3248 215 20 3 chr20 0 735 -72153147 + L1PA15-16 LINE L1 1867 2614 -4235 992 147 0 0 chr20 735 878 -72153004 + AluJo SINE Alu 1 143 -169 835 105 8 8 chr20 912 1045 -72152837 + L1PA15 LINE L1 6033 6165 0 502 273 17 17 chr20 1045 1221 -72152661 - L1MEc LINE L1 -4676 1720 1545 227 301 2 9 chr20 1673 1782 -72152100 + MIR3 SINE MIR 78 167 -41 247 158 35 53 chr20 1834 1891 -72151991 + MIR3 SINE MIR 108 163 -45 246 315 18 36 chr20 1927 2038 -72151844 + MER117 DNA MER1_type 74 182 -15 2322 84 3 3 chr20 2280 2578 -72151304 - AluSq SINE Alu -15 298 1 23 0 0 0 chr20 2590 2613 -72151269 + AT_rich Low_complexity Low_complexity 1 23 0 6979 127 14 6 chr20 3397 5026 -72148856 - L1MA2 LINE L1 0 6304 4664 3107 123 43 2 chr20 5028 5514 -72148368 + MER75 DNA T2_type 1 506 -8 206 62 31 0 chr20 5705 5737 -72148145 + (TC)n Simple_repeat Simple_repeat 1 33 0 261 0 0 0 chr20 7563 7592 -72146290 + (CA)n Simple_repeat Simple_repeat 2 30 0 341 308 47 86 chr20 7592 7826 -72146056 - L1ME LINE L1 -540 5581 5357 225 240 90 20 chr20 8164 8264 -72145618 - L1ME LINE L1 -251 5870 5764 35 24 0 0 chr20 8420 8462 -72145420 + AT_rich Low_complexity Low_complexity 1 42 0 234 341 12 12 chr20 8753 8838 -72145044 + L3 LINE CR1 1455 1539 -38 1654 283 61 6 chr20 9000 9711 -72144171 + L2 LINE L2 2417 3172 -141 1911 189 0 22 chr20 9761 10163 -72143719 - L1 LINE L1 -754 5392 5000 438 220 78 14 chr20 10188 10329 -72143553 + L2 LINE L2 3162 3311 -2 222 163 23 0 chr20 10753 10796 -72143086 + (TA)n Simple_repeat Simple_repeat 2 45 0 239 300 12 0 chr20 10834 10914 -72142968 + L2 LINE L2 2892 2972 -342 615 304 140 53 chr20 10967 11090 -72142792 + L2 LINE L2 1177 1288 -2026 2099 131 0 0 chr20 11090 11388 -72142494 - AluSc SINE Alu -11 298 1 615 304 140 53 chr20 11388 11659 -72142223 + L2 LINE L2 1288 1534 -1780 2304 98 10 3 chr20 11659 11964 -72141918 - AluSq SINE Alu -4 309 3 615 304 140 53 chr20 11964 12341 -72141541 + L2 LINE L2 1534 2016 -1298 2626 124 26 35 chr20 12820 13048 -72140834 - L1MA5 LINE L1 0 6300 6077 2050 151 15 18 chr20 13048 13386 -72140496 - MER1B DNA MER1_type 0 337 1 2626 124 26 35 chr20 13386 13616 -72140266 - L1MA5 LINE L1 -223 6077 5846 249 305 60 46 chr20 13719 13870 -72140012 + LTR16C LTR ERVL 323 475 -16 209 291 123 50 chr20 13894 14073 -72139809 + L2 LINE L2 2033 2224 -1090 2157 137 12 9 chr20 14074 14417 -72139465 - L1P LINE L1 -2289 3857 3514 214 255 0 0 chr20 14461 14508 -72139374 + CT-rich Low_complexity Low_complexity 1 47 0 2374 88 3 0 chr20 16022 16317 -72137565 - AluY SINE Alu -15 296 1 6667 73 24 0 chr20 16322 17573 -72136309 - L1PA8 LINE L1 -11 6161 4897 4410 106 12 5 chr20 17573 18236 -72135646 + L1P LINE L1 2119 2786 -3360 523 250 9 0 chr20 18434 18546 -72135336 + MER81 DNA DNA 1 113 -1 225 333 0 0 chr20 18855 18927 -72134955 + L2 LINE L2 3187 3258 -14 611 254 182 0 chr20 18985 19260 -72134622 + Charlie2 DNA MER1_type 1 325 -2457 415 265 19 52 chr20 19261 19472 -72134410 + Charlie2 DNA MER1_type 1855 2058 -804 * 948 264 74 7 chr20 19466 19872 -72134010 + Charlie2 DNA MER1_type 2380 2812 -50 2495 58 3 0 chr20 19971 20281 -72133601 - AluY SINE Alu 0 311 1 183 156 0 0 chr20 20627 20659 -72133223 + (TA)n Simple_repeat Simple_repeat 1 32 0 1579 123 67 15 chr20 20677 20946 -72132936 - L1PB4 LINE L1 -9 6147 5865 477 0 0 0 chr20 21307 21360 -72132522 + (TG)n Simple_repeat Simple_repeat 2 54 0 1524 203 81 13 chr20 21463 21848 -72132034 - L1M4 LINE L1 -899 5247 4837 1215 322 40 14 chr20 21857 22351 -72131531 + L1PA16 LINE L1 868 1374 -6200 12724 210 26 44 chr20 22817 28331 -72125551 + L1PA16 LINE L1 2182 7603 -1 2262 220 94 57 chr20 28398 28975 -72124907 - MER77 LTR ERV1 -7 598 1 5205 178 59 25 chr20 30591 31699 -72122183 - L1PA16 LINE L1 -6 6160 4954 2325 110 0 0 chr20 31699 32007 -72121875 - AluSg SINE Alu -2 308 1 5205 178 59 25 chr20 32007 32873 -72121009 - L1PA16 LINE L1 -1212 4954 4118 338 155 84 0 chr20 32878 32949 -72120933 - L1 LINE L1 -1888 4258 4182 1749 244 28 25 chr20 32984 33586 -72120296 - L1M4 LINE L1 -904 5242 4639 884 323 68 17 chr20 33619 34028 -72119854 + L1PBb LINE L1 8 437 -6412 363 364 67 18 chr20 34398 34563 -72119319 + L1PBb LINE L1 694 866 -5983 379 278 83 101 chr20 34601 34878 -72119004 + L1PBb LINE L1 796 1067 -5782 8181 157 95 10 chr20 35085 36776 -72117106 + L1PBb LINE L1 1040 2957 -3891 21 0 0 0 chr20 37622 37643 -72116239 + AT_rich Low_complexity Low_complexity 1 21 0 330 276 88 54 chr20 37724 37963 -72115919 - L1MDa LINE L1 -3987 2553 2307 276 256 116 39 chr20 38136 38343 -72115539 - L1MDa LINE L1 -3736 2804 2582 300 284 123 31 chr20 38544 38836 -72115046 - L1MDa LINE L1 -4640 2081 1763 354 273 169 8 chr20 38937 39186 -72114696 - HAL1 LINE L1 -1220 1287 999 304 297 187 29 chr20 39370 39616 -72114266 + HAL1 LINE L1 1613 1897 -610 248 273 140 47 chr20 40710 40860 -72113022 + MLT1J LTR MaLR 238 401 -110 336 266 35 18 chr20 41275 41388 -72112494 + L2 LINE L2 3199 3313 0 195 229 0 0 chr20 41644 41679 -72112203 - L3 LINE CR1 -93 1484 1450 725 276 126 37 chr20 41856 42709 -72111173 + L1MCc LINE L1 1129 2254 -4868 372 259 37 9 chr20 42724 42832 -72111050 + L1M3d LINE L1 1 111 -5780 3019 227 65 35 chr20 42837 44752 -72109130 + L1MCc LINE L1 2175 4145 -2796 2267 105 0 0 chr20 44760 45055 -72108827 - AluSg SINE Alu -15 295 1 392 283 27 36 chr20 45127 45346 -72108536 - L1M4 LINE L1 -3076 3070 2854 22 35 0 0 chr20 45346 45375 -72108507 + AT_rich Low_complexity Low_complexity 1 29 0 1230 265 51 14 chr20 45503 45668 -72108214 - L1M4 LINE L1 -3372 2774 2617 2306 80 3 13 chr20 45668 45969 -72107913 - AluSg SINE Alu -12 298 1 1230 265 51 14 chr20 45969 46237 -72107645 - L1M4 LINE L1 -3529 2617 2325 1308 125 41 108 chr20 46326 46485 -72107397 + L1MCa LINE L1 1164 1332 -5094 4908 55 16 0 chr20 46485 47107 -72106775 + L1PA8 LINE L1 5541 6172 0 1308 125 41 108 chr20 47107 47316 -72106566 + L1MCa LINE L1 1332 1507 -4919 5793 166 18 12 chr20 47393 48655 -72105227 - L1M1 LINE L1 -871 5432 4057 25026 29 15 1 chr20 48662 54708 -72099174 + L1PA2 LINE L1 1 6172 0 3244 169 35 27 chr20 54708 54776 -72099106 - L1M1 LINE L1 -2079 4067 4001 2282 99 6 10 chr20 54776 55089 -72098793 - AluSq SINE Alu -1 312 1 3244 169 35 27 chr20 55089 55795 -72098087 - L1M1 LINE L1 -2145 4001 3287 1133 164 55 14 chr20 55799 56165 -72097717 + L1M2 LINE L1 2647 3027 -3821 317 175 6 186 chr20 56193 56376 -72097506 + L1PBb LINE L1 711 860 -5344 1053 261 34 0 chr20 56392 56687 -72097195 + L1PA15-16 LINE L1 1265 1569 -5280 689 259 0 0 chr20 56667 56833 -72097049 + L1PA15-16 LINE L1 1336 1501 -5349 * 4654 238 24 76 chr20 56862 57675 -72096207 + L1PA15-16 LINE L1 1271 2125 -4724 2081 129 0 22 chr20 57675 58012 -72095870 - AluSx SINE Alu 0 312 1 4654 238 24 76 chr20 58012 59236 -72094646 + L1PA15-16 LINE L1 2125 3208 -3641 873 114 8 0 chr20 59237 59369 -72094513 + L1PB4 LINE L1 6016 6148 -8 430 215 15 74 chr20 59400 59535 -72094347 + L1ME1 LINE L1 5461 5587 -579 306 73 0 0 chr20 59536 59577 -72094305 + (T)n Simple_repeat Simple_repeat 1 41 0 1567 252 29 41 chr20 59743 60323 -72093559 + L1ME1 LINE L1 5588 6160 -6 357 314 43 24 chr20 62074 62402 -72091480 - L1ME4a LINE L1 -211 5910 5577 438 269 71 25 chr20 63093 63290 -72090592 + L2 LINE L2 3104 3309 -4 195 129 0 0 chr20 64295 64326 -72089556 + (CAA)n Simple_repeat Simple_repeat 1 31 0 821 214 65 0 chr20 64682 64850 -72089032 - MER5A DNA MER1_type -9 180 2 225 194 65 32 chr20 64963 65025 -72088857 - MIR SINE MIR -77 185 122 298 370 92 31 chr20 65691 66072 -72087810 + L2 LINE L2 2554 2957 -357 185 401 28 14 chr20 66623 66765 -72087117 + MIR SINE MIR 8 151 -111 299 362 97 16 chr20 67368 67553 -72086329 + MIR SINE MIR 5 204 -58 456 274 74 112 chr20 68105 68529 -72085353 + L1MDa LINE L1 505 855 -5685 4465 169 39 30 chr20 68774 69880 -72084002 - L1MA9 LINE L1 -30 6282 5167 1059 217 10 20 chr20 69881 70180 -72083702 + L1MA9 LINE L1 4849 5144 -1002 2821 198 90 57 chr20 70192 70243 -72083639 + L1MDa LINE L1 1227 1275 -5265 2317 98 0 19 chr20 70243 70558 -72083324 + AluY SINE Alu 1 309 -2 2821 198 90 57 chr20 70558 71382 -72082500 + L1MDa LINE L1 1275 2152 -4388 1503 159 53 4 chr20 71382 71646 -72082236 - AluJb SINE Alu -1 311 35 2821 198 90 57 chr20 71646 71923 -72081959 + L1MDa LINE L1 2152 2418 -4122 1046 262 36 13 chr20 71924 72221 -72081661 + L1MDa LINE L1 2479 2768 -3772 1708 140 70 7 chr20 72221 72507 -72081375 + AluJb SINE Alu 1 304 -8 1046 262 36 13 chr20 72507 72650 -72081232 + L1MDa LINE L1 2768 3078 -3462 * 1234 251 61 30 chr20 72645 73107 -72080775 + L1MD2 LINE L1 5631 6106 -253 434 223 19 0 chr20 73170 73273 -72080609 + MER3 DNA MER1_type 2 106 -103 632 250 36 12 chr20 73282 73450 -72080432 + MIR SINE MIR 88 259 -3 458 339 79 83 chr20 73502 73998 -72079884 - L1MEd LINE L1 -5373 746 253 329 305 63 26 chr20 74105 74418 -72079464 - L1MDa LINE L1 -3819 2721 2395 277 127 36 0 chr20 75010 75065 -72078817 - L1MB3 LINE L1 0 6183 6127 2832 118 42 16 chr20 75067 75566 -72078316 - L1MA5 LINE L1 0 6300 5789 239 133 22 0 chr20 75634 75679 -72078203 + (TA)n Simple_repeat Simple_repeat 2 47 0 574 176 0 0 chr20 75679 75781 -72078101 - L1 LINE L1 -1197 4949 4848 288 0 0 0 chr20 76629 76661 -72077221 + (TG)n Simple_repeat Simple_repeat 1 32 0 319 286 224 5 chr20 76666 76862 -72077020 + MIR SINE MIR 11 249 -13 192 40 0 0 chr20 78453 78478 -72075404 + (TTG)n Simple_repeat Simple_repeat 3 27 0 377 283 0 0 chr20 78807 78899 -72074983 + L1MD3 LINE L1 6805 6896 -1099 7387 30 0 0 chr20 78899 79814 -72074068 - L1PA2 LINE L1 -1932 4214 3300 9657 30 5 0 chr20 79816 81746 -72072136 + L1PA2 LINE L1 4222 6155 0 1827 199 147 104 chr20 81748 81970 -72071912 + L1MC3 LINE L1 6871 7082 -703 304 259 0 12 chr20 81970 82051 -72071831 + MLT1I LTR MaLR 35 114 -453 1827 199 147 104 chr20 82051 82619 -72071263 + L1MC3 LINE L1 7082 7778 -7 354 312 70 14 chr20 82692 83061 -72070821 - L1M4 LINE L1 -2576 3570 3181 470 246 53 91 chr20 83084 83166 -72070716 + MLT1I LTR MaLR 104 188 -221 2085 131 3 0 chr20 83166 83457 -72070425 + AluSx SINE Alu 7 298 -14 470 246 53 91 chr20 83457 83659 -72070223 + MLT1I LTR MaLR 188 377 -32 21 0 0 0 chr20 83662 83683 -72070199 + AT_rich Low_complexity Low_complexity 1 21 0 471 35 0 0 chr20 83772 83829 -72070053 + (CA)n Simple_repeat Simple_repeat 2 58 0 272 133 0 0 chr20 83874 83919 -72069963 - L1MB7 LINE L1 -31 6153 6109 293 308 48 10 chr20 83919 84127 -72069755 - L1M4 LINE L1 -3021 3125 2910 344 163 36 104 chr20 85189 85248 -72068634 + L1MEc LINE L1 2521 2582 -3958 2237 124 12 15 chr20 85248 85586 -72068296 + MER1B DNA MER1_type 1 337 0 344 163 36 104 chr20 85586 85678 -72068204 + L1MEc LINE L1 2582 2644 -3896 3799 189 72 31 chr20 85684 86298 -72067584 - L1MA9 LINE L1 -38 6274 5602 1458 187 48 31 chr20 86298 86587 -72067295 - AluJo SINE Alu -18 294 1 3799 189 72 31 chr20 86587 86952 -72066930 - L1MA9 LINE L1 -710 5602 5254 642 248 95 5 chr20 87010 87220 -72066662 + L1MEc LINE L1 2712 2940 -3600 2614 229 39 35 chr20 87223 87962 -72065920 + L1M3b LINE L1 1 742 -5539 496 273 9 90 chr20 87943 88188 -72065694 + L1M3b LINE L1 599 794 -5487 * 2100 203 107 39 chr20 88241 88858 -72065024 + L1MD2 LINE L1 5680 6338 -21 700 260 25 15 chr20 89201 89397 -72064485 - MLT1H LTR MaLR -196 353 156 560 133 0 50 chr20 89875 89995 -72063887 - L1PA15 LINE L1 0 6165 6052 289 132 0 0 chr20 90022 90075 -72063807 - L1MA9 LINE L1 -35 6277 6225 867 175 18 0 chr20 90155 90326 -72063556 - L1MA9 LINE L1 -45 6267 6094 2394 77 0 3 chr20 90336 90646 -72063236 - AluY SINE Alu -2 309 1 2112 133 0 0 chr20 90646 90948 -72062934 - AluSx SINE Alu -10 302 1 1099 82 0 0 chr20 90949 91083 -72062799 - AluSq/x SINE Alu -179 134 1 1510 164 40 0 chr20 91083 91381 -72062501 - L1MA9 LINE L1 -209 6103 5794 344 91 36 0 chr20 91383 91438 -72062444 + L1MA9 LINE L1 5731 5787 -393 3385 73 0 9 chr20 91469 91921 -72061961 + LTR7 LTR ERV1 1 448 -2 6478 97 28 41 chr20 91924 93481 -72060401 + HERVH LTR ERV1 1 1855 -5858 5393 107 1 9 chr20 93481 94334 -72059548 + HERVH LTR ERV1 2142 2987 -4726 855 134 13 0 chr20 94328 94477 -72059405 + HERVH LTR ERV1 3140 3290 -4423 * 3245 101 0 10 chr20 94467 94974 -72058908 + HERVH LTR ERV1 3492 3993 -3720 1261 89 0 0 chr20 94976 95156 -72058726 + HERVH LTR ERV1 4488 4667 -3046 * 13577 76 4 7 chr20 95152 97104 -72056778 + HERVH LTR ERV1 5769 7713 0 1872 74 4 11 chr20 97104 97373 -72056509 + LTR7 LTR ERV1 1 267 -183 4491 124 4 13 chr20 97475 98242 -72055640 + HERVH LTR ERV1 2228 2987 -4726 855 134 13 0 chr20 98236 98385 -72055497 + HERVH LTR ERV1 3140 3290 -4423 * 3245 101 0 10 chr20 98375 98882 -72055000 + HERVH LTR ERV1 3492 3993 -3720 1261 89 0 0 chr20 98884 99064 -72054818 + HERVH LTR ERV1 4488 4667 -3046 * 13651 74 4 7 chr20 99060 101012 -72052870 + HERVH LTR ERV1 5769 7713 0 3336 76 7 7 chr20 101012 101460 -72052422 + LTR7 LTR ERV1 1 448 -2 1092 189 5 5 chr20 101464 101670 -72052212 + L1PA16 LINE L1 5937 6142 -24 1885 156 20 3 chr20 101683 101978 -72051904 + AluJo SINE Alu 1 300 -12 3272 133 70 23 chr20 102012 102077 -72051805 - L1MA8 LINE L1 -170 6121 6061 2095 141 0 3 chr20 102077 102376 -72051506 - AluSq SINE Alu -12 301 4 3272 133 70 23 chr20 102376 102921 -72050961 - L1MA8 LINE L1 -230 6061 5482 * 4736 172 81 3 chr20 102916 103944 -72049938 - L1MA8 LINE L1 -1397 4749 3642 1558 121 4 0 chr20 104053 104302 -72049580 + L1MA4 LINE L1 6046 6295 -5 42 77 0 0 chr20 104303 104394 -72049488 + AT_rich Low_complexity Low_complexity 1 91 0 180 0 0 0 chr20 104400 104420 -72049462 + (TAAAA)n Simple_repeat Simple_repeat 4 23 0 180 0 0 0 chr20 105707 105727 -72048155 + (CA)n Simple_repeat Simple_repeat 2 21 0 11778 205 25 19 chr20 105826 106224 -72047658 + L1PA16 LINE L1 1802 2196 -3970 270 0 0 0 chr20 106224 106254 -72047628 + (GAAAA)n Simple_repeat Simple_repeat 1 30 0 11778 205 25 19 chr20 106254 110189 -72043693 + L1PA16 LINE L1 2196 6157 -9 284 340 61 46 chr20 111659 111856 -72042026 - MIR SINE MIR -52 210 11 183 80 0 0 chr20 113273 113298 -72040584 + (T)n Simple_repeat Simple_repeat 1 25 0 2638 40 0 0 chr20 113298 113624 -72040258 - LTR17 LTR ERV1 -454 326 1 2313 51 0 0 chr20 113624 113916 -72039966 - HERV17 LTR ERV1 0 8626 8335 285 51 0 0 chr20 113906 113945 -72039937 - HERV17 LTR ERV1 -1078 7548 7510 * 22620 47 1 3 chr20 113938 116774 -72037108 - HERV17 LTR ERV1 -2607 6019 3190 1378 103 0 0 chr20 117333 117507 -72036375 - AluSx SINE Alu -138 174 1 198 0 0 0 chr20 117511 117533 -72036349 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 220 342 26 44 chr20 118210 118324 -72035558 + L2 LINE L2 2992 3103 -169 369 43 0 0 chr20 118352 118399 -72035483 + (TG)n Simple_repeat Simple_repeat 1 47 0 5409 93 19 7 chr20 118401 119209 -72034673 - L1PA15 LINE L1 -6 7578 6762 3389 153 2 8 chr20 119208 119840 -72034042 - L1PA12 LINE L1 -1255 6310 5683 * 5906 94 9 48 chr20 119840 120424 -72033458 + L1PA12 LINE L1 6342 6947 -640 2184 121 0 3 chr20 120424 120729 -72033153 + AluSq SINE Alu 1 304 -9 5906 94 9 48 chr20 120729 121303 -72032579 + L1PA12 LINE L1 6947 7453 -134 2115 132 0 0 chr20 121303 121591 -72032291 + AluSx SINE Alu 1 288 -24 5906 94 9 48 chr20 121591 121721 -72032161 + L1PA12 LINE L1 7453 7587 0 1165 113 13 0 chr20 121746 121905 -72031977 - AluSq SINE Alu -7 306 146 11018 177 35 17 chr20 121911 124084 -72029798 - L1PA15 LINE L1 -5341 2224 12 2060 276 178 15 chr20 124084 124271 -72029611 - L2 LINE L2 -10 3303 3148 1943 122 52 0 chr20 124271 124559 -72029323 + AluSq SINE Alu 1 303 -10 2060 276 178 15 chr20 124559 125549 -72028333 - L2 LINE L2 -165 3148 1921 499 336 29 13 chr20 125570 125808 -72028074 - MIR SINE MIR -19 243 2 3335 59 2 0 chr20 126087 126508 -72027374 - L1PA5 LINE L1 0 6154 5733 4094 36 13 0 chr20 126508 127036 -72026846 + L1P LINE L1 4186 4720 -1426 2653 134 14 1 chr20 128308 128795 -72025087 + L1PA14 LINE L1 5631 6154 0 22 35 0 0 chr20 129516 129545 -72024337 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr20 129802 129823 -72024059 + AT_rich Low_complexity Low_complexity 1 21 0 254 186 20 88 chr20 129824 129926 -72023956 - L1ME LINE L1 -5069 1001 907 2792 256 57 26 chr20 129927 130892 -72022990 + L1M4 LINE L1 3197 4206 -1940 2195 117 8 8 chr20 130892 131250 -72022632 - L1MA3 LINE L1 0 6305 5948 2792 256 57 26 chr20 131250 131470 -72022412 + L1M4 LINE L1 4206 4418 -1728 309 208 72 13 chr20 132150 132267 -72021615 - MLT1I LTR MaLR -236 173 46 2223 149 8 0 chr20 132428 132790 -72021092 - MER47A DNA MER2_type -1 365 1 1809 159 28 7 chr20 132905 133188 -72020694 - AluJo SINE Alu -23 289 1 249 317 33 33 chr20 134113 134233 -72019649 - MIR SINE MIR -73 135 16 1010 203 20 0 chr20 134439 134636 -72019246 - MER105 DNA DNA -3 201 1 428 363 113 39 chr20 134911 135595 -72018287 + L2 LINE L2 227 1003 -2311 2262 65 0 4 chr20 135595 135871 -72018011 - AluY SINE Alu 0 311 37 428 363 113 39 chr20 135871 136140 -72017742 + L2 LINE L2 1003 1251 -2063 214 255 0 20 chr20 136180 136231 -72017651 + L2 LINE L2 3200 3249 -64 * 523 255 62 14 chr20 136203 136348 -72017534 + L2 LINE L2 3161 3312 -1 216 343 29 20 chr20 136399 136501 -72017381 - L2 LINE L2 -226 3046 2944 811 246 51 60 chr20 136742 137076 -72016806 + Charlie1a DNA MER1_type 1 331 -1124 626 260 46 23 chr20 137179 137398 -72016484 + MER93a LTR ERV1 61 284 -118 1118 152 0 0 chr20 137403 137568 -72016314 - AluJo/FRAM SINE Alu -15 297 133 1830 132 0 60 chr20 137569 137887 -72015995 - AluJb SINE Alu -13 299 1 616 118 0 36 chr20 137904 138014 -72015868 + MER93a LTR ERV1 297 402 0 1146 236 19 0 chr20 138016 138283 -72015599 + Charlie1a DNA MER1_type 344 615 -840 913 268 231 25 chr20 138283 138724 -72015158 + MLT1G1 LTR MaLR 56 587 -8 582 195 79 12 chr20 139229 139393 -72014489 + Charlie1 DNA MER1_type 1463 1637 -1124 181 299 21 52 chr20 140013 140110 -72013772 + MIR SINE MIR 89 182 -80 911 186 0 0 chr20 140145 140290 -72013592 + FAM SINE Alu 1 145 -40 360 148 0 0 chr20 140301 140362 -72013520 + (TG)n Simple_repeat Simple_repeat 2 62 0 337 235 15 125 chr20 140529 140665 -72013217 + L2 LINE L2 3192 3312 -1 2412 93 3 3 chr20 140921 141234 -72012648 - AluSq SINE Alu 0 313 1 930 216 64 0 chr20 141897 142101 -72011781 + L1M1 LINE L1 562 778 -6787 8079 170 42 35 chr20 142108 143914 -72009968 + L1M1 LINE L1 1680 3497 -4068 819 130 17 17 chr20 143925 144102 -72009780 + GA-rich Low_complexity Low_complexity 1 177 0 3920 194 9 6 chr20 144102 144130 -72009752 + L1M1 LINE L1 3464 3490 -4075 360 0 0 0 chr20 144130 144170 -72009712 + (GGAA)n Simple_repeat Simple_repeat 1 40 0 3920 194 9 6 chr20 144170 145134 -72008748 + L1M1 LINE L1 3490 4461 -3104 8090 119 14 4 chr20 145219 146496 -72007386 + HSMAR2 DNA Mariner 12 1301 -1 396 323 161 0 chr20 146544 146699 -72007183 - MER5A DNA MER1_type 0 189 10 292 247 84 97 chr20 146708 147328 -72006554 + L1M4 LINE L1 2876 3487 -2659 4358 79 7 19 chr20 148411 149029 -72004853 + L1PA12 LINE L1 5552 6161 -7 2227 100 0 17 chr20 149322 149621 -72004261 + AluSx SINE Alu 1 294 -18 1190 78 78 0 chr20 150315 150494 -72003388 - L1PA10 LINE L1 -20 6148 5956 299 219 14 14 chr20 150936 151009 -72002873 + MIR SINE MIR 78 150 -112 956 168 24 64 chr20 152784 152815 -72001067 - MER33 DNA MER1_type -2341 244 213 2372 97 3 0 chr20 152815 153114 -72000768 - AluSg SINE Alu -10 300 1 956 168 24 64 chr20 153114 153332 -72000550 - MER33 DNA MER1_type -2372 213 5 363 336 0 20 chr20 153429 153575 -72000307 + MIR SINE MIR 5 147 -115 830 169 0 0 chr20 153666 153814 -72000068 - L1MA10 LINE L1 -2 6332 6185 2870 159 224 32 chr20 153815 154350 -71999532 + L1 LINE L1 4217 4648 -1498 2291 59 3 21 chr20 154350 154682 -71999200 + AluY SINE Alu 1 327 0 2870 159 224 32 chr20 154682 154919 -71998963 + L1 LINE L1 4648 5138 -1008 357 226 11 11 chr20 155460 155553 -71998329 + MLT1J LTR MaLR 24 116 -395 1617 177 6 51 chr20 155795 156106 -71997776 + AluJo SINE Alu 1 297 -15 2327 114 0 0 chr20 156109 156417 -71997465 + AluSq SINE Alu 1 308 -5 9158 86 30 13 chr20 156657 156751 -71997131 + HSMAR1 DNA Mariner 1 92 -1195 2368 86 3 0 chr20 156751 157052 -71996830 - AluSp SINE Alu -11 302 1 9158 86 30 13 chr20 157052 158222 -71995660 + HSMAR1 DNA Mariner 92 1287 0 1803 185 45 24 chr20 158891 159269 -71994613 + MLT1B LTR MaLR 5 390 0 1074 164 0 44 chr20 159336 159519 -71994363 + FAM SINE Alu 1 175 0 2431 99 0 0 chr20 159566 159870 -71994012 - AluSq SINE Alu -9 304 1 451 255 60 0 chr20 160755 160904 -71992978 - MIR SINE MIR -23 239 82 2204 90 0 4 chr20 161191 161469 -71992413 + AluSg SINE Alu 26 302 -8 1096 140 12 0 chr20 161893 162057 -71991825 + AluSg/x SINE Alu 138 303 -9 307 314 164 5 chr20 162084 162291 -71991591 - MIR SINE MIR -15 247 8 2385 94 0 0 chr20 162401 162698 -71991184 + AluY SINE Alu 1 297 -14 457 340 69 13 chr20 163698 164089 -71989793 - L1ME4a LINE L1 -3 6118 5706 233 306 92 19 chr20 164708 164914 -71988968 + L1MC4a LINE L1 6047 6267 -1541 1820 213 104 65 chr20 165153 165453 -71988429 + L1MC5 LINE L1 6617 6904 -1057 3926 116 24 2 chr20 165453 166050 -71987832 + L1MA9 LINE L1 5701 6310 -2 1820 213 104 65 chr20 166050 166126 -71987756 + L1MC5 LINE L1 6904 6976 -985 2145 131 6 10 chr20 166126 166438 -71987444 + AluSx SINE Alu 1 311 -1 1820 213 104 65 chr20 166438 166829 -71987053 + L1MC5 LINE L1 6976 7415 -546 423 219 116 0 chr20 167460 167615 -71986267 + L1MC5 LINE L1 7475 7647 -314 27 49 0 0 chr20 167617 167658 -71986224 + AT_rich Low_complexity Low_complexity 1 41 0 2208 117 0 16 chr20 167686 167994 -71985888 - AluSx SINE Alu -9 303 1 3588 179 52 20 chr20 168010 168046 -71985836 - L1MA9 LINE L1 -37 6275 6242 285 29 0 0 chr20 168046 168080 -71985802 + (TA)n Simple_repeat Simple_repeat 1 34 0 261 0 0 0 chr20 168079 168108 -71985774 + (GA)n Simple_repeat Simple_repeat 2 30 0 * 3588 179 52 20 chr20 168080 168805 -71985077 - L1MA9 LINE L1 -70 6242 5519 665 249 25 35 chr20 168833 169034 -71984848 + L1MC5 LINE L1 7715 7913 -48 2603 102 14 3 chr20 169041 169412 -71984470 - THE1C LTR MaLR 0 375 1 180 0 0 0 chr20 169593 169613 -71984269 + (CA)n Simple_repeat Simple_repeat 1 20 0 1179 229 185 25 chr20 169665 170032 -71983850 - MLT1H LTR MaLR 0 549 124 498 33 0 0 chr20 170115 170175 -71983707 + (GGAA)n Simple_repeat Simple_repeat 3 62 0 343 273 113 7 chr20 170630 170780 -71983102 + L1M4 LINE L1 2875 3040 -3106 27 81 0 0 chr20 170943 171005 -71982877 + AT_rich Low_complexity Low_complexity 1 62 0 2221 112 0 3 chr20 171067 171362 -71982520 + AluSc SINE Alu 1 294 -15 2246 112 0 0 chr20 171413 171709 -71982173 + AluSq SINE Alu 1 296 -17 2398 102 0 0 chr20 171742 172046 -71981836 + AluSx SINE Alu 1 304 -8 2457 227 58 42 chr20 172250 172540 -71981342 - L1ME1 LINE L1 -15 6151 5867 2581 148 26 7 chr20 172540 172958 -71980924 + MSTA LTR MaLR 1 426 -2 2457 227 58 42 chr20 172958 173132 -71980750 - L1ME1 LINE L1 -299 5867 5697 2084 126 22 0 chr20 173132 173433 -71980449 + AluSx SINE Alu 1 307 0 2457 227 58 42 chr20 173433 173659 -71980223 - L1ME1 LINE L1 -469 5697 5448 200 158 40 53 chr20 173721 173797 -71980085 + A-rich Low_complexity Low_complexity 3 77 0 3649 167 60 19 chr20 173894 174575 -71979307 + MER67C LTR ERV1 2 710 0 375 23 0 0 chr20 174595 174639 -71979243 + (CA)n Simple_repeat Simple_repeat 1 44 0 478 217 104 17 chr20 174641 174756 -71979126 + MER50 LTR ERV1 10 134 -600 2126 131 0 0 chr20 174756 175053 -71978829 + AluSx SINE Alu 7 303 -9 1837 142 37 0 chr20 175053 175349 -71978533 - L1PB4 LINE L1 -233 5923 5617 1097 126 0 0 chr20 175350 175501 -71978381 + AluSg/x SINE Alu 146 296 -14 3741 117 36 6 chr20 175502 176050 -71977832 - MER4E-int LTR ERV1 -6193 565 1 1684 50 0 0 chr20 176050 176248 -71977634 - MER4E LTR ERV1 0 766 569 2982 87 36 42 chr20 176277 176575 -71977307 - MER4E LTR ERV1 -298 468 173 2445 74 0 0 chr20 176575 176874 -71977008 - AluY SINE Alu -12 299 1 2982 87 36 42 chr20 176874 177046 -71976836 - MER4E LTR ERV1 -593 173 1 278 124 0 169 chr20 177046 177133 -71976749 + MLT2C2 LTR ERVL 393 464 0 2857 103 81 48 chr20 177169 177243 -71976639 + L1MA5 LINE L1 5788 5858 -442 2071 127 18 26 chr20 177243 177583 -71976299 - MER1B DNA MER1_type 0 337 1 2857 103 81 48 chr20 177583 177682 -71976200 + L1MA5 LINE L1 5858 5952 -348 2329 98 3 0 chr20 177682 177979 -71975903 + AluSx SINE Alu 1 298 -14 2857 103 81 48 chr20 177979 178301 -71975581 + L1MA5 LINE L1 5952 6300 0 21 36 0 0 chr20 178301 178329 -71975553 + AT_rich Low_complexity Low_complexity 1 28 0 594 226 39 89 chr20 178380 178425 -71975457 + L1MC4 LINE L1 7688 7734 -308 252 0 0 0 chr20 178425 178453 -71975429 + (TA)n Simple_repeat Simple_repeat 2 29 0 594 226 39 89 chr20 178453 178664 -71975218 + L1MC4 LINE L1 7734 7931 -111 21 57 0 0 chr20 178796 178831 -71975051 + AT_rich Low_complexity Low_complexity 1 35 0 189 0 0 0 chr20 179161 179182 -71974700 + (TTTTG)n Simple_repeat Simple_repeat 5 25 0 539 29 14 0 chr20 179591 179660 -71974222 + (TAGA)n Simple_repeat Simple_repeat 1 70 0 209 83 28 0 chr20 179661 179697 -71974185 + (CATA)n Simple_repeat Simple_repeat 4 40 0 733 287 78 25 chr20 179777 180098 -71973784 - L1ME LINE L1 -297 5824 5487 191 130 0 22 chr20 180967 181013 -71972869 + (GA)n Simple_repeat Simple_repeat 2 46 0 819 286 68 53 chr20 182139 182593 -71971289 - LTR16B LTR ERVL -2 462 2 2027 224 13 35 chr20 183528 183792 -71970090 - L1ME2 LINE L1 -301 5863 5612 2191 73 4 18 chr20 183792 184106 -71969776 - AluSp SINE Alu 0 325 16 2027 224 13 35 chr20 184106 184357 -71969525 - L1ME2 LINE L1 -552 5612 5357 449 251 19 103 chr20 184379 184526 -71969356 + L1ME1 LINE L1 5915 6030 -136 2592 47 7 0 chr20 184526 184824 -71969058 + AluY SINE Alu 1 300 -11 449 251 19 103 chr20 184824 184947 -71968935 + L1ME1 LINE L1 6030 6162 -4 25 0 0 0 chr20 184949 184974 -71968908 + AT_rich Low_complexity Low_complexity 1 25 0 587 288 68 50 chr20 185086 185511 -71968371 + L1ME LINE L1 5289 5728 -393 * 3690 148 44 0 chr20 185499 186086 -71967796 + L1M1 LINE L1 1 613 -6952 384 22 0 0 chr20 186086 186131 -71967751 + (TG)n Simple_repeat Simple_repeat 1 45 0 254 32 0 0 chr20 186131 186162 -71967720 - AluYa5 SINE Alu -106 195 165 2599 179 155 22 chr20 186162 186755 -71967127 + MER52A LTR ERV1 1 672 -1083 38 0 0 0 chr20 186952 186990 -71966892 + AT_rich Low_complexity Low_complexity 1 38 0 33 0 0 0 chr20 187377 187410 -71966472 + AT_rich Low_complexity Low_complexity 1 33 0 2312 103 3 7 chr20 187620 187930 -71965952 - AluSg SINE Alu -1 309 1 1292 134 216 17 chr20 188218 188473 -71965409 + AluSg1 SINE Alu 2 302 0 1026 204 16 0 chr20 188483 188674 -71965208 + MLT1E2 LTR MaLR 272 465 -161 528 200 27 0 chr20 188834 188944 -71964938 - L1PBa LINE L1 -6316 547 435 * 758 219 6 0 chr20 188940 189100 -71964782 - L1PBa LINE L1 -6697 166 6 501 186 0 0 chr20 189123 189209 -71964673 - L1MA7 LINE L1 -342 5949 5864 262 287 114 31 chr20 189211 189535 -71964347 - L2 LINE L2 -133 3180 2830 253 301 93 26 chr20 189831 190024 -71963858 + HERVL74 LTR ERVL 3071 3276 -2409 959 158 113 0 chr20 190040 190217 -71963665 + L1PB4 LINE L1 5958 6154 -2 2379 82 7 0 chr20 190419 190722 -71963160 + AluSx SINE Alu 1 305 -7 1946 209 125 48 chr20 190952 191520 -71962362 + MER76 LTR ERV 6 629 -59 2025 150 0 0 chr20 191520 191814 -71962068 - AluJb SINE Alu -18 294 1 1946 209 125 48 chr20 191814 191877 -71962005 + MER76 LTR ERV 629 686 -2 564 242 13 46 chr20 191899 192052 -71961830 + MIR SINE MIR 61 208 -54 235 305 86 86 chr20 192175 192293 -71961589 + MLT1K LTR MaLR 125 242 -346 2150 130 0 7 chr20 192293 192594 -71961288 - AluSx SINE Alu -13 299 1 235 305 86 86 chr20 192594 192849 -71961033 + MLT1K LTR MaLR 241 498 -90 797 261 29 0 chr20 192958 193165 -71960717 - LTR16A LTR ERVL -8 442 230 492 208 0 0 chr20 193584 193690 -71960192 + GA-rich Low_complexity Low_complexity 2 107 0 423 83 0 0 chr20 194037 194097 -71959785 + (CA)n Simple_repeat Simple_repeat 1 60 0 295 233 242 0 chr20 194344 194464 -71959418 + MIR SINE MIR 114 262 0 533 306 82 64 chr20 194821 194968 -71958914 + L2 LINE L2 2214 2357 -957 1642 138 52 11 chr20 194968 195259 -71958623 - AluJo SINE Alu 0 305 4 533 306 82 64 chr20 195259 195585 -71958297 + L2 LINE L2 2357 2708 -606 1949 166 0 0 chr20 195585 195881 -71958001 - AluJb SINE Alu -16 296 1 533 306 82 64 chr20 195881 196121 -71957761 + L2 LINE L2 2708 2942 -372 260 228 0 0 chr20 196142 196199 -71957683 + MER5A DNA MER1_type 18 74 -115 2204 125 0 3 chr20 196200 196503 -71957379 + AluSx SINE Alu 1 302 -10 345 47 0 0 chr20 196503 196546 -71957336 + (GGGA)n Simple_repeat Simple_repeat 1 43 0 507 127 56 8 chr20 196546 196672 -71957210 + GA-rich Low_complexity Low_complexity 1 132 0 255 248 229 0 chr20 196672 196777 -71957105 + MER5A DNA MER1_type 61 189 0 401 230 11 0 chr20 197296 197383 -71956499 + L2 LINE L2 2976 3063 -209 2325 90 0 40 chr20 197402 197723 -71956159 - AluSg1 SINE Alu -1 308 1 245 341 0 0 chr20 197941 198026 -71955856 + GA-rich Low_complexity Low_complexity 3 87 0 221 275 106 56 chr20 198308 198450 -71955432 - MIR3 SINE MIR -12 196 48 285 288 42 17 chr20 200188 200306 -71953576 + MIR3 SINE MIR 12 132 -76 200 196 107 0 chr20 200505 200561 -71953321 + MIR SINE MIR 34 95 -113 399 188 135 0 chr20 200570 200666 -71953216 + MIR SINE MIR 36 144 -118 260 232 72 0 chr20 201157 201226 -71952656 + MIR SINE MIR 139 212 -50 993 106 0 0 chr20 201548 201728 -71952154 + (GGGA)n Simple_repeat Simple_repeat 1 180 0 21 57 0 0 chr20 202008 202043 -71951839 + GC_rich Low_complexity Low_complexity 1 35 0 327 285 79 18 chr20 202118 202283 -71951599 + MER104 DNA Tc2 6 180 0 2211 69 4 0 chr20 202296 202570 -71951312 + AluSg SINE Alu 1 275 -35 180 0 0 0 chr20 202576 202596 -71951286 + (TAA)n Simple_repeat Simple_repeat 2 21 0 182 189 54 0 chr20 202760 202797 -71951085 - MIR SINE MIR -153 109 71 456 256 89 49 chr20 203004 203250 -71950632 - MIR SINE MIR 0 262 7 464 328 22 6 chr20 203296 203476 -71950406 + MIR SINE MIR 10 192 -70 1711 194 0 3 chr20 203479 203765 -71950117 + AluJo SINE Alu 1 285 -27 205 40 0 0 chr20 203765 203790 -71950092 + (TAAA)n Simple_repeat Simple_repeat 2 104 0 1113 168 0 0 chr20 203797 203964 -71949918 + AluJo SINE Alu 120 286 -26 459 243 52 95 chr20 204159 204303 -71949579 - MIR SINE MIR 0 262 128 1636 176 48 4 chr20 204303 204575 -71949307 + AluJb SINE Alu 1 284 -28 459 243 52 95 chr20 204575 204640 -71949242 - MIR SINE MIR -134 128 62 546 328 74 11 chr20 204770 205054 -71948828 + L2 LINE L2 3012 3313 0 190 317 0 0 chr20 205092 205133 -71948749 + MIR SINE MIR 15 55 -207 2227 110 0 3 chr20 205195 205487 -71948395 + AluSx SINE Alu 1 291 -21 2275 112 0 0 chr20 205916 206210 -71947672 - AluSx SINE Alu -18 294 1 567 286 22 32 chr20 206328 206513 -71947369 + MIR SINE MIR 48 230 -32 249 270 0 0 chr20 207116 207179 -71946703 + MIR SINE MIR 6 68 -194 2081 119 14 3 chr20 207180 207465 -71946417 + AluSx SINE Alu 1 288 -24 23 33 0 0 chr20 207465 207495 -71946387 + AT_rich Low_complexity Low_complexity 1 30 0 768 278 0 28 chr20 207495 207707 -71946175 + MIR SINE MIR 57 262 0 1906 106 31 0 chr20 208224 208480 -71945402 - AluSq SINE Alu -49 264 1 337 143 14 0 chr20 208770 208840 -71945042 - L1MD2 LINE L1 0 6359 6289 2174 113 0 39 chr20 208841 209152 -71944730 + AluSx SINE Alu 1 299 -13 255 125 0 0 chr20 209152 209192 -71944690 + (GGGGA)n Simple_repeat Simple_repeat 1 40 0 4873 210 13 37 chr20 209215 210253 -71943629 - L1MC4a LINE L1 -27 7781 6720 2073 113 70 0 chr20 210253 210537 -71943345 + AluSx SINE Alu 1 304 -8 4873 210 13 37 chr20 210537 210919 -71942963 - L1MC4a LINE L1 -1088 6720 4825 297 232 11 11 chr20 211367 211462 -71942420 + MER20B DNA MER1_type 653 747 -36 465 230 141 1 chr20 211462 211591 -71942291 - MIR SINE MIR -62 146 40 1415 272 25 31 chr20 211636 212081 -71941801 + MLT1J2 LTR MaLR 1 442 -8 576 278 119 16 chr20 212315 212509 -71941373 + MIR SINE MIR 49 262 0 243 268 134 0 chr20 212683 212765 -71941117 - MIR SINE MIR -73 135 43 189 0 0 0 chr20 213170 213191 -71940691 + (T)n Simple_repeat Simple_repeat 1 21 0 1566 196 206 141 chr20 213462 213845 -71940037 + L2 LINE L2 1277 1634 -1680 687 228 0 24 chr20 213845 214012 -71939870 + AluJb SINE Alu 136 298 -14 1566 196 206 141 chr20 214012 214661 -71939221 + L2 LINE L2 1634 2553 -761 2417 88 0 13 chr20 215126 215433 -71938449 + AluSq SINE Alu 1 303 -10 803 268 78 70 chr20 215445 215922 -71937960 + MLT1L LTR MaLR 3 488 -127 1566 199 10 30 chr20 215922 216219 -71937663 + AluJo SINE Alu 1 291 -21 803 268 78 70 chr20 216219 216345 -71937537 + MLT1L LTR MaLR 488 611 -4 508 237 21 82 chr20 216355 216549 -71937333 + MLT1J LTR MaLR 330 511 0 2403 91 3 0 chr20 216680 216977 -71936905 - AluSp SINE Alu -15 298 1 784 301 96 16 chr20 217824 218368 -71935514 + L1M4 LINE L1 4117 4703 -1443 466 304 72 24 chr20 218383 218590 -71935292 + MER102a DNA MER1_type 108 324 -6 236 361 9 0 chr20 218739 218847 -71935035 - L2 LINE L2 -2482 832 724 2565 50 3 0 chr20 218998 219300 -71934582 + AluY SINE Alu 1 303 -8 266 222 198 24 chr20 219339 219465 -71934417 + MIR SINE MIR 96 243 -19 23 0 0 0 chr20 220117 220140 -71933742 + GC_rich Low_complexity Low_complexity 1 23 0 29 0 0 0 chr20 220249 220278 -71933604 + GC_rich Low_complexity Low_complexity 1 29 0 25 51 0 0 chr20 220407 220446 -71933436 + GC_rich Low_complexity Low_complexity 1 39 0 21 36 0 0 chr20 220651 220679 -71933203 + GC_rich Low_complexity Low_complexity 1 28 0 276 329 13 0 chr20 221774 221853 -71932029 + L2 LINE L2 3185 3264 -8 591 280 32 11 chr20 222093 222282 -71931600 - MIR3 SINE MIR 0 208 16 230 353 39 0 chr20 223126 223228 -71930654 + MER5B DNA MER1_type 66 171 -7 2373 93 0 0 chr20 224288 224579 -71929303 - AluSx SINE Alu -21 291 1 336 320 69 46 chr20 224607 224782 -71929100 - L2 LINE L2 -221 3051 2873 321 265 247 0 chr20 224878 225048 -71928834 - L2 LINE L2 0 3313 3102 947 326 64 29 chr20 225805 226364 -71927518 - L2 LINE L2 -513 2801 2223 595 212 72 63 chr20 226365 226587 -71927295 + MER112 DNA MER1_type 3 226 -34 322 319 47 0 chr20 226665 226834 -71927048 - L2 LINE L2 -1216 2098 1922 2582 44 7 0 chr20 226835 227130 -71926752 + AluY SINE Alu 1 297 -14 1535 132 0 14 chr20 227485 227697 -71926185 + AluSx SINE Alu 1 209 -103 4257 110 41 58 chr20 227763 228526 -71925356 + LTR1 LTR ERV1 36 785 0 598 106 0 21 chr20 228528 228622 -71925260 + AluSx SINE Alu 208 299 -13 1063 167 0 6 chr20 228842 229010 -71924872 - AluJo/FRAM SINE Alu -17 295 129 2307 60 0 106 chr20 229013 229361 -71924521 - AluY SINE Alu 0 311 1 476 176 0 38 chr20 229361 229492 -71924390 + CT-rich Low_complexity Low_complexity 1 126 0 760 201 145 52 chr20 229494 229743 -71924139 - AluJo SINE Alu 0 312 41 422 240 42 152 chr20 229772 229989 -71923893 + L1MC4a LINE L1 5834 6026 -1782 1741 165 33 0 chr20 230203 230508 -71923374 + AluJb SINE Alu 1 314 0 509 303 90 31 chr20 230763 231120 -71922762 + L2 LINE L2 2934 3311 -2 1553 269 95 15 chr20 231488 232034 -71921848 + MER115 DNA AcHobo 89 678 -15 475 248 65 13 chr20 232041 232194 -71921688 + MIR SINE MIR 63 223 -39 472 245 123 42 chr20 232346 232558 -71921324 - MIR SINE MIR -1 261 33 221 143 0 41 chr20 232732 232781 -71921101 + (TCCC)n Simple_repeat Simple_repeat 1 47 0 21 0 0 0 chr20 233326 233347 -71920535 + AT_rich Low_complexity Low_complexity 1 21 0 319 108 96 48 chr20 233861 233944 -71919938 - L1MC3 LINE L1 -6 7779 7693 1437 164 0 0 chr20 233949 234174 -71919708 - AluJb SINE Alu -4 308 84 885 157 8 111 chr20 234178 234413 -71919469 - L1MC3 LINE L1 -100 7685 7475 286 282 35 0 chr20 234488 234573 -71919309 - MLT1F1 LTR MaLR -443 124 37 2206 122 66 34 chr20 234574 234983 -71918899 - L1MC3 LINE L1 -687 7098 6677 213 39 0 0 chr20 234984 235010 -71918872 + (TCCC)n Simple_repeat Simple_repeat 1 26 0 282 191 0 0 chr20 235010 235057 -71918825 - Alu SINE Alu -11 290 244 269 160 0 0 chr20 235170 235220 -71918662 + MER97a DNA MER1_type? 45 94 -800 1401 150 8 43 chr20 235222 235456 -71918426 - AluJo SINE Alu -86 226 1 3095 178 64 31 chr20 235457 235861 -71918021 - L1MC3 LINE L1 -1093 6692 6303 2123 128 0 28 chr20 235861 236181 -71917701 - AluJb SINE Alu -1 311 1 3095 178 64 31 chr20 236181 236405 -71917477 - L1MC3 LINE L1 -1482 6303 5745 249 225 144 38 chr20 236405 236565 -71917317 - L1MB5 LINE L1 -122 6052 5876 210 268 98 18 chr20 236572 236684 -71917198 - MIR SINE MIR -69 193 73 927 181 23 0 chr20 236755 236926 -71916956 - FAM SINE Alu 0 175 1 240 232 18 18 chr20 236929 236985 -71916897 - Charlie5 DNA MER1_type -2547 65 10 2276 107 0 0 chr20 236993 237282 -71916600 - AluSc SINE Alu -20 289 1 904 179 0 0 chr20 237328 237473 -71916409 + FRAM SINE Alu 21 165 -11 1831 140 49 3 chr20 237509 237794 -71916088 - AluJo SINE Alu -5 307 10 2259 122 3 0 chr20 237797 238109 -71915773 - AluSp SINE Alu 0 313 1 2014 106 33 0 chr20 238334 238639 -71915243 - AluY SINE Alu 0 314 1 1936 149 17 3 chr20 238648 238937 -71914945 - AluJo SINE Alu -19 293 1 2040 128 12 53 chr20 238937 239336 -71914546 + L1MB8 LINE L1 5790 6172 -6 1934 150 3 14 chr20 239516 239810 -71914072 + AluJo SINE Alu 1 291 -21 498 296 18 6 chr20 239916 240085 -71913797 - L2 LINE L2 -252 3061 2891 438 240 7 52 chr20 240123 240153 -71913729 + L1ME LINE L1 5639 5669 -452 2190 112 11 0 chr20 240153 240280 -71913602 + AluSc SINE Alu 1 125 -184 2389 69 0 23 chr20 240280 240583 -71913299 + AluY SINE Alu 1 296 -15 2190 112 11 0 chr20 240583 240742 -71913140 + AluSc SINE Alu 125 290 -19 438 240 7 52 chr20 240742 240841 -71913041 + L1ME LINE L1 5669 5763 -358 1926 122 4 0 chr20 240841 241103 -71912779 + AluSq SINE Alu 35 297 -16 438 240 7 52 chr20 241103 241126 -71912756 + L1ME LINE L1 5763 5785 -336 1901 170 0 3 chr20 241277 241571 -71912311 + AluJb SINE Alu 1 293 -19 2265 98 0 17 chr20 241571 241868 -71912014 + AluSg SINE Alu 1 292 -18 2275 80 4 0 chr20 241968 242243 -71911639 + AluSx SINE Alu 1 276 -36 357 43 0 0 chr20 242243 242290 -71911592 + (CA)n Simple_repeat Simple_repeat 1 47 0 2262 110 3 0 chr20 242586 242878 -71911004 + AluSg SINE Alu 1 293 -17 2685 199 26 17 chr20 243044 243586 -71910296 - MLT1F1 LTR MaLR 0 567 21 2495 59 0 13 chr20 243587 243894 -71909988 + AluY SINE Alu 1 303 -8 571 269 161 34 chr20 244203 244349 -71909533 + L2 LINE L2 2911 3037 -276 1954 162 10 0 chr20 244349 244651 -71909231 - AluJb SINE Alu -7 305 1 571 269 161 34 chr20 244651 244666 -71909216 + L2 LINE L2 3037 3049 -264 1640 174 8 0 chr20 244666 244931 -71908951 - AluJo SINE Alu -45 267 1 571 269 161 34 chr20 244931 245121 -71908761 + L2 LINE L2 3049 3308 -5 1610 167 41 11 chr20 245389 245689 -71908193 - AluJb SINE Alu 0 314 7 1984 127 39 7 chr20 246153 246436 -71907446 - AluSx SINE Alu -16 296 5 402 258 86 0 chr20 246450 246578 -71907304 - MIR SINE MIR -14 248 110 33 85 0 0 chr20 248071 248153 -71905729 + GC_rich Low_complexity Low_complexity 1 82 0 33 25 0 0 chr20 248173 248213 -71905669 + GC_rich Low_complexity Low_complexity 1 40 0 31 26 0 0 chr20 248408 248446 -71905436 + GC_rich Low_complexity Low_complexity 1 38 0 30 69 0 0 chr20 248569 248627 -71905255 + GC_rich Low_complexity Low_complexity 1 58 0 22 56 0 0 chr20 248881 248917 -71904965 + GC_rich Low_complexity Low_complexity 1 36 0 23 0 0 0 chr20 248998 249021 -71904861 + GC_rich Low_complexity Low_complexity 1 23 0 25 0 0 0 chr20 249160 249185 -71904697 + GC_rich Low_complexity Low_complexity 1 25 0 195 114 0 0 chr20 249199 249234 -71904648 + (GGA)n Simple_repeat Simple_repeat 1 35 0 180 0 0 0 chr20 251127 251147 -71902735 + (T)n Simple_repeat Simple_repeat 1 20 0 579 248 189 4 chr20 251495 251765 -71902117 - MER102b DNA MER1_type -1 340 21 285 254 295 8 chr20 251802 251924 -71901958 + MIR SINE MIR 16 172 -90 706 264 100 47 chr20 252536 252877 -71901005 + LTR16A LTR ERVL 92 450 0 186 179 0 0 chr20 253212 253251 -71900631 + MIR SINE MIR 81 119 -89 1992 171 51 127 chr20 253561 254014 -71899868 - MLT1E1 LTR MaLR 0 654 273 2436 90 3 3 chr20 254014 254325 -71899557 + AluSx SINE Alu 1 311 -1 1992 171 51 127 chr20 254325 254579 -71899303 - MLT1E1 LTR MaLR -381 273 1 1029 174 0 34 chr20 254579 254755 -71899127 + AluJo SINE Alu 22 189 -123 1558 259 121 50 chr20 254760 255423 -71898459 + L2 LINE L2 2223 2982 -331 2062 123 3 7 chr20 255423 255724 -71898158 + AluSx SINE Alu 1 300 -12 1558 259 121 50 chr20 255724 255986 -71897896 + L2 LINE L2 2982 3224 -89 1770 148 7 20 chr20 256047 256345 -71897537 + AluJo SINE Alu 1 294 -18 319 364 52 44 chr20 256363 256613 -71897269 - L2 LINE L2 -26 3246 2995 1541 237 205 20 chr20 256613 257111 -71896771 + MLT1G LTR MaLR 1 590 0 829 173 0 0 chr20 257324 257457 -71896425 - FLAM_C SINE Alu 0 133 1 2134 121 0 0 chr20 257466 257763 -71896119 - AluSx SINE Alu -15 297 1 189 324 141 0 chr20 257765 257836 -71896046 + L2 LINE L2 2693 2773 -541 436 185 7 104 chr20 257989 258073 -71895809 + MIR3 SINE MIR 84 152 -56 2201 115 0 6 chr20 258073 258386 -71895496 - AluSx SINE Alu -1 311 1 436 185 7 104 chr20 258386 258436 -71895446 + MIR3 SINE MIR 152 205 -3 1214 56 11 11 chr20 258779 258957 -71894925 + (TTC)n Simple_repeat Simple_repeat 3 180 0 232 193 20 20 chr20 258968 258987 -71894895 - Alu SINE Alu -263 40 22 1666 109 4 0 chr20 258987 259225 -71894657 - AluSg/x SINE Alu 0 310 72 232 193 20 20 chr20 259225 259265 -71894617 - Alu SINE Alu -280 23 1 1887 146 0 10 chr20 259267 259568 -71894314 - AluSx SINE Alu -14 298 1 267 133 22 0 chr20 259568 259613 -71894269 - U6 snRNA snRNA -61 46 1 716 260 0 17 chr20 259655 259836 -71894046 - L2 LINE L2 0 3313 3136 476 239 89 33 chr20 259905 260085 -71893797 - LTR33A LTR ERVL -332 191 2 2225 78 3 0 chr20 260177 260459 -71893423 + AluSp SINE Alu 1 283 -30 4068 168 12 12 chr20 260513 261025 -71892857 - L1MB3 LINE L1 -11 6172 5658 1718 147 56 0 chr20 261025 261187 -71892695 - AluSx SINE Alu -11 301 115 390 21 0 0 chr20 261187 261234 -71892648 + (TG)n Simple_repeat Simple_repeat 2 48 0 1718 147 56 0 chr20 261234 261356 -71892526 - AluSx SINE Alu -197 115 1 4068 168 12 12 chr20 261356 261570 -71892312 - L1MB3 LINE L1 -524 5659 5446 1541 154 0 8 chr20 261616 261863 -71892019 - AluJo SINE Alu -47 265 21 2056 117 3 0 chr20 261939 262229 -71891653 + AluSq SINE Alu 1 291 -22 1229 91 24 62 chr20 262596 262806 -71891076 - AluSc SINE Alu -14 295 94 337 0 41 20 chr20 262806 262855 -71891027 + (TTTC)n Simple_repeat Simple_repeat 2 51 0 1967 134 40 0 chr20 262860 263158 -71890724 - AluSx SINE Alu 0 312 3 664 317 66 8 chr20 263282 263525 -71890357 - MIR SINE MIR 0 262 6 195 162 0 0 chr20 263722 263759 -71890123 + (CA)n Simple_repeat Simple_repeat 1 37 0 247 305 98 18 chr20 263800 263964 -71889918 + L2 LINE L2 1853 2029 -1285 368 141 16 0 chr20 264115 264179 -71889703 - AluJo SINE Alu -3 299 235 901 159 0 59 chr20 264179 264349 -71889533 - AluJo SINE Alu -152 160 1 741 237 133 37 chr20 264349 264807 -71889075 + MLT1G LTR MaLR 19 538 -4 976 236 167 25 chr20 264816 265134 -71888748 - MLT1A1 LTR MaLR -2 363 1 2326 97 0 3 chr20 265215 265526 -71888356 - AluSg SINE Alu 0 310 1 1235 275 154 9 chr20 265526 265974 -71887908 + MLT1K LTR MaLR 34 546 -42 300 70 0 0 chr20 266195 266238 -71887644 + (TC)n Simple_repeat Simple_repeat 1 43 0 2296 77 0 13 chr20 266424 266724 -71887158 + AluSc SINE Alu 1 296 -13 309 423 621 0 chr20 266839 267009 -71886873 - L1MC4a LINE L1 -302 5819 5795 2192 211 42 84 chr20 267009 267257 -71886625 - MLT1G LTR MaLR 0 590 333 1841 85 8 0 chr20 267257 267505 -71886377 - AluSx SINE Alu -62 250 1 2192 211 42 84 chr20 267505 267872 -71886010 - MLT1G LTR MaLR -257 333 1 309 423 621 0 chr20 267872 267934 -71885948 - L1MC4a LINE L1 -326 5795 5685 582 338 87 0 chr20 267934 268200 -71885682 + L2 LINE L2 2564 2852 -462 276 30 0 0 chr20 268242 268275 -71885607 + (CA)n Simple_repeat Simple_repeat 1 33 0 188 167 103 90 chr20 268275 268353 -71885529 + MIR SINE MIR 184 262 0 278 240 27 13 chr20 268364 268439 -71885443 - L2 LINE L2 -9 3304 3229 2068 134 0 6 chr20 268452 268766 -71885116 + AluJb SINE Alu 1 312 0 196 379 0 0 chr20 268896 268962 -71884920 - MIR SINE MIR -85 123 58 22 35 0 0 chr20 269663 269692 -71884190 + GC_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr20 270493 270514 -71883368 + GC_rich Low_complexity Low_complexity 1 21 0 396 0 0 0 chr20 271094 271138 -71882744 + (TG)n Simple_repeat Simple_repeat 2 45 0 587 341 0 0 chr20 271811 271978 -71881904 - MIR SINE MIR -83 179 13 236 210 48 0 chr20 272002 272064 -71881818 - MIR SINE MIR -11 251 187 228 222 25 62 chr20 272534 272615 -71881267 - MLT1K LTR MaLR -1 587 510 2118 109 3 10 chr20 272677 272802 -71881080 + AluSx SINE Alu 11 135 -177 2106 105 0 20 chr20 272802 273108 -71880774 + AluSg SINE Alu 1 300 -10 2118 109 3 10 chr20 273108 273286 -71880596 + AluSx SINE Alu 135 312 0 1995 126 0 0 chr20 273576 273861 -71880021 + AluSq SINE Alu 21 305 -8 1860 159 10 0 chr20 273874 274170 -71879712 + AluJo SINE Alu 13 311 -1 709 228 95 4 chr20 274188 274429 -71879453 + L1M4 LINE L1 4363 4625 -1521 185 129 0 0 chr20 274434 274465 -71879417 + L2 LINE L2 3023 3053 -260 279 319 129 0 chr20 274596 274712 -71879170 - MLT1K LTR MaLR -290 298 168 273 204 86 32 chr20 275097 275190 -71878692 - L2 LINE L2 -16 3256 3159 619 250 42 118 chr20 275205 275537 -71878345 - L2 LINE L2 0 3272 2966 235 308 13 0 chr20 276531 276609 -71877273 + MIR3 SINE MIR 82 160 -48 214 294 98 10 chr20 276813 276915 -71876967 - MIR SINE MIR -62 146 36 364 282 114 0 chr20 277536 277609 -71876273 - MIR SINE MIR -20 242 179 2157 109 3 0 chr20 277609 277913 -71875969 - AluSx SINE Alu -5 307 3 364 282 114 0 chr20 277913 277970 -71875912 - MIR SINE MIR -83 179 97 2269 64 0 58 chr20 277978 278307 -71875575 - AluY SINE Alu -1 310 1 1871 135 22 16 chr20 278317 278629 -71875253 - L1PB2 LINE L1 0 6151 5838 2238 100 0 0 chr20 278670 278969 -71874913 + AluSx SINE Alu 1 299 -13 334 277 25 34 chr20 279139 279258 -71874624 - MIR SINE MIR 0 262 145 * 1486 248 109 53 chr20 279250 280039 -71873843 + L2 LINE L2 2240 3074 -239 2278 97 3 0 chr20 280043 280354 -71873528 + AluSp SINE Alu 1 312 -1 2133 121 0 0 chr20 280366 280664 -71873218 + AluSx SINE Alu 1 298 -14 280 240 146 12 chr20 280689 280864 -71873018 + L1ME LINE L1 5571 5783 -338 1237 122 148 97 chr20 280865 281143 -71872739 + AluJo SINE Alu 1 292 -20 2048 101 50 0 chr20 281176 281474 -71872408 - AluSp SINE Alu 0 313 1 1006 146 5 61 chr20 281477 281632 -71872250 + L1MD3 LINE L1 7077 7218 -777 728 181 0 8 chr20 281632 281759 -71872123 - FLAM_A SINE Alu -7 126 1 1006 146 5 61 chr20 281759 281816 -71872066 + L1MD3 LINE L1 7218 7277 -718 640 240 0 0 chr20 281817 281942 -71871940 + MLT1F1 LTR MaLR 1 125 -442 1501 176 95 0 chr20 281942 282238 -71871644 + L1MD3 LINE L1 7404 7727 -268 406 200 20 59 chr20 282222 282323 -71871559 + L1MD3 LINE L1 6260 6351 -8 * 2278 96 0 0 chr20 282326 282627 -71871255 + AluSx SINE Alu 1 301 -11 2180 84 7 10 chr20 283020 283317 -71870565 - AluSp SINE Alu -17 296 1 401 275 101 57 chr20 283483 283664 -71870218 + MIR SINE MIR 67 262 0 257 364 11 0 chr20 283712 283800 -71870082 - L2 LINE L2 -68 3204 3116 584 308 87 0 chr20 283877 284072 -71869810 - MIR SINE MIR -21 241 30 2179 104 19 10 chr20 284512 284821 -71869061 + AluSx SINE Alu 1 312 0 255 294 176 0 chr20 284821 284923 -71868959 - MIR3 SINE MIR -85 123 4 197 222 16 0 chr20 285482 285545 -71868337 + (TGAA)n Simple_repeat Simple_repeat 3 66 0 1645 149 34 0 chr20 285563 285859 -71868023 - AluJb SINE Alu 0 311 7 250 327 73 0 chr20 285869 285979 -71867903 - L2 LINE L2 0 3272 3155 227 269 0 0 chr20 286094 286146 -71867736 + (TG)n Simple_repeat Simple_repeat 1 52 0 275 263 111 0 chr20 286580 286679 -71867203 + MIR SINE MIR 81 190 -72 1048 252 87 47 chr20 286955 287088 -71866794 - L2 LINE L2 -1 3312 3186 2059 115 0 10 chr20 287088 287392 -71866490 + AluSx SINE Alu 1 301 -11 1048 252 87 47 chr20 287392 287682 -71866200 - L2 LINE L2 -127 3186 2872 592 304 40 9 chr20 288367 288404 -71865478 + L1MC4a LINE L1 5406 5440 -2368 2160 83 0 14 chr20 288404 288694 -71865188 - AluSq SINE Alu -4 309 24 592 304 40 9 chr20 288694 288883 -71864999 + L1MC4a LINE L1 5440 5639 -2169 588 82 0 0 chr20 288921 289020 -71864862 + AluSp/q SINE Alu 211 309 0 774 259 50 29 chr20 289020 289314 -71864568 + L1MC4a LINE L1 5628 5945 -297 236 63 32 79 chr20 289460 289523 -71864359 + (TATAA)n Simple_repeat Simple_repeat 4 63 0 2105 91 0 7 chr20 289538 289860 -71864022 + AluSp SINE Alu 3 322 0 220 329 0 14 chr20 289968 290041 -71863841 + MIR SINE MIR 42 113 -95 2714 247 146 37 chr20 290354 290493 -71863389 + L2 LINE L2 1693 1815 -1498 1989 130 3 0 chr20 290493 290777 -71863105 - AluJb SINE Alu -27 285 1 2714 247 146 37 chr20 290777 290885 -71862997 + L2 LINE L2 1815 1910 -1403 2284 97 0 3 chr20 290885 291193 -71862689 - AluSc SINE Alu -2 307 1 2714 247 146 37 chr20 291193 291846 -71862036 + L2 LINE L2 1910 2491 -822 763 197 0 29 chr20 291846 291983 -71861899 + AluJo/FLAM SINE Alu 1 133 -169 2247 95 3 3 chr20 291985 292290 -71861592 + AluSx SINE Alu 1 305 -7 2714 247 146 37 chr20 292290 292705 -71861177 + L2 LINE L2 2491 2859 -454 1835 162 0 3 chr20 292705 293007 -71860875 - AluJb SINE Alu -11 301 1 2714 247 146 37 chr20 293007 293134 -71860748 + L2 LINE L2 2859 3313 0 614 264 35 25 chr20 293310 293507 -71860375 - L2 LINE L2 -1 3312 3114 225 83 0 0 chr20 294732 294768 -71859114 + (GGAA)n Simple_repeat Simple_repeat 3 38 0 534 277 40 30 chr20 295100 295152 -71858730 + MIR SINE MIR 11 61 -201 2004 107 21 0 chr20 295152 295433 -71858449 + AluSx SINE Alu 1 287 -25 534 277 40 30 chr20 295433 295582 -71858300 + MIR SINE MIR 61 214 -48 306 220 0 77 chr20 295692 295783 -71858099 - MIR SINE MIR 0 262 179 1044 174 0 0 chr20 295808 295975 -71857907 + AluJb SINE Alu 137 303 -9 192 77 0 0 chr20 295976 296002 -71857880 + (GGAA)n Simple_repeat Simple_repeat 1 26 0 324 316 86 7 chr20 296027 296166 -71857716 - MIR SINE MIR -85 177 28 * 396 279 105 23 chr20 296112 296284 -71857598 + MIR SINE MIR 11 196 -66 955 270 15 68 chr20 296588 296627 -71857255 + MER113 DNA MER1_type? 73 113 -408 275 48 0 24 chr20 296627 296669 -71857213 + (TTTA)n Simple_repeat Simple_repeat 4 44 0 1913 147 0 0 chr20 296669 296948 -71856934 - AluSx SINE Alu -33 279 1 955 270 15 68 chr20 296948 297191 -71856691 + MER113 DNA MER1_type? 112 366 -155 2054 88 36 20 chr20 297191 297311 -71856571 + AluY SINE Alu 1 118 -193 186 43 0 0 chr20 297311 297334 -71856548 + (CAA)n Simple_repeat Simple_repeat 2 24 0 2054 88 36 20 chr20 297334 297519 -71856363 + AluY SINE Alu 118 311 0 955 270 15 68 chr20 297519 297538 -71856344 + MER113 DNA MER1_type? 366 384 -137 2233 98 3 0 chr20 297538 297844 -71856038 + AluY SINE Alu 1 307 -4 955 270 15 68 chr20 297844 298013 -71855869 + MER113 DNA MER1_type? 384 521 0 301 284 17 60 chr20 298022 298138 -71855744 - MIR3 SINE MIR -48 160 50 1906 132 0 16 chr20 298351 298686 -71855196 + AluSx SINE Alu 1 312 0 612 203 23 0 chr20 298856 298984 -71854898 - MIR SINE MIR -44 218 88 250 280 40 0 chr20 299038 299113 -71854769 - MIR SINE MIR -68 194 117 2349 147 45 33 chr20 299248 299670 -71854212 - MSTC LTR MaLR -1 427 1 378 197 0 51 chr20 299670 299757 -71854125 + Charlie5 DNA MER1_type 18 99 -2525 2159 119 0 0 chr20 299757 300060 -71853822 - AluSg SINE Alu -7 303 1 378 197 0 51 chr20 300060 300089 -71853793 + Charlie5 DNA MER1_type 99 128 -2496 210 256 93 116 chr20 300236 300282 -71853600 + MIR SINE MIR 24 70 -192 2201 98 7 3 chr20 300282 300588 -71853294 - AluSq SINE Alu -6 307 1 210 256 93 116 chr20 300588 300670 -71853212 + MIR SINE MIR 70 149 -113 312 323 31 0 chr20 300887 300983 -71852899 + L2 LINE L2 3136 3234 -38 1825 138 7 3 chr20 301299 301613 -71852269 - AluY SINE Alu 0 315 1 1547 199 13 0 chr20 301623 301930 -71851952 - AluJo SINE Alu -1 311 1 2292 86 10 0 chr20 301997 302298 -71851584 + AluSp SINE Alu 1 304 -9 794 308 43 0 chr20 302424 302658 -71851224 - MIR SINE MIR -17 245 2 222 320 78 39 chr20 302924 303014 -71850868 - MIR SINE MIR -64 198 100 2564 30 3 0 chr20 303014 303318 -71850564 + AluY SINE Alu 1 305 -6 222 320 78 39 chr20 303318 303355 -71850527 - MIR SINE MIR -162 100 66 21 0 0 0 chr20 303428 303449 -71850433 + GC_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr20 303738 303759 -71850123 + GC_rich Low_complexity Low_complexity 1 21 0 23 54 0 0 chr20 303807 303844 -71850038 + GC_rich Low_complexity Low_complexity 1 37 0 267 31 0 0 chr20 304709 304741 -71849141 + (TG)n Simple_repeat Simple_repeat 1 32 0 530 282 56 39 chr20 305199 305433 -71848449 - MIR SINE MIR -2 260 23 675 272 75 54 chr20 305773 306049 -71847833 - L1MC4a LINE L1 -1924 5884 5597 1413 196 41 0 chr20 306049 306349 -71847533 - AluJo SINE Alu 0 311 1 675 272 75 54 chr20 306349 306420 -71847462 - L1MC4a LINE L1 -2211 5597 5529 270 304 131 52 chr20 306543 306897 -71846985 + L2 LINE L2 2395 2720 -594 1415 247 122 26 chr20 306897 306966 -71846916 - MLT1J LTR MaLR 0 511 450 2310 98 0 0 chr20 306966 307271 -71846611 - AluSc SINE Alu -4 305 1 1415 247 122 26 chr20 307271 307667 -71846215 - MLT1J LTR MaLR -61 450 1 270 304 131 52 chr20 307667 307713 -71846169 + L2 LINE L2 2720 2761 -553 2306 97 0 0 chr20 307713 308022 -71845860 - AluSp SINE Alu -4 309 1 270 304 131 52 chr20 308022 308117 -71845765 + L2 LINE L2 2761 2930 -384 744 181 103 0 chr20 308137 308292 -71845590 + MER5A DNA MER1_type 19 189 0 332 314 48 8 chr20 308317 308441 -71845441 + L2 LINE L2 2985 3113 -159 1747 148 20 33 chr20 308470 308773 -71845109 - AluJb SINE Alu -13 299 1 1203 102 0 0 chr20 309028 309185 -71844697 - AluSg/x SINE Alu -22 288 132 1931 103 4 0 chr20 309185 309448 -71844434 - AluSg SINE Alu -15 295 32 1198 111 0 12 chr20 309488 309660 -71844222 - AluSg SINE Alu -140 170 1 1216 187 21 17 chr20 309703 309938 -71843944 + AluJo SINE Alu 1 236 -76 1081 277 34 47 chr20 309995 310056 -71843826 - L1MC4a LINE L1 -1838 5970 5910 596 163 106 41 chr20 310056 310179 -71843703 + FLAM_A SINE Alu 1 131 -2 1081 277 34 47 chr20 310179 310561 -71843321 - L1MC4a LINE L1 -1898 5910 5533 355 317 42 6 chr20 311172 311339 -71842543 - L2 LINE L2 -264 3008 2836 302 299 0 21 chr20 311453 311550 -71842332 - MIR3 SINE MIR -33 175 81 611 291 27 18 chr20 311712 311932 -71841950 - MIR SINE MIR -19 243 22 406 255 161 0 chr20 312505 312654 -71841228 - L2 LINE L2 0 3313 3141 2369 84 0 3 chr20 312654 312964 -71840918 + AluSq SINE Alu 1 309 -4 494 270 172 47 chr20 313298 313329 -71840553 + MIR SINE MIR 5 31 -231 2249 108 0 0 chr20 313329 313634 -71840248 + AluSx SINE Alu 1 305 -7 494 270 172 47 chr20 313634 313817 -71840065 + MIR SINE MIR 31 246 -16 2286 97 0 0 chr20 314349 314647 -71839235 + AluSx SINE Alu 1 298 -14 750 163 81 12 chr20 314758 314918 -71838964 - MIR SINE MIR -74 188 18 197 256 125 0 chr20 314954 315028 -71838854 + MIR SINE MIR 73 156 -52 2081 123 0 3 chr20 315167 315467 -71838415 - AluSx SINE Alu -13 299 1 2607 192 88 40 chr20 315647 315947 -71837935 - L1MC4a LINE L1 0 7808 7524 1824 133 54 0 chr20 315947 316226 -71837656 - AluJo SINE Alu -18 294 1 2607 192 88 40 chr20 316226 316628 -71837254 - L1MC4a LINE L1 -284 7524 7072 2141 101 47 0 chr20 316628 316924 -71836958 - AluSg SINE Alu 0 310 1 1929 152 3 7 chr20 317122 317425 -71836457 + AluJo SINE Alu 11 312 0 486 248 36 15 chr20 317433 317570 -71836312 + MIR3 SINE MIR 6 145 -63 2047 117 3 7 chr20 317772 318070 -71835812 - AluJb SINE Alu -15 297 1 261 246 58 0 chr20 318597 318666 -71835216 + MIR SINE MIR 72 144 -118 405 228 22 11 chr20 319480 319572 -71834310 - L2 LINE L2 -24 3289 3197 336 243 37 37 chr20 320389 320525 -71833357 - MLT1L LTR MaLR -48 567 432 993 201 56 26 chr20 320618 320852 -71833030 + MIR SINE MIR 12 252 -10 2209 66 3 30 chr20 320858 321160 -71832722 + AluSg SINE Alu 1 294 -16 379 236 22 0 chr20 321193 321282 -71832600 - MLT1L LTR MaLR -344 271 181 416 208 27 167 chr20 321427 321580 -71832302 + MLT1H LTR MaLR 360 474 -75 2237 81 0 28 chr20 321580 321900 -71831982 - AluSx SINE Alu -1 311 1 416 208 27 167 chr20 321900 321967 -71831915 + MLT1H LTR MaLR 474 549 0 336 333 56 0 chr20 322208 322316 -71831566 - MIR SINE MIR -69 193 80 2236 91 0 0 chr20 322416 322713 -71831169 + AluSx SINE Alu 1 297 -15 303 266 245 29 chr20 322944 323083 -71830799 - L2 LINE L2 0 3272 3104 295 197 167 0 chr20 323149 323215 -71830667 + MLT1J2 LTR MaLR 67 143 -307 341 235 136 15 chr20 323290 323422 -71830460 + MLT1J2 LTR MaLR 299 446 -4 469 284 297 3 chr20 323510 323823 -71830059 - MLT1H LTR MaLR -72 477 73 3152 159 23 14 chr20 323850 324016 -71829866 - MER44D DNA MER2_type -1882 705 542 2450 75 0 0 chr20 324016 324324 -71829558 + AluSc SINE Alu 1 308 -1 3152 159 23 14 chr20 324324 324773 -71829109 - MER44D DNA MER2_type -2045 542 8 778 93 0 0 chr20 325011 325118 -71828764 + AluSp/q SINE Alu 207 313 0 1493 143 42 23 chr20 325124 325389 -71828493 - AluJo SINE Alu -31 281 12 460 289 102 0 chr20 325407 325573 -71828309 + MER5A DNA MER1_type 7 189 0 608 235 184 0 chr20 325789 325985 -71827897 + L2 LINE L2 3082 3313 0 218 328 0 0 chr20 326044 326105 -71827777 - MIR SINE MIR -19 243 183 2454 206 23 15 chr20 326114 326637 -71827245 + MLT1F LTR MaLR 16 542 0 511 268 33 13 chr20 326638 326791 -71827091 - MIR SINE MIR -78 184 29 624 290 65 81 chr20 326952 327052 -71826830 + L1MEd LINE L1 800 900 -5305 2064 101 0 10 chr20 327052 327350 -71826532 + AluSq SINE Alu 1 295 -18 624 290 65 81 chr20 327350 327483 -71826399 + L1MEd LINE L1 900 1034 -5171 2137 89 0 7 chr20 327483 327765 -71826117 + AluSq SINE Alu 1 280 -33 288 0 0 0 chr20 327765 327797 -71826085 + (CA)n Simple_repeat Simple_repeat 1 32 0 624 290 65 81 chr20 327797 327871 -71826011 + L1MEd LINE L1 1032 1104 -5101 361 223 210 64 chr20 327868 328025 -71825857 + L1MEd LINE L1 1333 1512 -4884 * 285 147 35 198 chr20 328048 328164 -71825718 + L1MB7 LINE L1 5814 5910 -264 498 92 0 0 chr20 328174 328239 -71825643 - AluJb SINE Alu -20 292 228 1129 119 0 0 chr20 328239 328398 -71825484 - AluJb SINE Alu -149 163 5 1028 178 40 36 chr20 328403 328541 -71825341 + L1MB7 LINE L1 5909 6045 -139 2050 148 0 0 chr20 328541 328852 -71825030 - AluSx SINE Alu -1 311 1 1028 178 40 36 chr20 328852 328988 -71824894 + L1MB7 LINE L1 6045 6184 0 1521 127 107 8 chr20 329089 329342 -71824540 + AluJo SINE Alu 29 306 -6 233 186 0 0 chr20 329346 329389 -71824493 - MER5B DNA MER1_type -135 43 1 1010 296 125 23 chr20 329447 330188 -71823694 - L2 LINE L2 0 3313 2476 192 310 36 0 chr20 330326 330435 -71823447 + MIR SINE MIR 80 140 -68 405 50 30 69 chr20 330543 330644 -71823238 + (CCCCG)n Simple_repeat Simple_repeat 2 98 0 788 278 200 10 chr20 331711 332218 -71821664 + L2 LINE L2 2698 3313 0 259 326 0 11 chr20 332285 332374 -71821508 - L2 LINE L2 -213 3059 2972 471 303 58 0 chr20 332690 332845 -71821037 + MIR SINE MIR 19 182 -80 604 293 156 50 chr20 332897 333256 -71820626 - MLT1J LTR MaLR -88 423 27 181 262 131 0 chr20 333272 333333 -71820549 + MIR SINE MIR 179 247 -15 4388 162 44 39 chr20 333444 333807 -71820075 - L1MB7 LINE L1 0 6184 5824 1455 191 23 43 chr20 333807 333961 -71819921 - AluJo SINE Alu -19 293 146 2324 64 0 3 chr20 333961 334257 -71819625 - AluY SINE Alu -16 295 1 1455 191 23 43 chr20 334257 334401 -71819481 - AluJo SINE Alu -166 146 1 4388 162 44 39 chr20 334401 334910 -71818972 - L1MB7 LINE L1 -360 5824 5319 2127 100 10 3 chr20 334910 335209 -71818673 - AluSx SINE Alu -11 301 1 4388 162 44 39 chr20 335209 336011 -71817871 - L1MB7 LINE L1 -865 5319 4515 342 200 111 22 chr20 336014 336104 -71817778 - HAL1b LINE L1 -442 906 809 203 250 0 0 chr20 336249 336289 -71817593 + MER5A DNA MER1_type 70 109 -80 1261 209 62 4 chr20 336750 337008 -71816874 + AluJb SINE Alu 30 302 -10 337 214 125 0 chr20 337491 337603 -71816279 - HAL1 LINE L1 -838 1669 1544 643 250 122 39 chr20 337603 337684 -71816198 - L1MC5 LINE L1 -176 7785 7712 1676 174 27 3 chr20 337684 337982 -71815900 + AluJo SINE Alu 1 305 -7 643 250 122 39 chr20 337982 338266 -71815616 - L1MC5 LINE L1 -249 7712 7376 2098 174 62 10 chr20 338266 338669 -71815213 - MSTA LTR MaLR 0 428 5 643 250 122 39 chr20 338669 338738 -71815144 - L1MC5 LINE L1 -585 7376 7314 2131 68 0 18 chr20 338745 339024 -71814858 - AluY SINE Alu -11 300 27 396 359 92 9 chr20 339032 339249 -71814633 - HAL1 LINE L1 -1428 1079 845 1525 170 40 7 chr20 339308 339585 -71814297 + AluJb SINE Alu 1 286 -26 660 244 51 15 chr20 339605 339802 -71814080 + MIR SINE MIR 56 259 -3 218 307 123 9 chr20 339810 339924 -71813958 - L2 LINE L2 -448 2866 2740 252 0 0 0 chr20 339986 340014 -71813868 + (TG)n Simple_repeat Simple_repeat 1 28 0 230 246 0 29 chr20 340247 340316 -71813566 + CT-rich Low_complexity Low_complexity 1 67 0 295 210 51 27 chr20 340718 340830 -71813052 + MIR SINE MIR 43 156 -78 1536 183 210 44 chr20 340855 340962 -71812920 - L1MC4 LINE L1 0 8042 7954 2539 37 0 0 chr20 340962 341258 -71812624 - AluY SINE Alu -15 296 1 1536 183 210 44 chr20 341258 341692 -71812190 - L1MC4 LINE L1 -88 7954 7411 326 47 0 82 chr20 343366 343451 -71810431 + (CCCCCA)n Simple_repeat Simple_repeat 6 83 0 329 326 42 0 chr20 343829 343973 -71809909 - MIR SINE MIR -67 195 46 250 272 233 26 chr20 344155 344664 -71809218 - L2 LINE L2 -84 3229 2553 661 162 0 0 chr20 345022 345127 -71808755 - FLAM_C SINE Alu -1 142 38 300 313 114 20 chr20 345223 345255 -71808627 + MIR SINE MIR 3 31 -231 1577 139 56 63 chr20 345255 345557 -71808325 + AluJb SINE Alu 1 300 -12 300 313 114 20 chr20 345557 345725 -71808157 + MIR SINE MIR 31 222 -40 2204 81 3 0 chr20 345727 346011 -71807871 + AluSp SINE Alu 3 287 -26 321 221 139 0 chr20 346057 346143 -71807739 - MLT1H LTR MaLR 0 595 498 1207 142 25 0 chr20 346245 346449 -71807433 - MER2 DNA MER2_type -135 210 2 546 251 93 57 chr20 346451 346785 -71807097 - MLT1H LTR MaLR -96 453 108 307 244 56 0 chr20 346918 347008 -71806874 + MIR3 SINE MIR 66 160 -48 2254 102 0 0 chr20 347715 348018 -71805864 - AluSx SINE Alu -9 303 1 324 263 38 2 chr20 348040 348152 -71805730 - L1ME2 LINE L1 -5 6161 6045 353 345 60 32 chr20 348275 348331 -71805551 - L1ME LINE L1 -382 5739 5686 2145 123 0 0 chr20 348331 348632 -71805250 - AluSg SINE Alu -9 301 1 353 345 60 32 chr20 348632 348781 -71805101 - L1ME LINE L1 -435 5686 5523 3450 116 41 0 chr20 348781 349298 -71804584 - L1MA2 LINE L1 0 6304 5767 353 345 60 32 chr20 349298 349343 -71804539 - L1ME LINE L1 -598 5523 5481 911 78 39 0 chr20 349349 349477 -71804405 - L1MB3 LINE L1 0 6183 6051 1583 174 3 43 chr20 349524 349846 -71804036 - AluJo SINE Alu -3 309 1 210 342 26 13 chr20 350361 350513 -71803369 + (CCCCAG)n Simple_repeat Simple_repeat 5 158 0 346 203 0 0 chr20 350922 350981 -71802901 + AluSp SINE Alu 131 189 -114 212 113 170 19 chr20 350999 351052 -71802830 + MIR SINE MIR 83 143 -65 1338 201 108 25 chr20 351860 351934 -71801948 + MER58B DNA MER1_type 2 68 -2352 2325 78 3 0 chr20 351934 352228 -71801654 - AluSp SINE Alu -13 300 6 1338 201 108 25 chr20 352228 352467 -71801415 + MER58B DNA MER1_type 68 341 0 520 314 69 16 chr20 352470 352715 -71801167 + MIR SINE MIR 5 262 0 476 250 74 69 chr20 354743 354959 -71798923 + Charlie8 DNA MER1_type 49 265 -2152 445 244 76 130 chr20 356360 356675 -71797207 - MER21B LTR ERV1 -158 705 408 2387 63 7 0 chr20 356709 357009 -71796873 - AluSq SINE Alu -11 302 1 443 213 53 142 chr20 357070 357295 -71796587 - MER21B LTR ERV1 -658 205 1 2664 170 147 98 chr20 357898 358769 -71795113 - MER21A LTR ERV1 -17 914 1 2217 106 0 3 chr20 359538 359849 -71794033 + AluSx SINE Alu 1 310 -2 454 161 43 11 chr20 362687 362780 -71791102 - MER103 DNA DNA -57 109 14 2066 103 10 3 chr20 363517 363809 -71790073 + AluSp SINE Alu 2 295 -18 21 0 0 0 chr20 363824 363845 -71790037 + AT_rich Low_complexity Low_complexity 1 21 0 1555 221 107 94 chr20 364927 365523 -71788359 + L1MC4 LINE L1 7323 7931 -111 2194 77 0 10 chr20 365523 365820 -71788062 + AluY SINE Alu 1 294 -17 1555 221 107 94 chr20 365820 365934 -71787948 + L1MC4 LINE L1 7931 8042 0 2035 98 7 24 chr20 366559 366854 -71787028 + AluSq SINE Alu 11 300 -13 182 156 22 0 chr20 367258 367303 -71786579 + (TTTA)n Simple_repeat Simple_repeat 3 48 0 2067 114 14 0 chr20 369056 369346 -71784536 - AluSx SINE Alu -16 296 3 1319 190 133 0 chr20 369376 369639 -71784243 - AluJo SINE Alu -4 298 1 2094 104 0 41 chr20 369651 369967 -71783915 - AluSg1 SINE Alu -6 303 1 759 289 191 48 chr20 370537 371602 -71782280 + L2 LINE L2 1758 2974 -340 236 200 53 80 chr20 371786 371861 -71782021 + L2 LINE L2 3185 3257 -15 206 326 128 29 chr20 372009 372181 -71781701 + L3 LINE CR1 875 1063 -514 225 301 62 35 chr20 372347 372460 -71781422 + MIR3 SINE MIR 93 208 0 212 287 121 57 chr20 372986 373474 -71780408 + L2 LINE L2 1697 2215 -1099 776 216 24 61 chr20 373505 373718 -71780164 + MER58A DNA MER1_type 19 223 -1 2265 101 0 3 chr20 374058 374364 -71779518 - AluSx SINE Alu -7 305 1 278 280 0 47 chr20 374440 374547 -71779335 + L2 LINE L2 2992 3093 -179 2176 97 0 3 chr20 374895 375194 -71778688 - AluSq SINE Alu -15 298 1 335 323 31 0 chr20 375493 375589 -71778293 + L2 LINE L2 3136 3234 -38 1812 106 25 21 chr20 375905 376219 -71777663 - AluY SINE Alu 0 315 1 413 251 29 12 chr20 376249 376420 -71777462 - AluJb SINE Alu -21 291 118 333 287 61 17 chr20 376585 376700 -71777182 - L1M4 LINE L1 -2946 3200 3081 289 368 0 23 chr20 376709 376842 -71777040 + CT-rich Low_complexity Low_complexity 6 135 0 2164 119 0 6 chr20 376980 377292 -71776590 + AluSx SINE Alu 3 312 0 2259 94 0 0 chr20 378011 378309 -71775573 + AluSg SINE Alu 1 298 -12 653 193 0 0 chr20 378309 378423 -71775459 - FLAM_A SINE Alu -18 115 2 2024 92 13 23 chr20 378444 378747 -71775135 - AluSg SINE Alu -10 300 1 995 63 0 0 chr20 378756 378882 -71775000 - AluSc SINE Alu -12 297 172 180 0 0 0 chr20 378888 378908 -71774974 + (A)n Simple_repeat Simple_repeat 1 20 0 2239 101 0 3 chr20 378917 379225 -71774657 + AluSg SINE Alu 1 307 -3 340 291 0 12 chr20 379233 379319 -71774563 + MIR SINE MIR 38 122 -86 2055 106 17 0 chr20 379756 380048 -71773834 - AluSx SINE Alu -15 297 1 623 82 41 20 chr20 380265 380363 -71773519 + HY3 scRNA scRNA 1 100 -1 2076 99 0 10 chr20 380865 381177 -71772705 + AluSx SINE Alu 1 309 0 423 189 0 14 chr20 381337 381411 -71772471 - AluJb SINE Alu -28 284 212 2042 112 0 7 chr20 381629 381933 -71771949 + AluSg SINE Alu 1 302 -8 1465 176 49 4 chr20 381949 382216 -71771666 + AluJo SINE Alu 1 279 -33 2174 89 13 22 chr20 382470 382786 -71771096 + AluSp SINE Alu 1 313 0 2211 75 0 26 chr20 382793 383101 -71770781 + AluSp SINE Alu 1 300 -13 829 88 7 73 chr20 383117 383143 -71770739 + AluSq/x SINE Alu 10 36 -277 2224 94 3 19 chr20 383143 383451 -71770431 - AluSg SINE Alu -7 303 1 829 88 7 73 chr20 383451 383560 -71770322 + AluSq/x SINE Alu 36 136 -177 2145 78 20 10 chr20 383560 383854 -71770028 + AluY SINE Alu 1 297 -14 1767 133 14 14 chr20 384252 384573 -71769309 - AluSx SINE Alu 0 321 1 538 213 0 71 chr20 384777 384918 -71768964 - MER94 DNA DNA 0 134 4 2030 122 0 0 chr20 384954 385249 -71768633 + AluSx SINE Alu 18 312 0 2324 90 3 0 chr20 385252 385562 -71768320 + AluSq SINE Alu 1 311 -2 1118 182 146 16 chr20 385608 385861 -71768021 + AluSx SINE Alu 12 297 -15 198 103 0 0 chr20 385939 385968 -71767914 + (TTCA)n Simple_repeat Simple_repeat 4 32 0 324 310 138 85 chr20 385983 386159 -71767723 - L2 LINE L2 -1 3271 3106 2190 101 0 7 chr20 386159 386467 -71767415 - AluSq SINE Alu -7 306 1 324 310 138 85 chr20 386467 386526 -71767356 - L2 LINE L2 -166 3106 3052 2353 88 3 0 chr20 386526 386834 -71767048 - AluSp SINE Alu -4 309 1 1442 165 91 11 chr20 386835 387120 -71766762 - AluJo SINE Alu -4 308 1 324 310 138 85 chr20 387120 387281 -71766601 - L2 LINE L2 -219 3053 2851 1762 137 23 23 chr20 387913 388212 -71765670 - AluJb SINE Alu -13 299 1 225 0 0 0 chr20 389238 389263 -71764619 + (TTTA)n Simple_repeat Simple_repeat 4 28 0 445 209 9 45 chr20 389263 389366 -71764516 - MER31A LTR ERV1 -32 453 353 848 162 0 7 chr20 389903 390051 -71763831 + FRAM SINE Alu 20 166 -10 24 0 0 0 chr20 390655 390679 -71763203 + AT_rich Low_complexity Low_complexity 1 24 0 1564 153 18 7 chr20 390979 391260 -71762622 - AluJo SINE Alu -28 284 1 739 206 144 0 chr20 391303 391483 -71762399 + L1MB7 LINE L1 5955 6160 -24 206 271 7 46 chr20 391807 391958 -71761924 + C-rich Low_complexity Low_complexity 3 147 0 21 0 0 0 chr20 392004 392025 -71761857 + GC_rich Low_complexity Low_complexity 1 21 0 27 62 0 0 chr20 392123 392171 -71761711 + GC_rich Low_complexity Low_complexity 1 48 0 260 252 164 101 chr20 392279 392438 -71761444 + MIR SINE MIR 83 251 -11 339 239 65 0 chr20 392542 392634 -71761248 + MER91C DNA MER1_type 7 104 -36 184 309 104 70 chr20 392663 392893 -71760989 + L2 LINE L2 718 955 -2359 616 53 0 0 chr20 392895 392971 -71760911 - Alu SINE Alu -233 77 2 1455 151 88 18 chr20 393301 393573 -71760309 - AluJo SINE Alu -16 296 6 2051 121 0 0 chr20 393701 393998 -71759884 + AluSx SINE Alu 14 310 -2 364 248 83 0 chr20 394234 394343 -71759539 - L1MCc LINE L1 -4365 2757 2640 * 870 218 33 37 chr20 394340 394613 -71759269 - L1ME1 LINE L1 -165 6001 5764 1373 198 72 0 chr20 394707 394985 -71758897 + MER58B DNA MER1_type 21 318 -23 2159 66 17 10 chr20 395022 395310 -71758572 - AluSp SINE Alu -23 290 1 2157 115 0 0 chr20 395336 395641 -71758241 + AluSx SINE Alu 1 305 -7 562 163 24 41 chr20 395657 395780 -71758102 - FLAM_C SINE Alu -22 121 1 1486 243 156 28 chr20 395808 396222 -71757660 - L1MCc LINE L1 -4493 2448 2088 372 94 0 0 chr20 396222 396275 -71757607 + (TA)n Simple_repeat Simple_repeat 2 54 0 1486 243 156 28 chr20 396275 396619 -71757263 - L1MCc LINE L1 -4853 2088 1789 2362 60 13 0 chr20 396619 396918 -71756964 - AluY SINE Alu -8 303 1 1486 243 156 28 chr20 396918 397272 -71756610 - L1MCc LINE L1 -5152 1789 1188 1056 169 6 6 chr20 397277 397460 -71756422 + AluJo SINE Alu 1 183 -129 2206 177 100 15 chr20 397460 397929 -71755953 - LTR22 LTR ERVK 0 509 1 22635 84 21 2 chr20 397929 401045 -71752837 - HERVK22 LTR ERVK 0 6837 2332 1415 119 25 0 chr20 401043 401245 -71752637 - HERVK22 LTR ERVK -5932 905 699 * 5262 100 42 32 chr20 401233 402033 -71751849 - HERVK22 LTR ERVK -6029 808 1 2166 184 98 11 chr20 402033 402501 -71751381 - LTR22 LTR ERVK 0 509 1 862 121 0 0 chr20 402502 402626 -71751256 + AluJo SINE Alu 179 302 -10 830 246 99 55 chr20 402626 402988 -71750894 - L1MCc LINE L1 -5230 1193 816 370 266 46 87 chr20 403614 403653 -71750229 - L2 LINE L2 -562 2752 2713 1182 186 90 29 chr20 403653 403932 -71749950 - AluJo SINE Alu -4 298 3 370 266 46 87 chr20 403932 404133 -71749749 - L2 LINE L2 -601 2713 2522 725 232 78 53 chr20 404210 404529 -71749353 - HAL1 LINE L1 -168 2339 2013 2045 123 0 7 chr20 404775 405076 -71748806 + AluSx SINE Alu 1 299 -13 251 275 66 32 chr20 405219 405391 -71748491 + MLT1H LTR MaLR 50 201 -208 1933 138 3 3 chr20 405858 406156 -71747726 - AluSx SINE Alu -13 299 2 1782 172 7 0 chr20 406166 406469 -71747413 - AluJb SINE Alu -7 305 1 1885 128 7 0 chr20 406499 406787 -71747095 - AluJo SINE Alu -22 290 1 1100 183 26 30 chr20 406807 407037 -71746845 - AluJb SINE Alu -26 286 58 1324 55 31 0 chr20 407308 407471 -71746411 + AluSp SINE Alu 1 168 -145 253 0 54 0 chr20 407482 407519 -71746363 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 228 211 171 0 chr20 407693 407769 -71746113 + L2 LINE L2 3175 3263 -9 1735 156 30 20 chr20 408245 408546 -71745336 + AluJb SINE Alu 1 304 -8 344 217 96 70 chr20 408728 408843 -71745039 - MER91B DNA MER1_type -61 129 12 197 219 276 9 chr20 408855 408960 -71744922 - MIR SINE MIR -6 256 124 1060 192 103 5 chr20 409380 409594 -71744288 + MER46A DNA MER2_type 1 235 -1 306 67 0 0 chr20 409833 409878 -71744004 + (TG)n Simple_repeat Simple_repeat 2 46 0 27 29 0 0 chr20 410709 410743 -71743139 + AT_rich Low_complexity Low_complexity 1 34 0 270 116 0 0 chr20 413063 413106 -71740776 + (TTCC)n Simple_repeat Simple_repeat 1 43 0 308 246 76 94 chr20 413799 413970 -71739912 - MIR SINE MIR -56 206 39 797 144 106 0 chr20 413994 414126 -71739756 + MER3 DNA MER1_type 63 208 -1 279 0 0 0 chr20 414293 414324 -71739558 + (TG)n Simple_repeat Simple_repeat 2 32 0 2336 103 3 0 chr20 414383 414694 -71739188 + AluSx SINE Alu 1 312 0 252 0 0 0 chr20 414708 414736 -71739146 + (TA)n Simple_repeat Simple_repeat 2 29 0 2067 107 14 3 chr20 414792 415081 -71738801 - AluSx SINE Alu -20 292 1 583 258 125 33 chr20 415081 415321 -71738561 - L1MC4a LINE L1 -1915 5893 5632 234 249 186 27 chr20 416852 416975 -71736907 - MIR SINE MIR -77 131 45 1210 174 144 8 chr20 417639 417903 -71735979 - AluJo SINE Alu -12 300 1 317 337 53 80 chr20 418579 418843 -71735039 + L2 LINE L2 2981 3237 -35 36 0 0 0 chr20 419535 419571 -71734311 + AT_rich Low_complexity Low_complexity 1 36 0 2196 110 10 7 chr20 419616 419925 -71733957 - AluSg SINE Alu 0 310 1 258 125 0 0 chr20 419927 419975 -71733907 + (T)n Simple_repeat Simple_repeat 1 48 0 2066 117 20 7 chr20 420003 420302 -71733580 - AluSg1 SINE Alu -6 303 1 925 132 112 20 chr20 420303 420455 -71733427 - FRAM SINE Alu -14 162 1 319 297 108 51 chr20 420553 420748 -71733134 - L1ME LINE L1 -317 5804 5599 1880 155 3 17 chr20 420987 421284 -71732598 + AluJo SINE Alu 5 297 -15 1933 75 8 11 chr20 421284 421549 -71732333 + AluY SINE Alu 44 308 -3 223 319 77 47 chr20 421985 422154 -71731728 + L2 LINE L2 2648 2821 -493 360 310 47 31 chr20 422372 422501 -71731381 + L2 LINE L2 3182 3312 -1 949 248 89 23 chr20 422679 422982 -71730900 + L2 LINE L2 2348 2670 -644 46 45 0 0 chr20 422987 423054 -71730828 + AT_rich Low_complexity Low_complexity 1 67 0 3181 182 128 57 chr20 423092 423623 -71730259 - L1MD2 LINE L1 -32 6327 5716 2320 81 17 7 chr20 423623 423921 -71729961 - AluSg SINE Alu -9 301 1 3181 182 128 57 chr20 423921 424212 -71729670 - L1MD2 LINE L1 -643 5716 5447 825 300 149 16 chr20 424215 424754 -71729128 + L2 LINE L2 2697 3313 0 221 269 43 85 chr20 424937 425078 -71728804 - MIR SINE MIR -72 190 56 239 316 13 0 chr20 425184 425260 -71728622 - L2 LINE L2 -3 3269 3193 1261 193 52 0 chr20 425800 426013 -71727869 + MER58A DNA MER1_type 1 224 0 1445 163 58 34 chr20 426750 427045 -71726837 - AluJo SINE Alu -8 304 3 784 116 0 27 chr20 427060 427172 -71726710 - FLAM_C SINE Alu -18 125 17 1225 112 0 6 chr20 427934 428103 -71725779 - FRAM SINE Alu -8 168 1 24 0 0 0 chr20 429557 429581 -71724301 + AT_rich Low_complexity Low_complexity 1 24 0 237 306 65 28 chr20 429630 429738 -71724144 + L2 LINE L2 3156 3267 -5 527 295 84 0 chr20 429998 430164 -71723718 + MIR SINE MIR 16 195 -67 2286 52 4 0 chr20 430233 430502 -71723380 - AluY SINE Alu -8 303 34 2355 93 0 0 chr20 430668 430959 -71722923 - AluSg SINE Alu -17 293 3 1175 159 142 21 chr20 430996 431285 -71722597 - MER33 DNA MER1_type 0 324 1 250 338 102 13 chr20 431378 431535 -71722347 - MER5A DNA MER1_type -2 187 17 868 204 0 6 chr20 432748 432910 -71720972 - FRAM SINE Alu -18 158 1 2208 211 39 66 chr20 433061 433494 -71720388 + MER119 DNA MER1_type 34 450 -133 2505 71 0 3 chr20 433494 433805 -71720077 + AluSx SINE Alu 1 310 -2 2208 211 39 66 chr20 433805 433935 -71719947 + MER119 DNA MER1_type 450 582 -1 856 267 44 4 chr20 434063 434288 -71719594 + Charlie8 DNA MER1_type 45 278 -2139 327 275 55 9 chr20 434453 434562 -71719320 + MIR SINE MIR 32 145 -63 2476 61 0 10 chr20 434950 435260 -71718622 - AluY SINE Alu -4 307 1 22 0 0 0 chr20 435265 435287 -71718595 + AT_rich Low_complexity Low_complexity 1 22 0 2628 36 0 7 chr20 435468 435774 -71718108 - AluY SINE Alu -7 304 1 957 144 0 0 chr20 436708 436854 -71717028 + AluSg/x SINE Alu 129 274 -36 1021 130 204 133 chr20 437470 437793 -71716089 - MER7A DNA MER2_type -2 344 1 1835 174 0 3 chr20 439188 439475 -71714407 - AluJb SINE Alu -26 286 1 368 222 139 141 chr20 439475 439769 -71714113 + L1MC4 LINE L1 7478 7771 -271 2444 69 3 10 chr20 439769 440073 -71713809 - AluSp SINE Alu -11 302 1 368 222 139 141 chr20 440073 440299 -71713583 + L1MC4 LINE L1 7771 7999 -43 1734 165 9 37 chr20 440299 440620 -71713262 - AluJb SINE Alu 0 312 1 3719 154 29 50 chr20 440631 440672 -71713210 - L1MB3 LINE L1 0 6183 6143 1651 157 61 7 chr20 440672 440952 -71712930 + AluJb SINE Alu 1 295 -17 3719 154 29 50 chr20 440952 441302 -71712580 - L1MB3 LINE L1 -40 6143 5811 252 0 0 0 chr20 441302 441330 -71712552 + (CA)n Simple_repeat Simple_repeat 2 29 0 3719 154 29 50 chr20 441330 441659 -71712223 - L1MB3 LINE L1 -372 5811 5477 628 88 22 11 chr20 441664 441755 -71712127 - FLAM_C SINE Alu -19 124 33 1070 157 12 23 chr20 441776 442016 -71711866 - L1P3 LINE L1 -632 5522 5280 1632 173 48 0 chr20 443673 443974 -71709908 + AluJb SINE Alu 1 314 0 1790 151 0 31 chr20 444049 444340 -71709542 - AluJb SINE Alu -30 282 1 198 311 49 0 chr20 444504 444565 -71709317 - L2 LINE L2 -25 3288 3225 486 269 253 23 chr20 444580 445015 -71708867 - L2 LINE L2 -516 2798 2264 347 304 119 6 chr20 445008 445176 -71708706 - MIR SINE MIR -48 214 28 * 227 369 39 39 chr20 445255 445385 -71708497 + L2 LINE L2 3143 3272 0 262 208 0 0 chr20 446937 446985 -71706897 - L2 LINE L2 -6 3266 3219 224 91 0 0 chr20 447149 447182 -71706700 - L2 LINE L2 -2 3311 3279 840 186 0 0 chr20 447599 447728 -71706154 - FRAM SINE Alu -47 129 1 233 290 110 10 chr20 448030 448130 -71705752 + L1ME1 LINE L1 647 756 -5449 2418 75 0 28 chr20 448134 448453 -71705429 - AluY SINE Alu -1 310 1 2167 128 0 7 chr20 448532 448836 -71705046 - AluSx SINE Alu -10 302 1 521 284 118 34 chr20 448868 449031 -71704851 + L1ME1 LINE L1 1268 1416 -4980 773 214 0 0 chr20 449031 449162 -71704720 + FLAM_A SINE Alu 1 131 -2 521 284 118 34 chr20 449162 449347 -71704535 + L1ME1 LINE L1 1416 1645 -4751 328 330 69 35 chr20 449473 449734 -71704148 + L1ME1 LINE L1 1918 2187 -4209 255 220 11 55 chr20 449761 449852 -71704030 + L1ME1 LINE L1 2201 2287 -3930 * 2136 195 73 91 chr20 449843 450108 -71703774 + L1ME1 LINE L1 4725 4993 -1242 1843 157 0 0 chr20 450108 450382 -71703500 - AluSx SINE Alu -22 290 17 2136 195 73 91 chr20 450382 451353 -71702529 + L1ME1 LINE L1 4993 5923 -312 816 204 0 0 chr20 451354 451486 -71702396 - FLAM_C SINE Alu -10 133 2 374 86 200 0 chr20 451486 451556 -71702326 + L1ME1 LINE L1 5840 5923 -243 1231 130 31 16 chr20 451556 451748 -71702134 + MER1B DNA MER1_type 1 195 -102 2698 157 87 29 chr20 451866 452290 -71701592 + L1MD3 LINE L1 7401 7866 -129 1378 165 105 35 chr20 452290 452575 -71701307 - AluJo SINE Alu -7 305 1 2698 157 87 29 chr20 452575 452703 -71701179 + L1MD3 LINE L1 7866 7985 -10 2087 191 19 24 chr20 452746 453208 -71700674 + L1ME1 LINE L1 5494 5953 -213 1581 65 0 0 chr20 453208 453393 -71700489 + AluY SINE Alu 1 185 -126 704 58 0 0 chr20 453393 453480 -71700402 + AluY SINE Alu 218 304 -7 573 272 97 19 chr20 453480 453686 -71700196 + L1ME1 LINE L1 5945 6166 0 1929 130 20 13 chr20 453740 454039 -71699843 + AluSx SINE Alu 1 301 -11 1416 105 85 74 chr20 454071 454329 -71699553 + AluSx SINE Alu 44 304 -8 458 125 38 12 chr20 454356 454436 -71699446 + L1MA6 LINE L1 6215 6296 -4 1293 207 79 8 chr20 454441 454707 -71699175 + AluJo SINE Alu 2 286 -16 23 0 0 0 chr20 454717 454740 -71699142 + AT_rich Low_complexity Low_complexity 1 23 0 291 136 102 0 chr20 454763 454822 -71699060 + L1M4 LINE L1 2945 3009 -3137 911 144 23 0 chr20 454828 454960 -71698922 + AluJo SINE Alu 1 135 -177 2622 52 3 0 chr20 454969 455277 -71698605 + AluY SINE Alu 1 309 -2 1520 151 3 102 chr20 455289 455614 -71698268 + AluJo SINE Alu 1 293 -19 793 168 15 29 chr20 455790 455927 -71697955 + AluJo SINE Alu 2 136 -176 1527 131 75 75 chr20 455927 456209 -71697673 + AluJo SINE Alu 1 282 -30 1996 103 28 14 chr20 456272 456554 -71697328 + AluSg SINE Alu 1 286 -24 618 79 0 0 chr20 456554 456643 -71697239 + (GA)n Simple_repeat Simple_repeat 2 90 0 357 254 44 33 chr20 456708 456889 -71696993 + L1M4 LINE L1 3275 3457 -2689 766 149 0 0 chr20 457329 457436 -71696446 - AluSq/x SINE Alu -205 108 2 1213 164 66 145 chr20 458042 458360 -71695522 - AluJo SINE Alu -9 293 1 4263 154 23 16 chr20 458555 458633 -71695249 + MER44D DNA MER2_type 33 109 -2378 1399 175 65 14 chr20 458633 458924 -71694958 - AluJo SINE Alu -6 306 1 4263 154 23 16 chr20 458924 459540 -71694342 + MER44D DNA MER2_type 109 604 -1 2153 174 61 30 chr20 459583 460055 -71693827 - L1MB7 LINE L1 -19 6165 5679 1913 147 3 19 chr20 460058 460372 -71693510 - AluJo SINE Alu -3 309 1 1970 128 7 3 chr20 460401 460699 -71693183 + AluSq SINE Alu 1 299 -14 2005 78 7 55 chr20 461768 462075 -71691807 - AluSc SINE Alu -17 292 1 1072 130 0 0 chr20 463055 463209 -71690673 + AluSg/x SINE Alu 137 290 -22 197 296 99 12 chr20 463727 463808 -71690074 - MIR SINE MIR -114 148 61 1978 116 6 25 chr20 464345 464663 -71689219 + AluSx SINE Alu 1 312 0 819 151 0 0 chr20 464678 464797 -71689085 + FLAM_C SINE Alu 7 125 -18 2021 95 56 0 chr20 465072 465357 -71688525 + AluSx SINE Alu 1 301 -11 438 128 163 0 chr20 466027 466113 -71687769 - MIR SINE MIR -75 187 88 213 297 27 14 chr20 466109 466183 -71687699 - MIR SINE MIR -102 160 86 * 198 182 73 73 chr20 466428 466483 -71687399 + L2 LINE L2 3216 3270 -2 1827 106 67 14 chr20 467562 467845 -71686037 - AluSx SINE Alu -14 298 1 2336 188 155 11 chr20 468730 469277 -71684605 - MLT1E2 LTR MaLR 0 626 1 918 275 85 87 chr20 469277 469888 -71683994 - MLT1E2-int LTR MaLR 0 1371 762 1087 220 13 4 chr20 469904 470136 -71683746 - MLT1E2-int LTR MaLR -889 482 249 727 106 19 0 chr20 470142 470246 -71683636 - AluJb SINE Alu -19 293 188 370 172 253 0 chr20 470249 470348 -71683534 - MLT1E2-int LTR MaLR -1247 124 1 2959 183 37 41 chr20 470348 470977 -71682905 - MLT1E2 LTR MaLR 0 626 1 689 244 146 28 chr20 471766 471979 -71681903 - MIR SINE MIR -23 239 2 2281 58 7 0 chr20 472033 472328 -71681554 - AluSg SINE Alu -13 297 1 270 329 67 48 chr20 474013 474329 -71679553 + L2 LINE L2 2636 2957 -357 300 258 16 0 chr20 474944 475006 -71678876 + MIR3 SINE MIR 114 176 -32 525 308 263 23 chr20 475099 475539 -71678343 - L2 LINE L2 -3 3310 2752 487 316 35 0 chr20 475904 476075 -71677807 - MIR SINE MIR -40 222 46 180 0 0 0 chr20 476086 476106 -71677776 + (TC)n Simple_repeat Simple_repeat 2 21 0 1610 165 4 11 chr20 476106 476273 -71677609 - AluJo SINE Alu -27 285 119 204 40 0 0 chr20 476273 476298 -71677584 + (TTA)n Simple_repeat Simple_repeat 2 26 0 1610 165 4 11 chr20 476298 476397 -71677485 - AluJo SINE Alu -193 119 21 1346 277 62 57 chr20 476428 476974 -71676908 - MLT1E2 LTR MaLR 0 549 1 268 264 14 0 chr20 476991 477063 -71676819 + L1ME LINE L1 5759 5831 -290 869 183 29 11 chr20 477063 477238 -71676644 - MIR SINE MIR -22 240 63 2108 100 14 0 chr20 477382 477673 -71676209 - AluSq SINE Alu -18 295 1 2296 74 3 0 chr20 477735 478031 -71675851 + AluY SINE Alu 1 297 -14 1698 162 0 10 chr20 478176 478466 -71675416 - AluJb SINE Alu -5 307 21 200 213 0 0 chr20 478578 478625 -71675257 + T-rich Low_complexity Low_complexity 1 47 0 391 246 10 13 chr20 478853 478958 -71674924 + MIR SINE MIR 48 147 -61 2103 126 3 3 chr20 478962 479337 -71674545 + AluSx SINE Alu 1 375 0 410 245 27 54 chr20 479382 479529 -71674353 + MLT1H LTR MaLR 68 210 -339 22 0 0 0 chr20 479685 479707 -71674175 + AT_rich Low_complexity Low_complexity 1 22 0 296 288 32 48 chr20 479993 480118 -71673764 + MIR SINE MIR 140 262 0 711 300 146 6 chr20 480120 480463 -71673419 - L2 LINE L2 -62 3251 2861 3036 231 82 58 chr20 480571 481179 -71672703 - L2 LINE L2 -468 2846 2255 1645 178 48 66 chr20 481179 481572 -71672310 + MLT1B LTR MaLR 4 389 -1 3036 231 82 58 chr20 481572 481611 -71672271 - L2 LINE L2 -1059 2255 2218 2131 105 7 0 chr20 481611 481905 -71671977 + AluSq SINE Alu 1 296 -17 3036 231 82 58 chr20 481905 482262 -71671620 - L2 LINE L2 -1096 2218 1816 267 103 0 0 chr20 482277 482316 -71671566 + (GGAA)n Simple_repeat Simple_repeat 4 42 0 2301 93 0 0 chr20 482319 482620 -71671262 - AluSx SINE Alu -11 301 1 2673 208 122 41 chr20 482621 482650 -71671232 + L1MC4 LINE L1 7100 7125 -917 2193 105 0 3 chr20 482650 482954 -71670928 + AluSq SINE Alu 1 303 -10 2673 208 122 41 chr20 482954 483315 -71670567 + L1MC4 LINE L1 7125 7456 -586 2242 96 0 0 chr20 483315 483607 -71670275 + AluSg SINE Alu 1 292 -18 2673 208 122 41 chr20 483607 484020 -71669862 + L1MC4 LINE L1 7456 7982 -60 1731 172 3 0 chr20 484020 484310 -71669572 - AluJo SINE Alu -19 293 3 2673 208 122 41 chr20 484310 484375 -71669507 + L1MC4 LINE L1 7982 8040 -2 2468 234 114 22 chr20 484382 485152 -71668730 - L2 LINE L2 -1480 1834 994 445 292 17 17 chr20 485148 485268 -71668614 - MIR SINE MIR -129 133 14 * 182 88 0 29 chr20 485393 485427 -71668455 + (TAAAA)n Simple_repeat Simple_repeat 3 35 0 417 275 116 91 chr20 485540 486047 -71667835 - L2 LINE L2 -9 3304 2743 1323 151 50 107 chr20 486047 486169 -71667713 + AluJb SINE Alu 1 128 -184 2097 74 3 61 chr20 486169 486481 -71667401 + AluY SINE Alu 1 294 -17 1323 151 50 107 chr20 486481 486675 -71667207 + AluJb SINE Alu 128 299 -13 417 275 116 91 chr20 486675 486910 -71666972 - L2 LINE L2 -570 2743 2515 218 280 87 0 chr20 487161 487234 -71666648 + MIR SINE MIR 85 149 -59 1816 168 3 0 chr20 487271 487575 -71666307 + AluJb SINE Alu 1 305 -7 367 305 62 8 chr20 487612 487740 -71666142 - MIR3 SINE MIR -71 137 3 270 283 264 13 chr20 487826 487985 -71665897 + MIR SINE MIR 7 205 -57 924 245 138 47 chr20 488075 488178 -71665704 - MER20B DNA MER1_type -2 781 689 2255 79 0 3 chr20 488178 488470 -71665412 - AluSc SINE Alu -18 291 1 924 245 138 47 chr20 488470 488757 -71665125 - MER20B DNA MER1_type -94 689 342 2202 146 22 0 chr20 488757 489113 -71664769 + MLT1A1 LTR MaLR 2 365 0 924 245 138 47 chr20 489113 489170 -71664712 - MER20B DNA MER1_type -441 342 292 1874 134 22 116 chr20 489173 489355 -71664527 + L1MC2 LINE L1 5928 6125 -219 2031 77 0 71 chr20 489355 489691 -71664191 + AluSx SINE Alu 1 312 0 1874 134 22 116 chr20 489691 489902 -71663980 + L1MC2 LINE L1 6125 6277 -67 1494 183 33 36 chr20 489902 490203 -71663679 - AluJo SINE Alu -12 300 1 1874 134 22 116 chr20 490203 490256 -71663626 + L1MC2 LINE L1 6277 6333 -11 508 211 0 0 chr20 490282 490386 -71663496 - MER20B DNA MER1_type -494 289 186 287 325 25 42 chr20 490643 490768 -71663114 + MIR SINE MIR 41 163 -56 1269 256 153 9 chr20 490801 491246 -71662636 - L2 LINE L2 0 3313 2805 183 67 0 67 chr20 491531 491561 -71662321 - MER5A DNA MER1_type -35 154 127 320 155 17 17 chr20 491561 491619 -71662263 - AluJ/FLAM SINE Alu -244 58 1 255 238 95 29 chr20 491697 491802 -71662080 - MIR SINE MIR -67 141 30 319 288 85 72 chr20 491826 491979 -71661903 - MIR SINE MIR -29 233 79 226 321 205 9 chr20 491986 492098 -71661784 + MIR SINE MIR 16 149 -113 198 329 14 14 chr20 492446 492519 -71661363 + MIR SINE MIR 111 183 -79 550 269 45 6 chr20 492849 493005 -71660877 - MIR SINE MIR -38 224 63 925 214 78 79 chr20 493612 494145 -71659737 - L2 LINE L2 -1 3312 2771 2034 105 3 7 chr20 494145 494459 -71659423 - AluSx SINE Alu 0 312 5 925 214 78 79 chr20 494459 494609 -71659273 - L2 LINE L2 -542 2771 2622 228 274 57 47 chr20 494669 494775 -71659107 - MIR SINE MIR -10 252 146 783 184 13 13 chr20 494806 494964 -71658918 - L1MB5 LINE L1 0 6174 6017 418 267 0 9 chr20 494964 495069 -71658813 - MIR SINE MIR -98 164 61 2013 128 10 3 chr20 495159 495463 -71658419 - AluSq SINE Alu -7 306 1 2095 108 6 10 chr20 495490 495804 -71658078 + AluSp SINE Alu 1 313 0 248 220 121 26 chr20 495937 496111 -71657771 + MIR SINE MIR 9 248 -14 2130 105 0 0 chr20 496279 496594 -71657288 - AluSx SINE Alu 0 312 1 260 287 20 53 chr20 496870 497001 -71656881 + MIR SINE MIR 39 166 -62 454 138 0 0 chr20 497722 497787 -71656095 - AluSq/x SINE Alu -194 119 55 373 217 54 0 chr20 498245 498337 -71655545 + MIR SINE MIR 80 176 -86 2206 119 0 0 chr20 499048 499359 -71654523 - AluSx SINE Alu -1 311 1 2194 96 10 0 chr20 499814 500115 -71653767 - AluSg SINE Alu -6 304 1 1961 127 0 7 chr20 500217 500536 -71653346 + AluSx SINE Alu 1 317 0 1520 200 95 77 chr20 500559 500652 -71653230 - Charlie4a DNA MER1_type -1456 505 415 744 172 0 22 chr20 500652 500786 -71653096 - FLAM_C SINE Alu 0 133 3 1520 200 95 77 chr20 500786 501188 -71652694 - Charlie4a DNA MER1_type -1546 415 1 263 307 137 13 chr20 501247 501400 -71652482 - MIR3 SINE MIR -36 172 1 184 286 0 29 chr20 501925 501995 -71651887 + MIR SINE MIR 80 147 -115 181 311 40 0 chr20 502230 502304 -71651578 - L2 LINE L2 -131 3182 3106 184 242 326 5 chr20 502364 502554 -71651328 - L2 LINE L2 -351 2963 2713 261 296 74 9 chr20 502599 502707 -71651175 + MIR SINE MIR 31 145 -63 574 233 123 110 chr20 503435 503882 -71650000 + L2 LINE L2 2819 3271 -1 401 218 89 10 chr20 503889 503990 -71649892 - MIR SINE MIR -77 185 77 290 197 30 0 chr20 504474 504540 -71649342 + L3 LINE CR1 1405 1472 -105 232 174 22 0 chr20 504657 504703 -71649179 - Charlie8 DNA MER1_type -1003 1414 1368 783 245 180 11 chr20 505035 505313 -71648569 + LTR16C LTR ERVL 167 491 0 367 221 74 32 chr20 505931 506026 -71647856 - L2 LINE L2 -6 3266 3168 243 309 64 21 chr20 506098 506192 -71647690 - L2 LINE L2 -248 3065 2968 1724 170 3 19 chr20 506228 506545 -71647337 - AluJb SINE Alu 0 312 1 1244 238 31 48 chr20 506813 507221 -71646661 + MLT1J LTR MaLR 1 437 -74 2078 111 3 10 chr20 507280 507586 -71646296 + AluSx SINE Alu 9 312 0 474 340 0 13 chr20 507994 508153 -71645729 + MIR3 SINE MIR 45 201 -7 315 71 0 0 chr20 508244 508286 -71645596 + (CA)n Simple_repeat Simple_repeat 1 42 0 7301 31 0 0 chr20 508411 509713 -71644169 - L1PA5 LINE L1 -3 6151 4848 580 311 36 0 chr20 509716 509912 -71643970 + MIR SINE MIR 57 259 -3 344 335 55 0 chr20 510140 510304 -71643578 + MIR SINE MIR 90 262 0 954 80 7 0 chr20 510346 510484 -71643398 + L1MA2 LINE L1 6166 6304 0 242 274 59 13 chr20 510614 510767 -71643115 + (TTCA)n Simple_repeat Simple_repeat 4 163 0 * 439 220 27 65 chr20 510735 510921 -71642961 + (TCCA)n Simple_repeat Simple_repeat 1 179 0 312 293 35 23 chr20 510868 511042 -71642840 + (TTCA)n Simple_repeat Simple_repeat 4 179 0 * 262 344 53 64 chr20 511304 511586 -71642296 - L2 LINE L2 0 3272 2994 2226 87 0 78 chr20 511594 511927 -71641955 - AluSx SINE Alu -5 307 1 234 279 58 19 chr20 511944 512048 -71641834 - MIR SINE MIR -67 141 34 1576 152 93 24 chr20 512305 512595 -71641287 + AluJo SINE Alu 1 310 -2 2058 146 7 0 chr20 512657 512952 -71640930 + AluSx SINE Alu 6 302 -10 483 291 0 33 chr20 512978 513129 -71640753 - MIR SINE MIR -14 248 103 2208 98 3 29 chr20 513487 513794 -71640088 - AluSx SINE Alu -11 301 3 1004 182 0 0 chr20 513855 514020 -71639862 + FRAM SINE Alu 1 165 -11 856 266 47 7 chr20 514026 514363 -71639519 - MLT1J LTR MaLR -135 376 6 224 284 68 34 chr20 514427 514515 -71639367 + L2 LINE L2 3133 3223 -49 267 219 24 37 chr20 514940 515022 -71638860 + CT-rich Low_complexity Low_complexity 4 84 0 248 270 11 0 chr20 515036 515125 -71638757 + L1MC4 LINE L1 6614 6703 -1339 313 203 17 0 chr20 515271 515330 -71638552 + L1MC4 LINE L1 6644 6703 -1339 210 143 0 0 chr20 515330 515365 -71638517 + (TG)n Simple_repeat Simple_repeat 1 35 0 464 317 10 63 chr20 515365 515570 -71638312 - L2 LINE L2 -18 3295 3102 2361 102 3 0 chr20 515639 515943 -71637939 - AluSg SINE Alu -5 305 1 1153 218 17 59 chr20 515947 516181 -71637701 - LTR37A LTR ERV1 -8 418 207 1798 140 13 39 chr20 516181 516488 -71637394 - AluJb SINE Alu -13 299 1 1153 218 17 59 chr20 516488 516657 -71637225 - LTR37A LTR ERV1 -219 207 32 243 312 26 0 chr20 516727 516804 -71637078 - L2 LINE L2 -31 3241 3163 5411 137 30 16 chr20 516884 517882 -71636000 - Tigger3b DNA MER2_type 0 1231 220 1518 94 5 0 chr20 517882 518074 -71635808 - AluSp SINE Alu -12 301 109 1664 169 55 48 chr20 518081 518501 -71635381 - MER113 DNA MER1_type? -74 447 25 266 214 14 0 chr20 518541 518611 -71635271 - MIR3 SINE MIR -54 154 84 1356 276 45 17 chr20 519013 519433 -71634449 + MLT1K LTR MaLR 61 492 -96 1268 204 6 100 chr20 519468 519481 -71634401 - AluSp SINE Alu -6 307 294 216 0 0 0 chr20 519481 519505 -71634377 + (TTAAA)n Simple_repeat Simple_repeat 4 27 0 1268 204 6 100 chr20 519505 519830 -71634052 - AluSp SINE Alu -19 294 1 284 98 98 0 chr20 519832 519883 -71633999 - FLAM_A SINE Alu -4 129 74 258 32 0 0 chr20 519900 519931 -71633951 + (CA)n Simple_repeat Simple_repeat 2 32 0 302 145 0 16 chr20 519933 519995 -71633887 + MLT1K LTR MaLR 525 585 -3 546 274 30 38 chr20 520358 520595 -71633287 - L2 LINE L2 -1 3312 3078 443 121 50 177 chr20 520604 520745 -71633137 + L1MB4 LINE L1 6058 6180 0 724 256 75 10 chr20 520752 521108 -71632774 - L2 LINE L2 -228 3085 2704 2134 129 7 0 chr20 521243 521537 -71632345 - AluSx SINE Alu -14 298 3 211 264 0 94 chr20 522010 522116 -71631766 + L2 LINE L2 3218 3313 0 549 330 24 5 chr20 522181 522387 -71631495 - MIR SINE MIR 0 262 53 1721 158 7 52 chr20 522543 522853 -71631029 - AluJo SINE Alu -16 296 1 2397 103 0 0 chr20 522865 523166 -71630716 - AluSx SINE Alu -11 301 1 446 281 39 59 chr20 523310 523513 -71630369 + L1MC4a LINE L1 5691 5889 -1919 1664 156 11 35 chr20 523515 523798 -71630084 - AluJb SINE Alu -36 276 1 321 281 39 55 chr20 523799 523927 -71629955 + L1MC4a LINE L1 5856 5981 -1827 426 221 0 10 chr20 523965 524069 -71629813 + MIR SINE MIR 158 260 -2 1349 57 0 0 chr20 524081 524239 -71629643 + AluY SINE Alu 146 303 -8 2317 108 0 6 chr20 524344 524658 -71629224 - AluSx SINE Alu 0 312 1 2059 152 10 0 chr20 524690 524999 -71628883 + AluJb SINE Alu 1 312 0 180 0 0 0 chr20 525242 525262 -71628620 + (TTA)n Simple_repeat Simple_repeat 2 21 0 2286 116 7 0 chr20 525855 526165 -71627717 + AluSx SINE Alu 1 312 0 249 294 151 0 chr20 526239 526365 -71627517 + MIR SINE MIR 48 192 -70 292 275 90 3 chr20 526464 526653 -71627229 + MIR SINE MIR 2 262 0 308 270 73 36 chr20 526928 527065 -71626817 + L2 LINE L2 3162 3303 -10 488 246 183 6 chr20 527176 527351 -71626531 + MIR SINE MIR 32 237 -25 621 213 54 81 chr20 527400 527579 -71626303 + MIR SINE MIR 12 183 -79 2083 137 0 0 chr20 527579 527872 -71626010 - AluSx SINE Alu -18 294 2 621 213 54 81 chr20 527872 527950 -71625932 + MIR SINE MIR 183 262 0 239 277 50 10 chr20 528048 528149 -71625733 - MIR SINE MIR -76 132 28 902 232 31 105 chr20 528558 528768 -71625114 - L1MC4 LINE L1 0 8042 7881 1914 68 124 11 chr20 528768 529034 -71624848 - AluSg1 SINE Alu -13 296 1 902 232 31 105 chr20 529034 529272 -71624610 - L1MC4 LINE L1 -161 7881 7627 1915 142 28 3 chr20 529464 529753 -71624129 + AluJb SINE Alu 1 296 -16 198 308 33 0 chr20 529876 529967 -71623915 + MIR SINE MIR 34 127 -81 222 289 70 26 chr20 530027 530141 -71623741 + MIR SINE MIR 26 144 -64 364 318 128 5 chr20 530479 530690 -71623192 + L1MC4a LINE L1 5740 5976 -1832 686 200 13 26 chr20 530843 530998 -71622884 + L1ME3A LINE L1 6016 6168 -2 2436 88 3 0 chr20 531001 531297 -71622585 + AluSx SINE Alu 1 297 -15 1849 152 13 23 chr20 531365 531668 -71622214 + AluJo SINE Alu 1 300 -12 196 322 34 8 chr20 532013 532131 -71621751 - MIR3 SINE MIR -86 122 2 195 214 36 18 chr20 532439 532495 -71621387 + MIR SINE MIR 97 153 -55 182 363 99 0 chr20 532473 532564 -71621318 + L2 LINE L2 3163 3262 -10 * 553 91 0 0 chr20 532688 532765 -71621117 + FLAM_A SINE Alu 58 134 -8 313 283 78 6 chr20 533255 533421 -71620461 + L1MC4a LINE L1 5748 5925 -1883 192 135 0 0 chr20 533900 533937 -71619945 + (CA)n Simple_repeat Simple_repeat 1 37 0 335 317 43 6 chr20 534312 534476 -71619406 + L1MC4a LINE L1 5724 5893 -1915 1306 98 0 0 chr20 534602 534766 -71619116 - AluSc SINE Alu -24 285 122 220 265 84 12 chr20 535437 535520 -71618362 - MIR SINE MIR -100 108 20 274 222 0 42 chr20 536001 536073 -71617809 + MIR SINE MIR 104 172 -90 2417 83 0 7 chr20 536132 536434 -71617448 + AluSx SINE Alu 1 300 -12 574 279 131 18 chr20 536494 536723 -71617159 + MIR SINE MIR 8 262 0 290 297 187 7 chr20 537367 537522 -71616360 + MIR SINE MIR 37 219 -43 284 264 138 18 chr20 538839 539006 -71614876 + MIR SINE MIR 73 259 -3 22 70 0 0 chr20 539350 539393 -71614489 + GC_rich Low_complexity Low_complexity 1 43 0 232 205 51 17 chr20 539606 539723 -71614159 + (CCG)n Simple_repeat Simple_repeat 1 121 0 28 71 0 0 chr20 539876 539932 -71613950 + GC_rich Low_complexity Low_complexity 1 56 0 23 54 0 0 chr20 539960 539997 -71613885 + GC_rich Low_complexity Low_complexity 1 37 0 209 170 0 21 chr20 540231 540278 -71613604 + MIR SINE MIR 94 139 -69 352 265 106 41 chr20 540332 540502 -71613380 - MER5A DNA MER1_type -2 187 7 519 266 40 0 chr20 540619 540743 -71613139 - L2 LINE L2 -1 3312 3184 350 242 121 0 chr20 541929 542053 -71611829 + MIR SINE MIR 108 246 -16 419 258 177 43 chr20 542198 542497 -71611385 + L2 LINE L2 2834 3172 -141 * 453 200 0 0 chr20 542486 542566 -71611316 - L2 LINE L2 0 3313 3234 640 256 92 29 chr20 542620 542827 -71611055 - MIR SINE MIR -29 233 14 343 268 10 0 chr20 543625 543737 -71610145 - L1M3 LINE L1 -601 5579 5468 1921 79 12 0 chr20 543806 544047 -71609835 + AluSx SINE Alu 34 277 -35 225 0 0 0 chr20 544048 544073 -71609809 + (TC)n Simple_repeat Simple_repeat 2 26 0 * 777 98 0 0 chr20 544072 544184 -71609698 + (TA)n Simple_repeat Simple_repeat 1 112 0 193 267 0 0 chr20 544352 544397 -71609485 - MIR SINE MIR 0 262 218 1513 199 59 3 chr20 544498 544820 -71609062 + MLT1F LTR MaLR 1 340 -202 241 157 12 108 chr20 544882 544900 -71608982 + MLT1G LTR MaLR 468 486 -104 1927 152 0 23 chr20 544900 545203 -71608679 + AluJo SINE Alu 1 296 -16 241 157 12 108 chr20 545203 545267 -71608615 + MLT1G LTR MaLR 486 590 0 893 259 95 39 chr20 545273 545609 -71608273 - MLT1J LTR MaLR -143 368 14 1053 215 18 0 chr20 545659 545882 -71608000 + MIR SINE MIR 15 241 -21 2024 124 28 0 chr20 545920 546211 -71607671 - AluSq SINE Alu -14 299 1 214 293 17 0 chr20 546327 546385 -71607497 + L2 LINE L2 3255 3313 0 410 257 20 72 chr20 546620 546745 -71607137 - MER103 DNA DNA -10 156 39 1704 192 10 45 chr20 546745 547058 -71606824 - AluJb SINE Alu -10 302 1 410 257 20 72 chr20 547058 547084 -71606798 - MER103 DNA DNA -127 39 13 778 202 96 6 chr20 547420 547598 -71606284 - MIR SINE MIR -3 259 66 1212 234 135 11 chr20 547985 548353 -71605529 + MLT1G LTR MaLR 168 577 -13 3069 191 16 35 chr20 548431 548956 -71604926 + MER82 DNA MER2_type 1 513 -140 2357 93 0 0 chr20 548956 549246 -71604636 - AluSc SINE Alu -19 290 1 3069 191 16 35 chr20 549246 549385 -71604497 + MER82 DNA MER2_type 513 653 0 533 238 41 17 chr20 549570 549760 -71604122 - MIR SINE MIR -44 218 25 193 171 0 0 chr20 549817 549852 -71604030 + L2 LINE L2 3216 3250 -22 1927 161 3 3 chr20 600206 600505 -71553377 - AluJb SINE Alu -13 299 1 286 284 176 6 chr20 600539 600715 -71553167 - L1MC4 LINE L1 -8 8034 7829 280 274 77 30 chr20 600908 601076 -71552806 + MER113 DNA MER1_type? 283 458 -63 471 231 30 22 chr20 601728 601862 -71552020 - MLT1J LTR MaLR -363 148 14 1113 215 18 0 chr20 601912 602135 -71551747 + MIR SINE MIR 15 241 -21 2008 124 28 0 chr20 602173 602463 -71551419 - AluSq SINE Alu -15 298 1 216 318 16 0 chr20 602574 602637 -71551245 + L2 LINE L2 3250 3313 0 375 263 20 72 chr20 602872 602997 -71550885 - MER103 DNA DNA -10 156 39 1711 192 10 45 chr20 602997 603310 -71550572 - AluJb SINE Alu -10 302 1 375 263 20 72 chr20 603310 603336 -71550546 - MER103 DNA DNA -127 39 13 804 219 115 0 chr20 603672 603855 -71550027 - MIR SINE MIR -3 259 56 1157 234 135 11 chr20 604237 604605 -71549277 + MLT1G LTR MaLR 168 577 -13 3268 191 16 35 chr20 604683 605208 -71548674 + MER82 DNA MER2_type 1 513 -140 2344 93 0 0 chr20 605208 605498 -71548384 - AluSc SINE Alu -19 290 1 3268 191 16 35 chr20 605498 605637 -71548245 + MER82 DNA MER2_type 513 653 0 566 238 41 17 chr20 605822 606012 -71547870 - MIR SINE MIR -44 218 25 202 225 0 0 chr20 606064 606104 -71547778 + L2 LINE L2 3211 3250 -22 271 120 245 18 chr20 606748 606830 -71547052 + MIR3 SINE MIR 70 164 -44 365 320 54 0 chr20 606923 607070 -71546812 - MIR SINE MIR -106 156 2 348 330 172 21 chr20 607091 607324 -71546558 + L2 LINE L2 2948 3215 -57 1918 156 0 3 chr20 607415 607698 -71546184 + AluJb SINE Alu 11 292 -20 1363 213 295 2 chr20 607698 608111 -71545771 + MLT1G LTR MaLR 57 590 0 1071 223 116 57 chr20 608112 608801 -71545081 + L2 LINE L2 2570 3313 0 318 276 142 8 chr20 609405 609532 -71544350 + MIR SINE MIR 119 262 0 1873 168 6 22 chr20 609788 610103 -71543779 + AluJo SINE Alu 1 310 -2 625 285 7 0 chr20 610163 610314 -71543568 + MIR SINE MIR 45 196 -66 251 217 84 24 chr20 610322 610405 -71543477 - MIR SINE MIR -85 177 90 276 229 34 30 chr20 610758 610863 -71543019 + L1MC4a LINE L1 5514 5612 -598 * 432 256 30 67 chr20 610825 610989 -71542893 - L2 LINE L2 -9 3304 3147 1218 237 104 64 chr20 611162 611693 -71542189 + MLT1H1 LTR MaLR 4 555 0 241 240 0 0 chr20 611696 611746 -71542136 + L1MC4a LINE L1 5611 5660 -510 464 337 30 0 chr20 612129 612331 -71541551 + L1MC4a LINE L1 5714 5921 -1887 2213 112 0 0 chr20 612826 613122 -71540760 - AluSg SINE Alu -14 296 1 1285 244 71 92 chr20 613152 613726 -71540156 + MLT1F1 LTR MaLR 6 567 0 762 95 0 63 chr20 613859 613985 -71539897 - AluSp/q SINE Alu -4 309 192 358 318 36 41 chr20 614042 614237 -71539645 - L1ME3A LINE L1 -284 5886 5693 367 294 76 46 chr20 614378 614575 -71539307 + L2 LINE L2 3108 3310 -3 201 276 86 0 chr20 614587 614645 -71539237 + MIR3 SINE MIR 104 166 -42 662 259 71 13 chr20 614780 615004 -71538878 - MIR SINE MIR 0 262 26 1634 148 7 14 chr20 615222 615500 -71538382 - AluJo SINE Alu -36 276 1 847 257 21 22 chr20 615503 615752 -71538130 - MIR SINE MIR -13 249 3 222 171 49 0 chr20 615911 615952 -71537930 + polypurine Low_complexity Low_complexity 5 47 0 543 335 144 17 chr20 615993 616161 -71537721 + L2 LINE L2 2791 2936 -336 2218 110 0 7 chr20 616161 616471 -71537411 + AluSx SINE Alu 2 309 -3 543 335 144 17 chr20 616471 616713 -71537169 + L2 LINE L2 2936 3251 -21 187 274 20 0 chr20 616744 616795 -71537087 + L2 LINE L2 3221 3272 0 530 303 7 7 chr20 616979 617134 -71536748 + MIR SINE MIR 77 231 -31 2723 185 27 119 chr20 617182 617644 -71536238 - L1MC4 LINE L1 0 8042 7539 1918 123 32 0 chr20 617644 617928 -71535954 - AluSx SINE Alu -18 294 2 2723 185 27 119 chr20 617928 617985 -71535897 - L1MC4 LINE L1 -503 7539 7478 183 42 0 0 chr20 617985 618009 -71535873 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2157 89 3 3 chr20 618013 618295 -71535587 - AluSq SINE Alu -31 282 1 2723 185 27 119 chr20 618295 618717 -71535165 - L1MC4 LINE L1 -567 7475 7182 317 328 61 22 chr20 618775 619004 -71534878 - L1MC4a LINE L1 -1741 6067 5830 256 247 0 27 chr20 619058 619131 -71534751 - MIR3 SINE MIR -51 157 87 211 217 132 38 chr20 619655 619761 -71534121 + MIR SINE MIR 16 131 -77 581 205 214 3 chr20 620984 621156 -71532726 - MIR SINE MIR -32 230 25 434 245 31 44 chr20 621493 621652 -71532230 + MIR3 SINE MIR 20 176 -32 230 263 0 18 chr20 621642 621699 -71532183 + L2 LINE L2 3008 3063 -209 * 218 264 0 0 chr20 621769 621822 -71532060 - L2 LINE L2 -4 3268 3216 192 220 40 0 chr20 621858 621908 -71531974 + L2 LINE L2 3262 3313 0 859 219 36 101 chr20 621944 622332 -71531550 - MER113 DNA MER1_type? 0 521 159 855 198 6 6 chr20 622393 622565 -71531317 + L1ME1 LINE L1 5986 6157 -9 1689 146 47 7 chr20 622590 622864 -71531018 + AluSx SINE Alu 1 285 -27 405 54 0 0 chr20 622864 622920 -71530962 + (CCA)n Simple_repeat Simple_repeat 3 58 0 313 179 0 0 chr20 622929 622985 -71530897 - MER113 DNA MER1_type? -432 89 34 252 310 0 0 chr20 623013 623084 -71530798 + (TGAA)n Simple_repeat Simple_repeat 3 73 0 393 306 135 39 chr20 623093 623322 -71530560 - L3 LINE CR1 -74 1503 1253 523 297 160 20 chr20 623383 623689 -71530193 - L2 LINE L2 -92 3221 2873 1555 168 3 46 chr20 623891 624040 -71529842 + AluJo SINE Alu 1 132 -180 2203 100 7 7 chr20 624040 624340 -71529542 + AluSg SINE Alu 1 300 -10 1555 168 3 46 chr20 624340 624493 -71529389 + AluJo SINE Alu 132 290 -22 745 292 50 0 chr20 624523 624742 -71529140 + MIR SINE MIR 12 241 -21 2002 116 14 0 chr20 624956 625249 -71528633 - AluSx SINE Alu -15 297 1 2208 106 0 0 chr20 625435 625737 -71528145 - AluSg SINE Alu -8 302 1 870 235 53 62 chr20 625907 626453 -71527429 + L2 LINE L2 2710 3267 -46 334 154 31 0 chr20 626834 626899 -71526983 - MIR SINE MIR -92 170 104 598 188 56 42 chr20 626920 627064 -71526818 + MIR SINE MIR 117 262 0 292 241 24 12 chr20 627072 627155 -71526727 - MIR SINE MIR -149 113 30 1527 177 33 20 chr20 627167 627467 -71526415 + AluJo SINE Alu 5 308 -4 203 170 21 0 chr20 627480 627527 -71526355 + (CAA)n Simple_repeat Simple_repeat 3 50 0 247 293 15 21 chr20 627937 628272 -71525610 + (GGGTG)n Simple_repeat Simple_repeat 1 332 0 192 361 0 50 chr20 628611 628730 -71525152 + MIR SINE MIR 76 188 -74 180 125 0 0 chr20 629165 629197 -71524685 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 309 318 19 34 chr20 629389 629569 -71524313 + L1ME LINE L1 5483 5646 -524 749 251 138 10 chr20 629715 629830 -71524052 - L2 LINE L2 0 3313 3214 1768 157 7 20 chr20 629830 630135 -71523747 + AluJo SINE Alu 1 301 -11 749 251 138 10 chr20 630135 630310 -71523572 - L2 LINE L2 -99 3214 2986 31 44 0 0 chr20 630534 630579 -71523303 + AT_rich Low_complexity Low_complexity 1 45 0 1516 170 20 30 chr20 630596 630896 -71522986 + AluJo SINE Alu 1 297 -15 877 150 0 0 chr20 630939 631072 -71522810 + AluSq/x SINE Alu 1 133 -179 188 229 66 33 chr20 631238 631299 -71522583 - L2 LINE L2 -202 3070 3008 198 296 83 22 chr20 631795 631913 -71521969 - MIR SINE MIR -65 143 60 708 185 7 46 chr20 631989 632102 -71521780 + MER5A DNA MER1_type 2 109 -80 1617 147 65 4 chr20 632102 632381 -71521501 + AluJb SINE Alu 1 296 -16 708 185 7 46 chr20 632381 632418 -71521464 + MER5A DNA MER1_type 109 146 -43 1476 136 36 0 chr20 632480 632731 -71521151 - L1MD3 LINE L1 -3 7992 7733 1831 234 29 39 chr20 633216 633699 -71520183 + MLT1H LTR MaLR 72 549 0 528 305 105 42 chr20 633701 634226 -71519656 + MLT1J LTR MaLR 36 500 -11 446 139 222 9 chr20 634924 635032 -71518850 - MER63 DNA MER1_type -77 759 3 260 283 121 46 chr20 635038 635211 -71518671 - L2 LINE L2 -34 3279 3094 2245 108 0 0 chr20 635271 635576 -71518306 + AluSx SINE Alu 1 305 -7 889 226 51 23 chr20 635595 635812 -71518070 + MIR SINE MIR 36 258 -4 705 328 128 18 chr20 635817 636362 -71517520 - L2 LINE L2 -337 2977 2373 326 331 143 11 chr20 636458 636633 -71517249 + MIR SINE MIR 2 199 -63 2176 192 90 13 chr20 636709 637177 -71516705 + MLT1D LTR MaLR 2 505 0 2105 83 0 0 chr20 637275 637552 -71516330 + AluSx SINE Alu 23 299 -13 396 279 168 37 chr20 637768 638066 -71515816 - L2 LINE L2 -41 3272 2936 432 312 81 6 chr20 638380 638553 -71515329 + MIR SINE MIR 7 192 -70 433 214 70 14 chr20 638612 638748 -71515134 - MIR3 SINE MIR -36 172 34 34 65 0 0 chr20 638944 639006 -71514876 + GC_rich Low_complexity Low_complexity 1 62 0 25 0 0 0 chr20 639101 639126 -71514756 + GC_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr20 639386 639409 -71514473 + GC_rich Low_complexity Low_complexity 1 23 0 945 253 17 11 chr20 639540 639767 -71514115 - MIR SINE MIR -32 230 3 805 252 75 52 chr20 640621 640745 -71513137 - MLT1L LTR MaLR -40 575 455 2020 127 7 0 chr20 640745 641037 -71512845 + AluSx SINE Alu 1 294 -18 805 252 75 52 chr20 641037 641218 -71512664 - MLT1L LTR MaLR -160 455 263 486 298 0 0 chr20 641234 641385 -71512497 + L2 LINE L2 2830 2980 -333 467 233 47 23 chr20 641390 641519 -71512363 - MIR SINE MIR -4 258 127 375 174 92 18 chr20 641721 641830 -71512052 + LTR16C LTR ERVL 375 491 0 686 244 80 10 chr20 641874 642075 -71511807 + MIR SINE MIR 45 259 -3 338 185 43 33 chr20 642143 642235 -71511647 - MLT1K LTR MaLR 0 588 496 1340 274 40 44 chr20 642340 642841 -71511041 - MLT1J LTR MaLR -12 499 1 359 275 63 58 chr20 643008 643197 -71510685 - L2 LINE L2 -5 3308 3119 647 173 18 0 chr20 643218 643328 -71510554 - MLT1A1 LTR MaLR 0 365 254 673 122 15 76 chr20 643330 643461 -71510421 + MLT1A1 LTR MaLR 17 139 -226 423 107 0 0 chr20 643461 643517 -71510365 - Alu SINE Alu -16 296 241 2046 196 25 27 chr20 643517 643957 -71509925 + MLT1-int LTR MaLR 180 618 -1117 233 250 16 0 chr20 644001 644065 -71509817 + MLT1-int LTR MaLR 821 885 -486 392 148 0 0 chr20 644111 644172 -71509710 + MLT-int LTR MaLR 681 741 -994 2284 145 25 27 chr20 644385 644793 -71509089 + MLT1A2-int LTR MaLR 1317 1723 -12 605 110 33 0 chr20 644812 644903 -71508979 + MLT1A2 LTR MaLR 1 94 -280 401 214 36 0 chr20 645005 645089 -71508793 - MLT1L LTR MaLR -337 278 192 1812 112 0 12 chr20 645940 646028 -71507854 + AluSx SINE Alu 48 136 -176 2080 109 16 0 chr20 646028 646331 -71507551 + AluSc SINE Alu 1 308 -1 1812 112 0 12 chr20 646331 646501 -71507381 + AluSx SINE Alu 136 303 -9 252 304 205 9 chr20 646874 646986 -71506896 - L3 LINE CR1 -117 1460 1327 261 128 0 0 chr20 648465 648512 -71505370 + (TAAA)n Simple_repeat Simple_repeat 1 47 0 266 168 50 40 chr20 649990 650091 -71503791 + C-rich Low_complexity Low_complexity 5 106 0 308 286 150 29 chr20 650566 650741 -71503141 - MIR SINE MIR -66 196 3 337 233 0 92 chr20 650753 650873 -71503009 + MIR SINE MIR 105 213 -49 * 465 261 72 0 chr20 650848 650986 -71502896 - MIR SINE MIR -4 258 111 262 229 16 0 chr20 651103 651164 -71502718 + L2 LINE L2 3252 3313 0 226 288 72 27 chr20 651887 651998 -71501884 + L2 LINE L2 3155 3270 -2 502 236 241 11 chr20 652286 652460 -71501422 - MIR SINE MIR 0 262 49 298 259 170 0 chr20 652471 652583 -71501299 + L2 LINE L2 3140 3270 -2 443 254 44 0 chr20 652838 652952 -71500930 + MIR SINE MIR 3 121 -141 631 284 91 0 chr20 652995 653192 -71500690 - MIR SINE MIR 0 262 48 260 255 122 10 chr20 653679 653777 -71500105 + MIR3 SINE MIR 74 182 -26 416 214 255 0 chr20 653874 654019 -71499863 + MIR SINE MIR 81 262 0 292 116 0 0 chr20 654104 654147 -71499735 + MIR SINE MIR 81 123 -85 285 266 45 103 chr20 654303 654487 -71499395 + MIR SINE MIR 18 182 -49 189 222 48 32 chr20 654793 654856 -71499026 - MIR SINE MIR -86 122 59 285 380 83 8 chr20 655077 655315 -71498567 - MIR SINE MIR 0 262 1 240 200 46 15 chr20 656420 656485 -71497397 + MIR SINE MIR 84 150 -112 316 316 98 0 chr20 656789 656922 -71496960 - MIR3 SINE MIR -14 194 49 408 88 0 0 chr20 658240 658297 -71495585 + (TG)n Simple_repeat Simple_repeat 1 57 0 332 89 0 63 chr20 658568 658647 -71495235 + (TCCC)n Simple_repeat Simple_repeat 2 75 0 465 262 93 27 chr20 659179 659362 -71494520 - MIR3 SINE MIR -3 205 11 294 182 0 0 chr20 660185 660251 -71493631 + CT-rich Low_complexity Low_complexity 2 67 0 378 0 0 0 chr20 660251 660293 -71493589 + (CA)n Simple_repeat Simple_repeat 1 42 0 429 20 0 0 chr20 660540 660590 -71493292 + (TG)n Simple_repeat Simple_repeat 2 51 0 202 138 69 35 chr20 661444 661502 -71492380 + (CGCGG)n Simple_repeat Simple_repeat 2 61 0 413 306 6 30 chr20 661816 662038 -71491844 + GA-rich Low_complexity Low_complexity 4 211 0 209 176 0 0 chr20 662620 662654 -71491228 + G-rich Low_complexity Low_complexity 3 36 0 1818 149 0 35 chr20 663146 663457 -71490425 + AluJo SINE Alu 8 308 0 1555 97 5 5 chr20 663744 663951 -71489931 - AluSq SINE Alu -16 297 91 389 256 99 19 chr20 664014 664276 -71489606 + L2 LINE L2 2856 3200 -72 883 232 11 0 chr20 664301 664486 -71489396 + MIR SINE MIR 59 245 -17 638 270 110 30 chr20 664610 664910 -71488972 - L2 LINE L2 -103 3210 2887 207 69 0 0 chr20 664971 665000 -71488882 + (TGAA)n Simple_repeat Simple_repeat 3 31 0 356 288 181 51 chr20 665681 665973 -71487909 + L1ME4a LINE L1 5624 5953 -168 2368 92 0 0 chr20 666061 666353 -71487529 + AluSc SINE Alu 1 292 -17 789 217 118 28 chr20 666620 666832 -71487050 + MIR SINE MIR 32 262 0 205 300 0 17 chr20 666830 666890 -71486992 - MIR SINE MIR -56 206 148 * 328 239 216 8 chr20 667237 667371 -71486511 + MIR3 SINE MIR 20 181 -27 923 281 109 12 chr20 667646 668069 -71485813 - LTR16B LTR ERVL 0 464 1 945 266 20 4 chr20 668087 668339 -71485543 - MIR SINE MIR -5 257 2 237 235 147 29 chr20 668492 668594 -71485288 + L2 LINE L2 2889 3002 -270 920 244 33 8 chr20 668660 668902 -71484980 - MIR SINE MIR -5 257 10 371 259 36 36 chr20 669000 669112 -71484770 + L2 LINE L2 3201 3312 -1 2401 109 0 0 chr20 669281 669592 -71484290 + AluSx SINE Alu 1 311 -1 1881 173 7 3 chr20 669865 670171 -71483711 - AluJo SINE Alu -5 307 1 402 283 17 0 chr20 670171 670300 -71483582 + MIR SINE MIR 43 175 -62 181 276 19 67 chr20 670344 670449 -71483433 - MIR3 SINE MIR -27 181 82 345 324 150 19 chr20 670866 671079 -71482803 + MIR SINE MIR 22 262 0 291 279 45 9 chr20 671301 671412 -71482470 - MIR SINE MIR -58 204 90 1914 155 13 10 chr20 671413 671548 -71482334 + AluSx SINE Alu 1 134 -178 441 0 0 0 chr20 671548 671597 -71482285 + (TAA)n Simple_repeat Simple_repeat 2 50 0 1914 155 13 10 chr20 671597 671795 -71482087 + AluSx SINE Alu 134 312 0 802 280 85 0 chr20 671824 672010 -71481872 - L2 LINE L2 -14 3299 3081 2719 30 0 0 chr20 672010 672308 -71481574 + AluY SINE Alu 1 298 -13 802 280 85 0 chr20 672308 672392 -71481490 - L2 LINE L2 -232 3081 3006 334 250 52 59 chr20 672575 672711 -71481171 + MIR SINE MIR 93 227 -35 466 320 31 35 chr20 672888 673116 -71480766 + LTR67 LTR ERVL 236 462 -95 284 293 71 0 chr20 673292 673391 -71480491 + L2 LINE L2 3208 3313 0 588 341 14 9 chr20 673397 673611 -71480271 - L3 LINE CR1 -398 1179 965 476 281 43 7 chr20 673753 673892 -71479990 + MER117 DNA MER1_type 1 144 -53 1308 172 15 11 chr20 673931 674198 -71479684 + Charlie4 DNA MER1_type 8 275 -1686 264 282 128 40 chr20 674383 674532 -71479350 - L2 LINE L2 -196 3076 2915 390 316 11 17 chr20 675407 675584 -71478298 + MIR SINE MIR 9 184 -78 467 208 87 54 chr20 675658 675807 -71478075 - L2 LINE L2 0 3313 3160 495 253 139 21 chr20 675822 676016 -71477866 + L1MC4 LINE L1 5620 5836 -1972 357 150 0 0 chr20 676026 676086 -71477796 - FLAM_A SINE Alu 0 133 74 5802 217 70 33 chr20 676486 676671 -71477211 + L1MC4 LINE L1 6459 6636 -1406 423 0 0 0 chr20 676671 676718 -71477164 + (TG)n Simple_repeat Simple_repeat 1 47 0 5802 217 70 33 chr20 676718 678058 -71475824 + L1MC4 LINE L1 6636 8040 -2 613 283 62 0 chr20 678076 678316 -71475566 - L2 LINE L2 -152 3161 2907 953 211 29 5 chr20 678316 678525 -71475357 - MLT1E2 LTR MaLR 0 626 413 240 111 0 0 chr20 678525 678561 -71475321 + (T)n Simple_repeat Simple_repeat 1 36 0 1428 206 45 13 chr20 678571 678950 -71474932 - HUERS-P3 LTR ERV1 -8453 466 1 617 157 35 76 chr20 678950 679122 -71474760 - LTR19C LTR ERV1 0 779 615 * 780 207 181 50 chr20 679097 679362 -71474520 - MLT1E2 LTR MaLR -178 448 138 2508 131 33 17 chr20 679362 679590 -71474292 - MSTB LTR MaLR 0 426 186 2131 142 0 6 chr20 679590 679901 -71473981 - AluSx SINE Alu -3 309 1 2508 131 33 17 chr20 679901 680091 -71473791 - MSTB LTR MaLR -240 186 1 780 207 181 50 chr20 680091 680124 -71473758 - MLT1E2 LTR MaLR -488 138 111 451 156 142 78 chr20 680123 680264 -71473618 - MLT1E2 LTR MaLR -504 150 1 * 236 203 51 0 chr20 680266 680345 -71473537 - L2 LINE L2 -360 2912 2830 320 283 22 22 chr20 681046 681184 -71472698 - L1MC4a LINE L1 -1910 5898 5761 949 268 92 9 chr20 681422 681993 -71471889 - L1MC4a LINE L1 -461 5701 5067 768 219 128 45 chr20 682001 682026 -71471856 - L1ME4a LINE L1 -153 5968 5946 2429 73 0 7 chr20 682026 682329 -71471553 - AluY SINE Alu -9 302 2 768 219 128 45 chr20 682329 682677 -71471205 - L1ME4a LINE L1 -175 5946 5564 1714 128 23 79 chr20 683120 683425 -71470457 - AluJb SINE Alu -20 292 5 324 249 76 49 chr20 683612 683797 -71470085 - MER113 DNA MER1_type? -331 190 1 330 258 23 62 chr20 684018 684146 -71469736 - MIR SINE MIR -71 191 69 208 301 49 65 chr20 684264 684387 -71469495 - MIR SINE MIR 0 262 142 374 287 19 83 chr20 684422 684638 -71469244 - L2 LINE L2 -93 3220 3019 2519 81 0 3 chr20 684783 685090 -71468792 + AluSx SINE Alu 1 306 -6 370 253 44 0 chr20 685378 685469 -71468413 + MER91A DNA MER1_type 102 196 0 200 283 33 0 chr20 686234 686294 -71467588 - MIR SINE MIR -122 140 79 1725 138 18 25 chr20 686492 686774 -71467108 - AluJo SINE Alu -2 310 31 262 260 26 13 chr20 686911 686988 -71466894 + GA-rich Low_complexity Low_complexity 4 81 0 1790 89 133 0 chr20 687014 687262 -71466620 + AluSp SINE Alu 1 281 -32 207 0 0 0 chr20 687262 687285 -71466597 + (CAAT)n Simple_repeat Simple_repeat 4 26 0 185 91 0 30 chr20 687300 687333 -71466549 + (GGAA)n Simple_repeat Simple_repeat 2 33 0 654 270 11 0 chr20 687880 688065 -71465817 + MIR SINE MIR 43 229 -33 873 264 231 19 chr20 688301 688412 -71465470 + MLT1G LTR MaLR 10 96 -494 2176 75 24 27 chr20 688412 688725 -71465157 + AluSx SINE Alu 1 312 0 873 264 231 19 chr20 688725 689065 -71464817 + MLT1G LTR MaLR 96 588 -2 561 284 27 0 chr20 689069 689217 -71464665 - MIR SINE MIR -62 200 49 1482 255 56 33 chr20 689730 690158 -71463724 - MLT1J LTR MaLR 0 511 74 284 340 78 5 chr20 690234 690425 -71463457 + L2 LINE L2 2684 2888 -426 2236 119 3 0 chr20 690924 691217 -71462665 - AluSp SINE Alu -19 294 1 274 246 111 18 chr20 691218 691335 -71462547 - MIR SINE MIR -67 141 25 363 246 97 15 chr20 691409 691543 -71462339 - MIR3 SINE MIR -41 167 23 555 199 7 59 chr20 691555 691691 -71462191 - L2 LINE L2 -2 3311 3183 733 275 83 29 chr20 691785 692170 -71461712 - L2 LINE L2 -79 3234 2829 278 241 89 0 chr20 692702 692781 -71461101 + MIR3 SINE MIR 81 166 -42 838 244 43 26 chr20 692789 693019 -71460863 + MIR SINE MIR 29 262 0 363 295 108 23 chr20 693234 693363 -71460519 - MIR3 SINE MIR -27 181 42 1847 157 0 32 chr20 694102 694414 -71459468 - AluJo SINE Alu -10 302 1 282 227 213 57 chr20 694422 694563 -71459319 - MIR SINE MIR -17 245 83 2162 206 23 59 chr20 694699 695272 -71458610 + MER92C LTR ERV1 1 552 -2 185 318 94 57 chr20 695303 695495 -71458387 + MIR SINE MIR 63 261 -1 30 27 0 0 chr20 695881 695918 -71457964 + GC_rich Low_complexity Low_complexity 1 37 0 22 0 0 0 chr20 696000 696022 -71457860 + GC_rich Low_complexity Low_complexity 1 22 0 216 0 0 0 chr20 696972 696996 -71456886 + (TG)n Simple_repeat Simple_repeat 2 25 0 209 59 59 0 chr20 698306 698340 -71455542 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 6365 234 82 48 chr20 698415 698563 -71455319 - L1MEc LINE L1 -3573 2642 2501 2361 94 0 7 chr20 698563 698860 -71455022 - AluSg SINE Alu -15 295 1 6365 234 82 48 chr20 698860 699391 -71454491 - L1MEc LINE L1 -3714 2501 1990 2161 113 25 0 chr20 699391 699674 -71454208 + AluSx SINE Alu 3 292 -20 6365 234 82 48 chr20 699674 701516 -71452366 - L1MEc LINE L1 -4225 1990 40 768 245 57 74 chr20 701518 701960 -71451922 - L2 LINE L2 -275 3038 2583 359 266 22 36 chr20 701981 702120 -71451762 + L1ME3A LINE L1 5991 6127 -43 631 279 11 0 chr20 702197 702380 -71451502 - L2 LINE L2 -710 2604 2420 275 296 99 0 chr20 702374 702455 -71451427 - MIR SINE MIR -17 245 157 * 803 290 120 3 chr20 702471 702771 -71451111 + MLT1K LTR MaLR 254 588 0 1900 170 3 0 chr20 702855 703143 -71450739 - AluJo SINE Alu -23 289 1 293 355 29 6 chr20 703494 703666 -71450216 + L2 LINE L2 2917 3092 -180 316 258 45 38 chr20 703845 703977 -71449905 + MIR3 SINE MIR 15 147 -61 726 228 151 15 chr20 703977 704183 -71449699 + MIR SINE MIR 2 235 -27 466 223 17 0 chr20 704291 704414 -71449468 + MIR3 SINE MIR 31 158 -50 2376 67 3 3 chr20 704527 704856 -71449026 + AluSq SINE Alu 1 329 0 221 327 44 0 chr20 705269 705382 -71448500 + MIR SINE MIR 34 151 -57 278 313 133 5 chr20 705434 705630 -71448252 - LTR16B LTR ERVL -228 222 3 205 273 0 0 chr20 706127 706171 -71447711 + (CA)n Simple_repeat Simple_repeat 2 45 0 528 239 159 0 chr20 706218 706381 -71447501 - MER5A DNA MER1_type 0 189 1 456 324 96 7 chr20 706460 706769 -71447113 - LTR16B LTR ERVL -136 328 31 323 299 95 7 chr20 706795 706932 -71446950 - MIR SINE MIR -22 240 92 266 214 135 0 chr20 707006 707095 -71446787 - MIR SINE MIR -112 150 50 194 196 0 43 chr20 707185 707231 -71446651 - MIR SINE MIR -59 149 106 1420 226 164 5 chr20 707827 708216 -71445666 + MLT1F1 LTR MaLR 109 559 -8 482 274 38 0 chr20 709164 709365 -71444517 + CT-rich Low_complexity Low_complexity 1 208 0 710 253 6 0 chr20 709370 709532 -71444350 + MIR SINE MIR 10 172 -90 520 223 122 0 chr20 710085 710224 -71443658 - MIR SINE MIR -19 243 88 189 0 0 0 chr20 710224 710245 -71443637 + (TGAA)n Simple_repeat Simple_repeat 1 21 0 213 261 0 31 chr20 710282 710347 -71443535 - MIR SINE MIR -103 105 43 2419 96 0 0 chr20 710506 710808 -71443074 - AluSx SINE Alu -10 302 1 401 210 0 0 chr20 710827 710908 -71442974 - MIR SINE MIR -111 151 71 200 139 0 23 chr20 711167 711210 -71442672 + (TTCC)n Simple_repeat Simple_repeat 3 44 0 403 58 0 0 chr20 711248 711300 -71442582 + Alu SINE Alu 1 52 -258 2532 84 3 0 chr20 711580 711891 -71441991 + AluSp SINE Alu 1 312 -1 264 307 58 2 chr20 712040 712168 -71441714 - MIR SINE MIR -55 153 50 221 271 32 47 chr20 712223 712335 -71441547 - MIR SINE MIR -85 123 13 805 190 226 0 chr20 712403 712624 -71441258 - LTR37B LTR ERV1 -1 467 197 387 236 0 11 chr20 712687 712776 -71441106 - LTR37B LTR ERV1 -377 91 4 302 60 100 0 chr20 713350 713450 -71440432 + (TA)n Simple_repeat Simple_repeat 2 111 0 315 49 0 0 chr20 713450 713491 -71440391 + (GA)n Simple_repeat Simple_repeat 2 42 0 2333 38 0 45 chr20 713491 713782 -71440100 - AluSp SINE Alu -34 279 2 212 236 121 73 chr20 715039 715204 -71438678 + L2 LINE L2 2569 2741 -573 2071 120 33 10 chr20 715270 715570 -71438312 + AluSx SINE Alu 1 307 -5 291 28 0 0 chr20 715597 715633 -71438249 + (TCC)n Simple_repeat Simple_repeat 1 36 0 1676 117 140 0 chr20 715633 715898 -71437984 - AluSx SINE Alu 0 302 1 1251 246 35 85 chr20 715899 716092 -71437790 - MLT1J LTR MaLR -67 444 282 2220 106 3 0 chr20 716092 716385 -71437497 - AluY SINE Alu -17 294 1 1251 246 35 85 chr20 716385 716614 -71437268 - MLT1J LTR MaLR -229 282 43 2317 110 0 0 chr20 716624 716916 -71436966 + AluSx SINE Alu 1 292 -20 929 270 25 0 chr20 716970 717211 -71436671 + L1MC4a LINE L1 5619 5865 -1943 1893 224 49 29 chr20 717213 717723 -71436159 + L1ME2 LINE L1 5564 6083 -81 288 296 107 34 chr20 718556 718606 -71435276 - L2 LINE L2 -79 3234 3189 1356 216 82 44 chr20 718606 719019 -71434863 + MLT1C LTR MaLR 1 434 -33 2062 159 0 9 chr20 719019 719334 -71434548 - AluSx SINE Alu 0 312 1 1356 216 82 44 chr20 719334 719370 -71434512 + MLT1C LTR MaLR 434 467 0 288 296 107 34 chr20 719370 719425 -71434457 - L2 LINE L2 -124 3189 3139 279 0 0 0 chr20 719425 719456 -71434426 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 288 296 107 34 chr20 719456 719555 -71434327 - L2 LINE L2 -174 3139 3014 252 0 0 0 chr20 720462 720490 -71433392 + (TG)n Simple_repeat Simple_repeat 2 29 0 523 182 0 0 chr20 720496 720584 -71433298 - FLAM_A SINE Alu -25 117 30 615 171 17 0 chr20 720604 720721 -71433161 - L1ME1 LINE L1 -56 6110 5992 2144 138 7 0 chr20 720775 721079 -71432803 + AluSx SINE Alu 1 306 -6 289 197 30 0 chr20 721086 721152 -71432730 + MLT1C LTR MaLR 40 107 -398 767 273 66 9 chr20 721152 721379 -71432503 + MLT1C LTR MaLR 228 467 0 1834 210 18 13 chr20 721379 721775 -71432107 - L1ME1 LINE L1 -187 5979 5582 1171 140 0 17 chr20 721775 721953 -71431929 + AluSg/x SINE Alu 133 307 -5 1845 161 0 13 chr20 721969 722267 -71431615 + AluJb SINE Alu 12 305 -7 317 137 0 0 chr20 722267 722318 -71431564 - L1ME1 LINE L1 -773 5586 5536 1141 130 243 45 chr20 722356 722603 -71431279 + AluYa5 SINE Alu 1 296 -15 244 160 160 40 chr20 722613 722688 -71431194 + MIR SINE MIR 150 233 -29 344 289 84 22 chr20 722833 723116 -71430766 - LTR16A LTR ERVL -2 448 123 375 273 62 45 chr20 723146 723322 -71430560 - Charlie8 DNA MER1_type -2226 191 13 2323 100 10 3 chr20 723345 723476 -71430406 + AluSq SINE Alu 1 130 -183 324 0 0 0 chr20 723476 723512 -71430370 + (TAA)n Simple_repeat Simple_repeat 2 37 0 2323 100 10 3 chr20 723512 723691 -71430191 + AluSq SINE Alu 130 313 0 198 309 37 12 chr20 723764 723845 -71430037 + L2 LINE L2 3189 3271 -42 916 157 28 15 chr20 723933 724132 -71429750 + L1M4 LINE L1 5290 5492 -686 2554 72 3 0 chr20 724154 724461 -71429421 + AluSp SINE Alu 1 308 -5 724 254 11 37 chr20 724469 724658 -71429224 + MIR SINE MIR 77 260 -2 494 281 33 0 chr20 724674 724827 -71429055 + MIR SINE MIR 51 208 -54 802 177 10 62 chr20 725920 726112 -71427770 - MIR SINE MIR 0 262 81 1022 201 7 126 chr20 726142 726436 -71427446 - LTR8 LTR ERV1 -272 419 161 269 111 44 0 chr20 726428 726473 -71427409 - LTR8A LTR ERV1 -680 47 1 * 253 338 0 0 chr20 726473 726550 -71427332 - MIR SINE MIR -178 84 8 2370 99 0 0 chr20 726788 727090 -71426792 + AluSg SINE Alu 1 302 -8 2095 142 3 3 chr20 727168 727471 -71426411 + AluSx SINE Alu 1 303 -9 2008 122 165 8 chr20 727474 727844 -71426038 + MSTA LTR MaLR 1 428 0 787 213 77 0 chr20 727913 728082 -71425800 - MER63A DNA MER1_type -18 192 11 567 272 7 0 chr20 728119 728255 -71425627 + MIR SINE MIR 2 138 -124 396 0 0 0 chr20 728973 729017 -71424865 + (TC)n Simple_repeat Simple_repeat 1 44 0 279 0 0 0 chr20 729016 729047 -71424835 + (CA)n Simple_repeat Simple_repeat 1 31 0 * 431 282 127 12 chr20 729214 729466 -71424416 + L2 LINE L2 2695 2975 -339 432 265 116 7 chr20 729524 729671 -71424211 + MIR SINE MIR 35 197 -65 325 268 187 28 chr20 729683 729831 -71424051 + MLT1G1 LTR MaLR 3 216 -379 3752 244 21 14 chr20 729831 730648 -71423234 + L1M4b LINE L1 3 825 -6034 3140 235 41 91 chr20 730653 730876 -71423006 + L1M4b LINE L1 1330 1563 -5394 2380 108 0 0 chr20 730876 731181 -71422701 + AluSx SINE Alu 1 305 -7 3140 235 41 91 chr20 731181 732433 -71421449 + L1M4b LINE L1 1563 2876 -4081 1614 161 19 58 chr20 732433 732744 -71421138 + AluSx SINE Alu 3 301 -11 3140 235 41 91 chr20 732744 732893 -71420989 + L1M4b LINE L1 2876 3031 -3926 2345 121 0 3 chr20 732893 733206 -71420676 + AluSx SINE Alu 1 312 0 3140 235 41 91 chr20 733206 733816 -71420066 + L1M4b LINE L1 3031 3670 -3287 2531 80 3 0 chr20 733816 734128 -71419754 + AluSp SINE Alu 1 313 0 3140 235 41 91 chr20 734128 734289 -71419593 + L1M4b LINE L1 3670 3565 -3392 2132 141 3 0 chr20 734289 734594 -71419288 - AluSx SINE Alu -4 308 3 3140 235 41 91 chr20 734594 734870 -71419012 + L1M4b LINE L1 3564 3852 -3105 2341 114 3 0 chr20 734871 735178 -71418704 + AluSx SINE Alu 1 308 -4 1265 117 11 0 chr20 735242 735450 -71418432 + AluY SINE Alu 119 311 0 1368 214 79 66 chr20 735452 735553 -71418329 + L1M4b LINE L1 3904 4002 -2955 2165 145 0 0 chr20 735553 735864 -71418018 + AluSx SINE Alu 1 311 -1 1368 214 79 66 chr20 735864 736066 -71417816 + L1M4b LINE L1 4002 4200 -2757 2229 125 0 3 chr20 736066 736378 -71417504 + AluY SINE Alu 1 311 0 1368 214 79 66 chr20 736378 736591 -71417291 + L1M4b LINE L1 4200 4428 -2529 875 225 51 63 chr20 736595 736966 -71416916 - MLT1H LTR MaLR -194 348 15 1992 115 62 42 chr20 737011 737325 -71416557 + THE1B LTR MaLR 1 325 -39 2122 108 7 0 chr20 737325 737657 -71416225 - AluSg SINE Alu 0 334 1 1992 115 62 42 chr20 737657 737698 -71416184 + THE1B LTR MaLR 325 364 0 223 238 0 32 chr20 737846 737909 -71415973 + MIR SINE MIR 161 221 -41 219 302 0 0 chr20 737957 738010 -71415872 + MIR SINE MIR 210 262 0 * 403 367 11 6 chr20 737966 738146 -71415736 - MIR SINE MIR -33 229 49 340 344 32 11 chr20 738217 738403 -71415479 + L1MC4a LINE L1 5696 5885 -1923 2303 107 7 13 chr20 738625 739040 -71414842 + AluSq SINE Alu 1 313 0 275 311 11 0 chr20 739054 739144 -71414738 - L1ME4a LINE L1 -96 6025 5935 1181 253 49 10 chr20 739146 739454 -71414428 - MLT1J LTR MaLR -181 330 11 1073 133 0 0 chr20 739564 739714 -71414168 - AluSg/x SINE Alu -23 289 140 1389 117 4 46 chr20 739714 739953 -71413929 - MER41B LTR ERV1 -277 358 130 1919 124 37 4 chr20 740394 740704 -71413178 + AluSx SINE Alu 1 319 0 4513 95 32 25 chr20 741079 741121 -71412761 + LTR8 LTR ERV1 2 42 -649 2321 84 14 7 chr20 741121 741418 -71412464 - AluSp SINE Alu -14 299 1 4513 95 32 25 chr20 741418 742060 -71411822 + LTR8 LTR ERV1 42 691 0 2319 114 3 0 chr20 742427 742724 -71411158 - AluSp SINE Alu -15 298 1 2156 144 0 10 chr20 742724 743029 -71410853 - AluJo SINE Alu -10 302 1 465 273 39 0 chr20 743211 743339 -71410543 - MIR SINE MIR -11 251 119 2996 158 74 31 chr20 743635 744093 -71409789 + MER67C LTR ERV1 1 497 -213 2187 124 14 0 chr20 744093 744384 -71409498 - AluSx SINE Alu -17 295 1 2996 158 74 31 chr20 744384 744572 -71409310 + MER67C LTR ERV1 497 675 -35 286 287 248 6 chr20 744599 744756 -71409126 + L1MC4a LINE L1 5741 5935 -1873 306 0 0 0 chr20 744824 744858 -71409024 + (TG)n Simple_repeat Simple_repeat 2 35 0 1932 155 3 10 chr20 745031 745328 -71408554 + AluSx SINE Alu 1 295 -17 1252 112 0 0 chr20 745328 745489 -71408393 + AluSg/x SINE Alu 134 294 -18 1994 138 24 14 chr20 745599 745895 -71407987 - AluSx SINE Alu -8 304 6 390 209 29 38 chr20 746458 746563 -71407319 - MIR SINE MIR -92 170 67 229 286 36 0 chr20 747906 747962 -71405920 + MIR SINE MIR 26 83 -179 728 287 63 4 chr20 749021 749258 -71404624 - MIR SINE MIR 0 262 12 289 346 76 11 chr20 750031 750216 -71403666 - MIR SINE MIR -52 210 14 1125 221 86 93 chr20 750432 751011 -71402871 + MER34C LTR ERV1 11 585 0 2064 128 14 0 chr20 751789 752085 -71401797 - AluSp SINE Alu -13 300 1 2168 75 78 8 chr20 752279 752647 -71401235 + LTR7 LTR ERV1 1 450 0 329 257 107 59 chr20 752647 753181 -71400701 + L1MC4a LINE L1 5260 6006 -1802 2241 108 3 0 chr20 753211 753506 -71400376 - AluY SINE Alu -15 296 1 703 281 31 4 chr20 753799 754027 -71399855 + MIR SINE MIR 29 262 0 218 329 162 9 chr20 754712 754928 -71398954 + L2 LINE L2 2933 3181 -91 589 233 135 10 chr20 755210 755403 -71398479 + MIR SINE MIR 32 248 -14 2339 109 0 0 chr20 755466 755770 -71398112 + AluSx SINE Alu 1 304 -8 775 228 112 94 chr20 755777 755903 -71397979 + MLT1J LTR MaLR 71 193 -318 2708 116 76 48 chr20 755903 756007 -71397875 - MER75 DNA T2_type 0 514 414 2085 123 3 7 chr20 756007 756309 -71397573 - AluSx SINE Alu -11 301 1 2708 116 76 48 chr20 756309 756704 -71397178 - MER75 DNA T2_type -100 414 1 775 228 112 94 chr20 756704 756971 -71396911 + MLT1J LTR MaLR 193 471 -40 1978 156 0 25 chr20 756989 757309 -71396573 + AluSx SINE Alu 1 312 0 209 196 0 0 chr20 758433 758479 -71395403 + T-rich Low_complexity Low_complexity 3 48 0 207 244 77 48 chr20 758499 758656 -71395226 - L2 LINE L2 0 3313 3111 447 224 105 107 chr20 758690 759067 -71394815 - L2 LINE L2 -298 3015 2616 639 224 88 43 chr20 759129 759325 -71394557 - MIR SINE MIR -32 230 30 219 264 61 74 chr20 759779 759927 -71393955 + L2 LINE L2 3077 3222 -91 241 277 8 46 chr20 760330 760460 -71393422 + GA-rich Low_complexity Low_complexity 2 126 0 248 284 12 25 chr20 760606 760687 -71393195 - MIR3 SINE MIR -37 171 92 287 296 0 0 chr20 760736 760807 -71393075 + MIR SINE MIR 73 143 -119 1926 155 3 19 chr20 761119 761429 -71392453 - AluJb SINE Alu -6 306 2 234 218 18 0 chr20 762174 762229 -71391653 + MIR SINE MIR 115 170 -92 611 279 53 0 chr20 762239 762429 -71391453 - MIR SINE MIR -2 260 61 2061 165 93 89 chr20 762463 762804 -71391078 - LTR8A LTR ERV1 0 727 381 2238 113 0 0 chr20 762804 763096 -71390786 + AluSx SINE Alu 1 292 -20 234 29 29 0 chr20 763096 763130 -71390752 + (CAAA)n Simple_repeat Simple_repeat 2 68 0 2061 165 93 89 chr20 763130 763326 -71390556 - LTR8A LTR ERV1 -346 381 187 201 333 0 0 chr20 763396 763453 -71390429 + MIR SINE MIR 200 256 -6 1216 221 129 52 chr20 763621 763860 -71390022 + MER34C LTR ERV1 1 220 -365 2031 109 3 3 chr20 763860 764154 -71389728 - AluSq SINE Alu -8 305 12 1216 221 129 52 chr20 764154 764457 -71389425 + MER34C LTR ERV1 220 585 0 379 111 32 0 chr20 764479 764542 -71389340 + LTR24B LTR ERV1 8 72 -504 782 188 78 0 chr20 764575 764729 -71389153 - FRAM SINE Alu 0 166 1 1308 52 6 0 chr20 764731 764903 -71388979 + LTR19-int LTR ERV1 2085 2257 -3329 301 233 186 0 chr20 764903 764989 -71388893 - LTR8 LTR ERV1 -434 257 156 3137 53 30 30 chr20 764989 765190 -71388692 + LTR19-int LTR ERV1 2346 2546 -3040 2007 105 14 3 chr20 765190 765486 -71388396 + AluSq SINE Alu 1 299 -14 3137 53 30 30 chr20 765486 765720 -71388162 + LTR19-int LTR ERV1 2545 2781 -2805 * 10991 52 40 13 chr20 765718 766211 -71387671 - LTR19-int LTR ERV1 -1329 4257 3779 2209 91 3 10 chr20 766211 766519 -71387363 + AluSp SINE Alu 1 306 -7 10991 52 40 13 chr20 766519 767146 -71386736 - LTR19-int LTR ERV1 -1807 3779 3085 2095 96 7 7 chr20 767146 767439 -71386443 - AluY SINE Alu -18 293 1 10991 52 40 13 chr20 767439 767778 -71386104 - LTR19-int LTR ERV1 -2501 3085 2757 2036 107 4 0 chr20 767812 768093 -71385789 + AluSq SINE Alu 1 282 -31 8914 78 27 16 chr20 768102 768458 -71385424 + LTR19A-int LTR ERV1 4380 4731 -855 2106 121 3 7 chr20 768458 768765 -71385117 + AluSx SINE Alu 1 306 -6 8914 78 27 16 chr20 768765 769602 -71384280 + LTR19A-int LTR ERV1 4731 5586 0 3571 86 15 0 chr20 769602 770081 -71383801 + LTR19A LTR ERV1 1 486 0 3571 137 7 6 chr20 770102 770648 -71383234 - LTR10A LTR ERV1 -62 547 1 6843 182 23 21 chr20 770693 773089 -71380793 - LTR10A-int LTR ERV1 0 6649 4190 2161 69 0 0 chr20 773090 773364 -71380518 - AluSg SINE Alu -4 306 33 810 63 18 0 chr20 773364 773475 -71380407 - AluY SINE Alu -14 297 185 2430 253 54 12 chr20 773479 774073 -71379809 - HERVI LTR ERV1 -2456 5329 4711 * 5025 80 27 0 chr20 774040 774778 -71379104 - HERVI LTR ERV1 -4320 2576 1819 393 216 159 0 chr20 774783 774871 -71379011 + LTR8 LTR ERV1 156 257 -434 567 54 0 0 chr20 774871 774945 -71378937 - Harlequin LTR ERV1 -5178 1718 1645 * 1991 153 3 0 chr20 774944 775244 -71378638 - Harlequin LTR ERV1 -3205 4580 4280 249 204 102 46 chr20 775293 775401 -71378481 + LTR24B LTR ERV1 260 373 -203 2418 135 70 0 chr20 775401 775786 -71378096 - MER84 LTR ERVI 0 507 96 4953 99 34 57 chr20 775786 776583 -71377299 - MER4E LTR ERV1 0 779 1 1130 103 130 5 chr20 776583 776758 -71377124 + MER41B LTR ERV1 434 634 -1 513 66 66 13 chr20 776763 776839 -71377043 - MER84 LTR ERVI -427 80 1 1360 93 15 34 chr20 776896 777100 -71376782 + MER84 LTR ERVI 1 200 -307 1256 140 53 5 chr20 777101 777308 -71376574 + MER4E LTR ERV1 249 465 -314 817 106 0 0 chr20 777365 777469 -71376413 + MER84-int LTR ERV1 2030 2133 -2821 999 185 11 11 chr20 777469 777647 -71376235 + LTR1 LTR ERV1 1 178 -607 1823 167 149 46 chr20 777648 778145 -71375737 + LTR10A LTR ERV1 1 548 -61 772 226 88 33 chr20 778154 778428 -71375454 + LTR10A-int LTR ERV1 1 289 -6360 18573 219 11 28 chr20 778490 785002 -71368880 + LTR10A-int LTR ERV1 501 5708 -941 2250 74 0 35 chr20 785002 785312 -71368570 + AluY SINE Alu 1 299 -12 18573 219 11 28 chr20 785312 786239 -71367643 + LTR10A-int LTR ERV1 5708 6649 0 1850 188 77 70 chr20 786239 786783 -71367099 + LTR10A LTR ERV1 1 548 -61 371 127 0 0 chr20 786796 786851 -71367031 + LTR1 LTR ERV1 176 230 -555 764 170 17 21 chr20 786941 787236 -71366646 + LTR1B LTR ERV1 401 826 0 3961 124 23 20 chr20 787237 787420 -71366462 + MER4A-int LTR ERV1 2131 2312 -2642 1897 120 3 11 chr20 787420 787755 -71366127 + AluSx SINE Alu 1 333 0 3961 124 23 20 chr20 787755 788174 -71365708 + MER4A-int LTR ERV1 2312 2736 -2218 2159 112 0 0 chr20 788174 788470 -71365412 + AluSq SINE Alu 1 296 -17 17067 137 99 79 chr20 788579 789162 -71364720 + MER4A-int LTR ERV1 189 759 -5839 4668 122 19 59 chr20 789162 789451 -71364431 - MER4E LTR ERV1 0 779 480 1844 134 0 7 chr20 789451 789762 -71364120 - AluSx SINE Alu 0 309 1 4668 122 19 59 chr20 789762 790282 -71363600 - MER4E LTR ERV1 -299 480 2 17067 137 99 79 chr20 790282 790490 -71363392 + MER4A-int LTR ERV1 759 961 -5637 1201 170 14 0 chr20 790490 790702 -71363180 - AluSg/x SINE Alu -13 299 85 17067 137 99 79 chr20 790702 793078 -71360804 + MER4A-int LTR ERV1 961 3288 -3310 1997 120 3 0 chr20 793078 793384 -71360498 - AluSx SINE Alu 0 307 1 17067 137 99 79 chr20 793384 793402 -71360480 + MER4A-int LTR ERV1 3288 3304 -3294 2000 116 0 52 chr20 793402 793730 -71360152 - AluSx SINE Alu -1 311 1 17067 137 99 79 chr20 793730 794389 -71359493 + MER4A-int LTR ERV1 3304 3948 -2650 189 0 0 0 chr20 794389 794410 -71359472 + (TTA)n Simple_repeat Simple_repeat 1 21 0 17067 137 99 79 chr20 794410 795666 -71358216 + MER4A-int LTR ERV1 3948 6598 0 3154 130 121 47 chr20 795667 796286 -71357596 + MER4A LTR ERV1 1 465 0 2368 138 0 22 chr20 796286 796585 -71357297 + MER84 LTR ERVI 146 437 -70 2158 125 3 0 chr20 796585 796890 -71356992 - AluSq SINE Alu -6 307 2 2368 138 0 22 chr20 796890 796960 -71356922 + MER84 LTR ERVI 437 507 0 181 238 0 0 chr20 797128 797170 -71356712 - L3b LINE CR1 -198 1385 1344 212 145 0 48 chr20 797211 797246 -71356636 + (TTTAA)n Simple_repeat Simple_repeat 1 33 -26 2115 116 0 0 chr20 797246 797540 -71356342 - AluSq SINE Alu -19 294 1 212 145 0 48 chr20 797540 797566 -71356316 + (TTTAA)n Simple_repeat Simple_repeat 33 59 0 3784 177 39 58 chr20 797698 798671 -71355211 - LTR5 LTR ERVK -14 955 1 2090 132 3 0 chr20 798683 798994 -71354888 - AluSx SINE Alu 0 312 1 4032 134 3 23 chr20 799050 799698 -71354184 + MER41B LTR ERV1 1 635 0 231 369 18 18 chr20 799740 799851 -71354031 + L2 LINE L2 2941 3051 -221 2268 106 0 0 chr20 799992 800304 -71353578 - AluSp SINE Alu -1 312 1 1551 182 0 24 chr20 800356 800678 -71353204 - AluSx SINE Alu 0 315 1 636 232 55 76 chr20 800840 801129 -71352753 - L2 LINE L2 0 3313 3031 249 264 98 52 chr20 801276 801368 -71352514 - L1MC/D LINE L1 -2003 5805 5719 1903 125 14 0 chr20 801368 801665 -71352217 + AluSx SINE Alu 1 301 -11 249 264 98 52 chr20 801665 801746 -71352136 - L1MC/D LINE L1 -2089 5719 5624 287 218 117 5 chr20 802386 802495 -71351387 + AluJ/monomer SINE Alu 1 51 -251 324 48 0 0 chr20 802574 802616 -71351266 + (TG)n Simple_repeat Simple_repeat 1 42 0 1814 84 0 0 chr20 802616 802854 -71351028 - AluSg SINE Alu -33 277 40 1722 82 0 41 chr20 803050 803295 -71350587 - AluSq SINE Alu -78 235 1 222 86 0 0 chr20 803387 803417 -71350465 + (A)n Simple_repeat Simple_repeat 1 31 0 2121 123 0 0 chr20 803417 803727 -71350155 + AluSg SINE Alu 1 310 0 457 340 39 0 chr20 803748 803904 -71349978 + L3 LINE CR1 967 1128 -449 2169 60 39 0 chr20 804339 804623 -71349259 - AluSp SINE Alu -14 299 5 1894 55 65 31 chr20 804640 804932 -71348950 - AluY SINE Alu -9 302 1 742 190 17 0 chr20 805089 805263 -71348619 + CT-rich Low_complexity Low_complexity 4 180 0 1899 76 8 4 chr20 805268 805519 -71348363 - AluSx SINE Alu -23 289 38 187 228 139 0 chr20 805576 805677 -71348205 - L2 LINE L2 -814 2500 2386 619 138 36 7 chr20 806285 806423 -71347459 + CT-rich Low_complexity Low_complexity 3 144 0 1839 164 3 3 chr20 806425 806737 -71347145 - AluJb SINE Alu 0 312 1 334 267 176 6 chr20 806771 806947 -71346935 - L1MC4 LINE L1 -8 8034 7829 330 272 215 21 chr20 807030 807309 -71346573 + MER113 DNA MER1_type? 126 458 -63 685 303 56 19 chr20 807641 807908 -71345974 + L2 LINE L2 2994 3270 -2 2449 65 0 7 chr20 808004 808311 -71345571 - AluSq SINE Alu -8 305 1 532 266 89 87 chr20 808311 808750 -71345132 - L2 LINE L2 -3 3269 2830 220 279 25 0 chr20 809492 809571 -71344311 + MIR SINE MIR 67 147 -61 549 237 18 18 chr20 809626 809795 -71344087 + MER113 DNA MER1_type? 81 249 -272 1041 212 108 7 chr20 809798 810067 -71343815 + L1ME1 LINE L1 5871 6166 0 2083 115 10 10 chr20 810150 810462 -71343420 + AluSx SINE Alu 1 312 0 825 233 11 5 chr20 810513 810713 -71343169 + MLT1A2 LTR MaLR 188 389 -1 2042 132 0 19 chr20 811121 811432 -71342450 - AluSx SINE Alu -7 305 1 398 241 28 0 chr20 811483 811591 -71342291 + MER103 DNA DNA 2 112 -54 619 256 38 76 chr20 811734 811972 -71341910 - L2 LINE L2 -250 3063 2835 294 264 11 44 chr20 812151 812179 -71341703 - MIR SINE MIR -80 182 155 2271 120 22 27 chr20 812179 812545 -71341337 + THE1B LTR MaLR 1 364 0 294 264 11 44 chr20 812545 812607 -71341275 - MIR SINE MIR -107 155 95 225 98 0 73 chr20 812688 812729 -71341153 - MER5B DNA MER1_type -3 175 138 1002 208 162 8 chr20 812729 813051 -71340831 + MLT1F LTR MaLR 2 415 -127 1463 125 30 106 chr20 813155 813484 -71340398 + AluYb8 SINE Alu 1 304 -14 2324 81 37 0 chr20 813633 813930 -71339952 + AluSp SINE Alu 1 308 -5 1744 171 27 10 chr20 813939 814237 -71339645 + AluJb SINE Alu 1 303 -9 2363 107 0 0 chr20 814433 814733 -71339149 - AluSq SINE Alu -13 300 1 1644 227 117 24 chr20 815591 816053 -71337829 + MER69 DNA AcHobo 77 581 -645 328 191 55 22 chr20 816035 816113 -71337769 + MER69 DNA AcHobo 2279 2353 -173 * 1868 135 3 45 chr20 816113 816288 -71337594 - AluJo SINE Alu -3 309 151 2183 138 6 3 chr20 816288 816599 -71337283 - AluSx SINE Alu 0 312 1 1868 135 3 45 chr20 816599 816735 -71337147 - AluJo SINE Alu -161 151 11 328 191 55 22 chr20 816735 816824 -71337058 + MER69 DNA AcHobo 2353 2482 -44 2427 103 3 3 chr20 816825 817136 -71336746 + AluSq SINE Alu 1 311 -2 338 314 20 0 chr20 817296 817398 -71336484 + MIR SINE MIR 118 221 -41 1383 182 121 4 chr20 817907 818171 -71335711 + AluJo SINE Alu 5 299 -13 2037 131 28 0 chr20 818228 818518 -71335364 - AluSx SINE Alu -12 300 3 2065 161 3 0 chr20 818576 818887 -71334995 + AluJo SINE Alu 1 312 0 356 242 167 0 chr20 819023 819155 -71334727 - L1ME LINE L1 -347 5774 5621 253 279 0 0 chr20 819202 819270 -71334612 - MIR SINE MIR -92 116 49 245 119 24 0 chr20 819898 819940 -71333942 - MIR SINE MIR -64 144 102 255 325 75 8 chr20 820484 820604 -71333278 - MIR SINE MIR -101 161 34 252 147 250 0 chr20 820863 820931 -71332951 + MER96B DNA MER1_type? 1 85 -332 333 0 0 0 chr20 821015 821052 -71332830 + (TC)n Simple_repeat Simple_repeat 2 38 0 230 217 0 61 chr20 821052 821167 -71332715 - L1MC4 LINE L1 -1339 6703 6596 196 241 19 0 chr20 821168 821222 -71332660 + MIR SINE MIR 65 119 -89 657 231 136 36 chr20 821875 822096 -71331786 - MIR SINE MIR 0 262 20 3603 125 23 33 chr20 822130 822884 -71330998 - L1MB3 LINE L1 -15 6168 5333 2296 98 3 7 chr20 822893 823200 -71330682 - AluSg1 SINE Alu -3 306 1 476 293 75 0 chr20 823385 823518 -71330364 - MIR SINE MIR -97 165 23 183 300 0 0 chr20 823532 823592 -71330290 - L2 LINE L2 -280 2992 2933 874 219 25 15 chr20 823771 823899 -71329983 + L1MC4 LINE L1 7282 7414 -628 749 204 59 0 chr20 823899 824051 -71329831 + FRAM SINE Alu 4 164 -2 874 219 25 15 chr20 824051 824123 -71329759 + L1MC4 LINE L1 7414 7484 -558 239 79 26 0 chr20 824129 824167 -71329715 + (TTTC)n Simple_repeat Simple_repeat 3 41 0 522 249 175 46 chr20 824317 824667 -71329215 - L2 LINE L2 -107 3165 2776 583 95 0 0 chr20 824668 824752 -71329130 - AluY SINE Alu -10 301 218 235 194 14 68 chr20 824833 824907 -71328975 - MIR SINE MIR -61 147 89 982 175 26 5 chr20 825038 825232 -71328650 + MIR SINE MIR 46 243 -19 503 195 27 47 chr20 826643 826792 -71327090 + MIR SINE MIR 85 230 -32 297 274 20 10 chr20 827954 828056 -71325826 - MIR SINE MIR -98 164 62 21 0 0 0 chr20 828058 828079 -71325803 + GC_rich Low_complexity Low_complexity 1 21 0 324 218 40 142 chr20 828743 828968 -71324914 - L2 LINE L2 -5 3308 3107 235 202 108 0 chr20 829022 829088 -71324794 + MIR SINE MIR 72 144 -64 896 207 5 19 chr20 829197 829405 -71324477 + MER3 DNA MER1_type 5 209 0 365 264 11 0 chr20 830109 830200 -71323682 + MIR SINE MIR 69 160 -102 203 160 13 80 chr20 831122 831197 -71322685 + (CCCCG)n Simple_repeat Simple_repeat 3 72 0 221 200 150 80 chr20 833817 833917 -71319965 - L2 LINE L2 -61 3252 3146 2219 125 0 0 chr20 834827 835124 -71318758 + AluSx SINE Alu 1 297 -15 591 136 0 59 chr20 835154 835272 -71318610 + L1PA10 LINE L1 6058 6168 0 341 268 79 8 chr20 835318 835451 -71318431 - L1MC4 LINE L1 -1 8041 7783 553 258 50 13 chr20 835598 835757 -71318125 - L1ME2 LINE L1 -13 6151 5987 537 152 62 41 chr20 835797 835942 -71317940 - HAL1 LINE L1 -71 2436 2289 375 23 0 0 chr20 835942 835986 -71317896 + (CA)n Simple_repeat Simple_repeat 1 44 0 2224 128 0 0 chr20 835992 836288 -71317594 - AluSx SINE Alu -16 296 1 777 265 50 14 chr20 836328 836547 -71317335 + MIR SINE MIR 18 244 -18 539 228 21 26 chr20 836617 836806 -71317076 - HAL1 LINE L1 -327 2180 1993 267 276 92 20 chr20 836950 837048 -71316834 - L2 LINE L2 -12 3301 3197 712 268 104 0 chr20 837385 837605 -71316277 - MIR SINE MIR -19 243 1 251 276 0 40 chr20 837720 837796 -71316086 - L2 LINE L2 0 3272 3200 195 42 0 0 chr20 837903 837927 -71315955 + (TG)n Simple_repeat Simple_repeat 1 24 0 485 273 166 49 chr20 838047 838457 -71315425 - MLT1H LTR MaLR 0 549 92 2064 108 4 0 chr20 838504 838773 -71315109 - AluSg SINE Alu -40 270 1 257 275 14 0 chr20 838788 838857 -71315025 - MLT1H LTR MaLR -476 73 4 283 305 86 31 chr20 838896 839024 -71314858 + MIR3 SINE MIR 34 168 -40 554 308 106 46 chr20 839058 839425 -71314457 - L2 LINE L2 -11 3261 2873 920 257 94 37 chr20 839501 840020 -71313862 + L2 LINE L2 2763 3313 0 187 229 0 0 chr20 840060 840095 -71313787 + MIR SINE MIR 33 67 -141 217 273 30 0 chr20 840577 840643 -71313239 - MIR SINE MIR -66 142 75 321 47 0 0 chr20 840691 840734 -71313148 + (TG)n Simple_repeat Simple_repeat 1 43 0 299 197 84 14 chr20 840794 840865 -71313017 + MIR SINE MIR 12 87 -175 2178 112 3 0 chr20 840988 841275 -71312607 + AluSg SINE Alu 1 288 -22 290 336 121 27 chr20 841824 842047 -71311835 + L1MC4a LINE L1 5690 5933 -1875 720 179 163 5 chr20 842671 842861 -71311021 - L2 LINE L2 0 3313 3094 1918 238 74 24 chr20 842881 843423 -71310459 - L1ME1 LINE L1 -1 6165 5597 882 249 128 46 chr20 843442 843704 -71310178 - L2 LINE L2 -244 3069 2830 1910 143 28 0 chr20 843704 843990 -71309892 - AluSx SINE Alu -18 294 1 882 249 128 46 chr20 843990 844295 -71309587 - L2 LINE L2 -483 2830 2456 1451 209 27 3 chr20 844304 844605 -71309277 + MLT1E3 LTR MaLR 316 623 -1 385 267 9 0 chr20 844613 844718 -71309164 - MIR3 SINE MIR -6 202 97 394 309 112 0 chr20 845026 845178 -71308704 + MIR SINE MIR 46 214 -48 190 261 54 33 chr20 845209 845301 -71308581 + MIR3 SINE MIR 104 197 -11 606 221 0 8 chr20 845301 845423 -71308459 + MIR SINE MIR 50 170 -92 265 188 206 31 chr20 846310 846407 -71307475 + MIR SINE MIR 4 116 -92 254 325 0 0 chr20 846438 846515 -71307367 - MIR SINE MIR -72 136 60 293 244 35 12 chr20 846706 846792 -71307090 - MIR SINE MIR -76 132 45 641 221 10 72 chr20 846998 847193 -71306689 - MIR SINE MIR -3 259 77 412 310 25 19 chr20 847528 847686 -71306196 + MIR SINE MIR 2 160 -102 623 278 83 81 chr20 847689 848099 -71305783 + MLT1J LTR MaLR 9 419 -92 2676 147 47 81 chr20 848114 848232 -71305650 - L1MC3 LINE L1 0 7785 7665 1752 168 9 32 chr20 848232 848547 -71305335 + AluJo SINE Alu 1 308 -4 2676 147 47 81 chr20 848547 849047 -71304835 - L1MC3 LINE L1 -120 7665 7188 290 247 78 0 chr20 849049 849126 -71304756 - MLT1F1 LTR MaLR -440 127 45 2021 160 0 0 chr20 849367 849660 -71304222 + AluJb SINE Alu 1 293 -19 35 41 0 0 chr20 849665 849714 -71304168 + AT_rich Low_complexity Low_complexity 1 49 0 2529 211 30 13 chr20 849827 850430 -71303452 - MER90 LTR ERV1 -1 613 1 204 125 83 0 chr20 850735 850783 -71303099 - MIR3 SINE MIR -53 155 104 283 211 53 13 chr20 851300 851376 -71302506 + MIR SINE MIR 65 143 -119 280 238 38 0 chr20 851431 851511 -71302371 - MLT1L LTR MaLR 0 615 533 2242 141 0 0 chr20 851698 852010 -71301872 - AluSx SINE Alu 0 312 1 258 257 57 0 chr20 852809 852879 -71301003 - MIR SINE MIR 0 262 189 880 205 118 0 chr20 853014 853243 -71300639 + Charlie4a DNA MER1_type 100 355 -153 426 39 0 0 chr20 853269 853321 -71300561 + (TG)n Simple_repeat Simple_repeat 1 52 0 526 186 0 0 chr20 853321 853407 -71300475 - FLAM_A SINE Alu -30 112 27 2435 62 0 10 chr20 853442 853732 -71300150 - AluY SINE Alu -24 287 1 627 154 15 44 chr20 853733 853869 -71300013 + Charlie4a DNA MER1_type 363 494 -14 411 221 66 41 chr20 853872 853994 -71299888 - MIR SINE MIR -68 194 70 181 300 0 0 chr20 854740 854790 -71299092 + MIR SINE MIR 81 130 -78 2112 142 3 3 chr20 854795 855105 -71298777 - AluSx SINE Alu 0 312 3 913 306 146 3 chr20 855640 856003 -71297879 + MLT1K LTR MaLR 108 522 -66 2191 121 7 0 chr20 856097 856394 -71297488 + AluSx SINE Alu 1 299 -13 554 279 73 45 chr20 856679 856926 -71296956 - MIR SINE MIR -7 255 2 449 252 15 15 chr20 857916 858047 -71295835 - MER103 DNA DNA -12 154 24 201 111 56 0 chr20 859097 859133 -71294749 + G-rich Low_complexity Low_complexity 4 41 0 236 311 13 20 chr20 859321 859472 -71294410 + (TCTCTG)n Simple_repeat Simple_repeat 2 151 0 214 133 0 133 chr20 859617 859700 -71294182 + (TCTCTG)n Simple_repeat Simple_repeat 3 74 0 1870 167 3 23 chr20 860570 860869 -71293013 - AluJb SINE Alu -18 294 2 430 265 124 49 chr20 860916 861101 -71292781 - MIR SINE MIR -44 218 20 599 276 55 55 chr20 861316 861570 -71292312 + MIR SINE MIR 9 262 0 2087 122 3 50 chr20 861698 862019 -71291863 + AluJb SINE Alu 1 306 -6 561 286 93 6 chr20 862361 862543 -71291339 - MIR SINE MIR -14 248 51 1399 142 0 43 chr20 862701 862912 -71290970 + AluJb SINE Alu 87 288 -24 236 305 183 0 chr20 863042 863173 -71290709 + L3 LINE CR1 1419 1573 -4 557 227 188 0 chr20 863280 863456 -71290426 + MIR SINE MIR 48 256 -6 283 369 38 19 chr20 863510 863670 -71290212 - MIR3 SINE MIR -35 173 11 754 240 104 5 chr20 864410 864631 -71289251 + L1ME3 LINE L1 5918 6160 -2 29 70 0 0 chr20 865325 865382 -71288500 + AT_rich Low_complexity Low_complexity 1 57 0 196 216 98 0 chr20 865883 865934 -71287948 + MIR SINE MIR 92 147 -115 389 167 313 0 chr20 865940 866036 -71287846 + MIR SINE MIR 103 228 -34 1787 140 4 11 chr20 866178 866449 -71287433 + AluJo SINE Alu 25 293 -19 769 284 53 25 chr20 866484 866769 -71287113 + MLT1J1 LTR MaLR 153 445 -1 548 271 40 0 chr20 867270 867421 -71286461 - L2 LINE L2 -222 3050 2894 215 342 17 0 chr20 867646 867763 -71286119 - L2 LINE L2 -613 2701 2583 342 185 37 0 chr20 867775 867856 -71286026 - MIR SINE MIR -60 148 65 180 179 0 0 chr20 868637 868676 -71285206 + (CAA)n Simple_repeat Simple_repeat 3 41 0 652 254 42 69 chr20 868867 869084 -71284798 - MIR SINE MIR -32 230 20 532 220 42 8 chr20 870203 870321 -71283561 + L2 LINE L2 3149 3270 -2 250 240 10 94 chr20 870496 870592 -71283290 - MIR3 SINE MIR -30 178 91 237 259 0 12 chr20 870674 870755 -71283127 - MIR SINE MIR -75 133 54 624 294 60 27 chr20 872017 872346 -71281536 + L1MC4a LINE L1 5612 5956 -1852 2080 173 3 0 chr20 872346 872711 -71281171 - MER47A DNA MER2_type 0 366 1 624 294 60 27 chr20 872711 872748 -71281134 + L1MC4a LINE L1 5956 5990 -1818 561 221 8 8 chr20 872758 872880 -71281002 + L2 LINE L2 3192 3313 0 21 36 0 0 chr20 873487 873515 -71280367 + AT_rich Low_complexity Low_complexity 1 28 0 273 125 0 0 chr20 873667 873715 -71280167 + L1MB8 LINE L1 6129 6176 -2 247 64 21 43 chr20 873730 873777 -71280105 + (GGAA)n Simple_repeat Simple_repeat 3 48 0 210 352 9 37 chr20 873862 873970 -71279912 + (CCCCAG)n Simple_repeat Simple_repeat 2 106 0 392 307 6 24 chr20 873980 874146 -71279736 + (CCCTAG)n Simple_repeat Simple_repeat 2 164 0 835 249 194 31 chr20 874457 875110 -71278772 + L2 LINE L2 2378 3178 -135 1756 198 21 0 chr20 875110 875449 -71278433 - MER7A DNA MER2_type 0 346 3 835 249 194 31 chr20 875449 875566 -71278316 + L2 LINE L2 3178 3275 -38 184 233 107 107 chr20 875729 875832 -71278050 + L2 LINE L2 3172 3274 -39 * 201 349 72 46 chr20 875809 876004 -71277878 - L2 LINE L2 -39 3233 3034 698 263 86 74 chr20 876344 876763 -71277119 + L2 LINE L2 2579 2991 -322 643 276 28 37 chr20 876766 876983 -71276899 + L2 LINE L2 3099 3313 0 265 265 36 24 chr20 877136 877219 -71276663 + MIR3 SINE MIR 119 202 -6 576 225 95 12 chr20 877695 877864 -71276018 + MER5A DNA MER1_type 3 185 -4 2107 138 3 0 chr20 878164 878460 -71275422 + AluJb SINE Alu 1 297 -15 680 168 61 0 chr20 878551 878682 -71275200 - FRAM SINE Alu -38 138 1 241 281 245 0 chr20 878747 878943 -71274939 + L2 LINE L2 1940 2183 -1131 967 228 109 16 chr20 878943 879351 -71274531 + Charlie4a DNA MER1_type 1 476 -32 353 294 112 61 chr20 879442 879738 -71274144 + L2 LINE L2 2244 2554 -760 2407 52 28 31 chr20 879841 880168 -71273714 - LTR17 LTR ERV1 -454 326 1 1607 71 5 0 chr20 880170 880381 -71273501 - HERV17 LTR ERV1 -3 8623 8412 220 186 129 43 chr20 880579 880649 -71273233 - MIR3 SINE MIR -47 161 86 243 310 23 0 chr20 881228 881315 -71272567 + MIR SINE MIR 47 135 -127 1422 253 75 10 chr20 881518 881917 -71271965 + L1ME1 LINE L1 5740 6164 -2 738 309 163 3 chr20 882025 882388 -71271494 - L2 LINE L2 -5 3308 2888 351 247 93 16 chr20 882492 882651 -71271231 + MIR SINE MIR 17 185 -62 1605 120 110 6 chr20 882727 883080 -71270802 + LTR7 LTR ERV1 1 450 0 1114 211 14 12 chr20 883080 883488 -71270394 + HERVH LTR ERV1 1 446 -7267 8945 141 10 39 chr20 883575 885102 -71268780 + HERVH LTR ERV1 808 2288 -5425 2435 66 0 20 chr20 885102 885403 -71268479 - AluY SINE Alu -16 295 1 8945 141 10 39 chr20 885403 885482 -71268400 + HERVH LTR ERV1 2288 2368 -5345 2064 119 0 12 chr20 885482 885809 -71268073 + HERVH LTR ERV1 2697 3019 -4694 1220 128 0 0 chr20 885798 885993 -71267889 + HERVH LTR ERV1 4335 4529 -3184 * 3289 88 7 0 chr20 885993 886450 -71267432 + HERVH LTR ERV1 6489 6948 -765 3330 107 5 59 chr20 886504 887076 -71266806 + HERVH LTR ERV1 7173 7713 0 2027 102 47 6 chr20 887076 887450 -71266432 + LTR7 LTR ERV1 1 450 0 1807 179 10 7 chr20 887481 887789 -71266093 + AluJb SINE Alu 1 309 -3 1638 254 37 22 chr20 888146 888634 -71265248 + Charlie4a DNA MER1_type 14 508 0 180 298 0 0 chr20 888668 888715 -71265167 + L2 LINE L2 3145 3191 -81 234 273 83 19 chr20 888744 888863 -71265019 - MIR SINE MIR -69 139 38 683 287 93 20 chr20 889105 889460 -71264422 + L2 LINE L2 2410 2790 -524 297 264 73 27 chr20 889756 889866 -71264016 - MIR3 SINE MIR -32 176 62 525 354 29 26 chr20 890182 890473 -71263409 - L1MC4a LINE L1 -1910 5898 5604 1686 144 0 36 chr20 890473 890750 -71263132 - AluJo SINE Alu -8 304 38 525 354 29 26 chr20 890750 890803 -71263079 - L1MC4a LINE L1 -2204 5604 5553 647 295 118 14 chr20 890945 891233 -71262649 + L2 LINE L2 2996 3313 0 211 283 120 0 chr20 891553 891645 -71262237 - L2 LINE L2 -1 3312 3210 510 276 205 0 chr20 891681 891866 -71262016 - MIR SINE MIR -27 235 13 2037 223 61 21 chr20 891878 892399 -71261483 + MLT1F LTR MaLR 1 542 0 251 185 148 56 chr20 892975 893083 -71260799 + L2 LINE L2 3188 3305 -8 546 229 127 13 chr20 893389 893546 -71260336 - MIR SINE MIR -9 253 79 525 358 63 36 chr20 894104 894551 -71259331 + L2 LINE L2 2812 3270 -2 312 305 29 0 chr20 894761 894866 -71259016 + MIR SINE MIR 33 140 -68 636 256 128 0 chr20 894889 895092 -71258790 + MIR SINE MIR 9 237 -25 320 276 114 0 chr20 895206 895311 -71258571 - MIR SINE MIR -72 190 74 811 316 9 0 chr20 895409 895637 -71258245 - MIR SINE MIR -11 251 22 769 254 94 5 chr20 895954 896167 -71257715 + MIR SINE MIR 19 250 -12 200 250 18 45 chr20 897407 897519 -71256363 + (CAGAGA)n Simple_repeat Simple_repeat 3 111 0 849 194 0 0 chr20 897525 897664 -71256218 + FRAM SINE Alu 7 145 -31 504 156 0 0 chr20 897668 897777 -71256105 + GA-rich Low_complexity Low_complexity 1 109 0 361 267 33 8 chr20 898445 898565 -71255317 + GA-rich Low_complexity Low_complexity 5 127 0 281 210 48 97 chr20 898731 898855 -71255027 + MIR3 SINE MIR 37 154 -54 201 121 0 0 chr20 898976 899009 -71254873 + (ATG)n Simple_repeat Simple_repeat 1 33 0 660 304 113 12 chr20 899948 900274 -71253608 - L2 LINE L2 0 3313 2955 215 297 115 11 chr20 900273 900455 -71253427 - L2 LINE L2 -526 2788 2588 * 860 283 121 42 chr20 900756 901552 -71252330 + L2 LINE L2 2437 3312 -1 255 239 0 0 chr20 902450 902538 -71251344 + (CA)n Simple_repeat Simple_repeat 1 88 0 209 373 32 0 chr20 903031 903157 -71250725 + MIR SINE MIR 16 145 -63 757 209 158 0 chr20 903225 903402 -71250480 + MIR SINE MIR 48 252 -10 682 252 7 0 chr20 904002 904149 -71249733 + MER45A DNA AcHobo 31 178 0 407 332 146 5 chr20 904270 904475 -71249407 + MIR SINE MIR 28 261 -1 1728 196 25 3 chr20 904485 904842 -71249040 + MLT1A1 LTR MaLR 1 365 0 300 111 0 0 chr20 904949 904994 -71248888 + (TTCC)n Simple_repeat Simple_repeat 2 46 0 2127 143 7 0 chr20 904999 905306 -71248576 - AluSx SINE Alu -3 309 1 211 288 157 65 chr20 905306 905459 -71248423 + L2 LINE L2 2687 2853 -461 1016 298 99 47 chr20 906080 906574 -71247308 - MLT1K LTR MaLR -45 543 24 278 144 45 117 chr20 906641 906752 -71247130 - MIR3 SINE MIR -21 187 85 219 149 0 0 chr20 907419 907459 -71246423 + MIR SINE MIR 115 153 -109 1365 262 139 43 chr20 907490 907993 -71245889 - MLT1G1 LTR MaLR -2 593 32 2104 130 0 0 chr20 907993 908327 -71245555 - AluSx SINE Alu 0 334 1 1365 262 139 43 chr20 908327 908361 -71245521 - MLT1G1 LTR MaLR -563 32 3 391 292 25 40 chr20 908983 909185 -71244697 - L1ME4a LINE L1 -1 6120 5922 888 118 0 0 chr20 909281 909408 -71244474 + FLAM_C SINE Alu 2 128 -5 2143 133 3 0 chr20 909445 909745 -71244137 + AluSx SINE Alu 1 301 -11 285 318 76 47 chr20 910070 910598 -71243284 - L1ME4a LINE L1 -202 5919 5379 1053 216 206 64 chr20 910612 911093 -71242789 + MLT1H LTR MaLR 1 549 0 399 275 107 0 chr20 911109 911240 -71242642 + MIR SINE MIR 59 203 -59 1911 145 22 19 chr20 911489 911800 -71242082 + AluSx SINE Alu 1 312 0 2905 195 20 4 chr20 911801 912339 -71241543 - MER41D LTR ERV1 -10 547 1 338 167 33 89 chr20 912342 912432 -71241450 - MER41D-int LTR ERV1 -10 7195 7111 2726 294 29 23 chr20 912572 913346 -71240536 - MER41D-int LTR ERV1 -260 7496 6714 5112 98 17 22 chr20 913346 914129 -71239753 - MER4E LTR ERV1 0 779 1 2726 294 29 23 chr20 914129 914278 -71239604 - MER41D-int LTR ERV1 -1042 6714 6567 971 283 16 35 chr20 914394 914761 -71239121 - MER41D-int LTR ERV1 -1401 6355 5996 607 124 72 0 chr20 914765 914862 -71239020 - MER49 LTR ERV1 -204 719 616 * 1048 190 27 81 chr20 914855 915150 -71238732 - MER49 LTR ERV1 -642 281 3 * 1584 156 36 22 chr20 915150 915523 -71238359 - MER41D-int LTR ERV1 -35 6723 6363 507 179 219 0 chr20 915512 915635 -71238247 - MER41D-int LTR ERV1 -625 6133 5984 * 735 159 0 138 chr20 915841 915955 -71237927 - MER41D-int LTR ERV1 -4167 3953 3875 1978 162 0 14 chr20 915955 916252 -71237630 - AluSx SINE Alu -18 294 2 735 159 0 138 chr20 916252 916332 -71237550 - MER41D-int LTR ERV1 -4245 3875 3786 2656 155 51 88 chr20 916514 917784 -71236098 - MER41D-int LTR ERV1 -2148 4183 1720 800 162 8 1 chr20 918282 918424 -71235458 - MER41D-int LTR ERV1 -3015 3661 1506 378 125 0 16 chr20 918414 918478 -71235404 - MER41D-int LTR ERV1 -568 1218 1156 * 25 65 0 0 chr20 918478 918524 -71235358 + AT_rich Low_complexity Low_complexity 1 46 0 2002 166 0 3 chr20 918528 918841 -71235041 + AluJo SINE Alu 1 312 0 1173 169 4 30 chr20 918851 919087 -71234795 - LTR57-int LTR ERVL -4658 685 456 313 176 67 28 chr20 919446 919547 -71234335 - MER41D-int LTR ERV1 -5851 95 1 2855 197 16 2 chr20 919547 920096 -71233786 - MER41D LTR ERV1 0 557 1 293 236 16 110 chr20 920740 920867 -71233015 + MIR SINE MIR 112 226 -36 184 323 0 15 chr20 920999 921064 -71232818 - MIR SINE MIR -63 145 82 451 286 82 15 chr20 921212 921418 -71232464 + MIR SINE MIR 28 247 -15 921 280 89 32 chr20 921672 921921 -71231961 + L2 LINE L2 2922 3200 -113 1745 193 22 16 chr20 921921 921991 -71231891 - MLT1A1 LTR MaLR 0 365 297 1968 123 41 10 chr20 921991 922284 -71231598 + AluSx SINE Alu 1 302 -10 1745 193 22 16 chr20 922284 922576 -71231306 - MLT1A1 LTR MaLR -68 297 1 921 280 89 32 chr20 922576 922697 -71231185 + L2 LINE L2 3200 3313 0 270 237 0 0 chr20 922718 922777 -71231105 - L2 LINE L2 -14 3258 3200 595 165 0 0 chr20 922875 922984 -71230898 + MSTA LTR MaLR 1 109 -319 364 227 114 8 chr20 922992 923124 -71230758 + L1M4 LINE L1 3804 3949 -2197 4980 58 0 0 chr20 923124 923762 -71230120 - L1PA7 LINE L1 -4 6150 5513 1941 148 34 0 chr20 923762 924086 -71229796 + MSTA LTR MaLR 94 428 0 362 298 69 23 chr20 924214 924345 -71229537 - MIR3 SINE MIR -63 145 9 313 242 88 0 chr20 924449 924540 -71229342 - MLT1K LTR MaLR -81 507 409 544 270 130 36 chr20 924709 925084 -71228798 + MLT1J LTR MaLR 59 511 0 226 269 39 39 chr20 925547 925651 -71228231 + MIR SINE MIR 24 127 -135 379 283 41 62 chr20 925847 926154 -71227728 + MLT1J2 LTR MaLR 31 408 -38 274 303 42 49 chr20 926436 926578 -71227304 - MIR SINE MIR -8 254 114 876 260 70 57 chr20 926666 927123 -71226759 - L2 LINE L2 -31 3282 2820 204 200 0 0 chr20 927299 927344 -71226538 + CT-rich Low_complexity Low_complexity 1 45 0 1037 240 80 96 chr20 927473 927681 -71226201 - MER41C LTR ERV1 -9 545 335 1946 135 17 3 chr20 927681 927969 -71225913 + AluJb SINE Alu 14 305 -7 1037 240 80 96 chr20 927969 928098 -71225784 - MER41C LTR ERV1 -219 335 205 2279 94 0 7 chr20 928098 928417 -71225465 - AluY SINE Alu 0 311 1 1037 240 80 96 chr20 928417 928629 -71225253 - MER41C LTR ERV1 -349 205 4 290 274 77 0 chr20 928632 928749 -71225133 + MIR3 SINE MIR 33 158 -50 * 479 264 74 0 chr20 928745 928866 -71225016 + MIR SINE MIR 61 190 -72 1428 145 137 24 chr20 928973 929228 -71224654 + AluJb SINE Alu 1 284 -28 4970 117 50 25 chr20 929228 929880 -71224002 - MER4D LTR ERV1 -38 865 186 2001 101 59 7 chr20 929880 930168 -71223714 - AluSx SINE Alu -9 303 1 4970 117 50 25 chr20 930168 930359 -71223523 - MER4D LTR ERV1 -717 186 1 427 273 97 3 chr20 931174 931354 -71222528 + MIR SINE MIR 11 249 -13 381 384 69 16 chr20 931707 932085 -71221797 - L1MC4a LINE L1 -1901 5907 5510 629 328 64 0 chr20 932317 932552 -71221330 + MIR SINE MIR 13 262 0 215 223 38 2 chr20 933073 933134 -71220748 + MIR SINE MIR 85 141 -67 343 333 8 25 chr20 933441 933561 -71220321 - L1MC4a LINE L1 -1878 5930 5813 869 138 31 25 chr20 933724 933884 -71219998 - THE1C LTR MaLR -45 330 170 338 256 124 16 chr20 933884 934013 -71219869 - L1MC4a LINE L1 -2043 5765 5623 1912 216 77 17 chr20 934018 934762 -71219120 + L1MC/D LINE L1 4930 5740 -743 1816 162 17 45 chr20 934765 935123 -71218759 - THE1C LTR MaLR 0 375 28 709 128 17 0 chr20 935123 935240 -71218642 + AluSc SINE Alu 178 296 -13 765 238 31 9 chr20 935243 935470 -71218412 - L2 LINE L2 -144 3169 2938 190 169 67 112 chr20 936044 936133 -71217749 + MIR SINE MIR 59 143 -65 369 316 117 23 chr20 936134 936400 -71217482 + L1ME LINE L1 5370 5660 -510 2142 141 3 0 chr20 936542 936912 -71216970 + AluSx SINE Alu 5 375 0 2461 99 0 0 chr20 936987 937299 -71216583 - AluSx SINE Alu 0 312 1 227 364 0 0 chr20 937579 937678 -71216204 + MIR SINE MIR 139 237 -25 322 333 72 9 chr20 938094 938317 -71215565 - MIR SINE MIR -15 247 5 654 312 48 82 chr20 938769 939178 -71214704 - L1MC4a LINE L1 -1748 6060 5682 2304 77 0 7 chr20 939178 939485 -71214397 - AluY SINE Alu 0 305 1 654 312 48 82 chr20 939485 939766 -71214116 - L1MC4a LINE L1 -2126 5682 5393 532 244 19 19 chr20 939962 940118 -71213764 + MIR SINE MIR 101 256 -6 517 200 86 100 chr20 940139 940265 -71213617 - MIR SINE MIR -1 261 138 2585 43 13 3 chr20 940265 940569 -71213313 + AluY SINE Alu 1 307 -4 517 200 86 100 chr20 940569 940652 -71213230 - MIR SINE MIR -124 138 55 588 223 104 75 chr20 940727 940982 -71212900 - MLT1G LTR MaLR -2 588 286 350 233 0 0 chr20 941378 941451 -71212431 + L2 LINE L2 3241 3313 0 185 328 31 0 chr20 941628 941692 -71212190 + MIR SINE MIR 186 251 -11 1733 209 0 0 chr20 941800 942111 -71211771 + AluJo SINE Alu 1 311 -1 313 198 22 77 chr20 943118 943209 -71210673 + L1MCa LINE L1 1979 2064 -4362 2161 129 10 3 chr20 943213 943515 -71210367 + AluJo SINE Alu 1 304 -8 183 80 0 0 chr20 943518 943543 -71210339 + (CA)n Simple_repeat Simple_repeat 2 26 0 297 253 21 32 chr20 943691 943786 -71210096 - MER5A DNA MER1_type -69 120 27 308 282 23 46 chr20 943824 943955 -71209927 - MIR SINE MIR -59 149 22 431 217 12 42 chr20 944917 945083 -71208799 + G-rich Low_complexity Low_complexity 5 165 0 184 149 85 0 chr20 945218 945265 -71208617 + MIR SINE MIR 82 132 -76 292 234 8 23 chr20 945866 945999 -71207883 + GA-rich Low_complexity Low_complexity 1 130 0 252 271 24 0 chr20 946015 946100 -71207782 + GA-rich Low_complexity Low_complexity 1 87 0 215 133 22 0 chr20 946115 946160 -71207722 + GA-rich Low_complexity Low_complexity 2 47 0 252 306 102 10 chr20 946754 946852 -71207030 - MIR SINE MIR 0 262 156 312 229 0 0 chr20 947613 947696 -71206186 + (CCCA)n Simple_repeat Simple_repeat 4 86 0 581 228 6 0 chr20 947709 947871 -71206011 + (CCCA)n Simple_repeat Simple_repeat 4 166 0 644 274 110 48 chr20 947888 948242 -71205640 - L2 LINE L2 0 3313 2938 182 273 0 0 chr20 948556 948600 -71205282 + MIR SINE MIR 47 90 -172 748 263 0 22 chr20 948669 948848 -71205034 + MIR SINE MIR 52 226 -36 434 328 149 13 chr20 948934 949309 -71204573 + MER20B DNA MER1_type 27 452 -331 605 254 12 12 chr20 949391 949564 -71204318 + MER20B DNA MER1_type 611 783 0 198 0 0 0 chr20 949988 950010 -71203872 + (CAGA)n Simple_repeat Simple_repeat 2 23 0 221 317 156 10 chr20 950201 950406 -71203476 - L2 LINE L2 -221 3051 2817 382 311 0 0 chr20 950522 950612 -71203270 - L1MC4 LINE L1 -1339 6703 6614 321 242 0 0 chr20 950644 950706 -71203176 - L1MC4 LINE L1 -1339 6703 6642 191 256 122 0 chr20 950739 950821 -71203061 - MIR SINE MIR -94 168 77 350 336 0 16 chr20 950878 951003 -71202879 - L2 LINE L2 0 3313 3191 656 270 20 15 chr20 951577 951781 -71202101 + L2 LINE L2 3109 3313 0 731 264 8 72 chr20 952181 952431 -71201451 - MIR SINE MIR -7 255 22 1675 158 44 11 chr20 952431 952746 -71201136 + AluJo SINE Alu 1 324 0 187 328 16 0 chr20 953368 953432 -71200450 - MIR SINE MIR -86 122 58 1931 244 16 5 chr20 954082 954508 -71199374 + MLT1J LTR MaLR 74 504 -7 1938 167 20 0 chr20 954884 955184 -71198698 + AluJo SINE Alu 1 306 -6 215 208 0 21 chr20 956096 956144 -71197738 + CT-rich Low_complexity Low_complexity 4 50 0 1827 160 10 10 chr20 956686 956992 -71196890 - AluJo SINE Alu -6 306 1 896 209 68 0 chr20 957042 957219 -71196663 - MER5A DNA MER1_type 0 189 1 437 255 47 63 chr20 957220 957518 -71196364 + L1ME3 LINE L1 5650 5948 -214 21 0 0 0 chr20 957612 957633 -71196249 + AT_rich Low_complexity Low_complexity 1 21 0 470 256 70 58 chr20 957870 957916 -71195966 + MLT1J LTR MaLR 19 63 -448 2061 133 0 3 chr20 957916 958216 -71195666 - AluJb SINE Alu -13 299 1 470 256 70 58 chr20 958216 958341 -71195541 + MLT1J LTR MaLR 63 192 -319 298 225 62 12 chr20 958857 958937 -71194945 - MIR SINE MIR -63 145 62 294 283 71 10 chr20 959152 959251 -71194631 - MIR3 SINE MIR -28 180 76 1653 99 5 14 chr20 959290 959561 -71194321 - AluSg/x SINE Alu 0 334 66 564 269 78 42 chr20 960387 960776 -71193106 + MLT1K LTR MaLR 150 588 0 233 192 77 0 chr20 961555 961607 -71192275 - L2 LINE L2 -3 3269 3214 578 244 75 12 chr20 961632 961792 -71192090 + MIR SINE MIR 79 248 -14 270 298 230 12 chr20 961878 962039 -71191843 + MIR SINE MIR 47 242 -20 576 253 101 17 chr20 962676 962854 -71191028 + Charlie8 DNA MER1_type 84 276 -2141 1084 144 11 11 chr20 962967 963155 -71190727 - MER5A DNA MER1_type 0 189 2 594 245 14 14 chr20 963173 963320 -71190562 + MIR SINE MIR 36 182 -80 668 296 5 23 chr20 964027 964247 -71189635 + MIR SINE MIR 41 256 -6 574 274 121 18 chr20 964805 965028 -71188854 + L2 LINE L2 2341 2586 -728 444 308 100 23 chr20 965031 965203 -71188679 + L2 LINE L2 2842 2999 -314 1410 281 7 26 chr20 965203 965655 -71188227 + LTR47B LTR ERVL 1 443 0 444 308 100 23 chr20 965655 965833 -71188049 + L2 LINE L2 2999 3219 -94 509 243 62 8 chr20 965946 966100 -71187782 - MIR SINE MIR -79 129 4 251 224 30 69 chr20 966585 966704 -71187178 - MER5A DNA MER1_type 0 189 63 213 273 0 18 chr20 966891 966946 -71186936 - MIR SINE MIR -99 163 110 2125 120 3 0 chr20 967093 967385 -71186497 + AluSx SINE Alu 1 293 -19 212 0 0 35 chr20 967388 967417 -71186465 + (TAAAA)n Simple_repeat Simple_repeat 5 32 0 232 239 0 0 chr20 968394 968440 -71185442 + L2 LINE L2 3261 3306 -7 240 313 24 12 chr20 969023 969106 -71184776 + MIR SINE MIR 23 106 -102 232 197 167 15 chr20 969477 969543 -71184339 + MIR SINE MIR 105 180 -82 549 232 96 0 chr20 969664 969789 -71184093 - MIR SINE MIR -85 177 41 2194 115 0 10 chr20 969906 970202 -71183680 + AluSg SINE Alu 1 293 -17 387 250 22 0 chr20 970592 970684 -71183198 + MIR3 SINE MIR 82 175 -33 1081 144 7 7 chr20 970693 971200 -71182682 + (TCCA)n Simple_repeat Simple_repeat 1 685 0 241 234 0 0 chr20 971200 971247 -71182635 - L2 LINE L2 0 3313 3267 273 278 0 56 chr20 971351 971441 -71182441 + L2 LINE L2 3188 3272 0 306 281 25 46 chr20 972604 972800 -71181082 + L1M3 LINE L1 5258 5449 -731 258 327 30 0 chr20 972898 972999 -71180883 - MIR SINE MIR -65 143 40 250 236 236 11 chr20 973257 973346 -71180536 + MIR SINE MIR 32 140 -122 1990 151 0 16 chr20 973356 973661 -71180221 + AluJo SINE Alu 3 302 -10 709 257 229 12 chr20 973690 974320 -71179562 - L2 LINE L2 -2 3270 2497 189 244 183 37 chr20 974310 974392 -71179490 + MIR SINE MIR 163 256 -6 * 2271 123 0 0 chr20 974393 974701 -71179181 - AluSx SINE Alu -4 308 1 470 282 93 39 chr20 975077 975294 -71178588 + MIR SINE MIR 16 243 -19 182 273 23 0 chr20 975322 975366 -71178516 + L2 LINE L2 3250 3294 -19 206 280 0 0 chr20 975571 975621 -71178261 + MIR SINE MIR 114 163 -99 418 297 30 13 chr20 975771 975974 -71177908 - MIR SINE MIR -19 243 38 555 165 31 0 chr20 976282 976409 -71177473 + CT-rich Low_complexity Low_complexity 2 132 0 219 129 0 0 chr20 976413 976444 -71177438 + (TC)n Simple_repeat Simple_repeat 2 32 0 732 203 0 0 chr20 976957 977090 -71176792 - FLAM_A SINE Alu 0 133 1 463 300 150 40 chr20 977338 977791 -71176091 + L1M2 LINE L1 1737 4247 -2601 365 0 0 0 chr20 978114 978165 -71175717 - AluSp/q SINE Alu 0 303 253 229 229 16 16 chr20 978176 978237 -71175645 - MIR SINE MIR -122 140 80 366 280 134 25 chr20 978428 978585 -71175297 - MIR SINE MIR -42 220 47 421 217 0 0 chr20 978692 978775 -71175107 - MIR SINE MIR -117 145 63 343 277 21 43 chr20 979325 979466 -71174416 + MIR SINE MIR 47 184 -78 245 209 23 105 chr20 979482 979568 -71174314 + MIR SINE MIR 7 85 -177 346 171 29 0 chr20 979569 979639 -71174243 + MER116 DNA Mariner 4 75 -5 355 173 62 12 chr20 979647 979728 -71174154 + MIR SINE MIR 108 192 -70 722 238 132 5 chr20 979748 979937 -71173945 + MIR SINE MIR 13 225 -37 2183 118 0 24 chr20 980417 980714 -71173168 - AluSx SINE Alu -22 290 1 218 293 94 12 chr20 980887 981016 -71172866 + MIR3 SINE MIR 56 202 -6 275 369 15 0 chr20 981174 981304 -71172578 + MIR SINE MIR 60 191 -71 251 343 157 0 chr20 981484 981618 -71172264 + MIR SINE MIR 28 182 -80 231 323 0 0 chr20 981723 981785 -71172097 + (CA)n Simple_repeat Simple_repeat 2 63 0 258 143 77 55 chr20 981787 981878 -71172004 + MER112 DNA MER1_type 60 152 -108 448 228 43 0 chr20 981945 982037 -71171845 + MER58C DNA MER1_type 118 213 -2 356 102 0 17 chr20 982057 982116 -71171766 + (CATTC)n Simple_repeat Simple_repeat 2 59 0 272 220 34 0 chr20 982395 982454 -71171428 - MER58 DNA MER1_type -25 2395 130 236 309 0 15 chr20 982519 982587 -71171295 + L2 LINE L2 3235 3301 -12 379 262 82 33 chr20 982858 982980 -71170902 + MIR SINE MIR 24 151 -111 180 188 0 0 chr20 983244 983276 -71170606 - L2 LINE L2 -19 3294 3263 247 328 35 34 chr20 983604 983782 -71170100 - MIR3 SINE MIR -64 144 12 347 316 85 24 chr20 983813 984031 -71169851 - MIR SINE MIR -15 247 13 231 287 66 33 chr20 984543 984665 -71169217 + L2 LINE L2 3146 3271 -1 1915 116 3 89 chr20 984836 985163 -71168719 - AluJb SINE Alu -11 301 3 267 147 191 0 chr20 985194 985262 -71168620 - MER103 DNA DNA -85 81 1 277 196 22 141 chr20 985676 985717 -71168165 - MIR3 SINE MIR -24 184 157 2223 107 0 0 chr20 985717 986019 -71167863 - AluSx SINE Alu 0 302 1 277 196 22 141 chr20 986019 986068 -71167814 - MIR3 SINE MIR -51 157 104 504 236 19 9 chr20 986104 986210 -71167672 + MIR SINE MIR 39 145 -63 578 283 16 2 chr20 986417 986582 -71167300 - MIR SINE MIR -21 187 12 236 320 75 34 chr20 986908 987055 -71166827 + MIR SINE MIR 76 228 -34 22 35 0 0 chr20 988076 988105 -71165777 + GC_rich Low_complexity Low_complexity 1 29 0 23 0 0 0 chr20 988207 988230 -71165652 + GC_rich Low_complexity Low_complexity 1 23 0 22 56 0 0 chr20 988240 988276 -71165606 + GC_rich Low_complexity Low_complexity 1 36 0 534 279 78 22 chr20 989075 989254 -71164628 - MIR SINE MIR -5 257 69 2463 96 0 3 chr20 989382 989695 -71164187 - AluSx SINE Alu 0 312 1 273 385 7 7 chr20 989907 990050 -71163832 - MIR3 SINE MIR -23 185 43 482 292 172 43 chr20 990057 990486 -71163396 + L2 LINE L2 2781 3272 0 441 274 280 26 chr20 990684 991110 -71162772 + L2 LINE L2 2787 3313 0 203 355 36 36 chr20 991124 991262 -71162620 + MIR3 SINE MIR 71 208 0 658 138 24 67 chr20 991641 991790 -71162092 - MLT1J2 LTR MaLR -311 139 14 214 256 198 0 chr20 991806 991892 -71161990 + L2 LINE L2 2589 2691 -623 278 157 20 0 chr20 991978 992029 -71161853 + MER81 DNA DNA 1 52 -62 4397 223 49 36 chr20 992054 992214 -71161668 - L1MD1 LINE L1 -122 6120 5964 1960 136 25 0 chr20 992214 992500 -71161382 - AluJb SINE Alu -19 293 1 4397 223 49 36 chr20 992500 994308 -71159574 - L1MD1 LINE L1 -278 5964 3639 1162 204 225 43 chr20 994287 994357 -71159525 + L1MDb LINE L1 732 788 -5621 * 2325 108 3 3 chr20 994357 994662 -71159220 + AluSx SINE Alu 1 305 -7 1162 204 225 43 chr20 994662 995031 -71158851 + L1MDb LINE L1 788 1251 -5158 713 228 35 93 chr20 995038 995328 -71158554 + LTR16C LTR ERVL 218 490 -1 1026 209 48 4 chr20 996003 996233 -71157649 + MIR SINE MIR 23 262 0 376 235 96 0 chr20 996425 996540 -71157342 - MIR3 SINE MIR -24 184 59 298 301 98 21 chr20 997646 997789 -71156093 + MIR SINE MIR 103 256 -6 982 254 98 0 chr20 997836 998072 -71155810 + MIR SINE MIR 4 262 0 743 280 177 24 chr20 998341 998759 -71155123 - L2 LINE L2 0 3313 2832 322 192 36 34 chr20 999103 999242 -71154640 - MIR SINE MIR -63 145 3 498 239 155 0 chr20 999591 999746 -71154136 + LTR16C LTR ERVL 149 327 -164 743 252 98 28 chr20 1000117 1000403 -71153479 + L2 LINE L2 2867 3172 -141 1705 126 0 8 chr20 1000654 1000936 -71152946 + AluSq SINE Alu 47 326 0 478 270 44 19 chr20 1001064 1001223 -71152659 - MLT1J LTR MaLR -348 163 1 220 244 0 0 chr20 1001740 1001797 -71152085 + MIR SINE MIR 97 143 -65 2195 144 0 0 chr20 1002100 1002413 -71151469 - AluSq SINE Alu 0 313 1 297 289 118 0 chr20 1002417 1002552 -71151330 + L2 LINE L2 2231 2381 -933 201 206 0 82 chr20 1002602 1002675 -71151207 + C-rich Low_complexity Low_complexity 3 69 0 658 209 58 62 chr20 1002820 1003045 -71150837 + LTR16C LTR ERVL 160 383 -108 383 267 17 17 chr20 1003210 1003326 -71150556 + L2 LINE L2 2934 3049 -223 249 227 83 83 chr20 1003414 1003546 -71150336 - L2 LINE L2 -1 3271 3140 656 224 75 0 chr20 1003681 1003842 -71150040 + MER58A DNA MER1_type 34 206 -18 603 133 11 51 chr20 1003854 1003990 -71149892 - MLT1F LTR MaLR -46 547 389 286 167 0 0 chr20 1003965 1004013 -71149869 - MLT1F LTR MaLR -293 249 202 * 570 298 81 10 chr20 1004029 1004227 -71149655 - MIR SINE MIR -48 214 3 243 282 51 54 chr20 1004744 1004879 -71149003 + MIR SINE MIR 20 154 -54 356 279 81 22 chr20 1005099 1005235 -71148647 - MIR SINE MIR -71 191 48 196 200 31 0 chr20 1005291 1005356 -71148526 + (TCCA)n Simple_repeat Simple_repeat 1 67 0 224 266 9 0 chr20 1005394 1005503 -71148379 + (TCCA)n Simple_repeat Simple_repeat 3 112 0 383 230 28 0 chr20 1005555 1005812 -71148070 + (TCCA)n Simple_repeat Simple_repeat 1 264 0 1013 280 134 27 chr20 1005818 1006307 -71147575 - L2 LINE L2 -3 3310 2755 340 251 102 58 chr20 1006540 1006735 -71147147 - MIR SINE MIR -49 213 13 228 340 87 13 chr20 1006818 1006968 -71146914 - MIR3 SINE MIR -20 188 28 528 263 40 17 chr20 1007521 1007722 -71146160 + MIR SINE MIR 41 252 -10 288 279 141 66 chr20 1008450 1008755 -71145127 + MLT1K LTR MaLR 261 588 0 327 362 14 14 chr20 1008801 1008942 -71144940 + MIR3 SINE MIR 5 145 -63 438 267 20 62 chr20 1009325 1009354 -71144528 + L1MC4a LINE L1 5178 5207 -939 1799 166 82 0 chr20 1009354 1009685 -71144197 - MER46B DNA MER2_type 0 236 4 438 267 20 62 chr20 1009685 1009850 -71144032 + L1MC4a LINE L1 5207 5364 -782 230 232 12 73 chr20 1009851 1009933 -71143949 + L1MC4a LINE L1 5456 5532 -589 551 305 30 30 chr20 1009934 1010134 -71143748 + L2 LINE L2 3114 3313 0 431 308 91 18 chr20 1010185 1010526 -71143356 + L1MC4a LINE L1 5564 5929 -1879 2111 105 4 4 chr20 1010539 1010867 -71143015 + AluSg SINE Alu 3 330 0 198 103 0 0 chr20 1010893 1010922 -71142960 + (TCCA)n Simple_repeat Simple_repeat 1 29 0 586 279 78 7 chr20 1011061 1011344 -71142538 - L1ME3A LINE L1 -12 6158 5856 1881 191 71 28 chr20 1011410 1011903 -71141979 - L1MC4 LINE L1 -285 7757 7244 6477 77 44 3 chr20 1011925 1012405 -71141477 - L1PA13 LINE L1 -11 6152 5693 2285 130 0 0 chr20 1012405 1012713 -71141169 - AluSx SINE Alu -4 308 1 6477 77 44 3 chr20 1012713 1013340 -71140542 - L1PA13 LINE L1 -470 5693 5024 451 280 25 65 chr20 1015193 1015393 -71138489 + MIR SINE MIR 48 239 -23 323 332 151 11 chr20 1015497 1015762 -71138120 + L2 LINE L2 2955 3256 -16 400 211 189 11 chr20 1015958 1016053 -71137829 - MER81 DNA DNA -2 112 1 227 295 21 53 chr20 1016149 1016186 -71137696 + LTR67 LTR ERVL 81 169 -385 328 146 0 0 chr20 1016186 1016241 -71137641 + MLT1J2 LTR MaLR 72 126 -324 * 739 238 155 0 chr20 1016208 1016460 -71137422 + MLT1L LTR MaLR 196 486 -129 2233 197 65 121 chr20 1016468 1016752 -71137130 + L1ME3 LINE L1 5142 5441 -721 2256 107 3 0 chr20 1016752 1017043 -71136839 + AluSp SINE Alu 3 294 -19 2233 197 65 121 chr20 1017043 1017829 -71136053 + L1ME3 LINE L1 5441 6160 -2 408 320 20 70 chr20 1018008 1018127 -71135755 - MIR SINE MIR -65 197 90 2073 111 10 0 chr20 1018127 1018425 -71135457 - AluSx SINE Alu -11 301 1 408 320 20 70 chr20 1018425 1018505 -71135377 - MIR SINE MIR -172 90 8 255 213 150 0 chr20 1018703 1018783 -71135099 + Charlie7 DNA MER1_type 14 105 -2507 * 262 216 32 48 chr20 1018776 1018901 -71134981 + Charlie7 DNA MER1_type 2440 2562 -50 800 203 6 0 chr20 1018994 1019152 -71134730 - FRAM SINE Alu -12 164 6 595 173 0 38 chr20 1019193 1019326 -71134556 + L1MA4 LINE L1 6173 6300 0 229 250 91 91 chr20 1019365 1019585 -71134297 - HAL1 LINE L1 -473 2034 1815 514 271 121 53 chr20 1019669 1020098 -71133784 + MLT1H LTR MaLR 35 539 -10 284 135 19 0 chr20 1020103 1020155 -71133727 - HAL1 LINE L1 -762 1745 1693 1593 246 127 14 chr20 1020162 1020651 -71133231 + MLT1H1 LTR MaLR 10 552 -3 381 222 174 107 chr20 1020746 1021223 -71132659 - HAL1 LINE L1 -1425 1082 574 312 344 99 18 chr20 1021230 1021451 -71132431 - HAL1 LINE L1 -2001 506 268 460 283 213 22 chr20 1022038 1022310 -71131572 + L2 LINE L2 2990 3313 0 528 254 148 0 chr20 1023480 1023649 -71130233 - MIR SINE MIR 0 262 69 438 256 17 26 chr20 1023699 1023816 -71130066 + L2 LINE L2 3197 3312 -1 633 203 105 7 chr20 1024411 1024564 -71129318 - MIR SINE MIR -10 252 85 274 244 146 12 chr20 1024811 1024893 -71128989 - MIR3 SINE MIR -10 198 106 235 247 173 80 chr20 1025346 1025508 -71128374 + L3 LINE CR1 996 1172 -405 1804 140 56 0 chr20 1025682 1025968 -71127914 + AluSx SINE Alu 1 302 -10 715 283 123 49 chr20 1025969 1026456 -71127426 + Charlie1b DNA MER1_type 1 523 0 249 380 10 0 chr20 1026456 1026556 -71127326 + L3 LINE CR1 1366 1466 -111 984 320 78 12 chr20 1026645 1027205 -71126677 + L2 LINE L2 2714 3312 -1 201 121 0 0 chr20 1027215 1027248 -71126634 + (TGAA)n Simple_repeat Simple_repeat 4 36 0 407 283 108 0 chr20 1027959 1028079 -71125803 + L2 LINE L2 3180 3312 -1 649 239 78 58 chr20 1028093 1028298 -71125584 - MIR SINE MIR -50 212 4 370 245 129 52 chr20 1028307 1028462 -71125420 + MIR SINE MIR 70 236 -26 365 283 51 0 chr20 1028779 1028918 -71124964 - MIR SINE MIR -55 153 5 903 283 100 6 chr20 1029116 1029466 -71124416 - LTR16A LTR ERVL -8 442 60 404 239 127 14 chr20 1029613 1029755 -71124127 - MIR SINE MIR -62 200 43 231 309 84 46 chr20 1029829 1030091 -71123791 - L2 LINE L2 -86 3186 2915 425 254 179 17 chr20 1031162 1031335 -71122547 - MLT1K LTR MaLR -12 576 376 307 226 98 53 chr20 1031552 1031685 -71122197 - MIR SINE MIR -93 169 31 282 283 0 0 chr20 1031824 1031983 -71121899 + (TGGA)n Simple_repeat Simple_repeat 4 162 0 188 289 105 53 chr20 1032438 1032590 -71121292 - MIR3 SINE MIR -21 187 28 730 262 109 23 chr20 1032767 1033023 -71120859 - L2 LINE L2 -8 3305 3028 1066 226 131 27 chr20 1033039 1033397 -71120485 + MLT1J2 LTR MaLR 16 381 -69 737 291 216 12 chr20 1033432 1033844 -71120038 - L2 LINE L2 -343 2971 2476 1468 245 134 31 chr20 1034514 1035053 -71118829 + MLT1G1 LTR MaLR 1 594 -1 293 292 50 50 chr20 1035467 1035587 -71118295 - L2 LINE L2 -1 3312 3193 635 278 87 57 chr20 1035587 1035736 -71118146 + L2 LINE L2 2920 3063 -250 1893 145 10 3 chr20 1035736 1036039 -71117843 - AluSx SINE Alu -7 305 1 635 278 87 57 chr20 1036039 1036256 -71117626 + L2 LINE L2 3063 3297 -16 776 235 107 21 chr20 1036764 1036998 -71116884 + MIR SINE MIR 4 257 -5 892 186 27 27 chr20 1037102 1037285 -71116597 + L2 LINE L2 3127 3309 -4 26 30 0 0 chr20 1037819 1037852 -71116030 + AT_rich Low_complexity Low_complexity 1 33 0 544 289 57 0 chr20 1038193 1038352 -71115530 + MIR SINE MIR 20 187 -75 189 260 40 0 chr20 1038369 1038419 -71115463 - L2 LINE L2 -11 3261 3210 375 290 99 0 chr20 1039145 1039276 -71114606 - MIR SINE MIR -23 239 96 210 269 170 35 chr20 1039471 1039642 -71114240 + MIR SINE MIR 39 232 -30 1624 134 6 113 chr20 1039642 1039977 -71113905 + AluSx SINE Alu 2 300 -2 374 240 33 16 chr20 1040101 1040222 -71113660 + L1ME4a LINE L1 5960 6082 -39 1939 122 3 3 chr20 1040496 1040783 -71113099 - AluSx SINE Alu -25 287 1 285 246 52 44 chr20 1040854 1040976 -71112906 + MER5A DNA MER1_type 9 141 -48 196 313 0 45 chr20 1041012 1041079 -71112803 - MIR3 SINE MIR -43 165 102 217 284 25 12 chr20 1041417 1041498 -71112384 + MIR SINE MIR 111 192 -70 274 347 113 16 chr20 1041708 1041956 -71111926 + L2 LINE L2 2636 2907 -407 1643 170 87 32 chr20 1042774 1043144 -71110738 + MLT1B LTR MaLR 1 390 0 705 214 49 86 chr20 1043170 1043413 -71110469 - MER106A DNA MER1_type 0 236 3 470 281 87 56 chr20 1043438 1043656 -71110226 + MLT1L LTR MaLR 200 470 -145 1940 117 14 0 chr20 1043656 1043938 -71109944 - AluSq SINE Alu -27 286 1 470 281 87 56 chr20 1043938 1044085 -71109797 + MLT1L LTR MaLR 470 611 -4 453 275 155 40 chr20 1044091 1044342 -71109540 - MLT1K LTR MaLR -302 286 7 289 286 109 54 chr20 1044547 1044694 -71109188 - L2 LINE L2 0 3272 3118 764 299 48 81 chr20 1045104 1045295 -71108587 - LTR16A LTR ERVL 0 450 277 748 97 0 18 chr20 1045295 1045409 -71108473 + L1MA2 LINE L1 6193 6304 0 764 299 48 81 chr20 1045409 1045611 -71108271 - LTR16A LTR ERVL -173 277 70 325 299 37 0 chr20 1045938 1046045 -71107837 - MIR SINE MIR -3 259 149 579 232 222 40 chr20 1046820 1047162 -71106720 - MLT1H LTR MaLR -25 384 30 240 250 0 0 chr20 1047336 1047384 -71106498 + L2 LINE L2 2995 3042 -271 278 326 33 0 chr20 1047473 1047565 -71106317 + MIR SINE MIR 60 154 -108 454 189 189 8 chr20 1047573 1047705 -71106177 - MLT1L LTR MaLR -2 613 458 436 20 0 0 chr20 1047758 1047809 -71106073 + MADE1 DNA Mariner 2 52 -28 557 57 0 0 chr20 1047812 1047882 -71106000 + MADE1 DNA Mariner 7 76 -4 270 77 0 96 chr20 1047862 1047914 -71105968 + MADE1 DNA Mariner 32 78 -2 * 457 316 163 3 chr20 1048418 1048706 -71105176 + L2 LINE L2 1873 2206 -1108 * 1001 204 6 0 chr20 1048704 1048885 -71104997 - MER5A DNA MER1_type -6 183 2 * 1779 322 93 16 chr20 1048885 1048917 -71104965 + L2 LINE L2 2172 2200 -1113 728 225 23 17 chr20 1048917 1049090 -71104792 - MER5B DNA MER1_type -3 175 2 1779 322 93 16 chr20 1049090 1050114 -71103768 + L2 LINE L2 2200 3298 -15 212 313 0 0 chr20 1050114 1050162 -71103720 + polypurine Low_complexity Low_complexity 5 52 0 274 321 64 9 chr20 1050330 1050439 -71103443 + L2 LINE L2 3158 3272 0 327 233 381 0 chr20 1050974 1051163 -71102719 + L2 LINE L2 2905 3165 -148 21 95 0 0 chr20 1051178 1051241 -71102641 + AT_rich Low_complexity Low_complexity 1 63 0 2295 100 0 0 chr20 1051500 1051801 -71102081 - AluSc SINE Alu -8 301 1 1493 265 47 22 chr20 1051884 1052630 -71101252 - L1MEc LINE L1 -4714 1880 934 1540 271 149 17 chr20 1053199 1053842 -71100040 + L2 LINE L2 1252 1979 -1335 391 264 11 0 chr20 1053844 1053935 -71099947 + L2 LINE L2 2081 2172 -1142 969 181 65 138 chr20 1053965 1054335 -71099547 - MLT1A1 LTR MaLR -22 343 1 320 277 71 9 chr20 1054339 1054451 -71099431 + L2 LINE L2 2186 2304 -1010 513 296 90 17 chr20 1054708 1055052 -71098830 - L1ME LINE L1 -533 5629 5261 257 284 61 41 chr20 1055169 1055366 -71098516 - L1ME3A LINE L1 -5 6165 5965 2531 245 49 50 chr20 1055450 1055863 -71098019 - L1MC5 LINE L1 -429 7532 7120 1649 177 32 62 chr20 1055863 1056264 -71097618 + MLT1B LTR MaLR 1 389 -1 2531 245 49 50 chr20 1056264 1056920 -71096962 - L1MC5 LINE L1 -841 7120 6471 229 278 67 100 chr20 1057156 1057323 -71096559 - HAL1b LINE L1 -690 658 487 2161 106 0 0 chr20 1057323 1057616 -71096266 + AluSx SINE Alu 1 293 -19 229 278 67 100 chr20 1057616 1057787 -71096095 - HAL1b LINE L1 -861 487 312 2257 89 3 0 chr20 1057787 1058091 -71095791 + AluSg SINE Alu 1 305 -5 229 278 67 100 chr20 1058091 1058363 -71095519 - HAL1b LINE L1 -1036 312 67 1316 178 50 23 chr20 1058846 1059105 -71094777 - MLT1C LTR MaLR -201 266 1 2091 136 120 26 chr20 1059450 1059690 -71094192 - MSTA LTR MaLR 0 428 135 2052 132 0 0 chr20 1059690 1059993 -71093889 + AluSx SINE Alu 1 303 -9 2091 136 120 26 chr20 1059993 1060143 -71093739 - MSTA LTR MaLR -293 135 1 229 263 32 0 chr20 1060438 1060533 -71093349 + MER113 DNA MER1_type? 39 136 -385 26 50 0 0 chr20 1060533 1060573 -71093309 + AT_rich Low_complexity Low_complexity 1 40 0 1216 263 22 19 chr20 1060927 1061084 -71092798 + MER113 DNA MER1_type? 156 311 -210 919 127 0 15 chr20 1061084 1061218 -71092664 + FLAM_C SINE Alu 1 132 -1 1216 263 22 19 chr20 1061218 1061425 -71092457 + MER113 DNA MER1_type? 311 521 0 351 204 57 34 chr20 1061505 1061593 -71092289 - MLT1H LTR MaLR -6 543 454 494 253 71 45 chr20 1061680 1061834 -71092048 - MLT1H LTR MaLR -226 323 166 266 213 82 16 chr20 1061848 1061909 -71091973 - MLT1H LTR MaLR -484 65 1 1968 122 3 7 chr20 1062457 1062752 -71091130 + AluSx SINE Alu 1 294 -18 1962 216 61 49 chr20 1062812 1063711 -71090171 - L1MDa LINE L1 -3413 3127 2205 249 260 52 10 chr20 1063711 1063807 -71090075 + MER69 DNA AcHobo 2412 2511 -15 1802 134 30 23 chr20 1063817 1064116 -71089766 + AluSx SINE Alu 3 303 -9 1851 114 0 0 chr20 1064597 1064851 -71089031 - AluSx SINE Alu -58 254 1 704 230 29 113 chr20 1064855 1065199 -71088683 + L2 LINE L2 2988 3302 -11 198 0 0 0 chr20 1065199 1065221 -71088661 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 798 264 55 78 chr20 1065843 1066104 -71087778 - MER102b DNA MER1_type -1102 326 72 2128 204 131 17 chr20 1066104 1066632 -71087250 - MLT1G LTR MaLR -2 588 1 798 264 55 78 chr20 1066632 1066677 -71087205 - MER102b DNA MER1_type -1356 72 27 1924 155 82 12 chr20 1067072 1067413 -71086469 + MLT1A1 LTR MaLR 1 365 0 272 271 113 40 chr20 1067560 1067711 -71086171 - MIR SINE MIR -71 191 30 191 305 126 46 chr20 1067729 1067903 -71085979 - L2 LINE L2 -421 2893 2706 339 293 91 47 chr20 1068263 1068516 -71085366 + MLT1K LTR MaLR 210 473 -115 190 225 7 176 chr20 1068607 1068659 -71085223 + MIR SINE MIR 102 117 -145 2270 122 0 0 chr20 1068659 1068963 -71084919 + AluSx SINE Alu 1 304 -8 190 225 7 176 chr20 1068963 1069052 -71084830 + MIR SINE MIR 117 219 -43 248 227 0 0 chr20 1069077 1069143 -71084739 + L1M4 LINE L1 4489 4554 -1592 1390 195 38 30 chr20 1069259 1069629 -71084253 + MER93b LTR ERV1 1 373 0 925 272 66 12 chr20 1069662 1069997 -71083885 + MLT1I LTR MaLR 39 391 -18 22 0 0 0 chr20 1070161 1070183 -71083699 + AT_rich Low_complexity Low_complexity 1 22 0 456 214 90 28 chr20 1070197 1070342 -71083540 - MER103 DNA DNA -12 154 1 335 260 49 123 chr20 1070435 1070639 -71083243 - MIR SINE MIR -58 204 16 600 238 8 16 chr20 1070968 1071094 -71082788 + MER5A DNA MER1_type 62 186 -3 311 290 39 19 chr20 1071096 1071251 -71082631 + MLT1L LTR MaLR 145 302 -313 290 301 171 22 chr20 1071280 1071596 -71082286 - MLT1J LTR MaLR -27 484 122 534 258 6 30 chr20 1072000 1072167 -71081715 + MIR SINE MIR 86 248 -14 252 59 0 0 chr20 1072872 1072906 -71080976 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 180 290 58 14 chr20 1072955 1073024 -71080858 - L2 LINE L2 0 3272 3201 189 262 16 16 chr20 1073128 1073189 -71080693 - L2 LINE L2 -227 3086 3026 548 268 167 35 chr20 1073315 1073662 -71080220 - MLT1I LTR MaLR 0 409 17 220 289 0 67 chr20 1073684 1073774 -71080108 - L2 LINE L2 -289 2983 2900 416 315 219 0 chr20 1073819 1073965 -71079917 - MIR SINE MIR -83 179 2 424 298 160 45 chr20 1074056 1074505 -71079377 - Charlie8 DNA MER1_type -1891 526 26 2067 234 14 14 chr20 1074540 1075028 -71078854 + MLT1F LTR MaLR 1 488 -54 775 191 78 0 chr20 1075084 1075225 -71078657 - MER58A DNA MER1_type 0 157 6 211 260 41 14 chr20 1075920 1075993 -71077889 + GA-rich Low_complexity Low_complexity 1 75 0 243 297 93 25 chr20 1076183 1076301 -71077581 - MLT1K LTR MaLR -317 271 146 225 224 9 75 chr20 1076287 1076394 -71077488 - MLT1L LTR MaLR -402 213 114 * 487 283 121 56 chr20 1076798 1077120 -71076762 - L2 LINE L2 -94 3178 2836 2239 96 24 0 chr20 1077145 1077438 -71076444 - AluSg SINE Alu -10 300 1 349 230 20 79 chr20 1077785 1077937 -71075945 + L1ME LINE L1 5619 5761 -360 186 294 59 15 chr20 1078027 1078095 -71075787 + MER5C DNA MER1_type 20 90 -234 297 229 14 0 chr20 1078452 1078522 -71075360 - MLT1J LTR MaLR -332 179 109 3584 156 55 35 chr20 1078957 1078991 -71074891 - MER44D DNA MER2_type -1882 605 573 2419 97 0 0 chr20 1078991 1079299 -71074583 - AluSc SINE Alu -1 308 1 3584 156 55 35 chr20 1079299 1079957 -71073925 - MER44D DNA MER2_type -1914 573 27 327 235 0 0 chr20 1079965 1080063 -71073819 + (TA)n Simple_repeat Simple_repeat 1 98 0 22 0 0 0 chr20 1080225 1080247 -71073635 + AT_rich Low_complexity Low_complexity 1 22 0 225 182 73 0 chr20 1080285 1080340 -71073542 + Charlie8 DNA MER1_type 2356 2414 -3 377 263 46 66 chr20 1081029 1081181 -71072701 - MIR3 SINE MIR -29 179 31 224 343 0 57 chr20 1081293 1081363 -71072519 - MIR SINE MIR -111 97 32 221 298 115 0 chr20 1081495 1081599 -71072283 + MIR SINE MIR 77 192 -70 300 27 0 0 chr20 1081680 1081717 -71072165 + (TG)n Simple_repeat Simple_repeat 2 38 0 286 286 12 0 chr20 1081738 1081822 -71072060 + CT-rich Low_complexity Low_complexity 2 86 0 243 0 0 0 chr20 1081990 1082017 -71071865 + (A)n Simple_repeat Simple_repeat 1 27 0 2535 259 67 10 chr20 1082359 1083494 -71070388 - L1ME3A LINE L1 -9 6161 4960 1343 178 39 70 chr20 1083497 1083852 -71070030 - MLT1A2 LTR MaLR 0 374 31 532 271 122 7 chr20 1083914 1084202 -71069680 - L1ME3A LINE L1 -1194 4952 4632 185 260 40 0 chr20 1084769 1084819 -71069063 - MIR SINE MIR 0 262 211 4417 170 49 53 chr20 1084822 1084954 -71068928 - L1ME1 LINE L1 -2 6663 6532 1401 113 19 0 chr20 1084954 1085166 -71068716 + L1MC1 LINE L1 6118 6333 0 4417 170 49 53 chr20 1085166 1085929 -71067953 - L1ME1 LINE L1 -133 6532 5767 1992 91 0 36 chr20 1085929 1086205 -71067677 - AluSq SINE Alu -7 306 41 4417 170 49 53 chr20 1086205 1086606 -71067276 - L1ME1 LINE L1 -898 5767 5366 2286 118 0 10 chr20 1086606 1086919 -71066963 + AluSg SINE Alu 1 310 0 4417 170 49 53 chr20 1086919 1087647 -71066235 - L1ME1 LINE L1 -1299 5366 4654 24 0 0 0 chr20 1087746 1087770 -71066112 + AT_rich Low_complexity Low_complexity 1 24 0 5483 191 63 88 chr20 1087794 1088818 -71065064 - L1ME1 LINE L1 -4574 2072 1137 1797 148 22 11 chr20 1088818 1089096 -71064786 - AluJo SINE Alu -13 299 19 5483 191 63 88 chr20 1089096 1090206 -71063676 - L1ME1 LINE L1 -5509 1137 1 894 169 40 58 chr20 1090207 1090415 -71063467 - MIR SINE MIR -43 219 18 478 261 51 14 chr20 1090445 1090583 -71063299 + MIR3 SINE MIR 24 166 -42 703 191 190 13 chr20 1091061 1091363 -71062519 + L2 LINE L2 2780 3132 -181 226 231 66 33 chr20 1092285 1092376 -71061506 - MIR SINE MIR -41 221 128 779 143 102 168 chr20 1092436 1092848 -71061034 + LTR37A LTR ERV1 42 426 0 320 259 0 25 chr20 1092969 1093050 -71060832 - MIR SINE MIR -60 148 81 222 37 0 0 chr20 1093061 1093088 -71060794 + (TG)n Simple_repeat Simple_repeat 2 28 0 413 209 0 23 chr20 1093353 1093439 -71060443 - MIR SINE MIR -156 106 23 371 234 298 13 chr20 1093452 1093610 -71060272 + MIR SINE MIR 47 249 -13 199 225 0 0 chr20 1093578 1093618 -71060264 + L2 LINE L2 3263 3302 -11 * 446 283 129 39 chr20 1093641 1093874 -71060008 - MIR SINE MIR 0 262 9 685 185 0 30 chr20 1093886 1094021 -71059861 - L2 LINE L2 0 3313 3183 505 293 155 0 chr20 1094712 1094893 -71058989 + MIR SINE MIR 4 212 -50 1353 213 67 6 chr20 1095336 1095697 -71058185 + L1ME1 LINE L1 5503 5885 -281 228 185 19 19 chr20 1096068 1096122 -71057760 + LTR16A LTR ERVL 381 434 -16 812 199 43 78 chr20 1096123 1096216 -71057666 + L1ME1 LINE L1 5903 5998 -336 2222 155 75 10 chr20 1096216 1096616 -71057266 + MSTB LTR MaLR 1 426 0 812 199 43 78 chr20 1096616 1096807 -71057075 + L1ME1 LINE L1 5998 6332 -2 313 213 38 0 chr20 1096838 1096918 -71056964 + L1ME1 LINE L1 6068 6150 -16 2355 96 0 0 chr20 1096924 1097215 -71056667 + AluSx SINE Alu 1 291 -21 373 171 38 38 chr20 1097231 1097336 -71056546 + MER97a DNA MER1_type? 759 863 -31 3076 189 16 0 chr20 1097347 1098071 -71055811 + L1M3 LINE L1 4717 5448 -732 851 137 8 15 chr20 1098072 1098203 -71055679 + FLAM_C SINE Alu 1 130 -13 794 115 21 103 chr20 1098203 1098365 -71055517 + L1MC/D LINE L1 5441 5575 -596 374 193 12 0 chr20 1098365 1098443 -71055439 + L1MB4 LINE L1 6097 6180 0 794 115 21 103 chr20 1098443 1098469 -71055413 + L1MC/D LINE L1 5575 5602 -569 879 95 0 0 chr20 1098478 1098594 -71055288 - AluY SINE Alu -11 300 185 229 260 26 13 chr20 1098733 1098810 -71055072 + L1MB7 LINE L1 2983 3060 -3086 * 250 253 25 13 chr20 1098794 1098873 -71055009 + L1MB7 LINE L1 2981 3060 -3086 238 234 26 13 chr20 1098974 1099051 -71054831 + L1MB7 LINE L1 2972 3049 -3097 229 260 26 13 chr20 1099170 1099247 -71054635 + L1MB7 LINE L1 2983 3060 -3086 * 236 253 25 13 chr20 1099231 1099310 -71054572 + L1MB7 LINE L1 2981 3060 -3086 225 212 30 15 chr20 1099296 1099362 -71054520 + L1MB7 LINE L1 2983 3049 -3097 * 229 260 26 13 chr20 1099359 1099436 -71054446 + L1MB7 LINE L1 2983 3060 -3086 250 253 25 13 chr20 1099546 1099625 -71054257 + L1MB7 LINE L1 2981 3060 -3086 242 253 25 13 chr20 1099672 1099751 -71054131 + L1MB7 LINE L1 2981 3060 -3086 243 247 26 13 chr20 1099863 1099940 -71053942 + L1MB7 LINE L1 2983 3060 -3086 250 253 25 13 chr20 1099987 1100066 -71053816 + L1MB7 LINE L1 2981 3060 -3086 226 194 32 16 chr20 1100115 1100177 -71053705 + L1MB7 LINE L1 2983 3045 -3101 1952 213 92 14 chr20 1100178 1100895 -71052987 + L1MB7 LINE L1 2983 3755 -2391 2785 154 36 11 chr20 1100899 1101410 -71052472 + L1MB7 LINE L1 4256 4753 -1417 1959 115 0 11 chr20 1101410 1101680 -71052202 + AluSq SINE Alu 2 268 -45 2785 154 36 11 chr20 1101680 1101796 -71052086 + L1MB7 LINE L1 4753 5975 -195 2025 154 68 0 chr20 1101796 1102178 -71051704 + L1MD2 LINE L1 5938 6345 -14 2369 215 44 8 chr20 1102190 1102803 -71051079 + L1ME1 LINE L1 5514 6148 -18 808 173 8 8 chr20 1103592 1103725 -71050157 + FLAM_A SINE Alu 1 133 0 2163 122 7 0 chr20 1104793 1105096 -71048786 + AluSx SINE Alu 1 305 -7 460 235 203 45 chr20 1105415 1105726 -71048156 + HAL1 LINE L1 12 371 -2136 857 316 47 26 chr20 1105729 1106195 -71047687 + HAL1 LINE L1 410 885 -1622 560 199 44 82 chr20 1106310 1106545 -71047337 + L1MA10 LINE L1 5949 6332 -2 22 0 0 0 chr20 1106553 1106575 -71047307 + AT_rich Low_complexity Low_complexity 1 22 0 980 253 63 127 chr20 1106575 1106829 -71047053 + HAL1 LINE L1 1024 1293 -1214 337 216 0 14 chr20 1106829 1106903 -71046979 + AluJo SINE Alu 66 138 -164 980 253 63 127 chr20 1106903 1107553 -71046329 + HAL1 LINE L1 1293 1939 -568 3488 37 103 0 chr20 1107680 1108136 -71045746 + L1PA5 LINE L1 5652 6154 0 3205 34 0 0 chr20 1108149 1108532 -71045350 + L1PA5 LINE L1 5770 6152 -2 624 226 167 0 chr20 1108627 1108813 -71045069 + MLT1J LTR MaLR 1 217 -294 576 169 136 32 chr20 1108870 1109024 -71044858 + MLT1J LTR MaLR 342 511 0 536 289 59 33 chr20 1109070 1109343 -71044539 + HAL1 LINE L1 2225 2504 -3 213 39 0 0 chr20 1110318 1110344 -71043538 + (T)n Simple_repeat Simple_repeat 1 26 0 182 323 31 0 chr20 1110875 1110940 -71042942 - L3b LINE CR1 -223 1360 1294 28 61 0 0 chr20 1113704 1113753 -71040129 + AT_rich Low_complexity Low_complexity 1 49 0 212 0 36 0 chr20 1115475 1115503 -71038379 + (TTTA)n Simple_repeat Simple_repeat 4 32 0 1855 174 0 0 chr20 1115857 1116155 -71037727 + AluJb SINE Alu 1 298 -14 1745 187 81 49 chr20 1117319 1117789 -71036093 - MER66B LTR ERV1 -1 485 1 2052 121 0 13 chr20 1119263 1119571 -71034311 + AluSx SINE Alu 1 285 -27 30 0 0 0 chr20 1119771 1119801 -71034081 + AT_rich Low_complexity Low_complexity 1 30 0 273 254 21 113 chr20 1120375 1120517 -71033365 - MIR3 SINE MIR -3 205 77 568 247 6 25 chr20 1120938 1121100 -71032782 - MIR SINE MIR -102 160 2 421 265 45 8 chr20 1121694 1121826 -71032056 - MIR SINE MIR -86 176 40 198 0 0 0 chr20 1122252 1122274 -71031608 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 2196 122 0 0 chr20 1122322 1122617 -71031265 + AluSx SINE Alu 1 295 -17 798 174 192 25 chr20 1122750 1123026 -71030856 + MER5C DNA MER1_type 1 322 -2 1715 145 40 27 chr20 1123347 1123644 -71030238 + AluJo SINE Alu 1 301 -11 257 238 111 63 chr20 1123870 1123996 -71029886 + L2 LINE L2 3169 3300 -13 2185 253 114 39 chr20 1124456 1124548 -71029334 + L2 LINE L2 1899 1983 -1330 2114 163 14 17 chr20 1124548 1124910 -71028972 + MLT1A1 LTR MaLR 1 361 -4 2185 253 114 39 chr20 1124910 1125227 -71028655 + L2 LINE L2 1983 2275 -1038 1621 141 14 186 chr20 1125227 1125668 -71028214 - MLT1A1 LTR MaLR 0 365 1 2185 253 114 39 chr20 1125668 1126557 -71027325 + L2 LINE L2 2275 3313 0 843 318 110 15 chr20 1126939 1127576 -71026306 + L2 LINE L2 2599 3305 -8 268 307 24 24 chr20 1127690 1127817 -71026065 - L2 LINE L2 -8 3305 3179 187 291 244 0 chr20 1128743 1128829 -71025053 + MIR SINE MIR 20 126 -136 1055 68 0 0 chr20 1128850 1128982 -71024900 - AluSg/x SINE Alu -5 307 176 430 250 192 0 chr20 1128986 1129142 -71024740 - MIR SINE MIR -13 249 64 317 279 23 0 chr20 1129208 1129294 -71024588 + MIR SINE MIR 158 245 -17 2158 93 0 3 chr20 1131179 1131469 -71022413 + AluSx SINE Alu 1 289 -23 234 252 0 73 chr20 1131738 1131861 -71022021 + (CGGGG)n Simple_repeat Simple_repeat 5 118 0 344 136 6 62 chr20 1132360 1132537 -71021345 + (CGGGG)n Simple_repeat Simple_repeat 5 171 0 368 224 14 41 chr20 1132562 1132709 -71021173 + (CGGGG)n Simple_repeat Simple_repeat 2 144 0 180 0 0 0 chr20 1132730 1132750 -71021132 + (CGG)n Simple_repeat Simple_repeat 3 22 0 458 285 86 5 chr20 1133031 1133217 -71020665 + MIR SINE MIR 54 254 -8 186 43 0 0 chr20 1133218 1133241 -71020641 + (TTA)n Simple_repeat Simple_repeat 1 23 0 291 303 62 51 chr20 1133469 1133647 -71020235 - MIR SINE MIR -48 214 35 339 257 89 14 chr20 1133697 1133911 -71019971 + L2 LINE L2 2451 2680 -634 1141 117 6 0 chr20 1133931 1134102 -71019780 + MER1B DNA MER1_type 51 222 -75 499 128 0 26 chr20 1134103 1134181 -71019701 + MER1B DNA MER1_type 254 329 0 2173 99 7 0 chr20 1134224 1134508 -71019374 + AluSx SINE Alu 1 286 -26 1401 124 13 13 chr20 1134532 1134758 -71019124 - LTR13 LTR ERVK 0 1007 782 42006 62 9 6 chr20 1134758 1134888 -71018994 - L1PA5 LINE L1 -1 6153 6025 2274 81 0 17 chr20 1134888 1135185 -71018697 - AluSp SINE Alu -21 292 1 42006 62 9 6 chr20 1135185 1136614 -71017268 - L1PA5 LINE L1 -129 6025 4602 2400 68 0 0 chr20 1136614 1136893 -71016989 + AluY SINE Alu 1 279 -32 983 59 46 0 chr20 1136893 1137046 -71016836 + GA-rich Low_complexity Low_complexity 2 161 0 42006 62 9 6 chr20 1137046 1141615 -71012267 - L1PA5 LINE L1 -1551 4603 4 1562 191 41 61 chr20 1141620 1142384 -71011498 - LTR13 LTR ERVK -207 800 1 190 288 63 54 chr20 1142401 1142512 -71011370 + L2 LINE L2 2734 2845 -469 3331 249 66 16 chr20 1142517 1143382 -71010500 + MER69 DNA AcHobo 5 912 -1614 2503 210 121 21 chr20 1143378 1143435 -71010447 + MER69 DNA AcHobo 1707 1757 -769 * 3008 162 19 47 chr20 1143435 1144008 -71009874 + MER41D LTR ERV1 1 557 0 2503 210 121 21 chr20 1144008 1144694 -71009188 + MER69 DNA AcHobo 1757 2524 -2 418 303 8 8 chr20 1144828 1144947 -71008935 + L2 LINE L2 3191 3309 -4 190 265 174 15 chr20 1145026 1145158 -71008724 - MIR SINE MIR -78 184 32 1128 191 131 72 chr20 1145623 1145978 -71007904 + MLT1D LTR MaLR 34 504 -106 338 355 44 15 chr20 1146295 1146498 -71007384 + MIR SINE MIR 2 210 -52 952 241 31 0 chr20 1146568 1146796 -71007086 - MIR SINE MIR -26 236 2 2307 89 3 0 chr20 1146817 1147110 -71006772 + AluSp SINE Alu 1 294 -19 3299 93 2 23 chr20 1147116 1147599 -71006283 + L1PA8 LINE L1 5696 6168 -4 801 264 81 4 chr20 1147619 1147854 -71006028 - MIR SINE MIR 0 262 10 192 97 0 0 chr20 1147855 1147886 -71005996 + (ATG)n Simple_repeat Simple_repeat 3 33 0 243 266 0 16 chr20 1147886 1147950 -71005932 + GA-rich Low_complexity Low_complexity 3 65 0 357 223 83 68 chr20 1148128 1148417 -71005465 + MLT1F1 LTR MaLR 185 554 -13 2080 207 154 24 chr20 1149269 1149930 -71003952 - LTR50 LTR ERVL 0 795 49 336 256 107 135 chr20 1150339 1150807 -71003075 - MLT1K LTR MaLR -2 586 132 286 318 9 0 chr20 1151100 1151207 -71002675 - MIR SINE MIR -71 137 30 210 329 40 0 chr20 1151656 1151732 -71002150 + MIR SINE MIR 116 194 -68 2509 173 17 4 chr20 1151743 1152216 -71001666 + Charlie1b DNA MER1_type 45 523 0 1573 149 38 8 chr20 1152291 1152574 -71001308 - AluJo SINE Alu 0 312 36 2338 98 0 7 chr20 1152982 1153288 -71000594 + AluSx SINE Alu 1 304 -8 264 239 14 14 chr20 1154203 1154274 -70999608 + LTR16C LTR ERVL 421 491 0 466 260 27 7 chr20 1154325 1154471 -70999411 - MIR SINE MIR -33 229 81 384 251 64 98 chr20 1155305 1155540 -70998342 + MLT1L LTR MaLR 189 415 -200 4194 90 15 0 chr20 1155664 1156210 -70997672 - MER41A LTR ERV1 0 554 1 484 261 39 20 chr20 1156236 1156389 -70997493 - L2 LINE L2 0 3313 3158 26 23 0 23 chr20 1156429 1156449 -70997433 + AT_rich Low_complexity Low_complexity 1 20 -23 1897 88 0 4 chr20 1156449 1156689 -70997193 + AluSq SINE Alu 1 239 -74 26 23 0 23 chr20 1156689 1156712 -70997170 + AT_rich Low_complexity Low_complexity 20 43 0 415 269 97 7 chr20 1156781 1156926 -70996956 + L1MEd LINE L1 597 754 -5365 1678 148 0 19 chr20 1156980 1157243 -70996639 + AluJo SINE Alu 1 258 -54 2330 122 0 0 chr20 1157315 1157618 -70996264 - AluSq SINE Alu -10 303 1 2017 191 13 64 chr20 1157831 1158301 -70995581 + MER41B LTR ERV1 157 602 -33 314 173 49 12 chr20 1158590 1158671 -70995211 + MIR SINE MIR 36 119 -89 604 247 66 52 chr20 1159143 1159434 -70994448 - MLT1H LTR MaLR -33 376 64 220 283 43 0 chr20 1159709 1159801 -70994081 - MIR SINE MIR -3 259 164 495 278 63 0 chr20 1159801 1159927 -70993955 + MER119 DNA MER1_type 1 134 -449 544 191 63 32 chr20 1159927 1160053 -70993829 + MER119 DNA MER1_type 454 583 0 326 252 36 18 chr20 1160102 1160213 -70993669 - MIR SINE MIR -101 161 49 181 128 43 0 chr20 1160847 1160894 -70992988 + (TA)n Simple_repeat Simple_repeat 2 50 0 42 47 0 24 chr20 1160910 1160953 -70992929 + AT_rich Low_complexity Low_complexity 1 43 -40 1853 153 43 0 chr20 1160953 1161235 -70992647 + AluSx SINE Alu 1 294 -18 42 47 0 24 chr20 1161235 1161276 -70992606 + AT_rich Low_complexity Low_complexity 43 83 0 1101 227 196 44 chr20 1161299 1161708 -70992174 + MLT1J LTR MaLR 1 471 -40 899 268 197 29 chr20 1162432 1162843 -70991039 + LTR16C LTR ERVL 3 482 -9 1191 220 91 49 chr20 1162856 1163143 -70990739 + MLT1A1 LTR MaLR 1 307 -58 1671 194 17 3 chr20 1163143 1163442 -70990440 - AluJo SINE Alu -9 303 1 1191 220 91 49 chr20 1163442 1163504 -70990378 + MLT1A1 LTR MaLR 307 365 0 634 238 94 30 chr20 1164750 1164985 -70988897 + MIR SINE MIR 8 257 -5 2376 107 0 0 chr20 1165265 1165574 -70988308 - AluSq SINE Alu -4 309 1 1561 259 63 11 chr20 1165596 1166059 -70987823 - MLT1J LTR MaLR -18 493 7 2475 60 0 7 chr20 1166149 1166448 -70987434 - AluY SINE Alu -14 297 1 893 245 176 31 chr20 1166568 1167072 -70986810 + MLT1G LTR MaLR 13 590 0 430 111 0 0 chr20 1167783 1167846 -70986036 - L1MC3 LINE L1 -21 7764 7702 269 105 0 0 chr20 1167848 1167886 -70985996 - MSTB LTR MaLR 0 432 395 1671 171 11 7 chr20 1167887 1168162 -70985720 + AluJo SINE Alu 1 276 -36 1164 111 0 0 chr20 1168172 1168245 -70985637 + (GAA)n Simple_repeat Simple_repeat 1 253 0 1164 111 0 0 chr20 1168245 1168425 -70985457 + (GAA)n Simple_repeat Simple_repeat 1 180 0 2186 159 20 30 chr20 1168491 1168894 -70984988 - MSTB LTR MaLR -27 399 1 4008 181 55 49 chr20 1168894 1169714 -70984168 - L1MC3 LINE L1 -81 7909 7095 617 57 52 38 chr20 1169714 1169930 -70983952 + (TG)n Simple_repeat Simple_repeat 1 219 0 4008 181 55 49 chr20 1169930 1170206 -70983676 - L1MC3 LINE L1 -895 7095 6822 252 0 0 0 chr20 1170206 1170234 -70983648 + (TG)n Simple_repeat Simple_repeat 2 29 0 4008 181 55 49 chr20 1170234 1170356 -70983526 - L1MC3 LINE L1 -1168 6822 6496 600 346 42 34 chr20 1170467 1170960 -70982922 + L2 LINE L2 2714 3205 -67 1222 257 81 28 chr20 1170984 1171381 -70982501 - L2 LINE L2 -5 3308 2891 313 287 166 0 chr20 1171377 1171534 -70982348 - MIR SINE MIR -49 213 31 * 286 319 0 0 chr20 1171981 1172053 -70981829 - MER96 DNA MER1_type? -103 72 1 214 284 37 102 chr20 1172125 1172340 -70981542 - L2 LINE L2 -85 3187 2987 207 135 39 58 chr20 1172556 1172608 -70981274 + G-rich Low_complexity Low_complexity 3 53 0 21 36 0 0 chr20 1172668 1172696 -70981186 + GC_rich Low_complexity Low_complexity 1 28 0 247 218 0 39 chr20 1172896 1172974 -70980908 + C-rich Low_complexity Low_complexity 5 79 0 23 0 0 0 chr20 1173187 1173210 -70980672 + GC_rich Low_complexity Low_complexity 1 23 0 363 96 0 0 chr20 1173733 1173785 -70980097 + (TG)n Simple_repeat Simple_repeat 1 52 0 185 0 0 39 chr20 1175005 1175031 -70978851 + (TTCA)n Simple_repeat Simple_repeat 4 28 0 372 22 0 0 chr20 1175054 1175099 -70978783 + (CA)n Simple_repeat Simple_repeat 2 46 0 563 254 75 79 chr20 1175336 1175615 -70978267 - MER102b DNA MER1_type -51 290 13 577 236 93 25 chr20 1176243 1176404 -70977478 - MIR SINE MIR -40 222 51 408 301 68 17 chr20 1176450 1176626 -70977256 - MIR SINE MIR -23 239 55 331 213 27 0 chr20 1178075 1178150 -70975732 + MIR3 SINE MIR 109 185 -23 680 220 38 25 chr20 1180004 1180163 -70973719 + MIR SINE MIR 26 186 -76 1483 291 76 17 chr20 1180215 1180566 -70973316 + L2 LINE L2 2396 2725 -588 445 277 136 0 chr20 1180566 1180721 -70973161 + MER69A DNA AcHobo 1 176 -1 1483 291 76 17 chr20 1180721 1181235 -70972647 + L2 LINE L2 2725 3313 0 206 349 0 0 chr20 1181799 1181862 -70972020 + (CA)n Simple_repeat Simple_repeat 2 64 0 274 256 73 0 chr20 1182148 1182230 -70971652 + MIR SINE MIR 30 117 -91 202 225 303 0 chr20 1182502 1182591 -70971291 + L3 LINE CR1 1347 1462 -115 617 254 57 17 chr20 1183025 1183202 -70970680 + MIR SINE MIR 76 259 -3 230 227 0 15 chr20 1183563 1183629 -70970253 + G-rich Low_complexity Low_complexity 5 69 0 336 254 183 24 chr20 1183675 1183801 -70970081 + MIR SINE MIR 116 261 -1 520 251 133 5 chr20 1184377 1184572 -70969310 - MER102b DNA MER1_type 0 341 122 273 138 292 0 chr20 1184797 1184862 -70969020 - L2 LINE L2 0 3313 3230 201 39 0 0 chr20 1185328 1185354 -70968528 + (CAAAC)n Simple_repeat Simple_repeat 1 26 0 671 202 0 0 chr20 1185391 1185505 -70968377 + FLAM_A SINE Alu 1 114 -19 661 145 34 17 chr20 1185506 1185623 -70968259 + AluJo/FRAM SINE Alu 191 309 -3 758 257 16 5 chr20 1185952 1186139 -70967743 - MIR SINE MIR -21 241 53 234 192 270 11 chr20 1186328 1186425 -70967457 - MIR SINE MIR -9 199 85 262 232 103 3 chr20 1186857 1186957 -70966925 + MIR3 SINE MIR 47 161 -47 182 94 0 31 chr20 1187389 1187421 -70966461 + MIR SINE MIR 43 73 -189 245 301 97 29 chr20 1187794 1187897 -70965985 + MIR SINE MIR 81 190 -72 184 259 74 19 chr20 1188096 1188150 -70965732 + L2 LINE L2 1183 1239 -2075 * 531 169 208 8 chr20 1188120 1188250 -70965632 - MER5A DNA MER1_type -6 183 28 207 268 141 78 chr20 1188291 1188433 -70965449 - MER5A DNA MER1_type -5 184 34 3525 159 70 32 chr20 1190317 1191057 -70962825 + L1MB7 LINE L1 5417 6184 0 201 342 34 43 chr20 1191995 1192112 -70961770 - MIR3 SINE MIR -78 130 15 334 336 60 0 chr20 1192397 1192546 -70961336 - MIR3 SINE MIR -9 199 42 428 257 142 0 chr20 1193479 1193592 -70960290 + MIR SINE MIR 18 146 -116 180 243 0 0 chr20 1193840 1193877 -70960005 + L2 LINE L2 2562 2598 -716 33 25 0 0 chr20 1195471 1195511 -70958371 + AT_rich Low_complexity Low_complexity 1 40 0 588 199 156 7 chr20 1195718 1195859 -70958023 - MER106A DNA MER1_type -74 162 1 24 32 0 0 chr20 1197933 1197964 -70955918 + AT_rich Low_complexity Low_complexity 1 31 0 280 145 24 145 chr20 1198042 1198125 -70955757 + L1ME LINE L1 5805 5877 -244 991 201 72 5 chr20 1198928 1199137 -70954745 + AluJo SINE Alu 1 223 -89 24 0 0 0 chr20 1199177 1199201 -70954681 + AT_rich Low_complexity Low_complexity 1 24 0 1332 106 0 0 chr20 1199312 1199492 -70954390 - AluSg/x SINE Alu -8 304 125 202 211 0 0 chr20 1200114 1200152 -70953730 - L2 LINE L2 -19 3253 3216 6934 47 12 11 chr20 1200196 1201051 -70952831 + HERVL-A1 LTR ERVL 4798 5653 -1 3031 78 34 25 chr20 1201052 1201490 -70952392 + MLT2A1 LTR ERVL 1 442 -2 2903 240 102 26 chr20 1201491 1202693 -70951189 - L1ME LINE L1 -4393 1687 396 447 266 175 7 chr20 1203638 1203781 -70950101 - MER5A DNA MER1_type -1 188 22 413 232 86 78 chr20 1204490 1204721 -70949161 + MLT1E3-int LTR MaLR 1107 1705 -30 631 255 155 33 chr20 1204734 1205173 -70948709 + MLT1E3 LTR MaLR 1 479 -26 514 306 60 28 chr20 1205298 1205546 -70948336 + L1ME LINE L1 5490 5745 -376 695 294 81 20 chr20 1205547 1205843 -70948039 + L2 LINE L2 2445 2758 -556 511 306 48 34 chr20 1206057 1206263 -70947619 + MIR SINE MIR 50 258 -4 560 307 78 10 chr20 1206827 1207035 -70946847 + MIR SINE MIR 41 261 -1 435 307 108 11 chr20 1207044 1207220 -70946662 + MIR SINE MIR 66 258 -4 1249 246 55 37 chr20 1207365 1207853 -70946029 + L1M4 LINE L1 4884 5380 -766 1269 217 84 10 chr20 1207896 1208195 -70945687 + Charlie1a DNA MER1_type 62 382 -1073 1094 155 0 0 chr20 1208195 1208363 -70945519 - AluJb SINE Alu -14 298 131 1561 184 41 0 chr20 1208366 1208637 -70945245 - AluJb SINE Alu -30 282 1 1162 190 55 51 chr20 1208639 1208913 -70944969 + Charlie1a DNA MER1_type 372 646 -809 3224 143 67 24 chr20 1208916 1209586 -70944296 + Charlie1a DNA MER1_type 749 1447 -8 327 340 37 37 chr20 1210953 1211141 -70942741 + MIR SINE MIR 13 200 -62 393 22 0 0 chr20 1211209 1211255 -70942627 + (ATG)n Simple_repeat Simple_repeat 2 47 0 367 308 109 0 chr20 1211555 1211711 -70942171 - MIR SINE MIR -72 190 18 242 341 64 58 chr20 1212839 1213012 -70940870 + L2 LINE L2 2925 3098 -174 260 193 44 114 chr20 1213161 1213207 -70940675 - L1MD2 LINE L1 -3 6356 6308 1762 148 39 0 chr20 1213207 1213491 -70940391 + AluSq SINE Alu 3 297 -16 260 193 44 114 chr20 1213491 1213558 -70940324 - L1MD2 LINE L1 -51 6308 6251 4082 204 54 33 chr20 1213561 1214276 -70939606 - L1MD1 LINE L1 -183 6059 5361 2000 111 10 13 chr20 1214276 1214582 -70939300 - AluSx SINE Alu -7 305 1 4082 204 54 33 chr20 1214582 1215462 -70938420 - L1MD1 LINE L1 -881 5361 4501 5755 30 0 0 chr20 1215462 1216121 -70937761 + L1PA4 LINE L1 5497 6155 0 4082 204 54 33 chr20 1216121 1216145 -70937737 - L1MD1 LINE L1 -1741 4501 4479 180 0 0 0 chr20 1216145 1216165 -70937717 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 2074 73 3 31 chr20 1216166 1216454 -70937428 - AluSx SINE Alu -32 280 1 4082 204 54 33 chr20 1216454 1216800 -70937082 - L1MD1 LINE L1 -1762 4480 4050 1972 167 75 29 chr20 1217039 1217493 -70936389 - L1MB8 LINE L1 -1 6177 5703 5144 211 42 42 chr20 1217496 1218624 -70935258 - L1MB8 LINE L1 -740 5434 4307 1741 73 0 0 chr20 1218624 1218843 -70935039 - AluY SINE Alu -8 303 85 5144 211 42 42 chr20 1218843 1219180 -70934702 - L1MB8 LINE L1 -1867 4307 3972 1939 128 16 19 chr20 1219184 1219497 -70934385 - AluSx SINE Alu 0 312 1 1227 186 0 5 chr20 1219542 1219763 -70934119 - AluJb SINE Alu -6 306 87 340 259 47 0 chr20 1219766 1219851 -70934031 - L1MB8 LINE L1 -2185 3961 3873 958 118 31 12 chr20 1219854 1220015 -70933867 - AluSg/x SINE Alu -12 300 137 1370 215 43 7 chr20 1220015 1220317 -70933565 - L1MB8 LINE L1 -2264 3882 3570 1145 235 65 65 chr20 1220332 1220916 -70932966 - L1MC5 LINE L1 -47 7914 7331 307 259 3 3 chr20 1221048 1221152 -70932730 - L1MC5 LINE L1 -644 7228 7061 2057 253 71 25 chr20 1221194 1221940 -70931942 + MER20B DNA MER1_type 4 783 -1 291 306 118 35 chr20 1222045 1222215 -70931667 + MIR3 SINE MIR 18 201 -7 6168 224 69 45 chr20 1223892 1224820 -70929062 + L1MC4a LINE L1 2716 3620 -2526 183 80 0 0 chr20 1224820 1224845 -70929037 + (TA)n Simple_repeat Simple_repeat 1 25 0 6168 224 69 45 chr20 1224845 1225816 -70928066 + L1MC4a LINE L1 3620 4676 -1470 2107 110 0 31 chr20 1225816 1226135 -70927747 + AluSc SINE Alu 1 309 0 6168 224 69 45 chr20 1226135 1226414 -70927468 + L1MC4a LINE L1 4676 4947 -1199 330 217 122 26 chr20 1226903 1227018 -70926864 - MIR SINE MIR -14 248 123 905 149 19 88 chr20 1227538 1227753 -70926129 + AluJo SINE Alu 92 291 -21 446 303 141 43 chr20 1227782 1228044 -70925838 - L2 LINE L2 -209 3063 2739 4074 130 50 14 chr20 1228044 1228758 -70925124 - L1MB3 LINE L1 -3 6180 5441 446 303 141 43 chr20 1228758 1228854 -70925028 - L2 LINE L2 -533 2739 2654 1240 130 236 12 chr20 1229106 1229212 -70924670 + AluSx SINE Alu 1 82 -230 2325 64 6 19 chr20 1229212 1229524 -70924358 + AluY SINE Alu 1 308 -3 1240 130 236 12 chr20 1229524 1229671 -70924211 + AluSx SINE Alu 82 311 -1 1064 278 79 31 chr20 1229682 1230139 -70923743 + L1MC4a LINE L1 6175 6653 -1155 * 1886 176 73 38 chr20 1230120 1230546 -70923336 + L1MC1 LINE L1 5891 6331 -2 588 280 138 53 chr20 1231110 1231493 -70922389 + LTR67 LTR ERVL 45 478 -79 1871 127 0 14 chr20 1231493 1231796 -70922086 - AluSx SINE Alu 0 301 3 588 280 138 53 chr20 1231796 1231883 -70921999 + LTR67 LTR ERVL 478 556 -1 238 316 62 28 chr20 1231886 1232063 -70921819 + L1MC/D LINE L1 5737 5919 -1889 369 312 77 72 chr20 1232093 1232455 -70921427 - L2 LINE L2 -74 3239 2876 325 326 136 13 chr20 1232481 1232717 -70921165 - L1ME LINE L1 -325 5796 5532 553 260 107 17 chr20 1232922 1233099 -70920783 - MIR3 SINE MIR -2 206 14 833 270 167 16 chr20 1233577 1234007 -70919875 - L1ME3A LINE L1 -230 5940 5446 257 237 79 0 chr20 1234231 1234307 -70919575 + L1MC4a LINE L1 5150 5231 -915 375 298 203 27 chr20 1234387 1234826 -70919056 + L1MC4a LINE L1 5317 5832 -1976 1897 127 10 16 chr20 1235791 1236105 -70917777 + AluSx SINE Alu 1 312 0 299 257 37 37 chr20 1236111 1236220 -70917662 - MIR SINE MIR -73 135 27 22 35 0 0 chr20 1237243 1237272 -70916610 + AT_rich Low_complexity Low_complexity 1 29 0 771 224 42 63 chr20 1240057 1240294 -70913588 - MIR SINE MIR 0 262 31 564 265 113 11 chr20 1240296 1240481 -70913401 - MIR SINE MIR -10 252 49 673 274 140 31 chr20 1240550 1240747 -70913135 + L2 LINE L2 2503 2677 -637 2211 102 0 19 chr20 1240747 1241062 -70912820 + AluSx SINE Alu 1 309 -3 673 274 140 31 chr20 1241062 1241215 -70912667 + L2 LINE L2 2677 2891 -423 831 254 5 0 chr20 1241239 1241424 -70912458 + L2 LINE L2 2462 2647 -667 758 256 98 61 chr20 1241429 1241808 -70912074 + L2 LINE L2 2921 3313 0 255 368 52 15 chr20 1241917 1242053 -70911829 - MER5A DNA MER1_type -48 141 1 193 312 75 32 chr20 1242245 1242338 -70911544 - L2 LINE L2 -28 3244 3148 2296 75 7 0 chr20 1242360 1242653 -70911229 + AluSg SINE Alu 1 295 -15 223 282 118 0 chr20 1242668 1242753 -70911129 - L2 LINE L2 -302 2970 2876 725 247 11 11 chr20 1242875 1243053 -70910829 - MER97c DNA MER1_type? -912 178 1 1021 218 37 25 chr20 1243963 1244206 -70909676 - LTR16C LTR ERVL 0 491 246 2486 45 3 6 chr20 1244400 1244711 -70909171 + AluY SINE Alu 1 310 -1 220 262 0 82 chr20 1244784 1244845 -70909037 + L2 LINE L2 3137 3192 -80 432 0 0 0 chr20 1244897 1244945 -70908937 + (TG)n Simple_repeat Simple_repeat 2 49 0 209 260 65 39 chr20 1245255 1245332 -70908550 + L2 LINE L2 2977 3055 -217 253 139 0 0 chr20 1245400 1245436 -70908446 - MER97c DNA MER1_type? -2 1088 1053 1710 82 26 4 chr20 1245468 1245699 -70908183 + AluY SINE Alu 1 236 -75 1824 203 7 59 chr20 1295699 1296138 -70857744 - MER41B LTR ERV1 -63 572 157 1303 231 0 0 chr20 1296355 1296654 -70857228 + AluSq SINE Alu 5 303 -10 1568 148 0 19 chr20 1296726 1296989 -70856893 - AluJo SINE Alu -54 258 1 417 269 97 7 chr20 1297043 1297188 -70856694 - L1MEd LINE L1 -5365 754 597 26 23 0 23 chr20 1297257 1297280 -70856602 + AT_rich Low_complexity Low_complexity 1 24 -19 1803 88 0 4 chr20 1297280 1297520 -70856362 - AluSq SINE Alu -74 239 1 26 23 0 23 chr20 1297520 1297540 -70856342 + AT_rich Low_complexity Low_complexity 24 43 0 551 261 39 20 chr20 1297580 1297733 -70856149 + L2 LINE L2 3158 3313 0 4194 90 15 0 chr20 1297759 1298305 -70855577 + MER41A LTR ERV1 1 554 0 384 251 64 98 chr20 1298429 1298664 -70855218 - MLT1L LTR MaLR -200 415 189 532 260 27 7 chr20 1299498 1299644 -70854238 + MIR SINE MIR 81 229 -33 266 239 14 14 chr20 1299695 1299766 -70854116 - LTR16C LTR ERVL 0 491 421 2190 101 0 7 chr20 1300681 1300987 -70852895 - AluSx SINE Alu -8 304 1 1458 153 38 8 chr20 1301395 1301678 -70852204 + AluJo SINE Alu 36 312 0 2483 173 17 4 chr20 1301753 1302226 -70851656 - Charlie1b DNA MER1_type 0 523 45 244 329 40 0 chr20 1302237 1302313 -70851569 - MIR SINE MIR -68 194 116 320 318 9 0 chr20 1302762 1302869 -70851013 + MIR SINE MIR 30 137 -71 358 259 107 135 chr20 1303162 1303630 -70850252 + MLT1K LTR MaLR 132 586 -2 2111 201 157 27 chr20 1304039 1304700 -70849182 + LTR50 LTR ERVL 49 795 0 364 223 83 68 chr20 1305552 1305841 -70848041 - MLT1G3 LTR MaLR -13 554 185 194 217 0 17 chr20 1306025 1306085 -70847797 + CT-rich Low_complexity Low_complexity 1 59 0 192 97 0 0 chr20 1306083 1306114 -70847768 + (CAT)n Simple_repeat Simple_repeat 3 33 0 * 900 264 81 4 chr20 1306115 1306350 -70847532 + MIR SINE MIR 10 262 0 3273 95 2 23 chr20 1306370 1306853 -70847029 - L1PA8 LINE L1 -4 6168 5696 2180 89 3 0 chr20 1306859 1307152 -70846730 - AluSp SINE Alu -19 294 1 1054 241 31 0 chr20 1307173 1307401 -70846481 + MIR SINE MIR 2 236 -26 417 355 44 15 chr20 1307471 1307674 -70846208 - MIR SINE MIR -52 210 2 1132 191 131 72 chr20 1307991 1308346 -70845536 - MLT1D LTR MaLR -106 399 34 193 304 0 18 chr20 1308507 1308563 -70845319 - MIR SINE MIR -100 162 108 246 265 174 15 chr20 1308811 1308943 -70844939 + MIR SINE MIR 32 184 -78 462 303 8 8 chr20 1309022 1309141 -70844741 - L2 LINE L2 -4 3309 3191 184 222 69 56 chr20 1309159 1309231 -70844651 - L2 LINE L2 0 3313 3241 2392 212 118 20 chr20 1309275 1309962 -70843920 - MER69 DNA AcHobo -2 2524 1757 2996 164 19 47 chr20 1309962 1310535 -70843347 - MER41D LTR ERV1 0 557 1 2392 212 118 20 chr20 1310535 1310592 -70843290 - MER69 DNA AcHobo -769 1757 1707 * 3354 247 70 16 chr20 1310588 1311450 -70842432 - MER69 DNA AcHobo -1614 912 5 228 288 63 54 chr20 1311455 1311566 -70842316 - L2 LINE L2 -469 2845 2734 1555 195 41 61 chr20 1311583 1312347 -70841535 + LTR13 LTR ERVK 1 800 -207 42011 61 9 6 chr20 1312352 1316921 -70836961 + L1PA4 LINE L1 4 4559 -1596 1056 58 32 0 chr20 1316921 1317076 -70836806 + (TTTC)n Simple_repeat Simple_repeat 2 161 0 2283 65 0 0 chr20 1317076 1317355 -70836527 - AluY SINE Alu -32 279 1 42011 61 9 6 chr20 1317355 1318789 -70835093 + L1PA4 LINE L1 4559 6028 -127 2146 81 0 17 chr20 1318789 1319086 -70834796 + AluSp SINE Alu 1 292 -21 42011 61 9 6 chr20 1319086 1319215 -70834667 + L1PA4 LINE L1 6028 6155 0 1411 124 13 13 chr20 1319216 1319442 -70834440 + LTR13 LTR ERVK 782 1007 0 2050 99 7 0 chr20 1319466 1319750 -70834132 - AluSx SINE Alu -26 286 1 505 128 0 26 chr20 1319793 1319871 -70834011 - MER1B DNA MER1_type 0 329 254 1141 131 6 0 chr20 1319872 1320048 -70833834 - MER1B DNA MER1_type -75 222 46 409 252 89 14 chr20 1320063 1320277 -70833605 - L2 LINE L2 -634 2680 2451 360 303 62 51 chr20 1320327 1320505 -70833377 + MIR SINE MIR 35 214 -48 186 43 0 0 chr20 1320733 1320756 -70833126 + (TAA)n Simple_repeat Simple_repeat 1 23 0 548 280 86 5 chr20 1320757 1320943 -70832939 - MIR SINE MIR -8 254 54 180 0 0 0 chr20 1321224 1321244 -70832638 + (CCG)n Simple_repeat Simple_repeat 3 22 0 461 157 5 76 chr20 1321304 1321692 -70832190 + (CCCCG)n Simple_repeat Simple_repeat 1 360 0 234 252 0 73 chr20 1322205 1322328 -70831554 + (CCCCG)n Simple_repeat Simple_repeat 5 118 0 2107 90 0 3 chr20 1322597 1322887 -70830995 - AluSx SINE Alu -23 289 1 338 290 40 0 chr20 1324772 1324872 -70829010 - MIR SINE MIR -17 245 142 499 250 192 0 chr20 1324924 1325080 -70828802 + MIR SINE MIR 64 249 -13 1038 68 0 0 chr20 1325084 1325216 -70828666 + AluSg/x SINE Alu 176 307 -5 217 291 244 0 chr20 1325237 1325323 -70828559 - MIR SINE MIR -136 126 20 315 307 24 24 chr20 1326249 1326376 -70827506 + L2 LINE L2 3179 3305 -8 994 320 109 15 chr20 1326490 1327127 -70826755 - L2 LINE L2 -8 3305 2599 21 71 0 0 chr20 1327323 1327365 -70826517 + AT_rich Low_complexity Low_complexity 1 42 0 2537 253 114 39 chr20 1327509 1328398 -70825484 - L2 LINE L2 0 3313 2493 1568 136 14 188 chr20 1328398 1328840 -70825042 + MLT1A1 LTR MaLR 1 365 0 2537 253 114 39 chr20 1328840 1329157 -70824725 - L2 LINE L2 -820 2493 2201 2075 160 14 17 chr20 1329157 1329519 -70824363 - MLT1A1 LTR MaLR -4 361 1 2537 253 114 39 chr20 1329519 1329611 -70824271 - L2 LINE L2 -1112 2201 1899 296 238 111 63 chr20 1330071 1330197 -70823685 - L2 LINE L2 -13 3300 3169 1728 145 40 27 chr20 1330423 1330720 -70823162 - AluJo SINE Alu -11 301 1 868 181 192 25 chr20 1331041 1331317 -70822565 - MER5C DNA MER1_type -2 322 1 2162 125 0 0 chr20 1331450 1331745 -70822137 - AluSx SINE Alu -17 295 1 198 0 0 0 chr20 1331793 1331815 -70822067 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 193 288 123 34 chr20 1331888 1332034 -70821848 + L2 LINE L2 2606 2764 -550 449 291 37 10 chr20 1332212 1332373 -70821509 + MIR SINE MIR 17 176 -62 625 247 6 25 chr20 1332967 1333129 -70820753 + MIR SINE MIR 2 160 -102 324 255 27 107 chr20 1333544 1333693 -70820189 + MIR3 SINE MIR 69 205 -3 30 0 0 0 chr20 1334267 1334297 -70819585 + AT_rich Low_complexity Low_complexity 1 30 0 2120 134 0 10 chr20 1334491 1334805 -70819077 - AluSx SINE Alu -1 311 1 1745 187 81 49 chr20 1336279 1336749 -70817133 + MER66B LTR ERV1 1 485 -1 1855 174 0 0 chr20 1337913 1338211 -70815671 - AluJb SINE Alu -14 298 1 212 0 36 0 chr20 1338566 1338594 -70815288 + (TAAA)n Simple_repeat Simple_repeat 4 32 0 28 61 0 0 chr20 1340316 1340365 -70813517 + AT_rich Low_complexity Low_complexity 1 49 0 182 323 31 0 chr20 1343129 1343194 -70810688 + L3b LINE CR1 1294 1360 -223 249 33 0 0 chr20 1343725 1343755 -70810127 + (A)n Simple_repeat Simple_repeat 1 30 0 536 289 59 33 chr20 1344730 1345003 -70808879 - HAL1 LINE L1 -3 2504 2225 576 169 136 32 chr20 1345049 1345203 -70808679 - MLT1J LTR MaLR 0 511 342 624 226 167 0 chr20 1345260 1345446 -70808436 - MLT1J LTR MaLR -294 217 1 3205 34 0 0 chr20 1345541 1345924 -70807958 - L1PA5 LINE L1 -2 6152 5770 3481 37 103 0 chr20 1345937 1346393 -70807489 - L1PA5 LINE L1 0 6154 5652 990 252 62 127 chr20 1346520 1347171 -70806711 - HAL1 LINE L1 -568 1939 1293 337 216 0 14 chr20 1347171 1347245 -70806637 - AluJo SINE Alu -164 138 66 990 252 62 127 chr20 1347245 1347499 -70806383 - HAL1 LINE L1 -1214 1293 1024 22 0 0 0 chr20 1347499 1347521 -70806361 + AT_rich Low_complexity Low_complexity 1 22 0 560 213 24 18 chr20 1347529 1347542 -70806340 - L1MA10 LINE L1 -2 6332 6320 557 198 45 86 chr20 1347542 1347764 -70806118 - L1ME1 LINE L1 -5 6161 5949 857 316 47 26 chr20 1347879 1348345 -70805537 - HAL1 LINE L1 -1622 885 410 460 235 203 45 chr20 1348348 1348659 -70805223 - HAL1 LINE L1 -2136 371 12 2163 122 7 0 chr20 1348978 1349281 -70804601 - AluSx SINE Alu -7 305 1 808 173 8 8 chr20 1350349 1350482 -70803400 - FLAM_A SINE Alu 0 133 1 2323 220 44 8 chr20 1351271 1351884 -70801998 - L1ME1 LINE L1 -18 6542 5908 2025 154 68 0 chr20 1351896 1352278 -70801604 - L1MD2 LINE L1 -14 6345 5938 2785 151 37 11 chr20 1352278 1352394 -70801488 - L1MB7 LINE L1 -195 6369 6257 1959 115 0 11 chr20 1352394 1352664 -70801218 - AluSq SINE Alu -45 268 2 2785 151 37 11 chr20 1352664 1353175 -70800707 - L1MB7 LINE L1 -307 6257 4650 1952 213 92 14 chr20 1353179 1353896 -70799986 - L1MB7 LINE L1 -2391 4149 3377 226 194 32 16 chr20 1353897 1353959 -70799923 - L1MB7 LINE L1 -3101 3439 3377 250 253 25 13 chr20 1354008 1354087 -70799795 - L1MB7 LINE L1 -3086 3454 3375 243 247 26 13 chr20 1354134 1354211 -70799671 - L1MB7 LINE L1 -3086 3454 3377 229 260 26 13 chr20 1354386 1354463 -70799419 - L1MB7 LINE L1 -3086 3454 3377 238 234 26 13 chr20 1354583 1354660 -70799222 - L1MB7 LINE L1 -3097 3443 3366 250 253 25 13 chr20 1354761 1354840 -70799042 - L1MB7 LINE L1 -3086 3454 3375 229 260 26 13 chr20 1354824 1354901 -70798981 - L1MB7 LINE L1 -3086 3454 3377 * 238 234 26 13 chr20 1355020 1355097 -70798785 - L1MB7 LINE L1 -3097 3443 3366 243 247 26 13 chr20 1355198 1355275 -70798607 - L1MB7 LINE L1 -3086 3454 3377 243 247 26 13 chr20 1355261 1355338 -70798544 - L1MB7 LINE L1 -3086 3454 3377 * 244 247 26 13 chr20 1355324 1355401 -70798481 - L1MB7 LINE L1 -3086 3454 3377 227 212 30 15 chr20 1355461 1355527 -70798355 - L1MB7 LINE L1 -3097 3443 3377 227 212 30 15 chr20 1355524 1355590 -70798292 - L1MB7 LINE L1 -3097 3443 3377 * 234 221 29 15 chr20 1355587 1355655 -70798227 - L1MB7 LINE L1 -3097 3443 3375 244 217 29 14 chr20 1355960 1356029 -70797853 - L1MB7 LINE L1 -3096 3444 3375 225 260 26 13 chr20 1356013 1356090 -70797792 - L1MB7 LINE L1 -3086 3454 3377 * 887 232 67 20 chr20 1356087 1356384 -70797498 - L1MB7 LINE L1 -3097 3443 3133 2277 137 15 25 chr20 1356384 1356785 -70797097 - Tigger2a DNA MER2_type -36 398 2 2092 214 55 54 chr20 1356788 1357468 -70796414 - L1MB7 LINE L1 -3467 3073 2395 1765 170 6 46 chr20 1357468 1357791 -70796091 - AluSx SINE Alu -2 310 1 2092 214 55 54 chr20 1357791 1358412 -70795470 - L1MB7 LINE L1 -4145 2395 1773 1947 150 7 13 chr20 1358412 1358712 -70795170 - AluJo SINE Alu -14 298 1 2092 214 55 54 chr20 1358712 1358846 -70795036 - L1MB7 LINE L1 -4767 1773 1641 286 293 20 0 chr20 1359333 1359432 -70794450 - L1ME LINE L1 -5923 147 47 765 137 65 0 chr20 1359819 1359943 -70793939 + FLAM_C SINE Alu 1 132 -11 1616 230 180 5 chr20 1360674 1361190 -70792692 - L2 LINE L2 -2 3311 2711 300 356 34 25 chr20 1361248 1361366 -70792516 - MIR SINE MIR -72 136 18 383 205 0 0 chr20 1361655 1361733 -70792149 - MIR3 SINE MIR -50 158 81 261 301 75 68 chr20 1363175 1363321 -70790561 + MIR3 SINE MIR 17 163 -45 465 215 83 56 chr20 1363527 1363671 -70790211 + MIR SINE MIR 96 243 -19 209 270 101 11 chr20 1364322 1364411 -70789471 + L2 LINE L2 3212 3308 -5 215 288 0 17 chr20 1364518 1364577 -70789305 + (TTG)n Simple_repeat Simple_repeat 1 58 0 658 267 6 6 chr20 1364806 1364967 -70788915 + MIR3 SINE MIR 35 195 -13 336 273 118 0 chr20 1365068 1365178 -70788704 - MIR SINE MIR -112 150 28 388 308 70 27 chr20 1365466 1365651 -70788231 - MIR SINE MIR -11 251 59 252 306 107 8 chr20 1365655 1365776 -70788106 + MIR3 SINE MIR 12 144 -64 208 353 43 58 chr20 1365843 1365982 -70787900 - L2 LINE L2 0 3272 3136 21 0 0 0 chr20 1366152 1366173 -70787709 + AT_rich Low_complexity Low_complexity 1 21 0 218 211 19 39 chr20 1366471 1366523 -70787359 - MIR SINE MIR -77 131 81 546 243 95 6 chr20 1366823 1366992 -70786890 + MIR3 SINE MIR 4 187 -21 1958 137 0 0 chr20 1367014 1367291 -70786591 - AluSx SINE Alu -1 311 35 249 271 49 52 chr20 1367857 1368000 -70785882 + MIR SINE MIR 45 185 -35 578 254 123 17 chr20 1368080 1368316 -70785566 - Charlie8 DNA MER1_type -2154 263 3 181 333 16 16 chr20 1369040 1369103 -70784779 - L2 LINE L2 -5 3308 3246 237 188 0 21 chr20 1369127 1369175 -70784707 - L2 LINE L2 -3 3269 3223 234 293 49 12 chr20 1369319 1369401 -70784481 + MIR SINE MIR 152 236 -26 487 309 13 7 chr20 1369514 1369663 -70784219 - MIR SINE MIR -111 151 2 246 287 43 21 chr20 1369763 1369857 -70784025 - MIR SINE MIR -122 140 45 330 276 113 81 chr20 1369885 1370168 -70783714 + L3 LINE CR1 1236 1527 -50 298 301 98 0 chr20 1370841 1370964 -70782918 + MIR SINE MIR 36 170 -92 312 291 102 33 chr20 1371183 1371315 -70782567 - MIR SINE MIR -65 143 4 410 259 11 137 chr20 1372072 1372350 -70781532 + MIR SINE MIR 13 255 -7 385 294 26 46 chr20 1372425 1372578 -70781304 + L3 LINE CR1 1427 1576 -1 276 254 127 0 chr20 1372841 1372951 -70780931 + L2 LINE L2 3188 3311 -2 782 165 2 5 chr20 1373035 1373765 -70780117 + (TG)n Simple_repeat Simple_repeat 1 728 0 684 141 0 32 chr20 1373780 1373965 -70779917 + (TG)n Simple_repeat Simple_repeat 2 180 0 3049 212 67 28 chr20 1374060 1374359 -70779523 - L1ME1 LINE L1 -5 6161 5875 1692 102 0 4 chr20 1374359 1374594 -70779288 - AluSg/x SINE Alu -4 308 75 3049 212 67 28 chr20 1374594 1375208 -70778674 - L1ME1 LINE L1 -291 5875 5201 668 114 0 70 chr20 1375299 1375413 -70778469 - AluJb SINE Alu -8 304 199 196 300 0 0 chr20 1376081 1376141 -70777741 - L2 LINE L2 -285 2987 2928 360 257 48 53 chr20 1376209 1376377 -70777505 - MIR SINE MIR -62 146 3 253 380 44 19 chr20 1376798 1377069 -70776813 + L2 LINE L2 2444 2721 -593 565 298 133 14 chr20 1377807 1378086 -70775796 + L1ME4a LINE L1 5527 5838 -283 284 326 34 48 chr20 1378944 1379091 -70774791 + MIR3 SINE MIR 30 174 -34 529 259 89 49 chr20 1379151 1379375 -70774507 - Charlie8 DNA MER1_type -2184 233 1 1460 259 127 23 chr20 1380026 1380956 -70772926 - L2 LINE L2 -2 3311 2301 470 291 73 68 chr20 1381170 1381404 -70772478 - MIR SINE MIR 0 262 28 2333 82 16 0 chr20 1381498 1381803 -70772079 + AluSg SINE Alu 1 310 0 396 335 30 0 chr20 1383149 1383316 -70770566 + MIR3 SINE MIR 37 208 0 2138 122 0 3 chr20 1384293 1384605 -70769277 - AluSx SINE Alu -1 311 1 405 0 0 0 chr20 1385196 1385241 -70768641 + (CA)n Simple_repeat Simple_repeat 2 46 0 1320 169 73 15 chr20 1385251 1385523 -70768359 + AluJo SINE Alu 5 292 -20 3948 163 30 34 chr20 1385543 1385605 -70768277 - L1MB7 LINE L1 0 6184 6123 2024 116 0 26 chr20 1385605 1385908 -70767974 + AluSx SINE Alu 1 295 -17 3948 163 30 34 chr20 1385908 1386601 -70767281 - L1MB7 LINE L1 -61 6123 5432 196 195 24 0 chr20 1387584 1387625 -70766257 - MIR SINE MIR -57 151 110 254 246 35 0 chr20 1387684 1387741 -70766141 - MIR3 SINE MIR -6 202 144 310 350 148 7 chr20 1388146 1388429 -70765453 + L2 LINE L2 2540 2862 -452 668 246 24 43 chr20 1388668 1388904 -70764978 - MIR SINE MIR -18 244 15 186 231 15 46 chr20 1389801 1389866 -70764016 + MIR SINE MIR 34 96 -166 625 280 30 0 chr20 1390516 1390716 -70763166 + MIR SINE MIR 47 252 -10 281 256 112 8 chr20 1391684 1391809 -70762073 + MIR3 SINE MIR 65 202 -6 190 311 133 22 chr20 1392174 1392309 -70761573 + MIR SINE MIR 67 216 -46 354 211 26 0 chr20 1393052 1393128 -70760754 + MIR SINE MIR 77 154 -108 425 302 149 34 chr20 1393136 1393457 -70760425 - MLT1J LTR MaLR -32 479 122 260 264 69 0 chr20 1393488 1393560 -70760322 - MLT1L LTR MaLR -536 79 3 369 0 0 0 chr20 1394488 1394529 -70759353 + (TG)n Simple_repeat Simple_repeat 2 42 0 232 290 130 29 chr20 1395841 1395979 -70757903 + MIR SINE MIR 81 232 -30 883 194 5 5 chr20 1397196 1397382 -70756500 - L1MB7 LINE L1 0 6184 5999 286 212 12 12 chr20 1397431 1397516 -70756366 - L1MB7 LINE L1 -101 6083 5999 286 212 12 12 chr20 1397498 1397583 -70756299 - L1MB7 LINE L1 -101 6083 5999 286 212 12 12 chr20 1397565 1397650 -70756232 - L1MB7 LINE L1 -101 6083 5999 286 212 12 12 chr20 1397699 1397784 -70756098 - L1MB7 LINE L1 -101 6083 5999 286 224 12 12 chr20 1397766 1397851 -70756031 - L1MB7 LINE L1 -101 6083 5999 * 299 224 12 12 chr20 1397833 1397918 -70755964 - L1MB7 LINE L1 -101 6083 5999 * 301 212 12 12 chr20 1397900 1397985 -70755897 - L1MB7 LINE L1 -101 6083 5999 286 224 12 12 chr20 1397967 1398052 -70755830 - L1MB7 LINE L1 -101 6083 5999 * 301 212 12 12 chr20 1398034 1398119 -70755763 - L1MB7 LINE L1 -101 6083 5999 286 212 12 12 chr20 1398101 1398186 -70755696 - L1MB7 LINE L1 -101 6083 5999 * 286 212 12 12 chr20 1398168 1398253 -70755629 - L1MB7 LINE L1 -101 6083 5999 * 809 160 28 28 chr20 1398235 1398416 -70755466 - L1MB7 LINE L1 -101 6083 5903 365 292 65 13 chr20 1398836 1398990 -70754892 + L2 LINE L2 2866 3027 -245 241 163 0 20 chr20 1406423 1406472 -70747410 + G-rich Low_complexity Low_complexity 2 49 0 325 261 0 109 chr20 1407516 1407582 -70746300 - MIR SINE MIR -3 259 210 1855 147 13 7 chr20 1407582 1407881 -70746001 - AluJb SINE Alu -11 301 1 325 261 0 109 chr20 1407881 1407933 -70745949 - MIR SINE MIR -52 210 154 1124 241 20 3 chr20 1409587 1409890 -70743992 + L1MD2 LINE L1 4076 4383 -1763 1930 139 7 7 chr20 1409890 1410244 -70743638 + AluSx SINE Alu 1 354 0 829 144 0 8 chr20 1410293 1410425 -70743457 + FLAM_C SINE Alu 1 131 -2 2058 232 92 12 chr20 1410447 1410930 -70742952 + L1MD2 LINE L1 4387 4948 -1198 1809 149 3 0 chr20 1410930 1411243 -70742639 + AluSx SINE Alu 1 314 0 2058 232 92 12 chr20 1411243 1411479 -70742403 + L1MD2 LINE L1 4948 5164 -982 300 160 120 0 chr20 1411482 1411557 -70742325 + L1MD2 LINE L1 5204 5287 -859 1261 140 4 68 chr20 1411571 1411807 -70742075 + AluJb SINE Alu 85 305 -7 3849 180 44 21 chr20 1411808 1412081 -70741801 + L1MD2 LINE L1 5311 5576 -783 2052 128 0 0 chr20 1412081 1412370 -70741512 - AluJb SINE Alu -21 291 3 3849 180 44 21 chr20 1412370 1412909 -70740973 + L1MD2 LINE L1 5576 6142 -217 465 277 40 0 chr20 1412907 1413055 -70740827 + L1MD3 LINE L1 7832 7985 -10 * 21 0 0 0 chr20 1413066 1413087 -70740795 + AT_rich Low_complexity Low_complexity 1 21 0 1000 230 0 0 chr20 1414523 1414719 -70739163 + MLT1B LTR MaLR 191 386 -4 246 309 39 1 chr20 1415069 1415174 -70738708 - MIR SINE MIR -87 121 16 622 302 95 59 chr20 1417183 1417407 -70736475 + L2 LINE L2 2583 2798 -474 312 315 129 46 chr20 1417407 1417709 -70736173 + MER102a DNA MER1_type 1 327 -3 622 302 95 59 chr20 1417709 1418112 -70735770 + L2 LINE L2 2798 3234 -38 1876 162 3 0 chr20 1418251 1418553 -70735329 - AluJo SINE Alu -9 303 1 582 268 70 29 chr20 1418556 1418799 -70735083 + MER102a DNA MER1_type 59 311 -19 972 203 143 4 chr20 1419330 1419596 -70734286 + MER2 DNA MER2_type 43 345 0 204 185 148 0 chr20 1419667 1419721 -70734161 - L2 LINE L2 -1 3271 3210 287 293 61 100 chr20 1419754 1420034 -70733848 + L2 LINE L2 3004 3272 0 832 234 107 144 chr20 1420044 1420698 -70733184 + MER20B DNA MER1_type 32 661 -122 210 304 121 29 chr20 1421900 1422107 -70731775 + L2 LINE L2 2344 2569 -745 205 239 0 0 chr20 1422352 1422398 -70731484 - L2 LINE L2 -2 3311 3266 295 269 244 0 chr20 1422434 1422553 -70731329 + L2 LINE L2 3165 3312 -1 378 214 50 94 chr20 1423342 1423501 -70730381 + MIR SINE MIR 108 259 -3 755 300 79 30 chr20 1423502 1424094 -70729788 - L2 LINE L2 0 3313 2614 207 330 82 0 chr20 1424263 1424360 -70729522 - MIR SINE MIR -64 144 40 251 122 61 20 chr20 1425170 1425219 -70728663 + L1ME LINE L1 5599 5649 -472 234 257 171 19 chr20 1425458 1425563 -70728319 + L1ME4a LINE L1 5956 6076 -45 249 263 78 67 chr20 1426120 1426299 -70727583 - MIR SINE MIR -12 250 70 1768 183 0 0 chr20 1427177 1427466 -70726416 - AluJb SINE Alu -23 289 1 318 263 58 7 chr20 1427603 1427740 -70726142 - MER117 DNA MER1_type -49 148 5 334 158 149 79 chr20 1427740 1427825 -70726057 + L2 LINE L2 3151 3247 -25 1519 144 16 84 chr20 1427825 1428145 -70725737 - AluJb SINE Alu -14 298 1 334 158 149 79 chr20 1428145 1428173 -70725709 + L2 LINE L2 3247 3272 0 389 269 170 0 chr20 1428264 1428405 -70725477 + MIR SINE MIR 77 241 -21 213 276 52 0 chr20 1428627 1428685 -70725197 - L2 LINE L2 -16 3256 3196 310 193 0 0 chr20 1428854 1428911 -70724971 - MLT1J LTR MaLR -350 161 105 192 245 151 9 chr20 1428928 1429034 -70724848 + MIR3 SINE MIR 52 172 -36 1003 288 93 11 chr20 1429199 1429577 -70724305 - MLT1I LTR MaLR 0 409 1 736 212 74 5 chr20 1429771 1430057 -70723825 + MLT1A1 LTR MaLR 30 365 0 183 100 0 0 chr20 1430741 1430771 -70723111 + (CATGT)n Simple_repeat Simple_repeat 3 32 0 4335 94 3 24 chr20 1430850 1431236 -70722646 + L1PB2 LINE L1 5539 5909 -242 1919 82 0 16 chr20 1431236 1431491 -70722391 - AluSg SINE Alu 0 310 60 4335 94 3 24 chr20 1431491 1431729 -70722153 + L1PB2 LINE L1 5909 6150 -1 200 244 0 0 chr20 1431929 1431974 -70721908 - MIR SINE MIR -65 143 99 185 308 47 9 chr20 1432274 1432381 -70721501 + MIR3 SINE MIR 50 160 -48 560 228 71 3 chr20 1432966 1433151 -70720731 - MIR SINE MIR -7 255 11 219 296 9 70 chr20 1434070 1434185 -70719697 + MIR SINE MIR 22 129 -79 1079 283 106 31 chr20 1434384 1434896 -70718986 + MLT1K LTR MaLR 33 582 -6 1734 151 33 27 chr20 1434983 1435282 -70718600 - AluSx SINE Alu -11 301 1 700 75 32 0 chr20 1435639 1435733 -70718149 - AluS SINE Alu -214 98 2 1997 157 23 0 chr20 1436122 1436427 -70717455 - AluJo SINE Alu 0 312 1 1246 218 127 6 chr20 1436770 1437101 -70716781 - MER97b DNA MER1_type? -663 390 20 186 191 48 0 chr20 1437226 1437268 -70716614 + MIR SINE MIR 80 123 -139 231 36 0 0 chr20 1437830 1437858 -70716024 + (CA)n Simple_repeat Simple_repeat 1 28 0 190 231 115 0 chr20 1438521 1438573 -70715309 + L2 LINE L2 3189 3246 -67 2322 75 0 3 chr20 1438649 1438941 -70714941 + AluSq SINE Alu 1 291 -22 1978 164 0 0 chr20 1439006 1439310 -70714572 + AluJb SINE Alu 1 304 -8 202 231 0 0 chr20 1439375 1439414 -70714468 + MER91 DNA MER1_type 6 44 -96 3083 57 16 0 chr20 1439429 1439800 -70714082 - MER51B LTR ERV1 0 377 1 502 244 44 19 chr20 1439814 1439974 -70713908 + L1ME LINE L1 5566 5729 -392 30 27 0 0 chr20 1440304 1440341 -70713541 + AT_rich Low_complexity Low_complexity 1 37 0 1433 189 23 8 chr20 1440704 1440969 -70712913 + MLT1F LTR MaLR 1 269 -273 6034 194 40 17 chr20 1441102 1443507 -70710375 - L1MC2 LINE L1 -146 6592 4136 14842 143 43 42 chr20 1443517 1445605 -70708277 - L1MA3 LINE L1 -10 7714 5630 180 0 0 0 chr20 1445605 1445625 -70708257 + (TTTC)n Simple_repeat Simple_repeat 2 21 0 14842 143 43 42 chr20 1445625 1446008 -70707874 - L1MA3 LINE L1 -2094 5630 5249 1454 108 10 20 chr20 1446008 1446212 -70707670 - AluSq SINE Alu -24 289 88 14842 143 43 42 chr20 1446212 1447828 -70706054 - L1MA3 LINE L1 -2475 5249 3636 1196 55 0 22 chr20 1447828 1448010 -70705872 + (TTCC)n Simple_repeat Simple_repeat 3 180 0 1908 151 7 10 chr20 1448012 1448311 -70705571 - AluSx SINE Alu -14 298 1 14842 143 43 42 chr20 1448311 1448866 -70705016 - L1MA3 LINE L1 -4088 3636 3083 1646 179 29 0 chr20 1448866 1449146 -70704736 - AluJb SINE Alu -14 298 11 14842 143 43 42 chr20 1449146 1451453 -70702429 - L1MA3 LINE L1 -4641 3083 9 1057 244 7 21 chr20 1451452 1451731 -70702151 - L1MC2 LINE L1 -2391 4149 3875 * 1530 194 27 36 chr20 1451773 1452138 -70701744 - L1MC2 LINE L1 -3333 3207 2846 1088 209 24 91 chr20 1452165 1452539 -70701343 - L1MC2 LINE L1 -4887 1653 1305 1833 165 0 16 chr20 1452539 1452855 -70701027 + AluJb SINE Alu 1 311 -1 765 162 0 0 chr20 1452858 1452975 -70700907 + FLAM_C SINE Alu 2 118 -25 25 31 0 0 chr20 1452975 1453007 -70700875 + AT_rich Low_complexity Low_complexity 1 32 0 976 237 70 40 chr20 1453008 1453020 -70700862 - L1MC2 LINE L1 -5228 1315 1305 2433 90 3 3 chr20 1453020 1453330 -70700552 - AluSp SINE Alu -3 310 1 976 237 70 40 chr20 1453330 1453714 -70700168 - L1MC2 LINE L1 -5238 1305 907 257 269 21 32 chr20 1454140 1454233 -70699649 - L1MC2 LINE L1 -6098 442 351 681 67 0 0 chr20 1454242 1454332 -70699550 + AluSg/x SINE Alu 211 300 -9 990 278 24 7 chr20 1454347 1454642 -70699240 - L1MC2 LINE L1 -6207 333 34 1404 199 36 48 chr20 1454680 1454956 -70698926 - L1ME1 LINE L1 -6 6160 5887 2393 85 0 0 chr20 1454956 1455249 -70698633 + AluSc SINE Alu 1 293 -16 1404 199 36 48 chr20 1455249 1455328 -70698554 - L1ME1 LINE L1 -279 5887 5809 1500 170 8 133 chr20 1455989 1456365 -70697517 + MER7A DNA MER2_type 1 327 -19 688 137 103 57 chr20 1456728 1456903 -70696979 + Charlie1 DNA MER1_type 2382 2564 -197 1037 214 47 85 chr20 1456904 1457269 -70696613 + HAL1 LINE L1 1297 1647 -860 1125 237 21 21 chr20 1457282 1457565 -70696317 + MLT1H LTR MaLR 15 297 -252 201 162 0 0 chr20 1457885 1457922 -70695960 + A-rich Low_complexity Low_complexity 1 37 0 222 262 84 9 chr20 1458105 1458212 -70695670 + L2 LINE L2 2538 2652 -662 544 209 368 19 chr20 1458226 1458585 -70695297 - MLT1H1 LTR MaLR 0 555 72 841 128 8 0 chr20 1458667 1458784 -70695098 + AluJb SINE Alu 169 286 -26 193 296 37 46 chr20 1459034 1459142 -70694740 + L2 LINE L2 3160 3266 -47 4829 38 24 2 chr20 1460078 1460656 -70693226 + LTR10C LTR ERV1 1 591 0 291 218 100 45 chr20 1461034 1461144 -70692738 + MLT1L LTR MaLR 43 158 -457 1810 178 65 31 chr20 1461203 1461586 -70692296 - MSTD LTR MaLR 0 396 1 1170 224 50 37 chr20 1461963 1462346 -70691536 + LTR37A LTR ERV1 39 426 0 2230 99 3 0 chr20 1462654 1462947 -70690935 + AluY SINE Alu 4 297 -14 2231 162 84 41 chr20 1462955 1463418 -70690464 - MLT1D LTR MaLR 0 505 23 444 253 48 42 chr20 1463514 1463680 -70690202 + L1ME2 LINE L1 5897 6063 -101 208 196 22 0 chr20 1463775 1463821 -70690061 + (TAGA)n Simple_repeat Simple_repeat 4 50 0 23 78 0 0 chr20 1465346 1465397 -70688485 + AT_rich Low_complexity Low_complexity 1 51 0 762 198 17 17 chr20 1466054 1466226 -70687656 - MER5B DNA MER1_type 0 178 7 334 304 74 0 chr20 1466982 1467117 -70686765 + MIR3 SINE MIR 35 179 -29 1198 301 40 0 chr20 1470110 1470508 -70683374 + L1MC/D LINE L1 5405 5818 -1990 2162 111 0 0 chr20 1470519 1470798 -70683084 - AluSq SINE Alu -13 300 22 604 90 0 0 chr20 1470798 1470876 -70683006 - AluS SINE Alu -234 79 2 256 93 5 43 chr20 1472314 1472364 -70681518 - MIR SINE MIR -62 146 101 26 64 0 0 chr20 1472377 1472424 -70681458 + AT_rich Low_complexity Low_complexity 1 47 0 297 268 105 65 chr20 1473759 1473912 -70679970 + MLT1L LTR MaLR 240 398 -217 2450 133 13 5 chr20 1474005 1474388 -70679494 + L1MC1 LINE L1 5939 6324 -9 383 239 0 34 chr20 1474675 1474763 -70679119 + MER112 DNA MER1_type 168 252 -8 189 0 0 0 chr20 1475034 1475055 -70678827 + (CTG)n Simple_repeat Simple_repeat 1 21 0 231 272 61 35 chr20 1475785 1475899 -70677983 + L1MEc LINE L1 89 205 -6191 2650 217 43 2 chr20 1475917 1476520 -70677362 + L1MEc LINE L1 297 924 -5472 293 143 0 18 chr20 1476531 1476587 -70677295 + L1MEc LINE L1 1027 1081 -5315 * 2895 205 79 12 chr20 1476579 1477621 -70676261 + L1ME1 LINE L1 4916 6015 -151 1227 143 52 149 chr20 1479207 1479536 -70674346 + AluJo SINE Alu 1 297 -5 2034 113 3 3 chr20 1480790 1481090 -70672792 + AluSx SINE Alu 1 300 -12 1088 286 134 24 chr20 1481187 1481803 -70672079 + L2 LINE L2 2611 3304 -9 283 328 139 46 chr20 1482065 1482431 -70671451 - L2 LINE L2 -3 3269 2870 214 250 0 0 chr20 1482588 1482640 -70671242 + A-rich Low_complexity Low_complexity 4 55 0 273 62 42 0 chr20 1482852 1482900 -70670982 + L1MB8 LINE L1 6124 6173 -5 519 231 127 0 chr20 1482923 1483096 -70670786 + L1MC4 LINE L1 6741 7011 -827 1511 144 41 14 chr20 1483246 1483537 -70670345 + AluJb SINE Alu 1 299 -13 465 258 65 31 chr20 1483573 1483802 -70670080 + L1MC4 LINE L1 7112 7348 -694 304 248 155 8 chr20 1483937 1484066 -70669816 + L1MC4 LINE L1 7492 7639 -403 245 293 57 57 chr20 1484162 1484268 -70669614 - MIR SINE MIR -109 153 48 796 291 117 33 chr20 1484358 1484962 -70668920 + L2 LINE L2 2630 3302 -11 211 176 0 0 chr20 1486029 1486063 -70667819 + G-rich Low_complexity Low_complexity 1 34 0 231 218 0 0 chr20 1487413 1487468 -70666414 + GA-rich Low_complexity Low_complexity 3 57 0 201 283 33 0 chr20 1487768 1487828 -70666054 + MIR SINE MIR 128 189 -73 342 253 0 0 chr20 1488178 1488257 -70665625 + MIR SINE MIR 83 161 -101 604 320 48 69 chr20 1489241 1489259 -70664623 - L2 LINE L2 -13 3300 3283 2063 181 81 12 chr20 1489259 1489690 -70664192 + MER65C LTR ERV1 1 461 0 604 320 48 69 chr20 1489690 1490105 -70663777 - L2 LINE L2 -30 3283 2876 1926 138 37 45 chr20 1490138 1490178 -70663704 - THE1C LTR MaLR 0 375 336 2076 121 3 7 chr20 1490178 1490485 -70663397 + AluSx SINE Alu 1 306 -6 1926 138 37 45 chr20 1490485 1490822 -70663060 - THE1C LTR MaLR -39 336 1 282 181 181 43 chr20 1490827 1490921 -70662961 + MLT1G LTR MaLR 1 107 -483 1450 269 54 14 chr20 1490951 1491393 -70662489 - MLT1J LTR MaLR -30 481 22 1267 193 28 44 chr20 1492163 1492484 -70661398 - L1MDa LINE L1 -4865 1675 1360 2686 134 26 16 chr20 1492484 1492909 -70660973 + LTR3 LTR ERVK 1 429 -3 18221 87 44 16 chr20 1492918 1495506 -70658376 + HERVK3 LTR ERVK 2 2661 -4582 462 156 77 0 chr20 1495505 1495622 -70658260 + HERVK3 LTR ERVK 3536 5364 -581 * 2706 76 0 0 chr20 1495618 1495961 -70657921 + HERVK3 LTR ERVK 3965 4307 -2936 * 4695 109 9 0 chr20 1495960 1496628 -70657254 + HERVK3 LTR ERVK 4685 5358 -1885 * 7178 93 6 23 chr20 1496623 1496683 -70657199 + HERVK3 LTR ERVK 6264 6324 -919 2072 108 0 14 chr20 1496683 1497008 -70656874 - AluY SINE Alu 0 311 2 7178 93 6 23 chr20 1497008 1497942 -70655940 + HERVK3 LTR ERVK 6324 7241 -2 2716 144 7 21 chr20 1497943 1498374 -70655508 + LTR3 LTR ERVK 1 425 -7 280 211 9 37 chr20 1498387 1498496 -70655386 - L1MDa LINE L1 -5173 1367 1262 493 191 0 11 chr20 1498498 1498587 -70655295 + AluJ/FLAM SINE Alu 2 89 -223 354 253 13 0 chr20 1499036 1499115 -70654767 - L3 LINE CR1 -107 1470 1391 465 320 163 7 chr20 1499370 1499523 -70654359 + MLT1K LTR MaLR 45 221 -367 1906 176 19 48 chr20 1499523 1499756 -70654126 - MLT1A1 LTR MaLR 0 365 146 2149 83 14 0 chr20 1499756 1500046 -70653836 + AluSp SINE Alu 2 295 -18 1906 176 19 48 chr20 1500046 1500187 -70653695 - MLT1A1 LTR MaLR -219 146 2 435 178 32 189 chr20 1500231 1500417 -70653465 - MLT1A2 LTR MaLR -103 287 122 2089 110 7 0 chr20 1500417 1500718 -70653164 - AluSp SINE Alu -6 307 5 435 178 32 189 chr20 1500718 1500748 -70653134 - MLT1A2 LTR MaLR -268 122 89 2583 105 17 168 chr20 1500748 1501289 -70652593 - LTR32 LTR ERVL 0 471 13 513 189 33 0 chr20 1501287 1501377 -70652505 - MLT1A2 LTR MaLR -281 93 1 * 407 244 81 16 chr20 1501438 1501561 -70652321 + MLT1K LTR MaLR 456 586 -2 963 220 11 0 chr20 1501651 1501828 -70652054 - MER5A DNA MER1_type -4 185 7 223 254 164 0 chr20 1502057 1502124 -70651758 + L2 LINE L2 2740 2817 -497 359 311 92 0 chr20 1502625 1502744 -70651138 - MIR SINE MIR -49 213 84 1608 215 65 71 chr20 1502744 1503252 -70650630 + MLT1D LTR MaLR 1 505 0 1713 236 83 14 chr20 1503703 1504185 -70649697 - REP3 LTR ERV -47 515 1 324 0 0 0 chr20 1504264 1504300 -70649582 + (TG)n Simple_repeat Simple_repeat 2 37 0 1561 183 7 7 chr20 1504303 1504582 -70649300 - AluJb SINE Alu -33 279 1 1108 120 26 26 chr20 1504582 1504773 -70649109 - L1MB3 LINE L1 -40 6143 5953 444 277 177 17 chr20 1505231 1505550 -70648332 + MLT1J LTR MaLR 59 470 -41 208 219 24 0 chr20 1505584 1505625 -70648257 - MIR SINE MIR -139 69 28 221 380 23 8 chr20 1505746 1505875 -70648007 + L2 LINE L2 2582 2712 -602 882 121 109 6 chr20 1506030 1506195 -70647687 - L1M4 LINE L1 -550 5634 5453 292 319 11 0 chr20 1506195 1506286 -70647596 + MLT1L LTR MaLR 218 309 -306 3977 205 30 13 chr20 1506286 1506637 -70647245 + L1M4 LINE L1 3682 4026 -2120 1699 176 0 0 chr20 1506637 1506952 -70646930 + AluJb SINE Alu 1 315 0 3977 205 30 13 chr20 1506952 1507544 -70646338 + L1M4 LINE L1 4026 4642 -1504 757 315 13 4 chr20 1507544 1507782 -70646100 + MER76 LTR ERV 415 654 -34 6903 236 50 28 chr20 1507797 1509066 -70644816 + L1MD2 LINE L1 2160 3399 -2960 2120 103 14 0 chr20 1509066 1509358 -70644524 + AluSx SINE Alu 1 296 -16 6903 236 50 28 chr20 1509358 1511400 -70642482 + L1MD2 LINE L1 3399 6358 -1 280 250 26 0 chr20 1511483 1511559 -70642323 - L2 LINE L2 -741 2573 2496 356 299 212 11 chr20 1511583 1511956 -70641926 + L2 LINE L2 2622 3069 -203 818 273 82 75 chr20 1512067 1512587 -70641295 + L2 LINE L2 2746 3270 -2 527 285 61 6 chr20 1512702 1512867 -70641015 - MIR SINE MIR -70 192 19 298 295 29 9 chr20 1513026 1513131 -70640751 - MIR SINE MIR -73 135 29 310 264 47 19 chr20 1513620 1513726 -70640156 - MIR SINE MIR -84 124 16 956 216 118 146 chr20 1513937 1514498 -70639384 + MLT1K LTR MaLR 35 579 -9 408 322 159 15 chr20 1514605 1515050 -70638832 - L2 LINE L2 -5 3308 2785 3662 111 26 76 chr20 1515123 1515781 -70638101 - L1PA16 LINE L1 -4 6162 5538 2567 168 13 13 chr20 1515866 1516589 -70637293 - L1PA16 LINE L1 -634 5532 4809 890 269 112 30 chr20 1516589 1516990 -70636892 + MLT1J LTR MaLR 59 492 -19 206 222 22 0 chr20 1516993 1517038 -70636844 - L2 LINE L2 -1092 2222 2177 1841 194 58 47 chr20 1517039 1517554 -70636328 + Charlie1b DNA MER1_type 1 521 -2 658 224 33 13 chr20 1518133 1518285 -70635597 - MIR SINE MIR -57 205 51 473 210 60 0 chr20 1518373 1518473 -70635409 - L2 LINE L2 -11 3302 3197 * 907 285 111 18 chr20 1518450 1518839 -70635043 + L2 LINE L2 2889 3313 0 601 236 155 10 chr20 1518978 1519244 -70634638 - L2 LINE L2 -275 2997 2700 717 191 212 7 chr20 1519595 1519813 -70634069 + MER66A LTR ERV1 97 249 -229 895 152 34 22 chr20 1519830 1520008 -70633874 + L1MA9 LINE L1 6133 6312 0 2547 159 18 8 chr20 1520014 1520615 -70633267 - L1MB7 LINE L1 -35 6149 5417 1125 128 0 0 chr20 1520629 1520793 -70633089 + AluSg/x SINE Alu 132 295 -17 696 309 63 19 chr20 1521013 1521330 -70632552 + L2 LINE L2 2839 3169 -144 663 276 122 5 chr20 1521331 1521449 -70632433 + MER8 DNA MER2_type 1 104 -135 1040 173 0 12 chr20 1521449 1521617 -70632265 - FRAM SINE Alu 0 166 1 663 276 122 5 chr20 1521617 1521712 -70632170 + MER8 DNA MER2_type 104 239 0 421 295 124 0 chr20 1521712 1521841 -70632041 + L2 LINE L2 3169 3313 0 455 223 32 0 chr20 1521845 1521939 -70631943 - MIR SINE MIR -70 138 42 198 303 98 25 chr20 1522199 1522321 -70631561 + L3 LINE CR1 1335 1465 -112 334 269 17 17 chr20 1522777 1522896 -70630986 + L1MC/D LINE L1 5313 5431 -2377 338 314 99 42 chr20 1522914 1523197 -70630685 + L1MDa LINE L1 27 325 -6215 925 261 18 65 chr20 1523720 1524061 -70629821 + L1MDa LINE L1 926 1250 -5293 1415 170 63 7 chr20 1524071 1524087 -70629795 - L1MB5 LINE L1 -4 6170 6156 2169 91 0 3 chr20 1524087 1524383 -70629499 + AluSg SINE Alu 1 295 -15 1415 170 63 7 chr20 1524383 1524666 -70629216 - L1MB5 LINE L1 -18 6156 5854 1186 209 129 112 chr20 1524752 1525204 -70628678 - MER77 LTR ERV1 -7 598 134 1430 157 44 27 chr20 1525348 1525557 -70628325 - L1MB5 LINE L1 -315 5859 5642 2531 219 20 34 chr20 1525557 1526119 -70627763 + MLT2B3 LTR ERVL 1 554 0 1430 157 44 27 chr20 1526119 1526203 -70627679 - L1MB5 LINE L1 -532 5642 5561 6119 194 57 44 chr20 1526868 1528779 -70625103 - L1MB5 LINE L1 -591 5583 3633 3184 219 38 60 chr20 1528834 1528915 -70624967 + L1MD2 LINE L1 5255 5336 -1023 2295 84 0 0 chr20 1528915 1529214 -70624668 - AluY SINE Alu -12 299 1 3184 219 38 60 chr20 1529214 1529557 -70624325 + L1MD2 LINE L1 5336 5685 -674 3535 124 13 19 chr20 1529557 1530087 -70623795 + MER1A DNA MER1_type 1 527 0 3184 219 38 60 chr20 1530087 1530572 -70623310 + L1MD2 LINE L1 5685 6145 -214 895 193 164 81 chr20 1530700 1531147 -70622735 + MER66A LTR ERV1 97 478 0 458 288 8 0 chr20 1531158 1531276 -70622606 - MIR SINE MIR -115 147 29 2165 122 0 3 chr20 1532240 1532551 -70621331 + AluSx SINE Alu 2 311 -1 489 277 79 17 chr20 1532584 1532761 -70621121 + MIR SINE MIR 71 258 -4 2000 124 0 0 chr20 1532762 1533086 -70620796 + AluSx SINE Alu 1 324 0 376 224 103 17 chr20 1533093 1533209 -70620673 + L1MC/D LINE L1 5415 5540 -2268 287 220 202 0 chr20 1533220 1533329 -70620553 + L1MC/D LINE L1 5622 5752 -2056 717 185 151 5 chr20 1533425 1533630 -70620252 - HsTC2 DNA Tc2 -7 1891 1657 296 213 38 25 chr20 1533637 1533717 -70620165 - MER104 DNA Tc2 -89 91 11 182 224 118 40 chr20 1534802 1534878 -70619004 + MIR SINE MIR 34 115 -147 458 224 69 9 chr20 1534939 1535055 -70618827 + MIR SINE MIR 119 241 -21 506 288 114 50 chr20 1535074 1535293 -70618589 - MIR SINE MIR -12 250 18 304 302 236 5 chr20 1535447 1535659 -70618223 + MIR SINE MIR 2 262 0 604 291 64 9 chr20 1535999 1536219 -70617663 - L2 LINE L2 -5 3308 3077 307 327 193 15 chr20 1539679 1540121 -70613761 + L2 LINE L2 2656 3200 -72 270 216 0 0 chr20 1540777 1540828 -70613054 + MIR SINE MIR 99 149 -59 387 289 83 0 chr20 1541090 1541211 -70612671 - MIR3 SINE MIR -52 156 26 309 280 60 10 chr20 1541589 1541689 -70612193 - L2 LINE L2 -21 3251 3147 182 308 0 0 chr20 1541756 1541808 -70612074 + MIR SINE MIR 92 143 -119 183 311 67 37 chr20 1542372 1542507 -70611375 + L2 LINE L2 1295 1433 -1881 1424 113 43 43 chr20 1543007 1543237 -70610645 - MER30 DNA MER1_type 0 230 1 344 252 110 24 chr20 1543478 1543605 -70610277 - MIR SINE MIR -11 251 114 372 259 16 0 chr20 1543764 1543853 -70610029 + MIR SINE MIR 58 148 -62 383 291 50 27 chr20 1543931 1544107 -70609775 + MIR SINE MIR 18 208 -54 746 263 65 35 chr20 1544319 1544551 -70609331 - MIR SINE MIR -13 249 11 180 287 244 43 chr20 1544807 1544922 -70608960 + MIR SINE MIR 107 244 -18 307 122 0 0 chr20 1545663 1545712 -70608170 + U5 snRNA snRNA 1 49 -67 366 277 203 16 chr20 1546328 1546644 -70607238 + L1ME4a LINE L1 5531 5905 -216 292 316 64 0 chr20 1547145 1547266 -70606616 + MIR SINE MIR 25 151 -62 654 230 163 15 chr20 1547835 1548031 -70605851 - MIR SINE MIR -17 245 21 349 322 27 4 chr20 1549006 1549119 -70604763 + MIR SINE MIR 2 109 -103 475 292 63 63 chr20 1550141 1550473 -70603409 - MER102b DNA MER1_type -9 332 1 408 336 112 8 chr20 1550871 1551139 -70602743 - L2 LINE L2 -37 3235 2940 182 250 23 0 chr20 1551140 1551184 -70602698 - L2 LINE L2 -1042 2272 2228 346 258 111 79 chr20 1551283 1551473 -70602409 + MIR3 SINE MIR 48 243 -19 581 227 45 0 chr20 1552391 1552545 -70601337 + L1ME4a LINE L1 5589 5749 -372 275 241 134 36 chr20 1552649 1552761 -70601121 + L1ME4a LINE L1 5953 6075 -46 333 313 20 10 chr20 1552888 1552987 -70600895 + L1ME4a LINE L1 5964 6063 -58 2830 176 50 29 chr20 1552990 1553644 -70600238 - L1MA7 LINE L1 -4 6287 5620 1913 148 172 8 chr20 1554833 1555199 -70598683 + MSTA LTR MaLR 1 426 -2 441 299 72 24 chr20 1555708 1555915 -70597967 + MIR SINE MIR 25 241 -21 755 261 22 0 chr20 1555925 1556109 -70597773 + MER5A DNA MER1_type 2 189 0 747 177 165 6 chr20 1556334 1556498 -70597384 + MER3 DNA MER1_type 19 208 -1 219 324 67 9 chr20 1556704 1556809 -70597073 + MIR SINE MIR 95 205 -57 578 171 85 136 chr20 1557380 1557579 -70596303 + MIR SINE MIR 74 262 0 2324 83 0 6 chr20 1558193 1558506 -70595376 - AluY SINE Alu 0 311 1 905 177 66 25 chr20 1558624 1558822 -70595060 - MIR SINE MIR -44 218 13 703 274 68 13 chr20 1560384 1560621 -70593261 - MIR SINE MIR 0 262 13 235 340 85 39 chr20 1560850 1561003 -70592879 - L2 LINE L2 -13 3259 3100 193 185 123 31 chr20 1561069 1561134 -70592748 + MIR3 SINE MIR 95 165 -43 647 244 93 6 chr20 1561275 1561447 -70592435 + MIR SINE MIR 32 218 -44 610 231 208 46 chr20 1561445 1561661 -70592221 + MIR SINE MIR 10 260 -2 * 472 216 88 0 chr20 1561707 1561809 -70592073 - L2 LINE L2 -4 3309 3199 451 258 50 0 chr20 1562866 1562986 -70590896 - L2 LINE L2 0 3313 3188 499 272 65 22 chr20 1563014 1563314 -70590568 + L2 LINE L2 2727 3039 -274 2045 237 16 19 chr20 1563357 1563843 -70590039 + LTR10B LTR ERV1 21 505 0 290 310 23 0 chr20 1563849 1563936 -70589946 + L2 LINE L2 2959 3047 -225 865 267 85 12 chr20 1563965 1564295 -70589587 - MER20B DNA MER1_type -393 390 37 478 251 75 43 chr20 1564568 1564768 -70589114 - MIR SINE MIR -6 256 1 286 303 20 13 chr20 1564975 1565127 -70588755 + C-rich Low_complexity Low_complexity 1 153 0 200 309 37 44 chr20 1565139 1565275 -70588607 + C-rich Low_complexity Low_complexity 3 137 0 256 119 0 0 chr20 1565572 1565614 -70588268 + Alu SINE Alu 259 300 -2 230 225 56 14 chr20 1565753 1565824 -70588058 + L1ME3A LINE L1 5411 5484 -2324 346 186 14 0 chr20 1565824 1565894 -70587988 + LTR60 LTR ERV1 1 71 -515 960 247 44 76 chr20 1566028 1566108 -70587774 + LTR43 LTR ERV1 131 212 -492 2119 117 0 7 chr20 1566108 1566416 -70587466 + AluSg SINE Alu 1 306 -4 960 247 44 76 chr20 1566416 1566811 -70587071 + LTR43 LTR ERV1 212 684 -20 403 292 100 26 chr20 1566824 1567216 -70586666 + L1ME3A LINE L1 5484 5909 -280 579 286 150 18 chr20 1568248 1568475 -70585407 - MIR SINE MIR 0 262 6 927 290 62 31 chr20 1568531 1568917 -70584965 + L2 LINE L2 2892 3289 -24 245 254 127 0 chr20 1568942 1569013 -70584869 - L2 LINE L2 -65 3248 3169 599 216 6 0 chr20 1569027 1569189 -70584693 + (CA)n Simple_repeat Simple_repeat 2 164 0 439 257 104 50 chr20 1569194 1569442 -70584440 - L2 LINE L2 -167 3146 2794 1478 211 109 93 chr20 1569512 1570006 -70583876 - MLT1D LTR MaLR 0 505 4 191 167 83 67 chr20 1570184 1570244 -70583638 + MIR SINE MIR 190 250 -12 2218 90 3 3 chr20 1570258 1570557 -70583325 - AluSq SINE Alu -14 299 1 533 172 60 26 chr20 1570727 1570843 -70583039 - MER20 DNA MER1_type -99 120 1 807 280 64 15 chr20 1570956 1571220 -70582662 + MLT1J LTR MaLR 1 277 -234 348 306 116 7 chr20 1572266 1572413 -70581469 - MIR SINE MIR -65 197 35 350 268 121 56 chr20 1572514 1572712 -70581170 - MIR SINE MIR -31 231 21 258 242 145 73 chr20 1572756 1572880 -70581002 - L3 LINE CR1 -130 1447 1315 346 297 55 0 chr20 1573262 1573353 -70580529 + L2 LINE L2 3169 3264 -8 1992 115 7 0 chr20 1573370 1573657 -70580225 - AluSq SINE Alu -24 289 1 532 272 54 16 chr20 1573697 1573881 -70580001 - L2 LINE L2 -182 3090 2900 208 304 0 39 chr20 1574320 1574422 -70579460 + CT-rich Low_complexity Low_complexity 3 100 0 306 226 154 81 chr20 1574434 1574655 -70579227 - L2 LINE L2 -1 3271 3035 281 372 26 19 chr20 1574725 1574881 -70579001 - MIR SINE MIR -59 203 47 503 265 126 47 chr20 1574990 1575307 -70578575 + MLT1I LTR MaLR 39 380 -29 525 308 110 22 chr20 1575950 1576105 -70577777 - MIR SINE MIR 0 262 79 2300 160 18 5 chr20 1576105 1576488 -70577394 + MLT1B LTR MaLR 3 390 0 525 308 110 22 chr20 1576488 1576559 -70577323 - MIR SINE MIR -183 79 16 224 319 0 0 chr20 1576769 1576841 -70577041 - MIR SINE MIR -59 203 132 911 111 7 22 chr20 1576864 1576999 -70576883 - AluJo/FLAM SINE Alu -169 133 1 250 273 53 68 chr20 1576999 1577131 -70576751 - MIR SINE MIR -111 151 22 465 236 149 6 chr20 1577587 1577748 -70576134 + L1ME1 LINE L1 506 689 -5707 430 226 0 17 chr20 1577757 1577872 -70576010 + L1ME1 LINE L1 1874 1986 -4410 1653 122 86 16 chr20 1577880 1578183 -70575699 - L1MA4A LINE L1 -102 6903 6580 648 158 0 0 chr20 1578183 1578297 -70575585 + CT-rich Low_complexity Low_complexity 3 116 0 637 108 0 0 chr20 1578298 1578381 -70575501 - AluSg/x SINE Alu -59 251 169 3701 123 19 57 chr20 1578383 1578792 -70575090 - L1MA4A LINE L1 -417 6588 6165 2202 121 0 0 chr20 1578792 1579090 -70574792 - AluSx SINE Alu -14 298 1 3701 123 19 57 chr20 1579090 1579656 -70574226 - L1MA4A LINE L1 -840 6165 1728 2984 134 30 44 chr20 1579703 1580565 -70573317 + L1MA4A LINE L1 4795 5643 -660 3254 136 12 4 chr20 1580572 1581078 -70572804 + L1MA4A LINE L1 5794 6303 0 7571 222 65 35 chr20 1581078 1581315 -70572567 + L1ME1 LINE L1 2985 3214 -3021 338 0 24 0 chr20 1581315 1581357 -70572525 + (CA)n Simple_repeat Simple_repeat 2 44 0 7571 222 65 35 chr20 1581357 1581745 -70572137 + L1ME1 LINE L1 3214 3589 -2646 2223 138 0 0 chr20 1581745 1582056 -70571826 - AluSx SINE Alu -1 311 1 7571 222 65 35 chr20 1582056 1583324 -70570558 + L1ME1 LINE L1 3589 4818 -1417 732 178 99 40 chr20 1583324 1583476 -70570406 - FAM SINE Alu -10 165 5 7571 222 65 35 chr20 1583476 1584045 -70569837 + L1ME1 LINE L1 4818 5369 -866 1609 138 0 94 chr20 1584045 1584343 -70569539 + AluJb SINE Alu 25 294 -18 7571 222 65 35 chr20 1584343 1585056 -70568826 + L1ME1 LINE L1 5369 6230 -5 228 250 69 14 chr20 1585418 1585490 -70568392 + MIR SINE MIR 117 192 -70 842 190 80 0 chr20 1585510 1585673 -70568209 - MER45A DNA AcHobo -2 176 1 229 269 19 0 chr20 1585807 1585859 -70568023 + L2 LINE L2 3214 3266 -6 * 234 326 204 8 chr20 1585851 1585983 -70567899 - MIR SINE MIR -28 180 23 421 257 135 14 chr20 1586234 1586382 -70567500 - MIR SINE MIR 0 262 97 868 172 86 6 chr20 1586429 1586592 -70567290 + MER45A DNA AcHobo 1 176 -2 254 300 12 0 chr20 1586616 1586696 -70567186 - MIR SINE MIR -73 189 109 305 333 51 31 chr20 1587329 1587524 -70566358 + MIR SINE MIR 23 221 -41 614 213 16 8 chr20 1587863 1587985 -70565897 + MIR SINE MIR 31 153 -109 1716 234 122 30 chr20 1588554 1589055 -70564827 - MLT1H LTR MaLR 0 549 3 794 175 115 65 chr20 1590639 1590856 -70563026 - L1ME2 LINE L1 -2 6162 5935 * 9231 173 8 3 chr20 1590838 1591948 -70561934 - L1 LINE L1 -1872 5693 4428 2355 94 0 0 chr20 1591948 1592246 -70561636 - AluSx SINE Alu -14 298 1 9231 173 8 3 chr20 1592246 1593051 -70560831 - L1 LINE L1 -3137 4428 3629 1290 117 0 0 chr20 1593051 1593230 -70560652 - AluSg/x SINE Alu 0 310 132 267 158 0 0 chr20 1593230 1593268 -70560614 - Alu SINE Alu -263 39 2 21280 144 27 22 chr20 1593276 1596150 -70557732 - L1 LINE L1 -3933 3632 736 3546 118 28 2 chr20 1596150 1596650 -70557232 + LTR10D LTR ERV1 1 513 0 21280 144 27 22 chr20 1596650 1597370 -70556512 - L1 LINE L1 -6829 736 21 282 206 82 123 chr20 1597368 1597611 -70556271 - L1M4c LINE L1 -3938 2446 2214 * 362 217 60 0 chr20 1597673 1597756 -70556126 - Tigger5 DNA MER2_type -2235 88 1 * 427 210 148 37 chr20 1597756 1597851 -70556031 + Tigger5 DNA MER2_type 2208 2320 -3 1528 230 70 23 chr20 1597854 1598505 -70555377 - L1M4c LINE L1 -4169 2215 1454 790 174 0 0 chr20 1598506 1598621 -70555261 - FRAM SINE Alu -20 156 42 1862 290 25 37 chr20 1598627 1599411 -70554471 - L1M2c LINE L1 -4516 1385 663 314 338 40 18 chr20 1599613 1599814 -70554068 - L1M2c LINE L1 -5189 702 237 207 0 0 0 chr20 1600461 1600484 -70553398 + (TG)n Simple_repeat Simple_repeat 1 23 0 * 303 28 0 0 chr20 1600483 1600519 -70553363 + (GA)n Simple_repeat Simple_repeat 1 36 0 198 320 16 57 chr20 1600586 1600708 -70553174 + MIR3 SINE MIR 15 131 -77 1661 248 84 50 chr20 1601736 1602614 -70551268 - L2 LINE L2 -4 3309 2118 831 273 29 12 chr20 1602560 1602802 -70551080 + MIR SINE MIR 12 257 -5 * 1999 212 111 24 chr20 1602920 1602974 -70550908 - L1MC4 LINE L1 -143 7899 7851 1825 163 18 92 chr20 1602974 1603367 -70550515 + MLT1A1 LTR MaLR 2 365 0 1999 212 111 24 chr20 1603367 1603860 -70550022 - L1MC4 LINE L1 -191 7851 7304 355 254 103 30 chr20 1604314 1604479 -70549403 + MLT1L LTR MaLR 3 179 -436 209 83 28 0 chr20 1604583 1604619 -70549263 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 251 218 0 0 chr20 1604956 1605011 -70548871 - L1MA9 LINE L1 -1 6311 6257 335 95 0 149 chr20 1605932 1606006 -70547876 + L1PA10 LINE L1 6106 6168 0 213 333 8 83 chr20 1606069 1606201 -70547681 + MIR3 SINE MIR 81 202 -6 891 294 74 98 chr20 1606683 1607793 -70546089 + L2 LINE L2 2227 3312 -1 1143 211 28 66 chr20 1608094 1608383 -70545499 - AluJb SINE Alu -25 287 10 425 271 98 0 chr20 1608556 1608587 -70545295 - MER96 DNA MER1_type? -29 146 119 2865 96 11 16 chr20 1608587 1608964 -70544918 - THE1C LTR MaLR 0 375 1 425 271 98 0 chr20 1608964 1609065 -70544817 - MER96 DNA MER1_type? -56 119 1 391 269 221 6 chr20 1609601 1609809 -70544073 + MIR SINE MIR 3 252 -10 202 292 15 15 chr20 1609821 1609886 -70543996 - MIR3 SINE MIR -5 203 139 402 147 0 0 chr20 1610034 1610102 -70543780 + (TCCA)n Simple_repeat Simple_repeat 3 70 0 1332 302 68 0 chr20 1610473 1610956 -70542926 - L1ME3A LINE L1 -295 5875 5350 345 226 69 20 chr20 1611947 1612049 -70541833 + MIR SINE MIR 86 192 -70 435 269 87 13 chr20 1612248 1612397 -70541485 - MIR SINE MIR -97 165 6 401 333 45 50 chr20 1612802 1613024 -70540858 - L2 LINE L2 -42 3230 3010 990 256 190 27 chr20 1613086 1613339 -70540543 + MLT1G1 LTR MaLR 1 212 -378 3131 198 20 0 chr20 1613339 1613885 -70539997 + MER41D LTR ERV1 1 557 0 990 256 190 27 chr20 1613885 1614093 -70539789 + MLT1G1 LTR MaLR 212 521 -69 981 244 92 7 chr20 1614383 1614686 -70539196 + Charlie2 DNA MER1_type 31 359 -2423 1480 216 98 65 chr20 1614692 1615303 -70538579 + Charlie2 DNA MER1_type 2230 2860 -2 655 255 143 50 chr20 1615317 1615701 -70538181 - L2 LINE L2 -526 2788 2369 515 158 42 11 chr20 1615856 1615951 -70537931 + MIR SINE MIR 49 146 -62 1032 315 77 12 chr20 1616545 1617024 -70536858 + L2 LINE L2 2804 3313 0 260 386 31 6 chr20 1617719 1617882 -70536000 + L2 LINE L2 2595 2761 -553 1132 242 52 67 chr20 1617897 1618344 -70535538 - HAL1 LINE L1 -25 2482 2043 1526 122 29 29 chr20 1618357 1618635 -70535247 - L1MA1 LINE L1 0 6302 6025 1669 191 22 38 chr20 1618902 1619268 -70534614 - L1MA9 LINE L1 -38 6274 5915 * 1758 183 3 30 chr20 1619267 1619605 -70534277 + L1MA9 LINE L1 5594 5922 -390 995 242 34 18 chr20 1619565 1619892 -70533990 - L1MC5 LINE L1 -178 7783 7452 * 386 241 23 0 chr20 1619929 1620016 -70533866 + LTR16C LTR ERVL 282 370 -121 23 0 0 0 chr20 1620209 1620232 -70533650 + AT_rich Low_complexity Low_complexity 1 23 0 2499 40 0 10 chr20 1620387 1620683 -70533199 + AluY SINE Alu 1 293 -18 477 0 0 0 chr20 1620683 1620736 -70533146 + (CA)n Simple_repeat Simple_repeat 2 54 0 1804 277 95 8 chr20 1620766 1621395 -70532487 - L1MC4a LINE L1 -1866 6011 5328 740 219 10 86 chr20 1621561 1621853 -70532029 - L1MC4a LINE L1 -1094 5121 4852 25 0 0 0 chr20 1621860 1621885 -70531997 + AT_rich Low_complexity Low_complexity 1 25 0 1336 27 0 0 chr20 1621885 1622033 -70531849 - L1PA4 LINE L1 -3 6152 6005 317 158 18 0 chr20 1622037 1622094 -70531788 - L1MC4a LINE L1 -1353 4862 4805 4500 233 61 45 chr20 1622096 1622837 -70531045 - L1MEc LINE L1 -2426 3789 3061 1895 154 0 3 chr20 1622837 1623122 -70530760 + AluJb SINE Alu 1 284 -28 180 97 0 0 chr20 1623122 1623153 -70530729 + (CATA)n Simple_repeat Simple_repeat 2 32 0 4500 233 61 45 chr20 1623153 1624561 -70529321 - L1MEc LINE L1 -3153 3062 1639 656 108 30 175 chr20 1624571 1624737 -70529145 - L1MB3 LINE L1 -7 6176 6035 575 202 29 0 chr20 1624740 1624844 -70529038 - U6 snRNA snRNA 0 107 1 239 176 39 0 chr20 1624847 1624898 -70528984 + Alu SINE Alu 246 298 -2 3945 251 71 56 chr20 1624901 1625002 -70528880 - L1MEc LINE L1 -1710 4505 4407 2217 123 0 0 chr20 1625002 1625303 -70528579 + AluSq SINE Alu 1 301 -12 3945 251 71 56 chr20 1625303 1625623 -70528259 - L1MEc LINE L1 -1808 4407 4093 2381 70 0 10 chr20 1625623 1625923 -70527959 - AluY SINE Alu -14 297 1 3945 251 71 56 chr20 1625923 1627407 -70526475 - L1MEc LINE L1 -2122 4093 11 283 353 8 16 chr20 1627425 1627547 -70526335 - HAL1 LINE L1 -569 1938 1818 417 287 27 27 chr20 1627656 1627844 -70526038 - HAL1 LINE L1 -900 1607 1420 615 219 7 171 chr20 1628332 1628515 -70525367 - MIR SINE MIR -26 236 111 1907 138 10 17 chr20 1628515 1628811 -70525071 + AluSx SINE Alu 1 294 -18 615 219 7 171 chr20 1628811 1628901 -70524981 - MIR SINE MIR -151 111 8 23 0 0 0 chr20 1630135 1630158 -70523724 + AT_rich Low_complexity Low_complexity 1 23 0 406 277 7 29 chr20 1630185 1630325 -70523557 + L1ME4a LINE L1 5437 5576 -545 522 256 47 33 chr20 1630574 1630789 -70523093 + L1ME4a LINE L1 5609 5826 -295 233 305 44 66 chr20 1630940 1631018 -70522864 + MIR SINE MIR 2 80 -182 2458 142 66 22 chr20 1631018 1631428 -70522454 + MSTC LTR MaLR 1 428 0 233 305 44 66 chr20 1631428 1631575 -70522307 + MIR SINE MIR 80 222 -40 666 280 0 66 chr20 1631889 1632132 -70521750 - MIR SINE MIR -29 233 7 254 28 0 28 chr20 1632355 1632391 -70521491 + (TCTA)n Simple_repeat Simple_repeat 4 38 0 1598 247 104 41 chr20 1634113 1634668 -70519214 + MLT1G1 LTR MaLR 3 592 -3 1304 286 46 8 chr20 1634722 1635243 -70518639 - L1M4 LINE L1 -3049 3097 2557 1835 226 85 20 chr20 1635249 1635765 -70518117 + MLT1F1 LTR MaLR 1 567 0 777 250 48 20 chr20 1635795 1636043 -70517839 + MLT1D LTR MaLR 207 461 -44 925 185 20 89 chr20 1636043 1636335 -70517547 - L1MB8 LINE L1 -13 6976 6705 * 31144 101 9 10 chr20 1636329 1642024 -70511858 - L1PA7 LINE L1 -4 6465 748 5495 205 58 34 chr20 1642024 1643111 -70510771 - L1MB8 LINE L1 -276 6719 5660 836 161 0 0 chr20 1643111 1643241 -70510641 - FLAM_C SINE Alu -3 130 1 5495 205 58 34 chr20 1643241 1644541 -70509341 - L1MB8 LINE L1 -1335 5660 4055 1531 229 48 66 chr20 1644560 1645290 -70508592 - L1MB8 LINE L1 -4936 1919 1203 682 246 126 0 chr20 1645291 1645482 -70508400 - L1MB8 LINE L1 -6629 230 16 293 227 0 0 chr20 1645495 1645561 -70508321 + MLT1D LTR MaLR 440 505 0 193 208 56 69 chr20 1645809 1645881 -70508001 + MIR3 SINE MIR 87 157 -51 224 264 240 23 chr20 1646445 1646574 -70507308 + MIR SINE MIR 106 262 0 195 328 153 8 chr20 1647179 1647310 -70506572 + MIR SINE MIR 100 249 -13 26 64 0 0 chr20 1650230 1650277 -70503605 + AT_rich Low_complexity Low_complexity 1 47 0 1099 218 21 0 chr20 1650478 1650712 -70503170 + MER106B DNA MER1_type 1 239 -820 2952 116 50 84 chr20 1650717 1651312 -70502570 + L1MA7 LINE L1 5711 6285 -6 2107 215 151 15 chr20 1651418 1651940 -70501942 - MLT1E LTR MaLR 0 593 1 879 182 27 27 chr20 1651940 1652157 -70501725 + MER106B DNA MER1_type 769 985 -74 1955 201 58 14 chr20 1652158 1652590 -70501292 + MLT1C LTR MaLR 1 451 -16 2100 137 0 9 chr20 1652655 1652970 -70500912 + AluJb SINE Alu 1 312 0 191 354 0 25 chr20 1654692 1654771 -70499111 + MIR SINE MIR 20 96 -166 * 251 314 21 57 chr20 1654770 1654840 -70499042 + L2 LINE L2 2263 2334 -980 2377 99 0 0 chr20 1654840 1655134 -70498748 - AluSq SINE Alu -19 294 1 251 314 21 57 chr20 1655134 1655257 -70498625 + L2 LINE L2 2334 2449 -865 677 160 65 53 chr20 1655290 1655459 -70498423 - LTR45B LTR ERV1 0 489 319 225 282 0 14 chr20 1655529 1655600 -70498282 - MER72 LTR ERV1 -243 479 410 262 337 128 8 chr20 1655814 1656063 -70497819 + L2 LINE L2 2480 2758 -556 1414 267 31 24 chr20 1656162 1656544 -70497338 - LTR16A LTR ERVL 0 450 66 315 98 0 20 chr20 1656951 1657002 -70496880 - L1MC2 LINE L1 -12 6332 6283 4676 153 18 31 chr20 1657002 1657869 -70496013 - L1MC3 LINE L1 -99 7686 6831 262 235 73 0 chr20 1658043 1658111 -70495771 - L2 LINE L2 0 3313 3241 4714 199 47 32 chr20 1658179 1658896 -70494986 + Tigger6a DNA MER2_type 1 706 -891 2317 117 3 0 chr20 1658896 1659204 -70494678 + AluSp SINE Alu 1 309 -4 4714 199 47 32 chr20 1659204 1659228 -70494654 + Tigger6a DNA MER2_type 706 728 -869 1864 131 109 68 chr20 1659228 1659639 -70494243 - MSTA LTR MaLR 0 428 1 4714 199 47 32 chr20 1659639 1659963 -70493919 + Tigger6a DNA MER2_type 728 1083 0 376 288 24 29 chr20 1659986 1660156 -70493726 - L2 LINE L2 -177 3136 2968 256 146 83 0 chr20 1660156 1660204 -70493678 - L2 LINE L2 -580 2734 2683 312 246 14 0 chr20 1660316 1660385 -70493497 - MER63 DNA MER1_type -14 1047 978 534 191 17 26 chr20 1660386 1660501 -70493381 - MER63 DNA MER1_type -311 751 12 183 261 0 0 chr20 1661246 1661292 -70492590 - L2 LINE L2 -6 3266 3221 311 152 139 0 chr20 1662233 1662312 -70491570 - MIR SINE MIR -70 192 103 30 0 0 0 chr20 1662769 1662799 -70491083 + AT_rich Low_complexity Low_complexity 1 30 0 462 313 59 28 chr20 1662860 1663215 -70490667 + LTR16A LTR ERVL 71 436 -14 566 323 98 26 chr20 1663226 1663755 -70490127 + HERV16 LTR ERVL 11 577 -4419 477 276 86 0 chr20 1664167 1664330 -70489552 + L1MDb LINE L1 4 180 -6229 1097 262 34 44 chr20 1664395 1664959 -70488923 + L1M4 LINE L1 3027 3584 -2562 204 283 0 0 chr20 1666982 1667035 -70486847 + MIR SINE MIR 204 256 -6 337 316 59 0 chr20 1667818 1667970 -70485912 - MIR SINE MIR -74 188 28 202 133 0 0 chr20 1669527 1669557 -70484325 + L2 LINE L2 3266 3295 -18 414 249 24 71 chr20 1670109 1670278 -70483604 + MER5B DNA MER1_type 18 178 0 491 315 65 9 chr20 1670357 1670589 -70483293 - MIR SINE MIR -4 258 14 209 216 93 31 chr20 1670656 1670753 -70483129 - MIR SINE MIR -77 185 83 249 241 147 23 chr20 1671538 1671697 -70482185 + MIR3 SINE MIR 12 183 -62 545 245 172 5 chr20 1672058 1672262 -70481620 - MLT1D LTR MaLR -125 380 143 1199 110 18 0 chr20 1672309 1672473 -70481409 + AluSp SINE Alu 1 167 -146 852 244 102 11 chr20 1672491 1672765 -70481117 + L1MC4a LINE L1 5567 5865 -1943 516 242 47 0 chr20 1672991 1673140 -70480742 + MIR3 SINE MIR 45 200 -8 375 278 9 0 chr20 1673523 1673638 -70480244 + L2 LINE L2 3193 3308 -5 367 227 118 0 chr20 1674483 1674593 -70479289 - MIR SINE MIR -38 224 102 1819 176 0 13 chr20 1674630 1674936 -70478946 - AluJb SINE Alu -10 302 1 530 258 111 29 chr20 1675040 1675319 -70478563 + MLT1I LTR MaLR 53 354 -55 538 165 61 0 chr20 1675354 1675469 -70478413 - MLT1D LTR MaLR -6 499 378 745 253 49 67 chr20 1675480 1675824 -70478058 + L1MA9 LINE L1 5939 6276 -36 281 197 154 124 chr20 1675824 1676058 -70477824 - MLT1D LTR MaLR -123 382 142 2888 245 25 27 chr20 1676058 1676955 -70476927 + L1M4c LINE L1 908 1802 -4582 2017 178 93 5 chr20 1676982 1677369 -70476513 - MER88 LTR ERVL -35 429 9 822 201 23 48 chr20 1677599 1677988 -70475894 + HERVL74 LTR ERVL 1997 2450 -3235 507 184 16 48 chr20 1677992 1678117 -70475765 + HERVL74 LTR ERVL 3530 3650 -2035 367 154 26 26 chr20 1678107 1678185 -70475697 + HERVL74 LTR ERVL 3907 3984 -1701 * 990 249 21 7 chr20 1678187 1678468 -70475414 + L1 LINE L1 3724 4008 -2138 323 272 60 60 chr20 1678485 1678669 -70475213 + L2 LINE L2 3130 3313 0 345 273 157 2 chr20 1678925 1679052 -70474830 + MIR SINE MIR 12 156 -52 444 82 0 0 chr20 1679533 1679594 -70474288 + (CTA)n Simple_repeat Simple_repeat 2 62 0 7389 185 27 10 chr20 1679605 1682042 -70471840 + L1MA8 LINE L1 3790 6260 -31 2310 111 0 40 chr20 1682164 1682515 -70471367 + MER1B DNA MER1_type 1 337 0 570 312 34 13 chr20 1682724 1682958 -70470924 + MIR SINE MIR 7 245 -17 2137 158 21 10 chr20 1683258 1683644 -70470238 + MLT1B LTR MaLR 1 390 0 255 281 16 55 chr20 1685558 1685686 -70468196 + MIR SINE MIR 65 187 -75 462 305 0 28 chr20 1686106 1686283 -70467599 - MIR SINE MIR -12 250 79 1810 130 53 56 chr20 1687517 1687850 -70466032 + THE1C LTR MaLR 1 335 -40 2232 99 3 0 chr20 1687850 1688164 -70465718 - AluSx SINE Alu 0 315 1 1810 130 53 56 chr20 1688164 1688205 -70465677 + THE1C LTR MaLR 335 375 0 2206 93 7 0 chr20 1689607 1689911 -70463971 + AluSp SINE Alu 1 306 0 730 274 20 5 chr20 1690317 1690514 -70463368 + MIR SINE MIR 28 227 -35 1683 216 92 0 chr20 1691535 1691924 -70461958 + L1MCa LINE L1 73 497 -5929 1106 229 107 7 chr20 1691924 1692234 -70461648 + Tigger6 DNA MER2_type 1255 1595 -2 185 292 62 0 chr20 1692461 1692574 -70461308 - L2 LINE L2 -661 2653 2534 546 250 48 36 chr20 1692582 1692750 -70461132 - MER63A DNA MER1_type -5 205 36 1933 177 110 3 chr20 1692978 1693368 -70460514 - MSTB1 LTR MaLR 0 432 1 308 200 125 0 chr20 1694897 1694977 -70458905 - MIR SINE MIR -70 192 103 1485 215 122 54 chr20 1695128 1695700 -70458182 + LTR36 LTR ERV1 1 611 0 577 312 60 23 chr20 1696105 1696458 -70457424 + LTR16A LTR ERVL 67 432 -18 462 292 36 18 chr20 1696472 1696640 -70457242 + HERV16 LTR ERVL 11 181 -4815 559 326 52 16 chr20 1696703 1697013 -70456869 + HERV16 LTR ERVL 274 594 -4402 594 241 42 12 chr20 1697405 1697571 -70456311 + L1MDb LINE L1 2 172 -6237 1150 287 24 20 chr20 1697646 1698197 -70455685 + L1M4 LINE L1 3028 3580 -2566 26 74 0 0 chr20 1698273 1698327 -70455555 + AT_rich Low_complexity Low_complexity 1 54 0 223 276 35 0 chr20 1698700 1698758 -70455124 + MER91 DNA MER1_type 131 190 0 202 133 0 0 chr20 1702555 1702585 -70451297 + L2 LINE L2 3266 3295 -18 414 249 24 71 chr20 1703136 1703305 -70450577 + MER5B DNA MER1_type 18 178 0 491 315 65 9 chr20 1703384 1703616 -70450266 - MIR SINE MIR -4 258 14 209 216 93 31 chr20 1703683 1703780 -70450102 - MIR SINE MIR -77 185 83 249 241 147 23 chr20 1704565 1704724 -70449158 + MIR3 SINE MIR 12 183 -62 507 241 177 5 chr20 1705085 1705288 -70448594 - MLT1D LTR MaLR -125 380 143 1100 146 18 0 chr20 1705335 1705499 -70448383 + AluSp SINE Alu 1 167 -146 727 275 99 4 chr20 1705517 1705790 -70448092 + L1MC4a LINE L1 5567 5865 -1943 570 221 47 0 chr20 1706016 1706165 -70447717 + MIR3 SINE MIR 45 200 -8 392 278 9 0 chr20 1706541 1706656 -70447226 + L2 LINE L2 3193 3308 -5 201 203 156 0 chr20 1706718 1706782 -70447100 + MIR3 SINE MIR 85 158 -50 24 32 0 0 chr20 1757607 1757638 -70396244 + AT_rich Low_complexity Low_complexity 1 31 0 396 174 49 125 chr20 1759648 1759792 -70394090 - AluJo SINE Alu -168 134 2 322 161 0 0 chr20 1759868 1759924 -70393958 - Charlie5 DNA MER1_type 0 2624 2569 585 271 181 46 chr20 1760099 1760708 -70393174 + L2 LINE L2 2614 3313 0 300 301 7 44 chr20 1760721 1760857 -70393025 - L2 LINE L2 -3 3310 3180 2181 98 3 0 chr20 1760989 1761286 -70392596 - AluSg SINE Alu -12 298 1 198 176 0 0 chr20 1761735 1761769 -70392113 + L2 LINE L2 3028 3061 -211 399 98 0 0 chr20 1761827 1761888 -70391994 + (TCCA)n Simple_repeat Simple_repeat 1 61 0 291 298 38 38 chr20 1761912 1762043 -70391839 - L2 LINE L2 -68 3245 3115 479 191 9 57 chr20 1762084 1762189 -70391693 + MER3 DNA MER1_type 29 128 -81 230 254 0 18 chr20 1762560 1762615 -70391267 + (TG)n Simple_repeat Simple_repeat 1 54 0 277 291 150 32 chr20 1763221 1763441 -70390441 - L2 LINE L2 -21 3292 3047 201 259 24 59 chr20 1764209 1764294 -70389588 - MIR3 SINE MIR -21 187 106 257 135 19 0 chr20 1764526 1764578 -70389304 + GA-rich Low_complexity Low_complexity 2 54 0 452 259 30 30 chr20 1764619 1764754 -70389128 + MIR SINE MIR 20 154 -108 209 398 31 8 chr20 1764946 1765074 -70388808 + L2 LINE L2 3164 3294 -19 * 264 275 144 64 chr20 1765063 1765299 -70388583 + L3 LINE CR1 1210 1464 -113 1139 276 109 35 chr20 1765395 1766073 -70387809 + L2 LINE L2 2334 3059 -213 728 256 56 40 chr20 1766766 1767016 -70386866 + MIR SINE MIR 9 262 0 475 270 81 0 chr20 1767092 1767203 -70386679 - L2 LINE L2 -2 3311 3192 302 262 47 37 chr20 1767218 1767325 -70386557 - L1MC4 LINE L1 -13 8029 7922 259 167 14 28 chr20 1768295 1768367 -70385515 + CT-rich Low_complexity Low_complexity 6 76 0 352 96 72 36 chr20 1768414 1768497 -70385385 - L1PA13 LINE L1 -4 6159 6074 1486 143 22 0 chr20 1768499 1768817 -70385065 - L1P4 LINE L1 -669 5496 5173 197 295 13 51 chr20 1770006 1770084 -70383798 - MIR SINE MIR -168 94 20 2081 113 7 0 chr20 1770427 1770719 -70383163 - AluSq SINE Alu -19 294 1 366 251 95 56 chr20 1770974 1771140 -70382742 + MIR SINE MIR 16 184 -68 5429 90 5 31 chr20 1771229 1772004 -70381878 + L1PA10 LINE L1 5413 6167 -1 391 244 148 17 chr20 1772147 1772262 -70381620 - MIR SINE MIR -117 145 16 831 208 35 0 chr20 1772357 1772530 -70381352 + MIR SINE MIR 17 195 -67 472 258 12 78 chr20 1773160 1773327 -70380555 + MIR SINE MIR 107 262 0 326 287 139 0 chr20 1773874 1773982 -70379900 - MIR SINE MIR -69 139 17 * 351 301 9 26 chr20 1773947 1774060 -70379822 + MIR SINE MIR 46 156 -106 402 295 59 31 chr20 1774265 1774519 -70379363 - LTR16C LTR ERVL 0 491 231 30 69 0 0 chr20 1775150 1775208 -70378674 + AT_rich Low_complexity Low_complexity 1 58 0 213 314 14 0 chr20 1775325 1775395 -70378487 + MIR SINE MIR 154 224 -38 305 286 11 33 chr20 1775971 1776062 -70377820 - MIR SINE MIR -95 113 25 270 278 100 0 chr20 1776289 1776379 -70377503 + MIR SINE MIR 43 141 -121 1038 88 0 0 chr20 1776554 1776701 -70377181 + (TCCA)n Simple_repeat Simple_repeat 1 147 0 181 313 31 0 chr20 1777293 1777357 -70376525 + L3 LINE CR1 1508 1573 -4 414 273 75 0 chr20 1777645 1777806 -70376076 + MIR SINE MIR 90 262 0 280 262 33 66 chr20 1777847 1777969 -70375913 + MIR SINE MIR 74 191 -71 348 283 106 0 chr20 1778855 1778968 -70374914 + L2 LINE L2 3189 3313 0 302 304 64 21 chr20 1779639 1779919 -70373963 - L1ME3A LINE L1 -214 5956 5665 312 27 0 0 chr20 1780055 1780092 -70373790 + (TA)n Simple_repeat Simple_repeat 1 37 0 227 154 77 0 chr20 1780092 1780144 -70373738 - L1MC4 LINE L1 -1339 6703 6648 5376 184 30 2 chr20 1780634 1782517 -70371365 + L1MA8 LINE L1 4358 6291 0 270 303 0 0 chr20 1782588 1782654 -70371228 + (CATA)n Simple_repeat Simple_repeat 3 68 0 303 180 0 66 chr20 1782659 1782720 -70371162 - L1MC4 LINE L1 -1337 6705 6649 694 261 46 42 chr20 1783005 1783243 -70370639 + MIR SINE MIR 7 245 -17 2225 145 18 8 chr20 1783567 1783953 -70369929 + MLT1B LTR MaLR 1 390 0 221 299 77 8 chr20 1785515 1785632 -70368250 + MIR SINE MIR 91 215 -47 326 343 36 0 chr20 1785861 1786001 -70367881 + MIR SINE MIR 56 200 -62 455 297 84 21 chr20 1786426 1786626 -70367256 - MIR SINE MIR -14 248 36 335 309 44 37 chr20 1786878 1787014 -70366868 + HAL1 LINE L1 881 1017 -1490 2136 161 71 27 chr20 1787138 1787548 -70366334 - MSTA LTR MaLR 0 428 1 8311 172 51 22 chr20 1787566 1788754 -70365128 - MSTA-int LTR MaLR -18 1633 386 1860 130 0 57 chr20 1788754 1789070 -70364812 - AluSg SINE Alu -12 298 1 8311 172 51 22 chr20 1789070 1789467 -70364415 - MSTA-int LTR MaLR -1265 386 2 2379 149 67 5 chr20 1789468 1789871 -70364011 - MSTA LTR MaLR 0 428 1 578 306 78 4 chr20 1790527 1790769 -70363113 + MIR SINE MIR 3 262 0 3308 171 46 5 chr20 1791713 1792322 -70361560 + L1MCa LINE L1 73 706 -5720 3095 236 30 7 chr20 1792329 1793074 -70360808 + Tigger6a DNA MER2_type 322 1083 0 405 296 23 28 chr20 1793091 1793267 -70360615 - L2 LINE L2 -171 3142 2968 261 243 322 0 chr20 1793267 1793419 -70360463 - L2 LINE L2 -580 2734 2534 608 257 50 35 chr20 1793422 1793624 -70360258 - MER63A DNA MER1_type 0 210 6 251 265 112 10 chr20 1795279 1795377 -70358505 - MIR SINE MIR -70 192 85 229 282 39 48 chr20 1795646 1795749 -70358133 - L3 LINE CR1 -4 1573 1472 21 0 0 0 chr20 1795863 1795884 -70357998 + AT_rich Low_complexity Low_complexity 1 21 0 604 307 48 40 chr20 1795931 1796309 -70357573 + LTR16A LTR ERVL 64 444 -6 681 331 96 23 chr20 1796334 1796856 -70357026 + HERV16 LTR ERVL 37 596 -4400 362 290 19 13 chr20 1797294 1797449 -70356433 + L1MDb LINE L1 53 208 -6201 1117 275 38 22 chr20 1797485 1798034 -70355848 + L1M4 LINE L1 3027 3584 -2562 2404 41 7 3 chr20 1798904 1799199 -70354683 - AluY SINE Alu -13 298 3 2528 31 0 0 chr20 1799457 1799751 -70354131 + AluY SINE Alu 2 295 -16 218 171 0 0 chr20 1800460 1800495 -70353387 + L2 LINE L2 3255 3289 -24 197 300 0 0 chr20 1800463 1800513 -70353369 + MIR SINE MIR 213 262 0 * 192 167 0 167 chr20 1800594 1800666 -70353216 + L2 LINE L2 3253 3312 -1 389 292 115 21 chr20 1801260 1801452 -70352430 - MIR SINE MIR -32 230 21 192 281 62 31 chr20 1801675 1801739 -70352143 + MIR SINE MIR 127 192 -70 189 270 0 0 chr20 1803000 1803037 -70350845 + L2 LINE L2 3258 3294 -19 27640 134 14 12 chr20 1803297 1809696 -70344186 - L1PA8 LINE L1 0 6487 4 556 250 24 55 chr20 1809997 1810161 -70343721 + MER5B DNA MER1_type 18 176 -2 772 290 63 8 chr20 1810242 1810480 -70343402 - MIR SINE MIR -4 258 8 303 274 62 26 chr20 1810542 1810655 -70343227 - MIR SINE MIR -78 184 68 247 263 105 44 chr20 1810678 1810792 -70343090 - MIR SINE MIR -44 218 98 2178 86 3 7 chr20 1811328 1811641 -70342241 - AluSp SINE Alu 0 313 1 258 247 27 14 chr20 1811825 1811898 -70341984 + MIR SINE MIR 108 181 -81 687 291 102 4 chr20 1812180 1812445 -70341437 + L1MC4a LINE L1 5567 5857 -1951 444 276 32 73 chr20 1812665 1812829 -70341053 + MIR3 SINE MIR 41 200 -8 402 288 0 9 chr20 1813204 1813315 -70340567 + L2 LINE L2 3193 3302 -11 227 93 23 0 chr20 1813321 1813364 -70340518 + (TAAAA)n Simple_repeat Simple_repeat 1 44 0 272 210 129 0 chr20 1813430 1813492 -70340390 + MIR3 SINE MIR 91 160 -48 283 338 29 29 chr20 1813496 1813632 -70340250 + MIR SINE MIR 20 155 -107 381 205 71 18 chr20 1814209 1814321 -70339561 - MIR SINE MIR -37 225 108 1425 214 20 0 chr20 1814321 1814625 -70339257 - AluJb SINE Alu -2 310 1 343 269 86 0 chr20 1814695 1814788 -70339094 - L1MC4 LINE L1 -1342 6700 6600 406 241 151 6 chr20 1814813 1814979 -70338903 - MLT1D LTR MaLR -174 331 142 3042 233 24 31 chr20 1814991 1815880 -70338002 + L1M4c LINE L1 921 1802 -4582 1671 194 19 24 chr20 1815888 1816303 -70337579 - MER88 LTR ERVL -5 459 2 230 254 0 18 chr20 1816464 1816519 -70337363 + (TG)n Simple_repeat Simple_repeat 1 54 0 277 291 150 32 chr20 1817126 1817346 -70336536 - L2 LINE L2 -21 3292 3047 201 259 24 59 chr20 1818114 1818199 -70335683 - MIR3 SINE MIR -21 187 106 257 135 19 0 chr20 1818431 1818483 -70335399 + GA-rich Low_complexity Low_complexity 2 54 0 442 267 30 30 chr20 1818523 1818658 -70335224 + MIR SINE MIR 20 154 -108 209 398 31 8 chr20 1818850 1818978 -70334904 + L2 LINE L2 3164 3294 -19 * 264 275 144 64 chr20 1818967 1819203 -70334679 + L3 LINE CR1 1210 1464 -113 1139 276 109 35 chr20 1819300 1819978 -70333904 + L2 LINE L2 2334 3059 -213 728 256 56 40 chr20 1820671 1820921 -70332961 + MIR SINE MIR 9 262 0 475 270 81 0 chr20 1820997 1821108 -70332774 - L2 LINE L2 -2 3311 3192 302 262 47 37 chr20 1821123 1821230 -70332652 - L1MC4 LINE L1 -13 8029 7922 259 167 14 28 chr20 1822200 1822272 -70331610 + CT-rich Low_complexity Low_complexity 6 76 0 352 96 72 36 chr20 1822319 1822402 -70331480 - L1PA13 LINE L1 -4 6159 6074 1486 143 22 0 chr20 1822404 1822722 -70331160 - L1P4 LINE L1 -669 5496 5173 197 295 13 51 chr20 1823874 1823952 -70329930 - MIR SINE MIR -168 94 20 2081 113 7 0 chr20 1824295 1824587 -70329295 - AluSq SINE Alu -19 294 1 366 251 95 56 chr20 1824842 1825008 -70328874 + MIR SINE MIR 16 184 -68 5429 90 5 31 chr20 1825097 1825872 -70328010 + L1PA10 LINE L1 5413 6167 -1 391 244 148 17 chr20 1826015 1826130 -70327752 - MIR SINE MIR -117 145 16 831 208 35 0 chr20 1826225 1826398 -70327484 + MIR SINE MIR 17 195 -67 472 258 12 78 chr20 1827028 1827195 -70326687 + MIR SINE MIR 107 262 0 326 287 139 0 chr20 1827742 1827850 -70326032 - MIR SINE MIR -69 139 17 * 351 301 9 26 chr20 1827815 1827928 -70325954 + MIR SINE MIR 46 156 -106 439 298 55 31 chr20 1828133 1828388 -70325494 - LTR16C LTR ERVL 0 491 231 30 69 0 0 chr20 1829019 1829077 -70324805 + AT_rich Low_complexity Low_complexity 1 58 0 213 314 14 0 chr20 1829194 1829264 -70324618 + MIR SINE MIR 154 224 -38 305 286 11 33 chr20 1829840 1829931 -70323951 - MIR SINE MIR -95 113 25 270 278 100 0 chr20 1830158 1830248 -70323634 + MIR SINE MIR 43 141 -121 1038 88 0 0 chr20 1830423 1830570 -70323312 + (TCCA)n Simple_repeat Simple_repeat 1 147 0 181 313 31 0 chr20 1831162 1831226 -70322656 + L3 LINE CR1 1508 1573 -4 416 246 26 0 chr20 1831514 1831628 -70322254 + MIR SINE MIR 90 206 -56 261 262 33 66 chr20 1831716 1831838 -70322044 + MIR SINE MIR 74 191 -71 329 303 40 0 chr20 1832738 1832837 -70321045 + L2 LINE L2 3211 3313 0 327 301 60 23 chr20 1833508 1833774 -70320108 - L1ME3A LINE L1 -214 5956 5681 1038 148 0 0 chr20 1833924 1834100 -70319782 + (TA)n Simple_repeat Simple_repeat 1 176 0 349 231 0 22 chr20 1834100 1834206 -70319676 - L1MCa LINE L1 -1339 6983 1996 311 169 46 0 chr20 1834188 1834253 -70319629 - L1MCa LINE L1 -4363 2063 1996 * 861 256 60 34 chr20 1834360 1834711 -70319171 + L1MEc LINE L1 1650 2009 -4387 302 149 95 25 chr20 1834834 1834913 -70318969 + L1 LINE L1 5000 5083 -1063 1049 142 0 7 chr20 1834913 1835068 -70318814 - AluSg/x SINE Alu -30 282 129 4142 139 38 17 chr20 1835301 1835993 -70317889 + Tigger1 DNA MER2_type 18 723 -1695 613 269 114 35 chr20 1836030 1836520 -70317362 - L1M4 LINE L1 -1393 4753 4225 1987 121 80 0 chr20 1836525 1836814 -70317068 - AluSx SINE Alu 0 312 1 781 261 65 50 chr20 1836860 1837243 -70316639 - HAL1 LINE L1 -1 2506 2118 2287 118 0 0 chr20 1837245 1837550 -70316332 - AluSx SINE Alu -7 305 1 3474 194 45 30 chr20 1837611 1838388 -70315494 - L1MD2 LINE L1 -249 6905 6117 3126 192 79 5 chr20 1838388 1839119 -70314763 + MER21B LTR ERV1 1 863 0 3813 216 56 53 chr20 1839119 1839932 -70313950 - L1MD2 LINE L1 -814 6127 5317 3512 138 0 77 chr20 1839932 1840532 -70313350 + MLT2B3 LTR ERVL 1 554 0 3813 216 56 53 chr20 1840532 1840714 -70313168 - L1MD2 LINE L1 -1624 5317 5137 2090 133 0 0 chr20 1840714 1841007 -70312875 + AluSx SINE Alu 1 293 -19 3813 216 56 53 chr20 1841007 1841244 -70312638 - L1MD2 LINE L1 -1804 5137 4891 2445 74 0 7 chr20 1843484 1843783 -70310099 + AluY SINE Alu 1 297 -14 205 237 34 17 chr20 1844184 1844243 -70309639 - MIR3 SINE MIR -19 189 130 448 184 46 55 chr20 1844767 1844876 -70309006 - L1MD2 LINE L1 -2040 4901 4794 11040 151 26 12 chr20 1844887 1846749 -70307133 - L1MA5 LINE L1 -6 6294 4367 234 0 0 0 chr20 1846749 1846775 -70307107 + (TTTTA)n Simple_repeat Simple_repeat 2 27 0 11040 151 26 12 chr20 1846775 1847868 -70306014 - L1MA5 LINE L1 -1933 4367 3291 923 213 0 10 chr20 1847870 1848072 -70305810 - L1 LINE L1 -1185 6023 5824 * 1603 176 13 3 chr20 1848062 1848561 -70305321 - L1 LINE L1 -3750 3458 2955 2070 221 5 0 chr20 1848563 1848956 -70304926 - L1 LINE L1 -6814 395 1 612 263 16 10 chr20 1848977 1849171 -70304711 - L1MD2 LINE L1 -2135 4806 4612 550 210 25 68 chr20 1849171 1849217 -70304665 - L1MD2 LINE L1 -3023 3918 3872 2066 138 21 0 chr20 1849217 1849508 -70304374 - AluSx SINE Alu -15 297 1 550 210 25 68 chr20 1849508 1849623 -70304259 - L1MD2 LINE L1 -3069 3872 3764 231 36 0 0 chr20 1849640 1849668 -70304214 + (TG)n Simple_repeat Simple_repeat 2 29 0 783 203 131 16 chr20 1849718 1850029 -70303853 - L1MC/D LINE L1 -492 5686 5412 427 33 33 0 chr20 1850029 1850090 -70303792 + (TCTA)n Simple_repeat Simple_repeat 4 66 0 783 203 131 16 chr20 1850090 1850490 -70303392 - L1MC/D LINE L1 -766 5412 4735 * 2478 161 13 12 chr20 1850486 1851225 -70302657 - L1P4 LINE L1 -505 5660 4924 1029 243 82 57 chr20 1851230 1851633 -70302249 - L1MD2 LINE L1 -5190 1233 821 967 345 50 23 chr20 1851725 1852291 -70301591 - L1MD2 LINE L1 -5826 597 17 718 282 50 0 chr20 1852294 1852496 -70301386 - L2 LINE L2 -772 2542 2331 485 190 0 0 chr20 1853704 1853783 -70300099 + AluJ/FRAM SINE Alu 218 296 -16 1549 231 61 20 chr20 1853987 1854428 -70299454 - L1ME2 LINE L1 -8 6156 5698 22 0 0 0 chr20 1855156 1855178 -70298704 + AT_rich Low_complexity Low_complexity 1 22 0 17925 28 2 0 chr20 1855178 1857942 -70295940 - L1PA2 LINE L1 0 6155 3387 765 183 13 12 chr20 1858457 1858696 -70295186 + GA-rich Low_complexity Low_complexity 1 239 0 246 191 0 0 chr20 1860421 1860468 -70293414 + MER94 DNA DNA 77 123 -11 306 314 39 0 chr20 1860752 1860854 -70293028 - MIR SINE MIR -66 196 91 2095 118 41 54 chr20 1861217 1861553 -70292329 - MSTB1 LTR MaLR -47 385 53 2627 115 25 3 chr20 1861553 1861909 -70291973 - THE1B LTR MaLR 0 364 1 2095 118 41 54 chr20 1861909 1861962 -70291920 - MSTB1 LTR MaLR -379 53 1 343 286 62 36 chr20 1861981 1862173 -70291709 + L1ME LINE L1 5367 5563 -599 2228 106 7 0 chr20 1862332 1862616 -70291266 - AluSx SINE Alu -21 291 6 1246 192 5 5 chr20 1862977 1863201 -70290681 - AluJo SINE Alu -37 275 52 2191 105 9 22 chr20 1863241 1863556 -70290326 + AluY SINE Alu 1 311 0 305 290 140 0 chr20 1863659 1863759 -70290123 - L2 LINE L2 -6 3307 3194 195 333 25 25 chr20 1864117 1864198 -70289684 + L2 LINE L2 3211 3291 -22 734 213 0 0 chr20 1864547 1864674 -70289208 - FLAM_A SINE Alu -5 128 2 216 0 0 0 chr20 1864689 1864713 -70289169 + (CA)n Simple_repeat Simple_repeat 2 25 0 566 116 23 0 chr20 1864717 1864803 -70289079 - L1MC2 LINE L1 -5 6339 6252 663 90 117 9 chr20 1864803 1864914 -70288968 - L1MC1 LINE L1 -217 6116 5994 2163 136 0 0 chr20 1864940 1865250 -70288632 - AluSx SINE Alu -2 310 1 592 68 0 0 chr20 1865251 1865325 -70288557 + MSTA LTR MaLR 355 428 0 266 265 12 36 chr20 1865453 1865536 -70288346 - MER4B-int LTR ERV1 -6064 694 614 1480 217 51 58 chr20 1866091 1866525 -70287357 - LTR56 LTR ERV1 -2 443 13 2530 134 53 14 chr20 1866641 1867074 -70286808 + LTR7 LTR ERV1 1 450 0 9636 184 26 35 chr20 1867074 1870153 -70283729 + HERVH LTR ERV1 1 3245 -3409 2741 166 0 0 chr20 1870132 1870579 -70283303 + HERVH LTR ERV1 3140 3586 -4127 * 6298 131 7 3 chr20 1870578 1871739 -70282143 + HERVH LTR ERV1 3811 4910 -2287 1652 149 8 0 chr20 1871739 1872007 -70281875 + HERVH LTR ERV1 5747 6016 -1697 * 3807 100 11 16 chr20 1872000 1872560 -70281322 + HERVH LTR ERV1 7157 7713 0 2299 121 114 24 chr20 1872560 1872973 -70280909 + LTR7 LTR ERV1 1 450 0 255 61 0 0 chr20 1873075 1873108 -70280774 + (T)n Simple_repeat Simple_repeat 1 33 0 1180 181 0 35 chr20 1873283 1873509 -70280373 - AluJb SINE Alu -9 303 86 2232 157 28 0 chr20 1873899 1874255 -70279627 + MER47A DNA MER2_type 1 366 0 2354 217 22 0 chr20 1874757 1875204 -70278678 + MER88 LTR ERVL 1 457 -7 3634 213 23 36 chr20 1875216 1876077 -70277805 - L1M4c LINE L1 -4583 1801 951 2166 114 0 3 chr20 1876077 1876366 -70277516 - AluSq SINE Alu -25 288 1 3634 213 23 36 chr20 1876366 1876410 -70277472 - L1M4c LINE L1 -5433 951 908 509 235 141 6 chr20 1876410 1876580 -70277302 + MLT1D LTR MaLR 142 334 -171 886 270 55 21 chr20 1876614 1876944 -70276938 - L1MA9 LINE L1 -36 6276 5936 400 264 8 8 chr20 1876952 1877077 -70276805 + MLT1D LTR MaLR 378 502 -3 732 289 88 19 chr20 1877102 1877420 -70276462 - MLT1I LTR MaLR -49 360 21 322 313 97 0 chr20 1877486 1877630 -70276252 + MIR SINE MIR 102 259 -3 223 280 133 0 chr20 1878290 1878365 -70275517 - MIR3 SINE MIR -46 162 78 369 336 0 0 chr20 1878421 1878537 -70275345 - L2 LINE L2 -5 3308 3193 407 296 57 28 chr20 1878910 1879086 -70274796 - MIR3 SINE MIR -10 198 18 188 238 0 0 chr20 1879109 1879151 -70274731 + L2 LINE L2 3263 3304 -9 1958 134 0 0 chr20 1879254 1879565 -70274317 - AluSx SINE Alu 0 319 9 620 261 109 39 chr20 1879592 1879849 -70274033 - L1MC4a LINE L1 -1957 5851 5577 211 287 164 14 chr20 1880131 1880319 -70273563 - MIR SINE MIR -39 223 17 5251 90 24 1 chr20 1880629 1881305 -70272577 + LTR8 LTR ERV1 1 691 0 241 311 67 0 chr20 1881675 1881794 -70272088 + MIR SINE MIR 103 229 -33 260 330 50 0 chr20 1881820 1881920 -70271962 + MIR SINE MIR 80 184 -78 264 245 69 29 chr20 1881974 1882076 -70271806 + MIR SINE MIR 80 185 -77 368 289 22 15 chr20 1882136 1882271 -70271611 + MIR SINE MIR 7 142 -120 14301 192 30 14 chr20 1882280 1886714 -70267168 - L1PBb LINE L1 -913 5949 1446 4281 256 27 20 chr20 1886715 1888925 -70264957 - L1PBa LINE L1 -5219 1644 3 2592 112 16 0 chr20 1889559 1889926 -70263956 + THE1C LTR MaLR 1 373 -2 563 315 68 5 chr20 1889964 1890186 -70263696 + MIR SINE MIR 18 253 -9 23 0 0 0 chr20 1890250 1890273 -70263609 + AT_rich Low_complexity Low_complexity 1 23 0 280 319 43 0 chr20 1890607 1890745 -70263137 - MIR SINE MIR -62 200 57 182 218 127 0 chr20 1891073 1891128 -70262754 - MIR SINE MIR -110 152 91 1773 147 55 50 chr20 1892705 1892806 -70261076 - MLT1B LTR MaLR -8 382 283 2186 103 7 3 chr20 1892806 1893137 -70260745 - AluSx SINE Alu 0 312 1 1773 147 55 50 chr20 1893137 1893415 -70260467 - MLT1B LTR MaLR -107 283 1 331 320 66 17 chr20 1893723 1893904 -70259978 - MIR SINE MIR -17 245 56 1924 143 7 30 chr20 1894109 1894410 -70259472 + AluSx SINE Alu 1 294 -18 240 302 0 0 chr20 1894472 1894535 -70259347 + (TG)n Simple_repeat Simple_repeat 2 64 0 28 71 0 0 chr20 1894554 1894610 -70259272 + AT_rich Low_complexity Low_complexity 1 56 0 6852 190 42 4 chr20 1894632 1897025 -70256857 - L1MA8 LINE L1 -22 6269 3785 486 301 91 32 chr20 1897419 1897638 -70256244 - MIR SINE MIR 0 262 31 375 280 6 57 chr20 1897915 1898090 -70255792 - L2 LINE L2 0 3313 3148 975 209 45 8 chr20 1898106 1898374 -70255508 - L1M4 LINE L1 -2145 4237 3960 367 154 92 0 chr20 1898382 1898447 -70255435 - HERVL74 LTR ERVL -1714 3971 3901 565 149 18 26 chr20 1898448 1898562 -70255320 - HERVL74 LTR ERVL -2044 3641 3529 996 221 8 41 chr20 1898564 1898973 -70254909 - HERVL74 LTR ERVL -1564 1992 1906 2372 195 31 7 chr20 1899185 1899632 -70254250 + MER88 LTR ERVL 2 459 -5 766 81 0 0 chr20 1899643 1899742 -70254140 - AluSc SINE Alu -15 294 196 1787 110 0 4 chr20 1899747 1899983 -70253899 - AluSc SINE Alu -74 235 1 2985 241 43 30 chr20 1899985 1900870 -70253012 - L1M4 LINE L1 -4582 1802 907 968 271 69 10 chr20 1901024 1901124 -70252758 - L1MA9 LINE L1 -46 6266 6173 396 0 0 0 chr20 1901124 1901168 -70252714 + (TG)n Simple_repeat Simple_repeat 2 45 0 968 271 69 10 chr20 1901168 1901373 -70252509 - L1MA9 LINE L1 -139 6173 5943 616 180 25 0 chr20 1901383 1901505 -70252377 + MLT1D LTR MaLR 377 501 -4 676 262 110 38 chr20 1901532 1901799 -70252083 - MLT1I LTR MaLR -49 360 65 2500 75 3 0 chr20 1901799 1902105 -70251777 + AluSp SINE Alu 1 307 -6 676 262 110 38 chr20 1902105 1902154 -70251728 - MLT1I LTR MaLR -344 65 21 381 261 108 0 chr20 1902220 1902350 -70251532 + MIR SINE MIR 102 245 -17 196 368 30 54 chr20 1902893 1903059 -70250823 - MIR3 SINE MIR -45 163 2 279 342 0 33 chr20 1903163 1903283 -70250599 - L2 LINE L2 -5 3308 3193 498 214 91 6 chr20 1903671 1903838 -70250044 - MIR3 SINE MIR -8 200 34 687 297 82 0 chr20 1904043 1904312 -70249570 - L1MC4a LINE L1 -1951 5857 5567 252 253 24 24 chr20 1904611 1904694 -70249188 - MIR SINE MIR -72 190 108 195 197 15 61 chr20 1906274 1906340 -70247542 + L2 LINE L2 2439 2501 -813 597 224 104 27 chr20 1906376 1906559 -70247323 + MER63A DNA MER1_type 14 210 0 1799 200 63 0 chr20 1906895 1907290 -70246592 - Tigger6 DNA MER2_type 0 1597 1178 7210 53 7 0 chr20 1907299 1908628 -70245254 - L1PA7 LINE L1 0 6154 4820 6587 114 48 0 chr20 1908628 1909577 -70244305 - L1P3 LINE L1 -5444 1017 23 451 232 8 16 chr20 1909577 1909702 -70244180 - Tigger6 DNA MER2_type -384 1213 1090 556 296 54 10 chr20 1910028 1910231 -70243651 - MIR SINE MIR -43 219 8 2499 137 62 5 chr20 1910896 1911299 -70242583 + MSTA LTR MaLR 1 426 -2 349 333 14 7 chr20 1911857 1912004 -70241878 + MIR SINE MIR 79 226 -36 297 262 10 10 chr20 1912486 1912582 -70241300 - MIR SINE MIR -62 146 66 2125 164 19 5 chr20 1914581 1914958 -70238924 - MLT1B LTR MaLR -8 382 1 553 283 33 53 chr20 1915283 1915527 -70238355 - MIR SINE MIR -17 245 7 207 232 0 0 chr20 1915763 1915819 -70238063 + (TA)n Simple_repeat Simple_repeat 1 56 0 5548 154 34 13 chr20 1915909 1916227 -70237655 - L1MA8 LINE L1 0 6291 5981 2176 93 0 4 chr20 1916227 1916506 -70237376 - AluSq SINE Alu -15 298 21 5548 154 34 13 chr20 1916506 1917289 -70236593 - L1MA8 LINE L1 -310 5981 5167 1607 204 42 0 chr20 1917330 1917663 -70236219 - L1MA8 LINE L1 -976 5170 4824 1008 229 0 8 chr20 1917662 1917898 -70235984 - L1MA8 LINE L1 -2123 4023 3790 * 1860 162 3 16 chr20 1918348 1918662 -70235220 - AluSx SINE Alu -2 310 1 374 279 90 69 chr20 1918671 1918904 -70234978 - MIR SINE MIR -13 249 12 371 285 16 59 chr20 1919166 1919352 -70234530 - L2 LINE L2 0 3313 3136 826 239 40 0 chr20 1919392 1919668 -70234214 - L1M4 LINE L1 -2135 4247 3961 355 156 26 26 chr20 1919671 1919748 -70234134 - HERVL74 LTR ERVL -1701 3984 3908 437 208 48 32 chr20 1919749 1919874 -70234008 - HERVL74 LTR ERVL -2042 3643 3517 * 750 223 11 17 chr20 1919865 1920040 -70233842 - HERVL74 LTR ERVL -3233 2452 2279 733 213 26 0 chr20 1920097 1920252 -70233630 - HERVL74 LTR ERVL -3530 2155 1997 2291 196 26 18 chr20 1920480 1920934 -70232948 + MER88 LTR ERVL 2 459 -5 450 259 18 0 chr20 1920942 1921054 -70232828 - L1M4 LINE L1 -4582 1802 1689 2413 243 34 32 chr20 1921178 1921948 -70231934 - L1M4 LINE L1 -4706 1678 908 471 228 192 31 chr20 1921949 1922142 -70231740 + MLT1D LTR MaLR 143 366 -139 1037 267 20 26 chr20 1922152 1922497 -70231385 - L1MA9 LINE L1 -34 6278 5936 481 232 16 0 chr20 1922498 1922623 -70231259 + MLT1D LTR MaLR 378 504 -1 737 306 79 6 chr20 1922634 1922951 -70230931 - MLT1I LTR MaLR -49 360 21 339 283 55 28 chr20 1923102 1923247 -70230635 + MIR SINE MIR 102 250 -12 686 284 108 22 chr20 1923719 1923987 -70229895 - L1MC4a LINE L1 -1951 5857 5567 1826 72 0 24 chr20 1924308 1924557 -70229325 - MER75B DNA T2_type 0 243 1 258 108 0 0 chr20 1925312 1925360 -70228522 + MIR SINE MIR 103 143 -65 242 208 50 50 chr20 1925453 1925554 -70228328 + MIR SINE MIR 84 184 -78 518 322 52 4 chr20 1925616 1925849 -70228033 + MIR SINE MIR 8 251 -11 435 278 18 77 chr20 1925937 1926106 -70227776 - MER5B DNA MER1_type -2 176 18 195 216 0 0 chr20 1926731 1926768 -70227114 - L2 LINE L2 -19 3294 3258 207 0 0 0 chr20 1927447 1927470 -70226412 + (CAA)n Simple_repeat Simple_repeat 2 24 0 3584 112 8 4 chr20 1928184 1928693 -70225189 + MER9 LTR ERVK 1 511 0 192 149 0 0 chr20 1929537 1929584 -70224298 + (CTAG)n Simple_repeat Simple_repeat 3 49 0 271 279 15 0 chr20 1931024 1931092 -70222790 - MER91 DNA MER1_type 0 190 122 2098 118 0 4 chr20 1931630 1931909 -70221973 + AluSg SINE Alu 1 278 -32 1005 122 6 17 chr20 1931913 1932095 -70221787 + (GAAA)n Simple_repeat Simple_repeat 1 179 0 1282 157 16 48 chr20 1932173 1932224 -70221658 - Tigger3(Golem) DNA MER2_type -3 3035 2984 4078 109 22 12 chr20 1932224 1932820 -70221062 + LTR43 LTR ERV1 1 602 0 1282 157 16 48 chr20 1932820 1933016 -70220866 - Tigger3(Golem) DNA MER2_type -54 2984 2796 1433 183 56 0 chr20 1933026 1933294 -70220588 + AluJb SINE Alu 12 294 -18 3208 125 29 91 chr20 1933303 1933548 -70220334 - Tigger3(Golem) DNA MER2_type -231 2798 2539 1507 181 63 13 chr20 1933548 1933851 -70220031 - 7SLRNA srpRNA srpRNA -1 319 2 3208 125 29 91 chr20 1933851 1934300 -70219582 - Tigger3(Golem) DNA MER2_type -490 2539 2147 321 223 27 18 chr20 1934382 1934494 -70219388 + L1MC/D LINE L1 5319 5431 -2377 383 82 0 0 chr20 1934499 1934548 -70219334 - Tigger3(Golem) DNA MER2_type -870 2159 2111 2385 165 48 10 chr20 1935930 1936342 -70217540 + MSTB1 LTR MaLR 5 432 0 358 289 117 22 chr20 1936466 1936548 -70217334 + L2 LINE L2 2439 2512 -802 580 303 24 14 chr20 1936548 1936756 -70217126 + MER63A DNA MER1_type 1 210 0 358 289 117 22 chr20 1936756 1936853 -70217029 + L2 LINE L2 2512 2635 -679 2362 49 0 23 chr20 1936876 1937180 -70216702 - AluY SINE Alu -14 297 1 281 328 6 71 chr20 1937226 1937409 -70216473 + L2 LINE L2 2968 3138 -175 1331 189 98 7 chr20 1937435 1937742 -70216140 - Tigger6 DNA MER2_type -6 1591 1257 1882 223 47 0 chr20 1937744 1938148 -70215734 - L1MCa LINE L1 -5929 497 75 679 295 29 19 chr20 1939156 1939363 -70214519 - MIR SINE MIR -35 227 19 362 241 58 135 chr20 1939875 1940149 -70213733 - L1MEd LINE L1 -5069 1050 798 654 322 57 12 chr20 1940471 1940716 -70213166 + MIR SINE MIR 6 261 -1 272 346 46 0 chr20 1941138 1941268 -70212614 - MIR SINE MIR -70 192 57 234 277 69 10 chr20 1941517 1941618 -70212264 - MIR SINE MIR -65 197 91 2011 174 23 23 chr20 1942931 1943226 -70210656 - MLT1B LTR MaLR 0 390 93 911 69 76 15 chr20 1943226 1943357 -70210525 - MER85 DNA T2_type 0 139 1 2011 174 23 23 chr20 1943357 1943451 -70210431 - MLT1B LTR MaLR -296 94 1 558 298 56 36 chr20 1943760 1944012 -70209870 - MIR SINE MIR 0 262 6 218 231 15 0 chr20 1944264 1944329 -70209553 + (CATATA)n Simple_repeat Simple_repeat 3 68 0 5661 162 25 6 chr20 1944401 1945951 -70207931 - L1MA8 LINE L1 0 6291 4711 2118 119 0 3 chr20 1945951 1946254 -70207628 - AluSc SINE Alu -7 302 1 5661 162 25 6 chr20 1946254 1946287 -70207595 - L1MA8 LINE L1 -1580 4711 4680 384 259 0 0 chr20 1946284 1946369 -70207513 - L1MA8 LINE L1 -2277 3869 3785 * 686 298 97 9 chr20 1946791 1947019 -70206863 - MIR SINE MIR -3 259 12 408 270 24 66 chr20 1947272 1947483 -70206399 - L2 LINE L2 0 3313 3112 746 236 27 41 chr20 1947488 1947780 -70206102 - L1M4 LINE L1 -2135 4011 3724 378 121 17 0 chr20 1947787 1947845 -70206037 - HERVL74 LTR ERVL -1705 3980 3922 645 232 35 84 chr20 1947973 1948374 -70205508 - HERVL74 LTR ERVL -3233 2452 1997 227 319 0 0 chr20 1948648 1948739 -70205143 - L2 LINE L2 -300 2972 2882 325 211 19 10 chr20 1948766 1948870 -70205012 + (TG)n Simple_repeat Simple_repeat 1 105 0 205 279 16 16 chr20 1948990 1949051 -70204831 - L2 LINE L2 -50 3263 3203 298 74 37 0 chr20 1949367 1949421 -70204461 + (TG)n Simple_repeat Simple_repeat 2 57 0 230 243 14 14 chr20 1949661 1949731 -70204151 - MIR SINE MIR -129 133 64 312 192 100 0 chr20 1950182 1950264 -70203618 - MIR SINE MIR -65 197 105 383 222 69 106 chr20 1950264 1950453 -70203429 + MER5A DNA MER1_type 1 182 -7 480 225 219 25 chr20 1950732 1950892 -70202990 - MIR SINE MIR -70 192 2 517 284 158 2 chr20 1950896 1951115 -70202767 + MIR SINE MIR 13 260 -2 1856 185 95 19 chr20 1951209 1951577 -70202305 - MSTD LTR MaLR 0 396 1 348 257 18 28 chr20 1951950 1952059 -70201823 - MIR SINE MIR -118 144 37 233 245 0 20 chr20 1952073 1952122 -70201760 - L2 LINE L2 -9 3263 3216 319 155 0 17 chr20 1952593 1952651 -70201231 - MIR SINE MIR -105 157 101 1151 243 108 49 chr20 1952956 1953535 -70200347 + L2 LINE L2 2701 3312 -1 290 286 109 8 chr20 1953545 1953664 -70200218 - MIR SINE MIR -65 197 67 491 237 153 6 chr20 1953664 1953841 -70200041 + LTR16A LTR ERVL 16 218 -232 2221 102 8 72 chr20 1953937 1954299 -70199583 + MLT1B LTR MaLR 4 342 -48 306 284 0 0 chr20 1954308 1954389 -70199493 + L2 LINE L2 2743 2823 -491 * 435 305 23 8 chr20 1954376 1954504 -70199378 + L2 LINE L2 3180 3309 -4 608 126 0 0 chr20 1954570 1954660 -70199222 - MLT1C LTR MaLR -46 459 333 2077 131 0 0 chr20 1954692 1955004 -70198878 - AluSx SINE Alu 0 312 1 273 128 0 0 chr20 1955007 1955046 -70198836 + MLT1B LTR MaLR 352 390 0 405 282 43 0 chr20 1955047 1955164 -70198718 - MIR SINE MIR -62 200 79 664 121 17 26 chr20 1955615 1955731 -70198151 - Charlie1 DNA MER1_type -16 2745 2631 1916 139 19 10 chr20 1955738 1956047 -70197835 + AluSx SINE Alu 1 312 0 717 89 32 8 chr20 1956051 1956174 -70197708 + GA-rich Low_complexity Low_complexity 2 127 0 772 242 34 6 chr20 1956201 1956379 -70197503 - MIR SINE MIR -78 184 2 352 313 30 30 chr20 1956960 1957091 -70196791 - L2 LINE L2 -4 3268 3138 180 171 0 73 chr20 1957155 1957196 -70196686 + L2 LINE L2 3271 3308 -5 858 194 191 12 chr20 1957246 1957498 -70196384 - MLT1J2 LTR MaLR 0 450 154 632 207 72 33 chr20 1957701 1957951 -70195931 - MLT1K LTR MaLR -1 587 295 204 168 12 62 chr20 1958018 1958179 -70195703 + (TA)n Simple_repeat Simple_repeat 1 153 0 335 293 130 40 chr20 1959058 1959311 -70194571 - L1ME4a LINE L1 -2 6119 5844 215 294 15 0 chr20 1959311 1959379 -70194503 + L2 LINE L2 3148 3216 -56 332 320 39 8 chr20 1959451 1959579 -70194303 - MIR SINE MIR -46 216 85 802 150 0 0 chr20 1959788 1959921 -70193961 - FRAM SINE Alu -3 173 41 1186 237 49 23 chr20 1960250 1960558 -70193324 + LTR16C LTR ERVL 169 484 -7 629 286 37 86 chr20 1960836 1961185 -70192697 + L2 LINE L2 2922 3253 -19 354 277 34 0 chr20 1962068 1962187 -70191695 + MIR3 SINE MIR 9 131 -77 725 302 35 58 chr20 1962351 1962778 -70191104 + L2 LINE L2 2897 3313 0 191 215 253 0 chr20 1963100 1963179 -70190703 - MIR SINE MIR -1 261 163 * 425 186 144 0 chr20 1963170 1963267 -70190615 + L2 LINE L2 3203 3313 0 * 455 211 79 9 chr20 1963265 1963379 -70190503 - MIR SINE MIR -115 147 26 270 175 68 42 chr20 1964142 1964249 -70189633 + MLT1L LTR MaLR 200 391 -202 356 231 161 46 chr20 1964325 1964455 -70189427 + L2 LINE L2 3163 3307 -6 577 268 95 85 chr20 1964825 1965236 -70188646 - MLT1J LTR MaLR -6 505 91 260 197 66 16 chr20 1965182 1965243 -70188639 - LTR67 LTR ERVL -403 154 91 * 806 285 38 13 chr20 1965399 1965634 -70188248 + MIR SINE MIR 8 248 -14 2628 124 12 19 chr20 1965648 1966074 -70187808 + L1PA13 LINE L1 5737 6159 -4 261 258 124 0 chr20 1966218 1966307 -70187575 + MIR SINE MIR 48 147 -61 311 206 137 0 chr20 1966886 1966959 -70186923 + MIR SINE MIR 64 146 -62 987 205 60 5 chr20 1967233 1967448 -70186434 - MIR SINE MIR 0 262 36 402 308 83 6 chr20 1967507 1967663 -70186219 - L3 LINE CR1 -56 1521 1354 432 232 113 26 chr20 1967852 1968003 -70185879 + MIR SINE MIR 98 261 -1 314 284 71 31 chr20 1968093 1968220 -70185662 - MIR3 SINE MIR -10 198 67 324 253 241 44 chr20 1968551 1968709 -70185173 + MIR3 SINE MIR 2 152 -56 641 169 0 4 chr20 1969469 1969604 -70184278 - MER5A DNA MER1_type 0 189 1 271 259 0 0 chr20 1969639 1969693 -70184189 - L2 LINE L2 -51 3221 3168 504 347 31 5 chr20 1969715 1969911 -70183971 + MIR SINE MIR 4 204 -58 1558 159 14 27 chr20 1969926 1970222 -70183660 + AluJo SINE Alu 1 292 -20 791 296 106 40 chr20 1970346 1970724 -70183158 - L2 LINE L2 0 3313 2911 339 330 35 25 chr20 1970908 1971108 -70182774 + MIR SINE MIR 61 262 0 361 269 82 15 chr20 1971521 1971655 -70182227 - L1ME4a LINE L1 -2 6119 5977 273 252 71 31 chr20 1971728 1971855 -70182027 - L1ME4a LINE L1 -266 5855 5724 915 295 58 42 chr20 1972417 1972899 -70180983 - MLT1L LTR MaLR -79 536 47 324 321 123 43 chr20 1973016 1973365 -70180517 + MLT1K LTR MaLR 179 555 -33 413 267 33 13 chr20 1973421 1973571 -70180311 + MER103 DNA DNA 1 153 -13 470 17 17 0 chr20 1973917 1973976 -70179906 + (CA)n Simple_repeat Simple_repeat 2 61 0 255 283 75 19 chr20 1973979 1974085 -70179797 + L2 LINE L2 3142 3253 -19 313 300 31 31 chr20 1974109 1974239 -70179643 - MIR3 SINE MIR -27 181 52 218 248 9 53 chr20 1974245 1974358 -70179524 + C-rich Low_complexity Low_complexity 4 111 0 823 107 0 50 chr20 1974366 1974487 -70179395 + AluSq SINE Alu 69 183 -130 1911 111 7 28 chr20 1974493 1974831 -70179051 - AluSx SINE Alu 0 332 1 384 219 110 0 chr20 1974852 1974934 -70178948 + MER117 DNA MER1_type 60 150 -47 288 282 154 44 chr20 1975129 1975512 -70178370 - L2 LINE L2 -340 2974 2550 1418 272 40 45 chr20 1975955 1976575 -70177307 + L2 LINE L2 2525 3139 -174 2794 88 6 0 chr20 1976575 1976937 -70176945 + THE1B LTR MaLR 1 364 0 1418 272 40 45 chr20 1976937 1977111 -70176771 + L2 LINE L2 3139 3312 -1 481 268 45 66 chr20 1977189 1977476 -70176406 - L1MCa LINE L1 -5232 1194 914 587 301 28 38 chr20 1978002 1978215 -70175667 + MIR SINE MIR 52 262 0 1137 217 13 4 chr20 1978725 1978955 -70174927 - MIR SINE MIR -22 240 9 183 227 23 45 chr20 1979465 1979509 -70174373 + L2 LINE L2 3205 3247 -25 796 288 151 24 chr20 1979642 1979753 -70174129 + L2 LINE L2 2844 2940 -373 1929 174 7 64 chr20 1979753 1980001 -70173881 - MSTD LTR MaLR 0 396 180 1905 142 30 3 chr20 1980001 1980303 -70173579 - AluSx SINE Alu -2 310 1 1929 174 7 64 chr20 1980303 1980474 -70173408 - MSTD LTR MaLR -216 180 1 796 288 151 24 chr20 1980474 1980779 -70173103 + L2 LINE L2 2940 3313 0 1050 261 103 40 chr20 1981131 1981609 -70172273 - L2 LINE L2 -1 3312 2803 3192 157 38 7 chr20 1981713 1982273 -70171609 - L1MB3 LINE L1 0 6183 5607 1159 287 80 22 chr20 1983272 1983735 -70170147 + L2 LINE L2 2817 3306 -7 973 294 89 12 chr20 1983759 1984341 -70169541 + L2 LINE L2 2566 3186 -127 368 290 75 32 chr20 1984677 1984863 -70169019 + L2 LINE L2 3119 3312 -1 238 342 63 0 chr20 1984894 1985005 -70168877 - MIR SINE MIR -75 187 70 270 318 0 13 chr20 1985005 1985159 -70168723 + (TG)n Simple_repeat Simple_repeat 1 152 0 509 256 143 30 chr20 1985964 1986167 -70167715 + MIR SINE MIR 8 233 -29 589 276 158 13 chr20 1986186 1986414 -70167468 - MIR SINE MIR 0 262 2 441 277 22 36 chr20 1986578 1986715 -70167167 - MIR3 SINE MIR -32 176 42 451 254 127 78 chr20 1986833 1987038 -70166844 - MIR SINE MIR -17 245 31 1525 240 113 15 chr20 1987190 1988024 -70165858 - L2 LINE L2 -5 3308 2380 808 209 12 6 chr20 1988076 1988239 -70165643 - MER5A DNA MER1_type -23 166 3 857 289 29 26 chr20 1988643 1988987 -70164895 + MLT1I LTR MaLR 5 349 -60 726 213 202 0 chr20 1988987 1989170 -70164712 - MER58A DNA MER1_type 0 224 5 280 151 19 0 chr20 1989170 1989223 -70164659 + MLT1I LTR MaLR 340 393 -16 908 297 82 25 chr20 1989330 1989815 -70164067 + LTR33 LTR ERVL 4 516 -5 182 286 117 39 chr20 1989847 1989924 -70163958 + MIR SINE MIR 64 146 -62 422 208 140 1 chr20 1990213 1990336 -70163546 + MIR SINE MIR 32 166 -85 364 311 48 0 chr20 1990350 1990453 -70163429 + L2 LINE L2 3206 3313 0 366 333 135 0 chr20 1990498 1990639 -70163243 + MIR SINE MIR 44 203 -59 466 191 198 0 chr20 1990777 1990903 -70162979 - MIR SINE MIR -74 188 38 215 342 36 63 chr20 1990951 1991062 -70162820 + MIR3 SINE MIR 76 183 -25 386 316 21 21 chr20 1991818 1992005 -70161877 + MIR3 SINE MIR 1 187 -21 1569 268 123 2 chr20 1992446 1992860 -70161022 + LTR16B LTR ERVL 1 464 0 432 255 179 0 chr20 1992914 1993059 -70160823 - MIR SINE MIR -3 259 89 254 343 6 90 chr20 1993090 1993256 -70160626 + L2 LINE L2 3121 3272 0 258 241 52 0 chr20 1993516 1993574 -70160308 + MIR SINE MIR 112 172 -90 508 243 7 49 chr20 1993991 1994135 -70159747 - MIR3 SINE MIR -26 182 45 * 758 315 121 30 chr20 1994126 1994149 -70159733 + L2 LINE L2 2488 2507 -806 234 0 0 0 chr20 1994149 1994175 -70159707 + (TTCA)n Simple_repeat Simple_repeat 2 27 0 758 315 121 30 chr20 1994175 1994880 -70159002 + L2 LINE L2 2507 3297 -16 180 0 0 0 chr20 1994974 1994994 -70158888 + (TTTTA)n Simple_repeat Simple_repeat 1 20 0 1778 152 0 31 chr20 1994994 1995283 -70158599 - AluJo SINE Alu -32 280 1 730 167 0 38 chr20 1995315 1995501 -70158381 + GA-rich Low_complexity Low_complexity 2 180 0 446 281 113 0 chr20 1996470 1996659 -70157223 + MIR SINE MIR 34 244 -18 221 333 0 0 chr20 1996940 1997003 -70156879 + L2 LINE L2 2913 2975 -338 363 283 100 33 chr20 1997153 1997273 -70156609 - L2 LINE L2 -1 3271 3144 * 514 231 29 0 chr20 1997271 1997375 -70156507 - MER5B DNA MER1_type -4 174 68 2028 138 0 25 chr20 1997378 1997743 -70156139 - AluJb SINE Alu 0 357 1 189 311 16 0 chr20 1997751 1997812 -70156070 - MER5B DNA MER1_type -113 65 4 457 300 64 53 chr20 1997819 1998176 -70155706 - L2 LINE L2 -127 3186 2826 300 270 101 20 chr20 1999063 1999211 -70154671 + MIR3 SINE MIR 46 205 -3 203 227 45 45 chr20 1999931 1999997 -70153885 + MIR SINE MIR 86 151 -57 271 301 112 36 chr20 2000345 2000511 -70153371 + MIR SINE MIR 15 192 -62 340 311 9 0 chr20 2000713 2000819 -70153063 + MIR3 SINE MIR 63 169 -39 235 333 48 12 chr20 2001094 2001178 -70152704 - L2 LINE L2 -23 3290 3204 941 229 86 25 chr20 2001215 2001569 -70152313 - L1M4 LINE L1 -3676 3172 2795 * 1268 211 215 39 chr20 2001548 2001873 -70152009 - L1M4 LINE L1 -5239 1611 1345 188 35 35 0 chr20 2001873 2001902 -70151980 + (TTG)n Simple_repeat Simple_repeat 1 30 0 1268 211 215 39 chr20 2001902 2002093 -70151789 - L1M4 LINE L1 -5505 1345 1004 342 288 59 31 chr20 2002353 2002575 -70151307 - L1M4 LINE L1 -6301 445 218 268 305 228 18 chr20 2002676 2003063 -70150819 - L2 LINE L2 -190 3082 2596 669 319 31 4 chr20 2003513 2003742 -70150140 + MIR SINE MIR 16 250 -12 210 365 137 32 chr20 2004066 2004729 -70149153 - L2 LINE L2 -347 2967 2235 642 264 3 6 chr20 2005342 2005666 -70148216 + GA-rich Low_complexity Low_complexity 1 322 0 282 257 20 20 chr20 2005377 2005478 -70148404 + (CAGAGA)n Simple_repeat Simple_repeat 2 102 0 * 294 231 19 28 chr20 2005694 2005802 -70148080 + GA-rich Low_complexity Low_complexity 2 108 0 381 86 0 0 chr20 2005888 2005946 -70147936 + (GA)n Simple_repeat Simple_repeat 1 58 0 224 325 8 8 chr20 2005960 2006132 -70147750 + GA-rich Low_complexity Low_complexity 1 172 0 431 349 32 32 chr20 2006362 2006580 -70147302 + MIR SINE MIR 8 225 -37 359 316 70 13 chr20 2007613 2007771 -70146111 - MER117 DNA MER1_type -27 170 4 570 273 42 70 chr20 2007846 2008132 -70145750 - L2 LINE L2 -20 3293 3016 818 281 142 8 chr20 2008708 2009160 -70144722 - L2 LINE L2 -235 3078 2566 1143 123 0 0 chr20 2009201 2009421 -70144461 + (TCCA)n Simple_repeat Simple_repeat 1 220 0 462 284 89 98 chr20 2009431 2009868 -70144014 - L2 LINE L2 -3 3269 2837 1304 235 94 27 chr20 2010429 2010801 -70143081 + L2 LINE L2 2880 3283 -30 1934 137 3 51 chr20 2010801 2011114 -70142768 - AluSx SINE Alu -14 298 1 1304 235 94 27 chr20 2011114 2011145 -70142737 + L2 LINE L2 3283 3310 -3 305 305 21 21 chr20 2011191 2011286 -70142596 - MIR SINE MIR -148 114 20 820 180 19 66 chr20 2011297 2011338 -70142544 + L2 LINE L2 3112 3153 -160 2133 89 30 43 chr20 2011338 2011641 -70142241 - AluSx SINE Alu -13 299 1 820 180 19 66 chr20 2011641 2011810 -70142072 + L2 LINE L2 3153 3312 -1 623 189 101 63 chr20 2011931 2012090 -70141792 - MIR SINE MIR -70 192 28 296 285 26 80 chr20 2012788 2012939 -70140943 + MER5B DNA MER1_type 3 145 -33 1724 290 92 15 chr20 2013653 2014640 -70139242 - L2 LINE L2 -1 3312 2246 539 278 101 44 chr20 2015407 2015655 -70138227 + MIR SINE MIR 1 262 0 544 276 78 43 chr20 2015664 2015896 -70137986 - MIR SINE MIR -13 249 10 206 246 35 35 chr20 2016174 2016231 -70137651 - MIR SINE MIR -98 164 108 606 266 106 19 chr20 2016706 2016913 -70136969 + MIR SINE MIR 14 238 -24 183 42 0 0 chr20 2017112 2017136 -70136746 + (CAA)n Simple_repeat Simple_repeat 1 24 0 890 255 65 47 chr20 2017148 2017436 -70136446 + MLT1J LTR MaLR 3 299 -212 1859 235 88 32 chr20 2017436 2017960 -70135922 + MLT1H1 LTR MaLR 1 553 -2 890 255 65 47 chr20 2017960 2017993 -70135889 + MLT1J LTR MaLR 299 330 -181 243 182 13 91 chr20 2018005 2018082 -70135800 + MLT1J LTR MaLR 386 456 -55 391 280 48 71 chr20 2018326 2018494 -70135388 + MIR SINE MIR 26 189 -73 1309 242 120 54 chr20 2018599 2019133 -70134749 - MER115 DNA AcHobo -66 627 59 216 318 0 30 chr20 2019152 2019218 -70134664 - L2 LINE L2 -37 3235 3172 185 158 0 79 chr20 2019253 2019291 -70134591 + MIR SINE MIR 113 147 -61 417 257 155 30 chr20 2019500 2019839 -70134043 + L2 LINE L2 2751 3132 -181 249 257 95 0 chr20 2020102 2020176 -70133706 + MIR SINE MIR 177 257 -5 23 54 0 0 chr20 2020906 2020943 -70132939 + GC_rich Low_complexity Low_complexity 1 37 0 187 54 54 0 chr20 2020948 2020985 -70132897 + (CGGAG)n Simple_repeat Simple_repeat 5 43 0 537 299 14 14 chr20 2021237 2021381 -70132501 + MIR3 SINE MIR 3 146 -62 274 256 91 33 chr20 2022073 2022194 -70131688 - L1MC4a LINE L1 -1631 6177 6050 673 284 21 17 chr20 2022274 2022513 -70131369 - L1MC4a LINE L1 -1893 5915 5676 334 225 132 79 chr20 2022535 2022762 -70131120 - MLT1H LTR MaLR -9 540 332 582 249 74 21 chr20 2022803 2022992 -70130890 - MLT1H LTR MaLR -331 218 20 577 199 41 53 chr20 2023165 2023336 -70130546 + L1MC3 LINE L1 7221 7389 -396 7890 166 51 73 chr20 2023342 2024317 -70129565 - L1MC3 LINE L1 -620 7583 6671 2285 83 20 0 chr20 2024317 2024618 -70129264 - AluSp SINE Alu -6 307 1 7890 166 51 73 chr20 2024618 2025593 -70128289 - L1MC3 LINE L1 -1532 6671 5676 1703 172 42 20 chr20 2025600 2025954 -70127928 + MLT2B1 LTR ERVL 1 362 -158 7906 247 68 24 chr20 2025985 2026044 -70127838 - L1MC3 LINE L1 -886 5678 5623 1536 185 35 0 chr20 2026044 2026304 -70127578 - AluJo SINE Alu -2 310 42 1720 136 0 19 chr20 2026306 2026564 -70127318 - AluSx SINE Alu -59 253 1 7906 247 68 24 chr20 2026564 2027047 -70126835 - L1MC3 LINE L1 -941 5623 5162 1494 138 0 9 chr20 2027047 2027272 -70126610 - AluSg/x SINE Alu -3 307 85 7906 247 68 24 chr20 2027272 2029568 -70124314 - L1MC3 LINE L1 -1402 5162 2713 1532 163 15 45 chr20 2029583 2029674 -70124208 - L1MB7 LINE L1 -19 6165 6073 2009 113 63 14 chr20 2029674 2029958 -70123924 + AluSx SINE Alu 2 299 -13 1532 163 15 45 chr20 2029958 2030198 -70123684 - L1MB7 LINE L1 -111 6073 5844 345 191 0 0 chr20 2030202 2030265 -70123617 - FRAM/FAM SINE Alu -100 66 4 1394 170 10 35 chr20 2030265 2030554 -70123328 - L1MB7 LINE L1 -346 5838 5557 2738 185 50 35 chr20 2030561 2031775 -70122107 - L1MB4 LINE L1 -250 5930 4693 1080 184 108 54 chr20 2031782 2032098 -70121784 + MLT1D LTR MaLR 173 505 0 * 1091 155 11 0 chr20 2032096 2032283 -70121599 - MER46B DNA MER2_type 0 236 48 2307 106 48 34 chr20 2032284 2032642 -70121240 + THE1B LTR MaLR 1 363 -1 315 0 0 0 chr20 2032711 2032746 -70121136 + (TG)n Simple_repeat Simple_repeat 2 36 0 719 170 0 0 chr20 2032756 2032862 -70121020 - FLAM_A SINE Alu -25 117 12 1125 135 6 0 chr20 2032873 2033051 -70120831 - MER46B DNA MER2_type -181 55 2 1970 244 89 78 chr20 2033054 2034008 -70119874 - L1MC3 LINE L1 -5080 965 1 246 297 28 83 chr20 2034317 2034462 -70119420 + L2 LINE L2 3177 3313 0 725 270 42 0 chr20 2034507 2034696 -70119186 - MIR SINE MIR 0 262 66 372 371 7 0 chr20 2034790 2034930 -70118952 - MIR SINE MIR -109 153 13 232 278 56 0 chr20 2034964 2035054 -70118828 + L2 LINE L2 2963 3057 -215 234 315 105 49 chr20 2035134 2035277 -70118605 + MIR SINE MIR 2 152 -110 229 365 149 14 chr20 2035343 2035491 -70118391 + L2 LINE L2 3104 3271 -1 230 253 0 58 chr20 2035611 2035698 -70118184 + MER112 DNA MER1_type 13 94 -166 237 319 43 0 chr20 2035701 2035795 -70118087 + MER112 DNA MER1_type 69 166 -94 334 272 26 26 chr20 2035854 2035968 -70117914 + MER112 DNA MER1_type 147 260 0 420 275 99 22 chr20 2035977 2036159 -70117723 - L3 LINE CR1 -74 1503 1308 778 248 53 46 chr20 2036787 2037069 -70116813 - L2 LINE L2 0 3272 2989 431 237 21 0 chr20 2037637 2037734 -70116148 - MER45 DNA AcHobo -56 122 24 426 331 69 0 chr20 2037820 2037995 -70115887 - MIR3 SINE MIR -16 192 6 549 293 214 8 chr20 2038351 2038743 -70115139 + L2 LINE L2 2841 3313 0 288 314 7 51 chr20 2038756 2038893 -70114989 - L2 LINE L2 -3 3310 3180 2204 97 3 0 chr20 2039025 2039323 -70114559 - AluSg SINE Alu -11 299 1 188 176 0 0 chr20 2039772 2039806 -70114076 + L2 LINE L2 3028 3061 -211 399 98 0 0 chr20 2039864 2039925 -70113957 + (TCCA)n Simple_repeat Simple_repeat 1 61 0 269 238 63 0 chr20 2039949 2040012 -70113870 - L2 LINE L2 -68 3204 3138 467 194 7 57 chr20 2040121 2040255 -70113627 + MER3 DNA MER1_type 29 151 -58 251 224 26 53 chr20 2040458 2040534 -70113348 - MIR SINE MIR -90 118 45 197 306 266 8 chr20 2040610 2040734 -70113148 - L2 LINE L2 -1 3271 3116 283 212 204 9 chr20 2041051 2041164 -70112718 - MIR SINE MIR -96 166 32 407 179 36 0 chr20 2041372 2041456 -70112426 + MIR SINE MIR 70 156 -106 562 266 113 8 chr20 2041473 2041729 -70112153 + L2 LINE L2 2830 3112 -201 205 185 130 0 chr20 2041988 2042042 -70111840 + L2 LINE L2 3193 3253 -60 211 173 192 0 chr20 2042963 2043015 -70110867 - MIR SINE MIR -196 66 5 199 139 0 56 chr20 2043213 2043249 -70110633 + MER5A DNA MER1_type 156 189 0 561 231 51 19 chr20 2043344 2043500 -70110382 - MIR SINE MIR 0 262 102 258 306 102 27 chr20 2044642 2044789 -70109093 + MIR SINE MIR 1 158 -104 573 282 151 17 chr20 2044812 2045569 -70108313 - L2 LINE L2 -2 3311 2444 185 182 23 0 chr20 2045839 2045883 -70107999 - MIR SINE MIR -104 104 60 220 136 23 0 chr20 2045974 2046018 -70107864 + L2 LINE L2 2922 2966 -348 291 353 98 27 chr20 2046878 2047102 -70106780 - L2 LINE L2 -17 3255 3016 277 286 107 9 chr20 2047111 2047223 -70106659 - L2 LINE L2 -2 3311 3189 285 89 0 0 chr20 2047366 2047411 -70106471 + (GGGA)n Simple_repeat Simple_repeat 4 48 0 2313 79 0 28 chr20 2047554 2047871 -70106011 - AluSx SINE Alu -4 308 1 327 259 5 54 chr20 2048897 2049082 -70104800 + (CA)n Simple_repeat Simple_repeat 1 176 0 221 314 12 0 chr20 2049138 2049224 -70104658 + (CA)n Simple_repeat Simple_repeat 2 88 0 368 275 169 0 chr20 2049535 2049695 -70104187 + L3 LINE CR1 1391 1577 0 429 247 31 21 chr20 2049715 2049909 -70103973 - Charlie7 DNA MER1_type 0 2612 2417 563 304 72 36 chr20 2049931 2050181 -70103701 - MIR SINE MIR 0 262 4 490 220 10 0 chr20 2050363 2050463 -70103419 + MER5A DNA MER1_type 9 109 -80 548 265 309 8 chr20 2050674 2051124 -70102758 + L2 LINE L2 2725 3307 -6 246 213 118 88 chr20 2051514 2051650 -70102232 + MIR SINE MIR 53 192 -70 198 322 157 9 chr20 2051741 2051856 -70102026 + MIR3 SINE MIR 14 145 -63 1302 250 152 11 chr20 2052296 2053096 -70100786 - L2 LINE L2 -1 3312 2394 188 33 0 33 chr20 2053137 2053167 -70100715 + (TCTCTG)n Simple_repeat Simple_repeat 2 30 0 277 219 287 1 chr20 2053186 2053310 -70100572 - MIR SINE MIR -51 157 1 637 309 36 5 chr20 2053537 2053760 -70100122 + MIR SINE MIR 13 242 -20 1032 215 0 0 chr20 2054244 2054430 -70099452 + MER5A DNA MER1_type 1 186 -3 972 191 0 5 chr20 2054591 2054780 -70099102 - AluJo SINE Alu -2 310 123 318 217 191 9 chr20 2054861 2054976 -70098906 - MIR SINE MIR -51 211 76 408 266 62 23 chr20 2055023 2055200 -70098682 - L2 LINE L2 -119 3194 3011 221 286 36 0 chr20 2055197 2055253 -70098629 + MIR3 SINE MIR 109 166 -42 * 183 270 234 27 chr20 2055760 2055871 -70098011 + MIR SINE MIR 85 218 -44 218 258 93 31 chr20 2055980 2056077 -70097805 - MIR SINE MIR -110 152 50 503 279 156 8 chr20 2056121 2056358 -70097524 - L2 LINE L2 -580 2734 2463 719 237 98 44 chr20 2056394 2056668 -70097214 + L2 LINE L2 3025 3313 0 363 268 102 13 chr20 2057256 2057413 -70096469 + L2 LINE L2 2618 2788 -526 297 274 244 17 chr20 2057503 2057733 -70096149 + L2 LINE L2 2944 3225 -88 550 266 136 14 chr20 2057832 2058046 -70095836 - MIR SINE MIR -5 257 18 300 279 117 9 chr20 2058152 2058263 -70095619 + MIR3 SINE MIR 33 155 -53 32 0 0 0 chr20 2058943 2058975 -70094907 + GC_rich Low_complexity Low_complexity 1 32 0 237 219 0 16 chr20 2059201 2059265 -70094617 + (CGGGG)n Simple_repeat Simple_repeat 1 63 0 21 36 0 0 chr20 2059333 2059361 -70094521 + GC_rich Low_complexity Low_complexity 1 28 0 28 71 0 0 chr20 2059375 2059431 -70094451 + GC_rich Low_complexity Low_complexity 1 56 0 23 78 0 0 chr20 2059646 2059697 -70094185 + GC_rich Low_complexity Low_complexity 1 51 0 275 283 7 36 chr20 2059768 2059945 -70093937 + CT-rich Low_complexity Low_complexity 6 268 0 22 0 0 0 chr20 2059976 2059998 -70093884 + GC_rich Low_complexity Low_complexity 1 22 0 28 29 0 0 chr20 2060147 2060182 -70093700 + GC_rich Low_complexity Low_complexity 1 35 0 365 146 195 0 chr20 2060347 2060429 -70093453 - MIR SINE MIR -69 139 42 193 269 0 19 chr20 2063232 2063284 -70090598 - MIR SINE MIR -60 148 98 257 296 0 0 chr20 2063838 2063909 -70089973 + L2 LINE L2 2704 2774 -540 233 345 0 23 chr20 2064062 2064149 -70089733 - MER103 DNA DNA -67 99 15 241 292 17 50 chr20 2064244 2064364 -70089518 + L2 LINE L2 2920 3035 -237 501 297 139 5 chr20 2064421 2064623 -70089259 + MIR SINE MIR 34 262 0 2233 65 41 0 chr20 2064786 2065078 -70088804 - AluSp SINE Alu -4 309 6 372 333 58 24 chr20 2065529 2065736 -70088146 - MIR SINE MIR -43 219 6 2386 90 0 0 chr20 2065854 2066165 -70087717 - AluSx SINE Alu -1 311 1 317 304 37 30 chr20 2066965 2067100 -70086782 - MIR SINE MIR -71 191 56 1095 253 104 23 chr20 2067160 2067424 -70086458 - L2 LINE L2 -4 3309 2993 2411 87 0 0 chr20 2067424 2067736 -70086146 + AluSx SINE Alu 1 312 0 1095 253 104 23 chr20 2067736 2067914 -70085968 - L2 LINE L2 -320 2993 2831 616 217 53 16 chr20 2067929 2068132 -70085750 - MIR SINE MIR -15 247 40 186 286 60 0 chr20 2068127 2068211 -70085671 + L2 LINE L2 2606 2694 -620 * 830 310 111 18 chr20 2068265 2068723 -70085159 + L2 LINE L2 2812 3312 -1 243 390 8 8 chr20 2069170 2069293 -70084589 + MIR SINE MIR 70 192 -70 210 321 30 30 chr20 2069384 2069515 -70084367 + MIR3 SINE MIR 64 194 -14 517 255 22 33 chr20 2069593 2069777 -70084105 + MIR SINE MIR 31 212 -50 257 206 221 59 chr20 2070029 2070165 -70083717 + MIR SINE MIR 34 191 -71 243 158 0 0 chr20 2070302 2070340 -70083542 + MIR SINE MIR 112 149 -59 392 285 162 39 chr20 2070766 2070945 -70082937 - MIR SINE MIR -17 245 45 585 297 151 34 chr20 2070957 2071593 -70082289 - L2 LINE L2 -39 3274 2461 235 273 191 0 chr20 2071659 2071769 -70082113 - MIR SINE MIR -115 147 17 440 328 119 25 chr20 2072181 2072501 -70081381 + L2 LINE L2 2923 3272 0 240 269 27 20 chr20 2072989 2073138 -70080744 + (CA)n Simple_repeat Simple_repeat 1 150 0 2298 94 0 0 chr20 2074194 2074491 -70079391 + AluSq SINE Alu 1 297 -16 375 226 0 12 chr20 2074590 2074674 -70079208 + L2 LINE L2 1912 1994 -1320 233 262 135 48 chr20 2074786 2074912 -70078970 + L2 LINE L2 3146 3282 -31 428 178 33 0 chr20 2075229 2075319 -70078563 - L2 LINE L2 -7 3306 3214 310 327 115 62 chr20 2075400 2075626 -70078256 - L1ME4a LINE L1 -11 6110 5873 352 303 101 0 chr20 2076017 2076136 -70077746 + L1ME4a LINE L1 5985 6115 -6 233 331 46 13 chr20 2076138 2076289 -70077593 - L1ME4a LINE L1 -242 5879 5724 259 333 0 0 chr20 2076378 2076456 -70077426 - L1ME4a LINE L1 -2214 5594 5517 351 322 68 11 chr20 2078855 2079032 -70074850 - MIR SINE MIR -48 214 28 262 278 26 0 chr20 2079062 2079152 -70074730 - MIR SINE MIR -66 142 104 354 273 133 0 chr20 2079418 2079546 -70074336 + L2 LINE L2 2899 3043 -229 299 284 147 0 chr20 2079574 2079669 -70074213 + MIR SINE MIR 96 204 -58 292 309 0 12 chr20 2080271 2080352 -70073530 - MIR SINE MIR -116 146 67 268 173 158 0 chr20 2080404 2080475 -70073407 - MIR3 SINE MIR -50 158 77 193 304 0 0 chr20 2080525 2080571 -70073311 - L2 LINE L2 -2 3270 3225 413 308 64 6 chr20 2080959 2081115 -70072767 - MIR3 SINE MIR -8 200 36 684 304 84 0 chr20 2081331 2081594 -70072288 - L1MC4a LINE L1 -1957 5851 5567 253 299 73 36 chr20 2081670 2081807 -70072075 - MIR3 SINE MIR -66 142 1 348 274 110 24 chr20 2081899 2082063 -70071819 - MIR SINE MIR -82 180 3 808 131 8 0 chr20 2082131 2082253 -70071629 + AluSg/x SINE Alu 177 299 -11 303 330 61 0 chr20 2082738 2082853 -70071029 + MIR SINE MIR 98 219 -43 2013 96 12 52 chr20 2082882 2083206 -70070676 - AluSq SINE Alu -2 311 1 408 261 27 0 chr20 2083223 2083334 -70070548 + MIR SINE MIR 79 192 -70 316 240 108 39 chr20 2083383 2083512 -70070370 + MIR SINE MIR 84 221 -41 686 295 59 25 chr20 2083548 2083785 -70070097 + MIR SINE MIR 14 258 -4 532 274 65 18 chr20 2083866 2084034 -70069848 - MER5B DNA MER1_type -2 176 1 227 211 0 0 chr20 2084689 2084727 -70069155 - L2 LINE L2 -18 3254 3217 199 256 132 23 chr20 2084785 2084914 -70068968 + MIR SINE MIR 108 250 -12 222 286 57 14 chr20 2085536 2085606 -70068276 - MIR SINE MIR -64 198 126 222 341 85 0 chr20 2085835 2085964 -70067918 + MIR SINE MIR 28 167 -95 182 356 0 0 chr20 2086789 2086848 -70067034 - MIR SINE MIR 0 262 204 350 294 27 76 chr20 2087404 2087588 -70066294 - HAL1b LINE L1 -5 1343 1169 301 342 76 30 chr20 2087609 2087846 -70066036 - L1MC4a LINE L1 -1911 5897 5650 399 281 89 20 chr20 2088407 2088553 -70065329 + MIR3 SINE MIR 32 187 -21 344 254 136 9 chr20 2088539 2088649 -70065233 + L2 LINE L2 3147 3270 -2 * 474 18 0 0 chr20 2088663 2088718 -70065164 + (TTGG)n Simple_repeat Simple_repeat 2 56 0 406 256 78 67 chr20 2088721 2088901 -70064981 - MIR SINE MIR -76 186 5 254 226 122 43 chr20 2089980 2090095 -70063787 + MIR SINE MIR 139 262 0 208 171 24 0 chr20 2090223 2090264 -70063618 + (TG)n Simple_repeat Simple_repeat 1 42 0 347 315 162 25 chr20 2090306 2090503 -70063379 + MIR SINE MIR 29 252 -10 779 259 37 5 chr20 2091282 2091471 -70062411 - MIR SINE MIR -21 241 47 277 281 16 0 chr20 2091585 2091649 -70062233 + MIR SINE MIR 53 117 -91 263 286 25 67 chr20 2092090 2092209 -70061673 - MIR3 SINE MIR -86 122 9 266 311 151 8 chr20 2092952 2093071 -70060811 - L2 LINE L2 -1 3271 3136 426 293 141 39 chr20 2093139 2093395 -70060487 - L2 LINE L2 -24 3289 3008 631 264 71 0 chr20 2093601 2093798 -70060084 - MER46C DNA MER2_type -109 229 19 928 239 137 0 chr20 2093818 2094102 -70059780 - L2 LINE L2 -506 2808 2486 229 129 0 0 chr20 2094811 2094842 -70059040 - MER91 DNA MER1_type -77 63 33 269 383 31 25 chr20 2094933 2095129 -70058753 + L2 LINE L2 3076 3272 0 2420 89 3 13 chr20 2095268 2095584 -70058298 - AluSp SINE Alu 0 313 1 608 251 18 127 chr20 2095672 2095803 -70058079 - MIR SINE MIR 0 262 177 853 158 152 0 chr20 2095803 2095967 -70057915 - MER5A DNA MER1_type 0 189 1 608 251 18 127 chr20 2095967 2096118 -70057764 - MIR SINE MIR -85 177 11 196 359 111 0 chr20 2096631 2096748 -70057134 - L2 LINE L2 -1 3271 3142 297 0 0 0 chr20 2096748 2096781 -70057101 + (TTCA)n Simple_repeat Simple_repeat 1 33 0 905 290 112 22 chr20 2096782 2097630 -70056252 - L2 LINE L2 -14 3299 2364 495 301 58 52 chr20 2098970 2099315 -70054567 - L1MC/D LINE L1 -2141 5667 5321 213 197 127 28 chr20 2099661 2099732 -70054150 + MER91C DNA MER1_type 33 110 -30 207 250 220 10 chr20 2100414 2100514 -70053368 - L2 LINE L2 -4 3309 3189 345 306 147 17 chr20 2100602 2100786 -70053096 + MIR SINE MIR 3 205 -41 1072 195 49 26 chr20 2101001 2101227 -70052655 - MIR SINE MIR 0 262 32 193 320 0 0 chr20 2101381 2101431 -70052451 + L2 LINE L2 3223 3272 0 426 53 0 0 chr20 2102662 2102719 -70051163 + (CCA)n Simple_repeat Simple_repeat 2 58 0 232 162 0 0 chr20 2103475 2103512 -70050370 + MIR SINE MIR 116 152 -110 21 0 0 0 chr20 2104306 2104327 -70049555 + AT_rich Low_complexity Low_complexity 1 21 0 371 313 114 0 chr20 2104816 2104992 -70048890 + MIR SINE MIR 48 243 -19 205 333 164 24 chr20 2105045 2105210 -70048672 + MIR SINE MIR 69 256 -6 278 330 210 10 chr20 2105287 2105487 -70048395 - MIR SINE MIR -16 246 7 512 279 134 0 chr20 2105552 2105724 -70048158 - MIR SINE MIR -32 230 36 337 331 70 7 chr20 2105743 2105885 -70047997 - MIR SINE MIR -64 198 48 604 247 22 60 chr20 2106604 2106786 -70047096 - MIR SINE MIR -19 243 69 671 221 137 5 chr20 2107124 2107328 -70046554 + L1ME3 LINE L1 5926 6156 -6 416 325 35 6 chr20 2107685 2107854 -70046028 + MIR SINE MIR 77 250 -12 207 175 0 0 chr20 2107854 2107894 -70045988 + (CA)n Simple_repeat Simple_repeat 1 40 0 286 325 104 32 chr20 2108293 2108447 -70045435 - MIR SINE MIR -24 238 74 242 339 64 0 chr20 2108432 2108541 -70045341 - L2 LINE L2 -2 3311 3196 * 1008 244 60 52 chr20 2108628 2109010 -70044872 - LTR37B LTR ERV1 -78 390 6 229 336 27 55 chr20 2109030 2109176 -70044706 - L2 LINE L2 -200 3072 2931 * 256 333 113 0 chr20 2109155 2109332 -70044550 + L2 LINE L2 2774 2970 -344 194 369 77 18 chr20 2109417 2109585 -70044297 + L2 LINE L2 3120 3297 -16 210 222 17 8 chr20 2109589 2109706 -70044176 + (TGGA)n Simple_repeat Simple_repeat 2 119 0 227 200 36 18 chr20 2109706 2109761 -70044121 + GA-rich Low_complexity Low_complexity 2 57 0 1514 131 120 29 chr20 2110795 2111069 -70042813 - AluJo SINE Alu -11 301 3 758 165 139 34 chr20 2111078 2111287 -70042595 + L1ME1 LINE L1 5928 6161 -5 769 259 47 14 chr20 2111309 2111521 -70042361 - MIR SINE MIR 0 262 44 186 320 20 0 chr20 2111548 2111598 -70042284 - MIR SINE MIR -111 97 47 218 305 38 30 chr20 2112405 2112519 -70041363 - MIR SINE MIR -87 121 8 828 264 9 27 chr20 2112564 2112784 -70041098 + MIR SINE MIR 32 247 -15 261 0 0 0 chr20 2112925 2112954 -70040928 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 443 256 128 95 chr20 2112994 2113116 -70040766 - L2 LINE L2 -74 3239 3122 1656 176 6 61 chr20 2113116 2113446 -70040436 + AluSx SINE Alu 1 312 0 443 256 128 95 chr20 2113446 2113628 -70040254 - L2 LINE L2 -191 3122 2925 226 278 0 14 chr20 2113997 2114069 -70039813 - L1MC/D LINE L1 -2031 5777 5707 2279 129 0 0 chr20 2115060 2115370 -70038512 - AluSx SINE Alu -2 310 1 380 332 94 47 chr20 2115441 2115676 -70038206 - MIR SINE MIR -2 260 15 613 165 112 41 chr20 2115984 2116154 -70037728 + MER53 DNA DNA 8 189 0 246 172 86 0 chr20 2116573 2116631 -70037251 + L2 LINE L2 2992 3054 -218 199 122 41 0 chr20 2116742 2116791 -70037091 + GA-rich Low_complexity Low_complexity 2 52 0 916 263 4 18 chr20 2116952 2117180 -70036702 + MIR SINE MIR 8 232 -30 361 259 184 49 chr20 2117417 2117602 -70036280 + MIR SINE MIR 37 246 -16 937 136 6 6 chr20 2117794 2117963 -70035919 + (GGAA)n Simple_repeat Simple_repeat 4 172 0 264 160 20 0 chr20 2117969 2118019 -70035863 + GA-rich Low_complexity Low_complexity 2 52 0 204 314 221 0 chr20 2118663 2118749 -70035133 - L2 LINE L2 -18 3295 3191 443 273 99 17 chr20 2118779 2118892 -70034990 + MER5A DNA MER1_type 4 137 -52 2492 37 40 3 chr20 2118892 2119191 -70034691 - AluY SINE Alu -1 310 1 443 273 99 17 chr20 2119191 2119249 -70034633 + MER5A DNA MER1_type 137 189 0 2127 133 7 7 chr20 2119342 2119644 -70034238 - AluSx SINE Alu -10 302 1 243 254 87 14 chr20 2119707 2119845 -70034037 - L1ME4a LINE L1 -29 6092 5945 2877 163 160 26 chr20 2119883 2120467 -70033415 + LTR48 LTR ERV1 1 694 -93 1690 193 3 25 chr20 2120467 2120783 -70033099 - AluJo SINE Alu -3 309 1 2877 163 160 26 chr20 2120783 2120892 -70032990 + LTR48 LTR ERV1 694 787 0 1018 166 44 0 chr20 2120898 2121079 -70032803 - MER5A DNA MER1_type 0 189 1 371 265 122 41 chr20 2121113 2121260 -70032622 + MIR SINE MIR 52 210 -52 763 281 83 17 chr20 2121389 2121730 -70032152 - L1ME4a LINE L1 -405 5716 5391 204 371 0 0 chr20 2121997 2122067 -70031815 - L2 LINE L2 -2 3270 3201 204 263 0 35 chr20 2122188 2122245 -70031637 + MIR SINE MIR 31 85 -177 3283 240 41 32 chr20 2122524 2122799 -70031083 + L1MEc LINE L1 247 518 -6089 1281 177 14 140 chr20 2122799 2122844 -70031038 + MLT1A1 LTR MaLR 1 50 -315 1719 182 10 23 chr20 2122844 2123146 -70030736 + AluJo SINE Alu 1 298 -14 1281 177 14 140 chr20 2123146 2123513 -70030369 + MLT1A1 LTR MaLR 50 361 -4 3283 240 41 32 chr20 2123513 2124355 -70029527 + L1MEc LINE L1 518 1455 -5152 236 230 27 0 chr20 2124392 2124466 -70029416 + L1MC4 LINE L1 6617 6692 -1350 180 0 0 0 chr20 2124474 2124494 -70029388 + (TA)n Simple_repeat Simple_repeat 2 21 0 302 200 75 0 chr20 2124507 2124587 -70029295 + L1MEc LINE L1 1455 1540 -4886 507 286 8 28 chr20 2124681 2124929 -70028953 + L1MEc LINE L1 1417 1659 -4767 1365 146 4 40 chr20 2124929 2125155 -70028727 + AluJb SINE Alu 87 304 -8 2770 192 25 27 chr20 2125156 2125829 -70028053 + L1MEc LINE L1 1849 2520 -4087 201 228 152 25 chr20 2126233 2126312 -70027570 - L3 LINE CR1 -1044 533 445 449 332 40 65 chr20 2126397 2126644 -70027238 - L2 LINE L2 0 3272 3032 360 279 89 32 chr20 2127460 2127650 -70026232 + L2 LINE L2 2840 3040 -232 246 231 0 0 chr20 2127899 2127964 -70025918 + GA-rich Low_complexity Low_complexity 1 65 0 285 247 12 0 chr20 2127974 2128055 -70025827 + (TGGA)n Simple_repeat Simple_repeat 4 85 0 314 284 6 0 chr20 2128073 2128249 -70025633 + (TGAA)n Simple_repeat Simple_repeat 4 180 0 23 0 0 0 chr20 2128269 2128292 -70025590 + AT_rich Low_complexity Low_complexity 1 23 0 415 216 0 0 chr20 2128409 2128483 -70025399 + L2 LINE L2 3240 3313 0 300 330 46 9 chr20 2128543 2128652 -70025230 + MIR SINE MIR 40 152 -56 3665 147 41 35 chr20 2128686 2129317 -70024565 - MER41B LTR ERV1 0 635 1 1570 177 126 49 chr20 2129533 2129963 -70023919 + MER31B LTR ERV1 2 464 -2 357 209 11 33 chr20 2130953 2131044 -70022838 - LTR16A1 LTR ERVL -128 329 241 950 290 21 39 chr20 2132352 2132622 -70021260 + MLT1J LTR MaLR 1 263 -248 2652 140 11 32 chr20 2132622 2133057 -70020825 + MSTB LTR MaLR 1 426 0 950 290 21 39 chr20 2133057 2133172 -70020710 + MLT1J LTR MaLR 263 379 -132 346 133 72 36 chr20 2133212 2133295 -70020587 + MLT1H LTR MaLR 38 123 -426 326 215 193 7 chr20 2133494 2133629 -70020253 + MLT1J LTR MaLR 382 541 -8 368 185 62 0 chr20 2133636 2133717 -70020165 + MLT1J LTR MaLR 389 474 -37 280 254 56 0 chr20 2134219 2134290 -70019592 + MIR SINE MIR 108 182 -80 522 276 45 49 chr20 2134396 2134581 -70019301 + L2 LINE L2 2830 3015 -298 2033 128 26 10 chr20 2134581 2134887 -70018995 - AluY SINE Alu 0 311 1 522 276 45 49 chr20 2134887 2134947 -70018935 + L2 LINE L2 3015 3074 -239 2193 146 39 3 chr20 2135010 2135402 -70018480 + L1MC2 LINE L1 5657 6088 -243 24 53 0 0 chr20 2135402 2135440 -70018442 + AT_rich Low_complexity Low_complexity 1 38 0 1107 191 103 39 chr20 2135459 2135714 -70018168 + L1MC2 LINE L1 6045 6282 -62 2144 108 21 0 chr20 2135714 2136000 -70017882 + AluSx SINE Alu 1 292 -20 1107 191 103 39 chr20 2136000 2136012 -70017870 + L1MC2 LINE L1 6282 6292 -52 2385 90 0 10 chr20 2136012 2136327 -70017555 - AluSq SINE Alu -1 312 6 1107 191 103 39 chr20 2136327 2136340 -70017542 + L1MC2 LINE L1 6292 6344 0 884 234 141 41 chr20 2136663 2137031 -70016851 - MER113 DNA MER1_type? -114 407 3 415 236 66 0 chr20 2137170 2137276 -70016606 + MER94 DNA DNA 2 114 -20 581 231 48 14 chr20 2138546 2138693 -70015189 + L2 LINE L2 2650 2801 -513 657 302 74 55 chr20 2138813 2139287 -70014595 + L2 LINE L2 2831 3313 0 186 125 62 0 chr20 2139390 2139422 -70014460 - MIR SINE MIR -112 150 117 455 285 44 7 chr20 2140421 2140558 -70013324 + L1ME3 LINE L1 6021 6162 0 555 268 91 25 chr20 2140693 2140891 -70012991 + MLT1K LTR MaLR 317 527 -61 345 265 140 7 chr20 2140986 2141122 -70012760 - MIR SINE MIR -89 173 20 292 259 70 49 chr20 2141303 2141446 -70012436 + Charlie8 DNA MER1_type 39 184 -2233 632 298 55 38 chr20 2141608 2141843 -70012039 + MLT1K LTR MaLR 25 263 -325 618 250 97 20 chr20 2141869 2142065 -70011817 + MLT1K LTR MaLR 320 530 -58 403 321 121 38 chr20 2142160 2142400 -70011482 + L3 LINE CR1 1311 1570 -7 602 283 86 54 chr20 2142408 2142687 -70011195 + L2 LINE L2 3024 3311 -2 658 269 90 0 chr20 2143076 2143232 -70010650 - MIR SINE MIR -12 250 81 279 0 0 0 chr20 2143315 2143346 -70010536 + (TG)n Simple_repeat Simple_repeat 2 32 0 249 33 0 0 chr20 2144733 2144763 -70009119 + (CTG)n Simple_repeat Simple_repeat 1 30 0 211 291 100 27 chr20 2145833 2145943 -70007939 - MIR3 SINE MIR -77 131 14 1918 146 0 0 chr20 2146339 2146660 -70007222 + AluSx SINE Alu 2 322 0 1868 154 0 0 chr20 2146673 2146966 -70006916 + AluSx SINE Alu 5 297 -15 348 308 110 14 chr20 2146985 2147131 -70006751 - MIR3 SINE MIR -45 163 4 199 224 35 17 chr20 2147914 2147972 -70005910 - MIR SINE MIR -63 145 87 333 314 152 21 chr20 2147989 2148180 -70005702 - MIR SINE MIR -19 243 28 675 281 62 31 chr20 2148506 2148766 -70005116 + L2 LINE L2 2828 3095 -177 834 275 83 54 chr20 2148870 2149277 -70004605 + L2 LINE L2 2895 3313 0 1922 151 0 0 chr20 2149312 2149604 -70004278 + AluSx SINE Alu 2 293 -19 398 272 49 22 chr20 2150216 2150362 -70003520 - MIR SINE MIR -50 212 64 722 278 58 0 chr20 2150802 2151007 -70002875 - MIR SINE MIR -44 218 2 190 297 119 0 chr20 2151084 2151185 -70002697 + L2 LINE L2 2643 2755 -559 503 311 42 32 chr20 2151234 2151424 -70002458 - MIR SINE MIR -3 259 68 426 232 101 116 chr20 2151489 2151696 -70002186 + L2 LINE L2 2902 3105 -167 258 322 91 10 chr20 2151738 2151937 -70001945 - L2 LINE L2 -367 2947 2733 279 0 0 0 chr20 2151943 2151974 -70001908 + (TGAA)n Simple_repeat Simple_repeat 4 34 0 414 248 0 44 chr20 2152047 2152160 -70001722 + Charlie8 DNA MER1_type 87 194 -2223 655 275 66 37 chr20 2152355 2152572 -70001310 + MIR SINE MIR 16 241 -21 482 306 35 30 chr20 2152780 2152979 -70000903 - MIR SINE MIR -3 259 60 497 196 9 54 chr20 2153505 2153617 -70000265 + MLT2D LTR ERVL 307 413 -1 704 222 7 7 chr20 2153618 2153762 -70000120 + MER58B DNA MER1_type 194 337 -4 257 322 30 26 chr20 2154375 2154511 -69999371 - MIR SINE MIR -61 147 19 205 266 119 46 chr20 2154621 2154730 -69999152 - MIR SINE MIR -90 172 56 283 343 56 11 chr20 2154777 2154955 -69998927 - MIR SINE MIR -37 225 40 303 322 0 0 chr20 2155435 2155628 -69998254 + GA-rich Low_complexity Low_complexity 1 193 0 341 272 20 20 chr20 2155642 2155789 -69998093 + GA-rich Low_complexity Low_complexity 1 147 0 653 266 99 21 chr20 2156753 2156945 -69996937 - MIR SINE MIR -8 254 48 203 272 49 37 chr20 2156939 2157020 -69996862 - L2 LINE L2 -41 3272 3191 * 189 0 0 0 chr20 2157747 2157768 -69996114 + (T)n Simple_repeat Simple_repeat 1 21 0 263 272 52 35 chr20 2159060 2159089 -69994793 + (CAGAGA)n Simple_repeat Simple_repeat 4 31 -148 204 40 0 0 chr20 2159089 2159114 -69994768 + (GA)n Simple_repeat Simple_repeat 2 26 0 263 272 52 35 chr20 2159114 2159257 -69994625 + (CAGAGA)n Simple_repeat Simple_repeat 31 179 0 * 327 330 0 0 chr20 2159157 2159340 -69994542 + GA-rich Low_complexity Low_complexity 1 183 0 459 303 52 7 chr20 2159917 2160072 -69993810 - MIR SINE MIR -73 189 28 448 313 49 0 chr20 2160328 2160491 -69993391 + MIR SINE MIR 49 219 -43 333 0 0 0 chr20 2161460 2161497 -69992385 + (CA)n Simple_repeat Simple_repeat 2 38 0 188 268 61 61 chr20 2161633 2161715 -69992167 + MIR SINE MIR 37 118 -144 649 309 36 0 chr20 2161959 2162211 -69991671 - MIR SINE MIR 0 262 2 183 205 0 0 chr20 2162513 2162552 -69991330 + CT-rich Low_complexity Low_complexity 2 40 0 681 293 40 63 chr20 2162556 2162935 -69990947 - L2 LINE L2 -5 3267 2898 996 263 186 21 chr20 2162975 2163115 -69990767 + L2 LINE L2 2553 2669 -644 2217 120 0 0 chr20 2163115 2163424 -69990458 + AluSq SINE Alu 1 309 -4 996 263 186 21 chr20 2163424 2163924 -69989958 + L2 LINE L2 2669 3311 -2 214 304 59 29 chr20 2163930 2164032 -69989850 - L2 LINE L2 -413 2901 2797 242 333 128 55 chr20 2164148 2164367 -69989515 - L2 LINE L2 -51 3221 2987 1939 207 30 62 chr20 2164403 2164607 -69989275 + L1MB4 LINE L1 5495 5704 -476 201 74 0 0 chr20 2164607 2164634 -69989248 + (CAT)n Simple_repeat Simple_repeat 1 27 0 390 227 0 0 chr20 2164637 2164703 -69989179 - AluJ/FRAM SINE Alu -16 286 221 716 188 8 0 chr20 2164710 2164857 -69989025 - FLAM_C SINE Alu 0 148 1 1939 207 30 62 chr20 2164857 2165267 -69988615 + L1MB4 LINE L1 5712 6096 -84 673 301 55 17 chr20 2165341 2165577 -69988305 - MIR SINE MIR -6 256 12 509 281 69 31 chr20 2165628 2165870 -69988012 - MIR SINE MIR -13 249 3 685 262 109 9 chr20 2166169 2166390 -69987492 - MIR SINE MIR 0 262 20 398 335 51 51 chr20 2166695 2166970 -69986912 - L2 LINE L2 -4 3268 2994 254 383 17 0 chr20 2167410 2167525 -69986357 - LTR67 LTR ERVL -361 196 80 297 259 177 13 chr20 2167742 2167900 -69985982 - MIR3 SINE MIR -19 189 6 543 280 64 13 chr20 2167985 2168142 -69985740 + MIR SINE MIR 20 184 -78 202 369 6 0 chr20 2168471 2168631 -69985251 + (CA)n Simple_repeat Simple_repeat 2 162 0 207 0 0 0 chr20 2168895 2168918 -69984964 + (TC)n Simple_repeat Simple_repeat 2 24 0 194 289 18 97 chr20 2169256 2169350 -69984532 + MIR SINE MIR 49 133 -75 975 227 80 17 chr20 2169350 2169588 -69984294 + MIR SINE MIR 2 254 -8 1232 288 107 11 chr20 2169663 2170101 -69983781 + L2 LINE L2 2834 3313 0 189 204 20 20 chr20 2170757 2170806 -69983076 - L2 LINE L2 0 3272 3224 411 317 10 0 chr20 2171048 2171152 -69982730 + L2 LINE L2 3168 3272 0 370 291 101 19 chr20 2171157 2171315 -69982567 - MIR SINE MIR -77 185 15 283 287 82 66 chr20 2171377 2171499 -69982383 + MIR3 SINE MIR 56 179 -29 393 341 36 0 chr20 2172413 2172551 -69981331 + MIR3 SINE MIR 21 163 -45 1141 223 125 19 chr20 2172561 2173037 -69980845 - MLT1G LTR MaLR -2 593 1 420 299 105 83 chr20 2173119 2173629 -69980253 + L2 LINE L2 2750 3267 -5 705 322 110 45 chr20 2174039 2174945 -69978937 - L2 LINE L2 -35 3237 2268 223 368 128 16 chr20 2175176 2175301 -69978581 + L3 LINE CR1 1422 1560 -17 236 203 68 0 chr20 2175369 2175428 -69978454 + MIR3 SINE MIR 119 181 -27 355 313 201 0 chr20 2175435 2175713 -69978169 + L2 LINE L2 1872 2205 -1109 438 20 0 0 chr20 2175921 2175972 -69977910 + (TC)n Simple_repeat Simple_repeat 2 52 0 4583 226 55 55 chr20 2176171 2176999 -69976883 + L1ME1 LINE L1 785 1612 -4794 1616 204 0 0 chr20 2176999 2177288 -69976594 + AluJo SINE Alu 1 289 -23 4583 226 55 55 chr20 2177288 2177677 -69976205 + L1ME1 LINE L1 1612 2000 -4406 2021 129 0 16 chr20 2177677 2177994 -69975888 + AluSx SINE Alu 1 312 0 4583 226 55 55 chr20 2177994 2179816 -69974066 + L1ME1 LINE L1 2000 3798 -2608 6450 159 35 9 chr20 2179839 2180182 -69973700 + Tigger3b DNA MER2_type 1 334 -2694 2348 35 3 7 chr20 2180182 2180523 -69973359 + AluY SINE Alu 1 311 0 6450 159 35 9 chr20 2180523 2180873 -69973009 + Tigger3b DNA MER2_type 334 673 -2355 2212 91 10 3 chr20 2180873 2181182 -69972700 + AluSp SINE Alu 1 311 -2 6450 159 35 9 chr20 2181182 2181687 -69972195 + Tigger3b DNA MER2_type 673 1231 0 261 167 0 0 chr20 2181708 2181762 -69972120 + (CA)n Simple_repeat Simple_repeat 1 54 0 5274 226 81 12 chr20 2181774 2183452 -69970430 + L1ME1 LINE L1 4052 5827 -599 859 286 71 15 chr20 2183461 2183800 -69970082 + L1ME1 LINE L1 6019 6376 -50 1048 209 136 33 chr20 2183840 2184171 -69969711 + HAL1b LINE L1 438 802 -546 1076 157 0 40 chr20 2184172 2184370 -69969512 + AluJo SINE Alu 84 273 -39 584 250 56 10 chr20 2184393 2184589 -69969293 + HAL1b LINE L1 792 996 -352 * 1240 194 17 35 chr20 2184580 2184868 -69969014 - L1MD3 LINE L1 -1 7994 7712 319 250 93 58 chr20 2184926 2185098 -69968784 - MLT1J LTR MaLR -331 180 3 208 385 16 0 chr20 2185140 2185262 -69968620 - L2 LINE L2 -747 2567 2444 374 175 10 97 chr20 2185379 2185482 -69968400 - MIR SINE MIR 0 262 169 340 291 0 0 chr20 2185487 2185566 -69968316 + L2 LINE L2 3219 3297 -16 265 200 0 18 chr20 2185591 2185646 -69968236 - MIR SINE MIR -112 150 97 574 286 127 55 chr20 2185804 2186098 -69967784 + L2 LINE L2 2776 3121 -192 2310 55 0 0 chr20 2186098 2186414 -69967468 - AluY SINE Alu 0 311 1 574 286 127 55 chr20 2186414 2186623 -69967259 + L2 LINE L2 3121 3313 0 191 258 0 31 chr20 2186629 2186757 -69967125 + (TGGA)n Simple_repeat Simple_repeat 4 127 0 271 287 22 44 chr20 2187355 2187491 -69966391 - L2 LINE L2 -4 3268 3136 532 239 71 92 chr20 2187508 2187747 -69966135 + MIR SINE MIR 14 247 -15 705 238 26 43 chr20 2187766 2187997 -69965885 - MIR SINE MIR -4 258 32 652 255 22 11 chr20 2188411 2188595 -69965287 - MIR SINE MIR -67 195 10 254 287 66 30 chr20 2188594 2188761 -69965121 - MIR SINE MIR -39 223 51 * 209 263 53 0 chr20 2189625 2189701 -69964181 + MER5B DNA MER1_type 52 131 -47 250 267 0 81 chr20 2189778 2189864 -69964018 + L2 LINE L2 3026 3104 -168 256 241 0 0 chr20 2190328 2190386 -69963496 + MLT1K LTR MaLR 196 253 -335 401 87 43 0 chr20 2190403 2190472 -69963410 - L1MA8 LINE L1 -2 6289 6218 462 168 32 0 chr20 2190584 2190678 -69963204 - MER2 DNA MER2_type -139 206 110 7904 158 101 20 chr20 2190678 2192223 -69961659 - MER52A LTR ERV1 0 1755 1 517 214 8 26 chr20 2192221 2192241 -69961641 - MER2 DNA MER2_type -230 115 96 * 1391 177 79 37 chr20 2192241 2192569 -69961313 + MER2 DNA MER2_type 2 343 -1 517 214 8 26 chr20 2192569 2192665 -69961217 - MER2 DNA MER2_type -249 96 1 3318 142 25 30 chr20 2192665 2193258 -69960624 - L1MA8 LINE L1 -70 6221 5632 487 297 38 71 chr20 2193334 2193600 -69960282 + MLT1K LTR MaLR 329 585 -3 1812 247 77 38 chr20 2193963 2194522 -69959360 - MLT1G LTR MaLR 0 590 10 1226 250 56 22 chr20 2194657 2195017 -69958865 - MLT1K LTR MaLR -1 587 216 813 276 99 38 chr20 2195068 2195535 -69958347 - L1ME4a LINE L1 -204 5917 5417 2330 96 0 7 chr20 2195535 2195838 -69958044 - AluSc SINE Alu -8 301 1 813 276 99 38 chr20 2195838 2195867 -69958015 - L1ME4a LINE L1 -704 5417 5391 279 198 49 49 chr20 2196590 2196671 -69957211 - MIR SINE MIR -95 167 87 270 0 0 0 chr20 2196895 2196925 -69956957 + (CA)n Simple_repeat Simple_repeat 1 30 0 601 274 87 10 chr20 2197350 2197558 -69956324 + MLT1K LTR MaLR 363 586 -2 715 312 64 11 chr20 2197706 2197988 -69955894 + HAL1 LINE L1 32 328 -2179 373 202 65 40 chr20 2198090 2198214 -69955668 + HAL1 LINE L1 615 741 -1766 880 248 103 78 chr20 2198402 2199031 -69954851 + L1MC4 LINE L1 7168 7808 0 539 248 35 0 chr20 2199080 2199221 -69954661 + MIR SINE MIR 91 236 -26 234 264 178 61 chr20 2199460 2199657 -69954225 + MLT1K LTR MaLR 62 281 -307 714 241 92 11 chr20 2200193 2200438 -69953444 + MIR SINE MIR 6 262 0 194 304 98 0 chr20 2200467 2200579 -69953303 - L2 LINE L2 -13 3259 3137 311 269 46 8 chr20 2201018 2201148 -69952734 + (TGGA)n Simple_repeat Simple_repeat 4 138 0 408 223 62 0 chr20 2201164 2201482 -69952400 + (TGGA)n Simple_repeat Simple_repeat 1 337 0 414 300 132 14 chr20 2201608 2201828 -69952054 - MIR SINE MIR 0 262 17 181 278 256 0 chr20 2201890 2201980 -69951902 - L2 LINE L2 -215 3057 2945 748 227 20 10 chr20 2202127 2202330 -69951552 - MIR SINE MIR -56 206 2 362 292 18 9 chr20 2202612 2202725 -69951157 + MIR3 SINE MIR 81 194 -14 787 255 123 13 chr20 2203294 2203529 -69950353 + MIR SINE MIR 2 262 0 589 198 16 0 chr20 2203620 2203741 -69950141 + MER5A DNA MER1_type 44 166 -23 214 224 168 37 chr20 2203813 2203920 -69949962 + MIR SINE MIR 76 196 -66 230 238 167 0 chr20 2204139 2204223 -69949659 + MIR SINE MIR 94 191 -71 334 264 66 0 chr20 2204244 2204350 -69949532 - L2 LINE L2 -21 3251 3139 1886 143 7 32 chr20 2204572 2204880 -69949002 - AluSx SINE Alu -12 300 1 185 338 38 12 chr20 2204913 2204993 -69948889 - L2 LINE L2 -544 2770 2689 2247 103 0 3 chr20 2205000 2205292 -69948590 + AluSx SINE Alu 5 295 -17 877 236 41 5 chr20 2205301 2205496 -69948386 + L1ME1 LINE L1 5471 5672 -494 1645 145 44 29 chr20 2205496 2206037 -69947845 + LTR36 LTR ERV1 1 611 0 1755 206 7 119 chr20 2206041 2206586 -69947296 + L1ME1 LINE L1 5671 6154 -12 252 241 80 9 chr20 2206633 2206745 -69947137 - L2 LINE L2 -674 2640 2521 368 316 129 0 chr20 2207296 2207451 -69946431 + MIR3 SINE MIR 13 187 -21 937 205 0 11 chr20 2207715 2207900 -69945982 + MER3 DNA MER1_type 2 184 -25 1064 247 11 127 chr20 2207942 2208469 -69945413 + LTR41 LTR ERVL 1 466 -307 1104 206 24 69 chr20 2208512 2208834 -69945048 + LTR41 LTR ERVL 468 795 0 683 317 63 59 chr20 2209158 2210086 -69943796 + ERVL LTR ERVL 412 1344 -4310 * 1585 273 16 16 chr20 2210084 2210522 -69943360 + ERVL LTR ERVL 4883 5321 -438 1705 178 7 7 chr20 2210522 2210803 -69943079 + AluJb SINE Alu 1 281 -31 1569 248 79 60 chr20 2211229 2211761 -69942121 + MLT1E LTR MaLR 1 542 -51 3783 194 49 11 chr20 2211793 2212587 -69941295 - L1MB7 LINE L1 -54 6130 5267 2234 127 3 0 chr20 2212587 2212894 -69940988 - AluSq SINE Alu -5 308 1 3783 194 49 11 chr20 2212894 2213449 -69940433 - L1MB7 LINE L1 -917 5267 4734 1003 194 60 187 chr20 2213518 2214272 -69939610 + LTR41 LTR ERVL 6 663 -110 1685 162 20 37 chr20 2214464 2214760 -69939122 - AluJo SINE Alu -21 291 1 2332 106 6 0 chr20 2214771 2215082 -69938800 - AluSq SINE Alu 0 313 1 1390 250 142 7 chr20 2215168 2215584 -69938298 - LTR16C LTR ERVL 0 491 20 244 182 45 45 chr20 2215593 2215659 -69938223 + MIR SINE MIR 112 177 -85 272 265 154 0 chr20 2215858 2215994 -69937888 - MIR SINE MIR -102 160 4 620 179 9 0 chr20 2216684 2216787 -69937095 + MLT1J1 LTR MaLR 13 116 -330 620 240 137 6 chr20 2216787 2216970 -69936912 + MER63B DNA MER1_type 1 207 -229 1014 303 17 7 chr20 2217038 2217332 -69936550 - LTR16A LTR ERVL -32 418 122 342 282 9 9 chr20 2217398 2217508 -69936374 - MIR SINE MIR -85 177 68 364 232 9 27 chr20 2217655 2217767 -69936115 - MARNA DNA Mariner -170 416 307 295 240 44 12 chr20 2217933 2218024 -69935858 + MIR SINE MIR 61 152 -61 685 282 70 25 chr20 2218041 2218282 -69935600 + MIR SINE MIR 8 259 -3 1870 259 57 18 chr20 2218392 2218887 -69934995 - MLT1G1 LTR MaLR -9 586 73 378 260 30 0 chr20 2219240 2219340 -69934542 + MIR SINE MIR 90 192 -70 416 165 89 101 chr20 2219566 2219724 -69934158 + L1ME4a LINE L1 5955 6110 -11 324 70 0 0 chr20 2219726 2219769 -69934113 + (CA)n Simple_repeat Simple_repeat 2 44 0 316 269 112 14 chr20 2219842 2219994 -69933888 - MER20B DNA MER1_type 0 219 53 295 283 173 37 chr20 2219996 2220187 -69933695 + L1MC4 LINE L1 7800 8016 -26 2404 65 0 14 chr20 2220864 2221156 -69932726 + AluY SINE Alu 1 288 -23 252 185 0 19 chr20 2221160 2221214 -69932668 - L2 LINE L2 -13 3259 3207 1972 232 23 0 chr20 2221449 2221876 -69932006 + MER110 LTR ERV1 46 482 -9 301 276 163 0 chr20 2221890 2222013 -69931869 - MIR SINE MIR -23 239 97 5874 101 3 27 chr20 2222013 2222160 -69931722 + L1PA11 LINE L1 5329 5478 -696 1459 214 3 35 chr20 2222160 2222478 -69931404 + AluJb SINE Alu 1 308 -4 5874 101 3 27 chr20 2222478 2223189 -69930693 + L1PA11 LINE L1 5478 6167 -7 328 250 0 0 chr20 2223189 2223273 -69930609 - MIR SINE MIR -163 99 16 1690 251 135 15 chr20 2223295 2223820 -69930062 - MLT1G1 LTR MaLR -7 588 1 580 296 97 8 chr20 2224026 2224448 -69929434 + LTR33 LTR ERVL 19 521 0 251 346 0 12 chr20 2224539 2224620 -69929262 - L2 LINE L2 -211 3061 2982 356 175 32 0 chr20 2224647 2224710 -69929172 - MIR SINE MIR -67 141 77 1213 209 106 9 chr20 2224915 2225236 -69928646 + L1ME3 LINE L1 4497 4848 -1298 1720 158 17 31 chr20 2225355 2225647 -69928235 + AluJo SINE Alu 12 299 -13 478 247 67 3 chr20 2225648 2225843 -69928039 + L1ME3 LINE L1 5771 5979 -183 2940 147 33 0 chr20 2225847 2226338 -69927544 + L1MB2 LINE L1 5319 5825 -346 5189 53 0 3 chr20 2226340 2226979 -69926903 + L1PA8 LINE L1 5536 6172 0 1890 161 14 11 chr20 2226979 2227326 -69926556 + L1MB2 LINE L1 5821 6169 -2 823 176 12 18 chr20 2227368 2227533 -69926349 + L1ME3 LINE L1 5998 6161 -1 670 277 106 25 chr20 2227546 2227828 -69926054 - MLT1L LTR MaLR -153 462 158 2085 113 7 0 chr20 2227885 2228215 -69925667 - AluSx SINE Alu 0 332 1 2305 88 3 3 chr20 2228715 2229010 -69924872 - AluSc SINE Alu -14 295 1 332 259 75 58 chr20 2229015 2229189 -69924693 - MER5B DNA MER1_type -1 177 1 2126 99 8 74 chr20 2229414 2229767 -69924115 + MER1B DNA MER1_type 1 330 -9 621 241 128 5 chr20 2229768 2229955 -69923927 + MLT1L LTR MaLR 400 609 -6 1310 191 40 20 chr20 2229959 2230211 -69923671 - AluJo SINE Alu -54 258 2 23 54 0 0 chr20 2230270 2230307 -69923575 + AT_rich Low_complexity Low_complexity 1 37 0 2136 139 0 0 chr20 2230385 2230680 -69923202 + AluSx SINE Alu 1 295 -17 888 245 64 19 chr20 2231303 2231568 -69922314 - L1ME4a LINE L1 -296 5825 5549 1074 149 11 0 chr20 2232121 2232302 -69921580 + L1MB3 LINE L1 6001 6183 0 11684 176 46 56 chr20 2232316 2234552 -69919330 + L1MC1 LINE L1 19 2276 -4150 2254 165 41 10 chr20 2234552 2234965 -69918917 - MSTA LTR MaLR 0 428 3 11684 176 46 56 chr20 2234965 2235185 -69918697 + L1MC1 LINE L1 2276 2497 -3929 2316 97 3 3 chr20 2235185 2235485 -69918397 + AluSg SINE Alu 2 301 -9 11684 176 46 56 chr20 2235485 2235635 -69918247 + L1MC1 LINE L1 2497 2647 -3779 2215 118 0 3 chr20 2235635 2235932 -69917950 + AluSc SINE Alu 1 296 -13 11684 176 46 56 chr20 2235932 2236124 -69917758 + L1MC1 LINE L1 2647 2839 -3587 2011 155 7 0 chr20 2236124 2236434 -69917448 + AluJo SINE Alu 1 312 0 11684 176 46 56 chr20 2236434 2236705 -69917177 + L1MC1 LINE L1 2839 3111 -3315 2304 104 3 0 chr20 2236705 2237002 -69916880 + AluSp SINE Alu 1 298 -15 11684 176 46 56 chr20 2237002 2237276 -69916606 + L1MC1 LINE L1 3111 3386 -3040 2162 137 0 3 chr20 2237276 2237583 -69916299 + AluSx SINE Alu 1 306 -6 11684 176 46 56 chr20 2237583 2237786 -69916096 + L1MC1 LINE L1 3386 3590 -2836 2216 112 0 7 chr20 2237786 2238089 -69915793 + AluSg SINE Alu 1 301 -9 11684 176 46 56 chr20 2238089 2238430 -69915452 + L1MC1 LINE L1 3590 3853 -2573 1714 168 0 30 chr20 2238440 2238920 -69914962 + AluJo SINE Alu 7 477 0 1637 223 216 59 chr20 2238955 2239367 -69914515 + L1MC1 LINE L1 3843 4189 -2237 816 161 23 0 chr20 2239367 2239497 -69914385 + FLAM_A SINE Alu 1 133 0 1637 223 216 59 chr20 2239497 2240072 -69913810 + L1MC1 LINE L1 4189 4985 -1441 235 229 16 0 chr20 2240085 2240146 -69913736 + L1MC1 LINE L1 4961 5022 -1404 542 138 0 0 chr20 2240163 2240243 -69913639 + FRAM SINE Alu 35 114 -62 315 0 0 0 chr20 2240592 2240627 -69913255 + (CA)n Simple_repeat Simple_repeat 2 36 0 6442 171 16 28 chr20 2240630 2242235 -69911647 + L1MC1 LINE L1 5023 6613 0 561 30 0 0 chr20 2242275 2242342 -69911540 + (TA)n Simple_repeat Simple_repeat 1 67 0 1287 107 6 0 chr20 2242342 2242520 -69911362 - AluSq SINE Alu -1 312 134 2271 48 25 67 chr20 2242520 2242835 -69911047 - AluY SINE Alu -9 302 1 2296 111 0 0 chr20 2242974 2243280 -69910602 + AluSg SINE Alu 1 306 -4 342 307 24 8 chr20 2243596 2243723 -69910159 - LTR67 LTR ERVL -2 555 427 248 291 45 55 chr20 2243825 2243935 -69909947 + LTR16C LTR ERVL 87 195 -296 598 267 46 20 chr20 2243977 2244172 -69909710 + LTR16C LTR ERVL 284 483 -8 526 292 36 105 chr20 2244174 2244612 -69909270 - LTR67 LTR ERVL -126 431 24 336 368 23 18 chr20 2245129 2245300 -69908582 - L2 LINE L2 -214 3058 2887 589 292 103 80 chr20 2245554 2246263 -69907619 - HAL1 LINE L1 -1606 901 177 319 137 0 95 chr20 2246424 2246519 -69907363 + L1MB2 LINE L1 6082 6167 -4 819 201 0 0 chr20 2246706 2246850 -69907032 + MER5A DNA MER1_type 9 152 -37 462 303 31 6 chr20 2247021 2247183 -69906699 - MIR SINE MIR -5 257 92 2352 98 0 0 chr20 2247252 2247547 -69906335 - AluSc SINE Alu -14 295 1 211 296 31 31 chr20 2247619 2247717 -69906165 + L2 LINE L2 2979 3076 -196 4998 180 67 22 chr20 2247805 2247917 -69905965 + L1MD2 LINE L1 4921 5027 -1332 1734 173 3 26 chr20 2247917 2248224 -69905658 - AluJo SINE Alu -12 300 1 4998 180 67 22 chr20 2248224 2248666 -69905216 + L1MD2 LINE L1 5027 5448 -911 2350 99 0 0 chr20 2248666 2248959 -69904923 + AluSx SINE Alu 1 293 -19 4998 180 67 22 chr20 2248959 2249679 -69904203 + L1MD2 LINE L1 5448 6252 -107 401 113 32 0 chr20 2249718 2249780 -69904102 + L1MC/D LINE L1 5504 5567 -675 521 105 47 0 chr20 2249785 2249871 -69904011 + L1MD2 LINE L1 6266 6355 -4 1688 168 67 101 chr20 2249872 2250186 -69903696 - Charlie1b DNA MER1_type -2289 472 178 1334 184 21 0 chr20 2250186 2250420 -69903462 - MER8 DNA MER2_type 0 239 1 1688 168 67 101 chr20 2250420 2250581 -69903301 - Charlie1b DNA MER1_type -2583 178 13 210 178 22 0 chr20 2250640 2250685 -69903197 + L2 LINE L2 3188 3233 -39 213 132 0 0 chr20 2250687 2250725 -69903157 + (GA)n Simple_repeat Simple_repeat 2 39 0 727 313 144 18 chr20 2251543 2251882 -69902000 - MLT1J LTR MaLR -31 480 99 802 144 83 72 chr20 2252091 2252215 -69901667 - MER5A DNA MER1_type 0 189 61 2251 105 13 3 chr20 2252215 2252521 -69901361 - AluSc SINE Alu 0 309 1 802 144 83 72 chr20 2252521 2252577 -69901305 - MER5A DNA MER1_type -128 61 7 807 269 96 15 chr20 2252975 2253310 -69900572 + L1MC4a LINE L1 5455 5816 -1992 250 241 0 72 chr20 2253397 2253480 -69900402 + L1MC4a LINE L1 6057 6133 -1675 282 255 217 0 chr20 2253522 2253628 -69900254 - MIR SINE MIR -37 225 97 749 232 24 6 chr20 2253648 2253812 -69900070 + MER63A DNA MER1_type 39 205 -5 368 254 55 9 chr20 2254257 2254367 -69899515 + MIR SINE MIR 36 150 -112 2152 116 30 3 chr20 2254420 2254721 -69899161 + AluJb SINE Alu 1 309 -3 22 0 0 0 chr20 2255369 2255391 -69898491 + AT_rich Low_complexity Low_complexity 1 22 0 2470 78 0 13 chr20 2255712 2256021 -69897861 - AluSx SINE Alu -7 305 1 569 223 157 6 chr20 2256022 2256188 -69897694 + MIR SINE MIR 72 262 0 270 328 141 8 chr20 2256205 2256333 -69897549 + L2 LINE L2 3119 3263 -9 204 271 0 0 chr20 2256597 2256645 -69897237 + L2 LINE L2 3266 3313 0 603 272 59 25 chr20 2256895 2257134 -69896748 + MIR SINE MIR 15 261 -1 443 244 80 63 chr20 2257292 2257341 -69896541 - L1ME LINE L1 -352 5769 5722 189 0 0 0 chr20 2257341 2257362 -69896520 + (TA)n Simple_repeat Simple_repeat 2 22 0 443 244 80 63 chr20 2257362 2257550 -69896332 - L1ME LINE L1 -399 5722 5528 237 269 15 0 chr20 2257971 2258038 -69895844 - MER113 DNA MER1_type? 0 521 454 1051 200 130 82 chr20 2258139 2258639 -69895243 - HAL1 LINE L1 -4 2503 1980 787 211 5 52 chr20 2258708 2258902 -69894980 + MER5A DNA MER1_type 2 186 -3 324 357 23 29 chr20 2258908 2259018 -69894864 + MIR SINE MIR 12 122 -140 1909 153 7 0 chr20 2259018 2259312 -69894570 - AluSx SINE Alu -16 296 1 324 357 23 29 chr20 2259312 2259372 -69894510 + MIR SINE MIR 122 181 -81 211 133 0 0 chr20 2260043 2260073 -69893809 + L2 LINE L2 3222 3251 -21 585 273 134 34 chr20 2260081 2260374 -69893508 + L2 LINE L2 2782 3044 -269 2394 95 3 0 chr20 2260374 2260678 -69893204 - AluSp SINE Alu -8 305 1 585 273 134 34 chr20 2260678 2260879 -69893003 + L2 LINE L2 3044 3311 -2 1974 136 3 32 chr20 2261053 2261361 -69892521 + AluSx SINE Alu 1 299 -13 361 212 195 0 chr20 2261601 2261719 -69892163 + MIR SINE MIR 120 260 -2 1716 119 50 26 chr20 2261905 2262207 -69891675 + L1PA16 LINE L1 5849 6157 -9 1475 128 144 4 chr20 2262223 2262473 -69891409 + AluJb SINE Alu 1 285 -17 22 35 0 0 chr20 2262710 2262739 -69891143 + AT_rich Low_complexity Low_complexity 1 29 0 481 245 98 0 chr20 2262768 2262911 -69890971 - L1ME2 LINE L1 -114 6050 5894 1777 220 89 55 chr20 2262927 2263532 -69890350 - L1ME1 LINE L1 -5 6161 5536 291 346 55 0 chr20 2263546 2263673 -69890209 + L2 LINE L2 2912 3045 -268 737 112 16 48 chr20 2263673 2263798 -69890084 + MLT1B LTR MaLR 1 121 -269 4723 108 21 16 chr20 2263802 2264565 -69889317 + L1 LINE L1 3870 4636 -1510 1314 210 45 13 chr20 2264589 2264899 -69888983 + L1MC4 LINE L1 7165 7484 -558 1806 169 51 30 chr20 2264944 2265377 -69888505 + L1MC4 LINE L1 7470 7911 -131 246 105 18 73 chr20 2265378 2265443 -69888439 - L1M1 LINE L1 -603 5702 5641 231 250 70 23 chr20 2265477 2265605 -69888277 + L1MC4 LINE L1 7903 8036 -6 230 241 17 0 chr20 2265796 2265854 -69888028 - MIR SINE MIR -122 140 82 369 300 50 8 chr20 2265860 2265980 -69887902 + L2 LINE L2 3179 3303 -10 253 278 2 64 chr20 2266148 2266279 -69887603 - MIR SINE MIR -52 156 33 23 0 0 0 chr20 2267661 2267684 -69886198 + GC_rich Low_complexity Low_complexity 1 23 0 1828 156 0 13 chr20 2269565 2269867 -69884015 + AluJb SINE Alu 1 298 -14 248 305 130 19 chr20 2270182 2270336 -69883546 + MIR SINE MIR 2 172 -90 272 254 0 0 chr20 2270931 2270990 -69882892 - MIR3 SINE MIR -17 191 133 235 382 76 8 chr20 2271544 2271675 -69882207 - MIR3 SINE MIR -29 179 40 520 296 25 6 chr20 2272669 2272831 -69881051 - MIR SINE MIR -96 166 2 2224 97 7 3 chr20 2272921 2273220 -69880662 + AluSx SINE Alu 1 300 -12 281 349 72 12 chr20 2274150 2274316 -69879566 - MIR SINE MIR -70 192 17 294 306 82 14 chr20 2274404 2274551 -69879331 - MIR SINE MIR -36 226 70 230 222 37 0 chr20 2275621 2275675 -69878207 + MIR SINE MIR 92 147 -115 248 267 151 20 chr20 2275930 2276076 -69877806 + MER104 DNA Tc2 4 168 -12 1640 161 20 26 chr20 2276107 2276412 -69877470 + AluJo SINE Alu 1 303 -9 187 256 36 88 chr20 2277218 2277355 -69876527 + MIR3 SINE MIR 14 143 -65 1419 218 45 16 chr20 2277609 2277917 -69875965 - ERVL LTR ERVL -3552 2212 1896 24 32 0 0 chr20 2278026 2278057 -69875825 + AT_rich Low_complexity Low_complexity 1 31 0 199 239 0 0 chr20 2278562 2278608 -69875274 - MIR SINE MIR -78 130 85 211 365 0 14 chr20 2278662 2278736 -69875146 - MIR SINE MIR -120 88 16 685 181 0 0 chr20 2279029 2279145 -69874737 + FRAM SINE Alu 38 153 -23 2081 129 0 29 chr20 2282130 2282439 -69871443 - AluSx SINE Alu -12 300 1 198 229 0 21 chr20 2282610 2282658 -69871224 - L2 LINE L2 -212 3060 3014 386 250 122 11 chr20 2282832 2283020 -69870862 - L1ME4a LINE L1 -237 5884 5676 2111 56 0 8 chr20 2283039 2283290 -69870592 + AluY SINE Alu 47 295 -16 1561 117 20 137 chr20 2283318 2283712 -69870170 + MER7A DNA MER2_type 1 346 0 186 379 11 11 chr20 2283714 2283801 -69870081 - L2 LINE L2 -50 3222 3136 1662 239 195 31 chr20 2285365 2286626 -69867256 - L2 LINE L2 0 3313 1791 462 216 60 0 chr20 2286626 2286742 -69867140 - Charlie1 DNA MER1_type 0 2761 2639 1939 138 7 7 chr20 2286744 2287041 -69866841 + AluSx SINE Alu 1 297 -15 373 298 21 7 chr20 2287242 2287383 -69866499 + MIR SINE MIR 50 192 -70 310 260 104 0 chr20 2288693 2288789 -69865093 - MIR SINE MIR -155 107 2 659 193 139 6 chr20 2292739 2292905 -69860977 + MER5A DNA MER1_type 1 188 -1 2081 96 59 0 chr20 2293546 2293817 -69860065 - AluSc SINE Alu -22 287 1 196 211 0 0 chr20 2293874 2293912 -69859970 - L2 LINE L2 -9 3263 3226 189 394 56 0 chr20 2293964 2294106 -69859776 + MIR SINE MIR 107 256 -6 304 161 32 0 chr20 2294432 2294494 -69859388 - L2 LINE L2 -252 3061 2998 357 293 160 26 chr20 2294567 2294874 -69859008 - L2 LINE L2 -625 2689 2342 2391 99 108 214 chr20 2295737 2296026 -69857856 - Tigger3(Golem) DNA MER2_type -3 3026 2708 812 153 0 8 chr20 2296026 2296150 -69857732 + FLAM_C SINE Alu 1 123 -20 2391 99 108 214 chr20 2296150 2296430 -69857452 - Tigger3(Golem) DNA MER2_type -321 2708 2433 588 211 75 14 chr20 2296430 2296577 -69857305 - FAM SINE Alu -19 156 1 2391 99 108 214 chr20 2296577 2296709 -69857173 - Tigger3(Golem) DNA MER2_type -596 2433 2289 211 353 0 12 chr20 2296785 2296870 -69857012 - MIR SINE MIR -91 117 34 367 270 70 0 chr20 2297469 2297569 -69856313 + MIR SINE MIR 30 136 -72 1327 92 0 0 chr20 2298808 2298972 -69854910 + AluSg/x SINE Alu 137 300 -12 235 241 69 35 chr20 2299035 2299122 -69854760 - L3 LINE CR1 -189 1388 1299 2506 79 0 0 chr20 2299303 2299606 -69854276 + AluSx SINE Alu 1 303 -9 1887 108 58 0 chr20 2300275 2300535 -69853347 + AluSx SINE Alu 1 275 -37 918 182 45 0 chr20 2300544 2300698 -69853184 + AluJb SINE Alu 132 292 -20 267 298 91 8 chr20 2301087 2301208 -69852674 + MIR SINE MIR 5 135 -127 184 267 67 0 chr20 2301937 2301997 -69851885 - MIR SINE MIR -58 150 87 268 79 0 0 chr20 2302685 2302723 -69851159 + MIR SINE MIR 113 150 -112 342 325 145 5 chr20 2303062 2303262 -69850620 - MIR SINE MIR -15 247 20 1836 146 7 42 chr20 2303429 2303738 -69850144 + AluJo SINE Alu 1 298 -14 584 280 87 34 chr20 2304208 2304415 -69849467 + MIR SINE MIR 17 234 -28 218 274 73 81 chr20 2304683 2304807 -69849075 + MIR SINE MIR 21 141 -67 274 309 178 34 chr20 2306360 2306771 -69847111 - L1ME4a LINE L1 -123 5998 5529 1693 143 0 4 chr20 2307212 2307457 -69846425 + AluJo SINE Alu 45 288 -24 300 271 305 20 chr20 2307681 2307884 -69845998 - MIR SINE MIR 0 262 2 186 250 117 0 chr20 2307983 2308043 -69845839 + MIR SINE MIR 113 179 -83 432 225 101 14 chr20 2308205 2308343 -69845539 + MIR SINE MIR 33 182 -80 240 224 0 0 chr20 2308614 2308681 -69845201 + T-rich Low_complexity Low_complexity 1 67 0 202 322 33 41 chr20 2313406 2313527 -69840355 - MIR SINE MIR -116 146 27 228 281 233 14 chr20 2314038 2314184 -69839698 + MIR SINE MIR 67 244 -18 488 182 71 0 chr20 2314607 2314706 -69839176 - L1MB7 LINE L1 -43 6141 6036 411 167 0 0 chr20 2414708 2414774 -69739108 + AluSp/q SINE Alu 234 299 -14 204 274 43 60 chr20 2415243 2415360 -69738522 + MIR SINE MIR 148 262 0 189 213 0 0 chr20 2416186 2416233 -69737649 + (TATATG)n Simple_repeat Simple_repeat 4 50 0 506 330 132 26 chr20 2416263 2416611 -69737271 - L2 LINE L2 -81 3232 2848 211 336 44 9 chr20 2416660 2416773 -69737109 - MIR3 SINE MIR -54 154 38 2145 123 13 25 chr20 2417144 2417460 -69736422 - AluSx SINE Alu 0 312 1 448 222 21 56 chr20 2417499 2417643 -69736239 + L1MC/D LINE L1 5658 5796 -2012 898 260 22 5 chr20 2417643 2417866 -69736016 + MIR SINE MIR 36 262 0 1549 117 0 14 chr20 2418195 2418409 -69735473 - AluSg/x SINE Alu -17 293 83 827 149 0 0 chr20 2418409 2418523 -69735359 - AluSp SINE Alu -63 250 137 276 276 81 8 chr20 2419363 2419486 -69734396 - MIR3 SINE MIR -26 182 51 392 277 69 75 chr20 2420150 2420338 -69733544 - MIR SINE MIR -4 258 72 1002 221 41 156 chr20 2420648 2421277 -69732605 + MLT1G LTR MaLR 34 590 0 189 214 36 0 chr20 2421701 2421757 -69732125 + L2 LINE L2 2716 2773 -541 661 251 25 6 chr20 2421767 2421930 -69731952 + Charlie8 DNA MER1_type 11 176 -2241 902 165 74 0 chr20 2422357 2422533 -69731349 + MER5A DNA MER1_type 1 189 0 2464 93 3 0 chr20 2423207 2423517 -69730365 - AluSp SINE Alu -2 311 1 477 254 164 0 chr20 2423590 2423755 -69730127 - MIR SINE MIR -57 205 14 1910 146 0 14 chr20 2425096 2425408 -69728474 - AluSx SINE Alu 0 308 1 2485 226 30 41 chr20 2425413 2425593 -69728289 + MER82 DNA MER2_type 23 203 -450 1866 112 35 18 chr20 2425593 2425878 -69728004 + AluSx SINE Alu 5 294 -18 2485 226 30 41 chr20 2425878 2426335 -69727547 + MER82 DNA MER2_type 203 653 0 420 323 125 0 chr20 2426412 2426506 -69727376 + MIR SINE MIR 1 82 -180 1719 165 39 4 chr20 2426506 2426785 -69727097 - AluJb SINE Alu -23 289 1 420 323 125 0 chr20 2426785 2426922 -69726960 + MIR SINE MIR 82 261 -1 297 339 0 35 chr20 2427181 2427296 -69726586 - L2 LINE L2 -37 3276 3166 289 379 16 0 chr20 2427600 2427724 -69726158 - L2 LINE L2 -527 2787 2662 1385 258 79 22 chr20 2428266 2428898 -69724984 + L2 LINE L2 2642 3313 0 314 239 110 9 chr20 2428904 2429013 -69724869 - MIR SINE MIR -130 132 13 250 272 58 10 chr20 2429086 2429186 -69724696 + MER112 DNA MER1_type 56 160 -100 1867 235 17 34 chr20 2429186 2429662 -69724220 - MER90 LTR ERV1 0 614 147 517 241 82 10 chr20 2429653 2429860 -69724022 + MER20B DNA MER1_type 524 745 -38 * 1763 249 72 77 chr20 2429894 2430492 -69723390 - MLT1F LTR MaLR 0 542 1 572 262 30 69 chr20 2430630 2430792 -69723090 - MIR SINE MIR -13 249 95 765 164 0 15 chr20 2430792 2430926 -69722956 - FLAM_C SINE Alu -1 132 1 572 262 30 69 chr20 2430926 2430965 -69722917 - MIR SINE MIR -167 95 56 2072 224 111 9 chr20 2431188 2431728 -69722154 + MLT1G1 LTR MaLR 1 595 0 203 206 87 127 chr20 2432238 2432364 -69721518 - MIR3 SINE MIR -4 204 84 297 323 164 35 chr20 2432723 2432949 -69720933 - L3 LINE CR1 -29 1548 1294 535 319 32 0 chr20 2433454 2433611 -69720271 + L2 LINE L2 3111 3272 0 182 118 59 0 chr20 2433896 2433930 -69719952 + MIR SINE MIR 109 144 -64 185 315 39 55 chr20 2434249 2434376 -69719506 - L3 LINE CR1 -32 1545 1421 576 321 80 13 chr20 2434693 2434930 -69718952 + MIR SINE MIR 9 261 -1 283 293 154 8 chr20 2434988 2435111 -69718771 + MIR SINE MIR 58 198 -64 310 296 10 0 chr20 2435119 2435217 -69718665 + MER94 DNA DNA 1 99 -35 2507 76 0 0 chr20 2435288 2435590 -69718292 - AluY SINE Alu -9 302 1 229 239 104 15 chr20 2435763 2435830 -69718052 - MIR3 SINE MIR -49 159 87 464 274 68 7 chr20 2436490 2436636 -69717246 + MER117 DNA MER1_type 6 160 -37 180 270 243 0 chr20 2436834 2436908 -69716974 - MIR3 SINE MIR -54 154 63 1931 158 0 3 chr20 2437484 2437781 -69716101 - AluJb SINE Alu -16 296 1 400 274 9 0 chr20 2437850 2437963 -69715919 - MIR SINE MIR -70 192 79 364 333 18 0 chr20 2439181 2439295 -69714587 + MIR3 SINE MIR 86 201 -7 2161 112 10 10 chr20 2439974 2440268 -69713614 - AluSx SINE Alu -18 294 1 554 202 118 22 chr20 2440276 2440454 -69713428 + MIR3 SINE MIR 12 206 -2 483 350 101 28 chr20 2440655 2440766 -69713116 - L1ME4a LINE L1 -160 5961 5859 2008 103 11 29 chr20 2440766 2441047 -69712835 - AluY SINE Alu -13 298 23 483 350 101 28 chr20 2441047 2441252 -69712630 - L1ME4a LINE L1 -262 5859 5622 557 268 87 42 chr20 2441270 2441535 -69712347 + L1MC4a LINE L1 5621 5897 -1911 26 0 0 0 chr20 2441628 2441654 -69712228 + AT_rich Low_complexity Low_complexity 1 26 0 716 155 39 16 chr20 2441657 2441786 -69712096 + FLAM_A SINE Alu 1 132 -1 208 230 58 58 chr20 2441859 2441946 -69711936 + L2 LINE L2 2720 2806 -508 2183 104 0 0 chr20 2441956 2442254 -69711628 - AluSq SINE Alu -15 298 1 1036 207 78 0 chr20 2442548 2442765 -69711117 + MIR SINE MIR 29 262 0 335 256 61 0 chr20 2442765 2442847 -69711035 + L1ME4a LINE L1 6035 6121 0 1830 107 52 21 chr20 2443327 2443616 -69710266 - AluSx SINE Alu -14 298 1 30 27 0 0 chr20 2443618 2443655 -69710227 + AT_rich Low_complexity Low_complexity 1 37 0 1768 156 17 61 chr20 2443785 2444195 -69709687 + Charlie1b DNA MER1_type 132 523 0 206 221 11 5 chr20 2444589 2444656 -69709226 + MIR SINE MIR 100 166 -65 1239 179 0 41 chr20 2445552 2445798 -69708084 - AluJo SINE Alu -76 236 1 826 195 40 40 chr20 2445981 2446181 -69707701 + L1ME2 LINE L1 5946 6145 -19 316 248 35 106 chr20 2446233 2446459 -69707423 + L1MC4 LINE L1 7832 8041 -1 849 152 0 8 chr20 2446528 2446660 -69707222 - FLAM_A SINE Alu -2 131 1 318 355 6 6 chr20 2446671 2446837 -69707045 + LTR67 LTR ERVL 36 201 -356 503 312 5 24 chr20 2447701 2447919 -69705963 - MIR SINE MIR -8 254 7 4412 235 56 119 chr20 2448770 2449436 -69704446 + HAL1 LINE L1 120 827 -1680 1541 183 20 7 chr20 2449436 2449742 -69704140 - AluJo SINE Alu -2 310 1 4412 235 56 119 chr20 2449742 2451488 -69702394 + HAL1 LINE L1 827 2379 -128 276 174 0 0 chr20 2451503 2451549 -69702333 - MLT1E3 LTR MaLR -19 605 560 2306 192 50 52 chr20 2451562 2452145 -69701737 + L1MB5 LINE L1 5586 6167 -7 2056 100 28 3 chr20 2452328 2452617 -69701265 - AluSq SINE Alu -17 296 1 1222 230 108 49 chr20 2452829 2453334 -69700548 - MLT1E3 LTR MaLR -51 573 29 1574 211 133 42 chr20 2453334 2453375 -69700507 - MLT2B1 LTR ERVL 0 520 484 234 0 0 0 chr20 2453375 2453401 -69700481 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 1574 211 133 42 chr20 2453401 2453834 -69700048 - MLT2B1 LTR ERVL -36 484 3 1222 230 108 49 chr20 2453834 2453862 -69700020 - MLT1E3 LTR MaLR -595 29 4 734 330 48 22 chr20 2453991 2454264 -69699618 + MER115 DNA AcHobo 90 369 -324 2477 176 28 35 chr20 2454264 2454579 -69699303 - L1MD2 LINE L1 0 6359 6048 2312 84 0 0 chr20 2454579 2454878 -69699004 - AluY SINE Alu -12 299 1 2477 176 28 35 chr20 2454878 2455107 -69698775 - L1MD2 LINE L1 -311 6048 5819 1719 214 43 0 chr20 2455107 2455481 -69698401 + L1MD1 LINE L1 5494 5883 -359 207 0 0 0 chr20 2455499 2455522 -69698360 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1161 227 52 0 chr20 2455559 2455810 -69698072 - L1MDb LINE L1 -6138 271 8 652 279 61 39 chr20 2455842 2456122 -69697760 + MER115 DNA AcHobo 407 692 -1 1629 167 13 23 chr20 2456237 2456537 -69697345 + AluJo SINE Alu 1 297 -15 10189 157 71 8 chr20 2456732 2458721 -69695161 + L1M4c LINE L1 2 2211 -4173 1466 177 0 4 chr20 2458723 2458994 -69694888 + L1MB3 LINE L1 5912 6181 -2 524 144 29 93 chr20 2459026 2459102 -69694780 + L1ME3 LINE L1 6030 6095 -67 6473 98 7 2 chr20 2459102 2460719 -69693163 + L1PA15 LINE L1 4528 6165 0 524 144 29 93 chr20 2460719 2460781 -69693101 + L1ME3 LINE L1 6095 6159 -3 512 310 179 14 chr20 2461525 2461877 -69692005 + L2 LINE L2 2140 2549 -765 816 286 97 19 chr20 2462052 2462423 -69691459 - LTR16C LTR ERVL 0 491 92 838 275 36 18 chr20 2462833 2463219 -69690663 - L1M4c LINE L1 -3989 2657 2265 1509 134 14 28 chr20 2463251 2463534 -69690348 - L1MB3 LINE L1 -1 6182 5904 2927 180 82 15 chr20 2463538 2464326 -69689556 - L1MB3 LINE L1 -590 5593 4724 2723 252 98 29 chr20 2464316 2466208 -69687674 - L1M4c LINE L1 -4495 2151 48 * 458 225 1 25 chr20 2466261 2466395 -69687487 - L1MC5 LINE L1 0 8042 7808 2100 106 3 26 chr20 2466514 2466825 -69687057 - AluSx SINE Alu -4 308 5 192 195 0 24 chr20 2467146 2467187 -69686695 - MER5A DNA MER1_type -114 75 36 944 0 0 9 chr20 2467214 2467327 -69686555 - AluY SINE Alu -2 309 198 1043 218 36 18 chr20 2467764 2467984 -69685898 - MIR SINE MIR 0 262 39 244 239 14 42 chr20 2468212 2468283 -69685599 - MER5A DNA MER1_type -84 105 37 * 298 284 0 14 chr20 2468228 2468302 -69685580 + MER5A DNA MER1_type 111 183 -6 278 275 34 98 chr20 2468415 2468651 -69685231 - MLT1J LTR MaLR -24 487 267 362 336 39 0 chr20 2468658 2468786 -69685096 + LTR67 LTR ERVL 110 242 -315 227 289 11 116 chr20 2468849 2469039 -69684843 + LTR67 LTR ERVL 362 531 -26 408 278 156 23 chr20 2469155 2469328 -69684554 + L2 LINE L2 3118 3313 0 1301 270 137 35 chr20 2469749 2470092 -69683790 - MLT1G1 LTR MaLR 0 595 176 531 0 0 0 chr20 2470092 2470151 -69683731 + (GA)n Simple_repeat Simple_repeat 1 59 0 1301 270 137 35 chr20 2470151 2470347 -69683535 - MLT1G1 LTR MaLR -419 176 1 1090 254 194 12 chr20 2470871 2471506 -69682376 + L2 LINE L2 2432 3189 -124 1207 95 0 0 chr20 2471809 2471977 -69681905 + AluY SINE Alu 131 298 -13 234 247 86 12 chr20 2472738 2472819 -69681063 + MIR SINE MIR 111 197 -65 846 229 106 4 chr20 2473188 2473424 -69680458 + MIR SINE MIR 1 260 -2 274 330 26 110 chr20 2473498 2473771 -69680111 - L2 LINE L2 -25 3247 2998 291 247 215 0 chr20 2473821 2473914 -69679968 - MLT1H LTR MaLR -16 533 421 1702 225 85 44 chr20 2473921 2474044 -69679838 - L1MEc LINE L1 -2649 3566 3450 1693 163 48 0 chr20 2474044 2474338 -69679544 - AluJb SINE Alu -4 308 1 1702 225 85 44 chr20 2474338 2474610 -69679272 - L1MEc LINE L1 -2765 3450 3191 2117 111 3 0 chr20 2474610 2474917 -69678965 - AluSp SINE Alu -5 308 1 1702 225 85 44 chr20 2474917 2475250 -69678632 - L1MEc LINE L1 -3024 3191 2807 * 1737 231 66 11 chr20 2475243 2475667 -69678215 - L1MEc LINE L1 -3873 2523 2124 2021 143 0 0 chr20 2475667 2475974 -69677908 - AluSx SINE Alu -5 307 1 1881 166 3 6 chr20 2475977 2476290 -69677592 - AluSx SINE Alu 0 312 1 1737 231 66 11 chr20 2476290 2476485 -69677397 - L1MEc LINE L1 -4273 2123 1866 2471 282 35 27 chr20 2476485 2477254 -69676628 - HERV16 LTR ERVL -3667 1329 555 648 165 0 19 chr20 2477339 2477442 -69676440 - FRAM SINE Alu -16 160 60 414 212 278 10 chr20 2478068 2478266 -69675616 - L3 LINE CR1 -115 1462 1212 817 165 0 0 chr20 2479934 2480061 -69673821 - FLAM_C SINE Alu -16 127 1 192 351 36 0 chr20 2480214 2480325 -69673557 - L3 LINE CR1 -379 1198 1084 259 223 146 29 chr20 2480472 2480575 -69673307 + MIR3 SINE MIR 67 181 -27 212 269 51 13 chr20 2480735 2480813 -69673069 - MIR SINE MIR -119 143 63 2175 85 7 3 chr20 2481684 2481979 -69671903 - AluSx SINE Alu -16 296 1 432 288 85 42 chr20 2482290 2482526 -69671356 - L2 LINE L2 -44 3269 3024 276 338 58 19 chr20 2482523 2482677 -69671205 - MIR SINE MIR -90 172 13 * 245 323 219 0 chr20 2483450 2483605 -69670277 + MIR3 SINE MIR 20 208 0 917 106 8 0 chr20 2484621 2484753 -69669129 - FLAM_C SINE Alu -10 133 1 227 309 111 25 chr20 2485492 2485654 -69668228 - MIR3 SINE MIR -29 179 4 1693 130 41 54 chr20 2485720 2486036 -69667846 + AluJo SINE Alu 1 312 0 311 270 53 112 chr20 2486616 2486768 -69667114 + MIR SINE MIR 1 143 -65 2169 110 0 22 chr20 2488373 2488692 -69665190 - AluSx SINE Alu 0 312 1 553 315 104 14 chr20 2489560 2489782 -69664100 - MIR SINE MIR -13 249 8 252 318 11 11 chr20 2489842 2489930 -69663952 + L2 LINE L2 3184 3271 -1 428 315 103 5 chr20 2490312 2490496 -69663386 + MARNA DNA Mariner 301 502 -84 189 0 0 0 chr20 2491771 2491792 -69662090 + (TAGA)n Simple_repeat Simple_repeat 1 21 0 569 181 66 163 chr20 2491794 2491916 -69661966 + MER112 DNA MER1_type 1 133 -127 184 42 0 0 chr20 2491916 2491940 -69661942 + (TTTG)n Simple_repeat Simple_repeat 1 180 0 2154 59 0 24 chr20 2491940 2492227 -69661655 - AluY SINE Alu -1 303 1 569 181 66 163 chr20 2492227 2492391 -69661491 + MER112 DNA MER1_type 131 260 0 1789 143 7 7 chr20 2492556 2492849 -69661033 - AluSx SINE Alu -19 293 1 207 180 45 112 chr20 2493537 2493626 -69660256 - MIR SINE MIR -57 151 69 505 317 112 18 chr20 2493661 2493885 -69659997 - MIR SINE MIR -9 253 9 1990 261 133 25 chr20 2494456 2495367 -69658515 + L1ME LINE L1 6 1014 -5056 1764 240 71 62 chr20 2495485 2496346 -69657536 + L1PB1 LINE L1 5282 6150 -1 740 206 24 12 chr20 2496650 2496815 -69657067 - MIR SINE MIR -57 205 39 386 169 8 89 chr20 2496883 2497007 -69656875 + L1ME4a LINE L1 5786 5899 -222 25 0 0 0 chr20 2497212 2497237 -69656645 + AT_rich Low_complexity Low_complexity 1 25 0 235 265 29 44 chr20 2497948 2498016 -69655866 + L2 LINE L2 2988 3054 -218 211 383 25 0 chr20 2498856 2498937 -69654945 - MIR3 SINE MIR -42 166 84 550 190 141 68 chr20 2498963 2499126 -69654756 + MIR SINE MIR 82 256 -6 549 257 56 50 chr20 2499436 2499615 -69654267 - MIR3 SINE MIR -7 201 22 182 250 0 0 chr20 2499876 2499908 -69653974 + MIR SINE MIR 38 69 -139 2102 111 3 0 chr20 2501097 2501386 -69652496 + AluSq SINE Alu 1 290 -23 293 0 0 26 chr20 2501455 2501493 -69652389 + (TA)n Simple_repeat Simple_repeat 2 38 0 206 0 42 83 chr20 2502790 2502838 -69651044 + (TTTA)n Simple_repeat Simple_repeat 3 48 0 1674 130 67 0 chr20 2502848 2503118 -69650764 - AluSx SINE Alu -24 288 1 195 232 0 0 chr20 2503185 2503241 -69650641 + (TTCA)n Simple_repeat Simple_repeat 1 56 0 549 246 67 58 chr20 2503322 2503546 -69650336 + L1MC5 LINE L1 7706 7931 -30 267 209 42 49 chr20 2503550 2503656 -69650226 + MIR SINE MIR 42 146 -73 207 294 44 0 chr20 2503732 2503800 -69650082 + MIR3 SINE MIR 112 182 -26 1357 192 66 0 chr20 2504685 2504844 -69649038 - AluJo SINE Alu -20 292 106 402 21 0 0 chr20 2504844 2504891 -69648991 + (TG)n Simple_repeat Simple_repeat 2 48 0 1357 192 66 0 chr20 2504891 2505002 -69648880 - AluJo SINE Alu -206 106 4 1553 168 0 59 chr20 2505074 2505229 -69648653 - AluJo SINE Alu -24 288 158 1561 172 35 14 chr20 2505229 2505519 -69648363 - AluJb SINE Alu -13 299 4 1553 168 0 59 chr20 2505519 2505667 -69648215 - AluJo SINE Alu -154 158 3 234 171 0 0 chr20 2505733 2505803 -69648079 + (TG)n Simple_repeat Simple_repeat 2 71 0 277 265 128 0 chr20 2505827 2505929 -69647953 + MIR3 SINE MIR 43 157 -51 427 323 71 9 chr20 2506130 2506356 -69647526 + MIR SINE MIR 14 253 -9 32 0 0 0 chr20 2506781 2506813 -69647069 + AT_rich Low_complexity Low_complexity 1 32 0 272 259 106 12 chr20 2506899 2506984 -69646898 + MIR3 SINE MIR 94 186 -22 2243 102 10 0 chr20 2506994 2507298 -69646584 - AluSx SINE Alu -5 307 1 601 252 48 48 chr20 2507418 2507648 -69646234 + L2 LINE L2 2896 3125 -188 419 333 71 7 chr20 2508028 2508169 -69645713 + L2 LINE L2 3122 3271 -1 259 292 37 14 chr20 2508723 2508856 -69645026 - MIR SINE MIR -62 200 64 368 314 39 13 chr20 2509357 2509513 -69644369 - MIR3 SINE MIR -27 181 22 242 383 33 0 chr20 2509999 2510119 -69643763 + L2 LINE L2 2904 3027 -245 2057 120 0 3 chr20 2510238 2510539 -69643343 + AluSq SINE Alu 2 301 -12 1789 158 0 3 chr20 2511173 2511476 -69642406 - AluJb SINE Alu -10 302 1 213 245 0 0 chr20 2511528 2511577 -69642305 + (TAAA)n Simple_repeat Simple_repeat 4 52 0 186 143 0 0 chr20 2512234 2512269 -69641613 + (TTCA)n Simple_repeat Simple_repeat 3 37 0 2119 134 0 6 chr20 2512639 2512953 -69640929 + AluSx SINE Alu 1 312 0 416 346 86 7 chr20 2513494 2513709 -69640173 - MIR SINE MIR -14 248 18 395 223 21 11 chr20 2513891 2513985 -69639897 - MIR SINE MIR -121 141 47 2997 201 95 43 chr20 2513985 2514751 -69639131 + MER21B LTR ERV1 1 806 -57 219 209 99 55 chr20 2515437 2515528 -69638354 - MIR3 SINE MIR -25 183 89 239 277 53 11 chr20 2515735 2515829 -69638053 + MLT1J LTR MaLR 104 201 -310 2378 148 30 70 chr20 2515843 2516086 -69637796 - L1MB5 LINE L1 -6 6168 5917 2199 96 3 6 chr20 2516086 2516398 -69637484 - AluSx SINE Alu -1 311 1 2378 148 30 70 chr20 2516398 2516693 -69637189 - L1MB5 LINE L1 -257 5917 5652 663 231 60 82 chr20 2516739 2517021 -69636861 + MLT1J LTR MaLR 224 499 -12 2159 102 0 0 chr20 2517415 2517708 -69636174 + AluSx SINE Alu 1 293 -19 660 251 96 17 chr20 2517728 2517967 -69635915 + MER112 DNA MER1_type 2 259 -1 193 244 67 84 chr20 2517967 2518086 -69635796 - MIR3 SINE MIR -48 160 44 267 312 0 64 chr20 2518392 2518501 -69635381 + MIR SINE MIR 87 188 -74 564 301 46 20 chr20 2518624 2518820 -69635062 - MIR SINE MIR -16 246 46 329 295 80 18 chr20 2519014 2519126 -69634756 + MER5B DNA MER1_type 1 119 -59 602 136 0 30 chr20 2519126 2519258 -69634624 + (TTTC)n Simple_repeat Simple_repeat 1 128 0 1815 156 6 34 chr20 2519280 2519600 -69634282 - AluSx SINE Alu -1 311 1 280 183 0 50 chr20 2519600 2519660 -69634222 + MER5B DNA MER1_type 121 177 -1 227 180 0 40 chr20 2519766 2519816 -69634066 - MIR SINE MIR -62 146 99 576 276 43 0 chr20 2520211 2520374 -69633508 - MIR SINE MIR -92 170 1 182 295 95 32 chr20 2521541 2521636 -69632246 + L2 LINE L2 3153 3253 -19 269 318 159 8 chr20 2521974 2522100 -69631782 - MIR3 SINE MIR -17 191 47 260 278 146 28 chr20 2522164 2522308 -69631574 + MIR3 SINE MIR 23 183 -25 277 367 93 0 chr20 2524663 2524802 -69629080 + L2 LINE L2 3121 3272 0 644 216 207 19 chr20 2524851 2525059 -69628823 - MIR SINE MIR 0 262 16 263 307 193 9 chr20 2525564 2525678 -69628204 + MIR SINE MIR 96 230 -32 22 0 0 0 chr20 2525697 2525719 -69628163 + AT_rich Low_complexity Low_complexity 1 22 0 2056 106 20 3 chr20 2525723 2526016 -69627866 + AluSx SINE Alu 1 298 -14 456 337 87 0 chr20 2526143 2526315 -69627567 + MIR3 SINE MIR 2 143 -65 2165 104 0 3 chr20 2526844 2527141 -69626741 - AluSq SINE Alu -15 298 3 261 242 17 92 chr20 2527193 2527313 -69626569 + L2 LINE L2 3151 3261 -52 788 172 16 0 chr20 2527340 2527468 -69626414 + FLAM_C SINE Alu 2 131 -12 424 267 44 84 chr20 2527515 2527811 -69626071 - L3 LINE CR1 -193 1384 1101 2206 95 0 0 chr20 2527924 2528220 -69625662 - AluSx SINE Alu -16 296 1 475 232 30 77 chr20 2528462 2528630 -69625252 + MIR SINE MIR 47 206 -56 512 301 107 5 chr20 2528805 2529011 -69624871 - MIR SINE MIR -35 227 1 2173 112 0 0 chr20 2529869 2530174 -69623708 + AluSx SINE Alu 1 305 -7 370 290 28 0 chr20 2530208 2530315 -69623567 - MIR3 SINE MIR -14 194 85 322 286 0 51 chr20 2530310 2530408 -69623474 - MIR3 SINE MIR -3 205 113 * 1751 164 0 4 chr20 2530513 2530794 -69623088 - AluJb SINE Alu -28 284 5 1041 296 25 68 chr20 2532610 2533093 -69620789 - L2 LINE L2 -1 3312 2851 1681 120 0 0 chr20 2533195 2533436 -69620446 + AluSc SINE Alu 63 303 -6 1479 200 62 0 chr20 2533486 2533806 -69620076 - MER58B DNA MER1_type 0 341 2 1509 172 41 7 chr20 2533816 2534145 -69619737 - MER33 DNA MER1_type 0 324 1 243 295 0 0 chr20 2534251 2534329 -69619553 + (ATTTG)n Simple_repeat Simple_repeat 5 82 0 1253 108 0 0 chr20 2534581 2534757 -69619125 + AluSq SINE Alu 135 310 -3 222 62 0 0 chr20 2534771 2534803 -69619079 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 803 160 15 0 chr20 2535195 2535413 -69618469 - FLAM_C SINE Alu 0 220 1 725 313 84 10 chr20 2535546 2535856 -69618026 - MLT1I LTR MaLR -14 395 63 463 280 114 89 chr20 2535988 2536235 -69617647 - L1MC5 LINE L1 -105 7856 7600 1761 146 3 7 chr20 2536235 2536522 -69617360 - AluJb SINE Alu -26 286 1 463 280 114 89 chr20 2536522 2536545 -69617337 - L1MC5 LINE L1 -361 7600 7579 2820 250 120 37 chr20 2536784 2538203 -69615679 + L1MC4a LINE L1 4762 6062 -84 1012 201 106 0 chr20 2538203 2538402 -69615480 + MER58A DNA MER1_type 4 223 -1 2820 250 120 37 chr20 2538402 2538503 -69615379 + L1MC4a LINE L1 6062 5345 -801 2032 108 35 0 chr20 2538503 2538791 -69615091 - AluSp SINE Alu -15 298 1 2820 250 120 37 chr20 2538791 2538857 -69615025 + L1MC4a LINE L1 5344 5403 -743 234 330 11 11 chr20 2540023 2540111 -69613771 + L2 LINE L2 3173 3260 -12 403 217 198 76 chr20 2542602 2542921 -69610961 + LTR16A LTR ERVL 8 364 -93 186 254 0 0 chr20 2543822 2543889 -69609993 + CT-rich Low_complexity Low_complexity 2 68 0 1855 210 28 13 chr20 2544582 2544972 -69608910 - MSTD LTR MaLR 0 396 1 792 134 0 52 chr20 2545948 2546082 -69607800 + FLAM_C SINE Alu 2 128 -5 2123 108 0 0 chr20 2546447 2546716 -69607166 + AluSx SINE Alu 27 295 -17 783 185 7 22 chr20 2547503 2547638 -69606244 - FLAM_C SINE Alu 0 133 1 837 170 79 0 chr20 2548269 2548434 -69605448 + LTR41 LTR ERVL 1 178 -595 680 110 0 0 chr20 2548469 2548569 -69605313 - AluSp/q SINE Alu 0 313 214 225 269 103 26 chr20 2549256 2549334 -69604548 + LTR41 LTR ERVL 510 593 -180 1975 99 18 4 chr20 2549431 2549703 -69604179 - AluSq SINE Alu -36 277 2 898 206 104 28 chr20 2549946 2550284 -69603598 + MER58B DNA MER1_type 1 328 -13 3812 182 68 11 chr20 2550436 2550937 -69602945 + L1MB7 LINE L1 4625 5096 -1088 1814 130 53 33 chr20 2550937 2551236 -69602646 + AluJb SINE Alu 1 305 -7 3812 182 68 11 chr20 2551236 2551801 -69602081 + L1MB7 LINE L1 5096 5789 -395 1848 125 83 3 chr20 2551801 2552113 -69601769 - MER44D DNA MER2_type -2 607 1 3812 182 68 11 chr20 2552113 2552275 -69601607 + L1MB7 LINE L1 5789 5940 -244 538 195 120 25 chr20 2552317 2552517 -69601365 + L2 LINE L2 3008 3226 -87 190 286 143 71 chr20 2552625 2552765 -69601117 + MIR SINE MIR 35 184 -78 1178 264 131 64 chr20 2552766 2553457 -69600425 - L2 LINE L2 -373 2941 2197 2220 93 0 66 chr20 2553457 2553790 -69600092 + AluSx SINE Alu 1 311 -1 1178 264 131 64 chr20 2553790 2553832 -69600050 - L2 LINE L2 -1117 2197 2159 993 244 111 31 chr20 2553813 2554264 -69599618 - L2 LINE L2 -10 3303 2817 * 2294 100 0 3 chr20 2555574 2555875 -69598007 - AluSq SINE Alu -13 300 1 268 265 128 0 chr20 2555875 2555992 -69597890 - L2 LINE L2 -565 2749 2618 673 226 164 0 chr20 2556002 2556210 -69597672 + MIR SINE MIR 15 256 -6 2151 130 0 0 chr20 2556341 2556641 -69597241 - AluSx SINE Alu -12 300 1 842 111 0 15 chr20 2559735 2559870 -69594012 + FLAM_C SINE Alu 1 133 0 347 245 102 10 chr20 2560198 2560296 -69593586 - MIR SINE MIR -115 147 41 1298 91 0 17 chr20 2560389 2560564 -69593318 - AluSc SINE Alu -6 303 132 240 330 38 0 chr20 2560963 2561069 -69592813 - MIR SINE MIR -57 151 42 3329 208 111 50 chr20 2564159 2565859 -69588023 + L1MB5 LINE L1 3841 5647 -533 759 236 89 13 chr20 2565864 2566089 -69587793 + MER21B LTR ERV1 1 242 -621 545 211 0 0 chr20 2566127 2566222 -69587660 + LTR8A LTR ERV1 169 263 -464 351 176 118 0 chr20 2566227 2566295 -69587587 - LTR8 LTR ERV1 -613 78 3 1738 197 92 28 chr20 2566300 2566409 -69587473 + L1MB5 LINE L1 5677 5778 -396 1841 148 99 69 chr20 2566409 2566841 -69587041 - MER65A LTR ERV1 0 445 1 1738 197 92 28 chr20 2566841 2567199 -69586683 + L1MB5 LINE L1 5778 6174 0 2003 125 66 0 chr20 2567479 2567768 -69586114 - AluSx SINE Alu -4 308 1 2096 93 18 7 chr20 2568266 2568546 -69585336 + AluSx SINE Alu 11 293 -19 1124 117 0 19 chr20 2569142 2569304 -69584578 - FRAM SINE Alu -21 155 1 361 156 55 18 chr20 2569345 2569454 -69584428 + CT-rich Low_complexity Low_complexity 2 114 0 249 116 5 68 chr20 2569461 2569520 -69584362 - Alu SINE Alu 0 302 253 2008 46 4 4 chr20 2569968 2570208 -69583674 + AluSp SINE Alu 1 240 -73 189 0 0 0 chr20 2570221 2570242 -69583640 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 2064 108 27 17 chr20 2570623 2570919 -69582963 + AluSx SINE Alu 1 299 -13 297 303 113 30 chr20 2570930 2571161 -69582721 - L1MC/D LINE L1 -2215 5593 5344 193 105 0 53 chr20 2571176 2571214 -69582668 + L2 LINE L2 3207 3242 -71 279 0 0 0 chr20 2571236 2571267 -69582615 + (TGAA)n Simple_repeat Simple_repeat 1 31 0 227 209 0 0 chr20 2571271 2571314 -69582568 + MIR SINE MIR 105 147 -115 539 120 102 0 chr20 2571387 2571495 -69582387 - LTR52 LTR ERVL -67 354 236 2119 221 77 22 chr20 2571601 2572148 -69581734 + L1ME3A LINE L1 5594 6170 0 207 171 0 0 chr20 2572150 2572167 -69581715 + A-rich Low_complexity Low_complexity 1 17 -24 626 132 47 0 chr20 2572167 2572273 -69581609 + HY1 scRNA scRNA 1 111 -1 207 171 0 0 chr20 2572273 2572296 -69581586 + A-rich Low_complexity Low_complexity 16 41 0 891 272 59 49 chr20 2572417 2572843 -69581039 - L2 LINE L2 0 3313 2884 1657 230 120 56 chr20 2572846 2573466 -69580416 + LTR41 LTR ERVL 3 696 -99 2283 189 17 13 chr20 2573466 2573925 -69579957 + MER65C LTR ERV1 1 461 0 1657 230 120 56 chr20 2573925 2574032 -69579850 + LTR41 LTR ERVL 696 795 0 1029 285 88 25 chr20 2574038 2574550 -69579332 - L2 LINE L2 -436 2878 2335 1054 219 36 33 chr20 2574745 2574936 -69578946 + L1M4b LINE L1 1212 1401 -5458 212 0 36 0 chr20 2574936 2574964 -69578918 + (TC)n Simple_repeat Simple_repeat 1 29 0 * 270 81 0 0 chr20 2574963 2575000 -69578882 + (CA)n Simple_repeat Simple_repeat 1 37 0 1054 219 36 33 chr20 2574964 2575114 -69578768 + L1M4b LINE L1 1401 1518 -5341 386 191 43 11 chr20 2575145 2575239 -69578643 + L1M4b LINE L1 3475 3571 -3386 873 150 0 0 chr20 2575281 2575408 -69578474 - FLAM_C SINE Alu -6 127 1 4781 154 25 48 chr20 2575415 2576360 -69577522 - L1MD1 LINE L1 0 6740 5817 1570 115 196 8 chr20 2576360 2576620 -69577262 - AluSg1 SINE Alu 0 309 1 4781 154 25 48 chr20 2576620 2576649 -69577233 - L1MD1 LINE L1 -923 5817 5789 399 129 212 0 chr20 2576649 2576734 -69577148 - MER21-int LTR ERV1 -231 3960 3858 1823 214 83 41 chr20 2576734 2577287 -69576595 - L1MD1 LINE L1 -2400 4244 3659 2005 152 0 13 chr20 2577287 2577603 -69576279 - AluSx SINE Alu 0 312 1 1823 214 83 41 chr20 2577603 2577690 -69576192 - L1MD1 LINE L1 -2985 3659 3577 2303 79 7 0 chr20 2577694 2577984 -69575898 - AluSp SINE Alu -21 292 1 1066 176 80 73 chr20 2578007 2578354 -69575528 - MER66A LTR ERV1 -139 340 97 5173 201 58 61 chr20 2578406 2579643 -69574239 - L1MD1 LINE L1 -5108 1434 201 1831 172 7 0 chr20 2579643 2579951 -69573931 + AluJb SINE Alu 1 310 -2 5173 201 58 61 chr20 2579951 2580148 -69573734 - L1MD1 LINE L1 -6341 201 5 874 107 0 137 chr20 2580192 2580419 -69573463 + AluSg/x SINE Alu 136 339 0 2263 142 78 0 chr20 2580419 2580793 -69573089 + MER101 LTR ERV1 72 474 0 586 273 42 24 chr20 2580817 2581150 -69572732 - L1M4 LINE L1 -846 5300 4962 247 179 0 0 chr20 2581150 2581189 -69572693 - LTR47B LTR ERVL 0 443 405 1301 203 0 8 chr20 2581190 2581426 -69572456 - LTR47B LTR ERVL 0 443 210 262 189 0 34 chr20 2581436 2581495 -69572387 - LTR47B LTR ERVL -185 258 200 262 189 0 34 chr20 2581497 2581556 -69572326 - LTR47B LTR ERVL -185 258 200 247 189 0 34 chr20 2581558 2581617 -69572265 - LTR47B LTR ERVL -185 258 200 262 189 0 34 chr20 2581619 2581678 -69572204 - LTR47B LTR ERVL -185 258 200 232 171 0 0 chr20 2581680 2581715 -69572167 - LTR47A LTR ERVL -194 258 224 247 189 0 34 chr20 2581741 2581800 -69572082 - LTR47B LTR ERVL -185 258 200 262 189 0 34 chr20 2581802 2581861 -69572021 - LTR47B LTR ERVL -185 258 200 247 189 0 34 chr20 2581863 2581922 -69571960 - LTR47B LTR ERVL -185 258 200 262 189 0 34 chr20 2581924 2581983 -69571899 - LTR47B LTR ERVL -185 258 200 258 271 0 0 chr20 2581985 2582044 -69571838 - LTR47A LTR ERVL -194 258 200 262 189 0 34 chr20 2582046 2582105 -69571777 - LTR47B LTR ERVL -185 258 200 262 189 0 34 chr20 2582107 2582166 -69571716 - LTR47B LTR ERVL -185 258 200 262 189 0 34 chr20 2582168 2582227 -69571655 - LTR47B LTR ERVL -185 258 200 1060 208 4 79 chr20 2582229 2582508 -69571374 - LTR47A LTR ERVL -194 258 1 2163 110 17 0 chr20 2582527 2582826 -69571056 - AluSx SINE Alu -8 304 1 1888 261 119 11 chr20 2582831 2583628 -69570254 - L1M4 LINE L1 -1194 4952 4070 2155 132 0 6 chr20 2583675 2583986 -69569896 + AluSx SINE Alu 1 309 -3 568 252 19 7 chr20 2584644 2584799 -69569083 + MIR SINE MIR 14 170 -92 1884 212 32 63 chr20 2584959 2585496 -69568386 + MLT2B1 LTR ERVL 1 520 0 1610 250 108 43 chr20 2586019 2586507 -69567375 + MLT1G1 LTR MaLR 3 533 -62 2367 98 3 0 chr20 2586507 2586813 -69567069 - AluSp SINE Alu -6 307 1 1610 250 108 43 chr20 2586813 2586881 -69567001 + MLT1G1 LTR MaLR 533 595 0 286 303 8 91 chr20 2587207 2587260 -69566622 + L2 LINE L2 2952 3008 -305 687 261 58 43 chr20 2587260 2587517 -69566365 + MIR SINE MIR 2 262 0 286 303 8 91 chr20 2587517 2587595 -69566287 + L2 LINE L2 3008 3072 -241 1956 141 0 11 chr20 2587604 2587739 -69566143 + AluSx SINE Alu 1 136 -178 225 0 0 0 chr20 2587739 2587764 -69566118 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 1956 141 0 11 chr20 2587764 2587945 -69565937 + AluSx SINE Alu 136 314 0 1278 279 58 7 chr20 2588213 2588640 -69565242 + LTR16A LTR ERVL 2 450 0 1253 206 5 0 chr20 2589615 2589834 -69564048 + MER58A DNA MER1_type 5 224 0 5403 129 19 45 chr20 2590411 2590670 -69563212 - HSMAR2 DNA Mariner 0 1302 1038 2351 103 0 0 chr20 2590670 2590971 -69562911 + AluSx SINE Alu 1 301 -11 5403 129 19 45 chr20 2590971 2591285 -69562597 - HSMAR2 DNA Mariner -264 1038 759 2240 103 17 0 chr20 2591285 2591577 -69562305 - AluSx SINE Alu -15 297 1 5403 129 19 45 chr20 2591577 2591908 -69561974 - HSMAR2 DNA Mariner -543 759 421 463 258 30 0 chr20 2592437 2592569 -69561313 - MIR3 SINE MIR -39 169 34 2205 121 3 6 chr20 2592937 2593250 -69560632 + AluSx SINE Alu 1 312 0 180 318 257 6 chr20 2593263 2593442 -69560440 + L2 LINE L2 2831 3054 -218 198 331 63 14 chr20 2593472 2593614 -69560268 + L2 LINE L2 2951 3099 -173 385 229 7 13 chr20 2593779 2593932 -69559950 + (TGAA)n Simple_repeat Simple_repeat 1 152 0 580 159 12 29 chr20 2593948 2594118 -69559764 + (TGAA)n Simple_repeat Simple_repeat 2 168 0 243 286 57 9 chr20 2594941 2595046 -69558836 - MIR SINE MIR -79 183 74 202 103 0 0 chr20 2595204 2595233 -69558649 - L2 LINE L2 -18 3295 3267 2355 93 0 0 chr20 2595503 2595794 -69558088 - AluSc SINE Alu -16 293 3 197 130 0 22 chr20 2596134 2596160 -69557722 + (TAA)n Simple_repeat Simple_repeat 2 28 -18 2143 94 11 14 chr20 2596160 2596447 -69557435 + AluSx SINE Alu 1 286 -26 197 130 0 22 chr20 2596447 2596466 -69557416 + (TAA)n Simple_repeat Simple_repeat 28 46 0 318 271 74 0 chr20 2596467 2596589 -69557293 - MIR SINE MIR -1 261 131 22 70 0 0 chr20 2596591 2596634 -69557248 + AT_rich Low_complexity Low_complexity 1 43 0 193 365 0 0 chr20 2596643 2596728 -69557154 - MIR SINE MIR -2 260 176 527 125 0 0 chr20 2596742 2596822 -69557060 + MER5A DNA MER1_type 5 84 -105 1345 245 3 3 chr20 2597042 2597377 -69556505 + L1MC2 LINE L1 2638 2972 -3174 1046 161 0 0 chr20 2597377 2597538 -69556344 + AluJb SINE Alu 149 309 -3 9209 186 30 46 chr20 2597549 2599271 -69554611 + L1MC2 LINE L1 2954 4703 -1641 1370 161 48 20 chr20 2599271 2599563 -69554319 + L1MA4 LINE L1 5995 6294 -6 9209 186 30 46 chr20 2599563 2599768 -69554114 + L1MC2 LINE L1 4703 4910 -1434 14636 115 37 54 chr20 2599768 2599919 -69553963 + Tigger1 DNA MER2_type 1 153 -2265 1725 159 3 51 chr20 2599919 2600233 -69553649 - AluJo SINE Alu -13 299 1 14636 115 37 54 chr20 2600233 2602318 -69551564 + Tigger1 DNA MER2_type 153 2193 -225 1852 138 6 66 chr20 2602318 2602636 -69551246 - AluJb SINE Alu -13 299 1 14636 115 37 54 chr20 2602636 2602858 -69551024 + Tigger1 DNA MER2_type 2193 2417 -1 9209 186 30 46 chr20 2602858 2603146 -69550736 + L1MC2 LINE L1 4910 5201 -1143 2308 100 0 0 chr20 2603146 2603435 -69550447 - AluSx SINE Alu -23 289 1 9209 186 30 46 chr20 2603435 2604000 -69549882 + L1MC2 LINE L1 5201 5661 -683 2381 98 0 7 chr20 2604000 2604305 -69549577 + AluSc SINE Alu 1 303 -6 9209 186 30 46 chr20 2604305 2604976 -69548906 + L1MC2 LINE L1 5661 6342 -2 2406 69 0 7 chr20 2605018 2605322 -69548560 - AluY SINE Alu -9 302 1 370 253 230 37 chr20 2605445 2605793 -69548089 + L1ME4a LINE L1 5706 6120 -1 253 222 8 8 chr20 2606025 2606151 -69547731 + GA-rich Low_complexity Low_complexity 1 126 0 1784 81 0 9 chr20 2606269 2606490 -69547392 - AluSc SINE Alu -90 219 1 494 320 49 9 chr20 2606754 2606979 -69546903 + MIR SINE MIR 15 248 -14 1951 124 40 13 chr20 2606986 2607284 -69546598 + AluSg SINE Alu 1 306 -4 364 225 79 0 chr20 2607316 2607405 -69546477 - MER46C DNA MER2_type -23 315 220 223 192 0 0 chr20 2607520 2607566 -69546316 + MIR SINE MIR 105 149 -66 359 250 148 39 chr20 2608124 2608252 -69545630 + MER102a DNA MER1_type 10 151 -179 517 206 32 65 chr20 2608347 2608519 -69545363 - MIR SINE MIR -27 181 6 1451 187 74 0 chr20 2608539 2608796 -69545086 + MER66A LTR ERV1 1 276 -202 928 223 5 27 chr20 2608807 2609027 -69544855 - L1M4 LINE L1 -1191 4955 4741 248 173 0 19 chr20 2609031 2609083 -69544799 - Alu SINE Alu 0 302 252 * 1024 162 24 0 chr20 2609073 2609240 -69544642 + MER66A LTR ERV1 278 448 -30 337 293 83 32 chr20 2609233 2609390 -69544492 + MER102a DNA MER1_type 166 330 0 * 313 317 170 7 chr20 2609410 2609710 -69544172 + L2 LINE L2 2248 2596 -718 186 212 0 0 chr20 2609778 2609811 -69544071 + MIR SINE MIR 117 149 -113 222 175 0 0 chr20 2610164 2610204 -69543678 + L2 LINE L2 3024 3063 -250 4516 150 41 18 chr20 2610204 2611055 -69542827 - L1MB8 LINE L1 0 6178 5308 673 170 0 0 chr20 2611056 2611168 -69542714 - FLAM_C SINE Alu -4 139 28 4412 186 22 75 chr20 2611220 2611852 -69542030 - L1MB8 LINE L1 -837 5309 4764 1479 191 33 26 chr20 2611852 2612156 -69541726 - AluJb SINE Alu -6 306 1 4412 186 22 75 chr20 2612156 2612688 -69541194 - L1MB8 LINE L1 -1382 4764 4206 2796 126 20 11 chr20 2612774 2613233 -69540649 - L1MB3 LINE L1 -7 6176 5714 233 143 0 0 chr20 2613234 2613269 -69540613 - 5S rRNA rRNA -85 36 2 932 117 0 0 chr20 2613271 2613408 -69540474 - L1MB3 LINE L1 -455 5728 5592 * 957 222 25 21 chr20 2613403 2613642 -69540240 - L1MB3 LINE L1 -1037 5109 4870 * 3098 209 14 64 chr20 2613610 2614481 -69539401 - L1MB8 LINE L1 -1980 4166 3340 2837 217 68 42 chr20 2614511 2614575 -69539307 - MER21B LTR ERV1 -70 793 732 192 77 0 0 chr20 2614575 2614601 -69539281 + (CAATT)n Simple_repeat Simple_repeat 1 26 0 2837 217 68 42 chr20 2614601 2615291 -69538591 - MER21B LTR ERV1 -131 732 20 2356 225 47 19 chr20 2615313 2615546 -69538336 - L1MB8 LINE L1 -2804 3342 3117 2206 120 7 10 chr20 2615546 2615855 -69538027 - AluSx SINE Alu -4 308 1 2356 225 47 19 chr20 2615855 2616319 -69537563 - L1MB8 LINE L1 -3029 3117 2625 435 253 129 39 chr20 2616360 2616538 -69537344 + L2 LINE L2 3102 3295 -18 522 269 0 44 chr20 2616685 2616845 -69537037 - L2 LINE L2 0 3313 3161 180 316 0 0 chr20 2616933 2616990 -69536892 - L2 LINE L2 -309 2963 2907 188 255 121 64 chr20 2617181 2617322 -69536560 + L2 LINE L2 2949 3097 -175 476 263 60 0 chr20 2617521 2617654 -69536228 + MIR SINE MIR 2 142 -120 2037 137 17 0 chr20 2617655 2617948 -69535934 - AluSx SINE Alu -14 298 1 23 54 0 0 chr20 2617949 2617986 -69535896 + AT_rich Low_complexity Low_complexity 1 37 0 275 286 105 71 chr20 2618122 2618360 -69535522 + MIR SINE MIR 2 247 -15 2325 88 16 0 chr20 2618423 2618731 -69535151 - AluSq SINE Alu 0 313 1 1359 163 0 9 chr20 2618777 2618992 -69534890 - AluJb SINE Alu -15 297 85 432 252 17 17 chr20 2619803 2619918 -69533964 - MER5B DNA MER1_type 0 178 64 879 207 45 41 chr20 2619923 2620294 -69533588 + MLT1H LTR MaLR 1 496 -53 2358 110 0 0 chr20 2620344 2620644 -69533238 + AluSq SINE Alu 1 300 -13 337 274 42 0 chr20 2621223 2621318 -69532564 + MLT1I LTR MaLR 63 161 -248 2353 106 0 3 chr20 2621526 2621837 -69532045 - AluSg SINE Alu 0 310 1 2572 281 97 39 chr20 2621844 2622656 -69531226 - L2 LINE L2 -46 3267 2504 2397 79 3 0 chr20 2622656 2622948 -69530934 + AluSp SINE Alu 1 293 -20 2572 281 97 39 chr20 2622948 2623590 -69530292 - L2 LINE L2 -809 2504 1728 197 253 165 55 chr20 2623818 2623909 -69529973 - L2 LINE L2 -31 3241 3141 2194 108 3 0 chr20 2623932 2624228 -69529654 + AluSp SINE Alu 1 297 -16 729 239 17 60 chr20 2624500 2624734 -69529148 - MIR SINE MIR -11 251 28 1489 170 61 0 chr20 2624735 2624982 -69528900 - AluJb SINE Alu -50 262 1 2898 13 0 0 chr20 2625043 2625352 -69528530 + AluYa5 SINE Alu 3 311 0 618 201 27 85 chr20 2625806 2626030 -69527852 + L1MC5 LINE L1 7639 7849 -112 43988 44 5 2 chr20 2626683 2632816 -69521066 + L1PA4 LINE L1 3 6155 0 2493 63 3 3 chr20 2632839 2633142 -69520740 + AluSp SINE Alu 1 303 -10 187 370 0 0 chr20 2633320 2633393 -69520489 - MIR SINE MIR 0 262 190 382 191 61 69 chr20 2633570 2633701 -69520181 + L1MC5 LINE L1 7800 7929 -32 359 102 0 102 chr20 2635442 2635530 -69518352 + FRAM/FAM SINE Alu 1 78 -88 25 31 0 0 chr20 2635535 2635567 -69518315 + AT_rich Low_complexity Low_complexity 1 32 0 2217 225 86 22 chr20 2635652 2636318 -69517564 + MER67C LTR ERV1 3 710 0 3040 112 38 42 chr20 2636534 2636960 -69516922 - LOR1a LTR ERV1 0 497 72 1976 153 13 3 chr20 2636960 2637267 -69516615 - AluJb SINE Alu -2 310 1 3040 112 38 42 chr20 2637267 2637339 -69516543 - LOR1a LTR ERV1 -425 72 1 398 171 13 0 chr20 2637463 2637539 -69516343 + L1MC1 LINE L1 6257 6333 0 3377 224 62 4 chr20 2637645 2638586 -69515296 + L1MC4a LINE L1 4009 5064 -1082 1548 91 0 0 chr20 2638586 2638773 -69515109 + AluSg/x SINE Alu 111 297 -15 614 212 114 61 chr20 2639174 2639419 -69514463 + MLT1J LTR MaLR 162 419 -92 623 192 64 8 chr20 2639419 2639544 -69514338 - AluJb SINE Alu -179 133 2 405 224 41 0 chr20 2639547 2639645 -69514237 + MLT1J LTR MaLR 410 511 0 721 251 18 0 chr20 2639685 2639848 -69514034 + MER5B DNA MER1_type 1 166 -12 548 310 138 30 chr20 2639855 2640281 -69513601 + MLT1L LTR MaLR 144 615 0 244 226 117 109 chr20 2640338 2640350 -69513532 + L1MC4a LINE L1 5664 5674 -2134 1266 107 107 10 chr20 2640350 2640556 -69513326 - MER30 DNA MER1_type -1 229 4 244 226 117 109 chr20 2640556 2640639 -69513243 + L1MC4a LINE L1 5674 5755 -2053 1714 94 150 4 chr20 2640639 2640893 -69512989 + AluSx SINE Alu 1 291 -11 244 226 117 109 chr20 2640893 2641053 -69512829 + L1MC4a LINE L1 5755 5922 -1886 225 0 0 0 chr20 2641096 2641121 -69512761 + (TG)n Simple_repeat Simple_repeat 2 26 0 36 0 0 0 chr20 2641202 2641238 -69512644 + AT_rich Low_complexity Low_complexity 1 36 0 460 213 9 19 chr20 2642053 2642161 -69511721 + LTR16A1 LTR ERVL 19 125 -332 968 224 40 0 chr20 2642198 2642426 -69511456 + LTR16A1 LTR ERVL 221 457 0 434 198 41 83 chr20 2642619 2642703 -69511179 - Charlie4a DNA MER1_type -1453 508 429 2415 64 10 3 chr20 2642703 2643000 -69510882 + AluY SINE Alu 1 299 -12 434 198 41 83 chr20 2643000 2643036 -69510846 - Charlie4a DNA MER1_type -1532 429 393 1189 191 37 0 chr20 2643050 2643265 -69510617 + AluJo SINE Alu 82 304 -8 1392 208 41 19 chr20 2643271 2643589 -69510293 - Charlie4a DNA MER1_type -167 341 17 1778 81 0 0 chr20 2644213 2644434 -69509448 + AluSx SINE Alu 1 221 -91 428 322 76 12 chr20 2644873 2645044 -69508838 - MER5A DNA MER1_type -1 188 7 2056 40 84 71 chr20 2645121 2645417 -69508465 + AluY SINE Alu 1 300 -11 1322 140 15 0 chr20 2645429 2645629 -69508253 - AluJb SINE Alu -23 289 87 2006 118 9 43 chr20 2647321 2647505 -69506377 - AluSx SINE Alu 0 312 142 2286 99 0 13 chr20 2647505 2647808 -69506074 - AluSg SINE Alu -9 301 3 2006 118 9 43 chr20 2647808 2647946 -69505936 - AluSx SINE Alu -170 142 1 853 218 96 13 chr20 2648268 2648497 -69505385 - MLT1C LTR MaLR 0 467 220 498 163 23 0 chr20 2648557 2648643 -69505239 - MLT1C LTR MaLR -383 122 35 199 363 62 27 chr20 2648729 2648875 -69505007 + L2 LINE L2 3116 3266 -6 1840 100 0 4 chr20 2649028 2649268 -69504614 + AluSx SINE Alu 44 282 -30 285 29 0 0 chr20 2649271 2649305 -69504577 + (CA)n Simple_repeat Simple_repeat 1 34 0 2112 87 24 13 chr20 2656530 2656828 -69497054 + AluSg SINE Alu 1 301 -9 367 207 96 67 chr20 2657280 2657415 -69496467 - MER5B DNA MER1_type -35 143 5 208 139 0 0 chr20 2658459 2658495 -69495387 + (T)n Simple_repeat Simple_repeat 1 36 0 1877 90 94 4 chr20 2659314 2659580 -69494302 + AluSx SINE Alu 23 312 0 245 219 0 16 chr20 2659656 2659720 -69494162 + (TA)n Simple_repeat Simple_repeat 2 64 0 191 186 0 93 chr20 2660009 2660052 -69493830 + L3 LINE CR1 596 634 -943 267 304 163 11 chr20 2660329 2660513 -69493369 + MLT1H1 LTR MaLR 334 545 -10 354 260 106 0 chr20 2660521 2660625 -69493257 + MIR SINE MIR 39 153 -55 246 234 0 0 chr20 2660631 2660678 -69493204 - L2 LINE L2 0 3272 3226 203 189 0 0 chr20 2660690 2660727 -69493155 + L2 LINE L2 3264 3300 -13 1754 160 35 3 chr20 2660853 2661140 -69492742 - AluJo SINE Alu -16 296 1 1085 104 0 0 chr20 2661140 2661275 -69492607 - AluSq/x SINE Alu -177 135 1 358 59 59 0 chr20 2661275 2661326 -69492556 - L1MA2 LINE L1 -473 5831 5778 1749 100 80 12 chr20 2661327 2661478 -69492404 - AluSg SINE Alu -9 301 125 2387 66 0 7 chr20 2661478 2661835 -69492047 - AluY SINE Alu 0 311 1 1749 100 80 12 chr20 2661835 2661933 -69491949 - AluSg SINE Alu -185 125 35 1090 113 7 0 chr20 2661936 2662086 -69491796 - AluSq/x SINE Alu -161 151 1 594 80 0 10 chr20 2662086 2662186 -69491696 - L1MA2 LINE L1 -939 5366 5268 855 111 0 22 chr20 2662187 2662322 -69491560 + MER46A DNA MER2_type 105 236 0 2229 92 7 0 chr20 2663037 2663368 -69490514 + AluSx SINE Alu 1 333 0 282 295 62 16 chr20 2663755 2663884 -69489998 - MIR SINE MIR -1 261 127 1845 145 35 10 chr20 2664156 2664445 -69489437 - AluJb SINE Alu -16 296 1 526 293 98 5 chr20 2664445 2664643 -69489239 - L1MEc LINE L1 -4023 2373 2154 2174 124 7 0 chr20 2664679 2664977 -69488905 - AluSp SINE Alu -13 300 1 21 0 0 0 chr20 2664988 2665009 -69488873 + AT_rich Low_complexity Low_complexity 1 21 0 264 320 32 48 chr20 2665011 2665037 -69488845 - L1MEc LINE L1 -5574 631 606 2616 138 16 36 chr20 2665037 2665480 -69488402 + Tigger2a DNA MER2_type 1 434 0 264 320 32 48 chr20 2665480 2665578 -69488304 - L1MEc LINE L1 -5599 606 509 250 215 25 63 chr20 2665726 2665805 -69488077 + LTR16A1 LTR ERVL 3 78 -379 2541 96 0 0 chr20 2666068 2666380 -69487502 - AluSx SINE Alu 0 312 1 2848 181 29 22 chr20 2666431 2666984 -69486898 + MLT1F1 LTR MaLR 11 567 0 618 171 99 9 chr20 2668271 2668382 -69485500 - FLAM_C SINE Alu -21 122 2 1912 154 25 0 chr20 2668387 2668673 -69485209 - AluJo SINE Alu -19 293 1 188 368 84 0 chr20 2669575 2669670 -69484212 + MIR SINE MIR 86 188 -74 476 230 62 19 chr20 2669939 2670100 -69483782 + MLT1J2 LTR MaLR 269 436 -14 2067 108 3 46 chr20 2670187 2670493 -69483389 + AluSx SINE Alu 1 293 -19 263 61 0 0 chr20 2670711 2670744 -69483138 - U2 snRNA snRNA -155 33 1 7098 118 60 23 chr20 2670844 2671288 -69482594 - Tigger3b DNA MER2_type -1801 1227 801 2319 83 0 3 chr20 2671288 2671577 -69482305 + AluSg SINE Alu 1 288 -22 7098 118 60 23 chr20 2671577 2672114 -69481768 - Tigger3b DNA MER2_type -2227 801 192 2424 52 0 52 chr20 2672114 2672423 -69481459 - AluY SINE Alu -18 293 1 7098 118 60 23 chr20 2672423 2672621 -69481261 - Tigger3b DNA MER2_type -2836 192 3 342 263 224 17 chr20 2672640 2672819 -69481063 - MIR SINE MIR -13 249 34 2303 92 7 3 chr20 2673081 2673376 -69480506 - AluSx SINE Alu -16 296 1 1994 93 56 15 chr20 2673572 2673864 -69480018 + AluSc SINE Alu 1 303 0 357 24 0 0 chr20 2673981 2674023 -69479859 + (TG)n Simple_repeat Simple_repeat 2 43 0 230 343 29 64 chr20 2674878 2675050 -69478832 - MIR SINE MIR -11 251 86 225 275 0 66 chr20 2675739 2675830 -69478052 - MIR SINE MIR -112 150 66 6925 211 48 58 chr20 2676504 2677594 -69476288 + L1ME3A LINE L1 5 1104 -5540 2345 95 10 3 chr20 2677594 2677898 -69475984 + AluSg SINE Alu 1 306 -4 6925 211 48 58 chr20 2677898 2678245 -69475637 + L1ME3A LINE L1 1104 1453 -5191 1590 120 5 0 chr20 2678245 2678461 -69475421 + AluSg/x SINE Alu 82 298 -12 6925 211 48 58 chr20 2678461 2679638 -69474244 + L1ME3A LINE L1 1453 2804 -3840 1723 200 3 7 chr20 2679638 2679943 -69473939 - AluJo SINE Alu -8 304 1 6925 211 48 58 chr20 2679943 2680262 -69473620 + L1ME3A LINE L1 2804 3124 -3520 952 247 9 9 chr20 2680471 2680694 -69473188 - MER58A DNA MER1_type -1 223 1 721 303 17 6 chr20 2680733 2680908 -69472974 + MER91A DNA MER1_type 19 195 -1 2653 34 0 0 chr20 2681368 2681662 -69472220 - AluY SINE Alu -17 294 1 2298 124 27 24 chr20 2681663 2682035 -69471847 - THE1C LTR MaLR -2 373 1 562 307 99 16 chr20 2682041 2682299 -69471583 + L1ME3A LINE L1 4795 5079 -1565 2348 111 0 0 chr20 2682299 2682597 -69471285 - AluSx SINE Alu -14 298 1 562 307 99 16 chr20 2682597 2682643 -69471239 + L1ME3A LINE L1 5079 5120 -1524 483 292 92 41 chr20 2682695 2683086 -69470796 + L1ME LINE L1 863 1273 -5658 2421 139 37 49 chr20 2683259 2683691 -69470191 + LTR3 LTR ERVK 3 429 0 1319 236 275 13 chr20 2683850 2684312 -69469570 + MLT1G1 LTR MaLR 13 595 0 271 260 113 40 chr20 2684364 2684593 -69469289 + L1ME LINE L1 1264 1479 -4944 564 306 71 3 chr20 2684646 2684943 -69468939 + L1ME3A LINE L1 6056 6372 -296 324 297 65 36 chr20 2684979 2685117 -69468765 + HAL1 LINE L1 2292 2433 -74 283 268 14 0 chr20 2685384 2685455 -69468427 - L2 LINE L2 -5 3267 3196 563 195 371 0 chr20 2685789 2685999 -69467883 + LTR16C LTR ERVL 202 489 -2 2196 109 10 3 chr20 2686933 2687227 -69466655 - AluSx SINE Alu -16 296 1 634 186 83 0 chr20 2687297 2687453 -69466429 - MER3 DNA MER1_type -79 130 9 306 195 25 200 chr20 2687480 2687680 -69466202 + MIR SINE MIR 89 253 -9 2246 105 0 40 chr20 2687774 2688097 -69465785 - AluSx SINE Alu -2 310 1 1709 222 68 44 chr20 2688098 2688557 -69465325 + Cheshire DNA MER1_type 42 511 -1909 542 154 94 8 chr20 2688557 2688674 -69465208 - MLT1D LTR MaLR 0 505 379 349 252 8 76 chr20 2688676 2688795 -69465087 - MLT1-int LTR MaLR -247 1124 1014 1515 108 10 0 chr20 2688797 2689001 -69464881 - AluSq SINE Alu -12 301 96 434 192 69 23 chr20 2689046 2689097 -69464785 - MLT1D LTR MaLR -259 246 199 2430 88 0 3 chr20 2689097 2689402 -69464480 - AluSg SINE Alu -6 304 1 434 192 69 23 chr20 2689402 2689480 -69464402 - MLT1D LTR MaLR -306 199 111 843 209 5 56 chr20 2689481 2689696 -69464186 - MLT1D-int LTR MaLR -207 1164 961 850 273 5 0 chr20 2689838 2690047 -69463835 - MLT1D-int LTR MaLR -488 883 674 1079 174 4 85 chr20 2690106 2690365 -69463517 - MLT1D-int LTR MaLR -711 660 423 1147 181 0 0 chr20 2690375 2690552 -69463330 - AluJb SINE Alu -1 311 135 1187 253 57 38 chr20 2690980 2691403 -69462479 + LTR47B LTR ERVL 13 443 0 345 214 34 0 chr20 2691424 2691513 -69462369 + MER96 DNA MER1_type? 1 92 -83 283 272 0 72 chr20 2691606 2691731 -69462151 + MER103 DNA DNA 50 165 -1 728 213 64 50 chr20 2692076 2692131 -69461751 - MER3 DNA MER1_type 0 209 156 2803 99 60 26 chr20 2692131 2692472 -69461410 + L1MA4 LINE L1 5818 6181 -119 2112 147 0 0 chr20 2692472 2692772 -69461110 + AluSx SINE Alu 1 300 -12 2803 99 60 26 chr20 2692772 2692893 -69460989 + L1MA4 LINE L1 6181 6296 -4 728 213 64 50 chr20 2692893 2693039 -69460843 - MER3 DNA MER1_type -53 156 5 333 221 19 32 chr20 2693882 2694036 -69459846 + CT-rich Low_complexity Low_complexity 3 154 0 306 314 66 16 chr20 2694119 2694240 -69459642 - MIR3 SINE MIR -46 162 36 201 121 0 0 chr20 2694348 2694381 -69459501 + (GA)n Simple_repeat Simple_repeat 2 34 0 2202 108 7 0 chr20 2695152 2695438 -69458444 - AluSx SINE Alu -20 292 5 29 28 0 0 chr20 2695446 2695482 -69458400 + AT_rich Low_complexity Low_complexity 1 36 0 374 258 122 52 chr20 2695497 2695875 -69458007 - L1M4 LINE L1 -1038 5108 4701 1704 162 88 0 chr20 2695875 2696159 -69457723 - AluJo SINE Alu -3 309 1 374 258 122 52 chr20 2696159 2696229 -69457653 - L1M4 LINE L1 -1445 4701 4637 1029 140 0 0 chr20 2698518 2698696 -69455186 + (TCCA)n Simple_repeat Simple_repeat 1 178 0 197 381 69 38 chr20 2698704 2698995 -69454887 - L2 LINE L2 -2 3270 2971 54 49 0 0 chr20 2699746 2699828 -69454054 + AT_rich Low_complexity Low_complexity 1 82 0 2246 94 10 19 chr20 2700334 2700641 -69453241 + AluSg SINE Alu 1 304 -6 254 269 148 34 chr20 2701310 2701459 -69452423 + MIR SINE MIR 26 191 -71 287 281 31 31 chr20 2701525 2701621 -69452261 - L2 LINE L2 -19 3294 3199 2188 124 0 0 chr20 2701855 2702192 -69451690 + AluSx SINE Alu 1 337 0 2382 88 13 3 chr20 2702334 2702640 -69451242 - AluSq SINE Alu -4 309 1 23 0 0 0 chr20 2702693 2702716 -69451166 + AT_rich Low_complexity Low_complexity 1 23 0 228 67 0 0 chr20 2703572 2703602 -69450280 + (A)n Simple_repeat Simple_repeat 1 30 0 363 260 32 76 chr20 2703701 2703923 -69449959 + HAL1b LINE L1 59 263 -1085 2295 106 0 0 chr20 2703923 2704232 -69449650 + AluSx SINE Alu 1 309 0 363 260 32 76 chr20 2704232 2704350 -69449532 + HAL1b LINE L1 263 385 -963 249 286 66 22 chr20 2704419 2704510 -69449372 - L1MEd LINE L1 -5448 671 577 1788 126 74 95 chr20 2704809 2705189 -69448693 + MLT1B LTR MaLR 3 374 -16 2766 197 134 41 chr20 2705265 2706001 -69447881 - MER21B LTR ERV1 -58 805 1 363 310 57 7 chr20 2706907 2707135 -69446747 - L1MEc LINE L1 -3860 2394 2152 737 248 142 77 chr20 2707212 2707655 -69446227 - MLT1H LTR MaLR -64 485 14 352 322 76 9 chr20 2707746 2707957 -69445925 + L1M4 LINE L1 4712 4936 -1210 212 307 60 53 chr20 2708582 2708637 -69445245 - MIR SINE MIR -13 249 196 2184 98 35 0 chr20 2708637 2708924 -69444958 - AluSp SINE Alu -16 297 1 212 307 60 53 chr20 2708924 2709018 -69444864 - MIR SINE MIR -66 196 99 731 186 69 72 chr20 2709018 2709092 -69444790 - L1M4 LINE L1 -1546 4600 4527 1165 208 23 0 chr20 2709092 2709308 -69444574 - MER58A DNA MER1_type -3 221 1 731 186 69 72 chr20 2709308 2709468 -69444414 - L1M4 LINE L1 -1619 4527 4365 2264 99 6 43 chr20 2709468 2709646 -69444236 - AluSx SINE Alu 0 312 150 2424 74 0 7 chr20 2709646 2709942 -69443940 - AluY SINE Alu -17 294 1 2264 99 6 43 chr20 2709942 2710087 -69443795 - AluSx SINE Alu -162 150 1 731 186 69 72 chr20 2710087 2710157 -69443725 - L1M4 LINE L1 -1781 4365 4296 272 121 40 20 chr20 2710741 2710939 -69442943 + AluJo SINE Alu 1 302 0 180 0 0 0 chr20 2711167 2711187 -69442695 + (T)n Simple_repeat Simple_repeat 1 20 0 849 158 0 8 chr20 2711211 2711344 -69442538 - AluSg/x SINE Alu -26 284 153 559 86 0 0 chr20 2711344 2711414 -69442468 + AluSq/x SINE Alu 59 128 -185 201 39 0 0 chr20 2711601 2711627 -69442255 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 2008 109 33 7 chr20 2711775 2712088 -69441794 + AluSx SINE Alu 1 320 0 719 73 0 0 chr20 2712279 2712375 -69441507 - L1PB1 LINE L1 0 6151 6056 655 236 43 0 chr20 2712410 2712571 -69441311 + MER5B DNA MER1_type 5 172 -6 2031 135 0 32 chr20 2712685 2712997 -69440885 + AluSq SINE Alu 1 302 -11 348 24 0 0 chr20 2713724 2713765 -69440117 + (CA)n Simple_repeat Simple_repeat 2 42 0 2320 96 0 3 chr20 2713832 2714133 -69439749 - AluSx SINE Alu -12 300 1 231 152 0 0 chr20 2714137 2714183 -69439699 + MADE1 DNA Mariner 35 80 0 419 289 14 7 chr20 2715166 2715308 -69438574 + L2 LINE L2 2869 3011 -302 2177 139 0 0 chr20 2715955 2716257 -69437625 + AluSx SINE Alu 1 302 -10 280 322 100 31 chr20 2716457 2716848 -69437034 - L2 LINE L2 -337 2977 2560 1682 146 90 36 chr20 2717126 2717482 -69436400 + THE1C LTR MaLR 1 375 0 2236 116 7 0 chr20 2718317 2718611 -69435271 - AluSq SINE Alu -17 296 1 277 186 0 17 chr20 2718641 2718700 -69435182 - L1ME4a LINE L1 -4 6117 6060 1919 154 3 13 chr20 2718703 2719060 -69434822 - AluJb SINE Alu 0 354 1 281 296 52 28 chr20 2719072 2719389 -69434493 - L1ME4a LINE L1 -80 6041 5659 283 294 110 41 chr20 2719396 2719985 -69433897 - L1ME4a LINE L1 -1548 4598 3969 846 248 24 16 chr20 2720267 2720513 -69433369 - L1ME3A LINE L1 -219 5951 5704 314 302 8 31 chr20 2720399 2720514 -69433368 - L1PA8A LINE L1 -313 5818 5705 * 2431 69 0 0 chr20 2720514 2720804 -69433078 + AluY SINE Alu 1 290 -21 314 302 8 31 chr20 2720804 2720817 -69433065 - L1PA8A LINE L1 -426 5705 5693 531 139 0 0 chr20 2721079 2721158 -69432724 + AluJb SINE Alu 38 116 -196 486 0 0 0 chr20 2721158 2721212 -69432670 + (CA)n Simple_repeat Simple_repeat 1 54 0 377 267 52 33 chr20 2721406 2721731 -69432151 + L1MEd LINE L1 1011 1347 -5025 285 51 0 0 chr20 2721760 2721799 -69432083 + (CA)n Simple_repeat Simple_repeat 2 40 0 335 250 38 50 chr20 2721808 2721951 -69431931 + L1MEd LINE L1 1251 1510 -4862 2295 180 90 14 chr20 2721960 2722524 -69431358 - MLT1E2 LTR MaLR -4 622 1 1986 101 3 20 chr20 2722570 2722876 -69431006 + L1MA8 LINE L1 5988 6288 -3 827 231 61 4 chr20 2722913 2723190 -69430692 + L1M4 LINE L1 3579 3871 -2275 306 263 100 50 chr20 2723344 2723664 -69430218 + L1MEd LINE L1 2910 3245 -3137 2586 140 34 5 chr20 2723681 2724095 -69429787 + MSTB LTR MaLR 1 426 0 679 251 40 87 chr20 2724095 2724441 -69429441 + MLT1E-int LTR MaLR 1037 1366 -5 1166 239 50 119 chr20 2724446 2725083 -69428799 + MLT1E LTR MaLR 1 593 0 1866 209 33 72 chr20 2725140 2725688 -69428194 + L1ME1 LINE L1 5652 6334 0 2817 13 0 0 chr20 2726017 2726320 -69427562 - AluYa5 SINE Alu -8 303 1 504 262 36 42 chr20 2726455 2726499 -69427383 - MER5B DNA MER1_type -1 177 134 1574 240 110 41 chr20 2726499 2726723 -69427159 - MLT1E LTR MaLR 0 593 386 2264 112 3 0 chr20 2726723 2727019 -69426863 + AluSg SINE Alu 1 297 -13 1574 240 110 41 chr20 2727019 2727349 -69426533 - MLT1E LTR MaLR -207 386 1 504 262 36 42 chr20 2727349 2727472 -69426410 - MER5B DNA MER1_type -44 134 11 2001 145 0 0 chr20 2727707 2727989 -69425893 + AluSx SINE Alu 1 282 -30 29 0 0 0 chr20 2727995 2728024 -69425858 + AT_rich Low_complexity Low_complexity 1 29 0 852 226 0 0 chr20 2729736 2729891 -69423991 + FRAM SINE Alu 1 155 -21 322 113 81 0 chr20 2730163 2730225 -69423657 + MADE1 DNA Mariner 2 68 -12 255 24 122 0 chr20 2730269 2730310 -69423572 + MADE1 DNA Mariner 35 80 0 267 348 56 17 chr20 2730582 2730760 -69423122 - MIR SINE MIR -39 223 39 2185 110 0 7 chr20 2730763 2731106 -69422776 + AluSx SINE Alu 5 345 0 2195 109 3 0 chr20 2732159 2732444 -69421438 - AluSx SINE Alu -26 286 1 1647 122 76 11 chr20 2732580 2732843 -69421039 - AluJb SINE Alu -22 290 11 982 112 0 0 chr20 2733142 2733267 -69420615 + AluSq/x SINE Alu 1 125 -187 2313 104 3 0 chr20 2733275 2733582 -69420300 + AluSx SINE Alu 1 308 -4 507 206 71 0 chr20 2734838 2734964 -69418918 + L1MB1 LINE L1 6034 6168 0 305 346 66 50 chr20 2734971 2735289 -69418593 + L1MC/D LINE L1 5415 5737 -2071 344 294 85 103 chr20 2735367 2735459 -69418423 + L1M4 LINE L1 3211 3303 -2843 2130 104 49 0 chr20 2735459 2735746 -69418136 + AluSx SINE Alu 3 303 -9 344 294 85 103 chr20 2735746 2736276 -69417606 + L1M4 LINE L1 3303 3822 -2324 537 345 96 26 chr20 2736295 2736623 -69417259 + L1M4 LINE L1 3913 4217 -1929 2699 45 0 0 chr20 2736623 2736934 -69416948 + AluY SINE Alu 1 311 0 537 345 96 26 chr20 2736934 2737333 -69416549 + L1M4 LINE L1 4217 4691 -1455 646 166 0 146 chr20 2737360 2737565 -69416317 + FAM SINE Alu 1 42 -7 356 280 0 11 chr20 2738418 2738511 -69415371 + L2 LINE L2 3192 3283 -30 513 158 0 192 chr20 2738559 2738635 -69415247 + MLT1E3 LTR MaLR 51 75 -551 833 147 8 0 chr20 2738635 2738764 -69415118 - FLAM_C SINE Alu -3 130 1 513 158 0 192 chr20 2738764 2738864 -69415018 + MLT1E3 LTR MaLR 75 193 -433 6642 182 20 11 chr20 2738864 2738931 -69414951 - L1P4 LINE L1 -573 5593 5528 212 0 36 0 chr20 2738931 2738959 -69414923 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 6642 182 20 11 chr20 2738959 2740052 -69413830 - L1P4 LINE L1 -638 5528 4411 189 0 0 0 chr20 2740052 2740073 -69413809 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 6642 182 20 11 chr20 2740073 2740570 -69413312 - L1P4 LINE L1 -1755 4411 3920 1115 209 26 9 chr20 2740638 2740868 -69413014 + MLT1E3 LTR MaLR 391 624 0 529 172 11 11 chr20 2740866 2740959 -69412923 - Tigger5 DNA MER2_type 0 2323 2231 * 297 197 42 14 chr20 2741002 2741073 -69412809 - Tigger5 DNA MER2_type 0 2323 2251 * 298 231 0 0 chr20 2741042 2741094 -69412788 - Tigger5 DNA MER2_type -2268 55 4 483 238 89 55 chr20 2741201 2741403 -69412479 - MER63A DNA MER1_type 0 210 2 5386 175 160 110 chr20 2742173 2742785 -69411097 - L1MDa LINE L1 -4715 1825 1245 820 163 7 14 chr20 2742785 2742926 -69410956 + FLAM_C SINE Alu 2 141 -2 5386 175 160 110 chr20 2742926 2743894 -69409988 - L1MDa LINE L1 -5295 1245 18 350 239 148 21 chr20 2744165 2744307 -69409575 - MIR SINE MIR 0 262 103 2097 139 7 0 chr20 2744423 2744724 -69409158 - AluSx SINE Alu -8 304 2 777 122 0 16 chr20 2744962 2745085 -69408797 + FLAM_C SINE Alu 23 143 0 718 237 137 19 chr20 2745086 2745297 -69408585 + MIR SINE MIR 23 258 -4 190 273 62 62 chr20 2745441 2745569 -69408313 - L2 LINE L2 -229 3043 2916 2499 67 0 0 chr20 2746033 2746332 -69407550 + AluY SINE Alu 1 299 -12 684 215 14 96 chr20 2746373 2746433 -69407449 - MER3 DNA MER1_type -8 201 138 1071 150 45 0 chr20 2746433 2746455 -69407427 - L1MA8 LINE L1 0 6291 6271 1634 178 3 3 chr20 2746455 2746748 -69407134 + AluJo SINE Alu 1 293 -19 1071 150 45 0 chr20 2746748 2746945 -69406937 - L1MA8 LINE L1 -20 6271 6062 684 215 14 96 chr20 2746945 2747103 -69406779 - MER3 DNA MER1_type -71 138 1 2121 104 0 0 chr20 2747509 2747806 -69406076 - AluSx SINE Alu -2 310 14 2149 213 31 9 chr20 2748862 2749412 -69404470 - Charlie5 DNA MER1_type 0 2624 2063 645 195 42 0 chr20 2749408 2749526 -69404356 - MER3 DNA MER1_type -55 154 32 * 2384 70 0 0 chr20 2749629 2749927 -69403955 - AluY SINE Alu -13 298 1 246 247 52 0 chr20 2751172 2751249 -69402633 - MIR3 SINE MIR -15 193 113 658 153 105 8 chr20 2752142 2752266 -69401616 + MER39 LTR ERV1 5 140 -567 1364 193 96 12 chr20 2752284 2752606 -69401276 + MER39 LTR ERV1 357 705 -2 275 176 78 0 chr20 2752664 2752715 -69401167 + L1MC2 LINE L1 351 405 -6021 1608 120 0 4 chr20 2752717 2752958 -69400924 + AluSg/x SINE Alu 66 305 -7 9248 201 90 43 chr20 2752962 2753728 -69400154 + L1MC2 LINE L1 937 1666 -4958 1315 177 135 0 chr20 2753728 2753994 -69399888 - AluJo SINE Alu 0 302 1 9248 201 90 43 chr20 2753994 2754104 -69399778 + L1MC2 LINE L1 1666 1769 -4855 2113 107 27 0 chr20 2754104 2754404 -69399478 + AluSg SINE Alu 1 308 -2 9248 201 90 43 chr20 2754404 2755102 -69398780 + L1MC2 LINE L1 1769 2433 -4191 2163 113 0 0 chr20 2755102 2755411 -69398471 + AluSx SINE Alu 1 309 -3 9248 201 90 43 chr20 2755411 2756176 -69397706 + L1MC2 LINE L1 2433 3161 -3463 289 116 0 0 chr20 2756176 2756219 -69397663 - Alu SINE Alu -11 291 249 9248 201 90 43 chr20 2756219 2756296 -69397586 + L1MC2 LINE L1 3161 3233 -3391 2231 85 3 10 chr20 2756296 2756602 -69397280 + AluSq SINE Alu 1 304 -9 9248 201 90 43 chr20 2756602 2757667 -69396215 + L1MC2 LINE L1 3233 4247 -2377 1807 154 17 0 chr20 2757667 2757965 -69395917 + AluSx SINE Alu 1 303 -9 9248 201 90 43 chr20 2757965 2758209 -69395673 + L1MC2 LINE L1 4247 4478 -2146 1479 182 27 24 chr20 2758209 2758506 -69395376 - AluJo SINE Alu -14 298 1 9248 201 90 43 chr20 2758506 2760106 -69393776 + L1MC2 LINE L1 4478 6556 -68 938 167 0 0 chr20 2760108 2760270 -69393612 - AluJb SINE Alu -4 308 147 2052 117 0 7 chr20 2760283 2760582 -69393300 - AluSx SINE Alu -15 297 1 353 129 71 0 chr20 2760586 2760656 -69393226 + L1MC2 LINE L1 6550 6624 0 1858 113 0 0 chr20 2760766 2761022 -69392860 - AluSx SINE Alu -56 256 1 1246 195 75 10 chr20 2761127 2761419 -69392463 + AluJo SINE Alu 1 311 -1 375 232 66 13 chr20 2761429 2761580 -69392302 + MER110A-int LTR ERV1 1308 1466 -3470 2260 96 3 0 chr20 2761814 2762126 -69391756 - AluSp SINE Alu 0 313 1 446 178 89 32 chr20 2762491 2762648 -69391234 + MER110A-int LTR ERV1 2208 2373 -2563 547 256 63 63 chr20 2762846 2763116 -69390766 + MER110A-int LTR ERV1 2797 3066 -1870 232 271 24 38 chr20 2763255 2763347 -69390535 + MER5A DNA MER1_type 1 102 -87 759 218 68 34 chr20 2763778 2763984 -69389898 + MER110A-int LTR ERV1 2754 2966 -1681 1715 218 95 18 chr20 2764075 2764516 -69389366 + MER110A-int LTR ERV1 3124 3598 -1049 322 242 67 25 chr20 2764516 2764636 -69389246 - L1M4 LINE L1 -2949 3197 3073 816 94 0 35 chr20 2764643 2764813 -69389069 + (TTC)n Simple_repeat Simple_repeat 2 165 0 1534 206 87 30 chr20 2764816 2765209 -69388673 + MER110A-int LTR ERV1 3611 4025 -622 207 114 0 0 chr20 2765229 2765264 -69388618 + (TATG)n Simple_repeat Simple_repeat 2 36 0 850 237 0 0 chr20 2765271 2765427 -69388455 - AluJo/FRAM SINE Alu -25 287 132 1421 160 113 7 chr20 2765430 2765705 -69388177 - AluJo SINE Alu -8 304 1 2530 207 25 30 chr20 2765735 2766267 -69387615 + MER110A-int LTR ERV1 4051 4581 -66 2163 87 3 45 chr20 2766267 2766579 -69387303 + AluSx SINE Alu 1 299 -13 2530 207 25 30 chr20 2766579 2766615 -69387267 + MER110A-int LTR ERV1 4581 4616 -31 980 223 168 59 chr20 2766744 2767166 -69386716 + MER110A LTR ERV1 1 468 0 2187 120 0 0 chr20 2767220 2767528 -69386354 - AluSx SINE Alu -4 308 1 1307 73 23 0 chr20 2767607 2767784 -69386098 + AluSg/x SINE Alu 117 297 -15 633 211 121 115 chr20 2767886 2768425 -69385457 + MER34 LTR ERV1 1 542 0 340 281 143 70 chr20 2768537 2768810 -69385072 + L1ME LINE L1 5335 5656 -465 2095 127 0 6 chr20 2768810 2769124 -69384758 - AluSx SINE Alu 0 312 1 340 281 143 70 chr20 2769124 2769306 -69384576 + L1ME LINE L1 5656 5823 -298 2020 122 14 0 chr20 2769809 2770104 -69383778 - AluSx SINE Alu -13 299 1 2202 101 3 3 chr20 2770194 2770502 -69383380 + AluSg SINE Alu 1 308 -2 209 312 64 16 chr20 2772864 2772989 -69380893 + L2 LINE L2 2956 3086 -186 324 297 102 0 chr20 2773598 2773726 -69380156 - MIR SINE MIR -74 188 48 812 170 0 0 chr20 2774359 2774494 -69379388 + FLAM_C SINE Alu 9 143 0 1219 213 100 68 chr20 2774759 2775185 -69378697 + Charlie4a DNA MER1_type 3 448 -1513 1982 124 24 0 chr20 2775185 2775483 -69378399 + AluSx SINE Alu 1 305 -7 1219 213 100 68 chr20 2775483 2775545 -69378337 + Charlie4a DNA MER1_type 448 507 -1 771 103 0 0 chr20 2776035 2776152 -69377730 - AluY SINE Alu -4 307 191 261 277 60 0 chr20 2776298 2776381 -69377501 - L2 LINE L2 -25 3288 3201 282 353 67 0 chr20 2776696 2776815 -69377067 - MIR SINE MIR -16 246 120 768 270 140 32 chr20 2776990 2777398 -69376484 + LTR16A1 LTR ERVL 2 453 -4 3710 209 32 2 chr20 2777742 2778573 -69375309 - MER45B DNA AcHobo 0 1040 142 327 66 16 33 chr20 2778577 2778638 -69375244 + (TTCTCC)n Simple_repeat Simple_repeat 3 62 0 1101 227 4 34 chr20 2778644 2778772 -69375110 - AluJb SINE Alu -51 261 131 2098 134 3 0 chr20 2778772 2779077 -69374805 - AluSx SINE Alu -6 306 1 2128 118 0 13 chr20 2779081 2779395 -69374487 - AluSx SINE Alu -2 310 1 1101 227 4 34 chr20 2779395 2779530 -69374352 - AluJb SINE Alu -184 128 1 424 212 0 117 chr20 2779532 2779562 -69374320 - MER45B DNA AcHobo -918 122 90 2161 86 20 0 chr20 2779562 2779854 -69374028 + AluSx SINE Alu 1 298 -14 424 212 0 117 chr20 2779854 2779960 -69373922 - MER45B DNA AcHobo -950 90 2 427 275 150 15 chr20 2780001 2780201 -69373681 - MIR SINE MIR -34 228 2 273 379 86 8 chr20 2780216 2780578 -69373304 + L2 LINE L2 2579 2968 -346 317 306 18 18 chr20 2782112 2782223 -69371659 + MIR SINE MIR 88 198 -64 369 295 0 9 chr20 2783055 2783167 -69370715 - HAL1 LINE L1 -1649 858 748 795 259 0 11 chr20 2783168 2783353 -69370529 - MER20 DNA MER1_type 0 219 37 654 309 74 8 chr20 2783405 2783661 -69370221 - HAL1 LINE L1 -1753 754 482 490 149 0 0 chr20 2783748 2783835 -69370047 - L1MB7 LINE L1 -7 6177 6091 3558 122 22 76 chr20 2783928 2784072 -69369810 + MER41B LTR ERV1 1 151 -484 2186 88 27 0 chr20 2784072 2784368 -69369514 + AluSx SINE Alu 9 312 0 3558 122 22 76 chr20 2784368 2784894 -69368988 + MER41B LTR ERV1 151 635 0 523 93 289 0 chr20 2785592 2785689 -69368193 + FLAM_C SINE Alu 4 128 -5 1518 148 38 4 chr20 2786171 2786434 -69367448 - AluJb SINE Alu -29 283 12 611 51 51 0 chr20 2786484 2786563 -69367319 - AluSg/x SINE Alu -11 298 216 459 92 15 0 chr20 2786563 2786628 -69367254 - MER41A LTR ERV1 0 554 489 1095 135 0 0 chr20 2786635 2786805 -69367077 + AluSg/x SINE Alu 134 303 -9 3802 121 28 2 chr20 2787029 2787592 -69366290 - MER41B LTR ERV1 -57 578 1 1408 147 0 9 chr20 2787592 2787816 -69366066 - AluJb SINE Alu -90 222 1 207 0 0 0 chr20 2789861 2789884 -69363998 + (TAAAA)n Simple_repeat Simple_repeat 1 23 0 21 0 0 0 chr20 2789982 2790003 -69363879 + AT_rich Low_complexity Low_complexity 1 21 0 828 148 0 16 chr20 2790003 2790131 -69363751 - FLAM_C SINE Alu -6 127 2 652 153 144 144 chr20 2790821 2791043 -69362839 - MLT2D LTR ERVL 0 414 193 231 345 0 0 chr20 2791084 2791197 -69362685 + (TTAGGG)n Simple_repeat Simple_repeat 6 118 0 1843 126 74 44 chr20 2791342 2791706 -69362176 - THE1C LTR MaLR 0 375 1 1948 146 0 9 chr20 2792166 2792481 -69361401 + AluSx SINE Alu 1 312 0 22 0 0 0 chr20 2792609 2792631 -69361251 + AT_rich Low_complexity Low_complexity 1 22 0 1797 144 0 38 chr20 2792676 2792989 -69360893 + AluJo SINE Alu 1 301 -11 246 167 50 33 chr20 2792993 2793053 -69360829 + MLT2D LTR ERVL 217 277 -137 189 171 0 0 chr20 2793053 2793088 -69360794 + (TA)n Simple_repeat Simple_repeat 2 36 0 342 250 17 108 chr20 2793095 2793215 -69360667 - L1MC4 LINE L1 -1339 6703 6595 323 322 20 0 chr20 2793579 2793728 -69360154 + (CCCTAA)n Simple_repeat Simple_repeat 3 154 0 271 305 23 15 chr20 2794005 2794136 -69359746 + (CCCTAA)n Simple_repeat Simple_repeat 1 132 0 598 184 68 0 chr20 2794152 2794255 -69359627 - FLAM_A SINE Alu -21 121 12 319 351 6 6 chr20 2794354 2794528 -69359354 + (CCCTAA)n Simple_repeat Simple_repeat 1 174 0 1765 145 0 63 chr20 2795389 2795783 -69358099 - AluSx SINE Alu 0 373 1 23 33 0 0 chr20 2795826 2795856 -69358026 + AT_rich Low_complexity Low_complexity 1 30 0 428 130 74 37 chr20 2796241 2796258 -69357624 - L1MB5 LINE L1 -16 6158 6047 437 121 55 0 chr20 2796258 2796349 -69357533 - L1MB4 LINE L1 -39 6141 6046 4012 182 24 35 chr20 2796438 2797373 -69356509 - L1MB5 LINE L1 -109 6065 5138 1821 134 13 59 chr20 2797373 2797679 -69356203 - AluJo SINE Alu -20 292 1 4012 182 24 35 chr20 2797679 2797730 -69356152 - L1MB5 LINE L1 -1036 5138 5088 4903 38 0 0 chr20 2797751 2798622 -69355260 - L1P2 LINE L1 -507 5647 4777 * 7543 28 5 0 chr20 2798620 2799560 -69354322 + L1P2 LINE L1 3840 4784 -1362 584 238 50 19 chr20 2799570 2799730 -69354152 + MER63A DNA MER1_type 46 210 0 1380 62 0 0 chr20 2799827 2800006 -69353876 + (TTC)n Simple_repeat Simple_repeat 2 180 0 525 169 0 23 chr20 2800006 2800136 -69353746 + CT-rich Low_complexity Low_complexity 3 129 0 1695 163 3 68 chr20 2800139 2800334 -69353548 - AluJb SINE Alu -7 305 138 2125 118 14 7 chr20 2800334 2800630 -69353252 + AluSq SINE Alu 1 298 -15 1695 163 3 68 chr20 2800630 2800760 -69353122 - AluJb SINE Alu -174 138 1 21 0 0 0 chr20 2800842 2800863 -69353019 + AT_rich Low_complexity Low_complexity 1 21 0 1142 267 29 22 chr20 2800866 2801252 -69352630 - L1ME3 LINE L1 -1 6161 5773 2384 83 3 0 chr20 2801256 2801558 -69352324 - AluY SINE Alu -8 303 1 824 200 85 0 chr20 2801741 2801906 -69351976 + AluJb SINE Alu 9 187 -125 213 352 7 55 chr20 2801942 2802024 -69351858 + L2 LINE L2 291 365 -2949 1299 195 48 72 chr20 2802024 2802115 -69351767 + MLT1B LTR MaLR 1 93 -297 2514 75 10 0 chr20 2802115 2802423 -69351459 + AluY SINE Alu 1 311 0 1299 195 48 72 chr20 2802423 2802731 -69351151 + MLT1B LTR MaLR 93 390 0 213 352 7 55 chr20 2802731 2802793 -69351089 + L2 LINE L2 365 428 -2886 1760 219 30 10 chr20 2802821 2803227 -69350655 - LTR40c LTR ERVL -13 452 39 9353 241 65 57 chr20 2803275 2805268 -69348614 - HERVL40 LTR ERVL -16 5514 3538 2042 126 61 0 chr20 2805268 2805562 -69348320 - AluSq SINE Alu -1 312 1 9353 241 65 57 chr20 2805562 2805967 -69347915 - HERVL40 LTR ERVL -1992 3538 3138 2440 93 0 10 chr20 2805967 2806278 -69347604 - AluSx SINE Alu -4 308 1 9353 241 65 57 chr20 2806278 2806687 -69347195 - HERVL40 LTR ERVL -2392 3138 2684 1895 114 7 61 chr20 2806693 2807048 -69346834 + AluSx SINE Alu 1 339 0 1535 152 45 38 chr20 2807060 2807350 -69346532 + AluJo SINE Alu 1 292 -20 925 210 58 15 chr20 2807388 2807593 -69346289 + AluJo SINE Alu 54 267 -45 2250 113 7 0 chr20 2807615 2807907 -69345975 - AluSx SINE Alu -18 294 1 2296 104 0 0 chr20 2808039 2808337 -69345545 - AluSg SINE Alu -12 298 1 624 261 68 31 chr20 2808392 2808614 -69345268 - HERVL40 LTR ERVL -3924 1606 1377 411 245 20 10 chr20 2808873 2808975 -69344907 - HERVL40 LTR ERVL -4149 1381 1279 2005 149 26 0 chr20 2808996 2809298 -69344584 + AluJb SINE Alu 1 310 -2 497 263 77 13 chr20 2809398 2809554 -69344328 - HERVL40 LTR ERVL -4448 1082 917 399 220 70 10 chr20 2809728 2809828 -69344054 - HERVL40 LTR ERVL -5424 106 1 1217 198 93 28 chr20 2809849 2810173 -69343709 - LTR40c LTR ERVL -13 452 108 842 120 0 0 chr20 2810201 2810309 -69343573 + AluSq/x SINE Alu 1 108 -204 3977 36 14 2 chr20 2810312 2810815 -69343067 + L1PA5 LINE L1 5646 6154 0 2108 112 49 3 chr20 2811117 2811404 -69342478 - AluSx SINE Alu -12 300 1 497 143 74 175 chr20 2811707 2811896 -69341986 - MER69A DNA AcHobo -7 170 1 572 139 35 26 chr20 2812071 2812186 -69341696 - AluSg/x SINE Alu -12 298 183 240 219 319 8 chr20 2812415 2812534 -69341348 - MIR SINE MIR -60 202 47 2320 91 0 3 chr20 2812558 2812856 -69341026 + AluSx SINE Alu 4 300 -12 364 208 0 0 chr20 2813080 2813152 -69340730 - AluJb SINE Alu -114 188 117 915 121 0 8 chr20 2813171 2813303 -69340579 - AluSq/x SINE Alu -182 131 1 206 244 0 0 chr20 2813344 2813385 -69340497 + (TATATG)n Simple_repeat Simple_repeat 3 43 0 1905 137 13 19 chr20 2814787 2815101 -69338781 + AluJo SINE Alu 1 312 0 244 85 43 0 chr20 2816549 2816596 -69337286 - LTR66 LTR ERVL -171 439 391 537 191 9 0 chr20 2817229 2817334 -69336548 - MER5A DNA MER1_type -80 109 4 248 239 11 67 chr20 2818476 2818656 -69335226 + C-rich Low_complexity Low_complexity 2 171 0 252 0 0 0 chr20 2818662 2818690 -69335192 + (CGG)n Simple_repeat Simple_repeat 3 30 0 206 233 44 25 chr20 2818722 2818881 -69335001 + (CGG)n Simple_repeat Simple_repeat 3 164 0 222 118 0 0 chr20 2818939 2818973 -69334909 + (CCG)n Simple_repeat Simple_repeat 1 34 0 189 0 0 0 chr20 2819031 2819052 -69334830 + (CGGG)n Simple_repeat Simple_repeat 4 24 0 25 0 0 0 chr20 2819075 2819100 -69334782 + GC_rich Low_complexity Low_complexity 1 25 0 280 216 45 23 chr20 2820822 2820910 -69332972 - L1ME4a LINE L1 -67 6054 5965 2117 141 0 0 chr20 2822047 2822369 -69331513 + AluSx SINE Alu 1 322 0 2792 33 0 0 chr20 2823121 2823427 -69330455 + AluY SINE Alu 1 306 -5 1587 214 78 13 chr20 2825813 2826200 -69327682 + LTR16C LTR ERVL 80 491 0 2101 128 21 0 chr20 2828009 2828299 -69325583 + AluJo SINE Alu 1 296 -16 1737 161 70 3 chr20 2828851 2829137 -69324745 + AluJb SINE Alu 1 305 -7 1163 142 0 0 chr20 2829146 2829301 -69324581 + FRAM SINE Alu 1 154 -22 876 190 9 3 chr20 2829309 2829531 -69324351 + AluJb SINE Alu 1 293 -19 2556 196 22 12 chr20 2829591 2830096 -69323786 - MLT1F LTR MaLR -32 510 1 477 0 0 0 chr20 2831643 2831696 -69322186 + (CA)n Simple_repeat Simple_repeat 1 53 0 543 259 86 81 chr20 2832333 2832730 -69321152 - LTR16A1 LTR ERVL -3 488 1 992 146 0 19 chr20 2834448 2834606 -69319276 + FRAM SINE Alu 18 172 -4 380 281 89 0 chr20 2834614 2834760 -69319122 + L1ME3A LINE L1 5945 6103 -67 2206 130 0 3 chr20 2834761 2835060 -69318822 + AluSx SINE Alu 1 298 -14 209 170 0 43 chr20 2835382 2835429 -69318453 + CT-rich Low_complexity Low_complexity 2 46 0 244 220 0 17 chr20 2835733 2835792 -69318090 + GA-rich Low_complexity Low_complexity 3 60 0 1798 178 0 4 chr20 2836032 2836307 -69317575 - AluJb SINE Alu -38 274 1 1173 258 79 65 chr20 2836477 2836717 -69317165 - L1MC4a LINE L1 -1633 6175 5940 1943 150 0 21 chr20 2836717 2837038 -69316844 + AluJb SINE Alu 1 315 0 1173 258 79 65 chr20 2837038 2837475 -69316407 - L1MC4a LINE L1 -1868 5940 5485 5803 253 131 25 chr20 2837477 2839960 -69313922 - L2 LINE L2 -1 3312 566 455 240 73 27 chr20 2839980 2840130 -69313752 - L1MC4a LINE L1 -2337 5471 5315 384 152 0 0 chr20 2840134 2840200 -69313682 + CT-rich Low_complexity Low_complexity 2 67 0 2063 141 10 0 chr20 2840200 2840505 -69313377 - AluJo SINE Alu 0 312 5 22 56 0 0 chr20 2840846 2840882 -69313000 + AT_rich Low_complexity Low_complexity 1 36 0 1030 276 158 14 chr20 2841089 2841600 -69312282 - L1ME2 LINE L1 -209 6024 5440 2222 106 0 0 chr20 2841600 2841906 -69311976 - AluSx SINE Alu 0 306 1 976 191 12 6 chr20 2841925 2842098 -69311784 + AluJb SINE Alu 129 302 -10 2495 70 0 7 chr20 2842103 2842404 -69311478 + AluSp SINE Alu 2 300 -13 4010 270 67 59 chr20 2842420 2843668 -69310214 - L1ME2 LINE L1 -1074 5141 3904 2499 87 0 0 chr20 2843668 2843966 -69309916 - AluSg SINE Alu -12 298 1 4010 270 67 59 chr20 2843966 2844943 -69308939 - L1ME2 LINE L1 -2311 3904 2889 1978 169 0 0 chr20 2844943 2845117 -69308765 - AluJb SINE Alu -5 307 131 2284 112 6 10 chr20 2845117 2845430 -69308452 - AluSx SINE Alu 0 312 1 1978 169 0 0 chr20 2845430 2845562 -69308320 - AluJb SINE Alu -180 132 1 4010 270 67 59 chr20 2845562 2845983 -69307899 - L1ME2 LINE L1 -3326 2889 2473 1802 83 9 4 chr20 2846024 2846253 -69307629 - AluSq SINE Alu -83 230 1 2752 257 132 17 chr20 2846259 2847318 -69306564 - L1ME2 LINE L1 -4205 2191 939 2388 95 0 0 chr20 2847318 2847612 -69306270 - AluSx SINE Alu -18 294 1 2752 257 132 17 chr20 2847612 2847914 -69305968 - L1ME2 LINE L1 -5457 939 673 716 178 0 15 chr20 2847915 2848050 -69305832 - FLAM_A SINE Alu -2 140 8 2139 269 52 16 chr20 2848055 2848629 -69305253 - L1ME2 LINE L1 -5709 687 87 189 0 0 0 chr20 2848629 2848650 -69305232 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 2139 269 52 16 chr20 2848650 2848703 -69305179 - L1ME2 LINE L1 -6309 87 37 254 233 14 0 chr20 2848697 2848770 -69305112 - L1MEd LINE L1 -3267 2862 2789 * 430 285 88 45 chr20 2848778 2849196 -69304686 - L1MEd LINE L1 -3475 2654 2209 2723 35 3 0 chr20 2849196 2849506 -69304376 - AluY SINE Alu 0 311 1 430 285 88 45 chr20 2849506 2849600 -69304282 - L1MEd LINE L1 -3920 2209 2120 227 194 42 0 chr20 2849602 2849674 -69304208 - L1MA9 LINE L1 0 6312 6238 373 288 42 102 chr20 2849680 2849916 -69303966 - L1MEd LINE L1 -4170 2140 1919 781 240 43 34 chr20 2849924 2850132 -69303750 - MER63A DNA MER1_type 0 210 1 24 32 0 0 chr20 2850191 2850222 -69303660 + AT_rich Low_complexity Low_complexity 1 31 0 1100 277 64 48 chr20 2850278 2850481 -69303401 - L1MEd LINE L1 -4652 1658 1460 1917 172 3 0 chr20 2850481 2850778 -69303104 + AluJo SINE Alu 2 299 -13 1100 277 64 48 chr20 2850778 2851608 -69302274 - L1MEd LINE L1 -4850 1460 557 343 358 33 33 chr20 2851877 2852092 -69301790 - L1M4 LINE L1 -1146 5000 4786 387 136 0 0 chr20 2852112 2852171 -69301711 + AluJ/FLAM SINE Alu 1 59 -243 1371 217 4 14 chr20 2852176 2852453 -69301429 + AluJo SINE Alu 24 297 -15 4131 146 50 80 chr20 2852627 2853195 -69300687 - L1MB2 LINE L1 0 6171 5645 1084 187 20 49 chr20 2853195 2853441 -69300441 + MER8 DNA MER2_type 1 239 0 4131 146 50 80 chr20 2853441 2853899 -69299983 - L1MB2 LINE L1 -526 5645 5175 1288 200 118 52 chr20 2854601 2855066 -69298816 + Charlie4a DNA MER1_type 13 508 0 424 232 216 48 chr20 2855666 2855916 -69297966 - LTR16A1 LTR ERVL -16 441 150 1244 234 106 14 chr20 2855982 2856405 -69297477 - MLT1C LTR MaLR 0 467 6 2337 110 0 0 chr20 2856753 2857054 -69296828 - AluSc SINE Alu -8 301 1 321 228 179 14 chr20 2857076 2857221 -69296661 - MLT1J2 LTR MaLR 0 450 282 385 254 29 29 chr20 2857361 2857499 -69296383 - MLT1J LTR MaLR -369 142 5 1530 195 48 65 chr20 2857840 2857959 -69295923 - L1M4 LINE L1 -3565 3079 2959 1745 167 0 63 chr20 2857959 2858277 -69295605 - AluJb SINE Alu -12 300 3 1530 195 48 65 chr20 2858277 2858690 -69295192 - L1M4 LINE L1 -3685 2959 2596 261 182 18 18 chr20 2858688 2858743 -69295139 - L1MC1 LINE L1 -49 6284 6230 * 6419 211 29 53 chr20 2858733 2859575 -69294307 - L1M4 LINE L1 -4478 2168 1308 1266 108 80 0 chr20 2859575 2859788 -69294094 + MER30 DNA MER1_type 1 230 0 6419 211 29 53 chr20 2859788 2859984 -69293898 - L1M4 LINE L1 -5338 1308 1109 1973 152 3 3 chr20 2859984 2860274 -69293608 + AluJb SINE Alu 2 291 -21 6419 211 29 53 chr20 2860274 2861433 -69292449 - L1M4 LINE L1 -5537 1109 16 180 254 16 32 chr20 2861489 2861552 -69292330 - L3 LINE CR1 -780 797 736 261 318 47 0 chr20 2861561 2861668 -69292214 - L2 LINE L2 -27 3245 3134 731 202 101 5 chr20 2861793 2861981 -69291901 + MER3 DNA MER1_type 4 209 0 2677 45 0 6 chr20 2862825 2863136 -69290746 + AluY SINE Alu 1 309 -2 275 279 42 85 chr20 2863297 2863462 -69290420 + MIR SINE MIR 77 234 -28 2176 103 24 3 chr20 2863546 2863838 -69290044 + AluSx SINE Alu 1 298 -14 207 255 20 0 chr20 2865416 2865467 -69288415 + L2 LINE L2 3262 3313 0 754 160 0 89 chr20 2865824 2865888 -69287994 - MER3 DNA MER1_type 0 209 141 2359 92 0 0 chr20 2865888 2866180 -69287702 + AluSx SINE Alu 1 292 -20 754 160 0 89 chr20 2866180 2866284 -69287598 - MER3 DNA MER1_type -68 141 56 973 170 251 12 chr20 2866498 2866821 -69287061 - LTR16A1 LTR ERVL -2 455 56 1956 150 3 7 chr20 2866886 2867179 -69286703 + AluJb SINE Alu 1 292 -20 214 294 78 20 chr20 2868030 2868132 -69285750 + MIR SINE MIR 45 152 -56 195 250 0 0 chr20 2869006 2869050 -69284832 + L2 LINE L2 3044 3087 -185 606 212 16 171 chr20 2869288 2869609 -69284273 - LTR37B LTR ERV1 0 468 198 286 227 147 0 chr20 2869669 2869744 -69284138 - L1MA4A LINE L1 -28 6275 6190 657 167 39 78 chr20 2869749 2869925 -69283957 - L1MA4A LINE L1 -181 6122 5954 1549 74 0 0 chr20 2869925 2870114 -69283768 - AluSq SINE Alu 0 313 125 657 167 39 78 chr20 2870114 2870141 -69283741 - L1MA4A LINE L1 -349 5954 5927 242 133 173 40 chr20 2870171 2870246 -69283636 - LTR37B LTR ERV1 -270 198 114 2082 164 0 0 chr20 2870337 2870649 -69283233 - AluSx SINE Alu 0 312 1 1391 158 75 7 chr20 2870650 2870929 -69282953 - MER33 DNA MER1_type -26 298 1 625 207 124 0 chr20 2870937 2871082 -69282800 - MER5A DNA MER1_type 0 189 27 1785 111 51 63 chr20 2872868 2873184 -69280698 + AluSx SINE Alu 1 312 0 24 32 0 0 chr20 2875383 2875414 -69278468 + GC_rich Low_complexity Low_complexity 1 31 0 180 111 0 0 chr20 2876880 2876907 -69276975 + (GGAGAA)n Simple_repeat Simple_repeat 6 32 0 188 194 129 32 chr20 2877298 2877360 -69276522 + L2 LINE L2 3245 3312 -1 180 0 0 0 chr20 2877655 2877675 -69276207 + (CGGGG)n Simple_repeat Simple_repeat 5 24 0 27 81 0 0 chr20 2877867 2877929 -69275953 + GC_rich Low_complexity Low_complexity 1 62 0 24 103 0 0 chr20 2878103 2878190 -69275692 + GC_rich Low_complexity Low_complexity 1 87 0 185 314 0 0 chr20 2879315 2879366 -69274516 - L2 LINE L2 -8 3264 3214 186 195 13 143 chr20 2882104 2882181 -69271701 - MIR3 SINE MIR -28 180 114 184 266 0 78 chr20 2882461 2882525 -69271357 + L2 LINE L2 3255 3313 0 279 256 156 0 chr20 2882697 2882787 -69271095 + MER103 DNA DNA 61 164 -2 983 204 107 89 chr20 2883498 2883522 -69270360 - LTR37B LTR ERV1 -15 453 431 1863 151 0 31 chr20 2883522 2883838 -69270044 + AluJb SINE Alu 1 307 0 983 204 107 89 chr20 2883838 2884251 -69269631 - LTR37B LTR ERV1 -37 431 6 1506 212 35 32 chr20 2887196 2887569 -69266313 + MLT1A2 LTR MaLR 1 374 0 1494 263 26 35 chr20 2888335 2888799 -69265083 - LTR16C LTR ERVL 0 491 32 628 112 10 10 chr20 2889425 2889523 -69264359 + FLAM_A SINE Alu 31 128 -14 526 240 16 0 chr20 2889523 2889648 -69264234 + L1M4 LINE L1 4912 5038 -1108 270 0 0 0 chr20 2890158 2890188 -69263694 + (TG)n Simple_repeat Simple_repeat 2 31 0 1575 122 110 28 chr20 2890188 2890442 -69263440 - AluJo SINE Alu -34 278 4 2111 131 10 13 chr20 2890468 2890781 -69263101 - AluJb SINE Alu 0 312 1 2080 107 28 31 chr20 2890934 2891223 -69262659 + AluSx SINE Alu 2 289 -23 28 29 0 0 chr20 2891230 2891265 -69262617 + AT_rich Low_complexity Low_complexity 1 35 0 1116 254 43 15 chr20 2891265 2891659 -69262223 - L1M4 LINE L1 -1056 5090 4686 875 175 0 0 chr20 2891659 2891802 -69262080 - FLAM_C SINE Alu 0 143 1 2007 242 104 19 chr20 2891804 2891901 -69261981 - L1M4 LINE L1 -1433 4713 4626 1727 134 4 4 chr20 2891901 2892154 -69261728 + AluSx SINE Alu 51 303 -9 2007 242 104 19 chr20 2892154 2892875 -69261007 - L1M4 LINE L1 -1520 4626 3826 1863 120 4 0 chr20 2892936 2893186 -69260696 - AluSx SINE Alu -61 251 1 2047 137 10 3 chr20 2894809 2895102 -69258780 - AluJo SINE Alu -17 295 1 973 252 114 26 chr20 2895139 2895559 -69258323 - LTR16A1 LTR ERVL 0 457 1 2229 88 0 7 chr20 2896095 2896425 -69257457 + AluSx SINE Alu 1 328 0 2658 219 91 87 chr20 2896736 2896823 -69257059 + L1MD2 LINE L1 5 90 -6450 1680 140 63 14 chr20 2896823 2897109 -69256773 + AluJo SINE Alu 11 310 -2 2658 219 91 87 chr20 2897109 2898028 -69255854 + L1MD2 LINE L1 90 1015 -5525 1122 129 0 35 chr20 2898041 2898211 -69255671 - FRAM SINE Alu -15 161 1 1902 200 45 42 chr20 2898211 2898272 -69255610 + L1MD2 LINE L1 1000 1059 -5481 2503 70 3 0 chr20 2898272 2898571 -69255311 + AluSp SINE Alu 1 300 -13 1902 200 45 42 chr20 2898571 2899061 -69254821 + L1MD2 LINE L1 1059 1556 -4984 1990 181 3 0 chr20 2899061 2899370 -69254512 + AluJb SINE Alu 1 310 -2 1902 200 45 42 chr20 2899370 2899411 -69254471 + L1MD2 LINE L1 1556 1595 -4945 2377 95 7 0 chr20 2899481 2899786 -69254096 - AluSc SINE Alu -2 307 1 1956 164 7 0 chr20 2899790 2900089 -69253793 - AluJo SINE Alu -11 301 1 1734 129 126 0 chr20 2900323 2900609 -69253273 - AluSx SINE Alu 0 318 1 241 220 40 0 chr20 2900740 2900790 -69253092 - MER91 DNA MER1_type -12 178 127 1703 309 40 6 chr20 2900870 2901375 -69252507 - HERV16 LTR ERVL -1925 3071 2550 1628 230 25 77 chr20 2901387 2901872 -69252010 + L1MD2 LINE L1 4250 4759 -1781 1775 167 10 10 chr20 2901872 2902172 -69251710 + AluJo SINE Alu 1 300 -12 1628 230 25 77 chr20 2902172 2902292 -69251590 + L1MD2 LINE L1 4759 4884 -1656 1775 171 42 36 chr20 2902292 2902512 -69251370 - MLT1B LTR MaLR 0 390 166 2223 109 7 0 chr20 2902512 2902806 -69251076 - AluSx SINE Alu -11 301 6 1775 171 42 36 chr20 2902806 2902971 -69250911 - MLT1B LTR MaLR -224 166 3 1628 230 25 77 chr20 2902971 2903140 -69250742 + L1MD2 LINE L1 4884 4928 -1612 2176 109 7 0 chr20 2903140 2903455 -69250427 - AluSg SINE Alu 0 317 1 1628 230 25 77 chr20 2903455 2903640 -69250242 + L1MD2 LINE L1 4928 5121 -1419 2366 109 0 0 chr20 2903679 2903981 -69249901 - AluSx SINE Alu -10 302 1 4683 159 28 57 chr20 2903991 2904036 -69249846 - L1MB4 LINE L1 -2 6178 6133 701 200 0 15 chr20 2904036 2904171 -69249711 - FLAM_A SINE Alu 0 133 1 4683 159 28 57 chr20 2904171 2904811 -69249071 - L1MB4 LINE L1 -47 6133 5476 2119 140 7 0 chr20 2904811 2905119 -69248763 - AluSx SINE Alu -2 310 1 4683 159 28 57 chr20 2905119 2905298 -69248584 - L1MB4 LINE L1 -704 5476 5293 2432 35 35 7 chr20 2905298 2905585 -69248297 + AluY SINE Alu 1 295 -16 4683 159 28 57 chr20 2905585 2905985 -69247897 - L1MB4 LINE L1 -887 5293 4924 1860 212 32 4 chr20 2905971 2906438 -69247444 + L1MD2 LINE L1 5113 5592 -948 * 3651 188 61 42 chr20 2907095 2908089 -69245793 + L1MD2 LINE L1 5583 6545 -208 237 292 0 0 chr20 2908138 2908203 -69245679 + L1MD3 LINE L1 7798 7862 -133 1214 129 40 49 chr20 2908206 2908280 -69245602 - MLT1B LTR MaLR 0 390 317 2205 125 0 0 chr20 2908280 2908575 -69245307 + AluSx SINE Alu 2 296 -16 1214 129 40 49 chr20 2908575 2908725 -69245157 - MLT1B LTR MaLR -73 317 168 707 185 37 0 chr20 2908726 2908861 -69245021 - FLAM_C SINE Alu -2 141 2 852 148 56 0 chr20 2908861 2909023 -69244859 - MLT1B LTR MaLR -216 174 4 411 207 86 9 chr20 2909024 2909140 -69244742 + L1MD2 LINE L1 6616 6740 -13 2177 121 14 3 chr20 2909140 2909437 -69244445 + AluSx SINE Alu 1 300 -12 2528 70 3 0 chr20 2909439 2909739 -69244143 + AluSp SINE Alu 3 303 -10 2433 210 85 2 chr20 2909740 2910330 -69243552 + L1ME1 LINE L1 5312 5950 -216 869 233 65 71 chr20 2910325 2910451 -69243431 - L1M4c LINE L1 -3921 2463 2338 * 2272 125 0 0 chr20 2910451 2910762 -69243120 - AluJb SINE Alu -1 311 1 869 233 65 71 chr20 2910762 2910823 -69243059 - L1M4c LINE L1 -4046 2338 2278 2413 68 0 0 chr20 2910823 2911143 -69242739 - AluSc SINE Alu 0 320 1 869 233 65 71 chr20 2911143 2911519 -69242363 - L1M4c LINE L1 -4106 2278 2025 486 151 41 27 chr20 2911530 2911676 -69242206 - L1MB8 LINE L1 0 6178 6031 601 226 0 0 chr20 2911686 2911801 -69242081 + AluJo SINE Alu 1 115 -187 931 129 57 0 chr20 2911801 2911941 -69241941 + AluJo SINE Alu 162 309 -3 922 175 5 47 chr20 2911949 2912160 -69241722 - L1MB5 LINE L1 -154 6020 5819 2203 133 0 16 chr20 2912161 2912477 -69241405 - AluSx SINE Alu -1 311 1 1164 197 21 45 chr20 2912477 2912766 -69241116 - L1M4c LINE L1 -4728 1656 1375 571 209 67 52 chr20 2912766 2912870 -69241012 + L1ME1 LINE L1 5936 6037 -129 2416 78 0 0 chr20 2912870 2913166 -69240716 - AluY SINE Alu -15 296 1 571 209 67 52 chr20 2913166 2913271 -69240611 + L1ME1 LINE L1 6037 6148 -18 1976 91 65 18 chr20 2913301 2913577 -69240305 - AluSc SINE Alu -20 289 1 1902 133 16 42 chr20 2913632 2913940 -69239942 - AluSp SINE Alu -12 301 2 574 262 47 92 chr20 2913956 2914111 -69239771 - L1ME3A LINE L1 -80 6090 5930 1783 182 0 19 chr20 2914111 2914429 -69239453 - AluJo SINE Alu 0 312 1 574 262 47 92 chr20 2914429 2914615 -69239267 - L1ME3A LINE L1 -240 5930 5773 1843 173 7 10 chr20 2914615 2914922 -69238960 - AluJb SINE Alu -6 306 1 574 262 47 92 chr20 2914922 2915048 -69238834 - L1ME3A LINE L1 -397 5773 5643 246 211 32 32 chr20 2915476 2915571 -69238311 - L1ME3A LINE L1 -914 5386 5292 * 519 279 50 84 chr20 2915560 2915659 -69238223 - L1MEd LINE L1 -4862 1257 1156 2024 157 0 13 chr20 2915659 2915964 -69237918 + AluJb SINE Alu 1 301 -11 519 279 50 84 chr20 2915964 2915979 -69237903 - L1MEd LINE L1 -4963 1156 1142 1888 137 42 0 chr20 2915979 2916264 -69237618 + AluJo SINE Alu 9 305 -7 519 279 50 84 chr20 2916264 2916516 -69237366 - L1MEd LINE L1 -4977 1142 883 183 114 0 0 chr20 2916516 2916551 -69237331 + (TA)n Simple_repeat Simple_repeat 1 35 0 1884 107 95 4 chr20 2916551 2916814 -69237068 - AluSx SINE Alu -25 287 1 519 279 50 84 chr20 2916814 2916979 -69236903 - L1MEd LINE L1 -5234 885 741 1997 102 65 0 chr20 2917217 2917492 -69236390 + AluSx SINE Alu 1 293 -19 180 0 0 0 chr20 2917492 2917512 -69236370 + (GGAA)n Simple_repeat Simple_repeat 3 22 0 476 232 21 49 chr20 2917920 2918062 -69235820 + LTR67 LTR ERVL 410 547 -10 769 244 34 21 chr20 2918141 2918375 -69235507 + L1ME3A LINE L1 5934 6170 0 313 291 30 61 chr20 2918574 2918739 -69235143 + LTR33A LTR ERVL 1 160 -363 1421 135 54 58 chr20 2918932 2919192 -69234690 - AluJb SINE Alu -53 259 1 365 235 20 10 chr20 2919197 2919299 -69234583 + LTR33A LTR ERVL 421 523 0 221 321 55 41 chr20 2925053 2925271 -69228611 + L2 LINE L2 2909 3129 -143 439 257 0 11 chr20 2925930 2926109 -69227773 + (TG)n Simple_repeat Simple_repeat 1 177 0 224 265 0 15 chr20 2926110 2926178 -69227704 + (CGTG)n Simple_repeat Simple_repeat 1 67 0 2364 157 105 0 chr20 2926733 2927192 -69226690 + MER84 LTR ERV1 1 507 0 2445 110 44 10 chr20 2927192 2927582 -69226300 + MER84-int LTR ERV1 1 403 -4551 906 141 17 57 chr20 2927554 2927731 -69226151 + MER84-int LTR ERV1 598 767 -4187 * 557 153 207 0 chr20 2927732 2927843 -69226039 + AluSp SINE Alu 2 135 -178 2063 107 0 61 chr20 2927843 2928171 -69225711 + AluSx SINE Alu 1 308 -4 6033 116 15 31 chr20 2928177 2929075 -69224807 + MER84-int LTR ERV1 755 1638 -3316 2101 106 29 0 chr20 2929075 2929376 -69224506 + AluSp SINE Alu 1 309 0 6033 116 15 31 chr20 2929376 2929467 -69224415 + MER84-int LTR ERV1 1638 1729 -3225 1099 138 6 29 chr20 2929470 2929644 -69224238 + AluSx SINE Alu 1 170 -142 2430 79 50 6 chr20 2929647 2929989 -69223893 + MER84-int LTR ERV1 4598 4954 0 2221 139 153 14 chr20 2929989 2930434 -69223448 + MER84 LTR ERV1 1 507 0 247 261 15 0 chr20 2930536 2930601 -69223281 - MIR SINE MIR -62 146 81 210 178 0 22 chr20 2930845 2930890 -69222992 + CT-rich Low_complexity Low_complexity 5 48 0 422 293 137 32 chr20 2931991 2932428 -69221454 + L2 LINE L2 2827 3309 -4 2427 88 3 0 chr20 2932605 2932911 -69220971 - AluY SINE Alu -4 307 1 448 262 54 30 chr20 2933371 2933539 -69220343 + MIR SINE MIR 29 200 -62 385 173 83 149 chr20 2933909 2933979 -69219903 + MER5A DNA MER1_type 4 77 -112 2199 91 9 61 chr20 2933979 2934308 -69219574 + AluSx SINE Alu 1 312 0 385 173 83 149 chr20 2934308 2934368 -69219514 + MER5A DNA MER1_type 77 123 -66 1792 95 13 0 chr20 2934368 2934600 -69219282 - AluSg/x SINE Alu -9 301 67 385 173 83 149 chr20 2934600 2934636 -69219246 + MER5A DNA MER1_type 123 160 -29 1020 171 40 72 chr20 2934865 2934910 -69218972 - AluJo SINE Alu -11 301 256 4467 54 3 17 chr20 2934910 2935245 -69218637 - LTR14C LTR ERVK 0 587 262 2508 59 0 7 chr20 2935245 2935551 -69218331 + AluY SINE Alu 1 304 -7 4467 54 3 17 chr20 2935551 2935810 -69218072 - LTR14C LTR ERVK -325 262 1 1020 171 40 72 chr20 2935810 2935937 -69217945 - AluJo SINE Alu -56 256 135 2426 84 3 7 chr20 2935937 2936246 -69217636 - AluSc SINE Alu -1 308 1 1020 171 40 72 chr20 2936246 2936294 -69217588 - AluJo SINE Alu -177 135 87 3529 120 22 25 chr20 2936309 2936535 -69217347 - L1PB3 LINE L1 -2 6152 5927 2439 74 7 7 chr20 2936535 2936845 -69217037 - AluY SINE Alu -1 310 1 3529 120 22 25 chr20 2936845 2936978 -69216904 - L1PB3 LINE L1 -227 5927 5795 369 0 0 0 chr20 2936978 2937019 -69216863 + (TG)n Simple_repeat Simple_repeat 1 41 0 3529 120 22 25 chr20 2937019 2937251 -69216631 - L1PB3 LINE L1 -359 5795 5562 2148 253 125 38 chr20 2937310 2937414 -69216468 - HAL1 LINE L1 -100 2407 2313 1960 155 16 7 chr20 2937414 2937718 -69216164 - AluSq SINE Alu 0 313 7 2148 253 125 38 chr20 2937718 2938661 -69215221 - HAL1 LINE L1 -194 2313 1269 2557 89 0 0 chr20 2938662 2938975 -69214907 + AluSq SINE Alu 1 313 0 404 183 0 0 chr20 2938980 2939051 -69214831 + LTR16A1 LTR ERVL 372 442 -15 1917 132 146 13 chr20 2939062 2939440 -69214442 + MSTA LTR MaLR 1 428 0 291 203 0 58 chr20 2939440 2939509 -69214373 + L2 LINE L2 3207 3271 -1 196 308 208 8 chr20 2943568 2943698 -69210184 + MIR SINE MIR 57 212 -50 310 330 0 9 chr20 2944551 2944657 -69209225 + MIR SINE MIR 48 152 -110 542 253 108 0 chr20 2945332 2945434 -69208448 + MER5A DNA MER1_type 9 135 -54 2339 104 7 0 chr20 2945434 2945733 -69208149 - AluSx SINE Alu -11 301 1 542 253 108 0 chr20 2945733 2945788 -69208094 + MER5A DNA MER1_type 135 183 -6 1250 43 10 34 chr20 2948287 2948494 -69205388 + SVA Other Other 665 866 -520 6637 79 13 47 chr20 2948518 2949717 -69204165 + SVA Other Other 431 1386 0 646 289 36 27 chr20 2949942 2950243 -69203639 - L1M4 LINE L1 -1993 4153 3850 * 936 234 98 8 chr20 2950212 2950273 -69203609 - L1MC2 LINE L1 -344 5818 5764 1833 160 0 45 chr20 2950273 2950585 -69203297 - AluSx SINE Alu -14 298 1 936 234 98 8 chr20 2950585 2950849 -69203033 - L1MC2 LINE L1 -398 5764 5547 5883 217 38 33 chr20 2951031 2951955 -69201927 + L1PA8 LINE L1 3811 4729 -1443 2387 92 0 16 chr20 2951955 2952259 -69201623 + AluSq SINE Alu 1 299 -14 5883 217 38 33 chr20 2952259 2953703 -69200179 + L1PA8 LINE L1 4729 6172 0 354 274 102 80 chr20 2953691 2953965 -69199917 + L1ME1 LINE L1 5885 6164 -2 * 1555 183 3 74 chr20 2953967 2954290 -69199592 - AluJo SINE Alu -12 300 1 2249 80 3 14 chr20 2954296 2954612 -69199270 - AluY SINE Alu 0 313 1 2200 119 0 0 chr20 2954788 2955107 -69198775 - AluSq SINE Alu 0 319 1 1303 126 0 88 chr20 2955110 2955349 -69198533 - AluSg/x SINE Alu -10 302 85 749 179 14 7 chr20 2955351 2955468 -69198414 - AluSg/x SINE Alu -59 253 133 1997 120 62 3 chr20 2955468 2955760 -69198122 - AluSq SINE Alu -4 309 1 749 179 14 7 chr20 2955760 2955782 -69198100 - AluSg/x SINE Alu -179 133 113 2524 69 3 3 chr20 2956275 2956580 -69197302 - AluY SINE Alu -6 305 1 1626 173 14 21 chr20 2956768 2957052 -69196830 + AluJb SINE Alu 1 282 -30 359 281 37 55 chr20 2957082 2957246 -69196636 + L1MCa LINE L1 1938 2098 -4328 652 222 0 28 chr20 2957627 2957771 -69196111 + FLAM_C SINE Alu 2 141 -2 1971 108 79 0 chr20 2958550 2958827 -69195055 + AluSc SINE Alu 1 299 -10 219 235 39 0 chr20 2958868 2958919 -69194963 - L2 LINE L2 -5 3267 3215 210 364 10 10 chr20 2960090 2960189 -69193693 + G-rich Low_complexity Low_complexity 3 101 0 198 183 83 83 chr20 2961327 2961387 -69192495 - L2 LINE L2 -7 3306 3247 181 362 121 17 chr20 2965285 2965459 -69188423 + L2 LINE L2 2693 2884 -430 2047 120 21 3 chr20 2965722 2966013 -69187869 - AluSx SINE Alu -16 296 1 795 196 18 0 chr20 2966114 2966282 -69187600 + FAM SINE Alu 1 171 -4 2031 125 33 0 chr20 2966292 2966564 -69187318 + AluSx SINE Alu 1 281 -31 345 326 0 0 chr20 2966580 2966669 -69187213 + L1MC4 LINE L1 6614 6702 -1340 314 346 0 9 chr20 2966603 2966710 -69187172 - L1MC4 LINE L1 -1323 6719 6614 * 294 231 0 0 chr20 2966720 2966863 -69187019 + (TAGA)n Simple_repeat Simple_repeat 4 146 0 2447 102 0 0 chr20 2967110 2967415 -69186467 + AluSg SINE Alu 1 305 -5 764 222 111 34 chr20 2967862 2968069 -69185813 - MIR SINE MIR -8 254 32 492 335 119 36 chr20 2968640 2968966 -69184916 - L2 LINE L2 -216 3056 2759 324 0 0 0 chr20 2968966 2969002 -69184880 + (TG)n Simple_repeat Simple_repeat 2 37 0 492 335 119 36 chr20 2969002 2969352 -69184530 - L2 LINE L2 -513 2759 2315 321 217 0 0 chr20 2969489 2969556 -69184326 + FRAM/FAM SINE Alu 1 49 -117 3323 136 45 41 chr20 2969569 2970071 -69183811 - L1MB2 LINE L1 -7 6164 5657 2541 82 0 0 chr20 2970071 2970375 -69183507 - AluSx SINE Alu -8 304 1 3323 136 45 41 chr20 2970375 2970512 -69183370 - L1MB2 LINE L1 -514 5657 5522 229 367 64 56 chr20 2971302 2971440 -69182442 + L2 LINE L2 719 854 -2460 2411 95 0 0 chr20 2971440 2971735 -69182147 - AluSc SINE Alu -14 295 1 229 367 64 56 chr20 2971735 2972171 -69181711 + L2 LINE L2 854 1298 -2016 960 190 0 46 chr20 2972189 2972384 -69181498 - AluJb SINE Alu -1 311 126 1715 290 78 6 chr20 2972389 2972927 -69180955 - ERVL LTR ERVL -926 4838 4262 557 342 56 8 chr20 2972989 2973255 -69180627 - ERVL LTR ERVL -5042 722 444 2235 120 7 0 chr20 2973256 2973555 -69180327 - AluSp SINE Alu -10 303 3 257 226 215 57 chr20 2973938 2973998 -69179884 - LTR41 LTR ERVL 0 795 746 2172 117 0 7 chr20 2973998 2974305 -69179577 + AluSq SINE Alu 1 305 -8 2291 124 3 0 chr20 2974305 2974612 -69179270 + AluSc SINE Alu 1 308 -1 257 226 215 57 chr20 2974612 2974644 -69179238 - LTR41 LTR ERVL -49 746 720 1832 156 23 16 chr20 2974644 2974951 -69178931 + AluJb SINE Alu 1 309 -3 257 226 215 57 chr20 2974951 2975100 -69178782 - LTR41 LTR ERVL -75 720 510 1044 94 0 0 chr20 2975285 2975413 -69178469 + AluSp SINE Alu 1 128 -185 1806 88 4 0 chr20 2975414 2975640 -69178242 + AluSq SINE Alu 76 302 -11 2322 76 3 7 chr20 2975646 2975934 -69177948 + AluY SINE Alu 1 287 -24 745 177 37 18 chr20 2976216 2976380 -69177502 - LTR41 LTR ERVL -604 169 3 13676 110 40 41 chr20 2976500 2977067 -69176815 - Tigger1 DNA MER2_type 0 2418 1852 2229 129 7 0 chr20 2977067 2977377 -69176505 + AluSx SINE Alu 1 312 0 13676 110 40 41 chr20 2977377 2977623 -69176259 - Tigger1 DNA MER2_type -566 1852 1607 2427 104 0 0 chr20 2977623 2977931 -69175951 - AluSx SINE Alu -4 308 1 13676 110 40 41 chr20 2977931 2978085 -69175797 - Tigger1 DNA MER2_type -811 1607 1454 1356 189 47 47 chr20 2978085 2978197 -69175685 + AluJo SINE Alu 1 112 -200 243 0 0 0 chr20 2978197 2978224 -69175658 + (CA)n Simple_repeat Simple_repeat 2 28 0 1356 189 47 47 chr20 2978224 2978440 -69175442 + AluJo SINE Alu 111 312 0 13676 110 40 41 chr20 2978440 2978470 -69175412 - Tigger1 DNA MER2_type -964 1454 1425 2401 112 0 6 chr20 2978470 2978784 -69175098 + AluSx SINE Alu 1 312 0 13676 110 40 41 chr20 2978784 2978919 -69174963 - Tigger1 DNA MER2_type -993 1425 1291 2356 98 3 0 chr20 2978919 2979216 -69174666 - AluSg SINE Alu -12 298 1 13676 110 40 41 chr20 2979216 2980499 -69173383 - Tigger1 DNA MER2_type -1127 1291 1 327 287 97 100 chr20 2980715 2980924 -69172958 - L1M4 LINE L1 -1290 4856 4647 2371 106 3 0 chr20 2980924 2981235 -69172647 - AluSx SINE Alu 0 312 1 327 287 97 100 chr20 2981235 2981426 -69172456 - L1M4 LINE L1 -1499 4647 4457 1305 103 0 17 chr20 2981461 2981635 -69172247 - AluSg/x SINE Alu -8 304 134 1840 134 4 15 chr20 2981635 2981933 -69171949 - AluSq SINE Alu 0 313 36 266 261 77 70 chr20 2981976 2982059 -69171823 - L1P LINE L1 -1809 4337 4256 1857 152 0 40 chr20 2982059 2982355 -69171527 - AluJb SINE Alu -18 294 11 266 261 77 70 chr20 2982355 2982517 -69171365 - L1P LINE L1 -1890 4256 4089 1651 197 33 0 chr20 2982975 2983275 -69170607 + AluJo SINE Alu 1 310 -2 203 220 68 0 chr20 2983773 2983832 -69170050 + L2 LINE L2 64 126 -3188 2370 98 3 0 chr20 2987440 2987736 -69166146 + AluSx SINE Alu 2 298 -14 241 169 34 0 chr20 2987763 2987822 -69166060 + GA-rich Low_complexity Low_complexity 4 64 0 338 236 185 38 chr20 2990971 2991128 -69162754 - MIR SINE MIR -37 225 46 878 236 152 26 chr20 2991823 2992225 -69161657 - MLT1G3 LTR MaLR -51 539 16 697 136 7 102 chr20 2992228 2992375 -69161507 - FLAM_C SINE Alu 0 133 1 270 0 0 0 chr20 2992531 2992561 -69161321 + (T)n Simple_repeat Simple_repeat 1 30 0 294 241 60 65 chr20 2992996 2993212 -69160670 - L1MC4 LINE L1 -2 8040 7826 322 225 25 0 chr20 2993254 2993334 -69160548 - L1ME2 LINE L1 -10 6154 6073 2146 88 10 34 chr20 2993596 2993891 -69159991 + AluSq SINE Alu 1 288 -25 2505 70 3 3 chr20 2993999 2994301 -69159581 + AluSq SINE Alu 1 302 -11 404 273 148 34 chr20 2994338 2994547 -69159335 + L2 LINE L2 3079 3311 -2 202 196 20 15 chr20 2994548 2994615 -69159267 - MIR SINE MIR -68 140 84 195 152 0 0 chr20 2997076 2997109 -69156773 + MIR SINE MIR 117 149 -113 22 0 0 0 chr20 2997296 2997318 -69156564 + GC_rich Low_complexity Low_complexity 1 22 0 36 40 0 0 chr20 2997533 2997583 -69156299 + GC_rich Low_complexity Low_complexity 1 50 0 22 35 0 0 chr20 2998250 2998279 -69155603 + AT_rich Low_complexity Low_complexity 1 29 0 198 314 26 84 chr20 2998601 2998792 -69155090 + L2 LINE L2 2695 2874 -440 191 296 163 10 chr20 2999399 2999497 -69154385 - L2 LINE L2 -17 3255 3143 195 305 203 0 chr20 2999542 2999670 -69154212 - MIR SINE MIR 0 262 109 254 314 91 54 chr20 2999741 2999983 -69153899 - L2 LINE L2 -193 3079 2829 441 265 134 87 chr20 3000370 3000721 -69153161 - L1MC4a LINE L1 -273 5889 5527 218 298 36 36 chr20 3000815 3000899 -69152983 - MIR3 SINE MIR -36 172 89 2137 106 7 0 chr20 3001155 3001469 -69152413 - AluSp SINE Alu 0 318 3 2534 70 0 0 chr20 3001783 3002081 -69151801 + AluSc SINE Alu 1 298 -11 1955 131 20 16 chr20 3002116 3002422 -69151460 - AluJb SINE Alu -5 307 1 259 265 211 31 chr20 3002439 3002662 -69151220 - L1ME LINE L1 -356 5765 5503 280 392 21 0 chr20 3002923 3003020 -69150862 - L2 LINE L2 -40 3232 3134 556 239 148 7 chr20 3003164 3003319 -69150563 - MER5A DNA MER1_type 0 189 13 712 203 16 60 chr20 3003409 3003535 -69150347 - MER5B DNA MER1_type -1 177 60 2060 168 24 0 chr20 3003535 3003875 -69150007 + MER7A DNA MER2_type 1 346 0 712 203 16 60 chr20 3003875 3003930 -69149952 - MER5B DNA MER1_type -118 60 4 384 261 50 37 chr20 3003947 3004108 -69149774 - L2 LINE L2 -473 2841 2679 2595 220 132 81 chr20 3004133 3004657 -69149225 + Charlie7 DNA MER1_type 38 534 -2078 1691 127 54 14 chr20 3004657 3004933 -69148949 + AluJo SINE Alu 7 293 -19 2096 114 0 17 chr20 3004939 3005236 -69148646 + AluSc SINE Alu 1 292 -17 2595 220 132 81 chr20 3005236 3005432 -69148450 + Charlie7 DNA MER1_type 538 723 -1889 986 163 12 25 chr20 3005432 3005592 -69148290 - FRAM SINE Alu -8 158 1 2595 220 132 81 chr20 3005592 3005631 -69148251 + Charlie7 DNA MER1_type 723 759 -1853 2196 120 10 0 chr20 3005631 3005939 -69147943 + AluSx SINE Alu 1 311 -1 2595 220 132 81 chr20 3005939 3006192 -69147690 + Charlie7 DNA MER1_type 759 998 -1614 1718 159 23 29 chr20 3006192 3006501 -69147381 - AluJb SINE Alu 0 312 6 2595 220 132 81 chr20 3006501 3006701 -69147181 + Charlie7 DNA MER1_type 998 1322 -1290 1258 117 0 22 chr20 3006888 3007068 -69146814 - AluJb SINE Alu -7 305 130 655 121 0 0 chr20 3007069 3007168 -69146714 + MER46A DNA MER2_type 138 236 0 431 139 28 65 chr20 3007169 3007277 -69146605 + Charlie7 DNA MER1_type 1695 1798 -814 2890 6 0 0 chr20 3007283 3007594 -69146288 + AluY SINE Alu 1 311 0 4594 147 42 50 chr20 3007653 3008633 -69145249 - L1MB7 LINE L1 -21 6163 5195 1188 175 79 32 chr20 3008626 3008708 -69145174 - L1M4 LINE L1 -486 5692 5615 * 2458 66 27 0 chr20 3008708 3009009 -69144873 - AluY SINE Alu 0 311 3 1188 175 79 32 chr20 3009009 3009206 -69144676 - L1M4 LINE L1 -563 5615 5400 273 118 79 13 chr20 3009224 3009300 -69144582 + Charlie7 DNA MER1_type 1890 1970 -642 266 200 0 0 chr20 3009326 3009376 -69144506 + L1MC5 LINE L1 7184 7233 -728 1279 226 52 65 chr20 3009575 3009694 -69144188 + L1MC5 LINE L1 7397 7516 -445 2264 93 17 0 chr20 3009694 3009984 -69143898 + AluSg SINE Alu 1 295 -15 1279 226 52 65 chr20 3009984 3010400 -69143482 + L1MC5 LINE L1 7516 7925 -36 679 232 255 50 chr20 3010424 3010473 -69143409 + Charlie7 DNA MER1_type 1970 2008 -604 2362 80 3 37 chr20 3010473 3010797 -69143085 + AluSp SINE Alu 1 313 0 679 232 255 50 chr20 3010797 3011272 -69142610 + Charlie7 DNA MER1_type 2008 2602 -10 1846 145 26 23 chr20 3012188 3012492 -69141390 + AluJo SINE Alu 1 305 -7 1665 162 3 46 chr20 3013805 3014107 -69139775 - AluJo SINE Alu -23 289 1 509 299 72 5 chr20 3014219 3014426 -69139456 + MIR SINE MIR 34 254 -8 315 343 204 20 chr20 3014604 3015213 -69138669 + L2 LINE L2 1983 2703 -611 1146 155 23 50 chr20 3015619 3015838 -69138044 + MER2 DNA MER2_type 1 213 -132 2274 118 0 0 chr20 3015918 3016224 -69137658 + AluSx SINE Alu 1 306 -6 2468 173 9 24 chr20 3016271 3016693 -69137189 + MER47B DNA MER2_type 2 417 -1 297 239 28 73 chr20 3017025 3017134 -69136748 + L2 LINE L2 3179 3282 -31 239 333 9 26 chr20 3018259 3018373 -69135509 - MER102b DNA MER1_type 0 341 230 834 182 8 0 chr20 3018385 3018517 -69135365 - FLAM_C SINE Alu 0 133 1 2437 60 0 10 chr20 3018615 3018916 -69134966 + AluY SINE Alu 1 298 -13 2008 122 3 28 chr20 3018983 3019294 -69134588 - AluSx SINE Alu 0 304 1 1845 129 3 44 chr20 3019420 3019739 -69134143 - AluSx SINE Alu 0 307 1 259 241 85 14 chr20 3019862 3020003 -69133879 - L1M4 LINE L1 -3219 2927 2777 2364 86 0 13 chr20 3020003 3020317 -69133565 + AluSx SINE Alu 1 310 -2 4415 177 50 111 chr20 3020397 3021291 -69132591 - L1MC4 LINE L1 -70 7972 7025 2275 114 0 0 chr20 3021291 3021598 -69132284 - AluSx SINE Alu -5 307 1 4415 177 50 111 chr20 3021598 3021814 -69132068 - L1MC4 LINE L1 -1017 7025 6797 2256 107 0 35 chr20 3021814 3021997 -69131885 - AluSq SINE Alu -5 308 139 2318 52 58 3 chr20 3021997 3022288 -69131594 - AluY SINE Alu -3 308 2 2256 107 0 35 chr20 3022288 3022423 -69131459 - AluSq SINE Alu -174 139 1 4415 177 50 111 chr20 3022423 3022485 -69131397 - L1MC4 LINE L1 -1245 6797 6888 2342 92 0 0 chr20 3022485 3022779 -69131103 + AluSx SINE Alu 1 294 -18 4415 177 50 111 chr20 3022779 3022959 -69130923 - L1MC4 LINE L1 -1153 6889 6700 979 120 0 63 chr20 3022977 3023135 -69130747 + AluSx SINE Alu 25 172 -140 562 239 90 21 chr20 3023181 3023369 -69130513 - MER74A LTR ERVL -5 553 353 355 318 0 16 chr20 3023587 3023716 -69130166 - L1MC4 LINE L1 -1378 6664 6538 2035 126 0 11 chr20 3023734 3024044 -69129838 + AluSx SINE Alu 1 307 0 752 165 85 73 chr20 3024057 3024221 -69129661 - FRAM SINE Alu 0 166 1 415 256 0 0 chr20 3024354 3024440 -69129442 + Tigger6 DNA MER2_type 1 86 -1511 2409 78 0 3 chr20 3024489 3024784 -69129098 + AluSq SINE Alu 5 298 -15 2150 97 4 0 chr20 3024873 3025180 -69128702 - AluSg SINE Alu 0 308 1 2194 120 3 0 chr20 3025795 3026096 -69127786 - AluSx SINE Alu -10 302 1 984 228 53 22 chr20 3026825 3026953 -69126929 + MIR SINE MIR 25 165 -97 1488 119 38 38 chr20 3026953 3027189 -69126693 + MER46A DNA MER2_type 1 236 0 984 228 53 22 chr20 3027189 3027288 -69126594 + MIR SINE MIR 165 259 -3 1702 191 3 7 chr20 3027316 3027614 -69126268 + AluJo SINE Alu 1 297 -15 1544 167 20 40 chr20 3027824 3028124 -69125758 - AluJo SINE Alu -18 294 1 2224 100 7 3 chr20 3028300 3028600 -69125282 + AluSc SINE Alu 1 301 -8 1953 158 42 36 chr20 3028859 3029194 -69124688 + MER1B DNA MER1_type 1 337 0 21 0 0 0 chr20 3029407 3029428 -69124454 + AT_rich Low_complexity Low_complexity 1 21 0 2160 108 30 3 chr20 3029599 3029896 -69123986 - AluSp SINE Alu -8 305 1 7886 178 69 69 chr20 3030329 3032186 -69121696 - Cheshire DNA MER1_type -18 2402 542 694 177 123 140 chr20 3032186 3032429 -69121453 - MER8 DNA MER2_type 0 239 1 7886 178 69 69 chr20 3032429 3032520 -69121362 - Cheshire DNA MER1_type -1878 542 453 909 124 0 36 chr20 3032521 3032658 -69121224 + FLAM_C SINE Alu 1 132 -11 260 213 148 0 chr20 3032670 3032731 -69121151 - Cheshire DNA MER1_type -1953 467 398 572 221 8 30 chr20 3032787 3032918 -69120964 - Cheshire DNA MER1_type -2002 418 291 691 209 9 0 chr20 3033091 3033222 -69120660 + AluJb SINE Alu 174 305 0 1981 117 50 3 chr20 3033222 3033520 -69120362 + AluSx SINE Alu 1 312 0 465 202 71 0 chr20 3033536 3033635 -69120247 - Cheshire DNA MER1_type -2184 236 131 512 108 54 6 chr20 3033639 3033806 -69120076 + (TATAA)n Simple_repeat Simple_repeat 5 179 0 22 80 0 0 chr20 3033817 3033867 -69120015 + AT_rich Low_complexity Low_complexity 1 50 0 412 44 44 81 chr20 3033867 3034169 -69119713 + (TA)n Simple_repeat Simple_repeat 1 290 0 289 79 110 12 chr20 3034191 3034355 -69119527 + (TA)n Simple_repeat Simple_repeat 1 180 0 28 0 0 0 chr20 3034362 3034390 -69119492 + AT_rich Low_complexity Low_complexity 1 28 0 905 136 268 132 chr20 3034391 3034505 -69119377 - AluJo SINE Alu 0 302 205 2494 68 10 7 chr20 3034505 3034815 -69119067 - AluY SINE Alu 0 311 1 905 136 268 132 chr20 3034815 3034965 -69118917 - AluJo SINE Alu -97 205 2 25 51 0 0 chr20 3035005 3035044 -69118838 + AT_rich Low_complexity Low_complexity 1 39 0 1893 155 0 14 chr20 3035871 3036167 -69117715 + AluJb SINE Alu 1 292 -20 2004 136 0 13 chr20 3036248 3036556 -69117326 + AluJb SINE Alu 1 304 -8 256 220 20 0 chr20 3036609 3036659 -69117223 + MER3 DNA MER1_type 41 91 -118 * 391 174 47 23 chr20 3036633 3036719 -69117163 - MER3 DNA MER1_type -120 89 2 4243 217 100 26 chr20 3036873 3037004 -69116878 - L1MC4 LINE L1 0 7808 7688 2173 125 0 7 chr20 3037004 3037308 -69116574 + AluSx SINE Alu 1 302 -10 4243 217 100 26 chr20 3037308 3038356 -69115526 - L1MC4 LINE L1 -120 7688 6588 315 0 0 0 chr20 3038356 3038391 -69115491 + (TG)n Simple_repeat Simple_repeat 2 36 0 4243 217 100 26 chr20 3038391 3038550 -69115332 - L1MC4 LINE L1 -1220 6588 6442 1108 268 7 30 chr20 3038649 3038918 -69114964 - MER82 DNA MER2_type 0 653 391 949 122 6 72 chr20 3038918 3038989 -69114893 - L1MB5 LINE L1 -287 5887 5813 997 188 11 23 chr20 3038989 3039165 -69114717 - FAM SINE Alu 0 175 2 949 122 6 72 chr20 3039165 3039274 -69114608 - L1MB5 LINE L1 -361 5813 5719 1938 152 104 89 chr20 3039277 3039616 -69114266 - L1MB5 LINE L1 -748 5398 5065 1637 156 54 4 chr20 3039616 3039892 -69113990 + AluSx SINE Alu 1 290 -22 1938 152 104 89 chr20 3039892 3039944 -69113938 - L1MB5 LINE L1 -1081 5065 5015 1984 126 3 13 chr20 3039944 3040245 -69113637 - AluJb SINE Alu -6 306 9 1938 152 104 89 chr20 3040245 3040400 -69113482 - L1MB5 LINE L1 -1131 5015 4843 417 279 0 0 chr20 3040400 3040486 -69113396 + AluJ/FLAM SINE Alu 5 90 -222 * 844 175 91 0 chr20 3040482 3040636 -69113246 + AluJo/FRAM SINE Alu 136 303 -9 1198 177 12 36 chr20 3040636 3040858 -69113024 - L1MB5 LINE L1 -1291 4855 4638 2270 92 3 3 chr20 3040858 3041152 -69112730 - AluSx SINE Alu -2 310 17 1198 177 12 36 chr20 3041152 3041178 -69112704 - L1MB5 LINE L1 -1508 4638 4613 468 304 112 25 chr20 3041221 3041586 -69112296 - L1MEd LINE L1 -5710 409 13 814 164 25 0 chr20 3041601 3041723 -69112159 + FLAM_A SINE Alu 1 125 -8 2105 101 0 0 chr20 3041742 3042019 -69111863 + AluSg1 SINE Alu 24 300 -9 571 177 113 40 chr20 3042101 3042225 -69111657 - FLAM_A SINE Alu 0 133 1 558 267 53 65 chr20 3042699 3042961 -69110921 + MIR SINE MIR 4 262 0 280 257 135 0 chr20 3043379 3043453 -69110429 - L2 LINE L2 -26 3246 3163 595 159 62 9 chr20 3043455 3043568 -69110314 - FRAM SINE Alu -13 163 45 1441 209 95 0 chr20 3043714 3044020 -69109862 + MER58B DNA MER1_type 4 338 -3 422 189 32 162 chr20 3044242 3044427 -69109455 - MER5B DNA MER1_type -1 177 17 180 0 0 0 chr20 3045233 3045253 -69108629 + (T)n Simple_repeat Simple_repeat 1 20 0 327 329 89 0 chr20 3045560 3045718 -69108164 - LTR16A LTR ERVL -3 447 276 986 196 16 21 chr20 3045819 3046008 -69107874 - MER20 DNA MER1_type -1 218 31 225 0 0 0 chr20 3046245 3046270 -69107612 + (ATTG)n Simple_repeat Simple_repeat 4 28 0 2203 89 0 7 chr20 3046270 3046552 -69107330 - AluSx SINE Alu -32 280 1 2104 124 10 0 chr20 3046555 3046845 -69107037 - AluSx SINE Alu -19 293 1 1121 207 50 0 chr20 3046846 3047068 -69106814 - AluJo SINE Alu -21 291 59 21 0 0 0 chr20 3047313 3047334 -69106548 + AT_rich Low_complexity Low_complexity 1 21 0 194 262 24 0 chr20 3047358 3047400 -69106482 + MER5B DNA MER1_type 7 49 -129 2244 106 3 3 chr20 3047427 3047729 -69106153 + AluSq SINE Alu 1 302 -11 1447 223 58 81 chr20 3047804 3048047 -69105835 + L1ME3 LINE L1 5541 5788 -374 1681 144 53 14 chr20 3048047 3048331 -69105551 + AluSg SINE Alu 1 295 -15 1447 223 58 81 chr20 3048331 3048594 -69105288 + L1ME3 LINE L1 5788 6037 -125 2311 102 0 0 chr20 3048594 3048889 -69104993 - AluSc SINE Alu -14 295 1 1447 223 58 81 chr20 3048889 3048914 -69104968 + L1ME3 LINE L1 6037 6061 -101 3759 131 20 70 chr20 3048935 3049442 -69104440 - L1MB3 LINE L1 -12 6171 5707 2202 115 6 13 chr20 3049442 3049756 -69104126 + AluSx SINE Alu 1 312 0 3759 131 20 70 chr20 3049756 3049950 -69103932 - L1MB3 LINE L1 -476 5707 5505 1475 168 185 45 chr20 3050124 3050526 -69103356 - MLT1C LTR MaLR -2 465 8 259 218 0 0 chr20 3050516 3050571 -69103311 + AluJ/monomer SINE Alu 247 301 -1 * 192 152 0 0 chr20 3050644 3050677 -69103205 + CT-rich Low_complexity Low_complexity 2 34 0 2308 108 0 6 chr20 3050687 3051001 -69102881 - AluSx SINE Alu 0 312 1 760 71 152 0 chr20 3051001 3051113 -69102769 - AluSc SINE Alu -176 133 5 2093 116 0 0 chr20 3051642 3051918 -69101964 + AluSx SINE Alu 5 280 -32 195 100 0 0 chr20 3051918 3051948 -69101934 + (CAAT)n Simple_repeat Simple_repeat 4 33 0 602 238 106 58 chr20 3051954 3052030 -69101852 - HAL1 LINE L1 -796 1711 1640 207 0 0 0 chr20 3052030 3052053 -69101829 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1983 84 103 0 chr20 3052055 3052318 -69101564 - AluY SINE Alu -21 290 1 602 238 106 58 chr20 3052318 3052549 -69101333 - HAL1 LINE L1 -867 1640 1386 326 259 26 0 chr20 3052613 3052729 -69101153 - HAL1 LINE L1 -1279 1228 1110 1786 161 47 3 chr20 3052729 3053027 -69100855 - AluJb SINE Alu -1 311 1 1048 82 7 7 chr20 3053027 3053162 -69100720 - AluJb SINE Alu -177 135 1 1646 158 18 52 chr20 3053430 3053453 -69100429 + MLT1B LTR MaLR 74 96 -294 1915 180 0 0 chr20 3053453 3053753 -69100129 + AluJo SINE Alu 1 300 -12 1646 158 18 52 chr20 3053753 3054057 -69099825 + MLT1B LTR MaLR 96 390 0 2186 154 103 19 chr20 3054357 3054786 -69099096 - MLT1C LTR MaLR -2 465 1 194 284 32 42 chr20 3054991 3055086 -69098796 + MER5A DNA MER1_type 57 150 -39 261 0 0 0 chr20 3055629 3055658 -69098224 + (TG)n Simple_repeat Simple_repeat 2 30 0 688 159 130 22 chr20 3055660 3055798 -69098084 - FRAM SINE Alu -30 146 1 212 226 189 0 chr20 3055803 3055856 -69098026 + L2 LINE L2 3208 3270 -2 276 317 30 10 chr20 3055891 3055992 -69097890 + L2 LINE L2 3208 3310 -3 389 209 129 25 chr20 3057073 3057236 -69096646 - L1MC/D LINE L1 -2322 5486 5307 1914 147 3 22 chr20 3057327 3057346 -69096536 - AluSx SINE Alu -5 307 289 288 0 0 0 chr20 3057346 3057378 -69096504 + (TTGG)n Simple_repeat Simple_repeat 4 35 0 1914 147 3 22 chr20 3057378 3057671 -69096211 - AluSx SINE Alu -23 289 1 1511 165 8 12 chr20 3058051 3058306 -69095576 - AluJb SINE Alu -49 263 10 289 148 136 34 chr20 3058482 3058570 -69095312 - L1MD3 LINE L1 0 7995 7899 2222 116 3 0 chr20 3058580 3058882 -69095000 - AluSx SINE Alu -9 303 1 3520 117 10 54 chr20 3058954 3059480 -69094402 - L1MA8 LINE L1 -181 6110 5612 1254 189 96 62 chr20 3059480 3059645 -69094237 - AluJo SINE Alu -1 301 120 2090 120 0 13 chr20 3059645 3059944 -69093938 + AluSq SINE Alu 3 297 -16 1254 189 96 62 chr20 3059944 3060069 -69093813 - AluJo SINE Alu -182 120 1 3520 117 10 54 chr20 3060069 3060139 -69093743 - L1MA8 LINE L1 -679 5612 5540 2806 185 125 146 chr20 3060193 3060238 -69093644 - L1ME LINE L1 -3890 2650 2606 901 148 0 15 chr20 3060238 3060373 -69093509 - FLAM_C SINE Alu 0 133 1 1805 137 3 45 chr20 3060379 3060671 -69093211 - AluJb SINE Alu -20 292 13 2806 185 125 146 chr20 3060671 3061028 -69092854 - L1ME LINE L1 -3939 2601 2238 2329 105 0 3 chr20 3061028 3061332 -69092550 - AluSc SINE Alu -5 304 2 2806 185 125 146 chr20 3061332 3061948 -69091934 - L1ME LINE L1 -4302 2238 1610 833 183 0 0 chr20 3061948 3062068 -69091814 + FLAM_C SINE Alu 2 121 -22 2806 185 125 146 chr20 3062068 3062087 -69091795 - L1ME LINE L1 -4930 1610 1592 2209 117 0 3 chr20 3062087 3062394 -69091488 - AluSx SINE Alu -4 308 3 2806 185 125 146 chr20 3062394 3063262 -69090620 - L1ME LINE L1 -4948 1592 730 953 244 29 77 chr20 3063432 3063735 -69090147 - L1ME LINE L1 -6181 359 76 2375 84 0 10 chr20 3063735 3064046 -69089836 + AluSq SINE Alu 1 308 -5 953 244 29 77 chr20 3064046 3064119 -69089763 - L1ME LINE L1 -6464 76 1 765 200 0 15 chr20 3064230 3064365 -69089517 - FLAM_A SINE Alu 0 133 1 291 346 0 0 chr20 3064396 3064474 -69089408 + MER58 DNA MER1_type 1 78 -263 719 165 9 0 chr20 3064475 3064590 -69089292 - AluJb SINE Alu -15 297 182 683 183 107 0 chr20 3064616 3064747 -69089135 + MER58 DNA MER1_type 142 2365 -55 2281 83 6 22 chr20 3064924 3065236 -69088646 - AluSx SINE Alu 0 312 6 550 308 125 76 chr20 3065429 3066000 -69087882 + L2 LINE L2 2654 3251 -21 215 204 45 0 chr20 3065966 3066010 -69087872 + MIR SINE MIR 214 259 -3 * 337 351 32 5 chr20 3066054 3066239 -69087643 - L1MEc LINE L1 -2235 4191 4002 344 305 17 17 chr20 3066291 3066468 -69087414 - L1MEc LINE L1 -3835 2591 2415 490 193 274 0 chr20 3066495 3066630 -69087252 + MLT2D LTR ERVL 189 360 -54 29 0 0 0 chr20 3066635 3066664 -69087218 + AT_rich Low_complexity Low_complexity 1 29 0 1063 119 134 20 chr20 3066719 3066920 -69086962 - MER44D DNA MER2_type 0 605 327 606 149 0 91 chr20 3067032 3067153 -69086729 + Tigger7 DNA MER2_type 2378 2487 0 27 92 0 0 chr20 3067153 3067229 -69086653 + AT_rich Low_complexity Low_complexity 1 76 0 1243 222 52 10 chr20 3067246 3067534 -69086348 - MLT2D LTR ERVL -114 300 1 1194 208 12 8 chr20 3067534 3067775 -69086107 - ERVL-D LTR ERVL -7 5757 5516 1342 255 85 51 chr20 3067817 3067950 -69085932 - MLT1H LTR MaLR -1 548 421 2244 119 0 3 chr20 3067950 3068252 -69085630 - AluSx SINE Alu -11 301 1 1342 255 85 51 chr20 3068252 3068648 -69085234 - MLT1H LTR MaLR -128 421 1 633 266 50 54 chr20 3068654 3069105 -69084777 - L1MEc LINE L1 -4928 1648 1114 270 0 0 0 chr20 3069493 3069523 -69084359 + (TG)n Simple_repeat Simple_repeat 2 31 0 180 0 0 0 chr20 3069534 3069554 -69084328 + (TTTA)n Simple_repeat Simple_repeat 3 22 0 1971 151 0 0 chr20 3069557 3069841 -69084041 + AluSx SINE Alu 1 284 -28 185 197 16 0 chr20 3069841 3069902 -69083980 + (TA)n Simple_repeat Simple_repeat 1 62 0 2521 75 0 0 chr20 3070478 3070786 -69083096 + AluSg SINE Alu 1 308 -2 2465 71 0 3 chr20 3072582 3072891 -69080991 + AluY SINE Alu 3 310 -1 206 121 0 0 chr20 3073213 3073246 -69080636 + (T)n Simple_repeat Simple_repeat 1 33 0 818 136 24 16 chr20 3073377 3073502 -69080380 - FLAM_C SINE Alu -17 126 1 839 276 120 27 chr20 3073504 3074267 -69079615 - L1 LINE L1 -1983 4163 3277 2462 53 0 17 chr20 3074267 3074567 -69079315 + AluY SINE Alu 1 295 -16 839 276 120 27 chr20 3074567 3074605 -69079277 - L1 LINE L1 -2869 3277 3244 633 269 19 54 chr20 3074712 3074972 -69078910 - L1ME1 LINE L1 -15 6151 5901 2267 93 3 7 chr20 3074999 3075309 -69078573 - AluY SINE Alu -1 310 2 1830 221 93 14 chr20 3075326 3075769 -69078113 + MER74A LTR ERVL 77 554 -4 2068 93 68 0 chr20 3075769 3076049 -69077833 + AluSc SINE Alu 1 299 -10 1352 211 34 10 chr20 3076049 3076453 -69077429 - L1ME1 LINE L1 -583 5583 5170 4399 130 24 42 chr20 3076454 3077153 -69076729 - L1MB3 LINE L1 -7 6176 5489 2265 113 3 0 chr20 3077153 3077463 -69076419 - AluY SINE Alu 0 311 1 4399 130 24 42 chr20 3077463 3077508 -69076374 - L1MB3 LINE L1 -694 5489 5445 1846 147 51 0 chr20 3077509 3077801 -69076081 - AluSg SINE Alu -3 307 1 180 0 0 0 chr20 3077804 3077824 -69076058 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 1702 138 33 53 chr20 3077829 3077988 -69075894 - AluJo SINE Alu -14 298 146 2389 76 13 3 chr20 3077988 3078289 -69075593 - AluSq SINE Alu -9 304 1 1702 138 33 53 chr20 3078289 3078433 -69075449 - AluJo SINE Alu -166 146 1 2274 227 52 5 chr20 3078433 3079053 -69074829 - L1MB3 LINE L1 -814 5332 4684 193 345 171 29 chr20 3079848 3080329 -69073553 + L2 LINE L2 2342 2890 -424 326 173 0 0 chr20 3080512 3080608 -69073274 + AluJ/FRAM SINE Alu 232 327 0 1271 244 128 28 chr20 3080611 3080914 -69072968 - L1MC/D LINE L1 -2029 5779 5419 2433 70 0 0 chr20 3080914 3081212 -69072670 + AluY SINE Alu 1 298 -13 1271 244 128 28 chr20 3081212 3081338 -69072544 - L1MC/D LINE L1 -2389 5419 5307 218 289 70 23 chr20 3081348 3081476 -69072406 - L2 LINE L2 -1476 1838 1705 652 320 114 47 chr20 3081615 3082386 -69071496 - L2 LINE L2 -1856 1458 636 2236 82 6 79 chr20 3082449 3082779 -69071103 + AluSx SINE Alu 1 306 -6 4885 180 66 29 chr20 3083510 3083581 -69070301 - L1MC1 LINE L1 -2 6331 6264 2064 150 0 0 chr20 3083581 3083881 -69070001 + AluSg SINE Alu 1 300 -10 4885 180 66 29 chr20 3083881 3084160 -69069722 - L1MC1 LINE L1 -69 6264 5997 2464 55 7 0 chr20 3084160 3084453 -69069429 - AluY SINE Alu -12 299 5 1717 186 7 7 chr20 3084457 3084747 -69069135 - AluJo SINE Alu -22 290 1 4885 180 66 29 chr20 3084747 3086136 -69067746 - L1MC1 LINE L1 -338 5995 4518 237 282 107 23 chr20 3086272 3086403 -69067479 - L1MC/D LINE L1 -1096 5050 4909 248 345 12 12 chr20 3086867 3086951 -69066931 + L2 LINE L2 3151 3234 -38 271 234 0 0 chr20 3087125 3087189 -69066693 - MER5B DNA MER1_type -18 160 97 2028 122 28 0 chr20 3087232 3087520 -69066362 + AluSx SINE Alu 3 298 -14 743 148 74 0 chr20 3087545 3087667 -69066215 + MER46A DNA MER2_type 1 131 -105 1674 184 3 14 chr20 3087667 3087960 -69065922 + AluJo SINE Alu 1 290 -22 309 258 72 0 chr20 3089771 3089868 -69064014 + MIR SINE MIR 94 197 -65 834 216 45 61 chr20 3090107 3090352 -69063530 + MIR SINE MIR 1 241 -21 1823 264 169 22 chr20 3091285 3091489 -69062393 - HAL1 LINE L1 -271 2236 2063 2062 139 0 0 chr20 3091489 3091777 -69062105 + AluJb SINE Alu 1 288 -24 1823 264 169 22 chr20 3091777 3092522 -69061360 - HAL1 LINE L1 -444 2063 1147 1634 181 10 14 chr20 3092542 3092834 -69061048 + AluJo SINE Alu 1 291 -21 1775 151 20 37 chr20 3092836 3093135 -69060747 + AluSx SINE Alu 1 294 -18 2072 116 10 0 chr20 3093163 3093455 -69060427 - AluSg SINE Alu -15 295 1 826 69 0 0 chr20 3093483 3093585 -69060297 + AluY SINE Alu 1 102 -209 2266 70 0 14 chr20 3093595 3093906 -69059976 + AluY SINE Alu 1 307 0 937 289 152 38 chr20 3094047 3094716 -69059166 - L1MC/D LINE L1 -743 5403 4812 180 0 0 0 chr20 3094716 3094736 -69059146 + (TG)n Simple_repeat Simple_repeat 2 21 0 937 289 152 38 chr20 3094736 3095740 -69058142 - L1MC/D LINE L1 -1334 4812 3850 1899 89 44 4 chr20 3095745 3096039 -69057843 - AluSg SINE Alu 0 305 1 1366 197 16 4 chr20 3096152 3096401 -69057481 - AluJo SINE Alu -48 264 13 1887 152 0 10 chr20 3096634 3096930 -69056952 - AluJb SINE Alu -19 293 1 436 293 146 40 chr20 3096930 3097333 -69056549 - L1MC/D LINE L1 -2751 3395 2950 800 267 105 83 chr20 3097346 3097802 -69056080 - MLT1J LTR MaLR -21 429 1 2294 89 3 19 chr20 3097848 3098164 -69055718 - AluY SINE Alu 0 311 1 877 211 6 6 chr20 3098174 3098335 -69055547 - AluSg/x SINE Alu -25 285 125 1922 93 4 16 chr20 3098340 3098598 -69055284 - AluSx SINE Alu -15 297 43 2377 73 0 51 chr20 3100906 3101219 -69052663 + AluSg SINE Alu 1 297 -13 1747 151 4 0 chr20 3101307 3101566 -69052316 + AluJb SINE Alu 34 293 -19 194 136 23 0 chr20 3101685 3101729 -69052153 + (TA)n Simple_repeat Simple_repeat 1 45 0 921 211 51 0 chr20 3102622 3102797 -69051085 - MER58A DNA MER1_type -39 185 2 270 310 164 41 chr20 3102897 3103068 -69050814 - MIR SINE MIR -50 212 21 446 267 58 58 chr20 3103219 3103432 -69050450 - L1MEd LINE L1 -1218 1272 963 1660 124 0 87 chr20 3103432 3103754 -69050128 - AluJo SINE Alu -18 294 1 2134 110 3 0 chr20 3103802 3104122 -69049760 - AluSp SINE Alu 0 313 1 1731 132 64 0 chr20 3104196 3104477 -69049405 + AluSx SINE Alu 1 299 -13 669 160 15 61 chr20 3104486 3104617 -69049265 + FLAM_C SINE Alu 9 133 -10 529 273 49 23 chr20 3104991 3105255 -69048627 + L1MC5 LINE L1 7513 7783 -178 969 228 39 0 chr20 3105277 3105483 -69048399 + MER20 DNA MER1_type 1 214 -5 2030 92 7 0 chr20 3105989 3106270 -69047612 - AluSg SINE Alu 0 310 28 433 272 67 56 chr20 3106386 3106566 -69047316 - L2 LINE L2 -18 3295 3114 2244 97 0 10 chr20 3106609 3106908 -69046974 - AluSg SINE Alu -14 296 1 246 284 265 0 chr20 3106920 3107022 -69046860 - MIR SINE MIR -17 245 117 1482 298 155 34 chr20 3107029 3108013 -69045869 - L2 LINE L2 -200 3072 1977 998 266 63 39 chr20 3108067 3108480 -69045402 + L2 LINE L2 1656 2078 -1236 942 284 135 31 chr20 3108487 3109044 -69044838 + L2 LINE L2 2697 3310 -3 515 296 45 38 chr20 3109040 3109304 -69044578 - L2 LINE L2 -1345 1969 1704 * 545 151 35 0 chr20 3109703 3109789 -69044093 - AluJ/FLAM SINE Alu -223 89 1 1498 185 11 0 chr20 3109795 3110113 -69043769 - AluJb SINE Alu 0 325 5 454 257 136 7 chr20 3110305 3110445 -69043437 - L2 LINE L2 -14 3299 3142 474 333 26 19 chr20 3112616 3112772 -69041110 - L2 LINE L2 -1 3271 3115 2181 88 0 0 chr20 3113069 3113352 -69040530 + AluSc SINE Alu 7 289 -20 209 361 52 0 chr20 3113354 3113451 -69040431 - L2 LINE L2 -228 3044 2943 239 368 39 45 chr20 3113621 3113646 -69040236 - L2 LINE L2 -601 2713 2689 2237 88 0 0 chr20 3113646 3113942 -69039940 + AluY SINE Alu 1 296 -15 239 368 39 45 chr20 3113942 3114071 -69039811 - L2 LINE L2 -625 2689 2560 378 252 160 28 chr20 3114094 3114342 -69039540 - MLT1L LTR MaLR -107 508 126 1547 174 3 46 chr20 3114346 3114650 -69039232 + AluJb SINE Alu 1 291 -21 270 273 153 40 chr20 3114762 3114912 -69038970 - L2 LINE L2 -566 2748 2582 2112 100 0 35 chr20 3114983 3115294 -69038588 + AluSq SINE Alu 2 301 -12 315 206 279 29 chr20 3115622 3115758 -69038124 - MER70-int LTR ERVL -1517 4137 3968 406 251 21 112 chr20 3116059 3116150 -69037732 - MER70-int LTR ERVL -2183 3471 3404 2230 99 0 0 chr20 3116150 3116452 -69037430 + AluSq SINE Alu 6 307 -6 406 251 21 112 chr20 3116452 3116547 -69037335 - MER70-int LTR ERVL -2250 3404 3302 1501 169 37 4 chr20 3116721 3116994 -69036888 + AluJo SINE Alu 1 282 -30 264 254 48 0 chr20 3117074 3117137 -69036745 - MER70-int LTR ERVL -3260 1763 1698 252 122 0 0 chr20 3117822 3117863 -69036019 + (CAGA)n Simple_repeat Simple_repeat 3 43 0 668 312 59 30 chr20 3117888 3118225 -69035657 - MER70-int LTR ERVL -3574 2080 1734 2238 98 0 0 chr20 3118758 3119055 -69034827 + AluSx SINE Alu 1 297 -15 814 142 0 0 chr20 3119208 3119328 -69034554 - FLAM_C SINE Alu -23 120 1 253 219 29 109 chr20 3120011 3120148 -69033734 - LTR67 LTR ERVL -3 554 429 498 254 202 21 chr20 3120490 3121045 -69032837 + L1MC4a LINE L1 5213 5399 -747 257 295 129 20 chr20 3121285 3121512 -69032370 + L3 LINE CR1 966 1269 -308 1335 132 26 161 chr20 3121759 3122107 -69031775 + AluJo SINE Alu 1 301 -1 278 311 146 0 chr20 3122531 3122634 -69031248 + L3 LINE CR1 1388 1505 -72 330 183 44 29 chr20 3122778 3122915 -69030967 + (TATAA)n Simple_repeat Simple_repeat 5 143 0 2484 260 121 17 chr20 3122935 3123914 -69029968 + L1ME2 LINE L1 4283 5484 -680 1978 113 0 14 chr20 3123914 3124206 -69029676 + AluSg SINE Alu 1 288 -22 2484 260 121 17 chr20 3124206 3124697 -69029185 + L1ME2 LINE L1 5484 5922 -242 21 82 0 0 chr20 3124876 3124925 -69028957 + AT_rich Low_complexity Low_complexity 1 49 0 1377 108 5 27 chr20 3125847 3126070 -69027812 + AluJo SINE Alu 85 302 -10 2226 95 3 3 chr20 3126233 3126537 -69027345 - AluSp SINE Alu -9 304 1 555 293 163 49 chr20 3126600 3127204 -69026678 + L2 LINE L2 2636 3313 0 327 307 78 42 chr20 3127219 3127411 -69026471 - L1ME LINE L1 -353 5768 5570 1555 168 32 36 chr20 3127447 3127756 -69026126 - AluJo SINE Alu -4 308 1 267 228 14 44 chr20 3127889 3127926 -69025956 - MIR SINE MIR -66 142 143 2232 99 0 0 chr20 3127926 3128228 -69025654 - AluSx SINE Alu -10 302 1 267 228 14 44 chr20 3128228 3128290 -69025592 - MIR SINE MIR -64 144 82 1744 161 3 10 chr20 3129186 3129491 -69024391 + AluJo SINE Alu 10 312 0 717 186 23 0 chr20 3129938 3130067 -69023815 - FLAM_C SINE Alu -10 133 2 1287 198 72 0 chr20 3130103 3130381 -69023501 - AluJo SINE Alu -6 306 9 309 246 64 9 chr20 3130412 3130522 -69023360 + Charlie7 DNA MER1_type 2496 2611 -1 1842 121 37 14 chr20 3130543 3130840 -69023042 - AluSx SINE Alu -8 304 1 213 189 0 0 chr20 3130879 3130916 -69022966 + (TG)n Simple_repeat Simple_repeat 2 38 0 391 187 81 80 chr20 3130955 3131164 -69022718 - L1MC4a LINE L1 -312 5809 5669 288 111 0 0 chr20 3131705 3131750 -69022132 + (TG)n Simple_repeat Simple_repeat 2 46 0 2672 108 52 70 chr20 3132081 3132522 -69021360 + L1MB3 LINE L1 5694 6126 -57 1902 77 19 71 chr20 3132522 3132832 -69021050 + AluSx SINE Alu 1 294 -18 2672 108 52 70 chr20 3132832 3132889 -69020993 + L1MB3 LINE L1 6126 6183 0 990 286 95 40 chr20 3133701 3133764 -69020118 - MLT1L LTR MaLR -4 611 553 1828 149 7 3 chr20 3133764 3134060 -69019822 - AluSx SINE Alu -15 297 1 990 286 95 40 chr20 3134060 3134257 -69019625 - MLT1L LTR MaLR -62 553 368 2578 45 0 0 chr20 3134257 3134568 -69019314 + AluY SINE Alu 1 311 0 990 286 95 40 chr20 3134568 3134884 -69018998 - MLT1L LTR MaLR -247 368 2 316 250 0 25 chr20 3135214 3135294 -69018588 - L2 LINE L2 -1 3271 3194 209 346 39 0 chr20 3135424 3135528 -69018354 - L2 LINE L2 -251 3021 2914 428 255 46 72 chr20 3135603 3135756 -69018126 - LTR67 LTR ERVL 0 557 409 392 300 61 33 chr20 3135798 3135978 -69017904 - LTR67 LTR ERVL -259 298 114 510 198 9 9 chr20 3136714 3136830 -69017052 - L1MB8 LINE L1 -15 6163 6048 614 185 62 19 chr20 3136830 3136992 -69016890 - L1MB8 LINE L1 -5 6173 6005 2122 89 24 0 chr20 3137330 3137621 -69016261 - AluSp SINE Alu -15 298 1 2038 112 0 20 chr20 3138266 3138569 -69015313 + AluSx SINE Alu 1 297 -15 1979 118 13 22 chr20 3139201 3139516 -69014366 - AluSx SINE Alu 0 312 1 1830 142 28 0 chr20 3140376 3140658 -69013224 + AluSx SINE Alu 1 290 -22 1149 243 165 27 chr20 3140749 3141300 -69012582 - HAL1 LINE L1 -221 2286 1660 271 0 25 25 chr20 3142111 3142151 -69011731 + (TTTTG)n Simple_repeat Simple_repeat 2 41 0 6318 62 21 26 chr20 3142151 3144018 -69009864 - SVA Other Other -520 1369 13 2109 63 45 11 chr20 3144021 3144308 -69009574 - AluY SINE Alu -14 297 1 282 284 63 63 chr20 3145741 3145868 -69008014 + MIR3 SINE MIR 3 129 -79 4202 171 50 37 chr20 3146850 3147806 -69006076 + LTR5 LTR ERVK 1 969 0 986 215 25 10 chr20 3148801 3149001 -69004881 - MER58A DNA MER1_type -15 209 7 2265 97 0 0 chr20 3149083 3149382 -69004500 + AluSg SINE Alu 1 299 -11 2178 107 3 0 chr20 3149499 3149797 -69004085 + AluSx SINE Alu 2 300 -12 351 176 51 95 chr20 3149803 3149847 -69004035 - MER5A DNA MER1_type -80 109 65 2004 117 30 0 chr20 3149847 3150147 -69003735 - AluSq SINE Alu -4 309 1 351 176 51 95 chr20 3150147 3150214 -69003668 - MER5A DNA MER1_type -124 65 4 332 316 33 61 chr20 3152326 3152538 -69001344 - L3 LINE CR1 -10 1567 1362 201 303 248 41 chr20 3152549 3152839 -69001043 - L2 LINE L2 -416 2898 2549 356 263 157 67 chr20 3152860 3153027 -69000855 - L3 LINE CR1 -611 966 815 2019 133 3 13 chr20 3153027 3153046 -69000836 - AluJb SINE Alu -14 298 280 217 0 0 0 chr20 3153046 3153070 -69000812 + (TTTG)n Simple_repeat Simple_repeat 1 176 0 2019 133 3 13 chr20 3153070 3153350 -69000532 - AluJb SINE Alu -32 280 2 356 263 157 67 chr20 3153350 3153451 -69000431 - L3 LINE CR1 -762 815 666 2022 116 46 0 chr20 3153451 3153736 -69000146 - AluSx SINE Alu -12 300 3 356 263 157 67 chr20 3153736 3153766 -69000116 - L3 LINE CR1 -911 666 640 2230 129 20 0 chr20 3154587 3154890 -68998992 - AluSx SINE Alu -3 309 1 2148 295 171 47 chr20 3155326 3156396 -68997486 + L2 LINE L2 605 1542 -1772 2374 98 0 0 chr20 3156396 3156691 -68997191 + AluSc SINE Alu 1 295 -14 2148 295 171 47 chr20 3156691 3157524 -68996358 + L2 LINE L2 1542 2743 -571 2497 70 7 0 chr20 3157530 3157831 -68996051 + AluSp SINE Alu 1 303 -10 2192 122 7 7 chr20 3157900 3158196 -68995686 + AluSx SINE Alu 4 299 -13 408 198 79 0 chr20 3158822 3158923 -68994959 - L2 LINE L2 -4 3268 3160 193 196 87 0 chr20 3160540 3160586 -68993296 + L2 LINE L2 3219 3268 -4 184 321 99 30 chr20 3163656 3163787 -68990095 - L2 LINE L2 -228 3044 2905 2106 125 7 3 chr20 3164799 3165095 -68988787 + AluJb SINE Alu 1 297 -15 2392 92 13 0 chr20 3165097 3165403 -68988479 + AluSx SINE Alu 1 310 -2 21 0 0 0 chr20 3165403 3165424 -68988458 + AT_rich Low_complexity Low_complexity 1 21 0 26 50 0 0 chr20 3170436 3170476 -68983406 + GC_rich Low_complexity Low_complexity 1 40 0 2008 78 52 0 chr20 3171029 3171325 -68982557 + AluSx SINE Alu 1 310 0 772 221 121 5 chr20 3172084 3172283 -68981599 + MER58A DNA MER1_type 2 223 -1 2575 66 3 0 chr20 3172923 3173227 -68980655 - AluY SINE Alu -6 305 1 349 273 76 0 chr20 3174526 3174658 -68979224 - HERVL LTR ERVL -2987 2667 2526 1752 97 112 4 chr20 3175210 3175477 -68978405 + AluSx SINE Alu 1 296 -16 2254 104 3 0 chr20 3175902 3176191 -68977691 + AluSx SINE Alu 1 290 -22 1781 115 87 52 chr20 3176201 3176487 -68977395 + AluSx SINE Alu 1 296 -16 1893 166 6 29 chr20 3176625 3176939 -68976943 + AluJb SINE Alu 1 307 -5 678 235 18 54 chr20 3177255 3177476 -68976406 + MIR SINE MIR 40 252 -10 2234 79 32 7 chr20 3177481 3177792 -68976090 - AluSp SINE Alu 0 318 1 213 39 0 0 chr20 3177795 3177821 -68976061 + (TTA)n Simple_repeat Simple_repeat 2 27 0 2478 68 3 0 chr20 3178022 3178317 -68975565 - AluSp SINE Alu -15 298 3 2441 93 0 6 chr20 3178350 3178662 -68975220 + AluSx SINE Alu 1 310 -2 328 279 18 0 chr20 3178662 3178773 -68975109 - L1MC4 LINE L1 -164 7878 7766 839 129 0 43 chr20 3178834 3178973 -68974909 - FLAM_C SINE Alu 0 133 1 1819 145 29 17 chr20 3178973 3179311 -68974571 - L1MB2 LINE L1 -346 7244 6902 1977 115 7 46 chr20 3179311 3179615 -68974267 - AluSx SINE Alu -3 309 18 248 122 41 41 chr20 3179699 3179748 -68974134 - L1MB2 LINE L1 -3400 4165 4117 2421 99 0 0 chr20 3179789 3180102 -68973780 - AluSp SINE Alu 0 313 1 405 290 21 11 chr20 3180103 3180289 -68973593 - L1MB2 LINE L1 -4345 3220 3033 916 184 72 28 chr20 3180301 3180366 -68973516 - L1MB2 LINE L1 -4903 2662 2601 1567 180 6 54 chr20 3180366 3180683 -68973199 - AluJo SINE Alu -5 307 6 916 184 72 28 chr20 3180683 3180867 -68973015 - L1MB2 LINE L1 -4964 2601 2402 925 143 0 0 chr20 3180868 3181001 -68972881 + AluSq/x SINE Alu 1 133 -180 1995 137 7 23 chr20 3181005 3181143 -68972739 + AluSq SINE Alu 1 140 -173 2908 3 0 3 chr20 3181143 3181451 -68972431 + AluYa5 SINE Alu 5 311 0 1995 137 7 23 chr20 3181451 3181619 -68972263 + AluSq SINE Alu 140 302 -11 2271 119 3 3 chr20 3181798 3182109 -68971773 - AluJb SINE Alu 0 312 2 454 344 69 20 chr20 3182128 3182426 -68971456 + ERVL LTR ERVL 2908 3253 -1927 2279 102 3 0 chr20 3182480 3182774 -68971108 - AluSx SINE Alu -2 310 16 2203 104 14 0 chr20 3182785 3183087 -68970795 - AluSq SINE Alu 0 306 1 275 75 0 57 chr20 3183088 3183141 -68970741 + L1MA9 LINE L1 6263 6312 0 1426 261 80 56 chr20 3183254 3183864 -68970018 + L1 LINE L1 1110 1734 -5475 402 223 10 0 chr20 3183895 3183998 -68969884 + L1 LINE L1 3264 3367 -3841 1614 94 163 12 chr20 3184053 3184321 -68969561 - AluSg1 SINE Alu 0 305 1 3013 159 31 64 chr20 3184388 3185155 -68968727 + L1 LINE L1 4068 4809 -2399 513 238 0 0 chr20 3185155 3185256 -68968626 - Tigger2 DNA MER2_type -10 2708 2608 4558 158 32 23 chr20 3185259 3185315 -68968567 + L1 LINE L1 5498 5552 -1656 2492 65 3 10 chr20 3185315 3185621 -68968261 + AluSg SINE Alu 3 306 -4 4558 158 32 23 chr20 3185621 3186246 -68967636 + L1 LINE L1 5552 6169 -1039 189 0 0 0 chr20 3186246 3186267 -68967615 + (CAA)n Simple_repeat Simple_repeat 1 21 0 4558 158 32 23 chr20 3186267 3186462 -68967420 + L1 LINE L1 6169 6387 -821 2509 73 7 3 chr20 3186462 3186765 -68967117 + AluSg SINE Alu 1 304 -6 4558 158 32 23 chr20 3186765 3186808 -68967074 + L1 LINE L1 6387 6428 -780 661 147 0 0 chr20 3186809 3186911 -68966971 + FRAM SINE Alu 62 163 -13 2389 80 0 10 chr20 3186911 3187213 -68966669 + AluY SINE Alu 1 299 -12 4587 63 4 0 chr20 3187217 3187756 -68966126 + SVA Other Other 839 1379 -7 500 111 9 10 chr20 3187760 3187883 -68965999 + L1M1 LINE L1 5315 5440 -851 1887 144 14 7 chr20 3187883 3188175 -68965707 + AluSx SINE Alu 1 294 -18 1047 140 67 0 chr20 3188176 3188340 -68965542 + AluJb SINE Alu 133 307 -5 799 248 124 28 chr20 3188340 3188365 -68965517 + L1ME1 LINE L1 5804 5825 -341 4069 117 21 44 chr20 3188365 3189072 -68964810 - LTR8 LTR ERV1 0 691 1 799 248 124 28 chr20 3189072 3189368 -68964514 + L1ME1 LINE L1 5825 6156 -10 771 233 96 27 chr20 3189504 3189577 -68964305 + L2 LINE L2 2140 2207 -1107 2274 109 10 0 chr20 3189577 3189880 -68964002 + AluSp SINE Alu 1 306 -7 771 233 96 27 chr20 3189880 3190098 -68963784 + L2 LINE L2 2207 2451 -863 2269 114 0 3 chr20 3190098 3190406 -68963476 - AluSx SINE Alu -5 307 1 1020 151 13 0 chr20 3190414 3190566 -68963316 - AluSg/x SINE Alu -22 288 135 1057 221 223 7 chr20 3190567 3190757 -68963125 + L2 LINE L2 2439 2587 -727 2386 75 3 3 chr20 3190757 3191052 -68962830 - AluY SINE Alu -14 297 3 1057 221 223 7 chr20 3191052 3191287 -68962595 + L2 LINE L2 2587 2956 -358 237 217 0 22 chr20 3191298 3191344 -68962538 + MLT1E1 LTR MaLR 7 51 -573 1754 95 95 39 chr20 3191414 3191697 -68962185 - AluSx SINE Alu -13 299 1 287 161 0 0 chr20 3191698 3191754 -68962128 + Alu SINE Alu 243 298 -4 700 203 203 42 chr20 3191825 3192200 -68961682 + MLT1E1 LTR MaLR 123 562 -31 2016 153 0 10 chr20 3192200 3192508 -68961374 - AluJo SINE Alu -7 305 1 700 203 203 42 chr20 3192508 3192543 -68961339 + MLT1E1 LTR MaLR 562 590 -3 317 230 59 134 chr20 3192574 3192813 -68961069 + L2 LINE L2 3028 3248 -65 1164 249 143 5 chr20 3193310 3193687 -68960195 - LTR16A LTR ERVL -3 447 19 1578 96 5 36 chr20 3193796 3194016 -68959866 - AluSg/x SINE Alu -17 295 83 1099 232 51 40 chr20 3194041 3194092 -68959790 - Charlie4a DNA MER1_type -1534 427 378 2269 94 0 17 chr20 3194092 3194389 -68959493 + AluSx SINE Alu 1 292 -20 1099 232 51 40 chr20 3194389 3194428 -68959454 - Charlie4a DNA MER1_type -1583 378 341 2067 129 0 26 chr20 3194428 3194731 -68959151 - AluJo SINE Alu -17 295 1 1099 232 51 40 chr20 3194731 3195014 -68958868 - Charlie4a DNA MER1_type -1620 341 49 2758 107 76 127 chr20 3197158 3197200 -68956682 - MER4A LTR ERV1 -1 663 620 2217 125 0 0 chr20 3197200 3197495 -68956387 - AluSq SINE Alu -18 295 1 2758 107 76 127 chr20 3197495 3197527 -68956355 - MER4A LTR ERV1 -44 620 588 2078 134 3 7 chr20 3197527 3197832 -68956050 + AluSq SINE Alu 1 304 -9 2758 107 76 127 chr20 3197832 3197886 -68955996 - MER4A LTR ERV1 -76 588 533 2324 94 0 27 chr20 3197886 3198184 -68955698 - AluSg SINE Alu -20 290 1 2758 107 76 127 chr20 3198184 3198752 -68955130 - MER4A LTR ERV1 -131 533 1 509 257 42 0 chr20 3199056 3199200 -68954682 + L1ME3A LINE L1 5994 6143 -27 737 211 51 6 chr20 3199206 3199381 -68954501 - MER2 DNA MER2_type 0 345 163 1959 141 10 16 chr20 3199381 3199685 -68954197 - AluSx SINE Alu -10 302 1 1751 147 26 46 chr20 3200290 3200596 -68953286 + AluSx SINE Alu 1 300 -12 237 289 72 77 chr20 3200669 3200863 -68953019 - MLT1J2 LTR MaLR -4 446 254 1100 150 0 0 chr20 3200972 3201132 -68952750 + AluSp SINE Alu 137 296 -17 266 311 14 0 chr20 3201152 3201226 -68952656 - MLT1J2 LTR MaLR -309 141 67 2236 77 0 119 chr20 3201232 3201584 -68952298 - AluSx SINE Alu -1 311 2 1133 224 148 84 chr20 3201610 3202110 -68951772 + MLT1H LTR MaLR 1 532 -17 2433 84 0 6 chr20 3202692 3203003 -68950879 - AluY SINE Alu -2 309 1 335 326 158 9 chr20 3203098 3203319 -68950563 + L1MEc LINE L1 38 291 -6105 1804 219 60 9 chr20 3203370 3203922 -68949960 + L1M4 LINE L1 4216 4795 -1351 820 210 0 56 chr20 3203903 3204098 -68949784 + AluJo SINE Alu 117 300 -12 * 240 200 0 0 chr20 3204098 3204143 -68949739 + L1M4 LINE L1 4800 4844 -1302 1361 127 104 0 chr20 3204143 3204363 -68949519 - AluSx SINE Alu -69 243 1 32 0 0 0 chr20 3204412 3204444 -68949438 + AT_rich Low_complexity Low_complexity 1 32 0 283 324 6 40 chr20 3205317 3205490 -68948392 + G-rich Low_complexity Low_complexity 3 169 0 233 243 66 22 chr20 3206058 3206194 -68947688 + (TCTCTG)n Simple_repeat Simple_repeat 2 143 0 22 56 0 0 chr20 3206849 3206885 -68946997 + GC_rich Low_complexity Low_complexity 1 36 0 257 111 0 0 chr20 3207784 3207820 -68946062 + tRNA-Arg-AGA tRNA tRNA 1 36 -40 489 321 21 26 chr20 3209978 3210171 -68943711 + MIR SINE MIR 24 215 -47 484 194 194 0 chr20 3210171 3210269 -68943613 + AluJo/FLAM SINE Alu 2 118 -184 2312 90 0 3 chr20 3210269 3210570 -68943312 - AluSx SINE Alu -12 300 1 28 35 0 35 chr20 3210577 3210602 -68943280 + AT_rich Low_complexity Low_complexity 1 25 -30 2004 114 7 7 chr20 3210602 3210891 -68942991 - AluSg SINE Alu -21 289 1 28 35 0 35 chr20 3210891 3210922 -68942960 + AT_rich Low_complexity Low_complexity 25 55 0 1651 155 54 0 chr20 3210934 3211211 -68942671 + AluJb SINE Alu 1 292 -20 2356 56 0 30 chr20 3211237 3211541 -68942341 + AluY SINE Alu 1 295 -16 2280 101 0 0 chr20 3211595 3211901 -68941981 - AluSq SINE Alu -7 306 1 187 355 91 21 chr20 3212298 3212484 -68941398 + L2 LINE L2 1175 1373 -1941 399 300 108 31 chr20 3212498 3212721 -68941161 - HAL1 LINE L1 -245 2262 2023 297 0 0 0 chr20 3212735 3212768 -68941114 + (TTTTTG)n Simple_repeat Simple_repeat 2 34 0 1539 271 72 35 chr20 3212811 3212914 -68940968 + L2 LINE L2 1824 1922 -1392 2414 74 0 6 chr20 3212914 3213226 -68940656 + AluSg SINE Alu 1 310 0 1539 271 72 35 chr20 3213226 3213295 -68940587 + L2 LINE L2 1922 1987 -1327 2487 53 0 0 chr20 3213295 3213598 -68940284 - AluY SINE Alu -8 303 1 1539 271 72 35 chr20 3213598 3214062 -68939820 + L2 LINE L2 1987 2485 -829 383 320 138 52 chr20 3214101 3214463 -68939419 + L2 LINE L2 2920 3312 -1 214 250 33 0 chr20 3214465 3214525 -68939357 + MIR SINE MIR 43 104 -104 892 149 0 8 chr20 3214849 3215023 -68938859 - FLAM_C SINE Alu 0 173 1 1880 135 36 7 chr20 3215059 3215362 -68938520 - AluJb SINE Alu 0 312 1 1714 92 0 0 chr20 3215424 3215652 -68938230 - AluSq SINE Alu -80 233 6 2245 75 0 14 chr20 3215956 3216249 -68937633 + AluSg SINE Alu 1 289 -21 2454 62 0 0 chr20 3217532 3217837 -68936045 + AluSq SINE Alu 1 305 -8 806 204 63 45 chr20 3217841 3218062 -68935820 - MIR SINE MIR -30 232 8 1644 143 6 117 chr20 3218081 3218439 -68935443 + 7SLRNA srpRNA srpRNA 1 318 -2 858 215 0 0 chr20 3218441 3218604 -68935278 + AluJo/FRAM SINE Alu 140 302 0 223 304 24 56 chr20 3219079 3219204 -68934678 - MIR SINE MIR -64 144 24 193 244 171 0 chr20 3219301 3219424 -68934458 + L2 LINE L2 2715 2858 -456 2018 136 3 3 chr20 3219512 3219813 -68934069 - AluSx SINE Alu -11 301 1 1809 151 3 10 chr20 3219907 3220205 -68933677 - AluSx SINE Alu -1 311 16 1610 173 21 21 chr20 3220211 3220500 -68933382 - AluJo SINE Alu -22 290 2 861 142 122 146 chr20 3220613 3220756 -68933126 - AluJo SINE Alu -6 306 161 2168 82 27 0 chr20 3220756 3221048 -68932834 - AluSp SINE Alu -13 300 1 2151 85 44 0 chr20 3221056 3221350 -68932532 - AluSg SINE Alu -3 307 1 2346 73 0 7 chr20 3221359 3221659 -68932223 - AluY SINE Alu -13 298 1 861 142 122 146 chr20 3221659 3221743 -68932139 - AluJo SINE Alu -166 146 66 2029 147 0 0 chr20 3221931 3222238 -68931644 + AluSx SINE Alu 2 308 -4 408 293 78 29 chr20 3222393 3222598 -68931284 - ERVL LTR ERVL -3157 2607 2393 1665 147 43 14 chr20 3222686 3222809 -68931073 + AluSq SINE Alu 14 132 -181 1947 123 45 0 chr20 3222809 3223101 -68930781 + AluY SINE Alu 1 305 -6 1665 147 43 14 chr20 3223101 3223256 -68930626 + AluSq SINE Alu 132 300 -13 2167 118 3 0 chr20 3223290 3223595 -68930287 - AluSx SINE Alu -6 306 1 962 159 0 25 chr20 3223595 3223758 -68930124 - AluJb SINE Alu -12 300 142 2074 91 0 14 chr20 3223765 3224051 -68929831 - AluSp SINE Alu -14 299 18 331 332 61 37 chr20 3224062 3224276 -68929606 - LTR16A1 LTR ERVL -235 222 4 1574 150 117 0 chr20 3224511 3224777 -68929105 - AluJo SINE Alu -15 297 1 1280 262 138 27 chr20 3225174 3225458 -68928424 - MLT1G LTR MaLR 0 590 339 2008 99 58 0 chr20 3225458 3225750 -68928132 - AluSq SINE Alu -4 309 1 1280 262 138 27 chr20 3225750 3225988 -68927894 - MLT1G LTR MaLR -251 339 10 216 250 73 0 chr20 3227386 3227454 -68926428 + MIR SINE MIR 177 249 -13 1108 246 62 0 chr20 3227695 3228004 -68925878 - L1MC/D LINE L1 -2153 5655 5328 237 119 0 0 chr20 3228112 3228154 -68925728 - AluJb SINE Alu -5 297 256 713 58 11 0 chr20 3228154 3228241 -68925641 - AluSq/x SINE Alu -193 119 32 1640 151 0 0 chr20 3228241 3228493 -68925389 - AluJb SINE Alu -60 252 1 2156 100 3 0 chr20 3228566 3228866 -68925016 - AluSx SINE Alu -11 301 1 248 308 105 15 chr20 3228961 3229094 -68924788 - L1MC/D LINE L1 -1217 4929 4785 2126 88 13 29 chr20 3229178 3229485 -68924397 - AluSq SINE Alu -11 302 1 424 181 0 0 chr20 3230021 3230093 -68923789 + MER3 DNA MER1_type 1 72 -137 538 184 18 0 chr20 3230100 3230214 -68923668 + Ricksha DNA DNA 8 123 -3123 354 155 0 48 chr20 3230198 3230282 -68923600 - Ricksha DNA DNA -1463 1783 1704 * 686 120 0 26 chr20 3230261 3230378 -68923504 - Ricksha DNA DNA -3131 115 2 653 193 89 0 chr20 3230378 3230513 -68923369 + MER3 DNA MER1_type 63 209 0 2227 101 0 0 chr20 3232022 3232318 -68921564 - AluSx SINE Alu -16 296 1 218 232 0 36 chr20 3232499 3232555 -68921327 + L3 LINE CR1 441 494 -1083 1838 144 45 0 chr20 3232574 3232865 -68921017 + AluJo SINE Alu 1 304 -8 919 114 0 0 chr20 3234636 3234767 -68919115 + FLAM_C SINE Alu 11 141 -2 239 327 215 5 chr20 3235271 3235795 -68918087 + L2 LINE L2 2624 3267 -5 243 217 0 0 chr20 3236034 3236094 -68917788 + GA-rich Low_complexity Low_complexity 1 60 0 2116 96 0 39 chr20 3236582 3236894 -68916988 + AluSx SINE Alu 1 300 -12 1958 110 0 73 chr20 3236902 3237230 -68916652 + AluSx SINE Alu 1 304 -8 249 349 146 29 chr20 3237249 3237764 -68916118 - L2 LINE L2 -470 2844 2208 2190 120 0 0 chr20 3237764 3238065 -68915817 + AluSq SINE Alu 3 303 -10 249 349 146 29 chr20 3238065 3238315 -68915567 - L2 LINE L2 -1106 2208 1989 2233 87 3 3 chr20 3238578 3238888 -68914994 + AluSg SINE Alu 1 310 0 2077 80 27 23 chr20 3239664 3239965 -68913917 - AluSc SINE Alu -7 302 1 2180 121 0 0 chr20 3240724 3241022 -68912860 + AluSx SINE Alu 1 298 -14 369 0 0 0 chr20 3241198 3241239 -68912643 + (CA)n Simple_repeat Simple_repeat 1 41 0 1828 148 3 3 chr20 3241312 3241617 -68912265 + AluSx SINE Alu 1 305 -7 2294 97 0 0 chr20 3241620 3241929 -68911953 + AluSx SINE Alu 1 309 -3 823 178 74 18 chr20 3241929 3242092 -68911790 + AluSg/x SINE Alu 132 303 -7 1923 149 3 0 chr20 3242101 3242397 -68911485 + AluSx SINE Alu 1 297 -15 2366 66 0 7 chr20 3242399 3242700 -68911182 + AluY SINE Alu 1 299 -12 1022 184 0 0 chr20 3242700 3242874 -68911008 + AluSg/x SINE Alu 132 305 -5 1387 211 88 76 chr20 3243007 3243452 -68910430 + MLT1E LTR MaLR 117 592 -1 2084 117 3 3 chr20 3243482 3243780 -68910102 + AluSx SINE Alu 1 298 -14 2096 101 20 3 chr20 3243982 3244278 -68909604 + AluSc SINE Alu 1 301 -8 2231 94 7 0 chr20 3244278 3244574 -68909308 + AluY SINE Alu 1 299 -12 681 162 15 66 chr20 3246713 3246849 -68907033 + FLAM_A SINE Alu 1 129 -4 1588 155 23 58 chr20 3247816 3248125 -68905757 + AluJo SINE Alu 1 298 -14 6076 105 74 35 chr20 3248126 3250439 -68903443 + SVA Other Other 30 1386 0 433 209 0 18 chr20 3250443 3250613 -68903269 + GA-rich Low_complexity Low_complexity 1 166 0 2356 91 0 0 chr20 3250664 3250973 -68902909 + AluSq SINE Alu 1 309 -4 1302 229 85 21 chr20 3251227 3251691 -68902191 + MER20B DNA MER1_type 111 648 -135 1809 173 7 3 chr20 3252490 3252797 -68901085 + AluJo SINE Alu 1 308 -4 22 0 0 0 chr20 3253780 3253802 -68900080 + AT_rich Low_complexity Low_complexity 1 22 0 1679 151 47 25 chr20 3253859 3254137 -68899745 + AluJo SINE Alu 2 336 0 418 39 0 0 chr20 3254137 3254188 -68899694 + (TAAA)n Simple_repeat Simple_repeat 2 180 0 1037 201 6 0 chr20 3254245 3254419 -68899463 - FAM SINE Alu 0 175 1 909 296 132 46 chr20 3254543 3254860 -68899022 - L1M4 LINE L1 -1751 4395 4107 2295 111 3 0 chr20 3254860 3255157 -68898725 + AluSg SINE Alu 1 298 -12 909 296 132 46 chr20 3255157 3255444 -68898438 - L1M4 LINE L1 -2039 4107 3739 190 278 167 0 chr20 3255463 3255517 -68898365 - L2 LINE L2 -17 3255 3193 644 93 70 195 chr20 3255525 3255637 -68898245 + L1MC2 LINE L1 6036 6160 -184 2336 99 3 0 chr20 3255637 3255940 -68897942 + AluSx SINE Alu 1 304 -8 2077 125 0 3 chr20 3255940 3256254 -68897628 + AluSx SINE Alu 3 312 0 644 93 70 195 chr20 3256254 3256355 -68897527 + L1MC2 LINE L1 6158 6223 -121 226 154 19 0 chr20 3256365 3256417 -68897465 + L1MC2 LINE L1 6282 6334 -10 2158 115 7 3 chr20 3256452 3256748 -68897134 + AluSx SINE Alu 6 302 -10 826 157 22 8 chr20 3256749 3256883 -68896999 + AluJo SINE Alu 1 136 -176 252 235 73 0 chr20 3257486 3257554 -68896328 - L1MC4 LINE L1 -41 8001 7929 1810 140 0 56 chr20 3257646 3257967 -68895915 - AluJb SINE Alu -9 303 1 567 276 104 37 chr20 3258018 3258286 -68895596 - L1ME4a LINE L1 -158 5963 5678 770 114 0 0 chr20 3258383 3258488 -68895394 + AluSg/x SINE Alu 198 302 -10 2371 76 3 20 chr20 3258488 3258790 -68895092 + AluSq SINE Alu 1 297 -16 24 0 0 0 chr20 3259048 3259072 -68894810 + AT_rich Low_complexity Low_complexity 1 24 0 671 195 98 102 chr20 3259467 3259723 -68894159 - MER112 DNA MER1_type -1 255 1 263 224 0 40 chr20 3259729 3259805 -68894077 + L1MD2 LINE L1 6180 6252 -107 481 111 0 0 chr20 3259805 3259868 -68894014 + AluS SINE Alu 1 63 -255 225 204 0 0 chr20 3260117 3260161 -68893721 + T-rich Low_complexity Low_complexity 1 44 0 2296 122 0 3 chr20 3260254 3260565 -68893317 - AluSx SINE Alu -2 310 1 2289 104 0 0 chr20 3260577 3260865 -68893017 - AluY SINE Alu -23 288 1 1980 143 11 0 chr20 3260869 3261155 -68892727 - AluSx SINE Alu -23 289 1 999 224 102 14 chr20 3261181 3261260 -68892622 - L1MD2 LINE L1 -8 6351 6280 1748 82 55 0 chr20 3261260 3261479 -68892403 - AluSq SINE Alu -82 231 1 999 224 102 14 chr20 3261479 3261694 -68892188 - L1MD2 LINE L1 -79 6280 6031 2140 120 7 13 chr20 3261901 3262201 -68891681 + AluSx SINE Alu 1 298 -14 442 267 99 0 chr20 3262499 3262600 -68891282 + MER81 DNA DNA 3 113 -1 2102 103 0 75 chr20 3263272 3263624 -68890258 - AluSq SINE Alu 0 313 1 2140 134 0 0 chr20 3263626 3263918 -68889964 - AluSg SINE Alu -18 292 1 2426 97 0 22 chr20 3263918 3264237 -68889645 - AluSx SINE Alu 0 312 1 1094 143 6 6 chr20 3264621 3264796 -68889086 - L1PA16 LINE L1 -1 6165 5991 2430 99 0 0 chr20 3264827 3265129 -68888753 - AluSx SINE Alu -10 302 1 241 178 22 144 chr20 3265245 3265279 -68888603 + L1M4 LINE L1 3959 3996 -2150 2286 101 13 7 chr20 3265279 3265585 -68888297 + AluSp SINE Alu 4 311 -2 241 178 22 144 chr20 3265585 3265640 -68888242 + L1M4 LINE L1 3996 4037 -2109 1732 166 7 7 chr20 3265641 3265918 -68887964 + AluJo SINE Alu 1 277 -35 240 35 0 0 chr20 3265918 3265947 -68887935 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 840 143 14 14 chr20 3265950 3266090 -68887792 + AluJb SINE Alu 165 304 -8 2166 105 0 23 chr20 3266100 3266229 -68887653 + AluSx SINE Alu 11 141 -171 2246 118 0 10 chr20 3266229 3266534 -68887348 + AluSx SINE Alu 1 302 -10 2166 105 0 23 chr20 3266534 3266708 -68887174 + AluSx SINE Alu 141 307 -5 2948 171 85 154 chr20 3266718 3267008 -68886874 + L1M4 LINE L1 4033 4341 -1805 2000 136 27 13 chr20 3267008 3267309 -68886573 - AluSx SINE Alu -4 308 4 2948 171 85 154 chr20 3267309 3267428 -68886454 + L1M4 LINE L1 4341 4467 -1679 2302 82 7 3 chr20 3267428 3267720 -68886162 + AluSg1 SINE Alu 5 297 -12 1168 153 6 0 chr20 3267720 3267897 -68885985 + AluJo/FRAM SINE Alu 134 311 -1 2948 171 85 154 chr20 3267897 3268609 -68885273 + L1M4 LINE L1 4465 5242 -904 1505 176 85 4 chr20 3269071 3269343 -68884539 - AluJb SINE Alu -18 294 1 1835 179 13 0 chr20 3269343 3269645 -68884237 - AluJb SINE Alu -5 307 2 2156 125 0 0 chr20 3269674 3269970 -68883912 + AluSx SINE Alu 1 296 -16 2284 110 3 25 chr20 3269970 3270289 -68883593 + AluSx SINE Alu 1 312 0 2223 113 0 7 chr20 3273645 3273945 -68879937 + AluSx SINE Alu 1 298 -14 1373 183 97 25 chr20 3274796 3274958 -68878924 - AluJb SINE Alu -13 299 150 285 51 0 0 chr20 3274958 3274997 -68878885 + (TG)n Simple_repeat Simple_repeat 1 39 0 1373 183 97 25 chr20 3274997 3275113 -68878769 - AluJb SINE Alu -162 150 1 929 246 42 0 chr20 3275159 3275374 -68878508 + MER58A DNA MER1_type 1 224 0 668 137 11 0 chr20 3275429 3275524 -68878358 + FLAM_C SINE Alu 13 108 -35 196 51 26 26 chr20 3275531 3275570 -68878312 + (TAAAA)n Simple_repeat Simple_repeat 2 40 0 2290 107 13 7 chr20 3275733 3276043 -68877839 + AluSx SINE Alu 1 312 0 2067 98 0 73 chr20 3276109 3276424 -68877458 + AluSg SINE Alu 1 292 -18 2137 123 14 0 chr20 3276536 3276828 -68877054 + AluSx SINE Alu 1 296 -16 28 48 0 0 chr20 3277029 3277071 -68876811 + AT_rich Low_complexity Low_complexity 1 42 0 477 260 81 60 chr20 3277233 3277468 -68876414 - MIR SINE MIR -3 259 20 322 200 0 17 chr20 3277580 3277640 -68876242 + MIR3 SINE MIR 145 203 -5 1387 151 17 25 chr20 3277657 3277895 -68875987 - MER46A DNA MER2_type 0 236 1 758 236 149 65 chr20 3278022 3278310 -68875572 + HAL1 LINE L1 1745 2008 -499 1538 221 30 3 chr20 3278310 3278608 -68875274 + AluJb SINE Alu 1 306 -6 758 236 149 65 chr20 3278608 3278810 -68875072 + HAL1 LINE L1 2008 2276 -231 1211 144 0 0 chr20 3278812 3278993 -68874889 + AluSg/x SINE Alu 130 310 0 967 112 0 0 chr20 3279033 3279158 -68874724 + AluSq/x SINE Alu 12 136 -177 2165 112 3 3 chr20 3279158 3279452 -68874430 + AluSq SINE Alu 1 294 -19 319 235 0 0 chr20 3279482 3279550 -68874332 + HAL1 LINE L1 2440 2507 0 2194 116 7 10 chr20 3280084 3280387 -68873495 - AluSx SINE Alu -10 302 1 740 173 16 0 chr20 3280891 3281018 -68872864 + FLAM_C SINE Alu 1 129 -4 1509 104 5 205 chr20 3281806 3282181 -68871701 - AluJb SINE Alu -12 300 1 2319 60 0 3 chr20 3282363 3282684 -68871198 - AluY SINE Alu 0 320 1 451 252 0 9 chr20 3283210 3283317 -68870565 + MER5A DNA MER1_type 9 114 -75 323 296 42 49 chr20 3283371 3283513 -68870369 - MIR SINE MIR -78 184 44 2302 64 3 74 chr20 3283976 3284302 -68869580 + AluSx SINE Alu 3 305 -7 816 138 0 62 chr20 3284392 3284537 -68869345 - FLAM_C SINE Alu -7 136 1 1200 156 0 0 chr20 3284579 3284746 -68869136 - AluJb SINE Alu -16 296 130 1509 105 9 19 chr20 3284790 3285000 -68868882 + AluSg/x SINE Alu 72 279 -31 353 147 118 20 chr20 3285704 3285806 -68868076 + MLT1L LTR MaLR 168 279 -336 31 0 0 0 chr20 3286604 3286635 -68867247 + AT_rich Low_complexity Low_complexity 1 31 0 301 227 184 120 chr20 3289598 3289972 -68863910 + L1M2 LINE L1 654 1051 -5798 288 0 0 0 chr20 3291341 3291373 -68862509 + (CAGCT)n Simple_repeat Simple_repeat 3 34 0 239 322 20 26 chr20 3291761 3291913 -68861969 + MIR SINE MIR 24 174 -88 378 217 217 0 chr20 3293009 3293152 -68860730 - MER96 DNA MER1_type? -1 174 1 2120 136 3 7 chr20 3293507 3293815 -68860067 + AluSx SINE Alu 1 307 -5 2306 87 13 3 chr20 3294119 3294417 -68859465 + AluSx SINE Alu 2 302 -10 2149 126 0 10 chr20 3294423 3294732 -68859150 + AluSx SINE Alu 6 311 -1 1161 97 30 18 chr20 3295427 3295592 -68858290 + AluSg/x SINE Alu 135 301 -11 216 365 0 0 chr20 3296014 3296110 -68857772 + L2 LINE L2 2651 2746 -568 215 326 90 0 chr20 3296127 3296216 -68857666 + MIR SINE MIR 16 112 -96 25 65 0 0 chr20 3297440 3297486 -68856396 + GC_rich Low_complexity Low_complexity 1 46 0 326 249 216 25 chr20 3298868 3299109 -68854773 - HAL1b LINE L1 -626 722 436 2074 91 43 11 chr20 3299787 3300063 -68853819 - AluSg SINE Alu 0 310 26 189 0 0 0 chr20 3300108 3300129 -68853753 + (TTTTG)n Simple_repeat Simple_repeat 4 24 0 2039 121 17 3 chr20 3300174 3300464 -68853418 - AluSx SINE Alu -18 294 1 1794 171 3 20 chr20 3300569 3300705 -68853177 + AluJb SINE Alu 1 138 -174 2303 125 0 6 chr20 3300705 3301018 -68852864 + AluSx SINE Alu 1 311 -1 1794 171 3 20 chr20 3301018 3301186 -68852696 + AluJb SINE Alu 138 300 -12 250 320 0 0 chr20 3301284 3301381 -68852501 + L1 LINE L1 3609 3705 -2441 2028 150 3 7 chr20 3301603 3301910 -68851972 + AluSx SINE Alu 1 306 -6 244 258 0 0 chr20 3301920 3301982 -68851900 - L1MC/D LINE L1 -2254 5531 5470 2236 194 48 7 chr20 3301982 3302445 -68851437 - LTR53 LTR ERVL 0 519 38 1902 151 3 22 chr20 3302455 3302773 -68851109 - AluSq SINE Alu -1 312 1 548 263 74 47 chr20 3302786 3303122 -68850760 + L1MC4a LINE L1 5539 5816 -305 23 33 0 0 chr20 3303162 3303192 -68850690 + AT_rich Low_complexity Low_complexity 1 30 0 2302 110 0 19 chr20 3303225 3303534 -68850348 - AluSx SINE Alu -9 303 1 1266 157 52 30 chr20 3303686 3303916 -68849966 - AluJo SINE Alu -69 243 9 35 0 0 0 chr20 3304017 3304052 -68849830 + AT_rich Low_complexity Low_complexity 1 35 0 1788 192 57 65 chr20 3304073 3304578 -68849304 + MLT1D LTR MaLR 5 505 0 2275 94 11 0 chr20 3304676 3304962 -68848920 + AluSx SINE Alu 1 289 -23 606 28 0 0 chr20 3304963 3305035 -68848847 + (TAGA)n Simple_repeat Simple_repeat 2 73 0 21 36 0 0 chr20 3305035 3305063 -68848819 + AT_rich Low_complexity Low_complexity 1 28 0 2233 102 3 0 chr20 3305492 3305795 -68848087 - AluSx SINE Alu -8 304 1 2172 97 0 34 chr20 3305850 3306198 -68847684 + AluSx SINE Alu 1 312 0 1939 123 10 10 chr20 3306486 3306778 -68847104 - AluJb SINE Alu -17 295 4 1242 118 14 59 chr20 3306790 3306827 -68847055 + AluSg/x SINE Alu 98 135 -177 2138 110 0 7 chr20 3306827 3307126 -68846756 + AluSp SINE Alu 1 297 -16 1242 118 14 59 chr20 3307126 3307309 -68846573 + AluSg/x SINE Alu 135 308 -4 485 304 149 0 chr20 3307914 3308128 -68845754 - MER112 DNA MER1_type -9 251 6 2419 50 0 3 chr20 3308635 3308932 -68844950 + AluY SINE Alu 1 296 -15 1719 151 7 43 chr20 3309104 3309409 -68844473 + AluJo SINE Alu 1 294 -18 1799 162 3 3 chr20 3309632 3309928 -68843954 + AluJb SINE Alu 1 296 -16 2337 89 0 6 chr20 3309928 3310241 -68843641 + AluY SINE Alu 1 311 0 304 114 0 0 chr20 3310576 3310620 -68843262 + Alu SINE Alu 1 44 -255 1543 76 22 31 chr20 3310620 3310843 -68843039 + AluSg/x SINE Alu 90 310 0 2245 88 7 3 chr20 3310891 3311198 -68842684 + AluSg SINE Alu 1 308 -2 2396 61 0 0 chr20 3311200 3311532 -68842350 + AluY SINE Alu 1 311 0 1938 134 0 3 chr20 3311662 3311952 -68841930 + AluSx SINE Alu 1 289 -23 1944 123 14 0 chr20 3311984 3312277 -68841605 + AluSx SINE Alu 1 297 -15 2103 81 42 0 chr20 3312364 3312648 -68841234 + AluSx SINE Alu 1 296 -16 533 186 143 56 chr20 3313107 3313268 -68840614 - MER5B DNA MER1_type -3 175 1 255 31 0 0 chr20 3315883 3315915 -68837967 + (CA)n Simple_repeat Simple_repeat 2 33 0 321 283 83 0 chr20 3316189 3316309 -68837573 - L2 LINE L2 -21 3251 3122 482 188 0 0 chr20 3316981 3317061 -68836821 + FRAM/FAM SINE Alu 1 73 -103 2267 97 0 0 chr20 3317281 3317579 -68836303 - AluSx SINE Alu -12 300 3 210 280 236 43 chr20 3319534 3320191 -68833691 + L2 LINE L2 1706 2489 -825 2408 50 0 13 chr20 3320306 3320608 -68833274 + AluY SINE Alu 1 298 -13 1860 174 144 104 chr20 3320616 3320851 -68833031 + L1MC3 LINE L1 6784 7008 -777 2369 88 0 0 chr20 3320851 3321159 -68832723 + AluSx SINE Alu 1 308 -4 1860 174 144 104 chr20 3321159 3321236 -68832646 + L1MC3 LINE L1 7008 7081 -704 246 241 0 0 chr20 3321236 3321290 -68832592 + MLT1F1 LTR MaLR 62 115 -452 1860 174 144 104 chr20 3321290 3321558 -68832324 + L1MC3 LINE L1 7081 7447 -338 1949 134 27 0 chr20 3321558 3321850 -68832032 + AluSx SINE Alu 1 300 -12 1860 174 144 104 chr20 3321850 3321874 -68832008 + L1MC3 LINE L1 7447 7469 -316 887 119 119 25 chr20 3321877 3322036 -68831846 + FRAM SINE Alu 1 171 -5 2139 102 7 0 chr20 3322036 3322330 -68831552 + AluSc SINE Alu 1 296 -13 2329 96 3 0 chr20 3322330 3322641 -68831241 + AluSp SINE Alu 1 313 0 863 202 37 49 chr20 3322642 3322770 -68831112 + L1MC3 LINE L1 6144 6272 -1513 1624 178 0 41 chr20 3322770 3323085 -68830797 + AluJb SINE Alu 1 302 -10 863 202 37 49 chr20 3323085 3323208 -68830674 + L1MC3 LINE L1 6272 7703 -82 188 214 71 102 chr20 3323536 3323634 -68830248 + L2 LINE L2 2763 2857 -457 263 228 89 40 chr20 3323637 3323738 -68830144 + LTR16A1 LTR ERVL 332 437 -20 2325 65 0 19 chr20 3324606 3324739 -68829143 + AluY SINE Alu 1 135 -176 2209 114 0 0 chr20 3324739 3325045 -68828837 + AluY SINE Alu 1 306 -5 2325 65 0 19 chr20 3325045 3325220 -68828662 + AluY SINE Alu 135 303 -8 1002 112 0 106 chr20 3325220 3325408 -68828474 + AluY SINE Alu 133 300 -11 2291 77 0 16 chr20 3325560 3325872 -68828010 - AluY SINE Alu -4 307 1 2053 74 88 0 chr20 3325881 3326164 -68827718 - AluY SINE Alu -3 308 1 2322 45 14 3 chr20 3328771 3329058 -68824824 - AluSg SINE Alu -18 292 3 207 0 0 0 chr20 3329227 3329250 -68824632 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 186 43 0 0 chr20 3329254 3329277 -68824605 + (GGGGA)n Simple_repeat Simple_repeat 1 23 0 1682 158 37 3 chr20 3329339 3329637 -68824245 + AluJb SINE Alu 1 308 -4 2092 134 0 3 chr20 3329683 3329996 -68823886 + AluSx SINE Alu 1 312 0 2230 102 3 0 chr20 3330017 3330322 -68823560 + AluSx SINE Alu 1 306 -6 1856 151 0 43 chr20 3330322 3330459 -68823423 + AluSx SINE Alu 2 143 -169 2370 71 7 3 chr20 3330459 3330767 -68823115 + AluY SINE Alu 1 309 -2 1856 151 0 43 chr20 3330767 3330954 -68822928 + AluSx SINE Alu 143 312 0 1451 154 8 8 chr20 3330997 3331244 -68822638 - AluJb SINE Alu -8 304 58 2020 112 0 3 chr20 3331322 3331630 -68822252 + AluSx SINE Alu 1 307 0 2092 116 0 3 chr20 3331632 3331934 -68821948 + AluSg SINE Alu 8 308 -2 1850 127 14 14 chr20 3332289 3332580 -68821302 - AluSp SINE Alu -16 297 7 230 263 0 18 chr20 3332581 3332638 -68821244 - MER5A DNA MER1_type -6 183 128 186 315 22 43 chr20 3333989 3334081 -68819801 + MIR SINE MIR 118 207 -55 193 191 0 0 chr20 3388289 3388331 -68765551 - MIR SINE MIR -89 119 78 358 152 16 64 chr20 3388490 3388584 -68765298 - MIR SINE MIR -74 188 102 220 301 187 28 chr20 3389257 3389546 -68764336 - L2 LINE L2 -719 2595 2261 2275 53 3 0 chr20 3389849 3390155 -68763727 + AluY SINE Alu 1 307 0 2167 92 3 3 chr20 3390174 3390477 -68763405 + AluSg SINE Alu 1 303 -7 234 205 181 24 chr20 3390735 3390818 -68763064 - MIR SINE MIR -15 247 152 1752 165 0 3 chr20 3391289 3391592 -68762290 + AluJb SINE Alu 5 306 -6 426 278 105 23 chr20 3391651 3391784 -68762098 - MIR SINE MIR -113 149 6 2245 94 0 3 chr20 3392001 3392300 -68761582 + AluSq SINE Alu 3 300 -13 224 233 0 0 chr20 3392417 3392460 -68761422 + L2 LINE L2 3180 3222 -91 224 233 0 0 chr20 3392494 3392537 -68761345 + L2 LINE L2 3180 3222 -91 221 219 0 0 chr20 3392571 3392612 -68761270 + L2 LINE L2 3180 3220 -93 240 209 0 0 chr20 3392648 3392691 -68761191 + L2 LINE L2 3180 3222 -91 240 209 0 0 chr20 3392725 3392768 -68761114 + L2 LINE L2 3180 3222 -91 224 233 0 0 chr20 3392802 3392845 -68761037 + L2 LINE L2 3180 3222 -91 240 209 0 0 chr20 3392879 3392922 -68760960 + L2 LINE L2 3180 3222 -91 224 233 0 0 chr20 3392956 3392999 -68760883 + L2 LINE L2 3180 3222 -91 307 181 25 188 chr20 3393033 3393193 -68760689 + L2 LINE L2 3180 3313 0 185 319 104 39 chr20 3393211 3393471 -68760411 + L2 LINE L2 2196 2472 -842 3266 72 54 39 chr20 3393636 3394119 -68759763 + L1PA7 LINE L1 5664 6153 -1 1381 175 130 0 chr20 3394344 3394613 -68759269 - AluJo SINE Alu -8 304 1 391 354 52 68 chr20 3394647 3395011 -68758871 - L2 LINE L2 -4 3268 2911 1800 212 67 25 chr20 3395011 3395459 -68758423 - MLT1C LTR MaLR 0 467 1 391 354 52 68 chr20 3395459 3395535 -68758347 - L2 LINE L2 -361 2911 2835 419 301 93 82 chr20 3395598 3396027 -68757855 + MLT1K LTR MaLR 155 588 0 242 128 0 0 chr20 3396058 3396097 -68757785 - MLT1A2 LTR MaLR -4 370 332 1459 181 14 31 chr20 3396778 3397066 -68756816 - AluJo SINE Alu -27 285 3 201 74 0 0 chr20 3397209 3397236 -68756646 + (T)n Simple_repeat Simple_repeat 1 27 0 25 112 0 0 chr20 3397481 3397597 -68756285 + AT_rich Low_complexity Low_complexity 1 116 0 308 224 58 71 chr20 3398629 3398775 -68755107 - L1ME LINE L1 -311 5842 5684 1614 187 3 3 chr20 3398775 3399069 -68754813 - AluJb SINE Alu -18 294 1 308 224 58 71 chr20 3399069 3399126 -68754756 - L1ME LINE L1 -469 5684 5628 245 239 65 84 chr20 3399126 3399389 -68754493 - Charlie2 DNA MER1_type -1 2861 2604 1739 182 3 3 chr20 3399389 3399696 -68754186 + AluJo SINE Alu 1 307 -5 560 329 32 16 chr20 3399719 3399968 -68753914 - L1ME LINE L1 -1008 5121 4869 390 280 51 81 chr20 3400050 3400286 -68753596 - L1ME LINE L1 -1517 4612 4384 351 0 0 0 chr20 3400332 3400371 -68753511 + (TTA)n Simple_repeat Simple_repeat 2 40 0 460 269 117 59 chr20 3400577 3400833 -68753049 - L1ME LINE L1 -1820 4309 4039 370 260 26 52 chr20 3400867 3401033 -68752849 - L1ME LINE L1 -2248 3881 3719 2298 97 0 0 chr20 3401033 3401342 -68752540 - AluSg SINE Alu -1 309 1 370 260 26 52 chr20 3401342 3401367 -68752515 - L1ME LINE L1 -2410 3719 3695 324 291 66 18 chr20 3401384 3401601 -68752281 - L1ME LINE L1 -875 1615 1412 384 196 49 125 chr20 3401601 3401785 -68752097 - L1MC5 LINE L1 -48 7913 7744 1457 164 92 0 chr20 3401818 3402099 -68751783 - AluSx SINE Alu 0 312 6 1333 281 107 60 chr20 3402235 3402670 -68751212 - L1ME LINE L1 -4862 1257 844 1794 101 8 0 chr20 3402670 3402918 -68750964 - AluSg1 SINE Alu -24 285 36 1333 281 107 60 chr20 3402918 3403605 -68750277 - L1ME LINE L1 -5275 844 82 1475 260 62 61 chr20 3403620 3404369 -68749513 - L1M4 LINE L1 -984 5162 4409 2091 91 0 0 chr20 3404369 3404672 -68749210 - AluSx SINE Alu 0 314 12 1475 260 62 61 chr20 3404672 3404725 -68749157 - L1M4 LINE L1 -1737 4409 4358 697 271 160 46 chr20 3406575 3407074 -68746808 + L2 LINE L2 1698 2253 -1061 219 304 108 10 chr20 3407113 3407215 -68746667 + L2 LINE L2 2437 2548 -766 324 0 0 0 chr20 3407591 3407627 -68746255 + (TG)n Simple_repeat Simple_repeat 2 37 0 282 95 0 0 chr20 3408235 3408277 -68745605 + (GA)n Simple_repeat Simple_repeat 2 43 0 213 39 0 0 chr20 3408294 3408320 -68745562 + (CA)n Simple_repeat Simple_repeat 1 26 0 286 125 57 40 chr20 3408326 3408502 -68745380 + (TA)n Simple_repeat Simple_repeat 1 179 0 23 0 0 0 chr20 3408502 3408525 -68745357 + AT_rich Low_complexity Low_complexity 1 23 0 246 32 0 0 chr20 3408541 3408572 -68745310 + (TG)n Simple_repeat Simple_repeat 2 32 0 1622 179 3 27 chr20 3408586 3408883 -68744999 - AluJo SINE Alu -22 290 1 880 116 8 0 chr20 3408884 3409005 -68744877 - AluJo SINE Alu -178 134 13 184 330 135 69 chr20 3409364 3409743 -68744139 - L2 LINE L2 -50 3222 2819 192 322 58 58 chr20 3409784 3409958 -68743924 - L2 LINE L2 -570 2744 2571 262 321 28 9 chr20 3410127 3410233 -68743649 - L2 LINE L2 -1026 2288 2181 23 0 0 0 chr20 3410482 3410505 -68743377 + AT_rich Low_complexity Low_complexity 1 23 0 284 286 150 41 chr20 3410726 3410873 -68743009 - MER5B DNA MER1_type -15 163 1 559 249 128 48 chr20 3411071 3411484 -68742398 + L1MC4a LINE L1 5749 6194 -1614 14504 23 0 5 chr20 3411507 3413336 -68740546 - L1PA3 LINE L1 -2928 3218 1399 18095 28 1 2 chr20 3413336 3416268 -68737614 + L1PA3 LINE L1 3217 6151 -4 35 0 0 0 chr20 3416268 3416303 -68737579 + AT_rich Low_complexity Low_complexity 1 35 0 630 310 35 22 chr20 3416613 3416929 -68736953 + L1MC4a LINE L1 6495 6814 -994 394 291 40 84 chr20 3416943 3417194 -68736688 + L1MEd LINE L1 348 587 -5829 3363 211 73 70 chr20 3417682 3419817 -68734065 + L1MDb LINE L1 7 2009 -4397 1976 123 3 31 chr20 3419817 3420162 -68733720 + AluSq SINE Alu 1 337 0 3363 211 73 70 chr20 3420162 3420436 -68733446 + L1MDb LINE L1 2009 2281 -4125 2746 193 32 2 chr20 3420436 3420965 -68732917 + MLT2B3 LTR ERVL 2 546 -8 851 207 132 3 chr20 3420966 3421318 -68732564 + L1MDb LINE L1 2273 2672 -3734 1352 191 21 82 chr20 3421331 3421722 -68732160 + L1MD2 LINE L1 5971 6358 -1 359 140 0 110 chr20 3421721 3421764 -68732118 + L1MD3 LINE L1 7698 7725 -270 * 2186 124 0 3 chr20 3421764 3422070 -68731812 + AluSx SINE Alu 1 305 -7 359 140 0 110 chr20 3422070 3422126 -68731756 + L1MD3 LINE L1 7725 7786 -209 186 43 0 0 chr20 3422126 3422149 -68731733 + (CA)n Simple_repeat Simple_repeat 2 24 0 327 289 75 64 chr20 3422151 3422431 -68731451 + L1MEd LINE L1 1084 1366 -5050 495 53 0 160 chr20 3422432 3422526 -68731356 + MADE1 DNA Mariner 2 80 0 2277 81 7 17 chr20 3422547 3422845 -68731037 + AluSg1 SINE Alu 1 295 -14 236 35 0 0 chr20 3422857 3422886 -68730996 - MADE1 DNA Mariner -43 37 9 263 292 44 15 chr20 3422922 3423059 -68730823 + L1MEd LINE L1 1252 1392 -5034 2136 62 52 72 chr20 3423117 3423423 -68730459 - AluSc SINE Alu -7 302 3 766 129 9 9 chr20 3423489 3423605 -68730277 + FLAM_C SINE Alu 1 116 -27 22 35 0 0 chr20 3423607 3423636 -68730246 + AT_rich Low_complexity Low_complexity 1 29 0 764 257 119 63 chr20 3423636 3423755 -68730127 + L1MEd LINE L1 1511 1622 -4804 923 199 92 10 chr20 3423755 3423961 -68729921 - MER58A DNA MER1_type 0 224 2 764 257 119 63 chr20 3423961 3424905 -68728977 + L1MEd LINE L1 1622 2781 -3645 2119 114 0 23 chr20 3424920 3425226 -68728656 - AluSx SINE Alu -13 299 1 1303 245 62 90 chr20 3425232 3425685 -68728197 - L1MC4 LINE L1 0 8042 7623 974 228 9 9 chr20 3425685 3425909 -68727973 - MER58A DNA MER1_type 0 224 1 1303 245 62 90 chr20 3425909 3426312 -68727570 - L1MC4 LINE L1 -419 7623 7210 700 224 122 25 chr20 3426416 3426777 -68727105 + L1MEd LINE L1 3151 3546 -2880 207 0 0 0 chr20 3427508 3427531 -68726351 + (TA)n Simple_repeat Simple_repeat 2 24 0 9502 32 14 0 chr20 3427531 3429458 -68724424 - L1PA4 LINE L1 -2 6153 4211 915 74 0 0 chr20 3429463 3429584 -68724298 - L1P LINE L1 -6025 121 1 1061 259 91 37 chr20 3429639 3430100 -68723782 + L1MEd LINE L1 3764 4277 -2149 1859 164 10 0 chr20 3430100 3430399 -68723483 + AluJb SINE Alu 1 302 -10 1061 259 91 37 chr20 3430399 3430640 -68723242 + L1MEd LINE L1 4277 4504 -1922 827 278 140 105 chr20 3430661 3431796 -68722086 - L2 LINE L2 -1039 2275 1101 493 245 66 0 chr20 3431811 3431962 -68721920 - MER104 DNA Tc2 -16 164 4 240 185 15 31 chr20 3431965 3432030 -68721852 - MLT1L LTR MaLR -6 609 546 3319 56 9 0 chr20 3432146 3432578 -68721304 - L1PA7 LINE L1 -236 5918 5483 335 277 130 12 chr20 3432624 3432877 -68721005 + L1ME4a LINE L1 5813 6095 -26 1913 122 0 0 chr20 3432948 3433210 -68720672 + AluSx SINE Alu 38 299 -13 705 137 144 7 chr20 3433797 3433936 -68719946 + L1MB7 LINE L1 5864 6021 -163 525 158 50 8 chr20 3433940 3434060 -68719822 + L1MB7 LINE L1 6060 6184 0 406 222 202 30 chr20 3434091 3434294 -68719588 - L1MC5 LINE L1 -118 7843 7606 333 280 30 8 chr20 3434298 3434430 -68719452 - L1MC/D LINE L1 -1992 5816 5682 384 325 80 15 chr20 3434826 3435026 -68718856 + HAL1 LINE L1 1055 1267 -1240 736 155 8 23 chr20 3435026 3435180 -68718702 + L1PB2 LINE L1 6013 6164 0 250 275 50 17 chr20 3435246 3435366 -68718516 + HAL1 LINE L1 1516 1639 -868 2005 148 0 7 chr20 3435915 3436219 -68717663 - AluSx SINE Alu -10 302 1 229 114 91 0 chr20 3436362 3436406 -68717476 + L1MEc LINE L1 2424 2471 -3925 924 142 24 0 chr20 3436407 3436576 -68717306 + L1PA16 LINE L1 5876 6048 -118 225 121 52 52 chr20 3436578 3436636 -68717246 + L1MEc LINE L1 2954 3011 -3204 517 180 90 0 chr20 3436650 3436772 -68717110 + L1PA16 LINE L1 6034 6166 0 2056 251 34 13 chr20 3436779 3437219 -68716663 + L1M4 LINE L1 2346 2808 -3338 1545 160 21 46 chr20 3437219 3437500 -68716382 - AluJo SINE Alu -26 286 13 2056 251 34 13 chr20 3437500 3437767 -68716115 + L1M4 LINE L1 2808 3068 -3078 29644 89 13 16 chr20 3437767 3443504 -68710378 + L1PA7 LINE L1 736 6469 0 1808 242 115 38 chr20 3443471 3443511 -68710371 + L1ME2 LINE L1 5595 5631 -1018 * 2256 93 3 0 chr20 3443511 3443801 -68710081 + AluSg1 SINE Alu 1 291 -18 2090 132 84 3 chr20 3443801 3444156 -68709726 + L1PA15 LINE L1 5777 6160 -5 1808 242 115 38 chr20 3444156 3444234 -68709648 + L1ME2 LINE L1 5631 5702 -947 1846 179 3 7 chr20 3444234 3444536 -68709346 - AluJb SINE Alu -11 301 1 1808 242 115 38 chr20 3444536 3445241 -68708641 + L1ME2 LINE L1 5702 6645 -4 480 298 121 27 chr20 3445268 3445600 -68708282 + L1M4 LINE L1 2131 2493 -3653 198 80 60 0 chr20 3445640 3445690 -68708192 + (TA)n Simple_repeat Simple_repeat 1 53 0 1963 119 0 58 chr20 3445691 3446002 -68707880 - AluSg SINE Alu -17 293 1 588 288 49 18 chr20 3446649 3447070 -68706812 + L1MC4a LINE L1 5472 5904 -1904 234 0 0 0 chr20 3447220 3447246 -68706636 + (CAA)n Simple_repeat Simple_repeat 2 27 0 1188 164 4 44 chr20 3447346 3447572 -68706310 + AluJo SINE Alu 85 301 -11 508 250 190 33 chr20 3448060 3448192 -68705690 - LTR16A LTR ERVL -103 347 237 2543 51 0 0 chr20 3448192 3448484 -68705398 - AluY SINE Alu -19 292 1 508 250 190 33 chr20 3448484 3448651 -68705231 - LTR16A LTR ERVL -213 237 1 1232 283 50 6 chr20 3448767 3449128 -68704754 + MLT1J LTR MaLR 43 419 -92 224 163 0 20 chr20 3449198 3449247 -68704635 + (TA)n Simple_repeat Simple_repeat 1 48 0 568 185 8 46 chr20 3449247 3449377 -68704505 - FLAM_C SINE Alu -16 127 3 245 164 36 0 chr20 3449403 3449458 -68704424 - MLT1L LTR MaLR -414 201 145 795 301 158 12 chr20 3449504 3450066 -68703816 - L2 LINE L2 -2203 1111 468 913 207 143 45 chr20 3450111 3450377 -68703505 + AluJo SINE Alu 2 293 -19 48 60 0 0 chr20 3450556 3450639 -68703243 + AT_rich Low_complexity Low_complexity 1 83 0 351 0 0 0 chr20 3451011 3451050 -68702832 + (CA)n Simple_repeat Simple_repeat 2 40 0 2220 101 7 0 chr20 3451056 3451352 -68702530 - AluSq SINE Alu -15 298 1 4534 168 54 89 chr20 3451549 3451618 -68702264 - Charlie1 DNA MER1_type 0 2761 2691 2137 98 0 7 chr20 3451618 3451933 -68701949 - AluSx SINE Alu 0 313 1 4534 168 54 89 chr20 3451933 3452935 -68700947 - Charlie1 DNA MER1_type -70 2691 1656 3150 47 0 0 chr20 3452935 3453319 -68700563 - L1PA5 LINE L1 -1 6153 5770 4534 168 54 89 chr20 3453319 3453377 -68700505 - Charlie1 DNA MER1_type -1105 1656 1598 1391 6 0 12 chr20 3453377 3453540 -68700342 - L1PA2 LINE L1 0 6155 5995 4534 168 54 89 chr20 3453540 3453913 -68699969 - Charlie1 DNA MER1_type -1163 1598 1 411 288 61 58 chr20 3453949 3454244 -68699638 + L2 LINE L2 2369 2664 -650 341 308 221 13 chr20 3454220 3454528 -68699354 + L2 LINE L2 2809 3180 -133 * 242 292 79 63 chr20 3454589 3454904 -68698978 - L2 LINE L2 -1389 1925 1606 245 342 108 9 chr20 3455410 3455521 -68698361 + L2 LINE L2 3151 3272 0 207 257 36 67 chr20 3455902 3456048 -68697834 + MIR SINE MIR 47 186 -66 192 77 0 0 chr20 3456191 3456217 -68697665 + (TG)n Simple_repeat Simple_repeat 1 26 0 2775 7 0 0 chr20 3456499 3456799 -68697083 - AluY SINE Alu -11 300 1 2018 171 12 0 chr20 3456816 3457160 -68696722 - MER7A DNA MER2_type 0 346 1 180 275 0 0 chr20 3457696 3457736 -68696146 - MIR SINE MIR -5 257 218 402 176 0 37 chr20 3457963 3458071 -68695811 + C-rich Low_complexity Low_complexity 4 107 0 1719 136 0 43 chr20 3458081 3458361 -68695521 - AluJo SINE Alu -44 268 1 853 247 98 47 chr20 3458479 3458775 -68695107 + L2 LINE L2 3003 3313 0 2222 109 0 10 chr20 3458862 3459164 -68694718 + AluSx SINE Alu 1 299 -13 1734 159 0 66 chr20 3459173 3459506 -68694376 + AluJb SINE Alu 1 311 -1 330 302 79 7 chr20 3459719 3459858 -68694024 - L1MC/D LINE L1 -2058 5750 5602 243 0 0 0 chr20 3459919 3459946 -68693936 + (TGG)n Simple_repeat Simple_repeat 3 29 0 257 339 59 42 chr20 3459961 3460247 -68693635 + L1ME LINE L1 5339 5629 -492 26 0 0 0 chr20 3460482 3460508 -68693374 + AT_rich Low_complexity Low_complexity 1 26 0 2166 109 17 7 chr20 3460511 3460813 -68693069 + AluSq SINE Alu 5 309 -4 381 297 146 21 chr20 3461377 3461569 -68692313 - MIR SINE MIR 0 262 47 2313 100 0 3 chr20 3461812 3462113 -68691769 - AluSg SINE Alu -10 300 1 1290 199 101 38 chr20 3463653 3463741 -68690141 - MER2 DNA MER2_type -8 337 256 2285 99 3 3 chr20 3463741 3464043 -68689839 + AluSx SINE Alu 1 302 -10 1290 199 101 38 chr20 3464043 3464271 -68689611 - MER2 DNA MER2_type -89 256 1 292 231 56 28 chr20 3464802 3464910 -68688972 - L1ME4a LINE L1 -43 6078 5968 21 36 0 0 chr20 3465040 3465068 -68688814 + AT_rich Low_complexity Low_complexity 1 28 0 1573 147 0 0 chr20 3465468 3465693 -68688189 + AluSq SINE Alu 1 225 -88 904 173 0 32 chr20 3465693 3465878 -68688004 - L1P LINE L1 -1290 4856 4678 456 266 18 0 chr20 3466310 3466423 -68687459 + L2 LINE L2 769 883 -2431 1349 218 62 87 chr20 3466424 3466631 -68687251 + LTR16A1 LTR ERVL 1 212 -245 487 206 124 0 chr20 3466631 3466728 -68687154 - MER81 DNA DNA -4 110 2 1349 218 62 87 chr20 3466728 3466989 -68686893 + LTR16A1 LTR ERVL 212 457 0 204 286 91 13 chr20 3466992 3467069 -68686813 + L2 LINE L2 880 962 -2352 550 306 43 14 chr20 3467076 3467285 -68686597 + L2 LINE L2 1290 1504 -1810 575 220 61 0 chr20 3467289 3467421 -68686461 + MER3 DNA MER1_type 1 140 -69 1947 238 97 21 chr20 3467423 3467955 -68685927 + L2 LINE L2 1931 2516 -798 2016 217 127 70 chr20 3467955 3468513 -68685369 - MLT1E LTR MaLR -2 591 2 1947 238 97 21 chr20 3468513 3468586 -68685296 + L2 LINE L2 2516 2582 -732 465 350 132 20 chr20 3468824 3469463 -68684419 + L2 LINE L2 2583 3310 -3 2315 71 4 0 chr20 3469728 3470056 -68683826 - AluY SINE Alu 0 329 1 2683 19 6 10 chr20 3470413 3470725 -68683157 - AluY SINE Alu 0 311 1 1871 213 89 39 chr20 3472703 3473290 -68680592 + HAL1b LINE L1 351 966 -382 327 235 103 65 chr20 3473665 3473864 -68680018 - L1ME1 LINE L1 -276 5886 5684 480 193 67 47 chr20 3474020 3474170 -68679712 + HAL1b LINE L1 1196 1348 0 405 172 32 11 chr20 3475460 3475553 -68678329 - L1MB3 LINE L1 -2 6181 6087 2711 111 31 7 chr20 3475561 3475986 -68677896 - L1MA4 LINE L1 -282 6018 5584 2240 78 0 7 chr20 3476463 3476773 -68677109 + AluSx SINE Alu 3 310 0 24 0 0 0 chr20 3476893 3476917 -68676965 + AT_rich Low_complexity Low_complexity 1 24 0 1723 158 14 7 chr20 3477157 3477448 -68676434 - AluJo SINE Alu -19 293 1 1293 202 20 4 chr20 3479279 3479527 -68674355 - L1MB3 LINE L1 0 6183 5932 354 322 40 7 chr20 3479739 3479888 -68673994 - L2 LINE L2 -220 3052 2899 2282 88 0 0 chr20 3480206 3480489 -68673393 + AluY SINE Alu 1 283 -28 1939 100 9 94 chr20 3480908 3481249 -68672633 + AluSx SINE Alu 1 312 0 2163 110 7 10 chr20 3482044 3482353 -68671529 + AluSx SINE Alu 1 308 -4 237 239 90 45 chr20 3482687 3482754 -68671128 + L2 LINE L2 3185 3254 -18 2369 75 7 7 chr20 3483431 3483736 -68670146 + AluY SINE Alu 1 305 -6 1111 126 0 6 chr20 3483784 3483943 -68669939 + FRAM SINE Alu 1 154 -22 3336 203 19 13 chr20 3483957 3484584 -68669298 + MER82 DNA MER2_type 1 631 -22 2747 125 101 9 chr20 3484601 3485056 -68668826 - Tigger3(Golem) DNA MER2_type -2 3027 2531 274 240 0 0 chr20 3485060 3485110 -68668772 - Tigger3(Golem) DNA MER2_type -2969 60 11 2015 158 0 0 chr20 3485211 3485508 -68668374 + AluJo SINE Alu 1 297 -15 976 234 118 17 chr20 3485512 3485867 -68668015 - L1MC5 LINE L1 -311 7650 7260 * 1048 196 27 162 chr20 3485835 3486354 -68667528 - L1MC5 LINE L1 -902 7059 6611 2027 211 41 41 chr20 3486437 3486629 -68667253 - L1MC5 LINE L1 -1907 5901 5710 931 48 112 0 chr20 3486629 3486754 -68667128 - MER85 DNA T2_type 0 139 1 2027 211 41 41 chr20 3486754 3487124 -68666758 - L1MC5 LINE L1 -2097 5711 5339 240 288 81 9 chr20 3487384 3487495 -68666387 - L1 LINE L1 -1141 5005 4887 26 0 0 0 chr20 3487633 3487659 -68666223 + AT_rich Low_complexity Low_complexity 1 26 0 1018 128 0 0 chr20 3487958 3488091 -68665791 + FLAM_A SINE Alu 1 133 0 737 173 8 23 chr20 3488665 3488798 -68665084 + MER3 DNA MER1_type 1 131 -78 185 0 0 39 chr20 3488798 3488824 -68665058 + (TTTAA)n Simple_repeat Simple_repeat 1 25 0 1630 131 123 0 chr20 3489158 3489460 -68664422 - AluSx SINE Alu 0 333 1 1862 144 10 20 chr20 3489652 3489950 -68663932 + AluJb SINE Alu 1 295 -17 2237 102 0 20 chr20 3490379 3490684 -68663198 - AluSg SINE Alu -11 299 1 251 270 0 24 chr20 3491901 3491996 -68661886 - MIR3 SINE MIR -3 205 113 585 76 0 0 chr20 3492092 3492171 -68661711 + (TCTA)n Simple_repeat Simple_repeat 4 82 0 2362 112 0 0 chr20 3494626 3494938 -68658944 + AluSx SINE Alu 1 312 0 1839 140 3 37 chr20 3496382 3496682 -68657200 + AluJo SINE Alu 1 290 -22 1162 150 155 19 chr20 3496911 3497118 -68656764 - MER46A DNA MER2_type -1 235 1 873 154 0 37 chr20 3497380 3497516 -68656366 + FLAM_C SINE Alu 1 131 -2 210 235 0 0 chr20 3498115 3498166 -68655716 + A-rich Low_complexity Low_complexity 4 54 0 255 226 19 0 chr20 3498891 3498944 -68654938 + MER112 DNA MER1_type 195 248 -12 2379 100 0 3 chr20 3498949 3499259 -68654623 + AluSc SINE Alu 1 309 0 303 353 0 0 chr20 3499756 3499872 -68654010 + MIR3 SINE MIR 84 199 -9 314 272 50 56 chr20 3500696 3500876 -68653006 + L1MB8 LINE L1 5181 5359 -787 3238 162 109 50 chr20 3501073 3501868 -68652014 + L1MB7 LINE L1 5195 6033 -151 612 188 187 26 chr20 3501896 3502085 -68651797 + L1MB8 LINE L1 5845 6050 -120 572 171 130 41 chr20 3502085 3502231 -68651651 + L1MB8 LINE L1 5845 6003 -175 3772 199 40 20 chr20 3502244 3503245 -68650637 - L1M4 LINE L1 -609 5575 4549 1843 134 3 11 chr20 3503245 3503570 -68650312 - AluJb SINE Alu 0 323 1 3772 199 40 20 chr20 3503570 3503675 -68650207 - L1M4 LINE L1 -1635 4549 4448 2464 221 54 40 chr20 3503667 3504394 -68649488 - L1M4 LINE L1 -2049 4097 3358 * 2215 86 3 58 chr20 3504394 3504720 -68649162 - AluSc SINE Alu -1 308 1 2464 221 54 40 chr20 3504720 3504738 -68649144 - L1M4 LINE L1 -2788 3358 3342 2273 99 0 3 chr20 3505379 3505673 -68648209 - AluSq SINE Alu -20 293 1 261 196 0 0 chr20 3505854 3505905 -68647977 - MER91B DNA MER1_type -138 52 2 319 281 141 22 chr20 3505977 3506162 -68647720 + L1ME4a LINE L1 5670 5876 -245 318 239 96 0 chr20 3506210 3506335 -68647547 + L1ME4a LINE L1 1200 6040 -7 2342 214 98 26 chr20 3506858 3507499 -68646383 - MER76 LTR ERV -1 687 1 2437 97 0 0 chr20 3507540 3507850 -68646032 + AluSx SINE Alu 1 310 -2 215 203 270 0 chr20 3508477 3508551 -68645331 - MIR SINE MIR -90 118 25 664 280 129 4 chr20 3508781 3509006 -68644876 - MIR SINE MIR -1 261 9 186 286 14 29 chr20 3509031 3509101 -68644781 - MIR SINE MIR -193 69 1 251 197 106 15 chr20 3509538 3509604 -68644278 + L2 LINE L2 3241 3312 -1 1104 218 68 12 chr20 3512493 3512909 -68640973 + L1ME LINE L1 5028 5462 -704 977 190 23 36 chr20 3512916 3513137 -68640745 - Charlie1 DNA MER1_type -284 2477 2260 284 331 11 56 chr20 3513510 3513688 -68640194 + Charlie7 DNA MER1_type 24 193 -2419 2130 278 145 35 chr20 3513882 3514957 -68638925 + Charlie7 DNA MER1_type 483 1676 -936 1322 198 8 4 chr20 3514957 3515194 -68638688 - MER8 DNA MER2_type -1 238 1 1065 223 193 18 chr20 3515194 3515622 -68638260 + Charlie7 DNA MER1_type 1675 2178 -434 711 235 87 32 chr20 3515654 3515999 -68637883 + Charlie7 DNA MER1_type 2221 2584 -28 739 234 46 46 chr20 3516499 3516696 -68637186 + MIR SINE MIR 3 199 -63 1730 185 0 16 chr20 3517003 3517316 -68636566 + AluJo SINE Alu 1 308 -4 493 275 32 50 chr20 3517356 3517469 -68636413 + MIR SINE MIR 49 158 -104 2279 109 0 3 chr20 3517469 3517772 -68636110 + AluSx SINE Alu 1 302 -10 493 275 32 50 chr20 3517772 3517876 -68636006 + MIR SINE MIR 158 262 0 2410 93 10 0 chr20 3518106 3518416 -68635466 + AluSq SINE Alu 1 313 0 2499 75 7 0 chr20 3518902 3519210 -68634672 - AluSp SINE Alu -3 310 1 639 282 110 18 chr20 3519223 3519450 -68634432 + MIR SINE MIR 15 262 0 6169 67 16 2 chr20 3520561 3521348 -68632534 + L1PA11 LINE L1 5375 6172 -2 766 271 74 23 chr20 3522091 3522522 -68631360 - L1M4 LINE L1 -2324 3822 3370 6648 137 39 17 chr20 3522527 3524107 -68629775 - L1MA4 LINE L1 0 6300 4667 2207 135 0 0 chr20 3524107 3524419 -68629463 + AluSq SINE Alu 1 312 -1 6648 137 39 17 chr20 3524419 3524963 -68628919 - L1MA4 LINE L1 -1633 4667 4136 2694 149 43 17 chr20 3525033 3525126 -68628756 + L1MB4 LINE L1 5685 5774 -406 369 62 0 0 chr20 3525126 3525174 -68628708 + (TG)n Simple_repeat Simple_repeat 2 49 0 2694 149 43 17 chr20 3525174 3525563 -68628319 + L1MB4 LINE L1 5774 6180 0 1009 193 16 44 chr20 3525588 3525837 -68628045 + L1MD2 LINE L1 4616 4857 -1289 780 192 8 0 chr20 3525846 3525976 -68627906 - FLAM_A SINE Alu -6 136 6 1914 137 0 70 chr20 3525990 3526318 -68627564 - AluJb SINE Alu -7 305 1 3547 182 18 39 chr20 3526320 3526882 -68627000 + L1MD2 LINE L1 4849 5376 -983 2083 125 10 10 chr20 3526882 3527179 -68626703 + AluSx SINE Alu 1 297 -15 3547 182 18 39 chr20 3527179 3527747 -68626135 + L1MD2 LINE L1 5376 5954 -405 497 137 21 42 chr20 3527775 3527870 -68626012 - MLT1E1 LTR MaLR -341 313 221 394 216 45 0 chr20 3527858 3527946 -68625936 - MLT1E1 LTR MaLR -558 96 5 * 21 0 0 0 chr20 3528128 3528149 -68625733 + AT_rich Low_complexity Low_complexity 1 21 0 2235 161 92 14 chr20 3530048 3530483 -68623399 - L1MB7 LINE L1 -8 6176 5708 1765 145 4 7 chr20 3530591 3530867 -68623015 + AluSx SINE Alu 23 297 -15 1510 122 5 5 chr20 3530966 3531187 -68622695 - AluSg/x SINE Alu 0 310 90 2501 52 7 0 chr20 3531187 3531477 -68622405 + L1PA4 LINE L1 5864 6155 0 541 205 49 44 chr20 3532755 3532960 -68620922 + L1MC5 LINE L1 7723 7928 -33 894 148 0 22 chr20 3532960 3533095 -68620787 + FLAM_C SINE Alu 2 133 0 411 263 73 69 chr20 3533653 3533927 -68619955 + HAL1 LINE L1 2225 2499 -8 191 88 29 0 chr20 3534925 3534959 -68618923 + (TTCA)n Simple_repeat Simple_repeat 1 35 0 202 261 0 0 chr20 3535479 3535525 -68618357 + C-rich Low_complexity Low_complexity 3 48 0 414 0 0 0 chr20 3535642 3535688 -68618194 + (TTTTG)n Simple_repeat Simple_repeat 1 46 0 1904 128 11 7 chr20 3535692 3535966 -68617916 - AluSx SINE Alu -37 275 1 1588 63 72 36 chr20 3536300 3536521 -68617361 - MER30 DNA MER1_type 0 230 2 284 246 14 0 chr20 3536788 3536857 -68617025 - MER46C DNA MER2_type 0 338 269 374 243 37 47 chr20 3537346 3537453 -68616429 - L2 LINE L2 0 3313 3208 535 251 38 66 chr20 3539176 3539359 -68614523 + MER104 DNA MER2_type 2 179 -1 1761 237 97 97 chr20 3540463 3541372 -68612510 - HAL1 LINE L1 0 2507 1596 2097 139 0 0 chr20 3541372 3541674 -68612208 + AluJb SINE Alu 1 302 -10 1761 237 97 97 chr20 3541674 3541819 -68612063 - HAL1 LINE L1 -910 1597 1453 321 225 0 25 chr20 3541833 3541913 -68611969 - L1ME3A LINE L1 -12 6158 6081 376 258 33 53 chr20 3542047 3542198 -68611684 - L1ME3A LINE L1 -104 6066 5919 2301 100 0 13 chr20 3542200 3542509 -68611373 - AluSx SINE Alu -7 305 1 1020 241 109 68 chr20 3542524 3542627 -68611255 + L1M4 LINE L1 2902 2999 -3147 889 171 114 0 chr20 3542627 3542785 -68611097 + MER5B DNA MER1_type 3 178 0 1020 241 109 68 chr20 3542785 3543296 -68610586 + L1M4 LINE L1 2999 3541 -2605 2470 65 0 0 chr20 3543313 3543606 -68610276 + AluY SINE Alu 1 293 -18 417 247 72 46 chr20 3543615 3543809 -68610073 + L1M4 LINE L1 3891 4089 -2057 1408 171 57 0 chr20 3543809 3544037 -68609845 + Tigger7 DNA MER2_type 25 265 -468 524 185 11 0 chr20 3544038 3544130 -68609752 + Tigger7 DNA MER2_type 2390 2482 -5 295 267 67 30 chr20 3544750 3544885 -68608997 + L2 LINE L2 2849 2988 -284 2384 221 58 45 chr20 3544905 3545614 -68608268 - MER21B LTR ERV1 -83 780 63 326 305 109 6 chr20 3545655 3545829 -68608053 + L2 LINE L2 3109 3300 -13 1876 146 16 25 chr20 3546357 3546672 -68607210 - AluJo SINE Alu 0 312 1 795 284 75 19 chr20 3547323 3547643 -68606239 + L2 LINE L2 2070 2407 -907 912 273 163 28 chr20 3547643 3548258 -68605624 + L2 LINE L2 2581 3275 -38 1812 110 46 19 chr20 3548302 3548565 -68605317 + AluSx SINE Alu 21 290 -22 2740 94 46 23 chr20 3550392 3550818 -68603064 + L1PB1 LINE L1 5742 6176 0 22 0 0 0 chr20 3551230 3551252 -68602630 + AT_rich Low_complexity Low_complexity 1 22 0 28 48 0 0 chr20 3551334 3551376 -68602506 + AT_rich Low_complexity Low_complexity 1 42 0 630 297 70 18 chr20 3551998 3552227 -68601655 - MIR SINE MIR 0 262 22 439 294 127 8 chr20 3553087 3553295 -68600587 - MIR SINE MIR -23 239 12 3864 81 4 6 chr20 3553540 3554033 -68599849 - L1PA8 LINE L1 -2 6170 5679 2041 122 7 0 chr20 3554669 3554975 -68598907 - AluSx SINE Alu 0 308 1 1231 255 100 59 chr20 3555285 3556058 -68597824 + L1MEd LINE L1 563 1303 -5007 3679 170 28 6 chr20 3556058 3556710 -68597172 + L1MB3 LINE L1 5511 6176 -7 1231 255 100 59 chr20 3556710 3556731 -68597151 + L1MEd LINE L1 1303 1322 -4988 2343 114 0 0 chr20 3556731 3557038 -68596844 + AluSx SINE Alu 1 307 -5 1231 255 100 59 chr20 3557038 3557291 -68596591 + L1MEd LINE L1 1322 1661 -4649 1596 273 137 20 chr20 3557437 3558101 -68595781 + L2 LINE L2 1957 2698 -616 565 188 157 13 chr20 3558150 3558381 -68595501 + MLT1E2 LTR MaLR 1 296 -330 896 187 0 0 chr20 3558386 3558541 -68595341 - FRAM SINE Alu -15 161 7 706 159 4 230 chr20 3558546 3558798 -68595084 + MLT1E2 LTR MaLR 410 604 -22 959 104 0 45 chr20 3558807 3558941 -68594941 + AluJo/FLAM SINE Alu 2 129 -173 458 129 0 71 chr20 3558870 3558955 -68594927 + FLAM_C SINE Alu 65 143 0 309 313 134 22 chr20 3560315 3560449 -68593433 - L1ME4a LINE L1 -199 5922 5774 499 217 130 7 chr20 3561460 3561598 -68592284 - MIR SINE MIR -16 246 92 483 228 168 60 chr20 3561840 3562072 -68591810 + L1MC4a LINE L1 5914 6170 -1638 22 35 0 0 chr20 3562073 3562102 -68591780 + AT_rich Low_complexity Low_complexity 1 29 0 255 175 0 0 chr20 3562964 3563021 -68590861 + CT-rich Low_complexity Low_complexity 3 59 0 195 100 0 0 chr20 3563022 3563052 -68590830 + (CA)n Simple_repeat Simple_repeat 1 30 0 465 229 106 37 chr20 3567412 3567769 -68586113 + MLT1J2 LTR MaLR 1 450 0 180 0 0 0 chr20 3567989 3568009 -68585873 + (CAA)n Simple_repeat Simple_repeat 2 21 0 234 0 0 0 chr20 3568450 3568476 -68585406 + (A)n Simple_repeat Simple_repeat 1 26 0 307 210 0 17 chr20 3569085 3569167 -68584715 + MLT1J LTR MaLR 247 381 -125 783 260 183 12 chr20 3569252 3569591 -68584291 - L2 LINE L2 -6 3307 2911 697 303 34 4 chr20 3569595 3569833 -68584049 + MER20B DNA MER1_type 202 446 -337 1046 209 88 86 chr20 3570834 3571207 -68582675 - MLT1D LTR MaLR -2 503 127 1924 130 38 0 chr20 3571207 3571499 -68582383 + AluJo SINE Alu 1 303 -9 1046 209 88 86 chr20 3571499 3571604 -68582278 - MLT1D LTR MaLR -378 127 24 1648 168 30 13 chr20 3571728 3572032 -68581850 - AluJo SINE Alu -3 309 1 1448 85 0 5 chr20 3572036 3572254 -68581628 - AluSc SINE Alu 0 308 92 581 278 12 0 chr20 3572254 3572423 -68581459 + MER20B DNA MER1_type 276 446 -337 497 121 0 0 chr20 3572536 3572602 -68581280 - AluS SINE Alu -243 66 1 357 313 134 5 chr20 3573001 3573218 -68580664 + MLT1K LTR MaLR 234 478 -110 2168 116 0 0 chr20 3573280 3573573 -68580309 + AluSx SINE Alu 1 293 -19 734 218 67 27 chr20 3573736 3573961 -68579921 - LTR16A1 LTR ERVL 0 457 224 408 228 24 31 chr20 3574016 3574143 -68579739 - LTR16A1 LTR ERVL -331 126 1 753 158 8 0 chr20 3574248 3574368 -68579514 + FRAM SINE Alu 48 168 -8 230 91 23 45 chr20 3574421 3574465 -68579417 - MLT1J LTR MaLR -378 133 91 239 272 112 32 chr20 3574519 3574644 -68579238 - MIR3 SINE MIR -41 167 33 23 0 0 0 chr20 3576338 3576361 -68577521 + GC_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr20 3576410 3576434 -68577448 + GC_rich Low_complexity Low_complexity 1 24 0 21 57 0 0 chr20 3579163 3579198 -68574684 + AT_rich Low_complexity Low_complexity 1 35 0 832 126 0 16 chr20 3579198 3579325 -68574557 - FLAM_C SINE Alu -18 125 1 1486 199 70 0 chr20 3579330 3579716 -68574166 - L1MD3 LINE L1 -8 7987 7575 245 150 0 0 chr20 3579781 3579821 -68574061 + Alu SINE Alu 250 289 -13 2091 108 0 17 chr20 3579880 3579891 -68573991 - AluSq SINE Alu -22 291 281 207 0 0 0 chr20 3579891 3579914 -68573968 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2091 108 0 17 chr20 3579914 3580198 -68573684 - AluSq SINE Alu -32 281 1 1496 117 24 12 chr20 3580198 3580446 -68573436 - LTR43 LTR ERV1 -351 251 1 3917 89 31 25 chr20 3580599 3580983 -68572899 - MER41A LTR ERV1 0 554 165 2291 84 24 0 chr20 3580983 3581281 -68572601 - AluSx SINE Alu -7 305 1 3917 89 31 25 chr20 3581281 3581447 -68572435 - MER41A LTR ERV1 -389 165 1 1227 238 122 45 chr20 3582122 3582145 -68571737 + MER74B LTR ERVL 56 76 -546 2276 101 0 0 chr20 3582145 3582443 -68571439 - AluSq SINE Alu -15 298 1 1227 238 122 45 chr20 3582443 3582927 -68570955 + MER74B LTR ERVL 76 602 -20 270 143 0 20 chr20 3583025 3583074 -68570808 + MLT1K LTR MaLR 502 549 0 236 59 59 59 chr20 3583231 3583299 -68570583 + (CCA)n Simple_repeat Simple_repeat 2 69 0 1750 158 7 3 chr20 3583385 3583670 -68570212 - AluJo SINE Alu -21 291 6 191 191 0 0 chr20 3588409 3588451 -68565431 - MIR SINE MIR -89 119 78 341 145 26 53 chr20 3588610 3588686 -68565196 - MIR SINE MIR -74 188 115 218 211 96 19 chr20 3591464 3591516 -68562366 + MIR SINE MIR 195 250 -12 1980 86 7 14 chr20 3591831 3592109 -68561773 - AluSx SINE Alu 0 312 37 371 266 28 7 chr20 3594128 3594261 -68559621 + MIR SINE MIR 50 191 -17 338 224 172 0 chr20 3594411 3594527 -68559355 + MER69 DNA AcHobo 1 136 -1090 210 71 0 0 chr20 3597346 3597374 -68556508 + (CAG)n Simple_repeat Simple_repeat 2 29 0 232 118 0 59 chr20 3597522 3597573 -68556309 + (CCCCCG)n Simple_repeat Simple_repeat 5 52 0 2412 67 0 0 chr20 3598207 3598507 -68555375 - AluSc SINE Alu -9 300 1 2392 82 3 0 chr20 3598530 3598836 -68555046 - AluSp SINE Alu -6 307 1 1497 178 0 48 chr20 3599166 3599410 -68554472 - AluJo SINE Alu -5 307 80 2382 97 0 0 chr20 3599410 3599720 -68554162 + AluSq SINE Alu 1 310 -3 1497 178 0 48 chr20 3599720 3599789 -68554093 - AluJo SINE Alu -232 80 9 327 306 45 13 chr20 3599833 3599849 -68554033 - L1MA10 LINE L1 -2 6332 6317 1438 239 38 23 chr20 3599849 3600292 -68553590 - L1ME2 LINE L1 -9 6155 5706 811 163 2 9 chr20 3600301 3600470 -68553412 - MLT2B2 LTR ERVL -19 535 322 303 312 113 39 chr20 3600660 3600891 -68552991 + L2 LINE L2 2979 3226 -46 369 188 12 0 chr20 3601497 3601577 -68552305 - L1ME2 LINE L1 -533 5637 5557 * 758 219 139 0 chr20 3601573 3601811 -68552071 + L1ME3A LINE L1 5900 6170 0 185 280 120 13 chr20 3602133 3602208 -68551674 - L2 LINE L2 -29 3284 3202 795 283 111 6 chr20 3603201 3603554 -68550328 + MLT1J LTR MaLR 91 480 -31 1071 192 264 5 chr20 3605694 3606122 -68547760 + MLT1H LTR MaLR 11 549 0 260 313 173 6 chr20 3606153 3606226 -68547656 - MIR SINE MIR -7 255 196 2074 144 0 0 chr20 3606226 3606532 -68547350 - AluSx SINE Alu -1 311 6 260 313 173 6 chr20 3606532 3606637 -68547245 - MIR SINE MIR -66 196 47 378 0 0 0 chr20 3609581 3609623 -68544259 + (CA)n Simple_repeat Simple_repeat 2 43 0 243 303 126 8 chr20 3610577 3610696 -68543186 + L2 LINE L2 3180 3312 -1 1931 119 61 0 chr20 3611226 3611504 -68542378 - AluSx SINE Alu -17 295 1 309 26 0 0 chr20 3611527 3611536 -68542346 + (CA)n Simple_repeat Simple_repeat 1 47 0 309 26 0 0 chr20 3611536 3611574 -68542308 + (CA)n Simple_repeat Simple_repeat 2 39 0 683 280 37 5 chr20 3613639 3613828 -68540054 + MER91A DNA MER1_type 2 196 0 1753 156 13 36 chr20 3615101 3615223 -68538659 + AluJo SINE Alu 1 124 -188 2063 113 10 0 chr20 3615223 3615514 -68538368 - AluSx SINE Alu -18 294 1 * 2398 97 0 0 chr20 3615513 3615824 -68538058 - AluSx SINE Alu -1 311 1 1753 156 13 36 chr20 3615824 3616008 -68537874 + AluJo SINE Alu 434 300 -12 2334 90 0 6 chr20 3616094 3616405 -68537477 - AluSc SINE Alu 0 309 1 180 370 65 0 chr20 3617211 3617303 -68536579 - MIR SINE MIR -43 219 122 1369 270 107 29 chr20 3617303 3617710 -68536172 + L1MC4 LINE L1 7332 7799 -243 2036 121 3 10 chr20 3617710 3618008 -68535874 + AluSx SINE Alu 1 296 -16 1369 270 107 29 chr20 3618008 3618181 -68535701 + L1MC4 LINE L1 7799 7957 -85 392 228 44 15 chr20 3618284 3618420 -68535462 + L1MC4 LINE L1 7903 8042 0 1960 140 0 23 chr20 3620022 3620330 -68533552 - AluJo SINE Alu -11 301 1 326 247 11 142 chr20 3620330 3620394 -68533488 - MIR SINE MIR -18 244 173 2063 142 3 0 chr20 3620394 3620703 -68533179 - AluSx SINE Alu -2 310 1 326 247 11 142 chr20 3620703 3620828 -68533054 - MIR SINE MIR -89 173 80 242 281 31 0 chr20 3621622 3621686 -68532196 + (CTGGGG)n Simple_repeat Simple_repeat 2 67 0 242 172 78 31 chr20 3623092 3623156 -68530726 + L2 LINE L2 2721 2787 -527 187 263 70 61 chr20 3623528 3623642 -68530240 - L2 LINE L2 -2773 541 427 4048 150 45 42 chr20 3623754 3623890 -68529992 + L1MB4 LINE L1 5022 5156 -1024 1655 142 68 14 chr20 3623890 3624171 -68529711 + AluJo SINE Alu 1 296 -16 2258 93 3 10 chr20 3624172 3624474 -68529408 + AluSc SINE Alu 1 300 -9 4048 150 45 42 chr20 3624474 3625477 -68528405 + L1MB4 LINE L1 5155 6172 -8 21 0 0 0 chr20 3626416 3626437 -68527445 + GC_rich Low_complexity Low_complexity 1 21 0 295 329 32 6 chr20 3627280 3627438 -68526444 + (TTGGGG)n Simple_repeat Simple_repeat 2 163 0 * 298 302 35 18 chr20 3627367 3627536 -68526346 + (TTAGGG)n Simple_repeat Simple_repeat 3 174 0 * 380 249 32 76 chr20 3627487 3627672 -68526210 + (TTGGGG)n Simple_repeat Simple_repeat 3 179 0 2214 128 0 0 chr20 3628568 3628880 -68525002 - AluSx SINE Alu 0 312 1 1774 149 6 40 chr20 3629061 3629384 -68524498 - AluJo SINE Alu 0 312 1 238 333 94 38 chr20 3629847 3630006 -68523876 + MLT1H LTR MaLR 112 279 -270 2112 115 0 0 chr20 3630332 3630618 -68523264 + AluSx SINE Alu 1 286 -26 1898 130 6 56 chr20 3630680 3631004 -68522878 - AluJb SINE Alu -2 310 3 219 284 75 0 chr20 3631007 3631074 -68522808 - MIR SINE MIR -112 150 79 777 262 68 17 chr20 3631091 3631385 -68522497 - MLT1J LTR MaLR -15 496 188 893 199 0 0 chr20 3631389 3631545 -68522337 + FRAM SINE Alu 8 163 -13 234 303 220 23 chr20 3631556 3631688 -68522194 - MLT1J LTR MaLR -317 194 37 198 347 84 0 chr20 3631958 3632053 -68521829 + MIR SINE MIR 5 107 -155 1267 67 0 0 chr20 3632613 3632777 -68521105 + AluY SINE Alu 136 299 -12 1937 111 44 0 chr20 3632785 3633055 -68520827 + AluSx SINE Alu 3 284 -28 314 273 81 20 chr20 3633481 3633580 -68520302 + HAL1 LINE L1 799 903 -1604 1677 184 0 16 chr20 3633580 3633884 -68519998 + AluJb SINE Alu 1 299 -13 336 279 225 0 chr20 3633895 3634024 -68519858 - MLT1J LTR MaLR -317 194 37 618 180 0 9 chr20 3634041 3634193 -68519689 + AluSg/x SINE Alu 196 310 0 2076 109 0 35 chr20 3634235 3634547 -68519335 - AluSx SINE Alu -7 305 5 741 221 75 42 chr20 3634550 3634763 -68519119 - MIR SINE MIR -41 221 2 297 75 0 0 chr20 3634765 3634805 -68519077 + (TTTA)n Simple_repeat Simple_repeat 3 42 0 718 174 8 15 chr20 3634817 3634917 -68518965 + AluJo/FLAM SINE Alu 2 102 -200 1645 181 0 17 chr20 3634917 3635204 -68518678 - AluJb SINE Alu -30 282 1 718 174 8 15 chr20 3635204 3635235 -68518647 + AluJo/FLAM SINE Alu 102 132 -170 426 250 167 57 chr20 3635238 3635430 -68518452 + HAL1 LINE L1 908 1120 -1387 236 206 134 21 chr20 3635577 3635674 -68518208 + MLT1L LTR MaLR 383 490 -125 247 293 46 63 chr20 3636354 3636417 -68517465 + HAL1b LINE L1 747 810 -538 2028 119 0 0 chr20 3636417 3636724 -68517158 + AluSg SINE Alu 3 309 0 247 293 46 63 chr20 3636724 3636833 -68517049 + HAL1b LINE L1 810 917 -431 304 388 8 15 chr20 3636935 3637069 -68516813 + HAL1 LINE L1 2228 2360 -147 421 142 0 43 chr20 3637069 3637336 -68516546 + AluJb SINE Alu 1 312 0 807 192 36 30 chr20 3637718 3638060 -68515822 + Tigger2 DNA MER2_type 1 2707 -11 267 31 0 0 chr20 3638133 3638165 -68515717 + (TAAA)n Simple_repeat Simple_repeat 3 34 0 2154 120 0 0 chr20 3638171 3638471 -68515411 + AluSx SINE Alu 1 300 -12 2094 134 20 64 chr20 3638474 3638629 -68515253 + L1MC2 LINE L1 5182 5342 -1080 1856 122 29 0 chr20 3638629 3638907 -68514975 + AluSx SINE Alu 9 294 -18 2094 134 20 64 chr20 3638907 3639253 -68514629 + L1MC2 LINE L1 5342 5675 -747 1492 171 42 65 chr20 3639254 3639331 -68514551 + AluJo SINE Alu 1 78 -224 2043 130 3 10 chr20 3639331 3639653 -68514229 - AluSx SINE Alu 0 312 1 1492 171 42 65 chr20 3639653 3639884 -68513998 + AluJo SINE Alu 78 302 0 555 141 16 16 chr20 3639893 3640014 -68513868 + GA-rich Low_complexity Low_complexity 4 124 0 2290 143 64 40 chr20 3640029 3640742 -68513140 + L1MC2 LINE L1 5661 6332 -12 812 99 0 0 chr20 3640772 3640883 -68512999 - AluSg/x SINE Alu -14 298 188 1537 111 0 0 chr20 3640883 3641091 -68512791 - AluSx SINE Alu -93 219 12 958 156 6 18 chr20 3641130 3641297 -68512585 + FRAM SINE Alu 1 165 -1 2235 109 3 0 chr20 3641638 3641941 -68511941 + AluSq SINE Alu 1 304 -9 186 43 0 0 chr20 3641970 3641993 -68511889 + (TTTTC)n Simple_repeat Simple_repeat 3 25 0 895 192 0 0 chr20 3642005 3642161 -68511721 - AluJb SINE Alu -21 291 136 2296 90 0 0 chr20 3642167 3642466 -68511416 - AluSg SINE Alu -11 299 1 407 265 24 36 chr20 3642833 3642999 -68510883 + L2 LINE L2 2149 2312 -1002 998 307 28 40 chr20 3643009 3643511 -68510371 - MLT1J LTR MaLR -3 508 13 306 329 21 7 chr20 3643933 3644073 -68509809 + L2 LINE L2 2914 3055 -217 317 258 41 10 chr20 3644654 3644751 -68509131 + MIR SINE MIR 92 191 -71 336 234 0 0 chr20 3644884 3644978 -68508904 + (TG)n Simple_repeat Simple_repeat 1 94 0 221 255 94 34 chr20 3645484 3645633 -68508249 - L2 LINE L2 -533 2781 2624 411 290 0 16 chr20 3646363 3646546 -68507336 + (CA)n Simple_repeat Simple_repeat 1 180 0 222 118 0 0 chr20 3646993 3647027 -68506855 + (TTCA)n Simple_repeat Simple_repeat 4 37 0 1426 171 15 15 chr20 3647027 3647296 -68506586 - AluJo SINE Alu -32 280 12 217 174 0 22 chr20 3647819 3647865 -68506017 + CT-rich Low_complexity Low_complexity 6 50 0 31 92 0 0 chr20 3647987 3648074 -68505808 + GC_rich Low_complexity Low_complexity 1 87 0 1003 125 0 0 chr20 3649437 3649581 -68504301 + AluJb SINE Alu 146 289 -23 2023 150 7 0 chr20 3650144 3650444 -68503438 - AluJb SINE Alu -10 302 1 207 223 0 0 chr20 3650650 3650703 -68503179 - MIR SINE MIR -63 145 93 2315 102 0 0 chr20 3650868 3651172 -68502710 - AluSq SINE Alu -9 304 1 269 200 67 0 chr20 3651266 3651326 -68502556 + L2 LINE L2 3205 3268 -4 1038 214 19 5 chr20 3651376 3651582 -68502300 + MER63A DNA MER1_type 1 209 -1 759 205 96 12 chr20 3652097 3652147 -68501735 - MER5A DNA MER1_type -6 183 139 1932 88 0 104 chr20 3652147 3652513 -68501369 + AluSx SINE Alu 1 333 0 759 205 96 12 chr20 3652513 3652627 -68501255 - MER5A DNA MER1_type -50 139 4 184 219 38 95 chr20 3652696 3652801 -68501081 + L2 LINE L2 1687 1785 -1529 417 177 0 0 chr20 3652813 3652875 -68501007 + AluJ/FRAM SINE Alu 231 292 -20 2255 103 0 0 chr20 3653127 3653428 -68500454 + AluSx SINE Alu 1 301 -11 384 263 163 37 chr20 3653564 3653754 -68500128 + L2 LINE L2 3085 3298 -15 442 256 88 37 chr20 3653758 3653973 -68499909 + L1MC5 LINE L1 7558 7783 -178 198 118 0 0 chr20 3654239 3654273 -68499609 + (TG)n Simple_repeat Simple_repeat 1 34 0 1986 145 0 3 chr20 3656756 3657053 -68496829 + AluSx SINE Alu 1 296 -16 1314 120 0 0 chr20 3658095 3658278 -68495604 - AluSg/x SINE Alu -3 307 125 2123 91 3 42 chr20 3658282 3658591 -68495291 - AluY SINE Alu -14 297 1 1847 131 13 55 chr20 3658591 3658903 -68494979 - AluJo SINE Alu -13 299 1 435 235 149 60 chr20 3658934 3659249 -68494633 - L1ME4a LINE L1 -162 5959 5617 247 208 0 0 chr20 3659282 3659335 -68494547 + A-rich Low_complexity Low_complexity 1 53 0 420 308 202 22 chr20 3659892 3660259 -68493623 + L2 LINE L2 2532 2964 -350 204 333 9 27 chr20 3660647 3660758 -68493124 + G-rich Low_complexity Low_complexity 5 113 0 1027 193 104 73 chr20 3661662 3661706 -68492176 - LTR16A1 LTR ERVL 0 457 416 2584 33 7 0 chr20 3661706 3662008 -68491874 - AluY SINE Alu -7 304 1 1027 193 104 73 chr20 3662008 3662347 -68491535 - LTR16A1 LTR ERVL -41 416 62 412 317 42 24 chr20 3666489 3666656 -68487226 + MIR SINE MIR 82 251 -11 355 257 22 37 chr20 3668295 3668431 -68485451 + MIR3 SINE MIR 10 143 -65 255 318 145 0 chr20 3672104 3672283 -68481599 + L1ME4a LINE L1 5613 5817 -304 198 0 0 0 chr20 3672433 3672455 -68481427 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 2184 88 7 3 chr20 3672475 3672769 -68481113 + AluSc SINE Alu 1 295 -14 308 272 68 0 chr20 3672770 3672873 -68481009 + L1ME4a LINE L1 5974 6083 -38 1480 117 14 0 chr20 3673034 3673248 -68480634 - AluSg/x SINE Alu -9 301 85 343 282 188 0 chr20 3673532 3673681 -68480201 - MIR SINE MIR -57 205 29 180 352 63 19 chr20 3674299 3674458 -68479424 - MIR3 SINE MIR -24 184 19 228 111 0 0 chr20 3675360 3675396 -68478486 + (CA)n Simple_repeat Simple_repeat 1 36 0 335 341 16 8 chr20 3676261 3676390 -68477492 + L1MC4a LINE L1 6873 7002 -806 401 296 63 12 chr20 3676453 3676701 -68477181 + L1MC4a LINE L1 7005 7228 -620 2301 108 0 0 chr20 3676737 3677042 -68476840 - AluSq SINE Alu -8 305 1 439 263 33 19 chr20 3677156 3677352 -68476530 + L1MC5 LINE L1 7268 7492 -522 198 0 0 0 chr20 3677364 3677386 -68476496 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 1999 116 48 0 chr20 3677412 3677706 -68476176 + AluSg SINE Alu 1 308 -2 1493 142 124 8 chr20 3677790 3678057 -68475825 - AluJb SINE Alu -13 299 2 633 179 69 58 chr20 3678064 3678237 -68475645 + MER58B DNA MER1_type 167 341 0 2412 80 0 0 chr20 3678381 3678682 -68475200 + AluSx SINE Alu 2 302 -10 2334 63 7 3 chr20 3678682 3678983 -68474899 + AluSp SINE Alu 1 302 -11 328 273 141 16 chr20 3678998 3679119 -68474763 + L1MC5 LINE L1 7609 7744 -217 450 329 136 30 chr20 3679778 3680146 -68473736 + L2 LINE L2 2864 3270 -2 420 279 71 7 chr20 3680764 3680904 -68472978 + MIR SINE MIR 25 173 -89 189 273 0 65 chr20 3682673 3682750 -68471132 - MIR SINE MIR -76 132 61 301 335 47 16 chr20 3684478 3684669 -68469213 + Charlie8 DNA MER1_type 4 200 -2217 1985 105 0 34 chr20 3684868 3685183 -68468699 - AluSx SINE Alu 0 305 1 248 259 111 0 chr20 3685304 3685385 -68468497 - L2 LINE L2 -5 3267 3178 2520 53 0 0 chr20 3685834 3686135 -68467747 + AluY SINE Alu 1 301 -10 804 167 0 36 chr20 3686222 3686360 -68467522 - FLAM_C SINE Alu 0 133 1 1044 168 0 0 chr20 3686458 3686619 -68467263 - FRAM SINE Alu -5 161 1 1391 202 3 63 chr20 3686630 3686947 -68466935 - AluSx SINE Alu -4 298 1 578 231 1 0 chr20 3686949 3687086 -68466796 - L1ME LINE L1 -551 5611 5474 261 0 0 0 chr20 3687224 3687253 -68466629 + (CA)n Simple_repeat Simple_repeat 2 30 0 1463 123 0 5 chr20 3687253 3687473 -68466409 + AluSg/x SINE Alu 93 311 -1 720 223 32 40 chr20 3687476 3687727 -68466155 + L1MC4a LINE L1 5589 5837 -1971 1240 149 0 0 chr20 3687728 3687909 -68465973 - AluSx SINE Alu -131 181 1 928 242 65 87 chr20 3687925 3688360 -68465522 - MLT2B3 LTR ERVL 0 554 128 2280 104 0 0 chr20 3688360 3688668 -68465214 - AluSx SINE Alu -4 308 1 928 242 65 87 chr20 3688668 3688694 -68465188 - MLT2B3 LTR ERVL -426 128 103 1641 171 38 3 chr20 3688695 3688987 -68464895 + AluSx SINE Alu 1 302 -10 232 374 146 0 chr20 3689170 3689293 -68464589 + L2 LINE L2 3132 3272 0 1588 183 0 64 chr20 3689342 3689494 -68464388 + AluJb SINE Alu 1 124 -188 2048 120 10 0 chr20 3689494 3689785 -68464097 + AluSx SINE Alu 3 296 -16 1588 183 0 64 chr20 3689785 3689944 -68463938 + AluJb SINE Alu 124 292 -20 2282 113 0 0 chr20 3689953 3690263 -68463619 + AluSx SINE Alu 1 310 -2 21 0 0 0 chr20 3690263 3690284 -68463598 + AT_rich Low_complexity Low_complexity 1 21 0 701 204 17 28 chr20 3690284 3690467 -68463415 - MLT1E LTR MaLR -381 186 1 25 51 0 0 chr20 3690686 3690725 -68463157 + AT_rich Low_complexity Low_complexity 1 39 0 1269 250 31 34 chr20 3691269 3691621 -68462261 + MLT1E LTR MaLR 243 593 0 2090 133 3 3 chr20 3691664 3691972 -68461910 + AluSx SINE Alu 1 308 -4 246 205 0 162 chr20 3691972 3692089 -68461793 - L1ME LINE L1 -460 5710 5613 2012 119 10 3 chr20 3692090 3692384 -68461498 - AluSq SINE Alu -17 296 1 25 31 0 0 chr20 3693586 3693618 -68460264 + GC_rich Low_complexity Low_complexity 1 32 0 2223 97 13 3 chr20 3695468 3695768 -68458114 + AluSx SINE Alu 7 309 -3 315 0 0 0 chr20 3695823 3695858 -68458024 + (CA)n Simple_repeat Simple_repeat 1 35 0 207 254 68 0 chr20 3697360 3697419 -68456463 + MIR SINE MIR 88 150 -112 2130 111 6 16 chr20 3697492 3697807 -68456075 + AluSx SINE Alu 1 312 0 206 255 235 10 chr20 3697907 3698009 -68455873 + MIR SINE MIR 76 200 -62 243 177 0 0 chr20 3700277 3700339 -68453543 + (CAT)n Simple_repeat Simple_repeat 3 64 0 711 179 0 0 chr20 3700536 3700681 -68453201 + CT-rich Low_complexity Low_complexity 2 146 0 42 0 0 0 chr20 3701890 3701932 -68451950 + GC_rich Low_complexity Low_complexity 1 42 0 1840 154 13 19 chr20 3703306 3703618 -68450264 - AluJb SINE Alu 0 312 3 1914 138 0 40 chr20 3704080 3704405 -68449477 + AluSx SINE Alu 1 312 0 270 0 0 0 chr20 3706943 3706973 -68446909 + (TC)n Simple_repeat Simple_repeat 1 30 0 * 405 0 0 0 chr20 3706972 3707017 -68446865 + (CA)n Simple_repeat Simple_repeat 1 45 0 1875 48 0 52 chr20 3707993 3708244 -68445638 + AluY SINE Alu 37 274 -37 315 0 0 0 chr20 3708244 3708279 -68445603 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 276 109 16 62 chr20 3710498 3710562 -68443320 - MER45 DNA AcHobo -56 122 62 22 0 0 0 chr20 3710984 3711006 -68442876 + GC_rich Low_complexity Low_complexity 1 22 0 1926 160 0 3 chr20 3713103 3713396 -68440486 + AluJb SINE Alu 1 292 -20 324 243 141 40 chr20 3713399 3713425 -68440457 + L2 LINE L2 1689 1711 -1603 2249 92 0 23 chr20 3713425 3713730 -68440152 + AluSc SINE Alu 1 298 -11 324 243 141 40 chr20 3713730 3713880 -68440002 + L2 LINE L2 1711 1883 -1431 722 150 0 30 chr20 3713934 3714067 -68439815 + FLAM_A SINE Alu 2 130 -3 1331 167 36 113 chr20 3714266 3714601 -68439281 - AluJb SINE Alu -3 309 1 2027 80 8 0 chr20 3714603 3714854 -68439028 - AluY SINE Alu -8 303 51 350 103 35 0 chr20 3714854 3714912 -68438970 - AluSq/x SINE Alu -158 145 86 1328 156 5 22 chr20 3714912 3715136 -68438746 - AluJo SINE Alu -92 220 1 812 234 16 5 chr20 3715139 3715327 -68438555 - AluJb SINE Alu 0 312 123 1359 172 0 29 chr20 3715739 3715983 -68437899 - AluJo SINE Alu -17 295 59 25 0 0 0 chr20 3717235 3717260 -68436622 + AT_rich Low_complexity Low_complexity 1 25 0 2460 94 0 0 chr20 3717639 3717947 -68435935 - AluSg SINE Alu -1 309 2 2466 87 0 3 chr20 3717948 3718257 -68435625 - AluSx SINE Alu -4 308 1 1557 170 62 4 chr20 3718391 3718667 -68435215 + AluJb SINE Alu 1 292 -20 1167 152 6 6 chr20 3718673 3718851 -68435031 + FRAM SINE Alu 1 175 -1 1984 139 6 29 chr20 3718851 3719167 -68434715 + AluSx SINE Alu 1 309 -3 341 200 13 27 chr20 3719285 3719360 -68434522 + MLT1K LTR MaLR 156 229 -359 22 0 0 0 chr20 3721053 3721075 -68432807 + AT_rich Low_complexity Low_complexity 1 22 0 748 153 0 0 chr20 3724704 3724822 -68429060 + AluJo/FLAM SINE Alu 1 118 -184 2354 98 3 13 chr20 3724822 3725138 -68428744 + AluSp SINE Alu 1 313 0 2433 105 0 0 chr20 3725735 3726041 -68427841 - AluSx SINE Alu -6 306 1 483 286 8 8 chr20 3726044 3726177 -68427705 + LTR16C LTR ERVL 346 478 -13 984 155 0 0 chr20 3728031 3728173 -68425709 + FRAM SINE Alu 4 145 -31 205 317 72 56 chr20 3728216 3728396 -68425486 - L2 LINE L2 -831 2483 2301 522 211 49 49 chr20 3728548 3728690 -68425192 + FLAM_A SINE Alu 1 142 0 1948 167 3 3 chr20 3728892 3729203 -68424679 + AluJb SINE Alu 1 311 -1 2317 98 0 16 chr20 3729205 3729373 -68424509 - AluSx SINE Alu -11 301 139 2121 104 3 79 chr20 3729373 3729691 -68424191 - AluSq SINE Alu -19 294 1 2317 98 0 16 chr20 3729691 3729828 -68424054 - AluSx SINE Alu -173 139 1 263 366 14 7 chr20 3730258 3730400 -68423482 + MLT1L LTR MaLR 341 483 -132 325 316 70 37 chr20 3730485 3730672 -68423210 + L2 LINE L2 2849 3041 -231 2800 13 0 0 chr20 3731720 3732019 -68421863 + AluYb8 SINE Alu 1 299 -19 2113 142 0 7 chr20 3732291 3732594 -68421288 - AluSx SINE Alu -11 301 1 1756 172 21 3 chr20 3732714 3732999 -68420883 - AluJb SINE Alu -22 290 1 2374 98 3 0 chr20 3733001 3733012 -68420870 - AluSg SINE Alu -3 307 298 198 0 0 0 chr20 3733012 3733034 -68420848 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 2374 98 3 0 chr20 3733034 3733328 -68420554 - AluSg SINE Alu -12 298 1 2412 89 7 0 chr20 3733908 3734211 -68419671 - AluSq SINE Alu -8 305 1 2593 78 0 0 chr20 3734628 3734936 -68418946 - AluY SINE Alu -3 308 1 523 279 75 10 chr20 3735135 3735336 -68418546 + MIR SINE MIR 3 216 -46 925 191 36 21 chr20 3735336 3735530 -68418352 + MER3 DNA MER1_type 1 197 -12 2374 95 0 0 chr20 3736236 3736530 -68417352 - AluSc SINE Alu -15 294 1 498 251 21 37 chr20 3736548 3736735 -68417147 - L1MC4 LINE L1 -94 7948 7765 406 188 180 23 chr20 3736742 3736870 -68417012 + MER5A DNA MER1_type 39 186 -3 2466 73 0 32 chr20 3736945 3737260 -68416622 + AluSx SINE Alu 1 305 -7 2421 92 0 7 chr20 3737337 3737642 -68416240 - AluSq SINE Alu -10 303 1 2544 239 48 56 chr20 3737653 3738128 -68415754 - L1MC4 LINE L1 -262 7627 7149 2393 77 0 22 chr20 3738128 3738439 -68415443 - AluY SINE Alu -7 304 1 2544 239 48 56 chr20 3738439 3738518 -68415364 - L1MC4 LINE L1 -740 7149 7071 2366 101 3 0 chr20 3738518 3738814 -68415068 - AluSp SINE Alu -16 297 1 2544 239 48 56 chr20 3738814 3739251 -68414631 - L1MC4 LINE L1 -818 7071 6555 1861 141 0 0 chr20 3739251 3739513 -68414369 + AluSx SINE Alu 37 298 -14 2544 239 48 56 chr20 3739513 3739578 -68414304 - L1MC4 LINE L1 -1334 6555 6491 367 233 133 52 chr20 3739589 3739680 -68414202 - L1MC4a LINE L1 -1476 6332 6250 2354 98 0 19 chr20 3739680 3739997 -68413885 - AluSq SINE Alu -2 311 1 2251 110 3 0 chr20 3739999 3740289 -68413593 - AluSg SINE Alu -19 291 1 367 233 133 52 chr20 3740289 3740404 -68413478 - L1MC4a LINE L1 -1558 6250 6106 2207 97 13 26 chr20 3740560 3740869 -68413013 - AluY SINE Alu -6 305 1 1426 178 55 31 chr20 3740871 3741163 -68412719 - AluJo SINE Alu -13 299 1 2585 40 0 13 chr20 3741335 3741634 -68412248 + AluY SINE Alu 1 295 -16 740 167 24 0 chr20 3741670 3741796 -68412086 - FLAM_C SINE Alu -4 129 1 1019 129 0 29 chr20 3741799 3741969 -68411913 - FRAM SINE Alu -1 165 1 2395 100 0 0 chr20 3742475 3742775 -68411107 - AluSx SINE Alu -12 300 1 2304 110 10 0 chr20 3743271 3743581 -68410301 - AluSp SINE Alu 0 313 1 731 221 136 34 chr20 3743585 3743938 -68409944 - L1MC5 LINE L1 -36 7925 7537 1554 132 0 17 chr20 3743956 3744191 -68409691 - AluJb SINE Alu -81 231 1 360 201 132 14 chr20 3744316 3744460 -68409422 - HAL1b LINE L1 -509 839 679 2259 98 3 29 chr20 3744476 3744791 -68409091 - AluSp SINE Alu -4 309 3 2344 151 34 14 chr20 3745006 3745424 -68408458 - MSTB LTR MaLR 0 426 1 2249 129 0 0 chr20 3745796 3746105 -68407777 - AluSx SINE Alu -3 309 1 371 318 13 33 chr20 3746145 3746296 -68407586 + MIR SINE MIR 7 154 -108 261 350 60 26 chr20 3748749 3748983 -68404899 + L2 LINE L2 1759 2000 -1314 413 315 56 53 chr20 3749045 3749347 -68404535 + L2 LINE L2 2244 2546 -768 2350 108 0 0 chr20 3750101 3750396 -68403486 + AluSg SINE Alu 1 295 -15 220 351 77 50 chr20 3751272 3751494 -68402388 - MIR SINE MIR -4 258 31 394 228 61 61 chr20 3751614 3751728 -68402154 - MARNA DNA Mariner -207 379 266 2236 96 0 7 chr20 3751963 3752245 -68401637 + AluSp SINE Alu 21 300 -13 1735 161 18 7 chr20 3752291 3752577 -68401305 - AluJo SINE Alu -23 289 1 239 204 32 32 chr20 3752587 3752680 -68401202 - HAL1b LINE L1 -575 773 681 2261 108 0 14 chr20 3752695 3752991 -68400891 - AluSx SINE Alu -20 292 1 1427 277 68 15 chr20 3754017 3754674 -68399208 + L2 LINE L2 2521 3202 -111 2166 122 0 3 chr20 3755836 3756132 -68397750 - AluJb SINE Alu -5 307 13 1059 183 95 0 chr20 3756493 3756522 -68397360 - L1MD2 LINE L1 -177 6182 6157 222 37 0 0 chr20 3756522 3756549 -68397333 + (TG)n Simple_repeat Simple_repeat 2 28 0 1059 183 95 0 chr20 3756549 3756760 -68397122 - L1MD2 LINE L1 -202 6157 5919 776 145 8 0 chr20 3756928 3757052 -68396830 + FLAM_C SINE Alu 2 126 -7 2418 94 0 0 chr20 3757061 3757358 -68396524 + AluSx SINE Alu 3 299 -13 2377 115 0 3 chr20 3757359 3757672 -68396210 + AluSx SINE Alu 1 312 0 2332 94 3 3 chr20 3759830 3760128 -68393754 + AluSp SINE Alu 1 298 -15 429 269 117 0 chr20 3760574 3760719 -68393163 + L2 LINE L2 2911 3072 -241 1378 235 7 7 chr20 3760734 3760859 -68393023 + AluJo SINE Alu 7 131 -181 685 82 0 0 chr20 3760859 3760957 -68392925 + L1PA4 LINE L1 6054 6151 -4 1378 235 7 7 chr20 3760957 3761125 -68392757 + AluJo SINE Alu 130 300 -12 1903 161 26 0 chr20 3761170 3761474 -68392408 - AluJb SINE Alu 0 312 1 597 259 78 21 chr20 3761478 3761671 -68392211 + L2 LINE L2 3107 3310 -3 431 308 0 17 chr20 3761935 3762136 -68391746 + MIR SINE MIR 13 260 -2 2474 90 0 0 chr20 3762450 3762751 -68391131 - AluSx SINE Alu -11 301 1 2391 66 3 3 chr20 3763000 3763304 -68390578 - AluSc SINE Alu -5 304 1 2114 105 0 3 chr20 3763665 3763960 -68389922 - AluSx SINE Alu -16 296 3 2151 106 3 0 chr20 3764147 3764447 -68389435 + AluSx SINE Alu 1 301 -11 1795 117 19 62 chr20 3764447 3764754 -68389128 + AluSx SINE Alu 1 294 -18 1718 74 0 4 chr20 3764753 3764982 -68388900 + AluSg/x SINE Alu 82 309 -3 * 2124 87 49 0 chr20 3765065 3765353 -68388529 + AluSx SINE Alu 1 302 -10 2378 54 0 14 chr20 3766536 3766831 -68387051 - AluY SINE Alu -20 291 1 2081 102 3 23 chr20 3766836 3767141 -68386741 - AluSx SINE Alu -13 299 1 564 189 90 0 chr20 3767816 3767927 -68385955 + AluJb SINE Alu 158 278 -34 1654 188 3 13 chr20 3768040 3768343 -68385539 - AluJo SINE Alu -12 300 1 1500 143 91 8 chr20 3770012 3770277 -68383605 - AluJo SINE Alu -20 292 6 3130 220 27 48 chr20 3770330 3770570 -68383312 - L1M4 LINE L1 -884 5262 5018 2036 101 0 0 chr20 3770570 3770846 -68383036 - AluSg SINE Alu -11 299 24 3130 220 27 48 chr20 3770846 3770967 -68382915 - L1M4 LINE L1 -1128 5018 4896 1830 124 10 26 chr20 3770967 3771274 -68382608 - AluSq SINE Alu -11 302 1 3130 220 27 48 chr20 3771274 3771564 -68382318 - L1M4 LINE L1 -1250 4896 4632 1862 159 0 7 chr20 3771564 3771865 -68382017 - AluSx SINE Alu -12 300 2 3130 220 27 48 chr20 3771865 3772114 -68381768 - L1M4 LINE L1 -1514 4632 4379 837 189 6 18 chr20 3772114 3772283 -68381599 - AluJb SINE Alu -15 297 131 317 54 0 0 chr20 3772303 3772392 -68381490 + Alu SINE Alu 243 331 0 716 133 88 0 chr20 3772392 3772505 -68381377 - AluJb SINE Alu -188 124 2 345 179 0 0 chr20 3772507 3772574 -68381308 - L1M4 LINE L1 -1763 4383 4317 970 193 0 0 chr20 3772670 3772841 -68381041 - AluJo/FRAM SINE Alu -5 307 137 2251 107 0 0 chr20 3772841 3773150 -68380732 - AluSq SINE Alu -4 309 1 186 43 0 0 chr20 3773599 3773622 -68380260 + (TA)n Simple_repeat Simple_repeat 1 23 0 1863 129 21 0 chr20 3773622 3773901 -68379981 - AluSx SINE Alu -27 285 1 1359 152 104 11 chr20 3773913 3774182 -68379700 - L1MA6 LINE L1 0 6300 6007 1050 205 40 29 chr20 3774224 3774502 -68379380 + L1ME1 LINE L1 5768 6048 -118 2317 73 0 13 chr20 3774619 3774920 -68378962 + AluY SINE Alu 1 297 -14 31 68 0 0 chr20 3775006 3775065 -68378817 + AT_rich Low_complexity Low_complexity 1 59 0 372 304 67 41 chr20 3778093 3778287 -68375595 - MIR SINE MIR -33 229 31 198 0 0 0 chr20 3779630 3779652 -68374230 + (A)n Simple_repeat Simple_repeat 1 22 0 412 228 41 41 chr20 3779847 3779992 -68373890 - L1ME3A LINE L1 -219 5951 5807 2224 96 0 3 chr20 3780005 3780307 -68373575 - AluSx SINE Alu -11 301 1 937 156 0 12 chr20 3780358 3780518 -68373364 + AluSx SINE Alu 1 158 -154 788 180 49 22 chr20 3780541 3780724 -68373158 - MLT1A2 LTR MaLR -179 195 8 277 269 65 87 chr20 3780732 3781007 -68372875 - L1ME3A LINE L1 -1419 4727 4459 537 152 22 0 chr20 3781007 3781099 -68372783 + MLT1A2 LTR MaLR 281 374 0 711 274 151 12 chr20 3781153 3781576 -68372306 + L1ME3A LINE L1 4801 5282 -864 1961 123 17 0 chr20 3781576 3781869 -68372013 + AluSp SINE Alu 1 298 -15 884 99 12 25 chr20 3781893 3782055 -68371827 + (GAAA)n Simple_repeat Simple_repeat 4 163 0 2209 104 0 0 chr20 3782066 3782364 -68371518 + AluSx SINE Alu 1 298 -14 937 245 95 89 chr20 3782366 3782811 -68371071 + L1ME3A LINE L1 5280 5721 -449 1512 144 59 0 chr20 3782811 3783067 -68370815 - AluJo SINE Alu -19 293 23 937 245 95 89 chr20 3783067 3783087 -68370795 + L1ME3A LINE L1 5721 5739 -431 743 191 0 8 chr20 3783087 3783213 -68370669 - FLAM_A SINE Alu -8 125 1 937 245 95 89 chr20 3783213 3783400 -68370482 + L1ME3A LINE L1 5739 5937 -233 2294 88 7 0 chr20 3783643 3783951 -68369931 - AluSp SINE Alu -3 310 1 495 188 91 91 chr20 3784261 3784437 -68369445 + MER69A DNA AcHobo 2 177 0 521 234 0 9 chr20 3785272 3785383 -68368499 + MLT1-int LTR MaLR 772 881 -490 736 216 102 131 chr20 3785469 3785979 -68367903 + MLT1-int LTR MaLR 877 1371 0 1594 217 73 18 chr20 3786008 3786390 -68367492 + MLT1E2 LTR MaLR 215 617 -9 323 239 35 20 chr20 3787996 3788129 -68365753 + MIR SINE MIR 23 146 -62 1933 139 0 0 chr20 3788551 3788838 -68365044 - AluSx SINE Alu -5 307 21 1345 139 9 5 chr20 3788838 3789045 -68364837 + AluJb SINE Alu 93 303 -9 333 229 24 109 chr20 3789204 3789270 -68364612 - L1MC/D LINE L1 -795 5351 5450 2231 97 0 0 chr20 3789270 3789560 -68364322 - AluSx SINE Alu -22 290 1 333 229 24 109 chr20 3789560 3789750 -68364132 - L1MC/D LINE L1 -695 5451 5246 413 152 0 13 chr20 3789762 3789841 -68364041 - AluJ/FRAM SINE Alu -8 304 227 1650 144 62 17 chr20 3790345 3790458 -68363424 + AluJo SINE Alu 6 112 -200 2219 114 0 13 chr20 3790458 3790774 -68363108 + AluSx SINE Alu 1 312 0 1650 144 62 17 chr20 3790774 3790951 -68362931 + AluJo SINE Alu 112 309 -3 205 373 91 18 chr20 3791739 3791849 -68362033 - L2 LINE L2 -16 3256 3139 2158 153 18 0 chr20 3792863 3793204 -68360678 - MER7A DNA MER2_type -1 345 1 1185 164 17 30 chr20 3793228 3793459 -68360423 - AluJo SINE Alu -10 302 75 2145 124 3 0 chr20 3794936 3795242 -68358640 - AluSx SINE Alu -5 307 1 186 305 73 0 chr20 3795543 3795625 -68358257 - MIR SINE MIR -128 134 47 1687 158 0 51 chr20 3798111 3798427 -68355455 + AluJb SINE Alu 1 300 -12 925 118 71 164 chr20 3798846 3799084 -68354798 - MER20 DNA MER1_type -3 216 1 366 343 87 17 chr20 3799266 3799438 -68354444 - MIR3 SINE MIR -16 192 9 2075 109 0 23 chr20 3799845 3800148 -68353734 - AluSg SINE Alu -14 296 1 263 135 19 0 chr20 3800487 3800525 -68353357 + (CA)n Simple_repeat Simple_repeat 2 43 -11 2231 109 0 0 chr20 3800525 3800829 -68353053 - AluSx SINE Alu -6 306 3 263 135 19 0 chr20 3800829 3800842 -68353040 + (CA)n Simple_repeat Simple_repeat 43 54 0 1505 163 43 4 chr20 3800842 3801118 -68352764 - AluJb SINE Alu -25 287 1 299 323 31 10 chr20 3801247 3801343 -68352539 - MER5A DNA MER1_type -52 137 40 1576 166 34 7 chr20 3801906 3802201 -68351681 - AluJo SINE Alu -8 304 2 2236 97 3 0 chr20 3802453 3802752 -68351130 - AluSx SINE Alu -12 300 1 22 0 0 0 chr20 3802920 3802942 -68350940 + AT_rich Low_complexity Low_complexity 1 22 0 1997 140 0 0 chr20 3803335 3803635 -68350247 - AluSx SINE Alu -12 300 1 1881 145 0 32 chr20 3804115 3804425 -68349457 - AluSx SINE Alu -12 300 1 512 100 12 0 chr20 3804519 3804599 -68349283 + (TG)n Simple_repeat Simple_repeat 1 81 0 435 296 66 38 chr20 3805794 3806007 -68347875 + L2 LINE L2 2181 2399 -915 2285 143 117 29 chr20 3806007 3806453 -68347429 - L1MC1 LINE L1 -434 5899 5415 239 303 192 0 chr20 3806570 3806669 -68347213 + L2 LINE L2 3155 3272 0 3410 161 13 75 chr20 3806841 3807136 -68346746 - L1MDb LINE L1 -4471 2069 1758 2377 82 0 0 chr20 3807136 3807440 -68346442 + AluSq SINE Alu 1 304 -9 3410 161 13 75 chr20 3807440 3807502 -68346380 - L1MDb LINE L1 -4782 1758 1694 2066 130 0 0 chr20 3807502 3807794 -68346088 + AluSx SINE Alu 1 292 -20 3410 161 13 75 chr20 3807794 3808215 -68345667 - L1MDb LINE L1 -4846 1694 1249 1927 111 31 7 chr20 3808215 3808504 -68345378 - AluSq SINE Alu -17 296 1 3410 161 13 75 chr20 3808504 3808532 -68345350 - L1MDb LINE L1 -5291 1249 1314 2370 78 3 0 chr20 3808532 3808840 -68345042 - AluY SINE Alu -2 309 1 3410 161 13 75 chr20 3808840 3808927 -68344955 - L1MDb LINE L1 -5225 1315 1224 1445 113 0 74 chr20 3808927 3809183 -68344699 - AluY SINE Alu -14 297 61 621 147 140 7 chr20 3809187 3809323 -68344559 - L1MDb LINE L1 -5342 1198 1045 * 3863 204 72 45 chr20 3809319 3810310 -68343572 - L1MCb LINE L1 -4196 2368 1307 2341 82 0 3 chr20 3810310 3810615 -68343267 - AluSq SINE Alu -9 304 1 3863 204 72 45 chr20 3810615 3811413 -68342469 - L1MCb LINE L1 -5257 1307 532 1011 161 0 0 chr20 3811415 3811577 -68342305 + AluJb SINE Alu 147 308 -4 183 277 218 0 chr20 3812722 3812823 -68341059 + L2 LINE L2 1397 1519 -1795 378 218 69 90 chr20 3812824 3813012 -68340870 + L2 LINE L2 1812 1995 -1319 634 321 156 27 chr20 3813142 3813450 -68340432 + L2 LINE L2 2362 2629 -685 2186 44 0 0 chr20 3813450 3813699 -68340183 - AluY SINE Alu -23 288 40 634 321 156 27 chr20 3813699 3813910 -68339972 + L2 LINE L2 2629 2948 -366 235 292 82 62 chr20 3813987 3814182 -68339700 + L2 LINE L2 3105 3303 -10 512 243 21 0 chr20 3814627 3814767 -68339115 - L1 LINE L1 -898 5248 5106 2153 95 57 0 chr20 3814825 3815108 -68338774 - AluSp SINE Alu -14 299 1 22 0 0 0 chr20 3815136 3815158 -68338724 + AT_rich Low_complexity Low_complexity 1 22 0 303 93 0 0 chr20 3815502 3815545 -68338337 + (TG)n Simple_repeat Simple_repeat 1 43 0 214 261 0 0 chr20 3815646 3815711 -68338171 + A-rich Low_complexity Low_complexity 1 65 0 627 270 176 32 chr20 3816033 3816242 -68337640 - L1ME4a LINE L1 0 6121 5943 519 17 0 0 chr20 3816242 3816302 -68337580 + (CA)n Simple_repeat Simple_repeat 2 61 0 627 270 176 32 chr20 3816302 3816656 -68337226 - L1ME4a LINE L1 -178 5943 5330 1722 139 4 4 chr20 3816679 3816931 -68336951 - AluSq SINE Alu -12 301 50 561 271 101 0 chr20 3816987 3817186 -68336696 - MIR SINE MIR -1 261 43 261 294 134 35 chr20 3817196 3817509 -68336373 + L1MC4a LINE L1 4943 5286 -860 715 46 0 0 chr20 3817517 3817604 -68336278 + AluSc SINE Alu 202 288 -21 2451 225 73 53 chr20 3817662 3818484 -68335398 + L1MC4a LINE L1 5310 6147 -1661 1389 250 21 114 chr20 3818489 3819152 -68334730 + L1M4 LINE L1 1451 2174 -4651 319 77 0 0 chr20 3819152 3819191 -68334691 - U2 snRNA snRNA -149 39 1 1389 250 21 114 chr20 3819191 3819307 -68334575 + L1M4 LINE L1 2174 2343 -4482 2094 100 21 0 chr20 3819307 3819586 -68334296 + AluSx SINE Alu 1 285 -27 1389 250 21 114 chr20 3819586 3819606 -68334276 + L1M4 LINE L1 2343 2363 -4462 33 25 0 0 chr20 3820108 3820148 -68333734 + AT_rich Low_complexity Low_complexity 1 40 0 1236 199 151 19 chr20 3820417 3820729 -68333153 + L1MB8 LINE L1 5825 6177 -1 1493 165 0 89 chr20 3820733 3821048 -68332834 + AluJb SINE Alu 1 287 -25 182 204 136 0 chr20 3821570 3821614 -68332268 + L2 LINE L2 3212 3261 -11 471 60 0 0 chr20 3821786 3821853 -68332029 + (CA)n Simple_repeat Simple_repeat 2 68 0 907 113 8 0 chr20 3821859 3821983 -68331899 + AluJb SINE Alu 1 125 -187 1200 218 5 101 chr20 3822162 3822548 -68331334 + L1MC5 LINE L1 6615 6963 -998 209 135 27 0 chr20 3822548 3822585 -68331297 + (TA)n Simple_repeat Simple_repeat 1 38 0 871 219 36 86 chr20 3822628 3822872 -68331010 + L1MC5 LINE L1 7185 7407 -554 1849 142 35 3 chr20 3822872 3823161 -68330721 + AluSq SINE Alu 1 298 -15 871 219 36 86 chr20 3823161 3823277 -68330605 + L1MC5 LINE L1 7407 7527 -434 264 224 0 0 chr20 3823496 3823576 -68330306 - AluJ/monomer SINE Alu 0 314 235 1091 104 0 14 chr20 3823576 3823720 -68330162 - AluSq/x SINE Alu -170 142 1 488 265 100 9 chr20 3824211 3824389 -68329493 + MIR SINE MIR 40 230 -32 282 119 0 85 chr20 3824447 3824506 -68329376 + L1MC5 LINE L1 6907 6960 -1001 266 132 19 0 chr20 3824508 3824561 -68329321 + (TA)n Simple_repeat Simple_repeat 1 54 0 219 314 118 0 chr20 3824596 3824698 -68329184 - MIR SINE MIR -56 206 93 365 160 56 0 chr20 3824701 3824826 -68329056 + (TA)n Simple_repeat Simple_repeat 2 133 0 1388 172 76 8 chr20 3825025 3825287 -68328595 + AluJb SINE Alu 1 280 -32 263 322 35 0 chr20 3825751 3825838 -68328044 - MIR SINE MIR -114 148 59 2141 125 10 0 chr20 3826954 3827250 -68326632 + AluSx SINE Alu 1 299 -13 469 286 71 36 chr20 3827260 3827540 -68326342 - L1M4 LINE L1 -2201 3945 3656 2106 101 25 0 chr20 3827689 3827965 -68325917 - AluSx SINE Alu -15 297 15 2117 103 3 3 chr20 3828851 3829158 -68324724 + AluSx SINE Alu 1 307 0 200 148 0 66 chr20 3829292 3829353 -68324529 + (TTTTTA)n Simple_repeat Simple_repeat 2 58 0 604 129 0 69 chr20 3829357 3829458 -68324424 - AluSp/q SINE Alu -17 296 203 1354 157 14 5 chr20 3829458 3829674 -68324208 + AluJo SINE Alu 71 288 -24 29 0 0 0 chr20 3829674 3829703 -68324179 + AT_rich Low_complexity Low_complexity 1 29 0 373 241 88 122 chr20 3829703 3829950 -68323932 - HAL1b LINE L1 -840 508 271 2095 128 0 7 chr20 3829950 3830247 -68323635 - AluSx SINE Alu -17 295 1 373 241 88 122 chr20 3830247 3830294 -68323588 - HAL1b LINE L1 -1077 271 224 611 261 13 7 chr20 3830338 3830491 -68323391 + L1MC4 LINE L1 6701 6854 -1188 839 216 28 0 chr20 3830618 3830794 -68323088 + MER58A DNA MER1_type 42 222 -2 323 254 8 75 chr20 3831561 3831695 -68322187 - HAL1 LINE L1 -4 2503 2379 855 94 0 0 chr20 3831697 3831803 -68322079 + U6 snRNA snRNA 1 106 -1 21 0 0 0 chr20 3831804 3831825 -68322057 + AT_rich Low_complexity Low_complexity 1 21 0 441 248 99 0 chr20 3831825 3831986 -68321896 - HAL1 LINE L1 -115 2392 2216 534 193 0 0 chr20 3831994 3832077 -68321805 - AluJ/FLAM SINE Alu -228 84 2 317 299 84 26 chr20 3834014 3834168 -68319714 - HAL1 LINE L1 -345 2162 2000 740 172 147 73 chr20 3834210 3834414 -68319468 - MER20 DNA MER1_type 0 219 1 333 218 142 81 chr20 3834457 3834608 -68319274 - HAL1 LINE L1 -674 1833 1693 2328 103 0 0 chr20 3834608 3834910 -68318972 + AluSx SINE Alu 1 302 -10 333 218 142 81 chr20 3834910 3834931 -68318951 - HAL1 LINE L1 -814 1693 1675 216 0 0 0 chr20 3834931 3834955 -68318927 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 333 218 142 81 chr20 3834955 3834978 -68318904 - HAL1 LINE L1 -832 1675 1625 1232 126 0 0 chr20 3834979 3835153 -68318729 + AluSg/x SINE Alu 137 310 -2 21 36 0 0 chr20 3835193 3835221 -68318661 + AT_rich Low_complexity Low_complexity 1 28 0 980 109 13 26 chr20 3835232 3835388 -68318494 + BC200 scRNA scRNA 1 154 -46 3321 219 65 70 chr20 3835417 3835632 -68318250 - L1MEc LINE L1 -5217 1179 964 863 154 0 8 chr20 3835632 3835762 -68318120 - FLAM_A SINE Alu -4 129 1 3321 219 65 70 chr20 3835762 3836192 -68317690 - L1MEc LINE L1 -5432 964 533 15521 120 25 53 chr20 3836192 3836593 -68317289 - Tigger1 DNA MER2_type 0 2418 2007 1492 166 18 109 chr20 3836593 3836931 -68316951 - AluJo SINE Alu 0 312 6 15521 120 25 53 chr20 3836931 3837035 -68316847 - Tigger1 DNA MER2_type -411 2007 1902 315 0 0 0 chr20 3837035 3837070 -68316812 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 2270 87 0 0 chr20 3837076 3837353 -68316529 - AluSx SINE Alu -35 277 1 15521 120 25 53 chr20 3837353 3838304 -68315578 - Tigger1 DNA MER2_type -521 1897 1050 2070 136 0 13 chr20 3838304 3838620 -68315262 + AluJb SINE Alu 1 312 0 15521 120 25 53 chr20 3838620 3839642 -68314240 - Tigger1 DNA MER2_type -1368 1050 1 3321 219 65 70 chr20 3839642 3840034 -68313848 - L1MEc LINE L1 -5863 533 146 2425 53 3 23 chr20 3840177 3840479 -68313403 - AluY SINE Alu -15 296 1 1915 123 20 3 chr20 3840513 3840805 -68313077 + AluSq SINE Alu 1 297 -16 389 251 105 111 chr20 3840805 3841042 -68312840 - HAL1 LINE L1 -1068 1439 1202 2125 118 3 3 chr20 3841042 3841338 -68312544 - AluSx SINE Alu -16 296 1 389 251 105 111 chr20 3841338 3841749 -68312133 - HAL1 LINE L1 -1305 1202 795 1404 134 79 66 chr20 3841903 3842077 -68311805 - AluJo SINE Alu -3 309 128 2242 106 0 0 chr20 3842077 3842369 -68311513 - AluSc SINE Alu -17 292 1 1404 134 79 66 chr20 3842369 3842499 -68311383 - AluJo SINE Alu -184 128 1 2697 23 0 3 chr20 3842995 3843303 -68310579 - AluY SINE Alu -3 308 2 826 263 62 9 chr20 3844320 3844544 -68309338 + MIR SINE MIR 8 243 -19 34 42 0 0 chr20 3844558 3844606 -68309276 + AT_rich Low_complexity Low_complexity 1 48 0 200 182 0 0 chr20 3845348 3845381 -68308501 + (TGGG)n Simple_repeat Simple_repeat 3 35 0 246 243 14 14 chr20 3846964 3847034 -68306848 + L1M4 LINE L1 4959 5028 -1118 2081 116 42 0 chr20 3847239 3847524 -68306358 + AluSx SINE Alu 1 297 -15 4624 137 52 43 chr20 3848115 3848444 -68305438 - MER4D LTR ERV1 0 865 541 2417 78 0 19 chr20 3848444 3848752 -68305130 + AluSg SINE Alu 1 302 -8 4624 137 52 43 chr20 3848752 3849121 -68304761 - MER4D LTR ERV1 -324 541 194 1825 151 27 7 chr20 3849121 3849419 -68304463 - AluJb SINE Alu -8 304 1 4624 137 52 43 chr20 3849419 3849615 -68304267 - MER4D LTR ERV1 -671 194 1 1758 120 84 4 chr20 3850996 3851270 -68302612 + AluSg SINE Alu 6 301 -9 2158 113 17 0 chr20 3851440 3851741 -68302141 + AluSx SINE Alu 1 306 -6 1474 148 14 0 chr20 3852073 3852289 -68301593 - MER20 DNA MER1_type 0 219 1 333 228 73 32 chr20 3853615 3853738 -68300144 - L2 LINE L2 -41 3272 3145 420 149 138 0 chr20 3854293 3854380 -68299502 - L1M4 LINE L1 -2472 3674 3576 2051 82 78 4 chr20 3854933 3855214 -68298668 - AluSx SINE Alu -10 302 1 2093 118 17 3 chr20 3855460 3855756 -68298126 - AluSx SINE Alu -12 300 1 1130 200 33 9 chr20 3855890 3856100 -68297782 + U3 snRNA snRNA 1 215 -2 914 126 0 30 chr20 3856198 3856333 -68297549 - FLAM_A SINE Alu -1 132 2 4944 228 43 41 chr20 3856352 3857086 -68296796 + L1MC/D LINE L1 3725 4456 -1786 1531 151 4 54 chr20 3857086 3857365 -68296517 - AluJo SINE Alu -19 293 29 4944 228 43 41 chr20 3857365 3857669 -68296213 + L1MC/D LINE L1 4456 4758 -1484 766 202 16 0 chr20 3857669 3857798 -68296084 + FLAM_A SINE Alu 1 131 -2 4944 228 43 41 chr20 3857798 3858669 -68295213 + L1MC/D LINE L1 4758 5548 -694 3036 214 36 0 chr20 3858652 3859368 -68294514 + L1MB2 LINE L1 4468 5209 -937 * 4199 140 39 92 chr20 3859372 3859422 -68294460 + L1MB2 LINE L1 5282 5333 -838 1716 148 6 81 chr20 3859422 3859754 -68294128 + AluJo SINE Alu 1 307 -5 4199 140 39 92 chr20 3859754 3860620 -68293262 + L1MB2 LINE L1 5333 6150 -21 1393 138 0 9 chr20 3860621 3860831 -68293051 - AluSq SINE Alu -4 309 102 1774 151 7 21 chr20 3860832 3861111 -68292771 - AluJb SINE Alu -37 275 1 869 164 0 15 chr20 3861147 3861281 -68292601 + FLAM_C SINE Alu 2 133 0 739 275 55 55 chr20 3861282 3861415 -68292467 + L1MC4 LINE L1 7552 7684 -358 2266 115 0 0 chr20 3861415 3861719 -68292163 + AluSx SINE Alu 1 304 -8 739 275 55 55 chr20 3861719 3862033 -68291849 + L1MC4 LINE L1 7684 8002 -40 2158 109 20 0 chr20 3862033 3862326 -68291556 - AluSx SINE Alu -13 299 1 739 275 55 55 chr20 3862326 3862368 -68291514 + L1MC4 LINE L1 8001 8042 0 291 247 0 21 chr20 3862978 3863075 -68290807 - L1ME4a LINE L1 -49 6072 5978 2385 93 6 0 chr20 3863229 3863540 -68290342 - AluSp SINE Alu 0 313 1 1345 173 112 29 chr20 3863571 3863849 -68290033 + AluJo SINE Alu 1 301 -11 263 303 53 61 chr20 3864083 3864215 -68289667 - MIR3 SINE MIR -73 135 5 313 250 48 32 chr20 3864655 3864779 -68289103 - L1MC4a LINE L1 -1879 5929 5804 244 0 0 0 chr20 3864828 3864855 -68289027 + (TTTA)n Simple_repeat Simple_repeat 2 160 0 714 130 0 0 chr20 3864855 3864955 -68288927 - AluSg/x SINE Alu -1 308 183 1423 161 32 28 chr20 3864955 3865203 -68288679 + AluJb SINE Alu 64 312 0 575 290 20 20 chr20 3865236 3865436 -68288446 - L1MC4a LINE L1 -2035 5773 5574 366 312 92 44 chr20 3865581 3865717 -68288165 - L1MC4a LINE L1 -757 5389 5261 2204 113 3 3 chr20 3865717 3866017 -68287865 + AluSq SINE Alu 1 300 -13 366 312 92 44 chr20 3866017 3866130 -68287752 - L1MC4a LINE L1 -885 5261 5128 2757 29 0 13 chr20 3866617 3866932 -68286950 - AluY SINE Alu 0 311 1 2065 145 10 0 chr20 3866937 3867241 -68286641 - AluSx SINE Alu -5 307 1 254 269 133 23 chr20 3867248 3867504 -68286378 - L1MC4a LINE L1 -1481 4665 4382 2451 114 28 19 chr20 3867516 3867877 -68286005 + THE1B LTR MaLR 1 364 0 595 254 207 65 chr20 3868024 3868626 -68285256 - L2 LINE L2 0 3313 2622 1926 161 0 3 chr20 3868626 3868924 -68284958 + AluJb SINE Alu 1 297 -15 595 254 207 65 chr20 3868924 3868961 -68284921 - L2 LINE L2 -691 2622 2592 2484 90 0 0 chr20 3868968 3869279 -68284603 - AluY SINE Alu 0 311 1 260 309 157 20 chr20 3869414 3869618 -68284264 - L1MC4a LINE L1 -2293 3853 3622 354 234 43 11 chr20 3870010 3870104 -68283778 + MLT1K LTR MaLR 492 588 0 274 284 38 71 chr20 3870117 3870328 -68283554 + L1MC4 LINE L1 7838 8041 -1 2183 113 30 0 chr20 3870868 3871169 -68282713 - AluSg SINE Alu 0 310 1 445 241 65 121 chr20 3871243 3871475 -68282407 + MLT1J LTR MaLR 156 374 -137 1148 157 7 117 chr20 3871891 3872191 -68281691 + L1MD3 LINE L1 7719 7985 -10 2139 108 24 3 chr20 3872865 3873161 -68280721 - AluSx SINE Alu -10 302 1 961 181 101 21 chr20 3873622 3873860 -68280022 - HAL1 LINE L1 -787 1720 1464 1656 148 75 35 chr20 3873919 3874241 -68279641 - L1MA8 LINE L1 0 6291 5951 1575 161 0 23 chr20 3874241 3874501 -68279381 - AluJo SINE Alu -14 298 45 1656 148 75 35 chr20 3874501 3874549 -68279333 - L1MA8 LINE L1 -340 5951 5906 333 256 83 16 chr20 3874539 3874660 -68279222 - HAL1 LINE L1 -1106 1401 1273 * 300 261 89 9 chr20 3874660 3874840 -68279042 + L2 LINE L2 539 793 -2521 1618 225 133 43 chr20 3874845 3875467 -68278415 + L2 LINE L2 1154 1831 -1483 700 127 9 9 chr20 3875485 3875595 -68278287 - FLAM_A SINE Alu -14 128 19 376 205 0 13 chr20 3875618 3875696 -68278186 + L2 LINE L2 1865 1941 -1373 2273 100 0 20 chr20 3875696 3875997 -68277885 - AluSq SINE Alu -18 295 1 328 206 0 15 chr20 3876075 3876143 -68277739 - HAL1 LINE L1 -925 1582 1516 218 128 26 0 chr20 3876156 3876195 -68277687 + L2 LINE L2 2412 2451 -863 202 270 128 40 chr20 3876232 3876380 -68277502 + L2 LINE L2 3119 3279 -34 713 328 136 3 chr20 3876501 3876861 -68277021 - MLT1I LTR MaLR -1 408 1 29 70 0 0 chr20 3879299 3879356 -68274526 + GC_rich Low_complexity Low_complexity 1 57 0 203 61 30 0 chr20 3879356 3879389 -68274493 + (CGGGGG)n Simple_repeat Simple_repeat 5 38 0 185 130 43 0 chr20 3879629 3879675 -68274207 + (CCCCG)n Simple_repeat Simple_repeat 1 48 0 2295 78 7 0 chr20 3880647 3880942 -68272940 - AluSx SINE Alu -15 297 1 2162 114 13 3 chr20 3880942 3881249 -68272633 - AluSx SINE Alu -2 310 1 657 209 0 0 chr20 3881639 3881749 -68272133 + FLAM_A SINE Alu 7 116 -26 267 137 27 27 chr20 3881764 3881837 -68272045 + (TA)n Simple_repeat Simple_repeat 1 73 0 1093 168 0 0 chr20 3881845 3882018 -68271864 + AluJb SINE Alu 127 299 -13 4225 171 31 28 chr20 3882024 3882751 -68271131 - L1MB7 LINE L1 -82 6102 5363 2609 65 3 0 chr20 3882751 3883058 -68270824 - AluSp SINE Alu -5 308 1 4225 171 31 28 chr20 3883058 3883575 -68270307 - L1MB7 LINE L1 -821 5363 4849 2170 122 3 0 chr20 3884561 3884857 -68269025 - AluSq SINE Alu -16 297 1 1595 179 26 29 chr20 3884944 3885257 -68268625 + AluJo SINE Alu 1 312 0 1946 145 20 7 chr20 3885578 3885881 -68268001 - AluSx SINE Alu -5 307 1 330 143 18 0 chr20 3886159 3886215 -68267667 - MSTA LTR MaLR 0 428 372 553 31 0 0 chr20 3886249 3886313 -68267569 - MSTA LTR MaLR -40 388 325 * 2596 99 63 5 chr20 3886292 3886686 -68267196 - MSTA LTR MaLR -11 417 1 6323 159 7 22 chr20 3886691 3887748 -68266134 - MSTA-int LTR MaLR -6 1645 605 1358 157 0 0 chr20 3887748 3887946 -68265936 - AluSq SINE Alu -115 198 1 3592 162 0 0 chr20 3887947 3888542 -68265340 - MSTA-int LTR MaLR -1026 568 1 2608 115 66 5 chr20 3888552 3888944 -68264938 - MSTA LTR MaLR -12 416 1 391 132 146 62 chr20 3889171 3889315 -68264567 - MER53 DNA DNA -33 156 1 2214 117 0 0 chr20 3889383 3889674 -68264208 + AluSg SINE Alu 1 291 -19 2524 198 71 94 chr20 3889688 3889858 -68264024 - L1ME2 LINE L1 0 6164 5992 312 27 0 0 chr20 3889858 3889895 -68263987 + (CA)n Simple_repeat Simple_repeat 2 38 0 2524 198 71 94 chr20 3889895 3889953 -68263929 - L1ME2 LINE L1 -172 5992 5934 1986 157 0 10 chr20 3889953 3890258 -68263624 - AluJo SINE Alu -10 302 1 2524 198 71 94 chr20 3890258 3890678 -68263204 - L1ME2 LINE L1 -230 5934 5506 2312 105 3 3 chr20 3890678 3890983 -68262899 + AluSx SINE Alu 3 307 -5 2524 198 71 94 chr20 3890983 3891324 -68262558 - L1ME2 LINE L1 -658 5506 5201 2244 111 0 3 chr20 3891324 3891621 -68262261 - AluSq SINE Alu -6 307 12 2524 198 71 94 chr20 3891621 3891704 -68262178 - L1ME2 LINE L1 -963 5201 5118 349 224 41 10 chr20 3892011 3892024 -68261858 - MIR SINE MIR -71 191 180 2571 190 43 24 chr20 3892024 3892556 -68261326 + MLT1F LTR MaLR 1 542 0 349 224 41 10 chr20 3892556 3892640 -68261242 - MIR SINE MIR -82 180 91 768 168 0 28 chr20 3892709 3892845 -68261037 + FLAM_C SINE Alu 2 135 -177 2546 65 0 0 chr20 3892845 3893139 -68260743 - AluSq SINE Alu -19 294 1 39 31 0 16 chr20 3893145 3893182 -68260700 + AT_rich Low_complexity Low_complexity 1 38 -25 1652 166 0 18 chr20 3893182 3893459 -68260423 + AluJb SINE Alu 15 286 -26 39 31 0 16 chr20 3893459 3893485 -68260397 + AT_rich Low_complexity Low_complexity 38 63 0 186 291 55 0 chr20 3893667 3893722 -68260160 - MIR SINE MIR -195 67 10 3009 145 8 22 chr20 3894029 3894539 -68259343 + L1PB4 LINE L1 5654 6156 0 355 193 40 40 chr20 3894541 3894717 -68259165 + (TATAA)n Simple_repeat Simple_repeat 1 176 0 218 100 67 0 chr20 3894765 3894825 -68259057 + (TA)n Simple_repeat Simple_repeat 2 65 0 1286 230 65 25 chr20 3894885 3895207 -68258675 + LTR16C LTR ERVL 139 473 -18 2315 103 6 0 chr20 3895383 3895694 -68258188 + AluSp SINE Alu 1 313 0 2278 94 17 0 chr20 3895821 3896118 -68257764 + AluSx SINE Alu 1 302 -10 1497 85 60 0 chr20 3896184 3896383 -68257499 + AluSq SINE Alu 81 291 -22 692 249 16 104 chr20 3896384 3896550 -68257332 + L1MA9 LINE L1 5942 6060 -252 1775 174 7 0 chr20 3896550 3896837 -68257045 - AluJb SINE Alu -23 289 1 692 249 16 104 chr20 3896837 3897035 -68256847 + L1MA9 LINE L1 6060 6274 -38 492 239 107 89 chr20 3897048 3897155 -68256727 + L1ME LINE L1 5328 5432 -689 2300 84 10 7 chr20 3897155 3897451 -68256431 + AluSg SINE Alu 1 297 -13 492 239 107 89 chr20 3897451 3897618 -68256264 + L1ME LINE L1 5432 5595 -526 680 142 0 101 chr20 3897618 3897766 -68256116 + AluJ SINE Alu 1 133 -169 492 239 107 89 chr20 3897766 3897815 -68256067 + L1ME LINE L1 5595 5642 -479 1624 174 50 4 chr20 3897815 3898096 -68255786 + AluJb SINE Alu 1 294 -18 492 239 107 89 chr20 3898096 3898164 -68255718 + L1ME LINE L1 5642 5727 -394 21 0 0 0 chr20 3898353 3898374 -68255508 + AT_rich Low_complexity Low_complexity 1 21 0 32 0 0 0 chr20 3898472 3898504 -68255378 + AT_rich Low_complexity Low_complexity 1 32 0 1818 180 0 7 chr20 3898505 3898794 -68255088 - AluJo SINE Alu -25 287 1 1879 186 95 3 chr20 3899014 3899384 -68254498 - MER41D LTR ERV1 -9 548 145 517 137 147 0 chr20 3899384 3899479 -68254403 + AluJ SINE Alu 120 228 -84 2279 105 0 0 chr20 3899497 3899801 -68254081 - AluSc SINE Alu -5 304 1 291 100 0 0 chr20 3899813 3899853 -68254029 - MER41D LTR ERV1 -417 140 101 537 132 0 0 chr20 3899858 3899934 -68253948 - AluSq SINE Alu -153 160 85 1180 124 0 0 chr20 3899934 3900095 -68253787 - AluSx SINE Alu -133 179 19 499 133 0 0 chr20 3900096 3900171 -68253711 - MER41D LTR ERV1 -482 75 1 314 326 54 45 chr20 3900173 3900300 -68253582 + L1ME LINE L1 5347 5478 -643 1835 106 35 77 chr20 3900300 3900611 -68253271 + AluSx SINE Alu 1 298 -14 314 326 54 45 chr20 3900611 3900725 -68253157 + L1ME LINE L1 5478 5590 -531 656 274 5 53 chr20 3900968 3901176 -68252706 - MLT1J LTR MaLR -228 283 86 1023 118 0 0 chr20 3901221 3901356 -68252526 + AluSq/x SINE Alu 1 135 -178 2106 134 0 7 chr20 3901356 3901661 -68252221 + AluSx SINE Alu 1 303 -9 2919 82 31 11 chr20 3901753 3902212 -68251670 - MER1A DNA MER1_type 0 529 25 963 223 54 132 chr20 3902209 3902693 -68251189 + LTR16A1 LTR ERVL 12 457 0 * 244 286 104 49 chr20 3902801 3903087 -68250795 + MLT1I LTR MaLR 1 334 -215 2445 57 0 0 chr20 3903230 3903536 -68250346 + AluY SINE Alu 1 306 0 559 293 61 26 chr20 3904355 3904636 -68249246 + LTR16A LTR ERVL 1 360 -90 830 149 97 0 chr20 3904675 3904809 -68249073 - AluJb SINE Alu -25 287 141 248 284 84 0 chr20 3904920 3905015 -68248867 + HAL1 LINE L1 17 119 -2388 1768 189 0 10 chr20 3905048 3905344 -68248538 + AluJo SINE Alu 1 293 -19 274 225 0 28 chr20 3905344 3905415 -68248467 + L1MC3 LINE L1 5868 5936 -1872 1122 144 29 0 chr20 3906151 3906325 -68247557 - AluSg/x SINE Alu 0 312 134 1202 271 60 2 chr20 3906326 3906708 -68247174 - L1MC4 LINE L1 -533 7509 7101 2102 145 0 0 chr20 3906708 3907011 -68246871 - AluSx SINE Alu -9 303 1 1202 271 60 2 chr20 3907011 3907030 -68246852 - L1MC4 LINE L1 -941 7101 7085 951 139 0 14 chr20 3907044 3907188 -68246694 + FLAM_C SINE Alu 1 142 -1 815 204 0 0 chr20 3907231 3907368 -68246514 - FRAM SINE Alu -26 150 14 418 216 36 0 chr20 3907386 3907497 -68246385 - L1MC4 LINE L1 -968 7074 6960 855 148 0 8 chr20 3908188 3908316 -68245566 + FLAM_C SINE Alu 1 127 -16 434 261 54 0 chr20 3908334 3908445 -68245437 + HAL1 LINE L1 10 126 -2381 1934 145 0 39 chr20 3908500 3908810 -68245072 + AluJb SINE Alu 1 298 -14 255 231 0 0 chr20 3909185 3909237 -68244645 + LTR37B LTR ERV1 233 284 -184 423 0 0 0 chr20 3909295 3909342 -68244540 + (CA)n Simple_repeat Simple_repeat 2 48 0 2603 40 10 0 chr20 3909345 3909642 -68244240 - AluY SINE Alu -11 300 1 1283 135 60 71 chr20 3909642 3909691 -68244191 - MER41D LTR ERV1 -294 263 215 2281 122 0 0 chr20 3909691 3909995 -68243887 - AluSx SINE Alu -8 304 1 1283 135 60 71 chr20 3909995 3910211 -68243671 - MER41D LTR ERV1 -342 215 1 234 243 27 40 chr20 3910212 3910286 -68243596 + HAL1 LINE L1 1316 1388 -1119 1946 143 3 3 chr20 3910287 3910573 -68243309 + AluJo SINE Alu 1 286 -26 324 70 0 0 chr20 3910574 3910617 -68243265 + (CA)n Simple_repeat Simple_repeat 2 44 0 2933 185 141 121 chr20 3910617 3911198 -68242684 + L1MC3 LINE L1 6542 7110 -675 329 216 52 72 chr20 3911198 3911295 -68242587 + MLT1F1 LTR MaLR 39 133 -434 2933 185 141 121 chr20 3911295 3911798 -68242084 + L1MC3 LINE L1 7110 7745 -40 180 0 0 0 chr20 3911798 3911818 -68242064 + (T)n Simple_repeat Simple_repeat 1 20 0 579 253 0 39 chr20 3911911 3912065 -68241817 - L2 LINE L2 -1 3312 3165 205 363 25 0 chr20 3912035 3912115 -68241767 - L2 LINE L2 -646 2668 2587 * 6428 63 32 76 chr20 3912116 3913542 -68240340 - SVA Other Other -645 1384 342 518 122 0 0 chr20 3913557 3913631 -68240251 - AluJb SINE Alu -187 125 52 1962 138 7 17 chr20 3913640 3913936 -68239946 - AluJo SINE Alu -19 293 1 454 211 45 23 chr20 3913988 3914121 -68239761 + HAL1 LINE L1 1392 1527 -980 330 263 42 94 chr20 3914255 3914468 -68239414 + HAL1 LINE L1 2112 2313 -194 201 200 73 0 chr20 3914548 3914603 -68239279 + (TCTA)n Simple_repeat Simple_repeat 4 62 0 2131 90 72 0 chr20 3914775 3915054 -68238828 + AluSq SINE Alu 1 299 -14 265 256 44 15 chr20 3915486 3915623 -68238259 + L1MEd LINE L1 796 936 -5269 264 159 71 40 chr20 3915790 3915916 -68237966 + (TTATA)n Simple_repeat Simple_repeat 4 133 0 1728 173 3 0 chr20 3916044 3916328 -68237554 + AluJo SINE Alu 12 296 -16 447 331 69 38 chr20 3916335 3916570 -68237312 + L1MEd LINE L1 1663 1889 -4507 2181 112 0 20 chr20 3916570 3916875 -68237007 + AluSc SINE Alu 1 299 -10 447 331 69 38 chr20 3916875 3917157 -68236725 + L1MEd LINE L1 1889 2200 -4196 862 122 0 43 chr20 3917157 3917296 -68236586 + FLAM_C SINE Alu 1 133 0 447 331 69 38 chr20 3917296 3917311 -68236571 + L1MEd LINE L1 2200 2213 -4183 412 285 16 48 chr20 3917323 3917347 -68236535 + L1MEd LINE L1 2467 2490 -3725 1847 156 21 14 chr20 3917347 3917635 -68236247 + AluSx SINE Alu 1 290 -22 412 285 16 48 chr20 3917635 3917796 -68236086 + L1MEd LINE L1 2490 2646 -3569 951 293 81 7 chr20 3918013 3918471 -68235411 + L1MEd LINE L1 3213 3704 -2511 267 258 105 72 chr20 3918496 3918550 -68235332 + L1M4 LINE L1 4704 4755 -1391 1616 175 0 53 chr20 3918550 3918853 -68235029 + AluJb SINE Alu 3 289 -23 267 258 105 72 chr20 3918853 3919007 -68234875 + L1M4 LINE L1 4755 4919 -1227 314 279 137 6 chr20 3919007 3919168 -68234714 - LTR33A LTR ERVL -50 473 292 226 303 90 48 chr20 3919239 3919427 -68234455 - LTR50 LTR ERVL -564 231 36 484 254 88 82 chr20 3919433 3919573 -68234309 + L1M4 LINE L1 4925 5063 -1083 2292 105 0 0 chr20 3919573 3919869 -68234013 - AluSx SINE Alu -16 296 1 484 254 88 82 chr20 3919869 3919949 -68233933 + L1M4 LINE L1 5063 5141 -1005 2044 89 31 21 chr20 3919949 3920240 -68233642 - AluSp SINE Alu -19 294 1 828 139 31 0 chr20 3920246 3920375 -68233507 - FLAM_C SINE Alu 0 133 1 484 254 88 82 chr20 3920375 3920488 -68233394 + L1M4 LINE L1 5145 5268 -878 2360 113 0 0 chr20 3920554 3920863 -68233019 - AluSx SINE Alu -3 309 1 291 161 0 18 chr20 3920896 3920952 -68232930 + AluSp/q SINE Alu 242 296 -7 258 232 0 0 chr20 3920953 3921009 -68232873 + HAL1 LINE L1 2312 2367 -140 242 246 35 0 chr20 3921045 3921102 -68232780 + CT-rich Low_complexity Low_complexity 2 60 0 1098 198 9 9 chr20 3921102 3921314 -68232568 - AluJb SINE Alu -17 295 84 263 280 0 0 chr20 3921314 3921389 -68232493 + HAL1 LINE L1 2432 2506 -1 2034 96 0 32 chr20 3921539 3921819 -68232063 + AluSx SINE Alu 26 296 -16 453 301 29 21 chr20 3921825 3922104 -68231778 + L1M4 LINE L1 4754 5034 -1112 2498 76 3 0 chr20 3922508 3922809 -68231073 - AluSc SINE Alu -7 302 1 1655 145 48 7 chr20 3922819 3923110 -68230772 - AluJo SINE Alu 0 304 3 296 311 47 14 chr20 3923111 3923259 -68230623 + MLT1K LTR MaLR 421 573 -15 1587 185 16 53 chr20 3923420 3923739 -68230143 + AluJb SINE Alu 1 307 -5 483 252 14 84 chr20 3923917 3924131 -68229751 - MLT1K LTR MaLR -66 522 324 607 311 102 68 chr20 3924146 3924635 -68229247 - MLT1K LTR MaLR -8 580 75 1269 244 79 16 chr20 3924860 3925290 -68228592 - LTR16A1 LTR ERVL 0 457 1 1804 174 20 103 chr20 3925362 3925412 -68228470 - L1MA9 LINE L1 -38 6274 6221 1591 99 41 0 chr20 3925412 3925633 -68228249 + MER30 DNA MER1_type 1 230 0 1804 174 20 103 chr20 3925633 3925934 -68227948 - L1MA9 LINE L1 -91 6221 5973 1716 181 4 4 chr20 3925934 3926215 -68227667 - AluJb SINE Alu -31 281 1 1804 174 20 103 chr20 3926215 3926355 -68227527 - L1MA9 LINE L1 -339 5973 5823 701 154 8 0 chr20 3926355 3926472 -68227410 - FLAM_C SINE Alu -2 141 24 1864 234 64 21 chr20 3926606 3927076 -68226806 + LTR16C LTR ERVL 1 490 -1 24 53 0 0 chr20 3927182 3927220 -68226662 + AT_rich Low_complexity Low_complexity 1 38 0 294 154 0 0 chr20 3927302 3927354 -68226528 + U5 snRNA snRNA 1 52 -64 1984 118 4 0 chr20 3927375 3927647 -68226235 + AluSx SINE Alu 1 273 -39 556 219 7 7 chr20 3927647 3927802 -68226080 + GA-rich Low_complexity Low_complexity 2 156 0 2378 91 3 0 chr20 3927930 3928227 -68225655 + AluSx SINE Alu 1 298 -14 570 266 81 9 chr20 3928840 3929062 -68224820 - MIR SINE MIR -6 256 19 213 322 11 33 chr20 3929163 3929253 -68224629 + MIR SINE MIR 33 120 -88 1244 181 109 26 chr20 3929850 3929951 -68223931 + AluJb SINE Alu 1 92 -220 228 67 0 0 chr20 3929951 3929981 -68223901 + (CAA)n Simple_repeat Simple_repeat 2 31 0 1244 181 109 26 chr20 3929981 3930144 -68223738 + AluJb SINE Alu 92 287 -25 188 183 0 33 chr20 3930145 3930205 -68223677 + (CATA)n Simple_repeat Simple_repeat 2 59 0 239 328 0 0 chr20 3930441 3930508 -68223374 + L2 LINE L2 3107 3173 -99 2087 121 0 0 chr20 3930728 3931059 -68222823 - AluSx SINE Alu 0 331 1 456 19 0 0 chr20 3931233 3931286 -68222596 + (TG)n Simple_repeat Simple_repeat 1 53 0 2035 123 0 46 chr20 3932020 3932136 -68221746 - AluSq SINE Alu -2 311 191 2503 60 3 0 chr20 3932136 3932436 -68221446 - AluY SINE Alu -10 301 1 2035 123 0 46 chr20 3932436 3932645 -68221237 - AluSq SINE Alu -122 191 1 1217 261 164 3 chr20 3932910 3933300 -68220582 + LTR16B LTR ERVL 1 453 -11 904 261 20 0 chr20 3933314 3933513 -68220369 - MER63A DNA MER1_type -7 203 1 493 228 35 48 chr20 3933513 3933658 -68220224 + L1ME LINE L1 5642 5784 -386 883 181 44 0 chr20 3933677 3933837 -68220045 - AluJo/FRAM SINE Alu -12 300 134 1613 176 7 29 chr20 3933837 3934143 -68219739 - AluJo SINE Alu -13 299 1 2191 119 3 0 chr20 3934151 3934446 -68219436 - AluSx SINE Alu -16 296 1 2056 152 3 0 chr20 3934446 3934769 -68219113 - L1M3 LINE L1 -374 5797 5474 677 173 8 31 chr20 3934770 3934897 -68218985 - FLAM_A SINE Alu -5 128 5 2281 109 0 10 chr20 3934929 3935233 -68218649 - AluSx SINE Alu -11 301 1 285 265 20 10 chr20 3935300 3935398 -68218484 + L2 LINE L2 3215 3313 0 1209 182 146 77 chr20 3935428 3935534 -68218348 + MLT1D LTR MaLR 1 98 -407 2226 101 7 13 chr20 3935534 3935840 -68218042 + AluSx SINE Alu 2 305 -7 1209 182 146 77 chr20 3935840 3936151 -68217731 + MLT1D LTR MaLR 98 447 -58 1022 179 0 0 chr20 3936373 3936541 -68217341 + FAM SINE Alu 4 171 -4 216 0 0 0 chr20 3936605 3936629 -68217253 + (T)n Simple_repeat Simple_repeat 1 24 0 315 283 10 20 chr20 3936725 3936824 -68217058 + L1M4 LINE L1 2260 2357 -3789 272 222 25 0 chr20 3937126 3937207 -68216675 + CT-rich Low_complexity Low_complexity 4 86 0 413 180 90 0 chr20 3937410 3937499 -68216383 + MLT1D LTR MaLR 407 503 -2 1022 224 57 24 chr20 3938406 3938652 -68215230 + LTR16A1 LTR ERVL 204 457 0 388 265 146 40 chr20 3939244 3939395 -68214487 - MLT1H1 LTR MaLR 0 595 429 * 947 202 80 106 chr20 3939362 3939597 -68214285 - MLT1H1 LTR MaLR -251 304 77 243 0 0 0 chr20 3939597 3939624 -68214258 + (TGGGGG)n Simple_repeat Simple_repeat 3 29 0 947 202 80 106 chr20 3939624 3939700 -68214182 - MLT1H1 LTR MaLR -478 77 1 2005 148 3 13 chr20 3939767 3940078 -68213804 - AluJo SINE Alu -3 309 2 376 243 73 68 chr20 3940837 3941178 -68212704 - MLT1G1 LTR MaLR 0 595 248 2155 86 46 0 chr20 3941231 3941511 -68212371 - AluSg SINE Alu -17 293 1 184 234 0 21 chr20 3941891 3941938 -68211944 - L2 LINE L2 -1 3271 3226 1923 129 11 3 chr20 3941945 3942231 -68211651 - AluJb SINE Alu -24 288 1 186 143 0 0 chr20 3942587 3942622 -68211260 + (CACG)n Simple_repeat Simple_repeat 3 37 0 202 235 0 49 chr20 3942772 3942853 -68211029 + (CGG)n Simple_repeat Simple_repeat 2 78 0 318 132 0 0 chr20 3942949 3943002 -68210880 + (CTG)n Simple_repeat Simple_repeat 3 55 0 201 143 0 0 chr20 3943009 3943044 -68210838 + (CGG)n Simple_repeat Simple_repeat 2 36 0 469 256 119 74 chr20 3944107 3944419 -68209463 - L2 LINE L2 -62 3251 2926 277 280 196 40 chr20 3944758 3945207 -68208675 - L2 LINE L2 -13 3259 2755 2406 53 3 0 chr20 3946089 3946395 -68207487 + AluY SINE Alu 1 307 0 2294 92 3 3 chr20 3946414 3946717 -68207165 + AluSg SINE Alu 1 303 -7 203 197 158 26 chr20 3946976 3947052 -68206830 - MIR SINE MIR -15 247 162 1863 165 0 3 chr20 3947530 3947833 -68206049 + AluJb SINE Alu 5 306 -6 378 278 105 23 chr20 3947892 3948025 -68205857 - MIR SINE MIR -113 149 6 2370 94 0 3 chr20 3948242 3948541 -68205341 + AluSq SINE Alu 3 300 -13 206 233 0 0 chr20 3948658 3948701 -68205181 + L2 LINE L2 3180 3222 -91 206 233 0 0 chr20 3948735 3948778 -68205104 + L2 LINE L2 3180 3222 -91 204 219 0 0 chr20 3948812 3948853 -68205029 + L2 LINE L2 3180 3220 -93 222 209 0 0 chr20 3948889 3948932 -68204950 + L2 LINE L2 3180 3222 -91 222 209 0 0 chr20 3948966 3949009 -68204873 + L2 LINE L2 3180 3222 -91 206 233 0 0 chr20 3949043 3949086 -68204796 + L2 LINE L2 3180 3222 -91 222 209 0 0 chr20 3949120 3949163 -68204719 + L2 LINE L2 3180 3222 -91 206 233 0 0 chr20 3949197 3949240 -68204642 + L2 LINE L2 3180 3222 -91 219 166 49 190 chr20 3949317 3949480 -68204402 + L2 LINE L2 3174 3313 0 3239 72 54 41 chr20 3949924 3950408 -68203474 + L1PA7 LINE L1 5664 6153 -1 1480 175 130 0 chr20 3950633 3950902 -68202980 - AluJo SINE Alu -8 304 1 347 361 44 47 chr20 3950936 3951274 -68202608 - L2 LINE L2 -4 3268 2932 1794 212 67 25 chr20 3951300 3951748 -68202134 - MLT1C LTR MaLR 0 467 1 406 301 93 82 chr20 3951887 3952316 -68201566 + MLT1K LTR MaLR 155 588 0 244 128 0 0 chr20 3952347 3952386 -68201496 - MLT1A1 LTR MaLR -4 361 323 1569 181 14 31 chr20 3953067 3953355 -68200527 - AluJo SINE Alu -27 285 3 210 71 0 0 chr20 3953500 3953528 -68200354 + (T)n Simple_repeat Simple_repeat 1 28 0 25 112 0 0 chr20 3953773 3953889 -68199993 + AT_rich Low_complexity Low_complexity 1 116 0 314 232 53 70 chr20 3954923 3955069 -68198813 - L1ME3A LINE L1 -311 5842 5687 1724 187 3 3 chr20 3955069 3955363 -68198519 - AluJb SINE Alu -18 294 1 314 232 53 70 chr20 3955363 3955420 -68198462 - L1ME3A LINE L1 -466 5687 5631 267 239 65 84 chr20 3955420 3955683 -68198199 - Charlie2 DNA MER1_type -1 2861 2604 1856 182 3 3 chr20 3955683 3955990 -68197892 + AluJo SINE Alu 1 307 -5 436 343 15 27 chr20 3956013 3956279 -68197603 - L1ME3A LINE L1 -1008 5121 4859 351 0 0 0 chr20 3956626 3956665 -68197217 + (TTA)n Simple_repeat Simple_repeat 2 40 0 229 253 122 61 chr20 3956871 3957116 -68196766 - L1ME3A LINE L1 -1820 4309 4050 386 260 26 52 chr20 3957161 3957327 -68196555 - L1ME3A LINE L1 -2248 3881 3719 2428 97 0 0 chr20 3957327 3957636 -68196246 - AluSg SINE Alu -1 309 1 386 260 26 52 chr20 3957636 3957661 -68196221 - L1ME3A LINE L1 -2410 3719 3695 333 291 66 18 chr20 3957678 3957895 -68195987 - L1ME3A LINE L1 -875 1615 1412 385 171 53 135 chr20 3957895 3958065 -68195817 - L1MC5 LINE L1 -48 7913 7758 1565 164 92 0 chr20 3958112 3958393 -68195489 - AluSx SINE Alu 0 312 6 1345 281 106 59 chr20 3958492 3958965 -68194917 - L1MEd LINE L1 -4840 1289 840 1903 101 8 0 chr20 3958965 3959213 -68194669 - AluSg1 SINE Alu -24 285 36 1345 281 106 59 chr20 3959213 3959900 -68193982 - L1MEd LINE L1 -5289 840 82 1464 261 62 62 chr20 3959915 3960665 -68193217 - L1M4 LINE L1 -984 5162 4409 2214 91 0 0 chr20 3960665 3960968 -68192914 - AluSx SINE Alu 0 314 12 1464 261 62 62 chr20 3960968 3961021 -68192861 - L1M4 LINE L1 -1736 4410 4358 524 274 161 46 chr20 3962877 3963336 -68190546 + L2 LINE L2 1702 2213 -1101 192 305 189 12 chr20 3963339 3963503 -68190379 + L2 LINE L2 2349 2541 -773 360 0 0 0 chr20 3963888 3963928 -68189954 + (TG)n Simple_repeat Simple_repeat 2 41 0 282 95 0 0 chr20 3964536 3964578 -68189304 + (GA)n Simple_repeat Simple_repeat 2 43 0 213 39 0 0 chr20 3964595 3964621 -68189261 + (CA)n Simple_repeat Simple_repeat 1 26 0 286 125 57 40 chr20 3964627 3964803 -68189079 + (TA)n Simple_repeat Simple_repeat 1 179 0 23 0 0 0 chr20 3964803 3964826 -68189056 + AT_rich Low_complexity Low_complexity 1 23 0 210 37 0 0 chr20 3964842 3964869 -68189013 + (TG)n Simple_repeat Simple_repeat 2 28 0 1592 182 3 27 chr20 3964883 3965180 -68188702 - AluJo SINE Alu -22 290 1 885 116 8 0 chr20 3965181 3965302 -68188580 - AluJo SINE Alu -178 134 13 272 322 148 75 chr20 3965646 3966031 -68187851 - L2 LINE L2 -12 3260 2848 191 322 58 58 chr20 3966068 3966242 -68187640 - L2 LINE L2 -570 2744 2571 262 321 28 9 chr20 3966450 3966556 -68187326 - L2 LINE L2 -1026 2288 2181 23 0 0 0 chr20 3966805 3966828 -68187054 + AT_rich Low_complexity Low_complexity 1 23 0 318 272 150 41 chr20 3967049 3967196 -68186686 - MER5B DNA MER1_type -15 163 1 567 250 131 48 chr20 3967395 3967807 -68186075 + L1MC4a LINE L1 5749 6194 -1614 14474 24 0 5 chr20 3967830 3969659 -68184223 - L1PA3 LINE L1 -2928 3218 1399 18137 27 1 2 chr20 3969659 3972591 -68181291 + L1PA3 LINE L1 3217 6151 -4 35 0 0 0 chr20 3972591 3972626 -68181256 + AT_rich Low_complexity Low_complexity 1 35 0 630 310 35 22 chr20 3972936 3973252 -68180630 + L1MC4a LINE L1 6495 6814 -994 394 291 40 84 chr20 3973266 3973517 -68180365 + L1MEd LINE L1 348 587 -5829 3363 211 73 70 chr20 3974005 3976140 -68177742 + L1MDb LINE L1 7 2009 -4397 1988 124 3 24 chr20 3976140 3976477 -68177405 + AluSq SINE Alu 1 331 0 3363 211 73 70 chr20 3976477 3976751 -68177131 + L1MDb LINE L1 2009 2281 -4125 2746 193 32 2 chr20 3976751 3977280 -68176602 + MLT2B3 LTR ERVL 2 546 -8 851 207 132 3 chr20 3977281 3977633 -68176249 + L1MDb LINE L1 2273 2672 -3734 1320 189 21 89 chr20 3977646 3978040 -68175842 + L1MD2 LINE L1 5971 6358 -1 359 140 0 110 chr20 3978039 3978082 -68175800 + L1MD3 LINE L1 7698 7725 -270 * 2186 124 0 3 chr20 3978082 3978388 -68175494 + AluSx SINE Alu 1 305 -7 359 140 0 110 chr20 3978388 3978444 -68175438 + L1MD3 LINE L1 7725 7786 -209 186 43 0 0 chr20 3978444 3978467 -68175415 + (CA)n Simple_repeat Simple_repeat 2 24 0 327 289 75 64 chr20 3978469 3978749 -68175133 + L1MEd LINE L1 1084 1366 -5050 336 123 49 74 chr20 3978750 3978831 -68175051 + MADE1 DNA Mariner 2 80 0 2288 77 7 17 chr20 3978852 3979150 -68174732 + AluSg1 SINE Alu 1 295 -14 236 35 0 0 chr20 3979162 3979191 -68174691 + MADE1 DNA Mariner 44 72 -8 263 292 44 15 chr20 3979227 3979364 -68174518 + L1MEd LINE L1 1252 1392 -5034 2127 62 52 72 chr20 3979422 3979727 -68174155 - AluSc SINE Alu -8 301 3 766 129 9 9 chr20 3979793 3979909 -68173973 + FLAM_C SINE Alu 1 116 -27 22 35 0 0 chr20 3979911 3979940 -68173942 + AT_rich Low_complexity Low_complexity 1 29 0 732 258 118 65 chr20 3979940 3980059 -68173823 + L1MEd LINE L1 1511 1622 -4804 938 194 92 10 chr20 3980059 3980265 -68173617 - MER58A DNA MER1_type 0 224 2 732 258 118 65 chr20 3980265 3981211 -68172671 + L1MEd LINE L1 1622 2781 -3645 2118 117 0 23 chr20 3981226 3981533 -68172349 - AluSx SINE Alu -12 300 1 1303 245 62 90 chr20 3981539 3981992 -68171890 - L1MC4 LINE L1 0 8042 7623 974 228 9 9 chr20 3981992 3982216 -68171666 - MER58A DNA MER1_type 0 224 1 1303 245 62 90 chr20 3982216 3982619 -68171263 - L1MC4 LINE L1 -419 7623 7210 684 227 122 25 chr20 3982723 3983084 -68170798 + L1MEd LINE L1 3151 3546 -2880 189 0 0 0 chr20 3983816 3983837 -68170045 + (TA)n Simple_repeat Simple_repeat 1 21 0 9459 34 14 0 chr20 3983838 3985767 -68168115 - L1PA4 LINE L1 0 6155 4211 915 74 0 0 chr20 3985772 3985893 -68167989 - L1P LINE L1 -6025 121 1 1038 260 91 37 chr20 3985948 3986409 -68167473 + L1MEd LINE L1 3764 4277 -2149 1859 164 10 0 chr20 3986409 3986708 -68167174 + AluJb SINE Alu 1 302 -10 1038 260 91 37 chr20 3986708 3986949 -68166933 + L1MEd LINE L1 4277 4504 -1922 757 298 121 86 chr20 3986970 3988106 -68165776 - L2 LINE L2 -1039 2275 1101 505 245 66 0 chr20 3988121 3988272 -68165610 - MER104 DNA Tc2 -16 164 4 240 185 15 31 chr20 3988275 3988340 -68165542 - MLT1L LTR MaLR -6 609 546 3297 58 9 0 chr20 3988456 3988888 -68164994 - L1PA7 LINE L1 -236 5918 5483 335 277 130 12 chr20 3988934 3989187 -68164695 + L1ME4a LINE L1 5813 6095 -26 1913 122 0 0 chr20 3989258 3989520 -68164362 + AluSx SINE Alu 38 299 -13 705 137 144 7 chr20 3990107 3990246 -68163636 + L1MB7 LINE L1 5864 6021 -163 525 158 50 8 chr20 3990250 3990370 -68163512 + L1MB7 LINE L1 6060 6184 0 398 222 202 30 chr20 3990401 3990604 -68163278 - L1MC5 LINE L1 -118 7843 7606 333 284 37 8 chr20 3990608 3990742 -68163140 - L1ME LINE L1 -302 5819 5682 258 32 0 0 chr20 3990742 3990773 -68163109 + (A)n Simple_repeat Simple_repeat 1 31 0 385 319 78 20 chr20 3991147 3991347 -68162535 + HAL1 LINE L1 1055 1267 -1237 719 153 7 44 chr20 3991347 3991508 -68162374 + L1PB2 LINE L1 6013 6151 0 250 275 50 17 chr20 3991567 3991687 -68162195 + HAL1 LINE L1 1516 1639 -868 2005 148 0 7 chr20 3992236 3992540 -68161342 - AluSx SINE Alu -10 302 1 229 114 91 0 chr20 3992683 3992727 -68161155 + L1MEc LINE L1 2424 2471 -3925 924 142 24 0 chr20 3992728 3992897 -68160985 + L1PA16 LINE L1 5876 6048 -118 225 121 52 52 chr20 3992899 3992957 -68160925 + L1MEc LINE L1 2954 3011 -3204 506 189 90 0 chr20 3992971 3993093 -68160789 + L1PA16 LINE L1 6034 6166 0 2077 250 34 13 chr20 3993100 3993540 -68160342 + L1M4 LINE L1 2346 2808 -3338 1539 160 21 50 chr20 3993540 3993822 -68160060 - AluJo SINE Alu -26 286 13 2077 250 34 13 chr20 3993822 3994089 -68159793 + L1M4 LINE L1 2808 3068 -3078 29630 89 13 16 chr20 3994089 3999826 -68154056 + L1PA7 LINE L1 736 6469 0 1768 243 115 38 chr20 3999793 3999833 -68154049 + L1ME2 LINE L1 5595 5631 -1018 * 2265 93 3 0 chr20 3999833 4000124 -68153758 + AluSg1 SINE Alu 1 292 -17 2002 134 100 3 chr20 4000124 4000474 -68153408 + L1PA15 LINE L1 5777 6160 -5 1768 243 115 38 chr20 4000474 4000552 -68153330 + L1ME2 LINE L1 5631 5702 -947 1861 176 3 7 chr20 4000552 4000854 -68153028 - AluJb SINE Alu -11 301 1 1768 243 115 38 chr20 4000854 4001559 -68152323 + L1ME2 LINE L1 5702 6645 -4 475 301 121 27 chr20 4001586 4001918 -68151964 + L1M4 LINE L1 2131 2493 -3653 198 80 60 0 chr20 4001958 4002008 -68151874 + (TA)n Simple_repeat Simple_repeat 2 54 0 1963 119 0 58 chr20 4002009 4002320 -68151562 - AluSg SINE Alu -17 293 1 588 288 49 18 chr20 4002967 4003388 -68150494 + L1MC4a LINE L1 5472 5904 -1904 234 0 0 0 chr20 4003538 4003564 -68150318 + (CAA)n Simple_repeat Simple_repeat 2 27 0 1188 164 4 44 chr20 4003664 4003890 -68149992 + AluJo SINE Alu 85 301 -11 508 250 190 33 chr20 4004378 4004510 -68149372 - LTR16A LTR ERVL -103 347 237 2532 52 0 0 chr20 4004510 4004801 -68149081 - AluY SINE Alu -20 291 1 508 250 190 33 chr20 4004801 4004968 -68148914 - LTR16A LTR ERVL -213 237 1 1244 283 50 6 chr20 4005084 4005445 -68148437 + MLT1J LTR MaLR 43 419 -92 224 163 0 20 chr20 4005515 4005564 -68148318 + (TA)n Simple_repeat Simple_repeat 1 48 0 582 185 8 39 chr20 4005564 4005694 -68148188 - FLAM_C SINE Alu -15 128 3 245 164 36 0 chr20 4005720 4005775 -68148107 - MLT1L LTR MaLR -414 201 145 795 301 158 12 chr20 4005821 4006383 -68147499 - L2 LINE L2 -2203 1111 468 926 203 143 45 chr20 4006428 4006694 -68147188 + AluJo SINE Alu 2 293 -19 48 60 0 0 chr20 4006873 4006956 -68146926 + AT_rich Low_complexity Low_complexity 1 83 0 405 0 0 0 chr20 4007328 4007373 -68146509 + (CA)n Simple_repeat Simple_repeat 2 46 0 2246 95 7 0 chr20 4007379 4007675 -68146207 - AluSq SINE Alu -15 298 1 4526 169 54 88 chr20 4007872 4007941 -68145941 - Charlie1 DNA MER1_type 0 2761 2691 2137 98 0 7 chr20 4007941 4008256 -68145626 - AluSx SINE Alu 0 313 1 4526 169 54 88 chr20 4008256 4009257 -68144625 - Charlie1 DNA MER1_type -70 2691 1658 3171 44 0 0 chr20 4009257 4009642 -68144240 - L1PA5 LINE L1 0 6154 5770 4526 169 54 88 chr20 4009642 4009700 -68144182 - Charlie1 DNA MER1_type -1103 1658 1600 1373 12 0 12 chr20 4009700 4009863 -68144019 - L1PA2 LINE L1 0 6155 5995 4526 169 54 88 chr20 4009863 4010236 -68143646 - Charlie1 DNA MER1_type -1161 1600 1 411 288 61 58 chr20 4010272 4010567 -68143315 + L2 LINE L2 2369 2664 -650 341 308 221 13 chr20 4010543 4010851 -68143031 + L2 LINE L2 2809 3180 -133 * 261 289 81 62 chr20 4010912 4011234 -68142648 - L2 LINE L2 -1389 1925 1598 198 330 22 60 chr20 4011556 4011738 -68142144 - L2 LINE L2 -2202 1112 938 * 258 333 108 9 chr20 4011721 4011832 -68142050 + L2 LINE L2 3151 3272 0 207 257 36 67 chr20 4012213 4012359 -68141523 + MIR SINE MIR 47 186 -66 192 77 0 0 chr20 4012502 4012528 -68141354 + (TG)n Simple_repeat Simple_repeat 1 26 0 2773 10 0 0 chr20 4012810 4013111 -68140771 - AluY SINE Alu -10 301 1 2018 171 12 0 chr20 4013128 4013472 -68140410 - MER7A DNA MER2_type 0 346 1 180 275 0 0 chr20 4014008 4014048 -68139834 - MIR SINE MIR -5 257 218 369 176 0 39 chr20 4014274 4014376 -68139506 + C-rich Low_complexity Low_complexity 4 101 0 1707 144 0 36 chr20 4014386 4014664 -68139218 - AluJo SINE Alu -44 268 1 861 250 98 47 chr20 4014782 4015078 -68138804 + L2 LINE L2 3003 3313 0 2222 109 0 10 chr20 4015165 4015467 -68138415 + AluSx SINE Alu 1 299 -13 1752 159 0 66 chr20 4015476 4015809 -68138073 + AluJb SINE Alu 1 311 -1 275 300 79 14 chr20 4016022 4016162 -68137720 - L1ME LINE L1 -418 5752 5604 243 0 0 0 chr20 4016222 4016249 -68137633 + (TGG)n Simple_repeat Simple_repeat 3 29 0 404 336 59 42 chr20 4016264 4016550 -68137332 + L1ME LINE L1 5339 5629 -492 26 0 0 0 chr20 4016786 4016812 -68137070 + AT_rich Low_complexity Low_complexity 1 26 0 2171 109 17 7 chr20 4016815 4017117 -68136765 + AluSq SINE Alu 5 309 -4 406 286 146 21 chr20 4017681 4017873 -68136009 - MIR SINE MIR 0 262 47 2201 100 0 3 chr20 4018116 4018417 -68135465 - AluSg SINE Alu -10 300 1 1256 199 101 38 chr20 4019957 4020045 -68133837 - MER2 DNA MER2_type -8 337 256 2134 101 3 3 chr20 4020045 4020343 -68133539 + AluSx SINE Alu 1 298 -14 1256 199 101 38 chr20 4020343 4020571 -68133311 - MER2 DNA MER2_type -89 256 1 274 231 56 28 chr20 4021102 4021210 -68132672 - L1ME4a LINE L1 -43 6078 5968 21 36 0 0 chr20 4021340 4021368 -68132514 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr20 4021531 4021554 -68132328 + AT_rich Low_complexity Low_complexity 1 23 0 1515 147 0 0 chr20 4021768 4021993 -68131889 + AluSq SINE Alu 1 225 -88 898 178 0 32 chr20 4021993 4022178 -68131704 - L1P LINE L1 -1290 4856 4678 475 230 35 18 chr20 4022597 4022710 -68131172 + L2 LINE L2 754 868 -2446 1386 218 62 87 chr20 4022724 4022931 -68130951 + LTR16A1 LTR ERVL 1 212 -245 457 206 124 0 chr20 4022931 4023028 -68130854 - MER81 DNA DNA -4 110 2 1386 218 62 87 chr20 4023028 4023289 -68130593 + LTR16A1 LTR ERVL 212 457 0 204 286 91 13 chr20 4023292 4023369 -68130513 + L2 LINE L2 880 962 -2352 555 306 43 14 chr20 4023376 4023585 -68130297 + L2 LINE L2 1290 1504 -1810 563 220 61 0 chr20 4023589 4023721 -68130161 + MER3 DNA MER1_type 1 140 -69 1870 238 88 13 chr20 4023723 4024248 -68129634 + L2 LINE L2 1931 2494 -820 1948 222 126 69 chr20 4024261 4024815 -68129067 - MLT1E LTR MaLR -6 587 2 251 235 0 0 chr20 4024822 4024873 -68129009 + L2 LINE L2 2507 2557 -757 507 345 132 20 chr20 4025126 4025765 -68128117 + L2 LINE L2 2583 3310 -3 2192 75 4 0 chr20 4026030 4026358 -68127524 - AluY SINE Alu 0 329 1 2550 19 7 10 chr20 4026715 4027024 -68126858 - AluY SINE Alu -3 308 1 1830 213 89 39 chr20 4029001 4029588 -68124294 + HAL1b LINE L1 351 966 -382 427 256 81 121 chr20 4029791 4030237 -68123645 - L1ME4a LINE L1 -96 6025 5598 318 259 173 7 chr20 4030163 4030302 -68123580 + HAL1b LINE L1 947 1108 -240 * 461 193 67 47 chr20 4030317 4030467 -68123415 + HAL1b LINE L1 1196 1348 0 373 172 32 11 chr20 4031757 4031850 -68122032 - L1MB3 LINE L1 -2 6181 6087 2693 108 31 7 chr20 4031858 4032283 -68121599 - L1MA4 LINE L1 -282 6018 5584 2138 78 0 7 chr20 4032760 4033070 -68120812 + AluSx SINE Alu 3 310 0 24 0 0 0 chr20 4033190 4033214 -68120668 + AT_rich Low_complexity Low_complexity 1 24 0 1621 158 14 7 chr20 4033454 4033745 -68120137 - AluJo SINE Alu -19 293 1 1227 198 20 4 chr20 4035576 4035824 -68118058 - L1MB3 LINE L1 0 6183 5932 362 302 47 13 chr20 4036036 4036185 -68117697 - L2 LINE L2 -220 3052 2899 2162 92 0 0 chr20 4036503 4036786 -68117096 + AluY SINE Alu 1 283 -28 1809 104 9 95 chr20 4037205 4037542 -68116340 + AluSx SINE Alu 1 308 -4 2075 109 6 10 chr20 4038336 4038647 -68115235 + AluSx SINE Alu 1 310 -2 239 239 90 45 chr20 4038981 4039048 -68114834 + L2 LINE L2 3185 3254 -18 2262 75 7 7 chr20 4039725 4040030 -68113852 + AluY SINE Alu 1 305 -6 1024 133 0 6 chr20 4040078 4040236 -68113646 + FRAM SINE Alu 1 153 -23 3249 204 19 13 chr20 4040252 4040879 -68113003 + MER82 DNA MER2_type 1 631 -22 2710 125 101 9 chr20 4040896 4041351 -68112531 - Tigger3(Golem) DNA MER2_type -2 3027 2531 253 260 0 0 chr20 4041355 4041405 -68112477 - Tigger3(Golem) DNA MER2_type -2969 60 11 1935 154 0 0 chr20 4041506 4041804 -68112078 + AluJo SINE Alu 1 298 -14 956 229 122 17 chr20 4041808 4042162 -68111720 - L1MC5 LINE L1 -311 7650 7260 * 1028 196 27 162 chr20 4042130 4042649 -68111233 - L1MC5 LINE L1 -902 7059 6611 1992 212 41 37 chr20 4042732 4042924 -68110958 - L1MC5 LINE L1 -1907 5901 5711 881 48 112 0 chr20 4042924 4043049 -68110833 - MER85 DNA T2_type 0 139 1 1992 212 41 37 chr20 4043049 4043417 -68110465 - L1MC5 LINE L1 -2097 5711 5339 512 358 87 22 chr20 4043428 4043844 -68110038 - L1MC5 LINE L1 -878 5268 4826 26 0 0 0 chr20 4043926 4043952 -68109930 + AT_rich Low_complexity Low_complexity 1 26 0 790 189 0 8 chr20 4044251 4044383 -68109499 + FLAM_A SINE Alu 1 131 -2 733 173 8 23 chr20 4044957 4045090 -68108792 + MER3 DNA MER1_type 1 131 -78 185 0 0 39 chr20 4045090 4045116 -68108766 + (TTTAA)n Simple_repeat Simple_repeat 1 25 0 21 0 0 0 chr20 4045474 4045495 -68108387 + AT_rich Low_complexity Low_complexity 1 21 0 44 20 0 0 chr20 4046015 4046066 -68107816 + GC_rich Low_complexity Low_complexity 1 51 0 232 215 39 39 chr20 4046162 4046292 -68107590 + (CGGG)n Simple_repeat Simple_repeat 3 132 0 591 278 97 38 chr20 4046526 4046896 -68106986 - L1ME4a LINE L1 0 6121 5730 326 254 74 8 chr20 4046955 4047077 -68106805 - L1ME4a LINE L1 -93 6028 5899 572 234 90 27 chr20 4047248 4047344 -68106538 - L2 LINE L2 -1114 2200 2112 2013 115 0 7 chr20 4047344 4047656 -68106226 + AluSx SINE Alu 1 310 0 572 234 90 27 chr20 4047656 4047746 -68106136 - L2 LINE L2 -1202 2112 2001 542 257 137 7 chr20 4047776 4048076 -68105806 - L1ME4a LINE L1 -757 5389 5051 683 183 0 23 chr20 4048202 4048377 -68105505 + CT-rich Low_complexity Low_complexity 2 172 0 180 0 0 0 chr20 4048381 4048401 -68105481 + (TTTCC)n Simple_repeat Simple_repeat 5 24 0 537 183 0 0 chr20 4048726 4048819 -68105063 - AluJo/FRAM SINE Alu -12 300 208 274 146 0 0 chr20 4048820 4048861 -68105021 - AluSp SINE Alu -129 174 134 2047 123 0 3 chr20 4048861 4049162 -68104720 - AluSx SINE Alu -12 300 1 29 0 0 0 chr20 4049162 4049191 -68104691 + AT_rich Low_complexity Low_complexity 1 29 0 2411 52 0 0 chr20 4049203 4049494 -68104388 + AluY SINE Alu 5 295 -16 803 232 34 23 chr20 4049494 4049671 -68104211 + AluJo/FRAM SINE Alu 134 312 0 607 131 0 0 chr20 4049687 4049771 -68104111 + AluSg/x SINE Alu 209 292 -18 395 125 219 31 chr20 4049772 4049868 -68104014 - L1MB8 LINE L1 -10 6168 6055 784 81 16 49 chr20 4049868 4049991 -68103891 - AluSg/x SINE Alu -10 299 181 531 61 0 0 chr20 4050032 4050098 -68103784 + Alu SINE Alu 2 67 -243 1813 129 4 0 chr20 4050098 4050361 -68103521 - AluSq SINE Alu -49 264 1 970 102 0 0 chr20 4050361 4050489 -68103393 - AluJb SINE Alu -176 136 9 1563 188 10 0 chr20 4050894 4051192 -68102690 + AluJb SINE Alu 3 303 -9 2171 121 0 0 chr20 4051394 4051700 -68102182 - AluSx SINE Alu -1 311 6 1286 198 0 54 chr20 4051814 4051952 -68101930 - AluJo SINE Alu -11 301 157 2092 109 0 3 chr20 4051952 4052256 -68101626 - AluSg SINE Alu -6 304 2 1286 198 0 54 chr20 4052256 4052430 -68101452 - AluJo SINE Alu -155 157 6 1004 146 99 4 chr20 4052434 4052667 -68101215 + MER33 DNA MER1_type 39 293 -31 2210 93 3 0 chr20 4052667 4052967 -68100915 + AluSx SINE Alu 1 301 -11 292 40 40 20 chr20 4053064 4053114 -68100768 + (TTTTA)n Simple_repeat Simple_repeat 1 51 0 6821 17 1 0 chr20 4053114 4053876 -68100006 - L1PA3 LINE L1 -24 6131 5369 2102 98 7 3 chr20 4054571 4054878 -68099004 + AluSg SINE Alu 1 308 -2 300 261 45 11 chr20 4055298 4055386 -68098496 + MIR SINE MIR 55 145 -117 338 207 0 45 chr20 4055834 4055945 -68097937 + CT-rich Low_complexity Low_complexity 3 108 0 198 0 0 0 chr20 4057807 4057829 -68096053 + (T)n Simple_repeat Simple_repeat 1 22 0 358 266 117 33 chr20 4058210 4058424 -68095458 - Charlie8 DNA MER1_type -2185 232 1 378 0 0 0 chr20 4058976 4059018 -68094864 + (TG)n Simple_repeat Simple_repeat 1 42 0 204 293 84 89 chr20 4063585 4063978 -68089904 + L2 LINE L2 2379 2769 -545 219 88 0 0 chr20 4065282 4065316 -68088566 + (TGGA)n Simple_repeat Simple_repeat 2 35 0 2160 115 0 0 chr20 4065926 4066222 -68087660 + AluSg SINE Alu 1 296 -14 189 190 0 103 chr20 4066502 4066560 -68087322 - MIR SINE MIR -94 168 117 190 264 23 46 chr20 4066986 4067073 -68086809 - MIR SINE MIR -59 149 65 205 250 21 0 chr20 4067219 4067267 -68086615 - L2 LINE L2 -15 3257 3209 1348 224 103 3 chr20 4067948 4068296 -68085586 - L1ME3 LINE L1 0 6162 5780 1329 114 0 0 chr20 4068305 4068481 -68085401 - AluSq SINE Alu -4 309 134 2271 107 0 3 chr20 4068481 4068772 -68085110 - AluSg SINE Alu -14 296 7 21 0 0 0 chr20 4068790 4068811 -68085071 + AT_rich Low_complexity Low_complexity 1 21 0 1615 118 78 0 chr20 4068811 4069081 -68084801 + AluSp SINE Alu 1 291 -22 216 0 0 0 chr20 4069081 4069105 -68084777 + (TA)n Simple_repeat Simple_repeat 2 25 0 1229 171 18 40 chr20 4069107 4069335 -68084547 - AluJb SINE Alu -4 308 86 1952 161 0 37 chr20 4069342 4069666 -68084216 - AluJo SINE Alu 0 312 1 476 206 10 0 chr20 4069749 4069846 -68084036 - L1ME1 LINE L1 -31 6135 6038 481 262 60 0 chr20 4069884 4070033 -68083849 - L1ME3 LINE L1 -512 5652 5495 2334 108 0 0 chr20 4070043 4070350 -68083532 + AluSx SINE Alu 2 308 -4 2397 76 0 13 chr20 4070350 4070653 -68083229 + AluY SINE Alu 1 299 -12 606 259 7 0 chr20 4071816 4071959 -68081923 + MIR SINE MIR 82 225 -37 654 227 0 0 chr20 4071961 4072089 -68081793 + FLAM_C SINE Alu 1 128 -5 2579 59 0 3 chr20 4072093 4072400 -68081482 + AluY SINE Alu 1 306 -5 1415 162 55 28 chr20 4072601 4072891 -68080991 + AluJo SINE Alu 1 298 -14 2011 148 3 16 chr20 4073247 4073557 -68080325 + AluJb SINE Alu 1 306 -6 805 207 0 55 chr20 4073668 4073832 -68080050 + FAM SINE Alu 1 155 -30 432 0 0 0 chr20 4073836 4073884 -68079998 + (TAAA)n Simple_repeat Simple_repeat 2 49 0 1815 166 7 17 chr20 4073937 4074057 -68079825 + AluJb SINE Alu 1 121 -191 2391 46 43 0 chr20 4074057 4074338 -68079544 - AluY SINE Alu -17 294 2 1815 166 7 17 chr20 4074338 4074518 -68079364 + AluJb SINE Alu 121 298 -14 219 36 0 0 chr20 4074816 4074844 -68079038 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 2198 122 7 0 chr20 4074972 4075268 -68078614 + AluSx SINE Alu 1 298 -14 208 213 27 107 chr20 4075464 4075539 -68078343 - MIR SINE MIR -9 253 185 203 310 55 41 chr20 4075880 4076025 -68077857 + L2 LINE L2 2913 3059 -213 2435 31 45 3 chr20 4076478 4076766 -68077116 - AluY SINE Alu -11 300 1 1884 246 53 28 chr20 4076846 4077283 -68076599 - L1ME3A LINE L1 -8 6162 5706 2398 94 0 3 chr20 4077283 4077592 -68076290 + AluSq SINE Alu 1 308 -5 1884 246 53 28 chr20 4077592 4077720 -68076162 - L1ME3A LINE L1 -464 5706 5583 1084 186 27 9 chr20 4078660 4078880 -68075002 + AluJb SINE Alu 1 224 -88 216 0 0 0 chr20 4078880 4078904 -68074978 + (A)n Simple_repeat Simple_repeat 1 24 0 189 121 0 0 chr20 4079020 4079053 -68074829 + (TGG)n Simple_repeat Simple_repeat 1 33 0 235 329 13 0 chr20 4079499 4079578 -68074304 + MER5A DNA MER1_type 92 171 -18 22 35 0 0 chr20 4079731 4079760 -68074122 + GC_rich Low_complexity Low_complexity 1 29 0 1021 238 75 79 chr20 4080541 4080848 -68073034 - L1MC4 LINE L1 -55 7987 7681 2170 110 20 3 chr20 4080848 4081149 -68072733 - AluSx SINE Alu -6 306 1 1021 238 75 79 chr20 4081149 4081333 -68072549 - L1MC4 LINE L1 -361 7681 7498 219 125 0 0 chr20 4081336 4081376 -68072506 + (T)n Simple_repeat Simple_repeat 1 40 0 891 242 12 48 chr20 4081984 4082232 -68071650 - MIR SINE MIR -4 258 20 2529 51 0 10 chr20 4082737 4083033 -68070849 - AluY SINE Alu -18 293 1 446 290 15 8 chr20 4083189 4083320 -68070562 + MIR SINE MIR 71 202 -60 2215 118 3 0 chr20 4084133 4084430 -68069452 + AluSx SINE Alu 1 298 -14 348 290 108 6 chr20 4085125 4085301 -68068581 - LTR16C LTR ERVL -144 347 154 183 234 39 65 chr20 4086257 4086334 -68067548 - L2 LINE L2 -4 3309 3235 2078 112 11 0 chr20 4086746 4087043 -68066839 - AluY SINE Alu 0 300 1 2425 115 0 0 chr20 4087232 4087544 -68066338 - AluSx SINE Alu 0 312 1 4845 133 17 35 chr20 4087681 4088570 -68065312 - L1MC1 LINE L1 0 6333 5461 1173 127 6 0 chr20 4088570 4088735 -68065147 - AluSg/x SINE Alu -11 301 136 2257 123 0 0 chr20 4088737 4089038 -68064844 - AluSx SINE Alu -11 301 1 2490 155 26 90 chr20 4089038 4089392 -68064490 - L1MC1 LINE L1 -743 5403 5028 2050 130 17 13 chr20 4089392 4089692 -68064190 + AluJo SINE Alu 1 301 -11 2490 155 26 90 chr20 4089692 4089709 -68064173 - L1MC1 LINE L1 -1118 5028 5011 2475 73 7 0 chr20 4089709 4090010 -68063872 - AluSp SINE Alu -10 303 1 2490 155 26 90 chr20 4090010 4090386 -68063496 - L1MC1 LINE L1 -1135 5011 4612 2087 149 7 0 chr20 4090386 4090687 -68063195 - AluSx SINE Alu -9 303 1 2490 155 26 90 chr20 4090687 4090709 -68063173 - L1MC1 LINE L1 -1534 4612 4772 2575 67 0 13 chr20 4090709 4091022 -68062860 - AluY SINE Alu -2 309 1 2490 155 26 90 chr20 4091022 4091094 -68062788 - L1MC1 LINE L1 -1373 4773 4698 261 54 0 0 chr20 4091094 4091117 -68062765 + (TA)n Simple_repeat Simple_repeat 2 27 -11 248 0 31 0 chr20 4091117 4091149 -68062733 + (TG)n Simple_repeat Simple_repeat 2 34 0 261 54 0 0 chr20 4091149 4091162 -68062720 + (TA)n Simple_repeat Simple_repeat 26 38 0 1388 171 102 4 chr20 4091162 4091408 -68062474 - AluJo SINE Alu -8 304 35 2239 117 10 3 chr20 4091439 4091739 -68062143 + AluSx SINE Alu 1 302 -10 2542 80 0 3 chr20 4091739 4092050 -68061832 + AluY SINE Alu 1 311 0 2122 145 0 3 chr20 4092097 4092393 -68061489 - AluSx SINE Alu -15 297 3 2367 91 0 3 chr20 4092399 4092696 -68061186 - AluSc SINE Alu -13 296 1 640 203 0 43 chr20 4092699 4092837 -68061045 - AluJo/FLAM SINE Alu -169 133 2 1768 224 41 24 chr20 4092840 4093375 -68060507 - L1 LINE L1 -1818 4328 3695 762 81 0 0 chr20 4093375 4093486 -68060396 + (TTCC)n Simple_repeat Simple_repeat 2 112 0 654 123 0 9 chr20 4093487 4093593 -68060289 + AluSg/x SINE Alu 70 174 -138 1963 90 0 8 chr20 4093595 4093839 -68060043 - AluSx SINE Alu -70 242 1 257 301 65 8 chr20 4093843 4093966 -68059916 - L1MC/D LINE L1 -1921 5887 5758 2435 94 7 0 chr20 4094068 4094377 -68059505 + AluSp SINE Alu 1 311 -2 463 335 93 40 chr20 4094385 4094686 -68059196 - L1 LINE L1 -2987 3159 2843 2327 108 0 3 chr20 4094692 4094988 -68058894 + AluSq SINE Alu 1 295 -18 450 297 103 65 chr20 4095006 4095096 -68058786 - HAL1b LINE L1 -964 384 299 2494 65 10 7 chr20 4095096 4095404 -68058478 - AluSp SINE Alu -4 309 1 450 297 103 65 chr20 4095404 4095473 -68058409 - HAL1b LINE L1 -1049 299 234 2051 103 0 0 chr20 4095473 4095735 -68058147 - AluSc SINE Alu -12 297 36 450 297 103 65 chr20 4095735 4095864 -68058018 - HAL1b LINE L1 -1114 234 84 739 163 8 0 chr20 4096544 4096667 -68057215 + FLAM_C SINE Alu 1 124 -9 1786 147 0 99 chr20 4096683 4096870 -68057012 - AluSx SINE Alu -11 301 160 2400 79 33 0 chr20 4096870 4097173 -68056709 - AluSp SINE Alu 0 313 1 1786 147 0 99 chr20 4097173 4097319 -68056563 - AluSx SINE Alu -152 160 1 563 165 43 0 chr20 4097328 4097443 -68056439 - FLAM_A SINE Alu 0 142 23 21 0 0 0 chr20 4097452 4097473 -68056409 + AT_rich Low_complexity Low_complexity 1 21 0 2372 91 0 3 chr20 4097487 4097784 -68056098 + AluSx SINE Alu 1 296 -16 637 223 41 30 chr20 4097793 4097896 -68055986 - L1MB4 LINE L1 0 6180 6080 2421 107 0 0 chr20 4097896 4098205 -68055677 - AluSq SINE Alu -4 309 1 637 223 41 30 chr20 4098205 4098330 -68055552 - L1MB4 LINE L1 -100 6080 5957 226 299 83 42 chr20 4098690 4098834 -68055048 + L2 LINE L2 3163 3312 -1 2077 127 27 7 chr20 4099089 4099434 -68054448 + AluJb SINE Alu 1 351 0 1922 122 4 0 chr20 4099521 4099776 -68054106 + AluSx SINE Alu 1 256 -56 1881 112 37 44 chr20 4099876 4100172 -68053710 + AluSx SINE Alu 1 294 -18 960 194 10 41 chr20 4100209 4100335 -68053547 + AluJo SINE Alu 23 142 -170 2535 57 3 0 chr20 4100335 4100632 -68053250 + AluY SINE Alu 1 298 -13 960 194 10 41 chr20 4100632 4100701 -68053181 + AluJo SINE Alu 142 212 -100 1511 169 4 28 chr20 4100740 4100994 -68052888 - AluJb SINE Alu -64 248 1 337 256 6 106 chr20 4100996 4101084 -68052798 + L1ME3 LINE L1 6019 6114 -48 2223 75 7 55 chr20 4101084 4101391 -68052491 + AluSx SINE Alu 16 307 -5 2499 80 0 0 chr20 4101396 4101695 -68052187 + AluSc SINE Alu 1 299 -10 337 256 6 106 chr20 4101695 4101760 -68052122 + L1ME3 LINE L1 6118 6162 0 1201 129 12 0 chr20 4102545 4102708 -68051174 - AluSg/x SINE Alu -22 290 126 602 214 0 55 chr20 4102852 4102997 -68050885 + FLAM_A SINE Alu 6 142 0 1263 216 176 33 chr20 4103433 4103528 -68050354 - L1MC4a LINE L1 -6 7802 7722 2281 118 0 0 chr20 4103528 4103833 -68050049 - AluSq SINE Alu -8 305 1 1263 216 176 33 chr20 4103833 4104024 -68049858 - L1MC4a LINE L1 -86 7722 7560 679 198 71 85 chr20 4104024 4104072 -68049810 + MER3 DNA MER1_type 1 48 -161 2295 119 3 0 chr20 4104072 4104382 -68049500 + AluSp SINE Alu 1 311 -2 679 198 71 85 chr20 4104382 4104447 -68049435 + MER3 DNA MER1_type 48 112 -97 2533 93 0 0 chr20 4104447 4104759 -68049123 + AluSx SINE Alu 1 312 0 679 198 71 85 chr20 4104759 4104856 -68049026 + MER3 DNA MER1_type 112 209 0 1263 216 176 33 chr20 4104856 4104961 -68048921 - L1MC4a LINE L1 -248 7560 7354 2612 80 0 0 chr20 4105318 4105629 -68048253 + AluSx SINE Alu 1 311 -1 206 176 0 0 chr20 4105919 4105953 -68047929 - MIR SINE MIR -8 254 221 2322 92 3 0 chr20 4107589 4107881 -68046001 - AluSx SINE Alu -19 293 1 1150 261 116 62 chr20 4108193 4108690 -68045192 + L2 LINE L2 2294 2763 -550 2205 108 20 0 chr20 4108690 4108986 -68044896 - AluSq SINE Alu -11 302 1 1150 261 116 62 chr20 4108986 4109360 -68044522 + L2 LINE L2 2763 3250 -63 2649 49 10 0 chr20 4109479 4109786 -68044096 + AluY SINE Alu 1 310 -1 2294 69 31 3 chr20 4109798 4110087 -68043795 + AluSp SINE Alu 2 298 -15 2605 63 0 0 chr20 4110087 4110388 -68043494 + AluY SINE Alu 1 301 -10 1972 103 58 14 chr20 4110400 4110521 -68043361 + AluSx SINE Alu 1 115 -197 2099 142 0 22 chr20 4110521 4110839 -68043043 + AluSx SINE Alu 1 311 -1 1972 103 58 14 chr20 4110839 4111008 -68042874 + AluSx SINE Alu 115 304 -8 196 235 247 0 chr20 4111057 4111142 -68042740 - MIR SINE MIR -65 143 38 2347 106 3 7 chr20 4111156 4111457 -68042425 + AluSp SINE Alu 1 300 -13 2620 56 0 0 chr20 4111473 4111776 -68042106 - AluY SINE Alu -8 303 1 694 128 0 0 chr20 4112173 4112282 -68041600 - FLAM_A SINE Alu -4 138 30 2387 89 0 7 chr20 4112317 4112619 -68041263 - AluSg1 SINE Alu -7 302 3 2498 40 7 3 chr20 4112687 4112985 -68040897 + AluY SINE Alu 1 299 -12 1573 188 18 0 chr20 4112993 4113269 -68040613 + AluJo SINE Alu 1 281 -31 2166 97 7 36 chr20 4113270 4113579 -68040303 - AluSp SINE Alu -13 300 1 195 42 0 0 chr20 4113596 4113620 -68040262 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2202 108 7 13 chr20 4113622 4113927 -68039955 + AluSx SINE Alu 1 303 -9 2529 70 0 0 chr20 4114368 4114666 -68039216 - AluSc SINE Alu -7 302 5 1619 108 4 26 chr20 4115246 4115478 -68038404 - AluSg/x SINE Alu -4 306 80 417 115 0 0 chr20 4115478 4115539 -68038343 - Alu SINE Alu -16 295 235 2591 58 0 0 chr20 4115539 4115834 -68038048 - AluY SINE Alu -15 296 2 2054 111 42 3 chr20 4115835 4116124 -68037758 - AluSg SINE Alu -10 300 1 2494 83 0 6 chr20 4116233 4116547 -68037335 + AluSx SINE Alu 1 312 0 413 287 195 11 chr20 4116724 4116898 -68036984 + MIR SINE MIR 29 234 -28 478 303 0 19 chr20 4117401 4117556 -68036326 + MIR SINE MIR 30 181 -81 255 303 13 0 chr20 4117658 4117734 -68036148 + CT-rich Low_complexity Low_complexity 2 78 0 2175 90 47 13 chr20 4117879 4118179 -68035703 + AluY SINE Alu 1 310 -1 1999 153 33 0 chr20 4118270 4118571 -68035311 - AluJo SINE Alu -1 311 1 298 185 25 12 chr20 4118584 4118665 -68035217 + CT-rich Low_complexity Low_complexity 3 84 0 2425 73 0 16 chr20 4118707 4119010 -68034872 + AluSg SINE Alu 1 298 -12 2512 51 0 3 chr20 4119305 4119597 -68034285 - AluY SINE Alu -20 291 1 862 112 0 0 chr20 4119717 4119833 -68034049 - AluSg/x SINE Alu -21 291 176 2424 90 0 0 chr20 4119854 4120155 -68033727 - AluSp SINE Alu -12 301 1 2274 113 0 0 chr20 4120155 4120455 -68033427 - AluSg SINE Alu -10 300 1 1961 52 12 16 chr20 4120464 4120715 -68033167 - AluY SINE Alu -3 308 59 206 360 137 13 chr20 4122050 4122203 -68031679 - L2 LINE L2 -190 3082 2911 2299 89 7 0 chr20 4122208 4122517 -68031365 + AluSx SINE Alu 1 311 0 2372 69 14 0 chr20 4123087 4123378 -68030504 + AluSp SINE Alu 2 296 -17 2400 94 7 0 chr20 4123378 4123685 -68030197 + AluSx SINE Alu 1 309 -3 195 129 0 0 chr20 4124272 4124303 -68029579 + (A)n Simple_repeat Simple_repeat 1 31 0 2113 89 50 0 chr20 4124359 4124640 -68029242 + AluSq SINE Alu 2 296 -17 705 147 23 0 chr20 4124768 4124897 -68028985 - FLAM_A SINE Alu -1 132 1 257 167 0 0 chr20 4125603 4125645 -68028237 - AluSp SINE Alu -133 170 129 2152 110 7 3 chr20 4126174 4126475 -68027407 - AluSq SINE Alu -11 302 1 605 198 25 0 chr20 4127828 4127949 -68025933 - FLAM_C SINE Alu -8 125 2 1112 171 52 0 chr20 4128101 4128294 -68025588 - AluSq SINE Alu -110 203 1 21 0 0 0 chr20 4128297 4128318 -68025564 + AT_rich Low_complexity Low_complexity 1 21 0 1366 123 31 40 chr20 4128318 4128546 -68025336 - AluSx SINE Alu -86 226 1 1560 167 84 0 chr20 4128549 4128824 -68025058 - AluJb SINE Alu -14 298 1 351 271 76 0 chr20 4128825 4128943 -68024939 - MLT1B LTR MaLR -263 127 1 2387 85 3 0 chr20 4129107 4129401 -68024481 - AluSp SINE Alu -16 297 3 1413 216 35 47 chr20 4129401 4129803 -68024079 + MLT2C1 LTR ERVL 1 397 0 1405 131 0 10 chr20 4129891 4130089 -68023793 + AluSg/x SINE Alu 101 296 -16 1772 237 25 3 chr20 4130089 4130452 -68023430 + ERVL LTR ERVL 347 717 -5047 237 188 62 31 chr20 4130515 4130579 -68023303 - AluS SINE Alu -240 68 3 1078 192 103 48 chr20 4130582 4130873 -68023009 - MLT1A1 LTR MaLR -58 307 1 395 183 0 0 chr20 4130873 4130944 -68022938 + ERVL LTR ERVL 3883 3953 -1811 189 0 0 0 chr20 4131044 4131065 -68022817 + (TAAA)n Simple_repeat Simple_repeat 3 23 0 481 274 107 13 chr20 4131065 4131299 -68022583 + L1ME4a LINE L1 5865 6120 -1 861 143 0 0 chr20 4132047 4132180 -68021702 + FLAM_C SINE Alu 1 133 0 348 259 43 76 chr20 4132344 4132484 -68021398 - L3 LINE CR1 -64 1513 1379 2007 96 70 0 chr20 4132484 4132755 -68021127 + AluY SINE Alu 1 290 -21 348 259 43 76 chr20 4132755 4132799 -68021083 - L3 LINE CR1 -198 1379 1335 23 33 0 0 chr20 4133218 4133248 -68020634 + AT_rich Low_complexity Low_complexity 1 30 0 2320 172 19 28 chr20 4133333 4133798 -68020084 + LOR1b LTR ERV1 1 461 0 2444 80 0 32 chr20 4134404 4134715 -68019167 - AluSg SINE Alu -9 301 1 289 309 44 16 chr20 4134776 4135040 -68018842 - L1ME3A LINE L1 -222 5948 5671 332 220 35 165 chr20 4135050 4135122 -68018760 - MER112 DNA MER1_type -6 254 174 378 0 0 0 chr20 4135122 4135164 -68018718 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 332 220 35 165 chr20 4135164 4135291 -68018591 - MER112 DNA MER1_type -86 174 81 443 313 75 0 chr20 4135331 4135491 -68018391 - L1ME3A LINE L1 -514 5648 5477 278 314 24 0 chr20 4135562 4135686 -68018196 - HAL1 LINE L1 -923 1584 1458 10706 147 28 11 chr20 4135814 4138845 -68015037 + L1MA2 LINE L1 3218 6304 0 21 57 0 0 chr20 4138932 4138967 -68014915 + AT_rich Low_complexity Low_complexity 1 35 0 4502 171 27 32 chr20 4139291 4139626 -68014256 + L1MB5 LINE L1 5149 5484 -690 2354 80 0 29 chr20 4139626 4139961 -68013921 + AluSc SINE Alu 1 309 0 4502 171 27 32 chr20 4139961 4140092 -68013790 + L1MB5 LINE L1 5484 5614 -560 474 56 11 124 chr20 4140092 4140142 -68013740 - MADE1 DNA Mariner 0 80 43 2354 71 3 14 chr20 4140142 4140439 -68013443 + AluY SINE Alu 1 294 -17 474 56 11 124 chr20 4140439 4140477 -68013405 - MADE1 DNA Mariner -37 43 2 4502 171 27 32 chr20 4140477 4141038 -68012844 + L1MB5 LINE L1 5614 6168 -6 1696 149 88 0 chr20 4141042 4141371 -68012511 + L1MB8 LINE L1 5550 5907 -271 804 97 8 32 chr20 4141476 4141600 -68012282 + LTR12 LTR ERV1 153 273 -441 398 224 10 0 chr20 4141603 4141701 -68012181 + LTR30 LTR ERV1 544 642 -80 2495 83 0 0 chr20 4141701 4142028 -68011854 + pTR5 LTR ERV1 66 392 -2046 265 98 115 66 chr20 4142052 4142113 -68011769 - L1MEd LINE L1 -5732 387 324 2829 181 79 140 chr20 4142120 4142824 -68011058 + MER21A LTR ERV1 12 757 -174 1955 163 0 3 chr20 4142824 4143125 -68010757 + AluJo SINE Alu 1 300 -12 2829 181 79 140 chr20 4143125 4143244 -68010638 + MER21A LTR ERV1 757 770 -161 1911 141 20 23 chr20 4143244 4143543 -68010339 + AluSx SINE Alu 1 298 -14 2829 181 79 140 chr20 4143543 4143691 -68010191 + MER21A LTR ERV1 770 925 -6 2110 212 27 93 chr20 4146704 4147078 -68006804 - L1MA5 LINE L1 0 6178 5882 1748 159 0 11 chr20 4147078 4147355 -68006527 - AluSx SINE Alu -36 276 3 2110 212 27 93 chr20 4147355 4147758 -68006124 - L1MA5 LINE L1 -296 5882 5454 * 3247 157 11 3 chr20 4147757 4148323 -68005559 - L1MA5 LINE L1 -1134 5012 4443 638 218 59 63 chr20 4149770 4150009 -68003873 + LTR37A LTR ERV1 67 304 -122 2260 116 3 0 chr20 4150064 4150357 -68003525 - AluSx SINE Alu -18 294 1 2435 71 3 0 chr20 4150462 4150757 -68003125 - AluY SINE Alu -15 296 1 515 250 45 34 chr20 4150767 4150943 -68002939 - MIR SINE MIR -43 219 42 905 138 0 0 chr20 4151500 4151623 -68002259 - FLAM_C SINE Alu -20 123 1 461 106 115 0 chr20 4151852 4151956 -68001926 + AluYb8 SINE Alu 10 125 -193 9111 177 79 23 chr20 4152084 4153811 -68000071 - L1M1 LINE L1 -5719 1846 24 25 0 0 0 chr20 4153816 4153841 -68000041 + AT_rich Low_complexity Low_complexity 1 25 0 647 269 63 86 chr20 4154688 4154844 -67999038 + L1ME4a LINE L1 5408 5566 -555 198 103 0 0 chr20 4154844 4154873 -67999009 + (TG)n Simple_repeat Simple_repeat 2 30 0 647 269 63 86 chr20 4154873 4155158 -67998724 + L1ME4a LINE L1 5566 5839 -282 714 264 83 74 chr20 4156055 4156624 -67997258 - HAL1 LINE L1 -943 1564 991 558 167 0 39 chr20 4156677 4156779 -67997103 - U6 snRNA snRNA 0 107 10 302 313 62 53 chr20 4157055 4157282 -67996600 - L1MEd LINE L1 -5446 673 445 2085 120 38 0 chr20 4157835 4158127 -67995755 - AluSx SINE Alu -7 305 3 21 57 0 0 chr20 4158891 4158926 -67994956 + AT_rich Low_complexity Low_complexity 1 35 0 285 335 73 33 chr20 4159685 4159930 -67993952 - L3 LINE CR1 -12 1565 1311 1444 235 67 45 chr20 4160137 4160600 -67993282 + HsTC2a DNA Tc2 11 483 -261 17007 127 32 120 chr20 4160601 4164557 -67989325 + L1P LINE L1 12 3621 -2525 1829 177 7 0 chr20 4164844 4165143 -67988739 + AluJo SINE Alu 1 301 -11 2422 83 3 3 chr20 4165359 4165661 -67988221 + AluSc SINE Alu 1 302 -7 2339 102 3 3 chr20 4166120 4166433 -67987449 - AluSp SINE Alu 0 313 1 201 255 82 117 chr20 4166567 4166632 -67987250 + L2 LINE L2 1792 1858 -1456 2150 110 14 0 chr20 4166632 4166923 -67986959 - AluSx SINE Alu -17 295 1 201 255 82 117 chr20 4166923 4167053 -67986829 + L2 LINE L2 1858 1980 -1334 191 311 16 0 chr20 4167658 4167719 -67986163 - L2 LINE L2 -1346 1968 1907 523 185 11 0 chr20 4167720 4167812 -67986070 - Tigger7 DNA MER2_type -5 2486 2394 1408 171 57 0 chr20 4167813 4168041 -67985841 - Tigger7 DNA MER2_type -2222 265 25 405 250 61 46 chr20 4168041 4168237 -67985645 - L1M4 LINE L1 -2057 4089 3891 2379 78 0 0 chr20 4168246 4168540 -67985342 - AluSx SINE Alu -18 294 1 2483 132 57 43 chr20 4168666 4169158 -67984724 + LTR8A LTR ERV1 83 581 -146 1303 118 11 21 chr20 4169158 4169345 -67984537 + AluY SINE Alu 1 185 -126 2566 138 37 24 chr20 4169468 4170012 -67983870 + L1 LINE L1 4136 4686 -1460 2430 97 0 0 chr20 4170012 4170322 -67983560 - AluSg SINE Alu 0 310 1 552 200 5 116 chr20 4170322 4170537 -67983345 + L1MD2 LINE L1 6038 6228 -131 * 908 151 104 0 chr20 4170531 4170723 -67983159 + L1PA16 LINE L1 5938 6149 -17 353 246 108 0 chr20 4170737 4170867 -67983015 + L1MD2 LINE L1 6214 6357 -2 212 300 146 27 chr20 4172000 4172110 -67981772 + L3 LINE CR1 1231 1353 -224 244 263 26 9 chr20 4172121 4172235 -67981647 + (TA)n Simple_repeat Simple_repeat 2 117 0 2420 77 0 3 chr20 4172267 4172565 -67981317 - AluSc SINE Alu -11 298 2 22 0 0 0 chr20 4172570 4172592 -67981290 + AT_rich Low_complexity Low_complexity 1 22 0 263 229 36 6 chr20 4172596 4172762 -67981120 + (TA)n Simple_repeat Simple_repeat 2 172 0 2088 124 3 10 chr20 4173204 4173502 -67980380 - AluSx SINE Alu -16 296 1 1056 215 124 43 chr20 4173686 4174058 -67979824 + MER92B LTR ERV1 2 403 -233 436 213 0 0 chr20 4174077 4174171 -67979711 + MER92B LTR ERV1 543 636 0 25 0 0 0 chr20 4174353 4174378 -67979504 + AT_rich Low_complexity Low_complexity 1 25 0 21 36 0 0 chr20 4174818 4174846 -67979036 + AT_rich Low_complexity Low_complexity 1 28 0 534 270 60 75 chr20 4174964 4175216 -67978666 + MER102b DNA MER1_type 79 326 -15 442 236 156 47 chr20 4175492 4175704 -67978178 + MLT1H LTR MaLR 119 353 -196 312 179 40 11 chr20 4175749 4175855 -67978027 + MLT1H LTR MaLR 437 539 -10 189 0 0 0 chr20 4176026 4176047 -67977835 + (TG)n Simple_repeat Simple_repeat 2 22 0 300 290 153 6 chr20 4177342 4177518 -67976364 + MLT1K LTR MaLR 277 478 -110 2291 86 0 3 chr20 4177580 4177870 -67976012 + AluSx SINE Alu 1 289 -23 626 218 67 27 chr20 4178036 4178261 -67975621 - LTR16A1 LTR ERVL 0 457 224 362 228 24 31 chr20 4178316 4178443 -67975439 - LTR16A1 LTR ERVL -331 126 1 686 163 8 8 chr20 4178539 4178668 -67975214 + FRAM SINE Alu 40 168 -8 235 91 23 45 chr20 4178721 4178765 -67975117 - MLT1J LTR MaLR -378 133 91 198 272 112 32 chr20 4178819 4178944 -67974938 - MIR3 SINE MIR -41 167 33 1709 161 67 85 chr20 4180841 4181277 -67972605 + MSTA LTR MaLR 1 428 0 531 234 133 37 chr20 4181496 4181684 -67972198 - MIR SINE MIR -12 250 45 718 289 118 22 chr20 4182025 4182527 -67971355 + Charlie7 DNA MER1_type 12 561 -2051 353 307 125 66 chr20 4182899 4183218 -67970664 - HAL1 LINE L1 -1329 1178 841 2271 87 0 10 chr20 4183684 4183982 -67969900 - AluSq SINE Alu -13 300 6 2055 106 6 48 chr20 4184019 4184330 -67969552 - AluSq SINE Alu -15 298 1 204 67 0 0 chr20 4184584 4184614 -67969268 + (T)n Simple_repeat Simple_repeat 1 30 0 182 340 125 43 chr20 4185365 4185756 -67968126 - L2 LINE L2 -339 2975 2553 295 350 43 21 chr20 4185768 4185954 -67967928 - L2 LINE L2 -1285 2029 1840 216 292 99 109 chr20 4186240 4186432 -67967450 + L2 LINE L2 2632 2821 -493 1687 179 3 27 chr20 4186975 4187271 -67966611 + AluJo SINE Alu 1 289 -23 329 303 126 11 chr20 4187561 4187736 -67966146 - MIR SINE MIR -4 258 64 200 297 90 9 chr20 4188097 4188208 -67965674 + L2 LINE L2 2633 2752 -562 964 202 112 64 chr20 4188221 4188578 -67965304 + MLT1A2 LTR MaLR 1 374 0 2370 98 0 0 chr20 4188730 4189025 -67964857 - AluSq SINE Alu -18 295 1 208 315 18 45 chr20 4189074 4189185 -67964697 + L2 LINE L2 2988 3095 -218 1813 156 0 48 chr20 4189222 4189536 -67964346 - AluSx SINE Alu -13 299 1 1332 203 103 32 chr20 4189540 4189910 -67963972 + MLT1D LTR MaLR 108 503 -2 233 173 62 12 chr20 4192274 4192355 -67961527 + Charlie7 DNA MER1_type 2459 2543 -69 291 216 171 11 chr20 4192539 4192627 -67961255 - MIR SINE MIR -148 114 13 760 192 128 78 chr20 4193587 4194063 -67959819 + MLT1H LTR MaLR 5 545 -4 1862 137 4 11 chr20 4194210 4194481 -67959401 + AluSg SINE Alu 1 269 -41 272 320 109 34 chr20 4195044 4195191 -67958691 - L2 LINE L2 0 3272 3115 22 35 0 0 chr20 4195448 4195477 -67958405 + AT_rich Low_complexity Low_complexity 1 29 0 315 301 48 63 chr20 4196192 4196398 -67957484 + L2 LINE L2 1868 2070 -1244 21 36 0 0 chr20 4196915 4196943 -67956939 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr20 4197095 4197123 -67956759 + AT_rich Low_complexity Low_complexity 1 28 0 6655 179 34 40 chr20 4247657 4248314 -67905568 + L1MDa LINE L1 644 1303 -5237 2027 116 0 13 chr20 4248314 4248616 -67905266 + AluSx SINE Alu 1 298 -14 6655 179 34 40 chr20 4248616 4249352 -67904530 + L1MDa LINE L1 1303 2030 -4510 2245 100 3 6 chr20 4249352 4249663 -67904219 - AluSg SINE Alu 0 310 1 6655 179 34 40 chr20 4249663 4249757 -67904125 + L1MDa LINE L1 2030 2123 -4417 719 138 15 62 chr20 4249757 4249770 -67904112 - FLAM_C SINE Alu -175 137 125 2060 96 55 0 chr20 4249770 4250062 -67903820 - AluSc SINE Alu -1 308 1 719 138 15 62 chr20 4250062 4250178 -67903704 - FLAM_C SINE Alu -187 125 14 1443 139 60 168 chr20 4250178 4250221 -67903661 + L1MDa LINE L1 2117 2163 -4377 1979 90 0 4 chr20 4250221 4250488 -67903394 + AluSx SINE Alu 34 299 -13 2004 126 0 28 chr20 4250488 4250806 -67903076 + AluSg SINE Alu 1 309 -1 1443 139 60 168 chr20 4250806 4251385 -67902497 + L1MDa LINE L1 2161 2670 -3870 1032 158 0 0 chr20 4251386 4251550 -67902332 + FRAM SINE Alu 1 156 -20 4946 229 45 43 chr20 4251552 4253177 -67900705 + L1MDa LINE L1 2659 4287 -2253 2434 54 0 25 chr20 4253179 4253496 -67900386 + AluY SINE Alu 2 310 -1 2116 207 116 12 chr20 4253499 4253579 -67900303 + L1MB5 LINE L1 5022 5092 -1267 1298 283 59 14 chr20 4253579 4254003 -67899879 - LTR47B LTR ERVL 0 443 1 2116 207 116 12 chr20 4254003 4255111 -67898771 + L1MB5 LINE L1 5092 6356 -3 513 297 17 44 chr20 4255605 4255977 -67897905 - L2 LINE L2 -638 2676 2248 1553 132 4 24 chr20 4256656 4256907 -67896975 + AluJo SINE Alu 31 276 -36 24 0 0 0 chr20 4257019 4257043 -67896839 + AT_rich Low_complexity Low_complexity 1 24 0 360 0 0 0 chr20 4257873 4257913 -67895969 + (TG)n Simple_repeat Simple_repeat 2 41 0 286 257 14 0 chr20 4258651 4258721 -67895161 + LTR16A1 LTR ERVL 1 71 -386 966 235 39 8 chr20 4258733 4258988 -67894894 + LTR16A1 LTR ERVL 181 443 -14 295 315 30 46 chr20 4259277 4259357 -67894525 - MIR SINE MIR -61 201 121 798 170 113 0 chr20 4259357 4259516 -67894366 + MER69A DNA AcHobo 1 177 0 295 315 30 46 chr20 4259516 4259617 -67894265 - MIR SINE MIR -141 121 28 1974 187 113 25 chr20 4259981 4260357 -67893525 - MLT1H LTR MaLR 0 549 122 1928 176 26 57 chr20 4260357 4260782 -67893100 + MLT2D LTR ERVL 3 414 0 1974 187 113 25 chr20 4260782 4260875 -67893007 - MLT1H LTR MaLR -427 122 39 1391 159 40 22 chr20 4261193 4261470 -67892412 + AluJo SINE Alu 1 282 -30 283 266 106 9 chr20 4262152 4262265 -67891617 + MIR SINE MIR 29 152 -110 1408 234 151 19 chr20 4262272 4262704 -67891178 + LTR16C LTR ERVL 3 491 0 474 256 0 17 chr20 4263401 4263518 -67890364 + MER58 DNA MER1_type 5 119 -96 533 261 158 24 chr20 4263911 4264164 -67889718 + LTR33A LTR ERVL 235 521 -2 872 209 70 25 chr20 4264268 4264469 -67889413 + MER58A DNA MER1_type 15 224 0 462 272 154 12 chr20 4264474 4264636 -67889246 + MER5A DNA MER1_type 5 189 0 851 233 221 9 chr20 4264875 4265192 -67888690 + L1MC4a LINE L1 5437 5820 -1988 24 0 0 0 chr20 4265214 4265238 -67888644 + AT_rich Low_complexity Low_complexity 1 24 0 543 186 15 0 chr20 4265632 4265643 -67888239 + MER5A DNA MER1_type 6 18 -171 247 250 225 17 chr20 4265643 4265763 -67888119 - MER5A DNA MER1_type -2 187 43 1051 168 45 27 chr20 4267325 4267545 -67886337 + AluJo SINE Alu 70 293 -19 1771 194 78 99 chr20 4267552 4268089 -67885793 + MLT1H LTR MaLR 24 549 0 316 242 0 0 chr20 4268580 4268646 -67885236 + MER117 DNA MER1_type 93 158 -39 1485 179 96 67 chr20 4268698 4268837 -67885045 - Charlie4a DNA MER1_type -1500 461 328 1507 128 121 11 chr20 4268837 4269102 -67884780 + AluSg1 SINE Alu 1 294 -15 1485 179 96 67 chr20 4269102 4269409 -67884473 - Charlie4a DNA MER1_type -1633 328 2 382 340 55 47 chr20 4270095 4270439 -67883443 + LTR16C LTR ERVL 121 467 -24 286 254 0 0 chr20 4270484 4270543 -67883339 - MIR SINE MIR -78 130 72 23 33 0 0 chr20 4271395 4271425 -67882457 + AT_rich Low_complexity Low_complexity 1 30 0 2694 26 0 7 chr20 4271431 4271735 -67882147 - AluY SINE Alu -9 302 1 29 0 0 0 chr20 4271830 4271859 -67882023 + AT_rich Low_complexity Low_complexity 1 29 0 1152 180 29 130 chr20 4272072 4272318 -67881564 + L1ME3A LINE L1 5743 5926 -244 1672 135 40 72 chr20 4272318 4272622 -67881260 + AluJo SINE Alu 1 294 -18 1152 180 29 130 chr20 4272622 4272820 -67881062 + L1ME3A LINE L1 5926 6142 -28 252 299 14 75 chr20 4273702 4273849 -67880033 + L1MC4a LINE L1 5797 5934 -1874 2345 103 0 3 chr20 4273902 4274214 -67879668 + AluY SINE Alu 1 311 0 232 64 0 128 chr20 4274469 4274516 -67879366 + Alu SINE Alu 256 296 -6 2320 123 0 0 chr20 4274645 4274954 -67878928 - AluSx SINE Alu -3 309 1 1155 188 48 27 chr20 4274978 4275212 -67878670 + Charlie4a DNA MER1_type 42 270 -1691 1684 197 63 21 chr20 4275212 4275424 -67878458 - MSTD LTR MaLR 0 396 160 2059 142 0 26 chr20 4275424 4275623 -67878259 - AluSx SINE Alu -10 302 112 2521 67 3 0 chr20 4275623 4275920 -67877962 + AluY SINE Alu 1 298 -13 2059 142 0 26 chr20 4275920 4276030 -67877852 - AluSx SINE Alu -200 112 1 1684 197 63 21 chr20 4276030 4276197 -67877685 - MSTD LTR MaLR -236 160 1 1155 188 48 27 chr20 4276197 4276255 -67877627 + Charlie4a DNA MER1_type 270 340 -168 1079 135 18 127 chr20 4276268 4276434 -67877448 - AluJb SINE Alu -25 287 151 2358 109 7 0 chr20 4276434 4276738 -67877144 - AluSp SINE Alu -7 306 1 1079 135 18 127 chr20 4276738 4276800 -67877082 - AluJb SINE Alu -161 151 84 434 233 26 0 chr20 4276805 4276921 -67876961 - L1MA8 LINE L1 0 6291 6173 3787 143 40 5 chr20 4276921 4277570 -67876312 - L1MA6 LINE L1 -13 6287 5616 663 231 14 0 chr20 4277579 4277722 -67876160 + Charlie4a DNA MER1_type 354 498 -10 2506 142 33 26 chr20 4278935 4279303 -67874579 - MSTC LTR MaLR -3 425 61 426 20 0 0 chr20 4279303 4279354 -67874528 + (TTTC)n Simple_repeat Simple_repeat 2 52 0 2238 97 0 0 chr20 4279356 4279635 -67874247 - AluSc SINE Alu -30 279 1 2506 142 33 26 chr20 4279635 4279685 -67874197 - MSTC LTR MaLR -367 61 1 1383 242 170 52 chr20 4279836 4280636 -67873246 - L2 LINE L2 -24 3289 2370 2863 65 11 0 chr20 4280636 4280987 -67872895 + THE1A LTR MaLR 1 355 0 1383 242 170 52 chr20 4280987 4281020 -67872862 - L2 LINE L2 -943 2370 2342 2566 59 0 3 chr20 4281146 4281449 -67872433 + AluY SINE Alu 1 302 -9 851 206 16 0 chr20 4281462 4281646 -67872236 + L1ME2 LINE L1 5676 5862 -302 1084 184 0 11 chr20 4281724 4281909 -67871973 + AluJo SINE Alu 121 303 -9 501 294 100 12 chr20 4282758 4282918 -67870964 + LTR16C LTR ERVL 72 245 -246 * 547 184 9 9 chr20 4282917 4283031 -67870851 + LTR16C LTR ERVL 363 476 -15 272 270 0 0 chr20 4283291 4283354 -67870528 + MER117 DNA MER1_type 1 63 -134 378 347 41 14 chr20 4283580 4283727 -67870155 - MIR SINE MIR -84 178 28 1117 251 67 51 chr20 4284692 4285142 -67868740 - LTR16A1 LTR ERVL 0 457 1 2012 172 16 54 chr20 4285307 4285731 -67868151 + MLT2D LTR ERVL 7 414 0 227 298 193 0 chr20 4286680 4286794 -67867088 - MIR SINE MIR -79 183 48 23 0 0 0 chr20 4287052 4287075 -67866807 + AT_rich Low_complexity Low_complexity 1 23 0 943 226 74 36 chr20 4287138 4287475 -67866407 - L1ME3 LINE L1 -190 5972 5623 1777 181 70 79 chr20 4287537 4287855 -67866027 + MLT1C LTR MaLR 1 315 -152 2289 119 0 13 chr20 4287855 4288165 -67865717 + AluSx SINE Alu 1 306 -6 1777 181 70 79 chr20 4288165 4288317 -67865565 + MLT1C LTR MaLR 315 467 0 408 329 4 0 chr20 4288481 4288609 -67865273 - MIR SINE MIR -49 159 28 1479 132 106 0 chr20 4288997 4289232 -67864650 - AluJb SINE Alu -52 260 1 316 297 88 11 chr20 4289658 4289749 -67864133 - L2 LINE L2 -26 3246 3149 297 147 227 13 chr20 4289964 4290039 -67863843 - MIR SINE MIR -21 241 151 339 216 57 69 chr20 4290120 4290422 -67863460 + MLT1H LTR MaLR 151 409 0 569 248 90 0 chr20 4290430 4290563 -67863319 - MIR SINE MIR -116 146 2 336 228 8 16 chr20 4290600 4290727 -67863155 + (TA)n Simple_repeat Simple_repeat 1 126 0 740 268 111 34 chr20 4290735 4290775 -67863107 - L1ME3A LINE L1 -222 5948 5913 2174 109 3 0 chr20 4290775 4291089 -67862793 + AluSx SINE Alu 1 315 0 740 268 111 34 chr20 4291089 4291462 -67862420 - L1ME3A LINE L1 -257 5913 5502 427 279 22 0 chr20 4291462 4291598 -67862284 + LTR16A1 LTR ERVL 1 139 -318 209 213 0 21 chr20 4291754 4291801 -67862081 + GA-rich Low_complexity Low_complexity 3 48 0 228 167 0 0 chr20 4292601 4292649 -67861233 + (CA)n Simple_repeat Simple_repeat 2 49 0 604 213 8 8 chr20 4292807 4292929 -67860953 + MLT1D LTR MaLR 1 122 -383 1918 90 56 8 chr20 4292929 4293197 -67860685 + AluSx SINE Alu 21 301 -11 655 226 145 0 chr20 4293462 4293648 -67860234 - L1MD3 LINE L1 -378 7617 7405 24 0 0 0 chr20 4293657 4293681 -67860201 + AT_rich Low_complexity Low_complexity 1 24 0 722 200 0 36 chr20 4293681 4293821 -67860061 - FLAM_C SINE Alu -7 136 2 325 204 65 28 chr20 4293848 4293956 -67859926 - L1MD3 LINE L1 -792 7203 7092 460 221 159 0 chr20 4293962 4294075 -67859807 + MIR SINE MIR 121 251 -11 1035 135 29 92 chr20 4294422 4294629 -67859253 - AluJb SINE Alu -118 194 1 290 69 0 103 chr20 4294631 4294689 -67859193 + Tigger7 DNA MER2_type 2241 2292 -199 350 209 0 11 chr20 4294690 4294781 -67859101 + L1MD2 LINE L1 3861 3950 -2196 298 167 0 0 chr20 4294856 4294910 -67858972 - U6 snRNA snRNA -53 54 1 234 0 0 0 chr20 4294920 4294946 -67858936 + (T)n Simple_repeat Simple_repeat 1 26 0 288 0 0 0 chr20 4295034 4295066 -67858816 + (CA)n Simple_repeat Simple_repeat 2 33 0 1123 127 0 0 chr20 4295603 4295760 -67858122 - AluSq SINE Alu -13 300 144 2244 117 6 54 chr20 4295763 4296115 -67857767 + SVA Other Other 938 1272 -114 3171 134 49 28 chr20 4296115 4296644 -67857238 + LTR5 LTR ERVK 336 875 -94 6226 88 33 34 chr20 4296645 4298881 -67855001 - SVA Other Other -518 1386 33 5469 200 35 32 chr20 4298883 4299765 -67854117 + L1MD2 LINE L1 3941 4819 -1540 1811 172 3 16 chr20 4299765 4300068 -67853814 - AluJo SINE Alu -11 301 3 5469 200 35 32 chr20 4300068 4301263 -67852619 + L1MD2 LINE L1 4819 6040 -319 2138 105 0 3 chr20 4301263 4301578 -67852304 + AluSg SINE Alu 1 314 0 5469 200 35 32 chr20 4301578 4301899 -67851983 + L1MD2 LINE L1 6040 6359 0 1956 123 39 18 chr20 4302060 4302345 -67851537 + AluSq SINE Alu 1 291 -22 676 165 11 28 chr20 4302345 4302521 -67851361 + GA-rich Low_complexity Low_complexity 1 173 0 262 253 11 11 chr20 4302533 4302628 -67851254 + GA-rich Low_complexity Low_complexity 3 97 0 423 143 78 0 chr20 4303053 4303130 -67850752 + L1PB4 LINE L1 6066 6148 -8 2386 92 0 0 chr20 4303141 4303433 -67850449 + AluSx SINE Alu 2 293 -19 21 0 0 0 chr20 4303434 4303455 -67850427 + AT_rich Low_complexity Low_complexity 1 21 0 1934 128 54 10 chr20 4303514 4303811 -67850071 + AluJb SINE Alu 1 310 -2 1925 246 47 11 chr20 4304208 4304679 -67849203 + LTR16C LTR ERVL 2 489 -2 1011 238 22 11 chr20 4304700 4304969 -67848913 + L1ME1 LINE L1 5845 6116 -50 302 286 19 75 chr20 4305006 4305167 -67848715 - MIR3 SINE MIR -37 171 20 2131 221 128 27 chr20 4305343 4306017 -67847865 - HAL1 LINE L1 -701 1806 1039 219 69 0 0 chr20 4306017 4306046 -67847836 + (TG)n Simple_repeat Simple_repeat 2 30 0 2131 221 128 27 chr20 4306046 4306161 -67847721 - HAL1 LINE L1 -1468 1039 937 240 212 30 0 chr20 4307119 4307185 -67846697 - HAL1 LINE L1 -1593 914 847 1393 254 103 7 chr20 4307196 4307602 -67846280 + LTR16A1 LTR ERVL 4 448 -9 2061 255 98 45 chr20 4307606 4308411 -67845471 - HAL1 LINE L1 -1656 851 4 1706 141 0 12 chr20 4309215 4309488 -67844394 + AluSx SINE Alu 37 306 0 2464 82 0 3 chr20 4309489 4309794 -67844088 + AluSp SINE Alu 1 304 -9 820 314 24 14 chr20 4309795 4310085 -67843797 + LTR16C LTR ERVL 197 489 -2 2276 94 7 0 chr20 4310437 4310724 -67843158 + AluSg SINE Alu 10 298 -12 202 156 0 0 chr20 4311103 4311135 -67842747 - L2 LINE L2 -3 3269 3238 2459 88 3 0 chr20 4311313 4311619 -67842263 + AluSp SINE Alu 1 307 -6 196 224 245 41 chr20 4312488 4312586 -67841296 - L2 LINE L2 -31 3282 3165 1622 147 35 22 chr20 4312703 4313017 -67840865 - L1MC1 LINE L1 0 6333 6016 2322 100 3 0 chr20 4314267 4314566 -67839316 - AluSx SINE Alu -12 300 1 2564 49 0 16 chr20 4314645 4314952 -67838930 - AluY SINE Alu -9 302 1 37 52 0 0 chr20 4315130 4315188 -67838694 + GC_rich Low_complexity Low_complexity 1 58 0 25 31 0 0 chr20 4315324 4315356 -67838526 + GC_rich Low_complexity Low_complexity 1 32 0 342 0 0 0 chr20 4315967 4316005 -67837877 + (TG)n Simple_repeat Simple_repeat 1 38 0 2395 61 0 14 chr20 4316960 4317255 -67836627 + AluSq SINE Alu 1 291 -22 21 57 0 0 chr20 4317641 4317676 -67836206 + AT_rich Low_complexity Low_complexity 1 35 0 2148 122 0 28 chr20 4318293 4318614 -67835268 - AluSx SINE Alu 0 312 1 2561 206 137 48 chr20 4318757 4319690 -67834192 - HAL1 LINE L1 -121 2386 1371 329 154 125 140 chr20 4319701 4319837 -67834045 + MLT1G1 LTR MaLR 1 134 -461 2254 122 0 0 chr20 4320356 4320652 -67833230 - AluSg SINE Alu -14 296 1 396 0 0 0 chr20 4320652 4320696 -67833186 + (TTTG)n Simple_repeat Simple_repeat 4 47 0 1112 107 0 0 chr20 4320696 4320846 -67833036 - AluSg/x SINE Alu -32 280 131 23 0 0 0 chr20 4320880 4320903 -67832979 + AT_rich Low_complexity Low_complexity 1 23 0 685 313 132 38 chr20 4320987 4321540 -67832342 + L2 LINE L2 1214 1818 -1496 455 313 74 0 chr20 4321534 4321697 -67832185 + L2 LINE L2 3120 3294 -19 * 2344 83 3 3 chr20 4321900 4322188 -67831694 + AluSg1 SINE Alu 1 288 -21 665 36 100 0 chr20 4322188 4322437 -67831445 + (TA)n Simple_repeat Simple_repeat 1 273 0 733 222 78 39 chr20 4322447 4322677 -67831205 + MIR SINE MIR 24 262 0 1684 148 10 56 chr20 4322817 4323122 -67830760 - AluJb SINE Alu -21 291 1 2095 122 28 0 chr20 4324362 4324650 -67829232 - AluSx SINE Alu -16 296 1 239 301 240 0 chr20 4325498 4325644 -67828238 - MIR SINE MIR -54 208 28 789 211 95 81 chr20 4325903 4326331 -67827551 - MLT1D LTR MaLR -2 503 6 2391 100 0 6 chr20 4326800 4327111 -67826771 + AluSx SINE Alu 1 309 -3 2157 110 10 7 chr20 4327476 4327785 -67826097 + AluSg SINE Alu 1 310 0 21 36 0 0 chr20 4327943 4327971 -67825911 + AT_rich Low_complexity Low_complexity 1 28 0 2363 57 0 3 chr20 4328319 4328641 -67825241 - AluY SINE Alu 0 321 1 913 120 0 0 chr20 4328641 4328774 -67825108 - AluSg SINE Alu -177 133 1 1607 170 16 45 chr20 4328777 4329089 -67824793 - AluJo SINE Alu -9 303 1 2216 111 3 3 chr20 4329454 4329760 -67824122 - AluSx SINE Alu -6 306 1 2260 105 0 3 chr20 4330208 4330503 -67823379 - AluSq SINE Alu -19 294 1 1269 189 32 44 chr20 4330551 4330890 -67822992 - L1MB8 LINE L1 0 6178 5844 2276 99 3 3 chr20 4330959 4331272 -67822610 - AluSp SINE Alu 0 313 1 2134 136 3 0 chr20 4331636 4331946 -67821936 - AluSx SINE Alu -1 311 1 2296 85 0 32 chr20 4331959 4332140 -67821742 - AluSg SINE Alu -4 306 138 2436 99 0 0 chr20 4332140 4332452 -67821430 - AluSx SINE Alu 0 312 1 2296 85 0 32 chr20 4332452 4332586 -67821296 - AluSg SINE Alu -172 138 1 189 252 0 0 chr20 4332778 4332832 -67821050 + MIR SINE MIR 102 156 -52 1669 201 3 0 chr20 4333021 4333314 -67820568 + AluJb SINE Alu 3 296 -16 594 206 169 94 chr20 4333431 4333489 -67820393 - MLT1J LTR MaLR -19 492 440 2369 66 0 38 chr20 4333489 4333806 -67820076 - AluSc SINE Alu -4 305 1 594 206 169 94 chr20 4333806 4334184 -67819698 - MLT1J LTR MaLR -71 440 23 21 0 0 0 chr20 4334376 4334397 -67819485 + AT_rich Low_complexity Low_complexity 1 21 0 1189 140 144 0 chr20 4336659 4336916 -67816966 + L1MD3 LINE L1 7694 7987 -8 2212 110 3 0 chr20 4337158 4337450 -67816432 + AluSx SINE Alu 1 293 -19 435 274 47 1 chr20 4337450 4337590 -67816292 + MIR SINE MIR 46 191 -60 285 29 0 0 chr20 4338783 4338817 -67815065 + (TG)n Simple_repeat Simple_repeat 2 35 0 27 29 0 0 chr20 4338934 4338968 -67814914 + AT_rich Low_complexity Low_complexity 1 34 0 2182 117 0 3 chr20 4339198 4339497 -67814385 + AluY SINE Alu 6 303 -8 27 0 0 0 chr20 4339501 4339528 -67814354 + AT_rich Low_complexity Low_complexity 1 27 0 700 248 113 72 chr20 4339732 4339850 -67814032 - L1MC4a LINE L1 -1868 5940 5828 1419 191 3 66 chr20 4339850 4340169 -67813713 - AluJo SINE Alu -13 299 1 700 248 113 72 chr20 4340169 4340465 -67813417 - L1MC4a LINE L1 -1980 5828 5509 34 65 0 0 chr20 4340540 4340602 -67813280 + AT_rich Low_complexity Low_complexity 1 62 0 1148 275 42 21 chr20 4340784 4341170 -67812712 - MLT1I LTR MaLR 0 409 16 2616 55 0 0 chr20 4341228 4341535 -67812347 - AluY SINE Alu -4 307 1 313 250 81 32 chr20 4341652 4341776 -67812106 - L1MC4a LINE L1 -1543 4603 4474 1911 166 3 0 chr20 4341986 4342287 -67811595 + AluJo SINE Alu 1 302 -10 1866 190 0 3 chr20 4342394 4342704 -67811178 - AluJb SINE Alu -3 309 1 27 0 0 0 chr20 4342713 4342740 -67811142 + AT_rich Low_complexity Low_complexity 1 27 0 834 193 12 36 chr20 4343673 4343839 -67810043 + FRAM SINE Alu 1 162 -14 1835 113 0 16 chr20 4343839 4344095 -67809787 + AluSc SINE Alu 44 295 -14 1774 146 4 18 chr20 4344189 4344464 -67809418 + AluJb SINE Alu 2 272 -40 313 160 0 27 chr20 4344465 4344540 -67809342 + GA-rich Low_complexity Low_complexity 4 76 0 1606 74 34 176 chr20 4344692 4345045 -67808837 + AluSp SINE Alu 1 303 0 624 220 0 0 chr20 4345361 4345479 -67808403 + FLAM_A SINE Alu 5 122 -11 183 42 0 0 chr20 4345680 4345704 -67808178 + (TTG)n Simple_repeat Simple_repeat 2 25 0 1412 183 102 25 chr20 4346482 4346766 -67807116 - AluJo SINE Alu -4 308 3 2464 94 0 0 chr20 4346779 4347086 -67806796 - AluSx SINE Alu -5 307 1 280 287 65 33 chr20 4347291 4347536 -67806346 + L1M4 LINE L1 4296 4532 -1614 1294 182 81 86 chr20 4347536 4347842 -67806040 - MSTD LTR MaLR -3 393 87 1616 188 3 24 chr20 4347842 4348140 -67805742 - AluJb SINE Alu -20 292 1 2354 86 0 10 chr20 4348148 4348449 -67805433 - AluSg SINE Alu -12 298 1 1294 182 81 86 chr20 4348449 4348528 -67805354 - MSTD LTR MaLR -316 80 1 280 287 65 33 chr20 4348528 4348589 -67805293 + L1M4 LINE L1 4532 4612 -1534 288 0 0 0 chr20 4348609 4348641 -67805241 + (GA)n Simple_repeat Simple_repeat 1 32 0 1622 163 42 0 chr20 4348644 4348908 -67804974 - AluJb SINE Alu -37 275 1 1365 98 0 11 chr20 4349056 4349240 -67804642 + AluSc SINE Alu 118 299 -10 338 317 140 27 chr20 4349269 4349455 -67804427 + L1M4 LINE L1 4882 5088 -1058 575 243 92 23 chr20 4349815 4350033 -67803849 - Charlie8 DNA MER1_type -2184 233 1 1206 201 67 16 chr20 4350129 4350383 -67803499 + Tigger7 DNA MER2_type 1 267 -466 413 198 0 0 chr20 4350390 4350471 -67803411 + Tigger7 DNA MER2_type 2411 2491 0 350 290 81 91 chr20 4350703 4351037 -67802845 - L1M4 LINE L1 -2947 3199 2869 2124 107 3 17 chr20 4351037 4351356 -67802526 - AluSq SINE Alu 0 315 1 350 290 81 91 chr20 4351356 4351561 -67802321 - L1M4 LINE L1 -3277 2869 2664 24 0 0 0 chr20 4351606 4351630 -67802252 + AT_rich Low_complexity Low_complexity 1 24 0 2092 95 50 0 chr20 4351638 4351921 -67801961 - AluSx SINE Alu -15 297 1 446 265 101 39 chr20 4351965 4352222 -67801660 - L1M4 LINE L1 -3706 2440 2168 803 115 79 6 chr20 4352223 4352388 -67801494 - L1MA4 LINE L1 -22 6278 6102 1822 99 122 0 chr20 4352409 4352672 -67801210 + AluSg SINE Alu 1 295 -5 489 200 54 8 chr20 4352679 4352809 -67801073 - L1MA4 LINE L1 -155 6145 6010 2461 57 3 0 chr20 4352863 4353161 -67800721 - AluY SINE Alu -12 299 1 315 237 0 92 chr20 4353597 4353728 -67800154 - HAL1b LINE L1 -819 529 450 1005 177 25 0 chr20 4353731 4353929 -67799953 - L1MD1 LINE L1 0 6636 6434 3285 160 21 5 chr20 4353941 4354548 -67799334 - L1MD1 LINE L1 -318 6318 5702 642 138 0 18 chr20 4354548 4354657 -67799225 - MLT1C LTR MaLR -7 460 354 1371 158 0 0 chr20 4354658 4354860 -67799022 + AluSx SINE Alu 1 202 -110 720 172 71 65 chr20 4354874 4355187 -67798695 - MLT1C LTR MaLR -113 354 2 8277 208 98 76 chr20 4355190 4357515 -67796367 - L1MD1 LINE L1 -841 5699 3428 2260 117 0 0 chr20 4357515 4357824 -67796058 - AluSq SINE Alu -4 309 1 2179 100 0 20 chr20 4357825 4358126 -67795756 - AluSx SINE Alu -17 295 1 8277 208 98 76 chr20 4358126 4359794 -67794088 - L1MD1 LINE L1 -3112 3428 1800 1426 112 0 0 chr20 4359794 4359981 -67793901 - AluSq SINE Alu -126 187 1 8277 208 98 76 chr20 4359981 4360763 -67793119 - L1MD1 LINE L1 -4740 1800 1037 1717 77 0 0 chr20 4360763 4360971 -67792911 + AluSc SINE Alu 88 295 -14 8277 208 98 76 chr20 4360971 4361470 -67792412 - L1MD1 LINE L1 -5503 1037 14 737 248 67 50 chr20 4361536 4361774 -67792108 - MIR SINE MIR 0 262 21 1569 197 7 30 chr20 4362118 4362418 -67791464 - AluJo SINE Alu -19 293 1 2131 96 17 3 chr20 4362430 4362721 -67791161 - AluSg SINE Alu -15 295 1 2178 96 51 0 chr20 4362738 4363030 -67790852 - AluSc SINE Alu -1 308 2 342 0 0 0 chr20 4364237 4364275 -67789607 + (CA)n Simple_repeat Simple_repeat 2 39 0 273 283 44 96 chr20 4364304 4364529 -67789353 - MIR3 SINE MIR -45 217 2 2216 125 3 3 chr20 4364582 4364893 -67788989 - AluSx SINE Alu -1 311 1 197 283 102 58 chr20 4365791 4365927 -67787955 + MIR SINE MIR 2 156 -52 1862 154 27 14 chr20 4365927 4366220 -67787662 + AluJb SINE Alu 1 297 -15 197 283 102 58 chr20 4366220 4366275 -67787607 + MIR SINE MIR 156 207 -1 295 211 53 66 chr20 4366505 4366581 -67787301 + L2 LINE L2 3239 3313 0 2270 115 0 0 chr20 4367252 4367556 -67786326 + AluSx SINE Alu 1 304 -8 2047 108 42 0 chr20 4367746 4368032 -67785850 + AluSq SINE Alu 1 298 -15 1682 180 7 11 chr20 4368367 4368674 -67785208 - AluJb SINE Alu 0 306 1 21 57 0 0 chr20 4369016 4369051 -67784831 + AT_rich Low_complexity Low_complexity 1 35 0 1769 186 17 0 chr20 4369324 4369625 -67784257 - AluJo SINE Alu -6 306 1 1913 104 86 7 chr20 4369652 4369931 -67783951 + AluSx SINE Alu 1 301 -11 2218 90 0 0 chr20 4370054 4370357 -67783525 - AluSc SINE Alu 0 303 1 402 244 33 11 chr20 4370828 4370918 -67782964 + L2 LINE L2 3222 3313 0 524 208 154 41 chr20 4370924 4371145 -67782737 + HAL1 LINE L1 2261 2506 -1 620 136 10 0 chr20 4371156 4371259 -67782623 + L1MA4 LINE L1 6184 6287 -13 499 334 156 53 chr20 4371320 4371803 -67782079 - L2 LINE L2 -715 2599 2167 2220 114 3 0 chr20 4371803 4372092 -67781790 + AluSx SINE Alu 1 290 -22 499 334 156 53 chr20 4372092 4372907 -67780975 - L2 LINE L2 -1147 2167 1167 32 0 0 0 chr20 4373242 4373274 -67780608 + AT_rich Low_complexity Low_complexity 1 32 0 1588 153 55 49 chr20 4373259 4373434 -67780448 - AluJb SINE Alu -2 310 131 2146 97 7 17 chr20 4373434 4373734 -67780148 - AluSx SINE Alu -15 297 1 1588 153 55 49 chr20 4373734 4373866 -67780016 - AluJb SINE Alu -181 131 1 819 210 56 80 chr20 4373994 4374456 -67779426 + L1ME3 LINE L1 2991 3441 -2705 4019 209 24 15 chr20 4374479 4375405 -67778477 + L1MB5 LINE L1 4012 4945 -1201 * 4307 170 56 12 chr20 4375402 4375828 -67778054 + L1MB5 LINE L1 5160 5566 -608 2083 109 17 3 chr20 4375828 4376122 -67777760 - AluSg SINE Alu -12 298 1 4307 170 56 12 chr20 4376122 4376650 -67777232 + L1MB5 LINE L1 5566 6155 -19 2236 98 3 0 chr20 4376689 4376985 -67776897 + AluSx SINE Alu 1 297 -15 1745 109 4 0 chr20 4377037 4377284 -67776598 + AluSg SINE Alu 55 302 -8 2179 83 7 7 chr20 4377293 4377594 -67776288 + AluY SINE Alu 1 301 -10 1857 248 184 55 chr20 4377648 4378734 -67775148 + L1ME3 LINE L1 3552 4777 -1369 2155 169 200 142 chr20 4378734 4379488 -67774394 + L1MC4a LINE L1 6678 7514 -294 2287 80 0 7 chr20 4379488 4379789 -67774093 + AluY SINE Alu 1 299 -12 2155 169 200 142 chr20 4379789 4380102 -67773780 + L1MC4a LINE L1 7514 7807 -1 1686 229 22 22 chr20 4380136 4380542 -67773340 - MLT1C LTR MaLR -3 464 59 1059 253 42 31 chr20 4380589 4380973 -67772909 + L1ME3 LINE L1 4780 5167 -979 1925 130 10 3 chr20 4381048 4381341 -67772541 - AluJb SINE Alu -17 295 1 2094 115 0 0 chr20 4381352 4381647 -67772235 - AluSx SINE Alu -17 295 1 2039 225 50 11 chr20 4381659 4382180 -67771702 + L1ME3 LINE L1 5616 6156 -6 2458 59 3 0 chr20 4382673 4382980 -67770902 - AluSp SINE Alu -5 308 1 2144 90 3 13 chr20 4383534 4383834 -67770048 - AluSc SINE Alu -12 297 1 1211 100 45 68 chr20 4384032 4384252 -67769630 - AluJb SINE Alu -11 301 87 1701 134 48 4 chr20 4384264 4384560 -67769322 - AluJb SINE Alu 0 308 1 2276 97 0 0 chr20 4385012 4385312 -67768570 - AluSq SINE Alu -13 300 1 21 57 0 0 chr20 4386358 4386393 -67767489 + AT_rich Low_complexity Low_complexity 1 35 0 2258 102 0 0 chr20 4386514 4386817 -67767065 - AluSx SINE Alu -9 303 1 1444 240 12 30 chr20 4387155 4387559 -67766323 - L1M4 LINE L1 -1253 5287 4891 * 2972 185 65 131 chr20 4387548 4387630 -67766252 - L1MDa LINE L1 -3660 2880 2794 2046 118 3 0 chr20 4387630 4387926 -67765956 + AluSq SINE Alu 2 298 -15 2972 185 65 131 chr20 4387926 4387972 -67765910 - L1MDa LINE L1 -3746 2794 2747 2375 52 0 3 chr20 4387972 4388260 -67765622 + AluY SINE Alu 1 287 -24 2972 185 65 131 chr20 4388260 4388276 -67765606 - L1MDa LINE L1 -3793 2747 2732 1827 169 0 0 chr20 4388276 4388571 -67765311 + AluJo SINE Alu 1 295 -17 2972 185 65 131 chr20 4388571 4388641 -67765241 - L1MDa LINE L1 -3808 2732 2659 2231 109 3 0 chr20 4388641 4388952 -67764930 - AluSx SINE Alu 0 312 1 2972 185 65 131 chr20 4388952 4389485 -67764397 - L1MDa LINE L1 -3881 2659 2092 1127 189 26 21 chr20 4389485 4389718 -67764164 + AluJb SINE Alu 64 297 -15 2972 185 65 131 chr20 4389718 4390486 -67763396 - L1MDa LINE L1 -4448 2092 1308 1823 161 3 0 chr20 4390487 4390779 -67763103 + AluSp SINE Alu 1 293 -20 3594 201 42 38 chr20 4390785 4391453 -67762429 + L1M4 LINE L1 4379 5043 -1103 760 181 8 0 chr20 4391453 4391580 -67762302 + FLAM_A SINE Alu 1 128 -5 3594 201 42 38 chr20 4391580 4391692 -67762190 + L1M4 LINE L1 5043 5153 -993 1630 132 16 55 chr20 4391692 4392003 -67761879 + AluJo SINE Alu 1 299 -13 3594 201 42 38 chr20 4392003 4392148 -67761734 + L1M4 LINE L1 5153 5309 -837 466 133 133 9 chr20 4392153 4392266 -67761616 - L1M4 LINE L1 -912 5234 5108 424 214 19 10 chr20 4392319 4392422 -67761460 - L1M4 LINE L1 -1199 4947 4844 * 4260 172 66 27 chr20 4392419 4393311 -67760571 + L1MB7 LINE L1 5240 6165 -19 2171 97 0 7 chr20 4393608 4393906 -67759976 + AluSc SINE Alu 1 296 -13 215 254 104 0 chr20 4394088 4394155 -67759727 - MIR SINE MIR -82 180 107 229 277 92 0 chr20 4394371 4394490 -67759392 - MIR SINE MIR -62 146 17 227 260 26 52 chr20 4394703 4394780 -67759102 - L2 LINE L2 -675 2639 2565 334 286 53 30 chr20 4394853 4394986 -67758896 + MIR3 SINE MIR 41 176 -32 209 224 20 0 chr20 4397601 4397650 -67756232 + CT-rich Low_complexity Low_complexity 2 51 0 216 0 0 0 chr20 4397657 4397681 -67756201 + (A)n Simple_repeat Simple_repeat 1 24 0 192 254 119 79 chr20 4400148 4400274 -67753608 + MIR SINE MIR 56 186 -76 1070 149 47 42 chr20 4401337 4401552 -67752330 - AluJo SINE Alu -16 296 81 2064 97 13 26 chr20 4401590 4401900 -67751982 + AluSx SINE Alu 1 306 -6 2332 66 30 0 chr20 4401967 4402269 -67751613 - AluY SINE Alu 0 311 1 2056 89 16 20 chr20 4403783 4404087 -67749795 - AluSx SINE Alu -9 303 1 203 305 49 12 chr20 4405120 4405202 -67748680 - L2 LINE L2 -1349 1965 1881 1963 109 11 0 chr20 4405211 4405495 -67748387 + AluSx SINE Alu 1 287 -25 352 254 71 40 chr20 4405633 4405759 -67748123 + MIR SINE MIR 23 152 -110 1829 137 13 7 chr20 4408736 4409035 -67744847 + AluSx SINE Alu 1 301 -11 23 0 0 0 chr20 4409208 4409231 -67744651 + AT_rich Low_complexity Low_complexity 1 23 0 1734 63 5 0 chr20 4409470 4409692 -67744190 + L1PA5 LINE L1 5931 6153 -1 2220 91 7 0 chr20 4409883 4410180 -67743702 - AluSp SINE Alu -14 299 1 1994 104 19 35 chr20 4410199 4410515 -67743367 - AluSx SINE Alu -1 311 1 1831 149 3 23 chr20 4411536 4411844 -67742038 + AluSx SINE Alu 4 305 -7 255 328 54 32 chr20 4412568 4412754 -67741128 + L1ME LINE L1 5524 5713 -408 804 110 28 0 chr20 4413088 4413197 -67740685 - AluY SINE Alu -198 113 2 234 0 0 0 chr20 4413649 4413675 -67740207 + (TG)n Simple_repeat Simple_repeat 1 26 0 2028 108 0 0 chr20 4413675 4413953 -67739929 - AluSx SINE Alu -33 279 2 1281 211 192 53 chr20 4414466 4414935 -67738947 - MLT1H LTR MaLR 0 549 16 872 251 40 12 chr20 4419040 4419287 -67734595 + MIR SINE MIR 9 262 0 1271 113 35 15 chr20 4419312 4419515 -67734367 + AluJo SINE Alu 90 296 -16 2046 118 3 0 chr20 4420258 4420554 -67733328 + AluSx SINE Alu 1 297 -15 1002 149 0 39 chr20 4420620 4420801 -67733081 + AluSg/x SINE Alu 119 292 -18 1216 176 112 32 chr20 4420912 4421074 -67732808 - AluJo SINE Alu -8 304 156 2391 62 0 3 chr20 4421074 4421378 -67732504 - AluY SINE Alu -8 303 1 1216 176 112 32 chr20 4421378 4421493 -67732389 - AluJo SINE Alu -156 156 5 2124 105 10 0 chr20 4421505 4421809 -67732073 - AluSx SINE Alu -5 307 1 903 150 0 0 chr20 4422423 4422582 -67731300 + FLAM_C SINE Alu 1 159 0 495 214 23 30 chr20 4422655 4422786 -67731096 - L1MC5 LINE L1 -51 7910 7781 2169 102 3 0 chr20 4422792 4423086 -67730796 - AluSq SINE Alu -18 295 1 508 217 19 0 chr20 4423809 4423915 -67729967 - MIR SINE MIR -25 237 130 1640 179 7 0 chr20 4424063 4424342 -67729540 + AluJo SINE Alu 1 281 -31 268 235 141 0 chr20 4424721 4424806 -67729076 - L2 LINE L2 -6 3307 3211 1628 249 70 50 chr20 4424993 4425067 -67728815 + L1ME3A LINE L1 5483 5554 -616 1750 181 27 51 chr20 4425067 4425156 -67728726 + MLT1A1 LTR MaLR 1 91 -274 1965 131 3 7 chr20 4425156 4425453 -67728429 + AluSx SINE Alu 1 296 -16 1750 181 27 51 chr20 4425453 4425734 -67728148 + MLT1A1 LTR MaLR 91 362 -3 1628 249 70 50 chr20 4425734 4426258 -67727624 + L1ME3A LINE L1 5554 6093 -77 1289 195 80 33 chr20 4426279 4426725 -67727157 - MER89 LTR ERV1 0 559 3 183 319 0 0 chr20 4426900 4426947 -67726935 + L2 LINE L2 3001 3047 -225 1549 189 3 7 chr20 4427037 4427338 -67726544 + AluJo SINE Alu 1 300 -12 23 0 0 0 chr20 4427372 4427395 -67726487 + AT_rich Low_complexity Low_complexity 1 23 0 1675 172 7 7 chr20 4428267 4428569 -67725313 - AluJo SINE Alu -6 306 5 1213 253 43 16 chr20 4428652 4429003 -67724879 + L1MC4a LINE L1 5560 5923 -1885 1641 100 21 8 chr20 4429003 4429243 -67724639 + AluSc SINE Alu 1 243 -66 1213 253 43 16 chr20 4429243 4429262 -67724620 + L1MC4a LINE L1 5923 5940 -1868 544 122 55 216 chr20 4429284 4429318 -67724564 + L1MC5 LINE L1 6923 6961 -1000 2101 96 3 26 chr20 4429318 4429453 -67724429 + AluSg SINE Alu 1 138 -172 1968 72 14 51 chr20 4429453 4429770 -67724112 + AluY SINE Alu 3 308 0 2101 96 3 26 chr20 4429770 4429946 -67723936 + AluSg SINE Alu 138 306 -4 1993 122 7 0 chr20 4429948 4430243 -67723639 + AluSx SINE Alu 3 299 -13 544 122 55 216 chr20 4430243 4430460 -67723422 + L1MC5 LINE L1 6962 7136 -825 1846 124 3 14 chr20 4430460 4430742 -67723140 + AluSx SINE Alu 1 279 -33 360 0 0 0 chr20 4430742 4430782 -67723100 + (CA)n Simple_repeat Simple_repeat 1 40 0 1612 151 0 25 chr20 4430960 4431239 -67722643 + AluJo SINE Alu 35 306 -6 2172 104 7 0 chr20 4431297 4431594 -67722288 + AluSp SINE Alu 1 299 -14 462 161 129 0 chr20 4431664 4431757 -67722125 - FLAM_A SINE Alu -18 124 20 2260 75 0 30 chr20 4431896 4432201 -67721681 + AluY SINE Alu 1 296 -15 1968 102 46 0 chr20 4432424 4432707 -67721175 - AluSx SINE Alu -16 296 1 2113 89 0 17 chr20 4432896 4433188 -67720694 - AluSg1 SINE Alu -20 289 3 549 110 12 12 chr20 4433192 4433274 -67720608 - AluSg/x SINE Alu -19 290 209 1776 159 7 0 chr20 4433493 4433789 -67720093 + AluJb SINE Alu 1 298 -14 2415 50 0 10 chr20 4433790 4434090 -67719792 + AluY SINE Alu 1 297 -14 1989 109 30 10 chr20 4434098 4434400 -67719482 + AluSx SINE Alu 1 308 -4 2065 89 0 0 chr20 4434539 4434808 -67719074 + AluSp SINE Alu 34 302 -11 263 351 123 9 chr20 4434907 4434931 -67718951 - L2 LINE L2 -449 2865 2845 2485 61 0 6 chr20 4434931 4435243 -67718639 + AluY SINE Alu 2 311 0 263 351 123 9 chr20 4435243 4435446 -67718436 - L2 LINE L2 -469 2845 2612 2536 46 0 0 chr20 4435497 4435802 -67718080 - AluY SINE Alu -4 307 3 1812 138 14 0 chr20 4435852 4436143 -67717739 - AluJb SINE Alu -17 295 1 1858 120 22 0 chr20 4436172 4436480 -67717402 + AluSx SINE Alu 1 314 0 2047 117 3 0 chr20 4437125 4437424 -67716458 - AluSx SINE Alu -12 300 1 2140 202 90 12 chr20 4437567 4438047 -67715835 + MLT1F LTR MaLR 14 530 -12 2371 70 3 0 chr20 4438292 4438594 -67715288 - AluY SINE Alu -8 303 1 34 24 0 0 chr20 4438596 4438637 -67715245 + AT_rich Low_complexity Low_complexity 1 41 0 414 198 119 8 chr20 4438705 4438831 -67715051 - L1ME3A LINE L1 -9 6161 6022 2134 118 0 3 chr20 4438846 4439151 -67714731 - AluSx SINE Alu -8 304 1 25 0 0 0 chr20 4439151 4439176 -67714706 + AT_rich Low_complexity Low_complexity 1 25 0 2065 96 6 25 chr20 4439206 4439520 -67714362 - AluSg SINE Alu -2 308 1 180 315 0 19 chr20 4439567 4439621 -67714261 + MIR SINE MIR 58 110 -98 904 111 131 0 chr20 4440137 4440290 -67713592 - AluSp SINE Alu -8 305 133 1660 149 6 43 chr20 4442942 4443265 -67710617 - AluJo SINE Alu -1 311 1 420 272 194 11 chr20 4443278 4443458 -67710424 - MIR SINE MIR -48 214 2 2057 101 10 26 chr20 4443959 4444266 -67709616 + AluSx SINE Alu 1 302 -10 1458 75 10 10 chr20 4444397 4444597 -67709285 + AluSg/x SINE Alu 98 297 -12 258 311 40 0 chr20 4444756 4444830 -67709052 + MER5A DNA MER1_type 76 152 -37 685 297 48 9 chr20 4444939 4445168 -67708714 - MIR SINE MIR -5 257 20 226 121 379 0 chr20 4445301 4445367 -67708515 - L1ME1 LINE L1 -4 6162 6072 2046 132 7 0 chr20 4445826 4446136 -67707746 - AluSq SINE Alu -1 312 1 2184 97 10 0 chr20 4446145 4446445 -67707437 - AluSp SINE Alu -10 303 1 1121 148 0 0 chr20 4446478 4446654 -67707228 - AluSg/x SINE Alu -6 306 131 1570 160 19 0 chr20 4446914 4447210 -67706672 + AluSx SINE Alu 13 313 0 835 136 0 102 chr20 4447211 4447388 -67706494 + AluJo SINE Alu 124 282 -30 204 40 0 0 chr20 4447390 4447415 -67706467 + (T)n Simple_repeat Simple_repeat 1 25 0 2156 73 0 54 chr20 4447968 4448283 -67705599 - AluY SINE Alu -13 298 1 3494 191 109 19 chr20 4448312 4449094 -67704788 + MER21B LTR ERV1 1 852 -11 1737 150 29 26 chr20 4449324 4449631 -67704251 + AluJb SINE Alu 1 308 -4 1944 118 14 7 chr20 4449632 4449921 -67703961 + AluSx SINE Alu 3 293 -19 343 273 188 13 chr20 4449941 4450095 -67703787 - L1M4 LINE L1 -2207 3939 3759 2047 122 7 0 chr20 4450098 4450401 -67703481 - AluSx SINE Alu -3 309 5 319 251 166 33 chr20 4450423 4450730 -67703152 - L1M4 LINE L1 -3116 3030 2683 2043 113 7 3 chr20 4450778 4451079 -67702803 - AluSg SINE Alu -8 302 1 1909 139 7 3 chr20 4451082 4451376 -67702506 - AluSx SINE Alu -17 295 1 2291 70 10 0 chr20 4451609 4451909 -67701973 - AluY SINE Alu -8 303 1 28 0 0 0 chr20 4452655 4452683 -67701199 + AT_rich Low_complexity Low_complexity 1 28 0 2013 96 0 4 chr20 4452684 4452955 -67700927 - AluSx SINE Alu -22 290 21 1446 163 48 4 chr20 4452959 4453253 -67700629 - AluJo SINE Alu 0 306 1 533 235 161 23 chr20 4453662 4453922 -67699960 - HAL1 LINE L1 -821 1686 1391 959 181 42 28 chr20 4454069 4454284 -67699598 - AluJo SINE Alu -9 303 86 406 156 16 0 chr20 4454285 4454349 -67699533 - AluSx SINE Alu -52 250 186 397 107 0 0 chr20 4454343 4454399 -67699483 - AluSx SINE Alu -162 141 86 * 1085 198 0 31 chr20 4454399 4454626 -67699256 - AluJo SINE Alu -92 220 1 305 242 0 21 chr20 4454782 4454807 -67699075 - L1MA10 LINE L1 -1 6333 6309 680 265 78 39 chr20 4454807 4454878 -67699004 - L1ME1 LINE L1 -15 6151 6084 414 0 0 0 chr20 4454878 4454924 -67698958 + (CA)n Simple_repeat Simple_repeat 2 47 0 680 265 78 39 chr20 4454924 4455044 -67698838 - L1ME1 LINE L1 -82 6084 5970 2087 123 0 10 chr20 4455044 4455353 -67698529 - AluSx SINE Alu -6 306 1 1473 121 6 118 chr20 4455359 4455537 -67698345 - AluSc SINE Alu 0 309 187 2094 108 0 3 chr20 4455537 4455832 -67698050 - AluSg SINE Alu -16 294 1 1473 121 6 118 chr20 4455832 4456001 -67697881 - AluSc SINE Alu -122 187 1 680 265 78 39 chr20 4456001 4456133 -67697749 - L1ME1 LINE L1 -200 5966 5807 263 203 105 105 chr20 4456153 4456204 -67697678 - L1MD2 LINE L1 -137 6222 6172 1439 186 47 10 chr20 4456204 4456505 -67697377 + AluJo SINE Alu 1 312 0 263 203 105 105 chr20 4456505 4456586 -67697296 - L1MD2 LINE L1 -186 6173 6090 2355 47 14 3 chr20 4457256 4457552 -67696330 - AluY SINE Alu -12 299 1 2162 91 3 3 chr20 4457623 4457921 -67695961 - AluSx SINE Alu -14 298 1 1414 149 45 128 chr20 4457975 4458048 -67695834 - MER47A DNA MER2_type -1957 366 289 1752 171 10 0 chr20 4458048 4458346 -67695536 + AluJb SINE Alu 1 301 -11 1414 149 45 128 chr20 4458346 4458669 -67695213 - MER47A DNA MER2_type -2034 289 3 2031 118 7 0 chr20 4458711 4459000 -67694882 - AluSc SINE Alu -18 291 1 1920 141 20 3 chr20 4459005 4459304 -67694578 - AluSx SINE Alu -8 304 1 2048 96 44 0 chr20 4460992 4461285 -67692597 - AluSp SINE Alu -7 306 1 905 105 0 0 chr20 4461312 4461436 -67692446 - AluSq/x SINE Alu -189 124 1 300 265 68 77 chr20 4461441 4461498 -67692384 - L1MC4a LINE L1 -1927 5881 5825 2121 100 0 13 chr20 4461498 4461797 -67692085 - AluSg SINE Alu -15 295 1 300 265 68 77 chr20 4461797 4461856 -67692026 - L1MC4a LINE L1 -1983 5825 5766 222 62 0 0 chr20 4462201 4462233 -67691649 + (T)n Simple_repeat Simple_repeat 1 32 0 2227 95 0 3 chr20 4463208 4463504 -67690378 + AluSg SINE Alu 1 295 -15 2146 96 7 0 chr20 4463515 4463808 -67690074 + AluSp SINE Alu 1 295 -18 1918 112 67 0 chr20 4464575 4464860 -67689022 + AluSg SINE Alu 1 304 -6 3828 187 88 60 chr20 4464887 4465254 -67688628 - L1MB7 LINE L1 0 6184 5829 1951 98 35 3 chr20 4465254 4465540 -67688342 - AluSp SINE Alu -18 295 1 3828 187 88 60 chr20 4465540 4465696 -67688186 - L1MB7 LINE L1 -355 5829 5679 2238 84 0 3 chr20 4465696 4465994 -67687888 - AluY SINE Alu -14 297 1 3828 187 88 60 chr20 4465994 4466225 -67687657 - L1MB7 LINE L1 -505 5679 5456 1305 186 61 7 chr20 4466225 4466504 -67687378 - AluJo SINE Alu -18 294 1 1730 147 3 36 chr20 4466509 4466815 -67687067 - AluSx SINE Alu -16 296 1 3828 187 88 60 chr20 4466815 4467201 -67686681 - L1MB7 LINE L1 -731 5453 5079 2391 64 3 0 chr20 4467201 4467498 -67686384 - AluSc SINE Alu -8 301 4 3828 187 88 60 chr20 4467498 4468175 -67685707 - L1MB7 LINE L1 -1105 5079 4308 22 35 0 0 chr20 4469555 4469584 -67684298 + AT_rich Low_complexity Low_complexity 1 29 0 4769 187 139 107 chr20 4469710 4469962 -67683920 + L1MDa LINE L1 285 527 -6013 1576 81 0 5 chr20 4469962 4470171 -67683711 - AluSc SINE Alu -14 295 88 4769 187 139 107 chr20 4470171 4470953 -67682929 + L1MDa LINE L1 527 1282 -5258 1352 112 0 0 chr20 4470953 4471140 -67682742 + AluSq SINE Alu 1 187 -126 4769 187 139 107 chr20 4471140 4472807 -67681075 + L1MDa LINE L1 1282 3349 -3191 2062 118 3 0 chr20 4472807 4473096 -67680786 + AluSx SINE Alu 1 290 -22 244 325 148 57 chr20 4473141 4473910 -67679972 - L2 LINE L2 -1309 2005 1167 1636 157 57 23 chr20 4474260 4474427 -67679455 - AluJb SINE Alu -2 310 127 2214 94 7 16 chr20 4474427 4474735 -67679147 - AluSx SINE Alu -7 305 1 1636 157 57 23 chr20 4474735 4474867 -67679015 - AluJb SINE Alu -185 127 1 769 209 62 74 chr20 4474995 4475430 -67678452 + L1MDa LINE L1 3385 3814 -2726 394 257 27 14 chr20 4475494 4475639 -67678243 + L1MDa LINE L1 4420 4560 -1980 2795 205 38 55 chr20 4475822 4476475 -67677407 - L1MDa LINE L1 -5883 657 16 391 331 77 14 chr20 4476933 4477220 -67676662 - L2 LINE L2 -666 2648 2344 531 233 8 8 chr20 4477647 4477767 -67676115 + L2 LINE L2 3193 3312 -1 2580 27 0 3 chr20 4478538 4478839 -67675043 - AluY SINE Alu -11 300 1 1341 199 112 38 chr20 4479452 4479819 -67674063 - MSTD LTR MaLR -2 394 1 2241 113 30 27 chr20 4479854 4480190 -67673692 - MER1B DNA MER1_type 0 337 1 2221 177 18 111 chr20 4480254 4480369 -67673513 + MER44D DNA MER2_type 1 125 -2362 2204 116 3 0 chr20 4480369 4480679 -67673203 + AluSx SINE Alu 1 311 -1 2221 177 18 111 chr20 4480679 4481166 -67672716 + MER44D DNA MER2_type 125 602 -3 201 74 0 0 chr20 4481954 4481981 -67671901 + (TA)n Simple_repeat Simple_repeat 1 27 0 230 192 19 0 chr20 4482000 4482052 -67671830 + LTR66 LTR ERVL 389 441 -169 337 190 0 130 chr20 4482075 4482175 -67671707 - L1MC4 LINE L1 -1342 6700 6614 * 430 267 0 0 chr20 4482171 4482261 -67671621 + L1MC4 LINE L1 6614 6703 -1339 425 221 28 0 chr20 4482265 4482371 -67671511 + L1MC4 LINE L1 1995 6983 -1339 386 311 0 0 chr20 4482291 4482381 -67671501 - L1MC4 LINE L1 -1339 6703 6614 * 308 196 0 0 chr20 4482372 4482423 -67671459 + L1MC4 LINE L1 6933 6983 -1339 * 418 203 32 32 chr20 4482426 4482549 -67671333 - MLT1H LTR MaLR 0 549 427 679 286 6 17 chr20 4482563 4482738 -67671144 - MLT1H LTR MaLR -271 278 106 1039 156 0 0 chr20 4482746 4482913 -67670969 - FRAM SINE Alu -9 167 1 474 172 149 0 chr20 4482918 4483005 -67670877 - MLT1H LTR MaLR -449 100 1 242 303 191 25 chr20 4483009 4483286 -67670596 + L2 LINE L2 2430 2752 -562 325 288 45 18 chr20 4483532 4483643 -67670239 - LTR67 LTR ERVL -288 269 156 385 248 205 24 chr20 4484209 4484463 -67669419 + LTR16A1 LTR ERVL 1 300 -157 1211 129 67 0 chr20 4484851 4485045 -67668837 - AluJo SINE Alu -10 302 96 194 335 181 11 chr20 4485360 4485542 -67668340 + L2 LINE L2 2599 2811 -503 397 136 0 0 chr20 4485542 4485601 -67668281 + AluS SINE Alu 1 59 -249 1428 92 0 5 chr20 4485601 4485796 -67668086 - AluSx SINE Alu -118 194 1 1424 238 24 84 chr20 4485796 4486245 -67667637 + MLT2B1 LTR ERVL 15 511 -43 189 107 0 0 chr20 4486245 4486273 -67667609 + (TATATG)n Simple_repeat Simple_repeat 2 29 0 1424 238 24 84 chr20 4486273 4486308 -67667574 + MLT2B1 LTR ERVL 511 547 -7 1244 182 81 36 chr20 4486340 4486454 -67667428 - MER33 DNA MER1_type -2262 323 216 2153 103 3 0 chr20 4486454 4486746 -67667136 + AluSp SINE Alu 1 293 -20 1244 182 81 36 chr20 4486746 4486939 -67666943 - MER33 DNA MER1_type -2369 216 2 2081 115 10 0 chr20 4486969 4487265 -67666617 + AluSx SINE Alu 1 299 -13 879 213 66 5 chr20 4487514 4487711 -67666171 + L1MC/D LINE L1 47 255 -6141 262 286 13 0 chr20 4487719 4487796 -67666086 + L1MC/D LINE L1 656 733 -5663 2279 274 33 55 chr20 4487797 4488698 -67665184 + L1MC/D LINE L1 808 1681 -4715 1946 128 0 3 chr20 4488698 4489009 -67664873 + AluSg SINE Alu 1 310 0 2279 274 33 55 chr20 4489009 4489254 -67664628 + L1MC/D LINE L1 1681 1930 -4466 4759 208 49 66 chr20 4489289 4489344 -67664538 + L1MC/D LINE L1 3662 3716 -2499 1624 183 0 7 chr20 4489344 4489666 -67664216 - AluJb SINE Alu 0 320 1 4759 208 49 66 chr20 4489666 4489815 -67664067 + L1MC/D LINE L1 3716 3866 -2349 1800 55 0 0 chr20 4489815 4490032 -67663850 + AluY SINE Alu 1 217 -94 4759 208 49 66 chr20 4490032 4490603 -67663279 + L1MC/D LINE L1 3866 4445 -1770 387 0 0 0 chr20 4490603 4490646 -67663236 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 2172 82 0 0 chr20 4490648 4490927 -67662955 - AluY SINE Alu -31 280 2 4759 208 49 66 chr20 4490927 4491652 -67662230 + L1MC/D LINE L1 4446 5143 -1072 1432 134 0 0 chr20 4491693 4491902 -67661980 - AluSq SINE Alu -104 209 1 702 209 65 44 chr20 4491904 4492199 -67661683 + L1MC/D LINE L1 5230 5526 -748 2382 73 0 0 chr20 4492205 4492507 -67661375 - AluSx SINE Alu -10 302 1 1931 183 38 60 chr20 4492554 4493023 -67660859 - MLT1C LTR MaLR -8 459 1 486 226 41 81 chr20 4493025 4493282 -67660600 + L1MC5 LINE L1 7238 7493 -519 743 182 38 44 chr20 4493314 4493473 -67660409 + FAM SINE Alu 1 158 -17 335 127 51 136 chr20 4493538 4493632 -67660250 - MER33 DNA MER1_type -2261 363 279 2297 92 3 9 chr20 4493632 4493947 -67659935 + AluSp SINE Alu 1 313 0 335 127 51 136 chr20 4493947 4493970 -67659912 - MER33 DNA MER1_type -2345 279 256 28 29 0 0 chr20 4493976 4494011 -67659871 + AT_rich Low_complexity Low_complexity 1 35 0 2037 217 133 16 chr20 4494058 4494556 -67659326 - MLT1E2 LTR MaLR -64 562 7 831 229 0 10 chr20 4494560 4494765 -67659117 - MER33 DNA MER1_type -121 203 1 371 301 75 49 chr20 4494765 4494991 -67658891 + L1MC4 LINE L1 7604 7835 -207 1659 219 30 30 chr20 4494991 4495398 -67658484 - LTR52 LTR ERVL -2 419 13 2232 89 3 0 chr20 4495401 4495704 -67658178 + AluSp SINE Alu 1 304 -9 873 217 6 0 chr20 4495724 4495881 -67658001 - LTR52-int LTR ERVL -1 3555 3398 554 220 28 44 chr20 4495891 4496073 -67657809 + L1M4 LINE L1 5150 5328 -818 600 191 14 7 chr20 4496079 4496220 -67657662 + L1 LINE L1 5190 5331 -815 2281 86 10 0 chr20 4496220 4496521 -67657361 + AluSx SINE Alu 1 304 -8 6017 233 42 44 chr20 4496524 4497138 -67656744 - LTR52-int LTR ERVL -1895 1661 1047 2104 108 0 0 chr20 4497138 4497433 -67656449 + AluSx SINE Alu 1 295 -17 6017 233 42 44 chr20 4497433 4498481 -67655401 - LTR52-int LTR ERVL -2509 1047 3 2133 108 0 0 chr20 4498584 4498880 -67655002 + AluSx SINE Alu 1 296 -16 1794 143 7 23 chr20 4499152 4499460 -67654422 + AluJo SINE Alu 1 303 -9 1989 116 0 0 chr20 4499482 4499758 -67654124 + AluSg SINE Alu 1 276 -34 198 0 0 0 chr20 4499761 4499783 -67654099 + (CAAAA)n Simple_repeat Simple_repeat 1 22 0 600 273 42 0 chr20 4499783 4499948 -67653934 + LTR52-int LTR ERVL 295 466 -3090 495 216 30 82 chr20 4499981 4500036 -67653846 + MIR SINE MIR 92 148 -114 2352 139 21 3 chr20 4500036 4500418 -67653464 - MLT1B LTR MaLR 0 390 2 495 216 30 82 chr20 4500418 4500496 -67653386 + MIR SINE MIR 148 218 -44 834 181 7 0 chr20 4500534 4500683 -67653199 - FRAM SINE Alu -26 150 1 231 146 0 0 chr20 4500693 4500734 -67653148 + (TC)n Simple_repeat Simple_repeat 2 42 0 1988 102 18 0 chr20 4500734 4501008 -67652874 - AluSx SINE Alu -32 280 2 540 158 338 0 chr20 4501276 4501409 -67652473 + MER5A DNA MER1_type 3 180 -9 229 279 79 50 chr20 4501508 4501648 -67652234 + L2 LINE L2 2614 2757 -557 525 335 56 19 chr20 4501727 4501942 -67651940 + MIR SINE MIR 24 246 -16 281 221 65 0 chr20 4502060 4502137 -67651745 + LTR16C LTR ERVL 71 152 -339 301 176 0 0 chr20 4502145 4502196 -67651686 + MIR SINE MIR 132 182 -80 639 210 123 0 chr20 4502884 4503022 -67650860 - MER45A DNA AcHobo -23 155 1 1132 204 133 31 chr20 4503474 4503924 -67649958 + LTR33 LTR ERVL 24 519 -2 265 381 8 0 chr20 4504233 4504351 -67649531 + (CAGG)n Simple_repeat Simple_repeat 1 119 0 484 292 119 0 chr20 4504604 4504789 -67649093 + MLT1K LTR MaLR 376 582 -6 269 308 33 0 chr20 4504889 4504980 -67648902 + MIR SINE MIR 39 132 -76 563 226 178 51 chr20 4505250 4505542 -67648340 + MLT1K LTR MaLR 212 540 -48 985 195 5 5 chr20 4505694 4505879 -67648003 + MER5A DNA MER1_type 3 187 -2 242 212 44 97 chr20 4505928 4506041 -67647841 + LTR16A1 LTR ERVL 20 126 -331 366 240 4 0 chr20 4506648 4506899 -67646983 + (TG)n Simple_repeat Simple_repeat 1 252 0 444 219 32 45 chr20 4507236 4507391 -67646491 + L1ME4a LINE L1 5967 6119 -2 1560 241 138 95 chr20 4507566 4507755 -67646127 - L1MC4 LINE L1 -63 7979 7800 1975 129 0 3 chr20 4507755 4508049 -67645833 - AluSx SINE Alu -19 293 1 1560 241 138 95 chr20 4508049 4509463 -67644419 - L1MC4 LINE L1 -242 7800 6448 787 143 0 30 chr20 4509463 4509596 -67644286 - FLAM_C SINE Alu -4 129 1 1560 241 138 95 chr20 4509596 4510039 -67643843 - L1MC4 LINE L1 -1594 6448 6025 2465 156 21 12 chr20 4510039 4510461 -67643421 - MSTB LTR MaLR 0 426 1 1560 241 138 95 chr20 4510461 4510612 -67643270 - L1MC4 LINE L1 -2017 6025 5593 483 63 0 0 chr20 4511177 4511240 -67642642 + (TTC)n Simple_repeat Simple_repeat 1 63 0 1905 136 33 0 chr20 4511243 4511721 -67642161 - AluSq SINE Alu 0 488 1 645 318 161 35 chr20 4511771 4511887 -67641995 - L2 LINE L2 -605 2709 2609 2005 131 0 0 chr20 4511887 4512192 -67641690 - AluSq SINE Alu -4 309 5 645 318 161 35 chr20 4512192 4512794 -67641088 - L2 LINE L2 -705 2609 1853 2153 68 0 24 chr20 4512794 4513087 -67640795 + AluSc SINE Alu 1 286 -23 645 318 161 35 chr20 4513087 4513269 -67640613 - L2 LINE L2 -1461 1853 1695 1995 125 3 0 chr20 4513281 4513577 -67640305 - AluSx SINE Alu -15 297 1 21 0 0 0 chr20 4513837 4513858 -67640024 + AT_rich Low_complexity Low_complexity 1 21 0 1249 96 0 11 chr20 4514668 4514846 -67639036 + FRAM SINE Alu 1 176 0 769 167 48 0 chr20 4514860 4515014 -67638868 + FLAM_C SINE Alu 2 161 0 2195 92 3 3 chr20 4515190 4515484 -67638398 + AluSc SINE Alu 1 294 -15 1564 151 0 89 chr20 4516126 4516450 -67637432 + AluJo SINE Alu 1 295 -17 429 276 58 1 chr20 4516637 4516754 -67637128 + MLT1J LTR MaLR 59 218 -286 836 169 0 0 chr20 4517006 4517148 -67636734 - FLAM_C SINE Alu -1 142 1 1889 123 0 36 chr20 4517197 4517506 -67636376 - AluSx SINE Alu -1 311 14 695 100 9 0 chr20 4517564 4517674 -67636208 + (TTCC)n Simple_repeat Simple_repeat 4 114 0 340 137 0 0 chr20 4517674 4517725 -67636157 + (TTTC)n Simple_repeat Simple_repeat 3 53 0 1562 179 11 0 chr20 4517725 4517998 -67635884 - AluJb SINE Alu -36 276 1 1761 154 3 7 chr20 4518001 4518329 -67635553 - AluSx SINE Alu 0 327 1 1926 104 4 0 chr20 4518340 4518608 -67635274 - AluSc SINE Alu -11 298 30 1050 311 58 22 chr20 4518681 4519444 -67634438 - L1M4 LINE L1 -2007 4139 3350 1667 142 46 0 chr20 4519552 4519834 -67634048 - AluSx SINE Alu -17 295 1 314 333 6 54 chr20 4519835 4520003 -67633879 - L1M4 LINE L1 -2984 3162 3003 1439 249 51 30 chr20 4520019 4520452 -67633430 - LTR16A1 LTR ERVL -15 442 1 574 130 130 26 chr20 4520482 4520597 -67633285 + FLAM_C SINE Alu 10 136 -7 244 294 51 65 chr20 4520647 4520812 -67633070 - L1M4 LINE L1 -3184 2962 2796 2154 92 0 0 chr20 4520812 4521129 -67632753 - AluY SINE Alu 0 317 1 244 294 51 65 chr20 4521129 4521456 -67632426 - L1M4 LINE L1 -3350 2796 2476 453 268 61 37 chr20 4521515 4521761 -67632121 + L1MEc LINE L1 1532 1783 -4613 2241 101 7 0 chr20 4521819 4522126 -67631756 - AluSp SINE Alu -4 309 1 2234 193 56 39 chr20 4522380 4522508 -67631374 + L1ME1 LINE L1 5260 5384 -782 1972 135 0 14 chr20 4522508 4522805 -67631077 + AluSx SINE Alu 1 293 -19 2234 193 56 39 chr20 4522805 4522935 -67630947 + L1ME1 LINE L1 5384 5510 -656 1061 174 12 0 chr20 4522935 4523107 -67630775 + FAM SINE Alu 1 174 -1 2234 193 56 39 chr20 4523107 4523588 -67630294 + L1ME1 LINE L1 5510 6165 -1 26 0 0 0 chr20 4523921 4523947 -67629935 + AT_rich Low_complexity Low_complexity 1 26 0 2003 145 61 112 chr20 4524049 4524539 -67629343 + L1MC2 LINE L1 5871 6335 -9 550 148 59 0 chr20 4524543 4524644 -67629238 + HsTC2 DNA Tc2 1610 1716 -182 1813 166 3 3 chr20 4524683 4524985 -67628897 - AluJb SINE Alu -10 302 1 226 163 0 0 chr20 4525007 4525050 -67628832 + HsTC2 DNA Tc2 1856 1898 0 389 145 66 163 chr20 4525050 4525219 -67628663 + HsTC2 DNA Tc2 1715 1851 -47 2134 99 0 3 chr20 4525219 4525511 -67628371 + AluSg SINE Alu 6 296 -14 389 145 66 163 chr20 4525511 4525556 -67628326 + HsTC2 DNA Tc2 1851 1899 1 955 198 0 0 chr20 4525686 4525863 -67628019 - FRAM SINE Alu -1 175 1 364 221 55 47 chr20 4525865 4525992 -67627890 + L1ME4a LINE L1 5966 6093 -28 854 118 47 16 chr20 4526025 4526152 -67627730 + FLAM_C SINE Alu 1 131 -2 1380 204 28 11 chr20 4526282 4526533 -67627349 + L1MB4 LINE L1 5883 6141 -39 1346 138 142 4 chr20 4526533 4526640 -67627242 + AluJo SINE Alu 1 92 -220 273 57 0 0 chr20 4526640 4526675 -67627207 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 1346 138 142 4 chr20 4526675 4526827 -67627055 + AluJo SINE Alu 92 296 -16 1380 204 28 11 chr20 4526827 4526860 -67627022 + L1MB4 LINE L1 6141 6172 -8 654 302 298 1 chr20 4526872 4527564 -67626318 - L2 LINE L2 -932 2382 1486 932 171 74 0 chr20 4527673 4527849 -67626033 + MER5A DNA MER1_type 1 189 0 185 211 19 0 chr20 4529047 4529099 -67624783 + CT-rich Low_complexity Low_complexity 2 54 0 877 134 8 0 chr20 4529897 4530031 -67623851 + AluJo SINE Alu 1 135 -177 2109 123 0 7 chr20 4530031 4530339 -67623543 + AluSp SINE Alu 1 306 -7 1965 126 0 46 chr20 4530370 4530695 -67623187 + AluSq SINE Alu 1 310 -3 357 189 0 14 chr20 4531010 4531084 -67622798 + MER53 DNA DNA 105 177 -12 7729 32 7 17 chr20 4531090 4532234 -67621648 - L1PA5 LINE L1 0 6154 5016 2820 13 0 0 chr20 4532234 4532551 -67621331 - AluYb8 SINE Alu -1 317 1 7729 32 7 17 chr20 4532551 4532749 -67621133 - L1PA5 LINE L1 -1138 5016 4818 2089 90 0 0 chr20 4532972 4533239 -67620643 + AluSq SINE Alu 1 267 -46 26 0 0 0 chr20 4533251 4533277 -67620605 + AT_rich Low_complexity Low_complexity 1 26 0 1649 102 0 8 chr20 4533295 4533531 -67620351 + AluSg/x SINE Alu 74 307 -5 302 214 258 0 chr20 4533531 4533610 -67620272 + MER5A DNA MER1_type 61 167 -22 393 316 58 36 chr20 4534355 4534579 -67619303 - MLT1H LTR MaLR -123 286 63 635 275 81 6 chr20 4534721 4535104 -67618778 + MLT1J2 LTR MaLR 3 450 0 305 280 137 30 chr20 4535282 4535450 -67618432 - MIR SINE MIR 0 262 77 456 179 60 0 chr20 4535776 4535860 -67618022 + MLT1C LTR MaLR 2 90 -377 311 244 16 57 chr20 4535874 4535997 -67617885 + (TATATG)n Simple_repeat Simple_repeat 3 120 0 261 219 16 0 chr20 4536019 4536035 -67617847 + MER39 LTR ERV1 6 20 -911 279 0 0 0 chr20 4536035 4536066 -67617816 + (CA)n Simple_repeat Simple_repeat 2 32 0 261 219 16 0 chr20 4536066 4536113 -67617769 + MER39 LTR ERV1 20 70 -861 1709 170 28 96 chr20 4536217 4536816 -67617066 + MER39 LTR ERV1 71 565 -201 1721 196 45 45 chr20 4536877 4536899 -67616983 + MER21B LTR ERV1 449 470 -393 1947 120 21 0 chr20 4536899 4537190 -67616692 - AluSx SINE Alu -15 297 1 1721 196 45 45 chr20 4537190 4537449 -67616433 + MER21B LTR ERV1 470 734 -129 2114 106 3 0 chr20 4537449 4537763 -67616119 + AluSp SINE Alu 1 315 0 1721 196 45 45 chr20 4537763 4537883 -67615999 + MER21B LTR ERV1 733 852 -11 1301 170 92 60 chr20 4537892 4537985 -67615897 + MLT1C LTR MaLR 86 175 -292 1978 103 33 0 chr20 4537985 4538288 -67615594 + AluSg SINE Alu 1 312 0 2140 79 4 0 chr20 4538297 4538608 -67615274 + AluY SINE Alu 1 312 0 1301 170 92 60 chr20 4538608 4538872 -67615010 + MLT1C LTR MaLR 182 467 0 880 242 82 35 chr20 4538875 4539222 -67614660 + MLT1H LTR MaLR 80 498 -57 1787 87 121 8 chr20 4539222 4539487 -67614395 + AluSx SINE Alu 1 295 -17 880 242 82 35 chr20 4539487 4539547 -67614335 + MLT1H LTR MaLR 498 554 -1 22 0 0 0 chr20 4539685 4539707 -67614175 + AT_rich Low_complexity Low_complexity 1 22 0 564 228 21 35 chr20 4539763 4539908 -67613974 - LTR67 LTR ERVL -379 178 36 286 325 98 8 chr20 4540078 4540201 -67613681 + MLT1K LTR MaLR 138 271 -317 361 212 185 20 chr20 4540442 4540456 -67613426 - MIR SINE MIR -56 206 196 2301 86 3 0 chr20 4540456 4540758 -67613124 - AluSx SINE Alu -9 303 1 361 212 185 20 chr20 4540758 4540894 -67612988 - MIR SINE MIR -66 196 31 262 194 19 68 chr20 4541366 4541469 -67612413 + (CGGGG)n Simple_repeat Simple_repeat 5 102 0 21 95 0 0 chr20 4541736 4541799 -67612083 + GC_rich Low_complexity Low_complexity 1 63 0 23 0 0 0 chr20 4541905 4541928 -67611954 + GC_rich Low_complexity Low_complexity 1 23 0 1137 326 126 35 chr20 4542706 4543469 -67610413 + L2 LINE L2 1603 2295 -1018 2370 88 0 0 chr20 4543469 4543776 -67610106 - AluSq SINE Alu -6 307 1 1137 326 126 35 chr20 4543776 4544555 -67609327 + L2 LINE L2 2295 3297 -16 607 236 188 0 chr20 4545344 4545509 -67608373 - MIR SINE MIR -26 236 41 258 286 11 55 chr20 4545528 4545619 -67608263 - MIR SINE MIR -169 93 7 511 221 105 70 chr20 4546905 4547011 -67606871 - MER5A DNA MER1_type -1 188 71 1699 130 71 22 chr20 4547011 4547307 -67606575 - AluSx SINE Alu 0 309 1 511 221 105 70 chr20 4547307 4547371 -67606511 - MER5A DNA MER1_type -118 71 11 343 232 45 18 chr20 4548053 4548165 -67605717 + MIR SINE MIR 34 148 -60 25 31 0 0 chr20 4548249 4548281 -67605601 + AT_rich Low_complexity Low_complexity 1 32 0 325 200 71 0 chr20 4548758 4548843 -67605039 - MER103 DNA DNA -46 120 30 203 61 0 30 chr20 4549067 4549100 -67604782 + MIR SINE MIR 109 140 -68 2165 114 0 0 chr20 4549388 4549687 -67604195 - AluSx SINE Alu -13 299 1 361 217 33 11 chr20 4549790 4549882 -67604000 + MIR SINE MIR 84 177 -85 188 222 22 0 chr20 4550255 4550300 -67603582 - L2 LINE L2 -557 2757 2712 2441 44 0 0 chr20 4550541 4550839 -67603043 - AluY SINE Alu -8 303 6 2145 91 42 0 chr20 4551770 4552056 -67601826 - AluSq SINE Alu -15 298 1 234 271 0 0 chr20 4552134 4552193 -67601689 + MIR SINE MIR 95 153 -109 393 282 113 15 chr20 4553038 4553263 -67600619 + MIR SINE MIR 11 258 -4 333 155 42 0 chr20 4554409 4554480 -67599402 + L2 LINE L2 3239 3312 -1 191 200 36 0 chr20 4555067 4555122 -67598760 + L2 LINE L2 2924 2980 -292 181 263 0 0 chr20 4555390 4555428 -67598454 - MIR SINE MIR -102 160 123 436 233 68 48 chr20 4555807 4555953 -67597929 - MER5B DNA MER1_type -8 170 22 2679 197 48 10 chr20 4556143 4556661 -67597221 - MLT1F LTR MaLR -4 538 1 343 203 203 72 chr20 4557032 4557170 -67596712 - MIR SINE MIR -82 180 25 1510 190 33 53 chr20 4557538 4557691 -67596191 - AluJo SINE Alu -8 294 148 2407 72 0 3 chr20 4557691 4557998 -67595884 - AluSg SINE Alu -4 306 1 1510 190 33 53 chr20 4557998 4558144 -67595738 - AluJo SINE Alu -154 148 1 311 198 74 12 chr20 4558351 4558432 -67595450 - MIR SINE MIR -112 150 65 916 188 0 0 chr20 4558999 4559153 -67594729 - AluJ SINE Alu -19 293 140 244 262 65 19 chr20 4560238 4560345 -67593537 - MIR3 SINE MIR -82 126 15 2344 87 0 0 chr20 4561191 4561501 -67592381 - AluSx SINE Alu -2 310 1 925 185 0 0 chr20 4561528 4561772 -67592110 - AluJo SINE Alu 0 364 121 795 129 16 8 chr20 4561812 4561936 -67591946 - AluJo SINE Alu -177 135 11 186 189 81 0 chr20 4562665 4562702 -67591180 + L2 LINE L2 3225 3264 -8 515 188 0 0 chr20 4563108 4563193 -67590689 - AluSg/x SINE Alu -9 301 217 180 0 0 0 chr20 4563921 4563941 -67589941 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 1563 268 44 24 chr20 4565744 4566285 -67587597 - L1ME3 LINE L1 -21 6141 5590 199 197 0 30 chr20 4567414 4567480 -67586402 + CT-rich Low_complexity Low_complexity 4 67 0 1859 115 0 4 chr20 4568664 4568924 -67584958 - AluSx SINE Alu -11 301 43 447 257 0 18 chr20 4569026 4569139 -67584743 - MLT1H LTR MaLR -438 111 1 28 86 0 0 chr20 4570403 4570473 -67583409 + AT_rich Low_complexity Low_complexity 1 70 0 840 213 66 5 chr20 4570542 4570679 -67583203 + MER3 DNA MER1_type 1 155 -54 2156 106 10 0 chr20 4570679 4570981 -67582901 - AluSg SINE Alu -5 305 1 840 213 66 5 chr20 4570981 4571040 -67582842 + MER3 DNA MER1_type 155 209 0 405 215 58 0 chr20 4571050 4571184 -67582698 - L1M4 LINE L1 -1979 4167 4020 2323 103 3 0 chr20 4571315 4571627 -67582255 - AluSp SINE Alu 0 313 1 553 310 92 50 chr20 4571860 4572241 -67581641 - MARNA DNA Mariner -122 464 68 778 234 49 0 chr20 4572285 4572469 -67581413 + MIR SINE MIR 21 213 -49 270 367 110 4 chr20 4573177 4573414 -67580468 + L2 LINE L2 2715 2976 -338 215 194 235 20 chr20 4573515 4573613 -67580269 + L2 LINE L2 3138 3256 -16 564 176 126 75 chr20 4576545 4576621 -67577261 - MER3 DNA MER1_type 0 209 138 1877 141 3 66 chr20 4576621 4576940 -67576942 - AluJb SINE Alu -13 299 1 564 176 126 75 chr20 4576940 4577062 -67576820 - MER3 DNA MER1_type -71 138 1 843 250 58 43 chr20 4577574 4577850 -67576032 - MLT1J LTR MaLR -199 312 33 443 95 0 0 chr20 4577862 4577925 -67575957 + FRAM/FAM SINE Alu 24 86 -90 287 116 0 0 chr20 4578014 4578057 -67575825 + MER5A DNA MER1_type 33 75 -114 1606 127 5 0 chr20 4578057 4578277 -67575605 + AluSg/x SINE Alu 84 304 -6 21 0 0 0 chr20 4578306 4578327 -67575555 + AT_rich Low_complexity Low_complexity 1 21 0 1606 127 5 0 chr20 4578341 4578561 -67575321 + AluSg/x SINE Alu 84 304 -6 326 237 76 42 chr20 4578610 4578677 -67575205 + MER5A DNA MER1_type 61 135 -54 1792 160 0 20 chr20 4578677 4578970 -67574912 + AluJo SINE Alu 14 300 -12 326 237 76 42 chr20 4578970 4579020 -67574862 + MER5A DNA MER1_type 135 182 -7 307 335 112 61 chr20 4579112 4579488 -67574394 + L2 LINE L2 2870 3264 -8 * 570 245 82 19 chr20 4579485 4579702 -67574180 - MIR SINE MIR 0 262 40 2436 84 3 0 chr20 4580747 4581058 -67572824 - AluSx SINE Alu 0 312 1 927 157 0 0 chr20 4581238 4581372 -67572510 + FRAM SINE Alu 28 161 -15 834 167 0 0 chr20 4581497 4581617 -67572265 + FLAM_C SINE Alu 1 120 -23 332 308 18 18 chr20 4581672 4581841 -67572041 + (CA)n Simple_repeat Simple_repeat 2 170 0 1188 156 35 25 chr20 4582180 4582379 -67571503 - AluJo SINE Alu -28 284 84 250 282 13 0 chr20 4582400 4582478 -67571404 + (CA)n Simple_repeat Simple_repeat 2 80 0 2161 126 7 0 chr20 4582585 4582879 -67571003 - AluSx SINE Alu -16 296 1 229 250 38 0 chr20 4583054 4583134 -67570748 - L1MC4a LINE L1 -1868 5940 5858 2390 103 0 3 chr20 4583136 4583448 -67570434 + AluSq SINE Alu 1 311 -2 221 287 210 7 chr20 4583842 4583985 -67569897 - MIR SINE MIR -10 252 81 1716 248 79 46 chr20 4584087 4584404 -67569478 + L1ME3 LINE L1 5533 5880 -282 1851 168 14 0 chr20 4584404 4584719 -67569163 + AluJb SINE Alu 1 319 0 1716 248 79 46 chr20 4584719 4584968 -67568914 + L1ME3 LINE L1 5880 6119 -43 271 261 57 11 chr20 4586674 4586762 -67567120 + MLT1K LTR MaLR 494 585 -3 998 283 130 41 chr20 4586999 4587828 -67566054 + L2 LINE L2 2336 3311 -2 2460 68 19 3 chr20 4588639 4588947 -67564935 + AluSp SINE Alu 1 313 0 1668 135 8 4 chr20 4589356 4589600 -67564282 + AluSp SINE Alu 1 245 -68 1289 249 63 89 chr20 4589618 4590038 -67563844 - L1ME3A LINE L1 -26 6144 5714 2303 123 0 0 chr20 4590038 4590348 -67563534 + AluSg SINE Alu 1 310 0 1289 249 63 89 chr20 4590348 4590417 -67563465 - L1ME3A LINE L1 -456 5714 5670 2462 97 0 0 chr20 4590417 4590728 -67563154 - AluSx SINE Alu -1 311 1 1289 249 63 89 chr20 4590728 4590807 -67563075 - L1ME3A LINE L1 -500 5670 5590 583 218 177 0 chr20 4591199 4591346 -67562536 + MER5A DNA MER1_type 4 176 -13 474 257 70 23 chr20 4591602 4591707 -67562175 + MER5A DNA MER1_type 4 121 -68 2781 148 4 40 chr20 4591707 4591926 -67561956 - MER66B LTR ERV1 -4 482 257 2622 44 3 0 chr20 4591926 4592223 -67561659 - AluY SINE Alu -13 298 1 2781 148 4 40 chr20 4592223 4592503 -67561379 - MER66B LTR ERV1 -229 257 1 474 257 70 23 chr20 4592503 4592568 -67561314 + MER5A DNA MER1_type 121 182 -7 188 245 102 0 chr20 4592582 4592631 -67561251 - MER5B DNA MER1_type 0 178 125 351 135 58 106 chr20 4592666 4592723 -67561159 - MER5B DNA MER1_type -2 176 125 2236 88 39 20 chr20 4592723 4592860 -67561022 + AluSx SINE Alu 1 134 -178 2278 102 0 13 chr20 4592860 4593165 -67560717 + AluSq SINE Alu 1 301 -12 2236 88 39 20 chr20 4593165 4593333 -67560549 + AluSx SINE Alu 134 312 0 351 135 58 106 chr20 4593333 4593379 -67560503 - MER5B DNA MER1_type -53 125 78 455 323 45 15 chr20 4593438 4593639 -67560243 - ERVL LTR ERVL -3508 2256 2050 1839 125 3 44 chr20 4594019 4594316 -67559566 - AluSx SINE Alu -10 302 18 1795 163 7 17 chr20 4594410 4594710 -67559172 - AluJo SINE Alu -15 297 1 1119 279 70 52 chr20 4594712 4594748 -67559134 - L1ME3A LINE L1 0 6170 6136 3001 127 6 31 chr20 4594748 4594922 -67558960 + MER70A LTR ERVL 1 178 -294 2327 93 7 3 chr20 4594922 4595224 -67558658 + AluSx SINE Alu 3 305 -7 3001 127 6 31 chr20 4595224 4595531 -67558351 + MER70A LTR ERVL 178 470 -2 1119 279 70 52 chr20 4595531 4595882 -67558000 - L1ME3A LINE L1 -34 6136 5793 2343 103 0 6 chr20 4595882 4596193 -67557689 - AluSq SINE Alu -4 309 1 1119 279 70 52 chr20 4596193 4596227 -67557655 - L1ME3A LINE L1 -377 5793 5761 2221 114 0 0 chr20 4596227 4596526 -67557356 - AluSx SINE Alu -6 306 8 1119 279 70 52 chr20 4596526 4596734 -67557148 - L1ME3A LINE L1 -409 5761 5528 520 223 11 0 chr20 4596734 4596828 -67557054 + MER70A LTR ERVL 128 222 -250 314 176 0 0 chr20 4596842 4596893 -67556989 - MER70A LTR ERVL -139 333 283 523 192 0 0 chr20 4596921 4597041 -67556841 - L1M4 LINE L1 -2454 3692 3573 574 101 0 0 chr20 4597044 4597169 -67556713 + AluSp/q SINE Alu 205 329 0 365 238 159 24 chr20 4597169 4597295 -67556587 - L1M4 LINE L1 -2567 3579 3437 628 260 49 4 chr20 4597308 4597554 -67556328 - L1M4 LINE L1 -2932 3214 2958 * 2781 229 23 26 chr20 4597545 4597801 -67556081 - L1M4 LINE L1 -2812 3334 3079 2587 161 23 73 chr20 4597801 4598342 -67555540 - LTR9 LTR ERV1 0 612 107 2334 96 3 0 chr20 4598342 4598635 -67555247 + AluSq SINE Alu 1 294 -19 2587 161 23 73 chr20 4598635 4598737 -67555145 - LTR9 LTR ERV1 -505 107 1 2781 229 23 26 chr20 4598737 4599092 -67554790 - L1M4 LINE L1 -3067 3079 2724 2596 115 74 5 chr20 4599092 4599526 -67554356 + MER4C LTR ERV1 1 464 -1 2781 229 23 26 chr20 4599526 4599754 -67554128 - L1M4 LINE L1 -3422 2724 2497 2759 153 68 10 chr20 4599764 4600013 -67553869 - L1MC3 LINE L1 -8 7777 7544 2707 182 109 78 chr20 4600013 4600321 -67553561 + MER21B LTR ERV1 1 298 -565 1496 201 30 27 chr20 4600321 4600620 -67553262 + AluJo SINE Alu 1 300 -12 2707 182 109 78 chr20 4600620 4600847 -67553035 + MER21B LTR ERV1 298 516 -347 2506 92 0 0 chr20 4600847 4601151 -67552731 + AluSx SINE Alu 1 304 -8 2707 182 109 78 chr20 4601151 4601449 -67552433 + MER21B LTR ERV1 516 861 -2 2759 153 68 10 chr20 4601449 4601546 -67552336 - L1MC3 LINE L1 -241 7544 7454 2375 103 3 7 chr20 4601546 4601856 -67552026 - AluSq SINE Alu 0 313 5 2759 153 68 10 chr20 4601856 4602083 -67551799 - L1MC3 LINE L1 -331 7454 7170 1634 136 0 0 chr20 4602111 4602332 -67551550 - AluSx SINE Alu -91 221 1 263 305 12 0 chr20 4602544 4602626 -67551256 - L1ME LINE L1 -542 5579 5497 2370 84 0 3 chr20 4602659 4602958 -67550924 + AluSg SINE Alu 1 298 -12 397 233 78 3 chr20 4603319 4603434 -67550448 + MLT1I LTR MaLR 65 171 -238 721 121 60 0 chr20 4603984 4604100 -67549782 + FLAM_A SINE Alu 1 123 -10 21 0 0 0 chr20 4604107 4604128 -67549754 + AT_rich Low_complexity Low_complexity 1 21 0 2017 161 3 0 chr20 4604282 4604592 -67549290 + AluJo SINE Alu 1 311 -1 2336 98 16 7 chr20 4605015 4605321 -67548561 + AluSp SINE Alu 1 309 -4 346 239 8 62 chr20 4605413 4605543 -67548339 + L2 LINE L2 2523 2645 -669 * 841 267 160 11 chr20 4605530 4605904 -67547978 + L2 LINE L2 2884 3313 0 2350 97 0 6 chr20 4606724 4607035 -67546847 - AluSc SINE Alu 0 309 1 2150 114 19 10 chr20 4607062 4607370 -67546512 + AluSx SINE Alu 1 311 -1 284 278 14 0 chr20 4607526 4607598 -67546284 + MLT1L LTR MaLR 1 73 -542 498 129 24 0 chr20 4607626 4607711 -67546171 - MER58 DNA MER1_type -3 2417 2331 315 153 42 14 chr20 4607716 4607788 -67546094 - MER58 DNA MER1_type -188 153 80 2448 85 0 28 chr20 4607792 4607926 -67545956 + AluSx SINE Alu 1 137 -175 2507 68 0 10 chr20 4607926 4608236 -67545646 + AluY SINE Alu 1 307 -4 2448 85 0 28 chr20 4608236 4608418 -67545464 + AluSx SINE Alu 137 308 -4 201 74 0 0 chr20 4609293 4609320 -67544562 + (A)n Simple_repeat Simple_repeat 1 27 0 4032 128 2 11 chr20 4611320 4611835 -67542047 + MER41B LTR ERV1 1 510 -125 2361 87 37 3 chr20 4611835 4612133 -67541749 - AluSq SINE Alu -5 308 1 4032 128 2 11 chr20 4612133 4612258 -67541624 + MER41B LTR ERV1 510 635 0 680 155 43 183 chr20 4614883 4615089 -67538793 + Charlie4a DNA MER1_type 2 141 -1820 2393 177 101 18 chr20 4615089 4615604 -67538278 + LTR64 LTR ERVK 1 558 0 680 155 43 183 chr20 4615604 4615746 -67538136 + Charlie4a DNA MER1_type 141 301 -207 396 157 56 111 chr20 4615752 4615860 -67538022 + L1M4 LINE L1 4829 4930 -1216 838 237 23 0 chr20 4615860 4616075 -67537807 + Charlie4a DNA MER1_type 286 505 -3 2232 121 12 3 chr20 4616229 4616575 -67537307 + MER47A DNA MER2_type 2 350 -16 2480 79 3 10 chr20 4617638 4617943 -67535939 - AluSg SINE Alu -7 303 1 1865 154 40 3 chr20 4618059 4618358 -67535524 - AluSx SINE Alu 0 312 3 1191 245 155 19 chr20 4618966 4619398 -67534484 - LTR16C LTR ERVL 0 491 1 192 167 146 0 chr20 4619877 4619925 -67533957 + L2 LINE L2 2920 2974 -298 216 317 80 38 chr20 4620074 4620336 -67533546 + L2 LINE L2 2392 2664 -650 488 144 0 11 chr20 4620337 4620427 -67533455 + (TTCC)n Simple_repeat Simple_repeat 3 91 0 963 54 0 0 chr20 4620440 4620551 -67533331 - AluSq/x SINE Alu -202 111 1 341 276 22 67 chr20 4620552 4620686 -67533196 + L2 LINE L2 2615 2742 -572 184 306 0 0 chr20 4621136 4621185 -67532697 - L2 LINE L2 -14 3299 3251 231 340 57 0 chr20 4621242 4621348 -67532534 + L2 LINE L2 1314 1425 -1889 757 205 227 4 chr20 4621678 4621951 -67531931 + L2 LINE L2 2015 2348 -966 * 964 247 37 72 chr20 4621944 4622345 -67531537 - L2 LINE L2 -96 3217 2831 749 283 148 24 chr20 4622343 4623031 -67530851 + L2 LINE L2 2542 3309 -4 * 516 86 21 21 chr20 4623637 4623730 -67530152 + (TTTC)n Simple_repeat Simple_repeat 2 94 0 1669 173 73 0 chr20 4623742 4623908 -67529974 - AluJo SINE Alu -2 310 157 276 30 0 0 chr20 4623908 4623941 -67529941 + (TTA)n Simple_repeat Simple_repeat 2 34 0 1669 173 73 0 chr20 4623941 4624063 -67529819 - AluJo SINE Alu -155 157 1 213 229 48 60 chr20 4624104 4624187 -67529695 + L2 LINE L2 3191 3272 0 2362 101 3 3 chr20 4624549 4624857 -67529025 - AluSq SINE Alu -4 309 2 969 224 137 25 chr20 4625306 4625664 -67528218 + LTR16A1 LTR ERVL 7 404 -53 728 206 0 0 chr20 4625666 4625797 -67528085 + FLAM_A SINE Alu 2 132 -1 1837 167 0 4 chr20 4625822 4626091 -67527791 + AluJb SINE Alu 1 268 -44 295 175 16 0 chr20 4626199 4626262 -67527620 + LTR16A1 LTR ERVL 394 457 0 852 266 18 9 chr20 4627372 4627601 -67526281 - L2 LINE L2 -250 3063 2833 248 272 12 25 chr20 4628025 4628106 -67525776 + CT-rich Low_complexity Low_complexity 2 81 0 866 209 102 10 chr20 4628781 4628977 -67524905 + MIR SINE MIR 20 233 -29 198 320 78 31 chr20 4629075 4629203 -67524679 - L2 LINE L2 -822 2492 2359 1337 196 220 14 chr20 4629250 4629669 -67524213 + MLT1D LTR MaLR 1 505 0 821 133 0 66 chr20 4629912 4630063 -67523819 + FRAM SINE Alu 23 163 -13 183 80 0 0 chr20 4630104 4630129 -67523753 + (A)n Simple_repeat Simple_repeat 1 25 0 1540 95 30 22 chr20 4630302 4630481 -67523401 - AluSg/x SINE Alu -11 301 118 234 0 0 0 chr20 4630481 4630507 -67523375 + (TTTA)n Simple_repeat Simple_repeat 1 26 0 1540 95 30 22 chr20 4630507 4630558 -67523324 - AluSg/x SINE Alu -194 118 69 2222 92 0 16 chr20 4630610 4630924 -67522958 + AluSx SINE Alu 1 309 -3 375 212 118 0 chr20 4631360 4631445 -67522437 - MER63 DNA MER1_type -338 724 4 2083 246 97 69 chr20 4632065 4633156 -67520726 + L1MC5 LINE L1 6698 7777 -184 2165 107 7 0 chr20 4633156 4633456 -67520426 + AluSx SINE Alu 1 302 -10 2083 246 97 69 chr20 4633456 4633612 -67520270 + L1MC5 LINE L1 7777 7927 -34 1435 146 18 98 chr20 4633758 4634093 -67519789 + L1MB1 LINE L1 5860 6167 -1 22 0 0 0 chr20 4634094 4634116 -67519766 + AT_rich Low_complexity Low_complexity 1 22 0 221 208 21 0 chr20 4634184 4634232 -67519650 - L2 LINE L2 -1 3271 3223 1140 249 46 51 chr20 4634595 4634968 -67518914 - L1ME3 LINE L1 -51 6111 5741 225 65 0 0 chr20 4635503 4635534 -67518348 + (TG)n Simple_repeat Simple_repeat 2 32 0 281 278 19 37 chr20 4637885 4637993 -67515889 + L1ME3A LINE L1 5843 5948 -222 447 242 115 73 chr20 4638629 4638794 -67515088 - MIR SINE MIR -83 179 8 449 288 89 67 chr20 4638806 4639223 -67514659 - L2 LINE L2 -35 3237 2812 395 316 32 7 chr20 4639368 4639523 -67514359 - L2 LINE L2 -513 2801 2643 312 180 22 22 chr20 4641555 4641644 -67512238 + L1MB7 LINE L1 6096 6184 0 1474 199 0 7 chr20 4641685 4641989 -67511893 - AluJb SINE Alu 0 303 2 247 301 0 36 chr20 4642051 4642134 -67511748 - L2 LINE L2 -2 3311 3232 708 216 5 90 chr20 4642136 4642358 -67511524 - MLT1D LTR MaLR -302 203 1 529 303 34 6 chr20 4642417 4642595 -67511287 - MIR SINE MIR -55 207 25 211 226 57 0 chr20 4642852 4642905 -67510977 - L2 LINE L2 -2 3311 3256 233 272 12 0 chr20 4643750 4643831 -67510051 - L1ME LINE L1 -269 5852 5771 805 148 51 120 chr20 4644094 4644258 -67509624 + MER3 DNA MER1_type 2 149 -60 677 208 0 0 chr20 4644258 4644383 -67509499 - FLAM_A SINE Alu -8 125 1 805 148 51 120 chr20 4644383 4644434 -67509448 + MER3 DNA MER1_type 149 202 -7 21 57 0 0 chr20 4644503 4644538 -67509344 + AT_rich Low_complexity Low_complexity 1 35 0 1832 155 0 0 chr20 4644600 4644897 -67508985 - AluSg SINE Alu -13 297 1 27 29 0 0 chr20 4644897 4644931 -67508951 + AT_rich Low_complexity Low_complexity 1 34 0 1226 136 11 0 chr20 4644947 4645138 -67508744 - AluJb SINE Alu -119 193 1 233 240 13 40 chr20 4645146 4645221 -67508661 + MER113 DNA MER1_type? 439 511 -10 1299 164 8 4 chr20 4645649 4645887 -67507995 - AluSg SINE Alu -8 302 64 246 189 0 0 chr20 4645987 4646024 -67507858 - Alu SINE Alu -265 37 1 2391 64 0 3 chr20 4646039 4646336 -67507546 - AluSc SINE Alu -13 296 1 248 233 0 27 chr20 4646338 4646411 -67507471 - L1MC4a LINE L1 -1868 5940 5870 545 256 40 74 chr20 4646413 4646589 -67507293 + MIR SINE MIR 61 230 -32 1792 172 3 0 chr20 4646603 4646906 -67506976 - AluJb SINE Alu -8 304 1 1920 95 74 7 chr20 4646919 4647204 -67506678 - AluSx SINE Alu -8 304 1 880 296 57 55 chr20 4647216 4647729 -67506153 - L1MC4a LINE L1 -1993 5815 5302 26 50 0 0 chr20 4648130 4648170 -67505712 + AT_rich Low_complexity Low_complexity 1 40 0 2122 120 0 0 chr20 4648288 4648589 -67505293 + AluSg SINE Alu 1 301 -9 256 130 87 0 chr20 4648750 4648796 -67505086 - L2 LINE L2 -6 3307 3258 2162 233 33 43 chr20 4649399 4649415 -67504467 - L1M4c LINE L1 -4586 2371 2356 2093 94 16 13 chr20 4649415 4649722 -67504160 - AluSc SINE Alu -1 308 1 2162 233 33 43 chr20 4649722 4650443 -67503439 - L1M4c LINE L1 -4601 2356 1606 2034 109 0 0 chr20 4650444 4650720 -67503162 + AluSc SINE Alu 1 276 -33 1963 141 41 69 chr20 4650899 4651245 -67502637 - L1MC1 LINE L1 -143 6190 5855 2176 104 0 16 chr20 4651245 4651553 -67502329 - AluSx SINE Alu -9 303 1 1963 141 41 69 chr20 4651553 4651596 -67502286 - L1MC1 LINE L1 -478 5855 5812 1125 238 34 3 chr20 4651595 4651919 -67501963 + L1ME4a LINE L1 2152 2485 -3661 * 10952 140 95 50 chr20 4651929 4654251 -67499631 - L1MCa LINE L1 -3997 2429 5 239 267 50 25 chr20 4654813 4654933 -67498949 - L1M4 LINE L1 -3161 2985 2863 181 219 0 24 chr20 4655014 4655055 -67498827 + L2 LINE L2 3229 3268 -4 1799 227 59 70 chr20 4655312 4655907 -67497975 - MER77 LTR ERV1 -3 602 54 1592 293 107 20 chr20 4656322 4657595 -67496287 + L1ME4a LINE L1 2877 4260 -1886 249 250 75 66 chr20 4657997 4658134 -67495748 + L1ME4a LINE L1 5858 5999 -122 2065 118 10 0 chr20 4658134 4658431 -67495451 + AluSx SINE Alu 5 304 -8 249 250 75 66 chr20 4658431 4658521 -67495361 + L1ME4a LINE L1 5999 6087 -34 287 224 0 0 chr20 4659810 4659859 -67494023 + MER91B DNA MER1_type 4 52 -138 674 222 25 76 chr20 4660347 4660545 -67493337 - MIR SINE MIR 0 262 75 371 178 204 25 chr20 4660552 4660701 -67493181 + MLT1H LTR MaLR 53 310 -239 403 237 161 79 chr20 4660977 4661306 -67492576 - MER90 LTR ERV1 -219 356 1 272 30 0 0 chr20 4661785 4661818 -67492064 + MADE1 DNA Mariner 6 38 -42 439 293 97 49 chr20 4662309 4662646 -67491236 + HAL1b LINE L1 219 563 -785 382 85 34 0 chr20 4662652 4662711 -67491171 - MLT2C1 LTR ERVL 0 520 460 251 158 58 42 chr20 4662712 4662832 -67491050 + (TATAA)n Simple_repeat Simple_repeat 4 125 0 224 137 69 8 chr20 4662878 4663009 -67490873 + (TA)n Simple_repeat Simple_repeat 2 140 0 213 196 0 0 chr20 4663030 4663076 -67490806 + (TATG)n Simple_repeat Simple_repeat 3 48 0 1777 160 66 0 chr20 4663206 4663525 -67490357 - MLT2C1 LTR ERVL -57 340 1 1192 133 0 0 chr20 4663569 4663742 -67490140 + AluSp SINE Alu 134 306 -7 22 0 0 0 chr20 4664112 4664134 -67489748 + AT_rich Low_complexity Low_complexity 1 22 0 915 190 0 22 chr20 4664256 4664435 -67489447 + MER5B DNA MER1_type 4 178 0 239 242 0 16 chr20 4664583 4664645 -67489237 + MER5A DNA MER1_type 9 69 -120 405 369 77 45 chr20 4664661 4664782 -67489100 + L2 LINE L2 2624 2740 -532 3463 154 43 60 chr20 4664782 4665485 -67488397 + LTR8 LTR ERV1 1 691 0 405 369 77 45 chr20 4665485 4665803 -67488079 + L2 LINE L2 2740 3087 -185 5342 76 18 7 chr20 4665803 4666537 -67487345 + L1PA13 LINE L1 5419 6160 -3 405 369 77 45 chr20 4666537 4666685 -67487197 + L2 LINE L2 3087 3229 -43 1288 254 80 15 chr20 4667655 4668132 -67485750 + HAL1 LINE L1 1705 2212 -295 5330 136 12 16 chr20 4668195 4669041 -67484841 + MER4D LTR ERV1 62 903 0 243 286 128 36 chr20 4669041 4669761 -67484121 - L1M4 LINE L1 -748 5398 4613 267 165 66 11 chr20 4669791 4669882 -67484000 + (TTAAA)n Simple_repeat Simple_repeat 4 99 0 532 321 103 26 chr20 4669922 4670271 -67483611 + L1M4 LINE L1 2390 2765 -3381 283 214 18 18 chr20 4670410 4670522 -67483360 + (CCG)n Simple_repeat Simple_repeat 2 113 0 22 56 0 0 chr20 4670770 4670806 -67483076 + GC_rich Low_complexity Low_complexity 1 36 0 476 251 150 24 chr20 4671752 4671959 -67481923 + MIR SINE MIR 7 239 -23 289 340 52 43 chr20 4673241 4673565 -67480317 + L2 LINE L2 2304 2630 -684 276 100 0 0 chr20 4674025 4674065 -67479817 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 893 94 0 24 chr20 4674066 4674193 -67479689 - FLAM_C SINE Alu -19 124 1 2201 87 10 0 chr20 4674373 4674672 -67479210 + AluSc SINE Alu 1 302 -7 254 252 165 52 chr20 4674978 4675093 -67478789 + MIR3 SINE MIR 33 160 -48 1710 159 3 37 chr20 4675148 4675469 -67478413 + AluJb SINE Alu 1 310 -2 245 352 0 0 chr20 4675695 4675766 -67478116 + HAL1 LINE L1 14 84 -2423 482 261 31 15 chr20 4676063 4676133 -67477749 - L2 LINE L2 0 3313 3246 186 43 0 0 chr20 4676133 4676156 -67477726 + (TA)n Simple_repeat Simple_repeat 2 24 0 1628 160 0 42 chr20 4676157 4676469 -67477413 - AluJo SINE Alu -13 299 1 482 261 31 15 chr20 4676469 4676526 -67477356 - L2 LINE L2 -66 3247 3182 704 289 97 62 chr20 4677454 4677886 -67475996 - MLT1J2 LTR MaLR -3 447 1 258 229 16 16 chr20 4678986 4679047 -67474835 + MIR SINE MIR 92 152 -110 471 277 125 64 chr20 4679944 4680287 -67473595 + MLT1I LTR MaLR 46 409 0 434 263 126 11 chr20 4680352 4680527 -67473355 + L1ME LINE L1 5566 5760 -410 220 362 31 6 chr20 4680630 4680793 -67473089 - L2 LINE L2 -1620 1694 1528 1702 230 69 17 chr20 4681195 4681599 -67472283 - MER89-int LTR ERV1 -4582 2219 1795 471 18 0 0 chr20 4681706 4681762 -67472120 + (TA)n Simple_repeat Simple_repeat 1 56 0 1901 143 6 25 chr20 4681787 4682101 -67471781 - MLT2C1 LTR ERVL -59 338 31 4161 244 110 48 chr20 4682102 4683596 -67470286 - MER89-int LTR ERV1 -5212 1589 3 1961 154 63 48 chr20 4683598 4683920 -67469962 - MER89 LTR ERV1 0 559 128 1760 164 43 0 chr20 4683920 4684219 -67469663 + AluJb SINE Alu 1 312 0 1961 154 63 48 chr20 4684219 4684344 -67469538 - MER89 LTR ERV1 -431 128 6 1091 121 86 0 chr20 4685209 4685261 -67468621 - AluSx SINE Alu -123 189 143 290 45 23 0 chr20 4685261 4685305 -67468577 + (TTTA)n Simple_repeat Simple_repeat 2 46 0 1091 121 86 0 chr20 4685305 4685426 -67468456 - AluSx SINE Alu -169 143 1 506 347 155 14 chr20 4685440 4685773 -67468109 - L2 LINE L2 0 3313 2902 9211 45 1 0 chr20 4685773 4686843 -67467039 - MER11C LTR ERVK 0 1071 1 506 347 155 14 chr20 4686843 4686947 -67466935 - L2 LINE L2 -411 2902 2814 1116 143 5 69 chr20 4687053 4687269 -67466613 + AluJb SINE Alu 1 202 -110 867 104 0 30 chr20 4687269 4687403 -67466479 - AluSg/x SINE Alu -10 302 173 657 167 9 0 chr20 4687403 4687511 -67466371 + AluJb SINE Alu 190 298 -14 498 278 200 4 chr20 4687708 4687978 -67465904 - L2 LINE L2 0 3313 2991 1145 279 141 39 chr20 4688117 4688414 -67465468 - L2 LINE L2 -706 2608 2342 1609 149 26 48 chr20 4688414 4688723 -67465159 - AluJo SINE Alu -10 302 1 1145 279 141 39 chr20 4688723 4689136 -67464746 - L2 LINE L2 -972 2342 1826 255 315 9 9 chr20 4689144 4689277 -67464605 + L1P4 LINE L1 5351 5483 -671 1511 177 46 87 chr20 4689564 4689793 -67464089 - MLT1A2 LTR MaLR 0 374 166 1993 138 0 0 chr20 4689793 4690089 -67463793 - AluJb SINE Alu -11 301 6 1511 177 46 87 chr20 4690089 4690249 -67463633 - MLT1A2 LTR MaLR -208 166 1 1966 159 8 74 chr20 4690382 4690773 -67463109 - MLT1A1 LTR MaLR 0 365 1 345 145 0 0 chr20 4690793 4690855 -67463027 + (T)n Simple_repeat Simple_repeat 1 62 0 1993 131 0 7 chr20 4690876 4691181 -67462701 - AluSg SINE Alu -7 303 1 325 197 39 55 chr20 4691197 4691324 -67462558 - L1M4 LINE L1 -2123 4521 4397 188 234 62 47 chr20 4691997 4692061 -67461821 + L2 LINE L2 1764 1828 -1486 989 192 12 0 chr20 4692115 4692282 -67461600 - FAM SINE Alu -6 169 1 729 177 0 0 chr20 4692300 4692424 -67461458 - L1ME3A LINE L1 -5 6165 6042 22 0 0 0 chr20 4692813 4692835 -67461047 + AT_rich Low_complexity Low_complexity 1 22 0 2245 67 0 3 chr20 4692844 4693152 -67460730 + AluY SINE Alu 1 307 0 1708 178 57 22 chr20 4693153 4693519 -67460363 - L1MB8 LINE L1 -7 6171 5793 774 164 47 8 chr20 4693539 4693667 -67460215 + FLAM_C SINE Alu 1 133 0 5025 185 22 100 chr20 4693672 4694663 -67459219 - L1M4 LINE L1 -5350 1192 324 1929 129 28 0 chr20 4694663 4694950 -67458932 - AluSx SINE Alu -17 295 1 5025 185 22 100 chr20 4694950 4695251 -67458631 - L1M4 LINE L1 -6218 324 1 1966 66 66 4 chr20 4695254 4695513 -67458369 - THE1C LTR MaLR 0 375 101 949 254 108 20 chr20 4695512 4695854 -67458028 + MLT1L LTR MaLR 243 614 -1 * 2281 81 0 0 chr20 4696578 4696876 -67457006 - AluY SINE Alu -13 298 1 770 128 43 0 chr20 4697014 4697131 -67456751 - AluJo SINE Alu -176 136 15 217 354 66 21 chr20 4697445 4697644 -67456238 + MIR SINE MIR 2 206 -56 1800 247 42 6 chr20 4697672 4698145 -67455737 - LTR16C LTR ERVL 0 491 2 198 279 16 16 chr20 4700239 4700300 -67453582 + L2 LINE L2 3004 3064 -208 200 94 0 31 chr20 4700380 4700412 -67453470 + (TCC)n Simple_repeat Simple_repeat 3 33 0 234 0 0 0 chr20 4702250 4702276 -67451606 + (TC)n Simple_repeat Simple_repeat 1 26 0 549 299 12 46 chr20 4703964 4704205 -67449677 - L1MC4a LINE L1 -1894 5914 5682 637 234 158 85 chr20 4704209 4704670 -67449212 - MLT1J LTR MaLR -5 506 12 883 278 60 3 chr20 4704674 4704958 -67448924 - L1MC4a LINE L1 -2152 5656 5357 421 217 101 22 chr20 4705178 4705316 -67448566 - MIR SINE MIR -96 166 18 200 33 0 33 chr20 4705360 4705390 -67448492 + (TTTTA)n Simple_repeat Simple_repeat 4 32 0 45404 35 3 2 chr20 4705390 4711521 -67442361 - L1PA3 LINE L1 -16 6139 1 289 250 57 34 chr20 4711537 4711625 -67442257 - MIR3 SINE MIR -23 185 96 254 188 21 0 chr20 4712201 4712249 -67441633 + MLT1L LTR MaLR 120 168 -447 2400 64 0 0 chr20 4712394 4712691 -67441191 - AluY SINE Alu -14 297 1 347 239 185 8 chr20 4712947 4713077 -67440805 + MLT1L LTR MaLR 446 598 -17 711 300 65 43 chr20 4713149 4713689 -67440193 - L1MC4a LINE L1 -1940 5868 5317 372 345 45 61 chr20 4713720 4713850 -67440032 - L1MC4a LINE L1 -860 5286 5155 15558 32 0 1 chr20 4713850 4716433 -67437449 - L1PA4 LINE L1 -6 6149 3565 372 345 45 61 chr20 4716433 4716661 -67437221 - L1MC4a LINE L1 -991 5155 4934 2287 239 49 42 chr20 4717395 4717768 -67436114 + L1ME3 LINE L1 5466 5835 -327 2275 154 26 8 chr20 4717768 4718151 -67435731 + MLT1B LTR MaLR 1 390 0 2287 239 49 42 chr20 4718151 4718200 -67435682 + L1ME3 LINE L1 5835 5882 -280 1854 122 0 0 chr20 4718200 4718488 -67435394 + AluSx SINE Alu 27 314 0 2287 239 49 42 chr20 4718488 4718752 -67435130 + L1ME3 LINE L1 5882 6159 -3 360 294 27 55 chr20 4719615 4719761 -67434121 - MIR SINE MIR -64 144 3 637 142 67 8 chr20 4719811 4719945 -67433937 + MER96B DNA MER1_type? 80 221 -196 366 374 138 16 chr20 4720799 4721045 -67432837 - L2 LINE L2 -2 3270 2995 318 98 0 0 chr20 4721067 4721118 -67432764 + (ATG)n Simple_repeat Simple_repeat 3 53 0 229 136 182 30 chr20 4722989 4723055 -67430827 + LTR33A LTR ERVL 7 82 -441 461 303 161 8 chr20 4723094 4723348 -67430534 + LTR16C LTR ERVL 169 461 -30 392 245 19 19 chr20 4723538 4723644 -67430238 - MIR3 SINE MIR -6 202 97 210 337 23 0 chr20 4724009 4724095 -67429787 - L2 LINE L2 -220 3052 2965 424 304 88 0 chr20 4724168 4724349 -67429533 + MIR SINE MIR 2 198 -64 1194 281 98 7 chr20 4724604 4725052 -67428830 - LTR16C LTR ERVL -2 489 1 909 256 86 6 chr20 4725632 4725956 -67427926 - LTR16C LTR ERVL -52 439 90 205 204 41 0 chr20 4726082 4726131 -67427751 + L2 LINE L2 2716 2766 -548 333 296 107 15 chr20 4726745 4726941 -67426941 + LTR16C LTR ERVL 1 214 -277 552 228 28 61 chr20 4726985 4727165 -67426717 + LTR16C LTR ERVL 306 479 -12 628 266 88 57 chr20 4728388 4728685 -67425197 + MLT1K LTR MaLR 103 408 -180 306 194 0 0 chr20 4728712 4728774 -67425108 + GA-rich Low_complexity Low_complexity 2 63 0 463 333 145 0 chr20 4728875 4729103 -67424779 + LTR16C LTR ERVL 3 263 -228 609 205 8 0 chr20 4729156 4729273 -67424609 + LTR16C LTR ERVL 370 487 -4 2316 145 19 128 chr20 4729463 4729940 -67423942 - MSTA LTR MaLR -1 425 1 1269 283 82 50 chr20 4730442 4730857 -67423025 + L2 LINE L2 2449 2849 -464 1939 166 0 7 chr20 4730857 4731159 -67422723 - AluSx SINE Alu -12 300 1 1269 283 82 50 chr20 4731159 4731575 -67422307 + L2 LINE L2 2849 3313 0 21 0 0 0 chr20 4731641 4731662 -67422220 + AT_rich Low_complexity Low_complexity 1 21 0 4104 108 0 0 chr20 4731966 4732520 -67421362 - MER41A LTR ERV1 0 554 1 303 253 20 20 chr20 4733069 4733168 -67420714 - MIR SINE MIR -8 254 156 5469 152 46 20 chr20 4733202 4733505 -67420377 - L1MDb LINE L1 -3890 2516 2222 4148 100 32 0 chr20 4733505 4734067 -67419815 + LTR19B LTR ERV1 1 580 0 5469 152 46 20 chr20 4734067 4734931 -67418951 - L1MDb LINE L1 -4184 2222 1316 218 288 43 0 chr20 4734934 4735022 -67418860 + MIR SINE MIR 97 151 -57 2064 104 24 7 chr20 4735593 4735881 -67418001 - AluSc SINE Alu -16 293 1 547 174 174 19 chr20 4736650 4736811 -67417071 - MER5A DNA MER1_type 0 189 4 2582 78 0 0 chr20 4737007 4737316 -67416566 + AluY SINE Alu 3 311 0 243 279 39 34 chr20 4737503 4737684 -67416198 + L1ME4a LINE L1 4880 5060 -1086 21 36 0 0 chr20 4737730 4737758 -67416124 + AT_rich Low_complexity Low_complexity 1 28 0 230 139 0 0 chr20 4737853 4737889 -67415993 + L1MC3 LINE L1 6079 6114 -1671 2231 184 59 36 chr20 4738250 4738313 -67415569 + MLT1D LTR MaLR 1 61 -444 1872 160 39 64 chr20 4738313 4738719 -67415163 - MSTD LTR MaLR 0 396 1 2231 184 59 36 chr20 4738719 4739149 -67414733 + MLT1D LTR MaLR 61 505 0 592 291 73 36 chr20 4739156 4739569 -67414313 + L1ME4a LINE L1 5513 5940 -181 302 342 91 17 chr20 4740317 4740548 -67413334 + MLT1K LTR MaLR 170 417 -171 803 178 127 35 chr20 4740932 4741129 -67412753 - MLT1I LTR MaLR 0 409 195 788 196 18 48 chr20 4741184 4741249 -67412633 + MER45A DNA AcHobo 1 66 -1515 2626 53 0 0 chr20 4741249 4741551 -67412331 - AluY SINE Alu -9 302 1 788 196 18 48 chr20 4741551 4741653 -67412229 + MER45A DNA AcHobo 66 163 -15 1957 157 13 10 chr20 4741763 4742069 -67411813 - AluJb SINE Alu 0 312 6 502 291 6 28 chr20 4742071 4742253 -67411629 - MLT1I LTR MaLR -231 178 1 1015 245 155 31 chr20 4743436 4743824 -67410058 + LTR16A1 LTR ERVL 6 441 -16 187 231 0 0 chr20 4744985 4745024 -67408858 + L2 LINE L2 3201 3239 -33 240 324 171 9 chr20 4745629 4745740 -67408142 - MIR SINE MIR -64 144 16 881 201 140 13 chr20 4745895 4746124 -67407758 + LOR1a LTR ERV1 240 497 0 1672 241 48 31 chr20 4746399 4746877 -67407005 + LTR16C LTR ERVL 6 491 0 181 216 27 0 chr20 4748120 4748157 -67405725 - MIR SINE MIR -117 145 108 1192 253 88 62 chr20 4748266 4748800 -67405082 - MLT1H LTR MaLR 0 549 2 200 273 18 0 chr20 4749649 4749704 -67404178 - MER5C DNA MER1_type -268 56 1 657 267 138 57 chr20 4749739 4750057 -67403825 + MER115 DNA AcHobo 119 462 -231 182 242 15 0 chr20 4750775 4750841 -67403041 + (CA)n Simple_repeat Simple_repeat 2 68 0 2291 145 89 2 chr20 4751923 4752220 -67401662 - MSTC LTR MaLR 0 428 87 2591 59 0 3 chr20 4752220 4752526 -67401356 - AluY SINE Alu -6 305 1 2291 145 89 2 chr20 4752526 4752622 -67401260 - MSTC LTR MaLR -341 87 1 1359 261 77 3 chr20 4754560 4754936 -67398946 - LTR16C LTR ERVL -3 488 85 2274 93 31 3 chr20 4755755 4756045 -67397837 + AluSx SINE Alu 1 298 -14 319 113 141 14 chr20 4756162 4756233 -67397649 + L1MB3 LINE L1 6103 6182 -1 190 188 0 31 chr20 4757407 4757471 -67396411 + CT-rich Low_complexity Low_complexity 3 64 0 312 299 189 0 chr20 4757850 4757977 -67395905 - MER5A DNA MER1_type 0 189 39 529 227 93 7 chr20 4758028 4758178 -67395704 - MER5B DNA MER1_type -15 163 1 280 200 15 0 chr20 4758632 4758697 -67395185 + MER116 DNA Mariner 1 66 -14 308 267 12 23 chr20 4759132 4759218 -67394664 - L2 LINE L2 0 3272 3188 656 212 190 0 chr20 4759278 4759457 -67394425 - LTR16A LTR ERVL 0 450 238 1250 212 60 50 chr20 4759506 4759903 -67393979 - Charlie4a DNA MER1_type -85 423 23 2492 60 16 0 chr20 4760163 4760478 -67393404 - L1PA7 LINE L1 0 6154 5835 758 73 73 0 chr20 4760478 4760588 -67393294 + L1PA7 LINE L1 5728 5845 -327 300 289 87 47 chr20 4761038 4761187 -67392695 + MLT1I LTR MaLR 60 214 -195 275 226 10 126 chr20 4761265 4761392 -67392490 + MLT1I LTR MaLR 290 533 -16 288 280 112 9 chr20 4761683 4761790 -67392092 - L2 LINE L2 -8 3305 3188 930 269 143 36 chr20 4762435 4762646 -67391236 - MLT1J LTR MaLR -36 475 288 1883 148 58 0 chr20 4762646 4762937 -67390945 + AluJb SINE Alu 1 308 -4 930 269 143 36 chr20 4762937 4763133 -67390749 - MLT1J LTR MaLR -223 288 23 463 283 118 48 chr20 4763133 4763448 -67390434 - MLT1I LTR MaLR 0 409 73 220 353 88 20 chr20 4764804 4764906 -67388976 - L2 LINE L2 -9 3263 3155 29 60 0 0 chr20 4764964 4765014 -67388868 + AT_rich Low_complexity Low_complexity 1 50 0 2335 113 0 0 chr20 4765269 4765580 -67388302 - AluSq SINE Alu -2 311 1 21 0 0 0 chr20 4765641 4765662 -67388220 + AT_rich Low_complexity Low_complexity 1 21 0 4460 170 12 35 chr20 4766273 4767151 -67386731 - L1MB8 LINE L1 -11 6447 5590 1093 231 30 36 chr20 4767152 4767489 -67386393 - L1MB8 LINE L1 -962 5464 5130 4284 189 44 43 chr20 4767497 4768365 -67385517 - L1MB8 LINE L1 -2797 3629 2763 2301 92 7 0 chr20 4768365 4768657 -67385225 - AluY SINE Alu -17 294 1 4284 189 44 43 chr20 4768657 4769154 -67384728 - L1MB8 LINE L1 -3663 2763 2268 1065 110 64 0 chr20 4769154 4769327 -67384555 + L1PB1 LINE L1 5968 6151 0 4284 189 44 43 chr20 4769327 4769815 -67384067 - L1MB8 LINE L1 -4158 2268 1770 2151 141 0 0 chr20 4769815 4770112 -67383770 - AluSx SINE Alu -15 297 1 4284 189 44 43 chr20 4770112 4770178 -67383704 - L1MB8 LINE L1 -4656 1770 1706 6830 166 56 44 chr20 4770226 4771693 -67382189 - L1MCa LINE L1 -4935 1491 7 2501 235 60 16 chr20 4771679 4771754 -67382128 - L1M4 LINE L1 -1816 5141 5071 * 438 36 0 0 chr20 4771754 4771810 -67382072 + (TG)n Simple_repeat Simple_repeat 2 57 0 2501 235 60 16 chr20 4771810 4772435 -67381447 - L1M4 LINE L1 -1886 5071 4410 1282 179 20 32 chr20 4772450 4772701 -67381181 - AluJo SINE Alu -11 301 54 2112 242 47 22 chr20 4772723 4773534 -67380348 - L1M4 LINE L1 -2566 4391 3561 2415 77 0 10 chr20 4773541 4773838 -67380044 - AluY SINE Alu -17 294 1 2743 215 26 72 chr20 4773842 4774559 -67379323 - L1M4 LINE L1 -4659 2300 1659 2226 107 7 0 chr20 4774559 4774848 -67379034 + AluSc SINE Alu 1 291 -18 2743 215 26 72 chr20 4774848 4775284 -67378598 - L1M4 LINE L1 -5300 1659 1205 2042 288 32 25 chr20 4775827 4776668 -67377214 - L1M4 LINE L1 -5914 945 29 1051 287 158 25 chr20 4776741 4777006 -67376876 + L2 LINE L2 2460 2688 -625 2209 151 100 5 chr20 4777006 4777397 -67376485 + MSTA LTR MaLR 1 428 0 1051 287 158 25 chr20 4777397 4777899 -67375983 + L2 LINE L2 2688 3313 0 458 219 185 14 chr20 4778888 4779034 -67374848 + MER5A DNA MER1_type 18 188 -1 493 221 106 0 chr20 4779042 4779155 -67374727 + MER58A DNA MER1_type 1 125 0 2234 158 49 30 chr20 4779155 4779677 -67374205 + MLT2A2 LTR ERVL 1 554 0 649 158 0 0 chr20 4779677 4779770 -67374112 + MER58A DNA MER1_type 121 213 -11 228 237 34 17 chr20 4780095 4780154 -67373728 + L2 LINE L2 3205 3264 -8 329 241 85 42 chr20 4780269 4780404 -67373478 - MIR SINE MIR -63 145 19 346 332 71 33 chr20 4781017 4781354 -67372528 + LTR16C LTR ERVL 121 470 -21 396 239 50 111 chr20 4781367 4781727 -67372155 - L1M4 LINE L1 -1907 4239 3902 2225 123 123 3 chr20 4781756 4782137 -67371745 - MSTA LTR MaLR 0 428 2 324 319 51 37 chr20 4782291 4782507 -67371375 - MLT1H LTR MaLR -300 249 31 299 226 52 43 chr20 4782537 4782652 -67371230 - L1M4 LINE L1 -2234 3912 3797 1945 179 40 37 chr20 4782997 4783543 -67370339 + MLT2A2 LTR ERVL 3 554 0 2477 161 38 5 chr20 4783549 4783971 -67369911 + MLT1C LTR MaLR 29 464 -3 217 306 14 0 chr20 4784380 4784452 -67369430 - MIR SINE MIR -109 153 81 2022 159 34 41 chr20 4784484 4784805 -67369077 - L1PB4 LINE L1 -7 6149 5830 1670 173 38 14 chr20 4784805 4785094 -67368788 - AluJb SINE Alu -16 296 1 2022 159 34 41 chr20 4785094 4785186 -67368696 - L1PB4 LINE L1 -326 5830 5739 458 272 89 19 chr20 4785224 4785382 -67368500 + MER117 DNA MER1_type 1 169 -28 271 276 100 119 chr20 4785997 4786131 -67367751 - L2 LINE L2 0 3272 3137 2428 67 0 0 chr20 4786131 4786428 -67367454 - AluY SINE Alu -14 297 1 271 276 100 119 chr20 4786428 4786604 -67367278 - L2 LINE L2 -135 3137 2968 316 260 156 21 chr20 4787193 4787289 -67366593 - L2 LINE L2 -1 3271 3163 1370 238 125 14 chr20 4787746 4788170 -67365712 + MLT1H LTR MaLR 43 513 -36 2020 127 13 22 chr20 4788170 4788485 -67365397 - L1MC1 LINE L1 -1 6332 6021 484 284 71 31 chr20 4789702 4789927 -67363955 + MLT1K LTR MaLR 332 565 -23 267 233 0 44 chr20 4791017 4791107 -67362775 - LTR67 LTR ERVL -4 553 468 1631 301 60 2 chr20 4791107 4791645 -67362237 - MLT2E LTR ERVL 0 628 60 2290 112 3 0 chr20 4792093 4792388 -67361494 - AluSx SINE Alu -16 296 1 260 309 253 19 chr20 4792388 4792653 -67361229 + L3 LINE CR1 733 1059 -518 285 323 16 55 chr20 4793044 4793171 -67360711 + L3 LINE CR1 1397 1518 -59 620 227 116 17 chr20 4793943 4794115 -67359767 + MER5A DNA MER1_type 1 189 0 755 165 23 78 chr20 4794292 4794496 -67359386 + MER39B LTR ERV1 6 246 -461 1834 138 3 46 chr20 4794525 4794850 -67359032 + L1MA7 LINE L1 5398 5708 -583 3375 123 32 28 chr20 4794989 4795556 -67358326 + L1MA7 LINE L1 5720 6288 -3 3083 145 18 16 chr20 4795590 4796087 -67357795 + MER39 LTR ERV1 210 707 0 2211 116 0 3 chr20 4796624 4796926 -67356956 + AluSg SINE Alu 1 301 -9 1414 128 14 28 chr20 4798141 4798359 -67355523 - AluJo SINE Alu -95 217 3 2267 105 0 0 chr20 4798423 4798717 -67355165 - AluSg SINE Alu -14 296 3 1866 98 91 14 chr20 4799130 4799406 -67354476 + AluSx SINE Alu 1 297 -15 821 176 48 53 chr20 4799816 4800004 -67353878 - MER5A DNA MER1_type -2 187 1 849 168 0 142 chr20 4800326 4800457 -67353425 - AluJb SINE Alu -10 302 205 630 60 0 0 chr20 4800457 4800540 -67353342 - L1PB1 LINE L1 0 6151 6069 849 168 0 142 chr20 4800540 4800598 -67353284 - AluJb SINE Alu -107 205 140 1518 246 64 16 chr20 4800617 4801052 -67352830 - MLT1C LTR MaLR -1 466 11 469 204 78 131 chr20 4801196 4801387 -67352495 + MER5A DNA MER1_type 9 189 0 521 306 99 55 chr20 4801391 4802270 -67351612 - L1M4 LINE L1 -1243 4903 3982 388 266 63 67 chr20 4802295 4802802 -67351080 - L1MDa LINE L1 -961 1940 1296 875 180 17 45 chr20 4802934 4803112 -67350770 - MER5B DNA MER1_type -4 174 2 909 287 103 25 chr20 4803829 4804734 -67349148 + L1ME3 LINE L1 4931 5906 -256 2155 186 46 5 chr20 4804770 4805321 -67348561 + L1MC/D LINE L1 5156 5770 -472 311 217 0 29 chr20 4805321 4805390 -67348492 + LTR16C LTR ERVL 425 491 0 258 265 9 104 chr20 4805495 4805725 -67348157 + HAL1 LINE L1 953 1160 -1347 453 325 50 54 chr20 4805833 4806337 -67347545 - L1M4c LINE L1 -3235 3191 2690 4880 229 125 29 chr20 4806384 4807330 -67346552 + L1MD1 LINE L1 16 1155 -5385 2147 94 3 24 chr20 4807330 4807650 -67346232 + AluSq SINE Alu 2 315 0 4880 229 125 29 chr20 4807650 4808162 -67345720 + L1MD1 LINE L1 1155 1617 -4923 10768 25 0 0 chr20 4808172 4810131 -67343751 - L1PA2 LINE L1 0 6155 4196 11030 167 26 69 chr20 4810133 4812987 -67340895 + L1MD1 LINE L1 3338 6013 -623 2473 80 0 0 chr20 4812987 4813298 -67340584 + AluY SINE Alu 1 311 0 11030 167 26 69 chr20 4813298 4813881 -67340001 + L1MD1 LINE L1 6013 6619 -17 302 298 112 22 chr20 4813909 4814087 -67339795 - L1M4c LINE L1 -3959 2467 2274 443 277 162 16 chr20 4814447 4814677 -67339205 - L1M4c LINE L1 -839 1948 1481 406 145 0 0 chr20 4814781 4814843 -67339039 + L1MD2 LINE L1 6068 6129 -230 532 209 86 94 chr20 4814847 4815081 -67338801 + L2 LINE L2 3077 3308 -5 331 257 51 91 chr20 4815152 4815267 -67338615 + HAL1 LINE L1 992 1110 -1397 8067 65 31 2 chr20 4815267 4816246 -67337636 - LTR13 LTR ERVK 0 1007 1 331 257 51 91 chr20 4816246 4816383 -67337499 + HAL1 LINE L1 1110 1234 -1273 290 259 82 13 chr20 4816369 4816527 -67337355 - L1M4 LINE L1 -3126 3020 2852 * 4647 138 72 35 chr20 4817162 4817612 -67336270 - L1MA7 LINE L1 -6 6285 5853 2442 76 0 3 chr20 4817612 4817915 -67335967 - AluY SINE Alu -9 302 1 4647 138 72 35 chr20 4817915 4818356 -67335526 - L1MA7 LINE L1 -438 5853 5361 * 9107 154 43 7 chr20 4818354 4819945 -67333937 + L1 LINE L1 3656 5311 -835 207 0 0 0 chr20 4819945 4819968 -67333914 + (CAA)n Simple_repeat Simple_repeat 2 24 0 9107 154 43 7 chr20 4819968 4820030 -67333852 + L1 LINE L1 5311 5369 -777 342 0 0 0 chr20 4820202 4820240 -67333642 + (TG)n Simple_repeat Simple_repeat 2 39 0 1649 175 51 7 chr20 4820693 4820985 -67332897 - AluJb SINE Alu -7 305 1 317 356 47 13 chr20 4821191 4821340 -67332542 + L1ME LINE L1 4673 4826 -1320 459 237 0 17 chr20 4821816 4821934 -67331948 + L1ME LINE L1 5567 5682 -439 261 163 0 0 chr20 4821956 4822005 -67331877 + (CA)n Simple_repeat Simple_repeat 2 50 0 1327 154 0 5 chr20 4822115 4822316 -67331566 + MER20 DNA MER1_type 20 219 0 222 267 0 0 chr20 4822614 4822674 -67331208 - MIR SINE MIR 0 262 203 264 228 176 29 chr20 4822784 4822920 -67330962 - L1ME4a LINE L1 -96 6025 5870 197 183 17 0 chr20 4823029 4823089 -67330793 + GA-rich Low_complexity Low_complexity 2 62 0 350 230 137 36 chr20 4823094 4823233 -67330649 + L1MC5 LINE L1 6957 7109 -852 181 229 0 42 chr20 4823269 4823317 -67330565 + L2 LINE L2 3227 3272 0 351 260 48 10 chr20 4824101 4824205 -67329677 - MIR3 SINE MIR -54 154 47 396 224 70 29 chr20 4824857 4825007 -67328875 + MIR SINE MIR 16 182 -62 26 0 0 0 chr20 4825915 4825941 -67327941 + AT_rich Low_complexity Low_complexity 1 26 0 247 325 103 0 chr20 4825989 4826106 -67327776 + MLT1J2 LTR MaLR 34 162 -288 333 265 12 12 chr20 4826137 4826220 -67327662 + MLT1I LTR MaLR 196 278 -131 243 339 42 0 chr20 4826347 4826465 -67327417 - MIR3 SINE MIR -53 155 33 245 311 56 0 chr20 4827249 4827339 -67326543 - L2 LINE L2 -18 3295 3201 1074 184 44 73 chr20 4827523 4827937 -67325945 - MLT1A1 LTR MaLR 0 396 1 293 361 28 7 chr20 4828053 4828197 -67325685 - L2 LINE L2 -507 2807 2661 454 328 31 0 chr20 4828634 4828762 -67325120 + MER91C DNA MER1_type 9 140 0 280 175 0 289 chr20 4828796 4828962 -67324920 + MER5B DNA MER1_type 59 176 -2 297 348 170 8 chr20 4828975 4829357 -67324525 + L2 LINE L2 1135 1578 -1736 591 235 184 26 chr20 4829444 4829678 -67324204 - MLT1H1 LTR MaLR 0 555 285 532 286 83 18 chr20 4829773 4829990 -67323892 - MLT1H1 LTR MaLR -244 305 75 1604 188 16 12 chr20 4830745 4831065 -67322817 + MER74C LTR ERVL 155 460 0 1117 303 85 16 chr20 4831899 4832344 -67321538 + LTR16C LTR ERVL 1 476 -15 2064 144 0 0 chr20 4832549 4832847 -67321035 - AluSx SINE Alu -14 298 1 231 114 0 0 chr20 4833377 4833412 -67320470 + (TG)n Simple_repeat Simple_repeat 2 36 0 1261 261 93 3 chr20 4833493 4833880 -67320002 - MLT2E LTR ERVL -206 422 1 307 363 109 11 chr20 4835082 4835459 -67318423 + L1ME4a LINE L1 5531 5944 -226 228 304 0 0 chr20 4835799 4835868 -67318014 + L2 LINE L2 1869 1937 -1377 1656 206 165 15 chr20 4835906 4836386 -67317496 - L1ME1 LINE L1 -34 6132 5581 2276 237 13 27 chr20 4836548 4837097 -67316785 + MER87 LTR ERV1 1 541 0 1887 199 36 117 chr20 4837401 4837789 -67316093 - MLT1E2 LTR MaLR 0 626 208 2846 62 84 77 chr20 4837789 4838243 -67315639 + L1PA7 LINE L1 5698 6154 0 1887 199 36 117 chr20 4838243 4838429 -67315453 - MLT1E2 LTR MaLR -418 208 103 962 236 56 87 chr20 4838429 4838612 -67315270 + MLT1C LTR MaLR 1 188 -279 2316 66 3 17 chr20 4838612 4838900 -67314982 + AluSp SINE Alu 30 313 0 962 236 56 87 chr20 4838900 4839198 -67314684 + MLT1C LTR MaLR 188 467 0 1887 199 36 117 chr20 4839198 4839240 -67314642 - MLT1E2 LTR MaLR -523 103 59 236 258 30 0 chr20 4839282 4839348 -67314534 - MLT1E2 LTR MaLR -434 71 4 419 281 98 38 chr20 4839351 4839586 -67314296 + L2 LINE L2 2478 2726 -588 597 300 34 39 chr20 4839586 4840015 -67313867 - MLT1J LTR MaLR 0 511 71 10539 74 21 0 chr20 4840138 4842294 -67311588 - L1PA7 LINE L1 -8 6146 3960 2201 125 10 3 chr20 4842296 4842601 -67311281 - AluSx SINE Alu -5 307 1 2000 105 3 46 chr20 4842712 4843018 -67310864 - AluSc SINE Alu -16 293 1 260 319 57 110 chr20 4843516 4843833 -67310049 + L2 LINE L2 2956 3255 -17 420 261 49 33 chr20 4843952 4844136 -67309746 + L1ME4a LINE L1 5931 6117 -4 297 75 0 0 chr20 4844176 4844216 -67309666 + (TG)n Simple_repeat Simple_repeat 1 40 0 868 200 65 28 chr20 4845034 4845249 -67308633 - MIR SINE MIR 0 262 40 567 224 133 7 chr20 4845624 4845767 -67308115 - MER5A DNA MER1_type -15 174 14 311 215 0 15 chr20 4846205 4846270 -67307612 + L2 LINE L2 3242 3305 -8 1941 146 73 6 chr20 4846391 4846734 -67307148 - L1MB5 LINE L1 -18 6156 5791 259 241 102 37 chr20 4846824 4846932 -67306950 + MER117 DNA MER1_type 81 195 -2 2461 199 0 0 chr20 4847507 4847925 -67305957 - MER47B DNA MER2_type 0 418 1 1934 151 13 10 chr20 4848945 4849080 -67304802 + AluSx SINE Alu 1 134 -178 2287 92 0 7 chr20 4849080 4849373 -67304509 + AluY SINE Alu 1 291 -20 1934 151 13 10 chr20 4849373 4849548 -67304334 + AluSx SINE Alu 134 312 0 238 309 89 16 chr20 4849957 4850080 -67303802 + MIR3 SINE MIR 12 143 -65 1260 254 40 27 chr20 4850184 4850266 -67303616 + L1MC4a LINE L1 4623 4702 -1444 1719 159 26 26 chr20 4850266 4850568 -67303314 + AluJb SINE Alu 1 302 -10 1260 254 40 27 chr20 4850568 4850841 -67303041 + L1MC4a LINE L1 4702 4986 -1160 2322 208 18 18 chr20 4850841 4851346 -67302536 + L1PA16 LINE L1 5657 6161 -5 1260 254 40 27 chr20 4851346 4851390 -67302492 + L1MC4a LINE L1 4986 5028 -1118 2342 95 7 0 chr20 4851634 4851940 -67301942 + AluSp SINE Alu 1 308 -5 2359 113 0 0 chr20 4852358 4852668 -67301214 - AluSx SINE Alu -2 310 1 234 205 145 24 chr20 4852673 4852756 -67301126 + MIR SINE MIR 61 153 -55 1760 130 23 0 chr20 4853987 4854249 -67299633 - AluSx SINE Alu -13 299 32 2379 106 3 3 chr20 4854749 4855061 -67298821 + AluSq SINE Alu 1 312 -1 184 250 0 0 chr20 4855153 4855197 -67298685 + MIR SINE MIR 61 104 -104 435 320 74 25 chr20 4855528 4855772 -67298110 + L1MC4a LINE L1 5391 5646 -2162 290 235 51 31 chr20 4855827 4855925 -67297957 + L1MC4a LINE L1 5862 5961 -1847 23 0 0 0 chr20 4856075 4856098 -67297784 + AT_rich Low_complexity Low_complexity 1 23 0 345 294 18 29 chr20 4856733 4856903 -67296979 + GA-rich Low_complexity Low_complexity 5 172 0 585 243 28 34 chr20 4858208 4858385 -67295497 + LTR16A1 LTR ERVL 282 457 0 1982 131 14 0 chr20 4858479 4858762 -67295120 - AluSx SINE Alu -25 287 1 198 254 18 0 chr20 4859326 4859381 -67294501 - L2 LINE L2 -1 3271 3216 314 318 170 35 chr20 4860234 4860727 -67293155 - L2 LINE L2 -782 2532 1942 1362 178 100 92 chr20 4860727 4861097 -67292785 + MLT1A2 LTR MaLR 1 373 -1 314 318 170 35 chr20 4861097 4861203 -67292679 - L2 LINE L2 -1372 1942 1852 1754 161 3 40 chr20 4862612 4862911 -67290971 - AluJo SINE Alu -24 288 1 276 262 159 16 chr20 4863358 4863484 -67290398 + MIR SINE MIR 2 145 -117 3686 147 2 2 chr20 4863558 4864131 -67289751 + L1PA16 LINE L1 5585 6157 -9 2242 122 3 6 chr20 4864133 4864444 -67289438 + AluSx SINE Alu 1 310 -2 1887 182 8 32 chr20 4865278 4865652 -67288230 - MLT1A1 LTR MaLR 0 365 1 207 271 0 0 chr20 4866166 4866214 -67287668 + L2 LINE L2 3217 3264 -8 1148 203 206 30 chr20 4866614 4866949 -67286933 + MSTD LTR MaLR 1 394 -2 296 209 0 0 chr20 4868204 4868271 -67285611 - L1MC1 LINE L1 -4 6329 6263 750 253 65 65 chr20 4868285 4868546 -67285336 - MER77 LTR ERV1 -291 314 54 1691 292 107 20 chr20 4868961 4870234 -67283648 + L1ME4a LINE L1 2877 4260 -1886 279 250 75 66 chr20 4870636 4870773 -67283109 + L1ME4a LINE L1 5858 5999 -122 2189 118 10 0 chr20 4870773 4871070 -67282812 + AluSx SINE Alu 5 304 -8 279 250 75 66 chr20 4871070 4871160 -67282722 + L1ME4a LINE L1 5999 6087 -34 270 224 0 0 chr20 4872449 4872498 -67281384 - MER91 DNA MER1_type -3 137 89 589 256 26 6 chr20 4872987 4873143 -67280739 - MIR SINE MIR 0 262 104 369 178 204 25 chr20 4873192 4873341 -67280541 + MLT1H LTR MaLR 53 310 -239 383 226 151 95 chr20 4873617 4873922 -67279960 - MER90 LTR ERV1 -219 356 35 274 30 0 0 chr20 4874425 4874458 -67279424 + MADE1 DNA Mariner 6 38 -42 251 266 32 21 chr20 4875192 4875286 -67278596 + HAL1b LINE L1 469 563 -785 388 85 34 0 chr20 4875292 4875351 -67278531 - MLT2C1 LTR ERVL 0 520 460 251 158 58 42 chr20 4875352 4875472 -67278410 + (TATAA)n Simple_repeat Simple_repeat 4 125 0 224 137 69 8 chr20 4875518 4875649 -67278233 + (TA)n Simple_repeat Simple_repeat 2 140 0 222 191 0 0 chr20 4875670 4875717 -67278165 + (TATG)n Simple_repeat Simple_repeat 2 48 0 1776 160 66 0 chr20 4875846 4876165 -67277717 - MLT2C1 LTR ERVL -57 340 1 1253 134 0 0 chr20 4876209 4876381 -67277501 + AluSp SINE Alu 134 305 -8 22 0 0 0 chr20 4876751 4876773 -67277109 + AT_rich Low_complexity Low_complexity 1 22 0 909 190 0 22 chr20 4876895 4877074 -67276808 + MER5B DNA MER1_type 4 178 0 214 242 0 16 chr20 4877222 4877284 -67276598 + MER5A DNA MER1_type 9 69 -120 3459 154 43 60 chr20 4877421 4878124 -67275758 + LTR8 LTR ERV1 1 691 0 322 380 68 30 chr20 4878225 4878442 -67275440 + L2 LINE L2 2850 3088 -184 5366 76 18 7 chr20 4878442 4879176 -67274706 + L1PA13 LINE L1 5419 6160 -3 322 380 68 30 chr20 4879176 4879324 -67274558 + L2 LINE L2 3088 3229 -43 1301 254 80 15 chr20 4880296 4880773 -67273109 + HAL1 LINE L1 1705 2212 -295 5382 136 12 16 chr20 4880836 4881682 -67272200 + MER4D LTR ERV1 62 903 0 377 289 122 31 chr20 4881682 4882402 -67271480 - L1M4 LINE L1 -748 5398 4613 267 165 66 11 chr20 4882432 4882523 -67271359 + (TTAAA)n Simple_repeat Simple_repeat 4 99 0 254 291 108 55 chr20 4882584 4882982 -67270900 + L1 LINE L1 2409 2827 -3319 277 296 49 0 chr20 4883027 4883108 -67270774 + MER5A DNA MER1_type 10 94 -95 928 322 61 70 chr20 4883179 4883311 -67270571 + L1 LINE L1 2932 3064 -3082 2319 75 7 0 chr20 4883311 4883637 -67270245 - AluSp SINE Alu 0 328 1 928 322 61 70 chr20 4883637 4884446 -67269436 + L1 LINE L1 3064 3868 -2278 2108 128 67 22 chr20 4884446 4884805 -67269077 + THE1C LTR MaLR 1 375 0 928 322 61 70 chr20 4884805 4884865 -67269017 + L1 LINE L1 3868 3927 -2219 408 334 52 30 chr20 4884905 4885309 -67268573 + L1 LINE L1 4067 4479 -1667 882 283 111 24 chr20 4885392 4885816 -67268066 + MLT1L LTR MaLR 155 615 0 351 269 155 56 chr20 4886142 4886588 -67267294 - L1M4 LINE L1 -2919 3227 2738 1432 286 46 21 chr20 4887338 4887814 -67266068 + LTR16C LTR ERVL 4 491 0 180 364 81 62 chr20 4888322 4888531 -67265351 + L2 LINE L2 3030 3242 -30 1144 240 86 26 chr20 4888952 4889796 -67264086 + L1MEc LINE L1 1951 2896 -3319 272 293 55 67 chr20 4892220 4892488 -67261394 + MIR3 SINE MIR 3 259 -3 228 259 129 24 chr20 4893549 4893634 -67260248 + L2 LINE L2 2885 2978 -294 189 289 0 0 chr20 4893741 4893793 -67260089 - L3b LINE CR1 -3 1580 1529 360 0 0 0 chr20 4893953 4893993 -67259889 + (CA)n Simple_repeat Simple_repeat 2 41 0 1170 151 16 0 chr20 4895120 4895306 -67258576 + AluSg/x SINE Alu 104 292 -20 818 179 68 6 chr20 4895373 4895535 -67258347 - LTR37B LTR ERV1 -289 179 8 506 317 85 55 chr20 4896133 4896590 -67257292 + L2 LINE L2 2817 3287 -26 184 297 0 68 chr20 4896743 4896817 -67257065 + L2 LINE L2 3204 3272 0 193 204 250 0 chr20 4897039 4897127 -67256755 + MIR3 SINE MIR 3 112 -96 5976 60 23 4 chr20 4897325 4898077 -67255805 - MER4E LTR ERV1 0 766 1 1827 147 18 0 chr20 4898161 4898447 -67255435 - AluJo SINE Alu -21 291 1 22 0 0 0 chr20 4898470 4898492 -67255390 + AT_rich Low_complexity Low_complexity 1 22 0 789 72 0 0 chr20 4898492 4898589 -67255293 - L1PA6 LINE L1 -7 6147 6051 5094 174 38 35 chr20 4899342 4900518 -67253364 + L1MA9 LINE L1 5127 6312 0 22 56 0 0 chr20 4900644 4900680 -67253202 + AT_rich Low_complexity Low_complexity 1 36 0 208 250 19 0 chr20 4900890 4900942 -67252940 + (TG)n Simple_repeat Simple_repeat 2 54 0 584 274 150 0 chr20 4901740 4901893 -67251989 - MER5A DNA MER1_type 0 189 14 255 303 68 68 chr20 4902236 4902398 -67251484 + MIR SINE MIR 31 192 -70 280 252 0 103 chr20 4902829 4902936 -67250946 + MER117 DNA MER1_type 2 97 -100 189 188 0 83 chr20 4903238 4903286 -67250596 - L2 LINE L2 -18 3295 3252 417 109 0 0 chr20 4903747 4903811 -67250071 + (T)n Simple_repeat Simple_repeat 1 64 0 240 335 36 85 chr20 4904240 4904712 -67249170 + L2 LINE L2 2817 3265 -7 1699 251 97 40 chr20 4904764 4905446 -67248436 - MER21B LTR ERV1 -130 733 13 729 252 34 101 chr20 4905526 4905970 -67247912 + L1ME4a LINE L1 5491 5904 -217 329 193 165 0 chr20 4905974 4906083 -67247799 + L1ME4a LINE L1 5993 6119 -2 3503 211 62 16 chr20 4906839 4907693 -67246189 + MER97a DNA MER1_type 2 894 0 378 279 93 31 chr20 4907878 4908039 -67245843 + MIR SINE MIR 16 186 -76 390 326 31 0 chr20 4908788 4908917 -67244965 - MER94 DNA DNA -1 133 1 2115 113 3 35 chr20 4909013 4909323 -67244559 + AluSx SINE Alu 1 300 -12 322 304 45 0 chr20 4909946 4910058 -67243824 - MER103 DNA DNA -47 119 3 558 229 16 100 chr20 4911098 4911222 -67242660 - MLT1H LTR MaLR -25 406 273 243 0 0 0 chr20 4911222 4911249 -67242633 + (CTGGGG)n Simple_repeat Simple_repeat 3 29 0 558 229 16 100 chr20 4911249 4911547 -67242335 - MLT1H LTR MaLR -158 273 1 1149 203 0 5 chr20 4913150 4913357 -67240525 + MER3 DNA MER1_type 2 207 -2 1543 231 73 86 chr20 4914660 4915259 -67238623 - MER77 LTR ERV1 -1 604 41 365 314 123 8 chr20 4915264 4915516 -67238366 + L1ME3 LINE L1 4960 5240 -906 236 186 23 0 chr20 4915605 4915648 -67238234 + L1P5 LINE L1 5529 5572 -584 379 316 204 16 chr20 4915718 4916022 -67237860 + L1MC4a LINE L1 5626 5986 -1822 1707 291 53 17 chr20 4916196 4916797 -67237085 + MLT2E LTR ERVL 6 628 0 231 158 50 0 chr20 4916813 4916926 -67236956 + (TA)n Simple_repeat Simple_repeat 2 123 -4 186 71 0 0 chr20 4916926 4916954 -67236928 + (TG)n Simple_repeat Simple_repeat 1 28 0 231 158 50 0 chr20 4916954 4916960 -67236922 + (TA)n Simple_repeat Simple_repeat 123 127 0 39598 81 6 8 chr20 4917428 4923579 -67230303 - L1PA6 LINE L1 -3 6151 11 302 246 220 34 chr20 4923601 4923719 -67230163 - MIR SINE MIR -70 192 53 314 267 75 54 chr20 4923975 4924223 -67229659 - MLT1H LTR MaLR -137 272 19 2202 241 72 16 chr20 4924390 4924946 -67228936 - MLT1G1 LTR MaLR -8 587 1 469 266 83 52 chr20 4925315 4925507 -67228375 - MIR SINE MIR -6 256 59 723 210 14 0 chr20 4925914 4926052 -67227830 + MER5B DNA MER1_type 39 178 0 314 201 93 50 chr20 4926194 4926333 -67227549 + L2 LINE L2 3076 3220 -93 287 297 54 0 chr20 4926335 4926409 -67227473 - MER91C DNA MER1_type -32 108 31 437 283 38 0 chr20 4926415 4926521 -67227361 + L2 LINE L2 3203 3312 -1 336 119 0 0 chr20 4926606 4926665 -67227217 + (CAT)n Simple_repeat Simple_repeat 3 61 0 291 309 12 12 chr20 4926802 4926883 -67226999 + MIR SINE MIR 29 109 -153 325 173 58 10 chr20 4926948 4927046 -67226836 + L1ME3 LINE L1 5367 5478 -764 802 271 123 17 chr20 4927049 4927482 -67226400 - MLT1J2 LTR MaLR 0 450 1 421 338 82 17 chr20 4927483 4927900 -67225982 + L1ME3 LINE L1 5486 5929 -233 201 231 0 0 chr20 4928002 4928041 -67225841 + GA-rich Low_complexity Low_complexity 3 41 0 2897 179 9 38 chr20 4928113 4928693 -67225189 + L1MB4 LINE L1 5618 6180 0 429 253 126 44 chr20 4929719 4929901 -67223981 + MIR SINE MIR 63 259 -3 1965 208 177 31 chr20 4930066 4930682 -67223200 - MER21B LTR ERV1 -124 739 34 197 284 45 15 chr20 4930818 4930885 -67222997 + MIR3 SINE MIR 114 182 -26 2872 198 109 28 chr20 4931051 4931840 -67222042 - L1ME3 LINE L1 0 6162 5310 212 302 0 31 chr20 4931880 4931976 -67221906 - MIR SINE MIR -70 192 100 1653 236 106 6 chr20 4932794 4933341 -67220541 - L1ME3 LINE L1 -93 6069 5468 310 229 51 76 chr20 4933938 4934056 -67219826 + L2 LINE L2 3158 3272 0 296 265 102 65 chr20 4934262 4934507 -67219375 + L2 LINE L2 2288 2541 -773 230 343 0 0 chr20 4934483 4934553 -67219329 - L2 LINE L2 0 3313 3244 * 205 314 0 0 chr20 4935441 4935492 -67218390 + polypyrimidine Low_complexity Low_complexity 1 51 0 467 255 113 14 chr20 4936618 4936759 -67217123 - MIR SINE MIR -103 159 5 283 219 135 0 chr20 4936791 4936887 -67216995 + MIR SINE MIR 146 254 -8 180 182 0 0 chr20 4936928 4936972 -67216910 + GA-rich Low_complexity Low_complexity 3 46 0 1947 148 3 16 chr20 4937821 4938126 -67215756 - AluJb SINE Alu -11 301 1 407 200 200 21 chr20 4938272 4938412 -67215470 - MIR SINE MIR -14 248 84 2475 74 0 0 chr20 4939306 4939605 -67214277 - AluSg SINE Alu -11 299 1 510 230 146 6 chr20 4939605 4939783 -67214099 - Charlie4a DNA MER1_type -8 500 298 752 242 204 4 chr20 4939783 4940052 -67213830 - MER5C DNA MER1_type 0 324 2 899 231 60 40 chr20 4940054 4940352 -67213530 - Charlie4a DNA MER1_type -204 304 1 270 336 92 0 chr20 4940812 4940931 -67212951 - MIR SINE MIR -15 247 118 2580 228 3 17 chr20 4942067 4942770 -67211112 + L1MB5 LINE L1 4068 4760 -1386 3733 175 64 41 chr20 4942795 4944302 -67209580 + MER52A LTR ERV1 1 1755 0 1810 198 18 11 chr20 4944302 4944751 -67209131 + L1MB5 LINE L1 4773 5224 -922 277 40 60 20 chr20 4944751 4944801 -67209081 + T-rich Low_complexity Low_complexity 1 52 0 2569 43 0 0 chr20 4944801 4945126 -67208756 - L1PA4 LINE L1 -24 6131 5807 2970 205 28 2 chr20 4945129 4946027 -67207855 + L1MB5 LINE L1 5219 6166 -8 745 239 72 5 chr20 4946133 4946342 -67207540 - Charlie4 DNA MER1_type -1666 295 73 1060 228 9 9 chr20 4946490 4946714 -67207168 + MER58A DNA MER1_type 1 224 0 25 0 0 0 chr20 4946878 4946903 -67206979 + AT_rich Low_complexity Low_complexity 1 25 0 273 324 30 0 chr20 4946920 4947055 -67206827 + L1MDa LINE L1 34 618 -5912 913 235 71 45 chr20 4947280 4947310 -67206572 - MLT2B3 LTR ERVL -10 544 516 531 0 0 0 chr20 4947310 4947369 -67206513 + (TAGA)n Simple_repeat Simple_repeat 2 60 0 913 235 71 45 chr20 4947369 4947606 -67206276 - MLT2B3 LTR ERVL -38 516 270 546 235 38 0 chr20 4947758 4947890 -67205992 + MLT1A2 LTR MaLR 238 374 0 2543 243 41 28 chr20 4947890 4948691 -67205191 + L1ME1 LINE L1 5338 6149 -17 1779 214 31 31 chr20 4948728 4949182 -67204700 + L1MA9 LINE L1 8 461 -6569 2444 219 5 21 chr20 4949230 4949886 -67203996 + L1MA9 LINE L1 1829 2473 -4564 * 8805 174 57 32 chr20 4949877 4952505 -67201377 + L1MA9 LINE L1 4075 6794 -478 465 66 0 0 chr20 4952505 4952566 -67201316 + (CA)n Simple_repeat Simple_repeat 1 61 0 8805 174 57 32 chr20 4952566 4953043 -67200839 + L1MA9 LINE L1 6794 7258 -14 2007 120 29 0 chr20 4953165 4953474 -67200408 + AluSx SINE Alu 1 317 0 226 366 114 13 chr20 4953609 4953836 -67200046 + L2 LINE L2 2804 3053 -219 3022 92 2 31 chr20 4954372 4954828 -67199054 + L1PA13 LINE L1 5702 6144 -19 277 345 45 0 chr20 4954837 4954947 -67198935 - MIR SINE MIR -57 151 37 193 150 0 50 chr20 4954961 4955021 -67198861 + (TTTC)n Simple_repeat Simple_repeat 3 59 0 257 320 87 0 chr20 4955832 4955935 -67197947 - MIR SINE MIR -32 230 119 2274 190 66 34 chr20 4955966 4956418 -67197464 - L1MB7 LINE L1 -277 5907 5471 1888 181 3 0 chr20 4956418 4956716 -67197166 - AluJo SINE Alu -13 299 1 2274 190 66 34 chr20 4956716 4956842 -67197040 - L1MB7 LINE L1 -713 5471 5351 2157 112 7 0 chr20 4956842 4957137 -67196745 - AluSx SINE Alu -15 297 1 2274 190 66 34 chr20 4957137 4957227 -67196655 - L1MB7 LINE L1 -833 5351 5207 862 196 61 17 chr20 4957224 4957454 -67196428 + L1MB7 LINE L1 5940 6179 -5 * 27 0 0 0 chr20 4957694 4957721 -67196161 + AT_rich Low_complexity Low_complexity 1 27 0 8644 168 19 23 chr20 4957728 4959929 -67193953 + L1MA9 LINE L1 3471 5680 -632 2257 110 0 0 chr20 4959929 4960229 -67193653 + AluSx SINE Alu 1 300 -12 2212 131 0 0 chr20 4960229 4960541 -67193341 + AluSx SINE Alu 1 312 0 8644 168 19 23 chr20 4960541 4960941 -67192941 + L1MA9 LINE L1 5678 6064 -248 264 105 0 0 chr20 4960941 4960979 -67192903 + LTR16C LTR ERVL 454 491 0 250 255 51 31 chr20 4961787 4961885 -67191997 - LTR67 LTR ERVL -47 510 411 1118 288 33 40 chr20 4962410 4962833 -67191049 + LTR16C LTR ERVL 51 470 -21 514 269 35 46 chr20 4963106 4963303 -67190579 - ERVL LTR ERVL -1106 4658 4464 1144 344 44 24 chr20 4963683 4964552 -67189330 - ERVL LTR ERVL -1716 3938 3053 24 53 0 0 chr20 4964720 4964758 -67189124 + AT_rich Low_complexity Low_complexity 1 38 0 447 244 23 54 chr20 4964902 4965123 -67188759 - L1M4 LINE L1 -2593 3553 3340 4312 166 35 14 chr20 4965124 4965292 -67188590 - L1MA10 LINE L1 -2 6332 6169 315 0 0 0 chr20 4965292 4965327 -67188555 + (TG)n Simple_repeat Simple_repeat 1 35 0 4312 166 35 14 chr20 4965327 4966016 -67187866 - L1MA10 LINE L1 -165 6169 5457 6215 211 18 9 chr20 4966016 4967385 -67186497 - L1MA10 LINE L1 -2106 4040 2655 1499 104 45 0 chr20 4967385 4967605 -67186277 + MER30 DNA MER1_type 1 230 0 6215 211 18 9 chr20 4967605 4967702 -67186180 - L1MA10 LINE L1 -3491 2655 2560 1496 221 63 49 chr20 4967709 4967924 -67185958 - MER74A LTR ERVL 0 558 348 420 97 0 0 chr20 4967924 4967986 -67185896 + (TG)n Simple_repeat Simple_repeat 1 62 0 1496 221 63 49 chr20 4967986 4968264 -67185618 - MER74A LTR ERVL -210 348 58 345 198 99 12 chr20 4968280 4968361 -67185521 - MER74A LTR ERVL -470 88 1 265 216 9 54 chr20 4968391 4968502 -67185380 - L1M4 LINE L1 -2846 3300 3195 483 270 69 29 chr20 4968757 4968931 -67184951 + MER5A DNA MER1_type 6 186 -3 624 275 11 11 chr20 4970049 4970227 -67183655 - MIR SINE MIR 0 262 85 1823 231 59 12 chr20 4970227 4970733 -67183149 - MLT1H LTR MaLR 0 549 20 216 0 0 0 chr20 4970736 4970760 -67183122 + (T)n Simple_repeat Simple_repeat 1 24 0 351 366 0 8 chr20 4971719 4971850 -67182032 + MIR3 SINE MIR 64 193 -15 447 218 0 0 chr20 4971850 4971951 -67181931 + CT-rich Low_complexity Low_complexity 1 101 0 1155 81 0 27 chr20 4971951 4972136 -67181746 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1361 159 0 17 chr20 4972185 4972417 -67181465 - AluJb SINE Alu -83 229 2 338 197 26 0 chr20 4972760 4972836 -67181046 + Charlie2 DNA MER1_type 67 144 -2638 21 89 0 0 chr20 4972916 4972972 -67180910 + AT_rich Low_complexity Low_complexity 1 56 0 444 280 188 14 chr20 4972986 4973268 -67180614 + Charlie2 DNA MER1_type 251 581 -2201 359 337 88 0 chr20 4973270 4973451 -67180431 + Charlie2b DNA MER1_type 474 670 -2112 4202 202 53 31 chr20 4973520 4974844 -67179038 + Charlie2a DNA MER1_type 1466 2818 -44 433 291 9 1 chr20 4976262 4976389 -67177493 + MIR SINE MIR 31 157 -69 573 269 164 39 chr20 4977989 4978483 -67175399 + L1MC/D LINE L1 2687 3242 -2904 338 225 11 56 chr20 4978570 4978659 -67175223 + MLT1J LTR MaLR 104 188 -323 262 273 31 37 chr20 4978665 4978826 -67175056 + L1MC/D LINE L1 5327 5486 -2322 632 262 61 0 chr20 4978833 4978997 -67174885 - MIR SINE MIR 0 262 89 472 306 86 4 chr20 4979000 4979232 -67174650 + L1MC/D LINE L1 5487 5737 -2071 5604 206 52 11 chr20 4979352 4981777 -67172105 + L1MC3 LINE L1 4024 5403 -743 339 46 11 218 chr20 4981802 4981863 -67172019 + L1MC3 LINE L1 6882 6922 -863 3803 169 35 3 chr20 4981863 4982579 -67171303 - L1MD1 LINE L1 0 6242 5504 339 46 11 218 chr20 4982579 4982604 -67171278 + L1MC3 LINE L1 6922 6950 -835 379 307 24 0 chr20 4982609 4982736 -67171146 - LTR33 LTR ERVL -391 130 1 1532 259 64 74 chr20 4983165 4983851 -67170031 - MER21B LTR ERV1 -150 713 35 268 270 119 16 chr20 4985300 4985426 -67168456 - L2 LINE L2 0 3272 3134 629 239 103 97 chr20 4985898 4986237 -67167645 - MLT1H LTR MaLR 0 549 209 1500 254 17 0 chr20 4986240 4986595 -67167287 + MLT1E2-int LTR MaLR 246 606 -765 928 233 35 170 chr20 4986828 4987494 -67166388 + MLT1E2-int LTR MaLR 692 1267 -104 690 167 25 0 chr20 4987510 4987630 -67166252 - L1MB1 LINE L1 0 6168 6046 3431 150 43 29 chr20 4987630 4987765 -67166117 + L1MB1 LINE L1 5352 5484 -684 2186 118 0 16 chr20 4987765 4988069 -67165813 + AluSx SINE Alu 1 299 -13 3431 150 43 29 chr20 4988069 4988588 -67165294 + L1MB1 LINE L1 5484 6015 -153 486 236 49 0 chr20 4988593 4988716 -67165166 + MLT1E2-int LTR MaLR 1243 1371 0 2228 210 87 19 chr20 4988798 4989337 -67164545 + MLT1E2 LTR MaLR 51 626 0 717 182 135 0 chr20 4989337 4989485 -67164397 - MLT1H LTR MaLR -341 208 41 2019 165 91 10 chr20 4990688 4991082 -67162800 - MSTB LTR MaLR 0 426 1 1248 117 12 0 chr20 4992005 4992176 -67161706 - AluSg/x SINE Alu -16 296 124 243 237 92 13 chr20 4992232 4992308 -67161574 - MLT1H LTR MaLR -15 580 499 * 584 279 49 102 chr20 4992304 4992607 -67161275 - MLT1H LTR MaLR -195 354 70 2457 177 19 2 chr20 4992607 4993026 -67160856 - MSTB LTR MaLR 0 426 1 584 279 49 102 chr20 4993026 4993066 -67160816 - MLT1H LTR MaLR -479 70 29 276 312 85 38 chr20 4993115 4993434 -67160448 - L2 LINE L2 -251 3062 2719 604 314 108 23 chr20 4993449 4993876 -67160006 - MLT1L LTR MaLR -14 601 139 403 237 69 15 chr20 4993974 4994105 -67159777 - MLT1L LTR MaLR -410 139 2 183 100 0 0 chr20 4994133 4994163 -67159719 + (CA)n Simple_repeat Simple_repeat 2 31 0 1198 283 57 31 chr20 4994257 4994573 -67159309 - MLT1D LTR MaLR 0 505 170 1305 118 62 153 chr20 4994573 4994912 -67158970 - AluYb8 SINE Alu 0 308 1 1198 283 57 31 chr20 4994912 4995083 -67158799 - MLT1D LTR MaLR -335 170 5 199 348 61 17 chr20 4996095 4996210 -67157672 + MIR SINE MIR 34 153 -55 842 243 82 12 chr20 4996219 4996462 -67157420 + Charlie4a DNA MER1_type 4 263 -245 750 150 50 0 chr20 4996470 4996590 -67157292 + FLAM_C SINE Alu 2 127 -16 437 233 61 22 chr20 4996607 4996787 -67157095 + Charlie4a DNA MER1_type 253 439 -69 2294 120 0 0 chr20 4996834 4997143 -67156739 + AluSx SINE Alu 1 309 -3 311 275 44 9 chr20 4997226 4997341 -67156541 - MIR SINE MIR -87 121 2 679 261 124 0 chr20 4997369 4997603 -67156279 + L2 LINE L2 1441 1703 -1611 1674 206 102 80 chr20 4997608 4998077 -67155805 - MLT1F LTR MaLR -2 540 56 2262 119 51 20 chr20 4998077 4998430 -67155452 + THE1B LTR MaLR 1 364 0 1674 206 102 80 chr20 4998430 4998488 -67155394 - MLT1F LTR MaLR -486 56 1 1239 248 65 3 chr20 4998488 4998827 -67155055 + L2 LINE L2 1708 2067 -1247 282 283 91 36 chr20 4998887 4999106 -67154776 + HAL1 LINE L1 2014 2244 -263 416 194 32 0 chr20 4999121 4999214 -67154668 + HAL1 LINE L1 2296 2391 -116 747 277 130 36 chr20 4999736 5000606 -67153276 + L1MEc LINE L1 805 1651 -4564 567 108 0 0 chr20 5001828 5001921 -67151961 + (TTCC)n Simple_repeat Simple_repeat 2 94 0 2097 127 0 10 chr20 5001921 5002221 -67151661 - AluSx SINE Alu -15 297 1 2390 99 0 0 chr20 5002376 5002670 -67151212 + AluY SINE Alu 1 294 -17 286 252 153 0 chr20 5003314 5003445 -67150437 - L2 LINE L2 -2 3311 3161 363 305 163 17 chr20 5003709 5003942 -67149940 + LTR16C LTR ERVL 223 489 -2 585 355 59 20 chr20 5004007 5004060 -67149822 - L2 LINE L2 -199 3073 3024 2284 112 0 0 chr20 5004060 5004365 -67149517 + AluSx SINE Alu 1 305 -7 585 355 59 20 chr20 5004365 5004878 -67149004 - L2 LINE L2 -248 3024 2490 231 218 0 0 chr20 5005153 5005208 -67148674 + (ATG)n Simple_repeat Simple_repeat 2 56 0 2016 93 0 35 chr20 5005318 5005621 -67148261 + L1PA13 LINE L1 5862 6155 -8 2221 116 0 0 chr20 5005621 5005915 -67147967 - AluSx SINE Alu -18 294 1 206 301 19 78 chr20 5005967 5006070 -67147812 - L2 LINE L2 -621 2693 2597 888 267 94 1 chr20 5006076 5006500 -67147382 + LTR16C LTR ERVL 1 491 0 2348 194 67 9 chr20 5006828 5007364 -67146518 - MLT1F1 LTR MaLR 0 567 1 678 190 0 0 chr20 5007448 5007564 -67146318 + FRAM SINE Alu 41 156 -20 416 180 0 11 chr20 5007569 5007658 -67146224 + GA-rich Low_complexity Low_complexity 2 89 0 23 0 0 0 chr20 5008100 5008123 -67145759 + AT_rich Low_complexity Low_complexity 1 23 0 1481 240 63 30 chr20 5009102 5009424 -67144458 + Charlie4a DNA MER1_type 2 347 -1614 2155 116 0 14 chr20 5009424 5009718 -67144164 - AluSx SINE Alu -22 290 1 1481 240 63 30 chr20 5009718 5009886 -67143996 + Charlie4a DNA MER1_type 347 508 0 340 302 98 33 chr20 5010312 5010446 -67143436 - L1ME4a LINE L1 -161 5960 5836 2321 65 27 14 chr20 5010446 5010739 -67143143 + AluY SINE Alu 1 297 -14 340 302 98 33 chr20 5010739 5010849 -67143033 - L1ME4a LINE L1 -285 5836 5700 2296 117 0 0 chr20 5010849 5011147 -67142735 + AluSx SINE Alu 1 298 -14 252 232 87 0 chr20 5011189 5011258 -67142624 - MER116 DNA Mariner 0 80 6 338 310 86 76 chr20 5011275 5011975 -67141907 - L1ME4a LINE L1 -1316 4830 4124 1854 161 22 12 chr20 5012044 5012368 -67141514 + MLT1A1 LTR MaLR 39 365 0 22 35 0 0 chr20 5012577 5012606 -67141276 + AT_rich Low_complexity Low_complexity 1 29 0 305 265 68 0 chr20 5014811 5014928 -67138954 + MIR SINE MIR 100 224 -38 252 290 21 21 chr20 5014997 5015090 -67138792 + LTR16C LTR ERVL 79 171 -320 258 154 0 58 chr20 5015112 5015164 -67138718 - MLT2B1 LTR ERVL -8 512 464 249 246 0 0 chr20 5015166 5015231 -67138651 + (TATG)n Simple_repeat Simple_repeat 4 68 0 1339 206 148 35 chr20 5015237 5015668 -67138214 - MLT2B1 LTR ERVL -40 480 1 265 309 36 0 chr20 5015737 5015847 -67138035 + LTR16C LTR ERVL 349 462 -29 375 271 19 94 chr20 5017268 5017353 -67136529 - L1ME3A LINE L1 -234 5936 5846 2267 92 0 17 chr20 5017353 5017648 -67136234 - AluSx SINE Alu -20 292 3 375 271 19 94 chr20 5017648 5017828 -67136054 - L1ME3A LINE L1 -324 5846 5691 24 0 0 0 chr20 5017977 5018001 -67135881 + AT_rich Low_complexity Low_complexity 1 24 0 292 267 37 84 chr20 5018203 5018394 -67135488 - L1ME4a LINE L1 -3289 2857 2676 5392 119 19 57 chr20 5018400 5019475 -67134407 + L1PA12 LINE L1 5130 6168 0 181 163 41 0 chr20 5019509 5019558 -67134324 + CT-rich Low_complexity Low_complexity 2 52 0 2195 121 16 0 chr20 5019684 5019991 -67133891 - AluSx SINE Alu 0 312 1 370 340 111 17 chr20 5020038 5020335 -67133547 - L1ME4a LINE L1 -3600 2546 2222 5777 63 7 0 chr20 5020569 5021284 -67132598 - L1PA8 LINE L1 -1 6171 5452 267 182 105 127 chr20 5021678 5021859 -67132023 + MER104 DNA Tc2 1 177 -3 535 283 93 20 chr20 5021910 5022304 -67131578 - L1MDa LINE L1 -742 2159 1636 2220 115 7 0 chr20 5022514 5022809 -67131073 - AluSx SINE Alu -15 297 1 1172 188 43 59 chr20 5024398 5024701 -67129181 + AluJo SINE Alu 1 298 -4 276 119 0 0 chr20 5025866 5025908 -67127974 - AluJo SINE Alu -11 291 250 1215 185 4 89 chr20 5025928 5026209 -67127673 - AluJo SINE Alu -53 259 3 256 312 102 62 chr20 5026412 5026863 -67127019 - L1M4 LINE L1 -1003 5143 4712 1176 142 49 0 chr20 5026863 5027068 -67126814 - L1MA7 LINE L1 0 6291 6077 256 312 102 62 chr20 5027068 5027689 -67126193 - L1M4 LINE L1 -1434 4712 4027 824 176 149 5 chr20 5027818 5028006 -67125876 - AluJo SINE Alu -11 301 87 231 321 149 15 chr20 5028101 5028235 -67125647 + MIR SINE MIR 105 256 -6 2225 105 0 0 chr20 5028262 5028591 -67125291 - AluSq SINE Alu 0 329 1 447 104 15 0 chr20 5028633 5028700 -67125182 - MER41A LTR ERV1 -88 466 399 22 70 0 0 chr20 5028796 5028839 -67125043 + AT_rich Low_complexity Low_complexity 1 43 0 1455 101 22 40 chr20 5029217 5029445 -67124437 + AluSx SINE Alu 2 225 -87 689 229 108 54 chr20 5029528 5029825 -67124057 + L2 LINE L2 2995 3307 -6 351 213 0 0 chr20 5030087 5030167 -67123715 + (CA)n Simple_repeat Simple_repeat 1 80 0 637 235 117 5 chr20 5030383 5030596 -67123286 - MER115 DNA AcHobo 0 693 457 754 274 36 15 chr20 5030645 5030919 -67122963 - MER115 DNA AcHobo -322 371 92 699 156 0 0 chr20 5031534 5031643 -67122239 + L1MB5 LINE L1 6065 6173 -1 2234 132 3 0 chr20 5031651 5031961 -67121921 + AluSx SINE Alu 1 311 -1 1133 68 28 6 chr20 5031994 5032170 -67121712 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 211 122 24 0 chr20 5033176 5033217 -67120665 - L2 LINE L2 -556 2758 2717 846 228 53 0 chr20 5033229 5033435 -67120447 + MIR SINE MIR 12 228 -34 225 167 39 26 chr20 5033984 5034062 -67119820 + GA-rich Low_complexity Low_complexity 1 79 0 792 263 24 0 chr20 5034080 5034293 -67119589 + MIR SINE MIR 12 229 -33 2155 77 7 28 chr20 5034599 5034886 -67118996 + AluSx SINE Alu 1 281 -31 450 0 0 0 chr20 5034891 5034941 -67118941 + (TAAA)n Simple_repeat Simple_repeat 2 51 0 271 32 0 0 chr20 5035539 5035570 -67118312 - L1M2 LINE L1 -425 5887 5857 278 149 0 0 chr20 5035571 5035618 -67118264 + L1MA7 LINE L1 6239 6285 -6 180 0 0 0 chr20 5035618 5035638 -67118244 + (CCA)n Simple_repeat Simple_repeat 3 22 0 203 255 0 0 chr20 5036432 5036479 -67117403 + L2 LINE L2 3252 3298 -15 431 192 35 17 chr20 5036880 5036989 -67116893 - MLT1C LTR MaLR -337 130 18 1064 210 70 18 chr20 5037391 5037619 -67116263 - MLT1C LTR MaLR 0 467 228 2934 133 13 49 chr20 5037619 5037937 -67115945 - MER39B LTR ERV1 0 653 360 2781 91 3 5 chr20 5037937 5038310 -67115572 - THE1C LTR MaLR 0 375 4 2934 133 13 49 chr20 5038310 5038524 -67115358 - MER39B LTR ERV1 -293 360 140 1053 166 29 46 chr20 5038562 5038803 -67115079 - MLT1C LTR MaLR -230 237 1 829 254 57 32 chr20 5038925 5039240 -67114642 + L1MDa LINE L1 18 340 -6200 687 233 17 80 chr20 5039368 5039589 -67114293 + L1MDa LINE L1 843 1043 -5500 2085 122 3 25 chr20 5039589 5039909 -67113973 + AluSq SINE Alu 1 313 0 687 233 17 80 chr20 5039909 5039975 -67113907 + L1MDa LINE L1 1043 1112 -5431 1051 151 32 21 chr20 5039976 5040162 -67113720 - MER21B LTR ERV1 -14 849 662 2651 110 75 54 chr20 5040162 5040645 -67113237 - LTR26B LTR ERV1 -1 530 38 33065 103 15 60 chr20 5040662 5044719 -67109163 - L1PA7 LINE L1 0 6154 2498 2549 64 0 10 chr20 5044719 5045030 -67108852 - AluY SINE Alu -3 308 1 33065 103 15 60 chr20 5045030 5047412 -67106470 - L1PA7 LINE L1 -3656 2498 12 477 114 0 14 chr20 5047432 5047502 -67106380 - LTR26E LTR ERV1 -553 69 1 * 2484 216 68 22 chr20 5047502 5048047 -67105835 - MER21B LTR ERV1 -197 666 97 284 198 119 89 chr20 5048157 5048258 -67105624 - MER21B LTR ERV1 -758 105 2 3535 210 94 66 chr20 5048273 5048602 -67105280 + L1MDa LINE L1 1259 1577 -4963 1902 169 0 3 chr20 5048602 5048915 -67104967 + AluJb SINE Alu 1 312 0 3535 210 94 66 chr20 5048915 5048933 -67104949 + L1MDa LINE L1 1577 1593 -4947 2410 97 3 0 chr20 5048933 5049242 -67104640 + AluSx SINE Alu 1 310 -2 3535 210 94 66 chr20 5049242 5050184 -67103698 + L1MDa LINE L1 1593 2586 -3954 1327 127 131 23 chr20 5050172 5050431 -67103451 + L1MA6 LINE L1 6014 6300 0 * 1470 232 36 27 chr20 5050402 5050846 -67103036 + L1MDa LINE L1 2539 2986 -3554 818 164 0 8 chr20 5050853 5050981 -67102901 + FLAM_C SINE Alu 1 127 -16 26 0 0 0 chr20 5051543 5051569 -67102313 + AT_rich Low_complexity Low_complexity 1 26 0 954 163 41 131 chr20 5051576 5051728 -67102154 - L1MA9 LINE L1 -1 6311 6202 303 28 0 0 chr20 5051728 5051764 -67102118 + (TG)n Simple_repeat Simple_repeat 1 36 0 954 163 41 131 chr20 5051764 5051931 -67101951 - L1MA9 LINE L1 -110 6202 6021 1108 134 18 55 chr20 5051931 5051979 -67101903 + L1 LINE L1 5086 5134 -1012 1672 187 14 14 chr20 5051979 5052273 -67101609 + AluJb SINE Alu 1 294 -18 1108 134 18 55 chr20 5052273 5052441 -67101441 + L1 LINE L1 5134 5294 -852 4205 131 43 49 chr20 5052842 5053631 -67100251 + LTR1 LTR ERV1 1 784 -1 235 235 144 15 chr20 5053894 5054026 -67099856 + L1M4 LINE L1 4472 4620 -1526 2151 98 4 0 chr20 5054130 5054405 -67099477 + AluSx SINE Alu 1 276 -36 193 0 61 30 chr20 5054639 5054672 -67099210 + (CAAAA)n Simple_repeat Simple_repeat 5 38 0 729 151 22 22 chr20 5055627 5055766 -67098116 - MER5A DNA MER1_type -23 166 28 429 248 0 9 chr20 5055797 5055906 -67097976 - MER5B DNA MER1_type -23 155 48 2135 112 53 36 chr20 5055927 5056285 -67097597 + THE1B LTR MaLR 1 364 0 3445 128 0 4 chr20 5056928 5057427 -67096455 - LOR1a LTR ERV1 0 497 1 574 271 135 10 chr20 5057463 5057766 -67096116 + L2 LINE L2 2875 3215 -98 1942 154 101 97 chr20 5057806 5058468 -67095414 + MER4A LTR ERV1 1 872 0 368 263 11 0 chr20 5059109 5059204 -67094678 - MER5A DNA MER1_type -84 105 10 2585 64 0 0 chr20 5060243 5060539 -67093343 + AluY SINE Alu 1 296 -15 2326 111 0 3 chr20 5061392 5061698 -67092184 - AluSq SINE Alu -8 305 1 350 286 153 20 chr20 5061901 5062097 -67091785 - HAL1 LINE L1 -5 2502 2281 579 266 47 18 chr20 5062139 5062417 -67091465 - HAL1 LINE L1 -328 2179 1894 243 233 35 95 chr20 5062590 5062706 -67091176 - Charlie8 DNA MER1_type -2217 200 92 2306 110 0 0 chr20 5062864 5063164 -67090718 + AluSx SINE Alu 1 300 -12 1631 238 36 44 chr20 5063792 5063839 -67090043 - LTR16C LTR ERVL -1 490 444 2327 107 0 0 chr20 5063839 5064149 -67089733 + AluSg SINE Alu 1 310 0 1631 238 36 44 chr20 5064149 5064551 -67089331 - LTR16C LTR ERVL -47 444 45 778 175 29 6 chr20 5064693 5064850 -67089032 - MLT1D LTR MaLR -361 144 1 817 160 0 0 chr20 5065963 5066094 -67087788 + FLAM_A SINE Alu 1 131 -2 1869 162 14 0 chr20 5066183 5066512 -67087370 - AluJb SINE Alu 0 333 1 285 206 19 136 chr20 5066753 5066908 -67086974 + L2 LINE L2 2931 3067 -246 429 234 14 0 chr20 5066950 5067054 -67086828 - L1ME2 LINE L1 -3 6163 6053 3912 177 29 4 chr20 5067061 5067762 -67086120 - MER44D DNA MER2_type -3 602 13 376 237 148 15 chr20 5068864 5068999 -67084883 + MIR SINE MIR 36 188 -74 15137 194 47 11 chr20 5069036 5071609 -67082273 + L1PB1 LINE L1 6 2485 -4382 2251 116 0 31 chr20 5071609 5071929 -67081953 + AluSx SINE Alu 1 310 -2 15137 194 47 11 chr20 5071929 5073856 -67080026 + L1PB1 LINE L1 2485 4341 -2526 2159 112 0 3 chr20 5073856 5074141 -67079741 + AluSq SINE Alu 1 284 -29 668 12 0 12 chr20 5074144 5074226 -67079656 + (GAAA)n Simple_repeat Simple_repeat 1 81 0 15137 194 47 11 chr20 5074226 5076136 -67077746 + L1PB1 LINE L1 4342 6814 -53 2394 89 3 0 chr20 5076136 5076440 -67077442 + AluSg SINE Alu 1 305 -5 15137 194 47 11 chr20 5076440 5076475 -67077407 + L1PB1 LINE L1 6814 6846 -21 620 169 8 23 chr20 5076521 5076651 -67077231 - FRAM SINE Alu -6 170 43 524 174 0 11 chr20 5076657 5076749 -67077133 - AluJ/FLAM SINE Alu -218 94 4 225 0 0 0 chr20 5076894 5076919 -67076963 + (A)n Simple_repeat Simple_repeat 1 25 0 285 185 163 33 chr20 5076990 5077082 -67076800 + Charlie7 DNA MER1_type 2509 2612 0 2056 118 4 0 chr20 5077668 5077939 -67075943 + AluSq SINE Alu 3 274 -39 27 0 0 0 chr20 5077939 5077966 -67075916 + AT_rich Low_complexity Low_complexity 1 27 0 815 232 0 0 chr20 5078083 5078247 -67075635 + FRAM SINE Alu 7 170 -6 252 269 0 0 chr20 5078259 5078311 -67075571 - L2 LINE L2 -19 3294 3243 664 228 30 101 chr20 5078452 5078838 -67075044 + MLT1H LTR MaLR 95 467 0 485 302 168 19 chr20 5078880 5079305 -67074577 - L2 LINE L2 -231 3082 2590 461 220 74 60 chr20 5079522 5079709 -67074173 - MIR SINE MIR -3 259 59 242 265 68 26 chr20 5080794 5080911 -67072971 + LTR16C LTR ERVL 182 303 -188 310 221 126 11 chr20 5080941 5081036 -67072846 + LTR16C LTR ERVL 380 485 -6 778 170 0 15 chr20 5081158 5081293 -67072589 + FLAM_C SINE Alu 1 133 0 660 306 51 0 chr20 5081356 5081591 -67072291 - L1ME3 LINE L1 -2 6160 5914 1604 238 72 12 chr20 5081592 5082021 -67071861 - MLT1C LTR MaLR -4 463 9 699 273 61 4 chr20 5082026 5082304 -67071578 - L1ME3 LINE L1 -242 5920 5627 522 0 0 0 chr20 5082779 5082837 -67071045 + (TAAAA)n Simple_repeat Simple_repeat 4 61 0 1900 170 55 18 chr20 5082838 5083221 -67070661 - L1MB7 LINE L1 -33 6151 5754 2395 259 75 22 chr20 5083362 5084095 -67069787 - L1ME3 LINE L1 -30 6132 5361 483 261 80 29 chr20 5084208 5084547 -67069335 - L1ME3 LINE L1 -619 5543 5194 287 179 0 0 chr20 5084550 5084606 -67069276 - Alu SINE Alu -5 297 242 781 172 9 4 chr20 5084606 5084763 -67069119 - L1MB4 LINE L1 -159 6021 5867 1657 180 45 7 chr20 5084765 5085054 -67068828 - AluJb SINE Alu -12 300 1 6763 170 19 11 chr20 5085063 5086403 -67067479 - L1MC3 LINE L1 -1 7784 6335 2220 161 43 21 chr20 5086451 5086874 -67067008 - MSTB1 LTR MaLR 0 432 1 1106 168 0 0 chr20 5087511 5087678 -67066204 + FAM SINE Alu 1 167 -8 1528 132 0 0 chr20 5087711 5087939 -67065943 + AluSg/x SINE Alu 82 309 -1 268 330 191 0 chr20 5088758 5088931 -67064951 - L2 LINE L2 -102 3170 2965 2186 97 7 0 chr20 5089470 5089770 -67064112 + AluSc SINE Alu 1 302 -7 1395 272 28 6 chr20 5090800 5091160 -67062722 + LTR16C LTR ERVL 124 491 0 1882 119 3 11 chr20 5091262 5091602 -67062280 - AluSx SINE Alu 0 338 1 1146 133 6 17 chr20 5091638 5091819 -67062063 - AluJo SINE Alu -43 269 91 1685 189 0 0 chr20 5092761 5093052 -67060830 - AluJo SINE Alu -15 297 7 1800 150 7 7 chr20 5093743 5094036 -67059846 + AluJb SINE Alu 1 293 -19 2129 106 3 6 chr20 5094036 5094347 -67059535 + AluSx SINE Alu 1 310 -2 21 0 0 0 chr20 5094670 5094691 -67059191 + AT_rich Low_complexity Low_complexity 1 21 0 997 212 33 0 chr20 5095038 5095250 -67058632 - MER20 DNA MER1_type 0 219 1 1780 150 11 0 chr20 5095927 5096214 -67057668 - AluJb SINE Alu -17 295 6 215 325 8 32 chr20 5096246 5096369 -67057513 + L2 LINE L2 2636 2755 -559 454 208 31 0 chr20 5096391 5096487 -67057395 + MER5A DNA MER1_type 11 109 -80 265 359 220 13 chr20 5096581 5096963 -67056919 + L2 LINE L2 2810 3270 -2 561 217 77 14 chr20 5097219 5097362 -67056520 - MER63A DNA MER1_type -6 204 53 217 348 43 0 chr20 5097452 5097544 -67056338 + L2 LINE L2 3172 3267 -5 2096 101 7 3 chr20 5098746 5099052 -67054830 + AluSp SINE Alu 7 313 0 497 317 66 49 chr20 5100746 5101112 -67052770 + L1MC4a LINE L1 5534 5905 -1903 2040 121 0 7 chr20 5101263 5101568 -67052314 + AluSx SINE Alu 1 303 -9 1897 128 3 0 chr20 5103217 5103499 -67050383 + AluSq SINE Alu 27 309 -4 694 214 132 6 chr20 5103815 5103997 -67049885 + MIR SINE MIR 21 225 -37 280 195 110 37 chr20 5104008 5104090 -67049792 - L2 LINE L2 -10 3262 3175 207 0 0 0 chr20 5105222 5105245 -67048637 + (TG)n Simple_repeat Simple_repeat 2 24 0 361 260 0 62 chr20 5105263 5105359 -67048523 - L1MC4 LINE L1 -1339 6703 6614 423 38 0 0 chr20 5105359 5105412 -67048470 + (CA)n Simple_repeat Simple_repeat 2 54 0 1730 121 72 8 chr20 5105414 5105679 -67048203 - AluJo SINE Alu -25 287 6 617 284 62 0 chr20 5105960 5106136 -67047746 - MIR SINE MIR -14 248 62 25 0 0 0 chr20 5107899 5107924 -67045958 + GC_rich Low_complexity Low_complexity 1 25 0 232 211 233 11 chr20 5108813 5108903 -67044979 - MIR3 SINE MIR -21 187 78 2205 165 6 3 chr20 5109856 5110220 -67043662 + MLT1A1 LTR MaLR 1 365 0 1859 209 88 33 chr20 5110235 5110302 -67043580 - L1ME3A LINE L1 0 6170 6108 2140 102 0 0 chr20 5110302 5110597 -67043285 - AluY SINE Alu -16 295 1 1859 209 88 33 chr20 5110597 5111075 -67042807 - L1ME3A LINE L1 -62 6108 5595 249 273 52 13 chr20 5111248 5111325 -67042557 + L2 LINE L2 3158 3237 -35 202 197 121 15 chr20 5112256 5112322 -67041560 + MIR3 SINE MIR 3 75 -133 1417 258 129 48 chr20 5112926 5113213 -67040669 - L1ME3A LINE L1 -9 6161 5899 1575 184 7 3 chr20 5113213 5113507 -67040375 - AluJo SINE Alu -17 295 1 1417 258 129 48 chr20 5113507 5113823 -67040059 - L1ME3A LINE L1 -271 5899 5509 972 202 9 37 chr20 5114017 5114235 -67039647 + Charlie4a DNA MER1_type 1 212 -296 347 137 0 0 chr20 5114236 5114287 -67039595 + MER81 DNA DNA 1 51 -63 516 209 27 0 chr20 5114289 5114399 -67039483 + MER81 DNA DNA 2 114 0 696 208 125 17 chr20 5114399 5114639 -67039243 + Charlie4a DNA MER1_type 206 471 -37 2239 97 0 0 chr20 5114659 5114959 -67038923 - AluSx SINE Alu -12 300 1 3155 71 7 0 chr20 5116044 5116455 -67037427 + L1PA8 LINE L1 5759 6172 0 2124 116 3 0 chr20 5117094 5117405 -67036477 + AluSx SINE Alu 1 312 0 1736 218 11 5 chr20 5117415 5117795 -67036087 - L1MB7 LINE L1 -5 6179 5798 1749 164 13 7 chr20 5118108 5118412 -67035470 + AluJb SINE Alu 1 306 -6 2148 155 45 18 chr20 5119612 5119992 -67033890 + MLT1B LTR MaLR 1 390 0 297 0 0 0 chr20 5120131 5120164 -67033718 + (T)n Simple_repeat Simple_repeat 1 33 0 249 183 56 56 chr20 5120401 5120472 -67033410 - MER91C DNA MER1_type -21 119 49 201 348 29 0 chr20 5120621 5120690 -67033192 + MIR SINE MIR 174 244 -18 1683 200 141 50 chr20 5120831 5121292 -67032590 - MLT2B1 LTR ERVL 0 520 18 435 258 49 63 chr20 5121302 5121445 -67032437 - L1ME4a LINE L1 -44 6077 5938 2466 31 0 0 chr20 5121445 5121733 -67032149 - AluY SINE Alu -21 290 3 435 258 49 63 chr20 5121733 5121876 -67032006 - L1ME4a LINE L1 -183 5938 5795 2059 100 0 0 chr20 5121948 5122259 -67031623 - AluSg SINE Alu 0 311 1 696 198 0 0 chr20 5122264 5122390 -67031492 - FRAM SINE Alu -18 158 33 650 290 36 23 chr20 5122920 5123218 -67030664 - MER115 DNA AcHobo -238 455 134 858 182 0 0 chr20 5123630 5123762 -67030120 + FLAM_A SINE Alu 1 132 -1 535 261 155 0 chr20 5124148 5124309 -67029573 + MER5A DNA MER1_type 4 189 0 979 180 22 11 chr20 5124581 5124764 -67029118 + MER5A DNA MER1_type 1 185 -4 2048 105 3 10 chr20 5125531 5125837 -67028045 - AluSq SINE Alu -9 304 1 2680 152 38 2 chr20 5125947 5126395 -67027487 - MER88 LTR ERVL 0 464 1 2329 145 32 54 chr20 5126672 5127045 -67026837 + Tigger2a DNA MER2_type 1 365 -2343 2139 82 7 0 chr20 5127045 5127353 -67026529 + AluSx SINE Alu 1 310 0 2329 145 32 54 chr20 5127353 5127420 -67026462 + Tigger2a DNA MER2_type 365 432 -2 24 32 0 0 chr20 5128066 5128097 -67025785 + AT_rich Low_complexity Low_complexity 1 31 0 585 196 43 43 chr20 5130759 5130922 -67022960 - L1MB8 LINE L1 0 6184 6022 971 275 210 7 chr20 5131415 5132097 -67021785 + L2 LINE L2 2476 3313 0 478 323 75 21 chr20 5132739 5133393 -67020489 + L1M4 LINE L1 4156 4844 -1302 405 313 64 38 chr20 5133474 5133675 -67020207 + L1M4 LINE L1 4942 5136 -1010 3633 104 73 0 chr20 5133675 5134212 -67019670 + L1PA13 LINE L1 5588 6163 0 405 313 64 38 chr20 5134212 5134460 -67019422 + L1M4 LINE L1 5136 5403 -743 221 196 0 0 chr20 5134940 5134986 -67018896 - L2 LINE L2 0 3313 3268 874 158 0 0 chr20 5134999 5135132 -67018750 - FLAM_C SINE Alu 0 133 1 1429 171 77 18 chr20 5135254 5135528 -67018354 - AluJo SINE Alu -14 298 9 282 270 22 45 chr20 5135584 5135673 -67018209 - L2 LINE L2 0 3272 3186 490 332 46 5 chr20 5135677 5135894 -67017988 - L2 LINE L2 -397 2917 2692 854 101 0 0 chr20 5135894 5136003 -67017879 + AluJb SINE Alu 15 123 -189 737 320 125 14 chr20 5136018 5136449 -67017433 - L2 LINE L2 -640 2674 2196 238 289 175 5 chr20 5136520 5136714 -67017168 + L1M4 LINE L1 3719 3945 -2201 311 248 115 31 chr20 5137052 5137278 -67016604 + L1M4 LINE L1 4372 4616 -1530 1247 219 4 4 chr20 5137327 5137583 -67016299 + L1 LINE L1 2581 2836 -3310 * 2822 157 9 0 chr20 5137577 5138037 -67015845 + L1 LINE L1 3640 4103 -2043 3432 143 27 13 chr20 5138038 5138658 -67015224 - L1 LINE L1 -1497 4649 4021 219 255 69 39 chr20 5138907 5139009 -67014873 - MIR SINE MIR -113 149 45 310 343 75 0 chr20 5139268 5139402 -67014480 + MER5B DNA MER1_type 5 148 -30 347 297 67 24 chr20 5140642 5140851 -67013031 - L1ME4a LINE L1 -288 5833 5616 249 286 13 13 chr20 5140943 5141020 -67012862 - MIR SINE MIR -102 160 84 231 277 9 54 chr20 5141104 5141216 -67012666 - L1ME4a LINE L1 -857 5502 5396 207 188 0 0 chr20 5142067 5142115 -67011767 + C-rich Low_complexity Low_complexity 4 51 0 27 73 0 0 chr20 5142384 5142439 -67011443 + GC_rich Low_complexity Low_complexity 1 55 0 22 0 0 0 chr20 5143019 5143041 -67010841 + GC_rich Low_complexity Low_complexity 1 22 0 1823 136 0 68 chr20 5143804 5144127 -67009755 + AluJo SINE Alu 1 301 -11 1940 244 46 33 chr20 5144840 5145323 -67008559 - MLT1G LTR MaLR 0 590 96 2390 94 0 0 chr20 5145323 5145622 -67008260 + AluSx SINE Alu 2 300 -12 1940 244 46 33 chr20 5145622 5145720 -67008162 - MLT1G LTR MaLR -494 96 1 595 271 110 123 chr20 5146219 5146357 -67007525 - L2 LINE L2 -478 2836 2698 1783 185 0 3 chr20 5146357 5146654 -67007228 - AluJb SINE Alu -16 296 1 595 271 110 123 chr20 5146654 5147169 -67006713 - L2 LINE L2 -616 2698 2022 895 124 51 39 chr20 5147169 5147347 -67006535 - MER5A DNA MER1_type -6 183 4 595 271 110 123 chr20 5147347 5147645 -67006237 - L2 LINE L2 -1292 2022 1722 192 77 0 0 chr20 5148046 5148072 -67005810 + (TC)n Simple_repeat Simple_repeat 2 27 0 26 0 0 27 chr20 5148314 5148338 -67005544 + AT_rich Low_complexity Low_complexity 1 25 -11 2406 88 0 0 chr20 5148338 5148632 -67005250 + AluSx SINE Alu 1 294 -18 26 0 0 27 chr20 5148632 5148644 -67005238 + AT_rich Low_complexity Low_complexity 25 36 0 2201 107 17 0 chr20 5149347 5149636 -67004246 - AluSx SINE Alu -18 294 1 438 311 38 30 chr20 5149960 5150195 -67003687 + LTR16C LTR ERVL 97 333 -158 1126 175 14 153 chr20 5152135 5152180 -67001702 + MLT1A1 LTR MaLR 1 51 -314 2233 102 0 7 chr20 5152180 5152474 -67001408 - AluSx SINE Alu -20 292 1 1126 175 14 153 chr20 5152474 5152793 -67001089 + MLT1A1 LTR MaLR 51 314 -51 2718 128 57 0 chr20 5153078 5153499 -67000383 - MER65A LTR ERV1 0 445 1 21 36 0 0 chr20 5153653 5153681 -67000201 + AT_rich Low_complexity Low_complexity 1 28 0 257 174 58 43 chr20 5153776 5153845 -67000037 - L1ME LINE L1 -270 5851 5782 264 164 164 0 chr20 5153919 5153986 -66999896 - L1M3 LINE L1 -561 5607 5530 556 176 34 8 chr20 5155202 5155321 -66998561 - MER3 DNA MER1_type -18 191 70 1605 266 42 13 chr20 5155336 5155810 -66998072 + MER74B LTR ERVL 60 547 -75 1855 138 95 0 chr20 5155875 5156158 -66997724 + AluSg SINE Alu 1 310 0 375 154 0 0 chr20 5156174 5156239 -66997643 + GA-rich Low_complexity Low_complexity 1 65 0 678 189 8 15 chr20 5156361 5156493 -66997389 - FLAM_A SINE Alu -2 131 1 2150 104 21 10 chr20 5156882 5157171 -66996711 - AluSx SINE Alu -20 292 1 231 277 131 15 chr20 5157372 5157502 -66996380 - MER21B LTR ERV1 -11 852 708 2864 10 0 3 chr20 5157580 5157892 -66995990 - AluY SINE Alu 0 311 1 375 241 108 59 chr20 5157895 5158098 -66995784 - HAL1 LINE L1 -1536 971 759 999 278 65 39 chr20 5158116 5158547 -66995335 - HAL1 LINE L1 -1860 647 206 484 254 76 45 chr20 5158658 5158946 -66994936 + L2 LINE L2 1968 2264 -1050 323 313 30 0 chr20 5158947 5159081 -66994801 - L2 LINE L2 -287 3026 2889 526 203 177 32 chr20 5159362 5159520 -66994362 + MER5A DNA MER1_type 9 189 0 249 282 0 68 chr20 5159687 5159790 -66994092 + L3 LINE CR1 1481 1576 -1 462 280 80 19 chr20 5159871 5160179 -66993703 - L1ME LINE L1 -747 5399 5269 396 71 0 0 chr20 5160238 5160294 -66993588 + (CA)n Simple_repeat Simple_repeat 2 57 0 1740 143 35 7 chr20 5160321 5160608 -66993274 + AluSx SINE Alu 1 295 -17 599 125 118 205 chr20 5160781 5160942 -66992940 + MLT1A2 LTR MaLR 3 142 -248 2244 95 7 0 chr20 5160942 5161237 -66992645 + AluSq SINE Alu 1 297 -16 599 125 118 205 chr20 5161237 5161342 -66992540 + MLT1A2 LTR MaLR 142 255 -135 2425 81 3 0 chr20 5162068 5162377 -66991505 + AluSq SINE Alu 1 310 -3 366 208 123 39 chr20 5162407 5162537 -66991345 + L1ME4a LINE L1 5970 6110 -11 311 231 69 39 chr20 5162593 5162723 -66991159 + L1ME4a LINE L1 5932 6065 -56 335 287 55 85 chr20 5162795 5162912 -66990970 - HAL1 LINE L1 -1097 1410 1291 4377 108 21 57 chr20 5162912 5163628 -66990254 - LTR8 LTR ERV1 0 691 2 335 287 55 85 chr20 5163628 5163817 -66990065 - HAL1 LINE L1 -1216 1291 1113 705 144 0 0 chr20 5164228 5164332 -66989550 - AluSx SINE Alu -22 288 185 252 146 91 0 chr20 5164348 5164403 -66989479 + LTR1B LTR ERV1 43 102 -724 491 242 121 18 chr20 5164413 5164578 -66989304 + LTR1 LTR ERV1 36 217 -568 661 222 146 77 chr20 5164673 5164907 -66988975 + LTR28 LTR ERV1 343 589 -237 1405 124 0 0 chr20 5164974 5165159 -66988723 - AluSx SINE Alu -123 189 5 4657 114 12 0 chr20 5165210 5165882 -66988000 + L1PB4 LINE L1 5463 6282 -21 608 151 0 0 chr20 5166298 5166391 -66987491 + AluJ/FLAM SINE Alu 2 94 -218 1331 92 11 0 chr20 5166391 5166575 -66987307 - MER30 DNA MER1_type -44 186 1 1303 201 16 33 chr20 5166601 5166904 -66986978 - L1MB7 LINE L1 -1 6183 5886 4548 103 37 83 chr20 5166904 5167319 -66986563 + MER4E LTR ERV1 1 434 -345 2197 48 58 55 chr20 5167319 5167628 -66986254 + AluY SINE Alu 1 310 -1 4548 103 37 83 chr20 5167628 5167756 -66986126 + MER4E LTR ERV1 434 566 -213 2397 137 36 5 chr20 5167756 5168142 -66985740 - MER48 LTR ERV1 0 398 1 4548 103 37 83 chr20 5168142 5168414 -66985468 + MER4E LTR ERV1 566 779 0 3249 186 24 16 chr20 5168414 5168475 -66985407 - L1MB7 LINE L1 -289 5889 5830 1872 157 7 0 chr20 5168475 5168768 -66985114 - AluJb SINE Alu -17 295 1 3249 186 24 16 chr20 5168768 5169146 -66984736 - L1MB7 LINE L1 -348 5830 5456 1434 158 114 70 chr20 5169146 5169575 -66984307 - LTR7 LTR ERV1 -2 448 1 3249 186 24 16 chr20 5169575 5170235 -66983647 - L1MB7 LINE L1 -722 5456 4781 1865 208 123 64 chr20 5170245 5170759 -66983123 - L1MCa LINE L1 -3953 2611 2172 254 33 0 0 chr20 5170759 5170789 -66983093 - MSTC LTR MaLR -75 353 324 1865 208 123 64 chr20 5170789 5171172 -66982710 - L1MCa LINE L1 -4392 2172 1813 1289 297 11 23 chr20 5171162 5171633 -66982249 - L1MCa LINE L1 -5576 469 5 * 383 198 222 12 chr20 5171845 5172012 -66981870 - L2 LINE L2 -2176 1138 937 1007 215 20 28 chr20 5172862 5173113 -66980769 - MSTD LTR MaLR 0 396 148 1807 32 28 0 chr20 5173131 5173347 -66980535 + L1PA5 LINE L1 5928 6149 -5 613 86 39 0 chr20 5173347 5173475 -66980407 + (TA)n Simple_repeat Simple_repeat 2 134 0 387 0 0 0 chr20 5173475 5173518 -66980364 + (CA)n Simple_repeat Simple_repeat 2 44 0 693 164 8 22 chr20 5173528 5173662 -66980220 - MSTD LTR MaLR -264 132 1 2292 98 7 10 chr20 5173890 5174196 -66979686 + AluSx SINE Alu 6 310 -2 586 234 30 14 chr20 5174586 5174751 -66979131 - MER77 LTR ERV1 -7 598 426 763 127 17 17 chr20 5174761 5174879 -66979003 + FRAM SINE Alu 21 138 -38 813 276 91 111 chr20 5174919 5175298 -66978584 - MER77 LTR ERV1 -117 488 81 5854 127 14 29 chr20 5175749 5176888 -66976994 + L1PB3 LINE L1 5031 6154 0 1306 213 281 19 chr20 5177358 5177781 -66976101 + MLT1F LTR MaLR 9 542 0 225 331 12 41 chr20 5177843 5178015 -66975867 - L2 LINE L2 -1626 1688 1522 1896 137 14 0 chr20 5178288 5178590 -66975292 + AluJb SINE Alu 1 306 0 880 191 0 0 chr20 5178680 5178837 -66975045 - MER3 DNA MER1_type -52 157 1 400 249 127 71 chr20 5179023 5179488 -66974394 + L1M4 LINE L1 3782 4273 -1873 1825 228 94 4 chr20 5179534 5180021 -66973861 + MER90 LTR ERV1 84 614 0 1977 152 30 0 chr20 5180046 5180343 -66973539 + AluJo SINE Alu 1 306 -6 1210 83 12 0 chr20 5180558 5180727 -66973155 - L1MB1 LINE L1 0 6168 5998 1319 97 0 43 chr20 5180727 5180913 -66972969 - AluSq SINE Alu -135 178 1 2977 123 65 45 chr20 5180915 5181467 -66972415 - L1MB1 LINE L1 -361 5828 5266 1431 196 0 4 chr20 5181475 5181705 -66972177 + MER8 DNA MER2_type 11 239 0 4834 198 47 15 chr20 5181705 5182732 -66971150 - L1MB1 LINE L1 -878 5268 4201 2077 143 0 0 chr20 5182732 5183026 -66970856 + AluSx SINE Alu 2 295 -17 4834 198 47 15 chr20 5183026 5183097 -66970785 - L1MB1 LINE L1 -1945 4201 4134 233 209 23 0 chr20 5183099 5183142 -66970740 - MER47B DNA MER2_type -374 44 1 531 158 0 0 chr20 5183157 5183239 -66970643 + MER47B DNA MER2_type 336 417 -1 658 138 0 0 chr20 5183264 5183358 -66970524 - Tigger1 DNA MER2_type -586 1832 1739 1096 156 0 0 chr20 5183358 5183525 -66970357 - AluSc SINE Alu -2 307 141 7097 151 17 12 chr20 5183531 5184678 -66969204 + THE1B-int LTR MaLR 427 1579 -1 742 80 143 2 chr20 5184680 5184792 -66969090 + THE1B LTR MaLR 3 121 -247 1602 88 4 18 chr20 5184792 5185018 -66968864 + MSTA-int LTR MaLR 1358 1580 0 2362 126 59 45 chr20 5185018 5185440 -66968442 + MSTA LTR MaLR 1 428 0 9282 123 6 4 chr20 5185442 5187121 -66966761 - Tigger1 DNA MER2_type -749 1669 1 1313 268 48 21 chr20 5187122 5187733 -66966149 - L1M3de LINE L1 -4982 909 4 1898 190 58 85 chr20 5188123 5188292 -66965590 + MER92B LTR ERV1 1 173 -463 2046 139 39 18 chr20 5188292 5188622 -66965260 - MER1B DNA MER1_type 0 337 1 1898 190 58 85 chr20 5188622 5188879 -66965003 + MER92B LTR ERV1 173 409 -227 2265 116 0 19 chr20 5188879 5189197 -66964685 - AluSx SINE Alu 0 312 1 1898 190 58 85 chr20 5189197 5189369 -66964513 + MER92B LTR ERV1 409 584 -52 1333 195 0 0 chr20 5189369 5189584 -66964298 - AluJo SINE Alu -14 298 84 834 207 0 0 chr20 5189863 5190008 -66963874 + FRAM SINE Alu 2 146 -30 1993 156 17 0 chr20 5190012 5190307 -66963575 - AluSx SINE Alu -10 302 3 1991 126 0 0 chr20 5191204 5191473 -66962409 + AluSx SINE Alu 1 269 -43 232 214 36 0 chr20 5192400 5192456 -66961426 + CT-rich Low_complexity Low_complexity 1 58 0 248 233 14 0 chr20 5192672 5192745 -66961137 + CT-rich Low_complexity Low_complexity 3 76 0 1676 176 10 30 chr20 5192768 5193069 -66960813 - AluJo SINE Alu -13 299 5 511 206 198 71 chr20 5193074 5193438 -66960444 - LTR16A1 LTR ERVL -37 420 11 863 294 202 29 chr20 5193517 5194982 -66958900 - L2 LINE L2 -4 3309 1565 2558 134 20 0 chr20 5195090 5195486 -66958396 + LTR26 LTR ERV1 1 404 -199 2680 154 11 50 chr20 5195562 5196107 -66957775 - LTR26B LTR ERV1 -7 524 1 2058 116 3 42 chr20 5196119 5196454 -66957428 - THE1C LTR MaLR -53 322 1 7812 114 10 5 chr20 5196454 5197685 -66956197 - THE1C-int LTR MaLR 0 1580 312 551 241 68 0 chr20 5198753 5198915 -66954967 - L1M4 LINE L1 -3379 2767 2595 1239 135 0 36 chr20 5198915 5199108 -66954774 - AluJo SINE Alu -7 305 120 520 205 49 0 chr20 5199710 5199832 -66954050 + MER94 DNA DNA 1 128 -6 207 204 0 0 chr20 5200553 5200602 -66953280 + CT-rich Low_complexity Low_complexity 1 49 0 1423 169 37 36 chr20 5200775 5200801 -66953081 - MLT2D LTR ERVL 0 414 390 402 21 0 0 chr20 5200801 5200848 -66953034 + (TG)n Simple_repeat Simple_repeat 2 48 0 1423 169 37 36 chr20 5200848 5201170 -66952712 - MLT2D LTR ERVL -24 390 1 296 272 52 44 chr20 5201293 5201429 -66952453 - MIR3 SINE MIR -65 143 7 2266 107 0 13 chr20 5202323 5202633 -66951249 + AluSg SINE Alu 1 306 -4 240 86 0 0 chr20 5206231 5206266 -66947616 + (A)n Simple_repeat Simple_repeat 1 35 0 205 232 11 105 chr20 5206273 5206368 -66947514 - MIR SINE MIR 0 262 177 397 188 0 38 chr20 5206369 5206449 -66947433 + MER116 DNA Mariner 2 78 -2 1901 121 0 93 chr20 5206666 5207013 -66946869 + AluSx SINE Alu 1 318 0 619 228 91 10 chr20 5207333 5207530 -66946352 + LTR33 LTR ERVL 308 520 -1 1917 104 93 11 chr20 5208441 5208720 -66945162 + AluSx SINE Alu 2 303 -9 383 286 29 100 chr20 5208785 5209134 -66944748 + MLT1I LTR MaLR 71 394 -15 2233 130 14 9 chr20 5210092 5210437 -66943445 - MER7A DNA MER2_type 0 346 2 671 281 130 4 chr20 5210444 5210675 -66943207 - MIR SINE MIR -1 261 2 791 199 37 0 chr20 5210921 5211082 -66942800 - MER5A DNA MER1_type -3 186 20 22 35 0 0 chr20 5212349 5212378 -66941504 + AT_rich Low_complexity Low_complexity 1 29 0 972 222 94 0 chr20 5212431 5212634 -66941248 + MIR SINE MIR 17 238 -24 722 129 11 0 chr20 5212665 5212794 -66941088 + L1MB3 LINE L1 5825 5957 -211 1385 140 4 25 chr20 5212842 5213085 -66940797 + L1MB3 LINE L1 5944 6181 -2 723 283 88 23 chr20 5213259 5213602 -66940280 + L1MC4a LINE L1 5578 5942 -1866 1609 160 42 11 chr20 5213609 5213872 -66940010 + AluSx SINE Alu 3 273 -39 402 74 0 0 chr20 5213873 5213927 -66939955 + (GGGGA)n Simple_repeat Simple_repeat 1 54 0 941 148 7 0 chr20 5215276 5215418 -66938464 - FLAM_C SINE Alu 0 143 1 270 218 39 13 chr20 5215717 5215782 -66938100 + (TATAG)n Simple_repeat Simple_repeat 5 74 -10 1725 151 0 96 chr20 5215782 5215935 -66937947 + AluJo SINE Alu 2 107 -195 1764 119 12 4 chr20 5215935 5216188 -66937694 + AluSq SINE Alu 11 265 -48 1725 151 0 96 chr20 5216188 5216366 -66937516 + AluJo SINE Alu 107 301 -1 270 218 39 13 chr20 5216366 5216378 -66937504 + (TATAG)n Simple_repeat Simple_repeat 74 84 0 2072 124 0 3 chr20 5220181 5220495 -66933387 + AluSx SINE Alu 1 313 0 439 225 137 85 chr20 5220501 5220794 -66933088 + L1ME3A LINE L1 5742 6049 -121 2216 130 0 0 chr20 5221468 5221775 -66932107 + AluSx SINE Alu 1 307 -5 1361 174 170 0 chr20 5221985 5222296 -66931586 - MLT1A1 LTR MaLR 0 365 2 341 202 45 11 chr20 5223248 5223337 -66930545 - L1MC4 LINE L1 -1337 6705 6614 781 146 47 113 chr20 5223339 5223369 -66930513 - MER20 DNA MER1_type 0 219 189 2169 109 0 3 chr20 5223369 5223677 -66930205 - AluSq SINE Alu 0 308 2 781 146 47 113 chr20 5223677 5223704 -66930178 - MER20 DNA MER1_type -30 189 162 908 176 0 24 chr20 5223704 5223874 -66930008 - FRAM SINE Alu 0 166 1 781 146 47 113 chr20 5223874 5224026 -66929856 - MER20 DNA MER1_type -57 162 22 2381 131 53 51 chr20 5224027 5224494 -66929388 + L1MB3 LINE L1 5708 6175 -8 313 232 0 0 chr20 5224494 5224550 -66929332 + L1MC4 LINE L1 6648 6703 -1339 1975 155 0 7 chr20 5224553 5224849 -66929033 - AluJb SINE Alu -18 294 1 1031 181 13 44 chr20 5224929 5225110 -66928772 + MLT1D LTR MaLR 267 452 -53 1792 190 0 10 chr20 5225110 5225415 -66928467 + AluJo SINE Alu 1 302 -10 1888 147 9 34 chr20 5225415 5225735 -66928147 + AluJb SINE Alu 1 312 0 1031 181 13 44 chr20 5225735 5225778 -66928104 + MLT1D LTR MaLR 450 485 -20 28 0 0 0 chr20 5225864 5225892 -66927990 + AT_rich Low_complexity Low_complexity 1 28 0 2128 94 56 3 chr20 5225988 5226276 -66927606 - AluSx SINE Alu -9 303 1 343 316 165 14 chr20 5226361 5226646 -66927236 - L2 LINE L2 0 3272 2945 1748 213 48 21 chr20 5226743 5227227 -66926655 + MLT1D LTR MaLR 1 497 -8 194 275 73 73 chr20 5227242 5227351 -66926531 - L2 LINE L2 -583 2731 2623 181 340 107 14 chr20 5227750 5227965 -66925917 - L2 LINE L2 -1241 2073 1839 1712 157 27 27 chr20 5228090 5228383 -66925499 - AluJo SINE Alu -19 293 1 423 263 52 66 chr20 5228913 5229202 -66924680 + L1 LINE L1 5118 5402 -744 190 273 30 30 chr20 5229288 5229387 -66924495 + L2 LINE L2 2168 2266 -1048 1981 153 7 0 chr20 5230125 5230413 -66923469 - AluJo SINE Alu -12 300 11 1043 199 178 23 chr20 5231301 5231694 -66922188 - LTR16A1 LTR ERVL -3 454 1 1418 188 59 26 chr20 5232721 5232993 -66920889 + AluJo SINE Alu 6 286 -26 180 0 0 0 chr20 5232993 5233013 -66920869 + (CAAAT)n Simple_repeat Simple_repeat 2 21 0 520 258 17 0 chr20 5233013 5233133 -66920749 + MER5B DNA MER1_type 57 178 0 622 241 21 7 chr20 5233911 5234056 -66919826 - MIR SINE MIR -69 193 47 817 185 12 19 chr20 5234164 5234326 -66919556 - MER5A DNA MER1_type -1 188 28 327 266 142 0 chr20 5234334 5234447 -66919435 - MIR SINE MIR -54 208 80 235 225 27 0 chr20 5235362 5235519 -66918363 + (TG)n Simple_repeat Simple_repeat 1 190 0 22 56 0 0 chr20 5237622 5237658 -66916224 + AT_rich Low_complexity Low_complexity 1 36 0 1854 154 3 17 chr20 5237670 5237962 -66915920 + AluJo SINE Alu 13 300 -12 1648 155 0 7 chr20 5237992 5238283 -66915599 + L1MB4 LINE L1 5890 6178 -2 547 297 104 55 chr20 5238302 5238470 -66915412 - L1ME4a LINE L1 -61 6060 5902 2279 82 0 4 chr20 5238470 5238749 -66915133 + AluSq SINE Alu 11 288 -25 547 297 104 55 chr20 5238749 5239001 -66914881 - L1ME4a LINE L1 -219 5902 5619 231 118 0 0 chr20 5239124 5239158 -66914724 - MER63 DNA MER1_type -402 34 1 232 279 88 0 chr20 5239525 5239593 -66914289 - MIR3 SINE MIR -23 185 112 2334 113 0 0 chr20 5239623 5239916 -66913966 + AluSx SINE Alu 1 293 -19 788 217 38 71 chr20 5240110 5240322 -66913560 - MER63A DNA MER1_type -5 205 1 403 200 131 39 chr20 5240484 5240589 -66913293 - MIR SINE MIR -24 238 117 2493 96 0 0 chr20 5240589 5240901 -66912981 - AluSq SINE Alu -1 312 1 403 200 131 39 chr20 5240901 5240925 -66912957 - MIR SINE MIR -145 117 97 675 269 133 37 chr20 5240944 5241215 -66912667 - LTR16C LTR ERVL 0 491 195 1905 153 6 31 chr20 5241861 5242181 -66911701 + AluJo SINE Alu 1 312 0 21 71 0 0 chr20 5244716 5244758 -66909124 + GC_rich Low_complexity Low_complexity 1 42 0 24 0 0 0 chr20 5244925 5244949 -66908933 + GC_rich Low_complexity Low_complexity 1 24 0 307 344 0 39 chr20 5245139 5245319 -66908563 + C-rich Low_complexity Low_complexity 4 176 0 2127 140 3 13 chr20 5246722 5247037 -66906845 - AluJo SINE Alu 0 312 1 2134 122 14 3 chr20 5247287 5247583 -66906299 - AluSq SINE Alu -14 299 1 1077 91 0 0 chr20 5247705 5247837 -66906045 + AluSq/x SINE Alu 1 132 -181 1867 167 15 13 chr20 5247837 5248232 -66905650 - Charlie5 DNA MER1_type -3 2609 2214 420 142 82 97 chr20 5248218 5248266 -66905616 - MER3 DNA MER1_type -40 122 122 * 2674 49 0 0 chr20 5248266 5248570 -66905312 + AluY SINE Alu 1 304 -7 420 142 82 97 chr20 5248570 5248655 -66905227 - MER3 DNA MER1_type -39 123 38 2263 98 14 0 chr20 5249011 5249333 -66904549 + AluSq SINE Alu 1 313 0 769 296 98 15 chr20 5249558 5249832 -66904050 - LTR16C LTR ERVL 0 491 195 2326 89 16 22 chr20 5249909 5250222 -66903660 + AluSx SINE Alu 1 311 -1 2035 228 61 23 chr20 5251305 5251832 -66902050 + MLT1H LTR MaLR 1 547 -2 252 86 0 0 chr20 5252394 5252429 -66901453 + (GAAAA)n Simple_repeat Simple_repeat 2 36 0 331 229 0 76 chr20 5252721 5252826 -66901056 + L1MC4 LINE L1 6611 6707 -1335 1891 149 30 7 chr20 5253079 5253380 -66900502 + AluJb SINE Alu 1 308 -4 306 316 89 59 chr20 5253382 5253740 -66900142 + HAL1 LINE L1 895 1263 -1244 290 261 43 87 chr20 5253846 5253961 -66899921 + L2 LINE L2 3195 3304 -9 231 65 0 0 chr20 5254071 5254102 -66899780 - L1P4 LINE L1 -436 5732 5702 848 160 0 0 chr20 5254103 5254228 -66899654 + FLAM_C SINE Alu 1 125 -18 2171 92 112 9 chr20 5254254 5254601 -66899281 + L1PA15 LINE L1 5777 6159 -6 306 297 14 14 chr20 5254829 5254967 -66898915 + HAL1b LINE L1 670 807 -541 1362 197 0 28 chr20 5255512 5255766 -66898116 + AluJo SINE Alu 44 290 -22 288 0 0 0 chr20 5256487 5256519 -66897363 + (TA)n Simple_repeat Simple_repeat 2 33 0 2486 84 0 0 chr20 5256527 5256837 -66897045 - AluSg SINE Alu 0 310 1 21 0 0 0 chr20 5256837 5256858 -66897024 + AT_rich Low_complexity Low_complexity 1 21 0 280 288 76 0 chr20 5257007 5257125 -66896757 - L2 LINE L2 -338 2976 2850 183 333 90 9 chr20 5257864 5257975 -66895907 - L2 LINE L2 -446 2868 2749 360 240 20 10 chr20 5257978 5258078 -66895804 - MLT2E LTR ERVL -50 578 478 765 284 171 19 chr20 5258092 5258292 -66895590 - MLT2F LTR ERVL -103 560 392 1833 144 13 33 chr20 5258292 5258598 -66895284 + AluJo SINE Alu 1 300 -12 765 284 171 19 chr20 5258598 5258883 -66894999 - MLT2F LTR ERVL -271 392 1 276 423 16 0 chr20 5259180 5259362 -66894520 - L2 LINE L2 -558 2756 2572 2201 100 3 17 chr20 5359439 5359740 -66794142 - AluSc SINE Alu -11 298 2 2222 96 3 3 chr20 5359748 5360040 -66793842 - AluSx SINE Alu -20 292 1 2443 85 0 0 chr20 5360281 5360587 -66793295 + AluY SINE Alu 1 306 -5 2263 118 0 0 chr20 5360753 5361059 -66792823 + AluSx SINE Alu 1 306 -6 2359 88 7 0 chr20 5361348 5361645 -66792237 + AluSx SINE Alu 1 299 -13 2386 78 16 3 chr20 5361937 5362246 -66791636 - AluSp SINE Alu 0 313 1 2087 111 13 13 chr20 5363551 5363858 -66790024 + AluSx SINE Alu 1 307 -5 23 0 0 0 chr20 5364535 5364558 -66789324 + AT_rich Low_complexity Low_complexity 1 23 0 1727 154 45 17 chr20 5364630 5364922 -66788960 - AluJb SINE Alu -12 300 1 1619 165 74 3 chr20 5364931 5365100 -66788782 - AluJb SINE Alu -7 305 106 279 0 0 0 chr20 5365100 5365131 -66788751 + (TG)n Simple_repeat Simple_repeat 2 32 0 1619 165 74 3 chr20 5365131 5365246 -66788636 - AluJb SINE Alu -206 106 1 1767 189 0 13 chr20 5365667 5365980 -66787902 - AluJb SINE Alu -3 309 1 277 224 0 0 chr20 5366476 5366534 -66787348 - L1MC/D LINE L1 -2055 5753 5696 1137 162 0 0 chr20 5366683 5366850 -66787032 + FRAM SINE Alu 2 168 -8 2250 118 0 6 chr20 5367042 5367357 -66786525 + AluSp SINE Alu 1 313 0 2221 109 0 13 chr20 5367410 5367714 -66786168 + AluSg SINE Alu 1 300 -10 333 0 0 0 chr20 5369577 5369614 -66784268 + (TG)n Simple_repeat Simple_repeat 2 38 0 1159 190 90 13 chr20 5369722 5370022 -66783860 - MER33 DNA MER1_type -1 323 1 1550 189 27 30 chr20 5370340 5370440 -66783442 - AluJo SINE Alu -17 295 196 2212 117 0 0 chr20 5370440 5370739 -66783143 - AluSx SINE Alu -13 299 1 1550 189 27 30 chr20 5370739 5370934 -66782948 - AluJo SINE Alu -116 196 1 349 205 256 0 chr20 5371397 5371514 -66782368 - L1ME4a LINE L1 -11 6110 5964 228 133 67 0 chr20 5371515 5371560 -66782322 + CT-rich Low_complexity Low_complexity 3 50 0 1116 134 34 6 chr20 5371561 5371740 -66782142 - AluJb SINE Alu 0 312 129 426 298 30 38 chr20 5371864 5372129 -66781753 - L1ME4a LINE L1 -303 5818 5556 1632 151 50 4 chr20 5372131 5372389 -66781493 + AluJo SINE Alu 3 272 -40 1517 107 0 47 chr20 5372489 5372723 -66781159 + AluSg/x SINE Alu 83 305 -5 798 164 0 0 chr20 5372723 5372839 -66781043 - AluJo/FLAM SINE Alu -186 116 1 383 143 57 0 chr20 5372977 5373047 -66780835 + FLAM_A SINE Alu 60 133 0 2327 92 0 3 chr20 5374026 5374320 -66779562 + AluSg SINE Alu 14 306 -4 815 153 8 0 chr20 5374424 5374548 -66779334 + FLAM_C SINE Alu 1 125 -18 22 35 0 0 chr20 5374555 5374584 -66779298 + AT_rich Low_complexity Low_complexity 1 29 0 323 265 108 34 chr20 5374918 5375122 -66778760 + L1ME4a LINE L1 5268 5486 -692 542 230 155 24 chr20 5375227 5375518 -66778364 + L1ME4a LINE L1 5635 5963 -158 2206 110 7 7 chr20 5375523 5375832 -66778050 - AluSx SINE Alu -3 309 1 443 252 132 13 chr20 5376423 5376582 -66777300 + MER5B DNA MER1_type 1 178 0 189 0 0 0 chr20 5376663 5376684 -66777198 + (TCCC)n Simple_repeat Simple_repeat 4 24 0 2062 152 0 0 chr20 5376691 5377001 -66776881 - AluY SINE Alu -1 310 1 2344 87 0 0 chr20 5377003 5377291 -66776591 - AluSg SINE Alu -20 290 3 2761 175 46 72 chr20 5377427 5377824 -66776058 + L1MB7 LINE L1 4553 4959 -1194 2424 88 3 0 chr20 5377824 5378120 -66775762 + AluSp SINE Alu 1 297 -16 2761 175 46 72 chr20 5378120 5378365 -66775517 + L1MB7 LINE L1 4959 5209 -944 2441 76 3 0 chr20 5378365 5378666 -66775216 + AluY SINE Alu 1 302 -9 2761 175 46 72 chr20 5378666 5378677 -66775205 + L1MB7 LINE L1 5209 5219 -934 2386 75 14 0 chr20 5378677 5378971 -66774911 + AluSp SINE Alu 1 298 -15 2761 175 46 72 chr20 5378971 5379129 -66774753 + L1MB7 LINE L1 5219 5340 -813 694 175 58 7 chr20 5379135 5379272 -66774610 + FAM SINE Alu 14 157 -28 2488 68 3 0 chr20 5379272 5379567 -66774315 + AluY SINE Alu 1 296 -15 3342 164 122 37 chr20 5379589 5379856 -66774026 + L1MB7 LINE L1 5317 5560 -624 2081 134 0 3 chr20 5379856 5380155 -66773727 + AluSc SINE Alu 1 298 -11 3342 164 122 37 chr20 5380155 5380450 -66773432 + L1MB7 LINE L1 5560 5829 -355 2218 121 0 0 chr20 5380450 5380748 -66773134 - AluSx SINE Alu -14 298 1 3342 164 122 37 chr20 5380748 5380972 -66772910 + L1MB7 LINE L1 5829 6171 -13 681 159 48 8 chr20 5381186 5381312 -66772570 + FLAM_C SINE Alu 1 131 -2 2038 123 0 0 chr20 5381346 5381614 -66772268 - AluSq SINE Alu -45 268 1 432 55 0 0 chr20 5381634 5381689 -66772193 + (CA)n Simple_repeat Simple_repeat 2 56 0 2523 52 7 0 chr20 5382565 5382856 -66771026 + AluY SINE Alu 1 293 -18 2178 118 0 10 chr20 5383015 5383312 -66770570 + AluSq SINE Alu 1 294 -19 1877 113 21 25 chr20 5383318 5383454 -66770428 + AluSq SINE Alu 1 136 -177 2252 129 0 0 chr20 5383454 5383763 -66770119 + AluSc SINE Alu 1 309 0 1877 113 21 25 chr20 5383763 5383908 -66769974 + AluSq SINE Alu 136 281 -32 2367 85 7 13 chr20 5383954 5384260 -66769622 + AluSg SINE Alu 1 304 -6 1408 126 0 9 chr20 5384313 5384527 -66769355 - MER46B DNA MER2_type 0 236 25 821 231 19 0 chr20 5384529 5384685 -66769197 + FRAM SINE Alu 1 159 -17 650 134 228 0 chr20 5384685 5384812 -66769070 - MER46B DNA MER2_type -201 35 5 268 237 183 15 chr20 5384905 5385036 -66768846 + MLT1J1 LTR MaLR 33 185 -261 260 269 0 0 chr20 5385086 5385138 -66768744 + MLT1J2 LTR MaLR 280 331 -119 661 198 9 0 chr20 5385238 5385354 -66768528 + FLAM_C SINE Alu 2 118 -25 2008 135 3 10 chr20 5385359 5385671 -66768211 - AluSx SINE Alu -2 310 1 1807 120 48 10 chr20 5385699 5385991 -66767891 + AluSq SINE Alu 1 303 -10 1358 205 7 17 chr20 5386110 5386398 -66767484 - AluJo SINE Alu -16 296 12 2192 111 0 0 chr20 5386441 5386720 -66767162 + AluSg SINE Alu 1 279 -31 396 0 0 0 chr20 5386720 5386764 -66767118 + (CA)n Simple_repeat Simple_repeat 1 44 0 242 263 0 25 chr20 5386817 5386897 -66766985 + L1M4 LINE L1 4519 4596 -1550 1666 80 0 0 chr20 5386912 5387111 -66766771 + AluSg/x SINE Alu 86 284 -28 2380 88 3 7 chr20 5387503 5387809 -66766073 - AluSp SINE Alu -8 305 1 1033 154 0 154 chr20 5387883 5387996 -66765886 + MER46A DNA MER2_type 1 47 -2684 2193 75 0 91 chr20 5387996 5388327 -66765555 + AluY SINE Alu 1 301 -10 1033 154 0 154 chr20 5388327 5388492 -66765390 + MER46A DNA MER2_type 47 236 0 1491 127 79 89 chr20 5388799 5389090 -66764792 + AluJb SINE Alu 1 288 -24 251 94 0 0 chr20 5389153 5389185 -66764697 - MER58A DNA MER1_type -3 221 190 283 208 0 0 chr20 5389200 5389253 -66764629 - MER58A DNA MER1_type -15 92 40 * 440 236 0 0 chr20 5389252 5389341 -66764541 + MER5A DNA MER1_type 17 105 -84 1984 113 78 0 chr20 5389502 5389785 -66764097 + AluSg SINE Alu 1 305 -5 1271 128 6 0 chr20 5389785 5389964 -66763918 + AluSq SINE Alu 134 313 0 324 357 40 20 chr20 5390686 5390885 -66762997 + MIR SINE MIR 27 229 -33 2399 110 0 0 chr20 5391405 5391715 -66762167 + AluSg SINE Alu 1 310 0 718 243 283 28 chr20 5391878 5392477 -66761405 + L2 LINE L2 2231 2676 -637 1262 201 67 62 chr20 5392477 5392634 -66761248 + MLT1B LTR MaLR 1 156 -234 1471 161 113 0 chr20 5392634 5392792 -66761090 - AluJb SINE Alu -20 292 95 216 0 0 0 chr20 5392792 5392816 -66761066 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 1471 161 113 0 chr20 5392816 5392905 -66760977 - AluJb SINE Alu -217 95 17 1262 201 67 62 chr20 5392905 5393135 -66760747 + MLT1B LTR MaLR 156 390 0 718 243 283 28 chr20 5393135 5393348 -66760534 + L2 LINE L2 2676 3312 -1 2290 104 7 0 chr20 5393805 5394104 -66759778 - AluSx SINE Alu -11 301 1 942 140 0 7 chr20 5394556 5394692 -66759190 - FLAM_C SINE Alu -8 135 1 227 286 66 22 chr20 5395352 5395443 -66758439 - MIR SINE MIR -92 116 22 24 0 0 0 chr20 5396141 5396165 -66757717 + GC_rich Low_complexity Low_complexity 1 24 0 21 57 0 0 chr20 5396199 5396234 -66757648 + GC_rich Low_complexity Low_complexity 1 35 0 32 111 0 0 chr20 5396255 5396399 -66757483 + GC_rich Low_complexity Low_complexity 1 144 0 24 32 0 0 chr20 5396507 5396538 -66757344 + GC_rich Low_complexity Low_complexity 1 31 0 218 186 0 86 chr20 5396551 5396621 -66757261 + C-rich Low_complexity Low_complexity 1 64 0 340 211 0 0 chr20 5397069 5397137 -66756745 - MER5A DNA MER1_type -81 101 32 406 259 41 41 chr20 5397188 5397358 -66756524 + MER5A DNA MER1_type 18 187 -2 * 904 178 0 6 chr20 5397211 5397374 -66756508 - MER5A DNA MER1_type -27 162 1 864 220 23 0 chr20 5397721 5397894 -66755988 - AluJb SINE Alu -2 310 134 507 131 0 24 chr20 5397905 5397989 -66755893 + MER4A LTR ERV1 583 664 0 2505 21 0 3 chr20 5398101 5398423 -66755459 + AluY SINE Alu 1 321 0 755 168 23 15 chr20 5399563 5399694 -66754188 + FLAM_C SINE Alu 1 132 -1 2427 57 7 0 chr20 5399717 5400069 -66753813 + AluSp SINE Alu 1 354 0 1368 118 3 132 chr20 5400599 5400705 -66753177 - MER58D DNA MER1_type -2042 378 260 2428 72 7 0 chr20 5400705 5400996 -66752886 + AluSq SINE Alu 1 293 -20 1368 118 3 132 chr20 5400996 5401087 -66752795 - MER58D DNA MER1_type -2160 260 243 2219 113 0 7 chr20 5401087 5401397 -66752485 - AluSg SINE Alu -2 308 1 1368 118 3 132 chr20 5401397 5401547 -66752335 - MER58D DNA MER1_type -2177 243 75 1776 124 97 0 chr20 5401547 5401840 -66752042 - AluSx SINE Alu 0 318 1 279 79 0 0 chr20 5401948 5401986 -66751896 + (TG)n Simple_repeat Simple_repeat 2 39 0 298 204 0 117 chr20 5401987 5402090 -66751792 + L1ME3A LINE L1 5688 5778 -2030 1413 151 34 50 chr20 5402200 5402244 -66751638 - L1MB8 LINE L1 -13 6167 6124 1976 174 0 0 chr20 5402244 5402555 -66751327 + AluSx SINE Alu 1 311 -1 1413 151 34 50 chr20 5402555 5402836 -66751046 - L1MB8 LINE L1 -56 6124 5851 276 155 0 13 chr20 5402842 5402870 -66751012 + Alu SINE Alu 247 247 -55 417 97 0 108 chr20 5402870 5402909 -66750973 - L1MB4 LINE L1 0 6180 6155 2429 91 0 0 chr20 5402909 5403205 -66750677 - AluSq SINE Alu -17 296 1 417 97 0 108 chr20 5403205 5403258 -66750624 - L1MB4 LINE L1 -25 6155 6098 276 155 0 13 chr20 5403258 5403294 -66750588 + Alu SINE Alu 247 282 -20 875 104 64 0 chr20 5403737 5403862 -66750020 - FLAM_C SINE Alu 0 133 1 363 358 64 9 chr20 5403913 5404243 -66749639 + L2 LINE L2 1758 2105 -1209 290 306 65 9 chr20 5404490 5404598 -66749284 + L2 LINE L2 3136 3249 -23 2476 156 105 49 chr20 5404740 5404809 -66749073 - MLT2B2 LTR ERVL 0 515 451 2651 43 0 0 chr20 5404809 5405109 -66748773 + AluY SINE Alu 1 300 -11 2476 156 105 49 chr20 5405109 5405525 -66748357 - MLT2B2 LTR ERVL -64 451 3 1472 190 11 7 chr20 5405603 5405736 -66748146 + AluJb SINE Alu 1 132 -180 2082 116 24 0 chr20 5405736 5406030 -66747852 + AluSq SINE Alu 1 301 -12 1472 190 11 7 chr20 5406030 5406175 -66747707 + AluJb SINE Alu 132 280 -32 858 126 0 0 chr20 5406180 5406315 -66747567 + (GGAA)n Simple_repeat Simple_repeat 4 138 0 207 0 0 0 chr20 5406504 5406527 -66747355 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 579 265 85 5 chr20 5406532 5406732 -66747150 + L1ME3A LINE L1 5935 6150 -20 2243 92 0 41 chr20 5406737 5407052 -66746830 - AluSq SINE Alu -9 304 3 391 279 19 51 chr20 5407285 5407443 -66746439 + MIR SINE MIR 60 212 -50 219 320 0 40 chr20 5407681 5407756 -66746126 - L2 LINE L2 -13 3259 3188 2321 108 3 6 chr20 5407765 5408079 -66745803 + AluSp SINE Alu 1 313 0 2355 101 0 0 chr20 5408085 5408382 -66745500 + AluSx SINE Alu 1 297 -15 370 150 17 0 chr20 5408912 5408972 -66744910 - AluJ/FLAM SINE Alu -241 61 1 610 280 134 18 chr20 5409124 5409419 -66744463 - L2 LINE L2 -246 3067 2727 1055 183 10 5 chr20 5409419 5409616 -66744266 - AluJo SINE Alu -11 301 104 236 158 0 92 chr20 5409636 5409674 -66744208 + A-rich Low_complexity Low_complexity 2 31 -39 2414 98 0 0 chr20 5409674 5409979 -66743903 + AluSc SINE Alu 1 305 -4 236 158 0 92 chr20 5409979 5410016 -66743866 + A-rich Low_complexity Low_complexity 31 70 0 722 118 0 96 chr20 5410026 5410162 -66743720 - FLAM_C SINE Alu -10 133 11 862 288 87 78 chr20 5410165 5410342 -66743540 - L2 LINE L2 -593 2721 2547 2458 68 3 10 chr20 5410342 5410649 -66743233 - AluY SINE Alu -6 305 1 2459 90 3 0 chr20 5410654 5410965 -66742917 - AluSx SINE Alu 0 312 1 862 288 87 78 chr20 5410965 5410986 -66742896 - L2 LINE L2 -770 2544 2525 2268 133 0 0 chr20 5410986 5411295 -66742587 + AluSx SINE Alu 1 309 -3 862 288 87 78 chr20 5411295 5411759 -66742123 - L2 LINE L2 -789 2525 2046 674 216 0 0 chr20 5411870 5411986 -66741896 + FLAM_C SINE Alu 1 116 -17 204 200 0 0 chr20 5411987 5412047 -66741835 + T-rich Low_complexity Low_complexity 1 60 0 2345 119 0 0 chr20 5412119 5412430 -66741452 + AluSx SINE Alu 1 311 -1 2221 121 7 0 chr20 5412430 5412735 -66741147 + AluSp SINE Alu 1 307 -6 320 247 14 0 chr20 5412735 5412808 -66741074 - LTR16A1 LTR ERVL -14 443 370 492 239 64 0 chr20 5412809 5412918 -66740964 - FLAM_C SINE Alu -24 119 4 916 184 19 6 chr20 5412992 5413150 -66740732 + FRAM SINE Alu 1 160 -16 441 272 45 75 chr20 5413159 5413424 -66740458 - LTR16A1 LTR ERVL -141 316 60 1703 136 0 32 chr20 5413524 5413775 -66740107 + AluSq SINE Alu 1 243 -70 343 212 0 59 chr20 5413912 5413997 -66739885 + MIR SINE MIR 77 156 -106 2018 132 28 0 chr20 5414016 5414303 -66739579 + AluSx SINE Alu 1 295 -17 646 179 37 49 chr20 5414330 5414492 -66739390 - MIR SINE MIR -11 251 92 1869 155 24 10 chr20 5414492 5414788 -66739094 + AluJb SINE Alu 6 305 -7 671 180 0 33 chr20 5414868 5414990 -66738892 + FLAM_C SINE Alu 1 118 -15 2377 108 0 0 chr20 5415197 5415503 -66738379 + AluSx SINE Alu 7 312 0 294 327 192 24 chr20 5415574 5415913 -66737969 - L2 LINE L2 0 3313 2918 519 241 21 7 chr20 5416272 5416413 -66737469 - L1ME3 LINE L1 -50 6112 5970 189 0 0 0 chr20 5416438 5416459 -66737423 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 741 68 0 0 chr20 5416485 5416573 -66737309 + AluSg SINE Alu 52 139 -171 2193 104 0 22 chr20 5416573 5416889 -66736993 + AluSc SINE Alu 1 309 0 1165 239 41 52 chr20 5416889 5417017 -66736865 - L1MC4 LINE L1 -228 7814 7686 2571 74 0 0 chr20 5417017 5417328 -66736554 - AluY SINE Alu 0 311 1 1165 239 41 52 chr20 5417328 5417434 -66736448 - L1MC4 LINE L1 -356 7686 7580 1926 154 30 7 chr20 5417434 5417739 -66736143 - AluJb SINE Alu 0 312 1 1165 239 41 52 chr20 5417739 5417921 -66735961 - L1MC4 LINE L1 -462 7580 7400 796 226 169 19 chr20 5417921 5418045 -66735837 - AluJo SINE Alu -1 301 197 2299 95 20 0 chr20 5418045 5418340 -66735542 - AluSx SINE Alu -9 303 3 796 226 169 19 chr20 5418340 5418476 -66735406 - AluJo SINE Alu -105 197 2 1165 239 41 52 chr20 5418476 5418497 -66735385 - L1MC4 LINE L1 -642 7400 7380 4156 170 47 49 chr20 5418509 5418543 -66735339 - L1MB3 LINE L1 -1 6182 6149 2310 97 3 3 chr20 5418543 5418843 -66735039 - AluSq SINE Alu -13 300 1 4156 170 47 49 chr20 5418843 5419593 -66734289 - L1MB3 LINE L1 -34 6149 5399 2360 112 0 6 chr20 5419593 5419907 -66733975 - AluSx SINE Alu 0 312 1 4156 170 47 49 chr20 5419907 5419935 -66733947 - L1MB3 LINE L1 -784 5399 5372 1901 174 10 3 chr20 5419935 5420245 -66733637 + AluJb SINE Alu 1 312 0 4156 170 47 49 chr20 5420245 5420270 -66733612 - L1MB3 LINE L1 -811 5372 5348 776 131 54 31 chr20 5420270 5420400 -66733482 - FLAM_A SINE Alu 0 133 1 4156 170 47 49 chr20 5420400 5420570 -66733312 - L1MB3 LINE L1 -835 5348 5155 2197 107 7 3 chr20 5420581 5420872 -66733010 + AluSg SINE Alu 1 292 -18 733 68 34 59 chr20 5420872 5420981 -66732901 - AluJo/FRAM SINE Alu -21 291 184 690 13 0 0 chr20 5420987 5421066 -66732816 + (TTTTC)n Simple_repeat Simple_repeat 2 80 0 981 185 0 0 chr20 5421068 5421225 -66732657 - AluJb SINE Alu -31 281 125 400 256 47 0 chr20 5421235 5421321 -66732561 + L1MC4 LINE L1 6614 6703 -1339 745 156 62 8 chr20 5421322 5421450 -66732432 - AluJb SINE Alu -176 136 2 281 79 0 0 chr20 5421476 5421514 -66732368 - MER4D LTR ERV1 -74 798 761 1454 209 38 3 chr20 5421523 5421862 -66732020 - L1M4 LINE L1 -950 5196 4846 441 36 0 0 chr20 5421864 5421919 -66731963 + (TCTCCC)n Simple_repeat Simple_repeat 1 55 0 5563 79 39 9 chr20 5421919 5422705 -66731177 + SVA Other Other 57 866 -520 6765 66 34 28 chr20 5422720 5423672 -66730210 + SVA Other Other 430 1386 0 938 204 0 0 chr20 5423684 5423870 -66730012 - L1M4 LINE L1 -1287 4859 4674 2284 131 0 0 chr20 5424119 5424431 -66729451 + AluSx SINE Alu 1 312 0 2125 102 3 31 chr20 5424668 5424993 -66728889 + AluSp SINE Alu 1 317 0 727 183 21 14 chr20 5425185 5425327 -66728555 + FRAM SINE Alu 26 168 -8 831 254 26 29 chr20 5425577 5425849 -66728033 + LTR16C LTR ERVL 213 483 -8 356 234 39 39 chr20 5425859 5425941 -66727941 - L1MC4a LINE L1 -1902 5906 5822 2117 136 3 0 chr20 5425941 5426235 -66727647 - AluJb SINE Alu -4 308 14 356 234 39 39 chr20 5426235 5426280 -66727602 - L1MC4a LINE L1 -1985 5823 5779 215 225 0 0 chr20 5426532 5426572 -66727310 + CT-rich Low_complexity Low_complexity 4 43 0 300 231 0 44 chr20 5426653 5426744 -66727138 + Charlie8 DNA MER1_type 64 150 -2267 2079 98 0 52 chr20 5426788 5427094 -66726788 + AluSq SINE Alu 1 290 -23 2179 121 0 13 chr20 5427314 5427482 -66726400 - AluSx SINE Alu -11 301 137 2429 91 0 13 chr20 5427482 5427789 -66726093 - AluSx SINE Alu -9 303 1 2179 121 0 13 chr20 5427789 5427925 -66725957 - AluSx SINE Alu -175 137 1 711 207 0 0 chr20 5427968 5428089 -66725793 + FRAM SINE Alu 25 145 -31 1383 85 0 0 chr20 5428090 5428254 -66725628 - AluSp SINE Alu -14 299 136 201 147 0 0 chr20 5428267 5428301 -66725581 + (CAA)n Simple_repeat Simple_repeat 2 35 0 622 167 28 0 chr20 5428301 5428409 -66725473 - MER5A DNA MER1_type -75 114 4 253 118 0 0 chr20 5428784 5428818 -66725064 - MIR SINE MIR -150 112 79 1297 165 180 19 chr20 5428985 5429099 -66724783 + AluJo SINE Alu 1 95 -217 2256 136 0 0 chr20 5429099 5429408 -66724474 + AluSx SINE Alu 1 309 -3 1297 165 180 19 chr20 5429408 5429560 -66724322 + AluJo SINE Alu 95 310 -2 2257 115 0 0 chr20 5430009 5430305 -66723577 - AluSx SINE Alu -16 296 1 1652 188 20 3 chr20 5430314 5430606 -66723276 - AluJo SINE Alu -15 297 1 1626 180 6 60 chr20 5430618 5430934 -66722948 - AluJb SINE Alu -13 299 1 2284 107 10 13 chr20 5430970 5431279 -66722603 - AluSc SINE Alu 0 309 2 839 258 80 103 chr20 5431497 5431573 -66722309 + L1ME2 LINE L1 3375 3451 -2695 1664 93 14 0 chr20 5431573 5431789 -66722093 + AluSq SINE Alu 1 219 -94 839 258 80 103 chr20 5431789 5432197 -66721685 + L1ME2 LINE L1 3451 3848 -2298 673 86 0 32 chr20 5432201 5432294 -66721588 + AluSg/x SINE Alu 157 246 -63 1228 157 32 9 chr20 5432295 5432328 -66721554 + AluSg/x SINE Alu 83 114 -196 222 37 0 0 chr20 5432328 5432355 -66721527 + (TAAAA)n Simple_repeat Simple_repeat 2 28 0 1228 157 32 9 chr20 5432355 5432537 -66721345 + AluSg/x SINE Alu 114 303 -7 2274 113 7 0 chr20 5432541 5432851 -66721031 + AluSq SINE Alu 1 312 -1 408 73 0 0 chr20 5432852 5432920 -66720962 + AluSp/q SINE Alu 246 313 0 402 267 26 35 chr20 5432922 5433038 -66720844 + L1ME2 LINE L1 5152 5266 -880 180 0 0 0 chr20 5433046 5433066 -66720816 + (TTA)n Simple_repeat Simple_repeat 2 21 0 2340 94 17 0 chr20 5433095 5433392 -66720490 + AluSq SINE Alu 1 302 -11 252 267 88 13 chr20 5433418 5433620 -66720262 + L1ME2 LINE L1 5272 5485 -677 1952 147 0 66 chr20 5433646 5433779 -66720103 + AluJb SINE Alu 1 141 -171 1923 134 14 3 chr20 5433779 5434070 -66719812 - AluSx SINE Alu -17 295 2 1952 147 0 66 chr20 5434070 5434269 -66719613 + AluJb SINE Alu 141 311 -1 278 231 39 0 chr20 5434277 5434355 -66719527 - MLT1L LTR MaLR -13 602 522 825 205 12 6 chr20 5434361 5434527 -66719355 + AluJb SINE Alu 137 303 -9 644 303 59 28 chr20 5434996 5435048 -66718834 + L1ME2 LINE L1 5482 5531 -633 1995 148 10 3 chr20 5435048 5435346 -66718536 + AluJb SINE Alu 6 305 -7 849 119 0 37 chr20 5435350 5435484 -66718398 + FLAM_C SINE Alu 1 129 -4 644 303 59 28 chr20 5435484 5435881 -66718001 + L1ME2 LINE L1 5533 5931 -233 2061 142 3 3 chr20 5436059 5436362 -66717520 + AluSx SINE Alu 1 303 -9 488 253 177 0 chr20 5436517 5436675 -66717207 - MER5A DNA MER1_type 0 189 4 1672 65 28 0 chr20 5436938 5437153 -66716729 - AluSg/x SINE Alu -8 304 84 2435 75 6 40 chr20 5437248 5437570 -66716312 - AluSq SINE Alu -2 311 1 1086 98 0 0 chr20 5437573 5437705 -66716177 - AluSp SINE Alu -181 132 1 1899 166 13 0 chr20 5437804 5438105 -66715777 - AluJb SINE Alu -7 305 1 1777 174 13 23 chr20 5438630 5438934 -66714948 - AluJb SINE Alu -11 301 1 586 274 208 0 chr20 5439023 5439235 -66714647 + MIR SINE MIR 4 259 -3 457 279 104 13 chr20 5439240 5439394 -66714488 + MER5B DNA MER1_type 9 176 -2 2003 136 3 32 chr20 5439433 5439743 -66714139 - AluSq SINE Alu -12 301 1 2229 101 28 0 chr20 5440128 5440415 -66713467 + AluSg1 SINE Alu 1 295 -14 2298 93 0 7 chr20 5440436 5440736 -66713146 + AluSx SINE Alu 1 298 -14 3033 187 45 77 chr20 5440886 5441501 -66712381 + L1 LINE L1 3842 4424 -1722 2192 108 3 0 chr20 5441501 5441806 -66712076 + AluSp SINE Alu 1 306 -7 3033 187 45 77 chr20 5441806 5442033 -66711849 + L1 LINE L1 4424 4657 -1489 1083 107 0 47 chr20 5442208 5442377 -66711505 - AluSg/x SINE Alu -18 294 134 2010 94 40 0 chr20 5442377 5442652 -66711230 - AluSq SINE Alu -14 299 14 24 0 0 0 chr20 5442723 5442747 -66711135 + AT_rich Low_complexity Low_complexity 1 24 0 321 156 0 31 chr20 5442750 5442814 -66711068 - FRAM SINE Alu -67 99 38 387 220 2 2 chr20 5442818 5442895 -66710987 + AluJ/FLAM SINE Alu 2 66 -236 738 165 0 24 chr20 5442896 5443023 -66710859 + AluJo/FRAM SINE Alu 164 287 -25 389 152 0 0 chr20 5443048 5443114 -66710768 + FAM SINE Alu 114 179 0 238 65 22 22 chr20 5443150 5443196 -66710686 + (TAAAAA)n Simple_repeat Simple_repeat 5 50 0 1677 147 28 3 chr20 5443233 5443518 -66710364 - AluSx SINE Alu -18 294 3 313 223 80 63 chr20 5443618 5443793 -66710089 - L1MC4a LINE L1 -1788 6020 5843 1721 134 11 0 chr20 5443835 5444104 -66709778 - AluSx SINE Alu -5 307 36 290 266 64 18 chr20 5444142 5444251 -66709631 - HAL1b LINE L1 -776 572 459 305 278 93 96 chr20 5444255 5444361 -66709521 - HAL1b LINE L1 -931 417 312 1610 133 28 0 chr20 5444361 5444609 -66709273 - AluSx SINE Alu -11 301 47 305 278 93 96 chr20 5444609 5444772 -66709110 - HAL1b LINE L1 -1036 312 149 270 222 62 25 chr20 5444834 5444915 -66708967 - MLT1J LTR MaLR -35 476 393 706 119 336 0 chr20 5445447 5445590 -66708292 - AluSg/x SINE Alu -1 311 121 567 97 0 21 chr20 5445606 5445699 -66708183 - Alu SINE Alu 0 311 221 303 53 0 0 chr20 5445701 5445739 -66708143 - AluSq SINE Alu -132 171 134 2087 120 0 0 chr20 5445739 5446098 -66707784 - AluSg SINE Alu 0 310 1 2041 125 17 0 chr20 5446114 5446409 -66707473 - AluSx SINE Alu -12 300 1 737 208 100 50 chr20 5446439 5446680 -66707202 + MER63C DNA MER1_type 263 515 -415 378 143 48 0 chr20 5446673 5446736 -66707146 - AluJ/FRAM SINE Alu -8 294 229 * 855 161 0 0 chr20 5446736 5446873 -66707009 + AluSp/q SINE Alu 161 297 -16 620 215 29 67 chr20 5446873 5446936 -66706946 - MER63C DNA MER1_type -729 201 137 1227 164 97 53 chr20 5446936 5447139 -66706743 + AluJb SINE Alu 1 223 -89 2106 81 3 55 chr20 5447139 5447447 -66706435 + AluSp SINE Alu 1 292 -21 1227 164 97 53 chr20 5447447 5447542 -66706340 + AluJb SINE Alu 223 312 0 620 215 29 67 chr20 5447542 5447687 -66706195 - MER63C DNA MER1_type -793 137 1 264 30 0 0 chr20 5447755 5447788 -66706094 + (TG)n Simple_repeat Simple_repeat 2 34 0 776 204 0 0 chr20 5447788 5447925 -66705957 - AluJb SINE Alu -12 300 164 1637 96 5 0 chr20 5447925 5448145 -66705737 - AluSg/x SINE Alu -26 286 66 419 208 127 58 chr20 5448181 5448354 -66705528 + L2 LINE L2 2533 2717 -597 863 171 7 0 chr20 5448357 5448503 -66705379 + FRAM SINE Alu 1 146 -30 3368 102 22 0 chr20 5448509 5448970 -66704912 + MER11B LTR ERVK 1 471 -765 1098 123 6 28 chr20 5449026 5449205 -66704677 + MLT1B LTR MaLR 1 175 -215 1331 164 0 17 chr20 5449210 5449442 -66704440 + AluJo SINE Alu 1 228 -84 2060 122 30 0 chr20 5449454 5449758 -66704124 + AluSq SINE Alu 1 313 0 1431 121 22 9 chr20 5449758 5449971 -66703911 + MLT1B LTR MaLR 172 390 0 249 178 0 0 chr20 5449975 5450020 -66703862 + L2 LINE L2 2744 2788 -526 1013 90 0 0 chr20 5450663 5450796 -66703086 + AluSq/x SINE Alu 1 133 -180 1386 145 37 0 chr20 5450801 5451015 -66702867 + AluSg/x SINE Alu 81 302 -8 1820 234 38 20 chr20 5451017 5451060 -66702822 + LTR16A1 LTR ERVL 1 42 -415 1951 133 24 87 chr20 5451060 5451379 -66702503 - MLT1B LTR MaLR 0 390 101 2341 80 0 0 chr20 5451379 5451690 -66702192 + AluY SINE Alu 1 311 0 1951 133 24 87 chr20 5451690 5451783 -66702099 - MLT1B LTR MaLR -289 101 4 1820 234 38 20 chr20 5451783 5452188 -66701694 + LTR16A1 LTR ERVL 42 457 0 381 179 0 0 chr20 5452188 5452255 -66701627 - AluJ/FRAM SINE Alu -3 299 233 372 306 10 97 chr20 5452255 5452335 -66701547 + L3 LINE CR1 664 749 -828 764 134 118 0 chr20 5452335 5452454 -66701428 + FLAM_C SINE Alu 1 133 0 372 306 10 97 chr20 5452454 5452569 -66701313 + L3 LINE CR1 749 842 -735 2014 103 21 4 chr20 5452574 5452877 -66701005 - AluSq SINE Alu 0 308 1 1980 134 7 0 chr20 5452978 5453269 -66700613 - AluSx SINE Alu -18 294 2 1005 162 0 57 chr20 5453705 5453933 -66699949 + AluJo SINE Alu 1 215 -97 330 210 12 0 chr20 5454061 5454142 -66699740 - MLT1I LTR MaLR -4 405 324 617 165 9 0 chr20 5454148 5454257 -66699625 - AluJb SINE Alu -1 311 202 1304 173 54 30 chr20 5454605 5454759 -66699123 - AluJo SINE Alu -10 302 153 2090 107 26 13 chr20 5454759 5455067 -66698815 - AluSx SINE Alu 0 312 1 1304 173 54 30 chr20 5455067 5455207 -66698675 - AluJo SINE Alu -159 153 1 615 270 86 51 chr20 5455269 5455328 -66698554 - L1ME3A LINE L1 -220 5950 5895 2101 135 0 0 chr20 5455328 5455632 -66698250 - AluSx SINE Alu -8 304 1 615 270 86 51 chr20 5455632 5456038 -66697844 - L1ME3A LINE L1 -275 5895 5447 542 200 11 0 chr20 5456243 5456338 -66697544 - MER117 DNA MER1_type -42 155 60 533 213 11 0 chr20 5456348 5456442 -66697440 + MER5A DNA MER1_type 9 103 -86 491 338 18 31 chr20 5456554 5456782 -66697100 + L3 LINE CR1 594 818 -759 2220 95 3 7 chr20 5456934 5457238 -66696644 + AluSq SINE Alu 1 303 -10 884 132 0 22 chr20 5457249 5457385 -66696497 + FLAM_C SINE Alu 1 133 0 1695 157 0 24 chr20 5457469 5457756 -66696126 + AluJb SINE Alu 1 280 -32 203 0 37 0 chr20 5457756 5457783 -66696099 + (TAAA)n Simple_repeat Simple_repeat 4 31 0 285 251 164 47 chr20 5457899 5458070 -66695812 + L3 LINE CR1 967 1157 -420 2139 119 0 3 chr20 5458273 5458584 -66695298 - AluSx SINE Alu -2 310 1 278 367 0 0 chr20 5458591 5458689 -66695193 + L3 LINE CR1 1254 1351 -226 432 282 60 45 chr20 5458735 5458979 -66694903 + L1M4 LINE L1 2783 3022 -3124 2118 119 0 3 chr20 5458979 5459282 -66694600 + AluSx SINE Alu 1 302 -10 2243 82 3 0 chr20 5459290 5459584 -66694298 + AluSp SINE Alu 1 295 -18 432 282 60 45 chr20 5459584 5459879 -66694003 + L1M4 LINE L1 3028 3339 -2807 853 149 0 8 chr20 5459884 5460018 -66693864 + FLAM_C SINE Alu 1 133 -10 241 188 0 0 chr20 5460035 5460083 -66693799 + L1M LINE L1 5346 5393 -787 212 264 58 97 chr20 5460084 5460133 -66693749 + L3 LINE CR1 1338 1387 -190 811 147 16 8 chr20 5460133 5460262 -66693620 + FLAM_C SINE Alu 2 131 -2 212 264 58 97 chr20 5460262 5460367 -66693515 + L3 LINE CR1 1387 1486 -91 2153 83 17 20 chr20 5461385 5461685 -66692197 + AluSx SINE Alu 3 301 -11 655 305 121 23 chr20 5461965 5462313 -66691569 - LTR16C LTR ERVL -1 490 109 450 0 0 0 chr20 5462406 5462456 -66691426 + (TA)n Simple_repeat Simple_repeat 2 51 0 2015 107 11 0 chr20 5462456 5462736 -66691146 - AluSg SINE Alu -27 283 1 1704 158 10 30 chr20 5462758 5463061 -66690821 - AluJb SINE Alu -15 297 1 534 193 39 180 chr20 5463134 5463323 -66690559 - MLT1J LTR MaLR -243 268 138 2043 138 29 35 chr20 5463323 5463699 -66690183 - THE1C LTR MaLR -1 374 1 534 193 39 180 chr20 5463699 5463820 -66690062 - MLT1J LTR MaLR -373 138 2 274 133 0 33 chr20 5464637 5464697 -66689185 + (TTCCC)n Simple_repeat Simple_repeat 1 58 0 1991 137 7 0 chr20 5464697 5465004 -66688878 - AluSx SINE Alu -2 310 2 728 264 127 75 chr20 5465008 5465473 -66688409 + MLT1H1 LTR MaLR 65 553 -2 720 209 16 0 chr20 5465765 5465894 -66687988 - AluJb SINE Alu -13 299 169 2259 80 7 0 chr20 5466338 5466640 -66687242 + AluSq SINE Alu 1 304 -9 1973 112 10 36 chr20 5466742 5467046 -66686836 - AluSx SINE Alu -16 296 1 1579 171 3 30 chr20 5467046 5467351 -66686531 - AluJo SINE Alu -15 297 1 2319 87 0 0 chr20 5467562 5467871 -66686011 + AluSx SINE Alu 1 309 -3 511 263 119 34 chr20 5467935 5468171 -66685711 - LTR16C LTR ERVL -3 488 233 480 188 10 20 chr20 5468714 5468815 -66685067 + MER34C LTR ERV1 37 136 -449 2368 144 37 0 chr20 5468837 5469220 -66684662 - MSTB LTR MaLR -29 397 1 758 225 81 101 chr20 5469220 5469651 -66684231 + MER34 LTR ERV1 100 521 -21 810 165 8 0 chr20 5469652 5469785 -66684097 + AluJo SINE Alu 1 134 -178 754 176 7 29 chr20 5469822 5469958 -66683924 - FLAM_C SINE Alu 0 133 1 2322 84 3 0 chr20 5470062 5470360 -66683522 - AluSp SINE Alu -14 299 1 2079 115 0 10 chr20 5470437 5470751 -66683131 + AluSx SINE Alu 1 311 -1 1585 144 8 19 chr20 5470853 5471117 -66682765 + AluJb SINE Alu 35 295 -17 2103 104 10 3 chr20 5471254 5471563 -66682319 + AluSx SINE Alu 1 311 -1 2279 102 0 0 chr20 5471669 5471973 -66681909 - AluSx SINE Alu -8 304 1 1881 137 0 7 chr20 5472019 5472328 -66681554 + AluJo SINE Alu 1 307 0 337 276 35 0 chr20 5472330 5472417 -66681465 - L2 LINE L2 -14 3299 3210 921 100 46 0 chr20 5472418 5472548 -66681334 + AluSq/x SINE Alu 1 136 -176 1885 144 3 0 chr20 5472549 5472840 -66681042 + AluSx SINE Alu 3 294 -18 279 311 61 30 chr20 5472840 5472972 -66680910 - L2 LINE L2 -94 3219 3084 999 169 0 45 chr20 5473146 5473324 -66680558 + MER45A DNA AcHobo 8 177 -1 641 248 64 5 chr20 5473468 5473764 -66680118 - MLT1I LTR MaLR 0 409 52 892 146 0 14 chr20 5473794 5473938 -66679944 - AluJb SINE Alu -23 289 148 433 244 87 74 chr20 5473964 5474150 -66679732 - L1M4 LINE L1 -1219 4927 4745 761 177 8 0 chr20 5474150 5474280 -66679602 - FLAM_A SINE Alu 0 133 3 433 244 87 74 chr20 5474280 5474483 -66679399 - L1M4 LINE L1 -1401 4745 4533 845 162 101 0 chr20 5474487 5474635 -66679247 - FRAM SINE Alu -3 163 1 1105 167 0 0 chr20 5474744 5474930 -66678952 - AluJb SINE Alu -6 306 121 337 327 137 24 chr20 5475052 5475220 -66678662 - L1M4 LINE L1 -1717 4429 4243 1653 138 98 0 chr20 5475559 5475835 -66678047 - AluSx SINE Alu -9 303 1 549 262 283 0 chr20 5475890 5476134 -66677748 + MER5C DNA MER1_type 11 323 -1 1950 105 38 42 chr20 5476857 5477170 -66676712 - AluSx SINE Alu 0 312 1 1138 165 0 0 chr20 5477228 5477416 -66676466 - AluJb SINE Alu -4 308 121 1993 128 0 7 chr20 5477441 5477739 -66676143 - AluSx SINE Alu -16 296 1 2281 94 0 0 chr20 5477915 5478223 -66675659 - AluSq SINE Alu -5 308 1 198 0 0 0 chr20 5478281 5478303 -66675579 + (T)n Simple_repeat Simple_repeat 1 22 0 446 115 52 62 chr20 5478303 5478399 -66675483 - LTR9 LTR ERV1 -86 526 432 356 186 0 35 chr20 5478425 5478511 -66675371 - L1M4 LINE L1 -2196 3950 3868 343 338 40 59 chr20 5478566 5478844 -66675038 - L1M4 LINE L1 -2368 3778 3496 2397 133 2 84 chr20 5478844 5479222 -66674660 - L1PA15 LINE L1 -2 6163 5756 2267 89 0 0 chr20 5479222 5479514 -66674368 - AluSg SINE Alu -15 295 4 2397 133 2 84 chr20 5479514 5479527 -66674355 - L1PA15 LINE L1 -409 5756 5810 2192 103 3 0 chr20 5479527 5479829 -66674053 - AluSx SINE Alu -9 303 1 2397 133 2 84 chr20 5479829 5479887 -66673995 - L1PA15 LINE L1 -354 5811 5750 343 338 40 59 chr20 5479887 5480022 -66673860 - L1M4 LINE L1 -2650 3496 3376 2175 117 10 0 chr20 5480272 5480581 -66673301 - AluSx SINE Alu 0 312 1 966 91 15 15 chr20 5481109 5481241 -66672641 + FLAM_C SINE Alu 2 133 0 2240 96 0 3 chr20 5481251 5481563 -66672319 + AluSx SINE Alu 1 311 -1 1027 190 0 0 chr20 5481688 5481862 -66672020 - AluJb SINE Alu -5 307 134 1703 179 3 0 chr20 5481862 5482169 -66671713 - AluJo SINE Alu -4 308 1 412 171 118 0 chr20 5482497 5482573 -66671309 - AluSg/x SINE Alu -19 291 207 198 0 0 0 chr20 5482692 5482714 -66671168 + (T)n Simple_repeat Simple_repeat 1 22 0 1214 131 0 0 chr20 5482813 5482988 -66670894 - AluSx SINE Alu -137 175 1 2293 93 0 0 chr20 5483022 5483324 -66670558 + AluSx SINE Alu 1 302 -10 405 133 0 17 chr20 5483488 5483548 -66670334 - AluJ/FLAM SINE Alu -249 63 5 1338 156 31 35 chr20 5483552 5483809 -66670073 - AluJo SINE Alu -56 256 1 258 178 0 0 chr20 5483928 5483973 -66669909 - L2 LINE L2 -605 2709 2665 2075 121 0 3 chr20 5484088 5484394 -66669488 + AluY SINE Alu 1 305 -6 1960 152 0 3 chr20 5484413 5484722 -66669160 + AluSx SINE Alu 1 308 -4 1700 96 69 4 chr20 5484749 5485031 -66668851 + AluSx SINE Alu 7 305 0 934 218 131 33 chr20 5485033 5485460 -66668422 + HAL1 LINE L1 1103 1571 -936 1059 281 67 17 chr20 5485530 5486006 -66667876 + HAL1 LINE L1 1958 2457 -50 1043 159 11 0 chr20 5486006 5486182 -66667700 - AluJo SINE Alu -22 290 113 2009 112 35 0 chr20 5486219 5486506 -66667376 - AluSp SINE Alu -16 297 1 479 177 0 13 chr20 5486526 5486605 -66667277 + MER2 DNA MER2_type 268 345 0 2380 161 53 95 chr20 5487379 5487431 -66666451 + L1 LINE L1 3827 3880 -2266 2263 74 10 0 chr20 5487431 5487728 -66666154 + AluSp SINE Alu 1 300 -13 2380 161 53 95 chr20 5487728 5488239 -66665643 + L1 LINE L1 3880 4411 -1735 1716 153 37 0 chr20 5488239 5488533 -66665349 - AluJb SINE Alu -4 308 4 1897 130 3 7 chr20 5488534 5488833 -66665049 - AluSx SINE Alu -14 298 1 2380 161 53 95 chr20 5488833 5488910 -66664972 + L1 LINE L1 4410 4443 -1703 2191 97 0 16 chr20 5488942 5489252 -66664630 - AluSg SINE Alu -5 305 1 1214 184 68 43 chr20 5489252 5489422 -66664460 - AluJo SINE Alu -15 287 106 2196 96 7 0 chr20 5489422 5489724 -66664158 + AluSg SINE Alu 1 304 -6 1214 184 68 43 chr20 5489724 5489831 -66664051 - AluJo SINE Alu -196 106 3 393 289 147 19 chr20 5490679 5490835 -66663047 - MER5A DNA MER1_type 0 189 14 439 200 78 17 chr20 5491266 5491381 -66662501 - MIR SINE MIR -24 238 117 187 237 303 0 chr20 5491823 5491899 -66661983 - L2 LINE L2 -5 3267 3169 334 280 49 21 chr20 5492267 5492410 -66661472 + L3 LINE CR1 1112 1258 -319 1947 97 100 0 chr20 5492626 5492905 -66660977 - AluSx SINE Alu -5 307 1 2313 92 13 0 chr20 5492965 5493270 -66660612 - AluSp SINE Alu -4 309 1 636 124 0 0 chr20 5493382 5493471 -66660411 - 5S rRNA rRNA -31 90 2 201 345 26 9 chr20 5493471 5493584 -66660298 + L3 LINE CR1 1284 1398 -179 832 218 0 0 chr20 5494040 5494257 -66659625 + FRAM SINE Alu 1 81 0 732 237 167 31 chr20 5494455 5494742 -66659140 + L2 LINE L2 2135 2460 -854 23 33 0 0 chr20 5495382 5495412 -66658470 + AT_rich Low_complexity Low_complexity 1 30 0 230 210 24 99 chr20 5496251 5496384 -66657498 - L1M3 LINE L1 -367 5813 5689 1805 176 3 25 chr20 5496404 5496723 -66657159 - AluJo SINE Alu 0 312 1 2427 181 25 23 chr20 5497257 5497404 -66656478 + L1MA3 LINE L1 3423 3568 -2578 1857 171 7 0 chr20 5497404 5497708 -66656174 + AluJb SINE Alu 1 306 -6 2427 181 25 23 chr20 5497708 5498078 -66655804 + L1MA3 LINE L1 3568 3941 -2205 1308 127 97 158 chr20 5498079 5498179 -66655703 + AluJb SINE Alu 3 107 -205 1531 184 0 8 chr20 5498179 5498429 -66655453 + AluJo SINE Alu 5 252 -60 1308 127 97 158 chr20 5498429 5498658 -66655224 + AluJb SINE Alu 107 312 0 5884 104 73 64 chr20 5498662 5499237 -66654645 + L1MA3 LINE L1 4873 5441 -864 882 93 0 0 chr20 5499237 5499355 -66654527 - FLAM_C SINE Alu -15 118 1 5884 104 73 64 chr20 5499355 5499998 -66653884 + L1MA3 LINE L1 5441 6076 -229 1864 153 0 3 chr20 5499998 5500286 -66653596 + AluSx SINE Alu 1 287 -25 5884 104 73 64 chr20 5500286 5500342 -66653540 + L1MA3 LINE L1 6076 6130 -175 1453 124 200 0 chr20 5500342 5500592 -66653290 + AluSg SINE Alu 1 300 0 5884 104 73 64 chr20 5500592 5500745 -66653137 + L1MA3 LINE L1 6130 6305 0 1577 133 53 93 chr20 5500752 5501054 -66652828 + AluJb SINE Alu 1 290 -22 414 39 0 0 chr20 5501070 5501122 -66652760 + (CA)n Simple_repeat Simple_repeat 2 53 0 2314 99 0 10 chr20 5501390 5501702 -66652180 - AluSq SINE Alu -4 309 1 1967 149 0 7 chr20 5501714 5502003 -66651879 - AluJo SINE Alu -25 287 1 1846 137 4 0 chr20 5502029 5502299 -66651583 + AluJb SINE Alu 15 285 -27 1209 195 0 0 chr20 5502630 5502825 -66651057 + AluJb SINE Alu 104 298 -14 1948 137 3 7 chr20 5502825 5503131 -66650751 + AluSx SINE Alu 1 305 0 2336 103 3 0 chr20 5503133 5503443 -66650439 + AluSp SINE Alu 1 311 -2 187 303 30 40 chr20 5504765 5504864 -66649018 - MIR3 SINE MIR -105 103 6 1378 152 0 25 chr20 5505037 5505281 -66648601 - AluSg/x SINE Alu 0 312 75 1995 131 28 0 chr20 5505283 5505574 -66648308 - AluSx SINE Alu -13 299 1 2182 133 0 0 chr20 5505895 5506195 -66647687 + AluSx SINE Alu 1 300 -12 2330 113 0 0 chr20 5506324 5506634 -66647248 + AluSg SINE Alu 1 310 0 2268 97 3 6 chr20 5506833 5507144 -66646738 - AluSg SINE Alu 0 310 1 418 254 56 0 chr20 5508699 5508825 -66645057 - L1ME1 LINE L1 -52 6114 5982 532 157 12 0 chr20 5509001 5509084 -66644798 - HY4 scRNA scRNA -9 84 1 2099 111 21 17 chr20 5509089 5509377 -66644505 - AluSx SINE Alu -22 290 2 1269 195 99 64 chr20 5510664 5511151 -66642731 + L1MC5 LINE L1 6971 7474 -487 1060 166 11 6 chr20 5511184 5511359 -66642523 + FRAM SINE Alu 1 176 0 232 252 81 41 chr20 5511505 5511628 -66642254 - MIR SINE MIR -3 259 132 1403 143 0 0 chr20 5511655 5511858 -66642024 - AluSg/x SINE Alu -14 296 94 212 297 27 36 chr20 5511971 5512082 -66641800 + MIR SINE MIR 84 193 -69 1099 184 20 33 chr20 5513301 5513546 -66640336 + AluJo SINE Alu 55 296 -16 449 134 24 0 chr20 5514169 5514251 -66639631 + FLAM_A SINE Alu 44 127 -15 2160 84 0 53 chr20 5515800 5516123 -66637759 - AluSx SINE Alu 0 307 1 275 297 66 0 chr20 5516288 5516379 -66637503 - L1MEd LINE L1 -4895 1224 1128 207 100 0 0 chr20 5516379 5516409 -66637473 + (T)n Simple_repeat Simple_repeat 1 30 0 1270 162 160 46 chr20 5516560 5516625 -66637257 - HsTC2 DNA Tc2 -15 1883 1827 1586 187 17 7 chr20 5516625 5516925 -66636957 - AluJo SINE Alu -9 303 1 1270 162 160 46 chr20 5516925 5516970 -66636912 - HsTC2 DNA Tc2 -71 1827 1789 2407 110 0 0 chr20 5516970 5517280 -66636602 - AluSx SINE Alu 0 312 3 1270 162 160 46 chr20 5517280 5517562 -66636320 - HsTC2 DNA Tc2 -109 1789 1269 1194 234 45 6 chr20 5517559 5517871 -66636011 - HsTC2 DNA Tc2 -1385 513 190 * 330 273 186 51 chr20 5517996 5518230 -66635652 - L2 LINE L2 -255 3058 2793 2347 96 0 0 chr20 5518417 5518710 -66635172 + AluSx SINE Alu 5 297 -15 328 236 64 9 chr20 5518904 5519014 -66634868 - MLT1K LTR MaLR 0 588 473 724 296 58 10 chr20 5519038 5519329 -66634553 + L1ME LINE L1 5378 5682 -439 2211 96 30 3 chr20 5519354 5519657 -66634225 + AluSq SINE Alu 1 311 -2 1064 182 0 6 chr20 5520060 5520236 -66633646 + AluJo SINE Alu 4 178 -134 952 123 0 0 chr20 5520341 5520471 -66633411 + FLAM_C SINE Alu 2 131 -2 35 63 0 0 chr20 5520471 5520534 -66633348 + AT_rich Low_complexity Low_complexity 1 63 0 272 267 40 10 chr20 5520706 5520807 -66633075 + MIR SINE MIR 2 105 -157 1822 68 124 8 chr20 5520952 5521201 -66632681 + AluSg SINE Alu 1 278 -32 267 31 0 0 chr20 5521204 5521236 -66632646 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 241 277 0 48 chr20 5521288 5521371 -66632511 + MIR SINE MIR 176 254 -8 203 240 20 0 chr20 5521703 5521753 -66632129 + (CCCCG)n Simple_repeat Simple_repeat 4 54 0 27 29 0 0 chr20 5521973 5522007 -66631875 + GC_rich Low_complexity Low_complexity 1 34 0 357 287 74 8 chr20 5523099 5523221 -66630661 + Charlie8 DNA MER1_type 93 222 -2195 558 141 0 0 chr20 5523499 5523584 -66630298 + FLAM_A SINE Alu 1 85 -57 2197 107 0 26 chr20 5524275 5524444 -66629438 - AluSg SINE Alu -10 300 141 2144 121 7 0 chr20 5524444 5524741 -66629141 - AluSp SINE Alu -13 300 2 2197 107 0 26 chr20 5524741 5524879 -66629003 - AluSg SINE Alu -169 141 1 2284 91 0 7 chr20 5524957 5525275 -66628607 - AluSq SINE Alu 0 316 1 2266 75 3 36 chr20 5525495 5525802 -66628080 + AluSp SINE Alu 1 297 -16 2573 53 0 7 chr20 5525810 5526112 -66627770 + AluY SINE Alu 1 300 -11 387 319 65 23 chr20 5526689 5526905 -66626977 + MIR SINE MIR 11 235 -27 2171 129 0 0 chr20 5527103 5527398 -66626484 - AluSx SINE Alu -17 295 1 2079 71 27 37 chr20 5527891 5528187 -66625695 + AluY SINE Alu 1 293 -18 979 180 0 6 chr20 5528257 5528418 -66625464 - AluJo SINE Alu -17 295 136 223 333 0 0 chr20 5528426 5528504 -66625378 - MIR SINE MIR -64 144 67 2228 95 10 3 chr20 5528530 5528825 -66625057 - AluSp SINE Alu -16 297 1 2375 112 0 0 chr20 5529509 5529821 -66624061 - AluSq SINE Alu -1 312 1 22 0 0 0 chr20 5530084 5530106 -66623776 + AT_rich Low_complexity Low_complexity 1 22 0 636 130 104 9 chr20 5530112 5530227 -66623655 - AluJo SINE Alu -185 127 2 1914 169 32 9 chr20 5531786 5532129 -66621753 - L1PA15 LINE L1 -4 6161 5811 2217 112 3 0 chr20 5532249 5532543 -66621339 - AluSx SINE Alu -17 295 1 829 83 83 38 chr20 5532640 5532773 -66621109 + AluJo SINE Alu 112 250 -62 2384 86 3 0 chr20 5532796 5533097 -66620785 - AluY SINE Alu -9 302 1 848 153 15 0 chr20 5533119 5533250 -66620632 - FLAM_C SINE Alu 0 133 1 1254 135 13 26 chr20 5533250 5533468 -66620414 - L1 LINE L1 -1149 4997 4781 1966 136 0 0 chr20 5533489 5533762 -66620120 - AluSq SINE Alu -16 297 25 612 95 0 0 chr20 5533764 5533848 -66620034 + AluSp/q SINE Alu 176 259 -54 237 154 0 0 chr20 5533848 5533887 -66619995 + L1 LINE L1 4547 4585 -1561 1069 138 0 0 chr20 5533901 5534060 -66619822 + L1 LINE L1 4639 4797 -1349 1824 142 0 65 chr20 5534060 5534384 -66619498 + AluSx SINE Alu 1 303 -9 2673 150 20 16 chr20 5534384 5534800 -66619082 - L1 LINE L1 -1817 4329 3909 2215 103 0 10 chr20 5534800 5535102 -66618780 - AluSx SINE Alu -13 299 1 2673 150 20 16 chr20 5535102 5535173 -66618709 - L1 LINE L1 -2237 3909 3840 311 244 68 27 chr20 5535152 5535373 -66618509 - L1ME LINE L1 -295 5826 5555 * 260 213 33 0 chr20 5535533 5535594 -66618288 + MIR SINE MIR 114 176 -86 792 220 157 33 chr20 5535597 5535897 -66617985 + L1MC5 LINE L1 7044 7380 -581 2630 175 62 161 chr20 5535957 5536930 -66616952 + MER21A LTR ERV1 39 914 -17 604 162 8 43 chr20 5537041 5537158 -66616724 + FLAM_C SINE Alu 13 125 -18 2162 130 0 0 chr20 5537165 5537457 -66616425 + AluSx SINE Alu 1 292 -20 264 218 122 20 chr20 5537460 5537607 -66616275 + L1MC5 LINE L1 7520 7681 -280 1750 239 72 18 chr20 5537628 5537853 -66616029 + L1ME LINE L1 5103 5314 -856 1766 155 41 3 chr20 5537853 5538144 -66615738 - AluJo SINE Alu -10 302 1 1750 239 72 18 chr20 5538144 5538540 -66615342 + L1ME LINE L1 5314 5746 -424 530 87 0 0 chr20 5538538 5538607 -66615275 - L1M3 LINE L1 -463 5720 5652 * 413 431 3 122 chr20 5538627 5538753 -66615129 - AluSx SINE Alu 0 302 163 2081 149 0 0 chr20 5538753 5539061 -66614821 - AluSx SINE Alu 0 312 5 413 431 3 122 chr20 5539061 5539277 -66614605 - AluSx SINE Alu -139 163 1 2210 87 10 7 chr20 5539839 5540127 -66613755 - AluSx SINE Alu -23 289 1 23 0 0 0 chr20 5540685 5540708 -66613174 + AT_rich Low_complexity Low_complexity 1 23 0 278 256 37 12 chr20 5540767 5540849 -66613033 + L2 LINE L2 1365 1448 -1866 893 70 118 0 chr20 5541216 5541371 -66612511 + MER30 DNA MER1_type 1 195 -35 2039 91 91 3 chr20 5541463 5541749 -66612133 + AluY SINE Alu 1 311 0 416 317 53 18 chr20 5542422 5542649 -66611233 - L1ME LINE L1 -511 5659 5425 1163 173 61 78 chr20 5542710 5542751 -66611131 - L1ME LINE L1 -429 5737 5697 1677 184 0 33 chr20 5542751 5543055 -66610827 + AluJo SINE Alu 1 294 -18 1766 167 27 0 chr20 5543065 5543358 -66610524 + AluJb SINE Alu 11 311 -1 1163 173 61 78 chr20 5543358 5543600 -66610282 - L1ME LINE L1 -478 5688 5448 2330 92 3 29 chr20 5543610 5543916 -66609966 - AluSp SINE Alu -15 298 1 1015 128 0 0 chr20 5544117 5544258 -66609624 + AluJb SINE Alu 1 141 -171 2416 90 0 0 chr20 5544926 5545226 -66608656 - AluSx SINE Alu -12 300 1 219 69 0 0 chr20 5545233 5545262 -66608620 + (T)n Simple_repeat Simple_repeat 1 29 0 1375 195 17 31 chr20 5545380 5545672 -66608210 - AluJo SINE Alu -24 288 1 2526 84 3 0 chr20 5545738 5546047 -66607835 + AluSp SINE Alu 1 310 -3 439 223 46 23 chr20 5546061 5546194 -66607688 - MLT1J LTR MaLR -292 158 55 1659 178 7 7 chr20 5547051 5547338 -66606544 - AluJb SINE Alu -25 287 1 378 0 0 0 chr20 5547446 5547488 -66606394 + (TG)n Simple_repeat Simple_repeat 2 43 0 1335 199 27 40 chr20 5547571 5547872 -66606010 - AluJo SINE Alu -11 301 5 2348 98 0 9 chr20 5548116 5548431 -66605451 - AluSx SINE Alu 0 312 1 2055 153 7 0 chr20 5548931 5549239 -66604643 - AluSx SINE Alu -2 310 1 22 56 0 0 chr20 5549486 5549522 -66604360 + AT_rich Low_complexity Low_complexity 1 36 0 2127 124 0 0 chr20 5549522 5549820 -66604062 - AluSc SINE Alu -11 298 1 2228 99 21 0 chr20 5549820 5550103 -66603779 - AluSg SINE Alu -21 289 1 494 293 82 37 chr20 5550330 5550685 -66603197 - HAL1b LINE L1 -774 574 204 2331 110 3 3 chr20 5550714 5551024 -66602858 - AluSx SINE Alu -2 310 1 1115 214 53 29 chr20 5551035 5551316 -66602566 - L1MB7 LINE L1 0 6184 5897 350 298 6 6 chr20 5553066 5553224 -66600658 + (TG)n Simple_repeat Simple_repeat 1 158 0 2268 114 0 7 chr20 5553534 5553842 -66600040 - AluSx SINE Alu -6 306 1 361 204 83 0 chr20 5555174 5555263 -66598619 + MIR SINE MIR 95 191 -60 21 0 0 0 chr20 5555856 5555877 -66598005 + AT_rich Low_complexity Low_complexity 1 21 0 450 296 23 0 chr20 5557122 5557254 -66596628 + MER112 DNA MER1_type 115 249 -11 1602 146 103 0 chr20 5557262 5557552 -66596330 + AluJo SINE Alu 1 317 0 2353 97 0 0 chr20 5558309 5558608 -66595274 + AluSg1 SINE Alu 1 299 -10 622 228 123 78 chr20 5558730 5559143 -66594739 - L1ME3 LINE L1 -59 6103 5672 1886 163 0 23 chr20 5559154 5559460 -66594422 - AluJb SINE Alu -13 299 1 676 162 103 0 chr20 5559784 5559901 -66593981 - FLAM_C SINE Alu -13 130 2 189 0 0 0 chr20 5560450 5560471 -66593411 + (T)n Simple_repeat Simple_repeat 1 21 0 183 196 294 0 chr20 5560504 5560555 -66593327 + MER5B DNA MER1_type 2 67 -111 386 122 0 144 chr20 5561060 5561126 -66592756 - L1MB1 LINE L1 0 6168 6136 1993 129 4 0 chr20 5561126 5561405 -66592477 - AluSx SINE Alu -12 300 21 386 122 0 144 chr20 5561405 5561444 -66592438 - L1MB1 LINE L1 -32 6136 6093 760 171 0 79 chr20 5561451 5561603 -66592279 - AluJo SINE Alu -171 141 2 1199 150 34 49 chr20 5561607 5561677 -66592205 - L1MB1 LINE L1 -68 6100 6030 2201 119 0 0 chr20 5561677 5561971 -66591911 - AluSx SINE Alu -17 295 2 1199 150 34 49 chr20 5561971 5562162 -66591720 - L1MB1 LINE L1 -138 6030 5837 1705 173 14 7 chr20 5562527 5562811 -66591071 - AluJb SINE Alu -26 286 1 369 336 43 26 chr20 5562862 5563094 -66590788 - L1M4 LINE L1 -1539 4607 4372 441 210 134 8 chr20 5563129 5563248 -66590634 - MER58C DNA MER1_type -38 177 44 761 177 39 0 chr20 5563755 5563885 -66589997 - AluJo SINE Alu -176 136 2 2192 69 62 14 chr20 5564221 5564511 -66589371 + AluSp SINE Alu 1 304 -9 1967 134 46 0 chr20 5564531 5564815 -66589067 + AluJb SINE Alu 4 300 -12 307 261 23 0 chr20 5565172 5565260 -66588622 + MIR SINE MIR 52 141 -121 809 141 0 16 chr20 5566259 5566387 -66587495 + FLAM_A SINE Alu 1 126 -7 2514 48 0 26 chr20 5567016 5567329 -66586553 - AluY SINE Alu -6 305 1 2600 69 0 0 chr20 5567634 5567940 -66585942 - AluY SINE Alu -5 306 1 2271 98 3 3 chr20 5567970 5568266 -66585616 - AluSq SINE Alu -17 296 1 962 200 118 0 chr20 5568449 5568644 -66585238 - MER20 DNA MER1_type -1 218 1 1995 114 0 89 chr20 5569198 5569523 -66584359 - AluSx SINE Alu -15 297 2 804 201 106 0 chr20 5569633 5569822 -66584060 - MER3 DNA MER1_type 0 209 1 1788 175 0 38 chr20 5571049 5571369 -66582513 - AluJb SINE Alu -2 310 3 1369 179 0 36 chr20 5571495 5571746 -66582136 - AluJo SINE Alu -24 288 47 228 67 0 0 chr20 5571750 5571780 -66582102 + (T)n Simple_repeat Simple_repeat 1 30 0 36 77 0 0 chr20 5571793 5571871 -66582011 + AT_rich Low_complexity Low_complexity 1 78 0 465 262 87 0 chr20 5571871 5571997 -66581885 - FRAM SINE Alu -31 145 9 2285 97 7 0 chr20 5572019 5572309 -66581573 - AluSx SINE Alu -20 292 1 1865 147 3 46 chr20 5573550 5573876 -66580006 - AluJb SINE Alu 0 312 1 1635 190 0 7 chr20 5574505 5574794 -66579088 + AluJo SINE Alu 1 287 -25 625 221 59 0 chr20 5575595 5575731 -66578151 - MER3 DNA MER1_type 0 209 66 225 65 0 0 chr20 5576314 5576345 -66577537 + (A)n Simple_repeat Simple_repeat 1 31 0 262 279 69 48 chr20 5577316 5577535 -66576347 - L2 LINE L2 0 3272 3042 476 273 106 48 chr20 5577572 5577648 -66576234 - L2 LINE L2 -34 3279 3209 1599 173 34 20 chr20 5577648 5577943 -66575939 - AluJo SINE Alu -13 299 1 476 273 106 48 chr20 5577943 5578177 -66575705 - L2 LINE L2 -104 3209 2951 318 26 0 0 chr20 5579564 5579603 -66574279 + (TCCC)n Simple_repeat Simple_repeat 4 42 0 884 122 0 0 chr20 5579606 5579721 -66574161 - FLAM_C SINE Alu -28 115 1 21 36 0 0 chr20 5579725 5579753 -66574129 + AT_rich Low_complexity Low_complexity 1 28 0 180 0 0 0 chr20 5579982 5580002 -66573880 + (TG)n Simple_repeat Simple_repeat 1 20 0 1981 125 10 17 chr20 5580003 5580300 -66573582 - AluSx SINE Alu -17 295 1 1886 147 32 38 chr20 5581223 5581536 -66572346 - AluJb SINE Alu -1 311 1 1191 280 70 51 chr20 5582148 5582590 -66571292 - L1MC4a LINE L1 -1921 5887 5432 2219 94 0 0 chr20 5582590 5582867 -66571015 - AluSx SINE Alu -35 277 1 1191 280 70 51 chr20 5582867 5582949 -66570933 - L1MC4a LINE L1 -2376 5432 5353 1690 140 142 11 chr20 5585859 5586177 -66567705 - MER47A DNA MER2_type 0 366 4 639 182 84 28 chr20 5586287 5586430 -66567452 - L1MB5 LINE L1 0 6174 6024 2318 113 0 0 chr20 5586869 5587180 -66566702 - AluSx SINE Alu -1 311 1 283 255 172 25 chr20 5587351 5587508 -66566374 - L1ME4a LINE L1 -1 6120 5941 463 295 82 75 chr20 5587759 5587804 -66566078 - L1MC4a LINE L1 -298 5823 5780 1512 157 98 0 chr20 5587804 5588085 -66565797 - AluSx SINE Alu 0 308 3 463 295 82 75 chr20 5588085 5588656 -66565226 - L1MC4a LINE L1 -341 5780 5257 2328 105 0 10 chr20 5588919 5589255 -66564627 + AluSx SINE Alu 1 312 0 318 236 90 28 chr20 5589255 5589390 -66564492 - L1ME4a LINE L1 -387 5734 5588 189 0 0 0 chr20 5590157 5590178 -66563704 + (T)n Simple_repeat Simple_repeat 1 21 0 385 281 168 0 chr20 5590261 5590464 -66563418 + MIR SINE MIR 13 249 -13 1642 171 25 29 chr20 5590703 5591017 -66562865 + AluJo SINE Alu 3 315 0 2053 136 0 16 chr20 5592110 5592418 -66561464 + AluSx SINE Alu 1 303 -9 2074 138 0 13 chr20 5592451 5592755 -66561127 - AluSx SINE Alu -12 300 1 1972 132 10 10 chr20 5592992 5593281 -66560601 + AluSx SINE Alu 3 291 -21 991 146 73 26 chr20 5593490 5593682 -66560200 + MER46A DNA MER2_type 14 214 -22 846 179 72 175 chr20 5593731 5593908 -66559974 - L1MC4 LINE L1 -76 7966 7772 1818 138 10 21 chr20 5593908 5594199 -66559683 - AluSx SINE Alu -24 288 1 846 179 72 175 chr20 5594199 5594552 -66559330 - L1MC4 LINE L1 -270 7772 7491 286 226 71 0 chr20 5594530 5594614 -66559268 - L1ME4a LINE L1 -2371 5437 5348 * 351 257 154 78 chr20 5594883 5595430 -66558452 - L1M2 LINE L1 -1131 2078 1757 276 263 93 57 chr20 5595447 5595641 -66558241 - HAL1 LINE L1 -1688 819 619 1893 106 48 27 chr20 5596199 5596492 -66557390 - AluSx SINE Alu -3 309 11 1483 185 21 11 chr20 5596503 5596790 -66557092 - AluJo SINE Alu -22 290 1 684 273 114 0 chr20 5596933 5597109 -66556773 + MER58A DNA MER1_type 24 219 -5 2064 128 20 0 chr20 5597710 5598008 -66555874 - AluSx SINE Alu -8 304 1 2367 197 108 43 chr20 5598288 5598716 -66555166 - MER77 LTR ERV1 -4 601 126 656 188 8 0 chr20 5598716 5598833 -66555049 - FLAM_C SINE Alu -15 118 1 2367 197 108 43 chr20 5598833 5598968 -66554914 - MER77 LTR ERV1 -479 126 1 1725 162 28 0 chr20 5600542 5600826 -66553056 + AluJb SINE Alu 1 292 -20 335 298 118 32 chr20 5602202 5602548 -66551334 + L1M4 LINE L1 3582 3957 -2189 1626 170 6 19 chr20 5602674 5602991 -66550891 + AluSq SINE Alu 1 313 0 208 139 0 28 chr20 5604194 5604230 -66549652 + (TCTCC)n Simple_repeat Simple_repeat 4 38 0 193 167 185 19 chr20 5607196 5607250 -66546632 + MIR SINE MIR 85 147 -61 195 42 0 0 chr20 5608576 5608600 -66545282 + (TCTCCC)n Simple_repeat Simple_repeat 5 28 0 234 245 115 108 chr20 5609442 5609481 -66544401 - L1MC4 LINE L1 -139 7903 7866 1896 133 3 3 chr20 5609481 5609775 -66544107 + AluJo SINE Alu 1 294 -18 234 245 115 108 chr20 5609775 5610021 -66543861 - L1MC4 LINE L1 -176 7866 7616 1715 89 4 4 chr20 5610359 5610595 -66543287 + AluSq SINE Alu 1 236 -77 234 286 155 43 chr20 5610666 5610792 -66543090 + MIR SINE MIR 24 173 -89 1803 143 0 14 chr20 5610792 5611086 -66542796 + AluJo SINE Alu 1 290 -22 234 286 155 43 chr20 5611086 5611120 -66542762 + MIR SINE MIR 173 202 -60 346 291 42 4 chr20 5611938 5612065 -66541817 - L1ME1 LINE L1 -2 6332 6046 207 0 0 0 chr20 5612097 5612120 -66541762 + (TGGA)n Simple_repeat Simple_repeat 3 25 0 2027 115 3 3 chr20 5612179 5612475 -66541407 - AluSx SINE Alu -16 296 1 234 282 76 46 chr20 5613874 5614005 -66539877 + MER5A DNA MER1_type 33 167 -22 258 339 9 9 chr20 5614087 5614196 -66539686 - L2 LINE L2 -214 3058 2950 780 245 65 0 chr20 5614473 5614673 -66539209 - MER58A DNA MER1_type -11 213 1 420 301 133 10 chr20 5620048 5620244 -66533638 - MIR SINE MIR 0 262 43 306 193 18 0 chr20 5620392 5620449 -66533433 - U13 snRNA snRNA -28 76 19 2194 96 7 0 chr20 5620458 5620751 -66533131 - AluSx SINE Alu -17 295 1 419 303 168 32 chr20 5621419 5621974 -66531908 + L2 LINE L2 2087 2716 -598 473 280 122 19 chr20 5621987 5622355 -66531527 - HAL1 LINE L1 -1054 1453 1048 281 252 59 42 chr20 5622355 5622474 -66531408 + L2 LINE L2 3151 3271 -1 839 152 0 33 chr20 5623140 5623291 -66530591 - FRAM SINE Alu -10 166 21 2225 91 3 7 chr20 5623412 5623721 -66530161 - AluSq SINE Alu -5 308 1 328 304 6 88 chr20 5623757 5623928 -66529954 + L1M4 LINE L1 4031 4187 -1959 482 288 183 38 chr20 5623959 5624358 -66529524 + L1M4 LINE L1 4736 5192 -954 1881 145 3 0 chr20 5624367 5624650 -66529232 + AluSx SINE Alu 8 291 -21 248 154 0 39 chr20 5625053 5625105 -66528777 - L1MC5 LINE L1 -48 7913 7864 327 269 103 77 chr20 5625326 5625560 -66528322 - L1MC4a LINE L1 -1879 5929 5690 225 0 0 0 chr20 5625654 5625679 -66528203 + (TTTA)n Simple_repeat Simple_repeat 4 28 0 1290 20 0 0 chr20 5625680 5625826 -66528056 - L1PA5 LINE L1 -9 6145 6000 233 175 48 79 chr20 5626055 5626181 -66527701 + L1ME4a LINE L1 5982 6103 -18 267 301 237 3 chr20 5627327 5627542 -66526340 + MIR SINE MIR 5 262 0 348 318 98 28 chr20 5627583 5627838 -66526044 - L1ME4a LINE L1 -2 6119 5847 2026 93 10 3 chr20 5629791 5630081 -66523801 + AluSx SINE Alu 1 292 -20 299 143 0 0 chr20 5630696 5630738 -66523144 + MER20 DNA MER1_type 178 219 0 2363 85 0 0 chr20 5632242 5632549 -66521333 - AluSg SINE Alu -3 307 1 180 0 0 0 chr20 5633285 5633305 -66520577 + (TG)n Simple_repeat Simple_repeat 2 21 0 183 42 0 0 chr20 5633358 5633382 -66520500 + (GA)n Simple_repeat Simple_repeat 2 25 0 946 207 0 22 chr20 5633514 5633693 -66520189 - FAM SINE Alu 0 175 1 419 244 128 55 chr20 5634420 5634472 -66519410 - MER5A DNA MER1_type -2 187 140 2107 90 30 3 chr20 5634472 5634773 -66519109 + AluSx SINE Alu 1 309 -3 419 244 128 55 chr20 5634773 5634884 -66518998 - MER5A DNA MER1_type -49 140 12 207 0 0 0 chr20 5635197 5635220 -66518662 + (T)n Simple_repeat Simple_repeat 1 23 0 617 264 245 23 chr20 5635292 5635895 -66517987 - L2 LINE L2 0 3313 2596 1261 135 61 156 chr20 5636492 5636713 -66517169 - MER2 DNA MER2_type -1 343 171 2088 122 0 0 chr20 5636713 5637017 -66516865 + AluSx SINE Alu 1 304 -8 1261 135 61 156 chr20 5637017 5637174 -66516708 - MER2 DNA MER2_type -173 171 1 344 182 26 39 chr20 5637369 5637446 -66516436 + L2 LINE L2 3238 3313 0 255 183 56 14 chr20 5637975 5638046 -66515836 + L2 LINE L2 2905 2978 -335 451 260 0 0 chr20 5638538 5638642 -66515240 + MER3 DNA MER1_type 70 126 -83 264 295 150 20 chr20 5639285 5639485 -66514397 - MIR SINE MIR -24 238 13 2353 142 59 29 chr20 5641473 5641794 -66512088 - L1MB5 LINE L1 -13 6161 5822 2139 99 0 14 chr20 5641794 5642087 -66511795 - AluSx SINE Alu -23 289 1 2353 142 59 29 chr20 5642087 5642209 -66511673 - L1MB5 LINE L1 -352 5822 5705 384 233 78 0 chr20 5642217 5642307 -66511575 + MER82 DNA MER2_type 1 97 -556 * 1393 249 119 0 chr20 5642303 5642673 -66511209 + MER82 DNA MER2_type 228 641 -12 1162 174 10 0 chr20 5642685 5642881 -66511001 - L1MB5 LINE L1 -495 5679 5482 21 36 0 0 chr20 5643125 5643153 -66510729 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr20 5643581 5643603 -66510279 + AT_rich Low_complexity Low_complexity 1 22 0 1991 134 0 0 chr20 5644865 5645197 -66508685 - AluSx SINE Alu 0 332 1 510 17 0 0 chr20 5645509 5645568 -66508314 + (TG)n Simple_repeat Simple_repeat 2 60 0 234 0 0 0 chr20 5648429 5648455 -66505427 + (CA)n Simple_repeat Simple_repeat 2 27 0 952 150 105 163 chr20 5650535 5650631 -66503251 + MER2 DNA MER2_type 2 102 -242 1454 172 17 43 chr20 5650631 5650933 -66502949 + AluJo SINE Alu 1 294 -18 952 150 105 163 chr20 5650933 5651197 -66502685 + MER2 DNA MER2_type 102 341 -3 1337 98 112 0 chr20 5651685 5651783 -66502099 - MER30 DNA MER1_type 0 230 144 2101 117 7 3 chr20 5651783 5652090 -66501792 - AluSq SINE Alu -5 308 1 1337 98 112 0 chr20 5652090 5652196 -66501686 - MER30 DNA MER1_type -86 144 3 2303 42 0 3 chr20 5652482 5652786 -66501096 + AluY SINE Alu 1 303 0 308 239 101 55 chr20 5653061 5653170 -66500712 + HAL1 LINE L1 1403 1516 -991 231 231 0 0 chr20 5653170 5653222 -66500660 + L1MDa LINE L1 1846 1897 -4643 461 200 252 26 chr20 5653567 5653713 -66500169 + MER5C DNA MER1_type 11 123 -201 1604 159 9 62 chr20 5653713 5654034 -66499848 - AluJb SINE Alu -4 308 5 461 200 252 26 chr20 5654034 5654117 -66499765 + MER5C DNA MER1_type 123 292 -32 1085 175 0 0 chr20 5654118 5654307 -66499575 + AluJb SINE Alu 113 301 -11 1032 124 164 45 chr20 5654307 5654341 -66499541 + Tigger3(Golem) DNA MER2_type 2814 2843 -195 2138 101 8 62 chr20 5654341 5654697 -66499185 - MER1B DNA MER1_type 0 337 1 1032 124 164 45 chr20 5654697 5654863 -66499019 + Tigger3(Golem) DNA MER2_type 2843 3038 0 1297 120 12 100 chr20 5654875 5655134 -66498748 + MER46A DNA MER2_type 1 236 0 622 274 88 86 chr20 5656031 5656309 -66497573 - L1MC4a LINE L1 -1903 5905 5629 2364 90 0 0 chr20 5656309 5656619 -66497263 - AluSx SINE Alu -2 310 1 622 274 88 86 chr20 5656619 5656930 -66496952 - L1MC4a LINE L1 -2179 5629 5312 806 63 9 18 chr20 5656930 5657041 -66496841 - L1PA11 LINE L1 -1 6173 6064 622 274 88 86 chr20 5657041 5657099 -66496783 - L1MC4a LINE L1 -2496 5312 5256 306 182 121 30 chr20 5657197 5657263 -66496619 + L1M4 LINE L1 5215 5286 -860 1375 147 5 0 chr20 5657501 5657712 -66496170 - AluJb SINE Alu -93 219 8 318 115 0 0 chr20 5657965 5658017 -66495865 + (TCCCC)n Simple_repeat Simple_repeat 3 54 0 486 33 0 0 chr20 5658017 5658077 -66495805 + (TTCC)n Simple_repeat Simple_repeat 3 62 0 1604 168 7 21 chr20 5658077 5658368 -66495514 - AluJb SINE Alu -25 287 1 27 0 0 0 chr20 5658515 5658542 -66495340 + AT_rich Low_complexity Low_complexity 1 27 0 1881 135 44 3 chr20 5658704 5659000 -66494882 + AluSx SINE Alu 1 308 -4 264 333 0 0 chr20 5659063 5659159 -66494723 + L1MC4 LINE L1 7791 7886 -156 * 620 174 0 7 chr20 5659150 5659279 -66494603 + L1M4 LINE L1 4731 4854 -1292 378 200 0 0 chr20 5659280 5659345 -66494537 - AluSc SINE Alu -3 296 232 1606 169 14 7 chr20 5659827 5660111 -66493771 - AluJb SINE Alu -26 286 1 494 328 53 32 chr20 5660162 5660409 -66493473 - L1MC4a LINE L1 -1539 4607 4356 452 202 134 8 chr20 5660429 5660548 -66493334 - MER58C DNA MER1_type -38 177 44 180 321 64 64 chr20 5660877 5661017 -66492865 - L2 LINE L2 0 3272 3133 765 177 39 0 chr20 5661055 5661185 -66492697 - AluJo SINE Alu -176 136 2 2066 69 62 14 chr20 5661521 5661811 -66492071 + AluSp SINE Alu 1 304 -9 1845 134 46 0 chr20 5661831 5662115 -66491767 + AluJb SINE Alu 4 300 -12 378 288 52 57 chr20 5662472 5662684 -66491198 + MIR SINE MIR 52 262 0 817 141 0 16 chr20 5663559 5663687 -66490195 + FLAM_A SINE Alu 1 126 -7 2407 58 0 13 chr20 5664316 5664629 -66489253 - AluY SINE Alu -2 309 1 345 316 53 8 chr20 5664789 5664922 -66488960 - HAL1 LINE L1 -909 1598 1460 2450 72 0 0 chr20 5664934 5665240 -66488642 - AluY SINE Alu -5 306 1 2119 101 3 7 chr20 5665270 5665567 -66488315 - AluSq SINE Alu -17 296 1 967 200 118 0 chr20 5665750 5665945 -66487937 - MER20 DNA MER1_type -1 218 1 1873 114 0 86 chr20 5666499 5666823 -66487059 - AluSx SINE Alu -15 297 2 778 206 106 0 chr20 5666934 5667123 -66486759 - MER3 DNA MER1_type 0 209 1 1677 175 0 38 chr20 5668350 5668670 -66485212 - AluJb SINE Alu -2 310 3 1145 180 8 40 chr20 5668796 5669046 -66484836 - AluJo SINE Alu -24 288 47 46 83 0 0 chr20 5669053 5669162 -66484720 + AT_rich Low_complexity Low_complexity 1 109 0 468 262 87 0 chr20 5669162 5669288 -66484594 - FRAM SINE Alu -31 145 9 2074 94 14 0 chr20 5669310 5669598 -66484284 - AluSx SINE Alu -20 292 1 548 152 0 48 chr20 5669599 5669704 -66484178 + MER58C DNA MER1_type 108 207 -8 2290 57 7 0 chr20 5670234 5670590 -66483292 - AluSp SINE Alu 0 358 1 736 168 23 15 chr20 5670613 5670744 -66483138 - FLAM_C SINE Alu -1 132 1 2381 21 0 3 chr20 5671884 5672206 -66481676 - AluY SINE Alu 0 321 1 560 119 0 24 chr20 5672318 5672402 -66481480 - MER4A LTR ERV1 0 664 583 855 208 23 12 chr20 5672413 5672586 -66481296 + AluJb SINE Alu 134 308 -4 892 147 12 18 chr20 5672933 5672949 -66480933 + MER5A DNA MER1_type 1 15 -174 390 259 41 41 chr20 5672949 5673119 -66480763 - MER5A DNA MER1_type -2 187 18 335 211 0 0 chr20 5673170 5673238 -66480644 + MER5A DNA MER1_type 32 97 -81 569 204 309 0 chr20 5675471 5675633 -66478249 + MIR SINE MIR 13 224 -38 2079 67 57 3 chr20 5675639 5675921 -66477961 + AluY SINE Alu 1 297 -14 2076 77 0 0 chr20 5676710 5676994 -66476888 + AluSg SINE Alu 21 304 0 1355 139 132 26 chr20 5677321 5677587 -66476295 + AluJb SINE Alu 1 294 -18 1904 137 3 3 chr20 5680306 5680606 -66473276 - AluSx SINE Alu -12 300 1 246 221 177 44 chr20 5680859 5680972 -66472910 + MIR SINE MIR 81 208 -54 336 209 136 27 chr20 5681143 5681253 -66472629 + MARNA DNA Mariner 296 417 -169 3262 94 24 2 chr20 5681501 5681957 -66471925 - MER41A LTR ERV1 -88 466 1 3720 91 55 2 chr20 5681957 5682497 -66471385 - MER41A-int LTR ERV1 -2 6093 5394 669 81 23 0 chr20 5682479 5682565 -66471317 - MER41B-int LTR ERV1 -5858 88 1 * 952 150 0 0 chr20 5682565 5682718 -66471164 - MER41B LTR ERV1 0 635 483 1013 161 16 27 chr20 5682719 5682792 -66471090 - MER58A DNA MER1_type -2203 217 145 1621 152 35 90 chr20 5682792 5683160 -66470722 - MER7A DNA MER2_type 0 346 1 1013 161 16 27 chr20 5683160 5683272 -66470610 - MER58A DNA MER1_type -2275 145 34 827 217 33 5 chr20 5684400 5684584 -66469298 - MER5A DNA MER1_type 0 189 1 326 265 74 48 chr20 5684590 5685017 -66468865 + L1M4 LINE L1 3313 3846 -2300 1823 107 26 23 chr20 5685061 5685369 -66468513 + AluSg SINE Alu 1 309 -1 250 297 0 31 chr20 5685596 5685724 -66468158 + HAL1 LINE L1 2301 2424 -83 196 313 78 16 chr20 5685818 5685882 -66468000 - L2 LINE L2 -1 3271 3204 1517 195 0 13 chr20 5686323 5686626 -66467256 + AluJo SINE Alu 1 299 -13 5044 170 81 53 chr20 5688220 5688783 -66465099 + Charlie1a DNA MER1_type 1 547 -2214 1912 107 36 32 chr20 5688783 5689092 -66464790 + AluSx SINE Alu 1 310 -2 5044 170 81 53 chr20 5689092 5689240 -66464642 + Charlie1a DNA MER1_type 547 689 -2072 234 0 0 0 chr20 5689240 5689266 -66464616 + (TG)n Simple_repeat Simple_repeat 2 27 0 5044 170 81 53 chr20 5689266 5689738 -66464144 + Charlie1a DNA MER1_type 689 1218 -237 2087 144 101 36 chr20 5689786 5690202 -66463680 - MSTB2 LTR MaLR 0 457 15 716 162 17 8 chr20 5690603 5690720 -66463162 + FLAM_C SINE Alu 1 118 -15 509 183 50 0 chr20 5696054 5696174 -66457708 - MIR SINE MIR -21 241 116 575 190 8 0 chr20 5696279 5696400 -66457482 + MIR SINE MIR 141 262 0 22 0 0 0 chr20 5698316 5698338 -66455544 + AT_rich Low_complexity Low_complexity 1 22 0 204 67 0 0 chr20 5698418 5698448 -66455434 + (T)n Simple_repeat Simple_repeat 1 30 0 204 348 140 6 chr20 5699568 5699746 -66454136 + L2 LINE L2 2493 2694 -620 7688 19 0 0 chr20 5700597 5701695 -66452187 - L1PA4 LINE L1 0 6155 5047 11876 27 4 0 chr20 5701695 5703076 -66450806 + L1PA4 LINE L1 3675 5060 -1086 2272 95 0 7 chr20 5703078 5703372 -66450510 - AluSx SINE Alu -12 300 9 1106 252 151 44 chr20 5703382 5703946 -66449936 - L2 LINE L2 -9 3304 2802 477 47 0 0 chr20 5703946 5704010 -66449872 + (CA)n Simple_repeat Simple_repeat 2 65 0 1106 252 151 44 chr20 5704010 5704397 -66449485 - L2 LINE L2 -511 2802 2174 758 209 22 44 chr20 5705144 5705326 -66448556 + MER5B DNA MER1_type 1 178 0 2341 94 0 3 chr20 5705552 5705851 -66448031 - AluSx SINE Alu -14 298 1 192 309 43 52 chr20 5705854 5706064 -66447818 - L3 LINE CR1 -257 1320 1113 907 162 81 0 chr20 5706347 5706587 -66447295 - L1MC4 LINE L1 0 8042 7683 236 302 105 0 chr20 5706823 5706909 -66446973 + MIR SINE MIR 56 150 -112 816 203 4 84 chr20 5707331 5707568 -66446314 + MIR SINE MIR 45 262 0 1906 160 24 0 chr20 5707628 5707921 -66445961 - AluSx SINE Alu -12 300 1 809 192 28 84 chr20 5708120 5708406 -66445476 + L1MC5 LINE L1 6810 7079 -882 747 181 0 0 chr20 5708449 5708565 -66445317 - FLAM_C SINE Alu -23 120 5 826 165 86 58 chr20 5708569 5708812 -66445070 + L1M4 LINE L1 4897 5146 -1000 282 363 25 0 chr20 5709531 5709688 -66444194 - MIR SINE MIR -11 251 91 3195 224 16 0 chr20 5710142 5710853 -66443029 + L1 LINE L1 3899 4620 -1526 1032 160 0 17 chr20 5710866 5711041 -66442841 - FRAM SINE Alu -7 169 1 2457 185 25 53 chr20 5711043 5711410 -66442472 + L1 LINE L1 4607 4983 -1163 2048 145 0 3 chr20 5711410 5711707 -66442175 - AluSx SINE Alu -16 296 1 2457 185 25 53 chr20 5711707 5711881 -66442001 + L1 LINE L1 4983 5134 -1012 2346 110 0 0 chr20 5711881 5712189 -66441693 + AluSx SINE Alu 1 308 -4 2457 185 25 53 chr20 5712189 5712214 -66441668 + L1 LINE L1 5134 5158 -988 418 282 18 0 chr20 5712244 5712354 -66441528 - LTR16C LTR ERVL -235 256 145 942 151 33 160 chr20 5712443 5712719 -66441163 + MER33 DNA MER1_type 1 215 -2370 1572 171 13 49 chr20 5712719 5713023 -66440859 - AluJb SINE Alu -19 293 1 942 151 33 160 chr20 5713023 5713113 -66440769 + MER33 DNA MER1_type 215 315 -9 1162 271 73 40 chr20 5713837 5714261 -66439621 - MLT1J LTR MaLR -73 438 1 1800 92 24 4 chr20 5714452 5714703 -66439179 + L1PA10 LINE L1 5908 6163 -5 402 21 0 0 chr20 5714722 5714769 -66439113 + (TG)n Simple_repeat Simple_repeat 1 47 0 419 265 84 63 chr20 5716427 5716629 -66437253 - L2 LINE L2 -648 2666 2457 2124 131 0 16 chr20 5716629 5716934 -66436948 + AluSx SINE Alu 1 300 -12 419 265 84 63 chr20 5716934 5716969 -66436913 - L2 LINE L2 -857 2457 2424 474 276 70 37 chr20 5717444 5717557 -66436325 - LTR16C LTR ERVL -26 465 357 1753 146 41 0 chr20 5717557 5717825 -66436057 + AluJo SINE Alu 1 279 -33 474 276 70 37 chr20 5717825 5718107 -66435775 - LTR16C LTR ERVL -134 357 1 2044 128 0 50 chr20 5718228 5718547 -66435335 - AluSx SINE Alu -9 303 1 456 62 0 0 chr20 5718563 5718627 -66435255 + (TA)n Simple_repeat Simple_repeat 2 65 0 2541 128 32 5 chr20 5719416 5719816 -66434066 - MSTB LTR MaLR -15 411 1 785 299 126 24 chr20 5720077 5720763 -66433119 + L2 LINE L2 2555 3308 -5 210 280 84 56 chr20 5720861 5721004 -66432878 + MIR3 SINE MIR 48 194 -14 1106 249 127 28 chr20 5721142 5721575 -66432307 + LTR16C LTR ERVL 1 476 -15 2997 107 9 12 chr20 5722754 5723183 -66430699 + MSTC LTR MaLR 1 428 0 2624 65 0 0 chr20 5723538 5723848 -66430034 - AluY SINE Alu -1 310 1 1386 229 91 21 chr20 5724945 5725365 -66428517 + LTR16A1 LTR ERVL 8 456 -1 2222 125 0 10 chr20 5725519 5725823 -66428059 - AluSx SINE Alu -10 302 2 2276 170 62 5 chr20 5726142 5726577 -66427305 + MLT1C LTR MaLR 6 465 -2 320 64 21 0 chr20 5726829 5726876 -66427006 + (TTTC)n Simple_repeat Simple_repeat 3 50 0 4073 42 16 8 chr20 5726902 5727403 -66426479 - L1PA6 LINE L1 -11 6143 5639 400 278 26 0 chr20 5727911 5728026 -66425856 - Charlie7 DNA MER1_type -1922 690 573 2437 78 0 0 chr20 5728255 5728551 -66425331 + AluY SINE Alu 1 296 -15 2112 128 0 0 chr20 5729139 5729436 -66424446 - AluJb SINE Alu -15 297 1 1935 243 96 98 chr20 5729522 5730153 -66423729 + Charlie7 DNA MER1_type 125 753 -1859 2216 140 0 0 chr20 5730153 5730461 -66423421 + AluSx SINE Alu 1 308 -4 1935 243 96 98 chr20 5730461 5730968 -66422914 + Charlie7 DNA MER1_type 753 1260 -1352 226 222 0 0 chr20 5731189 5731234 -66422648 + Charlie7 DNA MER1_type 1377 1421 -1191 587 106 24 0 chr20 5731235 5731320 -66422562 + MER21B LTR ERV1 329 415 -448 210 71 0 0 chr20 5731360 5731388 -66422494 + (TAAAA)n Simple_repeat Simple_repeat 3 30 0 569 212 152 24 chr20 5731426 5731591 -66422291 + Charlie7 DNA MER1_type 1503 1688 -924 321 238 42 49 chr20 5732048 5732191 -66421691 + L1MC5 LINE L1 7540 7681 -280 1189 182 153 10 chr20 5732197 5732482 -66421400 + MLT1A1 LTR MaLR 1 333 -32 791 195 7 7 chr20 5732482 5732636 -66421246 - FRAM SINE Alu -22 154 1 247 294 28 51 chr20 5732676 5732931 -66420951 + L1MC4 LINE L1 7794 8042 0 379 250 153 20 chr20 5732952 5733148 -66420734 + Charlie7 DNA MER1_type 1713 1934 -678 3537 197 43 7 chr20 5733149 5733966 -66419916 + L1MB2 LINE L1 4342 5187 -959 1210 196 141 4 chr20 5733969 5734224 -66419658 + AluJo SINE Alu 2 291 -11 369 185 80 8 chr20 5734227 5734338 -66419544 + Alu SINE Alu 234 297 -5 5030 145 32 23 chr20 5734348 5734956 -66418926 + L1MB2 LINE L1 5166 5791 -380 184 57 29 29 chr20 5734956 5734991 -66418891 + (TA)n Simple_repeat Simple_repeat 1 35 0 5030 145 32 23 chr20 5734991 5735375 -66418507 + L1MB2 LINE L1 5791 6170 -1 884 224 114 59 chr20 5735389 5735897 -66417985 + Charlie7 DNA MER1_type 1927 2462 -150 207 0 0 0 chr20 5736066 5736089 -66417793 + (GGGA)n Simple_repeat Simple_repeat 4 26 0 1120 176 35 0 chr20 5736163 5736362 -66417520 + MER3 DNA MER1_type 2 207 -2 588 40 0 0 chr20 5736883 5736958 -66416924 + (TTTC)n Simple_repeat Simple_repeat 2 76 0 32612 110 12 52 chr20 5736958 5743355 -66410527 - L1PA7 LINE L1 -12 6142 12 1701 95 32 4 chr20 5743597 5743849 -66410033 + L1MA2 LINE L1 6006 6264 -40 3784 66 10 0 chr20 5743849 5744330 -66409552 + L1PA6 LINE L1 5663 6153 -1 331 167 0 0 chr20 5744963 5745023 -66408859 + L1MA3 LINE L1 6246 6305 0 618 269 8 61 chr20 5745773 5746037 -66407845 + L1M4 LINE L1 4442 4691 -1455 259 276 0 0 chr20 5746097 5746155 -66407727 - L2 LINE L2 0 3313 3256 1160 155 5 15 chr20 5746200 5746400 -66407482 - L1PB2 LINE L1 -3 6148 5951 182 279 162 0 chr20 5746452 5746520 -66407362 + MIR SINE MIR 66 144 -118 15161 171 24 10 chr20 5746660 5752278 -66401604 - L1PB2 LINE L1 -175 6692 998 360 111 0 0 chr20 5752278 5752332 -66401550 + (T)n Simple_repeat Simple_repeat 1 54 0 3530 222 21 12 chr20 5752361 5753225 -66400657 - L1M4c LINE L1 -3263 4302 3328 1931 149 3 34 chr20 5753225 5753547 -66400335 - AluSx SINE Alu 0 312 1 3530 222 21 12 chr20 5753547 5753974 -66399908 - L1M4c LINE L1 -4237 3328 2906 1509 195 22 11 chr20 5753974 5754251 -66399631 - AluJo SINE Alu -2 310 31 605 350 5 9 chr20 5754251 5754465 -66399417 - L1M4c LINE L1 -5742 1744 1532 * 963 186 9 27 chr20 5754453 5754673 -66399209 - L1 LINE L1 -2567 3579 3364 * 2545 160 44 48 chr20 5754671 5755196 -66398686 + L1MA9 LINE L1 5768 6290 -22 180 0 0 0 chr20 5755204 5755224 -66398658 + (GAAAA)n Simple_repeat Simple_repeat 2 21 0 6691 185 58 51 chr20 5755226 5755977 -66397905 + L1MD1 LINE L1 14 758 -5782 2017 123 0 27 chr20 5755977 5756277 -66397605 + AluSx SINE Alu 1 292 -20 6691 185 58 51 chr20 5756277 5757609 -66396273 + L1MD1 LINE L1 758 2453 -4087 3372 241 43 18 chr20 5757604 5757696 -66396186 + L1MD1 LINE L1 4158 4246 -2294 * 737 238 0 0 chr20 5757696 5757822 -66396060 + FLAM_A SINE Alu 1 126 -7 3372 241 43 18 chr20 5757822 5758678 -66395204 + L1MD1 LINE L1 4246 5130 -1410 1798 166 31 17 chr20 5758680 5759029 -66394853 - MLT1A1 LTR MaLR 0 365 12 2262 197 44 49 chr20 5759041 5760125 -66393757 + L1MD1 LINE L1 5129 6214 -422 5405 66 19 9 chr20 5760131 5760814 -66393068 + L1PA10 LINE L1 5479 6168 0 2491 151 44 2 chr20 5760814 5761223 -66392659 + L1MD1 LINE L1 6208 6636 0 2061 109 3 3 chr20 5761231 5761545 -66392337 + AluSx SINE Alu 1 314 0 2123 102 0 23 chr20 5761638 5761941 -66391941 - AluSc SINE Alu -12 297 2 451 270 65 99 chr20 5762103 5762820 -66391062 + L1MC4a LINE L1 5255 5931 -231 3144 133 44 11 chr20 5763637 5764179 -66389703 + L1MC1 LINE L1 5383 5942 -391 1073 210 58 0 chr20 5764177 5764401 -66389481 - L1ME LINE L1 -540 5624 5388 * 565 189 217 0 chr20 5764928 5765071 -66388811 - MER5A DNA MER1_type -7 182 9 2486 129 65 8 chr20 5765252 5765654 -66388228 - MSTB1 LTR MaLR 0 432 8 318 231 17 0 chr20 5765780 5765871 -66388011 + L1ME LINE L1 5750 5817 -304 1227 259 171 23 chr20 5766452 5766880 -66387002 + LTR16C LTR ERVL 1 491 0 917 240 132 12 chr20 5767179 5767467 -66386415 - HAL1 LINE L1 -2114 393 58 2080 144 0 3 chr20 5767467 5767766 -66386116 + AluSx SINE Alu 1 298 -14 917 240 132 12 chr20 5767766 5767810 -66386072 - HAL1 LINE L1 -2449 58 21 502 265 27 27 chr20 5767913 5768060 -66385822 - MER5A DNA MER1_type -3 186 40 464 354 91 30 chr20 5768175 5768537 -66385345 - L3 LINE CR1 -174 1403 1020 1837 163 35 0 chr20 5769925 5770214 -66383668 - AluJo SINE Alu -13 299 1 231 36 0 0 chr20 5770735 5770763 -66383119 + (TTCA)n Simple_repeat Simple_repeat 4 31 0 1490 111 0 5 chr20 5771024 5771231 -66382651 - AluY SINE Alu -105 206 1 188 283 120 22 chr20 5771438 5771530 -66382352 + MIR SINE MIR 30 130 -78 342 0 0 0 chr20 5771648 5771686 -66382196 + (TC)n Simple_repeat Simple_repeat 2 39 0 2059 83 4 0 chr20 5772355 5772634 -66381248 + AluSp SINE Alu 32 311 0 1477 212 33 44 chr20 5772723 5773086 -66380796 - MLT1A1 LTR MaLR -6 359 1 614 211 68 84 chr20 5773315 5773552 -66380330 + LTR16A1 LTR ERVL 205 437 -20 1486 225 15 0 chr20 5773863 5774187 -66379695 - L1MA9 LINE L1 -34 6278 5950 693 204 0 0 chr20 5774197 5774329 -66379553 + MIR SINE MIR 59 190 -72 506 261 86 39 chr20 5775260 5775701 -66378181 + LTR33 LTR ERVL 14 521 0 207 0 0 0 chr20 5776767 5776790 -66377092 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 419 288 0 14 chr20 5776895 5777034 -66376848 - L1M4 LINE L1 -1300 4846 4710 343 333 63 8 chr20 5777079 5777331 -66376551 - L1M4 LINE L1 -1819 4327 4062 8493 31 0 1 chr20 5777375 5779100 -66374782 - L1PA3 LINE L1 0 6155 4431 10768 26 0 0 chr20 5779100 5780370 -66373512 + L1P LINE L1 2693 3962 -2184 274 155 0 28 chr20 5780655 5780726 -66373156 + CT-rich Low_complexity Low_complexity 1 69 0 3524 195 19 2 chr20 5781440 5782075 -66371807 + MER82 DNA MER2_type 1 646 -7 948 106 8 0 chr20 5783168 5783300 -66370582 - MLT1D LTR MaLR 0 505 373 15922 195 30 14 chr20 5783307 5787114 -66366768 + L1PB1 LINE L1 6 4134 -2733 2071 95 0 0 chr20 5787114 5787387 -66366495 + AluY SINE Alu 39 311 0 15922 195 30 14 chr20 5787387 5790162 -66363720 + L1PB1 LINE L1 4134 6863 -4 530 211 261 0 chr20 5790224 5790366 -66363516 - MLT1D LTR MaLR -118 387 209 189 0 0 0 chr20 5790392 5790413 -66363469 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 733 214 0 0 chr20 5790419 5790536 -66363346 - FLAM_C SINE Alu -25 118 2 1133 174 18 28 chr20 5790555 5790773 -66363109 - MLT1D LTR MaLR -289 216 1 1894 141 28 0 chr20 5791064 5791347 -66362535 + AluJb SINE Alu 14 304 -8 1978 141 8 57 chr20 5791348 5791716 -66362166 + L1MA8 LINE L1 5942 6291 0 198 289 14 41 chr20 5792120 5792269 -66361613 - L3 LINE CR1 -885 692 473 23 0 0 0 chr20 5793444 5793467 -66360415 + AT_rich Low_complexity Low_complexity 1 23 0 32 57 0 0 chr20 5794337 5794390 -66359492 + AT_rich Low_complexity Low_complexity 1 53 0 481 255 145 30 chr20 5796211 5796411 -66357471 - MIR SINE MIR -3 259 37 1416 196 45 17 chr20 5797315 5797606 -66356276 - AluJo SINE Alu -9 303 5 2094 123 0 0 chr20 5798090 5798383 -66355499 + AluSx SINE Alu 1 293 -19 1059 144 57 6 chr20 5798511 5798900 -66354982 + LTR64 LTR ERVK 1 552 -6 189 398 48 0 chr20 5799429 5799512 -66354370 + MIR SINE MIR 58 144 -118 426 85 0 0 chr20 5799562 5799621 -66354261 + (TG)n Simple_repeat Simple_repeat 1 59 0 27 29 0 0 chr20 5800632 5800666 -66353216 + AT_rich Low_complexity Low_complexity 1 34 0 1881 139 10 7 chr20 5800807 5801108 -66352774 - AluSx SINE Alu -10 302 1 228 167 0 21 chr20 5801191 5801239 -66352643 + (CAAA)n Simple_repeat Simple_repeat 1 47 0 243 293 116 102 chr20 5801761 5801908 -66351974 - MIR SINE MIR -81 181 33 194 0 39 0 chr20 5802389 5802415 -66351467 + (TTG)n Simple_repeat Simple_repeat 2 28 0 1969 128 7 0 chr20 5802417 5802715 -66351167 - AluSx SINE Alu -12 300 1 536 314 80 29 chr20 5804095 5804334 -66349548 + MIR SINE MIR 12 262 0 205 250 167 42 chr20 5804568 5804664 -66349218 - MIR SINE MIR -79 129 22 254 98 0 24 chr20 5805027 5805068 -66348814 + MER9 LTR ERVK 1 40 -471 20223 64 21 18 chr20 5805068 5805702 -66348180 + HERVK9 LTR ERVK 138 769 -5147 184 228 0 88 chr20 5805702 5805759 -66348123 + MER5B DNA MER1_type 58 109 -69 20223 64 21 18 chr20 5805759 5807710 -66346172 + HERVK9 LTR ERVK 769 2786 -3130 1921 48 0 0 chr20 5807710 5807941 -66345941 + HERVK9 LTR ERVK 3711 3941 -1975 * 7982 94 2 3 chr20 5807940 5808994 -66344888 + HERVK9 LTR ERVK 4582 5634 -282 2261 90 35 4 chr20 5809035 5809364 -66344518 + HERVK9 LTR ERVK 4922 5916 0 3731 77 8 49 chr20 5809364 5809897 -66343985 + MER9 LTR ERVK 1 511 0 1939 187 49 55 chr20 5810392 5810900 -66342982 - MLT1D LTR MaLR 0 505 1 388 242 50 115 chr20 5811121 5811303 -66342579 + MIR3 SINE MIR 18 187 -21 323 242 24 23 chr20 5811844 5812020 -66341862 + LTR16C LTR ERVL 240 490 -1 3650 65 0 0 chr20 5812736 5813180 -66340702 + MLT2A1 LTR ERVL 1 444 0 408 256 33 16 chr20 5813181 5813302 -66340580 - MER5A DNA MER1_type -7 182 60 2267 81 0 0 chr20 5813304 5813589 -66340293 - AluSq SINE Alu -26 287 3 1501 97 8 24 chr20 5814101 5814349 -66339533 + L1MA5 LINE L1 6055 6298 -2 595 217 67 27 chr20 5814544 5814731 -66339151 + L1ME3 LINE L1 5883 6074 -88 185 273 73 0 chr20 5816207 5816262 -66337620 + MIR SINE MIR 81 139 -123 268 299 0 0 chr20 5816266 5816333 -66337549 + L2 LINE L2 3245 3311 -2 567 70 40 60 chr20 5817607 5817707 -66336175 - L1M3 LINE L1 -509 5674 5577 314 130 234 13 chr20 5817719 5817796 -66336086 + Charlie1 DNA MER1_type 2620 2713 -48 270 189 38 0 chr20 5817895 5817948 -66335934 - MER94 DNA DNA -79 55 1 1771 181 3 0 chr20 5819366 5819670 -66334212 - AluJb SINE Alu -3 309 5 1784 244 98 7 chr20 5820296 5820743 -66333139 - MLT1J LTR MaLR -18 493 6 692 177 46 0 chr20 5821124 5821254 -66332628 - FLAM_C SINE Alu -6 137 2 556 191 157 0 chr20 5821279 5821394 -66332488 - FLAM_A SINE Alu 0 133 1 588 119 0 40 chr20 5821494 5821595 -66332287 - AluSg/x SINE Alu 0 312 216 205 219 109 47 chr20 5821770 5821834 -66332048 - MIR SINE MIR -99 109 42 782 112 0 40 chr20 5822546 5822671 -66331211 - AluJb SINE Alu -1 311 192 236 299 89 0 chr20 5822760 5822917 -66330965 - L1ME LINE L1 -671 5450 5280 887 143 0 0 chr20 5823127 5823253 -66330629 - FLAM_C SINE Alu -7 126 1 2078 113 7 0 chr20 5823264 5823566 -66330316 - AluSq SINE Alu -9 304 1 266 204 57 23 chr20 5823566 5823654 -66330228 - L1 LINE L1 -1102 5044 4954 204 286 32 16 chr20 5823902 5823965 -66329917 - MIR3 SINE MIR -142 66 3 751 189 8 0 chr20 5825034 5825161 -66328721 + FLAM_A SINE Alu 4 131 -2 734 172 8 0 chr20 5825166 5825288 -66328594 - FLAM_C SINE Alu -19 124 2 2334 96 3 0 chr20 5825303 5825615 -66328267 - AluSp SINE Alu 0 313 1 186 71 0 0 chr20 5825632 5825660 -66328222 + (A)n Simple_repeat Simple_repeat 1 28 0 2123 99 0 3 chr20 5826011 5826294 -66327588 + AluSx SINE Alu 1 282 -30 412 261 43 43 chr20 5826645 5826806 -66327076 + MER112 DNA MER1_type 17 177 -83 583 245 109 11 chr20 5826813 5826997 -66326885 - L1ME3A LINE L1 -6 6164 5963 392 191 95 0 chr20 5827004 5827088 -66326794 + MER112 DNA MER1_type 161 252 -8 207 295 66 0 chr20 5827127 5827188 -66326694 - MIR SINE MIR -67 141 77 371 229 194 14 chr20 5827956 5828100 -66325782 - L2 LINE L2 -36 3277 3108 207 0 0 0 chr20 5828191 5828214 -66325668 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1787 159 0 0 chr20 5828216 5828499 -66325383 - AluJb SINE Alu -29 283 1 756 178 59 87 chr20 5829103 5829356 -66324526 - MLT1D LTR MaLR -256 249 4 190 341 71 29 chr20 5829579 5829749 -66324133 - L2 LINE L2 -578 2736 2560 845 289 135 27 chr20 5830157 5830558 -66323324 - MLT1K LTR MaLR -19 569 126 1979 193 23 3 chr20 5831063 5831416 -66322466 - MLT1A1 LTR MaLR 0 365 6 1131 70 41 35 chr20 5831535 5831707 -66322175 - MER30 DNA MER1_type -57 173 1 2010 122 0 22 chr20 5831716 5832027 -66321855 - AluSq SINE Alu -9 304 1 1259 63 11 37 chr20 5832721 5832910 -66320972 - L1PA3 LINE L1 0 6155 5972 953 143 35 64 chr20 5834034 5834083 -66319799 - MER3 DNA MER1_type 0 209 160 4349 126 22 27 chr20 5834083 5834824 -66319058 - L1MB3 LINE L1 -1 6182 5446 953 143 35 64 chr20 5834824 5834977 -66318905 - MER3 DNA MER1_type -49 160 13 209 217 0 22 chr20 5835448 5835494 -66318388 - L3 LINE CR1 -568 1009 965 233 286 16 0 chr20 5835554 5835617 -66318265 - MLT1K LTR MaLR -345 243 180 1504 281 59 23 chr20 5835704 5835733 -66318149 - L2 LINE L2 -823 2491 2465 1370 146 35 9 chr20 5835733 5835959 -66317923 + MER46A DNA MER2_type 3 234 -2 1504 281 59 23 chr20 5835959 5836501 -66317381 - L2 LINE L2 -849 2465 1899 661 184 0 0 chr20 5836614 5836723 -66317159 + FLAM_C SINE Alu 2 110 -33 400 166 23 168 chr20 5836723 5836807 -66317075 - L1MC5 LINE L1 -825 6983 7010 2162 102 3 0 chr20 5836807 5837112 -66316770 - AluSp SINE Alu -7 306 1 400 166 23 168 chr20 5837112 5837237 -66316645 - L1MC5 LINE L1 -797 7011 6870 2099 124 3 0 chr20 5837331 5837637 -66316245 - AluSx SINE Alu -1 311 5 236 233 139 0 chr20 5838988 5839074 -66314808 - L2 LINE L2 -35 3237 3140 841 208 0 0 chr20 5839095 5839254 -66314628 - AluJb SINE Alu -7 305 147 1157 329 172 18 chr20 5839404 5840612 -66313270 - L2 LINE L2 -357 2957 1564 207 100 0 0 chr20 5841085 5841115 -66312767 + (TA)n Simple_repeat Simple_repeat 2 31 0 2239 108 0 9 chr20 5841684 5841999 -66311883 + AluSx SINE Alu 1 312 0 277 176 206 0 chr20 5843037 5843105 -66310777 - L2 LINE L2 -2 3270 3189 1734 37 0 0 chr20 5844326 5844542 -66309340 + L1P LINE L1 3202 3417 -2729 224 311 90 57 chr20 5845303 5845425 -66308457 - MIR SINE MIR -116 146 21 241 262 55 67 chr20 5845928 5846092 -66307790 + L1ME LINE L1 5259 5420 -744 519 219 296 0 chr20 5847831 5848000 -66305882 + MIR SINE MIR 6 224 -38 2227 67 57 3 chr20 5848006 5848288 -66305594 + AluY SINE Alu 1 297 -14 2216 77 0 0 chr20 5849077 5849361 -66304521 + AluSg SINE Alu 21 304 0 308 221 130 102 chr20 5899803 5900088 -66253794 + L1M2 LINE L1 445 737 -6112 299 281 0 22 chr20 5900567 5900656 -66253226 - Charlie8 DNA MER1_type -2205 212 126 198 220 40 0 chr20 5900755 5900805 -66253077 + MIR3 SINE MIR 150 201 -7 736 268 119 40 chr20 5901341 5901796 -66252086 - LTR16C LTR ERVL 0 491 1 204 40 0 0 chr20 5902657 5902682 -66251200 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 970 193 0 0 chr20 5902682 5902832 -66251050 - FRAM SINE Alu -16 150 1 1466 190 6 100 chr20 5902849 5903180 -66250702 - AluJb SINE Alu -2 300 1 496 289 0 72 chr20 5903298 5903354 -66250528 + L1ME LINE L1 5548 5606 -515 1752 175 10 7 chr20 5903354 5903646 -66250236 + AluJo SINE Alu 1 293 -19 496 289 0 72 chr20 5903646 5903797 -66250085 + L1ME LINE L1 5606 5740 -381 2467 70 3 6 chr20 5904553 5904865 -66249017 - AluY SINE Alu 0 311 1 322 203 16 0 chr20 5905329 5905393 -66248489 - LTR16C LTR ERVL 0 491 427 347 222 20 10 chr20 5905431 5905530 -66248352 - MLT1H LTR MaLR -419 130 31 303 265 10 20 chr20 5905613 5905715 -66248167 + LTR67 LTR ERVL 457 557 0 304 206 165 52 chr20 5905719 5905816 -66248066 - MIR SINE MIR -147 115 8 2829 120 34 5 chr20 5907157 5907573 -66246309 - L1PA15 LINE L1 -7 6158 5731 198 0 0 0 chr20 5907823 5907845 -66246037 + (TTTG)n Simple_repeat Simple_repeat 1 22 0 2460 36 0 0 chr20 5907845 5908124 -66245758 - AluY SINE Alu -32 279 1 403 0 0 0 chr20 5908505 5908552 -66245330 + L1PA3 LINE L1 6106 6152 -3 374 285 176 6 chr20 5909686 5909851 -66244031 - MER91A DNA MER1_type -2 194 2 858 212 0 18 chr20 5911970 5912140 -66241742 - MER5B DNA MER1_type -3 175 9 2134 118 20 3 chr20 5912224 5912529 -66241353 - AluSx SINE Alu -2 310 1 5766 150 10 18 chr20 5912682 5913610 -66240272 - MER49 LTR ERV1 0 923 4 2762 203 59 89 chr20 5913614 5914458 -66239424 - MER49-int LTR ERV1 -1 6757 5939 483 98 113 217 chr20 5914460 5914533 -66239349 - MER49-int LTR ERV1 -1367 4964 4885 2020 152 49 21 chr20 5914533 5914861 -66239021 - MER1B DNA MER1_type 0 337 1 483 98 113 217 chr20 5914861 5914918 -66238964 - MER49-int LTR ERV1 -1446 4885 4860 862 154 0 0 chr20 5914918 5915041 -66238841 - FLAM_C SINE Alu -9 124 2 483 98 113 217 chr20 5915041 5915112 -66238770 - MER49-int LTR ERV1 -1471 4860 4783 495 161 7 72 chr20 5915260 5915464 -66238418 - MER49-int LTR ERV1 -4167 3953 3786 588 189 56 39 chr20 5915625 5915863 -66238019 - LTR49-int LTR ERV1 -1865 4733 3913 904 174 7 7 chr20 5915868 5916023 -66237859 + FRAM SINE Alu 4 158 -18 3054 144 29 8 chr20 5916060 5916691 -66237191 - Ricksha DNA DNA -1368 1878 1201 1281 135 333 7 chr20 5916689 5916971 -66236911 - Ricksha DNA DNA -2870 376 3 * 339 268 95 60 chr20 5916980 5917148 -66236734 - MLT1H LTR MaLR -252 297 124 365 0 22 0 chr20 5917378 5917423 -66236459 + (TG)n Simple_repeat Simple_repeat 2 47 0 7196 68 13 13 chr20 5917460 5918452 -66235430 - L1PA10 LINE L1 -3 6165 5171 1480 279 109 33 chr20 5918567 5919285 -66234597 + L1MC4 LINE L1 7270 8041 -1 188 33 0 33 chr20 5919380 5919410 -66234472 + (CAA)n Simple_repeat Simple_repeat 2 30 0 12274 181 37 15 chr20 5919935 5921779 -66232103 + L1MB3 LINE L1 25 1825 -4594 2083 153 3 0 chr20 5921779 5922086 -66231796 - AluJb SINE Alu -4 308 1 12274 181 37 15 chr20 5922086 5925333 -66228549 + L1MB3 LINE L1 1825 5188 -1231 1853 157 16 16 chr20 5925333 5925645 -66228237 - AluJb SINE Alu 0 312 1 12274 181 37 15 chr20 5925645 5926905 -66226977 + L1MB3 LINE L1 5188 6418 -1 188 246 74 66 chr20 5928037 5928159 -66225723 - L2 LINE L2 -184 3088 2966 28 0 0 0 chr20 5928460 5928488 -66225394 + AT_rich Low_complexity Low_complexity 1 28 0 276 350 68 0 chr20 5929463 5929580 -66224302 + L2 LINE L2 2928 3052 -220 1857 166 5 93 chr20 5929921 5930318 -66223564 - MLT1A1 LTR MaLR 0 365 4 551 294 77 21 chr20 5930326 5930561 -66223321 - MIR SINE MIR -10 252 5 1950 185 75 23 chr20 5931483 5931921 -66221961 + MLT1C LTR MaLR 6 466 -1 542 270 18 25 chr20 5931933 5932096 -66221786 + MER5B DNA MER1_type 17 178 0 445 250 0 0 chr20 5932559 5932647 -66221235 + MER5A DNA MER1_type 15 102 -87 889 234 27 0 chr20 5933007 5933191 -66220691 + MER5A DNA MER1_type 1 189 0 1116 191 132 0 chr20 5933297 5933532 -66220350 + L1ME3A LINE L1 5707 5972 -198 2015 123 19 32 chr20 5933644 5933953 -66219929 - AluSx SINE Alu -7 305 1 555 261 6 22 chr20 5934006 5934186 -66219696 + L1ME3A LINE L1 5989 6165 -5 315 367 14 14 chr20 5935004 5935151 -66218731 - MIR3 SINE MIR -24 184 38 2637 102 8 8 chr20 5935343 5935697 -66218185 - THE1A LTR MaLR 0 355 2 2372 42 0 17 chr20 5935716 5936036 -66217846 - AluY SINE Alu 0 315 1 26 30 0 0 chr20 5936036 5936069 -66217813 + AT_rich Low_complexity Low_complexity 1 33 0 259 295 77 0 chr20 5936168 5936246 -66217636 - L2 LINE L2 -25 3247 3164 21 57 0 0 chr20 5936728 5936763 -66217119 + AT_rich Low_complexity Low_complexity 1 35 0 204 319 76 17 chr20 5936801 5936920 -66216962 - L3 LINE CR1 -315 1262 1137 28 48 0 0 chr20 5937008 5937050 -66216832 + AT_rich Low_complexity Low_complexity 1 42 0 191 39 39 59 chr20 5937120 5937171 -66216711 + (TTAAA)n Simple_repeat Simple_repeat 1 50 0 22 0 0 0 chr20 5937171 5937193 -66216689 + AT_rich Low_complexity Low_complexity 1 22 0 184 359 39 0 chr20 5937277 5937380 -66216502 + L3 LINE CR1 1137 1243 -334 252 265 31 20 chr20 5937385 5937483 -66216399 - LTR67 LTR ERVL 0 557 459 243 302 147 9 chr20 5937816 5937932 -66215950 + L2 LINE L2 3137 3268 -4 226 339 52 9 chr20 5937950 5938065 -66215817 + L3 LINE CR1 1283 1402 -175 357 305 116 12 chr20 5938139 5938303 -66215579 + MLT1K LTR MaLR 31 211 -377 431 303 49 6 chr20 5938635 5938797 -66215085 + MER117 DNA MER1_type 29 197 0 720 208 13 0 chr20 5938847 5939001 -66214881 - MER3 DNA MER1_type 0 2624 2469 470 177 0 0 chr20 5938999 5939078 -66214804 - MER3 DNA MER1_type -92 117 39 * 331 299 24 24 chr20 5939078 5939205 -66214677 - MIR3 SINE MIR -12 196 70 2535 186 38 30 chr20 5939255 5939756 -66214126 + MLT1D LTR MaLR 1 505 0 21 0 0 0 chr20 5940569 5940590 -66213292 + AT_rich Low_complexity Low_complexity 1 21 0 414 289 44 13 chr20 5940650 5940809 -66213073 - MIR3 SINE MIR -11 197 34 850 294 82 8 chr20 5941411 5941765 -66212117 + L1M4 LINE L1 4970 5349 -797 2343 93 0 3 chr20 5942077 5942378 -66211504 + AluY SINE Alu 1 300 -11 577 166 83 78 chr20 5942382 5942526 -66211356 + Charlie2 DNA MER1_type 2654 2801 -61 2187 165 40 3 chr20 5942526 5942878 -66211004 - MLT1A1 LTR MaLR 0 365 1 577 166 83 78 chr20 5942878 5942938 -66210944 + Charlie2 DNA MER1_type 2801 2859 -3 2445 73 0 0 chr20 5943574 5943877 -66210005 - AluY SINE Alu -8 303 1 200 256 0 0 chr20 5944229 5944272 -66209610 - L3 LINE CR1 -3 1574 1532 540 248 88 44 chr20 5944653 5944792 -66209090 + MIR SINE MIR 24 178 -84 2412 219 56 19 chr20 5944792 5945312 -66208570 + MLT1F LTR MaLR 4 542 0 540 248 88 44 chr20 5945312 5945398 -66208484 + MIR SINE MIR 178 259 -3 27 29 0 0 chr20 5945837 5945871 -66208011 + AT_rich Low_complexity Low_complexity 1 34 0 336 248 103 8 chr20 5946459 5946576 -66207306 - MIR SINE MIR -75 187 60 590 135 198 18 chr20 5946681 5946792 -66207090 + FLAM_C SINE Alu 1 131 -2 278 111 111 0 chr20 5946814 5946868 -66207014 - L1MB1 LINE L1 0 6168 6109 5196 127 10 6 chr20 5946906 5947623 -66206259 - MER72 LTR ERV1 0 722 3 1058 173 0 0 chr20 5947773 5947941 -66205941 + LTR54 LTR ERV1 1 168 -342 2327 184 108 30 chr20 5947978 5948515 -66205367 + LTR8 LTR ERV1 113 691 0 518 202 32 0 chr20 5948520 5948644 -66205238 + LTR54B LTR ERV1 365 492 -6 2574 158 40 40 chr20 5948779 5949285 -66204597 - MER34C LTR ERV1 -79 506 1 2272 105 3 0 chr20 5949729 5950025 -66203857 - AluSg SINE Alu -13 297 1 2625 166 66 130 chr20 5950254 5951031 -66202851 - LTR8A LTR ERV1 0 727 1 1995 151 169 17 chr20 5951065 5951468 -66202414 - MER31B LTR ERV1 0 466 3 257 241 69 23 chr20 5951760 5951847 -66202035 + L1ME3A LINE L1 5970 6060 -110 1896 128 35 25 chr20 5952030 5952312 -66201570 + THE1B LTR MaLR 80 364 0 511 333 56 17 chr20 5952314 5952725 -66201157 + L1M4 LINE L1 4743 5169 -977 652 226 99 32 chr20 5952791 5953012 -66200870 + L2 LINE L2 1342 1577 -1737 4124 139 77 9 chr20 5953022 5953682 -66200200 + MER39 LTR ERV1 3 707 0 1663 275 125 27 chr20 5953711 5953997 -66199885 + L2 LINE L2 2244 2501 -812 1954 146 3 3 chr20 5953997 5954284 -66199598 + AluJo SINE Alu 1 287 -25 279 0 0 0 chr20 5954285 5954316 -66199566 + (CA)n Simple_repeat Simple_repeat 2 32 0 1663 275 125 27 chr20 5954316 5954868 -66199014 + L2 LINE L2 2500 3162 -151 275 253 0 40 chr20 5956020 5956095 -66197787 - L1MD2 LINE L1 -262 6097 6026 1613 179 137 23 chr20 5956096 5956482 -66197400 - MER45B DNA AcHobo 0 1040 611 396 221 176 22 chr20 5956958 5957094 -66196788 + MIR SINE MIR 3 159 -103 351 190 220 0 chr20 5957106 5957206 -66196676 - L1ME3A LINE L1 -1 6169 6048 355 233 14 0 chr20 5957230 5957303 -66196579 + MIR SINE MIR 168 241 -21 23 0 0 0 chr20 5958729 5958752 -66195130 + AT_rich Low_complexity Low_complexity 1 23 0 180 77 0 0 chr20 5958831 5958857 -66195025 + (TG)n Simple_repeat Simple_repeat 2 27 0 1166 274 100 52 chr20 5959592 5960091 -66193791 + MLT1G1 LTR MaLR 73 595 0 801 189 8 0 chr20 5961080 5961207 -66192675 - FLAM_C SINE Alu -14 129 2 198 244 35 58 chr20 5961398 5961484 -66192398 + MIR SINE MIR 173 256 -6 256 271 8 17 chr20 5961519 5961637 -66192245 + (TA)n Simple_repeat Simple_repeat 1 117 0 186 133 0 0 chr20 5962031 5962061 -66191821 + (ATG)n Simple_repeat Simple_repeat 3 32 0 183 288 51 0 chr20 5962065 5962124 -66191758 - MIR SINE MIR -8 254 193 193 318 162 26 chr20 5962160 5962314 -66191568 - MIR3 SINE MIR -17 191 17 235 176 39 20 chr20 5962468 5962519 -66191363 + L1ME2 LINE L1 5998 6049 -115 2198 100 0 61 chr20 5962525 5962855 -66191027 + AluSx SINE Alu 1 310 -2 241 248 15 128 chr20 5962860 5962993 -66190889 + L1ME2 LINE L1 6038 6155 -9 493 108 14 0 chr20 5963058 5963132 -66190750 - MSTB1 LTR MaLR 0 426 352 4902 14 0 0 chr20 5963132 5964037 -66189845 - L1P1 LINE L1 -422 5733 4829 3715 17 0 0 chr20 5964036 5964453 -66189429 + L1HS LINE L1 5739 6155 0 * 24 0 0 0 chr20 5964453 5964477 -66189405 + AT_rich Low_complexity Low_complexity 1 24 0 1141 165 151 58 chr20 5964477 5964904 -66188978 - MSTB1 LTR MaLR -55 377 1 21 36 0 0 chr20 5965297 5965325 -66188557 + AT_rich Low_complexity Low_complexity 1 28 0 15532 158 33 17 chr20 5966033 5968344 -66185538 + L1MA4A LINE L1 857 3131 -3874 858 165 0 15 chr20 5968344 5968477 -66185405 + FLAM_C SINE Alu 1 131 -2 15532 158 33 17 chr20 5968477 5970204 -66183678 + L1MA4A LINE L1 3131 4830 -2175 2271 113 0 3 chr20 5970204 5970504 -66183378 + AluSc SINE Alu 1 299 -10 15532 158 33 17 chr20 5970504 5972513 -66181369 + L1MA4A LINE L1 4830 7003 -2 485 284 152 52 chr20 5972557 5973426 -66180456 + L1 LINE L1 2187 3142 -3004 368 285 85 41 chr20 5973440 5973686 -66180196 + L1 LINE L1 3195 3451 -2695 1141 287 6 33 chr20 5974107 5974473 -66179409 + MER90 LTR ERV1 258 613 -1 1800 181 10 0 chr20 5974588 5974897 -66178985 + AluJb SINE Alu 1 312 0 181 216 27 0 chr20 5975483 5975520 -66178362 - L2 LINE L2 -25 3247 3210 397 326 52 17 chr20 5975529 5975589 -66178293 - MER5A DNA MER1_type -3 186 130 1743 181 3 30 chr20 5975589 5975893 -66177989 - AluJo SINE Alu -16 296 1 397 326 52 17 chr20 5975893 5976004 -66177878 - MER5A DNA MER1_type -59 130 9 304 308 115 0 chr20 5976044 5976148 -66177734 + MER5B DNA MER1_type 1 116 -62 390 331 51 6 chr20 5976181 5976338 -66177544 - MIR SINE MIR -94 168 5 5712 55 1 12 chr20 5977010 5977696 -66176186 - L1PA7 LINE L1 0 6154 5476 8849 80 4 2 chr20 5977700 5978968 -66174914 + L1PA7 LINE L1 4214 5482 -690 464 262 32 24 chr20 5980250 5980376 -66173506 + MER5B DNA MER1_type 4 130 -48 816 193 17 33 chr20 5980382 5980563 -66173319 - MER5B DNA MER1_type 0 178 1 265 86 0 0 chr20 5982669 5982704 -66171178 + U1 snRNA snRNA 1 35 -130 260 367 148 33 chr20 5982814 5983084 -66170798 + L2 LINE L2 2886 3186 -86 688 265 101 14 chr20 5984152 5984502 -66169380 + LTR33 LTR ERVL 49 513 -8 190 306 24 47 chr20 5984916 5985001 -66168881 + L2 LINE L2 2890 2972 -300 2323 148 98 25 chr20 5985205 5985604 -66168278 - MSTA LTR MaLR 0 428 1 9150 158 27 61 chr20 5985604 5987312 -66166570 - MSTA-int LTR MaLR 0 1651 2 51 17 0 0 chr20 5987382 5987440 -66166442 + AT_rich Low_complexity Low_complexity 1 58 0 2268 129 59 38 chr20 5987440 5987812 -66166070 - MSTA LTR MaLR -48 380 1 1229 172 89 41 chr20 5988182 5988628 -66165254 + LTR55 LTR ERV 1 519 -29 818 316 147 41 chr20 5989554 5990212 -66163670 + L2 LINE L2 252 979 -2335 323 244 206 8 chr20 5990601 5990732 -66163150 + MIR SINE MIR 56 212 -50 215 225 14 0 chr20 5990850 5990921 -66162961 + (TGAA)n Simple_repeat Simple_repeat 3 74 0 386 321 23 0 chr20 5991088 5991219 -66162663 - MIR SINE MIR -70 192 59 399 207 23 0 chr20 5991291 5991378 -66162504 - LTR16A LTR ERVL -218 232 144 4433 168 77 37 chr20 5992120 5992949 -66160933 - MER21B LTR ERV1 0 863 2 1683 100 4 13 chr20 5993135 5993365 -66160517 + AluSx SINE Alu 1 228 -84 24 0 0 0 chr20 5993557 5993581 -66160301 + AT_rich Low_complexity Low_complexity 1 24 0 533 206 18 88 chr20 5994202 5994372 -66159510 - L1ME3 LINE L1 -2 6160 6003 263 360 202 0 chr20 5994928 5995131 -66158751 - MIR SINE MIR -5 257 14 1819 194 93 63 chr20 5996105 5996248 -66157634 + MLT2B1 LTR ERVL 1 138 -382 2284 120 37 35 chr20 5996248 5996622 -66157260 + THE1C LTR MaLR 1 375 0 1819 194 93 63 chr20 5996622 5996983 -66156899 + MLT2B1 LTR ERVL 138 520 0 499 218 0 0 chr20 5997075 5997176 -66156706 - MER5A DNA MER1_type -80 109 9 1461 258 52 31 chr20 5997886 5998331 -66155551 - MER115 DNA AcHobo -4 689 236 2742 124 48 10 chr20 5998641 5999053 -66154829 - MSTA LTR MaLR 0 428 1 247 316 0 13 chr20 5999589 5999668 -66154214 + L2 LINE L2 3173 3250 -22 316 257 65 41 chr20 5999786 6000002 -66153880 + MLT1H LTR MaLR 19 247 -162 1376 177 52 72 chr20 6000099 6000404 -66153478 + AluJo SINE Alu 1 299 -13 257 222 14 17 chr20 6000426 6000518 -66153364 + MLT1J2 LTR MaLR 364 624 -2 10566 25 1 0 chr20 6000755 6002743 -66151139 - L1PA3 LINE L1 0 6155 4167 2510 123 9 61 chr20 6002744 6003080 -66150802 - MER34B LTR ERV1 -163 402 91 2231 115 0 13 chr20 6003080 6003385 -66150497 - AluSx SINE Alu -11 301 1 2510 123 9 61 chr20 6003385 6003472 -66150410 - MER34B LTR ERV1 -474 91 1 184 143 0 24 chr20 6003588 6003630 -66150252 + L2 LINE L2 3273 3313 0 339 224 122 0 chr20 6003653 6003760 -66150122 - MIR3 SINE MIR -49 159 40 323 286 0 0 chr20 6003819 6003896 -66149986 + MER94 DNA DNA 2 78 -56 5582 153 16 19 chr20 6003896 6004014 -66149868 + L1PB3 LINE L1 4793 4910 -1244 2380 93 6 0 chr20 6004014 6004325 -66149557 - AluSp SINE Alu 0 313 1 5582 153 16 19 chr20 6004325 6005582 -66148300 + L1PB3 LINE L1 4910 6153 -1 2062 147 7 85 chr20 6005684 6005871 -66148011 + MLT1B LTR MaLR 1 138 -252 1598 183 52 3 chr20 6005871 6006161 -66147721 + AluJb SINE Alu 5 308 -4 2062 147 7 85 chr20 6006161 6006396 -66147486 + MLT1B LTR MaLR 138 390 0 837 308 61 8 chr20 6006521 6006881 -66147001 + MLT2F LTR ERVL 4 382 -281 * 1791 175 64 63 chr20 6006875 6007277 -66146605 - MLT1D LTR MaLR -82 385 3 566 292 139 17 chr20 6007609 6007962 -66145920 + HAL1 LINE L1 2074 2469 -38 2240 114 0 64 chr20 6008988 6009348 -66144534 - MER1B DNA MER1_type 0 337 1 2273 102 0 0 chr20 6010601 6010908 -66142974 + AluSx SINE Alu 1 307 0 475 285 50 53 chr20 6011057 6011284 -66142598 - MIR SINE MIR -14 248 22 1129 209 0 5 chr20 6011558 6011769 -66142113 + MER63A DNA MER1_type 1 210 0 2095 139 0 3 chr20 6012082 6012385 -66141497 + AluSx SINE Alu 1 302 -10 2412 103 0 0 chr20 6013189 6013501 -66140381 - AluSx SINE Alu 0 312 1 2389 173 48 52 chr20 6015713 6016229 -66137653 - MLT2B2 LTR ERVL 0 515 2 743 164 0 16 chr20 6018354 6018482 -66135400 + FLAM_C SINE Alu 1 126 -17 433 305 108 0 chr20 6018684 6018851 -66135031 + MIR SINE MIR 4 188 -74 3773 221 73 44 chr20 6019100 6019816 -66134066 - L1MC3 LINE L1 0 7807 7113 192 97 0 0 chr20 6019816 6019847 -66134035 + (TTTA)n Simple_repeat Simple_repeat 4 34 0 3773 221 73 44 chr20 6019847 6020580 -66133302 - L1MC3 LINE L1 -694 7113 6403 342 0 0 0 chr20 6020580 6020618 -66133264 + (TC)n Simple_repeat Simple_repeat 2 39 0 * 369 0 0 0 chr20 6020617 6020658 -66133224 + (TA)n Simple_repeat Simple_repeat 1 41 0 3773 221 73 44 chr20 6020618 6020812 -66133070 - L1MC3 LINE L1 -1404 6403 6272 2253 124 0 0 chr20 6021096 6021395 -66132487 + AluSx SINE Alu 1 299 -13 7734 129 2 11 chr20 6021653 6022630 -66131252 - L1PA10 LINE L1 0 6168 5184 2283 120 0 3 chr20 6022630 6022938 -66130944 - AluSg SINE Alu -3 307 1 7734 129 2 11 chr20 6022938 6023946 -66129936 - L1PA10 LINE L1 -984 5184 4185 5657 144 1 7 chr20 6023946 6024868 -66129014 + L1PA10 LINE L1 3261 4177 -1969 2155 128 103 30 chr20 6025964 6026363 -66127519 + MSTA LTR MaLR 1 428 0 22 70 0 0 chr20 6026888 6026931 -66126951 + AT_rich Low_complexity Low_complexity 1 43 0 216 182 23 0 chr20 6027548 6027592 -66126290 + MIR SINE MIR 108 152 -56 2114 217 97 4 chr20 6028500 6028984 -66124898 - MLT1F LTR MaLR -13 529 1 2138 117 0 0 chr20 6029909 6030222 -66123660 - AluSg SINE Alu 0 313 1 186 289 12 36 chr20 6030328 6030411 -66123471 - MIR SINE MIR -56 206 126 34 42 0 0 chr20 6030621 6030669 -66123213 + AT_rich Low_complexity Low_complexity 1 48 0 212 274 69 10 chr20 6031255 6031357 -66122525 - MIR SINE MIR -65 143 36 493 107 0 12 chr20 6031449 6031533 -66122349 - Alu SINE Alu 0 312 230 2647 153 35 31 chr20 6032377 6032806 -66121076 - LTR34 LTR ERV1 0 699 266 2217 117 0 16 chr20 6032806 6032943 -66120939 + AluSx SINE Alu 1 139 -173 2281 116 10 0 chr20 6032943 6033245 -66120637 + AluSq SINE Alu 1 305 -8 2217 117 0 16 chr20 6033245 6033414 -66120468 + AluSx SINE Alu 139 302 -10 2647 153 35 31 chr20 6033414 6033466 -66120416 - LTR34 LTR ERV1 -433 266 216 1669 174 17 17 chr20 6033466 6033760 -66120122 - MER41D LTR ERV1 0 557 264 667 143 29 0 chr20 6033762 6033867 -66120015 + FLAM_C SINE Alu 11 118 -25 252 156 0 0 chr20 6033891 6033914 -66119968 + A-rich Low_complexity Low_complexity 1 23 -22 2542 68 0 0 chr20 6033914 6034225 -66119657 + AluY SINE Alu 1 311 0 252 156 0 0 chr20 6034225 6034246 -66119636 + A-rich Low_complexity Low_complexity 22 45 0 1509 185 9 56 chr20 6034251 6034570 -66119312 + AluJb SINE Alu 1 304 -8 320 176 15 0 chr20 6034577 6034645 -66119237 + GA-rich Low_complexity Low_complexity 3 71 0 1781 138 4 0 chr20 6034647 6034916 -66118966 - MER41D LTR ERV1 -283 274 5 1347 106 63 0 chr20 6034913 6035120 -66118762 - LTR34 LTR ERV1 -479 220 1 * 204 40 0 0 chr20 6035353 6035378 -66118504 + (CCCCCT)n Simple_repeat Simple_repeat 4 28 0 6352 61 5 290 chr20 6035382 6037213 -66116669 + SVA Other Other 61 1369 -17 414 0 0 0 chr20 6037220 6037266 -66116616 + (TA)n Simple_repeat Simple_repeat 2 47 0 7340 124 41 65 chr20 6037292 6037658 -66116224 - LTR49-int LTR ERV1 -352 5979 5606 2215 106 3 0 chr20 6037658 6037941 -66115941 + AluSx SINE Alu 1 284 -28 7340 124 41 65 chr20 6037941 6038167 -66115715 - LTR49-int LTR ERV1 -725 5606 5376 1460 178 94 7 chr20 6038167 6038443 -66115439 - AluJo SINE Alu 0 302 3 7340 124 41 65 chr20 6038443 6038590 -66115292 - LTR49-int LTR ERV1 -955 5376 5227 1834 160 3 20 chr20 6038590 6038896 -66114986 + AluJb SINE Alu 1 301 -11 7340 124 41 65 chr20 6038896 6039326 -66114556 - LTR49-int LTR ERV1 -1104 5227 4788 2397 94 0 3 chr20 6039326 6039623 -66114259 + AluSx SINE Alu 1 296 -16 7340 124 41 65 chr20 6039623 6039769 -66114113 - LTR49-int LTR ERV1 -1543 4788 4694 1775 179 7 3 chr20 6039769 6040070 -66113812 - AluJb SINE Alu -10 302 1 7340 124 41 65 chr20 6040070 6040145 -66113737 - LTR49-int LTR ERV1 -1637 4694 4619 31490 111 15 56 chr20 6040145 6041287 -66112595 - L1PA8 LINE L1 -2 6170 4982 2302 113 0 0 chr20 6041287 6041587 -66112295 - AluSq SINE Alu -13 300 1 31490 111 15 56 chr20 6041587 6046883 -66106999 - L1PA8 LINE L1 -1190 4982 7 3379 129 19 19 chr20 6046885 6047480 -66106402 - LTR49-int LTR ERV1 -1700 4631 4037 1427 171 24 120 chr20 6047534 6048145 -66105737 + MER52A LTR ERV1 660 1349 -406 325 238 14 61 chr20 6048124 6048271 -66105611 + LTR28 LTR ERV1 577 716 -304 * 2087 217 65 46 chr20 6048245 6048784 -66105098 + MER52A LTR ERV1 1207 1755 0 330 305 61 12 chr20 6049858 6050022 -66103860 - MIR SINE MIR 0 262 91 201 341 0 33 chr20 6050112 6050203 -66103679 - MER5A DNA MER1_type -44 145 58 755 255 62 42 chr20 6050241 6050478 -66103404 + MLT1G1 LTR MaLR 4 198 -369 310 142 19 213 chr20 6050577 6050650 -66103232 - L1ME3A LINE L1 -18 6152 6123 2384 106 0 6 chr20 6050650 6050961 -66102921 - AluSq SINE Alu -4 309 1 310 142 19 213 chr20 6050961 6051042 -66102840 - L1ME3A LINE L1 -47 6123 6028 * 3437 154 53 44 chr20 6051008 6051765 -66102117 + L1MB3 LINE L1 5259 6016 -167 196 271 94 0 chr20 6051786 6051871 -66102011 + MIR SINE MIR 40 132 -76 1144 166 0 44 chr20 6051939 6052144 -66101738 + AluJb SINE Alu 111 306 -6 325 331 48 14 chr20 6052787 6052932 -66100950 + MER5B DNA MER1_type 17 166 -12 221 232 0 93 chr20 6052998 6053149 -66100733 + (CACCAT)n Simple_repeat Simple_repeat 4 140 0 468 203 198 56 chr20 6055225 6055379 -66098503 - ORSL DNA AcHobo -9 266 135 2136 110 7 0 chr20 6055379 6055671 -66098211 - AluY SINE Alu -16 295 2 468 203 198 56 chr20 6055671 6055748 -66098134 - ORSL DNA AcHobo -140 135 2 193 284 20 69 chr20 6055800 6055902 -66097980 - L2 LINE L2 -2111 1203 1107 375 281 79 9 chr20 6058112 6058226 -66095656 + MIR SINE MIR 45 166 -96 7395 51 1 0 chr20 6059049 6060208 -66093674 + L1PA5 LINE L1 4995 6154 0 227 304 83 83 chr20 6060661 6060937 -66092945 - L2 LINE L2 -30 3242 2967 2182 120 7 13 chr20 6061091 6061391 -66092491 + AluSx SINE Alu 1 298 -14 22 0 0 0 chr20 6061930 6061952 -66091930 + AT_rich Low_complexity Low_complexity 1 22 0 782 196 0 7 chr20 6062094 6062232 -66091650 - AluJb SINE Alu -18 294 158 2200 173 40 43 chr20 6062232 6062378 -66091504 + L1M4 LINE L1 4973 5118 -1066 1696 160 0 67 chr20 6062378 6062691 -66091191 + AluJo SINE Alu 1 292 -20 2200 173 40 43 chr20 6062691 6063150 -66090732 + L1M4 LINE L1 5118 5577 -607 1944 155 3 16 chr20 6063150 6063454 -66090428 + AluJb SINE Alu 1 300 -12 2200 173 40 43 chr20 6063454 6063520 -66090362 + L1M4 LINE L1 5577 5642 -542 2286 88 3 3 chr20 6063520 6063832 -66090050 + AluSq SINE Alu 1 312 0 2200 173 40 43 chr20 6063832 6064009 -66089873 + L1M4 LINE L1 5642 5819 -365 267 254 15 15 chr20 6064014 6064081 -66089801 + AluS SINE Alu 1 67 -236 253 123 154 46 chr20 6064192 6064257 -66089625 - MER51A LTR ERV1 -94 540 469 546 270 8 0 chr20 6064532 6064658 -66089224 - MER89-int LTR ERV1 0 7816 7690 1104 318 45 37 chr20 6064871 6065673 -66088209 - MER89-int LTR ERV1 -1488 6268 5461 21 0 0 0 chr20 6066850 6066871 -66087011 + GC_rich Low_complexity Low_complexity 1 21 0 329 278 56 56 chr20 6067198 6067342 -66086540 + HAL1 LINE L1 2363 2506 -1 279 321 128 14 chr20 6067639 6067935 -66085947 + LTR16B LTR ERVL 124 453 -11 203 313 83 90 chr20 6069811 6070099 -66083783 - L2 LINE L2 -30 3242 2957 2214 110 0 3 chr20 6070446 6070738 -66083144 - AluSg SINE Alu -14 296 6 32 0 0 0 chr20 6071258 6071290 -66082592 + AT_rich Low_complexity Low_complexity 1 32 0 1268 322 58 7 chr20 6071335 6072180 -66081702 - HERVL40 LTR ERVL -431 5333 4417 2842 314 42 14 chr20 6072198 6073141 -66080741 - HERVL40 LTR ERVL -1947 3707 2703 2485 100 3 0 chr20 6073141 6073452 -66080430 - AluSp SINE Alu -1 312 1 2842 314 42 14 chr20 6073452 6073912 -66079970 - HERVL40 LTR ERVL -2951 2703 2258 2097 201 91 20 chr20 6073927 6074077 -66079805 - REP3 LTR ERV -30 532 394 447 19 0 0 chr20 6074077 6074129 -66079753 + (CA)n Simple_repeat Simple_repeat 2 53 0 2097 201 91 20 chr20 6074129 6074475 -66079407 - REP3 LTR ERV -168 394 1 409 333 0 0 chr20 6074691 6074817 -66079065 - MER89-int LTR ERV1 -406 6395 6270 379 342 54 43 chr20 6075898 6076343 -66077539 - HERVL40 LTR ERVL -2307 3223 2774 290 233 0 0 chr20 6077125 6077185 -66076697 + MER77 LTR ERV1 9 68 -537 52 0 0 0 chr20 6077353 6077405 -66076477 + AT_rich Low_complexity Low_complexity 1 52 0 1191 167 5 10 chr20 6078263 6078502 -66075380 - AluJb SINE Alu 0 330 93 614 192 0 0 chr20 6078568 6078667 -66075215 - AluJb SINE Alu -213 99 1 202 298 138 11 chr20 6078825 6078919 -66074963 + L2 LINE L2 3137 3242 -30 599 175 15 216 chr20 6078964 6079233 -66074649 - MER51A LTR ERV1 0 640 426 295 298 144 33 chr20 6080497 6080796 -66073086 - LTR16B LTR ERVL -9 455 124 180 211 56 100 chr20 6082085 6082175 -66071707 + MIR SINE MIR 63 148 -114 292 299 28 19 chr20 6083401 6083508 -66070374 - MIR SINE MIR -121 141 34 185 281 16 94 chr20 6085706 6085834 -66068048 + L2 LINE L2 1107 1224 -2090 470 197 171 63 chr20 6085860 6085937 -66067945 + ORSL DNA AcHobo 2 69 -206 2249 110 7 0 chr20 6085937 6086245 -66067637 + AluY SINE Alu 2 311 0 470 197 171 63 chr20 6086245 6086301 -66067581 + ORSL DNA AcHobo 69 118 -157 2287 56 42 7 chr20 6086301 6086586 -66067296 + AluY SINE Alu 1 295 -16 470 197 171 63 chr20 6086586 6086690 -66067192 + ORSL DNA AcHobo 118 266 -9 694 153 0 30 chr20 6087855 6087916 -66065966 - L1MB7 LINE L1 -10 6174 6113 1926 120 0 57 chr20 6087916 6088242 -66065640 + AluSx SINE Alu 1 309 0 694 153 0 30 chr20 6088242 6088310 -66065572 - L1MB7 LINE L1 -71 6113 6048 452 167 0 13 chr20 6088318 6088396 -66065486 - FLAM SINE Alu -23 120 44 2328 179 45 34 chr20 6088473 6088711 -66065171 - L1MB7 LINE L1 -366 5818 5584 1704 174 54 7 chr20 6088711 6088892 -66064990 - AluJb SINE Alu 0 312 110 321 47 0 0 chr20 6088892 6088935 -66064947 + (TTTG)n Simple_repeat Simple_repeat 4 46 0 1704 174 54 7 chr20 6088935 6089051 -66064831 - AluJb SINE Alu -202 110 1 2328 179 45 34 chr20 6089051 6089488 -66064394 - L1MB7 LINE L1 -600 5584 5137 1591 152 4 43 chr20 6089506 6089783 -66064099 - AluJo SINE Alu -15 297 32 1099 360 3 33 chr20 6090036 6090339 -66063543 - AluJo SINE Alu -8 294 1 855 310 6 12 chr20 6091793 6091964 -66061918 - AluJb SINE Alu -12 300 131 463 274 0 0 chr20 6091983 6092056 -66061826 + AluS SINE Alu 3 75 -234 756 359 0 40 chr20 6092056 6092254 -66061628 + AluSp SINE Alu 120 309 -4 244 265 0 0 chr20 6093290 6093339 -66060543 + (TG)n Simple_repeat Simple_repeat 2 50 0 1178 281 10 46 chr20 6094649 6094952 -66058930 - AluJb SINE Alu -10 302 11 691 396 12 60 chr20 6095708 6095958 -66057924 - AluJo SINE Alu -20 292 55 1206 313 0 51 chr20 6096088 6096401 -66057481 + AluSx SINE Alu 3 299 -3 789 239 6 34 chr20 6096447 6096623 -66057259 + FRAM SINE Alu 1 167 -9 1211 317 4 15 chr20 6097297 6097556 -66056326 - AluJo SINE Alu -44 268 13 1397 341 0 26 chr20 6097584 6097889 -66055993 - AluSq SINE Alu -16 297 1 182 185 0 0 chr20 6098601 6098628 -66055254 + polypyrimidine Low_complexity Low_complexity 2 28 0 246 114 0 0 chr20 6099584 6099619 -66054263 - AluJo SINE Alu -264 35 1 182 250 0 18 chr20 6099620 6099676 -66054206 - MIR SINE MIR -60 202 148 2156 101 29 0 chr20 6099691 6099969 -66053913 + AluSx SINE Alu 11 296 -16 2234 114 3 3 chr20 6100404 6100702 -66053180 + AluSc SINE Alu 1 298 -11 2289 96 3 0 chr20 6100735 6101027 -66052855 + AluSx SINE Alu 1 293 -19 2243 130 3 0 chr20 6101396 6101704 -66052178 - AluSx SINE Alu -3 309 1 1331 163 45 0 chr20 6102025 6102270 -66051612 - L1 LINE L1 -811 5335 5080 1843 137 10 3 chr20 6102272 6102571 -66051311 + AluSx SINE Alu 1 301 -11 2281 88 0 3 chr20 6102616 6102921 -66050961 + AluSg SINE Alu 1 304 -6 2286 100 0 0 chr20 6103024 6103333 -66050549 - AluSc SINE Alu 0 309 1 2325 100 0 0 chr20 6103336 6103646 -66050236 - AluSx SINE Alu 0 312 3 1098 182 0 0 chr20 6103649 6103847 -66050035 + AluJb SINE Alu 106 303 -9 3638 138 60 31 chr20 6104333 6104623 -66049259 + LTR8 LTR ERV1 1 281 -410 1549 125 0 0 chr20 6104623 6104847 -66049035 + AluSx SINE Alu 54 277 -35 192 40 0 0 chr20 6104847 6104872 -66049010 + (CAA)n Simple_repeat Simple_repeat 3 27 0 3638 138 60 31 chr20 6104872 6105252 -66048630 + LTR8 LTR ERV1 280 691 0 438 316 92 57 chr20 6105540 6105910 -66047972 - L2 LINE L2 0 3272 2890 2162 98 3 0 chr20 6105911 6106233 -66047649 + AluSx SINE Alu 3 312 0 1423 156 240 73 chr20 6106374 6106611 -66047271 + LTR54 LTR ERV1 1 197 -313 1727 144 45 0 chr20 6106611 6106902 -66046980 + AluSx SINE Alu 1 304 -8 1423 156 240 73 chr20 6106902 6107101 -66046781 + LTR54 LTR ERV1 197 510 0 22 0 0 0 chr20 6107227 6107249 -66046633 + AT_rich Low_complexity Low_complexity 1 22 0 2521 33 0 0 chr20 6107259 6107558 -66046324 + AluY SINE Alu 1 299 -12 670 191 0 23 chr20 6107558 6107681 -66046201 - FLAM_C SINE Alu -186 126 5 2174 84 14 0 chr20 6107697 6107994 -66045888 - AluSp SINE Alu -10 303 3 1571 145 27 37 chr20 6107999 6108295 -66045587 - AluJb SINE Alu -19 293 1 847 178 0 6 chr20 6108991 6109154 -66044728 + FRAM SINE Alu 1 162 -14 843 236 52 40 chr20 6109161 6109411 -66044471 - L1MB7 LINE L1 -68 6116 5864 1911 122 0 30 chr20 6109442 6109745 -66044137 - AluSg SINE Alu -16 294 1 2398 171 26 99 chr20 6109802 6110254 -66043628 - MER4D LTR ERV1 0 903 510 2036 145 0 0 chr20 6110254 6110564 -66043318 + AluSx SINE Alu 1 310 -2 2398 171 26 99 chr20 6110564 6110756 -66043126 - MER4D LTR ERV1 -393 510 306 1052 150 6 6 chr20 6110756 6110923 -66042959 - AluSg/x SINE Alu -12 298 132 2074 120 0 13 chr20 6110923 6111239 -66042643 - AluSx SINE Alu 0 312 1 493 132 53 63 chr20 6111243 6111439 -66042443 - MER4D LTR ERV1 -566 347 70 725 139 0 41 chr20 6111464 6111546 -66042336 - FLAM_C SINE Alu -194 118 41 2248 202 48 60 chr20 6111546 6112165 -66041717 + LTR9 LTR ERV1 1 612 0 725 139 0 41 chr20 6112165 6112204 -66041678 - FLAM_C SINE Alu -271 41 2 809 118 14 69 chr20 6112207 6112257 -66041625 - MER4D LTR ERV1 -664 239 188 1996 133 0 0 chr20 6112257 6112551 -66041331 - AluJb SINE Alu -18 294 1 809 118 14 69 chr20 6112551 6112644 -66041238 - MER4D LTR ERV1 -715 188 104 1269 128 63 48 chr20 6112644 6112914 -66040968 - MER4D LTR ERV1 0 903 534 2399 84 0 0 chr20 6112914 6113225 -66040657 + AluSx SINE Alu 1 311 -1 1269 128 63 48 chr20 6113225 6113365 -66040517 - MER4D LTR ERV1 -369 534 398 1936 146 3 1 chr20 6113365 6113673 -66040209 + MER1B DNA MER1_type 1 339 0 2191 110 3 0 chr20 6113689 6113998 -66039884 - AluSp SINE Alu -2 311 2 2063 130 19 6 chr20 6113998 6114320 -66039562 - MER4D LTR ERV1 -505 398 73 807 132 0 8 chr20 6114320 6114441 -66039441 + FLAM_C SINE Alu 12 131 -12 1109 204 71 19 chr20 6114489 6114812 -66039070 - L1M4 LINE L1 -1573 4573 4234 793 182 149 0 chr20 6114819 6114973 -66038909 - AluSp SINE Alu 0 313 137 1270 209 107 133 chr20 6114974 6115201 -66038681 - L1M4 LINE L1 -1903 4243 4012 1748 153 36 23 chr20 6115201 6115509 -66038373 - AluSx SINE Alu 0 312 1 1270 209 107 133 chr20 6115509 6115740 -66038142 - L1M4 LINE L1 -2134 4012 3805 2231 106 0 0 chr20 6115740 6116043 -66037839 - AluSq SINE Alu -10 303 1 1270 209 107 133 chr20 6116043 6116254 -66037628 - L1M4 LINE L1 -2341 3805 3590 491 143 22 0 chr20 6116439 6116530 -66037352 + GA-rich Low_complexity Low_complexity 5 97 0 2091 125 0 7 chr20 6116554 6116859 -66037023 - AluSg SINE Alu -7 303 1 2110 103 3 3 chr20 6117092 6117393 -66036489 - AluSg SINE Alu -9 301 1 1706 144 14 4 chr20 6117399 6117677 -66036205 - AluSx SINE Alu -7 305 25 1646 170 0 24 chr20 6117687 6117981 -66035901 - AluJb SINE Alu -25 287 1 460 185 65 146 chr20 6117984 6118244 -66035638 - L1MC4 LINE L1 0 8042 7804 264 308 142 73 chr20 6118245 6118551 -66035331 - L2 LINE L2 -1611 1703 1419 2145 118 0 0 chr20 6118551 6118855 -66035027 + AluSx SINE Alu 1 304 -8 264 308 142 73 chr20 6118855 6119205 -66034677 - L2 LINE L2 -1895 1419 1002 2901 65 3 0 chr20 6119209 6119576 -66034306 + L1PA8 LINE L1 5805 6172 0 181 286 36 48 chr20 6119722 6119748 -66034134 - MIR SINE MIR -32 230 205 2263 97 0 0 chr20 6119748 6120048 -66033834 - AluSx SINE Alu -12 300 1 181 286 36 48 chr20 6120048 6120105 -66033777 - MIR SINE MIR -57 205 148 2015 101 29 0 chr20 6120120 6120398 -66033484 + AluSx SINE Alu 11 296 -16 2171 104 3 3 chr20 6120833 6121132 -66032750 + AluSc SINE Alu 1 299 -10 2164 72 58 0 chr20 6121165 6121456 -66032426 + AluSp SINE Alu 1 308 -5 212 208 0 75 chr20 6121461 6121483 -66032399 - MIR SINE MIR -92 170 148 2993 121 26 2 chr20 6121483 6121937 -66031945 + MER4C LTR ERV1 1 465 0 212 208 0 75 chr20 6121937 6121967 -66031915 - MIR SINE MIR -114 148 122 2068 102 0 57 chr20 6121967 6122281 -66031601 + AluSx SINE Alu 1 296 -16 337 311 0 11 chr20 6122281 6122371 -66031511 - L1MC4 LINE L1 -1340 6702 6614 * 399 257 76 9 chr20 6122291 6122396 -66031486 + L1MC4 LINE L1 6610 6721 -1321 357 232 24 12 chr20 6122397 6122479 -66031403 - MIR SINE MIR -146 116 34 1348 196 0 33 chr20 6122548 6122824 -66031058 + AluJo SINE Alu 1 267 -45 848 140 0 0 chr20 6123205 6123341 -66030541 - FLAM_C SINE Alu -1 142 7 2125 104 0 25 chr20 6123371 6123688 -66030194 - AluSg SINE Alu -1 309 1 836 134 0 8 chr20 6123925 6124059 -66029823 - AluSq/x SINE Alu -179 133 1 591 216 145 30 chr20 6124630 6124846 -66029036 + MIR SINE MIR 11 250 -12 779 181 0 0 chr20 6124912 6125045 -66028837 - FLAM_C SINE Alu 0 133 1 1512 157 18 28 chr20 6125263 6125578 -66028304 - AluJo SINE Alu 0 312 1 2066 119 3 3 chr20 6126113 6126415 -66027467 - AluSx SINE Alu -10 302 1 264 281 265 22 chr20 6126534 6126719 -66027163 + L2 LINE L2 3029 3258 -14 413 150 0 0 chr20 6126948 6127008 -66026874 - tRNA-Gly-GGA tRNA tRNA -1 74 15 1743 167 7 7 chr20 6127042 6127347 -66026535 - AluJo SINE Alu -7 305 1 14503 120 36 60 chr20 6127563 6127862 -66026020 - Tigger7 DNA MER2_type 0 2487 2182 2370 88 0 0 chr20 6127862 6128167 -66025715 + AluSq SINE Alu 1 305 -8 14503 120 36 60 chr20 6128167 6130004 -66023878 - Tigger7 DNA MER2_type -305 2182 419 2225 106 0 3 chr20 6130004 6130316 -66023566 - AluSq SINE Alu -2 311 1 14503 120 36 60 chr20 6130316 6130726 -66023156 - Tigger7 DNA MER2_type -2068 419 1 905 137 0 0 chr20 6130774 6130913 -66022969 + FLAM_C SINE Alu 5 143 0 195 42 0 0 chr20 6131775 6131799 -66022083 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 513 300 67 38 chr20 6131839 6132049 -66021833 + MIR SINE MIR 47 262 0 2308 93 3 0 chr20 6132062 6132372 -66021510 + AluSq SINE Alu 1 311 -2 2298 113 126 5 chr20 6132594 6132976 -66020906 - MSTA LTR MaLR 0 428 1 193 302 16 0 chr20 6132986 6133049 -66020833 - L3b LINE CR1 -340 1243 1180 1612 153 3 14 chr20 6133186 6133473 -66020409 - AluJo SINE Alu -18 294 11 621 277 79 5 chr20 6133803 6134005 -66019877 + MIR SINE MIR 33 249 -13 2098 95 3 38 chr20 6134064 6134379 -66019503 - AluSx SINE Alu -8 304 1 1015 200 121 17 chr20 6134380 6134620 -66019262 - MLT1A1 LTR MaLR -11 354 90 2064 104 0 0 chr20 6134621 6134908 -66018974 + AluSx SINE Alu 1 287 -25 402 238 65 138 chr20 6135040 6135131 -66018751 - MIR SINE MIR 0 262 166 2194 107 3 0 chr20 6135131 6135429 -66018453 - AluSx SINE Alu -13 299 1 402 238 65 138 chr20 6135429 6135568 -66018314 - MIR SINE MIR -96 166 49 1222 186 79 52 chr20 6135583 6135873 -66018009 - AluJo SINE Alu -14 298 1 225 214 0 114 chr20 6136177 6136247 -66017635 + AluJb SINE Alu 1 62 -240 1954 57 0 42 chr20 6136249 6136512 -66017370 - AluY SINE Alu -4 307 56 1561 141 8 16 chr20 6136514 6136762 -66017120 + AluJb SINE Alu 54 299 -13 1959 142 3 0 chr20 6137061 6137357 -66016525 + AluSx SINE Alu 1 297 -15 2133 125 3 0 chr20 6138107 6138418 -66015464 - AluSx SINE Alu 0 312 1 926 203 0 0 chr20 6139394 6139552 -66014330 + FRAM SINE Alu 3 160 -6 2022 113 0 3 chr20 6139627 6139919 -66013963 - AluSx SINE Alu -21 291 1 2077 116 3 0 chr20 6141361 6141664 -66012218 - AluSx SINE Alu -8 304 1 2227 85 10 3 chr20 6142010 6142316 -66011566 + AluSx SINE Alu 1 308 -4 285 313 49 12 chr20 6142329 6142411 -66011471 - MIR SINE MIR -55 153 68 21 36 0 0 chr20 6142552 6142580 -66011302 + AT_rich Low_complexity Low_complexity 1 28 0 2469 48 3 0 chr20 6142580 6142890 -66010992 - AluY SINE Alu 0 311 1 523 299 62 22 chr20 6143375 6143599 -66010283 - MIR SINE MIR -12 250 18 2310 93 0 0 chr20 6143654 6143954 -66009928 + AluSx SINE Alu 1 300 -12 3259 94 11 18 chr20 6144170 6144435 -66009447 + MER39B LTR ERV1 1 263 -390 1692 174 13 19 chr20 6144435 6144746 -66009136 + AluJo SINE Alu 1 309 -3 3259 94 11 18 chr20 6144746 6144937 -66008945 + MER39B LTR ERV1 263 454 -199 460 215 14 93 chr20 6144943 6145105 -66008777 - L1MDb LINE L1 -5753 656 452 1114 138 64 15 chr20 6145125 6145328 -66008554 + MER39B LTR ERV1 441 653 0 296 157 20 0 chr20 6145801 6145852 -66008030 + L2 LINE L2 3221 3272 0 1895 114 26 19 chr20 6146991 6147298 -66006584 + AluSx SINE Alu 2 310 -2 2256 103 0 0 chr20 6147435 6147735 -66006147 + AluSq SINE Alu 1 300 -13 4600 193 103 29 chr20 6147755 6148588 -66005294 + L1MDb LINE L1 3 773 -5636 2151 101 0 3 chr20 6148588 6148894 -66004988 - AluSx SINE Alu -7 305 1 4600 193 103 29 chr20 6148894 6149021 -66004861 + L1MDb LINE L1 773 889 -5520 1622 189 0 0 chr20 6149021 6149302 -66004580 + AluJo SINE Alu 1 281 -31 4600 193 103 29 chr20 6149302 6149427 -66004455 + L1MDb LINE L1 889 1003 -5406 1843 145 7 3 chr20 6149427 6149731 -66004151 + AluJb SINE Alu 5 309 -3 4600 193 103 29 chr20 6149731 6149760 -66004122 + L1MDb LINE L1 1003 1202 -5207 876 188 4 5 chr20 6149763 6149954 -66003928 + L1M4 LINE L1 5127 5316 -839 2863 176 33 58 chr20 6149962 6150548 -66003334 - L1M3 LINE L1 -634 5537 4938 1750 128 0 0 chr20 6150548 6150806 -66003076 - AluSx SINE Alu 0 312 55 2863 176 33 58 chr20 6150806 6150838 -66003044 - L1M3 LINE L1 -1233 4938 4907 1847 126 0 4 chr20 6150838 6151115 -66002767 - AluSx SINE Alu -36 276 1 2863 176 33 58 chr20 6151115 6151396 -66002486 - L1M3 LINE L1 -1264 4907 4666 2010 109 7 7 chr20 6151876 6152150 -66001732 - AluSq SINE Alu -39 274 1 646 229 6 59 chr20 6152227 6152397 -66001485 + MIR SINE MIR 32 192 -70 2162 121 0 0 chr20 6153097 6153408 -66000474 + AluSx SINE Alu 1 311 0 2250 116 0 10 chr20 6153455 6153765 -66000117 + AluSx SINE Alu 1 307 -5 2555 50 0 35 chr20 6153840 6154157 -65999725 + AluY SINE Alu 1 306 -5 2073 139 0 7 chr20 6154685 6154988 -65998894 + AluJb SINE Alu 1 301 -11 213 203 47 31 chr20 6155300 6155364 -65998518 + GA-rich Low_complexity Low_complexity 4 68 0 1873 166 0 7 chr20 6155419 6155721 -65998161 + AluJo SINE Alu 1 300 -12 965 218 95 93 chr20 6156072 6156445 -65997437 - MLT1H1 LTR MaLR 0 555 184 2446 74 7 0 chr20 6156445 6156742 -65997140 - AluY SINE Alu -12 299 1 965 218 95 93 chr20 6156742 6156753 -65997129 - MLT1H1 LTR MaLR -371 184 175 2164 68 0 4 chr20 6156753 6157018 -65996864 - AluY SINE Alu -7 304 41 965 218 95 93 chr20 6157018 6157042 -65996840 - MLT1H1 LTR MaLR -380 175 153 1902 136 0 60 chr20 6157042 6157358 -65996524 + AluJb SINE Alu 1 297 -15 965 218 95 93 chr20 6157358 6157388 -65996494 - MLT1H1 LTR MaLR -402 153 114 1753 176 0 40 chr20 6157430 6157754 -65996128 - AluJb SINE Alu -1 311 1 301 189 37 0 chr20 6157761 6157825 -65996057 - MLT1H LTR MaLR -409 140 1 1174 145 34 24 chr20 6158144 6158351 -65995531 + MER20 DNA MER1_type 1 209 -10 23 33 0 0 chr20 6158521 6158551 -65995331 + AT_rich Low_complexity Low_complexity 1 30 0 2138 105 27 0 chr20 6158552 6158846 -65995036 + AluSx SINE Alu 1 302 -10 201 303 0 0 chr20 6158945 6159011 -65994871 + (TATG)n Simple_repeat Simple_repeat 2 67 0 335 229 60 0 chr20 6159079 6159162 -65994720 - MLT1I LTR MaLR -8 401 314 2233 115 7 0 chr20 6159212 6159516 -65994366 - AluSq SINE Alu -7 306 1 718 279 32 9 chr20 6160487 6160706 -65993176 + MIR SINE MIR 35 258 -4 192 152 0 0 chr20 6160748 6160781 -65993101 + CT-rich Low_complexity Low_complexity 4 36 0 1058 161 8 3 chr20 6160782 6161021 -65992861 - AluJb SINE Alu -5 307 2 1852 161 16 26 chr20 6161298 6161609 -65992273 - AluJo SINE Alu -4 308 1 2348 93 0 16 chr20 6161729 6162041 -65991841 + AluSc SINE Alu 1 307 -2 1697 132 0 13 chr20 6162169 6162404 -65991478 + AluSx SINE Alu 1 232 -80 2142 99 4 0 chr20 6163310 6163582 -65990300 - AluSp SINE Alu -25 288 16 2177 128 0 0 chr20 6163743 6164041 -65989841 - AluSx SINE Alu -14 298 1 764 207 0 0 chr20 6164170 6164305 -65989577 - AluJo SINE Alu -177 135 1 344 118 59 12 chr20 6165434 6165519 -65988363 + CT-rich Low_complexity Low_complexity 4 92 0 1224 193 57 11 chr20 6165520 6165784 -65988098 - AluJo SINE Alu -8 304 29 1981 125 50 0 chr20 6166140 6166420 -65987462 + AluSg SINE Alu 1 294 -16 299 274 0 12 chr20 6166490 6166574 -65987308 + (CATA)n Simple_repeat Simple_repeat 4 86 0 566 250 83 43 chr20 6166588 6166848 -65987034 - L1ME1 LINE L1 -229 5937 5667 937 161 73 69 chr20 6167797 6168015 -65985867 + MER20 DNA MER1_type 1 219 0 2354 95 0 0 chr20 6168117 6168412 -65985470 + AluSg SINE Alu 1 295 -15 226 318 155 20 chr20 6168499 6168647 -65985235 + MIR3 SINE MIR 34 201 -7 1864 137 41 20 chr20 6168752 6169044 -65984838 + AluSx SINE Alu 1 298 -14 1919 161 0 3 chr20 6169713 6170011 -65983871 + AluJo SINE Alu 1 297 -15 547 262 43 0 chr20 6170032 6170173 -65983709 + MIR SINE MIR 57 203 -59 318 106 0 0 chr20 6170195 6170242 -65983640 + (T)n Simple_repeat Simple_repeat 1 47 0 395 186 39 20 chr20 6170891 6170993 -65982889 - L2 LINE L2 -1 3312 3209 1988 161 0 3 chr20 6171005 6171316 -65982566 - AluJb SINE Alu -2 310 1 2132 115 3 7 chr20 6171346 6171641 -65982241 + AluSx SINE Alu 1 294 -18 2254 112 0 10 chr20 6172082 6172396 -65981486 - AluJb SINE Alu -1 311 1 2005 125 33 10 chr20 6172789 6173093 -65980789 - AluJb SINE Alu -1 311 1 702 225 30 6 chr20 6173316 6173485 -65980397 - MER5B DNA MER1_type -5 173 1 197 274 245 29 chr20 6173493 6173595 -65980287 - MER5A DNA MER1_type 0 189 66 806 223 96 5 chr20 6173610 6173807 -65980075 + MER58C DNA MER1_type 1 215 0 2080 164 0 0 chr20 6173941 6174251 -65979631 + AluSx SINE Alu 3 312 0 27 62 0 0 chr20 6174323 6174371 -65979511 + AT_rich Low_complexity Low_complexity 1 48 0 347 322 27 34 chr20 6174648 6174797 -65979085 - MIR3 SINE MIR -43 165 18 975 244 22 32 chr20 6174899 6174928 -65978954 - L1MEc LINE L1 -5414 982 954 1979 137 10 7 chr20 6174928 6175235 -65978647 + AluJb SINE Alu 1 308 -4 975 244 22 32 chr20 6175235 6175521 -65978361 - L1MEc LINE L1 -5442 954 670 351 0 0 0 chr20 6175535 6175574 -65978308 + (TC)n Simple_repeat Simple_repeat 2 40 0 * 369 0 0 0 chr20 6175573 6175614 -65978268 + (TG)n Simple_repeat Simple_repeat 2 42 0 248 121 0 0 chr20 6175614 6175647 -65978235 - Alu SINE Alu -267 33 1 306 325 16 8 chr20 6175699 6175822 -65978060 - L1MEc LINE L1 -5775 621 498 2189 103 37 0 chr20 6176216 6176516 -65977366 - AluSx SINE Alu -1 311 1 2229 102 22 140 chr20 6176750 6177004 -65976878 - LTR45B LTR ERV1 -91 398 218 2137 131 3 0 chr20 6177004 6177302 -65976580 - AluSx SINE Alu -13 299 1 2229 102 22 140 chr20 6177302 6177497 -65976385 - LTR45B LTR ERV1 -271 218 2 1906 162 0 7 chr20 6177680 6177983 -65975899 + AluJo SINE Alu 1 301 -11 2147 100 19 26 chr20 6178075 6178386 -65975496 - AluSx SINE Alu -3 309 1 475 244 43 0 chr20 6178540 6178655 -65975227 - L2 LINE L2 -5 3267 3148 2215 88 3 11 chr20 6179368 6179676 -65974206 + AluSx SINE Alu 1 306 0 519 204 0 0 chr20 6179758 6179856 -65974026 - MLT1F LTR MaLR -59 508 411 743 283 57 32 chr20 6179911 6180190 -65973692 - MLT1F LTR MaLR -256 286 1 2203 107 0 3 chr20 6180316 6180606 -65973276 + AluSx SINE Alu 1 289 -23 24 0 0 0 chr20 6180606 6180630 -65973252 + AT_rich Low_complexity Low_complexity 1 24 0 201 152 0 0 chr20 6180665 6180698 -65973184 + (TG)n Simple_repeat Simple_repeat 2 34 0 1451 231 49 75 chr20 6180774 6181402 -65972480 + L2 LINE L2 1501 2112 -1202 630 171 120 8 chr20 6181444 6181561 -65972321 - AluSq/x SINE Alu -181 132 3 2309 115 3 0 chr20 6181576 6181888 -65971994 - AluSq SINE Alu 0 313 1 559 108 0 0 chr20 6181888 6181962 -65971920 + MER30 DNA MER1_type 126 199 -31 1231 280 119 8 chr20 6182000 6182708 -65971174 + L2 LINE L2 2522 3313 0 837 203 6 6 chr20 6183735 6183893 -65969989 + FRAM SINE Alu 1 158 -8 631 263 101 10 chr20 6184777 6184986 -65968896 + MIR SINE MIR 2 229 -33 595 240 101 35 chr20 6185174 6185607 -65968275 - LTR33 LTR ERVL 0 521 1 374 326 61 0 chr20 6186354 6186501 -65967381 + L2 LINE L2 3117 3272 0 1783 157 3 14 chr20 6187004 6187316 -65966566 - AluJo SINE Alu 0 309 1 1632 222 150 12 chr20 6188219 6188538 -65965344 + L1ME3A LINE L1 5583 5857 -313 2382 78 3 29 chr20 6188538 6188847 -65965035 + AluSp SINE Alu 1 301 -12 1632 222 150 12 chr20 6188847 6189026 -65964856 + L1ME3A LINE L1 5857 6150 -20 30 0 0 0 chr20 6189062 6189092 -65964790 + AT_rich Low_complexity Low_complexity 1 30 0 22 35 0 0 chr20 6189131 6189160 -65964722 + AT_rich Low_complexity Low_complexity 1 29 0 198 0 0 0 chr20 6189868 6189890 -65963992 + (TC)n Simple_repeat Simple_repeat 1 22 0 354 215 70 82 chr20 6189902 6190060 -65963822 - L1ME4a LINE L1 -24 6097 5942 1766 172 24 0 chr20 6190085 6190381 -65963501 - AluSx SINE Alu -9 303 1 841 181 0 0 chr20 6190615 6190742 -65963140 - FLAM_A SINE Alu -6 127 1 298 146 0 36 chr20 6190882 6190989 -65962893 + L1PA12 LINE L1 6113 6217 0 551 80 60 50 chr20 6191389 6191489 -65962393 - L1PA15 LINE L1 -1 6164 6064 528 140 0 0 chr20 6191756 6191863 -65962019 + (GA)n Simple_repeat Simple_repeat 2 108 0 192 158 0 0 chr20 6191912 6191950 -65961932 + GA-rich Low_complexity Low_complexity 2 39 0 2083 166 46 3 chr20 6192834 6193184 -65960698 - MLT1A1 LTR MaLR 0 365 1 402 277 134 5 chr20 6194605 6194807 -65959075 + L2 LINE L2 2842 3069 -244 692 254 61 4 chr20 6194861 6195089 -65958793 + HAL1 LINE L1 727 967 -1540 275 225 12 25 chr20 6195182 6195262 -65958620 + HAL1 LINE L1 1824 1902 -605 662 175 12 105 chr20 6195348 6195434 -65958448 - Tigger2 DNA MER2_type 0 2718 2654 2866 62 3 11 chr20 6195434 6195806 -65958076 - L1PA11 LINE L1 -1 6173 5805 662 175 12 105 chr20 6195806 6195890 -65957992 - Tigger2 DNA MER2_type -64 2654 2564 * 1406 120 10 0 chr20 6195889 6196097 -65957785 - Tigger2 DNA MER2_type -2508 210 1 836 251 75 61 chr20 6196101 6196591 -65957291 + HAL1 LINE L1 2011 2507 0 2134 110 0 58 chr20 6196619 6196946 -65956936 + AluSx SINE Alu 1 308 -4 571 145 8 8 chr20 6197572 6197689 -65956193 + (TAGA)n Simple_repeat Simple_repeat 4 120 0 515 170 18 45 chr20 6198302 6198414 -65955468 + MIR SINE MIR 31 139 -123 350 314 50 6 chr20 6198809 6198968 -65954914 + LTR67 LTR ERVL 384 549 -8 269 203 29 14 chr20 6198975 6199044 -65954838 + MIR SINE MIR 157 226 -36 231 36 0 0 chr20 6199142 6199170 -65954712 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 181 306 0 32 chr20 6199228 6199290 -65954592 + MER5B DNA MER1_type 17 76 -102 297 0 0 0 chr20 6199311 6199344 -65954538 + (TG)n Simple_repeat Simple_repeat 1 33 0 596 187 0 41 chr20 6199369 6199492 -65954390 - L1ME3 LINE L1 0 6162 6045 2224 80 25 0 chr20 6200236 6200511 -65953371 - AluY SINE Alu -29 282 1 232 190 0 52 chr20 6200511 6200569 -65953313 + AluSg/x SINE Alu 110 164 -138 765 152 8 0 chr20 6200583 6200708 -65953174 + L1PB4 LINE L1 6031 6156 0 2326 91 10 0 chr20 6200711 6201007 -65952875 + AluSg SINE Alu 1 299 -11 954 183 0 0 chr20 6201007 6201160 -65952722 + AluJo/FRAM SINE Alu 134 286 -26 1075 233 24 51 chr20 6201270 6201562 -65952320 + MLT1B LTR MaLR 107 390 0 1026 133 0 0 chr20 6202051 6202201 -65951681 + AluSp/q SINE Alu 157 306 -7 1244 163 124 35 chr20 6202343 6202455 -65951427 + AluSq SINE Alu 1 102 -211 279 0 0 0 chr20 6202455 6202486 -65951396 + (TC)n Simple_repeat Simple_repeat 2 32 0 1244 163 124 35 chr20 6202486 6202655 -65951227 + AluSq SINE Alu 102 307 -6 841 190 8 99 chr20 6202602 6202844 -65951038 + AluJo SINE Alu 88 307 -5 2166 125 0 19 chr20 6203070 6203383 -65950499 - AluSx SINE Alu -3 309 3 1717 175 0 20 chr20 6203387 6203690 -65950192 - AluJb SINE Alu -15 297 1 2121 79 0 4 chr20 6204281 6204558 -65949324 + AluSc SINE Alu 1 276 -33 2356 57 0 7 chr20 6205034 6205333 -65948549 - AluY SINE Alu -14 297 1 295 222 11 67 chr20 6205690 6205780 -65948102 - MLT1H LTR MaLR -60 489 405 758 250 10 47 chr20 6205783 6205975 -65947907 + MLT1E2 LTR MaLR 2 186 -440 522 181 0 0 chr20 6205979 6206062 -65947820 + FLAM_C SINE Alu 36 118 -25 949 211 64 18 chr20 6206063 6206281 -65947601 + MLT1E2 LTR MaLR 232 459 -167 1554 178 87 0 chr20 6206283 6206684 -65947198 - L1M3 LINE L1 -736 5447 5025 265 321 28 0 chr20 6206767 6206876 -65947006 + MLT1H LTR MaLR 33 144 -405 * 893 276 64 24 chr20 6206875 6207168 -65946714 + MLT1H LTR MaLR 20 403 -146 1068 234 103 0 chr20 6207279 6207561 -65946321 - L2 LINE L2 -661 2653 2343 302 79 0 0 chr20 6208206 6208244 -65945638 - Alu SINE Alu -10 290 253 574 190 0 0 chr20 6208244 6208344 -65945538 + AluSg/x SINE Alu 206 305 -7 2475 58 0 3 chr20 6208959 6209268 -65944614 + AluY SINE Alu 2 309 -2 180 0 0 0 chr20 6209608 6209628 -65944254 + (TGG)n Simple_repeat Simple_repeat 1 20 0 1983 119 14 0 chr20 6209628 6209913 -65943969 - AluSx SINE Alu -23 289 1 2387 61 0 3 chr20 6210016 6210313 -65943569 - AluY SINE Alu -15 296 1 2085 103 3 7 chr20 6210349 6210666 -65943216 + AluSp SINE Alu 1 313 0 1708 150 58 69 chr20 6210673 6211052 -65942830 - THE1C LTR MaLR 0 375 1 2165 64 0 3 chr20 6211059 6211470 -65942412 - AluY SINE Alu 0 410 1 383 227 47 16 chr20 6211521 6211649 -65942233 + L1ME4a LINE L1 5969 6100 -21 1618 176 17 10 chr20 6211866 6212168 -65941714 - AluJo SINE Alu -8 304 1 513 265 78 86 chr20 6212216 6212783 -65941099 + L1ME LINE L1 5256 5817 -345 627 289 0 60 chr20 6212854 6213022 -65940860 + MIR SINE MIR 44 198 -64 1776 166 3 13 chr20 6213022 6213329 -65940553 - AluJb SINE Alu -8 304 1 627 289 0 60 chr20 6213329 6213378 -65940504 + MIR SINE MIR 198 248 -14 276 149 0 0 chr20 6213662 6213709 -65940173 + (CA)n Simple_repeat Simple_repeat 1 47 0 1203 187 26 37 chr20 6214102 6214370 -65939512 - AluJo SINE Alu -47 265 1 22 0 0 0 chr20 6214535 6214557 -65939325 + AT_rich Low_complexity Low_complexity 1 22 0 2059 124 0 3 chr20 6214557 6214856 -65939026 + AluSx SINE Alu 1 298 -14 27 29 0 0 chr20 6214958 6214992 -65938890 + AT_rich Low_complexity Low_complexity 1 34 0 2043 119 0 0 chr20 6214994 6215287 -65938595 + AluSx SINE Alu 1 293 -19 837 144 0 43 chr20 6215442 6215581 -65938301 - FLAM_C SINE Alu 0 133 1 738 269 82 32 chr20 6215621 6216053 -65937829 - LTR33 LTR ERVL 0 521 29 2066 123 3 0 chr20 6216142 6216442 -65937440 - AluSq SINE Alu -12 301 1 485 285 29 38 chr20 6216476 6216586 -65937296 - L1MC/D LINE L1 -551 5613 5632 1920 145 0 25 chr20 6216586 6216904 -65936978 + AluSx SINE Alu 1 310 -2 485 285 29 38 chr20 6216904 6217126 -65936756 - L1MC/D LINE L1 -531 5633 5410 2129 152 16 45 chr20 6217787 6218007 -65935875 - MLT1A1 LTR MaLR 0 365 159 2404 85 0 0 chr20 6218007 6218314 -65935568 - AluSp SINE Alu -6 307 1 2129 152 16 45 chr20 6218314 6218469 -65935413 - MLT1A1 LTR MaLR -206 159 1 2207 102 0 16 chr20 6219020 6219335 -65934547 - AluSx SINE Alu -2 310 1 1965 136 0 10 chr20 6219335 6219643 -65934239 - AluSx SINE Alu -7 305 1 23 0 0 0 chr20 6219652 6219675 -65934207 + AT_rich Low_complexity Low_complexity 1 23 0 1764 148 44 7 chr20 6219933 6220231 -65933651 - AluJb SINE Alu 0 312 4 218 362 109 7 chr20 6220307 6220445 -65933437 - L2 LINE L2 -5 3267 3116 703 293 93 42 chr20 6220500 6220909 -65932973 - MLT1H LTR MaLR -5 590 30 339 136 0 0 chr20 6221041 6221100 -65932782 + (TCCC)n Simple_repeat Simple_repeat 1 59 0 1445 115 18 142 chr20 6221101 6221275 -65932607 - AluJo SINE Alu -23 289 174 1554 181 32 3 chr20 6221275 6221557 -65932325 + AluJb SINE Alu 3 292 -20 1445 115 18 142 chr20 6221557 6221712 -65932170 - AluJo SINE Alu -138 174 1 2050 122 0 3 chr20 6221906 6222210 -65931672 + AluSx SINE Alu 1 303 -9 2117 39 0 12 chr20 6222340 6222598 -65931284 - AluY SINE Alu -16 295 41 812 127 8 45 chr20 6222877 6223011 -65930871 - FLAM_C SINE Alu -4 129 1 414 57 0 0 chr20 6223114 6223167 -65930715 + (TATG)n Simple_repeat Simple_repeat 2 54 0 682 211 53 132 chr20 6223227 6223389 -65930493 - MLT1I LTR MaLR -98 311 183 1840 131 6 35 chr20 6223389 6223701 -65930181 + AluSx SINE Alu 1 303 -9 682 211 53 132 chr20 6223701 6223842 -65930040 - MLT1I LTR MaLR -226 183 32 564 243 79 79 chr20 6224033 6224192 -65929690 + MIR SINE MIR 44 202 -60 852 139 106 101 chr20 6224192 6224308 -65929574 + MER3 DNA MER1_type 1 120 -89 1890 94 0 8 chr20 6224308 6224575 -65929307 - AluSx SINE Alu -45 267 3 852 139 106 101 chr20 6224575 6224666 -65929216 + MER3 DNA MER1_type 120 209 0 564 243 79 79 chr20 6224666 6224678 -65929204 + MIR SINE MIR 202 213 -49 1567 202 10 0 chr20 6224678 6224975 -65928907 + AluJb SINE Alu 1 300 -12 564 243 79 79 chr20 6224975 6225016 -65928866 + MIR SINE MIR 212 257 -5 1473 184 112 90 chr20 6225440 6225717 -65928165 - MLT1C LTR MaLR 0 467 175 2165 111 0 10 chr20 6225717 6226024 -65927858 - AluJb SINE Alu -8 304 1 1473 184 112 90 chr20 6226024 6226203 -65927679 - MLT1C LTR MaLR -292 175 1 293 125 42 0 chr20 6226513 6226561 -65927321 + MLT1K LTR MaLR 539 588 0 753 235 45 71 chr20 6226854 6227263 -65926619 + LTR16C LTR ERVL 100 456 -1 364 217 43 52 chr20 6227498 6227566 -65926316 - L1ME4a LINE L1 0 6121 6053 1993 123 7 3 chr20 6227566 6227866 -65926016 + AluSx SINE Alu 1 301 -11 364 217 43 52 chr20 6227866 6227912 -65925970 - L1ME4a LINE L1 -68 6053 6008 1619 145 14 37 chr20 6228512 6228808 -65925074 + AluJb SINE Alu 1 289 -23 1910 204 78 43 chr20 6228816 6229305 -65924577 + MLT1E2 LTR MaLR 114 619 -7 1256 270 62 47 chr20 6229444 6229577 -65924305 - LTR16C LTR ERVL -8 483 353 2057 101 7 7 chr20 6229577 6229873 -65924009 + AluSq SINE Alu 7 302 -11 1870 140 0 23 chr20 6229881 6230189 -65923693 + AluJb SINE Alu 1 301 -11 1256 270 62 47 chr20 6230189 6230517 -65923365 - LTR16C LTR ERVL -144 347 6 574 288 66 26 chr20 6230620 6230786 -65923096 + MIR SINE MIR 13 193 -69 2027 108 0 11 chr20 6230786 6231130 -65922752 - AluSx SINE Alu 0 341 1 574 288 66 26 chr20 6231130 6231188 -65922694 + MIR SINE MIR 193 247 -15 1403 154 32 43 chr20 6231374 6231654 -65922228 + AluJo SINE Alu 15 291 -21 1305 93 6 0 chr20 6231689 6231861 -65922021 + AluSp SINE Alu 85 257 -56 920 228 52 40 chr20 6231962 6232234 -65921648 + Charlie4 DNA MER1_type 18 292 -1669 1725 131 0 72 chr20 6232240 6232572 -65921310 - AluSx SINE Alu 0 310 1 233 266 225 40 chr20 6232689 6232862 -65921020 - MLT1K LTR MaLR -282 306 102 1971 203 43 51 chr20 6232865 6233372 -65920510 - MLT1D LTR MaLR -2 503 1 350 171 0 13 chr20 6233787 6233863 -65920019 + CT-rich Low_complexity Low_complexity 4 78 0 1911 126 4 0 chr20 6233863 6234141 -65919741 - AluSx SINE Alu -33 279 1 444 290 0 0 chr20 6234225 6234349 -65919533 + LTR16C LTR ERVL 357 480 -11 2046 139 0 0 chr20 6234901 6235203 -65918679 + AluSx SINE Alu 1 302 -10 2130 106 0 10 chr20 6235598 6235901 -65917981 + AluSq SINE Alu 1 300 -13 2287 101 0 0 chr20 6236111 6236418 -65917464 + AluSc SINE Alu 3 309 0 1321 226 36 7 chr20 6236533 6236834 -65917048 - AluJb SINE Alu -2 310 1 210 143 0 0 chr20 6236837 6236872 -65917010 + (T)n Simple_repeat Simple_repeat 1 35 0 553 258 168 0 chr20 6236992 6237159 -65916723 - MIR SINE MIR 0 262 68 1797 145 3 11 chr20 6237358 6237641 -65916241 + AluJb SINE Alu 11 291 -21 333 68 0 0 chr20 6237668 6237712 -65916170 + (TTTC)n Simple_repeat Simple_repeat 1 44 0 1969 152 0 3 chr20 6237715 6238025 -65915857 - AluSx SINE Alu -3 309 1 1888 132 3 3 chr20 6238196 6238483 -65915399 - AluJb SINE Alu -25 287 1 2199 105 0 0 chr20 6238498 6238792 -65915090 + AluSg SINE Alu 1 294 -16 1489 109 18 4 chr20 6239096 6239325 -65914557 - AluSg/x SINE Alu -2 310 79 11319 28 3 25 chr20 6239712 6241119 -65912763 + SVA Other Other 5 1380 -6 943 167 194 53 chr20 6241206 6241305 -65912577 + AluSg SINE Alu 1 85 -215 2049 110 3 0 chr20 6241305 6241597 -65912285 - AluSp SINE Alu -4 309 17 943 167 194 53 chr20 6241597 6241760 -65912122 + AluSg SINE Alu 85 300 0 1601 187 10 7 chr20 6242633 6242938 -65910944 - AluJo SINE Alu -6 306 1 2358 147 121 28 chr20 6243017 6243085 -65910797 - MLT1D LTR MaLR 0 505 445 2014 108 3 11 chr20 6243085 6243363 -65910519 + AluSc SINE Alu 1 278 -31 327 25 0 0 chr20 6243363 6243403 -65910479 + (CA)n Simple_repeat Simple_repeat 1 40 0 2358 147 121 28 chr20 6243411 6243804 -65910078 - MLT1D LTR MaLR -60 445 1 1883 147 19 3 chr20 6243828 6244135 -65909747 + AluJb SINE Alu 1 312 0 781 296 71 24 chr20 6244259 6244512 -65909370 + LTR16C LTR ERVL 42 306 -185 857 122 0 8 chr20 6244513 6244644 -65909238 + FLAM_C SINE Alu 1 130 -13 738 240 6 34 chr20 6244675 6244854 -65909028 + LTR16C LTR ERVL 313 486 -5 327 285 50 13 chr20 6244860 6244969 -65908913 - MIR SINE MIR -102 106 8 2229 96 0 3 chr20 6245572 6245884 -65907998 - AluSq SINE Alu -2 311 1 1482 134 22 109 chr20 6245993 6246314 -65907568 - AluJb SINE Alu -11 301 9 604 163 0 0 chr20 6246319 6246411 -65907471 - AluJo SINE Alu -20 292 201 * 789 146 7 35 chr20 6246407 6246551 -65907331 - AluJo SINE Alu -170 142 3 1754 158 0 26 chr20 6247211 6247514 -65906368 - AluJo SINE Alu -13 299 5 2099 110 3 0 chr20 6247533 6247832 -65906050 - AluSx SINE Alu -10 302 3 1451 189 0 25 chr20 6248343 6248673 -65905209 + AluJo SINE Alu 9 331 0 691 182 0 0 chr20 6248687 6248797 -65905085 + FLAM_C SINE Alu 2 111 -32 453 19 0 0 chr20 6248804 6248858 -65905024 + (TAA)n Simple_repeat Simple_repeat 1 54 0 845 111 0 32 chr20 6249841 6249967 -65903915 + FLAM_C SINE Alu 2 123 -10 800 76 0 0 chr20 6249971 6250076 -65903806 + AluY SINE Alu 194 298 -13 2176 95 0 0 chr20 6250082 6250367 -65903515 + AluSg SINE Alu 1 285 -25 288 77 0 0 chr20 6250367 6250406 -65903476 + (CATA)n Simple_repeat Simple_repeat 2 40 0 1857 160 0 0 chr20 6250522 6250822 -65903060 - AluSx SINE Alu -12 300 1 643 291 62 55 chr20 6250850 6251573 -65902309 - L1MEd LINE L1 -4579 1731 971 934 219 109 29 chr20 6251573 6251847 -65902035 + MLT1A2 LTR MaLR 1 296 -78 1565 164 20 40 chr20 6251907 6252211 -65901671 + AluSx SINE Alu 1 298 -14 1730 165 13 3 chr20 6252259 6252609 -65901273 - AluJb SINE Alu 0 353 1 318 271 121 7 chr20 6253341 6253481 -65900401 + L1ME LINE L1 5425 5580 -586 988 205 20 94 chr20 6253767 6254065 -65899817 - MLT1A2 LTR MaLR 0 374 99 1883 106 93 130 chr20 6254068 6254530 -65899352 - Tigger2 DNA MER2_type -3 2715 2271 374 194 0 0 chr20 6254514 6254586 -65899296 - Tigger2 DNA MER2_type -2646 72 1 * 530 268 121 17 chr20 6254695 6254926 -65898956 + LTR16C LTR ERVL 223 477 -14 1968 164 22 43 chr20 6254983 6255128 -65898754 + MLT1A1 LTR MaLR 1 148 -217 1942 154 3 13 chr20 6255128 6255434 -65898448 - AluJb SINE Alu -9 303 1 1968 164 22 43 chr20 6255434 6255659 -65898223 + MLT1A1 LTR MaLR 148 363 -2 2632 65 0 0 chr20 6256067 6256373 -65897509 - AluY SINE Alu -5 306 1 1808 172 30 3 chr20 6256389 6256691 -65897191 - AluSx SINE Alu -2 310 1 1600 130 41 30 chr20 6256889 6257158 -65896724 - AluJb SINE Alu -39 273 2 344 61 0 0 chr20 6257158 6257207 -65896675 + AluSp/q SINE Alu 248 296 -7 1212 292 76 4 chr20 6257861 6258334 -65895548 - LTR33 LTR ERVL -14 507 1 363 127 0 0 chr20 6258598 6258653 -65895229 - MER20 DNA MER1_type -2 217 163 473 282 56 52 chr20 6258708 6258921 -65894961 - MLT1H LTR MaLR -262 287 74 2311 106 3 0 chr20 6259579 6259882 -65894000 + AluSc SINE Alu 1 304 -5 1040 128 37 136 chr20 6259882 6260118 -65893764 - AluJb SINE Alu -23 289 76 2045 109 26 22 chr20 6260127 6260438 -65893444 + AluSx SINE Alu 1 312 0 295 195 0 98 chr20 6260465 6260547 -65893335 - AluJb SINE Alu -223 79 6 923 215 36 10 chr20 6260574 6260769 -65893113 + MIR SINE MIR 12 211 -51 1866 154 0 17 chr20 6260769 6261061 -65892821 + AluJb SINE Alu 1 287 -25 2247 117 0 0 chr20 6261136 6261435 -65892447 - AluSx SINE Alu -13 299 1 29 59 0 15 chr20 6261878 6261916 -65891966 + AT_rich Low_complexity Low_complexity 1 39 -28 2461 84 0 3 chr20 6261916 6262224 -65891658 + AluSg1 SINE Alu 1 307 -2 29 59 0 15 chr20 6262224 6262253 -65891629 + AT_rich Low_complexity Low_complexity 39 67 0 1940 144 7 7 chr20 6262332 6262623 -65891259 + AluJb SINE Alu 13 303 -9 2366 113 0 0 chr20 6262706 6263008 -65890874 - AluSg SINE Alu -8 302 1 2343 127 0 0 chr20 6263667 6263975 -65889907 + AluSx SINE Alu 1 308 -4 22 0 0 0 chr20 6264058 6264080 -65889802 + AT_rich Low_complexity Low_complexity 1 22 0 1946 162 7 7 chr20 6264092 6264400 -65889482 + AluJb SINE Alu 1 308 -4 692 213 24 0 chr20 6264419 6264546 -65889336 + FLAM_A SINE Alu 1 130 -3 2361 97 0 7 chr20 6264546 6264846 -65889036 - AluSq SINE Alu -15 298 1 2429 87 0 22 chr20 6264950 6265261 -65888621 + AluSc SINE Alu 1 304 -5 1243 245 122 57 chr20 6265296 6265855 -65888027 - MLT1G1 LTR MaLR 0 595 1 1262 186 21 0 chr20 6266598 6266835 -65887047 + MLT1D LTR MaLR 1 242 -263 223 164 33 0 chr20 6266846 6266907 -65886975 + GA-rich Low_complexity Low_complexity 2 64 0 21 36 0 0 chr20 6266975 6267003 -65886879 + AT_rich Low_complexity Low_complexity 1 28 0 1990 74 82 0 chr20 6267004 6267260 -65886622 - AluSp SINE Alu -14 299 23 401 109 0 0 chr20 6267260 6267315 -65886567 - Alu SINE Alu -254 56 2 1905 143 20 3 chr20 6267315 6267608 -65886274 - AluJo SINE Alu -14 298 1 480 128 20 4 chr20 6267608 6267759 -65886123 + MLT1D LTR MaLR 295 505 0 1976 138 7 10 chr20 6268115 6268405 -65885477 - AluJb SINE Alu -22 290 2 1493 170 9 88 chr20 6268418 6268736 -65885146 - AluJb SINE Alu -19 293 1 324 162 59 0 chr20 6269087 6269155 -65884727 + LTR16C LTR ERVL 420 491 0 2105 119 13 44 chr20 6269275 6269593 -65884289 - AluSx SINE Alu -4 308 1 192 111 0 0 chr20 6269754 6269790 -65884092 + (CAGA)n Simple_repeat Simple_repeat 2 37 0 255 294 261 0 chr20 6271166 6271285 -65882597 - L2 LINE L2 0 3313 3164 1385 132 38 9 chr20 6271296 6271509 -65882373 + MER20 DNA MER1_type 1 219 0 1186 186 0 0 chr20 6271517 6271705 -65882177 + MER5A DNA MER1_type 1 188 -1 333 223 48 117 chr20 6271790 6271842 -65882040 + MER5A DNA MER1_type 25 68 -121 2524 77 0 0 chr20 6271842 6272153 -65881729 + AluY SINE Alu 1 311 0 333 223 48 117 chr20 6272153 6272203 -65881679 + MER5A DNA MER1_type 68 120 -69 2278 118 7 0 chr20 6272264 6272570 -65881312 + AluSx SINE Alu 1 308 -4 1061 263 84 46 chr20 6273010 6273425 -65880457 + MLT1J LTR MaLR 73 503 -8 2240 131 0 6 chr20 6273853 6274150 -65879732 + AluSx SINE Alu 1 297 -15 390 42 0 0 chr20 6274150 6274198 -65879684 + (CA)n Simple_repeat Simple_repeat 1 48 0 2240 131 0 6 chr20 6274198 6274212 -65879670 + AluSx SINE Alu 297 310 -2 374 204 11 0 chr20 6274397 6274485 -65879397 + GA-rich Low_complexity Low_complexity 3 91 0 2232 133 0 0 chr20 6274973 6275274 -65878608 + AluSx SINE Alu 1 301 -11 1391 156 60 96 chr20 6275284 6275586 -65878296 + AluJb SINE Alu 6 296 -16 517 128 13 0 chr20 6276027 6276105 -65877777 + AluS SINE Alu 221 299 -13 2107 126 7 7 chr20 6276832 6277133 -65876749 - AluSx SINE Alu -11 301 1 2225 121 0 16 chr20 6277451 6277764 -65876118 - AluSx SINE Alu -4 308 1 2366 90 0 0 chr20 6278297 6278597 -65875285 - AluY SINE Alu -11 300 1 403 226 65 40 chr20 6278630 6278754 -65875128 + MIR SINE MIR 61 187 -75 212 275 92 37 chr20 6278761 6278870 -65875012 + MIR SINE MIR 148 262 0 1775 161 18 0 chr20 6278946 6279219 -65874663 + AluJb SINE Alu 1 278 -34 189 0 0 0 chr20 6279223 6279244 -65874638 + (CAA)n Simple_repeat Simple_repeat 1 21 0 1939 138 7 26 chr20 6279246 6279551 -65874331 + AluSx SINE Alu 1 299 -13 1648 180 24 24 chr20 6279962 6280256 -65873626 + AluJo SINE Alu 1 294 -18 4925 146 24 53 chr20 6280360 6280691 -65873191 - L1MA8 LINE L1 -4 6287 5948 2277 125 0 0 chr20 6280691 6280995 -65872887 - AluSx SINE Alu -8 304 1 4925 146 24 53 chr20 6280995 6281231 -65872651 - L1MA8 LINE L1 -343 5948 5707 2256 135 0 0 chr20 6281231 6281542 -65872340 - AluSx SINE Alu -1 311 1 4925 146 24 53 chr20 6281542 6281799 -65872083 - L1MA8 LINE L1 -584 5707 5495 2359 98 0 13 chr20 6281799 6282114 -65871768 - AluSq SINE Alu -2 311 1 4925 146 24 53 chr20 6282114 6282319 -65871563 - L1MA8 LINE L1 -796 5495 5286 21 0 0 0 chr20 6282763 6282784 -65871098 + GC_rich Low_complexity Low_complexity 1 21 0 329 278 56 56 chr20 6283111 6283255 -65870627 + HAL1 LINE L1 2363 2506 -1 279 321 128 14 chr20 6283552 6283848 -65870034 + LTR16B LTR ERVL 124 453 -11 203 313 83 90 chr20 6285724 6286012 -65867870 - L2 LINE L2 -30 3242 2957 2214 110 0 3 chr20 6286359 6286651 -65867231 - AluSg SINE Alu -14 296 6 32 0 0 0 chr20 6287171 6287203 -65866679 + AT_rich Low_complexity Low_complexity 1 32 0 1268 322 58 7 chr20 6287248 6288093 -65865789 - HERVL40 LTR ERVL -431 5333 4417 2842 314 42 14 chr20 6288111 6289054 -65864828 - HERVL40 LTR ERVL -1947 3707 2703 2485 100 3 0 chr20 6289054 6289365 -65864517 - AluSp SINE Alu -1 312 1 2842 314 42 14 chr20 6289365 6289825 -65864057 - HERVL40 LTR ERVL -2951 2703 2258 2097 201 91 20 chr20 6289840 6289990 -65863892 - REP3 LTR ERV -30 532 394 447 19 0 0 chr20 6289990 6290042 -65863840 + (CA)n Simple_repeat Simple_repeat 2 53 0 2097 201 91 20 chr20 6290042 6290388 -65863494 - REP3 LTR ERV -168 394 1 409 333 0 0 chr20 6290604 6290730 -65863152 - MER89-int LTR ERV1 -406 6395 6270 379 342 54 43 chr20 6291811 6292256 -65861626 - HERVL40 LTR ERVL -2307 3223 2774 290 233 0 0 chr20 6293038 6293098 -65860784 + MER77 LTR ERV1 9 68 -537 52 0 0 0 chr20 6293266 6293318 -65860564 + AT_rich Low_complexity Low_complexity 1 52 0 1191 167 5 10 chr20 6294176 6294415 -65859467 - AluJb SINE Alu 0 330 93 614 192 0 0 chr20 6294481 6294580 -65859302 - AluJb SINE Alu -213 99 1 202 298 138 11 chr20 6294738 6294832 -65859050 + L2 LINE L2 3137 3242 -30 599 175 15 216 chr20 6294877 6295146 -65858736 - MER51A LTR ERV1 0 640 426 295 298 144 33 chr20 6296410 6296709 -65857173 - LTR16B LTR ERVL -9 455 124 180 211 56 100 chr20 6297998 6298088 -65855794 + MIR SINE MIR 63 148 -114 292 299 28 19 chr20 6299314 6299421 -65854461 - MIR SINE MIR -121 141 34 185 281 16 94 chr20 6301619 6301747 -65852135 + L2 LINE L2 1107 1224 -2090 470 197 171 63 chr20 6301773 6301850 -65852032 + ORSL DNA AcHobo 2 69 -206 2249 110 7 0 chr20 6301850 6302158 -65851724 + AluY SINE Alu 2 311 0 470 197 171 63 chr20 6302158 6302214 -65851668 + ORSL DNA AcHobo 69 118 -157 2287 56 42 7 chr20 6302214 6302499 -65851383 + AluY SINE Alu 1 295 -16 470 197 171 63 chr20 6302499 6302603 -65851279 + ORSL DNA AcHobo 118 266 -9 694 153 0 30 chr20 6303768 6303829 -65850053 - L1MB7 LINE L1 -10 6174 6113 1926 120 0 57 chr20 6303829 6304155 -65849727 + AluSx SINE Alu 1 309 0 694 153 0 30 chr20 6304155 6304223 -65849659 - L1MB7 LINE L1 -71 6113 6048 452 167 0 13 chr20 6304231 6304309 -65849573 - FLAM SINE Alu -23 120 44 2477 179 42 40 chr20 6304386 6304624 -65849258 - L1MB7 LINE L1 -366 5818 5582 1720 171 54 7 chr20 6304624 6304805 -65849077 - AluJb SINE Alu 0 312 110 321 47 0 0 chr20 6304805 6304848 -65849034 + (TTTG)n Simple_repeat Simple_repeat 4 46 0 1720 171 54 7 chr20 6304848 6304964 -65848918 - AluJb SINE Alu -202 110 1 2477 179 42 40 chr20 6304964 6305419 -65848463 - L1MB7 LINE L1 -602 5582 5129 1884 136 3 39 chr20 6305419 6305727 -65848155 - AluJo SINE Alu -15 297 1 2477 179 42 40 chr20 6305727 6305761 -65848121 - L1MB7 LINE L1 -1055 5129 5097 2392 74 24 0 chr20 6305761 6306057 -65847825 + AluSp SINE Alu 1 303 -10 2477 179 42 40 chr20 6306057 6306184 -65847698 - L1MB7 LINE L1 -1087 5097 4967 871 169 0 0 chr20 6306184 6306326 -65847556 + AluJb SINE Alu 160 301 -11 1657 150 15 4 chr20 6306326 6306586 -65847296 + AluSx SINE Alu 1 263 -49 22 35 0 0 chr20 6306599 6306628 -65847254 + AT_rich Low_complexity Low_complexity 1 29 0 197 262 0 0 chr20 6307559 6307601 -65846281 + L2 LINE L2 3137 3178 -94 2408 100 7 0 chr20 6307604 6307914 -65845968 + AluSq SINE Alu 1 312 -1 251 83 0 21 chr20 6307924 6307972 -65845910 + (CAAG)n Simple_repeat Simple_repeat 2 48 0 876 140 0 22 chr20 6309719 6309855 -65844027 + AluJo/FLAM SINE Alu 1 133 -169 2282 99 3 0 chr20 6309858 6310150 -65843732 + AluSp SINE Alu 1 293 -20 526 182 141 35 chr20 6310323 6310521 -65843361 - LTR16B LTR ERVL 0 464 246 231 221 90 97 chr20 6310952 6311097 -65842785 - HAL1 LINE L1 -1 2506 2363 21 36 0 0 chr20 6312008 6312036 -65841846 + AT_rich Low_complexity Low_complexity 1 28 0 2269 113 3 0 chr20 6312249 6312560 -65841322 - AluSx SINE Alu 0 312 1 2088 128 0 13 chr20 6312569 6312873 -65841009 - AluSx SINE Alu -12 300 1 4388 52 0 0 chr20 6313530 6314065 -65839817 + L1PA5 LINE L1 3567 4101 -2045 * 8082 36 0 0 chr20 6314054 6315015 -65838867 - L1PA4 LINE L1 -892 5254 4294 7472 37 6 0 chr20 6315015 6315899 -65837983 + L1PA4 LINE L1 5257 6154 -1 30 0 0 0 chr20 6315899 6315929 -65837953 + AT_rich Low_complexity Low_complexity 1 30 0 11008 40 3 0 chr20 6315929 6318001 -65835881 + L1PA5 LINE L1 4080 6152 -2 2067 136 0 0 chr20 6318199 6318510 -65835372 + AluSp SINE Alu 4 314 0 14988 123 21 19 chr20 6318510 6319466 -65834416 + MER50-int LTR ERV1 4932 5885 -1320 2146 106 0 7 chr20 6319466 6319770 -65834112 + AluSp SINE Alu 1 302 0 14988 123 21 19 chr20 6319770 6321074 -65832808 + MER50-int LTR ERV1 5885 7197 -8 4407 137 27 16 chr20 6321074 6321777 -65832105 + MER50 LTR ERV1 1 711 -23 663 230 149 30 chr20 6321891 6322190 -65831692 + L1ME LINE L1 5485 5809 -353 1737 174 0 39 chr20 6322514 6322687 -65831195 - AluJb SINE Alu -14 298 141 2366 103 0 3 chr20 6322687 6322988 -65830894 - AluSg SINE Alu -10 300 1 1737 174 0 39 chr20 6322988 6323124 -65830758 - AluJb SINE Alu -171 141 1 1415 161 124 18 chr20 6323127 6323400 -65830482 - AluJo SINE Alu -10 302 1 22 0 0 0 chr20 6323401 6323423 -65830459 + AT_rich Low_complexity Low_complexity 1 22 0 1192 146 92 5 chr20 6323684 6323890 -65829992 + AluJb SINE Alu 87 310 -2 561 68 0 0 chr20 6323892 6323966 -65829916 + (GGAA)n Simple_repeat Simple_repeat 3 76 0 499 218 10 0 chr20 6324168 6324269 -65829613 + FLAM_A SINE Alu 23 124 -18 2334 89 27 0 chr20 6324270 6324563 -65829319 + AluSx SINE Alu 1 301 -11 2240 79 18 0 chr20 6324591 6324910 -65828972 + AluSp SINE Alu 1 324 0 880 246 18 7 chr20 6325721 6326001 -65827881 + L1MC/D LINE L1 2805 3087 -3059 761 150 0 88 chr20 6326011 6326158 -65827724 + FLAM_C SINE Alu 10 143 0 1678 240 48 50 chr20 6326158 6326757 -65827125 + L1MC/D LINE L1 3091 3688 -2458 2184 105 3 16 chr20 6326757 6327061 -65826821 + AluSx SINE Alu 1 300 -12 1739 158 37 10 chr20 6327071 6327369 -65826513 + AluJo SINE Alu 1 306 -6 754 199 18 12 chr20 6327370 6327536 -65826346 + L1MC/D LINE L1 5599 5765 -477 225 0 0 0 chr20 6328278 6328303 -65825579 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 848 110 0 0 chr20 6328307 6328425 -65825457 - FLAM_C SINE Alu -15 118 1 241 307 52 13 chr20 6328589 6328742 -65825140 - MIR SINE MIR -39 223 65 2273 108 13 0 chr20 6329122 6329429 -65824453 - AluSp SINE Alu -2 311 1 1770 133 22 65 chr20 6329495 6329817 -65824065 - AluJo SINE Alu -4 308 1 814 147 0 0 chr20 6329855 6329971 -65823911 - AluJb SINE Alu -196 116 1 1043 296 181 21 chr20 6330157 6330975 -65822907 - L2 LINE L2 -1992 1322 374 972 182 42 0 chr20 6330982 6331174 -65822708 + Charlie5 DNA MER1_type 1 200 -2412 1875 126 3 87 chr20 6331186 6331319 -65822563 + AluJo SINE Alu 1 144 -168 1437 137 166 0 chr20 6331319 6331583 -65822299 + AluSg1 SINE Alu 1 304 0 1875 126 3 87 chr20 6331583 6331782 -65822100 + AluJo SINE Alu 144 306 -6 33 0 0 0 chr20 6332344 6332377 -65821505 + AT_rich Low_complexity Low_complexity 1 33 0 813 138 14 179 chr20 6332388 6332612 -65821270 + Charlie5 DNA MER1_type 2337 2502 -83 1495 186 4 4 chr20 6332612 6332859 -65821023 + AluJb SINE Alu 1 247 -65 813 138 14 179 chr20 6332859 6332931 -65820951 + Charlie5 DNA MER1_type 2502 2584 -1 591 268 71 20 chr20 6332935 6333189 -65820693 - L2 LINE L2 -2961 353 87 907 236 43 40 chr20 6333266 6333345 -65820537 - L2 LINE L2 -775 2539 2462 2489 88 0 0 chr20 6333345 6333653 -65820229 + AluSx SINE Alu 1 308 -4 907 236 43 40 chr20 6333653 6333921 -65819961 - L2 LINE L2 -852 2462 2191 523 183 77 0 chr20 6334665 6334769 -65819113 + FLAM_C SINE Alu 7 118 -25 36 40 0 0 chr20 6334769 6334819 -65819063 + AT_rich Low_complexity Low_complexity 1 50 0 347 284 20 10 chr20 6334884 6334986 -65818896 - MIR SINE MIR -63 145 43 192 125 0 0 chr20 6334991 6335023 -65818859 + (T)n Simple_repeat Simple_repeat 1 32 0 308 250 160 56 chr20 6335036 6335180 -65818702 - L1MC5 LINE L1 -48 7913 7755 270 205 13 93 chr20 6335232 6335383 -65818499 - L1MC5 LINE L1 -195 7766 7628 1184 110 29 131 chr20 6335398 6335643 -65818239 - AluYb8 SINE Alu -15 303 84 755 219 35 42 chr20 6335671 6335959 -65817923 - L1MC5 LINE L1 -366 7595 7310 349 293 23 38 chr20 6336098 6336291 -65817591 - L1MC4 LINE L1 -725 7236 7068 1722 181 13 10 chr20 6336291 6336595 -65817287 + AluJb SINE Alu 2 306 -6 265 187 27 13 chr20 6336600 6336675 -65817207 + GA-rich Low_complexity Low_complexity 3 78 0 642 227 50 69 chr20 6336676 6336993 -65816889 - L1MC5 LINE L1 -887 7074 6764 2202 106 0 26 chr20 6337119 6337421 -65816461 + AluSg SINE Alu 1 294 -16 1754 166 0 7 chr20 6337433 6337716 -65816166 + AluJb SINE Alu 1 281 -31 327 169 17 0 chr20 6338288 6338347 -65815535 + FRAM/FAM SINE Alu 1 59 -107 2952 180 98 52 chr20 6338513 6339208 -65814674 + LTR8A LTR ERV1 1 727 0 2034 128 51 0 chr20 6339473 6339769 -65814113 - AluSx SINE Alu -1 311 1 1886 207 111 47 chr20 6339770 6339905 -65813977 - L1MC/D LINE L1 -743 5403 5278 904 153 70 13 chr20 6339905 6340062 -65813820 - FRAM SINE Alu 0 166 1 1886 207 111 47 chr20 6340062 6340137 -65813745 - L1MC/D LINE L1 -868 5278 5209 1986 157 7 0 chr20 6340137 6340436 -65813446 - AluJb SINE Alu -11 301 1 1886 207 111 47 chr20 6340436 6340592 -65813290 - L1MC/D LINE L1 -937 5209 5064 1361 192 130 0 chr20 6340592 6340853 -65813029 - AluJo SINE Alu -7 295 1 1886 207 111 47 chr20 6340853 6340965 -65812917 - L1MC/D LINE L1 -1082 5064 4961 2324 99 24 0 chr20 6340965 6341259 -65812623 - AluSx SINE Alu -11 301 1 1886 207 111 47 chr20 6341259 6341529 -65812353 - L1MC/D LINE L1 -1185 4961 4642 1964 76 44 0 chr20 6341537 6341786 -65812096 - AluSq SINE Alu -53 260 1 34 42 0 0 chr20 6341871 6341919 -65811963 + AT_rich Low_complexity Low_complexity 1 48 0 434 238 20 79 chr20 6341976 6342178 -65811704 - L2 LINE L2 -893 2421 2232 219 238 25 50 chr20 6343457 6343537 -65810345 - L2 LINE L2 -68 3245 3168 226 333 49 0 chr20 6344249 6344330 -65809552 - L2 LINE L2 -50 3263 3179 25 31 0 0 chr20 6346371 6346403 -65807479 + AT_rich Low_complexity Low_complexity 1 32 0 552 284 47 43 chr20 6347531 6347763 -65806119 + HAL1 LINE L1 1 233 -2274 643 152 24 32 chr20 6348615 6348740 -65805142 + AluJb SINE Alu 182 305 -7 1687 239 144 55 chr20 6348743 6348879 -65805003 + HAL1 LINE L1 971 1094 -1413 1902 141 10 13 chr20 6348879 6349192 -65804690 + AluSx SINE Alu 1 312 0 1687 239 144 55 chr20 6349192 6349890 -65803992 + HAL1 LINE L1 1094 1879 -628 351 296 77 6 chr20 6350390 6350559 -65803323 + L1ME3A LINE L1 5690 5870 -300 236 94 0 0 chr20 6350608 6350640 -65803242 + Alu SINE Alu 181 212 -91 679 101 119 0 chr20 6350642 6350751 -65803131 + AluSg/x SINE Alu 177 298 -14 414 256 68 46 chr20 6350925 6351144 -65802738 + HAL1 LINE L1 2284 2507 0 27 0 0 0 chr20 6351610 6351637 -65802245 + AT_rich Low_complexity Low_complexity 1 27 0 31 26 0 0 chr20 6351941 6351979 -65801903 + AT_rich Low_complexity Low_complexity 1 38 0 310 133 0 0 chr20 6351992 6352037 -65801845 - Alu SINE Alu -258 45 1 13685 130 52 27 chr20 6352037 6352936 -65800946 + Tigger1 DNA MER2_type 35 910 -1508 2303 78 14 0 chr20 6352936 6353103 -65800779 - AluY SINE Alu -11 300 126 189 0 0 0 chr20 6353103 6353124 -65800758 + (TTA)n Simple_repeat Simple_repeat 2 22 0 2303 78 14 0 chr20 6353124 6353252 -65800630 - AluY SINE Alu -185 126 1 13685 130 52 27 chr20 6353252 6354227 -65799655 + Tigger1 DNA MER2_type 910 1859 -559 2134 123 10 3 chr20 6354227 6354535 -65799347 + AluSx SINE Alu 1 310 -2 1955 125 30 20 chr20 6354543 6354846 -65799036 + AluSq SINE Alu 1 306 -7 13685 130 52 27 chr20 6354846 6355186 -65798696 + Tigger1 DNA MER2_type 1865 2323 -95 2370 80 7 0 chr20 6355186 6355472 -65798410 - AluSg SINE Alu -22 288 1 13685 130 52 27 chr20 6355472 6355571 -65798311 + Tigger1 DNA MER2_type 2323 2418 0 416 223 92 159 chr20 6355700 6356014 -65797868 - L2 LINE L2 -4 3309 3017 1127 295 120 13 chr20 6356039 6356661 -65797221 - L2 LINE L2 -410 2904 2137 304 276 38 48 chr20 6356670 6356775 -65797107 - MER5B DNA MER1_type -69 109 6 1940 142 6 22 chr20 6357889 6358205 -65795677 + AluSx SINE Alu 1 311 -1 1496 192 37 0 chr20 6358280 6358551 -65795331 + AluJb SINE Alu 7 287 -25 28 48 0 0 chr20 6358552 6358594 -65795288 + AT_rich Low_complexity Low_complexity 1 42 0 395 246 80 45 chr20 6359131 6359264 -65794618 - MIR3 SINE MIR -30 178 41 523 274 22 22 chr20 6359817 6359996 -65793886 + L2 LINE L2 3135 3313 0 2011 123 7 3 chr20 6361264 6361549 -65792333 - AluSx SINE Alu -25 287 2 242 393 0 0 chr20 6361642 6361726 -65792156 + MIR3 SINE MIR 5 88 -120 2435 64 10 0 chr20 6361951 6362247 -65791635 - AluY SINE Alu -12 299 1 930 211 0 0 chr20 6362473 6362644 -65791238 - AluJb SINE Alu -8 304 134 1320 183 11 53 chr20 6363514 6363799 -65790083 + AluJb SINE Alu 1 273 -39 186 71 0 0 chr20 6363803 6363831 -65790051 + (CA)n Simple_repeat Simple_repeat 1 28 0 1503 189 17 36 chr20 6364196 6364497 -65789385 - AluJo SINE Alu -17 295 1 256 326 136 0 chr20 6365117 6365249 -65788633 - L2 LINE L2 -17 3296 3147 180 243 86 57 chr20 6365344 6365414 -65788468 - MIR SINE MIR -161 101 30 255 152 0 0 chr20 6366531 6366577 -65787305 + A-rich Low_complexity Low_complexity 1 46 0 194 61 0 30 chr20 6367199 6367232 -65786650 + (TA)n Simple_repeat Simple_repeat 1 32 0 1939 112 18 28 chr20 6367591 6367896 -65785986 + AluSx SINE Alu 1 302 0 244 155 17 17 chr20 6368049 6368107 -65785775 + CT-rich Low_complexity Low_complexity 2 59 0 24 32 0 0 chr20 6369021 6369052 -65784830 + AT_rich Low_complexity Low_complexity 1 31 0 189 0 0 0 chr20 6369395 6369416 -65784466 + (A)n Simple_repeat Simple_repeat 1 21 0 222 37 0 0 chr20 6369881 6369908 -65783974 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 2207 125 0 0 chr20 6370595 6370891 -65782991 + AluSx SINE Alu 1 296 -16 1758 171 4 0 chr20 6370911 6371174 -65782708 + AluJo SINE Alu 6 269 -43 469 218 45 26 chr20 6371335 6371491 -65782391 - MER104 DNA Tc2 -13 167 9 906 177 6 29 chr20 6371833 6372008 -65781874 - FRAM SINE Alu -9 167 1 2067 137 0 13 chr20 6372047 6372354 -65781528 - AluSx SINE Alu -9 303 1 1398 153 4 37 chr20 6372484 6372726 -65781156 + AluJb SINE Alu 63 296 -16 1740 157 14 10 chr20 6373429 6373722 -65780160 + AluJb SINE Alu 9 302 -10 275 217 61 6 chr20 6374017 6374097 -65779785 - MIR3 SINE MIR -35 173 88 324 102 0 0 chr20 6374995 6375044 -65778838 + (CA)n Simple_repeat Simple_repeat 2 50 0 21 36 0 0 chr20 6375066 6375094 -65778788 + AT_rich Low_complexity Low_complexity 1 28 0 2128 133 0 3 chr20 6375107 6375409 -65778473 + AluSg SINE Alu 1 301 -9 22 0 0 0 chr20 6375549 6375571 -65778311 + AT_rich Low_complexity Low_complexity 1 22 0 792 126 31 0 chr20 6375891 6376018 -65777864 + AluJ SINE Alu 1 131 -171 1509 88 0 0 chr20 6376022 6376214 -65777668 - AluSg SINE Alu -1 309 118 592 67 0 0 chr20 6376214 6376289 -65777593 - AluSg SINE Alu -234 75 1 1152 176 0 0 chr20 6376304 6376486 -65777396 + AluJ SINE Alu 131 312 0 24 60 0 30 chr20 6377850 6377875 -65776007 + AT_rich Low_complexity Low_complexity 1 25 -40 1877 149 14 0 chr20 6377875 6378164 -65775718 + AluJb SINE Alu 1 293 -19 24 60 0 30 chr20 6378164 6378205 -65775677 + AT_rich Low_complexity Low_complexity 25 65 0 2133 95 28 0 chr20 6378328 6378612 -65775270 - AluSx SINE Alu -16 296 5 355 82 0 0 chr20 6378613 6378662 -65775220 - Alu SINE Alu -251 50 2 2484 65 0 3 chr20 6379412 6379722 -65774160 + AluY SINE Alu 1 309 -2 1955 120 17 30 chr20 6379846 6380146 -65773736 - AluSx SINE Alu -16 296 1 297 0 0 0 chr20 6380783 6380816 -65773066 + (T)n Simple_repeat Simple_repeat 1 33 0 2813 3 0 10 chr20 6380871 6381185 -65772697 + AluY SINE Alu 1 311 0 2213 138 0 0 chr20 6381575 6381880 -65772002 + AluSx SINE Alu 1 305 -7 2169 94 37 3 chr20 6381921 6382220 -65771662 + AluSp SINE Alu 1 309 -4 1796 129 8 15 chr20 6382232 6382495 -65771387 + AluSq SINE Alu 1 261 -52 395 179 15 0 chr20 6382981 6383048 -65770834 - Tigger3(Golem) DNA MER2_type -1 3028 2961 501 220 0 0 chr20 6383062 6383153 -65770729 - Tigger3(Golem) DNA MER2_type -2938 91 1 204 97 0 0 chr20 6384583 6384614 -65769268 + (A)n Simple_repeat Simple_repeat 1 31 0 253 240 10 50 chr20 6386220 6386320 -65767562 - L1ME4a LINE L1 -59 6062 5967 2161 121 3 0 chr20 6386344 6386634 -65767248 - AluSg SINE Alu -19 291 1 2061 138 0 0 chr20 6387191 6387481 -65766401 + AluSx SINE Alu 1 290 -22 2312 113 0 0 chr20 6387513 6387822 -65766060 + AluSx SINE Alu 3 311 -1 2207 97 38 0 chr20 6388298 6388587 -65765295 + AluSp SINE Alu 1 300 -13 22 35 0 0 chr20 6388935 6388964 -65764918 + AT_rich Low_complexity Low_complexity 1 29 0 2172 108 3 10 chr20 6389227 6389522 -65764360 + AluSx SINE Alu 1 293 -19 353 298 43 0 chr20 6390334 6390428 -65763454 - MIR3 SINE MIR -30 178 81 222 289 126 15 chr20 6392488 6392623 -65761259 - L2 LINE L2 0 3313 3164 267 358 22 37 chr20 6392662 6392796 -65761086 - L2 LINE L2 -221 3051 2920 783 175 69 74 chr20 6393115 6393264 -65760618 + MER5A DNA MER1_type 2 151 -38 2236 84 3 14 chr20 6393264 6393560 -65760322 - AluY SINE Alu -18 293 1 783 175 69 74 chr20 6393560 6393599 -65760283 + MER5A DNA MER1_type 151 189 0 1194 151 34 0 chr20 6393719 6393925 -65759957 + Tigger1 DNA MER2_type 1 213 -2205 * 1482 138 20 0 chr20 6393923 6394169 -65759713 + Tigger1 DNA MER2_type 2003 2253 -165 601 62 0 0 chr20 6394185 6394297 -65759585 + L1PA6 LINE L1 6062 6173 0 2247 120 0 0 chr20 6394330 6394639 -65759243 + AluSg SINE Alu 2 310 0 416 288 46 20 chr20 6394850 6395003 -65758879 + MER5B DNA MER1_type 21 177 -1 1230 211 63 25 chr20 6395095 6395379 -65758503 + AluJo SINE Alu 3 297 -15 265 200 38 38 chr20 6396285 6396365 -65757517 - MER5C DNA MER1_type 0 324 245 469 229 8 34 chr20 6396414 6396532 -65757350 - MER5C DNA MER1_type -201 123 9 299 261 92 25 chr20 6396669 6396788 -65757094 - MIR3 SINE MIR -46 162 36 358 153 22 97 chr20 6397071 6397165 -65756717 + AluJo SINE Alu 48 125 -177 987 157 6 18 chr20 6397207 6397373 -65756509 + AluJo SINE Alu 118 281 -31 350 277 107 44 chr20 6397390 6397596 -65756286 + HAL1 LINE L1 2285 2503 -4 379 123 0 0 chr20 6398236 6398293 -65755589 + AluS SINE Alu 1 57 -242 1049 143 0 6 chr20 6398293 6398454 -65755428 + AluSg/x SINE Alu 142 301 -11 2078 126 7 0 chr20 6398535 6398821 -65755061 - AluSx SINE Alu -24 288 1 1686 127 3 121 chr20 6399242 6399374 -65754508 + AluSx SINE Alu 1 72 -230 1863 138 3 49 chr20 6399374 6399520 -65754362 + AluSx SINE Alu 1 127 -185 2229 97 14 0 chr20 6399520 6399809 -65754073 + AluSg SINE Alu 1 293 -17 1863 138 3 49 chr20 6399809 6399966 -65753916 + AluSx SINE Alu 127 290 -22 1686 127 3 121 chr20 6399966 6400163 -65753719 + AluSx SINE Alu 72 291 -11 788 197 56 0 chr20 6400183 6400325 -65753557 + FRAM SINE Alu 1 143 -33 2419 108 0 0 chr20 6400330 6400637 -65753245 - AluSx SINE Alu -5 307 1 331 283 177 79 chr20 6401567 6401664 -65752218 - L2 LINE L2 0 3272 3186 1976 154 0 22 chr20 6401664 6401975 -65751907 + AluSx SINE Alu 1 304 -8 2114 114 3 7 chr20 6401980 6402270 -65751612 + AluSg SINE Alu 1 289 -21 331 283 177 79 chr20 6402270 6402534 -65751348 - L2 LINE L2 -89 3183 2869 2453 92 0 0 chr20 6402712 6403015 -65750867 - AluSx SINE Alu -9 303 1 1370 196 76 11 chr20 6403628 6403743 -65750139 + AluJb SINE Alu 3 109 -203 288 0 0 0 chr20 6403743 6403775 -65750107 + (CA)n Simple_repeat Simple_repeat 2 33 0 1370 196 76 11 chr20 6403775 6403934 -65749948 + AluJb SINE Alu 109 295 -17 1803 84 9 0 chr20 6404468 6404695 -65749187 + AluSp SINE Alu 3 231 -82 832 209 65 10 chr20 6405521 6405722 -65748160 + MER20 DNA MER1_type 1 212 -7 2268 131 0 0 chr20 6405973 6406279 -65747603 + AluSx SINE Alu 1 306 -6 2183 107 45 0 chr20 6406279 6406569 -65747313 + AluSg SINE Alu 1 303 -7 1009 155 37 0 chr20 6406646 6406807 -65747075 + AluSg/x SINE Alu 137 303 -9 227 211 47 47 chr20 6409673 6409801 -65744081 + (CCCGG)n Simple_repeat Simple_repeat 2 129 0 24 53 0 0 chr20 6410004 6410042 -65743840 + GC_rich Low_complexity Low_complexity 1 38 0 2451 54 14 3 chr20 6410269 6410563 -65743319 + AluSx SINE Alu 1 297 -15 229 202 155 24 chr20 6410755 6410839 -65743043 + MER5A DNA MER1_type 11 105 -84 2293 82 0 0 chr20 6411053 6411357 -65742525 + AluSc SINE Alu 2 305 0 1905 145 20 0 chr20 6411485 6411789 -65742093 + AluSx SINE Alu 1 310 -2 191 204 68 23 chr20 6412012 6412056 -65741826 - L2 LINE L2 -2 3311 3266 2380 90 3 28 chr20 6412265 6412586 -65741296 - AluSq SINE Alu 0 313 1 1462 103 70 0 chr20 6412758 6412972 -65740910 + MER30 DNA MER1_type 2 230 0 2089 130 0 7 chr20 6413020 6413319 -65740563 + AluSc SINE Alu 1 297 -12 1717 176 19 32 chr20 6413537 6413850 -65740032 - AluJb SINE Alu -3 309 1 822 216 9 69 chr20 6414124 6414173 -65739709 + AluJb SINE Alu 82 132 -180 252 0 0 0 chr20 6414173 6414201 -65739681 + (TA)n Simple_repeat Simple_repeat 2 29 0 822 216 9 69 chr20 6414201 6414382 -65739500 + AluJb SINE Alu 132 298 -14 1991 155 0 0 chr20 6414463 6414754 -65739128 - AluSx SINE Alu -21 291 1 432 51 0 0 chr20 6414804 6414863 -65739019 + (TATG)n Simple_repeat Simple_repeat 2 60 0 1878 169 3 0 chr20 6414863 6415147 -65738735 - AluSx SINE Alu -27 285 1 305 195 143 39 chr20 6415165 6415211 -65738671 - AluJo SINE Alu -129 173 133 339 25 0 0 chr20 6415211 6415251 -65738631 + (TG)n Simple_repeat Simple_repeat 2 41 0 305 195 143 39 chr20 6415251 6415281 -65738601 - AluJo SINE Alu -169 133 89 1781 141 72 4 chr20 6415293 6415570 -65738312 - AluJb SINE Alu -16 296 1 2479 74 3 0 chr20 6415818 6416117 -65737765 + AluSp SINE Alu 1 300 -13 2255 103 14 0 chr20 6416200 6416492 -65737390 - AluSg SINE Alu -14 296 1 2518 80 3 0 chr20 6417035 6417347 -65736535 + AluSp SINE Alu 1 313 0 1594 199 7 14 chr20 6417602 6417913 -65735969 + AluSx SINE Alu 1 309 0 1705 205 3 3 chr20 6417914 6418217 -65735665 + AluJb SINE Alu 1 303 -9 1127 188 33 0 chr20 6418220 6418433 -65735449 - LTR8A LTR ERV1 -349 378 159 225 211 0 0 chr20 6418458 6418510 -65735372 + AluJ/monomer SINE Alu 250 301 -1 2321 98 3 13 chr20 6418530 6418845 -65735037 - AluSx SINE Alu 0 312 1 2295 117 3 0 chr20 6418845 6419152 -65734730 - AluSx SINE Alu -3 309 1 2122 129 3 0 chr20 6419202 6419489 -65734393 - AluSx SINE Alu -24 288 1 1024 70 0 28 chr20 6419546 6419689 -65734193 - Alu SINE Alu 0 310 172 2421 95 0 3 chr20 6419749 6420053 -65733829 + AluSx SINE Alu 2 304 -8 2260 117 7 0 chr20 6420689 6421012 -65732870 - AluSp SINE Alu 0 325 1 182 206 159 48 chr20 6421014 6421077 -65732805 + L2 LINE L2 3171 3240 -32 2604 44 0 0 chr20 6421224 6421522 -65732360 + AluY SINE Alu 1 298 -13 1854 165 0 31 chr20 6421935 6422257 -65731625 + AluJb SINE Alu 1 312 0 1034 161 0 6 chr20 6422348 6422509 -65731373 - AluJo SINE Alu -135 177 18 2155 144 0 0 chr20 6422609 6422915 -65730967 + AluSx SINE Alu 1 306 -6 848 199 0 119 chr20 6423016 6423252 -65730630 + AluSx SINE Alu 5 212 -100 1406 121 0 0 chr20 6423334 6423516 -65730366 + AluSg/x SINE Alu 97 278 -32 189 0 0 0 chr20 6423516 6423537 -65730345 + (CAAT)n Simple_repeat Simple_repeat 4 24 0 4561 105 38 31 chr20 6423561 6423723 -65730159 - LTR8 LTR ERV1 0 691 532 2164 109 10 23 chr20 6423723 6424027 -65729855 - AluSx SINE Alu -12 300 1 4561 105 38 31 chr20 6424027 6424550 -65729332 - LTR8 LTR ERV1 -159 532 1 2447 88 0 0 chr20 6424630 6424935 -65728947 + AluSq SINE Alu 1 305 -8 1813 180 30 10 chr20 6424943 6425248 -65728634 + AluJb SINE Alu 1 311 -1 2285 201 89 99 chr20 6425548 6426383 -65727499 + LTR1B LTR ERV1 1 826 0 23 0 0 0 chr20 6426982 6427005 -65726877 + AT_rich Low_complexity Low_complexity 1 23 0 1846 157 10 10 chr20 6427046 6427358 -65726524 - AluSx SINE Alu 0 312 1 1707 173 3 32 chr20 6427408 6427553 -65726329 + AluJo SINE Alu 1 149 -163 2055 118 3 14 chr20 6427553 6427842 -65726040 + AluSx SINE Alu 21 306 -6 1707 173 3 32 chr20 6427842 6428009 -65725873 + AluJo SINE Alu 149 304 -8 395 275 42 35 chr20 6428204 6428269 -65725613 - MIR SINE MIR -28 234 171 2351 84 0 0 chr20 6428269 6428603 -65725279 - AluSx SINE Alu 0 334 1 395 275 42 35 chr20 6428603 6428678 -65725204 - MIR SINE MIR -91 171 92 267 343 95 0 chr20 6428686 6428791 -65725091 + MIR SINE MIR 78 192 -70 368 284 106 21 chr20 6428940 6429081 -65724801 - MER63 DNA MER1_type -275 787 9 2044 115 43 0 chr20 6429440 6429719 -65724163 - AluSx SINE Alu -21 291 1 1256 164 0 36 chr20 6429850 6430069 -65723813 + AluJb SINE Alu 1 211 -101 962 132 102 0 chr20 6430069 6430236 -65723646 - LTR8 LTR ERV1 0 691 508 749 179 0 0 chr20 6430237 6430354 -65723528 + AluSq/x SINE Alu 3 119 -193 514 132 26 0 chr20 6430362 6430438 -65723444 + AluY SINE Alu 94 171 -140 1328 206 45 94 chr20 6430477 6430779 -65723103 - MLT1C LTR MaLR -61 406 130 1895 114 0 117 chr20 6430779 6430984 -65722898 - AluSx SINE Alu 0 302 151 2216 96 4 0 chr20 6430984 6431264 -65722618 - AluSp SINE Alu -32 281 1 1895 114 0 117 chr20 6431264 6431400 -65722482 - AluSx SINE Alu -151 151 1 1328 206 45 94 chr20 6431400 6431524 -65722358 - MLT1C LTR MaLR -337 130 1 1308 194 116 8 chr20 6431749 6432017 -65721865 - AluSg SINE Alu 0 310 14 2308 105 0 3 chr20 6432188 6432484 -65721398 + AluSg1 SINE Alu 1 295 -14 1241 171 146 50 chr20 6432526 6432807 -65721075 - AluSg SINE Alu 0 310 3 2238 120 0 0 chr20 6432856 6433157 -65720725 + AluSp SINE Alu 1 301 -12 2609 179 60 21 chr20 6433499 6434034 -65719848 - MER21A LTR ERV1 0 931 376 2422 104 15 29 chr20 6434051 6434486 -65719396 + MER41A LTR ERV1 1 470 -165 989 165 11 11 chr20 6434487 6434663 -65719219 + AluSg/x SINE Alu 137 312 0 2280 94 7 0 chr20 6434679 6434966 -65718916 + AluSp SINE Alu 1 289 -24 791 136 157 0 chr20 6434978 6435125 -65718757 + MER41B LTR ERV1 466 635 0 1010 161 11 0 chr20 6435217 6435391 -65718491 + AluY SINE Alu 136 311 0 1512 176 4 33 chr20 6435448 6435721 -65718161 + AluJb SINE Alu 36 300 -12 2217 100 91 0 chr20 6435735 6436096 -65717786 - MER39B LTR ERV1 0 653 260 303 93 0 0 chr20 6436100 6436143 -65717739 + (T)n Simple_repeat Simple_repeat 1 43 0 2379 100 0 0 chr20 6436184 6436484 -65717398 - AluSc SINE Alu -9 300 1 1523 179 4 0 chr20 6436511 6436740 -65717142 - AluSx SINE Alu -82 230 1 829 148 25 0 chr20 6436752 6436874 -65717008 - FLAM_C SINE Alu -18 125 1 217 376 80 0 chr20 6436919 6437044 -65716838 + L2 LINE L2 1086 1220 -2094 501 207 98 18 chr20 6437086 6437250 -65716632 - MLT1F1 LTR MaLR 0 567 391 300 53 0 0 chr20 6437283 6437321 -65716561 + (TCC)n Simple_repeat Simple_repeat 3 40 0 1611 154 23 53 chr20 6437334 6437633 -65716249 - AluJo SINE Alu -22 290 1 11084 51 9 12 chr20 6437645 6439025 -65714857 - SVA Other Other -9 1377 2 269 259 37 49 chr20 6439147 6439228 -65714654 - MLT1F1 LTR MaLR -304 286 207 2149 129 0 3 chr20 6439378 6439673 -65714209 - AluSx SINE Alu -18 294 1 2186 117 7 0 chr20 6439673 6439971 -65713911 - AluSx SINE Alu -12 300 1 2063 220 89 4 chr20 6440182 6440645 -65713237 - MLT1F LTR MaLR 0 542 41 926 153 0 7 chr20 6440700 6440837 -65713045 + AluJb SINE Alu 1 136 -176 2070 126 34 0 chr20 6440855 6441148 -65712734 + AluSx SINE Alu 1 303 -9 628 260 104 24 chr20 6441817 6442067 -65711815 + L2 LINE L2 1851 2120 -1194 669 210 0 8 chr20 6442077 6442196 -65711686 + AluSq/x SINE Alu 2 119 -193 2123 141 3 0 chr20 6442196 6442501 -65711381 - AluSx SINE Alu -6 306 1 1688 137 133 0 chr20 6442569 6442840 -65711042 - AluSx SINE Alu -5 307 1 888 284 177 28 chr20 6442902 6443459 -65710423 + L2 LINE L2 2144 2860 -453 2263 117 3 0 chr20 6443459 6443766 -65710116 + AluSx SINE Alu 1 308 -4 888 284 177 28 chr20 6443766 6444014 -65709868 + L2 LINE L2 2860 3070 -243 1102 185 17 0 chr20 6444239 6444417 -65709465 + AluJb SINE Alu 109 289 -23 1321 128 0 15 chr20 6445079 6445306 -65708576 - AluSg/x SINE Alu 0 308 85 618 110 12 0 chr20 6445306 6445388 -65708494 - AluSp/q SINE Alu -63 250 168 993 69 0 42 chr20 6445388 6445532 -65708350 + AluSp/q SINE Alu 176 313 0 1683 178 31 0 chr20 6445635 6445922 -65707960 + AluJb SINE Alu 1 296 -16 2121 122 3 0 chr20 6445943 6446237 -65707645 + AluY SINE Alu 1 295 -16 2389 78 3 16 chr20 6446687 6446996 -65706886 + AluSq SINE Alu 1 305 -8 241 293 0 0 chr20 6447243 6447318 -65706564 - MIR3 SINE MIR -9 199 125 1996 162 0 0 chr20 6447322 6447624 -65706258 + AluSx SINE Alu 1 302 -10 2221 122 0 0 chr20 6447635 6447967 -65705915 - AluSg SINE Alu 0 332 1 1470 157 0 8 chr20 6447992 6448228 -65705654 - AluJb SINE Alu -9 303 70 2388 102 0 0 chr20 6448322 6448626 -65705256 - AluSq SINE Alu -9 304 1 2182 85 3 21 chr20 6448662 6448967 -65704915 + AluSg SINE Alu 5 304 0 191 172 35 0 chr20 6448997 6449012 -65704870 + GA-rich Low_complexity Low_complexity 1 14 -46 1688 164 64 20 chr20 6449012 6449310 -65704572 + AluJb SINE Alu 1 311 -1 191 172 35 0 chr20 6449310 6449352 -65704530 + GA-rich Low_complexity Low_complexity 14 60 0 1874 118 70 0 chr20 6449740 6450010 -65703872 - AluSg SINE Alu -13 297 9 2278 102 0 0 chr20 6450023 6450340 -65703542 - AluSx SINE Alu 0 317 1 214 222 0 19 chr20 6450407 6450461 -65703421 - MIR SINE MIR -56 152 100 3764 93 15 99 chr20 6450596 6451281 -65702601 + MER4A LTR ERV1 1 627 -37 2183 138 0 0 chr20 6451281 6451579 -65702303 - AluSx SINE Alu -14 298 1 2243 130 3 0 chr20 6451924 6452232 -65701650 + AluSx SINE Alu 1 309 -3 2218 109 0 7 chr20 6452601 6452894 -65700988 - AluSx SINE Alu -19 293 3 2411 64 3 10 chr20 6453089 6453387 -65700495 - AluY SINE Alu -15 296 1 243 0 0 0 chr20 6453569 6453596 -65700286 + (TG)n Simple_repeat Simple_repeat 2 28 0 285 212 0 159 chr20 6453779 6453930 -65699952 + MIR SINE MIR 136 262 0 2308 102 3 0 chr20 6453969 6454262 -65699620 - AluSc SINE Alu -15 294 1 1524 177 7 21 chr20 6454292 6454574 -65699308 + AluJo SINE Alu 35 312 0 1904 114 25 89 chr20 6454762 6455077 -65698805 + AluJb SINE Alu 1 295 -17 335 241 190 26 chr20 6455082 6455198 -65698684 - MIR SINE MIR -10 252 118 236 235 111 12 chr20 6455200 6455281 -65698601 - MLT1K LTR MaLR -48 540 452 2501 44 7 3 chr20 6455457 6455754 -65698128 - AluY SINE Alu -9 302 5 809 275 95 64 chr20 6455954 6456376 -65697506 - LTR16A LTR ERVL 0 450 16 1883 160 0 0 chr20 6457031 6457163 -65696719 + AluJo SINE Alu 1 132 -180 1798 129 39 25 chr20 6457163 6457443 -65696439 + AluSx SINE Alu 15 298 -14 1883 160 0 0 chr20 6457443 6457597 -65696285 + AluJo SINE Alu 131 287 -25 631 248 0 35 chr20 6457662 6457803 -65696079 + AluJo SINE Alu 2 137 -175 521 148 0 87 chr20 6457799 6457914 -65695968 + FLAM_C SINE Alu 39 143 0 * 262 105 0 0 chr20 6458863 6458901 -65694981 - Alu SINE Alu -42 258 221 263 184 0 0 chr20 6458931 6458980 -65694902 + L1MC5 LINE L1 7843 7891 -70 2392 97 3 0 chr20 6459012 6459322 -65694560 + AluSx SINE Alu 1 311 -1 191 281 51 148 chr20 6459364 6459560 -65694322 - L2 LINE L2 -230 3042 2866 2045 127 20 0 chr20 6459750 6460042 -65693840 + AluSx SINE Alu 1 298 -14 2738 130 30 39 chr20 6460050 6460512 -65693370 + L1PB4 LINE L1 5581 6038 -118 1922 150 0 14 chr20 6460514 6460800 -65693082 + AluJo SINE Alu 1 282 -30 533 71 0 0 chr20 6460800 6460870 -65693012 - Alu SINE Alu -9 300 231 184 182 0 0 chr20 6461606 6461639 -65692243 + MIR SINE MIR 113 145 -63 936 294 87 32 chr20 6461971 6462440 -65691442 + L1ME LINE L1 5319 5813 -349 246 240 0 0 chr20 6462570 6462620 -65691262 + (TATATG)n Simple_repeat Simple_repeat 1 50 0 1480 116 98 0 chr20 6462639 6462854 -65691028 + AluSx SINE Alu 1 236 -76 229 111 0 0 chr20 6462887 6462923 -65690959 - HSMAR1 DNA Mariner -1250 37 2 2946 6 0 0 chr20 6464059 6464371 -65689511 + AluYb8 SINE Alu 1 312 -6 769 132 18 0 chr20 6464379 6464532 -65689350 + FLAM_C SINE Alu 1 155 0 252 83 0 0 chr20 6464539 6464575 -65689307 + MER94 DNA DNA 79 114 -20 2389 90 0 10 chr20 6464877 6465189 -65688693 - AluSg SINE Alu 0 310 2 1701 185 0 29 chr20 6465586 6465899 -65687983 + AluJo SINE Alu 3 306 -6 631 136 25 111 chr20 6465911 6466110 -65687772 - MER33 DNA MER1_type -3 321 140 579 76 0 13 chr20 6466115 6466194 -65687688 + MSTA LTR MaLR 1 78 -348 200 109 43 22 chr20 6466206 6466252 -65687630 + (TTTAA)n Simple_repeat Simple_repeat 4 50 0 1906 133 17 7 chr20 6466316 6466609 -65687273 + MSTA LTR MaLR 133 428 0 589 175 56 32 chr20 6466615 6466741 -65687141 - MER33 DNA MER1_type -195 129 1 361 18 0 54 chr20 6466769 6466825 -65687057 + (TTCC)n Simple_repeat Simple_repeat 2 54 0 2122 114 31 0 chr20 6466841 6467130 -65686752 - AluSx SINE Alu -14 298 1 381 202 24 12 chr20 6467476 6467560 -65686322 - L2 LINE L2 -15 3298 3214 1856 91 0 0 chr20 6467598 6467855 -65686027 + AluSx SINE Alu 55 311 0 1838 145 3 42 chr20 6468223 6468390 -65685492 - AluJb SINE Alu -14 298 147 2196 122 0 0 chr20 6468390 6468685 -65685197 - AluSq SINE Alu -18 295 1 1838 145 3 42 chr20 6468685 6468827 -65685055 - AluJb SINE Alu -165 147 1 318 254 0 0 chr20 6468848 6468911 -65684971 - ERVL LTR ERVL -826 4938 4876 2347 141 33 85 chr20 6469030 6469252 -65684630 - L1MB2 LINE L1 -2 6169 5937 1788 148 3 39 chr20 6469252 6469557 -65684325 - AluJo SINE Alu -18 294 1 2347 141 33 85 chr20 6469557 6469743 -65684139 - L1MB2 LINE L1 -234 5937 5786 1926 156 0 0 chr20 6469743 6470051 -65683831 - AluSx SINE Alu 0 308 1 2347 141 33 85 chr20 6470051 6470124 -65683758 - L1MB2 LINE L1 -385 5786 5711 899 243 99 56 chr20 6470176 6470550 -65683332 + MLT1I LTR MaLR 16 405 -4 326 227 205 22 chr20 6470550 6470735 -65683147 - L2 LINE L2 -264 3049 2831 30 27 0 0 chr20 6471116 6471153 -65682729 + AT_rich Low_complexity Low_complexity 1 37 0 1911 95 76 0 chr20 6471331 6471641 -65682241 - AluSx SINE Alu 0 330 1 1760 140 17 24 chr20 6471906 6472199 -65681683 + AluJb SINE Alu 1 291 -21 2332 91 0 0 chr20 6472199 6472496 -65681386 + AluY SINE Alu 3 299 -12 22 0 0 0 chr20 6472885 6472907 -65680975 + AT_rich Low_complexity Low_complexity 1 22 0 1958 164 0 3 chr20 6472931 6473218 -65680664 + AluSx SINE Alu 1 286 -26 466 221 160 8 chr20 6473675 6473806 -65680076 - MER20 DNA MER1_type -17 202 52 1066 232 59 11 chr20 6474811 6475083 -65678799 - L1MC4 LINE L1 -213 7829 7545 315 0 0 0 chr20 6475256 6475291 -65678591 + (A)n Simple_repeat Simple_repeat 1 35 0 430 297 31 0 chr20 6476005 6476133 -65677749 - MIR3 SINE MIR -41 167 36 972 229 52 68 chr20 6476274 6476584 -65677298 - MLT1B LTR MaLR -85 305 1 228 175 79 16 chr20 6476584 6476647 -65677235 - Charlie4 DNA MER1_type -1708 253 187 2192 98 190 6 chr20 6476647 6476994 -65676888 + LTR57 LTR ERVL 1 411 0 978 143 11 48 chr20 6477001 6477190 -65676692 - Charlie4 DNA MER1_type -1779 182 1 821 252 73 57 chr20 6477898 6478334 -65675548 + LTR16A1 LTR ERVL 13 455 -2 25 0 0 0 chr20 6480482 6480507 -65673375 + AT_rich Low_complexity Low_complexity 1 25 0 766 171 0 0 chr20 6480514 6480631 -65673251 - FLAM_C SINE Alu -25 118 2 489 184 54 41 chr20 6480654 6480801 -65673081 - L1ME3A LINE L1 -1 6169 6021 24 0 0 0 chr20 6481029 6481053 -65672829 + AT_rich Low_complexity Low_complexity 1 24 0 2641 104 6 8 chr20 6481126 6481491 -65672391 - THE1B LTR MaLR 0 364 1 220 250 135 48 chr20 6481527 6481631 -65672251 + L2 LINE L2 2593 2705 -609 230 274 49 10 chr20 6481897 6481999 -65671883 + L1P LINE L1 4954 5059 -1087 346 292 28 96 chr20 6482200 6482535 -65671347 + L1ME LINE L1 5295 5605 -516 2351 94 0 3 chr20 6482535 6482834 -65671048 - AluSx SINE Alu -14 298 1 346 292 28 96 chr20 6482834 6482861 -65671021 + L1ME LINE L1 5605 5632 -489 259 228 49 41 chr20 6482872 6482995 -65670887 + MER113 DNA MER1_type? 8 131 -390 314 294 92 35 chr20 6483171 6483534 -65670348 - L2 LINE L2 -203 3110 2719 336 220 97 40 chr20 6483597 6483793 -65670089 + L1M4 LINE L1 4926 5137 -1009 2057 113 0 55 chr20 6483794 6484104 -65669778 - AluSq SINE Alu -17 296 4 748 161 8 8 chr20 6484141 6484265 -65669617 - AluJb SINE Alu -187 125 2 487 259 140 9 chr20 6484303 6484531 -65669351 + L1MC4 LINE L1 7781 8038 -4 1478 144 10 100 chr20 6484531 6484830 -65669052 - AluJo SINE Alu -22 290 19 600 299 48 10 chr20 6485842 6486049 -65667833 + L1MDa LINE L1 15 229 -6311 246 156 89 0 chr20 6486081 6486171 -65667711 + GA-rich Low_complexity Low_complexity 5 102 0 2067 169 46 3 chr20 6486391 6486741 -65667141 - MLT1A1 LTR MaLR 0 365 1 402 277 134 5 chr20 6488162 6488364 -65665518 + L2 LINE L2 2842 3069 -244 742 261 58 4 chr20 6488403 6488644 -65665238 + HAL1 LINE L1 714 967 -1540 275 225 12 25 chr20 6488737 6488817 -65665065 + HAL1 LINE L1 1824 1902 -605 662 175 12 105 chr20 6488903 6488989 -65664893 - Tigger2 DNA MER2_type 0 2718 2654 2822 67 3 16 chr20 6488989 6489363 -65664519 - L1PA11 LINE L1 -1 6173 5805 662 175 12 105 chr20 6489363 6489447 -65664435 - Tigger2 DNA MER2_type -64 2654 2564 * 1406 120 10 0 chr20 6489446 6489654 -65664228 - Tigger2 DNA MER2_type -2508 210 1 850 249 75 61 chr20 6489658 6490148 -65663734 + HAL1 LINE L1 2011 2507 0 2134 110 0 58 chr20 6490176 6490503 -65663379 + AluSx SINE Alu 1 308 -4 499 156 9 9 chr20 6491129 6491238 -65662644 + (TAGA)n Simple_repeat Simple_repeat 4 112 0 515 170 18 45 chr20 6491851 6491963 -65661919 + MIR SINE MIR 31 139 -123 350 314 50 6 chr20 6492358 6492517 -65661365 + LTR67 LTR ERVL 384 549 -8 269 203 29 14 chr20 6492524 6492593 -65661289 + MIR SINE MIR 157 226 -36 231 36 0 0 chr20 6492692 6492720 -65661162 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 181 306 0 32 chr20 6492778 6492840 -65661042 + MER5B DNA MER1_type 17 76 -102 279 0 0 0 chr20 6492861 6492892 -65660990 + (TG)n Simple_repeat Simple_repeat 1 31 0 596 187 0 41 chr20 6492917 6493040 -65660842 - L1ME3 LINE L1 0 6162 6045 263 222 32 0 chr20 6494125 6494188 -65659694 - HAL1 LINE L1 -923 1584 1520 1609 254 71 117 chr20 6494190 6495472 -65658410 - L1MEd LINE L1 -4878 1241 19 180 0 0 0 chr20 6496462 6496482 -65657400 + (TA)n Simple_repeat Simple_repeat 2 21 0 2327 97 0 10 chr20 6496482 6496782 -65657100 - AluSx SINE Alu -11 301 5 783 244 91 0 chr20 6496922 6497131 -65656751 - MIR SINE MIR -13 249 22 1002 297 46 23 chr20 6497240 6497674 -65656208 + MARNA DNA Mariner 129 572 -14 2248 109 7 0 chr20 6498464 6498767 -65655115 + AluSq SINE Alu 1 305 -8 335 229 60 0 chr20 6498817 6498900 -65654982 + MLT1I LTR MaLR 314 401 -8 2104 103 27 3 chr20 6499131 6499423 -65654459 - AluSx SINE Alu -13 299 1 23 33 0 0 chr20 6499424 6499454 -65654428 + AT_rich Low_complexity Low_complexity 1 30 0 3183 231 57 12 chr20 6499717 6500833 -65653049 - L1MDb LINE L1 -4606 1800 658 240 297 31 0 chr20 6501231 6501295 -65652587 + C-rich Low_complexity Low_complexity 1 66 0 407 148 0 0 chr20 6501550 6501611 -65652271 - AluJ/FLAM SINE Alu -250 62 2 853 220 202 46 chr20 6501623 6502014 -65651868 + MLT1H LTR MaLR 98 549 0 1990 137 7 10 chr20 6502162 6502483 -65651399 - AluSx SINE Alu 0 312 1 639 185 122 44 chr20 6503161 6503424 -65650458 - MLT1J2 LTR MaLR -72 374 60 1847 157 7 13 chr20 6503711 6504016 -65649866 - AluJb SINE Alu -9 303 1 484 237 75 94 chr20 6504135 6504216 -65649666 + MIR SINE MIR 1 82 -180 1887 145 0 20 chr20 6504216 6504513 -65649369 - AluJo SINE Alu -21 291 1 484 237 75 94 chr20 6504513 6504697 -65649185 + MIR SINE MIR 82 261 -1 2267 101 3 0 chr20 6504702 6505000 -65648882 - AluSg SINE Alu -11 299 1 227 350 29 0 chr20 6505113 6505250 -65648632 + MIR SINE MIR 63 203 -59 1586 214 74 40 chr20 6507609 6508057 -65645825 - MLT1C LTR MaLR -2 465 3 232 269 15 30 chr20 6508215 6508282 -65645600 + MIR3 SINE MIR 119 184 -24 390 21 0 0 chr20 6508335 6508382 -65645500 + (CA)n Simple_repeat Simple_repeat 2 48 0 413 205 26 13 chr20 6508392 6508470 -65645412 + FRAM/FAM SINE Alu 6 84 -101 21 71 0 0 chr20 6510245 6510287 -65643595 + AT_rich Low_complexity Low_complexity 1 42 0 1286 194 0 104 chr20 6511390 6511535 -65642347 + AluY SINE Alu 1 93 -218 2243 108 0 0 chr20 6511535 6511830 -65642052 + AluSx SINE Alu 1 295 -17 1286 194 0 104 chr20 6511830 6512019 -65641863 + AluY SINE Alu 93 300 -11 26 0 0 0 chr20 6512384 6512410 -65641472 + AT_rich Low_complexity Low_complexity 1 26 0 221 320 100 20 chr20 6513555 6513655 -65640227 - MIR3 SINE MIR -99 109 2 1340 190 132 4 chr20 6513694 6513952 -65639930 + AluJb SINE Alu 1 291 -21 2206 83 0 21 chr20 6514204 6514569 -65639313 + AluSq SINE Alu 1 359 0 194 0 39 0 chr20 6514693 6514719 -65639163 + (CAAA)n Simple_repeat Simple_repeat 1 27 0 777 182 0 0 chr20 6515142 6515274 -65638608 + FLAM_C SINE Alu 2 133 0 1922 141 17 3 chr20 6516908 6517198 -65636684 - AluJb SINE Alu -17 295 2 27 29 0 0 chr20 6517467 6517501 -65636381 + AT_rich Low_complexity Low_complexity 1 34 0 2190 102 20 0 chr20 6517987 6518281 -65635601 + AluSp SINE Alu 7 306 -7 188 218 148 50 chr20 6518362 6518463 -65635419 + MIR SINE MIR 28 138 -124 710 220 0 0 chr20 6518867 6518999 -65634883 + MER58B DNA MER1_type 161 292 -49 244 138 31 0 chr20 6519179 6519244 -65634638 + A-rich Low_complexity Low_complexity 4 70 0 243 220 180 20 chr20 6519555 6519655 -65634227 + HAL1 LINE L1 22 137 -2370 1147 179 31 69 chr20 6519820 6519925 -65633957 + MER58B DNA MER1_type 61 168 -2252 1955 134 0 24 chr20 6519925 6520256 -65633626 + AluSx SINE Alu 1 324 0 2369 84 0 3 chr20 6520258 6520557 -65633325 + AluSx SINE Alu 4 301 -11 1147 179 31 69 chr20 6520557 6520737 -65633145 + MER58B DNA MER1_type 169 339 -2 528 282 97 31 chr20 6520935 6521126 -65632756 + HAL1 LINE L1 771 948 -1559 13416 124 51 30 chr20 6521126 6521297 -65632585 - Tigger1 DNA MER2_type 0 2418 2252 294 50 0 0 chr20 6521297 6521337 -65632545 + (CA)n Simple_repeat Simple_repeat 2 41 0 13416 124 51 30 chr20 6521337 6523384 -65630498 - Tigger1 DNA MER2_type -166 2252 143 1929 163 0 10 chr20 6523384 6523685 -65630197 + AluJb SINE Alu 1 298 -14 13416 124 51 30 chr20 6523685 6523828 -65630054 - Tigger1 DNA MER2_type -2275 143 5 528 282 97 31 chr20 6523828 6524058 -65629824 + HAL1 LINE L1 948 1220 -1287 739 282 85 36 chr20 6524229 6525002 -65628880 + L1MEd LINE L1 565 1403 -4726 1947 159 3 0 chr20 6525002 6525304 -65628578 + AluJb SINE Alu 1 303 -9 739 282 85 36 chr20 6525304 6525602 -65628280 + L1MEd LINE L1 1403 1685 -4444 24 77 0 0 chr20 6525990 6526042 -65627840 + AT_rich Low_complexity Low_complexity 1 52 0 599 271 111 52 chr20 6526072 6526273 -65627609 + L1MEd LINE L1 2263 2451 -3678 2228 111 0 9 chr20 6526273 6526588 -65627294 + AluSx SINE Alu 1 312 0 599 271 111 52 chr20 6526588 6526708 -65627174 + L1MEd LINE L1 2451 2562 -3567 2432 46 0 33 chr20 6526708 6527012 -65626870 + AluY SINE Alu 1 294 -17 599 271 111 52 chr20 6527012 6527437 -65626445 + L1MEd LINE L1 2562 3054 -3075 391 156 231 0 chr20 6527452 6527638 -65626244 + Charlie5 DNA MER1_type 2391 2619 0 1722 103 0 74 chr20 6527658 6527929 -65625953 + AluSx SINE Alu 1 251 -61 421 237 87 8 chr20 6527946 6528199 -65625683 + L1MEd LINE L1 3056 3328 -2801 344 135 0 0 chr20 6528199 6528251 -65625631 + MER66A LTR ERV1 287 338 -140 1153 219 99 128 chr20 6528416 6528888 -65624994 + L1MEd LINE L1 3433 3917 -2212 545 165 220 0 chr20 6528888 6528997 -65624885 + FLAM_C SINE Alu 1 133 -10 1153 219 99 128 chr20 6528997 6529402 -65624480 + L1MEd LINE L1 3917 4332 -1797 2070 142 7 3 chr20 6529402 6529704 -65624178 - AluSx SINE Alu -9 303 1 1153 219 99 128 chr20 6529704 6530138 -65623744 + L1MEd LINE L1 4332 4812 -1317 288 329 13 0 chr20 6530276 6530428 -65623454 + HAL1 LINE L1 1433 1586 -921 1273 179 22 0 chr20 6530437 6530660 -65623222 + AluJb SINE Alu 85 312 0 440 289 95 19 chr20 6530686 6530897 -65622985 + HAL1 LINE L1 1602 1828 -679 622 155 0 0 chr20 6531060 6531157 -65622725 + AluJ/FLAM SINE Alu 1 97 -215 189 0 0 0 chr20 6531164 6531185 -65622697 + (CA)n Simple_repeat Simple_repeat 1 21 0 21 0 0 0 chr20 6532292 6532313 -65621569 + AT_rich Low_complexity Low_complexity 1 21 0 26 50 0 0 chr20 6532818 6532858 -65621024 + AT_rich Low_complexity Low_complexity 1 40 0 751 213 86 25 chr20 6533343 6533540 -65620342 + MIR SINE MIR 52 260 -2 1396 277 177 57 chr20 6533667 6534292 -65619590 + L2 LINE L2 960 1509 -1805 734 160 48 0 chr20 6534292 6534417 -65619465 + FLAM_A SINE Alu 2 132 -1 1396 277 177 57 chr20 6534417 6535307 -65618575 + L2 LINE L2 1509 2656 -658 219 318 24 47 chr20 6535307 6535392 -65618490 + L2 LINE L2 2608 2690 -624 2126 117 13 0 chr20 6535755 6536063 -65617819 + AluSx SINE Alu 1 312 0 1636 143 0 8 chr20 6536601 6536839 -65617043 - AluJo SINE Alu -10 302 67 752 129 0 95 chr20 6538073 6538220 -65615662 + FLAM_C SINE Alu 1 133 0 2496 82 0 0 chr20 6538291 6538597 -65615285 - AluSg SINE Alu -4 306 1 317 235 193 84 chr20 6541000 6541359 -65612523 + L1M2 LINE L1 553 1349 -5500 23 33 0 0 chr20 6542095 6542125 -65611757 + AT_rich Low_complexity Low_complexity 1 30 0 450 231 48 0 chr20 6542172 6542276 -65611606 - MIR SINE MIR -62 200 92 28 29 0 0 chr20 6542648 6542683 -65611199 + AT_rich Low_complexity Low_complexity 1 35 0 28 29 0 0 chr20 6543833 6543868 -65610014 + AT_rich Low_complexity Low_complexity 1 35 0 1978 131 0 11 chr20 6544254 6544569 -65609313 - AluSx SINE Alu 0 314 3 640 156 0 0 chr20 6544906 6545002 -65608880 + AluJ/FLAM SINE Alu 1 96 -216 1011 160 0 32 chr20 6545065 6545252 -65608630 + AluJb SINE Alu 110 290 -22 2015 143 13 10 chr20 6545593 6545907 -65607975 - 7SLRNA srpRNA srpRNA -5 315 1 2060 157 15 0 chr20 6546239 6546571 -65607311 + MER1B DNA MER1_type 1 337 0 1563 173 6 58 chr20 6546949 6547261 -65606621 - AluJo SINE Alu -16 296 1 2287 107 10 0 chr20 6547348 6547646 -65606236 + AluSx SINE Alu 1 301 -11 989 206 56 36 chr20 6547681 6547987 -65605895 - MLT1D LTR MaLR -191 314 3 313 96 11 85 chr20 6548189 6548366 -65605516 + (TA)n Simple_repeat Simple_repeat 1 164 0 210 167 0 62 chr20 6548406 6548502 -65605380 + (TA)n Simple_repeat Simple_repeat 1 90 0 244 253 26 49 chr20 6549245 6549359 -65604523 - LTR67 LTR ERVL -357 200 38 1328 150 146 16 chr20 6549761 6550014 -65603868 + AluJo SINE Alu 1 286 -26 694 211 0 8 chr20 6550026 6550154 -65603728 + FLAM_A SINE Alu 1 127 -6 2204 100 19 7 chr20 6550159 6550468 -65603414 + AluSp SINE Alu 1 313 0 362 274 62 0 chr20 6550583 6550696 -65603186 - MER74A LTR ERVL -84 474 355 25 0 0 0 chr20 6550930 6550955 -65602927 + AT_rich Low_complexity Low_complexity 1 25 0 1094 141 0 0 chr20 6551120 6551276 -65602606 - AluSg/x SINE Alu -26 284 129 1717 183 24 7 chr20 6551346 6551641 -65602241 - AluJo SINE Alu -12 300 1 253 302 185 0 chr20 6551674 6551896 -65601986 - HAL1b LINE L1 -572 776 514 284 333 100 39 chr20 6551896 6552386 -65601496 + LTR67 LTR ERVL 23 542 -15 465 145 35 76 chr20 6552420 6552565 -65601317 + MER58 DNA MER1_type 86 224 -2196 1496 185 10 49 chr20 6552712 6553020 -65600862 - AluJo SINE Alu -14 298 3 438 65 0 0 chr20 6553116 6553178 -65600704 + (TG)n Simple_repeat Simple_repeat 1 62 0 220 319 106 38 chr20 6553623 6553783 -65600099 - MIR SINE MIR -27 235 65 283 329 13 0 chr20 6554857 6554933 -65598949 - L2 LINE L2 -36 3236 3160 586 266 23 23 chr20 6555196 6555289 -65598593 - MIR SINE MIR -54 208 113 479 111 0 25 chr20 6555289 6555370 -65598512 + MADE1 DNA Mariner 1 79 -1 586 266 23 23 chr20 6555370 6555453 -65598429 - MIR SINE MIR -148 114 32 425 261 0 0 chr20 6555838 6555926 -65597956 - L2 LINE L2 -17 3255 3168 2222 111 0 13 chr20 6557264 6557571 -65596311 + AluSx SINE Alu 2 304 -8 2085 119 10 0 chr20 6558224 6558519 -65595363 + AluSx SINE Alu 1 298 -14 183 279 313 25 chr20 6558533 6558734 -65595148 - MIR SINE MIR -1 261 3 315 189 74 82 chr20 6558949 6559071 -65594811 + L1MC4a LINE L1 5839 5959 -1849 2302 102 0 3 chr20 6559166 6559461 -65594421 - AluSx SINE Alu -18 294 1 752 252 102 29 chr20 6559670 6559983 -65593899 + L1MC4a LINE L1 5574 5909 -1899 1827 148 10 10 chr20 6560513 6560816 -65593066 + AluJb SINE Alu 1 303 -9 2078 129 0 3 chr20 6561794 6562089 -65591793 + AluSx SINE Alu 1 294 -18 2386 78 7 3 chr20 6562181 6562476 -65591406 - AluSc SINE Alu -13 296 1 230 322 25 8 chr20 6563556 6563677 -65590205 - L1ME4a LINE L1 -164 5957 5835 299 309 43 12 chr20 6563696 6563858 -65590024 - L1ME4a LINE L1 -352 5769 5603 2227 116 3 0 chr20 6563920 6564221 -65589661 - AluSx SINE Alu -10 302 1 238 223 117 21 chr20 6565582 6565676 -65588206 - HAL1b LINE L1 -1169 179 77 410 283 9 9 chr20 6566603 6566716 -65587166 - MER58 DNA MER1_type -2306 114 2 1877 148 0 0 chr20 6566747 6567025 -65586857 - AluSx SINE Alu -9 303 26 3011 246 103 36 chr20 6567229 6568505 -65585377 - L2 LINE L2 0 3313 1953 1993 121 24 24 chr20 6568776 6569073 -65584809 + AluSx SINE Alu 1 297 -15 280 215 183 11 chr20 6569189 6569282 -65584600 - L2 LINE L2 -7 3306 3198 431 248 115 73 chr20 6569809 6570043 -65583839 - MIR SINE MIR 0 262 19 501 284 204 10 chr20 6570216 6570417 -65583465 + MIR SINE MIR 6 245 -17 255 219 141 0 chr20 6570419 6570483 -65583399 + MER91B DNA MER1_type 2 74 -116 1641 184 13 20 chr20 6570662 6570786 -65583096 - AluJo SINE Alu -4 308 185 2261 189 111 34 chr20 6570786 6571310 -65582572 + LTR6A LTR ERV1 1 564 0 1641 184 13 20 chr20 6571310 6571490 -65582392 - AluJo SINE Alu -127 185 6 587 134 214 36 chr20 6571493 6571605 -65582277 - FLAM_C SINE Alu -10 133 2 2545 65 0 0 chr20 6571844 6572153 -65581729 + AluY SINE Alu 1 309 -2 1849 176 0 0 chr20 6572360 6572661 -65581221 - AluJo SINE Alu -9 303 3 428 313 50 19 chr20 6572928 6573088 -65580794 - MER5B DNA MER1_type -1 177 13 1699 181 21 3 chr20 6573212 6573500 -65580382 + AluJb SINE Alu 1 293 -19 2069 136 0 0 chr20 6573689 6573976 -65579906 + AluSx SINE Alu 5 291 -21 1219 148 0 0 chr20 6574910 6575092 -65578790 + AluSg/x SINE Alu 126 307 -5 1728 153 3 23 chr20 6575146 6575446 -65578436 + AluJb SINE Alu 14 307 -5 1959 169 87 28 chr20 6576145 6576535 -65577347 - MER4B LTR ERV1 -197 413 1 1539 186 0 36 chr20 6576535 6576842 -65577040 + AluJo SINE Alu 14 309 -3 398 273 91 6 chr20 6576967 6577132 -65576750 + LTR16C LTR ERVL 17 195 -296 335 193 159 11 chr20 6577264 6577352 -65576530 + LTR16C LTR ERVL 391 491 0 839 214 66 11 chr20 6577376 6577558 -65576324 - MER58A DNA MER1_type -3 221 30 2260 113 0 0 chr20 6578029 6578330 -65575552 - AluSx SINE Alu -11 301 1 548 258 71 11 chr20 6578498 6578680 -65575202 - MIR SINE MIR -58 204 12 309 244 58 12 chr20 6578860 6578905 -65574977 + MLT1L LTR MaLR 515 556 -59 1417 183 71 77 chr20 6578905 6579081 -65574801 - MER58B DNA MER1_type -2080 340 165 2382 73 3 0 chr20 6579081 6579367 -65574515 - AluSq SINE Alu -16 297 11 1417 183 71 77 chr20 6579367 6579528 -65574354 - MER58B DNA MER1_type -2255 165 5 309 244 58 12 chr20 6579528 6579568 -65574314 + MLT1L LTR MaLR 556 604 -11 467 277 161 43 chr20 6581110 6581673 -65572209 + HAL1 LINE L1 992 1719 -788 225 296 14 0 chr20 6581679 6581750 -65572132 + HAL1 LINE L1 1813 1884 -623 814 126 0 0 chr20 6582991 6583102 -65570780 - HY1 scRNA scRNA -1 111 1 189 310 149 23 chr20 6583136 6583223 -65570659 + MIR SINE MIR 48 145 -117 2303 80 3 29 chr20 6583804 6584117 -65569765 + AluY SINE Alu 1 305 -6 855 223 178 98 chr20 6584876 6584966 -65568916 + MLT1F1 LTR MaLR 1 82 -513 2973 6 0 0 chr20 6584966 6585284 -65568598 + AluYb8 SINE Alu 1 318 0 855 223 178 98 chr20 6585284 6585744 -65568138 + MLT1F1 LTR MaLR 82 595 0 601 151 0 11 chr20 6585908 6586001 -65567881 + AluJb SINE Alu 209 300 -12 880 155 0 8 chr20 6586416 6586545 -65567337 - FLAM_A SINE Alu -5 128 1 874 265 76 64 chr20 6586582 6586698 -65567184 + L1ME3 LINE L1 4987 5100 -1062 2173 104 3 0 chr20 6586698 6586986 -65566896 - AluSp SINE Alu -24 289 1 874 265 76 64 chr20 6586986 6587196 -65566686 + L1ME3 LINE L1 5100 5306 -856 1053 185 0 0 chr20 6587196 6587353 -65566529 + FRAM SINE Alu 2 158 -8 874 265 76 64 chr20 6587353 6587669 -65566213 + L1ME3 LINE L1 5306 5657 -505 2262 79 0 0 chr20 6587669 6587949 -65565933 + AluSg SINE Alu 27 306 -4 874 265 76 64 chr20 6587949 6588131 -65565751 + L1ME3 LINE L1 5657 5835 -327 2284 83 7 0 chr20 6589260 6589549 -65564333 - AluSc SINE Alu -18 291 1 1292 139 93 9 chr20 6589897 6590113 -65563769 - MER46A DNA MER2_type 0 236 3 1592 148 112 11 chr20 6590947 6591224 -65562658 + AluSg1 SINE Alu 2 306 -3 2033 117 33 10 chr20 6591573 6591873 -65562009 + AluSc SINE Alu 1 307 -2 772 255 52 14 chr20 6592673 6592885 -65560997 - MIR SINE MIR -29 233 14 2482 64 0 0 chr20 6593867 6594163 -65559719 + AluY SINE Alu 1 296 -15 297 0 0 0 chr20 6594168 6594201 -65559681 + (CA)n Simple_repeat Simple_repeat 1 33 0 330 309 171 6 chr20 6594348 6594523 -65559359 + LTR50 LTR ERVL 16 219 -576 514 245 121 29 chr20 6594625 6594939 -65558943 + LTR33A LTR ERVL 307 507 -16 235 164 0 49 chr20 6596094 6596155 -65557727 + L1MC2 LINE L1 6276 6333 -11 194 312 104 16 chr20 6596331 6596456 -65557426 - MIR3 SINE MIR -69 139 4 2046 96 17 43 chr20 6598268 6598569 -65555313 - AluSx SINE Alu -19 293 1 796 143 0 9 chr20 6598956 6599068 -65554814 - AluJb SINE Alu -187 125 15 182 36 0 36 chr20 6599489 6599517 -65554365 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 700 200 0 0 chr20 6599519 6599634 -65554248 - AluSg/x SINE Alu -29 280 166 1279 164 24 0 chr20 6599659 6599866 -65554016 - AluJb SINE Alu -100 212 1 273 209 152 29 chr20 6600074 6600179 -65553703 - LTR33 LTR ERVL -38 483 366 487 293 117 46 chr20 6600385 6600624 -65553258 + MIR SINE MIR 1 256 -6 241 333 32 24 chr20 6601374 6601500 -65552382 + MIR3 SINE MIR 15 141 -67 444 328 66 8 chr20 6601560 6601804 -65552078 + MIR SINE MIR 5 262 0 26 0 0 0 chr20 6601846 6601872 -65552010 + AT_rich Low_complexity Low_complexity 1 26 0 1029 271 192 17 chr20 6601979 6602689 -65551193 - L2 LINE L2 -14 3299 2453 27 73 0 0 chr20 6603527 6603582 -65550300 + AT_rich Low_complexity Low_complexity 1 55 0 1601 146 3 128 chr20 6606680 6607023 -65546859 + AluY SINE Alu 2 301 0 997 243 113 60 chr20 6607326 6607758 -65546124 - LTR16B LTR ERVL 0 464 10 2413 84 3 6 chr20 6608128 6608439 -65545443 - AluSg SINE Alu 0 310 1 791 232 13 13 chr20 6608538 6608693 -65545189 + FRAM SINE Alu 1 155 -11 410 152 0 13 chr20 6608693 6608772 -65545110 + GA-rich Low_complexity Low_complexity 3 80 0 225 250 0 0 chr20 6609838 6609914 -65543968 + (CATATA)n Simple_repeat Simple_repeat 6 81 0 2052 110 13 0 chr20 6610405 6610706 -65543176 + AluSq SINE Alu 1 305 -8 583 207 32 48 chr20 6611135 6611323 -65542559 - MER5A DNA MER1_type -2 187 3 186 71 0 0 chr20 6612171 6612199 -65541683 + (T)n Simple_repeat Simple_repeat 1 28 0 183 80 0 0 chr20 6612509 6612534 -65541348 + (TTAAA)n Simple_repeat Simple_repeat 2 26 0 2034 117 3 7 chr20 6612543 6612843 -65541039 + AluSx SINE Alu 1 299 -13 1276 163 80 64 chr20 6612907 6613220 -65540662 + MER58B DNA MER1_type 24 341 0 900 236 51 4 chr20 6613355 6613592 -65540290 + L2 LINE L2 1932 2179 -1135 2022 180 42 102 chr20 6613592 6613917 -65539965 - LTR55 LTR ERV -5 543 267 1865 142 0 0 chr20 6613917 6614199 -65539683 - AluJb SINE Alu -5 307 26 2022 180 42 102 chr20 6614199 6614450 -65539432 - LTR55 LTR ERV -281 267 2 2272 243 121 9 chr20 6614451 6615238 -65538644 + L2 LINE L2 2178 3047 -266 2052 115 7 3 chr20 6615336 6615641 -65538241 - AluSq SINE Alu -7 306 1 324 253 53 111 chr20 6615757 6615878 -65538004 + HAL1 LINE L1 2324 2432 -75 1497 215 111 14 chr20 6615878 6616302 -65537580 - MLT1C LTR MaLR 0 467 3 324 253 53 111 chr20 6616302 6616370 -65537512 + HAL1 LINE L1 2432 2502 -5 210 37 0 0 chr20 6616670 6616697 -65537185 + (TG)n Simple_repeat Simple_repeat 1 27 0 1173 263 24 58 chr20 6616973 6617234 -65536648 - LTR16C LTR ERVL -2 489 246 1965 204 12 46 chr20 6617234 6617715 -65536167 + MLT1C LTR MaLR 1 465 -2 1173 263 24 58 chr20 6617715 6617868 -65536014 - LTR16C LTR ERVL -245 246 89 987 170 131 5 chr20 6618105 6618311 -65535571 + MER34C LTR ERV1 1 232 -353 507 196 65 82 chr20 6620531 6620832 -65533050 + LTR48 LTR ERV1 378 781 -6 496 263 99 11 chr20 6620998 6621180 -65532702 - MIR SINE MIR -6 256 54 1913 148 0 3 chr20 6621188 6621485 -65532397 - AluJb SINE Alu -15 297 2 288 0 0 0 chr20 6621485 6621517 -65532365 + (TC)n Simple_repeat Simple_repeat 2 33 0 * 474 18 0 0 chr20 6621516 6621571 -65532311 + (TA)n Simple_repeat Simple_repeat 2 56 0 1478 120 171 12 chr20 6621578 6621836 -65532046 - AluSg SINE Alu 0 300 2 707 191 191 0 chr20 6622791 6622948 -65530934 + MER5A DNA MER1_type 1 187 -2 589 221 104 12 chr20 6623168 6623331 -65530551 + MER5B DNA MER1_type 1 178 0 184 250 28 56 chr20 6623493 6623565 -65530317 + L2 LINE L2 2679 2748 -566 264 269 75 54 chr20 6625587 6625680 -65528202 - MIR3 SINE MIR 0 208 114 1061 116 52 174 chr20 6626304 6626649 -65527233 + MER33 DNA MER1_type 22 324 0 1422 188 104 20 chr20 6626939 6627284 -65526598 + MLT1A2 LTR MaLR 1 374 0 180 349 48 24 chr20 6627653 6627736 -65526146 + L3 LINE CR1 1493 1577 0 722 293 75 14 chr20 6627932 6628212 -65525670 + MER102a DNA MER1_type 2 298 -32 2251 100 0 0 chr20 6628798 6629109 -65524773 - AluY SINE Alu 0 311 1 1396 115 8 47 chr20 6629223 6629457 -65524425 - AluSg/x SINE Alu -4 306 82 2030 102 3 48 chr20 6629468 6629783 -65524099 - AluSq SINE Alu -8 305 5 508 298 60 18 chr20 6630411 6630579 -65523303 - MIR3 SINE MIR -1 207 33 476 214 145 0 chr20 6631491 6631622 -65522260 + L1ME3A LINE L1 6019 6168 -2 1990 102 32 3 chr20 6631627 6631911 -65521971 + AluSg SINE Alu 1 292 -18 29 60 0 0 chr20 6632267 6632317 -65521565 + AT_rich Low_complexity Low_complexity 1 50 0 2239 109 0 6 chr20 6633708 6634021 -65519861 + AluSx SINE Alu 1 311 -1 1066 141 61 5 chr20 6634250 6634448 -65519434 + L1MB7 LINE L1 5976 6184 0 24 32 0 0 chr20 6634471 6634502 -65519380 + AT_rich Low_complexity Low_complexity 1 31 0 228 67 0 0 chr20 6634980 6635010 -65518872 + (CA)n Simple_repeat Simple_repeat 2 31 0 314 149 218 11 chr20 6637500 6637551 -65516331 + L1MC4a LINE L1 7598 7637 -171 645 14 0 0 chr20 6637551 6637625 -65516257 + (TATTG)n Simple_repeat Simple_repeat 2 75 0 314 149 218 11 chr20 6637625 6637660 -65516222 + L1MC4a LINE L1 7637 7702 -106 876 136 0 0 chr20 6637661 6637793 -65516089 + AluJb SINE Alu 2 133 -179 375 169 0 0 chr20 6637793 6637864 -65516018 + GA-rich Low_complexity Low_complexity 2 72 0 1133 204 11 8 chr20 6637864 6638124 -65515758 + L1MC4 LINE L1 7782 8042 0 2145 93 3 0 chr20 6638648 6638939 -65514943 - AluY SINE Alu -19 292 1 673 256 24 104 chr20 6638940 6639179 -65514703 - L1M4 LINE L1 -1196 4950 4762 1819 176 0 3 chr20 6639179 6639492 -65514390 - AluJb SINE Alu 0 312 1 673 256 24 104 chr20 6639492 6639702 -65514180 - L1M4 LINE L1 -1384 4762 4537 180 0 0 0 chr20 6639718 6639738 -65514144 + (T)n Simple_repeat Simple_repeat 1 20 0 397 186 14 0 chr20 6639743 6639813 -65514069 - AluJ/FLAM SINE Alu -231 71 1 892 209 107 111 chr20 6640049 6640517 -65513365 - LTR33A LTR ERVL -51 472 7 1512 170 30 7 chr20 6640852 6641123 -65512759 + AluJo SINE Alu 13 289 -23 346 214 22 22 chr20 6641144 6641233 -65512649 - MLT1H LTR MaLR -460 89 1 200 292 0 0 chr20 6641609 6641657 -65512225 + (TATG)n Simple_repeat Simple_repeat 4 51 0 282 242 194 0 chr20 6642107 6642229 -65511653 + Charlie4 DNA MER1_type 177 1774 -187 471 48 0 0 chr20 6642230 6642292 -65511590 + (CA)n Simple_repeat Simple_repeat 2 63 0 1957 124 0 20 chr20 6642317 6642615 -65511267 + AluSc SINE Alu 1 292 -17 250 261 0 15 chr20 6642619 6642684 -65511198 + Charlie4 DNA MER1_type 1898 1961 0 1206 256 80 6 chr20 6642894 6643257 -65510625 + L2 LINE L2 1890 2279 -1035 921 230 80 13 chr20 6643262 6643501 -65510381 + MIR SINE MIR 8 262 0 297 354 164 3 chr20 6643518 6643823 -65510059 - L2 LINE L2 -983 2331 1978 186 344 42 91 chr20 6643917 6644202 -65509680 + L2 LINE L2 2919 3189 -83 389 311 24 6 chr20 6644204 6644307 -65509575 + (CAT)n Simple_repeat Simple_repeat 1 110 -57 2179 107 3 10 chr20 6644307 6644615 -65509267 - AluSq SINE Alu -7 306 1 389 311 24 6 chr20 6644615 6644675 -65509207 + (CAT)n Simple_repeat Simple_repeat 110 167 0 315 131 0 71 chr20 6644679 6644778 -65509104 + (CACCAT)n Simple_repeat Simple_repeat 6 97 0 317 248 43 60 chr20 6644800 6644917 -65508965 - MIR SINE MIR -27 235 121 417 293 47 26 chr20 6645934 6646125 -65507757 - MIR3 SINE MIR 0 208 14 526 243 155 0 chr20 6646612 6646760 -65507122 + MIR SINE MIR 3 173 -89 33 43 0 0 chr20 6649451 6649498 -65504384 + AT_rich Low_complexity Low_complexity 1 47 0 2457 109 11 22 chr20 6649509 6649868 -65504014 + THE1A LTR MaLR 1 355 0 311 133 19 133 chr20 6649917 6650022 -65503860 + L1ME4a LINE L1 5975 6067 -54 683 178 85 0 chr20 6650628 6650757 -65503125 + FLAM_C SINE Alu 1 140 -3 277 198 270 9 chr20 6651379 6651490 -65502392 - MIR SINE MIR -17 245 106 2070 118 0 16 chr20 6651546 6651850 -65502032 - AluSx SINE Alu -13 299 1 805 275 42 72 chr20 6652358 6652693 -65501189 - LTR16C LTR ERVL -5 486 162 224 302 177 10 chr20 6652886 6652982 -65500900 + L2 LINE L2 3199 3310 -3 436 270 48 48 chr20 6653344 6653470 -65500412 - MIR3 SINE MIR -1 207 82 226 360 46 26 chr20 6654412 6654565 -65499317 + MIR3 SINE MIR 3 158 -50 185 278 45 90 chr20 6654568 6654701 -65499181 - L2 LINE L2 -9 3263 3137 299 374 37 0 chr20 6654745 6654852 -65499030 + L2 LINE L2 3151 3261 -11 2089 107 7 3 chr20 6654852 6655151 -65498731 + AluSq SINE Alu 1 300 -13 1868 178 93 137 chr20 6655429 6655614 -65498268 + L1ME3 LINE L1 5343 5534 -628 376 212 7 11 chr20 6655614 6655706 -65498176 - FLAM SINE Alu -10 123 60 1868 178 93 137 chr20 6655706 6656105 -65497777 + L1ME3 LINE L1 5534 5987 -175 199 266 133 8 chr20 6656170 6656298 -65497584 - L2 LINE L2 -302 2970 2827 889 225 117 57 chr20 6656355 6656741 -65497141 + MLT1I LTR MaLR 1 409 0 391 258 189 30 chr20 6656777 6656909 -65496973 - L2 LINE L2 0 3313 3161 37 0 0 0 chr20 6656921 6656958 -65496924 + AT_rich Low_complexity Low_complexity 1 37 0 210 232 207 66 chr20 6656968 6657166 -65496716 - L2 LINE L2 -159 3154 2929 521 266 106 29 chr20 6657167 6657374 -65496508 - L2 LINE L2 -605 2709 2487 773 178 66 116 chr20 6657374 6657540 -65496342 + MLT1D LTR MaLR 1 153 -352 2320 79 3 9 chr20 6657540 6657855 -65496027 - AluSp SINE Alu 0 313 1 773 178 66 116 chr20 6657855 6657930 -65495952 + MLT1D LTR MaLR 153 230 -275 1348 153 96 0 chr20 6657933 6658162 -65495720 + AluJb SINE Alu 1 251 -61 809 281 191 12 chr20 6658174 6658662 -65495220 - L2 LINE L2 -1007 2307 1733 2190 251 18 30 chr20 6658690 6658753 -65495129 - MLT1H1 LTR MaLR 0 555 493 3603 152 25 17 chr20 6658753 6658957 -65494925 - MER6A DNA MER2_type -260 605 404 2128 109 0 3 chr20 6658957 6659259 -65494623 + AluSg SINE Alu 1 301 -9 3603 152 25 17 chr20 6659259 6659654 -65494228 - MER6A DNA MER2_type -461 404 1 2190 251 18 30 chr20 6659654 6660090 -65493792 - MLT1H1 LTR MaLR -62 493 61 2095 100 7 3 chr20 6660090 6660391 -65493491 - AluSx SINE Alu -10 302 1 2190 251 18 30 chr20 6660391 6660452 -65493430 - MLT1H1 LTR MaLR -494 61 1 241 298 262 19 chr20 6660459 6660768 -65493114 - L2 LINE L2 -1635 1679 1296 183 256 128 64 chr20 6660903 6661028 -65492854 - MIR SINE MIR -8 254 122 444 266 100 57 chr20 6661239 6661322 -65492560 + MARNA DNA Mariner 129 207 -379 225 0 0 0 chr20 6661322 6661347 -65492535 + (CA)n Simple_repeat Simple_repeat 1 25 0 444 266 100 57 chr20 6661347 6661564 -65492318 + MARNA DNA Mariner 207 442 -144 302 221 53 32 chr20 6661805 6661900 -65491982 - MLT1L LTR MaLR -2 613 517 * 589 235 126 75 chr20 6661898 6662226 -65491656 - MLT1L LTR MaLR -238 288 1 1855 166 3 3 chr20 6662300 6662601 -65491281 + AluJb SINE Alu 1 301 -11 329 248 64 0 chr20 6663304 6663413 -65490469 + MIR SINE MIR 12 127 -135 636 187 216 18 chr20 6663416 6663587 -65490295 - MER63A DNA MER1_type -5 205 1 1993 107 0 0 chr20 6664048 6664300 -65489582 - AluSp SINE Alu -61 252 1 350 195 3 111 chr20 6664478 6664605 -65489277 - MLT1F1 LTR MaLR 0 567 434 1821 203 47 18 chr20 6665053 6665334 -65488548 - MLT1C LTR MaLR 0 467 167 2058 125 3 7 chr20 6665334 6665629 -65488253 - AluSq SINE Alu -19 294 1 1821 203 47 18 chr20 6665629 6665796 -65488086 - MLT1C LTR MaLR -300 167 6 442 177 0 0 chr20 6666019 6666098 -65487784 + MER96 DNA MER1_type? 97 175 0 220 118 333 0 chr20 6666099 6666150 -65487732 - MER5A DNA MER1_type -113 76 9 254 96 0 19 chr20 6666624 6666676 -65487206 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 358 221 0 0 chr20 6666708 6666776 -65487106 - FRAM SINE Alu -24 142 75 911 128 16 0 chr20 6667270 6667395 -65486487 - FLAM_C SINE Alu -16 127 1 210 23 45 45 chr20 6667462 6667506 -65486376 + (TTTG)n Simple_repeat Simple_repeat 1 44 0 2224 80 7 0 chr20 6667513 6667789 -65486093 - AluSp SINE Alu -35 278 1 1836 145 38 7 chr20 6668117 6668407 -65485475 - AluJo SINE Alu -13 299 1 2393 77 3 16 chr20 6668575 6668886 -65484996 + AluSp SINE Alu 7 313 0 184 217 167 0 chr20 6669124 6669184 -65484698 + MIR SINE MIR 71 140 -68 198 0 0 0 chr20 6669337 6669359 -65484523 + (TG)n Simple_repeat Simple_repeat 2 23 0 2273 108 7 3 chr20 6672486 6672793 -65481089 - AluSx SINE Alu -4 308 1 860 196 17 6 chr20 6672911 6673084 -65480798 - MER5B DNA MER1_type -3 175 1 1216 138 60 112 chr20 6673305 6673573 -65480309 - AluJo SINE Alu -29 283 30 637 276 199 8 chr20 6674648 6675114 -65478768 - L2 LINE L2 -4 3309 2749 773 206 0 0 chr20 6675132 6675258 -65478624 - FLAM_C SINE Alu -14 129 4 2790 241 65 33 chr20 6675260 6675818 -65478064 - L2 LINE L2 -567 2747 2143 1369 197 88 7 chr20 6675818 6676102 -65477780 + AluJo SINE Alu 1 307 -5 2790 241 65 33 chr20 6676102 6676531 -65477351 - L2 LINE L2 -1171 2143 1729 2038 138 6 13 chr20 6677461 6677773 -65476109 - AluSx SINE Alu -2 310 1 720 144 0 0 chr20 6678360 6678471 -65475411 + FLAM_C SINE Alu 1 111 -32 201 39 0 0 chr20 6678507 6678533 -65475349 + (A)n Simple_repeat Simple_repeat 1 26 0 2009 158 3 0 chr20 6679509 6679806 -65474076 - AluSx SINE Alu -14 298 1 1934 134 17 3 chr20 6680382 6680672 -65473210 + AluSx SINE Alu 1 294 -18 2321 88 0 10 chr20 6680674 6680969 -65472913 + AluSc SINE Alu 3 294 -15 2236 112 146 8 chr20 6681366 6681742 -65472140 + MSTA LTR MaLR 1 428 0 568 272 68 19 chr20 6681746 6681952 -65471930 + MLT1H LTR MaLR 36 251 -298 2185 114 0 10 chr20 6682119 6682416 -65471466 - AluSx SINE Alu -10 302 9 2298 94 17 0 chr20 6683440 6683737 -65470145 - AluSx SINE Alu -10 302 1 266 315 43 27 chr20 6684099 6684283 -65469599 + MIR SINE MIR 44 230 -32 2325 89 0 0 chr20 6684895 6685186 -65468696 - AluSc SINE Alu -18 291 1 1039 189 82 0 chr20 6685313 6685509 -65468373 + AluJo SINE Alu 28 239 -73 28 0 0 0 chr20 6685537 6685565 -65468317 + AT_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr20 6685597 6685627 -65468255 + AT_rich Low_complexity Low_complexity 1 30 0 2189 125 3 0 chr20 6685696 6686001 -65467881 + AluSx SINE Alu 2 307 -5 2164 125 0 7 chr20 6686038 6686343 -65467539 - AluSx SINE Alu -7 305 3 1284 101 0 28 chr20 6686751 6686930 -65466952 - AluSg/x SINE Alu -13 297 124 2053 144 7 0 chr20 6687076 6687368 -65466514 + AluJb SINE Alu 1 294 -18 470 321 46 25 chr20 6687394 6687631 -65466251 - L1MEd LINE L1 -5635 484 243 28 48 0 0 chr20 6687857 6687899 -65465983 + AT_rich Low_complexity Low_complexity 1 42 0 195 302 52 42 chr20 6687913 6688009 -65465873 - MIR3 SINE MIR -28 180 84 201 305 0 0 chr20 6688040 6688099 -65465783 + CT-rich Low_complexity Low_complexity 1 59 0 2270 126 3 0 chr20 6688488 6688798 -65465084 + AluSx SINE Alu 1 311 -1 665 254 57 10 chr20 6689420 6689613 -65464269 - MIR SINE MIR -12 250 49 621 179 0 9 chr20 6689863 6689975 -65463907 - MER3 DNA MER1_type 0 209 99 264 233 105 38 chr20 6690040 6690173 -65463709 + L1ME3A LINE L1 6029 6170 0 1621 163 4 0 chr20 6691057 6691302 -65462580 + AluJb SINE Alu 1 246 -66 1976 148 7 10 chr20 6692617 6692927 -65460955 - AluJb SINE Alu -3 309 1 524 263 60 50 chr20 6693088 6693369 -65460513 + L1MB4 LINE L1 4562 4845 -1301 45 0 0 0 chr20 6693369 6693414 -65460468 + AT_rich Low_complexity Low_complexity 1 45 0 3313 172 51 22 chr20 6693563 6693934 -65459948 + L1MB4 LINE L1 5428 5826 -354 2206 107 7 7 chr20 6693934 6694233 -65459649 + AluSq SINE Alu 1 299 -14 3313 172 51 22 chr20 6694233 6694489 -65459393 + L1MB4 LINE L1 5826 6073 -107 1354 181 61 34 chr20 6694538 6694817 -65459065 + AluJo SINE Alu 12 301 -11 693 114 70 0 chr20 6694817 6694931 -65458951 + L1MB4 LINE L1 6059 6180 0 1354 181 61 34 chr20 6694931 6694944 -65458938 + AluJo SINE Alu 301 312 0 2431 176 28 24 chr20 6694948 6695442 -65458440 + L1MB7 LINE L1 5681 6176 -8 28 71 0 0 chr20 6695658 6695714 -65458168 + AT_rich Low_complexity Low_complexity 1 56 0 479 279 60 50 chr20 6695716 6696014 -65457868 + L1ME LINE L1 5258 5558 -604 2160 118 0 10 chr20 6696463 6696769 -65457113 - AluSx SINE Alu -9 303 1 328 82 0 0 chr20 6696793 6696842 -65457040 - L1MB3 LINE L1 -4 6179 6131 870 127 0 0 chr20 6696852 6696978 -65456904 - FRAM SINE Alu -23 153 28 2433 97 0 0 chr20 6697212 6697520 -65456362 + AluSx SINE Alu 5 312 0 1009 254 140 29 chr20 6697998 6698411 -65455471 - L1MC4a LINE L1 -1888 5920 5462 309 277 0 27 chr20 6698421 6698533 -65455349 - L1MC4a LINE L1 -2444 5364 5256 2192 128 0 0 chr20 6698686 6698984 -65454898 - AluSq SINE Alu -15 298 1 913 254 110 18 chr20 6700126 6700527 -65453355 + Charlie4a DNA MER1_type 3 440 -68 208 300 0 0 chr20 6700544 6700594 -65453288 + L2 LINE L2 3246 3295 -18 207 0 0 0 chr20 6700863 6700886 -65452996 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 2342 117 0 0 chr20 6701729 6702038 -65451844 + AluSg SINE Alu 1 309 -1 1281 133 27 106 chr20 6702570 6702667 -65451215 + MER46A DNA MER2_type 1 104 -2627 1980 138 0 0 chr20 6702667 6702979 -65450903 - AluSx SINE Alu 0 312 1 1281 133 27 106 chr20 6702979 6703136 -65450746 + MER46A DNA MER2_type 104 236 0 2144 117 13 13 chr20 6703341 6703640 -65450242 + AluSx SINE Alu 1 299 -13 500 185 229 13 chr20 6703745 6703902 -65449980 + MER3 DNA MER1_type 6 196 -13 2351 98 0 7 chr20 6704431 6704737 -65449145 + AluSp SINE Alu 1 304 -9 731 183 0 0 chr20 6705458 6705573 -65448309 + FLAM_A SINE Alu 1 115 -18 207 0 0 0 chr20 6705576 6705599 -65448283 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1170 142 0 0 chr20 6705749 6705918 -65447964 - AluSg/x SINE Alu -11 299 131 2271 131 0 0 chr20 6706163 6706475 -65447407 + AluSx SINE Alu 1 312 0 1812 166 3 41 chr20 6706670 6706989 -65446893 - AluJb SINE Alu -5 307 1 21 0 0 0 chr20 6707441 6707462 -65446420 + AT_rich Low_complexity Low_complexity 1 21 0 258 217 78 54 chr20 6707681 6707810 -65446072 - L1MC5 LINE L1 -46 7915 7784 2395 92 57 20 chr20 6707823 6708172 -65445710 + THE1B LTR MaLR 1 362 -2 787 231 166 21 chr20 6708330 6708717 -65445165 + LTR16C LTR ERVL 19 486 -5 194 326 163 0 chr20 6709472 6709564 -65444318 - L2 LINE L2 0 3272 3166 624 211 58 63 chr20 6709648 6709871 -65444011 + L2 LINE L2 3092 3313 0 952 92 7 21 chr20 6711046 6711188 -65442694 + L1PA7 LINE L1 6008 6147 -7 222 177 16 16 chr20 6711195 6711257 -65442625 + A-rich Low_complexity Low_complexity 2 63 0 2090 135 3 3 chr20 6711260 6711556 -65442326 + AluSq SINE Alu 1 296 -17 2206 80 0 15 chr20 6712091 6712249 -65441633 - AluSx SINE Alu -21 291 137 2235 87 0 0 chr20 6712249 6712524 -65441358 - AluSg SINE Alu -14 296 22 2206 80 0 15 chr20 6712524 6712639 -65441243 - AluSx SINE Alu -175 137 22 1166 67 0 0 chr20 6712640 6712775 -65441107 - AluSq/x SINE Alu -177 135 1 1706 219 145 46 chr20 6712775 6713364 -65440518 + L1ME3A LINE L1 5514 6160 -10 445 240 62 76 chr20 6713373 6713598 -65440284 + MER113 DNA MER1_type? 135 356 -165 2089 123 0 0 chr20 6713760 6714061 -65439821 - AluSx SINE Alu -11 301 1 245 261 0 15 chr20 6714774 6714839 -65439043 - L1ME2 LINE L1 -9 6155 6092 247 162 162 14 chr20 6715592 6715666 -65438216 - MER5A DNA MER1_type -77 112 28 2396 92 3 0 chr20 6715929 6716233 -65437649 - AluSg SINE Alu -5 305 1 486 252 59 15 chr20 6716467 6716602 -65437280 - MIR3 SINE MIR -63 145 5 272 286 10 61 chr20 6718532 6718630 -65435252 - L2 LINE L2 -1 3271 3179 189 200 0 0 chr20 6718636 6718671 -65435211 + MIR SINE MIR 121 155 -107 345 24 0 0 chr20 6719064 6719106 -65434776 + (CA)n Simple_repeat Simple_repeat 1 42 0 1833 102 91 11 chr20 6719110 6719375 -65434507 - AluSc SINE Alu -23 286 1 402 194 14 0 chr20 6719597 6719669 -65434213 - L1ME3A LINE L1 -26 6144 6072 821 209 8 20 chr20 6719750 6719969 -65433913 - L1ME3A LINE L1 -172 6012 5835 1240 163 206 0 chr20 6719976 6720228 -65433654 - AluJo SINE Alu -8 304 1 696 208 15 8 chr20 6720946 6721076 -65432806 + AluJ SINE Alu 3 133 -179 757 40 101 0 chr20 6721088 6721187 -65432695 + L1PA11 LINE L1 6064 6172 -2 1255 134 0 21 chr20 6721192 6721378 -65432504 + AluJ SINE Alu 122 303 -9 259 257 30 40 chr20 6722251 6722352 -65431530 - L1MC4a LINE L1 -1875 5933 5834 520 281 68 51 chr20 6722356 6722591 -65431291 + LTR67 LTR ERVL 23 261 -296 31 0 0 0 chr20 6723507 6723538 -65430344 + AT_rich Low_complexity Low_complexity 1 31 0 350 250 29 10 chr20 6723754 6723858 -65430024 + MLT1H LTR MaLR 50 155 -394 1174 210 36 0 chr20 6723955 6724207 -65429675 + L1MC4a LINE L1 6737 6997 -811 272 244 93 23 chr20 6724248 6724334 -65429548 - MIR SINE MIR -148 114 23 768 254 98 10 chr20 6724384 6724577 -65429305 + MER82 DNA MER2_type 444 653 0 263 219 29 48 chr20 6724579 6724684 -65429198 + HAL1 LINE L1 2333 2435 -72 195 100 0 0 chr20 6725093 6725123 -65428759 + (TGGGGG)n Simple_repeat Simple_repeat 4 33 0 751 252 79 4 chr20 6725192 6725401 -65428481 - MIR SINE MIR -19 243 22 193 338 13 0 chr20 6725572 6725649 -65428233 + L2 LINE L2 2935 3012 -260 261 0 0 0 chr20 6725938 6725967 -65427915 + (T)n Simple_repeat Simple_repeat 1 29 0 600 271 21 2 chr20 6726123 6726307 -65427575 - L1MC4a LINE L1 -436 5685 5515 1364 190 41 14 chr20 6726776 6727066 -65426816 + MLT1C LTR MaLR 1 298 -169 1464 198 100 18 chr20 6727081 6727291 -65426591 - MLT1A1 LTR MaLR 0 365 117 2297 94 3 0 chr20 6727291 6727588 -65426294 - AluSx SINE Alu -14 298 1 1464 198 100 18 chr20 6727588 6727706 -65426176 - MLT1A1 LTR MaLR -248 117 10 402 232 120 16 chr20 6727720 6727845 -65426037 + MLT1C LTR MaLR 318 455 -12 1147 273 54 31 chr20 6728423 6728749 -65425133 + LTR16C LTR ERVL 77 415 -76 2485 117 24 24 chr20 6728749 6729124 -65424758 + THE1C LTR MaLR 1 375 0 1147 273 54 31 chr20 6729124 6729185 -65424697 + LTR16C LTR ERVL 415 473 -18 3365 165 59 50 chr20 6729387 6730061 -65423821 + MER54B LTR ERVL 1 680 -113 539 283 165 31 chr20 6730273 6730595 -65423287 - LTR16A1 LTR ERVL 0 457 93 2507 117 150 91 chr20 6730769 6731040 -65422842 - L1MA5A LINE L1 -5 6292 6038 543 101 13 0 chr20 6731040 6731119 -65422763 + MADE1 DNA Mariner 1 80 0 2507 117 150 91 chr20 6731119 6731421 -65422461 - L1MA5A LINE L1 -259 6038 5685 241 259 0 0 chr20 6731599 6731653 -65422229 - L2 LINE L2 -3 3269 3216 279 377 7 7 chr20 6731795 6731941 -65421941 + (TCCA)n Simple_repeat Simple_repeat 1 146 0 399 237 19 90 chr20 6731991 6732147 -65421735 - L2 LINE L2 0 3313 3169 269 312 110 9 chr20 6732329 6732438 -65421444 + L2 LINE L2 3147 3266 -6 1605 118 24 115 chr20 6732523 6732861 -65421021 + AluYb8 SINE Alu 1 307 -11 1844 169 0 7 chr20 6733247 6733554 -65420328 + AluJb SINE Alu 1 305 -7 255 278 58 58 chr20 6734027 6734232 -65419650 - L1ME4a LINE L1 -83 6038 5834 3522 73 11 5 chr20 6734297 6734738 -65419144 - L1PA8 LINE L1 -1 6171 5728 587 260 18 96 chr20 6735091 6735258 -65418624 - MIR SINE MIR -25 237 89 1550 104 0 0 chr20 6735258 6735469 -65418413 + L1MA2 LINE L1 6094 6304 0 587 260 18 96 chr20 6735469 6735520 -65418362 - MIR SINE MIR -173 89 36 757 179 164 24 chr20 6735799 6736006 -65417876 - MLT1K LTR MaLR -23 565 330 258 289 127 42 chr20 6736071 6736213 -65417669 - MLT1K LTR MaLR -419 169 16 406 182 265 15 chr20 6736237 6736369 -65417513 + MER5A DNA MER1_type 18 182 -7 554 261 111 56 chr20 6736526 6736760 -65417122 + MER115 DNA AcHobo 1 247 -446 1847 151 14 0 chr20 6737728 6738019 -65415863 - AluJb SINE Alu -11 301 7 1350 182 62 140 chr20 6738093 6738257 -65415625 + Charlie4a DNA MER1_type 46 221 -1740 6748 85 30 0 chr20 6738257 6738633 -65415249 - L1PA13 LINE L1 -11 6152 5789 2510 50 0 7 chr20 6738633 6738933 -65414949 - AluY SINE Alu -11 300 3 6748 85 30 0 chr20 6738933 6740006 -65413876 - L1PA13 LINE L1 -374 5789 4697 1350 182 62 140 chr20 6740006 6740300 -65413582 + Charlie4a DNA MER1_type 221 464 -1497 2108 186 80 57 chr20 6740300 6740790 -65413092 + MLT1D LTR MaLR 5 505 0 1350 182 62 140 chr20 6740790 6740830 -65413052 + Charlie4a DNA MER1_type 464 506 -2 1646 229 20 0 chr20 6740904 6741245 -65412637 - MLT1F1 LTR MaLR -8 559 212 411 133 0 0 chr20 6741240 6741300 -65412582 - MLT1F1 LTR MaLR -507 60 1 * 1101 166 0 83 chr20 6741553 6741766 -65412116 - L1MC3 LINE L1 0 7785 7593 1968 134 53 0 chr20 6741766 6742050 -65411832 - AluSx SINE Alu -13 299 1 1101 166 0 83 chr20 6742050 6742077 -65411805 - L1MC3 LINE L1 -192 7593 7565 424 250 62 131 chr20 6742173 6742417 -65411465 + MIR SINE MIR 5 231 -31 4691 169 56 8 chr20 6742724 6743583 -65410299 + MER54A LTR ERVL 2 901 0 2128 137 0 13 chr20 6744294 6744609 -65409273 - AluSq SINE Alu -2 311 1 2097 206 45 13 chr20 6745404 6745632 -65408250 - MER65C LTR ERV1 0 461 242 2881 143 2 25 chr20 6745632 6746074 -65407808 - MSTB1 LTR MaLR 0 432 1 2097 206 45 13 chr20 6746074 6746292 -65407590 - MER65C LTR ERV1 -219 242 1 14589 233 26 17 chr20 6746328 6747729 -65406153 - L1PA16 LINE L1 0 7604 6217 1935 154 57 46 chr20 6747729 6748100 -65405782 - THE1C LTR MaLR 0 375 1 14589 233 26 17 chr20 6748100 6750480 -65403402 - L1PA16 LINE L1 -1387 6217 3806 2260 112 0 7 chr20 6750480 6750785 -65403097 - AluSq SINE Alu -10 303 1 14589 233 26 17 chr20 6750785 6752403 -65401479 - L1PA16 LINE L1 -3798 3806 2204 465 293 28 22 chr20 6752670 6752851 -65401031 - L1PA16 LINE L1 -5276 2298 2117 1357 310 40 28 chr20 6752878 6753455 -65400427 - L1PA16 LINE L1 -6203 1371 788 1726 126 20 0 chr20 6754215 6754470 -65399412 + Tigger5 DNA MER2_type 2063 2322 -1 246 128 0 0 chr20 6754473 6754512 -65399370 + (TG)n Simple_repeat Simple_repeat 2 40 0 2204 206 37 57 chr20 6754518 6754725 -65399157 - L1MCb LINE L1 -4851 1194 984 1859 164 0 3 chr20 6754725 6755017 -65398865 + AluSx SINE Alu 1 291 -21 2204 206 37 57 chr20 6755017 6755784 -65398098 - L1MCb LINE L1 -5061 984 571 955 275 42 70 chr20 6755841 6756267 -65397615 - L1MCb LINE L1 -5444 601 188 1924 133 59 6 chr20 6756267 6756590 -65397292 + L1MA5 LINE L1 5956 6295 -5 10337 216 44 12 chr20 6756632 6758430 -65395452 + L1M4c LINE L1 2053 3975 -2407 186 43 0 0 chr20 6758430 6758453 -65395429 + (CAA)n Simple_repeat Simple_repeat 2 24 0 10337 216 44 12 chr20 6758453 6759431 -65394451 + L1M4c LINE L1 3975 4920 -1462 1163 164 21 0 chr20 6759435 6759624 -65394258 + MSTB LTR MaLR 5 197 -229 185 299 51 56 chr20 6762872 6763069 -65390813 + L3b LINE CR1 1145 1340 -243 1315 136 45 45 chr20 6763559 6763802 -65390080 + MSTB LTR MaLR 184 426 0 5681 174 17 15 chr20 6763802 6764174 -65389708 + L1MA9 LINE L1 4916 5286 -1262 2382 88 0 23 chr20 6764174 6764480 -65389402 + AluSq SINE Alu 1 299 -14 5681 174 17 15 chr20 6764480 6765731 -65388151 + L1MA9 LINE L1 5286 6541 -7 501 244 5 67 chr20 6765906 6766099 -65387783 + HAL1 LINE L1 1979 2159 -348 2335 204 34 28 chr20 6766118 6766617 -65387265 - MLT1F1 LTR MaLR -65 502 1 261 308 10 0 chr20 6766627 6766731 -65387151 + L1ME LINE L1 4232 4336 -1810 1063 272 98 34 chr20 6766822 6767739 -65386143 + L1ME LINE L1 4616 5585 -577 291 381 42 0 chr20 6767851 6768019 -65385863 - L2 LINE L2 -923 2391 2217 1988 123 3 36 chr20 6768274 6768582 -65385300 + AluSx SINE Alu 1 298 -14 21 0 0 0 chr20 6769011 6769032 -65384850 + AT_rich Low_complexity Low_complexity 1 21 0 27191 28 3 0 chr20 6769383 6773207 -65380675 - L1PA2 LINE L1 0 6155 2323 295 287 115 8 chr20 6773462 6773584 -65380298 + MER46C DNA MER2_type 142 276 -62 232 254 45 0 chr20 6773767 6773834 -65380048 - L2 LINE L2 -222 3050 2981 539 256 186 6 chr20 6773986 6774142 -65379740 - MER5A DNA MER1_type 0 189 6 235 233 41 14 chr20 6774142 6774154 -65379728 + MER3 DNA MER1_type 36 49 -160 308 177 25 38 chr20 6774154 6774233 -65379649 - MER3 DNA MER1_type 0 209 132 775 117 0 42 chr20 6774240 6774360 -65379522 + AluSg/x SINE Alu 189 303 -7 592 215 0 0 chr20 6774396 6774503 -65379379 - MER3 DNA MER1_type -93 116 10 1830 189 147 76 chr20 6774634 6775163 -65378719 + MLT1F1 LTR MaLR 1 567 0 684 242 81 10 chr20 6775163 6775361 -65378521 - MIR SINE MIR -43 219 8 354 176 59 209 chr20 6775453 6775521 -65378361 + MER5B DNA MER1_type 17 94 -84 1533 38 0 5 chr20 6775521 6775706 -65378176 + AluY SINE Alu 123 306 -5 354 176 59 209 chr20 6775706 6775824 -65378058 + MER5B DNA MER1_type 94 175 -3 206 281 31 16 chr20 6775873 6775937 -65377945 + MER5A DNA MER1_type 124 188 -1 907 199 11 0 chr20 6776807 6776988 -65376894 - MER5A DNA MER1_type -6 183 1 814 273 27 12 chr20 6777007 6777263 -65376619 + MIR SINE MIR 1 260 -2 3235 159 27 68 chr20 6777425 6778276 -65375606 + LTR1 LTR ERV1 9 785 0 1097 315 54 10 chr20 6779306 6779712 -65374170 + LTR16C LTR ERVL 68 491 0 668 300 76 38 chr20 6780185 6780528 -65373354 - MLT1I LTR MaLR -1 408 53 180 0 0 0 chr20 6780732 6780752 -65373130 + (A)n Simple_repeat Simple_repeat 1 20 0 266 281 123 9 chr20 6781263 6781377 -65372505 - MLT1L LTR MaLR -24 591 465 933 276 87 14 chr20 6781406 6781761 -65372121 - MLT1L LTR MaLR -221 394 14 967 270 98 55 chr20 6781814 6782251 -65371631 - LTR16A1 LTR ERVL -1 456 1 486 0 0 0 chr20 6783228 6783282 -65370600 + (TA)n Simple_repeat Simple_repeat 1 54 0 378 0 0 0 chr20 6783281 6783323 -65370559 + (GA)n Simple_repeat Simple_repeat 2 43 0 * 262 300 12 0 chr20 6783404 6783484 -65370398 + L2 LINE L2 3192 3272 0 3713 72 5 5 chr20 6784878 6785322 -65368560 + MLT2A1 LTR ERVL 1 444 0 610 221 22 7 chr20 6785544 6785680 -65368202 - MER5B DNA MER1_type -16 162 25 198 238 48 16 chr20 6785625 6785688 -65368194 + MER5A DNA MER1_type 109 173 -16 * 203 286 193 8 chr20 6785991 6786110 -65367772 + MER5B DNA MER1_type 3 143 -35 276 247 68 0 chr20 6786970 6787043 -65366839 + HAL1 LINE L1 54 131 -2376 1527 253 150 82 chr20 6787047 6788084 -65365798 + HAL1 LINE L1 432 1539 -968 336 282 0 21 chr20 6788113 6788209 -65365673 + MLT1F1 LTR MaLR 1 94 -466 1002 199 129 48 chr20 6788213 6788305 -65365577 + MLT1A2 LTR MaLR 1 84 -290 1986 153 0 3 chr20 6788305 6788612 -65365270 + AluSx SINE Alu 1 306 -6 1002 199 129 48 chr20 6788612 6788851 -65365031 + MLT1A2 LTR MaLR 84 359 -15 1436 191 83 81 chr20 6788868 6789335 -65364547 + MLT1F1 LTR MaLR 95 562 -5 1209 240 117 80 chr20 6789335 6789808 -65364074 + HAL1 LINE L1 1607 2061 -446 2875 150 26 24 chr20 6789808 6790274 -65363608 - MLT1C LTR MaLR 0 467 1 1209 240 117 80 chr20 6790274 6790505 -65363377 + HAL1 LINE L1 2061 2340 -167 1637 121 4 0 chr20 6790505 6790736 -65363146 + AluSg/x SINE Alu 79 310 0 1209 240 117 80 chr20 6790736 6790751 -65363131 + HAL1 LINE L1 2340 2353 -154 327 141 14 84 chr20 6790751 6790796 -65363086 + LTR67 LTR ERVL 492 532 -25 1621 230 100 66 chr20 6790796 6791327 -65362555 + MLT1H LTR MaLR 1 549 0 327 141 14 84 chr20 6791327 6791352 -65362530 + LTR67 LTR ERVL 532 557 0 2922 3 0 0 chr20 6791842 6792153 -65361729 - AluYa5 SINE Alu 0 311 1 927 172 21 47 chr20 6792680 6792872 -65361010 + LTR41 LTR ERVL 1 187 -586 901 222 48 77 chr20 6793019 6793330 -65360552 + LTR41 LTR ERVL 465 766 -7 963 168 0 19 chr20 6793397 6793558 -65360324 - FRAM SINE Alu -24 152 1 1320 181 112 67 chr20 6793565 6793941 -65359941 + L1ME3A LINE L1 5621 6013 -157 1503 191 109 56 chr20 6793995 6794452 -65359430 + MER66A LTR ERV1 97 478 0 537 215 25 0 chr20 6794477 6794598 -65359284 + L1ME3A LINE L1 6027 6150 -20 31 0 0 0 chr20 6794598 6794629 -65359253 + AT_rich Low_complexity Low_complexity 1 31 0 1269 270 99 13 chr20 6794741 6795134 -65358748 - LTR16B LTR ERVL -4 460 34 1836 82 9 0 chr20 6795189 6795421 -65358461 + L1PA8 LINE L1 5939 6172 0 308 301 88 16 chr20 6795434 6795627 -65358255 + L1MB8 LINE L1 5693 5899 -279 1931 85 0 12 chr20 6795708 6795956 -65357926 + AluY SINE Alu 48 292 -19 1884 142 14 3 chr20 6796159 6796454 -65357428 - AluSx SINE Alu -1 311 14 472 304 88 21 chr20 6796823 6797017 -65356865 + MIR SINE MIR 11 217 -45 250 303 178 46 chr20 6798790 6798942 -65354940 + MIR SINE MIR 18 189 -73 360 0 0 0 chr20 6800199 6800239 -65353643 + (TG)n Simple_repeat Simple_repeat 2 41 0 821 60 30 15 chr20 6800242 6800375 -65353507 + (GAAA)n Simple_repeat Simple_repeat 4 138 0 1285 265 46 88 chr20 6800811 6801438 -65352444 + L1MCb LINE L1 1 601 -5444 2204 206 37 57 chr20 6801495 6802262 -65351620 + L1MCb LINE L1 571 1324 -5061 1859 164 0 3 chr20 6802262 6802554 -65351328 - AluSx SINE Alu -21 291 1 2204 206 37 57 chr20 6802554 6802761 -65351121 + L1MCb LINE L1 1324 1534 -4851 261 83 0 0 chr20 6802767 6802803 -65351079 + (CA)n Simple_repeat Simple_repeat 2 37 0 1726 126 20 0 chr20 6802811 6803066 -65350816 - Tigger5 DNA MER2_type -1 2322 2063 1388 309 40 28 chr20 6803826 6804403 -65349479 + L1PA13 LINE L1 788 1371 -6203 465 293 28 22 chr20 6804430 6804611 -65349271 + L1PA13 LINE L1 2117 2298 -5276 4990 227 44 25 chr20 6804878 6806495 -65347387 + L1PA13 LINE L1 2204 3799 -3785 2223 115 0 7 chr20 6806495 6806799 -65347083 + AluSq SINE Alu 1 302 -11 4990 227 44 25 chr20 6806799 6806934 -65346948 + L1PA13 LINE L1 3799 3930 -3654 867 221 178 98 chr20 6807345 6807435 -65346447 + MLT1F1 LTR MaLR 1 82 -513 2973 6 0 0 chr20 6807435 6807753 -65346129 + AluYb8 SINE Alu 1 318 0 867 221 178 98 chr20 6807753 6808213 -65345669 + MLT1F1 LTR MaLR 82 595 0 592 152 0 11 chr20 6808377 6808469 -65345413 + AluJb SINE Alu 209 299 -13 880 155 0 8 chr20 6808882 6809011 -65344871 - FLAM_A SINE Alu -5 128 1 874 265 76 64 chr20 6809048 6809164 -65344718 + L1ME3 LINE L1 4987 5100 -1062 2173 104 3 0 chr20 6809164 6809452 -65344430 - AluSp SINE Alu -24 289 1 874 265 76 64 chr20 6809452 6809662 -65344220 + L1ME3 LINE L1 5100 5306 -856 1053 185 0 0 chr20 6809662 6809819 -65344063 + FRAM SINE Alu 2 158 -8 874 265 76 64 chr20 6809819 6810135 -65343747 + L1ME3 LINE L1 5306 5657 -505 2262 79 0 0 chr20 6810135 6810415 -65343467 + AluSg SINE Alu 27 306 -4 874 265 76 64 chr20 6810415 6810597 -65343285 + L1ME3 LINE L1 5657 5835 -327 2284 83 7 0 chr20 6811726 6812015 -65341867 - AluSc SINE Alu -18 291 1 1292 139 93 9 chr20 6812363 6812579 -65341303 - MER46A DNA MER2_type 0 236 3 1604 148 112 11 chr20 6813413 6813690 -65340192 + AluSg1 SINE Alu 2 306 -3 2047 117 33 10 chr20 6814039 6814339 -65339543 + AluSc SINE Alu 1 307 -2 701 255 52 14 chr20 6815139 6815351 -65338531 - MIR SINE MIR -29 233 14 2509 64 0 0 chr20 6816333 6816629 -65337253 + AluY SINE Alu 1 296 -15 297 0 0 0 chr20 6816634 6816667 -65337215 + (CA)n Simple_repeat Simple_repeat 1 33 0 325 309 171 6 chr20 6816814 6816989 -65336893 + LTR50 LTR ERVL 16 219 -576 509 245 121 29 chr20 6817091 6817405 -65336477 + LTR33A LTR ERVL 307 507 -16 228 164 0 49 chr20 6818560 6818621 -65335261 + L1MC2 LINE L1 6276 6333 -11 2070 96 17 43 chr20 6820734 6821035 -65332847 - AluSx SINE Alu -19 293 1 752 143 0 9 chr20 6821422 6821534 -65332348 - AluJb SINE Alu -187 125 15 182 36 0 36 chr20 6821955 6821983 -65331899 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 659 200 0 0 chr20 6821985 6822100 -65331782 - AluSg/x SINE Alu -29 280 166 1291 164 24 0 chr20 6822125 6822332 -65331550 - AluJb SINE Alu -100 212 1 273 209 152 29 chr20 6822540 6822645 -65331237 - LTR33 LTR ERVL -38 483 366 422 293 117 46 chr20 6822851 6823090 -65330792 + MIR SINE MIR 1 256 -6 205 306 28 0 chr20 6823874 6823946 -65329936 + MIR SINE MIR 47 120 -88 378 328 66 8 chr20 6824026 6824270 -65329612 + MIR SINE MIR 5 262 0 26 0 0 0 chr20 6824312 6824338 -65329544 + AT_rich Low_complexity Low_complexity 1 26 0 893 272 192 17 chr20 6824445 6825155 -65328727 - L2 LINE L2 -14 3299 2453 27 73 0 0 chr20 6825993 6826048 -65327834 + AT_rich Low_complexity Low_complexity 1 55 0 1489 146 3 128 chr20 6829146 6829489 -65324393 + AluY SINE Alu 2 301 0 1017 245 111 58 chr20 6829792 6830224 -65323658 - LTR16B LTR ERVL 0 464 10 2432 84 3 6 chr20 6830593 6830904 -65322978 - AluSg SINE Alu 0 310 1 724 249 12 12 chr20 6831003 6831168 -65322714 + FRAM SINE Alu 1 165 -1 377 121 0 15 chr20 6831171 6831237 -65322645 + (GGGA)n Simple_repeat Simple_repeat 4 68 0 225 250 0 0 chr20 6832302 6832378 -65321504 + (CATATA)n Simple_repeat Simple_repeat 6 81 0 2175 110 10 0 chr20 6832869 6833170 -65320712 + AluSx SINE Alu 1 304 -8 574 207 32 48 chr20 6833599 6833787 -65320095 - MER5A DNA MER1_type -2 187 3 186 71 0 0 chr20 6834635 6834663 -65319219 + (T)n Simple_repeat Simple_repeat 1 28 0 183 80 0 0 chr20 6834973 6834998 -65318884 + (TTAAA)n Simple_repeat Simple_repeat 2 26 0 2117 117 7 7 chr20 6835007 6835306 -65318576 + AluSx SINE Alu 1 299 -13 1127 179 83 67 chr20 6835370 6835683 -65318199 + MER58B DNA MER1_type 24 341 0 803 236 51 4 chr20 6835818 6836055 -65317827 + L2 LINE L2 1932 2179 -1135 2010 180 42 102 chr20 6836055 6836380 -65317502 - LTR55 LTR ERV -5 543 267 1973 131 0 11 chr20 6836380 6836662 -65317220 - AluJb SINE Alu -8 304 26 2010 180 42 102 chr20 6836662 6836913 -65316969 - LTR55 LTR ERV -281 267 2 1999 245 120 7 chr20 6836914 6837701 -65316181 + L2 LINE L2 2178 3047 -266 2181 105 7 3 chr20 6837810 6838104 -65315778 - AluSq SINE Alu -18 295 1 1496 215 111 14 chr20 6838341 6838765 -65315117 - MLT1C LTR MaLR 0 467 3 210 37 0 0 chr20 6839133 6839160 -65314722 + (TG)n Simple_repeat Simple_repeat 1 27 0 1107 263 27 58 chr20 6839436 6839696 -65314186 - LTR16C LTR ERVL -2 489 245 1965 204 12 46 chr20 6839696 6840177 -65313705 + MLT1C LTR MaLR 1 465 -2 1107 263 27 58 chr20 6840177 6840330 -65313552 - LTR16C LTR ERVL -246 245 89 986 170 131 5 chr20 6840567 6840773 -65313109 + MER34C LTR ERV1 1 232 -353 504 196 65 82 chr20 6842993 6843294 -65310588 + LTR48 LTR ERV1 378 781 -6 422 267 139 0 chr20 6843460 6843632 -65310250 - MIR SINE MIR -6 256 61 1937 153 10 3 chr20 6843650 6843944 -65309938 - AluJb SINE Alu -15 297 2 288 0 0 0 chr20 6843944 6843976 -65309906 + (TC)n Simple_repeat Simple_repeat 2 33 0 * 474 18 0 0 chr20 6843975 6844030 -65309852 + (TA)n Simple_repeat Simple_repeat 1 55 0 1466 120 171 12 chr20 6844037 6844295 -65309587 - AluSg SINE Alu 0 300 2 638 191 191 0 chr20 6845250 6845407 -65308475 + MER5A DNA MER1_type 1 187 -2 588 221 104 12 chr20 6845627 6845790 -65308092 + MER5B DNA MER1_type 1 178 0 231 269 75 54 chr20 6848046 6848139 -65305743 - MIR3 SINE MIR 0 208 114 1072 119 52 174 chr20 6848763 6849108 -65304774 + MER33 DNA MER1_type 22 324 0 1423 188 104 20 chr20 6849398 6849743 -65304139 + MLT1A2 LTR MaLR 1 374 0 725 293 75 14 chr20 6850391 6850671 -65303211 + MER102a DNA MER1_type 2 298 -32 2381 100 0 0 chr20 6851257 6851568 -65302314 - AluY SINE Alu 0 311 1 1479 115 8 47 chr20 6851682 6851916 -65301966 - AluSg/x SINE Alu -4 306 82 2158 102 3 48 chr20 6851927 6852242 -65301640 - AluSq SINE Alu -8 305 5 444 298 60 18 chr20 6852870 6853038 -65300844 - MIR3 SINE MIR -1 207 33 482 214 145 0 chr20 6853950 6854081 -65299801 + L1ME3A LINE L1 6019 6168 -2 2070 109 32 3 chr20 6854086 6854370 -65299512 + AluSg SINE Alu 1 292 -18 29 60 0 0 chr20 6854726 6854776 -65299106 + AT_rich Low_complexity Low_complexity 1 50 0 2322 109 3 6 chr20 6856167 6856479 -65297403 + AluSx SINE Alu 1 311 -1 1076 141 61 5 chr20 6856708 6856906 -65296976 + L1MB7 LINE L1 5976 6184 0 24 32 0 0 chr20 6856929 6856960 -65296922 + AT_rich Low_complexity Low_complexity 1 31 0 228 67 0 0 chr20 6857438 6857468 -65296414 + (CA)n Simple_repeat Simple_repeat 2 31 0 303 128 244 23 chr20 6859958 6860009 -65293873 + L1MC4a LINE L1 7598 7636 -172 645 14 0 0 chr20 6860009 6860083 -65293799 + (TATTG)n Simple_repeat Simple_repeat 2 75 0 303 128 244 23 chr20 6860083 6860117 -65293765 + L1MC4a LINE L1 7636 7702 -106 883 137 8 0 chr20 6860118 6860249 -65293633 + AluSq/x SINE Alu 2 133 -179 375 169 0 0 chr20 6860249 6860320 -65293562 + GA-rich Low_complexity Low_complexity 2 72 0 1152 204 11 8 chr20 6860320 6860580 -65293302 + L1MC4 LINE L1 7782 8042 0 2272 93 3 0 chr20 6861104 6861395 -65292487 - AluY SINE Alu -19 292 1 674 251 24 104 chr20 6861396 6861635 -65292247 - L1M4 LINE L1 -1196 4950 4762 1935 176 0 3 chr20 6861635 6861948 -65291934 - AluJb SINE Alu 0 312 1 674 251 24 104 chr20 6861948 6862158 -65291724 - L1M4 LINE L1 -1384 4762 4537 180 0 0 0 chr20 6862174 6862194 -65291688 + (T)n Simple_repeat Simple_repeat 1 20 0 378 186 14 0 chr20 6862199 6862269 -65291613 - AluJ/FLAM SINE Alu -231 71 1 854 224 103 107 chr20 6862505 6862973 -65290909 - LTR33A LTR ERVL -51 472 7 1658 225 80 40 chr20 6864158 6864717 -65289165 - L1ME2 LINE L1 0 6164 5585 1599 188 26 3 chr20 6864717 6865020 -65288862 - AluJo SINE Alu -1 311 2 1658 225 80 40 chr20 6865020 6865054 -65288828 - L1ME2 LINE L1 -579 5585 5554 243 308 0 0 chr20 6865478 6865543 -65288339 + (CA)n Simple_repeat Simple_repeat 1 65 0 1771 186 0 3 chr20 6866552 6866843 -65287039 - AluJo SINE Alu -22 290 1 183 80 0 0 chr20 6866845 6866870 -65287012 + (TCTCCC)n Simple_repeat Simple_repeat 2 26 0 2336 96 20 0 chr20 6867333 6867635 -65286247 + AluSx SINE Alu 1 308 -4 520 292 53 19 chr20 6869000 6869209 -65284673 + MIR SINE MIR 47 262 0 7546 193 37 39 chr20 6869222 6871942 -65281940 - L1MB7 LINE L1 -7 6177 3464 1571 195 10 20 chr20 6871942 6872239 -65281643 - AluJb SINE Alu -8 304 11 7546 193 37 39 chr20 6872239 6872357 -65281525 - L1MB7 LINE L1 -2720 3464 3347 3240 266 60 18 chr20 6872366 6873655 -65280227 + L2 LINE L2 1942 3286 -27 208 156 0 0 chr20 6873842 6873874 -65280008 - L2 LINE L2 -22 3250 3219 232 309 36 0 chr20 6873933 6874017 -65279865 - L2 LINE L2 -25 3247 3161 564 221 60 70 chr20 6874270 6874469 -65279413 - MER63A DNA MER1_type -13 197 1 1500 212 78 47 chr20 6874610 6874845 -65279037 + MLT1C LTR MaLR 6 232 -235 479 84 127 0 chr20 6874845 6874916 -65278966 + MADE1 DNA Mariner 1 80 0 1500 212 78 47 chr20 6874916 6875128 -65278754 + MLT1C LTR MaLR 232 467 0 377 238 55 93 chr20 6875205 6875361 -65278521 - MIR SINE MIR -12 250 105 2213 103 3 39 chr20 6875361 6875673 -65278209 + AluSq SINE Alu 1 301 -12 377 238 55 93 chr20 6875673 6875765 -65278117 - MIR SINE MIR -157 105 11 631 117 9 81 chr20 6876340 6876451 -65277431 + FRAM SINE Alu 1 101 -75 2698 193 51 69 chr20 6877371 6877767 -65276115 - MER99 DNA DNA -1 827 425 2217 118 0 16 chr20 6877767 6878081 -65275801 + AluSx SINE Alu 1 309 -3 2698 193 51 69 chr20 6878081 6878367 -65275515 - MER99 DNA DNA -403 425 156 2055 129 0 0 chr20 6878367 6878669 -65275213 + AluSx SINE Alu 4 305 -7 2698 193 51 69 chr20 6878669 6878696 -65275186 - MER99 DNA DNA -672 156 130 2341 69 0 33 chr20 6879551 6879884 -65273998 + AluY SINE Alu 1 323 0 1120 115 32 0 chr20 6879884 6880041 -65273841 - U1 snRNA snRNA -3 162 1 998 185 31 70 chr20 6880420 6880647 -65273235 - MER20 DNA MER1_type -1 218 1 1350 50 106 0 chr20 6880954 6881164 -65272718 - AluSg/x SINE Alu 0 311 83 2293 76 28 0 chr20 6882049 6882338 -65271544 - AluSp SINE Alu -14 299 3 1832 244 101 7 chr20 6882428 6882874 -65271008 + LTR16C LTR ERVL 4 491 0 1751 163 3 29 chr20 6883545 6883858 -65270024 + AluJo SINE Alu 2 306 -6 233 322 35 0 chr20 6884010 6884097 -65269785 + LTR67 LTR ERVL 98 187 -370 3741 203 24 47 chr20 6884097 6885089 -65268793 - LTR5 LTR ERVK 0 969 1 322 284 164 0 chr20 6885279 6885395 -65268487 + LTR67 LTR ERVL 418 552 -5 614 220 69 86 chr20 6886183 6886380 -65267502 + L1MC5 LINE L1 7498 7690 -271 1760 154 0 7 chr20 6886380 6886653 -65267229 + AluJb SINE Alu 1 271 -41 614 220 69 86 chr20 6886653 6886746 -65267136 + L1MC5 LINE L1 7690 7783 -178 433 272 88 0 chr20 6886752 6886866 -65267016 + MER5C DNA MER1_type 1 124 -200 183 186 305 0 chr20 6886980 6887039 -65266843 + MER5C DNA MER1_type 248 324 0 342 0 0 0 chr20 6887047 6887085 -65266797 + (CA)n Simple_repeat Simple_repeat 1 38 0 389 223 41 16 chr20 6887085 6887206 -65266676 + L1MC5 LINE L1 7784 7907 -54 220 270 95 32 chr20 6887724 6887850 -65266032 - MIR3 SINE MIR -11 197 64 375 23 0 0 chr20 6888529 6888573 -65265309 + (TG)n Simple_repeat Simple_repeat 1 44 0 1486 154 0 16 chr20 6888573 6888826 -65265056 - AluJb SINE Alu -31 281 33 2179 109 3 10 chr20 6888830 6889133 -65264749 + AluSp SINE Alu 1 301 -12 452 171 0 0 chr20 6889168 6889238 -65264644 - Tigger5 DNA MER2_type -1 2322 2253 302 258 0 0 chr20 6889239 6889305 -65264577 + Tigger5 DNA MER2_type 2252 2317 -6 276 232 145 0 chr20 6889307 6889376 -65264506 - Tigger5 DNA MER2_type -2244 79 1 759 227 7 0 chr20 6889403 6889557 -65264325 - MIR SINE MIR -96 166 12 2739 105 11 6 chr20 6889863 6890225 -65263657 + THE1B LTR MaLR 1 364 0 310 236 14 0 chr20 6890238 6890310 -65263572 + MER116 DNA Mariner 3 75 -5 1567 193 81 122 chr20 6890550 6890930 -65262952 - LTR49 LTR ERV1 0 595 248 1672 200 0 7 chr20 6890930 6891240 -65262642 + AluJo SINE Alu 1 308 -4 1567 193 81 122 chr20 6891240 6891475 -65262407 - LTR49 LTR ERV1 -347 248 5 2375 102 0 6 chr20 6891958 6892272 -65261610 + AluSx SINE Alu 1 312 0 2219 111 3 3 chr20 6892344 6892650 -65261232 + AluSp SINE Alu 6 311 -2 283 215 133 68 chr20 6892669 6892867 -65261015 + MLT1F LTR MaLR 1 256 -293 1177 197 80 11 chr20 6893016 6893290 -65260592 - L1MD2 LINE L1 -2 6357 6065 880 249 0 10 chr20 6893364 6893557 -65260325 - AluJb SINE Alu -2 310 120 2533 208 91 77 chr20 6893570 6894339 -65259543 - L1MDa LINE L1 -2990 3550 2738 1513 167 15 23 chr20 6894339 6894651 -65259231 - AluJo SINE Alu 0 330 21 2533 208 91 77 chr20 6894651 6895158 -65258724 - L1MDa LINE L1 -3802 2738 2240 1996 207 76 41 chr20 6895171 6895543 -65258339 - MER21B LTR ERV1 -1 862 466 1941 124 48 3 chr20 6895543 6895833 -65258049 + AluSx SINE Alu 1 303 -9 1996 207 76 41 chr20 6895833 6895972 -65257910 - MER21B LTR ERV1 -397 466 333 2158 134 0 3 chr20 6896140 6896453 -65257429 - AluSx SINE Alu 0 312 1 258 301 62 62 chr20 6896469 6896645 -65257237 + HAL1 LINE L1 2309 2484 -23 1690 178 11 3 chr20 6896743 6897029 -65256853 + AluJo SINE Alu 1 288 -24 2059 134 3 0 chr20 6897330 6897620 -65256262 - AluSx SINE Alu -21 291 1 23 0 0 0 chr20 6898033 6898056 -65255826 + AT_rich Low_complexity Low_complexity 1 23 0 560 224 29 0 chr20 6898226 6898400 -65255482 + CT-rich Low_complexity Low_complexity 1 179 0 226 161 18 18 chr20 6898417 6898473 -65255409 + CT-rich Low_complexity Low_complexity 4 59 0 672 278 110 63 chr20 6898559 6899580 -65254302 - L1M4 LINE L1 -2018 4128 2934 3204 116 12 0 chr20 6899580 6900003 -65253879 - MSTA LTR MaLR 0 428 1 672 278 110 63 chr20 6900003 6900591 -65253291 - L1M4 LINE L1 -3212 2934 2375 6229 206 2 4 chr20 6900609 6901884 -65251998 + L1 LINE L1 3863 5135 -1011 772 226 66 67 chr20 6902401 6902755 -65251127 + HAL1 LINE L1 1112 1539 -968 336 282 0 21 chr20 6902784 6902880 -65251002 + MLT1F1 LTR MaLR 1 94 -466 1002 199 129 48 chr20 6902884 6902976 -65250906 + MLT1A2 LTR MaLR 1 84 -290 1986 153 0 3 chr20 6902976 6903283 -65250599 + AluSx SINE Alu 1 306 -6 1002 199 129 48 chr20 6903283 6903522 -65250360 + MLT1A2 LTR MaLR 84 359 -15 1436 191 83 81 chr20 6903539 6904006 -65249876 + MLT1F1 LTR MaLR 95 562 -5 1197 243 119 75 chr20 6904006 6904479 -65249403 + HAL1 LINE L1 1607 2123 -384 2875 150 26 24 chr20 6904479 6904945 -65248937 - MLT1C LTR MaLR 0 467 1 1197 243 119 75 chr20 6904945 6905176 -65248706 + HAL1 LINE L1 2123 2342 -165 1716 76 5 0 chr20 6905176 6905386 -65248496 + AluSg/x SINE Alu 81 291 -21 2190 206 32 63 chr20 6905388 6906153 -65247729 - L1MCb LINE L1 -4851 1194 571 1285 265 46 88 chr20 6906210 6906837 -65247045 - L1MCb LINE L1 -5444 601 1 821 60 30 15 chr20 6907273 6907406 -65246476 + (TTTC)n Simple_repeat Simple_repeat 4 138 0 360 0 0 0 chr20 6907409 6907449 -65246433 + (CA)n Simple_repeat Simple_repeat 2 41 0 250 303 178 46 chr20 6908706 6908858 -65245024 - MIR SINE MIR -73 189 18 474 335 77 10 chr20 6910631 6910825 -65243057 - MIR SINE MIR -45 217 11 1884 142 14 3 chr20 6911195 6911490 -65242392 + AluSx SINE Alu 14 311 -1 1931 85 0 12 chr20 6911693 6911941 -65241941 - AluY SINE Alu -19 292 48 308 301 88 16 chr20 6912022 6912215 -65241667 - L1MB8 LINE L1 -279 5899 5693 1836 82 9 0 chr20 6912228 6912460 -65241422 - L1PA8 LINE L1 0 6172 5939 1269 270 99 13 chr20 6912515 6912908 -65240974 + LTR16B LTR ERVL 34 460 -4 31 0 0 0 chr20 6913020 6913051 -65240831 + AT_rich Low_complexity Low_complexity 1 31 0 537 215 25 0 chr20 6913051 6913172 -65240710 - L1ME3A LINE L1 -20 6150 6027 1503 191 109 56 chr20 6913197 6913654 -65240228 - MER66A LTR ERV1 0 478 97 1320 181 112 67 chr20 6913708 6914084 -65239798 - L1ME3A LINE L1 -157 6013 5621 917 169 6 19 chr20 6914091 6914251 -65239631 + FRAM SINE Alu 1 152 -24 868 210 64 78 chr20 6914308 6914627 -65239255 - LTR41 LTR ERVL 0 766 457 909 183 21 42 chr20 6914776 6914967 -65238915 - LTR41 LTR ERVL -586 187 1 2883 3 0 0 chr20 6915494 6915805 -65238077 + AluYa5 SINE Alu 1 311 0 189 159 0 0 chr20 6916219 6916263 -65237619 + A-rich Low_complexity Low_complexity 1 44 0 220 165 0 51 chr20 6916290 6916369 -65237513 + GA-rich Low_complexity Low_complexity 3 77 0 206 224 20 0 chr20 6916390 6916439 -65237443 + G-rich Low_complexity Low_complexity 4 53 0 4970 150 23 8 chr20 6918640 6919647 -65234235 + L1PA16 LINE L1 5128 6150 -16 303 329 29 22 chr20 6919680 6919817 -65234065 - L1M4c LINE L1 -3798 2584 2447 358 258 114 3 chr20 6920297 6920530 -65233352 - L1M4c LINE L1 -4653 1910 1536 769 325 133 25 chr20 6920560 6920755 -65233127 - L2 LINE L2 -1888 1426 1254 2371 93 0 10 chr20 6920755 6921065 -65232817 + AluSx SINE Alu 1 307 -5 769 325 133 25 chr20 6921065 6921163 -65232719 - L2 LINE L2 -2060 1254 1168 1544 206 62 37 chr20 6921163 6921595 -65232287 - LTR47B LTR ERVL 0 443 1 769 325 133 25 chr20 6921595 6921789 -65232093 - L2 LINE L2 -2146 1168 885 884 58 15 2 chr20 6921789 6921923 -65231959 + L1HS LINE L1 5990 6154 0 450 128 0 0 chr20 6922569 6922628 -65231254 + (GA)n Simple_repeat Simple_repeat 2 63 -16 387 0 0 0 chr20 6922628 6922671 -65231211 + (TG)n Simple_repeat Simple_repeat 1 43 0 450 128 0 0 chr20 6922671 6922689 -65231193 + (GA)n Simple_repeat Simple_repeat 62 79 0 622 190 165 6 chr20 6922745 6922903 -65230979 + MER54B LTR ERVL 1 183 -610 683 194 8 21 chr20 6923008 6923256 -65230626 + GA-rich Low_complexity Low_complexity 1 244 0 275 200 0 0 chr20 6923311 6923371 -65230511 - MLT1F1 LTR MaLR -8 559 500 704 342 39 24 chr20 6923375 6923787 -65230095 + L1MA9 LINE L1 177 594 -5719 9250 227 60 35 chr20 6924492 6925726 -65228156 + L1MA9 LINE L1 912 2114 -4268 2609 62 0 0 chr20 6925726 6926035 -65227847 + AluY SINE Alu 1 309 -2 9250 227 60 35 chr20 6926035 6926065 -65227817 + L1MA9 LINE L1 2114 2142 -4240 2073 138 49 3 chr20 6926065 6926435 -65227447 + L1MA5 LINE L1 5909 6295 -5 9250 227 60 35 chr20 6926435 6928275 -65225607 + L1MA9 LINE L1 2142 3968 -2414 186 43 0 0 chr20 6928275 6928298 -65225584 + (CAA)n Simple_repeat Simple_repeat 2 24 0 9250 227 60 35 chr20 6928298 6929276 -65224606 + L1MA9 LINE L1 3968 4920 -1462 1083 164 21 0 chr20 6929280 6929469 -65224413 + MSTB LTR MaLR 5 197 -229 210 299 51 56 chr20 6932717 6932914 -65220968 + L3b LINE CR1 1145 1340 -243 1210 136 45 45 chr20 6933404 6933647 -65220235 + MSTB LTR MaLR 184 426 0 5175 175 17 15 chr20 6933647 6934019 -65219863 + L1MA9 LINE L1 4916 5286 -1262 2388 88 0 23 chr20 6934019 6934325 -65219557 + AluSq SINE Alu 1 299 -14 5175 175 17 15 chr20 6934325 6935576 -65218306 + L1MA9 LINE L1 5286 6541 -7 456 231 6 58 chr20 6935785 6935941 -65217941 + HAL1 LINE L1 2009 2156 -351 2129 206 34 28 chr20 6935963 6936462 -65217420 - MLT1F1 LTR MaLR -65 502 1 352 326 38 0 chr20 6936472 6936604 -65217278 + L1ME LINE L1 4232 4368 -1778 784 269 101 36 chr20 6936667 6937584 -65216298 + L1ME LINE L1 4616 5585 -577 297 381 42 0 chr20 6937696 6937864 -65216018 - L2 LINE L2 -923 2391 2217 1994 123 3 36 chr20 6938119 6938427 -65215455 + AluSx SINE Alu 1 298 -14 21 0 0 0 chr20 6938856 6938877 -65215005 + AT_rich Low_complexity Low_complexity 1 21 0 25466 28 3 0 chr20 6939228 6943052 -65210830 - L1PA2 LINE L1 0 6155 2323 247 287 115 8 chr20 6943307 6943429 -65210453 + MER46C DNA MER2_type 142 276 -62 255 298 154 0 chr20 6943612 6943716 -65210166 - L2 LINE L2 -222 3050 2931 549 256 186 6 chr20 6943831 6943987 -65209895 - MER5A DNA MER1_type 0 189 6 285 164 18 0 chr20 6943999 6944054 -65209828 - MER3 DNA MER1_type 0 209 154 723 117 0 42 chr20 6944085 6944205 -65209677 + AluSg/x SINE Alu 189 303 -7 545 215 0 0 chr20 6944241 6944348 -65209534 - MER3 DNA MER1_type -93 116 10 1624 192 165 34 chr20 6944479 6945008 -65208874 + MLT1F1 LTR MaLR 1 542 0 697 242 81 10 chr20 6945008 6945206 -65208676 - MIR SINE MIR -43 219 8 352 176 59 209 chr20 6945298 6945366 -65208516 + MER5B DNA MER1_type 17 94 -84 1518 38 0 5 chr20 6945366 6945551 -65208331 + AluY SINE Alu 123 306 -5 352 176 59 209 chr20 6945551 6945669 -65208213 + MER5B DNA MER1_type 94 175 -3 212 281 31 16 chr20 6945718 6945782 -65208100 + MER5A DNA MER1_type 124 188 -1 902 209 11 0 chr20 6946646 6946833 -65207049 - MER5A DNA MER1_type 0 189 1 709 285 23 8 chr20 6946852 6947108 -65206774 + MIR SINE MIR 1 260 -2 2987 165 26 66 chr20 6947270 6948121 -65205761 + LTR1 LTR ERV1 9 785 0 972 315 54 10 chr20 6949151 6949557 -65204325 + LTR16C LTR ERVL 68 491 0 561 300 76 38 chr20 6950030 6950373 -65203509 - MLT1I LTR MaLR -1 408 53 180 0 0 0 chr20 6950577 6950597 -65203285 + (A)n Simple_repeat Simple_repeat 1 20 0 805 279 87 14 chr20 6951251 6951606 -65202276 - MLT1L LTR MaLR -221 394 14 279 285 157 17 chr20 6951659 6951831 -65202051 - LTR16A1 LTR ERVL -1 456 261 1937 186 53 3 chr20 6952025 6952402 -65201480 + MER54B LTR ERVL 103 498 -295 225 83 0 0 chr20 6952404 6952440 -65201442 + (CA)n Simple_repeat Simple_repeat 2 37 0 1033 269 44 16 chr20 6952991 6953419 -65200463 - L1MC3 LINE L1 -1639 6382 5943 258 272 126 49 chr20 6953479 6953949 -65199933 - L1MC3 LINE L1 -1567 4815 4310 6530 21 1 0 chr20 6954001 6954792 -65199090 - L1PA4 LINE L1 -3 6152 5361 1072 21 28 0 chr20 6954795 6954937 -65198945 + L1PA4 LINE L1 5213 5358 -788 603 270 150 46 chr20 6955012 6955638 -65198244 - HAL1 LINE L1 -1816 691 1 450 268 95 30 chr20 6955703 6955986 -65197896 - L1MC3 LINE L1 -3917 2467 2169 1607 102 9 4 chr20 6955991 6956762 -65197120 + L1PB1 LINE L1 5285 6151 0 2130 104 0 46 chr20 6956892 6957218 -65196664 - AluY SINE Alu 0 311 1 203 0 0 36 chr20 6957297 6957325 -65196557 + (TTA)n Simple_repeat Simple_repeat 2 28 0 369 334 135 32 chr20 6957349 6957690 -65196192 - HAL1b LINE L1 -646 1765 327 1675 200 3 22 chr20 6957707 6958022 -65195860 - AluJb SINE Alu -1 311 3 408 329 109 42 chr20 6958083 6958631 -65195251 - L1MC3 LINE L1 -4864 1508 924 1080 128 0 16 chr20 6960940 6961128 -65192754 + MER53 DNA DNA 4 188 -1 877 209 6 0 chr20 6961932 6962109 -65191773 + MER5B DNA MER1_type 1 178 0 197 255 39 20 chr20 6962367 6962418 -65191464 - L2 LINE L2 -254 3059 3008 842 239 0 16 chr20 6962445 6962629 -65191253 + MER5A DNA MER1_type 1 181 -8 1722 169 10 22 chr20 6962909 6963223 -65190659 - AluSx SINE Alu 0 312 3 642 276 24 84 chr20 6963849 6964228 -65189654 + MLT1G3 LTR MaLR 9 300 -230 201 200 0 40 chr20 6964442 6964492 -65189390 + GA-rich Low_complexity Low_complexity 4 51 0 257 82 27 82 chr20 6965610 6965720 -65188162 + (CCCCCA)n Simple_repeat Simple_repeat 4 107 0 217 239 45 0 chr20 6965772 6965860 -65188022 + (CAAA)n Simple_repeat Simple_repeat 2 93 0 204 200 18 18 chr20 6965897 6965952 -65187930 + (CCAA)n Simple_repeat Simple_repeat 2 56 0 747 92 0 0 chr20 6965952 6966061 -65187821 + (TTCC)n Simple_repeat Simple_repeat 2 110 0 1281 160 5 0 chr20 6966061 6966267 -65187615 - AluJo SINE Alu -38 274 68 267 162 73 29 chr20 6966549 6966617 -65187265 - MLT1H LTR MaLR -25 524 454 1348 231 175 19 chr20 6966669 6967155 -65186727 + MLT1G1 LTR MaLR 22 583 -12 242 259 102 37 chr20 6967355 6967463 -65186419 - MLT1G1 LTR MaLR -465 130 16 353 326 0 0 chr20 6967479 6967571 -65186311 + L2 LINE L2 3185 3276 -37 298 329 134 51 chr20 6967633 6967925 -65185957 + L2 LINE L2 2933 3248 -24 414 246 22 43 chr20 6968178 6968316 -65185566 + MIR SINE MIR 127 261 -1 1839 163 0 11 chr20 6968676 6968958 -65184924 + AluJo SINE Alu 12 290 -22 1100 167 28 32 chr20 6969931 6970147 -65183735 + MER20 DNA MER1_type 5 219 0 1904 151 17 3 chr20 6972215 6972506 -65181376 - AluJb SINE Alu -15 297 3 798 274 134 8 chr20 6972653 6973025 -65180857 + LTR16C LTR ERVL 73 491 0 292 391 75 11 chr20 6973053 6973319 -65180563 + L2 LINE L2 2470 2752 -562 682 99 57 7 chr20 6973452 6973593 -65180289 + CT-rich Low_complexity Low_complexity 4 151 0 4507 138 33 14 chr20 6973593 6974420 -65179462 - L1MA8 LINE L1 -172 6119 5278 25 0 0 0 chr20 6975093 6975118 -65178764 + AT_rich Low_complexity Low_complexity 1 25 0 603 272 61 10 chr20 6976230 6976444 -65177438 - MIR SINE MIR -2 260 40 821 214 0 18 chr20 6976676 6976844 -65177038 - FRAM SINE Alu -14 162 1 5301 57 6 6 chr20 6976844 6977524 -65176358 - L1PA7 LINE L1 0 6154 5475 839 142 0 0 chr20 6977541 6977661 -65176221 - FLAM_C SINE Alu -13 120 1 928 216 22 0 chr20 6978150 6978331 -65175551 - MER5A DNA MER1_type -4 185 1 888 260 114 6 chr20 6978602 6978952 -65174930 + LTR33A LTR ERVL 61 448 -75 1054 172 25 0 chr20 6979004 6979202 -65174680 + MER3 DNA MER1_type 7 209 0 273 75 0 0 chr20 6979626 6979666 -65174216 + (CA)n Simple_repeat Simple_repeat 2 41 0 2404 165 14 58 chr20 6979709 6980046 -65173836 - L1MCa LINE L1 -3848 2590 2265 2196 117 7 3 chr20 6980046 6980354 -65173528 - AluSg SINE Alu -1 309 1 2404 165 14 58 chr20 6980354 6980570 -65173312 - L1MCa LINE L1 -4173 2265 2041 2110 142 31 36 chr20 6980607 6980924 -65172958 + Tigger2 DNA MER2_type 2334 2650 -68 2179 112 7 0 chr20 6980924 6981218 -65172664 + AluSx SINE Alu 1 296 -16 2110 142 31 36 chr20 6981218 6981287 -65172595 + Tigger2 DNA MER2_type 2650 2718 0 1552 127 43 49 chr20 6981288 6981911 -65171971 - L1MCa LINE L1 -4383 2043 1328 2474 126 48 10 chr20 6981919 6982331 -65171551 + MSTA LTR MaLR 1 428 0 2315 215 13 13 chr20 6982396 6982930 -65170952 - MER74A LTR ERVL -24 534 1 490 248 28 0 chr20 6983765 6983874 -65170008 + MIR SINE MIR 80 191 -71 189 0 0 0 chr20 6984016 6984037 -65169845 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 1233 258 122 0 chr20 6984528 6984947 -65168935 + L1ME2 LINE L1 5686 6155 -9 425 91 0 0 chr20 6984990 6985056 -65168826 - L1P5 LINE L1 -631 5525 5460 1066 186 0 10 chr20 6985056 6985258 -65168624 + L1PA16 LINE L1 5964 6165 -1 219 36 0 0 chr20 6985265 6985293 -65168589 + (CCAA)n Simple_repeat Simple_repeat 4 31 0 1065 150 20 36 chr20 6986645 6986892 -65166990 + L1MA4 LINE L1 6055 6297 -3 894 83 35 0 chr20 6986898 6987043 -65166839 - L1P5 LINE L1 -679 5477 5328 629 191 57 0 chr20 6987227 6987384 -65166498 - L1 LINE L1 -795 5351 5186 3703 130 30 0 chr20 6987384 6987990 -65165892 + L1PB4 LINE L1 5532 6156 0 1087 206 14 106 chr20 6988280 6988713 -65165169 - LTR16A1 LTR ERVL -10 447 55 292 185 200 0 chr20 6989112 6989177 -65164705 + L2 LINE L2 3195 3272 0 350 46 62 0 chr20 6991068 6991133 -65162749 + (TCTA)n Simple_repeat Simple_repeat 1 69 0 252 345 74 20 chr20 6991737 6991885 -65161997 - L3b LINE CR1 -205 1378 1223 368 317 8 24 chr20 6992277 6992400 -65161482 + MIR3 SINE MIR 75 195 -13 259 382 53 0 chr20 6992554 6992685 -65161197 + MIR3 SINE MIR 30 167 -41 1680 189 19 73 chr20 6993104 6993517 -65160365 + MSTD LTR MaLR 6 396 0 827 229 17 6 chr20 6993763 6993938 -65159944 - MER45A DNA AcHobo -1 177 1 2819 7 0 0 chr20 6994076 6994382 -65159500 - AluYa5 SINE Alu -5 306 1 1738 154 89 31 chr20 6994718 6995243 -65158639 + MLT2A2 LTR ERVL 1 554 0 2332 251 93 15 chr20 6996331 6997183 -65156699 + L1MC4 LINE L1 7125 8042 0 442 146 101 0 chr20 6998933 6999022 -65154860 - MLT2C2 LTR ERVL -364 100 3 492 99 0 0 chr20 6999067 6999138 -65154744 + (TA)n Simple_repeat Simple_repeat 2 72 0 621 111 0 0 chr20 6999173 6999263 -65154619 - MLT2C2 LTR ERVL -374 90 1 489 336 24 45 chr20 6999748 7000037 -65153845 - L2 LINE L2 -25 3288 3006 282 330 39 39 chr20 7000267 7000449 -65153433 - L3b LINE CR1 -131 1452 1271 1493 122 9 5 chr20 7000460 7000674 -65153208 + AluSp SINE Alu 86 300 -13 22 0 0 0 chr20 7001606 7001628 -65152254 + AT_rich Low_complexity Low_complexity 1 22 0 1077 151 26 0 chr20 7001758 7001950 -65151932 + L1PA13 LINE L1 5946 6142 -21 2071 136 25 14 chr20 7002397 7002757 -65151125 + MSTB LTR MaLR 6 369 -57 576 293 61 0 chr20 7002967 7003148 -65150734 + MIR SINE MIR 45 236 -26 185 26 0 0 chr20 7003365 7003592 -65150290 + AT_rich Low_complexity Low_complexity 1 227 0 283 279 79 21 chr20 7004131 7004271 -65149611 + MLT1J2 LTR MaLR 17 164 -286 294 157 57 14 chr20 7004437 7004507 -65149375 + MLT1I LTR MaLR 331 403 -6 198 0 0 0 chr20 7005879 7005901 -65147981 + (T)n Simple_repeat Simple_repeat 1 22 0 22 56 0 0 chr20 7005979 7006015 -65147867 + AT_rich Low_complexity Low_complexity 1 36 0 543 286 75 36 chr20 7007090 7007342 -65146540 - MER115 DNA AcHobo -72 621 360 2364 195 33 0 chr20 7007489 7007941 -65145941 - MLT1C LTR MaLR 0 467 1 437 303 8 0 chr20 7007956 7008078 -65145804 - MER115 DNA AcHobo -546 147 25 243 0 0 0 chr20 7008900 7008927 -65144955 + (CAAAAA)n Simple_repeat Simple_repeat 2 28 0 1786 145 10 46 chr20 7011236 7011539 -65142343 - AluJo SINE Alu -16 296 5 259 162 0 19 chr20 7012195 7012349 -65141533 + AluJo SINE Alu 46 281 -21 24 0 0 0 chr20 7012484 7012508 -65141374 + AT_rich Low_complexity Low_complexity 1 24 0 27 49 0 0 chr20 7012688 7012729 -65141153 + AT_rich Low_complexity Low_complexity 1 41 0 1693 139 78 12 chr20 7012729 7013060 -65140822 - L1MA9 LINE L1 -1 6311 5959 267 225 0 0 chr20 7013262 7013333 -65140549 + (TATATG)n Simple_repeat Simple_repeat 2 72 0 194 193 35 35 chr20 7013890 7013947 -65139935 - MER5A DNA MER1_type -120 69 13 250 294 143 0 chr20 7013966 7014078 -65139804 + MIR SINE MIR 34 159 -62 428 189 0 0 chr20 7014223 7014313 -65139569 + L1MA8 LINE L1 6197 6286 -5 24 0 0 0 chr20 7015463 7015487 -65138395 + AT_rich Low_complexity Low_complexity 1 24 0 332 304 108 18 chr20 7015555 7016089 -65137793 + L1MDa LINE L1 1268 1948 -4773 2241 100 0 13 chr20 7016089 7016388 -65137494 - AluSx SINE Alu -17 295 1 332 304 108 18 chr20 7016388 7016568 -65137314 + L1MDa LINE L1 1948 2110 -4611 4415 178 57 6 chr20 7016654 7017474 -65136408 - MER21B LTR ERV1 -1 862 1 351 261 146 12 chr20 7017625 7017790 -65136092 - L2 LINE L2 -1814 1500 1314 2177 113 54 41 chr20 7017817 7018208 -65135674 + MER57A LTR ERV1 8 403 0 264 331 70 86 chr20 7018884 7019141 -65134741 + L2 LINE L2 3018 3270 -2 1149 190 71 6 chr20 7019272 7019625 -65134257 - Charlie5 DNA MER1_type 0 2620 2245 401 153 24 0 chr20 7019647 7019732 -65134150 - Charlie5 DNA MER1_type -2495 117 31 6071 184 27 8 chr20 7020447 7022539 -65131343 + L1MB1 LINE L1 4001 6132 -36 774 190 0 0 chr20 7022636 7022824 -65131058 - FLAM_C SINE Alu 0 189 2 664 214 38 25 chr20 7022824 7023042 -65130840 - L1MC/D LINE L1 -534 5636 5429 227 91 0 0 chr20 7023148 7023181 -65130701 + L1 LINE L1 4913 4945 -1201 371 59 0 0 chr20 7023202 7023253 -65130629 + MADE1 DNA Mariner 29 79 -1 943 288 47 23 chr20 7024558 7025036 -65128846 - MLT1G3 LTR MaLR 0 595 21 1057 220 34 11 chr20 7025260 7025524 -65128358 - MLT1H1 LTR MaLR 0 555 286 642 239 48 6 chr20 7025591 7025758 -65128124 - MLT1H1 LTR MaLR -419 176 3 195 42 0 0 chr20 7026081 7026105 -65127777 + (TCCA)n Simple_repeat Simple_repeat 2 25 0 379 276 43 9 chr20 7026110 7026226 -65127656 - L2 LINE L2 -1 3312 3193 846 208 6 6 chr20 7026985 7027158 -65126724 - L1PB3 LINE L1 0 6154 5982 771 268 105 28 chr20 7027271 7027700 -65126182 - L1ME4a LINE L1 -44 6077 5616 988 181 9 37 chr20 7028766 7028981 -65124901 - MER3 DNA MER1_type 0 209 1 465 298 133 9 chr20 7029081 7029261 -65124621 - MIR SINE MIR 0 262 70 2131 95 0 0 chr20 7029609 7029872 -65124010 + AluSx SINE Alu 29 291 -21 245 185 74 12 chr20 7030083 7030164 -65123718 - L1MA9 LINE L1 -5 6307 6222 * 3588 144 16 15 chr20 7030133 7030798 -65123084 - L1MA7 LINE L1 -91 6200 5535 202 109 65 0 chr20 7032125 7032171 -65121711 + (TA)n Simple_repeat Simple_repeat 2 50 0 256 347 70 19 chr20 7032224 7032495 -65121387 + L3 LINE CR1 1090 1374 -203 184 286 36 0 chr20 7032577 7032633 -65121249 + MIR3 SINE MIR 151 208 0 515 291 65 4 chr20 7033388 7033618 -65120264 + LTR16A LTR ERVL 18 261 -189 386 268 46 26 chr20 7033860 7034013 -65119869 - MIR SINE MIR 0 262 107 489 32 0 0 chr20 7034407 7034469 -65119413 - L1PA16 LINE L1 -314 5852 5791 2348 128 16 13 chr20 7035752 7036134 -65117748 - L1PA15 LINE L1 0 6165 5783 539 253 175 62 chr20 7036230 7036602 -65117280 - LTR33A LTR ERVL -9 514 101 22 70 0 0 chr20 7037986 7038029 -65115853 + AT_rich Low_complexity Low_complexity 1 43 0 23 0 0 0 chr20 7039025 7039048 -65114834 + AT_rich Low_complexity Low_complexity 1 23 0 28 29 0 0 chr20 7039327 7039362 -65114520 + AT_rich Low_complexity Low_complexity 1 35 0 279 275 29 0 chr20 7039612 7039681 -65114201 + polypyrimidine Low_complexity Low_complexity 5 75 0 1477 212 26 0 chr20 7040293 7040600 -65113282 - MLT1H LTR MaLR -226 323 9 3547 142 32 18 chr20 7041258 7041943 -65111939 - L1MA7 LINE L1 -51 6240 5546 1604 184 7 39 chr20 7042264 7042574 -65111308 - AluJo SINE Alu -12 300 1 1869 299 116 8 chr20 7043070 7043929 -65109953 - L2 LINE L2 -138 3175 2224 6622 202 18 4 chr20 7043948 7045746 -65108136 + L1PA15-16 LINE L1 12 1383 -5466 17941 59 11 1 chr20 7045846 7048387 -65105495 - L1P4 LINE L1 -699 5464 2898 872 216 0 6 chr20 7048616 7048792 -65105090 - L1PB3 LINE L1 0 6154 5980 771 268 105 28 chr20 7048905 7049334 -65104548 - L1ME4a LINE L1 -44 6077 5616 988 181 9 37 chr20 7050400 7050615 -65103267 - MER3 DNA MER1_type 0 209 1 465 298 133 9 chr20 7050715 7050895 -65102987 - MIR SINE MIR 0 262 70 2131 95 0 0 chr20 7051243 7051506 -65102376 + AluSx SINE Alu 29 291 -21 245 185 74 12 chr20 7051717 7051798 -65102084 - L1MA9 LINE L1 -5 6307 6222 * 3588 144 16 15 chr20 7051767 7052432 -65101450 - L1MA7 LINE L1 -91 6200 5535 202 109 65 0 chr20 7053757 7053803 -65100079 + (TA)n Simple_repeat Simple_repeat 2 50 0 256 347 70 19 chr20 7053856 7054127 -65099755 + L3 LINE CR1 1090 1374 -203 184 286 36 0 chr20 7054209 7054265 -65099617 + MIR3 SINE MIR 151 208 0 515 291 65 4 chr20 7055019 7055249 -65098633 + LTR16A LTR ERVL 18 261 -189 386 268 46 26 chr20 7055491 7055644 -65098238 - MIR SINE MIR 0 262 107 465 48 0 0 chr20 7056038 7056100 -65097782 - L1PA16 LINE L1 -314 5852 5791 539 253 175 62 chr20 7056205 7056577 -65097305 - LTR33A LTR ERVL -9 514 101 22 70 0 0 chr20 7057961 7058004 -65095878 + AT_rich Low_complexity Low_complexity 1 43 0 23 0 0 0 chr20 7059000 7059023 -65094859 + AT_rich Low_complexity Low_complexity 1 23 0 28 29 0 0 chr20 7059302 7059337 -65094545 + AT_rich Low_complexity Low_complexity 1 35 0 279 275 29 0 chr20 7059587 7059656 -65094226 + polypyrimidine Low_complexity Low_complexity 5 75 0 1477 212 26 0 chr20 7060268 7060575 -65093307 - MLT1H LTR MaLR -226 323 9 1050 128 53 11 chr20 7061465 7061673 -65092209 - Tigger2 DNA MER2_type -199 2519 8 2415 127 6 54 chr20 7061682 7061898 -65091984 + L1MCa LINE L1 2041 2266 -4160 2196 117 7 3 chr20 7061898 7062206 -65091676 + AluSg SINE Alu 1 309 -1 2415 127 6 54 chr20 7062206 7062544 -65091338 + L1MCa LINE L1 2266 2578 -3848 273 75 0 0 chr20 7062587 7062627 -65091255 + (TG)n Simple_repeat Simple_repeat 2 41 0 1054 172 25 0 chr20 7063051 7063249 -65090633 - MER3 DNA MER1_type 0 209 7 888 260 114 6 chr20 7063301 7063651 -65090231 - LTR33A LTR ERVL -75 448 61 928 216 22 0 chr20 7063922 7064103 -65089779 + MER5A DNA MER1_type 1 185 -4 1994 123 3 36 chr20 7064592 7064900 -65088982 + AluSx SINE Alu 1 298 -14 21 0 0 0 chr20 7065329 7065350 -65088532 + AT_rich Low_complexity Low_complexity 1 21 0 11070 41 6 4 chr20 7065701 7069523 -65084359 - L1PA2 LINE L1 0 6155 2323 247 287 115 8 chr20 7069778 7069900 -65083982 + MER46C DNA MER2_type 142 276 -62 224 261 43 0 chr20 7070083 7070152 -65083730 - L2 LINE L2 -222 3050 2979 3352 91 11 0 chr20 7070427 7071051 -65082831 - L1PB1 LINE L1 -143 6008 5285 448 266 95 31 chr20 7071056 7071340 -65082542 + L1M4c LINE L1 2169 2467 -3917 402 278 158 53 chr20 7071405 7072030 -65081852 + HAL1 LINE L1 1 691 -1816 1072 21 28 0 chr20 7072105 7072247 -65081635 - L1PA4 LINE L1 -788 5358 5213 6630 30 0 1 chr20 7072250 7073040 -65080842 + L1PA4 LINE L1 5361 6149 -6 2196 130 0 0 chr20 7174632 7174940 -64978942 + AluSx SINE Alu 1 308 -4 500 152 10 0 chr20 7174940 7175039 -64978843 + GA-rich Low_complexity Low_complexity 1 100 0 1774 231 25 35 chr20 7175851 7176198 -64977684 - L1M4 LINE L1 -492 5686 5337 1862 89 0 63 chr20 7176198 7176469 -64977413 - AluSq SINE Alu -16 297 44 1774 231 25 35 chr20 7176469 7176866 -64977016 - L1M4 LINE L1 -841 5337 4934 399 313 0 17 chr20 7177059 7177238 -64976644 + (TA)n Simple_repeat Simple_repeat 2 177 0 180 0 0 0 chr20 7178221 7178241 -64975641 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 258 32 0 0 chr20 7178610 7178641 -64975241 + (TAAA)n Simple_repeat Simple_repeat 4 34 0 949 229 17 21 chr20 7178750 7178986 -64974896 - MSTB LTR MaLR -191 235 1 1062 323 25 12 chr20 7179059 7179510 -64974372 - L2 LINE L2 -225 3088 2630 3006 207 71 36 chr20 7180116 7181361 -64972521 - L1MD2 LINE L1 -312 6047 4768 531 215 0 0 chr20 7181367 7181460 -64972422 + AluJ/FLAM SINE Alu 1 93 -219 2159 136 7 0 chr20 7182142 7182452 -64971430 + MER1B DNA MER1_type 28 339 0 180 125 0 0 chr20 7182883 7182915 -64970967 + (TG)n Simple_repeat Simple_repeat 2 33 0 2283 113 3 0 chr20 7184072 7184374 -64969508 - AluSq SINE Alu -8 305 3 2015 259 68 8 chr20 7184377 7184980 -64968902 - L1ME3A LINE L1 -36 6134 5496 229 266 59 65 chr20 7185080 7185249 -64968633 + L2 LINE L2 3143 3310 -3 216 292 45 22 chr20 7185811 7185900 -64967982 - MIR SINE MIR -55 207 117 2031 132 58 21 chr20 7185926 7186251 -64967631 + MER1B DNA MER1_type 1 337 0 203 146 24 0 chr20 7186323 7186364 -64967518 + GA-rich Low_complexity Low_complexity 1 42 0 207 300 71 14 chr20 7186543 7186613 -64967269 - MIR SINE MIR -97 111 38 23 62 0 0 chr20 7187488 7187520 -64966362 + AT_rich Low_complexity Low_complexity 1 32 0 368 282 64 68 chr20 7188685 7188951 -64964931 + LTR33 LTR ERVL 24 288 -233 423 259 167 17 chr20 7189751 7189925 -64963957 - MIR SINE MIR -5 257 58 6642 44 19 6 chr20 7190355 7191143 -64962739 + L1PA7 LINE L1 5353 6150 -4 209 57 29 0 chr20 7192560 7192595 -64961287 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 342 0 0 0 chr20 7193032 7193070 -64960812 + (TG)n Simple_repeat Simple_repeat 2 39 0 827 269 31 18 chr20 7194570 7194793 -64959089 + MIR SINE MIR 1 226 -36 212 175 0 0 chr20 7195077 7195117 -64958765 + T-rich Low_complexity Low_complexity 4 43 0 1641 183 20 0 chr20 7196711 7197012 -64956870 - AluSx SINE Alu -5 307 1 383 305 90 75 chr20 7197589 7197910 -64955972 + L3 LINE CR1 1178 1503 -74 239 322 52 26 chr20 7198361 7198476 -64955406 + L3 LINE CR1 1349 1466 -111 364 196 0 0 chr20 7198667 7198723 -64955159 + Alu SINE Alu 1 56 -246 820 123 31 15 chr20 7198723 7198853 -64955029 + AluJo/FRAM SINE Alu 167 298 -14 205 315 210 28 chr20 7199599 7199742 -64954140 - MIR SINE MIR -88 174 6 396 72 43 0 chr20 7201070 7201139 -64952743 + CT-rich Low_complexity Low_complexity 1 72 0 1876 156 0 20 chr20 7201244 7201546 -64952336 - AluJb SINE Alu -16 296 1 6842 68 0 0 chr20 7201591 7202444 -64951438 - L1PA6 LINE L1 0 6154 5302 1998 97 0 0 chr20 7202442 7202731 -64951151 + L1PA6 LINE L1 5014 5302 -844 * 362 324 200 0 chr20 7203417 7203562 -64950320 + MER5A DNA MER1_type 16 189 0 363 235 25 0 chr20 7204848 7204929 -64948953 + MER5A DNA MER1_type 106 188 -1 798 265 127 4 chr20 7205898 7206158 -64947724 - MLT1G1 LTR MaLR -19 576 285 668 231 27 41 chr20 7206158 7206305 -64947577 - AluJo SINE Alu -57 255 111 1172 241 44 0 chr20 7206305 7206575 -64947307 - MLT1G1 LTR MaLR -312 283 2 610 309 39 5 chr20 7206741 7206945 -64946937 - MIR SINE MIR -18 244 34 240 161 0 0 chr20 7206994 7207056 -64946826 + A-rich Low_complexity Low_complexity 1 62 0 243 239 0 0 chr20 7207302 7207369 -64946513 + (TA)n Simple_repeat Simple_repeat 2 68 0 540 167 12 0 chr20 7207395 7207479 -64946403 - AluJ/FLAM SINE Alu -222 90 6 2224 102 3 0 chr20 7207602 7207896 -64945986 - AluSx SINE Alu -17 295 1 192 231 0 77 chr20 7208095 7208147 -64945735 - L2 LINE L2 0 3272 3225 224 332 169 31 chr20 7209696 7210151 -64943731 - L2 LINE L2 -2331 983 466 638 344 57 0 chr20 7210424 7210671 -64943211 + MIR SINE MIR 1 261 -1 21 36 0 0 chr20 7210938 7210966 -64942916 + AT_rich Low_complexity Low_complexity 1 28 0 325 296 44 48 chr20 7211244 7211538 -64942344 + HAL1b LINE L1 178 470 -878 382 292 24 56 chr20 7211803 7211877 -64942005 + HAL1b LINE L1 670 745 -603 1903 140 9 22 chr20 7211877 7212192 -64941690 + AluJb SINE Alu 1 311 -1 382 292 24 56 chr20 7212192 7212367 -64941515 + HAL1b LINE L1 745 911 -437 267 303 26 0 chr20 7212393 7212469 -64941413 - L2 LINE L2 0 3313 3236 935 227 15 0 chr20 7212469 7212667 -64941215 + MER6B DNA MER2_type 3 203 -7 278 254 92 28 chr20 7213232 7213374 -64940508 + L1MC/D LINE L1 5278 5428 -2380 2403 73 3 3 chr20 7213386 7213689 -64940193 + AluY SINE Alu 1 303 -8 249 258 150 72 chr20 7213824 7213991 -64939891 + L1MC/D LINE L1 5602 5781 -2027 408 275 63 28 chr20 7214128 7214270 -64939612 - MIR SINE MIR -108 154 8 339 309 114 30 chr20 7214433 7214747 -64939135 - LTR33 LTR ERVL -11 510 119 2000 214 189 6 chr20 7214753 7215282 -64938600 - MLT1E1 LTR MaLR 0 654 29 216 0 0 0 chr20 7215749 7215773 -64938109 + (CAAAAA)n Simple_repeat Simple_repeat 2 25 0 1772 30 0 0 chr20 7216857 7217054 -64936828 - L1PA5 LINE L1 0 6154 5958 348 264 56 32 chr20 7217539 7217664 -64936218 + MER94 DNA DNA 7 134 0 669 275 48 24 chr20 7219008 7219259 -64934623 - MIR SINE MIR 0 262 6 359 327 44 13 chr20 7219306 7219465 -64934417 + L1MC2 LINE L1 5483 5646 -475 275 205 60 24 chr20 7219519 7219602 -64934280 + L1MC2 LINE L1 5746 5831 -1977 1759 143 22 35 chr20 7219688 7220002 -64933880 + L1MC2 LINE L1 6026 6335 -9 213 94 0 0 chr20 7220637 7220669 -64933213 + (CAAT)n Simple_repeat Simple_repeat 3 34 0 187 171 29 0 chr20 7222226 7222261 -64931621 - MER5A DNA MER1_type -118 71 36 886 177 27 11 chr20 7222601 7222787 -64931095 + MER5A DNA MER1_type 1 189 0 459 282 16 0 chr20 7222983 7223107 -64930775 + MER94 DNA DNA 1 126 -8 680 131 16 8 chr20 7223420 7223542 -64930340 + MER65A LTR ERV1 323 445 0 1810 177 7 3 chr20 7224635 7224929 -64928953 + AluJb SINE Alu 1 295 -17 2498 171 29 17 chr20 7225263 7225741 -64928141 + L1PA15 LINE L1 5678 6161 -4 29 28 0 0 chr20 7226135 7226171 -64927711 + AT_rich Low_complexity Low_complexity 1 36 0 707 235 112 32 chr20 7226171 7226675 -64927207 - MLT1G1 LTR MaLR 0 585 5 4246 119 3 0 chr20 7226771 7227402 -64926480 + MER41B LTR ERV1 3 635 0 2045 125 30 0 chr20 7227518 7227814 -64926068 - AluSx SINE Alu -7 305 1 306 255 265 51 chr20 7228466 7228618 -64925264 - L2 LINE L2 -540 2774 2656 2148 122 10 0 chr20 7228618 7228914 -64924968 + AluSx SINE Alu 1 299 -13 306 255 265 51 chr20 7228914 7228957 -64924925 - L2 LINE L2 -658 2656 2537 246 236 396 0 chr20 7229093 7229199 -64924683 - MER5A DNA MER1_type -1 188 41 253 254 39 54 chr20 7230155 7230285 -64923597 - MLT1L LTR MaLR -445 170 43 515 292 103 5 chr20 7230536 7230721 -64923161 - L2 LINE L2 -535 2779 2577 743 239 114 30 chr20 7230723 7231049 -64922833 + MLT1F1 LTR MaLR 1 365 -202 384 295 40 46 chr20 7231055 7231141 -64922741 - L2 LINE L2 -1002 2312 2227 1399 249 0 10 chr20 7231141 7231454 -64922428 + AluJo SINE Alu 1 310 -2 384 295 40 46 chr20 7231454 7231540 -64922342 - L2 LINE L2 -1087 2227 2141 185 0 0 39 chr20 7231541 7231567 -64922315 + (TGAA)n Simple_repeat Simple_repeat 4 28 0 243 79 0 0 chr20 7233046 7233084 -64920798 + (TTTG)n Simple_repeat Simple_repeat 3 40 0 728 324 122 17 chr20 7234023 7234539 -64919343 + L2 LINE L2 2754 3311 -2 821 237 49 5 chr20 7235203 7235427 -64918455 + L1ME1 LINE L1 5928 6161 -5 2112 92 4 0 chr20 7235446 7235719 -64918163 + AluSp SINE Alu 37 310 -3 550 255 7 7 chr20 7237963 7238108 -64915774 + MER117 DNA MER1_type 1 145 -52 332 178 148 10 chr20 7239020 7239121 -64914761 - MLT1F1 LTR MaLR -17 550 436 262 306 0 20 chr20 7239282 7239380 -64914502 - MLT1H LTR MaLR -362 187 92 231 267 0 0 chr20 7239907 7239952 -64913930 - MIR SINE MIR -131 77 33 244 308 17 8 chr20 7240148 7240268 -64913614 + L1M4b LINE L1 92 212 -6647 373 336 112 20 chr20 7240526 7240821 -64913061 + L1M4b LINE L1 862 1183 -5672 1779 247 56 79 chr20 7240893 7241279 -64912603 + L1M4b LINE L1 1190 1583 -5376 2061 119 58 0 chr20 7241279 7241574 -64912308 + AluSx SINE Alu 1 312 0 1779 247 56 79 chr20 7241574 7242416 -64911466 + L1M4b LINE L1 1583 2393 -4566 249 196 0 0 chr20 7242607 7242663 -64911219 + (TG)n Simple_repeat Simple_repeat 2 57 0 367 163 12 25 chr20 7242815 7242895 -64910987 + L1M4 LINE L1 4561 4639 -1507 931 266 177 2 chr20 7243835 7244248 -64909634 - LTR33A LTR ERVL -10 513 29 779 234 8 98 chr20 7245017 7245282 -64908600 - MIR SINE MIR -21 241 1 767 256 79 4 chr20 7245292 7245519 -64908363 - MLT1G LTR MaLR -335 255 12 297 0 0 0 chr20 7245997 7246030 -64907852 + (TG)n Simple_repeat Simple_repeat 1 33 0 1802 129 4 0 chr20 7247249 7247505 -64906377 - AluSx SINE Alu -12 300 44 2401 89 0 3 chr20 7248980 7249284 -64904598 + AluSq SINE Alu 1 303 -10 530 313 30 5 chr20 7250601 7250799 -64903083 + MIR SINE MIR 22 224 -38 515 342 77 62 chr20 7250997 7251057 -64902825 - L2 LINE L2 0 3272 3214 2080 141 0 7 chr20 7251057 7251361 -64902521 - AluSx SINE Alu -10 302 1 515 342 77 62 chr20 7251361 7251794 -64902088 - L2 LINE L2 -58 3214 2794 4529 172 21 11 chr20 7252081 7252652 -64901230 - L1MB3 LINE L1 -1 6182 5618 2445 37 0 7 chr20 7252652 7252947 -64900935 - AluY SINE Alu -18 293 1 4529 172 21 11 chr20 7252947 7253597 -64900285 - L1MB3 LINE L1 -565 5618 4944 1443 224 78 28 chr20 7253606 7254079 -64899803 + L1MB8 LINE L1 5680 6176 -2 249 33 0 0 chr20 7254161 7254191 -64899691 + (TG)n Simple_repeat Simple_repeat 1 30 0 546 278 74 0 chr20 7255958 7256134 -64897748 - MER5A DNA MER1_type 0 189 1 249 253 35 0 chr20 7256178 7256265 -64897617 - L1ME LINE L1 -316 5805 5716 460 310 150 9 chr20 7256293 7256506 -64897376 - MIR SINE MIR 0 262 20 653 214 26 0 chr20 7256642 7256796 -64897086 + MER45A DNA AcHobo 21 178 0 22 0 0 0 chr20 7257159 7257181 -64896701 + AT_rich Low_complexity Low_complexity 1 22 0 1303 124 5 25 chr20 7257188 7257424 -64896458 - AluSg/x SINE Alu 0 312 96 1631 138 112 35 chr20 7257559 7257907 -64895975 + THE1C LTR MaLR 1 375 0 250 192 13 13 chr20 7258292 7258370 -64895512 + CT-rich Low_complexity Low_complexity 3 80 0 485 304 30 38 chr20 7259482 7259719 -64894163 + L2 LINE L2 2855 3089 -183 906 286 191 0 chr20 7259971 7260349 -64893533 - LTR16C LTR ERVL -8 483 34 186 368 23 35 chr20 7261125 7261212 -64892670 + MIR SINE MIR 6 91 -171 476 279 107 17 chr20 7261599 7261832 -64892050 + MLT1J2 LTR MaLR 67 320 -130 248 158 18 0 chr20 7262622 7262679 -64891203 + CT-rich Low_complexity Low_complexity 1 58 0 2291 219 56 37 chr20 7264249 7264949 -64888933 - L1ME3A LINE L1 -38 6132 5420 257 299 239 27 chr20 7265456 7265640 -64888242 + MIR SINE MIR 19 241 -21 189 200 0 22 chr20 7265611 7265656 -64888226 + L2 LINE L2 3258 3301 -12 * 22 0 0 0 chr20 7266502 7266524 -64887358 + AT_rich Low_complexity Low_complexity 1 22 0 204 318 101 18 chr20 7266695 7266863 -64887019 - MIR SINE MIR -62 146 9 331 325 48 42 chr20 7266943 7267109 -64886773 - L3 LINE CR1 -35 1542 1376 701 211 10 98 chr20 7267163 7267367 -64886515 - MER63A DNA MER1_type -24 186 1 286 293 43 9 chr20 7267367 7267483 -64886399 - L3 LINE CR1 -237 1340 1221 188 397 0 0 chr20 7267501 7267569 -64886313 + MIR SINE MIR 47 114 -148 417 313 19 38 chr20 7267685 7267845 -64886037 + L2 LINE L2 3156 3312 -1 207 347 20 31 chr20 7267873 7267971 -64885911 + MIR3 SINE MIR 98 194 -14 282 276 141 29 chr20 7268018 7268188 -64885694 + MIR SINE MIR 22 210 -52 1696 190 3 23 chr20 7268574 7268879 -64885003 - AluJo SINE Alu -13 299 1 216 261 0 0 chr20 7269217 7269263 -64884619 + CT-rich Low_complexity Low_complexity 2 47 0 2020 120 13 27 chr20 7269757 7270057 -64883825 + AluSx SINE Alu 1 296 -16 181 227 45 0 chr20 7270332 7270376 -64883506 + L2 LINE L2 3268 3313 0 354 270 230 14 chr20 7270640 7270788 -64883094 - MER5A DNA MER1_type -6 183 4 239 331 101 14 chr20 7271903 7272051 -64881831 + MIR3 SINE MIR 44 204 -4 21 0 0 0 chr20 7272230 7272251 -64881631 + AT_rich Low_complexity Low_complexity 1 21 0 312 263 120 87 chr20 7272917 7273366 -64880516 + MLT1J LTR MaLR 6 469 -42 2217 120 73 15 chr20 7274093 7274435 -64879447 - THE1B LTR MaLR -2 362 1 364 321 28 0 chr20 7274598 7274704 -64879178 + L2 LINE L2 3197 3305 -8 2249 171 44 2 chr20 7276862 7277271 -64876611 + MSTB LTR MaLR 1 426 0 2984 210 101 36 chr20 7277787 7279267 -64874615 + L1MDa LINE L1 16 1897 -4643 2470 214 26 14 chr20 7279302 7280020 -64873862 + L1M4 LINE L1 4017 4743 -1403 352 219 0 0 chr20 7280073 7280137 -64873745 - FLAM SINE Alu -12 121 58 1232 306 130 43 chr20 7280263 7281191 -64872691 + L2 LINE L2 1618 2626 -688 1156 193 227 102 chr20 7281192 7281257 -64872625 - MLT1E1 LTR MaLR 0 654 599 2118 132 0 13 chr20 7281257 7281560 -64872322 - AluSx SINE Alu -13 299 1 1156 193 227 102 chr20 7281560 7282075 -64871807 - MLT1E1 LTR MaLR -55 599 1 262 300 149 49 chr20 7282075 7282466 -64871416 + L2 LINE L2 2623 3062 -210 1180 229 26 17 chr20 7283652 7283954 -64869928 - MER65C LTR ERV1 -154 307 3 1870 210 99 38 chr20 7283967 7284501 -64869381 + MLT1F1 LTR MaLR 1 567 0 360 339 22 17 chr20 7284558 7284749 -64869133 - MIR SINE MIR -56 206 17 1490 164 16 6 chr20 7284956 7285267 -64868615 - MER33 DNA MER1_type -5 319 6 237 65 0 0 chr20 7286190 7286221 -64867661 + (TTTC)n Simple_repeat Simple_repeat 3 33 0 2456 51 0 26 chr20 7286874 7287186 -64866696 + AluY SINE Alu 1 304 -7 2398 64 0 20 chr20 7288185 7288482 -64865400 + AluY SINE Alu 1 291 -20 225 254 0 0 chr20 7288524 7288595 -64865287 + (TA)n Simple_repeat Simple_repeat 1 71 0 207 0 0 0 chr20 7289589 7289612 -64864270 + (T)n Simple_repeat Simple_repeat 1 23 0 324 120 0 0 chr20 7289931 7289981 -64863901 + (TG)n Simple_repeat Simple_repeat 2 51 0 237 331 32 35 chr20 7292259 7292415 -64861467 - MIR SINE MIR -34 228 68 286 237 43 21 chr20 7294313 7294406 -64859476 + LTR33 LTR ERVL 413 507 -14 1564 201 62 0 chr20 7294536 7294824 -64859058 + AluJb SINE Alu 2 307 -5 667 213 128 11 chr20 7294937 7295125 -64858757 - MER63A DNA MER1_type 0 210 1 423 301 82 10 chr20 7295183 7295379 -64858503 - LTR16C LTR ERVL -2 489 280 358 307 11 0 chr20 7296296 7296384 -64857498 - L2 LINE L2 -2 3311 3223 2500 90 0 0 chr20 7296713 7297024 -64856858 + AluSx SINE Alu 1 311 -1 22 35 0 0 chr20 7297407 7297436 -64856446 + AT_rich Low_complexity Low_complexity 1 29 0 274 230 160 0 chr20 7297740 7297840 -64856042 + L1MC4 LINE L1 7926 8041 -1 383 278 71 10 chr20 7298797 7298995 -64854887 - L1ME LINE L1 -354 5767 5558 354 267 41 56 chr20 7299023 7299218 -64854664 - L1ME LINE L1 -2495 5500 5309 892 169 111 5 chr20 7301667 7301856 -64852026 + MER3 DNA MER1_type 1 209 0 4837 141 25 11 chr20 7302515 7303459 -64850423 - L1PB4 LINE L1 0 6156 5197 294 355 95 30 chr20 7303834 7304130 -64849752 - L2 LINE L2 -774 2540 2226 183 308 28 137 chr20 7304435 7304646 -64849236 + L2 LINE L2 2994 3181 -91 503 309 91 9 chr20 7304715 7304925 -64848957 + MLT1H LTR MaLR 125 351 -198 189 333 0 30 chr20 7305022 7305088 -64848794 + L2 LINE L2 3245 3308 -5 248 333 77 44 chr20 7305897 7306080 -64847802 - MIR3 SINE MIR -17 191 3 899 221 97 47 chr20 7306248 7306621 -64847261 - MER57A LTR ERV1 0 403 1 1183 234 40 27 chr20 7306621 7306992 -64846890 - L1MD3 LINE L1 -157 7838 7463 24 32 0 0 chr20 7307110 7307141 -64846741 + AT_rich Low_complexity Low_complexity 1 31 0 1239 120 6 0 chr20 7307141 7307308 -64846574 - AluSx SINE Alu -140 172 5 235 326 26 26 chr20 7308799 7308913 -64844969 + MIR SINE MIR 42 154 -73 1163 170 21 59 chr20 7309799 7309864 -64844018 - MLT1C LTR MaLR 0 467 401 2828 13 0 0 chr20 7309864 7310175 -64843707 - AluYa5 SINE Alu 0 311 1 1163 170 21 59 chr20 7310175 7310397 -64843485 - MLT1C LTR MaLR -66 401 191 486 33 0 0 chr20 7310399 7310459 -64843423 + (TAGA)n Simple_repeat Simple_repeat 3 62 0 200 364 45 0 chr20 7310477 7310587 -64843295 - L3 LINE CR1 -62 1515 1401 697 298 44 32 chr20 7311270 7311585 -64842297 + MLT1I LTR MaLR 72 390 -19 307 329 17 68 chr20 7311652 7311889 -64841993 + L2 LINE L2 2305 2529 -785 * 514 323 57 68 chr20 7311886 7312356 -64841526 - L2 LINE L2 -1 3271 2807 541 316 104 4 chr20 7312472 7312703 -64841179 - MIR SINE MIR -3 259 6 258 336 60 0 chr20 7312883 7313017 -64840865 - L2 LINE L2 -836 2478 2337 387 0 0 0 chr20 7314541 7314584 -64839298 + (TG)n Simple_repeat Simple_repeat 1 43 0 222 156 0 0 chr20 7315626 7315671 -64838211 + CT-rich Low_complexity Low_complexity 2 46 0 333 245 238 7 chr20 7315936 7316079 -64837803 - MER5A DNA MER1_type -1 188 13 26 0 0 0 chr20 7316480 7316506 -64837376 + AT_rich Low_complexity Low_complexity 1 26 0 382 61 30 30 chr20 7316795 7316861 -64837021 + (TTTC)n Simple_repeat Simple_repeat 3 68 0 180 0 0 0 chr20 7319932 7319952 -64833930 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1978 158 3 3 chr20 7320312 7320623 -64833259 + AluSx SINE Alu 1 311 -1 519 246 87 0 chr20 7320674 7320800 -64833082 + MIR SINE MIR 72 208 -54 260 217 72 14 chr20 7321660 7321729 -64832153 - MER116 DNA Mariner -5 75 3 373 279 137 12 chr20 7322611 7322772 -64831110 + MER5A DNA MER1_type 9 189 0 22 35 0 0 chr20 7323400 7323429 -64830453 + AT_rich Low_complexity Low_complexity 1 29 0 198 71 0 0 chr20 7325172 7325200 -64828682 + (TA)n Simple_repeat Simple_repeat 2 29 0 21 57 0 0 chr20 7327474 7327509 -64826373 + AT_rich Low_complexity Low_complexity 1 35 0 261 0 0 0 chr20 7328382 7328411 -64825471 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 486 228 25 122 chr20 7328619 7328816 -64825066 - MER5A DNA MER1_type -8 181 4 183 42 0 0 chr20 7429730 7429754 -64724128 + (CAAA)n Simple_repeat Simple_repeat 3 26 0 733 174 8 0 chr20 7429800 7429932 -64723950 + FLAM_C SINE Alu 1 133 0 33 66 0 0 chr20 7430616 7430677 -64723205 + AT_rich Low_complexity Low_complexity 1 61 0 1364 137 49 4 chr20 7431024 7431250 -64722632 + MER46A DNA MER2_type 1 236 0 214 229 34 8 chr20 7431273 7431391 -64722491 + (TA)n Simple_repeat Simple_repeat 2 122 0 533 292 123 42 chr20 7431666 7432067 -64721815 + MLT1J LTR MaLR 1 441 -70 1957 167 0 0 chr20 7432067 7432366 -64721516 + AluJb SINE Alu 1 299 -13 533 292 123 42 chr20 7432366 7432395 -64721487 + MLT1J LTR MaLR 441 466 -45 592 263 126 10 chr20 7433523 7433721 -64720161 + MIR SINE MIR 20 240 -22 22 0 0 0 chr20 7433848 7433870 -64720012 + AT_rich Low_complexity Low_complexity 1 22 0 274 242 0 0 chr20 7434388 7434454 -64719428 - LTR16C LTR ERVL 0 491 426 315 0 0 0 chr20 7435012 7435047 -64718835 + (CA)n Simple_repeat Simple_repeat 1 35 0 711 253 192 47 chr20 7435481 7435987 -64717895 + MLT1G LTR MaLR 12 590 0 804 311 60 24 chr20 7436980 7437360 -64716522 - LTR16C LTR ERVL -13 478 85 555 225 12 23 chr20 7438197 7438458 -64715424 + CT-rich Low_complexity Low_complexity 1 257 0 549 333 26 4 chr20 7438702 7438933 -64714949 + MIR SINE MIR 1 236 -26 1281 50 0 0 chr20 7439240 7439401 -64714481 - L1PA4 LINE L1 -3 6152 5992 595 198 117 41 chr20 7439670 7439867 -64714015 + MLT1H LTR MaLR 86 297 -252 486 223 11 69 chr20 7439902 7440068 -64713814 + MLT1H LTR MaLR 392 542 0 411 268 10 0 chr20 7440638 7440735 -64713147 - L2 LINE L2 -6 3266 3169 337 297 71 32 chr20 7441739 7441894 -64711988 - L2 LINE L2 -2 3270 3110 522 196 0 0 chr20 7441908 7442005 -64711877 + MER5A DNA MER1_type 88 184 -5 240 35 0 0 chr20 7442157 7442186 -64711696 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 24 0 0 0 chr20 7442332 7442356 -64711526 + AT_rich Low_complexity Low_complexity 1 24 0 512 316 73 9 chr20 7442560 7442778 -64711104 - LTR16A LTR ERVL -12 438 207 385 298 85 48 chr20 7443583 7443771 -64710111 - MIR3 SINE MIR -5 203 9 1366 264 180 5 chr20 7443787 7444348 -64709534 + MLT2F LTR ERVL 1 659 -4 747 230 86 19 chr20 7444559 7444768 -64709114 - MIR SINE MIR 0 262 40 312 324 22 7 chr20 7444979 7445118 -64708764 - MER117 DNA MER1_type -36 161 21 380 188 152 25 chr20 7445816 7446064 -64707818 + MLT1H LTR MaLR 207 536 -13 240 196 0 0 chr20 7446876 7446922 -64706960 - LTR16A1 LTR ERVL -167 290 245 285 343 21 7 chr20 7447055 7447198 -64706684 - LTR16A1 LTR ERVL -305 152 8 363 237 51 0 chr20 7448034 7448152 -64705730 - L1ME2 LINE L1 -1 6163 6040 430 195 0 2 chr20 7448154 7448250 -64705632 + L1M4 LINE L1 5469 5563 -611 * 1758 144 164 15 chr20 7448244 7448647 -64705235 + L1PA16 LINE L1 5703 6165 -1 856 204 23 42 chr20 7448671 7448935 -64704947 - L1ME2 LINE L1 -114 6050 5792 206 288 100 12 chr20 7450117 7450197 -64703685 + MIR3 SINE MIR 119 205 -3 21 36 0 0 chr20 7450304 7450332 -64703550 + AT_rich Low_complexity Low_complexity 1 28 0 26 0 0 0 chr20 7450408 7450434 -64703448 + AT_rich Low_complexity Low_complexity 1 26 0 659 226 60 93 chr20 7450469 7450606 -64703276 + MIR SINE MIR 21 148 -114 2315 98 0 7 chr20 7450606 7450913 -64702969 - AluSx SINE Alu -7 305 1 659 226 60 93 chr20 7450913 7451023 -64702859 + MIR SINE MIR 148 260 -2 2307 89 0 3 chr20 7451294 7451608 -64702274 - AluSx SINE Alu 0 312 1 310 379 33 0 chr20 7452602 7452755 -64701127 - MIR SINE MIR -17 245 88 642 187 120 0 chr20 7454395 7454545 -64699337 + MIR SINE MIR 92 259 -3 630 345 37 34 chr20 7454621 7455001 -64698881 + L3 LINE CR1 1180 1560 -17 21 0 0 0 chr20 7456381 7456402 -64697480 + AT_rich Low_complexity Low_complexity 1 21 0 30 0 0 0 chr20 7456509 7456539 -64697343 + AT_rich Low_complexity Low_complexity 1 30 0 828 325 13 0 chr20 7457146 7457383 -64696499 - MIR SINE MIR -11 251 12 238 292 0 0 chr20 7457450 7457522 -64696360 - L1ME2 LINE L1 -448 5673 5602 328 248 50 59 chr20 7458446 7458547 -64695335 - L2 LINE L2 -17 3255 3156 1026 32 0 0 chr20 7458580 7458706 -64695176 + L1PA4 LINE L1 6030 6155 0 545 303 126 39 chr20 7458816 7459228 -64694654 + MLT1H LTR MaLR 2 449 -100 577 327 71 40 chr20 7459398 7459820 -64694062 - L2 LINE L2 -744 2570 2136 195 100 0 0 chr20 7459824 7459854 -64694028 + (TG)n Simple_repeat Simple_repeat 1 30 0 222 37 0 0 chr20 7460197 7460224 -64693658 + (TGAA)n Simple_repeat Simple_repeat 3 29 0 1790 117 4 0 chr20 7460538 7460778 -64693104 + AluSp SINE Alu 59 299 -14 274 264 0 14 chr20 7460784 7460856 -64693026 - L2 LINE L2 -333 2980 2910 2361 110 0 0 chr20 7462403 7462712 -64691170 + AluSc SINE Alu 1 309 0 1623 145 30 7 chr20 7463706 7463975 -64689907 - AluSx SINE Alu -37 275 1 24 32 0 0 chr20 7465522 7465553 -64688329 + AT_rich Low_complexity Low_complexity 1 31 0 22 35 0 0 chr20 7466286 7466315 -64687567 + AT_rich Low_complexity Low_complexity 1 29 0 187 367 0 0 chr20 7466579 7466639 -64687243 + L2 LINE L2 3240 3299 -14 2184 182 36 19 chr20 7466892 7467310 -64686572 + MSTB LTR MaLR 2 426 0 300 272 328 0 chr20 7467556 7467681 -64686201 - MER5A DNA MER1_type -7 182 17 * 360 352 31 0 chr20 7467669 7467797 -64686085 - MER5B DNA MER1_type -45 133 2 275 349 171 7 chr20 7468053 7468199 -64685683 + MER5A DNA MER1_type 14 183 -6 338 208 65 0 chr20 7468761 7468838 -64685044 + MER5A DNA MER1_type 25 106 -83 361 269 48 10 chr20 7469247 7469351 -64684531 + MIR SINE MIR 74 181 -81 666 205 0 0 chr20 7469378 7469500 -64684382 - FLAM_A SINE Alu -11 122 1 375 41 0 0 chr20 7469755 7469804 -64684078 + (TG)n Simple_repeat Simple_repeat 1 49 0 638 298 178 24 chr20 7470215 7470677 -64683205 + L2 LINE L2 2784 3312 -1 619 295 141 27 chr20 7471611 7471981 -64681901 + MLT1J2 LTR MaLR 21 432 -18 596 242 24 0 chr20 7472116 7472240 -64681642 - FLAM_A SINE Alu -6 127 1 200 119 0 24 chr20 7473904 7473946 -64679936 + (CAAAA)n Simple_repeat Simple_repeat 4 44 0 257 191 17 0 chr20 7473968 7474058 -64679824 + L1MB8 LINE L1 5276 5369 -815 1093 167 93 0 chr20 7474058 7474262 -64679620 + AluJb SINE Alu 83 305 -7 3620 181 37 10 chr20 7474272 7475051 -64678831 + L1MB8 LINE L1 5379 6178 0 558 213 160 13 chr20 7475716 7475866 -64678016 + MER5A DNA MER1_type 9 180 -9 426 325 25 12 chr20 7475881 7476041 -64677841 + MIR SINE MIR 45 206 -56 215 233 78 112 chr20 7476237 7476353 -64677529 - MIR SINE MIR -32 230 119 1191 239 8 32 chr20 7476475 7476844 -64677038 - L1ME3 LINE L1 -1 6161 5802 579 297 238 7 chr20 7477495 7477564 -64676318 + L3 LINE CR1 416 468 -1109 2079 143 16 3 chr20 7477564 7477872 -64676010 + AluSx SINE Alu 1 312 0 579 297 238 7 chr20 7477872 7478256 -64675626 + L3 LINE CR1 468 974 -603 6364 34 0 14 chr20 7478316 7479131 -64674751 - L1PA5 LINE L1 0 6154 5351 618 325 129 61 chr20 7479207 7479911 -64673971 + L1MEd LINE L1 210 961 -5158 617 238 69 61 chr20 7479913 7480273 -64673609 - LTR18B LTR ERVL 0 614 1 303 314 112 12 chr20 7480283 7480541 -64673341 + L1MEd LINE L1 970 1253 -4866 498 338 80 27 chr20 7480548 7480950 -64672932 + L1MEd LINE L1 1304 1726 -4584 423 38 0 0 chr20 7481620 7481673 -64672209 + (CA)n Simple_repeat Simple_repeat 1 53 0 21 0 0 0 chr20 7481813 7481834 -64672048 + AT_rich Low_complexity Low_complexity 1 21 0 244 259 0 0 chr20 7482574 7482628 -64671254 + MIR SINE MIR 177 230 -32 348 218 0 0 chr20 7482691 7482778 -64671104 + (TA)n Simple_repeat Simple_repeat 2 88 0 421 242 37 99 chr20 7483331 7483492 -64670390 - MIR SINE MIR -83 179 29 911 148 18 6 chr20 7483731 7483900 -64669982 - MER3 DNA MER1_type -85 124 1 336 239 137 43 chr20 7483916 7484033 -64669849 + MER5A DNA MER1_type 9 136 -53 1273 228 72 6 chr20 7486485 7486917 -64666965 + MER89 LTR ERV1 1 559 0 327 49 0 0 chr20 7487062 7487103 -64666779 + (TG)n Simple_repeat Simple_repeat 1 41 0 21 0 0 0 chr20 7487212 7487233 -64666649 + AT_rich Low_complexity Low_complexity 1 21 0 1691 163 15 24 chr20 7487825 7488162 -64665720 + MLT1A1 LTR MaLR 17 350 -15 23 33 0 0 chr20 7488231 7488261 -64665621 + AT_rich Low_complexity Low_complexity 1 30 0 1806 56 0 0 chr20 7489169 7489384 -64664498 + AluY SINE Alu 93 307 -4 2167 105 17 0 chr20 7489472 7489766 -64664116 - AluSp SINE Alu -14 299 1 234 91 0 0 chr20 7489812 7489845 -64664037 + (TTCA)n Simple_repeat Simple_repeat 4 36 0 693 278 126 25 chr20 7489851 7490168 -64663714 - L2 LINE L2 -8 3305 2957 774 286 181 20 chr20 7490191 7490623 -64663259 + L2 LINE L2 2418 2779 -534 1765 188 31 31 chr20 7490623 7491011 -64662871 - MLT1B LTR MaLR -2 388 1 774 286 181 20 chr20 7491011 7491337 -64662545 + L2 LINE L2 2779 3308 -5 426 294 89 20 chr20 7491337 7491483 -64662399 - MIR SINE MIR -77 185 30 210 329 52 118 chr20 7491999 7492346 -64661536 + L2 LINE L2 2935 3258 -14 294 252 7 14 chr20 7492910 7493049 -64660833 + GA-rich Low_complexity Low_complexity 3 140 0 219 182 23 0 chr20 7493082 7493126 -64660756 + GA-rich Low_complexity Low_complexity 4 48 0 2198 118 0 7 chr20 7493172 7493476 -64660406 + AluSx SINE Alu 1 302 -10 356 261 74 80 chr20 7494979 7495290 -64658592 - LTR16C LTR ERVL -2 489 181 277 292 283 0 chr20 7495565 7495678 -64658204 + MIR SINE MIR 118 262 0 264 286 0 0 chr20 7495862 7495925 -64657957 - MIR3 SINE MIR -2 206 144 615 320 111 20 chr20 7497021 7497365 -64656517 - L3 LINE CR1 -67 1510 1136 194 258 136 68 chr20 7497461 7497593 -64656289 - MIR SINE MIR -118 144 4 225 299 189 8 chr20 7497622 7497749 -64656133 - L3 LINE CR1 -483 1094 945 187 396 7 22 chr20 7497832 7497971 -64655911 - L3 LINE CR1 -795 782 646 5497 62 4 5 chr20 7498132 7498892 -64654990 - L1PA5 LINE L1 -1876 4270 3512 9024 41 3 10 chr20 7498893 7500776 -64653106 + L1PA5 LINE L1 4272 6148 -6 386 301 90 46 chr20 7500902 7501266 -64652616 - LTR33 LTR ERVL -133 390 32 2284 115 0 6 chr20 7501542 7501854 -64652028 + AluSg SINE Alu 1 310 0 1026 233 34 48 chr20 7502279 7502631 -64651251 + MLT1A1 LTR MaLR 19 365 0 1831 111 0 32 chr20 7503864 7504179 -64649703 - L1MA5A LINE L1 -3 6294 5990 354 294 58 34 chr20 7506236 7506648 -64647234 - L1M4 LINE L1 -848 5298 4877 22 94 0 0 chr20 7506758 7506822 -64647060 + AT_rich Low_complexity Low_complexity 1 64 0 383 314 50 69 chr20 7507624 7507727 -64646155 + MLT1K LTR MaLR 94 197 -391 2094 139 0 0 chr20 7507727 7508038 -64645844 + AluSx SINE Alu 1 311 0 383 314 50 69 chr20 7508038 7508193 -64645689 + MLT1K LTR MaLR 197 349 -239 225 140 20 40 chr20 7508233 7508283 -64645599 + GA-rich Low_complexity Low_complexity 1 49 0 1642 118 80 42 chr20 7508468 7508757 -64645125 - AluSx SINE Alu -12 300 1 1187 223 101 78 chr20 7509049 7509574 -64644308 - MLT1E1 LTR MaLR -117 537 1 318 250 177 0 chr20 7510049 7510145 -64643737 + MIR SINE MIR 12 124 -138 365 313 17 0 chr20 7510288 7510403 -64643479 - L2 LINE L2 -4 3309 3193 200 313 92 15 chr20 7510426 7510557 -64643325 + L2 LINE L2 3168 3308 -5 375 60 0 0 chr20 7511067 7511117 -64642765 + (GGA)n Simple_repeat Simple_repeat 2 51 0 526 296 40 0 chr20 7511126 7511302 -64642580 - MIR SINE MIR -12 250 68 763 223 82 89 chr20 7512246 7512363 -64641519 + MLT1B LTR MaLR 1 117 -273 207 69 0 0 chr20 7512363 7512392 -64641490 + (ATAGG)n Simple_repeat Simple_repeat 4 32 0 763 223 82 89 chr20 7512392 7512413 -64641469 + MLT1B LTR MaLR 117 137 -253 2049 121 42 3 chr20 7512413 7512743 -64641139 + MER61A LTR ERV1 1 343 0 763 223 82 89 chr20 7512743 7512975 -64640907 + MLT1B LTR MaLR 137 390 0 401 304 7 0 chr20 7513194 7513329 -64640553 + MER46C DNA MER2_type 1 136 -202 189 196 0 0 chr20 7513383 7513429 -64640453 + CT-rich Low_complexity Low_complexity 4 49 0 29 84 0 0 chr20 7513705 7513776 -64640106 + AT_rich Low_complexity Low_complexity 1 71 0 1831 147 0 26 chr20 7513822 7514129 -64639753 - AluJo SINE Alu -1 311 13 2225 123 0 0 chr20 7516291 7516592 -64637290 + AluSx SINE Alu 1 301 -11 3416 123 65 9 chr20 7516731 7517302 -64636580 + LTR26 LTR ERV1 1 603 0 1844 148 25 0 chr20 7517600 7517878 -64636004 + AluSx SINE Alu 1 285 -27 927 239 29 11 chr20 7517996 7518268 -64635614 - L1MA9 LINE L1 -38 6274 5998 195 129 0 0 chr20 7519161 7519192 -64634690 + (T)n Simple_repeat Simple_repeat 1 31 0 240 246 134 60 chr20 7519248 7519382 -64634500 + MER5A DNA MER1_type 9 152 -37 2283 122 98 166 chr20 7519395 7520065 -64633817 + MER51A LTR ERV1 1 625 -9 443 250 88 54 chr20 7521518 7521722 -64632160 - L2 LINE L2 0 3313 3103 682 299 69 9 chr20 7521783 7522017 -64631865 - MIR SINE MIR -10 252 2 401 195 98 24 chr20 7522233 7522356 -64631526 - L1ME2 LINE L1 -9 6155 6024 543 268 159 19 chr20 7522915 7523072 -64630810 - MER5A DNA MER1_type -2 187 9 455 232 58 0 chr20 7523156 7523294 -64630588 + MER103 DNA DNA 8 153 -13 1147 206 41 4 chr20 7524172 7524415 -64629467 + L1PA16 LINE L1 5892 6143 -23 226 301 55 0 chr20 7524624 7524697 -64629185 - MIR SINE MIR -68 194 118 1994 179 6 8 chr20 7525061 7525424 -64628458 - MER47A DNA MER2_type -1 365 4 23 68 0 0 chr20 7526120 7526164 -64627718 + AT_rich Low_complexity Low_complexity 1 44 0 29 70 0 0 chr20 7526187 7526244 -64627638 + AT_rich Low_complexity Low_complexity 1 57 0 254 264 46 0 chr20 7526492 7526579 -64627303 - MLT2E LTR ERVL -19 609 519 284 288 0 0 chr20 7526634 7526700 -64627182 - MLT2E LTR ERVL -361 267 202 * 496 322 62 9 chr20 7526682 7526893 -64626989 - MLT2F LTR ERVL -246 417 196 236 279 38 0 chr20 7527416 7527495 -64626387 + (TA)n Simple_repeat Simple_repeat 1 82 0 261 0 0 0 chr20 7527508 7527522 -64626360 + (TG)n Simple_repeat Simple_repeat 1 14 -264 1794 69 0 0 chr20 7527522 7527738 -64626144 + AluY SINE Alu 96 311 0 261 0 0 0 chr20 7527738 7527757 -64626125 + (TG)n Simple_repeat Simple_repeat 13 278 0 261 0 0 0 chr20 7527757 7527786 -64626096 + (TG)n Simple_repeat Simple_repeat 2 30 0 351 0 0 0 chr20 7527842 7527881 -64626001 + (TG)n Simple_repeat Simple_repeat 2 40 0 532 309 14 19 chr20 7529170 7529377 -64624505 + LTR16C LTR ERVL 285 490 -1 312 195 293 0 chr20 7529859 7529941 -64623941 - MER5A DNA MER1_type -35 154 49 947 189 68 0 chr20 7529971 7530161 -64623721 - MER3 DNA MER1_type -1 208 6 21 0 0 0 chr20 7531588 7531609 -64622273 + AT_rich Low_complexity Low_complexity 1 21 0 276 254 130 7 chr20 7531833 7531971 -64621911 - L1ME4a LINE L1 0 6121 5967 248 282 94 12 chr20 7532111 7532196 -64621686 - MIR SINE MIR -71 191 100 2051 129 7 3 chr20 7532753 7533056 -64620826 - AluSq SINE Alu -9 304 1 1107 214 18 14 chr20 7533361 7533636 -64620246 - MER33 DNA MER1_type -1 323 48 1231 222 109 50 chr20 7533696 7534137 -64619745 - MLT1C LTR MaLR 0 467 1 22 56 0 0 chr20 7534137 7534173 -64619709 + AT_rich Low_complexity Low_complexity 1 36 0 39 0 0 0 chr20 7534266 7534305 -64619577 + AT_rich Low_complexity Low_complexity 1 39 0 1163 251 122 14 chr20 7534332 7534766 -64619116 + L1ME3A LINE L1 5452 5932 -238 308 162 86 38 chr20 7534894 7534999 -64618883 + L2 LINE L2 3078 3187 -126 2230 108 0 0 chr20 7535035 7535367 -64618515 + AluSq SINE Alu 1 332 0 193 298 39 58 chr20 7536005 7536109 -64617773 - MIR3 SINE MIR -97 111 10 205 182 0 0 chr20 7536334 7536367 -64617515 + T-rich Low_complexity Low_complexity 3 35 0 751 186 60 36 chr20 7536368 7536535 -64617347 - FAM SINE Alu -1 174 4 3067 184 27 33 chr20 7536566 7537087 -64616795 - L1MC3 LINE L1 -35 7750 7232 2646 96 3 0 chr20 7537087 7537441 -64616441 + THE1A LTR MaLR 1 355 0 3067 184 27 33 chr20 7537441 7537614 -64616268 - L1MC3 LINE L1 -553 7232 7060 22 35 0 0 chr20 7537627 7537656 -64616226 + AT_rich Low_complexity Low_complexity 1 29 0 246 245 0 0 chr20 7537685 7537738 -64616144 - L1MD3 LINE L1 -1426 6569 6517 1297 193 101 26 chr20 7538735 7539082 -64614800 + MER63B DNA MER1_type 1 373 -63 1368 215 102 94 chr20 7539201 7539723 -64614159 + MLT1H LTR MaLR 1 526 -23 209 364 98 14 chr20 7540441 7540584 -64613298 - MIR3 SINE MIR -21 187 33 715 177 0 0 chr20 7541068 7541181 -64612701 - AluJb SINE Alu -64 248 136 747 201 12 35 chr20 7541391 7541560 -64612322 - FRAM SINE Alu -1 165 1 518 337 136 47 chr20 7541826 7541921 -64611961 + L1MC4a LINE L1 4152 4237 -1909 2283 78 0 44 chr20 7541921 7542241 -64611641 - AluY SINE Alu -5 306 1 518 337 136 47 chr20 7542241 7542877 -64611005 + L1MC4a LINE L1 4237 4968 -1178 314 286 94 63 chr20 7542877 7543272 -64610610 + MLT1I LTR MaLR 1 407 -2 518 337 136 47 chr20 7543272 7543372 -64610510 + L1MC4a LINE L1 4968 5058 -1088 987 304 61 43 chr20 7543588 7544148 -64609734 + L1MC4a LINE L1 5316 5885 -1923 524 276 47 105 chr20 7545536 7546021 -64607861 + L1MC4a LINE L1 4866 5322 -824 1556 184 36 36 chr20 7546051 7546411 -64607471 + MLT1A1 LTR MaLR 1 621 -5 363 242 16 16 chr20 7546455 7546583 -64607299 + (TA)n Simple_repeat Simple_repeat 2 129 0 1017 299 102 6 chr20 7546585 7547103 -64606779 + L1MC4a LINE L1 5365 5932 -1876 319 352 100 44 chr20 7547249 7547749 -64606133 + L1MC4a LINE L1 6042 6569 -1239 326 335 78 35 chr20 7547753 7548010 -64605872 + L1ME4a LINE L1 5617 5884 -237 374 331 60 0 chr20 7550157 7550290 -64603592 - MIR SINE MIR -59 203 63 346 145 246 0 chr20 7551096 7551165 -64602717 - MER103 DNA DNA -73 93 8 1219 165 99 29 chr20 7551165 7551407 -64602475 - AluJo SINE Alu -48 264 6 207 381 59 17 chr20 7552225 7552343 -64601539 - MIR3 SINE MIR -37 171 49 1242 188 33 112 chr20 7552343 7552737 -64601145 - MLT1A1 LTR MaLR 0 365 3 389 70 18 0 chr20 7552975 7553032 -64600850 + (TA)n Simple_repeat Simple_repeat 1 58 0 520 340 72 0 chr20 7553804 7554013 -64599869 - MIR SINE MIR -31 231 8 1866 184 29 18 chr20 7554306 7554692 -64599190 + MLT1B LTR MaLR 1 390 0 682 212 27 65 chr20 7554872 7555056 -64598826 - MER5B DNA MER1_type -1 177 1 189 107 0 0 chr20 7556017 7556045 -64597837 + (CA)n Simple_repeat Simple_repeat 1 28 0 353 252 50 25 chr20 7556681 7556800 -64597082 + L2 LINE L2 1963 2084 -1230 26 0 0 0 chr20 7556800 7556826 -64597056 + AT_rich Low_complexity Low_complexity 1 26 0 1471 108 47 0 chr20 7556826 7557058 -64596824 - L1MB3 LINE L1 -11 6172 5930 11077 127 27 14 chr20 7557058 7558832 -64595050 + Tigger1 DNA MER2_type 2 1799 -619 26109 131 12 21 chr20 7558832 7561949 -64591933 + L1PA8A LINE L1 7 3150 -3296 2161 91 10 17 chr20 7561949 7562245 -64591637 + AluY SINE Alu 1 294 -17 2105 85 0 7 chr20 7562247 7562519 -64591363 + AluY SINE Alu 35 304 -7 26109 131 12 21 chr20 7562519 7565819 -64588063 + L1PA8A LINE L1 3151 6440 -6 3374 151 29 43 chr20 7565851 7566500 -64587382 + Tigger1 DNA MER2_type 1779 2418 0 1137 152 4 8 chr20 7566500 7566744 -64587138 - L1MB3 LINE L1 -251 5932 5641 1837 289 117 17 chr20 7566745 7567670 -64586212 + L2 LINE L2 2070 3145 -168 511 272 46 41 chr20 7567688 7567839 -64586043 - MER63A DNA MER1_type -1485 203 49 2535 68 0 0 chr20 7567839 7568148 -64585734 - AluY SINE Alu -2 309 1 511 272 46 41 chr20 7568148 7568191 -64585691 - MER63A DNA MER1_type -1639 49 8 349 236 34 11 chr20 7568212 7568301 -64585581 + L2 LINE L2 3202 3292 -21 198 0 0 0 chr20 7568830 7568852 -64585030 + (T)n Simple_repeat Simple_repeat 1 22 0 245 282 120 8 chr20 7569002 7569119 -64584763 - MIR3 SINE MIR -36 172 43 463 245 94 38 chr20 7569229 7569441 -64584441 + MER112 DNA MER1_type 30 253 -7 2108 111 46 32 chr20 7570351 7570720 -64583162 - THE1C LTR MaLR -1 374 1 487 231 98 69 chr20 7571165 7571338 -64582544 + MER5B DNA MER1_type 1 178 0 298 283 101 50 chr20 7571338 7571494 -64582388 - MIR SINE MIR -46 216 53 30 0 0 0 chr20 7572318 7572348 -64581534 + AT_rich Low_complexity Low_complexity 1 30 0 237 309 82 18 chr20 7575677 7575787 -64578095 - L2 LINE L2 0 3313 3197 2087 148 3 0 chr20 7576240 7576551 -64577331 - AluSx SINE Alu 0 312 1 284 361 46 3 chr20 7577158 7577308 -64576574 + MIR3 SINE MIR 14 167 -63 831 233 5 11 chr20 7577308 7577497 -64576385 - MER5A DNA MER1_type 0 189 2 207 351 18 35 chr20 7579508 7579622 -64574260 + MIR SINE MIR 30 141 -67 290 269 54 0 chr20 7580873 7580966 -64572916 - MIR SINE MIR -56 206 109 2014 174 155 54 chr20 7581038 7581630 -64572252 + MLT1E1 LTR MaLR 3 654 0 249 216 0 0 chr20 7581812 7581863 -64572019 - MIR SINE MIR -71 137 87 815 198 43 32 chr20 7583195 7583382 -64570500 + MER5A DNA MER1_type 1 189 0 637 280 43 10 chr20 7584635 7584842 -64569040 + LTR16A1 LTR ERVL 231 444 -13 208 163 0 23 chr20 7586185 7586228 -64567654 + GA-rich Low_complexity Low_complexity 4 45 0 1860 136 3 11 chr20 7586256 7586543 -64567339 + AluSx SINE Alu 10 294 -18 823 153 0 8 chr20 7587136 7587267 -64566615 - FLAM_C SINE Alu -3 130 1 1040 201 5 5 chr20 7588332 7588521 -64565361 + MER5A DNA MER1_type 1 189 0 452 321 24 18 chr20 7589331 7589499 -64564383 + MLT1J2 LTR MaLR 253 421 -29 337 277 59 0 chr20 7589650 7589757 -64564125 - MIR SINE MIR -62 146 38 212 218 126 23 chr20 7589987 7590074 -64563808 + MIR SINE MIR 132 227 -35 851 194 23 28 chr20 7590526 7590743 -64563139 - L1MB3 LINE L1 -3 6180 5965 10395 205 58 24 chr20 7590765 7594068 -64559814 - L1MC3 LINE L1 0 7785 4353 4364 108 9 3 chr20 7594068 7594714 -64559168 + L1PA11 LINE L1 5524 6173 -1 10395 205 58 24 chr20 7594714 7594894 -64558988 - L1MC3 LINE L1 -3432 4353 4181 387 180 27 18 chr20 7595687 7595798 -64558084 + (TATATG)n Simple_repeat Simple_repeat 2 113 0 910 296 36 13 chr20 7596042 7596434 -64557448 - MLT1J LTR MaLR 0 511 111 984 78 0 0 chr20 7596795 7596923 -64556959 - AluY SINE Alu -7 304 177 557 159 39 154 chr20 7599051 7599233 -64554649 + MER20 DNA MER1_type 1 161 -58 830 209 6 0 chr20 7601320 7601483 -64552399 + MER5A DNA MER1_type 3 166 -23 458 273 167 13 chr20 7601524 7601674 -64552208 + MER5A DNA MER1_type 11 183 -6 620 320 81 13 chr20 7602802 7603036 -64550846 + MIR SINE MIR 13 262 0 295 275 117 85 chr20 7603085 7603586 -64550296 - L2 LINE L2 -146 3167 1739 2618 23 0 7 chr20 7604068 7604378 -64549504 + AluY SINE Alu 1 308 -3 462 311 33 22 chr20 7604742 7604812 -64549070 - MIR SINE MIR -14 248 180 761 210 45 19 chr20 7604812 7604969 -64548913 - FRAM SINE Alu -5 161 1 462 311 33 22 chr20 7604969 7605078 -64548804 - MIR SINE MIR -82 180 67 2153 225 40 41 chr20 7605519 7606150 -64547732 + L1ME2 LINE L1 5525 6154 -10 28 29 0 0 chr20 7606596 7606631 -64547251 + AT_rich Low_complexity Low_complexity 1 35 0 779 318 19 19 chr20 7607423 7607684 -64546198 + MIR SINE MIR 2 262 0 181 299 117 13 chr20 7608047 7608124 -64545758 - L3 LINE CR1 -9 1568 1484 384 243 271 0 chr20 7608148 7608292 -64545590 + MER5A DNA MER1_type 7 189 0 399 341 43 12 chr20 7610353 7610517 -64543365 - MIR SINE MIR -10 252 84 2423 87 3 0 chr20 7610552 7610864 -64543018 - AluSp SINE Alu 0 313 1 1040 215 9 27 chr20 7611092 7611315 -64542567 - MER20 DNA MER1_type 0 219 1 627 246 161 42 chr20 7611464 7611850 -64542032 - MLT1J2 LTR MaLR -18 432 1 760 284 84 9 chr20 7612091 7612306 -64541576 + MIR SINE MIR 1 231 -31 206 237 0 0 chr20 7612782 7612820 -64541062 - MIR SINE MIR -63 145 108 249 222 16 0 chr20 7613755 7613818 -64540064 + MER116 DNA Mariner 15 78 -2 766 283 22 9 chr20 7614408 7614634 -64539248 + MIR SINE MIR 34 262 0 198 277 23 0 chr20 7716001 7716131 -64437751 + CT-rich Low_complexity Low_complexity 2 134 0 508 238 0 0 chr20 7716191 7716292 -64437590 - L1PB4 LINE L1 -7 6149 6049 234 0 0 0 chr20 7716435 7716461 -64437421 + (CA)n Simple_repeat Simple_repeat 2 27 0 1866 143 3 14 chr20 7718269 7718562 -64435320 - AluSx SINE Alu -22 290 1 3568 204 35 74 chr20 7718890 7719478 -64434404 - L1ME2 LINE L1 -8 6156 5635 3910 53 0 0 chr20 7719478 7719929 -64433953 - L1PA6 LINE L1 -1 6153 5703 3568 204 35 74 chr20 7719929 7720514 -64433368 - L1ME2 LINE L1 -529 5635 5028 289 305 0 0 chr20 7720562 7720657 -64433225 + (CCAA)n Simple_repeat Simple_repeat 4 98 0 219 293 32 81 chr20 7721600 7721723 -64432159 - MIR SINE MIR -62 146 30 1795 197 21 44 chr20 7723999 7724435 -64429447 - MLT1C LTR MaLR 0 467 42 252 130 0 0 chr20 7724465 7724511 -64429371 + (TA)n Simple_repeat Simple_repeat 2 47 0 342 214 0 82 chr20 7724521 7724619 -64429263 - L1MC4 LINE L1 -1339 6703 6614 201 210 0 0 chr20 7724625 7724687 -64429195 + (TA)n Simple_repeat Simple_repeat 2 63 0 944 309 28 21 chr20 7725113 7725629 -64428253 + L2 LINE L2 2520 3036 -277 1206 244 88 65 chr20 7725806 7726297 -64427585 + MLT1D LTR MaLR 4 505 0 * 1484 226 31 56 chr20 7726297 7726732 -64427150 + Charlie4a DNA MER1_type 42 465 -43 329 0 24 0 chr20 7726777 7726818 -64427064 + (GAAA)n Simple_repeat Simple_repeat 3 44 0 231 314 157 0 chr20 7726832 7726934 -64426948 - MIR3 SINE MIR -49 159 42 182 174 0 43 chr20 7727290 7727336 -64426546 + L2 LINE L2 3270 3313 0 213 39 0 0 chr20 7728604 7728630 -64425252 + (A)n Simple_repeat Simple_repeat 1 26 0 243 0 0 0 chr20 7729132 7729159 -64424723 + (T)n Simple_repeat Simple_repeat 1 27 0 1355 240 120 28 chr20 7729183 7729642 -64424240 - LTR33 LTR ERVL 0 521 21 2276 49 0 0 chr20 7729928 7730194 -64423688 + AluY SINE Alu 1 266 -45 957 253 120 31 chr20 7730202 7730585 -64423297 + LTR33 LTR ERVL 105 521 0 245 329 13 0 chr20 7731221 7731300 -64422582 - MIR3 SINE MIR -19 189 110 312 360 53 11 chr20 7731314 7731503 -64422379 - MER117 DNA MER1_type 0 197 1 916 142 7 7 chr20 7731912 7732067 -64421815 - LTR32 LTR ERVL 0 471 317 231 162 0 0 chr20 7732074 7732111 -64421771 - LTR32 LTR ERVL -119 352 316 2022 177 24 0 chr20 7732113 7732447 -64421435 - LTR32 LTR ERVL -122 349 8 502 145 0 0 chr20 7732636 7732712 -64421170 + MER116 DNA Mariner 5 80 0 592 235 0 0 chr20 7732900 7733015 -64420867 + FLAM_A SINE Alu 1 115 -18 218 196 36 18 chr20 7733109 7733165 -64420717 - MER91C DNA MER1_type -30 110 54 238 337 69 0 chr20 7733553 7733654 -64420228 + MIR SINE MIR 36 143 -65 302 333 108 20 chr20 7733973 7734222 -64419660 + LTR16A1 LTR ERVL 179 449 -8 235 278 28 0 chr20 7735676 7735748 -64418134 - L1ME4a LINE L1 -72 6049 5976 387 301 74 45 chr20 7735918 7736380 -64417502 - L1ME4a LINE L1 -119 6002 5528 216 143 0 0 chr20 7737217 7737259 -64416623 + (TG)n Simple_repeat Simple_repeat 1 42 0 492 302 22 17 chr20 7737269 7737448 -64416434 - LTR16C LTR ERVL -6 485 306 917 291 131 24 chr20 7737952 7738327 -64415555 + MLT1K LTR MaLR 159 573 -15 252 211 0 0 chr20 7738385 7738437 -64415445 - L2 LINE L2 -1 3312 3261 495 307 125 51 chr20 7738751 7739142 -64414740 - MLT1H LTR MaLR 0 549 130 494 315 91 14 chr20 7739884 7740103 -64413779 + MIR SINE MIR 15 250 -12 2539 119 22 11 chr20 7740173 7740533 -64413349 - THE1B LTR MaLR 0 364 1 2495 79 3 0 chr20 7740825 7741165 -64412717 - L1P LINE L1 -3038 3108 2768 402 37 0 0 chr20 7741141 7741195 -64412687 - L1P LINE L1 -2781 3365 3312 * 17248 84 8 0 chr20 7741195 7744224 -64409658 + L1PA7 LINE L1 3119 6151 -3 749 282 11 0 chr20 7744387 7744561 -64409321 - MER5B DNA MER1_type 0 178 3 901 301 102 3 chr20 7745373 7745715 -64408167 + MLT1J2 LTR MaLR 3 378 -72 619 238 144 0 chr20 7745862 7746043 -64407839 + LTR16A1 LTR ERVL 246 452 -5 216 266 31 16 chr20 7746052 7746116 -64407766 + L2 LINE L2 3188 3252 -61 909 184 92 5 chr20 7748590 7748775 -64405107 + MER3 DNA MER1_type 5 205 -4 716 241 47 56 chr20 7748845 7749054 -64404828 + MIR SINE MIR 1 209 -53 2287 95 3 0 chr20 7749054 7749349 -64404533 + AluSp SINE Alu 1 296 -17 716 241 47 56 chr20 7749349 7749371 -64404511 + MIR SINE MIR 209 230 -32 263 316 123 0 chr20 7749555 7749669 -64404213 - L2 LINE L2 -4 3309 3182 1355 216 52 54 chr20 7749670 7750135 -64403747 + MLT1H LTR MaLR 1 549 0 302 224 224 17 chr20 7750212 7750328 -64403554 - L2 LINE L2 -219 3053 2914 1280 283 74 22 chr20 7752011 7752510 -64401372 + L1MC/D LINE L1 5256 5780 -2028 796 206 39 54 chr20 7753338 7753542 -64400340 + MER63A DNA MER1_type 3 203 -7 560 272 0 8 chr20 7753672 7753797 -64400085 + MER5A DNA MER1_type 65 188 -1 218 274 65 0 chr20 7754441 7754503 -64399379 - MIR SINE MIR -111 151 86 272 305 74 11 chr20 7754750 7754845 -64399037 + MIR SINE MIR 13 113 -149 1204 224 56 66 chr20 7754849 7755242 -64398640 - LTR16A1 LTR ERVL 0 457 69 323 284 71 16 chr20 7755298 7755425 -64398457 + MIR SINE MIR 119 252 -10 1226 300 66 24 chr20 7755564 7756461 -64397421 - L2 LINE L2 -2 3311 2379 1940 123 0 27 chr20 7757729 7758052 -64395830 - AluSx SINE Alu 0 315 1 868 168 6 39 chr20 7758559 7758738 -64395144 + MER3 DNA MER1_type 21 193 -16 188 245 0 38 chr20 7759067 7759120 -64394762 + L2 LINE L2 3263 3313 0 473 263 75 64 chr20 7759156 7759583 -64394299 - MLT1H LTR MaLR 0 549 1 1966 176 101 89 chr20 7760106 7760680 -64393202 - L1ME1 LINE L1 -18 6148 5568 1456 275 40 36 chr20 7761110 7761557 -64392325 + LTR16C LTR ERVL 42 490 -1 646 305 64 24 chr20 7762335 7762584 -64391298 - MIR SINE MIR 0 262 4 250 335 151 20 chr20 7762584 7762828 -64391054 - L3 LINE CR1 -109 1468 1192 1394 275 63 24 chr20 7762968 7763598 -64390284 + L1MEc LINE L1 1745 2399 -3997 357 239 0 37 chr20 7766055 7766218 -64387664 + (CATA)n Simple_repeat Simple_repeat 1 157 0 295 322 0 8 chr20 7766249 7766367 -64387515 + (TG)n Simple_repeat Simple_repeat 2 118 0 256 201 14 36 chr20 7766416 7766555 -64387327 + (CATATA)n Simple_repeat Simple_repeat 6 141 0 1907 141 17 3 chr20 7767058 7767356 -64386526 + AluSx SINE Alu 1 302 -10 534 287 78 38 chr20 7767361 7767814 -64386068 - L1MC4a LINE L1 -360 5810 5430 225 316 65 29 chr20 7767967 7768242 -64385640 - L1MC4a LINE L1 -2358 3788 3504 5109 169 28 1 chr20 7768437 7769323 -64384559 + L1MB7 LINE L1 5259 6168 -16 300 283 180 48 chr20 7769346 7769618 -64384264 - L3 LINE CR1 -8 1569 1262 295 264 314 31 chr20 7770227 7770373 -64383509 + MIR SINE MIR 1 197 -65 183 80 0 0 chr20 7770373 7770398 -64383484 + (CA)n Simple_repeat Simple_repeat 1 25 0 295 264 314 31 chr20 7770398 7770410 -64383472 + MIR SINE MIR 197 204 -58 229 287 115 57 chr20 7771038 7771160 -64382722 - L2 LINE L2 0 3313 3185 1536 157 73 31 chr20 7771373 7771657 -64382225 - Charlie5 DNA MER1_type 0 2624 2318 1002 51 5 185 chr20 7771657 7771852 -64382030 + L1MA2 LINE L1 6145 6304 0 1536 157 73 31 chr20 7771852 7771950 -64381932 - Charlie5 DNA MER1_type -306 2318 2226 591 146 0 19 chr20 7771944 7772047 -64381835 - MER3 DNA MER1_type -44 165 65 * 209 280 180 0 chr20 7772062 7772162 -64381720 - L2 LINE L2 -1044 2270 2153 342 115 0 0 chr20 7773519 7773571 -64380311 + (TTCA)n Simple_repeat Simple_repeat 4 55 0 532 298 105 40 chr20 7773592 7773820 -64380062 - MIR SINE MIR -8 254 12 496 306 52 48 chr20 7773826 7774136 -64379746 - L2 LINE L2 -80 3233 2923 326 272 160 18 chr20 7774139 7774308 -64379574 + LTR16A1 LTR ERVL 3 195 -262 527 287 58 17 chr20 7774341 7774515 -64379367 + LTR16A1 LTR ERVL 277 457 0 710 337 100 12 chr20 7774518 7774919 -64378963 - L2 LINE L2 -390 2924 2489 716 186 8 8 chr20 7775029 7775147 -64378735 - FLAM_C SINE Alu -17 126 9 300 111 0 0 chr20 7775853 7775898 -64377984 + (T)n Simple_repeat Simple_repeat 1 45 0 1242 168 0 0 chr20 7777079 7777287 -64376595 - L1 LINE L1 -1147 4999 4792 1853 135 10 3 chr20 7777335 7777631 -64376251 + L1 LINE L1 4457 4754 -1392 289 327 33 42 chr20 7777922 7778136 -64375746 - L2 LINE L2 -1759 1555 1344 923 219 17 22 chr20 7779022 7779200 -64374682 - MER45A DNA AcHobo -1 177 1 590 178 110 0 chr20 7779555 7779673 -64374209 - AluSg/x SINE Alu -14 298 168 1725 128 58 0 chr20 7779567 7779825 -64374057 - AluSx SINE Alu -26 286 14 244 105 0 0 chr20 7779837 7779875 -64374007 - Alu SINE Alu -251 51 14 979 57 0 0 chr20 7780824 7780946 -64372936 - L1PA7 LINE L1 -5 6149 6028 1572 103 9 18 chr20 7780966 7781190 -64372692 - AluSc SINE Alu -7 302 81 673 232 54 21 chr20 7781190 7781431 -64372451 - L1ME2 LINE L1 -264 5900 5652 2901 264 96 10 chr20 7781433 7782364 -64371518 + L2 LINE L2 2043 3052 -261 2528 72 27 0 chr20 7782367 7782702 -64371180 + L1PA10 LINE L1 5821 6164 -4 348 271 62 69 chr20 7783063 7783207 -64370675 + MIR SINE MIR 66 208 -54 203 325 72 0 chr20 7784592 7784675 -64369207 + L3b LINE CR1 1407 1495 -88 639 294 92 27 chr20 7784867 7785204 -64368678 + LTR16C LTR ERVL 133 491 0 648 265 109 17 chr20 7785285 7785337 -64368545 - MIR SINE MIR -10 252 206 192 40 0 0 chr20 7785337 7785362 -64368520 + (TC)n Simple_repeat Simple_repeat 2 26 0 * 299 96 19 0 chr20 7785361 7785413 -64368469 + (TA)n Simple_repeat Simple_repeat 2 54 0 648 265 109 17 chr20 7785362 7785590 -64368292 - MIR SINE MIR -56 206 2 314 360 53 26 chr20 7787420 7787648 -64366234 - L2 LINE L2 -227 3045 2812 1347 254 15 0 chr20 7787800 7788130 -64365752 - LTR16C LTR ERVL 0 491 157 381 207 0 0 chr20 7789072 7789159 -64364723 + (TCCA)n Simple_repeat Simple_repeat 3 89 0 180 205 301 0 chr20 7789159 7789242 -64364640 - L3b LINE CR1 -188 1395 1288 397 220 105 24 chr20 7789463 7789672 -64364210 + L1MC4a LINE L1 4619 4844 -1302 337 298 116 29 chr20 7789862 7790104 -64363778 + L1MC4a LINE L1 5106 5368 -778 435 229 36 21 chr20 7790130 7790270 -64363612 + L1MC4a LINE L1 5409 5550 -2258 460 231 93 0 chr20 7790273 7790381 -64363501 + MER58B DNA MER1_type 1 118 -223 360 94 0 0 chr20 7790381 7790434 -64363448 + (TATTG)n Simple_repeat Simple_repeat 3 55 0 630 204 13 13 chr20 7790435 7790592 -64363290 + L1MA9 LINE L1 6113 6269 -43 899 204 43 0 chr20 7790592 7790803 -64363079 + MER58B DNA MER1_type 109 328 -13 655 243 104 43 chr20 7790823 7791197 -64362685 + L1MC4a LINE L1 5574 5970 -1838 256 306 63 0 chr20 7791475 7791586 -64362296 + L2 LINE L2 3118 3235 -78 292 250 115 8 chr20 7791899 7792096 -64361786 + L1MC4a LINE L1 5692 5752 -432 22 0 0 0 chr20 7792588 7792610 -64361272 + AT_rich Low_complexity Low_complexity 1 22 0 255 93 0 0 chr20 7792973 7793016 -64360866 + (TG)n Simple_repeat Simple_repeat 2 44 0 598 216 157 0 chr20 7793196 7793349 -64360533 - MER5A DNA MER1_type 0 189 13 184 281 18 0 chr20 7793379 7793436 -64360446 - MIR SINE MIR -131 77 20 273 355 60 30 chr20 7793498 7793529 -64360353 - MER5A DNA MER1_type -18 171 142 1620 173 61 4 chr20 7793529 7793687 -64360195 - AluJo SINE Alu -17 295 113 279 0 0 0 chr20 7793687 7793718 -64360164 + (TTTTA)n Simple_repeat Simple_repeat 2 32 0 1620 173 61 4 chr20 7793718 7793836 -64360046 - AluJo SINE Alu -199 113 3 273 355 60 30 chr20 7793836 7793970 -64359912 - MER5A DNA MER1_type -47 142 1 27 0 0 0 chr20 7794383 7794410 -64359472 + AT_rich Low_complexity Low_complexity 1 27 0 260 172 23 35 chr20 7795641 7795728 -64358154 + (TTA)n Simple_repeat Simple_repeat 2 87 0 229 228 39 94 chr20 7795739 7795866 -64358016 - MIR SINE MIR 0 262 143 287 284 45 0 chr20 7796539 7796627 -64357255 - MER117 DNA MER1_type -105 92 1 1562 219 90 86 chr20 7797115 7797662 -64356220 + MLT1H LTR MaLR 1 549 0 336 214 98 27 chr20 7798144 7798256 -64355626 + MIR3 SINE MIR 82 201 -7 821 276 70 0 chr20 7798278 7798506 -64355376 + MIR SINE MIR 19 262 0 398 276 119 27 chr20 7798783 7799019 -64354863 + MIR SINE MIR 10 262 0 1233 241 103 52 chr20 7799118 7799545 -64354337 + LTR16A1 LTR ERVL 9 457 0 2017 143 20 6 chr20 7800179 7800521 -64353361 + L1PB4 LINE L1 5809 6155 -1 237 309 73 44 chr20 7803022 7803158 -64350724 + L2 LINE L2 2567 2706 -608 1142 252 89 28 chr20 7803294 7803661 -64350221 - L1ME3A LINE L1 -9 6161 5761 1635 203 0 23 chr20 7803661 7803962 -64349920 - AluJb SINE Alu -18 294 1 1142 252 89 28 chr20 7803962 7804031 -64349851 - L1ME3A LINE L1 -409 5761 5698 477 270 52 33 chr20 7804065 7804335 -64349547 + L1M4 LINE L1 5119 5393 -753 302 380 88 15 chr20 7804349 7804554 -64349328 + L2 LINE L2 2872 3091 -181 226 333 0 15 chr20 7804603 7804669 -64349213 + L2 LINE L2 3205 3269 -3 221 0 35 0 chr20 7804892 7804921 -64348961 + (TA)n Simple_repeat Simple_repeat 2 31 0 1047 239 81 32 chr20 7806031 7806462 -64347420 - LTR16A1 LTR ERVL 0 457 6 389 339 131 51 chr20 7806486 7806938 -64346944 - L2 LINE L2 0 3313 2826 7356 91 9 0 chr20 7808538 7810342 -64343540 - L1PA7 LINE L1 -1 6153 4336 2261 114 7 0 chr20 7810850 7811149 -64342733 - AluSx SINE Alu -11 301 1 224 379 9 17 chr20 7811640 7811756 -64342126 + L2 LINE L2 2399 2513 -801 606 243 164 0 chr20 7811768 7811920 -64341962 + MER5A DNA MER1_type 7 183 -6 334 248 139 0 chr20 7811946 7812047 -64341835 + L2 LINE L2 2591 2705 -609 180 111 0 0 chr20 7812047 7812074 -64341808 + (A)n Simple_repeat Simple_repeat 1 27 0 419 337 111 33 chr20 7812172 7812356 -64341526 + L2 LINE L2 2853 3021 -292 1198 183 22 139 chr20 7812356 7812689 -64341193 - MLT1A1 LTR MaLR -2 363 85 2137 126 3 0 chr20 7812689 7812982 -64340900 - AluSx SINE Alu -18 294 1 1198 183 22 139 chr20 7812982 7813059 -64340823 - MLT1A1 LTR MaLR -280 85 1 419 337 111 33 chr20 7813059 7813298 -64340584 + L2 LINE L2 3021 3309 -4 225 94 0 0 chr20 7813366 7813398 -64340484 + (T)n Simple_repeat Simple_repeat 1 32 0 511 233 15 15 chr20 7813796 7813929 -64339953 - MER94 DNA DNA 0 134 2 783 264 16 51 chr20 7813979 7814233 -64339649 + MIR SINE MIR 14 258 -4 23 0 0 0 chr20 7814240 7814263 -64339619 + AT_rich Low_complexity Low_complexity 1 23 0 837 172 0 8 chr20 7814273 7814407 -64339475 - FAM SINE Alu -22 163 31 181 298 46 46 chr20 7814423 7814554 -64339328 - L2 LINE L2 -533 2781 2651 346 345 103 43 chr20 7816511 7816949 -64336933 - L2 LINE L2 -1 3271 2808 528 313 147 11 chr20 7817117 7817382 -64336500 - MLT1K LTR MaLR -187 401 101 353 315 0 0 chr20 7817777 7817888 -64335994 + LTR16A1 LTR ERVL 1 111 -346 * 680 285 30 0 chr20 7817876 7818111 -64335771 + LTR16A1 LTR ERVL 216 457 0 192 135 0 0 chr20 7820674 7820711 -64333171 + (GA)n Simple_repeat Simple_repeat 2 38 0 2028 85 8 0 chr20 7821246 7821623 -64332259 - AluSq SINE Alu 0 401 23 204 200 0 0 chr20 7822242 7822277 -64331605 + (CAG)n Simple_repeat Simple_repeat 2 36 0 288 258 21 21 chr20 7822280 7822377 -64331505 + MER94 DNA DNA 4 100 -34 345 197 0 0 chr20 7822467 7822538 -64331344 + (CA)n Simple_repeat Simple_repeat 1 71 0 3135 145 13 40 chr20 7822559 7822789 -64331093 + L1MA9 LINE L1 5708 5943 -369 2033 148 18 6 chr20 7822789 7823128 -64330754 + MER2 DNA MER2_type 2 344 0 3135 145 13 40 chr20 7823128 7823519 -64330363 + L1MA9 LINE L1 5943 6312 0 199 360 118 7 chr20 7823989 7824142 -64329740 - MIR SINE MIR -85 177 8 472 262 98 13 chr20 7825605 7825950 -64327932 + MLT1J2 LTR MaLR 62 449 -1 1785 203 70 37 chr20 7826355 7826839 -64327043 - MLT1H LTR MaLR -37 512 13 191 312 92 28 chr20 7826976 7827085 -64326797 + MIR SINE MIR 33 148 -60 1146 237 75 25 chr20 7829125 7829606 -64324276 - MER114 LTR ERV 0 648 144 994 251 122 3 chr20 7829615 7829919 -64323963 + MLT1A2 LTR MaLR 1 367 -23 23 54 0 0 chr20 7830068 7830105 -64323777 + AT_rich Low_complexity Low_complexity 1 37 0 24 32 0 0 chr20 7830220 7830251 -64323631 + AT_rich Low_complexity Low_complexity 1 31 0 22 0 0 0 chr20 7830309 7830331 -64323551 + AT_rich Low_complexity Low_complexity 1 22 0 29 101 0 0 chr20 7830355 7830454 -64323428 + AT_rich Low_complexity Low_complexity 1 99 0 27 73 0 0 chr20 7830488 7830543 -64323339 + AT_rich Low_complexity Low_complexity 1 55 0 634 277 113 35 chr20 7830760 7831132 -64322750 + MLT1J2 LTR MaLR 50 450 0 22 56 0 0 chr20 7831330 7831366 -64322516 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr20 7831371 7831392 -64322490 + AT_rich Low_complexity Low_complexity 1 21 0 719 322 38 8 chr20 7831402 7831638 -64322244 - MIR SINE MIR -13 249 7 205 353 35 17 chr20 7831710 7831826 -64322056 - MIR SINE MIR 0 262 145 637 314 67 21 chr20 7833752 7834128 -64319754 - LTR16C LTR ERVL 0 491 99 555 233 259 11 chr20 7834411 7834600 -64319282 - MIR SINE MIR -12 250 15 1180 280 87 3 chr20 7834686 7835043 -64318839 + MLT1F LTR MaLR 1 387 -155 2386 219 68 41 chr20 7835043 7835934 -64317948 + L1ME2 LINE L1 4463 5375 -789 1279 221 13 93 chr20 7835934 7836332 -64317550 + MLT1A2 LTR MaLR 1 366 -8 1183 241 3 18 chr20 7836338 7836666 -64317216 + L1ME2 LINE L1 5369 5691 -473 * 1667 180 21 0 chr20 7836662 7836990 -64316892 + L1PB4 LINE L1 5784 6118 -38 2244 102 0 19 chr20 7836995 7837310 -64316572 + AluSc SINE Alu 1 309 0 1097 246 111 26 chr20 7837382 7837805 -64316077 + L1ME2 LINE L1 5698 6156 -8 2101 94 0 76 chr20 7838380 7838708 -64315174 - AluSq SINE Alu -10 303 1 279 235 0 0 chr20 7838877 7838928 -64314954 + L2 LINE L2 3212 3262 -51 275 234 0 16 chr20 7838945 7839009 -64314873 - MIR SINE MIR -65 143 81 3116 166 9 5 chr20 7839011 7839573 -64314309 + L1MB3 LINE L1 5618 6181 -2 2001 156 77 0 chr20 7839609 7839948 -64313934 + MLT1A1 LTR MaLR 1 365 0 770 172 41 53 chr20 7840175 7840344 -64313538 - MER5B DNA MER1_type -1 177 11 373 315 125 16 chr20 7840542 7840726 -64313156 + MIR SINE MIR 7 210 -52 276 30 0 0 chr20 7840943 7840976 -64312906 + (TG)n Simple_repeat Simple_repeat 1 33 0 483 159 30 76 chr20 7842671 7842803 -64311079 - L1MA9 LINE L1 -104 6208 6083 570 136 29 0 chr20 7842808 7842911 -64310971 + L1MB1 LINE L1 5765 5870 -319 343 201 49 49 chr20 7842942 7843086 -64310796 - L1MC5 LINE L1 -284 7677 7534 233 370 31 24 chr20 7843175 7843302 -64310580 + L2 LINE L2 3186 3313 0 593 129 0 0 chr20 7845427 7845512 -64308370 + L1PB4 LINE L1 6059 6143 -13 191 391 0 22 chr20 7845714 7845804 -64308078 + MIR3 SINE MIR 9 96 -112 269 209 275 0 chr20 7845804 7845895 -64307987 - MER5A DNA MER1_type 0 189 74 239 298 182 0 chr20 7845940 7846061 -64307821 + MIR SINE MIR 88 230 -32 264 303 22 11 chr20 7846102 7846191 -64307691 - MIR3 SINE MIR 0 208 119 26 0 0 0 chr20 7846386 7846412 -64307470 + AT_rich Low_complexity Low_complexity 1 26 0 641 269 13 0 chr20 7847634 7847790 -64306092 + MLT1H LTR MaLR 101 258 -291 223 114 45 0 chr20 7848084 7848128 -64305754 + (TCCA)n Simple_repeat Simple_repeat 4 49 0 238 235 0 0 chr20 7848143 7848194 -64305688 + MLT1H LTR MaLR 485 535 -14 282 299 176 18 chr20 7848567 7848755 -64305127 - MIR SINE MIR -46 216 4 282 56 0 0 chr20 7848773 7848809 -64305073 + (GAA)n Simple_repeat Simple_repeat 2 37 0 182 260 0 20 chr20 7848906 7848956 -64304926 - L2 LINE L2 -10 3262 3214 429 344 71 34 chr20 7849176 7849557 -64304325 + LTR16C LTR ERVL 97 491 0 20147 107 13 13 chr20 7851414 7855235 -64298647 + L1PA7 LINE L1 2325 6154 0 1943 191 19 12 chr20 7855688 7856106 -64297776 - MER61C LTR ERV1 0 434 14 432 285 177 0 chr20 7857915 7858045 -64295837 + MER5A DNA MER1_type 31 183 -6 2034 220 89 55 chr20 7858295 7858926 -64294956 - MLT1E1 LTR MaLR 0 654 3 231 250 15 15 chr20 7858927 7858995 -64294887 + (CATATA)n Simple_repeat Simple_repeat 3 70 0 747 254 61 35 chr20 7859035 7859491 -64294391 + MER113 DNA MER1_type? 2 469 -52 2319 120 28 11 chr20 7860429 7860787 -64293095 - THE1B LTR MaLR 0 364 1 236 231 26 39 chr20 7860983 7861061 -64292821 - MER5A DNA MER1_type -69 120 44 570 231 121 6 chr20 7861425 7861598 -64292284 + MIR SINE MIR 43 235 -27 1839 164 52 3 chr20 7861604 7861952 -64291930 + MLT1A1 LTR MaLR 1 365 0 396 273 105 7 chr20 7862064 7862207 -64291675 - MIR SINE MIR -58 204 48 535 221 74 25 chr20 7862235 7862398 -64291484 + MER69A DNA AcHobo 3 173 -4 835 183 124 0 chr20 7862681 7862867 -64291015 - MER3 DNA MER1_type 0 209 1 933 280 59 55 chr20 7863819 7864256 -64289626 + MLT1J2 LTR MaLR 1 439 -11 1135 232 75 3 chr20 7864256 7864562 -64289320 + MLT1H LTR MaLR 1 328 -221 360 226 32 97 chr20 7864596 7864720 -64289162 + MLT1H LTR MaLR 454 547 -2 396 0 0 0 chr20 7864880 7864924 -64288958 + (CA)n Simple_repeat Simple_repeat 1 44 0 378 310 35 62 chr20 7865307 7865597 -64288285 + LTR16C LTR ERVL 138 419 -72 251 264 153 0 chr20 7865898 7865970 -64287912 - L2 LINE L2 -1 3312 3230 269 254 64 0 chr20 7866906 7867016 -64286866 + MER113 DNA MER1_type? 93 209 -312 1651 203 10 0 chr20 7867862 7868163 -64285719 + AluJo SINE Alu 3 306 -6 455 287 76 32 chr20 7868692 7868849 -64285033 - MER5A DNA MER1_type 0 189 26 2560 157 15 18 chr20 7869283 7869741 -64284141 + MER66B LTR ERV1 1 457 -29 1523 168 3 61 chr20 7870092 7870419 -64283463 + AluJb SINE Alu 3 310 -2 186 167 0 0 chr20 7870419 7870455 -64283427 + GA-rich Low_complexity Low_complexity 1 36 0 300 311 89 7 chr20 7870481 7870616 -64283266 + MIR3 SINE MIR 52 197 -11 425 343 24 12 chr20 7870719 7870885 -64282997 - MIR3 SINE MIR -18 190 23 1270 271 64 8 chr20 7871213 7871601 -64282281 + LTR16C LTR ERVL 79 488 -3 788 255 45 15 chr20 7871693 7871960 -64281922 - LTR16C LTR ERVL -8 483 209 200 200 0 0 chr20 7872734 7872769 -64281113 + A-rich Low_complexity Low_complexity 3 37 0 306 297 44 0 chr20 7874407 7874498 -64279384 - L2 LINE L2 -5 3308 3214 211 158 26 0 chr20 7875295 7875333 -64278549 + GA-rich Low_complexity Low_complexity 2 40 0 739 247 156 37 chr20 7875554 7875906 -64277976 + LTR16C LTR ERVL 97 490 -1 6431 179 38 42 chr20 7876512 7876659 -64277223 - L1MA9 LINE L1 0 7272 7126 306 0 0 0 chr20 7876659 7876693 -64277189 + (TG)n Simple_repeat Simple_repeat 1 34 0 6431 179 38 42 chr20 7876693 7878563 -64275319 - L1MA9 LINE L1 -146 7126 5249 1406 233 37 3 chr20 7878563 7878859 -64275023 + AluJo SINE Alu 1 306 -6 6431 179 38 42 chr20 7878859 7879102 -64274780 - L1MA9 LINE L1 -2023 5249 5006 813 178 0 20 chr20 7879102 7879248 -64274634 - FLAM_C SINE Alu 0 143 1 6431 179 38 42 chr20 7879248 7879515 -64274367 - L1MA9 LINE L1 -2266 5006 4695 1344 218 194 17 chr20 7879507 7879925 -64273957 - L1MA9 LINE L1 -6538 492 1 * 371 192 154 58 chr20 7879934 7879984 -64273898 - MIR SINE MIR -112 150 106 2271 181 43 0 chr20 7879984 7880398 -64273484 - MSTB1 LTR MaLR 0 432 1 371 192 154 58 chr20 7880398 7880451 -64273431 - MIR SINE MIR -156 106 37 194 79 0 26 chr20 7881297 7881335 -64272547 + (TTTTTG)n Simple_repeat Simple_repeat 3 39 0 333 327 46 0 chr20 7882965 7883118 -64270764 - MIR SINE MIR -37 225 66 280 278 14 0 chr20 7883233 7883305 -64270577 + MER116 DNA Mariner 3 75 -5 735 203 31 78 chr20 7883887 7884079 -64269803 - MER5A DNA MER1_type 0 189 7 309 325 170 10 chr20 7884300 7884494 -64269388 - MIR SINE MIR -1 261 37 800 256 118 44 chr20 7885535 7885941 -64267941 + L1MC4a LINE L1 5595 6030 -1778 539 328 124 47 chr20 7886525 7886764 -64267118 + L2 LINE L2 1978 2197 -1075 1783 168 25 0 chr20 7886764 7887050 -64266832 - AluJo SINE Alu -19 293 1 539 328 124 47 chr20 7887050 7887192 -64266690 + L2 LINE L2 2197 2327 -945 2335 94 0 3 chr20 7887192 7887489 -64266393 - AluSg SINE Alu -12 298 3 2364 75 13 41 chr20 7887499 7887817 -64266065 - AluY SINE Alu -2 309 1 539 328 124 47 chr20 7887817 7888015 -64265867 + L2 LINE L2 2335 2516 -756 2133 133 6 35 chr20 7888015 7888362 -64265520 - MER1B DNA MER1_type 0 337 1 539 328 124 47 chr20 7888362 7888805 -64265077 + L2 LINE L2 2516 3079 -193 1560 179 105 30 chr20 7890268 7890631 -64263251 + L1MC4 LINE L1 7502 7891 -151 250 115 19 0 chr20 7890634 7890686 -64263196 - LTR66 LTR ERVL -164 446 394 242 232 0 0 chr20 7890710 7890766 -64263116 - L1MC4 LINE L1 -1339 6703 6648 401 198 75 56 chr20 7890766 7890913 -64262969 + L1MC4 LINE L1 7901 8038 -4 363 289 164 13 chr20 7891716 7891868 -64262014 - MIR3 SINE MIR -24 184 10 633 245 88 60 chr20 7892652 7892981 -64260901 + L1ME4a LINE L1 5284 5621 -590 2241 109 3 0 chr20 7893169 7893472 -64260410 - AluSq SINE Alu -9 304 1 2120 129 10 0 chr20 7893795 7894105 -64259777 - AluSq SINE Alu 0 313 1 317 251 77 115 chr20 7894174 7894539 -64259343 + L1ME4a LINE L1 5665 6017 -104 2232 227 18 4 chr20 7894728 7895178 -64258704 - LTR16C LTR ERVL 0 491 36 2406 80 0 0 chr20 7895595 7895883 -64257999 - AluSg SINE Alu -22 288 1 607 266 83 87 chr20 7896287 7896681 -64257201 + LTR33 LTR ERVL 17 411 -110 2119 113 3 0 chr20 7896681 7896996 -64256886 - AluSx SINE Alu 0 316 1 607 266 83 87 chr20 7896996 7897107 -64256775 + LTR33 LTR ERVL 411 521 0 306 206 0 0 chr20 7900286 7900354 -64253528 + CT-rich Low_complexity Low_complexity 1 68 0 1464 219 36 15 chr20 7900548 7900881 -64253001 + MER58B DNA MER1_type 2 341 0 273 243 40 0 chr20 7900898 7900972 -64252910 + MIR SINE MIR 63 139 -123 464 275 95 11 chr20 7901694 7901883 -64251999 + MIR SINE MIR 26 230 -32 2161 225 62 60 chr20 7902231 7902418 -64251464 - L1ME3A LINE L1 -5 6165 5980 351 0 0 0 chr20 7902418 7902457 -64251425 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 2161 225 62 60 chr20 7902457 7902469 -64251413 - L1ME3A LINE L1 -190 5980 5970 1922 133 4 0 chr20 7902469 7902740 -64251142 - AluSq SINE Alu -41 272 1 2161 225 62 60 chr20 7902740 7903251 -64250631 - L1ME3A LINE L1 -200 5970 5453 255 342 13 0 chr20 7904171 7904247 -64249635 - MIR SINE MIR 0 262 186 1800 131 0 0 chr20 7905151 7905425 -64248457 + L1MA5 LINE L1 6025 6298 -2 279 247 10 41 chr20 7905815 7905912 -64247970 + L2 LINE L2 3220 3313 0 3358 177 58 31 chr20 7906946 7907664 -64246218 - L1MA9 LINE L1 -30 6282 5545 231 170 0 0 chr20 7908099 7908146 -64245736 + T-rich Low_complexity Low_complexity 1 47 0 423 289 34 82 chr20 7908381 7908672 -64245210 - L3 LINE CR1 -702 875 599 213 39 0 0 chr20 7908988 7909014 -64244868 + (T)n Simple_repeat Simple_repeat 1 26 0 1432 147 9 5 chr20 7909029 7909253 -64244629 - AluSq SINE Alu -88 225 1 2912 226 35 4 chr20 7910015 7910693 -64243189 + L1MC4a LINE L1 7109 7807 -1 202 323 0 32 chr20 7910798 7910860 -64243022 + L3 LINE CR1 1516 1575 -2 189 262 0 0 chr20 7911611 7911653 -64242229 + MIR3 SINE MIR 118 159 -49 1756 225 47 21 chr20 7911653 7912124 -64241758 - Charlie4a DNA MER1_type -1 507 25 927 249 21 0 chr20 7914638 7914827 -64239055 + MER58A DNA MER1_type 32 224 0 1859 222 66 2 chr20 7914827 7915359 -64238523 - L1M4 LINE L1 -1566 4580 4015 3087 203 11 15 chr20 7915603 7916238 -64237644 + L1ME2 LINE L1 5541 6334 0 432 121 0 0 chr20 7916246 7916312 -64237570 + Alu SINE Alu 244 309 -2 817 272 71 5 chr20 7918443 7918667 -64235215 - MIR SINE MIR -21 241 3 861 198 51 0 chr20 7918829 7919006 -64234876 - MER3 DNA MER1_type -18 191 6 581 269 154 0 chr20 7919025 7919181 -64234701 + MER5A DNA MER1_type 9 188 -1 376 360 80 6 chr20 7919473 7919648 -64234234 + MIR3 SINE MIR 16 203 -5 1192 179 37 172 chr20 7919857 7920322 -64233560 + MLT1H LTR MaLR 2 403 -146 482 274 110 0 chr20 7920478 7920642 -64233240 - MIR SINE MIR -47 215 34 2138 121 0 25 chr20 7920646 7920961 -64232921 - AluSx SINE Alu -4 308 2 321 362 40 7 chr20 7921050 7921202 -64232680 + MIR3 SINE MIR 49 205 -3 2319 108 3 16 chr20 7921217 7921533 -64232349 + AluSx SINE Alu 1 312 0 797 308 54 0 chr20 7921983 7922259 -64231623 + LTR16A LTR ERVL 1 291 -159 218 292 31 0 chr20 7922456 7922521 -64231361 + GA-rich Low_complexity Low_complexity 3 69 0 903 88 16 39 chr20 7922522 7922704 -64231178 + (GGGAA)n Simple_repeat Simple_repeat 3 180 0 194 203 0 102 chr20 7923125 7923184 -64230698 - MIR SINE MIR -62 200 148 277 222 19 0 chr20 7923237 7923291 -64230591 + MLT1I LTR MaLR 81 135 -274 518 312 32 0 chr20 7923559 7923716 -64230166 - MIR SINE MIR -98 164 3 221 340 27 41 chr20 7925882 7926029 -64227853 - L2 LINE L2 -614 2700 2556 214 318 68 38 chr20 7926099 7926231 -64227651 - L2 LINE L2 -871 2443 2308 203 310 40 80 chr20 7926508 7926708 -64227174 + L2 LINE L2 2230 2421 -893 2821 95 14 0 chr20 7926790 7927149 -64226733 - THE1B LTR MaLR 0 364 1 187 281 45 34 chr20 7927566 7927655 -64226227 + MIR SINE MIR 112 201 -61 258 32 0 0 chr20 7928360 7928391 -64225491 + (CA)n Simple_repeat Simple_repeat 1 31 0 264 297 79 0 chr20 7928469 7928570 -64225312 + MIR SINE MIR 36 144 -118 419 256 61 72 chr20 7928575 7928755 -64225127 + MER5A DNA MER1_type 11 188 -1 703 299 103 0 chr20 7929632 7929846 -64224036 + MIR SINE MIR 27 262 0 196 237 0 0 chr20 7930274 7930312 -64223570 + L2 LINE L2 3262 3299 -14 301 281 236 15 chr20 7931998 7932224 -64221658 + L3b LINE CR1 1183 1455 -128 408 20 0 0 chr20 7933977 7934026 -64219856 + (TG)n Simple_repeat Simple_repeat 2 50 0 25 51 0 0 chr20 7935063 7935102 -64218780 + AT_rich Low_complexity Low_complexity 1 39 0 1336 259 134 34 chr20 7935182 7935750 -64218132 - L1MC4 LINE L1 -143 7899 7257 2130 136 0 0 chr20 7935750 7936052 -64217830 - AluSx SINE Alu -10 302 1 1336 259 134 34 chr20 7936052 7936131 -64217751 - L1MC4 LINE L1 -785 7257 7187 202 281 37 12 chr20 7937400 7937482 -64216400 - MIR3 SINE MIR -11 197 114 24 32 0 0 chr20 7937497 7937528 -64216354 + AT_rich Low_complexity Low_complexity 1 31 0 323 330 0 0 chr20 7937530 7937621 -64216261 - L2 LINE L2 -4 3268 3178 1379 157 32 98 chr20 7937719 7938128 -64215754 - Charlie5 DNA MER1_type 0 2618 2237 619 170 0 9 chr20 7938132 7938244 -64215638 - MER3 DNA MER1_type -42 167 57 203 326 27 54 chr20 7938315 7938462 -64215420 - MIR3 SINE MIR -61 147 5 1076 276 87 43 chr20 7939830 7940315 -64213567 + MLT1H LTR MaLR 44 549 0 1434 110 14 23 chr20 7940662 7940880 -64213002 + AluSg/x SINE Alu 96 311 -1 470 194 0 43 chr20 7942294 7942531 -64211351 + (CA)n Simple_repeat Simple_repeat 1 226 0 24 32 0 0 chr20 7943019 7943050 -64210832 + AT_rich Low_complexity Low_complexity 1 31 0 2015 166 0 3 chr20 7943215 7943528 -64210354 - AluSx SINE Alu 0 312 1 336 209 72 58 chr20 7943564 7943703 -64210179 + L1MC5 LINE L1 7630 7770 -191 1876 178 0 7 chr20 7943887 7944196 -64209686 + AluJb SINE Alu 1 307 -5 24 0 0 0 chr20 7945994 7946018 -64207864 + AT_rich Low_complexity Low_complexity 1 24 0 504 356 21 13 chr20 7947858 7948172 -64205710 + Charlie8 DNA MER1_type 9 309 -2108 253 224 90 0 chr20 7948204 7948271 -64205611 + MLT1J1 LTR MaLR 3 75 -371 1652 166 0 7 chr20 7948272 7948682 -64205200 + L1MB3 LINE L1 5682 6178 -5 510 279 191 24 chr20 7948697 7948991 -64204891 + MLT1J1 LTR MaLR 96 438 -8 1646 79 9 0 chr20 7949324 7949538 -64204344 - MSTA LTR MaLR -1 427 212 1756 144 7 4 chr20 7949540 7949810 -64204072 + AluSx SINE Alu 41 311 -1 354 138 0 0 chr20 7949810 7949868 -64204014 + (GA)n Simple_repeat Simple_repeat 1 58 0 1300 54 0 22 chr20 7949868 7950052 -64203830 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 1377 138 9 9 chr20 7950053 7950278 -64203604 - MSTA LTR MaLR -198 230 6 223 335 87 29 chr20 7950450 7950623 -64203259 - MIR SINE MIR -13 249 67 1531 207 65 70 chr20 7950712 7951252 -64202630 - MLT1H LTR MaLR 0 549 13 240 345 0 0 chr20 7951273 7951386 -64202496 - HAL1 LINE L1 -145 2362 2250 939 151 138 26 chr20 7951409 7951641 -64202241 - L1MC4 LINE L1 -48 7994 7737 668 236 152 0 chr20 7951646 7951824 -64202058 - MER3 DNA MER1_type -4 205 1 2701 113 20 29 chr20 7951927 7952329 -64201553 - LTR56 LTR ERV1 -6 439 40 1852 155 7 14 chr20 7952329 7952619 -64201263 + AluSx SINE Alu 1 288 -24 2701 113 20 29 chr20 7952619 7952658 -64201224 - LTR56 LTR ERV1 -405 40 2 648 222 17 43 chr20 7952767 7952997 -64200885 - LTR56-int LTR ERV1 -330 4793 4570 1046 261 40 4 chr20 7953138 7953410 -64200472 - LTR16A1 LTR ERVL 0 457 176 1734 228 85 56 chr20 7954393 7954960 -64198922 + MLT1G1 LTR MaLR 1 583 -12 935 192 10 61 chr20 7955715 7955792 -64198090 + MER5A DNA MER1_type 1 80 -109 1788 148 30 27 chr20 7955792 7956089 -64197793 + AluJo SINE Alu 1 298 -14 935 192 10 61 chr20 7956089 7956209 -64197673 + MER5A DNA MER1_type 80 188 -1 1255 242 234 25 chr20 7956225 7956857 -64197025 - LTR50 LTR ERVL -29 766 3 496 290 64 60 chr20 7958506 7958784 -64195098 + L1M4 LINE L1 4392 4674 -1472 2051 146 3 0 chr20 7958784 7959086 -64194796 + AluSx SINE Alu 1 303 -9 496 290 64 60 chr20 7959086 7959259 -64194623 + L1M4 LINE L1 4674 4845 -1301 378 323 81 16 chr20 7959420 7959475 -64194407 + L1M4 LINE L1 5052 5102 -1044 234 91 0 0 chr20 7959475 7959508 -64194374 + (CA)n Simple_repeat Simple_repeat 2 34 0 378 323 81 16 chr20 7959508 7959762 -64194120 + L1M4 LINE L1 5102 5381 -765 273 246 57 41 chr20 7959893 7960015 -64193867 + L1M4 LINE L1 5531 5654 -520 2432 93 0 6 chr20 7961515 7961827 -64192055 + AluSx SINE Alu 1 310 -2 180 0 0 0 chr20 7962582 7962602 -64191280 + (A)n Simple_repeat Simple_repeat 1 20 0 21 36 0 0 chr20 7963298 7963326 -64190556 + AT_rich Low_complexity Low_complexity 1 28 0 575 231 43 32 chr20 7963632 7963818 -64190064 + MER5A DNA MER1_type 1 188 -1 752 220 13 93 chr20 7964810 7965051 -64188831 - MIR SINE MIR -11 251 21 810 168 74 7 chr20 7965398 7965547 -64188335 + MER5B DNA MER1_type 10 168 -10 1859 226 91 34 chr20 7967044 7967628 -64186254 + L1ME2 LINE L1 5528 6144 -20 365 252 189 8 chr20 7968094 7968221 -64185661 + MER5A DNA MER1_type 34 183 -6 389 219 76 17 chr20 7968406 7968525 -64185357 + MIR SINE MIR 107 232 -30 714 219 69 0 chr20 7968752 7968912 -64184970 + MER5A DNA MER1_type 1 171 -18 202 288 0 0 chr20 7969173 7969232 -64184650 - L2 LINE L2 -4 3309 3251 636 306 124 14 chr20 7970218 7970493 -64183389 - MLT1H LTR MaLR -13 536 232 420 237 170 7 chr20 7971152 7971287 -64182595 - MER5A DNA MER1_type -7 182 26 734 291 101 78 chr20 7971597 7972028 -64181854 - L3 LINE CR1 -33 1544 1124 2355 94 3 3 chr20 7972028 7972325 -64181557 + AluSg SINE Alu 1 297 -13 2845 124 42 31 chr20 7972334 7972857 -64181025 + L1MB2 LINE L1 5642 6170 -1 734 291 101 78 chr20 7972857 7973072 -64180810 - L3 LINE CR1 -460 1117 873 2460 61 13 16 chr20 7975004 7975315 -64178567 - AluSp SINE Alu -3 310 1 1923 138 28 7 chr20 7975556 7975847 -64178035 + AluSx SINE Alu 1 297 -15 1030 197 56 66 chr20 7976024 7976344 -64177538 - L1ME2 LINE L1 -24 6140 5824 2423 82 0 0 chr20 7977374 7977677 -64176205 - AluSc SINE Alu -6 303 1 306 277 0 11 chr20 7979902 7979996 -64173886 + (CGG)n Simple_repeat Simple_repeat 3 95 0 369 0 0 0 chr20 7983943 7983984 -64169898 + (T)n Simple_repeat Simple_repeat 1 41 0 216 0 0 0 chr20 7985415 7985439 -64168443 + (T)n Simple_repeat Simple_repeat 1 24 0 351 0 0 0 chr20 7989119 7989158 -64164724 + (TG)n Simple_repeat Simple_repeat 2 40 0 686 340 65 39 chr20 7991433 7992128 -64161754 + L2 LINE L2 2286 2997 -275 252 0 0 0 chr20 7993944 7993972 -64159910 + (A)n Simple_repeat Simple_repeat 1 28 0 409 327 125 11 chr20 7994123 7994395 -64159487 + L1ME3A LINE L1 5254 5556 -2252 1191 207 212 16 chr20 7995210 7995592 -64158290 + LTR16A1 LTR ERVL 1 457 0 1552 168 54 7 chr20 7996152 7996449 -64157433 - AluJo SINE Alu -1 311 1 207 0 0 0 chr20 7996636 7996659 -64157223 + (T)n Simple_repeat Simple_repeat 1 23 0 385 206 23 6 chr20 7998019 7998114 -64155768 - MER5A DNA MER1_type -80 109 1 401 307 123 0 chr20 7998127 7998290 -64155592 + MER5A DNA MER1_type 6 188 -1 272 285 190 15 chr20 8002366 8002503 -64151379 - MER5B DNA MER1_type -17 161 1 251 342 107 20 chr20 8002520 8002716 -64151166 + MIR SINE MIR 14 226 -36 726 191 143 42 chr20 8005860 8006049 -64147833 + MER3 DNA MER1_type 1 208 -1 2018 78 3 72 chr20 8006690 8007010 -64146872 - AluSp SINE Alu -14 299 2 351 0 0 0 chr20 8009216 8009255 -64144627 + (TG)n Simple_repeat Simple_repeat 1 39 0 254 206 255 29 chr20 8009255 8009349 -64144533 + MER5A DNA MER1_type 37 157 -32 * 528 138 32 0 chr20 8009288 8009382 -64144500 - MER5A DNA MER1_type -83 106 10 932 135 65 18 chr20 8009409 8009579 -64144303 + MER5B DNA MER1_type 1 178 0 1163 194 24 0 chr20 8010444 8010650 -64143232 + MER58A DNA MER1_type 6 216 -8 367 192 323 6 chr20 8010704 8010871 -64143011 + L1ME3A LINE L1 5943 6162 -8 279 259 49 0 chr20 8011237 8011318 -64142564 - MLT1G1 LTR MaLR -18 577 493 255 222 61 50 chr20 8011424 8011523 -64142359 - MLT1I LTR MaLR -263 146 47 24 32 0 0 chr20 8014501 8014532 -64139350 + AT_rich Low_complexity Low_complexity 1 31 0 23 54 0 0 chr20 8015508 8015545 -64138337 + AT_rich Low_complexity Low_complexity 1 37 0 286 309 29 73 chr20 8017561 8017697 -64136185 + MER5A DNA MER1_type 59 188 -1 610 293 22 17 chr20 8019290 8019471 -64134411 - MIR3 SINE MIR -10 198 17 267 286 0 0 chr20 8020736 8020799 -64133083 + MIR SINE MIR 9 71 -191 390 254 95 32 chr20 8020837 8020963 -64132919 + MIR SINE MIR 19 152 -110 2172 195 114 56 chr20 8021154 8021743 -64132139 + MLT1E3 LTR MaLR 2 624 0 258 95 0 0 chr20 8023332 8023374 -64130508 + (TG)n Simple_repeat Simple_repeat 2 43 0 309 285 250 21 chr20 8024430 8024574 -64129308 - MER5B DNA MER1_type 0 178 2 363 295 16 33 chr20 8024667 8024789 -64129093 - MIR SINE MIR -64 144 25 2284 55 3 61 chr20 8027199 8027525 -64126357 + AluY SINE Alu 1 307 -4 334 219 372 0 chr20 8029559 8029696 -64124186 - MER5A DNA MER1_type 0 189 2 189 260 115 31 chr20 8031899 8031995 -64121887 - MIR SINE MIR -59 203 100 2343 61 0 7 chr20 8032677 8032974 -64120908 + AluY SINE Alu 1 295 -16 23 0 0 0 chr20 8034075 8034098 -64119784 + AT_rich Low_complexity Low_complexity 1 23 0 357 125 0 0 chr20 8034298 8034354 -64119528 + (A)n Simple_repeat Simple_repeat 1 56 0 2019 147 40 0 chr20 8035591 8035917 -64117965 + AluJo SINE Alu 1 338 0 426 294 37 7 chr20 8036155 8036291 -64117591 - MER5A DNA MER1_type -22 167 28 338 240 100 33 chr20 8036362 8036512 -64117370 + MER5A DNA MER1_type 7 166 -23 1365 272 155 42 chr20 8036638 8037097 -64116785 - L2 LINE L2 -90 3223 2818 389 36 0 18 chr20 8037097 8037153 -64116729 + (TTTA)n Simple_repeat Simple_repeat 2 56 0 1365 272 155 42 chr20 8037153 8037508 -64116374 - L2 LINE L2 -495 2818 2505 1373 172 50 88 chr20 8037508 8037885 -64115997 + MLT1A1 LTR MaLR 1 363 -2 1365 272 155 42 chr20 8037885 8038338 -64115544 - L2 LINE L2 -808 2505 1826 977 216 86 27 chr20 8038392 8038693 -64115189 - MER33 DNA MER1_type -5 319 1 241 158 0 53 chr20 8038693 8038750 -64115132 - L2 LINE L2 -1516 1798 1745 25 0 0 28 chr20 8040668 8040692 -64113190 + AT_rich Low_complexity Low_complexity 1 25 -10 2007 115 21 0 chr20 8040692 8040971 -64112911 + AluSp SINE Alu 1 285 -28 25 0 0 28 chr20 8040971 8040982 -64112900 + AT_rich Low_complexity Low_complexity 25 35 0 306 305 25 8 chr20 8041657 8041775 -64112107 + MIR SINE MIR 41 160 -102 788 264 94 8 chr20 8041998 8042252 -64111630 + MLT1K LTR MaLR 313 588 0 227 209 113 17 chr20 8042965 8043080 -64110802 - MIR SINE MIR -116 146 21 201 74 0 0 chr20 8044431 8044458 -64109424 + (TCC)n Simple_repeat Simple_repeat 2 28 0 1916 75 0 36 chr20 8044838 8045090 -64108792 - AluY SINE Alu -10 301 59 2003 147 40 0 chr20 8095938 8096265 -64057617 + AluJo SINE Alu 1 339 0 493 287 37 7 chr20 8096503 8096639 -64057243 - MER5A DNA MER1_type -22 167 28 387 240 100 33 chr20 8096710 8096860 -64057022 + MER5A DNA MER1_type 7 166 -23 1608 269 152 47 chr20 8096986 8097445 -64056437 - L2 LINE L2 -90 3223 2814 396 0 0 0 chr20 8097445 8097489 -64056393 + (TTTA)n Simple_repeat Simple_repeat 1 44 0 1608 269 152 47 chr20 8097489 8097855 -64056027 - L2 LINE L2 -499 2814 2488 1485 172 50 88 chr20 8097855 8098232 -64055650 + MLT1A1 LTR MaLR 1 363 -2 1608 269 152 47 chr20 8098232 8098685 -64055197 - L2 LINE L2 -825 2488 1826 999 216 86 27 chr20 8098739 8099040 -64054842 - MER33 DNA MER1_type -5 319 1 258 158 0 53 chr20 8099040 8099097 -64054785 - L2 LINE L2 -1516 1798 1745 24 0 0 0 chr20 8101016 8101040 -64052842 + AT_rich Low_complexity Low_complexity 1 24 0 1683 114 25 0 chr20 8101040 8101276 -64052606 + AluSx SINE Alu 1 242 -70 265 286 0 0 chr20 8101699 8101762 -64052120 + MIR SINE MIR 9 71 -191 385 254 95 32 chr20 8101800 8101926 -64051956 + MIR SINE MIR 19 152 -110 2374 194 114 56 chr20 8102117 8102706 -64051176 + MLT1E3 LTR MaLR 2 624 0 258 95 0 0 chr20 8104295 8104337 -64049545 + (TG)n Simple_repeat Simple_repeat 2 43 0 295 285 250 21 chr20 8105393 8105537 -64048345 - MER5B DNA MER1_type 0 178 2 355 295 16 33 chr20 8105630 8105752 -64048130 - MIR SINE MIR -64 144 25 2313 61 3 67 chr20 8108047 8108374 -64045508 + AluY SINE Alu 1 306 -5 323 234 372 0 chr20 8110408 8110545 -64043337 - MER5A DNA MER1_type 0 189 2 2449 61 0 7 chr20 8113525 8113822 -64040060 + AluY SINE Alu 1 295 -16 23 0 0 0 chr20 8114923 8114946 -64038936 + AT_rich Low_complexity Low_complexity 1 23 0 357 125 0 0 chr20 8115146 8115202 -64038680 + (A)n Simple_repeat Simple_repeat 1 56 0 348 298 33 33 chr20 8116121 8116272 -64037610 + MIR SINE MIR 10 160 -102 786 264 94 8 chr20 8116495 8116749 -64037133 + MLT1K LTR MaLR 313 588 0 266 209 113 17 chr20 8117465 8117580 -64036302 - MIR SINE MIR -116 146 21 201 74 0 0 chr20 8118931 8118958 -64034924 + (TCC)n Simple_repeat Simple_repeat 2 28 0 184 420 0 0 chr20 8119021 8119102 -64034780 + MIR SINE MIR 65 145 -117 2430 68 0 29 chr20 8119338 8119648 -64034234 - AluY SINE Alu -10 301 1 205 358 11 62 chr20 8119648 8119827 -64034055 - MIR SINE MIR -46 216 47 278 366 45 0 chr20 8122638 8122750 -64031132 + L2 LINE L2 3147 3263 -9 23 0 0 0 chr20 8122902 8122925 -64030957 + AT_rich Low_complexity Low_complexity 1 23 0 390 127 0 0 chr20 8125680 8125751 -64028131 + (GA)n Simple_repeat Simple_repeat 2 72 0 26 0 0 0 chr20 8128201 8128227 -64025655 + AT_rich Low_complexity Low_complexity 1 26 0 1444 146 158 23 chr20 8128335 8128595 -64025287 + AluJo SINE Alu 1 295 -7 243 372 0 0 chr20 8129390 8129468 -64024414 + L2 LINE L2 3230 3307 -6 2063 118 18 0 chr20 8129468 8129748 -64024134 + AluSx SINE Alu 1 285 -27 1012 263 226 5 chr20 8130140 8130517 -64023365 + L1ME3A LINE L1 5454 5913 -257 1855 139 10 20 chr20 8131504 8131798 -64022084 + AluJo SINE Alu 1 291 -21 547 276 162 42 chr20 8133817 8134273 -64019609 - L1MC4 LINE L1 -7 8035 7525 1756 179 7 3 chr20 8134288 8134579 -64019303 - AluJo SINE Alu -20 292 1 2404 91 3 3 chr20 8135100 8135409 -64018473 + AluSc SINE Alu 1 309 0 468 296 125 19 chr20 8136840 8136855 -64017027 - L3b LINE CR1 -208 1375 1363 648 276 167 14 chr20 8136855 8137148 -64016734 - MER102b DNA MER1_type -2 339 2 468 296 125 19 chr20 8137148 8137348 -64016534 - L3b LINE CR1 -220 1363 1137 2092 119 3 3 chr20 8137371 8137697 -64016185 + AluSx SINE Alu 1 326 0 261 245 0 0 chr20 8137911 8137960 -64015922 - L2 LINE L2 0 3313 3265 328 278 90 39 chr20 8138092 8138347 -64015535 - L1ME4a LINE L1 0 6121 5854 364 260 67 83 chr20 8138515 8138827 -64015055 - L1ME4a LINE L1 -1375 4771 4465 2865 155 33 62 chr20 8138934 8140438 -64013444 - L1MA9 LINE L1 0 6312 4733 1048 290 142 35 chr20 8140412 8141320 -64012562 - L1ME4a LINE L1 -1856 4290 3286 * 1229 232 64 48 chr20 8141449 8141841 -64012041 + MER93a LTR ERV1 5 402 0 2298 109 0 25 chr20 8142141 8142461 -64011421 + AluSx SINE Alu 1 312 0 243 19 113 38 chr20 8142461 8142514 -64011368 + GA-rich Low_complexity Low_complexity 4 60 0 180 200 0 0 chr20 8142517 8142552 -64011330 - L2 LINE L2 -1039 2275 2241 259 267 114 69 chr20 8143350 8143498 -64010384 - MER5A DNA MER1_type -25 153 1 1258 235 74 70 chr20 8144411 8145044 -64008838 + L1MC5 LINE L1 7320 7955 -6 1606 139 12 36 chr20 8146146 8146398 -64007484 - AluJo SINE Alu -66 246 1 4870 161 31 19 chr20 8148226 8148306 -64005576 + L1MB8 LINE L1 4730 4808 -1370 2349 93 7 0 chr20 8148306 8148616 -64005266 + AluSx SINE Alu 1 312 0 4870 161 31 19 chr20 8148616 8149971 -64003911 + L1MB8 LINE L1 4808 6178 0 1620 189 3 18 chr20 8150311 8150597 -64003285 - AluJo SINE Alu -30 282 1 221 240 13 27 chr20 8151267 8151342 -64002540 + (CATATA)n Simple_repeat Simple_repeat 2 75 0 2178 112 17 0 chr20 8153059 8153346 -64000536 + AluSp SINE Alu 1 292 -21 247 183 104 78 chr20 8155750 8155865 -63998017 + MIR SINE MIR 22 139 -123 188 241 170 92 chr20 8156296 8156590 -63997292 - L2 LINE L2 -42 3230 2914 1730 182 0 10 chr20 8156899 8157190 -63996692 + AluJb SINE Alu 1 288 -24 2346 99 3 0 chr20 8157203 8157506 -63996376 + AluSq SINE Alu 1 304 -9 1813 152 53 70 chr20 8158033 8158535 -63995347 + MLT1B LTR MaLR 1 467 0 2175 83 73 7 chr20 8158567 8158856 -63995026 + AluSq SINE Alu 1 308 -5 284 306 102 25 chr20 8158889 8159085 -63994797 + HERV16 LTR ERVL 1729 1939 -3057 1095 366 60 8 chr20 8159158 8159907 -63993975 + HERV16 LTR ERVL 2092 2879 -2885 1446 298 97 30 chr20 8160181 8160408 -63993474 + HERV16 LTR ERVL 3776 3986 -1668 1156 195 75 101 chr20 8160408 8160783 -63993099 - MLT1A1 LTR MaLR 0 365 1 1446 298 97 30 chr20 8160783 8161517 -63992365 + HERV16 LTR ERVL 3986 4785 -869 252 0 0 0 chr20 8161720 8161748 -63992134 + (A)n Simple_repeat Simple_repeat 1 28 0 431 286 133 5 chr20 8161772 8161975 -63991907 + HERV16 LTR ERVL 5152 5380 -384 385 311 6 37 chr20 8162322 8162483 -63991399 + LTR67 LTR ERVL 2 157 -400 466 191 32 0 chr20 8162663 8162757 -63991125 + LTR67 LTR ERVL 419 515 -42 250 244 0 0 chr20 8163105 8163179 -63990703 + L1MC/D LINE L1 5444 5517 -2291 24 0 0 0 chr20 8163426 8163450 -63990432 + AT_rich Low_complexity Low_complexity 1 24 0 4707 146 20 20 chr20 8164062 8165322 -63988560 + L1MA5 LINE L1 4589 5844 -456 4191 165 33 37 chr20 8165322 8166110 -63987772 + LTR1 LTR ERV1 1 785 0 4707 146 20 20 chr20 8166110 8166161 -63987721 + L1MA5 LINE L1 5844 5894 -406 2066 135 45 6 chr20 8166143 8166476 -63987406 + L1PB1 LINE L1 5768 6113 -38 * 2049 156 48 23 chr20 8166544 8166941 -63986941 + L1MA5 LINE L1 5894 6300 0 293 250 26 0 chr20 8167535 8167611 -63986271 + MIR SINE MIR 77 154 -108 338 222 131 0 chr20 8167908 8168007 -63985875 - Charlie8 DNA MER1_type -2245 172 61 1992 157 0 7 chr20 8169669 8169974 -63983908 - AluJb SINE Alu -9 303 1 306 276 37 0 chr20 8171071 8171175 -63982707 - MIR3 SINE MIR -6 202 93 859 184 72 68 chr20 8172414 8172621 -63981261 + MER3 DNA MER1_type 2 209 0 2946 216 111 31 chr20 8172852 8174040 -63979842 + L1ME2 LINE L1 4881 6164 0 556 227 106 71 chr20 8174212 8174410 -63979472 - MER112 DNA MER1_type -54 206 2 1699 229 46 15 chr20 8174526 8174985 -63978897 - Charlie4a DNA MER1_type -9 499 27 216 97 0 0 chr20 8175612 8175643 -63978239 + (A)n Simple_repeat Simple_repeat 1 31 0 538 281 96 15 chr20 8178172 8178371 -63975511 - MIR SINE MIR 0 262 48 333 306 46 0 chr20 8179173 8179281 -63974601 - MIR SINE MIR 0 262 150 2509 54 0 3 chr20 8179493 8179790 -63974092 + AluY SINE Alu 1 296 -15 268 308 44 11 chr20 8179896 8179987 -63973895 + MIR3 SINE MIR 102 195 -13 185 263 51 102 chr20 8180096 8180233 -63973649 + L2 LINE L2 3138 3267 -5 287 301 153 31 chr20 8181279 8181475 -63972407 + MIR SINE MIR 37 256 -6 786 218 16 57 chr20 8182897 8183090 -63970792 + MER5A DNA MER1_type 5 189 0 1796 162 0 10 chr20 8183345 8183641 -63970241 + AluJb SINE Alu 1 293 -19 261 394 8 0 chr20 8184107 8184234 -63969648 + L3 LINE CR1 349 476 -1101 * 2268 233 95 20 chr20 8184231 8184865 -63969017 + L2 LINE L2 1853 2533 -781 271 149 0 0 chr20 8184864 8184911 -63968971 + L2 LINE L2 3263 3309 -4 * 814 326 159 38 chr20 8184921 8185788 -63968094 + L3 LINE CR1 466 1437 -140 400 316 42 36 chr20 8186082 8186250 -63967632 + MIR SINE MIR 21 189 -73 838 151 68 92 chr20 8186367 8186573 -63967309 + MER3 DNA MER1_type 5 205 -4 369 125 0 16 chr20 8187710 8187774 -63966108 - MER5A DNA MER1_type 0 189 127 854 113 25 12 chr20 8187810 8187970 -63965912 + GA-rich Low_complexity Low_complexity 3 164 0 655 212 45 0 chr20 8187979 8188111 -63965771 - MER5A DNA MER1_type -51 138 1 826 197 22 28 chr20 8188120 8188298 -63965584 + MER5B DNA MER1_type 2 178 0 2262 104 0 3 chr20 8189205 8189502 -63964380 + AluSx SINE Alu 1 296 -16 764 209 133 36 chr20 8189544 8189740 -63964142 + MER20 DNA MER1_type 5 219 0 866 149 0 22 chr20 8191653 8191787 -63962095 - FLAM_C SINE Alu -2 131 1 2238 111 3 0 chr20 8192411 8192708 -63961174 + AluSx SINE Alu 1 298 -14 232 251 52 139 chr20 8192820 8193068 -63960814 + L2 LINE L2 2543 2748 -566 436 290 15 8 chr20 8193068 8193199 -63960683 - MER94 DNA DNA -1 133 2 232 251 52 139 chr20 8193199 8193332 -63960550 + L2 LINE L2 2748 2891 -423 230 246 33 16 chr20 8193692 8193753 -63960129 + L2 LINE L2 3247 3308 -5 316 315 71 22 chr20 8194000 8194112 -63959770 + L1M4 LINE L1 2274 2379 -3767 1992 166 0 0 chr20 8194112 8194414 -63959468 + AluJb SINE Alu 1 302 -10 1968 121 6 54 chr20 8194414 8194729 -63959153 + AluSx SINE Alu 1 300 -12 316 315 71 22 chr20 8194729 8194799 -63959083 + L1M4 LINE L1 2378 2466 -3680 2174 125 0 3 chr20 8194957 8195253 -63958629 + AluSg SINE Alu 1 295 -15 803 109 94 2 chr20 8195662 8195817 -63958065 - L1MA7 LINE L1 -6 6285 6122 250 291 29 39 chr20 8195821 8195924 -63957958 - Charlie7 DNA MER1_type -2509 103 2 817 321 64 13 chr20 8196153 8196542 -63957340 + L2 LINE L2 2896 3304 -9 2274 117 0 7 chr20 8198417 8198725 -63955157 - AluSx SINE Alu -6 306 1 23 0 0 0 chr20 8198935 8198958 -63954924 + AT_rich Low_complexity Low_complexity 1 23 0 306 148 19 0 chr20 8199776 8199830 -63954052 - L1MC4 LINE L1 0 8042 7988 253 306 130 9 chr20 8200805 8200913 -63952969 + L2 LINE L2 3152 3272 0 341 242 0 0 chr20 8201009 8201075 -63952807 + FAM SINE Alu 93 158 -17 1825 161 14 3 chr20 8201078 8201363 -63952519 - AluJb SINE Alu -24 288 1 413 173 0 0 chr20 8201398 8201473 -63952409 + MLT1D LTR MaLR 431 505 0 1085 252 109 58 chr20 8202098 8202730 -63951152 + HAL1 LINE L1 1665 2328 -179 349 359 28 0 chr20 8203008 8203150 -63950732 - L2 LINE L2 -616 2698 2553 21 0 0 0 chr20 8203429 8203450 -63950432 + AT_rich Low_complexity Low_complexity 1 21 0 359 267 52 17 chr20 8204336 8204452 -63949430 - L2 LINE L2 0 3272 3153 186 349 0 0 chr20 8206488 8206554 -63947328 + MIR SINE MIR 73 138 -70 528 247 89 108 chr20 8206589 8207006 -63946876 + HAL1 LINE L1 1756 2164 -343 415 208 15 39 chr20 8207050 8207180 -63946702 + HAL1 LINE L1 2304 2430 -77 5158 157 29 32 chr20 8207236 8207682 -63946200 + L1MB7 LINE L1 4878 5324 -860 2346 84 10 0 chr20 8207682 8207990 -63945892 + AluY SINE Alu 1 311 0 5158 157 29 32 chr20 8207990 8208845 -63945037 + L1MB7 LINE L1 5324 6183 -1 233 265 0 0 chr20 8208850 8208899 -63944983 + L1ME2 LINE L1 6059 6107 -57 313 182 15 0 chr20 8208925 8208991 -63944891 + L1MB8 LINE L1 6102 6168 -10 1729 173 26 7 chr20 8209162 8209479 -63944403 + AluJb SINE Alu 1 501 -35 1060 68 28 17 chr20 8209479 8209655 -63944227 + (GGAA)n Simple_repeat Simple_repeat 3 180 0 1729 173 26 7 chr20 8209655 8209692 -63944190 + AluJb SINE Alu 501 536 0 1339 114 25 10 chr20 8209845 8210047 -63943835 - L1PA11 LINE L1 -1 6173 5969 281 299 73 55 chr20 8210118 8210282 -63943600 - MIR3 SINE MIR -6 202 36 317 256 104 30 chr20 8210351 8210515 -63943367 - MIR SINE MIR -70 192 17 416 276 116 74 chr20 8211422 8211759 -63942123 + MARNA DNA Mariner 21 371 -215 1690 198 3 0 chr20 8211844 8212152 -63941730 + AluJb SINE Alu 1 309 -3 2207 128 0 0 chr20 8212647 8212952 -63940930 + AluSq SINE Alu 1 305 -8 663 301 34 10 chr20 8214660 8214866 -63939016 + MIR SINE MIR 23 233 -29 575 196 0 39 chr20 8215096 8215198 -63938684 + AluJ/FLAM SINE Alu 2 99 -213 683 78 39 30 chr20 8215209 8215447 -63938435 + (TA)n Simple_repeat Simple_repeat 1 240 0 808 169 104 13 chr20 8215460 8215614 -63938268 + AluJo SINE Alu 125 292 -20 321 190 63 38 chr20 8215635 8215714 -63938168 + MER94 DNA DNA 2 82 -52 1037 250 5 0 chr20 8215784 8215996 -63937886 + MER58A DNA MER1_type 12 224 0 199 258 180 0 chr20 8216184 8216273 -63937609 + L3 LINE CR1 1181 1285 -292 245 250 0 95 chr20 8216320 8216436 -63937446 + MIR SINE MIR 107 211 -51 240 202 138 83 chr20 8216469 8216578 -63937304 + L3 LINE CR1 1267 1381 -196 2254 93 0 3 chr20 8217129 8217462 -63936420 + AluSc SINE Alu 2 333 0 232 188 43 140 chr20 8217867 8218053 -63935829 - L1ME4a LINE L1 -186 5935 5768 1294 164 102 36 chr20 8218060 8218335 -63935547 + AluJo SINE Alu 6 298 -14 290 286 0 0 chr20 8218364 8218434 -63935448 - L1ME4a LINE L1 -383 5738 5669 254 330 51 25 chr20 8218648 8218766 -63935116 + MIR3 SINE MIR 65 185 -23 325 125 0 28 chr20 8220055 8220127 -63933755 + (TA)n Simple_repeat Simple_repeat 1 70 0 365 203 8 98 chr20 8220185 8220308 -63933574 + L1ME4a LINE L1 5966 6077 -44 238 323 52 21 chr20 8220382 8220478 -63933404 - L2 LINE L2 -22 3250 3152 307 247 177 51 chr20 8220569 8220826 -63933056 + L2 LINE L2 2754 3052 -261 350 219 65 191 chr20 8220841 8220961 -63932921 + L2 LINE L2 2939 3072 -241 1151 126 61 40 chr20 8220961 8221159 -63932723 + L1MA9 LINE L1 6111 6312 0 350 219 65 191 chr20 8221159 8221421 -63932461 + L2 LINE L2 3072 3273 -40 231 294 91 75 chr20 8221438 8221625 -63932257 + L2 LINE L2 3123 3312 -1 25 51 0 0 chr20 8222191 8222230 -63931652 + AT_rich Low_complexity Low_complexity 1 39 0 182 186 47 23 chr20 8222290 8222333 -63931549 - L2 LINE L2 -830 2484 2441 1853 176 75 19 chr20 8223981 8224424 -63929458 + MLT1C LTR MaLR 3 463 -4 1059 267 123 35 chr20 8225117 8225751 -63928131 - L2 LINE L2 -8 3305 2628 1876 167 6 6 chr20 8227252 8227563 -63926319 - AluJo SINE Alu -1 311 1 2041 116 24 3 chr20 8227612 8227904 -63925978 + AluSx SINE Alu 10 307 -5 506 269 66 33 chr20 8228515 8228697 -63925185 - MER112 DNA MER1_type -6 254 67 24 0 0 0 chr20 8228926 8228950 -63924932 + AT_rich Low_complexity Low_complexity 1 24 0 222 118 0 0 chr20 8229334 8229368 -63924514 + (A)n Simple_repeat Simple_repeat 1 34 0 554 204 78 24 chr20 8229876 8230043 -63923839 - MER104 DNA MER2_type -3 177 2 405 324 200 25 chr20 8230477 8230832 -63923050 + HAL1 LINE L1 1231 1647 -860 357 247 101 95 chr20 8231221 8231607 -63922275 + MLT1L LTR MaLR 109 486 -25 326 254 75 94 chr20 8231690 8231726 -63922156 + L1ME3A LINE L1 2439 2474 -4066 866 121 102 19 chr20 8231726 8231883 -63921999 + L1MA4A LINE L1 6133 6302 -1 326 254 75 94 chr20 8231883 8232047 -63921835 + L1ME3A LINE L1 2474 2635 -3905 299 267 173 101 chr20 8232134 8232908 -63920974 + L1ME3A LINE L1 2594 3311 -3229 1458 145 92 0 chr20 8232908 8233191 -63920691 - L1MA7 LINE L1 -2 6289 5981 299 267 173 101 chr20 8233191 8234036 -63919846 + L1ME3A LINE L1 3311 4094 -2446 868 176 0 0 chr20 8234036 8234167 -63919715 + FLAM_C SINE Alu 3 133 0 299 267 173 101 chr20 8234167 8234930 -63918952 + L1ME3A LINE L1 4094 5176 -1364 869 143 0 0 chr20 8234930 8235056 -63918826 + FLAM_C SINE Alu 3 128 -5 299 267 173 101 chr20 8235056 8235225 -63918657 + L1ME3A LINE L1 5176 5331 -1209 318 262 106 14 chr20 8235335 8235476 -63918406 + L1ME3A LINE L1 5494 5647 -893 701 298 83 41 chr20 8235500 8236076 -63917806 + L1ME3A LINE L1 5720 6340 -224 303 269 124 31 chr20 8236379 8236636 -63917246 + HAL1b LINE L1 202 482 -866 29 60 0 0 chr20 8237730 8237780 -63916102 + AT_rich Low_complexity Low_complexity 1 50 0 365 293 43 21 chr20 8239346 8239478 -63914404 - MIR3 SINE MIR -9 199 62 1969 170 93 36 chr20 8239478 8239920 -63913962 - MLT1C LTR MaLR 0 467 1 210 229 220 28 chr20 8241468 8241577 -63912305 + MIR SINE MIR 101 230 -32 24 0 0 0 chr20 8241828 8241852 -63912030 + AT_rich Low_complexity Low_complexity 1 24 0 406 179 15 0 chr20 8241934 8242001 -63911881 + Tigger2 DNA MER2_type 1 68 -2650 * 2405 124 27 105 chr20 8241991 8242398 -63911484 + Tigger2 DNA MER2_type 2273 2638 -80 1876 112 13 64 chr20 8242398 8242711 -63911171 - AluSx SINE Alu -15 297 1 2405 124 27 105 chr20 8242711 8242787 -63911095 + Tigger2 DNA MER2_type 2638 2718 0 1303 199 65 78 chr20 8243801 8244249 -63909633 - MER39 LTR ERV1 0 707 266 39 60 0 0 chr20 8244396 8244463 -63909419 + AT_rich Low_complexity Low_complexity 1 67 0 1764 159 7 7 chr20 8244610 8244916 -63908966 + AluSx SINE Alu 1 306 0 546 239 78 0 chr20 8245149 8245291 -63908591 - L1ME1 LINE L1 -5 6161 6009 1462 253 119 26 chr20 8245882 8246376 -63907506 + MLT1F LTR MaLR 3 542 0 298 284 43 9 chr20 8246536 8246652 -63907230 + HAL1b LINE L1 73 192 -1156 630 150 0 0 chr20 8246691 8246791 -63907091 - L1P5 LINE L1 -405 5751 5652 464 127 13 0 chr20 8246792 8246871 -63907011 + L1PB4 LINE L1 6069 6148 -8 1112 259 13 23 chr20 8246943 8247248 -63906634 + HAL1b LINE L1 279 580 -768 479 241 158 43 chr20 8247265 8247608 -63906274 + HAL1b LINE L1 884 1275 -73 1699 164 3 39 chr20 8247608 8247920 -63905962 - AluJb SINE Alu -11 301 1 479 241 158 43 chr20 8247920 8247950 -63905932 + HAL1b LINE L1 1275 1300 -48 2140 121 0 0 chr20 8248010 8248308 -63905574 - AluSc SINE Alu -11 298 1 2267 84 17 3 chr20 8248385 8248683 -63905199 + AluSg SINE Alu 1 302 -8 21 57 0 0 chr20 8249428 8249463 -63904419 + AT_rich Low_complexity Low_complexity 1 35 0 280 335 105 0 chr20 8249555 8249707 -63904175 + MIR SINE MIR 21 188 -74 2174 100 3 7 chr20 8249833 8250133 -63903749 + AluSx SINE Alu 1 299 -13 268 280 203 17 chr20 8250290 8250408 -63903474 - MIR SINE MIR -13 249 110 1102 75 0 0 chr20 8250465 8250598 -63903284 + AluSq/x SINE Alu 1 133 -180 1916 110 64 0 chr20 8250602 8250866 -63903016 + AluSg SINE Alu 15 295 -15 662 132 0 0 chr20 8253817 8253908 -63899974 + AluSx SINE Alu 2 92 -220 2257 112 3 0 chr20 8253909 8254204 -63899678 + AluSx SINE Alu 1 296 -16 1634 100 0 14 chr20 8254209 8254429 -63899453 + AluSx SINE Alu 84 300 -12 239 276 81 11 chr20 8254547 8254634 -63899248 - MIR SINE MIR 0 262 170 260 152 43 0 chr20 8254663 8254709 -63899173 - MER5A DNA MER1_type -141 48 1 303 262 67 47 chr20 8255314 8255463 -63898419 - MIR SINE MIR -107 155 4 2348 88 0 0 chr20 8255502 8255797 -63898085 + AluY SINE Alu 1 295 -16 259 275 25 12 chr20 8255799 8255879 -63898003 - MIR3 SINE MIR -5 203 123 555 286 120 15 chr20 8255913 8256331 -63897551 + MLT1H LTR MaLR 14 480 -75 182 313 47 0 chr20 8256713 8256777 -63897105 + L2 LINE L2 3241 3307 -6 265 393 16 22 chr20 8256950 8257133 -63896749 - MIR SINE MIR -54 208 27 1573 184 7 39 chr20 8358409 8358719 -63795163 + AluJo SINE Alu 1 300 -12 3744 143 32 18 chr20 8359040 8359725 -63794157 + L1MA7 LINE L1 5546 6240 -51 1573 241 47 3 chr20 8360384 8360765 -63793117 + MLT1H LTR MaLR 9 406 -143 279 275 29 0 chr20 8361303 8361372 -63792510 + polypurine Low_complexity Low_complexity 5 75 0 28 29 0 0 chr20 8361622 8361657 -63792225 + AT_rich Low_complexity Low_complexity 1 35 0 241 250 73 0 chr20 8361860 8361928 -63791954 - L1ME4a LINE L1 -28 6093 6021 23 0 0 0 chr20 8361936 8361959 -63791923 + AT_rich Low_complexity Low_complexity 1 23 0 22 70 0 0 chr20 8362955 8362998 -63790884 + AT_rich Low_complexity Low_complexity 1 43 0 658 253 172 59 chr20 8364374 8364746 -63789136 + LTR33A LTR ERVL 101 514 -9 2357 128 16 13 chr20 8364842 8365224 -63788658 + L1PA15 LINE L1 5783 6165 0 511 48 10 0 chr20 8366508 8366581 -63787301 + L1PA16 LINE L1 5791 5868 -304 384 268 46 26 chr20 8366964 8367117 -63786765 + MIR SINE MIR 107 262 0 611 287 65 4 chr20 8367359 8367589 -63786293 - LTR16A LTR ERVL -189 261 18 181 286 36 0 chr20 8368344 8368400 -63785482 - MIR3 SINE MIR 0 208 151 233 347 70 19 chr20 8368482 8368753 -63785129 - L3 LINE CR1 -203 1374 1090 202 109 65 0 chr20 8368806 8368852 -63785030 + (TA)n Simple_repeat Simple_repeat 1 49 0 3801 144 16 15 chr20 8370179 8370844 -63783038 + L1MA7 LINE L1 5535 6200 -91 265 185 74 12 chr20 8370813 8370894 -63782988 + L1MA9 LINE L1 6222 6307 -5 * 2118 95 0 0 chr20 8371105 8371368 -63782514 - AluSx SINE Alu -21 291 29 462 298 133 9 chr20 8371716 8371896 -63781986 + MIR SINE MIR 70 262 0 996 181 9 37 chr20 8371996 8372211 -63781671 + MER3 DNA MER1_type 1 209 0 878 268 105 28 chr20 8373277 8373706 -63780176 + L1ME4a LINE L1 5616 6077 -44 881 216 0 6 chr20 8373819 8373995 -63779887 + L1PB3 LINE L1 5980 6154 0 381 276 43 9 chr20 8374754 8374870 -63779012 + L2 LINE L2 3193 3312 -1 195 42 0 0 chr20 8374875 8374899 -63778983 + (TGGA)n Simple_repeat Simple_repeat 2 25 0 1174 219 38 35 chr20 8375222 8375719 -63778163 + MLT1H1 LTR MaLR 3 555 0 1059 291 94 31 chr20 8375943 8376421 -63777461 + MLT1G1 LTR MaLR 88 595 0 387 59 0 0 chr20 8377726 8377777 -63776105 - MADE1 DNA Mariner -1 79 29 228 128 26 0 chr20 8377792 8377831 -63776051 - L1P LINE L1 -1194 4952 4913 711 215 37 23 chr20 8377937 8378155 -63775727 + L1ME LINE L1 5429 5636 -534 770 190 0 0 chr20 8378155 8378343 -63775539 + FLAM_C SINE Alu 2 189 0 230 98 24 0 chr20 8378370 8378411 -63775471 - L1MB1 LINE L1 -24 6144 6103 6487 184 27 9 chr20 8378440 8380533 -63773349 - L1MB1 LINE L1 -36 6132 4001 434 179 142 0 chr20 8381232 8381338 -63772544 + MER3 DNA MER1_type 49 122 -87 1250 195 70 6 chr20 8381353 8381712 -63772170 + MER3 DNA MER1_type 2243 2624 0 256 331 70 86 chr20 8381839 8382096 -63771786 - L2 LINE L2 -2 3270 3018 2308 113 54 41 chr20 8382772 8383163 -63770719 - MER57A LTR ERV1 0 403 8 338 261 146 12 chr20 8383190 8383355 -63770527 + L2 LINE L2 1314 1500 -1814 4413 178 57 6 chr20 8383506 8384326 -63769556 + MER21B LTR ERV1 1 862 -1 450 307 118 16 chr20 8384412 8384592 -63769290 - L1MDa LINE L1 -4611 2110 1950 2223 100 0 13 chr20 8384592 8384891 -63768991 + AluSx SINE Alu 1 295 -17 450 307 118 16 chr20 8384891 8385425 -63768457 - L1MDa LINE L1 -4771 1950 1268 24 0 0 0 chr20 8385493 8385517 -63768365 + AT_rich Low_complexity Low_complexity 1 24 0 439 189 0 0 chr20 8386667 8386757 -63767125 - L1MA8 LINE L1 -5 6286 6197 244 294 143 0 chr20 8386902 8387014 -63766868 - MIR SINE MIR -62 146 34 192 193 35 35 chr20 8387033 8387090 -63766792 + MER5A DNA MER1_type 13 69 -120 267 225 0 0 chr20 8387647 8387718 -63766164 + (CATATA)n Simple_repeat Simple_repeat 2 72 0 1716 139 78 12 chr20 8387920 8388251 -63765631 + L1MA9 LINE L1 5959 6311 -1 27 49 0 0 chr20 8388251 8388292 -63765590 + AT_rich Low_complexity Low_complexity 1 41 0 24 0 0 0 chr20 8388472 8388496 -63765386 + AT_rich Low_complexity Low_complexity 1 24 0 274 179 0 0 chr20 8388631 8388670 -63765212 - AluJo SINE Alu -21 281 243 676 157 0 17 chr20 8388670 8388785 -63765097 - AluJo SINE Alu -154 158 46 1786 145 10 46 chr20 8389441 8389744 -63764138 + AluJo SINE Alu 5 296 -16 243 0 0 0 chr20 8392053 8392080 -63761802 + (TTTTTG)n Simple_repeat Simple_repeat 2 28 0 437 303 8 0 chr20 8392902 8393024 -63760858 + MER115 DNA AcHobo 25 147 -546 2364 195 33 0 chr20 8393039 8393491 -63760391 + MLT1C LTR MaLR 1 467 0 543 286 75 36 chr20 8393638 8393890 -63759992 + MER115 DNA AcHobo 360 621 -72 22 56 0 0 chr20 8394965 8395001 -63758881 + AT_rich Low_complexity Low_complexity 1 36 0 198 0 0 0 chr20 8395079 8395101 -63758781 + (A)n Simple_repeat Simple_repeat 1 22 0 294 157 57 14 chr20 8396473 8396543 -63757339 - MLT1I LTR MaLR -6 403 331 283 279 79 21 chr20 8396709 8396849 -63757033 - MLT1J2 LTR MaLR -286 164 17 185 26 0 0 chr20 8397387 8397614 -63756268 + AT_rich Low_complexity Low_complexity 1 227 0 576 293 61 0 chr20 8397831 8398012 -63755870 - MIR SINE MIR -26 236 45 2071 136 25 14 chr20 8398222 8398582 -63755300 - MSTB LTR MaLR -57 369 6 1077 151 26 0 chr20 8399029 8399221 -63754661 - L1PA13 LINE L1 -21 6142 5946 22 0 0 0 chr20 8399351 8399373 -63754509 + AT_rich Low_complexity Low_complexity 1 22 0 1493 122 9 5 chr20 8400305 8400519 -63753363 - AluSp SINE Alu -13 300 86 300 324 39 39 chr20 8400530 8400712 -63753170 + L3b LINE CR1 1271 1452 -131 489 336 24 45 chr20 8400941 8401230 -63752652 + L2 LINE L2 3006 3288 -25 621 111 0 0 chr20 8401716 8401806 -63752076 + MLT2C2 LTR ERVL 1 90 -374 492 99 0 0 chr20 8401841 8401912 -63751970 + (TA)n Simple_repeat Simple_repeat 2 72 0 442 146 101 0 chr20 8401957 8402046 -63751836 + MLT2C2 LTR ERVL 3 100 -364 2332 251 93 15 chr20 8403798 8404650 -63749232 - L1MC4 LINE L1 0 8042 7125 1738 154 89 31 chr20 8405739 8406264 -63747618 - MLT2A2 LTR ERVL 0 554 1 2819 7 0 0 chr20 8406600 8406906 -63746976 + AluYa5 SINE Alu 1 306 -5 827 229 17 6 chr20 8407044 8407219 -63746663 + MER45A DNA AcHobo 1 177 -1 1680 189 19 73 chr20 8407465 8407878 -63746004 - MSTD LTR MaLR 0 396 6 259 382 53 0 chr20 8408297 8408428 -63745454 - MIR3 SINE MIR -41 167 30 368 317 8 24 chr20 8408582 8408705 -63745177 - MIR3 SINE MIR -13 195 75 252 345 74 20 chr20 8409097 8409245 -63744637 + L3b LINE CR1 1223 1378 -205 350 46 62 0 chr20 8409849 8409914 -63743968 + (TAGA)n Simple_repeat Simple_repeat 1 69 0 292 185 200 0 chr20 8411805 8411870 -63742012 - L2 LINE L2 0 3272 3195 1087 206 14 106 chr20 8412269 8412702 -63741180 + LTR16A1 LTR ERVL 55 447 -10 3703 130 30 0 chr20 8412992 8413599 -63740283 - L1PB4 LINE L1 0 6156 5532 617 192 58 0 chr20 8413599 8413755 -63740127 + L1 LINE L1 5187 5351 -795 894 83 35 0 chr20 8413939 8414084 -63739798 + L1P5 LINE L1 5328 5477 -679 1065 150 20 36 chr20 8414090 8414337 -63739545 - L1MA4 LINE L1 -3 6297 6055 219 36 0 0 chr20 8415689 8415717 -63738165 + (TTGG)n Simple_repeat Simple_repeat 4 31 0 1066 186 0 10 chr20 8415724 8415928 -63737954 - L1PA16 LINE L1 -1 6165 5964 406 94 0 0 chr20 8415928 8415992 -63737890 + L1P5 LINE L1 5462 5525 -631 1233 258 122 0 chr20 8416035 8416454 -63737428 - L1ME2 LINE L1 -9 6155 5686 189 0 0 0 chr20 8416945 8416966 -63736916 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 490 248 28 0 chr20 8417108 8417217 -63736665 - MIR SINE MIR -71 191 80 2315 215 13 13 chr20 8418052 8418586 -63735296 + MER74A LTR ERVL 1 534 -24 2474 126 48 10 chr20 8418651 8419063 -63734819 - MSTA LTR MaLR 0 428 1 1552 127 43 49 chr20 8419071 8419694 -63734188 + L1MCa LINE L1 1328 2043 -4383 2110 142 31 36 chr20 8419695 8419764 -63734118 - Tigger2 DNA MER2_type 0 2718 2650 2271 112 0 0 chr20 8419764 8420060 -63733822 - AluSx SINE Alu -16 296 1 2110 142 31 36 chr20 8420060 8420377 -63733505 - Tigger2 DNA MER2_type -68 2650 2334 2432 125 6 54 chr20 8420414 8420630 -63733252 + L1MCa LINE L1 2041 2266 -4160 2196 117 7 3 chr20 8420630 8420938 -63732944 + AluSg SINE Alu 1 309 -1 2432 125 6 54 chr20 8420938 8421276 -63732606 + L1MCa LINE L1 2266 2578 -3848 273 75 0 0 chr20 8421319 8421359 -63732523 + (TG)n Simple_repeat Simple_repeat 2 41 0 1054 172 25 0 chr20 8421783 8421981 -63731901 - MER3 DNA MER1_type 0 209 7 888 260 114 6 chr20 8422033 8422383 -63731499 - LTR33A LTR ERVL -75 448 61 928 216 22 0 chr20 8422654 8422835 -63731047 + MER5A DNA MER1_type 1 185 -4 839 142 0 0 chr20 8423324 8423444 -63730438 + FLAM_C SINE Alu 1 120 -13 5301 57 6 6 chr20 8423461 8424141 -63729741 + L1PA7 LINE L1 5475 6154 0 821 214 0 18 chr20 8424141 8424309 -63729573 + FRAM SINE Alu 1 162 -14 603 272 61 10 chr20 8424541 8424755 -63729127 + MIR SINE MIR 40 260 -2 25 0 0 0 chr20 8425867 8425892 -63727990 + AT_rich Low_complexity Low_complexity 1 25 0 4507 138 33 14 chr20 8426565 8427392 -63726490 + L1MA8 LINE L1 5278 6119 -172 682 99 57 7 chr20 8427392 8427533 -63726349 + GA-rich Low_complexity Low_complexity 4 151 0 292 391 75 11 chr20 8427666 8427932 -63725950 - L2 LINE L2 -562 2752 2470 798 274 134 8 chr20 8427960 8428332 -63725550 - LTR16C LTR ERVL 0 491 73 1904 151 17 3 chr20 8428479 8428770 -63725112 + AluJb SINE Alu 3 297 -15 1100 167 28 32 chr20 8430838 8431054 -63722828 - MER20 DNA MER1_type 0 219 5 1884 156 0 11 chr20 8432027 8432309 -63721573 - AluJo SINE Alu -22 290 12 414 246 22 43 chr20 8432669 8432807 -63721075 - MIR SINE MIR -1 261 127 285 332 134 51 chr20 8433060 8433352 -63720530 - L2 LINE L2 -24 3248 2933 353 326 0 0 chr20 8433414 8433506 -63720376 - L2 LINE L2 -37 3276 3185 242 259 102 37 chr20 8433522 8433630 -63720252 + MLT1G1 LTR MaLR 16 130 -465 1348 231 175 19 chr20 8433830 8434316 -63719566 - MLT1G1 LTR MaLR -12 583 22 267 162 73 29 chr20 8434368 8434436 -63719446 + MLT1H LTR MaLR 454 524 -25 1281 160 5 0 chr20 8434718 8434924 -63718958 + AluJo SINE Alu 68 274 -38 1120 98 0 22 chr20 8434927 8435111 -63718771 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 413 195 49 0 chr20 8435123 8435246 -63718636 + GA-rich Low_complexity Low_complexity 4 132 0 201 200 0 40 chr20 8435814 8435864 -63718018 + CT-rich Low_complexity Low_complexity 4 51 0 642 276 24 84 chr20 8436078 8436457 -63717425 - MLT1G3 LTR MaLR -230 323 10 1749 166 10 22 chr20 8437083 8437397 -63716485 + AluSx SINE Alu 3 312 0 842 239 0 16 chr20 8437677 8437861 -63716021 - MER5A DNA MER1_type -8 181 1 197 255 39 20 chr20 8437888 8437939 -63715943 + L2 LINE L2 3008 3059 -254 866 209 6 0 chr20 8438198 8438375 -63715507 - MER5B DNA MER1_type 0 178 1 1080 128 0 16 chr20 8439146 8439334 -63714548 - MER53 DNA DNA -1 188 4 465 335 110 39 chr20 8441643 8442189 -63711693 + L1MC3 LINE L1 924 1508 -4864 1710 201 3 19 chr20 8442250 8442564 -63711318 + AluJb SINE Alu 3 311 -1 369 334 135 32 chr20 8442581 8442922 -63710960 + HAL1b LINE L1 327 1765 -646 203 0 0 36 chr20 8442946 8442974 -63710908 + (TAA)n Simple_repeat Simple_repeat 2 28 0 2112 105 0 46 chr20 8443053 8443377 -63710505 + AluY SINE Alu 1 309 -2 1657 128 0 11 chr20 8443509 8443775 -63710107 - L1PB1 LINE L1 0 6151 5889 3377 78 14 0 chr20 8443779 8444279 -63709603 - L1PB1 LINE L1 -360 5791 5285 450 268 95 30 chr20 8444284 8444567 -63709315 + L1MC3 LINE L1 2169 2467 -3917 584 270 152 46 chr20 8444632 8445257 -63708625 + HAL1 LINE L1 1 691 -1816 1072 21 28 0 chr20 8445332 8445474 -63708408 - L1PA4 LINE L1 -788 5358 5213 6830 21 1 0 chr20 8445477 8446268 -63707614 + L1PA4 LINE L1 5361 6152 -3 290 270 139 48 chr20 8446316 8446819 -63707063 + L1MC3 LINE L1 4307 4855 -1527 1033 269 44 16 chr20 8446849 8447277 -63706605 + L1MC3 LINE L1 5943 6382 -1639 225 83 0 0 chr20 8447828 8447864 -63706018 + (TG)n Simple_repeat Simple_repeat 2 37 0 2316 175 102 0 chr20 8447866 8448318 -63705564 - MER54B LTR ERVL -295 498 1 414 135 0 0 chr20 8448374 8448392 -63705490 + (TC)n Simple_repeat Simple_repeat 2 19 -56 387 0 0 0 chr20 8448392 8448435 -63705447 + (CA)n Simple_repeat Simple_repeat 1 43 0 414 135 0 0 chr20 8448435 8448490 -63705392 + (TC)n Simple_repeat Simple_repeat 18 75 0 884 58 15 2 chr20 8449136 8449270 -63704612 - L1HS LINE L1 0 6154 5990 769 325 133 25 chr20 8449270 8449464 -63704418 + L2 LINE L2 885 1057 -2257 1544 206 62 37 chr20 8449464 8449896 -63703986 + LTR47B LTR ERVL 1 443 0 769 325 133 25 chr20 8449896 8449994 -63703888 + L2 LINE L2 1057 1143 -2171 2371 93 0 10 chr20 8449994 8450304 -63703578 - AluSx SINE Alu -5 307 1 769 325 133 25 chr20 8450304 8450499 -63703383 + L2 LINE L2 1143 1426 -1888 358 258 114 3 chr20 8450529 8450762 -63703120 + L1MEc LINE L1 1536 1910 -4653 303 329 29 22 chr20 8451242 8451379 -63702503 + L1MEc LINE L1 2447 2584 -3798 4970 150 23 8 chr20 8451412 8452419 -63701463 - L1PA16 LINE L1 -16 6150 5128 206 224 20 0 chr20 8454620 8454669 -63699213 + C-rich Low_complexity Low_complexity 4 53 0 220 165 0 51 chr20 8454690 8454769 -63699113 + CT-rich Low_complexity Low_complexity 3 77 0 258 56 0 0 chr20 8454769 8454805 -63699077 + (CCA)n Simple_repeat Simple_repeat 2 37 0 5703 203 2 3 chr20 8455140 8456409 -63697473 - L1 LINE L1 -1011 5135 3868 357 277 117 49 chr20 8456653 8457021 -63696861 + L1MEc LINE L1 2874 3284 -3098 2984 118 12 0 chr20 8457021 8457444 -63696438 + MSTA LTR MaLR 1 428 0 357 277 117 49 chr20 8457444 8457562 -63696320 + L1MEc LINE L1 3284 3393 -2989 550 279 59 69 chr20 8457595 8458464 -63695418 + L1MEc LINE L1 3496 4364 -2018 595 226 25 3 chr20 8458546 8458833 -63695049 + GA-rich Low_complexity Low_complexity 1 293 0 723 184 0 22 chr20 8458873 8459052 -63694830 + GA-rich Low_complexity Low_complexity 2 176 0 275 200 0 0 chr20 8459107 8459167 -63694715 - MLT1D LTR MaLR -8 559 500 704 342 39 24 chr20 8459171 8459583 -63694299 + L1M3c LINE L1 643 1060 -5719 1854 242 48 47 chr20 8460282 8461438 -63692444 + L1M3c LINE L1 1574 2677 -4172 1542 75 0 0 chr20 8461523 8461710 -63692172 + AluY SINE Alu 1 187 -124 358 234 52 0 chr20 8462342 8462419 -63691463 + L2 LINE L2 3187 3267 -5 199 311 87 29 chr20 8463314 8463417 -63690465 - MIR SINE MIR -108 154 46 545 308 68 51 chr20 8464163 8464745 -63689137 + L1ME2 LINE L1 5284 5884 -280 24 0 0 0 chr20 8464923 8464947 -63688935 + AT_rich Low_complexity Low_complexity 1 24 0 27 0 0 0 chr20 8465110 8465137 -63688745 + AT_rich Low_complexity Low_complexity 1 27 0 273 356 54 27 chr20 8465739 8465888 -63687994 - MIR3 SINE MIR -14 194 42 201 298 0 0 chr20 8466203 8466250 -63687632 + polypyrimidine Low_complexity Low_complexity 6 52 0 658 122 320 0 chr20 8466351 8466498 -63687384 - MER3 DNA MER1_type -7 202 9 1361 249 71 48 chr20 8467736 8468214 -63685668 + LTR33 LTR ERVL 19 507 -14 207 283 123 9 chr20 8468592 8468698 -63685184 + L2 LINE L2 2828 2945 -369 512 253 71 0 chr20 8468934 8469104 -63684778 + LTR33A LTR ERVL 288 469 -54 239 217 29 0 chr20 8469445 8469514 -63684368 + (TA)n Simple_repeat Simple_repeat 1 71 0 1183 186 35 64 chr20 8469521 8469833 -63684049 - MLT1D LTR MaLR -78 427 125 2179 208 28 16 chr20 8469833 8470377 -63683505 - MLT1D-int LTR MaLR -821 550 1 2294 181 14 45 chr20 8470378 8470892 -63682990 - MLT1D LTR MaLR -1 504 7 924 269 61 17 chr20 8470895 8471192 -63682690 + LTR16C LTR ERVL 181 490 -1 698 182 0 0 chr20 8471372 8471482 -63682400 + FLAM_A SINE Alu 16 125 -17 1079 187 23 14 chr20 8471585 8471799 -63682083 + MER20 DNA MER1_type 4 219 0 294 274 12 54 chr20 8472295 8472463 -63681419 + CT-rich Low_complexity Low_complexity 3 163 0 4963 127 17 6 chr20 8473030 8473680 -63680202 - L1MA5 LINE L1 0 6300 5638 1071 188 30 0 chr20 8473680 8473882 -63680000 - MER6B DNA MER2_type 0 210 3 4963 127 17 6 chr20 8473882 8474059 -63679823 - L1MA5 LINE L1 -662 5638 5464 188 273 0 0 chr20 8474254 8474298 -63679584 - L2 LINE L2 -10 3262 3219 229 316 8 23 chr20 8474329 8474462 -63679420 + CT-rich Low_complexity Low_complexity 1 131 0 326 265 59 59 chr20 8474468 8474604 -63679278 - MIR SINE MIR -107 155 20 609 345 3 0 chr20 8475472 8475778 -63678104 + L1M4c LINE L1 1515 1979 -4559 2008 168 59 10 chr20 8475826 8476230 -63677652 - MSTB LTR MaLR 0 426 3 21 36 0 0 chr20 8476230 8476258 -63677624 + AT_rich Low_complexity Low_complexity 1 28 0 786 230 62 22 chr20 8476258 8476577 -63677305 - L1ME LINE L1 -608 5558 5228 * 1266 244 60 38 chr20 8476574 8476598 -63677284 + L1ME1 LINE L1 5648 5670 -496 2232 114 3 0 chr20 8476598 8476895 -63676987 + AluSx SINE Alu 1 298 -14 1266 244 60 38 chr20 8476895 8477367 -63676515 + L1ME1 LINE L1 5670 6155 -11 2024 142 0 3 chr20 8477369 8477665 -63676217 - AluSx SINE Alu -17 295 1 620 261 40 0 chr20 8477840 8478089 -63675793 + L1ME3A LINE L1 4459 4717 -1429 2512 255 87 10 chr20 8478138 8479216 -63674666 + L1ME3A LINE L1 4996 6159 -11 339 25 0 0 chr20 8480178 8480218 -63673664 + (TG)n Simple_repeat Simple_repeat 2 41 0 219 366 59 0 chr20 8480279 8480380 -63673502 - MIR SINE MIR -72 136 30 452 346 53 5 chr20 8481037 8481245 -63672637 + MIR SINE MIR 40 257 -5 293 290 70 10 chr20 8483126 8483226 -63670656 - L2 LINE L2 -1 3271 3166 529 307 45 31 chr20 8483560 8483850 -63670032 - LTR16C LTR ERVL -10 481 188 430 356 75 62 chr20 8484303 8484542 -63669340 + L2 LINE L2 2866 3113 -159 1629 178 58 3 chr20 8484542 8484834 -63669048 - AluJo SINE Alu -4 308 1 430 356 75 62 chr20 8484834 8484996 -63668886 + L2 LINE L2 3113 3272 0 274 280 142 66 chr20 8486412 8487495 -63666387 + HAL1 LINE L1 49 1214 -1293 313 180 49 0 chr20 8487567 8487628 -63666254 + MER5A DNA MER1_type 49 112 -77 325 277 20 0 chr20 8487635 8487736 -63666146 + HAL1 LINE L1 1648 1750 -757 498 277 75 28 chr20 8487781 8488142 -63665740 + HAL1 LINE L1 2016 2393 -114 495 320 39 6 chr20 8488718 8488896 -63664986 + MIR SINE MIR 24 207 -55 2127 100 27 10 chr20 8490083 8490384 -63663498 + AluSx SINE Alu 1 306 -6 382 255 0 0 chr20 8490394 8490496 -63663386 + L1ME3 LINE L1 5894 5995 -167 2940 107 49 0 chr20 8491017 8491449 -63662433 + MLT2A2 LTR ERVL 1 453 0 294 29 0 0 chr20 8491634 8491669 -63662213 + (TAGG)n Simple_repeat Simple_repeat 1 35 0 875 233 101 9 chr20 8491840 8492068 -63661814 - MLT1G LTR MaLR -310 280 32 258 250 50 0 chr20 8492484 8492564 -63661318 + MIR SINE MIR 124 207 -55 2367 65 10 0 chr20 8493515 8493807 -63660075 - AluY SINE Alu -16 295 1 1888 270 54 22 chr20 8494073 8494702 -63659180 - MLT2F LTR ERVL -14 649 1 415 184 145 95 chr20 8496169 8496348 -63657534 + MER5A DNA MER1_type 1 188 -1 2163 161 108 33 chr20 8497027 8497319 -63656563 + LTR49 LTR ERV1 1 270 -325 2784 93 3 11 chr20 8497319 8497697 -63656185 - THE1C LTR MaLR 0 375 1 2163 161 108 33 chr20 8497697 8497892 -63655990 + LTR49 LTR ERV1 270 536 -59 2015 122 31 0 chr20 8497892 8498180 -63655702 - AluSx SINE Alu -15 297 1 2163 161 108 33 chr20 8498180 8498237 -63655645 + LTR49 LTR ERV1 536 587 -8 457 276 106 35 chr20 8498691 8498789 -63655093 + MIR SINE MIR 70 160 -102 4061 122 19 0 chr20 8498789 8499411 -63654471 - MER41B LTR ERV1 -1 634 1 457 276 106 35 chr20 8499411 8499482 -63654400 + MIR SINE MIR 160 251 -11 184 286 0 52 chr20 8501793 8501870 -63652012 + L2 LINE L2 3241 3313 0 485 248 18 0 chr20 8502476 8502589 -63651293 + MIR SINE MIR 31 145 -117 193 229 62 0 chr20 8503005 8503053 -63650829 - L2 LINE L2 -7 3306 3256 182 179 77 0 chr20 8503019 8503058 -63650824 - MIR SINE MIR -18 244 203 * 274 246 0 0 chr20 8503343 8503400 -63650482 + L2 LINE L2 3207 3263 -9 548 296 65 26 chr20 8503634 8503942 -63649940 - LTR16C LTR ERVL -3 488 169 360 172 107 25 chr20 8504308 8504430 -63649452 - Charlie1 DNA MER1_type -160 2601 2470 4775 155 38 8 chr20 8504437 8505413 -63648469 - L1PA16 LINE L1 0 6166 5171 526 252 161 56 chr20 8505655 8505996 -63647886 - MLT1J1 LTR MaLR 0 446 70 2549 58 3 0 chr20 8506457 8506783 -63647099 + L1PA5 LINE L1 5815 6141 -13 210 118 0 0 chr20 8506814 8506848 -63647034 + (A)n Simple_repeat Simple_repeat 1 34 0 503 216 0 72 chr20 8507139 8507278 -63646604 - MLT1H LTR MaLR -198 351 223 352 250 144 101 chr20 8507279 8507723 -63646159 + L1MC4a LINE L1 4601 5063 -1083 1531 209 49 49 chr20 8508064 8508560 -63645322 - L1MA9 LINE L1 -38 6274 5776 2545 181 7 0 chr20 8508560 8509024 -63644858 - L1PA16 LINE L1 -6 6160 5694 327 299 45 38 chr20 8509411 8509568 -63644314 - L1 LINE L1 -2714 3432 3275 380 189 0 0 chr20 8509573 8509647 -63644235 - L1PA15 LINE L1 -5 6160 6087 438 133 0 0 chr20 8509649 8509724 -63644158 - L1M2 LINE L1 -528 5784 5710 801 175 48 12 chr20 8509728 8509894 -63643988 - MER58A DNA MER1_type -11 213 42 819 297 68 12 chr20 8509920 8510368 -63643514 + L1MC4a LINE L1 5513 5982 -139 2274 102 3 0 chr20 8510524 8510819 -63643063 + AluSg SINE Alu 1 296 -14 672 194 71 0 chr20 8511661 8511816 -63642066 - LTR16A1 LTR ERVL -50 407 242 265 282 24 12 chr20 8511900 8511985 -63641897 - LTR16A1 LTR ERVL -371 86 1 1718 192 126 21 chr20 8512167 8512401 -63641481 - MLT1C LTR MaLR -1 466 258 387 60 0 0 chr20 8512401 8512451 -63641431 + (TG)n Simple_repeat Simple_repeat 2 51 0 1718 192 126 21 chr20 8512451 8512638 -63641244 - MLT1C LTR MaLR -209 258 1 655 269 196 16 chr20 8513900 8514272 -63639610 + MLT1H LTR MaLR 1 439 -110 572 248 8 0 chr20 8514383 8514508 -63639374 + L2 LINE L2 3187 3312 -1 536 341 24 0 chr20 8514541 8514752 -63639130 - MIR SINE MIR 0 262 47 971 205 45 68 chr20 8515231 8515275 -63638607 - MLT2D LTR ERVL 0 414 370 333 68 0 0 chr20 8515275 8515319 -63638563 + (TG)n Simple_repeat Simple_repeat 2 45 0 971 205 45 68 chr20 8515319 8515611 -63638271 - MLT2D LTR ERVL -44 370 86 1724 196 5 7 chr20 8515979 8516393 -63637489 - L1 LINE L1 -2777 3369 2957 * 7873 138 22 18 chr20 8516390 8518961 -63634921 + L1MA3 LINE L1 3725 6305 0 709 279 45 11 chr20 8519009 8519399 -63634483 + L1ME LINE L1 5226 5626 -538 530 218 98 36 chr20 8519551 8519744 -63634138 - MLT1J2 LTR MaLR -244 206 2 311 230 65 101 chr20 8519745 8519884 -63633998 + L1ME LINE L1 5622 5755 -409 1073 360 108 2 chr20 8519885 8520516 -63633366 - L2 LINE L2 -1665 1649 952 332 209 23 12 chr20 8520746 8520832 -63633050 + LTR16C LTR ERVL 403 489 -2 1867 254 138 40 chr20 8521340 8522135 -63631747 - L2 LINE L2 -1025 2289 1417 497 210 18 27 chr20 8522372 8522540 -63631342 + L1ME LINE L1 4876 5046 -1100 2382 94 0 3 chr20 8522606 8522915 -63630967 + AluY SINE Alu 1 308 -3 286 244 96 0 chr20 8522972 8523107 -63630775 + L1ME LINE L1 5039 5186 -960 4266 109 14 5 chr20 8523108 8523742 -63630140 + L1PA14 LINE L1 5505 6144 -17 26 0 0 0 chr20 8523744 8523770 -63630112 + AT_rich Low_complexity Low_complexity 1 26 0 1026 207 28 26 chr20 8523770 8524130 -63629752 + L1ME LINE L1 5175 5535 -627 777 239 104 63 chr20 8524134 8524549 -63629333 - MER50 LTR ERV1 -293 441 10 407 273 47 40 chr20 8524698 8524782 -63629100 + MIR SINE MIR 50 137 -125 1724 160 31 82 chr20 8524782 8525207 -63628675 - MER57A LTR ERV1 0 403 1 407 273 47 40 chr20 8525207 8525272 -63628610 + MIR SINE MIR 137 200 -62 1645 163 123 30 chr20 8526818 8527216 -63626666 - MER63B DNA MER1_type 0 436 2 1006 259 73 34 chr20 8527560 8527970 -63625912 - LTR16A LTR ERVL 0 450 25 303 260 27 107 chr20 8529076 8529226 -63624656 - MIR SINE MIR -34 228 91 416 301 196 0 chr20 8529920 8530093 -63623789 - MIR SINE MIR 0 262 56 2100 193 0 48 chr20 8530581 8530810 -63623072 - MER63B DNA MER1_type -629 433 235 1630 202 7 10 chr20 8530810 8531102 -63622780 - AluJb SINE Alu -16 296 6 2100 193 0 48 chr20 8531102 8531327 -63622555 - MER63B DNA MER1_type -827 235 1 2307 231 12 12 chr20 8531424 8531938 -63621944 - MLT1F LTR MaLR -5 537 24 738 272 75 8 chr20 8531990 8532258 -63621624 - MLT1B LTR MaLR -40 350 65 2528 65 3 0 chr20 8532515 8532825 -63621057 + AluY SINE Alu 1 311 0 328 313 92 12 chr20 8532882 8533045 -63620837 + MIR SINE MIR 71 246 -16 196 319 97 49 chr20 8533616 8533760 -63620122 - MIR3 SINE MIR -5 203 53 1579 239 66 8 chr20 8533864 8534041 -63619841 - MER90 LTR ERV1 0 614 449 2599 46 0 0 chr20 8534041 8534344 -63619538 + AluY SINE Alu 1 303 -8 1579 239 66 8 chr20 8534344 8534658 -63619224 - MER90 LTR ERV1 -165 449 1 208 225 0 0 chr20 8534670 8534710 -63619172 + GA-rich Low_complexity Low_complexity 3 42 0 201 384 14 0 chr20 8534750 8534847 -63619035 - MIR SINE MIR -64 144 56 2317 86 7 3 chr20 8536937 8537238 -63616644 - AluSc SINE Alu -7 302 1 2675 115 44 0 chr20 8538727 8539137 -63614745 + MSTA LTR MaLR 1 428 0 14587 131 16 13 chr20 8539321 8541730 -63612152 + Tigger1 DNA MER2_type 1 2417 -1 1725 168 25 7 chr20 8544571 8544856 -63609026 + AluJo SINE Alu 1 290 -22 30 27 0 0 chr20 8544858 8544895 -63608987 + AT_rich Low_complexity Low_complexity 1 37 0 4909 227 27 54 chr20 8545113 8546526 -63607356 + MER45R DNA AcHobo 1 1375 -206 1333 233 78 8 chr20 8546526 8546887 -63606995 - MLT1C LTR MaLR 0 467 82 2933 39 0 0 chr20 8546887 8547242 -63606640 + L1PA4 LINE L1 5798 6152 -3 541 168 8 17 chr20 8547340 8547459 -63606423 + MER45R DNA AcHobo 1365 1482 -99 737 199 0 7 chr20 8547463 8547614 -63606268 + L1MB3 LINE L1 6032 6181 -2 654 188 16 8 chr20 8547797 8547925 -63605957 + MER45R DNA AcHobo 1452 1580 -1 2263 103 7 0 chr20 8547981 8548282 -63605600 + AluSp SINE Alu 1 303 -10 315 155 0 155 chr20 8549053 8549156 -63604726 - L1ME3 LINE L1 -127 6035 5949 322 270 40 48 chr20 8549205 8549331 -63604551 + L1MEd LINE L1 1024 1148 -4971 415 292 115 49 chr20 8549348 8549739 -63604143 + HAL1 LINE L1 1329 1745 -762 15319 191 30 18 chr20 8550347 8556681 -63597201 + L1PB1 LINE L1 6 6507 -360 518 162 0 36 chr20 8556681 8556881 -63597001 + (TA)n Simple_repeat Simple_repeat 1 192 0 253 232 0 0 chr20 8556900 8556956 -63596926 + L1 LINE L1 3952 4007 -2139 246 108 0 0 chr20 8556955 8556992 -63596890 - L1P4 LINE L1 -356 5818 5782 * 574 88 0 85 chr20 8556993 8557302 -63596580 + (TA)n Simple_repeat Simple_repeat 1 282 0 2316 133 3 5 chr20 8557323 8557692 -63596190 + L1PB1 LINE L1 6499 6866 -1 210 218 0 58 chr20 8557722 8557809 -63596073 + A-rich Low_complexity Low_complexity 2 83 0 5536 157 38 11 chr20 8558019 8559607 -63594275 - L1PA16 LINE L1 -9 6157 4536 419 276 24 8 chr20 8559850 8559977 -63593905 - L1MC4a LINE L1 -1939 5869 5741 235 191 21 0 chr20 8560012 8560059 -63593823 - MER53 DNA DNA -3 186 139 508 162 38 0 chr20 8560121 8560226 -63593656 - L1MC4a LINE L1 -408 5756 5648 658 223 8 0 chr20 8560349 8560470 -63593412 - FLAM_C SINE Alu -21 122 1 1772 245 48 5 chr20 8560560 8560980 -63592902 - MER82 DNA MER2_type -4 649 212 396 125 0 0 chr20 8560983 8561047 -63592835 + (CATATA)n Simple_repeat Simple_repeat 3 66 0 1002 175 0 11 chr20 8561048 8561231 -63592651 - MER82 DNA MER2_type -450 203 23 2286 68 17 7 chr20 8562158 8562451 -63591431 + AluY SINE Alu 1 296 -15 42587 34 22 1 chr20 8562556 8568579 -63585303 + L1PA2 LINE L1 3 6155 0 1467 168 21 32 chr20 8569283 8569563 -63584319 + Tigger3(Golem) DNA MER2_type 1 277 -2752 614 176 162 0 chr20 8569563 8569705 -63584177 + MER7A DNA MER2_type 2 164 -182 13407 173 23 5 chr20 8569749 8573328 -63580554 - L1PA15-16 LINE L1 -3630 3219 12 1870 297 116 8 chr20 8573347 8574206 -63579676 + L2 LINE L2 2224 3175 -138 410 197 0 0 chr20 8574431 8574497 -63579385 + AluJ/FLAM SINE Alu 3 68 -244 635 221 0 8 chr20 8574505 8574627 -63579255 - FLAM_C SINE Alu -10 123 3 34 72 0 0 chr20 8574635 8574704 -63579178 + AT_rich Low_complexity Low_complexity 1 69 0 633 313 58 3 chr20 8574999 8575325 -63578557 + L1ME4a LINE L1 5522 5865 -256 2417 84 0 3 chr20 8575326 8575634 -63578248 + AluSc SINE Alu 1 307 -2 22 35 0 0 chr20 8575845 8575874 -63578008 + AT_rich Low_complexity Low_complexity 1 29 0 15108 186 39 8 chr20 8576169 8577184 -63576698 + L1M2 LINE L1 7 989 -5859 399 41 0 0 chr20 8577184 8577233 -63576649 + (CA)n Simple_repeat Simple_repeat 1 49 0 15108 186 39 8 chr20 8577233 8579185 -63574697 + L1M2 LINE L1 989 3064 -3784 374 349 86 14 chr20 8579192 8579401 -63574481 - MIR SINE MIR -37 225 2 545 331 78 9 chr20 8579640 8580039 -63573843 - MLT1K LTR MaLR 0 588 115 4080 156 42 11 chr20 8580451 8581253 -63572629 + L1MA8 LINE L1 5464 6290 -1 3308 160 20 24 chr20 8581264 8581900 -63571982 + L1MA9 LINE L1 5591 6224 -88 227 91 23 0 chr20 8581902 8581946 -63571936 - L1M2 LINE L1 -4495 2354 2310 387 217 0 0 chr20 8582015 8582107 -63571775 + L1MA9 LINE L1 6216 6307 -5 284 291 45 18 chr20 8582114 8582224 -63571658 - MIR SINE MIR -148 114 2 187 382 45 27 chr20 8582909 8583129 -63570753 + L3 LINE CR1 939 1162 -415 438 313 27 27 chr20 8585579 8585726 -63568156 - MIR SINE MIR -80 182 36 503 185 0 0 chr20 8585868 8585949 -63567933 - Tigger5 DNA MER2_type -9 2314 2234 343 196 0 0 chr20 8585954 8586010 -63567872 - Tigger5 DNA MER2_type -2267 56 1 243 381 79 14 chr20 8586106 8586245 -63567637 - MIR3 SINE MIR -21 187 40 191 293 121 0 chr20 8586285 8586343 -63567539 - L2 LINE L2 -79 3193 3129 4941 179 27 19 chr20 8588091 8589559 -63564323 - L1MA9 LINE L1 -36 6276 4797 2207 110 0 3 chr20 8589559 8589851 -63564031 - AluSq SINE Alu -22 291 1 4941 179 27 19 chr20 8589851 8589924 -63563958 - L1MA9 LINE L1 -1515 4797 4726 928 127 15 0 chr20 8589926 8590060 -63563822 + AluJb SINE Alu 1 136 -176 5987 205 99 29 chr20 8590072 8590216 -63563666 + L1M2 LINE L1 3464 3597 -3251 1580 124 57 84 chr20 8590216 8590515 -63563367 + AluSg1 SINE Alu 1 291 -18 2203 105 0 7 chr20 8590515 8590810 -63563072 + AluSg SINE Alu 1 293 -17 5987 205 99 29 chr20 8590810 8592500 -63561382 + L1M2 LINE L1 3596 5426 -1422 267 267 17 8 chr20 8593600 8593720 -63560162 - L1MC4 LINE L1 0 8042 7922 1922 245 33 28 chr20 8593834 8594475 -63559407 - L1MC4 LINE L1 -195 7847 7204 294 109 0 0 chr20 8594505 8594551 -63559331 + L1MC4 LINE L1 7093 7138 -904 778 251 48 44 chr20 8594757 8595008 -63558874 - MIR SINE MIR -9 253 2 1177 133 0 0 chr20 8596293 8596459 -63557423 - AluSc SINE Alu -9 300 135 264 247 71 0 chr20 8596567 8596652 -63557230 + MLT1I LTR MaLR 319 409 0 852 133 58 111 chr20 8596720 8596945 -63556937 + MER20 DNA MER1_type 5 217 -2 320 331 68 40 chr20 8597252 8597400 -63556482 - MIR3 SINE MIR -41 167 16 289 298 174 0 chr20 8597756 8597877 -63556005 + MIR3 SINE MIR 22 163 -45 291 240 272 8 chr20 8597906 8598031 -63555851 - MIR SINE MIR 0 262 105 24 0 0 0 chr20 8599178 8599202 -63554680 + AT_rich Low_complexity Low_complexity 1 24 0 2418 56 10 3 chr20 8600628 8600930 -63552952 - AluY SINE Alu -7 304 1 321 351 30 8 chr20 8600944 8601075 -63552807 + MIR3 SINE MIR 32 165 -43 1190 244 19 22 chr20 8601551 8601870 -63552012 - MLT1I LTR MaLR -8 401 84 1046 209 113 30 chr20 8602276 8602611 -63551271 + MER34C LTR ERV1 1 363 -222 3208 160 68 19 chr20 8602701 8603333 -63550549 - LTR51 LTR ERV1 -8 663 1 292 223 21 32 chr20 8603406 8603500 -63550382 + MER34 LTR ERV1 448 540 -2 352 233 7 21 chr20 8603703 8603817 -63550065 - L1MC/D LINE L1 -810 5549 5435 25 0 0 0 chr20 8605193 8605218 -63548664 + AT_rich Low_complexity Low_complexity 1 25 0 340 330 9 0 chr20 8606601 8606713 -63547169 + MIR SINE MIR 69 181 -81 383 299 15 15 chr20 8606769 8606903 -63546979 + MLT1H LTR MaLR 29 162 -387 255 224 45 0 chr20 8607069 8607136 -63546746 + MLT1H LTR MaLR 479 548 -1 1961 173 14 66 chr20 8607449 8607872 -63546010 - MER57A LTR ERV1 -1 402 2 1566 206 87 11 chr20 8608806 8609353 -63544529 + L1ME3 LINE L1 5573 6162 0 1661 191 3 25 chr20 8610870 8611185 -63542697 - AluJo SINE Alu -4 308 1 448 313 102 12 chr20 8611351 8611517 -63542365 - MER5A DNA MER1_type -1 188 8 708 218 141 0 chr20 8613941 8614175 -63539707 + LTR50 LTR ERVL 8 274 -521 318 210 22 10 chr20 8614386 8614484 -63539398 + LTR50 LTR ERVL 425 795 0 2133 116 7 13 chr20 8614602 8614903 -63538979 - AluSx SINE Alu -13 299 1 697 197 104 6 chr20 8616167 8616350 -63537532 + LTR16C LTR ERVL 291 491 0 212 184 0 0 chr20 8617507 8617545 -63536337 + A-rich Low_complexity Low_complexity 1 38 0 2408 107 0 0 chr20 8618249 8618558 -63535324 + AluSq SINE Alu 1 309 -4 21 0 0 0 chr20 8619313 8619334 -63534548 + AT_rich Low_complexity Low_complexity 1 21 0 336 216 0 0 chr20 8619970 8620067 -63533815 + (GAATG)n Simple_repeat Simple_repeat 1 97 0 218 405 14 27 chr20 8622835 8622983 -63530899 + L2 LINE L2 3127 3272 0 287 308 26 8 chr20 8623375 8623492 -63530390 - MIR SINE MIR -33 229 111 329 308 8 8 chr20 8623606 8623723 -63530159 - MIR SINE MIR -33 229 113 449 251 64 55 chr20 8623766 8624092 -63529790 + HAL1b LINE L1 755 1083 -265 453 158 351 0 chr20 8624215 8624329 -63529553 + MER47A DNA MER2_type 1 154 -212 2024 112 6 139 chr20 8624329 8624949 -63528933 - MER1A DNA MER1_type 0 529 1 1019 161 55 46 chr20 8624949 8625086 -63528796 + MER47A DNA MER2_type 147 288 -2035 782 212 18 12 chr20 8625086 8625251 -63528631 - FRAM SINE Alu 0 166 1 1019 161 55 46 chr20 8625251 8625331 -63528551 + MER47A DNA MER2_type 288 366 0 2400 106 0 0 chr20 8627516 8627818 -63526064 - AluSq SINE Alu -11 302 1 290 390 102 0 chr20 8627889 8628007 -63525875 + MIR3 SINE MIR 30 159 -49 567 265 0 87 chr20 8630549 8630755 -63523127 + MER5A DNA MER1_type 4 189 0 367 313 28 40 chr20 8630762 8630938 -63522944 - MER5B DNA MER1_type 0 178 5 206 226 69 118 chr20 8631408 8631510 -63522372 - MIR SINE MIR -75 133 37 1830 216 67 38 chr20 8631536 8632058 -63521824 + MER90 LTR ERV1 1 537 -77 474 233 113 36 chr20 8632104 8632379 -63521503 - L1M1 LINE L1 -4294 3271 2976 356 275 46 38 chr20 8632776 8632907 -63520975 + MIR SINE MIR 4 135 -127 704 195 0 47 chr20 8633432 8633601 -63520281 + L1MB8 LINE L1 5852 6012 -166 211 364 73 9 chr20 8634017 8634127 -63519755 + L2 LINE L2 3180 3296 -17 1499 187 48 12 chr20 8634246 8634577 -63519305 + MER2 DNA MER2_type 2 344 0 572 240 169 0 chr20 8634769 8634923 -63518959 - MER5A DNA MER1_type 0 189 10 1725 183 7 3 chr20 8635076 8635385 -63518497 - AluJo SINE Alu 0 310 1 247 211 141 0 chr20 8635401 8635472 -63518410 + Charlie8 DNA MER1_type 88 168 -2249 1347 269 66 17 chr20 8636427 8636895 -63516987 - LTR16C LTR ERVL 0 491 1 612 280 71 31 chr20 8636995 8637220 -63516662 - L2 LINE L2 -259 3054 2821 565 285 206 22 chr20 8637887 8638164 -63515718 + L2 LINE L2 2302 2629 -685 604 310 74 23 chr20 8639332 8639684 -63514198 - L1ME3A LINE L1 -299 5871 5502 253 103 17 35 chr20 8639687 8639745 -63514137 + LTR66 LTR ERVL 381 437 -173 311 179 28 123 chr20 8639746 8639852 -63514030 - L1MC4 LINE L1 -1340 6702 6607 233 210 29 0 chr20 8639857 8639995 -63513887 + (TA)n Simple_repeat Simple_repeat 1 142 0 368 189 26 0 chr20 8640006 8640159 -63513723 + (TA)n Simple_repeat Simple_repeat 2 158 0 274 232 40 0 chr20 8640282 8640381 -63513501 - L1ME3A LINE L1 -802 5360 5258 646 297 88 24 chr20 8640492 8640903 -63512979 + MLT1J1 LTR MaLR 10 446 0 341 272 19 61 chr20 8641097 8641310 -63512572 - L1ME3A LINE L1 -1198 4948 4745 24 67 0 0 chr20 8641361 8641406 -63512476 + AT_rich Low_complexity Low_complexity 1 45 0 547 237 43 27 chr20 8641409 8641606 -63512276 + MER6 DNA MER2_type -65 864 -1 3115 167 28 31 chr20 8641607 8642279 -63511603 - L1MA6 LINE L1 -29 6271 5602 * 5845 129 18 4 chr20 8642277 8643765 -63510117 - L1PB1 LINE L1 0 6151 4644 4962 230 18 2 chr20 8643760 8644945 -63508937 - L1PB1 LINE L1 -2400 3746 2543 * 1471 124 35 86 chr20 8644952 8645300 -63508582 - L1MA6 LINE L1 -691 5609 5280 5438 173 14 8 chr20 8645348 8646419 -63507463 - L1MA6 LINE L1 -841 5305 4229 377 283 87 6 chr20 8646464 8646637 -63507245 - L1ME3A LINE L1 -1603 4543 4357 811 214 58 0 chr20 8646906 8647079 -63506803 - MER5A DNA MER1_type -6 183 1 1031 169 0 0 chr20 8647702 8647874 -63506008 + AluJb SINE Alu 137 308 -4 846 320 147 41 chr20 8650833 8651147 -63502735 + L3 LINE CR1 768 1047 -530 1686 194 0 3 chr20 8651147 8651431 -63502451 + AluJb SINE Alu 2 284 -28 846 320 147 41 chr20 8651431 8651776 -63502106 + L3 LINE CR1 1047 1497 -80 5229 61 7 5 chr20 8652147 8652821 -63501061 + L1PA8 LINE L1 5483 6158 -14 335 248 197 15 chr20 8652992 8653129 -63500753 - MIR SINE MIR -89 173 12 1602 186 73 37 chr20 8653201 8653583 -63500299 + MSTD LTR MaLR 1 396 0 1295 240 109 40 chr20 8654582 8654986 -63498896 + LTR16A1 LTR ERVL 2 433 -24 192 40 0 0 chr20 8656235 8656260 -63497622 + (TTA)n Simple_repeat Simple_repeat 2 26 0 444 279 9 0 chr20 8656353 8656464 -63497418 - MIR SINE MIR -2 260 149 517 274 55 0 chr20 8656483 8656629 -63497253 - MER5A DNA MER1_type -4 185 32 182 302 0 0 chr20 8656698 8656741 -63497141 + L2 LINE L2 3222 3264 -8 220 236 111 14 chr20 8656742 8656814 -63497068 - MIR SINE MIR -121 141 63 189 171 0 0 chr20 8656923 8656958 -63496924 - MER5B DNA MER1_type 0 178 144 572 246 33 0 chr20 8657008 8657130 -63496752 - MER5B DNA MER1_type -42 136 11 2150 121 12 21 chr20 8657151 8657490 -63496392 - MER1B DNA MER1_type 0 337 2 1210 175 5 9 chr20 8657654 8657865 -63496017 + MER6B DNA MER2_type 1 210 0 192 40 0 0 chr20 8658542 8658567 -63495315 + (CA)n Simple_repeat Simple_repeat 2 26 0 38 22 0 0 chr20 8658586 8658631 -63495251 + AT_rich Low_complexity Low_complexity 1 45 0 191 156 44 0 chr20 8659492 8659537 -63494345 + GA-rich Low_complexity Low_complexity 4 50 0 2400 76 0 16 chr20 8660912 8661226 -63492656 + AluY SINE Alu 1 309 -2 2263 157 60 26 chr20 8661613 8662065 -63491817 + MLT1C LTR MaLR 1 467 0 369 290 83 0 chr20 8663356 8663501 -63490381 + MIR3 SINE MIR 24 180 -28 343 307 56 22 chr20 8663730 8663909 -63489973 + L1ME4a LINE L1 5935 6119 -2 1090 219 108 23 chr20 8664070 8664458 -63489424 - L1MB8 LINE L1 0 6178 5758 32 43 0 0 chr20 8664467 8664513 -63489369 + AT_rich Low_complexity Low_complexity 1 46 0 1176 204 89 15 chr20 8664604 8664873 -63489009 + MLT1F LTR MaLR 254 542 0 2998 149 6 23 chr20 8665197 8665721 -63488161 - L1PA16 LINE L1 0 6166 5652 299 270 70 43 chr20 8665903 8666088 -63487794 + L1 LINE L1 4801 4990 -1156 517 252 56 131 chr20 8667184 8668097 -63485785 - L1MB8 LINE L1 -1160 4986 4143 300 271 93 55 chr20 8668106 8668224 -63485658 - L1MEd LINE L1 -3969 2341 2229 601 222 60 0 chr20 8668224 8668341 -63485541 - FLAM_A SINE Alu -8 125 2 300 271 93 55 chr20 8668341 8668458 -63485424 - L1MEd LINE L1 -4081 2229 2097 666 269 34 21 chr20 8668887 8669317 -63484565 - L1MEd LINE L1 -4786 1524 1050 21 36 0 0 chr20 8669679 8669707 -63484175 + AT_rich Low_complexity Low_complexity 1 28 0 1913 261 85 46 chr20 8669720 8670722 -63483160 + L1MEc LINE L1 1308 2348 -4048 206 324 165 11 chr20 8672867 8673043 -63480839 + L2 LINE L2 3111 3313 0 1020 186 46 0 chr20 8673184 8673378 -63480504 - MER3 DNA MER1_type -1 208 6 1609 40 25 0 chr20 8673601 8673800 -63480082 + L1PA4 LINE L1 5950 6153 -2 9085 103 7 15 chr20 8673943 8674560 -63479322 + HSMAR1 DNA Mariner 1 622 -665 2438 85 0 0 chr20 8674560 8674867 -63479015 - AluSx SINE Alu -5 307 1 9085 103 7 15 chr20 8674867 8675545 -63478337 + HSMAR1 DNA Mariner 622 1285 -2 476 223 18 6 chr20 8676258 8676424 -63477458 + GA-rich Low_complexity Low_complexity 2 169 0 211 200 54 23 chr20 8676444 8676574 -63477308 + GA-rich Low_complexity Low_complexity 2 135 0 210 235 20 10 chr20 8676589 8676687 -63477195 + (TA)n Simple_repeat Simple_repeat 1 99 0 21 36 0 0 chr20 8677335 8677363 -63476519 + AT_rich Low_complexity Low_complexity 1 28 0 2090 128 13 0 chr20 8677537 8677841 -63476041 - AluSx SINE Alu -4 308 1 24 0 0 0 chr20 8678163 8678187 -63475695 + AT_rich Low_complexity Low_complexity 1 24 0 2297 106 0 0 chr20 8678194 8678495 -63475387 + AluSq SINE Alu 1 301 -12 619 325 71 27 chr20 8678716 8679347 -63474535 - L1MEd LINE L1 -838 1652 907 240 303 121 0 chr20 8680025 8680124 -63473758 - L2 LINE L2 -4 3309 3199 1905 135 32 29 chr20 8680153 8680464 -63473418 + AluSx SINE Alu 1 312 0 198 283 0 38 chr20 8681603 8681656 -63472226 - L2 LINE L2 -16 3297 3247 25 51 0 0 chr20 8681971 8682010 -63471872 + AT_rich Low_complexity Low_complexity 1 39 0 553 138 7 48 chr20 8682637 8682782 -63471100 + GA-rich Low_complexity Low_complexity 3 141 0 400 373 122 8 chr20 8683637 8683900 -63469982 + L2 LINE L2 2976 3268 -4 392 275 64 52 chr20 8684028 8684261 -63469621 - MLT1L LTR MaLR -203 412 177 273 372 0 31 chr20 8685961 8686090 -63467792 + MER5A DNA MER1_type 15 139 -50 309 223 223 0 chr20 8686312 8686415 -63467467 - Charlie4 DNA MER1_type -18 1943 1818 236 254 110 17 chr20 8686681 8686799 -63467083 + L2 LINE L2 1634 1762 -1552 23 54 0 0 chr20 8687553 8687590 -63466292 + AT_rich Low_complexity Low_complexity 1 37 0 262 222 74 25 chr20 8687649 8687730 -63466152 - L2 LINE L2 0 3272 3188 2550 110 6 14 chr20 8687749 8688114 -63465768 + THE1B LTR MaLR 1 362 -2 2243 102 7 0 chr20 8688913 8689206 -63464676 + AluSq SINE Alu 5 299 -14 324 241 9 89 chr20 8689303 8689415 -63464467 - L2 LINE L2 -8 3264 3162 393 301 16 59 chr20 8689462 8689587 -63464295 - MER5B DNA MER1_type 0 178 62 2318 114 0 0 chr20 8689587 8689894 -63463988 - AluSx SINE Alu -5 307 1 393 301 16 59 chr20 8689894 8689954 -63463928 - MER5B DNA MER1_type -116 62 1 264 246 0 18 chr20 8690940 8690997 -63462885 - MIR3 SINE MIR -2 206 151 263 250 125 29 chr20 8691205 8691309 -63462573 - MIR SINE MIR -65 143 30 470 234 22 87 chr20 8692051 8692235 -63461647 + MIR SINE MIR 68 239 -23 438 313 39 17 chr20 8692436 8692615 -63461267 - MIR3 SINE MIR -6 202 20 527 77 0 13 chr20 8692628 8692706 -63461176 + (GGAA)n Simple_repeat Simple_repeat 2 78 0 1068 114 0 0 chr20 8692710 8692877 -63461005 + (GGGA)n Simple_repeat Simple_repeat 4 170 0 3013 256 96 32 chr20 8693247 8694374 -63459508 + MER69B DNA AcHobo 28 1226 0 352 226 31 54 chr20 8695827 8696007 -63457875 + L1ME1 LINE L1 5790 5976 -194 900 288 140 11 chr20 8697214 8697672 -63456210 + LTR33A LTR ERVL 7 523 0 1134 266 91 23 chr20 8698414 8698853 -63455029 + LTR33A LTR ERVL 55 523 0 37 52 0 0 chr20 8701415 8701473 -63452409 + AT_rich Low_complexity Low_complexity 1 58 0 3135 219 20 58 chr20 8701473 8702628 -63451254 - L1ME1 LINE L1 -24 6142 5032 336 166 108 70 chr20 8702646 8702803 -63451079 - MER63 DNA MER1_type -840 221 59 259 238 48 0 chr20 8702851 8702914 -63450968 - MER63 DNA MER1_type -994 67 2 440 344 36 36 chr20 8702944 8703194 -63450688 + MIR SINE MIR 12 261 -1 717 307 116 16 chr20 8704459 8704837 -63449045 - L3 LINE CR1 -486 1091 676 902 288 148 30 chr20 8704857 8705350 -63448532 + MLT1K LTR MaLR 32 582 -6 377 298 173 13 chr20 8705350 8705575 -63448307 - L3 LINE CR1 -899 678 418 273 373 84 31 chr20 8706041 8706266 -63447616 - L3 LINE CR1 -1278 299 63 1719 190 40 3 chr20 8706429 8706729 -63447153 + AluJb SINE Alu 1 311 -1 1032 254 5 5 chr20 8707952 8708176 -63445706 - MER58A DNA MER1_type 0 224 1 4228 167 80 19 chr20 8708443 8709256 -63444626 + MER21B LTR ERV1 1 863 0 597 234 179 33 chr20 8709545 8709818 -63444064 + MLT1J2 LTR MaLR 138 450 0 524 250 172 64 chr20 8711156 8711592 -63442290 + MLT1H1 LTR MaLR 60 542 -13 285 262 87 19 chr20 8711632 8711735 -63442147 + MIR SINE MIR 105 214 -48 1555 228 38 14 chr20 8712074 8712499 -63441383 + MER63B DNA MER1_type 1 435 -1 232 222 37 25 chr20 8712622 8712703 -63441179 - MIR SINE MIR -97 165 84 517 275 83 36 chr20 8712781 8712974 -63440908 - MIR SINE MIR -39 223 22 565 223 29 7 chr20 8712983 8713122 -63440760 - Charlie8 DNA MER1_type -2181 236 95 329 286 40 31 chr20 8713126 8713353 -63440529 - L1MEd LINE L1 -4916 1203 975 762 246 16 5 chr20 8713395 8713582 -63440300 - MER5A DNA MER1_type 0 189 1 306 293 0 9 chr20 8713779 8713885 -63439997 + (TA)n Simple_repeat Simple_repeat 1 105 0 844 110 14 2 chr20 8714792 8714940 -63438942 + L1P5 LINE L1 5659 5811 -340 256 259 12 0 chr20 8715452 8715533 -63438349 - MLT1I LTR MaLR 0 409 328 499 271 41 106 chr20 8715725 8716065 -63437817 + MLT1H LTR MaLR 228 545 -4 479 149 0 11 chr20 8716066 8716160 -63437722 + (GGAA)n Simple_repeat Simple_repeat 3 95 0 352 90 39 26 chr20 8716169 8716247 -63437635 + A-rich Low_complexity Low_complexity 5 83 0 1702 128 8 4 chr20 8716248 8716505 -63437377 + AluSg SINE Alu 45 302 -8 1726 127 41 4 chr20 8716510 8716777 -63437105 + AluSp SINE Alu 36 312 -1 210 225 0 0 chr20 8716778 8716818 -63437064 + GA-rich Low_complexity Low_complexity 1 40 0 2390 93 3 0 chr20 8716873 8717185 -63436697 - AluSp SINE Alu 0 313 1 23 33 0 0 chr20 8717327 8717357 -63436525 + AT_rich Low_complexity Low_complexity 1 30 0 23 0 0 0 chr20 8717401 8717424 -63436458 + AT_rich Low_complexity Low_complexity 1 23 0 186 189 0 0 chr20 8717715 8717752 -63436130 + (TATG)n Simple_repeat Simple_repeat 2 38 0 5964 134 25 4 chr20 8718248 8719371 -63434511 - L1MA2 LINE L1 0 6304 5162 640 296 40 36 chr20 8719372 8719619 -63434263 - MIR SINE MIR -6 256 9 1221 184 12 34 chr20 8719885 8720211 -63433671 + MER33 DNA MER1_type 6 324 0 540 205 27 7 chr20 8720434 8720736 -63433146 + CT-rich Low_complexity Low_complexity 1 308 0 756 232 62 0 chr20 8720780 8720957 -63432925 + MER63B DNA MER1_type 15 202 -234 1127 212 76 68 chr20 8720957 8721311 -63432571 + MSTD LTR MaLR 1 357 -39 1792 103 0 103 chr20 8721313 8721623 -63432259 + AluSx SINE Alu 1 278 -34 1046 85 23 17 chr20 8721631 8721652 -63432230 + (GAAA)n Simple_repeat Simple_repeat 1 199 0 1046 85 23 17 chr20 8721652 8721829 -63432053 + (GAAA)n Simple_repeat Simple_repeat 1 178 0 275 146 0 0 chr20 8721979 8722027 -63431855 + MSTD LTR MaLR 410 457 0 * 907 169 68 42 chr20 8722027 8722260 -63431622 + MER63B DNA MER1_type 196 434 0 311 0 26 0 chr20 8722306 8722345 -63431537 + (TAAA)n Simple_repeat Simple_repeat 2 41 0 632 313 141 18 chr20 8722402 8722686 -63431196 - L3b LINE CR1 -8 1575 1257 337 300 64 34 chr20 8724066 8724299 -63429583 + Charlie8 DNA MER1_type 2 241 -2176 379 339 40 11 chr20 8725020 8725197 -63428685 - HAL1b LINE L1 -6 1342 1161 858 234 196 44 chr20 8725206 8725792 -63428090 - HAL1b LINE L1 -161 1187 513 180 268 0 0 chr20 8725801 8725872 -63428010 + (TG)n Simple_repeat Simple_repeat 1 71 0 388 293 107 21 chr20 8725872 8726114 -63427768 - HAL1b LINE L1 -841 507 245 534 194 10 19 chr20 8726133 8726236 -63427646 - MIR SINE MIR -133 129 28 198 323 15 0 chr20 8726943 8727008 -63426874 - MIR3 SINE MIR -25 183 118 1184 250 69 37 chr20 8727117 8727553 -63426329 + LTR16A1 LTR ERVL 2 451 -6 367 314 8 0 chr20 8728707 8728825 -63425057 - MLT1I LTR MaLR -3 406 288 883 38 0 0 chr20 8728867 8728972 -63424910 - AluSc SINE Alu -177 132 28 1359 113 0 0 chr20 8728972 8729158 -63424724 + AluSc SINE Alu 124 309 0 238 298 149 0 chr20 8729177 8729271 -63424611 - MLT1I LTR MaLR -192 217 110 260 295 0 0 chr20 8729378 8729439 -63424443 - L2 LINE L2 -1 3312 3252 768 211 165 8 chr20 8729641 8729902 -63423980 - MER33 DNA MER1_type 0 324 23 234 0 0 0 chr20 8729974 8730000 -63423882 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 303 226 24 95 chr20 8732314 8732398 -63421484 - MER5A DNA MER1_type -103 86 9 227 304 51 0 chr20 8733148 8733227 -63420655 + MIR SINE MIR 124 206 -56 338 303 40 10 chr20 8734648 8734747 -63419135 + L2 LINE L2 3212 3313 0 794 173 4 169 chr20 8734770 8734841 -63419041 + MER5A DNA MER1_type 1 82 -107 667 229 15 0 chr20 8734841 8734972 -63418910 + FLAM_A SINE Alu 1 133 0 794 173 4 169 chr20 8734972 8735125 -63418757 + MER5A DNA MER1_type 82 188 -1 410 277 16 54 chr20 8735134 8735318 -63418564 - MER5B DNA MER1_type 0 178 2 577 216 170 7 chr20 8735484 8735637 -63418245 + MER5A DNA MER1_type 10 187 -2 642 304 100 17 chr20 8735964 8736194 -63417688 - MIR SINE MIR -11 251 3 2249 106 50 9 chr20 8737245 8737586 -63416296 - THE1A LTR MaLR 0 355 1 367 362 40 20 chr20 8737817 8737969 -63415913 + MER5A DNA MER1_type 35 189 0 261 363 40 24 chr20 8737982 8738106 -63415776 + MIR SINE MIR 17 142 -66 240 35 0 0 chr20 8738536 8738565 -63415317 + (CTATA)n Simple_repeat Simple_repeat 5 33 0 865 211 47 86 chr20 8738566 8738950 -63414932 - L1MC4 LINE L1 -159 7883 7515 524 305 90 11 chr20 8739386 8739563 -63414319 + MIR3 SINE MIR 7 197 -11 986 201 12 0 chr20 8740312 8740481 -63413401 + AluJb SINE Alu 134 304 -8 531 175 0 28 chr20 8741238 8741381 -63412501 + CT-rich Low_complexity Low_complexity 4 142 0 1022 177 16 0 chr20 8741799 8741991 -63411891 - MLT1D LTR MaLR 0 505 311 771 276 20 5 chr20 8741991 8742190 -63411692 - MIR SINE MIR -50 212 11 189 0 0 0 chr20 8742952 8742973 -63410909 + (TA)n Simple_repeat Simple_repeat 2 22 0 363 78 0 0 chr20 8742973 8743024 -63410858 + (CA)n Simple_repeat Simple_repeat 2 52 0 371 186 137 8 chr20 8744213 8744337 -63409545 + L2 LINE L2 2549 2688 -626 453 36 0 0 chr20 8745103 8745158 -63408724 + (CCTA)n Simple_repeat Simple_repeat 1 55 0 1006 273 104 9 chr20 8745477 8745997 -63407885 + L2 LINE L2 2504 3079 -234 863 301 139 29 chr20 8746406 8746815 -63407067 + MER115 DNA AcHobo 1 454 -239 184 204 41 0 chr20 8747515 8747564 -63406318 + L3 LINE CR1 1513 1563 -14 1583 269 20 3 chr20 8748376 8748718 -63405164 - LTR16C LTR ERVL 0 491 144 180 0 0 0 chr20 8748732 8748752 -63405130 + (TTTA)n Simple_repeat Simple_repeat 4 23 0 23 86 0 0 chr20 8748760 8748818 -63405064 + AT_rich Low_complexity Low_complexity 1 58 0 370 267 62 41 chr20 8749329 8749475 -63404407 - MIR SINE MIR -34 228 80 495 269 90 39 chr20 8749666 8749900 -63403982 - L1ME3A LINE L1 -11 6159 5914 852 222 97 0 chr20 8749908 8750115 -63403767 - L1ME3A LINE L1 -301 5869 5643 324 301 9 0 chr20 8750124 8750237 -63403645 + (TATATG)n Simple_repeat Simple_repeat 6 119 0 842 174 12 76 chr20 8750880 8751052 -63402830 - MER5A DNA MER1_type -21 168 8 370 223 62 111 chr20 8752201 8752457 -63401425 - MIR SINE MIR -6 256 12 190 344 104 21 chr20 8752646 8752742 -63401140 + MIR3 SINE MIR 2 105 -103 316 290 76 124 chr20 8752768 8753123 -63400759 - L2 LINE L2 0 3272 2935 429 403 35 0 chr20 8753168 8753394 -63400488 - L2 LINE L2 -501 2813 2580 297 327 58 10 chr20 8753534 8753638 -63400244 + L2 LINE L2 3164 3272 0 201 318 143 26 chr20 8753654 8753808 -63400074 - L2 LINE L2 -841 2473 2302 260 313 57 68 chr20 8753954 8754146 -63399736 - L2 LINE L2 -4 3309 3120 313 354 89 46 chr20 8754214 8754516 -63399366 - L2 LINE L2 -363 2951 2637 273 119 0 0 chr20 8754628 8754670 -63399212 + (TA)n Simple_repeat Simple_repeat 1 42 0 305 299 107 16 chr20 8754862 8755049 -63398833 - L1M4c LINE L1 -3894 2646 2443 275 254 67 12 chr20 8755421 8755567 -63398315 - L1M4c LINE L1 -869 2032 1674 250 290 58 0 chr20 8755897 8755966 -63397916 - MIR3 SINE MIR -127 81 9 6402 182 32 14 chr20 8756300 8758505 -63395377 - L1PA16 LINE L1 -3 6163 3919 3025 228 30 16 chr20 8758504 8759260 -63394622 + L1PA16 LINE L1 3166 3932 -2214 * 1229 281 94 2 chr20 8759598 8760003 -63393879 + L2 LINE L2 2536 2977 -337 1208 186 60 116 chr20 8760009 8760390 -63393492 + MLT1A1 LTR MaLR 6 365 0 222 311 14 0 chr20 8760390 8760464 -63393418 + L2 LINE L2 2973 3047 -266 278 122 0 0 chr20 8760577 8760618 -63393264 + L2 LINE L2 3268 3308 -5 276 313 188 0 chr20 8760643 8760771 -63393111 - MIR SINE MIR -37 225 74 1347 233 106 45 chr20 8763095 8763520 -63390362 - LTR16A1 LTR ERVL -1 456 6 203 385 0 15 chr20 8763564 8763629 -63390253 - L2 LINE L2 -214 3058 2995 477 0 0 0 chr20 8763660 8763713 -63390169 + (TCTA)n Simple_repeat Simple_repeat 2 54 0 309 276 43 13 chr20 8763878 8764081 -63389801 + MLT1J2 LTR MaLR 85 327 -123 710 326 19 23 chr20 8766357 8766527 -63387355 - LTR16C LTR ERVL -2 489 319 3273 140 42 58 chr20 8766527 8767171 -63386711 + MER51A LTR ERV1 1 634 0 710 326 19 23 chr20 8767171 8767310 -63386572 - LTR16C LTR ERVL -172 319 181 233 222 22 0 chr20 8767580 8767625 -63386257 + MER77 LTR ERV1 199 244 -361 1639 230 23 4 chr20 8767855 8768219 -63385663 - MER77 LTR ERV1 -37 536 196 218 56 28 0 chr20 8768332 8768368 -63385514 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 706 200 72 48 chr20 8768672 8768922 -63384960 - MER33 DNA MER1_type -22 302 47 305 267 86 0 chr20 8769191 8769296 -63384586 - MIR SINE MIR -109 153 40 890 182 47 6 chr20 8770095 8770265 -63383617 - MER5B DNA MER1_type -1 177 1 504 297 29 0 chr20 8770951 8771089 -63382793 - MIR SINE MIR -95 167 26 778 266 101 0 chr20 8771184 8771402 -63382480 - LTR16A LTR ERVL -67 383 144 6194 189 66 9 chr20 8771839 8774463 -63379419 + L1MC1 LINE L1 3550 6326 -7 577 258 6 24 chr20 8775149 8775161 -63378721 - L1MA10 LINE L1 -2 6332 6321 445 269 21 59 chr20 8775161 8775241 -63378641 - L1ME1 LINE L1 -5 6161 6080 1503 183 115 3 chr20 8775241 8775553 -63378329 - MER7A DNA MER2_type -1 345 1 445 269 21 59 chr20 8775553 8775658 -63378224 - L1ME1 LINE L1 -86 6080 5983 1093 240 57 0 chr20 8775673 8775952 -63377930 - L1ME1 LINE L1 -277 5889 5595 24 32 0 0 chr20 8776272 8776303 -63377579 + AT_rich Low_complexity Low_complexity 1 31 0 9705 222 48 36 chr20 8777049 8778424 -63375458 - L1MB8 LINE L1 -18 6229 4871 297 0 0 0 chr20 8778424 8778457 -63375425 + (GA)n Simple_repeat Simple_repeat 2 34 0 9705 222 48 36 chr20 8778457 8780802 -63373080 - L1MB8 LINE L1 -1376 4871 2505 2567 93 8 3 chr20 8780802 8781155 -63372727 - THE1A LTR MaLR 0 355 1 9705 222 48 36 chr20 8781155 8781493 -63372389 - L1MB8 LINE L1 -3742 2505 2172 920 133 0 13 chr20 8781497 8781648 -63372234 - L1MA10 LINE L1 -10 6324 6176 1291 173 27 0 chr20 8781658 8781947 -63371935 - L1MB1 LINE L1 -70 6119 5782 864 232 0 77 chr20 8781947 8782154 -63371728 - MER8 DNA MER2_type 0 239 49 961 181 135 46 chr20 8782160 8782463 -63371419 - L1MB8 LINE L1 -1 6177 5848 * 4052 180 30 82 chr20 8782460 8783583 -63370299 + L1MB3 LINE L1 4871 5905 -278 234 0 0 0 chr20 8783583 8783609 -63370273 + (CA)n Simple_repeat Simple_repeat 1 26 0 4052 180 30 82 chr20 8783609 8783874 -63370008 + L1MB3 LINE L1 5905 6182 -1 1782 183 36 3 chr20 8784242 8784575 -63369307 - MER2 DNA MER2_type 0 344 1 330 227 191 4 chr20 8784827 8785052 -63368830 + HAL1 LINE L1 996 1262 -1245 404 294 128 38 chr20 8785151 8785386 -63368496 - HAL1 LINE L1 -1139 1368 1113 28 29 0 0 chr20 8786439 8786474 -63367408 + AT_rich Low_complexity Low_complexity 1 35 0 642 251 88 100 chr20 8786520 8787022 -63366860 - MLT1J LTR MaLR -3 508 13 376 337 30 24 chr20 8787142 8787355 -63366527 - MIR SINE MIR -13 249 37 2217 120 3 3 chr20 8787530 8787838 -63366044 + AluSx SINE Alu 1 308 -4 22 0 0 0 chr20 8789240 8789262 -63364620 + AT_rich Low_complexity Low_complexity 1 22 0 6341 210 83 19 chr20 8789637 8791050 -63362832 + L1ME LINE L1 18 1520 -5339 349 258 143 48 chr20 8791160 8791369 -63362513 + HAL1b LINE L1 57 285 -1063 25 31 0 0 chr20 8791496 8791528 -63362354 + AT_rich Low_complexity Low_complexity 1 32 0 2463 185 38 20 chr20 8791572 8792496 -63361386 + L1ME LINE L1 5595 6533 -452 204 319 44 11 chr20 8792507 8792598 -63361284 + MIR3 SINE MIR 111 204 -4 197 148 17 43 chr20 8793101 8793216 -63360666 + (TATAA)n Simple_repeat Simple_repeat 5 116 0 1537 148 30 23 chr20 8795056 8795360 -63358522 - L1MB8 LINE L1 -17 6161 5856 529 214 48 8 chr20 8795361 8795487 -63358395 - Charlie8 DNA MER1_type -2214 203 73 14582 137 22 9 chr20 8796348 8798736 -63355146 + Tigger1 DNA MER2_type 1 2418 0 239 331 101 14 chr20 8800328 8800476 -63353406 + MIR3 SINE MIR 44 204 -4 21 0 0 0 chr20 8800655 8800676 -63353206 + AT_rich Low_complexity Low_complexity 1 21 0 312 263 120 87 chr20 8801341 8801790 -63352092 + MLT1J LTR MaLR 6 469 -42 2217 120 73 15 chr20 8802517 8802859 -63351023 - THE1B LTR MaLR -2 362 1 1946 153 0 25 chr20 8803078 8803398 -63350484 - AluJb SINE Alu 0 312 1 6392 68 0 0 chr20 8803443 8804296 -63349586 - L1PA6 LINE L1 0 6154 5302 1854 97 0 0 chr20 8804294 8804583 -63349299 + L1PA6 LINE L1 5014 5302 -844 * 367 324 200 0 chr20 8805269 8805414 -63348468 + MER5A DNA MER1_type 16 189 0 2076 139 3 3 chr20 8806733 8807043 -63346839 + AluSx SINE Alu 1 310 -2 22 0 0 0 chr20 8807071 8807093 -63346789 + AT_rich Low_complexity Low_complexity 1 22 0 653 214 26 0 chr20 8807456 8807610 -63346272 - MER45A DNA AcHobo 0 178 21 460 310 150 9 chr20 8807746 8807959 -63345923 + MIR SINE MIR 20 262 0 249 253 35 0 chr20 8807987 8808074 -63345808 + L1ME LINE L1 6527 6616 -316 546 278 74 0 chr20 8808118 8808294 -63345588 + MER5A DNA MER1_type 1 189 0 339 25 0 0 chr20 8810062 8810102 -63343780 + (CA)n Simple_repeat Simple_repeat 1 40 0 1445 224 78 28 chr20 8810184 8810657 -63343225 - L1MB8 LINE L1 -2 6987 6491 4525 171 21 12 chr20 8810666 8811317 -63342565 + L1MB3 LINE L1 4944 5618 -565 2456 34 0 7 chr20 8811317 8811612 -63342270 + AluY SINE Alu 1 293 -18 4525 171 21 12 chr20 8811612 8812183 -63341699 + L1MB3 LINE L1 5618 6182 -1 2691 237 33 26 chr20 8812310 8812657 -63341225 - L1MB8 LINE L1 -492 6497 6154 1862 89 0 63 chr20 8812657 8812928 -63340954 - AluSq SINE Alu -16 297 44 2691 237 33 26 chr20 8812928 8813683 -63340199 - L1MB8 LINE L1 -835 6154 5372 349 211 10 19 chr20 8813820 8813924 -63339958 + (CATATA)n Simple_repeat Simple_repeat 5 107 0 1782 247 56 79 chr20 8814102 8814944 -63338938 - L1MB8 LINE L1 -4566 2393 1583 2061 119 58 0 chr20 8814944 8815239 -63338643 - AluSx SINE Alu 0 312 1 1782 247 56 79 chr20 8815239 8815625 -63338257 - L1MB8 LINE L1 -5376 1583 1190 373 336 112 20 chr20 8815697 8815992 -63337890 - L1MB8 LINE L1 -5672 1183 862 244 308 17 8 chr20 8816250 8816370 -63337512 - L1MB8 LINE L1 -6647 212 92 231 267 0 0 chr20 8816566 8816611 -63337271 + MIR SINE MIR 33 77 -131 239 337 49 34 chr20 8817053 8817093 -63336789 + MIR SINE MIR 53 91 -171 2377 104 3 0 chr20 8817093 8817402 -63336480 - AluSp SINE Alu -3 310 1 239 337 49 34 chr20 8817402 8817566 -63336316 + MIR SINE MIR 91 260 -2 2198 132 0 0 chr20 8817705 8818015 -63335867 + AluSx SINE Alu 1 310 -2 500 152 10 0 chr20 8818015 8818114 -63335768 + GA-rich Low_complexity Low_complexity 1 100 0 234 247 151 32 chr20 8819118 8819211 -63334671 - MER5A DNA MER1_type -80 109 6 364 321 28 0 chr20 8819249 8819355 -63334527 + L2 LINE L2 3197 3305 -8 2249 171 44 2 chr20 8821512 8821921 -63331961 + MSTB LTR MaLR 1 426 0 2951 208 101 36 chr20 8822437 8823917 -63329965 + L1MD2 LINE L1 16 1897 -4643 2474 218 29 14 chr20 8823952 8824682 -63329200 + L1MD2 LINE L1 4411 5151 -1389 721 182 0 0 chr20 8824723 8824844 -63329038 - FLAM_C SINE Alu -22 121 1 2979 205 107 41 chr20 8824850 8826287 -63327595 + L1MD2 LINE L1 5162 6684 -69 1306 307 126 45 chr20 8826366 8827376 -63326506 + L2 LINE L2 1536 2626 -688 1144 194 227 102 chr20 8827377 8827442 -63326440 - MLT1E1 LTR MaLR 0 654 599 2109 133 0 13 chr20 8827442 8827744 -63326138 - AluSx SINE Alu -14 298 1 1144 194 227 102 chr20 8827744 8828259 -63325623 - MLT1E1 LTR MaLR -55 599 1 262 300 149 49 chr20 8828259 8828650 -63325232 + L2 LINE L2 2623 3062 -210 2079 196 24 15 chr20 8829923 8830378 -63323504 - MER65C LTR ERV1 0 461 3 1845 212 99 38 chr20 8830391 8830925 -63322957 + MLT1F1 LTR MaLR 1 567 0 360 339 22 17 chr20 8830982 8831173 -63322709 - MIR SINE MIR -56 206 17 1507 163 16 6 chr20 8831378 8831691 -63322191 - MER33 DNA MER1_type -3 321 6 2466 51 0 26 chr20 8833289 8833602 -63320280 + AluY SINE Alu 1 305 -6 2398 64 0 20 chr20 8834601 8834898 -63318984 + AluY SINE Alu 1 291 -20 225 254 0 0 chr20 8834940 8835011 -63318871 + (TA)n Simple_repeat Simple_repeat 2 72 0 207 0 0 0 chr20 8836005 8836028 -63317854 + (T)n Simple_repeat Simple_repeat 1 23 0 252 143 0 0 chr20 8836347 8836389 -63317493 + (TG)n Simple_repeat Simple_repeat 2 43 0 192 231 0 0 chr20 8837138 8837190 -63316692 + (CATATA)n Simple_repeat Simple_repeat 3 54 0 496 228 25 122 chr20 8838129 8838326 -63315556 + MER5A DNA MER1_type 4 181 -8 261 0 0 0 chr20 8838534 8838563 -63315319 + (TAAA)n Simple_repeat Simple_repeat 2 30 0 21 57 0 0 chr20 8839436 8839471 -63314411 + AT_rich Low_complexity Low_complexity 1 35 0 198 71 0 0 chr20 8841745 8841773 -63312109 + (TA)n Simple_repeat Simple_repeat 2 29 0 22 35 0 0 chr20 8843516 8843545 -63310337 + AT_rich Low_complexity Low_complexity 1 29 0 383 279 137 12 chr20 8844173 8844334 -63309548 - MER5A DNA MER1_type 0 189 9 240 217 72 14 chr20 8845216 8845285 -63308597 + MER116 DNA Mariner 3 75 -5 519 246 87 0 chr20 8846145 8846271 -63307611 - MIR SINE MIR -54 208 72 1948 161 3 3 chr20 8846322 8846633 -63307249 - AluSx SINE Alu -1 311 1 180 0 0 0 chr20 8846993 8847013 -63306869 + (CAA)n Simple_repeat Simple_repeat 2 21 0 324 0 0 0 chr20 8851228 8851264 -63302618 + (CA)n Simple_repeat Simple_repeat 2 37 0 209 57 29 0 chr20 8851701 8851736 -63302146 + (TAAA)n Simple_repeat Simple_repeat 1 36 0 213 39 0 0 chr20 8853166 8853192 -63300690 + (CGG)n Simple_repeat Simple_repeat 1 26 0 36 53 0 0 chr20 8853330 8853387 -63300495 + GC_rich Low_complexity Low_complexity 1 57 0 189 0 0 0 chr20 8853573 8853594 -63300288 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 399 313 0 17 chr20 8853713 8853892 -63299990 + (TA)n Simple_repeat Simple_repeat 2 177 0 180 0 0 0 chr20 8854874 8854894 -63298988 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 222 37 0 0 chr20 8855263 8855290 -63298592 + (TAAA)n Simple_repeat Simple_repeat 4 30 0 207 300 71 14 chr20 8856463 8856533 -63297349 + MIR SINE MIR 38 111 -97 203 146 24 0 chr20 8856712 8856753 -63297129 + CT-rich Low_complexity Low_complexity 1 42 0 2061 133 59 19 chr20 8856825 8857149 -63296733 - MER1B DNA MER1_type 0 337 1 216 292 45 22 chr20 8857175 8857264 -63296618 + MIR SINE MIR 117 207 -55 241 290 65 38 chr20 8857826 8858012 -63295870 - L2 LINE L2 -3 3310 3120 426 291 64 21 chr20 8858089 8858230 -63295652 - MIR SINE MIR -108 154 8 339 309 114 30 chr20 8858393 8858707 -63295175 - LTR33 LTR ERVL -11 510 119 1983 216 189 6 chr20 8858713 8859242 -63294640 - MLT1E1 LTR MaLR 0 654 29 216 0 0 0 chr20 8859709 8859733 -63294149 + (CAAAAA)n Simple_repeat Simple_repeat 2 25 0 1719 41 0 0 chr20 8860817 8861014 -63292868 - L1PA5 LINE L1 0 6154 5958 348 264 56 32 chr20 8861500 8861625 -63292257 + MER94 DNA DNA 7 134 0 596 290 116 1 chr20 8862991 8863369 -63290513 + LTR16C LTR ERVL 34 483 -8 482 304 30 38 chr20 8863621 8863858 -63290024 - L2 LINE L2 -183 3089 2855 250 192 13 13 chr20 8864970 8865048 -63288834 + GA-rich Low_complexity Low_complexity 3 80 0 1806 135 112 35 chr20 8865433 8865781 -63288101 - THE1C LTR MaLR 0 375 1 28 29 0 0 chr20 8866108 8866143 -63287739 + AT_rich Low_complexity Low_complexity 1 35 0 2273 151 20 25 chr20 8866148 8866636 -63287246 - L1MA9 LINE L1 -22 6290 5702 * 4038 175 46 1 chr20 8866624 8867414 -63286468 + L1 LINE L1 4407 5231 -915 28 79 0 0 chr20 8867700 8867763 -63286119 + AT_rich Low_complexity Low_complexity 1 63 0 1032 142 0 0 chr20 8867764 8867912 -63285970 - FRAM SINE Alu -20 156 9 35 24 0 0 chr20 8868046 8868088 -63285794 + AT_rich Low_complexity Low_complexity 1 42 0 278 245 210 80 chr20 8868241 8868268 -63285614 - L1MC/D LINE L1 -1922 5886 5864 2083 97 4 7 chr20 8868268 8868572 -63285310 + AluSc SINE Alu 1 303 0 278 245 210 80 chr20 8868572 8868927 -63284955 - L1MC/D LINE L1 -1944 5864 5411 2427 69 3 3 chr20 8868927 8869231 -63284651 - AluY SINE Alu -7 304 1 278 245 210 80 chr20 8869231 8869385 -63284497 - L1MC/D LINE L1 -2397 5411 5278 333 349 62 16 chr20 8869423 8869730 -63284152 - L1MC/D LINE L1 -845 5301 4981 935 227 15 0 chr20 8869949 8870147 -63283735 - MER6B DNA MER2_type -7 203 3 278 289 26 0 chr20 8870147 8870223 -63283659 + L2 LINE L2 3236 3313 0 382 292 24 56 chr20 8870249 8870424 -63283458 - HAL1b LINE L1 -437 911 745 1903 140 9 22 chr20 8870424 8870739 -63283143 - AluJb SINE Alu -1 311 1 382 292 24 56 chr20 8870739 8870813 -63283069 - HAL1b LINE L1 -603 745 670 325 296 44 48 chr20 8871078 8871372 -63282510 - HAL1b LINE L1 -878 470 178 21 36 0 0 chr20 8871650 8871678 -63282204 + AT_rich Low_complexity Low_complexity 1 28 0 638 344 57 0 chr20 8871945 8872192 -63281690 - MIR SINE MIR -1 261 1 24 0 0 0 chr20 8872412 8872436 -63281446 + AT_rich Low_complexity Low_complexity 1 24 0 279 0 0 0 chr20 8873004 8873035 -63280847 + (CA)n Simple_repeat Simple_repeat 1 31 0 856 256 79 4 chr20 8873514 8873741 -63280141 + MLT1G LTR MaLR 12 255 -335 754 234 8 98 chr20 8873751 8874016 -63279866 + MIR SINE MIR 1 241 -21 1079 267 181 2 chr20 8874785 8875204 -63278678 + LTR33A LTR ERVL 29 522 -1 2159 136 7 0 chr20 8876772 8877082 -63276800 + MER1B DNA MER1_type 28 339 0 180 125 0 0 chr20 8877513 8877545 -63276337 + (TG)n Simple_repeat Simple_repeat 2 33 0 247 24 24 24 chr20 8877920 8877961 -63275921 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 497 294 65 26 chr20 8877969 8878200 -63275682 + Charlie8 DNA MER1_type 150 389 -2028 623 268 156 73 chr20 8879320 8879805 -63274077 + LTR33 LTR ERVL 24 516 -7 370 373 43 19 chr20 8879880 8880089 -63273793 - MIR SINE MIR -2 260 47 487 330 89 26 chr20 8880107 8880223 -63273659 + L3 LINE CR1 1221 1328 -249 806 214 8 126 chr20 8880223 8880461 -63273421 + MER63A DNA MER1_type 1 210 0 487 330 89 26 chr20 8880461 8880647 -63273235 + L3 LINE CR1 1328 1542 -35 201 299 58 11 chr20 8880793 8880880 -63273002 + MIR SINE MIR 79 169 -93 22 0 0 0 chr20 8881066 8881088 -63272794 + AT_rich Low_complexity Low_complexity 1 22 0 187 195 73 0 chr20 8881938 8881979 -63271903 - L2 LINE L2 -12 3260 3217 * 248 299 239 27 chr20 8881950 8882134 -63271748 - MIR SINE MIR -21 241 19 2586 219 56 37 chr20 8882641 8883341 -63270541 + L1ME3A LINE L1 5420 6132 -38 248 158 18 0 chr20 8884910 8884967 -63268915 + GA-rich Low_complexity Low_complexity 1 58 0 555 279 107 17 chr20 8885757 8885990 -63267892 - MLT1J2 LTR MaLR -130 320 67 182 368 23 35 chr20 8886377 8886464 -63267418 - MIR SINE MIR -171 91 6 394 289 10 13 chr20 8886593 8886736 -63267146 + MLT1H LTR MaLR 57 167 -242 378 184 145 21 chr20 8886847 8886987 -63266895 + MLT1F1 LTR MaLR 427 550 -17 610 255 7 7 chr20 8887899 8888044 -63265838 - MER117 DNA MER1_type -52 145 1 2116 92 4 0 chr20 8890288 8890561 -63263321 - AluSp SINE Alu -3 310 37 1476 248 60 10 chr20 8890580 8890995 -63262887 - L1ME1 LINE L1 -5 6161 5726 2249 260 62 7 chr20 8891135 8891813 -63262069 + L1ME3A LINE L1 5420 6134 -36 2283 113 3 0 chr20 8891816 8892118 -63261764 + AluSq SINE Alu 3 305 -8 212 337 41 10 chr20 8893188 8893286 -63260596 + MIR SINE MIR 40 140 -68 711 230 23 40 chr20 8893353 8893412 -63260470 + MER5A DNA MER1_type 18 76 -113 1820 160 0 23 chr20 8893412 8893712 -63260170 + AluJo SINE Alu 3 295 -17 711 230 23 40 chr20 8893712 8893826 -63260056 + MER5A DNA MER1_type 76 188 -1 777 269 127 4 chr20 8894795 8895055 -63258827 - MLT1G1 LTR MaLR -19 576 285 668 231 27 41 chr20 8895055 8895202 -63258680 - AluJo SINE Alu -57 255 111 1172 241 44 0 chr20 8895202 8895472 -63258410 - MLT1G1 LTR MaLR -312 283 2 610 309 39 5 chr20 8895638 8895842 -63258040 - MIR SINE MIR -18 244 34 201 139 0 0 chr20 8895904 8895947 -63257935 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 840 188 7 0 chr20 8895947 8896101 -63257781 - L1MD3 LINE L1 -5 7990 7836 1006 207 102 53 chr20 8896102 8896475 -63257407 - MER57A LTR ERV1 0 403 1 1366 232 40 27 chr20 8896475 8896846 -63257036 - L1MD3 LINE L1 -157 7838 7463 24 32 0 0 chr20 8896964 8896995 -63256887 + AT_rich Low_complexity Low_complexity 1 31 0 1235 120 6 0 chr20 8896995 8897162 -63256720 - AluSx SINE Alu -140 172 5 246 317 26 26 chr20 8898653 8898767 -63255115 + MIR SINE MIR 42 154 -73 1256 168 20 72 chr20 8899653 8899722 -63254160 - MLT1C LTR MaLR 0 467 396 2865 13 0 0 chr20 8899722 8900033 -63253849 - AluYa5 SINE Alu 0 311 1 1256 168 20 72 chr20 8900033 8900255 -63253627 - MLT1C LTR MaLR -71 396 191 594 28 0 0 chr20 8900257 8900329 -63253553 + (TAGA)n Simple_repeat Simple_repeat 3 74 0 189 364 45 0 chr20 8900347 8900457 -63253425 - L3 LINE CR1 -62 1515 1401 805 300 44 31 chr20 8901138 8901455 -63252427 + MLT1I LTR MaLR 70 390 -19 286 329 17 68 chr20 8901522 8901759 -63252123 + L2 LINE L2 2305 2529 -785 * 496 317 60 70 chr20 8901756 8902226 -63251656 - L2 LINE L2 -1 3271 2807 531 313 107 5 chr20 8902349 8902573 -63251309 - MIR SINE MIR -10 252 6 252 336 60 0 chr20 8902753 8902887 -63250995 - L2 LINE L2 -836 2478 2337 369 0 0 0 chr20 8904411 8904452 -63249430 + (TG)n Simple_repeat Simple_repeat 1 41 0 255 133 0 0 chr20 8905494 8905539 -63248343 + (TC)n Simple_repeat Simple_repeat 2 46 0 326 245 238 7 chr20 8905804 8905947 -63247935 - MER5A DNA MER1_type -1 188 13 26 0 0 0 chr20 8906348 8906374 -63247508 + AT_rich Low_complexity Low_complexity 1 26 0 382 61 30 30 chr20 8906663 8906729 -63247153 + (TTTC)n Simple_repeat Simple_repeat 3 68 0 472 345 60 82 chr20 8907283 8907688 -63246194 + L2 LINE L2 2817 3212 -60 2120 135 0 7 chr20 8907688 8907991 -63245891 + AluSx SINE Alu 1 301 -11 472 345 60 82 chr20 8907991 8908051 -63245831 + L2 LINE L2 3212 3272 0 523 313 30 5 chr20 8908249 8908447 -63245435 - MIR SINE MIR -38 224 22 2409 88 0 3 chr20 8909764 8910069 -63243813 - AluSq SINE Alu -9 304 1 1792 129 4 0 chr20 8911544 8911800 -63242082 + AluSx SINE Alu 44 300 -12 1086 240 31 105 chr20 8912564 8912741 -63241141 - MLT1H LTR MaLR 0 549 360 327 49 0 0 chr20 8912741 8912782 -63241100 + (GGCTG)n Simple_repeat Simple_repeat 5 45 0 1086 240 31 105 chr20 8912782 8913117 -63240765 - MLT1H LTR MaLR -189 360 75 205 279 0 51 chr20 8916999 8917078 -63236804 + L2 LINE L2 3194 3268 -4 197 237 136 0 chr20 8917604 8917663 -63236219 - MIR3 SINE MIR -22 186 120 215 294 59 0 chr20 8919276 8919344 -63234538 + L2 LINE L2 3194 3265 -7 426 229 55 18 chr20 8921095 8921204 -63232678 - MIR SINE MIR -71 191 79 296 102 20 0 chr20 8921221 8921270 -63232612 + (GA)n Simple_repeat Simple_repeat 2 51 0 894 152 11 6 chr20 8921292 8921470 -63232412 + GA-rich Low_complexity Low_complexity 2 180 0 425 190 69 138 chr20 8921484 8921565 -63232317 + MER63A DNA MER1_type 43 107 -1581 1834 140 6 35 chr20 8921565 8921879 -63232003 - AluSx SINE Alu -7 305 1 425 190 69 138 chr20 8921879 8921971 -63231911 + MER63A DNA MER1_type 107 204 -6 327 308 19 10 chr20 8921980 8922084 -63231798 - MIR SINE MIR -146 116 12 276 235 59 12 chr20 8922942 8923027 -63230855 - MIR SINE MIR -51 211 123 500 299 77 15 chr20 8923047 8923481 -63230401 - LTR33 LTR ERVL -15 506 3 248 266 160 0 chr20 8923564 8923658 -63230224 + MIR SINE MIR 35 143 -65 336 102 0 0 chr20 8924082 8924131 -63229751 + (CA)n Simple_repeat Simple_repeat 2 50 0 911 263 108 50 chr20 8924698 8924886 -63228996 + LTR16C LTR ERVL 89 265 -226 3692 128 23 4 chr20 8924886 8925401 -63228481 + MER1A DNA MER1_type 3 527 0 911 263 108 50 chr20 8925401 8925593 -63228289 + LTR16C LTR ERVL 265 491 0 498 252 150 0 chr20 8925597 8925744 -63228138 - MER91A DNA MER1_type -27 169 1 5644 57 3 1 chr20 8925971 8926636 -63227246 - L1PA7 LINE L1 0 6154 5489 1807 45 18 0 chr20 8926637 8926923 -63226959 + L1PA7 LINE L1 5197 5486 -668 502 50 0 0 chr20 8926944 8927004 -63226878 + L1MB1 LINE L1 6106 6165 -3 465 295 65 0 chr20 8928199 8928338 -63225544 + MIR3 SINE MIR 56 203 -5 452 273 24 81 chr20 8928382 8928591 -63225291 - MIR SINE MIR 0 262 66 442 293 20 7 chr20 8928595 8928742 -63225140 - LTR33 LTR ERVL -7 514 366 713 277 47 22 chr20 8928792 8929070 -63224812 - LTR33 LTR ERVL -234 287 3 302 329 87 30 chr20 8929601 8929832 -63224050 + L2 LINE L2 2933 3176 -96 591 235 127 12 chr20 8929859 8930025 -63223857 - MIR SINE MIR 0 262 78 2537 53 10 0 chr20 8930053 8930353 -63223529 - AluY SINE Alu -8 303 1 253 243 0 29 chr20 8930471 8930541 -63223341 - L2 LINE L2 -10 3303 3236 183 100 0 0 chr20 8931247 8931277 -63222605 + (TG)n Simple_repeat Simple_repeat 1 30 0 1501 77 0 0 chr20 8931502 8931716 -63222166 + AluY SINE Alu 100 313 0 281 215 25 13 chr20 8931821 8931900 -63221982 + (TATATG)n Simple_repeat Simple_repeat 3 82 0 232 64 0 21 chr20 8931918 8931965 -63221917 + LTR66 LTR ERVL 394 439 -171 207 284 19 117 chr20 8932651 8932813 -63221069 + L2 LINE L2 2904 3049 -223 755 268 36 8 chr20 8932846 8933094 -63220788 - MIR SINE MIR -4 258 3 637 66 0 38 chr20 8933981 8934087 -63219795 + (GA)n Simple_repeat Simple_repeat 1 102 0 1842 250 27 36 chr20 8934388 8934944 -63218938 - L1ME1 LINE L1 -67 6099 5549 180 216 0 0 chr20 8935990 8936041 -63217841 + T-rich Low_complexity Low_complexity 1 51 0 557 316 61 4 chr20 8936196 8936424 -63217458 + LTR16C LTR ERVL 251 491 0 180 0 0 0 chr20 8937172 8937192 -63216690 + (CA)n Simple_repeat Simple_repeat 1 20 0 921 240 84 30 chr20 8938159 8938705 -63215177 - L1ME3A LINE L1 -6 6164 5557 404 278 134 21 chr20 8939706 8939900 -63213982 + MIR SINE MIR 42 257 -5 231 337 48 12 chr20 8940269 8940352 -63213530 - L2 LINE L2 -181 3091 3006 418 331 144 32 chr20 8940520 8941002 -63212880 - L2 LINE L2 -5 3308 2720 251 331 16 41 chr20 8943630 8943751 -63210131 - MIR3 SINE MIR -3 205 88 1898 100 7 15 chr20 8944343 8944613 -63209269 + AluSc SINE Alu 41 308 -1 322 239 0 0 chr20 8944854 8944925 -63208957 - MIR SINE MIR -9 253 183 326 141 0 16 chr20 8945611 8945675 -63208207 + (TA)n Simple_repeat Simple_repeat 1 63 0 243 246 161 101 chr20 8945764 8946081 -63207801 - MLT1H LTR MaLR -185 364 29 189 132 0 0 chr20 8946102 8946140 -63207742 + (TA)n Simple_repeat Simple_repeat 2 39 0 245 306 69 94 chr20 8946263 8946508 -63207374 - MIR SINE MIR -1 261 23 1586 199 31 9 chr20 8947173 8947500 -63206382 + MLT1A1 LTR MaLR 12 345 -20 254 278 56 0 chr20 8949205 8949349 -63204533 - MER103 DNA DNA -2 164 13 1508 248 122 24 chr20 8949578 8950118 -63203764 + MLT1G1 LTR MaLR 3 595 0 247 306 231 31 chr20 8950483 8950643 -63203239 + L2 LINE L2 3122 3313 0 428 282 0 8 chr20 8951105 8951229 -63202653 + MER94 DNA DNA 11 133 -1 4470 156 19 2 chr20 8951586 8952395 -63201487 - L1MC2 LINE L1 -9 6335 5514 948 92 7 7 chr20 8952429 8952571 -63201311 - L1PA7 LINE L1 -6 6148 6007 530 355 51 28 chr20 8952577 8952966 -63200916 - LTR33 LTR ERVL -99 422 25 211 326 92 20 chr20 8953215 8953313 -63200569 - L3b LINE CR1 -80 1503 1399 1169 153 22 61 chr20 8953593 8953821 -63200061 - MER20 DNA MER1_type 0 219 1 186 43 0 0 chr20 8954446 8954469 -63199413 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 228 118 0 0 chr20 8955105 8955139 -63198743 + (GA)n Simple_repeat Simple_repeat 2 35 0 682 121 0 23 chr20 8955139 8955271 -63198611 + (GGAA)n Simple_repeat Simple_repeat 4 132 0 643 145 75 0 chr20 8955682 8955841 -63198041 - Charlie5 DNA MER1_type -94 2518 2348 371 284 121 7 chr20 8956023 8956164 -63197718 + MIR3 SINE MIR 42 198 -10 2052 174 126 39 chr20 8956186 8956704 -63197178 + MLT1F1 LTR MaLR 5 567 0 648 358 9 0 chr20 8956837 8957055 -63196827 - MIR SINE MIR -2 260 41 214 276 192 32 chr20 8957456 8957612 -63196270 + L3b LINE CR1 1270 1450 -133 253 367 33 39 chr20 8957667 8957847 -63196035 + MIR SINE MIR 7 185 -77 379 314 7 36 chr20 8958477 8958617 -63195265 + MER63A DNA MER1_type 62 197 -13 911 279 61 74 chr20 8958704 8959242 -63194640 - MLT1F LTR MaLR 0 542 12 907 242 5 16 chr20 8959685 8959871 -63194011 + MER5A DNA MER1_type 1 184 -5 392 292 17 17 chr20 8959915 8960035 -63193847 - MIR3 SINE MIR -18 190 71 602 222 0 8 chr20 8960530 8960656 -63193226 - FLAM_C SINE Alu -18 125 1 2014 123 0 10 chr20 8961569 8961862 -63192020 - AluSx SINE Alu -1 311 22 1637 248 61 53 chr20 8961892 8962499 -63191383 + MLT1G LTR MaLR 5 578 -12 188 256 0 0 chr20 8962804 8962843 -63191039 + L2 LINE L2 3267 3305 -8 393 233 23 11 chr20 8962948 8963124 -63190758 + CT-rich Low_complexity Low_complexity 1 178 0 401 327 25 44 chr20 8963281 8963440 -63190442 + MER5A DNA MER1_type 31 186 -3 889 269 94 12 chr20 8963682 8964084 -63189798 + Charlie4a DNA MER1_type 41 475 -33 492 117 0 0 chr20 8964488 8964565 -63189317 + (TTCC)n Simple_repeat Simple_repeat 4 80 0 1972 145 3 7 chr20 8964574 8964877 -63189005 - AluSx SINE Alu -10 302 1 206 286 16 110 chr20 8964993 8965175 -63188707 - MIR SINE MIR -2 260 96 380 223 92 70 chr20 8965377 8965550 -63188332 - MIR SINE MIR -66 142 19 185 316 26 68 chr20 8966822 8966939 -63186943 - L2 LINE L2 -1317 1997 1886 582 109 0 0 chr20 8967217 8967309 -63186573 + (TCCA)n Simple_repeat Simple_repeat 1 92 0 181 152 0 0 chr20 8967313 8967346 -63186536 - L2 LINE L2 -2 3311 3279 239 303 0 0 chr20 8967617 8967683 -63186199 - L2 LINE L2 -7 3306 3241 267 289 72 47 chr20 8967823 8968154 -63185728 - L2 LINE L2 -314 2958 2549 1769 183 3 7 chr20 8968665 8968955 -63184927 - AluJo SINE Alu -23 289 1 658 159 203 18 chr20 8970296 8970459 -63183423 - L1PA15 LINE L1 -5 6160 5968 234 300 56 0 chr20 8970553 8970643 -63183239 + MER117 DNA MER1_type 100 194 -3 225 0 0 0 chr20 8970855 8970880 -63183002 + (TTA)n Simple_repeat Simple_repeat 3 27 0 2880 56 14 0 chr20 8970880 8971237 -63182645 - L1PA7 LINE L1 -18 6136 5775 313 319 142 21 chr20 8971251 8971533 -63182349 + L2 LINE L2 2199 2514 -800 2180 208 97 17 chr20 8971589 8972165 -63181717 - MLT1E3 LTR MaLR -1 623 2 627 267 8 21 chr20 8972238 8972393 -63181489 - LTR16C LTR ERVL 0 491 290 1724 163 46 6 chr20 8972393 8972719 -63181163 - MER44D DNA MER2_type 0 609 1 627 267 8 21 chr20 8972719 8972823 -63181059 - LTR16C LTR ERVL -201 290 186 681 279 48 24 chr20 8973077 8973328 -63180554 - MIR SINE MIR 0 262 6 301 372 19 6 chr20 8973375 8973531 -63180351 + L1MC2 LINE L1 5483 5640 -2168 238 205 60 24 chr20 8973588 8973671 -63180211 + L1MC2 LINE L1 5746 5831 -1977 1596 143 22 35 chr20 8973757 8974071 -63179811 + L1MC2 LINE L1 6026 6335 -9 213 94 0 0 chr20 8974706 8974738 -63179144 + (CAAT)n Simple_repeat Simple_repeat 3 34 0 187 171 29 0 chr20 8976295 8976330 -63177552 - MER5A DNA MER1_type -118 71 36 886 177 27 11 chr20 8976665 8976851 -63177031 + MER5A DNA MER1_type 1 189 0 459 282 16 0 chr20 8977047 8977171 -63176711 + MER94 DNA DNA 1 126 -8 680 131 16 8 chr20 8977484 8977606 -63176276 + MER65A LTR ERV1 323 445 0 1823 174 7 3 chr20 8978697 8978991 -63174891 + AluJb SINE Alu 1 295 -17 2129 111 4 0 chr20 8979255 8979630 -63174252 - AluSx SINE Alu 0 376 1 1654 183 20 0 chr20 8980584 8980885 -63172997 - AluSx SINE Alu -5 307 1 420 311 87 72 chr20 8981462 8981783 -63172099 + L3 LINE CR1 1178 1503 -74 233 259 0 0 chr20 8982654 8982712 -63171170 + (TG)n Simple_repeat Simple_repeat 2 59 0 728 324 122 17 chr20 8982734 8983250 -63170632 - L2 LINE L2 -2 3311 2754 243 79 0 0 chr20 8984189 8984227 -63169655 + (CAAA)n Simple_repeat Simple_repeat 3 40 0 185 0 0 39 chr20 8985706 8985732 -63168150 + (TTCA)n Simple_repeat Simple_repeat 4 28 0 384 295 40 46 chr20 8985733 8985819 -63168063 + L2 LINE L2 2141 2226 -1088 1399 249 0 10 chr20 8985819 8986132 -63167750 - AluJo SINE Alu -2 310 1 384 295 40 46 chr20 8986132 8986218 -63167664 + L2 LINE L2 2226 2312 -1002 743 239 114 30 chr20 8986224 8986550 -63167332 - MLT1F1 LTR MaLR -202 365 1 515 292 103 5 chr20 8986552 8986737 -63167145 + L2 LINE L2 2577 2779 -535 727 316 56 51 chr20 8986988 8987558 -63166324 + MLT1L LTR MaLR 43 615 0 1045 316 32 52 chr20 8987925 8988520 -63165362 + L2 LINE L2 2548 3129 -184 1908 197 34 12 chr20 8988520 8988936 -63164946 + MSTB LTR MaLR 1 425 -1 1045 316 32 52 chr20 8988936 8989117 -63164765 + L2 LINE L2 3129 3312 -1 207 347 20 31 chr20 8989145 8989243 -63164639 + MIR3 SINE MIR 98 194 -14 282 276 141 29 chr20 8989290 8989460 -63164422 + MIR SINE MIR 22 210 -52 1696 190 3 23 chr20 8989846 8990151 -63163731 - AluJo SINE Alu -13 299 1 216 261 0 0 chr20 8990489 8990535 -63163347 + CT-rich Low_complexity Low_complexity 2 47 0 2020 120 13 27 chr20 8991029 8991329 -63162553 + AluSx SINE Alu 1 296 -16 181 227 45 0 chr20 8991604 8991648 -63162234 + L2 LINE L2 3268 3313 0 354 270 230 14 chr20 8991912 8992060 -63161822 - MER5A DNA MER1_type -6 183 4 708 83 38 8 chr20 8992845 8992977 -63160905 + GA-rich Low_complexity Low_complexity 1 136 0 221 315 210 28 chr20 8994306 8994449 -63159433 + MIR SINE MIR 6 174 -88 826 123 31 15 chr20 8995195 8995325 -63158557 - AluJo/FRAM SINE Alu -14 298 167 346 196 0 0 chr20 8995325 8995381 -63158501 - Alu SINE Alu -252 56 1 353 306 174 27 chr20 8995572 8995830 -63158052 - L3 LINE CR1 -111 1466 1171 243 239 0 0 chr20 8995909 8995976 -63157906 + (TA)n Simple_repeat Simple_repeat 2 68 0 507 167 12 0 chr20 8996002 8996086 -63157796 - AluJ/FLAM SINE Alu -222 90 6 2218 102 3 0 chr20 8996209 8996503 -63157379 - AluSx SINE Alu -17 295 1 195 231 0 77 chr20 8996702 8996754 -63157128 - L2 LINE L2 0 3272 3225 209 339 179 25 chr20 8998303 8998866 -63155016 - L2 LINE L2 -2331 983 334 5954 46 17 5 chr20 8998907 8999691 -63154191 - L1PA7 LINE L1 0 6154 5362 439 259 167 17 chr20 9000132 9000306 -63153576 + MIR SINE MIR 58 257 -5 246 236 396 0 chr20 9001871 9001977 -63151905 + MER5A DNA MER1_type 41 188 -1 306 255 265 51 chr20 9002113 9002156 -63151726 + L2 LINE L2 2537 2569 -745 2148 122 10 0 chr20 9002156 9002452 -63151430 - AluSx SINE Alu -13 299 1 306 255 265 51 chr20 9002452 9002604 -63151278 + L2 LINE L2 2569 2774 -540 2045 125 30 0 chr20 9003256 9003552 -63150330 + AluSx SINE Alu 1 305 -7 4297 113 3 0 chr20 9003667 9004298 -63149584 - MER41B LTR ERV1 0 635 3 707 230 109 27 chr20 9004394 9004898 -63148984 + MLT1G1 LTR MaLR 5 542 0 29 28 0 0 chr20 9004898 9004934 -63148948 + AT_rich Low_complexity Low_complexity 1 36 0 2498 171 29 17 chr20 9005329 9005807 -63148075 - L1PA15 LINE L1 -4 6161 5678 2500 90 0 0 chr20 9006380 9006691 -63147191 - AluSx SINE Alu -1 311 1 358 307 11 0 chr20 9007020 9007108 -63146774 + L2 LINE L2 3223 3311 -2 423 301 82 10 chr20 9008025 9008221 -63145661 + LTR16C LTR ERVL 280 489 -2 667 213 128 11 chr20 9008279 9008467 -63145415 + MER63A DNA MER1_type 1 210 0 1564 201 62 0 chr20 9008580 9008868 -63145014 - AluJb SINE Alu -5 307 2 286 237 43 21 chr20 9008998 9009091 -63144791 - LTR33 LTR ERVL -14 507 413 237 331 32 35 chr20 9010989 9011145 -63142737 + MIR SINE MIR 68 228 -34 22 35 0 0 chr20 9012725 9012754 -63141128 + AT_rich Low_complexity Low_complexity 1 29 0 274 230 160 0 chr20 9013058 9013158 -63140724 + L1MC4 LINE L1 7926 8041 -1 383 278 71 10 chr20 9014115 9014313 -63139569 - L1ME LINE L1 -354 5767 5558 354 267 41 56 chr20 9014341 9014536 -63139346 - L1ME LINE L1 -2495 5500 5309 892 169 111 5 chr20 9016985 9017174 -63136708 + MER3 DNA MER1_type 1 209 0 4837 141 25 11 chr20 9017832 9018776 -63135106 - L1PB4 LINE L1 0 6156 5197 294 355 95 30 chr20 9019151 9019447 -63134435 - L2 LINE L2 -774 2540 2226 181 308 28 137 chr20 9019752 9019963 -63133919 + L2 LINE L2 2994 3181 -91 189 333 0 30 chr20 9020339 9020405 -63133477 + L2 LINE L2 3245 3308 -5 248 333 77 44 chr20 9021214 9021397 -63132485 - MIR3 SINE MIR -17 191 3 306 132 0 0 chr20 9022855 9022908 -63130974 + (CA)n Simple_repeat Simple_repeat 2 54 0 978 121 0 0 chr20 9023001 9023133 -63130749 + AluSq/x SINE Alu 1 132 -180 835 269 31 18 chr20 9023367 9023590 -63130292 + MIR SINE MIR 1 226 -36 212 175 0 0 chr20 9023874 9023914 -63129968 + T-rich Low_complexity Low_complexity 4 43 0 266 307 57 0 chr20 9025200 9025288 -63128594 + MER94 DNA DNA 27 119 -15 384 314 109 0 chr20 9025385 9025522 -63128360 - MIR SINE MIR -27 235 84 226 254 0 0 chr20 9025641 9025696 -63128186 + (TAAA)n Simple_repeat Simple_repeat 2 56 0 1731 76 0 13 chr20 9025723 9025947 -63127935 + AluY SINE Alu 1 221 -90 30 0 0 0 chr20 9026191 9026221 -63127661 + AT_rich Low_complexity Low_complexity 1 30 0 339 130 0 0 chr20 9026221 9026275 -63127607 + (CA)n Simple_repeat Simple_repeat 2 55 0 323 177 35 97 chr20 9026489 9026602 -63127280 + MIR SINE MIR 82 187 -75 1100 142 0 18 chr20 9026835 9027004 -63126878 - AluJb SINE Alu -9 303 138 614 280 15 37 chr20 9027315 9027583 -63126299 - L1ME LINE L1 -376 5794 5533 734 275 108 47 chr20 9027605 9027790 -63126092 + LTR16C LTR ERVL 1 173 -318 2211 106 3 0 chr20 9027790 9028083 -63125799 + AluSg SINE Alu 1 294 -16 734 275 108 47 chr20 9028083 9028323 -63125559 + LTR16C LTR ERVL 173 452 -39 194 156 0 0 chr20 9028426 9028458 -63125424 + L2 LINE L2 3191 3222 -91 233 324 68 54 chr20 9030165 9030313 -63123569 + L3b LINE CR1 1267 1416 -167 2437 74 7 0 chr20 9030356 9030654 -63123228 - AluY SINE Alu -11 300 1 2393 87 0 10 chr20 9030872 9031184 -63122698 + AluY SINE Alu 1 309 -2 2842 16 0 0 chr20 9031223 9031533 -63122349 + AluYb8 SINE Alu 1 310 -8 2307 67 0 29 chr20 9032099 9032411 -63121471 + AluY SINE Alu 1 303 -8 467 282 177 10 chr20 9032522 9032731 -63121151 - MIR SINE MIR 0 262 19 235 266 16 16 chr20 9036145 9036209 -63117673 - MIR3 SINE MIR -11 197 134 370 269 34 67 chr20 9036283 9036402 -63117480 + MIR3 SINE MIR 8 122 -86 2636 55 0 0 chr20 9036770 9037079 -63116803 + AluY SINE Alu 1 309 -2 270 310 63 51 chr20 9038866 9039024 -63114858 + MIR3 SINE MIR 10 169 -39 409 258 94 0 chr20 9040155 9040283 -63113599 - MIR SINE MIR -110 152 13 2272 92 10 0 chr20 9041265 9041559 -63112323 + AluSp SINE Alu 1 297 -16 1870 153 3 3 chr20 9042481 9042805 -63111077 - AluSx SINE Alu 0 324 1 238 265 15 0 chr20 9042836 9042904 -63110978 + (TGAA)n Simple_repeat Simple_repeat 1 69 0 412 261 23 86 chr20 9042911 9043097 -63110785 - MER5A DNA MER1_type 0 189 5 1941 135 44 10 chr20 9043332 9043628 -63110254 + AluSc SINE Alu 1 306 -3 199 330 170 19 chr20 9043802 9043908 -63109974 - L2 LINE L2 -4 3309 3188 198 118 0 0 chr20 9045178 9045212 -63108670 + (T)n Simple_repeat Simple_repeat 1 34 0 528 268 137 0 chr20 9045254 9045407 -63108475 - LTR16A LTR ERVL -119 331 158 321 274 117 85 chr20 9047989 9048077 -63105805 + HAL1 LINE L1 218 302 -2205 804 270 6 0 chr20 9048077 9048251 -63105631 - MER45A DNA AcHobo 0 178 4 321 274 117 85 chr20 9048251 9048385 -63105497 + HAL1 LINE L1 302 447 -2060 2413 89 3 0 chr20 9048521 9048825 -63105057 - AluY SINE Alu -6 305 1 392 222 261 39 chr20 9048991 9049194 -63104688 + MIR SINE MIR 3 250 -12 241 163 23 0 chr20 9049163 9049206 -63104676 + L2 LINE L2 3224 3267 -5 * 183 205 0 0 chr20 9049209 9049248 -63104634 + GA-rich Low_complexity Low_complexity 1 39 0 237 262 97 48 chr20 9049284 9049387 -63104495 + MIR SINE MIR 10 117 -145 387 176 22 34 chr20 9049393 9049482 -63104400 - MLT1H LTR MaLR 0 549 311 537 243 15 7 chr20 9049835 9049971 -63103911 + MIR SINE MIR 122 258 -4 456 303 73 33 chr20 9051225 9051499 -63102383 + LTR16A LTR ERVL 17 301 -149 2181 113 0 0 chr20 9051570 9051861 -63102021 - AluSc SINE Alu -18 291 1 340 271 207 7 chr20 9051931 9052071 -63101811 - MIR SINE MIR -29 233 66 510 242 87 19 chr20 9052382 9052543 -63101339 - LTR33 LTR ERVL -6 515 344 655 197 41 0 chr20 9052557 9052704 -63101178 + Charlie4 DNA MER1_type 1807 1959 -2 315 350 12 31 chr20 9053105 9053265 -63100617 - L2 LINE L2 -585 2729 2573 1113 268 100 11 chr20 9053333 9053702 -63100180 + LTR16C LTR ERVL 90 491 0 257 362 38 31 chr20 9053756 9054074 -63099808 - L2 LINE L2 -787 2527 2208 399 254 0 90 chr20 9054367 9054501 -63099381 + MER94 DNA DNA 1 122 -12 197 196 20 0 chr20 9054584 9054635 -63099247 + GA-rich Low_complexity Low_complexity 1 52 0 244 349 0 0 chr20 9054750 9054833 -63099049 + L2 LINE L2 3190 3272 0 2297 110 0 0 chr20 9055041 9055342 -63098540 + AluSg SINE Alu 1 301 -9 386 241 92 64 chr20 9055348 9055489 -63098393 + MIR SINE MIR 118 262 0 2033 128 31 0 chr20 9055912 9056039 -63097843 + AluSx SINE Alu 1 123 -189 180 0 0 0 chr20 9056039 9056059 -63097823 + (TAAAA)n Simple_repeat Simple_repeat 4 23 0 2033 128 31 0 chr20 9056059 9056221 -63097661 + AluSx SINE Alu 123 299 -13 829 199 78 5 chr20 9056660 9056851 -63097031 + MER3 DNA MER1_type 2 206 -3 542 331 209 21 chr20 9057013 9057538 -63096344 + L2 LINE L2 1995 2618 -696 509 316 118 15 chr20 9057737 9058000 -63095882 + L2 LINE L2 3005 3294 -19 22 0 0 0 chr20 9058324 9058346 -63095536 + AT_rich Low_complexity Low_complexity 1 22 0 29 70 0 0 chr20 9059116 9059173 -63094709 + AT_rich Low_complexity Low_complexity 1 57 0 399 274 72 13 chr20 9059967 9060120 -63093762 + MIR SINE MIR 44 205 -57 559 124 0 67 chr20 9060739 9060844 -63093038 - L1MD1 LINE L1 -8 6234 6137 3095 180 62 9 chr20 9060847 9061509 -63092373 - L1MD2 LINE L1 -276 6083 5387 269 274 11 0 chr20 9061869 9061964 -63091918 + (TA)n Simple_repeat Simple_repeat 1 96 0 1056 235 91 76 chr20 9062103 9062656 -63091226 + L1MC4 LINE L1 7344 7910 -132 288 0 0 0 chr20 9062656 9062688 -63091194 + (TG)n Simple_repeat Simple_repeat 2 33 0 1056 235 91 76 chr20 9062688 9062815 -63091067 + L1MC4 LINE L1 7910 8034 -8 262 269 52 67 chr20 9062929 9063063 -63090819 - MIR3 SINE MIR -52 156 25 553 289 119 64 chr20 9064091 9064402 -63089480 - L2 LINE L2 -1 3271 2944 461 156 10 52 chr20 9064629 9064725 -63089157 + MER5B DNA MER1_type 80 171 -7 4886 93 14 1 chr20 9064943 9065638 -63088244 - L1PB1 LINE L1 -4 6147 5444 1140 189 6 42 chr20 9065654 9065966 -63087916 + L1 LINE L1 5103 5403 -743 1607 184 3 52 chr20 9066003 9066313 -63087569 + AluJo SINE Alu 1 295 -17 219 261 14 14 chr20 9067348 9067417 -63086465 + CT-rich Low_complexity Low_complexity 3 71 0 247 283 0 0 chr20 9067958 9068018 -63085864 + T-rich Low_complexity Low_complexity 3 62 0 1775 161 109 13 chr20 9068487 9068873 -63085009 - MSTC LTR MaLR -5 423 1 972 239 92 52 chr20 9068873 9069166 -63084716 + Charlie4a DNA MER1_type 40 359 -1602 1268 144 27 9 chr20 9069166 9069388 -63084494 + L1PB1 LINE L1 5923 6148 -3 972 239 92 52 chr20 9069388 9069541 -63084341 + Charlie4a DNA MER1_type 359 504 -4 2287 87 10 0 chr20 9069800 9070098 -63083784 + AluSx SINE Alu 1 301 -11 390 259 17 9 chr20 9070492 9070608 -63083274 + Charlie4 DNA MER1_type 40 156 -1805 616 256 29 88 chr20 9070943 9071104 -63082778 + MIR SINE MIR 25 169 -93 2254 109 3 10 chr20 9071104 9071225 -63082657 + AluSx SINE Alu 1 121 -191 189 0 0 0 chr20 9071225 9071246 -63082636 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 2254 109 3 10 chr20 9071246 9071427 -63082455 + AluSx SINE Alu 121 301 -11 616 256 29 88 chr20 9071427 9071503 -63082379 + MIR SINE MIR 169 248 -14 200 350 110 20 chr20 9072143 9072243 -63081639 + MIR SINE MIR 36 144 -64 977 327 50 59 chr20 9073656 9074201 -63079681 + MLT1K LTR MaLR 47 586 -2 406 115 0 0 chr20 9074329 9074390 -63079492 - L1PA16 LINE L1 -3 6163 6103 261 328 64 0 chr20 9074626 9074751 -63079131 - MLT1I LTR MaLR -276 133 1 2218 73 0 14 chr20 9074945 9075258 -63078624 - AluY SINE Alu 0 309 1 1569 198 0 17 chr20 9075463 9075756 -63078126 + AluJo SINE Alu 1 288 -24 2318 75 0 0 chr20 9075767 9076085 -63077797 + AluY SINE Alu 1 318 0 197 368 0 26 chr20 9076159 9076273 -63077609 - MIR SINE MIR -147 115 5 21 0 0 0 chr20 9077804 9077825 -63076057 + AT_rich Low_complexity Low_complexity 1 21 0 784 134 31 8 chr20 9077995 9078122 -63075760 + L1PA8 LINE L1 6038 6167 -5 183 391 98 0 chr20 9078320 9078412 -63075470 - L2 LINE L2 -55 3217 3117 2684 33 0 0 chr20 9078552 9078858 -63075024 + AluY SINE Alu 1 306 -5 537 325 72 15 chr20 9078870 9079135 -63074747 + L2 LINE L2 2698 2977 -337 2629 49 0 0 chr20 9079261 9079566 -63074316 - AluY SINE Alu 0 311 7 418 285 54 54 chr20 9079575 9079908 -63073974 + MLT1I LTR MaLR 75 407 -2 275 297 162 7 chr20 9079976 9080124 -63073758 + L2 LINE L2 3113 3283 -30 1745 155 35 11 chr20 9081120 9081404 -63072478 + AluJo SINE Alu 1 291 -21 1492 298 5 0 chr20 9082533 9082919 -63070963 + LTR16C LTR ERVL 104 491 0 1795 173 3 3 chr20 9083628 9083917 -63069965 + AluJb SINE Alu 2 290 -22 2468 209 151 11 chr20 9084767 9085562 -63068320 - L1MD2 LINE L1 0 6359 5454 337 283 20 141 chr20 9086259 9086410 -63067472 - L1MEd LINE L1 -5191 928 831 2372 82 7 13 chr20 9086410 9086713 -63067169 - AluSx SINE Alu -11 301 1 337 283 20 141 chr20 9086713 9086865 -63067017 - L1MEd LINE L1 -5288 831 662 25 31 0 0 chr20 9087099 9087131 -63066751 + AT_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr20 9087757 9087778 -63066104 + AT_rich Low_complexity Low_complexity 1 21 0 243 119 0 0 chr20 9088024 9088066 -63065816 + MLT1G1 LTR MaLR 16 57 -538 1535 124 5 0 chr20 9088067 9088277 -63065605 - AluSg/x SINE Alu -7 303 93 981 126 7 7 chr20 9088296 9088439 -63065443 - AluSq/x SINE Alu -170 143 1 1079 269 160 25 chr20 9088440 9088920 -63064962 + MLT1G1 LTR MaLR 51 595 0 195 343 107 29 chr20 9089510 9089650 -63064232 - L2 LINE L2 0 3272 3122 313 263 50 0 chr20 9089915 9090014 -63063868 - L1MC/D LINE L1 -351 5770 5665 2199 110 13 0 chr20 9090058 9090357 -63063525 - AluSx SINE Alu -7 305 3 341 257 18 28 chr20 9090498 9090607 -63063275 + CT-rich Low_complexity Low_complexity 2 109 0 21 89 0 0 chr20 9090616 9090672 -63063210 + AT_rich Low_complexity Low_complexity 1 56 0 635 270 13 0 chr20 9091716 9091868 -63062014 - MER91B DNA MER1_type -35 155 2 548 323 35 19 chr20 9093488 9093745 -63060137 + MIR SINE MIR 2 262 0 214 204 284 34 chr20 9093755 9093843 -63060039 + MIR3 SINE MIR 96 205 -3 1633 86 0 19 chr20 9094754 9094963 -63058919 + AluY SINE Alu 1 205 -106 418 267 167 27 chr20 9095818 9095968 -63057914 + MER5A DNA MER1_type 10 180 -9 324 341 0 0 chr20 9096109 9096197 -63057685 + MIR SINE MIR 37 124 -84 272 158 37 12 chr20 9096741 9096823 -63057059 + (TA)n Simple_repeat Simple_repeat 2 85 0 185 414 45 8 chr20 9097026 9097159 -63056723 + L2 LINE L2 3171 3308 -5 223 273 15 0 chr20 9098520 9098586 -63055296 + (TATATG)n Simple_repeat Simple_repeat 1 67 0 276 241 0 0 chr20 9098587 9098666 -63055216 + (TA)n Simple_repeat Simple_repeat 2 80 0 213 245 0 0 chr20 9098907 9098956 -63054926 - L2 LINE L2 -4 3309 3261 41 66 0 0 chr20 9099100 9099176 -63054706 + AT_rich Low_complexity Low_complexity 1 76 0 489 263 160 5 chr20 9099523 9099736 -63054146 + L1MC4a LINE L1 5604 5849 -1959 25 65 0 0 chr20 9099767 9099813 -63054069 + AT_rich Low_complexity Low_complexity 1 46 0 1857 151 0 26 chr20 9099833 9100138 -63053744 - AluSx SINE Alu -15 297 1 2095 112 33 3 chr20 9100756 9101059 -63052823 + AluSq SINE Alu 2 313 0 193 91 68 0 chr20 9101059 9101103 -63052779 + A-rich Low_complexity Low_complexity 4 180 0 328 293 37 53 chr20 9101123 9101311 -63052571 + Charlie8 DNA MER1_type 86 270 -2147 553 309 27 45 chr20 9101426 9101866 -63052016 + L1MC4a LINE L1 4733 5164 -982 2180 100 0 13 chr20 9101868 9102169 -63051713 + AluSx SINE Alu 1 297 -15 2562 245 34 28 chr20 9102245 9102714 -63051168 + L1MC4a LINE L1 5255 5732 -2076 2080 106 0 45 chr20 9102714 9103026 -63050856 + AluSq SINE Alu 1 298 -15 2562 245 34 28 chr20 9103026 9103316 -63050566 + L1MC4a LINE L1 5732 6019 -1789 333 62 0 0 chr20 9103329 9103377 -63050505 + (TG)n Simple_repeat Simple_repeat 2 49 0 4198 214 90 88 chr20 9103379 9104250 -63049632 + L1MC4a LINE L1 6202 7077 -731 2136 116 3 0 chr20 9104250 9104544 -63049338 + AluSq SINE Alu 1 295 -18 4198 214 90 88 chr20 9104544 9105277 -63048605 + L1MC4a LINE L1 7077 7808 0 198 103 0 0 chr20 9108518 9108547 -63045335 + (TC)n Simple_repeat Simple_repeat 2 30 0 4066 204 13 28 chr20 9108858 9109790 -63044092 - L1MB4 LINE L1 -1 6179 5262 208 238 25 25 chr20 9109881 9109961 -63043921 + (TATATG)n Simple_repeat Simple_repeat 3 82 0 531 221 169 0 chr20 9110151 9110305 -63043577 + MIR SINE MIR 12 191 -71 21 0 0 0 chr20 9111389 9111410 -63042472 + AT_rich Low_complexity Low_complexity 1 21 0 1565 143 0 0 chr20 9114131 9114354 -63039528 + AluSx SINE Alu 3 225 -87 23 0 0 0 chr20 9114481 9114504 -63039378 + AT_rich Low_complexity Low_complexity 1 23 0 332 313 0 27 chr20 9115391 9115503 -63038379 - MIR SINE MIR -105 157 49 1819 266 96 10 chr20 9117198 9117699 -63036183 + MLT1H LTR MaLR 6 549 0 1520 228 35 41 chr20 9117898 9118333 -63035549 + MLT1C LTR MaLR 36 467 0 595 226 315 22 chr20 9118955 9119269 -63034613 + L2 LINE L2 2908 3313 0 337 281 26 53 chr20 9119698 9119812 -63034070 - MIR3 SINE MIR -21 187 77 195 100 0 0 chr20 9119857 9119887 -63033995 + (TG)n Simple_repeat Simple_repeat 1 30 0 7698 22 0 0 chr20 9120364 9121453 -63032429 - L1PA3 LINE L1 -3 6152 5064 13224 33 0 0 chr20 9121453 9123075 -63030807 + L1P LINE L1 2288 3909 -2237 582 221 168 0 chr20 9124249 9124398 -63029484 + MER5A DNA MER1_type 9 182 -7 431 246 44 110 chr20 9124794 9125066 -63028816 - MER112 DNA MER1_type -2 254 1 249 57 0 0 chr20 9126782 9126817 -63027065 + (TG)n Simple_repeat Simple_repeat 1 35 0 844 162 100 189 chr20 9128132 9128571 -63025311 + MER57A LTR ERV1 3 402 -1 478 309 0 8 chr20 9128579 9128705 -63025177 - MER5B DNA MER1_type -52 126 2 21 71 0 0 chr20 9128805 9128847 -63025035 + AT_rich Low_complexity Low_complexity 1 42 0 21 0 0 0 chr20 9131825 9131846 -63022036 + AT_rich Low_complexity Low_complexity 1 21 0 205 167 0 0 chr20 9131882 9131918 -63021964 + (ATG)n Simple_repeat Simple_repeat 1 36 0 1655 277 31 16 chr20 9132576 9133147 -63020735 + L1MB7 LINE L1 1081 1660 -4724 * 5941 191 31 59 chr20 9133133 9134633 -63019249 + L1MC3 LINE L1 5513 6971 -814 1914 168 55 44 chr20 9134633 9135191 -63018691 - MLT2A2 LTR ERVL 0 554 1 3447 205 28 11 chr20 9135191 9135980 -63017902 + L1MC3 LINE L1 6967 7768 -17 551 280 6 17 chr20 9135986 9136161 -63017721 + L1MB7 LINE L1 1652 1824 -4560 249 273 0 0 chr20 9136176 9136253 -63017629 + (TA)n Simple_repeat Simple_repeat 1 77 0 1655 281 56 22 chr20 9136260 9137305 -63016577 + L1MB7 LINE L1 1965 3052 -3330 4635 231 45 52 chr20 9137378 9139047 -63014835 + L1MB7 LINE L1 3619 5275 -1107 547 241 9 0 chr20 9139072 9139188 -63014694 + AluJb SINE Alu 132 248 -64 * 668 170 0 0 chr20 9139186 9139298 -63014584 - AluJo/FLAM SINE Alu -200 112 1 3643 197 49 7 chr20 9139301 9139685 -63014197 + L1MB7 LINE L1 5258 5625 -795 2089 116 3 0 chr20 9139685 9140005 -63013877 + AluSp SINE Alu 1 321 0 3643 197 49 7 chr20 9140005 9140658 -63013224 + L1MB7 LINE L1 5625 6344 -76 25 51 0 0 chr20 9140725 9140764 -63013118 + AT_rich Low_complexity Low_complexity 1 39 0 1029 215 0 5 chr20 9140764 9140964 -63012918 - MER2 DNA MER2_type -139 206 8 398 169 67 0 chr20 9140964 9141053 -63012829 + L1MB8 LINE L1 6082 6176 -2 845 264 45 45 chr20 9141098 9141412 -63012470 - MLT1A1 LTR MaLR 0 365 52 456 260 182 19 chr20 9142570 9142724 -63011158 - MER5A DNA MER1_type -1 188 10 262 348 54 5 chr20 9143354 9143733 -63010149 + LTR16B LTR ERVL 9 452 -9 228 146 0 0 chr20 9144689 9144730 -63009152 + AluJb SINE Alu 256 296 -5 1741 150 7 3 chr20 9144786 9145073 -63008809 - AluSx SINE Alu -1 311 24 1005 226 99 36 chr20 9145115 9145500 -63008382 - LTR37A LTR ERV1 -17 409 1 246 267 27 0 chr20 9145695 9145770 -63008112 + L1ME1 LINE L1 6080 6156 -10 303 272 210 31 chr20 9145823 9146018 -63007864 + L1ME LINE L1 5482 5711 -455 219 295 16 0 chr20 9146180 9146241 -63007641 + MIR SINE MIR 78 139 -69 25 0 0 0 chr20 9146241 9146266 -63007616 + AT_rich Low_complexity Low_complexity 1 25 0 5116 101 0 7 chr20 9146268 9147012 -63006870 - L1PB1 LINE L1 -2 6149 5411 24 0 0 0 chr20 9147428 9147452 -63006430 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr20 9148687 9148708 -63005174 + AT_rich Low_complexity Low_complexity 1 21 0 676 189 0 23 chr20 9148810 9148942 -63004940 + FLAM_C SINE Alu 5 133 0 223 183 49 7 chr20 9149009 9149151 -63004731 + (TA)n Simple_repeat Simple_repeat 2 149 0 23 33 0 0 chr20 9149151 9149181 -63004701 + AT_rich Low_complexity Low_complexity 1 30 0 300 242 73 65 chr20 9149288 9149412 -63004470 - HAL1b LINE L1 -82 1266 1142 256 305 9 9 chr20 9149447 9149552 -63004330 + CT-rich Low_complexity Low_complexity 4 108 0 1621 193 17 32 chr20 9150023 9150370 -63003512 - MER2 DNA MER2_type -1 343 2 21 0 0 0 chr20 9150627 9150648 -63003234 + AT_rich Low_complexity Low_complexity 1 21 0 378 346 32 10 chr20 9153207 9153453 -63000429 + L2 LINE L2 2740 2989 -283 2005 188 57 5 chr20 9153479 9153884 -62999998 + MSTB LTR MaLR 1 426 0 4157 232 85 55 chr20 9153886 9155197 -62998685 + MSTB-int LTR MaLR 3 1352 -228 295 137 0 123 chr20 9155260 9155333 -62998549 - MST-int LTR MaLR -1005 646 583 416 151 0 14 chr20 9155412 9155485 -62998397 - MST-int LTR MaLR -997 654 583 998 189 58 10 chr20 9155488 9155694 -62998188 + MSTB-int LTR MaLR 1436 1651 0 2165 178 28 19 chr20 9155694 9156116 -62997766 + MSTB LTR MaLR 1 426 0 251 246 62 0 chr20 9156179 9156244 -62997638 - LTR33A LTR ERVL -153 370 302 475 299 63 31 chr20 9156301 9156511 -62997371 - LTR33 LTR ERVL -318 203 3 2553 68 0 0 chr20 9157541 9157852 -62996030 + AluY SINE Alu 1 311 0 339 279 39 101 chr20 9157904 9158162 -62995720 + L1ME3 LINE L1 1089 1329 -5097 336 256 44 48 chr20 9158168 9158460 -62995422 + L1ME3 LINE L1 1193 1683 -4924 1544 203 4 0 chr20 9158536 9158802 -62995080 - AluJb SINE Alu -39 273 7 296 290 146 41 chr20 9158830 9159192 -62994690 + L1ME3 LINE L1 1865 2264 -4343 249 25 50 0 chr20 9159309 9159349 -62994533 + Alu SINE Alu 257 298 -3 1073 263 113 42 chr20 9159372 9160505 -62993377 + L1ME3 LINE L1 2390 3602 -2824 1617 283 98 29 chr20 9160555 9163033 -62990849 + L1ME3 LINE L1 3685 6378 -64 237 158 35 18 chr20 9163049 9163106 -62990776 + (TA)n Simple_repeat Simple_repeat 1 58 0 2128 256 47 11 chr20 9163106 9163638 -62990244 - MLT1F1 LTR MaLR -10 557 7 207 69 0 0 chr20 9163644 9163673 -62990209 + (CA)n Simple_repeat Simple_repeat 2 30 0 2419 260 58 13 chr20 9163814 9164716 -62989166 + L1ME1 LINE L1 5225 6163 -3 1098 223 65 87 chr20 9164758 9165161 -62988721 + MSTD LTR MaLR 3 396 0 1556 272 86 2 chr20 9165373 9165792 -62988090 - MLT1H LTR MaLR -8 541 88 397 191 54 176 chr20 9165801 9165923 -62987959 + MER97a DNA MER1_type? 1 90 -804 2401 60 3 0 chr20 9165923 9166223 -62987659 + AluY SINE Alu 3 303 -8 397 191 54 176 chr20 9166223 9166304 -62987578 + MER97a DNA MER1_type? 90 179 -715 184 345 76 41 chr20 9167161 9167332 -62986550 + L2 LINE L2 2915 3091 -181 23 33 0 0 chr20 9167688 9167718 -62986164 + AT_rich Low_complexity Low_complexity 1 30 0 2206 101 7 0 chr20 9168859 9169156 -62984726 + AluSp SINE Alu 1 299 -14 1901 241 97 32 chr20 9169186 9169772 -62984110 - MLT1E2 LTR MaLR 0 626 3 2624 264 38 14 chr20 9169950 9170837 -62983045 + L1MC4 LINE L1 6978 7886 -156 991 253 12 52 chr20 9170961 9171289 -62982593 + L1ME3 LINE L1 5473 5787 -377 660 254 15 5 chr20 9171349 9171546 -62982336 + L1MC4 LINE L1 7310 7508 -534 726 262 55 75 chr20 9171581 9171966 -62981916 + L1ME3 LINE L1 5779 6155 -7 24 0 0 0 chr20 9173274 9173298 -62980584 + AT_rich Low_complexity Low_complexity 1 24 0 540 223 36 54 chr20 9173500 9173666 -62980216 + MER20 DNA MER1_type 4 166 -53 22 35 0 0 chr20 9174035 9174064 -62979818 + AT_rich Low_complexity Low_complexity 1 29 0 405 0 0 0 chr20 9174140 9174185 -62979697 + (CA)n Simple_repeat Simple_repeat 2 46 0 1636 149 19 39 chr20 9174186 9174495 -62979387 - L1MA4A LINE L1 -21 6282 5980 217 169 138 31 chr20 9174767 9174832 -62979050 - MIR SINE MIR -6 256 185 250 346 68 23 chr20 9174915 9175048 -62978834 - MIR SINE MIR -113 149 11 615 323 154 45 chr20 9175605 9176454 -62977428 - L2 LINE L2 -5 3267 2305 2260 98 0 3 chr20 9176517 9176812 -62977070 - AluSg SINE Alu -16 294 1 829 186 19 6 chr20 9176831 9176992 -62976890 + MER3 DNA MER1_type 1 163 -46 1344 218 13 67 chr20 9177038 9177414 -62976468 + MLT1A2 LTR MaLR 15 370 -4 209 275 62 38 chr20 9177425 9177505 -62976377 - L2 LINE L2 -34 3279 3198 181 225 22 11 chr20 9177568 9177657 -62976225 + GA-rich Low_complexity Low_complexity 1 90 0 456 310 113 78 chr20 9177658 9178236 -62975646 - L2 LINE L2 -1135 2179 1566 2542 96 28 6 chr20 9178236 9178592 -62975290 - THE1B LTR MaLR 0 364 1 456 310 113 78 chr20 9178592 9178771 -62975111 - L2 LINE L2 -1748 1566 1395 210 209 0 75 chr20 9179010 9179025 -62974857 + GA-rich Low_complexity Low_complexity 3 18 -46 2171 134 3 0 chr20 9179025 9179331 -62974551 + AluSx SINE Alu 1 307 -5 210 209 0 75 chr20 9179331 9179382 -62974500 + GA-rich Low_complexity Low_complexity 18 64 0 2079 138 26 0 chr20 9180702 9181006 -62972876 + AluSx SINE Alu 1 312 0 234 0 0 0 chr20 9181174 9181200 -62972682 + (T)n Simple_repeat Simple_repeat 1 26 0 1689 134 77 0 chr20 9181667 9181964 -62971918 - AluSx SINE Alu 0 317 1 198 345 0 0 chr20 9182093 9182151 -62971731 - L2 LINE L2 -1 3271 3214 24 32 0 0 chr20 9182482 9182513 -62971369 + AT_rich Low_complexity Low_complexity 1 31 0 269 239 37 46 chr20 9182513 9182622 -62971260 + MER103 DNA DNA 59 166 0 347 283 279 21 chr20 9182886 9183169 -62970713 - L3 LINE CR1 -126 1451 1096 289 308 221 28 chr20 9183223 9183545 -62970337 - L3 LINE CR1 -632 945 562 832 163 8 143 chr20 9184026 9184278 -62969604 - MER20 DNA MER1_type -1 218 1 427 145 0 40 chr20 9184500 9184576 -62969306 + Charlie3 DNA MER1_type 2637 2709 -1 279 0 0 0 chr20 9187869 9187900 -62965982 + (CA)n Simple_repeat Simple_repeat 1 31 0 406 300 45 37 chr20 9188402 9188604 -62965278 + MIR SINE MIR 20 232 -30 2506 119 11 3 chr20 9189927 9190297 -62963585 - THE1C LTR MaLR 0 375 3 9241 129 36 52 chr20 9190307 9191392 -62962490 - THE1C-int LTR MaLR -9 1571 519 2389 62 0 0 chr20 9191392 9191680 -62962202 - AluY SINE Alu -2 309 22 9241 129 36 52 chr20 9191680 9192191 -62961691 - THE1C-int LTR MaLR -1061 519 1 2378 119 10 44 chr20 9192191 9192579 -62961303 - THE1C LTR MaLR 0 375 1 29 78 0 0 chr20 9192930 9192994 -62960888 + AT_rich Low_complexity Low_complexity 1 64 0 238 418 0 0 chr20 9193026 9193136 -62960746 + MIR SINE MIR 46 155 -107 1415 191 36 22 chr20 9193566 9193844 -62960038 - AluJo SINE Alu -30 282 1 270 81 0 0 chr20 9194925 9194962 -62958920 + (CA)n Simple_repeat Simple_repeat 2 38 0 218 241 11 0 chr20 9195033 9195120 -62958762 + (TA)n Simple_repeat Simple_repeat 2 89 0 234 318 15 0 chr20 9196743 9196809 -62957073 - L2 LINE L2 0 3313 3247 22 70 0 0 chr20 9198751 9198794 -62955088 + AT_rich Low_complexity Low_complexity 1 43 0 198 171 0 0 chr20 9199447 9199488 -62954394 + (CA)n Simple_repeat Simple_repeat 2 42 0 250 232 0 36 chr20 9200146 9200202 -62953680 + L2 LINE L2 3207 3260 -12 368 366 67 5 chr20 9201366 9201560 -62952322 + MIR SINE MIR 47 252 -10 202 98 24 49 chr20 9201580 9201621 -62952261 + (TTG)n Simple_repeat Simple_repeat 3 42 0 590 332 74 16 chr20 9201678 9201922 -62951960 + MIR SINE MIR 5 262 0 529 198 83 13 chr20 9202690 9202847 -62951035 + L1MDa LINE L1 1696 1863 -4677 2507 158 30 20 chr20 9202847 9203411 -62950471 - MER41B LTR ERV1 0 635 1 994 242 180 39 chr20 9203411 9203928 -62949954 + L1MDa LINE L1 1860 2449 -4091 4574 243 67 49 chr20 9203945 9204859 -62949023 + L1MDa LINE L1 2830 3726 -2814 2191 122 3 0 chr20 9204859 9205163 -62948719 + AluSq SINE Alu 1 305 -8 4574 243 67 49 chr20 9205163 9205461 -62948421 + L1MDa LINE L1 3726 4017 -2523 192 77 0 0 chr20 9205461 9205487 -62948395 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 4574 243 67 49 chr20 9205487 9206417 -62947465 + L1MDa LINE L1 4017 5011 -1529 756 276 18 25 chr20 9206403 9206421 -62947461 - L1M4 LINE L1 -1224 4922 4905 * 2730 128 20 39 chr20 9206421 9206928 -62946954 - L1MA7 LINE L1 -10 6281 5785 756 276 18 25 chr20 9206928 9207184 -62946698 - L1M4 LINE L1 -1241 4905 4650 * 4688 173 44 19 chr20 9207171 9208105 -62945777 - L1MA7 LINE L1 -752 5394 4430 2241 125 0 6 chr20 9208105 9208418 -62945464 - AluSx SINE Alu 0 312 2 4688 173 44 19 chr20 9208418 9208510 -62945372 - L1MA7 LINE L1 -1716 4430 4342 1801 255 44 16 chr20 9208508 9209219 -62944663 + L1MDa LINE L1 4998 5733 -841 * 1255 191 14 97 chr20 9209208 9209559 -62944323 + L1MD2 LINE L1 6037 6358 -1 * 186 184 0 0 chr20 9210520 9210558 -62943324 + L2 LINE L2 3276 3313 0 427 315 95 17 chr20 9210942 9211183 -62942699 - MIR SINE MIR -2 260 1 188 339 32 0 chr20 9211188 9211250 -62942632 + MIR3 SINE MIR 139 202 -6 2158 112 32 61 chr20 9211691 9211764 -62942118 - THE1B LTR MaLR 0 364 290 2135 51 0 111 chr20 9211764 9212096 -62941786 + AluY SINE Alu 1 295 -16 2158 112 32 61 chr20 9212096 9212397 -62941485 - THE1B LTR MaLR -74 290 1 1555 186 58 0 chr20 9213193 9213312 -62940570 + AluJo SINE Alu 1 112 -200 189 0 0 0 chr20 9213312 9213333 -62940549 + (TAAA)n Simple_repeat Simple_repeat 3 23 0 1555 186 58 0 chr20 9213333 9213487 -62940395 + AluJo SINE Alu 112 290 -22 348 140 87 0 chr20 9213610 9213644 -62940238 + L1M4 LINE L1 5227 5257 -900 246 62 0 0 chr20 9213644 9213676 -62940206 + (CA)n Simple_repeat Simple_repeat 2 33 0 348 140 87 0 chr20 9213676 9213737 -62940145 + L1M4 LINE L1 5257 5340 -817 794 209 13 6 chr20 9213867 9214025 -62939857 + L1MB5 LINE L1 5976 6134 -40 273 256 0 0 chr20 9214628 9214710 -62939172 + (TATATG)n Simple_repeat Simple_repeat 3 84 0 188 108 0 27 chr20 9215262 9215299 -62938583 + (TAAA)n Simple_repeat Simple_repeat 3 38 0 662 209 60 45 chr20 9215697 9215898 -62937984 + MER3 DNA MER1_type 6 209 0 909 247 5 0 chr20 9216554 9216740 -62937142 - MER5A DNA MER1_type -2 187 1 3594 52 0 0 chr20 9216742 9217185 -62936697 + L1PA5 LINE L1 5701 6143 -11 424 198 25 0 chr20 9217387 9217468 -62936414 - MER5A DNA MER1_type -78 111 29 1998 125 7 4 chr20 9217800 9218103 -62935779 + AluSx SINE Alu 5 308 0 282 197 0 16 chr20 9221032 9221093 -62932789 - L1M4 LINE L1 -477 5697 5638 * 998 199 29 42 chr20 9221085 9221326 -62932556 + L1MB5 LINE L1 5930 6167 -7 363 271 35 69 chr20 9221917 9222061 -62931821 - MIR SINE MIR -50 212 74 2038 127 10 58 chr20 9222070 9222464 -62931418 - THE1C LTR MaLR 0 375 1 1210 193 161 67 chr20 9223159 9223605 -62930277 - MLT1D LTR MaLR 0 505 18 436 252 21 42 chr20 9223932 9224075 -62929807 + MIR SINE MIR 77 216 -46 1983 271 66 47 chr20 9224555 9225150 -62928732 - HAL1 LINE L1 -590 1917 1335 637 199 8 23 chr20 9225150 9225281 -62928601 - FLAM_A SINE Alu -4 129 1 1983 271 66 47 chr20 9225281 9225838 -62928044 - HAL1 LINE L1 -1172 1335 743 1726 179 89 0 chr20 9226186 9226510 -62927372 + MSTA LTR MaLR 76 428 0 207 69 0 0 chr20 9226525 9226554 -62927328 + (T)n Simple_repeat Simple_repeat 1 29 0 3299 141 13 30 chr20 9226799 9227360 -62926522 - L1PA15 LINE L1 0 6165 5613 2221 122 3 0 chr20 9227360 9227672 -62926210 - AluSp SINE Alu 0 313 1 3299 141 13 30 chr20 9227672 9227720 -62926162 - L1PA15 LINE L1 -552 5613 5566 5964 227 26 27 chr20 9227720 9229932 -62923950 - L1PA13 LINE L1 -3036 3761 1535 481 259 22 44 chr20 9229931 9230066 -62923816 - L1PA13 LINE L1 -6564 223 92 * 25 90 0 0 chr20 9230837 9230904 -62922978 + AT_rich Low_complexity Low_complexity 1 67 0 10761 32 2 1 chr20 9231384 9233448 -62920434 + L1PA4 LINE L1 4092 6155 0 433 302 60 7 chr20 9233586 9233735 -62920147 - MIR SINE MIR -74 188 32 348 317 35 18 chr20 9234577 9234804 -62919078 + L1ME4a LINE L1 5515 5745 -376 358 213 107 41 chr20 9234826 9234948 -62918934 + L1ME4a LINE L1 5974 6103 -18 183 359 77 26 chr20 9235094 9235211 -62918671 - L2 LINE L2 -188 3084 2962 1875 89 114 0 chr20 9235522 9235793 -62918089 + AluSc SINE Alu 1 302 -7 1759 144 75 39 chr20 9236333 9236695 -62917187 - THE1C LTR MaLR 0 375 1 9536 127 20 44 chr20 9236696 9237884 -62915998 - THE1C-int LTR MaLR -1 1579 437 1992 141 3 3 chr20 9237884 9238202 -62915680 + AluSx SINE Alu 1 318 0 9536 127 20 44 chr20 9238202 9238629 -62915253 - THE1C-int LTR MaLR -1143 437 1 1678 151 91 26 chr20 9238629 9238981 -62914901 - THE1C LTR MaLR 0 375 1 193 333 91 30 chr20 9241933 9242065 -62911817 - MIR3 SINE MIR -53 155 16 23 0 0 0 chr20 9242356 9242379 -62911503 + AT_rich Low_complexity Low_complexity 1 23 0 2418 77 3 3 chr20 9242568 9242879 -62911003 - AluY SINE Alu 0 311 1 23 78 0 0 chr20 9243251 9243302 -62910580 + AT_rich Low_complexity Low_complexity 1 51 0 623 292 171 13 chr20 9243532 9243837 -62910045 + MLT1K LTR MaLR 173 525 -63 221 0 0 33 chr20 9244277 9244307 -62909575 + (TAA)n Simple_repeat Simple_repeat 2 30 0 190 374 58 19 chr20 9244414 9244569 -62909313 + L2 LINE L2 2865 3025 -247 1299 221 10 3 chr20 9247882 9248190 -62905692 - MER33 DNA MER1_type 0 324 15 180 277 46 15 chr20 9248560 9248625 -62905257 + L2 LINE L2 3194 3260 -12 22 0 0 0 chr20 9248959 9248981 -62904901 + AT_rich Low_complexity Low_complexity 1 22 0 483 232 42 36 chr20 9249215 9249383 -62904499 + MIR SINE MIR 91 259 -3 205 365 17 26 chr20 9250368 9250483 -62903399 + MIR SINE MIR 29 142 -120 1666 172 34 30 chr20 9250736 9251033 -62902849 + AluJo SINE Alu 1 298 -14 201 290 84 46 chr20 9251060 9251191 -62902691 - MIR SINE MIR -46 216 81 307 390 13 6 chr20 9251646 9251805 -62902077 + MIR SINE MIR 37 196 -66 189 0 0 0 chr20 9251932 9251953 -62901929 + (TTA)n Simple_repeat Simple_repeat 2 22 0 365 371 45 0 chr20 9253417 9253619 -62900263 + MIR SINE MIR 51 261 -1 31 58 0 0 chr20 9255776 9255828 -62898054 + AT_rich Low_complexity Low_complexity 1 52 0 184 91 45 0 chr20 9256102 9256146 -62897736 + (TA)n Simple_repeat Simple_repeat 1 46 0 2392 84 0 3 chr20 9256378 9256677 -62897205 - AluSc SINE Alu -11 298 1 822 316 68 38 chr20 9257162 9258003 -62895879 - L2 LINE L2 -1 3312 2437 1109 185 99 30 chr20 9258585 9258887 -62894995 - MER33 DNA MER1_type 0 324 2 204 40 0 0 chr20 9258901 9258926 -62894956 + (TG)n Simple_repeat Simple_repeat 1 25 0 3246 164 43 3 chr20 9258937 9259518 -62894364 + MER6A DNA MER2_type 2 605 0 2311 97 3 3 chr20 9259580 9259889 -62893993 + AluSc SINE Alu 1 309 0 2458 110 30 0 chr20 9260548 9260912 -62892970 - THE1C LTR MaLR 0 375 1 251 344 104 8 chr20 9261761 9261886 -62891996 + MIR SINE MIR 19 155 -107 21 36 0 0 chr20 9263476 9263504 -62890378 + AT_rich Low_complexity Low_complexity 1 28 0 486 49 0 0 chr20 9264962 9265023 -62888859 + (TTCTC)n Simple_repeat Simple_repeat 4 64 0 264 122 0 0 chr20 9265037 9265078 -62888804 + (TTCC)n Simple_repeat Simple_repeat 3 43 0 1561 177 17 17 chr20 9265737 9266025 -62887857 + AluJb SINE Alu 4 291 -21 236 118 0 20 chr20 9266084 9266135 -62887747 + (CA)n Simple_repeat Simple_repeat 2 51 0 355 224 49 14 chr20 9266242 9266385 -62887497 + (TTATA)n Simple_repeat Simple_repeat 5 152 0 181 286 0 0 chr20 9269099 9269141 -62884741 - L2 LINE L2 -7 3265 3224 213 291 73 27 chr20 9270379 9270489 -62883393 - MIR3 SINE MIR -19 189 75 502 321 57 25 chr20 9272709 9272868 -62881014 - MER91A DNA MER1_type -32 164 1 262 219 73 89 chr20 9275021 9275069 -62878813 + MIR SINE MIR 22 69 -193 1118 206 99 19 chr20 9275069 9275355 -62878527 - AluJo SINE Alu 0 307 1 262 219 73 89 chr20 9275355 9275428 -62878454 + MIR SINE MIR 69 142 -120 1733 165 4 4 chr20 9275503 9275776 -62878106 + AluSx SINE Alu 1 273 -39 21 0 0 0 chr20 9276170 9276191 -62877691 + AT_rich Low_complexity Low_complexity 1 21 0 5977 6 0 0 chr20 9276197 9276863 -62877019 + L1PA2 LINE L1 5490 6155 0 189 0 0 0 chr20 9276868 9276889 -62876993 + (TAAAA)n Simple_repeat Simple_repeat 2 22 0 43123 28 23 1 chr20 9279339 9285357 -62868525 + L1HS LINE L1 2 6155 0 243 0 0 0 chr20 9285370 9285397 -62868485 + (A)n Simple_repeat Simple_repeat 1 27 0 413 256 95 70 chr20 9286355 9286597 -62867285 - L1ME3A LINE L1 -9 6161 5914 381 298 224 0 chr20 9286835 9287040 -62866842 - MIR SINE MIR 0 262 12 188 220 80 20 chr20 9287134 9287184 -62866698 + L3 LINE CR1 1431 1483 -94 738 160 29 130 chr20 9287378 9287616 -62866266 + MER20 DNA MER1_type 6 219 0 362 250 162 27 chr20 9288146 9288294 -62865588 - MER5A DNA MER1_type 0 189 22 2178 116 0 0 chr20 9290420 9290713 -62863169 - AluSq SINE Alu -20 293 1 1068 238 33 119 chr20 9290984 9291564 -62862318 - L1MC4 LINE L1 -26 8016 7487 25 65 0 0 chr20 9291665 9291711 -62862171 + AT_rich Low_complexity Low_complexity 1 46 0 2476 70 0 0 chr20 9291803 9292102 -62861780 - AluY SINE Alu -12 299 1 21 0 0 0 chr20 9292501 9292522 -62861360 + AT_rich Low_complexity Low_complexity 1 21 0 287 322 68 17 chr20 9292973 9293091 -62860791 - L2 LINE L2 0 3313 3190 295 269 81 62 chr20 9293414 9293574 -62860308 - MIR SINE MIR -74 188 26 771 253 55 46 chr20 9293771 9294101 -62859781 - L1ME2 LINE L1 -5 6161 5832 1438 229 11 4 chr20 9294114 9294393 -62859489 - MLT1A1 LTR MaLR 0 365 85 435 207 24 0 chr20 9294440 9294522 -62859360 - MLT1A1 LTR MaLR -285 89 6 924 222 77 42 chr20 9294525 9294836 -62859046 - L1ME2 LINE L1 -323 5841 5520 209 233 0 0 chr20 9294836 9294879 -62859003 + (TA)n Simple_repeat Simple_repeat 2 44 0 315 311 0 0 chr20 9294879 9294969 -62858913 + L1MC4 LINE L1 6614 6703 -1339 216 0 0 0 chr20 9294978 9295002 -62858880 + (TA)n Simple_repeat Simple_repeat 1 24 0 2214 136 3 6 chr20 9295015 9295369 -62858513 + L1PB1 LINE L1 5791 6143 -8 23 0 0 0 chr20 9295369 9295392 -62858490 + AT_rich Low_complexity Low_complexity 1 23 0 2177 92 0 52 chr20 9295484 9295811 -62858071 - AluY SINE Alu -1 310 1 423 0 0 0 chr20 9296179 9296226 -62857656 + (TG)n Simple_repeat Simple_repeat 2 48 0 30 93 0 0 chr20 9296666 9296752 -62857130 + AT_rich Low_complexity Low_complexity 1 86 0 248 274 216 20 chr20 9296999 9297152 -62856730 - LTR41 LTR ERVL -7 766 584 503 199 62 43 chr20 9297714 9297875 -62856007 - LTR41 LTR ERVL -609 164 1 4036 114 14 3 chr20 9298105 9298738 -62855144 - L1MA1 LINE L1 0 6302 5663 1687 79 31 0 chr20 9298777 9299005 -62854877 - L1M1 LINE L1 -554 7167 6933 1122 119 0 43 chr20 9299017 9299202 -62854680 - AluSc SINE Alu -1 308 132 13846 186 40 14 chr20 9299206 9305374 -62848508 - L1M1 LINE L1 -752 6813 515 2378 78 7 3 chr20 9305374 9305681 -62848201 + AluSc SINE Alu 1 308 -1 13846 186 40 14 chr20 9305681 9306107 -62847775 - L1M1 LINE L1 -7050 515 102 2464 291 30 39 chr20 9306132 9306995 -62846887 - HERVL LTR ERVL -648 5116 4262 4005 181 39 6 chr20 9306995 9307896 -62845986 + L1PB4 LINE L1 5131 6065 -91 650 236 55 12 chr20 9307962 9308127 -62845755 - HERVL LTR ERVL -1497 4267 4096 955 153 101 5 chr20 9308149 9308358 -62845524 - L1MA9 LINE L1 0 6312 6084 1027 246 11 19 chr20 9308371 9308639 -62845243 - HERVL LTR ERVL -1657 3997 3732 330 350 32 6 chr20 9308994 9309151 -62844731 - HERVL LTR ERVL -4983 671 511 198 0 0 0 chr20 9309397 9309419 -62844463 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 1448 232 69 43 chr20 9309709 9310170 -62843712 + MLT1D LTR MaLR 31 503 -2 618 220 19 31 chr20 9310890 9311049 -62842833 - LTR41 LTR ERVL -609 164 8 1138 297 24 29 chr20 9311067 9311559 -62842323 - L1MC4 LINE L1 -303 7739 7250 484 202 18 30 chr20 9311559 9311727 -62842155 + CT-rich Low_complexity Low_complexity 1 166 0 301 260 62 0 chr20 9311733 9311829 -62842053 - L1MC4 LINE L1 -937 7105 7004 3797 197 40 16 chr20 9311838 9312705 -62841177 - L1MB5 LINE L1 0 6672 5785 935 209 5 0 chr20 9312714 9312924 -62840958 - L1MB5 LINE L1 -1093 5551 5341 1806 262 21 7 chr20 9312929 9313509 -62840373 - L1MB5 LINE L1 -1616 5028 4441 888 324 81 40 chr20 9313484 9314185 -62839697 - L1MB5 LINE L1 -5736 806 77 * 269 342 37 104 chr20 9314501 9314884 -62838998 - L2 LINE L2 -2 3270 2914 473 246 14 5 chr20 9315201 9315430 -62838452 + GA-rich Low_complexity Low_complexity 1 231 0 201 392 0 25 chr20 9315348 9315468 -62838414 + G-rich Low_complexity Low_complexity 5 121 0 * 519 168 26 26 chr20 9315472 9315627 -62838255 + GA-rich Low_complexity Low_complexity 4 158 0 25 0 0 0 chr20 9316369 9316394 -62837488 + AT_rich Low_complexity Low_complexity 1 25 0 2141 156 60 26 chr20 9316629 9317097 -62836785 + L1MB3 LINE L1 5697 6180 -3 25 75 0 0 chr20 9318395 9318448 -62835434 + AT_rich Low_complexity Low_complexity 1 53 0 254 291 17 109 chr20 9318611 9318698 -62835184 + MIR3 SINE MIR 7 72 -136 470 299 44 29 chr20 9318698 9318902 -62834980 + MER63A DNA MER1_type 1 207 -3 254 291 17 109 chr20 9318902 9318989 -62834893 + MIR3 SINE MIR 72 165 -43 426 297 61 12 chr20 9321008 9321173 -62832709 + MIR SINE MIR 29 201 -61 988 246 80 42 chr20 9322036 9322397 -62831485 - LTR16A1 LTR ERVL 0 457 83 360 270 35 40 chr20 9322743 9322917 -62830965 + MER46C DNA MER2_type 82 254 -84 22 0 0 0 chr20 9322952 9322974 -62830908 + AT_rich Low_complexity Low_complexity 1 22 0 304 352 125 36 chr20 9323157 9323461 -62830421 - L3 LINE CR1 -65 1512 1182 332 304 54 0 chr20 9323919 9324011 -62829871 + L2 LINE L2 3190 3286 -27 22 0 0 0 chr20 9324811 9324833 -62829049 + AT_rich Low_complexity Low_complexity 1 22 0 26 74 0 0 chr20 9325830 9325884 -62827998 + AT_rich Low_complexity Low_complexity 1 54 0 229 346 90 26 chr20 9325903 9326059 -62827823 + MIR3 SINE MIR 40 205 -3 237 65 0 0 chr20 9326189 9326220 -62827662 + (CA)n Simple_repeat Simple_repeat 2 32 0 691 274 29 19 chr20 9326283 9326467 -62827415 - MER63A DNA MER1_type -1478 210 22 2614 176 43 43 chr20 9326467 9327029 -62826853 + MER68 LTR ERV1 1 562 0 691 274 29 19 chr20 9327029 9327052 -62826830 - MER63A DNA MER1_type -1666 22 1 192 40 0 0 chr20 9327171 9327196 -62826686 + (TG)n Simple_repeat Simple_repeat 2 26 0 21 36 0 0 chr20 9327360 9327388 -62826494 + AT_rich Low_complexity Low_complexity 1 28 0 2144 118 36 36 chr20 9327444 9327808 -62826074 - THE1B LTR MaLR 0 364 1 9704 106 93 1 chr20 9327808 9329252 -62824630 - THE1B-int LTR MaLR 0 1580 3 2129 137 42 25 chr20 9329254 9329612 -62824270 - THE1B LTR MaLR 0 364 1 369 215 0 0 chr20 9330644 9330737 -62823145 + (TA)n Simple_repeat Simple_repeat 2 94 0 249 327 95 39 chr20 9331324 9331660 -62822222 + L2 LINE L2 550 904 -2410 1264 197 39 55 chr20 9331728 9332037 -62821845 - AluJo SINE Alu -8 304 1 1753 204 33 3 chr20 9332580 9332948 -62820934 - L1MB5 LINE L1 -8 6166 5788 291 157 0 0 chr20 9332956 9333007 -62820875 + (TA)n Simple_repeat Simple_repeat 1 51 0 1899 109 29 7 chr20 9333021 9333296 -62820586 + THE1B LTR MaLR 84 364 0 656 251 5 44 chr20 9333324 9333527 -62820355 - L1M4 LINE L1 -5506 1036 842 807 33 17 25 chr20 9333545 9333665 -62820217 + (TTTC)n Simple_repeat Simple_repeat 2 120 0 406 125 0 0 chr20 9333665 9333721 -62820161 - AluJo SINE Alu -32 280 225 * 795 216 0 6 chr20 9333719 9333881 -62820001 - AluJo SINE Alu -151 161 1 492 279 0 0 chr20 9333897 9334019 -62819863 - L1M4 LINE L1 -5788 754 633 1696 216 8 8 chr20 9334700 9335065 -62818817 + MLT1A1 LTR MaLR 1 365 0 2380 32 0 0 chr20 9336713 9336995 -62816887 + L1PA4 LINE L1 5864 6145 -10 271 267 112 9 chr20 9337151 9337267 -62816615 + MER5C DNA MER1_type 4 131 -193 1403 204 7 25 chr20 9337454 9337734 -62816148 + L1MDa LINE L1 15 289 -6251 337 253 0 0 chr20 9337719 9337794 -62816088 + L1M4 LINE L1 3508 3582 -2564 * 386 276 29 12 chr20 9337791 9337961 -62815921 + L1M4 LINE L1 4339 4511 -1635 619 341 101 31 chr20 9339344 9339799 -62814083 + LTR16C LTR ERVL 5 491 0 562 319 173 35 chr20 9339802 9340178 -62813704 + MLT1K LTR MaLR 157 584 -4 262 273 162 32 chr20 9341741 9341895 -62811987 - MLT1H LTR MaLR -4 545 372 377 299 138 24 chr20 9342253 9342420 -62811462 + MER63A DNA MER1_type 22 207 -3 24 32 0 0 chr20 9343642 9343673 -62810209 + AT_rich Low_complexity Low_complexity 1 31 0 1050 213 29 42 chr20 9343824 9344063 -62809819 + AluJb SINE Alu 65 300 -12 2245 116 0 0 chr20 9345720 9346030 -62807852 + AluSg SINE Alu 1 310 0 1846 144 0 21 chr20 9346210 9346579 -62807303 - AluSx SINE Alu 0 367 5 467 143 12 12 chr20 9346737 9346821 -62807061 - AluJ/FLAM SINE Alu -226 86 3 968 117 0 21 chr20 9346913 9347058 -62806824 + AluSg/x SINE Alu 154 295 -15 26 74 0 0 chr20 9347742 9347796 -62806086 + AT_rich Low_complexity Low_complexity 1 54 0 225 339 68 8 chr20 9348041 9348159 -62805723 - L2 LINE L2 -12 3260 3136 3294 138 15 4 chr20 9348191 9348740 -62805142 - L1MB1 LINE L1 -1 6167 5613 1649 169 36 36 chr20 9350140 9350442 -62803440 + AluJo SINE Alu 6 307 -5 21 57 0 0 chr20 9351875 9351910 -62801972 + AT_rich Low_complexity Low_complexity 1 35 0 181 189 11 44 chr20 9351978 9352068 -62801814 + (TA)n Simple_repeat Simple_repeat 2 88 0 742 210 55 110 chr20 9353511 9353645 -62800237 + MER5A DNA MER1_type 1 122 -67 1678 98 140 11 chr20 9353645 9353910 -62799972 - AluSg SINE Alu -1 299 1 742 210 55 110 chr20 9353910 9353975 -62799907 + MER5A DNA MER1_type 122 189 0 261 308 83 19 chr20 9354807 9354963 -62798919 + MIR SINE MIR 97 262 0 228 159 95 0 chr20 9354978 9355041 -62798841 + L1MC4 LINE L1 6624 6692 -1350 192 40 0 0 chr20 9355044 9355069 -62798813 + (GA)n Simple_repeat Simple_repeat 2 26 0 1345 224 22 32 chr20 9355078 9355390 -62798492 - MLT2D LTR ERVL -105 309 1 361 292 10 10 chr20 9356057 9356153 -62797729 + MER5A DNA MER1_type 1 96 -93 2832 221 70 44 chr20 9356204 9357151 -62796731 + L1MDa LINE L1 998 1974 -4566 2250 107 3 0 chr20 9357151 9357450 -62796432 - AluSx SINE Alu -12 300 1 2832 221 70 44 chr20 9357450 9357496 -62796386 + L1MDa LINE L1 1974 2017 -4523 372 306 100 0 chr20 9357515 9357675 -62796207 + MLT1J1 LTR MaLR 9 184 -262 291 279 82 93 chr20 9357717 9357900 -62795982 + MLT1J2 LTR MaLR 263 443 -7 180 111 0 0 chr20 9358682 9358709 -62795173 + (GA)n Simple_repeat Simple_repeat 2 28 0 1477 198 128 22 chr20 9359896 9360254 -62793628 + MSTD LTR MaLR 1 396 0 207 100 0 0 chr20 9360728 9360758 -62793124 + (TAA)n Simple_repeat Simple_repeat 3 32 0 297 314 109 7 chr20 9360767 9360904 -62792978 - MIR SINE MIR -17 245 95 249 308 23 85 chr20 9360969 9361030 -62792852 - L2 LINE L2 0 3272 3222 1198 188 109 10 chr20 9361030 9361323 -62792559 - MER33 DNA MER1_type -2 322 1 249 308 23 85 chr20 9361323 9361391 -62792491 - L2 LINE L2 -50 3222 3151 * 1033 292 62 22 chr20 9361382 9361783 -62792099 - L2 LINE L2 -367 2947 2531 827 247 25 81 chr20 9361897 9362290 -62791592 + LTR37B LTR ERV1 98 468 0 290 231 93 19 chr20 9363381 9363489 -62790393 - MLT1H LTR MaLR -15 534 419 2586 46 0 3 chr20 9363701 9364005 -62789877 + AluY SINE Alu 1 303 -8 21 0 0 0 chr20 9364033 9364054 -62789828 + AT_rich Low_complexity Low_complexity 1 21 0 230 209 0 0 chr20 9364075 9364118 -62789764 - MLT1H LTR MaLR -387 162 120 839 194 57 110 chr20 9364801 9365064 -62788818 + AluJo SINE Alu 30 278 -34 463 185 19 9 chr20 9365081 9365189 -62788693 - L1MB7 LINE L1 -27 6157 6049 * 6196 164 30 5 chr20 9365188 9365873 -62788009 + L1M1 LINE L1 10 731 -6834 186 43 0 0 chr20 9365873 9365896 -62787986 + (GGAGA)n Simple_repeat Simple_repeat 4 26 0 6196 164 30 5 chr20 9365896 9366237 -62787645 + L1M1 LINE L1 731 1062 -6503 535 242 181 74 chr20 9366941 9367310 -62786572 + L2 LINE L2 2622 3030 -283 182 292 180 11 chr20 9367803 9367892 -62785990 + MIR3 SINE MIR 2 105 -103 642 113 0 10 chr20 9367973 9368099 -62785783 + FLAM_A SINE Alu 19 143 0 4823 254 63 47 chr20 9368246 9370070 -62783812 - L1M4c LINE L1 -4602 2355 560 1786 105 0 8 chr20 9370070 9370318 -62783564 + AluSg SINE Alu 32 277 -33 186 43 0 0 chr20 9370323 9370346 -62783536 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4823 254 63 47 chr20 9370346 9370848 -62783034 - L1M4c LINE L1 -6400 557 11 226 325 72 0 chr20 9371133 9371216 -62782666 - MIR SINE MIR -171 91 3 287 339 62 0 chr20 9371305 9371435 -62782447 + MIR SINE MIR 91 228 -34 473 268 203 7 chr20 9371896 9372049 -62781833 + MER5A DNA MER1_type 3 185 -4 254 350 38 42 chr20 9372316 9372553 -62781329 + L2 LINE L2 2877 3112 -160 733 184 13 0 chr20 9372556 9372790 -62781092 + CT-rich Low_complexity Low_complexity 1 237 0 293 346 0 0 chr20 9372850 9372928 -62780954 + L2 LINE L2 3133 3210 -62 517 252 9 0 chr20 9373061 9373172 -62780710 - L2 LINE L2 -12 3301 3190 31 82 0 0 chr20 9373451 9373524 -62780358 + AT_rich Low_complexity Low_complexity 1 73 0 6287 171 26 27 chr20 9373621 9373657 -62780225 - L1MA4A LINE L1 -6 6999 6964 2292 120 50 36 chr20 9373657 9374016 -62779866 + THE1B LTR MaLR 1 364 0 6287 171 26 27 chr20 9374016 9374375 -62779507 - L1MA4A LINE L1 -41 6964 6606 1717 167 0 14 chr20 9374375 9374663 -62779219 + AluSx SINE Alu 1 284 -28 216 0 0 0 chr20 9374666 9374690 -62779192 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 6287 171 26 27 chr20 9374690 9376702 -62777180 - L1MA4A LINE L1 -401 6604 4582 5547 219 52 12 chr20 9376704 9377991 -62775891 - L1MA4A LINE L1 -4724 2125 787 1534 201 7 14 chr20 9378527 9378816 -62775066 - AluJb SINE Alu -25 287 1 219 188 0 0 chr20 9378991 9379091 -62774791 + GA-rich Low_complexity Low_complexity 1 100 0 29 28 0 0 chr20 9379182 9379218 -62774664 + AT_rich Low_complexity Low_complexity 1 36 0 21 82 0 0 chr20 9379624 9379673 -62774209 + AT_rich Low_complexity Low_complexity 1 49 0 223 122 41 0 chr20 9380084 9380133 -62773749 + (TTAAA)n Simple_repeat Simple_repeat 2 52 0 1622 175 0 14 chr20 9380788 9381079 -62772803 - AluJb SINE Alu -25 287 1 621 289 83 14 chr20 9381659 9381877 -62772005 + MIR SINE MIR 4 236 -26 685 258 46 116 chr20 9383350 9383695 -62770187 + MLT1G LTR MaLR 2 322 -273 338 265 20 10 chr20 9383803 9383901 -62769981 + MLT1G LTR MaLR 444 542 -13 3385 226 71 29 chr20 9384154 9385025 -62768857 + L1M4 LINE L1 14 921 -5621 24 53 0 0 chr20 9385207 9385245 -62768637 + AT_rich Low_complexity Low_complexity 1 38 0 318 258 21 11 chr20 9385471 9385564 -62768318 - L1M4 LINE L1 -3600 2546 2453 180 0 0 0 chr20 9385701 9385721 -62768161 + (TTG)n Simple_repeat Simple_repeat 2 21 0 21 36 0 0 chr20 9385891 9385919 -62767963 + AT_rich Low_complexity Low_complexity 1 28 0 424 159 45 144 chr20 9386171 9386303 -62767579 + L1M4 LINE L1 587 705 -5837 326 244 24 0 chr20 9387582 9387664 -62766218 + MER81 DNA DNA 31 114 0 1200 66 28 44 chr20 9387740 9387921 -62765961 + L1PA11 LINE L1 5996 6173 -1 1496 330 33 22 chr20 9387933 9388536 -62765346 + ERVL LTR ERVL 3135 3744 -2020 558 333 40 35 chr20 9388596 9389001 -62764881 + ERVL LTR ERVL 4788 5194 -570 1188 58 17 6 chr20 9390342 9390516 -62763366 + (TTTC)n Simple_repeat Simple_repeat 1 176 0 1928 157 7 0 chr20 9390521 9390827 -62763055 - AluSx SINE Alu -4 308 1 492 188 45 0 chr20 9391016 9391128 -62762754 - L1MA8 LINE L1 -5 6286 6170 21 0 0 0 chr20 9391159 9391180 -62762702 + AT_rich Low_complexity Low_complexity 1 21 0 537 239 54 129 chr20 9392178 9392550 -62761332 - MLT1H LTR MaLR -165 384 41 1524 187 22 4 chr20 9393604 9393882 -62760000 - AluJo SINE Alu -29 283 1 1078 201 62 0 chr20 9393902 9394111 -62759771 + AluJo SINE Alu 79 300 -12 2181 120 3 0 chr20 9394427 9394727 -62759155 - AluSx SINE Alu -11 301 1 1540 249 60 40 chr20 9394727 9395477 -62758405 - L1M4 LINE L1 -2293 3853 3089 308 296 75 14 chr20 9395749 9396024 -62757858 - MER20B DNA MER1_type -432 351 1 776 213 58 16 chr20 9396032 9396220 -62757662 + MER3 DNA MER1_type 1 196 -13 577 333 162 19 chr20 9396430 9396899 -62756983 - L3 LINE CR1 -698 879 344 410 311 22 15 chr20 9396904 9397039 -62756843 - MIR SINE MIR -102 160 25 260 173 113 196 chr20 9397046 9397179 -62756703 + MLT1E LTR MaLR 1 122 -471 2103 111 7 3 chr20 9397515 9397803 -62756079 - AluSx SINE Alu -23 289 1 403 300 111 12 chr20 9397960 9398213 -62755669 + L1ME4a LINE L1 5558 5835 -286 200 167 45 30 chr20 9398236 9398302 -62755580 + (CATATA)n Simple_repeat Simple_repeat 5 71 0 21 0 0 0 chr20 9398455 9398476 -62755406 + AT_rich Low_complexity Low_complexity 1 21 0 2069 133 0 10 chr20 9399037 9399339 -62754543 - AluSc SINE Alu -10 299 1 246 226 19 0 chr20 9399812 9399865 -62754017 + GA-rich Low_complexity Low_complexity 2 55 0 568 297 53 19 chr20 9401499 9401708 -62752174 - MIR SINE MIR 0 262 47 320 60 75 0 chr20 9401817 9401884 -62751998 + (TAGA)n Simple_repeat Simple_repeat 2 73 0 284 280 5 0 chr20 9403883 9403973 -62749909 + MIR SINE MIR 98 187 -62 291 268 0 61 chr20 9404906 9404988 -62748894 - L2 LINE L2 0 3313 3237 2203 98 0 32 chr20 9405368 9405684 -62748198 - AluSg SINE Alu -4 306 1 297 155 0 0 chr20 9408451 9408509 -62745373 + A-rich Low_complexity Low_complexity 3 60 0 393 22 0 0 chr20 9409147 9409193 -62744689 + (CA)n Simple_repeat Simple_repeat 1 46 0 210 348 22 0 chr20 9410622 9410714 -62743168 + CT-rich Low_complexity Low_complexity 2 95 0 1079 218 84 14 chr20 9410905 9411189 -62742693 + MER2 DNA MER2_type 41 344 -1 873 271 166 56 chr20 9411274 9411810 -62742072 + MLT1H1 LTR MaLR 1 555 0 23 0 0 0 chr20 9411894 9411917 -62741965 + AT_rich Low_complexity Low_complexity 1 23 0 1045 179 0 0 chr20 9411997 9412170 -62741712 - FRAM SINE Alu 0 176 4 7471 31 2 0 chr20 9412514 9413856 -62740026 - L1PA4 LINE L1 -1 6154 4808 185 0 40 0 chr20 9414040 9414065 -62739817 + (TA)n Simple_repeat Simple_repeat 1 26 0 2156 108 0 10 chr20 9414067 9414391 -62739491 - AluSc SINE Alu 0 321 1 392 245 82 0 chr20 9416317 9416415 -62737467 - MER5A DNA MER1_type -80 109 4 526 159 58 43 chr20 9416496 9416634 -62737248 + MER53 DNA DNA 50 189 0 375 287 57 8 chr20 9416651 9416773 -62737109 - MER5B DNA MER1_type -50 128 1 207 275 211 37 chr20 9416785 9416894 -62736988 - MIR SINE MIR -61 147 20 738 193 14 21 chr20 9417131 9417271 -62736611 - MER5B DNA MER1_type -39 139 1 24 53 0 0 chr20 9417585 9417623 -62736259 + AT_rich Low_complexity Low_complexity 1 38 0 517 178 5 140 chr20 9418947 9419132 -62734750 + MER53 DNA DNA 3 157 -32 1121 195 30 128 chr20 9419132 9419537 -62734345 - MLT1A1 LTR MaLR 0 365 1 517 178 5 140 chr20 9419537 9419565 -62734317 + MER53 DNA DNA 157 187 -2 2896 144 43 14 chr20 9420088 9420649 -62733233 - L1MA4 LINE L1 -1 6299 5723 229 296 12 0 chr20 9421673 9421754 -62732128 + (TA)n Simple_repeat Simple_repeat 1 82 0 180 0 0 0 chr20 9424594 9424614 -62729268 + (TTG)n Simple_repeat Simple_repeat 2 21 0 525 279 23 17 chr20 9424938 9425110 -62728772 - MER69 DNA AcHobo -1053 173 1 2323 109 0 0 chr20 9425143 9425445 -62728437 - AluSg SINE Alu -8 302 1 479 157 39 10 chr20 9426288 9426390 -62727492 - L1MC1 LINE L1 -5 6328 6224 237 139 0 0 chr20 9427037 9427080 -62726802 + (TG)n Simple_repeat Simple_repeat 2 44 0 8256 51 0 2 chr20 9427930 9429741 -62724141 + L1PA5 LINE L1 4343 6151 -3 499 353 134 35 chr20 9429878 9430595 -62723287 - L2 LINE L2 -337 2977 2190 322 250 28 94 chr20 9431427 9431607 -62722275 + L2 LINE L2 3146 3313 0 1917 145 10 3 chr20 9432171 9432467 -62721415 - AluSx SINE Alu -14 298 1 1219 175 47 132 chr20 9433086 9433550 -62720332 - L1MB8 LINE L1 -1 6177 5753 288 338 25 55 chr20 9434415 9434616 -62719266 + L2 LINE L2 2888 3082 -190 719 230 67 11 chr20 9434889 9435067 -62718815 + MER5A DNA MER1_type 1 188 -1 652 185 8 23 chr20 9435163 9435293 -62718589 - L1MC4a LINE L1 -1052 6756 6629 258 32 0 0 chr20 9435300 9435331 -62718551 + (TG)n Simple_repeat Simple_repeat 1 31 0 1252 179 60 13 chr20 9435403 9435637 -62718245 - AluJb SINE Alu -67 245 1 747 231 29 29 chr20 9435642 9435850 -62718032 - L1MC3 LINE L1 -1260 6525 6318 343 240 20 113 chr20 9437079 9437229 -62716653 - MER5A DNA MER1_type -18 171 36 234 128 0 0 chr20 9438378 9438417 -62715465 + (TG)n Simple_repeat Simple_repeat 2 40 0 596 210 123 65 chr20 9439077 9439286 -62714596 - MIR SINE MIR 0 262 40 285 98 0 0 chr20 9439381 9439422 -62714460 + (TCTA)n Simple_repeat Simple_repeat 3 43 0 471 87 0 0 chr20 9439423 9439492 -62714390 + (TCCC)n Simple_repeat Simple_repeat 4 72 0 186 43 0 0 chr20 9439498 9439521 -62714361 + (CCTA)n Simple_repeat Simple_repeat 1 23 0 10853 165 59 87 chr20 9439523 9442330 -62711552 - Tigger4(Zombi) DNA MER2_type -2 2729 2 1866 167 24 12 chr20 9442417 9442746 -62711136 - MER1B DNA MER1_type 0 339 7 819 158 5 49 chr20 9442782 9442966 -62710916 + L1MA5A LINE L1 6120 6295 -2 946 187 130 23 chr20 9443495 9443771 -62710111 - MER33 DNA MER1_type -25 299 1 200 225 0 0 chr20 9444504 9444544 -62709338 + CT-rich Low_complexity Low_complexity 2 41 0 1927 202 11 0 chr20 9444813 9445174 -62708708 + MLT1A1 LTR MaLR 1 365 0 2815 3 0 0 chr20 9445290 9445594 -62708288 - AluYa5 SINE Alu -7 304 1 320 236 47 123 chr20 9445624 9445836 -62708046 - L1MC4 LINE L1 -11 8031 7836 398 206 328 0 chr20 9445901 9446032 -62707850 - L1ME2 LINE L1 -75 6089 5916 6293 79 14 2 chr20 9447566 9448964 -62704918 - L1PA10 LINE L1 -5 6163 4770 6847 215 53 24 chr20 9449338 9450672 -62703210 - L1MB3 LINE L1 -7 6176 4882 5436 11 0 0 chr20 9450672 9451285 -62702597 - L1PA2 LINE L1 0 6155 5543 6847 215 53 24 chr20 9451285 9452771 -62701111 - L1MB3 LINE L1 -1301 4882 3273 505 192 113 7 chr20 9454959 9455110 -62698772 + MER53 DNA DNA 19 185 -4 202 291 36 82 chr20 9455116 9455226 -62698656 - MER5B DNA MER1_type -72 106 2 189 214 0 0 chr20 9455249 9455291 -62698591 + (CA)n Simple_repeat Simple_repeat 2 43 0 208 302 188 0 chr20 9455703 9455799 -62698083 - L2 LINE L2 -1 3312 3199 210 118 0 0 chr20 9455924 9455958 -62697924 + (A)n Simple_repeat Simple_repeat 1 34 0 558 234 185 17 chr20 9457052 9457282 -62696600 - MIR SINE MIR 0 262 16 775 235 34 0 chr20 9458160 9458339 -62695543 - MER5A DNA MER1_type -4 185 1 3267 166 75 19 chr20 9458729 9459397 -62694485 + MER44D DNA MER2_type 1 705 0 23 0 0 0 chr20 9459574 9459597 -62694285 + AT_rich Low_complexity Low_complexity 1 23 0 1759 191 29 9 chr20 9459716 9460056 -62693826 + MER7A DNA MER2_type 2 346 0 35 63 0 0 chr20 9460107 9460170 -62693712 + AT_rich Low_complexity Low_complexity 1 63 0 1279 201 44 91 chr20 9460817 9461226 -62692656 - MLT1B LTR MaLR 0 390 1 306 357 11 10 chr20 9461364 9461531 -62692351 + MIR SINE MIR 6 174 -63 737 258 128 47 chr20 9461625 9462117 -62691765 - L1MC4a LINE L1 -1644 6164 5633 348 283 26 35 chr20 9462577 9462805 -62691077 + CT-rich Low_complexity Low_complexity 1 225 0 266 307 23 11 chr20 9465023 9465111 -62688771 + MIR3 SINE MIR 109 197 -11 231 248 0 28 chr20 9465582 9465691 -62688191 + (TA)n Simple_repeat Simple_repeat 1 106 0 1564 70 0 0 chr20 9466131 9466331 -62687551 - L1PA8 LINE L1 -425 5706 5507 3114 122 0 0 chr20 9466331 9466795 -62687087 + L1PA8 LINE L1 5705 6172 0 1638 199 27 0 chr20 9467271 9467572 -62686310 + AluJb SINE Alu 1 309 -3 207 0 0 0 chr20 9467922 9467945 -62685937 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 393 252 14 119 chr20 9468484 9468702 -62685180 - L1ME1 LINE L1 -81 6085 5891 * 1154 249 84 12 chr20 9468699 9469117 -62684765 - L1MEc LINE L1 -4273 2123 1676 3081 269 40 26 chr20 9469285 9470457 -62683425 - L1ME1 LINE L1 -1450 4696 3508 340 266 1 2 chr20 9470488 9470601 -62683281 + L1M3 LINE L1 5331 5442 -726 * 16763 109 11 26 chr20 9470590 9472573 -62681309 + L1P3 LINE L1 666 2621 -3840 193 29 59 0 chr20 9472573 9472607 -62681275 + (CAA)n Simple_repeat Simple_repeat 1 36 0 16763 109 11 26 chr20 9472607 9473684 -62680198 + L1P3 LINE L1 2621 3713 -2748 628 133 0 20 chr20 9473684 9473782 -62680100 + AluSg/x SINE Alu 198 293 -16 2911 177 0 18 chr20 9473783 9474342 -62679540 + L1P3 LINE L1 4222 4770 -1691 414 311 8 0 chr20 9474348 9474467 -62679415 - L2 LINE L2 -474 2840 2721 1714 190 5 60 chr20 9474533 9474917 -62678965 - MLT1A1 LTR MaLR -2 363 1 794 297 125 9 chr20 9474994 9475337 -62678545 - MLT1J2 LTR MaLR -64 386 4 244 123 15 31 chr20 9476007 9476072 -62677810 + CT-rich Low_complexity Low_complexity 4 67 0 181 307 23 11 chr20 9476107 9476195 -62677687 + MIR3 SINE MIR 113 201 -7 25 31 0 0 chr20 9476819 9476851 -62677031 + AT_rich Low_complexity Low_complexity 1 32 0 235 337 31 10 chr20 9477413 9477511 -62676371 + L2 LINE L2 2277 2376 -938 207 214 18 0 chr20 9477556 9477612 -62676270 + (CAAA)n Simple_repeat Simple_repeat 4 60 0 631 309 120 34 chr20 9477613 9478165 -62675717 + L2 LINE L2 2446 3060 -212 532 274 54 18 chr20 9478791 9478959 -62674923 - MLT1J1 LTR MaLR -264 182 9 530 125 0 19 chr20 9479147 9479251 -62674631 - L1MA4 LINE L1 -5 6295 6194 298 350 24 0 chr20 9480169 9480292 -62673590 + MIR3 SINE MIR 2 127 -81 333 281 139 50 chr20 9480297 9480535 -62673347 + L1ME LINE L1 5521 5779 -383 1523 293 52 9 chr20 9480719 9481272 -62672610 + L1ME3 LINE L1 5573 6149 -13 199 307 92 79 chr20 9482183 9482411 -62671471 + L3 LINE CR1 486 716 -861 1033 279 81 16 chr20 9482486 9482910 -62670972 - MLT1H LTR MaLR -55 494 1 719 280 5 11 chr20 9482993 9483182 -62670700 + MER63A DNA MER1_type 23 210 0 2072 122 135 23 chr20 9483254 9483639 -62670243 - MSTA LTR MaLR 0 428 1 197 298 18 0 chr20 9484705 9484762 -62669120 - L2 LINE L2 -234 3038 2981 323 333 151 33 chr20 9484894 9485291 -62668591 - L2 LINE L2 -568 2746 2303 1304 119 67 0 chr20 9485291 9485501 -62668381 + MSTB1 LTR MaLR 209 432 0 211 390 12 0 chr20 9486559 9486641 -62667241 - MIR SINE MIR -167 95 13 303 28 0 0 chr20 9486686 9486722 -62667160 + (TG)n Simple_repeat Simple_repeat 2 37 0 38 98 0 0 chr20 9486943 9487065 -62666817 + AT_rich Low_complexity Low_complexity 1 122 0 217 264 19 0 chr20 9488202 9488255 -62665627 - MIR SINE MIR -85 177 124 312 347 0 20 chr20 9488627 9488725 -62665157 + MER91A DNA MER1_type 101 196 0 408 315 51 30 chr20 9488938 9489135 -62664747 - L1ME3 LINE L1 -251 5911 5711 2010 247 77 52 chr20 9489519 9490243 -62663639 + MER21B LTR ERV1 24 765 -98 416 236 14 74 chr20 9490771 9490919 -62662963 - MER21B LTR ERV1 -111 752 614 26 50 0 0 chr20 9491171 9491211 -62662671 + AT_rich Low_complexity Low_complexity 1 40 0 711 182 19 19 chr20 9491522 9491676 -62662206 + MLT1A1 LTR MaLR 10 163 -202 1895 226 3 0 chr20 9491677 9492014 -62661868 + L1MA4A LINE L1 1015 1352 -5497 3267 163 31 8 chr20 9492015 9492621 -62661261 + L1MA4A LINE L1 4179 4798 -2050 339 25 0 0 chr20 9492621 9492661 -62661221 + (TTA)n Simple_repeat Simple_repeat 3 42 0 1538 48 0 0 chr20 9492661 9492850 -62661032 - L1PA4 LINE L1 -18 6137 5949 3895 20 7 0 chr20 9492850 9493299 -62660583 + L1PA4 LINE L1 5445 5896 -259 * 5578 176 38 10 chr20 9493297 9495450 -62658432 + L1MA4A LINE L1 4779 7001 -4 927 214 23 14 chr20 9496240 9496455 -62657427 + MLT1A1 LTR MaLR 147 363 -2 23 33 0 0 chr20 9496549 9496579 -62657303 + AT_rich Low_complexity Low_complexity 1 30 0 682 276 118 0 chr20 9496962 9497165 -62656717 + MIR SINE MIR 33 259 -3 790 29 19 0 chr20 9497211 9497316 -62656566 + (TCTA)n Simple_repeat Simple_repeat 4 110 0 220 324 68 14 chr20 9497554 9497628 -62656254 - L2 LINE L2 -4 3309 3232 * 232 325 74 31 chr20 9497613 9497776 -62656106 + L2 LINE L2 3125 3294 -19 253 281 32 73 chr20 9498201 9498358 -62655524 - MIR SINE MIR -64 144 41 360 0 0 0 chr20 9498518 9498558 -62655324 + (CA)n Simple_repeat Simple_repeat 2 41 0 229 264 19 0 chr20 9499570 9499623 -62654259 + CT-rich Low_complexity Low_complexity 3 56 0 398 284 29 0 chr20 9499624 9499726 -62654156 - L2 LINE L2 -5 3267 3163 1047 348 95 39 chr20 9500098 9501144 -62652738 - L2 LINE L2 -386 2928 1825 265 295 26 0 chr20 9501482 9501560 -62652322 - MLT1H LTR MaLR -16 533 454 613 299 43 29 chr20 9501665 9501946 -62651936 - MLT1H LTR MaLR -260 289 5 241 333 139 55 chr20 9501957 9502763 -62651119 - L2 LINE L2 -2058 1256 383 1460 184 35 21 chr20 9504921 9505204 -62648678 + AluJo SINE Alu 11 297 -15 532 277 143 9 chr20 9505281 9505512 -62648370 - MIR SINE MIR 0 262 1 210 180 20 0 chr20 9505583 9505633 -62648249 + T-rich Low_complexity Low_complexity 3 53 0 206 209 0 0 chr20 9505674 9505717 -62648165 + MIR SINE MIR 37 79 -129 544 320 88 50 chr20 9506857 9507395 -62646487 - L2 LINE L2 -6 3307 2755 602 286 62 0 chr20 9507402 9507580 -62646302 - MER5A DNA MER1_type 0 189 1 259 389 8 8 chr20 9507834 9507965 -62645917 + MLT1K LTR MaLR 353 483 -105 187 346 126 31 chr20 9508908 9509067 -62644815 + L2 LINE L2 3099 3272 0 370 243 178 104 chr20 9510402 9510806 -62643076 - MLT1H LTR MaLR -114 435 2 300 286 79 87 chr20 9512063 9512189 -62641693 - MIR SINE MIR -109 153 29 2168 122 73 12 chr20 9515193 9515536 -62638346 + THE1B LTR MaLR 1 364 0 11375 99 11 0 chr20 9515536 9517098 -62636784 + THE1B-int LTR MaLR 1 1580 0 2054 131 76 17 chr20 9517098 9517442 -62636440 + THE1B LTR MaLR 1 364 0 452 275 113 14 chr20 9517541 9517683 -62636199 - MER5A DNA MER1_type -12 177 22 245 228 16 145 chr20 9517812 9518005 -62635877 - MLT1H LTR MaLR 0 549 382 228 290 160 10 chr20 9518035 9518135 -62635747 - MLT1H LTR MaLR -325 224 110 181 113 0 57 chr20 9518485 9518538 -62635344 + (TTTTA)n Simple_repeat Simple_repeat 3 52 0 790 239 51 10 chr20 9519541 9519738 -62634144 - MER3 DNA MER1_type 0 209 5 242 313 0 0 chr20 9519943 9520010 -62633872 - MIR SINE MIR -19 243 177 321 26 0 0 chr20 9520150 9520188 -62633694 + (TG)n Simple_repeat Simple_repeat 2 39 0 557 224 26 0 chr20 9520983 9521099 -62632783 + MER94 DNA DNA 3 121 -13 30 0 0 0 chr20 9521415 9521445 -62632437 + AT_rich Low_complexity Low_complexity 1 30 0 1947 112 44 4 chr20 9521484 9521826 -62632056 - L1P4 LINE L1 -603 5565 5212 3621 102 11 0 chr20 9521826 9522347 -62631535 + L1PA10 LINE L1 5630 6157 -11 1682 232 93 24 chr20 9522387 9523024 -62630858 + MER20B DNA MER1_type 77 773 -10 585 235 92 7 chr20 9523042 9523195 -62630687 + MER5A DNA MER1_type 1 166 -23 222 37 0 0 chr20 9524125 9524152 -62629730 + (TG)n Simple_repeat Simple_repeat 2 28 0 2005 132 35 0 chr20 9525290 9525579 -62628303 - AluSx SINE Alu -13 299 1 294 296 224 0 chr20 9525617 9525742 -62628140 + MER5A DNA MER1_type 31 183 -6 1862 162 38 12 chr20 9525911 9526250 -62627632 - MER7A DNA MER2_type 0 346 1 1970 157 0 10 chr20 9526422 9526734 -62627148 + AluJo SINE Alu 3 311 -1 2034 280 78 28 chr20 9526827 9527620 -62626262 + L1MEc LINE L1 93 925 -5471 32 57 0 0 chr20 9527622 9527675 -62626207 + AT_rich Low_complexity Low_complexity 1 53 0 204 214 0 0 chr20 9527891 9527933 -62625949 + (CATATA)n Simple_repeat Simple_repeat 5 46 0 323 333 14 7 chr20 9528041 9528179 -62625703 + L2 LINE L2 2915 3053 -219 242 175 0 0 chr20 9528664 9528704 -62625178 - MLT2C1 LTR ERVL -8 389 350 346 211 56 0 chr20 9528752 9528823 -62625059 + MLT2B1 LTR ERVL 57 131 -389 186 43 0 0 chr20 9528882 9528905 -62624977 + (TAGA)n Simple_repeat Simple_repeat 4 26 0 1046 297 105 17 chr20 9528905 9529323 -62624559 - MLT2B1 LTR ERVL -65 455 1 23590 202 28 31 chr20 9529325 9529373 -62624509 - ERVL-B1 LTR ERVL -9 5755 5708 1630 117 47 112 chr20 9529373 9529550 -62624332 + THE1C LTR MaLR 1 188 -187 1559 127 0 0 chr20 9529550 9529771 -62624111 - AluSg/x SINE Alu -7 305 85 1630 117 47 112 chr20 9529771 9529994 -62623888 + THE1C LTR MaLR 188 375 0 23590 202 28 31 chr20 9529994 9531989 -62621893 - ERVL-B1 LTR ERVL -56 5708 3709 1438 225 22 32 chr20 9531989 9532358 -62621524 + MLT1A1 LTR MaLR 1 365 0 23590 202 28 31 chr20 9532358 9532700 -62621182 - ERVL-B1 LTR ERVL -2055 3709 3368 315 0 0 0 chr20 9532700 9532735 -62621147 + (CA)n Simple_repeat Simple_repeat 2 36 0 23590 202 28 31 chr20 9532735 9534186 -62619696 - ERVL-B1 LTR ERVL -2396 3368 1915 2218 190 36 5 chr20 9534186 9534602 -62619280 + MSTB1 LTR MaLR 4 432 0 23590 202 28 31 chr20 9534602 9535187 -62618695 - ERVL-B1 LTR ERVL -3849 1915 1330 3275 117 10 0 chr20 9535187 9535681 -62618201 - L1PA13 LINE L1 0 6163 5665 23590 202 28 31 chr20 9535681 9536281 -62617601 - ERVL-B1 LTR ERVL -4434 1330 744 2631 196 16 2 chr20 9536302 9536880 -62617002 + L1MA4A LINE L1 4102 4687 -1459 3806 137 9 14 chr20 9536880 9537522 -62616360 + L1MA4A LINE L1 5650 6297 -6 24 0 0 0 chr20 9537522 9537546 -62616336 + AT_rich Low_complexity Low_complexity 1 24 0 2244 246 69 13 chr20 9537546 9538172 -62615710 - ERVL-B1 LTR ERVL -5102 662 2 876 260 69 86 chr20 9538209 9538616 -62615266 - MLT2B1 LTR ERVL -120 400 1 265 310 50 20 chr20 9538624 9538724 -62615158 - L2 LINE L2 -36 3236 3134 1193 297 60 10 chr20 9538867 9539251 -62614631 - LTR16C LTR ERVL 0 491 89 216 0 0 0 chr20 9539534 9539558 -62614324 + (T)n Simple_repeat Simple_repeat 1 24 0 222 385 21 0 chr20 9539804 9539900 -62613982 + L2 LINE L2 2868 2965 -349 279 0 0 0 chr20 9539946 9539977 -62613905 + (CA)n Simple_repeat Simple_repeat 2 32 0 242 162 54 0 chr20 9540016 9540090 -62613792 + (TA)n Simple_repeat Simple_repeat 2 79 0 1814 146 34 7 chr20 9540434 9540729 -62613153 + AluJb SINE Alu 1 303 -9 207 288 85 0 chr20 9542896 9542955 -62610927 - L2 LINE L2 -17 3255 3192 183 205 0 0 chr20 9544828 9544867 -62609015 + (TG)n Simple_repeat Simple_repeat 2 40 0 1065 266 46 30 chr20 9545307 9545611 -62608271 - LTR16C LTR ERVL -1 490 182 2205 234 58 26 chr20 9546016 9546660 -62607222 - L1MC4 LINE L1 -141 7901 7238 612 250 23 0 chr20 9546674 9546850 -62607032 - L1MC4 LINE L1 -960 7082 6903 183 374 147 10 chr20 9546904 9547102 -62606780 + L3b LINE CR1 1277 1501 -82 1800 189 9 18 chr20 9549028 9549371 -62604511 + MLT1A1 LTR MaLR 26 365 0 540 294 89 97 chr20 9549373 9549835 -62604047 - MLT1H LTR MaLR -84 465 8 221 73 0 24 chr20 9550022 9550063 -62603819 + (TAAAA)n Simple_repeat Simple_repeat 1 40 0 807 254 16 0 chr20 9550226 9550419 -62603463 + MIR SINE MIR 58 253 -9 315 266 61 48 chr20 9551247 9551489 -62602393 - MLT1L LTR MaLR -197 418 110 383 327 75 64 chr20 9552520 9552878 -62601004 - L1ME LINE L1 -379 5742 5381 288 237 88 0 chr20 9552918 9553032 -62600850 - HAL1b LINE L1 -17 1331 1208 232 225 0 0 chr20 9553035 9553075 -62600807 + polypyrimidine Low_complexity Low_complexity 5 44 0 648 287 68 54 chr20 9553652 9554094 -62599788 + LTR16A1 LTR ERVL 8 455 -2 3111 30 0 0 chr20 9554642 9555008 -62598874 - L1PA3 LINE L1 -3 6152 5787 23 33 0 0 chr20 9555150 9555180 -62598702 + AT_rich Low_complexity Low_complexity 1 30 0 568 289 115 31 chr20 9555225 9555485 -62598397 + LTR33 LTR ERVL 4 285 -236 242 109 87 0 chr20 9555508 9555554 -62598328 + MLT1H LTR MaLR 132 181 -368 205 226 19 0 chr20 9555917 9555970 -62597912 + (TA)n Simple_repeat Simple_repeat 2 55 0 651 162 0 0 chr20 9555992 9556091 -62597791 - FLAM_C SINE Alu -29 114 16 409 234 72 72 chr20 9556147 9556314 -62597568 - MER58C DNA MER1_type -5 210 44 225 0 0 0 chr20 9556399 9556424 -62597458 + (A)n Simple_repeat Simple_repeat 1 25 0 1031 248 11 29 chr20 9556488 9556762 -62597120 - L1M4 LINE L1 -5880 662 394 249 327 75 0 chr20 9556899 9557006 -62596876 + L2 LINE L2 2942 3056 -257 292 266 124 54 chr20 9557077 9557408 -62596474 - HAL1 LINE L1 0 2507 2154 33 25 0 0 chr20 9557444 9557484 -62596398 + AT_rich Low_complexity Low_complexity 1 40 0 192 77 0 0 chr20 9557587 9557613 -62596269 + (T)n Simple_repeat Simple_repeat 1 26 0 835 280 75 52 chr20 9557615 9558079 -62595803 - HAL1 LINE L1 -605 1902 1428 25 31 0 0 chr20 9558122 9558154 -62595728 + AT_rich Low_complexity Low_complexity 1 32 0 418 259 74 27 chr20 9558237 9558620 -62595262 + MLT1H LTR MaLR 1 509 -33 26 0 0 0 chr20 9559408 9559434 -62594448 + AT_rich Low_complexity Low_complexity 1 26 0 2050 112 6 37 chr20 9559581 9559904 -62593978 + AluSq SINE Alu 1 313 0 22 0 0 0 chr20 9561323 9561345 -62592537 + AT_rich Low_complexity Low_complexity 1 22 0 1791 173 134 11 chr20 9562708 9563089 -62590793 + MSTA LTR MaLR 1 428 0 183 42 0 0 chr20 9563258 9563282 -62590600 + (TTTTTA)n Simple_repeat Simple_repeat 1 24 0 5188 193 22 16 chr20 9563289 9565017 -62588865 - L1PA16 LINE L1 -10 6156 4413 405 0 0 0 chr20 9565017 9565062 -62588820 + (TG)n Simple_repeat Simple_repeat 2 46 0 5188 193 22 16 chr20 9565062 9565356 -62588526 - L1PA16 LINE L1 -1753 4413 4122 408 20 0 0 chr20 9565455 9565504 -62588378 + (CA)n Simple_repeat Simple_repeat 1 49 0 261 234 31 0 chr20 9565539 9565603 -62588279 + MIR SINE MIR 106 171 -91 7592 86 5 20 chr20 9565634 9566707 -62587175 - MER11C LTR ERVK -14 1057 1 211 365 19 10 chr20 9566707 9566811 -62587071 + MIR SINE MIR 158 262 0 476 348 85 49 chr20 9567312 9567950 -62585932 - L1M4 LINE L1 -753 5393 4733 421 241 80 29 chr20 9568213 9568350 -62585532 - MIR SINE MIR 0 262 119 1841 217 74 15 chr20 9570241 9570846 -62583036 - L1MD3 LINE L1 -9 7986 7204 1011 206 122 0 chr20 9571387 9571674 -62582208 + MER33 DNA MER1_type 2 323 -1 439 290 155 5 chr20 9571760 9571960 -62581922 + MIR SINE MIR 20 249 -13 231 61 0 0 chr20 9572121 9572154 -62581728 + (TTTA)n Simple_repeat Simple_repeat 3 35 0 1742 184 3 0 chr20 9572172 9572460 -62581422 - AluJo SINE Alu -23 289 1 330 331 103 36 chr20 9572586 9573081 -62580801 - L2 LINE L2 0 3313 2779 624 251 56 59 chr20 9573198 9573299 -62580583 - L2 LINE L2 -1171 2143 2043 1132 168 0 21 chr20 9573299 9573537 -62580345 + L1MA9 LINE L1 6075 6307 -5 624 251 56 59 chr20 9573537 9573722 -62580160 - L2 LINE L2 -1271 2043 1858 345 251 143 25 chr20 9574547 9574750 -62579132 - L1MC4 LINE L1 -1051 6991 6765 2120 90 28 3 chr20 9575357 9575646 -62578236 + AluSg SINE Alu 4 299 -11 1338 255 28 40 chr20 9576257 9576680 -62577202 + LTR52 LTR ERVL 1 418 -3 217 340 65 52 chr20 9577243 9577396 -62576486 - MIR3 SINE MIR -52 156 2 292 313 84 0 chr20 9578223 9578306 -62575576 + L2 LINE L2 3178 3267 -5 368 321 31 6 chr20 9578891 9579050 -62574832 + L3b LINE CR1 1279 1441 -142 624 256 6 32 chr20 9579148 9579304 -62574578 + MER5B DNA MER1_type 1 152 -26 4233 215 31 57 chr20 9579880 9579909 -62573973 - L1MD2 LINE L1 -10 6349 6321 1765 198 28 5 chr20 9579909 9580298 -62573584 - L1MB4 LINE L1 0 6180 5783 210 91 0 0 chr20 9580298 9580331 -62573551 + (TG)n Simple_repeat Simple_repeat 2 34 0 4233 215 31 57 chr20 9580331 9581621 -62572261 - L1MD2 LINE L1 -36 6323 5055 536 134 10 10 chr20 9581634 9581731 -62572151 + L1PB4 LINE L1 6057 6153 -3 31 0 0 0 chr20 9581731 9581762 -62572120 + AT_rich Low_complexity Low_complexity 1 31 0 283 201 24 120 chr20 9581769 9581934 -62571948 - L1MB4 LINE L1 -1098 5048 4891 3929 202 92 117 chr20 9581936 9583970 -62569912 + L1MCa LINE L1 20 2004 -4422 1048 246 11 8 chr20 9584054 9584318 -62569564 - MER93b LTR ERV1 0 373 109 761 69 62 0 chr20 9584327 9584457 -62569425 + (ATGTG)n Simple_repeat Simple_repeat 2 139 0 1469 213 0 7 chr20 9584459 9584746 -62569136 - AluJb SINE Alu -26 286 2 4801 252 57 15 chr20 9584761 9586766 -62567116 + L1MCa LINE L1 2153 4245 -2181 625 229 21 0 chr20 9586773 9586913 -62566969 + MLT2D LTR ERVL 1 143 -271 370 107 27 70 chr20 9586930 9587117 -62566765 + (TTATA)n Simple_repeat Simple_repeat 1 179 0 * 468 77 89 18 chr20 9587083 9587251 -62566631 + (TA)n Simple_repeat Simple_repeat 1 180 0 23 0 0 0 chr20 9587256 9587279 -62566603 + AT_rich Low_complexity Low_complexity 1 23 0 1212 277 10 0 chr20 9587312 9587601 -62566281 - ERVL LTR ERVL -5061 703 412 207 114 0 0 chr20 9587601 9587636 -62566246 + (TA)n Simple_repeat Simple_repeat 1 35 0 280 205 24 12 chr20 9587708 9587791 -62566091 + (TA)n Simple_repeat Simple_repeat 2 85 0 22 0 0 0 chr20 9587925 9587947 -62565935 + AT_rich Low_complexity Low_complexity 1 22 0 2337 93 3 3 chr20 9589241 9589554 -62564328 - AluSq SINE Alu 0 313 1 1653 185 7 0 chr20 9589675 9589972 -62563910 - AluSx SINE Alu -13 299 1 235 44 44 22 chr20 9590168 9590213 -62563669 + (CAAAAA)n Simple_repeat Simple_repeat 2 47 0 754 248 29 14 chr20 9590615 9590825 -62563057 - L1PB4 LINE L1 -3 6153 5941 264 100 0 0 chr20 9591311 9591351 -62562531 + (TG)n Simple_repeat Simple_repeat 2 41 0 470 288 70 84 chr20 9591351 9591896 -62561986 + HAL1 LINE L1 1153 1689 -818 506 322 56 31 chr20 9593658 9593978 -62559904 - L1ME LINE L1 -347 5815 5488 2415 155 23 28 chr20 9594365 9594797 -62559085 + Tigger2a DNA MER2_type 1 430 -4 28 61 0 0 chr20 9594878 9594927 -62558955 + AT_rich Low_complexity Low_complexity 1 49 0 466 358 66 9 chr20 9595634 9595860 -62558022 + MIR SINE MIR 2 240 -22 252 59 0 0 chr20 9595928 9595962 -62557920 + (CA)n Simple_repeat Simple_repeat 1 34 0 22 56 0 0 chr20 9596188 9596224 -62557658 + AT_rich Low_complexity Low_complexity 1 36 0 2506 51 0 3 chr20 9596910 9597221 -62556661 + AluY SINE Alu 1 310 -1 2321 94 0 7 chr20 9597234 9597542 -62556340 + AluSg SINE Alu 1 306 -4 228 184 0 0 chr20 9597773 9597822 -62556060 + (TA)n Simple_repeat Simple_repeat 2 50 0 7003 177 29 17 chr20 9597899 9600281 -62553601 - L1PB2 LINE L1 0 6151 3735 11145 146 12 5 chr20 9600635 9602426 -62551456 + Tigger1 DNA MER2_type 1 1805 -613 2071 187 37 55 chr20 9602444 9602903 -62550979 + MER34B LTR ERV1 12 462 -103 630 215 8 0 chr20 9602905 9603035 -62550847 + Ricksha_b DNA DNA 2 132 -1122 4670 178 29 51 chr20 9603035 9604061 -62549821 + Ricksha_b DNA DNA 239 1242 -12 32 67 0 0 chr20 9604841 9604901 -62548981 + AT_rich Low_complexity Low_complexity 1 60 0 21 0 0 0 chr20 9605143 9605164 -62548718 + AT_rich Low_complexity Low_complexity 1 21 0 205 339 24 24 chr20 9605568 9605692 -62548190 - L2 LINE L2 -1698 1616 1493 1418 251 42 11 chr20 9607410 9607792 -62546090 + MSTD LTR MaLR 3 396 0 5551 249 107 28 chr20 9607794 9609396 -62544486 + MSTD-int LTR MaLR 2 1730 -5 1628 173 72 45 chr20 9609401 9609776 -62544106 + MSTD LTR MaLR 1 385 -11 742 306 50 50 chr20 9610348 9610433 -62543449 + MLT1K LTR MaLR 188 272 -316 2499 160 19 2 chr20 9610433 9610858 -62543024 + MSTB1 LTR MaLR 1 432 0 742 306 50 50 chr20 9610858 9611171 -62542711 + MLT1K LTR MaLR 271 586 -2 555 200 7 59 chr20 9611819 9611954 -62541928 + LTR49 LTR ERV1 468 595 0 809 179 48 0 chr20 9612064 9612209 -62541673 - FRAM SINE Alu -17 159 8 240 111 0 0 chr20 9612930 9612966 -62540916 + (T)n Simple_repeat Simple_repeat 1 36 0 216 0 0 0 chr20 9613014 9613038 -62540844 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 198 328 56 72 chr20 9613965 9614160 -62539722 + L2 LINE L2 2828 3019 -253 191 330 60 20 chr20 9614331 9614431 -62539451 + L2 LINE L2 3137 3240 -32 2265 252 64 14 chr20 9614677 9615396 -62538486 + L1ME3A LINE L1 5408 6162 -8 2002 131 18 0 chr20 9615405 9615687 -62538195 + AluSg SINE Alu 1 287 -23 19168 176 40 9 chr20 9615837 9616660 -62537222 - L1MA2 LINE L1 0 7723 6927 2087 192 29 12 chr20 9616660 9617081 -62536801 - MSTA LTR MaLR 0 428 1 19168 176 40 9 chr20 9617081 9621674 -62532208 - L1MA2 LINE L1 -796 6927 1993 2284 79 31 0 chr20 9621674 9621965 -62531917 - AluY SINE Alu -11 300 1 19168 176 40 9 chr20 9621965 9624001 -62529881 - L1MA2 LINE L1 -5730 1993 22 237 325 125 0 chr20 9624104 9624184 -62529698 - MIR SINE MIR -152 110 21 528 312 98 27 chr20 9624485 9624780 -62529102 - MLT1I LTR MaLR -22 387 72 369 335 82 14 chr20 9624899 9625192 -62528690 - L1ME LINE L1 -350 5820 5508 35 41 0 0 chr20 9625328 9625377 -62528505 + AT_rich Low_complexity Low_complexity 1 49 0 403 285 27 20 chr20 9625715 9625959 -62527923 + LTR16C LTR ERVL 92 369 -122 37 76 0 0 chr20 9626102 9626181 -62527701 + AT_rich Low_complexity Low_complexity 1 79 0 1983 104 98 14 chr20 9626454 9626800 -62527082 + THE1C LTR MaLR 1 375 0 620 306 39 0 chr20 9627723 9627903 -62525979 - MER5A DNA MER1_type -2 187 1 964 274 150 21 chr20 9629432 9629916 -62523966 - MLT1G3 LTR MaLR -33 497 3 260 178 10 30 chr20 9630958 9631059 -62522823 + (TA)n Simple_repeat Simple_repeat 2 100 0 201 121 0 0 chr20 9631206 9631239 -62522643 + (TC)n Simple_repeat Simple_repeat 2 34 0 278 203 76 63 chr20 9631499 9631578 -62522304 - MER5A DNA MER1_type -1 188 109 470 275 154 7 chr20 9631605 9631754 -62522128 + MER5A DNA MER1_type 13 183 -6 2269 108 0 0 chr20 9631995 9632290 -62521592 - AluSg SINE Alu -15 295 1 2207 131 0 0 chr20 9632867 9633179 -62520703 + AluSx SINE Alu 1 312 0 376 250 0 46 chr20 9633658 9633766 -62520116 - MER5A DNA MER1_type -83 106 4 23 33 0 0 chr20 9633888 9633918 -62519964 + AT_rich Low_complexity Low_complexity 1 30 0 204 284 122 0 chr20 9633986 9634060 -62519822 + MIR SINE MIR 67 149 -59 671 258 98 12 chr20 9634112 9634356 -62519526 + Charlie4a DNA MER1_type 7 271 -237 721 220 0 0 chr20 9634366 9634539 -62519343 + L1 LINE L1 3844 4016 -2130 21 36 0 0 chr20 9634888 9634916 -62518966 + AT_rich Low_complexity Low_complexity 1 28 0 304 364 37 23 chr20 9635232 9635449 -62518433 + MIR SINE MIR 34 253 -9 207 206 111 48 chr20 9635785 9635848 -62518034 + MIR SINE MIR 113 179 -83 21 36 0 0 chr20 9636551 9636579 -62517303 + AT_rich Low_complexity Low_complexity 1 28 0 2097 120 74 34 chr20 9637347 9637697 -62516185 - THE1B LTR MaLR 0 364 1 21 0 0 0 chr20 9638000 9638021 -62515861 + AT_rich Low_complexity Low_complexity 1 21 0 2274 157 29 11 chr20 9638109 9638484 -62515398 + LTR39 LTR ERV1 1 382 -401 1355 207 85 124 chr20 9638484 9639212 -62514670 + LTR8A LTR ERV1 1 700 -27 32 0 0 0 chr20 9639358 9639390 -62514492 + AT_rich Low_complexity Low_complexity 1 32 0 1828 230 35 10 chr20 9639516 9639912 -62513970 + LTR39 LTR ERV1 378 783 0 208 315 54 27 chr20 9640692 9640803 -62513079 - L2 LINE L2 -1 3312 3199 21 36 0 0 chr20 9640889 9640917 -62512965 + AT_rich Low_complexity Low_complexity 1 28 0 2421 84 0 0 chr20 9641472 9641783 -62512099 - AluY SINE Alu 0 311 1 216 395 30 15 chr20 9642425 9642557 -62511325 - MIR3 SINE MIR -63 145 12 368 183 0 0 chr20 9642557 9642617 -62511265 + MER5A DNA MER1_type 1 60 -129 1951 139 14 26 chr20 9642632 9642976 -62510906 + THE1C LTR MaLR 1 340 -35 1261 92 11 22 chr20 9642977 9643162 -62510720 - AluSg/x SINE Alu -13 299 117 696 172 0 0 chr20 9643191 9643307 -62510575 - FLAM_C SINE Alu -16 117 2 229 179 0 0 chr20 9643308 9643347 -62510535 + THE1C LTR MaLR 390 428 0 1633 224 172 5 chr20 9643353 9643778 -62510104 + MLT1D LTR MaLR 6 501 -4 247 268 0 0 chr20 9643798 9643854 -62510028 + MER5A DNA MER1_type 130 185 -4 197 273 109 55 chr20 9644071 9644181 -62509701 + MIR SINE MIR 34 149 -59 750 230 25 30 chr20 9644238 9644473 -62509409 + Charlie4a DNA MER1_type 38 271 -237 6236 198 18 16 chr20 9644482 9644770 -62509112 + L1PA16 LINE L1 3843 4129 -2037 1299 161 68 65 chr20 9644770 9645078 -62508804 + AluJb SINE Alu 3 311 0 6236 198 18 16 chr20 9645078 9647119 -62506763 + L1PA16 LINE L1 4129 6164 -2 337 224 46 101 chr20 9647121 9647358 -62506524 + Charlie4a DNA MER1_type 259 482 -26 181 241 46 81 chr20 9647445 9647532 -62506350 - MIR SINE MIR -123 139 56 1619 170 35 0 chr20 9647675 9647963 -62505919 + AluJb SINE Alu 1 298 -14 356 295 25 16 chr20 9648792 9648914 -62504968 + L3b LINE CR1 1111 1233 -350 310 277 11 11 chr20 9649609 9649703 -62504179 + MLT1I LTR MaLR 71 164 -245 234 288 106 24 chr20 9650421 9650591 -62503291 - LTR33 LTR ERVL 0 521 338 485 279 32 7 chr20 9650656 9650810 -62503072 - LTR33 LTR ERVL -360 161 4 288 0 0 0 chr20 9651468 9651500 -62502382 + (GA)n Simple_repeat Simple_repeat 1 32 0 1221 198 166 32 chr20 9651568 9651972 -62501910 + LTR48 LTR ERV1 330 787 0 260 328 37 42 chr20 9652112 9652301 -62501581 + Charlie8 DNA MER1_type 57 244 -2173 1381 220 91 23 chr20 9653145 9653617 -62500265 - Charlie4a DNA MER1_type 0 508 5 1763 133 11 7 chr20 9654030 9654308 -62499574 + AluSx SINE Alu 24 302 -10 194 192 19 19 chr20 9654696 9654748 -62499134 + MIR SINE MIR 211 262 0 374 351 61 14 chr20 9655923 9656071 -62497811 - MER5A DNA MER1_type -6 183 29 1331 143 28 4 chr20 9656137 9656544 -62497338 - LTR54 LTR ERV1 0 510 8 551 291 86 34 chr20 9656556 9656848 -62497034 - L1ME3A LINE L1 -37 6133 5827 2100 109 0 0 chr20 9657826 9658100 -62495782 - AluSg SINE Alu -16 294 21 332 318 101 34 chr20 9658253 9658520 -62495362 - L2 LINE L2 -92 3221 2937 221 333 175 0 chr20 9658524 9658707 -62495175 - MIR SINE MIR -25 237 23 2122 129 0 3 chr20 9658716 9659026 -62494856 - AluSc SINE Alu 0 309 1 2233 105 7 0 chr20 9659290 9659594 -62494288 + AluY SINE Alu 1 306 -5 2857 122 5 97 chr20 9660082 9660538 -62493344 + L1PA16 LINE L1 5650 6045 -121 1842 180 71 20 chr20 9660538 9660944 -62492938 - MSTA LTR MaLR 0 428 2 2857 122 5 97 chr20 9660944 9661055 -62492827 + L1PA16 LINE L1 6045 6165 -1 22 0 0 0 chr20 9661430 9661452 -62492430 + AT_rich Low_complexity Low_complexity 1 22 0 30 45 0 0 chr20 9662426 9662470 -62491412 + AT_rich Low_complexity Low_complexity 1 44 0 436 199 81 7 chr20 9663285 9663421 -62490461 + L1MA7 LINE L1 6146 6291 0 372 335 137 57 chr20 9663700 9664139 -62489743 - L2 LINE L2 -11 3302 2829 225 200 82 64 chr20 9664647 9664757 -62489125 - L2 LINE L2 -1046 2268 2157 295 352 59 43 chr20 9664964 9665268 -62488614 + L2 LINE L2 2250 2558 -756 597 270 6 12 chr20 9665382 9665545 -62488337 - MER58B DNA MER1_type -2 339 178 506 308 158 12 chr20 9666926 9667325 -62486557 + LTR16A1 LTR ERVL 1 457 0 200 200 0 0 chr20 9667550 9667585 -62486297 + (CA)n Simple_repeat Simple_repeat 1 35 0 21 0 0 0 chr20 9667642 9667663 -62486219 + AT_rich Low_complexity Low_complexity 1 21 0 725 223 80 11 chr20 9669776 9669951 -62483931 + L1MB4 LINE L1 5845 6031 -149 2582 218 49 5 chr20 9670187 9670798 -62483084 - L1MB4 LINE L1 -4 6176 5539 1741 243 19 2 chr20 9670829 9671294 -62482588 - L1MB4 LINE L1 -765 5381 4909 338 342 43 27 chr20 9673316 9673500 -62480382 - MIR3 SINE MIR -4 204 18 276 257 62 9 chr20 9675294 9675407 -62478475 - LTR33 LTR ERVL -57 464 346 428 371 10 10 chr20 9675457 9675662 -62478220 - LTR33 LTR ERVL -257 264 60 291 274 71 0 chr20 9675754 9675838 -62478044 + L1ME3A LINE L1 17 106 -6434 451 96 58 0 chr20 9675845 9675949 -62477933 + (TAGA)n Simple_repeat Simple_repeat 4 113 0 2247 272 58 58 chr20 9675949 9676994 -62476888 + L1ME3A LINE L1 105 1040 -5500 557 228 22 10 chr20 9676991 9677140 -62476742 - L1MDa LINE L1 -4604 1778 1521 * 1321 174 66 7 chr20 9677140 9677427 -62476455 - Ricksha DNA DNA -17 2837 2534 3588 149 58 35 chr20 9677433 9678213 -62475669 - Ricksha DNA DNA -384 2867 1973 2675 26 0 0 chr20 9678213 9678524 -62475358 - AluYa5 SINE Alu 0 311 1 3588 149 58 35 chr20 9678524 9678823 -62475059 - Ricksha DNA DNA -1278 1973 1682 5154 280 33 29 chr20 9679670 9679914 -62473968 + L1P LINE L1 1487 1728 -4418 2398 86 0 0 chr20 9679914 9680216 -62473666 + AluSx SINE Alu 1 302 -10 5154 280 33 29 chr20 9680216 9682042 -62471840 + L1P LINE L1 1728 3566 -2580 1283 235 0 0 chr20 9684306 9684540 -62469342 + Tigger7 DNA MER2_type 3 236 -497 1078 217 9 4 chr20 9684546 9684776 -62469106 - MER46A DNA MER2_type -1 235 5 403 195 24 0 chr20 9684778 9684860 -62469022 + Tigger7 DNA MER2_type 2407 2490 -1 325 294 105 14 chr20 9684922 9685065 -62468817 - L1MDa LINE L1 -5398 1165 1010 3256 282 92 30 chr20 9685219 9687572 -62466310 + L1ME3A LINE L1 3204 5762 -794 2110 147 26 26 chr20 9687572 9687961 -62465921 + L1PB1 LINE L1 5750 6138 -13 3256 282 92 30 chr20 9687961 9688400 -62465482 + L1ME3A LINE L1 5762 6172 -384 527 254 113 60 chr20 9688401 9688684 -62465198 + L1ME3A LINE L1 6241 6538 -26 31 92 0 0 chr20 9688806 9688893 -62464989 + AT_rich Low_complexity Low_complexity 1 87 0 1524 197 0 16 chr20 9688897 9689202 -62464680 + AluJo SINE Alu 1 300 -12 484 296 49 128 chr20 9689418 9689694 -62464188 - L2 LINE L2 -452 2862 2566 338 182 39 0 chr20 9689694 9689771 -62464111 + L1MB3 LINE L1 6091 6170 -13 484 296 49 128 chr20 9689771 9690142 -62463740 - L2 LINE L2 -748 2566 2266 437 297 121 25 chr20 9690158 9690397 -62463485 - MIR SINE MIR 0 262 1 1785 166 0 10 chr20 9690870 9691172 -62462710 + AluJb SINE Alu 1 299 -13 13784 191 31 18 chr20 9691530 9694152 -62459730 + L1MA3 LINE L1 16 2602 -5122 2215 118 0 0 chr20 9694152 9694457 -62459425 + AluSx SINE Alu 1 305 -7 13784 191 31 18 chr20 9694457 9697145 -62456737 + L1MA3 LINE L1 2602 5786 -1938 503 123 0 12 chr20 9697145 9697226 -62456656 - MADE1 DNA Mariner 0 80 1 13784 191 31 18 chr20 9697226 9699190 -62454692 + L1MA3 LINE L1 5786 7723 -1 739 342 70 23 chr20 9699491 9699889 -62453993 - LTR16C LTR ERVL -4 487 71 1960 239 105 2 chr20 9700640 9701125 -62452757 - MER21B LTR ERV1 -113 750 216 1265 226 30 15 chr20 9701130 9701400 -62452482 + MSTD LTR MaLR 123 396 0 875 207 57 0 chr20 9701400 9701593 -62452289 - L1 LINE L1 -900 5246 5043 * 3901 178 20 24 chr20 9701592 9702372 -62451510 + L1MB1 LINE L1 5392 6168 0 246 329 49 0 chr20 9703356 9703438 -62450444 + L2 LINE L2 2413 2498 -816 346 241 0 0 chr20 9703714 9703793 -62450089 - L1ME4a LINE L1 -296 5825 5747 858 230 158 34 chr20 9704125 9704447 -62449435 - MLT1A1 LTR MaLR 0 365 4 3137 187 20 6 chr20 9704684 9705320 -62448562 - L1MC1 LINE L1 0 6333 5689 248 241 89 0 chr20 9705320 9705399 -62448483 - L1 LINE L1 -1846 4300 4215 291 165 41 10 chr20 9705404 9705501 -62448381 - L1 LINE L1 -2974 3172 3073 810 153 20 33 chr20 9705516 9705666 -62448216 - L1MC1 LINE L1 -769 5564 5417 * 6447 162 13 9 chr20 9705663 9706021 -62447861 - L1PB1 LINE L1 -3 6148 5793 192 77 0 0 chr20 9706021 9706047 -62447835 + (TA)n Simple_repeat Simple_repeat 1 26 0 6447 162 13 9 chr20 9706047 9707848 -62446034 - L1PB1 LINE L1 -358 5793 3977 364 181 13 110 chr20 9707847 9708002 -62445880 - L1 LINE L1 -3219 2927 2788 * 21 0 0 0 chr20 9708925 9708946 -62444936 + AT_rich Low_complexity Low_complexity 1 21 0 1069 249 20 23 chr20 9708971 9709324 -62444558 + L1 LINE L1 4359 4710 -1436 27 0 0 0 chr20 9709340 9709367 -62444515 + AT_rich Low_complexity Low_complexity 1 27 0 3995 182 59 39 chr20 9709367 9709618 -62444264 - L1MA4A LINE L1 -24 6981 6736 204 40 0 0 chr20 9709618 9709643 -62444239 + (TG)n Simple_repeat Simple_repeat 2 26 0 3995 182 59 39 chr20 9709643 9711119 -62442763 - L1MA4A LINE L1 -269 6736 5159 6242 215 20 9 chr20 9711119 9712633 -62441249 - L1MA4A LINE L1 -2002 4846 3315 4368 194 25 68 chr20 9712632 9713441 -62440441 - L1MA4A LINE L1 -4309 2540 1795 * 723 197 92 0 chr20 9713441 9713583 -62440299 - FRAM SINE Alu -10 156 2 4368 194 25 68 chr20 9713583 9713951 -62439931 - L1MA4A LINE L1 -5054 1795 1413 971 265 63 40 chr20 9713954 9714045 -62439837 - L1M4 LINE L1 -2332 3814 3727 2281 97 0 0 chr20 9714045 9714345 -62439537 + AluY SINE Alu 2 301 -10 971 265 63 40 chr20 9714345 9714373 -62439509 - L1M4 LINE L1 -2419 3727 3701 297 0 0 0 chr20 9714373 9714406 -62439476 + (TG)n Simple_repeat Simple_repeat 2 34 0 971 265 63 40 chr20 9714406 9714681 -62439201 - L1M4 LINE L1 -2445 3701 3410 1112 129 7 0 chr20 9714681 9714874 -62439008 - AluSg SINE Alu 0 320 127 507 222 0 0 chr20 9714877 9714994 -62438888 + (CATATA)n Simple_repeat Simple_repeat 5 121 0 1002 81 0 0 chr20 9714999 9715122 -62438760 - AluSg SINE Alu -187 123 1 2520 226 40 12 chr20 9715127 9715425 -62438457 - L1M4 LINE L1 -2727 3419 3131 2732 10 3 0 chr20 9715425 9715727 -62438155 - AluYa5 SINE Alu -8 303 1 2520 226 40 12 chr20 9715727 9716188 -62437694 - L1M4 LINE L1 -3015 3131 2639 1632 199 58 17 chr20 9716572 9716919 -62436963 + LTR22 LTR ERVK 1 361 -148 301 327 51 56 chr20 9716971 9717185 -62436697 - L2 LINE L2 -542 2772 2560 909 283 109 38 chr20 9717232 9717780 -62436102 + MLT1G1 LTR MaLR 1 587 -8 461 284 13 79 chr20 9718585 9718814 -62435068 + L2 LINE L2 3100 3313 0 286 324 36 18 chr20 9719524 9719635 -62434247 - L2 LINE L2 -17 3255 3143 259 321 138 36 chr20 9719622 9719927 -62433955 - L2 LINE L2 -702 2612 2277 * 249 295 0 41 chr20 9720032 9720154 -62433728 + GA-rich Low_complexity Low_complexity 4 120 0 219 139 0 0 chr20 9720371 9720407 -62433475 + (TG)n Simple_repeat Simple_repeat 2 37 0 345 301 35 21 chr20 9720449 9720592 -62433290 - L2 LINE L2 -1884 1430 1286 295 260 53 40 chr20 9720922 9721072 -62432810 + L1ME4a LINE L1 5782 5933 -188 1328 241 36 42 chr20 9721087 9721369 -62432513 + L1ME4a LINE L1 5493 5772 -398 2531 53 0 3 chr20 9721369 9721672 -62432210 - AluY SINE Alu -9 302 1 1328 241 36 42 chr20 9721672 9721837 -62432045 + L1ME4a LINE L1 5772 5937 -233 617 86 21 0 chr20 9721839 9721932 -62431950 + L1PB2 LINE L1 6049 6143 -8 280 247 80 7 chr20 9722075 9722225 -62431657 + L1ME4a LINE L1 5961 6121 0 28 29 0 0 chr20 9722403 9722438 -62431444 + AT_rich Low_complexity Low_complexity 1 35 0 185 386 85 7 chr20 9724147 9724300 -62429582 - MIR SINE MIR -93 169 5 1088 286 59 53 chr20 9724344 9724871 -62429011 + MLT1H1 LTR MaLR 11 540 -15 197 264 33 77 chr20 9724988 9725079 -62428803 + MIR SINE MIR 5 91 -171 216 143 43 0 chr20 9725116 9725186 -62428696 + (TA)n Simple_repeat Simple_repeat 2 74 0 1514 264 8 60 chr20 9725208 9725711 -62428171 - MLT2B1 LTR ERVL -42 478 2 928 218 76 17 chr20 9725714 9726003 -62427879 - L1MA9 LINE L1 -2436 3710 3405 * 6472 200 29 13 chr20 9725997 9727504 -62426378 + L1MA9 LINE L1 3697 5228 -918 592 116 18 0 chr20 9727512 9727624 -62426258 + L1MA9 LINE L1 5335 5448 -852 3235 153 13 10 chr20 9727624 9728218 -62425664 + L1MA4A LINE L1 5703 6299 -4 4403 138 40 51 chr20 9728237 9728941 -62424941 + L1MA9 LINE L1 5476 6171 -141 1936 189 72 12 chr20 9728941 9729343 -62424539 + MSTB LTR MaLR 1 426 0 4403 138 40 51 chr20 9729343 9729484 -62424398 + L1MA9 LINE L1 6171 6312 0 11039 183 24 27 chr20 9729485 9731645 -62422237 - ERVL-B1 LTR ERVL -3 5761 3610 * 11060 200 13 10 chr20 9731640 9733682 -62420200 - ERVL-B1 LTR ERVL -2482 3282 1235 2884 230 104 82 chr20 9733699 9734790 -62419092 - ERVL-B1 LTR ERVL -4648 1116 2 264 77 0 0 chr20 9734871 9734910 -62418972 + (TA)n Simple_repeat Simple_repeat 2 40 0 1233 253 17 111 chr20 9734916 9735482 -62418400 - MLT2B3 LTR ERVL -46 491 3 276 324 29 0 chr20 9735484 9735589 -62418293 + MIR SINE MIR 154 261 -1 297 261 84 8 chr20 9736220 9736339 -62417543 - L1ME3A LINE L1 -1 6169 6042 698 190 229 0 chr20 9736429 9736608 -62417274 + MIR SINE MIR 32 251 -11 25 0 0 0 chr20 9738519 9738544 -62415338 + AT_rich Low_complexity Low_complexity 1 25 0 205 200 43 0 chr20 9738566 9738636 -62415246 + (TATATG)n Simple_repeat Simple_repeat 5 77 0 1851 145 0 41 chr20 9739173 9739490 -62414392 - AluJo SINE Alu 0 312 9 438 292 139 39 chr20 9740354 9740635 -62413247 - L2 LINE L2 0 3313 3005 261 309 56 24 chr20 9741112 9741238 -62412644 + MER5A DNA MER1_type 10 139 -50 * 330 341 113 24 chr20 9741210 9741517 -62412365 - L2 LINE L2 -219 3053 2726 22 35 0 0 chr20 9741986 9742015 -62411867 + AT_rich Low_complexity Low_complexity 1 29 0 657 218 41 86 chr20 9742296 9742493 -62411389 + MER20 DNA MER1_type 31 218 -1 246 320 118 62 chr20 9742734 9742912 -62410970 + MIR3 SINE MIR 16 203 -5 306 350 17 8 chr20 9742914 9743034 -62410848 + MLT2E LTR ERVL 1 121 -507 245 304 185 22 chr20 9743055 9743239 -62410643 + MLT2F LTR ERVL 223 436 -227 284 207 0 85 chr20 9743406 9743443 -62410439 + MLT2E LTR ERVL 533 561 -67 2234 160 85 5 chr20 9743443 9743867 -62410015 + LTR22A LTR ERVK 1 458 0 284 207 0 85 chr20 9743867 9743911 -62409971 + MLT2E LTR ERVL 561 607 -21 2022 149 0 0 chr20 9744031 9744326 -62409556 + AluSg SINE Alu 1 295 -15 231 265 15 0 chr20 9744679 9744747 -62409135 - MER103 DNA DNA -91 75 7 315 348 0 0 chr20 9745158 9745247 -62408635 - MIR SINE MIR -148 114 26 21 0 0 0 chr20 9745980 9746001 -62407881 + AT_rich Low_complexity Low_complexity 1 21 0 7271 42 3 10 chr20 9746001 9747057 -62406825 - L1PA4 LINE L1 -3 6152 5097 1681 189 0 16 chr20 9747658 9747964 -62405918 - AluJo SINE Alu -9 303 3 12119 184 54 24 chr20 9748141 9749822 -62404060 + L1M1 LINE L1 13 1641 -5924 315 0 0 0 chr20 9749822 9749857 -62404025 + (GA)n Simple_repeat Simple_repeat 2 36 0 12119 184 54 24 chr20 9749857 9750208 -62403674 + L1M1 LINE L1 1641 1980 -5585 640 13 0 0 chr20 9750208 9750287 -62403595 + L1PA2 LINE L1 6073 6151 -4 12119 184 54 24 chr20 9750287 9750405 -62403477 + L1M1 LINE L1 1980 2093 -5472 2127 113 10 0 chr20 9750405 9750698 -62403184 + AluSc SINE Alu 1 296 -13 12119 184 54 24 chr20 9750698 9750991 -62402891 + L1M1 LINE L1 2093 2533 -5032 2877 142 6 18 chr20 9750985 9751500 -62402382 + L1M1 LINE L1 2887 3395 -4170 * 16253 168 24 23 chr20 9751554 9752804 -62401078 + L1MA2 LINE L1 663 1910 -5813 1679 150 177 11 chr20 9752804 9753171 -62400711 + MSTA LTR MaLR 1 428 0 16253 168 24 23 chr20 9753171 9758975 -62394907 + L1MA2 LINE L1 1910 7719 -4 23 33 0 0 chr20 9758984 9759014 -62394868 + AT_rich Low_complexity Low_complexity 1 30 0 280 303 92 54 chr20 9759044 9759229 -62394653 - MLT1K LTR MaLR -172 416 225 185 257 29 71 chr20 9760394 9760464 -62393418 + L2 LINE L2 3184 3250 -63 297 274 153 0 chr20 9760553 9760677 -62393205 + MIR SINE MIR 70 212 -50 27 92 0 0 chr20 9761222 9761298 -62392584 + AT_rich Low_complexity Low_complexity 1 76 0 2545 255 88 17 chr20 9761494 9762584 -62391298 - L1MD2 LINE L1 -70 6289 5128 310 247 66 44 chr20 9762963 9763164 -62390718 - L1MD2 LINE L1 -2969 3177 2969 324 0 0 0 chr20 9763164 9763200 -62390682 + (TG)n Simple_repeat Simple_repeat 2 37 0 310 247 66 44 chr20 9763200 9763225 -62390657 - L1MD2 LINE L1 -3177 2969 2946 * 784 221 44 15 chr20 9763203 9763407 -62390475 - L1MC2 LINE L1 -8 6336 6127 941 206 31 51 chr20 9763585 9763874 -62390008 - LTR56 LTR ERV1 -1 436 179 1398 244 74 30 chr20 9763874 9764472 -62389410 + L1MC3 LINE L1 831 1454 -4972 7378 225 58 54 chr20 9764519 9767848 -62386034 + L1MC3 LINE L1 2032 5347 -2718 2030 162 0 0 chr20 9767848 9768156 -62385726 - AluSx SINE Alu -4 308 1 7378 225 58 54 chr20 9768156 9769944 -62383938 + L1MC3 LINE L1 5347 7445 -620 249 324 0 0 chr20 9769944 9770012 -62383870 + MLT1J2 LTR MaLR 35 102 -465 7378 225 58 54 chr20 9770012 9770614 -62383268 + L1MC3 LINE L1 7445 8043 -22 2774 12 3 0 chr20 9770617 9770938 -62382944 - L1PA3 LINE L1 0 6155 5834 41 87 0 0 chr20 9770962 9771066 -62382816 + AT_rich Low_complexity Low_complexity 1 104 0 476 29 159 0 chr20 9771221 9771290 -62382592 + MADE1 DNA Mariner 1 80 0 316 316 51 59 chr20 9771512 9771749 -62382133 - MIR SINE MIR -25 237 3 905 64 0 0 chr20 9772174 9772284 -62381598 + AluY SINE Alu 197 306 -5 8114 148 44 82 chr20 9772831 9774593 -62379289 - pTR5 LTR ERV1 -1 2437 743 269 246 0 25 chr20 9774785 9774884 -62378998 - L1ME LINE L1 -515 5606 5516 339 293 79 7 chr20 9774884 9775024 -62378858 + MLT1J2 LTR MaLR 1 150 -300 312 325 183 6 chr20 9775070 9775239 -62378643 + MLT1J2 LTR MaLR 207 405 -45 330 262 54 54 chr20 9775292 9775802 -62378080 - L1M2 LINE L1 -684 5486 5008 21 36 0 0 chr20 9775835 9775863 -62378019 + AT_rich Low_complexity Low_complexity 1 28 0 419 269 82 82 chr20 9775915 9776305 -62377577 - L1ME LINE L1 -1301 4845 4456 824 148 0 0 chr20 9776999 9777121 -62376761 + FRAM SINE Alu 20 141 -35 1501 232 197 7 chr20 9777343 9777887 -62375995 + MER76 LTR ERV 1 647 -41 869 256 60 75 chr20 9778706 9778746 -62375136 - LTR16A1 LTR ERVL 0 457 418 198 0 0 0 chr20 9778746 9778768 -62375114 + (TG)n Simple_repeat Simple_repeat 1 22 0 869 256 60 75 chr20 9778768 9779191 -62374691 - LTR16A1 LTR ERVL -39 418 1 492 304 173 0 chr20 9780682 9780902 -62372980 + MIR SINE MIR 5 262 0 468 127 13 0 chr20 9781372 9781451 -62372431 - MADE1 DNA Mariner 0 80 1 525 229 43 55 chr20 9781559 9781812 -62372070 + LTR37B LTR ERV1 197 446 -22 403 88 15 0 chr20 9781813 9781881 -62372001 - L1MD2 LINE L1 -3 6356 6288 1356 87 0 16 chr20 9781881 9782065 -62371817 + AluSq SINE Alu 133 313 0 1980 132 24 3 chr20 9782098 9782456 -62371426 + AluSx SINE Alu 1 364 0 4441 235 73 43 chr20 9782460 9783857 -62370025 - L1MD1 LINE L1 -53 6583 5228 1831 156 11 0 chr20 9783857 9784174 -62369708 - AluJb SINE Alu 0 320 1 4441 235 73 43 chr20 9784174 9785138 -62368744 - L1MD1 LINE L1 -1408 5228 4130 1569 209 40 0 chr20 9785138 9785440 -62368442 - 7SLRNA srpRNA srpRNA -3 317 4 4441 235 73 43 chr20 9785440 9786164 -62367718 - L1MD1 LINE L1 -2506 4130 3429 963 229 84 57 chr20 9786159 9786445 -62367437 - L1MD1 LINE L1 -3895 2645 2368 * 1706 161 23 10 chr20 9786445 9786744 -62367138 - AluSx SINE Alu -7 305 3 1597 174 0 7 chr20 9786746 9787016 -62366866 - AluJb SINE Alu -21 291 24 963 229 84 57 chr20 9787016 9787274 -62366608 - L1MD1 LINE L1 -4172 2368 2207 319 268 162 0 chr20 9787317 9787459 -62366423 + MIR SINE MIR 95 259 -3 666 293 147 39 chr20 9788024 9788413 -62365469 - LTR16A1 LTR ERVL 0 457 27 3302 124 9 50 chr20 9789475 9790093 -62363789 + MER4B LTR ERV1 1 770 -9 21 0 0 0 chr20 9792415 9792436 -62361446 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr20 9792478 9792499 -62361383 + AT_rich Low_complexity Low_complexity 1 21 0 2882 16 0 0 chr20 9792839 9793155 -62360727 - AluYb8 SINE Alu -2 316 1 464 320 144 36 chr20 9793431 9793658 -62360224 - L1M4 LINE L1 -2734 3412 3211 225 0 0 0 chr20 9793658 9793683 -62360199 + (TTTTG)n Simple_repeat Simple_repeat 3 27 0 464 320 144 36 chr20 9793683 9793792 -62360090 - L1M4 LINE L1 -2935 3211 3115 1786 141 19 0 chr20 9793792 9794055 -62359827 - AluSx SINE Alu -14 298 31 464 320 144 36 chr20 9794055 9794579 -62359303 - L1M4 LINE L1 -3031 3115 2458 262 143 61 0 chr20 9795478 9795527 -62358355 + MADE1 DNA Mariner 1 52 -28 364 231 90 60 chr20 9795804 9795938 -62357944 - L2 LINE L2 0 3313 3176 337 250 0 0 chr20 9795989 9796057 -62357825 + L2 LINE L2 3241 3308 -5 825 218 55 56 chr20 9797163 9797546 -62356336 - MLT1C LTR MaLR -4 463 1 200 287 18 6 chr20 9797962 9798126 -62355756 + (TTAGGG)n Simple_repeat Simple_repeat 4 169 0 227 200 109 0 chr20 9798262 9798317 -62355565 + MIR SINE MIR 84 144 -64 4007 190 140 15 chr20 9798323 9799748 -62354134 - MER52A LTR ERV1 0 1755 1 22 0 0 0 chr20 9799931 9799953 -62353929 + AT_rich Low_complexity Low_complexity 1 22 0 2522 158 12 5 chr20 9800498 9800922 -62352960 + MSTA LTR MaLR 2 428 0 240 167 0 0 chr20 9803095 9803143 -62350739 + GA-rich Low_complexity Low_complexity 2 49 0 25 0 0 0 chr20 9803216 9803241 -62350641 + AT_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr20 9804779 9804800 -62349082 + AT_rich Low_complexity Low_complexity 1 21 0 504 266 158 13 chr20 9808043 9808201 -62345681 - MER5A DNA MER1_type 0 189 9 265 177 51 0 chr20 9809559 9809638 -62344244 + (CCCTAG)n Simple_repeat Simple_repeat 1 83 0 237 235 73 29 chr20 9810605 9810673 -62343209 + MIR SINE MIR 184 254 -8 265 183 0 37 chr20 9811029 9811111 -62342771 + GA-rich Low_complexity Low_complexity 3 81 0 186 43 0 0 chr20 9811937 9811960 -62341922 + (ATG)n Simple_repeat Simple_repeat 1 23 0 263 331 63 8 chr20 9811964 9812091 -62341791 - MIR SINE MIR -10 252 119 24 53 0 0 chr20 9812516 9812554 -62341328 + AT_rich Low_complexity Low_complexity 1 38 0 298 247 14 0 chr20 9812580 9812653 -62341229 - MIR SINE MIR -148 114 41 205 152 0 0 chr20 9812776 9812809 -62341073 + CT-rich Low_complexity Low_complexity 2 34 0 306 0 0 0 chr20 9812810 9812844 -62341038 + (CA)n Simple_repeat Simple_repeat 2 35 0 23 33 0 0 chr20 9813019 9813049 -62340833 + AT_rich Low_complexity Low_complexity 1 30 0 183 360 105 0 chr20 9813362 9813476 -62340406 + L2 LINE L2 3137 3262 -10 7223 25 5 0 chr20 9814128 9815009 -62338873 + L1PA3 LINE L1 5301 6185 0 2345 59 0 50 chr20 9815818 9816141 -62337741 - AluY SINE Alu -4 307 1 375 271 79 62 chr20 9816156 9816333 -62337549 + MER102a DNA MER1_type 148 327 -3 207 0 0 0 chr20 9817653 9817676 -62336206 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 242 290 176 11 chr20 9817833 9818009 -62335873 + L2 LINE L2 2968 3172 -141 1160 146 0 0 chr20 9818012 9818190 -62335692 - AluSg/x SINE Alu -9 303 126 1862 128 10 20 chr20 9818191 9818352 -62335530 - AluSx SINE Alu -17 295 137 1877 117 47 3 chr20 9818352 9818650 -62335232 - AluSx SINE Alu -1 311 1 1862 128 10 20 chr20 9818650 9818786 -62335096 - AluSx SINE Alu -175 137 1 478 271 19 32 chr20 9818786 9818941 -62334941 + L2 LINE L2 3161 3313 0 191 291 0 18 chr20 9819012 9819067 -62334815 + L2 LINE L2 3258 3311 -2 22 35 0 0 chr20 9819728 9819757 -62334125 + AT_rich Low_complexity Low_complexity 1 29 0 323 262 158 79 chr20 9820560 9820724 -62333158 + MER5A DNA MER1_type 6 182 -7 726 257 101 68 chr20 9821115 9821648 -62332234 - MLT1H1 LTR MaLR -4 551 1 1970 54 0 0 chr20 9821671 9821930 -62331952 - L1P LINE L1 -4620 1526 1268 257 290 97 41 chr20 9822159 9822304 -62331578 + LTR33 LTR ERVL 1 153 -368 21 36 0 0 chr20 9822536 9822564 -62331318 + AT_rich Low_complexity Low_complexity 1 28 0 443 311 72 27 chr20 9823310 9823532 -62330350 + MIR SINE MIR 29 260 -2 254 281 61 0 chr20 9823563 9823645 -62330237 + L1ME LINE L1 5738 5824 -297 1409 137 194 0 chr20 9823776 9824024 -62329858 - AluSx SINE Alu -16 296 1 297 342 37 71 chr20 9824229 9824583 -62329299 + MLT1J2 LTR MaLR 104 445 -5 39 22 0 0 chr20 9824813 9824859 -62329023 + AT_rich Low_complexity Low_complexity 1 46 0 22 0 0 0 chr20 9825345 9825367 -62328515 + AT_rich Low_complexity Low_complexity 1 22 0 958 358 13 22 chr20 9826267 9827037 -62326845 + L1MEc LINE L1 196 958 -5605 354 262 84 63 chr20 9827063 9827254 -62326628 + L1MEc LINE L1 785 979 -5405 428 275 46 38 chr20 9827316 9827578 -62326304 + L1MEc LINE L1 1158 1421 -5142 2083 234 75 0 chr20 9827578 9828043 -62325839 - MLT1D LTR MaLR 0 505 6 1364 266 68 70 chr20 9828047 9828116 -62325766 + L1MEc LINE L1 1265 1333 -5049 1466 191 10 27 chr20 9828116 9828414 -62325468 - AluJo SINE Alu -19 293 1 1364 266 68 70 chr20 9828414 9828953 -62324929 + L1MEc LINE L1 1333 1872 -4510 180 0 0 0 chr20 9828953 9828973 -62324909 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1364 266 68 70 chr20 9828973 9829025 -62324857 + L1MEc LINE L1 1872 1923 -4459 964 251 18 0 chr20 9829025 9829244 -62324638 + MER58A DNA MER1_type 1 223 -1 1364 266 68 70 chr20 9829244 9829664 -62324218 + L1MEc LINE L1 1923 2342 -4040 1899 65 8 0 chr20 9829664 9829910 -62323972 + L1PA5 LINE L1 5904 6151 -3 1364 266 68 70 chr20 9829910 9830462 -62323420 + L1MEc LINE L1 2342 3027 -3355 22 0 0 0 chr20 9830617 9830639 -62323243 + AT_rich Low_complexity Low_complexity 1 22 0 234 0 0 0 chr20 9830694 9830720 -62323162 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 261 0 0 0 chr20 9831003 9831032 -62322850 + (TG)n Simple_repeat Simple_repeat 2 30 0 195 100 0 0 chr20 9831183 9831213 -62322669 + (CATA)n Simple_repeat Simple_repeat 3 32 0 1930 150 3 28 chr20 9831633 9831953 -62321929 - AluJo SINE Alu 0 312 1 781 255 85 5 chr20 9832039 9832239 -62321643 + MIR SINE MIR 42 257 -5 29 94 0 0 chr20 9833511 9833596 -62320286 + AT_rich Low_complexity Low_complexity 1 85 0 3557 162 12 65 chr20 9834261 9834990 -62318892 + LTR8 LTR ERV1 1 691 0 26 64 0 0 chr20 9836212 9836259 -62317623 + AT_rich Low_complexity Low_complexity 1 47 0 270 382 18 0 chr20 9837636 9837746 -62316136 - MIR3 SINE MIR -52 156 45 319 284 104 22 chr20 9837893 9838027 -62315855 + MSTD LTR MaLR 4 148 -217 2145 168 0 0 chr20 9838092 9838449 -62315433 - L1PB4 LINE L1 -17 6139 5783 330 161 16 0 chr20 9838454 9838516 -62315366 + L1MC4 LINE L1 6641 6703 -1339 3892 154 18 7 chr20 9838524 9839720 -62314162 - L1PB4 LINE L1 -374 5782 4572 993 180 35 0 chr20 9839723 9839895 -62313987 + MSTD LTR MaLR 219 396 0 5854 234 124 26 chr20 9839896 9841475 -62312407 + MSTD-int LTR MaLR 2 1735 0 1014 166 105 33 chr20 9841475 9841796 -62312086 + MSTD LTR MaLR 1 396 0 2633 156 12 0 chr20 9841950 9842373 -62311509 + MSTA LTR MaLR 1 428 0 226 26 79 0 chr20 9843179 9843217 -62310665 + A-rich Low_complexity Low_complexity 4 44 0 385 337 120 4 chr20 9843237 9843306 -62310576 - LTR33A LTR ERVL -94 429 369 3568 122 12 81 chr20 9843306 9843988 -62309894 + MER41B LTR ERV1 1 635 0 385 337 120 4 chr20 9843988 9844185 -62309697 - LTR33A LTR ERVL -154 369 132 764 297 115 60 chr20 9844257 9844806 -62309076 - MLT1G LTR MaLR -2 588 10 376 169 0 0 chr20 9848504 9848569 -62305313 - MER81 DNA DNA -48 66 2 182 218 0 18 chr20 9848675 9848730 -62305152 + CT-rich Low_complexity Low_complexity 2 55 0 309 320 63 26 chr20 9849027 9849188 -62304694 - MIR SINE MIR -56 206 40 1300 183 23 115 chr20 9849754 9850153 -62303729 + MLT1A1 LTR MaLR 4 365 0 304 316 52 19 chr20 9850629 9850784 -62303098 - MIR SINE MIR 0 262 103 194 167 67 100 chr20 9851843 9851903 -62301979 - L2 LINE L2 -85 3228 3171 1527 217 73 11 chr20 9852035 9852473 -62301409 + Charlie4a DNA MER1_type 44 508 0 183 262 24 48 chr20 9852534 9852618 -62301264 - L2 LINE L2 -270 3002 2921 4094 36 4 2 chr20 9852708 9853203 -62300679 + L1PA4 LINE L1 5657 6152 -3 192 97 0 0 chr20 9853206 9853237 -62300645 + (A)n Simple_repeat Simple_repeat 1 31 0 416 19 19 0 chr20 9854093 9854146 -62299736 + (TC)n Simple_repeat Simple_repeat 1 54 0 342 0 0 0 chr20 9854145 9854183 -62299699 + (CA)n Simple_repeat Simple_repeat 1 38 0 * 3020 171 20 12 chr20 9856138 9856729 -62297153 - L1MA8 LINE L1 0 6291 5696 193 85 0 43 chr20 9856731 9856778 -62297104 + (TAAA)n Simple_repeat Simple_repeat 4 48 0 1800 160 10 0 chr20 9856800 9857003 -62296879 - L1MA8 LINE L1 -599 5692 5483 971 164 273 17 chr20 9857003 9857241 -62296641 - AluJb SINE Alu -3 299 1 1800 160 10 0 chr20 9857241 9857350 -62296532 - L1MA8 LINE L1 -808 5483 5377 1699 170 0 32 chr20 9857619 9857931 -62295951 + AluJb SINE Alu 11 312 0 316 396 6 59 chr20 9858434 9858877 -62295005 - L2 LINE L2 -47 3225 2817 916 238 116 62 chr20 9858890 9859260 -62294622 - LTR16C LTR ERVL 0 491 102 294 344 39 28 chr20 9859469 9859649 -62294233 - MIR SINE MIR -52 210 29 2199 105 0 3 chr20 9861270 9861566 -62292316 - AluSx SINE Alu -17 295 1 237 250 73 0 chr20 9862596 9862664 -62291218 - MIR SINE MIR -70 192 120 677 286 6 11 chr20 9862694 9862872 -62291010 - MER5B DNA MER1_type -1 177 1 433 288 124 34 chr20 9863097 9863330 -62290552 - MIR SINE MIR 0 262 9 440 301 44 54 chr20 9864231 9864527 -62289355 + HAL1b LINE L1 415 707 -641 496 313 106 51 chr20 9865258 9865891 -62287991 + L1M4 LINE L1 2337 3004 -3142 31 0 0 0 chr20 9865891 9865922 -62287960 + AT_rich Low_complexity Low_complexity 1 31 0 28 48 0 0 chr20 9865977 9866019 -62287863 + AT_rich Low_complexity Low_complexity 1 42 0 501 288 16 0 chr20 9866385 9866510 -62287372 + MER63A DNA MER1_type 59 185 -25 255 122 0 0 chr20 9866577 9866626 -62287256 + (GGGA)n Simple_repeat Simple_repeat 2 50 0 930 62 78 0 chr20 9867121 9867250 -62286632 - MER85 DNA T2_type 0 139 1 204 167 24 0 chr20 9867462 9867504 -62286378 + (TA)n Simple_repeat Simple_repeat 2 44 0 889 175 6 6 chr20 9868033 9868204 -62285678 - L1M2 LINE L1 -603 5709 5539 2267 98 21 3 chr20 9868204 9868530 -62285352 + L1MB1 LINE L1 5827 6168 0 7603 28 5 0 chr20 9868896 9870003 -62283879 + L1PA3 LINE L1 5045 6155 0 602 333 99 17 chr20 9870322 9870616 -62283266 + L2 LINE L2 2559 2876 -438 346 276 73 8 chr20 9870618 9870741 -62283141 + L2 LINE L2 3182 3312 -1 216 0 0 0 chr20 9870952 9870976 -62282906 + (CA)n Simple_repeat Simple_repeat 2 25 0 309 216 17 95 chr20 9870988 9871104 -62282778 - MIR SINE MIR -66 142 36 2183 109 6 31 chr20 9872541 9872862 -62281020 - AluSq SINE Alu 0 313 1 237 234 0 0 chr20 9873280 9873327 -62280555 - AluJ/monomer SINE Alu -250 53 7 1855 31 4 0 chr20 9874019 9874245 -62279637 - L1PA4 LINE L1 -3 6152 5926 21 36 0 0 chr20 9874708 9874736 -62279146 + AT_rich Low_complexity Low_complexity 1 28 0 245 349 129 8 chr20 9875289 9875421 -62278461 + MIR SINE MIR 5 152 -110 488 302 11 39 chr20 9875423 9875605 -62278277 + MIR SINE MIR 13 189 -73 4809 297 102 13 chr20 9875881 9876516 -62277366 - L2 LINE L2 0 3313 2736 2602 42 0 3 chr20 9876516 9876823 -62277059 + AluY SINE Alu 3 308 -3 4809 297 102 13 chr20 9876823 9878437 -62275445 - L2 LINE L2 -577 2736 863 1662 252 57 51 chr20 9878443 9878990 -62274892 - MLT1H1 LTR MaLR -2 591 3 368 283 6 127 chr20 9879001 9879174 -62274708 - L2 LINE L2 -3161 153 2 28 0 0 0 chr20 9879415 9879443 -62274439 + AT_rich Low_complexity Low_complexity 1 28 0 923 283 135 15 chr20 9879791 9880389 -62273493 - L1ME3A LINE L1 -266 5973 5306 1826 277 105 50 chr20 9880452 9882450 -62271432 - L1ME3A LINE L1 -1071 5144 3038 291 276 147 55 chr20 9882463 9882898 -62270984 - L1ME3A LINE L1 -3504 2711 2237 2481 118 8 14 chr20 9882967 9883332 -62270550 - THE1B LTR MaLR 0 364 2 569 323 102 32 chr20 9883742 9884185 -62269697 + LTR67 LTR ERVL 84 557 0 2210 105 7 0 chr20 9884322 9884618 -62269264 - AluY SINE Alu -13 298 1 673 219 86 48 chr20 9884792 9885002 -62268880 - MER20 DNA MER1_type -1 218 1 354 330 37 26 chr20 9885007 9885198 -62268684 - MER117 DNA MER1_type -3 194 2 260 55 73 0 chr20 9886655 9886710 -62267172 + (TA)n Simple_repeat Simple_repeat 2 60 0 333 0 0 0 chr20 9886713 9886750 -62267132 + (CA)n Simple_repeat Simple_repeat 2 38 0 1869 146 16 13 chr20 9887262 9887571 -62266311 + AluSg SINE Alu 1 310 0 1731 255 79 98 chr20 9888382 9890275 -62263607 - L1M4 LINE L1 -2066 4080 2223 308 246 45 36 chr20 9890282 9890392 -62263490 - L1ME3A LINE L1 -4109 2287 2177 49 84 0 0 chr20 9890766 9890885 -62262997 + AT_rich Low_complexity Low_complexity 1 119 0 307 289 92 52 chr20 9890949 9890996 -62262886 + L1M4 LINE L1 3898 3942 -2204 1110 220 37 71 chr20 9890996 9891374 -62262508 - MLT1A1 LTR MaLR 0 365 1 307 289 92 52 chr20 9891374 9891631 -62262251 + L1M4 LINE L1 3942 4214 -1932 1038 170 30 20 chr20 9891909 9892109 -62261773 + MSTB LTR MaLR 225 426 0 1020 330 25 19 chr20 9892110 9892626 -62261256 - HUERS-P1 LTR ERV1 -4033 3089 2571 2040 112 47 53 chr20 9892788 9893127 -62260755 - MER1B DNA MER1_type 0 337 1 673 343 43 56 chr20 9893866 9894700 -62259182 - HUERS-P1 LTR ERV1 -5384 1738 916 1354 274 24 64 chr20 9894890 9895605 -62258277 - HUERS-P1 LTR ERV1 -5068 1608 535 312 322 59 17 chr20 9895762 9895880 -62258002 - HUERS-P1 LTR ERV1 -6116 147 25 3498 150 25 33 chr20 9895908 9896516 -62257366 - LTR26 LTR ERV1 0 603 1 1373 191 10 58 chr20 9896746 9897055 -62256827 + AluJo SINE Alu 1 294 -18 2181 16 0 0 chr20 9897382 9897632 -62256250 + L1HS LINE L1 5902 6151 -4 1718 154 54 40 chr20 9897707 9898077 -62255805 - THE1C LTR MaLR 0 375 1 494 141 31 4 chr20 9898971 9899082 -62254800 + L1MA5A LINE L1 6187 6300 0 239 150 0 0 chr20 9899404 9899444 -62254438 + L1MC5 LINE L1 7173 7212 -749 728 186 28 7 chr20 9899475 9899620 -62254262 - MER3 DNA MER1_type -55 154 7 700 219 94 81 chr20 9899626 9900083 -62253799 + L1MC5 LINE L1 7331 7793 -168 197 348 76 8 chr20 9900914 9901032 -62252850 + MIR SINE MIR 20 145 -63 43 99 0 0 chr20 9901243 9901384 -62252498 + AT_rich Low_complexity Low_complexity 1 141 0 24 0 0 0 chr20 9902615 9902639 -62251243 + AT_rich Low_complexity Low_complexity 1 24 0 552 84 0 0 chr20 9903063 9903146 -62250736 + (TC)n Simple_repeat Simple_repeat 2 84 0 826 278 48 0 chr20 9903429 9903638 -62250244 - MER58A DNA MER1_type 0 224 6 495 218 50 122 chr20 9903649 9903952 -62249930 + LTR37B LTR ERV1 114 394 -74 311 313 35 28 chr20 9905528 9905672 -62248210 + MIR SINE MIR 52 196 -66 258 238 16 16 chr20 9906142 9906205 -62247677 + LTR67 LTR ERVL 488 550 -7 2384 75 0 3 chr20 9906301 9906593 -62247289 + AluY SINE Alu 3 293 -18 343 337 12 41 chr20 9906891 9907060 -62246822 + MER5B DNA MER1_type 10 173 -5 374 344 17 28 chr20 9907984 9908164 -62245718 - MER5A DNA MER1_type -8 181 4 428 277 14 35 chr20 9908578 9908719 -62245163 - MER5B DNA MER1_type 0 178 41 272 268 242 7 chr20 9908749 9908902 -62244980 - MER5A DNA MER1_type 0 189 1 * 305 303 53 13 chr20 9908902 9909047 -62244835 + MIR SINE MIR 30 180 -82 867 202 58 0 chr20 9909281 9909454 -62244428 - MER5A DNA MER1_type -6 183 1 287 424 32 0 chr20 9909741 9909866 -62244016 - L2 LINE L2 -28 3244 3116 2693 125 38 20 chr20 9912298 9912747 -62241135 + LTR32 LTR ERVL 15 471 0 421 258 129 26 chr20 9913418 9913573 -62240309 + MER5B DNA MER1_type 2 172 -6 960 201 5 31 chr20 9913588 9913782 -62240100 - MER5A DNA MER1_type 0 189 1 1171 288 57 2 chr20 9914396 9914830 -62239052 + L1ME3 LINE L1 5638 6094 -68 285 211 87 124 chr20 9915071 9915232 -62238650 + HAL1 LINE L1 43 197 -2310 554 319 50 38 chr20 9915390 9915869 -62238013 + HAL1 LINE L1 611 1095 -1412 510 323 65 32 chr20 9916059 9916307 -62237575 + HAL1 LINE L1 1161 1416 -1091 1246 280 77 49 chr20 9916332 9917047 -62236835 + L1M4 LINE L1 15 749 -5793 200 128 0 26 chr20 9917167 9917206 -62236676 + (TAAAAA)n Simple_repeat Simple_repeat 2 39 0 191 149 0 21 chr20 9917212 9917259 -62236623 + (TTAAA)n Simple_repeat Simple_repeat 4 49 0 2322 273 110 23 chr20 9917273 9917809 -62236073 + L1M4 LINE L1 1164 1652 -4994 243 0 0 0 chr20 9917809 9917836 -62236046 + (CAA)n Simple_repeat Simple_repeat 1 27 0 2322 273 110 23 chr20 9917836 9918723 -62235159 + L1M4 LINE L1 1652 2711 -3935 1218 294 140 12 chr20 9919499 9920013 -62233869 + MLT1G LTR MaLR 9 588 -2 262 248 69 99 chr20 9920672 9920773 -62233109 + L2 LINE L2 3199 3296 -17 775 296 136 19 chr20 9920955 9921213 -62232669 + LTR16A LTR ERVL 18 331 -119 2699 153 5 9 chr20 9921213 9921643 -62232239 - MSTC LTR MaLR 0 428 1 775 296 136 19 chr20 9921643 9921745 -62232137 + LTR16A LTR ERVL 331 420 -30 270 0 0 0 chr20 9921807 9921837 -62232045 + (CA)n Simple_repeat Simple_repeat 1 30 0 680 274 129 30 chr20 9923845 9924318 -62229564 + MLT1H LTR MaLR 28 542 0 608 200 236 71 chr20 9924771 9925051 -62228831 + MER46C DNA MER2_type 9 334 -4 1280 97 36 109 chr20 9925880 9926128 -62227754 + MER30 DNA MER1_type 1 230 0 264 233 56 33 chr20 9926262 9926352 -62227530 + LTR67 LTR ERVL 446 537 -20 390 205 90 57 chr20 9926652 9926774 -62227108 - MLT1I LTR MaLR -9 400 275 240 35 0 0 chr20 9927161 9927190 -62226692 + (CA)n Simple_repeat Simple_repeat 2 30 0 8966 111 11 2 chr20 9927587 9928839 -62225043 + THE1B-int LTR MaLR 318 1580 0 2389 100 30 46 chr20 9928839 9929209 -62224673 + THE1B LTR MaLR 1 364 0 536 255 11 100 chr20 9929254 9929525 -62224357 + L1M4 LINE L1 4501 4747 -1399 2032 217 73 26 chr20 9929543 9930524 -62223358 + L1MB5 LINE L1 4637 5646 -528 2738 136 7 7 chr20 9930524 9930952 -62222930 + MSTA LTR MaLR 1 428 0 500 149 11 0 chr20 9930953 9931040 -62222842 + MSTA-int LTR MaLR 2 89 -1562 472 127 0 0 chr20 9931040 9931111 -62222771 + MSTA LTR MaLR 358 428 0 2409 198 19 13 chr20 9931111 9931595 -62222287 + L1MB5 LINE L1 5642 6131 -43 1963 153 0 0 chr20 9931595 9931882 -62222000 - AluSx SINE Alu -21 291 5 2409 198 19 13 chr20 9931882 9931927 -62221955 + L1MB5 LINE L1 6131 6174 0 7150 235 71 33 chr20 9932347 9933520 -62220362 - L1MD1 LINE L1 -7 6235 5108 1701 151 25 7 chr20 9933520 9933805 -62220077 + AluJb SINE Alu 1 290 -22 7150 235 71 33 chr20 9933805 9934591 -62219291 - L1MD1 LINE L1 -1134 5108 4353 2058 150 0 0 chr20 9934591 9934897 -62218985 - AluSx SINE Alu -4 308 3 7150 235 71 33 chr20 9934897 9936701 -62217181 - L1MD1 LINE L1 -1889 4353 2327 1065 83 0 0 chr20 9936710 9936854 -62217028 + L1PB1 LINE L1 5641 5784 -367 396 0 0 0 chr20 9936862 9936906 -62216976 + (TA)n Simple_repeat Simple_repeat 2 45 0 668 67 19 19 chr20 9936907 9937011 -62216871 + AluY SINE Alu 208 311 0 339 191 0 0 chr20 9937127 9937195 -62216687 + (TA)n Simple_repeat Simple_repeat 1 68 0 1689 149 100 7 chr20 9937195 9937504 -62216378 + L1PB1 LINE L1 5782 6119 -32 22 0 0 0 chr20 9937510 9937532 -62216350 + AT_rich Low_complexity Low_complexity 1 22 0 2230 192 92 29 chr20 9937537 9938046 -62215836 + L1MC1 LINE L1 1881 2483 -4097 1525 60 20 0 chr20 9938046 9938247 -62215635 + L1PA4 LINE L1 5949 6153 -2 2230 192 92 29 chr20 9938247 9938406 -62215476 + L1MC1 LINE L1 2483 2631 -3949 1375 228 148 27 chr20 9938447 9938608 -62215274 + L1MC1 LINE L1 4434 4574 -1852 2350 73 7 0 chr20 9938608 9938930 -62214952 + AluY SINE Alu 1 311 0 1375 228 148 27 chr20 9938930 9939390 -62214492 + L1MC1 LINE L1 4574 5130 -1296 1968 67 0 52 chr20 9939390 9939657 -62214225 + AluY SINE Alu 36 288 -23 302 222 0 0 chr20 9939658 9939721 -62214161 + L1MC4 LINE L1 6640 6702 -1340 258 156 0 0 chr20 9939723 9939768 -62214114 + (TATATG)n Simple_repeat Simple_repeat 2 46 0 5946 185 18 12 chr20 9939768 9941257 -62212625 + L1MC1 LINE L1 5116 6613 0 523 274 70 32 chr20 9941709 9941895 -62211987 - MIR SINE MIR 0 262 70 1272 262 78 47 chr20 9941916 9942252 -62211630 + L1MC4 LINE L1 7415 7772 -270 2100 115 14 0 chr20 9942252 9942547 -62211335 - AluSx SINE Alu -13 299 1 1272 262 78 47 chr20 9942547 9942699 -62211183 + L1MC4 LINE L1 7772 7918 -124 2088 128 6 9 chr20 9942815 9943150 -62210732 - L1PA16 LINE L1 -6 6160 5827 237 309 124 0 chr20 9945525 9945622 -62208260 - MIR SINE MIR -114 148 40 2253 85 0 0 chr20 9945627 9945931 -62207951 - AluY SINE Alu 0 304 1 38 51 0 0 chr20 9946006 9946065 -62207817 + AT_rich Low_complexity Low_complexity 1 59 0 187 359 54 0 chr20 9946330 9946422 -62207460 - MIR SINE MIR -61 147 51 1875 152 14 3 chr20 9946824 9947113 -62206769 - AluJb SINE Alu -20 292 1 338 303 241 40 chr20 9947115 9947439 -62206443 - L2 LINE L2 0 3313 2925 1566 305 62 25 chr20 9947492 9948142 -62205740 - L2 LINE L2 -453 2861 2188 331 255 114 7 chr20 9949000 9949149 -62204733 - L1ME4a LINE L1 -1 6120 5956 227 333 0 0 chr20 9949251 9949317 -62204565 - MER2 DNA MER2_type -279 66 1 773 274 161 15 chr20 9949533 9949862 -62204020 + LTR16A1 LTR ERVL 17 393 -64 * 895 303 35 21 chr20 9949858 9950148 -62203734 - MLT1H LTR MaLR -224 325 32 745 142 0 17 chr20 9950168 9950288 -62203594 + FLAM_C SINE Alu 1 118 -15 703 271 29 14 chr20 9950421 9950628 -62203254 + MIR SINE MIR 49 258 -4 360 319 136 44 chr20 9951176 9951543 -62202339 + L3b LINE CR1 1177 1577 -6 398 317 166 34 chr20 9952318 9952536 -62201346 + L3 LINE CR1 792 980 -597 1735 184 19 19 chr20 9952536 9952901 -62200981 + MLT1A1 LTR MaLR 1 365 0 398 317 166 34 chr20 9952901 9953032 -62200850 + L3 LINE CR1 980 1187 -390 207 265 59 0 chr20 9953653 9953730 -62200152 - MIR SINE MIR -73 135 55 199 191 48 0 chr20 9953719 9953761 -62200121 + L2 LINE L2 3270 3313 0 * 265 182 23 0 chr20 9953795 9953839 -62200043 + MER4E LTR ERV1 652 696 -70 303 345 35 0 chr20 9954246 9954359 -62199523 - L2 LINE L2 -290 2982 2866 3759 121 279 78 chr20 9954383 9955673 -62198209 - pTR5 LTR ERV1 0 2438 743 375 371 113 9 chr20 9955673 9956018 -62197864 - L2 LINE L2 -465 2849 2469 533 306 42 49 chr20 9956049 9956356 -62197526 + MLT1J LTR MaLR 2 306 -205 521 336 88 4 chr20 9956457 9956683 -62197199 - L2 LINE L2 -870 2444 2200 800 242 87 10 chr20 9956699 9956988 -62196894 + L1M4 LINE L1 4572 4882 -1264 532 216 28 28 chr20 9956992 9957168 -62196714 + L1M4 LINE L1 4978 5153 -993 605 121 250 8 chr20 9957169 9957343 -62196539 + L1M4 LINE L1 5230 5441 -737 500 163 10 0 chr20 9957343 9957441 -62196441 + L1MA6 LINE L1 6202 6300 0 3194 100 4 18 chr20 9957470 9957961 -62195921 - L1MA2 LINE L1 0 6304 5821 1221 102 0 0 chr20 9957972 9958138 -62195744 - L1PA7 LINE L1 -8 6146 5981 1979 201 98 19 chr20 9958138 9958610 -62195272 + LTR22 LTR ERVK 1 509 0 30811 99 8 14 chr20 9958611 9962315 -62191567 - L1PA7 LINE L1 -166 6303 2620 2281 96 0 3 chr20 9962315 9962608 -62191274 - AluY SINE Alu -8 303 12 30811 99 8 14 chr20 9962608 9964540 -62189342 - L1PA7 LINE L1 -3849 2620 679 396 234 2 3 chr20 9964538 9964651 -62189231 - L1M4 LINE L1 -726 5442 5331 * 1318 273 53 31 chr20 9964691 9965234 -62188648 + L1M4 LINE L1 3519 4073 -2073 * 3729 83 0 6 chr20 9965232 9965727 -62188155 - L1P3 LINE L1 -5130 1331 840 1851 124 0 0 chr20 9965719 9966010 -62187872 - L1M1 LINE L1 -532 5772 5482 * 3261 171 11 43 chr20 9966011 9966772 -62187110 + L1MB7 LINE L1 5428 6163 -21 2049 135 16 0 chr20 9966774 9967078 -62186804 - AluSx SINE Alu -3 309 1 748 226 42 6 chr20 9967709 9967877 -62186005 - MER5A DNA MER1_type -8 181 8 25 51 0 0 chr20 9968383 9968422 -62185460 + AT_rich Low_complexity Low_complexity 1 39 0 206 241 56 0 chr20 9968520 9968574 -62185308 + GA-rich Low_complexity Low_complexity 4 60 0 288 239 120 11 chr20 9968662 9968754 -62185128 - MER5A DNA MER1_type -77 112 11 227 289 0 0 chr20 9968984 9969036 -62184846 - L2 LINE L2 0 3272 3221 2284 72 0 27 chr20 9969339 9969631 -62184251 - AluY SINE Alu 0 311 28 22 94 0 0 chr20 9969858 9969922 -62183960 + AT_rich Low_complexity Low_complexity 1 64 0 294 324 181 14 chr20 9970152 9970362 -62183520 - L2 LINE L2 -45 3268 3024 234 105 0 0 chr20 9970368 9970406 -62183476 + (TG)n Simple_repeat Simple_repeat 1 38 0 29 0 0 0 chr20 9970410 9970439 -62183443 + AT_rich Low_complexity Low_complexity 1 29 0 1949 202 55 0 chr20 9970461 9970843 -62183039 - MLT2C2 LTR ERVL -61 403 1 187 361 204 24 chr20 9971045 9971950 -62181932 - L2 LINE L2 -1916 1398 331 29 0 0 0 chr20 9972283 9972312 -62181570 + AT_rich Low_complexity Low_complexity 1 29 0 201 196 0 0 chr20 9973156 9973207 -62180675 + (TA)n Simple_repeat Simple_repeat 2 52 0 325 174 165 41 chr20 9973930 9974051 -62179831 + L1ME4a LINE L1 5308 5443 -2599 282 157 0 20 chr20 9974184 9974235 -62179647 - L2 LINE L2 -1 3312 3263 213 132 26 0 chr20 9974203 9974241 -62179641 - MIR SINE MIR -13 249 211 * 372 220 0 11 chr20 9974557 9974648 -62179234 - MLT1I LTR MaLR 0 409 320 270 136 0 0 chr20 9974649 9974693 -62179189 + (TCCC)n Simple_repeat Simple_repeat 3 46 0 2068 157 0 3 chr20 9974693 9974999 -62178883 - AluSx SINE Alu -7 305 1 2602 143 11 0 chr20 9975157 9975598 -62178284 + L1MA2 LINE L1 5857 6302 -2 320 285 73 95 chr20 9975808 9976261 -62177621 + L1ME4a LINE L1 5630 6072 -49 26 30 0 0 chr20 9977430 9977463 -62176419 + AT_rich Low_complexity Low_complexity 1 33 0 2352 85 0 7 chr20 9978010 9978305 -62175577 + AluY SINE Alu 10 302 -9 616 292 121 48 chr20 9979098 9979642 -62174240 + MLT1G LTR MaLR 1 584 -6 1417 332 143 38 chr20 9979693 9980786 -62173096 - L3 LINE CR1 -118 1459 252 182 256 148 57 chr20 9980992 9981168 -62172714 + L2 LINE L2 3097 3288 -25 238 232 0 61 chr20 9981438 9981520 -62172362 - LTR16C LTR ERVL -50 441 365 266 267 0 17 chr20 9982713 9982773 -62171109 + L2 LINE L2 3246 3304 -9 1759 72 0 4 chr20 9984344 9984580 -62169302 - LTR12 LTR ERV1 0 714 480 280 258 21 0 chr20 9984581 9984678 -62169204 - LTR30 LTR ERV1 -80 642 544 997 72 158 0 chr20 9984678 9984830 -62169052 - LTR12 LTR ERV1 -437 277 102 * 5705 106 31 0 chr20 9984825 9985691 -62168191 - HERV9 LTR ERV1 -7506 893 1 5538 81 94 3 chr20 9985691 9986448 -62167434 - LTR12 LTR ERV1 0 826 1 534 214 86 0 chr20 9987261 9987401 -62166481 - MER3 DNA MER1_type -57 152 1 1779 226 108 22 chr20 9987651 9988142 -62165740 - MLT1F LTR MaLR -8 534 2 608 265 24 29 chr20 9988412 9988582 -62165300 - MER5B DNA MER1_type -7 171 3 420 257 230 7 chr20 9989318 9989470 -62164412 - MER5A DNA MER1_type 0 189 4 340 365 14 14 chr20 9991084 9991232 -62162650 + MIR3 SINE MIR 33 180 -28 2520 49 0 10 chr20 9991261 9991565 -62162317 - AluY SINE Alu -10 301 1 2789 164 138 18 chr20 9994141 9994769 -62159113 + MER39 LTR ERV1 1 704 -3 2125 166 53 33 chr20 9997017 9997469 -62156413 - LTR32 LTR ERVL 0 471 11 853 274 62 19 chr20 9997675 9997919 -62155963 - L1MEc LINE L1 -6026 370 106 1981 116 0 34 chr20 9997919 9998243 -62155639 - AluSx SINE Alu 0 315 2 853 274 62 19 chr20 9998243 9998318 -62155564 - L1MEc LINE L1 -6290 106 36 416 194 143 0 chr20 9998524 9998622 -62155260 - MLT1H LTR MaLR 0 467 356 276 241 0 65 chr20 9999398 9999506 -62154376 + LTR67 LTR ERVL 457 557 0 369 0 0 0 chr20 9999773 9999814 -62154068 + (TG)n Simple_repeat Simple_repeat 1 41 0 184 239 22 0 chr20 9999888 9999934 -62153948 - MIR3 SINE MIR -50 158 112 217 333 0 26 chr20 10000817 10000931 -62152951 + GA-rich Low_complexity Low_complexity 2 112 0 250 213 16 0 chr20 10001698 10001759 -62152123 + LTR37A LTR ERV1 111 172 -254 2172 96 17 7 chr20 10001819 10002121 -62151761 + AluSq SINE Alu 1 305 -8 615 98 0 74 chr20 10002122 10002244 -62151638 + LTR37A LTR ERV1 314 426 0 207 250 0 44 chr20 10002469 10002537 -62151345 + (CATA)n Simple_repeat Simple_repeat 3 67 0 648 227 162 0 chr20 10006348 10006546 -62147336 - MLT1H LTR MaLR -206 343 114 416 289 107 93 chr20 10007271 10007409 -62146473 + MLT1J2 LTR MaLR 6 141 -309 1028 228 27 5 chr20 10007409 10007628 -62146254 + MER58A DNA MER1_type 1 224 0 416 289 107 93 chr20 10007628 10007928 -62145954 + MLT1J2 LTR MaLR 141 450 0 204 333 0 0 chr20 10008730 10008790 -62145092 + L2 LINE L2 3249 3308 -5 1763 308 76 17 chr20 10009051 10010006 -62143876 - L2 LINE L2 0 3313 2304 308 127 0 79 chr20 10011198 10011324 -62142558 + (GGAAA)n Simple_repeat Simple_repeat 5 120 0 252 307 23 0 chr20 10011328 10011416 -62142466 - MIR3 SINE MIR -34 174 85 388 238 64 89 chr20 10011515 10011750 -62142132 + L1ME LINE L1 4795 5023 -1123 2176 86 0 0 chr20 10011769 10012061 -62141821 + L1PA7 LINE L1 5859 6150 -4 517 253 12 37 chr20 10012061 10012194 -62141688 + L1ME LINE L1 5555 5685 -479 1706 183 23 0 chr20 10012194 10012495 -62141387 + AluJo SINE Alu 1 308 -4 517 253 12 37 chr20 10012495 10012523 -62141359 + L1ME LINE L1 5685 5712 -452 1480 214 7 10 chr20 10012870 10013159 -62140723 + AluJo SINE Alu 1 288 -24 299 329 19 93 chr20 10013593 10013809 -62140073 - L2 LINE L2 0 3272 3073 217 186 0 0 chr20 10014480 10014523 -62139359 - L2 LINE L2 0 3313 3271 287 250 0 13 chr20 10014872 10014959 -62138923 + L1PA16 LINE L1 4812 4897 -1249 * 4401 157 9 4 chr20 10014957 10015734 -62138148 + L1PA16 LINE L1 5284 6064 -102 371 252 78 0 chr20 10016883 10016986 -62136896 + MER81 DNA DNA 2 112 -2 27 0 0 0 chr20 10017740 10017767 -62136115 + AT_rich Low_complexity Low_complexity 1 27 0 23 68 0 0 chr20 10019226 10019270 -62134612 + AT_rich Low_complexity Low_complexity 1 44 0 342 297 31 16 chr20 10020521 10020649 -62133233 + MER94 DNA DNA 5 134 0 317 261 80 0 chr20 10021466 10021554 -62132328 + MIR3 SINE MIR 62 156 -52 2120 105 18 3 chr20 10022052 10022337 -62131545 - AluSc SINE Alu -20 289 1 262 349 138 0 chr20 10023624 10023733 -62130149 - L2 LINE L2 0 3272 3149 206 318 236 7 chr20 10023882 10024030 -62129852 - L3 LINE CR1 -401 1176 995 27 62 0 0 chr20 10024754 10024802 -62129080 + AT_rich Low_complexity Low_complexity 1 48 0 2174 124 48 20 chr20 10025796 10026150 -62127732 + THE1B LTR MaLR 1 364 0 3308 114 9 5 chr20 10026150 10026703 -62127179 + L1MA2 LINE L1 5641 6195 -109 27 0 0 0 chr20 10027445 10027472 -62126410 + AT_rich Low_complexity Low_complexity 1 27 0 829 195 100 0 chr20 10027726 10027916 -62125966 - MER3 DNA MER1_type 0 209 1 888 235 112 104 chr20 10028187 10028647 -62125235 + HAL1b LINE L1 317 772 -576 273 57 0 0 chr20 10028647 10028682 -62125200 + (TA)n Simple_repeat Simple_repeat 2 36 0 2425 81 0 0 chr20 10028682 10028979 -62124903 - AluY SINE Alu -14 297 1 2085 135 0 7 chr20 10028987 10029275 -62124607 + AluSx SINE Alu 4 289 -23 888 235 112 104 chr20 10029275 10029643 -62124239 + HAL1b LINE L1 778 1165 -183 3360 154 66 46 chr20 10029643 10030356 -62123526 - LTR8A LTR ERV1 0 727 1 888 235 112 104 chr20 10030356 10030483 -62123399 + HAL1b LINE L1 1165 1290 -58 27 49 0 0 chr20 10030560 10030601 -62123281 + AT_rich Low_complexity Low_complexity 1 41 0 199 272 112 48 chr20 10030659 10030784 -62123098 - MIR SINE MIR -82 180 48 378 263 118 7 chr20 10032024 10032176 -62121706 + Charlie8 DNA MER1_type 10 178 -2239 1063 225 131 0 chr20 10032205 10032525 -62121357 + L1ME3 LINE L1 5721 6082 -80 355 200 56 11 chr20 10032717 10032807 -62121075 + MER5A DNA MER1_type 96 189 0 23 54 0 0 chr20 10033686 10033723 -62120159 + AT_rich Low_complexity Low_complexity 1 37 0 930 263 12 16 chr20 10033883 10034134 -62119748 + MER45C DNA AcHobo 8 257 -696 788 237 163 0 chr20 10034206 10034421 -62119461 + MER45C DNA AcHobo 704 953 0 2363 269 47 30 chr20 10035805 10036832 -62117050 - L2 LINE L2 0 3313 2277 2088 116 0 0 chr20 10037767 10038042 -62115840 - AluSx SINE Alu -14 298 24 307 325 32 16 chr20 10038364 10038490 -62115392 + MLT1H LTR MaLR 130 257 -292 180 295 0 64 chr20 10039763 10039841 -62114041 - L2 LINE L2 0 3272 3200 1340 221 147 12 chr20 10040341 10040743 -62113139 + MLT1H LTR MaLR 94 549 0 459 96 96 0 chr20 10041280 10041353 -62112529 - MADE1 DNA Mariner 0 80 1 2120 130 0 0 chr20 10041793 10042105 -62111777 - AluSq SINE Alu 0 312 1 21 0 0 0 chr20 10042124 10042145 -62111737 + AT_rich Low_complexity Low_complexity 1 21 0 5714 135 9 1 chr20 10042145 10043272 -62110610 - L1PB1 LINE L1 -3 6148 5015 2057 128 3 3 chr20 10043670 10043968 -62109914 - AluSx SINE Alu -6 306 9 222 37 0 0 chr20 10044340 10044367 -62109515 + (TAGA)n Simple_repeat Simple_repeat 1 27 0 201 158 18 35 chr20 10044367 10044424 -62109458 + (TA)n Simple_repeat Simple_repeat 1 56 0 3638 130 20 74 chr20 10044774 10045504 -62108378 + LTR8 LTR ERV1 1 691 0 606 174 58 58 chr20 10045995 10046150 -62107732 - MER5B DNA MER1_type -11 167 13 2097 91 0 82 chr20 10047357 10047676 -62106206 + AluSg SINE Alu 1 293 -17 22 0 0 0 chr20 10048041 10048063 -62105819 + AT_rich Low_complexity Low_complexity 1 22 0 704 158 0 0 chr20 10048185 10048299 -62105583 + MLT1A2 LTR MaLR 1 114 -260 554 297 162 14 chr20 10048428 10048866 -62105016 - HAL1 LINE L1 -607 1900 1398 322 267 59 55 chr20 10048933 10049188 -62104694 - HAL1 LINE L1 -1220 1287 1032 372 360 97 8 chr20 10049203 10049461 -62104421 - HAL1 LINE L1 -1424 1083 803 586 197 27 20 chr20 10050190 10050337 -62103545 + MER3 DNA MER1_type 13 160 -49 712 267 87 5 chr20 10050740 10050946 -62102936 + MIR SINE MIR 40 262 0 395 147 0 0 chr20 10051766 10051834 -62102048 + Tigger1 DNA MER2_type 1 68 -2350 926 113 7 0 chr20 10051836 10051977 -62101905 + Tigger1 DNA MER2_type 2110 2251 -167 13081 121 66 16 chr20 10051988 10054221 -62099661 + Tigger1 DNA MER2_type 74 2418 0 804 173 0 0 chr20 10055037 10055270 -62098612 + (TGG)n Simple_repeat Simple_repeat 1 233 0 746 188 0 6 chr20 10055310 10055491 -62098391 + (TGG)n Simple_repeat Simple_repeat 1 180 0 361 292 90 39 chr20 10055804 10056037 -62097845 + L2 LINE L2 2553 2797 -517 24 32 0 0 chr20 10056299 10056330 -62097552 + AT_rich Low_complexity Low_complexity 1 31 0 297 151 0 0 chr20 10056355 10056408 -62097474 + (TGAA)n Simple_repeat Simple_repeat 2 54 0 705 144 0 0 chr20 10056642 10056760 -62097122 + L1MA5A LINE L1 6177 6294 -3 262 311 19 66 chr20 10058414 10058520 -62095362 - MIR3 SINE MIR -95 113 13 984 256 29 4 chr20 10058925 10059198 -62094684 + LTR16C LTR ERVL 212 491 0 2201 99 10 7 chr20 10059699 10060001 -62093881 + AluSx SINE Alu 1 303 -9 375 23 0 0 chr20 10060952 10060996 -62092886 + (TA)n Simple_repeat Simple_repeat 2 45 0 290 211 0 0 chr20 10061590 10061642 -62092240 + MIR SINE MIR 49 100 -162 342 280 60 10 chr20 10061668 10061768 -62092114 - L2 LINE L2 -4 3309 3205 1642 209 106 5 chr20 10061981 10062369 -62091513 - MLT1D LTR MaLR -52 453 27 527 289 71 16 chr20 10062572 10062888 -62090994 - L2 LINE L2 -297 3016 2686 221 375 17 25 chr20 10065610 10065730 -62088152 - MIR3 SINE MIR -78 130 12 2185 110 0 3 chr20 10066429 10066721 -62087161 + AluSq SINE Alu 2 292 -21 1179 167 21 177 chr20 10066730 10067149 -62086733 + MLT2D LTR ERVL 1 354 -60 256 143 0 0 chr20 10067264 10067306 -62086576 + MLT2D LTR ERVL 423 464 0 21 82 0 0 chr20 10067854 10067903 -62085979 + AT_rich Low_complexity Low_complexity 1 49 0 775 164 132 19 chr20 10068061 10068220 -62085662 - MER5A DNA MER1_type -3 186 10 185 262 107 60 chr20 10068361 10068445 -62085437 - L3 LINE CR1 -9 1568 1481 2110 152 0 0 chr20 10068649 10068952 -62084930 + AluSx SINE Alu 1 303 -9 222 385 0 0 chr20 10069271 10069336 -62084546 + MER91 DNA MER1_type 132 196 0 22 0 0 0 chr20 10071462 10071484 -62082398 + AT_rich Low_complexity Low_complexity 1 22 0 3030 166 81 25 chr20 10071484 10071607 -62082275 - L1MA7 LINE L1 -1 6290 6175 1814 154 44 68 chr20 10071607 10071991 -62081891 + THE1C LTR MaLR 1 375 0 3030 166 81 25 chr20 10071991 10072534 -62081348 - L1MA7 LINE L1 -116 6175 5587 1708 129 6 79 chr20 10072530 10072724 -62081158 + L1M2 LINE L1 5141 5348 -943 * 5152 152 9 6 chr20 10072724 10073718 -62080164 + L1PA16 LINE L1 5170 6166 0 1708 129 6 79 chr20 10073718 10074003 -62079879 + L1M2 LINE L1 5348 5592 -699 585 179 28 0 chr20 10075330 10075436 -62078446 - MER5A DNA MER1_type -77 112 4 306 0 0 0 chr20 10075786 10075820 -62078062 + (TTG)n Simple_repeat Simple_repeat 2 35 0 21 0 0 0 chr20 10075886 10075907 -62077975 + AT_rich Low_complexity Low_complexity 1 21 0 186 71 0 0 chr20 10077641 10077669 -62076213 + (TG)n Simple_repeat Simple_repeat 1 28 0 299 315 163 5 chr20 10077743 10077927 -62075955 + MIR SINE MIR 30 242 -20 23 54 0 0 chr20 10078952 10078989 -62074893 + AT_rich Low_complexity Low_complexity 1 37 0 281 283 74 66 chr20 10079445 10079642 -62074240 + MIR SINE MIR 64 261 -1 190 391 11 0 chr20 10080247 10080339 -62073543 - MIR3 SINE MIR -49 159 67 648 261 54 71 chr20 10080352 10080632 -62073250 + Charlie8 DNA MER1_type 1 275 -2142 356 0 23 0 chr20 10080646 10080690 -62073192 + (TTTG)n Simple_repeat Simple_repeat 2 46 0 286 180 16 0 chr20 10081026 10081087 -62072795 + MER53 DNA DNA 127 188 -1 2114 103 3 3 chr20 10081179 10081461 -62072421 + AluSc SINE Alu 5 286 -23 651 294 63 18 chr20 10082070 10082356 -62071526 - LTR16C LTR ERVL 0 491 193 821 291 8 8 chr20 10082984 10083228 -62070654 + MIR SINE MIR 9 252 -10 2033 119 52 35 chr20 10083540 10083909 -62069973 + THE1C LTR MaLR 1 375 0 437 270 37 37 chr20 10084297 10084593 -62069289 - L1ME LINE L1 -335 5786 5491 357 246 9 0 chr20 10084637 10084751 -62069131 - L1P5 LINE L1 -722 5434 5320 250 242 106 0 chr20 10085649 10085715 -62068167 + MIR SINE MIR 58 130 -78 795 241 80 5 chr20 10085741 10085965 -62067917 - MIR SINE MIR -4 258 18 25 0 0 0 chr20 10086231 10086256 -62067626 + AT_rich Low_complexity Low_complexity 1 25 0 1775 249 16 18 chr20 10086440 10086954 -62066928 - L1ME1 LINE L1 -5 6161 5649 396 0 0 0 chr20 10088095 10088139 -62065743 + (TG)n Simple_repeat Simple_repeat 2 45 0 183 80 0 0 chr20 10088140 10088165 -62065717 + (CG)n Simple_repeat Simple_repeat 2 26 0 346 235 82 20 chr20 10090335 10090433 -62063449 + L2 LINE L2 3187 3290 -23 1628 232 22 56 chr20 10092644 10092865 -62061017 - L1MA9 LINE L1 -38 6274 6047 1739 110 158 14 chr20 10092865 10093156 -62060726 + MER1B DNA MER1_type 1 333 -4 1628 232 22 56 chr20 10093156 10093490 -62060392 - L1MA9 LINE L1 -265 6047 5738 2136 128 3 13 chr20 10093499 10093804 -62060078 - AluSx SINE Alu -10 302 1 566 233 129 52 chr20 10094162 10094267 -62059615 + LTR16C LTR ERVL 242 337 -154 2369 93 0 0 chr20 10094267 10094568 -62059314 - AluSc SINE Alu -8 301 1 566 233 129 52 chr20 10094568 10094694 -62059188 + LTR16C LTR ERVL 337 491 0 2050 146 83 24 chr20 10094779 10095189 -62058693 + Tigger2a DNA MER2_type 1 434 0 864 186 81 0 chr20 10096321 10096493 -62057389 + MER5A DNA MER1_type 1 186 -3 13136 222 19 12 chr20 10096544 10098065 -62055817 - L1PA16 LINE L1 0 7604 6096 210 91 0 0 chr20 10098065 10098098 -62055784 + (TTG)n Simple_repeat Simple_repeat 2 34 0 13136 222 19 12 chr20 10098098 10101776 -62052106 - L1PA16 LINE L1 -1508 6096 2355 227 265 73 0 chr20 10101795 10101863 -62052019 - LTR9B LTR ERV1 -3 641 569 2294 105 3 10 chr20 10102400 10102713 -62051169 + AluSp SINE Alu 1 311 -2 37855 73 5 9 chr20 10103161 10107791 -62046091 - L1PA5 LINE L1 -34 6120 1515 7489 87 4 3 chr20 10107791 10108759 -62045123 + LTR5 LTR ERVK 1 969 0 37855 73 5 9 chr20 10108759 10110258 -62043624 - L1PA5 LINE L1 -4639 1515 12 257 313 12 0 chr20 10110521 10110601 -62043281 + CT-rich Low_complexity Low_complexity 2 82 0 1417 202 0 46 chr20 10110622 10110924 -62042958 - AluJo SINE Alu -20 292 5 189 279 0 0 chr20 10110949 10111028 -62042854 + CT-rich Low_complexity Low_complexity 3 81 0 203 0 37 0 chr20 10111104 10111131 -62042751 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 280 299 8 0 chr20 10111971 10112088 -62041794 - L1MEd LINE L1 -5947 172 55 439 279 92 71 chr20 10112360 10112654 -62041228 + MLT1I LTR MaLR 20 319 -90 1413 139 11 73 chr20 10113408 10113682 -62040200 - AluJo SINE Alu -13 299 43 28 48 0 0 chr20 10113702 10113744 -62040138 + AT_rich Low_complexity Low_complexity 1 42 0 2367 97 0 3 chr20 10114112 10114420 -62039462 + AluSx SINE Alu 1 307 -5 25 31 0 0 chr20 10115127 10115159 -62038723 + AT_rich Low_complexity Low_complexity 1 32 0 254 258 113 70 chr20 10115238 10115424 -62038458 + MLT1J LTR MaLR 224 417 -94 2325 66 31 0 chr20 10115467 10115754 -62038128 - AluY SINE Alu -15 296 1 229 203 81 0 chr20 10115853 10115927 -62037955 + (CATATA)n Simple_repeat Simple_repeat 2 81 0 569 143 0 0 chr20 10116217 10116301 -62037581 - AluJ/FLAM SINE Alu -228 84 1 695 165 0 0 chr20 10117090 10117199 -62036683 + FLAM_C SINE Alu 1 109 -34 2338 92 0 22 chr20 10117226 10117542 -62036340 + AluY SINE Alu 1 309 -2 28 0 0 0 chr20 10118306 10118334 -62035548 + AT_rich Low_complexity Low_complexity 1 28 0 697 155 14 40 chr20 10118566 10118714 -62035168 + LTR37A LTR ERV1 1 144 -282 400 344 26 10 chr20 10118764 10118956 -62034926 + L2 LINE L2 2423 2617 -697 845 214 0 40 chr20 10118986 10119187 -62034695 + AluJo SINE Alu 1 193 -119 1136 205 57 4 chr20 10119213 10119442 -62034440 + MLT1D LTR MaLR 261 501 -4 1763 167 44 26 chr20 10119502 10119843 -62034039 + MER7A DNA MER2_type 2 346 0 393 311 87 31 chr20 10119990 10120060 -62033822 - MER5B DNA MER1_type -6 172 107 355 279 133 6 chr20 10120060 10120104 -62033778 - MER45A DNA AcHobo -1403 178 141 1898 146 0 14 chr20 10120104 10120391 -62033491 + AluJo SINE Alu 2 284 -28 355 279 133 6 chr20 10120391 10120504 -62033378 - MER45A DNA AcHobo -1440 141 1 393 311 87 31 chr20 10120504 10120594 -62033288 - MER5B DNA MER1_type -71 107 3 1378 224 92 22 chr20 10120643 10121084 -62032798 - MER110A LTR ERV1 0 491 41 3573 173 46 10 chr20 10127144 10127857 -62026025 + L1MB7 LINE L1 5368 6106 -78 274 156 0 0 chr20 10127863 10127908 -62025974 - L1MB7 LINE L1 -71 6113 6069 245 217 38 57 chr20 10128005 10128111 -62025771 + Charlie7 DNA MER1_type 2490 2593 -19 255 254 30 37 chr20 10128602 10128736 -62025146 - Charlie7 DNA MER1_type 0 2612 2480 * 2183 233 80 9 chr20 10128734 10129271 -62024611 - MLT1G LTR MaLR -6 584 10 345 266 0 0 chr20 10130468 10130547 -62023335 + Charlie7 DNA MER1_type 25 103 -2509 264 219 29 29 chr20 10130552 10130657 -62023225 + Charlie7 DNA MER1_type 2476 2580 -32 432 353 79 5 chr20 10131062 10131252 -62022630 - MIR SINE MIR -39 223 20 217 277 62 0 chr20 10133052 10133117 -62020765 - MIR SINE MIR -12 250 182 300 200 0 0 chr20 10133338 10133403 -62020479 + (TG)n Simple_repeat Simple_repeat 2 66 0 212 359 10 19 chr20 10133963 10134066 -62019816 - L3b LINE CR1 -164 1419 1318 475 310 49 0 chr20 10134310 10134452 -62019430 + MIR SINE MIR 1 149 -113 9732 250 53 27 chr20 10134464 10140460 -62013422 + L1ME1 LINE L1 36 6183 -52 292 301 70 19 chr20 10140355 10140511 -62013371 + L1MA10 LINE L1 6238 6401 -2 * 215 319 59 25 chr20 10140515 10140634 -62013248 + MIR SINE MIR 137 259 -3 1125 234 57 95 chr20 10140976 10141399 -62012483 - LTR16C LTR ERVL 0 491 85 1171 248 95 66 chr20 10142321 10142838 -62011044 - MLT1F1 LTR MaLR 0 567 11 25 0 0 0 chr20 10143587 10143612 -62010270 + AT_rich Low_complexity Low_complexity 1 25 0 2185 116 0 0 chr20 10143810 10144104 -62009778 + AluSg SINE Alu 1 294 -16 413 221 9 71 chr20 10144262 10144375 -62009507 + L2 LINE L2 3207 3312 -1 21 0 0 0 chr20 10144424 10144445 -62009437 + AT_rich Low_complexity Low_complexity 1 21 0 295 251 105 23 chr20 10144520 10144691 -62009191 + L1ME LINE L1 4890 5074 -1072 518 279 75 47 chr20 10144971 10145290 -62008592 + L1ME LINE L1 5357 5684 -480 23 0 0 0 chr20 10145770 10145793 -62008089 + AT_rich Low_complexity Low_complexity 1 23 0 333 0 0 0 chr20 10146849 10146886 -62006996 + (TC)n Simple_repeat Simple_repeat 2 38 0 225 0 0 0 chr20 10147813 10147838 -62006044 + (TG)n Simple_repeat Simple_repeat 2 26 0 466 264 54 62 chr20 10149343 10149648 -62004234 + MLT1H LTR MaLR 202 626 0 36 53 0 0 chr20 10149962 10150019 -62003863 + AT_rich Low_complexity Low_complexity 1 57 0 25 65 0 0 chr20 10150079 10150125 -62003757 + AT_rich Low_complexity Low_complexity 1 46 0 218 104 104 0 chr20 10150132 10150180 -62003702 + A-rich Low_complexity Low_complexity 2 54 0 180 0 0 0 chr20 10150257 10150277 -62003605 + (TAA)n Simple_repeat Simple_repeat 2 21 0 33 85 0 0 chr20 10150301 10150383 -62003499 + AT_rich Low_complexity Low_complexity 1 82 0 774 324 88 9 chr20 10150478 10150944 -62002938 - L1ME LINE L1 -405 5765 5263 1210 246 77 31 chr20 10151033 10151534 -62002348 - MLT1E LTR MaLR -6 587 1 1828 145 20 30 chr20 10152018 10152322 -62001560 + AluSx SINE Alu 1 301 -11 255 286 84 24 chr20 10152330 10152617 -62001265 - L1ME LINE L1 -1460 4686 4383 404 310 49 27 chr20 10153870 10154054 -61999828 - MIR SINE MIR -74 188 1 25 51 0 0 chr20 10154198 10154237 -61999645 + AT_rich Low_complexity Low_complexity 1 39 0 855 287 93 35 chr20 10154714 10155373 -61998509 - L1M4 LINE L1 -1438 4708 4012 292 167 128 51 chr20 10155469 10155547 -61998335 - MER103 DNA DNA -45 121 38 855 265 22 101 chr20 10155995 10156231 -61997651 + LTR16A1 LTR ERVL 1 179 -278 207 0 0 0 chr20 10156231 10156254 -61997628 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 855 265 22 101 chr20 10156254 10156512 -61997370 + LTR16A1 LTR ERVL 179 456 -1 215 281 125 0 chr20 10157493 10157557 -61996325 + MIR SINE MIR 89 160 -102 1531 284 29 25 chr20 10158809 10159295 -61994587 - LTR16C LTR ERVL 0 491 4 231 302 174 20 chr20 10160284 10160433 -61993449 + MLT1H LTR MaLR 3 174 -375 343 285 95 6 chr20 10160541 10160699 -61993183 + MLT1H LTR MaLR 341 512 -37 23 86 0 0 chr20 10161417 10161475 -61992407 + AT_rich Low_complexity Low_complexity 1 58 0 339 202 21 64 chr20 10163862 10163956 -61989926 + L2 LINE L2 3224 3313 0 2200 248 92 20 chr20 10165322 10165367 -61988515 + L1ME3A LINE L1 5371 5411 -759 1997 130 27 0 chr20 10165367 10165668 -61988214 + AluSx SINE Alu 1 309 -3 2200 248 92 20 chr20 10165668 10166364 -61987518 + L1ME3A LINE L1 5411 6165 -5 917 290 56 72 chr20 10166550 10166801 -61987081 + L2 LINE L2 2819 3060 -253 5714 39 0 1 chr20 10166801 10167497 -61986385 + L1PA4 LINE L1 5461 6155 0 917 290 56 72 chr20 10167497 10167742 -61986140 + L2 LINE L2 3060 3307 -6 2196 80 3 3 chr20 10167957 10168269 -61985613 + L1PA8 LINE L1 5861 6172 0 1742 239 2 21 chr20 10169819 10170246 -61983636 + L1ME1 LINE L1 5734 6152 -14 3526 79 6 4 chr20 10170339 10170822 -61983060 + L1PA8 LINE L1 5688 6171 -1 302 196 6 184 chr20 10171200 10171236 -61982646 + L1MC4 LINE L1 7541 7582 -460 2063 224 83 41 chr20 10171236 10171802 -61982080 + MLT1G LTR MaLR 1 590 0 302 196 6 184 chr20 10171802 10171923 -61981959 + L1MC4 LINE L1 7582 7670 -372 457 276 120 51 chr20 10172041 10172258 -61981624 + MIR SINE MIR 21 252 -10 380 279 125 16 chr20 10173252 10173622 -61980260 - L1ME LINE L1 -496 5625 5237 2024 141 3 0 chr20 10174566 10174865 -61979017 + AluSx SINE Alu 1 300 -12 1196 251 21 12 chr20 10175176 10175503 -61978379 + LTR16A LTR ERVL 121 450 0 391 318 127 31 chr20 10175698 10176381 -61977501 - L1ME LINE L1 -1371 4775 4027 1613 108 100 4 chr20 10176715 10176965 -61976917 + AluSc SINE Alu 1 274 -35 514 274 79 32 chr20 10177475 10177507 -61976375 - L1ME LINE L1 -402 5760 5731 923 169 75 203 chr20 10177507 10178038 -61975844 - MER4C LTR ERV1 -1 464 2 514 274 79 32 chr20 10178038 10178195 -61975687 - L1ME LINE L1 -431 5731 5562 21 36 0 0 chr20 10178217 10178245 -61975637 + AT_rich Low_complexity Low_complexity 1 28 0 645 233 158 16 chr20 10179200 10179453 -61974429 - LTR50 LTR ERVL -124 671 383 253 262 0 0 chr20 10180008 10180069 -61973813 - L2 LINE L2 0 3313 3253 21 82 0 0 chr20 10180190 10180239 -61973643 + AT_rich Low_complexity Low_complexity 1 49 0 189 115 33 33 chr20 10180243 10180304 -61973578 + (TTA)n Simple_repeat Simple_repeat 2 62 0 1719 160 7 7 chr20 10180309 10180590 -61973292 - AluJo SINE Alu -30 282 2 232 186 0 68 chr20 10182181 10182240 -61971642 - L1M1 LINE L1 -766 5536 5482 231 289 96 0 chr20 10182294 10182429 -61971453 - L1M1 LINE L1 -2406 5402 5255 21 36 0 0 chr20 10183340 10183368 -61970514 + AT_rich Low_complexity Low_complexity 1 28 0 1898 115 18 4 chr20 10183484 10183784 -61970098 - AluSx SINE Alu 0 304 1 3234 217 82 21 chr20 10183910 10184886 -61968996 + L1MC4a LINE L1 6773 7807 -1 1026 216 28 5 chr20 10185638 10185851 -61968031 + MER20 DNA MER1_type 1 218 -1 25 51 0 0 chr20 10186022 10186061 -61967821 + AT_rich Low_complexity Low_complexity 1 39 0 180 0 0 0 chr20 10186457 10186477 -61967405 + (T)n Simple_repeat Simple_repeat 1 20 0 2018 144 3 0 chr20 10186765 10187064 -61966818 - AluSq SINE Alu -13 300 1 537 273 0 7 chr20 10187156 10187310 -61966572 - L1MB4 LINE L1 -6 6174 6022 863 169 51 20 chr20 10187801 10187996 -61965886 - L1MB4 LINE L1 -196 5984 5784 1574 238 129 24 chr20 10187999 10188503 -61965379 + L1ME1 LINE L1 5454 6010 -156 254 239 63 42 chr20 10188519 10188661 -61965221 + L1MC5 LINE L1 7423 7567 -394 354 350 121 8 chr20 10188750 10188990 -61964892 + L3 LINE CR1 567 833 -744 337 295 40 45 chr20 10189487 10189687 -61964195 + L1MC5 LINE L1 7645 7843 -118 3342 119 52 17 chr20 10189706 10190284 -61963598 - L1MA5 LINE L1 -19 6281 5684 1300 213 91 31 chr20 10190416 10190834 -61963048 + LTR47B LTR ERVL 1 443 0 211 215 134 107 chr20 10191567 10191702 -61962180 - MIR SINE MIR -63 145 17 1196 12 47 7 chr20 10192786 10193215 -61960667 + (CATA)n Simple_repeat Simple_repeat 1 446 0 866 291 72 23 chr20 10193423 10193770 -61960112 + L1MC4a LINE L1 5481 5844 -1964 1941 138 19 19 chr20 10193790 10194102 -61959780 + AluSx SINE Alu 1 312 0 317 314 126 0 chr20 10194177 10194352 -61959530 - L1ME4a LINE L1 -112 6009 5813 207 0 0 0 chr20 10195459 10195482 -61958400 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1234 274 88 28 chr20 10196028 10196662 -61957220 + L1M4 LINE L1 3519 4190 -1956 2165 206 154 4 chr20 10196714 10197266 -61956616 - MLT1E1 LTR MaLR -19 635 1 573 266 149 56 chr20 10197286 10198077 -61955805 + L1M4 LINE L1 4266 5130 -1016 311 136 34 102 chr20 10199273 10199361 -61954521 + MLT1I LTR MaLR 344 409 0 230 308 37 0 chr20 10199392 10199499 -61954383 - L1M4 LINE L1 -1307 4839 4729 327 281 84 39 chr20 10199665 10199868 -61954014 - L1M4 LINE L1 -1669 4477 4266 249 190 86 52 chr20 10200707 10200758 -61953124 - MLT1I LTR MaLR -4 405 353 645 272 161 31 chr20 10200758 10201107 -61952775 + MLT1G LTR MaLR 2 395 -195 663 241 143 93 chr20 10201811 10202314 -61951568 - MLT1F LTR MaLR -14 528 1 2355 94 19 38 chr20 10202478 10202849 -61951033 - THE1B LTR MaLR 0 364 1 181 358 109 15 chr20 10202941 10203078 -61950804 - L2 LINE L2 -316 2997 2848 255 86 0 0 chr20 10203218 10203253 -61950629 - MADE1 DNA Mariner -45 35 1 297 200 213 0 chr20 10203276 10203356 -61950526 - MIR SINE MIR -30 232 136 281 280 54 11 chr20 10204307 10204400 -61949482 - MIR3 SINE MIR -5 203 107 329 304 72 101 chr20 10204763 10205220 -61948662 - L1M2 LINE L1 -5651 1198 755 317 342 124 42 chr20 10204950 10205468 -61948414 + L1M2 LINE L1 672 1231 -5618 * 1139 71 14 5 chr20 10206190 10206405 -61947477 + (TC)n Simple_repeat Simple_repeat 1 217 0 961 131 0 0 chr20 10208341 10208478 -61945404 - AluSg/x SINE Alu -25 287 151 180 340 0 0 chr20 10209199 10209249 -61944633 - L2 LINE L2 -1 3271 3222 335 246 164 41 chr20 10209252 10209447 -61944435 - MER20 DNA MER1_type 0 219 1 183 80 0 0 chr20 10209695 10209720 -61944162 + (A)n Simple_repeat Simple_repeat 1 25 0 229 281 44 97 chr20 10210059 10210287 -61943595 + L2 LINE L2 3098 3313 0 197 272 167 35 chr20 10210391 10210505 -61943377 - L2 LINE L2 0 3313 3185 212 220 20 0 chr20 10211535 10211585 -61942297 + (TA)n Simple_repeat Simple_repeat 1 51 0 489 182 73 0 chr20 10212401 10212529 -61941353 - MIR SINE MIR -63 145 64 301 306 14 0 chr20 10212725 10212797 -61941085 - L2 LINE L2 0 3272 3200 188 325 167 42 chr20 10213674 10213794 -61940088 + L2 LINE L2 3133 3267 -5 31 0 0 0 chr20 10214303 10214334 -61939548 + AT_rich Low_complexity Low_complexity 1 31 0 255 225 0 28 chr20 10214729 10214800 -61939082 - L1MC4 LINE L1 -138 7904 7836 558 259 112 68 chr20 10214853 10215388 -61938494 - L1MC5 LINE L1 -364 7678 7127 22 35 0 0 chr20 10216464 10216493 -61937389 + AT_rich Low_complexity Low_complexity 1 29 0 1197 267 112 44 chr20 10216662 10217453 -61936429 - L2 LINE L2 -5 3308 2458 2235 105 0 25 chr20 10217651 10217966 -61935916 + AluSq SINE Alu 1 307 -6 3951 123 34 65 chr20 10218464 10219263 -61934619 - LTR1 LTR ERV1 0 785 12 26 30 0 0 chr20 10219636 10219669 -61934213 + AT_rich Low_complexity Low_complexity 1 33 0 532 265 94 0 chr20 10219767 10219948 -61933934 - MIR SINE MIR -1 261 64 195 139 0 0 chr20 10221214 10221250 -61932632 + (TTTA)n Simple_repeat Simple_repeat 3 38 0 440 338 20 33 chr20 10222342 10222493 -61931389 + L2 LINE L2 3114 3262 -10 197 397 0 13 chr20 10222503 10222581 -61931301 + L2 LINE L2 3187 3263 -9 441 296 61 61 chr20 10222714 10222961 -61930921 - MIR SINE MIR 0 262 16 257 347 100 37 chr20 10223381 10223652 -61930230 - L2 LINE L2 -157 3115 2828 * 850 305 123 37 chr20 10223651 10224440 -61929442 - L2 LINE L2 -729 2585 1729 635 345 82 23 chr20 10225699 10226137 -61927745 - L2 LINE L2 -5 3267 2804 2813 112 9 14 chr20 10226508 10226891 -61926991 - MSTA LTR MaLR 0 428 46 2829 126 70 8 chr20 10226891 10227374 -61926508 - LTR10D LTR ERV1 0 513 1 2813 112 9 14 chr20 10227374 10227420 -61926462 - MSTA LTR MaLR -382 46 1 1736 289 166 22 chr20 10227511 10228568 -61925314 - L2 LINE L2 -1154 2160 951 811 214 62 26 chr20 10229047 10229239 -61924643 + MER58A DNA MER1_type 1 199 -25 21 57 0 0 chr20 10230475 10230510 -61923372 + AT_rich Low_complexity Low_complexity 1 35 0 333 249 272 6 chr20 10230649 10230822 -61923060 - L1M4 LINE L1 -3794 2352 2134 21 0 0 0 chr20 10232347 10232368 -61921514 + AT_rich Low_complexity Low_complexity 1 21 0 1362 136 40 9 chr20 10233119 10233347 -61920535 + MER46A DNA MER2_type 2 236 0 2266 99 0 0 chr20 10234409 10234703 -61919179 - AluSg SINE Alu -16 294 1 2234 108 10 0 chr20 10235680 10235975 -61917907 - AluSg SINE Alu -12 298 1 22 0 0 0 chr20 10237676 10237698 -61916184 + AT_rich Low_complexity Low_complexity 1 22 0 2213 112 3 0 chr20 10239145 10239440 -61914442 + AluJb SINE Alu 1 296 -16 234 150 0 0 chr20 10239440 10239480 -61914402 + (TA)n Simple_repeat Simple_repeat 1 40 0 667 128 40 8 chr20 10239963 10240088 -61913794 + L1MA6 LINE L1 6172 6300 0 348 204 65 46 chr20 10241511 10241619 -61912263 - MLT1K LTR MaLR -27 561 452 250 328 0 0 chr20 10242149 10242265 -61911617 + GA-rich Low_complexity Low_complexity 1 116 0 1874 149 40 6 chr20 10244582 10244930 -61908952 + MER46B DNA MER2_type 1 235 -1 2212 97 20 10 chr20 10244959 10245259 -61908623 - AluSp SINE Alu -9 304 2 27 29 0 0 chr20 10245617 10245651 -61908231 + AT_rich Low_complexity Low_complexity 1 34 0 23 33 0 0 chr20 10247323 10247353 -61906529 + AT_rich Low_complexity Low_complexity 1 30 0 615 256 77 51 chr20 10248164 10248235 -61905647 - MLT1J1 LTR MaLR -126 320 252 2080 142 0 0 chr20 10248235 10248537 -61905345 + AluSx SINE Alu 1 302 -10 615 256 77 51 chr20 10248537 10248777 -61905105 - MLT1J1 LTR MaLR -194 252 1 1001 163 0 0 chr20 10249338 10249491 -61904391 + AluJo SINE Alu 1 153 -159 672 252 126 52 chr20 10249570 10249895 -61903987 + L1MEd LINE L1 20 368 -5751 412 290 46 0 chr20 10250137 10250268 -61903614 + L1MEd LINE L1 597 733 -5386 542 261 19 0 chr20 10250377 10250538 -61903344 - L1ME3 LINE L1 -278 5884 5721 550 194 75 75 chr20 10250689 10250849 -61903033 + MIR SINE MIR 8 167 -95 325 273 98 28 chr20 10252183 10252326 -61901556 + MIR SINE MIR 110 262 0 2766 164 42 43 chr20 10252397 10253000 -61900882 - L1MB3 LINE L1 -10 6173 5572 1030 48 0 0 chr20 10253490 10253614 -61900268 + AluY SINE Alu 176 299 -12 882 239 5 0 chr20 10254190 10254374 -61899508 - MER5A DNA MER1_type -2 187 3 541 306 38 24 chr20 10254993 10255202 -61898680 - MIR SINE MIR 0 262 51 587 225 39 42 chr20 10255222 10255475 -61898407 - MER106B DNA MER1_type 0 1059 1 1000 202 101 24 chr20 10255485 10255782 -61898100 + MER33 DNA MER1_type 3 322 -2 281 255 21 43 chr20 10255927 10256021 -61897861 - L3 LINE CR1 -276 1301 1210 1874 148 13 69 chr20 10256052 10256444 -61897438 + MLT1B LTR MaLR 21 390 0 557 115 10 6 chr20 10257253 10257352 -61896530 - L1ME LINE L1 -699 5463 5365 1005 184 29 0 chr20 10257421 10257628 -61896254 + MER20 DNA MER1_type 1 213 -6 210 343 201 34 chr20 10257710 10258089 -61895793 + L2 LINE L2 2831 3272 0 214 309 62 69 chr20 10258177 10258465 -61895417 - L2 LINE L2 -1421 1893 1608 2151 107 17 13 chr20 10259845 10260145 -61893737 - AluSx SINE Alu -11 301 1 2243 105 10 0 chr20 10260391 10260695 -61893187 + AluSp SINE Alu 1 307 -6 248 375 62 16 chr20 10260745 10260873 -61893009 + MIR3 SINE MIR 10 143 -65 2185 92 3 32 chr20 10262091 10262405 -61891477 + AluSx SINE Alu 1 305 -7 36 62 0 0 chr20 10262446 10262510 -61891372 + AT_rich Low_complexity Low_complexity 1 64 0 830 207 43 22 chr20 10263658 10263890 -61889992 + L1ME3A LINE L1 5929 6165 -5 2567 40 0 0 chr20 10264846 10265142 -61888740 - AluY SINE Alu -15 296 1 469 308 19 6 chr20 10265165 10265324 -61888558 - MIR SINE MIR -14 248 88 386 344 23 0 chr20 10266224 10266352 -61887530 - MIR SINE MIR -112 150 20 22 0 0 0 chr20 10266602 10266624 -61887258 + AT_rich Low_complexity Low_complexity 1 22 0 459 257 66 7 chr20 10266807 10266943 -61886939 + L2 LINE L2 3167 3310 -3 29 0 0 0 chr20 10268892 10268921 -61884961 + GC_rich Low_complexity Low_complexity 1 29 0 265 269 26 0 chr20 10269249 10269327 -61884555 + CT-rich Low_complexity Low_complexity 2 81 0 195 129 0 0 chr20 10269989 10270020 -61883862 + (GGGA)n Simple_repeat Simple_repeat 4 34 0 401 155 0 0 chr20 10270023 10270094 -61883788 + L1ME LINE L1 5458 5528 -634 362 94 16 0 chr20 10270112 10270176 -61883706 + (GA)n Simple_repeat Simple_repeat 1 65 0 1451 235 111 16 chr20 10270176 10270715 -61883167 + L1ME1 LINE L1 5486 6065 -101 252 341 0 0 chr20 10270968 10271050 -61882832 - L2 LINE L2 -4 3268 3187 434 34 34 0 chr20 10271339 10271398 -61882484 + (TTTCC)n Simple_repeat Simple_repeat 5 65 0 1586 51 0 28 chr20 10272308 10272523 -61881359 - L1PA4 LINE L1 0 6155 5947 238 277 0 15 chr20 10272694 10272759 -61881123 - MIR SINE MIR -6 256 193 351 297 69 45 chr20 10272773 10272975 -61880907 + MLT1L LTR MaLR 22 228 -387 325 346 72 20 chr20 10273160 10273313 -61880569 - MIR SINE MIR -99 163 3 228 304 13 13 chr20 10273504 10273583 -61880299 + MIR SINE MIR 62 140 -68 712 303 35 4 chr20 10273607 10273838 -61880044 - MIR SINE MIR -24 238 1 380 230 18 44 chr20 10274283 10274396 -61879486 + MLT1J1 LTR MaLR 204 313 -133 236 319 0 0 chr20 10275710 10275782 -61878100 + MLT1J LTR MaLR 1 72 -439 403 285 123 12 chr20 10275805 10276058 -61877824 + MLT1J LTR MaLR 231 511 0 2453 75 3 0 chr20 10277111 10277418 -61876464 + AluY SINE Alu 1 308 -3 1106 202 4 40 chr20 10277679 10277907 -61875975 - MER58A DNA MER1_type -3 221 2 243 0 0 0 chr20 10278208 10278235 -61875647 + (CA)n Simple_repeat Simple_repeat 1 27 0 * 270 0 0 0 chr20 10278234 10278264 -61875618 + (TC)n Simple_repeat Simple_repeat 2 31 0 546 219 8 47 chr20 10278639 10278767 -61875115 + MER5A DNA MER1_type 4 126 -63 192 77 0 0 chr20 10279502 10279528 -61874354 + (TA)n Simple_repeat Simple_repeat 2 27 0 2841 260 73 69 chr20 10279904 10280313 -61873569 - HAL1 LINE L1 0 2507 2101 277 75 38 0 chr20 10280313 10280366 -61873516 + (TA)n Simple_repeat Simple_repeat 1 55 0 2841 260 73 69 chr20 10280366 10281807 -61872075 - HAL1 LINE L1 -406 2101 649 467 301 111 10 chr20 10281849 10282048 -61871834 - MIR SINE MIR -7 255 37 1240 228 92 76 chr20 10283383 10283914 -61869968 + MLT1H LTR MaLR 1 582 -8 186 414 0 0 chr20 10284278 10284365 -61869517 - MIR SINE MIR -97 165 79 915 240 114 53 chr20 10285444 10285899 -61867983 + LTR33 LTR ERVL 39 521 0 40547 36 21 5 chr20 10286569 10292620 -61861262 + L1PA3 LINE L1 3 6154 -1 514 344 25 42 chr20 10293015 10293300 -61860582 + MLT1K LTR MaLR 97 376 -212 975 287 45 41 chr20 10293741 10294391 -61859491 - L2 LINE L2 0 3313 2666 321 280 33 88 chr20 10294394 10294576 -61859306 + HAL1 LINE L1 1130 1301 -1206 2552 148 5 0 chr20 10294728 10295140 -61858742 + L1PA15-16 LINE L1 2 415 -6434 3839 199 8 1 chr20 10295173 10295881 -61858001 - L1PA15-16 LINE L1 -5717 1132 420 8530 190 10 15 chr20 10295886 10298882 -61855000 + L1PA15-16 LINE L1 1506 4485 -2364 1128 112 17 48 chr20 10298870 10298911 -61854971 + L1P4 LINE L1 5313 5354 -797 * 2340 102 3 6 chr20 10298911 10299224 -61854658 - AluSp SINE Alu 0 313 2 1128 112 17 48 chr20 10299224 10299433 -61854449 + L1P4 LINE L1 5354 5540 -611 * 3556 230 49 65 chr20 10299428 10301240 -61852642 - L1MD1 LINE L1 -203 6039 4265 437 298 75 0 chr20 10301242 10301403 -61852479 + LTR16C LTR ERVL 318 490 -1 698 291 15 0 chr20 10301492 10301698 -61852184 + MER63A DNA MER1_type 1 209 -1 259 223 45 102 chr20 10302480 10302582 -61851300 - MIR SINE MIR -55 207 116 2145 62 0 0 chr20 10302582 10302856 -61851026 + L1PA7 LINE L1 5875 6148 -6 259 223 45 102 chr20 10302856 10302910 -61850972 - MIR SINE MIR -146 116 60 7062 40 1 7 chr20 10303095 10303987 -61849895 + L1PA5 LINE L1 5275 6161 0 1464 153 20 51 chr20 10304003 10304298 -61849584 + MER51A LTR ERV1 268 553 -81 908 228 135 15 chr20 10304339 10304739 -61849143 - LTR16A1 LTR ERVL 0 457 10 2305 110 7 0 chr20 10304882 10305190 -61848692 - AluSq SINE Alu -3 310 1 317 194 0 15 chr20 10305555 10305622 -61848260 + MLT1H LTR MaLR 259 324 -225 495 296 111 60 chr20 10306634 10306850 -61847032 - MIR SINE MIR -21 241 15 6722 142 31 9 chr20 10307225 10308429 -61845453 + Tigger3b DNA MER2_type 1 1230 -1 491 224 230 63 chr20 10308708 10308882 -61845000 - MIR SINE MIR -2 260 58 1145 165 31 145 chr20 10308901 10309288 -61844594 + MLT1A1 LTR MaLR 12 354 -11 1826 129 0 84 chr20 10309556 10309912 -61843970 + AluSx SINE Alu 1 312 0 1373 232 12 57 chr20 10310726 10311148 -61842734 - LTR16A1 LTR ERVL -6 451 49 1527 193 39 20 chr20 10311562 10311868 -61842014 + AluJo SINE Alu 1 312 0 1566 210 3 0 chr20 10312321 10312612 -61841270 - AluSx SINE Alu -20 292 1 1220 227 145 10 chr20 10312739 10313140 -61840742 + L1ME1 LINE L1 5704 6158 -8 617 348 82 0 chr20 10314243 10314476 -61839406 - MIR SINE MIR -10 252 1 1126 257 93 35 chr20 10315248 10315765 -61838117 + MLT1H LTR MaLR 3 549 0 1995 145 42 0 chr20 10315784 10316115 -61837767 - MER7A DNA MER2_type 0 346 4 410 256 0 55 chr20 10316648 10316812 -61837070 + MER112 DNA MER1_type 100 254 -6 2684 151 14 0 chr20 10317889 10318332 -61835550 + L1PA16 LINE L1 5718 6166 0 199 268 0 0 chr20 10318462 10318503 -61835379 + MER5B DNA MER1_type 3 43 -135 537 247 65 0 chr20 10318512 10318682 -61835200 + L1M4 LINE L1 4766 4946 -1200 235 291 76 0 chr20 10318706 10318785 -61835097 - LTR16C LTR ERVL -269 222 138 511 240 0 8 chr20 10318906 10319035 -61834847 + MER94 DNA DNA 4 131 -3 576 314 66 63 chr20 10320440 10320635 -61833247 + L2 LINE L2 2912 3110 -162 1769 190 19 27 chr20 10320635 10321003 -61832879 + MLT1A1 LTR MaLR 1 365 0 576 314 66 63 chr20 10321003 10321157 -61832725 + L2 LINE L2 3110 3262 -10 197 333 0 0 chr20 10321206 10321266 -61832616 + L2 LINE L2 3248 3307 -6 988 275 62 17 chr20 10323553 10323936 -61829946 + LTR16A1 LTR ERVL 80 457 0 182 295 16 0 chr20 10324001 10324062 -61829820 - MIR SINE MIR -14 248 187 366 61 0 0 chr20 10324279 10324328 -61829554 + (TG)n Simple_repeat Simple_repeat 1 49 0 207 320 31 82 chr20 10324334 10324431 -61829451 - MIR SINE MIR -160 102 11 181 133 0 0 chr20 10324738 10324768 -61829114 + MIR SINE MIR 113 142 -120 1140 289 85 8 chr20 10325396 10325797 -61828085 + MLT1H LTR MaLR 118 549 0 464 322 87 26 chr20 10325939 10326169 -61827713 + MIR SINE MIR 3 246 -16 21 0 0 0 chr20 10326923 10326944 -61826938 + AT_rich Low_complexity Low_complexity 1 21 0 1884 255 95 14 chr20 10327263 10327887 -61825995 - L1ME3 LINE L1 -49 6113 5440 262 387 16 0 chr20 10330024 10330148 -61823734 + L2 LINE L2 2927 3052 -220 209 315 34 48 chr20 10330249 10330395 -61823487 + MIR SINE MIR 109 252 -10 566 269 28 33 chr20 10331339 10331592 -61822290 + L1MC4a LINE L1 5644 5818 -541 348 24 0 0 chr20 10331626 10331667 -61822215 + (TG)n Simple_repeat Simple_repeat 2 42 0 193 320 60 40 chr20 10332795 10332995 -61820887 + L2 LINE L2 1519 1722 -1592 357 213 50 50 chr20 10334387 10334528 -61819354 - L1ME4a LINE L1 -1 6120 5980 551 296 85 38 chr20 10334551 10335106 -61818776 - L1ME4a LINE L1 -189 5932 5352 29 0 0 0 chr20 10335381 10335410 -61818472 + AT_rich Low_complexity Low_complexity 1 29 0 1693 193 0 7 chr20 10335410 10335695 -61818187 - AluJo SINE Alu -26 286 4 226 286 101 10 chr20 10336419 10336618 -61817264 - L1ME4a LINE L1 -2166 3980 3764 207 100 0 0 chr20 10337620 10337650 -61816232 + (TTA)n Simple_repeat Simple_repeat 1 30 0 315 257 14 0 chr20 10337701 10337775 -61816107 + L1ME3A LINE L1 5561 5635 -535 1406 229 51 88 chr20 10337833 10338404 -61815478 + L1ME3A LINE L1 5615 6164 -6 225 0 0 0 chr20 10339696 10339721 -61814161 + (TC)n Simple_repeat Simple_repeat 2 26 0 896 206 0 0 chr20 10339721 10339886 -61813996 - FAM SINE Alu -10 165 1 947 212 31 50 chr20 10340503 10340725 -61813157 + MER20 DNA MER1_type 2 219 0 648 242 24 12 chr20 10341121 10341286 -61812596 + MER3 DNA MER1_type 1 167 -42 275 246 0 0 chr20 10341308 10341373 -61812509 + MER3 DNA MER1_type 143 207 -2 1344 131 13 97 chr20 10341390 10341688 -61812194 + L1MA4A LINE L1 6020 6292 -11 1655 171 54 13 chr20 10341862 10342041 -61811841 - AluJo SINE Alu -2 310 113 352 0 20 20 chr20 10342041 10342090 -61811792 + (TTTTA)n Simple_repeat Simple_repeat 5 53 0 1655 171 54 13 chr20 10342090 10342208 -61811674 - AluJo SINE Alu -199 113 1 257 299 0 0 chr20 10342209 10342276 -61811606 - MER5A DNA MER1_type -114 75 9 1050 190 5 28 chr20 10342292 10342503 -61811379 + MER3 DNA MER1_type 1 206 -3 510 231 33 83 chr20 10342534 10342776 -61811106 + MER5C DNA MER1_type 43 272 -52 1945 159 46 3 chr20 10342790 10343181 -61810701 + L1MA5A LINE L1 5886 6293 -4 968 139 46 109 chr20 10343204 10343442 -61810440 + AluJb SINE Alu 81 303 -9 746 137 0 16 chr20 10343739 10343899 -61809983 - AluSc SINE Alu 0 327 170 823 149 88 136 chr20 10344727 10344960 -61808922 + MER33 DNA MER1_type 6 224 -2361 2185 108 0 3 chr20 10344960 10345256 -61808626 + AluSg SINE Alu 1 295 -15 823 149 88 136 chr20 10345256 10345317 -61808565 + MER33 DNA MER1_type 224 286 -38 215 61 30 0 chr20 10346653 10346686 -61807196 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 416 202 82 99 chr20 10346771 10347014 -61806868 + L1MC5 LINE L1 7696 7934 -27 * 916 191 39 85 chr20 10347004 10347334 -61806548 + L1ME3A LINE L1 5851 6165 -5 354 348 62 17 chr20 10347633 10347811 -61806071 - MIR SINE MIR -75 187 2 1095 275 77 31 chr20 10349170 10349875 -61804007 + L1MCa LINE L1 1184 2125 -4482 202 306 198 22 chr20 10350796 10351018 -61802864 - MIR SINE MIR 0 262 2 1878 200 57 11 chr20 10351141 10351581 -61802301 - MLT1C LTR MaLR 0 467 8 247 268 0 0 chr20 10351908 10351964 -61801918 - L2 LINE L2 -2 3311 3256 1208 250 159 50 chr20 10352611 10353248 -61800634 - MER20B DNA MER1_type -76 707 2 900 251 93 5 chr20 10353310 10353525 -61800357 - MIR SINE MIR -9 253 20 414 200 70 0 chr20 10353534 10353634 -61800248 - Charlie2 DNA MER1_type -2297 565 459 212 323 101 20 chr20 10353749 10353848 -61800034 + L2 LINE L2 3207 3313 0 2008 157 40 40 chr20 10353891 10354287 -61799595 - MSTD LTR MaLR 0 396 1 225 278 14 14 chr20 10355418 10355490 -61798392 - L3 LINE CR1 -436 1141 1070 204 97 0 0 chr20 10356075 10356106 -61797776 + (TA)n Simple_repeat Simple_repeat 1 31 0 2299 162 47 0 chr20 10357348 10357756 -61796126 - MSTA LTR MaLR -1 427 1 180 0 0 0 chr20 10358251 10358271 -61795611 + (CCA)n Simple_repeat Simple_repeat 1 20 0 284 292 142 35 chr20 10358286 10358512 -61795370 + L2 LINE L2 2728 2977 -337 238 291 101 0 chr20 10359172 10359251 -61794631 + L1MC/D LINE L1 5727 5813 -531 209 305 53 53 chr20 10359405 10359536 -61794346 - MIR SINE MIR -57 151 21 942 260 226 28 chr20 10360542 10361007 -61792875 + Charlie2 DNA MER1_type 39 595 -2267 1968 239 142 24 chr20 10361117 10361859 -61792023 + Charlie2a DNA MER1_type 1468 2296 -566 988 244 0 0 chr20 10361876 10362081 -61791801 + AluJo SINE Alu 68 272 -40 1660 191 3 13 chr20 10364067 10364371 -61789511 + AluJo SINE Alu 1 301 -11 21 0 0 0 chr20 10365994 10366015 -61787867 + AT_rich Low_complexity Low_complexity 1 21 0 1014 224 112 58 chr20 10366017 10366633 -61787249 - L1MC5 LINE L1 -35 7926 7278 1376 152 33 13 chr20 10367161 10367519 -61786363 - MSTB LTR MaLR 0 426 1 991 260 31 24 chr20 10367880 10368168 -61785714 - LTR16C LTR ERVL 0 491 202 196 313 12 125 chr20 10368449 10368689 -61785193 + L2 LINE L2 2301 2513 -801 276 100 0 0 chr20 10368821 10368861 -61785021 + (TG)n Simple_repeat Simple_repeat 1 40 0 1761 145 14 3 chr20 10369572 10369869 -61784013 + AluSx SINE Alu 1 300 -12 682 314 57 26 chr20 10370940 10371471 -61782411 + L1ME LINE L1 3878 4424 -1722 255 306 20 0 chr20 10371554 10371652 -61782230 + L1ME LINE L1 4952 5051 -1095 311 318 16 0 chr20 10371776 10371879 -61782003 + L1ME LINE L1 5162 5287 -854 21 0 0 0 chr20 10371879 10371900 -61781982 + AT_rich Low_complexity Low_complexity 1 21 0 669 290 32 9 chr20 10371905 10372126 -61781756 + MIR SINE MIR 5 230 -32 437 316 56 24 chr20 10372491 10372781 -61781101 + L1ME LINE L1 5511 5727 -394 264 91 0 0 chr20 10372975 10373019 -61780863 + (TG)n Simple_repeat Simple_repeat 2 45 0 7870 46 11 0 chr20 10373540 10375271 -61778611 + L1PA5 LINE L1 4407 6147 -7 27 0 0 0 chr20 10375271 10375298 -61778584 + AT_rich Low_complexity Low_complexity 1 27 0 1642 231 19 24 chr20 10375668 10375742 -61778140 + L1MC4a LINE L1 7324 7397 -411 1842 141 73 17 chr20 10375742 10376097 -61777785 + THE1C LTR MaLR 1 375 0 1642 231 19 24 chr20 10376097 10376447 -61777435 + L1MC4a LINE L1 7397 7746 -62 1056 164 15 5 chr20 10376459 10376654 -61777228 - MLT1A1 LTR MaLR -132 233 37 458 278 158 56 chr20 10377803 10378234 -61775648 - MLT1J LTR MaLR -34 477 3 617 261 187 11 chr20 10378530 10378832 -61775050 - L1ME4a LINE L1 -286 5835 5480 774 233 39 49 chr20 10380372 10380668 -61773214 + L1MC4 LINE L1 7741 8035 -7 946 97 0 0 chr20 10380668 10380802 -61773080 + L1MA2 LINE L1 6171 6304 0 429 223 0 36 chr20 10382566 10382678 -61771204 - L1MA9 LINE L1 -38 6274 6167 490 151 13 164 chr20 10382745 10382904 -61770978 + L1MA9 LINE L1 5855 5989 -323 299 226 303 9 chr20 10383572 10383681 -61770201 + MLT1I LTR MaLR 29 137 -272 207 0 0 0 chr20 10384081 10384104 -61769778 + (CCA)n Simple_repeat Simple_repeat 1 23 0 226 363 106 11 chr20 10384493 10384870 -61769012 - L2 LINE L2 -748 2566 2154 852 287 97 18 chr20 10384909 10385299 -61768583 + LTR16B LTR ERVL 38 458 -6 396 278 73 59 chr20 10385916 10386189 -61767693 + HAL1b LINE L1 440 716 -632 229 197 28 14 chr20 10386331 10386402 -61767480 + (TA)n Simple_repeat Simple_repeat 1 72 0 1168 242 106 56 chr20 10386439 10386803 -61767079 - L1MC4a LINE L1 -1929 5879 5485 2661 48 0 12 chr20 10386803 10387177 -61766705 + L1PA7 LINE L1 5807 6176 0 1168 242 106 56 chr20 10387177 10387274 -61766608 - L1MC4a LINE L1 -2323 5485 5394 591 282 95 41 chr20 10387343 10387932 -61765950 + HAL1b LINE L1 719 1339 -9 295 296 105 26 chr20 10388585 10388737 -61765145 - MIR SINE MIR -49 213 50 2272 118 0 0 chr20 10389066 10389372 -61764510 + AluSx SINE Alu 1 306 -6 1136 257 3 31 chr20 10389420 10389708 -61764174 - MLT1H LTR MaLR -231 318 39 1496 182 31 11 chr20 10389961 10390247 -61763635 - AluJo SINE Alu -13 299 8 405 293 141 30 chr20 10390582 10390668 -61763214 - L1ME4a LINE L1 -72 6049 5974 2156 77 7 0 chr20 10390668 10390940 -61762942 - AluSx SINE Alu 0 312 39 405 293 141 30 chr20 10390940 10390954 -61762928 - L1ME4a LINE L1 -147 5974 5963 423 56 0 0 chr20 10390954 10391008 -61762874 + (CA)n Simple_repeat Simple_repeat 2 55 0 405 293 141 30 chr20 10391008 10391210 -61762672 - L1ME4a LINE L1 -158 5963 5712 4220 165 18 15 chr20 10391413 10391789 -61762093 + L1PA15 LINE L1 3572 3945 -2220 2758 26 0 0 chr20 10391789 10392100 -61761782 + AluYa5 SINE Alu 1 311 0 4220 165 18 15 chr20 10392100 10394252 -61759630 + L1PA15 LINE L1 3945 6152 -13 207 69 0 0 chr20 10394303 10394332 -61759550 + (TAA)n Simple_repeat Simple_repeat 1 29 0 1790 175 38 15 chr20 10394501 10394844 -61759038 - MLT1A1 LTR MaLR -1 364 14 4841 187 53 49 chr20 10395118 10396627 -61757255 - L1MD2 LINE L1 -17 6602 5075 521 233 11 23 chr20 10396632 10396808 -61757074 - L1MD2 LINE L1 -3990 2416 2243 314 87 0 0 chr20 10396824 10396870 -61757012 + MADE1 DNA Mariner 1 46 -34 1353 191 3 68 chr20 10396871 10397180 -61756702 - AluJo SINE Alu -23 289 1 348 289 7 22 chr20 10397183 10397318 -61756564 - L1MD2 LINE L1 -4202 2204 2072 5825 227 54 24 chr20 10397333 10399284 -61754598 - L1MD2 LINE L1 -4387 2019 7 781 265 45 59 chr20 10399285 10399722 -61754160 + L2 LINE L2 2690 3113 -200 847 268 40 0 chr20 10400241 10400491 -61753391 - MIR SINE MIR 0 262 3 268 270 0 0 chr20 10401115 10401189 -61752693 + MER116 DNA Mariner 5 78 -2 22 35 0 0 chr20 10402423 10402452 -61751430 + AT_rich Low_complexity Low_complexity 1 29 0 480 345 109 9 chr20 10402455 10402675 -61751207 - MIR SINE MIR 0 262 21 1866 204 87 40 chr20 10403673 10404179 -61749703 + MLT1H LTR MaLR 17 546 -3 291 382 47 12 chr20 10404409 10404579 -61749303 + MIR3 SINE MIR 16 191 -17 364 277 10 0 chr20 10404654 10404755 -61749127 - L2 LINE L2 -2 3311 3210 524 284 77 16 chr20 10404758 10404952 -61748930 - MER63A DNA MER1_type -4 206 1 196 333 40 27 chr20 10405070 10405220 -61748662 - L2 LINE L2 -293 2979 2828 194 252 102 55 chr20 10405221 10405348 -61748534 - L2 LINE L2 -842 2472 2340 647 335 145 17 chr20 10405482 10406178 -61747704 - L2 LINE L2 -1223 2091 1307 206 338 154 17 chr20 10406270 10406510 -61747372 - L2 LINE L2 -2 3311 3039 208 288 136 32 chr20 10406511 10406636 -61747246 + MIR SINE MIR 93 230 -32 245 274 21 21 chr20 10407006 10407101 -61746781 - MLT1K LTR MaLR 0 588 494 331 306 60 82 chr20 10407218 10407387 -61746495 - MLT1K LTR MaLR -219 369 207 658 176 181 33 chr20 10407387 10407569 -61746313 + MER3 DNA MER1_type 1 209 0 331 306 60 82 chr20 10407569 10407680 -61746202 - MLT1K LTR MaLR -381 207 95 811 287 70 0 chr20 10408112 10408412 -61745470 - MER102b DNA MER1_type -12 329 9 980 250 0 5 chr20 10408690 10408906 -61744976 + LTR16C LTR ERVL 277 491 0 764 192 0 70 chr20 10410111 10410283 -61743599 + MER5B DNA MER1_type 13 172 -6 469 264 16 66 chr20 10410422 10410604 -61743278 + MIR SINE MIR 17 189 -73 459 189 0 87 chr20 10410627 10410823 -61743059 + (TA)n Simple_repeat Simple_repeat 2 180 0 23 54 0 0 chr20 10411032 10411069 -61742813 + AT_rich Low_complexity Low_complexity 1 37 0 27 0 0 0 chr20 10411080 10411107 -61742775 + AT_rich Low_complexity Low_complexity 1 27 0 2077 120 79 15 chr20 10411217 10411559 -61742323 + THE1B LTR MaLR 1 364 0 11722 90 8 11 chr20 10411559 10411930 -61741952 + THE1B-int LTR MaLR 1 371 -1209 2329 103 3 3 chr20 10411930 10412241 -61741641 - AluSp SINE Alu -2 311 1 11722 90 8 11 chr20 10412241 10413453 -61740429 + THE1B-int LTR MaLR 371 1580 0 342 94 41 0 chr20 10413453 10413520 -61740362 + THE1A LTR MaLR 1 41 -314 * 465 130 14 0 chr20 10413516 10413585 -61740297 + THE1C LTR MaLR 306 375 0 336 352 73 18 chr20 10415100 10415319 -61738563 - MIR SINE MIR -17 245 15 1317 249 81 3 chr20 10415482 10415815 -61738067 - LTR16C LTR ERVL -23 468 110 247 272 22 0 chr20 10417078 10417170 -61736712 + L1MC/D LINE L1 5186 5279 -867 339 314 110 55 chr20 10417180 10417671 -61736211 + L1MC/D LINE L1 5323 5841 -401 21 0 0 0 chr20 10419367 10419388 -61734494 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr20 10421548 10421571 -61732311 + AT_rich Low_complexity Low_complexity 1 23 0 284 158 13 0 chr20 10421719 10421795 -61732087 + (TA)n Simple_repeat Simple_repeat 2 78 0 774 196 0 0 chr20 10422440 10422573 -61731309 - FLAM_C SINE Alu 0 133 1 345 341 97 14 chr20 10423207 10423424 -61730458 + L1ME LINE L1 5409 5643 -478 208 67 0 44 chr20 10423437 10423482 -61730400 + (TTTA)n Simple_repeat Simple_repeat 3 45 0 27 81 0 0 chr20 10423545 10423607 -61730275 + AT_rich Low_complexity Low_complexity 1 62 0 391 298 48 8 chr20 10423719 10423843 -61730039 + MLT1J LTR MaLR 3 131 -380 577 240 139 50 chr20 10423906 10424164 -61729718 + MLT1J LTR MaLR 230 510 -1 25 0 0 0 chr20 10425023 10425048 -61728834 + AT_rich Low_complexity Low_complexity 1 25 0 2330 88 3 0 chr20 10426678 10426975 -61726907 - AluSq SINE Alu -15 298 1 813 221 70 120 chr20 10426979 10427405 -61726477 - L1ME3A LINE L1 -4 6166 5762 * 3230 169 96 3 chr20 10427396 10428041 -61725841 - L1MB4 LINE L1 0 6180 5476 717 294 73 45 chr20 10428069 10428600 -61725282 - L1ME3A LINE L1 -393 5769 5222 441 98 54 0 chr20 10428661 10428773 -61725109 + (TA)n Simple_repeat Simple_repeat 2 119 0 1093 252 136 29 chr20 10428779 10429295 -61724587 - L1MC4a LINE L1 -1875 5933 5363 267 280 65 65 chr20 10429415 10429508 -61724374 - MER5A DNA MER1_type -83 106 14 1416 96 0 0 chr20 10429832 10430040 -61723842 + AluSc SINE Alu 103 310 0 259 32 0 0 chr20 10430009 10430120 -61723762 + (TAA)n Simple_repeat Simple_repeat 1 111 0 * 294 282 13 0 chr20 10430540 10430618 -61723264 - MIR SINE MIR -27 235 157 336 24 0 0 chr20 10431741 10431782 -61722100 + (CA)n Simple_repeat Simple_repeat 1 41 0 1269 251 87 39 chr20 10432099 10432822 -61721060 + HAL1b LINE L1 343 1289 -59 2125 122 3 0 chr20 10437636 10437930 -61715952 + AluSx SINE Alu 3 297 -15 25 51 0 0 chr20 10438806 10438845 -61715037 + AT_rich Low_complexity Low_complexity 1 39 0 22 0 0 0 chr20 10438938 10438960 -61714922 + AT_rich Low_complexity Low_complexity 1 22 0 951 272 101 17 chr20 10439960 10440365 -61713517 - LTR16A1 LTR ERVL -18 439 1 439 220 120 65 chr20 10440405 10440605 -61713277 + L2 LINE L2 3099 3309 -4 207 297 0 54 chr20 10440793 10440867 -61713015 - MIR SINE MIR 0 262 193 455 258 172 7 chr20 10440869 10441020 -61712862 - MER5A DNA MER1_type 0 189 14 833 270 0 0 chr20 10441043 10441221 -61712661 - MIR SINE MIR -75 187 10 1080 269 109 16 chr20 10441834 10442283 -61711599 - LTR16C LTR ERVL 0 491 1 26 30 0 0 chr20 10442477 10442510 -61711372 + AT_rich Low_complexity Low_complexity 1 33 0 507 267 30 0 chr20 10443269 10443400 -61710482 - MIR SINE MIR -22 240 106 528 260 85 22 chr20 10443976 10444199 -61709683 + MIR SINE MIR 15 251 -11 575 293 18 0 chr20 10444312 10444476 -61709406 + MIR SINE MIR 60 226 -36 2909 205 83 20 chr20 10444665 10445363 -61708519 - Charlie1a DNA MER1_type -712 743 2 209 331 50 14 chr20 10445398 10445537 -61708345 - L2 LINE L2 -829 2485 2342 384 271 8 0 chr20 10445880 10446002 -61707880 + L1ME3 LINE L1 5391 5513 -651 321 274 0 0 chr20 10446054 10446171 -61707711 + (TA)n Simple_repeat Simple_repeat 2 118 0 740 287 99 18 chr20 10446272 10446655 -61707227 + L1ME3 LINE L1 5536 5949 -213 29 28 0 0 chr20 10446906 10446942 -61706940 + AT_rich Low_complexity Low_complexity 1 36 0 22 35 0 0 chr20 10447158 10447187 -61706695 + AT_rich Low_complexity Low_complexity 1 29 0 1539 165 15 11 chr20 10447303 10447563 -61706319 - AluJo SINE Alu -10 302 42 236 308 0 22 chr20 10448616 10448707 -61705175 - L1MC4 LINE L1 -1340 6702 6614 321 276 0 0 chr20 10448716 10448839 -61705043 + (TA)n Simple_repeat Simple_repeat 1 123 0 1669 193 7 0 chr20 10449606 10449902 -61703980 + AluJo SINE Alu 1 298 -14 22 35 0 0 chr20 10450069 10450098 -61703784 + AT_rich Low_complexity Low_complexity 1 29 0 226 77 0 103 chr20 10450545 10450584 -61703298 - HSMAR1 DNA Mariner 0 1287 1253 222 37 0 0 chr20 10450614 10450641 -61703241 + (TTCA)n Simple_repeat Simple_repeat 3 29 0 195 100 0 0 chr20 10450984 10451014 -61702868 + (CA)n Simple_repeat Simple_repeat 1 30 0 564 327 71 40 chr20 10451018 10451440 -61702442 + L2 LINE L2 2136 2570 -744 678 303 126 39 chr20 10451610 10452022 -61701860 - MLT1H LTR MaLR -100 449 2 1031 32 0 0 chr20 10452132 10452258 -61701624 - L1PA4 LINE L1 0 6155 6030 326 248 50 59 chr20 10452291 10452392 -61701490 + L2 LINE L2 3156 3255 -17 253 289 56 0 chr20 10453298 10453388 -61700494 + L1ME2 LINE L1 5579 5673 -448 823 325 13 0 chr20 10453455 10453692 -61700190 + MIR SINE MIR 12 251 -11 30 0 0 0 chr20 10454299 10454329 -61699553 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr20 10454436 10454457 -61699425 + AT_rich Low_complexity Low_complexity 1 21 0 610 345 37 34 chr20 10455837 10456217 -61697665 - L3 LINE CR1 -17 1560 1180 639 187 120 0 chr20 10456293 10456443 -61697439 - MIR SINE MIR -3 259 92 306 379 33 0 chr20 10458083 10458236 -61695646 + MIR SINE MIR 88 245 -17 2256 84 0 7 chr20 10459230 10459538 -61694344 + AluSx SINE Alu 1 306 0 666 226 60 93 chr20 10459816 10459926 -61693956 - MIR SINE MIR -2 260 148 2307 98 0 7 chr20 10459926 10460233 -61693649 + AluSx SINE Alu 1 305 -7 666 226 60 93 chr20 10460233 10460370 -61693512 - MIR SINE MIR -114 148 21 26 0 0 0 chr20 10460405 10460431 -61693451 + AT_rich Low_complexity Low_complexity 1 26 0 21 36 0 0 chr20 10460507 10460535 -61693347 + AT_rich Low_complexity Low_complexity 1 28 0 204 288 100 12 chr20 10460642 10460722 -61693160 - MIR3 SINE MIR -3 205 119 931 204 23 42 chr20 10461904 10462168 -61691714 + L1ME2 LINE L1 5792 6050 -114 1941 141 161 12 chr20 10462192 10462597 -61691285 - L1PA16 LINE L1 -1 6165 5701 456 195 0 2 chr20 10462589 10462685 -61691197 - L1M4 LINE L1 -611 5563 5469 * 393 237 51 0 chr20 10462687 10462805 -61691077 + L1ME2 LINE L1 6040 6163 -1 322 282 16 85 chr20 10463632 10463820 -61690062 + LTR16A1 LTR ERVL 2 176 -281 256 196 0 0 chr20 10463917 10463963 -61689919 + LTR16A1 LTR ERVL 245 290 -167 426 188 152 25 chr20 10464775 10465023 -61688859 - MLT1H LTR MaLR -13 536 207 358 324 22 7 chr20 10465721 10465860 -61688022 + MER117 DNA MER1_type 21 161 -36 749 230 86 19 chr20 10466071 10466280 -61687602 + MIR SINE MIR 40 262 0 1546 262 180 5 chr20 10466491 10467052 -61686830 - MLT2F LTR ERVL -4 659 1 385 298 85 48 chr20 10467068 10467256 -61686626 + MIR3 SINE MIR 9 203 -5 584 316 73 9 chr20 10468061 10468279 -61685603 + LTR16A LTR ERVL 207 438 -12 24 0 0 0 chr20 10468483 10468507 -61685375 + AT_rich Low_complexity Low_complexity 1 24 0 240 35 0 0 chr20 10468653 10468682 -61685200 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 515 196 0 0 chr20 10468834 10468931 -61684951 - MER5A DNA MER1_type -5 184 88 329 297 71 32 chr20 10468945 10469100 -61684782 + L2 LINE L2 3110 3270 -2 409 268 10 0 chr20 10470104 10470201 -61683681 + L2 LINE L2 3169 3266 -6 626 200 101 101 chr20 10470771 10471169 -61682713 - MLT1H LTR MaLR 0 549 86 1285 65 12 0 chr20 10471428 10471598 -61682284 + L1PA4 LINE L1 5981 6152 -3 543 333 26 4 chr20 10471905 10472136 -61681746 - MIR SINE MIR -26 236 1 555 225 12 23 chr20 10472380 10472641 -61681241 + GA-rich Low_complexity Low_complexity 1 257 0 909 316 80 29 chr20 10473405 10473858 -61680024 + LTR16C LTR ERVL 3 478 -13 875 253 192 47 chr20 10474851 10475357 -61678525 - MLT1G LTR MaLR 0 590 12 369 0 0 0 chr20 10475791 10475832 -61678050 + (TG)n Simple_repeat Simple_repeat 1 41 0 294 242 0 0 chr20 10476390 10476456 -61677426 + LTR16C LTR ERVL 426 491 0 22 0 0 0 chr20 10476974 10476996 -61676886 + AT_rich Low_complexity Low_complexity 1 22 0 592 263 126 10 chr20 10477123 10477321 -61676561 - MIR SINE MIR -22 240 20 670 292 123 42 chr20 10478449 10478478 -61675404 - MLT1J LTR MaLR -45 466 441 1927 167 0 0 chr20 10478478 10478777 -61675105 - AluJb SINE Alu -13 299 1 670 292 123 42 chr20 10478777 10479178 -61674704 - MLT1J LTR MaLR -70 441 1 214 229 34 8 chr20 10479453 10479571 -61674311 + (TA)n Simple_repeat Simple_repeat 1 121 0 1371 137 49 4 chr20 10479594 10479820 -61674062 - MER46A DNA MER2_type 0 236 1 33 66 0 0 chr20 10480167 10480228 -61673654 + AT_rich Low_complexity Low_complexity 1 61 0 724 174 8 0 chr20 10480912 10481044 -61672838 - FLAM_C SINE Alu 0 133 1 183 42 0 0 chr20 10481090 10481114 -61672768 + (TTTG)n Simple_repeat Simple_repeat 3 26 0 766 283 22 9 chr20 10481749 10481975 -61671907 - MIR SINE MIR 0 262 34 249 222 16 0 chr20 10482565 10482628 -61671254 - MER116 DNA Mariner -2 78 15 206 237 0 0 chr20 10483563 10483601 -61670281 + MIR SINE MIR 108 145 -63 760 284 84 9 chr20 10484077 10484292 -61669590 - MIR SINE MIR -31 231 1 627 246 161 42 chr20 10484533 10484919 -61668963 + MLT1J2 LTR MaLR 1 432 -18 1040 215 9 27 chr20 10485068 10485291 -61668591 + MER20 DNA MER1_type 1 219 0 2411 90 3 0 chr20 10485519 10485831 -61668051 + AluSp SINE Alu 1 313 0 399 341 43 12 chr20 10485866 10486030 -61667852 + MIR SINE MIR 84 252 -10 384 243 271 0 chr20 10488091 10488235 -61665647 - MER5A DNA MER1_type 0 189 7 181 299 117 13 chr20 10488259 10488336 -61665546 + L3 LINE CR1 1484 1568 -9 779 318 19 19 chr20 10488699 10488960 -61664922 - MIR SINE MIR 0 262 2 28 29 0 0 chr20 10489752 10489787 -61664095 + AT_rich Low_complexity Low_complexity 1 35 0 2153 225 40 41 chr20 10490233 10490864 -61663018 - L1ME2 LINE L1 -10 6154 5525 462 311 33 22 chr20 10491305 10491414 -61662468 + MIR SINE MIR 67 180 -82 761 210 45 19 chr20 10491414 10491571 -61662311 + FRAM SINE Alu 1 161 -5 462 311 33 22 chr20 10491571 10491641 -61662241 + MIR SINE MIR 180 248 -14 2645 19 0 7 chr20 10492005 10492315 -61661567 - AluY SINE Alu -3 308 1 295 275 117 85 chr20 10492797 10493298 -61660584 + L2 LINE L2 1739 3167 -146 620 320 81 13 chr20 10493347 10493581 -61660301 - MIR SINE MIR 0 262 13 458 273 167 13 chr20 10494710 10494860 -61659022 - MER5A DNA MER1_type -6 183 11 830 209 6 0 chr20 10494901 10495064 -61658818 - MER5A DNA MER1_type -23 166 3 557 159 39 154 chr20 10497150 10497332 -61656550 - MER20 DNA MER1_type -58 161 1 1034 62 0 0 chr20 10499458 10499586 -61654296 + AluY SINE Alu 177 304 -7 965 296 33 13 chr20 10499943 10500341 -61653541 + MLT1J LTR MaLR 106 511 0 312 269 0 32 chr20 10500589 10500682 -61653200 - L1MC4 LINE L1 -1339 6703 6614 10506 204 58 24 chr20 10501488 10501668 -61652214 + L1MC3 LINE L1 4181 4353 -3432 4406 105 9 3 chr20 10501668 10502314 -61651568 - L1PA11 LINE L1 -1 6173 5524 10506 204 58 24 chr20 10502314 10505617 -61648265 + L1MC3 LINE L1 4353 7785 0 1008 167 23 23 chr20 10505639 10505855 -61648027 + L1MB3 LINE L1 5965 6180 -3 212 218 126 23 chr20 10506307 10506394 -61647488 - MIR SINE MIR -35 227 132 337 277 59 0 chr20 10506624 10506731 -61647151 + MIR SINE MIR 38 155 -62 452 321 24 18 chr20 10506882 10507050 -61646832 - MLT1J2 LTR MaLR -29 421 253 1040 201 5 5 chr20 10507871 10508060 -61645822 - MER5A DNA MER1_type 0 189 1 823 153 0 8 chr20 10509125 10509256 -61644626 + FLAM_C SINE Alu 1 130 -3 2179 92 3 10 chr20 10509846 10510141 -61643741 - AluSx SINE Alu -18 294 2 208 163 0 23 chr20 10510160 10510203 -61643679 + CT-rich Low_complexity Low_complexity 4 45 0 637 280 43 10 chr20 10511546 10511753 -61642129 - LTR16A1 LTR ERVL -13 444 231 815 198 43 32 chr20 10513006 10513193 -61640689 - MER5A DNA MER1_type 0 189 1 249 216 0 0 chr20 10514524 10514575 -61639307 + MIR SINE MIR 87 137 -71 2069 174 155 54 chr20 10514758 10515350 -61638532 - MLT1E1 LTR MaLR 0 654 3 302 250 73 10 chr20 10515419 10515515 -61638367 + MIR SINE MIR 105 206 -56 207 351 18 35 chr20 10516766 10516880 -61637002 - MIR SINE MIR -67 141 30 883 222 5 11 chr20 10518891 10519080 -61634802 + MER5A DNA MER1_type 2 189 0 300 354 31 15 chr20 10519100 10519230 -61634652 - MIR3 SINE MIR -63 145 14 2114 145 3 0 chr20 10519837 10520148 -61633734 + AluSx SINE Alu 1 312 0 237 309 82 18 chr20 10520602 10520712 -61633170 + L2 LINE L2 3197 3313 0 30 0 0 0 chr20 10524038 10524068 -61629814 + AT_rich Low_complexity Low_complexity 1 30 0 309 283 101 50 chr20 10524893 10525049 -61628833 + MIR SINE MIR 53 216 -46 487 231 98 69 chr20 10525049 10525222 -61628660 - MER5B DNA MER1_type 0 178 1 2071 114 46 32 chr20 10525667 10526036 -61627846 + THE1C LTR MaLR 1 374 -1 463 245 94 38 chr20 10526946 10527158 -61626724 - MER112 DNA MER1_type -7 253 30 251 274 120 8 chr20 10527268 10527385 -61626497 + MIR3 SINE MIR 43 172 -36 189 0 0 0 chr20 10527535 10527556 -61626326 + (A)n Simple_repeat Simple_repeat 1 21 0 349 236 34 11 chr20 10528085 10528174 -61625708 - L2 LINE L2 -21 3292 3202 511 272 46 41 chr20 10528195 10528238 -61625644 + MER63A DNA MER1_type 8 49 -1639 2535 68 0 0 chr20 10528238 10528547 -61625335 + AluY SINE Alu 1 309 -2 511 272 46 41 chr20 10528547 10528698 -61625184 + MER63A DNA MER1_type 49 203 -7 1899 286 116 18 chr20 10528716 10529643 -61624239 - L2 LINE L2 -168 3145 2070 1137 152 4 8 chr20 10529644 10529888 -61623994 + L1MB3 LINE L1 5641 5932 -251 3374 151 29 43 chr20 10529888 10530537 -61623345 - Tigger1 DNA MER2_type 0 2418 1779 26448 130 11 20 chr20 10530569 10533865 -61620017 - L1PA8A LINE L1 -6 6440 3116 2192 76 0 4 chr20 10533865 10534140 -61619742 - AluY SINE Alu -3 308 35 2148 95 10 17 chr20 10534142 10534438 -61619444 - AluY SINE Alu -17 294 1 26448 130 11 20 chr20 10534438 10537558 -61616324 - L1PA8A LINE L1 -3331 3115 7 11234 125 27 12 chr20 10537558 10539330 -61614552 - Tigger1 DNA MER2_type -619 1799 2 1471 108 47 0 chr20 10539330 10539562 -61614320 + L1MB3 LINE L1 5930 6172 -11 26 0 0 0 chr20 10539562 10539588 -61614294 + AT_rich Low_complexity Low_complexity 1 26 0 353 252 50 25 chr20 10539588 10539707 -61614175 - L2 LINE L2 -1230 2084 1963 189 107 0 0 chr20 10540343 10540371 -61613511 + (TG)n Simple_repeat Simple_repeat 1 28 0 682 212 27 65 chr20 10541330 10541514 -61612368 + MER5B DNA MER1_type 1 177 -1 1939 178 26 18 chr20 10541694 10542081 -61611801 - MLT1B LTR MaLR 0 390 1 520 340 72 0 chr20 10542374 10542583 -61611299 + MIR SINE MIR 8 231 -31 561 99 0 0 chr20 10543355 10543436 -61610446 + (TA)n Simple_repeat Simple_repeat 1 81 0 1242 188 33 112 chr20 10543656 10544050 -61609832 + MLT1A1 LTR MaLR 3 365 0 207 381 59 17 chr20 10544050 10544168 -61609714 + MIR3 SINE MIR 49 171 -37 1219 165 99 29 chr20 10544986 10545228 -61608654 + AluJo SINE Alu 6 264 -48 346 145 246 0 chr20 10545228 10545297 -61608585 + MER103 DNA DNA 8 93 -73 429 316 60 0 chr20 10546104 10546237 -61607645 + MIR SINE MIR 63 203 -59 326 335 78 35 chr20 10548381 10548638 -61605244 - L1ME4a LINE L1 -237 5884 5617 940 280 113 72 chr20 10548642 10549800 -61604082 - L1MC4a LINE L1 -1239 6569 5365 354 242 16 16 chr20 10549802 10549930 -61603952 + (TA)n Simple_repeat Simple_repeat 2 129 0 1593 172 35 38 chr20 10549967 10550333 -61603549 - MLT1A1 LTR MaLR 0 365 1 514 284 41 99 chr20 10550363 10550848 -61603034 - L1MC4a LINE L1 -824 5322 4866 990 299 61 45 chr20 10552236 10552797 -61601085 - L1MC4a LINE L1 -1923 5885 5316 494 337 136 47 chr20 10553013 10553113 -61600769 - L1MC4a LINE L1 -1088 5058 4968 499 271 96 66 chr20 10553113 10553508 -61600374 - MLT1I LTR MaLR -2 407 1 494 337 136 47 chr20 10553508 10554144 -61599738 - L1MC4a LINE L1 -1178 4968 4237 2348 69 0 44 chr20 10554144 10554464 -61599418 + AluY SINE Alu 1 306 -5 494 337 136 47 chr20 10554464 10554559 -61599323 - L1MC4a LINE L1 -1909 4237 4152 747 201 12 35 chr20 10554825 10554994 -61598888 + FRAM SINE Alu 1 165 -1 715 177 0 0 chr20 10555204 10555317 -61598565 + AluJb SINE Alu 136 248 -64 222 359 90 21 chr20 10555802 10555947 -61597935 + MIR3 SINE MIR 33 187 -21 1349 216 102 94 chr20 10556665 10557187 -61596695 - MLT1H LTR MaLR -23 526 1 1297 193 101 26 chr20 10557306 10557653 -61596229 - MER63B DNA MER1_type -63 373 1 246 245 0 0 chr20 10558659 10558712 -61595170 + L1MD3 LINE L1 6517 6569 -1426 22 35 0 0 chr20 10558741 10558770 -61595112 + AT_rich Low_complexity Low_complexity 1 29 0 3105 184 27 32 chr20 10558783 10558956 -61594926 + L1MC3 LINE L1 7060 7232 -553 2646 96 3 0 chr20 10558956 10559310 -61594572 - THE1A LTR MaLR 0 355 1 3105 184 27 32 chr20 10559310 10559830 -61594052 + L1MC3 LINE L1 7232 7750 -35 752 186 60 36 chr20 10559861 10560062 -61593820 + FAM SINE Alu 1 72 0 266 308 19 56 chr20 10560287 10560394 -61593488 + MIR3 SINE MIR 10 112 -96 2229 108 0 0 chr20 10561028 10561354 -61592528 - AluSq SINE Alu 0 326 1 308 162 86 38 chr20 10561390 10561495 -61592387 - L2 LINE L2 -126 3187 3078 1199 258 118 9 chr20 10561623 10562057 -61591825 - L1ME3A LINE L1 -238 5932 5452 39 0 0 0 chr20 10562084 10562123 -61591759 + AT_rich Low_complexity Low_complexity 1 39 0 22 56 0 0 chr20 10562216 10562252 -61591630 + AT_rich Low_complexity Low_complexity 1 36 0 1225 222 109 50 chr20 10562252 10562693 -61591189 + MLT1C LTR MaLR 1 467 0 1107 214 18 14 chr20 10562753 10563028 -61590854 + MER33 DNA MER1_type 48 323 -1 2094 122 7 7 chr20 10563333 10563637 -61590245 + AluSq SINE Alu 1 304 -9 248 282 94 12 chr20 10564195 10564280 -61589602 + MIR SINE MIR 100 191 -71 276 254 130 7 chr20 10564420 10564558 -61589324 + L1ME4a LINE L1 5967 6121 0 21 0 0 0 chr20 10564782 10564803 -61589079 + AT_rich Low_complexity Low_complexity 1 21 0 947 189 68 0 chr20 10566242 10566432 -61587450 + MER3 DNA MER1_type 6 208 -1 312 195 293 0 chr20 10566462 10566544 -61587338 + MER5A DNA MER1_type 49 154 -35 588 309 10 14 chr20 10567026 10567233 -61586649 - LTR16C LTR ERVL -1 490 285 369 0 0 0 chr20 10568521 10568562 -61585320 + (CA)n Simple_repeat Simple_repeat 2 42 0 261 0 0 0 chr20 10568584 10568618 -61585264 + (CA)n Simple_repeat Simple_repeat 1 63 0 261 0 0 0 chr20 10568618 10568647 -61585235 + (CA)n Simple_repeat Simple_repeat 2 30 0 1794 69 0 0 chr20 10568666 10568882 -61585000 - AluY SINE Alu 0 311 96 236 279 38 0 chr20 10568909 10568988 -61584894 + (TA)n Simple_repeat Simple_repeat 1 82 0 496 322 62 9 chr20 10569511 10569722 -61584160 + MLT2F LTR ERVL 196 417 -246 284 288 0 0 chr20 10569704 10569770 -61584112 + MLT2E LTR ERVL 202 267 -361 * 254 264 46 0 chr20 10569825 10569912 -61583970 + MLT2E LTR ERVL 519 609 -19 29 70 0 0 chr20 10570160 10570217 -61583665 + AT_rich Low_complexity Low_complexity 1 57 0 23 68 0 0 chr20 10570240 10570284 -61583598 + AT_rich Low_complexity Low_complexity 1 44 0 1994 179 6 8 chr20 10570980 10571343 -61582539 + MER47A DNA MER2_type 4 365 -1 226 301 55 0 chr20 10571707 10571780 -61582102 + MIR SINE MIR 118 194 -68 1230 206 41 4 chr20 10571989 10572232 -61581650 - L1PA16 LINE L1 -23 6143 5892 493 232 58 0 chr20 10573110 10573248 -61580634 - MER103 DNA DNA -13 153 8 541 268 159 19 chr20 10573332 10573489 -61580393 + MER5A DNA MER1_type 9 187 -2 302 214 22 0 chr20 10574085 10574174 -61579708 + L1MA10 LINE L1 6230 6320 -14 698 295 69 9 chr20 10574387 10574621 -61579261 + MIR SINE MIR 2 252 -10 405 268 56 56 chr20 10574682 10574861 -61579021 + L2 LINE L2 3103 3281 -32 23 0 0 0 chr20 10675529 10675552 -61478330 + AT_rich Low_complexity Low_complexity 1 23 0 1299 55 88 6 chr20 10675937 10676118 -61477764 - MER30 DNA MER1_type -34 196 1 391 233 0 0 chr20 10679150 10679236 -61474646 + MER33 DNA MER1_type 1 86 -238 2103 129 0 23 chr20 10679250 10679559 -61474323 + AluSx SINE Alu 1 302 -10 783 216 57 23 chr20 10679610 10679786 -61474096 - MER58A DNA MER1_type -42 182 1 682 159 0 32 chr20 10680098 10680224 -61473658 + FLAM_A SINE Alu 1 122 -11 745 154 0 39 chr20 10680527 10680657 -61473225 - FLAM_C SINE Alu -8 125 1 755 181 0 0 chr20 10680735 10680879 -61473003 + FLAM_A SINE Alu 1 144 0 263 240 103 34 chr20 10680892 10681067 -61472815 - HAL1 LINE L1 -78 2429 2243 696 181 0 0 chr20 10681160 10681276 -61472606 + FRAM SINE Alu 51 166 -10 801 248 27 19 chr20 10681276 10681534 -61472348 - HAL1 LINE L1 -394 2113 1854 1421 170 116 59 chr20 10681535 10681996 -61471886 + LTR48B LTR ERV1 2 561 -146 758 180 0 8 chr20 10681996 10682118 -61471764 - FLAM_A SINE Alu -12 121 1 1421 170 116 59 chr20 10682118 10682274 -61471608 + LTR48B LTR ERV1 561 707 0 1704 247 92 24 chr20 10682332 10683072 -61470810 - HAL1 LINE L1 -735 1772 983 1191 154 0 40 chr20 10683072 10683273 -61470609 + AluJb SINE Alu 103 295 -17 327 231 100 25 chr20 10683961 10684247 -61469635 + L1M4 LINE L1 1102 1775 -4354 408 292 121 53 chr20 10684327 10684783 -61469099 + MLT1H1 LTR MaLR 69 555 0 341 294 44 0 chr20 10684784 10684976 -61468906 + L1MEc LINE L1 1537 1720 -856 6199 96 20 3 chr20 10685635 10686699 -61467183 + L1PA11 LINE L1 5096 6174 0 857 165 0 0 chr20 10687078 10687211 -61466671 + FLAM_C SINE Alu 1 133 0 6152 207 47 19 chr20 10687218 10688415 -61465467 + L1M4 LINE L1 3495 4657 -1504 2354 92 0 19 chr20 10688415 10688731 -61465151 + AluSg SINE Alu 1 310 0 6152 207 47 19 chr20 10688731 10688769 -61465113 + L1M4 LINE L1 4657 4692 -1469 2167 137 26 0 chr20 10688769 10689120 -61464762 - MER46B DNA MER2_type 0 236 2 6152 207 47 19 chr20 10689120 10689145 -61464737 + L1M4 LINE L1 4692 4715 -1446 2033 127 0 3 chr20 10689145 10689476 -61464406 + AluSx SINE Alu 1 330 0 6152 207 47 19 chr20 10689476 10690467 -61463415 + L1M4 LINE L1 4715 5803 -358 1665 267 115 8 chr20 10690490 10691229 -61462653 + HAL1 LINE L1 404 1221 -1286 925 260 184 27 chr20 10691253 10691722 -61462160 + HAL1 LINE L1 1380 1774 -733 234 0 0 0 chr20 10691722 10691748 -61462134 + (CA)n Simple_repeat Simple_repeat 2 27 0 925 260 184 27 chr20 10691748 10692013 -61461869 + HAL1 LINE L1 1774 2229 -278 1548 163 0 101 chr20 10692152 10692374 -61461508 - AluJb SINE Alu 0 312 148 2394 91 7 0 chr20 10692374 10692672 -61461210 - AluSq SINE Alu -13 300 1 1548 163 0 101 chr20 10692672 10692807 -61461075 - AluJb SINE Alu -164 148 1 1121 169 86 36 chr20 10692961 10693066 -61460816 - MER33 DNA MER1_type -2269 316 218 2225 116 0 3 chr20 10693066 10693369 -61460513 - AluSg SINE Alu -8 302 1 1121 169 86 36 chr20 10693369 10693564 -61460318 - MER33 DNA MER1_type -2367 218 1 2133 124 3 0 chr20 10693596 10693894 -61459988 + AluSx SINE Alu 1 299 -13 236 298 149 7 chr20 10693898 10694005 -61459877 + MIR SINE MIR 102 235 -27 2445 47 0 3 chr20 10694005 10694302 -61459580 + AluY SINE Alu 2 297 -14 236 298 149 7 chr20 10694302 10694335 -61459547 + MIR SINE MIR 235 262 0 22 0 0 0 chr20 10695224 10695246 -61458636 + AT_rich Low_complexity Low_complexity 1 22 0 387 241 188 18 chr20 10696786 10697051 -61456831 + L1MD2 LINE L1 3587 3806 -2340 1897 137 16 22 chr20 10697051 10697365 -61456517 + AluJo SINE Alu 1 312 0 387 241 188 18 chr20 10697365 10697493 -61456389 + L1MD2 LINE L1 3806 4047 -2099 316 167 73 52 chr20 10697515 10697611 -61456271 + L1MD2 LINE L1 4349 4446 -1700 2774 189 97 20 chr20 10697886 10698623 -61455259 + L1MD2 LINE L1 4883 5719 -640 2269 116 0 0 chr20 10698623 10698924 -61454958 - AluSg SINE Alu -9 301 1 2774 189 97 20 chr20 10698924 10699104 -61454778 + L1MD2 LINE L1 5719 5884 -475 2251 107 0 3 chr20 10699130 10699428 -61454454 + AluSx SINE Alu 1 297 -15 2370 96 6 3 chr20 10699441 10699753 -61454129 + AluSq SINE Alu 1 313 0 1757 199 11 30 chr20 10700148 10700380 -61453502 + MLT1A1 LTR MaLR 1 225 -140 2374 93 0 0 chr20 10700380 10700681 -61453201 + AluSg SINE Alu 1 301 -9 1757 199 11 30 chr20 10700681 10700820 -61453062 + MLT1A1 LTR MaLR 225 365 0 2093 130 138 5 chr20 10700998 10701376 -61452506 - MSTA LTR MaLR 0 428 1 235 321 123 37 chr20 10701445 10701713 -61452169 + L2 LINE L2 2887 3177 -95 210 37 0 0 chr20 10701810 10701837 -61452045 + (TTTTTG)n Simple_repeat Simple_repeat 4 30 0 655 142 0 8 chr20 10703597 10703818 -61450064 - AluJb SINE Alu -8 304 1 736 192 24 0 chr20 10704047 10704172 -61449710 - FLAM_C SINE Alu -5 128 1 947 223 99 0 chr20 10704654 10704927 -61448955 + MER46C DNA MER2_type 5 304 -34 196 298 0 0 chr20 10704988 10705045 -61448837 + L3b LINE CR1 1350 1406 -177 2222 104 7 0 chr20 10705289 10705586 -61448296 - AluSp SINE Alu -14 299 1 290 279 193 0 chr20 10705781 10705916 -61447966 - MER5A DNA MER1_type 0 189 28 450 212 212 13 chr20 10705916 10706067 -61447815 - MER5A DNA MER1_type 0 189 9 37 0 0 0 chr20 10706116 10706153 -61447729 + AT_rich Low_complexity Low_complexity 1 37 0 980 175 0 0 chr20 10706451 10706611 -61447271 + FRAM SINE Alu 1 157 -19 482 126 39 48 chr20 10707147 10707230 -61446652 - MER53 DNA DNA 0 189 106 3250 158 40 21 chr20 10707230 10707862 -61446020 - LTR48B LTR ERV1 0 644 1 482 126 39 48 chr20 10707862 10707881 -61446001 - MER53 DNA DNA -83 106 88 185 387 0 13 chr20 10708101 10708176 -61445706 + MIR SINE MIR 23 96 -112 532 176 11 94 chr20 10708192 10708381 -61445501 - MER104 DNA Tc2 -5 175 2 366 326 15 0 chr20 10708725 10708857 -61445025 + (TCCA)n Simple_repeat Simple_repeat 1 134 0 1752 181 64 24 chr20 10709059 10709595 -61444287 + MER39 LTR ERV1 2 689 -18 6270 34 0 0 chr20 10709610 10710352 -61443530 - L1PA3 LINE L1 0 6155 5414 2333 269 93 38 chr20 10710527 10710850 -61443032 - L2 LINE L2 -145 3168 2864 2044 103 0 0 chr20 10710850 10711111 -61442771 + AluY SINE Alu 35 295 -16 2333 269 93 38 chr20 10711111 10711770 -61442112 - L2 LINE L2 -449 2864 2127 2015 257 53 51 chr20 10712110 10712179 -61441703 - MER21B LTR ERV1 -109 754 687 2512 145 5 2 chr20 10712179 10712580 -61441302 + MER57A LTR ERV1 2 403 0 2015 257 53 51 chr20 10712580 10712799 -61441083 - MER21B LTR ERV1 -176 687 470 2361 98 0 7 chr20 10712799 10713104 -61440778 + AluSg SINE Alu 1 303 -7 2015 257 53 51 chr20 10713104 10713564 -61440318 - MER21B LTR ERV1 -393 470 3 748 243 102 26 chr20 10713567 10713944 -61439938 + MLT1G3 LTR MaLR 1 401 -189 1734 168 7 26 chr20 10714032 10714342 -61439540 + AluJb SINE Alu 3 306 -6 348 317 10 0 chr20 10714512 10714616 -61439266 + MIR SINE MIR 48 152 -56 2215 117 7 0 chr20 10715544 10715844 -61438038 - AluSx SINE Alu -10 302 1 183 156 0 0 chr20 10716034 10716066 -61437816 + (TA)n Simple_repeat Simple_repeat 1 32 0 2308 233 75 42 chr20 10716156 10717146 -61436736 + L1ME3A LINE L1 5130 6159 -11 488 262 147 28 chr20 10717779 10717954 -61435928 - L1MC5 LINE L1 -54 7907 7754 306 0 0 0 chr20 10717954 10717988 -61435894 + (CA)n Simple_repeat Simple_repeat 2 35 0 488 262 147 28 chr20 10717988 10718201 -61435681 - L1MC5 LINE L1 -207 7754 7473 1901 107 50 11 chr20 10718235 10718516 -61435366 + AluSx SINE Alu 1 292 -20 768 280 60 4 chr20 10718692 10718908 -61434974 - MIR SINE MIR -10 252 21 1945 164 0 0 chr20 10718908 10719212 -61434670 - AluJo SINE Alu -8 304 1 768 280 60 4 chr20 10719212 10719227 -61434655 - MIR SINE MIR -241 21 8 2241 129 0 0 chr20 10719760 10720063 -61433819 + AluSx SINE Alu 1 303 -9 2707 105 3 0 chr20 10720613 10720976 -61432906 - THE1B LTR MaLR 0 364 1 289 209 157 17 chr20 10721248 10721363 -61432519 - L1ME4a LINE L1 0 6121 5991 1942 158 17 0 chr20 10722310 10722608 -61431274 - AluSx SINE Alu -9 303 1 273 119 0 0 chr20 10725715 10725757 -61428125 + (A)n Simple_repeat Simple_repeat 1 42 0 2859 116 113 0 chr20 10725761 10726211 -61427671 + MER61D LTR ERV1 1 501 0 244 167 17 50 chr20 10726257 10726317 -61427565 + L1M4 LINE L1 4105 4162 -1984 643 280 0 7 chr20 10726327 10726477 -61427405 + FRAM SINE Alu 4 152 -14 293 253 102 45 chr20 10726481 10726746 -61427136 + L1M4 LINE L1 4378 4657 -1489 287 242 30 0 chr20 10726746 10726812 -61427070 + L2 LINE L2 3246 3313 0 504 298 145 70 chr20 10726825 10726842 -61427040 + L2 LINE L2 2203 2217 -1055 2108 137 58 65 chr20 10726842 10726905 -61426977 - MSTB1 LTR MaLR -4 428 366 2250 111 3 9 chr20 10726905 10727220 -61426662 + AluSq SINE Alu 1 313 0 2108 137 58 65 chr20 10727220 10727233 -61426649 - MSTB1 LTR MaLR -66 366 354 2342 96 0 10 chr20 10727233 10727545 -61426337 + AluSc SINE Alu 1 309 0 2108 137 58 65 chr20 10727545 10727898 -61425984 - MSTB1 LTR MaLR -78 354 1 504 298 145 70 chr20 10727898 10728132 -61425750 + L2 LINE L2 2217 2432 -840 1638 179 33 0 chr20 10728132 10728434 -61425448 - AluJo SINE Alu 0 312 1 504 298 145 70 chr20 10728434 10728657 -61425225 + L2 LINE L2 2432 2637 -635 798 161 32 0 chr20 10728657 10728781 -61425101 + FLAM_C SINE Alu 1 128 -5 504 298 145 70 chr20 10728781 10729037 -61424845 + L2 LINE L2 2637 3000 -272 1654 192 65 0 chr20 10729100 10729392 -61424490 + AluSx SINE Alu 1 311 -1 181 171 229 133 chr20 10729491 10729519 -61424363 + L2 LINE L2 3199 3223 -90 2599 58 0 3 chr20 10729519 10729830 -61424052 - AluY SINE Alu -1 310 1 181 171 229 133 chr20 10729830 10729906 -61423976 + L2 LINE L2 3223 3313 0 572 131 0 0 chr20 10729987 10730071 -61423811 - AluJ/FRAM SINE Alu -13 299 216 215 196 143 0 chr20 10731191 10731247 -61422635 - MIR SINE MIR -12 250 187 360 0 0 0 chr20 10731325 10731365 -61422517 + (TTA)n Simple_repeat Simple_repeat 2 41 0 10244 37 7 103 chr20 10731380 10732914 -61420968 - SVA Other Other 0 1386 1 374 311 80 22 chr20 10733340 10733989 -61419893 + L1M4 LINE L1 4371 5057 -1089 481 328 103 27 chr20 10734165 10734573 -61419309 + L1M4 LINE L1 5257 5695 -483 538 263 26 13 chr20 10734667 10734823 -61419059 - LTR16A1 LTR ERVL -299 158 1 1930 174 3 0 chr20 10735071 10735376 -61418506 - AluSx SINE Alu -6 306 1 909 152 9 3 chr20 10735645 10735876 -61418006 - MER2 DNA MER2_type 0 345 59 1144 213 117 46 chr20 10735982 10736418 -61417464 + MLT1C LTR MaLR 1 467 0 469 260 83 71 chr20 10736990 10737208 -61416674 + L1ME4a LINE L1 5612 5839 -282 723 103 0 0 chr20 10737208 10737315 -61416567 + L1MA3 LINE L1 6198 6304 -1 469 260 83 71 chr20 10737315 10737519 -61416363 + L1ME4a LINE L1 5839 6039 -82 183 42 0 0 chr20 10737520 10737544 -61416338 + (TG)n Simple_repeat Simple_repeat 2 25 0 29 0 0 0 chr20 10737586 10737615 -61416267 + AT_rich Low_complexity Low_complexity 1 29 0 2495 71 6 0 chr20 10737618 10737929 -61415953 + AluSp SINE Alu 1 313 0 1290 232 125 27 chr20 10739964 10740466 -61413416 - MLT1F1 LTR MaLR -2 565 1 330 201 49 183 chr20 10740466 10740690 -61413192 - MLT1F1-int LTR MaLR -41 1330 1137 355 178 133 11 chr20 10740780 10740870 -61413012 - MLT1E LTR MaLR -492 101 1 1266 158 29 5 chr20 10741412 10741621 -61412261 + MER20 DNA MER1_type 4 217 -2 23 0 0 0 chr20 10742109 10742132 -61411750 + AT_rich Low_complexity Low_complexity 1 23 0 2046 141 39 0 chr20 10743388 10743722 -61410160 + MER7A DNA MER2_type 2 346 0 22 94 0 0 chr20 10744145 10744209 -61409673 + AT_rich Low_complexity Low_complexity 1 64 0 303 152 0 15 chr20 10744545 10744611 -61409271 + L1PA13 LINE L1 6096 6160 -3 2425 82 6 22 chr20 10746776 10747091 -61406791 + AluSx SINE Alu 1 310 -2 231 275 92 69 chr20 10747266 10747397 -61406485 + MIR SINE MIR 35 168 -94 2136 113 14 3 chr20 10747434 10747727 -61406155 + AluSx SINE Alu 1 296 -16 2211 87 17 7 chr20 10748080 10748369 -61405513 - AluSc SINE Alu -17 292 1 664 194 40 0 chr20 10748370 10748494 -61405388 - FLAM_A SINE Alu -4 129 1 226 250 59 15 chr20 10749025 10749093 -61404789 - L2 LINE L2 -8 3264 3194 2295 97 3 0 chr20 10751351 10751649 -61402233 - AluSp SINE Alu -13 300 2 793 226 78 94 chr20 10753366 10753856 -61400026 + L1MC5 LINE L1 6725 7206 -755 1020 237 9 9 chr20 10753867 10754086 -61399796 + MER58A DNA MER1_type 5 223 -1 1458 115 28 14 chr20 10754133 10754351 -61399531 + AluSg/x SINE Alu 80 300 -10 1616 186 4 0 chr20 10754414 10754688 -61399194 + AluJo SINE Alu 1 275 -37 308 113 0 81 chr20 10754688 10754750 -61399132 + AluJo/FRAM SINE Alu 201 257 -45 378 289 145 38 chr20 10754837 10755367 -61398515 + L1MC5 LINE L1 7268 7854 -107 478 255 19 66 chr20 10756346 10756558 -61397324 - MER46C DNA MER2_type 0 338 137 902 116 0 20 chr20 10756568 10756714 -61397168 - Tigger7 DNA MER2_type -6 2581 2439 * 1595 193 72 0 chr20 10756709 10757030 -61396852 - Tigger7 DNA MER2_type -389 344 1 488 202 101 8 chr20 10757031 10757150 -61396732 - MER46C DNA MER2_type -207 131 2 35 0 0 0 chr20 10758196 10758231 -61395651 + AT_rich Low_complexity Low_complexity 1 35 0 1961 139 45 0 chr20 10758233 10758521 -61395361 + AluSx SINE Alu 1 301 -11 32 0 0 0 chr20 10758856 10758888 -61394994 + AT_rich Low_complexity Low_complexity 1 32 0 2525 61 0 0 chr20 10759799 10760096 -61393786 - AluY SINE Alu -14 297 1 1304 200 76 17 chr20 10760240 10760530 -61393352 + AluJb SINE Alu 1 307 -5 29 46 0 31 chr20 10761313 10761359 -61392523 + AT_rich Low_complexity Low_complexity 1 46 -17 720 174 8 30 chr20 10761359 10761491 -61392391 + FLAM_C SINE Alu 1 129 -4 29 46 0 31 chr20 10761491 10761509 -61392373 + AT_rich Low_complexity Low_complexity 46 63 0 2460 84 0 3 chr20 10761855 10762165 -61391717 + AluSq SINE Alu 1 309 -4 1840 129 35 3 chr20 10763494 10763780 -61390102 - AluSx SINE Alu -13 299 5 459 0 0 0 chr20 10764115 10764166 -61389716 + (CA)n Simple_repeat Simple_repeat 2 52 0 1938 132 3 21 chr20 10765642 10765951 -61387931 + AluSx SINE Alu 1 304 0 288 360 130 24 chr20 10766379 10766873 -61387009 + L2 LINE L2 2063 2644 -670 936 205 27 5 chr20 10766873 10767058 -61386824 + MER5A DNA MER1_type 1 189 0 288 360 130 24 chr20 10767058 10767219 -61386663 + L2 LINE L2 2644 2787 -527 656 270 149 18 chr20 10767318 10767540 -61386342 + MIR SINE MIR 12 262 0 364 261 236 6 chr20 10768051 10768212 -61385670 + MIR SINE MIR 65 262 0 405 0 0 0 chr20 10768613 10768658 -61385224 + (CAAAC)n Simple_repeat Simple_repeat 2 46 0 354 259 77 14 chr20 10768910 10769053 -61384829 + L2 LINE L2 2982 3133 -180 1241 251 101 7 chr20 10769058 10769464 -61384418 + LTR16A LTR ERVL 1 444 -6 1558 145 29 71 chr20 10769501 10769596 -61384286 + MER2 DNA MER2_type 1 99 -246 2040 92 30 20 chr20 10769596 10769901 -61383981 + AluSx SINE Alu 1 308 -4 1558 145 29 71 chr20 10769901 10770091 -61383791 + MER2 DNA MER2_type 99 271 -74 1816 131 20 7 chr20 10770091 10770389 -61383493 - AluSx SINE Alu -10 302 1 1558 145 29 71 chr20 10770389 10770453 -61383429 + MER2 DNA MER2_type 271 336 -9 313 306 91 88 chr20 10770925 10771343 -61382539 + L1M2 LINE L1 276 694 -6155 279 250 183 10 chr20 10772917 10773021 -61380861 - L2 LINE L2 0 3313 3192 26 30 0 0 chr20 10773122 10773155 -61380727 + AT_rich Low_complexity Low_complexity 1 33 0 402 240 19 0 chr20 10773268 10773372 -61380510 + MER5A DNA MER1_type 4 109 -80 2193 96 7 0 chr20 10773438 10773740 -61380142 - AluSx SINE Alu -8 304 1 847 240 5 0 chr20 10774199 10774391 -61379491 - AluJo SINE Alu 0 312 120 295 210 74 25 chr20 10774408 10774489 -61379393 - MER5B DNA MER1_type 0 178 94 192 299 39 13 chr20 10774678 10774755 -61379127 + MIR SINE MIR 68 146 -116 827 270 117 4 chr20 10774908 10775138 -61378744 + MIR SINE MIR 2 257 -5 613 148 106 0 chr20 10775325 10775339 -61378543 - L1MA10 LINE L1 -3 6331 6318 499 196 134 46 chr20 10775339 10775533 -61378349 - L1ME2 LINE L1 -9 6155 5945 1992 131 40 14 chr20 10775558 10775855 -61378027 - AluSx SINE Alu -7 305 1 736 149 35 21 chr20 10775950 10776091 -61377791 - FLAM_C SINE Alu 0 143 1 542 231 0 7 chr20 10776093 10776240 -61377642 - L1ME2 LINE L1 -298 5868 5723 1784 167 20 3 chr20 10776295 10776595 -61377287 - AluJb SINE Alu -7 305 1 2141 140 0 10 chr20 10777258 10777572 -61376310 + AluSx SINE Alu 1 311 -1 376 264 65 69 chr20 10777585 10777801 -61376081 - L1ME1 LINE L1 -17 6149 5935 506 294 92 43 chr20 10777967 10778173 -61375709 - MIR SINE MIR -17 245 48 1269 152 0 5 chr20 10778238 10778429 -61375453 + AluJo SINE Alu 1 190 -122 315 299 9 28 chr20 10778440 10778547 -61375335 - L2 LINE L2 0 3313 3209 264 397 64 19 chr20 10779252 10779408 -61374474 + L2 LINE L2 3107 3269 -3 433 259 63 60 chr20 10780554 10780746 -61373136 + MIR SINE MIR 24 213 -49 199 262 0 0 chr20 10781653 10781695 -61372187 - L2 LINE L2 -18 3295 3254 992 149 58 0 chr20 10782490 10782664 -61371218 + MER5A DNA MER1_type 6 189 0 1372 159 0 0 chr20 10783713 10783921 -61369961 + MER46A DNA MER2_type 28 235 -1 247 308 42 42 chr20 10784042 10784162 -61369720 - MLT1K LTR MaLR -91 497 378 553 262 198 16 chr20 10784620 10784872 -61369010 - L2 LINE L2 -4 3309 3012 21 0 0 0 chr20 10786188 10786209 -61367673 + AT_rich Low_complexity Low_complexity 1 21 0 260 294 43 80 chr20 10786225 10786389 -61367493 - MIR SINE MIR -27 181 16 229 271 19 65 chr20 10786485 10786592 -61367290 + MER102a DNA MER1_type 221 322 -8 1289 173 19 71 chr20 10786805 10786886 -61366996 - Charlie4a DNA MER1_type -1469 492 408 273 29 0 0 chr20 10786886 10786920 -61366962 + (TAAAA)n Simple_repeat Simple_repeat 1 34 0 1512 178 6 116 chr20 10786929 10787266 -61366616 + AluJo SINE Alu 2 301 -1 1289 173 19 71 chr20 10787266 10787498 -61366384 - Charlie4a DNA MER1_type -1561 400 186 442 250 194 77 chr20 10787609 10788001 -61365881 - MLT1H LTR MaLR -5 544 107 354 23 0 0 chr20 10788966 10789009 -61364873 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 1107 268 80 48 chr20 10789036 10789510 -61364372 - LTR16C LTR ERVL 0 491 3 635 308 72 0 chr20 10789622 10789843 -61364039 - MIR SINE MIR -12 250 14 2111 104 18 0 chr20 10790640 10790950 -61362932 + AluSx SINE Alu 1 315 0 201 225 135 22 chr20 10791340 10791429 -61362453 - L2 LINE L2 -163 3150 3052 361 299 22 15 chr20 10791589 10791723 -61362159 - MIR SINE MIR -36 226 92 2030 238 65 48 chr20 10791926 10792556 -61361326 - MLT1E1 LTR MaLR 0 654 14 646 325 130 12 chr20 10793395 10793943 -61359939 - L2 LINE L2 -7 3306 2686 828 239 66 66 chr20 10794179 10794573 -61359309 - LTR16A1 LTR ERVL -63 394 1 517 217 9 9 chr20 10795118 10795224 -61358658 + MER5B DNA MER1_type 1 106 -72 2768 216 46 27 chr20 10795226 10795857 -61358025 - L1MD3 LINE L1 0 7995 7353 414 269 120 42 chr20 10795986 10796202 -61357680 + MIR SINE MIR 28 260 -2 1061 260 29 4 chr20 10796374 10796620 -61357262 - MIR SINE MIR -10 252 1 2322 115 0 0 chr20 10796731 10797043 -61356839 - AluSx SINE Alu 0 312 1 229 313 38 0 chr20 10798251 10798331 -61355551 + (CGTG)n Simple_repeat Simple_repeat 3 85 0 226 175 25 0 chr20 10798841 10798881 -61355001 - MIR SINE MIR -9 253 213 183 295 116 11 chr20 10798917 10799012 -61354870 + MIR3 SINE MIR 85 189 -19 624 211 22 56 chr20 10799812 10800084 -61353798 - MLT1H LTR MaLR -4 590 230 309 185 87 0 chr20 10800357 10800449 -61353433 - L1ME4a LINE L1 -1 6120 6021 21 36 0 0 chr20 10800460 10800488 -61353394 + AT_rich Low_complexity Low_complexity 1 28 0 714 231 140 32 chr20 10800541 10800762 -61353120 - MIR SINE MIR -12 250 6 779 251 50 0 chr20 10800773 10800952 -61352930 - MER5A DNA MER1_type 0 189 2 307 276 48 9 chr20 10800956 10801061 -61352821 - MIR SINE MIR -82 180 72 652 207 64 7 chr20 10801651 10801791 -61352091 + MER5A DNA MER1_type 14 161 -28 907 218 11 0 chr20 10801911 10802085 -61351797 - MER5A DNA MER1_type -6 183 8 2272 137 39 0 chr20 10802737 10803072 -61350810 + MER7A DNA MER2_type 1 346 0 799 255 42 8 chr20 10804164 10804423 -61349459 - LTR37B LTR ERV1 -3 465 198 580 235 31 56 chr20 10804467 10804517 -61349365 - LTR37B LTR ERV1 -272 196 146 614 209 33 0 chr20 10804517 10804670 -61349212 + L1MA10 LINE L1 6177 6334 0 580 235 31 56 chr20 10804670 10804815 -61349067 - LTR37B LTR ERV1 -322 146 6 629 247 16 47 chr20 10804863 10805053 -61348829 + MIR SINE MIR 69 252 -10 704 246 27 16 chr20 10805382 10805565 -61348317 + MIR SINE MIR 42 226 -36 710 291 65 12 chr20 10806216 10806524 -61347358 + LTR16A1 LTR ERVL 153 455 -2 189 74 0 0 chr20 10807459 10807486 -61346396 + (CA)n Simple_repeat Simple_repeat 2 28 0 642 246 62 124 chr20 10808564 10809016 -61344866 + L1ME4a LINE L1 5543 5966 -155 819 190 29 23 chr20 10809028 10809202 -61344680 - MER5B DNA MER1_type 0 178 4 2144 121 0 38 chr20 10809303 10809446 -61344436 + AluSx SINE Alu 3 150 -162 2394 70 17 0 chr20 10809446 10809747 -61344135 + AluSp SINE Alu 1 306 -7 2144 121 0 38 chr20 10809747 10809917 -61343965 + AluSx SINE Alu 150 304 -8 1500 167 124 70 chr20 10809987 10810413 -61343469 + LTR37B LTR ERV1 6 454 -14 1774 185 7 0 chr20 10811541 10811849 -61342033 - AluJo SINE Alu -2 310 1 359 303 124 22 chr20 10811917 10812102 -61341780 - L3 LINE CR1 -1 1576 1373 440 225 8 67 chr20 10812476 10812596 -61341286 + MER5A DNA MER1_type 2 114 -75 444 19 0 0 chr20 10812701 10812754 -61341128 + (CA)n Simple_repeat Simple_repeat 2 54 0 272 287 89 0 chr20 10813140 10813241 -61340641 - L3 LINE CR1 -335 1242 1133 197 266 174 37 chr20 10814353 10814462 -61339420 + MIR3 SINE MIR 82 205 -3 930 227 22 64 chr20 10814630 10814943 -61338939 - LTR16A1 LTR ERVL 0 457 158 2555 58 0 3 chr20 10815022 10815331 -61338551 - AluY SINE Alu -3 308 1 216 197 105 53 chr20 10815797 10815873 -61338009 + L2 LINE L2 3192 3271 -1 238 243 97 19 chr20 10816786 10816889 -61336993 - MER5A DNA MER1_type -24 165 55 196 286 124 57 chr20 10816807 10816912 -61336970 + MER5A DNA MER1_type 56 167 -22 * 643 62 0 0 chr20 10816931 10817011 -61336871 - Alu SINE Alu -9 300 221 363 200 200 0 chr20 10817890 10817975 -61335907 - MER5A DNA MER1_type -84 105 4 544 320 88 41 chr20 10818698 10819404 -61334478 + L1M4 LINE L1 2401 3139 -3007 2099 101 4 0 chr20 10819553 10819862 -61334020 - AluSc SINE Alu 0 310 1 359 289 27 27 chr20 10819996 10820145 -61333737 + MIR SINE MIR 113 261 -1 1894 132 30 7 chr20 10821141 10821437 -61332445 + AluSx SINE Alu 1 303 -9 1607 189 68 12 chr20 10821612 10821934 -61331948 - MER58B DNA MER1_type -1 340 1 2333 89 3 3 chr20 10821984 10822288 -61331594 + AluSp SINE Alu 1 304 -9 689 245 15 51 chr20 10822355 10822429 -61331453 + MER5A DNA MER1_type 1 76 -113 2197 118 3 3 chr20 10822429 10822735 -61331147 + AluSx SINE Alu 1 306 -6 689 245 15 51 chr20 10822735 10822856 -61331026 + MER5A DNA MER1_type 76 189 0 209 278 0 56 chr20 10822923 10822995 -61330887 - L2 LINE L2 -1 3271 3204 284 48 24 0 chr20 10823730 10823772 -61330110 + (GA)n Simple_repeat Simple_repeat 1 43 0 386 308 107 0 chr20 10824260 10824419 -61329463 - MIR SINE MIR -73 189 14 334 308 72 14 chr20 10825383 10825548 -61328334 - MLT1J1 LTR MaLR -2 444 276 647 216 40 0 chr20 10826035 10826160 -61327722 + L2 LINE L2 3141 3270 -2 1269 230 8 59 chr20 10826386 10826574 -61327308 + L1ME2 LINE L1 5789 5948 -216 2580 60 0 0 chr20 10826574 10826875 -61327007 + AluY SINE Alu 1 301 -10 1269 230 8 59 chr20 10826875 10827073 -61326809 + L1ME2 LINE L1 5948 6155 -9 405 0 0 0 chr20 10827082 10827127 -61326755 + (TAAA)n Simple_repeat Simple_repeat 1 45 0 1664 176 47 3 chr20 10827860 10828179 -61325703 - MER63C DNA MER1_type 0 932 600 710 182 8 8 chr20 10828181 10828302 -61325580 + FLAM_A SINE Alu 1 121 -21 3009 178 46 7 chr20 10828317 10828901 -61324981 - MER63C DNA MER1_type -323 607 1 25 0 0 0 chr20 10833085 10833110 -61320772 + AT_rich Low_complexity Low_complexity 1 25 0 506 309 13 7 chr20 10833540 10833689 -61320193 - MIR SINE MIR -105 157 8 282 236 88 59 chr20 10833875 10834049 -61319833 - MIR SINE MIR -60 148 10 875 49 0 16 chr20 10834146 10834268 -61319614 + (GGAA)n Simple_repeat Simple_repeat 4 123 0 324 341 58 7 chr20 10834324 10834462 -61319420 - MIR3 SINE MIR -62 146 2 411 213 75 0 chr20 10834957 10835051 -61318831 + MER5A DNA MER1_type 9 109 -80 589 295 35 46 chr20 10835193 10835451 -61318431 - MIR SINE MIR -11 251 1 470 313 89 38 chr20 10837851 10838222 -61315660 + L1ME LINE L1 5429 5818 -303 466 332 8 10 chr20 10838305 10838659 -61315223 - LTR16B LTR ERVL -12 452 59 8258 25 0 0 chr20 10839076 10840182 -61313700 + L1PA3 LINE L1 5046 6152 -3 29 0 0 0 chr20 10840182 10840211 -61313671 + AT_rich Low_complexity Low_complexity 1 29 0 233 116 0 47 chr20 10841603 10841646 -61312236 - MER3 DNA MER1_type -18 191 151 21 0 0 0 chr20 10843067 10843088 -61310794 + AT_rich Low_complexity Low_complexity 1 21 0 2123 115 7 14 chr20 10843092 10843388 -61310494 - AluSq SINE Alu -19 294 1 198 103 0 0 chr20 10845050 10845079 -61308803 + (T)n Simple_repeat Simple_repeat 1 29 0 501 276 190 21 chr20 10849085 10849469 -61304413 - MLT1H LTR MaLR 0 549 101 * 1272 265 137 7 chr20 10849459 10849896 -61303986 - LTR33 LTR ERVL -18 503 10 677 232 22 61 chr20 10850079 10850260 -61303622 + MER5B DNA MER1_type 5 178 0 286 330 47 98 chr20 10851622 10851940 -61301942 - L2 LINE L2 -5 3267 2966 289 99 62 0 chr20 10853851 10853932 -61299950 + (TA)n Simple_repeat Simple_repeat 1 86 0 919 142 0 37 chr20 10854111 10854273 -61299609 + FRAM SINE Alu 20 175 -1 225 257 43 29 chr20 10854356 10854426 -61299456 + MIR SINE MIR 21 91 -171 226 266 16 0 chr20 10856044 10856108 -61297774 - MIR SINE MIR -16 246 182 428 327 37 25 chr20 10856120 10856282 -61297600 + MIR SINE MIR 6 169 -93 1430 131 89 0 chr20 10856333 10856569 -61297313 - Tigger2 DNA MER2_type 0 2718 2462 3924 154 48 14 chr20 10856639 10857272 -61296610 - Tigger2 DNA MER2_type -2006 712 53 1852 185 0 0 chr20 10857272 10857574 -61296308 + AluJo SINE Alu 1 302 -10 3924 154 48 14 chr20 10857574 10857629 -61296253 - Tigger2 DNA MER2_type -2665 53 1 21 36 0 0 chr20 10857872 10857900 -61295982 + AT_rich Low_complexity Low_complexity 1 28 0 197 65 32 0 chr20 10858831 10858862 -61295020 + (CAA)n Simple_repeat Simple_repeat 2 33 0 21 0 0 0 chr20 10859278 10859299 -61294583 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr20 10859402 10859424 -61294458 + AT_rich Low_complexity Low_complexity 1 22 0 2247 173 77 26 chr20 10859845 10860270 -61293612 - L1MB7 LINE L1 0 6184 5727 2067 105 3 68 chr20 10860270 10860593 -61293289 - AluSx SINE Alu -10 302 1 2247 173 77 26 chr20 10860593 10860675 -61293207 - L1MB7 LINE L1 -457 5727 5651 243 224 0 0 chr20 10860706 10860782 -61293100 + (CCA)n Simple_repeat Simple_repeat 3 78 0 334 234 0 21 chr20 10860871 10861012 -61292870 + (CCA)n Simple_repeat Simple_repeat 2 139 0 402 297 74 55 chr20 10861941 10862143 -61291739 - MIR SINE MIR -27 235 30 607 269 34 97 chr20 10862296 10862549 -61291333 - L2 LINE L2 0 3313 3083 1653 175 18 105 chr20 10862549 10862948 -61290934 - MLT1A1 LTR MaLR 0 365 2 607 269 34 97 chr20 10862948 10863014 -61290868 - L2 LINE L2 -230 3083 3014 1276 245 31 22 chr20 10863810 10864165 -61289717 + LTR16C LTR ERVL 134 491 0 2066 243 90 2 chr20 10865176 10865678 -61288204 - MLT1H LTR MaLR -3 546 1 267 301 20 59 chr20 10866843 10866996 -61286886 - LTR16C LTR ERVL -14 477 331 207 283 0 0 chr20 10867623 10867669 -61286213 + polypurine Low_complexity Low_complexity 3 48 0 23 33 0 0 chr20 10867733 10867763 -61286119 + AT_rich Low_complexity Low_complexity 1 30 0 1457 130 39 0 chr20 10867998 10868228 -61285654 + AluSq SINE Alu 72 310 -3 2365 246 56 18 chr20 10868823 10868961 -61284921 + L1ME3A LINE L1 5518 5649 -521 1353 234 0 0 chr20 10868961 10869200 -61284682 + MER8 DNA MER2_type 1 239 0 2365 246 56 18 chr20 10869200 10869690 -61284192 + L1ME3A LINE L1 5649 6170 0 1253 255 90 28 chr20 10869871 10870338 -61283544 - LTR33 LTR ERVL 0 521 26 596 286 106 61 chr20 10870982 10871359 -61282523 - LTR16C LTR ERVL -2 489 96 445 348 105 21 chr20 10871652 10872034 -61281848 + L2 LINE L2 1932 2345 -969 598 232 158 29 chr20 10872664 10872910 -61280972 - MLT1H LTR MaLR 0 549 272 2428 192 111 8 chr20 10873248 10873754 -61280128 + MLT1F1 LTR MaLR 4 561 -6 192 191 24 0 chr20 10874815 10874857 -61279025 - L2 LINE L2 -213 3059 3017 1291 235 107 26 chr20 10874939 10875221 -61278661 - MLT1D LTR MaLR -1 504 169 1955 148 10 13 chr20 10875221 10875532 -61278350 - AluSx SINE Alu -2 310 1 1291 235 107 26 chr20 10875532 10875708 -61278174 - MLT1D LTR MaLR -336 169 9 204 355 54 43 chr20 10875784 10875970 -61277912 - L2 LINE L2 -474 2840 2653 1116 221 60 28 chr20 10876328 10876645 -61277237 + LTR16A1 LTR ERVL 128 454 -3 886 199 34 6 chr20 10877110 10877286 -61276596 + MER5A DNA MER1_type 9 189 0 2297 101 0 0 chr20 10877358 10877656 -61276226 + AluY SINE Alu 1 298 -13 328 241 7 0 chr20 10877835 10877932 -61275950 + L1MC/D LINE L1 5731 5828 -299 225 217 60 12 chr20 10878073 10878156 -61275726 + (CATATA)n Simple_repeat Simple_repeat 3 89 0 1782 156 4 4 chr20 10878181 10878444 -61275438 + AluJb SINE Alu 4 266 -46 201 74 0 0 chr20 10878453 10878480 -61275402 + (CA)n Simple_repeat Simple_repeat 2 28 0 726 321 78 35 chr20 10878599 10879077 -61274805 - L2 LINE L2 -26 3287 2831 2114 129 13 0 chr20 10879077 10879379 -61274503 - AluSx SINE Alu -6 306 1 726 321 78 35 chr20 10879379 10879627 -61274255 - L2 LINE L2 -482 2831 2520 2200 123 0 0 chr20 10879627 10879920 -61273962 - AluSx SINE Alu -19 293 1 726 321 78 35 chr20 10879920 10879949 -61273933 - L2 LINE L2 -793 2520 2494 702 274 60 41 chr20 10879975 10880293 -61273589 - MLT1H LTR MaLR -195 354 31 2305 65 3 0 chr20 10880581 10880874 -61273008 - AluY SINE Alu -17 294 1 989 182 32 27 chr20 10882705 10882892 -61270990 + MER5A DNA MER1_type 2 189 0 1862 152 0 10 chr20 10883788 10884077 -61269805 - AluJo SINE Alu -15 297 12 241 287 56 28 chr20 10884099 10884207 -61269675 - MLT1J LTR MaLR 0 511 401 237 200 0 0 chr20 10884265 10884305 -61269577 - MLT1J LTR MaLR -201 310 271 220 347 79 41 chr20 10884365 10884734 -61269148 - L2 LINE L2 -1199 2115 1733 1635 191 126 7 chr20 10885919 10886349 -61267533 + L1M4 LINE L1 4822 5302 -844 2106 143 0 0 chr20 10887230 10887537 -61266345 + AluSx SINE Alu 1 307 -5 2045 144 10 0 chr20 10887600 10887899 -61265983 - AluSx SINE Alu -10 302 1 1100 132 17 6 chr20 10888156 10888330 -61265552 + MLT1B LTR MaLR 215 390 0 291 167 25 142 chr20 10889293 10889413 -61264469 + LTR37A LTR ERV1 8 113 -313 2080 177 23 23 chr20 10889432 10889827 -61264055 - L1MB7 LINE L1 -92 6092 5698 926 210 69 34 chr20 10890038 10890300 -61263582 + LTR37A LTR ERV1 151 421 -5 459 169 43 119 chr20 10891257 10891535 -61262347 - LTR37B LTR ERV1 -3 465 209 937 175 63 53 chr20 10891737 10891943 -61261939 + MER58A DNA MER1_type 1 208 -16 2190 181 78 2 chr20 10891965 10892363 -61261519 - MSTA LTR MaLR 0 428 1 312 27 0 0 chr20 10892415 10892452 -61261430 + (T)n Simple_repeat Simple_repeat 1 37 0 22 0 0 0 chr20 10892923 10892945 -61260937 + AT_rich Low_complexity Low_complexity 1 22 0 495 213 0 11 chr20 10892950 10893044 -61260838 - FLAM_A SINE Alu -27 115 23 7335 174 154 23 chr20 10893045 10894597 -61259285 + MER52A LTR ERV1 1 1755 0 660 284 72 54 chr20 10895483 10895887 -61257995 + LTR16C LTR ERVL 6 491 0 257 213 100 0 chr20 10896021 10896101 -61257781 - L1MC4 LINE L1 -1338 6704 6617 22 70 0 0 chr20 10896166 10896209 -61257673 + AT_rich Low_complexity Low_complexity 1 43 0 1683 98 8 4 chr20 10896278 10896512 -61257370 - AluSq SINE Alu -41 272 38 976 249 93 35 chr20 10897746 10898091 -61255791 + MLT1A1 LTR MaLR 1 365 0 202 278 167 0 chr20 10898701 10898809 -61255073 + MIR SINE MIR 130 255 -7 939 175 84 0 chr20 10899162 10899328 -61254554 - MLT1F1 LTR MaLR -1 566 387 225 0 0 0 chr20 10899370 10899395 -61254487 + (TC)n Simple_repeat Simple_repeat 2 26 0 408 55 0 0 chr20 10899617 10899672 -61254210 + (CA)n Simple_repeat Simple_repeat 2 56 0 24 53 0 0 chr20 10899766 10899804 -61254078 + AT_rich Low_complexity Low_complexity 1 38 0 189 0 0 0 chr20 10900197 10900218 -61253664 + (CA)n Simple_repeat Simple_repeat 2 22 0 388 254 64 9 chr20 10900771 10900881 -61253001 + L2 LINE L2 3191 3306 -7 847 206 23 11 chr20 10900943 10901118 -61252764 - MLT1C LTR MaLR 0 467 291 804 221 90 67 chr20 10901652 10901951 -61251931 - MLT1C LTR MaLR -161 306 1 238 317 58 29 chr20 10901973 10902077 -61251805 - L2 LINE L2 0 3272 3166 21 0 0 0 chr20 10902118 10902139 -61251743 + AT_rich Low_complexity Low_complexity 1 21 0 260 269 128 13 chr20 10902444 10902522 -61251360 - LTR16C LTR ERVL 0 491 405 1916 100 89 0 chr20 10902656 10902927 -61250955 - AluSg SINE Alu -15 295 1 391 174 12 12 chr20 10902927 10903013 -61250869 + MER41B LTR ERV1 512 597 -38 1538 242 56 97 chr20 10903032 10903591 -61250291 - MER21B LTR ERV1 -19 586 20 991 92 0 8 chr20 10903592 10903723 -61250159 - AluSp/q SINE Alu -15 298 169 2250 105 3 3 chr20 10903916 10904211 -61249671 + AluSx SINE Alu 1 295 -17 3348 156 74 15 chr20 10904233 10904817 -61249065 - LTR35 LTR ERV1 0 618 1 2359 103 0 0 chr20 10906008 10906308 -61247574 - AluSg SINE Alu -10 300 1 335 231 39 67 chr20 10906456 10906560 -61247322 - MIR SINE MIR -65 197 97 1419 181 32 48 chr20 10906700 10907010 -61246872 - AluJo SINE Alu -2 310 6 223 366 149 0 chr20 10907463 10907597 -61246285 + MIR SINE MIR 47 200 -62 952 124 0 8 chr20 10908432 10908561 -61245321 - FLAM_C SINE Alu -5 128 1 349 259 72 22 chr20 10908709 10908848 -61245034 + MLT1J2 LTR MaLR 1 146 -304 542 282 11 52 chr20 10908918 10909092 -61244790 + MLT1J2 LTR MaLR 271 437 -13 1111 186 74 63 chr20 10909096 10909163 -61244719 + MLT2B3 LTR ERVL 1 66 -488 2149 133 45 48 chr20 10909163 10909539 -61244343 - THE1C LTR MaLR 0 375 1 1111 186 74 63 chr20 10909539 10909740 -61244142 + MLT2B3 LTR ERVL 66 272 -282 255 171 0 0 chr20 10909740 10909781 -61244101 + MLT2B3 LTR ERVL 472 512 -8 918 231 6 0 chr20 10909826 10910008 -61243874 + MER58A DNA MER1_type 42 224 0 1734 178 7 23 chr20 10910298 10910602 -61243280 + AluJb SINE Alu 1 299 -13 331 295 26 6 chr20 10910605 10910761 -61243121 + L1ME3A LINE L1 5789 5947 -223 3549 46 5 2 chr20 10910846 10911287 -61242595 + L1PA7 LINE L1 5736 6177 0 26 0 0 0 chr20 10911448 10911474 -61242408 + AT_rich Low_complexity Low_complexity 1 26 0 2038 204 43 87 chr20 10913128 10913227 -61240655 - MER92C LTR ERV1 -2 552 450 2065 122 14 0 chr20 10913227 10913515 -61240367 - AluY SINE Alu -19 292 1 2038 204 43 87 chr20 10913515 10913992 -61239890 - MER92C LTR ERV1 -104 450 1 288 310 10 0 chr20 10914307 10914407 -61239475 + MIR SINE MIR 109 209 -53 470 238 166 13 chr20 10914411 10914562 -61239320 - MER5A DNA MER1_type -6 183 10 1476 219 81 31 chr20 10915153 10915274 -61238608 + L1ME3A LINE L1 5478 5592 -570 10136 87 12 5 chr20 10915274 10916550 -61237332 + HSMAR1 DNA Mariner 2 1287 0 1476 219 81 31 chr20 10916550 10917006 -61236876 + L1ME3A LINE L1 5592 6104 -58 2679 241 127 11 chr20 10917036 10917746 -61236136 - MER21B LTR ERV1 -54 809 18 1015 196 178 25 chr20 10917756 10918031 -61235851 - MER2 DNA MER2_type -27 318 2 429 241 0 0 chr20 10918057 10918136 -61235746 - MER21B LTR ERV1 -773 90 12 259 226 0 0 chr20 10918150 10918212 -61235670 + L1ME3A LINE L1 6100 6161 -9 1148 158 0 15 chr20 10918438 10918634 -61235248 - AluJb SINE Alu -8 304 112 291 296 11 108 chr20 10920552 10920728 -61233154 - MIR3 SINE MIR -28 180 22 315 0 0 0 chr20 10920763 10920798 -61233084 + (A)n Simple_repeat Simple_repeat 1 35 0 626 254 107 17 chr20 10920886 10921063 -61232819 + MIR SINE MIR 31 223 -39 225 113 38 75 chr20 10926271 10926324 -61227558 + G-rich Low_complexity Low_complexity 3 53 0 324 188 0 0 chr20 10926483 10926547 -61227335 + (TG)n Simple_repeat Simple_repeat 2 65 0 207 0 0 0 chr20 10926604 10926627 -61227255 + (CCCCCA)n Simple_repeat Simple_repeat 2 24 0 360 0 0 0 chr20 10927704 10927744 -61226138 + (CA)n Simple_repeat Simple_repeat 1 40 0 272 318 0 0 chr20 10930047 10930132 -61223750 + MIR SINE MIR 98 182 -80 190 226 151 38 chr20 10930327 10930380 -61223502 - L2 LINE L2 0 3272 3214 368 257 147 0 chr20 10930391 10930500 -61223382 - MIR SINE MIR -133 129 5 206 308 0 13 chr20 10931492 10931570 -61222312 - MIR SINE MIR -50 212 136 301 358 12 43 chr20 10931768 10931930 -61221952 + L2 LINE L2 2190 2346 -968 1859 299 122 13 chr20 10932029 10933027 -61220855 + L2 LINE L2 2055 3163 -150 285 266 183 23 chr20 10933046 10933347 -61220535 - HAL1 LINE L1 -110 2397 2049 * 509 280 15 38 chr20 10933343 10933607 -61220275 + HAL1 LINE L1 1429 1686 -821 402 265 73 73 chr20 10934463 10934667 -61219215 + HAL1 LINE L1 2214 2417 -90 3393 218 42 45 chr20 10935070 10935414 -61218468 + L1MB3 LINE L1 17 361 -6181 901 159 0 6 chr20 10935414 10935571 -61218311 + L1PA15 LINE L1 6010 6165 0 3393 218 42 45 chr20 10935571 10936179 -61217703 + L1MB3 LINE L1 361 966 -5576 267 198 103 35 chr20 10936185 10936301 -61217581 + L1M4 LINE L1 2759 2882 -3762 * 2570 233 52 29 chr20 10936300 10937653 -61216229 + L1MB3 LINE L1 949 2446 -4200 709 186 0 0 chr20 10937658 10937800 -61216082 + FLAM_A SINE Alu 6 147 0 1215 224 38 8 chr20 10937824 10938190 -61215692 + L1MB3 LINE L1 5114 5490 -1154 2501 196 50 22 chr20 10938190 10939346 -61214536 + L1M4 LINE L1 5062 6243 -439 * 4264 181 23 18 chr20 10939338 10940418 -61213464 + L1MB3 LINE L1 5599 6680 -1 299 247 35 59 chr20 10940418 10940503 -61213379 - MER5B DNA MER1_type -54 124 42 1265 197 10 69 chr20 10940504 10940794 -61213088 + AluJb SINE Alu 1 273 -39 196 140 18 88 chr20 10941003 10941060 -61212822 + MER5C DNA MER1_type 83 135 -189 583 234 153 10 chr20 10941200 10941409 -61212473 - MIR SINE MIR -2 260 22 255 293 30 20 chr20 10941445 10941544 -61212338 + MIR SINE MIR 44 143 -119 2293 112 0 0 chr20 10941599 10941911 -61211971 - AluSq SINE Alu -1 312 1 713 254 77 23 chr20 10942414 10942717 -61211165 - MLT1K LTR MaLR -9 579 212 555 244 17 17 chr20 10943004 10943123 -61210759 - MER5A DNA MER1_type -60 129 11 349 196 137 20 chr20 10943678 10943780 -61210102 + MIR SINE MIR 76 189 -73 311 288 72 24 chr20 10944005 10944130 -61209752 - MIR SINE MIR -79 183 53 21 0 0 0 chr20 10944241 10944262 -61209620 + AT_rich Low_complexity Low_complexity 1 21 0 185 180 20 0 chr20 10944409 10944459 -61209423 + CT-rich Low_complexity Low_complexity 2 52 0 2343 103 0 0 chr20 10944801 10945103 -61208779 - AluSx SINE Alu -10 302 1 645 314 79 16 chr20 10945250 10945629 -61208253 - MLT1I LTR MaLR -1 408 6 987 204 10 0 chr20 10946243 10946444 -61207438 + MER3 DNA MER1_type 5 207 -2 316 359 41 35 chr20 10947220 10947365 -61206517 - L2 LINE L2 -30 3242 3097 869 158 0 0 chr20 10947466 10947599 -61206283 + FLAM_C SINE Alu 1 133 0 719 233 157 54 chr20 10947654 10947691 -61206191 + MLT1J2 LTR MaLR 44 76 -374 1901 161 3 20 chr20 10947691 10947995 -61205887 - AluJb SINE Alu -13 299 1 719 233 157 54 chr20 10947995 10948326 -61205556 + MLT1J2 LTR MaLR 76 450 0 409 258 10 10 chr20 10948391 10948488 -61205394 - MIR SINE MIR -95 113 17 400 321 117 35 chr20 10948990 10949333 -61204549 + MLT1L LTR MaLR 1 371 -244 268 269 26 0 chr20 10949577 10949655 -61204227 + MIR SINE MIR 118 197 -65 * 1086 330 47 48 chr20 10949645 10950088 -61203794 - L2 LINE L2 0 3313 2871 1935 156 0 16 chr20 10950088 10950395 -61203487 + AluSx SINE Alu 1 302 -10 1086 330 47 48 chr20 10950395 10950984 -61202898 - L2 LINE L2 -442 2871 2275 1213 268 112 12 chr20 10951003 10951484 -61202398 - MLT1H LTR MaLR 0 549 21 391 328 25 25 chr20 10951528 10951732 -61202150 - L2 LINE L2 -1074 2240 2037 366 274 0 0 chr20 10952022 10952128 -61201754 + L1ME3A LINE L1 6065 6170 0 26 50 0 0 chr20 10952349 10952389 -61201493 + AT_rich Low_complexity Low_complexity 1 40 0 309 294 13 33 chr20 10952922 10953065 -61200817 - MIR SINE MIR -11 197 57 479 167 25 25 chr20 10953297 10953413 -61200469 + MLT1G LTR MaLR 6 121 -434 496 303 212 39 chr20 10953416 10953486 -61200396 - L2 LINE L2 -653 2661 2604 273 29 0 0 chr20 10953486 10953520 -61200362 + (CCCTAA)n Simple_repeat Simple_repeat 5 38 0 496 303 212 39 chr20 10953520 10953812 -61200070 - L2 LINE L2 -710 2604 2236 244 288 32 56 chr20 10954760 10954885 -61198997 + MIR SINE MIR 13 134 -128 239 336 49 62 chr20 10954851 10955095 -61198787 + L2 LINE L2 2940 3180 -133 * 1437 212 23 13 chr20 10955231 10955617 -61198265 - Charlie5 DNA MER1_type 0 2623 2234 613 160 21 35 chr20 10955625 10955769 -61198113 - MER3 DNA MER1_type -87 122 28 237 280 40 13 chr20 10955891 10955966 -61197916 - MIR SINE MIR -77 185 109 2196 110 6 22 chr20 10956454 10956771 -61197111 - AluSx SINE Alu 0 312 1 1403 269 57 33 chr20 10956881 10957372 -61196510 + MLT1J LTR MaLR 9 511 0 1894 168 10 3 chr20 10957698 10958007 -61195875 - AluJo SINE Alu -1 311 1 778 243 107 42 chr20 10959022 10959331 -61194551 + MLT1H LTR MaLR 216 544 -5 685 270 120 43 chr20 10960009 10960427 -61193455 - MLT1H LTR MaLR 0 549 100 233 361 19 4 chr20 10960444 10960564 -61193318 + MIR SINE MIR 35 157 -65 1383 234 76 18 chr20 10960567 10961003 -61192879 + MLT1C LTR MaLR 1 461 -6 271 304 65 11 chr20 10961814 10961906 -61191976 + MIR SINE MIR 20 116 -92 541 254 51 61 chr20 10962038 10962235 -61191647 - L2 LINE L2 0 3313 3119 1013 206 19 29 chr20 10962343 10962552 -61191330 - AluJo SINE Alu -16 296 90 794 153 0 0 chr20 10962582 10962700 -61191182 - FLAM_C SINE Alu -15 118 1 248 207 0 35 chr20 10963307 10963365 -61190517 + MLT1L LTR MaLR 145 200 -415 573 200 20 38 chr20 10963524 10963768 -61190114 + Tigger7 DNA MER2_type 1 316 -2171 * 885 162 17 0 chr20 10963757 10963930 -61189952 + Tigger7 DNA MER2_type 2316 2491 0 576 265 74 3 chr20 10963941 10964172 -61189710 + MLT1L LTR MaLR 345 615 0 325 265 0 100 chr20 10964865 10965035 -61188847 + MLT1H LTR MaLR 3 155 -394 1755 241 27 12 chr20 10967340 10967821 -61186061 + L1MC3 LINE L1 7124 7611 -174 258 164 164 27 chr20 10968896 10968969 -61184913 + MIR3 SINE MIR 91 173 -35 997 236 206 10 chr20 10968978 10969025 -61184857 + MLT1H LTR MaLR 59 96 -453 2240 110 0 0 chr20 10969025 10969325 -61184557 + AluSx SINE Alu 1 300 -12 997 236 206 10 chr20 10969325 10969676 -61184206 + MLT1H LTR MaLR 96 535 -14 856 303 50 42 chr20 10970391 10970794 -61183088 - MLT1K LTR MaLR -181 407 2 344 232 205 26 chr20 10970799 10970950 -61182932 - MER5B DNA MER1_type 0 178 1 230 220 110 33 chr20 10971890 10971981 -61181901 + MIR3 SINE MIR 109 206 -2 248 290 22 87 chr20 10972349 10972487 -61181395 - L2 LINE L2 -20 3293 3165 22 0 0 0 chr20 10972800 10972822 -61181060 + GC_rich Low_complexity Low_complexity 1 22 0 823 260 220 4 chr20 10973706 10974191 -61179691 + L2 LINE L2 2666 3262 -51 222 314 4 0 chr20 10974239 10974311 -61179571 - MIR SINE MIR -105 103 31 204 359 75 38 chr20 10974902 10975095 -61178787 + MIR SINE MIR 6 212 -50 319 208 144 32 chr20 10976354 10976479 -61177403 - MLT1H LTR MaLR 0 549 411 320 267 52 35 chr20 10976980 10977096 -61176786 + MIR SINE MIR 36 153 -109 572 319 43 0 chr20 10978213 10978376 -61175506 + MIR3 SINE MIR 21 190 -18 1999 112 22 4 chr20 10978394 10978670 -61175212 - AluSp SINE Alu -19 294 14 22315 82 10 15 chr20 10979504 10981430 -61172452 - L1PA6 LINE L1 -3 6151 4216 2552 64 0 6 chr20 10981430 10981742 -61172140 - AluY SINE Alu -1 310 1 22315 82 10 15 chr20 10981742 10985986 -61167896 - L1PA6 LINE L1 -1938 4216 11 836 289 128 4 chr20 10986052 10986325 -61167557 - LTR16C LTR ERVL -41 450 144 456 336 57 38 chr20 10986531 10986849 -61167033 - MLT1K LTR MaLR -78 510 187 407 331 45 7 chr20 10987628 10987782 -61166100 - MIR3 SINE MIR -7 201 42 542 319 27 51 chr20 10987997 10988097 -61165785 - MIR SINE MIR 0 262 161 3861 135 17 5 chr20 10988097 10988674 -61165208 + L1PA16 LINE L1 5580 6163 -3 542 319 27 51 chr20 10988674 10988830 -61165052 - MIR SINE MIR -101 161 12 22 0 0 0 chr20 10988950 10988972 -61164910 + AT_rich Low_complexity Low_complexity 1 22 0 22 56 0 0 chr20 10990179 10990215 -61163667 + AT_rich Low_complexity Low_complexity 1 36 0 242 359 55 0 chr20 10990511 10990639 -61163243 + L2 LINE L2 2926 3060 -212 574 299 77 62 chr20 10990831 10991221 -61162661 - L2 LINE L2 -8 3305 2904 1879 130 22 4 chr20 10991221 10991598 -61162284 - AluSc SINE Alu 0 382 1 574 299 77 62 chr20 10991598 10991688 -61162194 - L2 LINE L2 -409 2904 2817 191 243 143 43 chr20 10991736 10991806 -61162076 + L2 LINE L2 3197 3273 -40 267 293 42 73 chr20 10992334 10992508 -61161374 - MIR3 SINE MIR -13 195 31 201 139 0 0 chr20 10992708 10992751 -61161131 + (T)n Simple_repeat Simple_repeat 1 43 0 267 31 0 0 chr20 10992949 10992981 -61160901 + (TC)n Simple_repeat Simple_repeat 2 33 0 363 44 0 0 chr20 10992983 10993028 -61160854 + (CA)n Simple_repeat Simple_repeat 1 45 0 1190 77 6 0 chr20 10993210 10993366 -61160516 + L1PB1 LINE L1 5634 5790 -361 291 28 0 0 chr20 10993366 10993402 -61160480 + (TG)n Simple_repeat Simple_repeat 2 37 0 2775 97 3 18 chr20 10993408 10993789 -61160093 + L1PB1 LINE L1 5776 6150 -1 2250 173 25 67 chr20 10994208 10994653 -61159229 + MSTB LTR MaLR 1 426 0 721 177 4 24 chr20 10994686 10994946 -61158936 + (CATATA)n Simple_repeat Simple_repeat 1 254 0 22 56 0 0 chr20 10995029 10995065 -61158817 + AT_rich Low_complexity Low_complexity 1 36 0 221 146 21 0 chr20 10995331 10995379 -61158503 + (TA)n Simple_repeat Simple_repeat 1 49 0 201 74 0 0 chr20 10995385 10995412 -61158470 + (CA)n Simple_repeat Simple_repeat 1 27 0 357 24 0 0 chr20 10995412 10995454 -61158428 + (TG)n Simple_repeat Simple_repeat 2 43 0 1762 223 52 38 chr20 10995741 10996238 -61157644 - L1ME3A LINE L1 -5 6165 5662 210 189 0 19 chr20 10996970 10997023 -61156859 + (TTAAA)n Simple_repeat Simple_repeat 2 53 0 492 319 135 18 chr20 10997027 10997341 -61156541 - L2 LINE L2 -145 3168 2784 2629 134 65 0 chr20 10997341 10997743 -61156139 - MSTA LTR MaLR 0 428 1 492 319 135 18 chr20 10997743 10997909 -61155973 - L2 LINE L2 -529 2784 2639 345 209 48 48 chr20 10998052 10998157 -61155725 - MIR3 SINE MIR -15 193 89 259 235 0 0 chr20 10998429 10998480 -61155402 + L2 LINE L2 3259 3309 -4 1545 258 46 71 chr20 10998605 10999197 -61154685 - MLT1K LTR MaLR -1 587 11 198 71 0 0 chr20 10999372 10999400 -61154482 + (T)n Simple_repeat Simple_repeat 1 28 0 338 203 83 68 chr20 11000097 11000230 -61153652 - LTR33A LTR ERVL -29 494 360 456 193 0 35 chr20 11000539 11000653 -61153229 + MER113 DNA MER1_type? 114 223 -298 209 251 230 68 chr20 11001364 11001555 -61152327 + L2 LINE L2 3087 3308 -5 339 261 17 35 chr20 11002135 11002250 -61151632 + MLT1H LTR MaLR 51 163 -386 344 257 26 79 chr20 11002376 11002528 -61151354 + MLT1H LTR MaLR 406 549 0 794 256 93 83 chr20 11002678 11002975 -61150907 + L2 LINE L2 2848 3153 -160 576 111 0 12 chr20 11002975 11003056 -61150826 + MADE1 DNA Mariner 1 80 0 794 256 93 83 chr20 11003056 11003218 -61150664 + L2 LINE L2 3153 3312 -1 824 192 0 0 chr20 11003319 11003449 -61150433 + FLAM_A SINE Alu 1 130 -3 214 335 174 29 chr20 11003507 11004193 -61149689 - L2 LINE L2 -637 2677 1893 231 235 78 0 chr20 11005589 11005640 -61148242 + MLT1H LTR MaLR 483 537 -12 1191 187 34 5 chr20 11005863 11006072 -61147810 + MER20 DNA MER1_type 3 217 -2 210 234 43 0 chr20 11006403 11006450 -61147432 - L2 LINE L2 -1 3312 3264 199 320 90 0 chr20 11007505 11007583 -61146299 - MIR SINE MIR -71 191 107 2378 129 28 3 chr20 11008203 11008560 -61145322 - MER47A DNA MER2_type 0 366 1 379 243 65 9 chr20 11008569 11008676 -61145206 + MIR SINE MIR 28 140 -122 572 274 112 53 chr20 11008683 11009040 -61144842 - L2 LINE L2 0 3313 2936 274 250 0 0 chr20 11009047 11009111 -61144771 + MIR SINE MIR 146 209 -53 441 296 239 9 chr20 11009160 11009494 -61144388 - L3 LINE CR1 -15 1562 1152 372 247 209 10 chr20 11011061 11011204 -61142678 - MER5A DNA MER1_type 0 189 13 387 224 72 32 chr20 11011250 11011375 -61142507 + L2 LINE L2 3184 3313 0 238 293 0 0 chr20 11011407 11011465 -61142417 + L2 LINE L2 3215 3272 0 259 288 23 61 chr20 11013399 11013531 -61140351 + MIR SINE MIR 76 202 -60 514 238 189 0 chr20 11013533 11013676 -61140206 - MER5A DNA MER1_type -6 183 14 1506 235 100 56 chr20 11014077 11014535 -61139347 + L1ME3 LINE L1 5651 6134 -36 2017 146 13 7 chr20 11014535 11014844 -61139038 - AluJo SINE Alu -1 311 1 1506 235 100 56 chr20 11014844 11014883 -61138999 + L1ME3 LINE L1 6134 6170 0 1048 281 76 43 chr20 11015355 11015868 -61138014 - MLT1H LTR MaLR -18 531 2 200 297 16 0 chr20 11016257 11016321 -61137561 + MER5B DNA MER1_type 114 178 0 932 231 11 0 chr20 11016332 11016514 -61137368 - MER5A DNA MER1_type -5 184 1 475 223 198 13 chr20 11016522 11016679 -61137203 - MER5A DNA MER1_type 0 189 4 1971 152 0 7 chr20 11017355 11017665 -61136217 - AluJb SINE Alu -4 308 1 371 290 82 48 chr20 11017825 11018056 -61135826 + MLT1J LTR MaLR 223 461 -50 962 181 6 0 chr20 11018170 11018336 -61135546 - MER5A DNA MER1_type -19 170 4 914 129 7 7 chr20 11018702 11018842 -61135040 + THE1-int LTR MaLR 897 1036 -544 24 67 0 0 chr20 11019497 11019542 -61134340 + AT_rich Low_complexity Low_complexity 1 45 0 6843 93 10 0 chr20 11019542 11019591 -61134291 - L1PA10 LINE L1 -11 6157 6110 2348 139 22 27 chr20 11019591 11019957 -61133925 + THE1B LTR MaLR 1 364 0 12802 88 2 0 chr20 11019958 11021533 -61132349 + THE1B-int LTR MaLR 2 1580 0 2497 120 19 25 chr20 11021533 11021899 -61131983 + THE1B LTR MaLR 1 364 0 6843 93 10 0 chr20 11021899 11022806 -61131076 - L1PA10 LINE L1 -57 6111 5200 296 229 180 8 chr20 11022876 11022998 -61130884 - MIR SINE MIR -116 146 4 268 139 70 26 chr20 11023260 11023375 -61130507 + (TA)n Simple_repeat Simple_repeat 1 120 0 3643 202 63 59 chr20 11023385 11023880 -61130002 - L1MB8 LINE L1 -6 6172 5681 813 112 0 0 chr20 11023880 11023987 -61129895 + AluSg/x SINE Alu 177 283 -27 372 22 0 0 chr20 11023988 11024033 -61129849 + (CA)n Simple_repeat Simple_repeat 2 46 0 3643 202 63 59 chr20 11024033 11025124 -61128758 - L1MB8 LINE L1 -496 5682 4462 258 136 0 0 chr20 11025165 11025209 -61128673 + (TA)n Simple_repeat Simple_repeat 1 44 0 1077 211 46 90 chr20 11025226 11025614 -61128268 - MLT2D LTR ERVL -43 371 1 1803 203 38 51 chr20 11025620 11026168 -61127714 - L1MB8 LINE L1 -1713 4433 3893 269 109 65 0 chr20 11026231 11026277 -61127605 + L1PB1 LINE L1 5737 5785 -366 1988 134 0 7 chr20 11026277 11026560 -61127322 + AluSq SINE Alu 1 281 -32 202 28 28 28 chr20 11026566 11026602 -61127280 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 2336 95 3 3 chr20 11026604 11026910 -61126972 + AluSq SINE Alu 1 306 -7 761 53 86 5 chr20 11026918 11027485 -61126397 + (TA)n Simple_repeat Simple_repeat 1 612 0 2417 115 0 64 chr20 11027511 11027704 -61126178 + L1PB1 LINE L1 5782 5939 -212 2102 136 0 3 chr20 11027704 11028006 -61125876 + AluSx SINE Alu 1 301 -11 2417 115 0 64 chr20 11028006 11028204 -61125678 + L1PB1 LINE L1 5939 6148 -3 501 17 0 0 chr20 11028208 11028266 -61125616 + (GAAA)n Simple_repeat Simple_repeat 3 60 0 2219 121 3 0 chr20 11028308 11028605 -61125277 + AluSc SINE Alu 1 298 -11 23 33 0 0 chr20 11028708 11028738 -61125144 + AT_rich Low_complexity Low_complexity 1 30 0 771 249 30 0 chr20 11030004 11030214 -61123668 + MIR SINE MIR 23 241 -21 414 0 0 0 chr20 11030225 11030271 -61123611 + (CAT)n Simple_repeat Simple_repeat 2 47 0 699 326 61 28 chr20 11030486 11030882 -61123000 - MLT1K LTR MaLR -56 532 124 1017 236 87 46 chr20 11031277 11031793 -61122089 - MLT1G LTR MaLR 0 595 10 2301 89 0 0 chr20 11031807 11032135 -61121747 + AluSc SINE Alu 1 328 0 1081 235 100 59 chr20 11033921 11034360 -61119522 + LTR16A1 LTR ERVL 1 457 0 194 324 29 29 chr20 11034733 11034801 -61119081 + MIR SINE MIR 76 143 -65 1845 72 16 0 chr20 11035568 11035817 -61118065 - L1PA13 LINE L1 -19 6144 5892 638 252 142 21 chr20 11035880 11036162 -61117720 - LTR16A1 LTR ERVL -11 446 131 379 370 0 8 chr20 11036407 11036534 -61117348 + MIR SINE MIR 20 145 -63 2345 76 7 0 chr20 11036713 11037014 -61116868 - AluY SINE Alu -8 303 1 441 291 74 14 chr20 11037016 11037301 -61116581 - L1M4 LINE L1 -3725 2421 2120 393 58 0 0 chr20 11037846 11037898 -61115984 + (TC)n Simple_repeat Simple_repeat 1 52 0 320 287 0 25 chr20 11038421 11038543 -61115339 - MLT1H LTR MaLR 0 549 431 324 321 124 5 chr20 11038560 11038753 -61115129 - LTR33 LTR ERVL -305 216 1 371 236 64 93 chr20 11039110 11039250 -61114632 + MIR3 SINE MIR 34 169 -39 896 265 111 11 chr20 11040436 11040931 -61112951 + MLT1G1 LTR MaLR 3 593 -2 2110 144 35 3 chr20 11041206 11041573 -61112309 + MLT1B LTR MaLR 12 390 0 257 290 0 60 chr20 11041573 11041673 -61112209 - MIR SINE MIR -90 172 79 549 247 98 47 chr20 11041902 11042137 -61111745 + MLT1L LTR MaLR 45 291 -324 2101 127 80 32 chr20 11042417 11042818 -61111064 - Tigger2 DNA MER2_type -1 2717 2298 393 162 15 0 chr20 11042822 11042890 -61110992 - Tigger2 DNA MER2_type -2649 69 1 4597 194 32 26 chr20 11043664 11044292 -61109590 - L1MD1 LINE L1 0 6242 5619 2163 99 0 3 chr20 11044292 11044575 -61109307 - AluSg SINE Alu -13 297 16 4597 194 32 26 chr20 11044575 11045178 -61108704 - L1MD1 LINE L1 -623 5619 5003 2555 110 6 8 chr20 11045178 11045543 -61108339 - THE1B LTR MaLR 0 364 1 4597 194 32 26 chr20 11045543 11045647 -61108235 - L1MD1 LINE L1 -1239 5003 4901 323 247 16 73 chr20 11045750 11045936 -61107946 - L1MD1 LINE L1 -2990 3156 2960 * 2944 117 66 66 chr20 11045929 11046208 -61107674 - L1MA5 LINE L1 -6 6294 6016 1586 164 52 151 chr20 11046208 11046818 -61107064 - L1PB4 LINE L1 -143 6013 5464 3903 113 41 12 chr20 11046821 11047285 -61106597 + L1PB4 LINE L1 4995 5444 -707 3903 90 50 20 chr20 11047285 11047880 -61106002 + L1PB1 LINE L1 5535 6151 0 3903 113 41 12 chr20 11047880 11047901 -61105981 + L1PB1 LINE L1 5444 6151 0 2398 150 62 5 chr20 11047896 11048061 -61105821 - L1PB4 LINE L1 -743 5403 5249 * 210 71 0 0 chr20 11048061 11048089 -61105793 + (ATG)n Simple_repeat Simple_repeat 1 28 0 2398 150 62 5 chr20 11048089 11048492 -61105390 - L1PB4 LINE L1 -897 5249 4887 320 338 75 0 chr20 11048951 11049084 -61104798 - MIR SINE MIR -38 224 82 988 102 0 22 chr20 11049365 11049502 -61104380 - AluSq/x SINE Alu -179 134 1 866 291 50 25 chr20 11050334 11050451 -61103431 + LTR16C LTR ERVL 94 207 -284 2171 161 43 28 chr20 11050451 11050873 -61103009 - MSTA LTR MaLR 0 428 1 866 291 50 25 chr20 11050873 11051112 -61102770 + LTR16C LTR ERVL 207 459 -32 499 251 43 2 chr20 11051145 11051329 -61102553 + MLT1H LTR MaLR 12 231 -318 333 154 103 0 chr20 11051331 11051409 -61102473 + MLT1H LTR MaLR 464 549 0 299 319 238 6 chr20 11051865 11052025 -61101857 + MIR3 SINE MIR 4 200 -8 384 127 0 32 chr20 11052111 11052174 -61101708 + MER5A DNA MER1_type 1 61 -128 1323 166 44 9 chr20 11052174 11052403 -61101479 - AluJo SINE Alu -75 237 1 342 154 0 0 chr20 11052405 11052457 -61101425 + MER5A DNA MER1_type 52 103 -86 464 250 20 0 chr20 11052609 11052709 -61101173 + MER5A DNA MER1_type 88 189 0 214 290 213 7 chr20 11052719 11052874 -61101008 + MER5A DNA MER1_type 3 189 0 320 274 27 0 chr20 11052936 11053009 -61100873 - MER5A DNA MER1_type -106 83 9 319 217 0 0 chr20 11053083 11053143 -61100739 + MER91B DNA MER1_type 5 64 -126 477 179 74 11 chr20 11053221 11053316 -61100566 + MIR SINE MIR 49 149 -113 488 204 129 0 chr20 11053930 11054077 -61099805 - L1M4 LINE L1 -1274 4872 4707 1059 250 32 18 chr20 11055876 11056156 -61097726 - LTR8 LTR ERV1 0 691 408 * 3524 116 14 0 chr20 11056143 11056693 -61097189 + MER41B LTR ERV1 78 635 0 228 255 0 0 chr20 11057274 11057325 -61096557 + L2 LINE L2 3263 3313 0 402 85 0 0 chr20 11057499 11057558 -61096324 + (TA)n Simple_repeat Simple_repeat 2 60 0 326 239 192 54 chr20 11057579 11057913 -61095969 - L1ME4a LINE L1 -5 6116 5737 1151 269 139 5 chr20 11058144 11058576 -61095306 + LTR16C LTR ERVL 1 490 -1 225 0 0 0 chr20 11058629 11058654 -61095228 + (T)n Simple_repeat Simple_repeat 1 25 0 488 268 55 38 chr20 11059592 11059844 -61094038 - MLT1L LTR MaLR -39 576 237 207 0 0 0 chr20 11059901 11059924 -61093958 + (A)n Simple_repeat Simple_repeat 1 23 0 237 198 0 81 chr20 11060173 11060259 -61093623 - MLT1D LTR MaLR -16 526 448 256 313 149 10 chr20 11060302 11060497 -61093385 - MLT1D LTR MaLR -297 252 31 210 211 39 0 chr20 11061451 11061503 -61092379 + MIR SINE MIR 136 189 -73 432 293 26 0 chr20 11061535 11061651 -61092231 - MIR SINE MIR -65 197 79 844 299 27 27 chr20 11061817 11062341 -61091541 + MLT1K LTR MaLR 17 572 -16 425 176 23 92 chr20 11062680 11062748 -61091134 + MER3 DNA MER1_type 49 58 -104 2062 124 0 23 chr20 11062748 11063054 -61090828 - AluSc SINE Alu -10 299 1 425 176 23 92 chr20 11063054 11063116 -61090766 + MER3 DNA MER1_type 58 123 -39 1025 210 52 3 chr20 11063123 11063433 -61090449 + MER3 DNA MER1_type 2242 2566 0 397 169 24 48 chr20 11064113 11064196 -61089686 - MLT1D LTR MaLR -424 81 1 204 125 0 0 chr20 11065174 11065206 -61088676 + (TTA)n Simple_repeat Simple_repeat 2 33 0 1302 163 40 8 chr20 11065576 11065827 -61088055 - LTR16C LTR ERVL 0 491 233 1037 125 32 132 chr20 11065828 11066109 -61087773 + LTR12 LTR ERV1 22 274 -440 316 200 57 19 chr20 11066112 11066217 -61087665 + LTR30 LTR ERV1 544 652 -70 651 89 0 0 chr20 11066217 11066307 -61087575 + LTR12 LTR ERV1 617 706 -8 463 278 86 29 chr20 11066311 11066520 -61087362 - LTR16C LTR ERVL -236 255 35 302 267 104 25 chr20 11067626 11067866 -61086016 - LTR16A1 LTR ERVL 0 457 199 268 341 49 12 chr20 11067875 11067957 -61085925 - L2 LINE L2 -61 3211 3127 1315 248 44 16 chr20 11068914 11069297 -61084585 - LTR16C LTR ERVL 0 491 98 244 361 10 10 chr20 11069513 11069610 -61084272 - L2 LINE L2 -255 3058 2962 501 155 19 10 chr20 11069636 11069739 -61084143 - FRAM SINE Alu -2 174 71 239 316 0 63 chr20 11071228 11071323 -61082559 - L3 LINE CR1 -106 1471 1383 317 379 122 9 chr20 11072034 11072377 -61081505 + L2 LINE L2 2568 2949 -365 191 302 58 47 chr20 11072497 11072583 -61081299 + L2 LINE L2 3090 3176 -96 185 303 9 64 chr20 11074057 11074130 -61079752 - MIR SINE MIR -10 252 185 2294 113 46 62 chr20 11074130 11074565 -61079317 + MSTA LTR MaLR 1 428 0 185 303 9 64 chr20 11074565 11074600 -61079282 - MIR SINE MIR -77 185 150 673 264 102 21 chr20 11074686 11074921 -61078961 - MLT1I LTR MaLR -151 258 5 386 230 46 0 chr20 11074928 11075015 -61078867 - MIR SINE MIR -114 148 58 223 301 46 56 chr20 11075357 11075573 -61078309 + L2 LINE L2 2762 2975 -339 4823 102 24 1 chr20 11075633 11076356 -61077526 - L1MA2 LINE L1 -1 6303 5565 1450 206 98 0 chr20 11076363 11076688 -61077194 + MSTD LTR MaLR 40 396 0 362 359 97 38 chr20 11076688 11076978 -61076904 + L2 LINE L2 2966 3272 0 434 337 121 34 chr20 11078655 11079248 -61074634 - L2 LINE L2 -566 2748 2104 257 194 0 16 chr20 11079293 11079355 -61074527 + T-rich Low_complexity Low_complexity 4 64 0 685 172 35 6 chr20 11079370 11079544 -61074338 + CT-rich Low_complexity Low_complexity 2 180 0 559 329 89 15 chr20 11079565 11079957 -61073925 + MLT1K LTR MaLR 10 430 -158 188 269 103 13 chr20 11080148 11080226 -61073656 - L2 LINE L2 -1264 2050 1966 222 358 32 41 chr20 11080353 11080476 -61073406 + L2 LINE L2 2929 3050 -222 271 360 88 9 chr20 11081042 11081156 -61072726 + L2 LINE L2 3113 3235 -37 1041 285 56 25 chr20 11081157 11081602 -61072280 - LTR33A LTR ERVL -3 520 62 210 193 18 70 chr20 11081647 11081704 -61072178 + L2 LINE L2 3259 3312 -1 1145 237 86 54 chr20 11083093 11083536 -61070346 + LTR16A1 LTR ERVL 1 457 0 1431 118 228 0 chr20 11083711 11083948 -61069934 + AluSx SINE Alu 1 291 -11 324 70 0 0 chr20 11083959 11084002 -61069880 + (CA)n Simple_repeat Simple_repeat 2 44 0 273 321 48 71 chr20 11084140 11084392 -61069490 - MIR SINE MIR -2 260 15 203 267 0 0 chr20 11084923 11084983 -61068899 + A-rich Low_complexity Low_complexity 1 60 0 214 189 132 0 chr20 11085186 11085239 -61068643 - MER5A DNA MER1_type -129 60 1 498 167 0 0 chr20 11085668 11085752 -61068130 + L1MC4 LINE L1 6944 7027 -1015 424 222 116 111 chr20 11085752 11085959 -61067923 - MER34 LTR ERV1 -2 540 356 1048 223 32 11 chr20 11086328 11086611 -61067271 + L1MC4 LINE L1 7024 7312 -730 899 195 56 5 chr20 11086613 11086808 -61067074 - Tigger2 DNA MER2_type -13 2705 2501 * 1056 84 0 0 chr20 11086805 11086948 -61066934 - Tigger2 DNA MER2_type -2272 446 304 1721 200 79 103 chr20 11086969 11087143 -61066739 + L1MC4 LINE L1 7400 7577 -465 234 0 0 0 chr20 11087143 11087169 -61066713 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 1721 200 79 103 chr20 11087169 11087653 -61066229 + L1MC4 LINE L1 7577 8042 0 841 239 35 5 chr20 11088080 11088281 -61065601 + MLT2C1 LTR ERVL 4 210 -187 318 211 0 0 chr20 11088281 11088352 -61065530 + L1MC4 LINE L1 7783 7853 -189 479 219 12 94 chr20 11088357 11088517 -61065365 + MLT2C1 LTR ERVL 196 342 -55 702 62 26 0 chr20 11088517 11088630 -61065252 + (TCTA)n Simple_repeat Simple_repeat 1 116 0 561 62 0 37 chr20 11088644 11088725 -61065157 - MADE1 DNA Mariner -2 78 1 203 104 0 83 chr20 11088736 11088784 -61065098 + (CTAGGG)n Simple_repeat Simple_repeat 5 48 0 737 189 0 34 chr20 11088938 11089086 -61064796 + FLAM_C SINE Alu 1 143 0 805 242 132 7 chr20 11092726 11093007 -61060875 + MER5C DNA MER1_type 8 323 -1 21 0 0 0 chr20 11093731 11093752 -61060130 + AT_rich Low_complexity Low_complexity 1 21 0 491 305 52 0 chr20 11093918 11094072 -61059810 - MIR SINE MIR -50 212 51 1349 139 63 0 chr20 11096527 11096779 -61057103 + L1MA2 LINE L1 6037 6304 0 210 37 0 0 chr20 11096809 11096836 -61057046 + (CA)n Simple_repeat Simple_repeat 2 28 0 21 36 0 0 chr20 11098455 11098483 -61055399 + AT_rich Low_complexity Low_complexity 1 28 0 1533 138 4 17 chr20 11098827 11099067 -61054815 - AluSx SINE Alu -75 237 1 634 231 19 43 chr20 11099556 11099764 -61054118 - MER3 DNA MER1_type -2 207 5 22 35 0 0 chr20 11100343 11100372 -61053510 + AT_rich Low_complexity Low_complexity 1 29 0 2126 117 0 13 chr20 11101110 11101409 -61052473 + AluSx SINE Alu 18 312 0 781 292 128 39 chr20 11102838 11103454 -61050428 + HAL1b LINE L1 207 877 -471 24 53 0 0 chr20 11103735 11103773 -61050109 + AT_rich Low_complexity Low_complexity 1 38 0 23 86 0 0 chr20 11103992 11104050 -61049832 + AT_rich Low_complexity Low_complexity 1 58 0 345 266 104 66 chr20 11107495 11107920 -61045962 + MLT1K LTR MaLR 102 577 -11 303 269 115 10 chr20 11107996 11108204 -61045678 + L2 LINE L2 1975 2204 -1110 2223 84 0 0 chr20 11108223 11108496 -61045386 - AluSx SINE Alu -39 273 1 452 306 12 25 chr20 11109379 11109539 -61044343 + MIR SINE MIR 76 233 -29 314 285 68 109 chr20 11109758 11110098 -61043784 - L1M2 LINE L1 -5752 1097 772 525 131 0 0 chr20 11110098 11110182 -61043700 + (CCCCCG)n Simple_repeat Simple_repeat 3 86 0 2975 93 9 29 chr20 11110810 11111259 -61042623 + L1PA13 LINE L1 5721 6160 -3 226 211 39 0 chr20 11111355 11111407 -61042475 + A-rich Low_complexity Low_complexity 3 56 0 814 306 44 19 chr20 11111563 11111975 -61041907 - L1ME3A LINE L1 -219 5951 5530 4285 124 67 72 chr20 11112121 11113558 -61040324 - pTR5 LTR ERV1 0 2438 61 21 36 0 0 chr20 11114821 11114849 -61039033 + AT_rich Low_complexity Low_complexity 1 28 0 189 0 0 0 chr20 11115796 11115817 -61038065 + (TTCC)n Simple_repeat Simple_repeat 2 22 0 471 35 0 0 chr20 11115818 11115875 -61038007 + (TC)n Simple_repeat Simple_repeat 2 58 0 682 158 0 63 chr20 11115876 11116003 -61037879 - FRAM SINE Alu -58 118 1 277 265 94 40 chr20 11116272 11116624 -61037258 - L1MDa LINE L1 -2920 3620 3242 414 0 0 0 chr20 11116707 11116753 -61037129 + (TG)n Simple_repeat Simple_repeat 2 47 0 2389 60 0 26 chr20 11116769 11117071 -61036811 - AluY SINE Alu -17 294 1 372 285 26 67 chr20 11117444 11117680 -61036202 - L1MDa LINE L1 -3864 2676 2452 292 353 0 9 chr20 11118108 11118224 -61035658 + MIR SINE MIR 10 124 -138 1456 203 159 5 chr20 11118241 11118709 -61035173 + MLT1F LTR MaLR 1 542 0 279 0 0 0 chr20 11118853 11118884 -61034998 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 709 152 4 2 chr20 11118887 11119139 -61034743 - 7SLRNA srpRNA srpRNA -21 299 1 350 231 51 161 chr20 11119208 11119637 -61034245 - L1MDa LINE L1 -4731 1990 1609 248 267 133 9 chr20 11119897 11120002 -61033880 + MLT1L LTR MaLR 498 615 0 1915 89 0 0 chr20 11121463 11121709 -61032173 - AluSg SINE Alu -11 299 54 1038 279 118 23 chr20 11121846 11122509 -61031373 - L2 LINE L2 -10 3303 2570 331 225 362 7 chr20 11122576 11122714 -61031168 + MLT1H LTR MaLR 266 452 -97 208 289 298 0 chr20 11122830 11122944 -61030938 - L2 LINE L2 -746 2568 2421 686 95 147 0 chr20 11123123 11123239 -61030643 + AluSq/x SINE Alu 1 133 -179 430 254 73 39 chr20 11123431 11123636 -61030246 + LTR16A1 LTR ERVL 34 245 -212 678 253 10 26 chr20 11123938 11124132 -61029750 + LTR16A1 LTR ERVL 267 457 0 377 348 36 0 chr20 11124664 11124802 -61029080 - MIR3 SINE MIR -12 196 54 245 236 18 0 chr20 11125218 11125273 -61028609 - MER5A DNA MER1_type -6 183 128 4003 175 37 19 chr20 11125291 11126785 -61027097 + L1MB8 LINE L1 4358 5869 -309 376 338 13 26 chr20 11127078 11127229 -61026653 + MIR3 SINE MIR 54 202 -6 267 278 0 0 chr20 11127450 11127504 -61026378 - Tigger3(Golem) DNA MER2_type -2975 54 1 1068 200 35 32 chr20 11127506 11127790 -61026092 - L1MB7 LINE L1 -44 6129 5843 2978 115 78 22 chr20 11127790 11128330 -61025552 + Tigger3(Golem) DNA MER2_type 2374 2943 -86 2394 107 24 19 chr20 11128332 11128705 -61025177 + THE1C LTR MaLR 1 375 0 238 244 70 58 chr20 11128791 11128877 -61025005 - MER5A DNA MER1_type -98 91 5 669 265 133 62 chr20 11129157 11129644 -61024238 - LTR33A LTR ERVL 0 523 2 908 198 6 0 chr20 11129754 11129926 -61023956 + MER5B DNA MER1_type 4 176 -2 23 0 0 0 chr20 11130879 11130902 -61022980 + AT_rich Low_complexity Low_complexity 1 23 0 28 0 0 0 chr20 11131037 11131065 -61022817 + AT_rich Low_complexity Low_complexity 1 28 0 654 199 192 0 chr20 11131143 11131294 -61022588 - MER5A DNA MER1_type -1 188 9 31 68 0 0 chr20 11131432 11131491 -61022391 + AT_rich Low_complexity Low_complexity 1 59 0 195 204 0 0 chr20 11131583 11131627 -61022255 + (CATA)n Simple_repeat Simple_repeat 1 44 0 228 205 131 41 chr20 11132104 11132226 -61021656 - L1MB7 LINE L1 -860 5431 5299 531 239 60 60 chr20 11132314 11132481 -61021401 + MIR SINE MIR 2 168 -94 22 70 0 0 chr20 11132896 11132939 -61020943 + AT_rich Low_complexity Low_complexity 1 43 0 401 304 57 57 chr20 11133094 11133571 -61020311 - L1MB7 LINE L1 -2126 4020 3544 2047 119 0 7 chr20 11133677 11133984 -61019898 + AluSx SINE Alu 1 305 0 269 167 28 56 chr20 11134966 11135038 -61018844 - MLT1H LTR MaLR -381 168 99 538 262 14 21 chr20 11135983 11136070 -61017812 + LTR16C LTR ERVL 347 434 -57 782 176 0 8 chr20 11136070 11136201 -61017681 + FLAM_A SINE Alu 4 133 0 538 262 14 21 chr20 11136201 11136258 -61017624 + LTR16C LTR ERVL 434 490 -1 2387 125 13 13 chr20 11136513 11136888 -61016994 - THE1C LTR MaLR 0 375 1 240 344 47 23 chr20 11137267 11137395 -61016487 + LTR16C LTR ERVL 199 329 -162 844 194 127 40 chr20 11138751 11139003 -61014879 + MER74A LTR ERVL 1 274 -284 24 53 0 0 chr20 11140164 11140202 -61013680 + AT_rich Low_complexity Low_complexity 1 38 0 287 56 0 0 chr20 11140748 11140784 -61013098 + tRNA-His-CAC tRNA tRNA 1 36 -39 22 35 0 0 chr20 11140884 11140913 -61012969 + AT_rich Low_complexity Low_complexity 1 29 0 192 308 77 13 chr20 11140948 11141026 -61012856 - L2 LINE L2 -52 3220 3138 3492 133 11 52 chr20 11141107 11141745 -61012137 + LTR9 LTR ERV1 1 612 0 21 0 0 0 chr20 11141781 11141802 -61012080 + AT_rich Low_complexity Low_complexity 1 21 0 2060 93 0 29 chr20 11142487 11142821 -61011061 - AluY SINE Alu 0 337 12 600 261 122 55 chr20 11143199 11143678 -61010204 - L1MB7 LINE L1 -2868 3278 2763 1135 23 0 0 chr20 11144105 11144235 -61009647 - AluY SINE Alu -10 301 172 1034 215 78 90 chr20 11144843 11145243 -61008639 - MLT1H LTR MaLR -105 444 50 2246 118 0 6 chr20 11145960 11146274 -61007608 - AluSx SINE Alu 0 312 1 1264 46 0 0 chr20 11146642 11146793 -61007089 - L1PA3 LINE L1 -5 6150 6000 6393 141 74 6 chr20 11147119 11148259 -61005623 + Tigger3b DNA MER2_type 14 1230 -1 349 287 54 83 chr20 11148847 11149185 -61004697 + MLT1I LTR MaLR 13 367 -182 2133 163 67 8 chr20 11149921 11150295 -61003587 + MSTD LTR MaLR 1 396 0 472 254 211 7 chr20 11150372 11150514 -61003368 + MER5B DNA MER1_type 1 171 -7 275 174 47 0 chr20 11150756 11150905 -61002977 + (TA)n Simple_repeat Simple_repeat 1 156 0 23 33 0 0 chr20 11151018 11151048 -61002834 + AT_rich Low_complexity Low_complexity 1 30 0 1824 155 0 21 chr20 11151180 11151499 -61002383 + AluJb SINE Alu 1 313 0 4514 159 61 21 chr20 11151533 11151862 -61002020 - L1MB3 LINE L1 0 6183 5869 2075 97 0 66 chr20 11151862 11152182 -61001700 + AluSc SINE Alu 1 299 -10 4514 159 61 21 chr20 11152182 11152899 -61000983 - L1MB3 LINE L1 -314 5869 5088 2147 120 0 13 chr20 11153741 11154042 -60999840 - AluSg SINE Alu -13 297 1 204 267 123 48 chr20 11154098 11154244 -60999638 - MIR3 SINE MIR -31 177 21 1231 177 117 38 chr20 11154248 11154565 -60999317 + MER2 DNA MER2_type 3 344 0 3033 37 11 0 chr20 11154702 11155077 -60998805 - L1PA4 LINE L1 0 6155 5777 402 314 155 38 chr20 11155821 11155992 -60997890 + L3 LINE CR1 1296 1504 -73 1226 147 0 82 chr20 11155992 11156237 -60997645 + MER30 DNA MER1_type 2 226 -4 402 314 155 38 chr20 11156237 11156304 -60997578 + L3 LINE CR1 1504 1562 -15 2299 91 7 19 chr20 11157225 11157534 -60996348 - AluY SINE Alu -6 305 1 503 342 103 7 chr20 11159321 11159602 -60994280 + HAL1 LINE L1 1608 1915 -592 539 256 0 30 chr20 11160004 11160168 -60993714 + HAL1b LINE L1 747 905 -443 245 256 24 49 chr20 11160261 11160343 -60993539 + HAL1b LINE L1 836 915 -433 1248 173 107 0 chr20 11160376 11160665 -60993217 + MER33 DNA MER1_type 1 320 -4 21 0 0 0 chr20 11161163 11161184 -60992698 + AT_rich Low_complexity Low_complexity 1 21 0 1278 161 139 15 chr20 11162032 11162299 -60991583 + AluJb SINE Alu 1 300 -2 1020 264 79 27 chr20 11163452 11163782 -60990100 + MLT1I LTR MaLR 63 409 0 736 270 38 0 chr20 11164486 11164671 -60989211 + MIR SINE MIR 40 231 -31 540 0 0 0 chr20 11164776 11164836 -60989046 + (TA)n Simple_repeat Simple_repeat 2 61 0 1546 179 7 35 chr20 11164839 11165129 -60988753 - AluJo SINE Alu -30 282 1 2357 130 11 19 chr20 11165644 11166020 -60987862 - THE1C LTR MaLR 0 375 3 727 275 147 46 chr20 11167305 11167651 -60986231 - LTR16A1 LTR ERVL -22 435 55 2839 148 0 5 chr20 11167799 11168246 -60985636 - Tigger2 DNA MER2_type -1 2717 2273 367 212 45 0 chr20 11168236 11168302 -60985580 - Tigger2 DNA MER2_type -2649 69 1 * 444 276 22 55 chr20 11168863 11169044 -60984838 - LTR33 LTR ERVL -346 175 1 826 290 82 21 chr20 11169396 11169861 -60984021 - HAL1b LINE L1 -553 795 303 2096 145 40 6 chr20 11169862 11170214 -60983668 - THE1B LTR MaLR 0 364 1 1950 188 96 32 chr20 11170225 11170393 -60983489 + MLT1D LTR MaLR 7 163 -342 261 0 0 0 chr20 11170393 11170422 -60983460 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 1950 188 96 32 chr20 11170422 11170720 -60983162 + MLT1D LTR MaLR 163 503 -2 2525 148 21 86 chr20 11171632 11171758 -60982124 - L1MB7 LINE L1 -11 6173 6040 2755 7 0 3 chr20 11171758 11172062 -60981820 - AluYa5 SINE Alu -8 303 1 2525 148 21 86 chr20 11172062 11172494 -60981388 - L1MB7 LINE L1 -144 6040 5651 229 362 64 0 chr20 11172626 11172720 -60981162 - MIR SINE MIR -71 137 38 1767 240 48 28 chr20 11172791 11173253 -60980629 - MLT1H LTR MaLR -4 545 75 1874 188 6 22 chr20 11173253 11173447 -60980435 - MLT1A1 LTR MaLR -2 363 176 2850 194 82 16 chr20 11173447 11174129 -60979753 + LTR8A LTR ERV1 1 727 0 1874 188 6 22 chr20 11174129 11174296 -60979586 - MLT1A1 LTR MaLR -189 176 8 279 170 19 0 chr20 11174313 11174366 -60979516 - MLT1H LTR MaLR -495 54 1 2126 191 38 16 chr20 11174683 11175134 -60978748 + MER65C LTR ERV1 1 461 0 200 303 202 0 chr20 11175174 11175283 -60978599 + L2 LINE L2 3142 3272 0 358 239 8 43 chr20 11175388 11175505 -60978377 + (CATATA)n Simple_repeat Simple_repeat 2 114 0 921 281 99 34 chr20 11176515 11176991 -60976891 + LTR33 LTR ERVL 1 507 -14 270 193 0 0 chr20 11177271 11177328 -60976554 + (TG)n Simple_repeat Simple_repeat 1 57 0 319 339 85 15 chr20 11177923 11178053 -60975829 + MIR SINE MIR 6 144 -118 897 236 140 71 chr20 11178840 11179277 -60974605 + LTR33 LTR ERVL 3 469 -52 2164 123 0 0 chr20 11179301 11179609 -60974273 - AluSx SINE Alu -4 308 1 1024 316 65 48 chr20 11179717 11180639 -60973243 + L2 LINE L2 2367 3306 -7 678 293 56 50 chr20 11180642 11181179 -60972703 + L1ME1 LINE L1 5320 5853 -313 45 45 0 0 chr20 11181489 11181555 -60972327 + AT_rich Low_complexity Low_complexity 1 66 0 2143 246 115 40 chr20 11181556 11182277 -60971605 + MER21B LTR ERV1 1 775 -88 315 0 0 0 chr20 11182277 11182312 -60971570 + (CA)n Simple_repeat Simple_repeat 2 36 0 281 277 27 54 chr20 11183314 11183426 -60970456 + MIR SINE MIR 36 144 -118 1140 286 48 41 chr20 11184102 11184184 -60969698 + HAL1 LINE L1 2 82 -2425 2135 71 3 0 chr20 11184184 11184466 -60969416 - L1PA7 LINE L1 -7 6147 5865 1140 286 48 41 chr20 11184466 11184900 -60968982 + HAL1 LINE L1 82 522 -1985 729 300 39 16 chr20 11184955 11185212 -60968670 - MER115 DNA AcHobo -243 450 188 559 231 46 0 chr20 11185311 11185419 -60968463 - MER81 DNA DNA 0 114 2 1704 266 63 24 chr20 11185442 11186138 -60967744 + HAL1 LINE L1 555 1277 -1230 574 142 0 54 chr20 11186139 11186287 -60967595 + (GAAA)n Simple_repeat Simple_repeat 4 143 0 1484 265 90 87 chr20 11186338 11187551 -60966331 + HAL1 LINE L1 1288 2504 -3 2491 63 0 0 chr20 11187806 11188107 -60965775 - AluY SINE Alu -10 301 1 1373 285 72 32 chr20 11188244 11188770 -60965112 + MLT1H LTR MaLR 1 547 -2 2837 10 0 0 chr20 11189378 11189687 -60964195 - AluYa5 SINE Alu -2 309 1 557 258 36 57 chr20 11189779 11190027 -60963855 + L1ME LINE L1 5560 5798 -368 266 274 85 102 chr20 11191815 11191970 -60961912 - HAL1b LINE L1 -4 6117 5961 192 40 0 0 chr20 11191970 11191995 -60961887 + (CA)n Simple_repeat Simple_repeat 2 26 0 266 274 85 102 chr20 11191995 11192405 -60961477 - HAL1b LINE L1 -160 5961 1204 1555 183 33 23 chr20 11192539 11192845 -60961037 - AluJo SINE Alu -3 309 1 1891 118 62 14 chr20 11192984 11193273 -60960609 - AluSx SINE Alu -9 303 1 623 309 121 26 chr20 11193853 11194316 -60959566 - L1M4 LINE L1 -907 5239 4733 25 0 0 0 chr20 11194316 11194341 -60959541 + AT_rich Low_complexity Low_complexity 1 25 0 555 114 0 0 chr20 11194710 11194789 -60959093 + MADE1 DNA Mariner 2 80 0 570 170 54 0 chr20 11195022 11195134 -60958748 + MER57A LTR ERV1 286 403 0 3364 188 39 36 chr20 11195134 11195902 -60957980 + MER57A-int LTR ERV1 1 850 -6687 444 258 23 24 chr20 11195934 11196110 -60957772 + MER57A-int LTR ERV1 842 2713 -3233 749 234 98 38 chr20 11196110 11196375 -60957507 + MER34C LTR ERV1 147 427 -158 429 228 15 21 chr20 11196376 11196505 -60957377 + MER57A-int LTR ERV1 1094 1190 -3681 292 180 86 40 chr20 11196479 11196609 -60957273 + MER57A-int LTR ERV1 1085 1169 -3767 * 763 178 10 87 chr20 11196617 11196825 -60957057 + MER57A-int LTR ERV1 3081 3272 -3059 597 78 0 0 chr20 11196878 11196955 -60956927 + MER57A-int LTR ERV1 3265 3341 -2990 494 209 0 0 chr20 11197005 11197110 -60956772 + MER57A-int LTR ERV1 3348 3452 -2879 889 209 39 31 chr20 11197228 11197791 -60956091 + MER57A-int LTR ERV1 1710 3116 -1922 * 5256 179 20 89 chr20 11197784 11199188 -60954694 + MER57A-int LTR ERV1 3703 5511 -1949 1632 173 7 15 chr20 11199188 11199459 -60954423 - AluJo SINE Alu -41 271 3 5256 179 20 89 chr20 11199459 11199750 -60954132 + MER57A-int LTR ERV1 5511 5821 -1639 3183 221 59 20 chr20 11199973 11200317 -60953565 + MER57A-int LTR ERV1 2520 2849 -4688 1935 158 81 57 chr20 11200317 11200693 -60953189 + MSTA LTR MaLR 1 389 -39 1693 171 40 20 chr20 11200693 11200997 -60952885 - AluJb SINE Alu -2 310 1 1935 158 81 57 chr20 11200997 11201038 -60952844 + MSTA LTR MaLR 389 428 0 3183 221 59 20 chr20 11201038 11201488 -60952394 + MER57A-int LTR ERV1 2849 6540 -997 2232 108 7 0 chr20 11201504 11201801 -60952081 + AluSx SINE Alu 1 299 -13 797 225 31 11 chr20 11201803 11201994 -60951888 + L1ME3A LINE L1 5967 6161 -9 3063 169 47 42 chr20 11202018 11202121 -60951761 + MER57A-int LTR ERV1 6524 6625 -912 1635 178 3 36 chr20 11202121 11202425 -60951457 + AluJb SINE Alu 1 294 -18 3063 169 47 42 chr20 11202425 11202938 -60950944 + MER57A-int LTR ERV1 6625 7143 -394 848 180 254 29 chr20 11202939 11203250 -60950632 + LTR54B LTR ERV1 1 381 -117 493 196 9 9 chr20 11203251 11203358 -60950524 + MER57A-int LTR ERV1 7430 7536 -1 2017 158 15 53 chr20 11203359 11203752 -60950130 + MER57A LTR ERV1 1 378 -25 590 152 0 9 chr20 11203753 11203865 -60950017 + GA-rich Low_complexity Low_complexity 2 112 0 984 266 71 7 chr20 11204149 11204627 -60949255 + MLT1H LTR MaLR 12 542 -7 1075 257 33 7 chr20 11205025 11205301 -60948581 + MLT1H LTR MaLR 1 283 -266 699 227 51 11 chr20 11205318 11205494 -60948388 + MLT1H LTR MaLR 101 283 -266 397 263 51 8 chr20 11205592 11205710 -60948172 + MLT1H LTR MaLR 423 545 -4 1110 170 63 10 chr20 11206583 11206789 -60947093 - MER20 DNA MER1_type 0 219 3 5093 207 15 3 chr20 11206990 11208141 -60945741 - L1 LINE L1 -2579 3567 2403 8831 157 14 5 chr20 11208141 11208724 -60945158 + L1PB1 LINE L1 3524 4100 -2051 1750 120 6 107 chr20 11208724 11209050 -60944832 - AluSx SINE Alu -16 296 4 8831 157 14 5 chr20 11209050 11209353 -60944529 + L1PB1 LINE L1 4100 4399 -1752 201 39 0 0 chr20 11209353 11209379 -60944503 + (TAAAA)n Simple_repeat Simple_repeat 2 27 0 8831 157 14 5 chr20 11209379 11211091 -60942791 + L1PB1 LINE L1 4399 6146 -5 821 281 74 17 chr20 11212027 11212380 -60941502 - L1ME2 LINE L1 0 6164 5792 201 154 0 0 chr20 11213795 11213834 -60940048 + (TA)n Simple_repeat Simple_repeat 2 40 0 1062 211 108 87 chr20 11213905 11214441 -60939441 + MER39 LTR ERV1 1 706 -1 690 243 58 52 chr20 11214441 11214744 -60939138 - MLT1H LTR MaLR -19 571 226 493 284 33 84 chr20 11215078 11215300 -60938582 + L2 LINE L2 2997 3198 -115 383 233 65 88 chr20 11215300 11215515 -60938367 - MER63A DNA MER1_type 0 210 1 493 284 33 84 chr20 11215515 11215626 -60938256 + L2 LINE L2 3198 3313 0 231 356 80 15 chr20 11216066 11216513 -60937369 + L2 LINE L2 2528 3010 -262 258 167 0 0 chr20 11216743 11216803 -60937079 + CT-rich Low_complexity Low_complexity 1 60 0 206 348 50 14 chr20 11217013 11217154 -60936728 + L2 LINE L2 1852 1997 -1317 346 109 0 0 chr20 11217170 11217225 -60936657 - L1MB2 LINE L1 -4 6167 6113 358 368 15 0 chr20 11217478 11217614 -60936268 - MIR3 SINE MIR -4 204 67 879 203 35 1 chr20 11217774 11217992 -60935890 - L1MB2 LINE L1 -45 6126 5923 1488 268 30 12 chr20 11218122 11218522 -60935360 - LTR16C LTR ERVL -5 486 80 333 335 86 69 chr20 11218551 11219119 -60934763 + L2 LINE L2 2134 2711 -603 411 306 107 28 chr20 11219226 11219872 -60934010 - L1M4 LINE L1 -2527 3619 2923 4334 227 97 64 chr20 11219872 11220831 -60933051 + Charlie2a DNA MER1_type 467 1394 -1468 2259 105 0 3 chr20 11220831 11221125 -60932757 - AluSc SINE Alu -16 293 1 4334 227 97 64 chr20 11221125 11221612 -60932270 + Charlie2a DNA MER1_type 1394 1864 -998 2495 69 0 0 chr20 11221612 11221915 -60931967 + AluY SINE Alu 1 303 -8 4334 227 97 64 chr20 11221915 11222142 -60931740 + Charlie2a DNA MER1_type 1864 2082 -780 1550 191 6 41 chr20 11222142 11222461 -60931421 + AluJb SINE Alu 1 308 -4 4334 227 97 64 chr20 11222461 11222948 -60930934 + Charlie2a DNA MER1_type 2082 2699 -163 938 215 16 5 chr20 11223033 11223219 -60930663 + AluJb SINE Alu 48 235 -77 752 264 14 28 chr20 11223612 11223824 -60930058 + MER3 DNA MER1_type 1 209 0 638 203 49 114 chr20 11223833 11224202 -60929680 + LTR37B LTR ERV1 122 466 -2 1808 111 121 7 chr20 11224392 11224672 -60929210 + AluSx SINE Alu 1 312 0 281 283 91 0 chr20 11224742 11224841 -60929041 + MIR SINE MIR 149 256 -6 2288 154 24 11 chr20 11224975 11225357 -60928525 + MLT1B LTR MaLR 1 387 -3 994 311 56 0 chr20 11225596 11225902 -60927980 - MLT1H LTR MaLR -214 335 13 522 257 22 15 chr20 11226433 11226569 -60927313 - MER58A DNA MER1_type 0 224 88 822 155 0 0 chr20 11226569 11226685 -60927197 + AluJo/FLAM SINE Alu 5 120 -192 456 160 0 50 chr20 11226685 11226785 -60927097 + AluJ/FRAM SINE Alu 218 312 0 376 227 0 15 chr20 11226865 11226931 -60926951 - MER58A DNA MER1_type -42 65 1 819 206 44 50 chr20 11228593 11228718 -60925164 - MER5A DNA MER1_type -10 179 54 2260 85 3 3 chr20 11228718 11229012 -60924870 + AluSc SINE Alu 3 296 -13 819 206 44 50 chr20 11229012 11229066 -60924816 - MER5A DNA MER1_type -135 54 1 446 272 32 8 chr20 11229078 11229213 -60924669 + MER5B DNA MER1_type 47 178 0 2285 207 72 53 chr20 11230069 11230768 -60923114 - L1ME2 LINE L1 -10 6154 5443 1072 162 5 0 chr20 11230879 11231076 -60922806 + L1PB1 LINE L1 5951 6148 -3 31 20 0 20 chr20 11231076 11231109 -60922773 + AT_rich Low_complexity Low_complexity 1 34 -14 815 129 22 7 chr20 11231109 11231248 -60922634 + L1PA16 LINE L1 6024 6164 -2 31 20 0 20 chr20 11231248 11231263 -60922619 + AT_rich Low_complexity Low_complexity 34 48 0 209 235 353 0 chr20 11231830 11231932 -60921950 + MER5A DNA MER1_type 52 189 0 1372 237 17 10 chr20 11233008 11233308 -60920574 + LTR16C LTR ERVL 187 488 -3 5257 146 27 49 chr20 11233622 11235021 -60918861 + L1PA16 LINE L1 4765 6166 0 329 281 98 58 chr20 11235600 11235824 -60918058 + MER102b DNA MER1_type 95 327 -14 230 377 14 0 chr20 11235893 11235962 -60917920 - L2 LINE L2 0 3272 3203 2125 118 28 23 chr20 11236301 11236692 -60917190 + L1MA3 LINE L1 5913 6305 0 829 306 101 32 chr20 11236801 11237177 -60916705 + LTR16A1 LTR ERVL 45 446 -11 2674 97 85 7 chr20 11238338 11238712 -60915170 + MLT2A1 LTR ERVL 1 345 -99 414 0 0 0 chr20 11238712 11238758 -60915124 + (TA)n Simple_repeat Simple_repeat 2 47 0 2091 114 4 4 chr20 11238762 11239043 -60914839 - AluSx SINE Alu -16 296 16 2674 97 85 7 chr20 11239043 11239075 -60914807 + MLT2A1 LTR ERVL 347 444 0 520 283 85 24 chr20 11239079 11239291 -60914591 + L2 LINE L2 3086 3310 -3 441 256 56 73 chr20 11239660 11239907 -60913975 - MLT1J LTR MaLR -4 535 288 840 172 0 0 chr20 11240112 11240234 -60913648 - FLAM_C SINE Alu -21 122 1 231 297 0 0 chr20 11240280 11240344 -60913538 - MLT1J LTR MaLR -447 64 1 416 272 154 0 chr20 11240344 11240480 -60913402 + MIR SINE MIR 89 245 -17 609 219 158 6 chr20 11241065 11241229 -60912653 + MER5A DNA MER1_type 1 189 0 734 270 75 40 chr20 11241632 11241980 -60911902 - Charlie7 DNA MER1_type -2118 494 135 361 233 34 10 chr20 11242709 11242844 -60911038 - L1ME1 LINE L1 -18 6148 6022 220 310 35 0 chr20 11243057 11243115 -60910767 + L2 LINE L2 3134 3193 -79 380 93 0 0 chr20 11243229 11243283 -60910599 - MLT1H LTR MaLR 0 549 496 475 163 39 137 chr20 11243285 11243438 -60910444 - MER58A DNA MER1_type -1 223 86 292 160 21 160 chr20 11243447 11243541 -60910341 + MLT1A1 LTR MaLR 1 81 -284 1328 137 25 0 chr20 11243541 11243782 -60910100 + L1MA4 LINE L1 6028 6274 -26 829 198 47 6 chr20 11243873 11244045 -60909837 + MLT1A1 LTR MaLR 170 348 -17 441 217 0 0 chr20 11244060 11244143 -60909739 - MER58A DNA MER1_type -24 83 1 365 319 18 9 chr20 11244316 11244429 -60909453 - MLT1J LTR MaLR -278 271 158 1580 238 107 0 chr20 11244844 11245468 -60908414 + L1ME2 LINE L1 5449 6162 -2 389 282 30 30 chr20 11246590 11246721 -60907161 + MIR SINE MIR 23 153 -109 210 344 147 8 chr20 11246843 11247102 -60906780 + L2 LINE L2 1944 2238 -1076 208 233 0 137 chr20 11248192 11248265 -60905617 + MER5A DNA MER1_type 121 183 -6 308 323 74 69 chr20 11249431 11249620 -60904262 - L2 LINE L2 -2 3270 3081 1738 112 62 25 chr20 11249632 11249941 -60903941 + AluSx SINE Alu 1 319 0 4514 129 71 13 chr20 11250302 11251122 -60902760 - L1MA4A LINE L1 -4 6299 5433 1982 146 20 64 chr20 11251477 11251634 -60902248 + MSTB LTR MaLR 41 203 -223 2150 121 0 16 chr20 11251634 11251948 -60901934 + AluSc SINE Alu 1 309 0 1982 146 20 64 chr20 11251948 11252194 -60901688 + MSTB LTR MaLR 203 426 0 234 0 0 0 chr20 11253299 11253325 -60900557 + (A)n Simple_repeat Simple_repeat 1 26 0 52 0 0 0 chr20 11253608 11253660 -60900222 + AT_rich Low_complexity Low_complexity 1 52 0 261 122 0 0 chr20 11253670 11253711 -60900171 - MLT1F LTR MaLR 0 542 502 1895 151 136 18 chr20 11253730 11254113 -60899769 + MSTA LTR MaLR 1 428 0 2095 251 25 2 chr20 11254113 11254628 -60899254 - MLT1F LTR MaLR -15 527 1 325 311 102 28 chr20 11254688 11254865 -60899017 - HAL1b LINE L1 -622 726 537 709 219 173 7 chr20 11254933 11255211 -60898671 - MER5C DNA MER1_type 0 324 1 227 106 43 43 chr20 11255230 11255277 -60898605 + MLT1J LTR MaLR 101 147 -364 2689 96 3 3 chr20 11255412 11255776 -60898106 + THE1B LTR MaLR 1 364 0 992 187 12 32 chr20 11255843 11256089 -60897793 + L1MA9 LINE L1 6067 6307 -5 11872 121 25 12 chr20 11256104 11256216 -60897666 + Tigger1 DNA MER2_type 3 112 -2306 2204 121 10 0 chr20 11256216 11256521 -60897361 - AluSx SINE Alu -4 308 1 11872 121 25 12 chr20 11256521 11258343 -60895539 + Tigger1 DNA MER2_type 112 1963 -455 388 244 0 11 chr20 11258534 11258624 -60895258 + Tigger1 DNA MER2_type 2326 2414 -4 323 291 18 0 chr20 11258764 11258874 -60895008 + LTR67 LTR ERVL 446 557 0 23 89 0 11 chr20 11259172 11259210 -60894672 + AT_rich Low_complexity Low_complexity 1 38 -51 2074 112 0 0 chr20 11259210 11259488 -60894394 - AluSq SINE Alu -18 295 18 23 89 0 11 chr20 11259488 11259539 -60894343 + AT_rich Low_complexity Low_complexity 38 89 0 204 132 0 26 chr20 11259751 11259789 -60894093 + (TCCA)n Simple_repeat Simple_repeat 4 40 0 595 325 42 14 chr20 11260892 11261104 -60892778 - MIR SINE MIR -25 237 20 1771 166 3 17 chr20 11261273 11261569 -60892313 + AluJo SINE Alu 1 292 -20 33 0 0 0 chr20 11261569 11261602 -60892280 + AT_rich Low_complexity Low_complexity 1 33 0 262 155 14 84 chr20 11261646 11261717 -60892165 - L1MC4a LINE L1 -1902 5906 5841 4770 211 66 34 chr20 11261726 11263308 -60890574 + L1MA5 LINE L1 3650 5282 -864 1894 155 31 0 chr20 11263315 11263605 -60890277 + AluJb SINE Alu 11 309 -3 5138 134 19 8 chr20 11263606 11264499 -60889383 + L1MA5 LINE L1 5392 6294 -6 400 296 157 9 chr20 11264766 11265084 -60888798 - LTR33A LTR ERVL -77 446 82 1916 119 7 11 chr20 11265490 11265776 -60888106 - AluSx SINE Alu -1 311 27 351 310 60 71 chr20 11265850 11266399 -60887483 - L1M4 LINE L1 -3212 2934 2392 1209 184 77 45 chr20 11266421 11266757 -60887125 - L1MB8 LINE L1 -1 6177 5831 * 1841 240 45 37 chr20 11266756 11267643 -60886239 - L1MDa LINE L1 -3339 3201 2314 30 45 0 0 chr20 11267958 11268002 -60885880 + AT_rich Low_complexity Low_complexity 1 44 0 1248 278 47 26 chr20 11268028 11268651 -60885231 - L1MDa LINE L1 -4547 1995 1360 606 293 72 26 chr20 11268683 11268990 -60884892 + MLT1K LTR MaLR 259 579 -9 184 159 0 68 chr20 11269240 11269284 -60884598 + L2 LINE L2 1783 1823 -1491 290 351 97 12 chr20 11269385 11269550 -60884332 - L2 LINE L2 0 3272 3094 2218 102 10 0 chr20 11269947 11270241 -60883641 + AluSx SINE Alu 1 297 -15 2011 133 7 13 chr20 11270854 11271156 -60882726 + AluSx SINE Alu 1 300 -12 990 256 185 19 chr20 11271582 11271812 -60882070 + LTR16C LTR ERVL 69 260 -231 1397 190 28 104 chr20 11271812 11272207 -60881675 + MLT1A1 LTR MaLR 1 365 0 2268 120 34 0 chr20 11272212 11272562 -60881320 + THE1B LTR MaLR 1 362 -2 990 256 185 19 chr20 11272562 11272688 -60881194 + LTR16C LTR ERVL 263 491 0 393 349 8 0 chr20 11272806 11272932 -60880950 + MIR SINE MIR 133 259 -3 835 165 0 0 chr20 11273119 11273246 -60880636 + FLAM_C SINE Alu 1 127 -6 438 237 91 56 chr20 11273438 11273670 -60880212 + L2 LINE L2 2953 3192 -121 22 0 0 0 chr20 11274648 11274670 -60879212 + AT_rich Low_complexity Low_complexity 1 22 0 395 205 54 52 chr20 11274853 11274980 -60878902 - Charlie8 DNA MER1_type -2141 276 152 449 293 57 0 chr20 11276264 11276387 -60877495 - L2 LINE L2 0 3272 3143 2250 74 3 14 chr20 11276672 11276982 -60876900 - AluSx SINE Alu 0 307 1 189 195 0 0 chr20 11277673 11277714 -60876168 + CT-rich Low_complexity Low_complexity 2 42 0 800 217 42 0 chr20 11278511 11278700 -60875182 - MER115 DNA AcHobo 0 693 497 192 293 52 0 chr20 11279034 11279092 -60874790 - L3b LINE CR1 -232 1351 1291 207 0 0 0 chr20 11279778 11279801 -60874081 + (GTTTG)n Simple_repeat Simple_repeat 2 24 0 186 133 0 0 chr20 11280054 11280084 -60873798 + (TG)n Simple_repeat Simple_repeat 2 31 0 383 176 28 28 chr20 11280110 11280218 -60873664 + LTR67 LTR ERVL 450 557 0 225 263 35 0 chr20 11280218 11280275 -60873607 + L2 LINE L2 3214 3272 0 1879 167 0 0 chr20 11280362 11280655 -60873227 - AluJb SINE Alu -19 293 1 382 290 71 45 chr20 11280685 11281122 -60872760 - L1ME4a LINE L1 -73 6048 5583 1916 148 3 17 chr20 11281122 11281419 -60872463 - AluSx SINE Alu -18 294 2 382 290 71 45 chr20 11281419 11281739 -60872143 - L1ME4a LINE L1 -538 5583 5273 243 279 51 0 chr20 11282124 11282203 -60871679 - L1ME4a LINE L1 -1314 4832 4750 222 237 10 52 chr20 11282238 11282335 -60871547 + C-rich Low_complexity Low_complexity 2 94 0 * 244 302 16 28 chr20 11282286 11282468 -60871414 + (CCA)n Simple_repeat Simple_repeat 1 180 0 330 277 71 22 chr20 11282556 11282740 -60871142 - L1ME4a LINE L1 -1556 4590 4398 33 56 0 0 chr20 11283617 11283671 -60870211 + AT_rich Low_complexity Low_complexity 1 54 0 209 286 114 0 chr20 11283700 11283770 -60870112 + L2 LINE L2 3187 3264 -8 186 292 0 0 chr20 11284015 11284063 -60869819 - L2 LINE L2 -1 3312 3265 491 287 164 60 chr20 11284177 11284706 -60869176 - L2 LINE L2 -338 2976 2393 1527 227 68 20 chr20 11285088 11285529 -60868353 + MLT1C LTR MaLR 6 467 0 427 300 19 44 chr20 11285652 11285811 -60868071 - MIR SINE MIR -66 196 43 181 348 29 14 chr20 11286554 11286623 -60867259 - MIR SINE MIR -104 104 35 243 88 0 0 chr20 11287037 11287071 -60866811 + (CA)n Simple_repeat Simple_repeat 1 34 0 315 190 101 0 chr20 11288246 11288325 -60865557 - MER5A DNA MER1_type -77 112 26 802 316 65 8 chr20 11289736 11290087 -60863795 - LTR16A LTR ERVL -79 371 1 2268 84 19 13 chr20 11291024 11291370 -60862512 + AluSx SINE Alu 1 348 0 1552 273 72 51 chr20 11291455 11291494 -60862388 + HAL1b LINE L1 115 152 -1196 780 231 53 48 chr20 11291494 11291702 -60862180 - MER63A DNA MER1_type 0 210 2 1552 273 72 51 chr20 11291702 11292869 -60861013 + HAL1b LINE L1 152 1346 -2 547 265 34 0 chr20 11292939 11293056 -60860826 + FLAM_A SINE Alu 1 121 -21 21 0 0 0 chr20 11293056 11293077 -60860805 + AT_rich Low_complexity Low_complexity 1 21 0 336 296 33 29 chr20 11293147 11293421 -60860461 + L1MD2 LINE L1 3249 3523 -2623 3406 230 44 64 chr20 11293536 11293705 -60860177 + L1MD2 LINE L1 3533 3704 -2442 518 149 0 0 chr20 11293705 11293779 -60860103 - AluSp SINE Alu -96 217 144 3406 230 44 64 chr20 11293779 11294974 -60858908 + L1MD2 LINE L1 3704 4946 -1200 4450 194 44 23 chr20 11295015 11295251 -60858631 + L1MB3 LINE L1 4018 4248 -1935 183 80 0 0 chr20 11295251 11295276 -60858606 + (CA)n Simple_repeat Simple_repeat 1 25 0 4450 194 44 23 chr20 11295276 11295486 -60858396 + L1MB3 LINE L1 4248 4452 -1731 2121 114 23 3 chr20 11295486 11295661 -60858221 - AluSx SINE Alu -7 305 120 387 0 0 0 chr20 11295661 11295704 -60858178 + (TG)n Simple_repeat Simple_repeat 2 44 0 2121 114 23 3 chr20 11295704 11295827 -60858055 - AluSx SINE Alu -192 120 1 4450 194 44 23 chr20 11295827 11295857 -60858025 + L1MB3 LINE L1 4452 4480 -1703 1986 141 116 38 chr20 11295857 11296254 -60857628 + MSTA LTR MaLR 1 428 0 4450 194 44 23 chr20 11296254 11297909 -60855973 + L1MB3 LINE L1 4480 6183 0 3744 196 53 21 chr20 11297901 11298566 -60855316 + L1MD2 LINE L1 4944 5669 -690 * 1434 199 75 41 chr20 11298566 11298928 -60854954 + MLT1A2 LTR MaLR 1 374 0 3744 196 53 21 chr20 11298928 11299409 -60854473 + L1MD2 LINE L1 5669 6133 -226 260 24 0 71 chr20 11299438 11299480 -60854402 + (CATATA)n Simple_repeat Simple_repeat 4 42 0 429 135 52 0 chr20 11299510 11299606 -60854276 + (TATG)n Simple_repeat Simple_repeat 2 102 0 414 146 37 0 chr20 11299629 11299711 -60854171 + (TA)n Simple_repeat Simple_repeat 1 85 0 210 37 0 0 chr20 11299711 11299738 -60854144 + (GA)n Simple_repeat Simple_repeat 2 28 0 590 200 48 0 chr20 11299739 11299864 -60854018 + L1MD2 LINE L1 6151 6281 -78 690 134 90 0 chr20 11299874 11300008 -60853874 + L1MD1 LINE L1 6091 6236 -6 2062 105 0 0 chr20 11300022 11300289 -60853593 + AluSq SINE Alu 1 267 -46 252 22 43 22 chr20 11300292 11300338 -60853544 + (TAAAA)n Simple_repeat Simple_repeat 4 50 0 905 154 101 0 chr20 11300338 11300487 -60853395 + AluSg/x SINE Alu 131 294 -18 403 338 120 71 chr20 11300519 11300547 -60853335 - L2 LINE L2 -13 3259 3234 1189 166 50 0 chr20 11300547 11300746 -60853136 + MER3 DNA MER1_type 1 209 0 403 338 120 71 chr20 11300746 11301283 -60852599 - L2 LINE L2 -38 3234 2725 1427 183 21 28 chr20 11301283 11301643 -60852239 + AluJo SINE Alu 1 358 0 403 338 120 71 chr20 11301643 11302332 -60851550 - L2 LINE L2 -547 2725 1964 1415 177 40 22 chr20 11302388 11302665 -60851217 + AluJo SINE Alu 1 282 -30 22 0 0 0 chr20 11304076 11304098 -60849784 + AT_rich Low_complexity Low_complexity 1 22 0 306 317 29 9 chr20 11304119 11304273 -60849609 + MIR SINE MIR 19 176 -66 233 252 36 18 chr20 11304377 11304442 -60849440 - MER5A DNA MER1_type -1 188 112 246 267 53 0 chr20 11304544 11304619 -60849263 + LTR16A LTR ERVL 25 103 -347 * 396 262 8 8 chr20 11304615 11304737 -60849145 + LTR16A LTR ERVL 329 450 0 180 378 77 14 chr20 11304944 11305087 -60848795 + L2 LINE L2 2910 3061 -211 200 306 139 56 chr20 11305330 11305438 -60848444 - MIR SINE MIR -109 153 37 21 57 0 0 chr20 11305447 11305482 -60848400 + AT_rich Low_complexity Low_complexity 1 35 0 1849 129 7 3 chr20 11305499 11305794 -60848088 + L1MC1 LINE L1 6037 6332 -1 322 298 11 0 chr20 11306768 11306862 -60847020 + MER68 LTR ERV1 450 544 -18 1363 243 27 17 chr20 11306863 11307275 -60846607 - L1ME3A LINE L1 -114 6056 5641 20669 26 0 0 chr20 11307276 11310511 -60843371 + L1PA2 LINE L1 2921 6155 0 24 0 0 0 chr20 11310511 11310535 -60843347 + AT_rich Low_complexity Low_complexity 1 24 0 785 289 65 31 chr20 11310535 11310826 -60843056 - LTR16C LTR ERVL -122 369 69 908 253 101 27 chr20 11311206 11311574 -60842308 - MLT1J LTR MaLR -109 402 8 623 147 108 0 chr20 11313313 11313415 -60840467 + FRAM SINE Alu 40 152 -24 900 125 0 0 chr20 11313935 11314055 -60839827 + FLAM_C SINE Alu 1 120 -23 775 337 55 37 chr20 11314750 11315186 -60838696 - L2 LINE L2 -449 2865 2422 827 308 56 17 chr20 11315295 11315655 -60838227 - LTR16C LTR ERVL -14 477 104 284 383 42 12 chr20 11316078 11316245 -60837637 + L3 LINE CR1 565 736 -841 352 272 201 38 chr20 11318138 11318322 -60835560 + MIR SINE MIR 48 261 -1 403 301 20 33 chr20 11318612 11318765 -60835117 - MLT1J2 LTR MaLR -298 152 2 24 32 0 0 chr20 11319272 11319303 -60834579 + AT_rich Low_complexity Low_complexity 1 31 0 253 312 21 0 chr20 11319400 11319493 -60834389 - MIR SINE MIR 0 262 168 1390 163 67 50 chr20 11319494 11319851 -60834031 + THE1C LTR MaLR 1 363 -12 587 265 46 0 chr20 11319855 11320006 -60833876 - MIR SINE MIR -90 172 15 585 211 6 43 chr20 11320868 11320935 -60832947 + L1MA10 LINE L1 6172 6240 -94 405 0 0 0 chr20 11320935 11320980 -60832902 + (TG)n Simple_repeat Simple_repeat 1 45 0 585 211 6 43 chr20 11320980 11321073 -60832809 + L1MA10 LINE L1 6240 6326 -8 1850 174 93 86 chr20 11321483 11321857 -60832025 + LTR8A LTR ERV1 1 382 -345 2231 100 0 13 chr20 11321857 11322157 -60831725 - AluY SINE Alu -14 297 2 1850 174 93 86 chr20 11322157 11322361 -60831521 + LTR8A LTR ERV1 382 583 -144 1437 180 102 29 chr20 11322361 11322813 -60831069 + LTR10A LTR ERV1 1 548 -61 688 175 6 81 chr20 11322826 11322986 -60830896 + LTR8A LTR ERV1 580 727 0 3994 273 78 28 chr20 11322993 11323051 -60830831 + L1M4b LINE L1 12 66 -6789 189 107 0 0 chr20 11323051 11323079 -60830803 + (TA)n Simple_repeat Simple_repeat 1 28 0 3994 273 78 28 chr20 11323079 11324699 -60829183 + L1M4b LINE L1 66 1775 -5080 2075 162 15 74 chr20 11324692 11325216 -60828666 + L1MC2 LINE L1 5815 6307 -37 * 505 267 59 16 chr20 11325456 11325643 -60828239 + L1ME3A LINE L1 5717 5911 -259 192 119 48 71 chr20 11325968 11325979 -60827903 + L3 LINE CR1 1534 1574 -3 205 97 0 0 chr20 11325979 11326010 -60827872 + MIR3 SINE MIR 171 201 -7 1611 155 59 41 chr20 11326514 11326804 -60827078 - AluJo SINE Alu -17 295 1 372 267 63 111 chr20 11326943 11327066 -60826816 + MLT1J LTR MaLR 43 170 -315 1607 186 0 35 chr20 11327066 11327378 -60826504 - AluJo SINE Alu -11 301 1 372 267 63 111 chr20 11327378 11327524 -60826358 + MLT1J LTR MaLR 170 338 -147 189 147 0 0 chr20 11328023 11328057 -60825825 + (GAAA)n Simple_repeat Simple_repeat 3 36 0 277 39 39 39 chr20 11328239 11328290 -60825592 + (CAAAA)n Simple_repeat Simple_repeat 4 54 0 1521 255 91 43 chr20 11328520 11328583 -60825299 + MLT1H1 LTR MaLR 1 60 -495 2216 111 3 0 chr20 11328583 11328871 -60825011 + AluSq SINE Alu 4 292 -21 1521 255 91 43 chr20 11328871 11329337 -60824545 + MLT1H1 LTR MaLR 60 555 0 200 31 62 0 chr20 11331324 11331356 -60822526 + T-rich Low_complexity Low_complexity 1 34 0 11415 30 0 1 chr20 11331359 11333478 -60820404 - L1PA4 LINE L1 -3 6152 4034 2744 96 0 0 chr20 11333934 11334298 -60819584 + THE1B LTR MaLR 1 364 0 319 281 31 10 chr20 11334475 11334571 -60819311 + L3 LINE CR1 1476 1573 -4 686 219 30 35 chr20 11334937 11335138 -60818744 + MER3 DNA MER1_type 9 208 -1 831 214 171 70 chr20 11336207 11336622 -60817260 - LTR16A1 LTR ERVL 0 457 1 283 214 14 57 chr20 11336976 11337046 -60816836 + L2 LINE L2 3247 3313 0 694 205 0 0 chr20 11337079 11337226 -60816656 - FLAM_A SINE Alu 0 147 1 2214 103 63 23 chr20 11337540 11337890 -60815992 - THE1B LTR MaLR 0 364 1 22 35 0 0 chr20 11337972 11338001 -60815881 + AT_rich Low_complexity Low_complexity 1 29 0 408 71 0 0 chr20 11338621 11338677 -60815205 + (TG)n Simple_repeat Simple_repeat 2 57 0 1051 207 163 3 chr20 11339262 11339635 -60814247 + Charlie4a DNA MER1_type 75 504 -4 2666 82 18 32 chr20 11339828 11339870 -60814012 - THE1C LTR MaLR 0 375 334 2373 89 0 0 chr20 11339870 11340172 -60813710 + AluY SINE Alu 1 302 -9 2666 82 18 32 chr20 11340172 11340509 -60813373 - THE1C LTR MaLR -41 334 1 216 359 58 81 chr20 11340509 11340548 -60813334 + L2 LINE L2 3040 3078 -194 2434 144 23 28 chr20 11340548 11340984 -60812898 + Tigger2a DNA MER2_type 1 434 0 216 359 58 81 chr20 11340984 11341167 -60812715 + L2 LINE L2 3078 3257 -15 207 299 68 77 chr20 11341698 11341815 -60812067 - L2 LINE L2 -1 3271 3156 1163 318 36 5 chr20 11341878 11342321 -60811561 - LTR16C LTR ERVL 0 491 35 332 254 28 42 chr20 11342423 11342565 -60811317 - L1MEc LINE L1 -3411 2804 2665 692 271 59 45 chr20 11342590 11343239 -60810643 - L1MEc LINE L1 -3616 2599 1978 21 36 0 0 chr20 11343292 11343320 -60810562 + AT_rich Low_complexity Low_complexity 1 28 0 481 322 124 0 chr20 11343321 11343563 -60810319 - L1MEc LINE L1 -4579 1817 1546 2335 75 0 0 chr20 11343660 11343940 -60809942 + AluY SINE Alu 1 280 -31 183 42 0 0 chr20 11343943 11343967 -60809915 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 348 307 91 17 chr20 11344649 11344825 -60809057 - L3b LINE CR1 -99 1484 1296 212 119 0 24 chr20 11345066 11345108 -60808774 + (TTC)n Simple_repeat Simple_repeat 1 41 0 309 217 14 0 chr20 11345154 11345223 -60808659 + MLT1J1 LTR MaLR 26 95 -351 746 169 0 0 chr20 11345302 11345440 -60808442 - FRAM SINE Alu 0 165 28 266 328 39 8 chr20 11345440 11345568 -60808314 + MLT1J2 LTR MaLR 97 228 -222 417 256 66 29 chr20 11345604 11345741 -60808141 + MLT1J2 LTR MaLR 291 432 -18 385 226 0 65 chr20 11345777 11345870 -60808012 + MIR SINE MIR 12 98 -164 302 241 48 12 chr20 11345889 11345972 -60807910 + MLT1J2 LTR MaLR 339 424 -26 2147 171 55 25 chr20 11346842 11347281 -60806601 + MLT1C LTR MaLR 16 467 0 267 276 71 0 chr20 11347283 11347381 -60806501 + MIR SINE MIR 142 246 -16 245 290 70 30 chr20 11347563 11347663 -60806219 - L3b LINE CR1 -339 1244 1141 460 312 65 5 chr20 11347773 11347972 -60805910 + LTR33 LTR ERVL 10 220 -301 867 158 26 7 chr20 11347976 11348128 -60805754 - FRAM SINE Alu -9 167 13 300 337 86 0 chr20 11348201 11348376 -60805506 + LTR33 LTR ERVL 332 521 0 775 328 52 27 chr20 11348383 11348786 -60805096 - LTR16C LTR ERVL -6 485 73 257 292 146 27 chr20 11349283 11349468 -60804414 - L2 LINE L2 0 3313 3107 356 88 18 0 chr20 11349471 11349528 -60804354 + (TG)n Simple_repeat Simple_repeat 2 59 0 848 232 17 25 chr20 11351958 11352199 -60801683 - LTR16C LTR ERVL 0 491 253 2412 93 3 3 chr20 11352327 11352639 -60801243 - AluSq SINE Alu -1 312 1 22 0 0 0 chr20 11354085 11354107 -60799775 + AT_rich Low_complexity Low_complexity 1 22 0 180 230 180 70 chr20 11354360 11354460 -60799422 + MIR SINE MIR 31 141 -67 213 121 0 0 chr20 11355035 11355068 -60798814 + (TC)n Simple_repeat Simple_repeat 1 33 0 21 0 0 0 chr20 11355835 11355856 -60798026 + AT_rich Low_complexity Low_complexity 1 21 0 402 39 0 0 chr20 11355878 11355930 -60797952 + (TG)n Simple_repeat Simple_repeat 2 53 0 2389 246 87 18 chr20 11356007 11357042 -60796840 - L1ME3A LINE L1 -5 6165 5052 665 159 40 7 chr20 11357481 11357632 -60796250 - MER3 DNA MER1_type 0 2585 2430 399 193 12 0 chr20 11357633 11357716 -60796166 - MER3 DNA MER1_type -95 114 31 448 242 222 7 chr20 11357813 11357966 -60795916 + MER5A DNA MER1_type 1 186 -3 464 254 24 16 chr20 11358421 11358547 -60795335 + L2 LINE L2 3187 3313 0 407 344 56 0 chr20 11358759 11358884 -60794998 + L2 LINE L2 3182 3313 0 357 207 35 35 chr20 11359381 11359468 -60794414 - MER94 DNA DNA -29 105 19 180 0 0 0 chr20 11361138 11361158 -60792724 + (T)n Simple_repeat Simple_repeat 1 20 0 932 238 60 31 chr20 11361555 11361715 -60792167 - L1ME3 LINE L1 -181 5981 5827 1818 173 3 0 chr20 11361715 11362004 -60791878 + AluJb SINE Alu 2 291 -21 932 238 60 31 chr20 11362004 11362194 -60791688 - L1ME3 LINE L1 -335 5827 5595 430 273 72 22 chr20 11362491 11362630 -60791252 + Charlie8 DNA MER1_type 87 232 -2185 1888 160 7 13 chr20 11363301 11363601 -60790281 + AluJo SINE Alu 1 298 -14 654 381 34 16 chr20 11364264 11364880 -60789002 - HERV16 LTR ERVL -3421 1575 949 2587 146 27 2 chr20 11364880 11365326 -60788556 + LTR32 LTR ERVL 15 471 0 762 218 46 60 chr20 11366550 11366766 -60787116 + MER20 DNA MER1_type 6 218 -1 808 269 40 54 chr20 11366818 11367130 -60786752 + L1ME LINE L1 5311 5615 -555 579 239 9 0 chr20 11367130 11367239 -60786643 - MER81 DNA DNA -1 113 4 808 269 40 54 chr20 11367239 11367446 -60786436 + L1ME LINE L1 5615 5823 -347 1747 152 0 92 chr20 11368056 11368392 -60785490 - AluJb SINE Alu -7 305 1 1522 174 85 0 chr20 11368706 11368988 -60784894 - AluJb SINE Alu -2 310 5 875 247 136 59 chr20 11369074 11369580 -60784302 + MLT1H LTR MaLR 4 548 -1 266 354 75 12 chr20 11369800 11369983 -60783899 + MIR SINE MIR 10 204 -58 250 295 39 0 chr20 11370019 11370097 -60783785 + MIR SINE MIR 176 256 -6 1032 281 60 45 chr20 11370144 11370628 -60783254 + LTR16C LTR ERVL 1 491 0 399 318 164 44 chr20 11372123 11372789 -60781093 + L2 LINE L2 2560 3313 0 329 333 66 61 chr20 11373191 11373389 -60780493 + L2 LINE L2 3052 3250 -22 1724 223 43 3 chr20 11373389 11373780 -60780102 + MER82 DNA MER2_type 1 407 -246 22 35 0 0 chr20 11373907 11373936 -60779946 + AT_rich Low_complexity Low_complexity 1 29 0 5839 152 17 3 chr20 11374041 11375740 -60778142 + L1MA4 LINE L1 4577 6295 -5 7558 34 0 0 chr20 11376231 11377636 -60776246 + L1PA5 LINE L1 4741 6147 -7 232 0 0 0 chr20 11377705 11377741 -60776141 + L1HS LINE L1 6120 6155 0 1852 167 3 7 chr20 11378386 11378691 -60775191 + AluJb SINE Alu 1 304 -8 291 238 48 67 chr20 11378832 11378937 -60774945 + MIR SINE MIR 49 151 -111 180 77 0 0 chr20 11379105 11379131 -60774751 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 2207 104 0 22 chr20 11379187 11379504 -60774378 - AluSx SINE Alu -2 310 1 776 216 202 18 chr20 11381806 11382148 -60771734 + Charlie4a DNA MER1_type 25 429 -79 2521 194 24 6 chr20 11382169 11382701 -60771181 + L1MB5 LINE L1 5625 6166 -8 2431 79 0 19 chr20 11382950 11383267 -60770615 + AluSx SINE Alu 1 311 -1 822 254 103 151 chr20 11383801 11383922 -60769960 - L2 LINE L2 -350 2964 2839 1941 84 25 4 chr20 11383922 11384221 -60769661 + AluY SINE Alu 1 305 0 822 254 103 151 chr20 11384221 11384329 -60769553 - L2 LINE L2 -475 2839 2727 1860 126 32 3 chr20 11384329 11384614 -60769268 - AluSx SINE Alu -17 295 3 822 254 103 151 chr20 11384614 11385032 -60768850 - L2 LINE L2 -587 2727 2346 232 239 0 91 chr20 11385038 11385126 -60768756 + MLT1H LTR MaLR 8 87 -462 1111 255 104 12 chr20 11385983 11386387 -60767495 + MER69 DNA AcHobo 1 441 -785 1406 130 8 4 chr20 11386389 11386635 -60767247 + L1MA2 LINE L1 6058 6304 0 25 0 0 0 chr20 11386635 11386660 -60767222 + AT_rich Low_complexity Low_complexity 1 25 0 2324 219 65 29 chr20 11386868 11387801 -60766081 + MER69 DNA AcHobo 1457 2423 -103 1285 61 0 0 chr20 11388262 11388425 -60765457 + L1PA8 LINE L1 6005 6167 -5 2385 199 71 43 chr20 11388910 11389228 -60764654 - L1MC4a LINE L1 -470 7338 7030 267 79 0 0 chr20 11389228 11389266 -60764616 + (TTTA)n Simple_repeat Simple_repeat 4 41 0 2385 199 71 43 chr20 11389266 11389587 -60764295 - L1MC4a LINE L1 -778 7030 6674 1640 187 36 33 chr20 11389587 11389951 -60763931 + MLT1A1 LTR MaLR 1 365 0 2385 199 71 43 chr20 11389951 11390025 -60763857 - L1MC4a LINE L1 -1134 6674 6604 1227 206 77 36 chr20 11390059 11390301 -60763581 + L1MD3 LINE L1 7570 7835 -160 791 221 101 29 chr20 11390301 11390509 -60763373 + MER58A DNA MER1_type 1 223 -1 1227 206 77 36 chr20 11390509 11390654 -60763228 + L1MD3 LINE L1 7835 7973 -22 1377 96 0 6 chr20 11390654 11390831 -60763051 + AluY SINE Alu 118 293 -18 370 262 9 0 chr20 11390844 11390951 -60762931 + Charlie8 DNA MER1_type 62 169 -2248 457 246 116 101 chr20 11390999 11391345 -60762537 + MLT1J LTR MaLR 8 358 -153 1178 143 71 25 chr20 11391403 11391599 -60762283 + AluJb SINE Alu 95 299 -13 32 26 0 0 chr20 11391736 11391775 -60762107 + AT_rich Low_complexity Low_complexity 1 39 0 1387 159 72 4 chr20 11392815 11393092 -60760790 - MER33 DNA MER1_type -22 302 7 443 172 97 30 chr20 11393973 11394107 -60759775 - L1ME4a LINE L1 -5 6116 5974 260 390 25 8 chr20 11394648 11394766 -60759116 - L2 LINE L2 -15 3257 3138 491 97 10 40 chr20 11394873 11394967 -60758915 - L1MA9 LINE L1 -35 6256 6162 2059 146 7 0 chr20 11394968 11395329 -60758553 - AluSx SINE Alu 0 363 1 182 36 0 36 chr20 11395474 11395502 -60758380 + (TAAAAA)n Simple_repeat Simple_repeat 2 28 0 318 106 0 0 chr20 11396120 11396167 -60757715 + (CA)n Simple_repeat Simple_repeat 2 48 0 376 299 48 0 chr20 11396713 11396860 -60757022 + L1ME1 LINE L1 439 592 -6015 1408 238 12 56 chr20 11396912 11397324 -60756558 + L1ME1 LINE L1 590 983 -5624 916 120 0 23 chr20 11397325 11397458 -60756424 + AluSq/x SINE Alu 1 130 -183 2170 117 3 0 chr20 11397487 11397785 -60756097 - AluSp SINE Alu -14 299 1 482 289 39 26 chr20 11397785 11398017 -60755865 + L1ME1 LINE L1 1347 1581 -5026 509 227 81 38 chr20 11398017 11398202 -60755680 - MER95 LTR ERV 0 431 239 585 293 57 7 chr20 11398409 11398692 -60755190 + L1ME1 LINE L1 1404 1700 -4726 * 1546 211 65 12 chr20 11398673 11399173 -60754709 + L1ME1 LINE L1 2387 2868 -3558 3168 218 16 57 chr20 11399212 11399445 -60754437 + L1ME1 LINE L1 5576 5817 -629 2241 88 0 7 chr20 11399445 11399765 -60754117 + AluSc SINE Alu 1 318 0 3168 218 16 57 chr20 11399765 11400392 -60753490 + L1ME1 LINE L1 5817 6402 -44 225 0 0 0 chr20 11400403 11400428 -60753454 + (TG)n Simple_repeat Simple_repeat 2 26 0 612 221 16 0 chr20 11400469 11400596 -60753286 - MER3 DNA MER1_type -74 135 7 723 253 128 43 chr20 11402013 11402318 -60751564 + MLT1H LTR MaLR 25 355 -194 233 246 15 0 chr20 11402371 11402436 -60751446 + MLT1J2 LTR MaLR 363 428 -22 250 196 0 0 chr20 11402490 11402536 -60751346 + MIR3 SINE MIR 139 184 -24 242 292 0 0 chr20 11402810 11402875 -60751007 + GA-rich Low_complexity Low_complexity 3 67 0 476 321 6 22 chr20 11403071 11403251 -60750631 + MIR SINE MIR 30 205 -57 1695 176 0 28 chr20 11404670 11405030 -60748852 + AluJo SINE Alu 1 351 0 1757 226 43 14 chr20 11405366 11405857 -60748025 + MLT1D LTR MaLR 1 505 0 444 260 21 0 chr20 11407246 11407342 -60746540 - MER5A DNA MER1_type -80 109 12 495 204 2 0 chr20 11408030 11408134 -60745748 - L1ME3 LINE L1 -20 6150 6044 583 183 147 63 chr20 11408135 11408326 -60745556 + MER3 DNA MER1_type 3 209 0 14591 35 0 1 chr20 11408363 11410139 -60743743 + L1P LINE L1 3083 4857 -1289 735 217 15 40 chr20 11410209 11410301 -60743581 - L1ME3 LINE L1 -25 6137 6044 742 174 117 61 chr20 11410301 11410497 -60743385 + MER3 DNA MER1_type 3 209 0 735 217 15 40 chr20 11410497 11410602 -60743280 - L1ME3 LINE L1 -118 6044 5945 227 191 24 0 chr20 11411274 11411316 -60742566 + MER5C DNA MER1_type 34 76 -248 221 301 14 0 chr20 11411452 11411525 -60742357 - MER5C DNA MER1_type -250 74 1 27 49 0 0 chr20 11411931 11411972 -60741910 + AT_rich Low_complexity Low_complexity 1 41 0 487 313 115 58 chr20 11412141 11412575 -60741307 - LTR67 LTR ERVL -4 553 95 217 232 28 160 chr20 11413478 11413659 -60740223 - L2 LINE L2 -10 3303 3147 217 409 44 10 chr20 11413686 11413889 -60739993 - L2 LINE L2 -252 3061 2852 548 280 54 6 chr20 11413938 11414106 -60739776 - L2 LINE L2 -579 2735 2560 627 127 28 4 chr20 11414110 11414233 -60739649 + L1MA5 LINE L1 6164 6294 -3 1449 221 91 47 chr20 11414312 11414827 -60739055 + MLT1H LTR MaLR 12 549 0 1021 183 14 10 chr20 11415409 11415617 -60738265 + LTR16A1 LTR ERVL 247 455 -2 2935 170 55 86 chr20 11415754 11416467 -60737415 - LTR8 LTR ERV1 0 691 1 326 272 167 0 chr20 11417502 11417664 -60736218 + L2 LINE L2 3120 3308 -5 945 188 54 89 chr20 11418026 11418362 -60735520 + MER33 DNA MER1_type 1 324 0 1542 271 30 12 chr20 11418402 11418808 -60735074 + LTR16C LTR ERVL 79 491 0 534 251 79 54 chr20 11420105 11420308 -60733574 - MER63A DNA MER1_type -1 209 2 477 158 79 10 chr20 11421072 11421173 -60732709 - MER5A DNA MER1_type -38 151 44 1813 157 0 7 chr20 11422244 11422524 -60731358 - AluSx SINE Alu 0 312 35 1752 169 14 35 chr20 11422919 11423286 -60730596 + L1MA10 LINE L1 4439 4797 -1349 372 224 26 26 chr20 11423290 11423406 -60730476 + L1MA9 LINE L1 6167 6282 -30 371 203 0 40 chr20 11423416 11423490 -60730392 - L1MC3 LINE L1 -652 7133 7063 4996 185 24 34 chr20 11423499 11425052 -60728830 + L1MA10 LINE L1 4793 6333 -1 2175 226 60 83 chr20 11425290 11426182 -60727700 - L1MC4 LINE L1 0 8042 7171 261 315 44 19 chr20 11426687 11426860 -60727022 + MLT1I LTR MaLR 273 401 -8 419 250 152 8 chr20 11427089 11427221 -60726661 - MER63A DNA MER1_type -2 208 58 453 225 45 9 chr20 11427415 11427526 -60726356 + L1ME3A LINE L1 5651 5765 -405 2357 96 0 0 chr20 11427526 11427829 -60726053 + AluSc SINE Alu 1 303 -6 248 232 40 0 chr20 11427829 11427928 -60725954 + (TA)n Simple_repeat Simple_repeat 2 104 0 240 208 30 0 chr20 11427941 11428042 -60725840 + (TA)n Simple_repeat Simple_repeat 2 105 0 304 226 118 54 chr20 11428050 11428143 -60725739 + L1MC4 LINE L1 6613 6711 -1331 960 213 96 60 chr20 11428150 11428484 -60725398 + L1ME3A LINE L1 5791 6136 -34 343 296 235 26 chr20 11428959 11429189 -60724693 + L2 LINE L2 3016 3293 -20 1216 132 13 9 chr20 11429363 11429582 -60724300 + L1PA16 LINE L1 5668 5886 -280 262 146 0 0 chr20 11429793 11429834 -60724048 - L1PA11 LINE L1 -9 6165 6125 965 134 56 0 chr20 11429836 11430058 -60723824 + L1PA16 LINE L1 5894 6157 -9 2097 125 0 25 chr20 11430085 11430405 -60723477 + AluSx SINE Alu 1 312 0 23 0 0 0 chr20 11430507 11430530 -60723352 + AT_rich Low_complexity Low_complexity 1 23 0 2497 284 69 14 chr20 11431550 11432403 -60721479 - L2 LINE L2 -1522 1792 893 350 266 26 88 chr20 11432680 11432793 -60721089 - MIR3 SINE MIR -28 180 80 369 192 13 0 chr20 11432852 11432930 -60720952 - MER116 DNA Mariner -1 79 1 1733 159 7 45 chr20 11432996 11433305 -60720577 - AluJb SINE Alu -15 297 1 1737 176 7 3 chr20 11433350 11433646 -60720236 + AluJb SINE Alu 10 306 -6 437 267 50 0 chr20 11434414 11434534 -60719348 + LTR16C LTR ERVL 147 272 -219 1810 44 0 9 chr20 11434821 11435047 -60718835 - L1PA5 LINE L1 0 6154 5931 599 285 84 0 chr20 11435319 11435498 -60718384 - MIR SINE MIR -48 214 21 1918 222 126 35 chr20 11435913 11436290 -60717592 + L1ME2 LINE L1 5441 5782 -382 1732 101 7 47 chr20 11436290 11436568 -60717314 + AluY SINE Alu 45 311 0 1918 222 126 35 chr20 11436568 11436848 -60717034 + L1ME2 LINE L1 5782 6158 -6 186 71 0 0 chr20 11437117 11437145 -60716737 + (TTTTTA)n Simple_repeat Simple_repeat 2 29 0 546 301 75 19 chr20 11437656 11437869 -60716013 - MIR SINE MIR -18 244 20 320 273 239 17 chr20 11437898 11438012 -60715870 - L2 LINE L2 0 3313 3226 1892 199 127 40 chr20 11438012 11438530 -60715352 + MLT1F1 LTR MaLR 1 563 -4 320 273 239 17 chr20 11438530 11438653 -60715229 - L2 LINE L2 -87 3226 3023 413 209 0 55 chr20 11438661 11438752 -60715130 + FLAM_A SINE Alu 1 86 -56 253 314 43 71 chr20 11438769 11438841 -60715041 - L2 LINE L2 -1366 1948 1875 2347 119 28 0 chr20 11438841 11439195 -60714687 + THE1B LTR MaLR 1 364 0 253 314 43 71 chr20 11439195 11439332 -60714550 - L2 LINE L2 -1439 1875 1745 1538 227 0 3 chr20 11439818 11440122 -60713760 - AluJo SINE Alu -9 303 1 31 26 0 0 chr20 11440934 11440972 -60712910 + AT_rich Low_complexity Low_complexity 1 38 0 273 188 71 24 chr20 11442079 11442164 -60711718 - Charlie7 DNA MER1_type -25 2587 2499 2093 257 67 36 chr20 11443078 11443909 -60709973 + L2 LINE L2 2250 3096 -217 417 253 0 0 chr20 11444029 11444120 -60709762 - MER104 DNA Tc2 -89 91 1 337 333 91 38 chr20 11444232 11444418 -60709464 - L2 LINE L2 -1 3271 3076 2214 110 3 22 chr20 11444501 11444820 -60709062 - AluSp SINE Alu 0 313 1 376 269 39 105 chr20 11445808 11446113 -60707769 - L2 LINE L2 -880 2434 2150 205 200 0 0 chr20 11446366 11446406 -60707476 + A-rich Low_complexity Low_complexity 1 40 0 287 327 10 0 chr20 11447580 11447684 -60706198 - MLT1L LTR MaLR -165 450 346 248 185 19 19 chr20 11447792 11447846 -60706036 - LTR67 LTR ERVL -405 152 99 377 236 135 1 chr20 11448090 11448223 -60705659 - L1ME2 LINE L1 0 6164 6016 285 292 0 0 chr20 11448747 11448819 -60705063 - MIR SINE MIR -120 142 71 416 346 28 11 chr20 11448835 11449017 -60704865 + L2 LINE L2 2837 3021 -292 262 173 96 0 chr20 11449118 11449170 -60704712 + MIR SINE MIR 90 146 -116 366 23 0 0 chr20 11449204 11449247 -60704635 + (TG)n Simple_repeat Simple_repeat 2 44 0 1097 152 33 6 chr20 11449256 11449529 -60704353 + MER63 DNA MER1_type 1 974 -86 1652 174 24 0 chr20 11452094 11452381 -60701501 - AluJo SINE Alu -16 296 3 397 340 82 42 chr20 11452558 11453008 -60700874 + L2 LINE L2 2013 2480 -834 270 324 95 56 chr20 11453421 11453705 -60700177 + L2 LINE L2 2920 3214 -58 302 0 0 0 chr20 11455071 11455108 -60698774 - L1PA8 LINE L1 -807 5339 5303 6262 75 4 4 chr20 11455108 11455936 -60697946 + L1PA8 LINE L1 5336 6165 -7 250 355 152 15 chr20 11455938 11456273 -60697609 - L2 LINE L2 -2216 1098 718 280 232 43 0 chr20 11457134 11457203 -60696679 + L2 LINE L2 3241 3312 -1 517 312 144 40 chr20 11457644 11458428 -60695454 - L2 LINE L2 -12 3301 2430 3542 30 0 0 chr20 11458454 11458899 -60694983 - L1P2 LINE L1 -480 5674 5230 2793 44 0 0 chr20 11458899 11459236 -60694646 + L1PA5 LINE L1 5809 6147 -7 183 100 0 0 chr20 11459267 11459297 -60694585 + (TAAAA)n Simple_repeat Simple_repeat 2 31 0 876 309 215 38 chr20 11459299 11460374 -60693508 - L2 LINE L2 -907 2407 1098 869 191 11 37 chr20 11460374 11460562 -60693320 + MER5A DNA MER1_type 4 186 -3 876 309 215 38 chr20 11460562 11460681 -60693201 - L2 LINE L2 -2216 1098 1001 324 334 169 20 chr20 11460947 11461291 -60692591 + L3 LINE CR1 829 1223 -354 1111 171 6 0 chr20 11461375 11461551 -60692331 + AluSc SINE Alu 131 307 -2 26 30 0 0 chr20 11462902 11462935 -60690947 + AT_rich Low_complexity Low_complexity 1 33 0 228 134 15 45 chr20 11463059 11463126 -60690756 + (CATATA)n Simple_repeat Simple_repeat 2 66 0 21 36 0 0 chr20 11463168 11463196 -60690686 + AT_rich Low_complexity Low_complexity 1 28 0 258 105 0 0 chr20 11464481 11464519 -60689363 + (TATATG)n Simple_repeat Simple_repeat 1 38 0 499 240 212 7 chr20 11465645 11465791 -60688091 + MER5A DNA MER1_type 14 189 0 182 328 0 45 chr20 11465814 11465881 -60688001 + MER5A DNA MER1_type 39 102 -87 1750 207 22 5 chr20 11465945 11466346 -60687536 + L1MB7 LINE L1 4784 5191 -955 852 166 0 14 chr20 11466351 11466496 -60687386 + FLAM_C SINE Alu 1 143 0 4332 154 28 33 chr20 11466502 11467436 -60686446 + L1MB7 LINE L1 5185 6110 -74 1949 140 7 0 chr20 11467562 11467717 -60686165 - AluSx SINE Alu -25 287 128 243 0 0 0 chr20 11467717 11467744 -60686138 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1949 140 7 0 chr20 11467744 11467873 -60686009 - AluSx SINE Alu -184 128 1 2542 196 33 4 chr20 11468355 11468846 -60685036 - MLT1D LTR MaLR 0 505 1 317 313 90 17 chr20 11468935 11469190 -60684692 + L1ME LINE L1 5473 5749 -415 645 266 149 34 chr20 11469192 11469347 -60684535 + MLT1J2 LTR MaLR 1 137 -313 261 0 0 0 chr20 11469347 11469376 -60684506 + (TAA)n Simple_repeat Simple_repeat 2 30 0 645 266 149 34 chr20 11469376 11469569 -60684313 + MLT1J2 LTR MaLR 137 389 -61 2595 173 99 24 chr20 11469903 11470488 -60683394 + L1MB7 LINE L1 5556 6184 0 266 264 11 65 chr20 11470745 11470863 -60683019 + MER5B DNA MER1_type 7 129 -60 180 354 0 31 chr20 11470890 11470986 -60682896 - L3 LINE CR1 -565 1012 920 279 285 208 0 chr20 11471697 11471827 -60682055 + MER5B DNA MER1_type 1 157 -21 1225 197 104 7 chr20 11471875 11472154 -60681728 + AluJb SINE Alu 1 306 -6 374 169 24 0 chr20 11472417 11472500 -60681382 + (CATA)n Simple_repeat Simple_repeat 2 86 0 322 301 73 15 chr20 11473435 11473571 -60680311 + MIR SINE MIR 25 168 -94 284 214 29 14 chr20 11473681 11473751 -60680131 - L2 LINE L2 -9 3304 3234 1934 223 74 67 chr20 11473753 11474282 -60679600 + L1ME1 LINE L1 5175 5713 -453 1469 141 11 0 chr20 11474282 11474551 -60679331 + L1MA4 LINE L1 6029 6300 0 1934 223 74 67 chr20 11474551 11474929 -60678953 + L1ME1 LINE L1 5713 6087 -79 1167 212 111 12 chr20 11475100 11475524 -60678358 + L1ME3A LINE L1 5665 6160 -10 322 336 49 30 chr20 11475532 11475862 -60678020 - L2 LINE L2 -208 3105 2717 953 233 28 31 chr20 11476029 11476346 -60677536 - HsTC2 DNA Tc2 -4 1894 1579 2560 139 21 16 chr20 11476432 11476862 -60677020 - MSTB1 LTR MaLR 0 432 1 274 125 0 0 chr20 11477767 11477807 -60676075 + LTR56 LTR ERV1 349 388 -57 26 0 0 0 chr20 11477807 11477833 -60676049 + AT_rich Low_complexity Low_complexity 1 26 0 197 240 0 20 chr20 11477833 11477883 -60675999 + MIR SINE MIR 136 184 -78 2234 190 102 39 chr20 11477922 11478399 -60675483 + MLT2B1 LTR ERVL 1 414 0 784 167 0 0 chr20 11478585 11478705 -60675177 + FLAM_A SINE Alu 1 120 -13 27 49 0 0 chr20 11478716 11478757 -60675125 + AT_rich Low_complexity Low_complexity 1 41 0 181 263 75 0 chr20 11478923 11479003 -60674879 - MIR SINE MIR -4 258 173 * 368 261 89 64 chr20 11478987 11479190 -60674692 - L2 LINE L2 0 3313 3106 224 365 65 6 chr20 11479215 11479385 -60674497 - MIR SINE MIR -81 181 2 2178 159 27 12 chr20 11479667 11480069 -60673813 + MER31A LTR ERV1 61 468 -17 517 296 18 84 chr20 11481156 11481430 -60672452 + MLT1K LTR MaLR 13 268 -320 375 328 21 6 chr20 11482115 11482273 -60671609 + MIR SINE MIR 25 183 -62 751 292 133 15 chr20 11482291 11482626 -60671256 - MLT1J2 LTR MaLR -8 442 53 21 36 0 0 chr20 11482939 11482967 -60670915 + AT_rich Low_complexity Low_complexity 1 28 0 2972 136 57 73 chr20 11483180 11483811 -60670071 - LTR29 LTR ERV1 0 622 2 882 175 16 58 chr20 11483980 11484169 -60669713 - MER5A DNA MER1_type -8 181 1 1150 321 22 34 chr20 11484180 11484685 -60669197 + L2 LINE L2 2813 3311 -2 647 237 27 82 chr20 11486185 11486404 -60667478 - MER63A DNA MER1_type -3 207 1 1592 259 133 8 chr20 11486421 11486895 -60666987 + MLT1H LTR MaLR 14 546 -3 376 363 47 12 chr20 11487161 11487332 -60666550 + L2 LINE L2 2849 3025 -288 518 209 92 12 chr20 11487403 11487566 -60666316 - Charlie5 DNA MER1_type 0 2620 2445 2002 212 32 13 chr20 11487575 11488037 -60665845 + L1MD2 LINE L1 5673 6143 -216 260 256 11 44 chr20 11488036 11488126 -60665756 + L1MD1 LINE L1 6079 6165 -77 * 787 240 112 16 chr20 11488245 11488478 -60665404 - MIR SINE MIR 0 262 15 276 111 22 0 chr20 11488784 11488829 -60665053 - L2 LINE L2 -4 3309 3264 333 355 61 43 chr20 11488893 11488977 -60664905 + L1MC4a LINE L1 5529 5610 -2198 2037 146 77 8 chr20 11488977 11489340 -60664542 + MLT1B LTR MaLR 3 390 0 333 355 61 43 chr20 11489340 11489582 -60664300 + L1MC4a LINE L1 5610 5861 -1947 345 323 45 23 chr20 11489825 11490045 -60663837 - L2 LINE L2 -515 2799 2575 522 342 41 24 chr20 11490302 11490597 -60663285 - L2 LINE L2 -449 2865 2566 1221 215 138 38 chr20 11490598 11490783 -60663099 + MLT1D LTR MaLR 1 166 -339 1971 119 9 55 chr20 11490783 11491110 -60662772 + AluSx SINE Alu 1 312 0 1221 215 138 38 chr20 11491110 11491382 -60662500 + MLT1D LTR MaLR 166 505 0 316 309 100 36 chr20 11491415 11491716 -60662166 - L2 LINE L2 -778 2536 2217 667 157 0 0 chr20 11493403 11493518 -60660364 - L1MB3 LINE L1 -8 6175 6061 764 265 46 14 chr20 11493747 11493966 -60659916 - MIR SINE MIR -22 240 15 361 258 187 7 chr20 11494589 11494744 -60659138 - LTR33 LTR ERVL -311 210 28 591 293 41 62 chr20 11495042 11495284 -60658598 + MIR SINE MIR 21 257 -5 267 271 141 0 chr20 11495755 11495840 -60658042 - MER103 DNA DNA -68 98 2 294 255 20 31 chr20 11496339 11496410 -60657472 + MIR SINE MIR 96 167 -95 2886 208 25 18 chr20 11496410 11496964 -60656918 + MER68 LTR ERV1 3 560 -2 294 255 20 31 chr20 11496964 11496990 -60656892 + MIR SINE MIR 167 192 -70 607 283 206 28 chr20 11498014 11498474 -60655408 - MLT1H LTR MaLR -7 542 1 420 228 138 42 chr20 11498980 11499169 -60654713 - L2 LINE L2 -10 3303 3097 2449 63 0 7 chr20 11499170 11499470 -60654412 + AluY SINE Alu 1 298 -13 223 302 81 0 chr20 11499610 11499696 -60654186 - MIR SINE MIR -123 139 47 252 277 134 18 chr20 11499943 11500055 -60653827 - MIR SINE MIR -4 258 134 285 176 140 118 chr20 11500130 11500266 -60653616 - MLT1J2 LTR MaLR 0 450 366 371 277 73 59 chr20 11500289 11500509 -60653373 - MLT1I LTR MaLR -123 286 64 204 269 0 0 chr20 11501378 11501471 -60652411 + (TA)n Simple_repeat Simple_repeat 2 94 0 1887 76 15 23 chr20 11502638 11502901 -60650981 + L1P2 LINE L1 5395 5655 -500 4420 114 14 163 chr20 11502901 11504491 -60649391 + pTR5 LTR ERV1 743 2606 0 4353 38 0 10 chr20 11504491 11504996 -60648886 + L1PA4 LINE L1 5652 6151 -4 1140 178 0 0 chr20 11506353 11506533 -60647349 - MER5A DNA MER1_type 0 189 10 221 338 27 0 chr20 11506799 11506873 -60647009 - L3 LINE CR1 -1089 488 413 771 237 68 0 chr20 11506904 11507081 -60646801 - MER5A DNA MER1_type 0 189 1 22 0 0 0 chr20 11507481 11507503 -60646379 + AT_rich Low_complexity Low_complexity 1 22 0 363 225 83 31 chr20 11507557 11507762 -60646120 + Charlie1 DNA MER1_type 1 244 -2517 1463 174 14 33 chr20 11507763 11508039 -60645843 + AluJo SINE Alu 14 284 -28 590 120 112 16 chr20 11508044 11508169 -60645713 + Charlie1 DNA MER1_type 2624 2760 -1 323 345 22 21 chr20 11509434 11509667 -60644215 - L2 LINE L2 -307 3006 2777 288 351 54 43 chr20 11512006 11512191 -60641691 - MIR SINE MIR -64 198 12 245 371 0 11 chr20 11512283 11512372 -60641510 - MIR3 SINE MIR -54 154 67 1849 242 74 42 chr20 11513330 11513900 -60639982 - MLT1E LTR MaLR -2 591 4 847 236 43 119 chr20 11513909 11514635 -60639247 - MLT1E-int LTR MaLR -25 1710 692 928 236 61 15 chr20 11514866 11515265 -60638617 - MLT1E-int LTR MaLR -791 580 48 788 194 49 93 chr20 11515265 11515436 -60638446 + MLT1B LTR MaLR 1 159 -231 783 147 0 91 chr20 11515436 11515579 -60638303 + FLAM_C SINE Alu 4 133 0 788 194 49 93 chr20 11515579 11515654 -60638228 + MLT1B LTR MaLR 159 236 -154 360 78 0 20 chr20 11515647 11515698 -60638184 + MLT1B LTR MaLR 340 389 -1 * 325 160 0 0 chr20 11515699 11515749 -60638133 - MLT1E-int LTR MaLR -1319 52 3 996 191 115 68 chr20 11515751 11516003 -60637879 - MLT1E LTR MaLR 0 593 330 469 319 103 7 chr20 11515993 11516275 -60637607 - LTR16C LTR ERVL -94 397 89 * 276 311 238 8 chr20 11516379 11516501 -60637381 - L2 LINE L2 -1 3271 3122 744 222 51 37 chr20 11516684 11516900 -60636982 + MIR SINE MIR 2 220 -42 2364 106 0 0 chr20 11517130 11517442 -60636440 + AluSx SINE Alu 1 312 0 1475 213 164 65 chr20 11518211 11518737 -60635145 - MER119 DNA MER1_type 0 583 6 186 174 0 0 chr20 11518770 11518816 -60635066 + T-rich Low_complexity Low_complexity 1 46 0 1091 172 11 6 chr20 11519314 11519488 -60634394 + FAM SINE Alu 1 175 0 239 234 0 11 chr20 11519913 11520007 -60633875 + (TGG)n Simple_repeat Simple_repeat 2 94 0 381 267 114 34 chr20 11520224 11520400 -60633482 - MIR SINE MIR -59 203 14 586 273 107 27 chr20 11521013 11521313 -60632569 - L1ME LINE L1 -527 5639 5316 2170 159 6 15 chr20 11522196 11522536 -60631346 - MER1B DNA MER1_type 0 337 1 742 224 93 0 chr20 11522605 11522788 -60631094 + MER3 DNA MER1_type 2 201 -8 255 212 45 0 chr20 11522742 11522808 -60631074 - MER3 DNA MER1_type -106 103 35 * 814 271 46 57 chr20 11522981 11523369 -60630513 - LTR16A1 LTR ERVL -2 455 72 21 0 0 0 chr20 11523633 11523654 -60630228 + AT_rich Low_complexity Low_complexity 1 21 0 363 44 0 0 chr20 11524070 11524115 -60629767 + (TC)n Simple_repeat Simple_repeat 2 46 0 26 0 0 0 chr20 11524138 11524164 -60629718 + AT_rich Low_complexity Low_complexity 1 26 0 209 319 43 32 chr20 11524761 11524855 -60629027 - L2 LINE L2 -41 3272 3178 190 315 70 49 chr20 11525036 11525179 -60628703 + L3 LINE CR1 1106 1251 -326 390 335 65 40 chr20 11525207 11525485 -60628397 + L3 LINE CR1 1178 1462 -115 1963 148 30 0 chr20 11525834 11526137 -60627745 + AluJb SINE Alu 1 312 0 2350 91 0 26 chr20 11526344 11526653 -60627229 + AluSg SINE Alu 1 301 -9 2590 59 0 0 chr20 11527203 11527507 -60626375 + AluY SINE Alu 2 305 -6 214 211 70 42 chr20 11527648 11527719 -60626163 - MER5A DNA MER1_type -28 161 89 411 273 175 0 chr20 11528403 11528557 -60625325 + MER5A DNA MER1_type 8 188 -1 278 339 165 27 chr20 11528639 11528863 -60625019 + MIR SINE MIR 2 256 -6 786 253 155 43 chr20 11528930 11529421 -60624461 + MLT1H1 LTR MaLR 10 555 0 245 250 19 0 chr20 11529482 11529534 -60624348 + MER58A DNA MER1_type 1 53 -171 2998 157 26 4 chr20 11529549 11530052 -60623830 - L1MC1 LINE L1 0 6333 5820 8476 156 51 23 chr20 11530053 11531894 -60621988 - L1MCa LINE L1 -4415 2011 29 792 223 18 18 chr20 11531903 11532069 -60621813 + MER58A DNA MER1_type 43 208 -16 368 296 227 29 chr20 11532082 11532322 -60621560 - L2 LINE L2 -49 3264 3073 3014 126 5 5 chr20 11532322 11532750 -60621132 + MSTA LTR MaLR 1 428 0 368 296 227 29 chr20 11532750 11532884 -60620998 - L2 LINE L2 -240 3073 2816 573 293 59 13 chr20 11533062 11533298 -60620584 - LTR16A1 LTR ERVL -12 445 199 1105 237 87 82 chr20 11533298 11533847 -60620035 - MER34B LTR ERV1 0 565 14 748 235 55 102 chr20 11533925 11534308 -60619574 - MLT1A1 LTR MaLR 0 365 1 246 197 0 33 chr20 11536680 11536741 -60617141 - L1MC4 LINE L1 0 8042 7984 2073 169 34 20 chr20 11536812 11537168 -60616714 + MLT1A1 LTR MaLR 1 361 -4 1656 167 29 36 chr20 11537203 11537509 -60616373 - AluJb SINE Alu -5 307 4 1336 242 74 18 chr20 11537516 11538010 -60615872 - L1MC4 LINE L1 -98 7710 7180 671 242 127 53 chr20 11538217 11538539 -60615343 - L1ME3A LINE L1 0 6170 5825 2882 146 12 5 chr20 11538607 11539032 -60614850 - MSTA LTR MaLR 0 428 1 2029 128 0 3 chr20 11539119 11539409 -60614473 - AluSx SINE Alu -22 290 2 376 322 61 28 chr20 11539455 11539635 -60614247 - MIR SINE MIR -28 234 49 667 312 149 14 chr20 11539762 11540111 -60613771 + LTR16C LTR ERVL 96 491 0 300 297 17 42 chr20 11540446 11540564 -60613318 + MIR SINE MIR 15 129 -133 2432 173 51 7 chr20 11540576 11541009 -60612873 - LTR32 LTR ERVL 0 471 20 250 299 0 10 chr20 11541021 11541118 -60612764 + MIR SINE MIR 131 226 -36 430 229 243 7 chr20 11541155 11541299 -60612583 + MIR SINE MIR 12 189 -73 2102 73 0 0 chr20 11542714 11543013 -60610869 - AluSc SINE Alu 0 332 34 300 165 66 104 chr20 11543043 11543160 -60610722 - MLT1I LTR MaLR 0 409 316 280 252 117 29 chr20 11543516 11543619 -60610263 + MIR SINE MIR 79 190 -72 4507 200 38 16 chr20 11544520 11546202 -60607680 + L1MB4 LINE L1 4458 6180 0 6393 87 17 8 chr20 11546206 11547094 -60606788 + L1PA10 LINE L1 5260 6156 -12 1346 243 84 6 chr20 11547101 11547527 -60606355 - MLT1H LTR MaLR -57 492 5 371 309 111 19 chr20 11547814 11547976 -60605906 - MIR3 SINE MIR -13 195 19 391 273 11 0 chr20 11548066 11548154 -60605728 + MER5A DNA MER1_type 9 97 -92 502 211 35 56 chr20 11548235 11548377 -60605505 - MER5B DNA MER1_type -4 174 36 2656 49 0 0 chr20 11548396 11548702 -60605180 - AluY SINE Alu -5 306 1 252 86 0 0 chr20 11549931 11549966 -60603916 + (TATATG)n Simple_repeat Simple_repeat 6 40 0 233 178 0 0 chr20 11549967 11550012 -60603870 - LTR66 LTR ERVL -172 438 394 239 258 0 0 chr20 11550012 11550074 -60603808 + (TA)n Simple_repeat Simple_repeat 2 63 0 3165 142 55 6 chr20 11550217 11550711 -60603171 - LTR44 LTR ERV1 0 519 2 674 224 160 0 chr20 11550720 11550876 -60603006 - MER5A DNA MER1_type 0 189 9 463 221 188 13 chr20 11550902 11551051 -60602831 - MER5B DNA MER1_type -3 175 1 351 65 0 0 chr20 11551204 11551250 -60602632 + (GA)n Simple_repeat Simple_repeat 1 46 0 358 44 0 0 chr20 11551364 11551409 -60602473 - L1P4 LINE L1 -564 5601 5557 954 82 54 7 chr20 11551410 11551614 -60602268 + L1PA8 LINE L1 5931 6162 0 1710 170 3 17 chr20 11551739 11552039 -60601843 - AluJo SINE Alu -16 296 1 327 321 0 0 chr20 11552471 11552577 -60601305 - L1ME3 LINE L1 -2 6160 6055 234 146 24 0 chr20 11552577 11552618 -60601264 - MER3 DNA MER1_type -160 49 8 237 242 0 16 chr20 11552618 11552680 -60601202 - L1ME3 LINE L1 -150 6012 5952 683 220 5 52 chr20 11552725 11552916 -60600966 - L1PB4 LINE L1 -25 6131 5950 455 282 84 23 chr20 11553764 11553993 -60599889 + MIR SINE MIR 19 260 -2 811 198 178 41 chr20 11554503 11554700 -60599182 - MER58A DNA MER1_type 0 224 1 361 183 14 0 chr20 11554708 11554779 -60599103 - Charlie5 DNA MER1_type -27 2585 2514 1357 167 101 40 chr20 11554787 11555063 -60598819 + AluJo SINE Alu 1 293 -19 1531 136 4 0 chr20 11555167 11555395 -60598487 + AluSq SINE Alu 81 309 -4 232 188 71 18 chr20 11557088 11557200 -60596682 + (TA)n Simple_repeat Simple_repeat 1 118 0 449 245 185 0 chr20 11557306 11557457 -60596425 + MER5A DNA MER1_type 11 189 0 254 234 19 37 chr20 11557462 11557569 -60596313 - L1ME4a LINE L1 -77 6044 5940 375 378 25 10 chr20 11557938 11558142 -60595740 - MIR SINE MIR -3 259 53 274 289 163 22 chr20 11559653 11559788 -60594094 + MIR3 SINE MIR 19 172 -36 2293 89 0 0 chr20 11560446 11560755 -60593127 + AluSg SINE Alu 1 309 0 6149 198 103 73 chr20 11561052 11562379 -60591503 + L1MC3 LINE L1 5782 7269 -516 268 298 0 12 chr20 11562379 11562463 -60591419 + MLT1F1 LTR MaLR 49 131 -436 6149 198 103 73 chr20 11562463 11562997 -60590885 + L1MC3 LINE L1 7269 7785 0 195 250 56 0 chr20 11563001 11563073 -60590809 + MER5C DNA MER1_type 235 310 -14 22 0 0 0 chr20 11563708 11563730 -60590152 + AT_rich Low_complexity Low_complexity 1 22 0 25 0 0 0 chr20 11566708 11566733 -60587149 + AT_rich Low_complexity Low_complexity 1 25 0 397 308 43 0 chr20 11566816 11566933 -60586949 - MIR SINE MIR -63 145 24 207 273 0 0 chr20 11567633 11567677 -60586205 + (TG)n Simple_repeat Simple_repeat 1 44 0 271 235 295 18 chr20 11568143 11568309 -60585573 - MIR SINE MIR -1 261 50 989 213 23 32 chr20 11568498 11568719 -60585163 - MER20 DNA MER1_type 0 219 1 666 289 68 5 chr20 11568749 11568939 -60584943 + MIR SINE MIR 12 213 -49 495 293 87 34 chr20 11569007 11569215 -60584667 - MIR SINE MIR -19 243 25 257 269 343 0 chr20 11569592 11569700 -60584182 + MIR SINE MIR 20 164 -98 934 189 30 0 chr20 11569702 11569866 -60584016 + FRAM SINE Alu 1 168 -8 687 328 9 4 chr20 11573225 11573454 -60580428 + MIR SINE MIR 33 262 0 369 273 110 16 chr20 11574844 11575050 -60578832 - MIR SINE MIR -1 261 38 182 250 104 0 chr20 11575017 11575065 -60578817 - MIR SINE MIR -133 129 77 * 1134 265 152 7 chr20 11575415 11575823 -60578059 + L2 LINE L2 1907 2373 -941 411 82 0 33 chr20 11575824 11575885 -60577997 - MLT1F LTR MaLR 0 542 484 1738 210 109 61 chr20 11575906 11576196 -60577686 - MLT1F LTR MaLR -13 529 254 201 39 0 0 chr20 11576196 11576222 -60577660 + (TTA)n Simple_repeat Simple_repeat 2 27 0 959 170 14 14 chr20 11576224 11576371 -60577511 - FRAM SINE Alu -19 147 1 1738 210 109 61 chr20 11576371 11576582 -60577300 - MLT1F LTR MaLR -288 254 1 1220 264 138 25 chr20 11576582 11577444 -60576438 + L2 LINE L2 2370 3313 0 709 218 128 11 chr20 11577477 11577656 -60576226 + MER3 DNA MER1_type 2 201 -8 219 274 0 0 chr20 11577774 11577825 -60576057 - L2 LINE L2 -5 3267 3217 523 255 176 14 chr20 11579340 11579556 -60574326 - MIR SINE MIR -11 251 1 352 259 140 97 chr20 11579684 11580035 -60573847 - L1ME4a LINE L1 -2 6119 5754 34 84 0 0 chr20 11580102 11580185 -60573697 + AT_rich Low_complexity Low_complexity 1 83 0 685 284 132 19 chr20 11580207 11580718 -60573164 - L1ME4a LINE L1 -293 5828 5255 352 318 85 79 chr20 11582708 11583037 -60570845 - L2 LINE L2 -9 3263 2933 377 316 200 0 chr20 11583037 11583192 -60570690 - MER5A DNA MER1_type 0 189 4 383 174 19 11 chr20 11584083 11584178 -60569704 + MER5A DNA MER1_type 35 131 -47 343 280 48 97 chr20 11584270 11584395 -60569487 - MIR SINE MIR -33 229 114 1990 149 0 7 chr20 11584395 11584683 -60569199 + AluJo SINE Alu 1 286 -26 343 280 48 97 chr20 11584683 11584743 -60569139 - MIR SINE MIR -148 114 53 1831 127 4 4 chr20 11585274 11585541 -60568341 - AluSx SINE Alu -9 303 37 263 295 116 0 chr20 11586093 11586205 -60567677 + MIR SINE MIR 50 174 -88 232 329 0 37 chr20 11586465 11586547 -60567335 - MIR SINE MIR -106 156 78 2030 129 0 14 chr20 11586642 11586937 -60566945 + AluSx SINE Alu 1 291 -21 343 70 0 0 chr20 11586942 11587049 -60566833 + Alu SINE Alu 241 347 0 759 285 93 40 chr20 11587813 11588283 -60565599 - LTR33 LTR ERVL -9 512 1 263 224 47 56 chr20 11588661 11588768 -60565114 - L1ME4a LINE L1 0 6121 6016 1009 229 130 80 chr20 11588910 11589433 -60564449 - MLT1H LTR MaLR 0 549 1 693 288 88 63 chr20 11589846 11590211 -60563671 - L2 LINE L2 -2 3311 2938 1292 245 160 17 chr20 11590437 11590937 -60562945 - MLT1G1 LTR MaLR -2 553 1 3051 174 82 35 chr20 11590966 11591645 -60562237 + L1MD2 LINE L1 5388 6098 -261 447 48 145 0 chr20 11591646 11591708 -60562174 + MADE1 DNA Mariner 2 72 -8 423 200 0 42 chr20 11591708 11591803 -60562079 + LTR16C LTR ERVL 274 364 -127 509 249 138 27 chr20 11591815 11592030 -60561852 + L1MD2 LINE L1 6108 6350 -9 1709 181 7 23 chr20 11592030 11592340 -60561542 + AluJo SINE Alu 1 305 -7 511 227 9 0 chr20 11592880 11592990 -60560892 + Charlie8 DNA MER1_type 86 196 -2221 325 303 25 33 chr20 11593031 11593153 -60560729 + LTR16C LTR ERVL 4 124 -367 722 224 7 0 chr20 11593175 11593327 -60560555 - MER5A DNA MER1_type -5 184 32 270 0 0 0 chr20 11594295 11594325 -60559557 + (CA)n Simple_repeat Simple_repeat 2 31 0 2826 124 51 24 chr20 11595001 11595454 -60558428 - MER4C LTR ERV1 0 465 1 872 10 0 0 chr20 11596577 11596675 -60557207 + L1PA3 LINE L1 6054 6151 -4 361 256 12 12 chr20 11596815 11596901 -60556981 - MER81 DNA DNA 0 114 29 394 158 0 13 chr20 11597219 11597295 -60556587 - MER5A DNA MER1_type -85 104 30 750 234 16 10 chr20 11597488 11597680 -60556202 + MIR SINE MIR 55 247 -15 1477 226 92 25 chr20 11597681 11598114 -60555768 - MLT1C LTR MaLR 0 467 6 202 286 29 43 chr20 11599045 11599115 -60554767 - L2 LINE L2 -4 3309 3241 410 276 86 12 chr20 11602576 11602739 -60551143 + MIR SINE MIR 18 192 -70 713 313 91 43 chr20 11602757 11602989 -60550893 - L2 LINE L2 -19 3294 3075 1748 174 52 33 chr20 11602989 11603357 -60550525 - THE1C LTR MaLR 0 375 1 713 313 91 43 chr20 11603357 11603613 -60550269 - L2 LINE L2 -238 3075 2787 2448 77 0 0 chr20 11604021 11604319 -60549563 + AluY SINE Alu 1 298 -13 1092 276 71 31 chr20 11604358 11604810 -60549072 + L1ME3 LINE L1 5658 6127 -35 718 159 44 0 chr20 11604817 11604930 -60548952 + FLAM_A SINE Alu 2 119 -14 207 139 0 0 chr20 11605952 11605988 -60547894 + (A)n Simple_repeat Simple_repeat 1 36 0 189 0 0 0 chr20 11607986 11608007 -60545875 + (TTAA)n Simple_repeat Simple_repeat 2 22 0 3624 83 6 4 chr20 11608007 11608479 -60545403 - L1PA7 LINE L1 -11 6143 5668 653 276 37 28 chr20 11609699 11609913 -60543969 - LTR16C LTR ERVL 0 491 276 1472 150 0 17 chr20 11610370 11610610 -60543272 - MER46A DNA MER2_type 0 236 1 239 240 0 0 chr20 11610627 11610677 -60543205 + (CA)n Simple_repeat Simple_repeat 2 51 0 352 250 19 48 chr20 11610689 11610793 -60543089 + L2 LINE L2 3201 3301 -12 1374 174 166 13 chr20 11610885 11611265 -60542617 - Charlie4a DNA MER1_type -24 484 47 2566 53 0 3 chr20 11611409 11611713 -60542169 - AluY SINE Alu -8 303 1 217 281 148 8 chr20 11611839 11611985 -60541897 - MIR SINE MIR -31 231 66 352 298 25 25 chr20 11612015 11612173 -60541709 - MER5A DNA MER1_type -24 165 8 2653 194 70 26 chr20 11615798 11616427 -60537455 + L1ME2 LINE L1 5474 6135 -29 3501 139 39 7 chr20 11616427 11616717 -60537165 - L1MA4A LINE L1 -5 6298 6019 324 48 0 0 chr20 11616717 11616759 -60537123 + (CA)n Simple_repeat Simple_repeat 2 43 0 3501 139 39 7 chr20 11616759 11617066 -60536816 - L1MA4A LINE L1 -284 6019 5682 2653 194 70 26 chr20 11617066 11617095 -60536787 + L1ME2 LINE L1 6135 6161 -3 494 136 34 11 chr20 11617096 11617184 -60536698 - L1ME3A LINE L1 -52 6118 6029 342 303 114 0 chr20 11617708 11617840 -60536042 - MIR SINE MIR -86 176 30 317 267 0 0 chr20 11617922 11617997 -60535885 + L1ME3A LINE L1 6045 6119 -51 * 486 233 116 0 chr20 11617995 11618142 -60535740 + L1MA10 LINE L1 6005 6327 -7 316 247 129 0 chr20 11618165 11618250 -60535632 - L1MC4 LINE L1 -1339 6703 6608 459 212 68 27 chr20 11618271 11618417 -60535465 + MER113 DNA MER1_type? 297 448 -73 26 0 0 0 chr20 11618774 11618800 -60535082 + AT_rich Low_complexity Low_complexity 1 26 0 21 0 0 0 chr20 11618857 11618878 -60535004 + AT_rich Low_complexity Low_complexity 1 21 0 417 270 147 0 chr20 11619551 11619714 -60534168 + MIR SINE MIR 49 235 -27 182 227 0 0 chr20 11619687 11619731 -60534151 + L2 LINE L2 3213 3256 -16 * 1134 245 46 23 chr20 11620125 11620431 -60533451 + MER46C DNA MER2_type 4 316 -22 204 67 0 0 chr20 11620431 11620461 -60533421 + (T)n Simple_repeat Simple_repeat 1 30 0 551 261 55 40 chr20 11620536 11620735 -60533147 + MER112 DNA MER1_type 1 202 -58 1474 179 181 33 chr20 11620745 11621175 -60532707 - Charlie4a DNA MER1_type -10 498 5 534 183 157 0 chr20 11621965 11622080 -60531802 + FLAM_A SINE Alu 1 133 0 459 277 88 0 chr20 11622310 11622447 -60531435 + LTR16C LTR ERVL 147 295 -196 190 228 35 0 chr20 11622992 11623049 -60530833 + MIR SINE MIR 89 147 -115 288 91 0 0 chr20 11623066 11623110 -60530772 + (TTTTG)n Simple_repeat Simple_repeat 3 46 0 2429 162 18 49 chr20 11623496 11623990 -60529892 + LTR55 LTR ERV 1 479 -69 295 180 101 22 chr20 11624015 11624104 -60529778 + MER5A DNA MER1_type 17 112 -77 327 96 0 0 chr20 11624442 11624494 -60529388 + (CA)n Simple_repeat Simple_repeat 2 53 0 346 303 7 26 chr20 11626488 11626640 -60527242 + GA-rich Low_complexity Low_complexity 3 151 0 1548 178 0 68 chr20 11627297 11627618 -60526264 + AluJo SINE Alu 1 299 -13 22 0 0 0 chr20 11629090 11629112 -60524770 + GC_rich Low_complexity Low_complexity 1 22 0 273 313 14 61 chr20 11631381 11631528 -60522354 - MIR SINE MIR -50 212 73 198 0 0 0 chr20 11632129 11632151 -60521731 + (TC)n Simple_repeat Simple_repeat 1 22 0 249 57 0 0 chr20 11635040 11635075 -60518807 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 2095 106 0 4 chr20 11635076 11635350 -60518532 - AluSg SINE Alu -36 274 2 286 259 129 0 chr20 11639178 11639263 -60514619 + MER5A DNA MER1_type 11 106 -83 309 240 78 39 chr20 11639419 11639548 -60514334 + MER5B DNA MER1_type 36 169 -9 380 253 0 0 chr20 11639740 11639827 -60514055 + MIR SINE MIR 99 185 -77 456 227 25 17 chr20 11640177 11640296 -60513586 - MER5A DNA MER1_type -66 123 4 1075 171 97 52 chr20 11640344 11640534 -60513348 - MER33 DNA MER1_type -2261 324 113 5395 134 28 29 chr20 11640534 11641457 -60512425 - MER49 LTR ERV1 -1 922 1 1075 171 97 52 chr20 11641457 11641576 -60512306 - MER33 DNA MER1_type -2472 113 1 1026 191 179 52 chr20 11641691 11642015 -60511867 - MLT1A1 LTR MaLR 0 365 1 325 259 129 62 chr20 11642353 11642546 -60511336 + MLT1K LTR MaLR 277 482 -106 2116 119 14 3 chr20 11642590 11642884 -60510998 + AluSg SINE Alu 1 297 -13 260 326 126 0 chr20 11643348 11643443 -60510439 + L2 LINE L2 3137 3243 -29 455 276 44 61 chr20 11643671 11643899 -60509983 + L2 LINE L2 2921 3144 -169 538 218 16 16 chr20 11643910 11644034 -60509848 - MER104 DNA Tc2 -4 176 53 973 219 11 0 chr20 11644479 11644666 -60509216 - MER5A DNA MER1_type 0 189 1 1320 284 98 50 chr20 11645118 11645855 -60508027 + L2 LINE L2 27 798 -2516 893 281 121 40 chr20 11645847 11646005 -60507877 + L2 LINE L2 1715 1859 -1455 * 1195 201 81 44 chr20 11646005 11646388 -60507494 + MLT2C1 LTR ERVL 1 397 0 893 281 121 40 chr20 11646388 11646590 -60507292 + L2 LINE L2 1859 2116 -1198 1931 148 3 35 chr20 11646590 11646908 -60506974 - AluJo SINE Alu -4 308 1 893 281 121 40 chr20 11646908 11646966 -60506916 + L2 LINE L2 2116 2168 -1146 1775 209 64 56 chr20 11646966 11647450 -60506432 - LTR42 LTR ERVL 0 495 8 268 225 195 117 chr20 11647458 11647608 -60506274 + L2 LINE L2 2164 2301 -1013 1312 208 56 31 chr20 11647608 11647896 -60505986 - AluJo SINE Alu -17 295 1 2241 172 25 15 chr20 11647897 11648305 -60505577 + MLT2D LTR ERVL 3 414 0 268 225 195 117 chr20 11648305 11648383 -60505499 + L2 LINE L2 2300 2412 -902 243 299 95 14 chr20 11648441 11648588 -60505294 + MLT1J LTR MaLR 348 506 -5 687 135 117 0 chr20 11648629 11648740 -60505142 - FRAM SINE Alu -25 151 28 1107 269 151 15 chr20 11648740 11649204 -60504678 + L2 LINE L2 2433 2959 -355 544 261 122 46 chr20 11649217 11649676 -60504206 - MLT1J LTR MaLR -5 506 13 758 250 77 57 chr20 11649765 11650303 -60503579 + MLT1H1 LTR MaLR 1 555 0 994 317 160 21 chr20 11650305 11650825 -60503057 - L2 LINE L2 -494 2820 2229 1018 259 76 15 chr20 11651772 11652169 -60501713 + LTR16C LTR ERVL 71 491 0 1299 258 21 6 chr20 11652590 11652919 -60500963 - MER58B DNA MER1_type -4 337 4 1338 122 0 39 chr20 11653180 11653408 -60500474 - AluSg/x SINE Alu 0 305 86 182 175 0 25 chr20 11653699 11653739 -60500143 + MIR SINE MIR 111 149 -113 372 94 0 0 chr20 11653839 11653892 -60499990 + (TG)n Simple_repeat Simple_repeat 1 53 0 1881 196 57 102 chr20 11653897 11654576 -60499306 + MLT1E1 LTR MaLR 6 654 0 378 304 103 11 chr20 11654836 11655020 -60498862 - L2 LINE L2 -1279 2035 1835 287 253 40 0 chr20 11655020 11655095 -60498787 + L1M4 LINE L1 4832 4909 -1237 2695 172 26 6 chr20 11655139 11656000 -60497882 + L1M4 LINE L1 4906 5784 -400 498 332 57 22 chr20 11656302 11656531 -60497351 - MIR SINE MIR -18 244 8 324 202 34 76 chr20 11657155 11657274 -60496608 - L1ME3 LINE L1 -3 6159 6046 1324 195 52 50 chr20 11657275 11657696 -60496186 - Charlie1 DNA MER1_type 0 2761 2340 403 236 78 59 chr20 11657808 11658046 -60495836 - L1ME3 LINE L1 -174 5988 5650 486 240 38 82 chr20 11658046 11658229 -60495653 - FAM SINE Alu 0 175 1 403 236 78 59 chr20 11658229 11658304 -60495578 - L1ME3 LINE L1 -512 5650 5578 335 125 0 16 chr20 11658762 11658826 -60495056 + (GGA)n Simple_repeat Simple_repeat 3 65 0 343 180 120 114 chr20 11659075 11659242 -60494640 - MLT1H LTR MaLR 0 549 382 1376 113 5 0 chr20 11659386 11659599 -60494283 - Tigger4(Zombi) DNA MER2_type 0 2731 2518 2312 114 7 0 chr20 11659708 11660015 -60493867 + AluSx SINE Alu 1 309 -3 1388 207 24 27 chr20 11660186 11660514 -60493368 + MER87 LTR ERV1 215 541 0 180 370 0 19 chr20 11662481 11662589 -60491293 - L2 LINE L2 -1034 2280 2175 693 217 5 33 chr20 11662836 11663020 -60490862 + MER104 DNA MER2_type 2 180 0 25 0 0 0 chr20 11663783 11663808 -60490074 + AT_rich Low_complexity Low_complexity 1 25 0 252 232 18 0 chr20 11664309 11664365 -60489517 - MIR3 SINE MIR -41 167 111 665 237 102 0 chr20 11666243 11666405 -60487477 + MER5A DNA MER1_type 4 184 -5 588 231 15 0 chr20 11667668 11667798 -60486084 - MER94 DNA DNA -2 132 1 270 0 0 0 chr20 11670351 11670381 -60483501 + (TTTTA)n Simple_repeat Simple_repeat 2 31 0 2263 78 7 7 chr20 11670827 11671121 -60482761 - AluSc SINE Alu -15 294 1 180 0 0 0 chr20 11671782 11671802 -60482080 + (A)n Simple_repeat Simple_repeat 1 20 0 685 227 43 6 chr20 11672680 11672843 -60481039 - MER5A DNA MER1_type -1 188 20 719 267 87 41 chr20 11673233 11673999 -60479883 - L1ME3 LINE L1 -561 5560 2890 249 91 0 23 chr20 11674217 11674261 -60479621 + L1MA4A LINE L1 6080 6122 -181 * 363 205 29 10 chr20 11674250 11674360 -60479522 + L1MA4A LINE L1 6044 6280 -2 2289 114 0 7 chr20 11674703 11675010 -60478872 - AluSx SINE Alu -7 305 1 566 258 150 0 chr20 11675335 11675575 -60478307 + LTR16A1 LTR ERVL 178 453 -4 2224 119 10 0 chr20 11675776 11676079 -60477803 + AluSx SINE Alu 1 306 -6 24 32 0 0 chr20 11676081 11676112 -60477770 + AT_rich Low_complexity Low_complexity 1 31 0 692 179 74 0 chr20 11676514 11676676 -60477206 + L1MB3 LINE L1 5991 6164 -19 190 0 32 32 chr20 11677601 11677632 -60476250 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 36369 83 8 9 chr20 11677632 11683767 -60470115 - L1PA6 LINE L1 -16 6138 11 647 142 108 42 chr20 11684945 11685065 -60468817 - FLAM_C SINE Alu -15 128 1 2323 115 0 0 chr20 11685683 11685995 -60467887 - AluSx SINE Alu 0 312 1 716 236 81 8 chr20 11686176 11686422 -60467460 + MLT1H LTR MaLR 35 298 -251 336 292 91 19 chr20 11686479 11686633 -60467249 + MLT1H LTR MaLR 384 548 -1 1903 149 4 4 chr20 11688921 11689196 -60464686 + AluSx SINE Alu 1 275 -37 21 36 0 0 chr20 11689606 11689634 -60464248 + AT_rich Low_complexity Low_complexity 1 28 0 2213 229 52 13 chr20 11690649 11691264 -60462618 + L1MC4a LINE L1 7170 7808 0 489 291 162 32 chr20 11691850 11692190 -60461692 - L3 LINE CR1 -50 1527 1144 300 194 117 29 chr20 11693182 11693285 -60460597 + MIR SINE MIR 90 201 -61 340 285 108 23 chr20 11693847 11693977 -60459905 + L2 LINE L2 3172 3312 -1 297 385 0 22 chr20 11693969 11694104 -60459778 + MIR3 SINE MIR 14 145 -63 * 2084 127 40 0 chr20 11694108 11694408 -60459474 + AluSx SINE Alu 1 312 0 235 235 259 0 chr20 11694707 11694788 -60459094 + MIR3 SINE MIR 82 183 -25 346 277 74 83 chr20 11695384 11695709 -60458173 + MER102b DNA MER1_type 9 330 -11 1290 141 35 22 chr20 11696323 11696550 -60457332 + MER30 DNA MER1_type 1 230 0 305 341 0 12 chr20 11697253 11697338 -60456544 + MIR SINE MIR 8 91 -171 1718 257 94 2 chr20 11697398 11697885 -60455997 + MLT1H LTR MaLR 18 549 0 192 40 0 0 chr20 11698133 11698158 -60455724 + (TTG)n Simple_repeat Simple_repeat 2 26 0 2181 119 0 7 chr20 11698165 11698460 -60455422 - AluSq SINE Alu -20 293 1 492 328 88 17 chr20 11698768 11699006 -60454876 + MIR SINE MIR 8 262 0 22 0 0 0 chr20 11699743 11699765 -60454117 + AT_rich Low_complexity Low_complexity 1 22 0 2179 126 3 0 chr20 11700280 11700574 -60453308 - AluSg SINE Alu -15 295 1 1369 232 74 25 chr20 11701264 11701695 -60452187 - LTR16A1 LTR ERVL -3 454 3 248 271 29 14 chr20 11702391 11702461 -60451421 + MIR3 SINE MIR 111 181 -27 668 195 5 88 chr20 11702731 11702946 -60450936 + MER3 DNA MER1_type 13 209 0 236 196 0 0 chr20 11702905 11702951 -60450931 - MER3 DNA MER1_type -121 88 43 * 980 252 53 13 chr20 11703316 11703634 -60450248 + LTR16C LTR ERVL 161 491 0 186 348 45 34 chr20 11703993 11704171 -60449711 + L2 LINE L2 725 904 -2410 937 208 5 10 chr20 11704303 11704505 -60449377 + MLT1H LTR MaLR 2 202 -347 1416 177 91 84 chr20 11704513 11704919 -60448963 + MER47B DNA MER2_type 10 418 0 556 286 163 14 chr20 11704928 11705211 -60448671 + MLT1H LTR MaLR 225 549 0 440 222 9 13 chr20 11705573 11705686 -60448196 + MLT1H LTR MaLR 15 170 -379 518 224 99 6 chr20 11705815 11705976 -60447906 + MLT1H LTR MaLR 374 549 0 2373 100 0 0 chr20 11706661 11706972 -60446910 - AluY SINE Alu 0 311 1 1710 196 0 19 chr20 11708403 11708715 -60445167 + AluJo SINE Alu 1 306 -6 1545 144 107 3 chr20 11708786 11709112 -60444770 - MER46B DNA MER2_type 0 236 2 383 295 87 15 chr20 11709754 11709948 -60443934 + MIR SINE MIR 17 219 -43 21 0 0 0 chr20 11710073 11710094 -60443788 + AT_rich Low_complexity Low_complexity 1 21 0 2186 129 0 0 chr20 11710381 11710691 -60443191 + AluSx SINE Alu 1 310 -2 639 244 100 25 chr20 11710843 11711203 -60442679 - L1ME4a LINE L1 -282 5839 5511 664 284 75 53 chr20 11711308 11711776 -60442106 - L1MC5 LINE L1 -7 7954 7477 2076 144 13 0 chr20 11713247 11713373 -60440509 + AluSx SINE Alu 1 124 -188 408 20 0 0 chr20 11713373 11713422 -60440460 + (CA)n Simple_repeat Simple_repeat 2 50 0 2076 144 13 0 chr20 11713422 11713594 -60440288 + AluSx SINE Alu 124 303 -9 1371 221 94 21 chr20 11713620 11714046 -60439836 + MLT1C LTR MaLR 6 462 -5 1451 104 8 58 chr20 11714839 11714972 -60438910 - MER30 DNA MER1_type -1 229 112 207 0 0 0 chr20 11714972 11714995 -60438887 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1451 104 8 58 chr20 11714995 11715101 -60438781 - MER30 DNA MER1_type -118 112 2 325 259 153 0 chr20 11716546 11716677 -60437205 - MER103 DNA DNA -9 157 7 2007 144 0 0 chr20 11717809 11718114 -60435768 - AluSx SINE Alu -7 305 1 22 0 0 0 chr20 11718269 11718291 -60435591 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr20 11718350 11718373 -60435509 + AT_rich Low_complexity Low_complexity 1 23 0 2199 129 6 0 chr20 11718380 11718691 -60435191 + AluSq SINE Alu 1 313 0 516 237 37 56 chr20 11720263 11720478 -60433404 - MIR SINE MIR -29 233 23 261 271 35 24 chr20 11720858 11720943 -60432939 - MIR3 SINE MIR -4 204 119 240 293 71 20 chr20 11724045 11724144 -60429738 + MIR3 SINE MIR 104 207 -1 747 253 34 51 chr20 11724372 11724428 -60429454 - L1ME1 LINE L1 -5 6161 6106 2040 125 30 0 chr20 11724428 11724725 -60429157 + AluSx SINE Alu 1 306 -6 747 253 34 51 chr20 11724725 11724964 -60428918 - L1ME1 LINE L1 -60 6106 5871 1014 189 69 36 chr20 11725513 11725873 -60428009 - Charlie4a DNA MER1_type -81 427 56 4055 205 59 10 chr20 11725873 11726681 -60427201 + L1MB7 LINE L1 4130 4897 -1287 186 43 0 0 chr20 11726681 11726704 -60427178 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 4055 205 59 10 chr20 11726704 11727736 -60426146 + L1MB7 LINE L1 4897 6065 -119 24 0 0 0 chr20 11727829 11727853 -60426029 + AT_rich Low_complexity Low_complexity 1 24 0 721 226 101 0 chr20 11729200 11729359 -60424523 + MER45A DNA AcHobo 1 175 -3 315 253 0 0 chr20 11729585 11729668 -60424214 - HsTC2 DNA Tc2 -3 1895 1813 375 218 13 0 chr20 11729693 11729771 -60424111 + Tigger7 DNA MER2_type 1 79 -2408 23 78 0 0 chr20 11729779 11729830 -60424052 + AT_rich Low_complexity Low_complexity 1 51 0 1126 133 86 26 chr20 11729915 11730148 -60423734 + Tigger7 DNA MER2_type 2341 2587 0 1596 196 31 0 chr20 11731005 11731291 -60422591 + AluJb SINE Alu 1 295 -17 2458 63 0 10 chr20 11731379 11731682 -60422200 - AluY SINE Alu -11 300 1 258 136 0 0 chr20 11731682 11731726 -60422156 - Alu SINE Alu -258 44 1 1065 248 151 17 chr20 11732115 11732526 -60421356 - MER31B LTR ERV1 0 466 1 239 318 34 59 chr20 11732572 11732737 -60421145 - MIR SINE MIR -56 152 18 1840 119 83 4 chr20 11737411 11737688 -60416194 + AluSg SINE Alu 1 299 -11 186 211 211 0 chr20 11737701 11737758 -60416124 - MIR SINE MIR -80 182 114 765 207 40 29 chr20 11737769 11737943 -60415939 - MER5A DNA MER1_type -1 188 13 2272 76 3 26 chr20 11738263 11738565 -60415317 + AluY SINE Alu 2 296 -15 22 0 0 0 chr20 11739982 11740004 -60413878 + AT_rich Low_complexity Low_complexity 1 22 0 785 187 239 28 chr20 11740081 11740400 -60413482 + MLT1A1 LTR MaLR 1 365 0 1360 111 0 0 chr20 11740431 11740611 -60413271 - AluSg/x SINE Alu -9 303 124 991 280 143 16 chr20 11740719 11741208 -60412674 + L2 LINE L2 1419 1969 -1345 2012 139 47 28 chr20 11741208 11741595 -60412287 + MER57A LTR ERV1 1 394 -9 292 251 235 25 chr20 11741605 11741848 -60412034 + L2 LINE L2 1974 2267 -1047 237 279 0 0 chr20 11741857 11741918 -60411964 + (ATG)n Simple_repeat Simple_repeat 2 62 0 782 238 17 17 chr20 11741946 11742118 -60411764 - MIR SINE MIR -26 236 65 1081 287 111 22 chr20 11742145 11742695 -60411187 + L2 LINE L2 2302 2900 -414 213 310 14 111 chr20 11742814 11743030 -60410852 + L2 LINE L2 3115 3309 -4 355 269 58 6 chr20 11744637 11744793 -60409089 + MER104 DNA Tc2 5 168 -12 180 0 0 0 chr20 11744944 11744964 -60408918 + (CAA)n Simple_repeat Simple_repeat 2 21 0 339 281 26 26 chr20 11745006 11745120 -60408762 - MIR3 SINE MIR -24 184 71 224 71 48 0 chr20 11745224 11745266 -60408616 + (TTTAA)n Simple_repeat Simple_repeat 2 45 0 403 326 23 8 chr20 11746134 11746266 -60407616 + MIR SINE MIR 33 166 -96 633 53 0 0 chr20 11746266 11746367 -60407515 + AluY SINE Alu 209 309 0 883 237 128 60 chr20 11746719 11747267 -60406615 + MLT1G1 LTR MaLR 4 588 -7 5287 138 58 10 chr20 11747521 11748400 -60405482 + Tigger1 DNA MER2_type 1498 2418 0 1827 132 3 43 chr20 11749072 11749375 -60404507 - AluJo SINE Alu -21 291 1 427 350 116 12 chr20 11750115 11750461 -60403421 + L1MC/D LINE L1 5412 5793 -2015 202 260 14 27 chr20 11750616 11750689 -60403193 + (TATATG)n Simple_repeat Simple_repeat 6 77 0 268 286 13 0 chr20 11752098 11752175 -60401707 + (TCCA)n Simple_repeat Simple_repeat 4 81 0 2674 76 3 80 chr20 11752484 11752895 -60400987 + MER51B LTR ERV1 7 375 -2 720 258 77 13 chr20 11753018 11753431 -60400451 - LTR16C LTR ERVL -2 489 4 572 280 42 6 chr20 11753998 11754166 -60399716 + MER5B DNA MER1_type 5 178 0 1955 131 25 0 chr20 11756337 11756619 -60397263 - AluSx SINE Alu -22 290 2 181 344 0 16 chr20 11756620 11756684 -60397198 + MER5B DNA MER1_type 116 178 0 2160 120 3 0 chr20 11756808 11757100 -60396782 - AluSp SINE Alu -20 293 1 1717 105 8 27 chr20 11757906 11758164 -60395718 + AluSq SINE Alu 47 299 -14 1251 47 0 0 chr20 11758224 11758410 -60395472 + L1PA4 LINE L1 5982 6167 0 23 68 0 0 chr20 11758554 11758598 -60395284 + AT_rich Low_complexity Low_complexity 1 44 0 8514 93 15 97 chr20 11758768 11760261 -60393621 + SVA Other Other 17 1386 0 314 100 0 0 chr20 11760288 11760328 -60393554 + tRNA-Ile-ATT tRNA tRNA 1 40 -37 195 279 82 68 chr20 11761114 11761261 -60392621 + MIR3 SINE MIR 25 173 -35 309 272 18 18 chr20 11762001 11762115 -60391767 - L1ME LINE L1 -329 5841 5728 1592 298 147 17 chr20 11762176 11763208 -60390674 - L2 LINE L2 -43 3270 2096 600 291 48 5 chr20 11763211 11763417 -60390465 - L1ME LINE L1 -504 5658 5444 256 300 100 8 chr20 11763553 11763673 -60390209 + L2 LINE L2 3182 3312 -1 218 246 41 0 chr20 11763709 11763785 -60390097 - MIR SINE MIR -57 151 68 180 77 0 0 chr20 11765834 11765860 -60388022 + (TG)n Simple_repeat Simple_repeat 2 27 0 27 29 0 0 chr20 11766773 11766807 -60387075 + AT_rich Low_complexity Low_complexity 1 34 0 771 204 22 50 chr20 11766996 11767177 -60386705 + MER5A DNA MER1_type 13 188 -1 23 0 0 0 chr20 11767960 11767983 -60385899 + AT_rich Low_complexity Low_complexity 1 23 0 705 201 157 0 chr20 11768731 11768890 -60384992 - MER5A DNA MER1_type -2 187 4 343 331 49 20 chr20 11769144 11769389 -60384493 - L1ME LINE L1 -1752 4394 4143 202 244 0 51 chr20 11770579 11770657 -60383225 + A-rich Low_complexity Low_complexity 5 78 0 198 0 0 0 chr20 11772177 11772199 -60381683 + (CAA)n Simple_repeat Simple_repeat 2 23 0 22 35 0 0 chr20 11773259 11773288 -60380594 + AT_rich Low_complexity Low_complexity 1 29 0 292 169 42 0 chr20 11773550 11773621 -60380261 + GA-rich Low_complexity Low_complexity 3 76 0 2363 101 0 3 chr20 11774124 11774431 -60379451 - AluSx SINE Alu -6 306 1 182 314 0 0 chr20 11776125 11776176 -60377706 + L2 LINE L2 3217 3267 -5 2208 90 6 32 chr20 11778638 11778949 -60374933 - AluY SINE Alu -8 303 1 1033 173 5 16 chr20 11779740 11779931 -60373951 + MER53 DNA DNA 1 189 0 710 256 118 44 chr20 11780407 11780728 -60373154 - LTR16A1 LTR ERVL -91 366 22 183 143 95 0 chr20 11781045 11781087 -60372795 - MIR SINE MIR -123 139 94 780 201 168 6 chr20 11783088 11783267 -60370615 - MER3 DNA MER1_type -1 208 1 3027 141 82 68 chr20 11783387 11784083 -60369799 - L1MB3 LINE L1 -3 6180 5475 196 236 181 0 chr20 11784867 11784939 -60368943 - MIR SINE MIR -59 149 65 1963 139 3 16 chr20 11786135 11786444 -60367438 - AluSx SINE Alu -7 305 1 716 240 76 0 chr20 11786790 11786961 -60366921 + MER5A DNA MER1_type 6 189 0 620 217 184 13 chr20 11786977 11787129 -60366753 + MER5A DNA MER1_type 9 186 -3 1874 174 36 9 chr20 11787219 11787552 -60366330 - MLT1A1 LTR MaLR -23 342 1 1782 179 3 6 chr20 11787911 11788223 -60365659 - AluJb SINE Alu -1 311 1 7926 37 5 2 chr20 11788736 11789758 -60364124 + L1PA3 LINE L1 5127 6150 -5 30 0 0 0 chr20 11789764 11789794 -60364088 + AT_rich Low_complexity Low_complexity 1 30 0 443 222 67 89 chr20 11789950 11790130 -60363752 - MER5B DNA MER1_type -2 176 1 410 242 194 8 chr20 11790165 11790289 -60363593 - MER5A DNA MER1_type -2 187 41 763 218 18 6 chr20 11790434 11790599 -60363283 + MER5A DNA MER1_type 1 167 -22 21 36 0 0 chr20 11790697 11790725 -60363157 + AT_rich Low_complexity Low_complexity 1 28 0 763 82 0 0 chr20 11793766 11793864 -60360018 + L1PA4 LINE L1 6051 6148 -7 2067 139 3 3 chr20 11794199 11794509 -60359373 + AluSx SINE Alu 1 310 -2 830 214 83 61 chr20 11794524 11794753 -60359129 + MIR SINE MIR 2 235 -27 816 271 9 19 chr20 11794800 11795014 -60358868 - MER58C DNA MER1_type -1 214 3 1138 168 10 5 chr20 11795731 11795933 -60357949 + L1MB5 LINE L1 5972 6174 0 213 121 0 0 chr20 11795970 11796003 -60357879 + (TTTTC)n Simple_repeat Simple_repeat 3 35 0 216 0 0 0 chr20 11796400 11796424 -60357458 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 2304 106 7 0 chr20 11797058 11797361 -60356521 - AluSc SINE Alu -4 305 1 226 330 21 32 chr20 11797385 11797479 -60356403 - MIR3 SINE MIR -29 179 87 469 267 107 40 chr20 11797657 11797882 -60356000 + Charlie8 DNA MER1_type 37 276 -2141 570 196 181 0 chr20 11798754 11798892 -60354990 - MER5A DNA MER1_type 0 189 27 186 200 0 60 chr20 11798932 11798982 -60354900 - MER5A DNA MER1_type -121 68 22 1169 142 6 0 chr20 11799853 11800029 -60353853 - AluSq SINE Alu -16 297 121 970 279 124 35 chr20 11800542 11801343 -60352539 - L2 LINE L2 -12 3301 2345 23 0 0 0 chr20 11803069 11803092 -60350790 + AT_rich Low_complexity Low_complexity 1 23 0 362 132 0 0 chr20 11803334 11803387 -60350495 + Tigger2 DNA MER2_type 13 65 -2653 2397 130 55 2 chr20 11803390 11803805 -60350077 + Tigger2 DNA MER2_type 2280 2716 -2 506 231 148 24 chr20 11803959 11804128 -60349754 + MIR3 SINE MIR 4 193 -15 852 241 26 22 chr20 11804143 11804375 -60349507 - MIR SINE MIR -2 260 28 395 234 171 19 chr20 11804600 11804758 -60349124 - MER5A DNA MER1_type 0 189 8 1383 175 64 3 chr20 11805317 11805614 -60348268 + MER33 DNA MER1_type 10 324 0 622 237 160 0 chr20 11805630 11805786 -60348096 + MER5A DNA MER1_type 9 189 0 1545 169 29 4 chr20 11806382 11806654 -60347228 - AluJb SINE Alu -33 279 1 210 118 0 0 chr20 11807244 11807278 -60346604 + (TA)n Simple_repeat Simple_repeat 2 35 0 313 342 140 37 chr20 11807508 11807751 -60346131 + L2 LINE L2 3005 3272 0 186 118 0 0 chr20 11808291 11808325 -60345557 + (T)n Simple_repeat Simple_repeat 1 34 0 843 242 0 0 chr20 11808426 11808604 -60345278 + MER5A DNA MER1_type 12 189 0 277 359 78 30 chr20 11809284 11809451 -60344431 + MIR SINE MIR 45 219 -43 248 257 0 0 chr20 11809524 11809594 -60344288 + MER116 DNA Mariner 9 78 -2 528 329 156 30 chr20 11810101 11810600 -60343282 + L2 LINE L2 721 1282 -2032 1593 297 190 17 chr20 11810610 11811746 -60342136 + L2 LINE L2 1725 3056 -257 284 277 10 50 chr20 11811747 11811848 -60342034 + L2 LINE L2 3167 3263 -50 25 65 0 0 chr20 11811870 11811916 -60341966 + AT_rich Low_complexity Low_complexity 1 46 0 261 329 35 0 chr20 11812046 11812131 -60341751 + MER91A DNA MER1_type 109 196 0 360 305 100 46 chr20 11813896 11814135 -60339747 + MIR SINE MIR 10 261 -1 257 335 92 38 chr20 11814163 11814234 -60339648 - MIR SINE MIR -44 218 152 696 204 105 11 chr20 11814234 11814425 -60339457 + MER3 DNA MER1_type 1 209 0 257 335 92 38 chr20 11814425 11814538 -60339344 - MIR SINE MIR -110 152 24 536 197 14 84 chr20 11815588 11815685 -60338197 - MIR SINE MIR -21 241 156 2140 202 38 64 chr20 11815685 11816313 -60337569 + LTR9 LTR ERV1 1 612 0 536 197 14 84 chr20 11816313 11816357 -60337525 - MIR SINE MIR -106 156 110 2299 101 0 0 chr20 11817255 11817562 -60336320 - AluY SINE Alu -4 307 1 1505 139 15 133 chr20 11817570 11817900 -60335982 - AluJo SINE Alu -11 291 1 216 339 57 16 chr20 11817967 11818091 -60335791 - MIR SINE MIR -75 187 59 32 0 0 0 chr20 11818824 11818856 -60335026 + AT_rich Low_complexity Low_complexity 1 32 0 1553 155 100 35 chr20 11818880 11819221 -60334661 + MLT1A1 LTR MaLR 3 365 0 210 37 0 0 chr20 11820602 11820629 -60333253 + (TTG)n Simple_repeat Simple_repeat 1 27 0 1517 94 0 0 chr20 11820633 11820825 -60333057 - AluSc SINE Alu -31 278 87 1070 122 0 43 chr20 11820849 11821013 -60332869 - FRAM SINE Alu 0 176 20 443 280 70 21 chr20 11821013 11821299 -60332583 - LTR16B LTR ERVL -34 430 131 732 251 215 14 chr20 11821611 11822067 -60331815 - L2 LINE L2 -62 3251 2684 422 294 49 54 chr20 11822061 11822245 -60331637 - MIR SINE MIR -70 192 10 * 2011 140 3 37 chr20 11822798 11823119 -60330763 + AluJo SINE Alu 1 310 -2 2093 118 0 29 chr20 11823123 11823438 -60330444 + AluSc SINE Alu 1 306 -3 215 302 132 44 chr20 11823760 11823942 -60329940 + MIR SINE MIR 52 249 -13 1049 138 39 17 chr20 11824104 11824285 -60329597 - MER5A DNA MER1_type -4 185 1 343 282 25 22 chr20 11824312 11824447 -60329435 + MIR SINE MIR 62 199 -62 3846 129 6 8 chr20 11824452 11825079 -60328803 + MER41B LTR ERV1 3 628 -7 2609 172 54 16 chr20 11825171 11825672 -60328210 + MLT2B1 LTR ERVL 1 520 0 2105 176 143 34 chr20 11826282 11826877 -60327005 + LTR8A LTR ERV1 1 660 -67 1038 162 11 37 chr20 11826877 11827068 -60326814 - AluJb SINE Alu -5 307 122 1286 117 0 0 chr20 11827069 11827240 -60326642 - AluSq SINE Alu -142 171 1 389 153 14 0 chr20 11827240 11827312 -60326570 + LTR8A LTR ERV1 655 727 0 661 221 0 21 chr20 11827932 11828072 -60325810 + MER58B DNA MER1_type 202 338 -3 383 243 139 40 chr20 11828560 11828733 -60325149 + L2 LINE L2 2632 2821 -493 * 818 222 11 22 chr20 11828728 11828913 -60324969 - MER5A DNA MER1_type -6 183 1 752 287 45 80 chr20 11828915 11829097 -60324785 + L2 LINE L2 2804 2991 -322 2132 120 0 32 chr20 11829097 11829406 -60324476 - AluSx SINE Alu -13 299 1 752 287 45 80 chr20 11829406 11829711 -60324171 + L2 LINE L2 2991 3274 -39 1525 104 0 0 chr20 11829991 11830184 -60323698 + AluSp SINE Alu 107 299 -14 836 243 34 80 chr20 11831940 11832418 -60321464 + LTR37B LTR ERV1 11 466 -2 483 48 0 0 chr20 11832641 11832703 -60321179 + (TG)n Simple_repeat Simple_repeat 2 63 0 754 212 63 5 chr20 11833034 11833223 -60320659 - MER3 DNA MER1_type 0 209 10 1941 164 0 6 chr20 11834317 11834628 -60319254 - AluY SINE Alu -2 309 1 461 369 53 36 chr20 11835479 11836012 -60317870 - L2 LINE L2 -43 3229 2688 240 197 33 16 chr20 11836056 11836117 -60317765 + L1ME4a LINE L1 5965 6026 -95 519 240 16 8 chr20 11836861 11836982 -60316900 + MIR SINE MIR 128 249 -13 23 0 0 0 chr20 11837097 11837120 -60316762 + AT_rich Low_complexity Low_complexity 1 23 0 477 0 0 0 chr20 11837509 11837562 -60316320 + (TG)n Simple_repeat Simple_repeat 2 54 0 1642 186 55 6 chr20 11837846 11838173 -60315709 + MER61A LTR ERV1 1 343 0 1887 120 0 39 chr20 11838642 11838925 -60314957 + AluSx SINE Alu 2 273 -39 493 350 67 30 chr20 11838966 11839295 -60314587 + HAL1 LINE L1 1257 1597 -910 21 0 0 0 chr20 11839523 11839544 -60314338 + AT_rich Low_complexity Low_complexity 1 21 0 1218 39 13 0 chr20 11840011 11840166 -60313716 + L1PA4 LINE L1 5997 6153 -2 22 35 0 0 chr20 11840174 11840203 -60313679 + AT_rich Low_complexity Low_complexity 1 29 0 2917 136 3 46 chr20 11841249 11841814 -60312068 + L1MA7 LINE L1 5550 6090 -201 24 32 0 0 chr20 11842171 11842202 -60311680 + AT_rich Low_complexity Low_complexity 1 31 0 1341 219 146 32 chr20 11843762 11844200 -60309682 + MLT1D LTR MaLR 1 488 -17 321 303 145 0 chr20 11845189 11845423 -60308459 + L1ME4a LINE L1 5574 5841 -280 264 212 95 83 chr20 11845489 11845753 -60308129 + L1ME4a LINE L1 5853 6119 -2 21 71 0 0 chr20 11846300 11846342 -60307540 + AT_rich Low_complexity Low_complexity 1 42 0 1363 208 39 12 chr20 11846612 11846949 -60306933 - MER39 LTR ERV1 -5 702 357 469 220 90 14 chr20 11846917 11847081 -60306801 - MER39 LTR ERV1 -359 183 6 * 1696 92 4 8 chr20 11847529 11847769 -60306113 - L1PB1 LINE L1 -1 6150 5912 7592 27 0 0 chr20 11848036 11849176 -60304706 - L1PA4 LINE L1 -1 6154 5015 2283 38 0 0 chr20 11849176 11849466 -60304416 + L1PA4 LINE L1 4694 4983 -1163 757 201 65 0 chr20 11850200 11850369 -60303513 + MER5A DNA MER1_type 4 183 -6 186 360 116 12 chr20 11851311 11851397 -60302485 + L2 LINE L2 3126 3220 -52 279 0 0 0 chr20 11851403 11851434 -60302448 + (TGAA)n Simple_repeat Simple_repeat 3 33 0 318 50 0 0 chr20 11851527 11851567 -60302315 + (TTCC)n Simple_repeat Simple_repeat 4 43 0 314 167 0 0 chr20 11851576 11851630 -60302252 - Alu SINE Alu -9 291 238 411 73 0 0 chr20 11851632 11851687 -60302195 + (TTCCC)n Simple_repeat Simple_repeat 2 56 0 229 139 0 0 chr20 11851723 11851759 -60302123 - Alu SINE Alu -27 274 239 466 161 40 27 chr20 11851762 11851911 -60301971 + CT-rich Low_complexity Low_complexity 4 154 0 213 65 0 0 chr20 11851914 11851945 -60301937 + (TCTCTG)n Simple_repeat Simple_repeat 4 34 0 2011 140 20 0 chr20 11851960 11852260 -60301622 - AluSx SINE Alu -6 306 1 527 244 15 15 chr20 11854001 11854132 -60299750 + MIR3 SINE MIR 12 142 -66 264 331 172 38 chr20 11856565 11856961 -60296921 + L3 LINE CR1 765 1213 -364 216 336 80 7 chr20 11856947 11857084 -60296798 - MIR3 SINE MIR -32 176 30 * 1072 292 91 19 chr20 11860560 11861088 -60292794 + L2 LINE L2 2749 3313 0 284 350 150 31 chr20 11861282 11861508 -60292374 - L2 LINE L2 -20 3252 3000 468 266 127 76 chr20 11861967 11862242 -60291640 + MLT1H LTR MaLR 39 327 -222 238 204 0 0 chr20 11862366 11862410 -60291472 + MLT1H LTR MaLR 506 549 0 21 0 0 0 chr20 11863593 11863614 -60290268 + AT_rich Low_complexity Low_complexity 1 21 0 528 358 17 0 chr20 11863768 11863944 -60289938 - MIR SINE MIR -72 190 12 330 317 17 17 chr20 11865045 11865225 -60288657 + L1ME4a LINE L1 5719 5898 -223 233 264 253 22 chr20 11866099 11866190 -60287692 + L2 LINE L2 3201 3312 -1 257 242 253 0 chr20 11867992 11868091 -60285791 - MER5A DNA MER1_type 0 189 66 813 182 34 0 chr20 11868093 11868241 -60285641 - FRAM SINE Alu -3 173 21 256 207 0 0 chr20 11868241 11868304 -60285578 - MER5A DNA MER1_type -124 65 3 753 233 93 48 chr20 11868668 11868981 -60284901 + MLT1J1 LTR MaLR 109 435 -11 373 348 76 31 chr20 11869082 11869306 -60284576 + MIR SINE MIR 15 248 -14 222 218 0 0 chr20 11869321 11869375 -60284507 - MER5A DNA MER1_type -133 56 3 220 305 24 37 chr20 11869481 11869563 -60284319 + MIR SINE MIR 19 99 -109 2609 88 11 0 chr20 11869628 11869979 -60283903 + THE1A LTR MaLR 1 355 0 492 309 71 54 chr20 11870959 11871309 -60282573 + L2 LINE L2 2465 2820 -494 399 21 0 0 chr20 11871333 11871381 -60282501 + (CA)n Simple_repeat Simple_repeat 2 49 0 316 280 45 8 chr20 11871439 11871571 -60282311 + L2 LINE L2 2966 3102 -170 891 253 30 17 chr20 11871585 11871818 -60282064 + MIR SINE MIR 19 254 -8 1663 169 6 47 chr20 11872843 11873162 -60280720 - AluJo SINE Alu -6 306 1 450 304 135 14 chr20 11873553 11873760 -60280122 + MIR SINE MIR 9 240 -22 1051 261 72 14 chr20 11874507 11874856 -60279026 + L1ME1 LINE L1 5776 6144 -22 317 202 24 24 chr20 11875314 11875398 -60278484 + LTR33A LTR ERVL 440 523 0 278 269 35 78 chr20 11875604 11875745 -60278137 - MLT1K LTR MaLR -250 338 204 243 355 153 49 chr20 11876404 11876795 -60277087 + MLT1K LTR MaLR 38 469 -119 1692 144 70 104 chr20 11876913 11877356 -60276526 - MSTC LTR MaLR 0 428 1 28 29 0 0 chr20 11877541 11877576 -60276306 + AT_rich Low_complexity Low_complexity 1 35 0 384 260 169 7 chr20 11878702 11878751 -60275131 - MER5A DNA MER1_type 0 189 149 266 68 45 0 chr20 11878751 11878795 -60275087 + (CAAA)n Simple_repeat Simple_repeat 2 47 0 384 260 169 7 chr20 11878795 11878899 -60274983 - MER5A DNA MER1_type -40 149 11 717 220 81 0 chr20 11879080 11879253 -60274629 - MER5A DNA MER1_type -2 187 1 297 301 39 39 chr20 11879323 11879479 -60274403 - MIR3 SINE MIR -2 206 51 2124 140 0 0 chr20 11879546 11879854 -60274028 - AluSx SINE Alu -2 310 3 246 331 14 47 chr20 11879973 11880121 -60273761 + MER5A DNA MER1_type 5 147 -42 754 205 12 29 chr20 11880171 11880342 -60273540 + MER5B DNA MER1_type 8 175 -3 548 179 0 0 chr20 11881540 11881642 -60272240 - MER5A DNA MER1_type -84 105 4 279 122 0 0 chr20 11882709 11882758 -60271124 + (CTCA)n Simple_repeat Simple_repeat 4 52 0 287 307 0 9 chr20 11884396 11884510 -60269372 + (TA)n Simple_repeat Simple_repeat 2 114 0 1237 197 42 16 chr20 11885062 11885372 -60268510 - MER33 DNA MER1_type -5 319 2 320 319 42 42 chr20 11885554 11885698 -60268184 - HAL1b LINE L1 -449 899 756 370 296 22 7 chr20 11886177 11886312 -60267570 - HAL1 LINE L1 -851 1656 1520 2359 96 0 0 chr20 11886320 11886622 -60267260 - AluSg SINE Alu -8 302 1 333 324 41 12 chr20 11886938 11887182 -60266700 - HAL1 LINE L1 -1239 1268 1018 23 0 0 0 chr20 11887193 11887216 -60266666 + AT_rich Low_complexity Low_complexity 1 23 0 420 281 78 97 chr20 11888534 11888865 -60265017 + MLT1L LTR MaLR 111 542 -73 1198 208 9 0 chr20 11889174 11889390 -60264492 + MER58A DNA MER1_type 6 223 -1 497 261 30 0 chr20 11889390 11889524 -60264358 - MER46C DNA MER2_type -142 196 59 2059 141 0 10 chr20 11890338 11890644 -60263238 - AluSx SINE Alu -9 303 1 550 272 6 50 chr20 11891952 11891974 -60261908 - MER5B DNA MER1_type -1 177 156 2364 194 60 22 chr20 11891974 11892475 -60261407 - MLT2B1 LTR ERVL 0 520 1 550 272 6 50 chr20 11892475 11892632 -60261250 - MER5B DNA MER1_type -22 156 6 519 224 0 0 chr20 11892684 11892782 -60261100 - MER5A DNA MER1_type -83 106 9 434 226 113 0 chr20 11892792 11892907 -60260975 + MER3 DNA MER1_type 42 122 -87 1406 191 61 21 chr20 11892913 11893291 -60260591 + MER3 DNA MER1_type 2232 2624 0 283 286 64 22 chr20 11893453 11893652 -60260230 + MLT1L LTR MaLR 309 568 -47 440 286 173 0 chr20 11893664 11893797 -60260085 - MER5A DNA MER1_type -22 167 12 248 247 43 32 chr20 11894017 11894110 -60259772 + MER103 DNA DNA 2 95 -71 314 346 55 45 chr20 11894300 11894502 -60259380 + MIR SINE MIR 23 226 -36 191 350 140 13 chr20 11895132 11895289 -60258593 - L2 LINE L2 0 3313 3137 1544 207 59 77 chr20 11895339 11895452 -60258430 + MLT1D LTR MaLR 1 114 -391 1713 148 39 28 chr20 11895452 11895736 -60258146 + AluJo SINE Alu 1 287 -25 791 41 0 0 chr20 11895736 11895833 -60258049 + L1PA4 LINE L1 6056 6152 -3 1544 207 59 77 chr20 11895833 11896270 -60257612 + MLT1D LTR MaLR 112 505 0 198 191 0 0 chr20 11896853 11896895 -60256987 + (TA)n Simple_repeat Simple_repeat 1 42 0 23 86 0 0 chr20 11897112 11897170 -60256712 + AT_rich Low_complexity Low_complexity 1 58 0 1439 248 70 4 chr20 11897770 11898241 -60255641 + Charlie4a DNA MER1_type 5 506 -2 328 45 0 0 chr20 11898706 11898750 -60255132 - MADE1 DNA Mariner 0 80 37 299 170 19 0 chr20 11899004 11899057 -60254825 + MLT1H LTR MaLR 5 58 -491 329 191 0 29 chr20 11899057 11899125 -60254757 - MLT1D LTR MaLR 0 467 402 1332 116 6 0 chr20 11899125 11899306 -60254576 + AluSg SINE Alu 1 182 -128 967 222 130 57 chr20 11899321 11899720 -60254162 - MLT1D LTR MaLR -55 412 4 1081 217 60 111 chr20 11899728 11900198 -60253684 + MLT1H LTR MaLR 58 503 -46 662 236 62 50 chr20 11901098 11901356 -60252526 - MIR SINE MIR 0 262 2 249 328 153 11 chr20 11901721 11901898 -60251984 - L3b LINE CR1 -280 1303 1102 790 158 16 43 chr20 11901902 11902086 -60251796 - MER53 DNA DNA -1 188 10 941 194 11 11 chr20 11902156 11902336 -60251546 - MER5A DNA MER1_type -8 181 2 1149 241 157 25 chr20 11902859 11903291 -60250591 + MLT1H LTR MaLR 41 529 -20 282 73 0 0 chr20 11903629 11903670 -60250212 + (TG)n Simple_repeat Simple_repeat 1 41 0 635 204 159 11 chr20 11904727 11904902 -60248980 + MER39 LTR ERV1 260 460 -247 2000 155 43 33 chr20 11904902 11905448 -60248434 + MLT2A2 LTR ERVL 1 554 0 754 198 24 61 chr20 11905467 11905679 -60248203 + MER39 LTR ERV1 504 707 0 366 221 29 10 chr20 11907219 11907323 -60246559 - MER103 DNA DNA -36 130 25 693 191 69 12 chr20 11907429 11907602 -60246280 - MER5A DNA MER1_type -3 186 4 308 216 108 10 chr20 11907819 11907921 -60245961 + L1ME3 LINE L1 6051 6162 0 484 292 49 5 chr20 11908898 11909083 -60244799 + L1ME3A LINE L1 5937 6129 -41 1045 335 97 10 chr20 11909699 11910310 -60243572 + L2 LINE L2 734 1397 -1917 1399 306 120 36 chr20 11910397 11911174 -60242708 + L2 LINE L2 1882 2723 -591 884 297 82 45 chr20 11911270 11911758 -60242124 + L2 LINE L2 2807 3312 -1 1934 205 21 34 chr20 11912798 11913329 -60240553 - L1ME1 LINE L1 -74 6092 5569 21 0 0 0 chr20 11914068 11914089 -60239793 + AT_rich Low_complexity Low_complexity 1 21 0 1398 218 155 15 chr20 11914147 11914541 -60239341 + MLT1H LTR MaLR 101 549 0 1642 164 49 80 chr20 11914693 11915083 -60238799 + MLT1B LTR MaLR 1 378 -12 1271 111 28 0 chr20 11915182 11915363 -60238519 + L1PA11 LINE L1 5987 6172 -2 231 236 18 0 chr20 11915944 11915999 -60237883 - MIR SINE MIR 0 262 207 204 182 0 0 chr20 11916357 11916401 -60237481 + (CATATA)n Simple_repeat Simple_repeat 4 47 0 24 53 0 0 chr20 11917194 11917232 -60236650 + AT_rich Low_complexity Low_complexity 1 38 0 2061 195 60 71 chr20 11917253 11918159 -60235723 + L1M3 LINE L1 4670 5558 -622 21 36 0 0 chr20 11919817 11919845 -60234037 + AT_rich Low_complexity Low_complexity 1 28 0 862 221 119 18 chr20 11920982 11921208 -60232674 + Tigger7 DNA MER2_type 19 267 -2220 488 242 0 0 chr20 11921206 11921305 -60232577 + Tigger7 DNA MER2_type 2489 2587 0 * 306 263 103 32 chr20 11921315 11921471 -60232411 + MLT1F LTR MaLR 126 292 -298 465 265 12 35 chr20 11921537 11921707 -60232175 + MLT1F LTR MaLR 370 535 -7 674 156 119 132 chr20 11922269 11922596 -60231286 + MER33 DNA MER1_type 2 324 0 1611 181 11 18 chr20 11922664 11922946 -60230936 + AluJo SINE Alu 1 280 -32 771 11 0 0 chr20 11922946 11923034 -60230848 + (TAAAA)n Simple_repeat Simple_repeat 2 89 0 774 219 65 77 chr20 11923674 11924042 -60229840 + LTR16A1 LTR ERVL 111 456 -1 1985 104 21 17 chr20 11924415 11924702 -60229180 - AluSx SINE Alu -24 288 1 2329 63 14 0 chr20 11925582 11925869 -60228013 - AluY SINE Alu -20 291 1 2192 111 13 3 chr20 11926652 11926950 -60226932 + AluSg SINE Alu 1 301 -9 1929 142 0 17 chr20 11928252 11928540 -60225342 + AluSx SINE Alu 1 283 -29 2420 58 0 29 chr20 11928540 11928873 -60225009 + AluY SINE Alu 1 311 0 22 0 0 0 chr20 11929402 11929424 -60224458 + AT_rich Low_complexity Low_complexity 1 22 0 307 232 289 37 chr20 11929527 11929717 -60224165 - MIR SINE MIR -13 249 12 455 225 18 36 chr20 11929803 11929914 -60223968 + L2 LINE L2 3164 3272 0 297 0 0 0 chr20 11930463 11930496 -60223386 + (TG)n Simple_repeat Simple_repeat 2 34 0 3503 182 89 45 chr20 11930626 11931612 -60222270 + L1MB7 LINE L1 4858 5904 -280 2215 136 0 16 chr20 11931612 11931928 -60221954 + AluSx SINE Alu 1 311 -1 3503 182 89 45 chr20 11931928 11932222 -60221660 + L1MB7 LINE L1 5904 6184 0 23 0 0 0 chr20 11932310 11932333 -60221549 + AT_rich Low_complexity Low_complexity 1 23 0 232 270 14 0 chr20 11932796 11932870 -60221012 - MLT1H LTR MaLR 0 549 475 383 235 88 7 chr20 11932962 11933098 -60220784 - MLT1H LTR MaLR -395 154 8 450 238 175 28 chr20 11933531 11933674 -60220208 - MER5A DNA MER1_type 0 189 26 314 284 107 45 chr20 11933682 11933880 -60220002 + MIR3 SINE MIR 3 210 -52 482 246 18 9 chr20 11934122 11934232 -60219650 - L2 LINE L2 -5 3308 3198 449 283 104 36 chr20 11934291 11934577 -60219305 + Charlie8 DNA MER1_type 7 302 -2115 1044 169 105 63 chr20 11934941 11935067 -60218815 - MLT1E1 LTR MaLR 0 654 535 1852 58 0 5 chr20 11935067 11935290 -60218592 - AluY SINE Alu -4 307 86 1044 169 105 63 chr20 11935290 11935528 -60218354 - MLT1E1 LTR MaLR -119 535 224 558 161 145 8 chr20 11935577 11935701 -60218181 - MLT1E1 LTR MaLR -507 147 7 1984 177 0 3 chr20 11936216 11936527 -60217355 + AluJo SINE Alu 1 310 -2 646 294 88 13 chr20 11936666 11936894 -60216988 - MIR SINE MIR 0 262 18 220 349 119 0 chr20 11937005 11937114 -60216768 + MER91 DNA MER1_type 75 190 0 1945 108 4 0 chr20 11937924 11938184 -60215698 - AluSg SINE Alu -13 297 37 309 51 0 0 chr20 11938734 11938773 -60215109 + (A)n Simple_repeat Simple_repeat 1 39 0 1011 161 27 103 chr20 11938983 11939080 -60214802 - MER33 DNA MER1_type -2261 324 221 2595 165 67 2 chr20 11939080 11939600 -60214282 + L1MD2 LINE L1 5793 6346 -13 1011 161 27 103 chr20 11939600 11939629 -60214253 - MER33 DNA MER1_type -2364 221 191 1834 199 28 40 chr20 11939629 11940052 -60213830 - MER47B DNA MER2_type 0 418 1 1011 161 27 103 chr20 11940052 11940254 -60213628 - MER33 DNA MER1_type -2394 191 20 2100 100 0 14 chr20 11940394 11940674 -60213208 + AluSx SINE Alu 1 276 -36 234 0 0 0 chr20 11941253 11941279 -60212603 + (A)n Simple_repeat Simple_repeat 1 26 0 430 225 70 21 chr20 11941351 11941493 -60212389 + MIR SINE MIR 97 245 -17 216 0 0 0 chr20 11941976 11942000 -60211882 + (TA)n Simple_repeat Simple_repeat 2 25 0 2560 223 54 25 chr20 11942671 11943389 -60210493 - L1ME1 LINE L1 -3 6163 5425 208 244 189 0 chr20 11943467 11943557 -60210325 - MIR SINE MIR -108 154 48 1241 292 60 24 chr20 11944180 11944792 -60209090 - L2 LINE L2 -209 3104 2469 2460 93 3 0 chr20 11947051 11947363 -60206519 - AluSq SINE Alu 0 313 1 1096 185 70 38 chr20 11947451 11947765 -60206117 - MER33 DNA MER1_type 0 324 1 194 299 146 6 chr20 11948230 11948394 -60205488 - MIR SINE MIR 0 262 76 2593 169 39 31 chr20 11949204 11949720 -60204162 - MLT2B1 LTR ERVL 0 520 1 313 200 29 0 chr20 11949727 11949797 -60204085 + MER5A DNA MER1_type 4 75 -114 2464 60 0 22 chr20 11950338 11950652 -60203230 - AluY SINE Alu -4 307 1 242 281 11 45 chr20 11951400 11951489 -60202393 + L2 LINE L2 3011 3096 -217 1031 262 108 22 chr20 11951543 11951905 -60201977 + LTR16C LTR ERVL 90 482 -9 449 108 15 0 chr20 11951917 11951982 -60201900 + L2 LINE L2 3248 3313 0 182 326 130 11 chr20 11952035 11952127 -60201755 - MER5A DNA MER1_type -22 167 65 1051 170 72 16 chr20 11952236 11952430 -60201452 - AluJb SINE Alu -10 302 98 664 132 0 0 chr20 11952432 11952538 -60201344 + AluJb SINE Alu 202 307 -5 359 225 9 99 chr20 11952538 11952649 -60201233 - MER45 DNA AcHobo -939 101 1 22 0 0 0 chr20 11953154 11953176 -60200706 + AT_rich Low_complexity Low_complexity 1 22 0 1186 206 70 96 chr20 11953487 11953861 -60200021 - MLT1A1 LTR MaLR 0 365 2 457 289 58 13 chr20 11954108 11954264 -60199618 + MIR SINE MIR 20 182 -80 459 259 175 34 chr20 11954288 11954489 -60199393 + L2 LINE L2 2330 2588 -726 1736 135 104 32 chr20 11954489 11954836 -60199046 - THE1C LTR MaLR -2 373 2 459 259 175 34 chr20 11954836 11954931 -60198951 + L2 LINE L2 2588 2668 -646 947 164 0 75 chr20 11954998 11955102 -60198780 + MER20 DNA MER1_type 1 82 -137 1539 185 41 41 chr20 11955102 11955465 -60198417 + MLT1A1 LTR MaLR 3 365 0 947 164 0 75 chr20 11955465 11955573 -60198309 + MER20 DNA MER1_type 82 197 -22 308 204 0 45 chr20 11956509 11956597 -60197285 + MER20 DNA MER1_type 130 213 -6 739 263 224 21 chr20 11956607 11957026 -60196856 + L2 LINE L2 2809 3312 -1 1936 125 26 22 chr20 11957783 11958094 -60195788 + AluSx SINE Alu 1 312 0 1131 260 162 15 chr20 11958930 11959693 -60194189 - L2 LINE L2 -1 3312 2451 1445 176 72 14 chr20 11959854 11960133 -60193749 + AluJo SINE Alu 1 295 -17 198 0 0 0 chr20 11960435 11960457 -60193425 + (T)n Simple_repeat Simple_repeat 1 22 0 359 192 14 0 chr20 11961186 11961259 -60192623 + MER116 DNA Mariner 7 80 0 21 0 0 0 chr20 11961287 11961308 -60192574 + AT_rich Low_complexity Low_complexity 1 21 0 255 309 82 0 chr20 11962931 11963028 -60190854 - L2 LINE L2 0 3313 3209 1425 187 29 64 chr20 11963243 11963618 -60190264 + MLT1A2 LTR MaLR 1 362 -12 299 294 33 0 chr20 11965183 11965275 -60188607 - MIR3 SINE MIR -9 199 105 953 190 23 9 chr20 11965451 11965667 -60188215 - MLT1D LTR MaLR 0 505 287 1227 221 151 34 chr20 11965936 11966709 -60187173 - Charlie2 DNA MER1_type -2 2860 1987 2106 118 0 7 chr20 11966709 11967020 -60186862 - AluSq SINE Alu 0 309 1 1227 221 151 34 chr20 11967020 11967049 -60186833 - Charlie2 DNA MER1_type -875 1987 1963 456 283 172 20 chr20 11967092 11967336 -60186546 - Charlie2 DNA MER1_type -2557 305 25 204 270 14 27 chr20 11968440 11968514 -60185368 + (TATATG)n Simple_repeat Simple_repeat 5 77 0 1752 236 77 33 chr20 11968588 11969199 -60184683 + L1ME1 LINE L1 5524 6161 -5 947 165 6 0 chr20 11969805 11969963 -60183919 - MER5A DNA MER1_type -3 186 28 1534 164 18 31 chr20 11970612 11970898 -60182984 + AluJb SINE Alu 1 282 -30 198 0 0 0 chr20 11970907 11970929 -60182953 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 1403 196 160 20 chr20 11971224 11971623 -60182259 + MLT1D LTR MaLR 51 505 0 354 246 43 22 chr20 11974923 11975061 -60178821 + L1ME2 LINE L1 6005 6145 -19 306 279 43 43 chr20 11975157 11975297 -60178585 + L1MC5 LINE L1 7772 7911 -50 360 0 0 0 chr20 11975431 11975471 -60178411 + (TTTA)n Simple_repeat Simple_repeat 3 42 0 1743 125 4 8 chr20 11975475 11975731 -60178151 - AluSx SINE Alu -37 275 21 486 253 158 19 chr20 11976427 11976585 -60177297 + MER5A DNA MER1_type 10 189 0 668 113 0 0 chr20 11977783 11977880 -60176002 - L1MC1 LINE L1 0 6333 6237 372 22 0 0 chr20 11979222 11979267 -60174615 + (CA)n Simple_repeat Simple_repeat 2 46 0 333 278 35 0 chr20 11979401 11979516 -60174366 + MER103 DNA DNA 47 165 -1 25 0 0 0 chr20 11980479 11980504 -60173378 + AT_rich Low_complexity Low_complexity 1 25 0 414 225 34 0 chr20 11980626 11980715 -60173167 + MIR SINE MIR 83 174 -88 193 200 0 0 chr20 11980800 11980840 -60173042 - L2 LINE L2 -5 3267 3228 257 279 65 19 chr20 11981253 11981407 -60172475 + HAL1b LINE L1 746 906 -442 567 232 130 16 chr20 11981968 11982153 -60171729 - MER63A DNA MER1_type 0 210 5 22 35 0 0 chr20 11983150 11983179 -60170703 + AT_rich Low_complexity Low_complexity 1 29 0 281 224 0 13 chr20 11983182 11983258 -60170624 + ALR/Alpha Satellite centromeric 32 106 -66 207 239 221 26 chr20 11983552 11983665 -60170217 + MIR SINE MIR 1 135 -127 362 320 59 26 chr20 11983792 11983945 -60169937 + MIR SINE MIR 7 164 -98 443 311 8 0 chr20 11984612 11984731 -60169151 - L2 LINE L2 -1 3271 3152 28 48 0 0 chr20 11985217 11985259 -60168623 + AT_rich Low_complexity Low_complexity 1 42 0 725 266 118 43 chr20 11986096 11986488 -60167394 - MER113 DNA MER1_type? -1 520 84 1825 172 0 10 chr20 11986488 11986784 -60167098 + AluSx SINE Alu 1 293 -19 725 266 118 43 chr20 11986784 11986875 -60167007 - MER113 DNA MER1_type? -437 84 1 900 213 25 15 chr20 11986908 11987110 -60166772 + MIR SINE MIR 46 249 -13 817 178 53 13 chr20 11987113 11987265 -60166617 - FRAM SINE Alu -18 158 1 417 153 0 0 chr20 11988165 11988237 -60165645 + GA-rich Low_complexity Low_complexity 3 74 0 479 238 135 0 chr20 11988579 11988705 -60165177 + MIR SINE MIR 38 180 -82 316 317 0 0 chr20 11989554 11989658 -60164224 + MLT1H LTR MaLR 1 104 -445 2943 110 5 0 chr20 11989659 11990088 -60163794 + L1PB3 LINE L1 5708 6138 -16 975 99 0 0 chr20 11990089 11990230 -60163652 + (GGAA)n Simple_repeat Simple_repeat 2 142 0 483 70 70 0 chr20 11990230 11990316 -60163566 + GA-rich Low_complexity Low_complexity 2 93 0 215 204 74 19 chr20 11990394 11990448 -60163434 + L2 LINE L2 3256 3312 -1 554 264 45 0 chr20 11990648 11990803 -60163079 + MLT1J LTR MaLR 1 162 -349 2522 96 8 3 chr20 11991420 11991773 -60162109 - THE1A LTR MaLR 0 355 1 11482 103 6 3 chr20 11991773 11993349 -60160533 - THE1A-int LTR MaLR 0 1580 1 2713 79 6 3 chr20 11993349 11993703 -60160179 - THE1A LTR MaLR 0 355 1 1464 176 106 3 chr20 11993703 11994013 -60159869 + MER2 DNA MER2_type 1 344 0 439 251 169 5 chr20 11994306 11994501 -60159381 + MIR SINE MIR 24 250 -12 376 311 12 25 chr20 11994916 11995077 -60158805 + LTR16A LTR ERVL 2 160 -290 694 268 0 18 chr20 11995118 11995286 -60158596 + LTR16A LTR ERVL 276 440 -10 508 295 32 6 chr20 11995299 11995455 -60158427 - MIR SINE MIR -101 161 2 859 231 101 75 chr20 11995587 11996025 -60157857 - LTR33A LTR ERVL -2 521 73 333 303 25 37 chr20 11996811 11996973 -60156909 + MIR3 SINE MIR 44 203 -5 559 255 135 85 chr20 11997165 11997670 -60156212 + MLT1H LTR MaLR 4 533 -16 390 196 21 10 chr20 11997801 11997898 -60155984 - MER103 DNA DNA -68 98 1 1387 178 159 0 chr20 11998273 11998593 -60155289 + MER93b LTR ERV1 3 373 0 214 254 16 16 chr20 11999354 11999417 -60154465 + (TGGA)n Simple_repeat Simple_repeat 1 63 0 659 195 0 7 chr20 12000249 12000398 -60153484 + CT-rich Low_complexity Low_complexity 3 150 0 549 200 0 0 chr20 12000404 12000509 -60153373 - FLAM_A SINE Alu -1 141 37 1468 288 76 10 chr20 12001708 12002472 -60151410 - L2 LINE L2 -1 3312 2491 214 320 68 59 chr20 12003054 12003276 -60150606 + L2 LINE L2 2836 3059 -213 2367 153 65 0 chr20 12004179 12004579 -60149303 - MSTB LTR MaLR 0 426 1 234 289 167 42 chr20 12004595 12004931 -60148951 - L2 LINE L2 -2 3311 2934 1279 266 85 28 chr20 12005360 12005853 -60148029 + MLT1G1 LTR MaLR 75 595 0 240 357 18 120 chr20 12006896 12007238 -60146644 + L2 LINE L2 2963 3269 -3 1030 231 159 22 chr20 12007787 12008241 -60145641 - LTR33 LTR ERVL -4 517 2 1216 236 31 12 chr20 12008525 12008851 -60145031 + LTR16C LTR ERVL 160 491 0 467 298 19 25 chr20 12008991 12009149 -60144733 + MIR3 SINE MIR 26 182 -26 213 232 145 0 chr20 12009554 12009623 -60144259 + MIR SINE MIR 54 132 -76 231 152 0 0 chr20 12009772 12009818 -60144064 - L1MA9 LINE L1 0 6312 6267 21 0 0 0 chr20 12010705 12010726 -60143156 + AT_rich Low_complexity Low_complexity 1 21 0 486 275 66 0 chr20 12010807 12010974 -60142908 + MER5B DNA MER1_type 1 178 0 1962 152 3 0 chr20 12011492 12011788 -60142094 + AluSx SINE Alu 3 299 -13 878 172 25 105 chr20 12012017 12012255 -60141627 - MER20 DNA MER1_type 0 219 1 219 36 0 0 chr20 12012748 12012776 -60141106 + (CA)n Simple_repeat Simple_repeat 1 28 0 627 265 70 25 chr20 12012899 12013099 -60140783 - MLT1H1 LTR MaLR -1 554 346 450 167 0 0 chr20 12013729 12013813 -60140069 + GA-rich Low_complexity Low_complexity 2 85 0 1031 241 43 18 chr20 12015498 12015780 -60138102 - LTR16C LTR ERVL -10 481 193 266 330 91 0 chr20 12015815 12015903 -60137979 - LTR16C LTR ERVL -367 124 29 2982 122 9 2 chr20 12015904 12016365 -60137517 + L1MB3 LINE L1 5675 6138 -45 1612 136 124 12 chr20 12016369 12016627 -60137255 + AluSx SINE Alu 1 287 -25 2398 136 67 12 chr20 12016653 12017057 -60136825 - MSTB LTR MaLR 0 426 1 2116 103 0 7 chr20 12017070 12017351 -60136531 + AluSx SINE Alu 1 279 -33 531 45 0 0 chr20 12017352 12017418 -60136464 + (TAGA)n Simple_repeat Simple_repeat 1 66 0 22 70 0 0 chr20 12017650 12017693 -60136189 + AT_rich Low_complexity Low_complexity 1 43 0 367 280 193 13 chr20 12017747 12017897 -60135985 + MER5A DNA MER1_type 13 189 0 387 273 103 44 chr20 12018681 12019000 -60134882 + L1ME4a LINE L1 5582 5919 -202 231 114 0 0 chr20 12019017 12019052 -60134830 + (CA)n Simple_repeat Simple_repeat 2 36 0 393 330 89 6 chr20 12019062 12019241 -60134641 + L2 LINE L2 3103 3296 -17 281 248 60 40 chr20 12019271 12019420 -60134462 + L1ME4a LINE L1 5941 6092 -29 22 0 0 0 chr20 12019853 12019875 -60134007 + AT_rich Low_complexity Low_complexity 1 22 0 1390 191 53 18 chr20 12020548 12020831 -60133051 - AluJo SINE Alu -17 295 3 1440 211 42 15 chr20 12020876 12021208 -60132674 + MER58B DNA MER1_type 1 341 0 180 111 0 0 chr20 12021329 12021356 -60132526 + (CCTA)n Simple_repeat Simple_repeat 1 27 0 23 0 0 0 chr20 12021613 12021636 -60132246 + AT_rich Low_complexity Low_complexity 1 23 0 422 245 179 33 chr20 12022563 12022898 -60130984 + L1ME4a LINE L1 5733 6116 -5 558 118 0 12 chr20 12024629 12024714 -60129168 + AluS SINE Alu 1 84 -228 192 152 0 0 chr20 12026317 12026350 -60127532 + (TTCA)n Simple_repeat Simple_repeat 1 33 0 1013 176 70 12 chr20 12026392 12026649 -60127233 + MER33 DNA MER1_type 1 262 -62 305 65 0 0 chr20 12026742 12026788 -60127094 - L1PA4 LINE L1 0 6155 6110 1459 12 0 0 chr20 12026788 12026956 -60126926 + L1PA2 LINE L1 5958 6125 -30 854 314 64 31 chr20 12027007 12027615 -60126267 - L2 LINE L2 -74 3239 2601 519 310 62 18 chr20 12027633 12027907 -60125975 + L1ME4a LINE L1 5505 5790 -331 674 276 63 37 chr20 12027937 12028400 -60125482 + L1M4 LINE L1 4211 4685 -1461 229 275 29 0 chr20 12028655 12028724 -60125158 + (TA)n Simple_repeat Simple_repeat 1 71 0 234 91 0 0 chr20 12028889 12028922 -60124960 + (CA)n Simple_repeat Simple_repeat 1 33 0 22 35 0 0 chr20 12029199 12029228 -60124654 + AT_rich Low_complexity Low_complexity 1 29 0 2050 20 20 0 chr20 12029379 12029623 -60124259 + L1PA4 LINE L1 5906 6154 -1 25 0 0 0 chr20 12029671 12029696 -60124186 + AT_rich Low_complexity Low_complexity 1 25 0 2247 108 0 0 chr20 12030838 12031125 -60122757 - AluSx SINE Alu -25 287 1 2237 108 7 0 chr20 12032503 12032800 -60121082 + AluSx SINE Alu 1 299 -13 22 35 0 0 chr20 12033286 12033315 -60120567 + AT_rich Low_complexity Low_complexity 1 29 0 300 224 232 8 chr20 12034112 12034237 -60119645 + L1ME4a LINE L1 5969 6121 0 25 31 0 0 chr20 12034825 12034857 -60119025 + AT_rich Low_complexity Low_complexity 1 32 0 23 0 0 0 chr20 12034994 12035017 -60118865 + AT_rich Low_complexity Low_complexity 1 23 0 285 281 117 23 chr20 12035056 12035184 -60118698 - MIR3 SINE MIR 0 208 69 433 124 11 11 chr20 12036112 12036201 -60117681 + (TC)n Simple_repeat Simple_repeat 1 89 0 2354 273 98 32 chr20 12036559 12037867 -60116015 + L2 LINE L2 1927 3313 0 426 221 16 16 chr20 12037957 12038084 -60115798 + L1MC5 LINE L1 7815 7941 -20 438 281 154 15 chr20 12038084 12038351 -60115531 - L1ME LINE L1 -299 5822 5519 728 238 107 16 chr20 12038351 12038495 -60115387 + MER5C DNA MER1_type 7 137 -187 237 65 0 0 chr20 12038495 12038526 -60115356 + (TG)n Simple_repeat Simple_repeat 2 32 0 728 238 107 16 chr20 12038526 12038625 -60115257 + MER5C DNA MER1_type 137 272 -52 686 315 100 53 chr20 12038662 12038735 -60115147 - L1ME LINE L1 -748 5398 5330 589 76 0 0 chr20 12038735 12038814 -60115068 + MADE1 DNA Mariner 2 80 0 686 315 100 53 chr20 12038814 12039964 -60113918 - L1ME LINE L1 -816 5330 4245 23 0 0 0 chr20 12040062 12040085 -60113797 + AT_rich Low_complexity Low_complexity 1 23 0 1560 248 125 15 chr20 12040606 12041077 -60112805 + MLT1G1 LTR MaLR 73 595 0 1675 214 60 13 chr20 12041407 12041870 -60112012 + Charlie1b DNA MER1_type 38 522 -1 896 47 0 0 chr20 12041924 12042030 -60111852 + AluYa5/8 SINE Alu 191 296 -14 2174 124 0 0 chr20 12042912 12043210 -60110672 + AluSx SINE Alu 1 298 -14 249 315 0 0 chr20 12043468 12043541 -60110341 - MLT1J1 LTR MaLR -10 436 364 557 157 0 0 chr20 12044591 12044674 -60109208 + FRAM SINE Alu 73 155 -21 664 203 84 55 chr20 12045450 12045652 -60108230 + MER3 DNA MER1_type 1 208 -1 267 103 0 0 chr20 12046100 12046139 -60107743 + (TA)n Simple_repeat Simple_repeat 1 39 0 255 284 0 0 chr20 12046288 12046376 -60107506 + L1MC4 LINE L1 6614 6701 -1341 * 262 268 0 0 chr20 12046310 12046392 -60107490 - L1MC4 LINE L1 -1347 6695 6614 204 125 0 0 chr20 12046403 12046435 -60107447 + (TA)n Simple_repeat Simple_repeat 2 33 0 189 0 0 0 chr20 12047803 12047824 -60106058 + (A)n Simple_repeat Simple_repeat 1 21 0 1918 156 7 0 chr20 12047824 12048125 -60105757 + AluSx SINE Alu 1 303 -9 422 214 71 77 chr20 12050367 12050563 -60103319 + L1MC5 LINE L1 7761 7955 -6 373 269 179 53 chr20 12052131 12052488 -60101394 + MLT1J LTR MaLR 110 511 0 286 306 78 32 chr20 12053349 12053568 -60100314 - MIR SINE MIR -30 232 4 231 61 0 0 chr20 12054798 12054831 -60099051 + (CA)n Simple_repeat Simple_repeat 2 34 0 25 75 0 0 chr20 12055784 12055837 -60098045 + AT_rich Low_complexity Low_complexity 1 53 0 27 0 0 0 chr20 12056060 12056087 -60097795 + AT_rich Low_complexity Low_complexity 1 27 0 282 283 0 10 chr20 12056131 12056230 -60097652 + (TA)n Simple_repeat Simple_repeat 2 99 0 249 139 0 0 chr20 12056851 12056894 -60096988 + (GAAAA)n Simple_repeat Simple_repeat 4 46 0 1037 227 44 17 chr20 12057868 12058163 -60095719 + L1M4 LINE L1 2128 2430 -3716 246 309 37 12 chr20 12058194 12058275 -60095607 - MIR SINE MIR -91 117 35 459 237 89 37 chr20 12058442 12058577 -60095305 + MIR SINE MIR 50 191 -71 243 259 138 0 chr20 12058571 12058687 -60095195 - MIR SINE MIR -128 134 3 * 1960 70 0 4 chr20 12059985 12060226 -60093656 - AluY SINE Alu -11 300 61 1177 174 5 28 chr20 12061086 12061298 -60092584 - MLT1B LTR MaLR 0 390 184 294 351 87 16 chr20 12061316 12061501 -60092381 + MIR SINE MIR 27 224 -38 270 56 0 0 chr20 12061660 12061696 -60092186 + (TG)n Simple_repeat Simple_repeat 2 37 0 339 273 25 41 chr20 12063457 12063578 -60090304 - L2 LINE L2 -181 3091 2973 182 369 82 8 chr20 12063745 12063867 -60090015 - L2 LINE L2 -541 2773 2643 232 184 20 20 chr20 12063878 12063927 -60089955 + L2 LINE L2 3173 3221 -92 333 315 100 30 chr20 12064088 12064358 -60089524 - L2 LINE L2 -839 2475 2187 35 0 0 0 chr20 12065006 12065041 -60088841 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr20 12065214 12065235 -60088647 + AT_rich Low_complexity Low_complexity 1 21 0 485 275 55 25 chr20 12065493 12065844 -60088038 + LTR33 LTR ERVL 103 521 0 2005 109 88 0 chr20 12066395 12066680 -60087202 + AluSx SINE Alu 1 310 -2 249 33 0 0 chr20 12066686 12066716 -60087166 + (GAAAA)n Simple_repeat Simple_repeat 4 33 0 1891 160 7 3 chr20 12066776 12067082 -60086800 + AluJo SINE Alu 1 307 -5 848 246 105 75 chr20 12067667 12068212 -60085670 + L1ME4a LINE L1 5559 6119 -2 2189 116 0 0 chr20 12068562 12068872 -60085010 - AluSx SINE Alu 0 310 1 541 255 35 78 chr20 12069141 12069372 -60084510 + Charlie8 DNA MER1_type 1 221 -2196 455 371 48 0 chr20 12069825 12070035 -60083847 + MIR SINE MIR 6 225 -37 405 0 0 0 chr20 12070204 12070249 -60083633 + (TTTTG)n Simple_repeat Simple_repeat 3 47 0 375 238 89 10 chr20 12070844 12070945 -60082937 - MIR SINE MIR -110 152 44 730 247 36 76 chr20 12071077 12071148 -60082734 - Charlie4a DNA MER1_type -1460 501 429 1561 202 13 19 chr20 12071148 12071455 -60082427 - AluJo SINE Alu -7 305 1 730 247 36 76 chr20 12071455 12071658 -60082224 - Charlie4a DNA MER1_type -1532 429 238 321 289 10 10 chr20 12071628 12071732 -60082150 - Charlie4a DNA MER1_type -404 104 1 * 273 197 0 0 chr20 12075910 12075971 -60077911 + (TG)n Simple_repeat Simple_repeat 1 61 0 338 277 195 61 chr20 12075989 12076466 -60077416 + L1M2 LINE L1 587 1127 -5722 * 389 284 107 81 chr20 12076396 12076843 -60077039 - L1M2 LINE L1 -5716 1133 675 308 289 102 8 chr20 12076844 12076972 -60076910 - MIR SINE MIR -21 241 102 2249 88 0 33 chr20 12077774 12078080 -60075802 + AluSq SINE Alu 1 296 -17 518 155 24 0 chr20 12078161 12078245 -60075637 - MER5A DNA MER1_type -74 115 30 425 291 15 30 chr20 12078298 12078432 -60075450 - MIR3 SINE MIR -62 146 15 648 252 46 0 chr20 12078529 12078680 -60075202 - MLT1H LTR MaLR 0 549 392 384 236 5 5 chr20 12078822 12078919 -60074963 - MLT1H LTR MaLR -274 159 71 1634 142 28 28 chr20 12079220 12079502 -60074380 - AluJo SINE Alu -18 294 13 289 255 103 28 chr20 12079538 12079683 -60074199 - L2 LINE L2 -7 3306 3151 1905 157 3 10 chr20 12079690 12079989 -60073893 + AluSx SINE Alu 1 297 -15 279 0 0 0 chr20 12079989 12080020 -60073862 + (TA)n Simple_repeat Simple_repeat 1 31 0 261 57 0 0 chr20 12080077 12080112 -60073770 + (TC)n Simple_repeat Simple_repeat 2 36 0 787 261 160 14 chr20 12080116 12080588 -60073294 - L2 LINE L2 -157 3156 2614 2830 91 11 11 chr20 12080640 12081004 -60072878 - THE1B LTR MaLR 0 364 1 556 255 25 6 chr20 12082511 12082668 -60071214 - L1ME3 LINE L1 -14 6148 5989 608 228 39 7 chr20 12082685 12082944 -60070938 - L1ME3 LINE L1 -167 6011 5749 2081 104 43 0 chr20 12083004 12083283 -60070599 + AluSx SINE Alu 1 291 -21 622 97 29 0 chr20 12083306 12083409 -60070473 + GA-rich Low_complexity Low_complexity 3 108 0 238 167 0 0 chr20 12083409 12083445 -60070437 + polypurine Low_complexity Low_complexity 5 40 0 21 36 0 0 chr20 12084182 12084210 -60069672 + AT_rich Low_complexity Low_complexity 1 28 0 2081 80 0 4 chr20 12084326 12084590 -60069292 - AluY SINE Alu -18 293 31 1544 135 5 0 chr20 12084847 12085069 -60068813 + AluSx SINE Alu 1 223 -89 519 351 58 0 chr20 12085094 12085265 -60068617 + MER91A DNA MER1_type 1 181 -15 241 297 135 31 chr20 12085476 12085705 -60068177 - MLT1H LTR MaLR -296 253 1 232 309 52 10 chr20 12085726 12085823 -60068059 + L2 LINE L2 3204 3304 -9 22 0 0 0 chr20 12085879 12085901 -60067981 + AT_rich Low_complexity Low_complexity 1 22 0 423 103 0 0 chr20 12085903 12085971 -60067911 - L1MA7 LINE L1 0 6291 6224 1158 116 29 0 chr20 12086327 12086500 -60067382 + L1MA4 LINE L1 6117 6294 -6 1944 120 55 0 chr20 12086508 12086783 -60067099 + AluSq SINE Alu 1 290 -23 292 236 0 0 chr20 12086986 12087058 -60066824 - L1MC/D LINE L1 -1969 5839 5768 589 294 163 19 chr20 12087433 12087997 -60065885 - HAL1b LINE L1 -703 645 1 2074 206 28 32 chr20 12088747 12089243 -60064639 - MLT1D LTR MaLR 0 505 12 1827 128 21 40 chr20 12089563 12089891 -60063991 + MER1B DNA MER1_type 18 339 0 27 0 0 0 chr20 12089961 12089988 -60063894 + AT_rich Low_complexity Low_complexity 1 27 0 23 33 0 0 chr20 12090301 12090331 -60063551 + AT_rich Low_complexity Low_complexity 1 30 0 697 153 8 23 chr20 12090961 12091092 -60062790 - MLT2B2 LTR ERVL -386 129 1 208 280 20 0 chr20 12091092 12091142 -60062740 + MIR SINE MIR 206 256 -6 2574 59 0 0 chr20 12092237 12092542 -60061340 + AluY SINE Alu 1 305 -6 1197 213 12 24 chr20 12092702 12092956 -60060926 - AluJb SINE Alu -61 251 1 198 0 0 0 chr20 12093037 12093059 -60060823 + (A)n Simple_repeat Simple_repeat 1 22 0 242 300 33 11 chr20 12093062 12093152 -60060730 + MLT1J2 LTR MaLR 68 159 -291 245 250 0 0 chr20 12093228 12093280 -60060602 + MLT1J2 LTR MaLR 273 324 -126 1280 237 95 21 chr20 12093579 12093917 -60059965 - MLT1E2 LTR MaLR 0 626 264 5942 129 27 16 chr20 12093922 12094771 -60059111 + Tigger1 DNA MER2_type 1 839 -1579 2071 124 34 0 chr20 12094771 12095062 -60058820 + AluSx SINE Alu 1 301 -11 5942 129 27 16 chr20 12095062 12095085 -60058797 + Tigger1 DNA MER2_type 839 860 -1558 2355 94 0 3 chr20 12095085 12095384 -60058498 + AluY SINE Alu 1 298 -13 5942 129 27 16 chr20 12095384 12096166 -60057716 + Tigger1 DNA MER2_type 860 1958 -460 336 117 0 17 chr20 12096167 12096227 -60057655 - L1PA8 LINE L1 0 6172 6114 492 133 33 67 chr20 12096245 12096264 -60057618 + Tigger1 DNA MER2_type 1157 1175 -1243 2321 101 0 0 chr20 12096264 12096562 -60057320 + AluY SINE Alu 1 298 -13 492 133 33 67 chr20 12096562 12096632 -60057250 + Tigger1 DNA MER2_type 1175 1243 -1175 6049 88 52 6 chr20 12096641 12097491 -60056391 - L1PA10 LINE L1 -26 6142 5254 2293 172 28 16 chr20 12097497 12097933 -60055949 + Tigger1 DNA MER2_type 1947 2387 -31 3187 115 87 18 chr20 12097933 12098428 -60055454 + MER1A DNA MER1_type 1 529 0 231 250 0 0 chr20 12098428 12098467 -60055415 + Tigger1 DNA MER2_type 2380 2418 0 530 174 85 177 chr20 12098470 12098660 -60055222 - MLT1E2 LTR MaLR -370 256 99 2142 116 0 16 chr20 12098660 12098970 -60054912 - AluSx SINE Alu -7 305 1 530 174 85 177 chr20 12098970 12099061 -60054821 - MLT1E2 LTR MaLR -527 99 1 2126 130 0 10 chr20 12099379 12099680 -60054202 - AluSx SINE Alu -14 298 1 549 190 50 0 chr20 12100157 12100257 -60053625 + MER96B DNA MER1_type? 4 108 -309 1557 152 29 63 chr20 12100271 12100587 -60053295 - MER44D DNA MER2_type -34 575 1 2168 110 0 0 chr20 12100653 12100963 -60052919 - AluSx SINE Alu 0 310 1 2830 131 44 11 chr20 12101383 12101745 -60052137 + MER4C LTR ERV1 1 382 -83 186 43 0 0 chr20 12101745 12101768 -60052114 + (TTG)n Simple_repeat Simple_repeat 2 24 0 2830 131 44 11 chr20 12101768 12101855 -60052027 + MER4C LTR ERV1 382 465 0 23 0 0 0 chr20 12101871 12101894 -60051988 + AT_rich Low_complexity Low_complexity 1 23 0 4635 91 0 39 chr20 12101894 12102543 -60051339 - L1PB2 LINE L1 -4 6147 5524 23 54 0 0 chr20 12102949 12102986 -60050896 + AT_rich Low_complexity Low_complexity 1 37 0 280 264 16 50 chr20 12103167 12103288 -60050594 + L1ME LINE L1 5673 5789 -332 339 269 32 0 chr20 12103322 12103416 -60050466 + MIR SINE MIR 46 154 -62 643 250 7 0 chr20 12103511 12103651 -60050231 - MER3 DNA MER1_type -5 204 64 425 281 37 0 chr20 12103707 12103842 -60050040 + MIR SINE MIR 45 184 -78 205 146 42 0 chr20 12105289 12105337 -60048545 + T-rich Low_complexity Low_complexity 5 54 0 294 346 20 50 chr20 12106112 12106314 -60047568 - MLT1I LTR MaLR -123 286 91 401 299 20 7 chr20 12106495 12106642 -60047240 - MIR SINE MIR -14 248 100 2343 95 0 40 chr20 12106852 12107178 -60046704 + AluSp SINE Alu 1 313 0 614 273 40 40 chr20 12107313 12107566 -60046316 - MLT1L LTR MaLR -356 259 7 438 278 108 57 chr20 12107575 12107787 -60046095 - MIR SINE MIR -25 237 15 330 251 37 61 chr20 12107801 12107921 -60045961 + MER104 DNA Tc2 1 117 -1781 2834 169 49 6 chr20 12107921 12108448 -60045434 - MER44D DNA MER2_type 0 605 1 330 251 37 61 chr20 12108448 12108490 -60045392 + MER104 DNA Tc2 117 159 -21 2383 90 7 0 chr20 12108538 12108837 -60045045 + AluSp SINE Alu 1 301 -12 1635 163 71 14 chr20 12109476 12109771 -60044111 - AluJo SINE Alu 0 312 1 1835 149 54 3 chr20 12110052 12110347 -60043535 - AluJb SINE Alu -2 310 1 739 232 42 70 chr20 12110614 12110873 -60043009 - LTR16A1 LTR ERVL -145 312 61 3669 89 42 0 chr20 12111311 12111838 -60042044 + L1PA13 LINE L1 5613 6161 -2 834 216 27 5 chr20 12112031 12112141 -60041741 - MER5A DNA MER1_type 0 189 72 1622 190 36 13 chr20 12112141 12112446 -60041436 - AluSx SINE Alu 0 312 1 834 216 27 5 chr20 12112446 12112520 -60041362 - MER5A DNA MER1_type -117 72 1 460 259 38 23 chr20 12113020 12113151 -60040731 + L2 LINE L2 3180 3312 -1 1190 274 57 9 chr20 12113707 12114127 -60039755 + MLT1J1 LTR MaLR 7 446 0 216 164 27 14 chr20 12114138 12114211 -60039671 + (TA)n Simple_repeat Simple_repeat 1 74 0 224 339 144 6 chr20 12114286 12114460 -60039422 - L2 LINE L2 -567 2747 2550 193 381 0 0 chr20 12114510 12114573 -60039309 + L2 LINE L2 3246 3308 -5 705 260 53 18 chr20 12114788 12115015 -60038867 - MLT1J2 LTR MaLR -177 273 39 27 0 0 0 chr20 12115071 12115098 -60038784 + AT_rich Low_complexity Low_complexity 1 27 0 2204 119 0 0 chr20 12115308 12115603 -60038279 - AluSx SINE Alu -17 295 1 30 59 0 0 chr20 12116027 12116078 -60037804 + AT_rich Low_complexity Low_complexity 1 51 0 738 229 73 41 chr20 12116731 12117045 -60036837 - L1M4 LINE L1 -3201 2945 2622 1066 181 99 81 chr20 12117647 12118160 -60035722 + MER34B LTR ERV1 1 560 -5 541 158 137 36 chr20 12118185 12118324 -60035558 + MSTB1 LTR MaLR 220 372 -60 362 240 31 0 chr20 12118371 12118467 -60035415 - LTR67 LTR ERVL 0 557 459 561 146 0 0 chr20 12118624 12118713 -60035169 - LTR8 LTR ERV1 0 691 603 1605 104 68 12 chr20 12118713 12118962 -60034920 + AluSx SINE Alu 39 301 -11 1808 105 25 7 chr20 12118962 12119239 -60034643 - LTR8 LTR ERV1 -409 282 1 557 273 31 0 chr20 12119607 12119735 -60034147 + MIR3 SINE MIR 36 167 -41 656 232 48 43 chr20 12119745 12119869 -60034013 + MER3 DNA MER1_type 1 128 -81 2231 124 0 0 chr20 12119869 12120175 -60033707 + AluSx SINE Alu 1 306 -6 656 232 48 43 chr20 12120175 12120257 -60033625 + MER3 DNA MER1_type 128 208 -1 205 306 12 71 chr20 12120261 12120346 -60033536 + L2 LINE L2 3192 3271 -42 1530 262 63 75 chr20 12120391 12120822 -60033060 - L2 LINE L2 -32 3281 2846 2095 138 0 0 chr20 12120822 12121112 -60032770 + AluSx SINE Alu 6 295 -17 1530 262 63 75 chr20 12121112 12121266 -60032616 - L2 LINE L2 -467 2846 2692 2101 108 0 32 chr20 12121266 12121299 -60032583 - AluSg SINE Alu -6 304 271 210 37 0 0 chr20 12121299 12121326 -60032556 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2101 108 0 32 chr20 12121326 12121606 -60032276 - AluSg SINE Alu -39 271 1 1530 262 63 75 chr20 12121606 12121617 -60032265 - L2 LINE L2 -621 2692 2682 1536 155 41 28 chr20 12121617 12121908 -60031974 - AluJo SINE Alu -17 295 1 1530 262 63 75 chr20 12121908 12122359 -60031523 - L2 LINE L2 -631 2682 2248 24 0 0 0 chr20 12122607 12122631 -60031251 + AT_rich Low_complexity Low_complexity 1 24 0 1074 264 53 48 chr20 12123490 12123925 -60029957 + LTR16A1 LTR ERVL 12 448 -9 590 228 64 35 chr20 12124369 12124444 -60029438 + MER5A DNA MER1_type 9 80 -109 2142 128 0 3 chr20 12124444 12124740 -60029142 + AluSx SINE Alu 13 307 -5 590 228 64 35 chr20 12124740 12124835 -60029047 + MER5A DNA MER1_type 80 184 -5 822 206 29 12 chr20 12125219 12125389 -60028493 + MER5A DNA MER1_type 6 178 -11 189 0 0 0 chr20 12126937 12126958 -60026924 + (T)n Simple_repeat Simple_repeat 1 21 0 2132 144 0 0 chr20 12127271 12127583 -60026299 + AluSx SINE Alu 1 312 0 34 65 0 0 chr20 12127656 12127718 -60026164 + AT_rich Low_complexity Low_complexity 1 62 0 407 228 359 11 chr20 12128290 12128474 -60025408 + MIR SINE MIR 12 259 -3 28 29 0 0 chr20 12128474 12128509 -60025373 + AT_rich Low_complexity Low_complexity 1 35 0 337 143 32 0 chr20 12128984 12129047 -60024835 - MLT1F1 LTR MaLR -433 134 70 596 57 23 0 chr20 12129582 12129670 -60024212 + L1PB1 LINE L1 6061 6150 -1 301 366 170 0 chr20 12130965 12131189 -60022693 - MIR SINE MIR 0 262 1 273 186 17 17 chr20 12131593 12131652 -60022230 - MLT1H1 LTR MaLR -196 394 336 549 288 187 9 chr20 12131692 12131911 -60021971 - MLT1H1 LTR MaLR -285 270 13 321 130 188 0 chr20 12132217 12132286 -60021596 - L2 LINE L2 -2 3311 3230 238 292 26 26 chr20 12132345 12132458 -60021424 - L2 LINE L2 -89 3224 3112 230 135 39 0 chr20 12132795 12132847 -60021035 + GA-rich Low_complexity Low_complexity 3 56 0 330 320 74 61 chr20 12132857 12133088 -60020794 + L2 LINE L2 3039 3272 0 2087 129 6 24 chr20 12134015 12134356 -60019526 - THE1B LTR MaLR 0 364 30 485 300 41 6 chr20 12134738 12134884 -60018998 + MIR SINE MIR 42 196 -66 1563 128 13 0 chr20 12134884 12135111 -60018771 - MER30 DNA MER1_type 0 230 1 485 300 41 6 chr20 12135111 12135134 -60018748 + MIR SINE MIR 196 217 -45 321 336 82 16 chr20 12135172 12135294 -60018588 - L2 LINE L2 -21 3251 3122 1255 225 107 60 chr20 12135894 12136239 -60017643 + L1MC5 LINE L1 7126 7453 -508 2041 141 23 0 chr20 12136239 12136543 -60017339 + AluSx SINE Alu 1 311 -1 1255 225 107 60 chr20 12136543 12136961 -60016921 + L1MC5 LINE L1 7453 7925 -36 1840 169 0 20 chr20 12137351 12137647 -60016235 - AluJo SINE Alu -22 290 1 269 263 38 53 chr20 12137716 12137779 -60016103 - MER90 LTR ERV1 -103 511 449 1939 167 25 11 chr20 12137779 12138139 -60015743 - MLT1A1 LTR MaLR 0 365 1 269 263 38 53 chr20 12138139 12138208 -60015674 - MER90 LTR ERV1 -165 449 381 246 224 13 26 chr20 12138331 12138407 -60015475 - MER90 LTR ERV1 -452 162 88 2205 107 7 3 chr20 12138687 12138986 -60014896 + AluSx SINE Alu 1 300 -12 351 0 0 0 chr20 12139405 12139444 -60014438 + (T)n Simple_repeat Simple_repeat 1 39 0 795 179 12 13 chr20 12139563 12139797 -60014085 + MLT1A1 LTR MaLR 1 338 -27 213 251 14 7 chr20 12139967 12140089 -60013793 + GA-rich Low_complexity Low_complexity 1 121 -324 2077 132 0 0 chr20 12140089 12140384 -60013498 + AluSx SINE Alu 1 295 -17 213 251 14 7 chr20 12140384 12140409 -60013473 + GA-rich Low_complexity Low_complexity 121 445 0 * 545 0 0 15 chr20 12140407 12140473 -60013409 + (GGAA)n Simple_repeat Simple_repeat 4 68 0 285 331 78 7 chr20 12140477 12140619 -60013263 - MIR SINE MIR 0 262 111 2134 101 45 0 chr20 12141506 12141793 -60012089 + AluSx SINE Alu 1 300 -12 244 369 77 17 chr20 12141793 12141984 -60011898 - MIR3 SINE MIR -58 204 7 785 234 81 90 chr20 12142109 12142443 -60011439 + MLT1H LTR MaLR 219 549 0 708 200 4 130 chr20 12142885 12143155 -60010727 + MER106A DNA MER1_type 1 236 0 4016 147 15 26 chr20 12144387 12145055 -60008827 - MER50 LTR ERV1 -20 714 53 270 0 0 0 chr20 12145055 12145085 -60008797 + (TG)n Simple_repeat Simple_repeat 2 31 0 4016 147 15 26 chr20 12145085 12145138 -60008744 - MER50 LTR ERV1 -681 53 1 1710 158 29 18 chr20 12145808 12146086 -60007796 + AluJo SINE Alu 1 281 -31 2037 102 53 0 chr20 12146086 12146368 -60007514 - AluSx SINE Alu -14 298 1 694 282 116 29 chr20 12147141 12147452 -60006430 - MLT1H LTR MaLR -2 593 311 2796 139 19 0 chr20 12147452 12147876 -60006006 - MSTB1 LTR MaLR 0 432 1 694 282 116 29 chr20 12147876 12148066 -60005816 - MLT1H LTR MaLR -284 311 1 296 287 99 10 chr20 12148069 12148170 -60005712 + MER5B DNA MER1_type 22 131 -47 945 189 29 0 chr20 12148389 12148564 -60005318 - MER5A DNA MER1_type -9 180 1 231 143 48 0 chr20 12149887 12149929 -60003953 - MIR SINE MIR -109 153 110 1097 178 198 31 chr20 12150847 12151105 -60002777 + AluJo SINE Alu 2 302 0 233 158 95 21 chr20 12151635 12151730 -60002152 + (TTTA)n Simple_repeat Simple_repeat 3 104 0 334 275 21 63 chr20 12151750 12151892 -60001990 - L1MEc LINE L1 -3961 2168 2033 3192 177 39 3 chr20 12152243 12153164 -60000718 - L1 LINE L1 -1059 5087 4084 22 35 0 0 chr20 12153264 12153293 -60000589 + AT_rich Low_complexity Low_complexity 1 29 0 383 224 0 0 chr20 12153362 12153447 -60000435 - L1MEc LINE L1 -4722 1588 1504 5400 142 13 11 chr20 12153454 12154378 -59999504 + Tigger1 DNA MER2_type 2 927 -1491 396 189 33 16 chr20 12154379 12154501 -59999381 + CT-rich Low_complexity Low_complexity 2 125 0 1035 177 154 71 chr20 12154501 12154767 -59999115 - AluJo SINE Alu -14 288 1 8399 129 32 18 chr20 12154768 12156199 -59997683 + Tigger1 DNA MER2_type 967 2418 0 355 294 106 6 chr20 12156207 12156387 -59997495 - L1MEc LINE L1 -4826 1484 1287 561 233 104 28 chr20 12156417 12156705 -59997177 - L1MEc LINE L1 -4915 1204 895 252 204 153 0 chr20 12158036 12158134 -59995748 - L1MC4 LINE L1 0 8042 7930 573 170 75 201 chr20 12158218 12158482 -59995400 - L1MC4 LINE L1 -130 7912 7721 2174 143 0 0 chr20 12158482 12158776 -59995106 + AluSx SINE Alu 2 295 -17 573 170 75 201 chr20 12158776 12158940 -59994942 - L1MC4 LINE L1 -321 7721 7538 1299 165 182 0 chr20 12158998 12159289 -59994593 - MER2 DNA MER2_type 0 344 1 216 182 0 0 chr20 12159390 12159434 -59994448 + (TA)n Simple_repeat Simple_repeat 2 45 0 2477 64 0 0 chr20 12159599 12159897 -59993985 + AluY SINE Alu 1 298 -13 558 258 59 48 chr20 12162039 12162225 -59991657 + MER58A DNA MER1_type 1 188 -36 634 134 34 8 chr20 12162250 12162369 -59991513 - L1MB1 LINE L1 0 6168 6047 1557 133 11 35 chr20 12162373 12162659 -59991223 - L1MB1 LINE L1 -12 6156 5878 187 200 44 0 chr20 12162749 12162794 -59991088 - L2 LINE L2 -583 2731 2685 691 282 158 11 chr20 12163980 12164246 -59989636 - MER115 DNA AcHobo -384 309 5 767 152 45 0 chr20 12164264 12164396 -59989486 - MER20 DNA MER1_type -23 196 59 236 61 0 0 chr20 12164396 12164429 -59989453 + L1PA3 LINE L1 6116 6148 -7 314 148 0 0 chr20 12164461 12164515 -59989367 - MER20 DNA MER1_type -163 56 3 2846 65 3 0 chr20 12164953 12165321 -59988561 + L1PA8 LINE L1 5804 6172 0 28 0 0 0 chr20 12165443 12165471 -59988411 + AT_rich Low_complexity Low_complexity 1 28 0 786 180 145 25 chr20 12165600 12165800 -59988082 + MER58A DNA MER1_type 1 224 0 2040 132 17 0 chr20 12167316 12167611 -59986271 + AluSq SINE Alu 1 300 -13 2030 129 0 7 chr20 12167641 12167960 -59985922 - AluSx SINE Alu 0 317 1 243 288 122 36 chr20 12167978 12168117 -59985765 + L2 LINE L2 3122 3272 0 199 323 32 21 chr20 12168227 12168320 -59985562 - MIR3 SINE MIR -11 197 104 552 126 11 21 chr20 12168560 12168655 -59985227 - MLT1A1 LTR MaLR 0 365 272 * 1271 198 27 45 chr20 12168647 12168980 -59984902 - MLT1A1 LTR MaLR -38 327 1 340 235 29 44 chr20 12169034 12169170 -59984712 + L1MC5 LINE L1 7336 7469 -492 2114 126 10 0 chr20 12169190 12169484 -59984398 + AluSx SINE Alu 1 297 -15 262 226 45 73 chr20 12169559 12169736 -59984146 + L1MC5 LINE L1 7609 7780 -181 233 152 22 0 chr20 12169770 12169816 -59984066 + (TTG)n Simple_repeat Simple_repeat 2 48 0 3573 152 94 61 chr20 12170159 12170815 -59983067 - MER4D LTR ERV1 0 903 209 1537 182 77 3 chr20 12170815 12171101 -59982781 + AluJo SINE Alu 1 307 -5 3573 152 94 61 chr20 12171101 12171315 -59982567 - MER4D LTR ERV1 -694 209 4 189 226 0 65 chr20 12171319 12171381 -59982501 + L3 LINE CR1 1209 1266 -311 286 128 0 0 chr20 12171497 12171544 -59982338 - MER41B LTR ERV1 0 635 589 * 2788 83 13 0 chr20 12171525 12171921 -59981961 - MER41A LTR ERV1 -153 401 1 521 266 152 6 chr20 12172149 12172307 -59981575 - MER5A DNA MER1_type 0 189 9 510 236 98 60 chr20 12172657 12173094 -59980788 + L1MC5 LINE L1 7390 7843 -118 1360 215 23 39 chr20 12173095 12173528 -59980354 - L1MD3 LINE L1 -1 7994 7569 244 250 21 21 chr20 12173529 12173625 -59980257 + L1MC5 LINE L1 7833 7928 -33 294 324 0 18 chr20 12173636 12173747 -59980135 - MIR SINE MIR -137 125 17 195 69 0 0 chr20 12174088 12174117 -59979765 + (TC)n Simple_repeat Simple_repeat 2 30 0 235 409 91 17 chr20 12174626 12174856 -59979026 - L2 LINE L2 -33 3239 2993 189 304 54 0 chr20 12176655 12176711 -59977171 + MIR3 SINE MIR 96 154 -54 301 304 40 0 chr20 12176891 12177016 -59976866 + MLT1I LTR MaLR 16 145 -264 226 242 32 42 chr20 12177185 12177280 -59976602 + MLT1I LTR MaLR 316 409 0 314 311 59 25 chr20 12178165 12178284 -59975598 + MIR3 SINE MIR 52 174 -34 834 247 69 100 chr20 12178480 12178901 -59974981 + MLT1J LTR MaLR 100 507 -4 462 250 32 16 chr20 12178916 12179040 -59974842 - MER5A DNA MER1_type -3 186 61 536 128 0 0 chr20 12179100 12179178 -59974704 - MER5A DNA MER1_type -111 78 1 485 129 11 0 chr20 12180316 12180409 -59973473 + CT-rich Low_complexity Low_complexity 3 96 0 870 165 142 52 chr20 12180446 12180713 -59973169 - L1ME2 LINE L1 -19 6145 5855 609 324 65 49 chr20 12181568 12182000 -59971882 + L2 LINE L2 2809 3247 -66 312 250 109 71 chr20 12182001 12182185 -59971697 - MLT1H LTR MaLR -1 548 358 242 189 0 19 chr20 12182258 12182311 -59971571 - MLT1I LTR MaLR -264 145 94 209 431 0 10 chr20 12182644 12182746 -59971136 - MER91A DNA MER1_type -94 102 2 2397 65 0 3 chr20 12183038 12183347 -59970535 - AluY SINE Alu -3 308 1 2197 193 42 2 chr20 12183610 12184020 -59969862 + MSTB LTR MaLR 1 426 0 183 205 0 0 chr20 12185056 12185095 -59968787 + (CAT)n Simple_repeat Simple_repeat 2 40 0 368 221 163 0 chr20 12185513 12185599 -59968283 - MER5A DNA MER1_type -83 106 7 224 206 10 52 chr20 12185934 12186031 -59967851 + (TTATA)n Simple_repeat Simple_repeat 5 97 0 1974 176 0 0 chr20 12186423 12186724 -59967158 - AluSx SINE Alu -7 305 5 1439 215 25 30 chr20 12187772 12188139 -59965743 - MLT1A1 LTR MaLR 0 365 1 508 302 88 14 chr20 12188261 12188476 -59965406 - MIR SINE MIR -15 247 17 1752 186 16 3 chr20 12188675 12188982 -59964900 - AluJo SINE Alu -1 311 1 186 43 0 0 chr20 12188997 12189020 -59964862 + (A)n Simple_repeat Simple_repeat 1 23 0 22 0 0 0 chr20 12189473 12189495 -59964387 + AT_rich Low_complexity Low_complexity 1 22 0 271 164 109 125 chr20 12190452 12190580 -59963302 + MLT1H LTR MaLR 424 549 0 258 273 43 58 chr20 12190946 12191085 -59962797 + Charlie8 DNA MER1_type 127 263 -2154 231 228 35 0 chr20 12191265 12191322 -59962560 - MER94 DNA DNA -1 133 75 977 177 108 100 chr20 12191363 12191642 -59962240 - MLT1G LTR MaLR -220 375 54 673 326 96 47 chr20 12191885 12192367 -59961515 - LTR67 LTR ERVL 0 557 45 2152 108 59 0 chr20 12192367 12192654 -59961228 + AluSx SINE Alu 1 304 -8 673 326 96 47 chr20 12192654 12192701 -59961181 - LTR67 LTR ERVL -512 45 2 1760 71 4 0 chr20 12192955 12193181 -59960701 - AluY SINE Alu 0 311 85 235 346 58 10 chr20 12193623 12193727 -59960155 - MIR SINE MIR -81 127 19 1252 260 74 44 chr20 12193770 12194297 -59959585 - MLT1H LTR MaLR -6 543 1 215 288 62 25 chr20 12194302 12194382 -59959500 - L2 LINE L2 0 3313 3231 300 320 72 0 chr20 12194976 12195129 -59958753 + L1MEd LINE L1 36 199 -5920 482 71 14 0 chr20 12195416 12195486 -59958396 - Alu SINE Alu -8 302 232 267 262 24 54 chr20 12195852 12196020 -59957862 + L1MEd LINE L1 865 1027 -5092 2486 167 5 32 chr20 12197325 12197763 -59956119 - MSTB LTR MaLR 0 426 1 25 31 0 0 chr20 12197772 12197804 -59956078 + AT_rich Low_complexity Low_complexity 1 32 0 691 341 77 10 chr20 12197825 12198124 -59955758 + MER115 DNA AcHobo 1 319 -374 464 330 43 13 chr20 12198326 12198559 -59955323 + LTR16C LTR ERVL 97 336 -155 217 229 0 0 chr20 12199168 12199216 -59954666 + L2 LINE L2 3262 3309 -4 266 227 50 42 chr20 12199781 12199900 -59953982 + MER104 DNA Tc2 4 123 -57 3808 160 73 21 chr20 12200352 12201190 -59952692 + L1MB7 LINE L1 5298 6178 -6 822 203 34 0 chr20 12201191 12201339 -59952543 + FRAM SINE Alu 1 145 -31 21 57 0 0 chr20 12201358 12201393 -59952489 + AT_rich Low_complexity Low_complexity 1 35 0 1453 172 0 111 chr20 12201775 12202158 -59951724 - AluJo SINE Alu 0 346 1 583 223 36 14 chr20 12202463 12202602 -59951280 + MLT1H LTR MaLR 122 263 -286 678 207 0 0 chr20 12202604 12202749 -59951133 - L1MB7 LINE L1 -251 5933 5789 445 295 50 54 chr20 12202760 12203038 -59950844 + MLT1H LTR MaLR 273 549 0 264 322 127 0 chr20 12203046 12203164 -59950718 - L2 LINE L2 -164 3108 2976 1052 252 49 31 chr20 12203404 12203900 -59949982 + MLT1G1 LTR MaLR 1 520 -70 7080 149 22 6 chr20 12203900 12206238 -59947644 + L1MA3 LINE L1 3920 6294 -11 301 227 0 34 chr20 12206250 12206338 -59947544 + MLT1F LTR MaLR 458 542 0 195 204 0 0 chr20 12206523 12206567 -59947315 + GA-rich Low_complexity Low_complexity 3 46 0 27 29 0 0 chr20 12208092 12208126 -59945756 + AT_rich Low_complexity Low_complexity 1 34 0 279 0 0 0 chr20 12210347 12210378 -59943504 + (CA)n Simple_repeat Simple_repeat 1 31 0 684 125 59 88 chr20 12210404 12210540 -59943342 + AluSq/x SINE Alu 3 134 -178 2093 150 3 6 chr20 12210541 12210894 -59942988 + AluSx SINE Alu 1 352 0 258 178 0 0 chr20 12211097 12211142 -59942740 - L1ME3A LINE L1 -60 6110 6066 214 338 12 0 chr20 12211659 12211739 -59942143 - MER5A DNA MER1_type -84 105 25 22 0 0 0 chr20 12212015 12212037 -59941845 + AT_rich Low_complexity Low_complexity 1 22 0 608 257 45 14 chr20 12212158 12212380 -59941502 + MER46C DNA MER2_type 109 337 -1 2952 110 14 49 chr20 12212428 12212920 -59940962 + L1PA16 LINE L1 5683 6157 -9 25 0 0 0 chr20 12212920 12212945 -59940937 + AT_rich Low_complexity Low_complexity 1 25 0 267 19 38 57 chr20 12212953 12213006 -59940876 + (TAAAAA)n Simple_repeat Simple_repeat 4 55 0 23 0 0 0 chr20 12213738 12213761 -59940121 + AT_rich Low_complexity Low_complexity 1 23 0 481 203 174 81 chr20 12214076 12214312 -59939570 - MER102a DNA MER1_type 0 330 73 1085 286 63 38 chr20 12214622 12215143 -59938739 + MLT1H LTR MaLR 3 536 -13 186 152 66 13 chr20 12216163 12216314 -59937568 + (TA)n Simple_repeat Simple_repeat 1 159 0 30 45 0 0 chr20 12216678 12216722 -59937160 + AT_rich Low_complexity Low_complexity 1 44 0 229 248 30 75 chr20 12216774 12216907 -59936975 + L1MC/D LINE L1 5575 5701 -2107 325 266 78 8 chr20 12217003 12217131 -59936751 - L1MC4 LINE L1 -87 7955 7819 386 245 130 74 chr20 12217154 12217423 -59936459 - L1MC4a LINE L1 -1344 6464 6181 294 29 0 0 chr20 12217446 12217481 -59936401 + (TG)n Simple_repeat Simple_repeat 2 36 0 820 188 6 0 chr20 12217503 12217684 -59936198 - L1MA7 LINE L1 -10 6281 6100 427 294 129 76 chr20 12218815 12219250 -59934632 + L1MEd LINE L1 266 723 -5396 26 0 0 0 chr20 12219518 12219544 -59934338 + AT_rich Low_complexity Low_complexity 1 26 0 358 341 23 0 chr20 12219706 12219838 -59934044 + MIR SINE MIR 84 218 -44 22 0 0 0 chr20 12220492 12220514 -59933368 + AT_rich Low_complexity Low_complexity 1 22 0 612 200 160 27 chr20 12220635 12220785 -59933097 - MER5A DNA MER1_type -18 171 2 356 287 66 16 chr20 12221390 12221512 -59932370 - MIR3 SINE MIR -29 179 52 592 279 87 98 chr20 12221529 12222048 -59931834 + MLT1H LTR MaLR 1 513 -36 392 99 0 14 chr20 12222442 12222513 -59931369 + L1PA2 LINE L1 6082 6151 -4 1927 142 0 7 chr20 12222773 12223061 -59930821 + AluSx SINE Alu 1 286 -26 367 197 0 26 chr20 12223739 12223815 -59930067 - MIR SINE MIR 0 262 189 381 231 39 0 chr20 12225114 12225218 -59928664 - Charlie8 DNA MER1_type -2251 166 59 601 313 20 15 chr20 12226024 12226222 -59927660 + MLT1J2 LTR MaLR 252 450 0 300 293 100 53 chr20 12227149 12227299 -59926583 - L2 LINE L2 0 3272 3116 818 235 16 5 chr20 12228085 12228272 -59925610 + MER5A DNA MER1_type 1 189 0 1100 246 14 14 chr20 12228627 12228903 -59924979 + LTR16C LTR ERVL 215 490 -1 24 0 0 0 chr20 12229643 12229667 -59924215 + AT_rich Low_complexity Low_complexity 1 24 0 248 227 0 0 chr20 12229914 12229958 -59923924 - Alu SINE Alu -178 124 81 2430 63 0 0 chr20 12229958 12230244 -59923638 - AluSc SINE Alu -10 299 14 270 167 0 0 chr20 12230244 12230286 -59923596 - Alu SINE Alu -255 44 3 305 274 247 68 chr20 12231484 12231674 -59922208 - MIR SINE MIR -10 252 29 242 218 359 0 chr20 12232224 12232351 -59921531 + MER5A DNA MER1_type 4 186 -3 180 0 0 0 chr20 12232774 12232794 -59921088 + (T)n Simple_repeat Simple_repeat 1 20 0 914 272 54 48 chr20 12233548 12234330 -59919552 + L1ME3A LINE L1 5068 5852 -318 1153 226 67 81 chr20 12234447 12234868 -59919014 + MLT1H LTR MaLR 135 549 0 411 200 234 11 chr20 12234893 12235068 -59918814 - L1ME3A LINE L1 -73 6097 5884 1887 123 0 4 chr20 12235069 12235338 -59918544 - AluSx SINE Alu -9 303 36 230 260 13 13 chr20 12235505 12235582 -59918300 + (CATATA)n Simple_repeat Simple_repeat 4 80 0 1138 229 134 25 chr20 12238051 12238453 -59915429 + L1ME3A LINE L1 5687 6132 -38 648 202 193 14 chr20 12239608 12239826 -59914056 - L1ME3A LINE L1 -227 5943 5687 210 156 0 0 chr20 12239962 12240007 -59913875 + A-rich Low_complexity Low_complexity 1 45 0 355 269 57 21 chr20 12240058 12240199 -59913683 - MER117 DNA MER1_type -46 151 6 465 264 31 21 chr20 12240481 12240674 -59913208 - Charlie8 DNA MER1_type -2152 265 71 1707 197 25 27 chr20 12240831 12241197 -59912685 - MLT1A1 LTR MaLR 0 365 1 385 226 123 123 chr20 12241629 12241679 -59912203 + MIR SINE MIR 4 53 -209 2416 78 0 0 chr20 12241679 12241974 -59911908 - AluSc SINE Alu -14 295 1 385 226 123 123 chr20 12241974 12241996 -59911886 + MIR SINE MIR 53 74 -188 2237 110 0 19 chr20 12241996 12242313 -59911569 - AluSx SINE Alu -1 311 1 385 226 123 123 chr20 12242313 12242482 -59911400 + MIR SINE MIR 73 246 -16 235 322 23 23 chr20 12242873 12242960 -59910922 + MER5A DNA MER1_type 8 94 -95 1486 233 149 67 chr20 12243113 12243502 -59910380 + MER21B LTR ERV1 1 357 -506 1247 184 66 63 chr20 12243502 12243866 -59910016 + MLT1A1 LTR MaLR 1 365 0 1486 233 149 67 chr20 12243866 12244175 -59909707 + MER21B LTR ERV1 357 756 -107 767 213 58 35 chr20 12244567 12244741 -59909141 + MER5B DNA MER1_type 1 178 0 270 322 34 39 chr20 12244797 12245002 -59908880 - MER102b DNA MER1_type -51 290 87 431 216 121 70 chr20 12245100 12245274 -59908608 + MER5A DNA MER1_type 6 189 0 2063 114 172 5 chr20 12245321 12245688 -59908194 + MSTA LTR MaLR 1 428 0 342 323 13 66 chr20 12245805 12246031 -59907851 - L1M4 LINE L1 -3421 2725 2512 356 215 98 78 chr20 12246032 12246100 -59907782 + L1M4 LINE L1 2298 2363 -3783 901 176 96 0 chr20 12246100 12246287 -59907595 + MER3 DNA MER1_type 1 205 -4 356 215 98 78 chr20 12246287 12246423 -59907459 + L1M4 LINE L1 2363 2506 -3640 2397 83 0 13 chr20 12246564 12246878 -59907004 - AluY SINE Alu -1 310 1 757 199 33 13 chr20 12247119 12247270 -59906612 - FRAM SINE Alu -12 154 1 873 254 144 22 chr20 12247272 12247736 -59906146 + Charlie7 DNA MER1_type 238 758 -1854 827 204 86 51 chr20 12247724 12248037 -59905845 + Charlie7 DNA MER1_type 2096 2419 -193 * 31 26 0 0 chr20 12248054 12248092 -59905790 + AT_rich Low_complexity Low_complexity 1 38 0 493 107 0 0 chr20 12248603 12248678 -59905204 + MADE1 DNA Mariner 6 80 0 1806 163 78 32 chr20 12248751 12249188 -59904694 + LTR2B LTR ERV1 34 490 0 31 26 0 0 chr20 12249433 12249471 -59904411 + AT_rich Low_complexity Low_complexity 1 38 0 2072 113 3 64 chr20 12250569 12250896 -59902986 + AluSq SINE Alu 1 307 -6 2147 107 31 0 chr20 12251660 12251949 -59901933 - AluSx SINE Alu -14 298 1 23 54 0 0 chr20 12251954 12251991 -59901891 + AT_rich Low_complexity Low_complexity 1 37 0 12470 194 42 10 chr20 12252206 12255235 -59898647 - ERVL-D LTR ERVL -2564 3200 2 287 146 0 0 chr20 12255236 12255284 -59898598 - MLT2D LTR ERVL 0 414 367 235 224 0 0 chr20 12255345 12255394 -59898488 - MLT2B1 LTR ERVL -471 49 1 985 222 112 102 chr20 12255422 12255895 -59897987 + MLT1H LTR MaLR 68 545 -4 782 289 116 34 chr20 12256423 12256581 -59897301 + L2 LINE L2 2830 2974 -339 1479 163 21 146 chr20 12256581 12256869 -59897013 + MLT2D LTR ERVL 1 209 -205 2271 107 20 0 chr20 12256869 12257168 -59896714 - AluSx SINE Alu -1 311 7 1479 163 21 146 chr20 12257168 12257352 -59896530 + MLT2D LTR ERVL 209 414 0 782 289 116 34 chr20 12257352 12257633 -59896249 + L2 LINE L2 2974 3305 -8 1014 237 137 60 chr20 12257915 12258209 -59895673 - MLT1D LTR MaLR -1 504 159 2784 93 0 3 chr20 12258209 12258573 -59895309 + THE1B LTR MaLR 2 364 0 1014 237 137 60 chr20 12258573 12258746 -59895136 - MLT1D LTR MaLR -346 159 1 292 173 0 0 chr20 12259640 12259692 -59894190 + MER66B LTR ERV1 296 347 -139 1015 49 28 0 chr20 12259692 12259836 -59894046 + (GAAA)n Simple_repeat Simple_repeat 1 148 0 1059 183 0 6 chr20 12259897 12260072 -59893810 + AluJo SINE Alu 122 295 -17 1308 134 5 14 chr20 12260313 12260522 -59893360 - U17 snRNA snRNA 0 207 1 451 284 226 26 chr20 12261227 12261533 -59892349 + L2 LINE L2 2608 2974 -340 253 281 90 24 chr20 12262556 12262723 -59891159 - L1MC4 LINE L1 -1 8041 7864 1209 229 36 0 chr20 12263703 12264008 -59889874 - MER58B DNA MER1_type 0 341 26 1007 198 10 10 chr20 12264021 12264228 -59889654 + MER3 DNA MER1_type 3 209 0 2516 65 0 3 chr20 12265183 12265491 -59888391 - AluY SINE Alu -2 309 3 1059 334 73 54 chr20 12265537 12266628 -59887254 + L2 LINE L2 2213 3312 -1 1499 177 22 87 chr20 12268171 12268284 -59885598 + MER2 DNA MER2_type 1 120 -224 2116 136 0 0 chr20 12268284 12268586 -59885296 + AluSx SINE Alu 1 302 -10 1499 177 22 87 chr20 12268586 12268840 -59885042 + MER2 DNA MER2_type 120 344 0 391 284 10 29 chr20 12269307 12269409 -59884473 + L2 LINE L2 3210 3309 -4 244 310 267 26 chr20 12269507 12269810 -59884072 - L2 LINE L2 0 3313 2938 537 16 0 0 chr20 12270148 12270210 -59883672 + (TA)n Simple_repeat Simple_repeat 2 63 0 2321 97 3 0 chr20 12270210 12270508 -59883374 - AluSg SINE Alu -11 299 1 24 32 0 0 chr20 12270508 12270539 -59883343 + AT_rich Low_complexity Low_complexity 1 31 0 1142 291 42 14 chr20 12270773 12271411 -59882471 - L1ME3A LINE L1 -217 5936 5281 258 200 50 12 chr20 12271426 12271506 -59882376 + (TATAA)n Simple_repeat Simple_repeat 4 86 0 394 141 106 0 chr20 12271625 12271710 -59882172 - MER2 DNA MER2_type -134 211 118 29 28 0 0 chr20 12271722 12271758 -59882124 + AT_rich Low_complexity Low_complexity 1 36 0 266 272 0 2 chr20 12271889 12271984 -59881898 + L1ME LINE L1 5489 5579 -542 373 219 10 42 chr20 12271991 12272087 -59881795 - MER2 DNA MER2_type -249 96 4 847 289 72 26 chr20 12272132 12272746 -59881136 - L1ME3A LINE L1 -942 5187 4538 1715 75 0 9 chr20 12272746 12272959 -59880923 - AluSg/x SINE Alu -12 298 88 847 289 72 26 chr20 12272959 12273006 -59880876 - L1ME3A LINE L1 -1591 4538 4495 24 0 0 0 chr20 12273113 12273137 -59880745 + AT_rich Low_complexity Low_complexity 1 24 0 599 271 114 14 chr20 12273625 12274065 -59879817 - L1ME3A LINE L1 -5009 1110 627 343 250 60 20 chr20 12274134 12274234 -59879648 - HAL1 LINE L1 -1074 1433 1330 275 268 12 24 chr20 12274246 12274328 -59879554 - L1ME3A LINE L1 -5594 525 445 748 267 84 5 chr20 12275145 12275512 -59878370 - HAL1 LINE L1 -856 1651 1256 226 250 33 0 chr20 12276824 12276884 -59876998 + MIR3 SINE MIR 108 169 -39 297 0 0 0 chr20 12277096 12277129 -59876753 + (CA)n Simple_repeat Simple_repeat 2 34 0 363 154 0 0 chr20 12277143 12277208 -59876674 + (TGGA)n Simple_repeat Simple_repeat 4 68 0 1830 163 14 7 chr20 12277864 12278159 -59875723 - AluJo SINE Alu -15 297 1 388 161 0 0 chr20 12280208 12280270 -59873612 + L1PA15-16 LINE L1 1512 1573 -5276 581 295 106 44 chr20 12280351 12280717 -59873165 + L2 LINE L2 1709 2112 -1202 1889 156 0 29 chr20 12280717 12281025 -59872857 - AluJb SINE Alu -13 299 1 581 295 106 44 chr20 12281025 12281132 -59872750 + L2 LINE L2 2112 2211 -1103 189 264 28 69 chr20 12281399 12281471 -59872411 + MIR SINE MIR 64 132 -76 460 254 41 24 chr20 12282112 12282281 -59871601 + MER63B DNA MER1_type 1 172 -264 1606 163 10 43 chr20 12282399 12282699 -59871183 + AluJb SINE Alu 1 290 -22 810 169 21 11 chr20 12282724 12282913 -59870969 + MER63B DNA MER1_type 245 435 0 1360 201 42 77 chr20 12283153 12283555 -59870327 + MLT1B LTR MaLR 3 390 0 190 319 88 11 chr20 12283649 12283740 -59870142 + L2 LINE L2 2995 3092 -180 792 181 6 33 chr20 12283838 12284020 -59869862 - MER3 DNA MER1_type -78 131 2 331 238 0 0 chr20 12284066 12284129 -59869753 + L2 LINE L2 3246 3308 -5 344 299 90 24 chr20 12284645 12284812 -59869070 - L3b LINE CR1 -122 1461 1284 183 197 82 66 chr20 12284907 12284968 -59868914 + L2 LINE L2 3251 3312 -1 208 176 0 0 chr20 12285812 12285846 -59868036 - MIR SINE MIR -116 146 113 311 285 162 8 chr20 12285957 12286136 -59867746 + MIR SINE MIR 42 262 0 2341 82 3 38 chr20 12286682 12286999 -59866883 - AluSq SINE Alu -7 306 1 2139 99 3 0 chr20 12287614 12287934 -59865948 + AluSp SINE Alu 1 321 0 468 258 151 19 chr20 12288397 12288556 -59865326 + MER5A DNA MER1_type 10 189 0 950 262 100 57 chr20 12290116 12290834 -59863048 - L2 LINE L2 -2 3311 2559 232 231 0 0 chr20 12291215 12291267 -59862615 + (TG)n Simple_repeat Simple_repeat 1 52 0 1895 161 9 9 chr20 12291669 12292004 -59861878 - MER2 DNA MER2_type -7 338 4 496 237 44 25 chr20 12292842 12293111 -59860771 + MLT2F LTR ERVL 1 321 -342 264 59 0 0 chr20 12293111 12293145 -59860737 + (TG)n Simple_repeat Simple_repeat 2 35 0 496 237 44 25 chr20 12293145 12293179 -59860703 + MLT2F LTR ERVL 321 353 -310 305 250 169 12 chr20 12293207 12293367 -59860515 + MLT2F LTR ERVL 479 663 0 1932 161 0 10 chr20 12293496 12293795 -59860087 - AluSx SINE Alu -16 296 1 229 299 65 55 chr20 12294063 12294388 -59859494 + L1MEd LINE L1 895 1222 -4897 365 241 69 28 chr20 12294515 12294660 -59859222 + L1MEd LINE L1 1379 1529 -4600 24 0 0 0 chr20 12295276 12295300 -59858582 + AT_rich Low_complexity Low_complexity 1 24 0 1485 102 5 14 chr20 12295802 12296018 -59857864 - AluSg/x SINE Alu -3 309 96 8434 59 6 9 chr20 12297241 12298316 -59855566 + MER11C LTR ERVK 1 1071 0 23 0 0 0 chr20 12298928 12298951 -59854931 + AT_rich Low_complexity Low_complexity 1 23 0 934 307 89 20 chr20 12299256 12299809 -59854073 + MLT1L LTR MaLR 20 610 -5 26 50 0 0 chr20 12300512 12300552 -59853330 + AT_rich Low_complexity Low_complexity 1 40 0 410 280 5 11 chr20 12301166 12301278 -59852604 + MER5B DNA MER1_type 49 173 -16 201 253 103 46 chr20 12301984 12302071 -59851811 - L2 LINE L2 -26 3246 3155 1635 186 0 20 chr20 12302293 12302599 -59851283 - AluJo SINE Alu 0 312 13 195 414 131 0 chr20 12303942 12304041 -59849841 + L2 LINE L2 3160 3271 -1 2128 153 12 3 chr20 12304311 12304651 -59849231 + MER61A LTR ERV1 1 343 0 500 272 39 53 chr20 12304664 12304703 -59849179 - MIR SINE MIR -26 236 198 2244 94 3 50 chr20 12304703 12305022 -59848860 + AluSq SINE Alu 1 304 -9 500 272 39 53 chr20 12305022 12305188 -59848694 - MIR SINE MIR -64 198 34 456 228 87 40 chr20 12305582 12305731 -59848151 + MER5B DNA MER1_type 14 169 -9 276 254 0 0 chr20 12306218 12306273 -59847609 - L2 LINE L2 -8 3305 3251 598 237 116 0 chr20 12306302 12306466 -59847416 + MER5A DNA MER1_type 4 189 0 2091 132 0 0 chr20 12307130 12307426 -59846456 - AluSx SINE Alu -16 296 1 21 57 0 0 chr20 12307526 12307561 -59846321 + AT_rich Low_complexity Low_complexity 1 35 0 1490 181 7 18 chr20 12309041 12309322 -59844560 + AluJb SINE Alu 31 308 -4 277 241 107 62 chr20 12309356 12309468 -59844414 - L2 LINE L2 -3 3269 3153 2264 114 19 30 chr20 12309731 12310099 -59843783 + THE1B LTR MaLR 1 364 0 313 257 88 0 chr20 12310109 12310245 -59843637 + L1ME4a LINE L1 5756 5903 -218 492 32 0 0 chr20 12310258 12310320 -59843562 + (TG)n Simple_repeat Simple_repeat 1 62 0 278 304 18 27 chr20 12310801 12310913 -59842969 - MIR SINE MIR -56 206 96 198 103 0 0 chr20 12311236 12311265 -59842617 + (CAAAG)n Simple_repeat Simple_repeat 3 31 0 354 281 6 30 chr20 12311691 12311858 -59842024 + Charlie4 DNA MER1_type 20 182 -1779 411 289 211 7 chr20 12311975 12312127 -59841755 - MER5A DNA MER1_type -3 186 4 252 0 0 0 chr20 12312171 12312199 -59841683 + (T)n Simple_repeat Simple_repeat 1 28 0 186 380 28 0 chr20 12312413 12312484 -59841398 + L2 LINE L2 3186 3258 -14 1740 135 117 30 chr20 12313622 12313955 -59839927 + THE1B LTR MaLR 1 362 -2 2294 113 0 0 chr20 12313970 12314270 -59839612 - AluSx SINE Alu -12 300 1 876 276 114 48 chr20 12314422 12315036 -59838846 + L2 LINE L2 2676 3313 0 594 162 80 14 chr20 12315039 12315196 -59838686 + L1MB8 LINE L1 6010 6176 -2 743 314 13 8 chr20 12315329 12315565 -59838317 + MIR SINE MIR 10 246 -16 201 287 96 52 chr20 12315773 12315888 -59837994 - MER5A DNA MER1_type 0 189 70 * 400 278 119 0 chr20 12315879 12316005 -59837877 + MER5A DNA MER1_type 47 187 -2 200 176 0 0 chr20 12316360 12316394 -59837488 - L2 LINE L2 -13 3300 3267 207 0 0 0 chr20 12316610 12316633 -59837249 + (A)n Simple_repeat Simple_repeat 1 23 0 2124 144 0 0 chr20 12317717 12318015 -59835867 - AluSx SINE Alu -14 298 1 2461 88 10 0 chr20 12318748 12319056 -59834826 - AluSp SINE Alu -2 311 1 1595 156 25 32 chr20 12319523 12319805 -59834077 + AluJb SINE Alu 1 280 -32 309 26 0 0 chr20 12319807 12319845 -59834037 + (GGAA)n Simple_repeat Simple_repeat 3 40 0 1153 152 39 76 chr20 12320304 12320634 -59833248 - MER33 DNA MER1_type -2 322 5 562 124 10 10 chr20 12320806 12320903 -59832979 + MER4A LTR ERV1 2 98 -566 1491 117 168 91 chr20 12320903 12321278 -59832604 + MER4A LTR ERV1 261 664 0 327 361 47 24 chr20 12321296 12321455 -59832427 + MIR3 SINE MIR 35 200 -8 2611 53 0 0 chr20 12321455 12321759 -59832123 + AluY SINE Alu 1 304 -7 35 24 0 0 chr20 12322411 12322453 -59831429 + AT_rich Low_complexity Low_complexity 1 42 0 364 331 15 0 chr20 12323025 12323158 -59830724 + MIR SINE MIR 84 218 -44 1549 209 55 44 chr20 12323163 12323506 -59830376 + MLT1C LTR MaLR 6 358 -109 1882 120 49 0 chr20 12323506 12323805 -59830077 - AluSg SINE Alu 0 312 1 1549 209 55 44 chr20 12323805 12323915 -59829967 + MLT1C LTR MaLR 358 465 -2 593 275 12 18 chr20 12324394 12324565 -59829317 + MER5A DNA MER1_type 20 189 0 492 270 8 0 chr20 12324710 12324836 -59829046 + L2 LINE L2 2527 2653 -661 255 198 247 0 chr20 12324855 12324936 -59828946 + MER5A DNA MER1_type 9 109 -80 681 311 115 26 chr20 12324990 12325581 -59828301 + L2 LINE L2 2666 3310 -3 1960 130 32 0 chr20 12325728 12326012 -59827870 + AluSx SINE Alu 1 293 -19 348 261 84 8 chr20 12326669 12326788 -59827094 + MIR SINE MIR 8 135 -127 1342 221 91 19 chr20 12326799 12327216 -59826666 - LTR16A1 LTR ERVL -2 455 9 262 283 11 33 chr20 12327220 12327312 -59826570 + MIR SINE MIR 140 229 -33 522 307 74 6 chr20 12327334 12327497 -59826385 + MER91B DNA MER1_type 15 188 -2 1966 138 0 10 chr20 12327529 12327825 -59826057 - AluSx SINE Alu -19 293 1 2074 101 10 49 chr20 12327888 12328021 -59825861 + AluSx SINE Alu 1 138 -174 2013 124 3 7 chr20 12328021 12328328 -59825554 + AluSx SINE Alu 1 306 0 2074 101 10 49 chr20 12328328 12328501 -59825381 + AluSx SINE Alu 138 296 -16 365 296 47 12 chr20 12328522 12328691 -59825191 + MER104 DNA MER2_type 4 178 -2 2127 92 7 10 chr20 12329485 12329780 -59824102 - AluSp SINE Alu -19 294 1 991 73 0 0 chr20 12329817 12329940 -59823942 + AluSq/x SINE Alu 5 127 -185 1788 118 4 0 chr20 12329940 12330185 -59823697 + AluSx SINE Alu 52 297 -15 1193 285 53 9 chr20 12330249 12330716 -59823166 - L1ME3A LINE L1 -6 6164 5677 239 237 40 0 chr20 12330733 12330809 -59823073 - L1ME3A LINE L1 -508 5613 5535 2077 140 3 10 chr20 12331502 12331810 -59822072 + AluSq SINE Alu 1 306 -7 1882 99 4 0 chr20 12331946 12332219 -59821663 + AluSp SINE Alu 40 313 0 2277 230 58 16 chr20 12332230 12332908 -59820974 + L1MC4a LINE L1 7099 7804 -4 2099 134 3 3 chr20 12333109 12333408 -59820474 - AluSx SINE Alu -13 299 1 202 363 110 7 chr20 12333617 12333763 -59820119 - L2 LINE L2 -8 3264 3104 345 47 0 0 chr20 12333811 12333854 -59820028 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 456 335 45 29 chr20 12333884 12334129 -59819753 + MIR SINE MIR 5 253 -9 289 267 172 36 chr20 12335071 12335292 -59818590 + MLT1H LTR MaLR 296 546 -3 905 229 8 68 chr20 12335296 12335532 -59818350 + MIR SINE MIR 15 236 -26 2270 112 62 69 chr20 12335551 12335999 -59817883 + MER65A LTR ERV1 1 445 0 217 242 30 61 chr20 12336088 12336154 -59817728 + L2 LINE L2 3206 3269 -3 233 347 147 6 chr20 12336813 12336983 -59816899 + Charlie8 DNA MER1_type 2 195 -2222 3080 123 34 38 chr20 12338313 12338817 -59815065 - MER1A DNA MER1_type 0 529 28 2432 88 3 0 chr20 12338898 12339195 -59814687 - AluSx SINE Alu -14 298 1 180 188 0 0 chr20 12339390 12339422 -59814460 - MIR SINE MIR -150 112 81 2458 48 0 29 chr20 12340463 12340773 -59813109 + AluY SINE Alu 1 301 -10 301 287 93 0 chr20 12341198 12341306 -59812576 + L1MC4 LINE L1 7924 8041 -1 250 331 71 31 chr20 12341640 12341767 -59812115 + L2 LINE L2 3182 3313 0 198 71 0 0 chr20 12341874 12341902 -59811980 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 911 201 34 0 chr20 12342423 12342602 -59811280 + MER5A DNA MER1_type 1 185 -4 405 257 221 7 chr20 12342609 12342745 -59811137 + MER5A DNA MER1_type 10 174 -15 877 261 11 14 chr20 12342758 12343042 -59810840 - L1MA9 LINE L1 -38 6274 5992 192 330 22 33 chr20 12343323 12343414 -59810468 + MIR SINE MIR 58 147 -115 194 0 39 0 chr20 12343910 12343936 -59809946 + (TTTTA)n Simple_repeat Simple_repeat 2 28 0 853 199 26 0 chr20 12343939 12344090 -59809792 - AluJb SINE Alu -30 282 128 463 235 10 0 chr20 12344713 12344815 -59809067 + MER5A DNA MER1_type 4 106 -83 780 295 12 52 chr20 12344873 12345062 -59808820 + MIR SINE MIR 22 200 -62 706 204 8 0 chr20 12345062 12345194 -59808688 + FLAM_C SINE Alu 1 133 0 780 295 12 52 chr20 12345194 12345255 -59808627 + MIR SINE MIR 200 262 0 305 279 102 14 chr20 12345444 12345475 -59808407 + L1ME4a LINE L1 5926 5953 -168 2231 116 0 0 chr20 12345475 12345777 -59808105 + AluSx SINE Alu 1 302 -10 305 279 102 14 chr20 12345777 12345892 -59807990 + L1ME4a LINE L1 5953 6085 -36 463 0 48 0 chr20 12347038 12347100 -59806782 + (TTTTA)n Simple_repeat Simple_repeat 2 66 0 796 201 28 0 chr20 12347103 12347247 -59806635 - AluJo SINE Alu -30 282 135 680 156 55 0 chr20 12347523 12347651 -59806231 - L1PA15 LINE L1 0 6165 6031 762 210 22 49 chr20 12348040 12348264 -59805618 - LTR16A1 LTR ERVL -8 449 232 2913 139 15 19 chr20 12348293 12348826 -59805056 + L1 LINE L1 3796 4326 -1820 360 123 14 27 chr20 12348826 12348896 -59804986 + L1MA3 LINE L1 6233 6304 -1 431 238 123 46 chr20 12348910 12349234 -59804648 + L1ME4a LINE L1 5743 6091 -30 336 214 27 0 chr20 12350292 12350404 -59803478 + (TCCA)n Simple_repeat Simple_repeat 3 117 0 939 134 0 0 chr20 12351697 12351824 -59802058 - AluJo SINE Alu -185 127 1 2105 128 7 7 chr20 12352533 12352838 -59801044 - AluSx SINE Alu -7 305 1 817 38 0 9 chr20 12353146 12353251 -59800631 - L1PA3 LINE L1 0 6155 6052 1655 0 0 0 chr20 12353251 12353443 -59800439 + L1P1 LINE L1 5385 5576 -579 316 305 6 85 chr20 12353709 12353873 -59800009 - MIR SINE MIR -6 256 106 1656 143 109 37 chr20 12354850 12355200 -59798682 + THE1C LTR MaLR 1 375 0 250 167 0 28 chr20 12357113 12357185 -59796697 + (TA)n Simple_repeat Simple_repeat 2 71 0 2465 44 0 47 chr20 12357546 12357867 -59796015 - AluY SINE Alu -5 306 1 387 0 0 0 chr20 12357879 12357922 -59795960 + (TTA)n Simple_repeat Simple_repeat 3 45 0 1549 48 0 0 chr20 12357922 12358109 -59795773 - L1PA3 LINE L1 -18 6137 5951 271 56 0 0 chr20 12358109 12358145 -59795737 + L1PA3 LINE L1 5921 5956 -199 362 125 89 30 chr20 12358796 12358964 -59794918 + (TA)n Simple_repeat Simple_repeat 2 179 0 22 88 0 0 chr20 12358969 12359026 -59794856 + AT_rich Low_complexity Low_complexity 1 57 0 258 121 0 72 chr20 12359097 12359180 -59794702 + (TATAA)n Simple_repeat Simple_repeat 3 79 0 402 250 139 49 chr20 12359187 12359531 -59794351 - L1ME LINE L1 -342 5779 5405 431 316 86 42 chr20 12359870 12360275 -59793607 + L1ME LINE L1 3692 4107 -2039 * 950 201 67 4 chr20 12360270 12360509 -59793373 + L1MA4 LINE L1 6045 6298 -2 21 57 0 0 chr20 12360812 12360847 -59793035 + AT_rich Low_complexity Low_complexity 1 35 0 24 0 0 0 chr20 12360861 12360885 -59792997 + AT_rich Low_complexity Low_complexity 1 24 0 304 293 81 72 chr20 12360951 12361296 -59792586 + L1ME LINE L1 4487 4834 -1312 427 310 46 43 chr20 12361622 12361970 -59791912 + L1ME LINE L1 5312 5660 -461 21 71 0 0 chr20 12362067 12362109 -59791773 + AT_rich Low_complexity Low_complexity 1 42 0 697 272 24 0 chr20 12363389 12363558 -59790324 + MIR SINE MIR 28 200 -62 188 309 86 0 chr20 12363964 12364045 -59789837 - MIR SINE MIR -57 205 118 199 329 26 0 chr20 12364881 12364957 -59788925 - MIR3 SINE MIR -2 206 129 1652 133 91 34 chr20 12364962 12365315 -59788567 + THE1C LTR MaLR 1 373 -2 1261 107 51 23 chr20 12367474 12367689 -59786193 - L1PA13 LINE L1 -3 6160 5940 922 234 21 30 chr20 12367887 12368122 -59785760 + MIR SINE MIR 3 235 -27 946 197 0 75 chr20 12368688 12368901 -59784981 - AluJo SINE Alu -30 282 86 23 0 0 0 chr20 12370838 12370861 -59783021 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr20 12370875 12370899 -59782983 + AT_rich Low_complexity Low_complexity 1 24 0 2178 241 43 23 chr20 12371882 12372484 -59781398 - L1ME3A LINE L1 -1 6169 5556 1876 188 85 25 chr20 12372939 12373412 -59780470 + MLT1D LTR MaLR 3 503 -2 1815 115 9 96 chr20 12373475 12373798 -59780084 - AluSx SINE Alu -17 295 1 212 259 0 17 chr20 12375905 12375963 -59777919 + GA-rich Low_complexity Low_complexity 2 58 0 199 200 32 116 chr20 12376204 12376299 -59777583 + MIR SINE MIR 132 218 -44 673 184 177 19 chr20 12377431 12377589 -59776293 + MER5A DNA MER1_type 7 189 0 239 316 58 29 chr20 12377878 12378017 -59775865 - MER5A DNA MER1_type -29 160 18 377 209 0 44 chr20 12378092 12378183 -59775699 - MER5A DNA MER1_type -97 92 6 1993 128 33 7 chr20 12378224 12378528 -59775354 + AluSx SINE Alu 1 312 0 193 346 13 13 chr20 12379000 12379078 -59774804 - MIR SINE MIR -125 137 60 287 313 88 27 chr20 12379121 12379268 -59774614 + MER5A DNA MER1_type 12 167 -22 * 296 323 65 0 chr20 12379146 12379270 -59774612 - MER5A DNA MER1_type -26 163 32 2070 108 20 23 chr20 12379377 12379682 -59774200 - AluSc SINE Alu -1 308 5 434 182 196 28 chr20 12379804 12379947 -59773935 + MER117 DNA MER1_type 1 167 -30 988 265 8 36 chr20 12380502 12380755 -59773127 + MIR SINE MIR 15 260 -2 2222 91 3 0 chr20 12380919 12381204 -59772678 + AluSp SINE Alu 27 312 -1 2346 129 61 24 chr20 12381255 12381667 -59772215 + MSTA LTR MaLR 1 427 -1 1624 183 11 38 chr20 12383490 12383856 -59770026 - L1MB8 LINE L1 0 6178 5823 328 304 112 32 chr20 12383929 12384330 -59769552 - L1MB8 LINE L1 -337 5784 5352 572 253 71 13 chr20 12384695 12384849 -59769033 + MIR SINE MIR 22 184 -78 199 264 103 69 chr20 12384902 12384989 -59768893 - MIR SINE MIR -82 126 37 1240 312 112 18 chr20 12385170 12385322 -59768560 + L2 LINE L2 2440 2576 -737 582 333 79 11 chr20 12385322 12385701 -59768181 + MLT1I LTR MaLR 1 405 -4 1240 312 112 18 chr20 12385701 12386336 -59767546 + L2 LINE L2 2576 3313 0 497 174 37 64 chr20 12386411 12386519 -59767363 - MER58A DNA MER1_type 0 224 120 2076 206 60 27 chr20 12386519 12386970 -59766912 + MLT2B1 LTR ERVL 2 467 -53 613 264 0 0 chr20 12386997 12387122 -59766760 - MER58A DNA MER1_type 0 125 1 1977 157 3 3 chr20 12387330 12387635 -59766247 - AluSx SINE Alu -7 305 1 624 277 36 51 chr20 12388401 12388654 -59765228 - MIR SINE MIR -6 256 8 210 246 33 0 chr20 12388656 12388717 -59765165 + CT-rich Low_complexity Low_complexity 6 68 0 1222 248 40 83 chr20 12389959 12390488 -59763394 - L2 LINE L2 -4 3309 2804 699 245 74 0 chr20 12390587 12390750 -59763132 - MER96 DNA MER1_type 0 175 1 702 333 95 24 chr20 12392024 12392444 -59761438 + L2 LINE L2 340 789 -2525 509 316 25 22 chr20 12392507 12392830 -59761052 + MER115 DNA AcHobo 17 435 -258 * 1374 244 71 3 chr20 12392828 12393164 -59760718 + MER90 LTR ERV1 256 614 0 254 262 24 71 chr20 12393447 12393573 -59760309 + L1ME3 LINE L1 5966 6085 -77 449 262 69 50 chr20 12394297 12394499 -59759383 - MIR SINE MIR 0 262 57 21 0 0 0 chr20 12394653 12394674 -59759208 + AT_rich Low_complexity Low_complexity 1 21 0 2353 74 0 0 chr20 12394674 12394981 -59758901 + AluY SINE Alu 1 307 0 2798 200 48 18 chr20 12394982 12395708 -59758174 + L1M4 LINE L1 4421 5168 -978 1704 203 0 0 chr20 12395996 12396287 -59757595 - AluJo SINE Alu -21 291 1 185 344 122 0 chr20 12398511 12398601 -59755281 - L2 LINE L2 -38 3234 3134 591 303 143 65 chr20 12398619 12399177 -59754705 + MLT1L LTR MaLR 9 610 -5 25 65 0 0 chr20 12400369 12400415 -59753467 + AT_rich Low_complexity Low_complexity 1 46 0 1892 208 52 92 chr20 12400770 12401486 -59752396 + LTR8 LTR ERV1 5 691 0 6374 172 9 8 chr20 12402168 12404354 -59749528 + L1PB1 LINE L1 3958 6143 -8 26 0 0 0 chr20 12404354 12404380 -59749502 + AT_rich Low_complexity Low_complexity 1 26 0 1901 154 4 0 chr20 12404385 12404687 -59749195 + AluJo SINE Alu 4 306 0 667 213 59 95 chr20 12404794 12405015 -59748867 + L1MC4 LINE L1 6687 6992 -1050 377 239 97 9 chr20 12405480 12405593 -59748289 + Charlie4 DNA MER1_type 43 165 -1796 468 186 76 0 chr20 12405684 12405802 -59748080 + Charlie4 DNA MER1_type 1806 1932 -29 2052 111 0 42 chr20 12405951 12406257 -59747625 - AluSq SINE Alu -12 301 9 298 198 0 47 chr20 12407064 12407170 -59746712 + L1ME4a LINE L1 5987 6087 -34 1933 88 15 4 chr20 12407173 12407436 -59746446 + AluSx SINE Alu 21 286 -26 342 0 0 0 chr20 12407439 12407477 -59746405 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 2440 68 0 3 chr20 12407523 12407817 -59746065 + AluY SINE Alu 1 293 -18 387 117 91 0 chr20 12408061 12408138 -59745744 - L1MA9 LINE L1 0 6312 6229 815 275 54 85 chr20 12408323 12408971 -59744911 - L1ME4a LINE L1 -3 6118 5491 1264 160 0 5 chr20 12409275 12409488 -59744394 - AluJo SINE Alu -100 212 1 208 360 132 0 chr20 12409568 12409682 -59744200 - L2 LINE L2 -1 3271 3143 279 273 13 0 chr20 12409903 12409980 -59743902 + MER116 DNA Mariner 1 78 -2 383 281 156 6 chr20 12410283 12410450 -59743432 + MER117 DNA MER1_type 1 192 -5 347 0 23 0 chr20 12410577 12410620 -59743262 + (TA)n Simple_repeat Simple_repeat 1 44 0 314 319 0 0 chr20 12410629 12410720 -59743162 - L1MC4 LINE L1 -1339 6703 6613 378 184 13 0 chr20 12410777 12410853 -59743029 - LTR37B LTR ERV1 -183 285 209 26 30 0 0 chr20 12410946 12410979 -59742903 + AT_rich Low_complexity Low_complexity 1 33 0 205 260 156 52 chr20 12411657 12411753 -59742129 + L3 LINE CR1 1472 1577 0 1121 277 103 14 chr20 12413229 12413735 -59740147 - HAL1 LINE L1 -105 2402 1852 2443 260 107 72 chr20 12413736 12414293 -59739589 - HAL1 LINE L1 -710 1797 1260 2101 93 3 40 chr20 12414293 12414595 -59739287 - AluSp SINE Alu -22 291 1 2443 260 107 72 chr20 12414595 12415320 -59738562 - HAL1 LINE L1 -1247 1260 438 1932 144 30 0 chr20 12415320 12415619 -59738263 - AluSx SINE Alu -4 308 1 2443 260 107 72 chr20 12415619 12416072 -59737810 - HAL1 LINE L1 -2069 438 2 451 257 45 54 chr20 12417377 12417599 -59736283 + L2 LINE L2 3013 3232 -81 764 233 48 15 chr20 12417619 12417825 -59736057 - LTR16C LTR ERVL -212 279 67 347 259 47 0 chr20 12417835 12417920 -59735962 + L2 LINE L2 3223 3311 -2 2227 106 0 0 chr20 12418550 12418877 -59735005 - AluSx SINE Alu 0 327 1 669 235 18 99 chr20 12419416 12419637 -59734245 - MIR SINE MIR -58 204 2 316 304 22 29 chr20 12419741 12419879 -59734003 - MIR SINE MIR -83 179 43 242 323 78 46 chr20 12421347 12421564 -59732318 - MIR SINE MIR 0 262 40 225 119 24 24 chr20 12422295 12422337 -59731545 + MIR SINE MIR 119 160 -102 229 182 68 0 chr20 12422477 12422521 -59731361 + L2 LINE L2 3267 3313 0 471 247 39 19 chr20 12423051 12423205 -59730677 + LTR16C LTR ERVL 335 491 0 1089 247 22 0 chr20 12425361 12425632 -59728250 - LTR16C LTR ERVL 0 491 215 293 239 45 0 chr20 12425780 12425847 -59728035 - MIR3 SINE MIR -50 158 89 1040 291 73 30 chr20 12426627 12427121 -59726761 + MLT1K LTR MaLR 73 587 -1 337 231 50 16 chr20 12428442 12428563 -59725319 + (TATATG)n Simple_repeat Simple_repeat 2 126 0 268 271 8 4 chr20 12428949 12429067 -59724815 + MER5A DNA MER1_type 15 183 -6 392 171 39 50 chr20 12429077 12429258 -59724624 + (TTATA)n Simple_repeat Simple_repeat 1 179 0 414 208 46 6 chr20 12429286 12429459 -59724423 + (TA)n Simple_repeat Simple_repeat 1 180 0 366 161 81 0 chr20 12429445 12429594 -59724288 + (TATAA)n Simple_repeat Simple_repeat 1 161 0 * 227 187 41 0 chr20 12429594 12429765 -59724117 + (TA)n Simple_repeat Simple_repeat 1 178 0 307 337 82 25 chr20 12430621 12430817 -59723065 - MIR SINE MIR -3 259 53 30 0 0 0 chr20 12430930 12430960 -59722922 + AT_rich Low_complexity Low_complexity 1 30 0 2222 142 0 0 chr20 12431686 12431995 -59721887 - AluSx SINE Alu -1 311 3 206 247 221 26 chr20 12434013 12434090 -59719792 - MIR3 SINE MIR -25 183 92 365 289 33 8 chr20 12434555 12434676 -59719206 + CT-rich Low_complexity Low_complexity 6 129 0 191 323 0 0 chr20 12435415 12435477 -59718405 + L2 LINE L2 3210 3271 -1 245 275 143 11 chr20 12436305 12436396 -59717486 + L2 LINE L2 3211 3313 0 340 279 143 19 chr20 12437017 12437275 -59716607 + L2 LINE L2 3019 3308 -5 456 309 33 13 chr20 12437693 12437845 -59716037 - MIR SINE MIR -21 241 87 22 35 0 0 chr20 12438051 12438080 -59715802 + AT_rich Low_complexity Low_complexity 1 29 0 22 99 0 0 chr20 12438411 12438482 -59715400 + AT_rich Low_complexity Low_complexity 1 71 0 213 337 10 40 chr20 12439829 12439930 -59713952 + L2 LINE L2 2883 2980 -292 364 276 135 29 chr20 12439949 12440119 -59713763 + L2 LINE L2 3117 3304 -9 280 209 107 45 chr20 12440830 12441007 -59712875 - Charlie7 DNA MER1_type -8 2604 2417 * 389 210 91 35 chr20 12441000 12441035 -59712847 - Charlie7 DNA MER1_type -1891 721 689 2305 177 51 17 chr20 12441035 12441505 -59712377 - MER66B LTR ERV1 0 486 1 389 210 91 35 chr20 12441505 12441612 -59712270 - Charlie7 DNA MER1_type -1923 689 571 559 190 0 16 chr20 12441725 12441846 -59712036 - MSTC-int LTR MaLR -1615 120 2 2066 153 105 15 chr20 12441849 12442241 -59711641 - MSTC LTR MaLR -1 427 1 33 43 0 0 chr20 12442682 12442729 -59711153 + AT_rich Low_complexity Low_complexity 1 47 0 1897 189 0 3 chr20 12442736 12443049 -59710833 - AluJb SINE Alu 0 312 1 508 250 71 14 chr20 12443182 12443394 -59710488 + MER102b DNA MER1_type 118 341 0 801 236 120 27 chr20 12443856 12444148 -59709734 - L1ME3A LINE L1 -8 6162 5844 259 224 20 41 chr20 12444242 12444340 -59709542 + L1ME LINE L1 5609 5704 -466 225 234 0 31 chr20 12444965 12445029 -59708853 + T-rich Low_complexity Low_complexity 4 65 0 7214 44 15 32 chr20 12446384 12447950 -59705932 - SVA Other Other -799 1384 1 892 39 10 0 chr20 12447962 12448065 -59705817 - AluY SINE Alu -173 138 35 257 291 34 60 chr20 12448458 12448575 -59705307 - L2 LINE L2 -618 2696 2583 327 158 18 0 chr20 12448951 12449008 -59704874 - L1MC1 LINE L1 -283 6050 5993 29 28 0 0 chr20 12449092 12449128 -59704754 + AT_rich Low_complexity Low_complexity 1 36 0 233 336 103 30 chr20 12451980 12452251 -59701631 + MLT1J LTR MaLR 29 319 -192 2392 115 19 24 chr20 12452317 12452692 -59701190 + MER83C LTR ERV1 1 373 0 183 80 0 0 chr20 12452716 12452741 -59701141 + (GAAAA)n Simple_repeat Simple_repeat 1 25 0 301 276 112 26 chr20 12452838 12452990 -59700892 + MIR SINE MIR 91 255 -7 2429 65 3 7 chr20 12453513 12453821 -59700061 + AluY SINE Alu 1 307 -4 301 118 44 29 chr20 12456387 12456455 -59697427 + CT-rich Low_complexity Low_complexity 2 70 0 468 248 53 0 chr20 12456870 12456983 -59696899 + L2 LINE L2 3151 3269 -3 1052 252 192 19 chr20 12457530 12458057 -59695825 + L1ME3A LINE L1 5551 6168 -2 1915 279 75 47 chr20 12458090 12458558 -59695324 + L2 LINE L2 2058 2512 -801 423 0 0 0 chr20 12458558 12458605 -59695277 + (TG)n Simple_repeat Simple_repeat 2 48 0 1915 279 75 47 chr20 12458605 12459353 -59694529 + L2 LINE L2 2512 3313 0 324 48 0 0 chr20 12459639 12459681 -59694201 + (A)n Simple_repeat Simple_repeat 1 42 0 264 273 174 37 chr20 12460254 12460415 -59693467 + Charlie8 DNA MER1_type 2 184 -2233 796 176 98 0 chr20 12460430 12460583 -59693299 + MER5A DNA MER1_type 2 169 -20 1507 95 9 48 chr20 12461397 12461628 -59692254 + AluSc SINE Alu 76 297 -12 1213 87 10 29 chr20 12461628 12461928 -59691954 + (GAAA)n Simple_repeat Simple_repeat 1 360 0 28 79 0 0 chr20 12462422 12462485 -59691397 + AT_rich Low_complexity Low_complexity 1 63 0 2246 110 7 0 chr20 12462745 12463054 -59690828 - AluSx SINE Alu -1 311 1 213 224 190 17 chr20 12463543 12463601 -59690281 - MIR3 SINE MIR -52 156 89 2174 104 0 0 chr20 12465506 12465793 -59688089 - AluSx SINE Alu -7 305 19 273 88 349 17 chr20 12468781 12468866 -59685016 + MADE1 DNA Mariner 1 80 0 847 269 50 11 chr20 12468906 12469189 -59684693 - LTR16C LTR ERVL -2 489 196 1920 82 15 8 chr20 12469433 12469700 -59684182 - AluSc SINE Alu -9 300 32 276 320 164 0 chr20 12469799 12469927 -59683955 - MIR SINE MIR -69 193 45 1795 166 9 34 chr20 12470929 12471249 -59682633 - AluSx SINE Alu 0 312 1 652 338 5 0 chr20 12471263 12471467 -59682415 + MIR SINE MIR 44 248 -14 250 308 39 54 chr20 12471577 12471707 -59682175 - MIR SINE MIR -74 188 61 2232 88 54 0 chr20 12472258 12472552 -59681330 - AluSg SINE Alu 0 310 1 664 200 0 15 chr20 12473192 12473327 -59680555 - FLAM_C SINE Alu 0 133 1 227 147 0 0 chr20 12474055 12474089 -59679793 + MER63 DNA MER1_type 3 36 -174 220 167 33 0 chr20 12474090 12474150 -59679732 + A-rich Low_complexity Low_complexity 4 65 0 1557 210 44 5 chr20 12474156 12474523 -59679359 + MER63 DNA MER1_type 677 1057 -5 619 345 50 61 chr20 12475045 12475488 -59678394 - L2 LINE L2 0 3272 2835 290 333 26 11 chr20 12475585 12475774 -59678108 - L2 LINE L2 -763 2551 2360 327 239 137 43 chr20 12476882 12476999 -59676883 - MER5A DNA MER1_type -53 136 9 969 156 17 6 chr20 12477015 12477188 -59676694 + MER3 DNA MER1_type 1 128 -81 417 242 37 99 chr20 12477423 12477584 -59676298 + MIR SINE MIR 29 179 -83 348 218 0 0 chr20 12478137 12478224 -59675658 + (TA)n Simple_repeat Simple_repeat 2 88 0 245 259 0 0 chr20 12478287 12478341 -59675541 - MIR SINE MIR -32 230 177 21 0 0 0 chr20 12479080 12479101 -59674781 + AT_rich Low_complexity Low_complexity 1 21 0 423 38 0 0 chr20 12479241 12479294 -59674588 + (TG)n Simple_repeat Simple_repeat 1 53 0 264 314 105 12 chr20 12480157 12480631 -59673251 - L1MEc LINE L1 -4782 1528 970 661 240 64 56 chr20 12480641 12481001 -59672881 + LTR18A LTR ERVL 1 614 0 627 317 139 62 chr20 12481003 12481701 -59672181 - L1MEc LINE L1 -5158 961 210 7058 14 1 0 chr20 12481777 12482581 -59671301 + L1PA3 LINE L1 5351 6155 0 615 291 232 9 chr20 12482643 12483027 -59670855 - L3 LINE CR1 -603 974 471 2045 141 16 3 chr20 12483027 12483332 -59670550 - AluSx SINE Alu 0 312 4 615 291 232 9 chr20 12483332 12483404 -59670478 - L3 LINE CR1 -1106 471 416 1328 236 8 32 chr20 12484055 12484424 -59669458 + L1ME3 LINE L1 5802 6161 -1 216 233 78 112 chr20 12484546 12484662 -59669220 + MIR SINE MIR 119 230 -32 432 325 25 12 chr20 12484858 12485018 -59668864 - MIR SINE MIR -56 206 45 581 185 122 27 chr20 12485033 12485189 -59668693 - MER5A DNA MER1_type -9 180 4 3863 181 37 10 chr20 12485846 12486625 -59667257 - L1MB8 LINE L1 0 6178 5379 1065 167 93 0 chr20 12486635 12486839 -59667043 - AluJb SINE Alu -7 305 83 271 211 16 0 chr20 12486839 12486929 -59666953 - L1MB8 LINE L1 -800 5366 5276 200 119 0 24 chr20 12486951 12486993 -59666889 + (TTTTG)n Simple_repeat Simple_repeat 4 44 0 754 191 8 0 chr20 12488658 12488784 -59665098 + FLAM_A SINE Alu 1 127 -6 754 280 146 35 chr20 12488919 12489290 -59664592 - MLT1J2 LTR MaLR -18 432 21 700 277 190 33 chr20 12490224 12490685 -59663197 - L2 LINE L2 -1 3312 2784 375 41 0 0 chr20 12491094 12491143 -59662739 + (CA)n Simple_repeat Simple_repeat 1 49 0 743 180 0 0 chr20 12491399 12491521 -59662361 + FLAM_A SINE Alu 1 122 -11 388 226 57 19 chr20 12491546 12491652 -59662230 - MIR SINE MIR -79 183 74 331 208 65 0 chr20 12492061 12492138 -59661744 - MER5A DNA MER1_type -83 106 25 279 349 171 7 chr20 12492700 12492846 -59661036 - MER5A DNA MER1_type -6 183 14 357 352 31 0 chr20 12493102 12493230 -59660652 + MER5B DNA MER1_type 2 133 -45 292 272 328 0 chr20 12493218 12493343 -59660539 + MER5A DNA MER1_type 17 182 -7 * 2179 182 36 19 chr20 12493589 12494007 -59659875 - MSTB LTR MaLR 0 426 2 195 379 0 0 chr20 12494260 12494326 -59659556 - L2 LINE L2 -14 3299 3234 193 343 61 20 chr20 12494485 12494584 -59659298 - L2 LINE L2 -238 3034 2932 22 35 0 0 chr20 12494584 12494613 -59659269 + AT_rich Low_complexity Low_complexity 1 29 0 24 32 0 0 chr20 12495346 12495377 -59658505 + AT_rich Low_complexity Low_complexity 1 31 0 1622 145 30 7 chr20 12496924 12497193 -59656689 + AluSx SINE Alu 1 275 -37 2374 104 0 0 chr20 12498187 12498496 -59655386 - AluSc SINE Alu 0 309 1 357 250 91 122 chr20 12500043 12500121 -59653761 + L2 LINE L2 2910 2989 -324 2201 121 3 0 chr20 12500121 12500419 -59653463 - AluSp SINE Alu -14 299 1 357 250 91 122 chr20 12500419 12500448 -59653434 + L2 LINE L2 2989 3017 -296 1893 120 52 3 chr20 12500448 12500739 -59653143 - AluSx SINE Alu -4 308 4 357 250 91 122 chr20 12500739 12500982 -59652900 + L2 LINE L2 3017 3250 -63 180 288 136 15 chr20 12501860 12501926 -59651956 + MER5A DNA MER1_type 42 115 -74 2392 103 33 11 chr20 12501965 12502332 -59651550 - THE1C LTR MaLR 0 375 1 2892 6 0 0 chr20 12502576 12502889 -59650993 - AluYb8 SINE Alu -5 313 1 180 158 0 0 chr20 12503198 12503236 -59650646 + (TG)n Simple_repeat Simple_repeat 2 39 0 294 231 26 0 chr20 12503989 12504067 -59649815 + LTR16A1 LTR ERVL 159 238 -219 660 205 84 0 chr20 12504413 12504579 -59649303 + LTR16A1 LTR ERVL 270 449 -8 343 258 70 37 chr20 12506263 12506498 -59647384 + MLT1I LTR MaLR 90 384 -25 1269 210 52 12 chr20 12506549 12506939 -59646943 - L1MC/D LINE L1 -569 5833 5509 351 181 0 0 chr20 12506944 12507016 -59646866 + (TA)n Simple_repeat Simple_repeat 2 73 0 679 215 55 36 chr20 12507038 12507312 -59646570 - L1MC/D LINE L1 -880 5502 5224 518 181 26 0 chr20 12507299 12507415 -59646467 - L1MC/D LINE L1 -1598 4784 4666 * 264 241 35 51 chr20 12507416 12507544 -59646338 - L1MDa LINE L1 -4897 1485 1283 1063 236 55 89 chr20 12507682 12508122 -59645760 - L1MDa LINE L1 -5935 628 204 210 37 0 0 chr20 12508565 12508592 -59645290 + (TG)n Simple_repeat Simple_repeat 2 28 0 234 0 0 0 chr20 12508943 12508969 -59644913 + (TG)n Simple_repeat Simple_repeat 1 26 0 196 281 52 42 chr20 12510911 12511007 -59642875 + MIR SINE MIR 91 187 -75 619 279 77 39 chr20 12511208 12511441 -59642441 - MIR SINE MIR 0 262 21 2506 68 0 0 chr20 12511480 12511791 -59642091 - AluY SINE Alu 0 311 1 199 346 148 36 chr20 12511815 12512199 -59641683 + L2 LINE L2 2864 3290 -23 1537 132 11 53 chr20 12512305 12512570 -59641312 + AluJb SINE Alu 1 254 -58 218 273 69 23 chr20 12512940 12513067 -59640815 - MIR SINE MIR -55 207 76 2084 124 7 3 chr20 12514190 12514489 -59639393 - AluSc SINE Alu -9 300 1 235 367 25 17 chr20 12514540 12514660 -59639222 - L2 LINE L2 0 3313 3193 435 222 65 24 chr20 12514749 12514905 -59638977 - MLT1I LTR MaLR -6 548 338 334 348 58 0 chr20 12515898 12516036 -59637846 - L2 LINE L2 0 3313 3168 379 361 27 32 chr20 12516817 12517036 -59636846 + MIR SINE MIR 12 229 -33 283 250 0 15 chr20 12517436 12517504 -59636378 + L2 LINE L2 3205 3271 -1 468 0 0 0 chr20 12517959 12518011 -59635871 + (TA)n Simple_repeat Simple_repeat 2 53 0 262 209 173 58 chr20 12519105 12519244 -59634638 + MIR SINE MIR 67 221 -41 22 35 0 0 chr20 12519917 12519946 -59633936 + AT_rich Low_complexity Low_complexity 1 29 0 990 296 42 15 chr20 12520200 12520535 -59633347 - MLT1I LTR MaLR -60 349 6 1352 199 34 24 chr20 12520967 12521259 -59632623 - AluJo SINE Alu -17 295 1 22 35 0 0 chr20 12522934 12522963 -59630919 + AT_rich Low_complexity Low_complexity 1 29 0 2397 158 16 23 chr20 12522991 12523427 -59630455 - Tigger2a DNA MER2_type -1 433 1 267 180 20 0 chr20 12523445 12523495 -59630387 - MER94 DNA DNA -79 55 5 266 254 14 0 chr20 12524277 12524348 -59629534 - LTR58 LTR ERV1 -249 430 359 1539 214 39 120 chr20 12524538 12525154 -59628728 - MER97b DNA MER1_type? -486 567 2 713 92 23 8 chr20 12525750 12525880 -59628002 + (TAGA)n Simple_repeat Simple_repeat 4 135 0 2431 79 0 16 chr20 12526467 12526784 -59627098 - AluSq SINE Alu 0 313 2 5366 145 26 54 chr20 12526952 12528079 -59625803 - L1MA7 LINE L1 0 6291 5195 270 109 23 46 chr20 12528655 12528730 -59625152 - L1MA7 LINE L1 0 6297 6230 2061 150 50 13 chr20 12528802 12529183 -59624699 - L1MA7 LINE L1 -37 6254 5860 318 162 59 15 chr20 12529222 12529290 -59624592 + L1ME3 LINE L1 5883 5953 -217 244 320 82 0 chr20 12529296 12529393 -59624489 + L1ME3 LINE L1 6008 6112 -50 1646 154 19 56 chr20 12529822 12530146 -59623736 + AluJo SINE Alu 1 312 0 840 140 11 101 chr20 12530179 12530251 -59623631 + AluJo SINE Alu 24 101 -211 2185 113 0 19 chr20 12530251 12530569 -59623313 + AluSx SINE Alu 1 312 0 840 140 11 101 chr20 12530569 12530675 -59623207 + AluJo SINE Alu 101 186 -126 460 299 153 0 chr20 12530933 12531090 -59622792 - MER5A DNA MER1_type 0 189 9 228 250 177 0 chr20 12531815 12531911 -59621971 - MLT1F LTR MaLR -19 523 411 2333 133 23 0 chr20 12531952 12532306 -59621576 - THE1B LTR MaLR -2 362 1 231 263 53 13 chr20 12532463 12532539 -59621343 - MLT1I LTR MaLR -266 143 65 429 20 0 0 chr20 12532759 12532809 -59621073 + (TA)n Simple_repeat Simple_repeat 2 51 0 196 313 100 0 chr20 12533119 12533199 -59620683 - L2 LINE L2 -236 3036 2949 887 173 6 6 chr20 12533431 12533587 -59620295 - LTR32 LTR ERVL 0 471 316 * 1914 142 41 38 chr20 12533586 12533930 -59619952 - LTR32 LTR ERVL -119 352 8 2386 82 0 0 chr20 12533996 12534288 -59619594 + AluSc SINE Alu 1 292 -17 445 164 0 0 chr20 12534296 12534369 -59619513 - AluJ/FRAM SINE Alu -16 296 224 253 352 30 91 chr20 12534671 12534708 -59619174 - L2 LINE L2 -4 3268 3230 3426 136 8 22 chr20 12534708 12535243 -59618639 - MER1A DNA MER1_type 0 527 1 253 352 30 91 chr20 12535243 12535569 -59618313 - L2 LINE L2 -42 3230 2927 849 236 56 20 chr20 12536613 12536899 -59616983 - L1ME3 LINE L1 -7 6155 5860 1374 168 4 4 chr20 12537526 12537752 -59616130 + AluJb SINE Alu 11 236 -76 549 145 8 97 chr20 12538325 12538449 -59615433 + LTR16A1 LTR ERVL 345 457 0 298 267 0 0 chr20 12539307 12539367 -59614515 - L2 LINE L2 -16 3297 3238 285 29 0 0 chr20 12539493 12539527 -59614355 + (TG)n Simple_repeat Simple_repeat 1 34 0 288 0 0 0 chr20 12539560 12539592 -59614290 + (TC)n Simple_repeat Simple_repeat 2 33 0 225 0 0 0 chr20 12539591 12539616 -59614266 + (TA)n Simple_repeat Simple_repeat 2 26 0 * 204 179 0 0 chr20 12540052 12540091 -59613791 + (TTAA)n Simple_repeat Simple_repeat 4 42 0 29 28 0 0 chr20 12541123 12541159 -59612723 + AT_rich Low_complexity Low_complexity 1 36 0 432 325 12 6 chr20 12542089 12542249 -59611633 + L1ME3A LINE L1 5970 6130 -40 432 290 61 41 chr20 12543142 12543387 -59610495 + MIR SINE MIR 13 262 0 786 242 44 24 chr20 12543635 12543883 -59609999 + L1ME3 LINE L1 5908 6160 -2 21 36 0 0 chr20 12543900 12543928 -59609954 + AT_rich Low_complexity Low_complexity 1 28 0 233 281 27 68 chr20 12544040 12544186 -59609696 + L1ME LINE L1 5683 5822 -299 1753 196 71 51 chr20 12544194 12544644 -59609238 + L1ME2 LINE L1 5548 6006 -158 725 265 80 61 chr20 12545885 12546346 -59607536 - L1ME3 LINE L1 -447 5723 5254 496 327 64 11 chr20 12546394 12546752 -59607130 - L1ME3 LINE L1 -3094 3052 2676 385 324 77 31 chr20 12546852 12547074 -59606808 - L1M4 LINE L1 -1120 5026 4795 229 182 18 36 chr20 12547542 12547597 -59606285 + (TATG)n Simple_repeat Simple_repeat 2 55 0 244 258 45 0 chr20 12548837 12548926 -59604956 + GA-rich Low_complexity Low_complexity 4 96 0 7644 28 0 0 chr20 12548932 12550156 -59603726 - L1PA3 LINE L1 0 6155 4957 867 162 32 13 chr20 12550206 12550360 -59603522 - AluJo/FRAM SINE Alu -21 291 135 441 167 0 0 chr20 12550360 12550432 -59603450 - AluJ/FLAM SINE Alu -236 76 5 180 0 0 0 chr20 12551200 12551220 -59602662 + (A)n Simple_repeat Simple_repeat 1 20 0 243 88 0 0 chr20 12551297 12551331 -59602551 + (A)n Simple_repeat Simple_repeat 1 34 0 322 133 20 21 chr20 12551671 12551765 -59602117 + MER20 DNA MER1_type 21 215 -4 528 236 27 20 chr20 12551920 12552068 -59601814 + MER69 DNA AcHobo 1 149 -2377 23 0 0 0 chr20 12552068 12552091 -59601791 + AT_rich Low_complexity Low_complexity 1 23 0 409 270 87 44 chr20 12552586 12552939 -59600943 - MLT1F LTR MaLR -105 444 81 1788 150 49 14 chr20 12553112 12553714 -59600168 - MER50 LTR ERV1 0 734 1 1525 187 14 21 chr20 12554459 12554743 -59599139 - AluJo SINE Alu -30 282 1 2040 113 24 0 chr20 12554890 12555181 -59598701 - AluSx SINE Alu -14 298 1 216 261 77 15 chr20 12555630 12555695 -59598187 + L2 LINE L2 3218 3286 -27 907 127 11 17 chr20 12555711 12555892 -59597990 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 21 36 0 0 chr20 12556996 12557024 -59596858 + AT_rich Low_complexity Low_complexity 1 28 0 203 358 11 11 chr20 12557360 12557455 -59596427 - L2 LINE L2 -501 2813 2719 494 44 29 0 chr20 12557644 12557712 -59596170 + (GAAA)n Simple_repeat Simple_repeat 1 70 0 264 284 46 28 chr20 12558810 12558919 -59594963 - MIR3 SINE MIR -3 205 95 329 248 8 86 chr20 12559006 12559123 -59594759 - L2 LINE L2 0 3313 3206 336 207 0 0 chr20 12559170 12559228 -59594654 + MER5A DNA MER1_type 49 106 -83 359 309 20 13 chr20 12559327 12559476 -59594406 - L2 LINE L2 -455 2859 2710 676 274 74 0 chr20 12559510 12559700 -59594182 + L1ME1 LINE L1 5946 6149 -17 2047 109 87 6 chr20 12559745 12560092 -59593790 + THE1C LTR MaLR 1 375 0 770 128 7 28 chr20 12560147 12560288 -59593594 + L1PA16 LINE L1 6029 6166 0 293 310 26 69 chr20 12560452 12560674 -59593208 + MIR3 SINE MIR 5 216 -46 200 349 108 23 chr20 12561025 12561154 -59592728 - L2 LINE L2 0 3272 3133 604 342 57 53 chr20 12561316 12561822 -59592060 - L2 LINE L2 -384 2930 2423 268 261 81 9 chr20 12561917 12562028 -59591854 - MIR SINE MIR -56 206 88 2404 84 7 3 chr20 12562129 12562437 -59591445 + AluSg SINE Alu 1 309 -1 485 327 57 46 chr20 12563544 12564131 -59589751 + L2 LINE L2 2396 3060 -253 571 194 17 35 chr20 12564155 12564483 -59589399 + CT-rich Low_complexity Low_complexity 1 321 0 314 217 14 14 chr20 12564505 12564643 -59589239 + CT-rich Low_complexity Low_complexity 2 139 0 264 125 47 0 chr20 12564647 12564711 -59589171 + (TCTA)n Simple_repeat Simple_repeat 2 68 0 314 312 65 43 chr20 12564748 12564934 -59588948 + L2 LINE L2 3123 3312 -1 1142 88 25 6 chr20 12565100 12565259 -59588623 + L1PA8 LINE L1 5998 6159 -13 33 0 0 0 chr20 12565278 12565311 -59588571 + AT_rich Low_complexity Low_complexity 1 33 0 1139 130 89 71 chr20 12565534 12565690 -59588192 + THE1C LTR MaLR 1 166 -209 1577 154 95 7 chr20 12565690 12565963 -59587919 - AluSx SINE Alu -12 300 4 1139 130 89 71 chr20 12565963 12566075 -59587807 + THE1C LTR MaLR 166 274 -101 2028 92 3 3 chr20 12566078 12566373 -59587509 + THE1C-int LTR MaLR 1285 1579 -1 1809 141 65 23 chr20 12566374 12566728 -59587154 + THE1C LTR MaLR 1 369 -6 200 271 0 0 chr20 12566936 12566984 -59586898 + CT-rich Low_complexity Low_complexity 1 48 0 740 270 172 3 chr20 12567627 12567946 -59585936 + LTR16C LTR ERVL 88 460 -31 29 0 0 0 chr20 12568319 12568348 -59585534 + AT_rich Low_complexity Low_complexity 1 29 0 1914 149 4 7 chr20 12569820 12570101 -59583781 + AluSx SINE Alu 8 287 -25 2422 231 33 36 chr20 12570141 12570875 -59583007 + L1ME2 LINE L1 5444 6334 0 207 0 0 0 chr20 12571065 12571088 -59582794 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 582 272 42 9 chr20 12571098 12571315 -59582567 - L1M4 LINE L1 -6318 224 1 909 264 66 59 chr20 12572311 12572750 -59581132 + L1M4 LINE L1 325 766 -5776 414 0 0 0 chr20 12572751 12572797 -59581085 + (TG)n Simple_repeat Simple_repeat 2 47 0 439 200 61 0 chr20 12572799 12572914 -59580968 + L1M4 LINE L1 823 944 -5598 * 3844 183 27 18 chr20 12572908 12573066 -59580816 + L1MB3 LINE L1 5318 5473 -710 379 47 0 31 chr20 12573066 12573130 -59580752 + (TAAA)n Simple_repeat Simple_repeat 3 64 0 3844 183 27 18 chr20 12573130 12573827 -59580055 + L1MB3 LINE L1 5473 6181 -2 854 216 38 19 chr20 12573822 12574086 -59579796 + L1M4 LINE L1 926 1194 -5348 * 1708 128 28 28 chr20 12574088 12574409 -59579473 + L1MA3 LINE L1 5977 6297 -8 22 0 0 0 chr20 12574414 12574436 -59579446 + AT_rich Low_complexity Low_complexity 1 22 0 2460 246 49 39 chr20 12574483 12575882 -59578000 + L1M4 LINE L1 1438 2960 -3684 246 374 52 0 chr20 12576032 12576147 -59577735 - L2 LINE L2 -1 3271 3151 895 231 11 5 chr20 12576150 12576336 -59577546 - MER5A DNA MER1_type 0 189 3 562 239 68 6 chr20 12576350 12576513 -59577369 - MER5B DNA MER1_type -4 174 2 445 315 0 31 chr20 12576513 12576643 -59577239 + MER5B DNA MER1_type 8 133 -45 222 176 106 59 chr20 12576999 12577084 -59576798 + L3b LINE CR1 1296 1384 -199 447 316 23 0 chr20 12578291 12578465 -59575417 - MER5B DNA MER1_type 0 178 1 506 301 28 6 chr20 12579462 12579638 -59574244 - LTR33 LTR ERVL -315 206 27 8640 72 9 1 chr20 12579654 12581575 -59572307 + L1PA7 LINE L1 4204 6143 -11 39 74 0 0 chr20 12581585 12581666 -59572216 + AT_rich Low_complexity Low_complexity 1 81 0 336 271 5 101 chr20 12581764 12581952 -59571930 + MLT1J LTR MaLR 133 302 -209 21 36 0 0 chr20 12582088 12582116 -59571766 + AT_rich Low_complexity Low_complexity 1 28 0 634 164 0 0 chr20 12583739 12583849 -59570033 + 7SLRNA srpRNA srpRNA 210 319 -1 855 299 49 51 chr20 12584858 12585347 -59568535 - LTR16C LTR ERVL -2 489 2 467 317 98 19 chr20 12585678 12585943 -59567939 + L1ME4a LINE L1 5724 6009 -112 443 280 102 52 chr20 12585971 12586410 -59567472 - MLT1K LTR MaLR -17 571 111 215 296 14 0 chr20 12586481 12586552 -59567330 + (TATATG)n Simple_repeat Simple_repeat 1 72 0 325 294 108 0 chr20 12586609 12586711 -59567171 - L2 LINE L2 0 3313 3201 1742 331 73 30 chr20 12586713 12587288 -59566594 - L2 LINE L2 -29 3284 2735 2022 146 0 19 chr20 12587288 12587603 -59566279 + AluSx SINE Alu 1 309 -3 1742 331 73 30 chr20 12587603 12587942 -59565940 - L2 LINE L2 -578 2735 2412 4238 209 60 14 chr20 12587942 12588935 -59564947 - MER45B DNA AcHobo -1 1039 1 1742 331 73 30 chr20 12588935 12589516 -59564366 - L2 LINE L2 -901 2412 1713 2080 122 17 3 chr20 12590215 12590510 -59563372 + AluSx SINE Alu 1 299 -13 1373 269 42 12 chr20 12590599 12591000 -59562882 - LTR16C LTR ERVL -13 478 66 273 255 11 53 chr20 12591144 12591238 -59562644 - MIR3 SINE MIR -37 171 82 2445 61 0 29 chr20 12593242 12593554 -59560328 + AluY SINE Alu 1 303 -8 262 211 0 89 chr20 12595162 12595252 -59558630 + MLT1H LTR MaLR 7 88 -461 259 236 9 104 chr20 12595524 12595630 -59558252 + MLT1J LTR MaLR 454 549 0 2189 161 30 39 chr20 12595892 12596351 -59557531 - MER74A LTR ERVL -103 455 1 534 327 147 31 chr20 12596717 12597244 -59556638 - L2 LINE L2 -9 3263 2678 353 242 66 11 chr20 12597246 12597337 -59556545 + L2 LINE L2 3152 3247 -25 232 243 29 14 chr20 12597386 12597456 -59556426 + MLT1J LTR MaLR 111 181 -330 575 197 8 34 chr20 12597716 12597833 -59556049 + MER81 DNA DNA 1 114 0 794 265 5 28 chr20 12597998 12598213 -59555669 - MER63A DNA MER1_type 0 210 1 1377 235 22 35 chr20 12598268 12598673 -59555209 + LTR16A1 LTR ERVL 5 404 -53 2279 153 23 48 chr20 12598685 12598800 -59555082 + L1MB3 LINE L1 5711 5827 -356 2175 139 0 3 chr20 12598800 12599109 -59554773 + AluSx SINE Alu 1 308 -4 2279 153 23 48 chr20 12599109 12599476 -59554406 + L1MB3 LINE L1 5827 6181 -2 276 200 67 0 chr20 12599529 12599589 -59554293 + LTR16A1 LTR ERVL 394 457 0 399 56 0 0 chr20 12600548 12600602 -59553280 + (CA)n Simple_repeat Simple_repeat 2 55 0 2190 119 0 0 chr20 12600788 12601083 -59552799 - AluSg SINE Alu -15 295 1 185 357 56 56 chr20 12601564 12601760 -59552122 + L2 LINE L2 2841 3036 -277 194 387 95 41 chr20 12601901 12602144 -59551738 + L2 LINE L2 3017 3272 0 25 0 0 0 chr20 12603265 12603290 -59550592 + AT_rich Low_complexity Low_complexity 1 25 0 188 348 14 0 chr20 12603976 12604045 -59549837 + MIR3 SINE MIR 134 203 -5 1491 181 32 74 chr20 12604501 12604905 -59548977 + MLT1B LTR MaLR 1 387 -3 347 254 146 0 chr20 12605301 12605411 -59548471 - L2 LINE L2 0 3313 3188 2107 139 0 72 chr20 12605474 12605705 -59548177 - MLT1A1 LTR MaLR 0 365 172 1965 166 3 10 chr20 12605705 12606013 -59547869 - AluJb SINE Alu -6 306 1 2107 139 0 72 chr20 12606013 12606170 -59547712 - MLT1A1 LTR MaLR -193 172 5 21 36 0 0 chr20 12606468 12606496 -59547386 + AT_rich Low_complexity Low_complexity 1 28 0 1698 203 85 34 chr20 12606571 12606912 -59546970 - MLT1D LTR MaLR -9 496 123 2997 51 8 0 chr20 12606912 12607287 -59546595 - L1PA10 LINE L1 -5 6163 5786 1698 203 85 34 chr20 12607287 12607417 -59546465 - MLT1D LTR MaLR -382 123 1 2685 117 32 15 chr20 12607971 12608434 -59545448 - Tigger4(Zombi) DNA MER2_type 0 2731 2261 2435 155 58 7 chr20 12608433 12608865 -59545017 - Tigger4(Zombi) DNA MER2_type -2277 454 1 * 672 231 24 18 chr20 12608975 12609144 -59544738 + MER5B DNA MER1_type 1 170 -8 1519 186 51 7 chr20 12609278 12609436 -59544446 - AluJo SINE Alu -25 287 110 261 83 0 0 chr20 12609436 12609472 -59544410 + (TG)n Simple_repeat Simple_repeat 1 36 0 1519 186 51 7 chr20 12609472 12609588 -59544294 - AluJo SINE Alu -202 110 1 186 150 0 0 chr20 12609720 12609760 -59544122 + (TTTTTA)n Simple_repeat Simple_repeat 2 41 0 1501 182 13 64 chr20 12609982 12610295 -59543587 - AluJo SINE Alu -15 297 1 482 245 159 6 chr20 12610494 12610657 -59543225 - MER5A DNA MER1_type 0 189 2 25556 27 16 1 chr20 12611196 12617222 -59536660 - L1PA2 LINE L1 -2 6153 1 1889 77 8 4 chr20 12617314 12617575 -59536307 - L1PA13 LINE L1 -6 6157 5896 209 200 0 60 chr20 12617658 12617708 -59536174 - MIR SINE MIR -2 260 214 1006 153 68 0 chr20 12619646 12619822 -59534060 + MER5A DNA MER1_type 1 188 -1 898 104 0 104 chr20 12619933 12620065 -59533817 + L1MB5 LINE L1 6012 6121 -53 2150 149 0 0 chr20 12620065 12620373 -59533509 + AluSx SINE Alu 1 308 -4 898 104 0 104 chr20 12620373 12620422 -59533460 + L1MB5 LINE L1 6121 6174 0 21 36 0 0 chr20 12620894 12620922 -59532960 + AT_rich Low_complexity Low_complexity 1 28 0 24 32 0 0 chr20 12621032 12621063 -59532819 + AT_rich Low_complexity Low_complexity 1 31 0 395 287 128 39 chr20 12621170 12621505 -59532377 - L1ME4a LINE L1 -11 6110 5746 186 43 0 0 chr20 12621700 12621723 -59532159 + (T)n Simple_repeat Simple_repeat 1 23 0 2285 167 9 23 chr20 12621754 12622191 -59531691 - L1PB4 LINE L1 -13 6143 5713 309 253 0 13 chr20 12622451 12622526 -59531356 + MIR SINE MIR 93 166 -96 308 326 93 17 chr20 12622678 12622914 -59530968 - L1 LINE L1 -2385 3761 3508 200 355 19 56 chr20 12622986 12623093 -59530789 - L2 LINE L2 -617 2697 2595 830 281 102 55 chr20 12623107 12623699 -59530183 + L2 LINE L2 2389 3001 -312 198 280 0 0 chr20 12623850 12623900 -59529982 + L2 LINE L2 3223 3272 0 737 109 5 9 chr20 12623986 12624114 -59529768 + L1MA8 LINE L1 6161 6277 -14 265 193 50 107 chr20 12624144 12624284 -59529598 + L1ME3 LINE L1 6031 6162 0 621 75 0 0 chr20 12625276 12625356 -59528526 + MADE1 DNA Mariner 1 80 0 691 205 0 54 chr20 12625743 12625909 -59527973 - FRAM SINE Alu -20 156 1 3171 179 14 16 chr20 12625995 12626249 -59527633 - L1MB7 LINE L1 -30 6154 5901 519 113 0 0 chr20 12626249 12626329 -59527553 - MADE1 DNA Mariner 0 80 1 3171 179 14 16 chr20 12626329 12626700 -59527182 - L1MB7 LINE L1 -283 5901 5530 1314 193 33 0 chr20 12626702 12627007 -59526875 - L1MB7 LINE L1 -885 5261 4947 28 61 0 0 chr20 12627170 12627219 -59526663 + AT_rich Low_complexity Low_complexity 1 49 0 994 193 0 0 chr20 12627890 12628061 -59525821 + AluJb SINE Alu 133 303 -9 232 345 160 24 chr20 12628114 12628320 -59525562 + L2 LINE L2 3038 3271 -1 283 128 64 0 chr20 12628883 12628930 -59524952 - tRNA-Cys-TGC tRNA tRNA -25 50 1 21 36 0 0 chr20 12629206 12629234 -59524648 + AT_rich Low_complexity Low_complexity 1 28 0 366 316 65 53 chr20 12629872 12630322 -59523560 + L1MC/D LINE L1 5056 5505 -657 324 250 50 96 chr20 12630350 12630570 -59523312 + L1MC/D LINE L1 5603 5812 -309 24 32 0 0 chr20 12630581 12630612 -59523270 + AT_rich Low_complexity Low_complexity 1 31 0 387 0 0 0 chr20 12630679 12630722 -59523160 + (TG)n Simple_repeat Simple_repeat 2 44 0 832 214 71 5 chr20 12630744 12630940 -59522942 - MER3 DNA MER1_type 0 209 1 311 215 131 9 chr20 12630940 12631047 -59522835 + HAL1b LINE L1 1212 1331 -17 408 192 0 0 chr20 12631085 12631163 -59522719 - L1ME4a LINE L1 -81 6040 5963 193 294 0 0 chr20 12631975 12632026 -59521856 + L2 LINE L2 2325 2375 -939 1614 118 80 42 chr20 12632292 12632581 -59521301 + AluSx SINE Alu 3 302 -10 225 140 20 40 chr20 12632767 12632817 -59521065 + CT-rich Low_complexity Low_complexity 1 49 0 455 312 49 76 chr20 12632857 12633012 -59520870 - MLT1K LTR MaLR -239 349 200 2142 126 0 0 chr20 12633012 12633321 -59520561 - AluSx SINE Alu 0 311 3 455 312 49 76 chr20 12633321 12633426 -59520456 - MLT1K LTR MaLR -388 200 94 22 94 0 0 chr20 12634228 12634292 -59519590 + AT_rich Low_complexity Low_complexity 1 64 0 444 294 58 34 chr20 12634402 12634814 -59519068 + L1M4 LINE L1 4877 5298 -848 1851 111 0 32 chr20 12636871 12637186 -59516696 + L1MA5A LINE L1 5990 6294 -3 1132 233 34 48 chr20 12638424 12638776 -59515106 - MLT1A1 LTR MaLR 0 365 19 2253 115 0 6 chr20 12639201 12639513 -59514369 - AluSg SINE Alu 0 310 1 470 309 89 44 chr20 12639789 12640275 -59513607 + LTR33 LTR ERVL 32 522 -1 8971 43 3 0 chr20 12640279 12642162 -59511720 - L1PA5 LINE L1 -6 6148 4272 6104 45 3 5 chr20 12642163 12642924 -59510958 + L1PA5 LINE L1 3512 4270 -1876 195 396 7 22 chr20 12643085 12643224 -59510658 + L3 LINE CR1 646 782 -795 222 299 189 8 chr20 12643307 12643434 -59510448 + L3 LINE CR1 945 1094 -483 189 258 136 68 chr20 12643463 12643595 -59510287 + MIR SINE MIR 4 144 -118 639 314 113 23 chr20 12643691 12644035 -59509847 + L3 LINE CR1 1136 1510 -67 264 286 0 0 chr20 12645131 12645194 -59508688 + MIR3 SINE MIR 144 206 -2 197 227 0 0 chr20 12645447 12645491 -59508391 - MIR SINE MIR -101 161 118 557 301 34 53 chr20 12645721 12646076 -59507806 + LTR16C LTR ERVL 142 489 -2 2180 118 0 7 chr20 12647579 12647883 -59505999 - AluSx SINE Alu -10 302 1 219 182 23 0 chr20 12647929 12647973 -59505909 + CT-rich Low_complexity Low_complexity 4 48 0 294 252 7 14 chr20 12648006 12648145 -59505737 + CT-rich Low_complexity Low_complexity 3 140 0 210 329 52 118 chr20 12648709 12649056 -59504826 - L2 LINE L2 -14 3258 2935 428 294 89 20 chr20 12649572 12649718 -59504164 + MIR SINE MIR 30 185 -77 757 287 181 15 chr20 12649718 12650044 -59503838 - L2 LINE L2 -5 3308 3037 1861 178 31 31 chr20 12650044 12650432 -59503450 + MLT1B LTR MaLR 1 388 -2 757 287 181 15 chr20 12650432 12650863 -59503019 - L2 LINE L2 -276 3037 2418 696 278 126 25 chr20 12650886 12651203 -59502679 + L2 LINE L2 2957 3305 -8 198 103 0 0 chr20 12651209 12651238 -59502644 + (TGAA)n Simple_repeat Simple_repeat 4 32 0 2147 105 17 0 chr20 12651284 12651578 -59502304 + AluSp SINE Alu 1 299 -14 1793 56 0 0 chr20 12651666 12651881 -59502001 - AluY SINE Alu -4 307 93 23 33 0 0 chr20 12652789 12652819 -59501063 + AT_rich Low_complexity Low_complexity 1 30 0 1805 163 26 23 chr20 12652881 12653225 -59500657 - MLT1A1 LTR MaLR -4 361 17 21 0 0 0 chr20 12653818 12653839 -59500043 + AT_rich Low_complexity Low_complexity 1 21 0 327 49 0 0 chr20 12653948 12653989 -59499893 + (CA)n Simple_repeat Simple_repeat 1 41 0 1478 214 69 6 chr20 12654134 12654567 -59499315 - MER89 LTR ERV1 0 559 1 343 232 116 98 chr20 12756960 12757184 -59396698 - MLT1H LTR MaLR -5 544 317 398 176 220 0 chr20 12757207 12757298 -59396584 - MLT1H LTR MaLR -30 519 409 2255 247 86 9 chr20 12757298 12757845 -59396037 - MLT1E LTR MaLR 0 593 5 545 337 66 0 chr20 12758647 12758813 -59395069 + MER5B DNA MER1_type 1 177 -1 301 331 25 8 chr20 12758985 12759106 -59394776 - MIR3 SINE MIR -41 167 45 1043 189 26 9 chr20 12759393 12759621 -59394261 - L1MC3 LINE L1 0 7785 7554 2936 146 4 4 chr20 12759635 12760087 -59393795 - L1PA16 LINE L1 -9 6157 5706 2642 193 45 7 chr20 12760394 12760932 -59392950 + MER74A LTR ERVL 1 558 0 397 262 0 0 chr20 12760933 12761017 -59392865 - MER5A DNA MER1_type -104 85 2 306 241 0 0 chr20 12761362 12761443 -59392439 + MIR SINE MIR 79 139 -69 1754 181 66 14 chr20 12761443 12761789 -59392093 - MLT1A1 LTR MaLR 0 365 1 334 223 58 48 chr20 12761789 12761892 -59391990 + MIR SINE MIR 159 262 0 308 235 37 0 chr20 12762848 12762929 -59390953 - MER112 DNA MER1_type -62 198 115 231 36 0 0 chr20 12762929 12762957 -59390925 + (TG)n Simple_repeat Simple_repeat 2 29 0 636 219 42 26 chr20 12763074 12763266 -59390616 - MER113 DNA MER1_type? -76 445 251 421 58 92 0 chr20 12763811 12763931 -59389951 + (TA)n Simple_repeat Simple_repeat 2 132 0 216 250 0 19 chr20 12764939 12764991 -59388891 + C-rich Low_complexity Low_complexity 5 55 0 666 143 0 254 chr20 12765682 12765794 -59388088 + MER5A DNA MER1_type 2 16 -173 2131 121 7 0 chr20 12765794 12766084 -59387798 - AluSx SINE Alu -20 292 1 666 143 0 254 chr20 12766084 12766223 -59387659 + MER5A DNA MER1_type 16 189 0 256 326 82 0 chr20 12767779 12767877 -59386005 - MIR3 SINE MIR -21 187 82 25 31 0 0 chr20 12768235 12768267 -59385615 + AT_rich Low_complexity Low_complexity 1 32 0 379 295 48 19 chr20 12768282 12768550 -59385332 - L1MC5 LINE L1 -68 7893 7618 1853 155 3 7 chr20 12769559 12769856 -59384026 - AluJb SINE Alu -16 296 1 255 224 32 80 chr20 12770319 12770444 -59383438 + MER5A DNA MER1_type 8 126 -63 * 844 219 11 11 chr20 12770336 12770519 -59383363 - MER5A DNA MER1_type -6 183 1 231 322 99 16 chr20 12771821 12771942 -59381940 - MIR3 SINE MIR -3 205 75 816 200 32 16 chr20 12772779 12772964 -59380918 + MER5A DNA MER1_type 1 188 -1 334 352 16 0 chr20 12773362 12773487 -59380395 + MIR SINE MIR 31 157 -105 1708 258 117 23 chr20 12773707 12773922 -59379960 - L1ME3A LINE L1 -13 6157 5964 234 0 0 0 chr20 12773922 12773948 -59379934 + (TG)n Simple_repeat Simple_repeat 1 26 0 1708 258 117 23 chr20 12773948 12774630 -59379252 - L1ME3A LINE L1 -206 5964 5177 625 220 21 5 chr20 12774641 12774827 -59379055 - MER53 DNA DNA 0 189 1 243 88 0 0 chr20 12774839 12774873 -59379009 + (T)n Simple_repeat Simple_repeat 1 34 0 211 226 45 34 chr20 12775486 12775663 -59378219 + (TA)n Simple_repeat Simple_repeat 1 179 0 * 262 331 0 0 chr20 12775536 12775705 -59378177 + (ATG)n Simple_repeat Simple_repeat 1 169 0 808 219 19 0 chr20 12776205 12776360 -59377522 + MER5A DNA MER1_type 10 167 -22 207 261 0 0 chr20 12776394 12776440 -59377442 - MER5A DNA MER1_type -1 188 143 279 0 0 0 chr20 12776665 12776696 -59377186 + (CA)n Simple_repeat Simple_repeat 2 32 0 234 0 0 0 chr20 12777126 12777152 -59376730 + (ATG)n Simple_repeat Simple_repeat 2 27 0 529 312 50 23 chr20 12777161 12777379 -59376503 - MIR SINE MIR -18 244 21 638 291 153 35 chr20 12777506 12777997 -59375885 + MLT1H LTR MaLR 1 549 0 384 185 22 43 chr20 12780237 12780329 -59373553 + MIR SINE MIR 100 189 -73 297 286 34 75 chr20 12780503 12780650 -59373232 + L2 LINE L2 2911 3051 -221 238 313 173 7 chr20 12780911 12781061 -59372821 - MIR3 SINE MIR -4 204 30 563 308 60 95 chr20 12781137 12781718 -59372164 + MLT1K LTR MaLR 28 588 0 653 304 17 0 chr20 12782098 12782279 -59371603 - MIR SINE MIR -11 251 68 249 302 105 12 chr20 12782285 12782371 -59371511 - MIR SINE MIR -152 110 17 753 221 7 7 chr20 12782406 12782546 -59371336 + MER5A DNA MER1_type 16 155 -34 1245 260 0 54 chr20 12782546 12782950 -59370932 + MER1B DNA MER1_type 1 339 0 559 243 46 35 chr20 12783336 12783447 -59370435 + MER5B DNA MER1_type 4 120 -58 2178 104 0 0 chr20 12783447 12783759 -59370123 - AluSc SINE Alu 0 312 1 559 243 46 35 chr20 12783759 12783819 -59370063 + MER5B DNA MER1_type 120 178 0 1506 234 123 5 chr20 12784468 12784917 -59368965 + MLT1H LTR MaLR 40 541 -8 24 53 0 0 chr20 12784941 12784979 -59368903 + AT_rich Low_complexity Low_complexity 1 38 0 23 0 0 0 chr20 12785779 12785802 -59368080 + AT_rich Low_complexity Low_complexity 1 23 0 308 345 86 7 chr20 12786075 12786214 -59367668 + MIR3 SINE MIR 34 183 -25 736 255 123 23 chr20 12787230 12787579 -59366303 - L1ME3A LINE L1 -6 6164 5781 594 219 152 6 chr20 12789585 12789749 -59364133 + MER5A DNA MER1_type 1 188 -1 207 191 24 0 chr20 12789820 12789862 -59364020 + CT-rich Low_complexity Low_complexity 3 45 0 1430 209 71 145 chr20 12790531 12790653 -59363229 - L1ME2 LINE L1 -9 6155 6025 810 197 7 7 chr20 12790653 12790800 -59363082 - FRAM SINE Alu -16 150 4 1430 209 71 145 chr20 12790800 12791036 -59362846 - L1ME2 LINE L1 -139 6025 5773 648 162 0 52 chr20 12791036 12791172 -59362710 - L1PA13 LINE L1 -1 6162 6034 1430 209 71 145 chr20 12791172 12791591 -59362291 - L1ME2 LINE L1 -391 5773 5435 397 106 15 0 chr20 12791885 12791951 -59361931 - MLT1D LTR MaLR 0 505 439 2528 113 8 0 chr20 12791988 12792358 -59361524 - L1PA13 LINE L1 0 6163 5791 1340 234 69 28 chr20 12792358 12792793 -59361089 - MLT1D LTR MaLR -52 453 1 414 234 60 98 chr20 12793063 12793278 -59360604 + MLT1H LTR MaLR 60 265 -144 234 222 0 111 chr20 12793354 12793462 -59360420 + MLT1I LTR MaLR 316 409 0 2359 75 14 0 chr20 12795732 12796026 -59357856 - AluSp SINE Alu -13 300 3 418 213 110 0 chr20 12796307 12796443 -59357439 + LTR33A LTR ERVL 373 523 0 298 405 15 8 chr20 12796474 12796605 -59357277 - MIR SINE MIR -129 133 2 1074 249 100 57 chr20 12796927 12797515 -59356367 + MLT1F LTR MaLR 2 538 -4 255 316 46 52 chr20 12797641 12797815 -59356067 - LTR33 LTR ERVL -237 284 112 241 250 0 0 chr20 12799152 12799204 -59354678 + L2 LINE L2 3261 3312 -1 338 294 62 12 chr20 12799762 12799922 -59353960 - MIR SINE MIR -13 249 82 309 341 102 63 chr20 12800780 12801527 -59352355 + L2 LINE L2 2256 3072 -200 209 278 0 0 chr20 12801527 12801581 -59352301 + L2 LINE L2 3210 3263 -9 2730 177 16 57 chr20 12801637 12802270 -59351612 + LTR9 LTR ERV1 1 607 -5 23 33 0 0 chr20 12803342 12803372 -59350510 + AT_rich Low_complexity Low_complexity 1 30 0 307 235 0 12 chr20 12804739 12804820 -59349062 - L1ME3A LINE L1 -10 6160 6081 372 274 12 30 chr20 12805586 12805750 -59348132 + A-rich Low_complexity Low_complexity 1 161 0 6251 201 21 18 chr20 12805753 12805923 -59347959 + L1PB4 LINE L1 3690 3858 -2288 2484 33 0 13 chr20 12805923 12806222 -59347660 + AluSg SINE Alu 1 295 -15 6251 201 21 18 chr20 12806222 12807540 -59346342 + L1PB4 LINE L1 3858 5182 -964 22 35 0 0 chr20 12807540 12807569 -59346313 + AT_rich Low_complexity Low_complexity 1 29 0 349 91 97 6 chr20 12807569 12807734 -59346148 + (TA)n Simple_repeat Simple_repeat 1 180 0 390 230 93 14 chr20 12807738 12807877 -59346005 + L1PB4 LINE L1 5191 5340 -806 637 314 67 21 chr20 12808474 12808850 -59345032 - LTR16C LTR ERVL 0 491 99 555 233 259 11 chr20 12809133 12809322 -59344560 - MIR SINE MIR -12 250 15 1180 280 87 3 chr20 12809408 12809765 -59344117 + MLT1F LTR MaLR 1 387 -155 2302 218 74 40 chr20 12809765 12810650 -59343232 + L1ME2 LINE L1 4463 5375 -787 1279 221 13 93 chr20 12810650 12811048 -59342834 + MLT1A2 LTR MaLR 1 366 -8 1149 247 3 18 chr20 12811054 12811382 -59342500 + L1ME2 LINE L1 5369 5691 -473 * 1667 180 21 0 chr20 12811378 12811706 -59342176 + L1PB4 LINE L1 5784 6118 -38 2244 102 0 19 chr20 12811711 12812026 -59341856 + AluSc SINE Alu 1 309 0 1054 251 111 26 chr20 12812100 12812523 -59341359 + L1ME2 LINE L1 5698 6156 -8 2127 92 0 76 chr20 12813099 12813427 -59340455 - AluSq SINE Alu -10 303 1 279 235 0 0 chr20 12813596 12813647 -59340235 + L2 LINE L2 3212 3262 -51 292 219 0 16 chr20 12813664 12813728 -59340154 - MIR SINE MIR -65 143 81 3116 166 9 5 chr20 12813730 12814292 -59339590 + L1MB3 LINE L1 5618 6181 -2 1893 151 83 6 chr20 12814328 12814665 -59339217 + MLT1A1 LTR MaLR 1 363 -2 770 172 41 53 chr20 12814894 12815063 -59338819 - MER5B DNA MER1_type -1 177 11 373 315 125 16 chr20 12815261 12815445 -59338437 + MIR SINE MIR 7 210 -52 312 27 0 0 chr20 12815662 12815699 -59338183 + (TG)n Simple_repeat Simple_repeat 1 37 0 483 159 30 76 chr20 12817394 12817526 -59336356 - L1MA9 LINE L1 -104 6208 6083 458 184 29 0 chr20 12817531 12817634 -59336248 + L1MB1 LINE L1 5765 5870 -319 343 201 49 49 chr20 12817665 12817809 -59336073 - L1MC5 LINE L1 -284 7677 7534 233 370 31 24 chr20 12817898 12818025 -59335857 + L2 LINE L2 3186 3313 0 593 129 0 0 chr20 12820150 12820235 -59333647 + L1PB4 LINE L1 6059 6143 -13 191 391 0 22 chr20 12820437 12820527 -59333355 + MIR3 SINE MIR 9 96 -112 269 209 275 0 chr20 12820527 12820618 -59333264 - MER5A DNA MER1_type 0 189 74 239 298 182 0 chr20 12820663 12820784 -59333098 + MIR SINE MIR 88 230 -32 264 303 22 11 chr20 12820825 12820914 -59332968 - MIR3 SINE MIR 0 208 119 26 0 0 0 chr20 12821109 12821135 -59332747 + AT_rich Low_complexity Low_complexity 1 26 0 658 263 13 0 chr20 12822357 12822513 -59331369 + MLT1H LTR MaLR 101 258 -291 223 114 45 0 chr20 12822807 12822851 -59331031 + (TCCA)n Simple_repeat Simple_repeat 4 49 0 243 216 0 0 chr20 12822866 12822917 -59330965 + MLT1H LTR MaLR 485 535 -14 282 301 181 14 chr20 12823290 12823463 -59330419 - MIR SINE MIR -46 216 20 294 95 0 0 chr20 12823494 12823536 -59330346 + (GAA)n Simple_repeat Simple_repeat 2 43 0 182 260 0 20 chr20 12823633 12823683 -59330199 - L2 LINE L2 -10 3262 3214 429 344 71 34 chr20 12823903 12824284 -59329598 + LTR16C LTR ERVL 97 491 0 20140 106 13 12 chr20 12826140 12829958 -59323924 + L1PA7 LINE L1 2325 6154 0 1943 191 19 12 chr20 12830412 12830830 -59323052 - MER61C LTR ERV1 0 434 14 432 285 177 0 chr20 12832638 12832768 -59321114 + MER5A DNA MER1_type 31 183 -6 2016 222 89 55 chr20 12833018 12833649 -59320233 - MLT1E1 LTR MaLR 0 654 3 231 250 15 15 chr20 12833650 12833718 -59320164 + (CATATA)n Simple_repeat Simple_repeat 3 70 0 761 252 61 35 chr20 12833758 12834214 -59319668 + MER113 DNA MER1_type? 2 469 -52 401 247 128 13 chr20 12834841 12835185 -59318697 + LTR33 LTR ERVL 112 510 -11 329 271 78 0 chr20 12836210 12836331 -59317551 - MER113 DNA MER1_type? -43 478 348 255 341 28 28 chr20 12836331 12836510 -59317372 + HsTC2 DNA Tc2 1 179 -1719 * 560 225 6 17 chr20 12836509 12836682 -59317200 + HsTC2 DNA Tc2 1723 1893 -5 345 269 58 19 chr20 12836832 12836936 -59316946 + MIR SINE MIR 85 192 -70 35 41 0 0 chr20 12837166 12837215 -59316667 + AT_rich Low_complexity Low_complexity 1 49 0 638 267 58 33 chr20 12838640 12838880 -59315002 + LTR16A1 LTR ERVL 147 392 -65 183 129 0 0 chr20 12838893 12838924 -59314958 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1286 145 9 22 chr20 12838934 12839161 -59314721 - L1PA16 LINE L1 -9 6157 5934 200 328 30 15 chr20 12839494 12839561 -59314321 - MIR SINE MIR -175 87 20 614 260 133 5 chr20 12840847 12841043 -59312839 + MIR SINE MIR 41 261 -1 352 326 145 31 chr20 12841316 12841543 -59312339 + MIR SINE MIR 7 259 -3 450 302 69 11 chr20 12842496 12842685 -59311197 - MIR SINE MIR 0 262 63 418 270 0 0 chr20 12842706 12842806 -59311076 + MER94 DNA DNA 1 100 -34 183 205 0 0 chr20 12842851 12842890 -59310992 + CT-rich Low_complexity Low_complexity 2 40 0 420 20 0 0 chr20 12843067 12843116 -59310766 + (TTCCC)n Simple_repeat Simple_repeat 5 53 0 898 147 6 11 chr20 12843236 12843413 -59310469 + CT-rich Low_complexity Low_complexity 3 178 0 693 296 49 42 chr20 12844325 12844612 -59309270 - LTR16C LTR ERVL -121 370 82 2262 90 7 3 chr20 12845496 12845796 -59308086 + AluSc SINE Alu 1 301 -8 244 265 0 59 chr20 12846310 12846378 -59307504 - L2 LINE L2 -1 3312 3249 816 320 14 46 chr20 12846812 12847162 -59306720 + MER115 DNA AcHobo 14 352 -341 23 0 0 0 chr20 12847434 12847457 -59306425 + AT_rich Low_complexity Low_complexity 1 23 0 909 247 122 67 chr20 12848082 12848515 -59305367 - LTR16A1 LTR ERVL 0 457 1 413 200 83 50 chr20 12850247 12850437 -59303445 + MLT1H LTR MaLR 319 520 -29 480 352 6 6 chr20 12851244 12851423 -59302459 + MIR3 SINE MIR 7 185 -23 476 168 32 0 chr20 12851541 12851636 -59302246 - MER5A DNA MER1_type -83 106 9 183 80 0 0 chr20 12852207 12852232 -59301650 + (T)n Simple_repeat Simple_repeat 1 25 0 255 279 0 0 chr20 12852508 12852569 -59301313 - Charlie8 DNA MER1_type 0 2417 2357 23 33 0 0 chr20 12852987 12853017 -59300865 + AT_rich Low_complexity Low_complexity 1 30 0 28 29 0 0 chr20 12853062 12853097 -59300785 + AT_rich Low_complexity Low_complexity 1 35 0 2134 65 0 95 chr20 12853814 12854151 -59299731 + AluYa8 SINE Alu 1 305 -5 2452 196 43 24 chr20 12854825 12855451 -59298431 - L1MC4 LINE L1 -148 7894 7257 2631 222 37 14 chr20 12855462 12856170 -59297712 - L1MC4a LINE L1 -6 7802 7079 405 194 10 10 chr20 12856175 12856273 -59297609 - L1MC4a LINE L1 -627 7181 7084 22 0 0 0 chr20 12856698 12856720 -59297162 + AT_rich Low_complexity Low_complexity 1 22 0 1059 255 72 33 chr20 12856745 12857164 -59296718 - MLT1J2 LTR MaLR -13 437 3 403 280 112 105 chr20 12859525 12860107 -59293775 + MLT1K LTR MaLR 3 588 0 520 302 79 5 chr20 12860806 12860995 -59292887 + MIR SINE MIR 54 256 -6 546 300 63 1 chr20 12861558 12861984 -59291898 - LTR33A LTR ERVL -1 522 66 675 207 71 47 chr20 12863790 12863959 -59289923 - MER5A DNA MER1_type 0 189 17 251 302 101 34 chr20 12864406 12864555 -59289327 + MIR SINE MIR 48 206 -56 6843 32 1 1 chr20 12865021 12865872 -59288010 - L1PA4 LINE L1 0 6155 5305 22 70 0 0 chr20 12865919 12865962 -59287920 + AT_rich Low_complexity Low_complexity 1 43 0 1000 217 40 33 chr20 12865990 12866294 -59287588 - L1ME3A LINE L1 -48 6122 5817 3790 155 54 10 chr20 12866475 12867199 -59286683 + L1PB3 LINE L1 5392 6147 -7 304 343 56 36 chr20 12867509 12867812 -59286070 - L1MEc LINE L1 -4726 1584 1276 2000 144 0 3 chr20 12867821 12868112 -59285770 - AluSx SINE Alu -20 292 3 270 275 8 25 chr20 12868159 12868279 -59285603 - L1MEc LINE L1 -4919 1200 1083 4070 166 25 53 chr20 12868290 12868878 -59285004 - L1MB7 LINE L1 -17 6167 5563 221 30 61 0 chr20 12868878 12868911 -59284971 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 1928 139 0 11 chr20 12868911 12869198 -59284684 - AluSx SINE Alu -28 284 1 4070 166 25 53 chr20 12869198 12870004 -59283878 - L1MB7 LINE L1 -619 5565 4833 419 278 144 45 chr20 12870497 12870850 -59283032 - MLT1H LTR MaLR -161 388 1 391 243 20 46 chr20 12870915 12871067 -59282815 + L1MC5 LINE L1 7782 7929 -32 2170 110 16 0 chr20 12873444 12873777 -59280105 - AluSq SINE Alu 0 338 1 35 54 0 0 chr20 12874839 12874895 -59278987 + AT_rich Low_complexity Low_complexity 1 56 0 225 0 0 0 chr20 12875000 12875025 -59278857 + (A)n Simple_repeat Simple_repeat 1 25 0 22 35 0 0 chr20 12875039 12875068 -59278814 + AT_rich Low_complexity Low_complexity 1 29 0 1848 140 31 67 chr20 12875077 12875435 -59278447 - MER46B DNA MER2_type -16 220 1 359 139 13 76 chr20 12875435 12875466 -59278416 + MER46A DNA MER2_type 145 170 -66 2119 180 46 59 chr20 12875551 12876007 -59277875 - MSTB2 LTR MaLR -7 450 1 1669 255 62 35 chr20 12876138 12876651 -59277231 - MLT1H LTR MaLR 0 549 23 336 350 106 25 chr20 12876784 12877218 -59276664 - L2 LINE L2 -664 2650 2182 242 304 54 9 chr20 12877425 12877537 -59276345 - MIR SINE MIR -14 248 132 213 337 117 17 chr20 12877743 12877872 -59276010 - MIR SINE MIR -62 146 6 429 299 89 6 chr20 12878570 12878727 -59275155 + MIR SINE MIR 64 233 -29 230 373 11 6 chr20 12878737 12878914 -59274968 + (TGG)n Simple_repeat Simple_repeat 3 180 0 198 143 0 0 chr20 12878968 12879003 -59274879 + (TGG)n Simple_repeat Simple_repeat 2 36 0 342 331 6 17 chr20 12879030 12879202 -59274680 + (TGG)n Simple_repeat Simple_repeat 1 170 0 398 230 0 7 chr20 12879240 12879379 -59274503 + (TGG)n Simple_repeat Simple_repeat 2 139 0 841 258 10 14 chr20 12880982 12881191 -59272691 - MIR SINE MIR -2 260 53 540 256 0 0 chr20 12882406 12882562 -59271320 + GA-rich Low_complexity Low_complexity 4 159 0 190 296 23 0 chr20 12882813 12882857 -59271025 - L3b LINE CR1 -22 1561 1517 252 146 0 0 chr20 12883119 12883160 -59270722 + L2 LINE L2 3262 3302 -11 1192 304 84 14 chr20 12884751 12885267 -59268615 - L2 LINE L2 -6 3307 2744 506 339 9 21 chr20 12885299 12885532 -59268350 - L2 LINE L2 -927 2387 2158 412 311 66 0 chr20 12886369 12886491 -59267391 + L2 LINE L2 3137 3266 -6 892 224 33 0 chr20 12887046 12887229 -59266653 - MER5A DNA MER1_type 0 189 1 468 298 0 8 chr20 12887230 12887351 -59266531 + MER5B DNA MER1_type 3 122 -56 497 238 175 0 chr20 12887500 12887660 -59266222 + MER5A DNA MER1_type 1 188 -1 518 282 77 0 chr20 12887698 12887854 -59266028 - MER5B DNA MER1_type 0 178 11 1222 263 62 7 chr20 12888139 12888447 -59265435 + MLT1H LTR MaLR 1 325 -224 614 260 47 6 chr20 12888578 12888747 -59265135 + MLT1H LTR MaLR 374 549 0 253 369 66 0 chr20 12889506 12889628 -59264254 - MIR SINE MIR -39 223 94 253 267 62 85 chr20 12889643 12889819 -59264063 - MLT1K LTR MaLR -18 570 399 299 299 35 11 chr20 12889928 12890015 -59263867 - MLT1K LTR MaLR -354 234 146 556 244 39 0 chr20 12890054 12890181 -59263701 - FLAM_A SINE Alu -1 132 1 23 68 0 0 chr20 12891386 12891430 -59262452 + AT_rich Low_complexity Low_complexity 1 44 0 261 0 0 0 chr20 12893743 12893772 -59260110 + (CA)n Simple_repeat Simple_repeat 2 30 0 530 293 143 57 chr20 12894102 12894577 -59259305 - LTR33 LTR ERVL -4 517 2 284 296 112 24 chr20 12894699 12894905 -59258977 - L2 LINE L2 -854 2460 2237 304 293 0 52 chr20 12897614 12897730 -59256152 - MIR SINE MIR -75 187 78 1890 137 18 31 chr20 12898358 12898739 -59255143 + L1MA7 LINE L1 5912 6287 -4 320 246 76 42 chr20 12899537 12899655 -59254227 - MIR SINE MIR -66 142 21 274 320 20 33 chr20 12899787 12899940 -59253942 + MARNA DNA Mariner 16 166 -420 644 319 151 12 chr20 12900055 12900400 -59253482 + L2 LINE L2 2921 3313 0 334 248 0 88 chr20 12900457 12900594 -59253288 - 7SK RNA RNA -68 125 1 536 308 46 17 chr20 12900607 12900847 -59253035 + MARNA DNA Mariner 171 417 -169 221 103 26 0 chr20 12902776 12902815 -59251067 - L2 LINE L2 -1 3312 3273 1435 175 22 121 chr20 12902926 12903331 -59250551 + MLT1A1 LTR MaLR 1 365 0 251 289 0 13 chr20 12904667 12904743 -59249139 + MIR3 SINE MIR 104 178 -30 378 42 0 0 chr20 12905799 12905847 -59248035 + (TG)n Simple_repeat Simple_repeat 2 49 0 315 0 0 0 chr20 12906580 12906615 -59247267 + (CA)n Simple_repeat Simple_repeat 2 36 0 252 314 178 18 chr20 12908358 12908527 -59245355 + LTR16C LTR ERVL 296 491 0 186 300 29 0 chr20 12908648 12908718 -59245164 - L2 LINE L2 -13 3259 3188 233 310 10 10 chr20 12909189 12909289 -59244593 - MER103 DNA DNA -12 154 55 537 298 68 34 chr20 12909669 12909874 -59244008 + MIR SINE MIR 28 239 -23 215 295 166 14 chr20 12909908 12910047 -59243835 + MIR SINE MIR 1 160 -102 216 67 0 0 chr20 12911497 12911527 -59242355 + (CAAA)n Simple_repeat Simple_repeat 3 32 0 211 315 47 82 chr20 12913140 12913372 -59240510 + MIR SINE MIR 32 255 -7 36 53 0 0 chr20 12913714 12913771 -59240111 + AT_rich Low_complexity Low_complexity 1 57 0 293 311 88 21 chr20 12914028 12914266 -59239616 - L1M4 LINE L1 -1967 4179 3926 27 81 0 0 chr20 12914280 12914342 -59239540 + AT_rich Low_complexity Low_complexity 1 62 0 698 228 72 8 chr20 12914786 12915023 -59238859 - L1MC4a LINE L1 -1867 5941 5690 323 295 74 0 chr20 12915084 12915179 -59238703 + L1MC/D LINE L1 5540 5641 -2167 339 280 91 55 chr20 12915739 12916014 -59237868 - HAL1 LINE L1 -17 2490 2206 30 93 0 0 chr20 12916014 12916100 -59237782 + AT_rich Low_complexity Low_complexity 1 86 0 217 340 0 0 chr20 12918664 12918714 -59235168 - MIR3 SINE MIR -40 168 119 314 250 29 0 chr20 12919052 12919119 -59234763 + Charlie4 DNA MER1_type 14 82 -1879 1275 164 132 9 chr20 12919119 12919542 -59234340 - LTR54 LTR ERV1 0 510 1 557 199 90 13 chr20 12919713 12919869 -59234013 + Charlie4 DNA MER1_type 1781 1948 -13 1637 194 10 7 chr20 12920107 12920416 -59233466 + AluJo SINE Alu 3 332 0 181 0 0 0 chr20 12920416 12920436 -59233446 + (A)n Simple_repeat Simple_repeat 1 180 0 22 0 0 0 chr20 12922772 12922794 -59231088 + AT_rich Low_complexity Low_complexity 1 22 0 2474 168 9 12 chr20 12922836 12923265 -59230617 - MSTC LTR MaLR 0 428 1 46 54 0 0 chr20 12923494 12923568 -59230314 + AT_rich Low_complexity Low_complexity 1 74 0 1162 188 68 19 chr20 12924358 12924667 -59229215 + MER33 DNA MER1_type 1 324 0 345 196 9 103 chr20 12924760 12924867 -59229015 + MIR SINE MIR 118 214 -48 288 292 44 0 chr20 12926211 12926313 -59227569 - MIR SINE MIR -62 146 60 452 307 108 21 chr20 12927017 12927304 -59226578 - LTR16C LTR ERVL -2 489 178 226 323 32 36 chr20 12927549 12927741 -59226141 - L2 LINE L2 -314 2958 2766 946 298 41 52 chr20 12927779 12928431 -59225451 + Charlie7 DNA MER1_type 79 723 -1889 288 234 11 32 chr20 12928484 12928578 -59225304 + (CATATA)n Simple_repeat Simple_repeat 4 95 0 530 274 102 28 chr20 12928587 12928802 -59225080 - LTR16C LTR ERVL -63 428 198 1403 186 8 8 chr20 12929148 12929401 -59224481 + AluJo SINE Alu 22 274 -38 515 170 0 9 chr20 12929409 12929515 -59224367 + GA-rich Low_complexity Low_complexity 1 105 0 2100 128 14 0 chr20 12929931 12930228 -59223654 + AluSx SINE Alu 3 303 -9 21 36 0 0 chr20 12930261 12930289 -59223593 + AT_rich Low_complexity Low_complexity 1 28 0 405 225 50 0 chr20 12930681 12930761 -59223121 - MER5A DNA MER1_type -84 105 22 448 248 209 0 chr20 12931591 12931720 -59222162 - MER5A DNA MER1_type -2 187 32 2328 157 21 23 chr20 12932338 12932771 -59221111 - MSTB1 LTR MaLR 0 432 1 6806 65 10 0 chr20 12932990 12934337 -59219545 + L1PA7 LINE L1 4787 6151 -3 27 0 0 0 chr20 12935276 12935303 -59218579 + AT_rich Low_complexity Low_complexity 1 27 0 360 265 8 8 chr20 12936283 12936400 -59217482 - L2 LINE L2 -1285 2029 1913 634 264 86 6 chr20 12936444 12936618 -59217264 + MER5A DNA MER1_type 1 188 -1 198 382 13 0 chr20 12937192 12937268 -59216614 - L3 LINE CR1 -613 964 888 195 299 90 0 chr20 12937457 12937524 -59216358 + MER5A DNA MER1_type 117 189 0 207 0 0 0 chr20 12937553 12937576 -59216306 + (TTA)n Simple_repeat Simple_repeat 2 24 0 320 260 123 26 chr20 12940592 12940746 -59213136 - MARNA DNA Mariner -224 362 194 192 107 0 0 chr20 12940806 12940834 -59213048 - L2 LINE L2 -535 2779 2752 569 296 89 37 chr20 12940841 12941378 -59212504 - L2 LINE L2 0 3313 2704 2305 176 38 5 chr20 12941401 12941845 -59212037 - L1PB4 LINE L1 0 6156 5698 767 216 38 0 chr20 12941851 12942036 -59211846 + L1 LINE L1 4873 5064 -1082 606 239 22 0 chr20 12942041 12942179 -59211703 - L2 LINE L2 -599 2715 2575 598 277 110 68 chr20 12942182 12942655 -59211227 - LTR33 LTR ERVL -1 520 28 1663 305 76 29 chr20 12943189 12943980 -59209902 - ERVL LTR ERVL -757 5007 4180 865 283 42 21 chr20 12944025 12944361 -59209521 - ERVL LTR ERVL -2360 3294 2952 491 173 0 0 chr20 12944412 12944493 -59209389 - LTR29 LTR ERV1 -66 556 476 443 292 43 86 chr20 12944782 12945039 -59208843 - ERVL LTR ERVL -3174 2590 2345 1767 136 13 84 chr20 12945051 12945361 -59208521 - AluSx SINE Alu -24 288 1 311 333 61 14 chr20 12945424 12945571 -59208311 - ERVL LTR ERVL -5076 688 535 21 0 0 0 chr20 12945707 12945728 -59208154 + AT_rich Low_complexity Low_complexity 1 21 0 232 295 9 48 chr20 12946024 12946129 -59207753 - LTR33 LTR ERVL -20 501 401 1338 273 95 69 chr20 12946343 12946467 -59207415 - L2 LINE L2 -636 2678 2559 1444 184 106 0 chr20 12946467 12946643 -59207239 - AluJb SINE Alu 0 312 93 423 0 0 0 chr20 12946643 12946690 -59207192 + (TTTA)n Simple_repeat Simple_repeat 1 47 0 1444 184 106 0 chr20 12946690 12946795 -59207087 - AluJb SINE Alu -219 93 1 1338 273 95 69 chr20 12946795 12947341 -59206541 - L2 LINE L2 -755 2559 1990 3127 177 26 25 chr20 12947343 12948070 -59205812 - L1PA16 LINE L1 -1131 5015 4288 3504 146 4 31 chr20 12948071 12948336 -59205546 + L1PA16 LINE L1 5034 5305 -861 2071 122 0 10 chr20 12948336 12948630 -59205252 + AluSx SINE Alu 1 291 -21 3504 146 4 31 chr20 12948630 12949175 -59204707 + L1PA16 LINE L1 5305 5828 -338 1994 137 0 22 chr20 12949186 12949500 -59204382 + AluSx SINE Alu 6 312 0 1286 149 64 4 chr20 12949505 12949740 -59204142 + L1PA16 LINE L1 5909 6157 -9 2190 300 84 13 chr20 12949761 12950582 -59203300 - L2 LINE L2 -1342 1972 1094 23 33 0 0 chr20 12950742 12950772 -59203110 + AT_rich Low_complexity Low_complexity 1 30 0 210 288 122 29 chr20 12951548 12951687 -59202195 - MIR SINE MIR 0 262 111 1434 162 22 0 chr20 12951689 12951950 -59201932 - AluJo SINE Alu 0 315 50 197 241 134 54 chr20 12952032 12952144 -59201738 + L2 LINE L2 3192 3312 -1 22 0 0 0 chr20 12952608 12952630 -59201252 + AT_rich Low_complexity Low_complexity 1 22 0 382 294 103 7 chr20 12954097 12954233 -59199649 + MIR3 SINE MIR 12 160 -48 1885 143 7 0 chr20 12954317 12954621 -59199261 + AluSx SINE Alu 1 306 0 22 0 0 0 chr20 12954624 12954646 -59199236 + AT_rich Low_complexity Low_complexity 1 22 0 1074 277 85 18 chr20 12954722 12955230 -59198652 - MLT1H LTR MaLR 0 549 1 183 114 0 0 chr20 12956258 12956293 -59197589 + (TTTC)n Simple_repeat Simple_repeat 2 36 0 456 247 0 0 chr20 12956739 12956824 -59197058 + MER5A DNA MER1_type 105 189 0 2208 97 10 0 chr20 12956906 12957196 -59196686 + AluSg SINE Alu 1 293 -17 189 350 90 10 chr20 12957612 12957712 -59196170 - MIR SINE MIR -126 136 29 204 261 0 0 chr20 12957795 12957841 -59196041 + L2 LINE L2 3261 3306 -7 1420 205 3 50 chr20 12958007 12958329 -59195553 + AluJo SINE Alu 1 307 -5 1082 224 23 0 chr20 12958341 12958605 -59195277 + L1MA4 LINE L1 6019 6288 -12 300 395 35 35 chr20 12959064 12959403 -59194479 + L2 LINE L2 2327 2665 -649 274 380 47 16 chr20 12959861 12959990 -59193892 + L2 LINE L2 3140 3272 0 331 261 6 48 chr20 12960206 12960371 -59193511 - HAL1 LINE L1 -106 2401 2244 1549 126 0 0 chr20 12960625 12960839 -59193043 - AluSg/x SINE Alu -13 297 84 7617 27 0 0 chr20 12960845 12962069 -59191813 - L1PA4 LINE L1 0 6155 4932 249 369 13 40 chr20 12963922 12964071 -59189811 + MIR3 SINE MIR 38 182 -26 268 279 0 0 chr20 12965156 12965224 -59188658 - L2 LINE L2 -4 3268 3201 1156 274 115 22 chr20 12965743 12965916 -59187966 - L1MEd LINE L1 -2690 3439 3284 252 0 0 0 chr20 12965916 12965944 -59187938 + (TC)n Simple_repeat Simple_repeat 1 28 0 1156 274 115 22 chr20 12965944 12965982 -59187900 - L1MEd LINE L1 -2845 3284 3251 1549 129 0 0 chr20 12965982 12966199 -59187683 - AluSg/x SINE Alu -21 289 73 1156 274 115 22 chr20 12966199 12966706 -59187176 - L1MEd LINE L1 -2878 3251 2653 203 0 37 0 chr20 12966897 12966924 -59186958 + (TTTTA)n Simple_repeat Simple_repeat 1 28 0 626 205 0 0 chr20 12966928 12967040 -59186842 - FRAM SINE Alu -46 130 19 249 293 57 53 chr20 12967181 12967464 -59186418 - L1MEd LINE L1 -4910 1209 926 24 53 0 0 chr20 12968108 12968146 -59185736 + AT_rich Low_complexity Low_complexity 1 38 0 542 346 91 0 chr20 12968321 12968564 -59185318 + L2 LINE L2 2388 2652 -662 26 64 0 0 chr20 12968773 12968820 -59185062 + AT_rich Low_complexity Low_complexity 1 47 0 261 314 58 48 chr20 12969254 12969563 -59184319 - L2 LINE L2 -611 2703 2392 652 343 73 50 chr20 12970901 12971774 -59182108 + L2 LINE L2 2132 3042 -230 1835 173 3 3 chr20 12971774 12971795 -59182087 - AluSx SINE Alu -5 307 287 367 23 0 0 chr20 12971795 12971838 -59182044 + (TTA)n Simple_repeat Simple_repeat 2 180 0 1835 173 3 3 chr20 12971838 12972123 -59181759 - AluSx SINE Alu -24 288 1 652 343 73 50 chr20 12972123 12972355 -59181527 + L2 LINE L2 3042 3267 -5 301 292 58 25 chr20 12972504 12972624 -59181258 - MIR3 SINE MIR -38 170 47 28 0 0 0 chr20 12972641 12972669 -59181213 + AT_rich Low_complexity Low_complexity 1 28 0 2090 113 3 7 chr20 12974012 12974294 -59179588 + AluSq SINE Alu 1 281 -32 960 53 0 0 chr20 12974294 12974425 -59179457 + (GAA)n Simple_repeat Simple_repeat 2 132 0 758 309 33 52 chr20 12974439 12974537 -59179345 - MLT1K LTR MaLR -87 501 403 2035 117 7 3 chr20 12974537 12974723 -59179159 - AluSx SINE Alu 0 312 122 222 37 0 0 chr20 12974723 12974750 -59179132 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2035 117 7 3 chr20 12974750 12974873 -59179009 - AluSx SINE Alu -190 122 1 758 309 33 52 chr20 12974873 12975140 -59178742 - MLT1K LTR MaLR -185 403 143 180 329 63 0 chr20 12977128 12977207 -59176675 - MIR SINE MIR -109 153 70 1809 170 0 3 chr20 12977408 12977702 -59176180 + AluSx SINE Alu 15 307 -5 194 203 0 34 chr20 12979253 12979312 -59174570 + GA-rich Low_complexity Low_complexity 4 60 0 544 292 65 6 chr20 12980318 12980486 -59173396 + MIR SINE MIR 13 190 -72 301 245 21 115 chr20 12980837 12981029 -59172853 + L2 LINE L2 3013 3186 -127 736 283 177 24 chr20 12981370 12981823 -59172059 - MLT1H LTR MaLR -21 528 7 237 65 0 0 chr20 12983286 12983350 -59170532 + (TG)n Simple_repeat Simple_repeat 1 95 0 237 65 0 0 chr20 12983350 12983381 -59170501 + (TG)n Simple_repeat Simple_repeat 1 31 0 203 330 34 72 chr20 12984156 12984335 -59169547 - MIR3 SINE MIR -63 145 10 488 252 44 7 chr20 12984813 12984948 -59168934 + MIR SINE MIR 73 212 -50 208 186 70 0 chr20 12985064 12985107 -59168775 - MIR SINE MIR -6 256 211 216 0 0 0 chr20 12985774 12985798 -59168084 + (TG)n Simple_repeat Simple_repeat 2 25 0 26 0 0 0 chr20 12985902 12985928 -59167954 + AT_rich Low_complexity Low_complexity 1 26 0 180 111 0 0 chr20 12986452 12986479 -59167403 + (T)n Simple_repeat Simple_repeat 1 27 0 1249 237 50 0 chr20 12986753 12987070 -59166812 - MER58B DNA MER1_type -8 333 1 393 317 154 35 chr20 12987071 12987383 -59166499 + L2 LINE L2 2216 2564 -750 423 0 0 0 chr20 12987448 12987495 -59166387 + (TG)n Simple_repeat Simple_repeat 1 47 0 1882 139 15 0 chr20 12987497 12987771 -59166111 - AluSq SINE Alu -35 278 1 521 308 70 78 chr20 12987879 12988507 -59165375 + L2 LINE L2 2643 3268 -4 322 334 40 74 chr20 12989369 12989692 -59164190 - MLT1I LTR MaLR 0 409 98 1012 132 76 36 chr20 12990566 12990816 -59163066 + L1MA9 LINE L1 6043 6302 -10 3928 181 78 50 chr20 12991108 12991769 -59162113 + MER21A LTR ERV1 8 702 -229 2349 77 27 55 chr20 12991769 12992134 -59161748 + L1PA10 LINE L1 5806 6160 -8 3928 181 78 50 chr20 12992134 12992371 -59161511 + MER21A LTR ERV1 702 931 0 33 0 0 0 chr20 12993082 12993115 -59160767 + AT_rich Low_complexity Low_complexity 1 33 0 256 250 148 23 chr20 12993139 12993227 -59160655 - L2 LINE L2 0 3313 3215 21 57 0 0 chr20 12993317 12993352 -59160530 + AT_rich Low_complexity Low_complexity 1 35 0 8993 205 58 20 chr20 12993392 12993979 -59159903 + L1MC3 LINE L1 5408 5972 -1813 189 0 0 0 chr20 12993979 12994000 -59159882 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 8993 205 58 20 chr20 12994000 12994974 -59158908 + L1MC3 LINE L1 5972 6908 -877 270 116 0 0 chr20 12994974 12995017 -59158865 + (TAAA)n Simple_repeat Simple_repeat 4 46 0 8993 205 58 20 chr20 12995017 12995377 -59158505 + L1MC3 LINE L1 6908 7253 -532 2293 116 0 0 chr20 12995377 12995680 -59158202 + AluSx SINE Alu 1 303 -9 8993 205 58 20 chr20 12995680 12996031 -59157851 + L1MC3 LINE L1 7253 7767 -18 1030 280 111 18 chr20 12996057 12996507 -59157375 + MLT1H LTR MaLR 58 549 0 393 350 102 9 chr20 12996948 12997271 -59156611 + MLT1I LTR MaLR 57 409 0 223 195 0 0 chr20 12997484 12997525 -59156357 + (TTTA)n Simple_repeat Simple_repeat 1 41 0 2337 128 11 22 chr20 12997635 12998003 -59155879 - THE1B LTR MaLR 0 364 1 218 371 69 9 chr20 13000352 13000468 -59153414 - MER5A DNA MER1_type -12 177 55 24 0 0 0 chr20 13000470 13000494 -59153388 + AT_rich Low_complexity Low_complexity 1 24 0 1578 273 25 2 chr20 13000977 13001409 -59152473 - LTR16C LTR ERVL -18 473 32 2196 125 0 6 chr20 13001952 13002322 -59151560 + AluSx SINE Alu 1 368 0 24 77 0 0 chr20 13002356 13002408 -59151474 + AT_rich Low_complexity Low_complexity 1 52 0 1574 264 55 27 chr20 13004859 13005498 -59148384 - L1ME3A LINE L1 -52 6118 5462 224 278 0 0 chr20 13005843 13005897 -59147985 + (CAA)n Simple_repeat Simple_repeat 1 54 0 225 108 0 0 chr20 13006787 13006824 -59147058 + (T)n Simple_repeat Simple_repeat 1 37 0 210 37 0 0 chr20 13006980 13007007 -59146875 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 240 86 0 0 chr20 13007538 13007573 -59146309 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 907 167 13 0 chr20 13007593 13007743 -59146139 + FRAM SINE Alu 23 174 -2 518 336 38 38 chr20 13008993 13009308 -59144574 + L2 LINE L2 2998 3312 -1 636 304 88 25 chr20 13010086 13010369 -59143513 + LTR16C LTR ERVL 191 491 0 731 213 136 102 chr20 13010801 13011242 -59142640 + LTR16A1 LTR ERVL 1 456 -1 200 94 31 0 chr20 13011844 13011876 -59142006 + CT-rich Low_complexity Low_complexity 2 34 0 1498 229 116 25 chr20 13012145 13012685 -59141197 + L1ME3A LINE L1 5584 6163 -7 473 296 82 0 chr20 13013008 13013167 -59140715 - MIR3 SINE MIR -1 207 36 290 310 76 13 chr20 13013574 13013732 -59140150 - MER5B DNA MER1_type 0 178 11 244 185 25 37 chr20 13014374 13014392 -59139490 + (TTAA)n Simple_repeat Simple_repeat 4 21 -62 2130 119 0 24 chr20 13014392 13014686 -59139196 + AluSq SINE Alu 1 287 -26 244 185 25 37 chr20 13014686 13014748 -59139134 + (TTAA)n Simple_repeat Simple_repeat 21 83 0 214 182 73 0 chr20 13014795 13014850 -59139032 - L2 LINE L2 -90 3223 3165 2116 136 3 3 chr20 13015075 13015383 -59138499 + AluSx SINE Alu 1 308 -4 225 356 11 11 chr20 13015613 13015700 -59138182 - MIR SINE MIR -69 139 53 428 234 28 9 chr20 13016959 13017066 -59136816 + MER5A DNA MER1_type 2 110 -79 548 319 94 4 chr20 13017846 13018081 -59135801 - MIR SINE MIR 0 262 7 354 269 126 63 chr20 13018524 13018747 -59135135 + MIR SINE MIR 24 260 -2 318 50 0 0 chr20 13019453 13019493 -59134389 + (TG)n Simple_repeat Simple_repeat 2 41 0 1382 207 0 0 chr20 13019573 13019819 -59134063 + AluJo SINE Alu 1 246 -66 255 31 0 0 chr20 13019819 13019851 -59134031 + (CAAAAA)n Simple_repeat Simple_repeat 3 34 0 427 271 130 38 chr20 13021889 13022151 -59131731 - MLT1H LTR MaLR -259 290 5 676 187 105 0 chr20 13022544 13022715 -59131167 + MER53 DNA DNA 1 189 0 33 0 0 0 chr20 13023330 13023363 -59130519 + AT_rich Low_complexity Low_complexity 1 33 0 25 31 0 0 chr20 13023684 13023716 -59130166 + AT_rich Low_complexity Low_complexity 1 32 0 192 326 51 41 chr20 13024343 13024441 -59129441 - L2 LINE L2 -23 3249 3151 237 324 59 15 chr20 13025400 13025530 -59128352 + MIR SINE MIR 28 132 -76 23 0 0 0 chr20 13025820 13025843 -59128039 + AT_rich Low_complexity Low_complexity 1 23 0 21669 134 14 78 chr20 13025908 13030267 -59123615 + L1PA7 LINE L1 9 4085 -2061 180 97 0 0 chr20 13030274 13030305 -59123577 + (CAGA)n Simple_repeat Simple_repeat 4 34 0 9480 85 3 0 chr20 13030342 13032415 -59121467 + L1PA7 LINE L1 4072 6151 -3 354 296 16 16 chr20 13033202 13033327 -59120555 + MER5A DNA MER1_type 8 132 -57 505 222 161 43 chr20 13033956 13034118 -59119764 + MER5A DNA MER1_type 9 189 0 1068 261 96 58 chr20 13035348 13035746 -59118136 - LTR16C LTR ERVL -8 483 71 553 300 172 58 chr20 13035925 13037028 -59116854 + L2 LINE L2 1983 3197 -75 1372 195 59 72 chr20 13037260 13037634 -59116248 - MLT1B LTR MaLR 0 390 22 22 35 0 0 chr20 13038088 13038117 -59115765 + AT_rich Low_complexity Low_complexity 1 29 0 189 74 0 0 chr20 13038303 13038330 -59115552 + (TTTCC)n Simple_repeat Simple_repeat 2 28 0 26 0 0 0 chr20 13038743 13038769 -59115113 + AT_rich Low_complexity Low_complexity 1 26 0 22 0 0 0 chr20 13039005 13039027 -59114855 + AT_rich Low_complexity Low_complexity 1 22 0 1169 240 71 45 chr20 13040146 13040571 -59113311 + LTR16A1 LTR ERVL 3 438 -19 21 0 0 0 chr20 13040801 13040822 -59113060 + AT_rich Low_complexity Low_complexity 1 21 0 355 329 14 14 chr20 13040930 13041076 -59112806 + GA-rich Low_complexity Low_complexity 3 148 0 231 422 54 5 chr20 13041603 13041788 -59112094 - MIR SINE MIR -20 242 49 213 355 0 26 chr20 13042440 13042516 -59111366 + L3 LINE CR1 1499 1572 -5 21 36 0 0 chr20 13042669 13042697 -59111185 + AT_rich Low_complexity Low_complexity 1 28 0 68 55 0 0 chr20 13043108 13043218 -59110664 + AT_rich Low_complexity Low_complexity 1 110 0 343 307 108 47 chr20 13045258 13045470 -59108412 - MIR SINE MIR -17 245 21 375 306 0 21 chr20 13045595 13045739 -59108143 + L1MC4a LINE L1 5696 5836 -1972 333 0 0 0 chr20 13046408 13046445 -59107437 + (TG)n Simple_repeat Simple_repeat 2 38 0 21 36 0 0 chr20 13047331 13047359 -59106523 + AT_rich Low_complexity Low_complexity 1 28 0 209 252 8 24 chr20 13048614 13048737 -59105145 + CT-rich Low_complexity Low_complexity 2 122 0 321 26 0 0 chr20 13048788 13048826 -59105056 + (CA)n Simple_repeat Simple_repeat 1 38 0 355 333 138 5 chr20 13048826 13049021 -59104861 - MIR SINE MIR -14 248 28 295 298 51 75 chr20 13049067 13049359 -59104523 + L1ME LINE L1 5406 5690 -431 413 290 68 46 chr20 13049458 13049589 -59104293 - L1ME3A LINE L1 -1 6169 6042 1537 97 0 5 chr20 13049589 13049795 -59104087 + AluY SINE Alu 104 308 -3 413 290 68 46 chr20 13049795 13050690 -59103192 - L1ME3A LINE L1 -128 6042 4917 289 346 13 0 chr20 13050868 13051024 -59102858 + (CCCTAA)n Simple_repeat Simple_repeat 5 162 0 435 239 58 13 chr20 13051162 13051317 -59102565 - L1ME3A LINE L1 -3381 2765 2604 637 273 108 60 chr20 13051556 13051871 -59102011 + MLT1H LTR MaLR 220 549 0 988 238 68 57 chr20 13051937 13052307 -59101575 - MLT1A2 LTR MaLR 0 374 1 23 0 0 0 chr20 13053066 13053089 -59100793 + AT_rich Low_complexity Low_complexity 1 23 0 253 265 199 15 chr20 13053372 13053508 -59100374 + MIR SINE MIR 28 188 -74 1978 148 9 6 chr20 13053965 13054302 -59099580 - L1MB3 LINE L1 -47 6372 6035 4674 232 53 20 chr20 13054311 13055824 -59098058 - L1MB3 LINE L1 -1016 5366 3616 944 250 44 24 chr20 13055796 13056282 -59097600 - L1MB3 LINE L1 -4050 2334 1747 * 266 293 0 13 chr20 13056304 13056379 -59097503 - MIR SINE MIR -140 122 49 203 286 0 14 chr20 13056524 13056594 -59097288 + (TAA)n Simple_repeat Simple_repeat 2 70 0 25 0 0 0 chr20 13056881 13056906 -59096976 + AT_rich Low_complexity Low_complexity 1 25 0 495 315 79 0 chr20 13057523 13057688 -59096194 + L2 LINE L2 2433 2610 -704 4854 143 55 22 chr20 13057703 13058241 -59095641 - L1MA10 LINE L1 -7 6327 5745 396 0 0 0 chr20 13058241 13058285 -59095597 + (TG)n Simple_repeat Simple_repeat 2 45 0 4854 143 55 22 chr20 13058285 13058647 -59095235 - L1MA10 LINE L1 -589 5745 5397 2637 93 6 105 chr20 13058647 13059148 -59094734 + L1PB1 LINE L1 5695 6150 -1 3161 201 26 15 chr20 13059191 13059917 -59093965 + L1 LINE L1 4663 5396 -750 681 337 69 33 chr20 13059917 13060446 -59093436 + L2 LINE L2 2601 3156 -157 764 247 22 6 chr20 13060454 13060632 -59093250 + MER5A DNA MER1_type 9 189 0 590 277 28 21 chr20 13060663 13060804 -59093078 + L2 LINE L2 3172 3313 0 233 254 17 0 chr20 13060917 13060976 -59092906 - L1ME1 LINE L1 -110 6056 5997 574 160 0 0 chr20 13060980 13061086 -59092796 + L1MA8 LINE L1 6073 6178 -113 2335 204 33 95 chr20 13061098 13062171 -59091711 - L1ME1 LINE L1 -167 5999 5007 272 279 12 35 chr20 13063916 13064002 -59089880 - MIR SINE MIR -113 149 66 513 289 90 45 chr20 13064055 13064321 -59089561 - MLT1I LTR MaLR -31 378 101 244 337 22 11 chr20 13064328 13064420 -59089462 - L2 LINE L2 -189 3083 2991 301 300 209 5 chr20 13065281 13065632 -59088250 - LTR50 LTR ERVL 0 795 326 283 270 31 44 chr20 13065646 13065751 -59088131 + MER5A DNA MER1_type 59 155 -23 609 198 16 115 chr20 13066227 13066409 -59087473 + MLT1H LTR MaLR 1 164 -385 2297 170 40 2 chr20 13066424 13066853 -59087029 + L1MB3 LINE L1 5731 6175 -8 486 204 88 0 chr20 13066963 13067110 -59086772 + LTR37A LTR ERV1 92 251 -175 3795 195 23 50 chr20 13067166 13068824 -59085058 - L1MB7 LINE L1 -11 6173 4562 348 213 31 16 chr20 13068824 13068951 -59084931 + LTR37A LTR ERV1 298 426 0 678 331 75 68 chr20 13068956 13069690 -59084192 + L2 LINE L2 2113 2851 -463 781 287 79 53 chr20 13070066 13070421 -59083461 - MLT1K LTR MaLR -35 553 190 514 100 0 0 chr20 13070466 13070536 -59083346 + Alu SINE Alu 228 297 -15 236 304 0 29 chr20 13070636 13070705 -59083177 + L2 LINE L2 3205 3271 -1 398 350 35 15 chr20 13070775 13070980 -59082902 + MIR SINE MIR 37 244 -18 272 102 20 0 chr20 13071155 13071204 -59082678 + (GA)n Simple_repeat Simple_repeat 1 50 0 329 330 81 17 chr20 13073185 13073358 -59080524 + MLT1J2 LTR MaLR 213 396 -54 198 0 0 0 chr20 13073397 13073419 -59080463 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 290 380 53 12 chr20 13073589 13073760 -59080122 + MIR SINE MIR 5 182 -80 285 301 97 19 chr20 13074391 13074494 -59079388 + L2 LINE L2 3119 3229 -43 436 301 14 42 chr20 13074664 13074807 -59079075 + MER5A DNA MER1_type 47 185 -4 1512 187 12 22 chr20 13075673 13075994 -59077888 - L1MB8 LINE L1 -6 6172 5855 7137 238 46 29 chr20 13076042 13076053 -59077829 - L1MB8 LINE L1 -689 5495 5486 2081 50 123 0 chr20 13076053 13076330 -59077552 - AluY SINE Alu 0 311 1 7137 238 46 29 chr20 13076330 13077764 -59076118 - L1MB8 LINE L1 -698 5486 4078 1799 133 101 17 chr20 13077764 13078110 -59075772 + THE1C LTR MaLR 1 375 0 7137 238 46 29 chr20 13078110 13079440 -59074442 - L1MB8 LINE L1 -2106 4078 2669 402 198 58 0 chr20 13079455 13079541 -59074341 + MER5A DNA MER1_type 99 189 0 222 385 10 0 chr20 13080206 13080302 -59073580 + L3 LINE CR1 1016 1112 -465 657 139 31 7 chr20 13080584 13080782 -59073100 + LTR16A1 LTR ERVL 216 457 0 1653 144 12 0 chr20 13080942 13081185 -59072697 - AluSx SINE Alu -17 295 50 216 329 29 50 chr20 13081701 13081841 -59072041 + L3 LINE CR1 1204 1340 -237 289 326 141 28 chr20 13081876 13082228 -59071654 - L2 LINE L2 -185 3087 2702 1106 204 63 42 chr20 13082635 13083018 -59070864 - MER3 DNA MER1_type 0 2624 2234 408 198 45 9 chr20 13083020 13083131 -59070751 - MER3 DNA MER1_type -41 168 54 386 260 178 20 chr20 13083152 13083298 -59070584 + MER5A DNA MER1_type 9 177 -12 23 54 0 0 chr20 13084113 13084150 -59069732 + AT_rich Low_complexity Low_complexity 1 37 0 1423 169 4 66 chr20 13085134 13085407 -59068475 - AluJo SINE Alu -56 256 1 354 175 26 0 chr20 13085528 13085642 -59068240 + (CA)n Simple_repeat Simple_repeat 1 117 0 264 77 0 0 chr20 13086823 13086862 -59067020 + (GA)n Simple_repeat Simple_repeat 1 39 0 1558 242 41 32 chr20 13086888 13087380 -59066502 - LTR40a LTR ERVL -23 496 1 22 70 0 0 chr20 13087553 13087596 -59066286 + AT_rich Low_complexity Low_complexity 1 43 0 273 57 0 0 chr20 13087610 13087645 -59066237 + (TATG)n Simple_repeat Simple_repeat 2 36 0 25 0 0 0 chr20 13087787 13087812 -59066070 + AT_rich Low_complexity Low_complexity 1 25 0 370 277 59 0 chr20 13087994 13088113 -59065769 - MER117 DNA MER1_type -57 140 15 576 289 93 0 chr20 13088260 13088464 -59065418 - MIR SINE MIR -28 234 12 345 268 0 0 chr20 13088672 13088743 -59065139 + MER81 DNA DNA 1 71 -43 205 314 66 41 chr20 13088993 13089008 -59064874 + MER5A DNA MER1_type 3 20 -169 596 250 60 12 chr20 13089008 13089176 -59064706 - MER5A DNA MER1_type -2 187 12 505 280 90 65 chr20 13090085 13090550 -59063332 + L1MC5 LINE L1 7246 7722 -239 27 29 0 0 chr20 13090568 13090602 -59063280 + AT_rich Low_complexity Low_complexity 1 34 0 4504 157 61 40 chr20 13092856 13093656 -59060226 - L1MA9 LINE L1 0 6312 5479 1891 143 0 0 chr20 13093656 13093922 -59059960 - AluSx SINE Alu -46 266 1 4504 157 61 40 chr20 13093922 13094302 -59059580 - L1MA9 LINE L1 -833 5479 5108 31 68 0 0 chr20 13095660 13095719 -59058163 + AT_rich Low_complexity Low_complexity 1 59 0 898 228 64 14 chr20 13096100 13096319 -59057563 + MIR SINE MIR 5 234 -28 1962 127 32 0 chr20 13096553 13096836 -59057046 - AluSc SINE Alu -17 292 1 266 315 43 0 chr20 13097060 13097152 -59056730 - L2 LINE L2 -247 3066 2971 922 147 66 30 chr20 13097234 13097431 -59056451 - L1MB5 LINE L1 -8 6166 5963 644 214 0 0 chr20 13097434 13097588 -59056294 + L1MB8 LINE L1 5721 5874 -304 354 269 55 63 chr20 13097590 13097861 -59056021 + MLT1G LTR MaLR 98 366 -224 1999 267 125 32 chr20 13098048 13099095 -59054787 - L2 LINE L2 -135 3178 2042 217 277 109 10 chr20 13099384 13099485 -59054397 - L2 LINE L2 -528 2786 2676 1122 50 0 0 chr20 13099537 13099678 -59054204 + (TAAAA)n Simple_repeat Simple_repeat 2 142 0 797 202 11 16 chr20 13100802 13101344 -59052538 + GA-rich Low_complexity Low_complexity 1 539 0 2158 120 0 0 chr20 13101349 13101648 -59052234 - AluSx SINE Alu -13 299 1 238 296 0 34 chr20 13101884 13101972 -59051910 + MER5B DNA MER1_type 25 109 -69 245 283 0 76 chr20 13103757 13103849 -59050033 + MIR SINE MIR 114 198 -64 277 307 175 18 chr20 13105623 13105789 -59048093 + MIR SINE MIR 1 192 -70 665 262 58 52 chr20 13105821 13106184 -59047698 - LTR33 LTR ERVL -18 503 139 793 233 33 14 chr20 13106418 13106628 -59047254 + LTR16C LTR ERVL 278 491 0 216 319 28 0 chr20 13107362 13107434 -59046448 + L2 LINE L2 3236 3309 -4 203 218 18 18 chr20 13107570 13107625 -59046257 + (CATATA)n Simple_repeat Simple_repeat 6 60 0 1408 125 65 0 chr20 13108266 13108482 -59045400 + MER30 DNA MER1_type 1 230 0 864 261 103 58 chr20 13108740 13109185 -59044697 - MLT1H LTR MaLR -75 474 10 189 220 0 60 chr20 13109233 13109283 -59044599 - L3 LINE CR1 -32 1545 1499 240 35 0 0 chr20 13109293 13109322 -59044560 + (CA)n Simple_repeat Simple_repeat 2 30 0 234 0 0 0 chr20 13110464 13110490 -59043392 + (CA)n Simple_repeat Simple_repeat 2 27 0 214 246 0 33 chr20 13111408 13111469 -59042413 + CT-rich Low_complexity Low_complexity 1 59 0 673 307 197 13 chr20 13111904 13112453 -59041429 + L2 LINE L2 2639 3300 -13 819 278 195 20 chr20 13112778 13112926 -59040956 - L2 LINE L2 0 3313 3192 2152 102 0 3 chr20 13112926 13113238 -59040644 - AluSp SINE Alu 0 311 1 819 278 195 20 chr20 13113238 13113554 -59040328 - L2 LINE L2 -121 3192 2769 26 0 0 0 chr20 13113785 13113811 -59040071 + AT_rich Low_complexity Low_complexity 1 26 0 1804 174 96 53 chr20 13113847 13114370 -59039512 - L1MB8 LINE L1 -5 6173 5629 398 364 12 12 chr20 13115926 13116088 -59037794 - MIR3 SINE MIR -11 197 36 1542 231 10 8 chr20 13116487 13116876 -59037006 + MER63 DNA MER1_type 672 1061 -1 331 345 131 1 chr20 13117202 13117381 -59036501 - MIR SINE MIR -38 224 25 1895 139 3 16 chr20 13117406 13117709 -59036173 + AluSx SINE Alu 1 299 -13 669 268 35 10 chr20 13118086 13118341 -59035541 - MLT1H LTR MaLR -233 316 13 5781 197 12 4 chr20 13118848 13120203 -59033679 - L1 LINE L1 -901 5245 3881 776 48 19 0 chr20 13120209 13120313 -59033569 + L1P5 LINE L1 5686 5791 -360 301 196 0 0 chr20 13120328 13120384 -59033498 - L1MC4 LINE L1 -1339 6703 6648 2720 68 11 3 chr20 13120385 13120751 -59033131 + L1PB1 LINE L1 5782 6150 -1 23 68 0 0 chr20 13120751 13120795 -59033087 + AT_rich Low_complexity Low_complexity 1 44 0 384 311 172 27 chr20 13120795 13121161 -59032721 + LTR33 LTR ERVL 101 519 -2 520 301 86 0 chr20 13123485 13123648 -59030234 - MIR SINE MIR 0 262 86 509 265 68 0 chr20 13124653 13124815 -59029067 - MLT1J LTR MaLR -322 189 17 212 306 228 11 chr20 13125805 13125985 -59027897 - MIR SINE MIR -39 223 5 300 244 101 50 chr20 13127061 13127180 -59026702 + MIR3 SINE MIR 72 196 -12 22 0 0 0 chr20 13131779 13131801 -59022081 + AT_rich Low_complexity Low_complexity 1 22 0 223 401 167 0 chr20 13132933 13133065 -59020817 - L2 LINE L2 0 3272 3119 2444 70 0 10 chr20 13133349 13133651 -59020231 + AluY SINE Alu 1 299 -12 731 349 111 18 chr20 13133834 13134600 -59019282 - L2 LINE L2 -639 2675 1839 1749 169 6 31 chr20 13135340 13135660 -59018222 - AluSx SINE Alu 0 312 1 742 315 98 19 chr20 13135904 13136282 -59017600 - L2 LINE L2 0 3313 2906 566 276 24 93 chr20 13137016 13137349 -59016533 + MER102b DNA MER1_type 15 324 -17 1941 144 16 48 chr20 13137712 13138088 -59015794 - THE1B LTR MaLR 0 364 1 306 309 64 0 chr20 13138148 13138258 -59015624 + L2 LINE L2 3145 3261 -11 21 0 0 0 chr20 13139449 13139470 -59014412 + AT_rich Low_complexity Low_complexity 1 21 0 1966 152 13 7 chr20 13139546 13139855 -59014027 - AluSx SINE Alu -1 311 1 1969 149 55 9 chr20 13140110 13140438 -59013444 + MER61A LTR ERV1 1 343 0 1347 251 86 35 chr20 13140533 13141055 -59012827 + MLT1H LTR MaLR 1 549 0 255 239 0 45 chr20 13142437 13142504 -59011378 + L2 LINE L2 3246 3309 -4 23 33 0 0 chr20 13143388 13143418 -59010464 + AT_rich Low_complexity Low_complexity 1 30 0 22 56 0 0 chr20 13146259 13146295 -59007587 + AT_rich Low_complexity Low_complexity 1 36 0 328 242 0 42 chr20 13146743 13146838 -59007044 - MER81 DNA DNA 0 114 24 1018 241 24 59 chr20 13146871 13147348 -59006534 - MLT1H1 LTR MaLR 0 555 10 266 264 34 37 chr20 13147414 13147526 -59006356 - MIR SINE MIR -63 145 38 1536 85 0 19 chr20 13147709 13147921 -59005961 - AluY SINE Alu -11 300 93 1041 244 44 87 chr20 13148118 13148577 -59005305 - MLT1H LTR MaLR -93 456 18 348 285 95 65 chr20 13149226 13149489 -59004393 + MLT1H LTR MaLR 81 351 -198 216 259 0 0 chr20 13150125 13150183 -59003699 + GA-rich Low_complexity Low_complexity 1 58 0 282 270 61 52 chr20 13150227 13150342 -59003540 + MIR SINE MIR 36 151 -57 713 234 112 24 chr20 13150699 13150904 -59002978 + MIR SINE MIR 40 262 0 516 273 55 16 chr20 13153646 13153829 -59000053 - MIR SINE MIR -3 259 70 21 0 0 0 chr20 13154371 13154392 -58999490 + AT_rich Low_complexity Low_complexity 1 21 0 265 275 197 49 chr20 13154499 13154885 -58998997 - L3 LINE CR1 -121 1456 1014 848 275 17 13 chr20 13155729 13155962 -58997920 - MIR SINE MIR -6 256 23 843 230 5 10 chr20 13156356 13156556 -58997326 - MER113 DNA MER1_type? -66 455 257 245 234 11 43 chr20 13157016 13157110 -58996772 - MER113 DNA MER1_type? -320 201 111 728 197 45 30 chr20 13157195 13157459 -58996423 + LTR37B LTR ERV1 201 468 0 421 292 147 42 chr20 13160663 13161016 -58992866 - L2 LINE L2 -2 3311 2922 309 198 148 60 chr20 13161374 13161556 -58992326 - L1ME3A LINE L1 -9 6161 5964 307 184 53 0 chr20 13161715 13161791 -58992091 - L1ME3 LINE L1 -2 6160 6081 1928 158 10 3 chr20 13162758 13163062 -58990820 - AluJb SINE Alu -6 306 1 194 227 201 45 chr20 13163586 13163740 -58990142 + MER5A DNA MER1_type 10 187 -2 * 547 100 31 8 chr20 13163647 13163753 -58990129 - MER5A DNA MER1_type -77 112 4 336 358 21 21 chr20 13164405 13164595 -58989287 - MIR SINE MIR -41 221 32 285 29 0 0 chr20 13165335 13165369 -58988513 + (CA)n Simple_repeat Simple_repeat 1 34 0 709 233 23 6 chr20 13168038 13168210 -58985672 - MER5B DNA MER1_type 0 178 4 332 311 66 20 chr20 13168464 13168615 -58985267 + MIR3 SINE MIR 37 194 -14 800 280 0 0 chr20 13169384 13169573 -58984309 + MER58A DNA MER1_type 7 195 -29 400 276 93 45 chr20 13172911 13173179 -58980703 - L1MEd LINE L1 -2727 3402 3122 2163 149 95 0 chr20 13173212 13173602 -58980280 + MSTA LTR MaLR 2 428 0 405 328 78 0 chr20 13173802 13174034 -58979848 - L1MEd LINE L1 -3624 2505 2256 22 35 0 0 chr20 13174353 13174382 -58979500 + AT_rich Low_complexity Low_complexity 1 29 0 564 287 70 24 chr20 13174594 13175335 -58978547 - L1MEd LINE L1 -4522 1607 925 315 0 0 0 chr20 13175781 13175816 -58978066 + (TG)n Simple_repeat Simple_repeat 2 36 0 25 51 0 0 chr20 13176144 13176183 -58977699 + AT_rich Low_complexity Low_complexity 1 39 0 253 390 44 25 chr20 13176318 13176477 -58977405 + L3 LINE CR1 1394 1555 -22 623 307 46 28 chr20 13176807 13177025 -58976857 - MIR SINE MIR -38 224 3 186 150 0 0 chr20 13177181 13177221 -58976661 + (TG)n Simple_repeat Simple_repeat 1 40 0 414 370 17 0 chr20 13178290 13178463 -58975419 - MIR3 SINE MIR -3 205 30 217 236 6 45 chr20 13178706 13178863 -58975019 + (TA)n Simple_repeat Simple_repeat 2 152 0 1832 166 55 17 chr20 13179178 13179539 -58974343 + THE1C LTR MaLR 1 375 0 29 0 0 0 chr20 13181365 13181394 -58972488 + AT_rich Low_complexity Low_complexity 1 29 0 1379 227 89 53 chr20 13182053 13182397 -58971485 - MLT1F1 LTR MaLR -4 563 264 444 51 0 0 chr20 13182397 13182456 -58971426 + (CA)n Simple_repeat Simple_repeat 2 60 0 1379 227 89 53 chr20 13182456 13182730 -58971152 - MLT1F1 LTR MaLR -303 264 1 311 307 0 0 chr20 13183315 13183390 -58970492 - MIR3 SINE MIR -10 198 124 206 274 137 14 chr20 13183603 13183676 -58970206 + L2 LINE L2 3173 3254 -18 185 65 32 0 chr20 13185355 13185386 -58968496 + (CAATT)n Simple_repeat Simple_repeat 3 34 0 2188 62 7 11 chr20 13188342 13188614 -58965268 + AluY SINE Alu 1 271 -40 1652 276 72 4 chr20 13188954 13189414 -58964468 + MLT1H LTR MaLR 11 501 -48 568 262 84 31 chr20 13189414 13189700 -58964182 + L1MC4 LINE L1 7452 7752 -290 379 256 22 0 chr20 13189700 13189790 -58964092 - Tigger5 DNA MER2_type 0 2323 2232 344 200 14 14 chr20 13189831 13189901 -58963981 - Tigger5 DNA MER2_type 0 2323 2254 291 226 0 0 chr20 13189875 13189928 -58963954 - Tigger5 DNA MER2_type -2270 53 1 * 836 98 98 35 chr20 13189981 13190152 -58963730 + Tigger7 DNA MER2_type 2230 2411 -80 1615 146 4 0 chr20 13190152 13190412 -58963470 - Tigger5 DNA MER2_type -1 2322 2062 322 175 0 32 chr20 13190410 13190473 -58963409 - Tigger5 DNA MER2_type -2261 62 2 * 467 195 46 0 chr20 13190473 13190553 -58963329 + Tigger7 DNA MER2_type 2504 2587 0 397 248 29 15 chr20 13190553 13190690 -58963192 + L1MC4 LINE L1 7753 7891 -151 323 287 78 0 chr20 13190760 13190889 -58962993 + L1MC4 LINE L1 7904 8042 0 1995 162 20 26 chr20 13192448 13192800 -58961082 + THE1B LTR MaLR 15 364 0 11131 100 15 6 chr20 13192800 13194367 -58959515 + THE1B-int LTR MaLR 1 1580 0 2108 133 22 30 chr20 13194367 13194729 -58959153 + THE1B LTR MaLR 1 359 -5 253 263 20 61 chr20 13194889 13194988 -58958894 - MIR SINE MIR -162 100 6 282 116 0 0 chr20 13195452 13195495 -58958387 + (TG)n Simple_repeat Simple_repeat 2 44 0 2204 113 3 0 chr20 13195516 13195816 -58958066 - AluSp SINE Alu -11 302 2 1692 202 108 31 chr20 13195816 13196252 -58957630 - MLT2B1 LTR ERVL -47 473 1 520 279 83 57 chr20 13196921 13197186 -58956696 + MLT1H LTR MaLR 38 309 -240 30 0 0 0 chr20 13197445 13197475 -58956407 + AT_rich Low_complexity Low_complexity 1 30 0 377 230 10 0 chr20 13197527 13197627 -58956255 + (TA)n Simple_repeat Simple_repeat 2 102 0 376 311 23 38 chr20 13198511 13198643 -58955239 + MIR SINE MIR 16 145 -63 22 70 0 0 chr20 13200661 13200704 -58953178 + AT_rich Low_complexity Low_complexity 1 43 0 33 25 0 0 chr20 13201077 13201117 -58952765 + AT_rich Low_complexity Low_complexity 1 40 0 863 156 18 0 chr20 13201135 13201302 -58952580 - L1MA8 LINE L1 -4 6287 6118 566 114 0 0 chr20 13201314 13201402 -58952480 + L1MA8 LINE L1 6047 6134 -157 334 302 21 10 chr20 13201411 13201507 -58952375 + MIR SINE MIR 90 186 -76 302 338 81 26 chr20 13201664 13201898 -58951984 + MIR SINE MIR 1 247 -15 280 352 33 24 chr20 13202183 13202393 -58951489 - L3 LINE CR1 -119 1458 1247 535 271 7 14 chr20 13202709 13202853 -58951029 - MER45A DNA AcHobo 0 178 36 317 315 123 19 chr20 13203390 13203552 -58950330 + HAL1 LINE L1 1274 1452 -1055 525 313 107 26 chr20 13203863 13204096 -58949786 + MIR SINE MIR 8 259 -3 1533 291 72 50 chr20 13204195 13205519 -58948363 + L1ME3A LINE L1 3758 5111 -1035 225 260 39 8 chr20 13205551 13205678 -58948204 + (TA)n Simple_repeat Simple_repeat 1 131 0 379 310 0 0 chr20 13205735 13205848 -58948034 + L1ME3A LINE L1 5717 5829 -341 626 211 72 0 chr20 13205857 13206037 -58947845 + L1ME3A LINE L1 5796 5988 -182 258 255 69 20 chr20 13206077 13206179 -58947703 + L1ME3A LINE L1 6060 6166 -4 3311 123 16 0 chr20 13206192 13206678 -58947204 + L1PA7 LINE L1 8 501 -5960 13467 95 33 0 chr20 13206678 13209500 -58944382 + L1PA7 LINE L1 3668 6469 0 24 0 0 0 chr20 13209556 13209580 -58944302 + AT_rich Low_complexity Low_complexity 1 24 0 256 245 157 27 chr20 13209586 13209847 -58944035 + L1M4 LINE L1 4311 4605 -1541 234 241 0 0 chr20 13209920 13209974 -58943908 - MLT1F1 LTR MaLR -14 553 500 6436 249 59 44 chr20 13209975 13211602 -58942280 + L1MC3 LINE L1 8 1609 -4955 351 0 0 0 chr20 13211602 13211641 -58942241 + (CA)n Simple_repeat Simple_repeat 2 40 0 6436 249 59 44 chr20 13211641 13213327 -58940555 + L1MC3 LINE L1 1609 3268 -3296 2482 111 56 50 chr20 13213327 13213770 -58940112 + L1PA16 LINE L1 5717 6162 -4 6436 249 59 44 chr20 13213770 13215535 -58938347 + L1MC3 LINE L1 3268 5178 -1386 6047 213 39 18 chr20 13215532 13215549 -58938333 + L1MC3 LINE L1 5556 5571 -993 * 207 0 0 0 chr20 13215549 13215572 -58938310 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 6047 213 39 18 chr20 13215572 13217094 -58936788 + L1MC3 LINE L1 5571 5821 -743 3812 181 44 55 chr20 13217106 13217504 -58936378 + L1MC3 LINE L1 7250 7651 -552 2496 190 45 61 chr20 13217504 13218126 -58935756 - LTR9 LTR ERV1 0 612 1 3812 181 44 55 chr20 13218126 13218202 -58935680 + L1MC3 LINE L1 7651 7726 -477 2332 154 22 74 chr20 13218202 13218552 -58935330 - LTR54 LTR ERV1 0 510 196 2209 85 3 19 chr20 13218552 13218859 -58935023 + AluY SINE Alu 1 302 -9 2332 154 22 74 chr20 13218859 13219046 -58934836 - LTR54 LTR ERV1 -314 196 1 3812 181 44 55 chr20 13219046 13219519 -58934363 + L1MC3 LINE L1 7726 8188 -15 418 125 117 102 chr20 13219675 13219803 -58934079 + L1MC3 LINE L1 7656 7785 0 225 278 139 57 chr20 13219915 13220109 -58933773 - MLT1F1 LTR MaLR -226 323 114 339 343 6 6 chr20 13220221 13220393 -58933489 + L1M4 LINE L1 4666 4837 -1309 286 282 0 32 chr20 13220454 13220578 -58933304 + L1M4 LINE L1 4996 5115 -1031 28 29 0 0 chr20 13221336 13221371 -58932511 + AT_rich Low_complexity Low_complexity 1 35 0 432 266 58 7 chr20 13222510 13222664 -58931218 + MLT1J2 LTR MaLR 1 162 -288 1821 231 135 19 chr20 13222676 13223188 -58930694 - MLT1E LTR MaLR -8 585 15 291 71 0 0 chr20 13223406 13223448 -58930434 + (GA)n Simple_repeat Simple_repeat 2 43 0 22 80 0 0 chr20 13223923 13223973 -58929909 + AT_rich Low_complexity Low_complexity 1 50 0 2335 109 0 0 chr20 13224024 13224336 -58929546 - AluSx SINE Alu 0 312 1 669 229 21 36 chr20 13224389 13224581 -58929301 - MER5A DNA MER1_type 0 189 1 1015 227 59 12 chr20 13224603 13225065 -58928817 + MER34 LTR ERV1 28 542 0 201 170 19 57 chr20 13225303 13225356 -58928526 + L2 LINE L2 3263 3313 0 1045 221 74 140 chr20 13225446 13225917 -58927965 + MLT1H LTR MaLR 1 440 -109 4647 192 98 79 chr20 13226004 13226589 -58927293 - L1MC3 LINE L1 0 7785 7213 289 235 12 25 chr20 13226589 13226670 -58927212 - MLT1F1 LTR MaLR -442 125 46 4647 192 98 79 chr20 13226670 13227505 -58926377 - L1MC3 LINE L1 -572 7213 6256 1654 182 117 17 chr20 13227536 13227894 -58925988 - MSTD LTR MaLR -2 394 1 1041 230 58 54 chr20 13228223 13228680 -58925202 - MER39 LTR ERV1 -36 671 1 24 53 0 0 chr20 13229331 13229369 -58924513 + AT_rich Low_complexity Low_complexity 1 38 0 644 311 84 63 chr20 13229502 13229988 -58923894 + L1MDa LINE L1 1307 1792 -4748 278 286 62 0 chr20 13230018 13230130 -58923752 + L1MDa LINE L1 1861 1979 -4561 340 295 16 16 chr20 13230467 13230596 -58923286 - MLT1E LTR MaLR 0 593 465 381 278 36 101 chr20 13230638 13230886 -58922996 + L1MDa LINE L1 2610 2841 -3699 302 348 44 0 chr20 13230897 13231167 -58922715 + L1MDa LINE L1 2943 3224 -3316 533 234 23 100 chr20 13231215 13231514 -58922368 + Charlie4a DNA MER1_type 61 336 -172 36 40 0 0 chr20 13231534 13231584 -58922298 + AT_rich Low_complexity Low_complexity 1 50 0 380 177 28 50 chr20 13231597 13231778 -58922104 + (TATAA)n Simple_repeat Simple_repeat 3 179 0 27 73 0 0 chr20 13231828 13231883 -58921999 + AT_rich Low_complexity Low_complexity 1 55 0 228 35 0 0 chr20 13231893 13231922 -58921960 + (TA)n Simple_repeat Simple_repeat 1 29 0 324 0 0 0 chr20 13231924 13231960 -58921922 + (TG)n Simple_repeat Simple_repeat 1 36 0 1580 175 68 15 chr20 13231960 13232106 -58921776 - AluSg SINE Alu -33 277 140 2420 74 3 6 chr20 13232106 13232417 -58921465 - AluY SINE Alu 0 311 2 1580 175 68 15 chr20 13232417 13232533 -58921349 - AluSg SINE Alu -170 140 1 2331 189 13 17 chr20 13232585 13233056 -58920826 - MLT2B1 LTR ERVL -48 472 4 529 252 0 0 chr20 13233156 13233263 -58920619 + MER2 DNA MER2_type 2 108 -237 487 211 128 9 chr20 13234428 13234537 -58919345 - FLAM_A SINE Alu -11 122 1 216 345 134 14 chr20 13234912 13235054 -58918828 - MER5A DNA MER1_type -7 182 24 268 283 242 0 chr20 13235083 13235203 -58918679 - MER5A DNA MER1_type 0 189 41 427 193 47 151 chr20 13235596 13235656 -58918226 - MER5B DNA MER1_type -2 176 111 1887 115 52 0 chr20 13235656 13235961 -58917921 + AluSx SINE Alu 1 319 0 427 193 47 151 chr20 13235961 13236091 -58917791 - MER5B DNA MER1_type -67 111 5 588 349 79 49 chr20 13236475 13236966 -58916916 + L2 LINE L2 2256 2731 -541 1422 188 26 43 chr20 13236966 13237270 -58916612 + AluJo SINE Alu 1 299 -13 588 349 79 49 chr20 13237270 13237751 -58916131 + L2 LINE L2 2731 3244 -28 21 0 0 0 chr20 13237751 13237772 -58916110 + AT_rich Low_complexity Low_complexity 1 21 0 214 288 38 0 chr20 13238079 13238159 -58915723 - MIR3 SINE MIR -50 158 76 1477 245 87 37 chr20 13238492 13239080 -58914802 + MLT1E3 LTR MaLR 1 617 -7 654 254 45 23 chr20 13239242 13239419 -58914463 + MER5A DNA MER1_type 9 189 0 800 183 70 93 chr20 13240580 13240925 -58912957 + LTR37A LTR ERV1 85 421 -5 248 258 0 93 chr20 13241002 13241099 -58912783 + MER58B DNA MER1_type 20 107 -234 31 68 0 0 chr20 13241102 13241161 -58912721 + AT_rich Low_complexity Low_complexity 1 59 0 727 191 66 38 chr20 13241265 13241404 -58912478 - MER6B DNA MER2_type -674 191 44 2366 119 14 8 chr20 13241404 13241766 -58912116 + THE1B LTR MaLR 1 364 0 727 191 66 38 chr20 13241766 13241809 -58912073 - MER6B DNA MER2_type -821 44 4 482 262 8 0 chr20 13241819 13241941 -58911941 + MER58B DNA MER1_type 209 331 -10 2034 158 0 0 chr20 13241999 13242291 -58911591 + AluSx SINE Alu 1 292 -20 394 301 19 0 chr20 13242324 13242427 -58911455 - MER5A DNA MER1_type -83 106 2 2082 188 78 6 chr20 13242457 13242967 -58910915 + L1MC3 LINE L1 7226 7772 -13 561 301 32 40 chr20 13243003 13243239 -58910643 + L1 LINE L1 3547 3780 -2366 2067 139 35 0 chr20 13243239 13243527 -58910355 + AluSx SINE Alu 1 298 -14 561 301 32 40 chr20 13243527 13243695 -58910187 + L1 LINE L1 3780 3948 -2198 306 342 74 54 chr20 13243842 13244140 -58909742 + L1 LINE L1 4081 4384 -1762 264 198 43 35 chr20 13244141 13244257 -58909625 + L1ME2 LINE L1 6038 6154 -10 389 245 34 7 chr20 13244971 13245118 -58908764 - L1ME1 LINE L1 -9 6157 6007 678 303 52 23 chr20 13245782 13246089 -58907793 + MLT1G LTR MaLR 15 330 -260 16184 160 8 21 chr20 13246089 13250534 -58903348 - L1P3 LINE L1 -2012 4449 1 690 189 15 0 chr20 13250626 13250758 -58903124 + MER94 DNA DNA 1 134 0 2210 203 18 25 chr20 13251168 13251657 -58902225 + MER66B LTR ERV1 1 486 0 487 259 48 48 chr20 13251712 13251901 -58901981 - MER5A DNA MER1_type 0 189 1 701 253 6 6 chr20 13251906 13252084 -58901798 - MER5B DNA MER1_type 0 178 1 249 333 13 13 chr20 13252124 13252202 -58901680 + L2 LINE L2 3134 3211 -61 1303 239 72 48 chr20 13252364 13252861 -58901021 - MLT1H LTR MaLR 0 549 41 479 309 149 23 chr20 13254793 13255136 -58898746 - L2 LINE L2 -3 3310 2925 232 177 32 16 chr20 13255173 13255235 -58898647 + (TA)n Simple_repeat Simple_repeat 2 64 0 347 284 35 64 chr20 13255288 13255429 -58898453 + L2 LINE L2 3144 3280 -33 1500 287 58 6 chr20 13255775 13256297 -58897585 - MLT1H LTR MaLR 0 549 1 1013 193 5 24 chr20 13256365 13256577 -58897305 - MER58A DNA MER1_type -15 209 2 890 191 12 0 chr20 13257057 13257230 -58896652 + MER5B DNA MER1_type 1 175 -3 471 263 144 12 chr20 13258491 13258651 -58895231 + MER5A DNA MER1_type 9 189 0 341 344 23 0 chr20 13259661 13259792 -58894090 + MIR SINE MIR 108 241 -21 579 194 0 15 chr20 13260036 13260297 -58893585 + (TG)n Simple_repeat Simple_repeat 1 256 0 477 239 0 11 chr20 13260329 13260796 -58893086 + (TG)n Simple_repeat Simple_repeat 1 461 0 268 291 138 22 chr20 13261574 13261747 -58892135 - MIR SINE MIR -40 168 19 1515 286 67 6 chr20 13261824 13262478 -58891404 - L1ME3A LINE L1 -74 6096 5416 1146 277 16 9 chr20 13262705 13263026 -58890856 + MLT1H LTR MaLR 12 334 -215 2190 101 54 3 chr20 13263289 13263585 -58890297 + AluSx SINE Alu 1 311 -1 479 237 177 8 chr20 13264009 13264152 -58889730 - MER5A DNA MER1_type -31 158 9 1365 185 67 12 chr20 13264687 13264812 -58889070 + AluJb SINE Alu 1 118 -194 396 0 0 0 chr20 13264812 13264856 -58889026 + (TAAA)n Simple_repeat Simple_repeat 4 47 0 1365 185 67 12 chr20 13264856 13264984 -58888898 + AluJb SINE Alu 118 268 -44 260 224 0 0 chr20 13265217 13265266 -58888616 + MER5A DNA MER1_type 26 74 -115 24275 148 8 13 chr20 13265268 13266643 -58887239 + L1PA8A LINE L1 824 2204 -4242 1788 86 4 25 chr20 13266643 13266886 -58886996 - AluY SINE Alu -9 302 65 24275 148 8 13 chr20 13266886 13267358 -58886524 + L1PA8A LINE L1 2204 2677 -3769 267 31 0 0 chr20 13267358 13267390 -58886492 + (CAA)n Simple_repeat Simple_repeat 2 33 0 24275 148 8 13 chr20 13267390 13269137 -58884745 + L1PA8A LINE L1 2677 4431 -2015 2316 99 20 0 chr20 13269137 13269441 -58884441 + AluSg SINE Alu 1 310 0 24275 148 8 13 chr20 13269441 13271492 -58882390 + L1PA8A LINE L1 4431 6443 -3 631 218 16 0 chr20 13271538 13271662 -58882220 + MER5A DNA MER1_type 61 186 -3 250 322 164 34 chr20 13271670 13271816 -58882066 + MER5A DNA MER1_type 19 183 -6 690 343 44 9 chr20 13272641 13272962 -58880920 - LTR16B LTR ERVL -10 454 123 256 218 51 64 chr20 13273671 13273749 -58880133 + MIR SINE MIR 80 156 -106 21 0 0 0 chr20 13273798 13273819 -58880063 + AT_rich Low_complexity Low_complexity 1 21 0 196 370 71 31 chr20 13274208 13274335 -58879547 + MIR3 SINE MIR 2 133 -75 316 269 88 53 chr20 13274856 13275027 -58878855 + MIR3 SINE MIR 26 202 -6 701 240 113 89 chr20 13275148 13275643 -58878239 - MLT1H LTR MaLR -22 527 21 3414 190 118 12 chr20 13275969 13276716 -58877166 - LTR1B LTR ERV1 0 826 1 359 274 171 27 chr20 13277200 13277346 -58876536 - MER5A DNA MER1_type 0 189 23 351 0 0 0 chr20 13278323 13278362 -58875520 + (TG)n Simple_repeat Simple_repeat 2 40 0 21 0 0 0 chr20 13278709 13278730 -58875152 + AT_rich Low_complexity Low_complexity 1 21 0 210 269 86 21 chr20 13279431 13279524 -58874358 - L2 LINE L2 0 3313 3215 421 291 116 30 chr20 13279548 13279816 -58874066 + L2 LINE L2 3023 3313 0 2671 149 14 0 chr20 13280360 13280782 -58873100 - MSTA LTR MaLR 0 428 1 242 316 117 12 chr20 13281065 13281236 -58872646 + L1MC/D LINE L1 5488 5676 -2132 267 259 0 0 chr20 13281246 13281331 -58872551 + GA-rich Low_complexity Low_complexity 1 85 0 466 227 76 0 chr20 13281541 13281673 -58872209 + LTR50 LTR ERVL 1 142 -653 805 228 107 0 chr20 13282107 13282304 -58871578 + MER20 DNA MER1_type 2 219 0 263 279 33 25 chr20 13282388 13282510 -58871372 + MIR SINE MIR 94 216 -46 247 187 107 6 chr20 13285198 13285281 -58868601 + MLT1J2 LTR MaLR 318 430 0 324 83 0 0 chr20 13286728 13286776 -58867106 + (CA)n Simple_repeat Simple_repeat 2 49 0 1043 292 25 23 chr20 13286815 13287204 -58866678 + LTR16C LTR ERVL 62 486 -5 387 0 0 0 chr20 13287204 13287247 -58866635 + (CA)n Simple_repeat Simple_repeat 2 44 0 438 363 33 20 chr20 13287596 13287841 -58866041 + L3 LINE CR1 404 651 -926 342 362 58 23 chr20 13287942 13288287 -58865595 + L3 LINE CR1 645 1001 -576 500 283 27 80 chr20 13288914 13289159 -58864723 + MIR SINE MIR 6 235 -27 21 36 0 0 chr20 13289182 13289210 -58864672 + AT_rich Low_complexity Low_complexity 1 28 0 21 95 0 0 chr20 13289524 13289587 -58864295 + AT_rich Low_complexity Low_complexity 1 63 0 186 355 82 9 chr20 13289860 13289970 -58863912 - MIR SINE MIR -68 140 23 206 271 186 0 chr20 13290037 13290107 -58863775 - MER5C DNA MER1_type 0 324 242 257 203 95 0 chr20 13290152 13290226 -58863656 - MER5C DNA MER1_type -200 124 44 455 283 12 32 chr20 13290392 13290590 -58863292 + MLT1F1 LTR MaLR 1 197 -370 659 147 0 53 chr20 13290600 13290790 -58863092 + (TC)n Simple_repeat Simple_repeat 1 180 0 202 246 35 0 chr20 13290790 13290847 -58863035 + CT-rich Low_complexity Low_complexity 1 59 0 1546 201 67 24 chr20 13290847 13291220 -58862662 + MLT1F1 LTR MaLR 177 565 -2 688 336 52 17 chr20 13291377 13291766 -58862116 + LTR16A LTR ERVL 43 457 0 221 339 105 8 chr20 13292349 13292473 -58861409 - MIR SINE MIR -49 213 78 344 264 36 0 chr20 13292484 13292594 -58861288 + LTR37B LTR ERV1 7 120 -348 1071 230 24 0 chr20 13292600 13292813 -58861069 + MER58A DNA MER1_type 7 224 0 684 227 42 32 chr20 13292882 13293098 -58860784 + LTR37B LTR ERV1 211 428 -40 1639 189 0 25 chr20 13293104 13293421 -58860461 - AluJb SINE Alu -3 309 1 435 318 59 6 chr20 13295073 13295243 -58858639 - MIR SINE MIR -51 211 33 192 352 0 0 chr20 13295387 13295441 -58858441 - L3 LINE CR1 -5 1572 1519 1086 179 48 0 chr20 13296167 13296374 -58857508 + MER20 DNA MER1_type 2 218 -1 377 350 40 7 chr20 13297073 13297206 -58856676 + MIR3 SINE MIR 20 157 -51 1755 154 89 3 chr20 13297302 13297639 -58856243 - MER47A DNA MER2_type 0 366 1 588 214 8 16 chr20 13298063 13298189 -58855693 + MLT1F LTR MaLR 1 125 -417 1505 223 49 39 chr20 13298281 13298388 -58855494 + MLT1F LTR MaLR 131 235 -307 3096 158 1 72 chr20 13298388 13299058 -58854824 + L1PA15 LINE L1 5543 6165 0 1505 223 49 39 chr20 13299058 13299358 -58854524 + MLT1F LTR MaLR 235 542 0 234 0 0 0 chr20 13299438 13299464 -58854418 + (CAAA)n Simple_repeat Simple_repeat 1 26 0 677 283 42 33 chr20 13300018 13300258 -58853624 - MLT1J1 LTR MaLR -125 321 80 216 0 0 0 chr20 13300324 13300348 -58853534 + (T)n Simple_repeat Simple_repeat 1 24 0 1056 343 62 18 chr20 13301497 13302218 -58851664 + L2 LINE L2 2312 3059 -254 1423 131 4 0 chr20 13302254 13302491 -58851391 - L1MA3 LINE L1 0 6305 6068 727 258 0 7 chr20 13302492 13302681 -58851201 + AluJb SINE Alu 137 312 0 14066 181 28 10 chr20 13302681 13306656 -58847226 - L1MA3 LINE L1 -228 7496 3441 475 174 76 7 chr20 13306655 13306799 -58847083 - L1 LINE L1 -2855 3291 3138 * 505 117 58 19 chr20 13306800 13306903 -58846979 + L1M1 LINE L1 2521 2627 -4938 * 19059 164 37 15 chr20 13306902 13310263 -58843619 - L1MA3 LINE L1 -4116 3449 15 719 152 18 0 chr20 13310386 13310498 -58843384 - LTR9 LTR ERV1 0 612 499 1650 99 0 0 chr20 13310517 13310730 -58843152 - AluSq SINE Alu -100 213 1 2113 162 89 18 chr20 13310736 13311130 -58842752 - LTR9 LTR ERV1 -190 422 1 1163 71 24 30 chr20 13311155 13311324 -58842558 + AluY SINE Alu 1 168 -143 281 232 0 0 chr20 13312033 13312089 -58841793 + L2 LINE L2 3253 3308 -5 555 326 99 51 chr20 13312241 13312633 -58841249 + MLT1K LTR MaLR 16 426 -162 266 327 246 0 chr20 13312809 13313020 -58840862 - L3 LINE CR1 -125 1452 1190 1591 216 65 86 chr20 13313165 13313687 -58840195 - MLT1H LTR MaLR -36 513 3 14377 223 36 29 chr20 13313959 13320676 -58833206 + L1PB4 LINE L1 10 6853 -5 183 80 0 0 chr20 13320914 13320939 -58832943 + (TTCA)n Simple_repeat Simple_repeat 2 26 0 463 223 11 0 chr20 13322099 13322193 -58831689 + MIR3 SINE MIR 104 198 -10 967 288 89 24 chr20 13322565 13322982 -58830900 + LTR16A1 LTR ERVL 1 444 -13 565 252 39 17 chr20 13323881 13324047 -58829835 + MIR SINE MIR 5 169 -66 438 245 93 22 chr20 13326877 13327016 -58826866 - MIR SINE MIR -65 197 49 180 345 35 0 chr20 13327122 13327180 -58826702 - MER5A DNA MER1_type -18 171 112 193 236 0 55 chr20 13327229 13327284 -58826598 - MER5B DNA MER1_type -126 52 1 1259 206 46 31 chr20 13327621 13327946 -58825936 + MLT1H LTR MaLR 40 369 -180 719 162 35 35 chr20 13327940 13328082 -58825800 - MLT1H LTR MaLR -407 142 1 * 225 0 0 0 chr20 13328432 13328457 -58825425 + (A)n Simple_repeat Simple_repeat 1 25 0 378 260 39 0 chr20 13329416 13329543 -58824339 - MER103 DNA DNA -11 155 24 26 30 0 0 chr20 13330202 13330235 -58823647 + AT_rich Low_complexity Low_complexity 1 33 0 23 86 0 0 chr20 13330322 13330380 -58823502 + AT_rich Low_complexity Low_complexity 1 58 0 412 344 106 22 chr20 13330477 13330750 -58823132 - L1ME3 LINE L1 -268 5894 5599 1004 257 126 17 chr20 13330903 13331315 -58822567 + LTR16A1 LTR ERVL 1 457 0 271 253 0 12 chr20 13331327 13331410 -58822472 + T-rich Low_complexity Low_complexity 2 83 0 325 152 0 25 chr20 13332736 13332815 -58821067 + (TA)n Simple_repeat Simple_repeat 2 78 0 1955 89 0 0 chr20 13332860 13333107 -58820775 + AluY SINE Alu 37 283 -28 474 339 61 6 chr20 13334155 13334335 -58819547 + MIR SINE MIR 20 209 -53 195 42 0 0 chr20 13334386 13334410 -58819472 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 265 156 16 16 chr20 13334498 13334562 -58819320 + (TA)n Simple_repeat Simple_repeat 2 65 0 315 193 72 12 chr20 13334562 13334645 -58819237 - L1MC4 LINE L1 -1340 6702 6615 434 378 80 0 chr20 13334722 13334947 -58818935 + MIR SINE MIR 20 262 0 485 305 23 8 chr20 13335651 13335843 -58818039 - MIR SINE MIR -28 234 40 205 306 58 50 chr20 13335909 13336030 -58817852 - MIR SINE MIR -112 150 29 973 303 72 24 chr20 13336251 13336720 -58817162 - MLT1H LTR MaLR 0 549 58 954 267 11 4 chr20 13337584 13337850 -58816032 + L1ME3A LINE L1 5476 5743 -427 681 223 76 5 chr20 13337844 13338041 -58815841 + L1ME3A LINE L1 5945 6155 -15 * 22 56 0 0 chr20 13338764 13338800 -58815082 + AT_rich Low_complexity Low_complexity 1 36 0 481 249 61 57 chr20 13338865 13339102 -58814780 + L1MB8 LINE L1 5677 5921 -257 1701 197 12 14 chr20 13339102 13339447 -58814435 + MLT1A1 LTR MaLR 1 344 -21 236 75 0 25 chr20 13339482 13339522 -58814360 + (TA)n Simple_repeat Simple_repeat 2 40 0 302 237 10 52 chr20 13339605 13339702 -58814180 + L1MC4 LINE L1 6611 6703 -1339 337 184 0 23 chr20 13339712 13339799 -58814083 + (TA)n Simple_repeat Simple_repeat 2 86 0 229 267 0 0 chr20 13339990 13340050 -58813832 + GA-rich Low_complexity Low_complexity 1 60 0 304 292 26 9 chr20 13341906 13342019 -58811863 + GA-rich Low_complexity Low_complexity 2 116 0 800 183 0 0 chr20 13342098 13342235 -58811647 + AluJb SINE Alu 171 307 -5 407 254 7 0 chr20 13342975 13343113 -58810769 + GA-rich Low_complexity Low_complexity 3 141 0 678 249 29 29 chr20 13346065 13346270 -58807612 + L2 LINE L2 3109 3313 0 306 182 0 0 chr20 13347206 13347272 -58806610 + (TA)n Simple_repeat Simple_repeat 2 67 0 23 0 0 0 chr20 13347434 13347457 -58806425 + AT_rich Low_complexity Low_complexity 1 23 0 322 160 13 13 chr20 13347814 13347889 -58805993 + CT-rich Low_complexity Low_complexity 1 75 0 456 175 56 7 chr20 13348240 13348383 -58805499 + L1MA2 LINE L1 3161 3310 -2836 739 203 0 0 chr20 13348385 13348543 -58805339 - L1PB2 LINE L1 -3774 2372 2215 11617 187 31 10 chr20 13348544 13348772 -58805110 + L1PB2 LINE L1 2386 2608 -3543 2488 54 0 0 chr20 13348772 13349069 -58804813 + AluY SINE Alu 1 297 -14 11617 187 31 10 chr20 13349069 13350823 -58803059 + L1PB2 LINE L1 2608 4324 -1827 231 36 0 0 chr20 13350823 13350851 -58803031 + (TC)n Simple_repeat Simple_repeat 2 29 0 369 0 0 0 chr20 13350853 13350894 -58802988 + (CA)n Simple_repeat Simple_repeat 2 42 0 11617 187 31 10 chr20 13350894 13351168 -58802714 + L1PB2 LINE L1 4324 4591 -1560 1882 134 58 30 chr20 13351168 13351533 -58802349 + THE1C LTR MaLR 1 375 0 11617 187 31 10 chr20 13351533 13352015 -58801867 + L1PB2 LINE L1 4591 5062 -1089 216 0 0 0 chr20 13352015 13352039 -58801843 + (TAA)n Simple_repeat Simple_repeat 2 25 0 11617 187 31 10 chr20 13352039 13352624 -58801258 + L1PB2 LINE L1 5062 5633 -518 360 0 0 0 chr20 13352624 13352664 -58801218 + (TA)n Simple_repeat Simple_repeat 1 40 0 291 28 0 0 chr20 13352663 13352699 -58801183 + (CA)n Simple_repeat Simple_repeat 2 37 0 * 11617 187 31 10 chr20 13352664 13353049 -58800833 + L1PB2 LINE L1 5633 6138 -13 6490 170 28 18 chr20 13353059 13355951 -58797931 + L1MA2 LINE L1 3287 6304 0 21 0 0 0 chr20 13355985 13356006 -58797876 + AT_rich Low_complexity Low_complexity 1 21 0 239 288 65 14 chr20 13356341 13356480 -58797402 - HAL1 LINE L1 -921 1586 1441 337 261 70 35 chr20 13356669 13356811 -58797071 + MER5A DNA MER1_type 43 189 0 25 0 0 0 chr20 13357546 13357571 -58796311 + AT_rich Low_complexity Low_complexity 1 25 0 10476 50 10 40 chr20 13357572 13358966 -58794916 - SVA Other Other -14 1372 20 511 168 0 9 chr20 13360140 13360247 -58793635 - MER53 DNA DNA -83 106 1 605 255 19 25 chr20 13361046 13361207 -58792675 + MER63 DNA MER1_type 4 789 -273 196 354 13 0 chr20 13362000 13362079 -58791803 - L3 LINE CR1 -106 1471 1392 2507 176 30 77 chr20 13362289 13362924 -58790958 - LTR9 LTR ERV1 0 612 8 288 130 0 0 chr20 13363844 13363890 -58789992 + (GGAAA)n Simple_repeat Simple_repeat 5 50 0 444 104 0 0 chr20 13364278 13364345 -58789537 + (TA)n Simple_repeat Simple_repeat 2 68 0 249 139 0 0 chr20 13366712 13366755 -58787127 + (CATA)n Simple_repeat Simple_repeat 4 46 0 604 206 30 85 chr20 13367515 13367714 -58786168 - MER5A DNA MER1_type -1 188 1 263 301 6 103 chr20 13368304 13368460 -58785422 - L2 LINE L2 -926 2388 2248 640 316 72 65 chr20 13368522 13368581 -58785301 - L2 LINE L2 -1 3312 3255 1831 222 48 76 chr20 13368581 13369225 -58784657 - MLT1E2 LTR MaLR 0 626 1 640 316 72 65 chr20 13369225 13369276 -58784606 - L2 LINE L2 -58 3255 3206 290 25 0 25 chr20 13369276 13369316 -58784566 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 1035 103 76 38 chr20 13369319 13369503 -58784379 - L1PA16 LINE L1 -13 6153 5963 640 316 72 65 chr20 13369503 13369861 -58784021 - L2 LINE L2 -108 3205 2836 494 214 0 0 chr20 13370729 13370827 -58783055 + MER58B DNA MER1_type 161 258 -83 2482 55 3 10 chr20 13370827 13371135 -58782747 + AluY SINE Alu 1 306 -5 867 133 26 26 chr20 13371135 13371286 -58782596 + AluSg/x SINE Alu 134 284 -28 262 224 60 0 chr20 13371289 13371356 -58782526 + MER58B DNA MER1_type 271 341 0 311 330 25 0 chr20 13371385 13371503 -58782379 - L2 LINE L2 -925 2389 2269 2124 108 7 7 chr20 13371988 13372284 -58781598 + AluSq SINE Alu 1 296 -17 438 361 120 37 chr20 13372311 13373120 -58780762 - L2 LINE L2 -1110 2204 1329 29 47 0 0 chr20 13373468 13373511 -58780371 + AT_rich Low_complexity Low_complexity 1 43 0 2364 100 0 3 chr20 13374039 13374349 -58779533 - AluSc SINE Alu 0 309 1 254 299 31 0 chr20 13374351 13374448 -58779434 + HAL1 LINE L1 813 912 -1595 9210 198 19 12 chr20 13374861 13378121 -58775761 + L1PA16 LINE L1 2869 6144 -22 1154 240 79 72 chr20 13378125 13378695 -58775187 + L1ME1 LINE L1 5584 6157 -9 197 353 166 36 chr20 13379011 13379614 -58774268 - L2 LINE L2 -1904 1410 730 2511 55 13 0 chr20 13381380 13381688 -58772194 + AluSx SINE Alu 1 312 0 185 290 16 32 chr20 13382791 13382853 -58771029 + L2 LINE L2 1350 1410 -1904 1628 199 23 35 chr20 13383156 13383803 -58770079 + L1M4 LINE L1 4944 5576 -598 1597 53 3 212 chr20 13386342 13386685 -58767197 - AluY SINE Alu 0 303 28 24 0 0 0 chr20 13386916 13386940 -58766942 + AT_rich Low_complexity Low_complexity 1 24 0 459 0 0 0 chr20 13387961 13388012 -58765870 + (CA)n Simple_repeat Simple_repeat 2 52 0 2190 105 0 0 chr20 13389429 13389743 -58764139 - AluSq SINE Alu 0 314 1 1358 121 0 19 chr20 13389753 13389959 -58763923 - AluSq SINE Alu -21 292 91 419 312 128 0 chr20 13390030 13390171 -58763711 - MIR SINE MIR -43 219 61 228 254 50 72 chr20 13390955 13391136 -58762746 - LTR16A LTR ERVL -120 330 154 413 335 90 32 chr20 13391661 13392037 -58761845 - LTR16B LTR ERVL -10 454 57 931 221 46 79 chr20 13392151 13392330 -58761552 - MLT1A1 LTR MaLR -8 374 191 2193 112 0 29 chr20 13392330 13392642 -58761240 - AluSx SINE Alu -7 305 3 931 221 46 79 chr20 13392642 13392862 -58761020 - MLT1A1 LTR MaLR -191 191 1 1673 185 20 7 chr20 13393025 13393322 -58760560 - AluJb SINE Alu -10 302 2 227 320 31 8 chr20 13393899 13394027 -58759855 - MER110 LTR ERV1 -36 455 325 345 248 93 50 chr20 13394486 13394647 -58759235 - HAL1b LINE L1 -435 913 746 508 263 81 19 chr20 13394717 13394877 -58759005 - MIR SINE MIR 0 262 93 307 343 85 44 chr20 13394976 13395140 -58758742 + L2 LINE L2 2912 3068 -245 2004 125 47 0 chr20 13395140 13395436 -58758446 - AluSx SINE Alu -2 310 1 307 343 85 44 chr20 13395436 13395635 -58758247 + L2 LINE L2 3068 3290 -23 723 245 70 17 chr20 13396725 13397112 -58756770 - LTR16A1 LTR ERVL 0 457 2 1321 214 152 17 chr20 13397666 13398086 -58755796 - MLT1D LTR MaLR -26 479 3 367 390 69 19 chr20 13398108 13398485 -58755397 - L2 LINE L2 -575 2739 2344 183 42 0 0 chr20 13399011 13399035 -58754847 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 241 341 15 0 chr20 13399527 13399659 -58754223 + LTR16A1 LTR ERVL 320 453 -4 2163 157 6 0 chr20 13400372 13400717 -58753165 - MER7A DNA MER2_type 0 346 2 785 194 8 0 chr20 13401007 13401131 -58752751 + MER5A DNA MER1_type 10 134 -55 242 318 16 0 chr20 13401256 13401319 -58752563 - MER5A DNA MER1_type -70 119 56 963 242 83 28 chr20 13401643 13401969 -58751913 - MER2 DNA MER2_type 0 344 1 2766 97 69 14 chr20 13402337 13402772 -58751110 - L1PA11 LINE L1 -1 6173 5715 2294 62 52 0 chr20 13402787 13403075 -58750807 - AluY SINE Alu -8 303 1 696 249 59 39 chr20 13403078 13403425 -58750457 + MLT1F LTR MaLR 38 368 -174 1258 156 25 0 chr20 13404124 13404362 -58749520 + L1M1 LINE L1 5297 5540 -760 * 4756 149 32 8 chr20 13404360 13405255 -58748627 + L1MA6 LINE L1 5384 6300 0 648 311 122 3 chr20 13405533 13405829 -58748053 - MLT1I LTR MaLR -76 333 3 1198 221 13 0 chr20 13407042 13407341 -58746541 - L1P LINE L1 -815 5331 5029 4702 121 29 4 chr20 13407343 13408112 -58745770 + L1PA16 LINE L1 5370 6157 -9 23 0 0 0 chr20 13408112 13408135 -58745747 + AT_rich Low_complexity Low_complexity 1 23 0 859 248 30 55 chr20 13409272 13409635 -58744247 + LTR16A1 LTR ERVL 16 369 -88 6125 148 25 4 chr20 13411145 13413281 -58740601 - L1MA3 LINE L1 0 6305 4123 391 310 51 11 chr20 13413397 13413671 -58740211 - L1ME LINE L1 -558 5612 5328 579 296 72 58 chr20 13413856 13414342 -58739540 - MLT1H LTR MaLR 0 549 57 265 262 82 20 chr20 13414396 13414618 -58739264 - L1ME LINE L1 -1006 5140 4904 491 236 136 27 chr20 13415241 13415461 -58738421 - LTR16B LTR ERVL 0 464 221 * 1897 205 96 22 chr20 13415460 13415919 -58737963 - MLT1D LTR MaLR -12 493 1 217 307 11 0 chr20 13416152 13416240 -58737642 + CT-rich Low_complexity Low_complexity 2 90 0 2158 126 0 3 chr20 13416545 13416847 -58737035 + AluSg1 SINE Alu 1 301 -8 3157 68 21 7 chr20 13417028 13417454 -58736428 + L1PA8 LINE L1 5736 6167 -5 198 0 0 0 chr20 13418591 13418613 -58735269 + (T)n Simple_repeat Simple_repeat 1 22 0 30 27 0 0 chr20 13418966 13419003 -58734879 + AT_rich Low_complexity Low_complexity 1 37 0 573 325 79 0 chr20 13419096 13419336 -58734546 - MIR SINE MIR 0 262 4 467 277 49 22 chr20 13419608 13419792 -58734090 - MER5A DNA MER1_type 0 189 1 260 296 56 9 chr20 13420117 13420225 -58733657 - L2 LINE L2 -8 3305 3193 285 275 38 12 chr20 13420754 13420834 -58733048 + MIR SINE MIR 60 141 -121 1049 259 39 94 chr20 13420917 13421481 -58732401 + MLT1H LTR MaLR 1 533 -16 258 81 0 0 chr20 13421904 13421941 -58731941 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 233 154 39 0 chr20 13422345 13422397 -58731485 - MADE1 DNA Mariner -24 56 3 2571 61 0 0 chr20 13422483 13422794 -58731088 + AluY SINE Alu 1 311 0 308 171 60 19 chr20 13422930 13423038 -58730844 - MLT1J2 LTR MaLR -10 533 431 206 213 0 0 chr20 13424532 13424579 -58729303 + (GGGTG)n Simple_repeat Simple_repeat 5 51 0 198 200 0 20 chr20 13425391 13425441 -58728441 - L2 LINE L2 0 3313 3265 300 245 138 11 chr20 13425659 13425753 -58728129 - L2 LINE L2 -15 3298 3193 696 248 67 21 chr20 13426085 13426323 -58727559 - MLT1J2 LTR MaLR -201 249 1 710 182 122 23 chr20 13426487 13426701 -58727181 - L1MD3 LINE L1 -1 7994 7760 203 152 0 0 chr20 13426719 13426752 -58727130 + (CA)n Simple_repeat Simple_repeat 2 34 0 429 308 115 0 chr20 13426951 13427133 -58726749 - MIR SINE MIR -4 258 56 925 219 11 16 chr20 13427707 13427890 -58725992 + MER5A DNA MER1_type 1 182 -7 223 297 153 17 chr20 13427935 13428053 -58725829 + MIR SINE MIR 7 140 -122 801 219 11 11 chr20 13428723 13428901 -58724981 - LTR16C LTR ERVL 0 491 314 209 83 28 0 chr20 13429177 13429213 -58724669 + (TA)n Simple_repeat Simple_repeat 1 37 0 1771 118 4 0 chr20 13429218 13429480 -58724402 - L1PA13 LINE L1 -19 6144 5882 269 178 56 56 chr20 13429692 13429782 -58724100 + L1MD3 LINE L1 7892 7981 -14 1111 279 59 8 chr20 13429801 13430383 -58723499 + L1ME3A LINE L1 5537 6160 -2 205 292 21 0 chr20 13430405 13430453 -58723429 + L3 LINE CR1 1519 1567 -10 1268 254 91 39 chr20 13431130 13431645 -58722237 + MLT1H LTR MaLR 2 543 -6 208 182 23 0 chr20 13431816 13431860 -58722022 + (TCTA)n Simple_repeat Simple_repeat 4 48 0 1363 282 57 23 chr20 13431930 13432401 -58721481 - LTR16C LTR ERVL 0 491 5 205 211 0 18 chr20 13432603 13432660 -58721222 + (TAAA)n Simple_repeat Simple_repeat 4 59 0 312 330 26 17 chr20 13432946 13433061 -58720821 + L2 LINE L2 3197 3312 -1 243 0 0 0 chr20 13434554 13434581 -58719301 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1646 203 142 72 chr20 13434695 13434804 -58719078 + MLT1E1 LTR MaLR 1 101 -553 447 19 0 0 chr20 13434804 13434856 -58719026 + (TTATA)n Simple_repeat Simple_repeat 5 56 0 1646 203 142 72 chr20 13434856 13435357 -58718525 + MLT1E1 LTR MaLR 101 654 0 3471 267 48 28 chr20 13435429 13437206 -58716676 + L1M4 LINE L1 2517 4329 -1817 3474 261 53 49 chr20 13437213 13438387 -58715495 + L1MB3 LINE L1 11 1188 -5671 1107 165 25 0 chr20 13438393 13438593 -58715289 - MLT2B1 LTR ERVL -315 205 1 9332 227 37 32 chr20 13438671 13440217 -58713665 + L1MB3 LINE L1 2031 3568 -3423 2295 98 38 12 chr20 13440217 13440563 -58713319 - THE1A LTR MaLR 0 355 1 11748 92 5 2 chr20 13440563 13442139 -58711743 - THE1A-int LTR MaLR 0 1580 1 2533 79 35 0 chr20 13442139 13442482 -58711400 - THE1A LTR MaLR 0 355 1 9332 227 37 32 chr20 13442482 13442633 -58711249 + L1MB3 LINE L1 3568 3717 -3274 3026 121 58 10 chr20 13442633 13443114 -58710768 + MER84 LTR ERV1 1 504 -3 9332 227 37 32 chr20 13443114 13443374 -58710508 + L1MB3 LINE L1 3717 3974 -3017 1999 79 8 0 chr20 13443374 13443628 -58710254 - AluSq SINE Alu -17 296 41 9332 227 37 32 chr20 13443628 13445779 -58708103 + L1MB3 LINE L1 3974 6262 -729 1674 240 15 30 chr20 13445861 13446327 -58707555 - MER74B LTR ERVL -88 534 76 2874 182 47 16 chr20 13446343 13446771 -58707111 + L1MB3 LINE L1 6270 6730 -264 225 0 0 0 chr20 13446771 13446796 -58707086 + (CA)n Simple_repeat Simple_repeat 2 26 0 2874 182 47 16 chr20 13446796 13447070 -58706812 + L1MB3 LINE L1 6730 6994 0 205 308 0 0 chr20 13447091 13447143 -58706739 - MIR SINE MIR -206 56 5 708 217 18 49 chr20 13448067 13448293 -58705589 + MLT2C1 LTR ERVL 10 228 -169 245 352 28 0 chr20 13448640 13448748 -58705134 - LTR67 LTR ERVL -401 156 46 2347 84 0 0 chr20 13448788 13449073 -58704809 + AluSg SINE Alu 1 285 -25 585 308 38 24 chr20 13449331 13449623 -58704259 - MLT1I LTR MaLR 0 409 114 1497 68 155 14 chr20 13451078 13451285 -58702597 + AluY SINE Alu 69 304 -7 3595 99 41 2 chr20 13452357 13452890 -58700992 + MER41A LTR ERV1 1 554 0 2019 108 61 10 chr20 13455071 13455368 -58698514 - AluSx SINE Alu 0 312 1 204 213 43 0 chr20 13455542 13455589 -58698293 + T-rich Low_complexity Low_complexity 2 50 0 237 132 0 0 chr20 13455592 13455630 -58698252 + (TTCC)n Simple_repeat Simple_repeat 3 40 0 306 223 31 46 chr20 13456184 13456314 -58697568 + (TATATG)n Simple_repeat Simple_repeat 2 129 0 2417 66 0 7 chr20 13456894 13457197 -58696685 + AluY SINE Alu 1 301 -10 315 214 0 0 chr20 13457355 13457425 -58696457 + CT-rich Low_complexity Low_complexity 3 72 0 726 283 150 25 chr20 13457639 13458934 -58694948 + L1MC/D LINE L1 3797 5253 -893 505 234 16 0 chr20 13458966 13459090 -58694792 - MLT1D LTR MaLR -6 499 374 4156 147 16 42 chr20 13459091 13459926 -58693956 + L1MA7 LINE L1 5456 6268 -23 818 284 68 11 chr20 13459940 13460204 -58693678 - MLT1E2 LTR MaLR -143 483 205 225 0 0 0 chr20 13460209 13460234 -58693648 + (T)n Simple_repeat Simple_repeat 1 25 0 673 206 0 0 chr20 13460680 13460816 -58693066 - MLT1E2 LTR MaLR -315 190 55 263 303 76 42 chr20 13461022 13461286 -58692596 + L1MC/D LINE L1 5482 5754 -2054 757 277 136 25 chr20 13462605 13462622 -58691260 + LTR16C LTR ERVL 97 111 -380 213 65 0 0 chr20 13462622 13462653 -58691229 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 757 277 136 25 chr20 13462653 13462989 -58690893 + LTR16C LTR ERVL 111 489 -2 2782 32 0 0 chr20 13463492 13463808 -58690074 - AluYb8 SINE Alu -2 316 1 224 394 30 8 chr20 13464003 13464135 -58689747 + MER5A DNA MER1_type 54 188 -1 222 180 53 7 chr20 13466707 13466857 -58687025 + (TA)n Simple_repeat Simple_repeat 2 158 0 207 0 0 0 chr20 13466857 13466880 -58687002 + (CA)n Simple_repeat Simple_repeat 2 24 0 21 104 0 0 chr20 13468141 13468218 -58685664 + AT_rich Low_complexity Low_complexity 1 77 0 1528 209 212 9 chr20 13469816 13470265 -58683617 - MLT1F LTR MaLR 0 542 3 422 208 16 148 chr20 13470927 13471110 -58682772 + MER63 DNA MER1_type 1 785 -277 638 251 99 0 chr20 13471223 13471394 -58682488 - MER58A DNA MER1_type -1 223 36 695 261 52 93 chr20 13471440 13471904 -58681978 - LTR16A1 LTR ERVL -12 445 1 878 204 49 0 chr20 13471909 13472071 -58681811 - MER5A DNA MER1_type -4 185 16 1479 221 16 3 chr20 13522269 13522572 -58631310 - Tigger7 DNA MER2_type -2180 307 1 1312 235 28 89 chr20 13522572 13522964 -58630918 - MER31B-int LTR ERV1 -4554 382 15 1670 189 102 50 chr20 13523014 13523456 -58630426 - MER31B LTR ERV1 0 543 1 632 233 70 54 chr20 13523662 13523920 -58629962 + LTR37A LTR ERV1 43 304 -122 2195 116 7 0 chr20 13523975 13524267 -58629615 - AluSx SINE Alu -18 294 1 2393 71 3 0 chr20 13524372 13524667 -58629215 - AluY SINE Alu -15 296 1 364 270 33 46 chr20 13524677 13524829 -58629053 - MIR SINE MIR -43 219 70 1533 124 62 48 chr20 13524989 13525280 -58628602 + Tigger3(Golem) DNA MER2_type 2734 3028 -1 963 223 42 0 chr20 13526849 13527042 -58626840 + MIR SINE MIR 41 241 -21 2239 92 3 7 chr20 13527065 13527359 -58626523 - AluSx SINE Alu -17 295 3 899 179 67 40 chr20 13527414 13527638 -58626244 - AluJo SINE Alu -81 231 2 4035 121 47 0 chr20 13528467 13529102 -58624780 - L1P LINE L1 -1483 4663 3999 21 0 0 0 chr20 13529111 13529132 -58624750 + AT_rich Low_complexity Low_complexity 1 21 0 205 215 31 31 chr20 13529476 13529541 -58624341 + (TCTA)n Simple_repeat Simple_repeat 3 67 0 209 274 20 0 chr20 13529678 13529729 -58624153 + GA-rich Low_complexity Low_complexity 5 56 0 894 201 73 19 chr20 13529756 13530032 -58623850 + L1MC5 LINE L1 6959 7247 -728 1120 211 41 55 chr20 13530164 13530604 -58623278 + L1MC5 LINE L1 7268 7701 -260 390 246 108 0 chr20 13531342 13531472 -58622410 - L1MD2 LINE L1 -2 6357 6214 973 151 104 0 chr20 13531486 13531678 -58622204 - L1PA16 LINE L1 -17 6149 5938 618 200 5 116 chr20 13531672 13531887 -58621995 - L1MD2 LINE L1 -131 6228 6038 * 2136 101 3 3 chr20 13531887 13532175 -58621707 + AluSg SINE Alu 1 288 -22 241 287 30 20 chr20 13532328 13532429 -58621453 - MER5A DNA MER1_type 0 189 88 25 51 0 0 chr20 13532762 13532801 -58621081 + AT_rich Low_complexity Low_complexity 1 39 0 2414 82 77 14 chr20 13533139 13533503 -58620379 - L1PA11 LINE L1 -304 5870 5484 1055 178 6 0 chr20 13535645 13535819 -58618063 + AluJo SINE Alu 1 175 -137 983 188 6 0 chr20 13535974 13536155 -58617727 + AluJb SINE Alu 88 269 -43 265 258 141 55 chr20 13536405 13536533 -58617349 + MER5A DNA MER1_type 47 185 -4 197 328 0 0 chr20 13536507 13536568 -58617314 - L2 LINE L2 -7 3265 3205 * 2504 54 0 0 chr20 13536694 13536989 -58616893 - AluY SINE Alu -16 295 1 240 309 12 0 chr20 13537573 13537657 -58616225 + L1M4 LINE L1 4080 4164 -1982 344 308 119 63 chr20 13538102 13538451 -58615431 + L1MEd LINE L1 841 1178 -1329 377 314 174 4 chr20 13538510 13538746 -58615136 + L1MC4a LINE L1 5787 6062 -1746 613 283 40 5 chr20 13540841 13541064 -58612818 - L1ME LINE L1 -299 5822 5592 262 254 0 16 chr20 13541070 13541133 -58612749 + (CA)n Simple_repeat Simple_repeat 2 63 0 310 296 148 19 chr20 13541133 13541295 -58612587 - L1ME LINE L1 -531 5590 5408 25 0 0 0 chr20 13542142 13542167 -58611715 + AT_rich Low_complexity Low_complexity 1 25 0 18622 149 68 15 chr20 13542172 13545995 -58607887 + L1M1 LINE L1 24 4055 -3510 304 285 252 33 chr20 13546506 13546748 -58607134 + HAL1 LINE L1 826 1120 -1387 2483 187 74 135 chr20 13546887 13547035 -58606847 - MER21A LTR ERV1 -6 925 770 1876 144 20 23 chr20 13547035 13547334 -58606548 - AluSx SINE Alu -14 298 1 2483 187 74 135 chr20 13547334 13547453 -58606429 - MER21A LTR ERV1 -161 770 645 1960 163 0 3 chr20 13547453 13547754 -58606128 - AluJo SINE Alu -12 300 1 2483 187 74 135 chr20 13547754 13548458 -58605424 - MER21A LTR ERV1 -286 645 12 3608 98 159 111 chr20 13548553 13549883 -58603999 - pTR5 LTR ERV1 0 2438 742 914 277 73 52 chr20 13549887 13550518 -58603364 + L1MEd LINE L1 415 1058 -5061 28 0 0 0 chr20 13551226 13551254 -58602628 + AT_rich Low_complexity Low_complexity 1 28 0 220 315 11 11 chr20 13553053 13553142 -58600740 + (CG)n Simple_repeat Simple_repeat 1 89 0 443 293 38 25 chr20 13553644 13553801 -58600081 + L2 LINE L2 223 381 -2933 576 322 150 10 chr20 13554285 13554599 -58599283 + L2 LINE L2 2955 3312 -1 592 286 148 24 chr20 13554610 13554942 -58598940 + L2 LINE L2 2939 3311 -2 2516 62 0 16 chr20 13555314 13555645 -58598237 + AluSc SINE Alu 1 309 0 3243 178 18 26 chr20 13555653 13555776 -58598106 + L1MB5 LINE L1 5490 5613 -561 457 56 11 124 chr20 13555776 13555826 -58598056 - MADE1 DNA Mariner 0 80 43 2316 71 3 14 chr20 13555826 13556123 -58597759 + AluY SINE Alu 1 294 -17 457 56 11 124 chr20 13556123 13556161 -58597721 - MADE1 DNA Mariner -37 43 2 3243 178 18 26 chr20 13556161 13556722 -58597160 + L1MB5 LINE L1 5613 6168 -6 602 157 10 0 chr20 13556726 13556828 -58597054 + L1M4 LINE L1 5550 5652 -526 1210 147 118 0 chr20 13557260 13557471 -58596411 + MER46A DNA MER2_type 1 236 0 239 231 165 74 chr20 13557536 13557657 -58596225 - MIR3 SINE MIR -71 137 6 1709 161 67 85 chr20 13559494 13559930 -58593952 + MSTA LTR MaLR 1 428 0 531 234 133 37 chr20 13560149 13560337 -58593545 - MIR SINE MIR -12 250 45 718 289 118 22 chr20 13560678 13561180 -58592702 + Charlie7 DNA MER1_type 12 561 -2051 1179 78 0 0 chr20 13561453 13561595 -58592287 - AluSc SINE Alu -18 291 150 209 176 0 0 chr20 13561752 13561786 -58592096 + MIR SINE MIR 95 128 -134 * 489 242 81 34 chr20 13561784 13561933 -58591949 - MIR SINE MIR -91 171 16 450 245 29 0 chr20 13561959 13562061 -58591821 + MIR SINE MIR 158 262 0 570 211 0 0 chr20 13562504 13562627 -58591255 - AluSg/x SINE Alu -11 301 179 2516 153 52 74 chr20 13562815 13563307 -58590575 + LTR8A LTR ERV1 83 558 -169 1972 129 7 14 chr20 13563307 13563602 -58590280 + AluY SINE Alu 1 293 -18 2516 153 52 74 chr20 13563602 13563769 -58590113 + LTR8A LTR ERV1 558 727 0 778 168 121 39 chr20 13563856 13564088 -58589794 + LTR45B LTR ERV1 225 475 -14 355 184 143 7 chr20 13564159 13564306 -58589576 + L1M4c LINE L1 967 1133 -5251 5217 223 88 10 chr20 13564318 13566029 -58587853 + L1 LINE L1 2816 4660 -1486 1880 158 20 7 chr20 13566237 13566535 -58587347 + AluSx SINE Alu 1 302 -10 367 247 0 34 chr20 13567341 13567430 -58586452 + MIR SINE MIR 56 141 -121 182 340 125 43 chr20 13567900 13568291 -58585591 - L2 LINE L2 -339 2975 2553 295 350 43 21 chr20 13568303 13568489 -58585393 - L2 LINE L2 -1285 2029 1840 216 292 99 109 chr20 13568775 13568967 -58584915 + L2 LINE L2 2632 2821 -493 219 346 74 31 chr20 13570845 13571007 -58582875 - L2 LINE L2 -5 3308 3140 264 329 102 0 chr20 13571058 13571195 -58582687 - L2 LINE L2 -260 3012 2862 219 267 107 61 chr20 13571249 13571380 -58582502 - L2 LINE L2 -722 2592 2456 597 348 182 15 chr20 13572026 13572067 -58581815 + L2 LINE L2 1868 1901 -1413 1243 119 228 36 chr20 13572067 13572333 -58581549 + MER46B DNA MER2_type 1 208 -2523 1931 152 3 0 chr20 13572333 13572622 -58581260 - AluJb SINE Alu -22 290 1 1243 119 228 36 chr20 13572622 13572658 -58581224 + MER46B DNA MER2_type 208 236 0 597 348 182 15 chr20 13572658 13573302 -58580580 + L2 LINE L2 1901 2668 -646 821 251 76 5 chr20 13574168 13574379 -58579503 - MIR SINE MIR -11 251 26 375 240 0 0 chr20 13574531 13574606 -58579276 + MIR SINE MIR 67 141 -121 320 302 126 5 chr20 13575136 13575351 -58578531 + MER112 DNA MER1_type 8 248 -12 2358 82 0 3 chr20 13575401 13575706 -58578176 - AluY SINE Alu -7 304 1 2400 92 3 0 chr20 13575709 13576015 -58577867 - AluSc SINE Alu -1 308 2 216 0 0 0 chr20 13576367 13576391 -58577491 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 602 281 138 0 chr20 13577441 13577644 -58576238 - MIR SINE MIR -21 241 11 442 308 117 29 chr20 13577688 13578236 -58575646 + L1ME LINE L1 5272 5855 -266 220 260 315 22 chr20 13578350 13578531 -58575351 + MIR SINE MIR 15 248 -14 192 77 0 0 chr20 13579585 13579611 -58574271 + (GGGA)n Simple_repeat Simple_repeat 2 27 0 1947 139 0 17 chr20 13579655 13579957 -58573925 + AluSx SINE Alu 13 309 -3 1411 204 4 22 chr20 13580015 13580284 -58573598 + AluJo SINE Alu 1 264 -48 385 329 84 32 chr20 13580579 13580828 -58573054 - L3 LINE CR1 -12 1565 1304 1276 234 67 46 chr20 13581031 13581492 -58572390 + HsTC2a DNA Tc2 11 481 -263 25679 104 24 29 chr20 13581494 13587963 -58565919 + L1PA11 LINE L1 9 6475 -14 544 246 15 8 chr20 13588099 13588233 -58565649 - MER115 DNA AcHobo -107 586 452 180 0 0 0 chr20 13588237 13588257 -58565625 + (CACCC)n Simple_repeat Simple_repeat 2 21 0 2192 69 4 7 chr20 13588330 13588606 -58565276 - AluSp SINE Alu -8 305 31 2335 82 0 16 chr20 13589560 13589863 -58564019 + AluSc SINE Alu 1 298 -11 1270 138 13 5 chr20 13589863 13590087 -58563795 - Tigger1 DNA MER2_type -2192 226 1 2135 137 0 3 chr20 13590159 13590509 -58563373 - AluSx SINE Alu 0 349 1 355 224 51 31 chr20 13590581 13590679 -58563203 + MIR SINE MIR 97 196 -66 2301 110 0 3 chr20 13590769 13591069 -58562813 - AluSg SINE Alu -11 299 1 23 33 0 0 chr20 13591628 13591658 -58562224 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr20 13591822 13591850 -58562032 + AT_rich Low_complexity Low_complexity 1 28 0 25 0 0 0 chr20 13592290 13592315 -58561567 + AT_rich Low_complexity Low_complexity 1 25 0 436 213 0 0 chr20 13592497 13592591 -58561291 - MER92B LTR ERV1 0 636 543 1056 215 124 43 chr20 13592610 13592982 -58560900 - MER92B LTR ERV1 -233 403 2 2088 124 3 10 chr20 13593166 13593464 -58560418 + AluSx SINE Alu 1 296 -16 310 0 0 0 chr20 13593582 13593620 -58560262 - L1P LINE L1 -1823 4323 4286 232 132 0 57 chr20 13593620 13593673 -58560209 + Charlie5 DNA MER1_type 2514 2563 -49 2074 114 6 25 chr20 13593869 13594185 -58559697 + AluSg SINE Alu 1 310 0 1863 158 40 109 chr20 13594519 13594968 -58558914 - MER47B DNA MER2_type 0 418 1 21 0 0 0 chr20 13595157 13595178 -58558704 + AT_rich Low_complexity Low_complexity 1 21 0 1515 229 29 53 chr20 13595242 13595696 -58558186 + LTR47B LTR ERVL 1 443 0 500 308 107 48 chr20 13596243 13596597 -58557285 + L2 LINE L2 2381 2755 -559 989 199 112 64 chr20 13596607 13596964 -58556918 + MLT1A2 LTR MaLR 1 374 0 2319 112 0 0 chr20 13597116 13597411 -58556471 - AluSq SINE Alu -18 295 1 208 315 18 45 chr20 13597460 13597571 -58556311 + L2 LINE L2 2988 3095 -218 1813 156 0 48 chr20 13597608 13597922 -58555960 - AluSx SINE Alu -13 299 1 1332 203 103 32 chr20 13597926 13598296 -58555586 + MLT1D LTR MaLR 108 503 -2 473 167 0 0 chr20 13599737 13599809 -58554073 + tRNA-Glu-GAG tRNA tRNA 1 72 -3 1783 231 52 6 chr20 13599831 13600350 -58553532 + L1ME3A LINE L1 3802 4344 -1802 227 79 26 0 chr20 13601385 13601423 -58552459 + (TA)n Simple_repeat Simple_repeat 1 39 0 24 32 0 0 chr20 13601426 13601457 -58552425 + AT_rich Low_complexity Low_complexity 1 31 0 1255 250 91 48 chr20 13602371 13602873 -58551009 + L1ME3A LINE L1 5523 6057 -113 2405 86 0 0 chr20 13602873 13603165 -58550717 - AluSg SINE Alu -18 292 1 1255 250 91 48 chr20 13603165 13603281 -58550601 + L1ME3A LINE L1 6057 6167 -3 593 278 23 77 chr20 13604028 13604143 -58549739 - MIR SINE MIR -8 254 134 1932 128 52 6 chr20 13604143 13604488 -58549394 + MER46B DNA MER2_type 1 236 0 593 278 23 77 chr20 13604488 13604631 -58549251 - MIR SINE MIR -128 134 10 21 0 0 0 chr20 13605229 13605250 -58548632 + AT_rich Low_complexity Low_complexity 1 21 0 29 0 0 0 chr20 13605608 13605637 -58548245 + AT_rich Low_complexity Low_complexity 1 29 0 441 184 265 0 chr20 13606424 13606560 -58547322 - MER5B DNA MER1_type 0 178 7 378 281 100 97 chr20 13606872 13607653 -58546229 + L1M2 LINE L1 441 1289 -5560 230 308 169 30 chr20 13608372 13608609 -58545273 + L2 LINE L2 2025 2294 -1020 293 319 168 0 chr20 13608768 13608881 -58545001 - MIR3 SINE MIR -37 171 40 2141 93 4 0 chr20 13609460 13609765 -58544117 + AluSg SINE Alu 3 308 0 766 149 0 57 chr20 13609772 13609913 -58543969 + FLAM_C SINE Alu 11 143 0 220 333 73 49 chr20 13609994 13610117 -58543765 + L2 LINE L2 3142 3267 -5 21 57 0 0 chr20 13610193 13610228 -58543654 + AT_rich Low_complexity Low_complexity 1 35 0 2079 120 38 0 chr20 13610992 13611284 -58542598 + AluSx SINE Alu 3 305 -7 199 270 112 22 chr20 13611795 13611884 -58541998 - MIR SINE MIR -30 232 136 2544 269 91 63 chr20 13612016 13612478 -58541404 - L2 LINE L2 0 3313 2866 2042 131 3 22 chr20 13612478 13612792 -58541090 - AluSx SINE Alu -4 308 1 2544 269 91 63 chr20 13612792 13613220 -58540662 - L2 LINE L2 -447 2866 2452 394 46 215 0 chr20 13613220 13613285 -58540597 - MADE1 DNA Mariner -1 79 1 2544 269 91 63 chr20 13613285 13613706 -58540176 - L2 LINE L2 -861 2452 1950 665 268 56 4 chr20 13614602 13614833 -58539049 + HAL1 LINE L1 3 245 -2262 321 235 86 74 chr20 13614856 13615018 -58538864 + HAL1 LINE L1 311 474 -2033 255 220 98 61 chr20 13615194 13615326 -58538556 + HAL1 LINE L1 2354 2490 -17 302 304 48 68 chr20 13616784 13616991 -58536891 + L2 LINE L2 1868 2070 -1244 21 36 0 0 chr20 13617508 13617536 -58536346 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr20 13617688 13617716 -58536166 + AT_rich Low_complexity Low_complexity 1 28 0 204 219 0 0 chr20 13618481 13618522 -58535360 + A-rich Low_complexity Low_complexity 5 45 0 24 32 0 0 chr20 13619146 13619177 -58534705 + AT_rich Low_complexity Low_complexity 1 31 0 2068 145 3 10 chr20 13619911 13620222 -58533660 - AluSg SINE Alu -1 309 1 760 201 121 69 chr20 13620369 13620845 -58533037 - MLT1H LTR MaLR -4 545 5 291 216 171 11 chr20 13621805 13621893 -58531989 + MIR SINE MIR 13 114 -148 276 289 0 25 chr20 13622072 13622193 -58531689 + HAL1 LINE L1 1632 1749 -758 329 273 79 68 chr20 13622502 13622961 -58530921 + L1M3 LINE L1 4588 5001 -1167 1915 140 0 34 chr20 13622961 13623280 -58530602 + AluSx SINE Alu 1 309 0 329 273 79 68 chr20 13623280 13623732 -58530150 + L1M3 LINE L1 5001 5447 -721 28 71 0 0 chr20 13623782 13623838 -58530044 + AT_rich Low_complexity Low_complexity 1 56 0 2156 126 3 0 chr20 13623849 13624142 -58529740 - AluSq SINE Alu -19 294 1 226 323 25 35 chr20 13624161 13624362 -58529520 + L1MC/D LINE L1 5526 5724 -2084 673 206 0 0 chr20 13624622 13624758 -58529124 + MLT1E2 LTR MaLR 55 190 -315 225 0 0 0 chr20 13625204 13625229 -58528653 + (A)n Simple_repeat Simple_repeat 1 25 0 818 284 68 11 chr20 13625234 13625498 -58528384 + MLT1E2 LTR MaLR 205 483 -143 4156 147 16 42 chr20 13625512 13626347 -58527535 - L1MA7 LINE L1 -23 6268 5456 505 234 16 0 chr20 13626348 13626472 -58527410 + MLT1D LTR MaLR 374 499 -6 726 283 150 25 chr20 13626504 13627799 -58526083 - L1M4 LINE L1 -893 5253 3797 315 214 0 0 chr20 13628013 13628083 -58525799 + GA-rich Low_complexity Low_complexity 3 72 0 2426 66 0 7 chr20 13628241 13628545 -58525337 - AluY SINE Alu -9 302 1 306 223 31 46 chr20 13629125 13629255 -58524627 + (CATATA)n Simple_repeat Simple_repeat 2 129 0 237 132 0 0 chr20 13629809 13629847 -58524035 + (GGAA)n Simple_repeat Simple_repeat 3 40 0 204 213 43 0 chr20 13629850 13629897 -58523985 + A-rich Low_complexity Low_complexity 2 50 0 2019 108 61 10 chr20 13630071 13630368 -58523514 + AluSx SINE Alu 1 312 0 3595 99 41 2 chr20 13632549 13633082 -58520800 - MER41A LTR ERV1 0 554 1 1497 68 155 14 chr20 13634154 13634361 -58519521 - AluY SINE Alu -7 304 69 585 308 38 24 chr20 13635816 13636108 -58517774 + MLT1I LTR MaLR 114 409 0 2347 84 0 0 chr20 13636366 13636651 -58517231 - AluSg SINE Alu -25 285 1 245 352 28 0 chr20 13636691 13636799 -58517083 + LTR67 LTR ERVL 46 156 -401 708 217 18 49 chr20 13637146 13637372 -58516510 - MLT2C1 LTR ERVL -169 228 10 263 303 76 42 chr20 13638084 13638348 -58515534 + L1MC/D LINE L1 5482 5754 -2054 757 277 136 25 chr20 13639667 13639684 -58514198 + LTR16C LTR ERVL 97 111 -380 213 65 0 0 chr20 13639684 13639715 -58514167 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 757 277 136 25 chr20 13639715 13640051 -58513831 + LTR16C LTR ERVL 111 489 -2 2782 32 0 0 chr20 13640554 13640870 -58513012 - AluYb8 SINE Alu -2 316 1 224 394 30 8 chr20 13641065 13641197 -58512685 + MER5A DNA MER1_type 54 188 -1 222 180 53 7 chr20 13643769 13643919 -58509963 + (TA)n Simple_repeat Simple_repeat 2 158 0 207 0 0 0 chr20 13643919 13643942 -58509940 + (CA)n Simple_repeat Simple_repeat 2 24 0 21 104 0 0 chr20 13645203 13645280 -58508602 + AT_rich Low_complexity Low_complexity 1 77 0 1528 209 212 9 chr20 13646878 13647327 -58506555 - MLT1F LTR MaLR 0 542 3 422 208 16 148 chr20 13647989 13648172 -58505710 + MER63 DNA MER1_type 1 785 -277 638 251 99 0 chr20 13648285 13648456 -58505426 - MER58A DNA MER1_type -1 223 36 695 261 52 93 chr20 13648502 13648966 -58504916 - LTR16A1 LTR ERVL -12 445 1 878 204 49 0 chr20 13648971 13649133 -58504749 - MER5A DNA MER1_type -4 185 16 1410 67 6 0 chr20 13650409 13650587 -58503295 + AluY SINE Alu 120 298 -13 1166 160 58 48 chr20 13650930 13651242 -58502640 - MER33 DNA MER1_type -9 315 1 209 364 68 0 chr20 13651243 13651331 -58502551 - MIR3 SINE MIR -49 159 66 860 267 5 24 chr20 13651468 13651674 -58502208 + MIR SINE MIR 3 204 -58 315 0 0 0 chr20 13652265 13652300 -58501582 + (TC)n Simple_repeat Simple_repeat 2 36 0 * 441 0 0 0 chr20 13652299 13652348 -58501534 + (TG)n Simple_repeat Simple_repeat 2 50 0 265 333 24 0 chr20 13653517 13653601 -58500281 + MIR SINE MIR 70 156 -52 303 260 0 0 chr20 13653853 13653926 -58499956 - MIR SINE MIR -19 243 171 262 364 50 0 chr20 13653962 13654102 -58499780 - LTR16C LTR ERVL 0 491 345 41202 29 21 1 chr20 13654591 13660616 -58493266 + L1HS LINE L1 5 6153 -2 201 162 0 0 chr20 13660617 13660654 -58493228 + A-rich Low_complexity Low_complexity 1 37 0 6195 133 12 9 chr20 13660656 13661846 -58492036 + L1MA4A LINE L1 5105 6301 -2 2177 142 0 0 chr20 13661846 13662155 -58491727 + AluSx SINE Alu 1 309 -3 261 366 98 6 chr20 13662816 13662980 -58490902 - MER5A DNA MER1_type -1 188 10 658 159 15 8 chr20 13663659 13663791 -58490091 + L1MB4 LINE L1 6042 6174 -6 308 263 42 55 chr20 13664775 13664949 -58488933 + MLT1I LTR MaLR 99 212 -197 313 289 53 109 chr20 13665086 13665233 -58488649 - L1MEc LINE L1 -3927 2383 2229 926 202 5 5 chr20 13665233 13665421 -58488461 - MER5A DNA MER1_type 0 189 2 313 289 53 109 chr20 13665421 13665630 -58488252 - L1MEc LINE L1 -4081 2229 2047 285 258 97 61 chr20 13666253 13666614 -58487268 - L1MEc LINE L1 -5061 1058 685 1565 199 28 20 chr20 13666621 13666978 -58486904 + MLT1A1 LTR MaLR 5 364 -1 446 226 10 0 chr20 13667045 13667147 -58486735 + MER5A DNA MER1_type 9 111 -78 289 309 32 82 chr20 13667266 13667645 -58486237 - L1MEc LINE L1 -5552 567 208 409 284 128 20 chr20 13667996 13668200 -58485682 - MIR SINE MIR -35 227 2 4064 221 71 59 chr20 13668229 13669571 -58484311 + MER52A LTR ERV1 1 1358 -397 325 284 9 9 chr20 13670343 13670452 -58483430 + GA-rich Low_complexity Low_complexity 2 110 0 21 71 0 0 chr20 13671177 13671219 -58482663 + AT_rich Low_complexity Low_complexity 1 42 0 180 0 0 0 chr20 13671219 13671239 -58482643 + (TG)n Simple_repeat Simple_repeat 2 21 0 * 483 100 0 0 chr20 13671238 13671308 -58482574 + (TA)n Simple_repeat Simple_repeat 1 70 0 240 250 58 0 chr20 13671367 13671523 -58482359 + (TA)n Simple_repeat Simple_repeat 2 166 0 30 123 0 0 chr20 13671523 13671735 -58482147 + AT_rich Low_complexity Low_complexity 1 212 0 21 36 0 0 chr20 13671882 13671910 -58481972 + AT_rich Low_complexity Low_complexity 1 28 0 687 252 78 88 chr20 13672065 13672599 -58481283 - MER34B LTR ERV1 -2 540 1 867 291 89 0 chr20 13672818 13673144 -58480738 + MLT1H LTR MaLR 1 355 -194 679 209 162 0 chr20 13673918 13674066 -58479816 - MER5A DNA MER1_type -8 181 10 496 203 203 38 chr20 13674671 13674829 -58479053 + MER5A DNA MER1_type 5 188 -1 207 235 10 92 chr20 13674962 13675060 -58478822 + MIR SINE MIR 142 231 -31 335 225 0 0 chr20 13676118 13676198 -58477684 + MER116 DNA Mariner 1 80 0 648 208 168 12 chr20 13677783 13678033 -58475849 + MER5C DNA MER1_type 1 289 -35 212 289 108 24 chr20 13678155 13678238 -58475644 - L3b LINE CR1 -115 1468 1379 4275 179 32 15 chr20 13678582 13680154 -58473728 + L1MA9 LINE L1 4382 6170 -142 342 0 0 0 chr20 13680154 13680192 -58473690 + (CA)n Simple_repeat Simple_repeat 1 38 0 4275 179 32 15 chr20 13680192 13680299 -58473583 + L1MA9 LINE L1 6170 6274 -38 24 0 0 0 chr20 13680299 13680323 -58473559 + AT_rich Low_complexity Low_complexity 1 24 0 39 50 0 0 chr20 13681178 13681238 -58472644 + AT_rich Low_complexity Low_complexity 1 60 0 323 302 99 40 chr20 13681474 13681676 -58472206 - L1ME3A LINE L1 -220 6019 5806 1584 259 159 6 chr20 13681676 13682217 -58471665 + MLT1E3 LTR MaLR 1 624 0 618 238 49 74 chr20 13682244 13682681 -58471201 - L1ME3A LINE L1 -457 5782 5346 622 276 48 81 chr20 13682831 13683160 -58470722 - L1ME3A LINE L1 -1465 4750 4412 5978 109 37 47 chr20 13683160 13684285 -58469597 - L1PA12 LINE L1 0 6168 5033 2054 119 3 7 chr20 13684285 13684578 -58469304 - AluSx SINE Alu -20 292 1 5978 109 37 47 chr20 13684578 13684634 -58469248 - L1PA12 LINE L1 -1135 5033 4993 1832 156 49 0 chr20 13684634 13684922 -58468960 - AluJb SINE Alu -10 302 1 5978 109 37 47 chr20 13684922 13684992 -58468890 - L1PA12 LINE L1 -1175 4993 4924 622 276 48 81 chr20 13684992 13685325 -58468557 - L1ME3A LINE L1 -1803 4412 4110 1423 253 0 17 chr20 13685325 13685681 -58468201 + MLT2D LTR ERVL 3 352 -62 307 71 0 0 chr20 13685748 13685790 -58468092 + MLT2D LTR ERVL 479 520 0 282 265 81 96 chr20 13685832 13686251 -58467631 - L1ME3A LINE L1 -2145 4070 3658 491 251 98 81 chr20 13686596 13686903 -58466979 - L1ME3A LINE L1 -2947 3268 2957 22 0 0 0 chr20 13688103 13688125 -58465757 + AT_rich Low_complexity Low_complexity 1 22 0 459 333 43 0 chr20 13688796 13688934 -58464948 + L2 LINE L2 3112 3255 -17 2525 63 0 13 chr20 13689426 13689741 -58464141 - AluY SINE Alu 0 311 1 663 306 80 45 chr20 13690513 13691141 -58462741 - L1MEc LINE L1 -3526 2689 2074 1352 239 5 51 chr20 13692678 13693050 -58460832 + MLT2C1 LTR ERVL 2 355 -42 243 61 0 0 chr20 13693050 13693083 -58460799 + (TG)n Simple_repeat Simple_repeat 2 34 0 1352 239 5 51 chr20 13693083 13693125 -58460757 + MLT2C1 LTR ERVL 355 397 0 1870 287 30 6 chr20 13693125 13694156 -58459726 + ERVL-C1 LTR ERVL 1 1132 -4632 813 263 33 8 chr20 13694154 13694397 -58459485 + ERVL-C1 LTR ERVL 1637 1885 -3879 * 5308 213 66 18 chr20 13694402 13695705 -58458177 + ERVL-C1 LTR ERVL 4391 5756 -8 425 167 0 0 chr20 13695705 13695777 -58458105 + MLT2C1 LTR ERVL 1 72 -325 216 322 260 14 chr20 13695900 13696046 -58457836 - MIR SINE MIR -49 213 32 32 26 0 0 chr20 13696238 13696277 -58457605 + AT_rich Low_complexity Low_complexity 1 39 0 31 26 0 0 chr20 13696406 13696444 -58457438 + AT_rich Low_complexity Low_complexity 1 38 0 193 378 22 11 chr20 13696666 13696756 -58457126 + L2 LINE L2 3190 3280 -33 214 286 48 0 chr20 13698323 13698386 -58455496 + MIR3 SINE MIR 95 160 -48 216 0 0 0 chr20 13699137 13699161 -58454721 + (T)n Simple_repeat Simple_repeat 1 24 0 856 281 89 36 chr20 13699709 13700125 -58453757 + LTR16A1 LTR ERVL 5 442 -15 705 116 174 29 chr20 13700352 13700490 -58453392 - FRAM SINE Alu -13 163 6 255 305 143 22 chr20 13700497 13700720 -58453162 - MIR SINE MIR -11 251 2 675 271 110 57 chr20 13700777 13701160 -58452722 + MER90 LTR ERV1 153 555 -20 1384 273 138 12 chr20 13701302 13701889 -58451993 - HsTC2c DNA Tc2 -67 662 2 664 234 57 139 chr20 13702454 13702907 -58450975 + LTR16A1 LTR ERVL 15 430 -27 32 43 0 0 chr20 13703870 13703916 -58449966 + AT_rich Low_complexity Low_complexity 1 46 0 996 241 9 0 chr20 13704214 13704426 -58449456 - MER58A DNA MER1_type -10 214 1 545 355 13 13 chr20 13704786 13704841 -58449041 - MIR SINE MIR -6 256 202 2237 100 0 13 chr20 13704841 13705151 -58448731 - AluSx SINE Alu -6 306 1 545 355 13 13 chr20 13705151 13705326 -58448556 - MIR SINE MIR -59 203 26 358 280 169 62 chr20 13705722 13705827 -58448055 - MIR SINE MIR -12 250 158 2252 112 13 49 chr20 13705827 13706212 -58447670 - THE1C LTR MaLR -4 371 1 358 280 169 62 chr20 13706212 13706331 -58447551 - MIR SINE MIR -104 158 2 2478 204 22 53 chr20 13706700 13707329 -58446553 + L1ME2 LINE L1 5436 6040 -124 2144 101 0 44 chr20 13707329 13707646 -58446236 - AluSx SINE Alu -9 303 1 2478 204 22 53 chr20 13707646 13707758 -58446124 + L1ME2 LINE L1 6040 6154 -10 330 277 37 49 chr20 13710017 13710231 -58443651 - MER58 DNA MER1_type -4 2416 2 239 331 65 19 chr20 13710436 13710590 -58443292 + MIR SINE MIR 53 213 -49 504 329 161 35 chr20 13710948 13711804 -58442078 + L2 LINE L2 1762 2725 -589 192 336 99 53 chr20 13711977 13712108 -58441774 + L2 LINE L2 3136 3272 0 4258 159 28 11 chr20 13712998 13713879 -58440003 + L1MC2 LINE L1 5186 6082 -262 1253 132 9 23 chr20 13713879 13714098 -58439784 + L1MC1 LINE L1 6117 6333 0 674 195 65 12 chr20 13714119 13714288 -58439594 + LTR16A1 LTR ERVL 280 457 0 1258 213 146 29 chr20 13714554 13715005 -58438877 - MLT1D LTR MaLR 0 505 2 2096 85 0 0 chr20 13715037 13715327 -58438555 - AluSx SINE Alu 0 311 22 200 194 0 0 chr20 13715503 13715539 -58438343 - MIR SINE MIR -108 154 119 511 320 39 0 chr20 13716420 13716601 -58437281 + MER5A DNA MER1_type 1 188 -1 833 217 46 6 chr20 13716610 13716785 -58437097 - MER5A DNA MER1_type 0 189 8 21 36 0 0 chr20 13716858 13716886 -58436996 + AT_rich Low_complexity Low_complexity 1 28 0 27 49 0 0 chr20 13718563 13718604 -58435278 + AT_rich Low_complexity Low_complexity 1 41 0 558 224 100 60 chr20 13718969 13719268 -58434614 - LTR16A1 LTR ERVL 0 457 147 1600 214 55 94 chr20 13719552 13719765 -58434117 - MLT1H LTR MaLR 0 549 329 2192 94 28 3 chr20 13719765 13720052 -58433830 + AluSp SINE Alu 11 304 -9 1600 214 55 94 chr20 13720052 13720361 -58433521 - MLT1H LTR MaLR -220 329 47 281 26 26 0 chr20 13720681 13720719 -58433163 + (TG)n Simple_repeat Simple_repeat 2 40 0 539 214 60 12 chr20 13721023 13721191 -58432691 + MER104 DNA MER2_type 4 179 -1 2332 98 0 13 chr20 13721686 13721993 -58431889 + AluSg1 SINE Alu 6 308 -1 332 277 54 31 chr20 13722357 13722487 -58431395 - MIR SINE MIR -107 155 23 221 326 22 43 chr20 13722552 13722644 -58431238 + MIR SINE MIR 59 145 -63 329 298 5 66 chr20 13722964 13723162 -58430720 - MER117 DNA MER1_type -11 186 1 239 333 99 54 chr20 13723483 13723705 -58430177 + L2 LINE L2 3020 3251 -21 40 99 0 0 chr20 13724083 13724214 -58429668 + AT_rich Low_complexity Low_complexity 1 131 0 23 0 0 0 chr20 13724886 13724909 -58428973 + AT_rich Low_complexity Low_complexity 1 23 0 841 234 16 11 chr20 13725578 13725766 -58428116 + MER5A DNA MER1_type 1 189 0 252 300 71 47 chr20 13725778 13725948 -58427934 + L2 LINE L2 1624 1797 -1517 344 288 66 38 chr20 13725951 13726163 -58427719 + L1M3c LINE L1 535 752 -5911 295 314 11 49 chr20 13726174 13726359 -58427523 + L1M3c LINE L1 1262 1439 -5214 657 231 70 70 chr20 13726747 13726996 -58426886 + L1M3c LINE L1 1439 1687 -4976 2326 91 0 7 chr20 13726996 13727292 -58426590 - AluSx SINE Alu -18 294 1 657 231 70 70 chr20 13727292 13727368 -58426514 + L1M3c LINE L1 1687 1762 -4901 216 0 0 0 chr20 13727368 13727392 -58426490 + (CA)n Simple_repeat Simple_repeat 2 25 0 657 231 70 70 chr20 13727392 13727523 -58426359 + L1M3c LINE L1 1761 1896 -4767 * 8369 242 40 44 chr20 13727517 13728402 -58425480 + L1M4c LINE L1 1200 2087 -4295 2217 73 0 21 chr20 13728402 13728688 -58425194 + AluSp SINE Alu 24 303 -10 8369 242 40 44 chr20 13728688 13729620 -58424262 + L1M4c LINE L1 2087 3021 -3361 1602 122 0 0 chr20 13729620 13729834 -58424048 + AluSq SINE Alu 5 218 -95 8369 242 40 44 chr20 13729834 13729937 -58423945 + L1M4c LINE L1 3021 3123 -3259 3868 48 27 0 chr20 13729937 13730414 -58423468 + LTR2B LTR ERV1 1 490 0 8369 242 40 44 chr20 13730414 13731097 -58422785 + L1M4c LINE L1 3123 3807 -2575 2563 56 0 0 chr20 13731097 13731403 -58422479 + AluY SINE Alu 1 306 -5 8369 242 40 44 chr20 13731403 13732683 -58421199 + L1M4c LINE L1 3807 5148 -1234 318 256 30 113 chr20 13732692 13732860 -58421022 + L2 LINE L2 3113 3266 -47 232 354 80 18 chr20 13732919 13733032 -58420850 + L2 LINE L2 2937 3056 -216 951 293 85 24 chr20 13733670 13734094 -58419788 + LTR16A1 LTR ERVL 8 457 0 784 179 0 15 chr20 13734120 13734254 -58419628 + FLAM_C SINE Alu 1 132 -1 210 91 0 0 chr20 13735093 13735126 -58418756 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 241 304 78 0 chr20 13735355 13735470 -58418412 + L1MC/D LINE L1 5759 5882 -1926 189 147 0 0 chr20 13735600 13735634 -58418248 + (CATATA)n Simple_repeat Simple_repeat 5 38 0 2103 72 41 31 chr20 13735748 13736040 -58417842 - AluY SINE Alu -16 295 1 299 436 0 0 chr20 13737272 13737435 -58416447 - MIR3 SINE MIR -13 195 33 1942 98 16 0 chr20 13737596 13737850 -58416032 - AluSq SINE Alu -55 258 1 674 245 103 5 chr20 13737953 13738247 -58415635 + LTR16A1 LTR ERVL 55 407 -50 2607 185 30 18 chr20 13738848 13739350 -58414532 + MLT2B3 LTR ERVL 1 508 -46 602 280 23 23 chr20 13739657 13739832 -58414050 + MER5B DNA MER1_type 4 178 0 314 292 0 0 chr20 13740060 13740125 -58413757 + L2 LINE L2 3249 3313 0 397 254 212 0 chr20 13740541 13740659 -58413223 + MER5A DNA MER1_type 47 189 0 352 325 54 80 chr20 13741316 13741777 -58412105 + L1M4c LINE L1 1040 1488 -4896 30 83 0 0 chr20 13742152 13742224 -58411658 + AT_rich Low_complexity Low_complexity 1 72 0 510 334 67 26 chr20 13742651 13743112 -58410770 + L1M4c LINE L1 2367 2846 -3536 242 349 42 21 chr20 13743268 13743509 -58410373 + L1M4c LINE L1 3024 3269 -3113 356 335 36 23 chr20 13743589 13743810 -58410072 + L1M4c LINE L1 3389 3612 -2770 180 0 0 0 chr20 13744337 13744357 -58409525 + (CA)n Simple_repeat Simple_repeat 1 20 0 481 232 136 34 chr20 13744696 13744873 -58409009 - MLT1H LTR MaLR -15 534 340 826 303 54 4 chr20 13745009 13745286 -58408596 - MLT1H LTR MaLR -245 304 14 1117 236 75 96 chr20 13745644 13746114 -58407768 - LTR16C LTR ERVL -2 489 30 296 284 0 12 chr20 13746415 13746496 -58407386 + L2 LINE L2 3234 3313 0 421 245 10 0 chr20 13746986 13747084 -58406798 - L1ME3A LINE L1 -5 6165 6067 217 262 83 36 chr20 13747527 13747611 -58406271 + L2 LINE L2 3221 3308 -5 24485 165 12 25 chr20 13749951 13756009 -58397873 + L1PA10 LINE L1 496 6481 -2 293 330 102 35 chr20 13757626 13757911 -58395971 + L2 LINE L2 2562 2865 -449 623 313 48 40 chr20 13758198 13758447 -58395435 + MLT1J2 LTR MaLR 50 300 -150 218 367 0 0 chr20 13758516 13758576 -58395306 + L2 LINE L2 3195 3254 -18 2107 103 0 40 chr20 13758760 13759060 -58394822 + AluSg SINE Alu 3 290 -20 273 295 39 47 chr20 13759222 13759351 -58394531 + MIR SINE MIR 27 154 -108 482 353 59 8 chr20 13759786 13760024 -58393858 + MIR SINE MIR 5 254 -8 299 311 49 60 chr20 13760354 13761330 -58392552 - L1M4 LINE L1 -1440 4706 3742 650 299 168 38 chr20 13761513 13762619 -58391263 - L1M4 LINE L1 -2682 3464 2215 329 250 42 0 chr20 13763193 13763289 -58390593 + MIR SINE MIR 83 182 -80 2031 95 0 4 chr20 13763430 13763747 -58390135 - AluSc SINE Alu 0 356 41 429 253 170 11 chr20 13764018 13764205 -58389677 + MIR SINE MIR 50 262 0 766 206 83 89 chr20 13767748 13768074 -58385808 - MER5C DNA MER1_type 0 324 1 1987 122 26 3 chr20 13768637 13768941 -58384941 + AluSq SINE Alu 1 311 -2 684 56 0 0 chr20 13768956 13769045 -58384837 + (GGAA)n Simple_repeat Simple_repeat 4 92 0 349 329 29 15 chr20 13769393 13769530 -58384352 + MER117 DNA MER1_type 36 174 -23 399 324 39 11 chr20 13769797 13769979 -58383903 - MIR3 SINE MIR -3 205 19 186 321 104 28 chr20 13769990 13770096 -58383786 - L2 LINE L2 -794 2520 2407 379 251 2 16 chr20 13770213 13770324 -58383558 - MLT1I LTR MaLR -2 424 320 503 205 33 16 chr20 13770385 13770507 -58383375 - MLT1I LTR MaLR -231 178 55 246 136 0 0 chr20 13771116 13771160 -58382722 + (A)n Simple_repeat Simple_repeat 1 44 0 232 270 14 0 chr20 13771689 13771763 -58382119 - L1MC/D LINE L1 -759 5585 5511 695 258 127 36 chr20 13772344 13772722 -58381160 + MER57A LTR ERV1 20 401 -2 457 310 42 15 chr20 13772903 13773235 -58380647 - L1MEd LINE L1 -3573 2556 2216 21 36 0 0 chr20 13773735 13773763 -58380119 + AT_rich Low_complexity Low_complexity 1 28 0 755 274 105 21 chr20 13773785 13774398 -58379484 - L1MEd LINE L1 -4655 1655 970 968 138 62 5 chr20 13774708 13774932 -58378950 + MER33 DNA MER1_type 53 289 -35 261 276 16 24 chr20 13775064 13775187 -58378695 - L1MEd LINE L1 -5289 830 709 434 302 13 13 chr20 13775356 13775515 -58378367 - L1ME3A LINE L1 -1 6169 6011 342 0 0 0 chr20 13775519 13775557 -58378325 + (TG)n Simple_repeat Simple_repeat 2 39 0 217 229 21 0 chr20 13775895 13775943 -58377939 + GA-rich Low_complexity Low_complexity 2 50 0 307 288 96 16 chr20 13775970 13776220 -58377662 + L1ME4a LINE L1 5754 6023 -98 594 253 93 0 chr20 13776971 13777121 -58376761 + MER5A DNA MER1_type 25 188 -1 2050 80 91 14 chr20 13777657 13777944 -58375938 + AluSp SINE Alu 3 311 -2 1957 183 8 11 chr20 13778229 13778595 -58375287 - MLT1A1 LTR MaLR 0 365 1 537 306 128 26 chr20 13778799 13779103 -58374779 - MLT1H LTR MaLR -214 335 1 594 301 92 68 chr20 13779104 13779572 -58374310 + L2 LINE L2 2487 2965 -349 8754 178 28 39 chr20 13780348 13780547 -58373335 - L1MA9 LINE L1 -282 6030 5830 1932 168 0 0 chr20 13780547 13780845 -58373037 - AluJb SINE Alu -14 298 1 8754 178 28 39 chr20 13780845 13782314 -58371568 - L1MA9 LINE L1 -482 5830 4388 1723 173 92 24 chr20 13782314 13782685 -58371197 - MSTD LTR MaLR 0 396 1 8754 178 28 39 chr20 13782685 13783596 -58370286 - L1MA9 LINE L1 -1924 4388 3469 1241 124 0 40 chr20 13783613 13783814 -58370068 - AluSg/x SINE Alu 0 312 120 661 200 0 19 chr20 13783816 13783971 -58369911 - L1MA9 LINE L1 -2675 3471 3320 1216 177 52 0 chr20 13783971 13784207 -58369675 + L1MA9 LINE L1 6051 6312 0 7419 42 2 8 chr20 13784337 13785599 -58368283 - L1PA5 LINE L1 -2 6152 4894 7317 45 4 0 chr20 13785599 13786506 -58367376 + L1PA5 LINE L1 3968 4878 -1268 216 340 129 27 chr20 13787301 13787448 -58366434 - MER5B DNA MER1_type -16 162 1 1054 237 153 58 chr20 13787502 13787642 -58366240 - MLT1H LTR MaLR -2 547 422 2028 157 97 40 chr20 13787642 13787743 -58366139 + MSTA LTR MaLR 4 98 -330 2080 120 0 44 chr20 13787743 13788060 -58365822 - AluY SINE Alu -8 303 1 2028 157 97 40 chr20 13788060 13788360 -58365522 + MSTA LTR MaLR 98 428 0 1054 237 153 58 chr20 13788360 13788717 -58365165 - MLT1H LTR MaLR -127 422 3 574 287 11 55 chr20 13789451 13789632 -58364250 - MER5B DNA MER1_type 0 178 6 184 256 115 39 chr20 13789655 13789733 -58364149 - L2 LINE L2 -1 3271 3188 345 388 22 27 chr20 13789937 13790161 -58363721 + MIR SINE MIR 30 252 -10 1174 289 73 145 chr20 13790984 13791425 -58362457 + L2 LINE L2 95 566 -2748 1771 144 28 7 chr20 13791425 13791709 -58362173 - AluJb SINE Alu -11 301 12 1174 289 73 145 chr20 13791709 13792322 -58361560 + L2 LINE L2 566 1221 -2093 1500 156 21 64 chr20 13792322 13792604 -58361278 + AluJb SINE Alu 28 297 -15 402 21 0 0 chr20 13792611 13792658 -58361224 + (CA)n Simple_repeat Simple_repeat 2 48 0 1174 289 73 145 chr20 13792658 13792875 -58361007 + L2 LINE L2 1227 1458 -1856 230 213 0 0 chr20 13792875 13792922 -58360960 - MLT1I LTR MaLR -263 146 100 1174 289 73 145 chr20 13792922 13794457 -58359425 + L2 LINE L2 1458 2752 -562 894 206 123 4 chr20 13794458 13794686 -58359196 - MLT1G LTR MaLR 0 590 336 1883 218 64 57 chr20 13794707 13795268 -58358614 + L1MCb LINE L1 413 975 -5124 438 53 0 0 chr20 13795268 13795325 -58358557 + (CA)n Simple_repeat Simple_repeat 2 58 0 1883 218 64 57 chr20 13795325 13795602 -58358280 + L1MCb LINE L1 975 1248 -4851 * 5692 203 38 33 chr20 13795601 13796493 -58357389 + L1MC3 LINE L1 5055 4652 -1494 2185 150 18 10 chr20 13796493 13796880 -58357002 + MLT1B LTR MaLR 1 390 0 5692 203 38 33 chr20 13796880 13797637 -58356245 + L1MC3 LINE L1 4651 5403 -743 310 220 113 81 chr20 13797668 13797809 -58356073 + L1MD3 LINE L1 6847 6997 -998 2420 176 31 0 chr20 13797809 13798224 -58355658 + MSTA LTR MaLR 1 428 0 310 220 113 81 chr20 13798224 13798268 -58355614 + L1MD3 LINE L1 6997 7038 -957 2542 164 40 31 chr20 13798279 13798858 -58355024 + L1MC3 LINE L1 7201 7784 -1 3765 180 19 12 chr20 13798870 13799672 -58354210 + L1MB7 LINE L1 5347 6153 -31 233 170 6 39 chr20 13799673 13799734 -58354148 - Charlie5 DNA MER1_type -200 2412 2327 723 205 152 0 chr20 13799803 13799954 -58353928 + MER5A DNA MER1_type 10 183 -6 24 0 0 0 chr20 13800459 13800483 -58353399 + AT_rich Low_complexity Low_complexity 1 24 0 2097 121 7 0 chr20 13801542 13801840 -58352042 + AluSx SINE Alu 2 301 -11 24 0 0 0 chr20 13801935 13801959 -58351923 + AT_rich Low_complexity Low_complexity 1 24 0 2393 119 0 0 chr20 13802208 13802520 -58351362 - AluSx SINE Alu 0 312 1 235 281 0 0 chr20 13804777 13804834 -58349048 + (TG)n Simple_repeat Simple_repeat 2 58 0 2245 257 77 26 chr20 13804991 13805947 -58347935 - L2 LINE L2 -5 3308 2299 184 309 32 21 chr20 13806106 13806200 -58347682 + MIR SINE MIR 51 145 -117 789 250 53 13 chr20 13806200 13806428 -58347454 - LTR16A1 LTR ERVL 0 457 221 1675 193 0 7 chr20 13807221 13807522 -58346360 + AluJb SINE Alu 1 299 -13 180 169 119 51 chr20 13807787 13807846 -58346036 + MIR SINE MIR 103 165 -97 1294 220 7 17 chr20 13808104 13808400 -58345482 + LTR51 LTR ERV1 225 517 -154 3497 169 15 7 chr20 13808451 13809065 -58344817 + LTR31 LTR ERV1 1 619 0 210 300 0 0 chr20 13809228 13809278 -58344604 + MIR SINE MIR 172 221 -41 1886 146 33 3 chr20 13809311 13809640 -58344242 - MER2 DNA MER2_type 0 345 7 3424 210 91 6 chr20 13809654 13810431 -58343451 + MER21B LTR ERV1 20 862 -1 651 186 105 0 chr20 13810655 13810779 -58343103 - FAM SINE Alu -21 164 28 239 325 38 0 chr20 13810792 13810872 -58343010 - MIR SINE MIR -73 189 107 2923 177 19 14 chr20 13810988 13811580 -58342302 - LTR49 LTR ERV1 0 595 1 982 282 95 52 chr20 13812304 13812819 -58341063 + MLT1H LTR MaLR 13 549 0 2432 50 0 0 chr20 13813042 13813368 -58340514 - AluY SINE Alu 0 326 1 465 235 110 71 chr20 13813671 13813926 -58339956 - LTR16A1 LTR ERVL -190 267 3 3166 150 51 33 chr20 13813986 13814593 -58339289 + LTR35 LTR ERV1 1 618 0 460 360 32 62 chr20 13814631 13815000 -58338882 + L2 LINE L2 2911 3268 -4 352 242 54 72 chr20 13815489 13815712 -58338170 - L1ME3A LINE L1 -4 6166 5948 818 165 45 5 chr20 13815765 13815965 -58337917 - L1MA7 LINE L1 -2 6289 6082 297 0 0 0 chr20 13816153 13816186 -58337696 + (TG)n Simple_repeat Simple_repeat 2 34 0 279 0 0 0 chr20 13816326 13816357 -58337525 + (TG)n Simple_repeat Simple_repeat 1 31 0 188 307 88 35 chr20 13816816 13816930 -58336952 - L2 LINE L2 -8 3264 3145 1184 203 44 70 chr20 13817618 13818017 -58335865 - MLT1B LTR MaLR -2 465 1 240 167 0 0 chr20 13818285 13818333 -58335549 + CT-rich Low_complexity Low_complexity 3 50 0 487 324 94 9 chr20 13818844 13819057 -58334825 + MIR SINE MIR 30 260 -2 2625 186 20 15 chr20 13819329 13819866 -58334016 - MER67A LTR ERV1 0 543 4 195 250 0 0 chr20 13821078 13821126 -58332756 - MIR SINE MIR -30 232 185 2079 247 53 93 chr20 13821282 13822612 -58331270 + L1M4 LINE L1 168 1444 -5098 3173 152 11 32 chr20 13822612 13822919 -58330963 + L1MB7 LINE L1 5570 5882 -302 2185 93 0 0 chr20 13822919 13823199 -58330683 + AluY SINE Alu 1 280 -31 185 0 40 0 chr20 13823203 13823228 -58330654 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 3173 152 11 32 chr20 13823228 13823534 -58330348 + L1MB7 LINE L1 5885 6175 -9 217 254 237 0 chr20 13823540 13823654 -58330228 + MIR SINE MIR 97 237 -25 2103 107 0 4 chr20 13824257 13824538 -58329344 + AluSg SINE Alu 1 280 -30 274 151 0 19 chr20 13825482 13825535 -58328347 - Charlie5 DNA MER1_type -33 2579 2528 2651 223 72 42 chr20 13825544 13825608 -58328274 - L1ME1 LINE L1 -18 6082 6021 1242 231 101 42 chr20 13825608 13826085 -58327797 - MLT1D LTR MaLR 0 505 1 2651 223 72 42 chr20 13826085 13827122 -58326760 - L1ME1 LINE L1 -79 6021 4960 2256 240 83 96 chr20 13827116 13828268 -58325614 - L1ME1 LINE L1 -2281 3799 2634 * 2200 130 40 8 chr20 13828268 13828621 -58325261 - THE1B LTR MaLR 0 364 1 2256 240 83 96 chr20 13828621 13828771 -58325111 - L1ME1 LINE L1 -3446 2634 2514 2065 132 27 128 chr20 13828771 13829247 -58324635 + MSTA LTR MaLR 1 428 0 2256 240 83 96 chr20 13829247 13829366 -58324516 - L1ME1 LINE L1 -3566 2514 2395 614 266 70 56 chr20 13829370 13829855 -58324027 - L1ME1 LINE L1 -5196 874 383 402 342 88 9 chr20 13829859 13830087 -58323795 - L1ME1 LINE L1 -5595 475 230 1182 156 33 5 chr20 13830718 13830929 -58322953 + MSTB LTR MaLR 210 426 0 620 72 0 0 chr20 13831137 13831220 -58322662 - AluY SINE Alu -235 83 1 2163 140 0 0 chr20 13831612 13831920 -58321962 - AluSx SINE Alu -4 308 1 723 260 20 10 chr20 13832276 13832480 -58321402 - LTR16C LTR ERVL -47 444 239 2528 66 0 0 chr20 13833645 13833947 -58319935 - AluY SINE Alu -9 302 1 208 258 16 0 chr20 13834176 13834238 -58319644 + (TATATG)n Simple_repeat Simple_repeat 4 66 0 305 192 0 50 chr20 13834570 13834669 -58319213 + L2 LINE L2 3102 3195 -118 1778 134 20 51 chr20 13834670 13834713 -58319169 - MER1B DNA MER1_type -2373 339 296 3096 143 68 45 chr20 13834713 13835333 -58318549 - MER51A LTR ERV1 0 634 1 1778 134 20 51 chr20 13835333 13835639 -58318243 - MER1B DNA MER1_type -2416 296 1 874 273 112 44 chr20 13835675 13835707 -58318175 + LTR16C LTR ERVL 6 34 -457 1942 173 57 37 chr20 13835707 13836165 -58317717 + MLT1C LTR MaLR 1 467 0 874 273 112 44 chr20 13836165 13836587 -58317295 + LTR16C LTR ERVL 34 491 0 259 261 65 0 chr20 13836587 13836679 -58317203 + L2 LINE L2 3216 3313 0 310 257 138 0 chr20 13837362 13837471 -58316411 - MIR SINE MIR -29 233 110 456 266 46 39 chr20 13837703 13837950 -58315932 + MLT1G1 LTR MaLR 1 284 -306 402 248 102 15 chr20 13838078 13838215 -58315667 + MLT1G1 LTR MaLR 447 595 0 354 367 14 14 chr20 13839052 13839199 -58314683 + L2 LINE L2 2825 2971 -343 411 21 0 0 chr20 13839208 13839256 -58314626 + (TC)n Simple_repeat Simple_repeat 2 49 0 801 291 183 12 chr20 13839341 13839750 -58314132 - LTR16C LTR ERVL -8 483 5 194 267 0 0 chr20 13839834 13839879 -58314003 - L2 LINE L2 -226 3046 3002 3419 217 19 22 chr20 13840156 13840985 -58312897 + L1MD2 LINE L1 5319 6145 -214 688 42 21 0 chr20 13841050 13841146 -58312736 + (TAGA)n Simple_repeat Simple_repeat 2 99 0 383 147 0 0 chr20 13841146 13841214 -58312668 - 7SK RNA RNA -5 188 121 756 153 21 14 chr20 13841233 13841377 -58312505 - 7SK RNA RNA -48 145 1 565 14 27 0 chr20 13841377 13841451 -58312431 + (TAGA)n Simple_repeat Simple_repeat 2 77 0 358 232 9 36 chr20 13841457 13841569 -58312313 + L1MD3 LINE L1 7878 7986 -9 244 266 0 32 chr20 13841791 13841885 -58311997 - L1ME3A LINE L1 -174 5996 5906 1610 173 3 33 chr20 13843860 13844160 -58309722 + AluJo SINE Alu 1 291 -21 369 0 0 0 chr20 13844175 13844216 -58309666 + (CA)n Simple_repeat Simple_repeat 2 42 0 360 0 0 0 chr20 13844365 13844405 -58309477 + (TG)n Simple_repeat Simple_repeat 2 41 0 1578 130 22 77 chr20 13845692 13846079 -58307803 + MER67C LTR ERV1 6 403 -243 271 253 13 0 chr20 13846141 13846216 -58307666 + MER67D LTR ERV1 433 508 -6 258 151 40 32 chr20 13846420 13846546 -58307336 + (TATAA)n Simple_repeat Simple_repeat 5 131 0 326 294 19 12 chr20 13846649 13846658 -58307224 + (TATATG)n Simple_repeat Simple_repeat 1 8 -153 3116 196 23 23 chr20 13846658 13847171 -58306711 + MER82 DNA MER2_type 1 516 -137 2333 52 3 3 chr20 13847171 13847459 -58306423 - AluY SINE Alu -23 288 1 3116 196 23 23 chr20 13847459 13847598 -58306284 + MER82 DNA MER2_type 515 653 0 326 294 19 12 chr20 13847598 13847748 -58306134 + (TATATG)n Simple_repeat Simple_repeat 8 161 0 245 29 29 0 chr20 13847748 13847782 -58306100 + (GA)n Simple_repeat Simple_repeat 1 35 0 347 169 15 0 chr20 13847847 13847912 -58305970 + Charlie4 DNA MER1_type 1871 1936 -25 1082 214 75 57 chr20 13848581 13848697 -58305185 + L1MC4 LINE L1 7577 7689 -353 2013 123 26 15 chr20 13848697 13849039 -58304843 + L1PA16 LINE L1 5812 6157 -9 1082 214 75 57 chr20 13849039 13849246 -58304636 + L1MC4 LINE L1 7689 7913 -129 324 0 0 0 chr20 13849246 13849282 -58304600 + (TG)n Simple_repeat Simple_repeat 2 37 0 1082 214 75 57 chr20 13849282 13849410 -58304472 + L1MC4 LINE L1 7913 8037 -5 264 137 0 0 chr20 13849632 13849683 -58304199 + (TC)n Simple_repeat Simple_repeat 2 52 0 542 193 100 157 chr20 13849697 13849927 -58303955 - MLT1G LTR MaLR -283 312 105 2007 177 37 0 chr20 13849927 13850277 -58303605 + MLT1A1 LTR MaLR 2 364 -1 542 193 100 157 chr20 13850277 13850377 -58303505 - MLT1G LTR MaLR -490 105 1 316 286 23 15 chr20 13850668 13850801 -58303081 - LTR16C LTR ERVL 0 491 358 1426 209 55 16 chr20 13851184 13851533 -58302349 - MER63B DNA MER1_type -661 401 34 180 0 0 0 chr20 13851533 13851553 -58302329 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 1426 209 55 16 chr20 13851553 13851586 -58302296 - MER63B DNA MER1_type -1028 34 4 252 128 43 0 chr20 13852947 13852994 -58300888 + MLT1I LTR MaLR 98 146 -263 793 274 84 29 chr20 13853048 13853358 -58300524 + MLT1H LTR MaLR 15 341 -208 484 295 35 0 chr20 13853547 13853720 -58300162 + MLT1I LTR MaLR 231 409 0 21 0 0 0 chr20 13853908 13853929 -58299953 + AT_rich Low_complexity Low_complexity 1 21 0 936 184 18 0 chr20 13853929 13854092 -58299790 - FAM SINE Alu -9 166 1 2231 239 21 35 chr20 13854798 13854970 -58298912 + L1ME3A LINE L1 5521 5694 -476 1436 225 18 11 chr20 13854970 13855254 -58298628 - AluJo SINE Alu -22 290 5 2231 239 21 35 chr20 13855254 13855737 -58298145 + L1ME3A LINE L1 5694 6167 -3 188 298 18 0 chr20 13855901 13855958 -58297924 + L2 LINE L2 3255 3312 -1 432 0 0 0 chr20 13855959 13856007 -58297875 + (TGGA)n Simple_repeat Simple_repeat 2 49 0 335 344 16 8 chr20 13856013 13856135 -58297747 + L2 LINE L2 3134 3256 -16 932 80 17 11 chr20 13856152 13856195 -58297687 + (GGGAA)n Simple_repeat Simple_repeat 1 219 0 932 80 17 11 chr20 13856195 13856370 -58297512 + (GGGAA)n Simple_repeat Simple_repeat 5 180 0 2247 184 63 31 chr20 13856713 13857255 -58296627 + MER34B LTR ERV1 7 565 0 343 305 105 23 chr20 13857314 13857458 -58296424 - MIR SINE MIR -65 143 32 305 319 138 7 chr20 13857598 13857736 -58296146 - MIR SINE MIR -104 158 3 689 263 22 0 chr20 13857766 13857945 -58295937 - MER5A DNA MER1_type -3 186 4 253 254 16 0 chr20 13857946 13858009 -58295873 - MIR SINE MIR -71 191 128 184 264 113 0 chr20 13858074 13858127 -58295755 - MIR SINE MIR -93 115 57 1736 113 0 42 chr20 13859303 13859568 -58294314 + AluSx SINE Alu 1 254 -58 1480 78 0 0 chr20 13859685 13859865 -58294017 - AluY SINE Alu -131 180 1 1367 183 11 0 chr20 13859887 13860172 -58293710 - L1MB7 LINE L1 -327 5857 5570 532 221 57 0 chr20 13860168 13860326 -58293556 - L1M4 LINE L1 -5094 1448 1282 * 720 130 0 9 chr20 13860338 13860475 -58293407 + AluY SINE Alu 194 311 0 2148 114 6 25 chr20 13861248 13861565 -58292317 + AluSx SINE Alu 1 311 -1 236 292 0 0 chr20 13861636 13861684 -58292198 - MIR SINE MIR -211 51 4 313 179 0 0 chr20 13861714 13861770 -58292112 - MER5A DNA MER1_type -2 187 132 584 291 19 5 chr20 13862275 13862485 -58291397 + LTR16A1 LTR ERVL 245 457 0 2163 98 21 0 chr20 13862762 13863048 -58290834 - AluSc SINE Alu -17 292 1 228 372 22 15 chr20 13863125 13863262 -58290620 + L2 LINE L2 2922 3059 -213 996 213 76 57 chr20 13863266 13863776 -58290106 - MLT1E2 LTR MaLR -2 503 3 636 208 89 42 chr20 13863889 13863912 -58289970 - MIR SINE MIR -27 235 215 198 0 0 0 chr20 13863912 13863934 -58289948 + (TA)n Simple_repeat Simple_repeat 1 22 0 2745 68 5 8 chr20 13863934 13864303 -58289579 - L1PA6 LINE L1 -19 6135 5768 636 208 89 42 chr20 13864303 13864446 -58289436 - MIR SINE MIR -46 216 60 521 276 109 42 chr20 13864465 13864867 -58289015 + MLT1J2 LTR MaLR 21 449 -1 213 284 11 0 chr20 13865936 13866024 -58287858 + (TA)n Simple_repeat Simple_repeat 1 89 0 307 332 69 57 chr20 13866068 13866417 -58287465 + L2 LINE L2 2216 2568 -746 308 117 0 33 chr20 13866531 13866591 -58287291 + (GAAA)n Simple_repeat Simple_repeat 3 60 0 190 388 31 0 chr20 13866645 13866774 -58287108 - L2 LINE L2 -176 3137 3005 833 293 85 64 chr20 13866867 13867419 -58286463 - L2 LINE L2 -321 2992 2431 291 274 83 24 chr20 13867594 13867762 -58286120 - LTR33A LTR ERVL -3 520 343 311 280 11 0 chr20 13868279 13868372 -58285510 - MLT1H LTR MaLR -337 212 119 951 224 224 18 chr20 13868575 13868906 -58284976 - MLT1H LTR MaLR -71 478 80 714 238 9 101 chr20 13868918 13869263 -58284619 + MLT1H LTR MaLR 171 547 -2 2136 145 3 0 chr20 13869396 13869707 -58284175 - AluSx SINE Alu 0 312 1 485 293 21 14 chr20 13869831 13869971 -58283911 + MIR SINE MIR 13 153 -109 720 231 121 10 chr20 13870235 13870434 -58283448 + MER58A DNA MER1_type 1 221 -3 766 247 11 16 chr20 13870452 13870634 -58283248 - MER5A DNA MER1_type -8 181 1 208 211 39 0 chr20 13871800 13871852 -58282030 + CT-rich Low_complexity Low_complexity 2 55 0 783 157 24 0 chr20 13871864 13871899 -58281983 + CT-rich Low_complexity Low_complexity 3 36 -136 2081 170 15 50 chr20 13871899 13872375 -58281507 + MER65C LTR ERV1 1 459 -2 783 157 24 0 chr20 13872375 13872505 -58281377 + CT-rich Low_complexity Low_complexity 36 172 0 1550 163 108 18 chr20 13872655 13872987 -58280895 + MLT1A1 LTR MaLR 1 362 -3 440 212 12 0 chr20 13873105 13873190 -58280692 + LTR16C LTR ERVL 406 491 0 286 273 36 0 chr20 13873686 13873796 -58280086 + L1MEd LINE L1 45 158 -5961 1235 202 4 4 chr20 13874241 13874469 -58279413 + AluJo SINE Alu 64 291 -21 228 211 0 0 chr20 13874479 13874531 -58279351 - MLT1J2 LTR MaLR -33 417 366 737 239 135 90 chr20 13874675 13875235 -58278647 + MLT1H LTR MaLR 1 553 -2 735 178 25 31 chr20 13875259 13875422 -58278460 - MLT1J2 LTR MaLR -272 178 17 526 314 56 13 chr20 13875657 13876049 -58277833 + L1M4 LINE L1 3425 3833 -2313 227 188 43 0 chr20 13876054 13876123 -58277759 + (TA)n Simple_repeat Simple_repeat 1 72 0 7673 166 97 30 chr20 13876160 13876554 -58277328 + L1MCa LINE L1 24 390 -6036 1967 83 9 98 chr20 13876554 13876711 -58277171 + AluSx SINE Alu 1 117 -195 2384 47 0 0 chr20 13876711 13877014 -58276868 + AluY SINE Alu 6 308 0 1967 83 9 98 chr20 13877014 13877180 -58276702 + AluSx SINE Alu 117 296 -16 7673 166 97 30 chr20 13877180 13878490 -58275392 + L1MCa LINE L1 390 1854 -4572 2219 100 0 3 chr20 13878490 13878808 -58275074 + AluSx SINE Alu 1 312 0 7673 166 97 30 chr20 13878808 13878882 -58275000 + L1MCa LINE L1 1854 1922 -4504 233 0 62 0 chr20 13879035 13879067 -58274815 + (GAAA)n Simple_repeat Simple_repeat 2 35 0 463 316 76 0 chr20 13879110 13879360 -58274522 + L1M4 LINE L1 4069 4337 -1809 606 224 7 22 chr20 13879436 13879643 -58274239 - L1M4 LINE L1 -1520 4626 4420 287 65 22 0 chr20 13879794 13879840 -58274042 + (CA)n Simple_repeat Simple_repeat 2 48 0 1018 71 0 0 chr20 13879978 13880104 -58273778 - AluY SINE Alu -13 298 173 527 307 42 0 chr20 13880137 13880326 -58273556 + MIR SINE MIR 4 200 -62 255 217 0 0 chr20 13880475 13880535 -58273347 + (TTCA)n Simple_repeat Simple_repeat 2 61 0 399 284 155 7 chr20 13880649 13880744 -58273138 + L1ME3A LINE L1 5619 5699 -471 444 19 0 0 chr20 13880744 13880797 -58273085 + (CA)n Simple_repeat Simple_repeat 2 54 0 399 284 155 7 chr20 13880797 13880979 -58272903 + L1ME3A LINE L1 5699 5937 -233 29 0 0 0 chr20 13881331 13881360 -58272522 + AT_rich Low_complexity Low_complexity 1 29 0 2321 217 68 21 chr20 13881603 13882217 -58271665 - MER82 DNA MER2_type -10 643 1 654 331 98 11 chr20 13882382 13882750 -58271132 + L2 LINE L2 692 1091 -2223 439 358 78 20 chr20 13882723 13883067 -58270815 + L2 LINE L2 2926 3289 -24 * 22 0 0 0 chr20 13883465 13883487 -58270395 + AT_rich Low_complexity Low_complexity 1 22 0 233 360 54 0 chr20 13884026 13884137 -58269745 + L2 LINE L2 3197 3313 0 533 328 88 65 chr20 13884137 13885024 -58268858 + L2 LINE L2 1449 2355 -959 1318 205 18 76 chr20 13885139 13885519 -58268363 + MLT1A1 LTR MaLR 8 365 0 2377 244 52 40 chr20 13885520 13886249 -58267633 - MER21B LTR ERV1 -107 756 19 283 185 37 0 chr20 13886287 13886341 -58267541 - MER21B LTR ERV1 -796 67 12 701 290 142 60 chr20 13886678 13887155 -58266727 + L2 LINE L2 1328 1851 -1463 2097 147 7 3 chr20 13887155 13887455 -58266427 + AluSx SINE Alu 1 301 -11 701 290 142 60 chr20 13887455 13887490 -58266392 + L2 LINE L2 1851 1882 -1432 997 283 26 10 chr20 13887493 13887800 -58266082 - L2 LINE L2 -1190 2124 1813 1794 242 129 10 chr20 13887806 13888301 -58265581 - MER68 LTR ERV1 -8 554 1 393 270 123 56 chr20 13888301 13888553 -58265329 - L2 LINE L2 -1493 1821 1553 2450 77 0 0 chr20 13888568 13888878 -58265004 + AluY SINE Alu 1 310 -1 24 53 0 0 chr20 13889447 13889485 -58264397 + AT_rich Low_complexity Low_complexity 1 38 0 3999 185 41 11 chr20 13889618 13890395 -58263487 + Tigger6a DNA MER2_type 4 811 -786 2154 130 3 0 chr20 13890395 13890696 -58263186 - AluSx SINE Alu -10 302 1 3999 185 41 11 chr20 13890696 13890768 -58263114 + Tigger6a DNA MER2_type 811 879 -204 1529 162 8 113 chr20 13890774 13891163 -58262719 + MER7A DNA MER2_type 1 346 0 241 309 0 0 chr20 13891214 13891269 -58262613 + Tigger6a DNA MER2_type 1027 1081 -2 308 121 35 0 chr20 13891282 13891340 -58262542 + CT-rich Low_complexity Low_complexity 4 63 0 237 259 45 94 chr20 13891616 13891817 -58262065 - L1ME LINE L1 -474 5647 5457 2267 155 75 20 chr20 13891866 13892694 -58261188 + MER21A LTR ERV1 1 931 0 430 299 122 9 chr20 13893275 13893489 -58260393 + MER102a DNA MER1_type 68 305 -25 538 174 0 32 chr20 13894292 13894447 -58259435 + CT-rich Low_complexity Low_complexity 3 152 0 1067 280 98 17 chr20 13894491 13894962 -58258920 - MER20B DNA MER1_type -274 509 1 648 280 69 18 chr20 13894962 13895180 -58258702 + L2 LINE L2 802 1030 -2284 837 298 23 12 chr20 13895257 13895584 -58258298 + LTR16A1 LTR ERVL 151 457 0 187 284 0 95 chr20 13896124 13896219 -58257663 + L2 LINE L2 3181 3266 -6 279 345 98 51 chr20 13896523 13896912 -58256970 + L2 LINE L2 2814 3220 -52 305 82 20 0 chr20 13897008 13897057 -58256825 + (TTCA)n Simple_repeat Simple_repeat 3 52 0 219 103 0 0 chr20 13897222 13897261 -58256621 + (TAA)n Simple_repeat Simple_repeat 3 41 0 457 273 23 0 chr20 13897727 13897859 -58256023 + MLT1H LTR MaLR 392 526 -23 2203 248 44 19 chr20 13898893 13899639 -58254243 + L1ME3A LINE L1 5406 6167 -3 233 288 9 54 chr20 13899708 13899819 -58254063 + MIR SINE MIR 92 197 -65 2123 43 86 7 chr20 13900567 13900847 -58253035 - AluY SINE Alu -9 302 1 624 210 59 27 chr20 13900863 13901049 -58252833 - MER20 DNA MER1_type 0 219 28 250 349 16 69 chr20 13901522 13901711 -58252171 + LTR16C LTR ERVL 71 249 -242 537 246 175 12 chr20 13901711 13901951 -58251931 + LTR16C LTR ERVL 204 482 -9 245 219 37 49 chr20 13903065 13903147 -58250735 + MLT1H LTR MaLR 63 143 -412 475 118 0 75 chr20 13903160 13903253 -58250629 - MLT1H LTR MaLR -246 303 218 341 231 15 0 chr20 13903232 13903297 -58250585 + MLT1H LTR MaLR 285 350 -199 * 1440 134 88 69 chr20 13904221 13904527 -58249355 + AluJb SINE Alu 1 312 0 453 264 16 25 chr20 13904813 13904934 -58248948 + MER5B DNA MER1_type 2 121 -57 696 115 0 0 chr20 13904942 13905038 -58248844 + AluSp/q SINE Alu 196 291 -22 319 149 0 0 chr20 13905040 13905087 -58248795 + MER5B DNA MER1_type 129 175 -3 1082 170 68 4 chr20 13905095 13905344 -58248538 + MER33 DNA MER1_type 1 256 -68 5154 53 5 9 chr20 13905429 13906084 -58247798 - L1PA7 LINE L1 -4 6150 5499 348 222 153 0 chr20 13906229 13906373 -58247509 - Charlie1 DNA MER1_type 0 2761 2596 * 3803 165 42 9 chr20 13906372 13907166 -58246716 - Charlie1 DNA MER1_type -353 2408 1589 180 0 0 0 chr20 13907742 13907762 -58246120 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 2292 113 3 0 chr20 13907950 13908261 -58245621 - AluSx SINE Alu 0 312 1 327 89 30 0 chr20 14010641 14010709 -58143173 + Alu SINE Alu 1 48 -254 242 208 52 78 chr20 14011848 14011925 -58141957 + MIR3 SINE MIR 108 182 -26 2259 89 3 3 chr20 14012070 14012372 -58141510 + AluSx SINE Alu 1 302 -10 1313 77 0 56 chr20 14012375 14012571 -58141311 + AluSg/x SINE Alu 128 312 0 246 284 14 0 chr20 14016989 14017063 -58136819 - MER34B LTR ERV1 -3 562 488 240 280 56 9 chr20 14017359 14017466 -58136416 - MER34B LTR ERV1 -443 122 11 380 225 0 0 chr20 14017482 14017562 -58136320 - LTR49 LTR ERV1 0 595 516 2274 99 0 0 chr20 14017679 14017981 -58135901 - AluSx SINE Alu -10 302 1 494 246 66 66 chr20 14018066 14018294 -58135588 - LTR48B LTR ERV1 -390 232 5 486 260 0 0 chr20 14020270 14020661 -58133221 + (CA)n Simple_repeat Simple_repeat 1 391 0 202 53 0 53 chr20 14126069 14126107 -58027775 + (AGGGGG)n Simple_repeat Simple_repeat 6 41 0 2186 83 3 10 chr20 14126437 14126737 -58027145 + AluSg1 SINE Alu 4 301 -8 452 194 29 0 chr20 14126849 14126952 -58026930 + LTR37A LTR ERV1 52 157 -269 604 255 68 116 chr20 14126957 14127089 -58026793 + MLT1C LTR MaLR 1 138 -329 2368 100 0 0 chr20 14127089 14127399 -58026483 - AluSq SINE Alu -1 312 3 604 255 68 116 chr20 14127399 14127740 -58026142 + MLT1C LTR MaLR 138 451 -16 476 211 28 21 chr20 14127884 14128026 -58025856 + LTR37A LTR ERV1 284 426 0 277 260 0 0 chr20 14129154 14129227 -58024655 + MER20 DNA MER1_type 1 73 -146 787 245 126 47 chr20 14131303 14131621 -58022261 - MER2 DNA MER2_type 0 344 2 818 167 8 0 chr20 14131629 14131761 -58022121 - FLAM_A SINE Alu 0 133 1 546 179 11 6 chr20 14132097 14132276 -58021606 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 786 148 0 7 chr20 14132310 14132575 -58021307 + (TGGA)n Simple_repeat Simple_repeat 1 263 0 629 146 6 17 chr20 14132588 14132766 -58021116 + (TGGA)n Simple_repeat Simple_repeat 2 177 0 330 191 30 32 chr20 14133005 14133280 -58020602 + (TGAG)n Simple_repeat Simple_repeat 1 274 0 557 138 0 87 chr20 14133308 14133503 -58020379 + (TGAA)n Simple_repeat Simple_repeat 1 178 0 520 135 22 65 chr20 14133550 14133735 -58020147 + (TGAA)n Simple_repeat Simple_repeat 1 177 0 21 0 0 0 chr20 14133860 14133881 -58020001 + AT_rich Low_complexity Low_complexity 1 21 0 2195 92 0 0 chr20 14134294 14134597 -58019285 + AluSx SINE Alu 1 303 0 4196 116 14 33 chr20 14135201 14135447 -58018435 + MER41B LTR ERV1 1 250 -385 2303 60 0 17 chr20 14135447 14135745 -58018137 - AluY SINE Alu -18 293 1 1454 92 0 14 chr20 14135745 14135952 -58017930 - AluSg/x SINE Alu -12 298 95 4196 116 14 33 chr20 14135952 14136080 -58017802 + MER41B LTR ERV1 249 378 -257 1932 160 3 6 chr20 14136080 14136392 -58017490 + AluSx SINE Alu 1 311 -1 4196 116 14 33 chr20 14136392 14136660 -58017222 + MER41B LTR ERV1 378 633 -2 375 294 15 22 chr20 14136680 14136816 -58017066 - MER4D LTR ERV1 0 903 769 2829 202 13 50 chr20 14136931 14137088 -58016794 - MER4D LTR ERV1 -110 793 632 2275 94 0 0 chr20 14137088 14137386 -58016496 - AluSx SINE Alu -9 303 6 2829 202 13 50 chr20 14137386 14137907 -58015975 - MER4D LTR ERV1 -271 632 140 291 194 14 125 chr20 14137915 14137999 -58015883 - LTR38B LTR ERV1 0 610 547 2560 52 0 0 chr20 14137999 14138309 -58015573 + AluY SINE Alu 2 311 0 291 194 14 125 chr20 14138309 14138368 -58015514 - LTR38B LTR ERV1 -63 547 483 3667 145 55 3 chr20 14138488 14139164 -58014718 + MER50 LTR ERV1 1 711 -23 382 244 8 42 chr20 14139516 14139635 -58014247 - LTR38B LTR ERV1 -495 115 1 379 193 37 0 chr20 14139635 14139752 -58014130 - MER49 LTR ERV1 -770 133 1 558 108 0 0 chr20 14141089 14141172 -58012710 + (GGA)n Simple_repeat Simple_repeat 1 83 0 1536 84 25 199 chr20 14142114 14142471 -58011411 - AluSq SINE Alu -8 295 1 1994 121 28 0 chr20 14142953 14143242 -58010640 - AluSx SINE Alu -15 297 1 2493 61 3 0 chr20 14143252 14143562 -58010320 - AluY SINE Alu 0 311 1 1866 163 0 3 chr20 14143564 14143880 -58010002 - AluJo SINE Alu -18 294 1 1334 166 0 14 chr20 14144022 14144245 -58009637 - AluJb SINE Alu -7 305 86 23 0 0 0 chr20 14144247 14144270 -58009612 + AT_rich Low_complexity Low_complexity 1 23 0 2243 96 0 10 chr20 14145038 14145207 -58008675 - AluSg SINE Alu -10 300 134 2257 101 7 0 chr20 14145207 14145513 -58008369 - AluSp SINE Alu -5 308 1 2243 96 0 10 chr20 14145513 14145646 -58008236 - AluSg SINE Alu -176 134 1 195 100 0 0 chr20 14145689 14145719 -58008163 + (A)n Simple_repeat Simple_repeat 1 30 0 1924 122 49 0 chr20 14145746 14146034 -58007848 + AluSx SINE Alu 1 302 -10 354 346 6 0 chr20 14146870 14147099 -58006783 + G-rich Low_complexity Low_complexity 1 230 0 217 349 0 0 chr20 14147528 14147614 -58006268 - MIR3 SINE MIR -16 192 107 402 234 76 38 chr20 14147847 14148031 -58005851 - MER20 DNA MER1_type 0 219 29 2356 57 3 13 chr20 14152194 14152493 -58001389 - AluY SINE Alu -15 296 1 2349 82 0 7 chr20 14153064 14153367 -58000515 - AluY SINE Alu -10 301 1 2284 93 13 0 chr20 14153395 14153696 -58000186 + AluSp SINE Alu 1 305 -8 395 222 139 20 chr20 14153696 14153726 -58000156 - L1MB5 LINE L1 -11 6169 6144 1527 193 34 14 chr20 14153726 14154022 -57999860 - AluJo SINE Alu -10 302 1 395 222 139 20 chr20 14154022 14154041 -57999841 - L1MB5 LINE L1 -36 6144 6129 1999 135 7 0 chr20 14154041 14154344 -57999538 - AluSx SINE Alu -7 305 1 395 222 139 20 chr20 14154344 14154475 -57999407 - L1MB5 LINE L1 -51 6129 5990 1172 161 16 0 chr20 14154680 14154873 -57999009 + AluJo SINE Alu 5 200 -112 1090 295 61 14 chr20 14154889 14155333 -57998549 - L1MB5 LINE L1 -197 5977 5513 348 248 206 21 chr20 14155458 14155599 -57998283 - MER5B DNA MER1_type -4 174 8 372 299 48 0 chr20 14155802 14155949 -57997933 + MER45A DNA AcHobo 1 154 -24 1878 122 32 0 chr20 14157357 14157636 -57996246 + AluJo SINE Alu 5 292 -20 2320 80 13 0 chr20 14157642 14157941 -57995941 + AluSg SINE Alu 1 303 -7 2070 113 0 3 chr20 14159030 14159323 -57994559 - AluSx SINE Alu -19 293 2 180 0 0 0 chr20 14160184 14160204 -57993678 + (A)n Simple_repeat Simple_repeat 1 20 0 199 321 27 9 chr20 14160902 14161014 -57992868 + L2 LINE L2 2563 2676 -638 212 240 16 50 chr20 14161877 14161998 -57991884 + C-rich Low_complexity Low_complexity 3 119 0 23 33 0 0 chr20 14162328 14162358 -57991524 + GC_rich Low_complexity Low_complexity 1 30 0 208 143 0 0 chr20 14162774 14162809 -57991073 + (TGAA)n Simple_repeat Simple_repeat 2 36 0 246 305 110 0 chr20 14164619 14164701 -57989181 + MIR SINE MIR 51 141 -121 1826 228 23 13 chr20 14265198 14265668 -57888214 + MER65B-int LTR ERV1 4397 4871 0 424 143 0 204 chr20 14265668 14265737 -57888145 + MER65B LTR ERV1 1 26 -505 1834 116 15 0 chr20 14265737 14265996 -57887886 + AluSg SINE Alu 1 263 -47 424 143 0 204 chr20 14265996 14266073 -57887809 + MER65B LTR ERV1 26 117 -414 2606 167 50 2 chr20 14266073 14266588 -57887294 - LTR9B LTR ERV1 0 644 105 2407 81 0 0 chr20 14266628 14266935 -57886947 - AluSq SINE Alu -5 308 2 1364 209 54 0 chr20 14266966 14267282 -57886600 + MER65A LTR ERV1 113 445 0 439 304 112 47 chr20 14267282 14267376 -57886506 + HAL1 LINE L1 2083 2169 -338 1959 133 3 3 chr20 14267376 14267669 -57886213 + AluSx SINE Alu 1 293 -19 2561 55 0 3 chr20 14267673 14267985 -57885897 + AluY SINE Alu 1 311 0 439 304 112 47 chr20 14267985 14268099 -57885783 + HAL1 LINE L1 2171 2310 -197 705 200 36 0 chr20 14269833 14269998 -57883884 - MER20 DNA MER1_type -46 173 3 932 204 164 13 chr20 14271707 14272025 -57881857 - MLT1D LTR MaLR -5 500 135 1709 159 3 21 chr20 14272132 14272421 -57881461 - AluJb SINE Alu -28 284 1 584 204 80 0 chr20 14272425 14272586 -57881296 + Charlie2 DNA MER1_type 2607 2780 -82 950 209 45 126 chr20 14272586 14272907 -57880975 + MER89 LTR ERV1 3 270 -289 2104 118 0 7 chr20 14272907 14273211 -57880671 - AluSx SINE Alu -10 302 1 950 209 45 126 chr20 14273211 14273397 -57880485 + MER89 LTR ERV1 270 469 -90 1804 151 79 19 chr20 14273990 14274308 -57879574 - MER1B DNA MER1_type 0 337 1 953 108 0 0 chr20 14274496 14274644 -57879238 + L1P LINE L1 1768 1915 -4231 879 277 69 0 chr20 14275428 14275746 -57878136 + L1 LINE L1 4930 5269 -877 2035 140 17 0 chr20 14275748 14276048 -57877834 - AluSx SINE Alu -7 305 1 847 137 0 30 chr20 14276059 14276190 -57877692 - FLAM_C SINE Alu -16 127 1 2162 111 0 13 chr20 14276200 14276498 -57877384 - AluSx SINE Alu -18 294 1 1271 151 120 4 chr20 14276614 14276871 -57877011 - AluJb SINE Alu 0 316 34 257 349 106 23 chr20 14277701 14277924 -57875958 + L1M4 LINE L1 3414 3617 -2529 2156 105 3 0 chr20 14277924 14278218 -57875664 + AluSp SINE Alu 1 295 -18 257 349 106 23 chr20 14278218 14278381 -57875501 + L1M4 LINE L1 3617 3832 -2314 2384 80 0 0 chr20 14278424 14278725 -57875157 + AluSx SINE Alu 6 306 -6 197 326 146 0 chr20 14279636 14279725 -57874157 - MIR SINE MIR -75 187 86 210 274 16 70 chr20 14281290 14281476 -57872406 + (AGATG)n Simple_repeat Simple_repeat 2 177 0 236 238 30 67 chr20 14281939 14282103 -57871779 + (AGATG)n Simple_repeat Simple_repeat 2 159 0 294 228 44 50 chr20 14282136 14282316 -57871566 + (AGATG)n Simple_repeat Simple_repeat 2 180 0 349 297 116 62 chr20 14283825 14284084 -57869798 + HAL1b LINE L1 537 809 -539 223 143 0 0 chr20 14284988 14285023 -57868859 - MIR SINE MIR -115 147 113 406 281 65 0 chr20 14285457 14285602 -57868280 + MER63 DNA MER1_type 27 1657 -31 1927 130 14 7 chr20 14285816 14286109 -57867773 - AluSx SINE Alu -17 295 1 519 230 72 29 chr20 14286112 14286251 -57867631 - MLT1G1 LTR MaLR -7 588 439 21 0 0 0 chr20 14286641 14286662 -57867220 + AT_rich Low_complexity Low_complexity 1 21 0 603 241 110 62 chr20 14287478 14287863 -57866019 + MLT1E2 LTR MaLR 63 435 -158 1863 267 65 18 chr20 14287916 14288533 -57865349 - L1MB5 LINE L1 0 6174 5529 201 204 0 47 chr20 14288745 14288874 -57865008 + (CCCCAG)n Simple_repeat Simple_repeat 1 122 0 419 258 210 36 chr20 14289177 14289506 -57864376 + MLT1C LTR MaLR 51 436 -31 2142 129 7 0 chr20 14290113 14290422 -57863460 + AluSx SINE Alu 1 311 -1 429 81 0 0 chr20 14290434 14290496 -57863386 + (GGAA)n Simple_repeat Simple_repeat 3 64 0 267 243 27 0 chr20 14291030 14291104 -57862778 + Ricksha DNA DNA 8 83 -1963 978 180 69 69 chr20 14291114 14291308 -57862574 + Ricksha DNA DNA 2925 3122 -132 2286 69 7 0 chr20 14291308 14291619 -57862263 - AluY SINE Alu 0 313 1 978 180 69 69 chr20 14291619 14291728 -57862154 + Ricksha DNA DNA 3121 3229 -25 861 141 0 22 chr20 14292089 14292224 -57861658 + FLAM_C SINE Alu 1 132 -1 216 369 15 15 chr20 14292825 14292955 -57860927 + MIR SINE MIR 7 136 -126 3911 132 29 19 chr20 14293357 14293986 -57859896 + MER41B LTR ERV1 1 635 0 208 231 19 0 chr20 14294531 14294583 -57859299 - L2 LINE L2 -5 3267 3215 192 246 159 44 chr20 14294698 14294909 -57858973 - L2 LINE L2 -312 3001 2766 679 221 39 11 chr20 14296070 14296251 -57857631 + L1M3 LINE L1 5431 5616 -555 1297 209 4 0 chr20 14296251 14296505 -57857377 + AluJo SINE Alu 1 255 -57 2254 102 0 0 chr20 14297043 14297348 -57856534 + AluSx SINE Alu 1 305 -7 261 179 15 30 chr20 14298251 14298318 -57855564 + L1M3 LINE L1 5587 5652 -531 397 338 20 0 chr20 14300771 14300919 -57852963 + MER5B DNA MER1_type 10 160 -18 226 323 52 0 chr20 14301171 14301267 -57852615 - MLT1D LTR MaLR 0 505 405 271 260 0 52 chr20 14301400 14301477 -57852405 - MLT1D LTR MaLR -349 156 84 238 277 54 1 chr20 14302839 14303030 -57850852 - MER31B LTR ERV1 0 466 243 2429 87 0 0 chr20 14303770 14304082 -57849800 + AluSq SINE Alu 1 312 -1 303 108 0 124 chr20 14305464 14305650 -57848232 + (CAGGG)n Simple_repeat Simple_repeat 3 165 0 318 110 16 110 chr20 14305722 14305913 -57847969 + (CAGGG)n Simple_repeat Simple_repeat 3 175 0 194 202 258 0 chr20 14306931 14307020 -57846862 - MIR3 SINE MIR -50 158 47 235 150 33 33 chr20 14307232 14307292 -57846590 + L1MB3 LINE L1 6124 6183 0 2037 124 13 3 chr20 14307301 14307424 -57846458 + AluSq SINE Alu 1 121 -192 306 0 0 0 chr20 14307424 14307458 -57846424 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 2037 124 13 3 chr20 14307458 14307641 -57846241 + AluSq SINE Alu 121 310 -3 189 0 0 0 chr20 14307888 14307909 -57845973 + (CA)n Simple_repeat Simple_repeat 2 22 0 741 272 120 0 chr20 14307918 14308260 -57845622 + MLT1B LTR MaLR 2 384 -6 557 231 69 107 chr20 14309168 14309514 -57844368 + MLT1B LTR MaLR 6 338 -52 368 351 7 13 chr20 14310706 14310860 -57843022 + (CACG)n Simple_repeat Simple_repeat 2 154 0 198 302 0 63 chr20 14310928 14310991 -57842891 - MIR SINE MIR -105 103 45 1429 234 80 12 chr20 14311811 14312222 -57841660 + L1MB3 LINE L1 5444 5882 -301 227 203 78 16 chr20 14312234 14312298 -57841584 - MLT1H LTR MaLR -42 507 440 2305 195 130 33 chr20 14312839 14313250 -57840632 + L1MC1 LINE L1 1399 1769 -4627 1630 176 69 0 chr20 14313250 14313540 -57840342 - AluJo SINE Alu -2 310 1 2305 195 130 33 chr20 14313540 14313694 -57840188 + L1MC1 LINE L1 1769 1907 -4489 1739 140 72 0 chr20 14313694 14313973 -57839909 + AluJo SINE Alu 5 303 -9 2305 195 130 33 chr20 14313973 14314348 -57839534 + L1MC1 LINE L1 1907 2387 -4009 1856 119 18 0 chr20 14314348 14314655 -57839227 + AluSx SINE Alu 1 312 0 2305 195 130 33 chr20 14314655 14314801 -57839081 + L1MC1 LINE L1 2387 2517 -3879 389 226 128 0 chr20 14314807 14314909 -57838973 - L1M4 LINE L1 -1628 4518 4404 892 264 78 0 chr20 14315579 14315912 -57837970 + L1MC1 LINE L1 4807 5165 -1050 706 173 0 0 chr20 14315920 14316030 -57837852 + FLAM_C SINE Alu 3 112 -31 186 43 0 0 chr20 14316030 14316053 -57837829 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 4794 177 38 26 chr20 14316071 14317278 -57836604 + L1MC1 LINE L1 5180 6401 -1 186 330 85 51 chr20 14317496 14317790 -57836092 - L2 LINE L2 -100 3172 2869 378 204 0 87 chr20 14318189 14318431 -57835451 + G-rich Low_complexity Low_complexity 1 221 0 240 116 23 0 chr20 14323221 14323264 -57830618 + MLT1G1 LTR MaLR 545 588 -7 1765 114 70 0 chr20 14323791 14324063 -57829819 + AluSq SINE Alu 1 291 -22 674 182 147 0 chr20 14326096 14326294 -57827588 + MER21A LTR ERV1 38 264 -667 1099 200 154 0 chr20 14326300 14326605 -57827277 + MER21A LTR ERV1 580 931 0 560 236 32 24 chr20 14428040 14428481 -57725401 - BSR/Beta Satellite Satellite -280 444 1 328 354 26 5 chr20 14428530 14428746 -57725136 - BSR/Beta Satellite Satellite -100 220 1 693 248 19 51 chr20 14428852 14431115 -57722767 - BSR/Beta Satellite Satellite -16 2189 1 1228 277 32 13 chr20 14431236 14432492 -57721390 - BSR/Beta Satellite Satellite -2 1881 273 2083 138 0 0 chr20 14432492 14432804 -57721078 + AluSx SINE Alu 1 312 0 1228 277 32 13 chr20 14432804 14433083 -57720799 - BSR/Beta Satellite Satellite -1610 273 1 752 231 5 22 chr20 14433097 14433893 -57719989 - BSR/Beta Satellite Satellite -49 782 1 1798 258 11 23 chr20 14433950 14435248 -57718634 - BSR/Beta Satellite Satellite -1 1820 195 1854 142 82 23 chr20 14435248 14435600 -57718282 - THE1C LTR MaLR 0 375 3 1798 258 11 23 chr20 14435600 14435793 -57718089 - BSR/Beta Satellite Satellite -1626 195 1 269 245 57 28 chr20 14435903 14436009 -57717873 - BSR/Beta Satellite Satellite -30 122 14 716 224 4 48 chr20 14436032 14436928 -57716954 - BSR/Beta Satellite Satellite -22 856 1 498 213 0 60 chr20 14436963 14437169 -57716713 - BSR/Beta Satellite Satellite -1 193 1 264 308 66 17 chr20 14437276 14437443 -57716439 - BSR/Beta Satellite Satellite -15 175 1 337 174 42 21 chr20 14437582 14437726 -57716156 + CT-rich Low_complexity Low_complexity 2 148 0 578 142 47 27 chr20 14437867 14438201 -57715681 + CT-rich Low_complexity Low_complexity 1 340 0 219 114 0 68 chr20 14438203 14438247 -57715635 + (TCTCC)n Simple_repeat Simple_repeat 4 44 0 424 205 29 38 chr20 14438252 14439009 -57714873 + CT-rich Low_complexity Low_complexity 1 750 0 1058 193 83 9 chr20 14439163 14439422 -57714460 - AluJb SINE Alu 0 316 41 5926 44 2 0 chr20 14440699 14441773 -57712109 - L1PA4 LINE L1 -416 5739 4665 3358 51 2 0 chr20 14441773 14442185 -57711697 + L1PA4 LINE L1 5740 6152 -3 2164 64 13 24 chr20 14442873 14443171 -57710711 + AluY SINE Alu 1 295 -16 235 224 12 118 chr20 14443560 14443645 -57710237 - L2 LINE L2 0 3272 3197 1601 160 4 0 chr20 14443666 14443916 -57709966 + AluSx SINE Alu 1 251 -61 2883 163 66 10 chr20 14443951 14444448 -57709434 + MER1A DNA MER1_type 3 527 0 185 161 0 0 chr20 14445079 14445110 -57708772 + MIR SINE MIR 159 189 -73 369 263 0 0 chr20 14445226 14445302 -57708580 + MER20 DNA MER1_type 84 159 -60 2007 102 0 36 chr20 14445752 14446056 -57707826 + AluSq SINE Alu 4 296 -17 1858 86 23 154 chr20 14446684 14447080 -57706802 + LTR14B LTR ERVK 1 608 0 5824 73 17 8 chr20 14447080 14447856 -57706026 + HERVK14 LTR ERVK 1 783 -5162 8240 103 26 6 chr20 14447894 14449063 -57704819 + HERV17 LTR ERV1 824 2016 -6610 * 9733 81 33 15 chr20 14449046 14450473 -57703409 + HERV17 LTR ERV1 2430 5553 -3073 367 41 0 0 chr20 14450472 14450521 -57703361 + HERV17 LTR ERV1 433 481 -8145 * 3300 71 28 7 chr20 14450521 14451165 -57702717 + HERVK14 LTR ERVK 5038 5764 -181 319 179 0 18 chr20 14451166 14451222 -57702660 + MER41C LTR ERV1 7 61 -493 700 60 45 135 chr20 14451222 14451355 -57702527 + HERVK14 LTR ERVK 5822 5942 -3 231 67 67 44 chr20 14451360 14451405 -57702477 + LTR14B LTR ERVK 1 46 -562 * 1889 112 140 25 chr20 14451393 14451750 -57702132 + LTR14B LTR ERVK 211 608 0 192 261 15 46 chr20 14451799 14451864 -57702018 - L2 LINE L2 -216 3056 2994 187 333 30 15 chr20 14452654 14452720 -57701162 - L3 LINE CR1 -98 1479 1413 1419 109 0 0 chr20 14454480 14454673 -57699209 + MER9 LTR ERVK 1 193 -318 1938 134 10 10 chr20 14456490 14456780 -57697102 - AluSq SINE Alu -19 294 5 784 168 0 42 chr20 14457039 14457182 -57696700 + FLAM_C SINE Alu 7 143 0 882 116 8 0 chr20 14457353 14457474 -57696408 + AluSp SINE Alu 1 122 -191 2114 119 17 3 chr20 14457654 14457956 -57695926 - AluSq SINE Alu -7 306 1 236 291 93 35 chr20 14458060 14458232 -57695650 + Charlie8 DNA MER1_type 7 188 -2229 203 286 124 38 chr20 14458522 14458627 -57695255 + MIR SINE MIR 30 143 -65 1940 140 39 0 chr20 14458776 14459061 -57694821 - AluSx SINE Alu -16 296 1 2150 130 22 3 chr20 14459566 14459882 -57694000 + MER9 LTR ERVK 190 511 0 271 306 56 35 chr20 14460393 14460537 -57693345 - MIR SINE MIR -8 254 108 2256 81 30 7 chr20 14461514 14461812 -57692070 + AluY SINE Alu 1 305 -6 360 266 79 62 chr20 14463189 14463325 -57690557 + L1ME LINE L1 5293 5435 -2373 1747 144 61 0 chr20 14463325 14463639 -57690243 + AluSg SINE Alu 3 332 0 360 266 79 62 chr20 14463639 14463678 -57690204 + L1ME LINE L1 5435 5472 -2336 2042 134 0 0 chr20 14463836 14464127 -57689755 + AluY SINE Alu 2 292 -19 908 225 32 46 chr20 14464184 14464468 -57689414 - LTR9 LTR ERV1 0 612 333 21357 70 0 3 chr20 14464471 14467192 -57686690 + L1P LINE L1 2 2716 -3430 1035 17 0 0 chr20 14467292 14467410 -57686472 + L1P LINE L1 2708 2825 -3321 29 0 0 0 chr20 14517632 14517661 -57636221 + AT_rich Low_complexity Low_complexity 1 29 0 2128 103 14 0 chr20 14517661 14517942 -57635940 - AluSg SINE Alu -25 285 1 2073 130 10 0 chr20 14517944 14518236 -57635646 - AluSx SINE Alu -17 295 1 926 234 19 5 chr20 14518246 14518451 -57635431 - MIR SINE MIR -13 249 42 362 61 0 0 chr20 14518551 14518600 -57635282 - Alu SINE Alu -247 54 6 1020 140 34 34 chr20 14518623 14518802 -57635080 + AluJo SINE Alu 1 179 -133 815 201 22 16 chr20 14519107 14519291 -57634591 + MER20 DNA MER1_type 1 185 -34 2274 96 0 13 chr20 14519296 14519597 -57634285 + AluSq SINE Alu 3 299 -14 202 231 0 15 chr20 14520498 14520563 -57633319 + (TA)n Simple_repeat Simple_repeat 2 65 0 226 258 38 13 chr20 14521347 14521427 -57632455 - AluJ/monomer SINE Alu -252 56 2 292 239 77 43 chr20 14523072 14523189 -57630693 + L1ME LINE L1 5504 5624 -497 29 28 0 0 chr20 14523306 14523342 -57630540 + AT_rich Low_complexity Low_complexity 1 36 0 915 262 75 43 chr20 14523352 14523726 -57630156 - L2 LINE L2 0 3313 2928 2110 208 17 17 chr20 14524004 14524637 -57629245 - L1MC/D LINE L1 -642 5691 5057 649 287 64 64 chr20 14525494 14526038 -57627844 + L1PA14 LINE L1 5289 5832 -329 * 2114 230 83 10 chr20 14525613 14526212 -57627670 + L1ME2 LINE L1 5391 6033 -131 302 312 21 28 chr20 14526475 14526616 -57627266 - L1MC/D LINE L1 -2301 3845 3706 30 69 0 0 chr20 14526788 14526846 -57627036 + AT_rich Low_complexity Low_complexity 1 58 0 24 32 0 0 chr20 14527502 14527533 -57626349 + GC_rich Low_complexity Low_complexity 1 31 0 206 105 26 0 chr20 14527827 14527865 -57626017 + (TA)n Simple_repeat Simple_repeat 2 40 0 3077 160 9 15 chr20 14528285 14528809 -57625073 - Tigger3(Golem) DNA MER2_type 0 3029 2509 2074 132 25 3 chr20 14528809 14529135 -57624747 - L1PA7 LINE L1 -5 6149 5817 783 231 12 0 chr20 14530026 14530186 -57623696 - MLT1E2 LTR MaLR 0 626 465 1331 130 9 9 chr20 14530188 14530443 -57623439 + L1M2 LINE L1 5219 5473 -743 2017 103 4 7 chr20 14530455 14530736 -57623146 + AluSq SINE Alu 1 280 -33 234 116 0 0 chr20 14530740 14530783 -57623099 + (TTAA)n Simple_repeat Simple_repeat 1 43 0 286 214 40 113 chr20 14531100 14531217 -57622665 + MER5B DNA MER1_type 66 161 -17 2258 112 7 0 chr20 14531220 14531525 -57622357 + AluSx SINE Alu 1 307 -5 222 278 0 42 chr20 14532041 14532113 -57621769 + GA-rich Low_complexity Low_complexity 4 72 0 414 113 42 0 chr20 14533527 14533598 -57620284 - L1MA3 LINE L1 0 6305 6232 960 245 86 8 chr20 14533851 14534222 -57619660 - L1M4 LINE L1 -886 6071 5672 991 183 0 6 chr20 14534222 14534397 -57619485 + AluJb SINE Alu 122 295 -17 1061 259 31 13 chr20 14534422 14534851 -57619031 - L1MEc LINE L1 -3668 3289 2897 5000 85 15 0 chr20 14535138 14535797 -57618085 - L1PA4 LINE L1 -74 6081 5413 201 268 40 101 chr20 14535838 14536022 -57617860 - L2 LINE L2 -919 2395 2222 3227 173 72 7 chr20 14536022 14536590 -57617292 - MER6A DNA MER2_type 0 605 1 201 268 40 101 chr20 14536590 14536603 -57617279 - L2 LINE L2 -1092 2222 2210 416 125 0 62 chr20 14536710 14536822 -57617060 - MER96B DNA MER1_type? -234 183 79 354 164 20 13 chr20 14536817 14536888 -57616994 - AluJ/FLAM SINE Alu -245 57 2 * 353 357 80 30 chr20 14537258 14537622 -57616260 - HERV16 LTR ERVL -1907 3089 2708 746 174 7 43 chr20 14537677 14537815 -57616067 + FLAM_C SINE Alu 1 133 0 344 290 65 0 chr20 14537951 14538058 -57615824 - L1MEc LINE L1 -6543 316 203 397 289 35 35 chr20 14538834 14539007 -57614875 + MER20B DNA MER1_type 2 174 -609 189 0 0 0 chr20 14539141 14539162 -57614720 + (TG)n Simple_repeat Simple_repeat 2 22 0 * 441 0 0 0 chr20 14539161 14539210 -57614672 + (TA)n Simple_repeat Simple_repeat 2 50 0 256 204 0 0 chr20 14539827 14539881 -57614001 + FAM SINE Alu 125 178 -1 765 283 107 4 chr20 14541409 14541681 -57612201 - L1MC4a LINE L1 -1933 5875 5576 1718 130 4 8 chr20 14542175 14542429 -57611453 - AluSx SINE Alu -59 253 1 2254 96 7 0 chr20 14542675 14542968 -57610914 - AluSx SINE Alu -17 295 1 974 168 12 6 chr20 14542970 14543131 -57610751 - FRAM SINE Alu -4 162 1 465 19 0 0 chr20 14543780 14543834 -57610048 + (CA)n Simple_repeat Simple_repeat 2 55 0 416 275 191 8 chr20 14543893 14544024 -57609858 + MER91A DNA MER1_type 4 158 -38 2882 196 21 19 chr20 14544672 14545692 -57608190 - L1 LINE L1 -3325 4240 3217 341 121 143 33 chr20 14545986 14546077 -57607805 + AluJb SINE Alu 34 134 -168 1871 161 0 7 chr20 14546081 14546373 -57607509 + AluJo SINE Alu 1 290 -22 1937 99 4 0 chr20 14546720 14546973 -57606909 + AluSp SINE Alu 1 254 -59 341 238 12 94 chr20 14547120 14547280 -57606602 - MLT1B LTR MaLR -81 309 163 1340 124 16 5 chr20 14547280 14547474 -57606408 + AluSx SINE Alu 1 196 -116 590 84 0 48 chr20 14547474 14547557 -57606325 + AluSq/x SINE Alu 63 141 -172 2373 103 0 0 chr20 14547751 14548063 -57605819 - AluSq SINE Alu -1 312 1 1970 311 64 39 chr20 14550105 14550963 -57602919 - MER45C DNA AcHobo -65 888 9 12828 45 1 8 chr20 14552433 14554094 -57599788 - L1P LINE L1 -2456 3690 2042 1985 177 10 65 chr20 14554183 14554596 -57599286 + MLT1B LTR MaLR 1 390 0 206 324 29 19 chr20 14554675 14554780 -57599102 + L2 LINE L2 3193 3298 -15 12614 97 7 2 chr20 14555002 14556794 -57597088 + L1PA3 LINE L1 614 2414 -3732 459 115 85 46 chr20 14557047 14557177 -57596705 - ALR/Alpha Satellite centromeric 0 172 38 5150 65 33 17 chr20 14557182 14558428 -57595454 + L1PA3 LINE L1 4748 6015 -140 253 214 26 82 chr20 14558795 14558951 -57594931 - MIR SINE MIR -52 156 5 915 86 0 79 chr20 14558981 14559121 -57594761 + AluSq/x SINE Alu 12 140 -173 239 189 113 0 chr20 14559134 14559187 -57594695 + MIR3 SINE MIR 118 176 -32 1556 87 29 0 chr20 14559345 14559577 -57594305 + AluSg/x SINE Alu 72 309 0 191 313 36 12 chr20 14560757 14560840 -57593042 - MIR SINE MIR -75 133 49 2054 104 13 25 chr20 14561048 14561364 -57592518 - AluSx SINE Alu 0 312 1 627 146 24 57 chr20 14561388 14561511 -57592371 - FLAM_C SINE Alu -16 127 9 2517 221 29 85 chr20 14561693 14562423 -57591459 - L1MCa LINE L1 -5715 711 23 1083 183 32 44 chr20 14562492 14562860 -57591022 - MLT2A2 LTR ERVL 0 453 178 8396 47 1 0 chr20 14563112 14564141 -57589741 + L1P LINE L1 4369 5398 -748 508 109 48 30 chr20 14564339 14564504 -57589378 + (TAGA)n Simple_repeat Simple_repeat 2 169 0 201 204 20 0 chr20 14564521 14564570 -57589312 + (TAGA)n Simple_repeat Simple_repeat 1 50 0 1592 124 104 4 chr20 14565093 14565352 -57588530 - AluJo SINE Alu -25 287 3 2203 123 0 3 chr20 14565911 14566220 -57587662 + AluSx SINE Alu 2 309 -3 1166 122 6 0 chr20 14566386 14566550 -57587332 - AluJb SINE Alu -13 299 135 312 258 245 12 chr20 14566553 14566716 -57587166 + MIR SINE MIR 36 236 -26 187 259 74 56 chr20 14566791 14566899 -57586983 - L2 LINE L2 -35 3278 3169 2575 37 0 3 chr20 14567866 14568164 -57585718 - AluY SINE Alu -14 297 1 310 221 158 11 chr20 14568923 14569018 -57584864 - MIR SINE MIR -109 153 45 8252 63 3 0 chr20 14569274 14570321 -57583561 - L1P LINE L1 -3425 2721 1672 408 179 0 0 chr20 14571064 14571131 -57582751 - MLT1A1 LTR MaLR -3 362 296 843 119 0 0 chr20 14571131 14571240 -57582642 + AluSq/x SINE Alu 9 117 -196 1032 118 34 92 chr20 14571242 14571338 -57582544 - MLT1A1 LTR MaLR -148 217 117 972 115 0 0 chr20 14571338 14571460 -57582422 - FLAM_C SINE Alu -11 122 1 1032 118 34 92 chr20 14571460 14571616 -57582266 - MLT1A1 LTR MaLR -248 117 1 233 343 0 56 chr20 14572024 14572202 -57581680 - L3 LINE CR1 -28 1549 1382 191 229 297 8 chr20 14572659 14572777 -57581105 + L2 LINE L2 1985 2136 -1178 185 340 25 25 chr20 14572810 14572969 -57580913 + L2 LINE L2 2413 2571 -743 5811 150 44 16 chr20 14573070 14574096 -57579786 + MER11C LTR ERVK 3 1057 -14 846 193 0 0 chr20 14574115 14574276 -57579606 - ALR/Alpha Satellite centromeric -4 168 8 2081 127 3 0 chr20 14574689 14575027 -57578855 + AluSq SINE Alu 1 339 0 563 0 0 15 chr20 14575380 14575448 -57578434 + (GAAA)n Simple_repeat Simple_repeat 2 68 0 1690 155 48 7 chr20 14575540 14575831 -57578051 + AluSq SINE Alu 1 303 -10 1913 119 31 0 chr20 14576397 14576683 -57577199 - AluSx SINE Alu -17 295 1 1030 221 54 0 chr20 14576691 14576913 -57576969 - MIR SINE MIR -21 241 8 536 221 97 15 chr20 14576928 14577123 -57576759 + MIR SINE MIR 17 227 -35 4934 112 6 1 chr20 14577305 14578003 -57575879 - L1P LINE L1 -5437 709 9 1165 144 6 2 chr20 14578006 14580012 -57573870 + ALR/Alpha Satellite centromeric 1 2012 -1 1187 151 5 5 chr20 14580023 14589057 -57564825 + ALR/Alpha Satellite centromeric 1 9033 -60 23252 53 7 0 chr20 14589157 14592092 -57561790 + L1PA4 LINE L1 1209 4161 -1985 6204 48 1 6 chr20 14592092 14592813 -57561069 + L1PA4 LINE L1 5436 6155 0 1067 178 7 2 chr20 14592813 14594615 -57559267 + ALR/Alpha Satellite centromeric 1 1809 -31 1134 160 7 5 chr20 14594715 14596666 -57557216 + ALR/Alpha Satellite centromeric 1 1954 -7 962 183 5 1 chr20 14596681 14597240 -57556642 + ALR/Alpha Satellite centromeric 1 561 -32 935 174 10 2 chr20 14597281 14597774 -57556108 + ALR/Alpha Satellite centromeric 1 496 -56 1089 178 5 2 chr20 14597890 14599255 -57554627 + ALR/Alpha Satellite centromeric 1 1368 -27 1116 172 8 1 chr20 14599423 14601825 -57552057 + ALR/Alpha Satellite centromeric 1 2417 -4 4777 62 13 0 chr20 14601925 14602653 -57551229 - L1P2 LINE L1 -677 5478 4744 1083 171 9 2 chr20 14602654 14603801 -57550081 + ALR/Alpha Satellite centromeric 1 1155 -6 3165 133 30 8 chr20 14603907 14604576 -57549306 - MER11B LTR ERVK -458 778 1 5225 76 11 0 chr20 14604578 14605305 -57548577 - HERVK11 LTR ERVK -2 7951 7217 1461 101 23 5 chr20 14605297 14605516 -57548366 - HERVK11 LTR ERVK -7524 429 207 * 1839 165 0 6 chr20 14605513 14605835 -57548047 - HERVK11 LTR ERVK -7633 320 1 5712 153 30 17 chr20 14605835 14606892 -57546990 - MER11C LTR ERVK 0 1071 1 840 190 27 0 chr20 14606902 14607166 -57546716 + ALR/Alpha Satellite centromeric 1 271 -71 2220 89 0 3 chr20 14707327 14707632 -57446250 - AluSg1 SINE Alu 0 304 1 1249 227 163 62 chr20 14708225 14708723 -57445159 + MLT1H LTR MaLR 2 549 0 390 279 76 44 chr20 14708728 14708886 -57444996 - MER5B DNA MER1_type -11 167 5 497 283 35 0 chr20 14709418 14709563 -57444319 + LTR16A1 LTR ERVL 4 153 -304 6577 136 70 10 chr20 14709566 14710711 -57443171 - Tigger3b DNA MER2_type 0 1231 1 781 247 124 25 chr20 14710711 14710994 -57442888 + LTR16A1 LTR ERVL 145 455 -2 1059 124 0 0 chr20 14712426 14712603 -57441279 + (GGGGA)n Simple_repeat Simple_repeat 3 179 0 597 158 0 0 chr20 14712606 14712726 -57441156 + G-rich Low_complexity Low_complexity 3 122 0 1462 189 0 63 chr20 14712766 14713084 -57440798 + AluJb SINE Alu 1 298 -14 2101 167 182 55 chr20 14714099 14714238 -57439644 + LTR49 LTR ERV1 1 121 -474 2109 129 3 0 chr20 14714238 14714532 -57439350 + AluSx SINE Alu 1 295 -17 2101 167 182 55 chr20 14714532 14714920 -57438962 + LTR49 LTR ERV1 121 595 0 6326 93 29 8 chr20 14715223 14716252 -57437630 + L1PA13 LINE L1 5106 6163 0 26 50 0 0 chr20 14716252 14716292 -57437590 + AT_rich Low_complexity Low_complexity 1 40 0 632 253 67 6 chr20 14716365 14716543 -57437339 + MER5A DNA MER1_type 1 189 0 21 0 0 0 chr20 14716823 14716844 -57437038 + AT_rich Low_complexity Low_complexity 1 21 0 2280 94 0 7 chr20 14717704 14718012 -57435870 - AluSx SINE Alu -6 306 1 541 272 17 13 chr20 14718236 14718416 -57435466 + MIR SINE MIR 35 214 -48 1526 196 34 7 chr20 14718440 14718731 -57435151 + AluJb SINE Alu 4 302 -10 266 336 29 10 chr20 14718855 14718959 -57434923 + MIR3 SINE MIR 91 196 -12 280 223 26 4 chr20 14719135 14719220 -57434662 - L1ME3A LINE L1 -47 6115 6026 1535 200 40 7 chr20 14719323 14719445 -57434437 + AluJb SINE Alu 1 117 -195 252 0 0 0 chr20 14719445 14719473 -57434409 + (TAA)n Simple_repeat Simple_repeat 2 29 0 1535 200 40 7 chr20 14719473 14719650 -57434232 + AluJb SINE Alu 117 310 -2 22 0 0 0 chr20 14720780 14720802 -57433080 + AT_rich Low_complexity Low_complexity 1 22 0 2120 124 3 13 chr20 14721176 14721491 -57432391 + AluSx SINE Alu 1 312 0 2242 110 7 0 chr20 14722406 14722705 -57431177 - AluSc SINE Alu -8 301 1 420 181 165 16 chr20 14722730 14722857 -57431025 + MER5A DNA MER1_type 7 152 -37 543 223 172 6 chr20 14723353 14723510 -57430372 + MER5A DNA MER1_type 4 186 -3 387 269 187 8 chr20 14723523 14723657 -57430225 - MER5B DNA MER1_type -2 176 19 1545 178 68 105 chr20 14723808 14724218 -57429664 - MSTD LTR MaLR 0 396 2 204 328 95 26 chr20 14724220 14724336 -57429546 - MIR SINE MIR -118 144 21 502 249 54 60 chr20 14724808 14724993 -57428889 + MIR SINE MIR 40 223 -39 546 281 27 14 chr20 14725195 14725341 -57428541 + L2 LINE L2 3124 3271 -1 742 272 163 0 chr20 14725489 14725765 -57428117 + MLT1L LTR MaLR 294 614 -1 304 301 112 0 chr20 14725904 14726047 -57427835 - MIR SINE MIR -58 204 46 829 243 11 11 chr20 14729301 14729490 -57424392 + MER5A DNA MER1_type 1 189 0 250 279 77 10 chr20 14729496 14729600 -57424282 + MIR SINE MIR 23 133 -75 470 244 127 141 chr20 14729600 14729967 -57423915 - MLT1H1 LTR MaLR 0 555 195 1232 162 209 50 chr20 14729967 14730226 -57423656 - AluJo SINE Alu -2 300 1 470 244 127 141 chr20 14730226 14730353 -57423529 - MLT1H1 LTR MaLR -360 195 68 298 267 40 0 chr20 14730405 14730480 -57423402 + MIR3 SINE MIR 129 206 -2 246 105 0 0 chr20 14730725 14730763 -57423119 + (ATG)n Simple_repeat Simple_repeat 2 39 0 207 0 0 0 chr20 14730948 14730971 -57422911 + (T)n Simple_repeat Simple_repeat 1 23 0 2393 92 0 0 chr20 14731014 14731317 -57422565 - AluSg SINE Alu -7 303 1 529 290 90 28 chr20 14731357 14731612 -57422270 + MLT1J2 LTR MaLR 180 450 0 250 278 67 0 chr20 14731798 14731888 -57421994 - L2 LINE L2 0 3272 3177 805 85 25 0 chr20 14731994 14732112 -57421770 + BC200 scRNA scRNA 36 156 -44 284 323 46 39 chr20 14732114 14732244 -57421638 - L2 LINE L2 -222 3050 2920 209 184 0 41 chr20 14733027 14733076 -57420806 + (CATATA)n Simple_repeat Simple_repeat 2 48 0 244 297 98 108 chr20 14733089 14733361 -57420521 - L2 LINE L2 -660 2654 2381 2164 130 0 3 chr20 14733361 14733668 -57420214 + AluSx SINE Alu 1 306 -6 244 297 98 108 chr20 14733668 14734004 -57419878 - L2 LINE L2 -933 2381 2052 800 281 164 62 chr20 14734218 14734699 -57419183 - MLT1K LTR MaLR -14 574 45 215 276 0 0 chr20 14734976 14735004 -57418878 + A-rich Low_complexity Low_complexity 5 32 -30 2566 45 7 3 chr20 14735004 14735314 -57418568 + AluY SINE Alu 1 311 0 215 276 0 0 chr20 14735314 14735343 -57418539 + A-rich Low_complexity Low_complexity 31 62 0 189 74 0 0 chr20 14737642 14737669 -57416213 + (T)n Simple_repeat Simple_repeat 1 27 0 2088 120 0 3 chr20 14738196 14738480 -57415402 - AluSq SINE Alu -24 289 7 224 301 45 83 chr20 14739555 14739688 -57414194 - L2 LINE L2 0 3313 3186 324 0 0 0 chr20 14740272 14740308 -57413574 + (TG)n Simple_repeat Simple_repeat 2 37 0 2130 134 3 10 chr20 14742338 14742652 -57411230 - AluSx SINE Alu 0 312 1 1809 212 51 27 chr20 14743388 14743915 -57409967 + L1ME2 LINE L1 5593 6162 0 1129 290 77 5 chr20 14745293 14745672 -57408210 + LTR16C LTR ERVL 80 485 -6 231 336 8 48 chr20 14746407 14746532 -57407350 + MIR3 SINE MIR 68 187 -21 198 91 0 0 chr20 14746575 14746608 -57407274 + (A)n Simple_repeat Simple_repeat 1 33 0 2500 34 14 0 chr20 14747106 14747398 -57406484 + AluY SINE Alu 2 297 -14 21 0 0 0 chr20 14747748 14747769 -57406113 + AT_rich Low_complexity Low_complexity 1 21 0 415 188 0 0 chr20 14747769 14747838 -57406044 - Tigger5 DNA MER2_type 0 2323 2255 375 235 0 24 chr20 14747828 14747913 -57405969 + Tigger5 DNA MER2_type 2238 2320 -3 * 490 182 0 0 chr20 14747913 14747989 -57405893 - Tigger5 DNA MER2_type -2245 78 3 630 293 162 37 chr20 14748020 14748309 -57405573 - L1M4 LINE L1 -1071 5075 4824 1377 218 158 48 chr20 14748309 14748764 -57405118 + MLT1D LTR MaLR 1 505 0 630 293 162 37 chr20 14748764 14749153 -57404729 - L1M4 LINE L1 -1322 4824 4312 234 309 120 43 chr20 14749265 14750677 -57403205 - L1M4 LINE L1 -1956 4190 2671 323 279 90 49 chr20 14750949 14751193 -57402689 - L1M4 LINE L1 -3762 2384 2131 264 307 47 73 chr20 14752014 14752113 -57401769 - MIR SINE MIR -57 205 105 2345 127 19 35 chr20 14752113 14752482 -57401400 - THE1B LTR MaLR -1 363 1 12321 94 13 1 chr20 14752482 14754044 -57399838 - THE1B-int LTR MaLR 0 1580 1 1923 118 109 35 chr20 14754044 14754259 -57399623 - THE1B LTR MaLR 0 364 114 2726 45 0 0 chr20 14754259 14754569 -57399313 + AluY SINE Alu 1 310 -1 1923 118 109 35 chr20 14754569 14754692 -57399190 - THE1B LTR MaLR -250 114 1 264 307 47 73 chr20 14754692 14754740 -57399142 - MIR SINE MIR -154 108 60 783 214 32 32 chr20 14755393 14755580 -57398302 - MER5A DNA MER1_type -2 187 1 242 391 36 0 chr20 14756688 14756798 -57397084 + L2 LINE L2 3143 3256 -16 363 332 73 2 chr20 14756937 14757138 -57396744 - MIR SINE MIR -45 217 6 198 366 57 24 chr20 14757321 14757444 -57396438 - L2 LINE L2 -5 3267 3141 21 0 0 0 chr20 14757744 14757765 -57396117 + AT_rich Low_complexity Low_complexity 1 21 0 1468 218 133 3 chr20 14757959 14758344 -57395538 - MER63B DNA MER1_type 0 436 2 613 65 13 0 chr20 14758364 14758441 -57395441 + MADE1 DNA Mariner 3 80 0 830 244 19 38 chr20 14759000 14759213 -57394669 + MER3 DNA MER1_type 1 209 0 273 98 0 0 chr20 14760226 14760267 -57393615 + (T)n Simple_repeat Simple_repeat 1 41 0 1316 213 47 3 chr20 14760310 14760606 -57393276 - L1ME1 LINE L1 -5 6161 5853 254 325 12 119 chr20 14761287 14761447 -57392435 + MIR3 SINE MIR 63 205 -3 798 168 0 36 chr20 14762236 14762373 -57391509 - FLAM_A SINE Alu -1 132 1 350 148 89 59 chr20 14762572 14762673 -57391209 - MER67C LTR ERV1 0 710 607 2384 190 37 91 chr20 14762771 14763412 -57390470 - MER67C LTR ERV1 -103 607 1 411 289 37 16 chr20 14763615 14763774 -57390108 + MER5B DNA MER1_type 25 177 -1 499 349 17 0 chr20 14763815 14763987 -57389895 + MER5B DNA MER1_type 1 175 -3 2086 94 17 30 chr20 14764008 14764307 -57389575 + AluY SINE Alu 1 295 -16 192 345 108 16 chr20 14764336 14764530 -57389352 + MIR SINE MIR 51 262 0 180 0 0 0 chr20 14764765 14764785 -57389097 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 779 233 16 26 chr20 14764918 14765107 -57388775 - MER5A DNA MER1_type -2 187 1 634 201 189 13 chr20 14765962 14766121 -57387761 + MER53 DNA DNA 2 188 -1 587 221 18 61 chr20 14766488 14766651 -57387231 - MER5B DNA MER1_type -21 157 2 295 323 52 0 chr20 14766716 14766812 -57387070 - MER5A DNA MER1_type -80 109 9 270 0 0 0 chr20 14768266 14768296 -57385586 + (CA)n Simple_repeat Simple_repeat 2 31 0 311 282 161 55 chr20 14768590 14768845 -57385037 + MLT1H LTR MaLR 218 499 -50 453 348 0 18 chr20 14769733 14769897 -57383985 + MER5B DNA MER1_type 17 177 -1 197 307 53 0 chr20 14770080 14770155 -57383727 + MIR3 SINE MIR 98 176 -32 414 330 82 16 chr20 14770947 14771292 -57382590 - L1ME4a LINE L1 -204 5917 5532 1394 232 13 53 chr20 14771436 14771811 -57382071 - LTR16C LTR ERVL 0 491 132 894 231 29 25 chr20 14772077 14772319 -57381563 + L1MEc LINE L1 37 279 -6117 2135 234 79 53 chr20 14772341 14772852 -57381030 + L1MEc LINE L1 336 832 -5564 2078 130 7 3 chr20 14772852 14773159 -57380723 + AluSx SINE Alu 1 308 -4 2135 234 79 53 chr20 14773159 14773334 -57380548 + L1MEc LINE L1 832 1001 -5395 1496 163 38 55 chr20 14773334 14773799 -57380083 + AluJo SINE Alu 1 460 0 2135 234 79 53 chr20 14773799 14773892 -57379990 + L1MEc LINE L1 1001 1090 -5306 2273 101 0 25 chr20 14773892 14774208 -57379674 + AluSg SINE Alu 2 309 -1 2135 234 79 53 chr20 14774208 14774249 -57379633 + L1MEc LINE L1 1090 1180 -5216 657 205 25 59 chr20 14774243 14774488 -57379394 - L1ME4a LINE L1 -785 5361 5159 * 211 365 75 38 chr20 14774513 14774672 -57379210 - MIR SINE MIR -73 189 25 549 80 0 0 chr20 14775150 14775225 -57378657 + (CA)n Simple_repeat Simple_repeat 2 76 0 427 299 61 0 chr20 14775323 14775470 -57378412 - MIR3 SINE MIR -32 176 21 294 302 0 0 chr20 14775842 14775928 -57377954 + MIR SINE MIR 107 192 -70 2062 142 0 3 chr20 14775929 14776238 -57377644 + AluSx SINE Alu 1 308 -4 640 175 0 29 chr20 14776238 14776409 -57377473 + GA-rich Low_complexity Low_complexity 1 166 0 1720 171 0 21 chr20 14776659 14776983 -57376899 + AluJb SINE Alu 1 318 0 22 35 0 0 chr20 14779598 14779627 -57374255 + AT_rich Low_complexity Low_complexity 1 29 0 436 281 84 53 chr20 14779746 14780105 -57373777 + L1MB4 LINE L1 5629 5998 -182 * 1784 223 98 9 chr20 14779793 14780242 -57373640 + L1ME3A LINE L1 5677 6165 -5 379 288 8 8 chr20 14780262 14780394 -57373488 + L1MA10 LINE L1 6177 6308 -26 567 323 50 56 chr20 14780858 14780914 -57372968 - MLT1H LTR MaLR -197 352 297 2222 244 104 2 chr20 14780914 14781406 -57372476 + MLT1F LTR MaLR 1 542 0 567 323 50 56 chr20 14781406 14781652 -57372230 - MLT1H LTR MaLR -252 297 52 1678 207 134 47 chr20 14781653 14781756 -57372126 + MLT1F1 LTR MaLR 3 96 -471 2029 110 0 72 chr20 14781756 14782074 -57371808 - AluSc SINE Alu -14 295 1 1678 207 134 47 chr20 14782074 14782483 -57371399 + MLT1F1 LTR MaLR 96 560 -7 777 319 42 25 chr20 14782531 14783033 -57370849 - LTR67 LTR ERVL -6 551 3 422 292 22 15 chr20 14783132 14783269 -57370613 + MER117 DNA MER1_type 11 148 -49 312 301 216 7 chr20 14784123 14784276 -57369606 - MER5A DNA MER1_type 0 189 5 537 303 25 25 chr20 14784450 14784648 -57369234 - L2 LINE L2 0 3313 3116 2101 149 35 101 chr20 14786091 14786171 -57367711 - Tigger2a DNA MER2_type -2274 434 350 1804 158 3 3 chr20 14786171 14786469 -57367413 - AluJo SINE Alu -6 306 9 2101 149 35 101 chr20 14786469 14786585 -57367297 - Tigger2a DNA MER2_type -2358 350 228 194 0 39 0 chr20 14786585 14786611 -57367271 + (TA)n Simple_repeat Simple_repeat 2 28 0 2101 149 35 101 chr20 14786611 14786870 -57367012 - Tigger2a DNA MER2_type -2480 228 8 313 331 24 0 chr20 14788570 14788694 -57365188 + MER5B DNA MER1_type 4 130 -48 260 222 0 0 chr20 14788733 14788787 -57365095 + MER5B DNA MER1_type 125 178 0 * 964 268 28 24 chr20 14788787 14789035 -57364847 + MIR SINE MIR 9 257 -5 229 234 16 0 chr20 14789048 14789112 -57364770 + L2 LINE L2 2905 2969 -303 197 238 0 48 chr20 14789204 14789267 -57364615 + L2 LINE L2 3162 3221 -92 1535 177 7 11 chr20 14790266 14790543 -57363339 - AluJb SINE Alu 0 312 37 431 259 184 0 chr20 14791217 14791375 -57362507 - MER5A DNA MER1_type 0 189 3 329 302 134 7 chr20 14792450 14792599 -57361283 + MIR SINE MIR 95 262 0 192 222 44 0 chr20 14792629 14792674 -57361208 - L3 LINE CR1 -3 1574 1528 425 221 118 22 chr20 14792677 14792813 -57361069 - MER5A DNA MER1_type -1 188 40 233 259 168 46 chr20 14793167 14793298 -57360584 - L3 LINE CR1 -137 1440 1294 634 290 25 15 chr20 14793355 14793555 -57360327 + MIR SINE MIR 6 207 -55 21 36 0 0 chr20 14794009 14794037 -57359845 + AT_rich Low_complexity Low_complexity 1 28 0 1405 253 85 37 chr20 14794078 14794595 -57359287 + MLT1H LTR MaLR 6 547 -2 219 69 0 0 chr20 14794622 14794651 -57359231 + (CAA)n Simple_repeat Simple_repeat 2 30 0 315 216 27 0 chr20 14794684 14794758 -57359124 + MER116 DNA Mariner 2 77 -3 475 231 107 0 chr20 14794760 14794881 -57359001 - MIR SINE MIR -15 247 114 470 286 103 11 chr20 14795041 14795226 -57358656 - MIR SINE MIR -26 236 35 1849 155 30 82 chr20 14795447 14795814 -57358068 - MER7A DNA MER2_type 0 346 1 430 264 112 35 chr20 14796075 14796272 -57357610 - Charlie8 DNA MER1_type -2118 299 88 370 187 209 50 chr20 14796363 14796502 -57357380 + MER5A DNA MER1_type 1 161 -28 414 214 65 124 chr20 14797685 14797886 -57355996 - MLT1H LTR MaLR -2 547 359 790 256 72 9 chr20 14798083 14798306 -57355576 + LTR16A1 LTR ERVL 199 435 -22 257 262 13 31 chr20 14798415 14798647 -57355235 + CT-rich Low_complexity Low_complexity 1 227 0 221 315 109 11 chr20 14799460 14799552 -57354330 + MIR SINE MIR 25 125 -83 1892 255 69 6 chr20 14799554 14800064 -57353818 + MLT1H LTR MaLR 8 549 0 875 239 5 24 chr20 14800169 14800378 -57353504 - MER3 DNA MER1_type -4 205 1 426 325 75 16 chr20 14801153 14801341 -57352541 + MIR SINE MIR 45 243 -19 704 245 79 105 chr20 14801350 14801816 -57352066 + LTR16A1 LTR ERVL 3 456 -1 280 348 76 43 chr20 14802031 14802241 -57351641 - MER115 DNA AcHobo -260 433 217 509 284 47 0 chr20 14802242 14802390 -57351492 - MER5A DNA MER1_type -4 185 31 1316 175 98 49 chr20 14802592 14803018 -57350864 - MLT1D LTR MaLR 0 505 22 680 182 117 13 chr20 14803858 14804012 -57349870 + L1ME3A LINE L1 6000 6169 -1 1551 121 26 124 chr20 14804016 14804364 -57349518 + AluYb8 SINE Alu 1 314 -4 299 316 76 25 chr20 14804914 14805072 -57348810 + MLT1J2 LTR MaLR 284 449 -1 225 193 35 18 chr20 14805099 14805156 -57348726 - L2 LINE L2 0 3272 3215 300 321 36 15 chr20 14805222 14805359 -57348523 - MIR SINE MIR -25 237 98 272 234 36 81 chr20 14806529 14806640 -57347242 - L2 LINE L2 -1 3271 3166 208 347 80 60 chr20 14806680 14806830 -57347052 + L2 LINE L2 3159 3311 -2 331 200 31 0 chr20 14807003 14807068 -57346814 - L2 LINE L2 0 3313 3247 210 71 0 0 chr20 14807124 14807152 -57346730 + (TAAA)n Simple_repeat Simple_repeat 4 31 0 21 0 0 0 chr20 14807181 14807202 -57346680 + AT_rich Low_complexity Low_complexity 1 21 0 1364 248 54 31 chr20 14807207 14807729 -57346153 - MLT1G LTR MaLR -1 589 57 261 408 41 0 chr20 14807766 14807913 -57345969 - L2 LINE L2 -254 3059 2907 606 265 85 48 chr20 14809406 14809787 -57344095 - MLT1H LTR MaLR 0 549 118 189 277 223 0 chr20 14810119 14810231 -57343651 + MIR SINE MIR 9 145 -117 385 341 38 0 chr20 14810847 14810979 -57342903 - MER91C DNA MER1_type -3 137 1 2190 85 14 3 chr20 14811337 14811630 -57342252 + AluSq SINE Alu 1 296 -17 240 200 0 0 chr20 14811630 14811680 -57342202 + (TA)n Simple_repeat Simple_repeat 1 50 0 270 81 0 0 chr20 14812360 14812397 -57341485 + (T)n Simple_repeat Simple_repeat 1 37 0 816 132 16 0 chr20 14812398 14812527 -57341355 - L1PB1 LINE L1 -3 6148 6018 240 286 159 40 chr20 14812536 14812763 -57341119 - MLT1K LTR MaLR -2 586 333 2106 229 44 51 chr20 14812843 14813394 -57340488 + MLT1H LTR MaLR 3 549 0 2281 118 7 0 chr20 14814255 14814560 -57339322 + AluSc SINE Alu 1 307 -2 345 327 119 0 chr20 14815193 14815361 -57338521 + MLT1H LTR MaLR 130 317 -232 1861 226 61 42 chr20 14815457 14815980 -57337902 - MLT1F LTR MaLR 0 542 10 264 186 0 17 chr20 14816936 14816995 -57336887 + MLT1H LTR MaLR 492 549 0 755 287 116 68 chr20 14817676 14818143 -57335739 - L2 LINE L2 -607 2707 2219 943 251 181 25 chr20 14818147 14818617 -57335265 - MLT1G LTR MaLR -33 557 15 210 260 20 0 chr20 14818631 14818681 -57335201 + L2 LINE L2 3172 3222 -91 385 111 0 28 chr20 14818691 14818763 -57335119 - MLT2B2 LTR ERVL 0 515 446 1345 196 31 42 chr20 14818774 14819060 -57334822 + AluJo SINE Alu 12 294 -18 2632 167 13 4 chr20 14819065 14819521 -57334361 - MLT2B2 LTR ERVL -55 460 1 347 271 45 38 chr20 14819569 14819702 -57334180 - L2 LINE L2 -1100 2214 2081 931 282 41 44 chr20 14819740 14820195 -57333687 + MER115 DNA AcHobo 119 606 -87 398 228 49 0 chr20 14820194 14820317 -57333565 + Zaphod DNA AcHobo 3900 4028 -3 * 502 15 15 15 chr20 14822513 14822581 -57331301 + (TC)n Simple_repeat Simple_repeat 2 69 0 1587 206 93 35 chr20 14822633 14823064 -57330818 + MSTB2 LTR MaLR 2 457 0 1761 189 19 22 chr20 14823937 14824303 -57329579 + MLT1A1 LTR MaLR 1 365 0 925 240 48 56 chr20 14825522 14825897 -57327985 + MLT1H LTR MaLR 1 372 -177 183 279 0 0 chr20 14826811 14826854 -57327028 + MER5B DNA MER1_type 67 109 -69 729 260 62 21 chr20 14827739 14827981 -57325901 - MIR SINE MIR -5 257 6 218 353 0 0 chr20 14828713 14828798 -57325084 + L2 LINE L2 3188 3272 0 26 0 0 0 chr20 14835456 14835482 -57318400 + AT_rich Low_complexity Low_complexity 1 26 0 192 77 0 0 chr20 14839532 14839558 -57314324 + (CTG)n Simple_repeat Simple_repeat 1 26 0 241 247 169 0 chr20 14842327 14842416 -57311466 + MER5A DNA MER1_type 9 112 -77 272 272 10 68 chr20 14842881 14842984 -57310898 + MIR SINE MIR 53 149 -59 600 221 104 64 chr20 14842998 14843247 -57310635 + MER112 DNA MER1_type 2 260 0 582 14 0 0 chr20 14843303 14843376 -57310506 - L1PA3 LINE L1 -3 6152 6080 216 235 0 20 chr20 14843933 14843984 -57309898 - L2 LINE L2 -42 3230 3181 357 324 71 24 chr20 14844213 14844383 -57309499 - MIR3 SINE MIR -25 183 6 233 188 149 117 chr20 14845115 14845269 -57308613 + MIR SINE MIR 85 243 -19 1185 154 75 0 chr20 14846255 14846469 -57307413 - MER30 DNA MER1_type 0 230 1 511 240 0 40 chr20 14846713 14846863 -57307019 + MER104 DNA Tc2 37 180 0 266 26 53 0 chr20 14848134 14848172 -57305710 + (TTTTG)n Simple_repeat Simple_repeat 1 40 0 1999 105 3 83 chr20 14848647 14848972 -57304910 - AluSq SINE Alu -14 299 1 30 0 0 0 chr20 14849287 14849317 -57304565 + AT_rich Low_complexity Low_complexity 1 30 0 24 0 0 0 chr20 14849592 14849616 -57304266 + AT_rich Low_complexity Low_complexity 1 24 0 2275 113 3 0 chr20 14851374 14851683 -57302199 + AluSx SINE Alu 1 310 -2 180 0 0 0 chr20 14851861 14851881 -57302001 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 3812 165 42 9 chr20 14852457 14853251 -57300631 + Charlie1 DNA MER1_type 1589 2408 -353 317 229 153 0 chr20 14853250 14853394 -57300488 + Charlie1 DNA MER1_type 2596 2761 0 * 1903 144 152 8 chr20 14853458 14853832 -57300050 + MSTA LTR MaLR 1 428 0 2211 91 3 3 chr20 14854038 14854325 -57299557 + AluSq SINE Alu 9 295 -18 3873 156 37 9 chr20 14854882 14855619 -57298263 + Tigger2 DNA MER2_type 1 757 -1961 1062 147 59 0 chr20 14855674 14855878 -57298004 + Tigger2 DNA MER2_type 2462 2677 -41 2348 79 0 13 chr20 14856927 14857231 -57296651 + AluY SINE Alu 1 300 -11 609 162 0 18 chr20 14858258 14858369 -57295513 + L1PA8 LINE L1 6052 6160 -12 195 42 0 0 chr20 14858374 14858398 -57295484 + (GAAAA)n Simple_repeat Simple_repeat 5 28 0 28 86 0 0 chr20 14858514 14858584 -57295298 + AT_rich Low_complexity Low_complexity 1 70 0 201 270 112 22 chr20 14859064 14859153 -57294729 - MIR SINE MIR -30 232 136 2475 267 91 68 chr20 14859285 14859754 -57294128 - L2 LINE L2 0 3313 2856 2023 130 3 16 chr20 14859754 14860061 -57293821 - AluSx SINE Alu -9 303 1 2475 267 91 68 chr20 14860061 14860490 -57293392 - L2 LINE L2 -457 2856 2438 397 46 215 0 chr20 14860490 14860555 -57293327 + MADE1 DNA Mariner 2 80 0 2475 267 91 68 chr20 14860555 14860976 -57292906 - L2 LINE L2 -875 2438 1950 799 272 47 0 chr20 14861872 14862104 -57291778 + HAL1 LINE L1 3 245 -2262 236 239 82 75 chr20 14862127 14862286 -57291596 + HAL1 LINE L1 311 470 -2037 293 201 97 75 chr20 14862465 14862599 -57291283 + HAL1 LINE L1 2354 2490 -17 296 247 62 0 chr20 14863567 14863664 -57290218 + L1ME4a LINE L1 5570 5672 -449 260 268 222 13 chr20 14863765 14863918 -57289964 - MIR SINE MIR -66 196 12 336 299 126 25 chr20 14863971 14864249 -57289633 + L1ME4a LINE L1 5803 6108 -13 21 0 0 0 chr20 14864722 14864743 -57289139 + AT_rich Low_complexity Low_complexity 1 21 0 29 0 0 0 chr20 14865100 14865129 -57288753 + AT_rich Low_complexity Low_complexity 1 29 0 432 184 265 0 chr20 14865916 14866052 -57287830 - MER5B DNA MER1_type 0 178 7 505 253 111 137 chr20 14866364 14867150 -57286732 + L1M2 LINE L1 526 1349 -5500 267 288 105 33 chr20 14868260 14868413 -57285469 + MIR SINE MIR 1 164 -98 1740 184 70 3 chr20 14868415 14868758 -57285124 + MLT2D LTR ERVL 1 366 -48 219 69 0 0 chr20 14868788 14868817 -57285065 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 837 214 223 31 chr20 14868824 14869179 -57284703 + LTR54 LTR ERV1 76 510 0 375 96 0 33 chr20 14869182 14869251 -57284631 + MLT2B1 LTR ERVL 398 520 0 184 286 119 24 chr20 14869878 14869962 -57283920 - L2 LINE L2 -1 3312 3221 1582 225 29 53 chr20 14870861 14871315 -57282567 - LTR47B LTR ERVL 0 443 1 21 0 0 0 chr20 14871379 14871400 -57282482 + AT_rich Low_complexity Low_complexity 1 21 0 1855 160 40 109 chr20 14871589 14872038 -57281844 + MER47B DNA MER2_type 1 418 0 2048 117 6 25 chr20 14872372 14872688 -57281194 - AluSg SINE Alu 0 310 1 230 228 0 0 chr20 14872884 14872941 -57280941 - Charlie5 DNA MER1_type -49 2563 2507 7907 73 8 1 chr20 14872941 14874189 -57279693 + L1P3 LINE L1 4291 5547 -607 603 306 48 0 chr20 14874474 14874660 -57279222 + MIR SINE MIR 32 226 -36 511 44 0 0 chr20 14877052 14877120 -57276762 + L1PB3 LINE L1 6085 6152 -2 759 270 141 16 chr20 14877191 14877439 -57276443 + MLT1I LTR MaLR 127 405 -4 1079 230 98 18 chr20 14877493 14877828 -57276054 - MLT1I LTR MaLR -19 390 29 211 341 76 15 chr20 14877855 14877987 -57275895 - MIR SINE MIR -105 157 18 569 266 88 18 chr20 14878144 14878370 -57275512 + MIR SINE MIR 11 252 -10 233 352 0 0 chr20 14878364 14878455 -57275427 - MIR SINE MIR -10 252 162 * 25 0 0 0 chr20 14879293 14879318 -57274564 + AT_rich Low_complexity Low_complexity 1 25 0 224 222 28 14 chr20 14879840 14879855 -57274027 + (TA)n Simple_repeat Simple_repeat 1 14 -968 3794 190 48 24 chr20 14879855 14880732 -57273150 - MER54A LTR ERVL 0 901 4 224 222 28 14 chr20 14880732 14880809 -57273073 + (TA)n Simple_repeat Simple_repeat 14 982 0 1413 206 32 0 chr20 14881598 14881908 -57271974 + L1MB1 LINE L1 5848 6167 -1 2226 112 0 3 chr20 14881966 14882261 -57271621 - AluSq SINE Alu -19 294 1 1375 266 95 27 chr20 14882432 14882946 -57270936 - MLT1H LTR MaLR 0 549 1 1631 248 48 29 chr20 14882957 14883437 -57270445 + MER74B LTR ERVL 57 545 -77 295 211 191 104 chr20 14883710 14883961 -57269921 + MLT1J LTR MaLR 239 511 0 183 243 39 0 chr20 14884540 14884643 -57269239 + CT-rich Low_complexity Low_complexity 2 108 0 382 299 26 0 chr20 14884705 14884822 -57269060 - MER113 DNA MER1_type? -6 515 396 358 269 88 69 chr20 14884843 14885003 -57268879 - HAL1 LINE L1 -30 2477 2315 1472 277 87 28 chr20 14885063 14885593 -57268289 + MLT1F1 LTR MaLR 5 565 -2 300 260 71 25 chr20 14885609 14885805 -57268077 - HAL1 LINE L1 -302 2205 2001 2947 177 36 2 chr20 14885846 14886371 -57267511 + MER44D DNA MER2_type 2 599 -6 509 265 90 30 chr20 14886453 14886721 -57267161 - HAL1 LINE L1 -596 1911 1628 195 288 85 0 chr20 14886852 14886911 -57266971 + L2 LINE L2 3215 3278 -35 202 343 0 0 chr20 14887294 14887364 -57266518 + MIR3 SINE MIR 85 154 -54 1461 233 15 56 chr20 14887779 14887827 -57266055 + MLT1A2 LTR MaLR 1 49 -325 2524 140 44 0 chr20 14887827 14888235 -57265647 + MSTC LTR MaLR 3 428 0 1461 233 15 56 chr20 14888235 14888576 -57265306 + MLT1A2 LTR MaLR 49 374 0 382 349 91 0 chr20 14889026 14889235 -57264647 - MLT1H LTR MaLR -233 316 89 203 61 30 0 chr20 14889436 14889469 -57264413 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1649 153 69 0 chr20 14889489 14889751 -57264131 - AluSx SINE Alu -32 280 1 2092 164 32 57 chr20 14889890 14890360 -57263522 + MLT1C LTR MaLR 1 458 -9 6502 155 14 4 chr20 14890909 14892002 -57261880 - L1PA11 LINE L1 -1752 4394 3291 6143 104 15 0 chr20 14892004 14893750 -57260132 + L1PA11 LINE L1 4408 6174 0 9039 229 27 8 chr20 14894205 14897413 -57256469 + L1PA13 LINE L1 1229 4506 -2291 961 272 48 36 chr20 14897501 14897810 -57256072 + MLT1G LTR MaLR 251 563 -27 32 26 0 0 chr20 14897857 14897896 -57255986 + AT_rich Low_complexity Low_complexity 1 39 0 234 81 0 0 chr20 14898390 14898427 -57255455 + (A)n Simple_repeat Simple_repeat 1 37 0 14325 169 45 24 chr20 14898681 14901448 -57252434 + L1MA4A LINE L1 3411 6309 -1413 2194 58 0 0 chr20 14901448 14901724 -57252158 - L1PA5 LINE L1 0 6154 5879 14325 169 45 24 chr20 14901724 14903168 -57250714 + L1MA4A LINE L1 6309 7722 0 697 291 109 24 chr20 14903284 14903531 -57250351 - MLT1K LTR MaLR -158 430 163 5035 119 71 11 chr20 14903595 14904861 -57249021 + L1PB1 LINE L1 4833 6150 -1 237 317 48 59 chr20 14904952 14905138 -57248744 + L3 LINE CR1 1207 1390 -187 2340 98 0 3 chr20 14906282 14906589 -57247293 + AluSg SINE Alu 1 306 -4 4207 192 54 4 chr20 14906874 14907937 -57245945 - L1MB8 LINE L1 -5 6173 5060 474 227 77 66 chr20 14908225 14908533 -57245349 - MLT1H LTR MaLR -198 351 1 1676 197 0 33 chr20 14908772 14909072 -57244810 + AluJb SINE Alu 1 290 -22 40135 35 27 1 chr20 14909504 14915493 -57238389 + L1PA3 LINE L1 8 6155 0 958 304 64 15 chr20 14916229 14917557 -57236325 - L1ME3A LINE L1 -11 6159 4587 546 100 0 0 chr20 14917615 14917695 -57236187 - THE1C LTR MaLR -54 321 242 493 276 80 67 chr20 14917714 14918225 -57235657 - L1ME3A LINE L1 -1564 4582 4065 867 39 0 0 chr20 14918291 14918393 -57235489 + AluY SINE Alu 192 293 -18 492 236 24 77 chr20 14918393 14918601 -57235281 - L1ME3A LINE L1 -2158 3988 3792 3081 180 39 13 chr20 14918798 14919492 -57234390 - L1MB1 LINE L1 -164 6004 5293 198 0 0 0 chr20 14919544 14919566 -57234316 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 6362 201 50 7 chr20 14919568 14921162 -57232720 - L1MB1 LINE L1 -853 5293 3632 2431 223 77 5 chr20 14921170 14921951 -57231931 - L1MB1 LINE L1 -2865 3281 2445 446 332 76 16 chr20 14921964 14922214 -57231668 - L1ME3A LINE L1 -2410 3736 3472 24 0 0 0 chr20 14923086 14923110 -57230772 + AT_rich Low_complexity Low_complexity 1 24 0 1534 104 29 4 chr20 14924916 14925156 -57228726 - MER51A LTR ERV1 0 634 389 507 113 0 153 chr20 14925126 14925250 -57228632 - MER51B LTR ERV1 -272 105 1 * 1293 245 24 73 chr20 14925306 14925812 -57228070 + MLT1E3 LTR MaLR 139 619 -5 396 250 0 75 chr20 14925830 14925950 -57227932 - MER5B DNA MER1_type -67 111 1 496 267 59 30 chr20 14926023 14926158 -57227724 - L2 LINE L2 0 3272 3134 224 318 178 31 chr20 14926713 14926842 -57227040 + MER5B DNA MER1_type 17 164 -14 * 231 294 12 24 chr20 14926837 14926922 -57226960 - L2 LINE L2 -351 2963 2880 279 71 0 0 chr20 14927189 14927231 -57226651 + (A)n Simple_repeat Simple_repeat 1 42 0 757 321 84 24 chr20 14927557 14928008 -57225874 + L2 LINE L2 2832 3309 -4 1529 160 116 73 chr20 14928162 14928575 -57225307 - LTR49 LTR ERV1 -163 432 2 2601 55 0 0 chr20 14929335 14929646 -57224236 - AluY SINE Alu 0 311 1 577 277 11 5 chr20 14929648 14929836 -57224046 - MER5A DNA MER1_type 0 189 1 6956 215 52 58 chr20 14930312 14930494 -57223388 - L1MB1 LINE L1 0 6168 5986 1659 138 85 28 chr20 14930494 14930848 -57223034 + THE1C LTR MaLR 1 374 -1 6956 215 52 58 chr20 14930848 14933056 -57220826 - L1MB1 LINE L1 -182 5986 3766 777 163 0 35 chr20 14933056 14933197 -57220685 - AluJo SINE Alu -176 136 1 6956 215 52 58 chr20 14933197 14933461 -57220421 - L1MB1 LINE L1 -2402 3766 3502 2548 81 43 92 chr20 14933461 14933928 -57219954 - MLT2A1 LTR ERVL 0 444 1 6956 215 52 58 chr20 14933928 14935072 -57218810 - L1MB1 LINE L1 -2666 3502 2276 478 221 16 0 chr20 14935067 14935216 -57218666 + L1MB1 LINE L1 2132 2283 -3863 * 411 313 78 61 chr20 14935319 14935778 -57218104 - L1MC4a LINE L1 -222 5948 5601 260 164 55 0 chr20 14936174 14936229 -57217653 + MLT1G1 LTR MaLR 522 579 -16 374 262 105 24 chr20 14936260 14936470 -57217412 - L1MC4a LINE L1 -580 5590 5364 23 33 0 0 chr20 14936994 14937024 -57216858 + AT_rich Low_complexity Low_complexity 1 30 0 494 311 44 17 chr20 14937663 14937843 -57216039 - MIR SINE MIR -3 259 75 1121 247 60 73 chr20 14937924 14938373 -57215509 + LTR16A1 LTR ERVL 15 457 0 1318 213 118 0 chr20 14938694 14938966 -57214916 + AluJo SINE Alu 5 308 -4 2094 117 18 9 chr20 14939495 14939829 -57214053 - L1PA16 LINE L1 0 6166 5830 387 254 25 110 chr20 14940614 14940850 -57213032 - MLT1H LTR MaLR -155 394 179 1873 157 37 3 chr20 14942250 14942550 -57211332 - AluSx SINE Alu -2 310 1 357 256 23 23 chr20 14942911 14943044 -57210838 - MLT1H LTR MaLR -388 161 29 233 286 29 0 chr20 14943226 14943296 -57210586 + CT-rich Low_complexity Low_complexity 4 75 0 375 260 31 0 chr20 14943327 14943423 -57210459 - L2 LINE L2 -9 3304 3206 549 284 167 18 chr20 14944510 14944792 -57209090 - L2 LINE L2 0 3313 2990 414 296 50 17 chr20 14944891 14945070 -57208812 + LTR16A1 LTR ERVL 168 352 -105 225 240 0 0 chr20 14945131 14945181 -57208701 + LTR16C LTR ERVL 426 475 -16 2231 116 3 0 chr20 14945234 14945536 -57208346 + AluSx SINE Alu 3 305 -7 300 355 36 14 chr20 14945628 14945766 -57208116 + MIR3 SINE MIR 50 190 -18 22 56 0 0 chr20 14946214 14946250 -57207632 + AT_rich Low_complexity Low_complexity 1 36 0 1680 116 18 60 chr20 14946260 14946595 -57207287 - L1MA5A LINE L1 -5 6292 5972 344 237 75 43 chr20 14946913 14947006 -57206876 + MIR SINE MIR 49 144 -118 481 253 50 56 chr20 14947840 14948188 -57205694 - LTR16A1 LTR ERVL -1 456 16 279 331 14 40 chr20 14948577 14948725 -57205157 + MIR SINE MIR 57 200 -62 2251 115 0 0 chr20 14948757 14949061 -57204821 - AluSq SINE Alu -5 308 5 182 284 63 47 chr20 14949616 14949743 -57204139 + MIR SINE MIR 84 212 -50 643 241 29 6 chr20 14951006 14951176 -57202706 - LTR16C LTR ERVL 0 491 318 2805 116 39 77 chr20 14951649 14952182 -57201700 + LTR64 LTR ERVK 1 513 0 286 237 95 37 chr20 14953739 14953929 -57199953 - MER115 DNA AcHobo -242 451 251 1761 210 43 51 chr20 14953967 14954476 -57199406 + MLT1D LTR MaLR 1 505 0 829 229 33 0 chr20 14955771 14955954 -57197928 + MER5A DNA MER1_type 1 189 0 213 154 0 58 chr20 14956119 14956171 -57197711 + A-rich Low_complexity Low_complexity 2 50 0 229 333 36 22 chr20 14956502 14956640 -57197242 + MLT1K LTR MaLR 199 338 -250 1877 239 65 8 chr20 14956813 14957335 -57196547 - L1ME1 LINE L1 -69 6097 5546 551 40 0 13 chr20 14957740 14957815 -57196067 + (TAGA)n Simple_repeat Simple_repeat 1 74 0 252 0 0 0 chr20 14958694 14958722 -57195160 + (TG)n Simple_repeat Simple_repeat 2 29 0 367 252 43 22 chr20 14959139 14959278 -57194604 + LTR16C LTR ERVL 335 476 -15 428 298 49 72 chr20 14961587 14961892 -57191990 - L2 LINE L2 0 3313 3016 734 236 38 45 chr20 14961892 14962145 -57191737 + MLT1G1 LTR MaLR 1 297 -298 598 284 59 75 chr20 14963056 14963507 -57190375 + MLT1L LTR MaLR 16 405 -106 1093 317 54 39 chr20 14963621 14964138 -57189744 - MER115 DNA AcHobo 0 693 169 368 247 129 0 chr20 14964441 14964534 -57189348 + MER69 DNA AcHobo 1 105 -1121 1704 241 99 60 chr20 14964682 14965191 -57188691 + L1MB2 LINE L1 5550 6087 -84 1729 160 0 57 chr20 14965191 14965522 -57188360 - AluJo SINE Alu 0 312 1 1704 241 99 60 chr20 14965522 14965609 -57188273 + L1MB2 LINE L1 6087 6169 -2 883 311 119 7 chr20 14966229 14966657 -57187225 - LTR16C LTR ERVL -10 481 6 1833 191 57 40 chr20 14966713 14967168 -57186714 - MLT1C LTR MaLR -4 463 1 2857 10 0 0 chr20 14967455 14967765 -57186117 + AluYa5 SINE Alu 1 310 -1 409 303 0 106 chr20 14968302 14968510 -57185372 - MER5A DNA MER1_type -2 187 2 707 219 7 19 chr20 14968516 14968671 -57185211 + MER5A DNA MER1_type 4 156 -33 311 193 92 73 chr20 14969121 14969230 -57184652 - L1ME4a LINE L1 -27 6094 5984 217 169 15 31 chr20 14969297 14969362 -57184520 + (CATATA)n Simple_repeat Simple_repeat 2 65 0 198 0 0 0 chr20 14970062 14970084 -57183798 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 2079 132 0 0 chr20 14971817 14972106 -57181776 + AluSx SINE Alu 1 289 -23 424 269 98 93 chr20 14972143 14972541 -57181341 - MLT1J LTR MaLR -2 509 110 569 279 146 0 chr20 14972696 14972861 -57181021 + MER5A DNA MER1_type 1 189 0 4735 222 46 97 chr20 14972871 14974721 -57179161 + MER52A LTR ERV1 1 1755 0 370 212 227 23 chr20 14974872 14975004 -57178878 - MER5A DNA MER1_type -5 184 26 917 199 0 23 chr20 14975018 14975194 -57178688 + MER5A DNA MER1_type 15 186 -3 1681 189 81 35 chr20 14975281 14975652 -57178230 - MLT1B LTR MaLR 0 390 3 441 210 8 0 chr20 14975654 14975749 -57178133 - MER5A DNA MER1_type -93 96 1 226 382 0 32 chr20 14975989 14976112 -57177770 + L3 LINE CR1 729 847 -730 701 253 18 29 chr20 14976438 14976503 -57177379 + MER5B DNA MER1_type 10 74 -104 1544 200 72 88 chr20 14976503 14976932 -57176950 - MLT1C LTR MaLR 0 467 45 1336 186 115 11 chr20 14976932 14977211 -57176671 - AluSg SINE Alu -2 308 1 1544 200 72 88 chr20 14977211 14977256 -57176626 - MLT1C LTR MaLR -422 45 1 701 253 18 29 chr20 14977256 14977360 -57176522 + MER5B DNA MER1_type 74 177 -1 654 204 70 35 chr20 14977521 14977693 -57176189 - MER5B DNA MER1_type 0 178 1 566 312 75 35 chr20 14977866 14978264 -57175618 + L2 LINE L2 1686 2099 -1215 340 175 38 38 chr20 14978288 14978368 -57175514 - MER116 DNA Mariner 0 80 1 274 362 57 7 chr20 14978708 14978849 -57175033 + L2 LINE L2 2213 2360 -954 324 253 19 13 chr20 14978881 14979082 -57174800 + MLT1F LTR MaLR 20 211 -319 316 230 36 86 chr20 14979143 14979230 -57174652 + MLT1G LTR MaLR 457 536 -54 1889 199 64 89 chr20 14979230 14979794 -57174088 - MLT2B3 LTR ERVL -1 553 4 316 230 36 86 chr20 14979794 14979845 -57174037 + MLT1G LTR MaLR 536 588 -2 515 259 76 16 chr20 14980097 14980282 -57173600 - MER117 DNA MER1_type 0 197 2 1326 234 108 18 chr20 14980489 14980877 -57173005 + MLT1H LTR MaLR 6 428 -121 216 0 0 0 chr20 14981626 14981650 -57172232 + (T)n Simple_repeat Simple_repeat 1 24 0 455 253 143 55 chr20 14981915 14982351 -57171531 + MLT1H LTR MaLR 72 592 -3 24 0 0 0 chr20 14983252 14983276 -57170606 + AT_rich Low_complexity Low_complexity 1 24 0 662 239 165 71 chr20 14985006 14985091 -57168791 - L2 LINE L2 -1 3312 3236 2298 88 7 0 chr20 14985091 14985385 -57168497 + AluSq SINE Alu 1 296 -17 662 239 165 71 chr20 14985385 14985663 -57168219 - L2 LINE L2 -77 3236 2915 1579 222 162 40 chr20 14985668 14986194 -57167688 + MLT1G1 LTR MaLR 6 595 0 346 256 181 15 chr20 14986194 14986327 -57167555 - L2 LINE L2 -417 2897 2743 331 310 121 0 chr20 14987609 14987725 -57166157 - MIR3 SINE MIR -9 199 70 195 292 83 0 chr20 14987890 14987962 -57165920 + L2 LINE L2 3168 3245 -27 325 242 132 0 chr20 14988072 14988163 -57165719 - L2 LINE L2 -21 3292 3190 1813 279 48 35 chr20 14989621 14990240 -57163642 - MLT2E LTR ERVL 0 628 2 935 233 201 72 chr20 14990544 14990655 -57163227 + L1MB8 LINE L1 5616 5711 -467 9480 166 7 2 chr20 14990655 14993016 -57160866 - L1PA14 LINE L1 -17 6144 3767 935 233 201 72 chr20 14993016 14993401 -57160481 + L1MB8 LINE L1 5711 6176 -2 865 321 33 40 chr20 14993518 14993939 -57159943 - MLT1J2 LTR MaLR -3 447 30 772 318 111 21 chr20 14994971 14995462 -57158420 + L2 LINE L2 2730 3266 -47 2060 183 17 13 chr20 14995477 14995935 -57157947 - MER89 LTR ERV1 0 559 1 195 129 0 0 chr20 14996748 14996779 -57157103 + (A)n Simple_repeat Simple_repeat 1 31 0 688 243 28 11 chr20 14997726 14997903 -57155979 + MER5A DNA MER1_type 10 189 0 577 332 97 31 chr20 14998121 14998727 -57155155 + L2 LINE L2 1807 2452 -862 257 309 202 18 chr20 14999022 14999245 -57154637 + L2 LINE L2 2824 3087 -185 23 33 0 0 chr20 14999387 14999417 -57154465 + AT_rich Low_complexity Low_complexity 1 30 0 504 309 18 73 chr20 15000693 15000968 -57152914 + MIR SINE MIR 3 262 0 478 246 27 0 chr20 15001705 15001815 -57152067 - MER81 DNA DNA 0 114 2 2754 213 42 10 chr20 15004172 15004958 -57148924 - L1ME1 LINE L1 -7 6657 5820 1692 172 89 0 chr20 15004959 15005296 -57148586 + L1MB4 LINE L1 5584 5950 -230 315 111 222 0 chr20 15005296 15005359 -57148523 + AluS SINE Alu 2 78 -225 1150 204 19 45 chr20 15005359 15005387 -57148495 + L1MB4 LINE L1 5922 5949 -231 2403 102 0 0 chr20 15005387 15005700 -57148182 + AluSq SINE Alu 1 313 0 1150 204 19 45 chr20 15005700 15005935 -57147947 + L1MB4 LINE L1 5949 6178 -2 4518 221 68 48 chr20 15005959 15007512 -57146370 - L1ME1 LINE L1 -840 5804 4220 2880 234 43 19 chr20 15007541 15008427 -57145455 - L1ME1 LINE L1 -3072 3572 2666 483 63 0 0 chr20 15008479 15008542 -57145340 + (TA)n Simple_repeat Simple_repeat 2 64 0 267 172 25 123 chr20 15008552 15008674 -57145208 + MLT1C LTR MaLR 58 167 -300 1210 197 62 48 chr20 15008761 15009051 -57144831 + MLT1C LTR MaLR 172 465 -2 808 279 35 48 chr20 15009061 15009735 -57144147 - L1ME1 LINE L1 -4128 2697 1899 194 0 39 0 chr20 15009746 15009772 -57144110 + (TTA)n Simple_repeat Simple_repeat 1 27 0 5811 185 32 35 chr20 15009815 15012122 -57141760 - L1PA16 LINE L1 -9 6157 3864 2982 260 8 5 chr20 15012117 15012974 -57140908 + L1PA16 LINE L1 3008 3867 -2279 * 1070 198 30 67 chr20 15012963 15013068 -57140814 - L1ME1 LINE L1 -4752 1894 1787 * 2110 111 3 32 chr20 15013068 15013384 -57140498 - AluSx SINE Alu -5 307 1 1070 198 30 67 chr20 15013384 15013607 -57140275 - L1ME1 LINE L1 -4859 1787 1578 * 3179 251 18 10 chr20 15013599 15014527 -57139355 - L1M4 LINE L1 -2258 3888 2953 675 282 9 5 chr20 15014569 15014789 -57139093 - L1ME1 LINE L1 -4973 1569 1349 6450 45 5 0 chr20 15014797 15015582 -57138300 - L1PA5 LINE L1 0 6154 5366 5141 226 53 20 chr20 15015583 15015781 -57138101 - L1ME1 LINE L1 -5178 1364 1174 2384 65 0 29 chr20 15015781 15016087 -57137795 + AluY SINE Alu 1 297 -14 5141 226 53 20 chr20 15016087 15016459 -57137423 - L1ME1 LINE L1 -5368 1174 816 405 0 0 0 chr20 15016459 15016504 -57137378 + (TG)n Simple_repeat Simple_repeat 2 46 0 5141 226 53 20 chr20 15016504 15017248 -57136634 - L1ME1 LINE L1 -5726 816 5 274 296 0 14 chr20 15018825 15018896 -57134986 - L2 LINE L2 0 3313 3244 843 221 10 25 chr20 15019052 15019251 -57134631 - MER3 DNA MER1_type -2 207 12 32 43 0 0 chr20 15020097 15020143 -57133739 + AT_rich Low_complexity Low_complexity 1 46 0 988 287 80 12 chr20 15020205 15020630 -57133252 - LTR16A1 LTR ERVL -3 454 1 646 270 47 43 chr20 15020923 15021134 -57132748 + MIR SINE MIR 15 226 -36 644 299 86 21 chr20 15021219 15021453 -57132429 + MIR SINE MIR 1 249 -13 1414 245 133 16 chr20 15021725 15022170 -57131712 - MLT1H LTR MaLR -7 542 46 1523 251 95 13 chr20 15023041 15023495 -57130387 - LTR16C LTR ERVL 0 491 1 2167 115 6 3 chr20 15023873 15024185 -57129697 + AluSp SINE Alu 1 313 0 1094 285 98 5 chr20 15024781 15025199 -57128683 + LTR16A1 LTR ERVL 1 457 0 181 358 11 0 chr20 15025235 15025330 -57128552 + MIR SINE MIR 47 142 -66 513 216 61 7 chr20 15025356 15025504 -57128378 + LTR16A1 LTR ERVL 302 457 0 1018 281 114 17 chr20 15025975 15026380 -57127502 + LTR16A1 LTR ERVL 4 447 -10 366 235 0 0 chr20 15027370 15027451 -57126431 + MER96B DNA MER1_type? 30 110 -307 4371 196 58 35 chr20 15027452 15029393 -57124489 - L1MB1 LINE L1 -5 5987 3999 2258 237 32 29 chr20 15029390 15030079 -57123803 - L1MB1 LINE L1 -2191 3779 3089 * 354 295 36 5 chr20 15030094 15030287 -57123595 - L1MB1 LINE L1 -4211 1761 1563 2967 224 22 66 chr20 15030296 15031476 -57122406 - L1MB1 LINE L1 -4535 1437 409 377 308 60 71 chr20 15031574 15031938 -57121944 - L1MB1 LINE L1 -5527 364 5 321 169 48 12 chr20 15031947 15032030 -57121852 + MER96B DNA MER1_type? 96 181 -236 353 272 60 92 chr20 15033275 15033525 -57120357 - L2 LINE L2 0 3313 3072 334 195 0 103 chr20 15033597 15033684 -57120198 - MER58 DNA MER1_type -1 2419 2342 244 307 0 69 chr20 15033758 15033859 -57120023 - MER58 DNA MER1_type -247 94 1 474 312 192 16 chr20 15034544 15034977 -57118905 + L2 LINE L2 2804 3312 -1 2331 193 61 11 chr20 15036335 15036812 -57117070 + L1MCa LINE L1 26 526 -5900 498 204 11 0 chr20 15037124 15037212 -57116670 + MER3 DNA MER1_type 47 135 -74 22 35 0 0 chr20 15037479 15037508 -57116374 + AT_rich Low_complexity Low_complexity 1 29 0 492 359 66 13 chr20 15037638 15037942 -57115940 - LTR16C LTR ERVL -99 392 73 707 132 24 113 chr20 15038776 15038988 -57114894 + Charlie5 DNA MER1_type 2393 2585 -27 485 291 77 48 chr20 15038986 15039361 -57114521 + MLT1L LTR MaLR 146 531 -84 * 271 302 10 10 chr20 15039691 15039787 -57114095 - MER33 DNA MER1_type -228 96 1 1248 266 46 44 chr20 15039891 15040346 -57113536 + LTR16A1 LTR ERVL 2 457 0 183 261 62 31 chr20 15041374 15041439 -57112443 - L2 LINE L2 -1 3312 3246 346 253 53 0 chr20 15042376 15042451 -57111431 - L2 LINE L2 0 3272 3194 206 156 0 0 chr20 15042622 15042654 -57111228 - MIR SINE MIR -144 118 87 806 216 34 29 chr20 15043036 15043240 -57110642 - LTR16A1 LTR ERVL -13 444 240 698 306 79 45 chr20 15044069 15044448 -57109434 + MLT1J2 LTR MaLR 59 450 0 642 317 111 37 chr20 15044880 15045287 -57108595 - MLT1H LTR MaLR -3 546 110 807 239 83 23 chr20 15045387 15045605 -57108277 + MIR SINE MIR 30 260 -2 1418 171 74 93 chr20 15045821 15046348 -57107534 - MER67C LTR ERV1 -32 482 1 802 297 56 13 chr20 15047754 15048060 -57105822 - LTR16C LTR ERVL -1 490 172 211 315 62 56 chr20 15048594 15048772 -57105110 + MIR SINE MIR 32 210 -52 180 0 0 0 chr20 15049729 15049749 -57104133 + (A)n Simple_repeat Simple_repeat 1 20 0 1131 221 22 67 chr20 15049752 15049814 -57104068 + L1ME3 LINE L1 5816 5879 -283 1896 123 68 41 chr20 15049814 15050179 -57103703 + THE1C LTR MaLR 1 375 0 1131 221 22 67 chr20 15050179 15050474 -57103408 + L1ME3 LINE L1 5879 6157 -5 201 121 0 0 chr20 15050477 15050510 -57103372 + (CA)n Simple_repeat Simple_repeat 2 34 0 324 159 0 32 chr20 15050563 15050626 -57103256 - MER5A DNA MER1_type -1 188 128 1921 152 26 3 chr20 15050630 15050932 -57102950 + AluSx SINE Alu 3 311 -1 202 152 0 177 chr20 15050981 15051060 -57102822 + MER5B DNA MER1_type 97 161 -17 240 300 134 23 chr20 15051133 15051307 -57102575 - MIR SINE MIR -55 207 5 558 280 33 67 chr20 15051390 15051690 -57102192 - MER5C DNA MER1_type -8 316 27 270 170 57 0 chr20 15051708 15051761 -57102121 + MER5C DNA MER1_type 17 72 -252 309 322 137 26 chr20 15051824 15052094 -57101788 - L3 LINE CR1 -218 1359 1060 218 396 22 0 chr20 15052119 15052210 -57101672 + L2 LINE L2 33 125 -3189 220 362 8 24 chr20 15052232 15052359 -57101523 - L2 LINE L2 -2666 648 524 3475 294 217 15 chr20 15052380 15054855 -57099027 + L2 LINE L2 328 3313 0 766 329 59 33 chr20 15054864 15055201 -57098681 - L3 LINE CR1 -526 1051 706 922 238 136 81 chr20 15055292 15055871 -57098011 + MLT1G LTR MaLR 1 584 -6 416 241 153 7 chr20 15057793 15057930 -57095952 - MLT1H LTR MaLR -38 511 355 267 230 54 40 chr20 15058044 15058118 -57095764 - MLT1H LTR MaLR -368 181 107 442 197 13 0 chr20 15058237 15058274 -57095608 + MER3 DNA MER1_type 10 47 -162 504 203 49 16 chr20 15058274 15058397 -57095485 - MER3 DNA MER1_type 0 209 83 1948 183 89 27 chr20 15058781 15059236 -57094646 - L1MA9 LINE L1 -1 6311 5821 495 188 86 55 chr20 15059236 15059364 -57094518 - FLAM_A SINE Alu -1 132 1 1948 183 89 27 chr20 15059364 15059384 -57094498 - L1MA9 LINE L1 -491 5821 5804 21 0 0 0 chr20 15059616 15059637 -57094245 + AT_rich Low_complexity Low_complexity 1 21 0 202 279 0 15 chr20 15060015 15060083 -57093799 + T-rich Low_complexity Low_complexity 2 68 0 245 345 57 48 chr20 15060803 15061012 -57092870 - L2 LINE L2 -144 3128 2918 28 29 0 0 chr20 15061078 15061113 -57092769 + AT_rich Low_complexity Low_complexity 1 35 0 2038 102 16 10 chr20 15061707 15062010 -57091872 - L1PA13 LINE L1 -236 5927 5623 1649 85 0 0 chr20 15062012 15062236 -57091646 + L1PA13 LINE L1 5932 6155 -8 196 232 232 42 chr20 15062432 15062527 -57091355 + MIR3 SINE MIR 4 116 -92 500 229 183 0 chr20 15062593 15062746 -57091136 + MER5A DNA MER1_type 9 189 0 207 179 0 0 chr20 15063581 15063620 -57090262 + (GGCTG)n Simple_repeat Simple_repeat 2 40 0 235 315 34 34 chr20 15063650 15063796 -57090086 - MLT1H LTR MaLR -196 353 208 2497 81 3 0 chr20 15064051 15064385 -57089497 + L1PA7 LINE L1 5817 6151 -3 261 210 0 0 chr20 15065907 15065969 -57087913 + (TGAA)n Simple_repeat Simple_repeat 3 64 0 323 226 0 24 chr20 15066232 15066316 -57087566 - MER33 DNA MER1_type 0 324 243 1532 185 15 85 chr20 15066320 15066731 -57087151 + MLT1B LTR MaLR 3 384 -6 614 166 171 68 chr20 15066762 15066967 -57086915 - MER33 DNA MER1_type -97 227 2 259 294 111 71 chr20 15067856 15068459 -57085423 + L2 LINE L2 2147 2773 -541 515 204 68 37 chr20 15068522 15068684 -57085198 + MER5A DNA MER1_type 1 167 -22 1232 114 21 114 chr20 15068685 15068964 -57084918 + AluSq SINE Alu 69 325 0 1961 218 78 30 chr20 15068988 15069594 -57084288 - MER92B LTR ERV1 0 636 2 220 352 28 0 chr20 15069743 15069851 -57084031 + L2 LINE L2 3161 3271 -1 1307 211 75 67 chr20 15071250 15071638 -57082244 - LTR16C LTR ERVL 0 491 101 225 296 0 0 chr20 15071782 15071836 -57082046 + MER5B DNA MER1_type 1 54 -124 4254 164 63 29 chr20 15071847 15072805 -57081077 + L1MC2 LINE L1 5340 6329 -15 327 319 0 11 chr20 15072827 15072921 -57080961 + MER5B DNA MER1_type 86 178 0 268 287 63 56 chr20 15073197 15073340 -57080542 - MER5A DNA MER1_type -25 164 21 547 198 5 165 chr20 15073375 15073587 -57080295 - MER5B DNA MER1_type 0 178 1 7494 154 5 10 chr20 15073991 15076117 -57077765 - L1PA13 LINE L1 0 6163 4031 713 200 19 19 chr20 15076613 15076773 -57077109 - MLT1E1 LTR MaLR 0 654 495 327 143 52 13 chr20 15076773 15076850 -57077032 + L1MC2 LINE L1 6155 6234 -110 783 270 119 42 chr20 15077067 15077522 -57076360 - MLT1E1 LTR MaLR -164 490 1 324 176 47 12 chr20 15077907 15077992 -57075890 + LTR37B LTR ERV1 198 285 -183 525 250 19 6 chr20 15078070 15078230 -57075652 + MLT1E3 LTR MaLR 385 546 -78 429 203 41 0 chr20 15078301 15078424 -57075458 + LTR37A LTR ERV1 299 426 0 229 296 19 9 chr20 15078925 15079033 -57074849 + (TA)n Simple_repeat Simple_repeat 2 110 0 1003 243 70 77 chr20 15079238 15079694 -57074188 + LTR16A1 LTR ERVL 4 456 -1 443 308 30 12 chr20 15080403 15080572 -57073310 - MLT1K LTR MaLR -263 325 154 512 273 82 27 chr20 15081433 15081653 -57072229 - MLT1H1 LTR MaLR -2 553 322 2563 162 7 21 chr20 15081900 15082333 -57071549 - MSTC LTR MaLR 0 428 2 547 324 60 43 chr20 15082940 15083190 -57070692 - MIR SINE MIR -1 261 12 574 229 72 24 chr20 15083329 15083495 -57070387 - MER5B DNA MER1_type -4 174 1 2089 86 11 0 chr20 15083592 15083908 -57069974 - AluY SINE Alu 0 319 1 207 359 64 0 chr20 15083910 15083988 -57069894 + L2 LINE L2 2936 3018 -254 1620 201 10 16 chr20 15084634 15084943 -57068939 + AluJo SINE Alu 1 307 -5 541 302 31 59 chr20 15085161 15085416 -57068466 - MIR SINE MIR -4 258 11 375 235 34 27 chr20 15085585 15085734 -57068148 + L1ME4a LINE L1 5945 6094 -27 21 36 0 0 chr20 15086173 15086201 -57067681 + AT_rich Low_complexity Low_complexity 1 28 0 1574 163 10 39 chr20 15086211 15086518 -57067364 + AluJo SINE Alu 11 308 -4 194 317 0 17 chr20 15086983 15087043 -57066839 + MIR SINE MIR 3 61 -201 372 43 0 0 chr20 15087052 15087098 -57066784 + (TCC)n Simple_repeat Simple_repeat 3 48 0 1430 203 3 41 chr20 15087103 15087398 -57066484 - AluJo SINE Alu -28 284 1 1804 188 0 25 chr20 15087665 15087985 -57065897 + AluJb SINE Alu 1 312 0 2136 126 0 3 chr20 15088836 15089129 -57064753 + AluSx SINE Alu 1 292 -20 274 374 28 0 chr20 15089642 15089749 -57064133 + MIR SINE MIR 9 118 -144 409 228 19 37 chr20 15090148 15090363 -57063519 + GA-rich Low_complexity Low_complexity 1 211 0 190 261 273 0 chr20 15090423 15090511 -57063371 + L3 LINE CR1 1446 1557 -20 21 0 0 0 chr20 15091449 15091470 -57062412 + AT_rich Low_complexity Low_complexity 1 21 0 273 369 85 7 chr20 15091853 15091994 -57061888 - MIR3 SINE MIR -45 163 12 230 300 71 0 chr20 15092207 15092277 -57061605 + L2 LINE L2 3239 3313 0 458 265 0 120 chr20 15092658 15092892 -57060990 + LTR16C LTR ERVL 286 491 0 180 0 0 0 chr20 15093035 15093055 -57060827 + (T)n Simple_repeat Simple_repeat 1 20 0 967 227 61 52 chr20 15093227 15093570 -57060312 + LTR16A1 LTR ERVL 112 457 0 285 279 178 31 chr20 15094124 15094253 -57059629 - MER5A DNA MER1_type 0 189 42 1655 141 97 64 chr20 15094372 15094776 -57059106 - MSTB1 LTR MaLR -12 420 4 6335 94 31 0 chr20 15095227 15096257 -57057625 - L1PA11 LINE L1 0 6174 5136 1106 251 84 12 chr20 15096257 15096581 -57057301 + L1PA12 LINE L1 661 1011 -6570 * 4640 108 10 1 chr20 15096574 15097262 -57056620 - THE1A-int LTR MaLR -886 694 1 2661 90 3 3 chr20 15097262 15097617 -57056265 - THE1A LTR MaLR 0 355 1 682 306 20 0 chr20 15097654 15098053 -57055829 + L1M4 LINE L1 3079 3485 -2661 71 95 0 0 chr20 15098053 15098264 -57055618 + AT_rich Low_complexity Low_complexity 1 211 0 2219 212 17 71 chr20 15098268 15099027 -57054855 + L1M4 LINE L1 3522 4239 -1907 14426 185 29 21 chr20 15099037 15102507 -57051375 + L1MA3 LINE L1 16 3457 -4267 279 0 0 0 chr20 15102507 15102538 -57051344 + (TG)n Simple_repeat Simple_repeat 2 32 0 14426 185 29 21 chr20 15102538 15105252 -57048630 + L1MA3 LINE L1 3457 6148 -1576 257 0 30 0 chr20 15105252 15105285 -57048597 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 14426 185 29 21 chr20 15105285 15105978 -57047904 + L1MA3 LINE L1 6148 6834 -890 2063 126 7 0 chr20 15105978 15106272 -57047610 + AluSx SINE Alu 1 296 -16 14426 185 29 21 chr20 15106272 15106730 -57047152 + L1MA3 LINE L1 6834 7704 -20 28 0 0 0 chr20 15106770 15106798 -57047084 + AT_rich Low_complexity Low_complexity 1 28 0 202 216 20 20 chr20 15107255 15107306 -57046576 - L2 LINE L2 -6 3266 3216 342 345 18 0 chr20 15107339 15107449 -57046433 + L2 LINE L2 3202 3313 0 761 203 39 0 chr20 15107615 15107797 -57046085 + MER53 DNA DNA 1 189 0 201 195 0 0 chr20 15107858 15107899 -57045983 + (TAAA)n Simple_repeat Simple_repeat 3 43 0 2117 194 75 8 chr20 15108333 15108803 -57045079 - MLT1D LTR MaLR 0 505 5 24 0 0 0 chr20 15108910 15108934 -57044948 + AT_rich Low_complexity Low_complexity 1 24 0 537 281 47 12 chr20 15109021 15109192 -57044690 + MER5B DNA MER1_type 1 177 -1 291 271 0 17 chr20 15109310 15109428 -57044454 + (TTATA)n Simple_repeat Simple_repeat 4 119 0 271 327 29 0 chr20 15109547 15109651 -57044231 + MIR3 SINE MIR 96 202 -6 1016 298 83 14 chr20 15109733 15110152 -57043730 - LTR16C LTR ERVL 0 491 44 697 211 8 0 chr20 15110847 15110970 -57042912 - FLAM_A SINE Alu -9 124 1 2610 180 10 68 chr20 15111177 15111765 -57042117 + MER41C LTR ERV1 1 554 0 1238 147 30 35 chr20 15111872 15112103 -57041779 + MER30 DNA MER1_type 1 230 0 540 266 12 18 chr20 15112164 15112333 -57041549 + MLT1H LTR MaLR 382 549 0 674 275 87 0 chr20 15114040 15114269 -57039613 + LTR16A1 LTR ERVL 179 427 -30 250 235 62 74 chr20 15114325 15114406 -57039476 - MIR SINE MIR -148 114 35 453 236 18 0 chr20 15115817 15115927 -57037955 + MLT1H LTR MaLR 225 336 -213 1655 192 20 6 chr20 15115930 15116273 -57037609 + MLT1A1 LTR MaLR 1 348 -17 237 335 155 25 chr20 15116486 15116647 -57037235 - MIR SINE MIR -77 185 4 268 23 0 23 chr20 15117014 15117057 -57036825 - AluY SINE Alu -2 298 257 1203 62 0 7 chr20 15117057 15117202 -57036680 - AluY SINE Alu -125 186 43 3035 118 6 2 chr20 15119260 15119734 -57034148 - L1MA4A LINE L1 -7 6296 5821 13261 195 32 26 chr20 15119740 15123510 -57030372 - L1 LINE L1 -3051 3797 5 24 0 0 0 chr20 15124304 15124328 -57029554 + AT_rich Low_complexity Low_complexity 1 24 0 1481 92 0 0 chr20 15125542 15125761 -57028121 + AluY SINE Alu 98 316 0 2574 116 11 0 chr20 15126165 15126536 -57027346 - THE1C LTR MaLR 0 375 1 9107 111 77 8 chr20 15126536 15127996 -57025886 - THE1C-int LTR MaLR 0 1580 20 2212 127 75 0 chr20 15127996 15128343 -57025539 - THE1C LTR MaLR -2 373 1 272 300 30 0 chr20 15128499 15128599 -57025283 - MLT1I LTR MaLR -2 407 305 968 259 12 8 chr20 15130956 15131215 -57022667 + MIR SINE MIR 3 262 0 2876 223 47 1 chr20 15131341 15131395 -57022487 - L1 LINE L1 -1834 4312 4262 510 17 0 0 chr20 15131395 15131454 -57022428 + (TG)n Simple_repeat Simple_repeat 1 59 0 2876 223 47 1 chr20 15131454 15132167 -57021715 - L1 LINE L1 -1884 4262 3510 1178 257 143 80 chr20 15132199 15132384 -57021498 - L1MC4 LINE L1 -26 8016 7844 2369 85 0 0 chr20 15132384 15132678 -57021204 - AluY SINE Alu -17 294 1 1178 257 143 80 chr20 15132678 15133508 -57020374 - L1MC4 LINE L1 -198 7844 6937 957 76 0 8 chr20 15134021 15134153 -57019729 + AluSg/x SINE Alu 182 312 0 1179 248 59 30 chr20 15134399 15134838 -57019044 + LTR16A1 LTR ERVL 1 452 -5 486 333 86 35 chr20 15136389 15136842 -57017040 - MLT1K LTR MaLR 0 476 1 218 321 110 43 chr20 15137470 15137679 -57016203 - MIR SINE MIR -20 242 20 2251 85 10 17 chr20 15138105 15138400 -57015482 - AluSg SINE Alu -17 293 1 2235 221 53 8 chr20 15139224 15139811 -57014071 - L1MD2 LINE L1 0 6428 5816 507 271 161 0 chr20 15140102 15140257 -57013625 - MER5A DNA MER1_type -2 187 8 188 320 0 64 chr20 15140780 15140858 -57013024 + L3 LINE CR1 1267 1339 -238 1219 244 66 12 chr20 15141004 15141036 -57012846 - MER58B DNA MER1_type -2083 337 308 234 0 0 0 chr20 15141036 15141062 -57012820 + (TAAG)n Simple_repeat Simple_repeat 3 28 0 1219 244 66 12 chr20 15141062 15141349 -57012533 - MER58B DNA MER1_type -2112 308 1 206 388 23 0 chr20 15141999 15142128 -57011754 - MIR SINE MIR -79 183 52 23 68 0 0 chr20 15142630 15142674 -57011208 + AT_rich Low_complexity Low_complexity 1 44 0 1039 197 119 63 chr20 15142696 15143031 -57010851 + MLT1A1 LTR MaLR 4 357 -8 26 0 0 0 chr20 15143092 15143118 -57010764 + AT_rich Low_complexity Low_complexity 1 26 0 3564 191 21 15 chr20 15143205 15144011 -57009871 + L1MD1 LINE L1 5427 6237 -5 379 321 5 5 chr20 15144162 15144349 -57009533 + L1ME LINE L1 5623 5809 -312 374 212 178 17 chr20 15144505 15144623 -57009259 + MIR SINE MIR 76 212 -50 840 240 22 0 chr20 15146501 15146680 -57007202 - MER5A DNA MER1_type -5 184 2 252 268 24 0 chr20 15146859 15146941 -57006941 - L1MD2 LINE L1 -353 5837 5754 448 308 96 42 chr20 15146942 15147296 -57006586 - L1MD2 LINE L1 -507 5726 5354 2561 60 0 0 chr20 15147389 15147691 -57006191 - AluY SINE Alu -9 302 1 2411 245 62 15 chr20 15147706 15148513 -57005369 + L1ME3 LINE L1 5315 6159 -3 192 238 0 0 chr20 15149046 15149109 -57004773 + (TA)n Simple_repeat Simple_repeat 2 64 0 2588 52 3 0 chr20 15149373 15149678 -57004204 + AluY SINE Alu 1 306 -5 180 0 0 0 chr20 15151777 15151797 -57002085 + (TTA)n Simple_repeat Simple_repeat 2 21 0 2287 102 0 3 chr20 15151800 15152095 -57001787 - AluSx SINE Alu -18 294 1 659 177 64 0 chr20 15152111 15152252 -57001630 - L1MA10 LINE L1 -3 6331 6182 282 213 0 0 chr20 15152285 15152346 -57001536 - L1MD2 LINE L1 -1830 4385 4325 1212 208 16 73 chr20 15152370 15152754 -57001128 - L1MD2 LINE L1 -2022 4193 3832 941 240 56 30 chr20 15152767 15153230 -57000652 - L1MD2 LINE L1 -4895 1501 1027 * 1197 289 34 22 chr20 15153227 15153643 -57000239 - L1MD2 LINE L1 -5940 456 36 27 49 0 0 chr20 15153792 15153833 -57000049 + AT_rich Low_complexity Low_complexity 1 41 0 979 265 191 5 chr20 15153872 15154317 -56999565 + MLT1H LTR MaLR 3 530 -19 837 185 0 0 chr20 15155425 15155560 -56998322 + AluJo SINE Alu 1 135 -177 1413 179 29 71 chr20 15155560 15155868 -56998014 + AluJo SINE Alu 1 295 -17 922 239 14 5 chr20 15156124 15156346 -56997536 + MER58A DNA MER1_type 1 224 0 976 226 108 79 chr20 15157619 15158089 -56995793 - MLT1D LTR MaLR -3 502 19 258 339 70 11 chr20 15159745 15159931 -56993951 - MIR SINE MIR -13 249 53 24 32 0 0 chr20 15160378 15160409 -56993473 + AT_rich Low_complexity Low_complexity 1 31 0 282 219 0 0 chr20 15160409 15160482 -56993400 - L1ME3A LINE L1 -14 6436 6364 1657 258 76 13 chr20 15160565 15160792 -56993090 - L1ME3A LINE L1 -230 6220 6009 1618 141 52 0 chr20 15160792 15161040 -56992842 - AluJb SINE Alu -49 263 3 1657 258 76 13 chr20 15161040 15161598 -56992284 - L1ME3A LINE L1 -441 6009 5383 563 288 111 48 chr20 15161611 15162136 -56991746 - L1ME3A LINE L1 -1088 5338 4781 2491 131 2 60 chr20 15162265 15162717 -56991165 - LTR9 LTR ERV1 -186 426 1 416 283 60 20 chr20 15162950 15163141 -56990741 - L1ME3A LINE L1 -1782 4644 4439 2112 120 13 26 chr20 15163141 15163450 -56990432 - AluSg SINE Alu -5 305 1 416 283 60 20 chr20 15163450 15163509 -56990373 - L1ME3A LINE L1 -1987 4439 4384 476 238 20 0 chr20 15163637 15163738 -56990144 - AluJo SINE Alu -25 287 185 2625 95 51 14 chr20 15163738 15164170 -56989712 - LTR7 LTR ERV1 -2 448 1 2362 88 39 16 chr20 15164170 15164554 -56989328 - HERVH LTR ERV1 0 7713 7321 1304 128 18 9 chr20 15164551 15164769 -56989113 - HERVH LTR ERV1 -1894 5819 5600 * 4167 137 0 1 chr20 15164770 15165433 -56988449 - HERVH LTR ERV1 -2564 5149 4488 3136 115 6 6 chr20 15165433 15165937 -56987945 - HERVH LTR ERV1 -3718 3995 3492 939 120 7 0 chr20 15165927 15166077 -56987805 - HERVH LTR ERV1 -4423 3290 3140 * 16299 89 20 11 chr20 15166056 15168975 -56984907 - HERVH LTR ERV1 -4718 2995 1 2603 97 51 14 chr20 15168977 15169409 -56984473 - LTR7 LTR ERV1 -2 448 1 1179 168 0 5 chr20 15169409 15169600 -56984282 - AluJo SINE Alu -121 191 2 1464 261 91 63 chr20 15169606 15171070 -56982812 - L1ME3A LINE L1 -2188 4238 2735 305 247 133 40 chr20 15171345 15171495 -56982387 - L1ME3A LINE L1 -3698 2728 2565 2759 169 7 31 chr20 15171727 15172279 -56981603 + MER34B LTR ERV1 1 539 -26 351 271 81 51 chr20 15172600 15172836 -56981046 + MER102a DNA MER1_type 88 330 0 351 280 60 0 chr20 15174868 15174968 -56978914 + MLT1H LTR MaLR 249 354 -195 228 293 70 15 chr20 15175602 15175875 -56978007 + L1ME LINE L1 2187 2474 -3672 341 245 64 27 chr20 15175932 15176120 -56977762 + L1ME LINE L1 5051 5245 -901 239 252 39 52 chr20 15176143 15176298 -56977584 + L1ME LINE L1 5767 5919 -247 501 348 40 18 chr20 15178156 15178484 -56975398 - LTR16B LTR ERVL -67 397 63 422 296 69 60 chr20 15178592 15178909 -56974973 - MLT1I LTR MaLR -25 384 65 285 29 0 0 chr20 15179068 15179102 -56974780 + (CA)n Simple_repeat Simple_repeat 2 35 0 28 0 0 0 chr20 15179562 15179590 -56974292 + AT_rich Low_complexity Low_complexity 1 28 0 428 273 29 29 chr20 15180309 15180481 -56973401 - L1ME3A LINE L1 -5182 1244 1073 3754 224 20 13 chr20 15180494 15181739 -56972143 + L1PA15-16 LINE L1 11 1569 -5280 765 234 21 0 chr20 15181719 15181907 -56971975 + L1PA15-16 LINE L1 1336 1527 -5323 * 4356 251 27 46 chr20 15182305 15183034 -56970848 + L1PA15-16 LINE L1 1419 2160 -4689 23468 31 1 0 chr20 15183034 15186643 -56967239 - L1PA3 LINE L1 0 6155 2544 4356 251 27 46 chr20 15186643 15186964 -56966918 + L1PA15-16 LINE L1 2160 2486 -4363 2304 105 3 3 chr20 15186964 15187270 -56966612 - AluSp SINE Alu -7 306 1 4356 251 27 46 chr20 15187270 15187602 -56966280 + L1PA15-16 LINE L1 2486 2853 -3996 6249 198 13 44 chr20 15187604 15189545 -56964337 + L1M1 LINE L1 3618 5489 -689 812 229 45 76 chr20 15189515 15190074 -56963808 - L1MC/D LINE L1 -625 5617 5077 * 285 235 0 24 chr20 15190158 15190243 -56963639 + (TA)n Simple_repeat Simple_repeat 1 83 0 2262 101 0 0 chr20 15190385 15190673 -56963209 - AluSg SINE Alu -22 288 1 21 0 0 0 chr20 15190836 15190857 -56963025 + AT_rich Low_complexity Low_complexity 1 21 0 719 285 111 89 chr20 15190956 15191946 -56961936 + L1M4 LINE L1 3733 4744 -1402 2263 229 38 10 chr20 15191986 15192840 -56961042 + L1MB5 LINE L1 2429 3393 -2753 7647 22 2 0 chr20 15192863 15194040 -56959842 + L1PA3 LINE L1 4975 6153 -2 2585 216 34 26 chr20 15194070 15194944 -56958938 + L1MB5 LINE L1 5127 6010 -164 462 233 10 0 chr20 15195384 15195487 -56958395 + LTR16A1 LTR ERVL 336 439 -18 606 314 25 63 chr20 15196936 15197299 -56956583 + L2 LINE L2 2896 3244 -69 720 307 61 16 chr20 15197367 15197742 -56956140 + LTR16A LTR ERVL 57 448 -2 941 267 105 45 chr20 15197911 15198507 -56955375 - L2 LINE L2 -5 3308 2678 507 270 169 0 chr20 15198669 15198847 -56955035 - MIR SINE MIR -6 256 49 301 58 39 0 chr20 15198864 15198916 -56954966 + (TA)n Simple_repeat Simple_repeat 2 55 0 2067 117 0 0 chr20 15198916 15199198 -56954684 - AluSx SINE Alu -26 286 5 277 227 76 0 chr20 15199344 15199410 -56954472 - MIR SINE MIR -80 182 112 341 284 0 0 chr20 15199415 15199496 -56954386 + MER5A DNA MER1_type 6 86 -103 241 229 110 37 chr20 15199606 15199715 -56954167 - MLT1I LTR MaLR -272 137 21 1217 233 86 24 chr20 15200125 15200580 -56953302 - L1ME3A LINE L1 -106 6064 5582 703 239 46 9 chr20 15201768 15201986 -56951896 - LTR33 LTR ERVL -7 514 289 390 194 59 49 chr20 15203151 15203324 -56950558 - MER34 LTR ERV1 0 542 450 216 0 0 0 chr20 15204632 15204656 -56949226 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 486 205 138 20 chr20 15205003 15205198 -56948684 - LTR48 LTR ERV1 -410 377 160 232 244 73 49 chr20 15205229 15205311 -56948571 - MER34 LTR ERV1 -458 84 1 2223 125 0 3 chr20 15205349 15205662 -56948220 + AluSx SINE Alu 1 312 0 1741 166 61 0 chr20 15205722 15206000 -56947882 + AluSq SINE Alu 1 295 -18 558 284 91 17 chr20 15206762 15206938 -56946944 - MER5A DNA MER1_type 0 189 1 277 194 45 15 chr20 15206960 15207027 -56946855 + MER5A DNA MER1_type 115 183 -6 630 237 23 23 chr20 15207041 15207218 -56946664 - MER5B DNA MER1_type 0 178 2 413 294 111 13 chr20 15208033 15208186 -56945696 + MIR3 SINE MIR 23 190 -18 2379 68 0 0 chr20 15208233 15208525 -56945357 - AluY SINE Alu -19 292 1 417 283 184 7 chr20 15209435 15209587 -56944295 - MER5A DNA MER1_type -2 187 9 248 274 108 10 chr20 15210884 15210986 -56942896 + MIR3 SINE MIR 87 198 -10 463 312 69 30 chr20 15211395 15211597 -56942285 - MER63A DNA MER1_type 0 210 1 40 0 0 0 chr20 15211759 15211799 -56942083 + AT_rich Low_complexity Low_complexity 1 40 0 266 125 54 18 chr20 15211994 15212050 -56941832 - L1ME LINE L1 -377 5744 5687 1249 196 57 99 chr20 15213083 15213506 -56940376 - MER21B LTR ERV1 -51 812 416 524 271 43 0 chr20 15213559 15213699 -56940183 - MER21B LTR ERV1 -615 248 103 424 237 21 11 chr20 15213745 15213838 -56940044 - MER21B LTR ERV1 -769 94 1 419 287 49 0 chr20 15213998 15214120 -56939762 - LTR16C LTR ERVL -5 486 359 785 217 32 18 chr20 15214151 15214368 -56939514 - MER96B DNA MER1_type? -1 416 197 225 149 21 21 chr20 15214637 15214684 -56939198 + MER96B DNA MER1_type? 193 239 -178 683 199 8 15 chr20 15214978 15215109 -56938773 + FLAM_C SINE Alu 2 131 -2 205 281 67 11 chr20 15215689 15215778 -56938104 - L2 LINE L2 -638 2676 2583 1978 219 24 13 chr20 15216032 15216494 -56937388 + MLT1C LTR MaLR 1 467 0 211 97 83 28 chr20 15217233 15217305 -56936577 + (TA)n Simple_repeat Simple_repeat 2 77 0 330 170 44 13 chr20 15217349 15217508 -56936374 + (TA)n Simple_repeat Simple_repeat 2 165 0 374 185 40 35 chr20 15217531 15217704 -56936178 + (TTATA)n Simple_repeat Simple_repeat 5 178 0 * 400 151 90 12 chr20 15217590 15217756 -56936126 + (TA)n Simple_repeat Simple_repeat 2 180 0 700 206 49 80 chr20 15218138 15218597 -56935285 + MLT1F1 LTR MaLR 11 562 -5 655 262 45 49 chr20 15220161 15220405 -56933477 - MIR SINE MIR 0 262 20 256 349 33 7 chr20 15220438 15220590 -56933292 - LTR16C LTR ERVL -30 461 306 1373 239 16 16 chr20 15221251 15221814 -56932068 - LTR40a LTR ERVL -2 517 12 315 244 35 0 chr20 15222100 15222186 -56931696 + (TGGA)n Simple_repeat Simple_repeat 1 89 0 293 337 0 6 chr20 15222199 15222371 -56931511 + GA-rich Low_complexity Low_complexity 2 172 0 205 311 31 19 chr20 15222309 15222470 -56931412 + (TAGA)n Simple_repeat Simple_repeat 2 164 0 * 411 296 153 25 chr20 15222489 15222685 -56931197 + MIR SINE MIR 16 236 -26 1544 174 13 74 chr20 15223795 15224106 -56929776 - AluJo SINE Alu -20 292 1 220 313 0 15 chr20 15224293 15224360 -56929522 - L2 LINE L2 0 3313 3248 286 342 26 9 chr20 15224743 15224857 -56929025 - MIR SINE MIR -68 140 25 611 280 104 36 chr20 15224970 15225249 -56928633 - MLT1I LTR MaLR -13 396 99 208 225 0 0 chr20 15225340 15225380 -56928502 - L2 LINE L2 -2 3270 3231 438 274 21 42 chr20 15225610 15225800 -56928082 - MLT1H LTR MaLR -292 257 72 742 200 8 0 chr20 15225970 15226095 -56927787 + AluJo/FLAM SINE Alu 1 126 -176 2289 72 21 14 chr20 15226098 15226389 -56927493 - AluY SINE Alu -18 293 1 2870 293 110 45 chr20 15226406 15227058 -56926824 - L2 LINE L2 -189 3124 2515 1994 113 18 0 chr20 15227058 15227368 -56926514 + AluSc SINE Alu 1 315 0 2870 293 110 45 chr20 15227368 15228246 -56925636 - L2 LINE L2 -798 2515 1479 5093 141 35 8 chr20 15228246 15229121 -56924761 - MER4D LTR ERV1 -3 900 2 2870 293 110 45 chr20 15229121 15229220 -56924662 - L2 LINE L2 -1834 1479 1388 22 56 0 0 chr20 15230133 15230169 -56923713 + AT_rich Low_complexity Low_complexity 1 36 0 1416 265 103 11 chr20 15230533 15230997 -56922885 - MLT1H LTR MaLR -2 547 41 216 0 0 0 chr20 15231272 15231296 -56922586 + (CAAAA)n Simple_repeat Simple_repeat 4 27 0 672 233 186 12 chr20 15232307 15232560 -56921322 + LTR16A1 LTR ERVL 160 456 -1 397 215 88 26 chr20 15232606 15232759 -56921123 - MLT1J2 LTR MaLR -29 471 273 406 218 105 24 chr20 15232805 15232929 -56920953 - MLT1J2 LTR MaLR -276 174 41 900 167 11 11 chr20 15233793 15233967 -56919915 + MLT1A1 LTR MaLR 15 188 -177 853 254 15 0 chr20 15234029 15234230 -56919652 + MLT1A1 LTR MaLR 162 365 0 416 332 64 33 chr20 15234287 15234648 -56919234 + LTR16A LTR ERVL 3 374 -76 262 191 0 0 chr20 15235088 15235135 -56918747 + (TG)n Simple_repeat Simple_repeat 1 47 0 216 0 0 0 chr20 15236272 15236296 -56917586 + (TTTTTG)n Simple_repeat Simple_repeat 4 27 0 205 333 95 0 chr20 15236389 15236494 -56917388 + L2 LINE L2 3157 3271 -1 1294 261 46 13 chr20 15237200 15237653 -56916229 + Charlie4a DNA MER1_type 36 503 -5 264 20 20 59 chr20 15238296 15238347 -56915535 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 1191 219 48 37 chr20 15239637 15240236 -56913646 + MLT1E1 LTR MaLR 1 654 0 1500 230 54 19 chr20 15240247 15240686 -56913196 - Charlie4a DNA MER1_type -1457 504 45 240 35 0 0 chr20 15240686 15240715 -56913167 + (TTCA)n Simple_repeat Simple_repeat 2 30 0 1500 230 54 19 chr20 15240715 15240758 -56913124 - Charlie4a DNA MER1_type -1916 45 5 313 220 53 38 chr20 15241425 15241557 -56912325 - HAL1 LINE L1 -145 2362 2229 256 268 0 2 chr20 15242098 15242157 -56911725 + MER5B DNA MER1_type 66 118 -60 356 237 23 23 chr20 15243907 15244038 -56909844 + MLT1I LTR MaLR 10 140 -269 1795 173 3 3 chr20 15245608 15245921 -56907961 - AluJb SINE Alu 0 313 1 269 155 0 17 chr20 15246043 15246101 -56907781 - MER116 DNA Mariner -15 65 9 25978 83 6 3 chr20 15246147 15250714 -56903168 - L1PA7 LINE L1 -1 6153 1581 449 263 40 51 chr20 15251308 15251392 -56902490 - MIR SINE MIR -43 219 136 2549 123 3 3 chr20 15251392 15251767 -56902115 + THE1C LTR MaLR 1 375 0 449 263 40 51 chr20 15251767 15251857 -56902025 - MIR SINE MIR -126 136 47 1140 187 83 57 chr20 15252380 15252647 -56901235 - Charlie1 DNA MER1_type -24 2737 2455 1608 176 9 47 chr20 15252647 15252966 -56900916 + AluJo SINE Alu 1 307 -5 1140 187 83 57 chr20 15252966 15253083 -56900799 - Charlie1 DNA MER1_type -306 2455 2343 279 0 0 0 chr20 15253149 15253180 -56900702 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2268 173 37 22 chr20 15253191 15253703 -56900179 + LTR27 LTR ERV1 2 490 -11 385 161 69 0 chr20 15254388 15254475 -56899407 - L1MB7 LINE L1 -9 6175 6083 276 30 0 0 chr20 15254964 15254997 -56898885 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 2107 150 0 0 chr20 15255037 15255343 -56898539 - AluSx SINE Alu -6 306 1 250 333 79 30 chr20 15257075 15257240 -56896642 - L2 LINE L2 -20 3293 3121 952 224 246 29 chr20 15258021 15258436 -56895446 + MLT1D LTR MaLR 1 505 0 213 65 0 0 chr20 15260142 15260173 -56893709 + (T)n Simple_repeat Simple_repeat 1 31 0 461 266 140 0 chr20 15261813 15261956 -56891926 + MER5B DNA MER1_type 8 170 -8 625 281 180 32 chr20 15262046 15262207 -56891675 + MLT1H1 LTR MaLR 49 185 -370 1683 179 0 24 chr20 15262207 15262503 -56891379 + AluJo SINE Alu 5 293 -19 625 281 180 32 chr20 15262503 15262775 -56891107 + MLT1H1 LTR MaLR 185 546 -9 1907 231 62 21 chr20 15262844 15263359 -56890523 + MLT1F LTR MaLR 7 542 0 1008 230 99 107 chr20 15264134 15264712 -56889170 - L1MC5 LINE L1 -36 7925 7344 467 179 0 0 chr20 15264712 15264807 -56889075 - L1PA8 LINE L1 -4 6168 6074 1650 143 73 33 chr20 15264815 15265115 -56888767 - AluSx SINE Alu 0 312 1 1008 230 99 107 chr20 15265115 15265650 -56888232 - L1MC5 LINE L1 -624 7337 6815 687 256 77 4 chr20 15265660 15265855 -56888027 - L1MD2 LINE L1 -13 6346 6128 315 0 0 0 chr20 15265855 15265890 -56887992 + (TG)n Simple_repeat Simple_repeat 2 36 0 687 256 77 4 chr20 15265890 15265940 -56887942 - L1MD2 LINE L1 -231 6128 6083 505 253 0 118 chr20 15265940 15266169 -56887713 - L1MC5 LINE L1 -1124 6837 6636 237 33 0 0 chr20 15266556 15266586 -56887296 + (T)n Simple_repeat Simple_repeat 1 30 0 42085 37 25 2 chr20 15266600 15272610 -56881272 - L1PA3 LINE L1 0 6155 1 2001 137 64 14 chr20 15272733 15273077 -56880805 + THE1B LTR MaLR 1 361 -3 11305 99 6 11 chr20 15273077 15273563 -56880319 + THE1B-int LTR MaLR 10 497 -1083 2787 19 0 3 chr20 15273563 15273873 -56880009 + AluYa5 SINE Alu 1 309 -2 11305 99 6 11 chr20 15273873 15274966 -56878916 + THE1B-int LTR MaLR 497 1580 0 2060 148 45 28 chr20 15274966 15275324 -56878558 + THE1B LTR MaLR 1 364 0 210 208 0 0 chr20 15275426 15275479 -56878403 + (TA)n Simple_repeat Simple_repeat 1 53 0 180 0 0 0 chr20 15276158 15276178 -56877704 + (T)n Simple_repeat Simple_repeat 1 20 0 22 0 0 0 chr20 15276443 15276465 -56877417 + AT_rich Low_complexity Low_complexity 1 22 0 510 315 93 42 chr20 15276568 15277073 -56876809 + L1M4 LINE L1 3107 3637 -2509 760 272 40 72 chr20 15277297 15277778 -56876104 + L2 LINE L2 2769 3309 -4 549 256 52 70 chr20 15277792 15278120 -56875762 - HAL1 LINE L1 -1228 1279 958 23 33 0 0 chr20 15278306 15278336 -56875546 + AT_rich Low_complexity Low_complexity 1 30 0 246 128 0 0 chr20 15280492 15280531 -56873351 + (TAGA)n Simple_repeat Simple_repeat 3 41 0 1576 223 87 11 chr20 15284135 15284766 -56869116 - L1P5 LINE L1 -629 5522 4849 4168 148 41 56 chr20 15284775 15285657 -56868225 + L1MA10 LINE L1 5462 6330 -4 2209 293 157 23 chr20 15285659 15287118 -56866764 - L2 LINE L2 -19 3294 1640 963 244 102 68 chr20 15287613 15287966 -56865916 - LTR16A1 LTR ERVL -92 365 1 232 313 154 2 chr20 15288581 15288725 -56865157 + MIR SINE MIR 15 179 -29 3417 193 4 8 chr20 15288776 15289495 -56864387 - L1 LINE L1 -1052 5094 4379 * 4497 176 30 13 chr20 15289488 15290442 -56863440 + L1PB4 LINE L1 5213 6156 0 192 163 0 0 chr20 15290693 15290736 -56863146 + A-rich Low_complexity Low_complexity 1 43 0 327 299 153 0 chr20 15291988 15292145 -56861737 + LTR16C LTR ERVL 311 491 0 348 295 154 32 chr20 15292809 15292848 -56861034 + MER5A DNA MER1_type 9 42 -147 2213 105 3 0 chr20 15292848 15293134 -56860748 - AluSx SINE Alu -23 289 3 348 295 154 32 chr20 15293134 15293250 -56860632 + MER5A DNA MER1_type 42 183 -6 252 301 20 111 chr20 15293287 15293392 -56860490 + L2 LINE L2 2146 2226 -1088 2347 106 0 0 chr20 15293392 15293704 -56860178 + AluSx SINE Alu 1 312 0 252 301 20 111 chr20 15293704 15293797 -56860085 + L2 LINE L2 2226 2326 -988 855 339 55 18 chr20 15294083 15294517 -56859365 + LTR16A LTR ERVL 1 450 0 249 289 167 34 chr20 15294520 15294759 -56859123 + L2 LINE L2 2380 2650 -664 4310 197 93 45 chr20 15295859 15297028 -56856854 - L1MC3 LINE L1 -23 8042 6818 2645 189 38 1 chr20 15297018 15297801 -56856081 - L1MC3 LINE L1 -743 5683 5272 * 3575 224 56 13 chr20 15297798 15299279 -56854603 - L1MB8 LINE L1 0 6178 4642 2089 245 146 29 chr20 15299278 15299823 -56854059 - L1MC3 LINE L1 -1139 5287 4807 * 2595 68 0 0 chr20 15299823 15300132 -56853750 - AluY SINE Alu 0 311 3 2089 245 146 29 chr20 15300132 15300524 -56853358 - L1MC3 LINE L1 -1619 4807 4240 307 204 54 21 chr20 15300521 15300614 -56853268 - L1MC3 LINE L1 -4272 2154 2059 * 1292 162 40 27 chr20 15300586 15300907 -56852975 - L1MC3 LINE L1 -4418 2008 1718 22531 46 3 9 chr20 15300978 15304592 -56849290 + L1PA5 LINE L1 2547 6150 -4 1614 265 40 15 chr20 15304902 15305284 -56848598 + MER110 LTR ERV1 1 399 -92 2246 143 94 8 chr20 15305284 15305676 -56848206 + MSTB LTR MaLR 1 426 0 1614 265 40 15 chr20 15305676 15305772 -56848110 + MER110 LTR ERV1 399 491 0 2297 75 0 26 chr20 15305879 15306186 -56847696 + AluY SINE Alu 1 299 -12 316 265 99 76 chr20 15307582 15307754 -56846128 + L2 LINE L2 2906 3073 -240 1736 134 56 54 chr20 15307754 15308127 -56845755 + THE1C LTR MaLR 2 375 0 316 265 99 76 chr20 15308127 15308297 -56845585 + L2 LINE L2 3073 3256 -57 601 133 25 0 chr20 15309053 15309173 -56844709 + (TCTA)n Simple_repeat Simple_repeat 2 124 0 1704 246 89 13 chr20 15309272 15309813 -56844069 + L1MD3 LINE L1 7404 7985 -10 606 270 80 48 chr20 15309886 15310215 -56843667 - MLT1H LTR MaLR -202 393 41 1081 184 32 9 chr20 15310215 15310432 -56843450 - MLT1A1 LTR MaLR 0 365 144 6895 14 0 0 chr20 15310451 15311235 -56842647 - L1PA3 LINE L1 0 6155 5372 674 217 19 31 chr20 15311235 15311396 -56842486 - MLT1A1 LTR MaLR -206 159 1 206 231 15 0 chr20 15313525 15313590 -56840292 + GA-rich Low_complexity Low_complexity 1 66 0 380 317 22 54 chr20 15313642 15313866 -56840016 - MLT1J2 LTR MaLR -125 325 109 1533 227 119 45 chr20 15313867 15314356 -56839526 + MLT1F LTR MaLR 16 540 -2 382 216 49 10 chr20 15314358 15314460 -56839422 - MLT1J2 LTR MaLR -344 106 1 34482 50 4 2 chr20 15315094 15321212 -56832670 + L1PA5 LINE L1 11 6148 -6 22 0 0 0 chr20 15321427 15321449 -56832433 + AT_rich Low_complexity Low_complexity 1 22 0 1452 254 55 25 chr20 15321466 15321899 -56831983 + LTR16A1 LTR ERVL 1 446 -11 336 185 0 0 chr20 15322707 15322772 -56831110 - L2 LINE L2 -6 3266 3202 284 333 91 16 chr20 15323795 15323981 -56829901 - MIR SINE MIR -58 204 5 23 54 0 0 chr20 15324005 15324042 -56829840 + AT_rich Low_complexity Low_complexity 1 37 0 315 358 69 35 chr20 15325166 15325339 -56828543 + L1ME3A LINE L1 5963 6141 -29 373 257 33 53 chr20 15326745 15326897 -56826985 + MIR SINE MIR 113 261 -1 518 311 16 55 chr20 15328577 15328760 -56825122 - MER5A DNA MER1_type 0 189 14 224 266 152 0 chr20 15329385 15329464 -56824418 + MIR SINE MIR 94 184 -78 294 283 121 10 chr20 15329941 15330040 -56823842 + MIR SINE MIR 1 110 -152 486 0 0 0 chr20 15330049 15330103 -56823779 + (CA)n Simple_repeat Simple_repeat 2 55 0 231 260 0 0 chr20 15330458 15330508 -56823374 + L2 LINE L2 3221 3270 -2 213 387 57 16 chr20 15330979 15331103 -56822779 - L2 LINE L2 -23 3249 3121 265 327 120 27 chr20 15331396 15331546 -56822336 + MIR SINE MIR 20 183 -79 3530 82 2 0 chr20 15333688 15334140 -56819742 + MLT2A2 LTR ERVL 1 453 0 1659 304 140 10 chr20 15335189 15336135 -56817747 + L2 LINE L2 1988 3107 -206 1851 180 47 38 chr20 15336135 15336557 -56817325 - MSTB LTR MaLR 0 426 1 1659 304 140 10 chr20 15336557 15336774 -56817108 + L2 LINE L2 3107 3294 -19 1874 114 84 0 chr20 15336786 15337059 -56816823 - AluSq SINE Alu -17 296 1 242 203 29 87 chr20 15337168 15337237 -56816645 + MER5A DNA MER1_type 41 105 -84 1066 252 76 60 chr20 15338089 15338486 -56815396 - LTR16A1 LTR ERVL 0 457 55 21 36 0 0 chr20 15338565 15338593 -56815289 + AT_rich Low_complexity Low_complexity 1 28 0 510 285 95 15 chr20 15338603 15338777 -56815105 - MIR SINE MIR -41 221 28 2532 48 0 10 chr20 15338777 15339088 -56814794 - AluY SINE Alu -3 308 1 510 285 95 15 chr20 15339088 15339113 -56814769 - MIR SINE MIR -234 28 6 1428 291 60 29 chr20 15339281 15339797 -56814085 - MLT1H LTR MaLR 0 549 18 575 302 66 61 chr20 15340207 15340816 -56813066 - L1MC4a LINE L1 -1896 5912 5301 21 0 0 0 chr20 15340843 15340864 -56813018 + AT_rich Low_complexity Low_complexity 1 21 0 326 285 1 3 chr20 15340892 15341014 -56812868 - L1ME2 LINE L1 0 6170 6049 303 244 126 8 chr20 15341031 15341150 -56812732 - L1MC4a LINE L1 -1139 5007 4875 268 253 22 66 chr20 15341151 15341242 -56812640 - L1ME3 LINE L1 -114 6048 5962 1445 227 105 31 chr20 15341246 15342012 -56811870 - L1ME3 LINE L1 -256 5906 5078 284 241 222 0 chr20 15342017 15342125 -56811757 - L1ME3 LINE L1 -1139 5007 4876 1228 256 43 5 chr20 15342131 15342569 -56811313 - L1ME3 LINE L1 -1320 4826 4372 537 274 128 10 chr20 15342588 15342894 -56810988 - L1ME3 LINE L1 -2168 3978 3637 21 36 0 0 chr20 15342966 15342994 -56810888 + AT_rich Low_complexity Low_complexity 1 28 0 1769 69 0 26 chr20 15343336 15343568 -56810314 + AluY SINE Alu 83 308 -3 767 226 0 26 chr20 15343700 15343855 -56810027 - AluJo SINE Alu -161 151 1 876 298 102 28 chr20 15344096 15344840 -56809042 + HAL1b LINE L1 430 1228 -120 359 278 76 21 chr20 15344844 15344988 -56808894 + HAL1b LINE L1 1187 1338 -10 332 309 120 5 chr20 15345321 15345538 -56808344 + L1ME LINE L1 5545 5786 -335 250 378 65 5 chr20 15345545 15345730 -56808152 - MIR SINE MIR -13 249 54 310 234 145 20 chr20 15345813 15346061 -56807821 - L1ME4a LINE L1 -33 6088 5810 345 276 98 6 chr20 15346132 15346306 -56807576 - L1ME4a LINE L1 -406 5715 5526 465 270 7 13 chr20 15346488 15346640 -56807242 + L1ME3 LINE L1 4864 5014 -1132 2803 206 67 21 chr20 15346698 15346762 -56807120 - L1MB8 LINE L1 -14 6164 6104 412 175 0 0 chr20 15346762 15346842 -56807040 + MADE1 DNA Mariner 1 80 0 2803 206 67 21 chr20 15346842 15347504 -56806378 - L1MB8 LINE L1 -74 6104 5404 709 241 70 51 chr20 15347504 15347760 -56806122 + MSTD LTR MaLR 1 263 -163 633 237 76 50 chr20 15347762 15347905 -56805977 + MSTD LTR MaLR 194 345 -51 2384 140 29 17 chr20 15347905 15348326 -56805556 + MSTB LTR MaLR 1 426 0 633 237 76 50 chr20 15348326 15348380 -56805502 + MSTD LTR MaLR 345 396 0 1071 309 15 2 chr20 15348418 15348813 -56805069 + L1ME3 LINE L1 5755 6154 -8 601 202 0 0 chr20 15349589 15349698 -56804184 - LTR16A1 LTR ERVL 0 457 349 2060 196 22 51 chr20 15349801 15350292 -56803590 + MER31A LTR ERV1 1 477 -8 303 292 26 18 chr20 15350311 15350424 -56803458 - LTR16A1 LTR ERVL -337 120 7 230 216 124 31 chr20 15350495 15350592 -56803290 + MER113 DNA MER1_type? 9 114 -407 1178 235 106 21 chr20 15351186 15351836 -56802046 + L1ME LINE L1 4742 5459 -707 339 374 42 21 chr20 15353301 15353590 -56800292 - L2 LINE L2 -429 2885 2591 469 288 72 40 chr20 15354275 15354497 -56799385 - LTR16A1 LTR ERVL -21 436 208 217 265 36 36 chr20 15355346 15355429 -56798453 - MIR3 SINE MIR -3 205 123 541 244 65 55 chr20 15355735 15355936 -56797946 + MIR SINE MIR 59 261 -1 4114 205 22 2 chr20 15355971 15356836 -56797046 - L1MB7 LINE L1 -27 6157 5276 22 0 0 0 chr20 15356842 15356864 -56797018 + AT_rich Low_complexity Low_complexity 1 22 0 325 299 24 43 chr20 15356864 15357028 -56796854 - L2 LINE L2 -37 3276 3116 455 353 62 24 chr20 15358125 15358417 -56795465 - L2 LINE L2 -6 3307 3005 1094 166 5 0 chr20 15358584 15358783 -56795099 + L1PBa LINE L1 1 200 -6663 9893 180 41 25 chr20 15358783 15362087 -56791795 + L1PBa LINE L1 634 4099 -2763 11446 50 3 5 chr20 15362088 15363545 -56790337 - L1P LINE L1 -4075 2071 617 711 47 0 0 chr20 15363539 15363625 -56790257 - L1P LINE L1 -6048 98 13 * 257 348 15 45 chr20 15363682 15363883 -56789999 + L2 LINE L2 3090 3284 -29 1028 304 78 6 chr20 15363901 15364259 -56789623 - LTR16C LTR ERVL -34 457 74 1062 284 77 17 chr20 15365309 15365777 -56788105 - L1MC4 LINE L1 -9 8033 7538 192 77 0 0 chr20 15365779 15365805 -56788077 + (TTGG)n Simple_repeat Simple_repeat 2 27 0 530 340 21 71 chr20 15366510 15366848 -56787034 - L2 LINE L2 -37 3235 2915 278 281 50 50 chr20 15366881 15367002 -56786880 - MLT1H LTR MaLR 0 549 429 349 239 0 58 chr20 15367795 15367909 -56785973 + MER5A DNA MER1_type 4 109 -80 2356 117 8 8 chr20 15368436 15368787 -56785095 - THE1A LTR MaLR 0 355 5 2174 128 0 0 chr20 15368814 15369119 -56784763 + AluSq SINE Alu 1 305 -8 471 299 0 15 chr20 15369305 15369442 -56784440 + MIR SINE MIR 12 146 -116 277 259 138 26 chr20 15369659 15369886 -56783996 + MLT1G1 LTR MaLR 282 595 0 709 331 38 31 chr20 15370080 15370688 -56783194 - L1MC4a LINE L1 -1925 5883 5272 3997 68 4 0 chr20 15370694 15371212 -56782670 - L1PA8 LINE L1 -11 6161 5642 696 176 99 0 chr20 15371434 15371576 -56782306 - L1PB4 LINE L1 0 6156 6001 354 269 62 7 chr20 15372017 15372162 -56781720 - MARNA DNA Mariner -189 397 245 241 330 11 0 chr20 15372352 15372443 -56781439 + MARNA DNA Mariner 456 547 -39 784 259 35 0 chr20 15372959 15373133 -56780749 + MER5A DNA MER1_type 10 189 0 209 296 28 14 chr20 15373360 15373431 -56780451 - L2 LINE L2 -8 3305 3234 1388 213 45 14 chr20 15373434 15373791 -56780091 - MER39 LTR ERV1 0 707 340 474 233 82 9 chr20 15373849 15374021 -56779861 - MER39 LTR ERV1 -503 155 6 209 375 12 12 chr20 15374026 15374106 -56779776 - L2 LINE L2 -88 3184 3105 235 0 28 28 chr20 15376496 15376532 -56777350 + (CAAAAA)n Simple_repeat Simple_repeat 3 38 0 253 312 0 26 chr20 15376607 15376684 -56777198 + CT-rich Low_complexity Low_complexity 3 77 0 2135 190 12 5 chr20 15377136 15377552 -56776330 + L1PB3 LINE L1 5729 6147 -7 222 174 0 0 chr20 15377552 15377598 -56776284 + (TA)n Simple_repeat Simple_repeat 1 46 0 2255 183 24 2 chr20 15378498 15378907 -56774975 - MER47B DNA MER2_type 0 418 1 237 384 13 21 chr20 15378921 15379068 -56774814 + MIR SINE MIR 3 139 -69 783 285 26 33 chr20 15379264 15379569 -56774313 + LTR16C LTR ERVL 83 385 -106 2526 122 23 50 chr20 15379704 15380140 -56773742 - MSTC LTR MaLR -4 424 1 474 65 0 0 chr20 15380799 15380861 -56773021 + (TCCA)n Simple_repeat Simple_repeat 3 64 0 208 366 0 15 chr20 15380864 15380998 -56772884 + CT-rich Low_complexity Low_complexity 3 134 0 594 297 56 36 chr20 15381093 15381342 -56772540 + MIR SINE MIR 9 262 0 271 211 78 84 chr20 15382262 15382404 -56771478 - MLT1J2 LTR MaLR -44 406 266 239 358 119 24 chr20 15383624 15383917 -56769965 - L2 LINE L2 -5 3308 2988 496 313 28 22 chr20 15384900 15385079 -56768803 + MIR3 SINE MIR 25 204 -4 231 114 0 0 chr20 15385291 15385326 -56768556 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 393 234 158 38 chr20 15386114 15386272 -56767610 + MER5B DNA MER1_type 2 178 0 1370 113 38 13 chr20 15386381 15386619 -56767263 - L1MA5A LINE L1 -10 6287 6044 194 338 149 14 chr20 15386781 15386929 -56766953 - MIR SINE MIR -74 188 21 478 330 93 56 chr20 15387989 15388234 -56765648 + L3 LINE CR1 733 967 -610 1102 259 56 29 chr20 15388234 15388678 -56765204 + LTR16A1 LTR ERVL 1 456 -1 478 330 93 56 chr20 15388678 15389077 -56764805 + L3 LINE CR1 967 1401 -176 238 292 15 0 chr20 15389352 15389417 -56764465 - L2 LINE L2 0 3313 3248 263 0 81 0 chr20 15389428 15389465 -56764417 + T-rich Low_complexity Low_complexity 2 41 0 183 271 42 42 chr20 15389803 15389851 -56764031 - L2 LINE L2 -69 3203 3156 1692 157 16 33 chr20 15389909 15390214 -56763668 - AluJo SINE Alu -12 300 1 10194 26 0 0 chr20 15390359 15392331 -56761551 - L1PA2 LINE L1 -7 6148 4177 2020 121 3 30 chr20 15392357 15392662 -56761220 + AluSg SINE Alu 1 297 -13 524 192 0 8 chr20 15392916 15393036 -56760846 + GA-rich Low_complexity Low_complexity 2 120 0 2251 116 0 10 chr20 15393870 15394180 -56759702 + AluSx SINE Alu 1 307 -5 331 283 91 63 chr20 15395652 15396088 -56757794 + MLT1H LTR MaLR 3 548 -1 589 317 44 19 chr20 15396383 15396702 -56757180 + L1M3c LINE L1 1356 1682 -5814 296 295 63 32 chr20 15397077 15397267 -56756615 + L1M3c LINE L1 2011 2206 -5360 1642 163 41 7 chr20 15397297 15397567 -56756315 + AluJb SINE Alu 2 280 -32 207 0 0 0 chr20 15397568 15397591 -56756291 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 621 228 6 41 chr20 15397591 15397762 -56756120 + L1M3c LINE L1 2804 2968 -4598 8133 220 35 32 chr20 15397886 15401139 -56752743 + L1MA9 LINE L1 2647 5916 -1649 1084 167 81 25 chr20 15401141 15401262 -56752620 + AluJb SINE Alu 1 139 -173 203 77 0 26 chr20 15401262 15401301 -56752581 + (CAAAA)n Simple_repeat Simple_repeat 2 39 0 1084 167 81 25 chr20 15401301 15401377 -56752505 + AluJb SINE Alu 139 209 -103 2581 190 30 36 chr20 15401383 15402019 -56751863 + L1MA9 LINE L1 7096 7727 -4 637 203 98 0 chr20 15403062 15403120 -56750762 + LTR47A LTR ERVL 274 325 -127 182 31 0 62 chr20 15403120 15403152 -56750730 + (TTA)n Simple_repeat Simple_repeat 3 32 0 1494 219 0 0 chr20 15403152 15403444 -56750438 - L1PB4 LINE L1 -15 6141 5850 637 203 98 0 chr20 15403444 15403547 -56750335 + LTR47A LTR ERVL 324 452 0 243 194 16 48 chr20 15403903 15403965 -56749917 + MIR SINE MIR 92 151 -57 2647 51 0 6 chr20 15404892 15405205 -56748677 - AluY SINE Alu 0 311 1 4658 123 17 13 chr20 15405942 15406722 -56747160 - L1MA4A LINE L1 -5 6298 5516 1340 237 27 22 chr20 15406722 15407131 -56746751 - L1 LINE L1 -3153 3695 3285 * 8251 177 38 155 chr20 15407107 15409153 -56744729 - L1 LINE L1 -4044 2805 1249 264 30 0 0 chr20 15409153 15409186 -56744696 + (TG)n Simple_repeat Simple_repeat 2 34 0 8251 177 38 155 chr20 15409186 15410269 -56743613 - L1 LINE L1 -5600 1249 41 195 42 0 0 chr20 15410776 15410800 -56743082 + (TAAA)n Simple_repeat Simple_repeat 4 27 0 1126 253 107 53 chr20 15410941 15411466 -56742416 - MER119 DNA MER1_type -1 582 30 463 252 139 54 chr20 15411508 15411766 -56742116 + L1ME3A LINE L1 1063 1342 -4863 379 356 28 36 chr20 15411851 15412104 -56741778 + L1ME3A LINE L1 1491 1741 -4655 2294 128 27 3 chr20 15412203 15412569 -56741313 + THE1C LTR MaLR 1 375 0 536 333 36 9 chr20 15412837 15413287 -56740595 + L1ME3A LINE L1 3924 4385 -1830 241 267 53 90 chr20 15413336 15413585 -56740297 + L1ME3A LINE L1 4392 4614 -1601 849 247 18 35 chr20 15413585 15413812 -56740070 - MER58A DNA MER1_type 0 224 2 241 267 53 90 chr20 15413812 15414086 -56739796 + L1ME3A LINE L1 4614 4896 -1319 465 327 51 19 chr20 15414479 15415139 -56738743 + L1ME3A LINE L1 5327 6016 -223 439 241 63 115 chr20 15415801 15415975 -56737907 + MER5B DNA MER1_type 13 177 -1 466 268 20 26 chr20 15417006 15417159 -56736723 - LTR16C LTR ERVL 0 491 340 612 199 7 7 chr20 15417161 15417302 -56736580 + L1MB8 LINE L1 6032 6172 -6 509 279 89 30 chr20 15417337 15417574 -56736308 - LTR16C LTR ERVL -156 335 85 390 232 111 44 chr20 15417746 15418050 -56735832 - LTR49 LTR ERV1 0 595 271 894 183 139 0 chr20 15418070 15418272 -56735610 - MER34C LTR ERV1 -352 233 4 222 265 0 44 chr20 15418742 15418878 -56735004 + A-rich Low_complexity Low_complexity 2 131 0 583 319 65 26 chr20 15419726 15420239 -56733643 + L1MC4a LINE L1 2173 2678 -3537 11715 169 15 2 chr20 15420239 15422316 -56731566 + ERVL LTR ERVL 1375 3509 -2255 958 219 50 10 chr20 15422326 15422527 -56731355 + MLT2B3 LTR ERVL 296 504 -50 543 16 0 0 chr20 15422527 15422591 -56731291 + (TCTA)n Simple_repeat Simple_repeat 2 65 0 1922 159 14 0 chr20 15422728 15423011 -56730871 + AluSx SINE Alu 6 292 -20 655 48 73 12 chr20 15423015 15423180 -56730702 + (TA)n Simple_repeat Simple_repeat 1 175 0 723 331 96 47 chr20 15423459 15424511 -56729371 + L1MC4a LINE L1 4252 5355 -860 430 258 46 36 chr20 15424513 15424707 -56729175 + L1MC4a LINE L1 5364 5559 -2318 1060 274 71 25 chr20 15424718 15425199 -56728683 + L1MC4a LINE L1 5598 6100 -1777 581 318 88 13 chr20 15425426 15425989 -56727893 + L1MC4a LINE L1 5352 5532 -691 22 0 0 0 chr20 15426191 15426213 -56727669 + AT_rich Low_complexity Low_complexity 1 22 0 934 206 15 5 chr20 15426401 15426600 -56727282 - L1PB4 LINE L1 -8 6148 5948 458 207 279 0 chr20 15426666 15426806 -56727076 - MER5A DNA MER1_type -1 188 10 372 298 16 16 chr20 15427785 15427976 -56725906 + L1ME4a LINE L1 5658 5848 -273 21 0 0 0 chr20 15428031 15428052 -56725830 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr20 15428297 15428318 -56725564 + AT_rich Low_complexity Low_complexity 1 21 0 270 0 0 0 chr20 15428557 15428587 -56725295 + (T)n Simple_repeat Simple_repeat 1 30 0 1453 228 60 36 chr20 15428770 15429218 -56724664 + MLT1C LTR MaLR 9 467 0 471 342 37 25 chr20 15429370 15429724 -56724158 - LTR16C LTR ERVL -35 456 99 270 250 36 54 chr20 15429994 15430162 -56723720 + MLT1K LTR MaLR 389 553 -35 902 181 53 0 chr20 15430191 15430362 -56723520 + MER5A DNA MER1_type 10 189 0 726 197 98 39 chr20 15431308 15431511 -56722371 + MLT1J2 LTR MaLR 48 262 -188 700 254 40 0 chr20 15431539 15431716 -56722166 + MER58A DNA MER1_type 37 220 -4 966 224 18 5 chr20 15433001 15433224 -56720658 - LTR16C LTR ERVL 0 491 266 315 329 44 0 chr20 15433285 15433422 -56720460 - LTR16C LTR ERVL -348 143 1 632 260 29 0 chr20 15434498 15434671 -56719211 - MER5B DNA MER1_type 0 178 1 1020 271 139 33 chr20 15434733 15435158 -56718724 + L2 LINE L2 2320 2789 -525 311 236 91 9 chr20 15435227 15435337 -56718545 + MER103 DNA DNA 17 135 -31 1696 192 48 3 chr20 15435383 15435737 -56718145 + MSTB LTR MaLR 1 370 -56 450 94 0 0 chr20 15435739 15435803 -56718079 + (TTCC)n Simple_repeat Simple_repeat 2 65 0 2177 118 7 0 chr20 15435823 15436111 -56717771 - AluSx SINE Alu -22 290 1 478 97 0 0 chr20 15436111 15436183 -56717699 + MSTB LTR MaLR 355 426 0 2184 71 0 4 chr20 15436492 15436759 -56717123 - AluSq SINE Alu -9 304 39 2501 114 23 46 chr20 15436782 15436969 -56716913 + MSTA LTR MaLR 1 191 -237 2318 92 7 7 chr20 15436969 15437275 -56716607 - AluSg SINE Alu -3 307 2 2501 114 23 46 chr20 15437275 15437525 -56716357 + MSTA LTR MaLR 191 428 0 40688 37 22 1 chr20 15437776 15443800 -56710082 - L1PA2 LINE L1 -1 6154 2 1287 133 0 0 chr20 15445024 15445204 -56708678 - AluSg/x SINE Alu -8 304 125 1605 128 30 40 chr20 15445221 15445348 -56708534 + L1PA16 LINE L1 5872 5999 -167 2317 109 0 0 chr20 15445348 15445652 -56708230 + AluSq SINE Alu 1 304 -9 1605 128 30 40 chr20 15445652 15445822 -56708060 + L1PA16 LINE L1 5999 6166 0 847 310 68 68 chr20 15445837 15446337 -56707545 - L2 LINE L2 -1 3312 2813 324 259 207 22 chr20 15446356 15446491 -56707391 + MER91A DNA MER1_type 15 174 -22 5053 291 106 11 chr20 15446579 15448498 -56705384 - L2 LINE L2 -513 2801 700 5003 169 53 20 chr20 15448568 15449782 -56704100 - L1MC3 LINE L1 0 7785 6476 256 355 0 11 chr20 15449806 15449899 -56703983 + MER20B DNA MER1_type 86 177 -606 283 286 33 0 chr20 15449941 15450032 -56703850 - L2 LINE L2 -2615 699 606 889 310 9 26 chr20 15450103 15450451 -56703431 + MLT1H LTR MaLR 10 351 -198 1604 226 67 36 chr20 15450512 15451055 -56702827 + MLT1F1 LTR MaLR 1 567 0 256 315 11 0 chr20 15451056 15451145 -56702737 + MLT1H LTR MaLR 443 532 -17 271 265 34 86 chr20 15451165 15451282 -56702600 - L2 LINE L2 -2764 550 440 291 54 0 0 chr20 15451751 15451788 -56702094 + (GA)n Simple_repeat Simple_repeat 2 38 0 1283 210 99 55 chr20 15451838 15452272 -56701610 + LTR16A1 LTR ERVL 1 453 -4 318 291 10 10 chr20 15453270 15453373 -56700509 - MIR SINE MIR -71 191 89 25 0 0 0 chr20 15454431 15454456 -56699426 + AT_rich Low_complexity Low_complexity 1 25 0 215 348 71 35 chr20 15454821 15454962 -56698920 + L2 LINE L2 3167 3312 -1 216 219 0 0 chr20 15455572 15455613 -56698269 + (TAA)n Simple_repeat Simple_repeat 1 41 0 244 145 158 26 chr20 15455946 15456022 -56697860 - MER89 LTR ERV1 0 559 474 38 61 0 0 chr20 15456171 15456237 -56697645 + AT_rich Low_complexity Low_complexity 1 66 0 962 212 9 107 chr20 15456582 15457015 -56696867 - MER89 LTR ERV1 -69 490 5 262 167 0 0 chr20 15457396 15457438 -56696444 - tRNA-Asp-GAC tRNA tRNA -33 42 1 441 285 102 7 chr20 15459027 15459164 -56694718 - MER5A DNA MER1_type -30 159 10 246 311 83 44 chr20 15460611 15460791 -56693091 - MIR SINE MIR -8 254 68 409 321 94 6 chr20 15461398 15461557 -56692325 + MIR3 SINE MIR 33 205 -3 267 356 0 0 chr20 15462506 15462621 -56691261 - L1ME LINE L1 -290 5880 5766 568 251 37 37 chr20 15462779 15462942 -56690940 - MER63 DNA MER1_type -273 789 1 231 306 51 44 chr20 15462947 15462999 -56690883 - L1ME LINE L1 -627 5539 5489 342 0 0 0 chr20 15462999 15463037 -56690845 + (CA)n Simple_repeat Simple_repeat 1 38 0 231 306 51 44 chr20 15463037 15463259 -56690623 - L1ME LINE L1 -677 5489 5263 6818 61 5 0 chr20 15463528 15465122 -56688760 - L1PA7 LINE L1 -6 6148 4544 1920 134 11 0 chr20 15465122 15465405 -56688477 - AluSx SINE Alu -26 286 1 711 282 170 47 chr20 15466057 15466271 -56687611 - L1ME LINE L1 -2678 3468 3282 2294 113 0 6 chr20 15466271 15466582 -56687300 - AluSg SINE Alu -1 309 1 711 282 170 47 chr20 15466582 15466903 -56686979 - L1ME LINE L1 -2864 3282 2867 786 179 7 26 chr20 15466922 15467100 -56686782 - FRAM SINE Alu 0 173 1 364 277 32 74 chr20 15467151 15467491 -56686391 - L1MC5 LINE L1 -104 7857 7549 2817 3 0 10 chr20 15467491 15467803 -56686079 - AluYa5 SINE Alu -2 309 1 364 277 32 74 chr20 15467803 15468029 -56685853 - L1MC5 LINE L1 -412 7549 7315 3601 258 63 36 chr20 15468229 15469620 -56684262 + L1ME1 LINE L1 3547 4898 -1268 378 0 0 0 chr20 15469620 15469662 -56684220 + (CA)n Simple_repeat Simple_repeat 2 43 0 3601 258 63 36 chr20 15469662 15470192 -56683690 + L1ME1 LINE L1 4898 5412 -754 2079 127 3 3 chr20 15470192 15470500 -56683382 + AluSx SINE Alu 1 308 -4 3601 258 63 36 chr20 15470500 15471064 -56682818 + L1ME1 LINE L1 5412 6101 -65 2023 152 0 0 chr20 15473460 15473762 -56680120 - AluSx SINE Alu -10 302 1 794 300 37 4 chr20 15476405 15476648 -56677234 - MIR SINE MIR 0 262 12 27 29 0 0 chr20 15477837 15477871 -56676011 + AT_rich Low_complexity Low_complexity 1 34 0 2104 259 16 40 chr20 15477901 15478570 -56675312 + L1M3e LINE L1 466 1118 -6371 1886 232 81 59 chr20 15478585 15479800 -56674082 + L1M3e LINE L1 2137 3308 -4257 2485 28 0 0 chr20 15479800 15480091 -56673791 + L1PA4 LINE L1 5862 6152 -3 1886 232 81 59 chr20 15480091 15480759 -56673123 + L1M3e LINE L1 3308 3960 -3605 * 14851 174 32 20 chr20 15480758 15483703 -56670179 + L1M3e LINE L1 15 2993 -4572 2018 94 38 38 chr20 15483722 15484063 -56669819 + L1MA1 LINE L1 5962 6302 0 8617 206 52 25 chr20 15484063 15486508 -56667374 + L1M3e LINE L1 3946 6458 -1107 4782 201 12 24 chr20 15486504 15487694 -56666188 - L1 LINE L1 -1592 4554 3379 * 25696 28 12 0 chr20 15487694 15491724 -56662158 + L1PA3 LINE L1 2078 6153 -2 272 241 17 0 chr20 15491991 15492049 -56661833 - L2 LINE L2 0 3272 3214 749 307 70 55 chr20 15493033 15493473 -56660409 + LTR16C LTR ERVL 1 447 -44 300 194 15 30 chr20 15497448 15497515 -56656367 + MIR3 SINE MIR 124 189 -19 259 294 15 15 chr20 15497780 15497848 -56656034 - MIR SINE MIR -63 145 78 262 321 39 99 chr20 15497868 15498310 -56655572 - L2 LINE L2 0 3272 2858 1485 182 39 4 chr20 15499157 15499437 -56654445 + AluJo SINE Alu 1 290 -22 428 222 188 0 chr20 15500700 15500817 -56653065 - MER5A DNA MER1_type 0 189 51 588 316 46 1 chr20 15501421 15501618 -56652264 - MIR SINE MIR -16 246 42 267 313 80 0 chr20 15502021 15502171 -56651711 - MLT1L LTR MaLR -8 607 446 2229 104 0 7 chr20 15502195 15502493 -56651389 - AluSx SINE Alu -16 296 1 21 0 0 0 chr20 15503248 15503269 -56650613 + AT_rich Low_complexity Low_complexity 1 21 0 215 219 0 96 chr20 15503631 15503704 -56650178 + MIR SINE MIR 195 260 -2 376 345 62 0 chr20 15503756 15503901 -56649981 + MIR SINE MIR 13 166 -96 238 264 14 0 chr20 15503939 15504011 -56649871 + (CTA)n Simple_repeat Simple_repeat 2 74 0 669 248 85 99 chr20 15504094 15504635 -56649247 - MLT1G LTR MaLR -17 578 34 216 0 0 0 chr20 15505326 15505350 -56648532 + (CA)n Simple_repeat Simple_repeat 2 25 0 1458 251 96 7 chr20 15506092 15506542 -56647340 + MLT2F LTR ERVL 1 490 -173 275 140 20 0 chr20 15506546 15506596 -56647286 + MLT2F LTR ERVL 613 663 0 338 277 68 47 chr20 15507866 15508014 -56645868 + MIR SINE MIR 38 188 -74 280 344 0 86 chr20 15509393 15509544 -56644338 + L2 LINE L2 3134 3271 -1 222 372 33 44 chr20 15510017 15510200 -56643682 + L2 LINE L2 2014 2194 -1120 205 229 14 29 chr20 15510260 15510330 -56643552 + L2 LINE L2 2323 2391 -923 277 241 25 0 chr20 15510506 15510585 -56643297 - MER103 DNA DNA -71 95 15 630 271 5 5 chr20 15510950 15511138 -56642744 + LTR16A1 LTR ERVL 249 436 -21 185 386 0 0 chr20 15511154 15511242 -56642640 + L2 LINE L2 2573 2660 -654 205 414 7 7 chr20 15511354 15511494 -56642388 + L2 LINE L2 2871 3010 -262 360 0 0 0 chr20 15512541 15512581 -56641301 + (CA)n Simple_repeat Simple_repeat 2 41 0 1602 249 71 31 chr20 15512824 15513346 -56640536 - MLT1H LTR MaLR 0 549 7 2582 118 3 0 chr20 15513610 15513999 -56639883 + L1PA14 LINE L1 5769 6158 -3 21 57 0 0 chr20 15513999 15514034 -56639848 + AT_rich Low_complexity Low_complexity 1 35 0 633 239 82 53 chr20 15514081 15514324 -56639558 - MIR SINE MIR 0 262 13 543 213 149 0 chr20 15514389 15514530 -56639352 - MER5B DNA MER1_type 0 178 17 2373 105 11 35 chr20 15514544 15514917 -56638965 - THE1B LTR MaLR 0 364 1 260 263 35 0 chr20 15514927 15514984 -56638898 + MER5A DNA MER1_type 17 75 -114 708 183 0 8 chr20 15514987 15515107 -56638775 + FLAM_C SINE Alu 3 121 -22 505 298 16 0 chr20 15515119 15515240 -56638642 + MER5A DNA MER1_type 64 186 -3 276 263 142 27 chr20 15515251 15515394 -56638488 + MER5A DNA MER1_type 1 187 -2 207 0 0 0 chr20 15515995 15516018 -56637864 + (A)n Simple_repeat Simple_repeat 1 23 0 418 239 20 78 chr20 15516249 15516364 -56637518 + MER5A DNA MER1_type 9 105 -73 605 211 51 99 chr20 15516735 15517047 -56636835 - LTR16A1 LTR ERVL -152 305 9 1675 198 22 19 chr20 15517047 15517411 -56636471 + MLT1A1 LTR MaLR 1 365 0 393 347 36 21 chr20 15517602 15517795 -56636087 + MLT1K LTR MaLR 38 233 -355 238 270 0 0 chr20 15518092 15518181 -56635701 - L1MC4 LINE L1 -1339 6703 6615 276 185 0 0 chr20 15518182 15518236 -56635646 + (TA)n Simple_repeat Simple_repeat 2 55 0 24 0 0 0 chr20 15518501 15518525 -56635357 + AT_rich Low_complexity Low_complexity 1 24 0 2141 133 3 0 chr20 15518963 15519265 -56634617 - AluSq SINE Alu -10 303 1 207 316 82 31 chr20 15519311 15519409 -56634473 - MIR SINE MIR -133 129 27 1729 64 5 0 chr20 15520103 15520322 -56633560 - AluY SINE Alu -7 304 85 419 357 75 8 chr20 15520851 15521092 -56632790 + MLT1K LTR MaLR 191 447 -141 489 133 407 7 chr20 15521731 15521866 -56632016 - MER5A DNA MER1_type 0 189 1 27 29 0 0 chr20 15522635 15522669 -56631213 + AT_rich Low_complexity Low_complexity 1 34 0 307 315 164 24 chr20 15522838 15523051 -56630831 + L2 LINE L2 3028 3270 -2 291 353 111 0 chr20 15523342 15523532 -56630350 - MIR SINE MIR -50 212 2 2053 196 72 57 chr20 15524104 15524733 -56629149 + LTR9B LTR ERV1 7 644 0 378 219 82 104 chr20 15525123 15525306 -56628576 - L2 LINE L2 0 3313 3135 25 51 0 0 chr20 15525326 15525365 -56628517 + AT_rich Low_complexity Low_complexity 1 39 0 563 291 101 32 chr20 15525370 15525648 -56628234 - L2 LINE L2 -153 3160 2864 7946 248 79 54 chr20 15526024 15528924 -56624958 - L1MC3 LINE L1 -436 7767 4939 2214 108 3 3 chr20 15528924 15529230 -56624652 - AluSx SINE Alu -6 306 1 7946 248 79 54 chr20 15529230 15529890 -56623992 - L1MC3 LINE L1 -3264 4939 4297 535 99 0 12 chr20 15529890 15529971 -56623911 + MADE1 DNA Mariner 1 80 0 7946 248 79 54 chr20 15529971 15530091 -56623791 - L1MC3 LINE L1 -3906 4297 4181 186 43 0 0 chr20 15530091 15530114 -56623768 + (CA)n Simple_repeat Simple_repeat 2 24 0 7946 248 79 54 chr20 15530114 15531393 -56622489 - L1MC3 LINE L1 -4022 4181 2690 1059 247 32 40 chr20 15531539 15531944 -56621938 - L1MC3 LINE L1 -5069 976 575 1502 261 28 37 chr20 15532046 15532609 -56621273 - L1MC3 LINE L1 -5481 564 7 529 177 16 8 chr20 15532668 15532792 -56621090 - L1MB2 LINE L1 -3 6168 6044 29 0 0 0 chr20 15532800 15532829 -56621053 + AT_rich Low_complexity Low_complexity 1 29 0 1060 120 0 0 chr20 15532838 15533005 -56620877 - L1MA4 LINE L1 -7 6293 6127 3079 200 39 27 chr20 15533016 15533367 -56620515 - L1MB3 LINE L1 -149 6034 5689 2261 104 0 10 chr20 15533367 15533675 -56620207 - AluSg SINE Alu -5 305 1 3079 200 39 27 chr20 15533675 15534068 -56619814 - L1MB3 LINE L1 -494 5689 5281 * 4780 204 29 10 chr20 15534053 15535653 -56618229 - L1MC2 LINE L1 -10 6334 4705 441 0 0 0 chr20 15536261 15536310 -56617572 + (CA)n Simple_repeat Simple_repeat 2 50 0 207 191 21 0 chr20 15537619 15537666 -56616216 + L2 LINE L2 3264 3311 -2 201 250 0 0 chr20 15537748 15537788 -56616094 + (CA)n Simple_repeat Simple_repeat 1 40 0 812 230 11 21 chr20 15537788 15537979 -56615903 - MER5A DNA MER1_type 0 189 1 1678 275 90 8 chr20 15538996 15539531 -56614351 - MER119 DNA MER1_type 0 583 5 1524 202 48 71 chr20 15539556 15540032 -56613850 + MLT1C LTR MaLR 1 465 -2 348 262 127 93 chr20 15540287 15540524 -56613358 + MLT1J LTR MaLR 230 474 -37 411 299 15 54 chr20 15540804 15541008 -56612874 - L2 LINE L2 -4 3309 3114 1370 192 58 33 chr20 15541013 15541233 -56612649 - MLT1B LTR MaLR 0 390 152 2307 103 3 0 chr20 15541233 15541533 -56612349 + AluSp SINE Alu 1 301 -12 1370 192 58 33 chr20 15541533 15541659 -56612223 - MLT1B LTR MaLR -238 152 31 1846 194 15 50 chr20 15541660 15542120 -56611762 + L1MB7 LINE L1 5722 6165 -19 730 291 36 8 chr20 15542449 15542696 -56611186 + MIR SINE MIR 8 261 -1 2068 140 0 34 chr20 15542985 15543353 -56610529 - AluSx SINE Alu 0 357 1 644 181 105 23 chr20 15543417 15543588 -56610294 + MLT1B LTR MaLR 1 185 -189 759 216 53 11 chr20 15543639 15543829 -56610053 + MLT1B LTR MaLR 188 385 -5 534 222 0 102 chr20 15544756 15544981 -56608901 + MER3 DNA MER1_type 8 209 0 21 0 0 0 chr20 15546871 15546892 -56606990 + AT_rich Low_complexity Low_complexity 1 21 0 1261 261 131 4 chr20 15547184 15547402 -56606480 - MLT1H LTR MaLR -2 547 358 180 0 0 0 chr20 15547402 15547422 -56606460 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 1261 261 131 4 chr20 15547422 15547655 -56606227 - MLT1H LTR MaLR -191 358 39 563 186 7 28 chr20 15548311 15548456 -56605426 - Charlie5 DNA MER1_type -27 2585 2444 237 314 0 0 chr20 15548529 15548599 -56605283 + L2 LINE L2 3203 3272 0 21 0 0 0 chr20 15549460 15549481 -56604401 + AT_rich Low_complexity Low_complexity 1 21 0 942 176 0 19 chr20 15549590 15549749 -56604133 + FRAM SINE Alu 1 156 -10 580 316 7 0 chr20 15551112 15551267 -56602615 + L2 LINE L2 3158 3313 0 1235 280 95 30 chr20 15552023 15552562 -56601320 - MLT1E LTR MaLR -11 582 9 21 0 0 0 chr20 15552608 15552629 -56601253 + AT_rich Low_complexity Low_complexity 1 21 0 466 307 17 39 chr20 15552629 15552808 -56601074 - MIR SINE MIR -21 241 67 1029 163 87 117 chr20 15553520 15553820 -56600062 + AluJb SINE Alu 17 307 -5 2744 263 64 8 chr20 15554087 15554256 -56599626 + L1M4 LINE L1 3553 3711 -2435 2257 110 0 0 chr20 15554256 15554555 -56599327 + AluSx SINE Alu 1 299 -13 2744 263 64 8 chr20 15554555 15554955 -56598927 + L1M4 LINE L1 3711 4087 -2059 207 100 0 0 chr20 15554955 15554985 -56598897 + (CAAT)n Simple_repeat Simple_repeat 3 32 0 2744 263 64 8 chr20 15554985 15555484 -56598398 + L1M4 LINE L1 4087 4681 -1465 685 63 0 0 chr20 15555485 15555580 -56598302 + L1MD1 LINE L1 6148 6242 0 26 0 0 0 chr20 15556256 15556282 -56597600 + AT_rich Low_complexity Low_complexity 1 26 0 1930 99 0 99 chr20 15556337 15556535 -56597347 + L1PA15 LINE L1 5847 5996 -169 2442 93 0 0 chr20 15556535 15556846 -56597036 + AluY SINE Alu 1 311 0 1930 99 0 99 chr20 15556846 15556999 -56596883 + L1PA15 LINE L1 5996 6163 -2 304 283 40 10 chr20 15558348 15558447 -56595435 - L3 LINE CR1 -261 1316 1215 187 319 43 11 chr20 15558765 15558859 -56595023 - MIR SINE MIR -81 127 31 2256 116 7 0 chr20 15559362 15559672 -56594210 - AluSx SINE Alu 0 312 1 677 283 63 0 chr20 15559777 15560000 -56593882 + LTR16C LTR ERVL 255 491 0 371 294 56 25 chr20 15561098 15561295 -56592587 + LTR16A1 LTR ERVL 182 384 -73 475 308 62 25 chr20 15561750 15561990 -56591892 - MIR SINE MIR 0 262 14 1620 187 61 19 chr20 15562212 15562591 -56591291 - MSTD LTR MaLR 0 396 2 33 0 0 0 chr20 15563048 15563081 -56590801 + AT_rich Low_complexity Low_complexity 1 33 0 691 260 128 13 chr20 15564395 15564793 -56589089 + MLT1G3 LTR MaLR 32 583 -12 1705 187 0 41 chr20 15565324 15565640 -56588242 - AluJo SINE Alu -9 303 1 30 0 0 0 chr20 15565688 15565718 -56588164 + AT_rich Low_complexity Low_complexity 1 30 0 324 200 25 100 chr20 15565772 15565892 -56587990 - MER58C DNA MER1_type 0 215 105 315 238 86 19 chr20 15565903 15566008 -56587874 - MER58C DNA MER1_type -84 131 20 596 184 22 15 chr20 15566290 15566426 -56587456 + MER103 DNA DNA 11 147 -19 742 178 0 0 chr20 15566507 15566636 -56587246 - L1PB4 LINE L1 0 6156 6028 183 323 16 0 chr20 15567190 15567252 -56586630 - L2 LINE L2 0 3313 3251 452 274 161 9 chr20 15568513 15568736 -56585146 + MLT1K LTR MaLR 319 575 -13 235 246 0 15 chr20 15569082 15569147 -56584735 - LTR16C LTR ERVL -136 355 292 252 193 123 105 chr20 15569268 15569382 -56584500 - MIR SINE MIR -72 136 21 260 192 64 58 chr20 15569432 15569588 -56584294 + MER113 DNA MER1_type? 28 184 -337 256 330 0 31 chr20 15569689 15569786 -56584096 + MIR SINE MIR 169 262 0 269 156 156 31 chr20 15570916 15570980 -56582902 - LTR16C LTR ERVL 0 491 420 1452 48 21 0 chr20 15571146 15571334 -56582548 + LOR1b-int LTR ERV1 5848 6039 -2081 525 167 11 0 chr20 15571336 15571426 -56582456 + LOR1b-int LTR ERV1 8030 8120 0 2350 153 66 14 chr20 15571426 15571863 -56582019 + LOR1b LTR ERV1 1 460 -1 746 105 0 0 chr20 15572136 15572231 -56581651 - LTR12 LTR ERV1 0 714 620 747 235 71 6 chr20 15572711 15572881 -56581001 - MIR SINE MIR -81 181 1 297 294 56 40 chr20 15573043 15573169 -56580713 + MIR SINE MIR 57 184 -78 2704 83 6 0 chr20 15573193 15573543 -56580339 + L1P LINE L1 2 353 -5793 753 193 223 55 chr20 15573660 15573726 -56580156 + MER69 DNA AcHobo 78 132 -2394 2270 162 37 5 chr20 15573726 15574157 -56579725 - L1MB7 LINE L1 0 6184 5740 753 193 223 55 chr20 15574157 15574328 -56579554 + MER69 DNA AcHobo 132 355 -2171 811 161 0 2 chr20 15574337 15574537 -56579345 + MSTC LTR MaLR 3 249 -179 * 1812 140 30 0 chr20 15574535 15574800 -56579082 + MSTC LTR MaLR 66 338 -90 338 161 86 86 chr20 15574900 15574981 -56578901 - LTR30 LTR ERV1 -84 614 479 5287 181 90 51 chr20 15574981 15576216 -56577666 - pTR5 LTR ERV1 -413 2025 743 1510 146 32 0 chr20 15576407 15576653 -56577229 + Tigger7 DNA MER2_type 2238 2491 0 243 378 0 0 chr20 15577244 15577355 -56576527 + MIR3 SINE MIR 44 154 -54 22 0 0 0 chr20 15577980 15578002 -56575880 + AT_rich Low_complexity Low_complexity 1 22 0 226 221 13 39 chr20 15578304 15578381 -56575501 + MIR SINE MIR 76 150 -58 874 252 71 45 chr20 15579160 15579470 -56574412 - MLT1H LTR MaLR -195 354 37 218 354 0 0 chr20 15579525 15579621 -56574261 + (TG)n Simple_repeat Simple_repeat 2 97 0 359 281 215 0 chr20 15579867 15580002 -56573880 + MIR SINE MIR 20 183 -79 1301 203 92 21 chr20 15580776 15581165 -56572717 - MER113 DNA MER1_type? -96 425 9 298 152 0 0 chr20 15581198 15581244 -56572638 - L2 LINE L2 -1 3312 3267 235 318 91 45 chr20 15581279 15581521 -56572361 - L2 LINE L2 -477 2837 2585 207 261 29 72 chr20 15581516 15581585 -56572297 + L2 LINE L2 3207 3272 0 * 441 283 88 13 chr20 15581631 15581790 -56572092 - MIR3 SINE MIR 0 208 38 1173 277 102 13 chr20 15581972 15582365 -56571517 - MLT1K LTR MaLR -144 444 17 825 275 26 70 chr20 15582401 15582714 -56571168 + L2 LINE L2 2962 3260 -12 294 187 13 32 chr20 15583703 15583858 -56570024 + GA-rich Low_complexity Low_complexity 1 152 0 373 207 14 27 chr20 15583999 15584072 -56569810 - AluS SINE Alu -237 66 1 1358 181 47 29 chr20 15584094 15584371 -56569511 - AluJo SINE Alu -30 282 1 189 175 0 0 chr20 15584475 15584515 -56569367 + G-rich Low_complexity Low_complexity 4 43 0 1690 250 40 10 chr20 15585345 15585749 -56568133 + LTR16C LTR ERVL 69 484 -7 293 296 74 127 chr20 15585949 15586233 -56567649 + L2 LINE L2 3004 3272 0 653 218 108 98 chr20 15586693 15587009 -56566873 - MER102b DNA MER1_type -17 324 6 691 242 23 51 chr20 15587367 15587582 -56566300 - MIR SINE MIR -48 214 6 353 248 97 35 chr20 15587677 15587822 -56566060 + MIR SINE MIR 7 160 -102 433 293 80 100 chr20 15588230 15588897 -56564985 + L2 LINE L2 2637 3272 0 201 268 18 0 chr20 15588897 15588953 -56564929 + (TGGA)n Simple_repeat Simple_repeat 2 58 0 448 285 23 41 chr20 15589425 15589597 -56564285 + MIR3 SINE MIR 9 177 -31 697 191 227 0 chr20 15590955 15591180 -56562702 - L2 LINE L2 -598 2716 2441 190 302 94 19 chr20 15591203 15591362 -56562520 + L2 LINE L2 2481 2651 -663 482 269 0 22 chr20 15591652 15591786 -56562096 + MIR SINE MIR 23 153 -109 406 227 127 0 chr20 15591894 15592004 -56561878 + MIR SINE MIR 22 145 -117 180 296 0 19 chr20 15592507 15592561 -56561321 + MIR SINE MIR 90 142 -66 210 207 0 0 chr20 15592683 15592741 -56561141 + (CA)n Simple_repeat Simple_repeat 1 58 0 358 306 52 8 chr20 15592862 15592996 -56560886 - MIR SINE MIR -77 185 46 273 222 32 0 chr20 15593127 15593190 -56560692 + MIR SINE MIR 82 146 -62 423 248 130 0 chr20 15593631 15593801 -56560081 - MIR SINE MIR -33 229 43 190 234 141 0 chr20 15594815 15594879 -56559003 + L2 LINE L2 3026 3098 -174 624 243 123 65 chr20 15595217 15595374 -56558508 - L2 LINE L2 -248 3065 2918 1759 142 43 0 chr20 15595374 15595656 -56558226 + AluSg SINE Alu 1 294 -16 624 243 123 65 chr20 15595656 15595875 -56558007 - L2 LINE L2 -395 2918 2661 236 208 0 0 chr20 15595876 15595924 -56557958 + (TGAA)n Simple_repeat Simple_repeat 3 50 0 261 281 0 24 chr20 15596532 15596614 -56557268 + GA-rich Low_complexity Low_complexity 2 81 0 701 255 5 32 chr20 15596623 15596811 -56557071 - MIR SINE MIR -19 243 61 641 323 62 50 chr20 15597246 15597630 -56556252 - L2 LINE L2 -1 3271 2883 330 366 16 21 chr20 15597918 15598104 -56555778 + MIR SINE MIR 38 222 -40 618 264 108 35 chr20 15598182 15598410 -56555472 + MIR SINE MIR 17 262 0 237 209 0 0 chr20 15599509 15599552 -56554330 - MIR SINE MIR -55 153 111 556 257 17 0 chr20 15599562 15599728 -56554154 + MIR SINE MIR 20 187 -50 351 232 0 58 chr20 15601529 15601643 -56552239 - MER5A DNA MER1_type -80 109 4 285 281 50 50 chr20 15602437 15602558 -56551324 + MLT1H LTR MaLR 429 549 0 497 340 21 71 chr20 15602591 15602929 -56550953 + L2 LINE L2 2915 3235 -37 192 77 0 0 chr20 15603634 15603660 -56550222 + (CCAA)n Simple_repeat Simple_repeat 2 27 0 1031 284 77 17 chr20 15603662 15604130 -56549752 + L1MC4 LINE L1 7538 8033 -9 1047 304 78 6 chr20 15605180 15605538 -56548344 + LTR16C LTR ERVL 74 457 -34 270 322 20 47 chr20 15605608 15605757 -56548125 - L2 LINE L2 -79 3234 3090 729 47 0 0 chr20 15605814 15605900 -56547982 + L1PA3 LINE L1 13 98 -6048 * 39237 33 10 1 chr20 15605894 15611387 -56542495 + L1PA3 LINE L1 617 6153 -2 268 241 17 0 chr20 15611654 15611712 -56542170 - L2 LINE L2 0 3272 3214 896 296 77 61 chr20 15612696 15613136 -56540746 + LTR16C LTR ERVL 1 447 -44 30 69 0 0 chr20 15613860 15613918 -56539964 + AT_rich Low_complexity Low_complexity 1 58 0 234 328 76 8 chr20 15614089 15614220 -56539662 + MIR SINE MIR 53 192 -70 835 204 26 87 chr20 15614380 15614611 -56539271 + MER20 DNA MER1_type 3 219 0 296 231 124 43 chr20 15614777 15614909 -56538973 + MLT1I LTR MaLR 20 171 -238 335 226 87 78 chr20 15615057 15615172 -56538710 + MLT1H LTR MaLR 421 536 -13 296 94 19 0 chr20 15615593 15615646 -56538236 + (CAAAC)n Simple_repeat Simple_repeat 1 54 0 2211 78 0 0 chr20 15616280 15616595 -56537287 + AluY SINE Alu 1 315 0 3707 198 66 23 chr20 15616658 15617273 -56536609 - L1MD1 LINE L1 -107 6529 5942 5103 91 100 13 chr20 15617273 15618033 -56535849 - LTR12 LTR ERV1 0 826 1 3707 198 66 23 chr20 15618033 15618568 -56535314 - L1MD1 LINE L1 -694 5942 5336 7004 176 10 1 chr20 15618606 15620688 -56533194 - L1PA13 LINE L1 0 6163 4055 1773 247 42 27 chr20 15620695 15621360 -56532522 - L1MD1 LINE L1 -1198 5342 4668 238 284 29 48 chr20 15621366 15621574 -56532308 - L1MD1 LINE L1 -2542 3998 3795 2087 223 35 67 chr20 15621641 15622205 -56531677 + MLT2B3 LTR ERVL 1 546 -8 2253 258 87 13 chr20 15622207 15623230 -56530652 - L1MD1 LINE L1 -2897 3643 2516 1165 244 103 0 chr20 15623221 15623569 -56530313 - L1MD1 LINE L1 -6129 411 28 * 389 320 126 5 chr20 15623587 15623793 -56530089 + MIR SINE MIR 31 261 -1 235 319 0 0 chr20 15623794 15623866 -56530016 + (TTA)n Simple_repeat Simple_repeat 2 73 0 285 303 0 0 chr20 15625013 15625079 -56528803 + MIR SINE MIR 123 188 -74 276 193 42 32 chr20 15626450 15626545 -56527337 + MIR SINE MIR 86 183 -63 276 297 14 81 chr20 15627023 15627171 -56526711 - MIR SINE MIR -14 248 111 768 272 86 13 chr20 15628429 15628661 -56525221 - MIR SINE MIR -10 252 4 305 301 0 53 chr20 15628703 15628816 -56525066 + MIR SINE MIR 128 234 -28 240 35 0 0 chr20 15628881 15628910 -56524972 + (ATG)n Simple_repeat Simple_repeat 1 29 0 223 341 119 8 chr20 15631156 15631282 -56522600 + MIR SINE MIR 21 160 -102 21 36 0 0 chr20 15631319 15631347 -56522535 + AT_rich Low_complexity Low_complexity 1 28 0 232 196 0 22 chr20 15631348 15631394 -56522488 - MIR SINE MIR -1 261 217 352 325 63 16 chr20 15631404 15631595 -56522287 - L1ME3A LINE L1 -1 6169 5970 1095 133 13 0 chr20 15631669 15631827 -56522055 - AluSg/x SINE Alu -18 294 135 441 117 0 0 chr20 15631827 15631887 -56521995 - AluSq SINE Alu -111 202 143 1460 122 0 24 chr20 15631887 15632100 -56521782 - AluSq SINE Alu -103 210 3 1329 282 50 25 chr20 15632101 15632950 -56520932 - L1ME3A LINE L1 -213 5949 5083 261 0 0 0 chr20 15633261 15633290 -56520592 + (CA)n Simple_repeat Simple_repeat 1 29 0 361 321 105 12 chr20 15633622 15633784 -56520098 - MIR3 SINE MIR -11 197 21 22 70 0 0 chr20 15633953 15633996 -56519886 + AT_rich Low_complexity Low_complexity 1 43 0 2014 229 35 43 chr20 15634012 15634640 -56519242 + L1ME3A LINE L1 5318 5940 -230 1148 216 4 13 chr20 15634646 15634877 -56519005 - MER8 DNA MER2_type 0 239 11 394 202 92 140 chr20 15634887 15635115 -56518767 + L1ME3A LINE L1 5954 6170 0 304 258 101 25 chr20 15635775 15635934 -56517948 - MIR SINE MIR -72 190 20 285 196 22 11 chr20 15636657 15636749 -56517133 + (CA)n Simple_repeat Simple_repeat 1 93 0 401 286 9 0 chr20 15636778 15636883 -56516999 + MIR SINE MIR 34 139 -123 358 319 58 10 chr20 15637033 15637240 -56516642 + L3 LINE CR1 1308 1524 -53 379 339 119 0 chr20 15637637 15637805 -56516077 + LTR16C LTR ERVL 65 252 -239 354 289 16 8 chr20 15637806 15637927 -56515955 + LTR16C LTR ERVL 367 488 -3 237 245 75 43 chr20 15638076 15638170 -56515712 + L2 LINE L2 3163 3259 -13 1029 273 33 15 chr20 15638321 15638717 -56515165 - L1ME3A LINE L1 -189 5981 5579 675 146 9 0 chr20 15638765 15638875 -56515007 + FLAM_C SINE Alu 1 111 -32 350 38 50 38 chr20 15638881 15638961 -56514921 + (TA)n Simple_repeat Simple_repeat 2 82 0 870 237 0 0 chr20 15638961 15639130 -56514752 + AluJb SINE Alu 135 303 -9 30 45 0 0 chr20 15639139 15639183 -56514699 + AT_rich Low_complexity Low_complexity 1 44 0 276 317 21 49 chr20 15639362 15639504 -56514378 - LTR16C LTR ERVL -281 210 73 24 0 0 0 chr20 15640095 15640119 -56513763 + AT_rich Low_complexity Low_complexity 1 24 0 228 67 0 0 chr20 15640967 15640997 -56512885 + (CA)n Simple_repeat Simple_repeat 1 30 0 816 200 0 0 chr20 15640998 15641143 -56512739 + MER82 DNA MER2_type 2 146 -507 1870 237 11 26 chr20 15641577 15642032 -56511850 + MER82 DNA MER2_type 200 647 -6 339 325 45 13 chr20 15642334 15642491 -56511391 + MIR SINE MIR 51 212 -50 325 280 110 0 chr20 15642660 15642760 -56511122 + MLT1I LTR MaLR 232 342 -67 196 250 136 45 chr20 15643178 15643266 -56510616 - L2 LINE L2 -300 2972 2877 532 273 91 6 chr20 15644271 15644447 -56509435 + MIR SINE MIR 72 262 0 405 228 73 49 chr20 15644443 15644566 -56509316 - MIR SINE MIR -64 198 73 * 358 323 115 38 chr20 15644752 15645117 -56508765 - L1ME2 LINE L1 -259 5905 5510 2540 47 3 0 chr20 15645369 15645665 -56508217 - AluY SINE Alu -8 303 7 230 176 33 22 chr20 15646759 15646850 -56507032 + (CATA)n Simple_repeat Simple_repeat 3 94 0 314 168 9 28 chr20 15646897 15647004 -56506878 + (CA)n Simple_repeat Simple_repeat 2 106 0 332 198 0 12 chr20 15648043 15648124 -56505758 + CT-rich Low_complexity Low_complexity 2 81 0 407 341 145 21 chr20 15648855 15649339 -56504543 + MLT1K LTR MaLR 3 546 -42 317 327 176 7 chr20 15649560 15649713 -56504169 - MER5A DNA MER1_type 0 189 11 376 230 73 79 chr20 15652036 15652214 -56501668 + MIR3 SINE MIR 32 208 0 * 805 290 88 64 chr20 15652203 15652988 -56500894 + L2 LINE L2 2471 3293 -20 1830 79 19 11 chr20 15652994 15653261 -56500621 + L1PA8A LINE L1 5835 6103 -28 830 269 61 19 chr20 15653643 15653955 -56499927 + LTR16C LTR ERVL 161 485 -6 582 284 87 29 chr20 15654144 15654352 -56499530 + MIR SINE MIR 22 241 -21 4760 174 45 21 chr20 15654924 15654990 -56498892 - L1MA9 LINE L1 -3 6309 6246 218 32 32 0 chr20 15654990 15655021 -56498861 + (TA)n Simple_repeat Simple_repeat 1 32 0 4760 174 45 21 chr20 15655021 15655075 -56498807 - L1MA9 LINE L1 -66 6246 6195 192 77 0 0 chr20 15655075 15655101 -56498781 + (TG)n Simple_repeat Simple_repeat 1 26 0 4760 174 45 21 chr20 15655101 15656085 -56497797 - L1MA9 LINE L1 -117 6195 5237 1685 168 32 0 chr20 15656085 15656365 -56497517 - AluSx SINE Alu -9 303 15 4760 174 45 21 chr20 15656365 15656483 -56497399 - L1MA9 LINE L1 -1075 5237 5123 7410 38 3 0 chr20 15656483 15657563 -56496319 + L1PA4 LINE L1 5071 6153 -2 4760 174 45 21 chr20 15657563 15657825 -56496057 - L1MA9 LINE L1 -1189 5123 4787 2182 167 56 31 chr20 15658427 15658841 -56495041 - MSTB LTR MaLR -2 424 1 439 317 25 50 chr20 15659696 15659895 -56493987 + MIR SINE MIR 66 259 -3 592 233 0 0 chr20 15660523 15660639 -56493243 + MER45A DNA AcHobo 35 150 -28 8776 190 64 15 chr20 15660959 15662844 -56491038 - L1MA4A LINE L1 -5 7000 4866 2239 61 64 0 chr20 15662844 15663124 -56490758 - AluY SINE Alu -12 299 2 8776 190 64 15 chr20 15663124 15664616 -56489266 - L1MA4A LINE L1 -2139 4866 3448 1568 128 0 9 chr20 15664618 15664836 -56489046 - AluSg/x SINE Alu -24 288 73 3202 232 42 96 chr20 15664836 15667391 -56486491 - L1MA4A LINE L1 -4083 2766 6 1945 82 0 4 chr20 15667984 15668240 -56485642 - AluY SINE Alu -1 310 56 41039 31 23 1 chr20 15668523 15674542 -56479340 + L1HS LINE L1 4 6153 -2 195 393 11 0 chr20 15674588 15674677 -56479205 + L2 LINE L2 2698 2787 -527 344 258 11 22 chr20 15674816 15674905 -56478977 + L2 LINE L2 3170 3257 -15 4644 111 3 8 chr20 15674985 15675600 -56478282 + LTR9 LTR ERV1 1 612 0 32 26 0 0 chr20 15675724 15675763 -56478119 + AT_rich Low_complexity Low_complexity 1 39 0 621 138 37 28 chr20 15675906 15676015 -56477867 + MSTC LTR MaLR 1 110 -318 2451 71 0 10 chr20 15676048 15676357 -56477525 - AluY SINE Alu -5 306 1 769 215 45 6 chr20 15676412 15676589 -56477293 + MIR SINE MIR 66 249 -13 231 36 0 0 chr20 15676591 15676619 -56477263 + (TTA)n Simple_repeat Simple_repeat 2 29 0 189 311 73 53 chr20 15677273 15677424 -56476458 - L2 LINE L2 -21 3292 3139 272 272 11 43 chr20 15678503 15678595 -56475287 + L1ME1 LINE L1 5915 6003 -163 661 191 19 19 chr20 15678597 15678759 -56475123 + L1MA10 LINE L1 6171 6332 -2 2039 101 40 3 chr20 15678768 15679066 -56474816 + AluSp SINE Alu 1 309 -4 23 33 0 0 chr20 15679198 15679228 -56474654 + AT_rich Low_complexity Low_complexity 1 30 0 2313 165 64 2 chr20 15680897 15681304 -56472578 + LTR32 LTR ERVL 6 437 -34 1469 249 50 28 chr20 15681305 15681770 -56472112 - L1ME3A LINE L1 -28 6142 5668 599 226 72 32 chr20 15681781 15682002 -56471880 - L1ME3A LINE L1 -765 5381 5152 2610 145 41 10 chr20 15682129 15682544 -56471338 + MSTA LTR MaLR 1 428 0 1269 194 115 3 chr20 15683283 15683571 -56470311 + MER33 DNA MER1_type 1 320 -4 258 81 0 0 chr20 15683670 15683707 -56470175 + (CA)n Simple_repeat Simple_repeat 2 38 0 374 246 18 9 chr20 15684223 15684333 -56469549 - MIR SINE MIR -35 227 117 2199 166 79 20 chr20 15684352 15684755 -56469127 + MSTC LTR MaLR 2 428 0 624 141 0 10 chr20 15685555 15685654 -56468228 + MER4A LTR ERV1 1 98 -566 1807 151 6 22 chr20 15685654 15686005 -56467877 + MER4A LTR ERV1 261 664 0 2246 124 32 24 chr20 15687893 15688263 -56465619 - THE1C LTR MaLR -2 373 1 1709 246 117 22 chr20 15688902 15689377 -56464505 + L1ME3A LINE L1 5535 6076 -94 417 75 194 0 chr20 15689377 15689444 -56464438 + MADE1 DNA Mariner 1 80 0 1709 246 117 22 chr20 15689444 15689549 -56464333 + L1ME3A LINE L1 6076 6170 0 229 358 29 44 chr20 15689631 15689768 -56464114 - L2 LINE L2 -2 3270 3136 406 289 92 29 chr20 15690287 15690460 -56463422 - MIR SINE MIR -44 218 35 185 397 15 0 chr20 15691087 15691155 -56462727 - MIR3 SINE MIR -32 176 108 254 256 216 51 chr20 15691158 15691412 -56462470 - MLT1H LTR MaLR -2 547 252 387 339 29 12 chr20 15691442 15691613 -56462269 - MLT1H LTR MaLR -373 176 3 686 335 27 48 chr20 15692556 15692932 -56460950 + LTR16C LTR ERVL 99 466 -25 224 375 104 10 chr20 15692971 15693280 -56460602 + L2 LINE L2 1906 2243 -1071 860 210 77 5 chr20 15693342 15693537 -56460345 + MER3 DNA MER1_type 1 209 0 316 345 111 19 chr20 15693752 15694018 -56459864 + L1M4 LINE L1 4730 5039 -1107 6504 106 11 8 chr20 15694018 15695177 -56458705 + L1PA13 LINE L1 4999 6161 -2 316 345 111 19 chr20 15695177 15695269 -56458613 + L1M4 LINE L1 5039 5121 -1025 247 267 0 0 chr20 15695331 15695391 -56458491 - L2 LINE L2 -72 3241 3182 448 270 10 0 chr20 15695426 15695526 -56458356 - MER94 DNA DNA -33 101 1 36 0 0 0 chr20 15695836 15695872 -56458010 + AT_rich Low_complexity Low_complexity 1 36 0 572 292 64 58 chr20 15695940 15696036 -56457846 - L1MC4a LINE L1 -302 5819 5725 1675 231 110 79 chr20 15696036 15696643 -56457239 + MLT1E2 LTR MaLR 1 626 0 572 292 64 58 chr20 15696643 15697084 -56456798 - L1MC4a LINE L1 -396 5725 5338 372 210 67 25 chr20 15697712 15697831 -56456051 - L1MC4 LINE L1 -2 8040 7917 2002 142 15 89 chr20 15697963 15698358 -56455524 - MER47A DNA MER2_type 0 366 1 769 240 76 32 chr20 15698367 15698617 -56455265 - L1ME2 LINE L1 -9 6155 5895 768 136 57 0 chr20 15700972 15701112 -56452770 + Charlie5 DNA MER1_type 2471 2618 0 275 236 36 0 chr20 15701126 15701181 -56452701 + MER58 DNA MER1_type 1 57 -158 * 357 224 0 0 chr20 15701175 15701242 -56452640 + MER58 DNA MER1_type 169 235 -2185 722 317 85 17 chr20 15701767 15702177 -56451705 + L2 LINE L2 1372 1809 -1505 3785 124 12 0 chr20 15702177 15702854 -56451028 + L1PB1 LINE L1 5120 5803 -348 195 70 47 23 chr20 15702927 15702970 -56450912 + (TA)n Simple_repeat Simple_repeat 1 44 0 2570 82 10 69 chr20 15702977 15703168 -56450714 + L1PB1 LINE L1 5782 5940 -211 2137 71 7 11 chr20 15703168 15703451 -56450431 + AluY SINE Alu 21 302 -9 2570 82 10 69 chr20 15703451 15703651 -56450231 + L1PB1 LINE L1 5940 6150 -1 1719 292 60 21 chr20 15703664 15704376 -56449506 + L2 LINE L2 1794 2533 -781 248 240 13 197 chr20 15704453 15704686 -56449196 + L2 LINE L2 3032 3221 -92 6213 115 15 8 chr20 15704746 15706561 -56447321 - L1PA13 LINE L1 -11 6152 4328 1406 212 48 15 chr20 15706561 15706891 -56446991 - MER63 DNA MER1_type -36 1024 684 204 286 39 26 chr20 15706891 15706968 -56446914 - MIR SINE MIR -152 110 33 231 205 121 24 chr20 15707033 15707116 -56446766 - MLT1K LTR MaLR -342 246 156 2435 70 7 0 chr20 15707146 15707446 -56446436 + AluSx SINE Alu 1 302 -10 382 303 0 106 chr20 15708417 15708481 -56445401 + MIR SINE MIR 57 126 -136 207 0 0 0 chr20 15708481 15708504 -56445378 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1723 134 3 49 chr20 15708506 15708790 -56445092 - AluSx SINE Alu -31 281 11 382 303 0 106 chr20 15708790 15708940 -56444942 + MIR SINE MIR 127 251 -11 388 268 72 13 chr20 15709239 15709392 -56444490 + L1MC/D LINE L1 4915 5076 -1070 483 279 88 60 chr20 15709627 15710046 -56443836 + L1MC/D LINE L1 5385 5815 -1993 1233 275 49 56 chr20 15710608 15711491 -56442391 - L2 LINE L2 0 3313 2427 186 43 0 0 chr20 15712915 15712938 -56440944 + (T)n Simple_repeat Simple_repeat 1 23 0 277 320 108 26 chr20 15713653 15713847 -56440035 + MIR SINE MIR 1 210 -52 22 0 0 0 chr20 15715436 15715458 -56438424 + AT_rich Low_complexity Low_complexity 1 22 0 2840 64 35 0 chr20 15715564 15715907 -56437975 + THE1A LTR MaLR 1 355 0 3703 50 0 15 chr20 15715914 15716369 -56437513 - LTR7 LTR ERV1 -2 448 1 2532 81 45 13 chr20 15716369 15716750 -56437132 - HERVH LTR ERV1 0 7713 7321 1394 127 18 18 chr20 15716747 15716967 -56436915 - HERVH LTR ERV1 -1894 5819 5600 * 4359 147 3 1 chr20 15716968 15717629 -56436253 - HERVH LTR ERV1 -2564 5149 4488 3214 133 2 6 chr20 15717631 15718135 -56435747 - HERVH LTR ERV1 -3720 3993 3492 985 127 7 0 chr20 15718125 15718275 -56435607 - HERVH LTR ERV1 -4423 3290 3140 * 20835 90 14 20 chr20 15718261 15721272 -56432610 - HERVH LTR ERV1 -4721 2992 1 3647 57 0 15 chr20 15721274 15721729 -56432153 - LTR7 LTR ERV1 -2 448 1 752 286 125 0 chr20 15721734 15721958 -56431924 - LTR16C LTR ERVL 0 491 240 3640 60 7 5 chr20 15722156 15722603 -56431279 - LTR7 LTR ERV1 -2 448 1 201 173 27 40 chr20 15722799 15722874 -56431008 + GA-rich Low_complexity Low_complexity 4 77 0 22 35 0 0 chr20 15723092 15723121 -56430761 + AT_rich Low_complexity Low_complexity 1 29 0 1791 125 0 0 chr20 15723441 15723681 -56430201 - AluSg SINE Alu -68 242 3 475 325 7 0 chr20 15723681 15723835 -56430047 + MIR SINE MIR 99 253 -9 1453 159 51 57 chr20 15724174 15724470 -56429412 - AluJo SINE Alu -13 299 6 769 260 154 55 chr20 15724579 15725302 -56428580 - LTR1 LTR ERV1 0 826 18 184 273 78 52 chr20 15726263 15726340 -56427542 - L2 LINE L2 -1 3312 3234 186 103 0 0 chr20 15726844 15726873 -56427009 + (TC)n Simple_repeat Simple_repeat 2 30 0 296 304 40 92 chr20 15727243 15727493 -56426389 + L2 LINE L2 3032 3268 -4 192 179 0 0 chr20 15727573 15727612 -56426270 + T-rich Low_complexity Low_complexity 1 39 0 2299 114 0 0 chr20 15727634 15727942 -56425940 - AluSq SINE Alu -5 308 1 661 159 0 0 chr20 15728022 15728129 -56425753 - FLAM_C SINE Alu -25 118 12 416 160 13 0 chr20 15729087 15729162 -56424720 - L1PB3 LINE L1 0 6154 6079 372 329 156 22 chr20 15729621 15729986 -56423896 - L1M4 LINE L1 -1386 4760 4347 284 339 8 8 chr20 15730152 15730282 -56423600 - L1M4 LINE L1 -1999 4147 4018 226 209 0 93 chr20 15730357 15730443 -56423439 + (TATATG)n Simple_repeat Simple_repeat 6 83 0 204 158 0 0 chr20 15730448 15730486 -56423396 + (TA)n Simple_repeat Simple_repeat 1 38 0 452 266 77 39 chr20 15730502 15730913 -56422969 - L1M4 LINE L1 -2211 3935 3521 217 352 34 0 chr20 15731691 15731779 -56422103 - MIR SINE MIR -110 152 62 197 319 14 0 chr20 15781931 15782000 -56371882 + MIR SINE MIR 180 249 -13 1634 237 74 9 chr20 15782169 15782616 -56371266 - L1ME3A LINE L1 -35 6135 5660 2325 106 0 0 chr20 15782902 15783203 -56370679 + AluSc SINE Alu 5 305 -4 297 384 81 34 chr20 15783469 15783792 -56370090 - L2 LINE L2 0 3272 2935 226 260 0 0 chr20 15783996 15784046 -56369836 + L1MC4 LINE L1 7630 7679 -363 2027 113 3 48 chr20 15784269 15784579 -56369303 + AluSx SINE Alu 1 296 -16 2289 77 37 0 chr20 15784579 15784877 -56369005 + AluY SINE Alu 1 309 -2 214 308 26 26 chr20 15785108 15785186 -56368696 + MIR SINE MIR 20 97 -111 213 222 185 0 chr20 15785548 15785602 -56368280 + L2 LINE L2 3182 3245 -27 1629 171 29 41 chr20 15786106 15786422 -56367460 + AluJo SINE Alu 1 312 0 194 329 66 0 chr20 15787413 15787489 -56366393 + MIR SINE MIR 180 260 -2 339 184 43 57 chr20 15787676 15787817 -56366065 - L1MC4 LINE L1 -1 8041 7903 304 271 56 0 chr20 15787849 15787956 -56365926 - L1MC4 LINE L1 -124 7918 7806 466 197 123 8 chr20 15787991 15788113 -56365769 - MER58C DNA MER1_type 0 215 80 568 291 82 28 chr20 15788207 15788561 -56365321 - L1MC4 LINE L1 -288 7754 7382 188 33 0 33 chr20 15788583 15788613 -56365269 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 383 304 121 34 chr20 15789121 15789328 -56364554 - MIR SINE MIR -17 245 21 2771 182 48 42 chr20 15789398 15790090 -56363792 - L1ME2 LINE L1 -19 6145 5450 189 389 57 64 chr20 15790145 15790302 -56363580 + L2 LINE L2 3101 3256 -16 230 261 15 31 chr20 15790485 15790550 -56363332 - MER5B DNA MER1_type -20 158 95 245 330 20 10 chr20 15790694 15790794 -56363088 - MER5B DNA MER1_type -77 101 1 216 253 11 46 chr20 15791635 15791722 -56362160 + GA-rich Low_complexity Low_complexity 2 85 0 195 204 0 0 chr20 15791734 15791778 -56362104 + (TG)n Simple_repeat Simple_repeat 1 44 0 498 279 25 13 chr20 15791832 15791990 -56361892 - MIR3 SINE MIR -6 202 43 247 247 95 79 chr20 15794281 15794471 -56359411 - MIR SINE MIR -4 258 66 536 191 55 109 chr20 15794477 15794697 -56359185 - MIR SINE MIR -24 238 31 304 375 59 0 chr20 15795489 15795625 -56358257 + MIR3 SINE MIR 65 208 0 1112 194 49 0 chr20 15796452 15796699 -56357183 - MER58B DNA MER1_type -4 337 79 252 249 85 67 chr20 15796794 15796959 -56356923 + MIR3 SINE MIR 34 201 -7 21 0 0 0 chr20 15797584 15797605 -56356277 + AT_rich Low_complexity Low_complexity 1 21 0 844 225 70 12 chr20 15797823 15798067 -56355815 + LTR56 LTR ERV1 188 445 0 270 295 128 45 chr20 15798165 15798524 -56355358 - L1ME LINE L1 -298 5823 5435 2155 109 0 14 chr20 15798609 15798903 -56354979 - AluSc SINE Alu -19 290 1 325 288 69 25 chr20 15798939 15799099 -56354783 - L1ME LINE L1 -820 5326 5160 189 147 0 0 chr20 15799579 15799613 -56354269 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 198 0 0 0 chr20 15799626 15799648 -56354234 + (TGG)n Simple_repeat Simple_repeat 1 22 0 282 290 0 21 chr20 15799900 15800045 -56353837 - L1ME LINE L1 -1549 4597 4456 249 308 62 14 chr20 15800553 15800761 -56353121 - L1ME LINE L1 -2036 4110 3893 73 79 0 0 chr20 15800884 15801048 -56352834 + AT_rich Low_complexity Low_complexity 1 164 0 827 203 11 28 chr20 15801172 15801349 -56352533 + AluJo SINE Alu 121 294 -18 29 84 0 0 chr20 15801823 15801894 -56351988 + AT_rich Low_complexity Low_complexity 1 71 0 374 313 45 45 chr20 15804240 15804419 -56349463 - L2 LINE L2 -92 3221 3043 1874 194 34 17 chr20 15805738 15806208 -56347674 + L1MA4 LINE L1 5815 6292 -8 3067 126 16 16 chr20 15807509 15808018 -56345864 - MER75 DNA T2_type 0 514 6 235 219 252 8 chr20 15808275 15808394 -56345488 + L2 LINE L2 2701 2848 -466 2215 119 0 45 chr20 15809431 15809784 -56344098 + MER1B DNA MER1_type 1 337 0 429 70 0 0 chr20 15812026 15812083 -56341799 + (TA)n Simple_repeat Simple_repeat 2 58 0 254 182 0 61 chr20 15812324 15812390 -56341492 + GA-rich Low_complexity Low_complexity 3 64 0 1918 146 3 0 chr20 15812624 15812953 -56340929 + L1MA9 LINE L1 4721 5050 -1096 1444 130 17 38 chr20 15812942 15813234 -56340648 + L1MA9 LINE L1 5894 6179 -133 * 4941 153 51 15 chr20 15813233 15813514 -56340368 + L1MA9 LINE L1 5032 5301 -1011 243 0 0 0 chr20 15813514 15813541 -56340341 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 4941 153 51 15 chr20 15813541 15814476 -56339406 + L1MA9 LINE L1 5301 6279 -33 27 0 0 0 chr20 15814560 15814587 -56339295 + AT_rich Low_complexity Low_complexity 1 27 0 398 176 0 0 chr20 15814649 15814723 -56339159 + MER116 DNA Mariner 2 75 -5 526 298 106 49 chr20 15815161 15815567 -56338315 + L1MB8 LINE L1 4231 4659 -1487 1805 123 60 23 chr20 15815664 15815965 -56337917 + AluSx SINE Alu 1 312 0 1246 126 11 0 chr20 15816034 15816216 -56337666 + AluSg/x SINE Alu 129 312 0 1865 134 0 33 chr20 15816284 15816624 -56337258 + AluSx SINE Alu 4 312 0 338 297 68 56 chr20 15816974 15817311 -56336571 + L1MB8 LINE L1 5313 5653 -468 313 269 71 43 chr20 15817389 15817530 -56336352 + L1MB8 LINE L1 5776 5920 -258 255 315 0 34 chr20 15817799 15817945 -56335937 - MARNA DNA Mariner -63 523 383 1497 277 93 19 chr20 15818094 15818727 -56335155 - L2 LINE L2 -310 3003 2325 411 239 161 0 chr20 15818736 15818891 -56334991 - L2 LINE L2 -1745 1569 1390 2242 137 133 74 chr20 15818891 15819084 -56334798 + LTR64 LTR ERVK 1 181 -377 3968 149 30 1 chr20 15819084 15819399 -56334483 + L1PB4 LINE L1 5459 5764 -392 213 39 0 0 chr20 15819399 15819425 -56334457 + (CA)n Simple_repeat Simple_repeat 1 26 0 3968 149 30 1 chr20 15819425 15819788 -56334094 + L1PB4 LINE L1 5764 6156 0 2242 137 133 74 chr20 15819788 15819822 -56334060 + LTR64 LTR ERVK 181 212 -346 360 0 0 0 chr20 15819822 15819862 -56334020 + (TAAA)n Simple_repeat Simple_repeat 4 43 0 2242 137 133 74 chr20 15819862 15820160 -56333722 + LTR64 LTR ERVK 212 558 0 637 292 20 0 chr20 15820160 15820362 -56333520 - L2 LINE L2 -1921 1393 1188 229 267 74 91 chr20 15820386 15820562 -56333320 - L2 LINE L2 -2282 1032 860 188 138 0 0 chr20 15820574 15820603 -56333279 + MER5B DNA MER1_type 150 178 0 309 235 15 0 chr20 15820815 15820883 -56332999 - MER5A DNA MER1_type 0 189 121 1139 228 47 16 chr20 15821096 15821416 -56332466 + MER87 LTR ERV1 211 540 -1 546 219 174 13 chr20 15821423 15821578 -56332304 + MER5A DNA MER1_type 10 189 0 561 256 5 111 chr20 15821586 15821785 -56332097 + MER5B DNA MER1_type 1 178 0 2240 121 0 0 chr20 15823199 15823497 -56330385 + AluSg SINE Alu 1 298 -12 1686 150 22 8 chr20 15823522 15823789 -56330093 + AluSx SINE Alu 34 304 -8 630 243 107 83 chr20 15824165 15824539 -56329343 + LTR16A LTR ERVL 55 437 -13 790 336 87 47 chr20 15825335 15826243 -56327639 + L2 LINE L2 2120 3073 -199 12353 85 8 21 chr20 15826252 15828166 -56325716 - L1P3 LINE L1 -4563 1898 2 7768 163 54 6 chr20 15828171 15830597 -56323285 - L1PBa LINE L1 -3016 3846 1300 389 255 21 21 chr20 15831459 15831600 -56322282 + L1MC4 LINE L1 7171 7311 -731 435 249 35 30 chr20 15831709 15831906 -56321976 + L1MC5 LINE L1 7303 7500 -461 983 81 6 25 chr20 15832033 15832194 -56321688 - L1P LINE L1 -3637 2509 2352 360 300 97 4 chr20 15832254 15832481 -56321401 + L1MC4 LINE L1 7795 8042 0 291 299 11 11 chr20 15833387 15833474 -56320408 - L2 LINE L2 -18 3254 3168 369 0 0 0 chr20 15835202 15835243 -56318639 + (TG)n Simple_repeat Simple_repeat 1 41 0 313 305 165 12 chr20 15835425 15835589 -56318293 + MIR SINE MIR 74 262 0 2402 93 0 7 chr20 15835837 15836147 -56317735 + AluSx SINE Alu 1 308 -4 180 350 115 18 chr20 15836385 15836671 -56317211 - L2 LINE L2 -1481 1833 1520 304 263 0 0 chr20 15837152 15837228 -56316654 - MLT2E LTR ERVL 0 628 553 6198 232 68 30 chr20 15837288 15839592 -56314290 + L1M4b LINE L1 21 2560 -4578 2123 90 11 7 chr20 15839592 15839871 -56314011 + AluSc SINE Alu 12 291 -18 6198 232 68 30 chr20 15839871 15840004 -56313878 + L1M4b LINE L1 2560 2686 -4452 324 120 0 0 chr20 15840156 15840206 -56313676 + (CA)n Simple_repeat Simple_repeat 2 51 0 3889 264 65 12 chr20 15840274 15842107 -56311775 + L1M4b LINE L1 2623 4519 -2438 22 0 0 0 chr20 15842172 15842194 -56311688 + AT_rich Low_complexity Low_complexity 1 22 0 354 299 21 21 chr20 15842206 15842350 -56311532 + MLT1I LTR MaLR 68 211 -198 246 212 0 61 chr20 15842451 15842517 -56311365 + MLT1J2 LTR MaLR 389 450 0 866 299 142 22 chr20 15842834 15843370 -56310512 + MLT1L LTR MaLR 5 604 -11 2416 142 32 18 chr20 15843553 15843990 -56309892 - Tigger2 DNA MER2_type -3 2715 2273 346 176 0 15 chr20 15843982 15844050 -56309832 - Tigger2 DNA MER2_type -2651 67 1 * 234 259 0 0 chr20 15845306 15845360 -56308522 + L2 LINE L2 2593 2646 -668 298 213 38 0 chr20 15845583 15845663 -56308219 - L1M3b LINE L1 -4516 1765 1683 301 212 71 0 chr20 15845668 15845753 -56308129 + L1M3b LINE L1 1551 1641 -4640 329 287 53 0 chr20 15845863 15845957 -56307925 + L2 LINE L2 3173 3271 -1 1171 258 97 32 chr20 15846594 15847005 -56306877 + MLT1J1 LTR MaLR 1 438 -8 185 344 16 0 chr20 15848288 15848349 -56305533 - MIR SINE MIR -141 121 60 455 250 9 0 chr20 15848747 15848855 -56305027 - L2 LINE L2 0 3272 3164 866 210 10 15 chr20 15848862 15849062 -56304820 - MER3 DNA MER1_type 0 209 11 826 226 65 0 chr20 15849072 15849258 -56304624 + MER58A DNA MER1_type 27 224 0 260 391 77 10 chr20 15849325 15849532 -56304350 - L2 LINE L2 -180 3092 2872 * 490 242 25 33 chr20 15849529 15849649 -56304233 + L2 LINE L2 3194 3312 -1 187 339 120 10 chr20 15849635 15849827 -56304055 - L2 LINE L2 -445 2869 2657 * 225 246 15 31 chr20 15851284 15851349 -56302533 + MIR SINE MIR 81 144 -64 372 43 0 0 chr20 15852555 15852601 -56301281 + (TG)n Simple_repeat Simple_repeat 1 46 0 203 246 159 0 chr20 15852783 15852852 -56301030 + MIR SINE MIR 62 141 -67 1413 240 23 70 chr20 15853019 15853532 -56300350 - LTR16C LTR ERVL 0 491 3 416 66 0 0 chr20 15853684 15853745 -56300137 + L1P LINE L1 5325 5385 -780 782 228 56 0 chr20 15853854 15854034 -56299848 - MIR SINE MIR -33 229 40 380 163 0 0 chr20 15854844 15854918 -56298964 + L1ME2 LINE L1 6090 6166 0 198 103 0 0 chr20 15855015 15855044 -56298838 + (TAGA)n Simple_repeat Simple_repeat 4 32 0 513 277 19 19 chr20 15855213 15855372 -56298510 + MIR SINE MIR 64 222 -40 826 227 45 119 chr20 15855952 15856689 -56297193 - L2 LINE L2 -1 3312 2640 372 221 54 5 chr20 15856692 15856800 -56297082 + MLT1G LTR MaLR 3 109 -446 * 809 261 28 21 chr20 15856795 15857086 -56296796 + MLT1G LTR MaLR 298 590 0 1950 262 18 77 chr20 15857086 15857574 -56296308 - L2 LINE L2 -671 2643 2215 2342 176 23 59 chr20 15857574 15858098 -56295784 - LTR10B LTR ERV1 0 505 1 1950 262 18 77 chr20 15858098 15858379 -56295503 - L2 LINE L2 -1099 2215 1919 215 294 0 44 chr20 15858406 15858474 -56295408 - L2 LINE L2 -19 3294 3230 478 298 216 10 chr20 15858501 15858709 -56295173 - MIR SINE MIR -1 261 11 25 31 0 0 chr20 15858849 15858881 -56295001 + AT_rich Low_complexity Low_complexity 1 32 0 1389 207 0 58 chr20 15858911 15859206 -56294676 - AluJo SINE Alu -30 282 5 271 258 110 49 chr20 15860080 15860243 -56293639 + Charlie8 DNA MER1_type 2 174 -2243 1055 291 112 13 chr20 15861208 15861703 -56292179 - MLT1G1 LTR MaLR -3 592 5 1439 110 55 5 chr20 15861705 15861924 -56291958 + MER30 DNA MER1_type 1 230 0 604 252 126 18 chr20 15862402 15862624 -56291258 + MIR SINE MIR 16 261 -1 532 292 99 26 chr20 15862851 15863084 -56290798 + MIR SINE MIR 11 260 -2 214 136 17 51 chr20 15863223 15863282 -56290600 + CT-rich Low_complexity Low_complexity 3 59 0 513 324 61 27 chr20 15863642 15864083 -56289799 - L1M4 LINE L1 -1346 4800 4345 1111 285 91 0 chr20 15864496 15864882 -56289000 + LTR16C LTR ERVL 71 491 0 254 273 140 28 chr20 15864993 15865136 -56288746 + L2 LINE L2 2933 3091 -181 720 282 190 35 chr20 15865159 15865674 -56288208 + MLT1G1 LTR MaLR 1 595 0 403 252 161 39 chr20 15866614 15866844 -56287038 + MIR SINE MIR 5 262 0 984 150 67 0 chr20 15870698 15870891 -56282991 + L1MB3 LINE L1 5971 6176 -7 311 211 0 0 chr20 15871046 15871103 -56282779 + MIR SINE MIR 85 141 -121 197 291 10 0 chr20 15872012 15872115 -56281767 + CT-rich Low_complexity Low_complexity 1 104 0 306 273 18 43 chr20 15873043 15873163 -56280719 - MIR SINE MIR -81 127 10 1036 291 71 8 chr20 15873798 15874176 -56279706 + LTR16C LTR ERVL 90 491 0 1860 191 41 59 chr20 15874625 15875053 -56278829 - MLT1D LTR MaLR -2 503 84 1541 148 7 10 chr20 15875053 15875343 -56278539 - L1MA8 LINE L1 -6 6285 5997 1860 191 41 59 chr20 15875343 15875426 -56278456 - MLT1D LTR MaLR -421 84 1 2054 264 31 17 chr20 15875610 15876173 -56277709 - L1ME3A LINE L1 -13 6157 5581 1802 143 60 30 chr20 15876173 15876537 -56277345 + THE1C LTR MaLR 1 375 0 2054 264 31 17 chr20 15876537 15876674 -56277208 - L1ME3A LINE L1 -589 5581 5447 329 203 14 0 chr20 15876702 15876776 -56277106 - L1ME2 LINE L1 -10 6154 6080 761 246 33 24 chr20 15877936 15878147 -56275735 - MLT1J2 LTR MaLR -237 213 1 22 0 0 0 chr20 15879326 15879348 -56274534 + AT_rich Low_complexity Low_complexity 1 22 0 2473 77 3 0 chr20 15879469 15879779 -56274103 + AluY SINE Alu 1 311 0 279 202 45 103 chr20 15880110 15880437 -56273445 + LTR37B LTR ERV1 90 400 -68 562 201 49 83 chr20 15880440 15880704 -56273178 + LTR37B LTR ERV1 210 464 -4 236 289 60 78 chr20 15880765 15880983 -56272899 - MIR SINE MIR -30 232 19 1650 172 18 7 chr20 15881122 15881407 -56272475 - AluJb SINE Alu -24 288 1 225 111 0 48 chr20 15881438 15881501 -56272381 + (CAAAA)n Simple_repeat Simple_repeat 1 60 0 1026 220 83 8 chr20 15882132 15882373 -56271509 - L1ME3A LINE L1 -104 6066 5808 381 43 0 0 chr20 15882442 15882489 -56271393 + (CA)n Simple_repeat Simple_repeat 2 48 0 4407 171 32 35 chr20 15882979 15884067 -56269815 - L1MB8 LINE L1 -1 6177 5099 27 0 0 0 chr20 15885407 15885434 -56268448 + AT_rich Low_complexity Low_complexity 1 27 0 421 215 61 61 chr20 15886959 15887122 -56266760 - LTR45B LTR ERV1 -15 474 312 1368 104 0 0 chr20 15887338 15887520 -56266362 - AluY SINE Alu -1 310 129 2775 253 66 21 chr20 15888564 15889543 -56264339 + L1MB8 LINE L1 3786 4808 -1338 2674 238 52 18 chr20 15889610 15890337 -56263545 + L1MB8 LINE L1 5423 6174 -4 304 218 11 45 chr20 15890491 15890670 -56263212 + (TATAA)n Simple_repeat Simple_repeat 3 175 0 21 36 0 0 chr20 15891856 15891884 -56261998 + AT_rich Low_complexity Low_complexity 1 28 0 1962 229 32 9 chr20 15892391 15892828 -56261054 + MER90 LTR ERV1 3 449 -165 1494 254 8 17 chr20 15892837 15893196 -56260686 + MLT1A1 LTR MaLR 10 365 0 641 200 69 7 chr20 15893199 15893344 -56260538 + MER90 LTR ERV1 448 601 -13 * 1103 158 47 0 chr20 15893341 15893531 -56260351 + MER66A LTR ERV1 278 476 -2 485 253 95 46 chr20 15893614 15893855 -56260027 - MIR SINE MIR 0 262 10 189 266 53 44 chr20 15894865 15894978 -56258904 - MIR SINE MIR -65 143 30 4248 110 28 0 chr20 15895005 15895569 -56258313 - LTR19B LTR ERV1 0 580 1 629 306 53 36 chr20 15895806 15896107 -56257775 + MLT1L LTR MaLR 88 393 -222 276 270 56 11 chr20 15897147 15897236 -56256646 - MIR SINE MIR -50 212 120 492 316 93 9 chr20 15897977 15898192 -56255690 - MIR SINE MIR -10 252 20 2329 174 39 0 chr20 15898393 15898800 -56255082 - MSTA LTR MaLR 0 428 6 3826 147 10 2 chr20 15898805 15899390 -56254492 - MSTA-int LTR MaLR 0 1651 1062 3471 156 11 0 chr20 15899412 15899977 -56253905 - MSTA-int LTR MaLR -1080 571 1 2622 168 26 0 chr20 15899977 15900393 -56253489 - MSTA LTR MaLR 0 428 2 1184 209 63 53 chr20 15902261 15902639 -56251243 - MER66A LTR ERV1 -52 426 45 777 171 44 13 chr20 15903183 15903341 -56250541 + L1ME3A LINE L1 6008 6170 0 212 0 0 35 chr20 15903385 15903414 -56250468 + (CA)n Simple_repeat Simple_repeat 2 29 0 714 288 80 60 chr20 15903984 15904550 -56249332 - MER21B LTR ERV1 -149 714 98 379 265 23 53 chr20 15904527 15904659 -56249223 - MER77 LTR ERV1 -412 193 66 * 938 274 97 42 chr20 15905027 15905480 -56248402 + LTR16C LTR ERVL 4 481 -10 369 0 0 0 chr20 15905660 15905701 -56248181 + (TG)n Simple_repeat Simple_repeat 2 42 0 2069 105 0 14 chr20 15906077 15906388 -56247494 + AluSx SINE Alu 1 307 0 1148 196 94 149 chr20 15908121 15908750 -56245132 - LTR49 LTR ERV1 0 595 2 366 245 38 49 chr20 15908857 15909022 -56244860 + L1MC/D LINE L1 5443 5610 -578 1158 99 0 0 chr20 15909026 15909178 -56244704 + AluSp/q SINE Alu 162 313 0 325 207 37 0 chr20 15909212 15909294 -56244588 + MIR SINE MIR 124 208 -54 22 0 0 0 chr20 15909457 15909479 -56244403 + AT_rich Low_complexity Low_complexity 1 22 0 216 0 0 0 chr20 15910226 15910250 -56243632 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 23 33 0 0 chr20 15910671 15910701 -56243181 + AT_rich Low_complexity Low_complexity 1 30 0 1791 203 22 75 chr20 15911193 15911646 -56242236 - LTR65 LTR ERV1 -2 667 239 1344 184 24 12 chr20 15911651 15911906 -56241976 + MLT1E2 LTR MaLR 312 569 -57 1313 161 28 4 chr20 15911944 15912192 -56241690 - LTR65 LTR ERV1 -415 254 1 537 273 29 35 chr20 15912219 15912391 -56241491 - MIR SINE MIR -63 199 29 539 303 80 11 chr20 15912660 15912848 -56241034 - MIR SINE MIR -57 205 5 601 343 101 32 chr20 15914004 15914511 -56239371 - LTR67 LTR ERVL -14 543 2 392 228 13 162 chr20 15914704 15914764 -56239118 - MIR SINE MIR -13 249 182 1986 113 3 17 chr20 15914764 15915090 -56238792 - AluSg SINE Alu 0 310 1 392 228 13 162 chr20 15915090 15915307 -56238575 - MIR SINE MIR -80 182 14 2226 187 83 29 chr20 15915772 15915817 -56238065 - MLT2B1 LTR ERVL 0 520 479 6764 150 51 21 chr20 15915817 15916124 -56237758 - Tigger3b DNA MER2_type -1797 1231 935 2387 78 3 19 chr20 15916124 15916433 -56237449 + AluSp SINE Alu 1 304 -9 6764 150 51 21 chr20 15916433 15916742 -56237140 - Tigger3b DNA MER2_type -2093 935 637 1825 135 4 0 chr20 15916742 15917021 -56236861 - AluSx SINE Alu 0 314 35 6764 150 51 21 chr20 15917021 15917596 -56236286 - Tigger3b DNA MER2_type -2391 637 2 2226 187 83 29 chr20 15917596 15918041 -56235841 - MLT2B1 LTR ERVL -41 479 3 3400 144 29 18 chr20 15918694 15919251 -56234631 + L1PB4 LINE L1 5583 6145 -11 225 0 48 48 chr20 15919251 15919293 -56234589 + (TTTTTG)n Simple_repeat Simple_repeat 2 43 0 1752 151 20 17 chr20 15919489 15919781 -56234101 - AluJo SINE Alu -19 293 1 808 178 0 22 chr20 15920154 15920289 -56233593 + FLAM_C SINE Alu 1 132 -1 400 238 33 25 chr20 15921274 15921396 -56232486 - L2 LINE L2 0 3313 3191 5602 147 21 32 chr20 15921750 15921787 -56232095 + L1MA9 LINE L1 5298 5334 -978 2149 113 3 0 chr20 15921787 15922078 -56231804 + AluSx SINE Alu 1 292 -20 5602 147 21 32 chr20 15922078 15923065 -56230817 + L1MA9 LINE L1 5334 6311 -1 196 143 36 0 chr20 15923067 15923123 -56230759 + (TCTA)n Simple_repeat Simple_repeat 3 60 0 1059 242 141 44 chr20 15923128 15923643 -56230239 + MLT1F LTR MaLR 40 542 0 462 294 103 33 chr20 15923730 15923914 -56229968 - MIR SINE MIR 0 262 66 239 282 45 64 chr20 15924190 15924300 -56229582 + L2 LINE L2 3188 3295 -18 1635 127 0 26 chr20 15924373 15924641 -56229241 + Tigger7 DNA MER2_type 2225 2485 -6 248 238 79 0 chr20 15924662 15924725 -56229157 + L2 LINE L2 3201 3268 -4 334 225 132 31 chr20 15925211 15925340 -56228542 - MIR3 SINE MIR -35 173 32 1372 217 96 28 chr20 15926188 15926575 -56227307 - LTR16C LTR ERVL -8 483 71 1945 185 112 28 chr20 15926620 15927084 -56226798 - MLT1D LTR MaLR -2 503 1 245 253 83 41 chr20 15928516 15928653 -56225229 - MIR3 SINE MIR -11 197 48 438 272 52 29 chr20 15929146 15929319 -56224563 + L2 LINE L2 3096 3272 0 212 218 51 39 chr20 15930162 15930240 -56223642 + MIR3 SINE MIR 3 81 -127 325 254 69 34 chr20 15930338 15930597 -56223285 + MLT1H LTR MaLR 98 527 -22 2811 73 3 0 chr20 15930604 15930958 -56222924 - THE1A LTR MaLR 0 355 1 2797 204 99 21 chr20 15931032 15931904 -56221978 - L1ME2 LINE L1 -11 6948 6009 1017 270 58 40 chr20 15931905 15932847 -56221035 - L1ME2 LINE L1 -3603 3338 2416 267 224 68 50 chr20 15932863 15933024 -56220858 - L1ME2 LINE L1 -6178 245 82 1957 127 21 3 chr20 15933091 15933404 -56220478 - AluSx SINE Alu 0 312 1 200 333 0 0 chr20 15934053 15934116 -56219766 + L2 LINE L2 3209 3271 -1 283 308 94 39 chr20 15934384 15934618 -56219264 + LTR16C LTR ERVL 193 439 -52 1425 207 96 6 chr20 15934674 15935017 -56218865 + MLT1F1 LTR MaLR 194 567 0 519 354 42 0 chr20 15935124 15935361 -56218521 + MIR SINE MIR 16 262 0 3048 102 22 2 chr20 15936841 15937302 -56216580 - L1MA1 LINE L1 0 6302 5833 396 258 75 8 chr20 15938306 15938426 -56215456 - MIR SINE MIR -12 250 123 478 341 24 6 chr20 15938568 15938738 -56215144 + MIR SINE MIR 26 198 -64 188 135 27 0 chr20 15939774 15939811 -56214071 + CT-rich Low_complexity Low_complexity 2 39 0 274 319 80 55 chr20 15940745 15940908 -56212974 - MIR SINE MIR -7 255 89 213 250 204 11 chr20 15940927 15941015 -56212867 + MIR3 SINE MIR 54 158 -50 180 97 0 0 chr20 15941280 15941311 -56212571 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 213 384 20 10 chr20 15942459 15942558 -56211324 + L2 LINE L2 1495 1594 -1720 859 354 65 23 chr20 15942600 15943264 -56210618 + L2 LINE L2 1938 2629 -685 309 321 137 0 chr20 15944123 15944291 -56209591 - L3 LINE CR1 -343 1234 1044 680 35 11 0 chr20 15944353 15944440 -56209442 + (TCTA)n Simple_repeat Simple_repeat 3 90 0 369 261 22 11 chr20 15944694 15944786 -56209096 - L2 LINE L2 -12 3301 3209 21 36 0 0 chr20 15945310 15945338 -56208544 + AT_rich Low_complexity Low_complexity 1 28 0 229 200 0 0 chr20 15947082 15947122 -56206760 - L2 LINE L2 -8 3305 3266 182 105 26 0 chr20 15947256 15947294 -56206588 + CT-rich Low_complexity Low_complexity 2 40 0 303 326 0 0 chr20 15947303 15947392 -56206490 - L1MC4 LINE L1 -1340 6702 6614 237 211 0 0 chr20 15947394 15947446 -56206436 + (TA)n Simple_repeat Simple_repeat 2 53 0 204 40 0 0 chr20 15947446 15947471 -56206411 + (CA)n Simple_repeat Simple_repeat 2 26 0 571 277 6 24 chr20 15948278 15948444 -56205438 + MLT2F LTR ERVL 371 533 -130 378 0 0 0 chr20 15948452 15948494 -56205388 + (CA)n Simple_repeat Simple_repeat 2 43 0 467 199 397 6 chr20 15949620 15949776 -56204106 - MIR SINE MIR -23 239 23 231 224 0 0 chr20 15950045 15950094 -56203788 + L2 LINE L2 3263 3311 -2 397 324 7 14 chr20 15951092 15951237 -56202645 + MIR3 SINE MIR 40 183 -25 22 0 0 0 chr20 15952457 15952479 -56201403 + AT_rich Low_complexity Low_complexity 1 22 0 1982 284 70 15 chr20 15953571 15954414 -56199468 - L1ME3A LINE L1 -5 6165 5277 366 273 0 8 chr20 15954416 15954544 -56199338 - L1ME3A LINE L1 -896 5250 5124 22 35 0 0 chr20 15955079 15955108 -56198774 + AT_rich Low_complexity Low_complexity 1 29 0 28 0 0 0 chr20 15955142 15955170 -56198712 + AT_rich Low_complexity Low_complexity 1 28 0 542 347 66 20 chr20 15956361 15956770 -56197112 + LTR16B LTR ERVL 35 462 -2 1164 332 49 26 chr20 15958867 15959656 -56194226 - L2 LINE L2 -2 3311 2494 30 69 0 0 chr20 15960165 15960223 -56193659 + AT_rich Low_complexity Low_complexity 1 58 0 242 328 76 8 chr20 15960394 15960525 -56193357 + MIR SINE MIR 53 192 -70 822 204 26 87 chr20 15960685 15960916 -56192966 + MER20 DNA MER1_type 3 219 0 265 228 120 43 chr20 15961122 15961214 -56192668 + MLT1I LTR MaLR 73 171 -238 275 223 89 80 chr20 15961362 15961474 -56192408 + MLT1H LTR MaLR 421 533 -16 296 94 19 0 chr20 15961898 15961951 -56191931 + (CAAAC)n Simple_repeat Simple_repeat 1 54 0 2287 81 0 0 chr20 15962585 15962900 -56190982 + AluY SINE Alu 1 315 0 3389 210 50 19 chr20 15962982 15963578 -56190304 - L1MD1 LINE L1 -141 6495 5919 4979 93 100 13 chr20 15963578 15964338 -56189544 - LTR12 LTR ERV1 0 826 1 3389 210 50 19 chr20 15964338 15964873 -56189009 - L1MD1 LINE L1 -717 5919 5336 6791 176 10 1 chr20 15964911 15966993 -56186889 - L1PA13 LINE L1 0 6163 4055 1574 247 42 27 chr20 15967000 15967665 -56186217 - L1MD1 LINE L1 -1198 5342 4668 225 284 29 48 chr20 15967671 15967879 -56186003 - L1MD1 LINE L1 -2542 3998 3795 1842 225 35 67 chr20 15967946 15968510 -56185372 + MLT2B3 LTR ERVL 1 546 -8 2067 254 87 13 chr20 15968512 15969535 -56184347 - L1MD1 LINE L1 -2897 3643 2516 1178 241 103 0 chr20 15969526 15969874 -56184008 - L1MD1 LINE L1 -6129 411 28 * 364 330 126 5 chr20 15969892 15970098 -56183784 + MIR SINE MIR 31 261 -1 235 319 0 0 chr20 15970099 15970171 -56183711 + (TTA)n Simple_repeat Simple_repeat 2 73 0 285 303 0 0 chr20 15971318 15971384 -56182498 + MIR SINE MIR 123 188 -74 276 193 42 32 chr20 15972755 15972850 -56181032 + MIR SINE MIR 86 183 -63 267 304 14 81 chr20 15973328 15973476 -56180406 - MIR SINE MIR -14 248 111 768 272 86 13 chr20 15974734 15974966 -56178916 - MIR SINE MIR -10 252 4 305 301 0 53 chr20 15975008 15975121 -56178761 + MIR SINE MIR 128 234 -28 240 35 0 0 chr20 15975186 15975215 -56178667 + (ATG)n Simple_repeat Simple_repeat 1 29 0 223 341 119 8 chr20 15977461 15977587 -56176295 + MIR SINE MIR 21 160 -102 21 36 0 0 chr20 15977624 15977652 -56176230 + AT_rich Low_complexity Low_complexity 1 28 0 232 196 0 22 chr20 15977653 15977699 -56176183 - MIR SINE MIR -1 261 217 352 325 63 16 chr20 15977709 15977900 -56175982 - L1ME3A LINE L1 -1 6169 5970 1104 132 13 0 chr20 15977974 15978133 -56175749 - AluSg/x SINE Alu -17 295 135 441 117 0 0 chr20 15978133 15978193 -56175689 - AluSq SINE Alu -111 202 143 1460 122 0 24 chr20 15978193 15978406 -56175476 - AluSq SINE Alu -103 210 3 1317 283 50 25 chr20 15978407 15979256 -56174626 - L1ME3A LINE L1 -213 5949 5083 261 0 0 0 chr20 15979567 15979596 -56174286 + (CA)n Simple_repeat Simple_repeat 1 29 0 361 321 105 12 chr20 15979928 15980090 -56173792 - MIR3 SINE MIR -11 197 21 22 70 0 0 chr20 15980259 15980302 -56173580 + AT_rich Low_complexity Low_complexity 1 43 0 2014 229 35 43 chr20 15980318 15980946 -56172936 + L1ME3A LINE L1 5318 5940 -230 1148 216 4 13 chr20 15980952 15981183 -56172699 - MER8 DNA MER2_type 0 239 11 394 202 92 140 chr20 15981193 15981421 -56172461 + L1ME3A LINE L1 5954 6170 0 304 258 101 25 chr20 15982081 15982240 -56171642 - MIR SINE MIR -72 190 20 285 196 22 11 chr20 15982963 15983055 -56170827 + (CA)n Simple_repeat Simple_repeat 1 93 0 401 286 9 0 chr20 15983084 15983189 -56170693 + MIR SINE MIR 34 139 -123 342 324 58 10 chr20 15983339 15983546 -56170336 + L3 LINE CR1 1308 1524 -53 379 339 119 0 chr20 15983943 15984111 -56169771 + LTR16C LTR ERVL 65 252 -239 354 289 16 8 chr20 15984112 15984233 -56169649 + LTR16C LTR ERVL 367 488 -3 237 245 75 43 chr20 15984382 15984476 -56169406 + L2 LINE L2 3163 3259 -13 1012 275 33 15 chr20 15984627 15985023 -56168859 - L1ME3A LINE L1 -189 5981 5579 1331 209 74 3 chr20 15985071 15985187 -56168695 + AluJo SINE Alu 1 107 -205 513 28 56 28 chr20 15985187 15985294 -56168588 + (TA)n Simple_repeat Simple_repeat 2 111 0 1331 209 74 3 chr20 15985294 15985460 -56168422 + AluJo SINE Alu 107 303 -9 30 45 0 0 chr20 15985469 15985513 -56168369 + AT_rich Low_complexity Low_complexity 1 44 0 276 317 21 49 chr20 15985692 15985834 -56168048 - LTR16C LTR ERVL -281 210 73 24 0 0 0 chr20 15986425 15986449 -56167433 + AT_rich Low_complexity Low_complexity 1 24 0 246 62 0 0 chr20 15987297 15987329 -56166553 + (CA)n Simple_repeat Simple_repeat 1 32 0 816 200 0 0 chr20 15987330 15987475 -56166407 + MER82 DNA MER2_type 2 146 -507 1870 237 11 26 chr20 15987909 15988364 -56165518 + MER82 DNA MER2_type 200 647 -6 339 325 45 13 chr20 15988666 15988823 -56165059 + MIR SINE MIR 51 212 -50 325 280 110 0 chr20 15988992 15989092 -56164790 + MLT1I LTR MaLR 232 342 -67 196 250 136 45 chr20 15989510 15989598 -56164284 - L2 LINE L2 -300 2972 2877 532 273 91 6 chr20 15990603 15990779 -56163103 + MIR SINE MIR 72 262 0 405 228 73 49 chr20 15990775 15990898 -56162984 - MIR SINE MIR -64 198 73 * 358 323 115 38 chr20 15991084 15991449 -56162433 - L1ME2 LINE L1 -259 5905 5510 2573 47 0 0 chr20 15991701 15991998 -56161884 - AluY SINE Alu -8 303 7 230 176 33 22 chr20 15993092 15993183 -56160699 + (CATA)n Simple_repeat Simple_repeat 3 94 0 314 168 9 28 chr20 15993230 15993337 -56160545 + (CA)n Simple_repeat Simple_repeat 2 106 0 326 212 0 12 chr20 15994377 15994462 -56159420 + CT-rich Low_complexity Low_complexity 2 85 0 404 341 145 21 chr20 15995193 15995677 -56158205 + MLT1K LTR MaLR 3 546 -42 317 327 176 7 chr20 15995898 15996051 -56157831 - MER5A DNA MER1_type 0 189 11 376 230 73 79 chr20 15998374 15998552 -56155330 + MIR3 SINE MIR 32 208 0 * 769 291 90 67 chr20 15998541 15999326 -56154556 + L2 LINE L2 2471 3293 -20 1817 82 19 11 chr20 15999332 15999599 -56154283 + L1PA8A LINE L1 5835 6103 -28 830 269 61 19 chr20 15999981 16000293 -56153589 + LTR16C LTR ERVL 161 485 -6 593 284 87 29 chr20 16000482 16000690 -56153192 + MIR SINE MIR 22 241 -21 4760 174 45 21 chr20 16001262 16001328 -56152554 - L1MA9 LINE L1 -3 6309 6246 236 30 30 0 chr20 16001328 16001361 -56152521 + (TA)n Simple_repeat Simple_repeat 1 34 0 4760 174 45 21 chr20 16001361 16001415 -56152467 - L1MA9 LINE L1 -66 6246 6195 192 77 0 0 chr20 16001415 16001441 -56152441 + (TG)n Simple_repeat Simple_repeat 1 26 0 4760 174 45 21 chr20 16001441 16002425 -56151457 - L1MA9 LINE L1 -117 6195 5237 1685 168 32 0 chr20 16002425 16002705 -56151177 - AluSx SINE Alu -9 303 15 4760 174 45 21 chr20 16002705 16002823 -56151059 - L1MA9 LINE L1 -1075 5237 5123 7427 37 3 0 chr20 16002823 16003903 -56149979 + L1PA4 LINE L1 5071 6153 -2 4760 174 45 21 chr20 16003903 16004165 -56149717 - L1MA9 LINE L1 -1189 5123 4787 2182 167 56 31 chr20 16004767 16005181 -56148701 - MSTB LTR MaLR -2 424 1 439 317 25 50 chr20 16006036 16006235 -56147647 + MIR SINE MIR 66 259 -3 592 233 0 0 chr20 16006863 16006979 -56146903 + MER45A DNA AcHobo 35 150 -28 8801 190 63 16 chr20 16007299 16009185 -56144697 - L1MA4A LINE L1 -5 7000 4870 2268 57 64 0 chr20 16009185 16009466 -56144416 - AluY SINE Alu -11 300 2 8801 190 63 16 chr20 16009466 16010960 -56142922 - L1MA4A LINE L1 -2135 4870 3448 1568 128 0 9 chr20 16010962 16011180 -56142702 - AluSg/x SINE Alu -24 288 73 3194 263 99 42 chr20 16011180 16013751 -56140131 - L1MA4A LINE L1 -4083 2766 6 1945 82 0 4 chr20 16014344 16014600 -56139282 - AluY SINE Alu -1 310 56 41151 31 21 1 chr20 16014883 16020910 -56132972 + L1HS LINE L1 4 6153 -2 197 393 11 0 chr20 16020956 16021045 -56132837 + L2 LINE L2 2698 2787 -527 348 258 11 22 chr20 16021184 16021273 -56132609 + L2 LINE L2 3170 3257 -15 4320 112 3 8 chr20 16021353 16021968 -56131914 + LTR9 LTR ERV1 1 612 0 32 26 0 0 chr20 16022092 16022131 -56131751 + AT_rich Low_complexity Low_complexity 1 39 0 571 138 37 28 chr20 16022274 16022383 -56131499 + MSTC LTR MaLR 1 110 -318 2435 71 0 10 chr20 16022416 16022725 -56131157 - AluY SINE Alu -5 306 1 784 215 45 6 chr20 16022780 16022957 -56130925 + MIR SINE MIR 66 249 -13 231 36 0 0 chr20 16022959 16022987 -56130895 + (TTA)n Simple_repeat Simple_repeat 2 29 0 200 311 73 53 chr20 16023641 16023792 -56130090 - L2 LINE L2 -21 3292 3139 243 272 11 43 chr20 16024871 16024963 -56128919 + L1ME1 LINE L1 5915 6003 -163 587 191 19 19 chr20 16024965 16025127 -56128755 + L1MA10 LINE L1 6171 6332 -2 2041 101 40 3 chr20 16025136 16025434 -56128448 + AluSp SINE Alu 1 309 -4 23 33 0 0 chr20 16025566 16025596 -56128286 + AT_rich Low_complexity Low_complexity 1 30 0 2134 165 64 2 chr20 16027265 16027672 -56126210 + LTR32 LTR ERVL 6 437 -34 1280 258 45 24 chr20 16027673 16028138 -56125744 - L1ME3A LINE L1 -28 6142 5668 504 226 72 32 chr20 16028149 16028370 -56125512 - L1ME3A LINE L1 -765 5381 5152 2453 146 36 10 chr20 16028497 16028914 -56124968 + MSTA LTR MaLR 1 428 0 1123 194 115 3 chr20 16029653 16029941 -56123941 + MER33 DNA MER1_type 1 320 -4 258 81 0 0 chr20 16030040 16030077 -56123805 + (CA)n Simple_repeat Simple_repeat 2 38 0 384 246 18 9 chr20 16030593 16030703 -56123179 - MIR SINE MIR -35 227 117 2006 166 79 20 chr20 16030722 16031125 -56122757 + MSTC LTR MaLR 2 428 0 566 152 0 10 chr20 16031925 16032024 -56121858 + MER4A LTR ERV1 1 98 -566 1663 151 6 22 chr20 16032024 16032375 -56121507 + MER4A LTR ERV1 261 664 0 2069 124 32 24 chr20 16034263 16034633 -56119249 - THE1C LTR MaLR -2 373 1 783 257 87 18 chr20 16035272 16035746 -56118136 + L1ME3A LINE L1 5535 6068 -102 361 86 17 0 chr20 16035756 16035814 -56118068 + MADE1 DNA Mariner 22 80 0 386 235 0 20 chr20 16035817 16035919 -56117963 + L1ME3A LINE L1 6071 6170 0 264 350 29 44 chr20 16036001 16036138 -56117744 - L2 LINE L2 -2 3270 3136 407 295 92 29 chr20 16036657 16036830 -56117052 - MIR SINE MIR -44 218 35 332 339 29 12 chr20 16037812 16037983 -56115899 - MLT1H LTR MaLR -373 176 3 582 335 27 48 chr20 16038927 16039303 -56114579 + LTR16C LTR ERVL 99 466 -25 250 369 107 13 chr20 16039342 16039651 -56114231 + L2 LINE L2 1906 2243 -1071 779 226 72 0 chr20 16039713 16039908 -56113974 + MER3 DNA MER1_type 1 209 0 186 333 0 0 chr20 16039950 16039998 -56113884 + MIR SINE MIR 103 150 -58 333 348 117 20 chr20 16040080 16040389 -56113493 + L1M4 LINE L1 4681 5039 -1107 6035 106 11 8 chr20 16040389 16041548 -56112334 + L1PA13 LINE L1 4999 6161 -2 333 348 117 20 chr20 16041548 16041640 -56112242 + L1M4 LINE L1 5039 5121 -1025 242 267 0 0 chr20 16041702 16041762 -56112120 - L2 LINE L2 -72 3241 3182 406 270 10 0 chr20 16041797 16041897 -56111985 - MER94 DNA DNA -33 101 1 43 47 0 0 chr20 16042179 16042243 -56111639 + AT_rich Low_complexity Low_complexity 1 64 0 409 290 63 54 chr20 16042311 16042407 -56111475 - L1MC/D LINE L1 -302 5819 5725 1436 231 110 79 chr20 16042407 16043014 -56110868 + MLT1E2 LTR MaLR 1 626 0 409 290 63 54 chr20 16043014 16043462 -56110420 - L1MC/D LINE L1 -396 5725 5332 324 223 62 9 chr20 16044083 16044195 -56109687 - L1MC4 LINE L1 -2 8040 7923 1823 142 15 89 chr20 16044334 16044729 -56109153 - MER47A DNA MER2_type 0 366 1 667 239 77 32 chr20 16044741 16044988 -56108894 - L1ME2 LINE L1 -12 6152 5895 693 136 57 0 chr20 16047343 16047483 -56106399 + Charlie5 DNA MER1_type 2471 2618 0 269 218 36 0 chr20 16047497 16047552 -56106330 + MER58 DNA MER1_type 1 57 -158 * 334 203 0 0 chr20 16047549 16047613 -56106269 + MER58 DNA MER1_type 172 235 -2185 753 317 85 17 chr20 16048138 16048548 -56105334 + L2 LINE L2 1372 1809 -1505 3512 118 11 0 chr20 16048548 16049214 -56104668 + L1PB1 LINE L1 5120 5791 -360 216 114 24 73 chr20 16049218 16049341 -56104541 + (TA)n Simple_repeat Simple_repeat 1 117 0 2459 88 11 32 chr20 16049348 16049539 -56104343 + L1PB1 LINE L1 5782 5976 -175 2084 72 7 11 chr20 16049539 16049818 -56104064 + AluY SINE Alu 21 298 -13 207 0 0 0 chr20 16049818 16049841 -56104041 + (TA)n Simple_repeat Simple_repeat 1 23 0 2459 88 11 32 chr20 16049841 16050025 -56103857 + L1PB1 LINE L1 5974 6150 -1 1775 294 60 21 chr20 16050038 16050750 -56103132 + L2 LINE L2 1794 2533 -781 268 232 13 197 chr20 16050827 16051060 -56102822 + L2 LINE L2 3032 3221 -92 5771 116 15 8 chr20 16051121 16052937 -56100945 - L1PA13 LINE L1 -11 6152 4328 1254 212 48 15 chr20 16052937 16053267 -56100615 - MER63 DNA MER1_type -36 1025 685 222 291 58 23 chr20 16053267 16053353 -56100529 - MIR SINE MIR -152 110 22 2466 70 3 0 chr20 16053522 16053823 -56100059 + AluSx SINE Alu 1 302 -10 406 333 0 58 chr20 16054794 16054858 -56099024 + MIR SINE MIR 57 123 -139 234 0 0 0 chr20 16054858 16054884 -56098998 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1713 139 3 51 chr20 16054886 16055181 -56098701 - AluSx SINE Alu -31 281 1 406 333 0 58 chr20 16055181 16055320 -56098562 + MIR SINE MIR 124 251 -11 323 268 72 13 chr20 16055619 16055772 -56098110 + L1MC/D LINE L1 4915 5076 -1070 385 299 60 43 chr20 16056125 16056426 -56097456 + L1MC/D LINE L1 5510 5815 -1993 1202 276 49 56 chr20 16056988 16057871 -56096011 - L2 LINE L2 0 3313 2427 186 43 0 0 chr20 16059295 16059318 -56094564 + (T)n Simple_repeat Simple_repeat 1 23 0 292 320 108 26 chr20 16060033 16060227 -56093655 + MIR SINE MIR 1 210 -52 809 261 28 21 chr20 16061297 16061588 -56092294 + MLT1G LTR MaLR 298 590 0 1950 262 18 77 chr20 16061588 16062076 -56091806 - L2 LINE L2 -671 2643 2215 2370 176 25 59 chr20 16062076 16062599 -56091283 - LTR10B LTR ERV1 0 505 1 1950 262 18 77 chr20 16062599 16062880 -56091002 - L2 LINE L2 -1099 2215 1919 215 294 0 44 chr20 16062907 16062975 -56090907 - L2 LINE L2 -19 3294 3230 454 303 216 10 chr20 16063002 16063210 -56090672 - MIR SINE MIR -1 261 11 25 31 0 0 chr20 16063350 16063382 -56090500 + AT_rich Low_complexity Low_complexity 1 32 0 1395 208 0 54 chr20 16063412 16063706 -56090176 - AluJo SINE Alu -30 282 5 271 258 110 49 chr20 16064580 16064743 -56089139 + Charlie8 DNA MER1_type 2 174 -2243 1055 291 112 13 chr20 16065708 16066203 -56087679 - MLT1G1 LTR MaLR -3 592 5 1439 110 55 5 chr20 16066205 16066424 -56087458 + MER30 DNA MER1_type 1 230 0 604 252 126 18 chr20 16066902 16067124 -56086758 + MIR SINE MIR 16 261 -1 532 292 99 26 chr20 16067351 16067584 -56086298 + MIR SINE MIR 11 260 -2 214 136 17 51 chr20 16067723 16067782 -56086100 + CT-rich Low_complexity Low_complexity 3 59 0 513 324 61 27 chr20 16068142 16068583 -56085299 - L1M4 LINE L1 -1346 4800 4345 1098 293 91 0 chr20 16068996 16069382 -56084500 + LTR16C LTR ERVL 71 491 0 254 273 140 28 chr20 16069493 16069636 -56084246 + L2 LINE L2 2933 3091 -181 707 256 153 32 chr20 16069659 16070174 -56083708 + MLT1H LTR MaLR 1 595 0 403 252 161 39 chr20 16071114 16071344 -56082538 + MIR SINE MIR 5 262 0 984 150 67 0 chr20 16075200 16075393 -56078489 + L1MB3 LINE L1 5971 6176 -7 311 211 0 0 chr20 16075548 16075605 -56078277 + MIR SINE MIR 85 141 -121 197 291 10 0 chr20 16076514 16076617 -56077265 + CT-rich Low_complexity Low_complexity 1 104 0 306 273 18 43 chr20 16077548 16077668 -56076214 - MIR SINE MIR -81 127 10 1036 291 71 8 chr20 16078303 16078681 -56075201 + LTR16C LTR ERVL 90 491 0 1860 191 41 59 chr20 16079130 16079558 -56074324 - MLT1D LTR MaLR -2 503 84 1541 148 7 10 chr20 16079558 16079848 -56074034 - L1MA8 LINE L1 -6 6285 5997 1860 191 41 59 chr20 16079848 16079931 -56073951 - MLT1D LTR MaLR -421 84 1 2072 250 34 32 chr20 16080115 16080679 -56073203 - L1ME3A LINE L1 -13 6157 5591 1787 146 60 30 chr20 16080679 16081043 -56072839 + THE1C LTR MaLR 1 375 0 2072 250 34 32 chr20 16081043 16081208 -56072674 - L1ME3A LINE L1 -579 5591 5428 350 203 14 0 chr20 16081207 16081281 -56072601 - L1ME2 LINE L1 -10 6154 6080 * 748 246 33 24 chr20 16082441 16082652 -56071230 - MLT1J2 LTR MaLR -237 213 1 207 0 0 0 chr20 16083831 16083854 -56070028 + (T)n Simple_repeat Simple_repeat 1 23 0 2453 75 3 0 chr20 16083979 16084287 -56069595 + AluY SINE Alu 1 309 -2 255 202 45 103 chr20 16084621 16084948 -56068934 + LTR37A LTR ERV1 90 400 -68 517 199 50 84 chr20 16084953 16085215 -56068667 + LTR37B LTR ERV1 212 464 -4 260 289 60 78 chr20 16085276 16085494 -56068388 - MIR SINE MIR -30 232 19 1649 172 18 7 chr20 16085633 16085918 -56067964 - AluJb SINE Alu -24 288 1 225 111 0 48 chr20 16085949 16086012 -56067870 + (CAAAA)n Simple_repeat Simple_repeat 1 60 0 997 220 83 8 chr20 16086643 16086884 -56066998 - L1ME3A LINE L1 -104 6066 5808 363 44 0 0 chr20 16086953 16086998 -56066884 + (CA)n Simple_repeat Simple_repeat 2 46 0 4265 170 32 35 chr20 16087488 16088576 -56065306 - L1MB8 LINE L1 -1 6177 5098 385 230 18 44 chr20 16089236 16089349 -56064533 + MIR SINE MIR 83 192 -70 250 188 16 62 chr20 16089516 16089580 -56064302 + MIR SINE MIR 157 217 -45 399 211 26 0 chr20 16089843 16089919 -56063963 + MIR SINE MIR 44 121 -87 564 263 68 10 chr20 16090238 16090443 -56063439 - L1ME3A LINE L1 -10 6160 5944 271 284 128 0 chr20 16090537 16090639 -56063243 + L1ME LINE L1 5547 5661 -460 376 173 0 0 chr20 16091121 16091196 -56062686 + L1MA4 LINE L1 6101 6175 -125 * 381 291 33 95 chr20 16091195 16091625 -56062257 + L1MC4a LINE L1 5536 5938 -183 2128 112 0 7 chr20 16091792 16092118 -56061764 + AluSq SINE Alu 1 324 0 386 225 27 63 chr20 16093481 16093592 -56060290 - MIR SINE MIR -82 180 74 2137 92 7 33 chr20 16094319 16094623 -56059259 - AluY SINE Alu -15 296 1 364 200 47 35 chr20 16096309 16096394 -56057488 + MIR3 SINE MIR 115 200 -8 2139 109 0 57 chr20 16096665 16096996 -56056886 + AluSx SINE Alu 1 312 0 590 265 58 9 chr20 16097078 16097301 -56056581 + L1MA9 LINE L1 6039 6272 -40 275 305 76 9 chr20 16097472 16097577 -56056305 + MIR SINE MIR 31 142 -120 372 317 69 7 chr20 16098402 16098547 -56055335 - MIR3 SINE MIR -52 156 3 405 179 84 0 chr20 16099035 16099130 -56054752 + MER3 DNA MER1_type 90 192 -17 242 200 0 0 chr20 16099104 16099154 -56054728 - MER3 DNA MER1_type -119 90 41 * 349 188 225 0 chr20 16099290 16099370 -56054512 - MER3 DNA MER1_type -111 98 1 22 0 0 0 chr20 16099472 16099494 -56054388 + AT_rich Low_complexity Low_complexity 1 22 0 808 316 49 35 chr20 16099661 16100151 -56053731 + L1ME3A LINE L1 264 760 -5359 851 292 65 50 chr20 16100164 16100760 -56053122 + L1ME3A LINE L1 3328 3932 -2197 619 294 68 31 chr20 16100795 16101556 -56052326 + L1ME3A LINE L1 4022 4810 -1319 227 219 76 91 chr20 16101598 16101753 -56052129 - MLT1J2 LTR MaLR -1 408 239 1065 282 72 34 chr20 16102057 16102667 -56051215 + L1ME3A LINE L1 5303 5939 -214 524 78 39 0 chr20 16103103 16103180 -56050702 - MADE1 DNA Mariner 0 80 1 474 18 0 0 chr20 16103270 16103325 -56050557 + (TC)n Simple_repeat Simple_repeat 2 56 0 324 0 0 0 chr20 16103324 16103360 -56050522 + (TG)n Simple_repeat Simple_repeat 1 36 0 * 386 269 155 16 chr20 16103418 16103727 -56050155 + HAL1 LINE L1 996 1347 -1160 1224 87 0 0 chr20 16103907 16104128 -56049754 + (TCCA)n Simple_repeat Simple_repeat 1 221 0 226 312 64 46 chr20 16104357 16104530 -56049352 - L1MC/D LINE L1 -1907 5901 5726 1773 236 69 47 chr20 16105602 16106237 -56047645 - L1ME2 LINE L1 -30 6134 5486 192 265 78 91 chr20 16106438 16106668 -56047214 + L2 LINE L2 2809 3035 -237 184 255 0 0 chr20 16106842 16106889 -56046993 + L2 LINE L2 3226 3272 0 463 196 10 10 chr20 16107258 16107355 -56046527 - Charlie1b DNA MER1_type 0 523 427 1129 194 74 19 chr20 16107355 16107613 -56046269 - Charlie1b DNA MER1_type -251 272 1 1731 236 111 36 chr20 16107969 16108681 -56045201 + MER20B DNA MER1_type 6 770 -13 7762 162 7 9 chr20 16108834 16111319 -56042563 + L1PB1 LINE L1 3673 6151 0 4799 115 5 8 chr20 16111320 16112058 -56041824 + L1PA13 LINE L1 5428 6163 0 335 296 140 22 chr20 16112478 16112657 -56041225 + MIR SINE MIR 20 219 -43 2028 121 45 0 chr20 16113919 16114209 -56039673 - AluSx SINE Alu -7 305 3 1660 201 169 5 chr20 16114242 16114679 -56039203 - LTR22 LTR ERVK 0 509 1 197 257 229 19 chr20 16115332 16115437 -56038445 + MIR SINE MIR 94 220 -42 454 262 32 0 chr20 16117047 16117196 -56036686 + L1ME3A LINE L1 6006 6163 -2 1186 246 133 27 chr20 16118193 16118637 -56035245 + LTR16C LTR ERVL 1 491 0 1367 207 123 22 chr20 16118732 16119089 -56034793 + MSTD LTR MaLR 1 393 -3 21 36 0 0 chr20 16119899 16119927 -56033955 + AT_rich Low_complexity Low_complexity 1 28 0 347 233 56 11 chr20 16121365 16121455 -56032427 + MIR SINE MIR 123 216 -46 513 290 82 49 chr20 16121536 16121926 -56031956 + L1ME3A LINE L1 5653 6055 -115 391 263 0 0 chr20 16122538 16122618 -56031264 - L2 LINE L2 0 3272 3193 2604 113 78 11 chr20 16123476 16123816 -56030066 - L1PB1 LINE L1 -2 6149 5770 324 0 0 0 chr20 16123816 16123852 -56030030 + (TA)n Simple_repeat Simple_repeat 1 36 0 2604 113 78 11 chr20 16123852 16123961 -56029921 - L1PB1 LINE L1 -381 5770 5670 282 333 9 9 chr20 16124519 16124627 -56029255 + MER5C DNA MER1_type 16 123 -201 4319 146 62 10 chr20 16125400 16126211 -56027671 + L1MA4A LINE L1 5440 6292 -11 24 0 0 0 chr20 16126216 16126240 -56027642 + AT_rich Low_complexity Low_complexity 1 24 0 203 32 65 0 chr20 16126474 16126505 -56027377 + (CATATA)n Simple_repeat Simple_repeat 2 34 0 3444 176 54 112 chr20 16126507 16126686 -56027196 + MER21A LTR ERV1 26 214 -717 1686 15 0 20 chr20 16126686 16126887 -56026995 + AluY SINE Alu 108 304 -7 3444 176 54 112 chr20 16126887 16127651 -56026231 + MER21A LTR ERV1 214 914 -17 222 275 170 35 chr20 16127760 16127931 -56025951 + MER5C DNA MER1_type 128 321 -3 21 0 0 0 chr20 16128330 16128351 -56025531 + AT_rich Low_complexity Low_complexity 1 21 0 2308 126 0 18 chr20 16128351 16128732 -56025150 - L1PB1 LINE L1 -1 6150 5777 210 191 0 0 chr20 16128742 16128784 -56025098 + (CATATA)n Simple_repeat Simple_repeat 1 42 0 3575 162 13 6 chr20 16128791 16129977 -56023905 - L1PB1 LINE L1 -369 5782 4586 * 5992 202 9 30 chr20 16129973 16130133 -56023749 + L1M4c LINE L1 2323 2485 -3897 6258 28 3 1 chr20 16130133 16130902 -56022980 + L1PA3 LINE L1 5409 6155 0 5992 202 9 30 chr20 16130902 16132186 -56021696 + L1M4c LINE L1 2485 3735 -2647 29 28 0 0 chr20 16133016 16133052 -56020830 + AT_rich Low_complexity Low_complexity 1 36 0 465 236 45 19 chr20 16134559 16134716 -56019166 - LTR45 LTR ERV1 0 525 365 1758 121 23 4 chr20 16135112 16135369 -56018513 + AluSg SINE Alu 32 293 -17 1539 235 66 33 chr20 16136323 16136808 -56017074 + MER90 LTR ERV1 1 501 -113 322 283 81 0 chr20 16137236 16137335 -56016547 + L1ME1 LINE L1 1468 1574 -4968 2590 226 64 19 chr20 16137335 16138271 -56015611 + L1ME1 LINE L1 5684 6658 -6 320 93 0 0 chr20 16138308 16138351 -56015531 + Alu SINE Alu 249 291 -11 6910 177 10 10 chr20 16138730 16141202 -56012680 - L1PB1 LINE L1 0 6151 3681 657 274 20 0 chr20 16141495 16141692 -56012190 - MER58A DNA MER1_type -17 207 7 197 62 0 31 chr20 16141965 16141975 -56011907 + (CA)n Simple_repeat Simple_repeat 2 11 -21 1669 118 9 115 chr20 16141975 16142305 -56011577 + AluSp SINE Alu 1 295 -18 197 62 0 31 chr20 16142305 16142326 -56011556 + (CA)n Simple_repeat Simple_repeat 11 32 0 274 333 8 8 chr20 16142583 16142706 -56011176 + MER5C DNA MER1_type 1 123 -201 4153 154 63 6 chr20 16143490 16144302 -56009580 + L1MA4A LINE L1 5440 6297 -6 204 86 86 0 chr20 16144557 16144627 -56009255 + (TA)n Simple_repeat Simple_repeat 1 76 0 3090 170 62 130 chr20 16144627 16145193 -56008689 + MER21A LTR ERV1 9 484 -447 2186 87 0 14 chr20 16145193 16145537 -56008345 - AluY SINE Alu 0 340 1 3090 170 62 130 chr20 16145537 16145941 -56007941 + MER21A LTR ERV1 484 914 -17 230 220 119 51 chr20 16146085 16146203 -56007679 + MER5C DNA MER1_type 199 324 0 28 0 0 0 chr20 16147419 16147447 -56006435 + AT_rich Low_complexity Low_complexity 1 28 0 356 215 61 61 chr20 16148972 16149135 -56004747 - LTR45B LTR ERV1 -15 474 312 1379 104 0 0 chr20 16149351 16149534 -56004348 - AluY SINE Alu 0 311 129 2370 253 66 21 chr20 16150578 16151557 -56002325 + L1MB8 LINE L1 3786 4808 -1338 2341 239 52 18 chr20 16151626 16152351 -56001531 + L1MB8 LINE L1 5425 6174 -4 304 218 11 45 chr20 16152505 16152684 -56001198 + (TATAA)n Simple_repeat Simple_repeat 3 175 0 21 36 0 0 chr20 16153870 16153898 -55999984 + AT_rich Low_complexity Low_complexity 1 28 0 1761 236 32 9 chr20 16154405 16154842 -55999040 + MER90 LTR ERV1 3 449 -165 1352 254 8 17 chr20 16154851 16155210 -55998672 + MLT1A1 LTR MaLR 10 365 0 578 200 69 7 chr20 16155213 16155358 -55998524 + MER90 LTR ERV1 448 601 -13 * 1024 158 47 0 chr20 16155355 16155545 -55998337 + MER66B LTR ERV1 286 484 -2 491 279 96 25 chr20 16155628 16155868 -55998014 - MIR SINE MIR 0 262 6 182 266 53 44 chr20 16156879 16156992 -55996890 - MIR SINE MIR -65 143 30 3967 94 28 0 chr20 16157019 16157583 -55996299 - LTR19B LTR ERV1 0 580 1 521 306 53 36 chr20 16157820 16158121 -55995761 + MLT1L LTR MaLR 88 393 -222 280 270 56 11 chr20 16159161 16159250 -55994632 - MIR SINE MIR -50 212 120 502 316 93 9 chr20 16159991 16160206 -55993676 - MIR SINE MIR -10 252 20 2136 177 39 0 chr20 16160407 16160814 -55993068 - MSTA LTR MaLR 0 428 6 3562 147 10 2 chr20 16160819 16161404 -55992478 - MSTA-int LTR MaLR 0 1651 1062 3215 154 11 0 chr20 16161426 16161991 -55991891 - MSTA-int LTR MaLR -1080 571 1 2316 171 24 0 chr20 16161991 16162401 -55991481 - MSTA LTR MaLR 0 428 9 1039 217 61 50 chr20 16164275 16164653 -55989229 - MER66A LTR ERV1 -52 426 45 702 171 44 13 chr20 16165197 16165355 -55988527 + L1ME3A LINE L1 6008 6170 0 374 0 0 21 chr20 16165399 16165446 -55988436 + (CA)n Simple_repeat Simple_repeat 2 47 0 576 285 75 73 chr20 16166143 16166582 -55987300 - MER21B LTR ERV1 -326 537 98 331 265 23 53 chr20 16166559 16166691 -55987191 - MER77 LTR ERV1 -412 193 66 * 824 265 102 41 chr20 16167120 16167512 -55986370 + LTR16C LTR ERVL 66 481 -10 333 0 0 0 chr20 16167692 16167729 -55986153 + (TG)n Simple_repeat Simple_repeat 2 38 0 2063 105 0 14 chr20 16168105 16168416 -55985466 + AluSx SINE Alu 1 307 0 418 209 15 124 chr20 16170149 16170337 -55983545 - LTR48 LTR ERV1 0 731 521 967 153 37 161 chr20 16170400 16170778 -55983104 - LTR49 LTR ERV1 -263 332 2 323 255 33 30 chr20 16170917 16171052 -55982830 + L1ME LINE L1 5476 5612 -509 1140 106 0 0 chr20 16171054 16171205 -55982677 + AluSp/q SINE Alu 162 312 -1 337 207 37 0 chr20 16171239 16171321 -55982561 + MIR SINE MIR 124 208 -54 22 0 0 0 chr20 16171484 16171506 -55982376 + AT_rich Low_complexity Low_complexity 1 22 0 216 0 0 0 chr20 16172250 16172274 -55981608 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 23 33 0 0 chr20 16172695 16172725 -55981157 + AT_rich Low_complexity Low_complexity 1 30 0 1666 207 22 56 chr20 16173216 16173660 -55980222 - LTR65 LTR ERV1 -2 667 239 1249 189 23 12 chr20 16173661 16173920 -55979962 + MLT1E2 LTR MaLR 308 569 -57 1189 161 28 4 chr20 16173958 16174206 -55979676 - LTR65 LTR ERV1 -415 254 1 568 275 28 34 chr20 16174233 16174411 -55979471 - MIR SINE MIR -63 199 23 544 303 80 11 chr20 16174673 16174861 -55979021 - MIR SINE MIR -57 205 5 182 263 0 70 chr20 16175420 16175477 -55978405 + L2 LINE L2 3215 3267 -5 435 343 101 32 chr20 16176016 16176523 -55977359 - LTR67 LTR ERVL -14 543 2 406 241 14 164 chr20 16176716 16176776 -55977106 - MIR SINE MIR -13 249 182 1962 117 3 17 chr20 16176776 16177102 -55976780 - AluSg SINE Alu 0 310 1 406 241 14 164 chr20 16177102 16177327 -55976555 - MIR SINE MIR -80 182 7 946 148 0 51 chr20 16177829 16178045 -55975837 - Tigger3(Golem) DNA MER2_type -1 3028 2824 269 273 10 20 chr20 16278293 16278376 -55875506 + Charlie7 DNA MER1_type 1 84 -2528 2507 87 0 0 chr20 16278376 16278687 -55875195 - AluSx SINE Alu -1 311 1 269 273 10 20 chr20 16278687 16278702 -55875180 + Charlie7 DNA MER1_type 84 98 -2514 * 288 153 20 51 chr20 16278691 16278788 -55875094 + Charlie7 DNA MER1_type 2434 2527 -85 787 297 84 23 chr20 16278788 16279182 -55874700 - MER90 LTR ERV1 0 614 197 192 376 12 0 chr20 16279835 16279920 -55873962 - L2 LINE L2 -8 3264 3179 186 189 0 0 chr20 16279926 16279963 -55873919 + (TG)n Simple_repeat Simple_repeat 2 38 0 377 302 135 60 chr20 16280012 16280774 -55873108 + L2 LINE L2 1854 2672 -642 180 111 0 0 chr20 16281859 16281886 -55871996 + (T)n Simple_repeat Simple_repeat 1 27 0 336 265 20 93 chr20 16284269 16284325 -55869557 + MIR SINE MIR 48 107 -155 2006 116 34 31 chr20 16284325 16284617 -55869265 - AluSq SINE Alu -20 293 1 336 265 20 93 chr20 16284617 16284711 -55869171 + MIR SINE MIR 107 187 -75 381 303 38 23 chr20 16284832 16284964 -55868918 - L3 LINE CR1 -529 1048 915 566 307 35 10 chr20 16285110 16285312 -55868570 - MIR SINE MIR 0 262 56 181 400 11 0 chr20 16285539 16285629 -55868253 - L3 LINE CR1 -863 714 624 243 103 0 0 chr20 16285680 16285719 -55868163 + (TG)n Simple_repeat Simple_repeat 2 40 0 2242 94 0 0 chr20 16285941 16286228 -55867654 - AluY SINE Alu -24 287 1 2032 111 10 27 chr20 16286576 16286874 -55867008 - AluSx SINE Alu -19 293 1 351 301 55 41 chr20 16287065 16287211 -55866671 + MIR SINE MIR 3 150 -58 231 242 101 50 chr20 16287353 16287452 -55866430 - MIR SINE MIR -63 145 42 339 314 74 17 chr20 16289196 16289371 -55864511 + MLT1K LTR MaLR 347 531 -57 586 263 107 33 chr20 16289444 16289687 -55864195 - MIR SINE MIR 0 262 2 256 341 44 0 chr20 16290877 16290968 -55862914 - L2 LINE L2 -290 3023 2929 237 333 86 8 chr20 16292771 16292888 -55860994 + MIR SINE MIR 119 244 -18 561 209 22 37 chr20 16292913 16293047 -55860835 + MER5B DNA MER1_type 1 132 -46 181 250 0 0 chr20 16294769 16294809 -55859073 - L2 LINE L2 -12 3301 3262 * 208 222 0 27 chr20 16294792 16294862 -55859020 - MIR SINE MIR -63 145 104 4082 70 4 0 chr20 16295331 16295833 -55858049 - L1PA14 LINE L1 -1 6160 5657 4266 166 8 5 chr20 16295858 16296625 -55857257 - L1P LINE L1 -1231 4915 4147 2417 66 0 3 chr20 16296698 16296987 -55856895 + AluY SINE Alu 1 288 -23 183 330 134 0 chr20 16297028 16297125 -55856757 - MER5B DNA MER1_type -68 110 1 381 215 31 11 chr20 16297230 16297356 -55856526 + MIR SINE MIR 38 167 -62 387 233 180 79 chr20 16298216 16298405 -55855477 + MIR SINE MIR 34 241 -21 1632 193 89 29 chr20 16298783 16299216 -55854666 + MLT1E3 LTR MaLR 200 624 0 1153 240 138 48 chr20 16302040 16302452 -55851430 + MLT1J2 LTR MaLR 1 449 -1 428 300 45 40 chr20 16303552 16303752 -55850130 - L2 LINE L2 -87 3226 3026 25 0 0 0 chr20 16304277 16304302 -55849580 + AT_rich Low_complexity Low_complexity 1 25 0 369 137 55 7 chr20 16305022 16305168 -55848714 + (TA)n Simple_repeat Simple_repeat 2 154 0 1646 180 0 10 chr20 16305169 16305458 -55848424 - AluSx SINE Alu -26 286 1 22 0 0 0 chr20 16306587 16306609 -55847273 + AT_rich Low_complexity Low_complexity 1 22 0 220 220 20 0 chr20 16306958 16307008 -55846874 + CT-rich Low_complexity Low_complexity 2 52 0 505 162 324 14 chr20 16307111 16307253 -55846629 - MER5A DNA MER1_type -3 186 1 211 155 0 103 chr20 16307573 16307631 -55846251 - L2 LINE L2 -1 3312 3261 2376 155 42 35 chr20 16307658 16308084 -55845798 + LTR32 LTR ERVL 14 442 -29 1773 115 0 0 chr20 16308087 16308321 -55845561 - AluSx SINE Alu -78 234 1 352 133 239 26 chr20 16308415 16308528 -55845354 + MER5A DNA MER1_type 1 137 -52 1201 283 102 32 chr20 16309119 16309297 -55844585 - L2 LINE L2 -4 3309 3145 2219 118 3 0 chr20 16309297 16309601 -55844281 + AluSx SINE Alu 1 305 -7 1201 283 102 32 chr20 16309601 16310229 -55843653 - L2 LINE L2 -168 3145 2443 383 284 219 0 chr20 16310280 16310435 -55843447 - MIR SINE MIR -14 248 60 203 276 40 40 chr20 16310911 16310987 -55842895 - L2 LINE L2 -41 3272 3197 1808 143 0 73 chr20 16312474 16312606 -55841276 + AluSx SINE Alu 4 144 -168 2171 108 34 0 chr20 16312606 16312901 -55840981 + AluSq SINE Alu 1 305 -8 1808 143 0 73 chr20 16312901 16313097 -55840785 + AluSx SINE Alu 144 308 -4 543 257 107 43 chr20 16313158 16313474 -55840408 + MLT1I LTR MaLR 74 409 0 296 306 0 0 chr20 16313474 16313546 -55840336 - L3 LINE CR1 -30 1547 1476 430 330 37 37 chr20 16313586 16313777 -55840105 - MIR SINE MIR 0 262 72 194 211 118 13 chr20 16313912 16313988 -55839894 - MIR3 SINE MIR 0 208 125 205 335 161 21 chr20 16315468 16315704 -55838178 - L2 LINE L2 -15 3298 3030 1960 236 103 6 chr20 16315825 16316309 -55837573 + MLT1H LTR MaLR 11 541 -8 266 299 9 27 chr20 16317188 16317353 -55836529 + CT-rich Low_complexity Low_complexity 1 162 0 467 168 11 0 chr20 16317384 16317479 -55836403 + CT-rich Low_complexity Low_complexity 1 96 0 955 250 29 12 chr20 16318172 16318412 -55835470 + MIR SINE MIR 3 246 -16 2266 99 0 0 chr20 16318430 16318724 -55835158 - AluSx SINE Alu -18 294 1 641 312 65 5 chr20 16319082 16319281 -55834601 - MIR SINE MIR -38 224 14 218 136 23 0 chr20 16321510 16321554 -55832328 + (TCTA)n Simple_repeat Simple_repeat 2 46 0 222 281 18 0 chr20 16322104 16322161 -55831721 + GA-rich Low_complexity Low_complexity 3 60 0 860 223 17 0 chr20 16324866 16325041 -55828841 - MER5A DNA MER1_type -11 178 1 26 50 0 0 chr20 16325518 16325558 -55828324 + AT_rich Low_complexity Low_complexity 1 40 0 372 331 24 18 chr20 16325840 16326009 -55827873 + MIR SINE MIR 67 236 -26 269 156 0 36 chr20 16327558 16327614 -55826268 - MIR3 SINE MIR -54 154 100 288 260 31 10 chr20 16327715 16327811 -55826071 + MIR SINE MIR 47 144 -64 245 235 82 47 chr20 16328108 16328193 -55825689 - MIR SINE MIR -171 91 4 2029 152 0 0 chr20 16328569 16328872 -55825010 - AluSx SINE Alu -9 303 1 264 205 64 64 chr20 16328946 16329024 -55824858 - MIR3 SINE MIR -40 168 91 669 260 146 45 chr20 16329184 16329715 -55824167 + MLT1H1 LTR MaLR 1 550 -5 891 204 87 29 chr20 16330240 16330446 -55823436 - MER20 DNA MER1_type 0 219 2 250 215 77 15 chr20 16331035 16331100 -55822782 - LTR16A1 LTR ERVL -184 273 205 910 272 39 12 chr20 16332203 16332457 -55821425 - MIR SINE MIR 0 262 2 1540 126 39 4 chr20 16332971 16333201 -55820681 + AluSg/x SINE Alu 66 303 -9 289 296 43 37 chr20 16334273 16334435 -55819447 + L2 LINE L2 1935 2097 -1217 370 328 8 31 chr20 16334497 16334625 -55819257 - MER5A DNA MER1_type 0 189 65 747 263 30 38 chr20 16334775 16335019 -55818863 + MLT1H LTR MaLR 39 279 -270 2299 111 36 25 chr20 16337187 16337547 -55816335 - THE1B LTR MaLR 0 364 1 647 250 114 26 chr20 16339265 16339493 -55814389 + MIR SINE MIR 15 262 0 219 69 0 0 chr20 16339921 16339950 -55813932 + (CAG)n Simple_repeat Simple_repeat 1 29 0 310 277 185 15 chr20 16339950 16340070 -55813812 + MER5A DNA MER1_type 44 189 0 1015 230 28 57 chr20 16340574 16340892 -55812990 + LTR16C LTR ERVL 183 491 0 445 298 111 25 chr20 16340899 16341097 -55812785 + MIR SINE MIR 40 254 -8 635 242 0 0 chr20 16341204 16341324 -55812558 - FLAM_A SINE Alu -13 120 1 1635 216 60 50 chr20 16342287 16342783 -55811099 - MLT1D LTR MaLR -2 503 3 551 319 92 0 chr20 16342906 16343091 -55810791 + MIR SINE MIR 59 260 -2 339 184 43 57 chr20 16343278 16343419 -55810463 - L1MC4 LINE L1 -1 8041 7903 304 271 56 0 chr20 16343451 16343558 -55810324 - L1MC4 LINE L1 -124 7918 7806 482 189 123 8 chr20 16343593 16343715 -55810167 - MER58C DNA MER1_type 0 215 80 568 291 82 28 chr20 16343809 16344163 -55809719 - L1MC4 LINE L1 -288 7754 7382 188 33 0 33 chr20 16344185 16344215 -55809667 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 383 304 121 34 chr20 16344723 16344930 -55808952 - MIR SINE MIR -17 245 21 2777 182 48 40 chr20 16345000 16345691 -55808191 - L1ME2 LINE L1 -19 6145 5450 189 389 57 64 chr20 16345746 16345903 -55807979 + L2 LINE L2 3101 3256 -16 230 261 15 31 chr20 16346086 16346151 -55807731 - MER5B DNA MER1_type -20 158 95 245 330 20 10 chr20 16346295 16346395 -55807487 - MER5B DNA MER1_type -77 101 1 216 253 11 46 chr20 16347236 16347323 -55806559 + GA-rich Low_complexity Low_complexity 2 85 0 195 204 0 0 chr20 16347335 16347379 -55806503 + (TG)n Simple_repeat Simple_repeat 1 44 0 498 279 25 13 chr20 16347433 16347591 -55806291 - MIR3 SINE MIR -6 202 43 394 253 5 99 chr20 16349159 16349380 -55804502 - L1MC4 LINE L1 -213 7829 7630 293 384 81 34 chr20 16349584 16349907 -55803975 + L2 LINE L2 2935 3272 0 2348 103 0 0 chr20 16350173 16350475 -55803407 - AluSc SINE Alu -3 306 5 1619 239 74 9 chr20 16350761 16351208 -55802674 + L1ME3A LINE L1 5660 6135 -35 375 296 98 0 chr20 16351377 16351509 -55802373 - MIR SINE MIR -13 249 105 565 222 136 0 chr20 16351686 16351862 -55802020 + Charlie5 DNA MER1_type 1 200 -2412 * 929 201 18 25 chr20 16351860 16351962 -55801920 + Charlie5 DNA MER1_type 2352 2453 -171 2123 131 3 3 chr20 16351962 16352268 -55801614 - AluSx SINE Alu -6 306 1 929 201 18 25 chr20 16352268 16352439 -55801443 + Charlie5 DNA MER1_type 2453 2623 -1 2045 114 3 39 chr20 16352842 16353149 -55800733 + AluSx SINE Alu 1 296 -16 2289 77 37 0 chr20 16353149 16353447 -55800435 + AluY SINE Alu 1 309 -2 214 308 26 26 chr20 16353678 16353756 -55800126 + MIR SINE MIR 20 97 -111 213 222 185 0 chr20 16354118 16354172 -55799710 + L2 LINE L2 3182 3245 -27 1629 171 29 41 chr20 16354676 16354992 -55798890 + AluJo SINE Alu 1 312 0 247 247 95 79 chr20 16356924 16357114 -55796768 - MIR SINE MIR -4 258 66 536 191 55 109 chr20 16357120 16357340 -55796542 - MIR SINE MIR -24 238 31 304 375 59 0 chr20 16358132 16358268 -55795614 + MIR3 SINE MIR 65 208 0 1112 194 49 0 chr20 16359095 16359342 -55794540 - MER58B DNA MER1_type -4 337 79 252 249 85 67 chr20 16359437 16359602 -55794280 + MIR3 SINE MIR 34 201 -7 21 0 0 0 chr20 16360225 16360246 -55793636 + AT_rich Low_complexity Low_complexity 1 21 0 844 225 70 12 chr20 16360464 16360708 -55793174 + LTR56 LTR ERV1 188 445 0 270 295 128 45 chr20 16360806 16361165 -55792717 - L1ME LINE L1 -298 5823 5435 2155 109 0 14 chr20 16361250 16361544 -55792338 - AluSc SINE Alu -19 290 1 325 288 69 25 chr20 16361580 16361740 -55792142 - L1ME LINE L1 -820 5326 5160 189 147 0 0 chr20 16362220 16362254 -55791628 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 198 0 0 0 chr20 16362267 16362289 -55791593 + (TGG)n Simple_repeat Simple_repeat 1 22 0 271 269 7 28 chr20 16362541 16362686 -55791196 - L1ME LINE L1 -1549 4597 4456 249 308 62 14 chr20 16363194 16363402 -55790480 - L1ME LINE L1 -2036 4110 3893 70 81 0 0 chr20 16363525 16363686 -55790196 + AT_rich Low_complexity Low_complexity 1 161 0 827 203 11 28 chr20 16363810 16363987 -55789895 + AluJo SINE Alu 121 294 -18 28 61 0 0 chr20 16364461 16364510 -55789372 + AT_rich Low_complexity Low_complexity 1 49 0 374 313 45 45 chr20 16366878 16367057 -55786825 - L2 LINE L2 -92 3221 3043 1874 194 34 17 chr20 16368376 16368846 -55785036 + L1MA4 LINE L1 5815 6292 -8 3067 126 16 16 chr20 16370147 16370656 -55783226 - MER75 DNA T2_type 0 514 6 231 219 252 8 chr20 16370913 16371032 -55782850 + L2 LINE L2 2701 2848 -466 2215 119 0 45 chr20 16372070 16372423 -55781459 + MER1B DNA MER1_type 1 337 0 543 31 0 0 chr20 16374665 16374730 -55779152 + (TA)n Simple_repeat Simple_repeat 1 65 0 254 182 0 61 chr20 16374976 16375042 -55778840 + GA-rich Low_complexity Low_complexity 3 64 0 1931 143 3 0 chr20 16375276 16375605 -55778277 + L1MA9 LINE L1 4721 5050 -1096 * 1998 137 16 18 chr20 16375594 16375981 -55777901 + L1MA9 LINE L1 5894 6279 -33 219 254 0 61 chr20 16376000 16376114 -55777768 + A-rich Low_complexity Low_complexity 2 108 0 420 162 0 0 chr20 16376157 16376231 -55777651 + MER116 DNA Mariner 2 75 -5 552 305 94 37 chr20 16376669 16377075 -55776807 + L1MB8 LINE L1 4231 4659 -1487 1768 128 60 24 chr20 16377172 16377524 -55776358 + AluSx SINE Alu 1 363 0 1239 127 11 0 chr20 16377570 16377751 -55776131 + AluSg/x SINE Alu 129 311 -1 1876 131 0 33 chr20 16377819 16378155 -55775727 + AluSx SINE Alu 4 312 0 338 297 68 56 chr20 16378505 16378842 -55775040 + L1MB8 LINE L1 5313 5653 -468 313 269 71 43 chr20 16378920 16379061 -55774821 + L1MB8 LINE L1 5776 5920 -258 235 294 14 48 chr20 16379330 16379476 -55774406 - MARNA DNA Mariner -63 523 383 1516 278 91 22 chr20 16379625 16380261 -55773621 - L2 LINE L2 -310 3003 2325 411 239 161 0 chr20 16380270 16380425 -55773457 - L2 LINE L2 -1745 1569 1390 2242 137 133 74 chr20 16380425 16380618 -55773264 + LTR64 LTR ERVK 1 181 -377 3983 147 30 1 chr20 16380618 16380933 -55772949 + L1PB4 LINE L1 5459 5764 -392 195 42 0 0 chr20 16380933 16380957 -55772925 + (CA)n Simple_repeat Simple_repeat 1 24 0 3983 147 30 1 chr20 16380957 16381320 -55772562 + L1PB4 LINE L1 5764 6156 0 2242 137 133 74 chr20 16381320 16381354 -55772528 + LTR64 LTR ERVK 181 212 -346 360 0 0 0 chr20 16381354 16381394 -55772488 + (TAAA)n Simple_repeat Simple_repeat 4 43 0 2242 137 133 74 chr20 16381394 16381692 -55772190 + LTR64 LTR ERVK 212 558 0 637 292 20 0 chr20 16381692 16381894 -55771988 - L2 LINE L2 -1921 1393 1188 229 267 74 91 chr20 16381918 16382094 -55771788 - L2 LINE L2 -2282 1032 860 188 138 0 0 chr20 16382106 16382135 -55771747 + MER5B DNA MER1_type 150 178 0 309 235 15 0 chr20 16382347 16382415 -55771467 - MER5A DNA MER1_type 0 189 121 1009 223 50 18 chr20 16382629 16382912 -55770970 + MER87 LTR ERV1 211 502 -39 509 192 8 0 chr20 16383508 16383633 -55770249 + (TCCA)n Simple_repeat Simple_repeat 1 126 0 761 306 85 35 chr20 16383642 16384067 -55769815 - L2 LINE L2 -40 3273 2828 1017 157 7 0 chr20 16384622 16384775 -55769107 - FRAM SINE Alu -23 153 1 905 107 36 0 chr20 16385138 16385445 -55768437 + GA-rich Low_complexity Low_complexity 5 319 0 535 303 73 51 chr20 16387291 16387703 -55766179 + MLT1J LTR MaLR 1 421 -90 424 38 0 0 chr20 16387812 16387865 -55766017 - MADE1 DNA Mariner -27 53 1 650 281 25 10 chr20 16387889 16388092 -55765790 + L1MC4 LINE L1 6797 7002 -1040 226 344 10 0 chr20 16391903 16391999 -55761883 + MIR SINE MIR 17 113 -95 2291 98 0 35 chr20 16392093 16392411 -55761471 - AluSq SINE Alu -6 307 1 281 301 58 0 chr20 16392474 16392577 -55761305 + MLT1H LTR MaLR 197 305 -244 347 281 10 0 chr20 16392684 16392780 -55761102 + MLT1H LTR MaLR 453 549 0 251 227 91 15 chr20 16393555 16393621 -55760261 - L2 LINE L2 -4 3268 3198 1103 212 71 67 chr20 16393637 16394103 -55759779 + LTR37B LTR ERV1 1 468 0 2556 69 7 0 chr20 16394238 16394542 -55759340 - AluSx SINE Alu -6 306 1 584 240 36 53 chr20 16395017 16395242 -55758640 - LTR33 LTR ERVL 0 521 301 652 255 14 0 chr20 16395268 16395413 -55758469 - LTR33 LTR ERVL -361 160 14 243 265 112 0 chr20 16395463 16395561 -55758321 - MIR SINE MIR -43 219 111 1682 119 0 9 chr20 16396083 16396310 -55757572 - AluSq SINE Alu -88 225 1 190 180 100 20 chr20 16396414 16396464 -55757418 + MIR SINE MIR 91 144 -118 236 167 0 36 chr20 16396719 16396774 -55757108 - MIR SINE MIR -99 163 113 2334 118 0 0 chr20 16397124 16397429 -55756453 - AluSx SINE Alu -7 305 1 280 274 27 0 chr20 16397749 16397822 -55756060 + MER91A DNA MER1_type 8 82 -114 237 329 77 19 chr20 16397921 16398076 -55755806 + L2 LINE L2 2945 3108 -164 719 299 34 24 chr20 16398299 16398627 -55755255 + L2 LINE L2 2982 3312 -1 214 269 0 23 chr20 16399185 16399285 -55754597 + (TA)n Simple_repeat Simple_repeat 1 98 -73 1954 107 13 63 chr20 16399285 16399607 -55754275 - AluSx SINE Alu 0 307 1 214 269 0 23 chr20 16399607 16399680 -55754202 + (TA)n Simple_repeat Simple_repeat 98 171 0 696 236 34 0 chr20 16399814 16399992 -55753890 + MER5A DNA MER1_type 6 189 0 2247 101 0 17 chr20 16400776 16401074 -55752808 - AluSx SINE Alu -19 293 1 373 311 74 16 chr20 16402765 16402887 -55750995 - L2 LINE L2 0 3272 3144 429 223 16 33 chr20 16402900 16403021 -55750861 + MER5B DNA MER1_type 54 172 -6 558 29 0 0 chr20 16403704 16403772 -55750110 + (CAAAA)n Simple_repeat Simple_repeat 3 70 0 378 0 0 0 chr20 16405983 16406025 -55747857 + (CA)n Simple_repeat Simple_repeat 2 43 0 2207 99 17 3 chr20 16406294 16406588 -55747294 - AluSq SINE Alu -14 299 2 231 292 112 11 chr20 16406844 16406933 -55746949 + MIR SINE MIR 47 144 -64 2255 99 3 20 chr20 16407255 16407557 -55746325 - AluSx SINE Alu -15 297 1 210 111 89 0 chr20 16407815 16407860 -55746022 + (AAATG)n Simple_repeat Simple_repeat 4 52 0 920 245 71 41 chr20 16407970 16408264 -55745618 + MLT1E LTR MaLR 1 303 -290 726 196 0 77 chr20 16408257 16408425 -55745457 + MLT1E LTR MaLR 439 593 0 * 272 88 0 0 chr20 16410183 16410217 -55743665 + MLT1I LTR MaLR 127 160 -249 359 136 51 0 chr20 16410229 16410288 -55743594 + MLT1J1 LTR MaLR 265 326 -120 340 274 21 0 chr20 16410289 16410384 -55743498 - MIR SINE MIR -78 130 34 827 230 94 5 chr20 16410440 16410653 -55743229 + MIR SINE MIR 10 241 -21 1665 317 143 25 chr20 16411225 16412564 -55741318 + L2 LINE L2 586 2082 -1232 188 222 0 0 chr20 16412590 16412635 -55741247 + L2 LINE L2 2304 2348 -966 517 326 180 16 chr20 16412670 16413400 -55740482 + L2 LINE L2 2448 3313 0 1978 218 89 4 chr20 16415828 16416333 -55737549 - L1ME3A LINE L1 -13 6157 5610 599 52 39 0 chr20 16416334 16416411 -55737471 + THE1A LTR MaLR 1 80 -275 5278 74 5 0 chr20 16416416 16417076 -55736806 + THE1A-int LTR MaLR 918 1580 0 904 112 8 0 chr20 16417076 16417201 -55736681 + THE1A LTR MaLR 1 126 -229 2229 110 0 3 chr20 16417323 16417615 -55736267 + AluSc SINE Alu 4 294 -15 279 311 95 20 chr20 16418042 16418190 -55735692 - MIR SINE MIR -79 183 25 233 180 10 56 chr20 16418191 16418266 -55735616 + MLT1I LTR MaLR 104 149 -260 233 274 0 0 chr20 16418565 16418627 -55735255 - MER5A DNA MER1_type 0 189 128 5590 128 21 9 chr20 16418630 16419569 -55734313 + L1PB4 LINE L1 5215 6152 -4 358 270 20 10 chr20 16419583 16419683 -55734199 - MER5A DNA MER1_type -80 109 9 2385 93 3 0 chr20 16419928 16420228 -55733654 - AluSp SINE Alu -11 302 2 1688 225 101 17 chr20 16420843 16421392 -55732490 + L1ME1 LINE L1 5582 6334 0 767 234 64 0 chr20 16422417 16422605 -55731277 - LTR16C LTR ERVL -3 488 289 237 65 0 0 chr20 16422767 16422798 -55731084 + (TTTTC)n Simple_repeat Simple_repeat 5 35 0 362 341 41 52 chr20 16423043 16423410 -55730472 + L3b LINE CR1 1114 1476 -107 1998 241 33 10 chr20 16423855 16424374 -55729508 + L1ME2 LINE L1 5634 6164 0 333 217 9 19 chr20 16424387 16424493 -55729389 + GA-rich Low_complexity Low_complexity 4 108 0 513 313 102 31 chr20 16424761 16425240 -55728642 + HAL1 LINE L1 1214 1726 -781 2318 99 0 26 chr20 16425270 16425583 -55728299 + AluSx SINE Alu 1 305 -7 2520 63 0 0 chr20 16425735 16426036 -55727846 + AluY SINE Alu 1 301 -10 2314 97 0 0 chr20 16426040 16426329 -55727553 + AluY SINE Alu 1 289 -22 330 279 50 19 chr20 16426348 16426509 -55727373 + L1M4 LINE L1 2247 2412 -3734 1433 240 88 49 chr20 16426592 16427104 -55726778 + MLT1H LTR MaLR 18 549 0 229 151 38 0 chr20 16428065 16428118 -55725764 + (TA)n Simple_repeat Simple_repeat 1 55 0 720 196 65 54 chr20 16428278 16428390 -55725492 + MIR SINE MIR 77 193 -69 2603 47 0 25 chr20 16428390 16428709 -55725173 + AluY SINE Alu 1 311 0 720 196 65 54 chr20 16428709 16428780 -55725102 + MIR SINE MIR 193 262 0 581 207 58 29 chr20 16430042 16430216 -55723666 + MIR SINE MIR 82 260 -2 2200 73 22 0 chr20 16430322 16430660 -55723222 - AluSx SINE Alu 0 346 3 204 67 0 0 chr20 16431716 16431746 -55722136 + (CAG)n Simple_repeat Simple_repeat 2 31 0 29 0 0 0 chr20 16431791 16431820 -55722062 + GC_rich Low_complexity Low_complexity 1 29 0 24 77 0 0 chr20 16431899 16431951 -55721931 + GC_rich Low_complexity Low_complexity 1 52 0 234 62 0 0 chr20 16431958 16431990 -55721892 + (CCG)n Simple_repeat Simple_repeat 3 34 0 591 40 0 0 chr20 16432256 16432330 -55721552 + (GGA)n Simple_repeat Simple_repeat 1 74 0 1993 134 6 34 chr20 16435254 16435575 -55718307 - AluSx SINE Alu 0 312 1 240 301 115 39 chr20 16435592 16435748 -55718134 + MLT1J2 LTR MaLR 267 434 -16 671 214 62 45 chr20 16436177 16436401 -55717481 - L1MC5 LINE L1 -33 7928 7701 872 231 183 53 chr20 16436515 16436909 -55716973 + MLT1J2 LTR MaLR 1 445 -5 818 244 52 5 chr20 16436931 16437144 -55716738 - MER58A DNA MER1_type -1 223 1 211 156 78 111 chr20 16437224 16437314 -55716568 + MIR SINE MIR 101 187 -75 263 224 282 0 chr20 16437388 16437473 -55716409 + L2 LINE L2 3204 3312 -1 485 253 73 27 chr20 16438258 16438408 -55715474 - MIR3 SINE MIR -29 179 23 589 214 213 0 chr20 16438426 16438660 -55715222 - L1ME3A LINE L1 -1 6163 5876 623 211 207 160 chr20 16438744 16438979 -55714903 + MLT1H LTR MaLR 1 223 -326 396 0 0 0 chr20 16438979 16439023 -55714859 + (TG)n Simple_repeat Simple_repeat 1 44 0 623 211 207 160 chr20 16439023 16439294 -55714588 + MLT1H LTR MaLR 223 531 -18 1296 242 31 50 chr20 16439313 16439789 -55714093 - L1MC4 LINE L1 -184 7858 7392 418 290 62 56 chr20 16441099 16441261 -55712621 - MLT1J2 LTR MaLR 0 450 288 394 238 186 35 chr20 16441287 16441459 -55712423 - MLT1J2 LTR MaLR -221 229 32 314 284 0 20 chr20 16441567 16441669 -55712213 - MER58 DNA MER1_type -3 2417 2318 405 203 0 0 chr20 16441682 16441756 -55712126 - MER58 DNA MER1_type -2322 98 25 29 47 0 0 chr20 16442746 16442789 -55711093 + AT_rich Low_complexity Low_complexity 1 43 0 288 0 0 0 chr20 16442894 16442926 -55710956 + (CA)n Simple_repeat Simple_repeat 2 33 0 306 212 71 20 chr20 16443040 16443139 -55710743 - L1ME3A LINE L1 -275 5846 5743 1714 236 49 25 chr20 16443193 16443680 -55710202 + L1ME3 LINE L1 5657 6155 -7 260 209 38 48 chr20 16444241 16444346 -55709536 - MLT1J2 LTR MaLR -22 428 325 1444 255 134 16 chr20 16444595 16445086 -55708796 - MLT1H LTR MaLR 0 549 1 1627 163 140 93 chr20 16445684 16446176 -55707706 + MLT2B2 LTR ERVL 1 515 0 410 247 174 64 chr20 16446176 16446395 -55707487 + MLT1H LTR MaLR 133 375 -174 233 111 28 0 chr20 16446401 16446437 -55707445 + MLT1H LTR MaLR 538 574 -16 648 283 95 43 chr20 16446676 16447022 -55706860 + MLT1J2 LTR MaLR 23 386 -64 23 33 0 0 chr20 16447022 16447052 -55706830 + AT_rich Low_complexity Low_complexity 1 30 0 306 190 38 13 chr20 16447052 16447131 -55706751 + MLT1J2 LTR MaLR 368 448 -2 558 278 112 14 chr20 16447482 16447759 -55706123 + LTR16C LTR ERVL 88 391 -100 1449 220 8 47 chr20 16447793 16448152 -55705730 + MLT1A1 LTR MaLR 21 365 0 373 302 133 19 chr20 16448159 16448472 -55705410 - L2 LINE L2 -261 3052 2697 1107 98 0 0 chr20 16448847 16448990 -55704892 + AluSg/x SINE Alu 145 287 -25 222 91 0 0 chr20 16448990 16449023 -55704859 + (TA)n Simple_repeat Simple_repeat 1 33 0 21 57 0 0 chr20 16449946 16449981 -55703901 + AT_rich Low_complexity Low_complexity 1 35 0 504 234 85 7 chr20 16450241 16450382 -55703500 + MIR SINE MIR 108 259 -3 196 295 0 49 chr20 16450383 16450444 -55703438 + L2 LINE L2 3205 3262 -10 2187 155 0 54 chr20 16450545 16450971 -55702911 + MER57A LTR ERV1 1 403 0 1516 221 62 26 chr20 16451004 16451424 -55702458 - MER63B DNA MER1_type -1 435 1 2301 84 0 3 chr20 16451491 16451788 -55702094 + AluSg SINE Alu 2 297 -13 481 319 50 21 chr20 16452117 16452396 -55701486 + L2 LINE L2 2456 2742 -572 227 354 59 29 chr20 16452492 16452701 -55701181 + MIR SINE MIR 31 261 -1 270 160 0 0 chr20 16452843 16452893 -55700989 + T-rich Low_complexity Low_complexity 2 51 0 198 260 55 41 chr20 16454023 16454096 -55699786 + L2 LINE L2 3170 3243 -70 237 145 48 0 chr20 16454132 16454194 -55699688 + GA-rich Low_complexity Low_complexity 1 65 0 1692 187 11 0 chr20 16454340 16454782 -55699100 + AluJo SINE Alu 1 445 0 473 86 14 0 chr20 16454922 16454992 -55698890 + L1MB1 LINE L1 6082 6152 -37 1571 194 19 16 chr20 16454992 16455307 -55698575 + MLT1A1 LTR MaLR 1 316 -49 737 213 72 0 chr20 16456758 16456965 -55696917 - Charlie5 DNA MER1_type -54 2558 2337 278 237 0 0 chr20 16456960 16457019 -55696863 - Charlie5 DNA MER1_type -2553 59 1 * 303 250 107 0 chr20 16457042 16457126 -55696756 - L2 LINE L2 -299 3014 2922 1164 292 58 7 chr20 16457815 16458247 -55695635 - LTR16C LTR ERVL 0 491 38 359 62 0 0 chr20 16458359 16458407 -55695475 - MADE1 DNA Mariner 0 80 33 257 345 69 52 chr20 16458620 16458736 -55695146 + MLT1K LTR MaLR 111 228 -360 438 20 0 0 chr20 16458948 16458999 -55694883 + (CA)n Simple_repeat Simple_repeat 2 52 0 230 325 13 0 chr20 16459554 16459631 -55694251 + LTR67 LTR ERVL 97 174 -383 * 777 288 26 76 chr20 16459571 16459994 -55693888 + MLT1J LTR MaLR 110 511 0 1338 206 69 33 chr20 16460221 16460643 -55693239 - L1MCc LINE L1 -3947 2994 2558 1034 176 33 107 chr20 16460689 16460961 -55692921 + AluJo SINE Alu 1 252 -60 209 108 0 27 chr20 16460967 16461004 -55692878 + (TG)n Simple_repeat Simple_repeat 1 36 0 1365 194 32 25 chr20 16461004 16461288 -55692594 - AluJo SINE Alu -26 286 1 741 195 63 20 chr20 16461291 16461500 -55692382 - L1MCc LINE L1 -4541 2400 2207 751 148 20 10 chr20 16461502 16461636 -55692246 - MSTD LTR MaLR -8 388 249 6830 157 16 20 chr20 16461655 16463250 -55690632 - L1MA5 LINE L1 -6 6294 4693 5402 129 11 5 chr20 16463250 16464353 -55689529 - L1PA16 LINE L1 -15 6151 5026 2801 128 14 0 chr20 16464353 16464781 -55689101 - MER57B LTR ERV1 0 434 1 6830 157 16 20 chr20 16464781 16465441 -55688441 - L1MA5 LINE L1 -1605 4695 4039 299 205 73 130 chr20 16465443 16465669 -55688213 - MLT1A2 LTR MaLR -120 276 1 3186 216 62 58 chr20 16465669 16465785 -55688097 - L1MCc LINE L1 -4847 2094 1980 2246 86 48 0 chr20 16465785 16466075 -55687807 - AluSc SINE Alu -5 304 1 3186 216 62 58 chr20 16466075 16467724 -55686158 - L1MCc LINE L1 -4961 1980 1 343 305 120 12 chr20 16468345 16468512 -55685370 - L1MC/D LINE L1 -793 5449 5265 282 125 39 173 chr20 16468625 16468729 -55685153 - MLT1F LTR MaLR -39 503 414 229 192 0 19 chr20 16468861 16468913 -55684969 - MLT1H LTR MaLR -392 157 107 496 261 9 17 chr20 16469326 16469441 -55684441 + L2 LINE L2 3197 3310 -3 2414 94 0 0 chr20 16469485 16469793 -55684089 - AluY SINE Alu -1 310 3 1256 269 102 44 chr20 16470105 16470607 -55683275 - MLT1H LTR MaLR 0 549 19 256 307 129 0 chr20 16470774 16470875 -55683007 - L2 LINE L2 -1 3312 3199 231 340 20 20 chr20 16471299 16471399 -55682483 - L2 LINE L2 -241 3031 2932 533 318 77 5 chr20 16471648 16471868 -55682014 - MIR SINE MIR -15 247 12 1018 285 82 5 chr20 16472098 16472474 -55681408 - LTR16C LTR ERVL -2 489 85 330 26 0 0 chr20 16474102 16474141 -55679741 + (CA)n Simple_repeat Simple_repeat 2 40 0 25 51 0 0 chr20 16474303 16474342 -55679540 + AT_rich Low_complexity Low_complexity 1 39 0 6161 137 40 17 chr20 16474474 16475468 -55678414 - L1MA5A LINE L1 -3 6294 5325 183 42 0 0 chr20 16475468 16475492 -55678390 + (TTG)n Simple_repeat Simple_repeat 1 24 0 6161 137 40 17 chr20 16475492 16476277 -55677605 - L1MA5A LINE L1 -972 5325 4478 2256 117 0 3 chr20 16476277 16476585 -55677297 - AluSx SINE Alu -5 307 1 6161 137 40 17 chr20 16476585 16476840 -55677042 - L1MA5A LINE L1 -1819 4478 4230 2850 152 86 2 chr20 16476842 16477387 -55676495 + L1MA5A LINE L1 3652 4242 -1904 1137 280 129 20 chr20 16477378 16478029 -55675853 - L1MEd LINE L1 -5035 1084 363 * 618 271 102 0 chr20 16478115 16478340 -55675542 - L1MEd LINE L1 -5870 249 2 2269 138 28 0 chr20 16478392 16478746 -55675136 - THE1B LTR MaLR 0 364 1 1891 158 3 7 chr20 16478829 16479127 -55674755 - AluJb SINE Alu -15 297 1 370 197 14 0 chr20 16480507 16480578 -55673304 + MLT1J2 LTR MaLR 252 323 -127 657 302 60 13 chr20 16480648 16480946 -55672936 - HAL1 LINE L1 -689 1818 1507 301 268 73 16 chr20 16481061 16481184 -55672698 + L1ME LINE L1 5436 5565 -556 305 301 65 55 chr20 16481403 16481821 -55672061 - HAL1 LINE L1 -1259 1248 827 711 193 67 40 chr20 16483627 16483850 -55670032 + L1MC5 LINE L1 7695 7923 -38 487 276 138 64 chr20 16483899 16484155 -55669727 + LTR16A LTR ERVL 95 382 -68 1034 196 77 0 chr20 16484155 16484349 -55669533 + MER63A DNA MER1_type 1 209 -1 487 276 138 64 chr20 16484349 16484418 -55669464 + LTR16A LTR ERVL 382 444 -6 27 29 0 0 chr20 16484437 16484471 -55669411 + AT_rich Low_complexity Low_complexity 1 34 0 273 128 0 0 chr20 16484551 16484598 -55669284 + (CA)n Simple_repeat Simple_repeat 1 47 0 2261 105 3 9 chr20 16485060 16485375 -55668507 + AluSp SINE Alu 1 313 0 440 271 36 29 chr20 16485668 16485808 -55668074 - MER5A DNA MER1_type -5 184 44 201 237 0 0 chr20 16486061 16486099 -55667783 + (TG)n Simple_repeat Simple_repeat 1 38 0 205 273 30 45 chr20 16487451 16487517 -55666365 + MER5A DNA MER1_type 41 105 -84 198 0 0 0 chr20 16488421 16488443 -55665439 + (TG)n Simple_repeat Simple_repeat 2 23 0 1762 28 0 14 chr20 16489425 16489642 -55664240 + L1PA4 LINE L1 5942 6155 0 204 327 14 13 chr20 16489651 16489752 -55664130 + MIR SINE MIR 54 157 -59 253 292 28 0 chr20 16489780 16489852 -55664030 + L3b LINE CR1 1389 1462 -121 25 0 0 0 chr20 16589922 16589947 -55563935 + AT_rich Low_complexity Low_complexity 1 25 0 1745 180 7 0 chr20 16589953 16590272 -55563610 + AluJb SINE Alu 1 321 0 1251 175 24 0 chr20 16590625 16590871 -55563011 - L1MB2 LINE L1 -7 6164 5913 280 77 39 19 chr20 16591261 16591313 -55562569 + CT-rich Low_complexity Low_complexity 3 55 0 379 255 78 161 chr20 16592250 16592611 -55561271 - L2 LINE L2 -13 3259 2929 444 264 244 0 chr20 16595014 16595211 -55558671 - MIR SINE MIR -12 250 6 417 218 71 101 chr20 16595739 16596090 -55557792 - MLT1H1 LTR MaLR -6 549 123 771 181 17 6 chr20 16596210 16596387 -55557495 + L1MA8 LINE L1 6109 6287 -4 1787 242 50 14 chr20 16596533 16597017 -55556865 - MLT1D LTR MaLR -2 503 3 1838 210 73 21 chr20 16597022 16597502 -55556380 - MLT1D LTR MaLR 0 505 1 2525 28 0 0 chr20 16597647 16597958 -55555924 + AluYa5 SINE Alu 1 311 0 543 327 71 4 chr20 16600338 16600564 -55553318 + MIR SINE MIR 7 247 -15 347 216 43 35 chr20 16600614 16600730 -55553152 - L1ME4a LINE L1 -65 6056 5940 373 296 81 31 chr20 16601138 16601642 -55552240 - L1MC4a LINE L1 -446 5675 5512 23 0 0 0 chr20 16601779 16601802 -55552080 + AT_rich Low_complexity Low_complexity 1 23 0 200 176 39 0 chr20 16601992 16602043 -55551839 + (TA)n Simple_repeat Simple_repeat 1 53 0 243 299 179 0 chr20 16602102 16602219 -55551663 - L2 LINE L2 0 3313 3176 6940 53 7 0 chr20 16602842 16603743 -55550139 + L1PA7 LINE L1 5233 6139 -15 633 350 62 0 chr20 16603867 16604093 -55549789 + MIR SINE MIR 1 240 -22 4448 187 18 31 chr20 16604239 16604826 -55549056 - L1MB5 LINE L1 -31 6143 5550 1586 183 11 14 chr20 16604826 16605142 -55548740 - AluJb SINE Alu 0 320 6 4448 187 18 31 chr20 16605142 16606041 -55547841 - L1MB5 LINE L1 -624 5550 4675 2371 92 0 10 chr20 16606182 16606496 -55547386 - AluY SINE Alu 0 311 1 22 0 0 0 chr20 16606504 16606526 -55547356 + AT_rich Low_complexity Low_complexity 1 22 0 499 283 14 35 chr20 16606683 16606895 -55546987 - MIR SINE MIR -41 221 16 26 30 0 0 chr20 16607225 16607258 -55546624 + AT_rich Low_complexity Low_complexity 1 33 0 2082 164 68 17 chr20 16608601 16609084 -55544798 - Charlie1b DNA MER1_type -6 517 10 393 86 0 0 chr20 16609675 16609733 -55544149 + (TG)n Simple_repeat Simple_repeat 1 58 0 545 299 110 50 chr20 16610095 16611140 -55542742 - L1MEd LINE L1 -4548 1581 465 335 333 53 67 chr20 16611193 16611418 -55542464 - L1MEd LINE L1 -5896 223 2 21 0 0 0 chr20 16612020 16612041 -55541841 + AT_rich Low_complexity Low_complexity 1 21 0 186 43 0 0 chr20 16613150 16613173 -55540709 + (TC)n Simple_repeat Simple_repeat 2 24 0 1872 149 0 14 chr20 16613174 16613456 -55540426 - AluJb SINE Alu -26 286 9 608 278 90 0 chr20 16613932 16614155 -55539727 + MIR SINE MIR 20 262 0 1062 261 159 6 chr20 16614818 16615163 -55538719 + LTR16C LTR ERVL 84 481 -10 2153 307 93 13 chr20 16615211 16616172 -55537710 + L2 LINE L2 2023 3075 -238 463 309 66 7 chr20 16616350 16616502 -55537380 - MIR SINE MIR -99 163 3 180 306 48 0 chr20 16618120 16618182 -55535700 - L2 LINE L2 -9 3263 3199 338 193 140 35 chr20 16618356 16618470 -55535412 + MLT1H LTR MaLR 29 154 -395 235 167 206 78 chr20 16618598 16618700 -55535182 + MLT1H LTR MaLR 434 548 -1 207 362 24 31 chr20 16618932 16619059 -55534823 - L2 LINE L2 -472 2842 2717 359 102 0 0 chr20 16619307 16619356 -55534526 - Alu SINE Alu -11 291 243 2149 112 6 3 chr20 16619428 16619740 -55534142 - AluSq SINE Alu 0 313 1 2114 121 0 0 chr20 16619864 16620170 -55533712 + AluSc SINE Alu 4 309 0 310 100 33 0 chr20 16621190 16621250 -55532632 + CT-rich Low_complexity Low_complexity 3 64 0 2357 86 3 0 chr20 16621470 16621761 -55532121 - AluSc SINE Alu -17 292 1 185 293 63 63 chr20 16621845 16622050 -55531832 - MER5C DNA MER1_type -94 230 26 2417 89 0 0 chr20 16622391 16622695 -55531187 - AluSg SINE Alu -1 309 6 195 100 0 0 chr20 16622717 16622747 -55531135 + (TG)n Simple_repeat Simple_repeat 2 31 0 25 31 0 0 chr20 16623671 16623703 -55530179 + AT_rich Low_complexity Low_complexity 1 32 0 2616 102 16 8 chr20 16625341 16625713 -55528169 + THE1C LTR MaLR 1 375 0 356 266 103 101 chr20 16625950 16626395 -55527487 - L2 LINE L2 -237 3035 2591 423 263 31 56 chr20 16627291 16627451 -55526431 + MIR SINE MIR 29 184 -78 204 278 0 0 chr20 16627555 16627609 -55526273 + (CA)n Simple_repeat Simple_repeat 1 54 0 23 0 0 0 chr20 16630703 16630726 -55523156 + AT_rich Low_complexity Low_complexity 1 23 0 218 175 0 0 chr20 16631293 16631333 -55522549 + (TG)n Simple_repeat Simple_repeat 1 40 0 2262 94 0 7 chr20 16631795 16632104 -55521778 + AluSg SINE Alu 1 307 -3 934 249 14 0 chr20 16632246 16632463 -55521419 + MER58A DNA MER1_type 1 220 -4 534 336 76 0 chr20 16632555 16632778 -55521104 - MIR SINE MIR -21 241 2 2170 122 0 0 chr20 16634384 16634679 -55519203 - AluSc SINE Alu -14 295 1 220 186 34 0 chr20 16634776 16634835 -55519047 + GA-rich Low_complexity Low_complexity 2 62 0 28 29 0 0 chr20 16635349 16635384 -55518498 + AT_rich Low_complexity Low_complexity 1 35 0 675 264 46 32 chr20 16635457 16635737 -55518145 + L1MA9 LINE L1 5992 6275 -37 391 218 188 15 chr20 16635755 16635888 -55517994 + MLT1A2 LTR MaLR 155 310 -64 895 207 152 13 chr20 16636130 16636367 -55517515 - LTR16C LTR ERVL 0 491 222 2181 113 0 3 chr20 16636685 16636978 -55516904 + AluSx SINE Alu 1 292 -20 21 36 0 0 chr20 16636979 16637007 -55516875 + AT_rich Low_complexity Low_complexity 1 28 0 432 241 124 51 chr20 16637007 16637144 -55516738 - FRAM SINE Alu -19 147 1 278 291 13 25 chr20 16637167 16637246 -55516636 - MIR3 SINE MIR -120 88 11 357 250 28 28 chr20 16637497 16637683 -55516199 + L1ME3A LINE L1 5683 5873 -297 2118 130 0 0 chr20 16637685 16637977 -55515905 + AluSq SINE Alu 1 292 -21 1074 144 0 0 chr20 16637979 16638159 -55515723 + (TA)n Simple_repeat Simple_repeat 1 180 0 957 188 39 19 chr20 16638692 16638900 -55514982 + MIR SINE MIR 19 230 -32 324 0 0 0 chr20 16640154 16640190 -55513692 + (CA)n Simple_repeat Simple_repeat 2 37 0 184 121 96 0 chr20 16641887 16641970 -55511912 + (TTAAA)n Simple_repeat Simple_repeat 4 94 0 422 268 107 39 chr20 16642033 16642238 -55511644 - L2 LINE L2 -62 3251 3033 569 286 155 5 chr20 16642243 16642456 -55511426 - MIR SINE MIR -5 257 13 180 211 0 105 chr20 16642547 16642604 -55511278 + MIR SINE MIR 57 107 -155 297 333 0 18 chr20 16642627 16642741 -55511141 + L2 LINE L2 3201 3312 -1 282 29 0 0 chr20 16644509 16644544 -55509338 + (TCTA)n Simple_repeat Simple_repeat 1 35 0 1516 211 49 59 chr20 16644779 16645181 -55508701 - MLT1F1 LTR MaLR 0 567 209 1272 234 130 37 chr20 16645181 16645643 -55508239 + MLT1D LTR MaLR 1 505 0 1516 211 49 59 chr20 16645643 16645845 -55508037 - MLT1F1 LTR MaLR -358 209 6 406 342 87 6 chr20 16646276 16646437 -55507445 + MIR3 SINE MIR 16 189 -19 355 312 30 40 chr20 16646579 16646778 -55507104 + L2 LINE L2 3117 3313 0 412 367 20 15 chr20 16648144 16648343 -55505539 - L2 LINE L2 0 3313 3114 783 175 181 0 chr20 16648463 16648623 -55505259 - MER5A DNA MER1_type 0 189 1 2137 110 3 13 chr20 16649496 16649805 -55504077 + AluSx SINE Alu 1 306 -6 907 217 44 0 chr20 16649823 16650003 -55503879 - MER58A DNA MER1_type 0 224 37 724 255 214 25 chr20 16651253 16651727 -55502155 - L2 LINE L2 0 3313 2772 2054 148 33 9 chr20 16653923 16654186 -55499696 - MER7A DNA MER2_type -2692 346 74 2137 140 20 8 chr20 16654186 16654543 -55499339 + MER46B DNA MER2_type 1 236 0 2054 148 33 9 chr20 16654543 16654616 -55499266 - MER7A DNA MER2_type -2964 74 4 291 130 29 14 chr20 16655518 16655587 -55498295 + (TA)n Simple_repeat Simple_repeat 2 71 0 22 0 0 0 chr20 16656042 16656064 -55497818 + GC_rich Low_complexity Low_complexity 1 22 0 728 257 45 20 chr20 16656102 16656304 -55497578 + MER63A DNA MER1_type 2 208 -2 192 77 0 0 chr20 16656977 16657003 -55496879 + (TTA)n Simple_repeat Simple_repeat 2 27 0 206 322 0 56 chr20 16657344 16657434 -55496448 + MIR SINE MIR 146 230 -32 2451 84 3 0 chr20 16657534 16657842 -55496040 + AluSp SINE Alu 1 309 -4 393 276 96 52 chr20 16657876 16658220 -55495662 + L1MC4a LINE L1 5606 5964 -157 272 180 34 11 chr20 16658224 16658313 -55495569 + (TA)n Simple_repeat Simple_repeat 2 92 0 259 255 193 55 chr20 16658733 16658878 -55495004 - MIR SINE MIR -87 175 11 2414 243 96 17 chr20 16658966 16659769 -55494113 - L1ME2 LINE L1 -16 6082 5217 453 267 30 55 chr20 16659775 16660186 -55493696 - L1ME2 LINE L1 -5150 920 530 475 324 56 59 chr20 16660451 16660859 -55493023 - L1ME2 LINE L1 -5617 453 47 361 334 46 66 chr20 16661095 16661520 -55492362 + L2 LINE L2 2661 3105 -167 1137 306 63 5 chr20 16662312 16662737 -55491145 + MLT1J2 LTR MaLR 1 450 0 12909 89 5 11 chr20 16663795 16665656 -55488226 - L1P LINE L1 -2807 3339 1490 387 254 99 49 chr20 16666162 16666304 -55487578 + MIR SINE MIR 110 258 -4 227 288 89 89 chr20 16666695 16666767 -55487115 - MIR SINE MIR -50 212 141 2399 97 0 3 chr20 16666767 16667076 -55486806 - AluSq SINE Alu -5 308 1 227 288 89 89 chr20 16667076 16667194 -55486688 - MIR SINE MIR -120 142 22 * 251 388 14 14 chr20 16667192 16667339 -55486543 + MER5A DNA MER1_type 38 184 -5 370 262 23 45 chr20 16667705 16667953 -55485929 + Charlie7 DNA MER1_type 21 2610 -2 511 206 57 43 chr20 16667993 16668134 -55485748 + MIR SINE MIR 110 252 -10 2033 252 85 6 chr20 16668136 16668628 -55485254 + MLT1H LTR MaLR 1 531 -18 183 42 0 0 chr20 16668632 16668656 -55485226 + (CAT)n Simple_repeat Simple_repeat 3 26 0 260 238 32 0 chr20 16669536 16669599 -55484283 + MLT1L LTR MaLR 1 65 -550 26 0 0 0 chr20 16669766 16669792 -55484090 + AT_rich Low_complexity Low_complexity 1 26 0 1752 148 28 28 chr20 16672545 16672835 -55481047 - AluJo SINE Alu -18 294 5 218 323 97 32 chr20 16675492 16675585 -55478297 - L2 LINE L2 0 3272 3174 414 332 86 5 chr20 16675794 16675981 -55477901 + MIR SINE MIR 20 221 -41 378 200 0 78 chr20 16676989 16677104 -55476778 - L1MC4 LINE L1 -2 8040 7935 363 44 0 0 chr20 16677148 16677193 -55476689 + (TG)n Simple_repeat Simple_repeat 2 46 0 6111 120 19 7 chr20 16677233 16678559 -55475323 - L1PA13 LINE L1 -20 6143 4804 315 227 93 0 chr20 16678565 16678662 -55475220 - L1MC4 LINE L1 -279 7763 7658 5333 138 8 13 chr20 16679045 16680166 -55473716 + L1PA16 LINE L1 5037 6153 -13 23 54 0 0 chr20 16680905 16680942 -55472940 + AT_rich Low_complexity Low_complexity 1 37 0 312 259 63 21 chr20 16681411 16681554 -55472328 - L1ME4a LINE L1 -2 6119 5971 846 234 11 5 chr20 16681585 16681769 -55472113 + MER5A DNA MER1_type 4 188 -1 21 0 0 0 chr20 16681769 16681790 -55472092 + AT_rich Low_complexity Low_complexity 1 21 0 1753 146 7 4 chr20 16681800 16682106 -55471776 + AluSx SINE Alu 1 307 0 315 307 44 44 chr20 16684380 16684517 -55469365 + MIR3 SINE MIR 72 208 0 205 285 21 111 chr20 16684570 16684714 -55469168 + MIR SINE MIR 16 146 -62 365 81 16 0 chr20 16685331 16685393 -55468489 + (CA)n Simple_repeat Simple_repeat 2 64 0 2199 111 3 0 chr20 16686151 16686448 -55467434 - AluSx SINE Alu -14 298 1 21 0 0 0 chr20 16686584 16686605 -55467277 + AT_rich Low_complexity Low_complexity 1 21 0 193 200 0 0 chr20 16686605 16686640 -55467242 - MIR SINE MIR -27 235 201 856 281 65 8 chr20 16686650 16686978 -55466904 - LTR16C LTR ERVL -14 477 79 1652 159 0 18 chr20 16687057 16687195 -55466687 + AluJo SINE Alu 1 133 -179 2521 60 0 0 chr20 16687195 16687496 -55466386 + AluY SINE Alu 1 301 -10 1652 159 0 18 chr20 16687496 16687633 -55466249 + AluJo SINE Alu 133 271 -41 366 304 72 29 chr20 16687648 16687786 -55466096 - MIR SINE MIR -117 145 2 366 279 132 0 chr20 16689498 16689634 -55464248 - MER103 DNA DNA -11 155 2 312 302 112 12 chr20 16691882 16692051 -55461831 + L1MC4a LINE L1 5762 5947 -1861 32 109 0 0 chr20 16694600 16694737 -55459145 + AT_rich Low_complexity Low_complexity 1 137 0 292 302 116 0 chr20 16696657 16696786 -55457096 - MIR SINE MIR -13 249 106 211 274 0 0 chr20 16696806 16696857 -55457025 + (TCCA)n Simple_repeat Simple_repeat 2 52 0 333 225 45 22 chr20 16696857 16696946 -55456936 - L2 LINE L2 0 3313 3223 28 29 0 0 chr20 16697688 16697723 -55456159 + AT_rich Low_complexity Low_complexity 1 35 0 15538 129 12 5 chr20 16697731 16700110 -55453772 + Tigger1 DNA MER2_type 23 2418 0 196 289 79 40 chr20 16700198 16700274 -55453608 + L2 LINE L2 3138 3216 -56 1434 249 56 7 chr20 16700276 16700722 -55453160 + Charlie4a DNA MER1_type 40 507 -1 740 232 59 72 chr20 16701686 16701740 -55452142 - MIR SINE MIR -21 241 188 2200 112 0 7 chr20 16701740 16702044 -55451838 - AluSc SINE Alu -7 302 1 740 232 59 72 chr20 16702044 16702226 -55451656 - MIR SINE MIR -74 188 8 222 299 13 13 chr20 16704284 16704361 -55449521 + GA-rich Low_complexity Low_complexity 2 78 0 233 408 125 0 chr20 16706331 16706483 -55447399 - L2 LINE L2 -4 3268 3098 1381 229 107 36 chr20 16707337 16707804 -55446078 + MLT1D LTR MaLR 5 504 -1 22 35 0 0 chr20 16708426 16708455 -55445427 + AT_rich Low_complexity Low_complexity 1 29 0 1422 152 166 73 chr20 16708873 16708915 -55444967 - LTR54B LTR ERV1 -2 496 459 2411 65 3 16 chr20 16708915 16709224 -55444658 - AluY SINE Alu -6 305 1 1422 152 166 73 chr20 16709224 16709634 -55444248 - LTR54B LTR ERV1 -39 459 2 32 26 0 0 chr20 16709640 16709679 -55444203 + AT_rich Low_complexity Low_complexity 1 39 0 189 0 0 0 chr20 16709799 16709820 -55444062 + (CAAAAA)n Simple_repeat Simple_repeat 3 23 0 23 0 0 0 chr20 16709960 16709983 -55443899 + AT_rich Low_complexity Low_complexity 1 23 0 551 309 63 16 chr20 16710530 16710709 -55443173 + MIR SINE MIR 2 192 -70 429 20 0 0 chr20 16710709 16710759 -55443123 + (TAGA)n Simple_repeat Simple_repeat 3 52 0 551 309 63 16 chr20 16710759 16710770 -55443112 + MIR SINE MIR 192 201 -61 215 31 31 0 chr20 16711533 16711565 -55442317 + (CA)n Simple_repeat Simple_repeat 2 34 0 241 340 101 0 chr20 16711738 16711897 -55441985 + L3b LINE CR1 1114 1288 -295 421 275 170 70 chr20 16711936 16712489 -55441393 + L2 LINE L2 2139 2746 -568 208 316 46 139 chr20 16712512 16712965 -55440917 + L2 LINE L2 2862 3272 0 1100 341 22 17 chr20 16713114 16713530 -55440352 - LTR16A LTR ERVL -15 435 18 1080 336 42 40 chr20 16713655 16714555 -55439327 - ERVL LTR ERVL -90 5359 4511 2051 141 0 10 chr20 16714589 16714895 -55438987 + AluSg SINE Alu 1 303 -7 1510 309 97 26 chr20 16714990 16715361 -55438521 - ERVL LTR ERVL -1360 4294 3951 2225 115 10 0 chr20 16715361 16715665 -55438217 - AluSq SINE Alu -6 307 1 1510 309 97 26 chr20 16715665 16716870 -55437012 - ERVL LTR ERVL -1703 3951 2484 1314 305 69 9 chr20 16716938 16717404 -55436478 - ERVL LTR ERVL -3614 1382 889 893 291 20 20 chr20 16717536 16717832 -55436050 - LTR16A LTR ERVL -139 311 16 26 93 0 0 chr20 16718589 16718664 -55435218 + AT_rich Low_complexity Low_complexity 1 75 0 246 216 72 62 chr20 16718698 16718795 -55435087 - MIR SINE MIR -92 170 73 643 220 70 21 chr20 16719481 16719667 -55434215 - MIR SINE MIR 0 262 68 978 259 115 15 chr20 16720267 16720607 -55433275 - MLT1I LTR MaLR -3 406 33 577 313 60 18 chr20 16720740 16720957 -55432925 + MLT1I LTR MaLR 168 393 -16 991 129 11 11 chr20 16721136 16721160 -55432722 + CT-rich Low_complexity Low_complexity 1 202 0 991 129 11 11 chr20 16721160 16721338 -55432544 + CT-rich Low_complexity Low_complexity 1 178 0 248 270 153 44 chr20 16721703 16721840 -55432042 - MIR SINE MIR -48 214 63 542 322 135 4 chr20 16722170 16722400 -55431482 - MIR SINE MIR -1 261 2 322 309 0 0 chr20 16722512 16722606 -55431276 - L2 LINE L2 0 3272 3179 186 321 76 23 chr20 16724911 16725042 -55428840 + L2 LINE L2 2598 2735 -579 1178 268 32 60 chr20 16725345 16725808 -55428074 + LTR16A LTR ERVL 1 450 0 295 323 23 31 chr20 16726056 16726186 -55427696 - L2 LINE L2 -1 3312 3184 559 153 123 106 chr20 16726210 16726380 -55427502 - MER5B DNA MER1_type -5 173 1 807 279 18 18 chr20 16726392 16726618 -55427264 - MIR SINE MIR -29 233 8 25 0 0 0 chr20 16726665 16726690 -55427192 + AT_rich Low_complexity Low_complexity 1 25 0 218 188 21 0 chr20 16729076 16729124 -55424758 - L2 LINE L2 -26 3287 3239 180 0 0 0 chr20 16729240 16729260 -55424622 + (A)n Simple_repeat Simple_repeat 1 20 0 723 269 66 51 chr20 16729367 16729624 -55424258 - MIR SINE MIR 0 262 2 625 293 134 69 chr20 16731278 16732147 -55421735 + L2 LINE L2 2374 3301 -12 204 40 0 0 chr20 16732148 16732173 -55421709 + (TGAA)n Simple_repeat Simple_repeat 3 27 0 2198 123 0 10 chr20 16732434 16732742 -55421140 - AluSq SINE Alu -8 305 1 224 250 0 0 chr20 16732810 16732862 -55421020 + T-rich Low_complexity Low_complexity 1 52 0 437 360 17 21 chr20 16734288 16734521 -55419361 - MIR SINE MIR -24 238 7 1818 186 101 14 chr20 16735150 16735575 -55418307 + MLT1C LTR MaLR 6 467 0 378 341 88 6 chr20 16736871 16737053 -55416829 + MIR SINE MIR 45 241 -21 181 343 14 14 chr20 16738152 16738225 -55415657 - L2 LINE L2 -5 3267 3195 2179 163 139 16 chr20 16738230 16738731 -55415151 + MER61D LTR ERV1 1 1289 0 1073 166 30 98 chr20 16738988 16739239 -55414643 + ORSL DNA AcHobo 1 231 -44 1531 128 149 10 chr20 16739239 16739535 -55414347 + MER1B DNA MER1_type 1 337 0 1073 166 30 98 chr20 16739535 16739578 -55414304 + ORSL DNA AcHobo 231 275 0 294 282 61 38 chr20 16739655 16739786 -55414096 - MIR SINE MIR -123 139 6 556 296 115 26 chr20 16739984 16740214 -55413668 + MIR SINE MIR 12 262 0 272 208 0 14 chr20 16740316 16740388 -55413494 + (TA)n Simple_repeat Simple_repeat 2 72 0 203 369 0 0 chr20 16740468 16740533 -55413349 - MIR SINE MIR -111 151 87 22 0 0 0 chr20 16741530 16741552 -55412330 + AT_rich Low_complexity Low_complexity 1 22 0 543 261 69 27 chr20 16743857 16744045 -55409837 - MIR SINE MIR -60 202 7 198 0 0 0 chr20 16744278 16744300 -55409582 + (TA)n Simple_repeat Simple_repeat 2 23 0 2334 47 0 17 chr20 16744323 16744622 -55409260 + AluY SINE Alu 1 294 -17 304 312 7 36 chr20 16744965 16745103 -55408779 + L1ME LINE L1 5566 5699 -422 1839 146 23 43 chr20 16745190 16745540 -55408342 + MER61A LTR ERV1 1 343 0 2241 104 0 0 chr20 16745801 16746099 -55407783 - AluSg SINE Alu -10 300 3 22 35 0 0 chr20 16746250 16746279 -55407603 + AT_rich Low_complexity Low_complexity 1 29 0 1292 151 4 27 chr20 16748065 16748290 -55405592 + AluJb SINE Alu 82 301 -11 220 255 0 0 chr20 16748874 16748921 -55404961 + L2 LINE L2 3255 3301 -12 25 0 0 0 chr20 16750617 16750642 -55403240 + AT_rich Low_complexity Low_complexity 1 25 0 470 304 91 71 chr20 16751010 16751870 -55402012 + L1MDa LINE L1 2462 3371 -3169 694 95 0 12 chr20 16751951 16752162 -55401720 + AluSg1 SINE Alu 1 253 -56 277 266 54 38 chr20 16752608 16752792 -55401090 + L1MDa LINE L1 3985 4171 -2369 * 481 197 24 3 chr20 16752791 16752905 -55400977 + L1ME1 LINE L1 6065 6184 0 328 289 0 19 chr20 16752915 16753019 -55400863 + L1MDa LINE L1 4152 4253 -2287 527 338 120 40 chr20 16753119 16753944 -55399938 + L1MDa LINE L1 4350 5240 -1300 255 61 0 0 chr20 16754444 16754477 -55399405 + (CA)n Simple_repeat Simple_repeat 2 34 0 220 244 0 0 chr20 16755749 16755794 -55398088 - MIR3 SINE MIR -1 207 163 22 35 0 0 chr20 16755933 16755962 -55397920 + AT_rich Low_complexity Low_complexity 1 29 0 1455 174 104 20 chr20 16756027 16756372 -55397510 + MLT1A2 LTR MaLR 1 374 0 393 291 57 14 chr20 16756969 16757110 -55396772 - MIR SINE MIR -31 231 85 599 315 70 39 chr20 16757110 16757494 -55396388 - LTR16C LTR ERVL -2 489 94 474 308 34 72 chr20 16758546 16758838 -55395044 - LTR16C LTR ERVL -21 470 190 22 56 0 0 chr20 16759097 16759133 -55394749 + AT_rich Low_complexity Low_complexity 1 36 0 857 242 0 0 chr20 16759307 16759485 -55394397 - MER5B DNA MER1_type 0 178 1 2845 9 0 0 chr20 16761272 16761588 -55392294 + AluYb8 SINE Alu 1 316 -2 40 0 0 0 chr20 16762536 16762576 -55391306 + AT_rich Low_complexity Low_complexity 1 40 0 308 309 93 7 chr20 16762652 16762791 -55391091 + MIR3 SINE MIR 2 152 -56 225 0 0 0 chr20 16762876 16762901 -55390981 + (TTCTC)n Simple_repeat Simple_repeat 1 25 0 1772 176 3 13 chr20 16762901 16763214 -55390668 - AluJo SINE Alu 0 312 3 28 29 0 0 chr20 16764991 16765026 -55388856 + AT_rich Low_complexity Low_complexity 1 35 0 2430 173 28 10 chr20 16765166 16765668 -55388214 + Charlie1b DNA MER1_type 7 517 -6 2808 13 0 0 chr20 16765670 16765983 -55387899 - AluYb8 SINE Alu -5 313 1 39 38 0 0 chr20 16766034 16766087 -55387795 + AT_rich Low_complexity Low_complexity 1 53 0 243 0 0 0 chr20 16766310 16766337 -55387545 + (TGAA)n Simple_repeat Simple_repeat 4 30 0 455 305 26 7 chr20 16767301 16767452 -55386430 - L2 LINE L2 0 3313 3160 206 260 163 42 chr20 16767461 16767587 -55386295 - MIR SINE MIR -92 116 30 45 34 0 0 chr20 16767794 16767853 -55386029 + AT_rich Low_complexity Low_complexity 1 59 0 967 228 137 20 chr20 16767853 16768415 -55385467 - L1ME3A LINE L1 0 6170 5511 414 272 5 94 chr20 16769557 16769748 -55384134 + MER5A DNA MER1_type 7 180 -9 1736 238 104 24 chr20 16770268 16770815 -55383067 - L1ME3A LINE L1 -75 6095 5505 246 281 40 89 chr20 16773276 16773591 -55380291 - L1MC/D LINE L1 -239 5882 5634 892 214 12 0 chr20 16773591 16773759 -55380123 + FAM SINE Alu 1 170 -5 246 281 40 89 chr20 16773759 16773847 -55380035 - L1MC/D LINE L1 -487 5634 5543 412 326 69 17 chr20 16773908 16774141 -55379741 - LTR16A LTR ERVL -179 271 27 822 179 21 0 chr20 16774266 16774411 -55379471 - FAM SINE Alu -16 169 22 435 247 39 9 chr20 16774419 16774632 -55379250 - L1MC/D LINE L1 -750 5420 5201 345 264 115 46 chr20 16774662 16774836 -55379046 - LTR33 LTR ERVL -8 513 328 991 175 166 6 chr20 16775103 16775337 -55378545 + L1MD1 LINE L1 5795 6068 -174 5484 152 19 12 chr20 16775357 16776918 -55376964 - L1PB4 LINE L1 0 6156 4586 268 155 35 35 chr20 16776917 16776975 -55376907 + L1MD1 LINE L1 6072 6129 -113 * 286 137 0 27 chr20 16776971 16777044 -55376838 + L1MDb LINE L1 1120 1190 -5219 686 138 49 0 chr20 16777045 16777168 -55376714 + L1MD1 LINE L1 6106 6234 -8 375 222 0 12 chr20 16777215 16777296 -55376586 - L1MC/D LINE L1 -719 5523 5444 21 57 0 0 chr20 16779852 16779887 -55373995 + AT_rich Low_complexity Low_complexity 1 35 0 279 0 0 0 chr20 16780373 16780404 -55373478 + (TG)n Simple_repeat Simple_repeat 2 32 0 401 318 46 4 chr20 16780949 16781188 -55372694 + HAL1b LINE L1 658 906 -442 33 66 0 0 chr20 16781359 16781420 -55372462 + AT_rich Low_complexity Low_complexity 1 61 0 1112 254 33 3 chr20 16782020 16782355 -55371527 - L1MDa LINE L1 -3654 2886 2542 4024 191 42 8 chr20 16782356 16783824 -55370058 - L1MB8 LINE L1 -8 6170 4652 629 193 103 70 chr20 16783822 16784065 -55369817 - L1MDa LINE L1 -3983 2557 2307 * 846 306 61 19 chr20 16784142 16784505 -55369377 - L1MDa LINE L1 -6144 396 19 327 272 116 14 chr20 16785123 16785270 -55368612 + MIR SINE MIR 88 249 -13 1723 106 20 27 chr20 16785446 16785739 -55368143 - L1MA1 LINE L1 -1 6301 6011 7173 126 37 14 chr20 16786987 16788189 -55365693 + Tigger3b DNA MER2_type 1 1229 -2 227 352 19 76 chr20 16789920 16790025 -55363857 - L2 LINE L2 -23 3249 3151 719 156 19 31 chr20 16790105 16790367 -55363515 - MLT1A1 LTR MaLR -62 303 1 281 78 31 31 chr20 16790369 16790433 -55363449 + (GGGAA)n Simple_repeat Simple_repeat 4 67 0 2214 93 21 0 chr20 16790490 16790780 -55363102 + AluSx SINE Alu 1 296 -16 341 376 37 0 chr20 16790929 16791038 -55362844 + L2 LINE L2 3158 3270 -2 21 0 0 0 chr20 16791305 16791326 -55362556 + AT_rich Low_complexity Low_complexity 1 21 0 598 254 248 39 chr20 16791640 16791947 -55361935 + LTR16C LTR ERVL 79 449 -42 2729 13 0 0 chr20 16791973 16792276 -55361606 - AluYa5 SINE Alu -8 303 1 1137 289 107 14 chr20 16792568 16793056 -55360826 + MLT1H LTR MaLR 17 549 0 1570 266 111 5 chr20 16795681 16796113 -55357769 + LTR16C LTR ERVL 6 483 -8 219 69 0 0 chr20 16796118 16796147 -55357735 + (CAT)n Simple_repeat Simple_repeat 2 30 0 191 283 152 82 chr20 16796153 16796397 -55357485 - MIR SINE MIR 0 262 2 419 139 69 14 chr20 16796988 16797060 -55356822 + Tigger5 DNA MER2_type 2248 2323 0 655 221 23 0 chr20 16797373 16797504 -55356378 + Tigger7 DNA MER2_type 108 241 -309 588 178 20 0 chr20 16797513 16797614 -55356268 + Tigger7 DNA MER2_type 2385 2487 0 24 32 0 0 chr20 16797705 16797736 -55356146 + AT_rich Low_complexity Low_complexity 1 31 0 364 214 39 29 chr20 16798152 16798255 -55355627 - L1ME2 LINE L1 -20 6144 6041 502 300 6 12 chr20 16798565 16798725 -55355157 - Charlie8 DNA MER1_type -2208 209 51 208 0 0 59 chr20 16799095 16799129 -55354753 + (TG)n Simple_repeat Simple_repeat 2 33 0 469 302 159 26 chr20 16799131 16799439 -55354443 - L2 LINE L2 -37 3276 2928 849 276 85 55 chr20 16801692 16802334 -55351548 - L2 LINE L2 -15 3298 2631 455 239 115 53 chr20 16802460 16802686 -55351196 + MIR SINE MIR 9 248 -14 767 313 123 12 chr20 16803191 16803517 -55350365 + LTR16C LTR ERVL 130 491 0 357 82 0 0 chr20 16804037 16804086 -55349796 + (CA)n Simple_repeat Simple_repeat 1 49 0 2515 71 0 3 chr20 16805183 16805491 -55348391 - AluSq SINE Alu -6 307 1 373 368 83 24 chr20 16805528 16805781 -55348101 - L3 LINE CR1 -9 1568 1301 1464 155 164 49 chr20 16807320 16807765 -55346117 - LTR54B LTR ERV1 -2 496 1 2340 51 3 20 chr20 16808201 16808494 -55345388 + AluY SINE Alu 12 299 -12 1043 218 147 70 chr20 16809095 16809564 -55344318 - MLT1D LTR MaLR 0 505 1 874 244 205 32 chr20 16810392 16810802 -55343080 + LTR16C LTR ERVL 11 491 0 1357 275 66 54 chr20 16810931 16811524 -55342358 + MLT1L LTR MaLR 1 600 -15 183 290 70 30 chr20 16811818 16811918 -55341964 + MIR SINE MIR 156 259 -3 1923 77 0 129 chr20 16812261 16812601 -55341281 + AluSp SINE Alu 3 298 -5 3687 128 79 65 chr20 16813280 16814054 -55339828 + LTR1 LTR ERV1 1 785 0 513 313 78 22 chr20 16815116 16815346 -55338536 + MIR SINE MIR 19 261 -1 352 283 10 0 chr20 16816541 16816640 -55337242 - MER94 DNA DNA -34 100 1 490 244 0 39 chr20 16817761 16817888 -55335994 - L2 LINE L2 -1 3312 3191 480 319 51 7 chr20 16819102 16819240 -55334642 - L2 LINE L2 -4 3268 3125 259 278 0 33 chr20 16819244 16819334 -55334548 + MIR SINE MIR 176 262 0 312 211 0 0 chr20 16819726 16819802 -55334080 + (TG)n Simple_repeat Simple_repeat 2 77 0 219 273 45 82 chr20 16819979 16820089 -55333793 - L2 LINE L2 -188 3084 2979 5177 129 13 4 chr20 16820491 16821315 -55332567 - L1PA15 LINE L1 -13 6152 5321 382 313 60 11 chr20 16822065 16822330 -55331552 + L1 LINE L1 3868 4145 -2001 368 308 40 31 chr20 16822419 16822646 -55331236 + L1 LINE L1 4280 4508 -1638 257 276 86 9 chr20 16822914 16823019 -55330863 + L1 LINE L1 4882 4994 -1152 7120 52 20 0 chr20 16823028 16823962 -55329920 - L1PA7 LINE L1 -15 6139 5201 3752 65 2 0 chr20 16823962 16824455 -55329427 + L1PA7 LINE L1 4705 5198 -948 21 82 0 0 chr20 16824462 16824511 -55329371 + AT_rich Low_complexity Low_complexity 1 49 0 198 0 0 0 chr20 16824620 16824642 -55329240 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 52 58 0 0 chr20 16824653 16824740 -55329142 + AT_rich Low_complexity Low_complexity 1 87 0 3268 160 39 19 chr20 16824740 16825214 -55328668 - L1MA7 LINE L1 -21 6270 5778 375 23 0 0 chr20 16825214 16825258 -55328624 + (TG)n Simple_repeat Simple_repeat 2 45 0 3268 160 39 19 chr20 16825258 16825421 -55328461 - L1MA7 LINE L1 -513 5778 5620 751 296 111 19 chr20 16826085 16826447 -55327435 - MLT1J2 LTR MaLR 0 450 56 252 86 0 0 chr20 16826781 16826816 -55327066 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 24 0 0 0 chr20 16829264 16829288 -55324594 + AT_rich Low_complexity Low_complexity 1 24 0 1298 89 0 5 chr20 16829289 16829479 -55324403 - L1MA1 LINE L1 -1 6301 6113 786 275 42 8 chr20 16830950 16831190 -55322692 - MIR SINE MIR -3 259 12 469 191 16 26 chr20 16831658 16831802 -55322080 - L1ME4a LINE L1 -292 5829 5704 223 211 19 0 chr20 16831814 16831866 -55322016 + (TAGA)n Simple_repeat Simple_repeat 3 55 0 361 305 11 11 chr20 16832017 16832112 -55321770 + L2 LINE L2 3192 3286 -27 1667 241 55 104 chr20 16832112 16832872 -55321010 - L1M4 LINE L1 -5468 1074 352 441 230 25 81 chr20 16832996 16833157 -55320725 - L1M4b LINE L1 -5286 1573 1422 * 789 191 74 78 chr20 16833145 16833376 -55320506 - L1MB3 LINE L1 -2 6181 5952 264 157 29 29 chr20 16833425 16833495 -55320387 + L1MDa LINE L1 1518 1587 -4953 684 147 0 37 chr20 16833501 16833637 -55320245 - L1MB3 LINE L1 -98 6085 5955 299 206 108 20 chr20 16833631 16833733 -55320149 - L1M4b LINE L1 -5417 1442 1332 * 1972 137 0 3 chr20 16833752 16834044 -55319838 - AluY SINE Alu -20 291 1 275 266 40 145 chr20 16834247 16834495 -55319387 - L1M4b LINE L1 -5678 1177 956 261 259 127 78 chr20 16834704 16834909 -55318973 - L1M4b LINE L1 -6625 234 20 1090 207 0 0 chr20 16834946 16835134 -55318748 + MER5A DNA MER1_type 1 188 -1 554 307 88 13 chr20 16836256 16836494 -55317388 + MIR SINE MIR 5 260 -2 352 359 16 8 chr20 16836510 16836638 -55317244 - L2 LINE L2 -3 3310 3182 21 0 0 0 chr20 16839324 16839345 -55314537 + AT_rich Low_complexity Low_complexity 1 21 0 314 211 40 0 chr20 16840619 16840695 -55313187 + L2 LINE L2 2976 3054 -218 397 196 9 9 chr20 16840890 16841002 -55312880 + GA-rich Low_complexity Low_complexity 3 114 0 1936 149 0 14 chr20 16841168 16841464 -55312418 - AluJb SINE Alu -20 292 1 212 217 0 0 chr20 16842257 16842303 -55311579 + L2 LINE L2 3268 3313 0 614 124 0 0 chr20 16842414 16842511 -55311371 - L1PB3 LINE L1 0 6154 6058 23 0 0 0 chr20 16842926 16842949 -55310933 + AT_rich Low_complexity Low_complexity 1 23 0 233 347 31 0 chr20 16843671 16843769 -55310113 + MIR3 SINE MIR 5 105 -103 654 224 159 101 chr20 16845143 16845571 -55308311 + MLT1J LTR MaLR 22 474 -37 369 216 46 92 chr20 16846004 16846157 -55307725 - MIR SINE MIR -41 221 76 222 177 32 32 chr20 16846409 16846471 -55307411 + GA-rich Low_complexity Low_complexity 3 64 0 23 0 0 0 chr20 16847046 16847069 -55306813 + AT_rich Low_complexity Low_complexity 1 23 0 916 101 0 16 chr20 16850726 16850855 -55303027 + AluSg/x SINE Alu 173 299 -11 186 43 0 0 chr20 16851906 16851929 -55301953 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 279 233 0 81 chr20 16851937 16852023 -55301859 - MIR3 SINE MIR -46 162 84 266 339 119 0 chr20 16852985 16853094 -55300788 + L2 LINE L2 3190 3311 -2 187 292 45 22 chr20 16853414 16853503 -55300379 + MIR SINE MIR 166 256 -6 2251 115 3 0 chr20 16853894 16854199 -55299683 + AluSq SINE Alu 1 306 -7 773 318 122 13 chr20 16854210 16854676 -55299206 + LTR33 LTR ERVL 1 517 -4 37 0 0 0 chr20 16854860 16854897 -55298985 + AT_rich Low_complexity Low_complexity 1 37 0 2563 56 0 3 chr20 16854989 16855293 -55298589 - AluY SINE Alu -8 303 1 261 243 29 14 chr20 16855450 16855520 -55298362 - L1MC/D LINE L1 -2042 5766 5696 264 77 0 0 chr20 16855524 16855563 -55298319 + (TG)n Simple_repeat Simple_repeat 2 40 0 4837 110 7 46 chr20 16855600 16856421 -55297461 + L1MA2 LINE L1 5516 6304 0 22 94 0 0 chr20 16856469 16856533 -55297349 + AT_rich Low_complexity Low_complexity 1 64 0 2409 84 3 0 chr20 16857007 16857317 -55296565 + AluSp SINE Alu 1 311 -2 186 311 16 16 chr20 16857454 16857515 -55296367 - L2 LINE L2 -1 3271 3211 522 314 63 6 chr20 16857676 16857851 -55296031 - MIR SINE MIR -64 198 14 538 282 46 6 chr20 16858802 16858976 -55294906 - MIR SINE MIR -13 249 69 23 0 0 0 chr20 16860148 16860171 -55293711 + AT_rich Low_complexity Low_complexity 1 23 0 202 244 24 0 chr20 16860365 16860406 -55293476 + MIR SINE MIR 78 119 -143 23 54 0 0 chr20 16860406 16860443 -55293439 + AT_rich Low_complexity Low_complexity 1 37 0 25 91 0 10 chr20 16860522 16860541 -55293341 + AT_rich Low_complexity Low_complexity 1 19 -79 1531 155 50 32 chr20 16860541 16860818 -55293064 + AluJo SINE Alu 1 282 -30 25 91 0 10 chr20 16860818 16860897 -55292985 + AT_rich Low_complexity Low_complexity 19 98 0 1615 228 89 78 chr20 16861002 16862017 -55291865 + L1MDb LINE L1 150 1066 -5477 716 193 123 60 chr20 16862005 16862305 -55291577 + L1MDb LINE L1 1471 1789 -4751 * 1344 224 27 100 chr20 16862305 16862706 -55291176 + LTR16A LTR ERVL 78 449 -1 30 0 0 0 chr20 16862987 16863017 -55290865 + AT_rich Low_complexity Low_complexity 1 30 0 2195 116 0 3 chr20 16864057 16864351 -55289531 + AluSx SINE Alu 2 294 -18 3189 209 46 54 chr20 16864767 16866401 -55287481 + L1MA6 LINE L1 2616 4229 -3336 * 5570 153 29 33 chr20 16866397 16867683 -55286199 + L1MA6 LINE L1 6428 7719 0 23 0 0 0 chr20 16867689 16867712 -55286170 + AT_rich Low_complexity Low_complexity 1 23 0 242 196 0 0 chr20 16867806 16867857 -55286025 + (CA)n Simple_repeat Simple_repeat 1 51 0 268 312 0 46 chr20 16867946 16868055 -55285827 + L2 LINE L2 2978 3081 -191 24 0 0 0 chr20 16868102 16868126 -55285756 + AT_rich Low_complexity Low_complexity 1 24 0 194 269 128 0 chr20 16868237 16868315 -55285567 + MIR SINE MIR 175 262 0 14372 139 17 121 chr20 16869335 16871903 -55281979 + L1P LINE L1 12 2135 -4011 1978 122 4 0 chr20 16871903 16872174 -55281708 + AluSg SINE Alu 1 272 -38 14372 139 17 121 chr20 16872174 16873038 -55280844 + L1P LINE L1 2135 3087 -3059 * 43741 43 5 9 chr20 16873037 16879210 -55274672 + L1PA4 LINE L1 2 6152 -3 6455 99 4 6 chr20 16879206 16880176 -55273706 + L1P LINE L1 3072 4039 -2107 * 6722 40 0 0 chr20 16880176 16880974 -55272908 + L1PA7 LINE L1 5339 6141 -13 273 284 14 14 chr20 16881169 16881310 -55272572 + (TA)n Simple_repeat Simple_repeat 1 141 0 22 0 0 0 chr20 16881639 16881661 -55272221 + AT_rich Low_complexity Low_complexity 1 22 0 416 237 64 39 chr20 16881820 16881976 -55271906 - Charlie7 DNA MER1_type -754 1858 1699 555 243 47 27 chr20 16882007 16882155 -55271727 - MER21B LTR ERV1 -392 471 321 565 253 72 9 chr20 16882176 16882397 -55271485 - Charlie7 DNA MER1_type -927 1685 1451 2042 134 0 3 chr20 16882592 16882882 -55271000 - AluSx SINE Alu -10 302 14 2209 42 0 4 chr20 16883737 16883999 -55269883 + AluY SINE Alu 42 302 -9 30 27 0 0 chr20 16884947 16884984 -55268898 + AT_rich Low_complexity Low_complexity 1 37 0 2283 42 0 0 chr20 16885699 16885963 -55267919 + AluY SINE Alu 39 302 -9 261 254 134 0 chr20 16885991 16886058 -55267824 + MIR SINE MIR 77 152 -56 453 291 22 28 chr20 16886090 16886272 -55267610 + MLT1J LTR MaLR 326 506 -5 388 310 50 44 chr20 16886441 16886738 -55267144 + L1ME LINE L1 5298 5596 -2212 226 284 68 27 chr20 16886753 16886901 -55266981 + L1ME LINE L1 5753 5906 -215 188 211 39 148 chr20 16888605 16888733 -55265149 + MIR SINE MIR 13 126 -136 1382 248 39 45 chr20 16888910 16889252 -55264630 + LTR16C LTR ERVL 3 343 -148 1982 130 7 23 chr20 16889252 16889553 -55264329 - AluSx SINE Alu -16 296 1 1382 248 39 45 chr20 16889553 16889702 -55264180 + LTR16C LTR ERVL 343 491 0 394 320 56 16 chr20 16890864 16890989 -55262893 + MIR SINE MIR 19 148 -114 214 211 70 56 chr20 16891234 16891305 -55262577 + L2 LINE L2 3234 3305 -8 2109 126 30 0 chr20 16892017 16892318 -55261564 - AluSx SINE Alu -2 310 1 333 82 0 0 chr20 16892687 16892736 -55261146 + (CA)n Simple_repeat Simple_repeat 2 50 0 2338 101 0 3 chr20 16893395 16893703 -55260179 + AluSg SINE Alu 1 307 -3 486 286 131 0 chr20 16894270 16894438 -55259444 + MIR SINE MIR 2 191 -71 488 278 240 38 chr20 16894578 16894945 -55258937 + MLT1J2 LTR MaLR 3 443 -7 2476 261 104 39 chr20 16895383 16896435 -55257447 - L2 LINE L2 -8 3305 1897 860 288 31 0 chr20 16896763 16896985 -55256897 - MIR SINE MIR 0 262 34 2185 125 0 0 chr20 16897116 16897413 -55256469 + AluSx SINE Alu 1 297 -15 2429 63 0 10 chr20 16897615 16897918 -55255964 - AluY SINE Alu -11 300 1 180 176 0 0 chr20 16898146 16898180 -55255702 + GA-rich Low_complexity Low_complexity 2 35 0 2166 138 0 0 chr20 16898420 16898725 -55255157 - AluSx SINE Alu -7 305 1 1083 275 149 23 chr20 16899235 16899624 -55254258 - MLT1H LTR MaLR 0 549 112 550 340 99 0 chr20 16899707 16899869 -55254013 + MER91A DNA MER1_type 18 195 -1 447 273 60 40 chr20 16900192 16900241 -55253641 - MIR SINE MIR -2 260 213 1380 135 36 0 chr20 16900241 16900463 -55253419 + MER30 DNA MER1_type 1 230 0 447 273 60 40 chr20 16900463 16900563 -55253319 - MIR SINE MIR -49 213 108 195 42 0 0 chr20 16900867 16900891 -55252991 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 909 288 28 4 chr20 16900921 16901171 -55252711 - MIR SINE MIR -6 256 1 4307 216 40 5 chr20 16901322 16902882 -55251000 + L1MA9 LINE L1 4655 6273 -39 2048 134 7 3 chr20 16903109 16903400 -55250482 - AluSq SINE Alu -21 292 1 246 300 94 81 chr20 16903796 16904019 -55249863 - MIR SINE MIR -2 260 35 190 426 45 13 chr20 16904065 16904220 -55249662 - L2 LINE L2 -31 3241 3082 1943 158 0 0 chr20 16904708 16905000 -55248882 + AluSx SINE Alu 3 294 -18 409 250 158 0 chr20 16905056 16905176 -55248706 + L2 LINE L2 3175 3313 0 1134 244 76 42 chr20 16905267 16905714 -55248168 + MLT1C LTR MaLR 6 467 0 891 220 203 10 chr20 16905826 16906122 -55247760 - L2 LINE L2 -1377 1937 1585 235 250 14 42 chr20 16907660 16907732 -55246150 + MIR SINE MIR 193 262 0 343 309 197 17 chr20 16908205 16908621 -55245261 - L2 LINE L2 -1 3312 2770 317 338 45 25 chr20 16908880 16909037 -55244845 + MIR3 SINE MIR 37 196 -12 321 309 73 9 chr20 16909356 16909466 -55244416 + MIR SINE MIR 5 121 -141 366 357 106 38 chr20 16909546 16909619 -55244263 + L2 LINE L2 2282 2349 -965 899 234 122 68 chr20 16909619 16910101 -55243781 - MLT1J LTR MaLR -3 508 1 366 357 106 38 chr20 16910101 16910528 -55243354 + L2 LINE L2 2349 2816 -498 929 279 52 47 chr20 16910649 16911054 -55242828 - LTR16C LTR ERVL -1 490 84 341 199 53 20 chr20 16913111 16913262 -55240620 + (TA)n Simple_repeat Simple_repeat 2 157 0 3268 278 146 35 chr20 16913633 16915595 -55238287 + HAL1 LINE L1 239 2418 -89 387 290 37 43 chr20 16915984 16916146 -55237736 - MER117 DNA MER1_type -4 193 33 27 49 0 0 chr20 16916442 16916483 -55237399 + AT_rich Low_complexity Low_complexity 1 41 0 2438 72 3 0 chr20 16916651 16916957 -55236925 + AluSp SINE Alu 1 307 -6 2382 66 0 3 chr20 16916994 16917295 -55236587 - AluY SINE Alu -11 300 1 275 272 52 99 chr20 16917332 16917545 -55236337 + L1M3 LINE L1 47 249 -6293 2352 225 50 20 chr20 16917734 16919148 -55234734 + L1M3 LINE L1 1940 3486 -3158 1795 234 17 19 chr20 16919176 16919654 -55234228 + L1M3 LINE L1 3829 4305 -2339 1745 183 0 45 chr20 16919654 16919720 -55234162 + L1M3 LINE L1 5624 5691 -987 1867 146 7 14 chr20 16919720 16920014 -55233868 + AluJo SINE Alu 1 292 -20 1745 183 0 45 chr20 16920014 16920462 -55233420 + L1M3 LINE L1 5691 6116 -562 400 128 0 9 chr20 16920468 16920545 -55233337 - L1M3 LINE L1 -519 5649 5577 21 0 0 0 chr20 16920551 16920572 -55233310 + AT_rich Low_complexity Low_complexity 1 21 0 580 234 129 24 chr20 16920643 16920891 -55232991 + L1ME4a LINE L1 5611 5884 -237 24 67 0 0 chr20 16921063 16921108 -55232774 + AT_rich Low_complexity Low_complexity 1 45 0 2333 94 3 0 chr20 16921359 16921668 -55232214 + AluSp SINE Alu 1 310 -3 314 268 0 0 chr20 16922201 16922272 -55231610 + MIR3 SINE MIR 128 198 -10 679 11 23 0 chr20 16923602 16923690 -55230192 + (TAGA)n Simple_repeat Simple_repeat 2 91 0 272 137 0 59 chr20 16923994 16924045 -55229837 + L2 LINE L2 3265 3312 -1 2314 90 0 0 chr20 16924460 16924750 -55229132 + AluSc SINE Alu 5 294 -15 1936 240 103 65 chr20 16925579 16926694 -55227188 - L2 LINE L2 0 3313 2153 216 255 20 20 chr20 16927401 16927499 -55226383 + (TA)n Simple_repeat Simple_repeat 1 98 0 324 306 0 0 chr20 16927516 16927588 -55226294 + MIR SINE MIR 11 82 -180 423 289 35 0 chr20 16927956 16928070 -55225812 - MIR SINE MIR -25 237 120 370 289 29 10 chr20 16928860 16928964 -55224918 - MER91C DNA MER1_type -34 106 1 624 309 36 32 chr20 16929802 16930054 -55223828 - LTR16C LTR ERVL -3 488 236 264 324 176 14 chr20 16930061 16930122 -55223760 + MER5A DNA MER1_type 9 59 -130 1963 155 19 30 chr20 16930122 16930490 -55223392 + L1PA16 LINE L1 5803 6166 0 264 324 176 14 chr20 16930490 16930576 -55223306 + MER5A DNA MER1_type 59 180 -9 429 306 45 38 chr20 16930585 16930742 -55223140 - LTR16C LTR ERVL -253 238 81 531 289 93 18 chr20 16931130 16931264 -55222618 + MIR SINE MIR 12 171 -91 185 65 32 0 chr20 16931264 16931295 -55222587 + (TAA)n Simple_repeat Simple_repeat 2 33 0 531 289 93 18 chr20 16931295 16931385 -55222497 + MIR SINE MIR 171 253 -9 209 324 81 0 chr20 16931485 16931559 -55222323 - L2 LINE L2 -9 3263 3184 752 236 80 42 chr20 16932518 16932755 -55221127 - MIR SINE MIR -16 246 1 286 292 36 66 chr20 16933968 16934105 -55219777 - L2 LINE L2 -2 3311 3179 386 302 40 7 chr20 16935647 16935862 -55218020 - L1MEc LINE L1 -3758 2457 2241 1281 180 123 11 chr20 16936104 16936365 -55217517 - AluSx SINE Alu -19 293 4 714 278 154 23 chr20 16936413 16937024 -55216858 - L1MEc LINE L1 -4909 1296 606 285 172 0 0 chr20 16938151 16938215 -55215667 + (CA)n Simple_repeat Simple_repeat 1 64 0 1398 100 0 0 chr20 16939311 16939501 -55214381 + L1P4 LINE L1 5554 5743 -425 2523 264 59 24 chr20 16939855 16941404 -55212478 + L1MEc LINE L1 23 1649 -4747 1797 139 0 4 chr20 16941425 16941691 -55212191 + AluSx SINE Alu 34 298 -14 230 284 49 0 chr20 16941700 16941781 -55212101 + L1MEc LINE L1 1635 1719 -4677 528 244 105 6 chr20 16941816 16941988 -55211894 + L1MEc LINE L1 1703 1891 -4505 * 5255 136 38 48 chr20 16941964 16943107 -55210775 + L1MA5 LINE L1 5239 6369 0 7239 226 57 42 chr20 16943111 16943420 -55210462 + L1MEc LINE L1 1850 2153 -4062 2270 102 0 7 chr20 16943420 16943723 -55210159 + AluSg SINE Alu 1 301 -9 7239 226 57 42 chr20 16943723 16943772 -55210110 + L1MEc LINE L1 2153 2200 -4015 2436 74 0 0 chr20 16943772 16944069 -55209813 - AluY SINE Alu -14 297 1 7239 226 57 42 chr20 16944069 16944661 -55209221 + L1MEc LINE L1 2200 2782 -3433 680 225 0 0 chr20 16944661 16944790 -55209092 + FLAM_A SINE Alu 3 131 -2 7239 226 57 42 chr20 16944790 16946546 -55207336 + L1MEc LINE L1 2782 4667 -1548 1759 202 27 25 chr20 16946612 16946978 -55206904 - MLT1A2 LTR MaLR -7 367 1 259 181 28 0 chr20 16948393 16948465 -55205417 + GA-rich Low_complexity Low_complexity 3 76 0 2233 103 6 3 chr20 16948730 16949049 -55204833 - L1PA16 LINE L1 -10 6156 5837 5782 120 10 3 chr20 16949078 16949961 -55203921 - L1PA13 LINE L1 -4 6159 5271 5694 159 14 3 chr20 16949947 16950967 -55202915 - L1PA13 LINE L1 -1133 5013 3983 * 1146 220 116 0 chr20 16950974 16951224 -55202658 + Tigger2 DNA MER2_type 265 543 -2175 274 179 0 36 chr20 16951224 16951271 -55202611 + Alu SINE Alu 236 282 -20 1600 109 4 4 chr20 16951271 16951501 -55202381 - AluSg/x SINE Alu -10 302 73 2227 109 0 7 chr20 16951533 16951835 -55202047 + AluSx SINE Alu 1 300 -12 1145 165 20 10 chr20 16951853 16952053 -55201829 + Tigger2 DNA MER2_type 542 743 -1975 1114 177 74 12 chr20 16952120 16952363 -55201519 + Tigger2 DNA MER2_type 2461 2718 0 2326 88 0 10 chr20 16952401 16952698 -55201184 + AluY SINE Alu 1 294 -17 1529 247 106 46 chr20 16952788 16953692 -55200190 + L1M4c LINE L1 31 1026 -5254 2170 195 19 10 chr20 16953888 16954099 -55199783 - MSTB LTR MaLR -4 422 215 186 43 0 0 chr20 16954099 16954122 -55199760 + (GA)n Simple_repeat Simple_repeat 2 24 0 2170 195 19 10 chr20 16954122 16954326 -55199556 - MSTB LTR MaLR -211 215 3 371 305 86 40 chr20 16954510 16954684 -55199198 + MIR SINE MIR 67 248 -14 225 0 0 0 chr20 16958010 16958035 -55195847 + (TTTA)n Simple_repeat Simple_repeat 4 28 0 2267 80 3 0 chr20 16958038 16958326 -55195556 - AluSp SINE Alu -24 289 1 2348 78 3 0 chr20 16958357 16958652 -55195230 + AluY SINE Alu 5 300 -11 556 287 23 43 chr20 16959327 16959585 -55194297 - MER46C DNA MER2_type 0 338 86 4608 186 47 10 chr20 16959819 16961265 -55192617 + L1MB4 LINE L1 4663 6168 -12 476 138 0 0 chr20 16961290 16961370 -55192512 + L1MB8 LINE L1 6098 6177 -1 812 260 48 8 chr20 16961427 16961677 -55192205 + MIR SINE MIR 3 262 0 801 294 173 18 chr20 16962137 16962467 -55191415 - LTR16A LTR ERVL -56 394 14 892 211 22 11 chr20 16962482 16962667 -55191215 + MER5A DNA MER1_type 2 188 -1 357 256 42 48 chr20 16963502 16963670 -55190212 - MIR SINE MIR -26 236 70 577 316 48 5 chr20 16963691 16963900 -55189982 - MIR SINE MIR -14 248 31 1861 149 3 11 chr20 16963913 16964243 -55189639 - AluJo SINE Alu 0 332 5 262 194 43 97 chr20 16964277 16964370 -55189512 - MER5B DNA MER1_type -89 89 2 23 0 0 0 chr20 16965436 16965459 -55188423 + AT_rich Low_complexity Low_complexity 1 23 0 297 312 71 68 chr20 16968547 16968858 -55185024 - L2 LINE L2 -3 3310 2999 213 39 0 0 chr20 16968876 16968902 -55184980 + (GAAAA)n Simple_repeat Simple_repeat 2 27 0 21 36 0 0 chr20 16969106 16969134 -55184748 + AT_rich Low_complexity Low_complexity 1 28 0 1723 185 3 19 chr20 16969201 16969509 -55184373 - AluJo SINE Alu -8 304 2 26 50 0 0 chr20 16969672 16969712 -55184170 + AT_rich Low_complexity Low_complexity 1 40 0 22 0 0 0 chr20 16969779 16969801 -55184081 + AT_rich Low_complexity Low_complexity 1 22 0 3542 243 75 68 chr20 16971082 16972160 -55181722 + L1MB5 LINE L1 2 1071 -5573 2167 92 32 0 chr20 16972160 16972442 -55181440 - AluY SINE Alu -20 291 1 3542 243 75 68 chr20 16972442 16974048 -55179834 + L1MB5 LINE L1 1071 2664 -3980 2148 116 3 0 chr20 16974048 16974341 -55179541 + AluSc SINE Alu 1 294 -15 3542 243 75 68 chr20 16974341 16975862 -55178020 + L1MB5 LINE L1 2664 4274 -2370 1977 205 16 38 chr20 16975834 16976282 -55177600 + L1MB5 LINE L1 6234 6671 -1 * 603 219 6 61 chr20 16976631 16976795 -55177087 - MER5B DNA MER1_type -22 156 2 2565 39 13 3 chr20 16976866 16977174 -55176708 - AluY SINE Alu 0 311 1 397 287 93 13 chr20 16977285 16977435 -55176447 + MIR SINE MIR 2 163 -99 263 336 48 16 chr20 16977486 16977611 -55176271 - MIR SINE MIR -106 156 28 995 154 67 5 chr20 16977695 16977890 -55175992 - MER63 DNA MER1_type -14 1047 841 530 270 132 0 chr20 16978356 16978515 -55175367 + MIR SINE MIR 58 237 -25 232 290 97 0 chr20 16979507 16979600 -55174282 - MER117 DNA MER1_type -72 125 24 188 311 16 0 chr20 16979828 16979889 -55173993 - MIR SINE MIR 0 262 201 4605 127 19 37 chr20 16980319 16980841 -55173041 - L1MA8 LINE L1 -17 6274 5771 1714 167 39 0 chr20 16980841 16981122 -55172760 - AluJb SINE Alu -20 292 1 4605 127 19 37 chr20 16981122 16981428 -55172454 - L1MA8 LINE L1 -520 5771 5461 1872 161 0 3 chr20 16981495 16981808 -55172074 - AluJo SINE Alu 0 312 1 501 236 103 56 chr20 16981872 16981963 -55171919 + MIR SINE MIR 46 131 -131 2345 83 0 3 chr20 16981963 16982263 -55171619 + AluSc SINE Alu 7 305 -4 501 236 103 56 chr20 16982263 16982366 -55171516 + MIR SINE MIR 131 249 -13 1554 266 80 35 chr20 16983501 16983908 -55169974 + MLT1G1 LTR MaLR 3 443 -152 2348 113 0 0 chr20 16983908 16984218 -55169664 + AluSx SINE Alu 1 310 -2 1554 266 80 35 chr20 16984218 16984373 -55169509 + MLT1G1 LTR MaLR 443 590 -5 594 348 8 25 chr20 16984417 16984661 -55169221 - MIR SINE MIR -16 246 7 260 148 131 0 chr20 16984978 16985039 -55168843 - L1ME4a LINE L1 -91 6030 5962 3564 108 58 45 chr20 16985485 16986108 -55167774 + L1PA16 LINE L1 5529 6159 -7 367 243 0 0 chr20 16986130 16986200 -55167682 - Charlie1 DNA MER1_type -2646 115 46 277 302 9 20 chr20 16986364 16986581 -55167301 + L1ME LINE L1 5187 5399 -747 373 264 167 56 chr20 16986715 16986931 -55166951 + MLT1L LTR MaLR 5 244 -371 515 261 22 22 chr20 16987048 16987186 -55166696 + MLT1L LTR MaLR 474 611 -4 406 264 35 14 chr20 16987195 16987339 -55166543 + L1ME LINE L1 5572 5718 -452 546 280 36 0 chr20 16987514 16987682 -55166200 + MLT1J LTR MaLR 334 507 -4 301 266 31 8 chr20 16988137 16988265 -55165617 + L1ME LINE L1 5555 5685 -436 782 78 0 0 chr20 16988289 16988391 -55165491 - U6 snRNA snRNA -2 105 4 8920 144 17 20 chr20 16988507 16990664 -55163218 + L1MA2 LINE L1 3675 5828 -476 1583 75 5 5 chr20 16990664 16990863 -55163019 + AluSx SINE Alu 1 199 -113 1491 135 0 17 chr20 16990900 16991137 -55162745 + L1MA2 LINE L1 5814 6046 -258 36 23 0 0 chr20 16991137 16991180 -55162702 + AT_rich Low_complexity Low_complexity 1 43 0 1356 126 90 12 chr20 16991199 16991454 -55162428 + L1MA2 LINE L1 6030 6304 0 1726 183 0 0 chr20 16991617 16991896 -55161986 - AluJb SINE Alu -2 310 32 2230 110 3 25 chr20 16992414 16992733 -55161149 - AluSx SINE Alu 0 312 1 2027 89 59 36 chr20 16994589 16994893 -55158989 - AluY SINE Alu 0 311 1 261 138 5 3 chr20 16994983 16995201 -55158681 + AluSx SINE Alu 1 294 -7 180 111 0 0 chr20 16995430 16995457 -55158425 + (TAA)n Simple_repeat Simple_repeat 2 28 0 255 322 44 11 chr20 16997301 16997391 -55156491 - MIR SINE MIR -95 167 75 799 294 69 71 chr20 16998452 16999014 -55154868 + MLT1K LTR MaLR 26 586 -2 2231 106 3 3 chr20 16999052 16999353 -55154529 - AluSq SINE Alu -8 305 5 219 250 19 0 chr20 16999469 16999521 -55154361 - L3 LINE CR1 0 1577 1525 238 82 61 0 chr20 16999563 16999612 -55154270 + (TGAA)n Simple_repeat Simple_repeat 4 55 0 263 244 85 56 chr20 17000314 17000482 -55153400 - MIR SINE MIR 0 262 2 28 0 0 0 chr20 17001270 17001298 -55152584 + AT_rich Low_complexity Low_complexity 1 28 0 22 56 0 0 chr20 17002090 17002126 -55151756 + AT_rich Low_complexity Low_complexity 1 36 0 1733 93 141 0 chr20 17002345 17002593 -55151289 - AluSp SINE Alu -30 283 1 31 68 0 0 chr20 17004341 17004400 -55149482 + AT_rich Low_complexity Low_complexity 1 59 0 203 241 17 35 chr20 17006959 17007017 -55146865 + L2 LINE L2 3248 3304 -9 22 0 0 0 chr20 17015619 17015641 -55138241 + AT_rich Low_complexity Low_complexity 1 22 0 3826 194 83 14 chr20 17016936 17017741 -55136141 + MER21B LTR ERV1 1 861 -2 398 255 129 0 chr20 17017743 17017883 -55135999 + MIR SINE MIR 32 191 -57 234 0 0 0 chr20 17018511 17018537 -55135345 + (TA)n Simple_repeat Simple_repeat 2 27 0 2304 106 0 0 chr20 17019337 17019630 -55134252 - AluSx SINE Alu -19 293 1 207 220 70 180 chr20 17019885 17020085 -55133797 - MER5B DNA MER1_type 0 178 1 23 0 0 0 chr20 17020277 17020300 -55133582 + AT_rich Low_complexity Low_complexity 1 23 0 217 361 138 4 chr20 17020309 17020569 -55133313 - L2 LINE L2 -649 2665 2371 321 215 127 0 chr20 17020609 17020688 -55133194 - MER94 DNA DNA -32 102 14 215 312 137 39 chr20 17020812 17021200 -55132682 - L2 LINE L2 -1115 2199 1774 452 271 66 13 chr20 17022801 17022952 -55130930 - MIR SINE MIR -8 254 96 326 332 152 41 chr20 17022954 17023076 -55130806 - L2 LINE L2 0 3313 3206 2216 78 17 17 chr20 17023076 17023371 -55130511 - AluSc SINE Alu -10 299 5 326 332 152 41 chr20 17023371 17023688 -55130194 - L2 LINE L2 -107 3206 2825 189 250 24 71 chr20 17023837 17023921 -55129961 - L2 LINE L2 -598 2716 2637 1628 114 13 0 chr20 17024028 17024255 -55129627 + MER30 DNA MER1_type 1 230 0 505 280 32 59 chr20 17025115 17025301 -55128581 + L2 LINE L2 3133 3313 0 347 299 69 21 chr20 17025444 17025591 -55128291 - MIR SINE MIR -59 149 3 456 306 102 11 chr20 17025689 17025875 -55128007 + MIR SINE MIR 11 213 -49 2148 96 3 0 chr20 17025916 17026234 -55127648 - AluSp SINE Alu 0 319 1 454 314 124 38 chr20 17027814 17028024 -55125858 + MIR SINE MIR 4 231 -31 326 335 12 4 chr20 17028054 17028235 -55125647 + MIR SINE MIR 2 249 -13 239 227 30 82 chr20 17028466 17028575 -55125307 - MER5A DNA MER1_type -75 114 1 2176 107 3 0 chr20 17028895 17029193 -55124689 + AluSx SINE Alu 1 299 -13 6911 115 69 9 chr20 17029203 17030364 -55123518 - Tigger3b DNA MER2_type 0 1231 1 21 71 0 0 chr20 17031523 17031565 -55122317 + AT_rich Low_complexity Low_complexity 1 42 0 315 0 0 0 chr20 17033665 17033700 -55120182 + (TG)n Simple_repeat Simple_repeat 2 36 0 511 313 106 8 chr20 17034172 17034418 -55119464 + L3 LINE CR1 422 691 -886 248 277 201 38 chr20 17034431 17034799 -55119083 - L2 LINE L2 -1257 2057 1630 585 284 53 62 chr20 17035345 17035582 -55118300 - L2 LINE L2 -99 3214 2979 775 188 23 23 chr20 17035582 17035758 -55118124 - MER5B DNA MER1_type -1 177 2 585 284 53 62 chr20 17035758 17035840 -55118042 - L2 LINE L2 -334 2979 2898 202 135 27 0 chr20 17035929 17035966 -55117916 + A-rich Low_complexity Low_complexity 2 39 0 289 308 9 19 chr20 17036197 17036304 -55117578 + L3 LINE CR1 900 1005 -572 424 296 70 38 chr20 17036374 17036560 -55117322 + L3 LINE CR1 1001 1192 -385 2089 113 13 3 chr20 17037761 17038062 -55115820 + AluSg SINE Alu 1 304 -6 325 202 214 24 chr20 17038249 17038333 -55115549 + MLT1E2 LTR MaLR 1 100 -554 * 1821 190 110 3 chr20 17038319 17038692 -55115190 + MLT1E2 LTR MaLR 213 625 -1 767 292 19 4 chr20 17039491 17039748 -55114134 + MIR SINE MIR 2 262 0 189 74 0 0 chr20 17040228 17040255 -55113627 + (CAA)n Simple_repeat Simple_repeat 2 28 0 379 293 106 0 chr20 17040362 17040485 -55113397 + MIR SINE MIR 107 242 -20 337 93 0 0 chr20 17041062 17041105 -55112777 - Tigger1 DNA MER2_type 0 2418 2376 1135 98 0 6 chr20 17041108 17041271 -55112611 - Tigger1 DNA MER2_type -467 1951 1790 * 14321 137 30 9 chr20 17041269 17042126 -55111756 - Tigger1 DNA MER2_type -46 2372 1534 2434 90 0 0 chr20 17042126 17042427 -55111455 - AluSq SINE Alu -12 301 1 14321 137 30 9 chr20 17042427 17043889 -55109993 - Tigger1 DNA MER2_type -884 1534 5 1374 251 26 13 chr20 17044110 17044501 -55109381 - L1ME3A LINE L1 -219 5951 5556 207 306 28 0 chr20 17045000 17045072 -55108810 + L2 LINE L2 3240 3313 0 428 220 120 13 chr20 17045575 17045725 -55108157 + L1MC5 LINE L1 7701 7866 -95 262 267 0 0 chr20 17046447 17046507 -55107375 + (CA)n Simple_repeat Simple_repeat 2 61 0 1236 272 109 28 chr20 17047009 17047554 -55106328 + L2 LINE L2 2730 3311 -2 356 258 140 0 chr20 17047658 17047751 -55106131 + L2 LINE L2 3158 3263 -9 201 50 0 125 chr20 17047759 17047778 -55106104 + (TGAA)n Simple_repeat Simple_repeat 1 15 -20 2217 99 0 0 chr20 17047778 17048080 -55105802 + AluSq SINE Alu 1 302 0 201 50 0 125 chr20 17048080 17048099 -55105783 + (TGAA)n Simple_repeat Simple_repeat 15 35 0 1365 228 87 65 chr20 17048196 17048238 -55105644 + LTR16A1 LTR ERVL 1 41 -416 946 196 41 45 chr20 17048238 17048458 -55105424 - MER20 DNA MER1_type 0 219 1 1365 228 87 65 chr20 17048458 17048862 -55105020 + LTR16A1 LTR ERVL 41 457 0 2308 100 3 0 chr20 17049904 17050205 -55103677 + AluSp SINE Alu 1 302 -11 566 215 22 7 chr20 17050428 17050563 -55103319 - L1PA14 LINE L1 -2 6159 6023 1790 165 3 10 chr20 17050872 17051175 -55102707 + AluJo SINE Alu 1 301 -11 595 224 36 42 chr20 17052247 17052412 -55101470 - MLT1J LTR MaLR -24 487 324 566 239 13 65 chr20 17052407 17052562 -55101320 - MLT1J LTR MaLR -358 153 7 * 2407 236 33 25 chr20 17052605 17053174 -55100708 + MLT1E LTR MaLR 15 588 -5 369 43 0 0 chr20 17053282 17053329 -55100553 + (CAT)n Simple_repeat Simple_repeat 2 48 0 1868 136 51 26 chr20 17055242 17055594 -55098288 + MER46B DNA MER2_type 1 236 0 1001 113 0 0 chr20 17056913 17057046 -55096836 + AluSq/x SINE Alu 1 133 -180 561 263 45 0 chr20 17057619 17057752 -55096130 + MLT1H1 LTR MaLR 17 155 -400 2137 156 82 10 chr20 17057763 17058154 -55095728 + MSTA LTR MaLR 10 428 0 384 246 95 77 chr20 17058161 17058383 -55095499 + MLT1G1 LTR MaLR 156 446 -149 1345 215 37 6 chr20 17058395 17058749 -55095133 + Charlie1 DNA MER1_type 2233 2597 -164 2339 94 3 0 chr20 17058750 17059058 -55094824 - AluSg SINE Alu -1 309 1 329 111 0 0 chr20 17059074 17059128 -55094754 - L1MB7 LINE L1 -19 6165 6112 2542 161 32 0 chr20 17059164 17059629 -55094253 - L1MB7 LINE L1 -58 6126 5647 308 236 149 0 chr20 17059634 17059782 -55094100 + Charlie1 DNA MER1_type 2592 2761 0 316 305 19 19 chr20 17061039 17061144 -55092738 + MIR SINE MIR 36 140 -122 21 36 0 0 chr20 17061848 17061876 -55092006 + AT_rich Low_complexity Low_complexity 1 28 0 192 40 0 0 chr20 17062982 17063007 -55090875 + (TC)n Simple_repeat Simple_repeat 2 26 0 224 196 18 18 chr20 17063018 17063074 -55090808 + L2 LINE L2 3258 3313 0 2091 91 24 7 chr20 17063253 17063540 -55090342 - AluSc SINE Alu -12 297 6 596 187 86 36 chr20 17063540 17063679 -55090203 - AluSg SINE Alu -164 146 1 205 297 103 122 chr20 17063742 17064062 -55089820 + L3 LINE CR1 848 1161 -416 203 59 0 29 chr20 17064062 17064096 -55089786 + (TTTTA)n Simple_repeat Simple_repeat 1 33 0 41779 35 5 2 chr20 17064096 17069920 -55083962 - L1PA3 LINE L1 -24 6131 293 634 37 0 12 chr20 17069920 17070001 -55083881 - L1PA3 LINE L1 -6065 81 2 233 248 38 48 chr20 17070001 17070106 -55083776 + L3 LINE CR1 1153 1256 -321 2066 130 3 0 chr20 17070109 17070401 -55083481 - AluSc SINE Alu -14 295 3 202 333 0 0 chr20 17070455 17070515 -55083367 + (TA)n Simple_repeat Simple_repeat 1 60 0 21 0 0 0 chr20 17070581 17070602 -55083280 + AT_rich Low_complexity Low_complexity 1 21 0 252 234 22 66 chr20 17072134 17072271 -55081611 + L1MC5 LINE L1 7261 7391 -570 358 272 121 39 chr20 17072352 17072690 -55081192 + L1MC5 LINE L1 7552 7917 -44 240 162 0 0 chr20 17073118 17073155 -55080727 - MER94 DNA DNA -97 37 1 180 125 0 0 chr20 17073922 17073954 -55079928 + (CATATA)n Simple_repeat Simple_repeat 5 36 0 421 311 20 13 chr20 17074376 17074527 -55079355 - MIR3 SINE MIR -2 206 55 2498 67 0 0 chr20 17074637 17074936 -55078946 + AluY SINE Alu 1 299 -12 500 0 17 0 chr20 17076680 17076740 -55077142 + (TG)n Simple_repeat Simple_repeat 2 62 0 1623 164 0 38 chr20 17076742 17077034 -55076848 - AluJb SINE Alu -31 281 1 575 254 113 19 chr20 17077319 17077532 -55076350 + LTR33A LTR ERVL 289 521 -2 390 328 185 28 chr20 17077537 17078452 -55075430 + L2 LINE L2 1472 2529 -785 402 324 54 31 chr20 17078694 17078916 -55074966 - MLT1K LTR MaLR -160 428 202 560 286 122 14 chr20 17079876 17080089 -55073793 - MIR SINE MIR -25 237 2 864 200 0 12 chr20 17080111 17080271 -55073611 + FRAM SINE Alu 1 158 -18 455 329 57 0 chr20 17080997 17081137 -55072745 + L2 LINE L2 3118 3265 -7 21 36 0 0 chr20 17081330 17081358 -55072524 + AT_rich Low_complexity Low_complexity 1 28 0 2062 114 0 0 chr20 17081492 17081764 -55072118 + AluSg SINE Alu 21 292 -18 5792 103 32 1 chr20 17081790 17082972 -55070910 + L1PB1 LINE L1 4941 6151 0 21 0 0 0 chr20 17083025 17083046 -55070836 + AT_rich Low_complexity Low_complexity 1 21 0 667 298 110 56 chr20 17084171 17084983 -55068899 + L1MEd LINE L1 595 1479 -4831 378 0 0 0 chr20 17084987 17085029 -55068853 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 3459 33 0 5 chr20 17085029 17085450 -55068432 - L1PA4 LINE L1 -16 6139 5721 799 21 0 0 chr20 17085452 17085547 -55068335 - L1P LINE L1 -3920 2226 2132 * 3534 30 12 0 chr20 17085542 17085968 -55067914 + L1P LINE L1 1718 2148 -3998 25 0 0 0 chr20 17086217 17086242 -55067640 + AT_rich Low_complexity Low_complexity 1 25 0 665 247 25 0 chr20 17088044 17088202 -55065680 - L2 LINE L2 0 3313 3152 239 133 22 0 chr20 17089930 17089975 -55063907 + (TTA)n Simple_repeat Simple_repeat 1 46 0 198 0 0 0 chr20 17091562 17091584 -55062298 + (A)n Simple_repeat Simple_repeat 1 22 0 5452 110 22 26 chr20 17091912 17092108 -55061774 - Tigger4(Zombi) DNA MER2_type -2 2729 2534 2093 103 11 0 chr20 17092108 17092409 -55061473 - AluSx SINE Alu 0 304 1 5452 110 22 26 chr20 17092409 17093069 -55060813 - Tigger4(Zombi) DNA MER2_type -197 2534 1875 628 146 0 0 chr20 17093073 17093162 -55060720 - Tigger4(Zombi) DNA MER2_type -2642 89 1 27 0 0 0 chr20 17093539 17093566 -55060316 + AT_rich Low_complexity Low_complexity 1 27 0 501 277 25 12 chr20 17095122 17095305 -55058577 + MIR SINE MIR 9 190 -63 2467 67 3 0 chr20 17095332 17095630 -55058252 - AluY SINE Alu -12 299 1 543 280 64 24 chr20 17096428 17096678 -55057204 + MIR SINE MIR 2 261 -1 21 36 0 0 chr20 17098138 17098166 -55055716 + AT_rich Low_complexity Low_complexity 1 28 0 233 345 18 67 chr20 17098928 17099093 -55054789 + L2 LINE L2 2935 3091 -181 233 143 0 20 chr20 17099142 17099191 -55054691 + (TA)n Simple_repeat Simple_repeat 1 48 0 2105 101 47 0 chr20 17099586 17099864 -55054018 - AluSg SINE Alu -19 291 1 6404 180 22 16 chr20 17099866 17101658 -55052224 - L1PA15 LINE L1 -13 6152 4333 2455 94 0 0 chr20 17101658 17101966 -55051916 - AluSg SINE Alu -2 308 1 6404 180 22 16 chr20 17101966 17102528 -55051354 - L1PA15 LINE L1 -1832 4333 3776 5318 37 0 3 chr20 17102528 17103171 -55050711 + L1PA4 LINE L1 5515 6155 0 478 271 51 86 chr20 17103175 17103430 -55050452 + L1MEd LINE L1 988 1233 -4886 379 269 38 68 chr20 17103475 17103739 -55050143 + HAL1 LINE L1 1396 1651 -856 23 0 0 0 chr20 17104087 17104110 -55049772 + AT_rich Low_complexity Low_complexity 1 23 0 507 266 29 7 chr20 17105215 17105354 -55048528 + MIR SINE MIR 6 147 -115 2451 144 40 12 chr20 17106492 17106986 -55046896 - L1MC2 LINE L1 -20 6324 5817 2480 63 0 16 chr20 17106986 17107302 -55046580 - AluY SINE Alu 0 311 1 13208 134 33 38 chr20 17107331 17108480 -55045402 + Tigger1 DNA MER2_type 1 1154 -1264 7537 27 1 2 chr20 17108480 17109574 -55044308 + L1PA4 LINE L1 5060 6155 0 13208 134 33 38 chr20 17109574 17110854 -55043028 + Tigger1 DNA MER2_type 1154 2418 0 2674 181 45 8 chr20 17110854 17111624 -55042258 - L1MC2 LINE L1 -543 5801 5007 1767 140 68 14 chr20 17111695 17111987 -55041895 - AluSx SINE Alu -4 308 1 255 248 46 45 chr20 17112071 17112182 -55041700 - L1ME LINE L1 -296 5825 5713 1464 78 11 0 chr20 17112189 17112380 -55041502 + AluY SINE Alu 112 304 -7 625 197 34 77 chr20 17112454 17112518 -55041364 - L1MC4 LINE L1 -75 7967 7902 198 0 0 0 chr20 17112518 17112540 -55041342 + (TC)n Simple_repeat Simple_repeat 2 23 0 625 197 34 77 chr20 17112540 17112709 -55041173 - L1MC4 LINE L1 -140 7902 7744 392 81 0 0 chr20 17112709 17112771 -55041111 + L1MC2 LINE L1 6282 6343 -1 429 239 136 19 chr20 17112778 17112933 -55040949 + L1MC4 LINE L1 7572 7744 -298 4240 116 106 98 chr20 17113016 17114385 -55039497 - pTR5 LTR ERV1 -1 2437 743 2095 163 64 8 chr20 17116501 17116893 -55036989 + MLT2D LTR ERVL 1 414 0 2333 82 27 0 chr20 17116915 17117209 -55036673 + AluSg SINE Alu 1 302 -8 1396 147 9 0 chr20 17117443 17117654 -55036228 - 7SLRNA srpRNA srpRNA -86 234 22 267 31 0 0 chr20 17117867 17117899 -55035983 + (T)n Simple_repeat Simple_repeat 1 32 0 4717 159 23 17 chr20 17118073 17119316 -55034566 - L1PB4 LINE L1 -7 6149 4905 230 282 233 0 chr20 17119381 17119484 -55034398 - MIR SINE MIR -110 152 26 9372 196 65 9 chr20 17119672 17125331 -55028551 + L1PB1 LINE L1 6 6498 -369 396 0 0 0 chr20 17125331 17125375 -55028507 + (TG)n Simple_repeat Simple_repeat 2 45 0 362 179 34 67 chr20 17125427 17125606 -55028276 + (TATAA)n Simple_repeat Simple_repeat 5 177 0 182 167 28 28 chr20 17125655 17125727 -55028155 + (TA)n Simple_repeat Simple_repeat 2 73 0 2347 138 0 0 chr20 17125736 17126106 -55027776 + L1PB1 LINE L1 6498 6867 0 373 274 0 102 chr20 17126269 17126446 -55027436 + L1ME LINE L1 59 217 -5853 22 35 0 0 chr20 17126947 17126976 -55026906 + AT_rich Low_complexity Low_complexity 1 29 0 225 0 0 0 chr20 17127326 17127351 -55026531 + (T)n Simple_repeat Simple_repeat 1 25 0 241 319 157 19 chr20 17127907 17128117 -55025765 - MIR SINE MIR -10 252 14 701 238 52 75 chr20 17128586 17128713 -55025169 - MER46C DNA MER2_type 0 338 210 994 266 92 56 chr20 17128713 17129214 -55024668 - LTR33 LTR ERVL 0 521 3 701 238 52 75 chr20 17129214 17129393 -55024489 - MER46C DNA MER2_type -128 210 39 515 285 58 0 chr20 17129401 17129538 -55024344 - MIR SINE MIR -110 152 8 856 237 140 20 chr20 17130849 17131207 -55022675 + MLT1J1 LTR MaLR 44 444 -2 2200 73 28 17 chr20 17133313 17133601 -55020281 + AluSc SINE Alu 1 291 -18 241 259 138 26 chr20 17133931 17134047 -55019835 - L3 LINE CR1 -803 774 646 202 364 0 0 chr20 17134213 17134279 -55019603 + L2 LINE L2 3241 3306 -7 642 281 0 0 chr20 17134307 17134446 -55019436 - MER5A DNA MER1_type -3 186 48 847 218 99 15 chr20 17134467 17134669 -55019213 - MER20 DNA MER1_type 0 219 1 478 343 34 5 chr20 17134684 17134891 -55018991 + L3 LINE CR1 369 581 -996 225 188 0 16 chr20 17134987 17135051 -55018831 + LTR28 LTR ERV1 1 63 -957 2341 155 8 5 chr20 17135068 17135454 -55018428 + MER61D LTR ERV1 115 501 0 238 367 17 8 chr20 17135454 17135570 -55018312 + MER117 DNA MER1_type 49 165 -32 5566 222 170 9 chr20 17135851 17137630 -55016252 + L1M2 LINE L1 1 2065 -4784 1947 126 8 0 chr20 17137651 17137914 -55015968 - AluSq SINE Alu -16 297 33 21 71 0 0 chr20 17138745 17138787 -55015095 + AT_rich Low_complexity Low_complexity 1 42 0 2239 100 3 0 chr20 17138860 17139150 -55014732 - AluSg1 SINE Alu -15 294 4 311 292 74 21 chr20 17139898 17140141 -55013741 + L1ME LINE L1 5409 5664 -457 3033 68 9 20 chr20 17140160 17140598 -55013284 - L1PA13 LINE L1 0 6163 5731 546 289 48 24 chr20 17140817 17140983 -55012899 + MIR SINE MIR 65 234 -28 236 151 0 38 chr20 17141670 17141723 -55012159 + GA-rich Low_complexity Low_complexity 3 53 0 249 382 0 0 chr20 17141943 17142032 -55011850 + GA-rich Low_complexity Low_complexity 6 94 0 378 139 35 0 chr20 17142491 17142577 -55011305 + CT-rich Low_complexity Low_complexity 1 89 0 2281 97 3 0 chr20 17142932 17143222 -55010660 - AluSx SINE Alu -16 296 6 255 278 28 0 chr20 17144088 17144160 -55009722 + MLT1K LTR MaLR 513 586 -2 3901 110 52 54 chr20 17144527 17145283 -55008599 - LTR1 LTR ERV1 0 785 32 795 279 133 34 chr20 17146829 17147303 -55006579 + LTR33 LTR ERVL 1 521 0 362 286 32 42 chr20 17147696 17147885 -55005997 + MLT1K LTR MaLR 394 580 -8 198 0 0 0 chr20 17148710 17148732 -55005150 + (CCCCCT)n Simple_repeat Simple_repeat 2 23 0 970 231 160 16 chr20 17148739 17149233 -55004649 + L2 LINE L2 2677 3236 -77 2553 55 13 0 chr20 17149706 17150013 -55003869 + AluY SINE Alu 1 311 0 234 0 0 0 chr20 17150013 17150039 -55003843 + (TA)n Simple_repeat Simple_repeat 2 27 0 653 326 27 5 chr20 17150454 17150641 -55003241 - MIR3 SINE MIR 0 208 18 441 333 56 11 chr20 17152413 17152593 -55001289 - MER5A DNA MER1_type 0 189 2 207 100 0 0 chr20 17153551 17153581 -55000301 + (T)n Simple_repeat Simple_repeat 1 30 0 5092 132 16 10 chr20 17153592 17154424 -54999458 - L1PA16 LINE L1 -4 6162 5322 661 339 57 0 chr20 17154834 17155061 -54998821 - MIR SINE MIR -18 244 5 29 28 0 0 chr20 17155070 17155106 -54998776 + AT_rich Low_complexity Low_complexity 1 36 0 223 302 32 0 chr20 17155172 17155235 -54998647 + L2 LINE L2 3245 3309 -4 321 254 123 66 chr20 17155631 17155753 -54998129 - L2 LINE L2 -29 3284 3156 6293 130 14 13 chr20 17155759 17157650 -54996232 + L1PA12 LINE L1 4226 6117 -51 342 48 0 0 chr20 17157653 17157695 -54996187 - L1PA13 LINE L1 -49 6114 6073 188 335 156 22 chr20 17157770 17157949 -54995933 - L2 LINE L2 -223 3090 2888 4185 180 30 28 chr20 17158033 17159238 -54994644 + L1MB7 LINE L1 4964 6165 -19 1888 151 3 10 chr20 17159345 17159644 -54994238 + AluJo SINE Alu 1 297 -15 24 53 0 0 chr20 17159812 17159850 -54994032 + AT_rich Low_complexity Low_complexity 1 38 0 23 54 0 0 chr20 17160026 17160063 -54993819 + AT_rich Low_complexity Low_complexity 1 37 0 1163 161 31 0 chr20 17160580 17160803 -54993079 + L1MB3 LINE L1 5947 6176 -7 196 331 132 19 chr20 17161187 17161444 -54992438 + L3 LINE CR1 1109 1394 -183 485 286 136 12 chr20 17161608 17161856 -54992026 + MLT1H1 LTR MaLR 18 263 -292 207 0 0 0 chr20 17161963 17161986 -54991896 + (A)n Simple_repeat Simple_repeat 1 23 0 846 274 50 33 chr20 17161991 17162353 -54991529 - L1MC4a LINE L1 -1625 6183 5816 707 192 0 0 chr20 17162365 17162511 -54991371 - L1MA6 LINE L1 -5 6295 6150 632 321 47 46 chr20 17162584 17163097 -54990785 - L1MC4a LINE L1 -871 5275 4759 2195 95 3 47 chr20 17163097 17163414 -54990468 + AluSp SINE Alu 1 303 -10 632 321 47 46 chr20 17163414 17163770 -54990112 - L1MC4a LINE L1 -1387 4759 4405 338 224 0 0 chr20 17163785 17163852 -54990030 + MLT1H1 LTR MaLR 489 555 0 399 258 0 0 chr20 17165006 17165095 -54988787 + L1MCa LINE L1 517 605 -5821 660 276 33 6 chr20 17165102 17165283 -54988599 + L1MCa LINE L1 568 753 -5673 889 251 0 5 chr20 17165286 17165485 -54988397 + L1MCb LINE L1 620 817 -5228 15864 149 72 12 chr20 17165497 17168108 -54985774 + L1PBa LINE L1 3 2457 -4405 2289 113 0 0 chr20 17168108 17168409 -54985473 + AluSx SINE Alu 1 301 -11 15864 149 72 12 chr20 17168409 17170493 -54983389 + L1PBa LINE L1 2457 4993 -1869 2162 111 0 0 chr20 17170521 17170800 -54983082 + AluSg SINE Alu 1 279 -31 230 239 15 0 chr20 17170832 17170899 -54982983 + L1MCb LINE L1 1963 2030 -4534 465 176 386 0 chr20 17170904 17171057 -54982825 + L1MCb LINE L1 2097 2308 -4256 2234 89 4 0 chr20 17171109 17171389 -54982493 + AluSp SINE Alu 1 281 -32 2430 178 4 11 chr20 17171501 17171973 -54981909 - L1 LINE L1 -2153 3993 3525 1652 141 35 81 chr20 17171977 17172347 -54981535 + L1MC2 LINE L1 5991 6343 -1 216 175 0 0 chr20 17172440 17172480 -54981402 + (TTCA)n Simple_repeat Simple_repeat 1 40 0 2231 98 3 20 chr20 17173024 17173329 -54980553 + AluSq SINE Alu 1 300 -13 279 373 15 20 chr20 17174083 17174287 -54979595 - L2 LINE L2 -962 2352 2150 272 27 27 0 chr20 17174355 17174392 -54979490 + (CA)n Simple_repeat Simple_repeat 2 39 0 24 32 0 0 chr20 17174524 17174555 -54979327 + AT_rich Low_complexity Low_complexity 1 31 0 15283 165 38 18 chr20 17175147 17178731 -54975151 + L1MA4A LINE L1 10 3520 -3485 2389 168 6 56 chr20 17178731 17178820 -54975062 + L1PB4 LINE L1 5664 5756 -400 1947 104 3 63 chr20 17178820 17179137 -54974745 + AluSc SINE Alu 1 298 -11 2389 168 6 56 chr20 17179137 17179227 -54974655 + L1PB4 LINE L1 5756 5849 -307 2293 107 3 3 chr20 17179227 17179536 -54974346 + AluSc SINE Alu 1 309 0 2389 168 6 56 chr20 17179536 17179872 -54974010 + L1PB4 LINE L1 5849 6154 -2 15283 165 38 18 chr20 17179872 17181444 -54972438 + L1MA4A LINE L1 3520 5059 -1946 2298 124 0 3 chr20 17181444 17181758 -54972124 - AluSq SINE Alu 0 313 1 15283 165 38 18 chr20 17181758 17183446 -54970436 + L1MA4A LINE L1 5059 6994 -11 1834 168 34 0 chr20 17184536 17184833 -54969049 - AluJb SINE Alu -5 307 1 21 0 0 0 chr20 17184864 17184885 -54968997 + AT_rich Low_complexity Low_complexity 1 21 0 266 243 18 27 chr20 17185462 17185573 -54968309 + (TA)n Simple_repeat Simple_repeat 2 111 0 261 385 39 10 chr20 17185715 17185819 -54968063 - L2 LINE L2 -51 3221 3115 2279 60 3 81 chr20 17186001 17186333 -54967549 + AluY SINE Alu 1 306 -5 2318 107 0 0 chr20 17187986 17188284 -54965598 + AluSx SINE Alu 1 298 -14 21 0 0 0 chr20 17188477 17188498 -54965384 + AT_rich Low_complexity Low_complexity 1 21 0 2613 58 0 0 chr20 17188592 17188901 -54964981 + AluY SINE Alu 1 309 -2 296 364 8 0 chr20 17190556 17190677 -54963205 + GA-rich Low_complexity Low_complexity 1 122 0 4196 132 27 38 chr20 17190931 17191666 -54962216 + L1PA16 LINE L1 5361 6087 -79 208 299 103 10 chr20 17193120 17193217 -54960665 + L2 LINE L2 3140 3245 -27 487 213 118 29 chr20 17193237 17193373 -54960509 - MIR SINE MIR -1 261 114 567 312 70 26 chr20 17193383 17193630 -54960252 + MIR SINE MIR 1 255 -7 221 271 213 16 chr20 17193734 17193856 -54960026 + MER5A DNA MER1_type 44 189 0 2447 43 13 7 chr20 17194369 17194672 -54959210 - AluY SINE Alu -6 305 1 233 354 90 42 chr20 17196091 17196235 -54957647 + L2 LINE L2 3121 3271 -1 22 0 0 0 chr20 17196827 17196849 -54957033 + AT_rich Low_complexity Low_complexity 1 22 0 24 53 0 0 chr20 17197919 17197957 -54955925 + AT_rich Low_complexity Low_complexity 1 38 0 542 313 17 6 chr20 17198615 17198791 -54955091 + MIR SINE MIR 61 238 -24 545 266 117 33 chr20 17198878 17198938 -54954944 - MIR SINE MIR -16 246 192 2279 109 3 0 chr20 17198938 17199249 -54954633 - AluSq SINE Alu -1 312 1 545 266 117 33 chr20 17199249 17199402 -54954480 - MIR SINE MIR -70 192 15 220 281 151 68 chr20 17199408 17199554 -54954328 - MIR3 SINE MIR -36 172 15 1700 158 51 34 chr20 17200603 17200958 -54952924 - MER46B DNA MER2_type 0 236 1 454 241 167 31 chr20 17201257 17201419 -54952463 + MIR SINE MIR 5 188 -74 567 114 0 11 chr20 17201423 17201511 -54952371 + AluS SINE Alu 1 87 -225 4948 176 62 23 chr20 17201764 17201906 -54951976 - L1MA9 LINE L1 0 6312 6177 387 0 0 0 chr20 17201906 17201949 -54951933 + (TG)n Simple_repeat Simple_repeat 1 43 0 4948 176 62 23 chr20 17201949 17203226 -54950656 - L1MA9 LINE L1 -135 6177 4847 554 200 0 0 chr20 17203221 17203331 -54950551 + L1M1 LINE L1 2952 3061 -4504 * 1725 169 7 13 chr20 17203331 17203633 -54950249 + Tigger2 DNA MER2_type 2419 2718 0 553 187 37 0 chr20 17203642 17203749 -54950133 - MER33 DNA MER1_type -197 127 17 788 159 159 0 chr20 17204024 17204187 -54949695 - MER5A DNA MER1_type 0 189 1 362 312 37 0 chr20 17204212 17204321 -54949561 - MIR SINE MIR -111 151 39 394 125 0 0 chr20 17204334 17204390 -54949492 - AluS SINE Alu -243 57 2 260 232 0 0 chr20 17204406 17204488 -54949394 - L1M4 LINE L1 -1088 5058 4977 1870 219 28 101 chr20 17204522 17205023 -54948859 - L1M4 LINE L1 -1799 4347 3912 1479 181 14 43 chr20 17205023 17205299 -54948583 - AluJo SINE Alu -16 296 29 1870 219 28 101 chr20 17205299 17205508 -54948374 - L1M4 LINE L1 -2234 3912 3689 2324 84 7 0 chr20 17205890 17206188 -54947694 - AluSc SINE Alu -9 300 1 1634 259 26 14 chr20 17206544 17206961 -54946921 - LTR16A LTR ERVL -10 440 19 691 266 139 19 chr20 17207039 17207298 -54946584 + L2 LINE L2 2977 3266 -47 460 186 14 27 chr20 17207482 17207621 -54946261 + MLT2B2 LTR ERVL 1 211 -203 388 152 88 96 chr20 17207623 17207748 -54946134 + MLT2D LTR ERVL 291 414 0 1740 169 7 16 chr20 17207772 17208080 -54945802 + AluJo SINE Alu 1 305 -7 1429 167 13 80 chr20 17208365 17208564 -54945318 + AluJo SINE Alu 1 173 -139 2440 67 3 0 chr20 17208564 17208863 -54945019 - AluY SINE Alu -11 300 1 1429 167 13 80 chr20 17208863 17208974 -54944908 + AluJo SINE Alu 173 290 -22 1091 179 27 31 chr20 17209567 17209791 -54944091 + AluJo SINE Alu 87 309 -3 2330 85 10 7 chr20 17210141 17210447 -54943435 - AluSg1 SINE Alu -2 307 1 9960 136 18 9 chr20 17210684 17212286 -54941596 - Tigger1 DNA MER2_type 0 2418 802 270 291 13 0 chr20 17212887 17212966 -54940916 + CT-rich Low_complexity Low_complexity 2 81 0 4492 125 23 91 chr20 17213383 17214253 -54939629 - Tigger1 DNA MER2_type -1606 812 2 1981 158 16 47 chr20 17214260 17214641 -54939241 + MLT1B LTR MaLR 22 390 0 258 105 0 0 chr20 17214819 17214857 -54939025 + (CAATC)n Simple_repeat Simple_repeat 2 39 0 358 227 56 71 chr20 17215023 17215221 -54938661 + L1ME4a LINE L1 5872 6066 -55 3562 171 31 35 chr20 17215392 17216130 -54937752 - L1MB5 LINE L1 -10 6164 5430 443 283 178 11 chr20 17218326 17218521 -54935361 - MIR SINE MIR -4 258 34 444 373 6 0 chr20 17219316 17219493 -54934389 + MIR3 SINE MIR 20 197 -11 5717 80 26 20 chr20 17219697 17220013 -54933869 - L1PA8A LINE L1 -30 6101 5788 220 51 26 26 chr20 17220013 17220052 -54933830 + (TA)n Simple_repeat Simple_repeat 2 40 0 5717 80 26 20 chr20 17220052 17220472 -54933410 - L1PA8A LINE L1 -343 5788 5357 2236 115 0 13 chr20 17220472 17220786 -54933096 - AluSq SINE Alu -3 310 1 5717 80 26 20 chr20 17220786 17220891 -54932991 - L1PA8A LINE L1 -774 5357 5254 2257 116 0 7 chr20 17221243 17221553 -54932329 + AluSq SINE Alu 1 308 -5 2339 95 0 7 chr20 17221565 17221870 -54932012 + AluSx SINE Alu 1 303 -9 533 182 20 0 chr20 17222572 17222671 -54931211 - MLT1E3 LTR MaLR 0 624 524 393 203 143 60 chr20 17222759 17222892 -54930990 - MLT1E1 LTR MaLR -510 144 1 193 330 138 0 chr20 17223296 17223390 -54930492 - L2 LINE L2 -14 3299 3193 2439 77 0 0 chr20 17223629 17223926 -54929956 - AluSc SINE Alu -12 297 1 21 71 0 0 chr20 17224147 17224189 -54929693 + AT_rich Low_complexity Low_complexity 1 42 0 379 299 56 0 chr20 17224296 17224403 -54929479 - L2 LINE L2 0 3272 3160 25 31 0 0 chr20 17226782 17226814 -54927068 + AT_rich Low_complexity Low_complexity 1 32 0 21 57 0 0 chr20 17228075 17228110 -54925772 + AT_rich Low_complexity Low_complexity 1 35 0 19836 154 48 12 chr20 17228197 17235620 -54918262 - L1MA2 LINE L1 0 7723 24 25 0 0 0 chr20 17235625 17235650 -54918232 + AT_rich Low_complexity Low_complexity 1 25 0 236 261 155 31 chr20 17236497 17236658 -54917224 + L1ME LINE L1 5408 5588 -533 280 246 0 15 chr20 17236658 17236723 -54917159 + (TG)n Simple_repeat Simple_repeat 2 65 0 688 278 40 5 chr20 17236729 17236952 -54916930 + L1ME LINE L1 5592 5822 -299 2395 88 0 3 chr20 17238411 17238719 -54915163 + AluSc SINE Alu 1 307 -2 25 0 0 0 chr20 17239269 17239294 -54914588 + AT_rich Low_complexity Low_complexity 1 25 0 459 311 25 0 chr20 17239317 17239436 -54914446 + L2 LINE L2 3188 3309 -4 23 0 0 0 chr20 17239668 17239691 -54914191 + AT_rich Low_complexity Low_complexity 1 23 0 25 51 0 0 chr20 17239814 17239853 -54914029 + AT_rich Low_complexity Low_complexity 1 39 0 208 53 53 0 chr20 17239853 17239891 -54913991 + (TTATA)n Simple_repeat Simple_repeat 5 44 0 508 99 56 12 chr20 17239903 17240065 -54913817 + (TA)n Simple_repeat Simple_repeat 2 170 0 44 20 0 0 chr20 17240065 17240116 -54913766 + AT_rich Low_complexity Low_complexity 1 51 0 1538 253 89 45 chr20 17240875 17241423 -54912459 + L1ME3A LINE L1 5474 6058 -112 2390 86 0 0 chr20 17241423 17241715 -54912167 - AluSg SINE Alu -18 292 1 1538 253 89 45 chr20 17241715 17241831 -54912051 + L1ME3A LINE L1 6058 6167 -3 601 283 23 74 chr20 17242578 17242693 -54911189 - MIR SINE MIR -8 254 135 1953 128 52 6 chr20 17242693 17243038 -54910844 + MER46B DNA MER2_type 1 236 0 601 283 23 74 chr20 17243038 17243180 -54910702 - MIR SINE MIR -127 135 10 1853 158 20 7 chr20 17244050 17244348 -54909534 + AluSx SINE Alu 1 302 -10 366 247 0 34 chr20 17245154 17245243 -54908639 + MIR SINE MIR 56 141 -121 295 350 43 21 chr20 17246116 17246302 -54907580 - L2 LINE L2 -1285 2029 1840 213 292 99 109 chr20 17246588 17246780 -54907102 + L2 LINE L2 2632 2821 -493 1656 179 3 27 chr20 17247326 17247622 -54906260 + AluJo SINE Alu 1 289 -23 334 303 126 11 chr20 17247912 17248087 -54905795 - MIR SINE MIR -4 258 64 2377 204 7 76 chr20 17248366 17249077 -54904805 + L1MD2 LINE L1 5314 5935 -255 1629 153 44 26 chr20 17249087 17249427 -54904455 - L1MA7 LINE L1 -6 6285 5940 2476 149 39 5 chr20 17249431 17250008 -54903874 + L1M2 LINE L1 5115 5714 -577 692 240 64 80 chr20 17250026 17250123 -54903759 + L1MD2 LINE L1 5921 6018 -341 2344 94 0 0 chr20 17250123 17250420 -54903462 - AluSg SINE Alu -13 297 1 692 240 64 80 chr20 17250420 17250635 -54903247 + L1MD2 LINE L1 6018 6228 -131 * 973 151 104 0 chr20 17250629 17250821 -54903061 + L1PA16 LINE L1 5938 6149 -17 390 246 108 0 chr20 17250835 17250965 -54902917 + L1MD2 LINE L1 6214 6357 -2 214 300 146 27 chr20 17252098 17252208 -54901674 + L3 LINE CR1 1231 1353 -224 244 263 26 9 chr20 17252219 17252333 -54901549 + (TA)n Simple_repeat Simple_repeat 2 117 0 2414 77 0 3 chr20 17252365 17252663 -54901219 - AluSc SINE Alu -11 298 2 22 0 0 0 chr20 17252668 17252690 -54901192 + AT_rich Low_complexity Low_complexity 1 22 0 263 229 36 6 chr20 17252694 17252860 -54901022 + (TA)n Simple_repeat Simple_repeat 2 172 0 2073 124 3 10 chr20 17253302 17253600 -54900282 - AluSx SINE Alu -16 296 1 1177 215 124 43 chr20 17253784 17254156 -54899726 + MER92B LTR ERV1 2 403 -233 464 213 0 0 chr20 17254175 17254269 -54899613 + MER92B LTR ERV1 543 636 0 25 0 0 0 chr20 17254451 17254476 -54899406 + AT_rich Low_complexity Low_complexity 1 25 0 21 36 0 0 chr20 17254916 17254944 -54898938 + AT_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr20 17255108 17255138 -54898744 + AT_rich Low_complexity Low_complexity 1 30 0 1716 113 0 128 chr20 17255537 17255872 -54898010 - AluSx SINE Alu -10 292 1 2217 58 65 3 chr20 17256621 17256912 -54896970 - AluY SINE Alu 0 311 3 413 273 55 0 chr20 17257093 17257203 -54896679 + MIR SINE MIR 11 126 -136 2196 101 31 0 chr20 17257275 17257563 -54896319 - AluSq SINE Alu -16 297 1 30 27 0 0 chr20 17257662 17257699 -54896183 + AT_rich Low_complexity Low_complexity 1 37 0 2264 83 0 49 chr20 17258221 17258545 -54895337 + AluSc SINE Alu 1 308 -1 1678 201 64 39 chr20 17259279 17259732 -54894150 - MER31B LTR ERV1 0 661 1 959 186 16 78 chr20 17259765 17260007 -54893875 - MER31B-int LTR ERV1 -370 4566 4340 292 210 136 12 chr20 17260018 17260099 -54893783 - LTR37A LTR ERV1 -335 91 1 1645 158 48 41 chr20 17260118 17260247 -54893635 - MER31B-int LTR ERV1 -727 4209 4082 2474 82 0 0 chr20 17260247 17260551 -54893331 - AluY SINE Alu -7 304 1 1645 158 48 41 chr20 17260551 17260737 -54893145 - MER31B-int LTR ERV1 -854 4082 3892 371 191 0 0 chr20 17260745 17260808 -54893074 - Charlie3 DNA MER1_type -21 2689 2627 247 209 0 0 chr20 17260805 17260848 -54893034 - Charlie3 DNA MER1_type -2612 98 56 * 12310 193 84 76 chr20 17260864 17262005 -54891877 - MER31B-int LTR ERV1 -1032 3904 2774 2305 92 0 3 chr20 17262005 17262311 -54891571 + AluSq SINE Alu 1 305 -8 12310 193 84 76 chr20 17262311 17262511 -54891371 - MER31B-int LTR ERV1 -2162 2774 2577 2535 70 3 0 chr20 17262511 17262823 -54891059 + AluSp SINE Alu 1 313 0 12310 193 84 76 chr20 17262823 17264034 -54889848 - MER31B-int LTR ERV1 -2359 2577 1377 1757 129 3 93 chr20 17264034 17264344 -54889538 - AluJb SINE Alu -30 282 1 12310 193 84 76 chr20 17264344 17265255 -54888627 - MER31B-int LTR ERV1 -3559 1377 402 3876 185 35 1 chr20 17265255 17265963 -54887919 - MER44D DNA MER2_type -1 604 1 12310 193 84 76 chr20 17265963 17266355 -54887527 - MER31B-int LTR ERV1 -4534 402 15 1670 189 102 50 chr20 17266405 17266847 -54887035 - MER31B LTR ERV1 0 543 1 632 233 70 54 chr20 17267053 17267311 -54886571 + LTR37A LTR ERV1 43 304 -122 2238 116 3 0 chr20 17267366 17267659 -54886223 - AluSx SINE Alu -18 294 1 2393 71 3 0 chr20 17267764 17268059 -54885823 - AluY SINE Alu -15 296 1 576 250 45 34 chr20 17268069 17268245 -54885637 - MIR SINE MIR -43 219 42 190 279 213 0 chr20 17268272 17268333 -54885549 - MIR SINE MIR -185 77 4 890 138 0 0 chr20 17268802 17268925 -54884957 - FLAM_C SINE Alu -20 123 1 2419 85 0 0 chr20 17269153 17269460 -54884422 + AluY SINE Alu 1 307 -4 325 151 27 14 chr20 17269682 17269755 -54884127 + MLT1H LTR MaLR 471 544 -5 189 0 0 0 chr20 17270368 17270389 -54883493 + (CA)n Simple_repeat Simple_repeat 2 22 0 512 222 248 36 chr20 17270562 17270923 -54882959 - MLT1H LTR MaLR -12 583 119 609 270 60 75 chr20 17271199 17271451 -54882431 - MER102a DNA MER1_type -15 315 68 1963 125 7 0 chr20 17271466 17271774 -54882108 + AluSx SINE Alu 1 310 0 182 314 96 32 chr20 17271988 17272144 -54881738 + L2 LINE L2 2888 3053 -219 445 258 65 32 chr20 17272768 17272892 -54880990 - MIR SINE MIR -133 129 2 2279 95 3 0 chr20 17273293 17273589 -54880293 + AluSc SINE Alu 2 298 -11 2349 82 0 3 chr20 17273602 17273907 -54879975 + AluY SINE Alu 1 304 -7 374 302 126 5 chr20 17273957 17274172 -54879710 - MER112 DNA MER1_type -12 248 8 373 240 0 0 chr20 17274702 17274777 -54879105 - MIR SINE MIR -121 141 67 819 251 76 5 chr20 17274929 17275140 -54878742 + MIR SINE MIR 26 251 -11 584 348 182 15 chr20 17276006 17276650 -54877232 - L2 LINE L2 -646 2668 1901 1244 121 226 46 chr20 17276650 17276689 -54877193 - MER46B DNA MER2_type -2495 236 205 1924 150 3 0 chr20 17276689 17276975 -54876907 + AluJb SINE Alu 4 290 -22 1244 121 226 46 chr20 17276975 17277241 -54876641 - MER46B DNA MER2_type -2526 205 1 584 348 182 15 chr20 17277241 17277282 -54876600 - L2 LINE L2 -1413 1901 1868 263 308 88 50 chr20 17277324 17277506 -54876376 + MLT1J2 LTR MaLR 256 444 -6 217 267 107 61 chr20 17277928 17278059 -54875823 + L2 LINE L2 2456 2592 -722 263 329 102 0 chr20 17278113 17278250 -54875632 + L2 LINE L2 2862 3012 -260 223 346 74 31 chr20 17278301 17278463 -54875419 + L2 LINE L2 3140 3308 -5 437 293 38 25 chr20 17280101 17280258 -54873624 + L2 LINE L2 223 381 -2933 238 186 0 129 chr20 17280479 17280549 -54873333 + MLT1J LTR MaLR 342 402 -109 586 322 150 10 chr20 17280742 17281056 -54872826 + L2 LINE L2 2955 3312 -1 587 286 148 24 chr20 17281067 17281399 -54872483 + L2 LINE L2 2939 3311 -2 2467 81 0 10 chr20 17281771 17282081 -54871801 + AluSc SINE Alu 1 307 -2 206 254 0 30 chr20 17282187 17282254 -54871628 + A-rich Low_complexity Low_complexity 2 66 0 28 0 0 0 chr20 17282422 17282450 -54871432 + AT_rich Low_complexity Low_complexity 1 28 0 1898 231 68 84 chr20 17282491 17283696 -54870186 - L1ME3A LINE L1 -9 6161 4897 346 333 87 36 chr20 17283815 17284262 -54869620 + L1M4 LINE L1 2574 3043 -3103 289 313 109 34 chr20 17284770 17284917 -54868965 - L2 LINE L2 0 3272 3115 23 33 0 0 chr20 17285175 17285205 -54868677 + AT_rich Low_complexity Low_complexity 1 30 0 312 301 48 63 chr20 17285920 17286126 -54867756 + L2 LINE L2 1868 2070 -1244 21 36 0 0 chr20 17286643 17286671 -54867211 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr20 17286823 17286851 -54867031 + AT_rich Low_complexity Low_complexity 1 28 0 204 219 0 0 chr20 17287616 17287657 -54866225 + A-rich Low_complexity Low_complexity 5 45 0 24 32 0 0 chr20 17288281 17288312 -54865570 + AT_rich Low_complexity Low_complexity 1 31 0 377 314 174 4 chr20 17289498 17289734 -54864148 - L1MC4a LINE L1 -1746 6062 5787 344 308 119 63 chr20 17289793 17290142 -54863740 - L1MEd LINE L1 -1329 1161 824 2280 84 0 10 chr20 17290608 17290906 -54862976 - AluSq SINE Alu -13 300 6 2034 106 6 48 chr20 17290943 17291254 -54862628 - AluSq SINE Alu -15 298 1 204 67 0 0 chr20 17291508 17291538 -54862344 + (T)n Simple_repeat Simple_repeat 1 30 0 26 30 0 0 chr20 17292046 17292079 -54861803 + AT_rich Low_complexity Low_complexity 1 33 0 350 330 47 60 chr20 17292104 17292165 -54861717 - HAL1 LINE L1 -877 1630 1570 2371 161 19 30 chr20 17292165 17292631 -54861251 + LOR1b LTR ERV1 1 461 0 350 330 47 60 chr20 17292631 17292802 -54861080 - HAL1 LINE L1 -937 1570 1401 331 274 81 24 chr20 17292910 17293034 -54860848 - L1MEd LINE L1 -4964 1155 1025 2403 80 0 32 chr20 17293237 17293548 -54860334 - AluSg SINE Alu -9 301 1 282 309 71 27 chr20 17293609 17293864 -54860018 - L1ME3A LINE L1 -222 5948 5681 310 220 35 165 chr20 17293883 17293955 -54859927 - MER112 DNA MER1_type -6 254 174 378 0 0 0 chr20 17293955 17293997 -54859885 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 310 220 35 165 chr20 17293997 17294124 -54859758 - MER112 DNA MER1_type -86 174 81 431 313 75 0 chr20 17294164 17294324 -54859558 - L1ME3A LINE L1 -514 5648 5477 226 224 20 0 chr20 17294453 17294502 -54859380 + HSMAR1 DNA Mariner 747 796 -491 1016 290 107 46 chr20 17294578 17295360 -54858522 - L1MEd LINE L1 -4875 1244 415 3883 98 159 111 chr20 17295364 17296694 -54857188 + pTR5 LTR ERV1 742 2438 0 260 197 49 0 chr20 17296721 17296782 -54857100 - L1MEd LINE L1 -5732 387 324 2775 187 74 135 chr20 17296789 17297493 -54856389 + MER21A LTR ERV1 12 757 -174 1938 163 0 3 chr20 17297493 17297794 -54856088 + AluJo SINE Alu 1 300 -12 2775 187 74 135 chr20 17297794 17297913 -54855969 + MER21A LTR ERV1 757 770 -161 1888 141 20 23 chr20 17297913 17298212 -54855670 + AluSx SINE Alu 1 298 -14 2775 187 74 135 chr20 17298212 17298360 -54855522 + MER21A LTR ERV1 770 925 -6 304 285 252 33 chr20 17298499 17298741 -54855141 - HAL1 LINE L1 -1387 1120 826 2733 139 78 95 chr20 17299858 17300144 -54853738 + MER7C DNA MER2_type 1 290 -2738 1155 80 0 0 chr20 17300144 17300294 -54853588 + L1PB1 LINE L1 5996 6145 -6 2733 139 78 95 chr20 17300294 17300619 -54853263 + MER7C DNA MER2_type 290 602 0 963 223 42 0 chr20 17302188 17302381 -54851501 + MIR SINE MIR 41 241 -21 2239 92 3 7 chr20 17302404 17302698 -54851184 - AluSx SINE Alu -17 295 3 941 178 62 40 chr20 17302753 17302978 -54850904 - AluJo SINE Alu -81 231 2 1055 171 6 0 chr20 17303837 17304018 -54849864 + AluJb SINE Alu 88 269 -43 263 258 141 55 chr20 17304268 17304396 -54849486 + MER5A DNA MER1_type 47 185 -4 195 328 0 0 chr20 17304370 17304431 -54849451 - L2 LINE L2 -7 3265 3205 * 2505 54 0 0 chr20 17304557 17304852 -54849030 - AluY SINE Alu -16 295 1 240 309 12 0 chr20 17305436 17305520 -54848362 + L1MC4a LINE L1 4080 4164 -1982 370 153 97 0 chr20 17305947 17306019 -54847863 + MIR SINE MIR 183 261 -1 440 289 86 39 chr20 17306085 17306439 -54847443 + L1MC4a LINE L1 5456 5739 -382 2322 62 0 10 chr20 17306439 17306757 -54847125 + AluY SINE Alu 1 311 0 440 289 86 39 chr20 17306757 17306844 -54847038 + L1MC4a LINE L1 5739 5820 -301 602 281 138 0 chr20 17307801 17308004 -54845878 - MIR SINE MIR -21 241 11 442 308 117 29 chr20 17308048 17308596 -54845286 + L1ME LINE L1 5272 5855 -266 247 254 315 22 chr20 17308710 17308891 -54844991 + MIR SINE MIR 15 248 -14 192 77 0 0 chr20 17309945 17309971 -54843911 + (GGGA)n Simple_repeat Simple_repeat 2 27 0 1947 139 0 17 chr20 17310015 17310317 -54843565 + AluSx SINE Alu 13 309 -3 1411 204 4 22 chr20 17310375 17310644 -54843238 + AluJo SINE Alu 1 264 -48 385 329 84 32 chr20 17310939 17311188 -54842694 - L3 LINE CR1 -12 1565 1304 1276 234 67 46 chr20 17311391 17311852 -54842030 + HsTC2a DNA Tc2 11 481 -263 27196 115 34 71 chr20 17311855 17318264 -54835618 + L1PA10 LINE L1 12 6168 0 512 176 92 142 chr20 17318268 17318529 -54835353 + HsTC2a DNA Tc2 465 712 -30 482 241 8 77 chr20 17318592 17318798 -54835084 + MLT1J1 LTR MaLR 16 213 -237 316 233 48 10 chr20 17318935 17319038 -54834844 + MLT1J2 LTR MaLR 344 450 0 2524 63 0 0 chr20 17319426 17319728 -54834154 + AluY SINE Alu 3 304 -7 364 207 22 7 chr20 17319729 17319830 -54834052 + L1MB4 LINE L1 611 900 -5746 379 170 170 105 chr20 17319902 17320208 -54833674 + L1MB4 LINE L1 837 1162 -5380 2332 91 0 0 chr20 17320226 17320522 -54833360 - AluSp SINE Alu -17 296 1 2573 151 50 74 chr20 17320648 17321140 -54832742 + LTR8A LTR ERV1 83 556 -171 1972 129 7 14 chr20 17321140 17321435 -54832447 + AluY SINE Alu 1 293 -18 2573 151 50 74 chr20 17321435 17321603 -54832279 + LTR8A LTR ERV1 556 727 0 803 164 121 39 chr20 17321690 17321922 -54831960 + LTR45B LTR ERV1 225 475 -14 399 191 136 0 chr20 17321993 17322140 -54831742 + L1MB4 LINE L1 1229 1395 -5251 6902 207 100 20 chr20 17322149 17325116 -54828766 + L1MB4 LINE L1 3311 6537 -141 1475 199 27 17 chr20 17325116 17325413 -54828469 - AluJo SINE Alu -12 300 1 6902 207 100 20 chr20 17325413 17325568 -54828314 + L1MB4 LINE L1 6537 6678 0 1789 161 39 16 chr20 17325617 17325922 -54827960 + AluJb SINE Alu 1 312 0 1799 84 38 11 chr20 17326775 17327038 -54826844 + AluSq SINE Alu 37 306 -7 2513 63 0 0 chr20 17327141 17327443 -54826439 + AluY SINE Alu 1 302 -9 13819 125 53 25 chr20 17327446 17328508 -54825374 + Tigger2 DNA MER2_type 1 1031 -1687 1907 160 7 0 chr20 17328508 17328801 -54825081 + AluSx SINE Alu 3 297 -15 13819 125 53 25 chr20 17328801 17328884 -54824998 + Tigger2 DNA MER2_type 1031 1110 -1608 2349 67 0 7 chr20 17328884 17329182 -54824700 + AluY SINE Alu 1 296 -15 13819 125 53 25 chr20 17329182 17330531 -54823351 + Tigger2 DNA MER2_type 1110 2567 -151 7630 155 22 3 chr20 17330560 17332720 -54821162 - L1PA11 LINE L1 0 6174 3999 21 0 0 0 chr20 17332729 17332750 -54821132 + AT_rich Low_complexity Low_complexity 1 21 0 205 215 31 31 chr20 17333094 17333159 -54820723 + (TCTA)n Simple_repeat Simple_repeat 3 67 0 209 274 20 0 chr20 17333296 17333347 -54820535 + GA-rich Low_complexity Low_complexity 5 56 0 819 201 73 19 chr20 17333374 17333650 -54820232 + L1MC5 LINE L1 6959 7247 -728 1506 191 35 85 chr20 17333782 17334406 -54819476 + L1MC5 LINE L1 7268 7860 -101 2022 156 12 6 chr20 17334415 17334761 -54819121 - MER7A DNA MER2_type 0 346 1 1912 136 7 14 chr20 17334815 17335110 -54818772 + AluSx SINE Alu 4 296 -16 25 31 0 0 chr20 17336015 17336047 -54817835 + AT_rich Low_complexity Low_complexity 1 32 0 1210 147 118 0 chr20 17336493 17336704 -54817178 + MER46A DNA MER2_type 1 236 0 239 231 165 74 chr20 17336769 17336890 -54816992 - MIR3 SINE MIR -71 137 6 1709 161 67 85 chr20 17338728 17339164 -54814718 + MSTA LTR MaLR 1 428 0 531 234 133 37 chr20 17339383 17339571 -54814311 - MIR SINE MIR -12 250 45 732 287 118 22 chr20 17339912 17340414 -54813468 + Charlie7 DNA MER1_type 12 561 -2051 1160 79 0 0 chr20 17340690 17340830 -54813052 - AluSc SINE Alu -20 289 150 209 176 0 0 chr20 17340987 17341021 -54812861 + MIR SINE MIR 95 128 -134 * 489 242 81 34 chr20 17341019 17341168 -54812714 - MIR SINE MIR -91 171 16 450 245 29 0 chr20 17341194 17341296 -54812586 + MIR SINE MIR 158 262 0 2242 100 0 3 chr20 17341739 17342039 -54811843 - AluSg SINE Alu -11 299 1 28 0 0 0 chr20 17342847 17342875 -54811007 + AT_rich Low_complexity Low_complexity 1 28 0 204 296 12 12 chr20 17344674 17344755 -54809127 + (CG)n Simple_repeat Simple_repeat 1 81 0 307 306 97 21 chr20 17344755 17344899 -54808983 + L1MDb LINE L1 541 695 -5714 332 292 44 84 chr20 17345311 17345561 -54808321 - L1M2 LINE L1 -5826 1023 784 1903 123 58 3 chr20 17346392 17346684 -54807198 - AluSq SINE Alu -5 308 1 198 245 0 20 chr20 17346722 17346771 -54807111 - L2 LINE L2 -208 3064 3017 519 309 143 41 chr20 17347286 17347677 -54806205 + L2 LINE L2 2325 2755 -559 989 199 112 64 chr20 17347687 17348044 -54805838 + MLT1A2 LTR MaLR 1 374 0 2370 98 0 0 chr20 17348196 17348491 -54805391 - AluSq SINE Alu -18 295 1 208 315 18 45 chr20 17348540 17348651 -54805231 + L2 LINE L2 2988 3095 -218 1813 156 0 48 chr20 17348688 17349002 -54804880 - AluSx SINE Alu -13 299 1 1332 203 103 32 chr20 17349006 17349376 -54804506 + MLT1D LTR MaLR 108 503 -2 473 167 0 0 chr20 17350817 17350889 -54802993 + tRNA-Glu-GAG tRNA tRNA 1 72 -3 4464 179 30 78 chr20 17350911 17351671 -54802211 + L1MB5 LINE L1 3802 4597 -1577 2041 113 3 11 chr20 17351671 17351982 -54801900 - AluSq SINE Alu 0 311 3 4464 179 30 78 chr20 17351982 17352375 -54801507 + L1MB5 LINE L1 4597 5007 -1167 687 191 0 50 chr20 17352375 17352516 -54801366 + AluJo SINE Alu 1 134 -178 4464 179 30 78 chr20 17352516 17353065 -54800817 + L1MB5 LINE L1 5007 5581 -593 2266 92 0 16 chr20 17353065 17353368 -54800514 + AluSc SINE Alu 1 298 -11 4464 179 30 78 chr20 17353368 17353532 -54800350 + L1MB5 LINE L1 5581 5751 -423 457 56 11 124 chr20 17353532 17353582 -54800300 - MADE1 DNA Mariner 0 80 43 2389 68 3 0 chr20 17353582 17353875 -54800007 + AluY SINE Alu 1 294 -17 457 56 11 124 chr20 17353875 17353913 -54799969 - MADE1 DNA Mariner -37 43 2 4464 179 30 78 chr20 17353913 17354474 -54799408 + L1MB5 LINE L1 5751 6168 -6 2512 169 61 6 chr20 17354478 17355017 -54798865 + L1MB8 LINE L1 5550 6118 -60 299 335 123 70 chr20 17355026 17355571 -54798311 - L2 LINE L2 -12 3260 2688 1981 122 21 3 chr20 17355571 17355906 -54797976 + L1MA5 LINE L1 5960 6300 0 215 100 0 25 chr20 17355999 17356039 -54797843 + (GGGGA)n Simple_repeat Simple_repeat 5 43 0 207 162 0 0 chr20 17356031 17356068 -54797814 + GA-rich Low_complexity Low_complexity 2 38 0 * 223 368 85 0 chr20 17356105 17356211 -54797671 - L2 LINE L2 -665 2649 2535 * 282 304 104 76 chr20 17356178 17356401 -54797481 - L2 LINE L2 -1226 2088 1854 2213 99 14 0 chr20 17356401 17356693 -54797189 + AluSx SINE Alu 1 296 -16 282 304 104 76 chr20 17356693 17356758 -54797124 - L2 LINE L2 -1460 1854 1792 2305 105 3 3 chr20 17356892 17357205 -54796677 + AluSp SINE Alu 1 313 0 2419 82 3 3 chr20 17357664 17357968 -54795914 - AluSc SINE Alu -5 304 1 1844 177 7 0 chr20 17358184 17358484 -54795398 - AluJo SINE Alu -10 302 1 5433 170 22 89 chr20 17359122 17359444 -54794438 - L1MA7 LINE L1 -5 6286 5944 2205 107 3 16 chr20 17359444 17359752 -54794130 - AluSq SINE Alu -9 304 1 5433 170 22 89 chr20 17359752 17360205 -54793677 - L1MA7 LINE L1 -347 5944 5463 2121 104 29 0 chr20 17360205 17360485 -54793397 + AluSx SINE Alu 1 288 -24 5433 170 22 89 chr20 17360485 17361161 -54792721 - L1MA7 LINE L1 -828 5463 5050 4216 135 29 52 chr20 17361161 17361624 -54792258 - L1MA5 LINE L1 0 6300 5865 1972 151 3 10 chr20 17361624 17361936 -54791946 - AluSx SINE Alu 0 312 3 4216 135 29 52 chr20 17361936 17362333 -54791549 - L1MA5 LINE L1 -435 5865 5460 5433 170 22 89 chr20 17362333 17362904 -54790978 - L1MA7 LINE L1 -1241 5050 4443 230 308 169 30 chr20 17363327 17363564 -54790318 + L2 LINE L2 2025 2294 -1020 293 319 168 0 chr20 17363723 17363836 -54790046 - MIR3 SINE MIR -37 171 40 2141 101 0 0 chr20 17364415 17364720 -54789162 + AluSc SINE Alu 3 307 0 766 149 0 57 chr20 17364727 17364868 -54789014 + FLAM_C SINE Alu 11 143 0 220 333 73 49 chr20 17364949 17365072 -54788810 + L2 LINE L2 3142 3267 -5 21 57 0 0 chr20 17365148 17365183 -54788699 + AT_rich Low_complexity Low_complexity 1 35 0 2049 124 38 0 chr20 17365947 17366237 -54787645 + AluSx SINE Alu 3 303 -9 247 335 53 44 chr20 17366792 17367019 -54786863 + L1MEd LINE L1 445 673 -5446 516 167 0 0 chr20 17367307 17367397 -54786485 + U6 snRNA snRNA 18 107 0 927 263 67 68 chr20 17367450 17368210 -54785672 + HAL1 LINE L1 991 1749 -758 356 274 68 67 chr20 17368519 17368978 -54784904 + L1M3 LINE L1 4588 4993 -1175 1921 141 0 31 chr20 17368978 17369296 -54784586 + AluSx SINE Alu 1 309 0 356 274 68 67 chr20 17369296 17369752 -54784130 + L1M3 LINE L1 4993 5447 -721 28 71 0 0 chr20 17369802 17369858 -54784024 + AT_rich Low_complexity Low_complexity 1 56 0 2156 126 3 0 chr20 17369869 17370162 -54783720 - AluSq SINE Alu -19 294 1 356 310 22 30 chr20 17370181 17370413 -54783469 + L1MC/D LINE L1 5526 5755 -2053 229 303 0 15 chr20 17370863 17370929 -54782953 - L2 LINE L2 0 3313 3249 192 286 157 0 chr20 17371193 17371263 -54782619 - MIR SINE MIR -14 248 168 314 188 0 0 chr20 17372289 17372337 -54781545 - L2 LINE L2 -16 3256 3209 2310 110 0 3 chr20 17373532 17373833 -54780049 + AluSg SINE Alu 1 300 -10 355 224 51 31 chr20 17373923 17374021 -54779861 - MIR SINE MIR -66 196 97 2136 137 0 3 chr20 17374093 17374443 -54779439 + AluSx SINE Alu 1 349 0 1300 139 14 0 chr20 17374515 17374738 -54779144 + Tigger1 DNA MER2_type 1 226 -2192 2326 83 0 17 chr20 17374738 17375040 -54778842 - AluSc SINE Alu -12 297 1 2186 69 4 7 chr20 17375989 17376265 -54777617 + AluSp SINE Alu 31 305 -8 180 0 0 0 chr20 17376338 17376358 -54777524 + (GGGTG)n Simple_repeat Simple_repeat 2 21 0 759 197 27 84 chr20 17376362 17376539 -54777343 + MER115 DNA AcHobo 452 637 -3394 2046 122 0 14 chr20 17376539 17376834 -54777048 + AluSg SINE Alu 1 291 -19 759 197 27 84 chr20 17376834 17376913 -54776969 + MER115 DNA AcHobo 637 4030 -1 2236 115 3 0 chr20 17376973 17377278 -54776604 - AluSx SINE Alu -6 306 1 261 0 0 0 chr20 17377292 17377321 -54776561 + (T)n Simple_repeat Simple_repeat 1 29 0 2068 145 3 10 chr20 17377618 17377929 -54775953 - AluSg SINE Alu -1 309 1 760 201 121 69 chr20 17378076 17378552 -54775330 - MLT1H LTR MaLR -4 545 5 291 216 171 11 chr20 17379512 17379600 -54774282 + MIR SINE MIR 13 114 -148 233 173 62 12 chr20 17379785 17379866 -54774016 - Charlie7 DNA MER1_type -69 2543 2459 8925 85 18 14 chr20 17380830 17381773 -54772109 - HSMAR1 DNA Mariner 0 1287 336 2076 60 74 28 chr20 17381773 17382056 -54771826 - AluY SINE Alu -13 298 3 8925 85 18 14 chr20 17382056 17382386 -54771496 - HSMAR1 DNA Mariner -951 336 9 21 0 0 0 chr20 17382437 17382458 -54771424 + AT_rich Low_complexity Low_complexity 1 21 0 193 319 106 0 chr20 17382458 17382552 -54771330 - MIR SINE MIR -4 258 155 26 0 0 0 chr20 17382677 17382703 -54771179 + AT_rich Low_complexity Low_complexity 1 26 0 1743 178 3 3 chr20 17382825 17383118 -54770764 - AluJb SINE Alu -19 293 1 1882 161 7 3 chr20 17383311 17383616 -54770266 + AluSx SINE Alu 1 306 -6 24 0 0 0 chr20 17384546 17384570 -54769312 + AT_rich Low_complexity Low_complexity 1 24 0 190 71 0 0 chr20 17384765 17384793 -54769089 - L2 LINE L2 -1 3271 3244 520 70 0 0 chr20 17384865 17384936 -54768946 + MADE1 DNA Mariner 1 71 -9 1389 242 100 36 chr20 17385051 17385655 -54768227 + L2 LINE L2 2662 3313 0 202 53 0 53 chr20 17386145 17386183 -54767699 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 1705 155 54 33 chr20 17386858 17387194 -54766688 - MER61A LTR ERV1 0 343 1 10659 89 60 11 chr20 17387194 17387743 -54766139 - MER61A-int LTR ERV1 0 5217 4697 1634 104 22 5 chr20 17387743 17387965 -54765917 - AluSc SINE Alu -83 226 1 10659 89 60 11 chr20 17387965 17388840 -54765042 - MER61A-int LTR ERV1 -520 4697 3699 195 100 0 0 chr20 17388840 17388870 -54765012 + (TTGG)n Simple_repeat Simple_repeat 2 31 0 10659 89 60 11 chr20 17388870 17389086 -54764796 - MER61A-int LTR ERV1 -1518 3699 3495 1974 98 55 0 chr20 17389092 17389366 -54764516 - AluY SINE Alu -8 303 15 2690 39 0 3 chr20 17389406 17389718 -54764164 - AluY SINE Alu 0 311 1 557 260 373 17 chr20 17389762 17390282 -54763600 + L2 LINE L2 320 1024 -2290 3814 173 62 28 chr20 17390365 17391016 -54762866 - L1MB2 LINE L1 -7 6164 5464 2395 73 3 13 chr20 17391016 17391330 -54762552 - AluY SINE Alu 0 311 1 3814 173 62 28 chr20 17391330 17391711 -54762171 - L1MB2 LINE L1 -707 5464 5097 510 143 133 0 chr20 17391714 17391819 -54762063 + LOR1a LTR ERV1 3 121 -376 * 834 115 126 82 chr20 17391818 17392001 -54761881 + LOR1a LTR ERV1 307 497 0 2511 194 21 5 chr20 17392001 17392573 -54761309 - L1MB2 LINE L1 -1047 5099 4519 7830 177 102 19 chr20 17392586 17394205 -54759677 - MER52A LTR ERV1 0 1755 1 3347 186 22 67 chr20 17394205 17395173 -54758709 - L1MB2 LINE L1 -1637 4509 3586 195 42 0 0 chr20 17395211 17395235 -54758647 + (TA)n Simple_repeat Simple_repeat 2 25 0 686 226 51 14 chr20 17395325 17395542 -54758340 - MER46C DNA MER2_type -98 240 16 1054 269 29 101 chr20 17395560 17396046 -54757836 + L2 LINE L2 1044 1494 -1820 907 306 250 6 chr20 17396073 17396589 -54757293 + L2 LINE L2 2302 2943 -371 719 238 6 17 chr20 17396589 17396770 -54757112 + LTR28 LTR ERV1 1 179 -841 273 107 21 73 chr20 17396798 17396866 -54757016 + LTR27 LTR ERV1 266 320 -316 182 162 27 0 chr20 17397092 17397129 -54756753 + L2 LINE L2 3276 3313 0 821 178 159 0 chr20 17398148 17398311 -54755571 - MER5A DNA MER1_type 0 189 1 213 235 111 72 chr20 17399043 17399196 -54754686 + L2 LINE L2 2346 2504 -810 240 264 31 47 chr20 17399226 17399355 -54754527 - MER87 LTR ERV1 -20 521 395 1022 310 62 48 chr20 17399675 17399802 -54754080 + L2 LINE L2 2524 2648 -665 1797 97 131 0 chr20 17399802 17400061 -54753821 - AluSx SINE Alu -9 293 1 1022 310 62 48 chr20 17400061 17400708 -54753174 + L2 LINE L2 2648 3313 0 2356 109 0 0 chr20 17400746 17401050 -54752832 + AluSq SINE Alu 1 304 -9 2281 117 0 3 chr20 17401370 17401677 -54752205 + AluSg SINE Alu 1 306 -4 787 209 93 11 chr20 17401878 17402060 -54751822 - MIR SINE MIR 0 262 66 2417 103 0 0 chr20 17402334 17402644 -54751238 + AluSg SINE Alu 1 310 0 1601 156 145 16 chr20 17403070 17403443 -54750439 - MER61C LTR ERV1 0 434 14 3300 149 102 31 chr20 17403886 17404565 -54749317 - LTR8A LTR ERV1 0 727 1 870 277 151 28 chr20 17404747 17405461 -54748421 + L2 LINE L2 2499 3301 -12 285 305 32 0 chr20 17405745 17405840 -54748042 + MLT1J2 LTR MaLR 7 104 -346 2512 89 13 0 chr20 17405860 17406242 -54747640 + L1PB1 LINE L1 5415 5801 -350 355 130 65 0 chr20 17406242 17406365 -54747517 + (TA)n Simple_repeat Simple_repeat 2 132 0 2458 129 3 3 chr20 17406368 17406741 -54747141 + L1PB1 LINE L1 5779 6151 0 23 0 0 0 chr20 17406801 17406824 -54747058 + AT_rich Low_complexity Low_complexity 1 23 0 202 155 52 0 chr20 17406874 17406932 -54746950 + (CAAAG)n Simple_repeat Simple_repeat 2 62 0 428 208 25 67 chr20 17406961 17407081 -54746801 + MLT1J1 LTR MaLR 202 316 -130 1978 150 8 49 chr20 17407088 17407475 -54746407 + L1MB8 LINE L1 5802 6172 -6 1762 142 40 13 chr20 17407479 17407782 -54746100 - AluSx SINE Alu -1 311 1 2164 106 7 0 chr20 17407982 17408305 -54745577 + AluSx SINE Alu 1 325 0 1045 167 0 74 chr20 17409255 17409383 -54744499 - AluJo SINE Alu 0 313 208 2183 64 53 0 chr20 17409383 17409664 -54744218 + AluY SINE Alu 1 296 -15 1045 167 0 74 chr20 17409664 17409779 -54744103 - AluJo SINE Alu -105 208 86 1155 241 99 55 chr20 17410161 17410622 -54743260 - LTR33 LTR ERVL -6 515 76 1876 161 0 0 chr20 17410622 17410914 -54742968 + AluSx SINE Alu 1 292 -20 2491 51 3 16 chr20 17410914 17411225 -54742657 + AluY SINE Alu 1 307 -4 1155 241 99 55 chr20 17411225 17411255 -54742627 - LTR33 LTR ERVL -444 77 1 181 184 0 26 chr20 17411354 17411392 -54742490 - L3 LINE CR1 -10 1567 1531 1169 220 54 74 chr20 17411412 17411817 -54742065 - MLT2C1 LTR ERVL 0 397 1 187 262 48 48 chr20 17411817 17411901 -54741981 - L3 LINE CR1 -695 882 799 443 273 136 50 chr20 17411921 17412141 -54741741 - L3 LINE CR1 -747 830 592 201 264 19 0 chr20 17413345 17413398 -54740484 + L2 LINE L2 3252 3305 -8 345 219 14 82 chr20 17413937 17413990 -54739892 + MER113 DNA MER1_type? 10 65 -456 1112 263 61 67 chr20 17413990 17414369 -54739513 + LTR16A LTR ERVL 5 382 -68 2316 72 10 7 chr20 17414369 17414676 -54739206 - AluY SINE Alu -3 308 1 1112 263 61 67 chr20 17414676 17414741 -54739141 + LTR16A LTR ERVL 382 446 -4 345 219 14 82 chr20 17414741 17414833 -54739049 + MER113 DNA MER1_type? 65 145 -376 791 299 123 68 chr20 17414848 17415561 -54738321 + L1MEd LINE L1 12 684 -5435 2219 105 0 7 chr20 17415561 17415856 -54738026 - AluSx SINE Alu -19 293 1 791 299 123 68 chr20 17415856 17416006 -54737876 + L1MEd LINE L1 684 824 -5295 1694 184 3 7 chr20 17416006 17416299 -54737583 + AluJo SINE Alu 19 310 -2 791 299 123 68 chr20 17416299 17416435 -54737447 + L1MEd LINE L1 824 1067 -5052 1188 272 81 42 chr20 17416448 17416929 -54736953 + L1MEd LINE L1 2161 2689 -3440 1923 148 50 0 chr20 17416929 17417226 -54736656 - AluSx SINE Alu 0 312 1 1188 272 81 42 chr20 17417226 17417560 -54736322 + L1MEd LINE L1 2689 3008 -3121 384 216 31 10 chr20 17417560 17417657 -54736225 - HsTC2 DNA Tc2 0 1898 1800 231 279 0 0 chr20 17417765 17417833 -54736049 + LTR16A1 LTR ERVL 296 363 -94 23 0 0 0 chr20 17418538 17418561 -54735321 + AT_rich Low_complexity Low_complexity 1 23 0 579 288 108 9 chr20 17418678 17418900 -54734982 - MIR SINE MIR 0 262 19 1925 130 4 0 chr20 17419241 17419511 -54734371 + AluSx SINE Alu 1 271 -41 41 21 0 0 chr20 17419862 17419910 -54733972 + AT_rich Low_complexity Low_complexity 1 48 0 252 100 0 0 chr20 17420103 17420143 -54733739 + (TG)n Simple_repeat Simple_repeat 1 40 0 2197 116 7 3 chr20 17420464 17420766 -54733116 - AluSx SINE Alu -9 303 1 2261 92 0 30 chr20 17420773 17421076 -54732806 - AluSg1 SINE Alu -15 294 1 303 301 73 44 chr20 17422090 17422296 -54731586 - MIR SINE MIR -50 212 1 395 222 37 35 chr20 17422374 17422537 -54731345 + MIR SINE MIR 29 261 -1 2010 141 30 7 chr20 17422622 17422926 -54730956 + AluSx SINE Alu 1 311 -1 457 283 48 24 chr20 17423156 17423322 -54730560 - MIR SINE MIR -3 259 90 2218 114 0 0 chr20 17423900 17424189 -54729693 - AluSx SINE Alu -23 289 1 219 69 0 0 chr20 17424528 17424557 -54729325 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 1058 242 29 8 chr20 17425968 17426208 -54727674 - MIR SINE MIR 0 262 18 203 279 151 35 chr20 17427631 17427717 -54726165 + MIR SINE MIR 13 108 -154 2364 102 3 0 chr20 17428116 17428420 -54725462 + AluSx SINE Alu 1 305 -7 235 333 0 0 chr20 17428605 17428665 -54725217 + L2 LINE L2 3175 3234 -38 188 232 98 61 chr20 17428712 17428794 -54725088 + MIR SINE MIR 164 248 -14 251 150 50 0 chr20 17428808 17428868 -54725014 + L1MA8 LINE L1 5988 6050 -241 230 336 0 17 chr20 17428933 17429052 -54724830 - L1MC/D LINE L1 -1878 5930 5814 21 0 0 0 chr20 17429060 17429081 -54724801 + AT_rich Low_complexity Low_complexity 1 21 0 228 309 0 37 chr20 17429570 17429651 -54724231 - L2 LINE L2 -188 3084 3007 305 246 80 4 chr20 17430464 17430587 -54723295 + MIR SINE MIR 20 160 -48 228 35 0 0 chr20 17430710 17430739 -54723143 + (GTTTG)n Simple_repeat Simple_repeat 2 30 0 1864 105 54 22 chr20 17430739 17431015 -54722867 - AluSx SINE Alu -27 285 1 242 132 19 0 chr20 17431573 17431626 -54722256 + GA-rich Low_complexity Low_complexity 1 54 0 2059 145 0 19 chr20 17432289 17432607 -54721275 + AluJb SINE Alu 1 312 0 1848 132 3 66 chr20 17432626 17432959 -54720923 + AluJb SINE Alu 1 312 0 578 27 27 0 chr20 17432963 17433038 -54720844 + (GAAA)n Simple_repeat Simple_repeat 2 78 0 1613 183 3 17 chr20 17433131 17433420 -54720462 - AluJb SINE Alu -17 295 11 2184 107 0 10 chr20 17433734 17434032 -54719850 + AluSx SINE Alu 1 295 -17 2229 127 0 3 chr20 17434537 17434851 -54719031 + AluSq SINE Alu 1 313 0 2288 86 10 16 chr20 17435099 17435403 -54718479 + AluY SINE Alu 1 302 -9 28 22 0 22 chr20 17436145 17436165 -54717717 + AT_rich Low_complexity Low_complexity 1 20 -25 2118 130 3 0 chr20 17436165 17436466 -54717416 - AluSx SINE Alu -10 302 1 28 22 0 22 chr20 17436466 17436491 -54717391 + AT_rich Low_complexity Low_complexity 20 45 0 371 289 206 44 chr20 17436693 17436873 -54717009 + L3 LINE CR1 426 634 -943 1804 116 8 15 chr20 17436886 17437145 -54716737 - AluSx SINE Alu -18 294 38 295 222 47 88 chr20 17437374 17437545 -54716337 + HAL1 LINE L1 2224 2387 -120 2167 100 3 13 chr20 17437576 17437877 -54716005 - AluSc SINE Alu -11 298 1 1293 208 81 75 chr20 17437999 17438480 -54715402 + L1MC5 LINE L1 6718 7201 -760 1692 178 0 7 chr20 17438481 17438750 -54715132 + MER66B LTR ERV1 2 268 -218 2336 85 0 19 chr20 17438750 17439066 -54714816 + AluSx SINE Alu 1 310 -2 339 281 176 36 chr20 17439209 17439343 -54714539 + L1M4 LINE L1 2907 3021 -3125 2625 55 0 0 chr20 17439343 17439654 -54714228 + AluY SINE Alu 1 311 0 339 281 176 36 chr20 17439654 17439740 -54714142 + L1M4 LINE L1 3021 3158 -2988 252 274 0 36 chr20 17440069 17440153 -54713729 - LTR58 LTR ERV1 -250 429 349 353 313 146 71 chr20 17440346 17440909 -54712973 + L1M4 LINE L1 3272 3876 -2270 829 180 14 95 chr20 17440962 17441173 -54712709 + MLT1A1 LTR MaLR 1 194 -171 318 241 46 11 chr20 17441174 17441261 -54712621 + L2 LINE L2 3179 3268 -4 413 284 184 27 chr20 17441275 17441606 -54712276 + L1M4 LINE L1 3877 4259 -1887 31 26 0 0 chr20 17441631 17441669 -54712213 + AT_rich Low_complexity Low_complexity 1 38 0 2274 107 3 0 chr20 17441671 17441979 -54711903 + AluSq SINE Alu 1 309 -4 181 330 209 27 chr20 17441981 17442239 -54711643 - L2 LINE L2 -556 2758 2454 540 275 101 31 chr20 17442267 17442525 -54711357 - HAL1 LINE L1 -1912 595 320 1471 141 8 31 chr20 17442542 17442751 -54711131 - L1M3 LINE L1 -491 5504 5301 180 0 0 0 chr20 17442751 17442771 -54711111 + (TG)n Simple_repeat Simple_repeat 2 21 0 1471 141 8 31 chr20 17442771 17442816 -54711066 - L1M3 LINE L1 -694 5301 5256 1224 109 0 6 chr20 17442818 17442993 -54710889 - AluSq SINE Alu -2 311 138 11950 197 36 45 chr20 17442995 17444215 -54709667 - L1M3 LINE L1 -726 5266 4036 2222 107 3 0 chr20 17444215 17444523 -54709359 - AluY SINE Alu -2 309 1 1906 162 0 7 chr20 17444525 17444822 -54709060 - AluSx SINE Alu -17 295 1 11950 197 36 45 chr20 17444822 17445245 -54708637 - L1M3 LINE L1 -1957 4035 3610 1848 167 3 16 chr20 17445245 17445551 -54708331 - AluJb SINE Alu -10 302 1 11950 197 36 45 chr20 17445551 17446127 -54707755 - L1M3 LINE L1 -2382 3610 3030 2056 149 0 0 chr20 17446127 17446435 -54707447 - AluSx SINE Alu -4 308 1 11950 197 36 45 chr20 17446435 17447382 -54706500 - L1M3 LINE L1 -2962 3030 2123 316 173 67 96 chr20 17447382 17447486 -54706396 - MER101 LTR ERV1 0 474 374 524 213 90 16 chr20 17447741 17447863 -54706019 - MER101B LTR ERV1 -439 131 1 3712 247 46 34 chr20 17447863 17448250 -54705632 - L1M3 LINE L1 -3844 2126 1745 1913 151 3 3 chr20 17448250 17448534 -54705348 - AluSx SINE Alu -17 295 12 3712 247 46 34 chr20 17448534 17449021 -54704861 - L1M3 LINE L1 -4225 1745 1266 2351 105 7 0 chr20 17449021 17449326 -54704556 - AluSc SINE Alu -2 307 1 3712 247 46 34 chr20 17449326 17450098 -54703784 - L1M3 LINE L1 -4704 1266 522 192 77 0 0 chr20 17450098 17450124 -54703758 + (TTG)n Simple_repeat Simple_repeat 2 27 0 3712 247 46 34 chr20 17450124 17450245 -54703637 - L1M3 LINE L1 -5448 522 404 511 289 69 67 chr20 17450399 17450790 -54703092 - L1M3 LINE L1 -5489 402 11 2553 66 0 0 chr20 17450899 17451203 -54702679 - AluY SINE Alu -7 304 1 2069 101 3 83 chr20 17451427 17451765 -54702117 + AluSq SINE Alu 1 311 -2 2280 91 0 25 chr20 17451767 17452086 -54701796 + AluY SINE Alu 1 311 0 275 335 70 19 chr20 17452391 17452549 -54701333 + MIR SINE MIR 85 250 -12 2161 128 0 0 chr20 17453811 17454107 -54699775 - AluSx SINE Alu -16 296 1 2468 67 0 7 chr20 17454662 17454959 -54698923 - AluY SINE Alu -16 295 1 27 0 0 0 chr20 17455796 17455823 -54698059 + AT_rich Low_complexity Low_complexity 1 27 0 2144 121 0 3 chr20 17455906 17456212 -54697670 + AluSg SINE Alu 1 305 -5 340 277 26 58 chr20 17457150 17457305 -54696577 - MIR SINE MIR -110 152 3 206 328 16 0 chr20 17457339 17457403 -54696479 + MIR3 SINE MIR 121 185 -23 2801 16 0 13 chr20 17457593 17457906 -54695976 + AluYa5 SINE Alu 1 309 -2 1657 190 93 75 chr20 17457916 17458414 -54695468 - MLT1H LTR MaLR -2 547 1 1017 105 24 4 chr20 17458577 17458589 -54695293 - L1MA6 LINE L1 -1 6299 6289 386 141 26 0 chr20 17458589 17458667 -54695215 - L1MA5 LINE L1 0 6300 6221 1017 105 24 4 chr20 17458667 17458846 -54695036 - L1MA6 LINE L1 -11 6289 6092 2325 97 0 0 chr20 17459401 17459690 -54694192 + AluSc SINE Alu 1 289 -20 370 235 183 13 chr20 17459879 17460032 -54693850 - MER104 DNA Tc2 0 180 2 423 38 0 0 chr20 17460059 17460112 -54693770 + (TGGA)n Simple_repeat Simple_repeat 2 54 0 246 268 56 0 chr20 17460520 17460591 -54693291 - MIR3 SINE MIR -3 205 131 229 352 11 0 chr20 17460606 17460694 -54693188 - L2 LINE L2 0 3272 3184 21 0 0 0 chr20 17461026 17461047 -54692835 + AT_rich Low_complexity Low_complexity 1 21 0 2038 133 0 3 chr20 17461065 17461350 -54692532 + AluSx SINE Alu 6 289 -23 25 0 0 0 chr20 17461350 17461375 -54692507 + AT_rich Low_complexity Low_complexity 1 25 0 1241 79 6 24 chr20 17462240 17462405 -54691477 + AluSg/x SINE Alu 135 296 -16 515 214 62 9 chr20 17463249 17463361 -54690521 + FLAM_A SINE Alu 2 119 -14 31 0 0 0 chr20 17463361 17463392 -54690490 + AT_rich Low_complexity Low_complexity 1 31 0 2371 94 0 3 chr20 17463588 17463895 -54689987 + AluSx SINE Alu 1 306 -6 183 205 0 0 chr20 17464286 17464325 -54689557 + A-rich Low_complexity Low_complexity 1 39 0 419 205 7 106 chr20 17464405 17464556 -54689326 - L1MB5 LINE L1 -2 6172 6037 639 222 20 0 chr20 17465156 17465309 -54688573 + MIR SINE MIR 9 164 -98 1286 154 0 0 chr20 17465309 17465491 -54688391 + AluJb SINE Alu 2 183 -129 234 175 0 0 chr20 17465506 17465546 -54688336 + MIR SINE MIR 201 240 -22 544 233 11 130 chr20 17467035 17467053 -54686829 + MER102b DNA MER1_type 103 122 -1306 2281 99 0 0 chr20 17467053 17467372 -54686510 + AluSc SINE Alu 1 319 0 544 233 11 130 chr20 17467372 17467422 -54686460 + MER102b DNA MER1_type 122 176 -1252 2108 136 3 3 chr20 17467422 17467731 -54686151 + AluSx SINE Alu 1 309 -3 544 233 11 130 chr20 17467731 17467930 -54685952 + MER102b DNA MER1_type 176 340 -1 220 302 0 0 chr20 17468055 17468108 -54685774 + CT-rich Low_complexity Low_complexity 2 54 0 2728 80 0 11 chr20 17468108 17468460 -54685422 - THE1C LTR MaLR 0 375 28 2219 124 0 0 chr20 17468901 17469200 -54684682 + AluSx SINE Alu 1 299 -13 249 252 8 106 chr20 17469619 17469742 -54684140 + L2 LINE L2 2976 3086 -186 2391 107 0 0 chr20 17469764 17470072 -54683810 - AluSx SINE Alu -4 308 1 22 35 0 0 chr20 17470962 17470991 -54682891 + AT_rich Low_complexity Low_complexity 1 29 0 2257 93 26 7 chr20 17471815 17472117 -54681765 + AluSg SINE Alu 1 308 -2 455 276 94 6 chr20 17473022 17473192 -54680690 - MIR SINE MIR -66 196 12 258 253 200 20 chr20 17473216 17473366 -54680516 - MIR3 SINE MIR -17 191 15 309 26 0 0 chr20 17474854 17474892 -54678990 + (CA)n Simple_repeat Simple_repeat 2 39 0 2279 98 0 22 chr20 17476711 17477027 -54676855 - AluSc SINE Alu 0 309 1 1934 146 0 31 chr20 17477716 17478044 -54675838 + AluJb SINE Alu 1 319 0 417 326 93 27 chr20 17478580 17478881 -54675001 - L2 LINE L2 -36 3277 2957 389 304 27 9 chr20 17478947 17479059 -54674823 - L2 LINE L2 -513 2801 2688 835 179 19 0 chr20 17479062 17479218 -54674664 + L1MB8 LINE L1 6015 6173 -5 231 64 43 21 chr20 17479219 17479266 -54674616 + (TA)n Simple_repeat Simple_repeat 2 49 0 1328 181 127 7 chr20 17479272 17479548 -54674334 + AluSg SINE Alu 1 309 -1 1314 255 126 82 chr20 17479548 17480636 -54673246 - L2 LINE L2 -618 2696 1561 2075 77 31 42 chr20 17480709 17481018 -54672864 + AluSq SINE Alu 1 306 0 422 323 3 28 chr20 17482133 17482328 -54671554 - MIR SINE MIR -35 227 37 1853 145 47 14 chr20 17484283 17484580 -54669302 + AluSx SINE Alu 1 307 -5 632 271 133 45 chr20 17484853 17485207 -54668675 + MLT1J2 LTR MaLR 64 448 -2 188 277 0 0 chr20 17485578 17485625 -54668257 + L2 LINE L2 3002 3048 -224 2392 92 3 0 chr20 17485638 17485941 -54667941 - AluSc SINE Alu -5 304 1 389 261 112 56 chr20 17486007 17486168 -54667714 - L2 LINE L2 0 3272 3103 646 272 107 49 chr20 17486917 17487160 -54666722 + MIR SINE MIR 5 261 -1 364 274 84 53 chr20 17487160 17487199 -54666683 + L1ME4a LINE L1 5790 5826 -295 1769 152 0 52 chr20 17487199 17487509 -54666373 + AluJb SINE Alu 1 294 -18 364 274 84 53 chr20 17487509 17487790 -54666092 + L1ME4a LINE L1 5826 6120 -1 402 291 134 0 chr20 17489236 17489408 -54664474 - L2 LINE L2 -1 3312 3118 1946 142 35 7 chr20 17489471 17489760 -54664122 - AluSx SINE Alu -15 297 1 1869 210 126 23 chr20 17489834 17490320 -54663562 - MLT1E2 LTR MaLR 0 626 91 1165 81 8 43 chr20 17492093 17492463 -54661419 + (TTC)n Simple_repeat Simple_repeat 1 356 0 2153 106 45 0 chr20 17492500 17492792 -54661090 - AluSx SINE Alu -7 305 1 437 270 47 0 chr20 17492794 17492942 -54660940 + MIR SINE MIR 101 255 -7 491 299 86 0 chr20 17493169 17493343 -54660539 + MIR SINE MIR 24 212 -50 1701 164 53 13 chr20 17494170 17494332 -54659550 - AluSx SINE Alu -1 311 157 2215 97 13 19 chr20 17494332 17494640 -54659242 - AluSc SINE Alu -3 306 1 1701 164 53 13 chr20 17494640 17494776 -54659106 - AluSx SINE Alu -155 157 1 2398 91 0 0 chr20 17494815 17495113 -54658769 + AluSc SINE Alu 7 304 -5 502 273 143 5 chr20 17495394 17495610 -54658272 - MIR SINE MIR -10 252 7 806 240 175 17 chr20 17495612 17496056 -54657826 - MLT1H1 LTR MaLR -1 554 1 303 28 0 0 chr20 17496315 17496351 -54657531 + (CA)n Simple_repeat Simple_repeat 2 37 0 798 189 0 0 chr20 17496873 17497005 -54656877 - FLAM_A SINE Alu -1 132 1 2322 99 3 7 chr20 17497412 17497716 -54656166 + AluSq SINE Alu 1 303 -10 890 220 192 81 chr20 17498023 17498528 -54655354 + MER34B LTR ERV1 5 565 0 1321 247 129 29 chr20 17498642 17498779 -54655103 - LTR16C LTR ERVL 0 491 369 1959 145 0 20 chr20 17498779 17499076 -54654806 + AluJo SINE Alu 1 291 -21 1321 247 129 29 chr20 17499076 17499380 -54654502 - LTR16C LTR ERVL -122 369 6 194 254 0 18 chr20 17499420 17499475 -54654407 - L2 LINE L2 -5 3267 3214 191 267 168 20 chr20 17499541 17499642 -54654240 - MIR SINE MIR -15 247 132 658 283 89 57 chr20 17500126 17500441 -54653441 - LTR16C LTR ERVL 0 491 167 1097 164 117 164 chr20 17500664 17501194 -54652688 + MLT1D LTR MaLR 1 505 0 2138 122 7 0 chr20 17502275 17502570 -54651312 - AluSx SINE Alu -15 297 1 382 276 109 13 chr20 17502869 17503025 -54650857 - MIR SINE MIR -86 176 6 2304 93 3 3 chr20 17503156 17503456 -54650426 - AluSg SINE Alu -10 300 1 1042 269 119 11 chr20 17503834 17504187 -54649695 + LTR16C LTR ERVL 99 489 -2 219 313 104 22 chr20 17504264 17504398 -54649484 + L2 LINE L2 3169 3313 0 2967 205 66 56 chr20 17504548 17505333 -54648549 - MER21B LTR ERV1 -52 811 19 426 206 0 72 chr20 17505353 17505450 -54648432 - MER21B LTR ERV1 -773 90 1 2266 100 0 3 chr20 17505586 17505875 -54648007 + AluSq SINE Alu 1 288 -25 1397 181 96 22 chr20 17506141 17506412 -54647470 + AluJo SINE Alu 5 295 -17 521 272 76 17 chr20 17507183 17507473 -54646409 + L1ME4a LINE L1 5627 5933 -188 1797 218 57 11 chr20 17507587 17508065 -54645817 + L1M4 LINE L1 2184 2683 -3463 3225 168 35 10 chr20 17508070 17508671 -54645211 + L1MB7 LINE L1 5569 6184 0 508 267 76 82 chr20 17508894 17509235 -54644647 + MLT1I LTR MaLR 71 409 0 321 216 235 39 chr20 17509595 17509748 -54644134 - MIR SINE MIR -9 253 71 401 218 8 81 chr20 17509927 17510051 -54643831 - L2 LINE L2 -1 3312 3198 328 267 0 0 chr20 17510094 17510169 -54643713 + L1ME4a LINE L1 5579 5653 -468 557 246 221 9 chr20 17510182 17510512 -54643370 + L1ME4a LINE L1 5711 6110 -11 995 164 12 18 chr20 17510565 17510736 -54643146 - FRAM SINE Alu -9 167 1 206 301 168 31 chr20 17510852 17511048 -54642834 + L2 LINE L2 2458 2698 -616 2041 148 3 0 chr20 17511048 17511352 -54642530 - AluSx SINE Alu -7 305 1 206 301 168 31 chr20 17511352 17511411 -54642471 + L2 LINE L2 2698 2748 -566 862 180 0 36 chr20 17511411 17511578 -54642304 + FRAM SINE Alu 1 157 -19 287 297 90 9 chr20 17511631 17511742 -54642140 - LTR16C LTR ERVL 0 491 372 268 326 12 23 chr20 17511841 17511927 -54641955 - MER5A DNA MER1_type -1 188 104 2149 143 0 0 chr20 17512072 17512379 -54641503 - AluSc SINE Alu 0 309 3 2064 111 3 36 chr20 17512383 17512690 -54641192 - AluSx SINE Alu -15 297 1 363 60 0 0 chr20 17512737 17512787 -54641095 + (CA)n Simple_repeat Simple_repeat 2 51 0 286 115 16 98 chr20 17513063 17513124 -54640758 + MIR SINE MIR 183 238 -24 193 219 0 24 chr20 17513091 17513132 -54640750 + L2 LINE L2 3210 3249 -23 * 451 202 11 0 chr20 17513147 17513236 -54640646 + HsTC2 DNA Tc2 4 93 -1805 183 241 145 36 chr20 17513519 17513602 -54640280 + L2 LINE L2 3207 3298 -15 233 290 269 0 chr20 17513652 17513745 -54640137 + L2 LINE L2 3150 3267 -5 332 155 239 0 chr20 17513987 17514058 -54639824 + MER5B DNA MER1_type 43 130 -48 280 252 170 27 chr20 17514313 17514460 -54639422 + MIR3 SINE MIR 33 200 -8 367 180 90 22 chr20 17515019 17515108 -54638774 - MIR SINE MIR 0 262 168 1152 98 0 13 chr20 17515132 17515285 -54638597 - AluSg/x SINE Alu -17 293 143 347 137 0 0 chr20 17515286 17515337 -54638545 - Alu SINE Alu -251 51 1 341 167 152 0 chr20 17515338 17515404 -54638478 - MIR SINE MIR -112 150 75 250 275 73 28 chr20 17515918 17516027 -54637855 - MIR SINE MIR -147 115 2 467 193 114 54 chr20 17516847 17517013 -54636869 + MIR SINE MIR 65 240 -22 2120 118 7 0 chr20 17517399 17517696 -54636186 + AluSx SINE Alu 1 299 -13 290 186 0 17 chr20 17517706 17517765 -54636117 + AluSp SINE Alu 136 193 -110 404 211 114 60 chr20 17518133 17518299 -54635583 - MIR3 SINE MIR -16 192 18 2588 171 141 2 chr20 17519083 17519580 -54634302 - MLT1F1 LTR MaLR -1 566 1 1909 149 17 3 chr20 17520005 17520301 -54633581 - AluJb SINE Alu -12 300 1 2194 92 3 14 chr20 17521046 17521371 -54632511 + AluSc SINE Alu 1 309 0 796 154 132 0 chr20 17522063 17522199 -54631683 - FRAM SINE Alu -12 154 1 198 292 283 0 chr20 17525334 17525447 -54628435 + MIR3 SINE MIR 50 194 -14 243 280 88 48 chr20 17525828 17525953 -54627929 + MIR SINE MIR 16 145 -63 422 271 49 41 chr20 17526508 17526630 -54627252 + MIR SINE MIR 9 131 -131 253 229 208 42 chr20 17527144 17527240 -54626642 + L2 LINE L2 3182 3293 -20 2245 110 0 0 chr20 17527473 17527765 -54626117 + AluSx SINE Alu 11 302 -10 462 223 133 48 chr20 17527765 17527931 -54625951 + L1ME3 LINE L1 5983 6162 0 375 227 45 0 chr20 17527992 17528080 -54625802 + MIR SINE MIR 83 174 -88 2355 323 143 35 chr20 17528950 17531379 -54622503 + L2 LINE L2 365 3067 -205 182 317 98 12 chr20 17531388 17531470 -54622412 + L2 LINE L2 1103 1191 -2123 328 267 86 35 chr20 17531614 17531730 -54622152 + L2 LINE L2 3136 3257 -15 307 306 195 32 chr20 17531913 17532293 -54621589 - L3 LINE CR1 -9 1568 1066 1958 133 0 23 chr20 17532750 17533051 -54620831 - AluSg SINE Alu -16 294 1 356 303 51 6 chr20 17533058 17533236 -54620646 + L1MC4a LINE L1 5725 5910 -1898 2276 104 0 0 chr20 17533367 17533665 -54620217 + AluY SINE Alu 1 298 -13 843 168 0 0 chr20 17533667 17533804 -54620078 + AluSg/x SINE Alu 135 271 -39 225 373 106 47 chr20 17534021 17534178 -54619704 - L3 LINE CR1 -985 592 415 2148 104 0 29 chr20 17534178 17534487 -54619395 - AluY SINE Alu -11 300 1 225 373 106 47 chr20 17534487 17534565 -54619317 - L3 LINE CR1 -1162 415 343 1527 161 61 18 chr20 17534777 17535056 -54618826 - AluJb SINE Alu -21 291 1 22 0 0 0 chr20 17535202 17535224 -54618658 + AT_rich Low_complexity Low_complexity 1 22 0 475 227 31 0 chr20 17535903 17536000 -54617882 + L2 LINE L2 3213 3312 -1 458 243 62 43 chr20 17536000 17536334 -54617548 + L1ME4a LINE L1 5670 6017 -104 1919 196 63 36 chr20 17536335 17536627 -54617255 + Charlie1b DNA MER1_type 1 314 -2447 2087 127 0 19 chr20 17536627 17536934 -54616948 + AluSx SINE Alu 1 301 -11 1919 196 63 36 chr20 17536934 17537145 -54616737 + Charlie1b DNA MER1_type 314 518 -5 2322 102 0 7 chr20 17538022 17538326 -54615556 - AluSq SINE Alu -11 302 1 32 26 0 0 chr20 17539258 17539297 -54614585 + AT_rich Low_complexity Low_complexity 1 39 0 1817 225 105 21 chr20 17539555 17540040 -54613842 + MLT1H LTR MaLR 15 540 -9 2357 105 0 0 chr20 17540992 17541296 -54612586 - AluSx SINE Alu -8 304 1 206 314 166 31 chr20 17541438 17541667 -54612215 + L2 LINE L2 2716 2975 -339 5482 122 54 18 chr20 17542789 17543666 -54610216 - L1MC1 LINE L1 0 6333 5426 2128 123 7 0 chr20 17543722 17544014 -54609868 - AluSx SINE Alu -16 296 3 361 194 28 0 chr20 17544502 17544574 -54609308 + MER81 DNA DNA 41 114 0 1914 161 0 0 chr20 17544890 17545176 -54608706 - AluJb SINE Alu -26 286 1 1099 121 0 13 chr20 17545545 17545702 -54608180 - AluSx SINE Alu -157 155 1 2312 93 10 0 chr20 17546134 17546436 -54607446 + AluSx SINE Alu 1 305 -7 390 244 165 25 chr20 17546522 17546764 -54607118 + L1ME LINE L1 5093 5368 -778 468 289 64 45 chr20 17546876 17547142 -54606740 + L1ME LINE L1 5554 5824 -297 266 231 29 96 chr20 17547263 17547367 -54606515 + L1ME4a LINE L1 1210 6069 -42 421 182 159 0 chr20 17548441 17548529 -54605353 + MER63A DNA MER1_type 109 210 0 796 222 7 0 chr20 17548687 17548831 -54605051 + MER63A DNA MER1_type 57 201 -9 505 214 151 38 chr20 17549317 17549476 -54604406 - MIR SINE MIR -70 192 16 1342 269 137 27 chr20 17549734 17550399 -54603483 - L2 LINE L2 -129 3184 2416 223 330 86 34 chr20 17550407 17550616 -54603266 + L2 LINE L2 2489 2708 -606 2441 77 0 3 chr20 17550937 17551237 -54602645 + AluY SINE Alu 1 299 -12 2181 118 0 0 chr20 17551248 17551545 -54602337 + AluSx SINE Alu 1 297 -15 191 286 104 13 chr20 17552589 17552666 -54601216 - L2 LINE L2 -15 3257 3174 * 267 367 18 0 chr20 17552638 17552747 -54601135 - MIR SINE MIR -151 111 1 183 80 0 0 chr20 17553622 17553647 -54600235 + (CA)n Simple_repeat Simple_repeat 2 26 0 415 192 222 48 chr20 17554682 17554749 -54599133 + L2 LINE L2 2692 2746 -568 1489 122 52 67 chr20 17554749 17555078 -54598804 - MER33 DNA MER1_type 0 324 1 415 192 222 48 chr20 17555078 17555177 -54598705 + L2 LINE L2 2746 2887 -427 32 0 0 0 chr20 17555386 17555418 -54598464 + GC_rich Low_complexity Low_complexity 1 32 0 206 297 0 16 chr20 17556264 17556328 -54597554 + MIR SINE MIR 153 215 -47 1622 140 63 7 chr20 17556877 17557163 -54596719 - AluJb SINE Alu -10 302 1 2254 109 0 3 chr20 17558535 17558837 -54595045 + AluSx SINE Alu 1 301 -11 422 290 70 0 chr20 17558972 17559072 -54594810 - MER91A DNA MER1_type 0 196 90 * 488 327 74 0 chr20 17559071 17559233 -54594649 - MER91A DNA MER1_type -20 176 3 1002 149 129 37 chr20 17559261 17559533 -54594349 - MER33 DNA MER1_type -34 290 1 232 220 237 0 chr20 17560498 17560557 -54593325 - MIR SINE MIR -100 108 36 257 217 145 0 chr20 17560769 17560838 -54593044 + L1ME LINE L1 5603 5681 -440 2178 133 0 0 chr20 17560878 17561178 -54592704 + AluSx SINE Alu 1 300 -12 1874 153 10 7 chr20 17561648 17561948 -54591934 - AluJb SINE Alu -11 301 1 252 222 19 0 chr20 17562057 17562111 -54591771 - MER113 DNA MER1_type? -8 513 459 22 35 0 0 chr20 17562221 17562250 -54591632 + AT_rich Low_complexity Low_complexity 1 29 0 248 298 0 0 chr20 17562742 17562799 -54591083 + L2 LINE L2 3214 3270 -2 670 333 91 37 chr20 17563143 17563659 -54590223 + L2 LINE L2 2181 2724 -590 268 398 46 54 chr20 17563831 17564180 -54589702 + L2 LINE L2 2913 3258 -14 216 219 0 0 chr20 17564605 17564687 -54589195 + (ATG)n Simple_repeat Simple_repeat 2 83 0 226 264 11 23 chr20 17565698 17565785 -54588097 + L1M4 LINE L1 4163 4248 -1898 421 291 89 57 chr20 17566016 17566255 -54587627 + MIR SINE MIR 8 257 -5 952 122 176 29 chr20 17566255 17566460 -54587422 - MER46A DNA MER2_type -1 235 1 2632 31 0 0 chr20 17566605 17566899 -54586983 - AluY SINE Alu -17 294 1 323 172 0 16 chr20 17566952 17567016 -54586866 + U2 snRNA snRNA 2 64 -124 186 43 0 0 chr20 17568780 17568803 -54585079 + (A)n Simple_repeat Simple_repeat 1 23 0 268 240 0 0 chr20 17569744 17569794 -54584088 + MER3 DNA MER1_type 41 90 -119 264 216 0 0 chr20 17569755 17569806 -54584076 - MER3 DNA MER1_type -4 205 155 * 404 169 0 0 chr20 17569844 17569909 -54583973 - MER3 DNA MER1_type -144 65 1 1473 162 101 25 chr20 17570065 17570343 -54583539 + AluJo SINE Alu 1 299 -13 21 0 0 0 chr20 17570657 17570678 -54583204 + AT_rich Low_complexity Low_complexity 1 21 0 1972 141 10 10 chr20 17570904 17571208 -54582674 - AluSx SINE Alu -8 304 1 2312 99 0 3 chr20 17571784 17572097 -54581785 - AluSx SINE Alu 0 312 1 1873 121 4 0 chr20 17572106 17572371 -54581511 - AluSx SINE Alu -6 306 41 1917 100 43 50 chr20 17573166 17573467 -54580415 - AluSq SINE Alu -14 299 1 21 0 0 0 chr20 17574063 17574084 -54579798 + AT_rich Low_complexity Low_complexity 1 21 0 693 279 77 16 chr20 17574329 17574759 -54579123 - L1MEd LINE L1 -4868 1251 896 2052 136 0 0 chr20 17575477 17575771 -54578111 - AluSx SINE Alu -18 294 1 2106 181 35 24 chr20 17575833 17576258 -54577624 + Tigger2a DNA MER2_type 5 434 0 254 266 242 8 chr20 17577362 17577490 -54576392 + MIR SINE MIR 17 174 -88 2544 59 0 3 chr20 17577551 17577857 -54576025 + AluY SINE Alu 1 305 -6 24 32 0 0 chr20 17578597 17578628 -54575254 + AT_rich Low_complexity Low_complexity 1 31 0 25 31 0 0 chr20 17579283 17579315 -54574567 + AT_rich Low_complexity Low_complexity 1 32 0 7314 73 8 18 chr20 17579315 17580538 -54573344 - SVA Other Other -683 1385 432 1530 140 137 33 chr20 17581564 17581871 -54572011 + MER44D DNA MER2_type 1 609 0 711 329 37 40 chr20 17582371 17582693 -54571189 + L3 LINE CR1 1171 1491 -86 1790 147 0 21 chr20 17583010 17583315 -54570567 + AluJb SINE Alu 3 301 0 534 267 68 6 chr20 17583396 17583572 -54570310 - L1M4 LINE L1 -2329 3817 3631 673 286 33 9 chr20 17584102 17584365 -54569517 - L1MC/D LINE L1 -441 5680 5423 247 269 0 15 chr20 17584496 17584563 -54569319 + MIR SINE MIR 106 171 -91 25 102 0 0 chr20 17585012 17585100 -54568782 + AT_rich Low_complexity Low_complexity 1 88 0 482 276 83 0 chr20 17585527 17585672 -54568210 - L2 LINE L2 -1 3312 3156 1660 272 331 11 chr20 17585729 17586633 -54567249 - L2 LINE L2 -340 2974 1782 1383 279 153 65 chr20 17586755 17586789 -54567093 - L2 LINE L2 -2387 927 897 783 44 195 0 chr20 17586789 17586902 -54566980 - MER85 DNA T2_type -4 135 1 1383 279 153 65 chr20 17586902 17587718 -54566164 - L2 LINE L2 -2417 897 2 271 293 49 12 chr20 17588353 17588435 -54565447 - MIR SINE MIR -132 130 46 1995 101 40 3 chr20 17588694 17588990 -54564892 - AluSc SINE Alu -2 307 1 1410 201 44 17 chr20 17589722 17590015 -54563867 - AluJo SINE Alu -11 301 1 2214 117 0 0 chr20 17590180 17590489 -54563393 - AluSx SINE Alu -3 309 1 2254 98 0 10 chr20 17590845 17591150 -54562732 + AluSx SINE Alu 1 302 -10 1550 114 107 75 chr20 17591357 17591637 -54562245 + AluSg SINE Alu 1 289 -21 2182 75 10 10 chr20 17591825 17592119 -54561763 + AluY SINE Alu 1 294 -17 1011 161 0 0 chr20 17592119 17592299 -54561583 + (TA)n Simple_repeat Simple_repeat 1 180 0 352 310 203 6 chr20 17592338 17592496 -54561386 - MIR SINE MIR -12 250 62 1556 124 19 112 chr20 17592577 17592899 -54560983 + MER7A DNA MER2_type 1 290 -56 627 184 50 35 chr20 17592899 17593040 -54560842 + Tigger3(Golem) DNA MER2_type 2895 3037 0 1992 97 0 103 chr20 17593094 17593433 -54560449 - AluSc SINE Alu -5 304 1 1987 153 0 7 chr20 17594447 17594748 -54559134 + AluSx SINE Alu 1 299 -13 521 282 121 46 chr20 17594880 17594960 -54558922 - L1ME3 LINE L1 -212 5950 5877 2108 139 0 0 chr20 17594960 17595261 -54558621 + AluSx SINE Alu 1 301 -11 521 282 121 46 chr20 17595261 17595683 -54558199 - L1ME3 LINE L1 -285 5877 5410 1248 240 74 45 chr20 17595683 17596279 -54557603 - L2 LINE L2 -23 3290 2685 423 259 63 0 chr20 17596342 17596485 -54557397 - L1ME3 LINE L1 -833 5313 5162 4089 139 57 6 chr20 17596802 17597616 -54556266 - L1MA9 LINE L1 -22 6290 5339 1186 142 182 0 chr20 17597659 17597906 -54555976 + L1MB8 LINE L1 5812 6103 -75 480 290 174 15 chr20 17597965 17598224 -54555658 - L1ME3A LINE L1 -273 5880 5581 1707 112 124 11 chr20 17598224 17598491 -54555391 - AluSg SINE Alu -13 297 1 971 135 0 0 chr20 17598494 17598627 -54555255 - AluSq/x SINE Alu -179 133 1 483 288 120 24 chr20 17598684 17599283 -54554599 - L1ME3A LINE L1 -770 5359 4750 994 268 81 65 chr20 17599317 17599750 -54554132 - L2 LINE L2 -2848 466 27 671 252 75 32 chr20 17600032 17600310 -54553572 - L1ME3A LINE L1 -4863 1256 967 522 285 107 33 chr20 17600435 17600677 -54553205 - L1ME3A LINE L1 -5403 716 457 414 270 25 88 chr20 17601865 17602069 -54551813 - L2 LINE L2 -5 3308 3118 2012 141 3 7 chr20 17602097 17602394 -54551488 + AluJb SINE Alu 1 296 -16 2233 96 3 10 chr20 17602756 17603049 -54550833 + AluSx SINE Alu 1 291 -21 22 0 0 0 chr20 17603350 17603372 -54550510 + AT_rich Low_complexity Low_complexity 1 22 0 225 318 0 32 chr20 17604129 17604192 -54549690 - L2 LINE L2 -10 3303 3243 1086 203 63 5 chr20 17604367 17604574 -54549308 + MER20 DNA MER1_type 1 219 0 248 229 0 0 chr20 17605622 17605670 -54548212 - MIR3 SINE MIR -49 159 112 200 98 73 0 chr20 17606619 17606660 -54547222 + (GTTTG)n Simple_repeat Simple_repeat 3 46 0 332 332 96 11 chr20 17607002 17607189 -54546693 - MIR SINE MIR 0 262 60 2062 125 4 0 chr20 17607486 17607808 -54546074 + AluSx SINE Alu 1 323 0 331 289 139 50 chr20 17608006 17608186 -54545696 - MIR3 SINE MIR -9 199 4 3106 128 74 25 chr20 17608348 17608878 -54545004 - MER21A LTR ERV1 0 931 376 490 190 116 3 chr20 17608883 17609067 -54544815 - MER21A LTR ERV1 -667 264 2 2263 48 0 4 chr20 17609157 17609428 -54544454 - AluY SINE Alu -7 304 35 2402 77 0 3 chr20 17610028 17610326 -54543556 + AluY SINE Alu 1 297 -14 2244 98 0 7 chr20 17610338 17610633 -54543249 + AluSq SINE Alu 1 293 -20 244 214 205 27 chr20 17610945 17611057 -54542825 + L1MC5 LINE L1 7795 7926 -35 253 268 85 98 chr20 17611167 17611432 -54542450 + L2 LINE L2 3023 3285 -28 2163 119 7 0 chr20 17611432 17611735 -54542147 - AluSx SINE Alu -7 305 1 253 268 85 98 chr20 17611735 17611764 -54542118 + L2 LINE L2 3285 3313 0 2253 109 0 13 chr20 17611815 17612127 -54541755 - AluSg SINE Alu -2 308 1 324 0 0 0 chr20 17613843 17613879 -54540003 + (TTTTG)n Simple_repeat Simple_repeat 1 36 0 1384 315 167 14 chr20 17613952 17615428 -54538454 - L2 LINE L2 -1 3312 1606 2322 105 0 3 chr20 17616387 17616700 -54537182 - AluSx SINE Alu 0 312 1 1661 154 39 51 chr20 17617833 17618144 -54535738 - AluJo SINE Alu -5 307 1 377 382 100 13 chr20 17619142 17619443 -54534439 + L2 LINE L2 2945 3271 -1 2255 108 0 7 chr20 17619568 17619873 -54534009 - AluSx SINE Alu -9 303 1 279 269 47 0 chr20 17620191 17620329 -54533553 - L1MC5 LINE L1 -395 7413 7272 328 333 16 40 chr20 17620940 17621189 -54532693 - L1M4 LINE L1 -1023 5123 4881 315 161 42 169 chr20 17621371 17621489 -54532393 - L1M4 LINE L1 -2192 3954 3852 309 289 74 59 chr20 17621465 17621721 -54532161 - L1M4 LINE L1 -1543 4603 4344 * 2118 122 0 28 chr20 17623452 17623595 -54530287 + AluJb SINE Alu 1 146 -166 2565 74 0 0 chr20 17623595 17623906 -54529976 + AluY SINE Alu 1 311 0 2118 122 0 28 chr20 17623906 17624083 -54529799 + AluJb SINE Alu 146 312 0 32 26 0 0 chr20 17625495 17625534 -54528348 + AT_rich Low_complexity Low_complexity 1 39 0 22 0 0 0 chr20 17626070 17626092 -54527790 + AT_rich Low_complexity Low_complexity 1 22 0 23 54 0 0 chr20 17626201 17626238 -54527644 + AT_rich Low_complexity Low_complexity 1 37 0 23 33 0 0 chr20 17626258 17626288 -54527594 + AT_rich Low_complexity Low_complexity 1 30 0 1442 174 9 114 chr20 17626894 17627007 -54526875 + AluJo SINE Alu 1 124 -188 1876 140 11 11 chr20 17627007 17627293 -54526589 + AluSx SINE Alu 1 286 -26 1442 174 9 114 chr20 17627293 17627513 -54526369 + AluJo SINE Alu 124 299 -13 669 244 23 35 chr20 17628522 17628628 -54525254 + MER5B DNA MER1_type 8 113 -65 2096 99 13 30 chr20 17628628 17628930 -54524952 - AluSx SINE Alu -15 297 1 669 244 23 35 chr20 17628930 17628995 -54524887 + MER5B DNA MER1_type 113 177 -1 356 240 53 45 chr20 17629086 17629240 -54524642 - MLT1H LTR MaLR -2 583 430 265 232 142 65 chr20 17629257 17629412 -54524470 - MLT1H LTR MaLR -257 292 126 1842 197 87 47 chr20 17629567 17630432 -54523450 - L1ME LINE L1 -429 5737 4845 1235 215 45 77 chr20 17630431 17630990 -54522892 + L1MD2 LINE L1 3419 3959 -2187 * 824 104 0 0 chr20 17630993 17631099 -54522783 + AluSq/x SINE Alu 1 106 -207 1520 119 5 0 chr20 17631105 17631327 -54522555 + AluSg/x SINE Alu 79 301 0 1325 226 33 33 chr20 17631331 17631616 -54522266 + L1MD2 LINE L1 3959 4246 -1900 2267 92 27 3 chr20 17631616 17631909 -54521973 + AluSq SINE Alu 2 301 -12 1325 226 33 33 chr20 17631909 17632012 -54521870 + L1MD2 LINE L1 4245 4347 -1799 3642 197 21 15 chr20 17632012 17632818 -54521064 + L1MD2 LINE L1 5547 6357 -2 701 216 0 0 chr20 17632822 17632938 -54520944 + FLAM_C SINE Alu 2 117 -16 11056 52 5 12 chr20 17632943 17635155 -54518727 - L1PA6 LINE L1 0 6154 3961 659 170 191 0 chr20 17635172 17635319 -54518563 + FRAM SINE Alu 1 169 -7 3875 231 49 63 chr20 17635331 17636060 -54517822 - L1ME LINE L1 -1306 4840 4102 257 83 0 0 chr20 17636060 17636096 -54517786 - U2 snRNA snRNA -152 36 1 3875 231 49 63 chr20 17636096 17636652 -54517230 - L1ME LINE L1 -2044 4102 3541 2233 121 3 0 chr20 17636652 17636949 -54516933 - AluSx SINE Alu -14 298 1 3875 231 49 63 chr20 17636949 17637125 -54516757 - L1ME LINE L1 -2605 3541 3364 413 118 0 26 chr20 17637238 17637314 -54516568 - SVA Other Other -862 524 451 499 228 16 11 chr20 17637322 17637511 -54516371 - L1ME LINE L1 -2793 3353 3164 761 206 23 139 chr20 17637544 17637889 -54515993 + LTR41 LTR ERVL 463 767 -6 588 237 348 27 chr20 17638060 17638294 -54515588 - MLT1G1 LTR MaLR -34 561 403 2255 108 0 3 chr20 17638294 17638589 -54515293 - AluSq SINE Alu -19 294 1 588 237 348 27 chr20 17638589 17638725 -54515157 - MLT1G1 LTR MaLR -192 403 72 664 291 115 62 chr20 17639029 17639497 -54514385 + MLT1J LTR MaLR 18 510 -1 476 16 0 16 chr20 17640128 17640190 -54513692 + MSTB2 LTR MaLR 15 75 -382 22 56 0 0 chr20 17640330 17640366 -54513516 + AT_rich Low_complexity Low_complexity 1 36 0 2178 104 0 13 chr20 17640589 17640896 -54512986 + AluSx SINE Alu 1 303 -9 244 95 24 0 chr20 17640973 17641015 -54512867 - MLT1K LTR MaLR -22 566 524 1817 162 24 0 chr20 17641307 17641603 -54512279 + AluJo SINE Alu 1 303 -9 597 296 66 12 chr20 17642320 17642577 -54511305 + L1MC4 LINE L1 7642 7912 -130 1646 151 21 42 chr20 17642584 17642868 -54511014 + AluJo SINE Alu 34 311 -1 30 45 0 0 chr20 17642947 17642991 -54510891 + AT_rich Low_complexity Low_complexity 1 44 0 648 258 145 33 chr20 17643988 17644353 -54509529 + MLT1I LTR MaLR 4 409 0 652 297 11 11 chr20 17644743 17644928 -54508954 + MIR SINE MIR 7 191 -71 2202 116 3 3 chr20 17646545 17646848 -54507034 + AluSq SINE Alu 1 303 -10 825 234 20 5 chr20 17647347 17647548 -54506334 + MER63A DNA MER1_type 7 210 0 414 221 77 0 chr20 17647551 17647655 -54506227 - MER115 DNA AcHobo -29 664 553 566 92 11 0 chr20 17647656 17647743 -54506139 - MSTB LTR MaLR 0 432 345 1484 193 43 15 chr20 17647914 17648241 -54505641 - MSTB LTR MaLR -90 336 1 295 80 21 0 chr20 17648281 17648323 -54505559 - MLT2B1 LTR ERVL 0 520 480 216 0 0 0 chr20 17648323 17648347 -54505535 + (TG)n Simple_repeat Simple_repeat 2 25 0 2117 90 7 0 chr20 17648381 17648696 -54505186 - AluSg SINE Alu 0 319 3 348 159 0 4 chr20 17648702 17648773 -54505109 - Alu SINE Alu -255 53 1 426 227 21 43 chr20 17649017 17649158 -54504724 - L1ME LINE L1 -433 5737 5600 327 335 26 9 chr20 17649911 17650042 -54503840 - MIR SINE MIR -63 145 30 447 278 0 80 chr20 17651030 17651206 -54502676 + MLT1K LTR MaLR 100 261 -327 2204 137 6 6 chr20 17651399 17651736 -54502146 - MER1B DNA MER1_type 0 337 1 307 223 10 10 chr20 17651759 17651862 -54502020 + CT-rich Low_complexity Low_complexity 2 104 0 354 183 151 11 chr20 17652867 17652960 -54500922 - MLT1K LTR MaLR 0 588 483 2325 131 54 47 chr20 17653043 17653156 -54500726 + L1MB5 LINE L1 5695 5806 -368 2438 103 0 0 chr20 17653156 17653466 -54500416 + AluSx SINE Alu 1 310 -2 2353 87 7 0 chr20 17653466 17653764 -54500118 + AluSx SINE Alu 1 300 -12 2325 131 54 47 chr20 17653764 17654114 -54499768 + L1MB5 LINE L1 5805 6162 -12 1976 121 55 21 chr20 17654141 17654430 -54499452 - AluSx SINE Alu -13 299 1 520 196 0 26 chr20 17654510 17654657 -54499225 - L1MC5 LINE L1 0 8042 7832 685 199 10 2 chr20 17654657 17655069 -54498813 + CT-rich Low_complexity Low_complexity 1 414 0 182 224 0 13 chr20 17655074 17655150 -54498732 + (TA)n Simple_repeat Simple_repeat 2 76 0 1240 170 142 42 chr20 17655247 17655577 -54498305 + MLT1A1 LTR MaLR 1 363 -2 927 277 64 17 chr20 17656518 17656814 -54497068 - LTR16C LTR ERVL -4 487 178 201 263 47 53 chr20 17656958 17657052 -54496830 - MIR SINE MIR -65 143 76 298 200 29 0 chr20 17657062 17657132 -54496750 - MLT1K LTR MaLR -36 552 481 1414 199 39 19 chr20 17657134 17657441 -54496441 - MSTD LTR MaLR 0 396 84 893 112 8 0 chr20 17657451 17657576 -54496306 + AluSg/x SINE Alu 173 298 -14 2409 109 0 0 chr20 17657624 17657937 -54495945 - AluSq SINE Alu 0 313 1 234 180 80 0 chr20 17657937 17657987 -54495895 - MSTD LTR MaLR -374 54 1 2116 111 7 0 chr20 17658153 17658453 -54495429 + AluSx SINE Alu 1 302 0 1564 167 40 11 chr20 17658471 17658746 -54495136 + AluJo SINE Alu 17 299 -13 41 48 0 0 chr20 17658776 17658838 -54495044 + AT_rich Low_complexity Low_complexity 1 62 0 2594 78 0 0 chr20 17659427 17659736 -54494146 + AluSc SINE Alu 1 309 0 847 282 84 3 chr20 17659767 17660065 -54493817 - LTR16A LTR ERVL -6 444 123 186 246 72 43 chr20 17660097 17660166 -54493716 + L2 LINE L2 2260 2330 -984 2414 50 0 13 chr20 17660466 17660764 -54493118 - AluY SINE Alu -17 294 1 431 278 63 40 chr20 17661105 17661288 -54492594 + MIR3 SINE MIR 1 184 -24 584 258 32 32 chr20 17661745 17661935 -54491947 - MLT1K LTR MaLR -8 580 391 324 286 36 0 chr20 17661941 17662025 -54491857 - L2 LINE L2 0 3313 3227 974 256 101 19 chr20 17662105 17662506 -54491376 - L2 LINE L2 -103 3210 2253 446 271 184 31 chr20 17662585 17662840 -54491042 - MLT1K LTR MaLR -280 308 15 528 223 108 68 chr20 17663101 17663345 -54490537 - MLT1F LTR MaLR 0 549 316 2308 107 10 0 chr20 17663345 17663655 -54490227 - AluSp SINE Alu 0 313 1 528 223 108 68 chr20 17663655 17663890 -54489992 - MLT1F LTR MaLR -233 316 1 283 249 111 142 chr20 17664115 17664174 -54489708 - LTR16C LTR ERVL -1 490 431 1559 150 26 19 chr20 17664174 17664441 -54489441 - AluJb SINE Alu -21 291 23 283 249 111 142 chr20 17664441 17664457 -54489425 - LTR16C LTR ERVL -60 431 416 1843 171 10 0 chr20 17664457 17664755 -54489127 - AluJb SINE Alu -11 301 1 2155 121 0 3 chr20 17664760 17665057 -54488825 - AluSx SINE Alu -14 298 3 283 249 111 142 chr20 17665057 17665227 -54488655 - LTR16C LTR ERVL -79 412 246 1156 89 11 11 chr20 17665231 17665307 -54488575 + (TTTC)n Simple_repeat Simple_repeat 1 256 0 1156 89 11 11 chr20 17665307 17665487 -54488395 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 2177 111 3 10 chr20 17665523 17665829 -54488053 - AluSq SINE Alu 0 313 10 2351 115 70 50 chr20 17666449 17666656 -54487226 - THE1B LTR MaLR 0 364 146 2535 69 0 0 chr20 17666656 17666961 -54486921 + AluY SINE Alu 1 305 -6 2351 115 70 50 chr20 17666961 17667110 -54486772 - THE1B LTR MaLR -218 146 1 472 293 118 24 chr20 17667270 17667482 -54486400 + MLT1K LTR MaLR 315 546 -42 1233 241 21 45 chr20 17667759 17668140 -54485742 + L1MC4a LINE L1 7435 7806 -2 271 205 39 0 chr20 17669346 17669424 -54484458 + GA-rich Low_complexity Low_complexity 3 83 0 8301 159 35 54 chr20 17669700 17670728 -54483154 + L1MCa LINE L1 7 1052 -5374 2078 110 0 11 chr20 17670728 17671009 -54482873 + AluSq SINE Alu 1 278 -35 8301 159 35 54 chr20 17671009 17671177 -54482705 + L1MCa LINE L1 1052 1222 -5204 261 0 0 0 chr20 17671177 17671206 -54482676 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 8301 159 35 54 chr20 17671206 17671783 -54482099 + L1MCa LINE L1 1222 1862 -4564 2210 113 0 10 chr20 17671783 17672092 -54481790 + AluSx SINE Alu 1 306 -6 2839 233 9 68 chr20 17672100 17672125 -54481757 + L1MCa LINE L1 2477 2502 -3924 2078 148 83 3 chr20 17672125 17672464 -54481418 + MER47A DNA MER2_type 1 366 0 2839 233 9 68 chr20 17672464 17672575 -54481307 + L1MCa LINE L1 2502 2618 -3808 2018 109 35 3 chr20 17672575 17672858 -54481024 + AluSc SINE Alu 1 292 -17 2839 233 9 68 chr20 17672858 17673412 -54480470 + L1MCa LINE L1 2618 3203 -3223 2408 104 0 0 chr20 17673412 17673721 -54480161 + AluSx SINE Alu 4 312 0 2839 233 9 68 chr20 17673721 17673839 -54480043 + L1MCa LINE L1 3203 3221 -3205 2233 87 38 0 chr20 17673839 17674126 -54479756 - AluSq SINE Alu -15 298 1 2839 233 9 68 chr20 17674126 17674307 -54479575 + L1MCa LINE L1 3221 3411 -3015 248 336 62 31 chr20 17674790 17674918 -54478964 + LTR67 LTR ERVL 142 273 -284 359 259 102 0 chr20 17675002 17675110 -54478772 + LTR67 LTR ERVL 439 557 0 2445 97 0 0 chr20 17675258 17675567 -54478315 + AluSq SINE Alu 1 309 -4 356 0 23 0 chr20 17675711 17675755 -54478127 + (GA)n Simple_repeat Simple_repeat 2 46 0 1072 193 0 10 chr20 17675764 17675961 -54477921 + AluJo SINE Alu 3 197 -115 970 170 12 0 chr20 17676259 17676458 -54477424 + AluJb SINE Alu 121 321 0 1994 134 0 3 chr20 17676464 17676776 -54477106 + AluSx SINE Alu 3 313 0 4030 151 77 59 chr20 17676776 17677114 -54476768 + L1MC2 LINE L1 5443 5774 -570 1670 146 4 0 chr20 17677114 17677368 -54476514 + AluSx SINE Alu 1 255 -57 4030 151 77 59 chr20 17677368 17677734 -54476148 + L1MC2 LINE L1 5774 6168 -176 2147 102 0 3 chr20 17677734 17678045 -54475837 + AluSx SINE Alu 1 310 0 4030 151 77 59 chr20 17678045 17678214 -54475668 + L1MC2 LINE L1 6168 6333 -11 226 250 0 0 chr20 17678540 17678596 -54475286 + MIR SINE MIR 97 152 -110 2227 106 0 0 chr20 17678610 17678926 -54474956 - AluSq SINE Alu 0 316 1 1926 137 0 65 chr20 17679609 17679931 -54473951 - AluSx SINE Alu -11 301 1 1984 101 18 7 chr20 17679957 17680261 -54473621 + AluSc SINE Alu 1 307 0 889 206 5 57 chr20 17680307 17680375 -54473507 + MER5A DNA MER1_type 6 76 -113 2140 121 44 0 chr20 17680375 17680673 -54473209 + AluSx SINE Alu 1 311 -1 889 206 5 57 chr20 17680673 17680798 -54473084 + MER5A DNA MER1_type 76 189 0 3239 260 119 38 chr20 17680805 17681248 -54472634 + L2 LINE L2 1567 1973 -1340 2112 139 0 0 chr20 17681248 17681549 -54472333 - AluSx SINE Alu -11 301 1 3239 260 119 38 chr20 17681549 17682150 -54471732 + L2 LINE L2 1973 2524 -789 1919 142 0 39 chr20 17682150 17682460 -54471422 - AluSx SINE Alu -14 298 1 3239 260 119 38 chr20 17682460 17682518 -54471364 + L2 LINE L2 2524 2576 -737 2162 125 3 3 chr20 17682518 17682829 -54471053 - AluSx SINE Alu -1 311 1 3239 260 119 38 chr20 17682829 17683067 -54470815 + L2 LINE L2 2576 2793 -520 2165 117 3 0 chr20 17683067 17683365 -54470517 - AluSx SINE Alu -13 299 1 3239 260 119 38 chr20 17683365 17683635 -54470247 + L2 LINE L2 2793 3306 -7 2178 177 52 74 chr20 17684189 17684255 -54469627 - MLT1D LTR MaLR -2 503 437 2223 124 3 0 chr20 17684255 17684561 -54469321 + AluSx SINE Alu 1 307 -5 2178 177 52 74 chr20 17684561 17685008 -54468874 - MLT1D LTR MaLR -68 437 1 207 0 0 0 chr20 17685063 17685086 -54468796 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2208 112 20 0 chr20 17685223 17685518 -54468364 + AluSx SINE Alu 1 301 -11 949 304 33 18 chr20 17686109 17686505 -54467377 - LTR16A1 LTR ERVL -1 456 73 5215 134 9 36 chr20 17687521 17687742 -54466140 + LTR39 LTR ERV1 3 229 -554 1521 87 0 5 chr20 17687742 17687938 -54465944 - AluSx SINE Alu -117 195 1 5215 134 9 36 chr20 17687938 17688146 -54465736 + LTR39 LTR ERV1 229 441 -342 2123 94 45 0 chr20 17688146 17688434 -54465448 - AluSp SINE Alu -12 301 1 5215 134 9 36 chr20 17688434 17688806 -54465076 + LTR39 LTR ERV1 441 783 0 2151 108 3 0 chr20 17688887 17689173 -54464709 - AluSx SINE Alu -25 287 1 370 309 29 15 chr20 17689247 17689383 -54464499 + MIR3 SINE MIR 20 157 -51 339 115 0 0 chr20 17689383 17689435 -54464447 - MLT1K LTR MaLR 0 588 537 561 169 0 0 chr20 17689458 17689541 -54464341 + AluJ/FLAM SINE Alu 5 87 -225 201 154 0 0 chr20 17689551 17689590 -54464292 + GA-rich Low_complexity Low_complexity 2 40 0 491 265 134 67 chr20 17689606 17689919 -54463963 - MLT1K LTR MaLR -122 466 133 196 243 57 29 chr20 17690092 17690162 -54463720 + L2 LINE L2 3201 3272 0 2013 128 28 0 chr20 17690379 17690667 -54463215 + AluSx SINE Alu 1 296 -16 237 132 0 0 chr20 17691297 17691335 -54462547 + (TTCC)n Simple_repeat Simple_repeat 3 40 0 1755 132 0 0 chr20 17691393 17691643 -54462239 + AluSx SINE Alu 39 288 -24 285 308 30 23 chr20 17691813 17691946 -54461936 - LTR16C LTR ERVL 0 491 358 253 139 23 0 chr20 17692336 17692379 -54461503 + Tigger1 DNA MER2_type 2030 2073 -345 2318 99 0 0 chr20 17692379 17692682 -54461200 - AluSq SINE Alu -10 303 1 2233 104 10 0 chr20 17692726 17693015 -54460867 + AluSx SINE Alu 1 292 -20 832 164 0 8 chr20 17693049 17693177 -54460705 + FLAM_C SINE Alu 1 127 -6 2004 102 6 75 chr20 17693453 17693785 -54460097 - AluSg SINE Alu -1 309 1 233 226 20 69 chr20 17694191 17694293 -54459589 + LTR67 LTR ERVL 457 553 -4 2183 82 14 0 chr20 17694380 17694692 -54459190 + AluSx SINE Alu 1 316 0 6923 186 11 0 chr20 17694692 17695008 -54458874 + L1PA15 LINE L1 4001 4312 -1853 2097 102 20 10 chr20 17695008 17695301 -54458581 - AluSq SINE Alu -5 308 13 6923 186 11 0 chr20 17695301 17697169 -54456713 + L1PA15 LINE L1 4312 6162 -3 434 228 209 13 chr20 17697170 17697474 -54456408 + L1ME3A LINE L1 5755 6165 -5 1022 186 0 0 chr20 17697499 17697676 -54456206 + FRAM SINE Alu 1 175 -1 271 310 75 32 chr20 17697681 17697868 -54456014 - L2 LINE L2 -95 3218 3024 353 254 67 30 chr20 17698422 17698587 -54455295 - MLT1K LTR MaLR -416 172 2 1199 182 250 5 chr20 17698647 17699132 -54454750 + MLT1E1 LTR MaLR 2 649 -5 2178 126 0 0 chr20 17699513 17699815 -54454067 + AluSx SINE Alu 1 302 -10 673 220 57 0 chr20 17700037 17700178 -54453704 - MLT1G LTR MaLR -1 589 441 363 264 0 0 chr20 17700178 17700269 -54453613 - MLT1-int LTR MaLR -996 375 285 1488 196 37 21 chr20 17700584 17700722 -54453160 - Charlie1 DNA MER1_type 0 2761 2627 2243 103 3 3 chr20 17700722 17701034 -54452848 + AluSx SINE Alu 1 312 0 1488 196 37 21 chr20 17701034 17701273 -54452609 - Charlie1 DNA MER1_type -134 2627 2378 243 290 33 66 chr20 17702232 17702415 -54451467 - L2 LINE L2 -1162 2152 1976 4967 152 112 19 chr20 17702802 17704018 -54449864 - L1MB7 LINE L1 -13 6171 4815 395 244 70 35 chr20 17704012 17704184 -54449698 - L1ME LINE L1 -346 5775 5598 * 2321 94 0 44 chr20 17704252 17704571 -54449311 + AluSx SINE Alu 1 305 -7 2236 125 0 0 chr20 17705024 17705328 -54448554 + AluSx SINE Alu 1 304 -8 2828 152 46 33 chr20 17705576 17705661 -54448221 - L1MB7 LINE L1 -45 6139 6057 2371 83 3 0 chr20 17705661 17705963 -54447919 - AluSp SINE Alu -8 305 3 2280 100 7 0 chr20 17705965 17706264 -54447618 - AluSq SINE Alu -12 301 1 2828 152 46 33 chr20 17706264 17706722 -54447160 - L1MB7 LINE L1 -127 6057 5586 33 0 0 0 chr20 17707264 17707297 -54446585 + AT_rich Low_complexity Low_complexity 1 33 0 419 269 159 15 chr20 17707618 17707882 -54446000 - L1MB7 LINE L1 -2210 5598 5297 2325 77 13 19 chr20 17708317 17708629 -54445253 - AluSg SINE Alu 0 310 1 2038 94 47 0 chr20 17708650 17708927 -54444955 - AluSg SINE Alu -20 290 1 21 0 0 0 chr20 17708940 17708961 -54444921 + AT_rich Low_complexity Low_complexity 1 21 0 29 78 0 0 chr20 17709471 17709535 -54444347 + AT_rich Low_complexity Low_complexity 1 64 0 292 236 111 65 chr20 17709579 17709778 -54444104 - MER5C DNA MER1_type 0 324 117 207 171 0 0 chr20 17709958 17709993 -54443889 + T-rich Low_complexity Low_complexity 4 38 0 2263 99 10 7 chr20 17710001 17710305 -54443577 - AluSx SINE Alu -7 305 1 21 0 0 0 chr20 17710399 17710420 -54443462 + AT_rich Low_complexity Low_complexity 1 21 0 861 121 0 0 chr20 17711115 17711239 -54442643 + AluSg/x SINE Alu 176 299 -13 2255 123 7 0 chr20 17711326 17711628 -54442254 - AluSq SINE Alu -9 304 1 288 299 25 83 chr20 17711628 17711785 -54442097 - MIR3 SINE MIR -56 152 5 323 339 55 0 chr20 17712227 17712336 -54441546 - MIR SINE MIR -92 116 2 2906 135 19 19 chr20 17712534 17712962 -54440920 - LTR24 LTR ERV1 0 467 37 1989 86 75 7 chr20 17712962 17713242 -54440640 - AluSq SINE Alu -14 299 1 2906 135 19 19 chr20 17713242 17713280 -54440602 - LTR24 LTR ERV1 -429 38 1 836 228 130 16 chr20 17713489 17713796 -54440086 + MER113 DNA MER1_type? 6 347 -174 1921 152 0 7 chr20 17714266 17714569 -54439313 - AluSx SINE Alu -11 301 1 26 0 0 0 chr20 17715867 17715893 -54437989 + AT_rich Low_complexity Low_complexity 1 26 0 634 231 64 54 chr20 17718377 17718580 -54435302 + MIR SINE MIR 58 262 0 23 0 0 0 chr20 17719253 17719276 -54434606 + AT_rich Low_complexity Low_complexity 1 23 0 2120 105 0 24 chr20 17719276 17719570 -54434312 - AluSx SINE Alu -25 287 1 360 64 0 0 chr20 17720399 17720446 -54433436 + (TG)n Simple_repeat Simple_repeat 2 48 0 2003 92 0 98 chr20 17721514 17721841 -54432041 + AluSg SINE Alu 1 295 -15 22 35 0 0 chr20 17722225 17722254 -54431628 + AT_rich Low_complexity Low_complexity 1 29 0 2100 123 0 10 chr20 17722282 17722584 -54431298 - AluSx SINE Alu -13 299 1 207 114 0 0 chr20 17724616 17724651 -54429231 + (TG)n Simple_repeat Simple_repeat 2 36 0 2431 77 3 0 chr20 17724909 17725209 -54428673 + AluY SINE Alu 1 301 -10 25 0 0 0 chr20 17726147 17726172 -54427710 + AT_rich Low_complexity Low_complexity 1 25 0 333 0 0 0 chr20 17728183 17728220 -54425662 + (TG)n Simple_repeat Simple_repeat 2 38 0 622 269 31 16 chr20 17728781 17728974 -54424908 + Charlie8 DNA MER1_type 41 236 -2181 216 267 55 64 chr20 17729873 17729992 -54423890 + MER5B DNA MER1_type 7 132 -57 370 165 144 0 chr20 17730016 17730113 -54423769 - L1MD1 LINE L1 -10 6232 6122 1073 181 52 44 chr20 17730163 17730433 -54423449 - L1ME3A LINE L1 -19 6151 5880 * 3498 192 42 49 chr20 17730428 17731003 -54422879 - L1MB5 LINE L1 -1 6173 5605 2278 91 7 13 chr20 17731003 17731310 -54422572 - AluSq SINE Alu -8 305 1 3498 192 42 49 chr20 17731310 17731660 -54422222 - L1MB5 LINE L1 -569 5605 5254 475 261 27 53 chr20 17731750 17731938 -54421944 + L2 LINE L2 3077 3259 -54 1830 192 3 6 chr20 17731940 17732274 -54421608 + MER58B DNA MER1_type 1 333 -8 192 129 0 0 chr20 17732283 17732314 -54421568 + L2 LINE L2 3281 3311 -2 1390 143 4 39 chr20 17732722 17732953 -54420929 - AluSg/x SINE Alu -15 295 73 1077 243 48 54 chr20 17733792 17733883 -54419999 - L2 LINE L2 -1 3312 3222 2549 63 0 0 chr20 17733883 17734186 -54419696 - AluY SINE Alu -8 303 1 1077 243 48 54 chr20 17734186 17734465 -54419417 - L2 LINE L2 -91 3222 2944 255 61 0 0 chr20 17734555 17734588 -54419294 + (CA)n Simple_repeat Simple_repeat 2 34 0 812 253 81 23 chr20 17734658 17734919 -54418963 - L2 LINE L2 -358 2956 2681 33 0 0 0 chr20 17734991 17735024 -54418858 + AT_rich Low_complexity Low_complexity 1 33 0 1345 178 23 23 chr20 17735024 17735282 -54418600 - AluJo SINE Alu -20 292 35 1573 207 21 0 chr20 17735364 17735692 -54418190 - L1ME1 LINE L1 -5 6230 5896 264 59 0 0 chr20 17735694 17735728 -54418154 + (TA)n Simple_repeat Simple_repeat 2 35 0 979 209 75 41 chr20 17735755 17736023 -54417859 - L1ME1 LINE L1 -488 5747 5471 2366 161 8 62 chr20 17736024 17736119 -54417763 - MER31A LTR ERV1 0 485 386 2439 184 12 5 chr20 17736119 17736542 -54417340 - MSTB LTR MaLR 0 426 1 2366 161 8 62 chr20 17736542 17736948 -54416934 - MER31A LTR ERV1 -99 386 11 325 188 145 16 chr20 17736954 17737140 -54416742 - L1ME1 LINE L1 -743 5472 5265 1693 188 0 13 chr20 17737153 17737456 -54416426 - AluJb SINE Alu -13 299 1 2186 138 0 0 chr20 17737458 17737763 -54416119 - AluSx SINE Alu -7 305 1 5801 147 29 57 chr20 17737775 17737835 -54416047 - L1MC3 LINE L1 -8 7777 7717 2323 125 9 9 chr20 17737835 17738172 -54415710 + MER1B DNA MER1_type 1 337 0 5801 147 29 57 chr20 17738172 17738533 -54415349 - L1MC3 LINE L1 -68 7717 7347 2469 67 0 10 chr20 17738533 17738846 -54415036 + AluY SINE Alu 1 310 -1 5801 147 29 57 chr20 17738846 17739415 -54414467 - L1MC3 LINE L1 -438 7347 6825 1885 132 3 33 chr20 17739415 17739718 -54414164 - AluJb SINE Alu -18 294 1 5801 147 29 57 chr20 17739718 17739950 -54413932 - L1MC3 LINE L1 -960 6825 6588 2221 215 136 16 chr20 17739961 17740775 -54413107 - L1ME1 LINE L1 -952 5263 4352 593 174 12 72 chr20 17740868 17741035 -54412847 - L1ME1 LINE L1 -2154 4061 3905 * 38625 80 7 8 chr20 17741023 17744324 -54409558 - L1PA6 LINE L1 -4 6150 2865 2293 71 14 7 chr20 17744324 17744620 -54409262 - AluSp SINE Alu -14 299 2 38625 80 7 8 chr20 17744620 17747472 -54406410 - L1PA6 LINE L1 -3289 2865 11 334 239 0 0 chr20 17747488 17747559 -54406323 - L1ME1 LINE L1 -2303 3912 3842 849 234 80 18 chr20 17747564 17747838 -54406044 - L1M4 LINE L1 -2148 3998 3708 751 229 53 33 chr20 17747856 17748157 -54405725 + L1M4 LINE L1 3000 3306 -2840 2212 279 49 53 chr20 17748247 17748299 -54405583 - L1ME1 LINE L1 -4091 2305 2254 2195 112 7 0 chr20 17748299 17748595 -54405287 - AluSq SINE Alu -15 298 1 2212 279 49 53 chr20 17748595 17749817 -54404065 - L1ME1 LINE L1 -4142 2254 1035 2246 117 0 0 chr20 17749817 17750124 -54403758 - AluSg SINE Alu -1 309 3 2212 279 49 53 chr20 17750124 17750341 -54403541 - L1ME1 LINE L1 -5361 1035 819 579 188 36 11 chr20 17750342 17750459 -54403423 - L1P1 LINE L1 -644 5511 5389 2094 129 0 7 chr20 17750459 17750762 -54403120 - AluSx SINE Alu -11 301 1 579 188 36 11 chr20 17750762 17750778 -54403104 - L1P1 LINE L1 -766 5389 5375 399 197 0 0 chr20 17750787 17750858 -54403024 - AluJo SINE Alu 0 302 232 4708 206 68 32 chr20 17750858 17751354 -54402528 - L1M4 LINE L1 -756 5390 4913 2412 77 0 3 chr20 17751354 17751654 -54402228 + AluY SINE Alu 1 299 -12 4708 206 68 32 chr20 17751654 17752350 -54401532 - L1M4 LINE L1 -1233 4913 4143 865 74 15 7 chr20 17752350 17752485 -54401397 + (TTCC)n Simple_repeat Simple_repeat 3 138 0 4708 206 68 32 chr20 17752485 17752622 -54401260 - L1M4 LINE L1 -2003 4143 4012 1317 202 4 4 chr20 17752625 17752868 -54401014 - AluJo SINE Alu -69 243 1 1041 271 77 14 chr20 17752873 17753301 -54400581 - L1M4 LINE L1 -2130 4016 3562 23 78 0 0 chr20 17753908 17753959 -54399923 + AT_rich Low_complexity Low_complexity 1 51 0 1612 229 82 99 chr20 17754021 17754515 -54399367 - L1ME3 LINE L1 -7 6155 5654 424 106 0 0 chr20 17754515 17754581 -54399301 - Alu SINE Alu -8 303 238 2103 119 0 0 chr20 17754581 17754859 -54399023 - AluSx SINE Alu -34 278 1 1612 229 82 99 chr20 17754859 17755656 -54398226 - L1ME3 LINE L1 -506 5656 4823 276 270 145 21 chr20 17755678 17755919 -54397963 - L1ME3 LINE L1 -2509 3637 3367 946 243 12 0 chr20 17755920 17756175 -54397707 - L1ME3 LINE L1 -3296 2850 2593 287 225 18 63 chr20 17756182 17756293 -54397589 - L1MC/D LINE L1 -2377 5431 5326 2051 108 11 18 chr20 17756605 17756912 -54396970 - AluSx SINE Alu 0 305 1 251 270 0 0 chr20 17756913 17756976 -54396906 - MIR SINE MIR -51 211 149 445 165 155 10 chr20 17757042 17757139 -54396743 - MIR SINE MIR -66 196 86 358 311 145 4 chr20 17757147 17757382 -54396500 - LTR41 LTR ERVL -6 767 500 948 157 6 17 chr20 17757771 17757943 -54395939 - LTR41 LTR ERVL -603 170 1 23 108 0 0 chr20 17758345 17758438 -54395444 + AT_rich Low_complexity Low_complexity 1 93 0 290 328 113 34 chr20 17758749 17758953 -54394929 + MIR SINE MIR 12 231 -31 236 269 0 0 chr20 17758980 17759032 -54394850 + (CAT)n Simple_repeat Simple_repeat 1 52 0 21 0 0 0 chr20 17759708 17759729 -54394153 + AT_rich Low_complexity Low_complexity 1 21 0 2013 147 0 3 chr20 17760235 17760548 -54393334 - AluJo SINE Alu 0 312 1 2186 65 61 0 chr20 17761061 17761340 -54392542 + AluY SINE Alu 1 296 -15 370 274 98 52 chr20 17761748 17762076 -54391806 + L1M4 LINE L1 4632 4974 -1172 338 292 98 31 chr20 17762289 17762812 -54391070 + L1M4 LINE L1 5213 5779 -399 1396 221 40 48 chr20 17762897 17763268 -54390614 - MLT1A2 LTR MaLR -4 370 3 22 0 0 0 chr20 17763867 17763889 -54389993 + AT_rich Low_complexity Low_complexity 1 22 0 251 280 20 0 chr20 17763949 17764049 -54389833 - L1M4 LINE L1 -1458 4688 4587 647 235 55 18 chr20 17764086 17764303 -54389579 - L1M4 LINE L1 -1676 4470 4246 766 118 7 15 chr20 17764314 17764449 -54389433 + (TTTC)n Simple_repeat Simple_repeat 4 137 0 370 143 0 0 chr20 17764449 17764505 -54389377 + (TCCCC)n Simple_repeat Simple_repeat 1 56 0 1930 119 37 0 chr20 17764514 17764782 -54389100 - AluSx SINE Alu -34 278 1 1877 237 37 19 chr20 17764782 17765058 -54388824 - L1M4 LINE L1 -1904 4242 3972 2178 155 19 14 chr20 17765058 17765420 -54388462 - THE1B LTR MaLR 0 364 1 1877 237 37 19 chr20 17765420 17765716 -54388166 - L1M4 LINE L1 -2174 3972 3660 3566 242 54 51 chr20 17765725 17767044 -54386838 - L1MEc LINE L1 -5039 1357 35 768 119 16 61 chr20 17767223 17767485 -54386397 - MLT1A1 LTR MaLR -18 347 19 2321 102 0 7 chr20 17768006 17768310 -54385572 - AluSx SINE Alu -10 302 1 1386 277 81 42 chr20 17768480 17769259 -54384623 - L2 LINE L2 -16 3297 2495 22 0 0 0 chr20 17769617 17769639 -54384243 + AT_rich Low_complexity Low_complexity 1 22 0 216 67 0 0 chr20 17771493 17771523 -54382359 + (GA)n Simple_repeat Simple_repeat 1 30 0 348 302 130 12 chr20 17771881 17772219 -54381663 + L1ME4a LINE L1 5528 5905 -216 30 45 0 0 chr20 17772265 17772309 -54381573 + AT_rich Low_complexity Low_complexity 1 44 0 1037 174 0 0 chr20 17772395 17772556 -54381326 + FRAM SINE Alu 1 156 -20 530 225 105 29 chr20 17772738 17772947 -54380935 - HAL1 LINE L1 -561 1946 1722 515 285 116 12 chr20 17772961 17773280 -54380602 - HAL1 LINE L1 -925 1582 1231 5044 111 19 1 chr20 17773290 17774037 -54379845 - L1PA13 LINE L1 -19 6144 5385 1446 140 51 35 chr20 17774035 17774350 -54379532 - L1MD1 LINE L1 -248 5994 5675 * 6646 202 63 78 chr20 17774355 17775686 -54378196 - L1MB3 LINE L1 0 6419 5070 2163 111 3 20 chr20 17775686 17775992 -54377890 - AluSx SINE Alu -11 301 1 6646 202 63 78 chr20 17775992 17776908 -54376974 - L1MB3 LINE L1 -1349 5070 4142 916 111 0 22 chr20 17776908 17777043 -54376839 + FLAM_C SINE Alu 2 133 0 6646 202 63 78 chr20 17777043 17777728 -54376154 - L1MB3 LINE L1 -2277 4142 3448 425 103 15 0 chr20 17777728 17777796 -54376086 + (CA)n Simple_repeat Simple_repeat 2 70 0 6646 202 63 78 chr20 17777796 17777821 -54376061 - L1MB3 LINE L1 -2971 3448 3424 1992 155 7 0 chr20 17777821 17778117 -54375765 - AluJb SINE Alu -14 298 1 6646 202 63 78 chr20 17778117 17778776 -54375106 - L1MB3 LINE L1 -2995 3424 2865 3957 170 123 25 chr20 17778786 17779045 -54374837 - L1MB3 LINE L1 -4144 2240 2008 2109 137 0 3 chr20 17779045 17779351 -54374531 + AluSx SINE Alu 1 305 -7 3957 170 123 25 chr20 17779351 17780071 -54373811 - L1MB3 LINE L1 -4376 2008 1247 433 271 59 77 chr20 17780521 17780960 -54372922 - L1MEd LINE L1 -5088 1031 601 375 353 60 57 chr20 17781145 17781547 -54372335 - L1MEd LINE L1 -5701 418 16 27 62 0 0 chr20 17781548 17781596 -54372286 + AT_rich Low_complexity Low_complexity 1 48 0 1114 169 59 98 chr20 17781787 17782194 -54371688 - Charlie5 DNA MER1_type 0 2616 2226 410 224 0 0 chr20 17782189 17782287 -54371595 - Charlie5 DNA MER1_type -2505 107 10 * 1806 161 33 3 chr20 17782840 17783139 -54370743 + AluJb SINE Alu 1 308 -4 1566 209 98 5 chr20 17783161 17783581 -54370301 - L1ME2 LINE L1 -37 6127 5669 848 280 66 96 chr20 17783678 17784616 -54369266 - L2 LINE L2 -45 3268 2365 5989 146 12 17 chr20 17784805 17785305 -54368577 + Tigger1 DNA MER2_type 1404 1905 -513 2440 85 0 0 chr20 17785305 17785610 -54368272 - AluSx SINE Alu -7 305 1 5989 146 12 17 chr20 17785610 17786129 -54367753 + Tigger1 DNA MER2_type 1905 2418 0 255 290 124 88 chr20 17786372 17786768 -54367114 - MLT1L LTR MaLR -9 606 197 * 268 231 0 0 chr20 17786740 17786792 -54367090 - MLT1J2 LTR MaLR -328 122 71 3787 173 115 68 chr20 17787327 17787471 -54366411 - Tigger6a DNA MER2_type -514 1083 947 1736 160 0 31 chr20 17787471 17787758 -54366124 + AluJo SINE Alu 5 282 -30 3787 173 115 68 chr20 17787758 17788643 -54365239 - Tigger6a DNA MER2_type -650 947 6 358 309 0 0 chr20 17788669 17788779 -54365103 - L1MC5 LINE L1 -518 7443 7334 384 22 0 0 chr20 17790525 17790570 -54363312 + (TG)n Simple_repeat Simple_repeat 2 46 0 249 33 0 0 chr20 17791258 17791288 -54362594 + (CA)n Simple_repeat Simple_repeat 2 31 0 360 374 61 0 chr20 17791501 17791664 -54362218 + MIR3 SINE MIR 11 183 -25 284 273 47 62 chr20 17791751 17791879 -54362003 - MER5B DNA MER1_type -1 177 52 226 308 98 30 chr20 17792108 17792241 -54361641 + L2 LINE L2 3172 3313 0 257 346 58 19 chr20 17792375 17792635 -54361247 + L2 LINE L2 2599 2868 -446 380 248 139 36 chr20 17792760 17792897 -54360985 + L2 LINE L2 3160 3310 -3 221 367 33 0 chr20 17794546 17794636 -54359246 - L2 LINE L2 -11 3261 3169 1866 150 3 10 chr20 17797102 17797395 -54356487 - AluSx SINE Alu -21 291 1 204 118 29 0 chr20 17797460 17797494 -54356388 + G-rich Low_complexity Low_complexity 5 39 0 1222 268 109 31 chr20 17797667 17798603 -54355279 - L1MEd LINE L1 -2928 3454 2446 1486 108 0 19 chr20 17798640 17798854 -54355028 - AluSg/x SINE Alu -6 304 95 605 294 71 20 chr20 17798969 17799224 -54354658 - L2 LINE L2 0 3313 3046 312 300 79 66 chr20 17799263 17799490 -54354392 - L1MEd LINE L1 -4650 1734 1505 270 241 139 32 chr20 17799519 17799677 -54354205 - L1MEd LINE L1 -4884 1488 1314 2218 208 61 8 chr20 17799838 17800363 -54353519 - L1ME2 LINE L1 -13 6151 5599 1078 201 5 0 chr20 17801134 17801353 -54352529 - AluJo SINE Alu -2 310 91 2075 106 3 20 chr20 17801659 17801951 -54351931 - AluSx SINE Alu -25 287 1 2188 113 3 7 chr20 17802408 17802709 -54351173 + AluSq SINE Alu 1 300 -13 846 124 41 24 chr20 17803708 17803877 -54350005 + L1MA8 LINE L1 6114 6285 -6 276 273 231 8 chr20 17804470 17804591 -54349291 + MER5A DNA MER1_type 36 183 -6 183 234 0 43 chr20 17807380 17807427 -54346455 + L2 LINE L2 3228 3272 0 725 118 27 0 chr20 17808506 17808616 -54345266 + AluSx SINE Alu 1 113 -199 1217 126 10 43 chr20 17808717 17808747 -54345135 + AluSx SINE Alu 105 134 -176 1812 137 11 7 chr20 17808747 17809025 -54344857 + AluSx SINE Alu 1 279 -33 204 40 0 0 chr20 17809027 17809052 -54344830 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 1217 126 10 43 chr20 17809052 17809225 -54344657 + AluSx SINE Alu 135 304 -6 440 321 52 9 chr20 17809374 17809586 -54344296 + MIR SINE MIR 8 228 -34 368 290 153 0 chr20 17809595 17809726 -54344156 - MIR SINE MIR -4 258 108 249 236 18 0 chr20 17810406 17810461 -54343421 + L3 LINE CR1 1058 1113 -464 469 301 257 0 chr20 17810596 17810892 -54342990 + L3 LINE CR1 1178 1549 -28 288 268 43 78 chr20 17811050 17811281 -54342601 - L1MC4a LINE L1 -1916 5892 5670 353 326 86 11 chr20 17811679 17811854 -54342028 + MER5A DNA MER1_type 1 188 -1 2192 113 10 3 chr20 17812462 17812772 -54341110 - AluSx SINE Alu 0 312 1 264 122 0 0 chr20 17813066 17813107 -54340775 + (TG)n Simple_repeat Simple_repeat 1 41 0 26 0 0 0 chr20 17814184 17814210 -54339672 + AT_rich Low_complexity Low_complexity 1 26 0 339 282 241 11 chr20 17815359 17815533 -54338349 + MIR SINE MIR 33 246 -16 489 196 27 0 chr20 17815537 17815649 -54338233 - HsTC2 DNA Tc2 -3 1895 1781 * 1140 256 70 34 chr20 17815638 17816052 -54337830 - HsTC2 DNA Tc2 -1469 429 1 1699 152 0 16 chr20 17816560 17816817 -54337065 - AluJo SINE Alu -31 281 29 3434 271 69 20 chr20 17817511 17818873 -54335009 + L2 LINE L2 1723 3156 -157 210 37 0 0 chr20 17818903 17818930 -54334952 + (TTTAA)n Simple_repeat Simple_repeat 4 30 0 13497 36 1 0 chr20 17818930 17821326 -54332556 - L1PA4 LINE L1 -13 6142 3753 3491 137 7 5 chr20 17821362 17821933 -54331949 - L1PA16 LINE L1 -1 6165 5594 192 40 0 0 chr20 17824032 17824057 -54329825 + (A)n Simple_repeat Simple_repeat 1 25 0 28 0 0 0 chr20 17824616 17824644 -54329238 + AT_rich Low_complexity Low_complexity 1 28 0 207 0 0 0 chr20 17825140 17825163 -54328719 + (T)n Simple_repeat Simple_repeat 1 23 0 461 243 186 7 chr20 17825165 17825305 -54328577 - MER5A DNA MER1_type -21 168 4 186 43 0 0 chr20 17827287 17827310 -54326572 + (TCCC)n Simple_repeat Simple_repeat 3 25 0 192 158 0 26 chr20 17827453 17827491 -54326391 + L2 LINE L2 3273 3309 -4 7099 50 6 7 chr20 17827593 17829111 -54324771 + L1PA5 LINE L1 4637 6154 0 955 267 76 42 chr20 17829229 17829663 -54324219 - MLT1L LTR MaLR -8 607 159 232 347 14 0 chr20 17829876 17829948 -54323934 - MIR SINE MIR 0 262 190 942 88 51 0 chr20 17830614 17830751 -54323131 - L1PA15 LINE L1 -3 6162 6019 255 187 0 110 chr20 17830751 17830786 -54323096 + L1P LINE L1 4432 4469 -1677 2153 111 13 7 chr20 17830786 17831092 -54322790 + AluSg SINE Alu 1 308 -2 255 187 0 110 chr20 17831092 17831147 -54322735 + L1P LINE L1 4469 4512 -1634 * 13037 210 69 40 chr20 17831144 17831548 -54322334 - L1MA4 LINE L1 -72 6292 5901 351 0 0 0 chr20 17831548 17831587 -54322295 + (CA)n Simple_repeat Simple_repeat 1 39 0 198 0 0 0 chr20 17831591 17831613 -54322269 + (TTCA)n Simple_repeat Simple_repeat 3 24 0 13037 210 69 40 chr20 17831613 17832128 -54321754 - L1MA4 LINE L1 -465 5899 5400 1512 146 0 0 chr20 17832128 17832361 -54321521 - MER46A DNA MER2_type 0 236 4 13037 210 69 40 chr20 17832361 17833159 -54320723 - L1MA4 LINE L1 -964 5400 4627 1798 169 13 3 chr20 17833159 17833461 -54320421 - AluJo SINE Alu -7 305 1 13037 210 69 40 chr20 17833461 17838003 -54315879 - L1MA4 LINE L1 -1737 4627 1 385 260 42 20 chr20 17838194 17838388 -54315494 - L1ME1 LINE L1 -219 5951 5753 * 495 250 31 21 chr20 17838380 17838572 -54315310 - L1MC5 LINE L1 -810 7151 6958 216 184 0 69 chr20 17838588 17838675 -54315207 + (TTTA)n Simple_repeat Simple_repeat 2 82 0 967 272 80 41 chr20 17838682 17840433 -54313449 - L1MCc LINE L1 -3666 3275 1206 239 191 15 15 chr20 17840434 17840447 -54313435 + (TA)n Simple_repeat Simple_repeat 1 13 -55 189 74 0 0 chr20 17840447 17840474 -54313408 + (CA)n Simple_repeat Simple_repeat 2 28 0 239 191 15 15 chr20 17840474 17840528 -54313354 + (TA)n Simple_repeat Simple_repeat 12 68 0 2032 194 0 3 chr20 17840571 17840957 -54312925 - L1PB4 LINE L1 -2 6154 5770 645 256 105 32 chr20 17840957 17841176 -54312706 - MLT1L LTR MaLR -53 562 328 5242 118 32 23 chr20 17841239 17842068 -54311814 - L1PA16 LINE L1 0 6166 5315 1824 140 54 0 chr20 17842068 17842332 -54311550 + AluSg SINE Alu 1 282 -28 432 0 0 0 chr20 17842332 17842380 -54311502 + (CA)n Simple_repeat Simple_repeat 1 48 0 1824 140 54 0 chr20 17842380 17842394 -54311488 + AluSg SINE Alu 282 294 -16 5242 118 32 23 chr20 17842394 17843067 -54310815 - L1PA16 LINE L1 -851 5315 4650 475 330 89 38 chr20 17843535 17843962 -54309920 - L1MCc LINE L1 -5956 467 19 413 235 28 123 chr20 17844016 17844267 -54309615 - L1MC4a LINE L1 -888 6920 6687 2236 104 0 3 chr20 17844359 17844657 -54309225 + AluSx SINE Alu 3 299 -13 27 0 0 0 chr20 17844923 17844950 -54308932 + AT_rich Low_complexity Low_complexity 1 27 0 28 0 0 0 chr20 17845552 17845580 -54308302 + AT_rich Low_complexity Low_complexity 1 28 0 199 300 0 57 chr20 17846033 17846103 -54307779 + MIR3 SINE MIR 8 73 -135 236 253 145 36 chr20 17846426 17846509 -54307373 - MIR SINE MIR -55 153 62 1762 204 33 82 chr20 17846924 17847434 -54306448 - MLT2B3 LTR ERVL 0 554 70 526 254 182 10 chr20 17849780 17849989 -54303893 - MIR SINE MIR -13 249 5 328 177 16 0 chr20 17850769 17850831 -54303051 + L1MB3 LINE L1 5740 5802 -366 * 816 110 15 7 chr20 17850822 17850958 -54302924 + L1MB3 LINE L1 6026 6162 -21 207 162 0 0 chr20 17851153 17851190 -54302692 + T-rich Low_complexity Low_complexity 1 37 0 381 264 135 7 chr20 17851567 17851715 -54302167 + MLT1I LTR MaLR 242 408 -1 1281 252 114 11 chr20 17851716 17852181 -54301701 - L2 LINE L2 -2190 1124 612 404 286 86 71 chr20 17852194 17852685 -54301197 - L1MEd LINE L1 -4736 1574 1042 807 237 59 5 chr20 17852725 17852911 -54300971 + MER58C DNA MER1_type 1 196 -19 1340 201 22 4 chr20 17853603 17853871 -54300011 - L1M4 LINE L1 -1878 4268 3996 1187 255 50 30 chr20 17853863 17854338 -54299544 - L1MC5 LINE L1 -596 7365 6881 * 6730 68 6 0 chr20 17855576 17855948 -54297934 - L1PA7 LINE L1 -7 6147 5779 2084 119 13 6 chr20 17855948 17856259 -54297623 - AluSq SINE Alu 0 313 1 6730 68 6 0 chr20 17856259 17856982 -54296900 - L1PA7 LINE L1 -375 5779 5063 6976 120 34 4 chr20 17858091 17859899 -54293983 + L1MA2 LINE L1 4440 6304 0 22 0 0 0 chr20 17860341 17860363 -54293519 + AT_rich Low_complexity Low_complexity 1 22 0 416 265 81 81 chr20 17860692 17860877 -54293005 + MIR3 SINE MIR 23 207 -1 740 118 0 55 chr20 17860921 17860936 -54292946 + AluSg/x SINE Alu 179 193 -119 1505 104 0 5 chr20 17860936 17861137 -54292745 + AluSq SINE Alu 21 220 -93 740 118 0 55 chr20 17861137 17861248 -54292634 + AluSg/x SINE Alu 193 298 -14 21 36 0 0 chr20 17861433 17861461 -54292421 + AT_rich Low_complexity Low_complexity 1 28 0 561 130 191 0 chr20 17861867 17861982 -54291900 - L1MCa LINE L1 -4115 2311 2175 2895 129 61 0 chr20 17861982 17862337 -54291545 - L1PB4 LINE L1 -2 6154 5759 252 0 0 0 chr20 17862337 17862365 -54291517 + (TG)n Simple_repeat Simple_repeat 2 29 0 2895 129 61 0 chr20 17862365 17862499 -54291383 - L1PB4 LINE L1 -397 5759 5635 489 92 0 0 chr20 17862499 17862564 -54291318 - HSMAR1 DNA Mariner -4 1283 1219 248 352 62 39 chr20 17864020 17864148 -54289734 - L2 LINE L2 -5 3267 3137 278 244 8 81 chr20 17864212 17864335 -54289547 + L1MEd LINE L1 2 115 -6004 276 357 67 5 chr20 17864346 17864556 -54289326 + L1MEd LINE L1 561 783 -5336 1415 119 0 5 chr20 17864557 17864786 -54289096 - AluSq SINE Alu 0 318 91 2272 111 0 3 chr20 17864792 17865099 -54288783 - AluSx SINE Alu -6 306 1 321 261 160 37 chr20 17865170 17865358 -54288524 + L1ME LINE L1 5550 5760 -402 5493 115 15 19 chr20 17865713 17866588 -54287294 + L1PB2 LINE L1 5279 6149 -2 1688 192 0 10 chr20 17866614 17866921 -54286961 - AluJo SINE Alu -8 304 1 7181 47 10 0 chr20 17867223 17868775 -54285107 - L1PA6 LINE L1 -11 6143 4586 1480 132 4 4 chr20 17868778 17869005 -54284877 - L1P3 LINE L1 -6225 236 10 535 278 117 5 chr20 17869473 17869678 -54284204 + L2 LINE L2 3010 3237 -76 1887 140 0 0 chr20 17870637 17870915 -54282967 + AluSx SINE Alu 35 312 0 2114 141 3 0 chr20 17872665 17872977 -54280905 - AluSq SINE Alu 0 313 1 319 279 101 53 chr20 17873273 17873487 -54280395 + L1MC4 LINE L1 7673 7910 -132 328 39 20 20 chr20 17873487 17873538 -54280344 + (TG)n Simple_repeat Simple_repeat 2 52 0 319 279 101 53 chr20 17873538 17873660 -54280222 + L1MC4 LINE L1 7910 8025 -17 1837 150 14 0 chr20 17873967 17874247 -54279635 - AluSg SINE Alu -26 284 1 3801 186 54 49 chr20 17874505 17875418 -54278464 - L1MD2 LINE L1 0 6359 5443 2313 144 16 55 chr20 17875452 17875507 -54278375 - L1MB2 LINE L1 -7 6164 6108 1674 164 3 54 chr20 17875507 17875824 -54278058 - AluJo SINE Alu -4 308 8 2313 144 16 55 chr20 17875824 17876219 -54277663 - L1MB2 LINE L1 -63 6108 5732 2282 145 10 21 chr20 17876220 17876607 -54277275 - MLT1B LTR MaLR 0 390 8 4288 189 41 15 chr20 17876625 17877997 -54275885 - L1MB2 LINE L1 -451 5732 4329 252 167 0 0 chr20 17878027 17878075 -54275807 - L1MB2 LINE L1 -1776 4370 4323 842 195 0 6 chr20 17878313 17878472 -54275410 - MER3 DNA MER1_type -4 205 48 1230 217 5 0 chr20 17878968 17879189 -54274693 + MER58A DNA MER1_type 3 224 0 4987 260 148 22 chr20 17879248 17881731 -54272151 - L2 LINE L2 -6 3307 510 2069 121 27 3 chr20 17882071 17882368 -54271514 + AluSq SINE Alu 1 304 -9 232 103 0 0 chr20 17883062 17883101 -54270781 + L1PA16 LINE L1 6126 6164 -2 2725 48 0 0 chr20 17883428 17883761 -54270121 - L1PA6 LINE L1 0 6154 5822 188 0 74 0 chr20 17883896 17883923 -54269959 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 7685 106 22 90 chr20 17884029 17885421 -54268461 - HSMAR2 DNA Mariner -1 1301 4 396 322 86 82 chr20 17886356 17887063 -54266819 + L2 LINE L2 2600 3312 -1 372 221 91 0 chr20 17888036 17888113 -54265769 - L2 LINE L2 0 3313 3230 204 200 18 18 chr20 17888142 17888197 -54265685 + (TA)n Simple_repeat Simple_repeat 1 55 0 13158 140 49 32 chr20 17888392 17890746 -54263136 + Tigger1 DNA MER2_type 24 2417 -1 391 326 36 32 chr20 17892383 17892916 -54260966 + L1MC4a LINE L1 4799 5333 -813 262 278 96 70 chr20 17892962 17893149 -54260733 - MLT1J LTR MaLR -55 456 265 299 233 44 37 chr20 17893214 17893358 -54260524 - MLT1L LTR MaLR -355 156 1 1201 281 59 47 chr20 17893358 17893932 -54259950 + L1MC4a LINE L1 5331 5911 -1897 284 321 30 48 chr20 17894493 17894661 -54259221 + L2 LINE L2 2972 3136 -177 23 0 0 0 chr20 17896142 17896165 -54257717 + AT_rich Low_complexity Low_complexity 1 23 0 308 275 127 49 chr20 17896607 17896749 -54257133 - MIR3 SINE MIR -36 172 20 190 279 59 0 chr20 17897683 17897751 -54256131 - MIR SINE MIR -73 189 118 228 35 0 0 chr20 17898038 17898067 -54255815 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 1747 119 0 35 chr20 17898071 17898331 -54255551 - AluSg1 SINE Alu -31 278 28 434 83 14 0 chr20 17898385 17898457 -54255425 + (TG)n Simple_repeat Simple_repeat 1 73 0 529 329 14 18 chr20 17898810 17899029 -54254853 + L2 LINE L2 2452 2669 -645 584 263 210 18 chr20 17899125 17899463 -54254419 + L2 LINE L2 2911 3313 0 332 195 103 23 chr20 17899902 17899989 -54253893 + MIR SINE MIR 95 188 -74 2560 244 55 22 chr20 17900070 17900973 -54252909 - HAL1 LINE L1 -386 2121 1147 7451 36 0 0 chr20 17901044 17902636 -54251246 - L1PA4 LINE L1 0 6155 4562 8923 25 0 0 chr20 17902649 17903698 -54250184 - L1P LINE L1 -1453 4693 3645 234 274 66 38 chr20 17903703 17903809 -54250073 - HAL1 LINE L1 -1601 906 798 516 318 101 16 chr20 17903932 17904190 -54249692 - HAL1 LINE L1 -1810 697 418 511 195 13 87 chr20 17904239 17904388 -54249494 - MER58C DNA MER1_type 0 215 78 601 246 60 96 chr20 17904447 17904813 -54249069 - HAL1 LINE L1 -2152 355 3 200 247 153 0 chr20 17906274 17906359 -54247523 + MER91A DNA MER1_type 64 161 -35 1350 220 37 24 chr20 17906444 17906853 -54247029 - L1ME3A LINE L1 -3 6167 5754 21 0 0 0 chr20 17906853 17906874 -54247008 + AT_rich Low_complexity Low_complexity 1 21 0 189 0 0 0 chr20 17907170 17907191 -54246691 + (T)n Simple_repeat Simple_repeat 1 21 0 2400 71 0 6 chr20 17907413 17907735 -54246147 + L1PA7 LINE L1 5834 6153 -1 2426 140 40 35 chr20 17908644 17909066 -54244816 - MSTC LTR MaLR -4 424 1 187 214 24 0 chr20 17909893 17909935 -54243947 - L3 LINE CR1 -1 1576 1534 2381 206 63 11 chr20 17909963 17910483 -54243399 + MLT1F1 LTR MaLR 19 565 -2 363 98 0 0 chr20 17911045 17911106 -54242776 + (CA)n Simple_repeat Simple_repeat 1 61 0 22 0 0 0 chr20 17911218 17911240 -54242642 + AT_rich Low_complexity Low_complexity 1 22 0 309 239 73 58 chr20 17917202 17917407 -54236475 - MER112 DNA MER1_type -1 259 52 622 247 103 8 chr20 17917498 17917741 -54236141 - L1MC4a LINE L1 -1959 5849 5584 2061 225 16 5 chr20 17917741 17918190 -54235692 - MER82 DNA MER2_type 0 653 200 30 45 0 0 chr20 17918444 17918488 -54235394 + AT_rich Low_complexity Low_complexity 1 44 0 2052 58 8 8 chr20 17918497 17918758 -54235124 + AluY SINE Alu 39 299 -12 714 231 17 6 chr20 17918760 17918933 -54234949 - MER82 DNA MER2_type -472 181 7 500 234 94 55 chr20 17918953 17919300 -54234582 - L1MC4a LINE L1 -743 5403 5190 1741 131 139 0 chr20 17919337 17919611 -54234271 + AluSx SINE Alu 1 312 0 186 369 46 23 chr20 17919834 17919964 -54233918 + MIR SINE MIR 2 134 -128 23 68 0 0 chr20 17920485 17920529 -54233353 + AT_rich Low_complexity Low_complexity 1 44 0 3855 202 90 60 chr20 17921272 17922500 -54231382 - L1MC4 LINE L1 0 8042 6779 2208 115 3 0 chr20 17922500 17922796 -54231086 + AluSq SINE Alu 1 297 -16 204 40 0 0 chr20 17922806 17922831 -54231051 + (TG)n Simple_repeat Simple_repeat 1 25 0 1115 144 72 0 chr20 17924479 17924674 -54229208 + MER3 DNA MER1_type 1 209 0 28 29 0 0 chr20 17925602 17925637 -54228245 + AT_rich Low_complexity Low_complexity 1 35 0 2071 237 69 34 chr20 17926218 17926989 -54226893 + L1MC4 LINE L1 7245 8042 0 209 302 19 94 chr20 17927335 17927441 -54226441 - L2 LINE L2 -4 3268 3171 188 270 130 20 chr20 17927646 17927746 -54226136 + MIR SINE MIR 35 145 -63 891 286 21 33 chr20 17928183 17928610 -54225272 + L1MCc LINE L1 20 441 -5982 5883 163 23 8 chr20 17929075 17931018 -54222864 + L1MA4A LINE L1 4295 6296 -7 1291 263 118 31 chr20 17931170 17932407 -54221475 + L1M4 LINE L1 2315 3853 -2293 4698 161 49 5 chr20 17932408 17933632 -54220250 + L1MB7 LINE L1 4905 6175 -9 1200 234 55 30 chr20 17933629 17933746 -54220136 + L1M4 LINE L1 3837 3950 -2196 * 2479 69 7 0 chr20 17933746 17934050 -54219832 + AluY SINE Alu 1 306 -5 1200 234 55 30 chr20 17934050 17934653 -54219229 + L1M4 LINE L1 3950 4771 -1375 2123 95 0 40 chr20 17934856 17935152 -54218730 + AluSc SINE Alu 1 284 -25 22 0 0 0 chr20 17935156 17935178 -54218704 + AT_rich Low_complexity Low_complexity 1 22 0 1724 166 10 24 chr20 17936103 17936393 -54217489 - AluJo SINE Alu -26 286 1 860 209 74 42 chr20 17936488 17936771 -54217111 + L1ME2 LINE L1 5867 6158 -6 1228 168 14 14 chr20 17936810 17937024 -54216858 - AluJo SINE Alu -10 302 89 330 283 115 9 chr20 17937048 17937161 -54216721 + MIR SINE MIR 12 136 -126 193 352 0 0 chr20 17939258 17939312 -54214570 + L2 LINE L2 3217 3270 -2 30 97 0 0 chr20 17939444 17939537 -54214345 + AT_rich Low_complexity Low_complexity 1 93 0 437 268 46 13 chr20 17939539 17939692 -54214190 + Charlie8 DNA MER1_type 132 289 -2128 3835 271 114 7 chr20 17940470 17941909 -54211973 - L2 LINE L2 -6 3307 1699 405 291 17 26 chr20 17941986 17942103 -54211779 - L2 LINE L2 -1155 2159 2044 384 347 24 42 chr20 17942863 17943030 -54210852 - MIR3 SINE MIR -12 196 33 220 352 48 32 chr20 17943175 17943300 -54210582 + MIR3 SINE MIR 15 141 -67 203 246 31 46 chr20 17944146 17944211 -54209671 - MIR3 SINE MIR -7 201 138 2278 97 7 7 chr20 17944713 17945022 -54208860 + AluSc SINE Alu 1 309 0 2428 67 0 7 chr20 17946086 17946383 -54207499 - AluY SINE Alu -16 295 1 1905 85 9 91 chr20 17946383 17946713 -54207169 - AluSx SINE Alu -9 303 1 2519 65 0 3 chr20 17948716 17949026 -54204856 - AluY SINE Alu -2 309 1 444 330 0 0 chr20 17949962 17950080 -54203802 + L2 LINE L2 3149 3266 -6 185 224 17 0 chr20 17950543 17950601 -54203281 + (TG)n Simple_repeat Simple_repeat 2 60 0 3865 141 31 14 chr20 17952902 17953223 -54200659 + L1PA15 LINE L1 5509 5823 -342 2290 92 23 7 chr20 17953223 17953527 -54200355 + AluSq SINE Alu 1 309 -4 3865 141 31 14 chr20 17953527 17953851 -54200031 + L1PA15 LINE L1 5823 6165 0 229 244 0 0 chr20 17954108 17954153 -54199729 + GA-rich Low_complexity Low_complexity 2 46 0 29 28 0 0 chr20 17954285 17954321 -54199561 + AT_rich Low_complexity Low_complexity 1 36 0 954 279 100 8 chr20 17954772 17955123 -54198759 + LTR16C LTR ERVL 109 491 0 365 234 43 0 chr20 17956717 17956811 -54197071 + L2 LINE L2 2365 2462 -852 522 256 80 35 chr20 17956811 17957279 -54196603 - MLT1H LTR MaLR 0 595 20 1086 240 149 24 chr20 17957285 17957849 -54196033 + L2 LINE L2 2459 3123 -190 368 297 66 0 chr20 17957864 17958046 -54195836 + L1M4 LINE L1 4834 5027 -1119 1916 161 3 0 chr20 17958061 17958347 -54195535 - AluJb SINE Alu -25 287 1 1834 232 129 48 chr20 17958378 17959175 -54194707 + L1M4b LINE L1 6 962 -5897 30603 107 10 55 chr20 17959184 17965638 -54188244 + L1PA7 LINE L1 12 6164 0 2235 223 61 53 chr20 17965645 17966064 -54187818 + L1M4b LINE L1 957 1371 -5767 2453 67 0 3 chr20 17966064 17966362 -54187520 + AluY SINE Alu 1 297 -14 2235 223 61 53 chr20 17966362 17967526 -54186356 + L1M4b LINE L1 1371 2687 -4451 655 269 56 69 chr20 17967557 17968092 -54185790 + L1MEc LINE L1 1735 2262 -4134 261 197 0 0 chr20 17968125 17968186 -54185696 + (TA)n Simple_repeat Simple_repeat 1 61 0 705 246 93 55 chr20 17968205 17968599 -54185283 - MLT2D LTR ERVL -34 486 27 4815 250 26 4 chr20 17968605 17969941 -54183941 + L1MEc LINE L1 2252 3617 -2598 1177 136 11 16 chr20 17969942 17970126 -54183756 - MLT1B LTR MaLR -207 183 1 1047 205 51 0 chr20 17970420 17970674 -54183208 - L1MDb LINE L1 -5192 1351 1085 * 1114 213 33 0 chr20 17970673 17970884 -54182998 - L1MDb LINE L1 -6314 226 9 2172 136 0 0 chr20 17971253 17971548 -54182334 - AluSx SINE Alu -17 295 1 309 167 143 36 chr20 17972149 17972233 -54181649 + LTR16C LTR ERVL 150 242 -249 228 272 86 0 chr20 17972336 17972417 -54181465 + L2 LINE L2 3225 3312 -1 192 111 0 0 chr20 17973808 17973844 -54180038 + (TG)n Simple_repeat Simple_repeat 2 37 0 1703 306 121 25 chr20 17974288 17975480 -54178402 + L2 LINE L2 2004 3312 -1 2525 233 88 46 chr20 17976837 17977624 -54176258 - MER21B LTR ERV1 -1 862 43 278 257 43 14 chr20 17977626 17977696 -54176186 - MER21B LTR ERV1 -773 90 19 241 256 47 23 chr20 17977694 17977780 -54176102 - MER21B LTR ERV1 -757 106 19 * 315 243 81 0 chr20 17977797 17977871 -54176011 - MER21B LTR ERV1 -758 105 26 270 0 0 0 chr20 17977873 17977903 -54175979 + (TA)n Simple_repeat Simple_repeat 2 31 0 457 188 197 8 chr20 17977919 17978022 -54175860 - L1ME1 LINE L1 -151 6015 5886 3714 58 0 7 chr20 17978022 17978473 -54175409 - LTR7 LTR ERV1 -2 448 1 457 188 197 8 chr20 17978473 17978486 -54175396 - L1ME1 LINE L1 -280 5886 5877 2378 87 46 14 chr20 17978486 17978853 -54175029 - HERVH LTR ERV1 -13 7700 7322 1374 132 18 14 chr20 17978851 17979070 -54174812 - HERVH LTR ERV1 -1894 5819 5600 * 4197 137 20 3 chr20 17979071 17979722 -54174160 - HERVH LTR ERV1 -2564 5149 4488 3312 119 6 6 chr20 17979724 17980226 -54173656 - HERVH LTR ERV1 -3720 3993 3492 949 140 7 0 chr20 17980216 17980366 -54173516 - HERVH LTR ERV1 -4423 3290 3140 * 8452 88 15 16 chr20 17980345 17981569 -54172313 - HERVH LTR ERV1 -4718 2995 1773 2910 132 46 61 chr20 17981564 17982379 -54171503 - HERVH LTR ERV1 -6946 767 1 * 3669 58 0 7 chr20 17982381 17982832 -54171050 - LTR7 LTR ERV1 -2 448 1 1060 216 94 25 chr20 17982843 17983162 -54170720 - L1ME1 LINE L1 -273 5891 5551 212 259 266 19 chr20 17983544 17983702 -54170180 + L2 LINE L2 3117 3313 0 858 279 43 8 chr20 17983793 17984051 -54169831 - MER110 LTR ERV1 0 491 225 283 185 173 49 chr20 17984167 17984248 -54169634 - MER110A LTR ERV1 -298 170 80 2103 284 138 26 chr20 17985531 17986932 -54166950 - HAL1 LINE L1 -171 2336 780 232 241 80 18 chr20 17987285 17987397 -54166485 - MER113 DNA MER1_type? -385 136 18 1726 159 10 45 chr20 17987445 17987754 -54166128 - AluJo SINE Alu -11 301 4 2068 124 7 0 chr20 17988246 17988544 -54165338 - AluSx SINE Alu -12 300 1 1045 195 24 10 chr20 17988682 17988887 -54164995 - MER3 DNA MER1_type -1 208 1 2739 234 92 13 chr20 17988931 17989695 -54164187 - L1ME1 LINE L1 -18 6148 5325 27 61 0 15 chr20 17989705 17989745 -54164137 + AT_rich Low_complexity Low_complexity 1 41 -24 1502 158 4 49 chr20 17989745 17990011 -54163871 + AluJo SINE Alu 35 288 -24 27 61 0 15 chr20 17990011 17990036 -54163846 + AT_rich Low_complexity Low_complexity 41 65 0 482 194 111 7 chr20 17990051 17990195 -54163687 - L1ME1 LINE L1 -840 5306 5148 1523 247 49 33 chr20 17990195 17990555 -54163327 - L1ME1 LINE L1 -1380 4766 4392 1625 185 63 0 chr20 17990555 17990841 -54163041 - AluJb SINE Alu -6 306 3 1523 247 49 33 chr20 17990841 17991054 -54162828 - L1ME1 LINE L1 -1754 4392 4184 701 184 159 75 chr20 17992528 17992729 -54161153 - MER20 DNA MER1_type -1 218 1 2304 93 0 10 chr20 17992854 17993155 -54160727 - AluSx SINE Alu -14 298 1 231 36 0 0 chr20 17994767 17994795 -54159087 + (T)n Simple_repeat Simple_repeat 1 28 0 186 43 0 0 chr20 17996411 17996434 -54157448 + (TG)n Simple_repeat Simple_repeat 1 23 0 230 28 0 56 chr20 17997113 17997149 -54156733 + (CGGGGG)n Simple_repeat Simple_repeat 2 35 0 1360 193 141 75 chr20 17998554 17999036 -54154846 + MLT1H LTR MaLR 9 522 -27 489 281 98 15 chr20 17999158 17999361 -54154521 - MIR SINE MIR -31 231 12 257 305 219 0 chr20 17999721 17999826 -54154056 + MIR SINE MIR 20 147 -115 973 152 15 20 chr20 17999991 18000188 -54153694 + L1MA4 LINE L1 6105 6300 0 438 274 161 66 chr20 18000281 18000660 -54153222 - MLT1L LTR MaLR -1 614 96 225 211 0 0 chr20 18001745 18001802 -54152080 + (TG)n Simple_repeat Simple_repeat 2 58 0 4289 113 57 0 chr20 18002159 18002759 -54151123 + MER41B LTR ERV1 1 634 -1 189 364 105 25 chr20 18003409 18003571 -54150311 - L3b LINE CR1 -3 1580 1406 782 251 146 14 chr20 18003994 18004213 -54149669 - MER45C DNA AcHobo 0 953 706 1092 196 60 16 chr20 18004290 18004540 -54149342 - MER45C DNA AcHobo -692 261 1 1084 238 106 36 chr20 18004579 18005134 -54148748 - HAL1 LINE L1 -991 1516 923 718 315 151 28 chr20 18005209 18005341 -54148541 - HAL1 LINE L1 -1703 804 690 390 21 0 0 chr20 18005341 18005388 -54148494 + (TG)n Simple_repeat Simple_repeat 1 47 0 718 315 151 28 chr20 18005388 18005970 -54147912 - HAL1 LINE L1 -1817 690 2 4839 185 89 16 chr20 18007527 18008491 -54145391 + MER45B DNA AcHobo 4 1038 -2 234 308 0 0 chr20 18008858 18008910 -54144972 - L2 LINE L2 -73 3199 3148 252 49 24 73 chr20 18008986 18009027 -54144855 - MLT1K LTR MaLR 0 588 550 4448 232 75 32 chr20 18009509 18010458 -54143424 + L1ME1 LINE L1 2944 3850 -2296 2034 138 7 7 chr20 18010458 18010754 -54143128 + AluSx SINE Alu 1 296 -16 4448 232 75 32 chr20 18010754 18011175 -54142707 + L1ME1 LINE L1 3850 4385 -1761 2145 156 42 39 chr20 18011175 18011560 -54142322 - MLT1B LTR MaLR 0 390 5 4448 232 75 32 chr20 18011560 18011665 -54142217 + L1ME1 LINE L1 4385 4484 -1662 27 62 0 0 chr20 18011685 18011733 -54142149 + AT_rich Low_complexity Low_complexity 1 48 0 10104 123 9 3 chr20 18011737 18014001 -54139881 - L1PA11 LINE L1 -5 6169 3889 2749 211 21 74 chr20 18014001 18014756 -54139126 + L1ME1 LINE L1 5302 6016 -150 386 308 0 0 chr20 18015812 18015903 -54137979 + MIR3 SINE MIR 93 183 -25 790 226 25 95 chr20 18018634 18018877 -54135005 - MIR SINE MIR -14 248 23 339 238 0 82 chr20 18019023 18019145 -54134737 - L2 LINE L2 -2 3311 3200 1163 251 132 54 chr20 18019456 18019499 -54134383 + MLT1J LTR MaLR 70 108 -403 1950 151 0 10 chr20 18019499 18019798 -54134084 - AluSx SINE Alu -16 296 1 1163 251 132 54 chr20 18019798 18020164 -54133718 + MLT1J LTR MaLR 108 511 0 240 250 14 0 chr20 18020214 18020286 -54133596 + LTR67 LTR ERVL 466 538 -19 8192 205 52 31 chr20 18021515 18022551 -54131331 - L1MC1 LINE L1 -5 6608 5595 243 0 0 0 chr20 18022551 18022578 -54131304 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 8192 205 52 31 chr20 18022578 18027060 -54126822 - L1MC1 LINE L1 -1018 5595 739 2452 137 25 18 chr20 18027060 18027453 -54126429 - MER57A LTR ERV1 0 403 8 231 283 17 0 chr20 18027473 18027533 -54126349 - L1MC1 LINE L1 -6347 79 19 230 243 174 23 chr20 18027824 18027971 -54125911 + MIR SINE MIR 6 166 -42 7876 167 28 16 chr20 18028647 18029428 -54124454 - L1MA7 LINE L1 -1 6290 5520 628 12 25 0 chr20 18029428 18029509 -54124373 + (TCTA)n Simple_repeat Simple_repeat 4 86 0 2427 83 0 0 chr20 18029514 18029804 -54124078 - AluSq SINE Alu -23 290 1 7876 167 28 16 chr20 18029804 18031416 -54122466 - L1MA7 LINE L1 -774 5517 3866 1991 174 6 14 chr20 18031634 18031991 -54121891 - MLT1A1 LTR MaLR 0 365 12 285 286 9 9 chr20 18032072 18032177 -54121705 - L1MC/D LINE L1 -354 5810 5711 1612 256 60 17 chr20 18032666 18033146 -54120736 + L1ME3A LINE L1 5521 6021 -149 504 187 157 8 chr20 18033166 18033300 -54120582 - L1ME1 LINE L1 -2 6164 6011 567 164 0 82 chr20 18033300 18033434 -54120448 + L1ME3A LINE L1 6043 6165 -5 228 122 0 0 chr20 18034110 18034151 -54119731 + (T)n Simple_repeat Simple_repeat 1 41 0 191 36 36 0 chr20 18034192 18034220 -54119662 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 388 249 179 0 chr20 18035345 18035518 -54118364 + MER5C DNA MER1_type 1 204 -120 21 71 0 0 chr20 18035659 18035701 -54118181 + AT_rich Low_complexity Low_complexity 1 42 0 1351 262 23 67 chr20 18035736 18036217 -54117665 - LTR16C LTR ERVL 0 491 32 818 258 128 34 chr20 18036429 18036836 -54117046 + MLT1J2 LTR MaLR 3 447 -3 327 252 271 0 chr20 18036868 18037019 -54116863 + L2 LINE L2 3122 3313 0 186 316 0 0 chr20 18037029 18037086 -54116796 - MIR SINE MIR -160 102 46 396 252 37 30 chr20 18037511 18037646 -54116236 + MIR SINE MIR 18 153 -109 362 302 13 13 chr20 18038926 18039075 -54114807 - L3 LINE CR1 -106 1471 1323 2077 135 7 0 chr20 18039229 18039517 -54114365 + AluSx SINE Alu 3 292 -20 2213 97 0 55 chr20 18042300 18042630 -54111252 + AluSx SINE Alu 1 312 0 778 294 40 43 chr20 18042839 18043165 -54110717 + MER102b DNA MER1_type 5 329 -12 960 206 79 9 chr20 18043203 18043430 -54110452 - LTR16C LTR ERVL 0 491 249 2540 161 77 82 chr20 18043430 18043700 -54110182 + MER92B LTR ERV1 2 272 -364 2031 133 0 0 chr20 18043700 18043978 -54109904 - AluSg SINE Alu -32 278 1 2540 161 77 82 chr20 18043978 18044340 -54109542 + MER92B LTR ERV1 272 631 -5 339 289 147 15 chr20 18044344 18044548 -54109334 - LTR16C LTR ERVL -250 241 11 526 243 88 92 chr20 18044767 18045146 -54108736 + LTR16B LTR ERVL 1 449 -15 538 255 26 13 chr20 18045771 18045924 -54107958 + MIR SINE MIR 38 192 -70 457 224 9 9 chr20 18046029 18046136 -54107746 + LTR33 LTR ERVL 415 521 0 365 251 112 58 chr20 18046451 18046674 -54107208 + Charlie8 DNA MER1_type 29 265 -2152 2443 100 0 0 chr20 18046712 18047022 -54106860 - AluSq SINE Alu -1 312 3 2434 60 0 38 chr20 18047487 18047801 -54106081 - AluY SINE Alu -9 302 1 469 279 94 10 chr20 18048671 18048872 -54105010 + MIR SINE MIR 2 219 -43 774 284 37 8 chr20 18049753 18049996 -54103886 + MIR SINE MIR 12 261 -1 2453 60 0 29 chr20 18050002 18050347 -54103535 - AluY SINE Alu 0 337 2 369 284 21 0 chr20 18050934 18051029 -54102853 - MER58C DNA MER1_type 0 215 119 279 79 0 0 chr20 18051029 18051067 -54102815 + (TCC)n Simple_repeat Simple_repeat 1 38 0 282 241 241 19 chr20 18051084 18051192 -54102690 - MER58C DNA MER1_type -83 132 1 2279 92 0 10 chr20 18051642 18051934 -54101948 + AluSg SINE Alu 13 301 -9 837 210 101 33 chr20 18052585 18052925 -54100957 + MLT1H1 LTR MaLR 191 555 0 502 292 34 61 chr20 18052968 18053232 -54100650 - L2 LINE L2 -3 3310 3054 2415 114 25 11 chr20 18053239 18053598 -54100284 + THE1B LTR MaLR 1 364 0 341 238 171 54 chr20 18055046 18055392 -54098490 + MLT1H LTR MaLR 119 516 -33 1799 179 0 28 chr20 18055392 18055711 -54098171 - AluJo SINE Alu -2 310 1 341 238 171 54 chr20 18055711 18055750 -54098132 + MLT1H LTR MaLR 516 549 0 552 218 39 19 chr20 18056579 18056735 -54097147 - MIR SINE MIR -69 193 35 911 137 0 26 chr20 18057536 18057689 -54096193 + FRAM SINE Alu 26 174 -2 186 281 18 0 chr20 18057919 18057976 -54095906 + MER5A DNA MER1_type 132 189 0 238 208 0 19 chr20 18058306 18058359 -54095523 - MER5A DNA MER1_type -2 187 136 769 246 0 11 chr20 18058433 18058612 -54095270 - MER5B DNA MER1_type 0 178 2 692 156 97 13 chr20 18058634 18058788 -54095094 - MER5A DNA MER1_type -22 167 1 679 251 154 9 chr20 18059079 18059306 -54094576 + MIR SINE MIR 2 261 -1 233 232 138 80 chr20 18059458 18059596 -54094286 + L2 LINE L2 3125 3270 -2 1233 263 92 11 chr20 18059865 18060245 -54093637 + MLT1J2 LTR MaLR 6 416 -34 354 214 120 60 chr20 18061335 18061452 -54092430 - MLT1H1 LTR MaLR -37 518 395 250 241 81 11 chr20 18061507 18061594 -54092288 - MIR SINE MIR 0 262 170 759 249 179 56 chr20 18061608 18062054 -54091828 + MLT1H1 LTR MaLR 27 527 -28 408 252 110 8 chr20 18062064 18062191 -54091691 - MIR SINE MIR -122 140 1 181 295 95 9 chr20 18064798 18064903 -54088979 - MIR SINE MIR -63 145 32 415 227 0 170 chr20 18064977 18065224 -54088658 - MIR SINE MIR -24 238 34 31 0 0 0 chr20 18066019 18066050 -54087832 + GC_rich Low_complexity Low_complexity 1 31 0 1640 203 0 4 chr20 18067240 18067521 -54086361 + AluJo SINE Alu 1 280 -32 351 0 0 0 chr20 18067521 18067560 -54086322 + (TAAAA)n Simple_repeat Simple_repeat 2 40 0 1679 191 0 14 chr20 18068697 18068990 -54084892 + AluJb SINE Alu 1 289 -23 244 336 12 52 chr20 18069133 18069307 -54084575 + MIR SINE MIR 24 189 -73 238 167 42 0 chr20 18069686 18069734 -54084148 + T-rich Low_complexity Low_complexity 1 50 0 545 262 28 0 chr20 18069735 18069876 -54084006 + MER104 DNA Tc2 32 176 -4 509 192 8 0 chr20 18070742 18070867 -54083015 + (TCCA)n Simple_repeat Simple_repeat 1 126 0 642 311 85 35 chr20 18070876 18071301 -54082581 - L2 LINE L2 -40 3273 2828 994 163 7 0 chr20 18071856 18072009 -54081873 - FRAM SINE Alu -23 153 1 392 179 0 12 chr20 18072371 18072455 -54081427 + GA-rich Low_complexity Low_complexity 80 162 0 840 121 11 22 chr20 18072468 18072650 -54081232 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 535 303 73 51 chr20 18074515 18074927 -54078955 + MLT1J LTR MaLR 1 421 -90 424 38 0 0 chr20 18075036 18075089 -54078793 - MADE1 DNA Mariner -27 53 1 650 281 25 10 chr20 18075113 18075316 -54078566 + L1MC4 LINE L1 6797 7002 -1040 226 344 10 0 chr20 18079124 18079220 -54074662 + MIR SINE MIR 17 113 -95 2278 98 0 35 chr20 18079314 18079631 -54074251 - AluSq SINE Alu -7 306 1 281 301 58 0 chr20 18079694 18079797 -54074085 + MLT1H LTR MaLR 197 305 -244 347 281 10 0 chr20 18079904 18080000 -54073882 + MLT1H LTR MaLR 453 549 0 251 227 91 15 chr20 18080775 18080841 -54073041 - L2 LINE L2 -4 3268 3198 1103 212 71 67 chr20 18080857 18081323 -54072559 + LTR37B LTR ERV1 1 468 0 2565 69 7 0 chr20 18081458 18081763 -54072119 - AluSx SINE Alu -5 307 1 584 240 36 53 chr20 18082238 18082463 -54071419 - LTR33 LTR ERVL 0 521 301 652 255 14 0 chr20 18082489 18082634 -54071248 - LTR33 LTR ERVL -361 160 14 243 265 112 0 chr20 18082684 18082782 -54071100 - MIR SINE MIR -43 219 111 1682 119 0 9 chr20 18083304 18083531 -54070351 - AluSq SINE Alu -88 225 1 190 180 100 20 chr20 18083635 18083685 -54070197 + MIR SINE MIR 91 144 -118 236 167 0 36 chr20 18083940 18083995 -54069887 - MIR SINE MIR -99 163 113 2334 118 0 0 chr20 18084345 18084650 -54069232 - AluSx SINE Alu -7 305 1 280 274 27 0 chr20 18084970 18085043 -54068839 + MER91A DNA MER1_type 8 82 -114 237 329 77 19 chr20 18085142 18085297 -54068585 + L2 LINE L2 2945 3108 -164 719 299 34 24 chr20 18085520 18085848 -54068034 + L2 LINE L2 2982 3312 -1 214 269 0 23 chr20 18086406 18086506 -54067376 + (TA)n Simple_repeat Simple_repeat 2 99 -73 1954 107 13 63 chr20 18086506 18086828 -54067054 - AluSx SINE Alu 0 307 1 214 269 0 23 chr20 18086828 18086901 -54066981 + (TA)n Simple_repeat Simple_repeat 99 172 0 696 236 34 0 chr20 18087035 18087213 -54066669 + MER5A DNA MER1_type 6 189 0 2247 101 0 17 chr20 18087997 18088295 -54065587 - AluSx SINE Alu -19 293 1 373 311 74 16 chr20 18089986 18090108 -54063774 - L2 LINE L2 0 3272 3144 429 223 16 33 chr20 18090121 18090242 -54063640 + MER5B DNA MER1_type 54 172 -6 558 29 0 0 chr20 18090925 18090993 -54062889 + (CAAAA)n Simple_repeat Simple_repeat 3 70 0 378 0 0 0 chr20 18093204 18093246 -54060636 + (CA)n Simple_repeat Simple_repeat 2 43 0 2207 99 17 3 chr20 18093515 18093809 -54060073 - AluSq SINE Alu -14 299 2 231 292 112 11 chr20 18094065 18094154 -54059728 + MIR SINE MIR 47 144 -64 2255 99 3 20 chr20 18094476 18094778 -54059104 - AluSx SINE Alu -15 297 1 210 111 89 0 chr20 18095036 18095081 -54058801 + (AAATG)n Simple_repeat Simple_repeat 4 52 0 920 245 71 41 chr20 18095191 18095485 -54058397 + MLT1E LTR MaLR 1 303 -290 726 196 0 77 chr20 18095478 18095646 -54058236 + MLT1E LTR MaLR 439 593 0 * 272 88 0 0 chr20 18097404 18097438 -54056444 + MLT1I LTR MaLR 127 160 -249 359 136 51 0 chr20 18097450 18097509 -54056373 + MLT1J1 LTR MaLR 265 326 -120 340 274 21 0 chr20 18097510 18097605 -54056277 - MIR SINE MIR -78 130 34 827 230 94 5 chr20 18097661 18097874 -54056008 + MIR SINE MIR 10 241 -21 1665 317 143 25 chr20 18098446 18099785 -54054097 + L2 LINE L2 586 2082 -1232 188 222 0 0 chr20 18099811 18099856 -54054026 + L2 LINE L2 2304 2348 -966 517 326 180 16 chr20 18099891 18100621 -54053261 + L2 LINE L2 2448 3313 0 1978 218 89 4 chr20 18103049 18103554 -54050328 - L1ME3A LINE L1 -13 6157 5610 599 52 39 0 chr20 18103555 18103632 -54050250 + THE1A LTR MaLR 1 80 -275 5278 74 5 0 chr20 18103637 18104297 -54049585 + THE1A-int LTR MaLR 918 1580 0 904 112 8 0 chr20 18104297 18104422 -54049460 + THE1A LTR MaLR 1 126 -229 2229 110 0 3 chr20 18104544 18104836 -54049046 + AluSc SINE Alu 4 294 -15 279 311 95 20 chr20 18105263 18105411 -54048471 - MIR SINE MIR -79 183 25 233 180 10 56 chr20 18105412 18105487 -54048395 + MLT1I LTR MaLR 104 149 -260 233 274 0 0 chr20 18105786 18105848 -54048034 - MER5A DNA MER1_type 0 189 128 5590 128 21 9 chr20 18105851 18106790 -54047092 + L1PB4 LINE L1 5215 6152 -4 358 270 20 10 chr20 18106804 18106904 -54046978 - MER5A DNA MER1_type -80 109 9 2385 93 3 0 chr20 18107149 18107449 -54046433 - AluSp SINE Alu -11 302 2 1688 225 101 17 chr20 18108064 18108613 -54045269 + L1ME1 LINE L1 5582 6334 0 767 234 64 0 chr20 18109638 18109826 -54044056 - LTR16C LTR ERVL -3 488 289 237 65 0 0 chr20 18109988 18110019 -54043863 + (TTTTC)n Simple_repeat Simple_repeat 5 35 0 362 341 41 52 chr20 18110264 18110631 -54043251 + L3b LINE CR1 1114 1476 -107 1998 241 33 10 chr20 18111076 18111595 -54042287 + L1ME2 LINE L1 5634 6164 0 333 217 9 19 chr20 18111608 18111714 -54042168 + GA-rich Low_complexity Low_complexity 4 108 0 513 313 102 31 chr20 18111982 18112461 -54041421 + HAL1 LINE L1 1214 1726 -781 2318 99 0 26 chr20 18112491 18112804 -54041078 + AluSx SINE Alu 1 305 -7 2520 63 0 0 chr20 18112956 18113257 -54040625 + AluY SINE Alu 1 301 -10 2314 97 0 0 chr20 18113261 18113550 -54040332 + AluY SINE Alu 1 289 -22 330 279 50 19 chr20 18113569 18113730 -54040152 + L1M4 LINE L1 2247 2412 -3734 1433 240 88 49 chr20 18113813 18114325 -54039557 + MLT1H LTR MaLR 18 549 0 229 151 38 0 chr20 18115286 18115339 -54038543 + (TA)n Simple_repeat Simple_repeat 1 55 0 720 196 65 54 chr20 18115499 18115611 -54038271 + MIR SINE MIR 77 193 -69 2603 47 0 25 chr20 18115611 18115930 -54037952 + AluY SINE Alu 1 311 0 720 196 65 54 chr20 18115930 18116001 -54037881 + MIR SINE MIR 193 262 0 581 207 58 29 chr20 18117263 18117437 -54036445 + MIR SINE MIR 82 260 -2 2200 73 22 0 chr20 18117543 18117881 -54036001 - AluSx SINE Alu 0 346 3 204 67 0 0 chr20 18118937 18118967 -54034915 + (CAG)n Simple_repeat Simple_repeat 2 31 0 29 0 0 0 chr20 18119012 18119041 -54034841 + GC_rich Low_complexity Low_complexity 1 29 0 24 77 0 0 chr20 18119120 18119172 -54034710 + GC_rich Low_complexity Low_complexity 1 52 0 234 62 0 0 chr20 18119179 18119211 -54034671 + (CCG)n Simple_repeat Simple_repeat 3 34 0 591 40 0 0 chr20 18119477 18119551 -54034331 + (GGA)n Simple_repeat Simple_repeat 1 74 0 181 216 27 0 chr20 18122233 18122270 -54031612 + L2 LINE L2 3123 3160 -112 1996 134 6 34 chr20 18122475 18122796 -54031086 - AluSx SINE Alu 0 312 1 599 213 63 45 chr20 18123401 18123622 -54030260 - L1MC5 LINE L1 -36 7925 7701 738 246 175 46 chr20 18123736 18124130 -54029752 + MLT1J2 LTR MaLR 1 445 -5 801 244 52 5 chr20 18124152 18124365 -54029517 - MER58A DNA MER1_type -1 223 1 237 156 78 111 chr20 18124445 18124535 -54029347 + MIR SINE MIR 101 187 -75 294 224 282 0 chr20 18124609 18124694 -54029188 + L2 LINE L2 3204 3312 -1 495 253 73 27 chr20 18125479 18125629 -54028253 - MIR3 SINE MIR -29 179 23 526 190 203 0 chr20 18125723 18125881 -54028001 - L1ME3A LINE L1 -105 6065 5876 396 254 282 6 chr20 18125965 18126146 -54027736 + MLT1H LTR MaLR 1 231 -318 348 77 0 0 chr20 18126148 18126200 -54027682 + (TC)n Simple_repeat Simple_repeat 1 52 0 396 0 0 0 chr20 18126200 18126244 -54027638 + (TG)n Simple_repeat Simple_repeat 1 44 0 476 258 202 49 chr20 18126248 18126515 -54027367 + MLT1H LTR MaLR 224 531 -18 1168 242 31 50 chr20 18126534 18127010 -54026872 - L1MC4 LINE L1 -184 7858 7392 373 245 0 59 chr20 18128320 18128422 -54025460 - MLT1J2 LTR MaLR 0 450 355 377 250 0 19 chr20 18128576 18128680 -54025202 - MLT1J2 LTR MaLR -317 133 32 286 284 0 20 chr20 18128788 18128890 -54024992 - MER58 DNA MER1_type -3 2417 2318 379 203 0 0 chr20 18128903 18128977 -54024905 - MER58 DNA MER1_type -243 98 25 29 47 0 0 chr20 18129967 18130010 -54023872 + AT_rich Low_complexity Low_complexity 1 43 0 288 0 0 0 chr20 18130115 18130147 -54023735 + (CA)n Simple_repeat Simple_repeat 2 33 0 281 212 71 20 chr20 18130261 18130360 -54023522 - L1ME3A LINE L1 -275 5846 5743 1581 236 49 25 chr20 18130414 18130901 -54022981 + L1ME3 LINE L1 5657 6155 -7 225 209 38 48 chr20 18131462 18131567 -54022315 - MLT1J2 LTR MaLR -22 428 325 1436 255 134 16 chr20 18131816 18132307 -54021575 - MLT1H LTR MaLR 0 549 1 1623 163 140 93 chr20 18132905 18133397 -54020485 + MLT2B2 LTR ERVL 1 515 0 345 274 160 50 chr20 18133397 18133616 -54020266 + MLT1H LTR MaLR 133 375 -174 549 292 95 43 chr20 18133897 18134243 -54019639 + MLT1J2 LTR MaLR 23 386 -64 23 33 0 0 chr20 18134243 18134273 -54019609 + AT_rich Low_complexity Low_complexity 1 30 0 282 190 38 13 chr20 18134273 18134352 -54019530 + MLT1J2 LTR MaLR 368 448 -2 470 278 112 14 chr20 18134703 18134980 -54018902 + LTR16C LTR ERVL 88 391 -100 1334 220 8 47 chr20 18135014 18135373 -54018509 + MLT1A1 LTR MaLR 21 365 0 392 302 133 19 chr20 18135380 18135693 -54018189 - L2 LINE L2 -261 3052 2697 1100 98 0 0 chr20 18136068 18136211 -54017671 + AluSg/x SINE Alu 143 285 -25 222 91 0 0 chr20 18136211 18136244 -54017638 + (TA)n Simple_repeat Simple_repeat 1 33 0 21 57 0 0 chr20 18137167 18137202 -54016680 + AT_rich Low_complexity Low_complexity 1 35 0 498 234 85 7 chr20 18137462 18137603 -54016279 + MIR SINE MIR 108 259 -3 198 295 0 49 chr20 18137604 18137665 -54016217 + L2 LINE L2 3205 3262 -10 2173 155 0 54 chr20 18137766 18138192 -54015690 + MER57A LTR ERV1 1 403 0 1481 221 62 26 chr20 18138225 18138645 -54015237 - MER63B DNA MER1_type -1 435 1 2302 84 0 3 chr20 18138712 18139009 -54014873 + AluSg SINE Alu 2 297 -13 502 319 50 21 chr20 18139338 18139617 -54014265 + L2 LINE L2 2456 2742 -572 228 354 59 29 chr20 18139713 18139922 -54013960 + MIR SINE MIR 31 261 -1 270 160 0 0 chr20 18140064 18140114 -54013768 + T-rich Low_complexity Low_complexity 2 51 0 202 260 55 41 chr20 18141244 18141317 -54012565 + L2 LINE L2 3170 3243 -70 237 145 48 0 chr20 18141353 18141415 -54012467 + GA-rich Low_complexity Low_complexity 1 65 0 1717 187 11 0 chr20 18141561 18142003 -54011879 + AluJo SINE Alu 1 445 0 451 86 14 0 chr20 18142143 18142213 -54011669 + L1MB1 LINE L1 6082 6152 -37 1459 194 19 16 chr20 18142213 18142528 -54011354 + MLT1A1 LTR MaLR 1 316 -49 686 213 72 0 chr20 18143979 18144186 -54009696 - Charlie5 DNA MER1_type -54 2558 2337 260 237 0 0 chr20 18144181 18144240 -54009642 - Charlie5 DNA MER1_type -2553 59 1 * 312 250 107 0 chr20 18144263 18144347 -54009535 - L2 LINE L2 -299 3014 2922 1030 292 58 7 chr20 18145036 18145468 -54008414 - LTR16C LTR ERVL 0 491 38 344 62 0 0 chr20 18145580 18145628 -54008254 - MADE1 DNA Mariner 0 80 33 438 20 0 0 chr20 18146169 18146220 -54007662 + (CA)n Simple_repeat Simple_repeat 2 52 0 653 288 26 76 chr20 18146792 18147215 -54006667 + MLT1J LTR MaLR 110 511 0 1226 206 69 33 chr20 18147442 18147864 -54006018 - L1MCb LINE L1 -3947 2617 2181 1051 176 33 107 chr20 18147910 18148182 -54005700 + AluJo SINE Alu 1 252 -60 209 108 0 27 chr20 18148188 18148225 -54005657 + (TG)n Simple_repeat Simple_repeat 1 36 0 1379 194 32 25 chr20 18148225 18148509 -54005373 - AluJo SINE Alu -26 286 1 688 195 63 20 chr20 18148512 18148721 -54005161 - L1MCb LINE L1 -4541 2023 1830 711 148 20 10 chr20 18148723 18148857 -54005025 - MSTD LTR MaLR -8 388 249 6444 158 15 20 chr20 18148876 18150471 -54003411 - L1MA5 LINE L1 -6 6294 4693 5366 129 11 5 chr20 18150471 18151574 -54002308 - L1PA16 LINE L1 -15 6151 5026 2789 128 14 0 chr20 18151574 18152002 -54001880 - MER57B LTR ERV1 0 434 1 6444 158 15 20 chr20 18152002 18152672 -54001210 - L1MA5 LINE L1 -1605 4695 4029 262 214 76 116 chr20 18152674 18152890 -54000992 - MSTD LTR MaLR -162 212 1 2858 216 62 58 chr20 18152890 18153006 -54000876 - L1MCb LINE L1 -4847 1717 1603 2274 86 48 0 chr20 18153006 18153296 -54000586 - AluSc SINE Alu -5 304 1 2858 216 62 58 chr20 18153296 18154921 -53998961 - L1MCb LINE L1 -4961 1603 3 248 237 34 0 chr20 18256247 18256306 -53897576 - MER94 DNA DNA 0 134 74 265 257 0 60 chr20 18257094 18257406 -53896476 + (CATA)n Simple_repeat Simple_repeat 1 293 0 312 354 55 30 chr20 18258169 18258333 -53895549 + L2 LINE L2 3100 3267 -5 7690 47 6 6 chr20 18258616 18259693 -53894189 - L1PA5 LINE L1 -3 6151 5073 1517 95 27 27 chr20 18259948 18260170 -53893712 + MER30 DNA MER1_type 2 223 -7 643 160 101 17 chr20 18260233 18260352 -53893530 - FLAM_C SINE Alu -13 130 2 28 0 0 0 chr20 18260504 18260532 -53893350 + AT_rich Low_complexity Low_complexity 1 28 0 277 149 43 43 chr20 18260938 18261032 -53892850 + (CTATA)n Simple_repeat Simple_repeat 2 95 0 38 39 0 0 chr20 18261844 18261896 -53891986 + AT_rich Low_complexity Low_complexity 1 52 0 25 51 0 0 chr20 18262114 18262153 -53891729 + AT_rich Low_complexity Low_complexity 1 39 0 2243 65 282 6 chr20 18263788 18264139 -53889743 - LTR7 LTR ERV1 -2 448 1 2475 92 45 18 chr20 18264139 18264519 -53889363 - HERVH LTR ERV1 0 7713 7324 1347 139 17 38 chr20 18264519 18264756 -53889126 - HERVH LTR ERV1 -1894 5819 5588 * 4347 151 0 1 chr20 18264736 18265399 -53888483 - HERVH LTR ERV1 -2564 5149 4488 6361 83 2 2 chr20 18265401 18266255 -53887627 - HERVH LTR ERV1 -3720 3993 3140 * 20805 96 6 24 chr20 18266234 18269285 -53884597 - HERVH LTR ERV1 -4718 2995 1 2144 86 282 6 chr20 18269287 18269638 -53884244 - LTR7 LTR ERV1 -2 448 1 1170 247 75 29 chr20 18269677 18270061 -53883821 + L1ME3A LINE L1 5768 6169 -1 1844 203 25 11 chr20 18270610 18270970 -53882912 - MLT1A1 LTR MaLR 0 365 1 188 315 0 0 chr20 18271067 18271121 -53882761 + MIR SINE MIR 13 66 -196 408 318 104 65 chr20 18271458 18271861 -53882021 + L2 LINE L2 2811 3229 -43 1443 208 42 66 chr20 18273206 18273586 -53880296 - MLT1A2 LTR MaLR 0 374 4 888 264 277 5 chr20 18273752 18274146 -53879736 + LTR33 LTR ERVL 1 501 -20 241 280 13 0 chr20 18274384 18274459 -53879423 + (TAA)n Simple_repeat Simple_repeat 1 76 0 304 309 25 37 chr20 18274477 18274639 -53879243 - MIR SINE MIR -50 212 53 180 269 0 39 chr20 18275820 18275872 -53878010 - L2 LINE L2 -95 3218 3169 192 125 0 0 chr20 18275878 18275910 -53877972 + (CA)n Simple_repeat Simple_repeat 1 32 0 440 280 126 6 chr20 18277197 18277372 -53876510 + MIR SINE MIR 53 248 -14 31 26 0 0 chr20 18277451 18277489 -53876393 + AT_rich Low_complexity Low_complexity 1 38 0 212 130 22 0 chr20 18277492 18277538 -53876344 + (TATAA)n Simple_repeat Simple_repeat 2 48 0 549 278 132 110 chr20 18278215 18278806 -53875076 + L1MEd LINE L1 114 717 -5488 302 328 25 17 chr20 18278809 18278928 -53874954 + L1MEd LINE L1 1571 1690 -4706 310 267 45 102 chr20 18279291 18279467 -53874415 + L1MEd LINE L1 2181 2346 -4050 405 340 67 8 chr20 18279509 18279747 -53874135 + L1MEd LINE L1 2554 2805 -3410 548 243 107 63 chr20 18279747 18279953 -53873929 + MER58C DNA MER1_type 1 215 0 667 259 15 41 chr20 18279994 18280191 -53873691 - L2 LINE L2 -6 3307 3116 1207 189 112 40 chr20 18280242 18280564 -53873318 - MER2 DNA MER2_type 0 345 1 24 53 0 0 chr20 18280564 18280602 -53873280 + AT_rich Low_complexity Low_complexity 1 38 0 304 262 90 83 chr20 18280671 18280745 -53873137 + L1MEd LINE L1 3077 3149 -3066 1719 179 7 17 chr20 18280745 18281042 -53872840 + AluJo SINE Alu 1 294 -18 304 262 90 83 chr20 18281042 18281257 -53872625 + L1MEd LINE L1 3149 3368 -2847 2058 145 0 0 chr20 18281305 18281595 -53872287 + AluSx SINE Alu 1 290 -22 320 271 107 55 chr20 18281607 18281917 -53871965 + L1MEd LINE L1 3439 3764 -2451 22 56 0 0 chr20 18281934 18281970 -53871912 + AT_rich Low_complexity Low_complexity 1 36 0 1199 203 78 17 chr20 18282041 18282336 -53871546 + L1MB7 LINE L1 5809 6121 -63 1487 206 52 14 chr20 18282341 18282686 -53871196 + MLT1A1 LTR MaLR 6 363 -2 283 293 71 25 chr20 18282706 18282904 -53870978 + L1MEd LINE L1 3944 4150 -2065 336 112 118 33 chr20 18282968 18283120 -53870762 + (TTTAA)n Simple_repeat Simple_repeat 1 165 0 22 35 0 0 chr20 18283125 18283154 -53870728 + AT_rich Low_complexity Low_complexity 1 29 0 241 291 82 15 chr20 18283171 18283305 -53870577 + L1MEd LINE L1 4273 4415 -1800 316 324 35 52 chr20 18284312 18284485 -53869397 + MIR3 SINE MIR 5 174 -34 387 0 0 0 chr20 18284573 18284616 -53869266 + (TG)n Simple_repeat Simple_repeat 2 44 0 2878 154 11 11 chr20 18284658 18284826 -53869056 + L1MB3 LINE L1 5657 5824 -359 789 196 0 0 chr20 18284826 18284959 -53868923 + FLAM_A SINE Alu 1 133 0 2878 154 11 11 chr20 18284959 18285316 -53868566 + L1MB3 LINE L1 5823 6182 -1 688 272 110 13 chr20 18286351 18286867 -53867015 - MLT2E LTR ERVL 0 628 7 401 295 6 38 chr20 18287347 18287579 -53866303 + CT-rich Low_complexity Low_complexity 1 224 0 202 56 56 0 chr20 18287738 18287774 -53866108 + CT-rich Low_complexity Low_complexity 1 38 0 590 300 46 36 chr20 18287786 18288089 -53865793 + L2 LINE L2 3008 3313 0 200 97 32 0 chr20 18288089 18288120 -53865762 + (TGAA)n Simple_repeat Simple_repeat 2 33 0 1148 196 128 4 chr20 18288530 18288679 -53865203 - AluJo SINE Alu -3 299 170 215 77 0 26 chr20 18288679 18288718 -53865164 + (TTTTG)n Simple_repeat Simple_repeat 5 42 0 1148 196 128 4 chr20 18288718 18288833 -53865049 - AluJo SINE Alu -132 170 2 21 0 0 0 chr20 18289126 18289147 -53864735 + AT_rich Low_complexity Low_complexity 1 21 0 231 133 0 0 chr20 18289164 18289209 -53864673 + (TG)n Simple_repeat Simple_repeat 2 46 0 22 56 0 0 chr20 18289249 18289285 -53864597 + AT_rich Low_complexity Low_complexity 1 36 0 21 57 0 0 chr20 18290270 18290305 -53863577 + AT_rich Low_complexity Low_complexity 1 35 0 4541 18 0 2 chr20 18290501 18291176 -53862706 - L1PA3 LINE L1 -373 5782 5109 3361 28 0 0 chr20 18291176 18291565 -53862317 + L1PA3 LINE L1 5763 6153 -2 7127 177 109 27 chr20 18291856 18293399 -53860483 + MER52A LTR ERV1 1 1755 0 396 247 41 94 chr20 18294166 18294433 -53859449 - MLT1K LTR MaLR -5 583 331 240 281 73 24 chr20 18294546 18294628 -53859254 - MIR SINE MIR -153 109 24 527 224 83 26 chr20 18295230 18295386 -53858496 + L1ME3 LINE L1 5969 6133 -29 1830 167 38 53 chr20 18295973 18296369 -53857513 - MLT1B LTR MaLR 0 390 1 281 266 13 0 chr20 18296662 18296741 -53857141 + L2 LINE L2 2897 2976 -337 666 116 0 0 chr20 18296821 18296916 -53856966 - AluS SINE Alu -217 95 1 745 208 94 0 chr20 18297168 18297327 -53856555 + MER8 DNA MER2_type 1 174 -65 392 133 13 40 chr20 18297363 18297438 -53856444 - Tigger2 DNA MER2_type -2645 73 1 1076 172 235 8 chr20 18299379 18299494 -53854388 + AluJo SINE Alu 2 90 -212 216 0 0 0 chr20 18299494 18299518 -53854364 + (TAAAA)n Simple_repeat Simple_repeat 4 27 0 1076 172 235 8 chr20 18299518 18299640 -53854242 + AluJo SINE Alu 90 293 -9 251 300 83 33 chr20 18300055 18300175 -53853707 - MER102a DNA MER1_type -1 329 204 535 295 76 19 chr20 18300512 18300874 -53853008 - MLT1J2 LTR MaLR 0 450 43 181 367 133 0 chr20 18300963 18301091 -53852791 - L2 LINE L2 -1 3271 3127 25 51 0 0 chr20 18301722 18301761 -53852121 + AT_rich Low_complexity Low_complexity 1 39 0 277 344 99 0 chr20 18302553 18302684 -53851198 + L2 LINE L2 3161 3304 -9 1235 265 41 29 chr20 18302745 18303236 -53850646 + Charlie4a DNA MER1_type 12 508 0 227 276 19 43 chr20 18303277 18303393 -53850489 + MIR SINE MIR 31 140 -68 181 171 73 0 chr20 18303364 18303405 -53850477 + L3 LINE CR1 1531 1574 -3 * 622 368 11 11 chr20 18305070 18305339 -53848543 + MLT1I LTR MaLR 1 269 -140 233 196 0 0 chr20 18305309 18305355 -53848527 + MLT1J1 LTR MaLR 275 320 -126 * 242 122 0 41 chr20 18305447 18305496 -53848386 + (TATG)n Simple_repeat Simple_repeat 3 49 0 704 261 190 48 chr20 18306634 18306678 -53847204 - LTR16C LTR ERVL -8 483 447 2044 231 89 8 chr20 18306678 18307194 -53846688 - MER74A LTR ERVL 0 558 1 704 261 190 48 chr20 18307194 18307486 -53846396 - LTR16C LTR ERVL -44 447 99 205 269 21 0 chr20 18308030 18308123 -53845759 + (TA)n Simple_repeat Simple_repeat 2 96 0 390 21 0 0 chr20 18308135 18308182 -53845700 + (TCTA)n Simple_repeat Simple_repeat 1 47 0 249 322 0 23 chr20 18308242 18308329 -53845553 + CT-rich Low_complexity Low_complexity 5 89 0 222 200 0 50 chr20 18309249 18309309 -53844573 + CT-rich Low_complexity Low_complexity 3 59 0 1381 177 23 34 chr20 18309516 18309782 -53844100 + AluJo SINE Alu 39 301 -11 2341 108 0 0 chr20 18310081 18310388 -53843494 + AluSx SINE Alu 1 307 -5 1263 218 100 50 chr20 18310559 18311058 -53842824 - L1MC4 LINE L1 -1 8041 7518 6123 102 12 12 chr20 18311089 18312383 -53841499 + L1PA11 LINE L1 4879 6172 -2 747 251 50 38 chr20 18312393 18312727 -53841155 - LTR37B LTR ERV1 -4 458 90 21 36 0 0 chr20 18313428 18313456 -53840426 + AT_rich Low_complexity Low_complexity 1 28 0 1571 175 0 0 chr20 18313809 18314072 -53839810 - AluJb SINE Alu 0 306 44 2154 125 3 0 chr20 18314079 18314374 -53839508 - AluSg SINE Alu -14 296 1 327 135 0 19 chr20 18314375 18314427 -53839455 - AluJb SINE Alu -252 51 1 440 302 103 30 chr20 18314530 18314957 -53838925 - L1ME4a LINE L1 -74 6047 5590 1616 175 56 7 chr20 18315203 18315489 -53838393 + AluJb SINE Alu 1 300 -12 499 296 51 23 chr20 18315523 18315699 -53838183 + MIR SINE MIR 82 262 0 458 195 213 6 chr20 18316875 18317020 -53836862 - MER5A DNA MER1_type -6 183 4 570 279 25 13 chr20 18317049 18317207 -53836675 - MER5A DNA MER1_type -21 168 9 213 192 0 50 chr20 18317340 18317403 -53836479 + MIR SINE MIR 106 145 -63 478 196 11 0 chr20 18317480 18317572 -53836310 - MER115 DNA AcHobo -8 685 593 1878 279 24 2 chr20 18317583 18318052 -53835830 - Zaphod DNA AcHobo -3434 597 119 484 277 122 64 chr20 18318866 18319162 -53834720 - MLT1J LTR MaLR -198 313 1 217 226 19 38 chr20 18321282 18321335 -53832547 - MIR SINE MIR -167 95 44 452 270 17 0 chr20 18321930 18322045 -53831837 - MLT1G1 LTR MaLR -478 117 1 807 192 106 134 chr20 18322522 18322842 -53831040 - L1ME2 LINE L1 -2 6162 5855 2891 16 0 0 chr20 18322842 18323160 -53830722 - AluYb8 SINE Alu 0 318 1 807 192 106 134 chr20 18323160 18323256 -53830626 - L1ME2 LINE L1 -309 5855 5758 * 5145 188 77 61 chr20 18323254 18323561 -53830321 - L1MDa LINE L1 -4449 2091 1791 2212 114 0 3 chr20 18323561 18323867 -53830015 - AluSg SINE Alu -5 305 1 5145 188 77 61 chr20 18323867 18325215 -53828667 - L1MDa LINE L1 -4749 1791 321 261 0 0 0 chr20 18325215 18325244 -53828638 + (TGG)n Simple_repeat Simple_repeat 3 31 0 * 333 0 0 0 chr20 18325243 18325280 -53828602 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 1175 212 78 12 chr20 18325280 18325535 -53828347 - L1MDa LINE L1 -6260 280 9 233 179 0 0 chr20 18325603 18325642 -53828240 + MIR SINE MIR 209 247 -15 201 154 0 0 chr20 18326662 18326701 -53827181 + T-rich Low_complexity Low_complexity 1 39 0 2048 143 138 5 chr20 18326721 18327099 -53826783 + MSTA LTR MaLR 1 428 0 2159 182 24 7 chr20 18327100 18327523 -53826359 - L1MB7 LINE L1 -51 6133 5704 2323 164 19 19 chr20 18327523 18327943 -53825939 + MSTB LTR MaLR 1 420 -6 1896 154 46 0 chr20 18327944 18328289 -53825593 - L1MB7 LINE L1 -471 5713 5353 21 0 0 0 chr20 18328461 18328482 -53825400 + AT_rich Low_complexity Low_complexity 1 21 0 724 200 5 93 chr20 18328927 18329132 -53824750 + MER5A DNA MER1_type 3 189 0 601 229 0 7 chr20 18330032 18330172 -53823710 - FLAM_C SINE Alu 0 143 5 696 136 0 0 chr20 18330554 18330685 -53823197 + FLAM_C SINE Alu 18 148 0 405 0 0 0 chr20 18331384 18331429 -53822453 + (TG)n Simple_repeat Simple_repeat 2 46 0 21 71 0 0 chr20 18331684 18331726 -53822156 + AT_rich Low_complexity Low_complexity 1 42 0 363 289 36 101 chr20 18331812 18332199 -53821683 + HAL1 LINE L1 963 1324 -1183 1744 86 8 0 chr20 18332223 18332480 -53821402 + L1MA2 LINE L1 6046 6304 0 22 0 0 0 chr20 18332656 18332678 -53821204 + AT_rich Low_complexity Low_complexity 1 22 0 229 284 11 11 chr20 18332958 18333046 -53820836 + L2 LINE L2 3085 3172 -141 353 269 161 20 chr20 18333433 18333582 -53820300 - MIR SINE MIR -23 239 70 2217 67 0 0 chr20 18334921 18335188 -53818694 + AluY SINE Alu 27 293 -18 24 0 0 85 chr20 18335530 18335577 -53818305 + AT_rich Low_complexity Low_complexity 1 43 0 241 277 24 24 chr20 18336626 18336709 -53817173 - L3 LINE CR1 -120 1457 1375 213 208 0 21 chr20 18336989 18337037 -53816845 + L2 LINE L2 3265 3311 -2 986 264 70 51 chr20 18339891 18340415 -53813467 + MLT1G LTR MaLR 10 553 -2 351 245 86 58 chr20 18340430 18340569 -53813313 - MARNA DNA Mariner -3 583 441 2126 120 0 47 chr20 18340791 18341108 -53812774 + AluSx SINE Alu 1 302 -10 23 33 0 0 chr20 18341260 18341290 -53812592 + AT_rich Low_complexity Low_complexity 1 30 0 1024 280 94 57 chr20 18341505 18342132 -53811750 - L1MC4a LINE L1 -497 5657 5523 384 298 75 25 chr20 18342243 18342404 -53811478 - MIR3 SINE MIR -23 185 17 268 287 42 56 chr20 18342905 18343048 -53810834 - MIR3 SINE MIR -30 178 38 245 98 24 0 chr20 18343481 18343522 -53810360 + (TCCC)n Simple_repeat Simple_repeat 3 44 0 338 227 27 18 chr20 18343820 18343930 -53809952 - MER103 DNA DNA -2 164 54 204 67 0 0 chr20 18343952 18343982 -53809900 + (T)n Simple_repeat Simple_repeat 1 30 0 2248 113 0 7 chr20 18344608 18344918 -53808964 - AluSc SINE Alu 0 309 2 228 200 0 0 chr20 18348180 18348230 -53805652 + CT-rich Low_complexity Low_complexity 3 52 0 253 270 40 14 chr20 18348546 18348620 -53805262 + MIR SINE MIR 64 139 -123 405 0 0 0 chr20 18350095 18350140 -53803742 + (TA)n Simple_repeat Simple_repeat 1 45 0 2635 27 0 3 chr20 18350142 18350443 -53803439 - AluY SINE Alu -11 300 1 317 248 179 0 chr20 18352596 18352713 -53801169 - MIR SINE MIR 0 262 125 1404 260 141 10 chr20 18353050 18353646 -53800236 + MER20B DNA MER1_type 1 674 -109 971 276 68 45 chr20 18353646 18354113 -53799769 - LTR16C LTR ERVL 0 491 14 411 261 9 0 chr20 18354120 18354231 -53799651 + MER20B DNA MER1_type 667 778 -5 198 0 0 0 chr20 18355297 18355319 -53798563 + (T)n Simple_repeat Simple_repeat 1 22 0 22 0 0 0 chr20 18355402 18355424 -53798458 + AT_rich Low_complexity Low_complexity 1 22 0 807 169 76 47 chr20 18356539 18356711 -53797171 + FRAM SINE Alu 1 176 0 1471 220 11 27 chr20 18356768 18357141 -53796741 + MLT1A2 LTR MaLR 4 370 -4 303 190 0 0 chr20 18357146 18357204 -53796678 + L1MC5 LINE L1 7856 7913 -48 251 283 11 22 chr20 18357241 18357333 -53796549 + MIR SINE MIR 137 227 -35 286 289 247 0 chr20 18357345 18357442 -53796440 - L2 LINE L2 -4 3309 3189 1154 236 10 38 chr20 18358098 18358411 -53795471 + L1MC4a LINE L1 7210 7513 -295 906 239 93 30 chr20 18358427 18358728 -53795154 - L1M4 LINE L1 -2275 3871 3552 1240 318 43 7 chr20 18358933 18359351 -53794531 - LTR16A LTR ERVL -2 448 16 204 40 0 0 chr20 18359630 18359655 -53794227 + (CA)n Simple_repeat Simple_repeat 2 26 0 1748 214 14 26 chr20 18359689 18359749 -53794133 - MER63 DNA MER1_type -11 1050 991 2447 60 0 32 chr20 18359749 18360063 -53793819 + AluY SINE Alu 1 304 -7 1748 214 14 26 chr20 18360063 18360417 -53793465 - MER63 DNA MER1_type -70 991 641 1892 159 50 0 chr20 18361668 18361988 -53791894 + MER47A DNA MER2_type 29 364 -2 252 100 0 0 chr20 18362374 18362414 -53791468 + (TG)n Simple_repeat Simple_repeat 1 40 0 2886 169 85 29 chr20 18362664 18363322 -53790560 + L1MB7 LINE L1 5471 6165 -19 185 270 9 113 chr20 18464236 18464351 -53689531 + MIR SINE MIR 89 191 -71 209 319 18 157 chr20 18464509 18464898 -53688984 - L2 LINE L2 -21 3251 2917 2155 151 49 36 chr20 18465172 18465617 -53688265 - L1MB7 LINE L1 -16 6168 5718 402 276 125 52 chr20 18466587 18467011 -53686871 - MLT1J LTR MaLR -52 459 5 294 125 0 0 chr20 18467034 18467082 -53686800 + (TCC)n Simple_repeat Simple_repeat 2 49 0 2189 104 0 4 chr20 18467229 18467550 -53686332 + AluSq SINE Alu 6 325 0 25 0 0 0 chr20 18468055 18468080 -53685802 + AT_rich Low_complexity Low_complexity 1 25 0 663 279 113 0 chr20 18468780 18469009 -53684873 - MIR SINE MIR -2 260 6 2560 40 0 3 chr20 18469154 18469452 -53684430 + AluY SINE Alu 1 297 -14 180 269 125 39 chr20 18470074 18470178 -53683704 - L2 LINE L2 -160 3112 3000 767 214 21 7 chr20 18471509 18471654 -53682228 + FRAM SINE Alu 1 146 -30 255 61 0 0 chr20 18471657 18471690 -53682192 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 261 327 49 37 chr20 18471718 18471880 -53682002 + MLT1J LTR MaLR 254 417 -94 344 330 52 0 chr20 18472095 18472210 -53681672 + MIR SINE MIR 34 154 -108 1887 139 13 25 chr20 18472895 18473211 -53680671 + AluJb SINE Alu 1 312 0 232 349 35 0 chr20 18473909 18473995 -53679887 + MIR3 SINE MIR 110 198 -10 591 294 43 19 chr20 18474060 18474271 -53679611 + MIR SINE MIR 43 258 -4 224 154 77 77 chr20 18474670 18474735 -53679147 - L3 LINE CR1 -1101 476 412 1023 162 5 46 chr20 18474840 18475037 -53678845 + MER58A DNA MER1_type 36 224 0 29 94 0 0 chr20 18475039 18475124 -53678758 + AT_rich Low_complexity Low_complexity 1 85 0 265 350 25 19 chr20 18477028 18477185 -53676697 - L2 LINE L2 -823 2491 2334 461 316 30 6 chr20 18477665 18477833 -53676049 + GA-rich Low_complexity Low_complexity 2 173 0 21 0 0 0 chr20 18478063 18478084 -53675798 + AT_rich Low_complexity Low_complexity 1 21 0 642 277 69 50 chr20 18479946 18480249 -53673633 - L2 LINE L2 -9 3304 2996 822 257 115 7 chr20 18480752 18481048 -53672834 + MER46C DNA MER2_type 10 337 -1 243 213 0 49 chr20 18481095 18481156 -53672726 + CT-rich Low_complexity Low_complexity 1 58 0 447 90 75 0 chr20 18481246 18481313 -53672569 - MER53 DNA DNA -117 72 1 333 295 129 42 chr20 18481349 18481800 -53672082 + L2 LINE L2 1803 2292 -1022 707 211 39 6 chr20 18481860 18482040 -53671842 + MER53 DNA DNA 1 186 -3 180 111 0 0 chr20 18482224 18482251 -53671631 + (TCCC)n Simple_repeat Simple_repeat 2 28 0 1575 144 11 49 chr20 18482468 18482752 -53671130 + AluJo SINE Alu 28 300 -12 474 299 26 20 chr20 18482913 18483168 -53670714 + GA-rich Low_complexity Low_complexity 1 256 0 415 295 9 0 chr20 18484042 18484147 -53669735 + MIR3 SINE MIR 87 192 -16 28 29 0 0 chr20 18485733 18485768 -53668114 + AT_rich Low_complexity Low_complexity 1 35 0 265 291 0 0 chr20 18485832 18485887 -53667995 + L2 LINE L2 3207 3261 -11 1294 139 0 29 chr20 18486012 18486220 -53667662 + AluSg/x SINE Alu 84 285 -25 217 250 0 19 chr20 18487965 18488017 -53665865 - L2 LINE L2 -1 3271 3221 1508 134 142 19 chr20 18488804 18489072 -53664810 - AluJb SINE Alu -1 301 1 2907 219 68 12 chr20 18489237 18490035 -53663847 + MER63C DNA MER1_type 1 842 -88 499 289 71 40 chr20 18490246 18490471 -53663411 - L2 LINE L2 -140 3173 2942 972 318 46 44 chr20 18490537 18491104 -53662778 - L2 LINE L2 -465 2849 2282 348 209 0 0 chr20 18491104 18491171 -53662711 - MER116 DNA Mariner 0 80 14 198 167 0 0 chr20 18492170 18492206 -53661676 + CT-rich Low_complexity Low_complexity 3 38 0 2200 70 3 0 chr20 18492337 18492624 -53661258 - L1PA7 LINE L1 -1 6153 5866 211 229 0 21 chr20 18493109 18493157 -53660725 + T-rich Low_complexity Low_complexity 3 49 0 2452 85 0 0 chr20 18493300 18493606 -53660276 + AluY SINE Alu 1 306 -5 477 346 78 6 chr20 18493634 18493821 -53660061 + MIR3 SINE MIR 4 206 -2 348 303 5 128 chr20 18494589 18494800 -53659082 + MIR SINE MIR 60 244 -18 216 235 0 0 chr20 18496155 18496223 -53657659 + (TA)n Simple_repeat Simple_repeat 1 68 0 279 239 23 11 chr20 18496250 18496338 -53657544 + (TA)n Simple_repeat Simple_repeat 1 89 0 269 241 138 0 chr20 18496392 18496479 -53657403 + L1ME LINE L1 1253 1351 -5045 220 222 16 16 chr20 18496486 18496549 -53657333 + (CAAA)n Simple_repeat Simple_repeat 2 64 0 333 287 73 54 chr20 18496658 18496787 -53657095 + L1ME LINE L1 4578 4703 -1512 1680 199 7 0 chr20 18496787 18497093 -53656789 + AluJo SINE Alu 1 308 -4 333 287 73 54 chr20 18497093 18497280 -53656602 + L1ME LINE L1 4703 4900 -1315 1471 204 17 27 chr20 18497426 18497720 -53656162 - AluJo SINE Alu -21 291 1 21 36 0 0 chr20 18497787 18497815 -53656067 + AT_rich Low_complexity Low_complexity 1 28 0 563 291 74 34 chr20 18497887 18498265 -53655617 + L1ME LINE L1 5327 5719 -512 21 0 0 0 chr20 18499598 18499619 -53654263 + AT_rich Low_complexity Low_complexity 1 21 0 2219 106 0 3 chr20 18501727 18502028 -53651854 + AluSx SINE Alu 1 300 -12 695 199 25 19 chr20 18502186 18502347 -53651535 - MER5A DNA MER1_type -27 162 1 23 54 0 0 chr20 18502572 18502609 -53651273 + AT_rich Low_complexity Low_complexity 1 37 0 2358 88 0 0 chr20 18503164 18503459 -53650423 + AluSg SINE Alu 1 295 -15 1510 161 33 50 chr20 18503638 18503937 -53649945 + AluJo SINE Alu 1 294 -18 22 0 0 0 chr20 18504372 18504394 -53649488 + AT_rich Low_complexity Low_complexity 1 22 0 2159 100 14 3 chr20 18504815 18505106 -53648776 - AluSg SINE Alu -16 294 1 22 0 0 0 chr20 18506453 18506475 -53647407 + AT_rich Low_complexity Low_complexity 1 22 0 435 119 0 0 chr20 18507454 18507521 -53646361 + (TTCC)n Simple_repeat Simple_repeat 3 69 0 315 169 46 15 chr20 18507521 18507586 -53646296 + CT-rich Low_complexity Low_complexity 2 68 0 25 0 0 0 chr20 18507616 18507641 -53646241 + AT_rich Low_complexity Low_complexity 1 25 0 4307 238 61 22 chr20 18507896 18508196 -53645686 + L1MD2 LINE L1 3843 4130 -2112 2169 99 61 0 chr20 18508196 18508489 -53645393 + AluSx SINE Alu 1 311 -1 4307 238 61 22 chr20 18508489 18509896 -53643986 + L1MD2 LINE L1 4130 5629 -613 2267 228 114 11 chr20 18510072 18510765 -53643117 + L1MD2 LINE L1 5604 6359 0 38 39 0 0 chr20 18510924 18510976 -53642906 + AT_rich Low_complexity Low_complexity 1 52 0 220 149 64 0 chr20 18511314 18511361 -53642521 + (TTAAA)n Simple_repeat Simple_repeat 3 52 0 1670 175 79 23 chr20 18511514 18511868 -53642014 + MLT1A2 LTR MaLR 1 374 0 2535 58 0 6 chr20 18512382 18512694 -53641188 + AluY SINE Alu 1 310 -1 1908 159 7 3 chr20 18513700 18513989 -53639893 - AluSx SINE Alu -22 290 1 808 262 31 26 chr20 18514137 18514366 -53639516 - MIR SINE MIR -10 252 23 1828 252 75 68 chr20 18514667 18515397 -53638485 + MER21B LTR ERV1 1 735 -128 427 263 73 7 chr20 18515432 18515569 -53638313 + MIR SINE MIR 77 222 -40 399 300 82 45 chr20 18515612 18515987 -53637895 - L1ME4a LINE L1 -206 5915 5516 9190 25 4 0 chr20 18515987 18517839 -53636043 - L1PA4 LINE L1 -11 6144 4289 399 300 82 45 chr20 18517839 18517950 -53635932 - L1ME4a LINE L1 -605 5516 5411 782 287 50 4 chr20 18518800 18519058 -53634824 - MER77 LTR ERV1 -7 598 329 325 335 68 11 chr20 18519060 18519236 -53634646 - MIR SINE MIR -69 193 8 198 0 0 0 chr20 18519534 18519556 -53634326 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 2153 112 0 3 chr20 18520720 18521015 -53632867 - AluSg SINE Alu -16 294 1 2654 93 0 29 chr20 18521602 18521977 -53631905 + THE1B LTR MaLR 1 364 0 673 285 45 77 chr20 18522073 18522515 -53631367 - MLT1J2 LTR MaLR -22 428 1 356 272 134 69 chr20 18522631 18522788 -53631094 - L2 LINE L2 0 3313 3133 276 100 0 0 chr20 18522788 18522828 -53631054 + (TTATA)n Simple_repeat Simple_repeat 1 40 0 356 272 134 69 chr20 18522828 18522916 -53630966 - L2 LINE L2 -180 3133 3052 554 209 0 35 chr20 18524250 18524365 -53629517 + FRAM SINE Alu 12 122 -54 23 0 0 0 chr20 18524365 18524388 -53629494 + AT_rich Low_complexity Low_complexity 1 23 0 950 200 24 29 chr20 18524732 18524942 -53628940 - MER3 DNA MER1_type 0 209 1 327 283 10 10 chr20 18525121 18525220 -53628662 + L2 LINE L2 3214 3312 -1 1460 208 40 30 chr20 18525246 18525616 -53628266 + MLT1A2 LTR MaLR 1 374 0 223 280 150 30 chr20 18526830 18526930 -53626952 + MIR SINE MIR 25 136 -72 1624 201 0 10 chr20 18528427 18528715 -53625167 - AluJo SINE Alu -21 291 7 34 42 0 0 chr20 18529119 18529167 -53624715 + AT_rich Low_complexity Low_complexity 1 48 0 696 101 0 0 chr20 18529538 18529627 -53624255 + FLAM SINE Alu 38 126 -17 203 289 13 0 chr20 18530028 18530054 -53623828 + GA-rich Low_complexity Low_complexity 2 26 -52 2427 91 0 0 chr20 18530054 18530363 -53623519 + AluSg1 SINE Alu 1 309 0 203 289 13 0 chr20 18530363 18530412 -53623470 + GA-rich Low_complexity Low_complexity 26 78 0 200 143 24 0 chr20 18531292 18531334 -53622548 + (TCTA)n Simple_repeat Simple_repeat 4 46 0 778 252 49 24 chr20 18531702 18531948 -53621934 + MIR SINE MIR 7 258 -4 1395 222 36 17 chr20 18532423 18532784 -53621098 + MER95 LTR ERV 5 372 -59 1078 142 41 23 chr20 18532787 18533006 -53620876 + L1MA8 LINE L1 6063 6285 -6 272 121 182 15 chr20 18533238 18533304 -53620578 + MER95 LTR ERV 353 429 -2 222 91 0 0 chr20 18534714 18534747 -53619135 + (TG)n Simple_repeat Simple_repeat 2 34 0 294 289 105 0 chr20 18535979 18536093 -53617789 - MIR SINE MIR -131 131 6 552 276 29 11 chr20 18536758 18536932 -53616950 - MIR SINE MIR -61 201 25 761 257 22 6 chr20 18537193 18537376 -53616506 - MER5A DNA MER1_type -3 186 1 181 169 34 34 chr20 18538659 18538718 -53615164 + (TATG)n Simple_repeat Simple_repeat 2 60 0 21 71 0 0 chr20 18538933 18538975 -53614907 + AT_rich Low_complexity Low_complexity 1 42 0 255 169 0 34 chr20 18540152 18540211 -53613671 - MER5A DNA MER1_type 0 189 133 960 212 129 62 chr20 18540213 18540665 -53613217 - MER39 LTR ERV1 0 707 5 322 194 0 45 chr20 18540677 18540744 -53613138 - MER5A DNA MER1_type -73 116 53 735 167 0 38 chr20 18540902 18541034 -53612848 - FLAM_C SINE Alu -16 127 1 488 245 97 97 chr20 18541407 18541746 -53612136 - L1ME4a LINE L1 -212 5909 5571 767 273 92 51 chr20 18542009 18542635 -53611247 + L2 LINE L2 2659 3308 -5 996 269 58 52 chr20 18542704 18542778 -53611104 + MER39 LTR ERV1 1 73 -634 2532 98 45 3 chr20 18542778 18543136 -53610746 + THE1C LTR MaLR 1 373 -2 996 269 58 52 chr20 18543136 18543553 -53610329 + MER39 LTR ERV1 73 707 0 23 0 0 0 chr20 18544031 18544054 -53609828 + AT_rich Low_complexity Low_complexity 1 23 0 203 321 113 28 chr20 18547454 18547560 -53606322 - MIR SINE MIR -61 147 33 2248 109 0 3 chr20 18548400 18548703 -53605179 + AluSc SINE Alu 1 302 -7 551 279 79 16 chr20 18549534 18549724 -53604158 + MLT1J2 LTR MaLR 24 225 -225 2891 176 69 38 chr20 18550067 18550263 -53603619 - L1MB5 LINE L1 -7 6665 6477 2029 100 21 0 chr20 18550263 18550542 -53603340 - AluSx SINE Alu -5 307 23 2891 176 69 38 chr20 18550542 18551038 -53602844 - L1MB5 LINE L1 -195 6477 5951 6686 216 38 84 chr20 18551046 18552528 -53601354 - L1MB5 LINE L1 -1518 5126 3577 1021 247 167 46 chr20 18552528 18552952 -53600930 + MLT2B1 LTR ERVL 3 489 -31 539 73 0 12 chr20 18552952 18553034 -53600848 + (TAGA)n Simple_repeat Simple_repeat 2 82 0 1021 247 167 46 chr20 18553034 18553070 -53600812 + MLT2B1 LTR ERVL 489 519 -1 6686 216 38 84 chr20 18553070 18555465 -53598417 - L1MB5 LINE L1 -3067 3577 1349 844 289 57 41 chr20 18555473 18555892 -53597990 - L1MB5 LINE L1 -5758 784 359 769 204 0 0 chr20 18556047 18556179 -53597703 - AluJo SINE Alu -177 135 4 434 312 19 0 chr20 18556212 18556366 -53597516 - L1MB5 LINE L1 -6384 158 2 23 54 0 0 chr20 18556606 18556643 -53597239 + AT_rich Low_complexity Low_complexity 1 37 0 2528 59 0 3 chr20 18556962 18557266 -53596616 - AluY SINE Alu -8 303 1 273 298 11 0 chr20 18557445 18557539 -53596343 + (CATA)n Simple_repeat Simple_repeat 1 95 0 219 186 0 0 chr20 18557628 18557671 -53596211 + (CATATA)n Simple_repeat Simple_repeat 6 48 0 317 288 25 75 chr20 18557769 18557929 -53595953 - L1MC4a LINE L1 -1777 6031 5880 619 171 93 102 chr20 18557943 18558276 -53595606 - L1MC5 LINE L1 -46 7915 7586 235 194 16 32 chr20 18558258 18558320 -53595562 - L1MC4a LINE L1 -2119 5689 5629 * 3514 139 7 0 chr20 18558540 18559094 -53594788 - L1PA16 LINE L1 -3 6163 5606 196 68 23 45 chr20 18559182 18559226 -53594656 + (TTTTTG)n Simple_repeat Simple_repeat 1 43 0 26 0 0 0 chr20 18560265 18560291 -53593591 + AT_rich Low_complexity Low_complexity 1 26 0 473 325 53 22 chr20 18560292 18560520 -53593362 - MIR SINE MIR -26 236 2 430 349 165 34 chr20 18560546 18560898 -53592984 + L2 LINE L2 2870 3267 -5 2602 203 25 102 chr20 18562197 18563142 -53590740 + L1MC4 LINE L1 7170 8042 0 1203 169 106 33 chr20 18563322 18563686 -53590196 + MSTB LTR MaLR 1 424 -2 568 267 140 36 chr20 18563925 18564146 -53589736 + MIR SINE MIR 17 260 -2 423 300 0 40 chr20 18564393 18564616 -53589266 + L1MC4a LINE L1 5726 5939 -1869 215 222 48 0 chr20 18565310 18565373 -53588509 - MIR SINE MIR -71 137 72 621 301 55 34 chr20 18565377 18565504 -53588378 - MER102b DNA MER1_type -1091 337 214 2558 173 24 18 chr20 18565504 18566014 -53587868 - LTR10D LTR ERV1 0 513 1 621 301 55 34 chr20 18566014 18566212 -53587670 - MER102b DNA MER1_type -1214 214 5 22 0 0 0 chr20 18566318 18566340 -53587542 + AT_rich Low_complexity Low_complexity 1 22 0 185 346 156 17 chr20 18566626 18566973 -53586909 - L2 LINE L2 -357 2957 2563 287 298 265 7 chr20 18567432 18567583 -53586299 - MIR SINE MIR 0 262 73 247 246 0 7 chr20 18567583 18567662 -53586220 + L1MC4a LINE L1 5347 5423 -741 617 243 183 70 chr20 18567695 18568096 -53585786 + L1MC4a LINE L1 5504 5955 -1853 255 61 0 0 chr20 18568096 18568129 -53585753 + (TG)n Simple_repeat Simple_repeat 2 34 0 617 243 183 70 chr20 18568129 18568143 -53585739 + L1MC4a LINE L1 5955 5966 -1842 673 180 23 8 chr20 18568762 18568890 -53584992 + FLAM_C SINE Alu 4 133 0 518 218 241 0 chr20 18569889 18570022 -53583860 - MER5A DNA MER1_type -15 174 10 667 222 48 0 chr20 18570037 18570204 -53583678 + MER5B DNA MER1_type 1 175 -3 342 288 144 45 chr20 18570251 18570473 -53583409 + L3 LINE CR1 903 1146 -431 677 314 57 13 chr20 18571496 18571725 -53582157 + MIR SINE MIR 21 259 -3 401 305 70 32 chr20 18572217 18572404 -53581478 - MIR SINE MIR -53 209 16 21 0 0 0 chr20 18572589 18572610 -53581272 + AT_rich Low_complexity Low_complexity 1 21 0 674 206 161 62 chr20 18574134 18574323 -53579559 - L1MC5 LINE L1 -435 7526 7357 2847 124 28 2 chr20 18574323 18574760 -53579122 - MER83 LTR ERV1 0 448 1 674 206 161 62 chr20 18574760 18574852 -53579030 - L1MC5 LINE L1 -604 7357 7276 345 47 0 0 chr20 18574852 18574895 -53578987 + (TG)n Simple_repeat Simple_repeat 1 43 0 674 206 161 62 chr20 18574895 18575015 -53578867 - L1MC5 LINE L1 -685 7276 7084 2467 122 8 3 chr20 18575165 18575527 -53578355 - THE1B LTR MaLR 0 364 1 229 205 61 0 chr20 18575560 18575626 -53578256 - L1MC/D LINE L1 -727 5439 5384 442 242 60 71 chr20 18576266 18576349 -53577533 - Charlie8 DNA MER1_type -147 194 112 2309 92 0 10 chr20 18576349 18576655 -53577227 - AluSq SINE Alu -10 303 1 442 242 60 71 chr20 18576655 18576753 -53577129 - Charlie8 DNA MER1_type -229 112 15 551 325 123 20 chr20 18577279 18577571 -53576311 + L3 LINE CR1 1239 1560 -17 193 282 87 48 chr20 18577807 18577910 -53575972 - MIR SINE MIR -86 122 16 515 87 0 0 chr20 18577956 18578025 -53575857 + THE1C LTR MaLR 3 71 -304 799 158 0 8 chr20 18578316 18578449 -53575433 + FLAM_A SINE Alu 1 132 -1 25 51 0 0 chr20 18578864 18578903 -53574979 + AT_rich Low_complexity Low_complexity 1 39 0 204 214 0 0 chr20 18579634 18579676 -53574206 + (TGGA)n Simple_repeat Simple_repeat 4 45 0 22 56 0 0 chr20 18580296 18580332 -53573550 + AT_rich Low_complexity Low_complexity 1 36 0 218 308 22 22 chr20 18580381 18580472 -53573410 - MIR SINE MIR -62 200 110 301 250 0 0 chr20 18580644 18580700 -53573182 + L2 LINE L2 3215 3270 -2 212 391 69 25 chr20 18580731 18580933 -53572949 + L2 LINE L2 2658 2868 -446 2555 196 20 14 chr20 18581539 18581580 -53572302 - MLT2B2 LTR ERVL -8 507 468 504 93 0 0 chr20 18581580 18581655 -53572227 + (TAGA)n Simple_repeat Simple_repeat 2 76 0 2555 196 20 14 chr20 18581655 18582112 -53571770 - MLT2B2 LTR ERVL -47 468 6 570 276 81 42 chr20 18582120 18582403 -53571479 + MLT1K LTR MaLR 295 588 0 505 264 66 74 chr20 18583823 18584081 -53569801 + L2 LINE L2 3043 3298 -15 944 226 31 86 chr20 18584960 18585450 -53568432 - LTR37B LTR ERV1 -5 463 1 248 222 123 25 chr20 18585647 18585728 -53568154 - MIR SINE MIR -108 154 66 342 290 0 69 chr20 18586041 18586172 -53567710 + L1MC5 LINE L1 7298 7419 -542 552 217 104 51 chr20 18586341 18586677 -53567205 + L1MC5 LINE L1 7560 7913 -48 2337 109 3 0 chr20 18586768 18587104 -53566778 - AluSq SINE Alu 0 313 1 1990 140 32 24 chr20 18587273 18587645 -53566237 + THE1C LTR MaLR 1 375 0 10522 103 21 35 chr20 18587645 18589247 -53564635 + THE1C-int LTR MaLR 1 1580 0 1950 153 26 34 chr20 18589247 18589625 -53564257 + THE1C LTR MaLR 1 375 0 551 155 0 0 chr20 18589627 18589711 -53564171 + 5S rRNA rRNA 7 90 -31 28 29 0 0 chr20 18590146 18590181 -53563701 + AT_rich Low_complexity Low_complexity 1 35 0 253 263 147 11 chr20 18590469 18590564 -53563318 - L2 LINE L2 -1 3312 3205 296 292 0 0 chr20 18590664 18590736 -53563146 + MIR SINE MIR 181 252 -10 186 293 20 61 chr20 18591956 18592055 -53561827 - MIR SINE MIR -132 130 36 204 220 0 60 chr20 18592664 18592714 -53561168 + polypyrimidine Low_complexity Low_complexity 3 49 0 222 234 0 0 chr20 18592717 18592764 -53561118 - MIR SINE MIR -139 123 77 679 172 185 0 chr20 18592844 18592995 -53560887 + MER5A DNA MER1_type 11 189 0 419 259 75 26 chr20 18593191 18593522 -53560360 + MLT1L LTR MaLR 224 614 -1 2540 63 0 0 chr20 18594072 18594375 -53559507 - AluY SINE Alu -8 303 1 243 306 118 69 chr20 18595057 18595201 -53558681 + L2 LINE L2 2683 2833 -481 199 279 0 0 chr20 18595196 18595239 -53558643 + MER5B DNA MER1_type 7 49 -129 * 214 49 24 24 chr20 18595239 18595280 -53558602 + (TTTG)n Simple_repeat Simple_repeat 4 44 0 209 214 54 107 chr20 18595294 18595406 -53558476 - MER5B DNA MER1_type -45 133 28 447 310 81 101 chr20 18595414 18595859 -53558023 + L2 LINE L2 2836 3271 -1 449 329 83 9 chr20 18596496 18596724 -53557158 - MIR SINE MIR 0 262 18 2904 87 27 40 chr20 18597006 18597456 -53556426 - MLT2A1 LTR ERVL 0 444 1 355 164 16 0 chr20 18598401 18598462 -53555420 - AluS SINE Alu -241 62 1 25 0 0 0 chr20 18598468 18598493 -53555389 + AT_rich Low_complexity Low_complexity 1 25 0 372 314 103 13 chr20 18599426 18599582 -53554300 - MLT1H LTR MaLR -357 192 23 860 364 99 28 chr20 18599603 18600402 -53553480 + L2 LINE L2 1944 2799 -515 296 401 8 8 chr20 18600982 18601114 -53552768 + L2 LINE L2 3134 3265 -7 505 311 156 34 chr20 18603733 18604260 -53549622 + L2 LINE L2 2727 3309 -4 1881 134 89 17 chr20 18604451 18604801 -53549081 + THE1C LTR MaLR 1 375 0 218 343 66 55 chr20 18608393 18608682 -53545200 + L2 LINE L2 1678 1969 -1345 1857 172 0 0 chr20 18610351 18610664 -53543218 + AluSx SINE Alu 1 313 0 225 280 0 0 chr20 18610838 18610913 -53542969 + L1MD3 LINE L1 7911 7985 -10 687 328 122 45 chr20 18611082 18611591 -53542291 - L2 LINE L2 -552 2762 2215 441 289 143 22 chr20 18611744 18612156 -53541726 + LTR33 LTR ERVL 44 505 -16 187 278 0 125 chr20 18613306 18613378 -53540504 - MIR3 SINE MIR -8 200 138 821 160 0 0 chr20 18614750 18614869 -53539013 + FLAM_C SINE Alu 1 119 -24 286 297 50 0 chr20 18615219 18615320 -53538562 + MIR SINE MIR 49 154 -108 5406 59 3 0 chr20 18615357 18616040 -53537842 - L1PA7 LINE L1 -13 6141 5457 665 189 0 39 chr20 18616195 18616322 -53537560 - FLAM_C SINE Alu -21 122 1 1139 161 0 5 chr20 18616322 18616508 -53537374 - AluSg/x SINE Alu -14 298 114 271 259 63 60 chr20 18617572 18617970 -53535912 + L1ME4a LINE L1 5705 6103 -18 756 256 37 67 chr20 18618325 18618595 -53535287 - MIR SINE MIR 0 262 1 1561 209 154 19 chr20 18618618 18619044 -53534838 + MLT2B1 LTR ERVL 1 547 -7 243 0 0 0 chr20 18619348 18619375 -53534507 + (CA)n Simple_repeat Simple_repeat 2 28 0 276 30 0 0 chr20 18619441 18619474 -53534408 + (CA)n Simple_repeat Simple_repeat 2 34 0 288 154 0 0 chr20 18619483 18619535 -53534347 + (TATATG)n Simple_repeat Simple_repeat 3 54 0 201 267 12 23 chr20 18619886 18619972 -53533910 + CT-rich Low_complexity Low_complexity 4 88 0 2175 133 19 27 chr20 18620018 18620385 -53533497 - THE1B LTR MaLR 0 364 1 336 256 185 38 chr20 18620554 18620765 -53533117 - MLT1J LTR MaLR -30 481 240 275 262 12 0 chr20 18620962 18621046 -53532836 - MLT1J LTR MaLR 0 567 483 1183 142 40 32 chr20 18621053 18621300 -53532582 - L1MA9 LINE L1 -282 6030 5782 459 120 27 0 chr20 18621459 18621534 -53532348 - MLT1B LTR MaLR 0 390 314 2283 179 24 7 chr20 18622965 18623384 -53530498 - MSTB LTR MaLR 0 426 1 286 288 42 34 chr20 18624043 18624161 -53529721 + MIR SINE MIR 118 236 -26 1404 244 142 19 chr20 18624395 18624964 -53528918 - L1ME3A LINE L1 -1 6169 5531 240 268 24 37 chr20 18625792 18625874 -53528008 - MIR SINE MIR -147 115 35 238 333 137 24 chr20 18626510 18626678 -53527204 - MIR3 SINE MIR -6 202 16 548 276 54 63 chr20 18627621 18627784 -53526098 - MIR SINE MIR -26 236 74 608 244 8 0 chr20 18627784 18627915 -53525967 + FLAM_A SINE Alu 2 133 0 548 276 54 63 chr20 18627915 18627972 -53525910 - MIR SINE MIR -188 74 18 2306 87 3 0 chr20 18627984 18628283 -53525599 + AluSp SINE Alu 1 300 -13 1656 169 46 9 chr20 18628614 18628964 -53524918 - L1MA6 LINE L1 0 6300 5938 2308 116 7 0 chr20 18629617 18629927 -53523955 - AluSx SINE Alu 0 312 1 879 244 23 30 chr20 18630270 18630536 -53523346 + LTR16A LTR ERVL 167 430 -20 1241 293 51 33 chr20 18631321 18631775 -53522107 - LTR16C LTR ERVL -1 490 29 282 321 117 88 chr20 18631918 18632329 -53521553 + L2 LINE L2 2850 3272 0 276 111 0 0 chr20 18632868 18632913 -53520969 + (CA)n Simple_repeat Simple_repeat 2 46 0 443 216 48 106 chr20 18633432 18633640 -53520242 - MLT1J LTR MaLR -101 410 215 333 47 0 0 chr20 18633898 18633941 -53519941 + (GA)n Simple_repeat Simple_repeat 2 44 0 1748 161 24 10 chr20 18636006 18636304 -53517578 + AluJb SINE Alu 1 302 -10 2376 98 0 0 chr20 18636467 18636772 -53517110 - AluSx SINE Alu -7 305 1 2370 109 0 0 chr20 18637166 18637479 -53516403 - AluSq SINE Alu 0 313 1 231 323 121 40 chr20 18639172 18639296 -53514586 + MIR3 SINE MIR 39 172 -36 29 0 0 0 chr20 18639535 18639564 -53514318 + AT_rich Low_complexity Low_complexity 1 29 0 286 306 37 28 chr20 18640681 18640770 -53513112 - L2 LINE L2 -2 3270 3181 215 367 85 15 chr20 18640770 18640969 -53512913 + MIR SINE MIR 1 213 -49 301 295 54 0 chr20 18641199 18641328 -53512554 - LTR33A LTR ERVL 0 523 388 322 212 230 0 chr20 18641624 18641789 -53512093 - LTR50 LTR ERVL -592 203 1 1225 319 119 35 chr20 18642413 18643728 -53510154 - L2 LINE L2 -1 3312 1875 1031 308 97 58 chr20 18644569 18645566 -53508316 + L2 LINE L2 2252 3302 -11 213 39 0 0 chr20 18645567 18645593 -53508289 + (TGAA)n Simple_repeat Simple_repeat 1 26 0 246 266 13 25 chr20 18649413 18649492 -53504390 + MIR3 SINE MIR 128 205 -3 26 50 0 0 chr20 18650283 18650323 -53503559 + AT_rich Low_complexity Low_complexity 1 40 0 354 45 0 0 chr20 18650464 18650508 -53503374 + (CA)n Simple_repeat Simple_repeat 1 44 0 2237 125 0 0 chr20 18651179 18651484 -53502398 - AluSx SINE Alu -7 305 1 23 0 0 0 chr20 18651895 18651918 -53501964 + AT_rich Low_complexity Low_complexity 1 23 0 246 81 0 0 chr20 18652560 18652597 -53501285 + (TG)n Simple_repeat Simple_repeat 1 37 0 * 255 31 0 0 chr20 18652596 18652628 -53501254 + (GA)n Simple_repeat Simple_repeat 1 32 0 479 289 18 0 chr20 18653271 18653385 -53500497 - MIR SINE MIR -141 121 6 552 271 181 0 chr20 18653599 18653776 -53500106 + MIR SINE MIR 54 262 0 29753 108 14 56 chr20 18653866 18660283 -53493599 + L1PA7 LINE L1 13 6151 -3 1804 201 53 0 chr20 18660376 18660755 -53493127 - MER21B LTR ERV1 -1 862 464 23 33 0 0 chr20 18660850 18660880 -53493002 + AT_rich Low_complexity Low_complexity 1 30 0 2793 78 5 32 chr20 18660882 18661294 -53492588 - L1PA10 LINE L1 0 6168 5768 2290 189 4 62 chr20 18661295 18661792 -53492090 - MER21B LTR ERV1 -391 472 5 278 310 75 27 chr20 18662353 18662540 -53491342 - L2 LINE L2 -2 3311 3116 321 26 0 0 chr20 18662625 18662663 -53491219 + (TGAA)n Simple_repeat Simple_repeat 1 38 0 26 30 0 0 chr20 18663467 18663500 -53490382 + AT_rich Low_complexity Low_complexity 1 33 0 484 259 91 81 chr20 18665423 18665720 -53488162 - LTR16C LTR ERVL -191 300 1 234 0 0 0 chr20 18666529 18666555 -53487327 + (T)n Simple_repeat Simple_repeat 1 26 0 262 213 27 40 chr20 18666610 18666685 -53487197 - MIR SINE MIR -110 152 79 2185 128 3 6 chr20 18666686 18666999 -53486883 + AluSx SINE Alu 1 312 0 488 306 141 51 chr20 18667130 18667578 -53486304 - L2 LINE L2 0 3313 2826 301 259 17 43 chr20 18668010 18668126 -53485756 + L1ME4a LINE L1 5997 6109 -12 696 203 7 46 chr20 18669097 18669250 -53484632 - MER5B DNA MER1_type -26 152 6 895 294 56 33 chr20 18671029 18671420 -53482462 - MLT1J LTR MaLR 0 511 112 237 33 0 0 chr20 18671476 18671506 -53482376 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 797 275 153 12 chr20 18672046 18672366 -53481516 - MLT1G1 LTR MaLR -7 588 224 194 170 0 64 chr20 18672547 18672594 -53481288 - L2 LINE L2 -12 3301 3258 182 329 0 14 chr20 18672624 18672697 -53481185 - MIR SINE MIR -110 152 81 21 57 0 0 chr20 18675687 18675722 -53478160 + AT_rich Low_complexity Low_complexity 1 35 0 499 301 59 70 chr20 18676162 18676418 -53477464 - L2 LINE L2 0 3272 3020 780 134 28 7 chr20 18676682 18676824 -53477058 - L1PA10 LINE L1 -54 6114 5970 2209 70 0 4 chr20 18676832 18677105 -53476777 - AluY SINE Alu -11 300 29 24 0 0 0 chr20 18678616 18678640 -53475242 + AT_rich Low_complexity Low_complexity 1 24 0 271 346 0 0 chr20 18678840 18678918 -53474964 + L2 LINE L2 3236 3313 0 2455 77 0 3 chr20 18679200 18679511 -53474371 + AluSq SINE Alu 1 310 -3 1766 55 0 9 chr20 18679738 18679958 -53473924 - AluY SINE Alu -4 307 90 622 300 34 69 chr20 18680424 18680675 -53473207 - LTR16C LTR ERVL -2 489 256 894 229 35 0 chr20 18680675 18680876 -53473006 + MER3 DNA MER1_type 2 209 0 622 300 34 69 chr20 18680876 18681031 -53472851 - LTR16C LTR ERVL -235 256 97 22 35 0 0 chr20 18681677 18681706 -53472176 + AT_rich Low_complexity Low_complexity 1 29 0 346 191 7 28 chr20 18682547 18682688 -53471194 + (TA)n Simple_repeat Simple_repeat 2 139 0 284 209 128 40 chr20 18683854 18684002 -53469880 + MER103 DNA DNA 4 164 -2 297 0 0 0 chr20 18685644 18685677 -53468205 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 2269 112 0 0 chr20 18687737 18688041 -53465841 - AluSq SINE Alu -9 304 1 762 161 0 31 chr20 18688108 18688238 -53465644 - FLAM_C SINE Alu -15 128 3 23 54 0 0 chr20 18688747 18688784 -53465098 + AT_rich Low_complexity Low_complexity 1 37 0 1505 197 54 39 chr20 18689652 18689724 -53464158 - MSTD LTR MaLR 0 396 327 213 39 0 0 chr20 18689724 18689750 -53464132 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 1505 197 54 39 chr20 18689750 18690067 -53463815 - MSTD LTR MaLR -69 327 1 380 181 56 49 chr20 18691002 18691146 -53462736 + Charlie7 DNA MER1_type 2440 2584 -28 2021 119 0 11 chr20 18691960 18692246 -53461636 + AluSx SINE Alu 26 308 -4 192 333 46 46 chr20 18692897 18692984 -53460898 + L2 LINE L2 3139 3225 -47 1494 96 9 37 chr20 18693926 18694144 -53459738 - AluSg/x SINE Alu -16 294 83 2378 76 0 0 chr20 18694229 18694520 -53459362 - AluY SINE Alu -20 291 1 180 0 0 0 chr20 18695189 18695209 -53458673 + (T)n Simple_repeat Simple_repeat 1 20 0 241 239 104 0 chr20 18696293 18696360 -53457522 + MER3 DNA MER1_type 41 114 -95 21 36 0 0 chr20 18696458 18696486 -53457396 + AT_rich Low_complexity Low_complexity 1 28 0 419 184 75 134 chr20 18696589 18696790 -53457092 - MER117 DNA MER1_type 0 197 9 247 164 0 36 chr20 18696876 18696931 -53456951 - HsTC2 DNA Tc2 -1843 55 3 2147 110 3 3 chr20 18697202 18697492 -53456390 + AluSx SINE Alu 1 290 -22 21 0 0 0 chr20 18698745 18698766 -53455116 + AT_rich Low_complexity Low_complexity 1 21 0 216 272 0 62 chr20 18699238 18699319 -53454563 - L2 LINE L2 -5 3267 3192 289 248 256 16 chr20 18699457 18699578 -53454304 - MIR SINE MIR -70 192 43 308 325 54 63 chr20 18699712 18700216 -53453666 - L2 LINE L2 -1079 2235 1737 363 23 0 0 chr20 18700860 18700904 -53452978 + (TG)n Simple_repeat Simple_repeat 2 45 0 270 0 0 0 chr20 18701511 18701541 -53452341 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 314 193 83 37 chr20 18702366 18702438 -53451444 - MER69 DNA AcHobo 0 2526 2446 2445 68 0 0 chr20 18702438 18702734 -53451148 + AluY SINE Alu 1 296 -15 314 193 83 37 chr20 18702734 18702770 -53451112 - MER69 DNA AcHobo -80 2446 2413 908 232 53 16 chr20 18702770 18703016 -53450866 - MER69 DNA AcHobo -340 2186 1932 710 193 44 0 chr20 18703027 18703162 -53450720 - MER69 DNA AcHobo -2385 141 1 270 0 0 0 chr20 18703301 18703331 -53450551 + (T)n Simple_repeat Simple_repeat 1 30 0 22 35 0 0 chr20 18703926 18703955 -53449927 + AT_rich Low_complexity Low_complexity 1 29 0 466 294 150 0 chr20 18704316 18704476 -53449406 - MER5A DNA MER1_type -2 187 4 2272 78 0 0 chr20 18705509 18705824 -53448058 - AluSq SINE Alu 0 315 1 606 259 14 0 chr20 18706445 18706592 -53447290 + MIR SINE MIR 48 196 -66 1402 99 9 24 chr20 18706726 18706939 -53446943 + L1PB2 LINE L1 5939 6148 -3 188 238 0 0 chr20 18706958 18707000 -53446882 + MIR SINE MIR 217 258 -4 323 200 40 13 chr20 18707087 18707162 -53446720 + MIR SINE MIR 186 262 0 303 261 168 25 chr20 18707575 18707694 -53446188 - MIR3 SINE MIR -14 194 59 567 273 52 32 chr20 18708764 18709021 -53444861 - LTR33 LTR ERVL -10 513 250 274 233 123 14 chr20 18709021 18709094 -53444788 - MER5B DNA MER1_type -14 164 84 338 267 187 6 chr20 18709178 18709323 -53444559 - LTR33A LTR ERVL -344 177 40 1028 100 3 11 chr20 18709671 18710031 -53443851 + (TA)n Simple_repeat Simple_repeat 1 357 0 24 0 0 0 chr20 18710031 18710055 -53443827 + AT_rich Low_complexity Low_complexity 1 24 0 1092 92 0 0 chr20 18710055 18710419 -53443463 + (TA)n Simple_repeat Simple_repeat 1 364 0 711 258 45 6 chr20 18711389 18711567 -53442315 - MIR SINE MIR -31 231 47 198 250 0 0 chr20 18711653 18711697 -53442185 - MER5A DNA MER1_type -110 79 36 957 221 192 46 chr20 18712743 18713196 -53440686 + LTR33A LTR ERVL 2 520 -3 205 161 0 0 chr20 18713802 18713833 -53440049 + (TGAA)n Simple_repeat Simple_repeat 3 33 0 1648 171 79 10 chr20 18715877 18716169 -53437713 - AluJo SINE Alu 0 312 1 648 195 15 103 chr20 18716640 18716835 -53437047 - MER45A DNA AcHobo 0 178 1 570 291 29 12 chr20 18717481 18717653 -53436229 - MLT1J1 LTR MaLR -2 444 270 5999 101 3 3 chr20 18717653 18718750 -53435132 - L1PA13 LINE L1 -5 6158 5055 5647 202 8 5 chr20 18718750 18719897 -53433985 + L1P LINE L1 1514 2663 -3483 814 300 69 4 chr20 18719897 18720157 -53433725 - MLT1J1 LTR MaLR -169 277 1 369 293 51 32 chr20 18720234 18720391 -53433491 + MIR SINE MIR 77 236 -26 1942 146 27 40 chr20 18720442 18720818 -53433064 - THE1C LTR MaLR -4 371 1 208 297 27 0 chr20 18720849 18720923 -53432959 + MIR SINE MIR 186 261 -1 2175 121 13 0 chr20 18721284 18721590 -53432292 + AluSq SINE Alu 1 310 -3 21 0 0 0 chr20 18721896 18721917 -53431965 + AT_rich Low_complexity Low_complexity 1 21 0 330 26 0 0 chr20 18721989 18722028 -53431854 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 2072 130 0 0 chr20 18722375 18722708 -53431174 - AluSx SINE Alu 0 333 1 2102 109 0 27 chr20 18722804 18723098 -53430784 + AluSg SINE Alu 1 286 -24 7531 221 14 0 chr20 18723202 18725354 -53428528 - L1PA16 LINE L1 -9 6157 3944 216 0 0 0 chr20 18725354 18725378 -53428504 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 7531 221 14 0 chr20 18725378 18725742 -53428140 - L1PA16 LINE L1 -2222 3944 3587 315 255 90 48 chr20 18729090 18729235 -53424647 + MIR SINE MIR 79 229 -33 489 291 6 63 chr20 18729645 18729820 -53424062 - MIR SINE MIR -56 206 42 216 325 49 57 chr20 18729830 18729953 -53423929 + L2 LINE L2 3146 3267 -5 1026 237 286 13 chr20 18731911 18732299 -53421583 - MLT1G1 LTR MaLR -2 593 100 1865 142 114 67 chr20 18732299 18732812 -53421070 + MER4B LTR ERV1 1 872 0 283 133 48 0 chr20 18732812 18732867 -53421015 - MLT1G LTR MaLR -495 63 1 298 337 156 22 chr20 18733096 18733366 -53420516 + L2 LINE L2 2539 2844 -470 1625 286 19 21 chr20 18733581 18734207 -53419675 - L2 LINE L2 0 3313 2693 262 298 38 46 chr20 18734286 18734417 -53419465 + L2 LINE L2 3184 3313 0 1701 152 47 17 chr20 18735095 18735391 -53418491 - AluJb SINE Alu -7 305 1 22 0 0 0 chr20 18736289 18736311 -53417571 + AT_rich Low_complexity Low_complexity 1 22 0 2080 272 103 81 chr20 18736894 18738189 -53415693 - L2 LINE L2 -1 3312 1987 1520 191 61 3 chr20 18738189 18738482 -53415400 + AluJo SINE Alu 1 310 -2 2080 272 103 81 chr20 18738482 18738631 -53415251 - L2 LINE L2 -1326 1987 1843 781 142 13 13 chr20 18738642 18738797 -53415085 + CT-rich Low_complexity Low_complexity 3 157 0 261 392 33 20 chr20 18739127 18739280 -53414602 + L2 LINE L2 3107 3261 -11 271 319 51 13 chr20 18739660 18739895 -53413987 - L1ME LINE L1 -246 5875 5632 2023 103 46 11 chr20 18739898 18740179 -53413703 + AluSx SINE Alu 6 296 -16 3482 161 40 23 chr20 18740227 18740428 -53413454 - L1MB2 LINE L1 -2 6169 5973 1678 158 0 0 chr20 18740428 18740682 -53413200 - AluJb SINE Alu -58 254 1 3482 161 40 23 chr20 18740682 18741188 -53412694 - L1MB2 LINE L1 -198 5973 5450 348 307 18 25 chr20 18741307 18741470 -53412412 - L1MB2 LINE L1 -736 5428 5267 1764 201 0 3 chr20 18741481 18741789 -53412093 - AluJb SINE Alu -5 307 1 2326 84 27 3 chr20 18741927 18742226 -53411656 - AluY SINE Alu -5 306 1 21 0 0 0 chr20 18743509 18743530 -53410352 + AT_rich Low_complexity Low_complexity 1 21 0 2359 93 0 7 chr20 18743718 18744028 -53409854 + AluSg SINE Alu 1 308 -2 21 36 0 0 chr20 18744619 18744647 -53409235 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr20 18745131 18745160 -53408722 + AT_rich Low_complexity Low_complexity 1 29 0 1694 185 26 6 chr20 18745412 18745758 -53408124 - MLT1A1 LTR MaLR -12 353 1 24 0 0 0 chr20 18745809 18745833 -53408049 + AT_rich Low_complexity Low_complexity 1 24 0 1031 69 0 0 chr20 18746150 18746280 -53407602 + AluSg SINE Alu 1 130 -180 2171 195 31 7 chr20 18746984 18747440 -53406442 - MLT1C LTR MaLR 0 467 1 2552 256 22 16 chr20 18747649 18748581 -53405301 - L1M4 LINE L1 -2136 4010 3073 2406 92 3 9 chr20 18750729 18751044 -53402838 - AluSq SINE Alu 0 313 1 28 0 0 0 chr20 18751260 18751288 -53402594 + AT_rich Low_complexity Low_complexity 1 28 0 458 317 34 15 chr20 18751347 18751754 -53402128 - MLT1J1 LTR MaLR -1 445 4 640 321 28 14 chr20 18752307 18752525 -53401357 + MIR SINE MIR 25 245 -17 2144 111 0 0 chr20 18753915 18754195 -53399687 + AluSx SINE Alu 1 280 -32 195 42 0 0 chr20 18754198 18754222 -53399660 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 3026 163 6 4 chr20 18754682 18755167 -53398715 + MER66B LTR ERV1 1 486 0 2184 116 10 0 chr20 18755765 18756066 -53397816 + AluSx SINE Alu 1 304 -8 1994 128 3 33 chr20 18756076 18756381 -53397501 + AluSx SINE Alu 1 296 -16 183 314 98 20 chr20 18756411 18756513 -53397369 - L2 LINE L2 -635 2679 2570 269 292 157 0 chr20 18757144 18757233 -53396649 + MIR SINE MIR 43 145 -117 251 186 68 51 chr20 18757798 18757857 -53396025 - MIR3 SINE MIR -15 193 134 411 204 88 41 chr20 18758587 18758734 -53395148 + MER112 DNA MER1_type 17 170 -90 231 362 103 21 chr20 18758806 18758968 -53394914 + MER5A DNA MER1_type 4 175 -3 1520 204 27 10 chr20 18759082 18759376 -53394506 - AluJb SINE Alu -13 299 1 821 274 58 4 chr20 18759447 18759673 -53394209 - MIR SINE MIR -10 252 15 195 204 0 0 chr20 18760763 18760812 -53393070 + (TG)n Simple_repeat Simple_repeat 2 50 0 1859 171 0 0 chr20 18761108 18761394 -53392488 + AluJo SINE Alu 1 286 -26 24 53 0 0 chr20 18762360 18762398 -53391484 + AT_rich Low_complexity Low_complexity 1 38 0 401 259 43 0 chr20 18764118 18764234 -53389648 + MIR SINE MIR 57 177 -85 236 254 62 72 chr20 18764256 18764449 -53389433 + L1MC4 LINE L1 7844 8034 -8 296 330 90 15 chr20 18764451 18764651 -53389231 - MLT1J LTR MaLR -264 247 33 497 323 135 33 chr20 18765344 18765673 -53388209 - L2 LINE L2 -1223 2091 1797 1899 152 0 10 chr20 18765673 18765970 -53387912 - AluJb SINE Alu -9 303 10 497 323 135 33 chr20 18765970 18766212 -53387670 - L2 LINE L2 -1517 1797 1462 183 42 0 0 chr20 18766312 18766336 -53387546 + (T)n Simple_repeat Simple_repeat 1 24 0 456 358 39 13 chr20 18766369 18766598 -53387284 - L3 LINE CR1 -683 894 660 184 265 72 72 chr20 18769746 18769829 -53384053 + MIR SINE MIR 32 114 -94 1571 267 85 35 chr20 18770794 18771333 -53382549 + L2 LINE L2 1971 2536 -778 218 175 0 0 chr20 18771493 18771533 -53382349 + G-rich Low_complexity Low_complexity 1 40 0 1817 152 76 0 chr20 18771882 18772172 -53381710 + AluSx SINE Alu 1 312 0 235 349 12 12 chr20 18773644 18773730 -53380152 + MIR SINE MIR 28 113 -95 216 0 0 0 chr20 18773867 18773891 -53379991 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 2291 86 7 7 chr20 18773971 18774263 -53379619 + AluSc SINE Alu 1 292 -17 298 316 118 15 chr20 18776164 18776300 -53377582 - MIR3 SINE MIR -21 187 38 2099 245 96 7 chr20 18776797 18777409 -53376473 - MER21B LTR ERV1 -54 809 143 2488 54 0 3 chr20 18777584 18777882 -53376000 + AluY SINE Alu 2 298 -13 460 366 61 0 chr20 18778126 18778339 -53375543 + MIR SINE MIR 22 247 -15 742 147 16 0 chr20 18778357 18778486 -53375396 + FLAM_C SINE Alu 3 133 0 26 34 0 51 chr20 18778523 18778582 -53375300 + AT_rich Low_complexity Low_complexity 1 56 0 795 174 0 0 chr20 18778587 18778708 -53375174 + FLAM_A SINE Alu 1 121 -12 289 341 68 0 chr20 18778720 18778808 -53375074 - L2 LINE L2 -19 3294 3201 1649 186 102 16 chr20 18778868 18779240 -53374642 - LTR32 LTR ERVL 0 471 68 1824 147 13 45 chr20 18779415 18779729 -53374153 + AluJo SINE Alu 1 304 -8 2190 125 0 7 chr20 18780263 18780568 -53373314 - AluSg SINE Alu -6 304 2 783 171 0 0 chr20 18781101 18781224 -53372658 + AluJo SINE Alu 1 123 -179 816 134 0 0 chr20 18781233 18781352 -53372530 + AluJo SINE Alu 183 301 -11 757 239 33 47 chr20 18781597 18781810 -53372072 - MIR SINE MIR -44 218 9 182 347 198 0 chr20 18781882 18782003 -53371879 - L3 LINE CR1 -425 1152 1008 2161 142 3 0 chr20 18782208 18782517 -53371365 + AluSx SINE Alu 1 310 -2 507 298 73 5 chr20 18782604 18782809 -53371073 - LTR33 LTR ERVL -302 219 1 273 57 0 0 chr20 18782829 18782864 -53371018 + (CA)n Simple_repeat Simple_repeat 1 35 0 296 276 13 0 chr20 18782954 18783030 -53370852 - L3 LINE CR1 -770 807 731 253 276 81 86 chr20 18783031 18783205 -53370677 + MER5B DNA MER1_type 1 173 -5 758 274 141 21 chr20 18783667 18784043 -53369839 - L2 LINE L2 -9 3304 2884 498 250 113 6 chr20 18784279 18784439 -53369443 - MER69A DNA AcHobo 0 177 1 227 313 27 41 chr20 18784886 18785033 -53368849 + G-rich Low_complexity Low_complexity 5 149 0 4292 163 16 29 chr20 18785273 18786162 -53367720 - L1MA4 LINE L1 -35 6447 5571 1793 155 0 0 chr20 18786202 18786466 -53367416 + AluSq SINE Alu 1 264 -49 234 0 0 0 chr20 18786471 18786497 -53367385 + (CAAAA)n Simple_repeat Simple_repeat 1 26 0 5446 193 22 50 chr20 18786579 18787818 -53366064 - L1MA4 LINE L1 -772 5556 4386 1000 167 0 98 chr20 18787818 18788052 -53365830 + AluJb SINE Alu 87 297 -15 5446 193 22 50 chr20 18788052 18788982 -53364900 - L1MA4 LINE L1 -1942 4386 3432 2587 164 18 0 chr20 18788981 18789437 -53364445 - L1MA4 LINE L1 -4862 466 3 * 1443 206 6 48 chr20 18789486 18789802 -53364080 - AluJb SINE Alu -9 303 1 513 179 45 0 chr20 18790035 18790169 -53363713 + CT-rich Low_complexity Low_complexity 3 142 0 21 0 0 0 chr20 18791128 18791149 -53362733 + AT_rich Low_complexity Low_complexity 1 21 0 325 267 15 59 chr20 18791714 18791849 -53362033 - L1ME1 LINE L1 -62 6104 5976 211 135 0 39 chr20 18791878 18791930 -53361952 + (GAA)n Simple_repeat Simple_repeat 2 51 0 236 237 52 101 chr20 18792733 18792810 -53361072 + Charlie8 DNA MER1_type 67 146 -1271 1512 124 146 25 chr20 18792810 18793084 -53360798 - AluSg1 SINE Alu -2 307 1 236 237 52 101 chr20 18793084 18793259 -53360623 + Charlie8 DNA MER1_type 146 1405 -12 2082 122 31 0 chr20 18793629 18793916 -53359966 + AluSq SINE Alu 1 296 -17 499 345 61 4 chr20 18794992 18795238 -53358644 + MIR SINE MIR 1 260 -2 782 190 103 17 chr20 18795273 18795447 -53358435 - MER5A DNA MER1_type 0 189 1 217 129 0 0 chr20 18797404 18797435 -53356447 - L2 LINE L2 -25 3247 3217 305 367 44 0 chr20 18797520 18797678 -53356204 - MIR SINE MIR -51 211 47 673 276 10 25 chr20 18799072 18799271 -53354611 + MER117 DNA MER1_type 1 196 -1 2347 77 3 10 chr20 18800996 18801308 -53352574 - AluY SINE Alu -1 310 1 188 275 25 62 chr20 18802082 18802162 -53351720 + MIR SINE MIR 67 143 -119 318 150 61 0 chr20 18802171 18802460 -53351422 + (TA)n Simple_repeat Simple_repeat 1 306 0 191 126 74 0 chr20 18802483 18802578 -53351304 + (TA)n Simple_repeat Simple_repeat 1 102 0 335 120 78 0 chr20 18802595 18802762 -53351120 + (TA)n Simple_repeat Simple_repeat 1 180 0 232 159 45 23 chr20 18802768 18802856 -53351026 + (TTATA)n Simple_repeat Simple_repeat 5 94 0 259 118 76 21 chr20 18802863 18803007 -53350875 + (TATAA)n Simple_repeat Simple_repeat 5 156 0 40 37 0 0 chr20 18803007 18803061 -53350821 + AT_rich Low_complexity Low_complexity 1 54 0 249 183 207 0 chr20 18804610 18804692 -53349190 + MER113 DNA MER1_type? 1 99 -422 232 67 0 0 chr20 18804807 18804837 -53349045 - U6 snRNA snRNA -77 30 1 404 268 46 0 chr20 18805246 18805399 -53348483 + MER117 DNA MER1_type 33 192 -5 284 29 0 0 chr20 18805666 18805701 -53348181 - MADE1 DNA Mariner 0 80 46 1072 169 27 0 chr20 18806452 18806636 -53347246 - MER5A DNA MER1_type 0 189 1 2168 112 7 0 chr20 18806837 18807133 -53346749 - AluSq SINE Alu -15 298 1 219 264 69 56 chr20 18807318 18807390 -53346492 + MER91C DNA MER1_type 36 108 -32 402 315 25 44 chr20 18808944 18809147 -53344735 - MIR3 SINE MIR -5 203 5 737 119 0 25 chr20 18809219 18809337 -53344545 - AluJb SINE Alu -3 309 195 350 135 0 0 chr20 18809363 18809415 -53344467 - AluJ/FLAM SINE Alu -245 57 6 732 194 14 33 chr20 18809469 18809680 -53344202 - L1MD3 LINE L1 -9 7986 7780 999 170 12 0 chr20 18809682 18809847 -53344035 - AluSg/x SINE Alu -11 299 133 545 203 58 7 chr20 18809869 18810007 -53343875 - L1MD3 LINE L1 -242 7753 7609 756 172 0 0 chr20 18810010 18810132 -53343750 - FRAM SINE Alu -20 156 35 205 49 0 49 chr20 18810139 18810180 -53343702 + (TA)n Simple_repeat Simple_repeat 1 39 0 339 65 0 0 chr20 18810214 18810260 -53343622 + (TC)n Simple_repeat Simple_repeat 2 47 0 311 196 22 29 chr20 18810337 18810475 -53343407 + CT-rich Low_complexity Low_complexity 1 137 0 2641 45 0 3 chr20 18811994 18812303 -53341579 + AluY SINE Alu 1 308 -3 2422 69 0 25 chr20 18813152 18813471 -53340411 - AluY SINE Alu 0 311 1 1128 249 72 25 chr20 18813974 18814014 -53339868 - L1ME3 LINE L1 -72 6090 6053 1633 182 0 0 chr20 18814014 18814278 -53339604 + AluJo SINE Alu 18 281 -31 1128 249 72 25 chr20 18814278 18814682 -53339200 - L1ME3 LINE L1 -109 6053 5625 496 199 73 52 chr20 18814727 18814883 -53338999 - L1ME3 LINE L1 -712 5458 5301 1896 99 102 7 chr20 18814883 18815167 -53338715 - AluSx SINE Alu -1 311 1 496 199 73 52 chr20 18815167 18815309 -53338573 - L1ME3 LINE L1 -869 5301 5164 263 296 28 37 chr20 18816115 18816223 -53337659 - MER5B DNA MER1_type -26 152 46 1042 164 16 6 chr20 18816285 18816468 -53337414 - MER5A DNA MER1_type -4 185 1 325 287 87 41 chr20 18816818 18817013 -53336869 + L1ME4a LINE L1 5872 6075 -46 369 0 0 0 chr20 18817065 18817106 -53336776 + (CA)n Simple_repeat Simple_repeat 2 42 0 1035 116 71 11 chr20 18817708 18818014 -53335868 - THE1C LTR MaLR 0 375 1 33 25 0 0 chr20 18818313 18818353 -53335529 + AT_rich Low_complexity Low_complexity 1 40 0 1070 224 143 0 chr20 18818382 18818619 -53335263 - AluSx SINE Alu -40 272 2 1249 130 87 154 chr20 18818699 18819069 -53334813 + MER2 DNA MER2_type 1 345 0 429 272 117 19 chr20 18819209 18819415 -53334467 - MLT1G1 LTR MaLR -9 533 308 * 2068 126 12 67 chr20 18819406 18819810 -53334072 - LTR9 LTR ERV1 -230 382 1 597 239 51 7 chr20 18819834 18820056 -53333826 - MLT1G1 LTR MaLR -314 235 8 207 160 40 20 chr20 18820063 18820113 -53333769 + CT-rich Low_complexity Low_complexity 1 51 0 227 318 151 0 chr20 18820704 18820830 -53333052 - MIR SINE MIR -50 212 68 2081 135 30 0 chr20 18820929 18821226 -53332656 - AluSx SINE Alu -6 306 1 223 316 73 52 chr20 18821414 18821550 -53332332 - L2 LINE L2 0 3272 3134 613 131 20 0 chr20 18821906 18822019 -53331863 - MSTC LTR MaLR -328 100 1 1044 153 4 121 chr20 18822669 18822917 -53330965 - MER20 DNA MER1_type 0 219 1 387 284 53 48 chr20 18823306 18823514 -53330368 - MIR SINE MIR -8 254 46 1545 235 58 29 chr20 18823862 18824343 -53329539 - MLT1D LTR MaLR -7 498 4 498 309 119 21 chr20 18824385 18824621 -53329261 + MIR SINE MIR 4 262 0 189 0 0 0 chr20 18825001 18825022 -53328860 + (T)n Simple_repeat Simple_repeat 1 21 0 351 0 0 0 chr20 18825166 18825205 -53328677 + (CA)n Simple_repeat Simple_repeat 2 40 0 520 229 60 18 chr20 18825239 18825405 -53328477 + MIR SINE MIR 76 248 -14 237 315 8 102 chr20 18826265 18826392 -53327490 + MIR3 SINE MIR 70 184 -24 417 35 87 17 chr20 18826553 18826668 -53327214 + (TA)n Simple_repeat Simple_repeat 1 123 0 1681 182 0 31 chr20 18826672 18826963 -53326919 - AluJo SINE Alu -30 282 1 339 356 31 19 chr20 18827505 18827665 -53326217 + MIR SINE MIR 20 181 -81 679 313 23 30 chr20 18827708 18827801 -53326081 - MIR SINE MIR 0 262 170 2243 162 40 38 chr20 18827801 18828228 -53325654 + MSTC LTR MaLR 1 428 0 679 313 23 30 chr20 18828228 18828396 -53325486 - MIR SINE MIR -92 170 3 359 356 94 36 chr20 18828498 18828725 -53325157 + L2 LINE L2 2477 2689 -583 441 54 0 0 chr20 18828725 18828781 -53325101 + (TG)n Simple_repeat Simple_repeat 2 57 0 359 356 94 36 chr20 18828781 18829105 -53324777 + L2 LINE L2 2689 3058 -214 282 206 0 0 chr20 18829116 18829179 -53324703 + (TATATG)n Simple_repeat Simple_repeat 6 68 0 2114 140 73 15 chr20 18829196 18829538 -53324344 + THE1B LTR MaLR 3 364 0 11914 94 1 1 chr20 18829538 18831116 -53322766 + THE1B-int LTR MaLR 1 1579 -1 2063 122 78 20 chr20 18831117 18831461 -53322421 + THE1B LTR MaLR 1 364 0 213 143 24 0 chr20 18832047 18832089 -53321793 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 193 27 81 27 chr20 18833455 18833492 -53320390 + T-rich Low_complexity Low_complexity 2 40 0 639 200 0 0 chr20 18833531 18833641 -53320241 - FLAM_C SINE Alu -32 111 2 256 253 11 32 chr20 18834774 18834869 -53319013 + MARNA DNA Mariner 170 262 -324 464 281 106 0 chr20 18834922 18835082 -53318800 + MIR SINE MIR 86 262 0 1989 137 27 0 chr20 18835785 18836078 -53317804 + AluSx SINE Alu 1 301 -11 22 0 0 0 chr20 18836534 18836556 -53317326 + AT_rich Low_complexity Low_complexity 1 22 0 33 43 0 0 chr20 18836586 18836633 -53317249 + AT_rich Low_complexity Low_complexity 1 47 0 3054 140 2 59 chr20 18837011 18837554 -53316328 - MER41E LTR ERV1 0 512 1 2428 93 0 0 chr20 18838205 18838515 -53315367 - AluSg SINE Alu 0 310 1 226 146 24 0 chr20 18839603 18839644 -53314238 + (TCCA)n Simple_repeat Simple_repeat 2 43 0 193 274 0 0 chr20 18839644 18839695 -53314187 - L2 LINE L2 0 3313 3263 222 318 0 35 chr20 18840477 18840562 -53313320 + L3b LINE CR1 1428 1509 -74 289 259 37 0 chr20 18841798 18841879 -53312003 + (CATA)n Simple_repeat Simple_repeat 3 86 0 409 279 74 35 chr20 18841993 18842222 -53311660 - LTR33 LTR ERVL -235 286 49 410 195 0 13 chr20 18842229 18842306 -53311576 + FLAM SINE Alu 54 129 -14 884 158 0 0 chr20 18842560 18842693 -53311189 + FLAM_C SINE Alu 1 133 0 775 188 0 0 chr20 18843097 18843235 -53310647 + FLAM_C SINE Alu 1 138 -5 21 0 0 0 chr20 18843235 18843256 -53310626 + AT_rich Low_complexity Low_complexity 1 21 0 686 248 88 8 chr20 18843349 18843712 -53310170 + L1M4 LINE L1 2799 3190 -2956 15943 137 115 36 chr20 18844127 18847080 -53306802 + L1M1 LINE L1 15 3232 -4333 1494 181 90 4 chr20 18847080 18847357 -53306525 + AluJo SINE Alu 1 301 -11 15943 137 115 36 chr20 18847357 18847540 -53306342 + L1M1 LINE L1 3232 3399 -4166 2875 13 0 0 chr20 18848045 18848363 -53305519 + AluYb8 SINE Alu 1 318 0 301 232 0 12 chr20 18848374 18848456 -53305426 + L1ME3A LINE L1 6073 6153 -17 25 51 0 0 chr20 18849209 18849248 -53304634 + AT_rich Low_complexity Low_complexity 1 39 0 1443 102 5 0 chr20 18849420 18849636 -53304246 - L1PB1 LINE L1 -2 6149 5933 345 47 0 0 chr20 18849649 18849692 -53304190 + (CA)n Simple_repeat Simple_repeat 1 43 0 3210 92 6 4 chr20 18849693 18850180 -53303702 - L1PB1 LINE L1 -372 5779 5292 272 261 0 0 chr20 18850324 18850393 -53303489 - Charlie8 DNA MER1_type -8 2409 2341 354 216 18 54 chr20 18850504 18850615 -53303267 - Charlie8 DNA MER1_type -2204 213 107 288 264 0 35 chr20 18851017 18851104 -53302778 - L2 LINE L2 -1 3312 3229 3135 171 42 23 chr20 18851235 18851926 -53301956 + LTR8A LTR ERV1 1 704 -23 369 0 0 0 chr20 18853845 18853886 -53299996 + (TG)n Simple_repeat Simple_repeat 2 42 0 2258 143 115 2 chr20 18853886 18854354 -53299528 + L1MA9 LINE L1 5788 6312 0 2456 85 0 0 chr20 18854786 18855093 -53298789 + AluY SINE Alu 1 307 -4 345 257 46 37 chr20 18855239 18855439 -53298443 - LTR33A LTR ERVL 0 523 353 182 347 13 0 chr20 18855646 18855721 -53298161 - L2 LINE L2 -2992 322 247 743 170 0 0 chr20 18855905 18856017 -53297865 + FLAM_C SINE Alu 4 115 -28 367 111 0 0 chr20 18856025 18856079 -53297803 - MLT1C LTR MaLR -379 88 35 23 0 0 0 chr20 18856084 18856107 -53297775 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr20 18857474 18857496 -53296386 + AT_rich Low_complexity Low_complexity 1 22 0 297 310 0 0 chr20 18858979 18859066 -53294816 + GA-rich Low_complexity Low_complexity 1 87 0 266 245 47 28 chr20 18859707 18859813 -53294069 + MLT1K LTR MaLR 470 577 -11 361 188 65 65 chr20 18860842 18860980 -53292902 + MLT1K LTR MaLR 158 295 -293 1502 251 60 10 chr20 18861110 18861509 -53292373 + LTR16A LTR ERVL 32 450 0 1284 162 8 8 chr20 18864101 18864336 -53289546 + MSTB LTR MaLR 1 235 -191 2577 104 3 0 chr20 18864336 18864690 -53289192 - THE1A LTR MaLR 0 355 1 11779 91 9 1 chr20 18864692 18866257 -53287625 - THE1A-int LTR MaLR -2 1578 1 299 98 0 20 chr20 18866257 18866308 -53287574 - MLT2A1 LTR ERVL 0 453 404 183 42 0 0 chr20 18866308 18866332 -53287550 + (GA)n Simple_repeat Simple_repeat 2 25 0 1494 51 37 9 chr20 18866368 18866584 -53287298 - MLT2A1 LTR ERVL -222 222 1 1015 172 25 10 chr20 18866584 18866777 -53287105 + MSTB LTR MaLR 231 426 0 1368 204 25 48 chr20 18867459 18867851 -53286031 - MER58D DNA MER1_type -3 383 1 533 102 0 51 chr20 18868178 18868237 -53285645 + L1MC2 LINE L1 5865 5919 -425 1943 168 12 9 chr20 18868237 18868583 -53285299 - MER7A DNA MER2_type 0 346 2 533 102 0 51 chr20 18868583 18868621 -53285261 + L1MC2 LINE L1 5919 5957 -387 308 308 0 11 chr20 18868630 18868721 -53285161 + L1MC4 LINE L1 6614 6703 -1339 296 284 17 0 chr20 18868736 18868852 -53285030 + (TATATG)n Simple_repeat Simple_repeat 3 120 0 287 384 0 0 chr20 18868852 18868964 -53284918 + (CATATA)n Simple_repeat Simple_repeat 1 112 0 280 259 15 30 chr20 18868990 18869125 -53284757 + (TATATG)n Simple_repeat Simple_repeat 2 134 0 336 256 26 34 chr20 18869126 18869243 -53284639 - L1MC4 LINE L1 -1313 6729 6614 702 119 0 0 chr20 18869262 18869363 -53284519 - U6 snRNA snRNA -6 101 1 1763 144 88 3 chr20 18869365 18869718 -53284164 + L1MC2 LINE L1 5953 6335 -9 742 164 42 1 chr20 18870382 18870555 -53283327 - L1MC2 LINE L1 -237 6107 5951 724 108 0 0 chr20 18870555 18870657 -53283225 + U6 snRNA snRNA 1 102 -5 198 103 0 0 chr20 18870663 18870692 -53283190 + (TA)n Simple_repeat Simple_repeat 1 29 0 2443 110 49 0 chr20 18871193 18871539 -53282343 - THE1B LTR MaLR -1 363 1 283 250 38 0 chr20 18871612 18871692 -53282190 + MIR SINE MIR 123 205 -57 231 294 118 17 chr20 18871900 18872019 -53281863 - MIR SINE MIR -13 249 119 305 156 0 16 chr20 18872046 18872110 -53281772 + GA-rich Low_complexity Low_complexity 1 63 0 22 35 0 0 chr20 18872227 18872256 -53281626 + AT_rich Low_complexity Low_complexity 1 29 0 35 0 0 0 chr20 18872302 18872337 -53281545 + AT_rich Low_complexity Low_complexity 1 35 0 23 0 0 0 chr20 18872901 18872924 -53280958 + AT_rich Low_complexity Low_complexity 1 23 0 845 129 65 129 chr20 18873348 18873580 -53280302 - MER20 DNA MER1_type -1 218 2 44 0 0 0 chr20 18874194 18874238 -53279644 + AT_rich Low_complexity Low_complexity 1 44 0 383 298 107 8 chr20 18875134 18875235 -53278647 + MIR SINE MIR 32 148 -114 210 71 0 0 chr20 18875235 18875263 -53278619 + (TGG)n Simple_repeat Simple_repeat 3 30 0 383 298 107 8 chr20 18875263 18875282 -53278600 + MIR SINE MIR 148 164 -98 800 81 52 37 chr20 18875301 18875437 -53278445 + FLAM_C SINE Alu 6 143 0 1660 287 89 7 chr20 18875459 18876066 -53277816 - MER115 DNA AcHobo -4 689 33 193 318 0 30 chr20 18876117 18876183 -53277699 + MIR SINE MIR 199 262 0 * 489 346 63 63 chr20 18876178 18876623 -53277259 - L2 LINE L2 -21 3251 2807 277 321 7 58 chr20 18876873 18877010 -53276872 + L2 LINE L2 2954 3083 -189 797 208 67 11 chr20 18877081 18877259 -53276623 - MER5A DNA MER1_type -1 188 1 292 250 0 29 chr20 18877467 18877535 -53276347 + L2 LINE L2 3201 3266 -6 1770 119 36 0 chr20 18877552 18877803 -53276079 + AluSc SINE Alu 40 299 -10 446 304 58 0 chr20 18877829 18877967 -53275915 + LTR16C LTR ERVL 51 196 -295 631 169 99 63 chr20 18877967 18878109 -53275773 + AluJo SINE Alu 86 232 -80 469 274 45 6 chr20 18878113 18878270 -53275612 + LTR16C LTR ERVL 211 373 -118 303 28 0 0 chr20 18878356 18878392 -53275490 + (TAGA)n Simple_repeat Simple_repeat 4 39 0 6838 178 77 9 chr20 18878554 18880125 -53273757 - MER52A LTR ERV1 0 1755 1 3597 144 16 2 chr20 18880345 18880958 -53272924 + L1MB4 LINE L1 5559 6180 0 293 310 41 18 chr20 18882562 18882733 -53271149 - L1ME LINE L1 -365 5756 5582 1721 176 0 31 chr20 18882815 18883134 -53270748 + AluJb SINE Alu 1 309 -3 861 207 21 27 chr20 18884057 18884245 -53269637 + MER5A DNA MER1_type 3 189 0 46 99 0 0 chr20 18884577 18884728 -53269154 + AT_rich Low_complexity Low_complexity 1 151 0 277 215 141 136 chr20 18885394 18885530 -53268352 + MIR SINE MIR 32 171 -91 1343 149 20 8 chr20 18885530 18885785 -53268097 + L1MA6 LINE L1 6039 6296 -4 277 215 141 136 chr20 18885785 18885839 -53268043 + MIR SINE MIR 171 223 -39 1867 208 44 10 chr20 18886679 18887284 -53266598 - MER39 LTR ERV1 0 707 1 1706 76 0 0 chr20 18887825 18888036 -53265846 + AluY SINE Alu 89 299 -12 1652 142 50 43 chr20 18889161 18889443 -53264439 - AluJo SINE Alu -24 288 5 21 0 0 0 chr20 18889449 18889470 -53264412 + AT_rich Low_complexity Low_complexity 1 21 0 328 249 11 90 chr20 18890929 18891118 -53262764 + Charlie8 DNA MER1_type 92 265 -2152 2147 192 59 84 chr20 18891412 18892069 -53261813 - MER21B LTR ERV1 -222 641 1 576 253 42 21 chr20 18892158 18892348 -53261534 + LTR33 LTR ERVL 1 194 -327 492 274 60 0 chr20 18892397 18892565 -53261317 + LTR33 LTR ERVL 342 519 -2 21 0 0 0 chr20 18892594 18892615 -53261267 + AT_rich Low_complexity Low_complexity 1 21 0 207 0 0 0 chr20 18892834 18892857 -53261025 + (GAAAA)n Simple_repeat Simple_repeat 2 24 0 225 0 0 0 chr20 18893423 18893448 -53260434 + (T)n Simple_repeat Simple_repeat 1 25 0 24 32 0 0 chr20 18893875 18893906 -53259976 + AT_rich Low_complexity Low_complexity 1 31 0 558 256 14 76 chr20 18895540 18895685 -53258197 + MLT1I LTR MaLR 201 329 -80 1846 145 3 56 chr20 18895685 18896009 -53257873 + AluSx SINE Alu 1 307 -5 558 256 14 76 chr20 18896009 18896086 -53257796 + MLT1I LTR MaLR 329 409 0 283 259 63 70 chr20 18896086 18896244 -53257638 + MIR SINE MIR 48 204 -58 310 215 0 0 chr20 18896298 18896363 -53257519 - U3 snRNA snRNA -152 65 1 200 196 0 20 chr20 18896983 18897034 -53256848 + GA-rich Low_complexity Low_complexity 6 55 0 295 281 76 22 chr20 18897047 18897232 -53256650 - Charlie8 DNA MER1_type -2156 261 67 2364 102 0 0 chr20 18897369 18897673 -53256209 + AluSx SINE Alu 1 304 -8 873 81 0 24 chr20 18898237 18898360 -53255522 - AluY SINE Alu -4 307 188 549 0 0 0 chr20 18899042 18899103 -53254779 + (TG)n Simple_repeat Simple_repeat 2 62 0 1320 230 3 13 chr20 18899136 18899449 -53254433 - MLT2C1 LTR ERVL -87 310 1 2199 94 7 13 chr20 18899456 18899754 -53254128 - AluSc SINE Alu -13 296 1 14693 138 18 5 chr20 18899992 18902379 -53251503 + Tigger1 DNA MER2_type 1 2418 0 1101 147 6 0 chr20 18902487 18902650 -53251232 - AluSg/x SINE Alu -12 300 137 2376 103 0 0 chr20 18902650 18902951 -53250931 - AluSq SINE Alu -10 303 3 291 299 51 36 chr20 18903028 18903165 -53250717 + MIR3 SINE MIR 36 174 -34 2305 80 31 0 chr20 18903501 18903790 -53250092 - AluSx SINE Alu -14 298 1 451 294 35 0 chr20 18904127 18904270 -53249612 + MLT1J LTR MaLR 96 243 -268 943 153 27 6 chr20 18906095 18906278 -53247604 - MER53 DNA DNA 0 189 3 211 200 0 0 chr20 18906644 18906684 -53247198 + L2 LINE L2 3268 3307 -6 2083 117 47 3 chr20 18906819 18907118 -53246764 + AluSx SINE Alu 1 312 0 1286 235 75 5 chr20 18907878 18908359 -53245523 + MLT2E LTR ERVL 21 581 -47 887 259 41 13 chr20 18908977 18909322 -53244560 + LTR16C LTR ERVL 100 487 -4 672 209 37 27 chr20 18909962 18910149 -53243733 + MER53 DNA DNA 1 189 0 561 272 0 0 chr20 18910349 18910474 -53243408 - L2 LINE L2 0 3313 3189 262 316 10 41 chr20 18911678 18911776 -53242106 - MIR3 SINE MIR -46 162 68 2493 56 3 0 chr20 18913077 18913381 -53240501 + AluY SINE Alu 1 305 -6 2335 95 0 13 chr20 18913821 18914137 -53239745 - AluSx SINE Alu 0 312 1 275 247 13 13 chr20 18914147 18914224 -53239658 - MLT1H LTR MaLR -341 208 132 2135 120 0 7 chr20 18914301 18914601 -53239281 + AluSx SINE Alu 1 298 -14 2164 116 0 0 chr20 18915026 18915353 -53238529 - AluSx SINE Alu 0 327 1 2262 168 68 2 chr20 18916113 18916513 -53237369 + MSTB LTR MaLR 1 426 0 8553 161 36 25 chr20 18916513 18918145 -53235737 + MSTB-int LTR MaLR 1 1651 0 2056 182 76 2 chr20 18918145 18918541 -53235341 + MSTB LTR MaLR 1 425 -1 274 291 162 0 chr20 18919063 18919180 -53234702 + L2 LINE L2 3122 3257 -15 1671 219 64 5 chr20 18920517 18920891 -53232991 + MSTD LTR MaLR 1 396 0 396 0 0 0 chr20 18921170 18921214 -53232668 + (CA)n Simple_repeat Simple_repeat 2 45 0 1643 172 30 56 chr20 18921818 18922516 -53231366 + MER21B LTR ERV1 89 845 -18 276 287 19 9 chr20 18923108 18923216 -53230666 - MLT1L LTR MaLR -25 590 482 271 254 16 63 chr20 18923360 18923486 -53230396 - MLT1L LTR MaLR -348 267 148 409 316 75 7 chr20 18923770 18924185 -53229697 - L1ME4a LINE L1 -136 5985 5543 224 155 0 17 chr20 18924541 18924599 -53229283 + (TGAA)n Simple_repeat Simple_repeat 3 59 0 1558 152 5 0 chr20 18926425 18926649 -53227233 - AluSq SINE Alu -88 225 1 2644 309 170 26 chr20 18926651 18927819 -53226063 + L2 LINE L2 333 1331 -1983 414 0 0 0 chr20 18927819 18927865 -53226017 + (TAAA)n Simple_repeat Simple_repeat 2 47 0 2644 309 170 26 chr20 18927865 18928576 -53225306 + L2 LINE L2 1331 2483 -831 258 206 14 27 chr20 18928611 18928684 -53225198 + L2 LINE L2 2468 2539 -775 367 314 19 9 chr20 18928693 18928798 -53225084 + L2 LINE L2 3168 3273 -40 1171 176 24 8 chr20 18928833 18929083 -53224799 + MER58B DNA MER1_type 73 326 -15 397 350 75 59 chr20 18929136 18929390 -53224492 - MLT1K LTR MaLR -298 290 33 207 0 0 0 chr20 18930227 18930250 -53223632 + (T)n Simple_repeat Simple_repeat 1 23 0 636 237 47 24 chr20 18930862 18931031 -53222851 - MLT2E LTR ERVL -437 191 19 2179 114 7 7 chr20 18931763 18932071 -53221811 - AluSq SINE Alu -5 308 1 280 242 42 100 chr20 18932133 18932253 -53221629 + MLT1I LTR MaLR 278 390 -19 2862 206 52 11 chr20 18932546 18933270 -53220612 + L1M4 LINE L1 4563 5316 -830 446 0 19 0 chr20 18933562 18933616 -53220266 + (CA)n Simple_repeat Simple_repeat 2 56 0 549 215 23 154 chr20 18933638 18933852 -53220030 + MER5A DNA MER1_type 4 189 0 291 322 81 31 chr20 18934396 18934609 -53219273 + MIR SINE MIR 20 241 -21 306 200 21 21 chr20 18934748 18934843 -53219039 + (TCTA)n Simple_repeat Simple_repeat 3 97 0 359 297 22 66 chr20 18934914 18935325 -53218557 + L1MC4a LINE L1 4645 5037 -1109 508 344 45 25 chr20 18935580 18936051 -53217831 + L1MC4a LINE L1 5352 5831 -1977 499 14 14 14 chr20 18936086 18936155 -53217727 + (TA)n Simple_repeat Simple_repeat 2 70 0 557 326 93 46 chr20 18938544 18939004 -53214878 + LTR16C LTR ERVL 8 489 -2 100 55 0 0 chr20 18940029 18940192 -53213690 + AT_rich Low_complexity Low_complexity 1 163 0 355 224 58 96 chr20 18941327 18941483 -53212399 + MER103 DNA DNA 16 165 -1 308 270 230 0 chr20 18941514 18941686 -53212196 - MIR SINE MIR -10 252 42 207 132 19 57 chr20 18942277 18942330 -53211552 + T-rich Low_complexity Low_complexity 2 52 0 340 266 23 39 chr20 18942591 18942719 -53211163 + MIR SINE MIR 20 145 -63 2556 65 3 0 chr20 18942768 18943078 -53210804 - AluY SINE Alu 0 311 1 2345 71 0 0 chr20 18943194 18943520 -53210362 - AluY SINE Alu 0 326 1 282 29 0 0 chr20 18943561 18943596 -53210286 + (TG)n Simple_repeat Simple_repeat 2 36 0 299 105 18 0 chr20 18944149 18944206 -53209676 + (TA)n Simple_repeat Simple_repeat 2 59 0 2019 146 0 13 chr20 18944207 18944509 -53209373 - AluSx SINE Alu -8 304 7 2262 116 0 0 chr20 18944512 18944813 -53209069 - AluSx SINE Alu -9 303 3 721 261 23 40 chr20 18945819 18945995 -53207887 + MER45A DNA AcHobo 6 178 0 389 350 118 24 chr20 18946286 18946575 -53207307 - L2 LINE L2 -38 3234 2919 1543 185 5 93 chr20 18946902 18947312 -53206570 + MLT1A2 LTR MaLR 1 374 0 1516 160 57 143 chr20 18947316 18947790 -53206092 + MLT1A2-int LTR MaLR 5 437 -934 752 126 0 25 chr20 18947794 18947913 -53205969 - FLAM_C SINE Alu 0 143 28 454 217 0 0 chr20 18947988 18948071 -53205811 + Tigger5 DNA MER2_type 2237 2319 -4 473 274 136 16 chr20 18949740 18950152 -53203730 + L1ME1 LINE L1 5188 5651 -511 415 242 116 56 chr20 18950205 18950420 -53203462 - MER112 DNA MER1_type -31 229 2 327 290 51 37 chr20 18950457 18950671 -53203211 + L1ME1 LINE L1 5706 5922 -244 23 33 0 0 chr20 18950709 18950739 -53203143 + AT_rich Low_complexity Low_complexity 1 30 0 336 239 316 0 chr20 18950852 18950969 -53202913 - MLT1L LTR MaLR -58 557 404 490 320 140 22 chr20 18951290 18951655 -53202227 - L2 LINE L2 -58 3255 2848 203 271 21 42 chr20 18951708 18951804 -53202078 - L2 LINE L2 -705 2609 2516 948 284 192 23 chr20 18952786 18953265 -53200617 - MLT1K LTR MaLR -10 578 19 238 316 149 0 chr20 18953466 18953580 -53200302 - MIR SINE MIR -52 210 80 819 192 9 58 chr20 18953584 18953808 -53200074 + L1MA7 LINE L1 6068 6280 -11 191 330 33 22 chr20 18954421 18954512 -53199370 + L2 LINE L2 3214 3305 -8 210 158 0 0 chr20 18955685 18955723 -53198159 + T-rich Low_complexity Low_complexity 1 38 0 528 241 135 55 chr20 18955747 18955984 -53197898 + MIR SINE MIR 2 257 -5 293 364 60 24 chr20 18956244 18956494 -53197388 + L2 LINE L2 2525 2783 -531 374 304 13 9 chr20 18956543 18956668 -53197214 - MIR SINE MIR -72 136 8 900 224 41 18 chr20 18956688 18956907 -53196975 + MER58A DNA MER1_type 1 224 0 619 249 29 17 chr20 18958607 18958780 -53195102 - MIR SINE MIR -3 259 85 2133 121 3 0 chr20 18958867 18959173 -53194709 - AluSg SINE Alu -3 307 1 262 342 145 20 chr20 18960170 18960322 -53193560 - MIR SINE MIR -74 188 18 1295 168 43 12 chr20 18960332 18960654 -53193228 - L1MB3 LINE L1 -10 6173 5862 336 24 0 0 chr20 18960654 18960695 -53193187 + (TG)n Simple_repeat Simple_repeat 2 42 0 1295 168 43 12 chr20 18960695 18960936 -53192946 - L1MB3 LINE L1 -321 5862 5544 333 0 0 0 chr20 18961467 18961504 -53192378 + (TG)n Simple_repeat Simple_repeat 1 37 0 1479 263 142 17 chr20 18961945 18962424 -53191458 + MLT1E LTR MaLR 55 593 0 303 248 20 30 chr20 18962766 18962867 -53191015 + LTR67 LTR ERVL 458 557 0 1667 163 33 20 chr20 18962926 18963227 -53190655 - AluJb SINE Alu -7 305 1 2288 171 4 42 chr20 18963875 18964064 -53189818 + Tigger2a DNA MER2_type 1 196 -2512 2145 110 0 10 chr20 18964064 18964355 -53189527 + AluSp SINE Alu 1 288 -25 2288 171 4 42 chr20 18964355 18964616 -53189266 + Tigger2a DNA MER2_type 196 434 0 2206 112 0 0 chr20 18965900 18966194 -53187688 - AluSc SINE Alu -15 294 1 247 264 0 0 chr20 18967965 18968018 -53185864 + (TG)n Simple_repeat Simple_repeat 1 53 0 2255 115 0 3 chr20 18968933 18969245 -53184637 + AluSq SINE Alu 1 311 -2 420 238 107 0 chr20 18970703 18970825 -53183057 - MER3 DNA MER1_type 0 209 75 290 345 74 19 chr20 18970817 18971071 -53182811 + MLT1K LTR MaLR 220 514 -101 1307 197 51 3 chr20 18971071 18971385 -53182497 + MER33 DNA MER1_type 1 321 -3 380 245 10 10 chr20 18971393 18971491 -53182391 + MLT1K LTR MaLR 490 587 -1 25 65 0 0 chr20 18972363 18972409 -53181473 + AT_rich Low_complexity Low_complexity 1 46 0 22 70 0 0 chr20 18972795 18972838 -53181044 + AT_rich Low_complexity Low_complexity 1 43 0 198 103 0 0 chr20 18973151 18973180 -53180702 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 339 218 35 0 chr20 18973290 18973377 -53180505 - MER97a DNA MER1_type? -16 878 789 3241 192 39 28 chr20 18973389 18974103 -53179779 - L1MB7 LINE L1 -17 6167 5446 1051 252 116 7 chr20 18974103 18974535 -53179347 - MER97c DNA MER1_type? -117 777 299 960 239 24 0 chr20 18974567 18974780 -53179102 - MER97c DNA MER1_type? -863 227 10 1670 242 69 63 chr20 18975062 18975600 -53178282 - MLT1F LTR MaLR 0 542 2 221 83 28 0 chr20 18977944 18977980 -53175902 + (TCCA)n Simple_repeat Simple_repeat 3 39 0 297 51 0 0 chr20 18979050 18979089 -53174793 + MADE1 DNA Mariner 42 80 0 257 267 82 7 chr20 18979195 18979341 -53174541 + HAL1b LINE L1 667 823 -525 319 350 58 39 chr20 18979650 18980061 -53173821 + L1ME LINE L1 2200 2618 -3528 229 320 89 0 chr20 18980190 18980393 -53173489 + L1ME LINE L1 2708 2928 -3218 248 348 97 22 chr20 18980458 18980777 -53173105 + L1ME LINE L1 4674 5016 -1130 344 279 35 75 chr20 18981305 18981506 -53172376 + L1ME LINE L1 5582 5774 -347 2317 67 13 0 chr20 18981609 18981908 -53171974 - AluY SINE Alu -8 303 1 541 56 0 0 chr20 18981945 18982016 -53171866 + Alu SINE Alu 1 71 -240 22080 26 5 0 chr20 18982016 18985426 -53168456 + L1PA3 LINE L1 2734 6155 0 226 237 34 0 chr20 18987853 18987912 -53165970 - MER94 DNA DNA 0 134 74 254 228 0 119 chr20 18988719 18988921 -53164961 + (CATATA)n Simple_repeat Simple_repeat 2 179 0 233 331 6 25 chr20 18988935 18989098 -53164784 + (CATATA)n Simple_repeat Simple_repeat 5 164 0 328 354 55 30 chr20 18989771 18989935 -53163947 + L2 LINE L2 3100 3267 -5 7195 45 6 6 chr20 18990218 18991297 -53162585 - L1PA5 LINE L1 -3 6151 5073 1370 87 41 27 chr20 18991553 18991772 -53162110 + MER30 DNA MER1_type 2 223 -7 23 0 0 0 chr20 18991828 18991851 -53162031 + AT_rich Low_complexity Low_complexity 1 23 0 576 167 42 0 chr20 18991859 18991955 -53161927 - AluJ/FLAM SINE Alu -212 100 1 28 0 0 0 chr20 18992106 18992134 -53161748 + AT_rich Low_complexity Low_complexity 1 28 0 277 149 43 43 chr20 18992540 18992634 -53161248 + (CTATA)n Simple_repeat Simple_repeat 2 95 0 41 36 0 0 chr20 18993446 18993501 -53160381 + AT_rich Low_complexity Low_complexity 1 55 0 25 51 0 0 chr20 18993716 18993755 -53160127 + AT_rich Low_complexity Low_complexity 1 39 0 2021 74 282 6 chr20 18995398 18995749 -53158133 - LTR7 LTR ERV1 -2 448 1 2291 92 45 18 chr20 18995749 18996129 -53157753 - HERVH LTR ERV1 0 7713 7324 1230 157 19 0 chr20 18996129 18996345 -53157537 - HERVH LTR ERV1 -1894 5819 5600 4037 151 0 1 chr20 18996346 18997009 -53156873 - HERVH LTR ERV1 -2564 5149 4488 5985 82 1 2 chr20 18997011 18997866 -53156016 - HERVH LTR ERV1 -3720 3993 3140 * 19234 95 14 18 chr20 18997845 19000853 -53153029 - HERVH LTR ERV1 -4718 2995 1 1984 86 282 6 chr20 19000855 19001206 -53152676 - LTR7 LTR ERV1 -2 448 1 1034 243 43 27 chr20 19001300 19001629 -53152253 + L1ME3A LINE L1 5836 6169 -1 1657 203 25 11 chr20 19002178 19002538 -53151344 - MLT1A1 LTR MaLR 0 365 1 186 315 0 0 chr20 19002635 19002689 -53151193 + MIR SINE MIR 13 66 -196 411 318 104 65 chr20 19003025 19003428 -53150454 + L2 LINE L2 2811 3229 -43 1198 196 43 97 chr20 19004775 19005167 -53148715 - MLT1A2 LTR MaLR 0 374 4 738 264 254 3 chr20 19005386 19005720 -53148162 + LTR33 LTR ERVL 76 493 -28 241 280 13 0 chr20 19005965 19006040 -53147842 + (TAA)n Simple_repeat Simple_repeat 1 76 0 283 296 31 43 chr20 19006058 19006220 -53147662 - MIR SINE MIR -50 212 53 180 269 0 39 chr20 19007400 19007452 -53146430 - L2 LINE L2 -95 3218 3169 201 156 0 0 chr20 19007458 19007490 -53146392 + (CA)n Simple_repeat Simple_repeat 1 32 0 450 274 126 6 chr20 19008774 19008949 -53144933 + MIR SINE MIR 53 248 -14 31 26 0 0 chr20 19009028 19009066 -53144816 + AT_rich Low_complexity Low_complexity 1 38 0 212 130 22 0 chr20 19009069 19009115 -53144767 + (TATAA)n Simple_repeat Simple_repeat 2 48 0 377 268 91 129 chr20 19009787 19010291 -53143591 + L1MEd LINE L1 114 598 -5607 303 333 24 16 chr20 19010377 19010500 -53143382 + L1MEd LINE L1 1567 1690 -4706 311 267 45 102 chr20 19010863 19011039 -53142843 + L1MEd LINE L1 2181 2346 -4050 405 340 67 8 chr20 19011081 19011319 -53142563 + L1MEd LINE L1 2554 2805 -3410 538 243 107 63 chr20 19011319 19011525 -53142357 + MER58C DNA MER1_type 1 215 0 659 259 15 41 chr20 19011566 19011763 -53142119 - L2 LINE L2 -6 3307 3116 1108 189 112 40 chr20 19011814 19012136 -53141746 - MER2 DNA MER2_type 0 345 1 305 262 90 83 chr20 19012243 19012317 -53141565 + L1MEd LINE L1 3077 3149 -3066 1735 179 7 17 chr20 19012317 19012614 -53141268 + AluJo SINE Alu 1 294 -18 305 262 90 83 chr20 19012614 19012829 -53141053 + L1MEd LINE L1 3149 3368 -2847 2086 145 0 0 chr20 19012877 19013167 -53140715 + AluSx SINE Alu 1 290 -22 238 277 107 55 chr20 19013179 19013489 -53140393 + L1MEd LINE L1 3439 3764 -2451 22 56 0 0 chr20 19013506 19013542 -53140340 + AT_rich Low_complexity Low_complexity 1 36 0 1106 203 78 17 chr20 19013613 19013908 -53139974 + L1MB7 LINE L1 5809 6121 -63 1408 200 52 14 chr20 19013913 19014258 -53139624 + MLT1A1 LTR MaLR 6 363 -2 243 293 71 25 chr20 19014278 19014476 -53139406 + L1MEd LINE L1 3944 4150 -2065 336 112 118 33 chr20 19014540 19014692 -53139190 + (TTTAA)n Simple_repeat Simple_repeat 1 165 0 22 35 0 0 chr20 19014697 19014726 -53139156 + AT_rich Low_complexity Low_complexity 1 29 0 340 301 82 14 chr20 19014743 19014889 -53138993 + L1MEd LINE L1 4273 4428 -1787 329 324 35 52 chr20 19015884 19016057 -53137825 + MIR3 SINE MIR 5 174 -34 441 0 0 0 chr20 19016145 19016194 -53137688 + (TG)n Simple_repeat Simple_repeat 2 50 0 2857 152 11 11 chr20 19016236 19016404 -53137478 + L1MB3 LINE L1 5657 5824 -359 795 196 0 0 chr20 19016404 19016537 -53137345 + FLAM_A SINE Alu 1 133 0 2857 152 11 11 chr20 19016537 19016894 -53136988 + L1MB3 LINE L1 5823 6182 -1 591 274 110 13 chr20 19017929 19018445 -53135437 - MLT2E LTR ERVL 0 628 7 401 295 6 38 chr20 19018925 19019157 -53134725 + CT-rich Low_complexity Low_complexity 1 224 0 202 56 56 0 chr20 19019316 19019352 -53134530 + CT-rich Low_complexity Low_complexity 1 38 0 575 304 46 36 chr20 19019364 19019667 -53134215 + L2 LINE L2 3008 3313 0 200 97 32 0 chr20 19019667 19019698 -53134184 + (TGAA)n Simple_repeat Simple_repeat 2 33 0 1160 196 128 4 chr20 19020108 19020257 -53133625 - AluJo SINE Alu -3 299 170 215 77 0 26 chr20 19020257 19020296 -53133586 + (TTTTG)n Simple_repeat Simple_repeat 5 42 0 1160 196 128 4 chr20 19020296 19020411 -53133471 - AluJo SINE Alu -132 170 2 21 0 0 0 chr20 19020704 19020725 -53133157 + AT_rich Low_complexity Low_complexity 1 21 0 231 133 0 0 chr20 19020742 19020787 -53133095 + (TG)n Simple_repeat Simple_repeat 2 46 0 22 56 0 0 chr20 19020827 19020863 -53133019 + AT_rich Low_complexity Low_complexity 1 36 0 21 57 0 0 chr20 19021848 19021883 -53131999 + AT_rich Low_complexity Low_complexity 1 35 0 4349 18 0 2 chr20 19022079 19022754 -53131128 - L1PA3 LINE L1 -373 5782 5109 3337 31 0 0 chr20 19022754 19023143 -53130739 + L1PA3 LINE L1 5763 6153 -2 6614 176 109 27 chr20 19023434 19024977 -53128905 + MER52A LTR ERV1 1 1755 0 322 262 38 90 chr20 19025744 19026011 -53127871 - MLT1K LTR MaLR -5 583 331 243 281 73 24 chr20 19026124 19026206 -53127676 - MIR SINE MIR -153 109 24 483 224 83 26 chr20 19026808 19026964 -53126918 + L1ME3 LINE L1 5969 6133 -29 1833 164 38 53 chr20 19027551 19027947 -53125935 - MLT1B LTR MaLR 0 390 1 291 266 13 0 chr20 19028240 19028319 -53125563 + L2 LINE L2 2897 2976 -337 679 116 0 0 chr20 19028399 19028494 -53125388 - AluS SINE Alu -217 95 1 686 208 94 0 chr20 19028746 19028905 -53124977 + MER8 DNA MER2_type 1 174 -65 366 133 13 40 chr20 19028941 19029016 -53124866 - Tigger2a DNA MER2_type -361 73 1 1091 172 235 8 chr20 19030957 19031072 -53122810 + AluJo SINE Alu 2 90 -212 216 0 0 0 chr20 19031072 19031096 -53122786 + (TAAAA)n Simple_repeat Simple_repeat 4 27 0 1091 172 235 8 chr20 19031096 19031218 -53122664 + AluJo SINE Alu 90 293 -9 477 295 76 19 chr20 19032090 19032452 -53121430 - MLT1J2 LTR MaLR 0 450 43 182 367 133 0 chr20 19032541 19032669 -53121213 - L2 LINE L2 -1 3271 3127 25 51 0 0 chr20 19033300 19033339 -53120543 + AT_rich Low_complexity Low_complexity 1 39 0 278 344 99 0 chr20 19034131 19034262 -53119620 + L2 LINE L2 3161 3304 -9 1097 257 41 28 chr20 19034323 19034782 -53119100 + Charlie4a DNA MER1_type 12 476 -32 231 288 9 69 chr20 19034855 19034971 -53118911 + MIR SINE MIR 31 140 -68 184 171 73 0 chr20 19034942 19034983 -53118899 + L3 LINE CR1 1531 1574 -3 * 558 344 0 5 chr20 19036654 19036843 -53117039 + MLT1I LTR MaLR 7 194 -215 242 122 0 41 chr20 19037025 19037074 -53116808 + (TATG)n Simple_repeat Simple_repeat 3 49 0 595 264 190 48 chr20 19038212 19038256 -53115626 - LTR16C LTR ERVL -8 483 447 2040 231 89 8 chr20 19038256 19038772 -53115110 - MER74A LTR ERVL 0 558 1 595 264 190 48 chr20 19038772 19039064 -53114818 - LTR16C LTR ERVL -44 447 99 230 258 21 0 chr20 19039608 19039701 -53114181 + (TA)n Simple_repeat Simple_repeat 2 96 0 462 18 0 0 chr20 19039713 19039768 -53114114 + (TCTA)n Simple_repeat Simple_repeat 1 55 0 249 322 0 23 chr20 19039828 19039915 -53113967 + CT-rich Low_complexity Low_complexity 5 89 0 222 200 0 50 chr20 19040835 19040895 -53112987 + CT-rich Low_complexity Low_complexity 3 59 0 1404 177 23 34 chr20 19041102 19041368 -53112514 + AluJo SINE Alu 39 301 -11 2370 108 0 0 chr20 19041667 19041974 -53111908 + AluSx SINE Alu 1 307 -5 1131 218 100 50 chr20 19042145 19042644 -53111238 - L1MC4 LINE L1 -1 8041 7518 6094 102 12 12 chr20 19042675 19043969 -53109913 + L1PA11 LINE L1 4879 6172 -2 704 235 43 28 chr20 19043987 19044242 -53109640 - LTR37B LTR ERV1 -12 456 198 21 36 0 0 chr20 19045013 19045041 -53108841 + AT_rich Low_complexity Low_complexity 1 28 0 1604 171 0 0 chr20 19045394 19045657 -53108225 - AluJb SINE Alu 0 306 44 2163 115 3 0 chr20 19045664 19045950 -53107932 - AluSg SINE Alu -11 299 13 22 56 0 0 chr20 19046259 19046295 -53107587 + AT_rich Low_complexity Low_complexity 1 36 0 218 308 22 22 chr20 19046344 19046435 -53107447 - MIR SINE MIR -62 200 110 301 250 0 0 chr20 19046607 19046663 -53107219 + L2 LINE L2 3215 3270 -2 212 391 69 25 chr20 19046694 19046896 -53106986 + L2 LINE L2 2658 2868 -446 2574 194 20 14 chr20 19047502 19047543 -53106339 - MLT2B2 LTR ERVL -8 507 468 468 99 0 0 chr20 19047543 19047614 -53106268 + (TAGA)n Simple_repeat Simple_repeat 2 72 0 2574 194 20 14 chr20 19047614 19048071 -53105811 - MLT2B2 LTR ERVL -47 468 6 570 276 81 42 chr20 19048079 19048362 -53105520 + MLT1K LTR MaLR 295 588 0 505 264 66 74 chr20 19049782 19050040 -53103842 + L2 LINE L2 3043 3298 -15 944 226 31 86 chr20 19050919 19051409 -53102473 - LTR37B LTR ERV1 -5 463 1 248 222 123 25 chr20 19051606 19051687 -53102195 - MIR SINE MIR -108 154 66 342 290 0 69 chr20 19052000 19052131 -53101751 + L1MC5 LINE L1 7298 7419 -542 552 217 104 51 chr20 19052300 19052636 -53101246 + L1MC5 LINE L1 7560 7913 -48 2337 109 3 0 chr20 19052727 19053063 -53100819 - AluSq SINE Alu 0 313 1 1990 140 32 24 chr20 19053232 19053604 -53100278 + THE1C LTR MaLR 1 375 0 10522 103 21 35 chr20 19053604 19055206 -53098676 + THE1C-int LTR MaLR 1 1580 0 1950 153 26 34 chr20 19055206 19055584 -53098298 + THE1C LTR MaLR 1 375 0 551 155 0 0 chr20 19055586 19055670 -53098212 + 5S rRNA rRNA 7 90 -31 28 29 0 0 chr20 19056105 19056140 -53097742 + AT_rich Low_complexity Low_complexity 1 35 0 253 263 147 11 chr20 19056428 19056523 -53097359 - L2 LINE L2 -1 3312 3205 296 292 0 0 chr20 19056623 19056695 -53097187 + MIR SINE MIR 181 252 -10 186 293 20 61 chr20 19057915 19058014 -53095868 - MIR SINE MIR -132 130 36 204 220 0 60 chr20 19058623 19058673 -53095209 + polypyrimidine Low_complexity Low_complexity 3 49 0 222 234 0 0 chr20 19058676 19058723 -53095159 - MIR SINE MIR -139 123 77 679 172 185 0 chr20 19058803 19058954 -53094928 + MER5A DNA MER1_type 11 189 0 419 259 75 26 chr20 19059150 19059481 -53094401 + MLT1L LTR MaLR 224 614 -1 2446 76 0 0 chr20 19060031 19060335 -53093547 - AluY SINE Alu -7 304 1 243 306 118 69 chr20 19061017 19061161 -53092721 + L2 LINE L2 2683 2833 -481 199 279 0 0 chr20 19061156 19061199 -53092683 + MER5B DNA MER1_type 7 49 -129 * 214 49 24 24 chr20 19061199 19061240 -53092642 + (TTTG)n Simple_repeat Simple_repeat 4 44 0 209 214 54 107 chr20 19061254 19061366 -53092516 - MER5B DNA MER1_type -45 133 28 447 310 81 101 chr20 19061374 19061819 -53092063 + L2 LINE L2 2836 3271 -1 449 329 83 9 chr20 19062456 19062684 -53091198 - MIR SINE MIR 0 262 18 2904 87 27 40 chr20 19062966 19063416 -53090466 - MLT2A1 LTR ERVL 0 444 1 271 299 80 0 chr20 19064804 19064983 -53088899 - L2 LINE L2 -2 3311 3160 1995 179 20 6 chr20 19065006 19065364 -53088518 + MLT1A1 LTR MaLR 1 363 -2 346 225 0 0 chr20 19065381 19065461 -53088421 - MER69 DNA AcHobo -7 2519 2440 1315 235 134 0 chr20 19065884 19066279 -53087603 - L1MD2 LINE L1 -227 6132 5685 272 246 0 0 chr20 19066301 19066362 -53087520 - MER69 DNA AcHobo -2465 61 1 24 32 0 0 chr20 19066556 19066587 -53087295 + AT_rich Low_complexity Low_complexity 1 31 0 228 229 0 0 chr20 19067635 19067683 -53086199 + (TTCA)n Simple_repeat Simple_repeat 4 51 0 2080 95 7 14 chr20 19067798 19068083 -53085799 - AluSg1 SINE Alu -26 283 1 1420 155 10 51 chr20 19068406 19068749 -53085133 - MER61B LTR ERV1 0 425 1 377 262 77 104 chr20 19068974 19069272 -53084610 - L2 LINE L2 -13 3259 2970 603 332 66 27 chr20 19069579 19069913 -53083969 - L2 LINE L2 -372 2942 2596 828 206 298 63 chr20 19071462 19072103 -53081779 + LTR48 LTR ERV1 1 591 -4 6809 133 24 7 chr20 19072439 19074548 -53079334 + L1MA3 LINE L1 4167 6305 0 3798 172 41 15 chr20 19075654 19076466 -53077416 + L1MA3 LINE L1 5473 6305 0 246 192 0 0 chr20 19076483 19076535 -53077347 + (CATTC)n Simple_repeat Simple_repeat 1 52 0 180 0 0 0 chr20 19077251 19077271 -53076611 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1095 218 66 83 chr20 19077272 19077740 -53076142 + LTR37B LTR ERV1 9 468 0 5592 134 90 11 chr20 19077763 19078109 -53075773 - Tigger3b DNA MER2_type -1800 1228 910 212 0 36 0 chr20 19078109 19078137 -53075745 + (TGAG)n Simple_repeat Simple_repeat 2 30 0 5592 134 90 11 chr20 19078137 19078917 -53074965 - Tigger3b DNA MER2_type -2118 910 14 220 257 14 57 chr20 19079004 19079074 -53074808 + L2 LINE L2 3234 3300 -13 1626 255 53 0 chr20 19080633 19081084 -53072798 + MER110 LTR ERV1 10 484 -7 225 0 0 0 chr20 19081499 19081524 -53072358 + (A)n Simple_repeat Simple_repeat 1 25 0 333 380 12 24 chr20 19081594 19081760 -53072122 + MIR SINE MIR 23 186 -76 422 327 57 1 chr20 19081865 19082033 -53071849 - MIR SINE MIR -62 146 25 588 219 39 0 chr20 19083092 19083220 -53070662 - MER58B DNA MER1_type 0 341 209 450 279 43 17 chr20 19083191 19083480 -53070402 + MLT2E LTR ERVL 273 628 0 * 224 282 175 19 chr20 19083689 19083792 -53070090 + MIR SINE MIR 32 150 -58 813 259 122 31 chr20 19083834 19084155 -53069727 + MLT1I LTR MaLR 60 409 0 21 0 0 0 chr20 19084813 19084834 -53069048 + AT_rich Low_complexity Low_complexity 1 21 0 537 340 194 17 chr20 19085526 19085820 -53068062 - L2 LINE L2 -3 3269 2924 1504 270 38 10 chr20 19086417 19086920 -53066962 - MER119 DNA MER1_type -64 519 3 849 252 22 45 chr20 19087284 19087597 -53066285 + LTR16C LTR ERVL 186 491 0 359 296 93 69 chr20 19087753 19088172 -53065710 - L2 LINE L2 -951 2363 1935 2212 122 0 0 chr20 19088456 19088751 -53065131 + AluSx SINE Alu 1 295 -17 2886 169 85 29 chr20 19089246 19089904 -53063978 - L1MB7 LINE L1 -19 6165 5471 252 100 0 0 chr20 19090154 19090194 -53063688 + (CA)n Simple_repeat Simple_repeat 1 40 0 1892 159 50 0 chr20 19090580 19090900 -53062982 - MER47A DNA MER2_type -2 364 29 1766 216 14 31 chr20 19092151 19092505 -53061377 + MER63 DNA MER1_type 641 988 -73 2441 60 0 35 chr20 19092505 19092820 -53061062 - AluY SINE Alu -7 304 1 1766 216 14 31 chr20 19092820 19092882 -53061000 + MER63 DNA MER1_type 988 1050 -11 204 40 0 0 chr20 19092916 19092941 -53060941 + (TG)n Simple_repeat Simple_repeat 2 26 0 1256 316 43 7 chr20 19093220 19093638 -53060244 + LTR16A LTR ERVL 16 448 -2 906 239 93 30 chr20 19093843 19094144 -53059738 + L1M4 LINE L1 3552 3871 -2275 1137 240 10 38 chr20 19094160 19094473 -53059409 - L1MC4a LINE L1 -295 7513 7210 286 289 247 0 chr20 19095129 19095226 -53058656 + L2 LINE L2 3189 3309 -4 251 283 11 22 chr20 19095238 19095330 -53058552 - MIR SINE MIR -35 227 137 303 190 0 0 chr20 19095367 19095425 -53058457 - L1MC5 LINE L1 -48 7913 7856 1490 217 11 27 chr20 19095430 19095803 -53058079 - MLT1A2 LTR MaLR -4 370 4 807 169 76 47 chr20 19095860 19096032 -53057850 - FRAM SINE Alu 0 176 1 22 0 0 0 chr20 19097147 19097169 -53056713 + AT_rich Low_complexity Low_complexity 1 22 0 411 261 9 0 chr20 19098335 19098446 -53055436 - MER20B DNA MER1_type -5 778 667 1028 277 67 26 chr20 19098534 19098920 -53054962 + LTR16C LTR ERVL 90 491 0 1460 257 141 8 chr20 19098920 19099515 -53054367 - MER20B DNA MER1_type -109 674 1 317 248 179 0 chr20 19099852 19099969 -53053913 + MIR SINE MIR 125 262 0 2759 22 0 3 chr20 19102122 19102434 -53051448 + AluY SINE Alu 1 311 0 303 49 0 0 chr20 19102443 19102484 -53051398 + (TA)n Simple_repeat Simple_repeat 2 42 0 253 270 40 14 chr20 19103965 19104039 -53049843 - MIR SINE MIR -123 139 64 261 180 0 0 chr20 19104355 19104405 -53049477 + GA-rich Low_complexity Low_complexity 3 52 0 2259 108 0 7 chr20 19107667 19107973 -53045909 + AluSc SINE Alu 2 305 -4 234 0 0 0 chr20 19108604 19108630 -53045252 + (A)n Simple_repeat Simple_repeat 1 26 0 338 227 27 18 chr20 19108652 19108762 -53045120 + MER103 DNA DNA 54 164 -2 245 98 24 0 chr20 19109060 19109101 -53044781 + (GGGA)n Simple_repeat Simple_repeat 3 44 0 258 294 42 56 chr20 19109534 19109677 -53044205 + MIR3 SINE MIR 38 178 -30 384 298 75 25 chr20 19110178 19110339 -53043543 + MIR3 SINE MIR 17 185 -23 1024 280 94 57 chr20 19110450 19111077 -53042805 + L1MC4a LINE L1 5523 5657 -497 23 33 0 0 chr20 19111292 19111322 -53042560 + AT_rich Low_complexity Low_complexity 1 30 0 2126 120 0 47 chr20 19111474 19111791 -53042091 - AluSx SINE Alu -10 302 1 351 245 86 58 chr20 19112013 19112152 -53041730 + MARNA DNA Mariner 441 583 -3 986 264 70 51 chr20 19112171 19112691 -53041191 - MLT1G LTR MaLR -6 549 10 213 208 0 21 chr20 19115548 19115596 -53038286 - L2 LINE L2 -2 3311 3265 241 277 24 24 chr20 19115876 19115959 -53037923 + L3 LINE CR1 1375 1457 -120 24 0 0 85 chr20 19117007 19117054 -53036828 + AT_rich Low_complexity Low_complexity 1 43 0 2216 63 0 4 chr20 19117396 19117664 -53036218 - AluY SINE Alu -18 293 27 350 269 161 20 chr20 19119003 19119152 -53034730 + MIR SINE MIR 70 239 -23 229 284 11 11 chr20 19119539 19119627 -53034255 - L2 LINE L2 -141 3172 3085 22 0 0 0 chr20 19119907 19119929 -53033953 + AT_rich Low_complexity Low_complexity 1 22 0 1744 86 8 0 chr20 19120105 19120362 -53033520 - L1MA2 LINE L1 0 6304 6046 375 287 36 101 chr20 19120386 19120773 -53033109 - HAL1 LINE L1 -1183 1324 963 21 71 0 0 chr20 19120859 19120901 -53032981 + AT_rich Low_complexity Low_complexity 1 42 0 405 0 0 0 chr20 19121156 19121201 -53032681 + (CA)n Simple_repeat Simple_repeat 2 46 0 695 136 0 0 chr20 19121900 19122031 -53031851 - FLAM_C SINE Alu 0 148 18 601 229 0 7 chr20 19122413 19122553 -53031329 + FLAM_C SINE Alu 5 143 0 724 200 5 93 chr20 19123453 19123658 -53030224 - MER5A DNA MER1_type 0 189 3 21 0 0 0 chr20 19124103 19124124 -53029758 + AT_rich Low_complexity Low_complexity 1 21 0 1896 154 46 0 chr20 19124296 19124641 -53029241 + L1MB7 LINE L1 5353 5713 -471 2348 162 19 19 chr20 19124642 19125062 -53028820 - MSTB LTR MaLR -6 420 1 2175 180 24 7 chr20 19125062 19125485 -53028397 + L1MB7 LINE L1 5704 6133 -51 2048 143 138 5 chr20 19125486 19125864 -53028018 - MSTA LTR MaLR 0 428 1 201 154 0 0 chr20 19125884 19125923 -53027959 + A-rich Low_complexity Low_complexity 1 39 0 233 179 0 0 chr20 19126943 19126982 -53026900 - MIR SINE MIR -15 247 209 5358 219 84 58 chr20 19127050 19127305 -53026577 + L1MDa LINE L1 9 256 -6284 297 0 0 0 chr20 19127305 19127338 -53026544 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 261 0 0 0 chr20 19127337 19127366 -53026516 + (CCA)n Simple_repeat Simple_repeat 3 31 0 * 5358 219 84 58 chr20 19127338 19128713 -53025169 + L1MDa LINE L1 256 1793 -4747 2195 115 0 3 chr20 19128713 19129017 -53024865 + AluSg SINE Alu 1 303 -7 5358 219 84 58 chr20 19129017 19129324 -53024558 + L1MDa LINE L1 1793 2091 -4449 871 192 107 122 chr20 19129322 19129418 -53024464 + L1ME2 LINE L1 5758 5854 -310 * 2869 13 0 0 chr20 19129418 19129732 -53024150 + AluYb8 SINE Alu 1 314 -4 871 192 107 122 chr20 19129732 19130046 -53023836 + L1ME2 LINE L1 5854 6162 -2 452 270 17 0 chr20 19130523 19130638 -53023244 + MLT1G1 LTR MaLR 1 117 -478 217 226 19 38 chr20 19131233 19131286 -53022596 + MIR SINE MIR 44 95 -167 484 277 122 64 chr20 19133406 19133702 -53020180 + MLT1J LTR MaLR 1 313 -198 1878 279 24 2 chr20 19134516 19134985 -53018897 + Zaphod DNA AcHobo 119 597 -3434 478 196 11 0 chr20 19134996 19135088 -53018794 + MER115 DNA AcHobo 593 685 -8 213 192 0 50 chr20 19135165 19135228 -53018654 - MIR SINE MIR -63 145 106 560 285 25 13 chr20 19135361 19135519 -53018363 + MER5A DNA MER1_type 9 168 -21 458 195 213 6 chr20 19135548 19135693 -53018189 + MER5A DNA MER1_type 4 183 -6 522 290 51 23 chr20 19136869 19137045 -53016837 - MIR SINE MIR 0 262 82 1589 178 56 7 chr20 19137079 19137365 -53016517 - AluJb SINE Alu -12 300 1 440 302 103 30 chr20 19137612 19138039 -53015843 + L1ME4a LINE L1 5590 6047 -74 327 113 0 65 chr20 19138142 19138204 -53015678 + Alu SINE Alu 1 51 -248 204 214 0 0 chr20 19138518 19138560 -53015322 + (TCCA)n Simple_repeat Simple_repeat 4 45 0 25 51 0 0 chr20 19139291 19139330 -53014552 + AT_rich Low_complexity Low_complexity 1 39 0 799 158 0 8 chr20 19139745 19139878 -53014004 - FLAM_A SINE Alu -1 132 1 515 87 0 0 chr20 19140169 19140238 -53013644 - THE1C LTR MaLR -304 71 3 193 282 87 48 chr20 19140284 19140387 -53013495 + MIR SINE MIR 16 122 -86 551 325 123 20 chr20 19140623 19140915 -53012967 - L3 LINE CR1 -17 1560 1239 442 242 60 71 chr20 19141441 19141539 -53012343 + Charlie8 DNA MER1_type 15 112 -229 2309 92 0 10 chr20 19141539 19141845 -53012037 + AluSq SINE Alu 1 303 -10 442 242 60 71 chr20 19141845 19141928 -53011954 + Charlie8 DNA MER1_type 112 194 -147 229 205 61 0 chr20 19142568 19142634 -53011248 + L1MC/D LINE L1 5384 5456 -727 2467 122 8 3 chr20 19142667 19143029 -53010853 + THE1B LTR MaLR 1 364 0 674 206 161 62 chr20 19143179 19143299 -53010583 + L1MC5 LINE L1 7084 7191 -770 345 47 0 0 chr20 19143299 19143342 -53010540 + (CA)n Simple_repeat Simple_repeat 1 43 0 674 206 161 62 chr20 19143342 19143434 -53010448 + L1MC5 LINE L1 7191 7272 -689 2847 124 28 2 chr20 19143434 19143871 -53010011 + MER83 LTR ERV1 1 448 0 674 206 161 62 chr20 19143871 19144060 -53009822 + L1MC5 LINE L1 7272 7526 -435 21 0 0 0 chr20 19145584 19145605 -53008277 + AT_rich Low_complexity Low_complexity 1 21 0 401 305 70 32 chr20 19145790 19145977 -53007905 + MIR SINE MIR 16 209 -53 677 314 57 13 chr20 19146469 19146698 -53007184 - MIR SINE MIR -3 259 21 342 288 144 45 chr20 19147721 19147943 -53005939 - L3 LINE CR1 -431 1146 903 667 222 48 0 chr20 19147990 19148157 -53005725 - MER5B DNA MER1_type -3 175 1 518 218 241 0 chr20 19148172 19148305 -53005577 + MER5A DNA MER1_type 10 174 -15 673 180 23 8 chr20 19149304 19149432 -53004450 - FLAM_C SINE Alu 0 133 4 617 243 183 70 chr20 19150051 19150065 -53003817 - L1MC4a LINE L1 -1842 5966 5955 255 61 0 0 chr20 19150065 19150098 -53003784 + (CA)n Simple_repeat Simple_repeat 2 34 0 617 243 183 70 chr20 19150098 19150499 -53003383 - L1MC4a LINE L1 -1853 5955 5504 247 246 0 7 chr20 19150532 19150611 -53003271 - L1MC4a LINE L1 -741 5423 5347 287 298 265 7 chr20 19150611 19150762 -53003120 + MIR SINE MIR 73 262 0 185 346 156 17 chr20 19151221 19151568 -53002314 + L2 LINE L2 2563 2957 -357 22 0 0 0 chr20 19151854 19151876 -53002006 + AT_rich Low_complexity Low_complexity 1 22 0 621 301 55 34 chr20 19151982 19152180 -53001702 + MER102b DNA MER1_type 5 214 -1214 2558 173 24 18 chr20 19152180 19152690 -53001192 + LTR10D LTR ERV1 1 513 0 621 301 55 34 chr20 19152690 19152817 -53001065 + MER102b DNA MER1_type 214 337 -4 215 222 48 0 chr20 19152821 19152884 -53000998 + MIR SINE MIR 72 137 -71 423 300 0 40 chr20 19153578 19153801 -53000081 - L1MC4a LINE L1 -1869 5939 5726 568 267 140 36 chr20 19154048 19154269 -52999613 - MIR SINE MIR -2 260 17 1203 169 106 33 chr20 19154508 19154872 -52999010 - MSTB LTR MaLR -2 428 1 2602 203 25 102 chr20 19155052 19155997 -52997885 - L1MC4 LINE L1 0 8042 7170 430 349 165 34 chr20 19157296 19157648 -52996234 - L2 LINE L2 -5 3267 2870 473 325 53 22 chr20 19157674 19157902 -52995980 + MIR SINE MIR 2 236 -26 26 0 0 0 chr20 19157903 19157929 -52995953 + AT_rich Low_complexity Low_complexity 1 26 0 196 68 23 45 chr20 19158968 19159012 -52994870 + (CAAAAA)n Simple_repeat Simple_repeat 1 43 0 3514 139 7 0 chr20 19159100 19159654 -52994228 + L1PA16 LINE L1 5606 6163 -3 235 194 16 32 chr20 19159874 19159936 -52993946 + L1MC4a LINE L1 5629 5689 -2119 * 619 171 93 102 chr20 19159918 19160251 -52993631 + L1MC5 LINE L1 7586 7915 -46 317 288 25 75 chr20 19160265 19160425 -52993457 + L1MC4a LINE L1 5880 6031 -1777 219 186 0 0 chr20 19160523 19160566 -52993316 + (TATATG)n Simple_repeat Simple_repeat 6 48 0 273 298 11 0 chr20 19160655 19160749 -52993133 + (TATG)n Simple_repeat Simple_repeat 1 95 0 2528 59 0 3 chr20 19160928 19161232 -52992650 + AluY SINE Alu 1 303 -8 23 54 0 0 chr20 19161551 19161588 -52992294 + AT_rich Low_complexity Low_complexity 1 37 0 434 312 19 0 chr20 19161828 19161982 -52991900 + L1MB5 LINE L1 2 158 -6384 769 204 0 0 chr20 19162015 19162147 -52991735 + AluJo SINE Alu 4 135 -177 844 289 57 41 chr20 19162302 19162721 -52991161 + L1MB5 LINE L1 359 784 -5758 6686 217 38 82 chr20 19162729 19165124 -52988758 + L1MB5 LINE L1 1349 3581 -3063 1021 247 167 46 chr20 19165124 19165160 -52988722 - MLT2B1 LTR ERVL -1 519 489 539 73 0 12 chr20 19165160 19165242 -52988640 + (TCTA)n Simple_repeat Simple_repeat 2 82 0 1021 247 167 46 chr20 19165242 19165666 -52988216 - MLT2B1 LTR ERVL -31 489 3 6686 217 38 82 chr20 19165666 19167148 -52986734 + L1MB5 LINE L1 3581 5126 -1518 2891 176 69 38 chr20 19167156 19167652 -52986230 + L1MB5 LINE L1 5951 6477 -195 2029 100 21 0 chr20 19167652 19167931 -52985951 + AluSx SINE Alu 23 307 -5 2891 176 69 38 chr20 19167931 19168127 -52985755 + L1MB5 LINE L1 6477 6665 -7 551 279 79 16 chr20 19168470 19168660 -52985222 - MLT1J2 LTR MaLR -225 225 24 2248 109 0 3 chr20 19169491 19169794 -52984088 - AluSc SINE Alu -7 302 1 203 321 113 28 chr20 19170634 19170740 -52983142 + MIR SINE MIR 33 147 -61 23 0 0 0 chr20 19174139 19174162 -52979720 + AT_rich Low_complexity Low_complexity 1 23 0 996 269 58 52 chr20 19174640 19175057 -52978825 - MER39 LTR ERV1 0 707 73 2532 98 45 3 chr20 19175057 19175415 -52978467 - THE1C LTR MaLR -2 373 1 996 269 58 52 chr20 19175415 19175489 -52978393 - MER39 LTR ERV1 -634 73 1 767 273 92 51 chr20 19175558 19176184 -52977698 - L2 LINE L2 -5 3308 2659 488 245 97 97 chr20 19176447 19176786 -52977096 + L1ME4a LINE L1 5571 5909 -212 735 167 0 38 chr20 19177159 19177291 -52976591 + FLAM_C SINE Alu 1 127 -16 322 194 0 45 chr20 19177449 19177516 -52976366 + MER5A DNA MER1_type 53 116 -73 960 212 129 62 chr20 19177528 19177980 -52975902 + MER39 LTR ERV1 5 707 0 255 169 0 34 chr20 19177982 19178041 -52975841 + MER5A DNA MER1_type 133 189 0 21 71 0 0 chr20 19179218 19179260 -52974622 + AT_rich Low_complexity Low_complexity 1 42 0 181 169 34 34 chr20 19179475 19179534 -52974348 + (CATA)n Simple_repeat Simple_repeat 2 60 0 761 257 22 6 chr20 19180817 19181000 -52972882 + MER5A DNA MER1_type 1 186 -3 552 276 29 11 chr20 19181261 19181435 -52972447 + MIR SINE MIR 25 201 -61 294 289 105 0 chr20 19182100 19182214 -52971668 + MIR SINE MIR 6 131 -131 222 91 0 0 chr20 19183446 19183479 -52970403 + (CA)n Simple_repeat Simple_repeat 2 34 0 272 121 182 15 chr20 19184889 19184955 -52968927 - MER95 LTR ERV -2 429 353 1078 142 41 23 chr20 19185187 19185406 -52968476 - L1MA8 LINE L1 -6 6285 6063 1395 222 36 17 chr20 19185409 19185770 -52968112 - MER95 LTR ERV -59 372 5 778 252 49 24 chr20 19186245 19186491 -52967391 - MIR SINE MIR -4 258 7 200 143 24 0 chr20 19186859 19186901 -52966981 + (TAGA)n Simple_repeat Simple_repeat 4 46 0 2427 91 0 0 chr20 19187781 19188139 -52965743 - AluSg1 SINE Alu 0 358 1 696 101 0 0 chr20 19188566 19188655 -52965227 - FLAM SINE Alu -17 126 38 34 42 0 0 chr20 19189026 19189074 -52964808 + AT_rich Low_complexity Low_complexity 1 48 0 1624 201 0 10 chr20 19189478 19189766 -52964116 + AluJo SINE Alu 7 291 -21 223 280 150 30 chr20 19191263 19191363 -52962519 - MIR SINE MIR -72 136 25 1460 208 40 30 chr20 19192577 19192947 -52960935 - MLT1A2 LTR MaLR 0 374 1 327 283 10 10 chr20 19192973 19193072 -52960810 - L2 LINE L2 -1 3312 3214 950 200 24 29 chr20 19193251 19193461 -52960421 + MER3 DNA MER1_type 1 209 0 23 0 0 0 chr20 19193805 19193828 -52960054 + AT_rich Low_complexity Low_complexity 1 23 0 554 209 0 35 chr20 19193828 19193943 -52959939 - FRAM SINE Alu -54 122 12 356 272 134 69 chr20 19195277 19195365 -52958517 + L2 LINE L2 3052 3133 -180 276 100 0 0 chr20 19195365 19195405 -52958477 + (TATAA)n Simple_repeat Simple_repeat 1 40 0 356 272 134 69 chr20 19195405 19195562 -52958320 + L2 LINE L2 3133 3313 0 673 285 45 77 chr20 19195678 19196120 -52957762 + MLT1J2 LTR MaLR 1 428 -22 2654 93 0 29 chr20 19196216 19196591 -52957291 - THE1B LTR MaLR 0 364 1 2153 112 0 3 chr20 19197178 19197473 -52956409 + AluSg SINE Alu 1 294 -16 198 0 0 0 chr20 19198637 19198659 -52955223 + (CAAAAA)n Simple_repeat Simple_repeat 3 24 0 325 335 68 11 chr20 19198957 19199133 -52954749 + MIR SINE MIR 8 193 -69 782 287 50 4 chr20 19199135 19199393 -52954489 + MER77 LTR ERV1 329 598 -7 399 300 82 45 chr20 19200243 19200354 -52953528 + L1ME4a LINE L1 5411 5516 -605 9190 25 5 0 chr20 19200354 19202206 -52951676 + L1PA4 LINE L1 4289 6144 -11 399 300 82 45 chr20 19202206 19202581 -52951301 + L1ME4a LINE L1 5516 5915 -206 427 263 73 7 chr20 19202624 19202761 -52951121 - MIR SINE MIR -40 222 77 1828 252 75 68 chr20 19202796 19203526 -52950356 - MER21B LTR ERV1 -128 735 1 808 262 31 26 chr20 19203827 19204056 -52949826 + MIR SINE MIR 23 252 -10 1908 159 7 3 chr20 19204204 19204493 -52949389 + AluSx SINE Alu 1 290 -22 2535 58 0 6 chr20 19205499 19205811 -52948071 - AluY SINE Alu -1 310 1 1670 175 79 23 chr20 19206325 19206679 -52947203 - MLT1A2 LTR MaLR 0 374 1 220 149 64 0 chr20 19206832 19206879 -52947003 + (TTTAA)n Simple_repeat Simple_repeat 3 52 0 38 39 0 0 chr20 19207217 19207269 -52946613 + AT_rich Low_complexity Low_complexity 1 52 0 2267 228 114 11 chr20 19207428 19208121 -52945761 - L1MD2 LINE L1 0 6359 5604 4307 238 61 22 chr20 19208297 19209704 -52944178 - L1MD2 LINE L1 -613 5629 4130 2169 99 61 0 chr20 19209704 19209997 -52943885 - AluSx SINE Alu -1 311 1 4307 238 61 22 chr20 19209997 19210297 -52943585 - L1MD2 LINE L1 -2112 4130 3843 25 0 0 0 chr20 19210552 19210577 -52943305 + AT_rich Low_complexity Low_complexity 1 25 0 315 169 46 15 chr20 19210607 19210672 -52943210 + GA-rich Low_complexity Low_complexity 2 68 0 435 119 0 0 chr20 19210672 19210739 -52943143 + (GGAA)n Simple_repeat Simple_repeat 3 69 0 22 0 0 0 chr20 19211717 19211739 -52942143 + AT_rich Low_complexity Low_complexity 1 22 0 2159 100 14 3 chr20 19213086 19213377 -52940505 + AluSg SINE Alu 1 294 -16 22 0 0 0 chr20 19213798 19213820 -52940062 + AT_rich Low_complexity Low_complexity 1 22 0 1510 161 33 50 chr20 19214255 19214554 -52939328 - AluJo SINE Alu -18 294 1 2358 88 0 0 chr20 19214733 19215028 -52938854 - AluSg SINE Alu -15 295 1 23 54 0 0 chr20 19215583 19215620 -52938262 + AT_rich Low_complexity Low_complexity 1 37 0 695 199 25 19 chr20 19215845 19216006 -52937876 + MER5A DNA MER1_type 1 162 -27 2219 106 0 3 chr20 19216164 19216465 -52937417 - AluSx SINE Alu -12 300 1 21 0 0 0 chr20 19218573 19218594 -52935288 + AT_rich Low_complexity Low_complexity 1 21 0 563 291 74 34 chr20 19219927 19220305 -52933577 - L1ME LINE L1 -512 5719 5327 21 36 0 0 chr20 19220377 19220405 -52933477 + AT_rich Low_complexity Low_complexity 1 28 0 1471 204 17 27 chr20 19220472 19220766 -52933116 + AluJo SINE Alu 1 291 -21 333 287 73 54 chr20 19220912 19221099 -52932783 - L1ME LINE L1 -1315 4900 4703 1680 199 7 0 chr20 19221099 19221405 -52932477 - AluJo SINE Alu -4 308 1 333 287 73 54 chr20 19221405 19221534 -52932348 - L1ME LINE L1 -1512 4703 4578 220 222 16 16 chr20 19221643 19221706 -52932176 + (TTTG)n Simple_repeat Simple_repeat 2 64 0 269 241 138 0 chr20 19221713 19221800 -52932082 - L1ME LINE L1 -5045 1351 1253 279 239 23 11 chr20 19221854 19221942 -52931940 + (TA)n Simple_repeat Simple_repeat 1 89 0 216 235 0 0 chr20 19221969 19222037 -52931845 + (TA)n Simple_repeat Simple_repeat 1 68 0 348 303 5 128 chr20 19223392 19223603 -52930279 - MIR SINE MIR -18 244 60 477 346 78 6 chr20 19224371 19224558 -52929324 - MIR3 SINE MIR -2 206 4 2452 85 0 0 chr20 19224586 19224892 -52928990 - AluY SINE Alu -5 306 1 211 229 0 21 chr20 19225035 19225083 -52928799 + A-rich Low_complexity Low_complexity 3 49 0 2200 70 3 0 chr20 19225568 19225855 -52928027 + L1PA7 LINE L1 5866 6153 -1 198 167 0 0 chr20 19225986 19226022 -52927860 + GA-rich Low_complexity Low_complexity 3 38 0 348 209 0 0 chr20 19227021 19227088 -52926794 + MER116 DNA Mariner 14 80 0 972 318 46 44 chr20 19227088 19227655 -52926227 + L2 LINE L2 2282 2849 -465 499 289 71 40 chr20 19227721 19227946 -52925936 + L2 LINE L2 2942 3173 -140 2907 219 68 12 chr20 19228158 19228956 -52924926 - MER63C DNA MER1_type -88 842 1 1508 134 142 19 chr20 19229121 19229389 -52924493 + AluJb SINE Alu 1 301 -1 217 250 0 19 chr20 19230176 19230228 -52923654 + L2 LINE L2 3221 3271 -1 1294 139 0 29 chr20 19231973 19232181 -52921701 - AluSg/x SINE Alu -25 285 84 265 291 0 0 chr20 19232306 19232361 -52921521 - L2 LINE L2 -11 3261 3207 28 29 0 0 chr20 19232425 19232460 -52921422 + AT_rich Low_complexity Low_complexity 1 35 0 415 295 9 0 chr20 19234046 19234151 -52919731 - MIR3 SINE MIR -16 192 87 474 299 26 20 chr20 19235025 19235280 -52918602 + CT-rich Low_complexity Low_complexity 1 256 0 1583 144 11 49 chr20 19235441 19235726 -52918156 - AluJo SINE Alu -11 301 28 180 111 0 0 chr20 19235943 19235970 -52917912 + (GGGA)n Simple_repeat Simple_repeat 2 28 0 707 211 39 6 chr20 19236154 19236334 -52917548 - MER53 DNA DNA -3 186 1 333 295 129 42 chr20 19236394 19236845 -52917037 - L2 LINE L2 -1022 2292 1803 447 90 75 0 chr20 19236881 19236948 -52916934 + MER53 DNA DNA 1 72 -117 243 213 0 49 chr20 19237038 19237099 -52916783 + GA-rich Low_complexity Low_complexity 1 58 0 822 257 115 7 chr20 19237146 19237442 -52916440 - MER46C DNA MER2_type -1 337 10 642 277 69 50 chr20 19237945 19238248 -52915634 + L2 LINE L2 2996 3304 -9 21 0 0 0 chr20 19240110 19240131 -52913751 + AT_rich Low_complexity Low_complexity 1 21 0 461 316 30 6 chr20 19240361 19240529 -52913353 + CT-rich Low_complexity Low_complexity 2 173 0 253 357 25 19 chr20 19241009 19241166 -52912716 + L2 LINE L2 2334 2491 -823 29 94 0 0 chr20 19243070 19243155 -52910727 + AT_rich Low_complexity Low_complexity 1 85 0 1023 162 5 46 chr20 19243157 19243354 -52910528 - MER58A DNA MER1_type 0 224 36 224 154 77 77 chr20 19243459 19243524 -52910358 + L3 LINE CR1 412 476 -1101 591 294 43 19 chr20 19243923 19244134 -52909748 - MIR SINE MIR -4 258 43 232 349 35 0 chr20 19244199 19244285 -52909597 - MIR3 SINE MIR -10 198 110 1887 139 13 25 chr20 19244983 19245299 -52908583 - AluJb SINE Alu 0 312 1 344 330 52 0 chr20 19245984 19246099 -52907783 - MIR SINE MIR -108 154 34 261 327 49 37 chr20 19246314 19246476 -52907406 - MLT1J LTR MaLR -94 417 254 255 61 0 0 chr20 19246504 19246537 -52907345 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 767 214 21 7 chr20 19246540 19246685 -52907197 - FRAM SINE Alu -30 146 1 180 269 125 39 chr20 19248016 19248120 -52905762 + L2 LINE L2 3000 3112 -160 2560 40 0 3 chr20 19248742 19249040 -52904842 - AluY SINE Alu -14 297 1 663 279 113 0 chr20 19249185 19249414 -52904468 + MIR SINE MIR 6 260 -2 25 0 0 0 chr20 19250114 19250139 -52903743 + AT_rich Low_complexity Low_complexity 1 25 0 2188 104 0 4 chr20 19250644 19250965 -52902917 - AluSq SINE Alu 0 325 6 294 125 0 0 chr20 19251112 19251160 -52902722 + (GGA)n Simple_repeat Simple_repeat 2 49 0 402 276 125 52 chr20 19251183 19251607 -52902275 + MLT1J LTR MaLR 5 459 -52 2155 151 49 36 chr20 19252577 19253022 -52900860 + L1MB7 LINE L1 5718 6168 -16 209 319 18 157 chr20 19253296 19253685 -52900197 + L2 LINE L2 2917 3251 -21 185 270 9 113 chr20 19253843 19253958 -52899924 - MIR SINE MIR -71 191 89 551 270 170 4 chr20 19254968 19255209 -52898673 + LTR16C LTR ERVL 209 489 -2 839 216 110 26 chr20 19255273 19255500 -52898382 + MIR SINE MIR 2 247 -15 616 256 0 15 chr20 19255516 19255653 -52898229 - MIR3 SINE MIR -6 202 68 530 248 89 9 chr20 19257258 19257472 -52896410 - LTR16C LTR ERVL -12 479 249 180 0 0 0 chr20 19258356 19258376 -52895506 + (CA)n Simple_repeat Simple_repeat 1 20 0 279 0 0 0 chr20 19258852 19258883 -52894999 + (CA)n Simple_repeat Simple_repeat 2 32 0 209 311 33 0 chr20 19261449 19261510 -52892372 + MER5A DNA MER1_type 69 131 -58 471 325 147 0 chr20 19261959 19262116 -52891766 + MER5A DNA MER1_type 9 188 -1 383 219 73 0 chr20 19262510 19262606 -52891276 + MER5A DNA MER1_type 4 106 -83 275 365 20 20 chr20 19262671 19262819 -52891063 + L3 LINE CR1 1414 1561 -16 212 188 16 0 chr20 19263427 19263491 -52890391 + (TCCA)n Simple_repeat Simple_repeat 4 68 0 2368 48 7 3 chr20 19264325 19264619 -52889263 + AluY SINE Alu 1 295 -16 1832 169 3 28 chr20 19265011 19265331 -52888551 + AluJo SINE Alu 1 312 0 716 152 179 7 chr20 19265349 19265500 -52888382 + MER5A DNA MER1_type 12 188 -1 220 306 19 37 chr20 19265729 19265837 -52888045 + MIR3 SINE MIR 13 118 -90 413 291 134 36 chr20 19266721 19267078 -52886804 - LTR16C LTR ERVL 0 491 100 1280 238 17 17 chr20 19268507 19268797 -52885085 + AluJo SINE Alu 2 291 -21 1900 178 0 3 chr20 19268802 19269105 -52884777 + AluJo SINE Alu 5 306 -6 362 278 32 16 chr20 19269119 19269306 -52884576 + L1MC4a LINE L1 5708 5897 -1911 1087 264 137 40 chr20 19269388 19269942 -52883940 - L2 LINE L2 0 3313 2698 307 287 81 52 chr20 19270177 19270351 -52883531 + MIR SINE MIR 84 262 0 242 307 102 31 chr20 19270466 19270593 -52883289 - MIR3 SINE MIR -3 205 70 368 178 158 0 chr20 19270676 19270777 -52883105 + MER113 DNA MER1_type? 78 194 -327 1694 147 37 37 chr20 19271144 19271497 -52882385 - MLT1A1 LTR MaLR 0 365 13 244 260 14 0 chr20 19271508 19271523 -52882359 - MLT1H LTR MaLR -447 102 89 1575 174 19 40 chr20 19271523 19271896 -52881986 - MLT1A1 LTR MaLR 0 365 1 244 260 14 0 chr20 19271896 19271953 -52881929 - MLT1H LTR MaLR -460 89 29 1805 184 0 7 chr20 19272138 19272448 -52881434 + AluJo SINE Alu 1 308 -4 1963 228 66 30 chr20 19272459 19273169 -52880713 + HsTC2a DNA MER2_type 5 740 -4 1502 6 0 0 chr20 19273764 19273922 -52879960 + SVA Other Other 1227 1384 -2 1667 148 0 8 chr20 19274042 19274306 -52879576 - AluJb SINE Alu -8 304 43 264 143 0 0 chr20 19274684 19274740 -52879142 + (TC)n Simple_repeat Simple_repeat 2 57 0 1303 271 23 0 chr20 19275170 19275517 -52878365 - LTR16A LTR ERVL -15 435 81 1173 190 38 0 chr20 19275541 19275752 -52878130 + MER20 DNA MER1_type 1 219 0 3078 149 22 9 chr20 19276036 19276571 -52877311 + MER34 LTR ERV1 1 542 0 183 194 0 0 chr20 19277051 19277082 -52876800 - L2 LINE L2 -26 3287 3257 3234 128 43 59 chr20 19277484 19278115 -52875767 - L1PB4 LINE L1 -2 6154 5534 1025 196 65 14 chr20 19278356 19278632 -52875250 + MER63 DNA MER1_type 1 290 -640 1191 202 73 3 chr20 19278633 19278920 -52874962 + MER63 DNA MER1_type 733 1039 -21 5887 154 28 9 chr20 19280657 19282881 -52871001 + L1PB2 LINE L1 3890 6149 -2 691 261 19 48 chr20 19283090 19283368 -52870514 - L1M2 LINE L1 -532 5632 5378 2070 137 25 27 chr20 19283879 19284244 -52869638 - THE1B LTR MaLR 0 364 1 3330 113 8 2 chr20 19285209 19285704 -52868178 - L1PA14 LINE L1 -9 6152 5655 1111 127 42 0 chr20 19285705 19285870 -52868012 + AluSq SINE Alu 127 298 -15 2707 80 3 0 chr20 19285870 19286258 -52867624 - L1PA14 LINE L1 -494 5667 5279 229 295 53 21 chr20 19286433 19286528 -52867354 + L2 LINE L2 3169 3266 -6 250 226 0 0 chr20 19289250 19289312 -52864570 + L1PB4 LINE L1 6091 6152 -4 22 56 0 0 chr20 19289312 19289348 -52864534 + AT_rich Low_complexity Low_complexity 1 36 0 263 218 122 54 chr20 19289995 19290142 -52863740 - MLT1J1 LTR MaLR -2 444 288 364 275 55 0 chr20 19290262 19290422 -52863460 - MLT1J2 LTR MaLR -294 156 21 274 293 37 0 chr20 19291378 19291460 -52862422 + L2 LINE L2 3228 3312 -1 1334 227 105 0 chr20 19291697 19292050 -52861832 - L1MB8 LINE L1 -83 6095 5706 514 295 78 16 chr20 19292342 19292535 -52861347 + MIR SINE MIR 5 209 -53 284 284 39 29 chr20 19292560 19292662 -52861220 + MIR SINE MIR 150 252 -10 330 239 33 11 chr20 19292699 19292791 -52861091 + L2 LINE L2 3176 3269 -44 446 338 0 14 chr20 19293408 19293556 -52860326 - MIR3 SINE MIR -6 202 57 396 40 0 0 chr20 19294748 19294798 -52859084 + (TG)n Simple_repeat Simple_repeat 2 51 0 375 280 0 11 chr20 19296201 19296294 -52857588 + L2 LINE L2 3181 3272 0 2199 131 0 6 chr20 19297413 19297726 -52856156 + AluSx SINE Alu 1 311 -1 235 253 72 0 chr20 19297763 19297846 -52856036 - L1MC4 LINE L1 -1340 6702 6614 203 241 17 0 chr20 19298237 19298295 -52855587 + (TG)n Simple_repeat Simple_repeat 2 60 0 237 33 0 0 chr20 19299116 19299146 -52854736 + (A)n Simple_repeat Simple_repeat 1 30 0 317 274 170 15 chr20 19301273 19301408 -52852474 - MIR SINE MIR -76 186 31 432 0 0 0 chr20 19302109 19302157 -52851725 + (CA)n Simple_repeat Simple_repeat 2 49 0 207 298 73 46 chr20 19303879 19304030 -52849852 + L2 LINE L2 2826 2980 -333 632 242 22 44 chr20 19304393 19304575 -52849307 - MER5B DNA MER1_type 0 178 1 237 132 0 0 chr20 19304740 19304778 -52849104 + (T)n Simple_repeat Simple_repeat 1 38 0 220 299 23 23 chr20 19305547 19305634 -52848248 + MIR SINE MIR 90 176 -86 192 77 0 0 chr20 19305652 19305678 -52848204 + (A)n Simple_repeat Simple_repeat 1 26 0 186 71 0 0 chr20 19306314 19306342 -52847540 + (T)n Simple_repeat Simple_repeat 1 28 0 350 269 103 139 chr20 19307548 19307916 -52845966 + MLT1K LTR MaLR 62 416 -172 1268 236 210 14 chr20 19307958 19308454 -52845428 + LTR50 LTR ERVL 203 795 0 270 0 0 0 chr20 19308680 19308710 -52845172 + (TA)n Simple_repeat Simple_repeat 2 31 0 820 187 0 55 chr20 19308710 19308892 -52844990 - AluJo SINE Alu -22 290 119 21 0 0 0 chr20 19308935 19308956 -52844926 + AT_rich Low_complexity Low_complexity 1 21 0 195 295 16 16 chr20 19309123 19309184 -52844698 + L2 LINE L2 3134 3194 -78 222 252 49 73 chr20 19309229 19309352 -52844530 + MIR SINE MIR 72 191 -71 287 190 35 0 chr20 19309462 19309520 -52844362 - MLT1G1 LTR MaLR -2 593 534 560 245 65 7 chr20 19310872 19311027 -52842855 + MER117 DNA MER1_type 2 165 -32 2257 113 3 0 chr20 19311170 19311472 -52842410 + AluSx SINE Alu 1 303 -9 1535 173 129 18 chr20 19311746 19312018 -52841864 - AluJb SINE Alu 0 302 1 221 347 178 27 chr20 19312389 19312614 -52841268 + L2 LINE L2 2985 3243 -29 445 293 74 42 chr20 19313585 19313800 -52840082 - L2 LINE L2 -17 3296 3075 288 91 0 0 chr20 19313895 19313939 -52839943 + (TTCA)n Simple_repeat Simple_repeat 2 45 0 893 308 28 18 chr20 19314693 19315129 -52838753 + LTR16C LTR ERVL 1 491 0 308 287 50 0 chr20 19315130 19315231 -52838651 - MIR SINE MIR -52 210 105 215 349 12 0 chr20 19315457 19315540 -52838342 - L2 LINE L2 -1 3271 3188 377 278 160 0 chr20 19317503 19317647 -52836235 - MIR SINE MIR -13 249 83 2066 130 0 3 chr20 19317743 19318051 -52835831 - AluSg SINE Alu 0 307 1 290 280 60 20 chr20 19318071 19318171 -52835711 + L2 LINE L2 298 401 -2913 221 284 134 8 chr20 19319071 19319205 -52834677 - MIR SINE MIR -20 242 92 191 334 80 65 chr20 19319294 19320036 -52833846 + L2 LINE L2 1352 2104 -1210 516 350 40 5 chr20 19320751 19320974 -52832908 + MIR SINE MIR 23 253 -9 599 304 20 49 chr20 19321643 19321890 -52831992 + MIR SINE MIR 21 260 -2 1426 198 96 31 chr20 19322649 19322972 -52830910 - MER2 DNA MER2_type 0 344 1 1056 248 75 28 chr20 19323854 19324213 -52829669 - HsTC2 DNA Tc2 -3 1895 1520 1452 177 24 0 chr20 19324795 19325043 -52828839 - AluJo SINE Alu -4 308 55 520 325 57 68 chr20 19325210 19325364 -52828518 - LTR16C LTR ERVL -33 458 304 2399 207 8 37 chr20 19325364 19325882 -52828000 + MLT1D LTR MaLR 1 503 -2 520 325 57 68 chr20 19325882 19326096 -52827786 - LTR16C LTR ERVL -187 304 94 282 29 0 0 chr20 19326242 19326277 -52827605 + (TG)n Simple_repeat Simple_repeat 2 36 0 2855 3 0 3 chr20 19326968 19327275 -52826607 - AluYa5 SINE Alu -5 306 1 245 330 30 0 chr20 19328643 19328743 -52825139 + LTR33 LTR ERVL 419 521 0 224 200 15 31 chr20 19329157 19329222 -52824660 + (TATATG)n Simple_repeat Simple_repeat 3 66 0 1349 136 5 0 chr20 19329974 19330187 -52823695 + L1MC/D LINE L1 5329 5542 -791 4537 207 29 13 chr20 19330265 19331745 -52822137 - L1MC/D LINE L1 -673 5940 4433 396 0 0 0 chr20 19331745 19331789 -52822093 + (TTTTA)n Simple_repeat Simple_repeat 2 45 0 4537 207 29 13 chr20 19331789 19331831 -52822051 - L1MC/D LINE L1 -2180 4433 4393 4648 172 9 74 chr20 19331831 19332789 -52821093 - L1MC/D LINE L1 -5498 928 33 270 226 134 73 chr20 19334164 19334328 -52819554 - MIR SINE MIR -74 188 15 248 263 10 40 chr20 19334539 19334638 -52819244 - MLT1H LTR MaLR 0 549 454 384 231 8 26 chr20 19334799 19334916 -52818966 - MLT1H LTR MaLR -376 173 59 342 274 19 0 chr20 19336115 19336221 -52817661 - L2 LINE L2 -77 3236 3129 312 244 49 32 chr20 19336227 19336350 -52817532 - L2 LINE L2 -508 2806 2682 801 97 14 28 chr20 19337834 19337978 -52815904 + (TTCC)n Simple_repeat Simple_repeat 3 144 0 1276 198 117 14 chr20 19337980 19338263 -52815619 - AluJo SINE Alu 0 312 1 2482 63 89 0 chr20 19338296 19338612 -52815270 - LTR14A LTR ERVK 0 344 1 278 265 0 41 chr20 19338707 19338805 -52815077 + MIR SINE MIR 159 252 -10 1252 270 101 13 chr20 19339115 19339493 -52814389 - LTR16C LTR ERVL 0 491 81 1931 251 62 10 chr20 19341919 19342438 -52811444 + L1ME3 LINE L1 5524 6069 -93 372 94 0 0 chr20 19342439 19342492 -52811390 + (TG)n Simple_repeat Simple_repeat 1 53 0 196 346 182 35 chr20 19342732 19342963 -52810919 - L3 LINE CR1 -7 1570 1306 596 318 60 86 chr20 19343322 19343803 -52810079 - L2 LINE L2 -2 3270 2803 233 324 167 20 chr20 19343984 19344188 -52809694 - L2 LINE L2 -2501 813 580 2140 120 0 0 chr20 19345001 19345292 -52808590 - AluSg1 SINE Alu -18 291 1 227 322 25 17 chr20 19345488 19345606 -52808276 + L2 LINE L2 3103 3221 -92 736 208 56 4 chr20 19346296 19346497 -52807385 + L1MB7 LINE L1 5926 6131 -43 226 267 168 69 chr20 19348676 19348807 -52805075 - MIR SINE MIR -71 191 48 993 331 105 38 chr20 19349672 19350443 -52803439 - L2 LINE L2 0 3313 2496 554 335 107 14 chr20 19350446 19350792 -52803090 - MLT1I LTR MaLR -4 405 28 609 270 27 77 chr20 19350822 19351081 -52802801 - L2 LINE L2 -812 2502 2257 636 183 17 25 chr20 19354904 19355145 -52798737 + CT-rich Low_complexity Low_complexity 1 239 0 522 101 45 11 chr20 19355148 19355237 -52798645 + T-rich Low_complexity Low_complexity 4 95 0 440 290 130 7 chr20 19357395 19357533 -52796349 + MIR3 SINE MIR 42 196 -12 245 248 114 48 chr20 19359547 19359652 -52794230 + MER5A DNA MER1_type 44 155 -34 182 262 0 0 chr20 19360194 19360236 -52793646 - L2 LINE L2 -782 2532 2491 516 222 0 9 chr20 19361518 19361626 -52792256 + Tigger3(Golem) DNA MER2_type 1 107 -2922 * 3640 148 45 18 chr20 19361618 19362348 -52791534 + Tigger3(Golem) DNA MER2_type 2278 3027 -2 350 276 189 27 chr20 19362363 19362548 -52791334 - MIR SINE MIR 0 262 48 186 255 21 0 chr20 19363323 19363370 -52790512 + L2 LINE L2 3266 3313 0 399 348 79 35 chr20 19364060 19364287 -52789595 - L2 LINE L2 0 3272 3036 1424 227 82 5 chr20 19364431 19364858 -52789024 + Charlie4a DNA MER1_type 35 494 -14 823 329 75 9 chr20 19364868 19365309 -52788573 + L2 LINE L2 2839 3308 -5 296 215 21 32 chr20 19366281 19366374 -52787508 + GA-rich Low_complexity Low_complexity 2 93 0 868 165 0 0 chr20 19366419 19366552 -52787330 + FLAM_C SINE Alu 1 133 -10 299 201 174 118 chr20 19366660 19366755 -52787127 - MIR SINE MIR 0 262 174 645 49 0 0 chr20 19366755 19366836 -52787046 + (TTCC)n Simple_repeat Simple_repeat 3 83 0 2041 84 0 49 chr20 19366840 19367126 -52786756 - AluY SINE Alu -39 272 1 299 201 174 118 chr20 19367126 19367169 -52786713 - MIR SINE MIR -90 172 111 332 245 138 0 chr20 19369802 19369896 -52783986 - MER96 DNA MER1_type? 0 175 69 222 296 265 0 chr20 19371577 19371709 -52782173 - MIR SINE MIR -25 237 71 537 296 136 20 chr20 19371957 19372251 -52781631 - MER102b DNA MER1_type -2 339 12 850 188 34 0 chr20 19372454 19372630 -52781252 - MER3 DNA MER1_type -22 187 6 23 78 0 0 chr20 19373677 19373728 -52780154 + AT_rich Low_complexity Low_complexity 1 51 0 210 194 83 0 chr20 19373803 19373839 -52780043 + L2 LINE L2 3154 3192 -80 815 257 25 38 chr20 19375538 19375775 -52778107 + L2 LINE L2 3078 3311 -2 505 205 216 32 chr20 19375782 19375843 -52778039 + MER20 DNA MER1_type 1 49 -170 2035 111 46 0 chr20 19375843 19376123 -52777759 - AluSg SINE Alu -17 293 1 505 205 216 32 chr20 19376123 19376246 -52777636 + MER20 DNA MER1_type 49 219 0 285 256 30 60 chr20 19376713 19376846 -52777036 - MLT1J LTR MaLR -57 454 326 270 116 0 0 chr20 19376971 19377014 -52776868 + (TG)n Simple_repeat Simple_repeat 2 44 0 2281 67 60 0 chr20 19378153 19378438 -52775444 + AluY SINE Alu 1 302 -9 26 0 0 0 chr20 19378754 19378780 -52775102 + AT_rich Low_complexity Low_complexity 1 26 0 41 96 0 0 chr20 19378954 19379079 -52774803 + AT_rich Low_complexity Low_complexity 1 125 0 812 170 21 27 chr20 19379851 19380039 -52773843 - MER53 DNA DNA -2 187 1 21 0 0 0 chr20 19380250 19380271 -52773611 + AT_rich Low_complexity Low_complexity 1 21 0 350 329 37 12 chr20 19380451 19380612 -52773270 + MIR3 SINE MIR 23 187 -21 387 83 0 0 chr20 19381225 19381285 -52772597 + (TC)n Simple_repeat Simple_repeat 2 61 0 251 356 68 20 chr20 19381698 19381844 -52772038 - MIR SINE MIR -108 154 2 21 57 0 0 chr20 19382653 19382688 -52771194 + AT_rich Low_complexity Low_complexity 1 35 0 1672 190 10 10 chr20 19382689 19382978 -52770904 - AluJo SINE Alu -23 289 1 912 221 6 0 chr20 19383044 19383202 -52770680 + MER5A DNA MER1_type 1 159 -30 247 325 114 87 chr20 19384641 19384718 -52769164 + L2 LINE L2 2835 2908 -364 2034 143 41 39 chr20 19384718 19385081 -52768801 + THE1B LTR MaLR 1 364 0 247 325 114 87 chr20 19385081 19385170 -52768712 + L2 LINE L2 2908 2993 -279 2293 128 0 0 chr20 19385170 19385476 -52768406 - AluSx SINE Alu -6 306 1 247 325 114 87 chr20 19385476 19385720 -52768162 + L2 LINE L2 2993 3257 -15 * 252 370 55 0 chr20 19385705 19385851 -52768031 - L2 LINE L2 -562 2752 2599 295 243 0 57 chr20 19385901 19385971 -52767911 - L2 LINE L2 0 3272 3207 302 367 77 24 chr20 19385991 19386239 -52767643 - L2 LINE L2 -747 2567 2307 24 53 0 0 chr20 19386696 19386734 -52767148 + AT_rich Low_complexity Low_complexity 1 38 0 2419 68 0 3 chr20 19387408 19387703 -52766179 + AluY SINE Alu 1 294 -17 268 339 144 50 chr20 19388019 19388302 -52765580 - L2 LINE L2 -571 2743 2413 2151 200 11 29 chr20 19388302 19388778 -52765104 - MLT1C LTR MaLR 0 467 1 268 339 144 50 chr20 19388778 19388875 -52765007 - L2 LINE L2 -901 2413 2327 429 299 39 53 chr20 19389852 19390059 -52763823 + MIR SINE MIR 17 220 -42 532 257 37 32 chr20 19390926 19391113 -52762769 + MIR SINE MIR 75 262 0 316 239 30 45 chr20 19391653 19391787 -52762095 - MLT1H LTR MaLR -374 175 44 21 0 0 0 chr20 19392440 19392461 -52761421 + AT_rich Low_complexity Low_complexity 1 21 0 2063 107 36 0 chr20 19393675 19393956 -52759926 + AluSq SINE Alu 1 291 -22 187 344 0 31 chr20 19394113 19394177 -52759705 - MIR SINE MIR -167 95 34 224 122 24 0 chr20 19395792 19395833 -52758049 + (TCCA)n Simple_repeat Simple_repeat 3 44 0 1096 231 77 89 chr20 19395988 19396087 -52757795 + MLT1F1 LTR MaLR 3 102 -465 2100 109 0 3 chr20 19396087 19396396 -52757486 - AluSg SINE Alu 0 308 1 1096 231 77 89 chr20 19396396 19396854 -52757028 + MLT1F1 LTR MaLR 102 554 -13 573 259 40 70 chr20 19397542 19397940 -52755942 - L1MC4 LINE L1 -122 7920 7535 288 229 10 0 chr20 19397946 19398042 -52755840 + (TAAA)n Simple_repeat Simple_repeat 2 98 0 667 286 27 46 chr20 19398063 19398433 -52755449 - L1MC4 LINE L1 -530 7512 7150 362 259 161 35 chr20 19398452 19398626 -52755256 - MIR SINE MIR -37 225 30 404 324 67 78 chr20 19398817 19399190 -52754692 - HAL1 LINE L1 -2115 392 24 1848 130 38 3 chr20 19399299 19399592 -52754290 + AluJb SINE Alu 1 303 -9 783 320 59 20 chr20 19400317 19400707 -52753175 + LTR16C LTR ERVL 87 491 0 453 241 84 30 chr20 19400857 19401023 -52752859 - L2 LINE L2 -14 3299 3125 233 280 20 0 chr20 19401071 19401121 -52752761 + L2 LINE L2 3191 3241 -31 1643 168 10 36 chr20 19401123 19401432 -52752450 - AluJb SINE Alu -11 301 1 182 356 100 30 chr20 19401620 19401890 -52751992 - L2 LINE L2 -554 2760 2472 24 53 0 0 chr20 19402249 19402287 -52751595 + AT_rich Low_complexity Low_complexity 1 38 0 1510 75 65 0 chr20 19403356 19403581 -52750301 + AluY SINE Alu 94 331 0 242 309 64 0 chr20 19405670 19405764 -52748118 - MIR SINE MIR -13 249 150 583 75 0 0 chr20 19406086 19406166 -52747716 + MADE1 DNA Mariner 1 80 0 2340 40 4 0 chr20 19406683 19406955 -52746927 + AluY SINE Alu 35 307 -4 382 300 39 23 chr20 19407928 19408058 -52745824 + MIR SINE MIR 47 178 -84 1919 161 6 6 chr20 19408183 19408494 -52745388 + AluSx SINE Alu 1 311 -1 626 267 49 21 chr20 19412370 19412696 -52741186 - L1MC4 LINE L1 0 8042 7708 944 161 161 20 chr20 19413313 19413512 -52740370 - AluJo SINE Alu -7 305 79 231 316 20 20 chr20 19413647 19413745 -52740137 + MIR3 SINE MIR 100 197 -11 2060 113 0 45 chr20 19413904 19414213 -52739669 + AluSx SINE Alu 1 295 -17 24 32 0 0 chr20 19414935 19414966 -52738916 + AT_rich Low_complexity Low_complexity 1 31 0 820 264 80 17 chr20 19415409 19415708 -52738174 - MER102a DNA MER1_type -12 318 1 235 276 29 29 chr20 19416041 19416146 -52737736 - MLT1I LTR MaLR 0 409 305 297 284 11 11 chr20 19416293 19416381 -52737501 - MLT1J1 LTR MaLR -290 156 69 1822 168 53 30 chr20 19416974 19417408 -52736474 - L1MA8 LINE L1 -4 6287 5844 2230 132 13 106 chr20 19417492 19418030 -52735852 - L1MA8 LINE L1 -432 5859 5372 629 302 90 17 chr20 19418164 19418518 -52735364 - MLT1K LTR MaLR -15 573 194 180 111 0 0 chr20 19418584 19418611 -52735271 + (GAAAA)n Simple_repeat Simple_repeat 3 29 0 24 53 0 0 chr20 19419207 19419245 -52734637 + AT_rich Low_complexity Low_complexity 1 38 0 202 125 12 62 chr20 19423073 19423153 -52730729 + (TGAA)n Simple_repeat Simple_repeat 2 77 0 552 251 62 37 chr20 19423383 19423626 -52730256 - L1ME3A LINE L1 0 6170 5922 284 254 35 42 chr20 19423874 19424016 -52729866 - L1ME1 LINE L1 -62 6104 5964 683 231 53 33 chr20 19424904 19425203 -52728679 - L1MC5 LINE L1 -36 7925 7621 550 304 61 17 chr20 19425981 19426211 -52727671 + MIR SINE MIR 15 254 -8 615 266 50 29 chr20 19426246 19426525 -52727357 + L1ME3A LINE L1 5885 6169 -1 507 320 19 22 chr20 19427867 19428235 -52725647 + L2 LINE L2 1406 1864 -1450 184 271 119 0 chr20 19428237 19428296 -52725586 + L2 LINE L2 2393 2458 -856 1852 223 87 31 chr20 19428329 19428939 -52724943 - LTR48B LTR ERV1 0 644 1 455 238 150 86 chr20 19429134 19429520 -52724362 - LTR50 LTR ERVL -41 754 344 2063 128 0 0 chr20 19429542 19429838 -52724044 + AluSx SINE Alu 1 296 -16 287 196 157 0 chr20 19429899 19430001 -52723881 - LTR50 LTR ERVL -638 157 40 2031 125 30 13 chr20 19431337 19431641 -52722241 - AluSx SINE Alu -3 309 1 423 310 49 27 chr20 19431813 19431997 -52721885 + MER5A DNA MER1_type 2 189 0 957 303 44 34 chr20 19432781 19432890 -52720992 + LTR16C LTR ERVL 1 107 -384 2258 110 3 3 chr20 19432890 19433198 -52720684 - AluSg SINE Alu -2 308 1 957 303 44 34 chr20 19433198 19433564 -52720318 + LTR16C LTR ERVL 107 481 -10 809 219 10 42 chr20 19433863 19434055 -52719827 - MER5A DNA MER1_type -3 186 1 467 280 94 104 chr20 19434410 19434746 -52719136 + L1M4 LINE L1 4254 4592 -1554 2579 89 14 0 chr20 19434746 19435096 -52718786 - THE1A LTR MaLR 0 355 1 11909 93 1 5 chr20 19435096 19436683 -52717199 - THE1A-int LTR MaLR 0 1580 1 2863 65 3 0 chr20 19436683 19437037 -52716845 - THE1A LTR MaLR 0 355 1 467 280 94 104 chr20 19437037 19437080 -52716802 + L1M4 LINE L1 4590 4632 -1514 2898 131 39 2 chr20 19437080 19437567 -52716315 - L1MC1 LINE L1 -18 6315 5811 467 280 94 104 chr20 19437567 19437781 -52716101 + L1M4 LINE L1 4632 4844 -1302 22 35 0 0 chr20 19437792 19437821 -52716061 + AT_rich Low_complexity Low_complexity 1 29 0 378 302 28 0 chr20 19438012 19438118 -52715764 - MIR SINE MIR -65 143 35 1942 138 40 0 chr20 19438303 19438737 -52715145 + AluSx SINE Alu 1 446 0 270 0 0 0 chr20 19439289 19439319 -52714563 + (A)n Simple_repeat Simple_repeat 1 30 0 716 288 30 26 chr20 19439743 19439976 -52713906 + MIR SINE MIR 16 249 -13 183 205 0 0 chr20 19441914 19441953 -52711929 + CT-rich Low_complexity Low_complexity 2 40 0 314 286 0 71 chr20 19442183 19442281 -52711601 - L1ME LINE L1 -547 5574 5484 329 330 84 51 chr20 19442329 19442662 -52711220 - L1ME LINE L1 -944 5202 4859 900 169 33 0 chr20 19442812 19442995 -52710887 + L1MB2 LINE L1 5981 6169 -2 735 251 127 11 chr20 19443060 19443494 -52710388 + L1ME4a LINE L1 5553 6036 -85 292 357 42 0 chr20 19443606 19443749 -52710133 - MIR SINE MIR -2 260 112 2224 102 0 3 chr20 19445499 19445794 -52708088 + AluSx SINE Alu 1 294 -18 551 196 27 0 chr20 19446516 19446628 -52707254 + MER53 DNA DNA 75 189 0 2286 53 3 46 chr20 19446801 19447103 -52706779 + AluSc SINE Alu 1 289 -20 307 194 233 10 chr20 19447225 19447328 -52706554 + MIR SINE MIR 72 197 -65 2305 98 0 0 chr20 19449449 19449744 -52704138 + AluY SINE Alu 1 295 -16 1047 318 41 6 chr20 19449878 19450218 -52703664 + LTR16A LTR ERVL 96 447 -3 2114 105 16 33 chr20 19450920 19451225 -52702657 + AluSx SINE Alu 1 300 -12 255 322 136 8 chr20 19452073 19452191 -52701691 + MER5B DNA MER1_type 44 176 -2 324 0 0 0 chr20 19453156 19453192 -52700690 + (TG)n Simple_repeat Simple_repeat 2 37 0 284 362 55 12 chr20 19453997 19454160 -52699722 + L2 LINE L2 2866 3035 -237 2395 93 3 0 chr20 19454423 19454724 -52699158 + AluSp SINE Alu 1 302 -11 762 206 0 0 chr20 19454738 19454869 -52699013 + FLAM_C SINE Alu 3 133 -10 245 394 11 0 chr20 19454874 19454968 -52698914 - MIR SINE MIR -79 129 35 2309 107 0 0 chr20 19455228 19455536 -52698346 - AluSx SINE Alu -4 308 1 1300 258 59 19 chr20 19457959 19458381 -52695501 - MLT1C LTR MaLR -28 439 1 225 0 0 0 chr20 19458694 19458719 -52695163 + (T)n Simple_repeat Simple_repeat 1 25 0 448 293 56 56 chr20 19458837 19459052 -52694830 - MIR SINE MIR -12 250 36 307 332 129 20 chr20 19461247 19461449 -52692433 - MIR SINE MIR -26 236 13 2306 110 0 3 chr20 19463798 19464106 -52689776 - AluSx SINE Alu -5 307 1 306 235 0 49 chr20 19465345 19465426 -52688456 - L2 LINE L2 0 3313 3237 198 0 0 0 chr20 19465798 19465820 -52688062 + (T)n Simple_repeat Simple_repeat 1 22 0 4693 117 28 20 chr20 19466448 19467134 -52686748 - LTR8 LTR ERV1 0 691 1 187 316 18 0 chr20 19467713 19467770 -52686112 - L2 LINE L2 -663 2651 2594 248 291 106 20 chr20 19468136 19468287 -52685595 + MIR SINE MIR 99 262 0 21 36 0 0 chr20 19468338 19468366 -52685516 + AT_rich Low_complexity Low_complexity 1 28 0 228 35 0 0 chr20 19468474 19468503 -52685379 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 25 0 0 0 chr20 19469164 19469189 -52684693 + AT_rich Low_complexity Low_complexity 1 25 0 354 264 0 0 chr20 19470033 19470105 -52683777 + Tigger7 DNA MER2_type 1 72 -478 1679 157 26 4 chr20 19470108 19470376 -52683506 - Tigger7 DNA MER2_type -203 347 74 2130 105 65 12 chr20 19470377 19470701 -52683181 + Tigger7 DNA MER2_type 2147 2487 0 738 92 23 0 chr20 19471375 19471505 -52682377 + (TCTA)n Simple_repeat Simple_repeat 2 134 0 2269 214 52 58 chr20 19471580 19472137 -52681745 - MLT2B3 LTR ERVL 0 554 1 999 220 17 60 chr20 19472243 19472475 -52681407 + MER58A DNA MER1_type 3 224 0 225 0 0 0 chr20 19473606 19473631 -52680251 + (A)n Simple_repeat Simple_repeat 1 25 0 597 278 27 11 chr20 19473875 19474062 -52679820 + L3b LINE CR1 1302 1491 -92 260 240 0 0 chr20 19474177 19474227 -52679655 - L2 LINE L2 -8 3305 3256 2136 111 0 34 chr20 19474279 19474576 -52679306 + AluSx SINE Alu 5 291 -21 180 0 0 0 chr20 19474931 19474951 -52678931 + (A)n Simple_repeat Simple_repeat 1 20 0 3431 136 148 25 chr20 19475032 19475679 -52678203 - LTR8A LTR ERV1 0 727 1 490 282 72 6 chr20 19475949 19476130 -52677752 - MIR SINE MIR -56 206 14 1379 232 32 6 chr20 19476215 19476530 -52677352 - MLT1H1 LTR MaLR 0 555 233 1847 197 88 24 chr20 19476530 19476997 -52676885 - L1ME3A LINE L1 -215 5955 5459 238 327 47 37 chr20 19478154 19478261 -52675621 + L2 LINE L2 3116 3223 -49 659 256 0 0 chr20 19479420 19479553 -52674329 - MER5B DNA MER1_type 0 178 46 2174 97 0 79 chr20 19479558 19479898 -52673984 + AluSq SINE Alu 1 313 0 23 0 0 0 chr20 19479903 19479926 -52673956 + AT_rich Low_complexity Low_complexity 1 23 0 351 298 60 60 chr20 19479991 19480142 -52673740 - L2 LINE L2 0 3272 3122 657 239 0 0 chr20 19480489 19480669 -52673213 + CT-rich Low_complexity Low_complexity 1 180 0 24 32 0 0 chr20 19480922 19480953 -52672929 + AT_rich Low_complexity Low_complexity 1 31 0 264 333 50 0 chr20 19482485 19482584 -52671298 + LTR67 LTR ERVL 101 204 -353 257 354 50 10 chr20 19482967 19483066 -52670816 - MIR SINE MIR -136 126 24 2175 131 33 12 chr20 19483112 19483448 -52670434 + L1PA16 LINE L1 5815 6157 -9 2272 114 0 13 chr20 19483488 19483846 -52670036 + AluSx SINE Alu 1 354 0 456 291 139 12 chr20 19484856 19485028 -52668854 + MIR SINE MIR 16 209 -53 498 294 0 3 chr20 19487493 19487785 -52666097 + GA-rich Low_complexity Low_complexity 1 290 0 195 245 0 31 chr20 19487804 19487902 -52665980 + GA-rich Low_complexity Low_complexity 2 96 0 338 279 16 0 chr20 19487948 19488070 -52665812 + GA-rich Low_complexity Low_complexity 1 124 0 21 0 0 0 chr20 19489462 19489483 -52664399 + AT_rich Low_complexity Low_complexity 1 21 0 396 0 0 0 chr20 19490300 19490344 -52663538 + (CA)n Simple_repeat Simple_repeat 2 45 0 285 75 0 0 chr20 19490456 19490496 -52663386 + (TG)n Simple_repeat Simple_repeat 1 40 0 627 370 80 8 chr20 19490883 19491359 -52662523 + L2 LINE L2 2804 3313 0 202 274 14 14 chr20 19491383 19491456 -52662426 - MIR SINE MIR -44 218 146 360 178 33 33 chr20 19491465 19491555 -52662327 - MLT1J LTR MaLR -7 504 415 505 281 117 35 chr20 19491584 19491840 -52662042 - MLT1J LTR MaLR -196 315 39 223 276 13 26 chr20 19491863 19491939 -52661943 - MIR SINE MIR -83 125 51 257 276 32 77 chr20 19492239 19492395 -52661487 - MIR SINE MIR -14 248 100 2218 115 3 0 chr20 19492395 19492691 -52661191 - AluSq SINE Alu -16 297 1 478 280 39 50 chr20 19494122 19494240 -52659642 - MIR SINE MIR -60 202 85 2389 104 23 49 chr20 19494240 19494625 -52659257 + THE1C LTR MaLR 1 375 0 478 280 39 50 chr20 19494625 19494688 -52659194 - MIR SINE MIR -177 85 23 284 364 65 45 chr20 19494888 19495135 -52658747 - L2 LINE L2 -205 3067 2816 288 237 0 0 chr20 19495184 19495243 -52658639 + Charlie7 DNA MER1_type 43 101 -2511 2212 107 3 17 chr20 19495425 19495724 -52658158 - AluSx SINE Alu -15 297 3 538 288 176 21 chr20 19495994 19496369 -52657513 + L2 LINE L2 2863 3295 -18 422 114 14 0 chr20 19496386 19496456 -52657426 + (TGGA)n Simple_repeat Simple_repeat 4 74 0 402 254 34 50 chr20 19496575 19496770 -52657112 - MLT1K LTR MaLR -2 586 395 * 555 90 0 0 chr20 19496769 19496847 -52657035 + (TCCCC)n Simple_repeat Simple_repeat 5 82 0 * 690 80 18 9 chr20 19496844 19496956 -52656926 + (TTTC)n Simple_repeat Simple_repeat 2 114 0 272 291 0 25 chr20 19497353 19497432 -52656450 - MLT1L LTR MaLR -414 201 125 433 303 6 69 chr20 19500420 19500595 -52653287 + MIR SINE MIR 59 222 -40 232 116 23 0 chr20 19502138 19502181 -52651701 - HSMAR1 DNA Mariner 0 1287 1244 398 69 17 0 chr20 19502808 19502866 -52651016 + (TG)n Simple_repeat Simple_repeat 2 60 0 213 179 38 19 chr20 19504724 19504830 -52649052 + GA-rich Low_complexity Low_complexity 1 108 0 2134 104 3 3 chr20 19505413 19505702 -52648180 + AluSq SINE Alu 1 289 -24 30 27 0 0 chr20 19505815 19505852 -52648030 + AT_rich Low_complexity Low_complexity 1 37 0 186 189 0 0 chr20 19505906 19505943 -52647939 + T-rich Low_complexity Low_complexity 1 37 0 261 0 0 0 chr20 19507007 19507036 -52646846 + (T)n Simple_repeat Simple_repeat 1 29 0 374 200 25 0 chr20 19507277 19507357 -52646525 + MER20 DNA MER1_type 42 123 -96 829 133 12 40 chr20 19507357 19507558 -52646324 - MSTB1 LTR MaLR 0 432 262 478 286 45 30 chr20 19507681 19507814 -52646068 + L2 LINE L2 3136 3270 -2 1015 215 9 27 chr20 19508791 19508913 -52644969 + MER20 DNA MER1_type 1 119 -100 1965 194 28 31 chr20 19508913 19509371 -52644511 - MSTB2 LTR MaLR 0 457 1 1015 215 9 27 chr20 19509371 19509471 -52644411 + MER20 DNA MER1_type 119 219 0 195 296 49 12 chr20 19509483 19509564 -52644318 + MIR SINE MIR 118 201 -61 273 356 76 0 chr20 19509888 19510006 -52643876 + MER5A DNA MER1_type 7 133 -56 318 278 72 0 chr20 19510054 19510151 -52643731 + L2 LINE L2 3192 3295 -18 311 203 103 128 chr20 19510711 19510935 -52642947 - Charlie8 DNA MER1_type -3 1425 1197 2030 145 3 3 chr20 19510935 19511238 -52642644 - AluSx SINE Alu -9 303 1 311 203 103 128 chr20 19511238 19511292 -52642590 - Charlie8 DNA MER1_type -231 1197 59 316 250 121 0 chr20 19512156 19512280 -52641602 - MLT1H LTR MaLR 0 549 411 299 248 17 34 chr20 19512520 19512637 -52641245 - MLT1H LTR MaLR -412 137 23 294 247 93 0 chr20 19512732 19512829 -52641053 + MER113 DNA MER1_type? 306 411 -110 369 214 128 26 chr20 19514348 19514465 -52639417 - L2 LINE L2 -1 3312 3184 467 269 83 84 chr20 19514589 19514755 -52639127 - L1MC4 LINE L1 -2 8040 7875 2178 163 56 12 chr20 19514755 19515165 -52638717 + MSTA LTR MaLR 1 428 0 444 62 0 0 chr20 19515165 19515229 -52638653 + (TCTA)n Simple_repeat Simple_repeat 4 67 0 467 269 83 84 chr20 19515229 19515676 -52638206 - L1MC4 LINE L1 -166 7876 7430 2126 120 0 23 chr20 19515676 19515984 -52637898 + AluSx SINE Alu 4 304 -8 2251 110 0 13 chr20 19515985 19516293 -52637589 + AluSx SINE Alu 2 305 -7 467 269 83 84 chr20 19516293 19516622 -52637260 - L1MC4 LINE L1 -611 7431 7095 248 265 73 0 chr20 19516744 19516812 -52637070 - MIR3 SINE MIR -21 187 115 671 219 110 0 chr20 19517595 19517759 -52636123 - MIR SINE MIR -10 252 71 192 299 122 56 chr20 19518510 19518617 -52635265 + MIR SINE MIR 19 132 -76 546 259 180 53 chr20 19518669 19519141 -52634741 - MLT1H LTR MaLR 0 549 18 342 0 0 0 chr20 19520051 19520089 -52633793 + (CA)n Simple_repeat Simple_repeat 2 39 0 204 40 0 0 chr20 19520095 19520120 -52633762 + (TTCA)n Simple_repeat Simple_repeat 3 27 0 644 271 133 52 chr20 19520144 19520478 -52633404 + MLT1K LTR MaLR 2 394 -194 2404 101 49 9 chr20 19520478 19520826 -52633056 + THE1B LTR MaLR 1 362 -2 644 271 133 52 chr20 19520826 19521011 -52632871 + MLT1K LTR MaLR 394 563 -25 539 181 245 0 chr20 19521533 19521688 -52632194 + MER3 DNA MER1_type 9 201 -8 1870 134 43 0 chr20 19521756 19522033 -52631849 + AluSx SINE Alu 3 291 -21 586 270 37 5 chr20 19522105 19522270 -52631612 - MER5B DNA MER1_type -2 176 18 496 243 135 0 chr20 19522768 19522929 -52630953 + MER5A DNA MER1_type 4 189 0 282 56 0 0 chr20 19523293 19523329 -52630553 + (TAAA)n Simple_repeat Simple_repeat 1 36 0 862 240 116 95 chr20 19523399 19523915 -52629967 + MLT1F LTR MaLR 14 540 -2 2156 172 9 28 chr20 19524239 19524705 -52629177 - L1PA16 LINE L1 -1075 5071 4615 5334 126 40 3 chr20 19524722 19524927 -52628955 + L1PA16 LINE L1 5080 5276 -890 195 42 0 0 chr20 19524927 19524951 -52628931 + (CAA)n Simple_repeat Simple_repeat 1 24 0 5334 126 40 3 chr20 19524951 19525788 -52628094 + L1PA16 LINE L1 5276 6149 -17 731 206 82 0 chr20 19526214 19526384 -52627498 - MER58A DNA MER1_type -40 184 1 282 243 72 4 chr20 19526402 19526535 -52627347 + MER5A DNA MER1_type 1 188 -1 202 337 0 54 chr20 19526746 19526838 -52627044 - MIR3 SINE MIR -31 177 91 1312 260 102 21 chr20 19527192 19527869 -52626013 + L1PB1 LINE L1 6 737 -6126 14352 191 10 12 chr20 19527874 19531757 -52622125 + L1PB1 LINE L1 1113 5189 -1678 2291 107 0 10 chr20 19531757 19532066 -52621816 + AluSg SINE Alu 5 310 0 14352 191 10 12 chr20 19532066 19533738 -52620144 + L1PB1 LINE L1 5189 6862 -5 22 35 0 0 chr20 19533738 19533767 -52620115 + AT_rich Low_complexity Low_complexity 1 29 0 1787 162 141 11 chr20 19534277 19534654 -52619228 - MSTA LTR MaLR -2 426 1 194 274 20 0 chr20 19535237 19535288 -52618594 - L2 LINE L2 0 3272 3221 267 180 0 0 chr20 19535800 19535850 -52618032 - MIR SINE MIR -33 229 180 464 270 38 54 chr20 19535917 19536102 -52617780 + L2 LINE L2 3132 3313 0 254 341 102 12 chr20 19536141 19536308 -52617574 - MIR SINE MIR -75 187 6 284 313 69 38 chr20 19536363 19536523 -52617359 + MIR SINE MIR 28 192 -70 984 303 85 60 chr20 19536847 19537481 -52616401 + L2 LINE L2 2173 2822 -492 614 335 64 45 chr20 19537742 19538144 -52615738 + L2 LINE L2 2810 3224 -89 2228 115 0 0 chr20 19538144 19538440 -52615442 - AluSq SINE Alu -17 296 1 614 335 64 45 chr20 19538440 19538520 -52615362 + L2 LINE L2 3224 3301 -12 460 283 88 18 chr20 19540103 19540145 -52613737 - MIR SINE MIR -8 254 216 197 33 33 0 chr20 19540145 19540175 -52613707 + (TA)n Simple_repeat Simple_repeat 2 32 0 460 283 88 18 chr20 19540175 19540331 -52613551 - MIR SINE MIR -46 216 49 186 143 0 0 chr20 19540434 19540469 -52613413 + (A)n Simple_repeat Simple_repeat 1 35 0 2391 99 0 0 chr20 19540568 19540871 -52613011 - AluSx SINE Alu -9 303 1 365 292 101 112 chr20 19541451 19541879 -52612003 - L2 LINE L2 -13 3259 2837 21 36 0 0 chr20 19542314 19542342 -52611540 + AT_rich Low_complexity Low_complexity 1 28 0 21 71 0 0 chr20 19542398 19542440 -52611442 + AT_rich Low_complexity Low_complexity 1 42 0 24 53 0 0 chr20 19543526 19543564 -52610318 + AT_rich Low_complexity Low_complexity 1 38 0 2260 118 0 3 chr20 19543582 19543887 -52609995 + AluSx SINE Alu 1 304 -8 627 246 145 39 chr20 19547513 19548038 -52605844 - MLT1G LTR MaLR -2 588 1 534 212 53 71 chr20 19548161 19548208 -52605674 - MER63A DNA MER1_type -1478 210 164 2328 117 0 0 chr20 19548208 19548507 -52605375 - AluSx SINE Alu -13 299 1 534 212 53 71 chr20 19548507 19548646 -52605236 - MER63A DNA MER1_type -1524 164 25 24 0 0 0 chr20 19548818 19548842 -52605040 + AT_rich Low_complexity Low_complexity 1 24 0 2099 53 0 0 chr20 19548855 19549098 -52604784 + AluY SINE Alu 53 295 -16 910 188 0 0 chr20 19549098 19549242 -52604640 - FRAM SINE Alu -32 144 1 251 337 0 23 chr20 19549248 19549334 -52604548 + MIR SINE MIR 26 109 -153 2179 98 7 0 chr20 19549388 19549675 -52604207 - AluSc SINE Alu -20 289 1 414 0 0 0 chr20 19549755 19549801 -52604081 + (TTGG)n Simple_repeat Simple_repeat 2 47 0 422 49 16 0 chr20 19552682 19552743 -52601139 + (CA)n Simple_repeat Simple_repeat 2 63 0 184 284 95 77 chr20 19553050 19553335 -52600547 + L2 LINE L2 2933 3222 -91 * 308 252 259 7 chr20 19553311 19553446 -52600436 + MER5A DNA MER1_type 15 183 -6 320 228 25 25 chr20 19553458 19553537 -52600345 - L1 LINE L1 -3012 3134 3056 5123 179 20 5 chr20 19553556 19554628 -52599254 + L1MA4 LINE L1 3773 4860 -1286 5712 23 0 0 chr20 19554918 19555533 -52598349 - SVA Other Other -1 1385 771 4600 159 47 20 chr20 19555533 19556942 -52596940 + L1MA4 LINE L1 4845 6294 -6 1106 263 107 13 chr20 19557437 19557946 -52595936 + MLT1G LTR MaLR 1 520 -70 559 266 101 0 chr20 19558017 19558186 -52595696 + MER58A DNA MER1_type 29 214 -10 1073 189 22 0 chr20 19558196 19558381 -52595501 + MER5A DNA MER1_type 1 189 0 317 210 32 0 chr20 19558480 19558542 -52595340 + MLT1J LTR MaLR 110 173 -338 2363 45 0 7 chr20 19558708 19559025 -52594857 + AluY SINE Alu 1 315 0 188 311 176 25 chr20 19559494 19559613 -52594269 - MIR SINE MIR -112 150 14 342 281 52 10 chr20 19560963 19561059 -52592823 - MER91C DNA MER1_type -6 134 35 23 0 0 0 chr20 19561804 19561827 -52592055 + AT_rich Low_complexity Low_complexity 1 23 0 33 43 0 0 chr20 19562152 19562199 -52591683 + AT_rich Low_complexity Low_complexity 1 47 0 292 179 24 49 chr20 19562211 19562334 -52591548 + (TATAA)n Simple_repeat Simple_repeat 1 120 0 887 199 45 6 chr20 19562733 19562909 -52590973 + MER5A DNA MER1_type 2 184 -5 473 326 24 30 chr20 19563244 19563599 -52590283 - L1ME LINE L1 -415 5706 5351 357 311 102 20 chr20 19563755 19563999 -52589883 - L1ME LINE L1 -1006 5140 4877 319 267 55 20 chr20 19564371 19564517 -52589365 - L1ME LINE L1 -1684 4462 4312 307 339 48 12 chr20 19565679 19565844 -52588038 - L1ME LINE L1 -1949 4197 4027 428 309 100 61 chr20 19566019 19566530 -52587352 - L1ME LINE L1 -2493 3653 3123 472 284 40 37 chr20 19566560 19566856 -52587026 - MARNA DNA Mariner -142 444 148 343 285 119 13 chr20 19568171 19568322 -52585560 - HAL1b LINE L1 -27 1321 1155 30 45 0 0 chr20 19568361 19568405 -52585477 + AT_rich Low_complexity Low_complexity 1 44 0 2257 107 28 6 chr20 19568461 19568817 -52585065 + L1PA16 LINE L1 5801 6164 -2 2166 104 3 0 chr20 19568871 19569160 -52584722 + AluSx SINE Alu 21 310 -2 504 281 82 51 chr20 19569244 19569771 -52584111 - HAL1b LINE L1 -533 815 273 186 43 0 0 chr20 19570835 19570858 -52583024 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 2537 48 0 19 chr20 19570941 19571256 -52582626 - AluY SINE Alu -2 309 1 198 0 0 0 chr20 19573383 19573405 -52580477 + (T)n Simple_repeat Simple_repeat 1 22 0 555 281 90 58 chr20 19573433 19573867 -52580015 + MLT1H LTR MaLR 102 549 0 206 338 0 0 chr20 19573870 19573944 -52579938 - MIR SINE MIR -11 251 178 272 371 16 24 chr20 19574237 19574361 -52579521 + L2 LINE L2 2933 3055 -217 1148 184 68 96 chr20 19574369 19574734 -52579148 + MLT1A1 LTR MaLR 1 355 -10 210 320 20 0 chr20 19574826 19574876 -52579006 + L2 LINE L2 3124 3174 -98 * 429 250 128 35 chr20 19574862 19575034 -52578848 + MIR SINE MIR 30 217 -45 24 32 0 0 chr20 19575039 19575070 -52578812 + AT_rich Low_complexity Low_complexity 1 31 0 557 347 50 26 chr20 19575202 19575545 -52578337 + L2 LINE L2 2394 2744 -570 204 67 0 0 chr20 19576465 19576495 -52577387 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 481 317 70 33 chr20 19577867 19578110 -52575772 + MIR SINE MIR 3 254 -8 274 275 44 138 chr20 19578118 19578176 -52575706 + MIR3 SINE MIR 16 78 -130 2092 140 0 19 chr20 19578176 19578483 -52575399 + AluSx SINE Alu 5 307 -5 1095 69 0 0 chr20 19578483 19578628 -52575254 + (GGAA)n Simple_repeat Simple_repeat 4 148 0 274 275 44 138 chr20 19578634 19578735 -52575147 + MIR3 SINE MIR 78 160 -48 231 254 0 16 chr20 19578865 19578928 -52574954 + (TA)n Simple_repeat Simple_repeat 2 63 0 259 265 10 10 chr20 19579970 19580068 -52573814 - Charlie8 DNA MER1_type -2255 162 65 2611 155 17 2 chr20 19580506 19581173 -52572709 + MER72 LTR ERV1 10 718 -4 182 364 11 68 chr20 19582681 19582769 -52571113 - MIR SINE MIR -88 120 38 695 193 122 79 chr20 19583102 19583275 -52570607 + THE1C LTR MaLR 1 165 -210 584 130 0 0 chr20 19583275 19583367 -52570515 - L1PB1 LINE L1 -1 6150 6059 695 193 122 79 chr20 19583367 19583570 -52570312 + THE1C LTR MaLR 165 375 0 338 279 195 32 chr20 19583679 19583833 -52570049 + MIR SINE MIR 36 214 -48 252 0 0 0 chr20 19583993 19584021 -52569861 + (TA)n Simple_repeat Simple_repeat 2 29 0 2456 63 0 3 chr20 19584021 19584320 -52569562 - AluY SINE Alu -13 298 1 256 131 16 33 chr20 19584455 19584516 -52569366 + (CATA)n Simple_repeat Simple_repeat 4 63 0 1805 186 0 25 chr20 19584640 19584957 -52568925 + AluJb SINE Alu 1 309 -3 247 163 0 0 chr20 19585175 19585218 -52568664 + MLT1I LTR MaLR 95 137 -272 246 202 29 6 chr20 19585442 19585524 -52568358 + MLT1G1 LTR MaLR 323 579 -1 190 357 194 0 chr20 19585632 19585730 -52568152 - MIR3 SINE MIR -5 203 87 862 133 0 0 chr20 19585910 19586038 -52567844 + FRAM SINE Alu 47 174 -2 28 0 0 0 chr20 19586038 19586066 -52567816 + AT_rich Low_complexity Low_complexity 1 28 0 6801 130 25 45 chr20 19586398 19586680 -52567202 + Tigger3b DNA MER2_type 2 288 -2740 2211 80 4 0 chr20 19586680 19586992 -52566890 + AluSx SINE Alu 5 317 0 6801 130 25 45 chr20 19586992 19587963 -52565919 + Tigger3b DNA MER2_type 288 1230 -1 336 64 0 0 chr20 19587963 19588010 -52565872 + (CA)n Simple_repeat Simple_repeat 2 48 0 532 365 11 0 chr20 19588637 19588815 -52565067 - MER91B DNA MER1_type -10 180 1 252 179 119 24 chr20 19589207 19589291 -52564591 + MLT1H LTR MaLR 233 324 -225 * 293 241 24 0 chr20 19589289 19589372 -52564510 + MLT1H LTR MaLR 464 548 -1 1832 281 82 24 chr20 19590970 19591738 -52562144 - L2 LINE L2 -203 3110 2305 629 245 25 49 chr20 19593418 19593663 -52560219 - MLT1H LTR MaLR -270 279 41 331 303 123 12 chr20 19593730 19593892 -52559990 + MIR SINE MIR 1 180 -82 228 200 0 0 chr20 19593949 19593999 -52559883 + (TTA)n Simple_repeat Simple_repeat 2 51 0 2115 117 0 0 chr20 19594777 19595083 -52558799 + AluSx SINE Alu 1 306 0 2273 115 3 0 chr20 19596950 19597255 -52556627 - AluSg1 SINE Alu -3 306 1 1927 142 0 16 chr20 19597280 19597583 -52556299 + AluJo SINE Alu 1 298 -14 2192 112 3 3 chr20 19597583 19597888 -52555994 + AluSq SINE Alu 1 305 -8 1441 195 71 55 chr20 19598178 19598542 -52555340 + MLT1A2 LTR MaLR 5 374 0 207 273 154 18 chr20 19600363 19600473 -52553409 - L2 LINE L2 -5 3308 3184 456 263 113 12 chr20 19600894 19600964 -52552918 + MER5A DNA MER1_type 7 69 -120 2032 150 0 0 chr20 19600964 19601257 -52552625 + AluSx SINE Alu 1 293 -19 456 263 113 12 chr20 19601257 19601346 -52552536 + MER5A DNA MER1_type 69 182 -7 1929 99 46 56 chr20 19601478 19601782 -52552100 - AluSx SINE Alu -11 301 1 336 311 18 12 chr20 19602062 19602226 -52551656 - L1M4 LINE L1 -3527 2619 2455 4717 126 24 1 chr20 19602270 19602994 -52550888 + L1PA16 LINE L1 5419 6158 -8 24 0 0 0 chr20 19602994 19603018 -52550864 + AT_rich Low_complexity Low_complexity 1 24 0 236 186 17 0 chr20 19603115 19603174 -52550708 + (TA)n Simple_repeat Simple_repeat 1 60 0 207 0 0 0 chr20 19603806 19603829 -52550053 + (TAA)n Simple_repeat Simple_repeat 2 24 0 2737 190 55 35 chr20 19604833 19605173 -52548709 - L1MA6 LINE L1 0 6300 5922 251 28 28 0 chr20 19605173 19605209 -52548673 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 2737 190 55 35 chr20 19605209 19605286 -52548596 - L1MA6 LINE L1 -378 5922 5848 2243 199 8 73 chr20 19605286 19606353 -52547529 - L1MD3 LINE L1 -744 5402 4905 198 197 8 154 chr20 19606667 19606784 -52547098 - L2 LINE L2 -105 3208 3109 324 380 9 0 chr20 19607146 19607254 -52546628 - MIR SINE MIR -62 146 38 360 148 0 0 chr20 19607721 19607782 -52546100 + (GGAA)n Simple_repeat Simple_repeat 4 64 0 1047 253 23 10 chr20 19608227 19608527 -52545355 + L1M4 LINE L1 4050 4353 -1793 2771 242 37 6 chr20 19608670 19609326 -52544556 + MER76 LTR ERV 1 676 -12 1096 276 131 41 chr20 19609349 19610645 -52543237 + L1ME3A LINE L1 3878 5290 -856 553 293 86 21 chr20 19610844 19611124 -52542758 + L1ME3A LINE L1 5615 5912 -258 533 77 0 0 chr20 19611210 19611288 -52542594 + L1PA5 LINE L1 6077 6154 0 419 0 0 19 chr20 19611377 19611429 -52542453 + (TG)n Simple_repeat Simple_repeat 2 52 0 313 256 48 77 chr20 19612074 19612281 -52541601 + L1ME3A LINE L1 5970 6170 0 313 366 57 32 chr20 19612307 19612588 -52541294 - L2 LINE L2 -160 3112 2825 228 67 0 0 chr20 19614173 19614203 -52539679 + (CAAT)n Simple_repeat Simple_repeat 2 31 0 1419 299 76 50 chr20 19614225 19614724 -52539158 - L2 LINE L2 0 3313 2829 2236 95 3 33 chr20 19614724 19615030 -52538852 + AluSc SINE Alu 1 297 -12 1419 299 76 50 chr20 19615030 19615570 -52538312 - L2 LINE L2 -484 2829 2232 874 287 70 9 chr20 19615788 19616159 -52537723 + MLT1J2 LTR MaLR 1 407 -2 185 385 0 0 chr20 19616164 19616216 -52537666 - L2 LINE L2 -23 3249 3198 244 352 127 35 chr20 19616746 19617203 -52536679 + L2 LINE L2 2215 2713 -601 1998 105 70 18 chr20 19617794 19618136 -52535746 - L1MA3 LINE L1 -17 6288 5929 516 50 38 0 chr20 19618183 19618263 -52535619 + (TCCA)n Simple_repeat Simple_repeat 4 86 0 254 296 35 78 chr20 19618600 19618715 -52535167 + L2 LINE L2 3202 3311 -2 225 358 181 4 chr20 19618872 19619115 -52534767 + L2 LINE L2 2305 2590 -724 764 278 0 6 chr20 19619239 19619419 -52534463 + MER8 DNA MER2_type 1 179 -60 338 219 0 16 chr20 19619394 19619458 -52534424 + MER2 DNA MER2_type 282 344 -1 * 183 319 0 0 chr20 19619698 19619745 -52534137 + L2 LINE L2 3008 3054 -218 274 238 230 0 chr20 19619932 19620058 -52533824 - MIR SINE MIR -6 256 102 258 264 0 42 chr20 19620148 19620220 -52533662 + L2 LINE L2 3242 3310 -3 1909 142 7 0 chr20 19620862 19621136 -52532746 + AluSx SINE Alu 1 276 -36 225 0 0 0 chr20 19621143 19621168 -52532714 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 224 250 0 0 chr20 19622449 19622497 -52531385 + MIR SINE MIR 6 53 -209 2830 227 25 83 chr20 19622508 19623671 -52530211 + L1MC1 LINE L1 2893 3987 -2159 16774 210 24 12 chr20 19623907 19624067 -52529815 + L1PA15 LINE L1 1046 1203 -5613 2374 106 0 0 chr20 19624067 19624378 -52529504 + AluSq SINE Alu 1 311 -2 16774 210 24 12 chr20 19624378 19625995 -52527887 + L1PA15 LINE L1 1203 2800 -4016 2223 108 7 0 chr20 19625995 19626291 -52527591 + AluSq SINE Alu 1 298 -15 16774 210 24 12 chr20 19626291 19630151 -52523731 + L1PA15 LINE L1 2800 6764 -52 330 106 30 15 chr20 19630209 19630275 -52523607 + L1PA15 LINE L1 6746 6812 -4 22 0 0 0 chr20 19630275 19630297 -52523585 + AT_rich Low_complexity Low_complexity 1 22 0 6010 199 30 13 chr20 19630395 19631011 -52522871 + L1MC1 LINE L1 3999 4603 -1730 2486 77 0 0 chr20 19631011 19631322 -52522560 - AluY SINE Alu 0 311 1 6010 199 30 13 chr20 19631322 19632999 -52520883 + L1MC1 LINE L1 4603 6324 -9 1205 303 58 41 chr20 19633137 19634371 -52519511 + L1ME3A LINE L1 4888 6144 -26 364 273 159 11 chr20 19634473 19634649 -52519233 + L1ME4a LINE L1 5915 6116 -5 4498 141 4 1 chr20 19635726 19636464 -52517418 + L1MA6 LINE L1 5558 6297 -3 21 0 0 0 chr20 19636464 19636485 -52517397 + AT_rich Low_complexity Low_complexity 1 21 0 1833 107 118 0 chr20 19637841 19638113 -52515769 + AluSx SINE Alu 8 311 -1 627 246 120 20 chr20 19638221 19638568 -52515314 + L2 LINE L2 1718 2169 -1145 21 36 0 0 chr20 19639942 19639970 -52513912 + AT_rich Low_complexity Low_complexity 1 28 0 308 291 30 45 chr20 19640229 19640363 -52513519 + MIR SINE MIR 118 249 -13 181 164 0 33 chr20 19641261 19641322 -52512560 + (TA)n Simple_repeat Simple_repeat 1 59 0 477 50 0 0 chr20 19642090 19642150 -52511732 + (TG)n Simple_repeat Simple_repeat 2 61 0 2003 132 146 13 chr20 19642371 19642561 -52511321 + MSTA LTR MaLR 1 164 -264 204 40 0 0 chr20 19642561 19642586 -52511296 + (TC)n Simple_repeat Simple_repeat 1 25 0 2003 132 146 13 chr20 19642586 19642773 -52511109 + MSTA LTR MaLR 164 428 0 209 370 50 28 chr20 19643150 19643331 -52510551 + MIR SINE MIR 28 212 -50 699 210 176 0 chr20 19643780 19643956 -52509926 + MER58A DNA MER1_type 18 224 0 1584 130 26 39 chr20 19645801 19646108 -52507774 - L1M2 LINE L1 -693 5604 5302 * 1623 157 70 12 chr20 19646105 19646436 -52507446 + L1MA5 LINE L1 5926 6275 -25 1989 148 0 20 chr20 19646439 19646744 -52507138 - AluJo SINE Alu -13 299 1 1672 173 32 4 chr20 19647099 19647377 -52506505 - AluJo SINE Alu -24 288 3 811 178 13 26 chr20 19647378 19647530 -52506352 - AluJo SINE Alu -162 150 1 606 258 175 40 chr20 19647549 19647921 -52505961 + L2 LINE L2 2806 3227 -86 26 0 0 0 chr20 19647965 19647991 -52505891 + AT_rich Low_complexity Low_complexity 1 26 0 370 142 18 0 chr20 19648692 19648758 -52505124 - Tigger4(Zombi) DNA MER2_type 0 2731 270 229 179 0 0 chr20 19648735 19648774 -52505108 - Tigger4(Zombi) DNA MER2_type -2692 39 1 * 205 330 47 66 chr20 19648982 19649088 -52504794 + MIR3 SINE MIR 77 180 -28 228 302 56 24 chr20 19650234 19650360 -52503522 - L1ME LINE L1 -265 5856 5727 694 259 110 35 chr20 19650616 19650933 -52502949 + LTR16C LTR ERVL 149 489 -2 186 283 0 33 chr20 19650967 19651027 -52502855 - MIR SINE MIR -131 77 20 1999 118 0 17 chr20 19651562 19651875 -52502007 + AluSg SINE Alu 1 308 0 1265 211 60 52 chr20 19652372 19652736 -52501146 - MLT1A2 LTR MaLR -7 367 1 834 252 45 36 chr20 19654085 19654418 -52499464 - L1ME3A LINE L1 0 6170 5835 902 221 0 31 chr20 19654574 19654769 -52499113 - MER5A DNA MER1_type 0 189 1 972 135 45 141 chr20 19655243 19655414 -52498468 + MER33 DNA MER1_type 4 125 -2460 1175 83 0 0 chr20 19655414 19655571 -52498311 - L1PA11 LINE L1 0 6174 6018 972 135 45 141 chr20 19655571 19655754 -52498128 + MER33 DNA MER1_type 125 324 0 529 310 60 11 chr20 19656414 19656598 -52497284 + MIR SINE MIR 64 256 -6 188 294 185 17 chr20 19656636 19656755 -52497127 + L2 LINE L2 3165 3303 -10 323 355 24 8 chr20 19656770 19656894 -52496988 - L2 LINE L2 -10 3262 3137 3103 123 14 4 chr20 19657885 19658395 -52495487 - L1MA5A LINE L1 -4 6293 5779 289 180 0 0 chr20 19658469 19658519 -52495363 - 5S rRNA rRNA -70 51 2 2137 110 75 23 chr20 19659129 19659475 -52494407 - THE1B LTR MaLR 0 364 1 405 0 0 0 chr20 19660042 19660087 -52493795 + (TG)n Simple_repeat Simple_repeat 2 46 0 315 264 57 21 chr20 19660501 19660641 -52493241 - MER103 DNA DNA -21 145 1 229 171 0 0 chr20 19661182 19661217 -52492665 + MER5A DNA MER1_type 155 189 0 564 248 52 13 chr20 19662130 19662283 -52491599 - MIR SINE MIR -24 238 80 363 96 0 0 chr20 19662959 19663011 -52490871 + (T)n Simple_repeat Simple_repeat 1 52 0 2276 55 62 0 chr20 19663011 19663318 -52490564 - LTR17 LTR ERV1 -454 326 1 1202 47 0 0 chr20 19663318 19663466 -52490416 - HERV17 LTR ERV1 0 8626 8479 226 275 35 120 chr20 19663684 19663733 -52490149 - L2 LINE L2 -5 3308 3256 4026 192 24 54 chr20 19663733 19664717 -52489165 + LTR5 LTR ERVK 1 955 -14 226 275 35 120 chr20 19664717 19664809 -52489073 - L2 LINE L2 -57 3256 3179 207 244 0 0 chr20 19665020 19665065 -52488817 + GA-rich Low_complexity Low_complexity 3 47 0 370 261 101 36 chr20 19665545 19665683 -52488199 + MIR SINE MIR 8 154 -108 613 295 57 16 chr20 19665765 19666080 -52487802 + L1MC4a LINE L1 5532 5859 -1949 567 294 34 42 chr20 19666167 19666429 -52487453 - MIR SINE MIR 0 262 3 243 203 0 51 chr20 19666555 19666634 -52487248 + L1ME4a LINE L1 5989 6063 -58 259 252 94 31 chr20 19666987 19667146 -52486736 + L1ME4a LINE L1 5949 6117 -4 643 268 12 36 chr20 19667198 19667448 -52486434 + L1ME4a LINE L1 5637 5880 -241 35 78 0 0 chr20 19667531 19667608 -52486274 + AT_rich Low_complexity Low_complexity 1 77 0 12095 138 54 14 chr20 19670667 19670999 -52482883 - Tigger1 DNA MER2_type -151 2267 1950 1907 139 10 17 chr20 19670999 19671300 -52482582 + AluSq SINE Alu 1 299 -14 12095 138 54 14 chr20 19671300 19673145 -52480737 - Tigger1 DNA MER2_type -468 1950 2 258 105 0 0 chr20 19673625 19673663 -52480219 + (TA)n Simple_repeat Simple_repeat 1 38 0 183 156 0 0 chr20 19674704 19674736 -52479146 + (TA)n Simple_repeat Simple_repeat 2 33 0 272 118 10 59 chr20 19674870 19674972 -52478910 + (TA)n Simple_repeat Simple_repeat 2 98 0 222 239 15 0 chr20 19674994 19675061 -52478821 + (TA)n Simple_repeat Simple_repeat 2 69 0 324 196 12 42 chr20 19675081 19675249 -52478633 + (TA)n Simple_repeat Simple_repeat 1 163 0 653 324 92 20 chr20 19675424 19675717 -52478165 + L2 LINE L2 2992 3305 -8 312 296 0 0 chr20 19676292 19676363 -52477519 + (CGTG)n Simple_repeat Simple_repeat 1 71 0 1997 116 32 4 chr20 19676403 19676728 -52477154 + AluSx SINE Alu 1 333 0 563 268 54 17 chr20 19678938 19679353 -52474529 + MLT1H1 LTR MaLR 5 470 -85 1779 157 3 20 chr20 19679733 19680033 -52473849 - AluJo SINE Alu -17 295 1 327 195 7 162 chr20 19682239 19682393 -52471489 + MLT1H1 LTR MaLR 420 549 0 554 286 84 25 chr20 19682663 19682866 -52471016 - MIR SINE MIR 0 262 48 924 206 105 49 chr20 19683151 19683437 -52470445 - L1MC4 LINE L1 -140 7902 7601 210 143 0 0 chr20 19683534 19683569 -52470313 + (GGAA)n Simple_repeat Simple_repeat 4 38 0 421 221 57 49 chr20 19683866 19683988 -52469894 - MIR SINE MIR -67 141 19 219 304 109 0 chr20 19684040 19684132 -52469750 + L2 LINE L2 3199 3300 -13 901 285 115 57 chr20 19684374 19685043 -52468839 + L2 LINE L2 2580 3312 -1 215 342 13 13 chr20 19686148 19686224 -52467658 - MIR SINE MIR -94 114 39 594 237 112 12 chr20 19687715 19687884 -52465998 - MER5A DNA MER1_type -3 186 1 2804 65 8 0 chr20 19687885 19688237 -52465645 + THE1A LTR MaLR 1 355 0 227 321 25 0 chr20 19688511 19688592 -52465290 - L2 LINE L2 0 3313 3231 1120 199 60 35 chr20 19688835 19689151 -52464731 + MER33 DNA MER1_type 1 324 0 1099 269 46 19 chr20 19689304 19689672 -52464210 + LTR16C LTR ERVL 102 479 -12 280 345 23 89 chr20 19689740 19689998 -52463884 - L2 LINE L2 -161 3111 2871 187 400 40 0 chr20 19690552 19690677 -52463205 - MIR SINE MIR -82 180 51 2129 123 3 3 chr20 19691637 19691939 -52461943 - AluSg SINE Alu -8 302 1 781 177 188 0 chr20 19694313 19694494 -52459388 + MER58C DNA MER1_type 1 215 0 1014 233 32 45 chr20 19694859 19695173 -52458709 + MLT1F1 LTR MaLR 3 312 -255 2402 232 30 77 chr20 19695936 19696791 -52457091 + MER21B LTR ERV1 1 815 -48 291 321 9 9 chr20 19696819 19696925 -52456957 - MIR SINE MIR -40 222 117 187 213 0 115 chr20 19697487 19697548 -52456334 - L2 LINE L2 0 3272 3219 183 80 0 0 chr20 19698217 19698242 -52455640 + (TAA)n Simple_repeat Simple_repeat 2 26 0 362 229 280 25 chr20 19698350 19698468 -52455414 - MIR SINE MIR -113 149 2 22 0 0 0 chr20 19698560 19698582 -52455300 + AT_rich Low_complexity Low_complexity 1 22 0 1192 121 0 0 chr20 19699357 19699531 -52454351 - AluSp SINE Alu 0 313 140 507 309 95 75 chr20 19700090 19700491 -52453391 + MLT1K LTR MaLR 31 439 -149 210 228 35 0 chr20 19700625 19700682 -52453200 - MER5B DNA MER1_type -2 176 118 333 0 0 0 chr20 19700962 19700999 -52452883 + (CA)n Simple_repeat Simple_repeat 2 38 0 2786 16 0 0 chr20 19701571 19701878 -52452004 + AluYa5 SINE Alu 1 307 -4 775 248 149 78 chr20 19701916 19702432 -52451450 + MLT1G1 LTR MaLR 6 558 -37 772 267 121 23 chr20 19702852 19703200 -52450682 - LTR33 LTR ERVL -6 515 134 750 189 11 23 chr20 19703276 19703451 -52450431 + MER106A DNA MER1_type 63 235 -1 415 247 11 0 chr20 19704183 19704276 -52449606 + L1MC4a LINE L1 6676 6769 -1039 264 221 0 0 chr20 19704279 19704347 -52449535 + L1MC4 LINE L1 7022 7089 -953 2136 255 29 14 chr20 19704351 19705005 -52448877 + L1MC4 LINE L1 7238 7901 -141 290 238 24 12 chr20 19706141 19706225 -52447657 + MIR3 SINE MIR 123 207 -1 2290 71 37 0 chr20 19706436 19706780 -52447102 - AluY SINE Alu 0 355 1 966 106 0 0 chr20 19707072 19707204 -52446678 + FLAM_C SINE Alu 1 132 -1 1280 268 80 58 chr20 19707409 19707729 -52446153 + L2 LINE L2 2459 2770 -543 697 211 63 6 chr20 19707729 19707904 -52445978 + MER5A DNA MER1_type 1 185 -4 1280 268 80 58 chr20 19707904 19708062 -52445820 + L2 LINE L2 2770 2940 -373 1297 106 247 0 chr20 19708062 19708297 -52445585 - AluSx SINE Alu -9 293 1 1280 268 80 58 chr20 19708297 19708408 -52445474 + L2 LINE L2 2940 3047 -266 1173 216 59 4 chr20 19708545 19708818 -52445064 - MLT1F LTR MaLR -133 409 122 443 246 45 0 chr20 19708815 19708949 -52444933 + MLT1F1 LTR MaLR 425 564 -3 * 244 281 7 126 chr20 19709045 19709180 -52444702 + L2 LINE L2 3192 3310 -3 317 250 0 36 chr20 19709332 19709416 -52444466 - Charlie1 DNA MER1_type -2679 82 2 1411 191 107 21 chr20 19709710 19710093 -52443789 - MER47B DNA MER2_type -2 416 1 217 381 48 0 chr20 19710440 19710566 -52443316 - MIR SINE MIR -41 221 90 326 264 47 23 chr20 19710635 19710764 -52443118 + MER94 DNA DNA 2 133 -1 33 43 0 0 chr20 19711447 19711494 -52442388 + AT_rich Low_complexity Low_complexity 1 47 0 302 240 0 80 chr20 19712032 19712132 -52441750 - L1MC4 LINE L1 -1336 6706 6615 185 281 0 9 chr20 19712140 19712254 -52441628 + (CATA)n Simple_repeat Simple_repeat 3 115 0 313 303 11 0 chr20 19712264 19712353 -52441529 + L1MC4 LINE L1 6614 6703 -1339 393 220 6 39 chr20 19712355 19712537 -52441345 + (TA)n Simple_repeat Simple_repeat 2 177 0 610 211 143 6 chr20 19712708 19712816 -52441066 - MER5A DNA MER1_type -5 184 46 2236 95 0 3 chr20 19712816 19713110 -52440772 - AluSx SINE Alu -5 307 15 610 211 143 6 chr20 19713110 19713162 -52440720 - MER5A DNA MER1_type -143 46 2 265 287 98 0 chr20 19713475 19713649 -52440233 + L1MEd LINE L1 660 850 -5269 477 292 115 19 chr20 19713670 19714259 -52439623 + L1MEd LINE L1 895 1588 -4722 1253 199 12 4 chr20 19715472 19715878 -52438004 + LTR32 LTR ERVL 15 471 0 314 275 179 60 chr20 19717252 19717503 -52436379 + LTR16B LTR ERVL 34 314 -150 240 86 0 0 chr20 19717698 19717733 -52436149 + U2 snRNA snRNA 1 35 -153 249 346 0 0 chr20 19719107 19719188 -52434694 + L2 LINE L2 2237 2317 -997 481 143 61 10 chr20 19719195 19719293 -52434589 + LTR33 LTR ERVL 6 108 -413 235 272 88 35 chr20 19719358 19719472 -52434410 + LTR33 LTR ERVL 235 354 -167 1090 308 99 37 chr20 19719569 19720454 -52433428 + L2 LINE L2 2325 3269 -44 422 281 261 10 chr20 19721899 19722098 -52431784 + MIR SINE MIR 8 256 -6 506 273 76 15 chr20 19722101 19722299 -52431583 - MER63A DNA MER1_type 0 210 1 725 288 123 19 chr20 19723213 19723414 -52430468 - LTR16C LTR ERVL 0 491 246 1405 153 41 47 chr20 19723414 19723734 -52430148 + MER33 DNA MER1_type 3 320 -4 725 288 123 19 chr20 19723734 19723841 -52430041 - LTR16C LTR ERVL -245 246 151 348 335 171 25 chr20 19724066 19724382 -52429500 + L3 LINE CR1 1192 1553 -24 366 268 153 20 chr20 19724479 19724679 -52429203 - MIR SINE MIR -3 259 38 691 311 93 18 chr20 19724824 19725212 -52428670 + MLT1G3 LTR MaLR 1 427 -168 2075 164 19 6 chr20 19726299 19726659 -52427223 + MLT1A1 LTR MaLR 1 365 0 762 265 25 49 chr20 19727204 19727449 -52426433 + MIR SINE MIR 24 262 0 190 382 114 24 chr20 19727494 19727617 -52426265 + L2 LINE L2 3134 3267 -5 21 0 0 0 chr20 19728075 19728096 -52425786 + AT_rich Low_complexity Low_complexity 1 21 0 183 356 0 46 chr20 19728230 19728317 -52425565 - L2 LINE L2 -2 3311 3229 198 91 0 0 chr20 19728327 19728360 -52425522 + (T)n Simple_repeat Simple_repeat 1 33 0 247 290 11 54 chr20 19728633 19728726 -52425156 + MIR SINE MIR 11 99 -163 2150 221 58 9 chr20 19728761 19729296 -52424586 + LTR48B LTR ERV1 80 640 -4 401 176 267 15 chr20 19729296 19729427 -52424455 + MIR SINE MIR 96 259 -3 2553 175 45 111 chr20 19729435 19730213 -52423669 + LTR8A LTR ERV1 1 727 0 299 346 16 85 chr20 19730303 19730529 -52423353 - L2 LINE L2 -91 3181 2980 1197 250 70 62 chr20 19730529 19731013 -52422869 + LTR16C LTR ERVL 4 491 0 299 346 16 85 chr20 19731013 19731092 -52422790 - L2 LINE L2 -292 2980 2897 1615 217 45 75 chr20 19731190 19731725 -52422157 + MLT2B1 LTR ERVL 2 520 0 735 221 147 0 chr20 19732872 19733035 -52420847 + MER5A DNA MER1_type 3 189 0 312 307 99 36 chr20 19734036 19734228 -52419654 - L2 LINE L2 -864 2450 2247 6360 56 11 1 chr20 19734452 19735267 -52418615 + L1PA5 LINE L1 5326 6148 -6 321 89 0 0 chr20 19735267 19735312 -52418570 + (TA)n Simple_repeat Simple_repeat 1 45 0 1675 193 49 65 chr20 19736155 19736667 -52417215 - MLT1D LTR MaLR -1 504 1 6132 60 3 1 chr20 19736711 19737488 -52416394 + L1PA6 LINE L1 5377 6154 0 240 184 0 0 chr20 19737673 19737722 -52416160 + CT-rich Low_complexity Low_complexity 3 51 0 315 296 71 18 chr20 19737776 19738114 -52415768 + L1ME4a LINE L1 5188 5309 -837 440 240 153 63 chr20 19738225 19738525 -52415357 + L1ME4a LINE L1 5573 5899 -222 290 256 12 12 chr20 19738850 19738932 -52414950 - MIR SINE MIR -123 139 58 239 270 63 56 chr20 19739352 19739478 -52414404 + MIR SINE MIR 56 182 -80 192 208 113 38 chr20 19739914 19739967 -52413915 + L2 LINE L2 3243 3299 -14 2331 101 3 0 chr20 19740210 19740508 -52413374 - AluSg SINE Alu -11 299 1 1167 212 166 14 chr20 19740635 19740979 -52412903 - MSTD LTR MaLR 0 396 1 306 0 0 0 chr20 19741138 19741172 -52412710 + (TAA)n Simple_repeat Simple_repeat 2 35 0 29 47 0 0 chr20 19741970 19742013 -52411869 + AT_rich Low_complexity Low_complexity 1 43 0 252 0 0 0 chr20 19742139 19742167 -52411715 + (TC)n Simple_repeat Simple_repeat 2 29 0 207 0 0 0 chr20 19742166 19742189 -52411693 + (TA)n Simple_repeat Simple_repeat 2 24 0 * 1514 194 0 63 chr20 19742308 19742627 -52411255 + AluJo SINE Alu 1 299 -13 929 150 52 56 chr20 19743304 19743517 -52410365 - MER20 DNA MER1_type -7 212 1 1900 199 16 0 chr20 19744089 19744471 -52409411 + MLT1B LTR MaLR 3 390 0 308 87 0 0 chr20 19744890 19744936 -52408946 - MER73 LTR ERVL 0 644 599 1398 186 87 36 chr20 19744973 19745272 -52408610 - AluJo SINE Alu 0 313 1 3040 171 27 13 chr20 19745273 19745875 -52408007 - MER73 LTR ERVL -34 610 1 231 271 34 34 chr20 19745877 19745995 -52407887 + MIR SINE MIR 143 260 -2 219 196 11 65 chr20 19746001 19746093 -52407789 + (TTA)n Simple_repeat Simple_repeat 2 88 0 188 146 0 62 chr20 19747304 19747352 -52406530 + (GGAGAA)n Simple_repeat Simple_repeat 3 47 0 326 289 53 59 chr20 19748253 19748440 -52405442 - MIR3 SINE MIR 0 208 23 222 37 0 0 chr20 19748821 19748848 -52405034 + (TG)n Simple_repeat Simple_repeat 2 28 0 253 242 0 22 chr20 19750119 19750211 -52403671 + L1ME2 LINE L1 5848 5939 -231 1818 167 53 0 chr20 19750249 19750590 -52403292 + MER93b LTR ERV1 1 359 -14 21 57 0 0 chr20 19750772 19750807 -52403075 + AT_rich Low_complexity Low_complexity 1 35 0 265 232 0 0 chr20 19751148 19751204 -52402678 + (TG)n Simple_repeat Simple_repeat 1 56 0 1878 115 0 0 chr20 19751241 19751502 -52402380 - AluY SINE Alu -6 305 45 379 260 29 10 chr20 19751915 19752019 -52401863 + MLT1G1 LTR MaLR 1 106 -489 424 174 0 0 chr20 19752019 19752088 -52401794 + Tigger2 DNA MER2_type 1 69 -2649 * 2619 117 33 2 chr20 19752086 19752512 -52401370 + Tigger2 DNA MER2_type 2280 2718 0 380 248 106 10 chr20 19752520 19752656 -52401226 + MLT1G1 LTR MaLR 75 278 -317 342 207 171 0 chr20 19753359 19753441 -52400441 - FLAM_A SINE Alu -15 118 23 239 346 70 12 chr20 19753502 19753665 -52400217 + MIR3 SINE MIR 33 203 -5 708 283 95 39 chr20 19753704 19754188 -52399694 + MLT2F LTR ERVL 60 570 -93 519 266 40 6 chr20 19754176 19754353 -52399529 + MLT2E LTR ERVL 443 625 -3 * 300 258 0 0 chr20 19754737 19754799 -52399083 + L2 LINE L2 3194 3255 -17 2313 236 46 28 chr20 19755218 19755871 -52398011 + L1ME3A LINE L1 5501 6165 -5 1327 247 88 88 chr20 19756752 19757399 -52396483 - MLT1E3 LTR MaLR -6 618 2 454 241 65 0 chr20 19757412 19757520 -52396362 + MIR SINE MIR 34 148 -114 2015 211 82 24 chr20 19757534 19758084 -52395798 - MLT1E3 LTR MaLR -41 583 2 215 276 35 0 chr20 19758113 19758171 -52395711 + MIR SINE MIR 197 256 -6 213 39 0 0 chr20 19758360 19758386 -52395496 + (TTA)n Simple_repeat Simple_repeat 2 27 0 1089 191 0 25 chr20 19758389 19758593 -52395289 - AluJo SINE Alu -30 282 84 637 268 69 50 chr20 19759484 19759717 -52394165 + LTR16A LTR ERVL 16 262 -188 2204 172 8 5 chr20 19759717 19760106 -52393776 + MLT1B LTR MaLR 1 390 0 637 268 69 50 chr20 19760106 19760293 -52393589 + LTR16A LTR ERVL 262 444 -6 409 271 169 27 chr20 19760961 19761186 -52392696 + LTR16C LTR ERVL 77 333 -158 398 169 0 0 chr20 19761236 19761301 -52392581 + LTR16C LTR ERVL 425 489 -2 195 100 0 0 chr20 19762240 19762270 -52391612 + (TG)n Simple_repeat Simple_repeat 1 30 0 222 37 0 0 chr20 19763178 19763205 -52390677 + (GA)n Simple_repeat Simple_repeat 1 27 0 224 250 0 26 chr20 19763509 19763585 -52390297 + A-rich Low_complexity Low_complexity 4 77 0 299 311 98 30 chr20 19765493 19765657 -52388225 + MIR SINE MIR 88 262 0 199 341 54 23 chr20 19765945 19766074 -52387808 - MER5A DNA MER1_type -3 186 54 584 204 102 13 chr20 19766127 19766284 -52387598 - MLT1C LTR MaLR -291 176 6 583 321 77 9 chr20 19766760 19766981 -52386901 + MIR SINE MIR 19 254 -8 190 343 30 75 chr20 19768272 19768406 -52385476 - MIR3 SINE MIR -77 131 4 357 109 0 0 chr20 19768604 19768659 -52385223 + (TCTA)n Simple_repeat Simple_repeat 3 57 0 2498 148 31 9 chr20 19769633 19770052 -52383830 + MSTA LTR MaLR 1 428 0 586 287 15 26 chr20 19771306 19771501 -52382381 - MIR SINE MIR 0 262 70 284 316 14 22 chr20 19771863 19772002 -52381880 - MLT1H LTR MaLR -304 245 108 201 283 19 0 chr20 19772101 19772154 -52381728 - MIR SINE MIR -206 56 3 21 57 0 0 chr20 19774749 19774784 -52379098 + AT_rich Low_complexity Low_complexity 1 35 0 291 284 39 10 chr20 19775451 19775553 -52378329 - MIR SINE MIR -36 226 122 320 251 66 3 chr20 19775595 19775694 -52378188 + MIR SINE MIR 48 154 -62 21 95 0 0 chr20 19775710 19775773 -52378109 + AT_rich Low_complexity Low_complexity 1 63 0 1136 269 60 21 chr20 19776053 19776562 -52377320 - MLT1F LTR MaLR 0 567 1 1153 110 0 0 chr20 19776997 19777183 -52376699 - AluSg/x SINE Alu 0 313 128 273 306 75 17 chr20 19777282 19777455 -52376427 - MIR3 SINE MIR -3 205 23 197 291 35 23 chr20 19778526 19778612 -52375270 - MER5B DNA MER1_type -4 174 88 382 322 89 8 chr20 19778779 19779015 -52374867 + LTR33A LTR ERVL 163 417 -106 1334 141 47 0 chr20 19783098 19783354 -52370528 - L1MA7 LINE L1 0 6291 6024 222 371 40 33 chr20 19785268 19785419 -52368463 + L3 LINE CR1 1378 1529 -48 743 129 0 0 chr20 19785764 19785880 -52368002 + AluY SINE Alu 195 310 -1 432 267 132 7 chr20 19785954 19786234 -52367648 - MLT1H1 LTR MaLR -253 330 7 256 257 114 9 chr20 19786484 19786589 -52367293 - L2 LINE L2 -1 3271 3156 222 128 0 0 chr20 19787071 19787110 -52366772 + (CA)n Simple_repeat Simple_repeat 2 40 0 414 0 0 0 chr20 19788046 19788092 -52365790 + (CA)n Simple_repeat Simple_repeat 2 47 0 1718 161 58 15 chr20 19789478 19789808 -52364074 + MER2 DNA MER2_type 1 344 0 35 24 0 0 chr20 19789961 19790003 -52363879 + AT_rich Low_complexity Low_complexity 1 42 0 339 222 148 0 chr20 19790225 19790333 -52363549 + L1M4 LINE L1 5138 5261 -885 1839 146 18 4 chr20 19790878 19791152 -52362730 + AluJb SINE Alu 3 280 -32 1722 227 33 14 chr20 19791327 19791811 -52362071 - L1MA9 LINE L1 -38 6274 5782 593 163 9 14 chr20 19791814 19792174 -52361708 + (TA)n Simple_repeat Simple_repeat 1 357 0 794 218 24 0 chr20 19792180 19792350 -52361532 - L1MA9 LINE L1 -527 5785 5612 192 256 0 0 chr20 19792357 19792400 -52361482 + MIR SINE MIR 46 88 -174 194 310 115 118 chr20 19792418 19792632 -52361250 - L2 LINE L2 -1 3271 3057 3988 148 0 2 chr20 19792632 19793266 -52360616 + MER41B LTR ERV1 3 635 0 194 310 115 118 chr20 19793266 19793451 -52360431 - L2 LINE L2 -215 3057 2873 212 215 0 31 chr20 19795294 19795359 -52358523 + (CAGAGA)n Simple_repeat Simple_repeat 4 66 0 213 235 20 20 chr20 19796472 19796523 -52357359 - L2 LINE L2 -5 3267 3217 995 275 63 57 chr20 19796732 19797220 -52356662 - LTR16C LTR ERVL 0 491 1 209 281 18 0 chr20 19797244 19797301 -52356581 + CT-rich Low_complexity Low_complexity 3 60 0 1813 169 0 14 chr20 19797582 19797872 -52356010 - AluJo SINE Alu -26 286 1 195 315 0 19 chr20 19799115 19799169 -52354713 - L2 LINE L2 -4 3268 3216 202 384 122 22 chr20 19799356 19799627 -52354255 + L2 LINE L2 2808 3105 -167 6731 23 0 3 chr20 19799919 19800856 -52353026 - L1PA4 LINE L1 -653 5502 4567 5622 23 0 0 chr20 19800856 19801504 -52352378 + L1PA4 LINE L1 5507 6155 0 6731 23 0 3 chr20 19801504 19801519 -52352363 - L1P1 LINE L1 -1588 4567 4553 2294 181 19 7 chr20 19801610 19802035 -52351847 + MSTB1 LTR MaLR 1 430 -2 428 298 71 53 chr20 19802060 19802285 -52351597 - L2 LINE L2 -422 2892 2664 1572 187 114 26 chr20 19803112 19803534 -52350348 - LTR2B LTR ERV1 0 490 32 1096 203 62 3 chr20 19803576 19803882 -52350000 - MER33 DNA MER1_type 0 324 1 2439 80 3 0 chr20 19805592 19805892 -52347990 + AluSp SINE Alu 1 301 -12 1199 292 51 22 chr20 19806205 19806616 -52347266 - LTR16C LTR ERVL 0 491 69 2984 191 24 20 chr20 19808071 19808815 -52345067 - L1 LINE L1 -2365 3781 3035 * 5123 179 20 5 chr20 19808801 19809873 -52344009 + L1 LINE L1 3773 4860 -1286 5712 23 0 0 chr20 19810163 19810778 -52343104 - SVA Other Other -1 1385 771 2191 169 24 11 chr20 19810778 19811240 -52342642 + L1 LINE L1 4845 5312 -834 627 243 147 39 chr20 19813812 19814336 -52339546 - MLT1G LTR MaLR -2 588 1 534 212 53 71 chr20 19814459 19814506 -52339376 - MER63A DNA MER1_type -1478 210 164 2315 120 0 0 chr20 19814506 19814805 -52339077 - AluSx SINE Alu -13 299 1 534 212 53 71 chr20 19814805 19814944 -52338938 - MER63A DNA MER1_type -1524 164 26 24 0 0 0 chr20 19815115 19815139 -52338743 + AT_rich Low_complexity Low_complexity 1 24 0 2063 62 0 0 chr20 19815152 19815395 -52338487 + AluY SINE Alu 53 295 -16 910 188 0 0 chr20 19815395 19815539 -52338343 - FRAM SINE Alu -32 144 1 251 337 0 23 chr20 19815545 19815631 -52338251 + MIR SINE MIR 26 109 -153 2160 101 7 0 chr20 19815685 19815971 -52337911 - AluSc SINE Alu -21 288 1 396 0 0 0 chr20 19816054 19816098 -52337784 + (TTGG)n Simple_repeat Simple_repeat 2 45 0 440 48 16 0 chr20 19818979 19819042 -52334840 + (CA)n Simple_repeat Simple_repeat 2 65 0 184 284 95 77 chr20 19819349 19819634 -52334248 + L2 LINE L2 2933 3222 -91 * 321 244 259 7 chr20 19819610 19819745 -52334137 + MER5A DNA MER1_type 15 183 -6 539 181 245 0 chr20 19819775 19819930 -52333952 - MER3 DNA MER1_type -8 201 9 644 271 133 52 chr20 19820454 19820639 -52333243 - MLT1K LTR MaLR -25 563 394 2421 98 49 9 chr20 19820639 19820987 -52332895 - THE1B LTR MaLR -2 362 1 644 271 133 52 chr20 19820987 19821321 -52332561 - MLT1K LTR MaLR -194 394 2 204 40 0 0 chr20 19821345 19821370 -52332512 + (TGAA)n Simple_repeat Simple_repeat 3 27 0 378 0 0 0 chr20 19821376 19821418 -52332464 + (TG)n Simple_repeat Simple_repeat 2 43 0 546 259 180 53 chr20 19822328 19822800 -52331082 + MLT1H LTR MaLR 18 549 0 192 299 122 56 chr20 19822852 19822959 -52330923 - MIR SINE MIR -76 132 19 671 219 110 0 chr20 19823710 19823874 -52330008 + MIR SINE MIR 71 252 -10 248 265 73 0 chr20 19824657 19824725 -52329157 + MIR3 SINE MIR 115 187 -21 330 233 75 8 chr20 19824847 19824967 -52328915 + L1MC4 LINE L1 7095 7222 -820 6840 141 79 19 chr20 19875065 19875977 -52277905 + Tigger1 DNA MER2_type 948 1956 -462 1885 139 10 17 chr20 19875977 19876278 -52277604 - AluSq SINE Alu -14 299 1 6840 141 79 19 chr20 19876278 19876610 -52277272 + Tigger1 DNA MER2_type 1956 2267 -151 35 78 0 0 chr20 19879669 19879746 -52274136 + AT_rich Low_complexity Low_complexity 1 77 0 709 273 14 42 chr20 19879829 19880118 -52273764 - L1ME4a LINE L1 -241 5880 5600 298 252 94 31 chr20 19880131 19880290 -52273592 - L1ME4a LINE L1 -4 6117 5949 264 203 0 51 chr20 19880643 19880722 -52273160 - L1ME4a LINE L1 -58 6063 5989 572 294 34 42 chr20 19880848 19881110 -52272772 + MIR SINE MIR 3 262 0 701 295 57 16 chr20 19881197 19881512 -52272370 - L1MC4a LINE L1 -1949 5859 5532 367 261 101 36 chr20 19881594 19881732 -52272150 - MIR SINE MIR -108 154 8 207 244 0 0 chr20 19882212 19882257 -52271625 + CT-rich Low_complexity Low_complexity 3 47 0 223 275 35 120 chr20 19882468 19882560 -52271322 + L2 LINE L2 3179 3256 -57 3871 190 25 55 chr20 19882560 19883544 -52270338 - LTR5 LTR ERVK -14 955 1 223 275 35 120 chr20 19883544 19883593 -52270289 + L2 LINE L2 3256 3308 -5 1257 63 19 0 chr20 19883801 19883959 -52269923 + HERV17 LTR ERV1 8466 8626 0 2394 55 62 0 chr20 19883959 19884266 -52269616 + LTR17 LTR ERV1 1 326 -454 354 98 0 0 chr20 19884266 19884317 -52269565 + (A)n Simple_repeat Simple_repeat 1 51 0 568 248 52 13 chr20 19884993 19885146 -52268736 + MIR SINE MIR 80 238 -24 228 171 0 0 chr20 19886059 19886094 -52267788 - MER5A DNA MER1_type 0 189 155 352 264 57 21 chr20 19886635 19886775 -52267107 + MER103 DNA DNA 1 145 -21 405 0 0 0 chr20 19887189 19887234 -52266648 + (CA)n Simple_repeat Simple_repeat 2 46 0 2126 116 72 20 chr20 19887801 19888147 -52265735 + THE1B LTR MaLR 1 364 0 307 180 0 0 chr20 19888757 19888807 -52265075 + 5S rRNA rRNA 2 51 -70 3132 123 14 4 chr20 19888881 19889391 -52264491 + L1MA5A LINE L1 5779 6293 -4 325 355 24 8 chr20 19890382 19890506 -52263376 + L2 LINE L2 3137 3262 -10 195 294 185 17 chr20 19890521 19890640 -52263242 - L2 LINE L2 -10 3303 3165 529 310 60 11 chr20 19890678 19890862 -52263020 - MIR SINE MIR -6 256 64 1063 135 45 141 chr20 19891522 19891705 -52262177 - MER33 DNA MER1_type -2261 324 190 1176 83 0 0 chr20 19891705 19891862 -52262020 + L1PA11 LINE L1 6018 6174 0 1063 135 45 141 chr20 19891862 19892033 -52261849 - MER33 DNA MER1_type -2395 190 4 884 221 0 31 chr20 19892507 19892702 -52261180 + MER5A DNA MER1_type 1 189 0 920 252 45 36 chr20 19892858 19893191 -52260691 + L1ME3A LINE L1 5835 6170 0 1377 211 60 52 chr20 19894540 19894904 -52258978 + MLT1A2 LTR MaLR 1 367 -7 1990 118 0 17 chr20 19895401 19895714 -52258168 - AluSg SINE Alu 0 308 1 184 283 0 33 chr20 19896249 19896309 -52257573 + MIR SINE MIR 20 77 -131 766 239 113 73 chr20 19896343 19896741 -52257141 - LTR16C LTR ERVL -2 489 76 228 302 56 24 chr20 19896916 19897042 -52256840 + L1ME LINE L1 5727 5856 -265 205 330 47 66 chr20 19898188 19898294 -52255588 - MIR3 SINE MIR -28 180 77 229 179 0 0 chr20 19898502 19898541 -52255341 + Tigger4(Zombi) DNA MER2_type 1 39 -2692 * 370 142 18 0 chr20 19898518 19898584 -52255298 + Tigger4(Zombi) DNA MER2_type 270 2731 0 357 309 83 30 chr20 19899282 19899547 -52254335 + MARNA DNA Mariner 177 455 -131 1920 166 42 28 chr20 19900108 19900464 -52253418 - MLT1A1 LTR MaLR 0 365 5 603 242 38 6 chr20 19900928 19901085 -52252797 + MER104 DNA Tc2 15 176 -4 26 30 0 0 chr20 19901464 19901497 -52252385 + AT_rich Low_complexity Low_complexity 1 33 0 505 211 15 75 chr20 19902261 19902345 -52251537 + L2 LINE L2 3187 3262 -51 1497 219 3 0 chr20 19902345 19902628 -52251254 + AluJo SINE Alu 4 287 -25 505 211 15 75 chr20 19902628 19902676 -52251206 + L2 LINE L2 3262 3311 -2 180 0 0 0 chr20 19903564 19903584 -52250298 + (A)n Simple_repeat Simple_repeat 1 20 0 433 371 84 33 chr20 19903833 19904380 -52249502 + HAL1 LINE L1 1188 1762 -745 21 0 0 0 chr20 19904724 19904745 -52249137 + AT_rich Low_complexity Low_complexity 1 21 0 236 322 0 0 chr20 19904764 19904851 -52249031 + A-rich Low_complexity Low_complexity 1 87 0 267 286 54 12 chr20 19904924 19905092 -52248790 + (CGAAA)n Simple_repeat Simple_repeat 3 177 0 415 262 0 0 chr20 19905265 19905368 -52248514 + MLT1G1 LTR MaLR 481 583 -12 213 273 0 23 chr20 19906258 19906302 -52247580 + MER5A DNA MER1_type 17 59 -130 946 221 0 0 chr20 19906374 19906546 -52247336 + MER5A DNA MER1_type 17 188 -1 594 196 152 0 chr20 19906558 19906696 -52247186 + MER5B DNA MER1_type 16 174 -4 307 140 0 70 chr20 19906714 19906771 -52247111 + MER5A DNA MER1_type 7 59 -130 398 253 253 27 chr20 19909617 19909878 -52244004 + MLT1L LTR MaLR 215 534 -81 220 300 33 0 chr20 19909882 19909972 -52243910 - L2 LINE L2 0 3313 3221 840 323 86 49 chr20 19910154 19911377 -52242505 + L2 LINE L2 1932 3247 -25 460 271 60 57 chr20 19911602 19912056 -52241826 + L1MCa LINE L1 1096 1746 -4975 35 24 0 0 chr20 19912056 19912098 -52241784 + AT_rich Low_complexity Low_complexity 1 42 0 235 167 83 0 chr20 19912098 19912170 -52241712 + L1MCa LINE L1 1665 1742 -4798 362 255 132 49 chr20 19912191 19912419 -52241463 + L1MCa LINE L1 1835 2040 -4500 1085 254 96 3 chr20 19912643 19913231 -52240651 + L1MEc LINE L1 163 833 -5563 1023 215 203 62 chr20 19913232 19913390 -52240492 + LTR40b LTR ERVL 1 135 -327 2634 102 6 3 chr20 19913390 19913753 -52240129 + THE1B LTR MaLR 1 364 0 1023 215 203 62 chr20 19913753 19913999 -52239883 + LTR40b LTR ERVL 135 462 0 1106 298 27 18 chr20 19914000 19914672 -52239210 + L1MEc LINE L1 831 1508 -4888 2137 120 6 28 chr20 19914678 19914995 -52238887 + AluSx SINE Alu 1 310 -2 248 205 103 51 chr20 19915014 19915131 -52238751 + L1ME3A LINE L1 5825 5947 -223 264 266 0 16 chr20 19915391 19915455 -52238427 + GA-rich Low_complexity Low_complexity 3 65 0 24 0 0 0 chr20 19915625 19915649 -52238233 + AT_rich Low_complexity Low_complexity 1 24 0 225 292 44 0 chr20 19916327 19916464 -52237418 + L1P LINE L1 4906 5048 -1098 2143 107 9 3 chr20 19916475 19916820 -52237062 + L1MC1 LINE L1 5800 6146 -187 453 138 23 11 chr20 19916822 19916909 -52236973 + L1MC1 LINE L1 6246 6333 0 227 256 51 15 chr20 19917200 19917337 -52236545 + L1ME3 LINE L1 5289 5430 -740 295 302 140 22 chr20 19917416 19917774 -52236108 + L1ME3 LINE L1 5520 5919 -202 22 0 0 0 chr20 19917962 19917984 -52235898 + AT_rich Low_complexity Low_complexity 1 22 0 195 286 54 0 chr20 19919528 19919584 -52234298 - MIR SINE MIR -126 136 78 342 231 10 39 chr20 19919874 19919978 -52233904 + L1ME3 LINE L1 6056 6156 -6 188 294 87 11 chr20 19920082 19920174 -52233708 + MIR SINE MIR 149 247 -15 617 236 134 0 chr20 19920202 19920359 -52233523 - MER5A DNA MER1_type 0 189 12 797 172 103 116 chr20 19920488 19920790 -52233092 + LTR21A LTR ERV1 189 486 -19 308 272 195 31 chr20 19921296 19921557 -52232325 - MLT1I LTR MaLR -13 396 93 4110 33 21 0 chr20 19922017 19922497 -52231385 - LTR2B LTR ERV1 0 490 1 22482 123 11 6 chr20 19922497 19923533 -52230349 - Harlequin LTR ERV1 0 6896 5867 219 36 0 0 chr20 19923533 19923561 -52230321 + (TTG)n Simple_repeat Simple_repeat 2 29 0 22482 123 11 6 chr20 19923561 19926050 -52227832 - Harlequin LTR ERV1 -1029 5867 3352 6422 65 38 1 chr20 19926049 19927016 -52226866 - Harlequin LTR ERV1 -4322 2574 1572 * 6017 86 12 24 chr20 19927001 19927915 -52225967 - Harlequin LTR ERV1 -5993 903 1 * 3991 44 21 0 chr20 19927916 19928395 -52225487 - LTR2B LTR ERV1 -1 489 1 191 36 36 0 chr20 19929020 19929048 -52224834 + (TG)n Simple_repeat Simple_repeat 2 30 0 842 259 15 0 chr20 19931110 19931307 -52222575 + MIR SINE MIR 60 259 -3 582 174 8 0 chr20 19935250 19935382 -52218500 - LTR37A LTR ERV1 -11 415 283 324 0 0 0 chr20 19935382 19935418 -52218464 + (TG)n Simple_repeat Simple_repeat 2 37 0 1909 180 12 0 chr20 19935436 19935770 -52218112 + MER7A DNA MER2_type 11 346 0 1063 240 123 44 chr20 19936425 19936976 -52216906 - HsTC2 DNA Tc2 -15 1883 1289 269 275 28 46 chr20 19937334 19937443 -52216439 - L2 LINE L2 0 3313 3207 2505 68 0 3 chr20 19937471 19937798 -52216084 - AluY SINE Alu 0 326 1 2948 139 27 57 chr20 19937815 19938007 -52215875 - L1MA9 LINE L1 -365 5947 5751 249 33 0 0 chr20 19938007 19938037 -52215845 + (TG)n Simple_repeat Simple_repeat 2 31 0 2948 139 27 57 chr20 19938037 19938479 -52215403 - L1MA9 LINE L1 -561 5751 5332 976 216 0 4 chr20 19938475 19938702 -52215180 - L1 LINE L1 -2478 3668 3443 * 11600 201 37 15 chr20 19938681 19940706 -52213176 - L1MA9 LINE L1 -802 5344 3231 2436 88 0 0 chr20 19940706 19941012 -52212870 - AluY SINE Alu -5 306 1 11600 201 37 15 chr20 19941012 19941952 -52211930 - L1MA9 LINE L1 -2915 3231 2313 264 208 0 0 chr20 19942266 19942319 -52211563 + MER58 DNA MER1_type 2366 2418 -2 246 156 0 0 chr20 19944191 19944236 -52209646 + (TA)n Simple_repeat Simple_repeat 2 46 0 2024 201 19 61 chr20 19944435 19944958 -52208924 + MLT1D LTR MaLR 5 505 0 250 291 52 45 chr20 19945132 19945219 -52208663 - L2 LINE L2 -1 3271 3181 372 71 0 0 chr20 19945219 19945275 -52208607 + (CA)n Simple_repeat Simple_repeat 1 56 0 250 291 52 45 chr20 19945275 19945321 -52208561 - L2 LINE L2 -91 3181 3137 473 241 0 0 chr20 19945336 19945419 -52208463 + MER5A DNA MER1_type 6 88 -101 222 279 12 47 chr20 19945365 19945451 -52208431 - MER5A DNA MER1_type -23 166 84 * 180 0 0 0 chr20 19945497 19945517 -52208365 + (TG)n Simple_repeat Simple_repeat 1 20 0 732 222 5 74 chr20 19945700 19945826 -52208056 - MER5A DNA MER1_type 0 189 81 2312 82 0 0 chr20 19945826 19946117 -52207765 - AluSg SINE Alu -19 291 1 732 222 5 74 chr20 19946117 19946193 -52207689 - MER5A DNA MER1_type -108 81 1 2514 120 199 47 chr20 19946633 19947166 -52206716 - LTR18B LTR ERVL 0 614 1 23 0 0 0 chr20 19949750 19949773 -52204109 + AT_rich Low_complexity Low_complexity 1 23 0 530 383 99 26 chr20 19950063 19950528 -52203354 - L3 LINE CR1 -13 1564 1066 736 255 104 9 chr20 19950664 19950876 -52203006 + MIR SINE MIR 30 261 -1 2370 92 0 0 chr20 19951623 19951918 -52201964 + AluSq SINE Alu 1 295 -18 694 254 36 6 chr20 19954495 19954660 -52199222 + MER5B DNA MER1_type 3 172 -6 2311 97 0 0 chr20 19955048 19955336 -52198546 + AluSc SINE Alu 1 288 -21 445 299 90 0 chr20 19956354 19956488 -52197394 + MIR SINE MIR 40 185 -77 324 245 136 45 chr20 19957627 19957782 -52196100 - L1M4 LINE L1 -1447 4699 4531 349 218 40 57 chr20 19957956 19958080 -52195802 - L1M4 LINE L1 -763 5383 5262 338 317 78 39 chr20 19958104 19958284 -52195598 - MIR3 SINE MIR -19 189 3 924 297 87 39 chr20 19958599 19958692 -52195190 + L2 LINE L2 2256 2343 -971 1636 74 37 0 chr20 19958692 19958908 -52194974 - AluSq SINE Alu -13 300 77 924 297 87 39 chr20 19958908 19959249 -52194633 + L2 LINE L2 2343 2711 -603 291 337 1 22 chr20 19959323 19959426 -52194456 + L2 LINE L2 2881 2982 -331 390 300 17 0 chr20 19959426 19959546 -52194336 + L2 LINE L2 3190 3311 -2 210 376 62 25 chr20 19959697 19959859 -52194023 + L2 LINE L2 2832 2999 -314 259 306 35 0 chr20 19959891 19959976 -52193906 + L2 LINE L2 3185 3272 0 245 370 55 28 chr20 19960012 19960193 -52193689 + L2 LINE L2 3086 3271 -1 232 254 0 0 chr20 19961696 19961755 -52192127 - MLT1J2 LTR MaLR -115 335 277 750 263 23 0 chr20 19961792 19961967 -52191915 + MER5A DNA MER1_type 11 189 0 334 324 29 12 chr20 19961978 19962151 -52191731 - MLT1J1 LTR MaLR -232 214 39 417 284 142 83 chr20 19962301 19962724 -52191158 + L2 LINE L2 2813 3260 -12 277 279 27 18 chr20 19963592 19963703 -52190179 - MIR SINE MIR -150 112 1 459 269 126 67 chr20 19963750 19963988 -52189894 - MIR SINE MIR 0 262 11 213 94 0 0 chr20 19964062 19964094 -52189788 + (TGAA)n Simple_repeat Simple_repeat 1 32 0 2465 72 0 3 chr20 19964192 19964499 -52189383 - AluY SINE Alu -5 306 1 525 333 16 16 chr20 19964635 19964818 -52189064 - MER5A DNA MER1_type 0 189 7 2464 74 3 0 chr20 19965344 19965643 -52188239 + AluY SINE Alu 3 302 -9 694 313 30 21 chr20 19965650 19965979 -52187903 - LTR16C LTR ERVL 0 491 160 314 325 68 26 chr20 19966266 19966457 -52187425 + L1MEd LINE L1 449 647 -5472 366 42 0 0 chr20 19966646 19966694 -52187188 + (CA)n Simple_repeat Simple_repeat 1 48 0 207 0 0 0 chr20 19967089 19967112 -52186770 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2134 97 0 24 chr20 19968012 19968341 -52185541 + AluSq SINE Alu 1 322 0 259 271 158 15 chr20 19968718 19968851 -52185031 + MIR3 SINE MIR 8 159 -49 199 262 71 151 chr20 19970276 19970528 -52183354 + L2 LINE L2 2999 3230 -42 1448 196 39 28 chr20 19971073 19971431 -52182451 - MLT1A2 LTR MaLR -8 366 5 394 318 153 19 chr20 19972904 19973165 -52180717 + HAL1b LINE L1 98 393 -955 530 311 40 37 chr20 19973459 19973787 -52180095 + L1MC/D LINE L1 5474 5802 -2006 1205 167 48 12 chr20 19974313 19974564 -52179318 + L1PA16 LINE L1 5904 6163 -3 241 172 31 16 chr20 19974657 19974721 -52179161 + GA-rich Low_complexity Low_complexity 3 67 0 493 221 3 45 chr20 19974749 19975041 -52178841 + GA-rich Low_complexity Low_complexity 1 279 0 325 289 67 32 chr20 19975749 19975904 -52177978 - MIR SINE MIR -57 151 37 206 225 0 0 chr20 19976011 19976051 -52177831 + GA-rich Low_complexity Low_complexity 1 40 0 2174 149 3 6 chr20 19976814 19977176 -52176706 - L1PB1 LINE L1 -3 6148 5788 488 103 29 40 chr20 19977178 19977353 -52176529 + (TATAA)n Simple_repeat Simple_repeat 3 175 0 806 131 0 0 chr20 19977353 19977483 -52176399 - L1PB1 LINE L1 -348 5803 5674 439 107 0 6 chr20 19977483 19977559 -52176323 + L1PB1 LINE L1 5601 5673 -486 275 267 83 8 chr20 19978059 19978179 -52175703 - MLT1I LTR MaLR -268 141 13 223 314 9 19 chr20 19978931 19979036 -52174846 + (CA)n Simple_repeat Simple_repeat 1 104 0 32 0 0 0 chr20 19979680 19979712 -52174170 + AT_rich Low_complexity Low_complexity 1 32 0 348 206 75 47 chr20 19979844 19979951 -52173931 - L1M LINE L1 -801 5363 5254 287 303 41 41 chr20 19980194 19980508 -52173374 - L1MEc LINE L1 -4811 1499 1186 306 318 5 79 chr20 19980516 19980730 -52173152 - L1MEc LINE L1 -5036 1083 886 500 247 24 27 chr20 19981416 19981718 -52172164 - L1MC/D LINE L1 -756 5390 5139 377 261 0 8 chr20 19984599 19984718 -52169164 - MER103 DNA DNA -44 122 5 1787 212 14 12 chr20 19985151 19985610 -52168272 - MER89 LTR ERV1 0 559 1 1980 179 71 3 chr20 19986145 19986526 -52167356 - MSTB LTR MaLR 0 426 20 2435 212 26 20 chr20 19987488 19988025 -52165857 - MER87 LTR ERV1 0 541 2 2038 129 0 3 chr20 19988824 19989110 -52164772 - AluSx SINE Alu -7 305 21 251 290 0 0 chr20 19989142 19989204 -52164678 - MIR SINE MIR -76 132 71 302 283 66 46 chr20 19989421 19989573 -52164309 + L1ME LINE L1 5656 5810 -311 267 247 82 62 chr20 19989631 19989777 -52164105 + MLT1G1 LTR MaLR 162 310 -285 239 246 66 0 chr20 19990341 19990402 -52163480 + L1MEd LINE L1 704 768 -5351 2317 223 66 16 chr20 19990757 19991456 -52162426 + L1ME2 LINE L1 5430 6163 -1 189 107 0 0 chr20 19992190 19992218 -52161664 + (A)n Simple_repeat Simple_repeat 1 28 0 23 0 0 0 chr20 19995426 19995449 -52158433 + AT_rich Low_complexity Low_complexity 1 23 0 2234 84 42 35 chr20 19996157 19996467 -52157415 + AluSx SINE Alu 1 312 0 187 261 39 92 chr20 19996722 19996852 -52157030 + MIR SINE MIR 116 238 -24 793 294 118 0 chr20 19997252 19997565 -52156317 + MLT1I LTR MaLR 60 409 0 510 362 91 6 chr20 19997612 19997930 -52155952 + L2 LINE L2 2827 3171 -142 210 37 0 0 chr20 19998013 19998040 -52155842 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2021 125 0 0 chr20 19998246 19998664 -52155218 - AluSg SINE Alu 0 418 1 359 282 95 81 chr20 19998671 19998822 -52155060 + L1M4 LINE L1 2786 2933 -3213 1630 175 32 51 chr20 19998822 19999194 -52154688 + MLT1A1 LTR MaLR 1 365 0 359 282 95 81 chr20 19999194 19999485 -52154397 + L1M4 LINE L1 2933 3234 -2912 215 222 0 0 chr20 19999712 19999766 -52154116 + (TCTA)n Simple_repeat Simple_repeat 1 54 0 309 215 112 9 chr20 19999835 19999942 -52153940 - L1ME4a LINE L1 -182 5939 5822 373 362 154 13 chr20 19999972 20000420 -52153462 - L1ME4a LINE L1 -346 5775 5265 284 256 23 70 chr20 20000673 20000802 -52153080 + MLT1K LTR MaLR 117 239 -349 259 229 71 0 chr20 20000850 20000920 -52152962 + MLT1K LTR MaLR 496 570 -18 832 271 91 64 chr20 20000920 20001478 -52152404 + L2 LINE L2 2748 3312 -1 321 311 132 6 chr20 20001997 20002210 -52151672 - MLT1J2 LTR MaLR -167 279 15 2271 114 10 3 chr20 20002778 20003084 -52150798 + AluSx SINE Alu 1 308 -4 751 244 54 5 chr20 20004080 20004285 -52149597 - MIR SINE MIR -41 221 7 708 208 27 16 chr20 20004287 20004470 -52149412 - MER5A DNA MER1_type -4 185 1 335 315 212 5 chr20 20004682 20004885 -52148997 + MIR SINE MIR 18 262 0 467 266 18 0 chr20 20005286 20005395 -52148487 - L2 LINE L2 -1 3312 3202 239 254 313 29 chr20 20005443 20005695 -52148187 - L2 LINE L2 -291 3022 2709 258 209 0 0 chr20 20005967 20006010 -52147872 + MER5B DNA MER1_type 6 48 -130 999 239 94 8 chr20 20006025 20006377 -52147505 + L1MD3 LINE L1 7603 7984 -11 438 295 41 0 chr20 20006380 20006502 -52147380 + MER5B DNA MER1_type 50 176 -2 568 273 16 2 chr20 20007412 20007559 -52146323 + MER5B DNA MER1_type 26 161 -17 582 189 116 30 chr20 20007575 20007739 -52146143 - MER58A DNA MER1_type 0 224 47 413 240 0 21 chr20 20007770 20007866 -52146016 + MER5A DNA MER1_type 11 104 -85 998 263 178 35 chr20 20009336 20009846 -52144036 + MLT1G1 LTR MaLR 1 583 -12 187 274 0 84 chr20 20009913 20010008 -52143874 + L2 LINE L2 2224 2310 -1004 205 382 96 19 chr20 20010486 20010643 -52143239 + L2 LINE L2 2896 3064 -208 213 273 0 23 chr20 20010735 20010779 -52143103 + MER5A DNA MER1_type 17 59 -130 946 221 0 0 chr20 20010851 20011023 -52142859 + MER5A DNA MER1_type 17 188 -1 594 196 152 0 chr20 20011035 20011173 -52142709 + MER5B DNA MER1_type 16 174 -4 587 230 149 31 chr20 20011191 20011352 -52142530 + MER5A DNA MER1_type 7 186 -3 321 197 15 0 chr20 20011354 20011420 -52142462 + L2 LINE L2 3187 3253 -19 379 300 142 0 chr20 20011559 20011679 -52142203 - L2 LINE L2 -2 3270 3134 608 270 130 32 chr20 20011905 20012190 -52141692 - LTR16C LTR ERVL -12 479 167 5006 182 38 6 chr20 20012261 20013909 -52139973 - L1PA16 LINE L1 -9 6157 4387 390 42 0 0 chr20 20013909 20013957 -52139925 + (TATG)n Simple_repeat Simple_repeat 2 49 0 5006 182 38 6 chr20 20013957 20014231 -52139651 - L1PA16 LINE L1 -1779 4387 4123 937 178 16 37 chr20 20014234 20014425 -52139457 + MER5A DNA MER1_type 2 188 -1 362 278 53 38 chr20 20014619 20014752 -52139130 - L2 LINE L2 -1 3312 3178 182 236 36 18 chr20 20014793 20014848 -52139034 - MER5A DNA MER1_type -4 185 130 244 242 113 0 chr20 20014899 20014961 -52138921 - L2 LINE L2 -225 3047 2979 353 113 16 16 chr20 20015113 20015175 -52138707 + MLT1A1 LTR MaLR 1 62 -303 * 377 143 0 0 chr20 20015174 20015237 -52138645 + MLT1A1 LTR MaLR 301 363 -2 752 150 7 46 chr20 20015429 20015582 -52138300 + MER3 DNA MER1_type 60 206 -3 277 200 0 0 chr20 20015542 20015592 -52138290 - MER3 DNA MER1_type -119 90 41 * 422 334 190 16 chr20 20015592 20015966 -52137916 - L2 LINE L2 -641 2673 2235 225 357 85 16 chr20 20016216 20016345 -52137537 - L2 LINE L2 -10 3262 3125 412 238 83 48 chr20 20016777 20016945 -52136937 + L2 LINE L2 2734 2907 -407 192 333 227 13 chr20 20017033 20017183 -52136699 + L2 LINE L2 3106 3287 -26 563 294 38 34 chr20 20017259 20017494 -52136388 - MLT1L LTR MaLR -361 254 19 770 174 7 7 chr20 20017586 20017735 -52136147 - MER65B LTR ERV1 -381 150 2 5090 228 51 9 chr20 20017739 20018117 -52135765 - MER65B-int LTR ERV1 -5 4866 4505 2579 51 0 6 chr20 20018117 20018430 -52135452 + AluY SINE Alu 1 311 0 5090 228 51 9 chr20 20018430 20019373 -52134509 - MER65B-int LTR ERV1 -366 4505 3531 261 253 101 0 chr20 20019379 20019458 -52134424 - MER65A-int LTR ERV1 -847 4089 4003 927 239 130 8 chr20 20019467 20019868 -52134014 - MER65A-int LTR ERV1 -1141 3795 3346 299 108 31 46 chr20 20019912 20019977 -52133905 + FAM SINE Alu 116 179 0 1003 193 52 77 chr20 20019977 20020563 -52133319 - MER65A-int LTR ERV1 -1974 4022 2471 560 188 68 42 chr20 20020645 20020837 -52133045 - MER65A-int LTR ERV1 -2869 3729 3533 406 240 47 12 chr20 20020929 20021100 -52132782 - MER65A-int LTR ERV1 -6224 1896 1720 23 0 0 0 chr20 20021107 20021130 -52132752 + AT_rich Low_complexity Low_complexity 1 23 0 2016 108 0 14 chr20 20021130 20021446 -52132436 - AluSq SINE Alu 0 321 10 3034 186 59 109 chr20 20021452 20022723 -52131159 - MER65A-int LTR ERV1 -2450 2421 704 629 247 0 11 chr20 20022903 20023077 -52130805 + L1 LINE L1 2146 2317 -3829 1348 223 24 56 chr20 20023077 20023486 -52130396 - MER65A-int LTR ERV1 -4040 831 436 13734 207 34 13 chr20 20023509 20029328 -52124554 + L1MA5A LINE L1 11 6045 -743 4231 139 40 13 chr20 20029346 20030103 -52123779 + L1MA5A LINE L1 6159 6935 -4 786 199 22 98 chr20 20030111 20030428 -52123454 - MER65A-int LTR ERV1 -4509 362 70 2301 169 25 11 chr20 20030498 20030937 -52122945 - MER65A LTR ERV1 0 445 1 5734 184 32 28 chr20 20031267 20031398 -52122484 + L1MB7 LINE L1 3840 3969 -2215 2280 57 4 0 chr20 20031398 20031678 -52122204 - AluY SINE Alu -18 293 13 5734 184 32 28 chr20 20031678 20031976 -52121906 + L1MB7 LINE L1 3969 4264 -1920 2087 105 18 0 chr20 20031976 20032253 -52121629 + AluY SINE Alu 16 297 -14 5734 184 32 28 chr20 20032253 20034157 -52119725 + L1MB7 LINE L1 4264 6184 0 182 264 19 38 chr20 20035250 20035303 -52118579 - L2 LINE L2 -11 3302 3251 43 20 0 0 chr20 20036139 20036189 -52117693 + AT_rich Low_complexity Low_complexity 1 50 0 1187 164 139 2 chr20 20036266 20036904 -52116978 - L1MC1 LINE L1 -109 6224 5504 375 265 155 55 chr20 20037762 20038162 -52115720 + L2 LINE L2 2873 3312 -1 203 278 100 22 chr20 20038693 20038783 -52115099 - L2 LINE L2 -8 3305 3209 407 275 150 0 chr20 20038955 20039115 -52114767 - MIR SINE MIR 0 262 79 1962 147 42 6 chr20 20039355 20039689 -52114193 - MER7A DNA MER2_type -1 345 2 351 346 107 0 chr20 20039704 20039863 -52114019 + MIR SINE MIR 13 188 -74 788 167 0 0 chr20 20039867 20039987 -52113895 + FLAM_A SINE Alu 1 120 -13 231 360 9 18 chr20 20040043 20040154 -52113728 + L2 LINE L2 3141 3250 -22 231 277 27 47 chr20 20040360 20040508 -52113374 - L1MC4 LINE L1 -31 8011 7867 515 199 224 25 chr20 20040584 20040785 -52113097 - L1ME2 LINE L1 -19 6145 5905 1632 164 57 16 chr20 20041059 20041425 -52112457 + Charlie1b DNA MER1_type 3 383 -140 387 200 30 0 chr20 20041858 20041958 -52111924 + Charlie1b DNA MER1_type 411 513 -10 276 273 91 20 chr20 20042927 20043026 -52110856 + L3b LINE CR1 1296 1401 -182 230 114 0 23 chr20 20043391 20043435 -52110447 + (TCTCCC)n Simple_repeat Simple_repeat 1 43 0 1884 129 3 44 chr20 20043832 20044151 -52109731 + AluSx SINE Alu 1 307 0 180 0 0 0 chr20 20044552 20044572 -52109310 + (TTTTTG)n Simple_repeat Simple_repeat 1 20 0 865 204 17 23 chr20 20044607 20044783 -52109099 - MER5B DNA MER1_type -3 175 1 514 223 97 17 chr20 20044791 20044966 -52108916 - MER5A DNA MER1_type 0 189 1 330 26 0 0 chr20 20045380 20045419 -52108463 + (TG)n Simple_repeat Simple_repeat 2 40 0 653 215 32 91 chr20 20046357 20046543 -52107339 - MER5A DNA MER1_type -13 176 2 396 316 96 15 chr20 20046568 20046704 -52107178 + MER5B DNA MER1_type 32 178 0 989 144 31 62 chr20 20046753 20046947 -52106935 + MER5A DNA MER1_type 1 188 -1 625 269 158 31 chr20 20047673 20048090 -52105792 + MLT1H LTR MaLR 80 549 0 202 191 24 0 chr20 20048187 20048229 -52105653 + L2 LINE L2 3023 3065 -248 217 260 268 24 chr20 20048985 20049108 -52104774 - MIR SINE MIR -108 154 2 535 255 161 6 chr20 20050443 20050604 -52103278 - MER5A DNA MER1_type 0 189 4 2253 112 3 0 chr20 20050715 20051011 -52102871 + AluSg SINE Alu 1 297 -13 1835 203 126 46 chr20 20052525 20053027 -52100855 - MLT1F LTR MaLR 0 542 1 208 311 81 0 chr20 20054352 20054426 -52099456 + L2 LINE L2 2560 2639 -675 796 201 82 5 chr20 20054431 20054625 -52099257 + MER3 DNA MER1_type 1 209 0 2664 161 41 74 chr20 20055394 20056027 -52097855 - LTR9 LTR ERV1 0 612 1 257 294 34 14 chr20 20056648 20056794 -52097088 - L1ME LINE L1 -369 5752 5604 374 262 171 78 chr20 20057123 20057444 -52096438 + MLT1H LTR MaLR 199 549 0 284 310 27 0 chr20 20058303 20058402 -52095480 + MIR SINE MIR 33 137 -71 7316 154 17 5 chr20 20058818 20060195 -52093687 - L1PA13 LINE L1 -1743 4403 3011 6278 92 11 3 chr20 20060196 20061954 -52091928 + L1PA13 LINE L1 4379 6160 -3 1893 214 33 13 chr20 20062159 20062613 -52091269 - MLT1D LTR MaLR -8 497 35 * 2439 173 15 11 chr20 20062612 20063068 -52090814 + LTR32 LTR ERVL 14 471 0 261 125 0 0 chr20 20063068 20063107 -52090775 - MLT1D LTR MaLR -466 39 1 188 323 84 36 chr20 20063109 20063276 -52090606 + L2 LINE L2 2933 3107 -165 311 317 66 49 chr20 20064210 20064453 -52089429 + L3 LINE CR1 1298 1544 -33 835 133 6 6 chr20 20065279 20065445 -52088437 + (GA)n Simple_repeat Simple_repeat 2 167 0 578 232 132 26 chr20 20065851 20066041 -52087841 + MER63A DNA MER1_type 1 210 0 185 0 40 0 chr20 20067608 20067633 -52086249 + (CAAAG)n Simple_repeat Simple_repeat 1 26 0 1261 212 102 0 chr20 20068066 20068330 -52085552 + AluJo SINE Alu 1 291 -21 321 267 12 12 chr20 20068448 20068534 -52085348 - MIR SINE MIR -128 134 49 181 189 0 54 chr20 20068678 20068715 -52085167 - L2 LINE L2 -20 3252 3218 2213 118 7 7 chr20 20069037 20069342 -52084540 + AluSx SINE Alu 1 305 -7 205 304 0 0 chr20 20069422 20069468 -52084414 + L3b LINE CR1 1295 1340 -243 349 271 201 8 chr20 20069695 20069848 -52084034 + MIR SINE MIR 42 213 -49 1055 211 113 52 chr20 20070716 20071104 -52082778 - MLT1H LTR MaLR -8 541 130 512 336 78 17 chr20 20071302 20071534 -52082348 - MIR SINE MIR -13 249 4 207 0 0 0 chr20 20071866 20071889 -52081993 + (TAAAAA)n Simple_repeat Simple_repeat 2 24 0 344 263 90 53 chr20 20072409 20072542 -52081340 - MIR3 SINE MIR -56 152 15 431 187 179 45 chr20 20073105 20073239 -52080643 + L2 LINE L2 2376 2527 -787 28 0 0 0 chr20 20073386 20073414 -52080468 + AT_rich Low_complexity Low_complexity 1 28 0 1005 228 0 82 chr20 20073848 20074190 -52079692 + L1ME3 LINE L1 5740 6053 -109 971 222 5 10 chr20 20074212 20074415 -52079467 + MER58A DNA MER1_type 23 224 0 306 239 0 0 chr20 20074415 20074486 -52079396 + L1ME3 LINE L1 6045 6115 -47 669 63 36 18 chr20 20074506 20074617 -52079265 + (GGAA)n Simple_repeat Simple_repeat 4 116 0 561 286 106 11 chr20 20074834 20075023 -52078859 + MIR SINE MIR 48 254 -8 525 253 112 35 chr20 20076125 20076295 -52077587 - MLT1E LTR MaLR -205 388 206 3315 103 0 5 chr20 20076313 20076832 -52077050 - MER41A LTR ERV1 0 554 1 28 48 0 0 chr20 20076860 20076902 -52076980 + AT_rich Low_complexity Low_complexity 1 42 0 744 255 43 0 chr20 20076902 20077090 -52076792 - MLT1E LTR MaLR -397 196 1 335 310 70 23 chr20 20077299 20077428 -52076454 - MIR3 SINE MIR -62 146 12 4167 237 52 19 chr20 20077451 20078651 -52075231 + L1MB7 LINE L1 2 1241 -5301 1227 125 0 11 chr20 20078729 20078905 -52074977 + AluSg/x SINE Alu 130 303 -7 4740 241 88 20 chr20 20078908 20080439 -52073443 + L1MB7 LINE L1 1291 2716 -3928 1848 162 0 40 chr20 20080439 20080736 -52073146 + AluSx SINE Alu 1 285 -27 4740 241 88 20 chr20 20080736 20082025 -52071857 + L1MB7 LINE L1 2716 4325 -2319 2148 190 47 22 chr20 20082016 20083757 -52070125 + L1MB7 LINE L1 4784 6668 -14 * 1542 252 82 19 chr20 20084035 20084623 -52069259 + L1ME2 LINE L1 5530 6154 -10 196 265 82 0 chr20 20084649 20084698 -52069184 + MER5B DNA MER1_type 125 177 -1 24 0 0 0 chr20 20084856 20084880 -52069002 + AT_rich Low_complexity Low_complexity 1 24 0 194 298 11 32 chr20 20085623 20085717 -52068165 + MIR SINE MIR 170 261 -1 568 237 129 25 chr20 20085798 20086247 -52067635 + MLT1F LTR MaLR 1 540 -2 360 245 90 58 chr20 20086710 20086898 -52066984 - MIR SINE MIR 0 262 69 305 125 62 0 chr20 20087354 20087402 -52066480 + MER5B DNA MER1_type 1 51 -127 264 227 107 13 chr20 20088177 20088252 -52065630 + L2 LINE L2 3227 3308 -5 402 271 20 112 chr20 20089084 20089335 -52064547 - MIR SINE MIR -14 248 21 979 265 63 57 chr20 20089915 20090391 -52063491 + MLT1H LTR MaLR 71 549 0 4209 183 34 1 chr20 20090433 20091226 -52062656 + L1MC1 LINE L1 20 838 -5588 555 86 76 5 chr20 20091229 20091427 -52062455 + (TA)n Simple_repeat Simple_repeat 1 212 0 3606 161 55 19 chr20 20091428 20092388 -52061494 + L1MC1 LINE L1 846 1944 -4482 1241 114 6 0 chr20 20092394 20092561 -52061321 - AluSp SINE Alu -26 287 120 3916 226 42 10 chr20 20092565 20092669 -52061213 + L1MC1 LINE L1 2009 2108 -4318 1656 161 21 7 chr20 20092669 20092948 -52060934 - AluJb SINE Alu -9 303 21 3916 226 42 10 chr20 20092948 20094509 -52059373 + L1MC1 LINE L1 2108 3727 -2699 726 168 0 0 chr20 20094513 20094626 -52059256 + FLAM_C SINE Alu 1 113 -30 1661 193 23 7 chr20 20094650 20094951 -52058931 + AluJo SINE Alu 1 306 -6 761 167 23 6 chr20 20094957 20095131 -52058751 + GA-rich Low_complexity Low_complexity 3 179 0 235 221 13 13 chr20 20095153 20095230 -52058652 + GA-rich Low_complexity Low_complexity 3 79 0 6001 230 25 21 chr20 20095230 20097015 -52056867 + L1MC1 LINE L1 3721 5512 -914 4987 124 32 61 chr20 20097016 20097987 -52055895 + L1MC1 LINE L1 5671 6613 0 257 337 111 68 chr20 20098373 20098421 -52055461 - L2 LINE L2 0 3313 3269 2273 74 0 7 chr20 20098421 20098704 -52055178 - AluSq SINE Alu -13 300 20 257 337 111 68 chr20 20098704 20099023 -52054859 - L2 LINE L2 -44 3269 2930 383 315 14 91 chr20 20099156 20099432 -52054450 + MER115 DNA AcHobo 56 310 -383 870 206 46 0 chr20 20099499 20099693 -52054189 + MER115 DNA AcHobo 477 679 -14 326 256 0 4 chr20 20099746 20099876 -52054006 - MER5A DNA MER1_type -1 188 9 22 0 0 0 chr20 20100169 20100191 -52053691 + AT_rich Low_complexity Low_complexity 1 22 0 259 221 234 32 chr20 20101479 20101633 -52052249 - Charlie8 DNA MER1_type -2154 263 79 3057 72 26 2 chr20 20101779 20102198 -52051684 - L1PA10 LINE L1 -1 6167 5739 738 89 45 0 chr20 20102198 20102310 -52051572 + L1P4 LINE L1 5551 5667 -501 248 260 26 26 chr20 20103580 20103657 -52050225 + MIR SINE MIR 39 115 -147 356 273 101 14 chr20 20104908 20105047 -52048835 + MIR3 SINE MIR 33 183 -25 2127 139 0 0 chr20 20105484 20105778 -52048104 - AluSx SINE Alu -18 294 1 21 0 0 0 chr20 20105786 20105807 -52048075 + AT_rich Low_complexity Low_complexity 1 21 0 1171 223 148 47 chr20 20105903 20106436 -52047446 + MLT1G LTR MaLR 2 588 -2 2008 165 15 21 chr20 20106492 20106831 -52047051 - MER1B DNA MER1_type 0 337 1 291 335 168 19 chr20 20107130 20107339 -52046543 + MIR SINE MIR 2 241 -21 2265 161 78 22 chr20 20107541 20108000 -52045882 - MER31A LTR ERV1 0 485 1 184 333 38 76 chr20 20108129 20108234 -52045648 - L2 LINE L2 -4 3309 3209 617 260 18 26 chr20 20108354 20108548 -52045334 - MIR SINE MIR -41 221 25 347 280 112 21 chr20 20108770 20108913 -52044969 + MLT1J2 LTR MaLR 273 428 -22 215 344 62 0 chr20 20109383 20109479 -52044403 - L2 LINE L2 0 3272 3171 304 219 26 53 chr20 20111142 20111256 -52042626 - MER33 DNA MER1_type 0 363 253 294 211 155 56 chr20 20111236 20111378 -52042504 - MER33 DNA MER1_type -164 160 5 * 1622 243 105 89 chr20 20111382 20112013 -52041869 + MER115 DNA AcHobo 53 693 0 317 235 39 5 chr20 20112570 20112706 -52041176 - MLT1G LTR MaLR 0 595 401 244 235 0 0 chr20 20112921 20112972 -52040910 - MLT1I LTR MaLR -274 135 85 * 291 241 24 12 chr20 20112947 20113030 -52040852 - MLT1F LTR MaLR -439 103 20 332 350 26 0 chr20 20113303 20113420 -52040462 + L2 LINE L2 3139 3258 -14 689 140 0 27 chr20 20113422 20113572 -52040310 + (GGGA)n Simple_repeat Simple_repeat 3 148 0 615 303 96 0 chr20 20113662 20113880 -52040002 - MIR SINE MIR -11 251 13 1064 274 51 17 chr20 20114548 20114899 -52038983 + L1ME3A LINE L1 5534 5896 -274 290 250 83 0 chr20 20115434 20115518 -52038364 - LTR16C LTR ERVL -14 477 387 279 0 0 0 chr20 20116392 20116423 -52037459 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 580 107 0 0 chr20 20116427 20116511 -52037371 - AluSg/x SINE Alu -31 278 195 766 235 162 67 chr20 20118352 20118888 -52034994 + MLT1G1 LTR MaLR 1 587 -8 2592 138 18 43 chr20 20118982 20119424 -52034458 + Tigger2a DNA MER2_type 1 431 -3 1014 234 87 91 chr20 20120013 20120552 -52033330 - MLT1H LTR MaLR 0 549 13 458 317 67 0 chr20 20121321 20121501 -52032381 + MIR SINE MIR 61 252 -10 1007 240 58 77 chr20 20121854 20122280 -52031602 - MLT1G LTR MaLR -161 434 36 252 191 132 0 chr20 20122280 20122348 -52031534 - MLT1G LTR MaLR -518 77 1 29 47 0 0 chr20 20122367 20122410 -52031472 + AT_rich Low_complexity Low_complexity 1 43 0 1571 183 23 103 chr20 20122426 20122824 -52031058 - MLT1A2 LTR MaLR -4 370 5 2536 205 74 132 chr20 20122828 20123706 -52030176 - MLT1A2-int LTR MaLR 0 1735 544 1277 187 47 4 chr20 20123699 20123956 -52029926 - MLT1A2-int LTR MaLR -1103 268 1 * 1311 205 31 83 chr20 20123962 20124179 -52029703 - MLT1A2 LTR MaLR -6 368 178 204 40 0 0 chr20 20124179 20124204 -52029678 + (GA)n Simple_repeat Simple_repeat 2 26 0 1311 205 31 83 chr20 20124204 20124371 -52029511 - MLT1A2 LTR MaLR -196 178 4 254 270 112 53 chr20 20124840 20124992 -52028890 - MLT1K LTR MaLR -289 299 139 1828 177 33 22 chr20 20125684 20126045 -52027837 + MLT1A1 LTR MaLR 1 365 0 851 250 103 56 chr20 20126326 20126886 -52026996 + MLT1G1 LTR MaLR 1 626 0 203 280 20 0 chr20 20128218 20128268 -52025614 + L2 LINE L2 3221 3271 -1 227 336 28 19 chr20 20128293 20128400 -52025482 - L2 LINE L2 -214 3058 2951 386 278 48 32 chr20 20129595 20129721 -52024161 - L2 LINE L2 0 3272 3145 376 262 11 59 chr20 20129931 20130118 -52023764 + (CAGTG)n Simple_repeat Simple_repeat 1 178 0 265 276 0 78 chr20 20130137 20130329 -52023553 + (CAGTA)n Simple_repeat Simple_repeat 3 179 0 * 474 216 40 34 chr20 20130218 20130394 -52023488 + (CAGTG)n Simple_repeat Simple_repeat 1 177 0 190 111 0 44 chr20 20130413 20130458 -52023424 + (CAGTG)n Simple_repeat Simple_repeat 1 43 0 343 185 0 58 chr20 20130492 20130681 -52023201 + (CAGTG)n Simple_repeat Simple_repeat 1 178 0 206 244 30 38 chr20 20130699 20130830 -52023052 + (CTGTG)n Simple_repeat Simple_repeat 5 134 0 * 374 176 55 55 chr20 20130746 20130911 -52022971 + (TAGTG)n Simple_repeat Simple_repeat 4 168 0 * 460 248 17 48 chr20 20130799 20131200 -52022682 + (CAGTG)n Simple_repeat Simple_repeat 1 388 0 1084 224 19 0 chr20 20132428 20132642 -52021240 - MER58A DNA MER1_type 0 224 7 189 147 0 0 chr20 20132776 20132810 -52021072 + (TATATG)n Simple_repeat Simple_repeat 3 36 0 248 236 78 11 chr20 20132816 20132918 -52020964 + L1MC4 LINE L1 6572 6652 -1133 255 31 0 0 chr20 20133466 20133498 -52020384 + (TG)n Simple_repeat Simple_repeat 2 33 0 858 227 132 73 chr20 20133884 20134276 -52019606 + L1MEd LINE L1 520 953 -5166 1936 172 29 20 chr20 20134276 20134619 -52019263 - MER7A DNA MER2_type -1 345 2 858 227 132 73 chr20 20134619 20134758 -52019124 + L1MEd LINE L1 953 1082 -5037 353 138 28 119 chr20 20134813 20134922 -52018960 - Charlie8 DNA MER1_type -2245 172 74 221 163 0 0 chr20 20135887 20135930 -52017952 + T-rich Low_complexity Low_complexity 1 43 0 2528 55 0 13 chr20 20136129 20136436 -52017446 + AluY SINE Alu 1 303 -8 526 198 28 0 chr20 20136961 20137067 -52016815 - MER5A DNA MER1_type -77 112 4 406 274 27 14 chr20 20137079 20137225 -52016657 - MER5B DNA MER1_type 0 178 31 1709 143 50 18 chr20 20137230 20137510 -52016372 + AluJo SINE Alu 10 298 -14 976 232 65 77 chr20 20138648 20139049 -52014833 - MSTD LTR MaLR 0 396 1 776 99 18 0 chr20 20140511 20140622 -52013260 - FLAM_C SINE Alu -18 125 13 21 36 0 0 chr20 20141119 20141147 -52012735 + AT_rich Low_complexity Low_complexity 1 28 0 1891 225 139 15 chr20 20141325 20141863 -52012019 - MLT1E2 LTR MaLR -2 624 20 21 36 0 0 chr20 20141976 20142004 -52011878 + AT_rich Low_complexity Low_complexity 1 28 0 236 302 0 35 chr20 20142455 20142541 -52011341 + (TATATG)n Simple_repeat Simple_repeat 6 88 0 29 0 0 0 chr20 20142603 20142632 -52011250 + AT_rich Low_complexity Low_complexity 1 29 0 3950 99 42 54 chr20 20142814 20142970 -52010912 + LTR9B LTR ERV1 9 165 -479 2259 64 3 80 chr20 20142970 20143297 -52010585 - AluY SINE Alu -9 302 1 3950 99 42 54 chr20 20143297 20143784 -52010098 + LTR9B LTR ERV1 165 644 0 294 268 102 64 chr20 20144179 20144336 -52009546 - MIR3 SINE MIR -44 164 2 436 176 11 0 chr20 20144401 20144492 -52009390 + L1MA9 LINE L1 6189 6280 -32 554 280 102 51 chr20 20144550 20144864 -52009018 + HAL1 LINE L1 116 445 -2062 1367 169 97 133 chr20 20145124 20145598 -52008284 + MLT1E3 LTR MaLR 189 615 -9 994 146 10 44 chr20 20145751 20145893 -52007989 - L1MA4A LINE L1 -3 6300 6155 267 31 0 0 chr20 20145893 20145925 -52007957 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 1846 144 44 0 chr20 20145925 20146195 -52007687 - AluJb SINE Alu -29 283 2 994 146 10 44 chr20 20146195 20146256 -52007626 - L1MA4A LINE L1 -146 6157 6103 251 286 60 12 chr20 20147148 20147232 -52006650 - MIR3 SINE MIR -11 197 110 356 314 39 13 chr20 20147329 20147485 -52006397 + MIR SINE MIR 73 232 -30 2069 105 6 54 chr20 20148188 20148501 -52005381 - AluSx SINE Alu -14 298 1 414 0 0 0 chr20 20148640 20148686 -52005196 + (CA)n Simple_repeat Simple_repeat 1 46 0 1318 268 67 29 chr20 20148815 20149266 -52004616 - LTR16C LTR ERVL -18 473 6 2326 105 3 0 chr20 20150080 20150385 -52003497 + AluSx SINE Alu 1 306 -6 723 304 174 33 chr20 20151369 20151885 -52001997 - MLT1G1 LTR MaLR -2 593 5 1064 302 110 6 chr20 20152508 20153173 -52000709 + L2 LINE L2 2571 3311 -2 681 296 31 14 chr20 20153273 20153652 -52000230 + LTR16A LTR ERVL 18 444 -6 1211 182 18 36 chr20 20154310 20154585 -51999297 + L1MA9 LINE L1 6021 6290 -22 1884 156 3 19 chr20 20154631 20154946 -51998936 + AluJb SINE Alu 1 310 -2 318 254 85 25 chr20 20154948 20155066 -51998816 + L1ME LINE L1 5698 5822 -299 1582 152 22 7 chr20 20155091 20155360 -51998522 + AluSx SINE Alu 37 309 -3 1920 142 0 30 chr20 20156276 20156578 -51997304 - AluSx SINE Alu -19 293 1 315 209 27 0 chr20 20157545 20157655 -51996227 + GA-rich Low_complexity Low_complexity 2 114 0 346 281 36 71 chr20 20157664 20157773 -51996109 + L1ME4a LINE L1 5734 5845 -276 2369 96 0 0 chr20 20157773 20158065 -51995817 + AluSg SINE Alu 1 292 -18 346 281 36 71 chr20 20158065 20158208 -51995674 + L1ME4a LINE L1 5845 5977 -144 226 226 19 0 chr20 20158371 20158424 -51995458 - MIR SINE MIR -104 158 105 297 75 0 0 chr20 20158661 20158701 -51995181 + (T)n Simple_repeat Simple_repeat 1 40 0 1135 194 26 9 chr20 20159761 20159988 -51993894 + Charlie1 DNA MER1_type 9 239 -2522 421 220 30 0 chr20 20159974 20160074 -51993808 + Charlie1 DNA MER1_type 2622 2724 -37 * 251 285 26 83 chr20 20160902 20161130 -51992752 - L2 LINE L2 -743 2571 2357 2919 140 15 33 chr20 20162220 20162610 -51991272 + MER41B LTR ERV1 108 346 -140 2226 104 0 0 chr20 20162610 20162908 -51990974 - AluSg SINE Alu -12 298 1 2919 140 15 33 chr20 20162908 20163035 -51990847 + MER41B LTR ERV1 346 474 -12 492 253 102 15 chr20 20163155 20163437 -51990445 - MLT1I LTR MaLR -6 403 67 256 266 111 6 chr20 20163643 20163746 -51990136 - MIR SINE MIR -63 145 40 528 293 159 31 chr20 20164559 20164849 -51989033 - L3 LINE CR1 -29 1548 1222 2134 84 0 3 chr20 20165349 20165673 -51988209 - AluY SINE Alu 0 323 1 2157 112 0 3 chr20 20166230 20166533 -51987349 + AluSc SINE Alu 1 302 -7 539 242 51 67 chr20 20168460 20168638 -51985244 - MER5B DNA MER1_type 0 178 4 6712 59 6 42 chr20 20168676 20169666 -51984216 - SVA Other Other 0 1386 433 2634 88 24 90 chr20 20169733 20170548 -51983334 - SVA Other Other -518 868 393 2436 41 0 0 chr20 20171271 20171563 -51982319 + AluY SINE Alu 1 292 -19 292 333 11 73 chr20 20172959 20173136 -51980746 - MIR SINE MIR -49 213 48 209 305 36 11 chr20 20173365 20173486 -51980396 + MIR SINE MIR 41 147 -61 3274 71 18 29 chr20 20173538 20173987 -51979895 - MLT2A1 LTR ERVL 0 444 1 270 0 0 0 chr20 20174247 20174277 -51979605 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 214 224 0 35 chr20 20174354 20174412 -51979470 + GA-rich Low_complexity Low_complexity 4 59 0 248 339 85 0 chr20 20174416 20174546 -51979336 - MIR SINE MIR -17 245 105 2350 97 0 0 chr20 20175901 20176211 -51977671 + AluSg SINE Alu 1 310 0 484 301 24 60 chr20 20176443 20176529 -51977353 - MIR SINE MIR -6 256 168 1623 170 11 11 chr20 20176529 20176831 -51977051 + AluSx SINE Alu 1 302 0 484 301 24 60 chr20 20176831 20177004 -51976878 - MIR SINE MIR -94 168 12 21 0 0 0 chr20 20177004 20177025 -51976857 + AT_rich Low_complexity Low_complexity 1 21 0 372 269 28 64 chr20 20177576 20177717 -51976165 + MIR SINE MIR 14 149 -113 674 298 90 51 chr20 20177717 20178113 -51975769 - LTR16A1 LTR ERVL 0 482 73 2301 127 94 8 chr20 20179794 20180188 -51973694 - MSTA LTR MaLR 0 428 1 1659 212 84 47 chr20 20180204 20180735 -51973147 - MLT1F1 LTR MaLR 0 567 17 264 272 202 29 chr20 20181414 20181587 -51972295 + MLT1H LTR MaLR 347 549 0 309 230 19 118 chr20 20181591 20181752 -51972130 + MLT1H-int LTR MaLR 5 149 -1222 268 300 173 47 chr20 20182646 20182923 -51970959 + MLT1H-int LTR MaLR 1028 1339 -32 517 295 35 37 chr20 20182953 20183224 -51970658 + MLT1H LTR MaLR 1 316 -233 372 251 144 41 chr20 20183394 20183589 -51970293 + MLT1H LTR MaLR 333 547 -8 213 248 152 88 chr20 20184391 20184516 -51969366 + L2 LINE L2 3136 3268 -4 * 1778 276 116 38 chr20 20184510 20185500 -51968382 - L2 LINE L2 0 3313 2235 512 321 0 0 chr20 20186033 20186164 -51967718 - MER94 DNA DNA -1 133 3 2263 104 3 0 chr20 20186615 20186923 -51966959 + AluSx SINE Alu 1 309 -3 418 298 86 7 chr20 20187193 20187344 -51966538 - MIR SINE MIR -53 209 47 579 149 41 8 chr20 20187499 20187620 -51966262 - MER96B DNA MER1_type? -8 409 285 253 95 0 0 chr20 20187620 20187662 -51966220 - L1MA9 LINE L1 -282 6030 5989 1539 148 14 11 chr20 20187663 20187947 -51965935 + L1MA9 LINE L1 6026 6310 -2 256 182 182 0 chr20 20187961 20188016 -51965866 + MER58A DNA MER1_type 7 71 -36 555 148 0 0 chr20 20189012 20189093 -51964789 - AluJ/FLAM SINE Alu -230 82 2 825 201 114 59 chr20 20189116 20189405 -51964477 - MLT1K LTR MaLR -272 316 12 1418 264 31 17 chr20 20189489 20189906 -51963976 - LTR16A LTR ERVL -13 437 15 325 239 43 43 chr20 20191088 20191180 -51962702 - L1MC4 LINE L1 -1339 6703 6612 188 146 49 0 chr20 20191184 20191225 -51962657 + (TATG)n Simple_repeat Simple_repeat 2 44 0 1961 128 0 0 chr20 20191226 20191533 -51962349 - AluSx SINE Alu 0 307 1 1130 223 45 9 chr20 20191632 20192115 -51961767 + MER34 LTR ERV1 11 542 0 1106 283 84 11 chr20 20192118 20192656 -51961226 - L1MC4 LINE L1 -1973 5835 5259 207 0 0 0 chr20 20192749 20192772 -51961110 + (A)n Simple_repeat Simple_repeat 1 23 0 228 227 34 23 chr20 20192902 20192990 -51960892 - MLT1J1 LTR MaLR 0 446 358 374 229 48 12 chr20 20193470 20193553 -51960329 + L2 LINE L2 3223 3308 -5 25 0 0 0 chr20 20194226 20194251 -51959631 + AT_rich Low_complexity Low_complexity 1 25 0 759 277 43 18 chr20 20194659 20194988 -51958894 - MER46C DNA MER2_type 0 338 2 233 269 0 0 chr20 20195013 20195080 -51958802 + CT-rich Low_complexity Low_complexity 1 67 0 513 216 178 38 chr20 20196073 20196286 -51957596 - MLT1H LTR MaLR -302 247 5 231 320 99 37 chr20 20196300 20196572 -51957310 - L1ME LINE L1 -508 5613 5325 2512 152 30 15 chr20 20196881 20197394 -51956488 + L1MA4 LINE L1 5617 6171 0 486 213 58 146 chr20 20197860 20197904 -51955978 + MLT2C1 LTR ERVL 28 74 -323 2536 166 46 65 chr20 20197904 20198469 -51955413 - MLT2B3 LTR ERVL 0 554 1 486 213 58 146 chr20 20198469 20198604 -51955278 + MLT2C1 LTR ERVL 74 219 -178 441 0 0 0 chr20 20198604 20198653 -51955229 + (TG)n Simple_repeat Simple_repeat 1 49 0 198 0 0 0 chr20 20198652 20198674 -51955208 + (GA)n Simple_repeat Simple_repeat 1 22 0 * 486 213 58 146 chr20 20198653 20198855 -51955027 + MLT2C1 LTR ERVL 219 357 -40 240 219 16 94 chr20 20201193 20201385 -51952497 + C-rich Low_complexity Low_complexity 3 179 0 237 282 0 42 chr20 20202711 20202782 -51951100 + G-rich Low_complexity Low_complexity 1 68 0 576 208 157 59 chr20 20203076 20203312 -51950570 - L1ME1 LINE L1 -6 6160 5902 440 248 26 0 chr20 20203334 20203451 -51950431 - MER69 DNA AcHobo -215 2311 2192 303 224 105 13 chr20 20203720 20203796 -51950086 - MER69 DNA AcHobo -2443 83 1 1779 187 171 78 chr20 20205821 20206544 -51947338 + LTR50 LTR ERVL 2 792 -3 221 204 0 23 chr20 20206850 20206894 -51946988 + MIR3 SINE MIR 151 193 -15 3305 122 27 0 chr20 20207984 20208468 -51945414 - LOR1a LTR ERV1 0 497 1 271 314 145 54 chr20 20209322 20209730 -51944152 + L2 LINE L2 2869 3313 0 234 167 37 0 chr20 20211798 20211852 -51942030 + A-rich Low_complexity Low_complexity 5 60 0 358 222 33 11 chr20 20213402 20213492 -51940390 - MIR3 SINE MIR -24 184 93 1279 143 125 5 chr20 20215591 20215807 -51938075 + AluJb SINE Alu 39 280 -32 351 0 0 0 chr20 20215807 20215846 -51938036 + (CAAT)n Simple_repeat Simple_repeat 4 42 0 477 219 225 28 chr20 20216807 20216985 -51936897 + MER20 DNA MER1_type 1 213 -6 2327 97 0 7 chr20 20217201 20217501 -51936381 - AluSx SINE Alu -14 298 1 307 190 160 20 chr20 20217505 20217605 -51936277 - L1MA10 LINE L1 -41 6293 6180 1255 272 25 11 chr20 20219008 20219376 -51934506 - L1ME3A LINE L1 -3 6167 5795 197 65 32 0 chr20 20219594 20219625 -51934257 + (TA)n Simple_repeat Simple_repeat 1 32 0 242 298 38 30 chr20 20222682 20222813 -51931069 - MIR SINE MIR -65 197 66 243 0 0 0 chr20 20222987 20223014 -51930868 + (TG)n Simple_repeat Simple_repeat 1 27 0 23 68 0 0 chr20 20223272 20223316 -51930566 + AT_rich Low_complexity Low_complexity 1 44 0 207 330 50 0 chr20 20223830 20223930 -51929952 - L2 LINE L2 0 3272 3168 267 291 74 139 chr20 20224087 20224166 -51929716 - L2 LINE L2 0 3272 3189 2318 113 0 3 chr20 20224166 20224477 -51929405 - AluSx SINE Alu -1 311 2 267 291 74 139 chr20 20224477 20224830 -51929052 - L2 LINE L2 -83 3189 2868 568 196 18 0 chr20 20225244 20225356 -51928526 - MER58 DNA MER1_type 0 2420 2307 1468 260 31 18 chr20 20225782 20226163 -51927719 - MLT1E2 LTR MaLR 0 626 241 1671 245 40 23 chr20 20226163 20226644 -51927238 + MER65B LTR ERV1 1 489 -42 300 220 144 17 chr20 20226674 20226775 -51927107 - MLT1E2 LTR MaLR -366 258 122 937 171 42 74 chr20 20227122 20227338 -51926544 + MER3 DNA MER1_type 1 209 0 23 0 0 0 chr20 20227415 20227438 -51926444 + AT_rich Low_complexity Low_complexity 1 23 0 1986 143 13 10 chr20 20227680 20227988 -51925894 + AluJb SINE Alu 1 309 -3 360 211 77 10 chr20 20228033 20228137 -51925745 - L1MC4a LINE L1 -1881 5927 5817 418 288 16 16 chr20 20228196 20228321 -51925561 + L2 LINE L2 3184 3308 -5 694 225 63 60 chr20 20228339 20228544 -51925338 - L1MC4a LINE L1 -523 5651 5512 309 186 22 125 chr20 20228935 20229093 -51924789 + MLT1E LTR MaLR 20 202 -347 589 243 21 21 chr20 20229137 20229281 -51924601 + MLT1H1 LTR MaLR 412 555 0 366 309 111 0 chr20 20230373 20230499 -51923383 + MIR SINE MIR 84 223 -39 229 208 104 0 chr20 20230797 20230845 -51923037 + Tigger5 DNA MER2_type 2271 2323 0 266 146 104 0 chr20 20231034 20231082 -51922800 + Tigger5 DNA MER2_type 2271 2323 0 2422 112 37 3 chr20 20231105 20231453 -51922429 - MER47A DNA MER2_type -1 365 6 2231 63 42 0 chr20 20231717 20232004 -51921878 + AluY SINE Alu 1 299 -12 2071 236 109 45 chr20 20235144 20235979 -51917903 + HAL1 LINE L1 1139 2026 -481 392 216 91 87 chr20 20236090 20236298 -51917584 + HAL1 LINE L1 2257 2465 -42 453 329 53 20 chr20 20236502 20236803 -51917079 - LTR16C LTR ERVL -70 421 111 262 270 29 6 chr20 20237514 20237688 -51916194 + (TA)n Simple_repeat Simple_repeat 1 178 0 23 33 0 0 chr20 20237709 20237739 -51916143 + AT_rich Low_complexity Low_complexity 1 30 0 1925 209 29 55 chr20 20238897 20239423 -51914459 + MLT2B1 LTR ERVL 2 513 -7 2397 82 0 13 chr20 20239556 20239862 -51914020 + AluY SINE Alu 1 302 -9 339 339 136 15 chr20 20239919 20240249 -51913633 + L2 LINE L2 2492 2861 -453 367 248 15 75 chr20 20240257 20240390 -51913492 + MER5A DNA MER1_type 63 187 -2 257 280 21 105 chr20 20240262 20240405 -51913477 - MER5A DNA MER1_type -56 133 3 * 1317 108 0 0 chr20 20240534 20240719 -51913163 - L1P LINE L1 -2668 3478 3294 1416 238 98 49 chr20 20240815 20241362 -51912520 + L1MC5 LINE L1 7274 7807 -154 228 67 0 0 chr20 20241362 20241392 -51912490 + (TG)n Simple_repeat Simple_repeat 1 30 0 1416 238 98 49 chr20 20241392 20241492 -51912390 + L1MC5 LINE L1 7807 7901 -60 233 255 0 0 chr20 20242617 20242668 -51911214 + T-rich Low_complexity Low_complexity 1 51 0 5815 186 77 23 chr20 20242816 20243803 -51910079 - L1MC1 LINE L1 -5 6328 5397 2284 96 20 0 chr20 20243803 20244095 -51909787 - AluSx SINE Alu -14 298 1 5815 186 77 23 chr20 20244095 20245169 -51908713 - L1MC1 LINE L1 -936 5397 4126 664 293 74 0 chr20 20245238 20245467 -51908415 - MIR SINE MIR 0 262 17 477 267 60 7 chr20 20245522 20245672 -51908210 - MIR SINE MIR -56 206 49 327 284 101 50 chr20 20245764 20246042 -51907840 - L2 LINE L2 -7 3306 3015 2034 206 44 76 chr20 20247302 20247553 -51906329 + MER90 LTR ERV1 69 326 -288 3446 119 65 0 chr20 20247553 20248092 -51905790 - L1MA4 LINE L1 -6 6294 5721 2034 206 44 76 chr20 20248092 20248404 -51905478 + MER90 LTR ERV1 326 614 0 289 265 0 0 chr20 20248875 20248943 -51904939 + (CAT)n Simple_repeat Simple_repeat 1 68 0 527 268 168 10 chr20 20248950 20249159 -51904723 - MIR SINE MIR -6 256 15 637 147 129 17 chr20 20249725 20249950 -51903932 + MER5C DNA MER1_type 1 321 -3 230 214 48 12 chr20 20250040 20250124 -51903758 + (TA)n Simple_repeat Simple_repeat 1 87 0 354 223 128 0 chr20 20250408 20250502 -51903380 + L2 LINE L2 3207 3312 -1 382 316 94 26 chr20 20250628 20250862 -51903020 + MIR SINE MIR 5 254 -8 381 184 0 26 chr20 20250877 20250953 -51902929 + MER116 DNA Mariner 7 80 0 210 337 0 56 chr20 20252031 20252120 -51901762 + L2 LINE L2 3186 3269 -3 2128 135 3 0 chr20 20253352 20253663 -51900219 + AluSx SINE Alu 1 312 0 252 331 123 8 chr20 20254654 20254784 -51899098 + MIR3 SINE MIR 11 155 -53 3224 244 25 14 chr20 20255575 20256428 -51897454 - L1ME3A LINE L1 -12 6158 5297 234 331 107 24 chr20 20256668 20256837 -51897045 + MIR SINE MIR 9 191 -71 246 314 76 0 chr20 20257483 20257588 -51896294 - MIR SINE MIR -55 153 41 364 197 0 0 chr20 20258245 20258311 -51895571 - MER116 DNA Mariner 0 80 15 3949 162 102 56 chr20 20260557 20261534 -51892348 + L1MC3 LINE L1 6745 7766 -19 2037 220 65 61 chr20 20261517 20262499 -51891383 + L1MCa LINE L1 10 995 -5050 * 662 239 91 68 chr20 20262729 20263432 -51890450 + HAL1b LINE L1 482 1341 -7 487 321 18 18 chr20 20263518 20263686 -51890196 + MIR3 SINE MIR 33 200 -8 229 182 0 30 chr20 20264313 20264379 -51889503 + L1P LINE L1 4644 4707 -1439 32 0 0 0 chr20 20264584 20264616 -51889266 + AT_rich Low_complexity Low_complexity 1 32 0 375 331 90 6 chr20 20266449 20266627 -51887255 + MIR3 SINE MIR 6 198 -10 8091 160 6 23 chr20 20266845 20269118 -51884764 + L1PB1 LINE L1 3541 5791 -360 267 257 0 0 chr20 20269124 20269198 -51884684 + (TA)n Simple_repeat Simple_repeat 2 75 0 2512 70 35 35 chr20 20269198 20269214 -51884668 + L1PB1 LINE L1 5781 5796 -355 306 0 0 0 chr20 20269214 20269248 -51884634 + (CA)n Simple_repeat Simple_repeat 2 35 0 2512 70 35 35 chr20 20269248 20269602 -51884280 + L1PB1 LINE L1 5795 6151 0 346 308 15 39 chr20 20269669 20269799 -51884083 + MER5A DNA MER1_type 40 166 -23 1794 160 99 0 chr20 20270780 20271112 -51882770 - MLT1A1 LTR MaLR 0 365 1 248 161 21 97 chr20 20272671 20272764 -51881118 + L1ME LINE L1 5675 5760 -402 347 342 114 18 chr20 20274285 20274513 -51879369 + MIR SINE MIR 5 254 -8 247 284 69 10 chr20 20274977 20275079 -51878803 + L2 LINE L2 2260 2367 -947 773 297 150 11 chr20 20275084 20275605 -51878277 + L2 LINE L2 2650 3238 -75 203 229 92 64 chr20 20275938 20276047 -51877835 + L2 LINE L2 2996 3107 -206 183 350 77 26 chr20 20276124 20276241 -51877641 + L2 LINE L2 3160 3282 -31 2005 161 121 3 chr20 20276693 20277073 -51876809 + MSTB LTR MaLR 2 426 0 27 49 0 0 chr20 20278211 20278252 -51875630 + AT_rich Low_complexity Low_complexity 1 41 0 458 381 63 15 chr20 20278688 20279163 -51874719 + L2 LINE L2 2223 2720 -594 255 269 43 14 chr20 20279656 20279797 -51874085 - MER113 DNA MER1_type? -376 145 1 3110 279 257 25 chr20 20280183 20282657 -51871225 + L2 LINE L2 230 3287 -26 883 193 56 5 chr20 20283295 20283492 -51870390 - MER6B DNA MER2_type -3 207 1 281 271 59 41 chr20 20283783 20283953 -51869929 - MER5A DNA MER1_type -16 173 1 234 308 0 0 chr20 20284489 20284541 -51869341 - L2 LINE L2 -13 3259 3208 201 211 41 130 chr20 20288756 20288879 -51865003 + MIR SINE MIR 105 216 -46 375 319 9 18 chr20 20289114 20289227 -51864655 + MIR SINE MIR 31 142 -120 269 169 236 0 chr20 20290499 20290567 -51863315 + MIR SINE MIR 70 142 -66 515 269 74 12 chr20 20291566 20291808 -51862074 - Charlie8 DNA MER1_type -2146 271 4 203 238 0 0 chr20 20292672 20292714 -51861168 + GA-rich Low_complexity Low_complexity 1 42 0 1195 223 36 31 chr20 20294016 20294439 -51859443 + L1ME2 LINE L1 5750 6333 -1 653 243 96 0 chr20 20295628 20295805 -51858077 - MIR SINE MIR -2 260 67 390 193 37 9 chr20 20296231 20296340 -51857542 + MER113 DNA MER1_type? 5 116 -405 315 0 0 0 chr20 20296623 20296658 -51857224 + (CA)n Simple_repeat Simple_repeat 2 36 0 2221 92 0 7 chr20 20296809 20297101 -51856781 + AluSg SINE Alu 1 290 -20 253 327 103 51 chr20 20297472 20297628 -51856254 - MIR3 SINE MIR -16 192 29 583 198 18 0 chr20 20298119 20298230 -51855652 + MER81 DNA DNA 2 114 0 635 277 95 16 chr20 20299369 20299611 -51854271 - MIR SINE MIR 0 262 2 2096 118 0 0 chr20 20300053 20300349 -51853533 + AluY SINE Alu 1 296 -15 186 289 155 11 chr20 20300634 20300729 -51853153 + MIR SINE MIR 45 151 -75 216 296 0 0 chr20 20301049 20301103 -51852779 - L2 LINE L2 -20 3252 3199 2087 174 72 8 chr20 20301303 20301705 -51852177 + MSTA LTR MaLR 1 428 0 180 0 0 0 chr20 20301800 20301820 -51852062 + (A)n Simple_repeat Simple_repeat 1 20 0 396 294 90 77 chr20 20305102 20305479 -51848403 + L3 LINE CR1 1078 1459 -118 299 203 13 0 chr20 20305693 20305772 -51848110 + MLT1I LTR MaLR 58 137 -272 30 45 0 0 chr20 20307355 20307399 -51846483 + AT_rich Low_complexity Low_complexity 1 44 0 22 0 0 0 chr20 20311606 20311628 -51842254 + AT_rich Low_complexity Low_complexity 1 22 0 225 125 0 0 chr20 20311969 20312001 -51841881 - L2 LINE L2 -22 3250 3219 2192 127 3 13 chr20 20313450 20313764 -51840118 + AluSx SINE Alu 1 311 -1 2122 118 0 0 chr20 20314855 20315143 -51838739 - AluSq SINE Alu -25 288 1 723 238 32 83 chr20 20315909 20316161 -51837721 - MER8 DNA MER2_type 0 239 1 216 315 141 49 chr20 20316577 20316761 -51837121 - L2 LINE L2 0 3272 3072 339 274 66 0 chr20 20317366 20317492 -51836390 + MIR3 SINE MIR 67 201 -7 371 275 85 50 chr20 20318065 20318277 -51835605 + MIR SINE MIR 6 233 -29 1640 169 7 4 chr20 20319423 20319558 -51834324 + AluJo SINE Alu 1 134 -178 225 0 0 0 chr20 20319558 20319583 -51834299 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 1640 169 7 4 chr20 20319583 20319725 -51834157 + AluJo SINE Alu 134 279 -33 262 246 43 0 chr20 20319726 20319795 -51834087 - MIR3 SINE MIR -48 160 89 280 247 33 27 chr20 20320368 20320621 -51833261 + GA-rich Low_complexity Low_complexity 1 254 0 22 0 0 0 chr20 20322472 20322494 -51831388 + AT_rich Low_complexity Low_complexity 1 22 0 222 37 0 0 chr20 20324290 20324317 -51829565 + (GA)n Simple_repeat Simple_repeat 1 27 0 824 174 15 0 chr20 20325148 20325280 -51828602 - AluJb SINE Alu -21 291 158 532 327 31 18 chr20 20325302 20325528 -51828354 - MIR SINE MIR -17 245 17 236 304 304 0 chr20 20326107 20326245 -51827637 - MIR SINE MIR -71 191 12 279 277 143 87 chr20 20326315 20326546 -51827336 - L2 LINE L2 -17 3255 3012 207 349 147 22 chr20 20326612 20326844 -51827038 - L2 LINE L2 -457 2857 2597 273 348 22 0 chr20 20326938 20327027 -51826855 + L2 LINE L2 3143 3233 -39 2351 94 0 0 chr20 20327060 20327357 -51826525 + AluSq SINE Alu 1 297 -16 224 226 21 86 chr20 20327456 20327549 -51826333 - L2 LINE L2 -787 2527 2441 316 287 118 15 chr20 20327634 20327770 -51826112 + MIR SINE MIR 80 229 -33 313 270 189 0 chr20 20327922 20328033 -51825849 - MIR SINE MIR -6 256 125 502 358 76 40 chr20 20328118 20328699 -51825183 - L2 LINE L2 -955 2359 1758 284 325 118 18 chr20 20328869 20329038 -51824844 + MIR SINE MIR 7 192 -70 915 229 41 0 chr20 20331340 20331510 -51822372 + MER45A DNA AcHobo 2 178 0 23 0 0 0 chr20 20332419 20332442 -51821440 + AT_rich Low_complexity Low_complexity 1 23 0 223 291 94 16 chr20 20332649 20332776 -51821106 - MIR3 SINE MIR -59 149 13 226 275 257 37 chr20 20333535 20333909 -51819973 - L2 LINE L2 -40 3273 2818 293 222 86 34 chr20 20335165 20335282 -51818600 + L1ME4a LINE L1 5830 5952 -169 419 318 38 101 chr20 20335766 20336084 -51817798 - L2 LINE L2 -64 3208 2911 1092 104 0 0 chr20 20337322 20337528 -51816354 + (GGGGA)n Simple_repeat Simple_repeat 1 206 0 394 267 95 61 chr20 20338008 20338270 -51815612 + L1ME4a LINE L1 5513 5783 -338 1176 138 19 38 chr20 20338303 20338513 -51815369 + MER1B DNA MER1_type 134 339 0 312 278 73 104 chr20 20338516 20338843 -51815039 + L1ME4a LINE L1 5777 6093 -28 410 339 119 45 chr20 20340068 20340472 -51813410 - L2 LINE L2 -10 3262 2829 197 323 148 32 chr20 20341501 20341656 -51812226 + L2 LINE L2 3098 3270 -2 290 275 76 72 chr20 20341838 20342089 -51811793 + L2 LINE L2 2346 2597 -717 3566 171 70 12 chr20 20342426 20343117 -51810765 + L1MB3 LINE L1 5413 6143 -40 800 299 148 33 chr20 20343822 20344597 -51809285 + L2 LINE L2 2373 3309 -4 199 352 99 14 chr20 20344683 20344896 -51808986 - L2 LINE L2 -214 3058 2828 184 333 97 0 chr20 20345818 20345890 -51807992 + MIR3 SINE MIR 113 191 -17 333 231 231 0 chr20 20346145 20346253 -51807629 + MIR SINE MIR 124 256 -6 279 197 53 77 chr20 20346339 20346482 -51807400 - MIR SINE MIR -5 203 72 316 246 169 35 chr20 20349300 20349442 -51804440 + L3 LINE CR1 1348 1508 -69 622 287 77 45 chr20 20349895 20350205 -51803677 + MER102b DNA MER1_type 1 320 -21 291 377 0 0 chr20 20350218 20350324 -51803558 + L2 LINE L2 2253 2358 -956 529 271 19 26 chr20 20351060 20351215 -51802667 - L2 LINE L2 -5 3308 3155 782 371 45 19 chr20 20351419 20352061 -51801821 - L2 LINE L2 -383 2931 2273 332 300 0 0 chr20 20352098 20352188 -51801694 + L1MC4 LINE L1 6614 6703 -1339 238 311 0 0 chr20 20352198 20352288 -51801594 + L1MC4 LINE L1 6614 6703 -1339 209 143 0 41 chr20 20352293 20352342 -51801540 + (CATATA)n Simple_repeat Simple_repeat 5 51 0 229 275 0 44 chr20 20352342 20352433 -51801449 + L1MC4 LINE L1 6614 6700 -1342 342 67 0 0 chr20 20352435 20352445 -51801437 + (TG)n Simple_repeat Simple_repeat 1 55 0 342 67 0 0 chr20 20352445 20352490 -51801392 + (TG)n Simple_repeat Simple_repeat 2 46 0 2283 119 9 6 chr20 20352533 20352878 -51801004 - Tigger4(Zombi) DNA MER2_type 0 2731 2386 7526 140 26 11 chr20 20352878 20354075 -51799807 - Tigger4(Zombi) DNA MER2_type -1513 1218 4 387 0 0 0 chr20 20354075 20354118 -51799764 + (TG)n Simple_repeat Simple_repeat 1 43 0 406 339 140 23 chr20 20354180 20354566 -51799316 - L2 LINE L2 -1154 2160 1730 2633 108 30 14 chr20 20354573 20354942 -51798940 - THE1C LTR MaLR 0 375 1 339 260 87 29 chr20 20355119 20355223 -51798659 + MIR3 SINE MIR 84 193 -15 26 50 0 0 chr20 20356117 20356157 -51797725 + AT_rich Low_complexity Low_complexity 1 40 0 490 167 13 0 chr20 20356949 20357027 -51796855 + Tigger5 DNA MER2_type 1 79 -2244 * 1503 135 74 0 chr20 20357016 20357246 -51796636 + Tigger5 DNA MER2_type 2077 2323 0 2926 127 28 1 chr20 20358091 20358597 -51795285 - L1P LINE L1 -743 5403 4910 2321 58 44 0 chr20 20358597 20358884 -51794998 + L1PA10 LINE L1 5862 6168 0 1274 226 82 59 chr20 20359484 20360292 -51793590 + L1MDb LINE L1 786 1619 -4787 4178 161 29 6 chr20 20360445 20361143 -51792739 + MER72 LTR ERV1 9 722 0 718 193 113 0 chr20 20361144 20361294 -51792588 - MER5A DNA MER1_type -21 168 2 21 0 0 0 chr20 20361892 20361913 -51791969 + AT_rich Low_complexity Low_complexity 1 21 0 216 0 0 0 chr20 20362843 20362867 -51791015 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 361 321 120 45 chr20 20364851 20365587 -51788295 + L1 LINE L1 4443 5233 -913 223 146 49 0 chr20 20366401 20366442 -51787440 + (TGGA)n Simple_repeat Simple_repeat 3 45 0 2722 205 96 55 chr20 20366968 20367945 -51785937 + L1MC4 LINE L1 6489 7505 -537 1812 123 148 13 chr20 20367945 20368318 -51785564 - MSTA LTR MaLR -5 423 1 286 108 44 58 chr20 20368319 20368400 -51785482 + L1MD3 LINE L1 7388 7673 -322 253 31 0 0 chr20 20368407 20368439 -51785443 - MSTA LTR MaLR -396 32 1 681 288 158 0 chr20 20368463 20368786 -51785096 + L1MC4 LINE L1 7523 7896 -146 294 158 0 0 chr20 20368794 20368851 -51785031 + L1MC4 LINE L1 7986 8042 0 24 32 0 0 chr20 20368904 20368935 -51784947 + AT_rich Low_complexity Low_complexity 1 31 0 306 50 0 0 chr20 20370320 20370360 -51783522 + MADE1 DNA Mariner 1 40 -40 652 272 111 29 chr20 20372479 20372821 -51781061 + L2 LINE L2 1491 1860 -1454 1483 240 93 113 chr20 20372828 20373652 -51780230 + L2 LINE L2 2154 2961 -353 610 222 111 0 chr20 20373702 20373855 -51780027 - MER20 DNA MER1_type -1 218 49 251 254 101 83 chr20 20373864 20374059 -51779823 + L2 LINE L2 2970 3171 -142 258 32 0 0 chr20 20374059 20374090 -51779792 + (CA)n Simple_repeat Simple_repeat 2 32 0 251 254 101 83 chr20 20374090 20374122 -51779760 + L2 LINE L2 3171 3201 -112 22 0 0 0 chr20 20374905 20374927 -51778955 + AT_rich Low_complexity Low_complexity 1 22 0 369 86 0 0 chr20 20375726 20375784 -51778098 + (CA)n Simple_repeat Simple_repeat 2 59 0 222 294 92 46 chr20 20376503 20376612 -51777270 + L2 LINE L2 3198 3311 -2 235 375 50 8 chr20 20376722 20376842 -51777040 + L2 LINE L2 3136 3260 -12 347 224 229 52 chr20 20377139 20377349 -51776533 - HAL1b LINE L1 -203 1145 899 939 256 58 83 chr20 20377351 20377871 -51776011 - HAL1b LINE L1 -768 580 74 1621 134 11 0 chr20 20379063 20379325 -51774557 + MER2 DNA MER2_type 1 265 -80 401 215 38 0 chr20 20379370 20379449 -51774433 + MER2 DNA MER2_type 264 345 0 2046 122 0 45 chr20 20379996 20380307 -51773575 + AluSx SINE Alu 1 297 -15 1633 167 52 6 chr20 20380393 20380717 -51773165 + MER44D DNA MER2_type 1 609 0 207 86 0 29 chr20 20381075 20381110 -51772772 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 809 295 229 6 chr20 20381260 20381731 -51772151 + L2 LINE L2 2448 3016 -297 2056 122 78 23 chr20 20381762 20382107 -51771775 - THE1B LTR MaLR 0 364 1 486 75 0 0 chr20 20382664 20382731 -51771151 + (CA)n Simple_repeat Simple_repeat 2 68 0 262 257 152 0 chr20 20383715 20383820 -51770062 + MER5B DNA MER1_type 50 170 -8 315 318 24 0 chr20 20383938 20384023 -51769859 - L2 LINE L2 -4 3309 3223 475 219 10 0 chr20 20384128 20384224 -51769658 - Tigger3(Golem) DNA MER2_type 0 3029 2933 1254 147 20 32 chr20 20384231 20384483 -51769399 + L1MA8 LINE L1 5972 6220 -71 180 0 0 0 chr20 20384494 20384514 -51769368 + (TA)n Simple_repeat Simple_repeat 1 20 0 208 109 22 22 chr20 20384546 20384592 -51769290 + (TA)n Simple_repeat Simple_repeat 1 46 0 22 0 0 0 chr20 20384606 20384628 -51769254 + AT_rich Low_complexity Low_complexity 1 22 0 204 193 53 35 chr20 20384966 20385023 -51768859 + GA-rich Low_complexity Low_complexity 6 63 0 769 204 0 0 chr20 20385145 20385287 -51768595 + MER46A DNA MER2_type 3 144 -92 534 219 45 32 chr20 20386315 20386421 -51767461 + L1ME LINE L1 5548 5658 -512 1060 248 32 30 chr20 20386421 20386760 -51767122 + MER58B DNA MER1_type 2 341 0 534 219 45 32 chr20 20386760 20386808 -51767074 + L1ME LINE L1 5658 5704 -466 273 279 0 78 chr20 20386802 20386956 -51766926 - L1MC/D LINE L1 -1985 5823 5682 * 1015 165 24 0 chr20 20387201 20387371 -51766511 + FRAM SINE Alu 1 174 -2 234 0 0 0 chr20 20387565 20387591 -51766291 + (TG)n Simple_repeat Simple_repeat 2 27 0 834 246 99 4 chr20 20387873 20388145 -51765737 + MER5C DNA MER1_type 14 311 -13 740 167 38 8 chr20 20389637 20389769 -51764113 + AluJo SINE Alu 1 136 -176 651 183 0 78 chr20 20389970 20390112 -51763770 + FLAM_A SINE Alu 1 131 -2 235 200 0 93 chr20 20390722 20390872 -51763010 + (CAA)n Simple_repeat Simple_repeat 2 137 0 249 33 0 0 chr20 20391022 20391052 -51762830 + (GA)n Simple_repeat Simple_repeat 2 31 0 362 243 21 71 chr20 20391193 20391333 -51762549 + L1MEd LINE L1 1052 1184 -4935 27 0 0 0 chr20 20391414 20391441 -51762441 + AT_rich Low_complexity Low_complexity 1 27 0 330 289 33 33 chr20 20391691 20391871 -51762011 + HAL1b LINE L1 633 812 -536 254 274 74 91 chr20 20392701 20392876 -51761006 + L2 LINE L2 3076 3247 -25 2567 68 0 0 chr20 20394699 20395009 -51758873 + AluY SINE Alu 1 310 -1 1246 181 10 10 chr20 20395211 20395415 -51758467 + AluJo SINE Alu 81 284 -28 657 258 143 61 chr20 20395762 20396389 -51757493 + L1MC4 LINE L1 5301 5979 -1829 266 244 12 0 chr20 20396500 20396582 -51757300 + (TA)n Simple_repeat Simple_repeat 2 84 0 431 277 230 9 chr20 20396971 20397184 -51756698 + L1MC4 LINE L1 6672 6931 -854 22 0 0 0 chr20 20397342 20397364 -51756518 + AT_rich Low_complexity Low_complexity 1 22 0 836 154 0 0 chr20 20397374 20397491 -51756391 - FLAM_C SINE Alu -16 117 1 24 53 0 0 chr20 20397507 20397545 -51756337 + AT_rich Low_complexity Low_complexity 1 38 0 231 304 18 9 chr20 20397613 20397725 -51756157 + L1MC4 LINE L1 7122 7234 -808 558 0 0 0 chr20 20398242 20398304 -51755578 + (CAATA)n Simple_repeat Simple_repeat 1 62 0 345 311 19 10 chr20 20398754 20398857 -51755025 - MIR SINE MIR -156 106 3 189 330 179 9 chr20 20398898 20399004 -51754878 + L2 LINE L2 1145 1268 -2046 284 250 16 0 chr20 20400811 20400875 -51753007 + GA-rich Low_complexity Low_complexity 4 68 0 315 104 0 0 chr20 20400893 20400941 -51752941 + (CA)n Simple_repeat Simple_repeat 2 49 0 180 167 95 24 chr20 20401384 20401426 -51752456 - L2 LINE L2 -92 3221 3177 1903 120 69 0 chr20 20402444 20402720 -51751162 + AluSx SINE Alu 1 295 -17 21 36 0 0 chr20 20403203 20403231 -51750651 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr20 20403350 20403371 -51750511 + AT_rich Low_complexity Low_complexity 1 21 0 22 56 0 0 chr20 20403653 20403689 -51750193 + AT_rich Low_complexity Low_complexity 1 36 0 1039 220 132 44 chr20 20404074 20404112 -51749770 + Charlie2 DNA MER1_type 68 101 -2681 2159 108 28 0 chr20 20404112 20404398 -51749484 + AluSq SINE Alu 1 294 -19 1039 220 132 44 chr20 20404398 20404745 -51749137 + Charlie2 DNA MER1_type 101 487 -2295 2021 183 25 129 chr20 20404774 20405457 -51748425 + LTR9 LTR ERV1 1 612 0 293 247 49 0 chr20 20405575 20405656 -51748226 + Charlie2a DNA MER1_type 1464 1548 -1314 1543 203 27 8 chr20 20405751 20406126 -51747756 + Charlie2a DNA MER1_type 1735 2116 -746 1600 245 67 16 chr20 20406159 20406800 -51747082 + Charlie2a DNA MER1_type 2189 2862 0 21 0 0 0 chr20 20407911 20407932 -51745950 + AT_rich Low_complexity Low_complexity 1 21 0 251 305 58 71 chr20 20407964 20408118 -51745764 + L2 LINE L2 3160 3311 -2 4161 155 48 73 chr20 20408345 20408512 -51745370 + L1MCa LINE L1 20 190 -6236 2831 83 3 0 chr20 20408512 20408875 -51745007 + THE1B LTR MaLR 1 364 0 4161 155 48 73 chr20 20408875 20409731 -51744151 + L1MCa LINE L1 190 1017 -5409 901 158 42 42 chr20 20409720 20409935 -51743947 + L1MCa LINE L1 1458 1672 -4754 * 382 196 0 0 chr20 20409926 20410018 -51743864 + L1MCa LINE L1 1880 1971 -4455 * 2462 218 37 15 chr20 20410017 20410435 -51743447 + L1MCa LINE L1 2259 2666 -3760 2294 111 0 13 chr20 20410435 20410751 -51743131 + AluSx SINE Alu 1 312 0 2462 218 37 15 chr20 20410751 20411120 -51742762 + L1MCa LINE L1 2666 3025 -3401 1988 147 3 10 chr20 20411120 20411426 -51742456 + AluJo SINE Alu 5 308 -4 2462 218 37 15 chr20 20411426 20411773 -51742109 + L1MCa LINE L1 3025 3422 -3004 4521 160 17 36 chr20 20411773 20412619 -51741263 + L1MC1 LINE L1 5446 6277 -56 1721 146 3 48 chr20 20412619 20412942 -51740940 - AluJb SINE Alu 0 310 1 4521 160 17 36 chr20 20412942 20412981 -51740901 + L1MC1 LINE L1 6277 6315 -18 765 220 77 10 chr20 20414226 20414435 -51739447 + MER58A DNA MER1_type 1 223 -1 367 275 46 15 chr20 20414440 20414571 -51739311 - MIR SINE MIR -38 224 90 207 0 0 0 chr20 20414699 20414722 -51739160 + (A)n Simple_repeat Simple_repeat 1 23 0 308 294 39 0 chr20 20415375 20415477 -51738405 - MER103 DNA DNA -50 116 11 272 222 0 16 chr20 20415526 20415589 -51738293 - L2 LINE L2 -3 3269 3208 270 356 11 78 chr20 20415707 20415898 -51737984 + MIR3 SINE MIR 19 196 -12 500 236 137 12 chr20 20416413 20416574 -51737308 + MIR SINE MIR 63 243 -19 276 318 123 49 chr20 20416590 20417036 -51736846 + MLT1J LTR MaLR 33 511 0 180 302 0 0 chr20 20417131 20417184 -51736698 + L2 LINE L2 3219 3271 -1 962 232 54 5 chr20 20417362 20417586 -51736296 - MIR SINE MIR -20 242 8 2278 79 34 0 chr20 20418900 20419192 -51734690 - AluSc SINE Alu -7 302 1 265 317 101 10 chr20 20419213 20419328 -51734554 + MIR SINE MIR 3 130 -78 199 274 65 0 chr20 20419379 20419441 -51734441 + MIR3 SINE MIR 140 205 -3 822 256 32 24 chr20 20420378 20420563 -51733319 + L1ME3A LINE L1 5412 5594 -576 2566 173 104 2 chr20 20420563 20421061 -51732821 + MER44D DNA MER2_type 2 605 0 822 256 32 24 chr20 20421061 20421282 -51732600 + L1ME3A LINE L1 5594 5812 -358 2774 112 2 15 chr20 20421282 20421676 -51732206 + L1PA10 LINE L1 5774 6162 -6 822 256 32 24 chr20 20421676 20421709 -51732173 + L1ME3A LINE L1 5812 5843 -327 2148 154 42 9 chr20 20421709 20422046 -51731836 + MER7A DNA MER2_type 1 346 0 822 256 32 24 chr20 20422046 20422292 -51731590 + L1ME3A LINE L1 5843 6150 -20 409 348 7 14 chr20 20422494 20422632 -51731250 - MIR3 SINE MIR -30 178 42 418 240 47 8 chr20 20422813 20422942 -51730940 + L1ME3 LINE L1 6028 6161 -1 220 337 20 10 chr20 20423228 20423329 -51730553 - MER5A DNA MER1_type -50 139 38 1826 146 21 0 chr20 20423356 20423636 -51730246 - AluJo SINE Alu -26 286 1 350 288 135 18 chr20 20424020 20424190 -51729692 - MIR SINE MIR -15 247 58 276 271 47 78 chr20 20425002 20425131 -51728751 + MLT1K LTR MaLR 88 212 -376 382 306 163 22 chr20 20425132 20425488 -51728394 + MLT1K LTR MaLR 155 560 -28 265 328 132 0 chr20 20425725 20425899 -51727983 - MIR SINE MIR -21 241 45 318 250 225 48 chr20 20427132 20427488 -51726394 + MLT1H LTR MaLR 107 525 -24 270 250 0 0 chr20 20427849 20427905 -51725977 - L2 LINE L2 -71 3242 3187 227 234 0 0 chr20 20428000 20428064 -51725818 - L1MC4 LINE L1 -1339 6703 6640 505 237 25 0 chr20 20428311 20428429 -51725453 + L2 LINE L2 3191 3311 -2 209 250 0 0 chr20 20428429 20428473 -51725409 + GA-rich Low_complexity Low_complexity 1 44 0 2301 96 3 0 chr20 20429117 20429408 -51724474 + AluY SINE Alu 1 292 -19 807 276 100 0 chr20 20431092 20431433 -51722449 - LTR33A LTR ERVL 0 523 149 1922 152 0 0 chr20 20431582 20431858 -51722024 + AluJb SINE Alu 23 298 -14 431 213 213 24 chr20 20431865 20431992 -51721890 - MER5A DNA MER1_type -8 181 31 2226 139 7 89 chr20 20432232 20432415 -51721467 + MLT1B LTR MaLR 1 131 -259 2009 122 23 10 chr20 20432415 20432718 -51721164 + AluSq SINE Alu 5 311 -2 2226 139 7 89 chr20 20432718 20432959 -51720923 + MLT1B LTR MaLR 131 390 0 1813 183 0 3 chr20 20437841 20438136 -51715746 - AluJb SINE Alu -18 294 1 21 36 0 0 chr20 20438891 20438919 -51714963 + AT_rich Low_complexity Low_complexity 1 28 0 405 296 114 48 chr20 20440643 20441001 -51712881 - L1MC4 LINE L1 -1879 5929 5548 208 293 28 57 chr20 20441614 20441720 -51712162 + L2 LINE L2 3210 3312 -1 248 315 99 0 chr20 20442132 20442243 -51711639 - L1MC4 LINE L1 -2241 5567 5446 254 209 19 114 chr20 20442253 20442358 -51711524 - L1ME2 LINE L1 -1 6163 6067 287 284 28 18 chr20 20442365 20442474 -51711408 - L1MC4 LINE L1 -2384 5424 5315 345 298 62 45 chr20 20443223 20443401 -51710481 + L1ME LINE L1 5386 5566 -600 2198 240 39 28 chr20 20443521 20444167 -51709715 + L1ME3A LINE L1 5517 6169 -1 2068 117 20 7 chr20 20445078 20445377 -51708505 + AluSx SINE Alu 1 303 -9 241 203 54 40 chr20 20447267 20447341 -51706541 + GA-rich Low_complexity Low_complexity 1 75 0 1837 145 10 26 chr20 20448958 20449261 -51704621 + AluJb SINE Alu 1 298 -14 446 231 94 62 chr20 20450376 20450536 -51703346 + MIR SINE MIR 7 171 -91 2128 174 0 21 chr20 20450540 20450880 -51703002 - MER1B DNA MER1_type -4 333 1 1450 282 79 36 chr20 20451177 20451964 -51701918 - L1MC4a LINE L1 -745 5401 5151 21 0 0 0 chr20 20452095 20452116 -51701766 + AT_rich Low_complexity Low_complexity 1 21 0 2254 102 0 0 chr20 20452515 20452808 -51701074 + AluSg1 SINE Alu 1 293 -16 22 0 0 0 chr20 20453453 20453475 -51700407 + AT_rich Low_complexity Low_complexity 1 22 0 626 249 28 28 chr20 20453784 20453814 -51700068 - MIR SINE MIR -12 250 221 1072 183 0 83 chr20 20453814 20454014 -51699868 + MER6B DNA MER2_type 1 181 -684 2073 131 14 0 chr20 20454014 20454304 -51699578 + AluSx SINE Alu 1 294 -18 1072 183 0 83 chr20 20454304 20454332 -51699550 + MER6B DNA MER2_type 181 210 0 626 249 28 28 chr20 20454332 20454482 -51699400 - MIR SINE MIR -40 222 70 2356 101 0 3 chr20 20455522 20455829 -51698053 + AluSq SINE Alu 1 306 -7 231 88 0 0 chr20 20456718 20456752 -51697130 + (A)n Simple_repeat Simple_repeat 1 34 0 2368 92 16 0 chr20 20456754 20457060 -51696822 + AluSx SINE Alu 1 311 -1 21 57 0 0 chr20 20457208 20457243 -51696639 + AT_rich Low_complexity Low_complexity 1 35 0 637 266 6 12 chr20 20458884 20459057 -51694825 + MER5B DNA MER1_type 1 172 -6 336 263 132 13 chr20 20459560 20459712 -51694170 - MIR SINE MIR -46 216 47 238 349 83 12 chr20 20461172 20461341 -51692541 + MIR SINE MIR 76 256 -6 777 167 25 0 chr20 20461438 20461558 -51692324 - FLAM_A SINE Alu -10 123 1 535 225 146 13 chr20 20461684 20461835 -51692047 - MER5A DNA MER1_type -6 183 13 14070 106 9 29 chr20 20461860 20465049 -51688833 + L1PA7 LINE L1 1 3187 -3274 10013 59 7 2 chr20 20465045 20467332 -51686550 + L1PA7 LINE L1 4170 6469 0 * 33 0 0 0 chr20 20468462 20468495 -51685387 + AT_rich Low_complexity Low_complexity 1 33 0 251 239 70 0 chr20 20468661 20468732 -51685150 - MER91C DNA MER1_type -26 114 39 1107 169 0 0 chr20 20469710 20469887 -51683995 - AluJb SINE Alu 0 312 136 345 252 27 68 chr20 20471117 20471264 -51682618 + L1MC5 LINE L1 5767 5907 -1901 359 295 150 42 chr20 20471337 20471815 -51682067 + L1MC5 LINE L1 6037 6678 -1215 2167 105 3 14 chr20 20471815 20472109 -51681773 + AluSp SINE Alu 1 291 -22 359 295 150 42 chr20 20472109 20472297 -51681585 + L1MC5 LINE L1 6678 6844 -1049 968 221 94 114 chr20 20472352 20472837 -51681045 + MLT1F1 LTR MaLR 1 500 -67 1870 168 3 3 chr20 20472837 20473146 -51680736 - AluJo SINE Alu -3 309 1 968 221 94 114 chr20 20473146 20473213 -51680669 + MLT1F1 LTR MaLR 500 567 0 1890 218 84 79 chr20 20473220 20473969 -51679913 + L1MC5 LINE L1 6850 7606 -355 2018 102 4 0 chr20 20473969 20474233 -51679649 + AluSq SINE Alu 38 302 -11 1890 218 84 79 chr20 20474233 20474422 -51679460 + L1MC5 LINE L1 7606 7793 -168 501 231 167 6 chr20 20475430 20475586 -51678296 + MER5A DNA MER1_type 9 189 0 22 0 0 0 chr20 20475694 20475716 -51678166 + AT_rich Low_complexity Low_complexity 1 22 0 30 0 0 0 chr20 20476089 20476119 -51677763 + AT_rich Low_complexity Low_complexity 1 30 0 2144 110 24 0 chr20 20476124 20476416 -51677466 + AluSq SINE Alu 1 299 -14 6725 172 32 6 chr20 20476537 20477794 -51676088 - L1MA4A LINE L1 -864 5282 3994 5901 112 46 8 chr20 20477797 20478757 -51675125 + L1MA4A LINE L1 5301 6296 -7 227 273 51 74 chr20 20479197 20479453 -51674429 + L2 LINE L2 2632 2881 -433 326 293 23 15 chr20 20479541 20479674 -51674208 + L2 LINE L2 3179 3312 -1 2139 144 3 6 chr20 20479836 20480149 -51673733 - AluSx SINE Alu 0 312 1 2201 156 43 19 chr20 20480858 20481275 -51672607 + MSTA LTR MaLR 1 427 -1 2413 143 13 0 chr20 20481277 20481649 -51672233 + MSTA-int LTR MaLR 2 378 -1273 1631 130 58 0 chr20 20481649 20481910 -51671972 + MSTA LTR MaLR 153 428 0 316 161 65 54 chr20 20482921 20483014 -51670868 - MER53 DNA DNA -1 188 95 978 276 10 7 chr20 20483784 20484074 -51669808 - LTR16A LTR ERVL -2 448 158 312 349 60 7 chr20 20484302 20484451 -51669431 + L3 LINE CR1 1356 1512 -65 701 296 87 35 chr20 20484452 20485094 -51668788 - L2 LINE L2 0 3313 2621 197 263 189 0 chr20 20485196 20485291 -51668591 + MER5A DNA MER1_type 77 189 0 929 186 5 59 chr20 20485516 20485720 -51668162 - MER105 DNA DNA -11 193 1 234 280 20 60 chr20 20485956 20486056 -51667826 - MIR SINE MIR -64 144 49 274 291 78 82 chr20 20486283 20486473 -51667409 + L2 LINE L2 2836 3025 -247 2204 122 10 0 chr20 20486473 20486777 -51667105 + AluSq SINE Alu 1 307 -6 274 291 78 82 chr20 20486777 20486998 -51666884 + L2 LINE L2 3025 3245 -27 243 0 0 0 chr20 20487000 20487027 -51666855 + (TGAA)n Simple_repeat Simple_repeat 4 30 0 850 173 0 0 chr20 20487394 20487527 -51666355 + AluSq/x SINE Alu 1 133 -180 2285 106 0 0 chr20 20487528 20487820 -51666062 + AluSx SINE Alu 1 292 -20 216 284 90 0 chr20 20488319 20488386 -51665496 + MIR SINE MIR 47 119 -143 433 268 39 8 chr20 20488544 20488671 -51665211 - L2 LINE L2 -1 3312 3182 2123 114 0 0 chr20 20488909 20489222 -51664660 - AluSx SINE Alu 0 313 1 471 228 26 0 chr20 20490021 20490135 -51663747 + MER5B DNA MER1_type 6 122 -56 1547 168 26 68 chr20 20490529 20490881 -51663001 + MER1B DNA MER1_type 1 337 0 4870 17 0 0 chr20 20491187 20491730 -51662152 - L1PA2 LINE L1 -2 6153 5611 5742 18 0 7 chr20 20491730 20492627 -51661255 + L1PA2 LINE L1 4729 5619 -536 2001 141 16 7 chr20 20492671 20492976 -51660906 - AluJb SINE Alu -4 308 1 351 200 47 12 chr20 20493030 20493115 -51660767 + Charlie8 DNA MER1_type 69 156 -2261 2278 105 10 0 chr20 20493269 20493574 -51660308 - AluSq SINE Alu -5 308 1 345 224 12 0 chr20 20494815 20494894 -51658988 + Charlie1 DNA MER1_type 56 122 -2639 26 0 0 0 chr20 20494936 20494962 -51658920 + AT_rich Low_complexity Low_complexity 1 26 0 1937 98 25 0 chr20 20494966 20495211 -51658671 - AluSq SINE Alu -62 251 1 551 244 9 0 chr20 20495872 20495987 -51657895 + MER52A LTR ERV1 3 118 -1637 7550 160 31 13 chr20 20496020 20497283 -51656599 + MER52A LTR ERV1 466 1751 -4 344 298 88 22 chr20 20497342 20497523 -51656359 - MIR SINE MIR -12 250 58 266 313 135 0 chr20 20498507 20498603 -51655279 + L2 LINE L2 3162 3270 -2 469 286 199 1 chr20 20498643 20498992 -51654890 + L2 LINE L2 2642 3065 -248 876 152 54 27 chr20 20499082 20499266 -51654616 + MER33 DNA MER1_type 1 189 -135 21 57 0 0 chr20 20499270 20499305 -51654577 + AT_rich Low_complexity Low_complexity 1 35 0 369 302 24 66 chr20 20499325 20499338 -51654544 - MIR SINE MIR -27 235 223 2231 104 3 0 chr20 20499338 20499625 -51654257 - AluSx SINE Alu -24 288 1 369 302 24 66 chr20 20499625 20499823 -51654059 - MIR SINE MIR -39 223 33 478 330 123 20 chr20 20499997 20500346 -51653536 - L2 LINE L2 -5 3308 2924 318 245 119 33 chr20 20500466 20500617 -51653265 + MLT1J2 LTR MaLR 73 236 -214 2026 131 20 3 chr20 20500770 20501067 -51652815 + AluSx SINE Alu 5 306 -6 26 0 0 0 chr20 20501142 20501168 -51652714 + AT_rich Low_complexity Low_complexity 1 26 0 266 105 26 0 chr20 20501210 20501248 -51652634 + Charlie8 DNA MER1_type 1390 1428 -989 185 65 32 0 chr20 20501609 20501640 -51652242 + (CAA)n Simple_repeat Simple_repeat 2 33 0 1594 164 0 48 chr20 20501645 20501937 -51651945 + AluJo SINE Alu 15 292 -20 743 212 45 87 chr20 20501943 20502240 -51651642 + L1MD3 LINE L1 6195 6359 0 1562 145 104 22 chr20 20502678 20502947 -51650935 + AluJb SINE Alu 9 299 -13 278 183 157 70 chr20 20503071 20503153 -51650729 - MER112 DNA MER1_type -4 256 160 2098 116 0 14 chr20 20503153 20503447 -51650435 + AluSx SINE Alu 1 290 -22 278 183 157 70 chr20 20503447 20503479 -51650403 - MER112 DNA MER1_type -100 160 132 2532 174 81 20 chr20 20503755 20504314 -51649568 + L1MD3 LINE L1 7402 7994 -1 320 286 98 8 chr20 20504735 20504868 -51649014 - L2 LINE L2 -8 3305 3161 265 220 85 59 chr20 20504983 20505101 -51648781 + MIR SINE MIR 108 228 -34 1795 38 0 0 chr20 20506341 20506550 -51647332 - L1PA4 LINE L1 -261 5893 5685 2360 18 0 4 chr20 20506550 20506822 -51647060 + L1PA4 LINE L1 5883 6155 0 21 0 0 0 chr20 20507236 20507257 -51646625 + AT_rich Low_complexity Low_complexity 1 21 0 663 209 0 7 chr20 20507296 20507435 -51646447 - Charlie1 DNA MER1_type -1 2760 2623 898 222 26 11 chr20 20507448 20507637 -51646245 - Charlie1 DNA MER1_type -2569 192 1 196 324 37 44 chr20 20507637 20507773 -51646109 - MIR3 SINE MIR -67 141 7 183 213 16 33 chr20 20507977 20508038 -51645844 + L2 LINE L2 2423 2482 -832 433 271 26 19 chr20 20508125 20508280 -51645602 + L1ME4a LINE L1 5962 6117 -4 608 248 64 15 chr20 20508657 20508859 -51645023 - MIR SINE MIR 0 262 51 371 246 98 16 chr20 20508926 20509048 -51644834 + MER3 DNA MER1_type 78 209 0 200 219 68 55 chr20 20509261 20509334 -51644548 + MIR SINE MIR 43 116 -92 2411 55 3 7 chr20 20509819 20510109 -51643773 + AluY SINE Alu 5 293 -18 184 200 0 0 chr20 20510466 20510501 -51643381 + L2 LINE L2 3227 3261 -11 192 260 10 73 chr20 20510562 20510658 -51643224 - MIR SINE MIR 0 262 173 1983 130 0 19 chr20 20510688 20510995 -51642887 + AluJo SINE Alu 12 312 0 347 235 88 47 chr20 20511031 20511054 -51642828 + MIR SINE MIR 86 107 -155 1836 168 45 31 chr20 20511054 20511412 -51642470 + MLT1A1 LTR MaLR 1 363 -2 347 235 88 47 chr20 20511412 20511558 -51642324 + MIR SINE MIR 107 262 0 225 0 0 0 chr20 20512116 20512141 -51641741 + (TG)n Simple_repeat Simple_repeat 2 26 0 227 296 42 21 chr20 20512240 20512382 -51641500 - L1ME LINE L1 -302 5819 5675 2201 92 14 0 chr20 20513777 20514070 -51639812 - AluY SINE Alu -14 297 1 23 0 0 0 chr20 20515345 20515368 -51638514 + GC_rich Low_complexity Low_complexity 1 23 0 189 147 0 0 chr20 20515937 20515971 -51637911 - MIR SINE MIR -119 143 110 2405 67 34 0 chr20 20516228 20516525 -51637357 - AluSx SINE Alu -5 307 1 209 306 194 0 chr20 20517688 20517822 -51636060 - MER5A DNA MER1_type -1 188 29 1824 147 0 33 chr20 20517921 20518227 -51635655 + AluSx SINE Alu 1 296 -16 282 307 29 15 chr20 20518274 20518411 -51635471 - MLT1H LTR MaLR -3 546 408 677 180 68 12 chr20 20518645 20518806 -51635076 + Charlie4 DNA MER1_type 1788 1957 -4 411 73 0 0 chr20 20518859 20518914 -51634968 + (TA)n Simple_repeat Simple_repeat 2 56 0 2588 58 6 6 chr20 20518916 20519229 -51634653 - AluSq SINE Alu 0 313 1 187 200 0 80 chr20 20519509 20519559 -51634323 + MIR SINE MIR 98 143 -119 2247 124 0 0 chr20 20520016 20520323 -51633559 - AluSx SINE Alu -5 307 1 188 370 43 27 chr20 20520773 20520957 -51632925 - L2 LINE L2 -222 3050 2864 1073 270 61 40 chr20 20520985 20521463 -51632419 + MLT1H LTR MaLR 39 526 -23 231 297 16 0 chr20 20523328 20523392 -51630490 - MIR SINE MIR -158 104 40 2625 139 110 0 chr20 20523561 20523999 -51629883 - MER66B LTR ERV1 0 486 1 294 29 0 0 chr20 20524140 20524175 -51629707 + (CA)n Simple_repeat Simple_repeat 1 35 0 * 342 0 0 0 chr20 20524174 20524212 -51629670 + (TC)n Simple_repeat Simple_repeat 2 39 0 492 219 71 17 chr20 20524256 20524403 -51629479 - L1ME3 LINE L1 0 6164 6018 2765 205 88 14 chr20 20524436 20525099 -51628783 - L1ME1 LINE L1 -7 6159 5448 423 0 0 0 chr20 20525555 20525602 -51628280 + (CA)n Simple_repeat Simple_repeat 2 48 0 28 48 0 0 chr20 20526066 20526108 -51627774 + AT_rich Low_complexity Low_complexity 1 42 0 820 277 175 37 chr20 20526498 20526524 -51627358 - MLT1J LTR MaLR -52 459 438 2051 125 33 10 chr20 20526524 20526829 -51627053 + AluSx SINE Alu 1 312 0 820 277 175 37 chr20 20526829 20527203 -51626679 - MLT1J LTR MaLR -73 438 4 2104 114 3 43 chr20 20527280 20527604 -51626278 - AluSx SINE Alu -1 311 1 662 244 60 78 chr20 20527639 20527958 -51625924 - L1ME3 LINE L1 -2177 5631 5319 1816 167 3 0 chr20 20528110 20528423 -51625459 + AluSx SINE Alu 2 315 0 1960 133 65 47 chr20 20529435 20529818 -51624064 + MLT1B LTR MaLR 1 390 0 994 265 105 8 chr20 20529905 20530278 -51623604 - LTR16A LTR ERVL -25 425 17 391 191 24 24 chr20 20530621 20530705 -51623177 - MLT1K LTR MaLR -493 95 12 283 278 150 8 chr20 20530719 20530852 -51623030 + MIR SINE MIR 40 191 -71 345 283 18 0 chr20 20530852 20530965 -51622917 + (TA)n Simple_repeat Simple_repeat 2 116 0 1616 191 17 0 chr20 20531125 20531413 -51622469 + AluJo SINE Alu 1 293 -19 1768 101 97 4 chr20 20531514 20531792 -51622090 - AluSx SINE Alu 0 302 1 32 0 0 0 chr20 20531839 20531871 -51622011 + AT_rich Low_complexity Low_complexity 1 32 0 3347 150 19 78 chr20 20533294 20534014 -51619868 - L1MB3 LINE L1 -16 6167 5490 21 36 0 0 chr20 20534315 20534343 -51619539 + AT_rich Low_complexity Low_complexity 1 28 0 534 282 84 29 chr20 20534363 20534935 -51618947 + L1M4 LINE L1 5219 5817 -361 189 107 0 0 chr20 20535314 20535342 -51618540 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 4936 195 31 61 chr20 20535492 20535840 -51618042 + L1MB7 LINE L1 4029 4386 -1798 1789 173 0 16 chr20 20535840 20536153 -51617729 + AluSx SINE Alu 1 308 -4 4936 195 31 61 chr20 20536153 20537668 -51616214 + L1MB7 LINE L1 4386 5818 -366 964 175 0 29 chr20 20537668 20537839 -51616043 + FRAM SINE Alu 1 166 0 4936 195 31 61 chr20 20537839 20538186 -51615696 + L1MB7 LINE L1 5818 6174 -10 1076 127 0 0 chr20 20538744 20538886 -51614996 + AluSx SINE Alu 1 142 -171 1082 171 0 0 chr20 20539102 20539272 -51614610 + AluSx SINE Alu 127 296 -14 24 0 0 0 chr20 20539628 20539652 -51614230 + AT_rich Low_complexity Low_complexity 1 24 0 242 131 0 2 chr20 20540193 20540323 -51613559 + AluSq SINE Alu 131 291 -10 2371 90 3 3 chr20 20541103 20541403 -51612479 + AluSg SINE Alu 1 300 -10 1559 130 157 0 chr20 20542063 20542324 -51611558 - AluSx SINE Alu 0 302 1 506 248 8 8 chr20 20542382 20542507 -51611375 + L1MD2 LINE L1 6225 6349 -10 24 0 0 0 chr20 20542536 20542560 -51611322 + AT_rich Low_complexity Low_complexity 1 24 0 582 236 8 0 chr20 20542722 20542845 -51611037 - FLAM_A SINE Alu -9 124 1 258 262 0 16 chr20 20542845 20542906 -51610976 - L2 LINE L2 -6 3307 3248 343 247 34 0 chr20 20544293 20544382 -51609500 + MIR SINE MIR 86 177 -85 1605 184 39 0 chr20 20544489 20544604 -51609278 + AluJb SINE Alu 1 110 -202 180 0 0 0 chr20 20544604 20544624 -51609258 + (TAA)n Simple_repeat Simple_repeat 2 21 0 1605 184 39 0 chr20 20544624 20544791 -51609091 + AluJb SINE Alu 110 294 -18 258 301 12 0 chr20 20544909 20544992 -51608890 + (TA)n Simple_repeat Simple_repeat 2 85 0 601 278 62 9 chr20 20545643 20545870 -51608012 - MIR SINE MIR -3 259 21 1171 199 124 4 chr20 20545927 20546193 -51607689 + AluJo SINE Alu 2 299 -3 582 246 67 97 chr20 20546973 20547355 -51606527 - MLT1J LTR MaLR 0 511 220 1738 244 95 18 chr20 20547488 20548036 -51605846 + MLT1G LTR MaLR 1 590 0 577 262 30 10 chr20 20548813 20549140 -51604742 - MLT1I LTR MaLR -2 407 47 186 324 14 14 chr20 20549387 20549461 -51604421 + MIR SINE MIR 55 128 -80 499 250 207 9 chr20 20550719 20550951 -51602931 + L1ME3A LINE L1 5827 6104 -66 254 333 155 32 chr20 20551038 20551257 -51602625 + L2 LINE L2 3021 3266 -6 543 336 151 36 chr20 20551446 20552363 -51601519 + L2 LINE L2 1845 2866 -448 2183 110 3 0 chr20 20552409 20552715 -51601167 + AluSx SINE Alu 2 308 0 296 261 77 23 chr20 20554202 20554332 -51599550 + MLT1K LTR MaLR 341 477 -111 363 284 11 0 chr20 20554619 20554714 -51599168 - MIR SINE MIR -140 122 27 322 206 0 0 chr20 20556043 20556111 -51597771 + MER5A DNA MER1_type 42 109 -80 806 220 17 0 chr20 20556170 20556347 -51597535 - MER5A DNA MER1_type 0 189 10 861 176 111 42 chr20 20556378 20556640 -51597242 - MER5C DNA MER1_type -18 306 27 1401 199 126 65 chr20 20556644 20556891 -51596991 + Charlie1b DNA MER1_type 1 232 -2529 1577 164 49 28 chr20 20556891 20557177 -51596705 + AluJo SINE Alu 1 292 -20 1401 199 126 65 chr20 20557177 20557422 -51596460 + Charlie1b DNA MER1_type 232 523 0 247 303 147 24 chr20 20557649 20557860 -51596022 - MLT1L LTR MaLR 0 615 379 444 214 45 13 chr20 20557943 20558085 -51595797 - MLT1L LTR MaLR -365 146 1 284 250 15 0 chr20 20558092 20558160 -51595722 + L2 LINE L2 3204 3272 0 325 278 135 35 chr20 20558530 20558818 -51595064 - L1ME4a LINE L1 -47 6074 5758 1212 296 75 12 chr20 20558855 20559284 -51594598 - LTR16B LTR ERVL 0 464 9 1161 221 91 27 chr20 20559830 20560160 -51593722 - LTR16A1 LTR ERVL -16 441 91 399 68 0 149 chr20 20560166 20560184 -51593698 - LTR26B LTR ERV1 -339 192 173 2170 136 0 13 chr20 20560184 20560500 -51593382 + AluSx SINE Alu 1 312 0 399 68 0 149 chr20 20560500 20560555 -51593327 - LTR26B LTR ERV1 -358 173 130 2213 108 0 14 chr20 20560555 20560851 -51593031 + AluSx SINE Alu 1 292 -20 3106 143 0 41 chr20 20560891 20561138 -51592744 + LTR26B LTR ERV1 41 258 -273 2534 49 0 7 chr20 20561138 20561444 -51592438 + AluY SINE Alu 1 304 -7 3106 143 0 41 chr20 20561444 20561708 -51592174 + LTR26B LTR ERV1 258 531 0 652 217 32 95 chr20 20561712 20561901 -51591981 - MLT1J LTR MaLR -236 275 99 212 339 68 36 chr20 20562206 20562427 -51591455 - L2 LINE L2 -213 3059 2832 746 260 17 0 chr20 20562521 20562698 -51591184 - AluJo SINE Alu -14 298 119 531 257 30 83 chr20 20562698 20563010 -51590872 + LTR16C LTR ERVL 107 478 -13 184 255 0 0 chr20 20563134 20563181 -51590701 + L2 LINE L2 3267 3313 0 865 183 116 88 chr20 20563628 20563686 -51590196 + LTR8A LTR ERV1 287 342 -385 1442 181 61 20 chr20 20563686 20563979 -51589903 + AluJo SINE Alu 1 305 -7 865 183 116 88 chr20 20563979 20564290 -51589592 + LTR8A LTR ERV1 342 727 0 4202 126 12 66 chr20 20565181 20565575 -51588307 - LTR8 LTR ERV1 0 691 352 2362 44 30 14 chr20 20565575 20565870 -51588012 - AluY SINE Alu -11 300 1 4202 126 12 66 chr20 20565870 20566205 -51587677 - LTR8 LTR ERV1 -339 352 1 338 236 154 0 chr20 20566410 20566520 -51587362 + MIR SINE MIR 13 139 -123 261 0 0 0 chr20 20566761 20566790 -51587092 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 583 154 116 95 chr20 20566964 20567378 -51586504 + LTR29 LTR ERV1 1 563 -59 200 143 24 0 chr20 20567580 20567622 -51586260 + CT-rich Low_complexity Low_complexity 1 43 0 2277 96 20 0 chr20 20567958 20568250 -51585632 + AluSg SINE Alu 13 310 0 4012 179 8 19 chr20 20568418 20568847 -51585035 + MER72 LTR ERV1 9 428 -294 1567 178 74 4 chr20 20568847 20569117 -51584765 - AluJb SINE Alu -23 289 1 4012 179 8 19 chr20 20569117 20569409 -51584473 + MER72 LTR ERV1 428 722 0 2769 120 9 21 chr20 20569791 20570026 -51583856 - MSTA LTR MaLR 0 428 199 2234 112 0 3 chr20 20570026 20570329 -51583553 - AluSg SINE Alu -8 302 1 2769 120 9 21 chr20 20570329 20570525 -51583357 - MSTA LTR MaLR -229 199 2 751 287 163 0 chr20 20571501 20571839 -51582043 - LTR16C LTR ERVL -92 399 7 1084 119 55 82 chr20 20572077 20572296 -51581586 - AluSg/x SINE Alu -16 294 82 304 330 63 6 chr20 20572451 20572608 -51581274 - MIR SINE MIR -54 208 45 1192 265 85 9 chr20 20573041 20573464 -51580418 - LTR16A1 LTR ERVL -2 455 1 2087 113 0 52 chr20 20573532 20573842 -51580040 + AluSg SINE Alu 1 294 -16 556 247 263 28 chr20 20574522 20574971 -51578911 + LTR50 LTR ERVL 25 670 -125 263 296 56 0 chr20 20575053 20575161 -51578721 - MIR SINE MIR -72 190 77 2787 238 59 1 chr20 20575237 20575908 -51577974 - L1MC4 LINE L1 -17 6149 5449 533 180 33 40 chr20 20576045 20576195 -51577687 + MIR SINE MIR 114 262 0 2228 93 34 0 chr20 20576318 20576609 -51577273 - AluSp SINE Alu -12 301 1 1980 171 57 50 chr20 20577365 20577592 -51576290 + MLT1C LTR MaLR 8 232 -235 2107 128 7 0 chr20 20577592 20577890 -51575992 - AluSx SINE Alu -12 300 1 1980 171 57 50 chr20 20577890 20578119 -51575763 + MLT1C LTR MaLR 232 467 0 511 236 16 8 chr20 20578154 20578281 -51575601 - MIR SINE MIR -46 216 89 1337 195 0 0 chr20 20578380 20578601 -51575281 - AluJb SINE Alu -91 221 1 380 230 0 0 chr20 20578681 20578755 -51575127 - L1ME3 LINE L1 -24 6138 6065 2368 75 0 16 chr20 20578838 20579144 -51574738 - AluY SINE Alu -10 301 1 2454 43 0 0 chr20 20579342 20579649 -51574233 - AluY SINE Alu 0 307 1 200 280 0 0 chr20 20579665 20579715 -51574167 + (CA)n Simple_repeat Simple_repeat 1 50 0 5003 139 22 1 chr20 20581275 20582042 -51571840 - LTR39 LTR ERV1 0 783 1 536 302 115 13 chr20 20582076 20582311 -51571571 + LTR16C LTR ERVL 96 354 -137 585 234 31 63 chr20 20582563 20582849 -51571033 - MER34 LTR ERV1 -5 537 261 811 161 0 15 chr20 20582883 20583013 -51570869 - FLAM_C SINE Alu -13 130 3 630 207 88 101 chr20 20583017 20583308 -51570574 - MER34 LTR ERV1 -276 309 1 612 62 0 0 chr20 20583620 20583701 -51570181 + (TAGA)n Simple_repeat Simple_repeat 4 84 0 422 252 102 14 chr20 20583727 20583874 -51570008 - MLT1L LTR MaLR -22 593 434 2150 101 0 7 chr20 20585590 20585877 -51568005 + AluSx SINE Alu 1 285 -27 198 0 0 0 chr20 20585884 20585906 -51567976 + (TAAAA)n Simple_repeat Simple_repeat 2 23 0 1782 168 3 10 chr20 20585915 20586218 -51567664 + AluJb SINE Alu 1 301 -11 725 291 180 43 chr20 20586450 20586917 -51566965 + MLT1K LTR MaLR 18 548 -40 249 308 9 19 chr20 20586938 20587045 -51566837 + L2 LINE L2 2494 2599 -715 23 33 0 0 chr20 20587100 20587130 -51566752 + AT_rich Low_complexity Low_complexity 1 30 0 1830 244 17 15 chr20 20587139 20587614 -51566268 - L1MC4a LINE L1 -11 7797 7322 625 277 64 10 chr20 20587619 20587821 -51566061 - MER58C DNA MER1_type 0 215 3 1756 206 26 70 chr20 20587929 20587972 -51565910 - MLT2D LTR ERVL 0 515 472 243 61 0 0 chr20 20587972 20588005 -51565877 + (TG)n Simple_repeat Simple_repeat 2 34 0 1756 206 26 70 chr20 20588005 20588394 -51565488 - MLT2D LTR ERVL -43 472 3 287 321 19 77 chr20 20588396 20588498 -51565384 + L2 LINE L2 2780 2865 -449 981 203 11 0 chr20 20588498 20588685 -51565197 - MER5A DNA MER1_type 0 189 1 287 321 19 77 chr20 20588685 20588791 -51565091 + L2 LINE L2 2865 2976 -338 592 261 128 6 chr20 20588813 20588841 -51565041 + MER63A DNA MER1_type 9 32 -1656 207 0 0 0 chr20 20588841 20588864 -51565018 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 592 261 128 6 chr20 20588864 20589015 -51564867 + MER63A DNA MER1_type 32 210 0 397 217 237 28 chr20 20589028 20589281 -51564601 + L2 LINE L2 3008 3313 0 218 327 9 65 chr20 20589289 20589396 -51564486 + L2 LINE L2 3122 3222 -50 343 194 0 65 chr20 20589414 20589501 -51564381 - FLAM_A SINE Alu -6 127 65 276 191 48 0 chr20 20589681 20589744 -51564138 + LTR16C LTR ERVL 426 491 0 488 281 105 22 chr20 20590955 20591183 -51562699 + MIR SINE MIR 4 250 -12 938 100 0 29 chr20 20591263 20591403 -51562479 - AluSg/x SINE Alu -3 307 172 464 159 0 0 chr20 20591403 20591472 -51562410 - AluS SINE Alu -242 70 2 2183 141 0 0 chr20 20591880 20592186 -51561696 + AluSx SINE Alu 1 306 -6 1313 154 62 41 chr20 20592345 20592475 -51561407 - MER33 DNA MER1_type -2261 324 198 1813 177 0 7 chr20 20592475 20592785 -51561097 - AluJo SINE Alu -4 308 1 1313 154 62 41 chr20 20592785 20592977 -51560905 - MER33 DNA MER1_type -2387 198 1 831 143 0 0 chr20 20593240 20593359 -51560523 - FLAM_C SINE Alu -20 123 5 28 22 0 22 chr20 20593366 20593394 -51560488 + AT_rich Low_complexity Low_complexity 1 29 -16 2227 107 3 0 chr20 20593394 20593684 -51560198 - AluSx SINE Alu -21 291 1 28 22 0 22 chr20 20593684 20593701 -51560181 + AT_rich Low_complexity Low_complexity 29 45 0 569 304 50 6 chr20 20594530 20594691 -51559191 - MER91A DNA MER1_type -27 169 2 2010 141 7 3 chr20 20594878 20595176 -51558706 - AluSx SINE Alu -13 299 1 802 285 94 40 chr20 20596058 20596336 -51557546 + LTR16C LTR ERVL 1 309 -182 725 188 50 17 chr20 20596336 20596517 -51557365 - MER53 DNA DNA -1 188 2 802 285 94 40 chr20 20596517 20596642 -51557240 + LTR16C LTR ERVL 309 426 -65 903 229 79 55 chr20 20596643 20596935 -51556947 - LTR16A1 LTR ERVL -3 454 156 184 245 0 20 chr20 20597140 20597189 -51556693 + L2 LINE L2 3262 3309 -4 1876 265 43 24 chr20 20598305 20598889 -51554993 + L1ME3A LINE L1 5555 6149 -21 2359 105 0 19 chr20 20598891 20599206 -51554676 - AluSc SINE Alu 0 309 1 2664 92 14 0 chr20 20599211 20599570 -51554312 - L1PA10 LINE L1 -9 6159 5796 11387 127 2 3 chr20 20599570 20601294 -51552588 - L1PA10 LINE L1 -1073 5073 3353 1914 159 0 17 chr20 20601484 20601785 -51552097 - AluJo SINE Alu -16 296 1 806 219 156 92 chr20 20601889 20602339 -51551543 - MER66A LTR ERV1 -10 599 99 618 212 0 0 chr20 20602493 20602606 -51551276 - FLAM_A SINE Alu -17 125 13 2024 141 13 13 chr20 20602635 20602947 -51550935 + AluSx SINE Alu 1 312 0 32 0 0 0 chr20 20603110 20603142 -51550740 + AT_rich Low_complexity Low_complexity 1 32 0 1667 158 4 8 chr20 20603149 20603409 -51550473 - AluSx SINE Alu -36 276 18 1864 206 40 88 chr20 20605095 20605252 -51548630 - MER34 LTR ERV1 0 542 379 410 160 28 57 chr20 20605252 20605358 -51548524 + L1PA12 LINE L1 6066 6168 0 1864 206 40 88 chr20 20605358 20605769 -51548113 - MER34 LTR ERV1 -163 379 1 181 292 21 0 chr20 20605915 20605963 -51547919 - L2 LINE L2 -66 3247 3199 418 58 0 0 chr20 20606013 20606065 -51547817 - Alu SINE Alu -260 53 2 414 234 37 0 chr20 20606065 20606172 -51547710 - L1MC4 LINE L1 -149 7893 7783 228 315 70 37 chr20 20606172 20606413 -51547469 - L2 LINE L2 -171 3101 2853 181 349 70 0 chr20 20606467 20606596 -51547286 - L2 LINE L2 -2198 1116 979 919 255 109 39 chr20 20607014 20607134 -51546748 - L1MC4 LINE L1 -5 8037 7927 1735 139 94 0 chr20 20607134 20607401 -51546481 - AluSx SINE Alu -20 292 1 919 255 109 39 chr20 20607401 20607692 -51546190 - L1MC4 LINE L1 -115 7927 7597 2360 96 0 3 chr20 20607893 20608196 -51545686 - AluSq SINE Alu -11 302 1 27 29 0 0 chr20 20608476 20608510 -51545372 + AT_rich Low_complexity Low_complexity 1 34 0 189 0 0 0 chr20 20608551 20608572 -51545310 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 21 57 0 0 chr20 20608925 20608960 -51544922 + AT_rich Low_complexity Low_complexity 1 35 0 2231 30 0 19 chr20 20609147 20609412 -51544470 - AluY SINE Alu -51 260 1 1850 133 47 4 chr20 20609548 20609827 -51544055 + AluSx SINE Alu 6 296 -16 2392 87 6 0 chr20 20612461 20612772 -51541110 - AluSp SINE Alu 0 313 1 865 40 0 0 chr20 20612787 20612888 -51540994 - HY3 scRNA scRNA 0 101 1 2198 141 0 0 chr20 20613100 20613406 -51540476 + AluSx SINE Alu 1 306 -6 21 0 0 0 chr20 20613482 20613503 -51540379 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr20 20613578 20613599 -51540283 + AT_rich Low_complexity Low_complexity 1 21 0 402 57 0 0 chr20 20613769 20613822 -51540060 + (CA)n Simple_repeat Simple_repeat 1 53 0 282 276 89 48 chr20 20613947 20614262 -51539620 + HAL1 LINE L1 1110 1437 -1070 738 267 53 9 chr20 20614413 20614701 -51539181 + MLT1H1 LTR MaLR 1 312 -278 2526 83 0 10 chr20 20614871 20615183 -51538699 - AluSq SINE Alu -4 309 1 405 58 0 0 chr20 20615209 20615261 -51538621 + (TA)n Simple_repeat Simple_repeat 2 53 0 1955 239 107 2 chr20 20615534 20616012 -51537870 + MER74A LTR ERVL 1 528 -30 1995 211 147 30 chr20 20616176 20616707 -51537175 + MLT1G1 LTR MaLR 1 593 -2 288 184 69 58 chr20 20616823 20616910 -51536972 - MER5B DNA MER1_type -69 109 22 292 214 22 45 chr20 20616932 20617021 -51536861 + MER5B DNA MER1_type 92 178 0 460 188 21 0 chr20 20617113 20617209 -51536673 - MER5A DNA MER1_type -83 106 9 334 213 107 13 chr20 20617833 20617908 -51535974 + MER58C DNA MER1_type 7 88 -127 369 271 39 23 chr20 20617967 20618096 -51535786 + MER58C DNA MER1_type 85 215 0 1831 144 17 114 chr20 20618237 20618641 -51535241 + MLT1A1 LTR MaLR 1 365 0 787 268 116 33 chr20 20618942 20619304 -51534578 - MLT1J2 LTR MaLR 0 450 59 1031 246 43 7 chr20 20619304 20619609 -51534273 + L1ME3A LINE L1 5850 6165 -5 2127 204 53 92 chr20 20620385 20621258 -51532624 + L1MC5 LINE L1 7091 7929 -32 665 248 75 91 chr20 20621266 20621705 -51532177 + HsTC2 DNA Tc2 1291 1898 0 280 309 198 0 chr20 20622138 20622264 -51531618 - MIR3 SINE MIR -24 184 34 663 200 44 19 chr20 20622299 20622459 -51531423 - LTR16A1 LTR ERVL -12 445 282 625 167 19 9 chr20 20622508 20622616 -51531266 + MLT1B LTR MaLR 1 109 -281 1759 166 16 95 chr20 20622886 20623108 -51530774 + MLT1B LTR MaLR 1 176 -214 1943 153 3 7 chr20 20623108 20623428 -51530454 + AluSx SINE Alu 1 312 0 1759 166 16 95 chr20 20623428 20623628 -51530254 + MLT1B LTR MaLR 176 390 0 243 250 12 38 chr20 20623637 20623717 -51530165 - LTR16A1 LTR ERVL -332 125 48 1591 170 83 7 chr20 20624168 20624457 -51529425 - AluJo SINE Alu -1 311 1 489 263 13 19 chr20 20624972 20625128 -51528754 + MER69A DNA AcHobo 21 175 -2 1031 169 29 124 chr20 20625405 20625487 -51528395 + MER20 DNA MER1_type 1 89 -130 1515 191 21 17 chr20 20625487 20625775 -51528107 - AluJo SINE Alu -23 289 1 1031 169 29 124 chr20 20625775 20625934 -51527948 + MER20 DNA MER1_type 89 219 0 473 289 7 40 chr20 20626015 20626164 -51527718 + MIR SINE MIR 119 262 0 194 279 15 44 chr20 20626598 20626666 -51527216 + MIR3 SINE MIR 105 170 -38 251 200 20 0 chr20 20627695 20627745 -51526137 - MER115 DNA AcHobo -2 691 641 1199 322 60 6 chr20 20627796 20628162 -51525720 - MER115 DNA AcHobo -307 386 1 356 303 130 23 chr20 20628211 20628278 -51525604 - L1MC4a LINE L1 -329 5792 5734 2730 184 7 41 chr20 20628278 20628816 -51525066 + MLT2B1 LTR ERVL 1 520 0 356 303 130 23 chr20 20628816 20629014 -51524868 - L1MC4a LINE L1 -387 5734 5571 * 413 262 104 43 chr20 20629005 20629245 -51524637 + L1MC/D LINE L1 5365 5610 -556 375 188 141 8 chr20 20630924 20631052 -51522830 - L1MC5 LINE L1 -916 7045 6901 2166 128 0 0 chr20 20631076 20631374 -51522508 - AluSx SINE Alu -14 298 1 939 165 51 0 chr20 20631408 20631566 -51522316 - AluJb SINE Alu -15 297 132 211 178 44 22 chr20 20631860 20631905 -51521977 - L2 LINE L2 -18 3295 3250 215 322 85 0 chr20 20632649 20632708 -51521174 + MIR SINE MIR 34 97 -165 1297 267 48 36 chr20 20632709 20632801 -51521081 - LTR16C LTR ERVL 0 491 402 2408 93 3 0 chr20 20632801 20633103 -51520779 + AluSg SINE Alu 1 303 -7 1297 267 48 36 chr20 20633103 20633426 -51520456 - LTR16C LTR ERVL -89 402 71 291 306 41 0 chr20 20633475 20633573 -51520309 + MIR SINE MIR 96 197 -65 1051 287 32 36 chr20 20634539 20634950 -51518932 - MLT1I LTR MaLR 0 409 1 751 217 22 56 chr20 20635077 20635257 -51518625 + MER3 DNA MER1_type 1 127 -82 321 303 8 82 chr20 20635372 20635605 -51518277 - MIR SINE MIR -46 216 4 540 254 18 0 chr20 20635898 20636008 -51517874 + MER81 DNA DNA 1 112 -2 510 211 92 0 chr20 20637545 20637654 -51516228 + MER5B DNA MER1_type 59 177 -1 598 252 129 0 chr20 20638346 20638501 -51515381 + MIR3 SINE MIR 33 207 -1 534 216 76 87 chr20 20638501 20638765 -51515117 - Charlie4a DNA MER1_type -24 484 224 734 253 185 43 chr20 20638790 20639233 -51514649 + MER90 LTR ERV1 52 557 -18 297 186 0 34 chr20 20639234 20639293 -51514589 - Charlie4a DNA MER1_type -283 225 169 228 338 0 15 chr20 20639296 20639364 -51514518 - MIR SINE MIR -188 74 8 295 125 175 125 chr20 20639791 20639871 -51514011 + MLT1B LTR MaLR 1 84 -306 1001 156 39 49 chr20 20639889 20640094 -51513788 + MLT1B LTR MaLR 188 390 0 219 88 0 0 chr20 20640172 20640206 -51513676 + (TTG)n Simple_repeat Simple_repeat 1 34 0 719 122 24 32 chr20 20640207 20640330 -51513552 + LOR1a LTR ERV1 50 171 -326 1365 147 5 13 chr20 20640335 20640559 -51513323 + LOR1a LTR ERV1 276 497 0 1687 121 31 170 chr20 20640630 20640641 -51513241 - MER63B DNA MER1_type -669 393 382 803 195 0 0 chr20 20640641 20640759 -51513123 - FLAM_C SINE Alu -15 118 1 1687 121 31 170 chr20 20640759 20640860 -51513022 - MER63B DNA MER1_type -680 382 269 2245 117 0 0 chr20 20640860 20641151 -51512731 + AluSg SINE Alu 6 296 -14 1687 121 31 170 chr20 20641151 20641484 -51512398 - MER63B DNA MER1_type -793 269 9 629 216 65 13 chr20 20642429 20642582 -51511300 - MER5B DNA MER1_type -11 167 7 588 150 235 39 chr20 20642593 20642746 -51511136 + MER5A DNA MER1_type 4 186 -3 202 267 47 58 chr20 20643690 20643776 -51510106 - MIR SINE MIR 0 262 178 2121 104 21 7 chr20 20643790 20644079 -51509803 - AluSx SINE Alu -19 293 1 230 323 61 10 chr20 20644139 20644238 -51509644 - L1ME3A LINE L1 -67 6103 6000 2838 167 16 14 chr20 20644284 20644787 -51509095 - L1MB3 LINE L1 -1 6182 5679 2289 113 0 0 chr20 20644905 20645205 -51508677 - AluSg SINE Alu -10 300 1 232 274 83 0 chr20 20645214 20645298 -51508584 - MIR SINE MIR -54 208 118 699 319 74 53 chr20 20645849 20646284 -51507598 - L2 LINE L2 -1 3312 2869 1831 124 54 7 chr20 20646427 20646725 -51507157 + AluSx SINE Alu 1 312 0 2374 111 47 39 chr20 20647056 20647417 -51506465 + THE1B LTR MaLR 1 364 0 12140 82 8 2 chr20 20647417 20648977 -51504905 + THE1B-int LTR MaLR 1 1569 -11 2164 124 48 37 chr20 20648986 20649341 -51504541 + THE1B LTR MaLR 1 359 -5 2255 73 43 7 chr20 20649343 20649643 -51504239 + AluY SINE Alu 1 311 0 228 258 30 0 chr20 20649718 20649784 -51504098 + L1MC4a LINE L1 7358 7425 -383 520 220 9 0 chr20 20649802 20649911 -51503971 + L1MC4 LINE L1 7547 7656 -386 1995 133 174 16 chr20 20650292 20650660 -51503222 + MSTB1 LTR MaLR 3 428 -4 426 241 108 54 chr20 20651423 20651589 -51502293 - MLT1H LTR MaLR 0 549 375 1967 156 3 0 chr20 20651855 20652144 -51501738 - AluSx SINE Alu -18 294 5 256 318 111 8 chr20 20652285 20652411 -51501471 + MIR3 SINE MIR 38 176 -32 2052 171 18 38 chr20 20655185 20655578 -51498304 + MLT1B LTR MaLR 1 385 -5 200 320 117 10 chr20 20655705 20655808 -51498074 + MIR SINE MIR 121 234 -28 2223 206 44 59 chr20 20657613 20658179 -51495703 - L1ME3A LINE L1 -5 6165 5609 2195 126 7 0 chr20 20658179 20658481 -51495401 - AluSq SINE Alu -9 304 1 2223 206 44 59 chr20 20658481 20658556 -51495326 - L1ME3A LINE L1 -561 5609 5534 494 262 174 88 chr20 20659503 20659703 -51494179 + MLT1J LTR MaLR 3 184 -327 1822 131 57 34 chr20 20659703 20660000 -51493882 + AluJo SINE Alu 1 304 -8 494 262 174 88 chr20 20660000 20660265 -51493617 + MLT1J LTR MaLR 184 508 -3 802 306 84 51 chr20 20660655 20661123 -51492759 + MLT1G1 LTR MaLR 6 498 -97 1904 164 6 3 chr20 20661123 20661434 -51492448 + AluJb SINE Alu 1 312 0 802 306 84 51 chr20 20661434 20661536 -51492346 + MLT1G1 LTR MaLR 498 595 0 571 331 102 16 chr20 20661561 20661875 -51492007 - L3 LINE CR1 -34 1543 1203 21 0 0 0 chr20 20662556 20662577 -51491305 + AT_rich Low_complexity Low_complexity 1 21 0 2978 70 0 3 chr20 20662617 20662974 -51490908 - L1PA8 LINE L1 -11 6161 5806 391 261 50 36 chr20 20663344 20663495 -51490387 - MIR3 SINE MIR -18 190 39 473 186 35 62 chr20 20663545 20663658 -51490224 - MER63 DNA MER1_type -100 736 1 760 294 128 69 chr20 20663775 20663994 -51489888 + L2 LINE L2 2262 2466 -848 1925 216 73 9 chr20 20663994 20664433 -51489449 + MLT1C LTR MaLR 1 467 0 760 294 128 69 chr20 20664433 20664883 -51488999 + L2 LINE L2 2466 2971 -343 1133 276 33 31 chr20 20664960 20665470 -51488412 + MLT1H1 LTR MaLR 22 590 0 410 333 0 0 chr20 20665534 20665630 -51488252 + L2 LINE L2 3160 3255 -17 2162 113 13 16 chr20 20666781 20667091 -51486791 - AluSx SINE Alu -3 309 1 873 249 97 56 chr20 20667123 20667222 -51486660 - MLT1I LTR MaLR 0 409 315 441 0 0 0 chr20 20667222 20667271 -51486611 + (TG)n Simple_repeat Simple_repeat 2 50 0 873 249 97 56 chr20 20667271 20667564 -51486318 - MLT1I LTR MaLR -94 315 1 1520 173 0 116 chr20 20667830 20668183 -51485699 - AluJo SINE Alu 0 312 1 2314 107 7 0 chr20 20668192 20668500 -51485382 - AluSg SINE Alu 0 310 1 360 203 14 0 chr20 20668539 20668608 -51485274 + MER5A DNA MER1_type 9 78 -111 817 209 0 0 chr20 20670696 20670825 -51483057 - FLAM_C SINE Alu -4 129 1 296 336 64 0 chr20 20670944 20671054 -51482828 - L2 LINE L2 -2 3311 3195 623 203 39 13 chr20 20671173 20671326 -51482556 - MIR SINE MIR -6 256 100 274 233 17 0 chr20 20672988 20673048 -51480834 + MIR SINE MIR 50 110 -152 543 257 101 22 chr20 20673109 20673288 -51480594 - MIR SINE MIR -68 194 2 543 289 80 8 chr20 20673517 20673756 -51480126 + MER113 DNA MER1_type? 164 419 -102 25 0 0 0 chr20 20674174 20674199 -51479683 + AT_rich Low_complexity Low_complexity 1 25 0 320 323 139 13 chr20 20674979 20675137 -51478745 - L2 LINE L2 -568 2746 2569 222 345 23 0 chr20 20675235 20675322 -51478560 + MIR3 SINE MIR 7 95 -113 522 270 122 25 chr20 20675371 20675567 -51478315 - MER58C DNA MER1_type 0 215 1 250 271 95 47 chr20 20675568 20675679 -51478203 - MIR SINE MIR -54 154 38 587 186 17 34 chr20 20675711 20675829 -51478053 - MER58B DNA MER1_type -4 337 222 952 229 85 0 chr20 20676733 20676934 -51476948 - MER20 DNA MER1_type -1 218 1 395 282 19 0 chr20 20677660 20677763 -51476119 + MER5A DNA MER1_type 1 105 -84 1392 210 138 13 chr20 20678192 20678577 -51475305 + L1ME1 LINE L1 5693 6125 -41 2449 81 0 10 chr20 20679900 20680209 -51473673 + AluY SINE Alu 1 306 -5 2210 102 0 16 chr20 20680306 20680609 -51473273 + AluSq SINE Alu 6 303 -10 596 171 193 11 chr20 20684164 20684345 -51469537 - HsTC2 DNA Tc2 -110 1788 1575 317 217 96 52 chr20 20684405 20684520 -51469362 - MER5C DNA MER1_type -200 124 5 924 228 58 17 chr20 20684652 20684893 -51468989 - L1ME1 LINE L1 -1 6165 5915 344 231 121 0 chr20 20684919 20685010 -51468872 - L1ME1 LINE L1 -406 5760 5659 816 227 273 27 chr20 20685034 20685259 -51468623 - L1MC4 LINE L1 -4 8038 7870 1413 201 58 0 chr20 20685259 20685533 -51468349 + AluJb SINE Alu 1 290 -22 816 227 273 27 chr20 20685533 20685681 -51468201 - L1MC4 LINE L1 -172 7870 7573 331 242 121 55 chr20 20685703 20685868 -51468014 - L1MC4 LINE L1 -1402 6640 6465 714 204 45 57 chr20 20686062 20686238 -51467644 + MER5B DNA MER1_type 2 175 -3 1457 161 74 97 chr20 20686354 20686745 -51467137 - MER66A LTR ERV1 0 478 97 363 274 233 7 chr20 20687048 20687194 -51466688 - MER5A DNA MER1_type 0 189 11 312 27 0 0 chr20 20687308 20687345 -51466537 + (CA)n Simple_repeat Simple_repeat 1 37 0 560 323 162 28 chr20 20687375 20687844 -51466038 - L2 LINE L2 -3 3310 2782 2214 121 0 0 chr20 20688748 20689053 -51464829 + AluSx SINE Alu 1 305 -7 199 227 45 0 chr20 20689087 20689131 -51464751 + MIR SINE MIR 113 158 -104 330 151 0 0 chr20 20689179 20689252 -51464630 + (CA)n Simple_repeat Simple_repeat 1 73 0 453 268 71 24 chr20 20689610 20689737 -51464145 + L2 LINE L2 3180 3312 -1 1079 111 132 0 chr20 20692410 20692549 -51461333 - L1MA9 LINE L1 0 6312 6140 234 0 0 0 chr20 20692549 20692575 -51461307 + (TG)n Simple_repeat Simple_repeat 1 26 0 1079 111 132 0 chr20 20692575 20692625 -51461257 - L1MA9 LINE L1 -172 6140 6098 339 227 173 53 chr20 20694992 20695142 -51458740 + MER5A DNA MER1_type 22 189 0 2339 151 3 0 chr20 20696225 20696580 -51457302 + LTR45 LTR ERV1 1 356 -169 2166 166 36 34 chr20 20696580 20697129 -51456753 + MLT2A2 LTR ERVL 1 554 0 9360 186 6 11 chr20 20697130 20698785 -51455097 - MSTB-int LTR MaLR -5 1646 1 2819 150 7 9 chr20 20698785 20699212 -51454670 - MSTB LTR MaLR 0 426 1 295 77 0 0 chr20 20699248 20699287 -51454595 + MSTB LTR MaLR 1 39 -387 2476 118 18 54 chr20 20699566 20699955 -51453927 - THE1C LTR MaLR 0 375 1 273 313 66 56 chr20 20700197 20700395 -51453487 + MIR SINE MIR 56 255 -7 541 290 29 58 chr20 20702937 20703213 -51450669 - LTR16A1 LTR ERVL 0 457 190 932 171 55 6 chr20 20704238 20704419 -51449463 + MER20 DNA MER1_type 29 218 -1 1366 266 22 25 chr20 20706034 20706437 -51447445 + LTR16C LTR ERVL 89 490 -1 2415 183 21 7 chr20 20706603 20707029 -51446853 + MSTB1 LTR MaLR 1 432 0 634 234 226 69 chr20 20709575 20710036 -51443846 + MLT1G1 LTR MaLR 1 589 -6 379 228 18 44 chr20 20710337 20710451 -51443431 + MLT1J LTR MaLR 3 113 -398 994 322 10 3 chr20 20710616 20710914 -51442968 + LTR16C LTR ERVL 192 491 0 727 253 46 76 chr20 20711059 20711296 -51442586 + MIR SINE MIR 7 236 -26 1869 151 78 71 chr20 20711296 20711720 -51442162 - MSTB1 LTR MaLR -5 427 1 420 312 111 5 chr20 20712645 20712834 -51441048 - MIR SINE MIR -48 214 6 4256 192 54 18 chr20 20713007 20714412 -51439470 - L1MB7 LINE L1 -22 6162 4682 2136 135 0 0 chr20 20714412 20714716 -51439166 - AluY SINE Alu -7 304 1 4256 192 54 18 chr20 20714716 20715138 -51438744 - L1MB7 LINE L1 -1502 4682 4276 2470 191 17 7 chr20 20715139 20715557 -51438325 + MSTB LTR MaLR 5 426 0 5554 201 10 66 chr20 20715557 20716543 -51437339 + MSTB-int LTR MaLR 1 1040 -540 1819 170 6 26 chr20 20716543 20716854 -51437028 + AluSx SINE Alu 1 305 -7 5554 201 10 66 chr20 20716854 20716931 -51436951 + MSTB-int LTR MaLR 1040 1120 -460 1023 82 11 28 chr20 20716931 20717113 -51436769 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 5554 201 10 66 chr20 20717113 20717815 -51436067 + MSTB-int LTR MaLR 1120 1580 0 2610 166 39 5 chr20 20717816 20718227 -51435655 + MSTB LTR MaLR 2 426 0 1511 190 12 39 chr20 20718228 20718560 -51435322 - L1MB7 LINE L1 -1866 4280 3958 1098 303 74 31 chr20 20718627 20719239 -51434643 + L2 LINE L2 2671 3310 -3 988 208 6 0 chr20 20719246 20719419 -51434463 + MER63A DNA MER1_type 1 174 -36 401 329 26 0 chr20 20719443 20719598 -51434284 + MER117 DNA MER1_type 1 159 -38 248 269 77 26 chr20 20720504 20720582 -51433300 - L2 LINE L2 -6 3266 3185 1253 237 32 0 chr20 20720589 20720927 -51432955 - LTR37A LTR ERV1 0 426 78 963 259 100 75 chr20 20721044 20721370 -51432512 - L2 LINE L2 -1283 2031 1686 7680 26 0 2 chr20 20721370 20722601 -51431281 - L1PA5 LINE L1 -5 6149 4921 963 259 100 75 chr20 20722601 20722784 -51431098 - L2 LINE L2 -1628 1686 1509 871 224 5 10 chr20 20722949 20723154 -51430728 - MER3 DNA MER1_type 0 209 6 22 0 0 0 chr20 20723724 20723746 -51430136 + AT_rich Low_complexity Low_complexity 1 22 0 2160 159 3 3 chr20 20723812 20724184 -51429698 - L1PA15 LINE L1 -333 6548 6177 1946 138 0 0 chr20 20724184 20724459 -51429423 + AluSx SINE Alu 1 275 -37 8399 223 22 54 chr20 20724459 20728033 -51425849 - L1PA15 LINE L1 -1984 4878 1418 370 311 31 12 chr20 20728560 20728721 -51425161 + HAL1b LINE L1 746 909 -439 21 71 0 0 chr20 20728806 20728848 -51425034 + AT_rich Low_complexity Low_complexity 1 42 0 33 35 0 17 chr20 20728939 20728964 -51424918 + AT_rich Low_complexity Low_complexity 1 25 -32 1932 155 3 0 chr20 20728964 20729248 -51424634 - AluSx SINE Alu -27 285 1 33 35 0 17 chr20 20729248 20729280 -51424602 + AT_rich Low_complexity Low_complexity 25 57 0 523 29 0 0 chr20 20729280 20729349 -51424533 - L1MA1 LINE L1 0 6302 6234 21 36 0 0 chr20 20729362 20729390 -51424492 + AT_rich Low_complexity Low_complexity 1 28 0 4108 92 3 2 chr20 20729390 20729968 -51423914 - L1PB1 LINE L1 -1 6150 5572 37975 79 4 3 chr20 20729985 20736131 -51417751 - L1PA6 LINE L1 0 6154 1 3542 220 68 3 chr20 20736135 20737075 -51416807 - L1PA15 LINE L1 -5857 1006 6 500 128 0 0 chr20 20737090 20737168 -51416714 - AluS SINE Alu -13 297 220 293 298 121 44 chr20 20737171 20737419 -51416463 + L1MEd LINE L1 94 360 -5759 321 319 17 35 chr20 20737460 20737576 -51416306 + L1MEd LINE L1 934 1047 -5072 878 186 0 53 chr20 20737826 20738014 -51415868 - Tigger2a DNA MER2_type -256 178 1 522 239 35 0 chr20 20738854 20738996 -51414886 - L1MA10 LINE L1 -4 6330 6184 30 0 0 0 chr20 20739042 20739072 -51414810 + AT_rich Low_complexity Low_complexity 1 30 0 5975 103 44 0 chr20 20739172 20740247 -51413635 - L1PA12 LINE L1 -13 6155 5050 3155 153 6 30 chr20 20740247 20740881 -51413001 + L1P LINE L1 4238 4856 -1290 3626 224 78 16 chr20 20742764 20743218 -51410664 + Charlie1 DNA MER1_type 1580 2004 -757 2363 45 24 0 chr20 20743218 20743382 -51410500 - AluY SINE Alu -16 295 120 459 0 0 0 chr20 20743382 20743433 -51410449 + (TG)n Simple_repeat Simple_repeat 2 52 0 2363 45 24 0 chr20 20743433 20743556 -51410326 - AluY SINE Alu -191 120 1 3626 224 78 16 chr20 20743556 20744214 -51409668 + Charlie1 DNA MER1_type 2004 2761 0 23 0 0 0 chr20 20744834 20744857 -51409025 + AT_rich Low_complexity Low_complexity 1 23 0 569 262 20 7 chr20 20746102 20746251 -51407631 + MER5B DNA MER1_type 26 176 -2 1819 162 7 0 chr20 20746415 20746699 -51407183 + AluJo SINE Alu 1 286 -26 211 165 72 10 chr20 20746699 20746796 -51407086 + (TA)n Simple_repeat Simple_repeat 2 104 0 240 324 0 0 chr20 20747405 20747479 -51406403 + L2 LINE L2 3193 3266 -6 826 204 80 4 chr20 20747771 20747996 -51405886 - Charlie4 DNA MER1_type -1702 259 18 333 140 0 0 chr20 20748097 20748154 -51405728 + (TTCC)n Simple_repeat Simple_repeat 4 60 0 784 195 81 0 chr20 20748245 20748419 -51405463 - MER5A DNA MER1_type 0 189 2 2728 164 68 51 chr20 20748665 20748847 -51405035 + LTR26 LTR ERV1 1 178 -425 1965 75 12 0 chr20 20748847 20749102 -51404780 + AluY SINE Alu 2 259 -52 2728 164 68 51 chr20 20749102 20749512 -51404370 + LTR26 LTR ERV1 178 603 0 373 281 16 36 chr20 20749702 20749894 -51403988 + LTR16C LTR ERVL 302 489 -2 357 315 59 35 chr20 20749896 20750099 -51403783 + MIR SINE MIR 49 256 -6 390 21 0 0 chr20 20753849 20753896 -51399986 + (TG)n Simple_repeat Simple_repeat 2 48 0 1915 136 50 39 chr20 20753907 20754267 -51399615 + THE1B LTR MaLR 1 364 0 238 336 25 33 chr20 20754416 20754538 -51399344 + L3 LINE CR1 1269 1389 -188 290 394 46 17 chr20 20754788 20754963 -51398919 + L3 LINE CR1 1393 1572 -5 369 288 88 40 chr20 20756460 20756710 -51397172 - L1ME4a LINE L1 -175 5946 5685 184 323 43 65 chr20 20757833 20757926 -51395956 - L2 LINE L2 -1 3312 3222 331 260 40 14 chr20 20757930 20758023 -51395859 + MIR SINE MIR 20 115 -93 4058 120 35 60 chr20 20758458 20759252 -51394630 - LTR1 LTR ERV1 0 785 12 463 313 27 0 chr20 20760586 20760733 -51393149 - L2 LINE L2 -1022 2292 2142 287 299 131 7 chr20 20761337 20761474 -51392408 + MIR SINE MIR 1 154 -108 1623 239 44 89 chr20 20762218 20762791 -51391091 - MLT1H1 LTR MaLR -2 553 7 294 232 0 91 chr20 20763233 20763332 -51390550 - MIR SINE MIR -102 106 17 12530 204 40 14 chr20 20763593 20768277 -51385605 + L1PA15-16 LINE L1 1222 6042 -807 279 130 136 0 chr20 20768286 20768352 -51385530 + L1PA16 LINE L1 5293 5367 -788 * 3820 100 0 7 chr20 20768345 20768923 -51384959 - L1P LINE L1 -1233 4913 4340 1480 98 4 27 chr20 20768923 20769145 -51384737 + L1PA8 LINE L1 5952 6171 -1 4487 119 59 7 chr20 20769166 20769933 -51383949 + L1PA16 LINE L1 5360 6166 0 2807 208 21 82 chr20 20769998 20770932 -51382950 - MER97a DNA MER1_type? 0 894 18 463 271 117 76 chr20 20771558 20771874 -51382008 + L2 LINE L2 2352 2700 -614 1487 203 0 32 chr20 20771874 20772185 -51381697 + AluJo SINE Alu 1 301 -11 463 271 117 76 chr20 20772185 20772396 -51381486 + L2 LINE L2 2700 2901 -413 583 206 64 7 chr20 20772424 20772565 -51381317 + L2 LINE L2 3165 3313 0 23 0 0 0 chr20 20773140 20773163 -51380719 + AT_rich Low_complexity Low_complexity 1 23 0 269 346 20 40 chr20 20774326 20774427 -51379455 + MIR SINE MIR 12 110 -152 229 253 0 40 chr20 20774646 20774721 -51379161 + L3 LINE CR1 577 648 -929 * 1643 253 90 30 chr20 20774662 20775227 -51378655 + L2 LINE L2 2107 2705 -609 1758 197 39 20 chr20 20775234 20775929 -51377953 - L1MC/D LINE L1 -743 5403 4977 * 1892 228 57 4 chr20 20775913 20776369 -51377513 + L1ME1 LINE L1 5685 6164 -2 597 157 0 100 chr20 20776374 20776514 -51377368 - L1MC1 LINE L1 -132 6201 6076 731 181 65 0 chr20 20776516 20776671 -51377211 + L1MC1 LINE L1 6169 6333 0 831 268 59 16 chr20 20776756 20777010 -51376872 + MER119 DNA MER1_type 68 332 -251 2788 143 17 38 chr20 20777015 20777206 -51376676 - LTR24 LTR ERV1 0 467 274 2269 122 0 0 chr20 20777206 20777517 -51376365 - AluSx SINE Alu -1 311 1 2788 143 17 38 chr20 20777517 20777802 -51376080 - LTR24 LTR ERV1 -193 274 1 2194 112 0 3 chr20 20777819 20778132 -51375750 - L1PB1 LINE L1 -3 6148 5837 2298 210 0 0 chr20 20778134 20778629 -51375253 + L1 LINE L1 4143 4637 -1509 463 235 9 0 chr20 20778630 20778745 -51375137 - LTR24-int LTR ERV1 0 5123 5008 419 328 91 38 chr20 20779126 20779391 -51374491 - LTR24-int LTR ERV1 -437 6685 6407 23 33 0 0 chr20 20780100 20780130 -51373752 + AT_rich Low_complexity Low_complexity 1 30 0 1860 160 0 14 chr20 20780130 20780423 -51373459 - AluJb SINE Alu -23 289 1 855 128 0 0 chr20 20780748 20780873 -51373009 - L1PB1 LINE L1 -190 5961 5837 714 187 0 0 chr20 20780870 20781004 -51372878 + L1 LINE L1 4138 4271 -1875 * 305 292 91 71 chr20 20782908 20783261 -51370621 - LTR24-int LTR ERV1 -4381 4045 3686 305 317 80 46 chr20 20783460 20783943 -51369939 - LTR24-int LTR ERV1 -4093 3897 2538 710 186 40 0 chr20 20783979 20784103 -51369779 - FLAM_C SINE Alu -12 131 3 950 97 8 0 chr20 20785121 20785255 -51368627 + MER85 DNA T2_type 1 135 -4 207 0 0 0 chr20 20785525 20785548 -51368334 + (CAA)n Simple_repeat Simple_repeat 2 24 0 5278 128 21 2 chr20 20785549 20786371 -51367511 + L1PA16 LINE L1 5312 6148 -18 1821 183 6 3 chr20 20786647 20786958 -51366924 - AluJb SINE Alu 0 312 1 24 0 0 0 chr20 20787050 20787074 -51366808 + AT_rich Low_complexity Low_complexity 1 24 0 301 241 0 35 chr20 20787257 20787344 -51366538 - LTR24-int LTR ERV1 -4378 745 662 1465 207 47 41 chr20 20787660 20788156 -51365726 - LTR24-int LTR ERV1 -4472 651 17 2792 141 31 2 chr20 20788172 20788626 -51365256 - LTR24 LTR ERV1 0 467 1 273 284 0 12 chr20 20788735 20788816 -51365066 - LTR67 LTR ERVL -477 80 1 324 246 82 37 chr20 20788832 20788966 -51364916 + MIR SINE MIR 105 244 -18 2317 114 3 0 chr20 20789567 20789873 -51364009 - AluSq SINE Alu -6 307 1 734 310 112 17 chr20 20790876 20791414 -51362468 - L1MC4a LINE L1 -1907 5901 5313 1704 170 7 29 chr20 20791517 20791823 -51362059 - AluJo SINE Alu -13 299 1 28 111 0 0 chr20 20792356 20792482 -51361400 + AT_rich Low_complexity Low_complexity 1 126 0 801 301 89 31 chr20 20792740 20793321 -51360561 - L1MC4a LINE L1 -1807 4339 3725 463 298 94 57 chr20 20793338 20793878 -51360004 - L1MC4a LINE L1 -2503 3643 3084 279 0 0 0 chr20 20793892 20793923 -51359959 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 13797 200 24 7 chr20 20793923 20794292 -51359590 - L1PB1 LINE L1 -11 6856 6495 294 95 0 0 chr20 20794292 20794334 -51359548 + (CA)n Simple_repeat Simple_repeat 2 43 0 13797 200 24 7 chr20 20794334 20797954 -51355928 - L1PB1 LINE L1 -372 6495 2692 288 0 0 0 chr20 20797954 20797986 -51355896 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 13797 200 24 7 chr20 20797986 20798821 -51355061 - L1PB1 LINE L1 -4175 2692 1872 367 248 8 16 chr20 20798810 20798931 -51354951 - L1ME LINE L1 -297 5824 5705 * 2742 10 0 0 chr20 20798965 20799263 -51354619 - AluYa5 SINE Alu -13 298 1 391 294 25 109 chr20 20800069 20800270 -51353612 - MLT1K LTR MaLR -317 271 88 422 313 37 33 chr20 20800741 20800955 -51352927 + LTR16C LTR ERVL 275 489 -2 295 350 43 0 chr20 20801256 20801373 -51352509 - L2 LINE L2 -10 3303 3182 300 281 0 10 chr20 20801593 20801689 -51352193 + L1MC4 LINE L1 7427 7521 -521 268 263 0 0 chr20 20801691 20801705 -51352177 + MER3 DNA MER1_type 34 47 -162 423 132 132 0 chr20 20801705 20801781 -51352101 - MER3 DNA MER1_type 0 209 124 1061 187 31 8 chr20 20801781 20802038 -51351844 + L1MA7 LINE L1 6017 6279 -12 29 28 0 0 chr20 20802045 20802081 -51351801 + AT_rich Low_complexity Low_complexity 1 36 0 609 217 0 0 chr20 20802081 20802196 -51351686 + FLAM_C SINE Alu 3 117 -26 312 27 0 0 chr20 20802196 20802233 -51351649 + (TAAA)n Simple_repeat Simple_repeat 4 40 0 569 240 40 0 chr20 20802233 20802358 -51351524 - MER3 DNA MER1_type -79 130 1 1118 213 166 0 chr20 20802378 20802655 -51351227 + L1MC4a LINE L1 7481 7803 -5 25 31 0 0 chr20 20802701 20802733 -51351149 + AT_rich Low_complexity Low_complexity 1 32 0 916 334 28 26 chr20 20802793 20803215 -51350667 + HERV16 LTR ERVL 61 483 -4513 1370 297 86 17 chr20 20803248 20803828 -51350054 + HERVL LTR ERVL 2711 3330 -2324 440 210 10 10 chr20 20804118 20804218 -51349664 + HERVL LTR ERVL 3764 3863 -1901 598 324 69 43 chr20 20804583 20805153 -51348729 + HERVL LTR ERVL 4525 5140 -624 3762 167 30 6 chr20 20805153 20805816 -51348066 - LTR58 LTR ERV1 0 679 1 598 324 69 43 chr20 20805816 20806013 -51347869 + HERVL LTR ERVL 5140 5330 -434 482 250 33 20 chr20 20806098 20806250 -51347632 + LTR16A LTR ERVL 196 349 -101 1429 221 206 17 chr20 20806253 20806728 -51347154 + MLT1F1 LTR MaLR 3 567 0 286 309 21 0 chr20 20806728 20806822 -51347060 + LTR16A LTR ERVL 349 444 -6 462 254 8 8 chr20 20807161 20807283 -51346599 + MIR SINE MIR 136 257 -5 795 256 141 34 chr20 20808364 20808905 -51344977 - L1MC4a LINE L1 -299 5822 5255 4714 194 9 21 chr20 20809063 20810181 -51343701 + L1MA3 LINE L1 3527 4630 -2935 6948 133 27 15 chr20 20810200 20812308 -51341574 + L1MA3 LINE L1 5586 7724 0 2639 166 44 69 chr20 20812625 20813191 -51340691 - MLT2B3 LTR ERVL -2 552 1 216 0 0 0 chr20 20813407 20813431 -51340451 + (TTTTA)n Simple_repeat Simple_repeat 3 26 0 7514 106 13 4 chr20 20813432 20815360 -51338522 - L1PA10 LINE L1 -20 6148 4204 2116 112 0 3 chr20 20815456 20815787 -51338095 - AluSp SINE Alu 0 330 1 225 148 0 98 chr20 20815993 20816054 -51337828 + L1ME2 LINE L1 5972 6026 -138 225 0 0 0 chr20 20816118 20816143 -51337739 + (TAAAA)n Simple_repeat Simple_repeat 3 27 0 203 231 0 0 chr20 20816192 20816231 -51337651 + (CA)n Simple_repeat Simple_repeat 2 40 0 289 237 0 17 chr20 20816231 20816290 -51337592 + Tigger5 DNA MER2_type 1 58 -2265 * 1762 131 25 0 chr20 20816274 20816556 -51337326 + Tigger5 DNA MER2_type 2035 2323 0 27 49 0 0 chr20 20816969 20817010 -51336872 + AT_rich Low_complexity Low_complexity 1 41 0 336 322 7 9 chr20 20817019 20817182 -51336700 + L1MC4a LINE L1 5670 5833 -297 2247 80 28 3 chr20 20817310 20817598 -51336284 - AluSg SINE Alu -15 295 1 1965 141 3 0 chr20 20817873 20818157 -51335725 - AluSx SINE Alu -25 287 3 2028 124 84 32 chr20 20819128 20819474 -51334408 + THE1B LTR MaLR 1 364 0 209 264 19 0 chr20 20819544 20819597 -51334285 + (CA)n Simple_repeat Simple_repeat 1 54 0 444 270 132 53 chr20 20819660 20820131 -51333751 - L1ME4a LINE L1 -4 6117 5610 201 161 0 0 chr20 20820180 20820211 -51333671 + L2 LINE L2 3227 3257 -15 238 291 23 12 chr20 20820211 20820297 -51333585 - L1ME4a LINE L1 -499 5622 5536 1641 122 4 35 chr20 20820351 20820605 -51333277 - AluSx SINE Alu -17 295 50 2018 123 6 35 chr20 20820612 20820930 -51332952 - THE1B LTR MaLR -55 309 1 320 216 163 64 chr20 20820937 20821219 -51332663 - L1ME4a LINE L1 -870 5276 4967 514 211 0 0 chr20 20821436 20821531 -51332351 - FLAM_A SINE Alu -13 129 35 264 314 94 31 chr20 20821630 20821821 -51332061 + MIR SINE MIR 58 260 -2 2059 150 26 58 chr20 20821886 20822313 -51331569 - MLT2D LTR ERVL -1 413 1 12050 209 46 16 chr20 20823225 20827033 -51326849 - L1 LINE L1 -1133 5715 1776 1265 183 0 0 chr20 20827033 20827235 -51326647 + AluJb SINE Alu 87 288 -24 27 29 0 0 chr20 20827235 20827269 -51326613 + AT_rich Low_complexity Low_complexity 1 34 0 4385 259 71 64 chr20 20827291 20827506 -51326376 - L1 LINE L1 -5060 1789 1577 1879 160 0 36 chr20 20827506 20827813 -51326069 - AluSx SINE Alu -16 296 1 4385 259 71 64 chr20 20827813 20829365 -51324517 - L1 LINE L1 -5272 1577 10 4086 187 96 70 chr20 20829369 20829414 -51324468 - L1MDa LINE L1 -4137 2403 2361 207 0 0 0 chr20 20829414 20829437 -51324445 + (TA)n Simple_repeat Simple_repeat 2 24 0 4086 187 96 70 chr20 20829437 20829881 -51324001 - L1MDa LINE L1 -4179 2361 1930 2133 97 7 10 chr20 20829881 20830169 -51323713 - AluSq SINE Alu -26 287 1 4086 187 96 70 chr20 20830169 20830945 -51322937 - L1MDa LINE L1 -4610 1930 1104 450 291 33 22 chr20 20831053 20831235 -51322647 + LTR16C LTR ERVL 287 470 -21 1023 165 0 96 chr20 20831549 20831779 -51322103 + L1PA13 LINE L1 3 210 -7371 * 23160 168 13 6 chr20 20831768 20836250 -51317632 + L1PA13 LINE L1 2409 6930 -671 2268 115 0 0 chr20 20836250 20836554 -51317328 + AluSx SINE Alu 3 306 -6 23160 168 13 6 chr20 20836554 20837226 -51316656 + L1PA13 LINE L1 6930 7596 -5 2504 193 47 33 chr20 20838735 20839315 -51314567 + MER92B LTR ERV1 46 633 -3 638 183 43 55 chr20 20840014 20840178 -51313704 + MER5A DNA MER1_type 14 175 -14 218 298 21 21 chr20 20840375 20840469 -51313413 - MIR SINE MIR -6 256 163 205 322 215 0 chr20 20841536 20841657 -51312225 - MIR3 SINE MIR -31 177 31 441 289 19 38 chr20 20841680 20841839 -51312043 - MER5A DNA MER1_type -22 167 12 1792 149 3 17 chr20 20842214 20842503 -51311379 + AluJb SINE Alu 1 285 -27 215 30 0 30 chr20 20842503 20842536 -51311346 + (TTTAA)n Simple_repeat Simple_repeat 1 32 0 1014 152 0 0 chr20 20842536 20842687 -51311195 + FRAM SINE Alu 1 144 -32 339 226 0 43 chr20 20843113 20843206 -51310676 + MLT1K LTR MaLR 177 265 -323 346 245 20 88 chr20 20843254 20843401 -51310481 - L2 LINE L2 -25 3288 3152 521 235 0 0 chr20 20843486 20843601 -51310281 - MIR SINE MIR -10 252 138 512 299 133 17 chr20 20844450 20844684 -51309198 + MIR SINE MIR 2 262 0 1509 182 3 47 chr20 20844790 20845115 -51308767 + AluJo SINE Alu 1 312 0 309 272 0 68 chr20 20845324 20845344 -51308538 - L1MC4 LINE L1 -1333 6709 6689 2156 80 22 0 chr20 20845344 20845640 -51308242 + AluY SINE Alu 1 302 0 309 272 0 68 chr20 20845640 20845721 -51308161 - L1MC4 LINE L1 -1353 6689 6614 * 314 326 0 0 chr20 20845647 20845736 -51308146 + L1MC4 LINE L1 6614 6702 -1340 259 328 75 22 chr20 20846427 20846561 -51307321 + MIR SINE MIR 94 234 -28 642 174 10 0 chr20 20847418 20847516 -51306366 + AluJo SINE Alu 21 119 -193 1166 142 0 0 chr20 20847527 20847696 -51306186 - AluSg/x SINE Alu -18 292 124 890 179 0 0 chr20 20847715 20847860 -51306022 + AluJo SINE Alu 129 273 -39 219 36 0 0 chr20 20847865 20847893 -51305989 + (TC)n Simple_repeat Simple_repeat 2 29 0 * 435 38 0 0 chr20 20847892 20847945 -51305937 + (TG)n Simple_repeat Simple_repeat 2 54 0 326 270 96 34 chr20 20848463 20848641 -51305241 + MIR SINE MIR 74 262 0 893 270 201 12 chr20 20848961 20849459 -51304423 + L2 LINE L2 2715 3313 0 23 0 0 0 chr20 20849560 20849583 -51304299 + AT_rich Low_complexity Low_complexity 1 23 0 42568 63 3 1 chr20 20849583 20855723 -51298159 - L1PA5 LINE L1 -2 6152 1 493 256 33 11 chr20 20856215 20856395 -51297487 - L1MEc LINE L1 -3965 2756 2573 1587 250 56 7 chr20 20856400 20856812 -51297070 + MER70A LTR ERVL 4 435 -37 281 105 0 0 chr20 20856838 20856876 -51297006 - L1MEc LINE L1 -4001 2539 2502 3541 182 74 100 chr20 20857030 20858295 -51295587 + MER52C LTR ERV1 76 1278 0 996 239 27 0 chr20 20858427 20858649 -51295233 - MSTB LTR MaLR -197 229 2 2246 264 84 30 chr20 20858673 20859449 -51294433 - L1MEc LINE L1 -5524 1019 202 366 270 75 13 chr20 20859449 20859608 -51294274 - L1M4 LINE L1 -2905 3477 3309 235 280 15 2 chr20 20859761 20859856 -51294026 - HAL1 LINE L1 -902 1841 1541 737 217 121 13 chr20 20859904 20860134 -51293748 + MLT1G3 LTR MaLR 151 436 -106 340 285 219 0 chr20 20860159 20860282 -51293600 + MIR SINE MIR 49 198 -64 * 358 309 42 42 chr20 20860276 20860444 -51293438 - MIR SINE MIR -84 178 11 494 266 145 5 chr20 20861262 20861469 -51292413 - MIR SINE MIR -26 236 1 329 217 24 0 chr20 20861542 20861625 -51292257 + MER113 DNA MER1_type? 366 450 -71 211 345 44 9 chr20 20861860 20861973 -51291909 + MIR3 SINE MIR 65 181 -27 2233 151 30 21 chr20 20862065 20862437 -51291445 + THE1C LTR MaLR 1 375 0 916 243 146 27 chr20 20862478 20862882 -51291000 - MER113 DNA MER1_type? 0 521 70 554 282 45 0 chr20 20862893 20863049 -51290833 - MLT1H LTR MaLR -5 544 382 * 1452 260 71 4 chr20 20863013 20863463 -51290419 - Charlie4a DNA MER1_type -7 501 22 314 249 99 86 chr20 20864706 20865088 -51288794 - L1ME4a LINE L1 -3 6118 5732 302 262 110 67 chr20 20866287 20866451 -51287431 - MIR SINE MIR -4 258 88 1966 150 7 7 chr20 20867588 20867888 -51285994 - AluJo SINE Alu -12 300 1 222 342 221 0 chr20 20868455 20868604 -51285278 - MIR SINE MIR -23 239 58 757 210 5 6 chr20 20868610 20868765 -51285117 + MLT1B LTR MaLR 1 139 -251 * 891 191 62 15 chr20 20868751 20869050 -51284832 + LOR1a LTR ERV1 126 497 0 1457 179 12 0 chr20 20869050 20869301 -51284581 + MLT1B LTR MaLR 137 390 0 1306 208 96 16 chr20 20869331 20869644 -51284238 - MLT1F LTR MaLR 0 542 205 560 250 40 45 chr20 20869879 20870055 -51283827 + MIR SINE MIR 31 205 -57 728 121 0 16 chr20 20870101 20870225 -51283657 + (TTCC)n Simple_repeat Simple_repeat 3 124 0 1205 163 51 99 chr20 20870667 20870961 -51282921 - AluJo SINE Alu -12 300 21 1943 123 54 92 chr20 20870999 20871389 -51282493 + THE1C LTR MaLR 1 375 0 1298 286 51 15 chr20 20871494 20871886 -51281996 - LTR16C LTR ERVL -1 490 85 26479 149 31 13 chr20 20872503 20878305 -51275577 + L1PA8A LINE L1 1 5960 -486 1091 160 116 0 chr20 20878306 20878487 -51275395 + ERVL LTR ERVL 4573 4774 -990 498 222 11 0 chr20 20878487 20878577 -51275305 + MLT2B1 LTR ERVL 352 442 -78 24 0 0 0 chr20 20878631 20878655 -51275227 + AT_rich Low_complexity Low_complexity 1 24 0 310 188 0 0 chr20 20878670 20878726 -51275156 + MLT2C2 LTR ERVL 416 464 0 3088 102 20 13 chr20 20879591 20880042 -51273840 + L1MA3 LINE L1 5852 6305 0 528 250 14 29 chr20 20881018 20881158 -51272724 + MIR SINE MIR 60 197 -65 209 360 30 0 chr20 20881192 20881292 -51272590 + L2 LINE L2 3170 3272 0 559 313 96 54 chr20 20881501 20882323 -51271559 + L2 LINE L2 2430 3272 0 423 346 15 0 chr20 20882639 20882775 -51271107 + LTR16C LTR ERVL 114 251 -240 6128 71 0 1 chr20 20882846 20883611 -51270271 - L1PA7 LINE L1 -5 6149 5386 397 155 14 0 chr20 20883611 20883682 -51270200 + Tigger6 DNA MER2_type 1433 1504 -93 192 40 0 0 chr20 20883805 20883830 -51270052 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 387 43 14 57 chr20 20883842 20883912 -51269970 - L1PA4 LINE L1 -2 6153 6087 3813 64 11 40 chr20 20883912 20884456 -51269426 - L1P LINE L1 -768 5378 4851 3209 108 0 0 chr20 20884454 20884907 -51268975 + L1P LINE L1 4418 4870 -1276 * 419 254 15 23 chr20 20886477 20886607 -51267275 - LTR67 LTR ERVL 0 557 429 902 288 50 20 chr20 20886980 20887282 -51266600 + LTR16C LTR ERVL 181 491 0 347 342 38 41 chr20 20888870 20889209 -51264673 - MER110-int LTR ERV1 -2205 2442 2105 275 303 22 34 chr20 20889620 20889709 -51264173 + L2 LINE L2 3008 3095 -177 1365 143 9 19 chr20 20889812 20890028 -51263854 - L1MB5 LINE L1 -8 6166 5953 663 266 131 5 chr20 20890157 20890356 -51263526 + MIR SINE MIR 15 238 -24 237 314 14 0 chr20 20890640 20890710 -51263172 + L2 LINE L2 3193 3263 -50 238 356 93 0 chr20 20892085 20892203 -51261679 - MIR SINE MIR -111 151 23 1200 256 59 28 chr20 20892603 20892994 -51260888 - LTR16A1 LTR ERVL -5 452 50 1638 203 124 6 chr20 20893097 20893451 -51260431 + MSTD LTR MaLR 1 396 0 224 374 15 38 chr20 20894166 20894297 -51259585 - MIR3 SINE MIR -51 157 30 748 279 116 50 chr20 20894376 20894756 -51259126 + LTR16C LTR ERVL 87 491 0 562 244 8 0 chr20 20894826 20894957 -51258925 - MLT2F LTR ERVL 0 663 532 324 102 0 0 chr20 20895659 20895708 -51258174 + (GA)n Simple_repeat Simple_repeat 1 49 0 33 0 0 0 chr20 20895828 20895861 -51258021 + AT_rich Low_complexity Low_complexity 1 33 0 1268 220 150 37 chr20 20895881 20896362 -51257520 + MLT1H LTR MaLR 13 547 -2 205 270 160 76 chr20 20897610 20897847 -51256035 + L2 LINE L2 2922 3178 -94 304 221 53 21 chr20 20898229 20898324 -51255558 + MIR SINE MIR 121 218 -44 227 244 22 22 chr20 20898989 20899001 -51254881 + CT-rich Low_complexity Low_complexity 4 15 -78 2879 162 71 82 chr20 20899001 20899646 -51254236 + LTR8A LTR ERV1 1 639 -88 2101 130 0 13 chr20 20899646 20899946 -51253936 - AluSg SINE Alu -14 296 1 2879 162 71 82 chr20 20899946 20900035 -51253847 + LTR8A LTR ERV1 639 727 0 227 244 22 22 chr20 20900035 20900112 -51253770 + CT-rich Low_complexity Low_complexity 14 93 0 294 318 12 12 chr20 20900155 20900240 -51253642 - L2 LINE L2 -19 3253 3169 736 280 34 13 chr20 20900883 20901119 -51252763 + MIR SINE MIR 1 241 -21 267 279 153 0 chr20 20901144 20901255 -51252627 + L2 LINE L2 3137 3264 -8 851 277 21 0 chr20 20901904 20902142 -51251740 - MIR SINE MIR -8 254 12 6853 165 18 12 chr20 20902672 20903425 -51250457 + L1PA12 LINE L1 6 770 -6811 1766 176 23 13 chr20 20903425 20903732 -51250150 - AluSx SINE Alu -2 310 1 6853 165 18 12 chr20 20903732 20904103 -51249779 + L1PA12 LINE L1 770 1137 -6444 6787 193 28 39 chr20 20904113 20904781 -51249101 + L1P LINE L1 2843 3517 -2629 2358 129 33 30 chr20 20904781 20905144 -51248738 + THE1B LTR MaLR 1 364 0 6787 193 28 39 chr20 20905144 20906023 -51247859 + L1P LINE L1 3517 4372 -1774 1677 185 3 11 chr20 20906230 20906517 -51247365 + AluJo SINE Alu 3 287 -25 186 43 0 0 chr20 20906520 20906543 -51247339 + (CAA)n Simple_repeat Simple_repeat 2 24 0 306 290 110 0 chr20 20906573 20906673 -51247209 + MIR SINE MIR 134 244 -18 723 195 68 21 chr20 20908083 20908273 -51245609 - Charlie4a DNA MER1_type 0 508 310 1620 212 129 8 chr20 20908299 20908686 -51245196 - L1MD3 LINE L1 -10 7985 7552 954 220 59 28 chr20 20908749 20909035 -51244847 - Charlie4a DNA MER1_type -197 311 17 387 0 0 0 chr20 20909308 20909351 -51244531 + (TG)n Simple_repeat Simple_repeat 2 44 0 340 302 195 0 chr20 20909664 20909823 -51244059 - MIR SINE MIR -72 190 1 2235 66 45 3 chr20 20910474 20910762 -51243120 + AluY SINE Alu 1 300 -11 1325 220 75 8 chr20 20910778 20911325 -51242557 - MLT1E1 LTR MaLR -10 644 3 549 139 79 0 chr20 20911953 20912054 -51241828 + L1MA9 LINE L1 6198 6306 -6 229 256 12 105 chr20 20912720 20912806 -51241076 - L2 LINE L2 -2 3311 3234 261 258 153 0 chr20 20913182 20913306 -51240576 + L1ME4a LINE L1 5978 6120 -1 23 0 0 0 chr20 20913856 20913879 -51240003 + AT_rich Low_complexity Low_complexity 1 23 0 746 330 17 10 chr20 20914299 20914590 -51239292 - L3 LINE CR1 -67 1510 1218 997 248 51 94 chr20 20915836 20916414 -51237468 + MLT1H1 LTR MaLR 1 555 0 245 274 55 0 chr20 20916422 20916495 -51237387 - MER5C DNA MER1_type -200 124 48 1570 204 7 0 chr20 20918323 20918738 -51235144 + AluJo SINE Alu 1 417 0 486 192 92 0 chr20 20918817 20918937 -51234945 + L1ME LINE L1 5575 5705 -416 259 309 0 0 chr20 20918939 20919007 -51234875 + L2 LINE L2 3246 3313 0 324 354 15 0 chr20 20919012 20919142 -51234740 + L1ME LINE L1 5691 5822 -299 23 0 0 0 chr20 20919147 20919170 -51234712 + AT_rich Low_complexity Low_complexity 1 23 0 377 282 243 34 chr20 20919541 20919747 -51234135 - MIR SINE MIR 0 262 14 497 148 0 12 chr20 20919958 20920039 -51233843 - MADE1 DNA Mariner 0 80 1 23 0 0 0 chr20 20920490 20920513 -51233369 + AT_rich Low_complexity Low_complexity 1 23 0 2676 153 8 44 chr20 20922234 20922710 -51231172 + LTR9 LTR ERV1 1 459 -153 181 0 0 65 chr20 20924073 20924104 -51229778 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 216 0 0 0 chr20 20924205 20924229 -51229653 + (T)n Simple_repeat Simple_repeat 1 24 0 369 271 96 16 chr20 20924384 20924572 -51229310 + L1M4 LINE L1 2962 3164 -2982 521 305 90 66 chr20 20924728 20925275 -51228607 + L1M4 LINE L1 3599 4158 -1988 305 177 0 16 chr20 20925267 20925329 -51228553 - L1MC4 LINE L1 -1334 6708 6648 * 235 292 0 0 chr20 20925347 20925436 -51228446 - L1MC4 LINE L1 -1339 6703 6615 477 250 0 0 chr20 20925444 20925584 -51228298 + (TA)n Simple_repeat Simple_repeat 1 140 0 308 326 0 0 chr20 20925594 20925683 -51228199 + L1MC4 LINE L1 6615 6703 -1339 32 0 0 0 chr20 20925828 20925860 -51228022 + AT_rich Low_complexity Low_complexity 1 32 0 23 33 0 0 chr20 20925894 20925924 -51227958 + AT_rich Low_complexity Low_complexity 1 30 0 304 258 91 53 chr20 20926002 20926134 -51227748 + HAL1 LINE L1 4 140 -2367 692 266 109 39 chr20 20926421 20926860 -51227022 + LTR33 LTR ERVL 48 517 -4 431 284 249 10 chr20 20927195 20927392 -51226490 + MIR SINE MIR 19 262 0 443 328 62 17 chr20 20927661 20927838 -51226044 + MIR3 SINE MIR 20 204 -4 214 381 42 17 chr20 20929443 20929561 -51224321 - L2 LINE L2 -36 3236 3116 6532 117 26 31 chr20 20930044 20931120 -51222762 - MER11C LTR ERVK 0 1071 1 689 307 4 31 chr20 20931650 20931878 -51222004 - MIR SINE MIR 0 262 41 276 100 0 0 chr20 20931907 20931947 -51221935 + (T)n Simple_repeat Simple_repeat 1 40 0 508 183 34 115 chr20 20931990 20932198 -51221684 + MER102b DNA MER1_type 151 341 0 488 268 7 65 chr20 20933754 20933796 -51220086 - MER5A DNA MER1_type 0 189 146 1953 154 9 46 chr20 20933796 20934146 -51219736 - MER1B DNA MER1_type 0 337 1 488 268 7 65 chr20 20934146 20934241 -51219641 - MER5A DNA MER1_type -43 146 60 405 0 0 0 chr20 20934287 20934332 -51219550 + (TG)n Simple_repeat Simple_repeat 1 45 0 28 29 0 0 chr20 20935540 20935575 -51218307 + AT_rich Low_complexity Low_complexity 1 35 0 402 186 158 23 chr20 20935773 20935918 -51217964 - MIR SINE MIR -54 208 50 358 322 64 18 chr20 20937246 20937439 -51216443 + MIR SINE MIR 3 201 -61 2190 23 0 0 chr20 20937833 20938096 -51215786 - L1PA5 LINE L1 -113 6041 5779 810 21 0 0 chr20 20938096 20938188 -51215694 + L1PA5 LINE L1 6053 6145 -9 236 219 0 14 chr20 20938841 20938914 -51214968 + (TGAA)n Simple_repeat Simple_repeat 1 72 0 202 300 0 0 chr20 20939348 20939398 -51214484 + MIR SINE MIR 66 115 -93 241 330 80 0 chr20 20939838 20939950 -51213932 + L2 LINE L2 3148 3268 -4 1311 223 61 9 chr20 20940469 20940814 -51213068 + L1M2 LINE L1 1 363 -6667 * 3761 183 46 63 chr20 20940812 20942285 -51211597 + L1M2 LINE L1 5058 6441 -743 252 209 202 23 chr20 20942483 20942612 -51211270 - MER103 DNA DNA -2 164 13 428 290 65 85 chr20 20942699 20942947 -51210935 + MIR SINE MIR 12 254 -8 201 372 64 0 chr20 20943845 20943939 -51209943 + MER5B DNA MER1_type 7 106 -72 1112 162 28 14 chr20 20944844 20945060 -51208822 - MER20 DNA MER1_type 0 219 1 2963 192 18 15 chr20 20945178 20945838 -51208044 - L1MB7 LINE L1 -15 6169 5508 394 343 130 0 chr20 20946604 20946817 -51207065 - MIR SINE MIR -17 245 5 458 176 141 9 chr20 20947128 20947251 -51206631 + MIR SINE MIR 13 152 -56 713 216 91 57 chr20 20947261 20947847 -51206035 - LTR48B LTR ERV1 -4 729 1 205 337 24 12 chr20 20947878 20947961 -51205921 + MIR SINE MIR 151 234 -28 612 238 24 73 chr20 20948458 20948664 -51205218 - MIR SINE MIR -1 261 66 1662 206 40 11 chr20 20948872 20949251 -51204631 + MLT1B LTR MaLR 1 390 0 600 210 45 6 chr20 20949331 20949488 -51204394 + L1MB3 LINE L1 5088 5250 -896 353 165 253 11 chr20 20949492 20949583 -51204299 + LTR7 LTR ERV1 1 113 -337 1346 114 9 9 chr20 20949585 20949805 -51204077 + LTR7 LTR ERV1 231 450 0 3582 165 58 53 chr20 20949815 20950732 -51203150 + L1MB3 LINE L1 5260 6176 -7 1445 285 53 20 chr20 20950889 20951775 -51202107 + L1ME3A LINE L1 5030 5947 -223 241 259 0 25 chr20 20952441 20952522 -51201360 + MLT1L LTR MaLR 422 500 -115 1208 288 44 15 chr20 20952813 20953268 -51200614 - MLT1J LTR MaLR -20 491 24 558 0 0 0 chr20 20953544 20953606 -51200276 + (TTTC)n Simple_repeat Simple_repeat 4 65 0 1881 157 58 32 chr20 20954211 20954751 -51199131 + MLT2A2 LTR ERVL 1 554 0 344 330 68 57 chr20 20955106 20955300 -51198582 - L1M4 LINE L1 -1200 4946 4745 2131 127 6 13 chr20 20955300 20955614 -51198268 - AluSx SINE Alu 0 312 1 344 330 68 57 chr20 20955614 20955789 -51198093 - L1M4 LINE L1 -1401 4745 4573 26 50 0 0 chr20 20955989 20956029 -51197853 + AT_rich Low_complexity Low_complexity 1 40 0 331 243 103 18 chr20 20956029 20956196 -51197686 - L1MC4 LINE L1 -143 7899 7609 1523 171 119 29 chr20 20956284 20956663 -51197219 - L1MB7 LINE L1 -38 6146 5734 239 285 47 50 chr20 20957445 20957743 -51196139 - L1M4 LINE L1 -1822 4324 4028 249 33 0 0 chr20 20958033 20958063 -51195819 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 1726 170 7 0 chr20 20958063 20958339 -51195543 - AluSx SINE Alu -34 278 1 180 183 290 21 chr20 20960904 20960997 -51192885 + MER5A DNA MER1_type 41 158 -31 * 459 266 11 0 chr20 20960937 20961031 -51192851 - MER5A DNA MER1_type -86 103 9 229 299 0 39 chr20 20961447 20961524 -51192358 + G-rich Low_complexity Low_complexity 1 74 0 636 203 45 31 chr20 20961777 20962085 -51191797 - L1ME2 LINE L1 -9 6155 5770 1533 152 7 7 chr20 20962091 20962368 -51191514 + L1M3e LINE L1 1 277 -6753 268 143 20 0 chr20 20962374 20962423 -51191459 - MSTB2 LTR MaLR 0 457 408 1636 174 0 29 chr20 20962449 20962730 -51191152 + AluJo SINE Alu 1 273 -39 451 126 0 92 chr20 20962762 20962849 -51191033 - MLT1A1 LTR MaLR -171 194 116 1818 149 16 9 chr20 20962854 20963301 -51190581 + L1MA8 LINE L1 5024 5474 -749 28 0 0 0 chr20 20963301 20963329 -51190553 + AT_rich Low_complexity Low_complexity 1 28 0 8534 23 1 0 chr20 20963329 20965104 -51188778 - L1PA3 LINE L1 -3 6152 4377 3112 24 0 3 chr20 20965104 20965485 -51188397 + L1P LINE L1 3921 4300 -1846 4089 145 44 20 chr20 20965485 20966263 -51187619 + L1MA8 LINE L1 5461 6265 -26 234 0 0 0 chr20 20966263 20966289 -51187593 + (TG)n Simple_repeat Simple_repeat 2 27 0 4089 145 44 20 chr20 20966289 20966307 -51187575 + L1MA8 LINE L1 6265 6281 -10 240 290 27 0 chr20 20966716 20966836 -51187046 + MLT1E LTR MaLR 20 183 -366 258 139 0 0 chr20 20966878 20966921 -51186961 + L2 LINE L2 2928 2970 -302 229 387 99 0 chr20 20966920 20967031 -51186851 + L2 LINE L2 3192 3313 0 * 2051 128 20 0 chr20 20967298 20967602 -51186280 + AluSx SINE Alu 3 312 0 411 324 6 6 chr20 20967714 20967893 -51185989 + (CA)n Simple_repeat Simple_repeat 2 180 0 1764 46 0 0 chr20 20968531 20968748 -51185134 - L1PA4 LINE L1 -3 6152 5936 2018 96 52 0 chr20 20969236 20969506 -51184376 + AluSx SINE Alu 1 284 -28 429 70 0 0 chr20 20970123 20970180 -51183702 + (TA)n Simple_repeat Simple_repeat 1 57 0 304 136 15 15 chr20 20971368 20971434 -51182448 + CT-rich Low_complexity Low_complexity 3 68 0 285 319 55 11 chr20 20971462 20971553 -51182329 - L2 LINE L2 -50 3263 3169 14086 145 24 5 chr20 20971558 20973931 -51179951 - Tigger1 DNA MER2_type 0 2418 1 245 29 29 0 chr20 20973938 20973972 -51179910 + (GA)n Simple_repeat Simple_repeat 2 36 0 263 169 0 84 chr20 20974567 20974638 -51179244 - MER103 DNA DNA -54 112 48 1743 142 17 13 chr20 20974718 20975020 -51178862 - MER1B DNA MER1_type 0 339 37 1107 168 84 15 chr20 20975043 20975246 -51178636 + U3 snRNA snRNA 1 217 0 740 188 9 13 chr20 20975255 20975485 -51178397 + GA-rich Low_complexity Low_complexity 1 228 0 930 167 0 0 chr20 20975499 20975728 -51178154 + GA-rich Low_complexity Low_complexity 1 229 0 758 277 62 30 chr20 20976354 20976711 -51177171 - LTR16A1 LTR ERVL 0 457 106 2345 85 3 23 chr20 20978691 20978996 -51174886 + AluSg SINE Alu 1 299 -11 943 297 146 11 chr20 20979271 20979729 -51174153 - MLT1H LTR MaLR -18 531 12 235 224 20 0 chr20 20980415 20980464 -51173418 - LTR16C LTR ERVL 0 491 442 192 152 0 0 chr20 20980619 20980652 -51173230 + (CATATA)n Simple_repeat Simple_repeat 5 37 0 3058 191 54 7 chr20 20980652 20981228 -51172654 + MER21B LTR ERV1 15 617 -246 501 292 88 22 chr20 20981257 20981483 -51172399 + MLT1H LTR MaLR 109 349 -200 2959 87 5 24 chr20 20981525 20981950 -51171932 + L1P4 LINE L1 5373 5789 -374 6135 195 56 71 chr20 20981950 20983703 -51170179 - MER52A LTR ERV1 0 1755 29 2897 79 3 3 chr20 20983943 20984312 -51169570 + L1PA13 LINE L1 5784 6152 -11 431 141 22 43 chr20 20984315 20984407 -51169475 + Charlie5 DNA MER1_type 2513 2602 -10 1907 144 10 0 chr20 20987552 20987843 -51166039 + AluSx SINE Alu 1 294 -18 264 215 31 0 chr20 20988240 20988305 -51165577 + MER94 DNA DNA 4 70 -64 1590 230 52 5 chr20 20988326 20988709 -51165173 + MLT1C LTR MaLR 13 413 -54 314 324 36 46 chr20 20989050 20989270 -51164612 - MIR SINE MIR -42 220 4 1433 275 67 53 chr20 20989673 20990237 -51163645 + MER50 LTR ERV1 3 574 -160 263 295 0 0 chr20 20991221 20991316 -51162566 + A-rich Low_complexity Low_complexity 1 95 0 3247 191 24 88 chr20 20991940 20992772 -51161110 - MER4E LTR ERV1 0 779 1 2984 233 52 17 chr20 20992948 20993778 -51160104 - L1ME2 LINE L1 -32 6132 5274 2735 235 86 24 chr20 20993796 20994523 -51159359 - L1ME2 LINE L1 -924 5222 4541 8996 170 8 22 chr20 20994523 20995599 -51158283 - L1PA13 LINE L1 -4 6159 5070 2129 154 73 14 chr20 20995599 20995943 -51157939 + THE1B LTR MaLR 1 364 0 12475 96 4 1 chr20 20995943 20997519 -51156363 + THE1B-int LTR MaLR 1 1580 0 2128 148 72 17 chr20 20997519 20997864 -51156018 + THE1B LTR MaLR 1 364 0 8996 170 8 22 chr20 20997864 20999169 -51154713 - L1PA13 LINE L1 -1090 5073 3765 2735 235 86 24 chr20 20999169 20999493 -51154389 - L1ME2 LINE L1 -1605 4541 4106 428 309 97 31 chr20 20999660 20999919 -51153963 + L2 LINE L2 2995 3270 -43 3403 104 20 0 chr20 21000210 21000651 -51153231 - MLT2A2 LTR ERVL -3 450 1 1401 206 84 12 chr20 21000804 21001123 -51152759 - MLT1A1 LTR MaLR 0 428 23 635 186 16 24 chr20 21001492 21001616 -51152266 - L1PA16 LINE L1 -14 6152 6030 458 291 17 41 chr20 21002420 21002592 -51151290 + MIR3 SINE MIR 14 181 -27 319 346 0 0 chr20 21002627 21002705 -51151177 - L3 LINE CR1 -88 1489 1412 22 0 0 0 chr20 21002967 21002989 -51150893 + AT_rich Low_complexity Low_complexity 1 22 0 299 305 156 13 chr20 21003026 21003180 -51150702 - MIR3 SINE MIR -3 205 30 186 43 0 0 chr20 21003316 21003339 -51150543 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 1988 206 130 0 chr20 21003831 21004238 -51149644 + MER74C LTR ERVL 1 460 0 289 259 147 94 chr20 21005388 21005569 -51148313 - MIR SINE MIR -56 206 19 246 186 0 34 chr20 21005593 21005652 -51148230 + (TATG)n Simple_repeat Simple_repeat 2 58 0 1573 197 15 82 chr20 21005854 21006255 -51147627 - MLT1A2 LTR MaLR 0 374 1 1938 205 87 21 chr20 21006255 21006305 -51147577 - MLT1A2-int LTR MaLR 0 1735 1690 2060 128 7 7 chr20 21006305 21006610 -51147272 - AluSc SINE Alu -4 305 1 1938 205 87 21 chr20 21006610 21007101 -51146781 - MLT1A2-int LTR MaLR -45 1690 679 3239 218 35 5 chr20 21007626 21008260 -51145622 + MER82 DNA MER2_type 1 653 0 259 254 216 50 chr20 21008786 21008967 -51144915 - MIR SINE MIR -6 256 46 2598 113 54 0 chr20 21009568 21009938 -51143944 - MLT1B LTR MaLR 0 390 1 187 162 27 27 chr20 21011162 21011199 -51142683 + L2 LINE L2 3210 3246 -26 30 59 0 0 chr20 21011399 21011450 -51142432 + AT_rich Low_complexity Low_complexity 1 51 0 2526 249 56 36 chr20 21011887 21012846 -51141036 + L1ME1 LINE L1 5187 6161 -5 245 262 149 48 chr20 21013057 21013225 -51140657 - L2 LINE L2 -175 3097 2913 1118 243 57 25 chr20 21013397 21013751 -51140131 + L1MC4a LINE L1 7033 7397 -411 1498 225 8 54 chr20 21013760 21013973 -51139909 - MLT1A1 LTR MaLR -13 352 162 2411 95 0 0 chr20 21013973 21014277 -51139605 - AluSx SINE Alu -7 305 2 1498 225 8 54 chr20 21014277 21014432 -51139450 - MLT1A1 LTR MaLR -203 162 1 1909 212 24 19 chr20 21014436 21014861 -51139021 + L1MD3 LINE L1 7569 7995 0 1203 195 18 5 chr20 21016526 21016800 -51137082 + L1ME2 LINE L1 5545 5822 -342 1110 206 59 47 chr20 21016806 21017146 -51136736 - LTR48B LTR ERV1 0 644 301 * 2115 130 21 8 chr20 21017139 21017547 -51136335 - LTR49 LTR ERV1 -128 659 23 965 240 53 20 chr20 21017547 21017792 -51136090 - MER4D LTR ERV1 0 903 651 4034 162 21 13 chr20 21017792 21018509 -51135373 - MER50 LTR ERV1 0 734 12 565 184 0 9 chr20 21018515 21018624 -51135258 - MER4D LTR ERV1 -249 654 547 395 209 0 7 chr20 21018622 21018737 -51135145 - MER4E LTR ERV1 -588 284 62 * 1551 157 27 37 chr20 21018723 21019017 -51134865 - MER49 LTR ERV1 -629 294 4 1015 250 24 12 chr20 21019022 21019355 -51134527 + L1ME2 LINE L1 5835 6332 -2 977 221 43 29 chr20 21019466 21019674 -51134208 - MER58A DNA MER1_type -8 216 6 404 282 43 69 chr20 21019829 21020230 -51133652 + L1MC5 LINE L1 7246 7509 -452 1192 229 104 48 chr20 21020275 21020650 -51133232 + MSTD LTR MaLR 1 396 0 309 301 107 11 chr20 21020712 21020880 -51133002 + L1MC4 LINE L1 7738 7941 -101 2268 123 0 0 chr20 21020880 21021190 -51132692 + AluY SINE Alu 2 311 0 309 301 107 11 chr20 21021190 21021283 -51132599 + L1MC4 LINE L1 7941 8024 -18 3223 115 56 4 chr20 21021456 21021918 -51131964 - L1PA8A LINE L1 -1 6130 5645 534 181 11 0 chr20 21021918 21022012 -51131870 - ERVL LTR ERVL -1194 4570 4476 287 235 13 21 chr20 21022003 21022095 -51131787 - ERVL LTR ERVL -5395 267 170 * 529 303 88 52 chr20 21022095 21022416 -51131466 + L1ME LINE L1 4075 4418 -1728 2401 114 12 0 chr20 21022416 21022758 -51131124 + L1PA14 LINE L1 5816 6161 0 529 303 88 52 chr20 21022758 21022879 -51131003 + L1ME LINE L1 4418 4533 -1613 287 246 82 71 chr20 21022891 21023074 -51130808 + L1ME LINE L1 5609 5763 -399 1141 0 29 0 chr20 21023387 21023526 -51130356 + (TTTTA)n Simple_repeat Simple_repeat 4 146 0 1750 172 4 0 chr20 21023528 21023807 -51130075 - AluJb SINE Alu -32 280 1 192 236 101 90 chr20 21024002 21024091 -51129791 + L2 LINE L2 3171 3260 -12 2376 66 0 26 chr20 21024952 21025254 -51128628 - AluY SINE Alu 0 311 18 405 58 0 0 chr20 21025349 21025401 -51128481 + (CA)n Simple_repeat Simple_repeat 2 53 0 297 229 157 78 chr20 21025581 21025734 -51128148 - MIR SINE MIR -89 173 9 2117 142 0 0 chr20 21026642 21026952 -51126930 + AluSg SINE Alu 1 310 0 315 321 154 36 chr20 21027043 21027373 -51126509 - L2 LINE L2 0 3313 2945 22 35 0 0 chr20 21027512 21027541 -51126341 + AT_rich Low_complexity Low_complexity 1 29 0 196 225 0 0 chr20 21027549 21027589 -51126293 - MIR SINE MIR -151 111 72 270 320 10 21 chr20 21028854 21028951 -51124931 + L2 LINE L2 3137 3232 -40 291 319 52 26 chr20 21029077 21029193 -51124689 - MIR3 SINE MIR -12 196 78 282 281 107 16 chr20 21029464 21029585 -51124297 + L2 LINE L2 3182 3313 0 201 159 0 0 chr20 21032293 21032337 -51121545 + A-rich Low_complexity Low_complexity 1 44 0 337 389 35 20 chr20 21032576 21032774 -51121108 + MIR3 SINE MIR 6 206 -2 379 283 9 0 chr20 21034234 21034347 -51119535 - MER94 DNA DNA -17 117 4 1251 199 75 15 chr20 21037812 21038143 -51115739 + MLT1A1 LTR MaLR 15 365 0 1624 230 93 51 chr20 21038365 21038934 -51114948 + MLT1G1 LTR MaLR 3 595 0 2272 125 0 0 chr20 21039369 21039673 -51114209 - AluSx SINE Alu -8 304 1 4254 197 10 25 chr20 21040635 21041135 -51112747 + L1 LINE L1 2611 3117 -3029 2113 134 0 0 chr20 21041135 21041419 -51112463 + AluSg SINE Alu 12 295 -15 4254 197 10 25 chr20 21041419 21041958 -51111924 + L1 LINE L1 3117 3634 -2512 194 328 9 86 chr20 21042987 21043103 -51110779 + MIR3 SINE MIR 65 171 -37 1564 253 52 37 chr20 21043110 21043274 -51110608 + L1ME3A LINE L1 5560 5720 -450 1205 197 170 58 chr20 21043274 21043726 -51110156 + MLT1D LTR MaLR 3 505 0 1564 253 52 37 chr20 21043726 21044158 -51109724 + L1ME3A LINE L1 5720 6165 -5 1931 154 0 0 chr20 21044177 21044475 -51109407 + AluJo SINE Alu 1 298 -14 627 26 0 0 chr20 21045910 21045987 -51107895 - L1PA4 LINE L1 -8 6147 6071 627 248 39 63 chr20 21046024 21046102 -51107780 - MIR SINE MIR -6 256 178 795 294 85 43 chr20 21046102 21046572 -51107310 + LTR16C LTR ERVL 2 491 0 627 248 39 63 chr20 21046572 21046639 -51107243 - MIR SINE MIR -84 178 115 1721 193 42 8 chr20 21046639 21046992 -51106890 + MLT1A1 LTR MaLR 1 365 0 627 248 39 63 chr20 21046992 21047051 -51106831 - MIR SINE MIR -147 115 56 1391 169 35 12 chr20 21048362 21048617 -51105265 + AluJo SINE Alu 46 306 -6 714 58 0 29 chr20 21049697 21049800 -51104082 - L1PA4 LINE L1 0 6155 6056 285 291 75 22 chr20 21050347 21050481 -51103401 + MIR3 SINE MIR 23 163 -45 652 252 100 98 chr20 21050955 21051483 -51102399 + MLT1H1 LTR MaLR 26 554 -1 5450 142 9 27 chr20 21052093 21052494 -51101388 - L1P4 LINE L1 -437 5726 5319 2377 74 0 3 chr20 21052494 21052791 -51101091 + AluY SINE Alu 1 296 -15 5450 142 9 27 chr20 21052791 21053822 -51100060 - L1P4 LINE L1 -844 5319 4313 3029 94 25 0 chr20 21053822 21054250 -51099632 + L1PA13 LINE L1 5713 6157 -6 1102 140 109 8 chr20 21054279 21054536 -51099346 - L1MC2 LINE L1 -9 6335 6053 7940 173 97 65 chr20 21054537 21055066 -51098816 - L1MC3 LINE L1 -31 8172 7662 253 322 0 0 chr20 21055066 21055156 -51098726 - MLT1F1 LTR MaLR -442 125 36 7940 173 97 65 chr20 21055156 21056932 -51096950 - L1MC3 LINE L1 -541 7662 5701 41808 40 4 1 chr20 21056936 21063064 -51090818 - L1PA3 LINE L1 0 6155 12 1118 249 6 0 chr20 21063065 21063395 -51090487 - L1MC3 LINE L1 -846 5718 5387 * 4001 233 114 23 chr20 21063394 21064963 -51088919 - L1MC3 LINE L1 -2473 4091 2315 2871 0 0 3 chr20 21064963 21065275 -51088607 - AluYa5 SINE Alu 0 311 1 4001 233 114 23 chr20 21065275 21065612 -51088270 - L1MC3 LINE L1 -4249 2315 2010 1790 163 3 7 chr20 21065612 21065894 -51087988 - AluJo SINE Alu -31 281 1 6147 144 19 61 chr20 21065918 21066221 -51087661 - Tigger3b DNA MER2_type -1802 1226 912 3410 125 15 4 chr20 21066221 21066758 -51087124 + L1PA15 LINE L1 5620 6162 -3 6147 144 19 61 chr20 21066758 21067497 -51086385 - Tigger3b DNA MER2_type -2116 912 245 2332 86 3 0 chr20 21067497 21067787 -51086095 + AluSc SINE Alu 1 291 -18 6147 144 19 61 chr20 21067787 21068023 -51085859 - Tigger3b DNA MER2_type -2783 245 1 3359 198 26 36 chr20 21068027 21068215 -51085667 - L1MC3 LINE L1 -4494 2070 1882 963 114 0 0 chr20 21068215 21068347 -51085535 - FLAM_C SINE Alu 0 133 2 3359 198 26 36 chr20 21068347 21069276 -51084606 - L1MC3 LINE L1 -4682 1882 813 905 227 35 63 chr20 21069295 21069612 -51084270 - L1MC3 LINE L1 -5630 415 108 2392 103 0 0 chr20 21069944 21070254 -51083628 - AluSg SINE Alu 0 310 1 272 242 83 76 chr20 21070915 21071047 -51082835 - MIR3 SINE MIR -25 183 51 343 376 19 12 chr20 21072234 21072396 -51081486 + L2 LINE L2 2928 3090 -182 * 743 268 18 53 chr20 21072394 21072622 -51081260 + L2 LINE L2 2240 2459 -855 1001 276 68 16 chr20 21072622 21073046 -51080836 - LTR16A1 LTR ERVL 0 457 12 1564 276 99 4 chr20 21073755 21073774 -51080108 + MLT1G1 LTR MaLR 1 17 -578 258 32 0 0 chr20 21073774 21073805 -51080077 + (GAAAA)n Simple_repeat Simple_repeat 2 32 0 1564 276 99 4 chr20 21073805 21074321 -51079561 + MLT1G1 LTR MaLR 17 587 -8 2221 261 69 64 chr20 21074608 21075742 -51078140 + L2 LINE L2 2156 3312 -1 645 316 136 35 chr20 21075752 21076429 -51077453 + L2 LINE L2 2221 2965 -349 285 29 0 0 chr20 21076951 21076985 -51076897 + (TG)n Simple_repeat Simple_repeat 2 35 0 916 239 54 29 chr20 21076997 21077374 -51076508 - MLT2D LTR ERVL -69 395 14 235 217 17 17 chr20 21077712 21077772 -51076110 + LTR16A1 LTR ERVL 395 454 -3 1561 112 181 8 chr20 21078559 21078818 -51075064 - AluSg1 SINE Alu -5 304 1 216 356 37 37 chr20 21079429 21079592 -51074290 - L2 LINE L2 -552 2762 2600 254 326 63 11 chr20 21079890 21079985 -51073897 + MIR3 SINE MIR 85 184 -24 6754 56 4 37 chr20 21081108 21082757 -51071125 + L1PA7 LINE L1 4517 6141 -13 386 216 0 0 chr20 21082807 21082895 -51070987 + MER94 DNA DNA 13 100 -34 469 326 57 11 chr20 21083298 21083473 -51070409 - MIR3 SINE MIR -21 187 5 24 0 0 0 chr20 21083508 21083532 -51070350 + AT_rich Low_complexity Low_complexity 1 24 0 389 264 115 29 chr20 21083570 21083778 -51070104 - L1ME4a LINE L1 -58 6063 5838 1073 284 56 33 chr20 21084038 21084553 -51069329 + L1MC4a LINE L1 5407 5933 -1875 568 318 131 4 chr20 21085661 21085906 -51067976 + LTR16C LTR ERVL 82 357 -134 352 372 62 42 chr20 21085938 21086339 -51067543 + L1MEd LINE L1 3 411 -5708 912 277 86 58 chr20 21086412 21087582 -51066300 + L1MEd LINE L1 458 1712 -4598 534 226 38 19 chr20 21087779 21087938 -51065944 + L1ME3A LINE L1 6008 6169 -1 353 303 86 46 chr20 21088288 21088612 -51065270 + L1MEd LINE L1 2278 2614 -3515 3076 63 47 0 chr20 21088633 21089059 -51064823 - L1PA7 LINE L1 -301 5853 5408 2381 52 0 0 chr20 21089059 21089349 -51064533 + L1PA7 LINE L1 5847 6137 -17 1895 245 75 30 chr20 21090227 21090826 -51063056 - MLT1E2 LTR MaLR 0 626 1 863 297 72 11 chr20 21091384 21091761 -51062121 - LTR16C LTR ERVL -11 480 81 873 256 49 49 chr20 21092653 21093020 -51060862 - L1ME1 LINE L1 -5 6161 5795 1462 204 62 73 chr20 21093073 21093539 -51060343 - MLT1C LTR MaLR 0 467 7 6870 24 0 0 chr20 21095908 21096705 -51057177 + L1PA4 LINE L1 5356 6152 -3 25 0 0 0 chr20 21097159 21097184 -51056698 + AT_rich Low_complexity Low_complexity 1 25 0 1511 162 77 8 chr20 21097300 21097651 -51056231 - L1MA4A LINE L1 0 6303 5929 8289 163 26 10 chr20 21097821 21100088 -51053794 - L1MA4A LINE L1 -379 5924 3612 234 243 26 79 chr20 21100165 21100354 -51053528 + L1ME4a LINE L1 5943 6121 0 25 51 0 0 chr20 21100804 21100843 -51053039 + AT_rich Low_complexity Low_complexity 1 39 0 2899 76 15 2 chr20 21101839 21102458 -51051424 - L1PA7 LINE L1 -593 5561 4939 4784 59 2 0 chr20 21102458 21103050 -51050832 + L1PA7 LINE L1 5560 6154 0 2481 42 0 0 chr20 21103051 21103334 -51050548 + AluY SINE Alu 17 299 -12 447 311 0 34 chr20 21103596 21103715 -51050167 - MER5B DNA MER1_type -63 115 1 214 317 179 28 chr20 21103729 21103874 -51050008 + MER5A DNA MER1_type 21 187 -2 * 505 198 18 36 chr20 21103777 21103888 -51049994 - MER5A DNA MER1_type -77 112 4 213 271 71 0 chr20 21104863 21104933 -51048949 - MIR SINE MIR -47 215 141 645 221 62 7 chr20 21104978 21105123 -51048759 - MIR SINE MIR -65 197 45 21 36 0 0 chr20 21105471 21105499 -51048383 + AT_rich Low_complexity Low_complexity 1 28 0 882 259 202 26 chr20 21105545 21106081 -51047801 + MLT1G LTR MaLR 1 584 -6 31 0 0 0 chr20 21106671 21106702 -51047180 + AT_rich Low_complexity Low_complexity 1 31 0 447 114 46 23 chr20 21106707 21106882 -51047000 + (TA)n Simple_repeat Simple_repeat 2 180 0 1149 246 34 15 chr20 21107939 21108264 -51045618 - MER87 LTR ERV1 0 541 211 302 339 17 17 chr20 21108417 21108532 -51045350 - MER5B DNA MER1_type -55 123 9 2261 55 0 0 chr20 21109069 21109383 -51044499 - AluY SINE Alu 0 325 12 3680 148 43 3 chr20 21109522 21110229 -51043653 - L1MC1 LINE L1 -375 5958 5225 405 0 0 0 chr20 21110415 21110460 -51043422 + (GGAA)n Simple_repeat Simple_repeat 4 48 0 828 259 149 58 chr20 21110904 21111544 -51042338 + L2 LINE L2 2579 3306 -7 317 310 18 9 chr20 21111659 21111772 -51042110 - MIR3 SINE MIR -32 176 63 320 285 77 0 chr20 21112332 21112462 -51041420 - MIR3 SINE MIR -4 204 65 345 171 34 0 chr20 21112660 21112748 -51041134 + (TA)n Simple_repeat Simple_repeat 2 92 0 225 265 123 31 chr20 21112882 21113044 -51040838 - L1ME LINE L1 -730 5436 5260 282 143 0 0 chr20 21113070 21113119 -51040763 + (TA)n Simple_repeat Simple_repeat 1 49 0 529 305 72 15 chr20 21113120 21113520 -51040362 - L1ME LINE L1 -921 5225 4803 198 239 45 75 chr20 21114782 21114849 -51039033 + MIR3 SINE MIR 15 79 -129 307 234 38 21 chr20 21114949 21115070 -51038812 - MIR SINE MIR -68 140 64 21 0 0 0 chr20 21115420 21115441 -51038441 + AT_rich Low_complexity Low_complexity 1 21 0 472 241 108 24 chr20 21116034 21116200 -51037682 + MER5A DNA MER1_type 9 188 -1 520 320 68 15 chr20 21116765 21116971 -51036911 - MIR SINE MIR -14 248 32 227 217 17 0 chr20 21117149 21117209 -51036673 - MLT1K LTR MaLR -6 582 522 307 299 102 83 chr20 21119905 21120229 -51033653 - L1MC4a LINE L1 -1639 6169 5840 562 188 8 8 chr20 21120235 21120352 -51033530 - L1MC4a LINE L1 -2004 5804 5688 1233 236 94 13 chr20 21120354 21120735 -51033147 + MLT1D LTR MaLR 2 413 -92 345 352 92 28 chr20 21120755 21120874 -51033008 - L1MC4a LINE L1 -798 5348 5238 1977 123 3 10 chr20 21120874 21121167 -51032715 - AluSq SINE Alu -1 312 22 345 352 92 28 chr20 21121167 21121540 -51032342 - L1MC4a LINE L1 -908 5238 4812 396 325 103 81 chr20 21121624 21121790 -51032092 + L1M2 LINE L1 45 206 -6643 366 61 0 0 chr20 21121790 21121839 -51032043 + (TGAG)n Simple_repeat Simple_repeat 2 50 0 396 325 103 81 chr20 21121839 21122020 -51031862 + L1M2 LINE L1 206 400 -6449 15749 210 20 21 chr20 21122836 21123945 -51029937 + L1PA15-16 LINE L1 1668 2776 -4073 207 0 0 0 chr20 21123945 21123968 -51029914 + (CA)n Simple_repeat Simple_repeat 2 24 0 15749 210 20 21 chr20 21123968 21125157 -51028725 + L1PA15-16 LINE L1 2776 3964 -2885 2257 118 0 0 chr20 21125157 21125454 -51028428 + AluSg SINE Alu 1 297 -13 15749 210 20 21 chr20 21125454 21126691 -51027191 + L1PA15-16 LINE L1 3964 5183 -1666 1591 21 0 16 chr20 21126691 21126879 -51027003 + AluYa5 SINE Alu 127 311 0 15749 210 20 21 chr20 21126879 21127753 -51026129 + L1PA15-16 LINE L1 5183 6056 -793 332 232 0 0 chr20 21127753 21127831 -51026051 + AluS SINE Alu 1 62 -238 1112 189 26 0 chr20 21227858 21228048 -50925834 - MER58A DNA MER1_type 0 224 30 1007 196 14 27 chr20 21229995 21230215 -50923667 + L1MC1 LINE L1 6092 6308 -25 1282 35 12 26 chr20 21230230 21230577 -50923305 + (GAAA)n Simple_repeat Simple_repeat 1 341 0 272 304 157 49 chr20 21230971 21230991 -50922891 + MIR SINE MIR 37 53 -209 1588 170 93 61 chr20 21230991 21231368 -50922514 - MLT1B LTR MaLR -1 389 1 272 304 157 49 chr20 21231368 21231551 -50922331 + MIR SINE MIR 53 262 0 360 316 7 33 chr20 21231556 21231708 -50922174 - MIR SINE MIR -113 149 2 537 273 17 6 chr20 21232221 21232397 -50921485 - MER5B DNA MER1_type 0 178 1 1153 171 11 91 chr20 21232419 21232694 -50921188 - MLT1C LTR MaLR -210 257 5 2291 98 10 0 chr20 21233195 21233491 -50920391 + AluSx SINE Alu 1 299 -13 8608 174 25 9 chr20 21233704 21235615 -50918267 + L1PA16 LINE L1 3559 5514 -652 2276 91 0 23 chr20 21235615 21235924 -50917958 + AluSc SINE Alu 1 302 -7 8608 174 25 9 chr20 21235924 21236579 -50917303 + L1PA16 LINE L1 5514 6157 -9 181 275 133 25 chr20 21236896 21237016 -50916866 + L3b LINE CR1 1355 1487 -96 255 234 107 111 chr20 21237016 21237260 -50916622 + L1ME4a LINE L1 5699 5941 -180 234 62 0 0 chr20 21238078 21238110 -50915772 + (CA)n Simple_repeat Simple_repeat 1 32 0 579 278 104 0 chr20 21238118 21238291 -50915591 + LTR16B LTR ERVL 8 198 -266 275 254 0 0 chr20 21238414 21238473 -50915409 + LTR16B LTR ERVL 392 450 -14 227 171 0 143 chr20 21238492 21238597 -50915285 - L1MC4 LINE L1 -1339 6703 6614 381 252 40 60 chr20 21239043 21239194 -50914688 - LTR67 LTR ERVL -1 556 409 2289 106 3 0 chr20 21240047 21240348 -50913534 + AluSp SINE Alu 1 302 -11 896 109 0 43 chr20 21240458 21240596 -50913286 + FLAM_C SINE Alu 1 132 -11 857 264 93 65 chr20 21241763 21242161 -50911721 - MLT1I LTR MaLR 0 409 1 21 36 0 0 chr20 21243271 21243299 -50910583 + AT_rich Low_complexity Low_complexity 1 28 0 702 182 94 68 chr20 21243418 21243610 -50910272 - MER3 DNA MER1_type -3 206 10 691 257 78 80 chr20 21244760 21245208 -50908674 - MLT1H LTR MaLR -4 545 99 635 224 100 0 chr20 21246190 21246360 -50907522 - MIR SINE MIR 0 262 76 1183 22 29 0 chr20 21246444 21246581 -50907301 + L1PA4 LINE L1 6015 6155 0 22 35 0 0 chr20 21246631 21246660 -50907222 + AT_rich Low_complexity Low_complexity 1 29 0 598 233 94 90 chr20 21246757 21246792 -50907090 - MLT1F LTR MaLR 0 555 522 1911 133 130 33 chr20 21246792 21247123 -50906759 - THE1B LTR MaLR 0 364 2 598 233 94 90 chr20 21247123 21247372 -50906510 - MLT1F LTR MaLR -33 522 270 549 211 18 0 chr20 21247372 21247481 -50906401 + MER54A LTR ERVL 1 111 -790 1532 172 52 99 chr20 21247481 21247864 -50906018 - MLT1A1 LTR MaLR 0 365 1 3741 191 18 3 chr20 21247889 21248512 -50905370 - MLT1A1-int LTR MaLR -12 1723 1092 180 0 0 0 chr20 21248538 21248558 -50905324 + (TTAGGG)n Simple_repeat Simple_repeat 4 23 0 47 61 0 0 chr20 21249509 21249591 -50904291 + AT_rich Low_complexity Low_complexity 1 82 0 423 304 120 14 chr20 21249748 21249965 -50903917 - MIR SINE MIR -1 261 22 271 219 0 0 chr20 21250038 21250102 -50903780 - AluJ/monomer SINE Alu 0 302 239 939 121 0 0 chr20 21250108 21250232 -50903650 - FLAM_C SINE Alu -19 124 1 329 356 124 10 chr20 21250681 21250883 -50902999 - MIR SINE MIR -31 231 7 395 352 6 0 chr20 21251804 21251980 -50901902 + (CA)n Simple_repeat Simple_repeat 2 178 0 445 180 94 39 chr20 21254153 21254281 -50899601 - L1ME4a LINE L1 -258 5863 5729 614 306 61 53 chr20 21254337 21254570 -50899312 + L3 LINE CR1 1165 1406 -171 1960 88 0 0 chr20 21254570 21254866 -50899016 + AluY SINE Alu 39 334 0 614 306 61 53 chr20 21254866 21255006 -50898876 + L3 LINE CR1 1406 1543 -34 23 0 0 0 chr20 21255311 21255334 -50898548 + AT_rich Low_complexity Low_complexity 1 23 0 1302 241 12 25 chr20 21255528 21255848 -50898034 - LTR16C LTR ERVL -1 490 175 889 222 69 9 chr20 21256976 21257192 -50896690 - LTR16C LTR ERVL -10 481 253 370 340 127 5 chr20 21257384 21257581 -50896301 + MIR SINE MIR 36 256 -6 952 236 43 111 chr20 21258279 21258838 -50895044 + MLT1H LTR MaLR 29 549 0 259 281 47 0 chr20 21258913 21258977 -50894905 + MER5A DNA MER1_type 72 138 -51 328 240 58 29 chr20 21258980 21259084 -50894798 + MER5A DNA MER1_type 59 165 -24 222 62 0 0 chr20 21259110 21259142 -50894740 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 213 245 142 66 chr20 21259181 21259287 -50894595 + L2 LINE L2 3192 3305 -8 205 317 109 20 chr20 21260428 21260529 -50893353 - L2 LINE L2 -7 3265 3156 1052 92 0 6 chr20 21261011 21261175 -50892707 + (TGGA)n Simple_repeat Simple_repeat 4 166 0 3190 171 81 23 chr20 21262035 21262651 -50891231 + MLT1E1 LTR MaLR 3 654 0 798 291 42 4 chr20 21262863 21263100 -50890782 + MIR SINE MIR 17 262 0 293 323 11 11 chr20 21263097 21263190 -50890692 - MIR SINE MIR -154 108 16 * 352 242 30 30 chr20 21263338 21263470 -50890412 + LTR16A1 LTR ERVL 320 451 -6 182 250 0 0 chr20 21263978 21264018 -50889864 + MIR SINE MIR 100 139 -69 550 296 56 0 chr20 21264673 21264852 -50889030 - MIR SINE MIR -8 254 66 449 302 125 33 chr20 21264879 21265240 -50888642 + L2 LINE L2 2371 2764 -550 401 286 48 42 chr20 21265396 21265585 -50888297 + L2 LINE L2 3122 3311 -2 210 171 0 0 chr20 21266076 21266111 -50887771 + A-rich Low_complexity Low_complexity 1 35 0 1946 117 3 50 chr20 21266740 21267039 -50886843 + AluSp SINE Alu 1 285 -28 1537 206 20 0 chr20 21267086 21267378 -50886504 + AluJo SINE Alu 1 298 -14 1048 203 66 14 chr20 21267438 21267650 -50886232 + MER58A DNA MER1_type 2 224 0 239 385 82 0 chr20 21267723 21267858 -50886024 + MIR3 SINE MIR 52 197 -11 972 302 125 20 chr20 21268071 21268478 -50885404 - LTR16C LTR ERVL 0 491 42 546 214 81 29 chr20 21268530 21268703 -50885179 - Charlie7 DNA MER1_type 0 2612 2431 2416 140 46 96 chr20 21268716 21269237 -50884645 + L1MB3 LINE L1 5686 6180 -3 274 252 78 39 chr20 21269248 21269351 -50884531 - Charlie7 DNA MER1_type -2501 111 5 272 287 37 59 chr20 21269499 21269635 -50884247 + MIR SINE MIR 28 160 -102 2402 193 62 33 chr20 21269691 21270210 -50883672 - MLT1F LTR MaLR 0 542 9 618 288 90 65 chr20 21270220 21270830 -50883052 - L2 LINE L2 -76 3237 2595 505 179 86 14 chr20 21271511 21271651 -50882231 + MER113 DNA MER1_type? 67 216 -305 2053 254 63 29 chr20 21272206 21272852 -50881030 + L1ME2 LINE L1 5497 6164 0 624 273 51 31 chr20 21273397 21273653 -50880229 - L1ME LINE L1 -329 5792 5532 1072 173 14 43 chr20 21274114 21274322 -50879560 + AluJo SINE Alu 101 302 -10 621 85 8 47 chr20 21274329 21274458 -50879424 + (GGAA)n Simple_repeat Simple_repeat 4 127 0 1657 224 114 11 chr20 21274913 21275368 -50878514 - L1ME1 LINE L1 -19 6147 5646 1034 219 52 64 chr20 21275846 21276234 -50877648 - Tigger8 DNA MER2_type -62 604 222 740 189 0 0 chr20 21276455 21276566 -50877316 + FLAM_A SINE Alu 1 111 -31 236 329 29 15 chr20 21276947 21277084 -50876798 - L2 LINE L2 -2557 757 619 424 305 33 12 chr20 21277906 21278084 -50875798 + MIR SINE MIR 17 197 -61 1327 148 5 28 chr20 21279057 21279273 -50874609 - AluJo SINE Alu -16 296 86 2345 90 0 0 chr20 21279925 21280215 -50873667 - AluSg1 SINE Alu -19 290 1 1891 151 33 30 chr20 21280681 21280985 -50872897 + AluJo SINE Alu 1 305 -7 531 214 20 0 chr20 21280989 21281087 -50872795 - MER5A DNA MER1_type -87 102 3 717 181 19 151 chr20 21281127 21281332 -50872550 + MER5B DNA MER1_type 1 178 0 180 135 54 0 chr20 21281452 21281489 -50872393 + L2 LINE L2 3270 3308 -5 885 277 102 11 chr20 21281781 21282135 -50871747 + MER113 DNA MER1_type? 61 446 -75 680 283 45 18 chr20 21282760 21282983 -50870899 + MIR SINE MIR 18 246 -16 1352 283 31 5 chr20 21283174 21283566 -50870316 - L1MC4a LINE L1 -1873 5935 5534 1158 192 121 42 chr20 21283574 21283647 -50870235 - Charlie4a DNA MER1_type -1502 459 393 1950 204 17 0 chr20 21283647 21284004 -50869878 - MLT1A1 LTR MaLR -2 363 1 1158 192 121 42 chr20 21284004 21284311 -50869571 - Charlie4a DNA MER1_type -1568 393 49 22 35 0 0 chr20 21284623 21284652 -50869230 + AT_rich Low_complexity Low_complexity 1 29 0 2013 116 34 17 chr20 21284822 21285116 -50868766 + AluSx SINE Alu 1 299 -13 2448 75 3 13 chr20 21285116 21285424 -50868458 + AluY SINE Alu 6 310 -1 313 211 0 26 chr20 21286570 21286646 -50867236 - MER91A DNA MER1_type -122 74 1 1016 209 47 5 chr20 21287232 21287447 -50866435 - MER58A DNA MER1_type 0 224 1 210 235 62 25 chr20 21287532 21287613 -50866269 - MIR SINE MIR -57 205 122 405 290 121 0 chr20 21291039 21291163 -50862719 + L2 LINE L2 3134 3272 0 227 312 65 40 chr20 21291193 21291392 -50862490 + L1ME3 LINE L1 244 447 -5672 203 302 62 42 chr20 21292612 21292708 -50861174 - MIR SINE MIR -108 154 57 38663 77 19 7 chr20 21293555 21299622 -50854260 + L1PA6 LINE L1 11 6151 -3 420 233 67 83 chr20 21300182 21300375 -50853507 + L1MC5 LINE L1 7740 7929 -32 783 226 59 0 chr20 21300564 21300750 -50853132 - MIR SINE MIR -18 244 48 327 274 88 0 chr20 21303236 21303349 -50850533 + MIR SINE MIR 120 242 -20 294 73 0 0 chr20 21304246 21304287 -50849595 + (A)n Simple_repeat Simple_repeat 1 41 0 277 274 53 9 chr20 21304651 21304764 -50849118 + L1ME3 LINE L1 3990 4107 -2022 433 287 62 3 chr20 21304776 21305065 -50848817 + L1ME3 LINE L1 4386 4691 -1438 223 250 0 0 chr20 21305065 21305117 -50848765 + GA-rich Low_complexity Low_complexity 1 52 0 402 260 117 38 chr20 21305159 21305501 -50848381 + L1ME3 LINE L1 4708 5076 -1053 2649 165 43 10 chr20 21305511 21305997 -50847885 - MER4E LTR ERV1 -28 748 252 514 267 83 27 chr20 21306004 21306710 -50847172 + L1ME3 LINE L1 5069 5871 -282 2389 82 0 0 chr20 21306936 21307229 -50846653 - AluSg SINE Alu -17 293 1 1863 140 46 7 chr20 21307229 21307514 -50846368 - AluSx SINE Alu -16 296 1 24 67 0 0 chr20 21307625 21307670 -50846212 + AT_rich Low_complexity Low_complexity 1 45 0 917 256 114 48 chr20 21308025 21308446 -50845436 - MLT1J2 LTR MaLR 0 450 2 2091 115 55 30 chr20 21308506 21308870 -50845012 + THE1C LTR MaLR 1 373 -2 1594 208 51 58 chr20 21308935 21309402 -50844480 - MLT2C2 LTR ERVL 0 464 1 664 227 148 10 chr20 21309446 21309649 -50844233 + MIR SINE MIR 11 241 -21 1033 235 113 88 chr20 21310019 21310427 -50843455 - MLT1H LTR MaLR -17 532 115 1979 131 7 3 chr20 21311169 21311466 -50842416 + AluJb SINE Alu 15 312 0 816 219 91 30 chr20 21312127 21312392 -50841490 - L1ME3A LINE L1 -1 6169 5889 216 86 0 0 chr20 21312661 21312696 -50841186 + (CAGAGA)n Simple_repeat Simple_repeat 2 36 0 839 257 130 17 chr20 21313478 21313840 -50840042 - LTR16C LTR ERVL 0 491 89 634 185 9 21 chr20 21316224 21316715 -50837167 + CT-rich Low_complexity Low_complexity 1 485 0 22 35 0 0 chr20 21317344 21317373 -50836509 + AT_rich Low_complexity Low_complexity 1 29 0 268 349 24 48 chr20 21317663 21317872 -50836010 - L2 LINE L2 -4 3309 3106 423 299 206 16 chr20 21319412 21319796 -50834086 - LTR16B LTR ERVL 0 464 8 671 235 24 0 chr20 21320113 21320279 -50833603 - MLT1G LTR MaLR 0 590 421 22 0 0 0 chr20 21320655 21320677 -50833205 + AT_rich Low_complexity Low_complexity 1 22 0 1187 252 77 19 chr20 21321030 21321447 -50832435 + LTR16A1 LTR ERVL 4 444 -13 1796 152 50 0 chr20 21321573 21321856 -50832026 - AluJb SINE Alu -15 297 1 293 200 14 14 chr20 21322116 21322186 -50831696 - LTR37B LTR ERV1 -258 210 141 246 330 0 0 chr20 21322213 21322301 -50831581 + MER58A DNA MER1_type 1 88 -19 225 325 111 17 chr20 21322497 21322614 -50831268 + MIR SINE MIR 16 143 -65 2232 118 0 3 chr20 21323018 21323314 -50830568 + AluSq SINE Alu 6 300 -13 2145 124 71 42 chr20 21323910 21324264 -50829618 - THE1B LTR MaLR 0 364 1 1889 121 17 75 chr20 21324274 21324621 -50829261 + MLT1C LTR MaLR 1 327 -140 384 162 15 0 chr20 21324728 21324796 -50829086 + MLT1C LTR MaLR 372 440 -27 391 231 179 17 chr20 21325147 21325264 -50828618 - MER63 DNA MER1_type -299 763 2 1104 260 94 44 chr20 21327024 21327458 -50826424 - LTR16C LTR ERVL 0 491 36 629 176 9 9 chr20 21328359 21328467 -50825415 - MER81 DNA DNA -4 110 3 345 328 99 0 chr20 21328874 21329005 -50824877 - MLT1I LTR MaLR -265 144 1 1881 139 0 72 chr20 21329405 21329737 -50824145 + AluSx SINE Alu 1 308 -4 399 266 106 66 chr20 21329784 21330495 -50823387 + L1ME4a LINE L1 5350 6099 -22 659 213 94 25 chr20 21330973 21331175 -50822707 - MER20 DNA MER1_type 0 219 4 1240 142 111 66 chr20 21331328 21331616 -50822266 - AluJo SINE Alu -1 301 1 276 235 211 24 chr20 21331734 21331900 -50821982 + LTR33A LTR ERVL 327 523 0 345 125 0 0 chr20 21331923 21331979 -50821903 + (TA)n Simple_repeat Simple_repeat 1 56 0 * 353 217 0 0 chr20 21331924 21331979 -50821903 + L1MC4 LINE L1 6636 6693 -1349 2110 89 14 0 chr20 21331979 21332260 -50821622 - AluSp SINE Alu -27 286 2 353 217 0 0 chr20 21332260 21332273 -50821609 + L1MC4 LINE L1 6692 6704 -1338 2478 42 7 3 chr20 21332452 21332762 -50821120 - AluY SINE Alu 0 311 1 327 283 40 0 chr20 21332805 21332904 -50820978 + MIR SINE MIR 159 261 -1 1172 186 3 114 chr20 21333040 21333346 -50820536 - MLT1A1 LTR MaLR -93 272 1 1413 246 120 39 chr20 21333679 21334187 -50819695 - MLT1H LTR MaLR 0 549 1 1807 99 148 0 chr20 21334350 21334613 -50819269 - AluSx SINE Alu -10 302 1 202 239 18 37 chr20 21335553 21335662 -50818220 + (TA)n Simple_repeat Simple_repeat 2 108 0 1976 117 27 3 chr20 21338398 21338696 -50815186 + AluSx SINE Alu 1 305 -7 189 300 0 33 chr20 21339836 21339896 -50813986 - MIR3 SINE MIR -23 185 128 961 258 118 7 chr20 21340646 21340973 -50812909 - LTR16A1 LTR ERVL -19 469 100 271 299 88 36 chr20 21341321 21341458 -50812424 + L3 LINE CR1 1223 1366 -211 408 184 101 9 chr20 21341545 21341654 -50812228 - L1ME3A LINE L1 -5 6165 6047 1778 246 86 0 chr20 21341686 21342117 -50811765 - L1ME3A LINE L1 -311 5859 5392 212 329 22 58 chr20 21342117 21342254 -50811628 - MER5A DNA MER1_type -33 156 25 560 199 146 82 chr20 21342371 21342638 -50811244 - MLT1J LTR MaLR -4 507 224 186 43 0 0 chr20 21342641 21342664 -50811218 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 231 114 0 0 chr20 21342664 21342699 -50811183 + (GA)n Simple_repeat Simple_repeat 2 36 0 523 262 39 52 chr20 21342710 21342943 -50810939 - MLT1J LTR MaLR -260 251 22 192 253 120 13 chr20 21342975 21343050 -50810832 + MIR3 SINE MIR 93 175 -33 467 271 80 20 chr20 21343281 21343432 -50810450 - MIR SINE MIR -26 236 77 344 269 50 25 chr20 21343795 21343914 -50809968 - MIR3 SINE MIR -5 203 82 1060 60 0 0 chr20 21344247 21344380 -50809502 + L1MA3 LINE L1 6173 6305 0 254 275 69 46 chr20 21344455 21344586 -50809296 - MER5A DNA MER1_type -6 183 50 * 274 272 35 26 chr20 21344473 21344587 -50809295 + MER5B DNA MER1_type 26 140 -38 463 156 100 0 chr20 21344674 21344764 -50809118 + MER5B DNA MER1_type 80 178 0 256 323 194 7 chr20 21344779 21344934 -50808948 - MER5A DNA MER1_type -5 184 1 215 317 154 0 chr20 21345023 21345127 -50808755 + L2 LINE L2 3136 3255 -17 28 0 0 0 chr20 21345276 21345304 -50808578 + AT_rich Low_complexity Low_complexity 1 28 0 1439 46 14 60 chr20 21345943 21346160 -50807722 - L1PA5 LINE L1 -1 6153 5947 486 247 72 6 chr20 21346339 21346505 -50807377 + MER112 DNA MER1_type 5 181 -79 724 210 19 25 chr20 21346526 21346688 -50807194 - MER5B DNA MER1_type 0 178 18 202 333 143 24 chr20 21346812 21346896 -50806986 - L2 LINE L2 -19 3253 3160 2095 230 77 13 chr20 21346906 21347515 -50806367 - L1ME3A LINE L1 -72 6098 5451 1779 153 4 4 chr20 21348098 21348403 -50805479 - AluJo SINE Alu 0 305 1 211 135 162 0 chr20 21348441 21348478 -50805404 + MER91B DNA MER1_type 22 64 -126 942 259 67 7 chr20 21348549 21348892 -50804990 - L1ME3A LINE L1 -76 6094 5734 183 314 0 0 chr20 21349035 21349086 -50804796 + MIR SINE MIR 103 153 -109 964 267 113 3 chr20 21349099 21349410 -50804472 - L1ME2 LINE L1 -9 6155 5811 1474 250 64 15 chr20 21349665 21350137 -50803745 - Charlie4a DNA MER1_type -6 502 8 240 262 196 0 chr20 21350149 21350256 -50803626 + MIR SINE MIR 124 251 -11 433 290 101 42 chr20 21351856 21352073 -50801809 - MIR SINE MIR -21 241 12 282 307 66 25 chr20 21352162 21352293 -50801589 - MIR SINE MIR -69 139 7 836 180 99 6 chr20 21352629 21352801 -50801081 + MER3 DNA MER1_type 18 205 -4 223 320 160 0 chr20 21353662 21353762 -50800120 - MIR3 SINE MIR -14 194 79 450 260 10 0 chr20 21353857 21353957 -50799925 + L2 LINE L2 3211 3311 -2 2156 100 0 0 chr20 21355004 21355293 -50798589 - AluSx SINE Alu -15 297 9 2200 92 3 0 chr20 21355522 21355825 -50798057 - AluSg SINE Alu -6 304 1 238 209 0 81 chr20 21356037 21356123 -50797759 - L1ME4a LINE L1 0 6121 6043 470 212 281 37 chr20 21356535 21356752 -50797130 + LTR16A1 LTR ERVL 4 273 -184 758 228 66 22 chr20 21357416 21357807 -50796075 - LTR16A1 LTR ERVL 0 457 3 860 220 0 41 chr20 21358742 21358960 -50794922 - MER3 DNA MER1_type 0 209 1 192 218 26 13 chr20 21358976 21359054 -50794828 + (TA)n Simple_repeat Simple_repeat 1 79 0 225 0 0 0 chr20 21359746 21359771 -50794111 + (TTTTA)n Simple_repeat Simple_repeat 3 27 0 21 0 0 0 chr20 21359801 21359822 -50794060 + AT_rich Low_complexity Low_complexity 1 21 0 180 291 13 63 chr20 21360740 21360819 -50793063 + L2 LINE L2 3198 3272 0 2440 55 7 0 chr20 21361952 21362259 -50791623 + AluY SINE Alu 1 309 -2 255 341 16 47 chr20 21362270 21362399 -50791483 - MIR SINE MIR -135 127 3 2521 55 0 0 chr20 21362614 21362923 -50790959 - AluY SINE Alu -2 309 1 857 244 16 5 chr20 21363018 21363211 -50790671 - LTR16C LTR ERVL 0 491 297 253 227 99 116 chr20 21363455 21363533 -50790349 - MIR3 SINE MIR -23 185 107 2200 112 0 3 chr20 21363533 21363846 -50790036 + AluSx SINE Alu 1 312 0 253 227 99 116 chr20 21363846 21363939 -50789943 - MIR3 SINE MIR -101 107 17 198 0 0 0 chr20 21364777 21364799 -50789083 + (A)n Simple_repeat Simple_repeat 1 22 0 231 195 49 37 chr20 21366313 21366395 -50787487 + L1MC4 LINE L1 6616 6698 -1344 807 214 37 81 chr20 21367169 21367288 -50786594 - MER112 DNA MER1_type 0 260 137 396 59 0 0 chr20 21367288 21367339 -50786543 + (AATAG)n Simple_repeat Simple_repeat 2 52 0 807 214 37 81 chr20 21367339 21367490 -50786392 - MER112 DNA MER1_type -123 137 2 600 249 154 71 chr20 21367499 21367899 -50785983 - MLT1J2 LTR MaLR 0 450 1 27 87 0 0 chr20 21368041 21368110 -50785772 + AT_rich Low_complexity Low_complexity 1 69 0 979 155 6 0 chr20 21368150 21368311 -50785571 + AluJb SINE Alu 134 295 -17 1895 113 19 44 chr20 21370222 21370257 -50783625 - AluSx SINE Alu -2 310 276 222 37 0 0 chr20 21370257 21370284 -50783598 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1895 113 19 44 chr20 21370284 21370566 -50783316 - AluSx SINE Alu -36 276 1 853 217 136 5 chr20 21370726 21370924 -50782958 + MER58A DNA MER1_type 1 224 0 516 320 35 35 chr20 21371024 21371283 -50782599 + LTR16C LTR ERVL 140 398 -93 420 156 125 16 chr20 21371280 21371408 -50782474 - LTR50 LTR ERVL -14 781 640 * 1143 192 225 15 chr20 21371875 21372106 -50781776 - LTR50 LTR ERVL -166 629 448 2278 150 8 3 chr20 21372106 21372467 -50781415 - MLT1A1 LTR MaLR 0 365 3 1143 192 225 15 chr20 21372467 21372680 -50781202 - LTR50 LTR ERVL -347 448 10 276 162 40 27 chr20 21372683 21372757 -50781125 + LTR16C LTR ERVL 408 482 -9 1023 282 52 24 chr20 21373236 21373619 -50780263 - LTR16C LTR ERVL 0 491 98 798 299 76 24 chr20 21374225 21374683 -50779199 + L2 LINE L2 2832 3313 0 251 273 0 0 chr20 21375476 21375531 -50778351 + L2 LINE L2 3217 3271 -1 1002 253 94 14 chr20 21375657 21376060 -50777822 + LTR16C LTR ERVL 2 489 -2 529 256 85 0 chr20 21378460 21378624 -50775258 - MER45A DNA AcHobo 0 178 1 200 217 0 0 chr20 21379750 21379796 -50774086 + T-rich Low_complexity Low_complexity 1 46 0 226 208 0 0 chr20 21379868 21379916 -50773966 - L1MC4 LINE L1 -1340 6702 6655 277 281 0 0 chr20 21379927 21380016 -50773866 - L1MC4 LINE L1 -1339 6703 6615 230 152 0 0 chr20 21380045 21380091 -50773791 - LTR66 LTR ERVL -171 439 394 291 191 0 0 chr20 21380091 21380154 -50773728 + (TA)n Simple_repeat Simple_repeat 2 64 0 444 256 45 0 chr20 21380166 21380299 -50773583 + L1MC4 LINE L1 7904 8042 0 600 243 135 46 chr20 21380994 21381253 -50772629 + L2 LINE L2 3032 3313 0 1537 172 16 23 chr20 21381704 21382007 -50771875 - AluJb SINE Alu -11 301 1 2062 111 3 0 chr20 21382110 21382399 -50771483 + AluSx SINE Alu 11 300 -12 2209 197 18 16 chr20 21382787 21383223 -50770659 + Tigger3(Golem) DNA MER2_type 1 437 -2592 250 171 29 14 chr20 21383212 21383282 -50770600 + Tigger3(Golem) DNA MER2_type 2451 2521 -508 * 437 184 51 0 chr20 21383440 21383538 -50770344 - MER5A DNA MER1_type -78 111 9 1874 92 35 0 chr20 21383743 21384003 -50769879 + AluSx SINE Alu 1 269 -43 323 78 39 0 chr20 21384023 21384074 -50769808 + AluSx SINE Alu 246 298 -4 1701 231 117 10 chr20 21384639 21385162 -50768720 + L1MC4a LINE L1 7229 7807 -1 1456 171 10 45 chr20 21385493 21385785 -50768097 - AluJb SINE Alu -25 287 6 510 213 199 0 chr20 21385956 21386097 -50767785 - MIR SINE MIR -45 217 49 209 157 78 20 chr20 21387225 21387276 -50766606 + L2 LINE L2 3121 3174 -98 266 0 29 0 chr20 21387365 21387399 -50766483 + (TTTTTG)n Simple_repeat Simple_repeat 3 37 0 498 230 86 0 chr20 21387717 21387891 -50765991 - MER5A DNA MER1_type 0 189 1 461 217 51 14 chr20 21388197 21388335 -50765547 + MER5A DNA MER1_type 3 145 -44 836 236 123 44 chr20 21388343 21388817 -50765065 + MLT1E2 LTR MaLR 7 552 -73 533 198 102 23 chr20 21388890 21388982 -50764900 + Charlie4 DNA MER1_type 1738 1821 -140 1834 165 0 3 chr20 21388982 21389285 -50764597 - AluJb SINE Alu -10 302 1 533 198 102 23 chr20 21389285 21389369 -50764513 + Charlie4 DNA MER1_type 1821 1928 -33 409 220 39 136 chr20 21389654 21389733 -50764149 + MER112 DNA MER1_type 1 86 -174 306 0 0 0 chr20 21389733 21389767 -50764115 + (TG)n Simple_repeat Simple_repeat 2 35 0 409 220 39 136 chr20 21389767 21389973 -50763909 + MER112 DNA MER1_type 86 258 -2 282 150 24 47 chr20 21390010 21390137 -50763745 + (CA)n Simple_repeat Simple_repeat 1 124 0 238 259 0 0 chr20 21391152 21391206 -50762676 - MER81 DNA DNA -58 56 3 1371 201 34 60 chr20 21391529 21391913 -50761969 + MLT1A2 LTR MaLR 1 374 0 305 377 22 0 chr20 21391987 21392125 -50761757 + MIR3 SINE MIR 30 170 -38 306 284 205 0 chr20 21392585 21392712 -50761170 - MER5A DNA MER1_type 0 189 37 188 303 165 37 chr20 21393173 21393282 -50760600 - MER5B DNA MER1_type -53 125 3 795 191 0 0 chr20 21393440 21393571 -50760311 - FLAM_A SINE Alu -2 131 1 1073 218 79 21 chr20 21393887 21394167 -50759715 + L1ME LINE L1 5301 5596 -570 1689 178 0 10 chr20 21394897 21395189 -50758693 + AluJo SINE Alu 3 291 -21 329 244 154 41 chr20 21395237 21395360 -50758522 + MIR SINE MIR 13 149 -113 650 278 104 50 chr20 21395377 21395780 -50758102 + LTR16A1 LTR ERVL 30 454 -3 255 61 0 0 chr20 21395846 21395879 -50758003 + (CAT)n Simple_repeat Simple_repeat 2 34 0 1526 204 103 24 chr20 21396133 21396588 -50757294 - LTR16C LTR ERVL 0 491 1 235 288 45 0 chr20 21396626 21396692 -50757190 - MIR SINE MIR -115 147 79 195 259 165 42 chr20 21396730 21396942 -50756940 + L3 LINE CR1 1166 1403 -174 182 146 49 24 chr20 21397348 21397389 -50756493 + MER5A DNA MER1_type 34 75 -114 * 255 143 41 0 chr20 21397386 21397435 -50756447 - MER5A DNA MER1_type -84 105 55 1132 162 0 68 chr20 21397469 21397703 -50756179 + MER20 DNA MER1_type 2 219 0 2148 100 7 0 chr20 21398507 21398796 -50755086 + AluSp SINE Alu 1 291 -22 21 36 0 0 chr20 21398796 21398824 -50755058 + AT_rich Low_complexity Low_complexity 1 28 0 193 28 0 56 chr20 21399795 21399831 -50754051 + (CAAA)n Simple_repeat Simple_repeat 3 36 0 1456 98 0 0 chr20 21399851 21400044 -50753838 - AluSx SINE Alu -119 193 1 1608 153 18 11 chr20 21400044 21400326 -50753556 - MER33 DNA MER1_type -40 284 1 245 198 198 12 chr20 21401256 21401337 -50752545 - MLT1K LTR MaLR -348 240 145 716 171 55 111 chr20 21402537 21402736 -50751146 + MER5A DNA MER1_type 1 188 -1 205 255 13 67 chr20 21403075 21403224 -50750658 + CT-rich Low_complexity Low_complexity 1 141 0 714 253 77 9 chr20 21404141 21404374 -50749508 - LTR16C LTR ERVL -8 483 235 250 407 28 7 chr20 21404652 21404797 -50749085 + MIR3 SINE MIR 23 170 -38 311 288 50 22 chr20 21404876 21405015 -50748867 + MER113 DNA MER1_type? 22 164 -357 437 227 15 76 chr20 21405207 21405339 -50748543 - MIR SINE MIR -58 204 81 227 301 81 58 chr20 21406345 21406518 -50747364 + MER117 DNA MER1_type 2 178 -19 290 253 33 11 chr20 21407812 21407903 -50745979 - MIR SINE MIR -54 208 116 496 244 24 0 chr20 21407980 21408103 -50745779 + LTR16C LTR ERVL 149 274 -217 818 221 31 78 chr20 21408174 21408432 -50745450 + MLT1J LTR MaLR 17 262 -249 23 0 0 0 chr20 21408599 21408622 -50745260 + GC_rich Low_complexity Low_complexity 1 23 0 3852 148 29 24 chr20 21408622 21409345 -50744537 - L1MB3 LINE L1 -12 6171 5445 2353 66 0 3 chr20 21409908 21410209 -50743673 + AluY SINE Alu 3 302 -9 21 36 0 0 chr20 21410699 21410727 -50743155 + AT_rich Low_complexity Low_complexity 1 28 0 203 292 208 31 chr20 21411398 21411494 -50742388 + MER5A DNA MER1_type 51 163 -26 261 0 0 0 chr20 21411523 21411552 -50742330 + (TG)n Simple_repeat Simple_repeat 1 29 0 2052 102 0 11 chr20 21411552 21411836 -50742046 - AluSx SINE Alu -31 281 1 226 273 172 0 chr20 21411860 21411959 -50741923 - L1MC4a LINE L1 -1688 6120 6005 234 81 0 0 chr20 21411969 21412006 -50741876 + (TG)n Simple_repeat Simple_repeat 2 38 0 449 248 131 0 chr20 21412079 21412232 -50741650 - L1MC4a LINE L1 -1986 5822 5650 253 349 28 0 chr20 21412304 21412410 -50741472 - L1MC4a LINE L1 -2126 5682 5574 700 172 179 0 chr20 21412522 21412656 -50741226 - MER5A DNA MER1_type -28 161 4 324 272 9 29 chr20 21412738 21412848 -50741034 + MIR SINE MIR 46 152 -67 1496 186 38 22 chr20 21412868 21413185 -50740697 + L1ME2 LINE L1 5841 6162 -2 24 0 0 0 chr20 21413799 21413823 -50740059 + GC_rich Low_complexity Low_complexity 1 24 0 2263 68 27 0 chr20 21414601 21414895 -50738987 + AluSx SINE Alu 11 312 0 24 67 0 0 chr20 21414915 21414960 -50738922 + AT_rich Low_complexity Low_complexity 1 45 0 442 113 0 0 chr20 21414960 21415022 -50738860 - FLAM_A SINE Alu -27 115 54 27 0 0 0 chr20 21415126 21415153 -50738729 + AT_rich Low_complexity Low_complexity 1 27 0 692 161 7 54 chr20 21415530 21415679 -50738203 + FLAM_C SINE Alu 2 143 0 369 199 11 24 chr20 21416035 21416125 -50737757 - MLT1I LTR MaLR -265 144 72 327 214 67 22 chr20 21416468 21416557 -50737325 - MLT1I LTR MaLR -315 94 2 182 317 17 0 chr20 21416793 21416853 -50737029 + MIR SINE MIR 90 150 -112 410 298 44 0 chr20 21416865 21416979 -50736903 - MER94 DNA DNA 0 134 16 1328 217 46 108 chr20 21417009 21417198 -50736684 + L1MC4 LINE L1 7473 7672 -370 2037 121 3 7 chr20 21417198 21417504 -50736378 + AluSx SINE Alu 1 305 -7 1328 217 46 108 chr20 21417504 21417709 -50736173 + L1MC4 LINE L1 7672 7820 -222 2052 116 0 7 chr20 21417709 21418003 -50735879 + AluSc SINE Alu 1 292 -17 1328 217 46 108 chr20 21418003 21418210 -50735672 + L1MC4 LINE L1 7820 8038 -4 197 81 0 27 chr20 21418382 21418419 -50735463 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 676 188 0 8 chr20 21418420 21418537 -50735345 - FLAM_C SINE Alu -26 117 2 1592 167 67 0 chr20 21418729 21419011 -50734871 + AluJb SINE Alu 1 301 -11 253 266 255 0 chr20 21419253 21419347 -50734535 + MIR3 SINE MIR 66 183 -25 620 190 132 0 chr20 21419347 21419468 -50734414 + MLT1B LTR MaLR 1 137 -253 315 87 22 0 chr20 21419464 21419510 -50734372 + MLT1B LTR MaLR 344 390 0 * 243 258 32 0 chr20 21420043 21420105 -50733777 + MER90 LTR ERV1 512 575 0 508 228 32 150 chr20 21420105 21420296 -50733586 + L1MC4 LINE L1 7625 7728 -314 1893 160 0 10 chr20 21420296 21420608 -50733274 + AluJb SINE Alu 1 309 -3 508 228 32 150 chr20 21420608 21420890 -50732992 + L1MC4 LINE L1 7728 8042 0 1573 187 13 7 chr20 21421566 21421876 -50732006 - AluJo SINE Alu 0 312 1 1459 162 0 63 chr20 21421958 21422260 -50731622 + AluJb SINE Alu 30 312 0 465 240 0 62 chr20 21423090 21423236 -50730646 + LTR33 LTR ERVL 24 160 -361 365 233 0 44 chr20 21423293 21423383 -50730499 + LTR33 LTR ERVL 329 414 -107 1019 180 0 0 chr20 21423505 21423672 -50730210 + FAM SINE Alu 1 167 -8 562 256 43 72 chr20 21424586 21424768 -50729114 - MER63A DNA MER1_type -1478 210 33 1621 188 0 20 chr20 21424768 21425072 -50728810 + AluJo SINE Alu 1 298 -14 562 256 43 72 chr20 21425072 21425096 -50728786 - MER63A DNA MER1_type -1655 33 10 21 0 0 0 chr20 21425312 21425333 -50728549 + AT_rich Low_complexity Low_complexity 1 21 0 186 243 291 10 chr20 21425715 21425818 -50728064 + L3 LINE CR1 21 152 -1425 482 317 170 13 chr20 21426220 21426444 -50727438 + MIR SINE MIR 4 262 0 1292 221 37 3 chr20 21426478 21426776 -50727106 - LTR16C LTR ERVL -1 490 183 2779 128 58 5 chr20 21427497 21427927 -50725955 - LTR35 LTR ERV1 -2 616 164 404 184 26 26 chr20 21427934 21427986 -50725896 + AluJ/FLAM SINE Alu 1 52 -250 3454 165 2 4 chr20 21427986 21428530 -50725352 + MER41D LTR ERV1 1 543 -14 1057 207 25 42 chr20 21428530 21428767 -50725115 - THE1C LTR MaLR 0 375 143 365 278 0 0 chr20 21478903 21478993 -50674889 - L1MC4 LINE L1 -1339 6703 6614 232 254 35 26 chr20 21479130 21479244 -50674638 + L1M4 LINE L1 3343 3457 -2689 307 315 44 10 chr20 21479444 21479647 -50674235 + L1M4 LINE L1 3672 3881 -2265 490 347 80 19 chr20 21479660 21480086 -50673796 + L1M4 LINE L1 3923 4374 -1772 1919 138 47 7 chr20 21480139 21480437 -50673445 + AluJo SINE Alu 1 310 -2 2119 138 0 0 chr20 21480493 21480804 -50673078 + AluSx SINE Alu 1 311 -1 468 239 97 61 chr20 21480817 21481293 -50672589 + L1M4 LINE L1 4507 4999 -1147 1901 148 19 13 chr20 21481343 21481653 -50672229 + AluJo SINE Alu 1 312 0 188 57 0 57 chr20 21481671 21481706 -50672176 + (TCTA)n Simple_repeat Simple_repeat 3 35 0 28 0 0 0 chr20 21481865 21481893 -50671989 + AT_rich Low_complexity Low_complexity 1 28 0 228 35 0 0 chr20 21484359 21484388 -50669494 + (CAA)n Simple_repeat Simple_repeat 2 30 0 295 288 101 36 chr20 21484546 21484685 -50669197 - MIR3 SINE MIR -21 187 40 2018 106 82 64 chr20 21484686 21485016 -50668866 + MER1B DNA MER1_type 1 336 -1 203 289 13 53 chr20 21485614 21485690 -50668192 + L2 LINE L2 3180 3252 -20 2157 119 0 3 chr20 21486339 21486641 -50667241 + AluY SINE Alu 1 301 -10 2203 109 0 10 chr20 21487038 21487340 -50666542 - AluSg SINE Alu -9 301 3 2380 74 7 10 chr20 21487368 21487678 -50666204 + AluSg SINE Alu 1 309 -1 820 209 79 23 chr20 21488249 21488426 -50665456 + MLT1J LTR MaLR 1 187 -324 356 123 0 15 chr20 21488470 21488535 -50665347 + (TCCC)n Simple_repeat Simple_repeat 4 67 0 1411 108 46 0 chr20 21488558 21488753 -50665129 - AluSx SINE Alu -98 214 11 1238 164 0 23 chr20 21488811 21489030 -50664852 + AluJo SINE Alu 90 303 -9 1674 163 51 10 chr20 21489173 21489290 -50664592 + AluJb SINE Alu 1 112 -200 285 89 0 0 chr20 21489290 21489335 -50664547 + (CA)n Simple_repeat Simple_repeat 2 46 0 1674 163 51 10 chr20 21489335 21489511 -50664371 + AluJb SINE Alu 112 306 -6 2265 116 0 0 chr20 21489708 21490010 -50663872 - AluSx SINE Alu -9 303 2 254 87 348 0 chr20 21490011 21490057 -50663825 - L1ME2 LINE L1 -34 6130 6069 728 88 0 0 chr20 21490057 21490148 -50663734 - AluSg/x SINE Alu -15 294 204 417 245 31 50 chr20 21490148 21490307 -50663575 - L1ME2 LINE L1 -82 6082 5927 638 282 97 26 chr20 21490359 21490710 -50663172 + L1ME4a LINE L1 5531 5906 -215 2433 92 0 0 chr20 21490958 21491263 -50662619 + AluSx SINE Alu 1 305 -7 2158 149 24 35 chr20 21491569 21491786 -50662096 - MLT1A1 LTR MaLR 0 365 152 2186 108 0 0 chr20 21491786 21492074 -50661808 - AluSg1 SINE Alu -21 288 1 2158 149 24 35 chr20 21492074 21492225 -50661657 - MLT1A1 LTR MaLR -213 152 1 244 245 75 0 chr20 21492401 21492454 -50661428 - L2 LINE L2 -1 3312 3256 204 344 0 0 chr20 21492636 21492697 -50661185 + MER5A DNA MER1_type 122 182 -7 2329 83 3 7 chr20 21492700 21493000 -50660882 + AluSp SINE Alu 1 299 -14 721 230 67 0 chr20 21493605 21493770 -50660112 + MER5A DNA MER1_type 14 189 0 361 243 16 65 chr20 21494576 21494761 -50659121 + CT-rich Low_complexity Low_complexity 3 178 0 * 462 272 0 43 chr20 21494623 21494807 -50659075 + C-rich Low_complexity Low_complexity 5 180 0 21 71 0 0 chr20 21496653 21496695 -50657187 + AT_rich Low_complexity Low_complexity 1 42 0 182 261 23 68 chr20 21497782 21497870 -50656012 - MIR SINE MIR -83 179 96 394 191 0 0 chr20 21498085 21498153 -50655729 - MER92C LTR ERV1 -2 552 485 * 627 216 36 22 chr20 21498141 21498280 -50655602 - MER92B LTR ERV1 -486 150 10 380 242 135 55 chr20 21498475 21498915 -50654967 - L1ME2 LINE L1 -328 5842 5366 21 0 0 0 chr20 21499018 21499039 -50654843 + AT_rich Low_complexity Low_complexity 1 21 0 1566 199 3 14 chr20 21499040 21499337 -50654545 + AluJo SINE Alu 1 294 -18 341 135 40 27 chr20 21499627 21499701 -50654181 + L1MC2 LINE L1 6256 6330 -14 1400 77 0 0 chr20 21499701 21499870 -50654012 + AluSg/x SINE Alu 134 302 -8 1485 166 119 11 chr20 21499917 21500262 -50653620 - AluJo SINE Alu 0 380 6 904 172 11 28 chr20 21500587 21500767 -50653115 - AluJb SINE Alu -14 298 122 27 0 0 0 chr20 21500793 21500820 -50653062 + AT_rich Low_complexity Low_complexity 1 27 0 928 106 0 8 chr20 21500827 21500950 -50652932 - AluJb SINE Alu -190 122 1 421 164 0 0 chr20 21501402 21501469 -50652413 - 7SK RNA RNA -6 187 121 824 118 0 16 chr20 21501505 21501632 -50652250 - 7SK RNA RNA -68 125 1 1784 136 139 0 chr20 21502039 21502356 -50651526 + MER46B DNA MER2_type 1 236 0 1538 106 10 0 chr20 21502493 21502701 -50651181 + AluSp SINE Alu 86 295 -18 274 237 0 0 chr20 21502746 21502805 -50651077 - Charlie5 DNA MER1_type -27 2585 2527 1072 134 93 0 chr20 21502843 21503037 -50650845 - Charlie5 DNA MER1_type -152 2460 2249 665 126 54 9 chr20 21503052 21503163 -50650719 - Charlie5 DNA MER1_type -2489 123 8 2176 116 3 3 chr20 21503801 21504104 -50649778 + AluSp SINE Alu 1 303 -10 628 221 80 80 chr20 21504215 21504415 -50649467 + MIR SINE MIR 18 220 -42 1595 176 0 40 chr20 21504415 21504716 -50649166 + AluJo SINE Alu 1 289 -23 628 221 80 80 chr20 21504716 21504741 -50649141 + MIR SINE MIR 219 243 -19 897 281 117 69 chr20 21505404 21505588 -50648294 - L2 LINE L2 -2 3311 3137 2404 77 3 3 chr20 21505588 21505886 -50647996 + AluSq SINE Alu 1 298 -15 897 281 117 69 chr20 21505886 21506321 -50647561 - L2 LINE L2 -176 3137 2622 1638 179 7 14 chr20 21506321 21506617 -50647265 + AluJo SINE Alu 1 294 -18 897 281 117 69 chr20 21506617 21506838 -50647044 - L2 LINE L2 -691 2622 2413 483 260 46 73 chr20 21507086 21507200 -50646682 - L2 LINE L2 -2 3311 3204 2207 100 3 10 chr20 21507200 21507501 -50646381 - AluSg SINE Alu -11 299 1 483 260 46 73 chr20 21507501 21507605 -50646277 - L2 LINE L2 -109 3204 3099 4568 172 42 34 chr20 21507693 21508854 -50645028 + L1MB7 LINE L1 4860 6022 -162 1802 176 16 10 chr20 21508854 21509161 -50644721 - AluJb SINE Alu -3 309 1 4568 172 42 34 chr20 21509161 21509303 -50644579 + L1MB7 LINE L1 6022 6161 -23 2499 60 0 7 chr20 21509491 21509791 -50644091 + AluSp SINE Alu 2 299 -14 439 314 19 19 chr20 21509906 21510116 -50643766 - L1ME4a LINE L1 -196 5925 5716 471 180 0 81 chr20 21510119 21510230 -50643652 - L1ME4a LINE L1 -457 5664 5563 796 182 198 88 chr20 21510682 21511045 -50642837 - L1ME1 LINE L1 -79 6087 5790 180 97 0 0 chr20 21511064 21511095 -50642787 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 303 191 53 96 chr20 21511102 21511196 -50642686 - LTR9B LTR ERV1 -89 555 466 654 133 275 0 chr20 21511333 21511453 -50642429 + Tigger1 DNA MER2_type 2266 2418 0 348 240 20 20 chr20 21511940 21512040 -50641842 - MIR SINE MIR -91 171 72 23 0 0 0 chr20 21512322 21512345 -50641537 + AT_rich Low_complexity Low_complexity 1 23 0 998 145 26 0 chr20 21512400 21512552 -50641330 - AluJb SINE Alu -23 289 134 473 252 43 0 chr20 21512982 21513097 -50640785 - MER3 DNA MER1_type -60 149 30 * 1698 125 66 7 chr20 21513087 21513375 -50640507 + MER4C LTR ERV1 161 465 0 1287 137 31 9 chr20 21513375 21513601 -50640281 + MER4D LTR ERV1 609 839 -33 2479 51 0 10 chr20 21513622 21513914 -50639968 + AluY SINE Alu 1 289 -22 271 150 0 0 chr20 21513915 21513955 -50639927 - MER3 DNA MER1_type -167 42 3 365 241 142 14 chr20 21514068 21514209 -50639673 - HAL1 LINE L1 -2017 490 332 2035 116 28 0 chr20 21514342 21514627 -50639255 - AluSx SINE Alu -19 293 1 26 0 0 0 chr20 21514999 21515025 -50638857 + AT_rich Low_complexity Low_complexity 1 26 0 2007 121 4 7 chr20 21515947 21516228 -50637654 + AluJo SINE Alu 1 280 -32 395 160 120 88 chr20 21516441 21516566 -50637316 + Charlie4 DNA MER1_type 1818 1946 -15 327 267 276 0 chr20 21516721 21516837 -50637045 + MER5A DNA MER1_type 42 189 0 324 265 61 31 chr20 21516837 21516935 -50636947 - MIR3 SINE MIR -48 160 60 2172 121 0 13 chr20 21517266 21517571 -50636311 + AluJb SINE Alu 1 301 -11 210 346 82 30 chr20 21517886 21518155 -50635727 + L2 LINE L2 2466 2748 -566 209 296 56 0 chr20 21518507 21518561 -50635321 - L2 LINE L2 -63 3209 3153 356 290 147 31 chr20 21518689 21518919 -50634963 - L2 LINE L2 -224 3048 2763 1773 164 3 11 chr20 21518919 21519242 -50634640 + AluJo SINE Alu 1 321 0 356 290 147 31 chr20 21519242 21519312 -50634570 - L2 LINE L2 -509 2763 2703 313 226 48 12 chr20 21519377 21519461 -50634421 - MLT1J2 LTR MaLR -21 429 343 21 82 0 0 chr20 21519535 21519584 -50634298 + AT_rich Low_complexity Low_complexity 1 49 0 389 213 33 109 chr20 21519634 21519817 -50634065 - MLT1J2 LTR MaLR -274 176 8 365 310 240 21 chr20 21519829 21520216 -50633666 - L2 LINE L2 -679 2635 2164 257 335 126 6 chr20 21520427 21520594 -50633288 + L2 LINE L2 1386 1572 -1742 753 132 0 0 chr20 21520651 21520757 -50633125 + AluSp/q SINE Alu 193 298 -15 586 249 254 0 chr20 21520761 21520938 -50632944 + MIR SINE MIR 31 252 -10 240 319 112 12 chr20 21521184 21521353 -50632529 + L2 LINE L2 1912 2097 -1217 677 199 20 20 chr20 21522587 21522738 -50631144 - L1PB4 LINE L1 0 6156 6006 265 181 113 0 chr20 21522740 21522810 -50631072 - L1PA12 LINE L1 -187 5978 5901 4695 158 39 30 chr20 21522813 21523784 -50630098 - L1MB7 LINE L1 -9 6175 5191 598 229 25 0 chr20 21523899 21524017 -50629865 - FLAM_C SINE Alu -12 121 1 1370 138 36 20 chr20 21524051 21524270 -50629612 + L1MB8 LINE L1 5603 5828 -350 781 268 0 0 chr20 21524270 21524427 -50629455 + FAM SINE Alu 2 158 -17 1370 138 36 20 chr20 21524427 21524460 -50629422 + L1MB8 LINE L1 5828 5859 -319 1062 180 82 16 chr20 21526632 21526826 -50627056 - MER3 DNA MER1_type -1 208 2 383 326 15 38 chr20 21527396 21527528 -50626354 - L2 LINE L2 -18 3254 3126 2134 95 31 17 chr20 21527868 21528162 -50625720 + AluSc SINE Alu 2 299 -10 1084 186 5 15 chr20 21528424 21528623 -50625259 + MER6B DNA MER2_type 14 210 0 233 202 29 106 chr20 21529158 21529262 -50624620 + L1MC4 LINE L1 7918 8013 -29 307 225 96 20 chr20 21530379 21530484 -50623398 + MIR3 SINE MIR 44 156 -52 2295 89 3 20 chr20 21530943 21531245 -50622637 + AluSq SINE Alu 1 297 -16 852 259 65 60 chr20 21531665 21532062 -50621820 - L1ME3A LINE L1 -1 6169 5771 1773 143 49 7 chr20 21533470 21533756 -50620126 + AluJo SINE Alu 1 298 -14 22 70 0 0 chr20 21533833 21533876 -50620006 + AT_rich Low_complexity Low_complexity 1 43 0 1186 102 161 5 chr20 21533970 21534175 -50619707 + MER7A DNA MER2_type 39 273 -73 904 195 0 0 chr20 21534333 21534492 -50619390 - FRAM SINE Alu -19 157 1 240 254 48 0 chr20 21534787 21534850 -50619032 + MER5A DNA MER1_type 117 182 -7 406 283 131 7 chr20 21535445 21535590 -50618292 - MIR3 SINE MIR -29 179 17 363 228 33 0 chr20 21542920 21543012 -50610870 - Charlie8 DNA MER1_type -2296 121 27 1136 208 19 0 chr20 21544125 21544341 -50609541 - AluJo SINE Alu -92 220 1 226 290 89 48 chr20 21548223 21548347 -50605535 + MIR3 SINE MIR 74 202 -6 2076 122 0 0 chr20 21548772 21549067 -50604815 + AluSx SINE Alu 1 295 -17 285 267 60 0 chr20 21550344 21550460 -50603422 + MLT1K LTR MaLR 151 273 -315 346 286 131 50 chr20 21553168 21553465 -50600417 + L2 LINE L2 2053 2373 -941 406 270 101 0 chr20 21553973 21554121 -50599761 + MER58B DNA MER1_type 171 333 -8 260 232 158 0 chr20 21554124 21554219 -50599663 + MER58B DNA MER1_type 220 329 -12 444 122 14 0 chr20 21555555 21555629 -50598253 + MER116 DNA Mariner 1 75 -5 573 288 123 28 chr20 21557083 21557295 -50596587 - MIR SINE MIR -17 245 14 845 307 17 8 chr20 21558160 21558401 -50595481 + MIR SINE MIR 20 262 0 237 324 122 22 chr20 21563010 21563149 -50590733 - MIR SINE MIR -63 199 47 2348 81 3 3 chr20 21564734 21565043 -50588839 + AluSp SINE Alu 1 309 -4 1392 207 24 54 chr20 21569793 21570127 -50583755 + MER33 DNA MER1_type 1 324 0 319 311 34 62 chr20 21571292 21571501 -50582381 - Charlie8 DNA MER1_type -2199 218 16 812 278 74 0 chr20 21571513 21571743 -50582139 + MIR SINE MIR 2 248 -14 196 304 130 43 chr20 21574461 21574576 -50579306 + MIR SINE MIR 64 188 -74 268 267 35 0 chr20 21575298 21575384 -50578498 - L1ME4a LINE L1 -34 6087 5999 461 297 167 7 chr20 21576418 21576718 -50577164 + L1ME4a LINE L1 5547 5894 -227 1021 194 24 29 chr20 21577319 21577525 -50576357 + MER3 DNA MER1_type 5 209 0 2329 90 7 0 chr20 21578676 21578977 -50574905 + AluSx SINE Alu 1 303 -9 604 141 148 39 chr20 21580310 21580438 -50573444 - FLAM_C SINE Alu -1 142 1 316 328 104 0 chr20 21580771 21580896 -50572986 - L1ME4a LINE L1 -448 5673 5536 24 32 0 0 chr20 21580896 21580927 -50572955 + AT_rich Low_complexity Low_complexity 1 31 0 443 221 57 64 chr20 21581018 21581158 -50572724 + MER5A DNA MER1_type 16 154 -35 465 122 61 0 chr20 21582676 21582774 -50571108 + GA-rich Low_complexity Low_complexity 2 105 0 357 189 18 140 chr20 21583474 21583638 -50570244 + MLT1H LTR MaLR 406 549 0 239 295 0 0 chr20 21585396 21585457 -50568425 + CT-rich Low_complexity Low_complexity 3 63 0 252 278 165 38 chr20 21586025 21586237 -50567645 - Charlie8 DNA MER1_type -2141 276 38 2536 52 0 19 chr20 21587102 21587412 -50566470 + AluY SINE Alu 1 304 -7 812 169 0 22 chr20 21588015 21588151 -50565731 + FLAM_C SINE Alu 1 133 0 2623 173 89 2 chr20 21589061 21589565 -50564317 - MER44D DNA MER2_type 0 605 3 346 290 13 77 chr20 21590069 21590224 -50563658 - L1MC4 LINE L1 -4 8021 5918 1603 114 0 5 chr20 21590491 21590710 -50563172 - AluSg/x SINE Alu -10 300 83 371 333 141 16 chr20 21590931 21591186 -50562696 - L1MC4 LINE L1 -1096 5033 4747 467 311 104 48 chr20 21591211 21591347 -50562535 - L1MC4 LINE L1 -1534 4595 4468 785 183 8 0 chr20 21591347 21591478 -50562404 + FLAM_A SINE Alu 1 132 -1 467 311 104 48 chr20 21591478 21592375 -50561507 - L1MC4 LINE L1 -1661 4468 3494 321 282 77 12 chr20 21592491 21592661 -50561221 - L1MC4 LINE L1 -3006 3123 2943 325 282 116 38 chr20 21592891 21593355 -50560527 - L1MC4 LINE L1 -4500 1639 1121 326 296 56 31 chr20 21593456 21593652 -50560230 - L1MC4 LINE L1 -5357 762 562 419 308 68 56 chr20 21593673 21594085 -50559797 - L1MC4 LINE L1 -5643 476 60 922 299 152 21 chr20 21594787 21595532 -50558350 - L1M4 LINE L1 -1699 4447 3606 500 301 92 0 chr20 21595993 21596275 -50557607 - L1MEd LINE L1 -4917 1202 895 1734 242 113 15 chr20 21597677 21598263 -50555619 + L1ME3A LINE L1 5528 6170 0 2368 93 3 0 chr20 21598529 21598829 -50555053 - AluSx SINE Alu -11 301 1 2137 73 28 10 chr20 21599603 21599891 -50553991 + AluY SINE Alu 1 293 -18 764 255 210 30 chr20 21600475 21601047 -50552835 - L2 LINE L2 -1 3312 2558 1645 201 10 7 chr20 21601047 21601346 -50552536 + AluJb SINE Alu 1 300 -12 764 255 210 30 chr20 21601346 21601565 -50552317 - L2 LINE L2 -755 2558 2380 287 177 32 32 chr20 21601522 21601584 -50552298 - MIR SINE MIR -64 144 83 * 234 284 168 13 chr20 21601713 21601868 -50552014 - MER102a DNA MER1_type -31 299 121 2026 156 10 0 chr20 21601868 21602169 -50551713 - AluJb SINE Alu -8 304 1 2431 103 3 0 chr20 21602679 21602991 -50550891 + AluSq SINE Alu 1 313 0 299 213 0 0 chr20 21603623 21603684 -50550198 + MER116 DNA Mariner 19 79 -1 820 182 155 0 chr20 21603746 21603927 -50549955 + MER3 DNA MER1_type 1 209 0 213 200 153 35 chr20 21604445 21604530 -50549352 - L2 LINE L2 -12 3301 3207 199 344 102 8 chr20 21605730 21605858 -50548024 - MIR SINE MIR -88 174 35 21 0 0 0 chr20 21606211 21606232 -50547650 + GC_rich Low_complexity Low_complexity 1 21 0 37 39 0 0 chr20 21606314 21606365 -50547517 + GC_rich Low_complexity Low_complexity 1 51 0 31 96 0 0 chr20 21606526 21606620 -50547262 + GC_rich Low_complexity Low_complexity 1 94 0 180 0 0 0 chr20 21606757 21606777 -50547105 + (CCCCG)n Simple_repeat Simple_repeat 3 22 0 38 39 0 0 chr20 21607001 21607053 -50546829 + GC_rich Low_complexity Low_complexity 1 52 0 206 147 59 29 chr20 21607070 21607138 -50546744 + (CCCGG)n Simple_repeat Simple_repeat 4 73 0 277 228 40 20 chr20 21607564 21607665 -50546217 + (CGGGG)n Simple_repeat Simple_repeat 2 104 0 276 30 0 0 chr20 21608911 21608944 -50544938 + (TTCA)n Simple_repeat Simple_repeat 1 33 0 186 309 75 43 chr20 21609048 21609142 -50544740 + L2 LINE L2 3211 3307 -6 539 268 66 5 chr20 21609157 21609370 -50544512 - LTR16C LTR ERVL -98 393 168 263 227 187 0 chr20 21610261 21610336 -50543546 + FRAM/FAM SINE Alu 1 86 -80 552 140 0 0 chr20 21610341 21610434 -50543448 + (GGAGAA)n Simple_repeat Simple_repeat 5 97 0 392 217 124 31 chr20 21610574 21610703 -50543179 + L1ME1 LINE L1 6021 6161 -5 716 239 36 9 chr20 21610976 21611192 -50542690 - MIR SINE MIR -1 261 39 294 303 82 81 chr20 21611342 21611864 -50542018 - L2 LINE L2 -662 2652 2130 464 200 64 71 chr20 21611896 21612036 -50541846 - MLT1H LTR MaLR 0 549 404 315 312 114 30 chr20 21612278 21612541 -50541341 - L2 LINE L2 -1223 2091 1807 1022 287 76 40 chr20 21612551 21613234 -50540648 - L2 LINE L2 0 3313 2593 2065 174 42 28 chr20 21613235 21613661 -50540221 + MER63B DNA MER1_type 4 435 -1 273 98 0 0 chr20 21613691 21613732 -50540150 + (TG)n Simple_repeat Simple_repeat 1 41 0 1239 260 178 5 chr20 21613953 21614364 -50539518 - LTR16C LTR ERVL -9 482 1 2152 142 0 3 chr20 21614466 21614776 -50539106 + AluSx SINE Alu 1 309 -3 250 298 152 39 chr20 21615157 21615335 -50538547 - MIR SINE MIR 0 262 65 192 355 65 7 chr20 21615720 21615858 -50538024 - L3 LINE CR1 0 1577 1432 455 328 8 0 chr20 21615908 21616033 -50537849 - L2 LINE L2 0 3313 3188 254 287 55 152 chr20 21616789 21617078 -50536804 - L3b LINE CR1 -197 1386 1126 21 0 0 0 chr20 21617150 21617171 -50536711 + AT_rich Low_complexity Low_complexity 1 21 0 237 33 0 0 chr20 21617512 21617542 -50536340 + (TG)n Simple_repeat Simple_repeat 1 30 0 1951 159 10 0 chr20 21617742 21618038 -50535844 - AluSx SINE Alu -13 299 1 340 222 125 21 chr20 21618112 21618256 -50535626 - L1ME4a LINE L1 0 6121 5963 766 286 172 15 chr20 21619214 21619626 -50534256 - L2 LINE L2 -1 3312 2836 2028 156 0 9 chr20 21619728 21620043 -50533839 - AluJb SINE Alu 0 312 1 346 266 65 41 chr20 21620078 21620224 -50533658 - MIR3 SINE MIR -45 163 11 1775 135 54 24 chr20 21620294 21620591 -50533291 + AluJb SINE Alu 1 306 -6 240 235 25 25 chr20 21620624 21620705 -50533177 - L1ME4a LINE L1 -73 6048 5968 180 0 0 0 chr20 21620723 21620743 -50533139 + (TG)n Simple_repeat Simple_repeat 2 21 0 1820 212 33 29 chr20 21620800 21621285 -50532597 - L1ME2 LINE L1 -9 6155 5669 835 193 0 0 chr20 21621286 21621426 -50532456 - FLAM_C SINE Alu -3 140 1 1236 168 99 8 chr20 21621431 21621693 -50532189 - L1ME2 LINE L1 -494 5670 5385 279 79 0 0 chr20 21622068 21622106 -50531776 + (ATG)n Simple_repeat Simple_repeat 1 38 0 1537 236 69 22 chr20 21622694 21622863 -50531019 - LTR16C LTR ERVL -1 490 331 2121 172 63 29 chr20 21622863 21623044 -50530838 + MSTB LTR MaLR 1 174 -252 2293 114 0 9 chr20 21623044 21623359 -50530523 + AluSq SINE Alu 1 312 -1 2121 172 63 29 chr20 21623359 21623589 -50530293 + MSTB LTR MaLR 174 426 0 1537 236 69 22 chr20 21623589 21623880 -50530002 - LTR16C LTR ERVL -160 331 8 1001 215 0 11 chr20 21624078 21624264 -50529618 + MER5A DNA MER1_type 6 189 0 185 240 80 0 chr20 21626519 21626569 -50527313 + L3 LINE CR1 1077 1130 -447 378 300 147 18 chr20 21626590 21626760 -50527122 + L3 LINE CR1 1383 1574 -3 208 302 151 0 chr20 21626846 21626952 -50526930 - MIR3 SINE MIR -23 185 64 311 326 97 41 chr20 21627060 21627256 -50526626 - MIR SINE MIR -6 256 50 528 256 98 0 chr20 21627916 21628080 -50525802 + MER3 DNA MER1_type 10 189 -20 392 328 175 19 chr20 21628097 21628515 -50525367 + L2 LINE L2 2809 3291 -22 385 270 137 19 chr20 21628598 21628859 -50525023 - MLT1H1 LTR MaLR -16 539 231 2155 99 23 20 chr20 21628862 21629164 -50524718 - AluSx SINE Alu -9 303 1 361 221 157 21 chr20 21629164 21629304 -50524578 - MLT1H1 LTR MaLR -309 240 82 435 289 208 0 chr20 21629373 21629522 -50524360 - MER5A DNA MER1_type -1 188 9 762 262 177 14 chr20 21629823 21630190 -50523692 - MLT1K LTR MaLR -11 577 151 343 313 36 0 chr20 21630267 21630379 -50523503 - MLT1K LTR MaLR -412 176 61 283 222 0 0 chr20 21630709 21630763 -50523119 + MER103 DNA DNA 64 117 -49 408 234 96 0 chr20 21630816 21630910 -50522972 - MIR SINE MIR -59 149 47 612 279 45 25 chr20 21631557 21631758 -50522124 + MIR SINE MIR 50 254 -8 2255 68 24 24 chr20 21632223 21632517 -50521365 + AluY SINE Alu 1 294 -17 2207 123 0 0 chr20 21632709 21633001 -50520881 - AluSq SINE Alu -21 292 1 1916 144 9 75 chr20 21633041 21633374 -50520508 + AluSx SINE Alu 1 311 -1 535 246 21 14 chr20 21633493 21633635 -50520247 + Charlie8 DNA MER1_type 49 191 -2226 331 240 64 40 chr20 21634866 21634991 -50518891 + MIR SINE MIR 120 247 -15 582 272 108 15 chr20 21635047 21635315 -50518567 - LTR16C LTR ERVL -48 443 151 336 315 140 20 chr20 21635425 21635625 -50518257 + MIR SINE MIR 20 243 -19 878 185 11 11 chr20 21636076 21636260 -50517622 - MER53 DNA DNA -5 184 1 763 208 158 67 chr20 21636570 21636988 -50516894 - LTR16A1 LTR ERVL 0 457 2 2038 173 70 70 chr20 21637913 21638087 -50515795 + L1MB2 LINE L1 5640 5812 -359 1658 143 37 37 chr20 21638087 21638381 -50515501 + AluJo SINE Alu 1 294 -18 2038 173 70 70 chr20 21638381 21638672 -50515210 + L1MB2 LINE L1 5812 6124 -47 1898 143 0 14 chr20 21638672 21638989 -50514893 + AluJo SINE Alu 3 315 0 2038 173 70 70 chr20 21638989 21639036 -50514846 + L1MB2 LINE L1 6124 6169 -2 2080 120 36 10 chr20 21639047 21639348 -50514534 + AluSx SINE Alu 3 311 -1 1238 232 36 42 chr20 21639743 21640079 -50513803 - MER46C DNA MER2_type -4 334 1 195 284 45 23 chr20 21640181 21640269 -50513613 - MIR SINE MIR -95 113 24 214 227 0 61 chr20 21640474 21640540 -50513342 + L2 LINE L2 3211 3272 0 208 339 0 0 chr20 21640802 21640864 -50513018 + L2 LINE L2 3252 3313 0 806 274 48 34 chr20 21640886 21641178 -50512704 - MLT1K LTR MaLR -3 585 290 1199 158 81 5 chr20 21641451 21641660 -50512222 - AluJb SINE Alu -1 311 87 1764 149 80 3 chr20 21641703 21641991 -50511891 + AluSx SINE Alu 1 310 -2 720 134 0 25 chr20 21642018 21642137 -50511745 - FLAM_C SINE Alu -26 117 2 1865 109 109 7 chr20 21643320 21643596 -50510286 - AluSg SINE Alu -6 304 1 2262 97 0 23 chr20 21644252 21644551 -50509331 - AluSq SINE Alu -19 294 3 249 290 14 0 chr20 21644565 21644634 -50509248 + MIR3 SINE MIR 91 160 -48 662 181 19 151 chr20 21644723 21644928 -50508954 + MER5B DNA MER1_type 1 178 0 180 135 54 0 chr20 21645048 21645085 -50508797 + L2 LINE L2 3270 3308 -5 885 277 102 11 chr20 21645377 21645731 -50508151 + MER113 DNA MER1_type? 61 446 -75 680 283 45 18 chr20 21646356 21646579 -50507303 + MIR SINE MIR 18 246 -16 1352 283 31 5 chr20 21646770 21647162 -50506720 - L1MC4a LINE L1 -1873 5935 5534 1158 192 121 42 chr20 21647170 21647243 -50506639 - Charlie4a DNA MER1_type -1502 459 393 1950 204 17 0 chr20 21647243 21647600 -50506282 - MLT1A1 LTR MaLR -2 363 1 1158 192 121 42 chr20 21647600 21647907 -50505975 - Charlie4a DNA MER1_type -1568 393 49 22 35 0 0 chr20 21648219 21648248 -50505634 + AT_rich Low_complexity Low_complexity 1 29 0 2013 116 34 17 chr20 21648418 21648712 -50505170 + AluSx SINE Alu 1 299 -13 2448 75 3 13 chr20 21648712 21649020 -50504862 + AluY SINE Alu 6 310 -1 313 211 0 26 chr20 21650166 21650242 -50503640 - MER91A DNA MER1_type -122 74 1 1016 209 47 5 chr20 21650828 21651043 -50502839 - MER58A DNA MER1_type 0 224 1 210 235 62 25 chr20 21651128 21651209 -50502673 - MIR SINE MIR -57 205 122 405 290 121 0 chr20 21654635 21654759 -50499123 + L2 LINE L2 3134 3272 0 227 312 65 40 chr20 21654789 21654988 -50498894 + L1ME3 LINE L1 244 447 -5672 203 302 62 42 chr20 21656208 21656304 -50497578 - MIR SINE MIR -108 154 57 38653 77 19 7 chr20 21657151 21663218 -50490664 + L1PA6 LINE L1 11 6151 -3 420 233 67 83 chr20 21663778 21663971 -50489911 + L1MC5 LINE L1 7740 7929 -32 783 226 59 0 chr20 21664160 21664346 -50489536 - MIR SINE MIR -18 244 48 327 274 88 0 chr20 21666832 21666945 -50486937 + MIR SINE MIR 120 242 -20 294 73 0 0 chr20 21667842 21667883 -50485999 + (A)n Simple_repeat Simple_repeat 1 41 0 277 274 53 9 chr20 21668247 21668360 -50485522 + L1ME3 LINE L1 3990 4107 -2022 433 287 62 3 chr20 21668372 21668661 -50485221 + L1ME3 LINE L1 4386 4691 -1438 223 250 0 0 chr20 21668661 21668713 -50485169 + GA-rich Low_complexity Low_complexity 1 52 0 402 260 117 38 chr20 21668755 21669097 -50484785 + L1ME3 LINE L1 4708 5076 -1053 2649 165 43 10 chr20 21669107 21669593 -50484289 - MER4E LTR ERV1 -28 748 252 514 267 83 27 chr20 21669600 21670306 -50483576 + L1ME3 LINE L1 5069 5871 -282 2389 82 0 0 chr20 21670532 21670825 -50483057 - AluSg SINE Alu -17 293 1 1863 140 46 7 chr20 21670825 21671110 -50482772 - AluSx SINE Alu -16 296 1 24 67 0 0 chr20 21671221 21671266 -50482616 + AT_rich Low_complexity Low_complexity 1 45 0 917 256 114 48 chr20 21671621 21672042 -50481840 - MLT1J2 LTR MaLR 0 450 2 2091 115 55 30 chr20 21672102 21672466 -50481416 + THE1C LTR MaLR 1 373 -2 1594 208 51 58 chr20 21672531 21672998 -50480884 - MLT2C2 LTR ERVL 0 464 1 664 227 148 10 chr20 21673042 21673245 -50480637 + MIR SINE MIR 11 241 -21 1033 235 113 88 chr20 21673615 21674023 -50479859 - MLT1H LTR MaLR -17 532 115 1979 131 7 3 chr20 21674765 21675062 -50478820 + AluJb SINE Alu 15 312 0 816 219 91 30 chr20 21675723 21675988 -50477894 - L1ME3A LINE L1 -1 6169 5889 216 86 0 0 chr20 21676257 21676292 -50477590 + (CAGAGA)n Simple_repeat Simple_repeat 2 36 0 839 257 130 17 chr20 21677074 21677436 -50476446 - LTR16C LTR ERVL 0 491 89 358 226 19 0 chr20 21679820 21679926 -50473956 + CT-rich Low_complexity Low_complexity 1 108 0 634 160 11 27 chr20 21679940 21680294 -50473588 + CT-rich Low_complexity Low_complexity 1 348 0 22 35 0 0 chr20 21680944 21680973 -50472909 + AT_rich Low_complexity Low_complexity 1 29 0 268 349 24 48 chr20 21681263 21681472 -50472410 - L2 LINE L2 -4 3309 3106 423 299 206 16 chr20 21683012 21683396 -50470486 - LTR16B LTR ERVL 0 464 8 671 235 24 0 chr20 21683713 21683879 -50470003 - MLT1G LTR MaLR 0 590 421 22 0 0 0 chr20 21684255 21684277 -50469605 + AT_rich Low_complexity Low_complexity 1 22 0 1187 252 77 19 chr20 21684630 21685047 -50468835 + LTR16A1 LTR ERVL 4 444 -13 1796 152 50 0 chr20 21685173 21685456 -50468426 - AluJb SINE Alu -15 297 1 293 200 14 14 chr20 21685716 21685786 -50468096 - LTR37B LTR ERV1 -258 210 141 246 330 0 0 chr20 21685813 21685901 -50467981 + MER58A DNA MER1_type 1 88 -19 225 325 111 17 chr20 21686097 21686214 -50467668 + MIR SINE MIR 16 143 -65 2232 118 0 3 chr20 21686618 21686914 -50466968 + AluSq SINE Alu 6 300 -13 2148 124 71 42 chr20 21687510 21687864 -50466018 - THE1B LTR MaLR 0 364 1 1898 124 17 75 chr20 21687874 21688221 -50465661 + MLT1C LTR MaLR 1 327 -140 386 162 15 0 chr20 21688328 21688396 -50465486 + MLT1C LTR MaLR 372 440 -27 393 231 179 17 chr20 21688747 21688864 -50465018 - MER63 DNA MER1_type -73 763 2 1120 260 94 44 chr20 21690624 21691058 -50462824 - LTR16C LTR ERVL 0 491 36 633 176 9 9 chr20 21691959 21692067 -50461815 - MER81 DNA DNA -4 110 3 350 328 99 0 chr20 21692474 21692605 -50461277 - MLT1I LTR MaLR -265 144 1 1753 142 0 72 chr20 21693005 21693337 -50460545 + AluSx SINE Alu 1 308 -4 378 275 103 63 chr20 21693384 21694095 -50459787 + L1ME4a LINE L1 5350 6099 -22 659 213 94 25 chr20 21694573 21694775 -50459107 - MER20 DNA MER1_type 0 219 4 1240 142 111 66 chr20 21694928 21695216 -50458666 - AluJo SINE Alu -1 301 1 276 235 211 24 chr20 21695334 21695500 -50458382 + LTR33A LTR ERVL 327 523 0 353 217 0 0 chr20 21695524 21695579 -50458303 + L1MC4 LINE L1 6636 6693 -1349 2110 89 14 0 chr20 21695579 21695860 -50458022 - AluSp SINE Alu -27 286 2 353 217 0 0 chr20 21695860 21695873 -50458009 + L1MC4 LINE L1 6692 6704 -1338 2478 42 7 3 chr20 21696052 21696362 -50457520 - AluY SINE Alu 0 311 1 327 283 40 0 chr20 21696405 21696504 -50457378 + MIR SINE MIR 159 261 -1 1172 186 3 114 chr20 21696640 21696946 -50456936 - MLT1A1 LTR MaLR -93 272 1 1413 246 120 39 chr20 21697279 21697787 -50456095 - MLT1H LTR MaLR 0 549 1 1816 98 148 0 chr20 21697950 21698214 -50455668 - AluSx SINE Alu -9 303 1 202 239 18 37 chr20 21699153 21699262 -50454620 + (TA)n Simple_repeat Simple_repeat 1 107 0 1976 117 27 3 chr20 21701998 21702296 -50451586 + AluSx SINE Alu 1 305 -7 189 300 0 33 chr20 21703436 21703496 -50450386 - MIR3 SINE MIR -23 185 128 961 258 118 7 chr20 21704246 21704573 -50449309 - LTR16A1 LTR ERVL -19 469 100 271 299 88 36 chr20 21704921 21705058 -50448824 + L3 LINE CR1 1223 1366 -211 408 184 101 9 chr20 21705145 21705254 -50448628 - L1ME3A LINE L1 -5 6165 6047 1778 246 86 0 chr20 21705286 21705717 -50448165 - L1ME3A LINE L1 -311 5859 5392 212 329 22 58 chr20 21705717 21705854 -50448028 - MER5A DNA MER1_type -33 156 25 560 199 146 82 chr20 21705971 21706238 -50447644 - MLT1J LTR MaLR -4 507 224 186 43 0 0 chr20 21706241 21706264 -50447618 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 231 114 0 0 chr20 21706264 21706299 -50447583 + (GA)n Simple_repeat Simple_repeat 2 36 0 523 262 39 52 chr20 21706310 21706543 -50447339 - MLT1J LTR MaLR -260 251 22 192 253 120 13 chr20 21706575 21706650 -50447232 + MIR3 SINE MIR 93 175 -33 467 271 80 20 chr20 21706881 21707032 -50446850 - MIR SINE MIR -26 236 77 344 269 50 25 chr20 21707395 21707514 -50446368 - MIR3 SINE MIR -5 203 82 1060 60 0 0 chr20 21707847 21707980 -50445902 + L1MA3 LINE L1 6173 6305 0 254 275 69 46 chr20 21708055 21708186 -50445696 - MER5A DNA MER1_type -6 183 50 * 274 272 35 26 chr20 21708073 21708187 -50445695 + MER5B DNA MER1_type 26 140 -38 463 156 100 0 chr20 21708274 21708364 -50445518 + MER5B DNA MER1_type 80 178 0 256 323 194 7 chr20 21708379 21708534 -50445348 - MER5A DNA MER1_type -5 184 1 215 317 154 0 chr20 21708623 21708727 -50445155 + L2 LINE L2 3136 3255 -17 28 0 0 0 chr20 21708876 21708904 -50444978 + AT_rich Low_complexity Low_complexity 1 28 0 1439 46 14 60 chr20 21709543 21709760 -50444122 - L1PA5 LINE L1 -1 6153 5947 486 247 72 6 chr20 21709939 21710105 -50443777 + MER112 DNA MER1_type 5 181 -79 724 210 19 25 chr20 21710126 21710288 -50443594 - MER5B DNA MER1_type 0 178 18 202 333 143 24 chr20 21710412 21710496 -50443386 - L2 LINE L2 -19 3253 3160 2095 230 77 13 chr20 21710506 21711115 -50442767 - L1ME3A LINE L1 -72 6098 5451 1779 153 4 4 chr20 21711698 21712003 -50441879 - AluJo SINE Alu 0 305 1 211 135 162 0 chr20 21712041 21712078 -50441804 + MER91B DNA MER1_type 22 64 -126 942 259 67 7 chr20 21712149 21712492 -50441390 - L1ME3A LINE L1 -76 6094 5734 183 314 0 0 chr20 21712635 21712686 -50441196 + MIR SINE MIR 103 153 -109 964 267 113 3 chr20 21712699 21713010 -50440872 - L1ME2 LINE L1 -9 6155 5811 1474 250 64 15 chr20 21713265 21713737 -50440145 - Charlie4a DNA MER1_type -6 502 8 240 262 196 0 chr20 21713749 21713856 -50440026 + MIR SINE MIR 124 251 -11 433 290 101 42 chr20 21715456 21715673 -50438209 - MIR SINE MIR -21 241 12 282 307 66 25 chr20 21715762 21715893 -50437989 - MIR SINE MIR -69 139 7 836 180 99 6 chr20 21716229 21716401 -50437481 + MER3 DNA MER1_type 18 205 -4 223 320 160 0 chr20 21717262 21717362 -50436520 - MIR3 SINE MIR -14 194 79 450 260 10 0 chr20 21717457 21717557 -50436325 + L2 LINE L2 3211 3311 -2 2156 100 0 0 chr20 21718604 21718893 -50434989 - AluSx SINE Alu -15 297 9 2200 92 3 0 chr20 21719122 21719425 -50434457 - AluSg SINE Alu -6 304 1 238 209 0 81 chr20 21719637 21719723 -50434159 - L1ME4a LINE L1 0 6121 6043 470 212 281 37 chr20 21720135 21720352 -50433530 + LTR16A1 LTR ERVL 4 273 -184 758 228 66 22 chr20 21721016 21721407 -50432475 - LTR16A1 LTR ERVL 0 457 3 860 220 0 41 chr20 21722342 21722560 -50431322 - MER3 DNA MER1_type 0 209 1 192 218 26 13 chr20 21722576 21722654 -50431228 + (TA)n Simple_repeat Simple_repeat 1 79 0 225 0 0 0 chr20 21723346 21723371 -50430511 + (TTTTA)n Simple_repeat Simple_repeat 3 27 0 21 0 0 0 chr20 21723401 21723422 -50430460 + AT_rich Low_complexity Low_complexity 1 21 0 180 291 13 63 chr20 21724340 21724419 -50429463 + L2 LINE L2 3198 3272 0 2440 55 7 0 chr20 21725552 21725859 -50428023 + AluY SINE Alu 1 309 -2 255 341 16 47 chr20 21725870 21725999 -50427883 - MIR SINE MIR -135 127 3 2521 55 0 0 chr20 21726214 21726523 -50427359 - AluY SINE Alu -2 309 1 857 244 16 5 chr20 21726618 21726811 -50427071 - LTR16C LTR ERVL 0 491 297 253 227 99 116 chr20 21727055 21727133 -50426749 - MIR3 SINE MIR -23 185 107 2200 112 0 3 chr20 21727133 21727446 -50426436 + AluSx SINE Alu 1 312 0 253 227 99 116 chr20 21727446 21727539 -50426343 - MIR3 SINE MIR -101 107 17 189 0 0 0 chr20 21728377 21728398 -50425484 + (A)n Simple_repeat Simple_repeat 1 21 0 231 195 49 37 chr20 21729912 21729994 -50423888 + L1MC4 LINE L1 6616 6698 -1344 807 214 37 81 chr20 21730768 21730887 -50422995 - MER112 DNA MER1_type 0 260 137 396 59 0 0 chr20 21730887 21730938 -50422944 + (AATAG)n Simple_repeat Simple_repeat 2 52 0 807 214 37 81 chr20 21730938 21731089 -50422793 - MER112 DNA MER1_type -123 137 2 600 249 154 71 chr20 21731098 21731498 -50422384 - MLT1J2 LTR MaLR 0 450 1 27 87 0 0 chr20 21731640 21731709 -50422173 + AT_rich Low_complexity Low_complexity 1 69 0 979 155 6 0 chr20 21731749 21731910 -50421972 + AluJb SINE Alu 134 295 -17 1895 113 19 44 chr20 21733821 21733856 -50420026 - AluSx SINE Alu -2 310 276 222 37 0 0 chr20 21733856 21733883 -50419999 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1895 113 19 44 chr20 21733883 21734165 -50419717 - AluSx SINE Alu -36 276 1 853 217 136 5 chr20 21734325 21734523 -50419359 + MER58A DNA MER1_type 1 224 0 516 320 35 35 chr20 21734623 21734882 -50419000 + LTR16C LTR ERVL 140 398 -93 420 156 125 16 chr20 21734879 21735007 -50418875 - LTR50 LTR ERVL -14 781 640 * 1143 192 225 15 chr20 21735474 21735705 -50418177 - LTR50 LTR ERVL -166 629 448 2278 150 8 3 chr20 21735705 21736066 -50417816 - MLT1A1 LTR MaLR 0 365 3 1143 192 225 15 chr20 21736066 21736279 -50417603 - LTR50 LTR ERVL -347 448 10 276 162 40 27 chr20 21736282 21736356 -50417526 + LTR16C LTR ERVL 408 482 -9 1023 282 52 24 chr20 21736835 21737218 -50416664 - LTR16C LTR ERVL 0 491 98 798 299 76 24 chr20 21737824 21738282 -50415600 + L2 LINE L2 2832 3313 0 251 273 0 0 chr20 21739075 21739130 -50414752 + L2 LINE L2 3217 3271 -1 1002 253 94 14 chr20 21739256 21739659 -50414223 + LTR16C LTR ERVL 2 489 -2 529 256 85 0 chr20 21742059 21742223 -50411659 - MER45A DNA AcHobo 0 178 1 200 217 0 0 chr20 21743349 21743395 -50410487 + T-rich Low_complexity Low_complexity 1 46 0 226 208 0 0 chr20 21743467 21743515 -50410367 - L1MC4 LINE L1 -1340 6702 6655 277 281 0 0 chr20 21743526 21743615 -50410267 - L1MC4 LINE L1 -1339 6703 6615 230 152 0 0 chr20 21743618 21743664 -50410218 - LTR66 LTR ERVL -171 439 394 291 191 0 0 chr20 21743664 21743727 -50410155 + (TA)n Simple_repeat Simple_repeat 2 64 0 444 256 45 0 chr20 21743739 21743872 -50410010 + L1MC4 LINE L1 7904 8042 0 600 243 135 46 chr20 21744567 21744826 -50409056 + L2 LINE L2 3032 3313 0 1545 171 16 23 chr20 21745277 21745581 -50408301 - AluJb SINE Alu -10 302 1 2062 111 3 0 chr20 21745684 21745973 -50407909 + AluSx SINE Alu 11 300 -12 2209 197 18 16 chr20 21746361 21746797 -50407085 + Tigger3(Golem) DNA MER2_type 1 437 -2592 250 171 29 14 chr20 21746786 21746856 -50407026 + Tigger3(Golem) DNA MER2_type 2451 2521 -508 * 437 184 51 0 chr20 21747014 21747112 -50406770 - MER5A DNA MER1_type -78 111 9 1874 92 35 0 chr20 21747317 21747577 -50406305 + AluSx SINE Alu 1 269 -43 323 78 39 0 chr20 21747597 21747648 -50406234 + AluSx SINE Alu 246 298 -4 1701 231 117 10 chr20 21748213 21748736 -50405146 + L1MC4a LINE L1 7229 7807 -1 1456 171 10 45 chr20 21749067 21749359 -50404523 - AluJb SINE Alu -25 287 6 510 213 199 0 chr20 21749530 21749671 -50404211 - MIR SINE MIR -45 217 49 209 157 78 20 chr20 21750799 21750850 -50403032 + L2 LINE L2 3121 3174 -98 266 0 29 0 chr20 21750939 21750973 -50402909 + (TTTTTG)n Simple_repeat Simple_repeat 3 37 0 506 224 86 0 chr20 21751291 21751465 -50402417 - MER5A DNA MER1_type 0 189 1 461 217 51 14 chr20 21751771 21751909 -50401973 + MER5A DNA MER1_type 3 145 -44 836 236 123 44 chr20 21751917 21752391 -50401491 + MLT1E2 LTR MaLR 7 552 -73 502 196 104 23 chr20 21752464 21752556 -50401326 + Charlie4 DNA MER1_type 1738 1821 -140 1834 165 0 3 chr20 21752556 21752859 -50401023 - AluJb SINE Alu -10 302 1 502 196 104 23 chr20 21752859 21752939 -50400943 + Charlie4 DNA MER1_type 1821 1924 -37 409 220 39 136 chr20 21753228 21753307 -50400575 + MER112 DNA MER1_type 1 86 -174 306 0 0 0 chr20 21753307 21753341 -50400541 + (TG)n Simple_repeat Simple_repeat 2 35 0 409 220 39 136 chr20 21753341 21753547 -50400335 + MER112 DNA MER1_type 86 258 -2 282 150 24 47 chr20 21753584 21753711 -50400171 + (CA)n Simple_repeat Simple_repeat 1 124 0 238 259 0 0 chr20 21754726 21754780 -50399102 - MER81 DNA DNA -58 56 3 1395 198 34 60 chr20 21755103 21755487 -50398395 + MLT1A2 LTR MaLR 1 374 0 305 377 22 0 chr20 21755561 21755699 -50398183 + MIR3 SINE MIR 30 170 -38 306 284 205 0 chr20 21756159 21756286 -50397596 - MER5A DNA MER1_type 0 189 37 188 303 165 37 chr20 21756747 21756856 -50397026 - MER5B DNA MER1_type -53 125 3 795 191 0 0 chr20 21757014 21757145 -50396737 - FLAM_A SINE Alu -2 131 1 1073 218 79 21 chr20 21757461 21757741 -50396141 + L1ME LINE L1 5301 5596 -570 1689 178 0 10 chr20 21758471 21758763 -50395119 + AluJo SINE Alu 3 291 -21 329 244 154 41 chr20 21758811 21758934 -50394948 + MIR SINE MIR 13 149 -113 650 278 104 50 chr20 21758951 21759354 -50394528 + LTR16A1 LTR ERVL 30 454 -3 255 61 0 0 chr20 21759420 21759453 -50394429 + (CAT)n Simple_repeat Simple_repeat 2 34 0 1526 204 103 24 chr20 21759707 21760162 -50393720 - LTR16C LTR ERVL 0 491 1 235 288 45 0 chr20 21760200 21760266 -50393616 - MIR SINE MIR -115 147 79 195 259 165 42 chr20 21760304 21760516 -50393366 + L3 LINE CR1 1166 1403 -174 182 146 49 24 chr20 21760922 21760963 -50392919 + MER5A DNA MER1_type 34 75 -114 * 255 143 41 0 chr20 21760960 21761009 -50392873 - MER5A DNA MER1_type -84 105 55 1132 162 0 68 chr20 21761043 21761277 -50392605 + MER20 DNA MER1_type 2 219 0 2148 100 7 0 chr20 21762081 21762370 -50391512 + AluSp SINE Alu 1 291 -22 21 36 0 0 chr20 21762370 21762398 -50391484 + AT_rich Low_complexity Low_complexity 1 28 0 193 28 0 56 chr20 21763369 21763405 -50390477 + (CAAA)n Simple_repeat Simple_repeat 3 36 0 1456 98 0 0 chr20 21763425 21763618 -50390264 - AluSx SINE Alu -119 193 1 1608 153 18 11 chr20 21763618 21763900 -50389982 - MER33 DNA MER1_type -40 284 1 245 198 198 12 chr20 21764830 21764911 -50388971 - MLT1K LTR MaLR -348 240 145 716 171 55 111 chr20 21766111 21766310 -50387572 + MER5A DNA MER1_type 1 188 -1 205 255 13 67 chr20 21766649 21766798 -50387084 + CT-rich Low_complexity Low_complexity 1 141 0 714 253 77 9 chr20 21767715 21767948 -50385934 - LTR16C LTR ERVL -8 483 235 250 407 28 7 chr20 21768226 21768371 -50385511 + MIR3 SINE MIR 23 170 -38 311 288 50 22 chr20 21768450 21768589 -50385293 + MER113 DNA MER1_type? 22 164 -357 437 227 15 76 chr20 21768781 21768913 -50384969 - MIR SINE MIR -58 204 81 227 301 81 58 chr20 21769919 21770092 -50383790 + MER117 DNA MER1_type 2 178 -19 290 253 33 11 chr20 21771386 21771477 -50382405 - MIR SINE MIR -54 208 116 496 244 24 0 chr20 21771554 21771677 -50382205 + LTR16C LTR ERVL 149 274 -217 818 221 31 78 chr20 21771748 21772006 -50381876 + MLT1J LTR MaLR 17 262 -249 23 0 0 0 chr20 21772173 21772196 -50381686 + GC_rich Low_complexity Low_complexity 1 23 0 3852 148 29 24 chr20 21772196 21772919 -50380963 - L1MB3 LINE L1 -12 6171 5445 2353 66 0 3 chr20 21773482 21773783 -50380099 + AluY SINE Alu 3 302 -9 21 36 0 0 chr20 21774275 21774303 -50379579 + AT_rich Low_complexity Low_complexity 1 28 0 203 292 208 31 chr20 21774974 21775070 -50378812 + MER5A DNA MER1_type 51 163 -26 243 0 0 0 chr20 21775099 21775126 -50378756 + (TG)n Simple_repeat Simple_repeat 1 27 0 2052 102 0 11 chr20 21775126 21775410 -50378472 - AluSx SINE Alu -31 281 1 226 273 172 0 chr20 21775434 21775533 -50378349 - L1MC4a LINE L1 -1688 6120 6005 234 81 0 0 chr20 21775543 21775580 -50378302 + (TG)n Simple_repeat Simple_repeat 2 38 0 449 248 131 0 chr20 21775653 21775806 -50378076 - L1MC4a LINE L1 -1986 5822 5650 253 349 28 0 chr20 21775878 21775984 -50377898 - L1MC4a LINE L1 -2126 5682 5574 700 172 179 0 chr20 21776096 21776230 -50377652 - MER5A DNA MER1_type -28 161 4 324 272 9 29 chr20 21776312 21776422 -50377460 + MIR SINE MIR 46 152 -67 1496 186 38 22 chr20 21776442 21776759 -50377123 + L1ME2 LINE L1 5841 6162 -2 24 0 0 0 chr20 21777373 21777397 -50376485 + GC_rich Low_complexity Low_complexity 1 24 0 2263 68 27 0 chr20 21778175 21778469 -50375413 + AluSx SINE Alu 11 312 0 24 67 0 0 chr20 21778489 21778534 -50375348 + AT_rich Low_complexity Low_complexity 1 45 0 442 113 0 0 chr20 21778534 21778596 -50375286 - FLAM_A SINE Alu -27 115 54 27 0 0 0 chr20 21778700 21778727 -50375155 + AT_rich Low_complexity Low_complexity 1 27 0 692 161 7 54 chr20 21779104 21779253 -50374629 + FLAM_C SINE Alu 2 143 0 369 199 11 24 chr20 21779609 21779699 -50374183 - MLT1I LTR MaLR -265 144 72 327 214 67 22 chr20 21780042 21780131 -50373751 - MLT1I LTR MaLR -315 94 2 182 317 17 0 chr20 21780367 21780427 -50373455 + MIR SINE MIR 90 150 -112 410 298 44 0 chr20 21780439 21780553 -50373329 - MER94 DNA DNA 0 134 16 1328 217 46 108 chr20 21780583 21780772 -50373110 + L1MC4 LINE L1 7473 7672 -370 2037 121 3 7 chr20 21780772 21781078 -50372804 + AluSx SINE Alu 1 305 -7 1328 217 46 108 chr20 21781078 21781283 -50372599 + L1MC4 LINE L1 7672 7820 -222 2052 116 0 7 chr20 21781283 21781577 -50372305 + AluSc SINE Alu 1 292 -17 1328 217 46 108 chr20 21781577 21781784 -50372098 + L1MC4 LINE L1 7820 8038 -4 197 81 0 27 chr20 21781956 21781993 -50371889 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 676 188 0 8 chr20 21781994 21782111 -50371771 - FLAM_C SINE Alu -26 117 2 1592 167 67 0 chr20 21782303 21782585 -50371297 + AluJb SINE Alu 1 301 -11 253 266 255 0 chr20 21782827 21782921 -50370961 + MIR3 SINE MIR 66 183 -25 620 190 132 0 chr20 21782921 21783042 -50370840 + MLT1B LTR MaLR 1 137 -253 315 87 22 0 chr20 21783038 21783084 -50370798 + MLT1B LTR MaLR 344 390 0 * 243 258 32 0 chr20 21783617 21783679 -50370203 + MER90 LTR ERV1 512 575 0 508 228 32 150 chr20 21783679 21783870 -50370012 + L1MC4 LINE L1 7625 7728 -314 1863 164 0 10 chr20 21783870 21784182 -50369700 + AluJb SINE Alu 1 309 -3 508 228 32 150 chr20 21784182 21784464 -50369418 + L1MC4 LINE L1 7728 8042 0 1564 188 13 7 chr20 21785137 21785446 -50368436 - AluJo SINE Alu -1 311 1 1478 159 0 63 chr20 21785528 21785830 -50368052 + AluJb SINE Alu 30 312 0 465 240 0 62 chr20 21786663 21786809 -50367073 + LTR33 LTR ERVL 24 160 -361 365 233 0 44 chr20 21786866 21786956 -50366926 + LTR33 LTR ERVL 329 414 -107 1028 179 0 0 chr20 21787078 21787246 -50366636 + FAM SINE Alu 1 168 -7 550 261 43 72 chr20 21788160 21788342 -50365540 - MER63A DNA MER1_type -1478 210 33 1603 186 0 29 chr20 21788342 21788649 -50365233 + AluJo SINE Alu 1 298 -14 550 261 43 72 chr20 21788649 21788673 -50365209 - MER63A DNA MER1_type -1655 33 10 21 0 0 0 chr20 21788889 21788910 -50364972 + AT_rich Low_complexity Low_complexity 1 21 0 394 321 192 0 chr20 21789828 21790021 -50363861 + MIR SINE MIR 33 262 0 1284 218 37 3 chr20 21790055 21790353 -50363529 - LTR16C LTR ERVL -1 490 183 2776 128 58 5 chr20 21791074 21791504 -50362378 - LTR35 LTR ERV1 -2 616 164 397 184 26 26 chr20 21791511 21791563 -50362319 + AluJ/FLAM SINE Alu 1 52 -250 3459 165 2 4 chr20 21791563 21792107 -50361775 + MER41D LTR ERV1 1 543 -14 1494 166 40 146 chr20 21792107 21792453 -50361429 - THE1C LTR MaLR 0 375 -6 2149 129 0 10 chr20 21792453 21792763 -50361119 + AluSx SINE Alu 1 307 -5 1494 166 40 146 chr20 21792763 21792778 -50361104 - THE1C LTR MaLR -381 4294967290 36 2413 89 0 10 chr20 21792778 21793082 -50360800 + AluSg SINE Alu 1 301 -9 1494 166 40 146 chr20 21793082 21793116 -50360766 - THE1C LTR MaLR -338 37 1 438 218 0 0 chr20 21793135 21793213 -50360669 + AluJb SINE Alu 49 126 -186 201 192 0 19 chr20 21793213 21793265 -50360617 + (TAAA)n Simple_repeat Simple_repeat 1 51 0 525 322 94 8 chr20 21793300 21793545 -50360337 - MER66-int LTR ERV1 -1 6675 6410 2009 131 3 55 chr20 21793754 21794083 -50359799 - AluSx SINE Alu 0 312 1 3115 146 105 41 chr20 21794146 21794811 -50359071 - MER66-int LTR ERV1 -621 5710 5003 243 0 0 0 chr20 21794831 21794858 -50359024 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1839 165 0 11 chr20 21794861 21795140 -50358742 - AluJo SINE Alu -31 281 6 2454 110 40 77 chr20 21795284 21795589 -50358293 - MSTA LTR MaLR 0 428 142 2075 129 0 3 chr20 21795589 21795883 -50357999 + AluSx SINE Alu 3 295 -17 2454 110 40 77 chr20 21795883 21796021 -50357861 - MSTA LTR MaLR -286 142 1 374 234 86 91 chr20 21796148 21796163 -50357719 - MLT1J LTR MaLR -75 436 422 3024 185 14 23 chr20 21796163 21796497 -50357385 - MER41D LTR ERV1 0 557 229 2399 84 0 26 chr20 21796497 21796807 -50357075 - AluSq SINE Alu -11 302 1 3024 185 14 23 chr20 21796807 21797034 -50356848 - MER41D LTR ERV1 -328 229 1 374 234 86 91 chr20 21797034 21797145 -50356737 - MLT1J LTR MaLR -89 422 309 2493 157 36 0 chr20 21797145 21797558 -50356324 - MSTA LTR MaLR 0 428 1 374 234 86 91 chr20 21797558 21797605 -50356277 - MLT1J LTR MaLR -202 309 263 3174 253 77 17 chr20 21797644 21797735 -50356147 - L2 LINE L2 0 3313 3229 2350 112 0 6 chr20 21797735 21798049 -50355833 + AluSq SINE Alu 1 312 -1 3174 253 77 17 chr20 21798049 21799344 -50354538 - L2 LINE L2 -84 3229 1854 590 263 52 56 chr20 21799467 21799737 -50354145 - L2 LINE L2 -9 3304 3036 2006 139 0 0 chr20 21799737 21800024 -50353858 - AluSg SINE Alu -23 287 1 181 284 60 0 chr20 21800163 21800230 -50353652 - L2 LINE L2 -8 3305 3235 1942 126 44 3 chr20 21802497 21802790 -50351092 + AluSx SINE Alu 1 305 -7 234 62 0 0 chr20 21803835 21803867 -50350015 + (TTTG)n Simple_repeat Simple_repeat 4 35 0 1684 168 4 4 chr20 21803867 21804147 -50349735 - AluJb SINE Alu -32 280 1 1670 155 9 76 chr20 21804167 21804484 -50349398 - AluJo SINE Alu -16 296 1 564 291 29 0 chr20 21804486 21804661 -50349221 - MIR SINE MIR -72 190 11 1887 202 72 45 chr20 21805048 21805534 -50348348 + MLT1D LTR MaLR 1 499 -6 1116 189 26 0 chr20 21806944 21807134 -50346748 - MER58A DNA MER1_type 0 224 30 978 200 14 27 chr20 21809082 21809302 -50344580 + L1MC1 LINE L1 6092 6308 -25 1283 37 11 22 chr20 21809317 21809672 -50344210 + (GAAA)n Simple_repeat Simple_repeat 1 351 0 225 304 157 49 chr20 21810066 21810086 -50343796 + MIR SINE MIR 37 53 -209 1482 170 93 61 chr20 21810086 21810463 -50343419 - MLT1B LTR MaLR -1 389 1 225 304 157 49 chr20 21810463 21810646 -50343236 + MIR SINE MIR 53 262 0 319 316 7 33 chr20 21810651 21810803 -50343079 - MIR SINE MIR -113 149 2 504 273 17 6 chr20 21811316 21811492 -50342390 - MER5B DNA MER1_type 0 178 1 1146 171 11 91 chr20 21811514 21811789 -50342093 - MLT1C LTR MaLR -210 257 5 2307 98 10 0 chr20 21812290 21812586 -50341296 + AluSx SINE Alu 1 299 -13 8506 174 25 9 chr20 21812799 21814710 -50339172 + L1PA16 LINE L1 3559 5514 -652 2298 91 0 23 chr20 21814710 21815019 -50338863 + AluSc SINE Alu 1 302 -7 8506 174 25 9 chr20 21815019 21815674 -50338208 + L1PA16 LINE L1 5514 6157 -9 231 228 132 77 chr20 21816111 21816355 -50337527 + L1ME4a LINE L1 5699 5941 -180 234 62 0 0 chr20 21817173 21817205 -50336677 + (CA)n Simple_repeat Simple_repeat 1 32 0 592 278 104 0 chr20 21817213 21817386 -50336496 + LTR16B LTR ERVL 8 198 -266 273 254 0 0 chr20 21817509 21817568 -50336314 + LTR16B LTR ERVL 392 450 -14 336 244 0 23 chr20 21817568 21817699 -50336183 + (TA)n Simple_repeat Simple_repeat 1 128 0 380 252 40 60 chr20 21818138 21818289 -50335593 - LTR67 LTR ERVL -1 556 409 2304 106 3 0 chr20 21819142 21819443 -50334439 + AluSp SINE Alu 1 302 -11 905 109 0 43 chr20 21819553 21819691 -50334191 + FLAM_C SINE Alu 1 132 -11 742 261 93 65 chr20 21820858 21821256 -50332626 - MLT1I LTR MaLR 0 409 1 21 36 0 0 chr20 21822366 21822394 -50331488 + AT_rich Low_complexity Low_complexity 1 28 0 691 182 94 68 chr20 21822513 21822705 -50331177 - MER3 DNA MER1_type -3 206 10 692 257 78 80 chr20 21823855 21824303 -50329579 - MLT1H LTR MaLR -4 545 99 580 224 100 0 chr20 21825285 21825455 -50328427 - MIR SINE MIR 0 262 76 1133 22 29 0 chr20 21825539 21825676 -50328206 + L1PA4 LINE L1 6015 6155 0 22 35 0 0 chr20 21825726 21825755 -50328127 + AT_rich Low_complexity Low_complexity 1 29 0 603 233 94 90 chr20 21825852 21825887 -50327995 - MLT1F LTR MaLR 0 555 522 1806 130 130 33 chr20 21825887 21826218 -50327664 - THE1B LTR MaLR 0 364 2 603 233 94 90 chr20 21826218 21826467 -50327415 - MLT1F LTR MaLR -33 522 270 549 211 18 0 chr20 21826467 21826576 -50327306 + MER54A LTR ERVL 1 111 -790 1425 172 52 99 chr20 21826576 21826959 -50326923 - MLT1A1 LTR MaLR 0 365 1 3760 191 18 3 chr20 21826984 21827607 -50326275 - MLT1A1-int LTR MaLR -12 1723 1092 180 0 0 0 chr20 21827633 21827653 -50326229 + (TTAGGG)n Simple_repeat Simple_repeat 4 23 0 47 61 0 0 chr20 21828604 21828686 -50325196 + AT_rich Low_complexity Low_complexity 1 82 0 361 332 106 0 chr20 21828843 21829060 -50324822 - MIR SINE MIR -1 261 22 272 219 0 0 chr20 21829133 21829197 -50324685 - AluJ/monomer SINE Alu 0 302 239 949 121 0 0 chr20 21829203 21829327 -50324555 - FLAM_C SINE Alu -19 124 1 278 356 124 10 chr20 21829776 21829978 -50323904 - MIR SINE MIR -31 231 7 395 352 6 0 chr20 21830899 21831075 -50322807 + (CA)n Simple_repeat Simple_repeat 2 178 0 432 180 94 39 chr20 21833248 21833376 -50320506 - L1ME4a LINE L1 -258 5863 5729 519 306 61 53 chr20 21833432 21833665 -50320217 + L3 LINE CR1 1165 1406 -171 1978 88 0 0 chr20 21833665 21833961 -50319921 + AluY SINE Alu 39 334 0 519 306 61 53 chr20 21833961 21834101 -50319781 + L3 LINE CR1 1406 1543 -34 23 0 0 0 chr20 21834406 21834429 -50319453 + AT_rich Low_complexity Low_complexity 1 23 0 1311 241 12 25 chr20 21834623 21834943 -50318939 - LTR16C LTR ERVL -1 490 175 904 222 69 9 chr20 21836071 21836287 -50317595 - LTR16C LTR ERVL -10 481 253 314 337 116 6 chr20 21836495 21836676 -50317206 + MIR SINE MIR 56 256 -6 973 236 43 111 chr20 21837374 21837933 -50315949 + MLT1H LTR MaLR 29 549 0 237 281 47 0 chr20 21838008 21838072 -50315810 + MER5A DNA MER1_type 72 138 -51 295 250 55 23 chr20 21838072 21838179 -50315703 + MER5A DNA MER1_type 45 165 -24 222 62 0 0 chr20 21838205 21838237 -50315645 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 181 245 142 66 chr20 21838276 21838382 -50315500 + L2 LINE L2 3192 3305 -8 209 317 109 20 chr20 21839523 21839624 -50314258 - L2 LINE L2 -7 3265 3156 1052 92 0 6 chr20 21840106 21840270 -50313612 + (TGGA)n Simple_repeat Simple_repeat 4 166 0 2908 177 78 19 chr20 21841130 21841746 -50312136 + MLT1E1 LTR MaLR 3 654 0 807 291 42 4 chr20 21841958 21842195 -50311687 + MIR SINE MIR 17 262 0 289 323 11 11 chr20 21842192 21842285 -50311597 - MIR SINE MIR -154 108 16 * 307 242 30 30 chr20 21842433 21842565 -50311317 + LTR16A1 LTR ERVL 320 451 -6 185 250 0 0 chr20 21843073 21843113 -50310769 + MIR SINE MIR 100 139 -69 555 296 56 0 chr20 21843768 21843947 -50309935 - MIR SINE MIR -8 254 66 454 306 123 33 chr20 21843974 21844340 -50309542 + L2 LINE L2 2371 2769 -545 403 286 48 42 chr20 21844491 21844680 -50309202 + L2 LINE L2 3122 3311 -2 210 171 0 0 chr20 21845171 21845206 -50308676 + A-rich Low_complexity Low_complexity 1 35 0 1948 117 3 50 chr20 21845835 21846134 -50307748 + AluSp SINE Alu 1 285 -28 1566 206 20 0 chr20 21846181 21846473 -50307409 + AluJo SINE Alu 1 298 -14 955 203 66 14 chr20 21846533 21846745 -50307137 + MER58A DNA MER1_type 2 224 0 250 385 82 0 chr20 21846818 21846953 -50306929 + MIR3 SINE MIR 52 197 -11 841 302 125 20 chr20 21847166 21847573 -50306309 - LTR16C LTR ERVL 0 491 42 466 222 76 29 chr20 21847625 21847796 -50306086 - Charlie7 DNA MER1_type 0 2612 2434 2181 140 46 96 chr20 21847811 21848332 -50305550 + L1MB3 LINE L1 5686 6180 -3 234 288 0 0 chr20 21848373 21848446 -50305436 - Charlie7 DNA MER1_type -2535 77 5 283 287 37 59 chr20 21848594 21848730 -50305152 + MIR SINE MIR 28 160 -102 2187 193 62 33 chr20 21848786 21849305 -50304577 - MLT1F LTR MaLR 0 542 9 615 288 90 65 chr20 21849315 21849925 -50303957 - L2 LINE L2 -76 3237 2595 436 179 86 14 chr20 21850606 21850746 -50303136 + MER113 DNA MER1_type? 67 216 -305 1771 254 63 29 chr20 21851301 21851947 -50301935 + L1ME2 LINE L1 5497 6164 0 517 285 47 27 chr20 21852492 21852748 -50301134 - L1ME LINE L1 -329 5792 5532 1079 187 9 41 chr20 21853209 21853428 -50300454 + AluJo SINE Alu 101 312 0 582 53 9 53 chr20 21853436 21853549 -50300333 + (GGAA)n Simple_repeat Simple_repeat 4 111 0 1448 224 114 11 chr20 21854004 21854459 -50299423 - L1ME1 LINE L1 -19 6147 5646 880 219 52 64 chr20 21854937 21855325 -50298557 - Tigger8 DNA MER2_type -62 604 222 703 189 0 0 chr20 21855546 21855657 -50298225 + FLAM_A SINE Alu 1 111 -31 210 331 26 26 chr20 21856038 21856192 -50297690 - L2 LINE L2 -2557 757 604 428 305 33 12 chr20 21856997 21857175 -50296707 + MIR SINE MIR 17 197 -61 1345 148 5 28 chr20 21858148 21858364 -50295518 - AluJo SINE Alu -16 296 86 2338 90 0 0 chr20 21859016 21859306 -50294576 - AluSg1 SINE Alu -19 290 1 1902 151 33 30 chr20 21859772 21860076 -50293806 + AluJo SINE Alu 1 305 -7 530 214 20 0 chr20 21860080 21860178 -50293704 - MER5A DNA MER1_type -87 102 3 27 29 0 0 chr20 21860538 21860572 -50293310 + AT_rich Low_complexity Low_complexity 1 34 0 2469 50 7 3 chr20 21860615 21860914 -50292968 + AluY SINE Alu 1 300 -11 2602 143 38 2 chr20 21860934 21861411 -50292471 + L1MB3 LINE L1 5687 6180 -3 2047 200 167 22 chr20 21861431 21862097 -50291785 - L1MC4a LINE L1 -53 7755 6994 1980 143 20 7 chr20 21862208 21862509 -50291373 + AluSq SINE Alu 1 305 -8 23 33 0 0 chr20 21862640 21862670 -50291212 + AT_rich Low_complexity Low_complexity 1 30 0 2170 237 42 19 chr20 21863060 21863637 -50290245 - MLT1G LTR MaLR 0 590 1 720 260 135 5 chr20 21863857 21864049 -50289833 - MIR SINE MIR -33 229 13 376 313 52 0 chr20 21864072 21864187 -50289695 + L2 LINE L2 3121 3241 -31 266 285 61 30 chr20 21864425 21864590 -50289292 + L1ME LINE L1 5555 5724 -2084 * 5927 219 41 19 chr20 21864576 21866735 -50287147 - L1MB7 LINE L1 0 6682 4452 2426 81 0 0 chr20 21866735 21867031 -50286851 - AluY SINE Alu -15 296 1 5927 219 41 19 chr20 21867031 21867524 -50286358 - L1MB7 LINE L1 -2230 4452 3972 1185 172 26 99 chr20 21867524 21867988 -50285894 - L1MB7 LINE L1 -5164 1378 949 3344 67 9 0 chr20 21868017 21868452 -50285430 - L1PA7 LINE L1 -1 6153 5715 2973 78 16 2 chr20 21868452 21868875 -50285007 + L1PA7 LINE L1 5275 5703 -451 3053 256 31 34 chr20 21868881 21869825 -50284057 - L1MB7 LINE L1 -5585 957 17 334 227 17 34 chr20 21869849 21869968 -50283914 + L1ME LINE L1 5703 5819 -302 698 87 10 0 chr20 21869980 21870083 -50283799 + L1PA14 LINE L1 6057 6160 -1 324 0 0 0 chr20 21870152 21870188 -50283694 + (TG)n Simple_repeat Simple_repeat 2 37 0 36 40 0 0 chr20 21870383 21870433 -50283449 + AT_rich Low_complexity Low_complexity 1 50 0 360 285 62 21 chr20 21870788 21870932 -50282950 - MIR3 SINE MIR -54 154 5 23 0 0 0 chr20 21875616 21875639 -50278243 + AT_rich Low_complexity Low_complexity 1 23 0 25 31 0 0 chr20 21876164 21876196 -50277686 + AT_rich Low_complexity Low_complexity 1 32 0 2030 130 0 0 chr20 21876242 21876526 -50277356 - AluSx SINE Alu 0 312 29 260 257 30 30 chr20 21877236 21877337 -50276545 - MIR SINE MIR -66 142 42 612 300 96 18 chr20 21877980 21878369 -50275513 - LTR16A LTR ERVL -9 441 1 275 104 21 0 chr20 21879419 21879467 -50274415 + (TA)n Simple_repeat Simple_repeat 2 50 0 2207 283 60 32 chr20 21879559 21880800 -50273082 - L2 LINE L2 -3 3310 2035 358 323 61 26 chr20 21882219 21882384 -50271498 + MIR3 SINE MIR 32 208 0 202 324 28 56 chr20 21882361 21882469 -50271413 - MIR SINE MIR -84 124 20 * 427 313 30 22 chr20 21883002 21883232 -50270650 - Charlie8 DNA MER1_type -2152 265 34 1139 284 200 46 chr20 21883255 21884085 -50269797 - L3 LINE CR1 -56 1521 564 191 239 56 42 chr20 21884659 21884730 -50269152 + MIR SINE MIR 66 137 -125 405 328 40 58 chr20 21885086 21885485 -50268397 - MLT1I LTR MaLR -2 407 16 511 261 121 52 chr20 21885711 21886205 -50267677 + MLT1H1 LTR MaLR 42 553 -2 288 53 0 0 chr20 21886466 21886504 -50267378 + (TA)n Simple_repeat Simple_repeat 1 38 0 389 294 17 17 chr20 21886720 21886877 -50267005 + MIR SINE MIR 37 189 -64 382 291 76 57 chr20 21887210 21887420 -50266462 + MIR SINE MIR 3 216 -46 710 258 104 22 chr20 21887608 21887836 -50266046 - HAL1 LINE L1 -31 2476 2268 321 26 0 0 chr20 21887836 21887874 -50266008 + (CA)n Simple_repeat Simple_repeat 2 39 0 710 258 104 22 chr20 21887874 21888048 -50265834 - HAL1 LINE L1 -239 2268 2041 11188 20 0 0 chr20 21888056 21890114 -50263768 + L1PA4 LINE L1 4088 6145 -10 637 122 0 0 chr20 21890144 21890234 -50263648 + FLAM_C SINE Alu 22 111 -32 694 300 123 11 chr20 21890248 21890791 -50263091 - HAL1 LINE L1 -475 2032 1429 2100 73 69 0 chr20 21890922 21891197 -50262685 + AluSp SINE Alu 9 302 -11 30 0 0 0 chr20 21891296 21891326 -50262556 + AT_rich Low_complexity Low_complexity 1 30 0 352 289 38 44 chr20 21891540 21891699 -50262183 - L1MC4a LINE L1 -1878 5930 5773 290 188 16 0 chr20 21891745 21891809 -50262073 - L1MC4a LINE L1 -440 5681 5617 251 228 0 0 chr20 21893519 21893576 -50260306 + (TA)n Simple_repeat Simple_repeat 1 57 0 213 94 0 0 chr20 21893624 21893656 -50260226 + (CA)n Simple_repeat Simple_repeat 1 32 0 280 214 10 10 chr20 21894551 21894649 -50259233 + (TAGA)n Simple_repeat Simple_repeat 1 98 0 2122 176 19 77 chr20 21895883 21896029 -50257853 - LTR54 LTR ERV1 0 510 357 3111 156 4 20 chr20 21896029 21896569 -50257313 - LTR26B LTR ERV1 0 531 1 2122 176 19 77 chr20 21896569 21896956 -50256926 - LTR54 LTR ERV1 -153 357 8 2275 120 33 64 chr20 21898221 21898645 -50255237 - MLT2D LTR ERVL -3 411 1 333 47 0 0 chr20 21898812 21898855 -50255027 + (TG)n Simple_repeat Simple_repeat 2 44 0 2058 172 24 5 chr20 21899889 21900272 -50253610 + MLT1B LTR MaLR 1 390 0 695 188 56 0 chr20 21900760 21900904 -50252978 + L1MC1 LINE L1 6176 6327 -6 347 249 47 74 chr20 21901160 21901417 -50252465 - L1ME4a LINE L1 -295 5826 5577 253 208 57 47 chr20 21901448 21901568 -50252314 - L1P4 LINE L1 -700 5466 5346 241 203 47 78 chr20 21901593 21901657 -50252225 + L2 LINE L2 3209 3270 -2 383 293 47 20 chr20 21901829 21901979 -50251903 - MIR SINE MIR -26 236 83 1639 217 25 15 chr20 21902091 21902483 -50251399 - MSTD LTR MaLR 0 396 1 663 285 127 20 chr20 21902558 21902759 -50251123 - L1MC4a LINE L1 -1763 6028 5850 228 35 0 0 chr20 21902759 21902788 -50251094 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 663 285 127 20 chr20 21902788 21903035 -50250847 - L1MC4a LINE L1 -1941 5850 5532 839 243 31 28 chr20 21903074 21903329 -50250553 - MLT1J LTR MaLR -2 509 254 373 296 55 76 chr20 21903969 21904216 -50249666 - L1MC4a LINE L1 -1542 4587 4347 2061 141 7 0 chr20 21904216 21904515 -50249367 - AluSx SINE Alu -11 301 1 373 296 55 76 chr20 21904515 21904611 -50249271 - L1MC4a LINE L1 -1782 4347 4251 241 286 48 0 chr20 21904719 21904824 -50249058 - L1P LINE L1 -1989 4157 4048 494 366 71 30 chr20 21904839 21905476 -50248406 - L1MC4a LINE L1 -2127 4002 3340 2623 32 0 6 chr20 21905484 21905796 -50248086 - AluY SINE Alu -1 310 1 641 292 149 53 chr20 21905892 21906382 -50247500 - HAL1 LINE L1 -875 1632 1096 288 0 0 0 chr20 21906604 21906636 -50247246 + (CA)n Simple_repeat Simple_repeat 2 33 0 206 206 44 44 chr20 21906710 21906778 -50247104 - MIR SINE MIR -191 71 4 349 90 30 0 chr20 21906866 21906933 -50246949 + (TTTA)n Simple_repeat Simple_repeat 4 72 0 1693 152 43 20 chr20 21906943 21907246 -50246636 - AluJo SINE Alu -2 310 1 25 31 0 0 chr20 21908089 21908121 -50245761 + AT_rich Low_complexity Low_complexity 1 32 0 363 289 89 34 chr20 21908503 21908738 -50245144 - L2 LINE L2 -343 2971 2724 408 346 50 21 chr20 21909082 21909334 -50244548 - L1MEc LINE L1 -3732 2397 2161 985 162 11 16 chr20 21909735 21909926 -50243956 + MER20 DNA MER1_type 17 206 -13 334 373 63 20 chr20 21910724 21910976 -50242906 - L1M4 LINE L1 -1311 4835 4573 308 337 92 25 chr20 21910995 21911158 -50242724 - L1MEc LINE L1 -5002 1117 944 41 17 0 17 chr20 21913010 21913041 -50240841 + AT_rich Low_complexity Low_complexity 1 32 -26 2077 121 3 0 chr20 21913041 21913323 -50240559 + AluSg SINE Alu 1 283 -27 41 17 0 17 chr20 21913323 21913350 -50240532 + AT_rich Low_complexity Low_complexity 32 58 0 325 378 32 16 chr20 21913808 21913993 -50239889 - HAL1 LINE L1 -742 1765 1578 185 65 32 0 chr20 21914560 21914591 -50239291 + (TA)n Simple_repeat Simple_repeat 2 33 0 283 142 71 12 chr20 21914637 21914806 -50239076 + (TA)n Simple_repeat Simple_repeat 1 179 0 439 38 119 6 chr20 21914828 21914976 -50238906 + (TA)n Simple_repeat Simple_repeat 2 171 -8 2008 136 0 10 chr20 21914976 21915270 -50238612 - AluSx SINE Alu -21 291 1 439 38 119 6 chr20 21915270 21915281 -50238601 + (TA)n Simple_repeat Simple_repeat 171 179 0 185 65 32 0 chr20 21915339 21915370 -50238512 + (TA)n Simple_repeat Simple_repeat 2 33 0 582 245 72 10 chr20 21915421 21915610 -50238272 + MIR SINE MIR 60 259 -3 257 223 43 53 chr20 21915632 21915726 -50238156 + L2 LINE L2 3221 3313 0 363 287 104 0 chr20 21916059 21916174 -50237708 + MIR SINE MIR 29 155 -107 444 221 74 40 chr20 21916884 21917033 -50236849 + MIR SINE MIR 39 192 -70 244 232 11 95 chr20 21917098 21917193 -50236689 + L2 LINE L2 3186 3272 0 365 246 115 52 chr20 21919003 21919194 -50234688 - L2 LINE L2 -4 3309 3107 1588 132 34 8 chr20 21919196 21919462 -50234420 - MSTA LTR MaLR -2 426 154 1540 137 4 8 chr20 21919462 21919717 -50234165 - MSTA LTR MaLR -174 254 1 585 300 72 45 chr20 21919727 21919950 -50233932 - L2 LINE L2 -222 3091 2863 1892 225 65 45 chr20 21919959 21920497 -50233385 - MLT1H LTR MaLR 0 549 1 473 87 0 0 chr20 21920858 21920927 -50232955 - MSTA LTR MaLR 0 428 360 2119 135 7 0 chr20 21920927 21921321 -50232561 + AluSx SINE Alu 2 397 0 1241 151 34 21 chr20 21921328 21921566 -50232316 - MSTA LTR MaLR -58 370 130 190 426 41 0 chr20 21921985 21922107 -50231775 + L2 LINE L2 3136 3262 -10 2102 93 0 43 chr20 21922108 21922409 -50231473 + AluSg1 SINE Alu 9 296 -13 184 211 26 0 chr20 21923045 21923083 -50230799 - MIR SINE MIR -138 70 32 1295 187 3 16 chr20 21924391 21924696 -50229186 - MER33 DNA MER1_type -4 320 20 267 298 12 0 chr20 21926317 21926401 -50227481 + L3b LINE CR1 1333 1417 -166 572 211 63 0 chr20 21927830 21927972 -50225910 + LTR16C LTR ERVL 331 481 -10 591 271 59 73 chr20 21930603 21931027 -50222855 - MLT1H LTR MaLR -3 546 129 842 253 73 13 chr20 21931872 21932173 -50221709 - LTR16C LTR ERVL -76 415 97 370 316 83 0 chr20 21932572 21932705 -50221177 + MIR SINE MIR 37 180 -82 883 179 31 2 chr20 21933496 21933755 -50220127 - MER110 LTR ERV1 -21 470 159 2133 118 45 24 chr20 21933755 21933907 -50219975 + MLT1B LTR MaLR 1 148 -242 1435 166 19 152 chr20 21933907 21934245 -50219637 - MLT1A1 LTR MaLR 0 365 -16 216 0 0 0 chr20 21934245 21934269 -50219613 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2139 113 3 3 chr20 21934271 21934555 -50219327 - AluSx SINE Alu -28 284 1 1435 166 19 152 chr20 21934555 21934634 -50219248 - MLT1A1 LTR MaLR -276 89 1 2133 118 45 24 chr20 21934634 21934863 -50219019 + MLT1B LTR MaLR 148 390 0 302 189 95 14 chr20 21934894 21934968 -50218914 - MIR SINE MIR -142 120 41 1216 258 48 15 chr20 21935230 21935560 -50218322 + LTR16C LTR ERVL 37 377 -114 292 204 80 35 chr20 21935791 21935904 -50217978 - LTR67 LTR ERVL -8 549 432 388 313 15 8 chr20 21936542 21936676 -50217206 + L2 LINE L2 3179 3313 0 230 153 0 125 chr20 21936949 21937021 -50216861 - MLT1H LTR MaLR -4 545 483 297 299 20 45 chr20 21937327 21937528 -50216354 - MLT1H LTR MaLR -259 290 95 1613 167 36 0 chr20 21937693 21938022 -50215860 + L1MC3 LINE L1 7430 7770 -15 316 243 47 6 chr20 21939709 21939878 -50214004 + (TA)n Simple_repeat Simple_repeat 2 177 0 372 318 16 23 chr20 21940045 21940174 -50213708 - MIR3 SINE MIR -21 187 60 31 0 0 0 chr20 21940448 21940479 -50213403 + AT_rich Low_complexity Low_complexity 1 31 0 1426 155 47 25 chr20 21941322 21941639 -50212243 - MER33 DNA MER1_type 0 324 1 2080 82 0 82 chr20 21941702 21942049 -50211833 + AluSg SINE Alu 1 289 -21 298 263 122 78 chr20 21942194 21942399 -50211483 - MLT1L LTR MaLR -207 408 195 226 268 31 72 chr20 21942736 21942833 -50211049 - MIR SINE MIR -150 112 20 426 258 42 83 chr20 21943373 21943590 -50210292 - MIR SINE MIR 0 262 55 955 216 32 11 chr20 21943927 21944112 -50209770 + MER5A DNA MER1_type 1 189 0 1563 183 63 45 chr20 21944341 21944723 -50209159 + L1MC4 LINE L1 7654 8042 0 571 204 275 0 chr20 21945089 21945256 -50208626 + MIR SINE MIR 40 252 -10 234 0 0 0 chr20 21945301 21945327 -50208555 + (TA)n Simple_repeat Simple_repeat 2 27 0 403 236 22 0 chr20 21945380 21945469 -50208413 - MIR3 SINE MIR -46 162 72 319 277 0 12 chr20 21946341 21946424 -50207458 + MIR SINE MIR 69 150 -112 583 240 149 57 chr20 21946424 21946807 -50207075 - MLT1F LTR MaLR -2 540 123 315 0 0 0 chr20 21946818 21946853 -50207029 + (TG)n Simple_repeat Simple_repeat 2 36 0 3147 102 25 2 chr20 21946890 21947248 -50206634 - L1PB1 LINE L1 0 6151 5780 324 0 0 0 chr20 21947248 21947284 -50206598 + (TG)n Simple_repeat Simple_repeat 2 37 0 3147 102 25 2 chr20 21947284 21947364 -50206518 - L1PB1 LINE L1 -371 5780 5703 460 290 29 22 chr20 21947367 21947505 -50206377 - MLT1F LTR MaLR -451 139 1 1634 167 20 31 chr20 21949040 21949333 -50204549 + AluJb SINE Alu 7 296 -16 494 133 0 0 chr20 21949578 21949661 -50204221 - AluS SINE Alu -3 309 227 878 185 11 11 chr20 21999844 22000028 -50153854 - MER53 DNA DNA -5 184 1 763 208 158 67 chr20 22000338 22000756 -50153126 - LTR16A1 LTR ERVL 0 457 2 1931 173 70 70 chr20 22001681 22001855 -50152027 + L1MB2 LINE L1 5640 5812 -359 1686 143 37 37 chr20 22001855 22002149 -50151733 + AluJo SINE Alu 1 294 -18 1931 173 70 70 chr20 22002149 22002440 -50151442 + L1MB2 LINE L1 5812 6124 -47 1919 143 0 14 chr20 22002440 22002757 -50151125 + AluJo SINE Alu 3 315 0 1931 173 70 70 chr20 22002757 22002804 -50151078 + L1MB2 LINE L1 6124 6169 -2 2154 113 36 10 chr20 22002815 22003117 -50150765 + AluSx SINE Alu 3 312 0 1208 232 36 42 chr20 22003513 22003849 -50150033 - MER46C DNA MER2_type -4 334 1 250 286 157 43 chr20 22003899 22004039 -50149843 - MIR3 SINE MIR -29 179 24 244 227 0 61 chr20 22004244 22004310 -50149572 + L2 LINE L2 3211 3272 0 239 339 0 0 chr20 22004572 22004634 -50149248 + L2 LINE L2 3252 3313 0 755 274 48 34 chr20 22004656 22004948 -50148934 - MLT1K LTR MaLR -3 585 290 1232 158 81 5 chr20 22005221 22005430 -50148452 - AluJb SINE Alu -1 311 87 1793 149 80 3 chr20 22005473 22005761 -50148121 + AluSx SINE Alu 1 310 -2 748 134 0 25 chr20 22005788 22005907 -50147975 - FLAM_C SINE Alu -26 117 2 1886 109 109 7 chr20 22007088 22007364 -50146518 - AluSg SINE Alu -6 304 1 2281 113 0 22 chr20 22008001 22008319 -50145563 - AluSq SINE Alu 0 313 3 272 290 14 0 chr20 22008333 22008402 -50145480 + MIR3 SINE MIR 91 160 -48 27 0 0 0 chr20 22008566 22008593 -50145289 + AT_rich Low_complexity Low_complexity 1 27 0 755 238 18 6 chr20 22008858 22009026 -50144856 + MER5B DNA MER1_type 3 172 -6 2198 139 8 0 chr20 22009036 22009402 -50144480 + L1MB2 LINE L1 5555 5923 -260 1442 157 16 4 chr20 22009464 22009713 -50144169 + L1MB2 LINE L1 5915 6166 -5 416 227 167 27 chr20 22009762 22009912 -50143970 + MER5A DNA MER1_type 13 183 -6 550 272 138 28 chr20 22009964 22010247 -50143635 + MLT1L LTR MaLR 1 314 -301 2540 87 0 0 chr20 22010269 22010580 -50143302 - AluSx SINE Alu 0 312 2 242 317 10 10 chr20 22010659 22010760 -50143122 + MLT1L LTR MaLR 494 594 -21 1108 173 23 27 chr20 22010760 22010980 -50142902 - MER20 DNA MER1_type 0 219 1 286 303 0 9 chr20 22012377 22012486 -50141396 + MLT1L LTR MaLR 508 615 0 2354 108 0 0 chr20 22012602 22012907 -50140975 + AluSq SINE Alu 1 305 -8 1803 169 0 14 chr20 22015057 22015374 -50138508 - AluJb SINE Alu 0 312 4 523 273 1 46 chr20 22015412 22015643 -50138239 - L1ME3 LINE L1 0 6170 5949 803 212 86 31 chr20 22015706 22015928 -50137954 - L1ME1 LINE L1 -3 6163 5930 1594 150 75 14 chr20 22016622 22016916 -50136966 - AluJb SINE Alu 0 312 1 1131 177 39 12 chr20 22017735 22017989 -50135893 + Charlie5 DNA MER1_type 2364 2624 0 2072 140 3 0 chr20 22018344 22018637 -50135245 + AluSx SINE Alu 1 294 -18 613 322 53 16 chr20 22019001 22019246 -50134636 - MIR SINE MIR 0 262 9 2062 123 48 0 chr20 22019884 22020177 -50133705 + AluSx SINE Alu 1 307 -5 313 217 2 0 chr20 22020433 22020502 -50133380 - MER45 DNA AcHobo -4 1577 105 939 174 12 36 chr20 22020502 22020669 -50133213 + FRAM SINE Alu 4 166 0 2207 105 7 7 chr20 22020674 22020979 -50132903 + AluSc SINE Alu 1 305 -4 268 296 16 40 chr20 22020986 22021111 -50132771 - MER45 DNA AcHobo -1459 122 1 2102 108 38 0 chr20 22021257 22021545 -50132337 - AluSx SINE Alu -13 299 1 227 313 48 0 chr20 22022216 22022299 -50131583 + MIR SINE MIR 176 262 0 23 33 0 0 chr20 22022367 22022397 -50131485 + AT_rich Low_complexity Low_complexity 1 30 0 1154 147 50 46 chr20 22023474 22023692 -50130190 + MER20 DNA MER1_type 1 219 0 2204 113 27 0 chr20 22023698 22024031 -50129851 + AluSx SINE Alu 5 345 0 398 195 258 0 chr20 22024162 22024297 -50129585 + MER5A DNA MER1_type 5 180 -9 436 240 80 57 chr20 22024788 22024963 -50128919 - HAL1b LINE L1 -2 1346 1168 1918 176 158 24 chr20 22024997 22025497 -50128385 - MLT1F1 LTR MaLR 0 567 1 1228 231 67 3 chr20 22025498 22025797 -50128085 - L1ME1 LINE L1 -5 6161 5844 1004 268 96 33 chr20 22025892 22026287 -50127595 + LTR16C LTR ERVL 71 490 -1 542 219 122 87 chr20 22026288 22026496 -50127386 - HAL1b LINE L1 -240 1108 909 3245 67 64 5 chr20 22026496 22026915 -50126967 + MLT2A1 LTR ERVL 1 444 0 542 219 122 87 chr20 22026915 22027180 -50126702 - HAL1b LINE L1 -439 909 618 1112 280 64 21 chr20 22027187 22027576 -50126306 - MLT1I LTR MaLR -2 407 2 954 238 166 47 chr20 22028304 22028775 -50125107 + MLT1H LTR MaLR 23 549 0 420 246 106 55 chr20 22028852 22029042 -50124840 + MIR SINE MIR 2 204 -58 2477 109 0 0 chr20 22029042 22029354 -50124528 + AluSx SINE Alu 1 312 0 180 234 78 16 chr20 22029475 22029539 -50124343 - L3 LINE CR1 0 1577 1510 618 271 97 11 chr20 22030064 22030445 -50123437 - LTR16C LTR ERVL 0 491 64 279 291 106 26 chr20 22030509 22030660 -50123222 + MIR SINE MIR 26 188 -74 2890 171 34 22 chr20 22030719 22031308 -50122574 + L1MA4 LINE L1 5703 6298 -2 212 271 0 0 chr20 22031369 22031417 -50122465 - L2 LINE L2 -208 3064 3017 584 204 19 0 chr20 22031441 22031544 -50122338 + FLAM_C SINE Alu 2 106 -37 1092 231 97 84 chr20 22031924 22032449 -50121433 + MLT1H LTR MaLR 18 549 0 974 224 99 128 chr20 22033273 22033470 -50120412 - L2 LINE L2 -6 3307 3106 2182 118 3 0 chr20 22033470 22033767 -50120115 + AluSp SINE Alu 1 298 -15 974 224 99 128 chr20 22033767 22034386 -50119496 - L2 LINE L2 -207 3106 2462 517 252 0 15 chr20 22034415 22034546 -50119336 - L2 LINE L2 -1258 2056 1928 995 256 113 6 chr20 22034604 22034932 -50118950 - L2 LINE L2 -1669 1645 1283 573 30 50 20 chr20 22035013 22035114 -50118768 + (TAGA)n Simple_repeat Simple_repeat 1 104 0 305 298 63 19 chr20 22035153 22035311 -50118571 + L1ME4a LINE L1 5955 6119 -2 198 347 146 7 chr20 22035771 22035915 -50117967 + MIR3 SINE MIR 23 186 -22 2124 122 0 0 chr20 22035974 22036288 -50117594 + AluSg SINE Alu 1 314 0 1024 275 75 21 chr20 22036401 22036787 -50117095 - MLT1I LTR MaLR 0 409 3 230 390 62 105 chr20 22036945 22037072 -50116810 - L1ME4a LINE L1 -32 6089 5958 1788 172 32 9 chr20 22037072 22037415 -50116467 - L1MB7 LINE L1 -1 6183 5833 230 390 62 105 chr20 22037415 22037443 -50116439 - L1ME4a LINE L1 -163 5958 5930 2058 114 19 23 chr20 22037443 22037751 -50116131 + AluSx SINE Alu 1 307 -5 230 390 62 105 chr20 22037751 22037859 -50116023 - L1ME4a LINE L1 -191 5930 5819 2460 88 0 0 chr20 22037859 22038167 -50115715 - AluSx SINE Alu -4 308 1 230 390 62 105 chr20 22038167 22038434 -50115448 - L1ME4a LINE L1 -302 5819 5580 497 263 120 47 chr20 22038479 22038944 -50114938 + L2 LINE L2 2743 3308 -5 235 191 60 71 chr20 22039812 22039896 -50113986 - MARNA DNA Mariner -145 441 359 2025 248 133 5 chr20 22039975 22040612 -50113270 - L1ME3A LINE L1 -10 6160 5442 883 178 40 7 chr20 22040640 22040792 -50113090 - FRAM SINE Alu -16 160 4 2058 165 104 66 chr20 22040886 22041079 -50112803 - LTR36 LTR ERV1 0 611 427 1971 160 0 10 chr20 22041079 22041386 -50112496 + AluJb SINE Alu 1 304 -8 2058 165 104 66 chr20 22041386 22041781 -50112101 - LTR36 LTR ERV1 -184 427 1 608 294 156 36 chr20 22042359 22043039 -50110843 + L2 LINE L2 2448 3202 -111 315 287 78 47 chr20 22043395 22043524 -50110358 - L2 LINE L2 -23 3249 3117 1244 266 31 6 chr20 22043660 22044010 -50109872 + LTR16C LTR ERVL 133 491 0 531 249 159 5 chr20 22044044 22044245 -50109637 - Charlie8 DNA MER1_type -2152 265 34 590 276 93 1 chr20 22044574 22044760 -50109122 - MIR SINE MIR -28 234 33 249 336 39 19 chr20 22044758 22044862 -50109020 - L2 LINE L2 -484 2830 2725 * 779 329 120 24 chr20 22044942 22045526 -50108356 - L2 LINE L2 -883 2431 1792 216 0 0 0 chr20 22045670 22045694 -50108188 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 791 249 150 27 chr20 22046542 22046875 -50107007 + MLT1G LTR MaLR 217 590 0 575 306 169 21 chr20 22046875 22047544 -50106338 - L2 LINE L2 -27 3286 2450 1743 254 10 60 chr20 22047544 22047949 -50105933 - L1ME LINE L1 -5418 652 285 1984 140 65 0 chr20 22047949 22048242 -50105640 - AluSq SINE Alu -1 312 1 1743 254 10 60 chr20 22048242 22048439 -50105443 - L1ME LINE L1 -5785 285 80 * 4745 150 33 14 chr20 22048428 22049302 -50104580 - L1MD1 LINE L1 -14 6228 5338 270 0 0 0 chr20 22049558 22049588 -50104294 + (TC)n Simple_repeat Simple_repeat 2 31 0 406 286 244 13 chr20 22050410 22050718 -50103164 - MLT1J2 LTR MaLR -6 444 66 298 167 167 0 chr20 22050987 22051047 -50102835 + MER58A DNA MER1_type 7 76 -31 775 144 66 24 chr20 22051103 22051270 -50102612 - MER96B DNA MER1_type? -239 178 5 252 255 14 7 chr20 22051860 22052001 -50101881 + CT-rich Low_complexity Low_complexity 1 142 0 264 161 0 0 chr20 22052064 22052126 -50101756 + CT-rich Low_complexity Low_complexity 2 63 0 616 284 53 72 chr20 22052467 22052529 -50101353 + L1ME3A LINE L1 5603 5665 -505 2112 134 10 3 chr20 22052529 22052834 -50101048 + AluSg SINE Alu 1 307 -3 616 284 53 72 chr20 22052834 22052960 -50100922 + L1ME3A LINE L1 5665 5792 -378 2290 63 0 21 chr20 22052960 22053244 -50100638 + AluY SINE Alu 13 290 -21 616 284 53 72 chr20 22053244 22053578 -50100304 + L1ME3A LINE L1 5792 6116 -54 1542 125 73 31 chr20 22053591 22053878 -50100004 - MSTB1 LTR MaLR -133 299 1 434 306 71 20 chr20 22054580 22054835 -50099047 - MER115 DNA AcHobo -367 326 59 388 203 104 109 chr20 22054901 22055093 -50098789 - L2 LINE L2 -308 3005 2815 2061 234 21 41 chr20 22055120 22055727 -50098155 - L1ME3 LINE L1 -7 6155 5561 441 328 26 5 chr20 22055739 22055928 -50097954 - L2 LINE L2 -569 2745 2553 2041 133 0 3 chr20 22056231 22056525 -50097357 - AluSx SINE Alu -19 293 1 977 283 71 15 chr20 22056950 22057357 -50096525 - MLT1K LTR MaLR -1 587 158 38 0 0 0 chr20 22057460 22057498 -50096384 + AT_rich Low_complexity Low_complexity 1 38 0 23 0 0 0 chr20 22057519 22057542 -50096340 + AT_rich Low_complexity Low_complexity 1 23 0 399 209 12 0 chr20 22057763 22057849 -50096033 - MER117 DNA MER1_type -51 146 60 933 246 30 0 chr20 22058166 22058365 -50095517 + MER63A DNA MER1_type 4 208 -2 1996 151 0 0 chr20 22058746 22059054 -50094828 + AluSx SINE Alu 1 308 0 355 244 57 0 chr20 22059074 22059197 -50094685 - L1MC5 LINE L1 -108 7853 7724 1619 167 0 8 chr20 22059341 22059593 -50094289 - AluSx SINE Alu -13 299 50 1792 144 0 15 chr20 22059594 22059865 -50094017 + AluJo SINE Alu 45 311 -1 230 167 0 21 chr20 22059869 22059917 -50093965 + Charlie8 DNA MER1_type 87 133 -2284 458 291 52 6 chr20 22060008 22060180 -50093702 + LTR16C LTR ERVL 200 379 -112 194 197 49 66 chr20 22060824 22060885 -50092997 + L2 LINE L2 3246 3305 -8 380 223 10 0 chr20 22060934 22061037 -50092845 + CT-rich Low_complexity Low_complexity 1 104 0 551 248 152 33 chr20 22061062 22061364 -50092518 + L1MC4a LINE L1 5706 6043 -1765 665 253 90 80 chr20 22061711 22061880 -50092002 - L2 LINE L2 -1 3312 3146 2129 133 0 0 chr20 22061880 22062180 -50091702 + AluJb SINE Alu 1 300 -12 665 253 90 80 chr20 22062180 22062386 -50091496 - L2 LINE L2 -167 3146 2933 263 273 52 0 chr20 22062762 22062839 -50091043 - MER103 DNA DNA -83 83 3 869 251 127 35 chr20 22063292 22063631 -50090251 + L1ME3 LINE L1 5622 5991 -171 2234 78 0 0 chr20 22063767 22064038 -50089844 + AluSc SINE Alu 35 305 -4 373 308 83 60 chr20 22064134 22064778 -50089104 + L2 LINE L2 2554 3221 -51 841 244 54 27 chr20 22064867 22065125 -50088757 + LTR16C LTR ERVL 75 339 -152 698 197 48 71 chr20 22065125 22065222 -50088660 - LTR29 LTR ERV1 0 622 524 2056 132 36 7 chr20 22065222 22065525 -50088357 + AluSx SINE Alu 1 312 0 698 197 48 71 chr20 22065525 22065667 -50088215 - LTR29 LTR ERV1 -98 524 389 707 105 142 110 chr20 22065677 22065915 -50087967 - LTR29 LTR ERV1 -423 214 1 396 227 103 0 chr20 22065936 22066033 -50087849 + LTR16C LTR ERVL 368 474 -17 723 208 46 20 chr20 22067187 22067384 -50086498 + MER33 DNA MER1_type 30 231 -93 272 200 24 12 chr20 22067401 22067419 -50086463 + A-rich Low_complexity Low_complexity 5 21 -69 10750 51 47 8 chr20 22067419 22068750 -50085132 + SVA Other Other 3 1386 0 272 200 24 12 chr20 22068750 22068816 -50085066 + A-rich Low_complexity Low_complexity 21 90 0 22 0 0 0 chr20 22068894 22068916 -50084966 + AT_rich Low_complexity Low_complexity 1 22 0 204 49 49 49 chr20 22068919 22068960 -50084922 + (TAAAAA)n Simple_repeat Simple_repeat 1 41 0 1939 193 40 24 chr20 22068974 22069091 -50084791 + MLT1C LTR MaLR 3 117 -350 2666 118 41 14 chr20 22069091 22069508 -50084374 + MSTA LTR MaLR 1 428 0 1939 193 40 24 chr20 22069508 22069840 -50084042 + MLT1C LTR MaLR 117 459 -8 314 349 52 23 chr20 22069859 22070031 -50083851 - MIR SINE MIR -66 196 20 1406 141 168 32 chr20 22070033 22070373 -50083509 + LTR45B LTR ERV1 3 388 -101 1042 292 35 44 chr20 22070484 22070916 -50082966 - L2 LINE L2 0 3313 2886 230 275 14 43 chr20 22072036 22072105 -50081777 - MIR3 SINE MIR -49 159 93 1225 208 118 10 chr20 22072511 22072824 -50081058 + L1ME1 LINE L1 5816 6162 -4 380 119 0 17 chr20 22073154 22073213 -50080669 + MLT1G1 LTR MaLR 538 595 0 277 200 0 0 chr20 22073433 22073483 -50080399 + L2 LINE L2 3263 3312 -1 245 288 45 68 chr20 22073676 22073808 -50080074 - L2 LINE L2 -250 3063 2935 318 377 23 8 chr20 22073878 22074008 -50079874 + MIR SINE MIR 22 153 -55 865 264 20 0 chr20 22074024 22074221 -50079661 - MER63A DNA MER1_type -9 201 1 2060 150 40 0 chr20 22074345 22074645 -50079237 + AluSx SINE Alu 1 312 0 246 128 0 0 chr20 22074816 22074855 -50079027 + (CA)n Simple_repeat Simple_repeat 2 40 0 190 256 0 120 chr20 22075269 22075386 -50078496 + MIR SINE MIR 32 134 -74 368 329 150 21 chr20 22075940 22076226 -50077656 - LTR16C LTR ERVL 0 491 169 180 0 0 0 chr20 22076435 22076455 -50077427 + (CACCC)n Simple_repeat Simple_repeat 5 24 0 283 235 184 10 chr20 22076573 22076671 -50077211 + L2 LINE L2 3137 3251 -21 3368 176 43 61 chr20 22077024 22077822 -50076060 - L1MB5 LINE L1 -141 6033 5250 2284 80 19 32 chr20 22077822 22078133 -50075749 + AluY SINE Alu 1 307 -4 3368 176 43 61 chr20 22078133 22078457 -50075425 - L1MB5 LINE L1 -924 5250 4922 475 322 7 7 chr20 22078469 22078612 -50075270 - MIR SINE MIR -74 188 46 297 231 86 0 chr20 22078918 22079035 -50074847 + LTR16C LTR ERVL 362 488 -3 2253 111 0 3 chr20 22079932 22080229 -50073653 - AluSg SINE Alu -14 296 1 787 214 26 13 chr20 22080488 22080642 -50073240 - MER5B DNA MER1_type 0 178 23 469 145 7 179 chr20 22080649 22080794 -50073088 - MER5A DNA MER1_type 0 189 70 903 194 7 0 chr20 22080821 22080976 -50072906 - FRAM SINE Alu -23 153 1 428 265 33 62 chr20 22081284 22081495 -50072387 + L2 LINE L2 2581 2785 -529 292 314 57 0 chr20 22081559 22081664 -50072218 + LTR16B LTR ERVL 91 201 -263 323 296 21 7 chr20 22081916 22082024 -50071858 - LTR16A1 LTR ERVL -49 408 299 477 213 0 0 chr20 22082024 22082117 -50071765 + REP3 LTR ERV 1 93 -469 2073 144 161 7 chr20 22082117 22082547 -50071335 + MLT1D LTR MaLR 1 496 -9 1188 220 124 14 chr20 22082556 22082911 -50070971 + REP3 LTR ERV 89 482 -80 1153 179 5 28 chr20 22083914 22084132 -50069750 - MER58A DNA MER1_type -11 213 1 479 262 71 12 chr20 22084193 22084361 -50069521 + MER117 DNA MER1_type 1 178 -19 315 300 56 0 chr20 22084380 22084470 -50069412 - MIR3 SINE MIR -51 157 63 484 281 61 101 chr20 22085267 22085662 -50068220 + LTR16C LTR ERVL 83 461 -30 681 226 0 0 chr20 22085688 22085812 -50068070 - FLAM_A SINE Alu -5 128 5 545 222 161 24 chr20 22086176 22086424 -50067458 + MLT1K LTR MaLR 303 584 -4 232 196 22 0 chr20 22086629 22086675 -50067207 - LTR16C LTR ERVL 0 491 445 621 275 65 16 chr20 22086764 22087022 -50066860 - MLT1L LTR MaLR -19 596 246 1102 273 19 29 chr20 22087124 22087501 -50066381 + LTR16C LTR ERVL 103 475 -16 355 343 22 59 chr20 22087787 22088058 -50065824 + L3 LINE CR1 628 888 -689 336 137 6 2 chr20 22088072 22088337 -50065545 + AluSq SINE Alu 1 315 0 513 359 63 41 chr20 22088367 22088411 -50065471 + L3 LINE CR1 943 985 -592 1274 202 153 9 chr20 22088411 22088738 -50065144 + MLT1A2 LTR MaLR 1 374 0 513 359 63 41 chr20 22088738 22089055 -50064827 + L3 LINE CR1 985 1312 -265 543 291 122 0 chr20 22089068 22089264 -50064618 - LTR33A LTR ERVL 0 523 304 501 203 57 63 chr20 22089365 22089523 -50064359 - LTR33A LTR ERVL -361 162 6 597 229 23 57 chr20 22090675 22090850 -50063032 + MER5B DNA MER1_type 1 169 -9 733 271 108 55 chr20 22090850 22091359 -50062523 + MLT1F LTR MaLR 1 536 -6 24 0 0 0 chr20 22091587 22091611 -50062271 + AT_rich Low_complexity Low_complexity 1 24 0 259 333 36 14 chr20 22091686 22091824 -50062058 - MIR3 SINE MIR -65 143 3 414 0 0 0 chr20 22091835 22091881 -50062001 + (CA)n Simple_repeat Simple_repeat 2 47 0 805 257 122 75 chr20 22091889 22092341 -50061541 + MLT1J LTR MaLR 1 473 -38 258 167 17 17 chr20 22092979 22093039 -50060843 + MLT1I LTR MaLR 325 384 -25 389 283 187 27 chr20 22093048 22093348 -50060534 + L2 LINE L2 2408 2755 -559 3847 153 34 34 chr20 22093584 22093657 -50060225 + L1MA7 LINE L1 5535 5607 -684 2335 72 0 26 chr20 22093657 22093963 -50059919 + AluY SINE Alu 1 298 -13 3847 153 34 34 chr20 22093963 22094399 -50059483 + L1MA7 LINE L1 5607 6047 -244 2389 65 3 0 chr20 22094399 22094708 -50059174 - AluY SINE Alu -1 310 1 3847 153 34 34 chr20 22094708 22094953 -50058929 + L1MA7 LINE L1 6046 6290 -1 1658 154 10 13 chr20 22094970 22095268 -50058614 + AluJo SINE Alu 1 297 -15 233 276 35 0 chr20 22095285 22095343 -50058539 + L2 LINE L2 3117 3176 -96 228 308 8 26 chr20 22095492 22095609 -50058273 + GA-rich Low_complexity Low_complexity 3 117 0 1049 192 70 96 chr20 22096278 22096621 -50057261 - MER58B DNA MER1_type -3 338 5 233 279 33 0 chr20 22096639 22096700 -50057182 + MER5C DNA MER1_type 62 124 -200 258 197 76 15 chr20 22096802 22096868 -50057014 + MER5C DNA MER1_type 252 321 -3 195 255 160 43 chr20 22097165 22097259 -50056623 - L3b LINE CR1 -121 1462 1358 315 312 46 9 chr20 22097607 22097716 -50056166 + MIR SINE MIR 34 146 -62 599 208 197 22 chr20 22098077 22098255 -50055627 - MER3 DNA MER1_type 0 209 1 374 232 12 12 chr20 22099305 22099387 -50054495 + LTR16C LTR ERVL 399 480 -11 2214 210 47 34 chr20 22100815 22101372 -50052510 - L1MD3 LINE L1 -10 7985 7422 513 174 80 14 chr20 22101366 22101504 -50052378 - L1ME2 LINE L1 -239 5925 5779 * 814 242 58 54 chr20 22101757 22101960 -50051922 + MIR SINE MIR 2 208 -54 2187 107 3 0 chr20 22101960 22102258 -50051624 + AluSx SINE Alu 1 299 -13 814 242 58 54 chr20 22102258 22102314 -50051568 + MIR SINE MIR 208 262 0 2132 99 3 0 chr20 22102333 22102640 -50051242 + AluSp SINE Alu 1 308 0 1485 127 15 50 chr20 22102844 22102879 -50051003 - MLT2D LTR ERVL -2 412 377 323 78 20 0 chr20 22102879 22102930 -50050952 + (TG)n Simple_repeat Simple_repeat 1 52 0 1485 127 15 50 chr20 22102930 22103229 -50050653 - MLT2D LTR ERVL -37 377 1 338 324 48 0 chr20 22103445 22103590 -50050292 - Charlie8 DNA MER1_type -2261 156 5 768 207 56 0 chr20 22103725 22103904 -50049978 - MER5A DNA MER1_type 0 189 1 725 99 0 92 chr20 22104184 22104267 -50049615 + L1MB4 LINE L1 6060 6128 -52 1552 146 91 11 chr20 22104267 22104542 -50049340 + AluJb SINE Alu 1 297 -15 725 99 0 92 chr20 22104542 22104589 -50049293 + L1MB4 LINE L1 6128 6178 -2 244 213 160 27 chr20 22104687 22104762 -50049120 - MIR3 SINE MIR -16 192 108 1108 228 132 59 chr20 22104855 22105316 -50048566 + MLT1D LTR MaLR 8 502 -3 1013 114 108 0 chr20 22106963 22107121 -50046761 - FRAM SINE Alu -5 171 1 1951 293 59 28 chr20 22107268 22107729 -50046153 - MER115 DNA AcHobo -24 669 181 1708 177 0 13 chr20 22107729 22108034 -50045848 + AluJo SINE Alu 1 301 -11 1951 293 59 28 chr20 22108034 22108221 -50045661 - MER115 DNA AcHobo -512 181 1 590 264 6 31 chr20 22108221 22108244 -50045638 + MIR SINE MIR 83 105 -157 1515 164 117 33 chr20 22108244 22108604 -50045278 - MLT1B LTR MaLR 0 390 1 590 264 6 31 chr20 22108604 22108739 -50045143 + MIR SINE MIR 105 237 -25 2018 270 42 13 chr20 22108749 22109275 -50044607 - MLT1H1 LTR MaLR -14 541 1 646 280 93 0 chr20 22109621 22109803 -50044079 + MER63A DNA MER1_type 1 199 -11 240 299 131 0 chr20 22109883 22109982 -50043900 - L2 LINE L2 -236 3036 2921 2392 84 0 0 chr20 22109982 22110292 -50043590 + AluY SINE Alu 1 310 -1 1689 132 7 4 chr20 22110417 22110689 -50043193 + AluSx SINE Alu 1 273 -39 2191 152 70 0 chr20 22110769 22111138 -50042744 - MER57A LTR ERV1 -1 402 8 192 94 31 0 chr20 22111163 22111195 -50042687 - L2 LINE L2 -569 2745 2713 323 266 113 8 chr20 22111774 22111898 -50041984 - MIR SINE MIR -70 192 56 218 246 87 14 chr20 22112702 22112771 -50041111 + MIR SINE MIR 51 124 -84 395 207 111 30 chr20 22112863 22112998 -50040884 + L1MC4 LINE L1 7456 7601 -441 671 221 62 84 chr20 22113059 22113381 -50040501 + L1MC4 LINE L1 7728 8042 0 400 190 51 0 chr20 22113477 22113556 -50040326 - L2 LINE L2 -2 3311 3229 571 237 120 23 chr20 22113675 22113953 -50039929 + LTR16A LTR ERVL 91 437 -13 497 243 53 46 chr20 22113963 22114311 -50039571 - LTR33 LTR ERVL -9 512 106 303 333 8 50 chr20 22114560 22114680 -50039202 + HAL1b LINE L1 816 930 -418 310 286 48 62 chr20 22114709 22114919 -50038963 + HAL1 LINE L1 2245 2451 -56 222 37 0 0 chr20 22114950 22114977 -50038905 + (CA)n Simple_repeat Simple_repeat 2 28 0 1033 281 146 13 chr20 22115149 22115608 -50038274 - MLT1G1 LTR MaLR 0 595 76 35 0 0 0 chr20 22115864 22115899 -50037983 + AT_rich Low_complexity Low_complexity 1 35 0 425 274 44 18 chr20 22116086 22116199 -50037683 + MER91C DNA MER1_type 25 140 0 573 197 197 7 chr20 22116263 22116410 -50037472 + MER5B DNA MER1_type 1 175 -3 296 310 231 20 chr20 22117361 22117664 -50036218 - L2 LINE L2 0 3272 2906 1682 167 7 7 chr20 22118000 22118287 -50035595 + AluJo SINE Alu 2 288 -24 1758 163 147 3 chr20 22118354 22118728 -50035154 + MSTC LTR MaLR 1 428 0 429 326 94 20 chr20 22118728 22119120 -50034762 + L1MC4 LINE L1 7480 7900 -142 1721 173 10 0 chr20 22119126 22119427 -50034455 + AluJo SINE Alu 1 304 -8 188 173 27 40 chr20 22119476 22119551 -50034331 + GA-rich Low_complexity Low_complexity 4 77 0 238 211 228 9 chr20 22119572 22119686 -50034196 + L1MC4 LINE L1 7904 8042 0 248 302 103 17 chr20 22120610 22120726 -50033156 + MIR SINE MIR 20 145 -117 356 135 0 0 chr20 22121130 22121182 -50032700 + Tigger3b DNA MER2_type 41 92 -1139 645 143 0 0 chr20 22121182 22121280 -50032602 + AluJb SINE Alu 204 301 -11 7026 115 41 14 chr20 22121280 22122394 -50031488 + Tigger3b DNA MER2_type 88 1231 0 2145 122 0 0 chr20 22122478 22122781 -50031101 + AluSx SINE Alu 1 303 -9 357 325 0 0 chr20 22122794 22122920 -50030962 + L1P LINE L1 4918 5043 -1103 33 25 0 0 chr20 22122992 22123032 -50030850 + AT_rich Low_complexity Low_complexity 1 40 0 1115 271 98 41 chr20 22123112 22123207 -50030675 + L1MC4a LINE L1 5254 5342 -2466 2131 98 7 0 chr20 22123207 22123502 -50030380 - AluSx SINE Alu -15 297 1 1115 271 98 41 chr20 22123502 22123988 -50029894 + L1MC4a LINE L1 5342 5868 -1940 570 239 66 90 chr20 22125846 22126241 -50027641 - Charlie8 DNA MER1_type -2210 207 3 2110 117 10 3 chr20 22126494 22126801 -50027081 - AluSx SINE Alu -3 309 1 265 209 36 82 chr20 22126963 22127033 -50026849 - MIR SINE MIR -48 214 149 2148 105 0 3 chr20 22127033 22127329 -50026553 - AluSg SINE Alu -15 295 1 265 209 36 82 chr20 22127329 22127368 -50026514 - MIR SINE MIR -113 149 110 612 266 43 60 chr20 22127477 22127778 -50026104 + LTR16A1 LTR ERVL 159 454 -3 1816 112 11 28 chr20 22128368 22128655 -50025227 + AluSx SINE Alu 16 297 -15 5527 244 45 10 chr20 22128662 22128753 -50025129 - L1M4 LINE L1 -2047 4099 4013 1409 210 44 46 chr20 22128753 22129119 -50024763 - MLT1A1 LTR MaLR 0 365 1 5527 244 45 10 chr20 22129119 22130783 -50023099 - L1M4 LINE L1 -2133 4013 2282 944 242 59 59 chr20 22130784 22130939 -50022943 - Tigger1 DNA MER2_type 0 2418 2264 2436 86 0 0 chr20 22130939 22131252 -50022630 + AluSq SINE Alu 1 313 0 944 242 59 59 chr20 22131252 22131484 -50022398 - Tigger1 DNA MER2_type -153 2265 2031 2643 10 0 0 chr20 22131625 22131923 -50021959 + AluY SINE Alu 1 298 -13 1828 159 56 75 chr20 22131923 22132329 -50021553 + L1MC1 LINE L1 137 536 -5890 * 5177 177 49 48 chr20 22132324 22132924 -50020958 + L1MC1 LINE L1 1178 1776 -4650 1799 154 0 10 chr20 22132924 22133223 -50020659 - AluSx SINE Alu -6 306 11 5177 177 49 48 chr20 22133223 22133339 -50020543 + L1MC1 LINE L1 1776 1890 -4536 2104 105 3 7 chr20 22133339 22133643 -50020239 - AluSx SINE Alu -9 303 1 5177 177 49 48 chr20 22133643 22133834 -50020048 + L1MC1 LINE L1 1890 2079 -4347 1917 131 3 0 chr20 22133834 22134117 -50019765 - AluSx SINE Alu -16 296 13 5177 177 49 48 chr20 22134117 22134489 -50019393 + L1MC1 LINE L1 2079 2449 -3977 2230 96 17 0 chr20 22134489 22134790 -50019092 + AluSq SINE Alu 1 306 -7 5177 177 49 48 chr20 22134790 22135375 -50018507 + L1MC1 LINE L1 2449 3045 -3381 6822 123 25 6 chr20 22135378 22136631 -50017251 + L1MA2 LINE L1 5024 6304 0 1863 201 28 100 chr20 22136639 22136938 -50016944 + L1MC1 LINE L1 3032 3351 -3075 819 90 0 0 chr20 22136938 22137049 -50016833 + HY1 scRNA scRNA 1 111 -1 1863 201 28 100 chr20 22137049 22137183 -50016699 + L1MC1 LINE L1 3351 3493 -2933 2095 117 3 3 chr20 22137183 22137483 -50016399 + AluSq SINE Alu 2 301 -12 1863 201 28 100 chr20 22137483 22137520 -50016362 + L1MC1 LINE L1 3493 3531 -2895 1984 129 0 28 chr20 22137520 22137838 -50016044 + AluSx SINE Alu 1 309 -3 1863 201 28 100 chr20 22137838 22138144 -50015738 + L1MC1 LINE L1 3531 3754 -2672 354 243 22 44 chr20 22138182 22138306 -50015576 - L1MC4 LINE L1 -1341 6981 1995 330 288 17 42 chr20 22138311 22138429 -50015453 + L1MC4 LINE L1 6595 6709 -1333 * 351 248 35 53 chr20 22138370 22138483 -50015399 - L1MC4 LINE L1 -1337 6705 6595 335 302 17 26 chr20 22138407 22138523 -50015359 + L1MC4 LINE L1 6595 6709 -1333 * 328 256 17 86 chr20 22138458 22138575 -50015307 - L1MC4 LINE L1 -1339 6703 6595 * 6823 184 36 47 chr20 22138587 22138702 -50015180 + L1MC1 LINE L1 3745 3860 -2753 2062 107 0 0 chr20 22138702 22138982 -50014900 - AluSx SINE Alu -18 294 15 6823 184 36 47 chr20 22138982 22139132 -50014750 + L1MC1 LINE L1 3860 4010 -2603 2063 135 0 0 chr20 22139132 22139443 -50014439 + AluSx SINE Alu 1 311 -1 6823 184 36 47 chr20 22139443 22140399 -50013483 + L1MC1 LINE L1 4010 4975 -1638 1773 136 3 46 chr20 22140399 22140544 -50013338 + AluJb SINE Alu 1 128 -184 1567 181 3 17 chr20 22140544 22140843 -50013039 + AluJo SINE Alu 1 295 -17 1773 136 3 46 chr20 22140843 22140999 -50012883 + AluJb SINE Alu 128 289 -23 6823 184 36 47 chr20 22140999 22141392 -50012490 + L1MC1 LINE L1 4975 5371 -1242 760 208 0 0 chr20 22141392 22141522 -50012360 + FLAM_A SINE Alu 1 130 -3 6823 184 36 47 chr20 22141522 22142598 -50011284 + L1MC1 LINE L1 5371 6402 -211 2079 106 0 3 chr20 22142598 22142916 -50010966 + AluSx SINE Alu 1 317 0 6823 184 36 47 chr20 22142916 22143121 -50010761 + L1MC1 LINE L1 6402 6608 -5 1342 118 32 79 chr20 22143287 22143330 -50010552 - MER33 DNA MER1_type -2303 282 239 1953 104 58 0 chr20 22143330 22143608 -50010274 + AluSg SINE Alu 3 296 -14 1342 118 32 79 chr20 22143608 22143882 -50010000 - MER33 DNA MER1_type -2346 239 1 2551 189 25 32 chr20 22144140 22144702 -50009180 + MER74A LTR ERVL 1 558 0 235 0 0 54 chr20 22144981 22145018 -50008864 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 1982 112 0 0 chr20 22145022 22145300 -50008582 - AluSq SINE Alu -35 278 1 1765 164 0 0 chr20 22146036 22146323 -50007559 - AluJb SINE Alu -25 287 1 1995 120 10 0 chr20 22146335 22146627 -50007255 - AluSx SINE Alu -17 295 1 206 286 66 44 chr20 22146746 22146837 -50007045 + L2 LINE L2 3176 3268 -45 2001 145 3 0 chr20 22147046 22147357 -50006525 + AluSx SINE Alu 1 312 0 1366 244 96 12 chr20 22147357 22147762 -50006120 - L1ME3 LINE L1 -46 6116 5678 900 270 22 18 chr20 22147783 22148061 -50005821 - L1ME1 LINE L1 -41 6125 5847 756 141 7 22 chr20 22148068 22148203 -50005679 + MER7A DNA MER2_type 1 131 -215 553 232 116 49 chr20 22148271 22148495 -50005387 - L1ME1 LINE L1 -473 5689 5451 240 248 128 23 chr20 22148551 22148684 -50005198 + LTR16A1 LTR ERVL 1 147 -310 927 248 5 0 chr20 22148741 22148947 -50004935 + LTR16A1 LTR ERVL 251 457 0 239 288 25 0 chr20 22149013 22149093 -50004789 - MLT1J LTR MaLR -6 505 424 1938 99 11 0 chr20 22149456 22149728 -50004154 - AluSp SINE Alu -4 309 35 2128 129 3 0 chr20 22149890 22150201 -50003681 + AluSx SINE Alu 1 312 0 271 277 231 15 chr20 22150380 22150510 -50003372 + L2 LINE L2 3106 3263 -9 1906 137 3 7 chr20 22150518 22150817 -50003065 + AluSq SINE Alu 1 298 -15 2099 115 3 0 chr20 22150893 22151197 -50002685 + AluSp SINE Alu 1 305 -8 943 230 238 48 chr20 22151198 22151677 -50002205 + MLT1G LTR MaLR 19 588 -2 2144 107 3 7 chr20 22151770 22152080 -50001802 - AluSc SINE Alu 0 309 1 487 264 125 43 chr20 22152300 22152508 -50001374 - MER102b DNA MER1_type -10 331 107 1341 221 35 81 chr20 22152693 22153127 -50000755 + L1ME3A LINE L1 5494 5907 -263 234 115 231 0 chr20 22153188 22153240 -50000642 + L1ME3A LINE L1 5922 5985 -185 871 186 11 44 chr20 22153240 22153423 -50000459 - FRAM SINE Alu -2 174 1 4193 97 4 0 chr20 22153432 22153981 -49999901 - MER41A LTR ERV1 -3 551 1 888 192 34 6 chr20 22153987 22154164 -49999718 + L1ME3A LINE L1 5982 6163 -7 1995 117 3 46 chr20 22154167 22154493 -49999389 - AluSx SINE Alu 0 312 1 277 250 0 120 chr20 22154535 22154643 -49999239 + MLT1I LTR MaLR 242 336 -73 423 0 0 0 chr20 22154643 22154690 -49999192 + (TG)n Simple_repeat Simple_repeat 2 48 0 541 179 20 179 chr20 22154907 22154957 -49998925 + MER5A DNA MER1_type 26 82 -107 349 123 18 0 chr20 22154957 22155014 -49998868 + U7 snRNA snRNA 5 62 -1 541 179 20 179 chr20 22155014 22155042 -49998840 + MER5A DNA MER1_type 82 113 -76 2508 116 18 53 chr20 22155042 22155112 -49998770 - Tigger2a DNA MER2_type -2274 434 363 2098 129 0 0 chr20 22155112 22155414 -49998468 - AluSx SINE Alu -10 302 1 2508 116 18 53 chr20 22155414 22155793 -49998089 - Tigger2a DNA MER2_type -2345 363 1 541 179 20 179 chr20 22155793 22155908 -49997974 + MER5A DNA MER1_type 113 189 0 723 209 0 7 chr20 22155914 22156053 -49997829 - MER58B DNA MER1_type -1 340 203 1824 109 69 0 chr20 22156560 22156834 -49997048 - AluSx SINE Alu -19 293 1 694 285 155 24 chr20 22157201 22157626 -49996256 - MLT1K LTR MaLR -41 547 67 905 216 112 65 chr20 22157668 22157792 -49996090 - LTR16C LTR ERVL -2 489 372 2287 56 0 7 chr20 22157792 22158094 -49995788 + AluY SINE Alu 3 302 -9 905 216 112 65 chr20 22158094 22158247 -49995635 - LTR16C LTR ERVL -119 372 199 232 231 0 19 chr20 22158293 22158345 -49995537 + G-rich Low_complexity Low_complexity 5 55 0 26 50 0 0 chr20 22159097 22159137 -49994745 + AT_rich Low_complexity Low_complexity 1 40 0 314 136 0 17 chr20 22159181 22159240 -49994642 + (TTTC)n Simple_repeat Simple_repeat 3 60 0 2052 133 0 0 chr20 22159242 22159535 -49994347 - AluSx SINE Alu -19 293 1 1740 133 41 4 chr20 22159566 22159837 -49994045 + AluJo SINE Alu 1 281 -31 23 0 0 0 chr20 22160526 22160549 -49993333 + AT_rich Low_complexity Low_complexity 1 23 0 1517 154 38 10 chr20 22160706 22160998 -49992884 - L1MA4 LINE L1 -4 6296 5997 1847 162 0 0 chr20 22161081 22161383 -49992499 - AluSx SINE Alu -8 304 3 1970 118 7 0 chr20 22161387 22161676 -49992206 - AluSp SINE Alu -22 291 1 381 230 0 0 chr20 22161687 22161761 -49992121 + MLT1D LTR MaLR 115 188 -317 1149 148 38 5 chr20 22161762 22161971 -49991911 + AluSg/x SINE Alu 84 299 -11 685 165 5 10 chr20 22161971 22162165 -49991717 + GA-rich Low_complexity Low_complexity 1 193 0 2224 87 0 3 chr20 22162177 22162475 -49991407 + AluSx SINE Alu 5 301 -11 1327 223 32 10 chr20 22162476 22162785 -49991097 + MLT1D LTR MaLR 188 503 -2 288 134 30 75 chr20 22162788 22162855 -49991027 - L1MC3 LINE L1 -678 7107 7044 322 263 62 62 chr20 22162915 22163075 -49990807 - HAL1b LINE L1 -417 931 772 537 232 107 30 chr20 22163843 22164032 -49989850 + L1M4 LINE L1 2860 3076 -3070 1531 160 35 42 chr20 22164032 22164174 -49989708 + AluJo SINE Alu 1 142 -170 2265 99 0 0 chr20 22164174 22164477 -49989405 + AluSx SINE Alu 1 303 -9 1531 160 35 42 chr20 22164477 22164646 -49989236 + AluJo SINE Alu 142 310 -2 537 232 107 30 chr20 22164646 22164719 -49989163 + L1M4 LINE L1 3076 3142 -3004 1185 212 43 64 chr20 22164810 22165183 -49988699 - MLT1A1 LTR MaLR 0 365 1 2231 109 0 0 chr20 22165204 22165516 -49988366 - AluSx SINE Alu 0 312 1 189 388 62 6 chr20 22165540 22165700 -49988182 + L2 LINE L2 2687 2855 -459 658 261 90 25 chr20 22165791 22166043 -49987839 + MLT1J2 LTR MaLR 65 329 -121 520 304 84 87 chr20 22166040 22166166 -49987716 - MLT1K LTR MaLR -179 409 284 * 2128 125 3 3 chr20 22166166 22166478 -49987404 + AluSx SINE Alu 1 312 0 520 304 84 87 chr20 22166478 22166686 -49987196 - MLT1K LTR MaLR -304 284 76 999 308 165 18 chr20 22167011 22167885 -49985997 - L2 LINE L2 -223 3049 2032 832 175 94 12 chr20 22167917 22168088 -49985794 - MER5A DNA MER1_type -4 185 1 537 263 138 76 chr20 22168096 22168568 -49985314 - L2 LINE L2 -1525 1789 1289 233 167 37 37 chr20 22168585 22168639 -49985243 + MER3 DNA MER1_type 12 65 -144 * 395 247 0 0 chr20 22168628 22168717 -49985165 - MER3 DNA MER1_type -25 184 96 427 336 32 9 chr20 22168783 22169003 -49984879 - L2 LINE L2 -2102 1212 988 446 194 62 39 chr20 22169030 22169159 -49984723 + L1MC5 LINE L1 7049 7180 -781 2234 87 7 0 chr20 22169164 22169463 -49984419 + AluSp SINE Alu 1 301 -12 252 264 77 0 chr20 22169465 22169556 -49984326 + L1MC5 LINE L1 7346 7443 -518 921 222 50 61 chr20 22169677 22169938 -49983944 + MLT1A1 LTR MaLR 40 297 -68 1329 158 9 4 chr20 22169951 22170179 -49983703 + AluJb SINE Alu 1 229 -83 293 136 106 0 chr20 22170193 22170259 -49983623 + MLT1A1 LTR MaLR 383 455 -2 2090 115 14 0 chr20 22170286 22170581 -49983301 + AluSx SINE Alu 1 299 -13 2018 127 0 0 chr20 22170584 22170891 -49982991 + AluSq SINE Alu 1 307 0 365 306 64 17 chr20 22170954 22171127 -49982755 - L1MC/D LINE L1 -2097 5711 5531 305 229 125 78 chr20 22171653 22171845 -49982037 - L1MDa LINE L1 -5110 1430 1230 2051 80 3 80 chr20 22171852 22172189 -49981693 - AluSx SINE Alu -1 311 1 314 221 118 37 chr20 22172195 22172210 -49981672 - L1MA10 LINE L1 -3 6331 6317 1739 222 45 138 chr20 22172210 22172900 -49980982 - L1ME2 LINE L1 -9 6155 5582 1823 170 0 6 chr20 22172900 22173212 -49980670 - AluJb SINE Alu -2 310 1 1739 222 45 138 chr20 22173212 22173567 -49980315 - L1ME2 LINE L1 -582 5582 5195 30 0 0 0 chr20 22173666 22173696 -49980186 + AT_rich Low_complexity Low_complexity 1 30 0 594 90 27 99 chr20 22173697 22173768 -49980114 - U6 snRNA snRNA -4 103 41 1864 129 42 0 chr20 22173768 22174055 -49979827 - AluSx SINE Alu -13 299 1 594 90 27 99 chr20 22174055 22174094 -49979788 - U6 snRNA snRNA -66 41 1 497 205 27 36 chr20 22174781 22174857 -49979025 + MER5A DNA MER1_type 3 77 -112 678 180 66 60 chr20 22174857 22175040 -49978842 - MER5A DNA MER1_type -3 186 3 262 266 85 21 chr20 22175046 22175140 -49978742 - MER5B DNA MER1_type -78 100 1 3091 200 84 40 chr20 22175663 22175903 -49977979 - L1ME3 LINE L1 -1 6161 5933 1716 167 0 28 chr20 22175903 22176221 -49977661 - AluJo SINE Alu -3 309 1 3091 200 84 40 chr20 22176221 22176703 -49977179 - L1ME3 LINE L1 -229 5933 5397 2084 118 0 3 chr20 22176703 22177000 -49976882 - AluSx SINE Alu -16 296 1 3091 200 84 40 chr20 22177000 22177085 -49976797 - L1ME3 LINE L1 -765 5397 5317 251 333 0 0 chr20 22177232 22177310 -49976572 + L2 LINE L2 3189 3266 -6 2015 142 0 0 chr20 22177935 22178237 -49975645 - AluSx SINE Alu -10 302 1 635 107 0 0 chr20 22178593 22178677 -49975205 - AluS SINE Alu -227 85 2 972 144 33 28 chr20 22179081 22179232 -49974650 + MER3 DNA MER1_type 1 150 -59 219 69 0 0 chr20 22179232 22179261 -49974621 + (TTAA)n Simple_repeat Simple_repeat 3 31 0 1137 192 137 16 chr20 22179261 22179516 -49974366 - AluJo SINE Alu -16 286 1 972 144 33 28 chr20 22179516 22179543 -49974339 + MER3 DNA MER1_type 149 181 -28 27 0 0 0 chr20 22179565 22179592 -49974290 + AT_rich Low_complexity Low_complexity 1 27 0 3070 112 14 40 chr20 22179593 22180093 -49973789 - L1MA6 LINE L1 -7 6293 5807 706 243 41 34 chr20 22180182 22180431 -49973451 + MIR SINE MIR 8 251 -11 2836 184 43 30 chr20 22180639 22181249 -49972633 - L1MC4 LINE L1 -22 8020 7403 300 227 133 16 chr20 22181535 22181663 -49972219 - L1ME4a LINE L1 -3 6118 5976 983 167 0 90 chr20 22182501 22182668 -49971214 - AluJo SINE Alu -16 296 154 2334 75 3 7 chr20 22182668 22182974 -49970908 - AluSp SINE Alu -8 305 1 983 167 0 90 chr20 22182974 22183039 -49970843 - AluJo SINE Alu -158 154 85 732 173 24 0 chr20 22183039 22183166 -49970716 - AluJo SINE Alu -62 250 121 865 171 0 0 chr20 22183188 22183328 -49970554 - AluJo SINE Alu -167 145 6 281 280 59 51 chr20 22183339 22183457 -49970425 - MIR SINE MIR -15 247 129 1872 118 88 6 chr20 22183694 22184023 -49969859 - L1MB2 LINE L1 -2 6169 5814 999 99 0 0 chr20 22184024 22184155 -49969727 - AluSg SINE Alu -179 131 1 6846 125 8 2 chr20 22184155 22186082 -49967800 - L1MA3 LINE L1 -119 6186 4249 2109 125 3 3 chr20 22186086 22186399 -49967483 - AluSq SINE Alu 0 313 1 762 186 0 0 chr20 22186442 22186560 -49967322 - FLAM_C SINE Alu -15 118 1 942 177 0 0 chr20 22186561 22186719 -49967163 - L1MB2 LINE L1 -415 5756 5599 415 217 11 11 chr20 22186719 22186811 -49967071 + LTR16C LTR ERVL 394 485 -6 981 212 186 65 chr20 22186862 22187385 -49966497 - MLT1G1 LTR MaLR -9 586 1 280 250 31 0 chr20 22187385 22187449 -49966433 - MIR SINE MIR -189 73 8 543 322 131 59 chr20 22187600 22187754 -49966128 + L3 LINE CR1 202 344 -1233 1795 221 45 22 chr20 22187754 22188248 -49965634 + MLT1D LTR MaLR 1 505 0 543 322 131 59 chr20 22188248 22188342 -49965540 + L3 LINE CR1 344 430 -1147 678 203 23 0 chr20 22188342 22188470 -49965412 - FLAM_A SINE Alu -2 131 1 543 322 131 59 chr20 22188470 22189046 -49964836 + L3 LINE CR1 430 1086 -491 281 221 88 0 chr20 22189120 22189188 -49964694 + LTR33 LTR ERVL 17 90 -431 2095 177 131 23 chr20 22189191 22189678 -49964204 - MLT1F LTR MaLR -2 540 1 1950 128 0 0 chr20 22190167 22190469 -49963413 + AluSx SINE Alu 1 302 0 497 312 56 32 chr20 22191646 22192110 -49961772 + LTR33 LTR ERVL 13 512 -9 328 291 146 0 chr20 22193054 22193157 -49960725 - MIR SINE MIR -105 157 40 414 297 131 46 chr20 22193237 22193671 -49960211 - LTR33 LTR ERVL -4 517 47 1671 161 4 4 chr20 22194091 22194371 -49959511 - AluJo SINE Alu -20 292 13 417 270 50 0 chr20 22194420 22194579 -49959303 - LTR16C LTR ERVL -25 466 300 965 198 11 6 chr20 22195659 22195836 -49958046 + MER45A DNA AcHobo 1 178 0 2400 89 0 0 chr20 22195963 22196255 -49957627 - AluSq SINE Alu -21 292 1 23 0 0 0 chr20 22196313 22196336 -49957546 + AT_rich Low_complexity Low_complexity 1 23 0 315 261 29 32 chr20 22196339 22196512 -49957370 - HAL1b LINE L1 -5 1343 1218 368 292 52 105 chr20 22196526 22196796 -49957086 - L1ME4a LINE L1 -157 5964 5710 2246 128 0 0 chr20 22196796 22197101 -49956781 + AluSx SINE Alu 3 307 -5 368 292 52 105 chr20 22197101 22197135 -49956747 - L1ME4a LINE L1 -411 5710 5676 857 147 14 14 chr20 22197379 22197522 -49956360 - FLAM_C SINE Alu 0 143 1 212 253 67 27 chr20 22197693 22197768 -49956114 + L2 LINE L2 3194 3271 -1 2538 83 0 3 chr20 22197778 22198091 -49955791 + AluSq SINE Alu 1 312 -1 1180 273 8 31 chr20 22198373 22198757 -49955125 - L1ME2 LINE L1 -10 6154 5780 760 316 73 21 chr20 22199183 22199651 -49954231 + L2 LINE L2 2047 2538 -776 2173 204 22 67 chr20 22199653 22199704 -49954178 - L1MA10 LINE L1 0 6334 6282 2297 113 3 0 chr20 22199704 22200004 -49953878 - AluSx SINE Alu -11 301 1 2173 204 22 67 chr20 22200004 22200502 -49953380 - L1MA10 LINE L1 -52 6282 5844 1829 175 3 13 chr20 22200502 22200811 -49953071 - AluJo SINE Alu -6 306 1 2173 204 22 67 chr20 22200811 22201003 -49952879 - L1MA10 LINE L1 -490 5844 5645 264 215 31 0 chr20 22201052 22201117 -49952765 + MER53 DNA DNA 105 171 -18 1651 166 87 11 chr20 22201647 22201924 -49951958 + AluJb SINE Alu 1 298 -14 244 235 265 10 chr20 22202531 22202629 -49951253 + L2 LINE L2 3134 3256 -16 945 218 0 24 chr20 22202854 22203065 -49950817 - MIR SINE MIR -55 207 2 1950 170 0 0 chr20 22204065 22204354 -49949528 - AluJo SINE Alu -23 289 1 282 159 0 0 chr20 22204458 22204502 -49949380 + L2 LINE L2 3209 3252 -20 1699 150 21 31 chr20 22205524 22205810 -49948072 - AluJb SINE Alu -13 299 17 1064 170 150 20 chr20 22206073 22206414 -49947468 + LTR37A LTR ERV1 40 424 -2 1701 141 47 36 chr20 22206563 22206839 -49947043 + AluJo SINE Alu 1 279 -33 209 350 0 0 chr20 22206994 22207074 -49946808 - MIR3 SINE MIR -9 199 120 272 200 62 75 chr20 22208011 22208091 -49945791 - MIR SINE MIR -73 189 111 503 208 9 9 chr20 22208631 22208737 -49945145 + MIR SINE MIR 100 205 -57 1213 223 103 3 chr20 22209661 22209980 -49943902 + LTR16C LTR ERVL 136 486 -5 665 293 24 48 chr20 22210595 22210844 -49943038 - MIR SINE MIR 0 262 20 2564 70 0 16 chr20 22211457 22211770 -49942112 + AluY SINE Alu 1 308 -3 770 249 33 5 chr20 22212028 22212241 -49941641 + MER20 DNA MER1_type 1 219 0 918 204 73 19 chr20 22212553 22212759 -49941123 - MER20 DNA MER1_type -1 218 2 222 233 0 0 chr20 22212815 22212858 -49941024 + L2 LINE L2 3261 3303 -10 2182 87 28 3 chr20 22212929 22213217 -49940665 - AluSp SINE Alu -18 295 1 1007 259 28 58 chr20 22213998 22214361 -49939521 - MLT1G1 LTR MaLR -243 352 1 186 133 0 0 chr20 22214697 22214727 -49939155 + (TTCC)n Simple_repeat Simple_repeat 4 33 0 748 275 99 20 chr20 22215357 22215659 -49938223 - L2 LINE L2 0 3313 2988 2177 134 7 0 chr20 22215730 22216037 -49937845 + AluSx SINE Alu 1 309 -3 1392 256 119 20 chr20 22216200 22216736 -49937146 + MLT1E LTR MaLR 5 593 0 453 116 0 0 chr20 22218700 22218769 -49935113 + (CA)n Simple_repeat Simple_repeat 1 69 0 318 321 91 32 chr20 22218780 22218967 -49934915 - MIR SINE MIR -19 243 46 315 183 56 0 chr20 22219128 22219199 -49934683 + MLT1J LTR MaLR 418 492 -19 212 239 28 28 chr20 22219318 22219389 -49934493 + L2 LINE L2 2987 3057 -215 526 244 114 42 chr20 22219553 22219746 -49934136 + MER63A DNA MER1_type 4 210 0 1482 199 143 44 chr20 22219905 22220402 -49933480 + MLT1H LTR MaLR 4 549 0 303 28 0 0 chr20 22220836 22220872 -49933010 + (TTA)n Simple_repeat Simple_repeat 2 37 0 216 235 0 0 chr20 22221153 22221204 -49932678 + MIR SINE MIR 71 121 -87 197 299 45 0 chr20 22221460 22221527 -49932355 + MIR SINE MIR 68 137 -71 504 72 0 0 chr20 22221527 22221596 -49932286 + (TCCC)n Simple_repeat Simple_repeat 3 71 0 1944 175 0 6 chr20 22221596 22221942 -49931940 - AluJb SINE Alu 0 344 1 192 303 17 101 chr20 22222268 22222307 -49931575 + MIR SINE MIR 153 194 -68 2327 83 0 0 chr20 22222307 22222619 -49931263 + AluY SINE Alu 1 311 0 192 303 17 101 chr20 22222619 22222698 -49931184 + MIR SINE MIR 194 261 -1 683 241 87 46 chr20 22223021 22223384 -49930498 + LTR33A LTR ERVL 3 446 -77 16082 118 29 49 chr20 22223384 22224481 -49929401 + Tigger2 DNA MER2_type 1 1119 -1599 2347 74 44 0 chr20 22224481 22224779 -49929103 + AluY SINE Alu 1 311 0 16082 118 29 49 chr20 22224779 22225866 -49928016 + Tigger2 DNA MER2_type 1119 2120 -598 2258 122 7 0 chr20 22225866 22226162 -49927720 + AluSx SINE Alu 1 298 -14 16082 118 29 49 chr20 22226162 22226747 -49927135 + Tigger2 DNA MER2_type 2120 2715 -3 1479 218 135 48 chr20 22226975 22227470 -49926412 + MLT1H LTR MaLR 1 538 -11 385 289 40 33 chr20 22228120 22228272 -49925610 - MER115 DNA AcHobo -530 163 11 203 200 0 20 chr20 22229060 22229110 -49924772 - MIR SINE MIR -69 139 91 366 294 10 10 chr20 22229570 22229879 -49924003 + (TG)n Simple_repeat Simple_repeat 1 309 0 1861 146 45 0 chr20 22230125 22230413 -49923469 + AluJb SINE Alu 1 301 -11 224 59 29 0 chr20 22230660 22230694 -49923188 + (TTG)n Simple_repeat Simple_repeat 1 35 0 188 311 0 67 chr20 22230763 22230882 -49923000 + MIR SINE MIR 47 157 -105 222 267 0 17 chr20 22230882 22230942 -49922940 + (TG)n Simple_repeat Simple_repeat 2 60 0 244 222 63 0 chr20 22230944 22231007 -49922875 + MIR SINE MIR 118 184 -78 815 282 158 18 chr20 22231028 22231485 -49922397 + LTR33A LTR ERVL 3 523 0 1370 120 0 16 chr20 22231667 22231838 -49922044 - AluSc SINE Alu -7 302 133 2199 104 0 10 chr20 22231838 22232156 -49921726 - AluY SINE Alu 0 311 1 1370 120 0 16 chr20 22232156 22232175 -49921707 - AluSc SINE Alu -176 133 115 284 260 180 27 chr20 22232177 22232327 -49921555 + MIR SINE MIR 6 178 -84 836 186 103 0 chr20 22232354 22232471 -49921411 + AluJo SINE Alu 1 137 -175 899 81 23 29 chr20 22232471 22232643 -49921239 + (GAAA)n Simple_repeat Simple_repeat 2 172 0 836 186 103 0 chr20 22232643 22232670 -49921212 + AluJo SINE Alu 137 160 -152 245 246 29 14 chr20 22232670 22232739 -49921143 - MIR SINE MIR -162 100 31 857 174 7 7 chr20 22232740 22232895 -49920987 + AluJo SINE Alu 157 311 -1 208 299 81 11 chr20 22233233 22233320 -49920562 + L2 LINE L2 2928 3020 -252 270 312 138 0 chr20 22233527 22233636 -49920246 - MIR SINE MIR -19 243 120 194 355 65 16 chr20 22233685 22233809 -49920073 + L2 LINE L2 3142 3271 -1 1017 99 44 22 chr20 22234825 22235006 -49918876 - MER53 DNA DNA -1 188 4 286 244 47 12 chr20 22235588 22235674 -49918208 + MER5B DNA MER1_type 33 121 -57 2075 117 20 13 chr20 22235694 22235992 -49917890 + AluSx SINE Alu 1 300 -12 742 228 75 31 chr20 22236041 22236295 -49917587 + LTR16C LTR ERVL 201 465 -26 266 340 90 21 chr20 22236382 22236570 -49917312 + MIR SINE MIR 20 220 -42 214 255 20 0 chr20 22236989 22237040 -49916842 + L2 LINE L2 3210 3261 -11 203 343 0 37 chr20 22237550 22237684 -49916198 - MIR SINE MIR -28 234 106 614 263 43 60 chr20 22238656 22238957 -49914925 - LTR16A1 LTR ERVL -3 454 159 217 218 36 82 chr20 22239066 22239105 -49914777 + MIR SINE MIR 110 149 -113 2329 101 0 3 chr20 22239105 22239402 -49914480 + AluSg SINE Alu 1 296 -14 217 218 36 82 chr20 22239402 22239472 -49914410 + MIR SINE MIR 149 214 -48 2278 114 10 3 chr20 22239634 22239940 -49913942 + AluSx SINE Alu 1 308 -4 550 236 32 83 chr20 22240193 22240409 -49913473 + Charlie8 DNA MER1_type 3 207 -2210 1089 322 89 32 chr20 22242445 22242930 -49910952 - L1MC4a LINE L1 -894 5252 5305 2262 102 7 0 chr20 22242930 22243224 -49910658 + AluSx SINE Alu 1 296 -16 1089 322 89 32 chr20 22243224 22243637 -49910245 - L1MC4a LINE L1 -840 5306 4918 2281 125 0 0 chr20 22243650 22243953 -49909929 - AluSx SINE Alu -9 303 1 6691 112 42 16 chr20 22244037 22245152 -49908730 - Tigger3b DNA MER2_type 0 1231 88 570 165 0 0 chr20 22245152 22245249 -49908633 - AluJb SINE Alu -12 300 204 342 135 0 0 chr20 22245249 22245301 -49908581 - Tigger3b DNA MER2_type -1139 92 41 232 302 103 17 chr20 22245705 22245821 -49908061 - MIR SINE MIR -117 145 20 376 219 219 0 chr20 22246745 22246859 -49907023 - L1MC4 LINE L1 0 8042 7904 237 225 8 16 chr20 22246880 22246990 -49906892 + CT-rich Low_complexity Low_complexity 1 109 0 1875 173 10 0 chr20 22247004 22247305 -49906577 - AluJo SINE Alu -8 304 1 387 334 92 18 chr20 22247311 22247703 -49906179 - L1MC4 LINE L1 -142 7900 7480 1785 163 147 3 chr20 22247703 22248077 -49905805 - MSTC LTR MaLR 0 428 1 1828 167 7 7 chr20 22248144 22248431 -49905451 - AluJo SINE Alu -24 288 2 325 292 230 26 chr20 22248618 22249070 -49904812 + L2 LINE L2 2711 3272 0 589 197 197 7 chr20 22250021 22250168 -49903714 - MER5B DNA MER1_type -3 175 1 429 274 44 18 chr20 22250232 22250345 -49903537 + MER91C DNA MER1_type 1 116 -24 35 0 0 0 chr20 22250532 22250567 -49903315 + AT_rich Low_complexity Low_complexity 1 35 0 902 296 139 7 chr20 22250823 22251282 -49902600 + MLT1G1 LTR MaLR 76 595 0 222 37 0 0 chr20 22251454 22251481 -49902401 + (TG)n Simple_repeat Simple_repeat 2 28 0 283 286 48 62 chr20 22251512 22251722 -49902160 - HAL1 LINE L1 -56 2451 2245 308 342 0 51 chr20 22251751 22251868 -49902014 - HAL1b LINE L1 -418 930 820 451 243 53 46 chr20 22252120 22252468 -49901414 + LTR33 LTR ERVL 106 512 -9 517 255 120 13 chr20 22252478 22252740 -49901142 - LTR16A LTR ERVL -13 437 106 401 190 51 0 chr20 22252875 22252954 -49900928 + L2 LINE L2 3229 3311 -2 628 230 59 81 chr20 22253050 22253372 -49900510 - L1MC4 LINE L1 0 8042 7728 371 207 111 30 chr20 22253433 22253568 -49900314 - L1MC4 LINE L1 -441 7601 7456 222 246 87 14 chr20 22253660 22253729 -49900153 - MIR SINE MIR -84 124 51 332 266 113 8 chr20 22254533 22254657 -49899225 + MIR SINE MIR 56 192 -70 192 94 31 0 chr20 22255236 22255268 -49898614 + L2 LINE L2 2713 2745 -569 2076 154 70 0 chr20 22255293 22255662 -49898220 + MER57A LTR ERV1 8 402 -1 1815 129 39 4 chr20 22255734 22256014 -49897868 - AluSx SINE Alu -22 290 1 2564 81 0 0 chr20 22256139 22256449 -49897433 - AluY SINE Alu -1 310 1 243 299 131 0 chr20 22256449 22256548 -49897334 + L2 LINE L2 2921 3036 -236 604 280 93 0 chr20 22256628 22256810 -49897072 - MER63A DNA MER1_type -11 199 1 1885 270 42 13 chr20 22257158 22257684 -49896198 + MLT1H1 LTR MaLR 1 541 -14 592 264 6 31 chr20 22257694 22257829 -49896053 - MIR SINE MIR -25 237 105 1537 164 117 33 chr20 22257829 22258189 -49895693 + MLT1B LTR MaLR 1 390 0 592 264 6 31 chr20 22258189 22258212 -49895670 - MIR SINE MIR -157 105 83 1756 299 57 26 chr20 22258212 22258399 -49895483 + MER115 DNA AcHobo 1 181 -512 1860 177 0 13 chr20 22258399 22258704 -49895178 - AluJo SINE Alu -11 301 1 1756 299 57 26 chr20 22258704 22259165 -49894717 + MER115 DNA AcHobo 181 669 -24 1095 118 106 0 chr20 22259312 22259473 -49894409 + FRAM SINE Alu 1 174 -2 1014 237 134 44 chr20 22261117 22261579 -49892303 - MLT1D LTR MaLR -3 502 7 249 213 160 27 chr20 22261671 22261746 -49892136 + MIR3 SINE MIR 108 192 -16 717 99 0 92 chr20 22261844 22261891 -49891991 - L1MB4 LINE L1 -2 6178 6128 1685 146 91 11 chr20 22261891 22262166 -49891716 - AluJo SINE Alu -15 297 1 717 99 0 92 chr20 22262166 22262249 -49891633 - L1MB4 LINE L1 -52 6128 6060 791 207 56 0 chr20 22262529 22262708 -49891174 + MER5A DNA MER1_type 1 189 0 309 324 48 0 chr20 22262843 22262988 -49890894 + Charlie8 DNA MER1_type 5 156 -2261 1408 127 15 50 chr20 22263204 22263503 -49890379 + MLT2D LTR ERVL 1 377 -37 359 73 18 0 chr20 22263503 22263558 -49890324 + (CA)n Simple_repeat Simple_repeat 1 56 0 1408 127 15 50 chr20 22263558 22263593 -49890289 + MLT2D LTR ERVL 377 412 -2 2272 99 3 0 chr20 22263797 22264104 -49889778 - AluSp SINE Alu 0 308 1 702 242 58 54 chr20 22264123 22264179 -49889703 - MIR SINE MIR 0 262 208 2335 107 3 0 chr20 22264179 22264477 -49889405 - AluSx SINE Alu -13 299 1 702 242 58 54 chr20 22264477 22264680 -49889202 - MIR SINE MIR -54 208 2 479 174 80 14 chr20 22264933 22265071 -49888811 + L1ME2 LINE L1 5779 5925 -239 * 2092 217 45 32 chr20 22265065 22265622 -49888260 + L1MD3 LINE L1 7422 7985 -10 348 232 12 12 chr20 22267050 22267132 -49886750 - LTR16C LTR ERVL -11 480 399 610 208 197 22 chr20 22268182 22268360 -49885522 + MER3 DNA MER1_type 1 209 0 322 312 46 9 chr20 22268720 22268829 -49885053 - MIR SINE MIR -62 146 34 191 255 160 43 chr20 22269177 22269271 -49884611 + L3b LINE CR1 1358 1462 -121 257 197 76 15 chr20 22269568 22269634 -49884248 - MER5C DNA MER1_type -3 321 252 231 279 33 0 chr20 22269736 22269797 -49884085 - MER5C DNA MER1_type -200 124 62 1067 192 70 96 chr20 22269815 22270158 -49883724 + MER58B DNA MER1_type 5 338 -3 228 308 8 26 chr20 22270827 22270944 -49882938 + CT-rich Low_complexity Low_complexity 3 117 0 238 276 35 0 chr20 22271093 22271151 -49882731 - L2 LINE L2 -96 3176 3117 1799 154 10 13 chr20 22271168 22271466 -49882416 - AluJo SINE Alu -15 297 1 3842 157 30 30 chr20 22271483 22271728 -49882154 - L1MA7 LINE L1 -1 6290 6046 2536 65 3 0 chr20 22271728 22272037 -49881845 + AluY SINE Alu 1 310 -1 3842 157 30 30 chr20 22272037 22272473 -49881409 - L1MA7 LINE L1 -245 6046 5606 2335 72 0 26 chr20 22272473 22272779 -49881103 - AluY SINE Alu -13 298 1 3842 157 30 30 chr20 22272779 22272852 -49881030 - L1MA7 LINE L1 -684 5607 5535 389 283 187 27 chr20 22273088 22273388 -49880494 - L2 LINE L2 -559 2755 2408 258 167 17 17 chr20 22273397 22273457 -49880425 - MLT1I LTR MaLR -25 384 325 790 259 122 75 chr20 22274095 22274547 -49879335 - MLT1J LTR MaLR -38 473 1 396 0 0 0 chr20 22274555 22274599 -49879283 + (TG)n Simple_repeat Simple_repeat 2 45 0 259 333 36 14 chr20 22274610 22274748 -49879134 + MIR3 SINE MIR 3 143 -65 24 0 0 0 chr20 22274823 22274847 -49879035 + AT_rich Low_complexity Low_complexity 1 24 0 733 271 108 55 chr20 22275075 22275584 -49878298 - MLT1F LTR MaLR -6 536 1 597 229 23 57 chr20 22275584 22275759 -49878123 - MER5B DNA MER1_type -9 169 1 501 203 57 63 chr20 22276911 22277069 -49876813 + LTR33A LTR ERVL 6 162 -361 543 291 122 0 chr20 22277170 22277366 -49876516 + LTR33A LTR ERVL 304 523 0 513 359 63 41 chr20 22277379 22277696 -49876186 - L3 LINE CR1 -265 1312 985 1274 202 153 9 chr20 22277696 22278023 -49875859 - MLT1A2 LTR MaLR 0 374 1 513 359 63 41 chr20 22278023 22278067 -49875815 - L3 LINE CR1 -592 985 943 335 125 18 0 chr20 22278097 22278186 -49875696 - AluSq SINE Alu 0 315 226 1291 143 0 0 chr20 22278187 22278362 -49875520 - AluSq SINE Alu -138 175 1 355 343 22 59 chr20 22278376 22278647 -49875235 - L3 LINE CR1 -689 888 628 1102 273 19 29 chr20 22278933 22279310 -49874572 - LTR16C LTR ERVL -16 475 103 621 275 65 16 chr20 22279412 22279670 -49874212 + MLT1L LTR MaLR 246 596 -19 232 196 22 0 chr20 22279759 22279805 -49874077 + LTR16C LTR ERVL 445 491 0 545 222 161 24 chr20 22280010 22280258 -49873624 - MLT1K LTR MaLR -4 584 303 681 226 0 0 chr20 22280622 22280746 -49873136 + FLAM_A SINE Alu 5 128 -5 484 281 61 101 chr20 22280772 22281167 -49872715 - LTR16C LTR ERVL -30 461 83 315 300 56 0 chr20 22281964 22282054 -49871828 + MIR3 SINE MIR 63 157 -51 479 262 71 12 chr20 22282073 22282241 -49871641 - MER117 DNA MER1_type -19 178 1 1153 179 5 28 chr20 22282302 22282520 -49871362 + MER58A DNA MER1_type 1 213 -11 1188 220 124 14 chr20 22283523 22283878 -49870004 - REP3 LTR ERV -80 482 89 2073 144 161 7 chr20 22283887 22284317 -49869565 - MLT1D LTR MaLR -9 496 1 477 213 0 0 chr20 22284317 22284410 -49869472 - REP3 LTR ERV -469 93 1 323 296 21 7 chr20 22284410 22284518 -49869364 + LTR16A1 LTR ERVL 299 408 -49 292 314 57 0 chr20 22284770 22284875 -49869007 - LTR16B LTR ERVL -263 201 91 410 274 44 44 chr20 22284939 22285143 -49868739 - L2 LINE L2 -529 2785 2582 903 194 7 0 chr20 22285458 22285613 -49868269 + FRAM SINE Alu 1 153 -23 469 145 7 179 chr20 22285640 22285785 -49868097 + MER5A DNA MER1_type 70 189 0 787 214 26 13 chr20 22285792 22285946 -49867936 + MER5B DNA MER1_type 23 178 0 2253 111 0 3 chr20 22286205 22286502 -49867380 + AluSg SINE Alu 1 296 -14 297 231 86 0 chr20 22287399 22287516 -49866366 - LTR16C LTR ERVL -3 488 362 475 322 7 7 chr20 22287822 22287965 -49865917 + MIR SINE MIR 46 188 -74 3368 176 43 61 chr20 22287977 22288301 -49865581 + L1MB5 LINE L1 4922 5250 -924 2284 80 19 32 chr20 22288301 22288612 -49865270 - AluY SINE Alu -4 307 1 3368 176 43 61 chr20 22288612 22289410 -49864472 + L1MB5 LINE L1 5250 6033 -141 283 235 184 10 chr20 22289763 22289861 -49864021 - L2 LINE L2 -21 3251 3137 180 0 0 0 chr20 22289979 22289999 -49863883 + (GGGTG)n Simple_repeat Simple_repeat 5 24 0 368 329 150 21 chr20 22290208 22290494 -49863388 + LTR16C LTR ERVL 169 491 0 190 256 0 120 chr20 22291048 22291165 -49862717 - MIR SINE MIR -74 134 32 246 128 0 0 chr20 22291579 22291618 -49862264 + (TG)n Simple_repeat Simple_repeat 2 40 0 2060 150 40 0 chr20 22291789 22292089 -49861793 - AluSx SINE Alu 0 312 1 865 264 20 0 chr20 22292213 22292410 -49861472 + MER63A DNA MER1_type 1 201 -9 318 377 23 8 chr20 22292426 22292556 -49861326 - MIR SINE MIR -55 153 22 245 288 45 68 chr20 22292626 22292758 -49861124 + L2 LINE L2 2935 3063 -250 277 200 0 0 chr20 22292951 22293001 -49860881 - L2 LINE L2 -1 3312 3263 380 130 7 20 chr20 22293221 22293298 -49860584 - MLT1G1 LTR MaLR 0 595 466 1225 208 118 10 chr20 22293608 22293921 -49859961 - L1ME1 LINE L1 -4 6162 5816 230 275 14 43 chr20 22294327 22294396 -49859486 + MIR3 SINE MIR 93 159 -49 1042 292 35 44 chr20 22295516 22295948 -49857934 + L2 LINE L2 2886 3313 0 1406 141 168 32 chr20 22296059 22296399 -49857483 - LTR45B LTR ERV1 -101 388 3 314 349 52 23 chr20 22296401 22296573 -49857309 + MIR SINE MIR 20 196 -66 1939 193 40 24 chr20 22296592 22296924 -49856958 - MLT1C LTR MaLR -8 459 117 2666 118 41 14 chr20 22296924 22297341 -49856541 - MSTA LTR MaLR 0 428 1 1939 193 40 24 chr20 22297341 22297458 -49856424 - MLT1C LTR MaLR -350 117 3 204 49 49 49 chr20 22297472 22297513 -49856369 + (TTTTTA)n Simple_repeat Simple_repeat 1 41 0 22 0 0 0 chr20 22297516 22297538 -49856344 + AT_rich Low_complexity Low_complexity 1 22 0 272 200 24 12 chr20 22297616 22297682 -49856200 + T-rich Low_complexity Low_complexity 5 74 -16 10762 50 47 8 chr20 22297682 22299013 -49854869 - SVA Other Other 0 1386 3 272 200 24 12 chr20 22299013 22299031 -49854851 + T-rich Low_complexity Low_complexity 74 90 0 723 208 46 20 chr20 22299048 22299245 -49854637 - MER33 DNA MER1_type -93 231 30 396 227 103 0 chr20 22300399 22300496 -49853386 - LTR16C LTR ERVL -17 474 368 707 105 142 110 chr20 22300517 22300755 -49853127 + LTR29 LTR ERV1 1 199 -423 698 197 48 71 chr20 22300765 22300907 -49852975 + LTR29 LTR ERV1 389 524 -98 2056 132 36 7 chr20 22300907 22301210 -49852672 - AluSx SINE Alu 0 312 1 698 197 48 71 chr20 22301210 22301307 -49852575 + LTR29 LTR ERV1 524 622 0 841 244 54 27 chr20 22301307 22301565 -49852317 - LTR16C LTR ERVL -152 339 75 373 308 83 60 chr20 22301654 22302298 -49851584 - L2 LINE L2 -51 3221 2554 2234 78 0 0 chr20 22302394 22302665 -49851217 - AluSc SINE Alu -4 305 35 869 251 127 35 chr20 22302801 22303140 -49850742 - L1ME3 LINE L1 -171 5991 5622 263 273 52 0 chr20 22303593 22303670 -49850212 + MER103 DNA DNA 3 83 -83 673 253 90 80 chr20 22304046 22304252 -49849630 + L2 LINE L2 2933 3146 -167 2141 130 0 0 chr20 22304252 22304552 -49849330 - AluJb SINE Alu -12 300 1 673 253 90 80 chr20 22304552 22304721 -49849161 + L2 LINE L2 3146 3312 -1 551 248 152 33 chr20 22305068 22305370 -49848512 - L1MC4a LINE L1 -1765 6043 5706 380 223 10 0 chr20 22305395 22305498 -49848384 + GA-rich Low_complexity Low_complexity 1 104 0 194 197 49 66 chr20 22305547 22305608 -49848274 - L2 LINE L2 -8 3305 3246 458 291 52 6 chr20 22306252 22306424 -49847458 - LTR16C LTR ERVL -112 379 200 1003 76 0 0 chr20 22306512 22306630 -49847252 + AluSg SINE Alu 13 130 -180 1836 125 88 6 chr20 22306630 22306959 -49846923 + L1MB2 LINE L1 5814 6169 -2 278 280 59 51 chr20 22307196 22307314 -49846568 + MIR SINE MIR 129 247 -15 938 171 0 0 chr20 22307325 22307465 -49846417 + AluJ SINE Alu 6 145 -167 750 181 24 0 chr20 22307487 22307614 -49846268 + AluJ SINE Alu 121 250 -62 1091 167 0 90 chr20 22307614 22307679 -49846203 + AluJo SINE Alu 85 154 -158 2462 73 3 7 chr20 22307679 22307981 -49845901 + AluSp SINE Alu 1 301 -12 1091 167 0 90 chr20 22307981 22308148 -49845734 + AluJo SINE Alu 154 296 -16 281 227 133 16 chr20 22308986 22309114 -49844768 + L1ME4a LINE L1 5976 6118 -3 2684 185 43 30 chr20 22309400 22310010 -49843872 + L1MC4 LINE L1 7403 8020 -22 720 243 41 34 chr20 22310218 22310467 -49843415 - MIR SINE MIR -11 251 8 3068 112 14 40 chr20 22310556 22311056 -49842826 + L1MA6 LINE L1 5807 6293 -7 27 0 0 0 chr20 22311057 22311084 -49842798 + AT_rich Low_complexity Low_complexity 1 27 0 919 144 33 28 chr20 22311106 22311133 -49842749 - MER3 DNA MER1_type -28 181 156 1180 192 137 16 chr20 22311133 22311388 -49842494 + AluJo SINE Alu 1 286 -16 219 69 0 0 chr20 22311388 22311417 -49842465 + (TTAA)n Simple_repeat Simple_repeat 3 31 0 919 144 33 28 chr20 22311417 22311568 -49842314 - MER3 DNA MER1_type -52 157 1 669 95 0 0 chr20 22311972 22312056 -49841826 + AluS SINE Alu 2 85 -228 2166 142 0 0 chr20 22312408 22312710 -49841172 + AluSx SINE Alu 1 302 -10 255 333 0 0 chr20 22313335 22313413 -49840469 - L2 LINE L2 -6 3266 3189 2062 216 43 29 chr20 22313560 22313645 -49840237 + L1ME3 LINE L1 5317 5399 -763 2219 121 0 3 chr20 22313645 22313942 -49839940 + AluSx SINE Alu 1 296 -16 2062 216 43 29 chr20 22313942 22314415 -49839467 + L1ME3 LINE L1 5399 5883 -279 1860 168 0 28 chr20 22314424 22314745 -49839137 + AluJo SINE Alu 1 312 0 1020 169 4 64 chr20 22314746 22314982 -49838900 + L1ME3 LINE L1 5940 6161 -1 270 266 85 21 chr20 22315505 22315599 -49838283 + MER5B DNA MER1_type 1 100 -78 672 191 66 60 chr20 22315605 22315788 -49838094 + MER5A DNA MER1_type 3 186 -3 504 205 27 36 chr20 22315788 22315864 -49838018 - MER5A DNA MER1_type -112 77 3 596 90 27 99 chr20 22316551 22316590 -49837292 + U6 snRNA snRNA 1 41 -66 2009 129 42 0 chr20 22316590 22316877 -49837005 + AluSx SINE Alu 1 299 -13 596 90 27 99 chr20 22316877 22316948 -49836934 + U6 snRNA snRNA 41 103 -4 30 0 0 0 chr20 22316949 22316979 -49836903 + AT_rich Low_complexity Low_complexity 1 30 0 1654 229 37 11 chr20 22317078 22317433 -49836449 + L1ME2 LINE L1 5195 5561 -603 1982 170 0 6 chr20 22317433 22317745 -49836137 + AluJb SINE Alu 1 310 -2 1654 229 37 11 chr20 22317745 22317893 -49835989 + L1ME2 LINE L1 5561 5704 -460 1385 241 88 22 chr20 22317984 22318450 -49835432 + L1ME2 LINE L1 5678 6331 -3 2203 80 3 80 chr20 22318456 22318793 -49835089 + AluSx SINE Alu 1 311 -1 310 229 125 78 chr20 22318800 22318992 -49834890 + L1MDa LINE L1 1230 1430 -5110 335 306 64 17 chr20 22319550 22319723 -49834159 + L1MC4a LINE L1 5531 5711 -2097 2158 127 0 0 chr20 22319786 22320093 -49833789 - AluSq SINE Alu 0 307 1 2228 116 14 0 chr20 22320096 22320390 -49833492 - AluSx SINE Alu -14 298 1 278 81 177 0 chr20 22320417 22320479 -49833403 - MLT1A1 LTR MaLR -2 455 383 1436 158 9 4 chr20 22320497 22320725 -49833157 - AluJb SINE Alu -83 229 1 907 218 55 58 chr20 22320738 22321013 -49832869 - MLT1A1 LTR MaLR -68 297 24 343 248 44 29 chr20 22321060 22321197 -49832685 + L1MC4a LINE L1 5771 5909 -1899 2234 134 0 0 chr20 22321204 22321503 -49832379 - AluSx SINE Alu -13 299 1 1717 175 17 17 chr20 22321553 22321845 -49832037 + AluJb SINE Alu 1 292 -20 1075 154 0 0 chr20 22321876 22322025 -49831857 - AluSg/x SINE Alu -41 269 121 733 70 0 40 chr20 22322063 22322188 -49831694 + AluY SINE Alu 196 311 0 317 310 107 59 chr20 22322600 22322787 -49831095 + L1MC4a LINE L1 5989 6184 -1624 2211 90 4 0 chr20 22323674 22323952 -49829930 + AluSx SINE Alu 1 279 -33 180 77 0 0 chr20 22323952 22323978 -49829904 + (CA)n Simple_repeat Simple_repeat 1 26 0 734 161 240 65 chr20 22323978 22324238 -49829644 + MER41B LTR ERV1 105 443 -192 686 195 63 37 chr20 22324346 22324536 -49829346 + MER66A LTR ERV1 273 467 -11 586 264 128 16 chr20 22324544 22324794 -49829088 + L2 LINE L2 3035 3312 -1 1075 318 153 5 chr20 22324807 22325363 -49828519 - L2 LINE L2 -972 2342 1705 807 113 0 2 chr20 22325363 22325611 -49828271 + AluSx SINE Alu 1 308 -1 207 0 0 0 chr20 22325634 22325657 -49828225 + (TTTTTA)n Simple_repeat Simple_repeat 2 24 0 607 235 0 7 chr20 22325660 22325809 -49828073 + L1MB2 LINE L1 4706 4853 -1293 1413 250 89 20 chr20 22325821 22326361 -49827521 - L1MC4 LINE L1 -21 8021 7445 732 308 56 90 chr20 22326367 22326814 -49827068 - L2 LINE L2 -1594 1720 1304 3203 155 44 34 chr20 22326814 22327111 -49826771 + L1MB2 LINE L1 5511 5803 -368 2341 120 3 0 chr20 22327111 22327419 -49826463 + AluSx SINE Alu 1 309 -3 3203 155 44 34 chr20 22327419 22327774 -49826108 + L1MB2 LINE L1 5803 6170 -1 732 308 56 90 chr20 22327774 22328024 -49825858 - L2 LINE L2 -2010 1304 1047 424 254 38 33 chr20 22328100 22328270 -49825612 + MLT1H LTR MaLR 64 276 -273 368 214 46 118 chr20 22328425 22328474 -49825408 - L1ME4a LINE L1 -220 5901 5850 2325 103 3 3 chr20 22328474 22328775 -49825107 + AluSx SINE Alu 1 301 -11 368 214 46 118 chr20 22328775 22328963 -49824919 - L1ME4a LINE L1 -271 5850 5681 902 271 67 45 chr20 22329128 22329169 -49824713 + MLT1H LTR MaLR 77 116 -433 2002 114 3 36 chr20 22329169 22329477 -49824405 + AluSx SINE Alu 1 298 -14 902 271 67 45 chr20 22329477 22329881 -49824001 + MLT1H LTR MaLR 116 532 -17 1699 198 13 49 chr20 22329920 22330040 -49823842 + L1MD1 LINE L1 2 125 -5920 1569 162 63 21 chr20 22330040 22330324 -49823558 + AluJb SINE Alu 1 296 -16 1699 198 13 49 chr20 22330324 22330591 -49823291 + L1MD1 LINE L1 125 302 -5743 2233 133 0 0 chr20 22330591 22330893 -49822989 - AluSx SINE Alu -10 302 1 1699 198 13 49 chr20 22330893 22330974 -49822908 + L1MD1 LINE L1 302 384 -5661 4047 161 26 12 chr20 22330976 22331714 -49822168 + L1MC1 LINE L1 5586 6333 0 2593 52 7 0 chr20 22331722 22332028 -49821854 + AluY SINE Alu 2 309 -2 857 243 45 19 chr20 22332029 22332408 -49821474 + L1MD1 LINE L1 3461 3849 -2715 483 135 11 34 chr20 22332424 22332513 -49821369 + AluJ/FRAM SINE Alu 218 304 -8 4203 200 49 35 chr20 22332518 22332973 -49820909 + L1MD1 LINE L1 4858 5305 -1355 2311 75 4 0 chr20 22332973 22333285 -49820597 + AluSg SINE Alu 1 313 0 4203 200 49 35 chr20 22333285 22333544 -49820338 + L1MD1 LINE L1 5305 5559 -1101 1937 167 3 0 chr20 22333544 22333831 -49820051 + AluJo SINE Alu 1 288 -24 399 41 0 0 chr20 22333832 22333881 -49820001 + (TTA)n Simple_repeat Simple_repeat 2 50 0 4203 200 49 35 chr20 22333881 22334550 -49819332 + L1MD1 LINE L1 5559 6283 -377 1823 138 36 4 chr20 22334550 22334856 -49819026 + AluJb SINE Alu 1 315 0 4203 200 49 35 chr20 22334856 22335239 -49818643 + L1MD1 LINE L1 6283 6659 -1 334 261 32 70 chr20 22335217 22335377 -49818505 + HAL1 LINE L1 1487 1633 -1292 * 2324 188 50 45 chr20 22335377 22335810 -49818072 + MLT2B1 LTR ERVL 1 439 -81 2423 103 0 0 chr20 22335810 22336120 -49817762 + AluSx SINE Alu 1 310 -2 2324 188 50 45 chr20 22336120 22336203 -49817679 + MLT2B1 LTR ERVL 439 520 0 334 261 32 70 chr20 22336203 22336326 -49817556 + HAL1 LINE L1 1633 1759 -1166 398 283 42 0 chr20 22336399 22336444 -49817438 - HAL1 LINE L1 -2228 279 237 212 59 29 0 chr20 22336444 22336478 -49817404 + (CCCCCG)n Simple_repeat Simple_repeat 2 36 0 398 283 42 0 chr20 22336478 22336552 -49817330 - HAL1 LINE L1 -2270 237 155 381 332 41 32 chr20 22337157 22337377 -49816505 - L1MC4a LINE L1 -1867 5941 5720 940 247 39 48 chr20 22337401 22337668 -49816214 + MER5C DNA MER1_type 16 281 -43 2180 134 3 0 chr20 22337668 22337975 -49815907 + AluSx SINE Alu 3 310 -2 940 247 39 48 chr20 22337975 22338019 -49815863 + MER5C DNA MER1_type 281 324 0 206 283 38 0 chr20 22339095 22339148 -49814734 - L3 LINE CR1 -11 1566 1512 283 189 83 11 chr20 22339154 22339237 -49814645 + MIR SINE MIR 50 145 -63 869 271 43 8 chr20 22339363 22339618 -49814264 + LTR16C LTR ERVL 226 489 -2 2360 280 61 30 chr20 22340069 22341030 -49812852 + L1MC4a LINE L1 6789 7779 -29 264 327 72 20 chr20 22342234 22342387 -49811495 + MER5A DNA MER1_type 1 161 -28 246 203 58 29 chr20 22342775 22342844 -49811038 - MLT1K LTR MaLR -126 462 392 1506 135 0 9 chr20 22343621 22343843 -49810039 - AluJo SINE Alu -7 305 86 813 173 0 0 chr20 22343921 22344054 -49809828 - FLAM_C SINE Alu 0 133 1 270 0 0 0 chr20 22344114 22344144 -49809738 + (TG)n Simple_repeat Simple_repeat 2 31 0 207 256 120 105 chr20 22344329 22344462 -49809420 + MIR SINE MIR 11 145 -117 1411 230 74 9 chr20 22344467 22344846 -49809036 + MLT1H LTR MaLR 1 447 -102 2119 102 16 35 chr20 22344865 22345178 -49808704 + AluY SINE Alu 1 307 -4 905 231 156 54 chr20 22345218 22345591 -49808291 + L2 LINE L2 2903 3313 0 254 333 20 0 chr20 22346368 22346467 -49807415 - LTR16C LTR ERVL 0 491 391 414 287 0 19 chr20 22348116 22348224 -49805658 + MER5B DNA MER1_type 4 109 -69 231 260 130 14 chr20 22348235 22348381 -49805501 - L2 LINE L2 -338 2976 2814 517 202 13 178 chr20 22348396 22348548 -49805334 - MLT1G LTR MaLR -25 570 425 658 168 8 8 chr20 22348570 22348689 -49805193 - MER3 DNA MER1_type -5 204 86 981 111 7 0 chr20 22348704 22348839 -49805043 + AluJo SINE Alu 1 136 -176 734 205 58 0 chr20 22348860 22349031 -49804851 + MER53 DNA DNA 1 181 -8 335 268 12 0 chr20 22349043 22349125 -49804757 - MER3 DNA MER1_type -126 83 1 510 233 261 34 chr20 22349126 22349458 -49804424 - MLT1G1 LTR MaLR -208 382 10 424 271 68 17 chr20 22349468 22349645 -49804237 - L2 LINE L2 -492 2822 2637 1643 172 20 16 chr20 22351006 22351309 -49802573 + AluJo SINE Alu 9 312 0 575 230 143 0 chr20 22352644 22352805 -49801077 - AluJo SINE Alu -44 268 85 1570 117 102 30 chr20 22354155 22354421 -49799461 - MER1B DNA MER1_type -18 321 37 299 217 91 0 chr20 22354454 22354564 -49799318 + L1MC4 LINE L1 7464 7674 -321 945 128 0 0 chr20 22355866 22355999 -49797883 + AluSq/x SINE Alu 1 133 -180 3719 189 95 14 chr20 22356661 22357535 -49796347 + L1MA8 LINE L1 5347 6291 0 2590 53 0 0 chr20 22357636 22357935 -49795947 - AluY SINE Alu -12 299 1 22 35 0 0 chr20 22358696 22358725 -49795157 + AT_rich Low_complexity Low_complexity 1 29 0 1711 249 144 60 chr20 22359230 22360544 -49793338 + L1MC4 LINE L1 6521 8037 -5 352 70 0 0 chr20 22362817 22362860 -49791022 + MER4D LTR ERV1 760 802 -70 327 196 78 88 chr20 22363838 22363940 -49789942 + MER20 DNA MER1_type 66 166 -53 319 259 38 61 chr20 22364132 22364278 -49789604 - Charlie5 DNA MER1_type -2514 98 1 2509 74 0 0 chr20 22365032 22365331 -49788551 + AluY SINE Alu 1 299 -12 517 170 30 20 chr20 22366600 22366700 -49787182 + AluJb SINE Alu 11 111 -201 1842 149 0 4 chr20 22367804 22368085 -49785797 - AluSx SINE Alu -15 297 18 1428 156 67 73 chr20 22368853 22369167 -49784715 - AluJb SINE Alu 0 312 1 1202 123 8 2 chr20 22369549 22369793 -49784089 + AluSx SINE Alu 13 312 0 2388 77 6 13 chr20 22370244 22370557 -49783325 + AluY SINE Alu 1 311 0 180 0 0 0 chr20 22371093 22371113 -49782769 + (A)n Simple_repeat Simple_repeat 1 20 0 2191 88 16 42 chr20 22373268 22373403 -49780479 + AluSx SINE Alu 1 138 -174 2241 109 0 3 chr20 22373403 22373707 -49780175 + AluSg SINE Alu 1 303 -7 2191 88 16 42 chr20 22373707 22373878 -49780004 + AluSx SINE Alu 138 299 -13 23 0 0 0 chr20 22373945 22373968 -49779914 + AT_rich Low_complexity Low_complexity 1 23 0 2276 92 0 20 chr20 22375288 22375592 -49778290 - AluSg SINE Alu -12 298 1 1230 204 51 27 chr20 22376287 22376581 -49777301 + AluJo SINE Alu 1 301 -11 246 154 0 0 chr20 22376688 22376727 -49777155 - Alu SINE Alu -14 288 250 471 176 19 46 chr20 22377070 22377178 -49776704 + FLAM_A SINE Alu 34 138 -4 395 196 92 59 chr20 22378277 22378430 -49775452 + MER20 DNA MER1_type 58 215 -4 1372 143 0 10 chr20 22378527 22378778 -49775104 + AluJb SINE Alu 1 300 -12 1707 93 13 4 chr20 22379261 22379497 -49774385 + AluSg/x SINE Alu 66 303 -7 28 79 0 0 chr20 22381569 22381632 -49772250 + GC_rich Low_complexity Low_complexity 1 63 0 21 0 0 0 chr20 22382736 22382757 -49771125 + AT_rich Low_complexity Low_complexity 1 21 0 366 261 43 0 chr20 22383599 22383691 -49770191 - MIR SINE MIR -51 211 116 1252 190 0 5 chr20 22384903 22385124 -49768758 - AluJb SINE Alu -90 222 3 25 0 0 0 chr20 22385520 22385545 -49768337 + AT_rich Low_complexity Low_complexity 1 25 0 1921 119 11 8 chr20 22386152 22386420 -49767462 + AluSq SINE Alu 1 269 -44 1634 149 56 31 chr20 22386455 22386743 -49767139 + AluJo SINE Alu 1 295 -17 209 286 48 57 chr20 22386969 22387074 -49766808 + MIR SINE MIR 127 230 -32 2374 99 7 0 chr20 22387151 22387454 -49766428 - AluSx SINE Alu -7 305 1 2292 93 7 0 chr20 22388366 22388668 -49765214 + AluSg SINE Alu 1 304 -6 2228 114 27 0 chr20 22389215 22389513 -49764369 - AluSx SINE Alu -6 306 1 2173 113 3 0 chr20 22389734 22390050 -49763832 - AluSp SINE Alu 0 317 1 3515 110 34 36 chr20 22390109 22390186 -49763696 - MER41C LTR ERV1 0 554 478 2334 110 3 0 chr20 22390186 22390494 -49763388 + AluSx SINE Alu 4 312 0 3515 110 34 36 chr20 22390494 22390971 -49762911 - MER41C LTR ERV1 -76 478 1 815 87 188 27 chr20 22391105 22391254 -49762628 - MER30 DNA MER1_type -57 173 1 2483 88 0 0 chr20 22391286 22391594 -49762288 - AluSq SINE Alu -5 308 1 2011 153 0 6 chr20 22391853 22392167 -49761715 - AluSx SINE Alu 0 312 1 1757 179 0 10 chr20 22392172 22392469 -49761413 - AluJb SINE Alu -18 294 1 2403 60 6 29 chr20 22392490 22392805 -49761077 - AluY SINE Alu -3 308 1 1613 191 11 3 chr20 22392813 22393120 -49760762 - AluJb SINE Alu 0 309 1 2245 109 0 0 chr20 22393122 22393415 -49760467 - AluSq SINE Alu -20 293 1 25 0 0 0 chr20 22393590 22393615 -49760267 + AT_rich Low_complexity Low_complexity 1 25 0 2486 77 0 0 chr20 22393617 22393914 -49759968 + AluY SINE Alu 1 297 -14 326 148 0 19 chr20 22394189 22394243 -49759639 - MER4D LTR ERV1 -60 812 760 495 304 143 4 chr20 22394357 22394587 -49759295 + MIR SINE MIR 1 262 0 587 151 71 48 chr20 22394600 22394726 -49759156 - FLAM_C SINE Alu 0 133 5 342 0 0 0 chr20 22394738 22394776 -49759106 + (TG)n Simple_repeat Simple_repeat 2 39 0 1796 124 56 11 chr20 22394776 22395042 -49758840 - AluSx SINE Alu -34 278 1 352 263 102 5 chr20 22395067 22395179 -49758703 - L1MC/D LINE L1 -320 5801 5685 2023 138 30 0 chr20 22395212 22395509 -49758373 - AluSq SINE Alu -7 306 1 323 134 134 0 chr20 22395744 22395811 -49758071 - L1MC/D LINE L1 -2372 5436 5361 5710 151 41 20 chr20 22395863 22396357 -49757525 - L1MA7 LINE L1 -3 6288 5806 315 0 0 0 chr20 22396357 22396392 -49757490 + (TG)n Simple_repeat Simple_repeat 2 36 0 5710 151 41 20 chr20 22396392 22397398 -49756484 - L1MA7 LINE L1 -485 5806 4747 1262 166 93 8 chr20 22397406 22397653 -49756229 + Tigger3(Golem) DNA MER2_type 1 268 -2761 4576 104 55 14 chr20 22397714 22397842 -49756040 + Tigger3(Golem) DNA MER2_type 2288 2409 -620 2160 136 0 7 chr20 22397842 22398152 -49755730 + AluSx SINE Alu 1 308 -4 4576 104 55 14 chr20 22398152 22398231 -49755651 + Tigger3(Golem) DNA MER2_type 2409 2483 -546 2209 112 3 0 chr20 22398231 22398517 -49755365 + AluSq SINE Alu 1 287 -26 908 115 0 0 chr20 22398406 22398528 -49755354 + AluSp/q SINE Alu 177 298 -15 * 4576 104 55 14 chr20 22398517 22399021 -49754861 + Tigger3(Golem) DNA MER2_type 2483 3029 0 1540 136 15 64 chr20 22399021 22399160 -49754722 - L1MA7 LINE L1 -1406 4740 4596 2374 101 0 0 chr20 22399160 22399457 -49754425 - AluSq SINE Alu -15 298 2 1742 145 62 10 chr20 22399461 22399750 -49754132 - AluJb SINE Alu -8 304 1 1540 136 15 64 chr20 22399750 22399940 -49753942 - L1MA7 LINE L1 -1553 4593 4419 2060 115 31 0 chr20 22399998 22400285 -49753597 + AluSx SINE Alu 11 306 -6 1133 163 58 83 chr20 22400371 22400726 -49753156 + MER33 DNA MER1_type 1 324 0 716 164 8 39 chr20 22401003 22401131 -49752751 + FLAM_A SINE Alu 8 131 -11 2264 113 0 26 chr20 22401449 22401759 -49752123 + AluSx SINE Alu 1 302 -10 1796 142 57 7 chr20 22401910 22402191 -49751691 + AluJb SINE Alu 1 295 -17 2076 121 7 0 chr20 22402193 22402473 -49751409 + AluSx SINE Alu 1 282 -30 297 0 0 0 chr20 22402478 22402511 -49751371 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 540 152 0 15 chr20 22402520 22402769 -49751113 + AluJo SINE Alu 1 298 -14 2549 53 0 0 chr20 22404355 22404655 -49749227 + AluY SINE Alu 1 300 -11 2125 120 40 0 chr20 22404922 22405222 -49748660 - AluSx SINE Alu 0 312 1 2078 133 10 7 chr20 22405590 22405884 -49747998 + AluSx SINE Alu 9 303 -9 24 32 0 0 chr20 22406222 22406253 -49747629 + AT_rich Low_complexity Low_complexity 1 31 0 1990 148 10 3 chr20 22406949 22407247 -49746635 + AluJb SINE Alu 1 300 -12 1458 192 43 17 chr20 22407321 22407454 -49746428 + AluJo SINE Alu 1 129 -183 2341 73 0 0 chr20 22407454 22407729 -49746153 + AluY SINE Alu 24 298 -13 1458 192 43 17 chr20 22407729 22407897 -49745985 + AluJo SINE Alu 129 310 -2 2261 112 0 10 chr20 22407909 22408213 -49745669 + AluSq SINE Alu 7 307 -6 248 238 62 0 chr20 22408485 22408565 -49745317 - L1MC/D LINE L1 -2056 5752 5668 706 207 89 69 chr20 22408597 22408655 -49745227 + MIR SINE MIR 52 107 -155 2555 50 0 7 chr20 22408655 22408957 -49744925 - AluY SINE Alu -11 300 1 706 207 89 69 chr20 22408957 22409101 -49744781 + MIR SINE MIR 107 258 -4 316 261 177 23 chr20 22409121 22409251 -49744631 - L1MC/D LINE L1 -479 5642 5493 2017 148 0 22 chr20 22410093 22410411 -49743471 + AluJb SINE Alu 1 311 -1 267 255 182 52 chr20 22410635 22410827 -49743055 + MIR SINE MIR 1 217 -45 1412 98 5 5 chr20 22410986 22411211 -49742671 + AluSg/x SINE Alu 96 320 0 2156 129 3 3 chr20 22411290 22411593 -49742289 - AluSx SINE Alu -9 303 1 2990 140 30 30 chr20 22411934 22412469 -49741413 - MLT2B3 LTR ERVL -19 535 1 639 297 90 35 chr20 22412547 22413032 -49740850 - L2 LINE L2 -104 3209 2695 793 121 9 9 chr20 22413036 22413152 -49740730 + AluJo/FLAM SINE Alu 1 116 -186 2021 107 32 21 chr20 22413152 22413476 -49740406 - AluSp SINE Alu 0 327 1 22 0 0 0 chr20 22413476 22413498 -49740384 + AT_rich Low_complexity Low_complexity 1 22 0 249 139 0 0 chr20 22413498 22413541 -49740341 + (GAA)n Simple_repeat Simple_repeat 2 44 0 183 129 0 0 chr20 22413542 22413573 -49740309 + (CAG)n Simple_repeat Simple_repeat 3 33 0 232 276 129 66 chr20 22413581 22413658 -49740224 - L2 LINE L2 -633 2681 2610 1263 229 35 44 chr20 22413658 22413998 -49739884 + MER58B DNA MER1_type 2 338 -3 232 276 129 66 chr20 22413998 22414206 -49739676 - L2 LINE L2 -704 2610 2378 1233 155 4 69 chr20 22414266 22414498 -49739384 + AluJb SINE Alu 85 301 -11 575 260 88 54 chr20 22414615 22414946 -49738936 - MLT1H LTR MaLR -196 353 12 422 252 49 16 chr20 22414951 22415074 -49738808 + MIR SINE MIR 75 201 -61 317 208 64 140 chr20 22415142 22415232 -49738650 + MER113 DNA MER1_type? 4 99 -422 2398 95 0 7 chr20 22415232 22415536 -49738346 - AluSc SINE Alu -7 302 1 317 208 64 140 chr20 22415536 22415567 -49738315 + MER113 DNA MER1_type? 99 131 -390 2446 97 3 0 chr20 22415567 22415877 -49738005 + AluSp SINE Alu 1 311 -2 317 208 64 140 chr20 22415877 22416004 -49737878 + MER113 DNA MER1_type? 131 234 -287 687 109 0 154 chr20 22416004 22416160 -49737722 + AluJb SINE Alu 2 133 -179 2221 102 3 3 chr20 22416161 22416476 -49737406 + AluSx SINE Alu 1 315 0 2181 108 36 0 chr20 22416476 22416755 -49737127 + AluSx SINE Alu 2 290 -22 288 270 133 39 chr20 22416757 22416990 -49736892 + MER113 DNA MER1_type? 224 478 -43 273 274 120 51 chr20 22417118 22417293 -49736589 + MIR SINE MIR 63 249 -13 1788 176 0 13 chr20 22417946 22418248 -49735634 - AluJo SINE Alu -14 298 1 376 250 206 0 chr20 22418523 22418703 -49735179 + LTR16C LTR ERVL 275 491 0 2213 127 0 9 chr20 22419495 22419810 -49734072 - AluSx SINE Alu 0 312 1 831 156 0 15 chr20 22419814 22419949 -49733933 - FLAM_C SINE Alu 0 133 1 597 280 61 31 chr20 22419959 22420153 -49733729 - L2 LINE L2 0 3313 3108 2276 112 7 3 chr20 22420153 22420458 -49733424 + AluSx SINE Alu 1 306 -6 597 280 61 31 chr20 22420458 22420524 -49733358 - L2 LINE L2 -205 3108 3045 710 238 78 135 chr20 22420524 22421038 -49732844 - MLT1H1 LTR MaLR 0 555 101 338 252 102 62 chr20 22421135 22421361 -49732521 - L2 LINE L2 -337 2977 2743 231 286 50 66 chr20 22421449 22421631 -49732251 + L2 LINE L2 3058 3236 -77 25 0 0 28 chr20 22421776 22421793 -49732089 + AT_rich Low_complexity Low_complexity 1 17 -18 2392 87 3 0 chr20 22421793 22422091 -49731791 - AluY SINE Alu -12 299 1 25 0 0 28 chr20 22422091 22422109 -49731773 + AT_rich Low_complexity Low_complexity 17 35 0 818 127 8 0 chr20 22422526 22422644 -49731238 - FLAM_A SINE Alu -3 139 21 6696 68 14 44 chr20 22422677 22423660 -49730222 - SVA Other Other 0 1386 433 1873 95 47 15 chr20 22423682 22424093 -49729789 - SVA Other Other -520 866 519 923 158 0 7 chr20 22424094 22424233 -49729649 - AluJo SINE Alu -169 143 6 210 94 0 0 chr20 22424237 22424269 -49729613 + L2 LINE L2 2453 2484 -830 1550 240 79 24 chr20 22424346 22424853 -49729029 + L2 LINE L2 2488 3022 -291 216 200 0 0 chr20 22425193 22425248 -49728634 + GA-rich Low_complexity Low_complexity 1 55 0 22 0 0 0 chr20 22426050 22426072 -49727810 + AT_rich Low_complexity Low_complexity 1 22 0 1785 141 67 7 chr20 22426164 22426447 -49727435 + AluJo SINE Alu 1 300 -12 700 237 94 84 chr20 22426504 22426587 -49727295 + MLT1G1 LTR MaLR 3 84 -506 2169 135 7 0 chr20 22426587 22426890 -49726992 - AluSx SINE Alu -7 305 1 700 237 94 84 chr20 22426890 22427315 -49726567 + MLT1G1 LTR MaLR 84 515 -75 632 228 117 61 chr20 22427354 22427551 -49726331 + L2 LINE L2 3106 3313 0 250 290 52 52 chr20 22427684 22427861 -49726021 + L1P LINE L1 4926 5102 -1044 201 150 0 25 chr20 22427880 22427893 -49725989 + (GAAA)n Simple_repeat Simple_repeat 2 14 -26 859 120 23 23 chr20 22427893 22428026 -49725856 + FLAM_C SINE Alu 1 133 0 201 150 0 25 chr20 22428026 22428052 -49725830 + (GAAA)n Simple_repeat Simple_repeat 14 40 0 2587 69 0 0 chr20 22428129 22428435 -49725447 + AluSg SINE Alu 1 306 -4 522 228 114 15 chr20 22428557 22428624 -49725258 - MER2 DNA MER2_type -1 344 285 1885 155 76 0 chr20 22428624 22428914 -49724968 + AluJb SINE Alu 1 312 0 522 228 114 15 chr20 22428914 22429048 -49724834 - MER2 DNA MER2_type -60 285 123 843 164 0 0 chr20 22429049 22429171 -49724711 + FLAM_C SINE Alu 1 122 -11 219 114 0 0 chr20 22429181 22429216 -49724666 + (TG)n Simple_repeat Simple_repeat 2 36 0 319 183 0 118 chr20 22429216 22429298 -49724584 - L1MC4 LINE L1 -1376 6666 6595 397 228 22 43 chr20 22429375 22429467 -49724415 - L1MC4 LINE L1 -1339 6703 6614 354 304 36 0 chr20 22429399 22429509 -49724373 + L1MC4 LINE L1 6614 6703 -1339 * 656 125 8 94 chr20 22429510 22429552 -49724330 - MER2 DNA MER2_type -214 131 87 2079 128 3 3 chr20 22429552 22429849 -49724033 - AluJb SINE Alu -15 297 1 656 125 8 94 chr20 22429849 22429934 -49723948 - MER2 DNA MER2_type -258 87 15 582 277 94 9 chr20 22429939 22430163 -49723719 + L1MC/D LINE L1 5360 5602 -2206 331 229 83 55 chr20 22430220 22430329 -49723553 + L1MC4a LINE L1 5274 5385 -2423 844 251 20 0 chr20 22430338 22430541 -49723341 + L1MC4a LINE L1 5620 5826 -1982 1214 124 6 0 chr20 22430544 22430713 -49723169 - AluSg/x SINE Alu -14 298 129 23 0 0 0 chr20 22430809 22430832 -49723050 + AT_rich Low_complexity Low_complexity 1 23 0 258 264 6 99 chr20 22430832 22431014 -49722868 + L1MC4a LINE L1 5876 6040 -1768 1193 170 179 20 chr20 22431275 22431616 -49722266 + LTR16A1 LTR ERVL 63 457 0 1023 251 82 35 chr20 22432230 22432541 -49721341 + LTR16C LTR ERVL 104 436 -55 2439 82 7 0 chr20 22432541 22432844 -49721038 - AluSq SINE Alu -8 305 1 1023 251 82 35 chr20 22432844 22432898 -49720984 + LTR16C LTR ERVL 436 486 -5 238 255 174 27 chr20 22433134 22433283 -49720599 + MLT1J2 LTR MaLR 258 428 -22 369 94 0 0 chr20 22433293 22433371 -49720511 - AluSc SINE Alu 0 304 227 827 105 0 0 chr20 22433371 22433476 -49720406 - AluSq/x SINE Alu -208 105 1 875 275 139 28 chr20 22433504 22433999 -49719883 + MLT1K LTR MaLR 23 572 -16 277 266 16 0 chr20 22434857 22434921 -49718961 + GA-rich Low_complexity Low_complexity 1 65 0 275 305 29 0 chr20 22435137 22435311 -49718571 + (TGG)n Simple_repeat Simple_repeat 2 180 0 290 295 35 0 chr20 22435500 22435673 -49718209 + (TGG)n Simple_repeat Simple_repeat 2 180 0 1531 148 0 0 chr20 22436917 22437127 -49716755 + AluJb SINE Alu 86 295 -17 219 154 0 26 chr20 22437708 22437747 -49716135 + CT-rich Low_complexity Low_complexity 2 39 0 243 0 0 0 chr20 22438244 22438271 -49715611 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2186 100 7 3 chr20 22438376 22438666 -49715216 + AluSx SINE Alu 1 291 -21 1205 255 99 15 chr20 22438666 22439070 -49714812 - LTR16C LTR ERVL -4 487 50 369 268 56 73 chr20 22439360 22439473 -49714409 + MER5B DNA MER1_type 1 111 -67 2525 67 0 0 chr20 22439473 22439771 -49714111 - AluY SINE Alu -13 298 1 369 268 56 73 chr20 22439771 22439836 -49714046 + MER5B DNA MER1_type 111 176 -2 1292 128 10 5 chr20 22439999 22440202 -49713680 + L1PA16 LINE L1 5953 6156 -10 2156 115 0 0 chr20 22440343 22440661 -49713221 + AluSx SINE Alu 8 325 0 2490 70 0 0 chr20 22440684 22440985 -49712897 - AluY SINE Alu -10 301 1 2047 140 0 0 chr20 22441249 22441567 -49712315 - AluSx SINE Alu 0 318 1 22 0 0 0 chr20 22441579 22441601 -49712281 + AT_rich Low_complexity Low_complexity 1 22 0 1984 145 0 0 chr20 22441601 22441918 -49711964 + AluSx SINE Alu 1 317 0 2215 114 0 7 chr20 22442113 22442419 -49711463 - AluSx SINE Alu -8 304 1 327 218 26 13 chr20 22442453 22442531 -49711351 + MER5B DNA MER1_type 95 173 -5 1956 127 13 10 chr20 22442791 22443090 -49710792 + AluJo SINE Alu 5 304 -8 186 328 126 0 chr20 22444277 22444396 -49709486 + MIR SINE MIR 62 195 -67 1599 106 0 22 chr20 22444462 22444688 -49709194 + AluSg/x SINE Alu 81 301 -9 389 291 49 39 chr20 22445095 22445298 -49708584 + L1ME3A LINE L1 5533 5737 -2071 183 80 0 0 chr20 22445298 22445323 -49708559 + (GGAA)n Simple_repeat Simple_repeat 1 25 0 684 167 22 22 chr20 22445326 22445506 -49708376 + GA-rich Low_complexity Low_complexity 1 180 0 2242 107 0 0 chr20 22445584 22445897 -49707985 - AluSx SINE Alu 0 312 1 203 278 0 42 chr20 22446744 22446816 -49707066 - MER5A DNA MER1_type -112 77 9 585 228 201 69 chr20 22447193 22447597 -49706285 + LTR16A1 LTR ERVL 1 457 0 255 125 0 0 chr20 22447702 22447742 -49706140 + (TC)n Simple_repeat Simple_repeat 2 41 0 189 0 0 0 chr20 22447742 22447763 -49706119 + (CA)n Simple_repeat Simple_repeat 1 21 0 2001 141 0 22 chr20 22448262 22448575 -49705307 + AluSx SINE Alu 4 309 -3 968 241 28 34 chr20 22448925 22449102 -49704780 - MER33 DNA MER1_type -2262 323 147 2360 105 3 0 chr20 22449102 22449406 -49704476 + AluSp SINE Alu 1 305 -8 968 241 28 34 chr20 22449406 22449552 -49704330 - MER33 DNA MER1_type -2438 147 2 2570 36 0 0 chr20 22449945 22450252 -49703630 + AluY SINE Alu 1 307 -4 307 301 191 0 chr20 22450352 22450488 -49703394 + MIR SINE MIR 20 181 -81 864 224 40 18 chr20 22450821 22451044 -49702838 + LTR16C LTR ERVL 264 491 0 275 337 11 0 chr20 22451056 22451148 -49702734 + L2 LINE L2 2962 3054 -218 313 250 117 61 chr20 22451367 22451563 -49702319 - MIR SINE MIR 0 262 56 1005 229 39 36 chr20 22452131 22452411 -49701471 + L1ME3A LINE L1 5884 6164 -6 1618 138 81 34 chr20 22452430 22452728 -49701154 + AluJo SINE Alu 1 312 0 1732 162 7 3 chr20 22453018 22453314 -49700568 - AluJo SINE Alu -15 297 1 429 232 0 0 chr20 22453362 22453504 -49700378 + (GGATG)n Simple_repeat Simple_repeat 4 145 0 214 350 88 0 chr20 22453564 22453701 -49700181 - L2 LINE L2 -527 2787 2639 352 283 17 8 chr20 22454116 22454236 -49699646 - MIR SINE MIR -114 148 28 1887 73 4 8 chr20 22454251 22454498 -49699384 - AluSg SINE Alu -9 301 56 2183 113 0 7 chr20 22454994 22455303 -49698579 - AluSq SINE Alu -6 307 1 498 195 412 19 chr20 22455303 22455395 -49698487 + MLT1J LTR MaLR 17 72 -439 2238 147 55 29 chr20 22455395 22455585 -49698297 + MSTB LTR MaLR 1 184 -242 2243 90 7 0 chr20 22455585 22455885 -49697997 + AluSp SINE Alu 1 302 -11 2238 147 55 29 chr20 22455885 22456109 -49697773 + MSTB LTR MaLR 184 426 0 498 195 412 19 chr20 22456109 22456278 -49697604 + MLT1J LTR MaLR 72 381 -130 696 240 183 50 chr20 22456359 22456742 -49697140 + MLT1H1 LTR MaLR 45 478 -77 194 276 58 35 chr20 22456762 22456849 -49697033 - MIR SINE MIR -99 109 21 434 255 161 25 chr20 22457195 22457356 -49696526 - MER5A DNA MER1_type 0 189 7 349 267 184 53 chr20 22457649 22458024 -49695858 - L2 LINE L2 -11 3261 2838 808 145 0 15 chr20 22458727 22458858 -49695024 - FLAM_C SINE Alu -3 140 12 194 186 23 23 chr20 22459023 22459066 -49694816 - MIR SINE MIR -113 149 107 357 178 84 0 chr20 22459353 22459460 -49694422 + L1MC4a LINE L1 5710 5825 -1983 539 200 156 11 chr20 22459474 22459686 -49694196 + MLT1F LTR MaLR 299 536 -6 276 337 22 0 chr20 22460055 22460147 -49693735 + MIR3 SINE MIR 74 167 -41 415 245 37 98 chr20 22460151 22460314 -49693568 + MIR SINE MIR 2 154 -108 2104 114 10 0 chr20 22460324 22460623 -49693259 + AluSq SINE Alu 4 305 -8 2332 100 0 0 chr20 22460662 22460972 -49692910 + AluSx SINE Alu 1 310 -2 2077 112 10 0 chr20 22461096 22461392 -49692490 + AluSx SINE Alu 1 299 -13 595 268 34 64 chr20 22461484 22461535 -49692347 + MER46C DNA MER2_type 2 53 -285 1580 152 76 0 chr20 22461535 22461823 -49692059 + AluSx SINE Alu 1 308 0 595 268 34 64 chr20 22461823 22462005 -49691877 + MER46C DNA MER2_type 53 229 -109 291 296 46 28 chr20 22462756 22462864 -49691018 - MIR SINE MIR -129 133 24 231 269 134 60 chr20 22463058 22463192 -49690690 + MIR3 SINE MIR 33 176 -32 231 158 88 18 chr20 22463557 22463614 -49690268 + LTR67 LTR ERVL 481 541 -16 779 192 0 0 chr20 22464185 22464315 -49689567 + FLAM_C SINE Alu 2 131 -2 777 250 47 55 chr20 22464326 22464690 -49689192 + L1MC5 LINE L1 6957 7317 -644 647 240 36 26 chr20 22464706 22464837 -49689045 + MER3 DNA MER1_type 3 138 -71 1990 106 0 24 chr20 22464837 22465130 -49688752 - AluSx SINE Alu -26 286 1 647 240 36 26 chr20 22465130 22465190 -49688692 + MER3 DNA MER1_type 138 196 -13 1217 246 165 11 chr20 22465195 22465655 -49688227 + L1MC5 LINE L1 7334 7864 -97 387 314 58 0 chr20 22466363 22466500 -49687382 - MIR SINE MIR -48 214 70 2150 106 0 3 chr20 22466509 22466810 -49687072 + AluSx SINE Alu 1 300 -12 603 174 99 0 chr20 22467240 22467361 -49686521 - MIR SINE MIR -69 193 61 2143 80 3 71 chr20 22467551 22467887 -49685995 + AluSp SINE Alu 1 313 0 1511 93 5 14 chr20 22469521 22469735 -49684147 - AluSg/x SINE Alu -24 288 77 302 198 77 55 chr20 22469742 22469833 -49684049 + L1MC5 LINE L1 7452 7544 -417 426 190 253 17 chr20 22469843 22470017 -49683865 + L1MC5 LINE L1 7711 7925 -36 203 318 149 7 chr20 22470056 22470210 -49683672 + L2 LINE L2 1734 1909 -1405 1722 139 68 0 chr20 22470223 22470503 -49683379 - AluSx SINE Alu -13 299 1 265 342 61 9 chr20 22470574 22470688 -49683194 + MIR SINE MIR 33 152 -110 759 257 147 47 chr20 22470699 22471147 -49682735 - MLT1H1 LTR MaLR 0 555 63 247 93 37 0 chr20 22471217 22471239 -49682643 + CT-rich Low_complexity Low_complexity 2 22 -35 2355 81 0 7 chr20 22471239 22471547 -49682335 - AluY SINE Alu -5 306 1 247 93 37 0 chr20 22471547 22471578 -49682304 + CT-rich Low_complexity Low_complexity 22 57 0 1274 126 0 0 chr20 22471706 22471889 -49681993 - AluJo SINE Alu -125 187 5 2579 144 52 18 chr20 22471893 22472242 -49681640 - L1MA5 LINE L1 -47 6253 5883 2126 118 0 0 chr20 22472242 22472539 -49681343 - AluSq SINE Alu -16 297 1 2579 144 52 18 chr20 22472539 22472647 -49681235 - L1MA5 LINE L1 -417 5883 5780 826 193 10 69 chr20 22472649 22472851 -49681031 - MLT1D LTR MaLR -315 190 1 1289 286 43 11 chr20 22472993 22473430 -49680452 + LTR16B LTR ERVL 3 453 -11 1153 224 26 55 chr20 22473441 22473684 -49680198 + MER113 DNA MER1_type? 108 340 -181 1839 159 0 7 chr20 22473684 22474005 -49679877 + AluJb SINE Alu 1 312 0 1153 224 26 55 chr20 22474005 22474105 -49679777 + MER113 DNA MER1_type? 340 441 -80 2181 115 0 0 chr20 22474656 22474961 -49678921 - AluSg SINE Alu -5 305 1 2340 87 0 3 chr20 22474966 22475275 -49678607 - AluSx SINE Alu -4 308 1 264 200 173 13 chr20 22475563 22475638 -49678244 - MLT1K LTR MaLR -180 408 322 1951 127 0 0 chr20 22476176 22476482 -49677400 + AluSx SINE Alu 1 306 0 303 311 86 33 chr20 22476521 22476672 -49677210 + MIR SINE MIR 103 261 -1 1797 115 66 28 chr20 22476673 22476961 -49676921 - AluSx SINE Alu -13 299 1 1636 207 16 76 chr20 22477033 22477468 -49676414 + MLT2B3 LTR ERVL 1 409 -145 1851 134 14 3 chr20 22477677 22477969 -49675913 + AluSg SINE Alu 1 295 -15 356 188 0 12 chr20 22477969 22478049 -49675833 + GA-rich Low_complexity Low_complexity 1 79 0 189 0 0 0 chr20 22478190 22478211 -49675671 + (GGGA)n Simple_repeat Simple_repeat 4 24 0 1097 151 26 93 chr20 22478213 22478273 -49675609 - MER33 DNA MER1_type -2284 340 278 1009 180 0 6 chr20 22478273 22478440 -49675442 + FAM SINE Alu 1 166 -9 2776 13 0 0 chr20 22478449 22478763 -49675119 + AluYb8 SINE Alu 1 314 -4 1097 151 26 93 chr20 22478763 22479023 -49674859 - MER33 DNA MER1_type -2354 270 2 207 184 0 0 chr20 22479079 22479117 -49674765 + GA-rich Low_complexity Low_complexity 1 38 0 2100 87 31 3 chr20 22479186 22479473 -49674409 + AluSx SINE Alu 1 295 -17 644 322 62 42 chr20 22479630 22480149 -49673733 - LTR67 LTR ERVL -27 530 2 2283 92 0 0 chr20 22480192 22480495 -49673387 + AluSx SINE Alu 1 303 -9 3487 124 3 13 chr20 22480503 22481112 -49672770 + L1MA9 LINE L1 5182 5788 -524 27 0 0 0 chr20 22481121 22481148 -49672734 + AT_rich Low_complexity Low_complexity 1 27 0 1062 123 0 6 chr20 22481148 22481310 -49672572 - AluSg/x SINE Alu -22 288 128 2712 131 78 18 chr20 22481380 22481893 -49671989 + L1MA9 LINE L1 5759 6302 -10 222 255 7 57 chr20 22482160 22482301 -49671581 + G-rich Low_complexity Low_complexity 1 134 0 243 146 0 0 chr20 22482448 22482489 -49671393 + (CTG)n Simple_repeat Simple_repeat 3 43 0 21 0 0 0 chr20 22483419 22483440 -49670442 + GC_rich Low_complexity Low_complexity 1 21 0 1555 214 20 3 chr20 22484016 22484367 -49669515 - THE1-int LTR MaLR -449 1131 775 1013 196 10 14 chr20 22484467 22484676 -49669206 - AluJo SINE Alu -104 208 1 1822 129 0 45 chr20 22484773 22484890 -49668992 + AluSq SINE Alu 1 122 -191 2346 80 0 6 chr20 22484890 22485201 -49668681 + AluY SINE Alu 1 309 -2 1822 129 0 45 chr20 22485201 22485393 -49668489 + AluSq SINE Alu 122 296 -17 541 220 18 0 chr20 22486869 22486978 -49666904 - MIR SINE MIR -88 174 64 213 39 0 0 chr20 22487082 22487108 -49666774 + (A)n Simple_repeat Simple_repeat 1 26 0 1205 269 80 56 chr20 22487316 22487856 -49666026 + Charlie1a DNA MER1_type 1 553 -902 914 261 179 11 chr20 22487850 22488031 -49665851 + Charlie1a DNA MER1_type 706 855 -1906 * 1661 179 20 0 chr20 22488031 22488333 -49665549 - AluJb SINE Alu -4 308 1 914 261 179 11 chr20 22488333 22488587 -49665295 + Charlie1a DNA MER1_type 855 1214 -241 323 199 99 84 chr20 22488658 22488789 -49665093 + Charlie1a DNA MER1_type 1317 1449 -6 944 123 0 0 chr20 22489095 22489249 -49664633 + AluSp/q SINE Alu 156 309 0 2022 133 3 7 chr20 22489622 22489930 -49663952 + AluSx SINE Alu 1 307 -5 704 144 144 0 chr20 22490571 22490689 -49663193 - AluSq/x SINE Alu -176 136 2 982 109 7 0 chr20 22490701 22490848 -49663034 - L1MA4 LINE L1 -4 6296 6149 1773 195 162 5 chr20 22490931 22491107 -49662775 - L1MD2 LINE L1 -6 6353 6206 222 37 0 0 chr20 22491107 22491134 -49662748 + (TG)n Simple_repeat Simple_repeat 2 28 0 1773 195 162 5 chr20 22491134 22491426 -49662456 - L1MD2 LINE L1 -153 6206 5807 2052 117 3 0 chr20 22491429 22491729 -49662153 - AluSx SINE Alu -11 301 1 27 49 0 0 chr20 22491794 22491835 -49662047 + AT_rich Low_complexity Low_complexity 1 41 0 262 268 5 116 chr20 22491908 22492106 -49661776 - L1MD2 LINE L1 -368 5794 5619 909 260 92 64 chr20 22492142 22492505 -49661377 - L1MD2 LINE L1 -663 5507 5155 2153 93 0 10 chr20 22492505 22492807 -49661075 - AluSc SINE Alu -10 299 1 909 260 92 64 chr20 22492807 22493450 -49660432 - L1MD2 LINE L1 -1015 5155 4475 829 184 0 11 chr20 22493456 22493635 -49660247 - AluJb SINE Alu -1 311 135 463 288 42 71 chr20 22493640 22493812 -49660070 - L1MD2 LINE L1 -1674 4472 4296 2202 88 3 3 chr20 22493812 22494107 -49659775 - AluSc SINE Alu -14 295 1 463 288 42 71 chr20 22494107 22494341 -49659541 - L1MD2 LINE L1 -1850 4296 4078 2247 79 0 3 chr20 22494434 22494725 -49659157 + AluSp SINE Alu 6 295 -18 934 273 48 56 chr20 22494836 22495213 -49658669 + L3 LINE CR1 1197 1570 -7 1564 101 14 0 chr20 22495704 22495922 -49657960 + AluSq SINE Alu 1 221 -92 463 146 79 0 chr20 22496022 22496111 -49657771 + MER46B DNA MER2_type 83 53 -183 654 202 16 8 chr20 22496115 22496239 -49657643 + FLAM_C SINE Alu 2 126 -7 2224 66 0 3 chr20 22496258 22496544 -49657338 + AluY SINE Alu 26 310 -1 1171 150 0 5 chr20 22496548 22496735 -49657147 + MER46B DNA MER2_type 48 233 -3 833 121 0 0 chr20 22497409 22497533 -49656349 + AluSq/x SINE Alu 1 124 -188 255 146 0 0 chr20 22497533 22497581 -49656301 + AluSc SINE Alu 252 299 0 1811 130 10 30 chr20 22497785 22497925 -49655957 + AluSx SINE Alu 1 142 -170 1979 128 3 3 chr20 22497925 22498230 -49655652 + AluSx SINE Alu 1 305 -7 1811 130 10 30 chr20 22498230 22498389 -49655493 + AluSx SINE Alu 142 294 -18 693 232 5 60 chr20 22498399 22498584 -49655298 + FRAM SINE Alu 1 175 -1 2171 176 43 6 chr20 22498856 22499328 -49654554 + L1MC1 LINE L1 5384 5851 -482 34 0 0 0 chr20 22499428 22499462 -49654420 + AT_rich Low_complexity Low_complexity 1 34 0 2020 197 127 65 chr20 22499758 22500210 -49653672 + L1ME2 LINE L1 4651 5073 -1091 1707 178 0 37 chr20 22500210 22500531 -49653351 + AluJo SINE Alu 4 312 0 2020 197 127 65 chr20 22500531 22500637 -49653245 + L1ME2 LINE L1 5073 5171 -993 2428 72 3 7 chr20 22500637 22500942 -49652940 + AluY SINE Alu 1 304 -7 2020 197 127 65 chr20 22500942 22501126 -49652756 + L1ME2 LINE L1 5171 5342 -822 1712 167 3 23 chr20 22501126 22501431 -49652451 + AluSx SINE Alu 3 301 -11 1975 97 45 39 chr20 22501440 22501545 -49652337 + AluSp SINE Alu 1 104 -209 2379 48 7 3 chr20 22501545 22501834 -49652048 + AluY SINE Alu 1 290 -21 1975 97 45 39 chr20 22501834 22502037 -49651845 + AluSp SINE Alu 104 311 -2 2020 197 127 65 chr20 22502037 22502448 -49651434 + L1ME2 LINE L1 5349 5899 -265 2164 128 0 7 chr20 22502602 22502908 -49650974 + AluSx SINE Alu 7 310 -2 916 211 0 0 chr20 22502921 22503087 -49650795 + AluJb SINE Alu 133 298 -14 206 354 12 12 chr20 22503538 22503620 -49650262 + L2 LINE L2 3185 3266 -6 2239 117 0 0 chr20 22503638 22503947 -49649935 + AluSx SINE Alu 1 309 -3 1279 111 0 11 chr20 22503947 22504128 -49649754 + AluSg/x SINE Alu 134 312 0 2134 120 3 0 chr20 22504149 22504450 -49649432 + AluSq SINE Alu 1 302 -11 21 36 0 0 chr20 22505245 22505273 -49648609 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr20 22506338 22506361 -49647521 + AT_rich Low_complexity Low_complexity 1 23 0 1754 173 17 3 chr20 22506792 22507092 -49646790 + AluJo SINE Alu 1 304 -8 21 71 0 0 chr20 22507753 22507795 -49646087 + AT_rich Low_complexity Low_complexity 1 42 0 1737 243 34 44 chr20 22508202 22508356 -49645526 + L1MB4 LINE L1 4538 4692 -1454 2184 115 20 0 chr20 22508356 22508651 -49645231 - AluSx SINE Alu -11 301 1 1737 243 34 44 chr20 22508651 22509060 -49644822 + L1MB4 LINE L1 4692 5095 -1051 * 5024 50 2 2 chr20 22509051 22509694 -49644188 - L1PA5 LINE L1 -2587 3559 2917 15950 48 4 13 chr20 22509694 22512321 -49641561 + L1PA5 LINE L1 3535 6154 0 1762 201 23 39 chr20 22512323 22512574 -49641308 + L1MB4 LINE L1 5079 5333 -850 2290 97 3 3 chr20 22512574 22512873 -49641009 + AluSp SINE Alu 1 299 -14 1762 201 23 39 chr20 22512873 22513057 -49640825 + L1MB4 LINE L1 5333 5500 -683 2977 106 41 10 chr20 22513057 22513472 -49640410 - MSTA LTR MaLR 0 428 1 1762 201 23 39 chr20 22513472 22513609 -49640273 + L1MB4 LINE L1 5500 5638 -545 237 194 0 104 chr20 22513610 22513677 -49640205 - Tigger5 DNA MER2_type -22 2301 2242 2241 109 0 0 chr20 22513682 22513976 -49639906 - AluSx SINE Alu -16 296 3 2102 115 35 0 chr20 22513978 22514266 -49639616 - AluSx SINE Alu -14 298 1 470 167 0 0 chr20 22514270 22514342 -49639540 + Tigger5 DNA MER2_type 2249 2320 -3 * 488 190 0 0 chr20 22514342 22514420 -49639462 - Tigger5 DNA MER2_type -2245 78 1 3233 149 17 9 chr20 22514420 22514951 -49638931 + L1MB4 LINE L1 5645 6179 -1 1676 275 101 24 chr20 22515124 22515736 -49638146 + HAL1b LINE L1 89 652 -696 2213 116 7 0 chr20 22515736 22516039 -49637843 + AluSx SINE Alu 1 305 -7 1676 275 101 24 chr20 22516039 22516135 -49637747 + HAL1b LINE L1 652 739 -609 2476 132 79 17 chr20 22516135 22516538 -49637344 + MSTA LTR MaLR 1 428 0 1676 275 101 24 chr20 22516538 22516587 -49637295 + HAL1b LINE L1 739 906 -442 236 118 59 20 chr20 22516710 22516726 -49637156 + GA-rich Low_complexity Low_complexity 1 15 -38 2035 146 13 0 chr20 22516726 22517027 -49636855 + AluSx SINE Alu 1 305 -7 236 118 59 20 chr20 22517027 22517061 -49636821 + GA-rich Low_complexity Low_complexity 15 53 0 4479 194 25 23 chr20 22517079 22518010 -49635872 + L1MC3 LINE L1 6171 7103 -682 236 219 0 16 chr20 22519337 22519401 -49634481 + A-rich Low_complexity Low_complexity 2 64 0 2466 94 0 0 chr20 22519536 22519845 -49634037 - AluSx SINE Alu -3 309 1 2080 118 38 0 chr20 22519906 22520195 -49633687 - AluSx SINE Alu -12 300 1 266 235 0 0 chr20 22520258 22520326 -49633556 + A-rich Low_complexity Low_complexity 1 68 0 1424 149 21 8 chr20 22520460 22520695 -49633187 + AluSg/x SINE Alu 75 312 0 981 84 65 39 chr20 22521642 22521823 -49632059 + AluSg/x SINE Alu 127 311 0 23 0 0 0 chr20 22522581 22522604 -49631278 + GC_rich Low_complexity Low_complexity 1 23 0 188 350 0 38 chr20 22523291 22523371 -49630511 - L2 LINE L2 -2 3270 3194 382 295 52 40 chr20 22523910 22524083 -49629799 + MER5B DNA MER1_type 4 178 0 432 0 0 0 chr20 22524139 22524187 -49629695 + (TG)n Simple_repeat Simple_repeat 2 49 0 305 256 33 33 chr20 22524314 22524404 -49629478 - MIR SINE MIR -3 259 170 2196 97 3 29 chr20 22525039 22525348 -49628534 + AluSx SINE Alu 1 301 -11 737 149 130 13 chr20 22525468 22525622 -49628260 + MER2 DNA MER2_type 65 236 -109 * 1073 177 45 36 chr20 22525620 22525726 -49628156 + MER2 DNA MER2_type 120 224 -121 2459 66 3 0 chr20 22525726 22526027 -49627855 + AluY SINE Alu 1 302 -9 1073 177 45 36 chr20 22526027 22526140 -49627742 + MER2 DNA MER2_type 224 341 -4 908 181 100 35 chr20 22526166 22526426 -49627456 - L1MC4a LINE L1 -1371 6437 6161 2129 100 17 10 chr20 22526566 22526866 -49627016 + AluSq SINE Alu 1 302 -11 22 0 0 0 chr20 22526960 22526982 -49626900 + AT_rich Low_complexity Low_complexity 1 22 0 612 250 81 17 chr20 22526982 22527154 -49626728 - MER5A DNA MER1_type 0 189 7 2545 44 3 0 chr20 22527162 22527459 -49626423 + AluSp SINE Alu 1 298 -15 2080 136 0 0 chr20 22528022 22528317 -49625565 + AluSx SINE Alu 4 298 -14 1308 189 62 38 chr20 22528349 22528480 -49625402 + AluJo SINE Alu 6 132 -180 2425 73 0 10 chr20 22528480 22528780 -49625102 + AluSg SINE Alu 1 297 -13 1308 189 62 38 chr20 22528780 22528939 -49624943 + AluJo SINE Alu 132 303 -9 2099 106 3 14 chr20 22530049 22530341 -49623541 + AluSg SINE Alu 1 289 -21 1772 114 24 4 chr20 22530601 22530847 -49623035 + AluSg SINE Alu 1 251 -59 25 31 0 0 chr20 22531925 22531957 -49621925 + AT_rich Low_complexity Low_complexity 1 32 0 1637 168 14 24 chr20 22532864 22533156 -49620726 + AluJo SINE Alu 1 289 -23 2259 116 0 0 chr20 22533161 22533471 -49620411 + AluSq SINE Alu 1 310 -3 2120 118 0 7 chr20 22533477 22533766 -49620116 + AluSx SINE Alu 1 287 -25 26 0 0 0 chr20 22533767 22533793 -49620089 + AT_rich Low_complexity Low_complexity 1 26 0 2110 100 0 48 chr20 22535222 22535367 -49618515 + AluSg SINE Alu 1 125 -185 2310 90 3 7 chr20 22535367 22535677 -49618205 + AluSc SINE Alu 1 309 0 2110 100 0 48 chr20 22535677 22535840 -49618042 + AluSg SINE Alu 125 294 -16 458 178 28 161 chr20 22536123 22536254 -49617628 - MER58B DNA MER1_type -2079 341 239 206 32 32 0 chr20 22536254 22536285 -49617597 + (CAAAA)n Simple_repeat Simple_repeat 3 34 0 458 178 28 161 chr20 22536285 22536333 -49617549 - MER58B DNA MER1_type -2181 239 186 977 187 43 66 chr20 22536550 22536807 -49617075 + AluJo SINE Alu 23 273 -39 255 318 81 52 chr20 22536951 22537124 -49616758 + MER5B DNA MER1_type 1 178 0 641 191 122 0 chr20 22537273 22537388 -49616494 + FLAM_A SINE Alu 1 129 -4 2370 110 0 0 chr20 22537761 22538070 -49615812 + AluSq SINE Alu 1 309 -4 261 0 0 0 chr20 22539089 22539118 -49614764 + (CA)n Simple_repeat Simple_repeat 2 30 0 27 49 0 0 chr20 22539508 22539549 -49614333 + AT_rich Low_complexity Low_complexity 1 41 0 2334 105 0 0 chr20 22539886 22540182 -49613700 + AluSx SINE Alu 1 296 -16 328 203 166 31 chr20 22540335 22540498 -49613384 + L1MC5 LINE L1 7659 7843 -118 2010 122 44 0 chr20 22541307 22541602 -49612280 + AluSx SINE Alu 1 308 -4 252 118 0 0 chr20 22542031 22542086 -49611796 - Alu SINE Alu 0 302 248 330 26 0 0 chr20 22543361 22543400 -49610482 + (GGA)n Simple_repeat Simple_repeat 1 39 0 299 259 0 37 chr20 22543896 22544004 -49609878 - L1M4 LINE L1 -2871 3275 3172 3284 144 19 0 chr20 22544103 22544624 -49609258 + L1PA16 LINE L1 5524 6054 -112 2023 150 3 0 chr20 22544624 22544931 -49608951 - AluSx SINE Alu -4 308 1 1119 97 26 7 chr20 22545740 22545894 -49607988 - AluSg SINE Alu -153 157 1 1034 98 0 46 chr20 22545896 22545948 -49607934 + MER51B-int LTR ERV1 6086 6139 -1677 2340 95 0 3 chr20 22545948 22546254 -49607628 + AluY SINE Alu 2 306 -5 1034 98 0 46 chr20 22546254 22546375 -49607507 + MER51B-int LTR ERV1 6139 6251 -1565 1578 135 0 4 chr20 22546376 22546605 -49607277 + MER51B-int LTR ERV1 7578 7805 -11 1609 109 157 4 chr20 22546617 22546884 -49606998 + MER51B LTR ERV1 1 308 -69 2481 62 3 0 chr20 22547132 22547424 -49606458 + AluY SINE Alu 1 293 -18 2313 92 0 10 chr20 22547654 22547958 -49605924 + AluSx SINE Alu 1 301 -11 1159 159 0 10 chr20 22548088 22548283 -49605599 + AluSg/x SINE Alu 118 310 0 1975 120 3 3 chr20 22548774 22549066 -49604816 - AluSx SINE Alu -20 292 1 1120 171 11 0 chr20 22549076 22549257 -49604625 - AluSg/x SINE Alu -22 288 106 1779 103 84 7 chr20 22549257 22549530 -49604352 - AluSx SINE Alu -14 298 5 2151 119 7 0 chr20 22550508 22550810 -49603072 + AluSx SINE Alu 1 304 -8 4751 48 5 13 chr20 22550944 22551552 -49602330 - SVA Other Other -760 626 24 22 0 0 0 chr20 22552197 22552219 -49601663 + AT_rich Low_complexity Low_complexity 1 22 0 290 232 217 14 chr20 22552256 22552394 -49601488 + L1MC4a LINE L1 5496 5661 -460 937 109 0 0 chr20 22552658 22552786 -49601096 - FLAM_C SINE Alu -5 128 1 241 185 19 19 chr20 22553272 22553326 -49600556 + GA-rich Low_complexity Low_complexity 5 58 0 213 149 0 21 chr20 22553518 22553565 -49600317 + (CAG)n Simple_repeat Simple_repeat 1 46 0 594 203 28 57 chr20 22554278 22554455 -49599427 + MER33 DNA MER1_type 13 184 -140 5185 106 38 45 chr20 22554472 22554661 -49599221 - L1PA12 LINE L1 0 6168 5979 2528 47 7 7 chr20 22554661 22554957 -49598925 - AluY SINE Alu -15 296 1 5185 106 38 45 chr20 22554957 22555007 -49598875 - L1PA12 LINE L1 -189 5979 5930 2259 110 10 0 chr20 22555007 22555307 -49598575 - AluSq SINE Alu -10 303 1 5185 106 38 45 chr20 22555307 22555908 -49597974 - L1PA12 LINE L1 -238 5930 5333 560 184 0 0 chr20 22555915 22556018 -49597864 + MER33 DNA MER1_type 222 324 0 265 245 28 19 chr20 22556276 22556382 -49597500 + MLT2F LTR ERVL 206 312 -351 275 302 35 9 chr20 22556406 22556522 -49597360 + LTR16A LTR ERVL 13 131 -319 363 261 27 9 chr20 22556820 22556931 -49596951 + MLT2E LTR ERVL 189 301 -327 1602 124 22 102 chr20 22556986 22557308 -49596574 + AluJo SINE Alu 1 296 -16 591 244 106 6 chr20 22558042 22558222 -49595660 - MLT2F LTR ERVL -465 198 1 309 250 67 67 chr20 22558667 22558831 -49595051 + L1MC4a LINE L1 5794 5957 -1851 2403 82 3 0 chr20 22559296 22559588 -49594294 - AluSp SINE Alu -15 298 6 1977 106 0 8 chr20 22560657 22560922 -49592960 - AluSg SINE Alu -19 291 29 703 265 140 28 chr20 22561509 22562152 -49591730 + HAL1 LINE L1 757 1495 -1012 545 143 0 0 chr20 22562176 22562253 -49591629 - THE1C LTR MaLR 0 375 299 21 0 0 0 chr20 22563789 22563810 -49590072 + AT_rich Low_complexity Low_complexity 1 21 0 2017 144 17 0 chr20 22566152 22566451 -49587431 + AluSx SINE Alu 5 308 -4 2127 132 0 0 chr20 22566472 22566767 -49587115 - AluY SINE Alu -16 295 1 347 274 44 9 chr20 22567206 22567319 -49586563 + L2 LINE L2 3196 3312 -1 288 0 0 0 chr20 22568020 22568052 -49585830 + (CAAAC)n Simple_repeat Simple_repeat 2 33 0 604 204 26 33 chr20 22569996 22570148 -49583734 + MIR SINE MIR 40 190 -72 1926 133 4 4 chr20 22570316 22570634 -49583248 + AluSx SINE Alu 3 320 0 531 277 193 25 chr20 22570686 22571007 -49582875 + LTR16A1 LTR ERVL 7 381 -76 589 244 26 44 chr20 22571867 22572095 -49581787 + L1MDa LINE L1 2411 2683 -3983 869 245 57 0 chr20 22572232 22572444 -49581438 - MER58A DNA MER1_type 0 224 1 223 323 23 54 chr20 22572653 22572783 -49581099 + MIR SINE MIR 20 146 -62 1871 203 158 26 chr20 22572787 22573295 -49580587 - MLT1G LTR MaLR -2 588 14 712 241 19 51 chr20 22573536 22573752 -49580130 - LTR16A1 LTR ERVL 0 457 249 2496 215 67 42 chr20 22574122 22574722 -49579160 - L1 LINE L1 -1166 4980 4360 1761 122 12 104 chr20 22574722 22575058 -49578824 - AluSx SINE Alu 0 312 8 2496 215 67 42 chr20 22575058 22575127 -49578755 - L1 LINE L1 -1786 4360 4294 343 251 107 15 chr20 22575248 22575426 -49578456 + MER58 DNA MER1_type 15 2418 -2 345 241 102 102 chr20 22575438 22575491 -49578391 - L1MC/D LINE L1 -2037 5771 5719 958 100 8 0 chr20 22575491 22575621 -49578261 - FLAM_C SINE Alu -2 131 1 345 241 102 102 chr20 22575621 22575812 -49578070 - L1MC/D LINE L1 -2088 5720 5527 547 248 101 38 chr20 22576287 22576629 -49577253 + LTR43 LTR ERV1 180 450 -62 228 243 208 21 chr20 22576906 22577050 -49576832 - L1P LINE L1 -1097 5049 4879 319 273 137 48 chr20 22577065 22577526 -49576356 - L1MC/D LINE L1 -1299 4847 4346 1169 161 0 0 chr20 22577558 22577750 -49576132 + L1PBa LINE L1 1 192 -6671 9950 152 28 32 chr20 22577753 22579195 -49574687 + L1PBa LINE L1 995 2441 -4421 2389 82 7 10 chr20 22579195 22579501 -49574381 - AluY SINE Alu -6 305 1 9950 152 28 32 chr20 22579501 22580337 -49573545 + L1PBa LINE L1 2441 3279 -3583 2282 111 7 0 chr20 22580337 22580635 -49573247 - AluSx SINE Alu -12 300 1 9950 152 28 32 chr20 22580635 22582136 -49571746 + L1PBa LINE L1 3279 4986 -1876 236 219 0 16 chr20 22582971 22583035 -49570847 + A-rich Low_complexity Low_complexity 2 64 0 2456 95 0 0 chr20 22583170 22583476 -49570406 - AluSx SINE Alu -6 306 1 2097 118 38 0 chr20 22583537 22583826 -49570056 - AluSx SINE Alu -12 300 1 266 235 0 0 chr20 22583889 22583957 -49569925 + A-rich Low_complexity Low_complexity 1 68 0 1398 153 21 8 chr20 22584091 22584326 -49569556 + AluSg/x SINE Alu 73 310 0 996 84 65 39 chr20 22585272 22585453 -49568429 + AluSg/x SINE Alu 125 309 0 345 312 40 29 chr20 22587540 22587713 -49566169 + MER5B DNA MER1_type 4 178 0 378 0 0 0 chr20 22587769 22587811 -49566071 + (TG)n Simple_repeat Simple_repeat 2 43 0 293 244 33 33 chr20 22587938 22588028 -49565854 - MIR SINE MIR -3 259 170 2229 102 0 34 chr20 22588663 22588986 -49564896 + AluSx SINE Alu 1 312 0 1350 178 6 88 chr20 22589000 22589320 -49564562 - AluJb SINE Alu -18 294 1 21 0 0 0 chr20 22589523 22589544 -49564338 + AT_rich Low_complexity Low_complexity 1 21 0 2204 105 3 10 chr20 22589738 22590042 -49563840 + AluSx SINE Alu 1 302 -10 1007 120 114 0 chr20 22591593 22591751 -49562131 - AluSp SINE Alu -4 309 134 2406 92 3 10 chr20 22591751 22592065 -49561817 - AluSp SINE Alu -1 312 1 231 342 74 40 chr20 22592766 22592915 -49560967 - MER5B DNA MER1_type -24 154 1 331 280 76 8 chr20 22592945 22593063 -49560819 + L2 LINE L2 3144 3269 -3 2019 121 0 0 chr20 22593656 22593929 -49559953 + AluSx SINE Alu 23 295 -17 1699 152 35 21 chr20 22594394 22594513 -49559369 + AluJb SINE Alu 3 119 -193 2406 86 3 6 chr20 22594513 22594827 -49559055 + AluSp SINE Alu 1 313 0 1699 152 35 21 chr20 22594827 22594996 -49558886 + AluJb SINE Alu 119 295 -17 478 255 39 33 chr20 22595022 22595175 -49558707 - L2 LINE L2 0 3313 3160 29 28 0 0 chr20 22595696 22595732 -49558150 + AT_rich Low_complexity Low_complexity 1 36 0 2297 90 0 3 chr20 22595733 22596021 -49557861 - AluSx SINE Alu -25 287 1 224 197 131 0 chr20 22596615 22596676 -49557206 - L2 LINE L2 -16 3256 3188 2523 82 0 0 chr20 22596739 22597045 -49556837 - AluSq SINE Alu -7 306 1 1043 121 52 11 chr20 22597331 22597505 -49556377 - L1MB3 LINE L1 -1 6182 6002 1791 148 79 3 chr20 22597826 22598116 -49555766 + AluSx SINE Alu 1 312 0 196 250 18 36 chr20 22598209 22598265 -49555617 + MIR3 SINE MIR 104 158 -50 1496 137 76 36 chr20 22599171 22599324 -49554558 - AluJo SINE Alu -15 297 152 198 0 0 0 chr20 22599324 22599346 -49554536 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 2224 101 0 0 chr20 22599346 22599632 -49554250 - AluSx SINE Alu -26 286 1 1496 137 76 36 chr20 22599632 22599754 -49554128 - AluJo SINE Alu -159 153 10 2428 84 3 0 chr20 22599857 22600155 -49553727 + AluSx SINE Alu 1 299 -13 669 210 0 8 chr20 22600297 22600421 -49553461 + FLAM_A SINE Alu 1 123 -10 2267 109 0 0 chr20 22600430 22600742 -49553140 + AluSx SINE Alu 1 312 0 871 230 176 15 chr20 22601853 22602188 -49551694 + MER113 DNA MER1_type? 46 434 -87 985 81 0 0 chr20 22602459 22602582 -49551300 - AluSx SINE Alu -23 289 167 1120 169 42 0 chr20 22602582 22602771 -49551111 - L1M4c LINE L1 -6168 216 20 641 231 59 0 chr20 22602812 22602981 -49550901 - MER104 DNA MER2_type -1 179 1 1108 135 6 0 chr20 22603163 22603319 -49550563 - AluSx SINE Alu -155 157 1 1184 193 24 0 chr20 22603496 22603703 -49550179 + L1M4c LINE L1 219 430 -5954 * 4883 165 22 3 chr20 22603695 22604545 -49549337 + L1MB3 LINE L1 5310 6175 -8 1552 186 181 8 chr20 22604668 22605066 -49548816 - MLT1C LTR MaLR 0 467 1 375 271 93 43 chr20 22605078 22605346 -49548536 - L1MC/D LINE L1 -481 5640 5459 1330 168 0 31 chr20 22605346 22605572 -49548310 - AluJb SINE Alu -7 305 87 2157 142 22 32 chr20 22605576 22605984 -49547898 - L1MB2 LINE L1 -1 6170 5767 2193 101 7 0 chr20 22606083 22606371 -49547511 - AluSq SINE Alu -23 290 1 452 243 27 0 chr20 22606915 22607026 -49546856 - MIR SINE MIR -32 230 117 506 249 25 103 chr20 22607712 22607993 -49545889 - L1MC5 LINE L1 -78 7883 7625 1782 133 56 7 chr20 22608040 22608326 -49545556 - AluSx SINE Alu -3 309 10 327 261 108 71 chr20 22608433 22608764 -49545118 - L1ME4a LINE L1 -94 6027 5710 729 178 0 0 chr20 22608764 22608882 -49545000 - FLAM_C SINE Alu -15 118 1 327 261 108 71 chr20 22608882 22609028 -49544854 - L1ME4a LINE L1 -411 5710 5534 2353 88 3 3 chr20 22609028 22609324 -49544558 + AluSx SINE Alu 1 296 -16 327 261 108 71 chr20 22609324 22609396 -49544486 - L1ME4a LINE L1 -587 5534 5466 482 146 36 45 chr20 22609396 22609506 -49544376 - AluJb SINE Alu -81 231 123 1411 145 8 13 chr20 22609703 22609938 -49543944 + MER46A DNA MER2_type 3 236 0 607 197 111 49 chr20 22611796 22612040 -49541842 - HAL1 LINE L1 -1043 1464 1206 927 188 69 69 chr20 22612044 22612262 -49541620 - MER58A DNA MER1_type -5 219 2 400 265 197 45 chr20 22612297 22612723 -49541159 - HAL1 LINE L1 -1854 653 163 1859 163 16 32 chr20 22612744 22613057 -49540825 - AluJo SINE Alu -4 308 1 590 196 27 0 chr20 22613460 22613572 -49540310 + MLT1C LTR MaLR 1 115 -352 * 1056 190 19 19 chr20 22613564 22613775 -49540107 + MLT1C LTR MaLR 256 466 -1 3364 101 140 16 chr20 22614179 22614742 -49539140 - LTR10E LTR ERV1 0 633 1 493 251 175 0 chr20 22614802 22614973 -49538909 - HAL1 LINE L1 -680 1827 1627 598 267 286 12 chr20 22615049 22615476 -49538406 - HAL1 LINE L1 -1807 700 157 414 256 60 41 chr20 22615651 22615917 -49537965 - L1M4 LINE L1 -3111 3035 2765 260 319 95 35 chr20 22616128 22616360 -49537522 - HAL1 LINE L1 -766 1741 1496 2117 136 0 0 chr20 22616381 22616675 -49537207 + AluSx SINE Alu 1 294 -18 2659 117 40 13 chr20 22616915 22617384 -49536498 - L1MCa LINE L1 -5010 1416 935 14528 124 27 12 chr20 22617388 22618677 -49535205 + Tigger1 DNA MER2_type 2 1270 -1148 2460 58 0 10 chr20 22618677 22618972 -49534910 - AluY SINE Alu -19 292 1 14528 124 27 12 chr20 22618972 22619665 -49534217 + Tigger1 DNA MER2_type 1270 2025 -393 2227 114 0 0 chr20 22619665 22619954 -49533928 + AluSx SINE Alu 1 289 -23 14528 124 27 12 chr20 22619954 22620239 -49533643 + Tigger1 DNA MER2_type 2025 2304 -114 2448 84 0 0 chr20 22620239 22620535 -49533347 - AluSg SINE Alu -14 296 1 937 141 16 76 chr20 22620537 22620721 -49533161 - AluJb SINE Alu -15 297 125 588 182 10 0 chr20 22620721 22620820 -49533062 + Tigger1 DNA MER2_type 2318 2417 -1 3932 175 109 4 chr20 22620821 22621650 -49532232 - L1MCa LINE L1 -5494 932 17 210 167 0 0 chr20 22621758 22621794 -49532088 + T-rich Low_complexity Low_complexity 1 36 0 3831 162 44 11 chr20 22621958 22622704 -49531178 - L1MB7 LINE L1 -9 6175 5405 2350 105 0 3 chr20 22622786 22623099 -49530783 - AluSq SINE Alu 0 313 2 1818 117 58 11 chr20 22623884 22624158 -49529724 + AluJb SINE Alu 13 299 -13 2274 111 3 0 chr20 22624158 22624455 -49529427 + AluSg SINE Alu 1 299 -11 675 277 119 37 chr20 22624455 22625091 -49528791 - L2 LINE L2 -39 3274 2575 613 230 118 45 chr20 22625198 22625616 -49528266 - MLT1H LTR MaLR 0 595 76 966 108 0 0 chr20 22626136 22626265 -49527617 + AluSg/x SINE Alu 174 302 -8 1316 130 72 2 chr20 22626265 22626492 -49527390 + THE1-int LTR MaLR 397 690 -961 2454 110 8 8 chr20 22626529 22626884 -49526998 - THE1A LTR MaLR 0 355 1 10831 96 50 8 chr20 22626884 22628001 -49525881 - THE1A-int LTR MaLR 0 1580 382 2335 116 0 0 chr20 22628001 22628304 -49525578 - AluSx SINE Alu -9 303 1 10831 96 50 8 chr20 22628304 22628702 -49525180 - THE1A-int LTR MaLR -1198 382 2 2155 124 14 33 chr20 22628703 22629065 -49524817 - THE1A LTR MaLR 0 355 1 29 0 0 0 chr20 22629305 22629334 -49524548 + AT_rich Low_complexity Low_complexity 1 29 0 2469 80 3 6 chr20 22629492 22629804 -49524078 - AluY SINE Alu 0 311 1 2151 139 0 0 chr20 22630247 22630557 -49523325 - AluSx SINE Alu -2 310 1 184 277 100 51 chr20 22632346 22632519 -49521363 - MIR3 SINE MIR -60 148 2 26 0 0 0 chr20 22633293 22633319 -49520563 + AT_rich Low_complexity Low_complexity 1 26 0 1562 186 51 0 chr20 22633362 22633636 -49520246 - AluJo SINE Alu -24 288 1 418 289 87 44 chr20 22637132 22637144 -49516738 - L1MC5 LINE L1 -37 7924 7914 1907 129 26 32 chr20 22637144 22637455 -49516427 - AluSx SINE Alu -3 309 1 418 289 87 44 chr20 22637455 22637809 -49516073 - L1MC5 LINE L1 -47 7914 7542 253 226 48 0 chr20 22638941 22639003 -49514879 + MIR SINE MIR 116 180 -82 203 345 0 0 chr20 22639012 22639096 -49514786 - MIR SINE MIR -169 93 10 187 300 29 0 chr20 22639142 22639212 -49514670 + L2 LINE L2 3175 3246 -26 930 208 9 61 chr20 22639900 22639970 -49513912 + MER63 DNA MER1_type 666 738 -323 2229 100 0 49 chr20 22639970 22640162 -49513720 - AluSq SINE Alu 0 313 142 2500 78 3 0 chr20 22640162 22640471 -49513411 - AluY SINE Alu -1 310 1 2229 100 0 49 chr20 22640471 22640607 -49513275 - AluSq SINE Alu -171 142 1 930 208 9 61 chr20 22640607 22640767 -49513115 + MER63 DNA MER1_type 738 884 -177 769 158 15 30 chr20 22640799 22640932 -49512950 - FLAM_C SINE Alu -12 131 1 271 156 133 44 chr20 22640944 22641034 -49512848 + MER63 DNA MER1_type 897 994 -68 3879 113 0 8 chr20 22641360 22641889 -49511993 - MER1A DNA MER1_type -1 526 2 10774 38 7 93 chr20 22642015 22643525 -49510357 + SVA Other Other 3 1383 -3 1936 112 28 7 chr20 22643621 22643906 -49509976 - AluSx SINE Alu -21 291 1 310 261 54 0 chr20 22644329 22644440 -49509442 - MIR SINE MIR -82 180 64 2043 117 10 36 chr20 22644516 22644683 -49509199 - AluSx SINE Alu -13 299 129 216 0 0 0 chr20 22644683 22644707 -49509175 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 2097 113 0 11 chr20 22644707 22644991 -49508891 - AluSg SINE Alu -29 281 1 2043 117 10 36 chr20 22644991 22645129 -49508753 - AluSx SINE Alu -181 131 1 2594 55 3 3 chr20 22645140 22645450 -49508432 - AluY SINE Alu 0 311 2 2191 115 7 0 chr20 22646004 22646300 -49507582 + AluSx SINE Alu 1 298 -14 468 250 61 0 chr20 22647005 22647153 -49506729 - MIR SINE MIR -60 202 46 2154 123 0 10 chr20 22647511 22647820 -49506062 + AluSx SINE Alu 1 306 -6 2002 187 81 49 chr20 22647923 22648453 -49505429 - L1MC4 LINE L1 -5 8037 7491 * 7487 194 37 54 chr20 22648451 22649080 -49504802 - L1 LINE L1 -3390 3818 3180 2104 128 3 10 chr20 22649080 22649385 -49504497 - AluSq SINE Alu -8 305 3 7487 194 37 54 chr20 22649385 22650568 -49503314 - L1 LINE L1 -4028 3180 2057 321 47 0 0 chr20 22650568 22650611 -49503271 + (TG)n Simple_repeat Simple_repeat 2 44 0 7487 194 37 54 chr20 22650611 22651284 -49502598 - L1 LINE L1 -5151 2057 1374 845 255 185 4 chr20 22651318 22651577 -49502305 - L1 LINE L1 -6424 785 480 2335 175 71 54 chr20 22651704 22651734 -49502148 + L1M4 LINE L1 4700 4728 -1418 2011 148 0 3 chr20 22651734 22652037 -49501845 - AluSx SINE Alu -10 302 1 2335 175 71 54 chr20 22652037 22652600 -49501282 + L1M4 LINE L1 4728 5303 -843 3677 213 60 10 chr20 22652603 22653471 -49500411 + L1M4 LINE L1 3525 4435 -1711 3539 209 102 13 chr20 22653467 22654613 -49499269 + L1MC/D LINE L1 4160 5464 -838 * 497 239 1 45 chr20 22655415 22655546 -49498336 - MER5B DNA MER1_type -50 139 4 385 240 39 0 chr20 22656074 22656178 -49497704 - MLT1L LTR MaLR -4 611 504 269 171 159 9 chr20 22656183 22656263 -49497619 + MIR SINE MIR 57 143 -67 1978 156 0 13 chr20 22656478 22656792 -49497090 + AluJb SINE Alu 1 310 -2 207 231 19 0 chr20 22657050 22657102 -49496780 + GA-rich Low_complexity Low_complexity 4 56 0 415 128 23 70 chr20 22657110 22657196 -49496686 + L1MC4 LINE L1 7961 8042 0 574 289 12 31 chr20 22658867 22658910 -49494972 - L1MC4a LINE L1 -1888 5920 5878 1940 158 10 0 chr20 22658910 22659207 -49494675 - AluSx SINE Alu -12 300 1 574 289 12 31 chr20 22659207 22659419 -49494463 - L1MC4a LINE L1 -1930 5878 5670 2261 105 0 0 chr20 22659800 22660095 -49493787 + AluSx SINE Alu 1 295 -17 209 297 30 20 chr20 22660261 22660362 -49493520 - MIR SINE MIR 0 262 161 1745 210 63 71 chr20 22660383 22660913 -49492969 - MLT1H LTR MaLR 0 590 33 2105 117 0 23 chr20 22660913 22661221 -49492661 + AluSx SINE Alu 1 301 -11 1745 210 63 71 chr20 22661221 22661242 -49492640 - MLT1H LTR MaLR -557 33 13 1097 189 0 0 chr20 22661250 22661435 -49492447 + MER58A DNA MER1_type 40 224 0 2530 62 3 0 chr20 22662029 22662337 -49491545 + AluY SINE Alu 1 309 -2 228 255 82 20 chr20 22662376 22662474 -49491408 + L1MC/D LINE L1 5832 5935 -1873 32 0 0 0 chr20 22662480 22662512 -49491370 + AT_rich Low_complexity Low_complexity 1 32 0 1294 180 77 31 chr20 22662515 22662941 -49490941 + MLT1D LTR MaLR 13 498 -7 191 27 0 108 chr20 22662941 22662961 -49490921 + (TA)n Simple_repeat Simple_repeat 1 17 -16 1333 187 154 23 chr20 22662961 22663357 -49490525 - LTR7 LTR ERV1 -2 448 1 191 27 0 108 chr20 22663357 22663373 -49490509 + (TA)n Simple_repeat Simple_repeat 17 33 0 2099 125 0 0 chr20 22663425 22663713 -49490169 - AluSg SINE Alu -9 301 14 341 223 223 0 chr20 22663892 22664013 -49489869 + MER5A DNA MER1_type 42 189 0 2254 98 10 0 chr20 22664813 22665108 -49488774 + AluSc SINE Alu 1 298 -11 2521 126 0 8 chr20 22665371 22665728 -49488154 + THE1B LTR MaLR 11 364 0 683 265 22 5 chr20 22666223 22666408 -49487474 - L1MB7 LINE L1 -10 6174 5987 210 233 0 0 chr20 22666757 22666817 -49487065 + (TG)n Simple_repeat Simple_repeat 1 60 0 1840 159 7 7 chr20 22667417 22667713 -49486169 + AluJo SINE Alu 1 296 -16 456 167 12 0 chr20 22667901 22667985 -49485897 + AluSg/x SINE Alu 207 291 -19 774 164 23 0 chr20 22667996 22668124 -49485758 + AluJ SINE Alu 2 132 -180 2040 106 29 0 chr20 22668847 22669122 -49484760 + AluSx SINE Alu 30 312 0 955 162 0 54 chr20 22669421 22669625 -49484257 + AluJ SINE Alu 120 312 0 989 200 71 11 chr20 22670116 22670400 -49483482 + L1MC4a LINE L1 6980 7270 -538 503 279 41 23 chr20 22670933 22671152 -49482730 + L1MEc LINE L1 2136 2358 -4038 374 212 0 0 chr20 22671271 22671337 -49482545 - MLT1H1 LTR MaLR -474 81 16 447 320 109 39 chr20 22671569 22672028 -49481854 - LTR16C LTR ERVL 0 491 1 325 313 67 13 chr20 22672199 22672349 -49481533 - MIR SINE MIR -70 192 35 1373 208 148 54 chr20 22672473 22672900 -49480982 - MLT1C LTR MaLR 0 467 1 189 241 130 0 chr20 22674010 22674064 -49479818 - L2 LINE L2 -2 3311 3251 1683 200 108 25 chr20 22674247 22674717 -49479165 + L1MC4a LINE L1 6790 7298 -510 4941 130 87 36 chr20 22674718 22675729 -49478153 + pTR5 LTR ERV1 743 2020 -418 329 231 29 19 chr20 22675729 22675833 -49478049 + LTR30 LTR ERV1 539 643 -79 2359 101 0 0 chr20 22675833 22676159 -49477723 + pTR5 LTR ERV1 67 392 -2046 1095 189 168 101 chr20 22676163 22676490 -49477392 + L1MD3 LINE L1 7475 7844 -151 2229 70 0 91 chr20 22676490 22676831 -49477051 - AluY SINE Alu -1 310 1 1095 189 168 101 chr20 22676831 22676968 -49476914 + L1MD3 LINE L1 7844 7970 -25 1477 139 46 17 chr20 22677000 22677237 -49476645 + AluSq SINE Alu 7 250 -63 318 60 40 0 chr20 22677345 22677395 -49476487 + AluSq SINE Alu 249 300 0 2391 67 0 51 chr20 22677462 22677776 -49476106 + AluY SINE Alu 1 298 -13 2130 100 48 0 chr20 22677787 22678077 -49475805 + AluSx SINE Alu 1 304 -8 1225 110 11 21 chr20 22678748 22678939 -49474943 - AluSg/x SINE Alu -3 307 119 2694 81 0 18 chr20 22678949 22679333 -49474549 - L1PB1 LINE L1 -1 6150 5774 2313 106 0 0 chr20 22679369 22679661 -49474221 + AluSg SINE Alu 1 292 -18 2188 140 0 0 chr20 22679677 22679977 -49473905 + AluSx SINE Alu 3 302 -10 621 282 39 11 chr20 22680064 22680245 -49473637 + MER91A DNA MER1_type 1 186 -10 4098 181 62 26 chr20 22680582 22681583 -49472299 - L1MB3 LINE L1 0 6183 5151 633 187 89 8 chr20 22681583 22681706 -49472176 + FLAM_C SINE Alu 1 133 0 22 0 0 0 chr20 22681723 22681745 -49472137 + AT_rich Low_complexity Low_complexity 1 22 0 419 138 46 18 chr20 22681774 22681883 -49471999 + CT-rich Low_complexity Low_complexity 1 112 0 591 202 0 34 chr20 22681889 22682008 -49471874 - AluSg/x SINE Alu 0 310 196 419 200 86 0 chr20 22682038 22682143 -49471739 - L1MB3 LINE L1 -1056 5090 4977 5447 127 20 16 chr20 22682143 22682963 -49470919 - Tigger1 DNA MER2_type 0 2418 1593 2046 119 26 7 chr20 22682963 22683266 -49470616 - AluSx SINE Alu -3 309 1 5447 127 20 16 chr20 22683266 22683301 -49470581 - Tigger1 DNA MER2_type -825 1593 1560 1680 152 8 13 chr20 22683298 22683653 -49470229 - Tigger1 DNA MER2_type -2009 409 1 * 858 246 22 0 chr20 22684619 22684798 -49469084 + MER3 DNA MER1_type 1 183 -26 780 191 7 0 chr20 22685233 22685369 -49468513 - MLT1H LTR MaLR -13 536 400 262 222 183 94 chr20 22685988 22686168 -49467714 - MARNA DNA Mariner -11 575 380 298 195 49 80 chr20 22686180 22686303 -49467579 - MLT1L LTR MaLR -5 610 460 258 170 64 0 chr20 22686324 22686371 -49467511 + MER81 DNA DNA 36 85 -29 691 290 72 60 chr20 22686377 22686990 -49466892 + MER49 LTR ERV1 21 842 -81 618 242 37 91 chr20 22687512 22688010 -49465872 - MLT2F LTR ERVL 0 663 5 869 192 32 41 chr20 22688637 22688867 -49465015 + L1ME2 LINE L1 5800 6038 -126 2348 76 0 41 chr20 22689174 22689490 -49464392 + AluY SINE Alu 1 303 -8 254 203 0 181 chr20 22689745 22689883 -49463999 - MLT1H LTR MaLR -16 533 421 22 35 0 0 chr20 22691230 22691259 -49462623 + AT_rich Low_complexity Low_complexity 1 29 0 450 0 0 0 chr20 22691296 22691346 -49462536 + (TC)n Simple_repeat Simple_repeat 1 50 0 888 200 43 143 chr20 22691389 22691849 -49462033 + L1ME3A LINE L1 5494 5907 -263 435 285 29 0 chr20 22691852 22691989 -49461893 + L1ME3A LINE L1 6027 6167 -3 757 194 0 0 chr20 22692732 22692866 -49461016 - L1PB4 LINE L1 -2 6154 6021 575 260 89 65 chr20 22692980 22693226 -49460656 + MLT1H LTR MaLR 76 327 -222 1670 161 14 21 chr20 22693318 22693609 -49460273 + L1MC/D LINE L1 5423 5711 -622 296 109 0 0 chr20 22693609 22693655 -49460227 + THE1B LTR MaLR 1 46 -382 232 167 0 37 chr20 22693657 22693711 -49460171 - L1PB4 LINE L1 -12 6144 6093 2050 134 6 34 chr20 22693717 22694045 -49459837 + THE1B LTR MaLR 46 364 0 11357 85 34 14 chr20 22694045 22695595 -49458287 + THE1B-int LTR MaLR 1 1580 0 2232 121 36 36 chr20 22695595 22695959 -49457923 + THE1B LTR MaLR 1 364 0 3198 153 49 21 chr20 22695959 22696569 -49457313 + L1MC1 LINE L1 5707 6333 0 360 223 0 64 chr20 22696569 22696636 -49457246 + MLT1H LTR MaLR 483 549 0 340 239 22 22 chr20 22698064 22698156 -49455726 + L1ME LINE L1 5468 5559 -605 241 116 70 0 chr20 22698156 22698199 -49455683 - MER63 DNA MER1_type -151 685 14 281 118 196 0 chr20 22698228 22698279 -49455603 - LTR67 LTR ERVL 0 557 497 227 330 0 21 chr20 22700394 22700491 -49453391 + LTR67 LTR ERVL 461 555 -2 1149 224 104 84 chr20 22700608 22701059 -49452823 + MLT1H LTR MaLR 51 510 -39 1733 97 120 0 chr20 22701231 22701490 -49452392 - MER51B LTR ERV1 0 377 88 1974 78 21 47 chr20 22701490 22702066 -49451816 - MER61-int LTR ERV1 -2582 2635 1923 877 217 13 94 chr20 22702088 22702387 -49451495 + L1MC4 LINE L1 7768 8042 0 185 294 159 18 chr20 22703131 22703294 -49450588 - MIR SINE MIR -56 206 21 202 216 0 0 chr20 22703952 22703989 -49449893 + (TGAA)n Simple_repeat Simple_repeat 1 37 0 186 289 0 0 chr20 22704254 22704299 -49449583 + MER5B DNA MER1_type 3 47 -131 * 423 236 11 0 chr20 22704295 22704384 -49449498 - MER5B DNA MER1_type -88 90 1 260 215 31 0 chr20 22704436 22704501 -49449381 - MER5A DNA MER1_type 0 189 123 299 146 21 0 chr20 22704503 22704551 -49449331 + L1MA3 LINE L1 12 60 -7505 4828 48 10 0 chr20 22704558 22705143 -49448739 - LTR10C LTR ERV1 0 591 1 1074 60 0 0 chr20 22705235 22705369 -49448513 - LTR10C LTR ERV1 -457 134 1 1055 60 0 0 chr20 22705461 22705595 -49448287 - LTR10C LTR ERV1 -457 134 1 22190 140 24 31 chr20 22705605 22707879 -49446003 + L1MA3 LINE L1 72 2362 -5362 289 160 0 0 chr20 22707879 22707929 -49445953 - Alu SINE Alu 0 302 253 1543 178 25 25 chr20 22707938 22708224 -49445658 - AluJb SINE Alu -26 286 1 22190 140 24 31 chr20 22708224 22712183 -49441699 + L1MA3 LINE L1 2370 7724 0 243 158 53 18 chr20 22712191 22712248 -49441634 - MER5A DNA MER1_type -49 140 82 562 268 85 46 chr20 22712387 22712496 -49441386 + MIR SINE MIR 3 106 -156 1116 234 165 18 chr20 22712496 22712897 -49440985 + LTR40b LTR ERVL 3 462 0 562 268 85 46 chr20 22712897 22713039 -49440843 + MIR SINE MIR 106 259 -3 2349 86 23 3 chr20 22713238 22713540 -49440342 + AluSp SINE Alu 1 308 -5 388 372 87 9 chr20 22713589 22713820 -49440062 + L3 LINE CR1 198 446 -1131 229 266 217 21 chr20 22713867 22714010 -49439872 + L3 LINE CR1 566 736 -841 318 255 72 78 chr20 22714215 22714368 -49439514 - MIR SINE MIR -71 191 40 225 239 57 34 chr20 22714459 22714547 -49439335 + L3 LINE CR1 1156 1245 -332 2555 46 16 0 chr20 22715201 22715507 -49438375 - AluY SINE Alu 0 311 1 331 246 318 0 chr20 22716619 22716883 -49436999 - L3 LINE CR1 -150 1427 1080 22 0 0 0 chr20 22718087 22718109 -49435773 + AT_rich Low_complexity Low_complexity 1 22 0 1602 239 64 8 chr20 22718867 22719382 -49434500 + L1M4 LINE L1 2869 3412 -2734 293 269 81 12 chr20 22720437 22720597 -49433285 + L1ME4a LINE L1 5841 6011 -110 43822 42 9 1 chr20 22720598 22726698 -49427184 + L1PA4 LINE L1 2 6155 0 2376 94 3 0 chr20 22728346 22728643 -49425239 - AluSq SINE Alu -15 298 1 837 182 28 0 chr20 22728748 22728891 -49424991 + MER3 DNA MER1_type 62 208 -1 262 260 48 10 chr20 22729164 22729268 -49424614 + L1M4c LINE L1 1284 1391 -4993 2806 163 72 49 chr20 22729277 22729988 -49423894 + L1MCa LINE L1 874 1600 -4826 207 0 0 0 chr20 22730094 22730117 -49423765 + (CAA)n Simple_repeat Simple_repeat 2 24 0 693 173 130 45 chr20 22730155 22730175 -49423707 + L1MCa LINE L1 2052 2069 -4357 1942 143 0 17 chr20 22730175 22730475 -49423407 + AluSx SINE Alu 1 295 -17 693 173 130 45 chr20 22730475 22730701 -49423181 + L1MCa LINE L1 2069 2250 -4176 237 33 0 0 chr20 22730874 22730904 -49422978 + (CA)n Simple_repeat Simple_repeat 2 31 0 246 62 0 0 chr20 22733769 22733801 -49420081 + (TG)n Simple_repeat Simple_repeat 1 32 0 2240 92 3 30 chr20 22733912 22734238 -49419644 - AluSc SINE Alu 0 309 1 1845 157 13 20 chr20 22735366 22735666 -49418216 - AluJb SINE Alu -14 298 1 287 251 88 47 chr20 22735801 22735972 -49417910 + L2 LINE L2 2175 2352 -962 455 287 70 47 chr20 22736084 22736485 -49417397 + L2 LINE L2 2566 2975 -339 1441 121 49 186 chr20 22737200 22737655 -49416227 + THE1B LTR MaLR 1 364 0 22 35 0 0 chr20 22737985 22738014 -49415868 + AT_rich Low_complexity Low_complexity 1 29 0 1886 139 73 3 chr20 22738378 22738665 -49415217 - AluJb SINE Alu 0 312 6 2233 129 0 35 chr20 22739369 22739717 -49414165 - MER1B DNA MER1_type -1 336 1 347 279 39 41 chr20 22739810 22740014 -49413868 + L1ME LINE L1 5605 5811 -351 1644 158 10 53 chr20 22740044 22740347 -49413535 + AluJo SINE Alu 1 290 -22 22 0 0 0 chr20 22740347 22740369 -49413513 + AT_rich Low_complexity Low_complexity 1 22 0 418 77 0 0 chr20 22740805 22740857 -49413025 + AluSg/x SINE Alu 212 263 -46 207 150 50 50 chr20 22740958 22741018 -49412864 - MER5C DNA MER1_type -234 90 31 464 146 67 0 chr20 22741325 22741414 -49412468 + L1MB2 LINE L1 6077 6171 0 233 29 0 29 chr20 22741742 22741777 -49412105 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 283 228 26 6 chr20 22742872 22742962 -49410920 - Charlie8 DNA MER1_type 0 2417 253 360 280 77 16 chr20 22743389 22743571 -49410311 + MLT1L LTR MaLR 203 395 -220 231 309 18 9 chr20 22743773 22743883 -49409999 - MIR3 SINE MIR -89 119 9 254 333 120 0 chr20 22743910 22744027 -49409855 - L2 LINE L2 -5 3308 3178 1309 108 0 31 chr20 22746029 22746224 -49407658 + MER30B DNA MER1_type 2 190 0 475 316 47 9 chr20 22748725 22748940 -49404942 + LTR16C LTR ERVL 73 295 -196 610 291 95 27 chr20 22750212 22750655 -49403227 + HAL1 LINE L1 2028 2500 -7 678 320 55 31 chr20 22751483 22751905 -49401977 + L1ME LINE L1 5357 5788 -333 1631 140 4 0 chr20 22752827 22753062 -49400820 + AluJb SINE Alu 49 284 -28 249 299 194 0 chr20 22753530 22753674 -49400208 + MER5A DNA MER1_type 18 189 0 909 258 186 11 chr20 22754171 22754543 -49399339 + L1MB8 LINE L1 5742 6178 0 2351 166 42 21 chr20 22756669 22757145 -49396737 + MER66B LTR ERV1 1 486 0 218 253 76 38 chr20 22757218 22757297 -49396585 + L3b LINE CR1 1408 1489 -94 733 283 172 16 chr20 22757913 22758291 -49395591 + MLT1L LTR MaLR 173 609 -6 968 198 32 0 chr20 22758823 22759010 -49394872 + MER20 DNA MER1_type 27 219 0 1497 281 76 36 chr20 22760371 22761150 -49392732 + L1M4 LINE L1 3495 4304 -1842 1824 149 4 14 chr20 22761216 22761497 -49392385 - AluJb SINE Alu -22 290 13 339 113 0 0 chr20 22762805 22762858 -49391024 + (CA)n Simple_repeat Simple_repeat 2 54 0 313 172 203 0 chr20 22762876 22762940 -49390942 + Tigger5 DNA MER2_type 2 78 -2245 457 184 0 0 chr20 22762943 22763019 -49390863 - Tigger5 DNA MER2_type -6 2317 2242 404 198 12 0 chr20 22763009 22763090 -49390792 + Tigger5 DNA MER2_type 2242 2323 0 * 306 211 26 0 chr20 22763402 22763478 -49390404 - MER116 DNA Mariner 0 80 3 5054 144 26 23 chr20 22764401 22765255 -49388627 + Tigger2 DNA MER2_type 1 856 -1862 906 193 12 12 chr20 22765248 22765414 -49388468 + Tigger2 DNA MER2_type 2553 2718 0 * 244 186 0 0 chr20 22766546 22766589 -49387293 + 5S rRNA rRNA 1 43 -78 270 254 16 0 chr20 22767840 22767903 -49385979 - MIR3 SINE MIR -48 160 97 1902 105 6 87 chr20 22769996 22770319 -49383563 - AluSx SINE Alu -15 297 1 1251 245 98 25 chr20 22770488 22770965 -49382917 + L1MEc LINE L1 37 548 -5848 580 263 78 0 chr20 22770975 22771154 -49382728 + L1MEc LINE L1 594 786 -5610 322 172 0 17 chr20 22771926 22771984 -49381898 - MER94 DNA DNA 0 134 78 311 289 61 0 chr20 22773312 22773426 -49380456 + MER5C DNA MER1_type 1 121 -203 2271 107 0 0 chr20 22773427 22773718 -49380164 + AluSx SINE Alu 1 291 -21 799 33 39 39 chr20 22773718 22773898 -49379984 + (TA)n Simple_repeat Simple_repeat 1 180 0 483 178 50 0 chr20 22773927 22774028 -49379854 - MER33 DNA MER1_type -170 154 49 228 149 0 0 chr20 22774289 22774336 -49379546 + (TG)n Simple_repeat Simple_repeat 2 48 0 557 221 204 12 chr20 22776932 22777104 -49376778 + MER3 DNA MER1_type 1 205 -4 1118 143 43 29 chr20 22777280 22777489 -49376393 - MER20 DNA MER1_type -4 215 4 2528 67 0 0 chr20 22777783 22778081 -49375801 + AluY SINE Alu 1 298 -13 850 255 97 86 chr20 22778129 22779206 -49374676 + HAL1 LINE L1 822 1909 -598 198 211 0 58 chr20 22780311 22780363 -49373519 - L2 LINE L2 -3 3310 3262 796 151 0 46 chr20 22781415 22781567 -49372315 + L1PB3 LINE L1 6008 6152 -2 1088 195 225 45 chr20 22781810 22782274 -49371608 + L1MC4a LINE L1 7317 7807 -3 204 97 0 0 chr20 22782293 22782324 -49371558 + (CA)n Simple_repeat Simple_repeat 2 32 0 382 249 213 27 chr20 22783093 22783314 -49370568 + MLT1L LTR MaLR 323 584 -31 1841 79 0 0 chr20 22784171 22784400 -49369482 + AluY SINE Alu 73 301 -10 1071 178 30 51 chr20 22784407 22784643 -49369239 + MER46A DNA MER2_type 4 234 -2 2216 95 3 3 chr20 22784836 22785132 -49368750 - AluY SINE Alu -15 296 1 2384 94 3 0 chr20 22785229 22785536 -49368346 + AluSp SINE Alu 1 308 -5 1689 157 7 31 chr20 22786105 22786392 -49367490 + AluJo SINE Alu 1 280 -32 1097 135 0 0 chr20 22786402 22786476 -49367406 + (GGGAA)n Simple_repeat Simple_repeat 1 252 0 1097 135 0 0 chr20 22786476 22786654 -49367228 + (GGGAA)n Simple_repeat Simple_repeat 1 178 0 672 199 48 14 chr20 22788091 22788237 -49365645 + MER3 DNA MER1_type 3 153 -56 2230 117 0 3 chr20 22788474 22788773 -49365109 - AluSx SINE Alu -14 298 1 2348 80 10 7 chr20 22788955 22789257 -49364625 + AluSx SINE Alu 1 303 -9 332 172 0 0 chr20 22790302 22790317 -49363565 + MER3 DNA MER1_type 33 47 -162 401 80 0 0 chr20 22790317 22790367 -49363515 - MER3 DNA MER1_type 0 209 160 5240 141 13 6 chr20 22790367 22791202 -49362680 - L1PA16 LINE L1 -3 6163 5323 3671 188 10 8 chr20 22791209 22791982 -49361900 + L1PA16 LINE L1 4558 5331 -831 1917 151 6 22 chr20 22791985 22792297 -49361585 - AluJo SINE Alu -5 307 1 668 188 69 31 chr20 22792297 22792457 -49361425 - MER3 DNA MER1_type -43 166 1 314 171 136 11 chr20 22792460 22792548 -49361334 + MER97b DNA MER1_type? 74 172 -881 488 262 144 39 chr20 22793603 22793958 -49359924 + L2 LINE L2 2922 3313 0 1529 164 59 0 chr20 22794343 22794599 -49359283 + AluJo SINE Alu 40 310 -2 372 263 147 77 chr20 22794820 22795249 -49358633 + L2 LINE L2 2855 3313 0 777 249 144 21 chr20 22795365 22795454 -49358428 + L1ME4a LINE L1 5270 5347 -774 341 43 21 0 chr20 22795454 22795501 -49358381 + (CA)n Simple_repeat Simple_repeat 1 48 0 777 249 144 21 chr20 22795501 22795989 -49357893 + L1ME4a LINE L1 5347 5921 -200 1221 201 88 27 chr20 22796959 22797253 -49356629 + AluJo SINE Alu 1 312 0 1110 262 50 58 chr20 22797306 22797561 -49356321 + L1MCa LINE L1 3 4294967224 -6117 1996 156 0 0 chr20 22797561 22797856 -49356026 + AluSx SINE Alu 1 295 -17 1110 262 50 58 chr20 22797856 22798222 -49355660 + L1MCa LINE L1 -73 294 -5751 3368 271 45 73 chr20 22798661 22799984 -49353898 + MER21-int LTR ERV1 2014 3299 -892 1646 239 241 14 chr20 22799984 22800620 -49353262 - L1MCa LINE L1 -4151 2275 1496 732 139 66 0 chr20 22801608 22801730 -49352152 + AluJ SINE Alu 3 132 -170 904 201 0 0 chr20 22801782 22801941 -49351941 + AluJ SINE Alu 120 278 -34 372 350 63 30 chr20 22805794 22806303 -49347579 + L1ME4a LINE L1 5443 5968 -153 330 266 0 0 chr20 22806303 22806431 -49347451 + (TA)n Simple_repeat Simple_repeat 1 128 0 1492 228 44 11 chr20 22806765 22807243 -49346639 + MLT1F LTR MaLR 1 540 -2 264 183 0 67 chr20 22809086 22809146 -49344736 - L2 LINE L2 0 3272 3217 1951 167 0 0 chr20 22809903 22810196 -49343686 - AluJb SINE Alu -19 293 1 2081 144 3 0 chr20 22811675 22811973 -49341909 - AluSx SINE Alu -13 299 1 292 90 42 0 chr20 22815498 22815552 -49338330 + L1MD3 LINE L1 7034 7107 -697 338 154 77 3 chr20 22815552 22815674 -49338208 + MER53 DNA DNA 1 171 -18 284 247 13 52 chr20 22815700 22815777 -49338105 + MLT1F1 LTR MaLR 46 119 -448 2225 147 148 60 chr20 22815781 22816327 -49337555 + L1MD3 LINE L1 7402 7995 0 1743 122 67 100 chr20 22817965 22818139 -49335743 - MER7A DNA MER2_type -2692 346 191 2063 137 52 25 chr20 22818139 22818504 -49335378 + THE1C LTR MaLR 1 375 0 1743 122 67 100 chr20 22818504 22818689 -49335193 - MER7A DNA MER2_type -2847 191 1 837 155 8 0 chr20 22818780 22818909 -49334973 - FLAM_C SINE Alu -2 131 2 312 303 76 20 chr20 22819453 22819706 -49334176 - L1M4 LINE L1 -340 5824 5567 635 149 0 0 chr20 22819727 22819821 -49334061 + AluS SINE Alu 1 94 -218 364 104 0 0 chr20 22819825 22819873 -49334009 + AluS SINE Alu 52 99 -203 319 305 54 71 chr20 22819883 22819986 -49333896 - L1M4 LINE L1 -2319 5489 5386 2088 137 0 7 chr20 22819986 22820278 -49333604 - AluJo SINE Alu -22 290 1 319 305 54 71 chr20 22820278 22820413 -49333469 - L1M4 LINE L1 -2422 5386 5255 1118 235 81 47 chr20 22820436 22820477 -49333405 + L1M4 LINE L1 4499 4537 -1609 2525 70 0 0 chr20 22820477 22820776 -49333106 + AluY SINE Alu 1 299 -12 1118 235 81 47 chr20 22820776 22821181 -49332701 + L1M4 LINE L1 4537 4960 -1186 807 186 23 12 chr20 22821183 22821355 -49332527 + L1MD2 LINE L1 6183 6356 -3 22 0 0 0 chr20 22821450 22821472 -49332410 + AT_rich Low_complexity Low_complexity 1 22 0 2045 152 0 3 chr20 22821627 22821929 -49331953 + AluJb SINE Alu 1 301 -11 1742 106 121 19 chr20 22821932 22822196 -49331686 - AluSx SINE Alu -21 291 1 2676 78 0 8 chr20 22822211 22822569 -49331313 - L1PA8 LINE L1 0 6172 5818 1018 49 0 0 chr20 22823699 22823821 -49330061 + AluY SINE Alu 177 298 -13 351 0 0 0 chr20 22823919 22823958 -49329924 + (CA)n Simple_repeat Simple_repeat 2 40 0 228 175 0 0 chr20 22823969 22824009 -49329873 + L2 LINE L2 2947 2986 -327 1238 181 98 4 chr20 22824107 22824373 -49329509 + MLT1F LTR MaLR 1 291 -251 659 150 25 17 chr20 22824366 22824486 -49329396 + MLT1F LTR MaLR 420 540 -2 * 514 238 88 13 chr20 22824995 22825230 -49328652 + L1MD3 LINE L1 7661 7987 -8 380 223 292 38 chr20 22825611 22825827 -49328055 + MLT1J2 LTR MaLR 124 435 -15 2367 102 3 3 chr20 22826077 22826390 -49327492 + AluSp SINE Alu 1 313 0 285 260 0 77 chr20 22826584 22826688 -49327194 + L1MC5 LINE L1 7833 7928 -33 2086 118 78 26 chr20 22827685 22828031 -49325851 - THE1B LTR MaLR 0 364 1 1672 196 28 0 chr20 22828742 22829028 -49324854 - AluJb SINE Alu -18 294 1 180 0 0 0 chr20 22829034 22829054 -49324828 + (TTAA)n Simple_repeat Simple_repeat 1 20 0 492 204 26 26 chr20 22830382 22830495 -49323387 + MER5B DNA MER1_type 5 117 -61 2030 132 4 0 chr20 22830697 22831007 -49322875 + AluSx SINE Alu 1 311 0 200 280 0 67 chr20 22831473 22831548 -49322334 - L2 LINE L2 -90 3223 3154 3876 223 50 38 chr20 22831772 22831892 -49321990 + MER45B DNA AcHobo 1 118 -1463 1707 172 0 49 chr20 22831892 22832217 -49321665 - AluJo SINE Alu -3 309 1 3876 223 50 38 chr20 22832217 22832547 -49321335 + MER45B DNA AcHobo 118 442 -1139 2256 58 4 0 chr20 22832547 22832821 -49321061 + AluY SINE Alu 37 311 0 3876 223 50 38 chr20 22832821 22833128 -49320754 + MER45B DNA AcHobo 442 778 -803 2247 57 0 0 chr20 22833128 22833390 -49320492 - AluY SINE Alu -6 305 44 3876 223 50 38 chr20 22833390 22833641 -49320241 + MER45B DNA AcHobo 778 1024 -16 534 232 0 0 chr20 22833776 22833888 -49319994 - MER5B DNA MER1_type -66 112 1 21 0 0 0 chr20 22834880 22834901 -49318981 + AT_rich Low_complexity Low_complexity 1 21 0 232 280 112 14 chr20 22835485 22835628 -49318254 - MIR3 SINE MIR -29 179 23 222 91 0 0 chr20 22836963 22836996 -49316886 + (ATTG)n Simple_repeat Simple_repeat 2 34 0 1608 186 3 18 chr20 22836999 22837284 -49316598 - AluJo SINE Alu -31 281 1 348 304 16 21 chr20 22837983 22838177 -49315705 + L1ME2 LINE L1 5661 5853 -311 210 71 0 0 chr20 22838270 22838298 -49315584 + (CA)n Simple_repeat Simple_repeat 2 29 0 1147 169 71 4 chr20 22838298 22838512 -49315370 + L1MC4 LINE L1 7480 7711 -331 2353 106 3 0 chr20 22838933 22839245 -49314637 + AluSp SINE Alu 1 313 0 846 163 0 27 chr20 22839579 22839726 -49314156 + FLAM_C SINE Alu 1 143 0 702 251 34 10 chr20 22839842 22840049 -49313833 + L1MC4 LINE L1 7692 7903 -139 4369 163 46 31 chr20 22840095 22840605 -49313277 + L1MB3 LINE L1 4964 5465 -718 243 61 0 0 chr20 22840605 22840638 -49313244 + (CA)n Simple_repeat Simple_repeat 2 34 0 4369 163 46 31 chr20 22840638 22841217 -49312665 + L1MB3 LINE L1 5465 6072 -111 2446 100 0 0 chr20 22841217 22841518 -49312364 + AluSx SINE Alu 1 301 -11 4369 163 46 31 chr20 22841518 22841632 -49312250 + L1MB3 LINE L1 6072 6183 0 22 35 0 0 chr20 22842949 22842978 -49310904 + AT_rich Low_complexity Low_complexity 1 29 0 479 254 235 15 chr20 22843411 22843890 -49309992 + L2 LINE L2 2732 3308 -5 588 164 0 0 chr20 22843910 22844020 -49309862 + (TGGA)n Simple_repeat Simple_repeat 1 110 0 271 281 30 103 chr20 22845084 22845287 -49308595 - MER5A DNA MER1_type 0 189 2 455 239 0 7 chr20 22849236 22849378 -49304504 + (CA)n Simple_repeat Simple_repeat 2 142 0 938 196 98 25 chr20 22850000 22850235 -49303647 - L1MA9 LINE L1 -50 6262 6011 183 296 37 0 chr20 22850380 22850461 -49303421 - L2 LINE L2 -1218 2096 2013 903 158 14 0 chr20 22850786 22850932 -49302950 + MER45A DNA AcHobo 31 178 0 2166 208 44 52 chr20 22851119 22851486 -49302396 + L1MD3 LINE L1 7429 7792 -203 2241 97 0 10 chr20 22851486 22851794 -49302088 + AluY SINE Alu 1 305 -6 2166 208 44 52 chr20 22851794 22851989 -49301893 + L1MD3 LINE L1 7792 7987 -8 2442 97 131 11 chr20 22852118 22852500 -49301382 + MSTA LTR MaLR 1 428 0 2213 114 3 10 chr20 22852545 22852851 -49301031 + AluJb SINE Alu 1 304 -8 2420 84 3 3 chr20 22852851 22853159 -49300723 + AluSp SINE Alu 1 308 -5 2522 102 8 30 chr20 22854086 22854458 -49299424 - THE1B LTR MaLR 0 364 1 297 0 0 0 chr20 22858240 22858273 -49295609 + (CA)n Simple_repeat Simple_repeat 2 34 0 507 324 19 0 chr20 22858377 22858584 -49295298 - L2 LINE L2 -617 2697 2487 2302 98 0 3 chr20 22858910 22859205 -49294677 + AluSc SINE Alu 2 295 -14 1977 48 4 4 chr20 22859830 22860070 -49293812 + L1PA8 LINE L1 5921 6163 -9 2579 54 0 0 chr20 22860070 22860365 -49293517 - AluY SINE Alu -16 295 1 2203 208 51 5 chr20 22860597 22861247 -49292635 + L1MC4a LINE L1 7091 7808 0 1575 184 29 29 chr20 22861253 22861563 -49292319 + AluJo SINE Alu 1 310 -2 23 33 0 0 chr20 22861585 22861615 -49292267 + AT_rich Low_complexity Low_complexity 1 30 0 449 295 6 30 chr20 22861677 22861843 -49292039 - L2 LINE L2 -862 2452 2291 284 296 48 40 chr20 22861881 22862131 -49291751 + L1MC4a LINE L1 4568 4819 -1327 42 20 0 0 chr20 22862155 22862204 -49291678 + AT_rich Low_complexity Low_complexity 1 49 0 2199 108 3 10 chr20 22862423 22862730 -49291152 + AluSx SINE Alu 1 305 -7 888 152 15 0 chr20 22863003 22863135 -49290747 + AluJ SINE Alu 1 134 -178 2277 109 0 0 chr20 22863135 22863429 -49290453 + AluSq SINE Alu 1 294 -19 369 0 0 0 chr20 22863434 22863475 -49290407 + (TG)n Simple_repeat Simple_repeat 2 42 0 327 217 75 47 chr20 22863499 22863605 -49290277 - L1MC4 LINE L1 -1339 6703 6595 1103 146 0 27 chr20 22863625 22863810 -49290072 + AluJ SINE Alu 133 312 0 638 285 146 77 chr20 22863832 22864468 -49289414 + L1MC4a LINE L1 5352 6031 -1777 818 189 7 0 chr20 22864584 22864737 -49289145 + L1M4 LINE L1 4697 4850 -1296 214 124 90 0 chr20 22864740 22864829 -49289053 + (TA)n Simple_repeat Simple_repeat 1 97 0 1806 143 0 63 chr20 22865334 22865635 -49288247 - AluJo SINE Alu -23 289 8 778 226 36 65 chr20 22866908 22867187 -49286695 + MLT1G LTR MaLR 19 289 -301 267 256 0 0 chr20 22867259 22867349 -49286533 + GA-rich Low_complexity Low_complexity 4 93 0 389 258 11 0 chr20 22867864 22867957 -49285925 + MER81 DNA DNA 1 94 -20 819 97 26 0 chr20 22868043 22868156 -49285726 + AluJb SINE Alu 1 116 -196 393 253 0 10 chr20 22868836 22868935 -49284947 + L2 LINE L2 3139 3236 -36 2286 119 0 0 chr20 22869189 22869501 -49284381 + AluSx SINE Alu 1 312 0 594 254 77 30 chr20 22869537 22869771 -49284111 + MIR SINE MIR 16 251 -11 2791 26 0 0 chr20 22869814 22870122 -49283760 + AluYa5 SINE Alu 1 308 -3 1193 109 0 0 chr20 22870124 22870280 -49283602 + AluSg/x SINE Alu 132 287 -25 22 0 0 0 chr20 22870287 22870309 -49283573 + AT_rich Low_complexity Low_complexity 1 22 0 1849 173 0 7 chr20 22871220 22871520 -49282362 - AluJo SINE Alu -14 298 1 711 180 23 8 chr20 22871758 22871886 -49281996 + FLAM_A SINE Alu 1 130 -3 1833 133 7 36 chr20 22872700 22873002 -49280880 + AluJb SINE Alu 5 297 -15 23 0 0 0 chr20 22873125 22873148 -49280734 + AT_rich Low_complexity Low_complexity 1 23 0 505 231 86 8 chr20 22873409 22873526 -49280356 + MER33 DNA MER1_type 1 126 -198 2673 190 40 139 chr20 22873547 22873698 -49280184 + L1MC1 LINE L1 2995 3159 -2987 484 53 0 0 chr20 22873698 22873755 -49280127 + U6 snRNA snRNA 1 57 -50 2673 190 40 139 chr20 22873755 22874134 -49279748 + L1MC1 LINE L1 3159 3574 -2572 2304 128 0 0 chr20 22874134 22874446 -49279436 + AluSx SINE Alu 1 312 0 2673 190 40 139 chr20 22874446 22874689 -49279193 + L1MC1 LINE L1 3574 3695 -2451 1898 119 19 0 chr20 22874689 22874950 -49278932 + AluSx SINE Alu 1 266 -46 2673 190 40 139 chr20 22874950 22875207 -49278675 + L1MC1 LINE L1 3695 3976 -2170 38815 28 23 1 chr20 22875208 22880624 -49273258 - L1PA2 LINE L1 -1 6154 616 2172 129 3 0 chr20 22880627 22880930 -49272952 - AluSx SINE Alu -8 304 1 4738 179 47 53 chr20 22880935 22882673 -49271209 + L1MC1 LINE L1 3981 5698 -635 2364 109 0 0 chr20 22882673 22882985 -49270897 + AluSx SINE Alu 1 312 0 4738 179 47 53 chr20 22882985 22883327 -49270555 + L1MC1 LINE L1 5698 6041 -292 2307 82 0 39 chr20 22883339 22883644 -49270238 + AluY SINE Alu 1 293 -18 3806 67 41 0 chr20 22883650 22884142 -49269740 + L1PA7 LINE L1 5635 6146 -8 325 265 10 0 chr20 22884161 22884259 -49269623 + L1MEc LINE L1 1567 1665 -4731 1740 135 29 44 chr20 22884459 22884799 -49269083 + L1MB8 LINE L1 5843 6177 -1 414 0 0 0 chr20 22884947 22884993 -49268889 + (CA)n Simple_repeat Simple_repeat 2 47 0 1484 127 35 96 chr20 22885094 22885408 -49268474 + L1MC1 LINE L1 6039 6333 0 835 142 39 63 chr20 22885412 22885617 -49268265 + MER33 DNA MER1_type 124 323 -1 405 274 17 0 chr20 22886250 22886367 -49267515 + MIR SINE MIR 63 181 -81 2056 140 0 10 chr20 22886578 22886885 -49266997 + AluSx SINE Alu 1 304 -8 181 300 0 17 chr20 22887702 22887762 -49266120 + MIR SINE MIR 81 139 -123 225 336 14 64 chr20 22887822 22887962 -49265920 + MIR3 SINE MIR 13 145 -63 194 295 0 16 chr20 22888680 22888741 -49265141 + MIR SINE MIR 81 140 -122 245 237 0 93 chr20 22889007 22889104 -49264778 - Charlie7 DNA MER1_type 0 2612 2525 461 250 40 57 chr20 22889118 22889166 -49264716 - Charlie7 DNA MER1_type -1923 689 642 2199 108 3 26 chr20 22889166 22889472 -49264410 + AluSq SINE Alu 1 299 -14 461 250 40 57 chr20 22889472 22889501 -49264381 - Charlie7 DNA MER1_type -1970 642 614 1694 186 35 25 chr20 22889501 22889818 -49264064 - 7SLRNA srpRNA srpRNA 0 320 1 461 250 40 57 chr20 22889818 22889987 -49263895 - Charlie7 DNA MER1_type -1998 614 446 260 247 82 10 chr20 22890091 22890188 -49263694 - Charlie7 DNA MER1_type -2412 200 97 294 268 158 8 chr20 22890634 22890880 -49263002 - L1ME4a LINE L1 -239 5882 5600 1920 145 7 7 chr20 22891375 22891672 -49262210 + AluSx SINE Alu 1 297 -15 903 169 7 19 chr20 22891811 22891965 -49261917 + FRAM SINE Alu 8 159 -17 21 0 0 0 chr20 22892007 22892028 -49261854 + AT_rich Low_complexity Low_complexity 1 21 0 181 28 111 0 chr20 22892736 22892772 -49261110 + T-rich Low_complexity Low_complexity 1 40 0 2251 105 0 0 chr20 22892775 22893079 -49260803 - AluSx SINE Alu -8 304 1 187 244 81 23 chr20 22894745 22894831 -49259051 + MIR SINE MIR 125 215 -47 1069 117 56 6 chr20 22895035 22895215 -49258667 + L1MC4 LINE L1 7356 7544 -498 2113 120 3 0 chr20 22895243 22895534 -49258348 - AluSp SINE Alu -10 303 12 1807 113 0 4 chr20 22895642 22895890 -49257992 + AluSx SINE Alu 60 306 -6 702 165 53 43 chr20 22895994 22896182 -49257700 - Charlie1 DNA MER1_type 0 2761 2572 488 195 0 0 chr20 22896180 22896267 -49257615 - Charlie1 DNA MER1_type -2571 190 104 * 2245 110 3 3 chr20 22896271 22896570 -49257312 + AluSq SINE Alu 1 299 -14 1402 280 74 62 chr20 22896608 22897340 -49256542 + MER21B LTR ERV1 6 746 -117 2250 107 7 0 chr20 22897378 22897678 -49256204 - AluSx SINE Alu -8 304 3 502 284 112 14 chr20 22897682 22897967 -49255915 + L2 LINE L2 2398 2710 -604 324 274 85 101 chr20 22897978 22898343 -49255539 + L2 LINE L2 2872 3230 -42 280 100 0 0 chr20 22898581 22898621 -49255261 - AluY SINE Alu -123 178 139 904 97 0 0 chr20 22898622 22898735 -49255147 + AluY SINE Alu 180 292 -19 2446 88 0 0 chr20 22898764 22899061 -49254821 - AluSg SINE Alu -13 297 1 3730 150 11 21 chr20 22899063 22899716 -49254166 + L1MB2 LINE L1 5526 6171 0 440 186 41 121 chr20 22899748 22899897 -49253985 - MLT1L LTR MaLR -119 466 289 311 257 140 15 chr20 22900263 22900399 -49253483 - MLT1L LTR MaLR -456 159 7 315 252 72 27 chr20 22900474 22900585 -49253297 - L1ME LINE L1 -459 5662 5547 1659 142 71 18 chr20 22900585 22900866 -49253016 + AluJo SINE Alu 1 296 -16 261 75 0 0 chr20 22900866 22900906 -49252976 + (TA)n Simple_repeat Simple_repeat 2 41 0 747 211 0 0 chr20 22901023 22901156 -49252726 + FLAM_C SINE Alu 1 133 0 2217 110 3 0 chr20 22901378 22901678 -49252204 - AluSx SINE Alu -11 301 1 418 215 234 19 chr20 22901739 22901897 -49251985 - MLT1J LTR MaLR -30 481 290 1514 205 0 7 chr20 22902090 22902388 -49251494 - AluJo SINE Alu -16 296 1 2310 87 10 10 chr20 22902657 22902968 -49250914 + AluSx SINE Alu 1 311 -1 417 242 103 36 chr20 22903370 22903564 -49250318 + MIR SINE MIR 10 216 -46 471 180 36 27 chr20 22904216 22904327 -49249555 + LTR37B LTR ERV1 8 119 -349 2060 115 21 0 chr20 22904370 22904656 -49249226 - AluSx SINE Alu -20 292 1 1348 170 5 0 chr20 22904660 22904872 -49249010 - AluJo SINE Alu -12 300 88 705 169 116 110 chr20 22904881 22905200 -49248682 + LTR37B LTR ERV1 148 468 0 1656 196 43 23 chr20 22905301 22905527 -49248355 - MER68 LTR ERV1 -2 560 323 1958 86 116 8 chr20 22905527 22905795 -49248087 - AluSg SINE Alu -13 297 1 1656 196 43 23 chr20 22905795 22905915 -49247967 - MER68 LTR ERV1 -239 323 207 685 289 43 17 chr20 22906271 22906506 -49247376 + LTR67 LTR ERVL 2 242 -315 371 340 32 0 chr20 22906620 22906776 -49247106 + LTR67 LTR ERVL 391 551 -6 869 158 0 0 chr20 22907108 22907241 -49246641 + FLAM_A SINE Alu 1 133 0 256 255 124 72 chr20 22907253 22907370 -49246512 + L2 LINE L2 3146 3274 -39 2314 162 74 0 chr20 22907370 22907789 -49246093 - LTR47A LTR ERVL -2 450 1 256 255 124 72 chr20 22907789 22907824 -49246058 + L2 LINE L2 3274 3306 -7 1855 200 113 42 chr20 22907824 22907958 -49245924 + MER34 LTR ERV1 1 124 -418 2451 97 0 0 chr20 22907958 22908266 -49245616 + AluSx SINE Alu 1 308 -4 1855 200 113 42 chr20 22908266 22908637 -49245245 + MER34 LTR ERV1 124 542 0 1259 209 129 58 chr20 22908661 22909129 -49244753 + HAL1 LINE L1 1134 1644 -863 2123 117 10 0 chr20 22909129 22909419 -49244463 + AluSx SINE Alu 1 293 -19 1259 209 129 58 chr20 22909419 22909471 -49244411 + HAL1 LINE L1 1644 1691 -816 570 250 255 32 chr20 22909478 22910101 -49243781 + HAL1 LINE L1 1746 2507 0 312 301 140 28 chr20 22910108 22910530 -49243352 - L2 LINE L2 -609 2705 2237 2303 86 14 0 chr20 22911492 22911784 -49242098 - AluSc SINE Alu -13 296 1 189 294 44 0 chr20 22911924 22911992 -49241890 + L2 LINE L2 3241 3311 -2 2451 79 0 0 chr20 22912306 22912610 -49241272 + AluY SINE Alu 1 304 -7 2043 120 3 13 chr20 22913100 22913400 -49240482 + AluSx SINE Alu 1 297 -15 1067 140 17 6 chr20 22913401 22913579 -49240303 + AluSg/x SINE Alu 130 309 -1 39 80 0 0 chr20 22913597 22913685 -49240197 + AT_rich Low_complexity Low_complexity 1 88 0 886 112 8 8 chr20 22913685 22913819 -49240063 - FLAM_C SINE Alu -9 134 1 947 164 47 26 chr20 22913912 22914144 -49239738 - L1MB8 LINE L1 -6 6172 5936 197 343 138 15 chr20 22915090 22915358 -49238524 + L2 LINE L2 1487 1787 -1527 417 218 8 32 chr20 22915585 22915709 -49238173 + L1ME1 LINE L1 4976 5096 -1050 695 158 0 0 chr20 22915723 22915837 -49238045 + FLAM_C SINE Alu 3 116 -27 2841 208 110 13 chr20 22915856 22916497 -49237385 + L1ME1 LINE L1 5122 5888 -278 2388 105 0 3 chr20 22916497 22916810 -49237072 + AluSx SINE Alu 1 312 0 2841 208 110 13 chr20 22916810 22917111 -49236771 + L1ME1 LINE L1 5888 6159 -7 2362 105 0 7 chr20 22918026 22918332 -49235550 - AluSx SINE Alu -8 304 1 474 266 37 79 chr20 22918487 22918542 -49235340 + L2 LINE L2 3108 3164 -149 2346 95 16 7 chr20 22918542 22918846 -49235036 - AluSx SINE Alu -5 307 1 474 266 37 79 chr20 22918846 22919004 -49234878 + L2 LINE L2 3164 3312 -1 1989 163 34 70 chr20 22919057 22919305 -49234577 - MSTB LTR MaLR 0 426 199 2295 74 18 0 chr20 22919305 22919590 -49234292 - AluSx SINE Alu -22 290 1 1989 163 34 70 chr20 22919590 22919783 -49234099 - MSTB LTR MaLR -227 199 1 1771 159 10 20 chr20 22920417 22920713 -49233169 - AluJo SINE Alu -19 293 1 450 297 88 33 chr20 22921945 22922218 -49231664 + L1ME4a LINE L1 5830 6117 -4 7132 197 75 55 chr20 22922250 22924129 -49229753 + L1MDa LINE L1 27 1866 -4674 2554 71 7 0 chr20 22924129 22924439 -49229443 + AluSp SINE Alu 1 312 -1 7132 197 75 55 chr20 22924439 22924740 -49229142 + L1MDa LINE L1 1866 2159 -4381 897 129 0 23 chr20 22924740 22924872 -49229010 + FLAM_C SINE Alu 1 129 -4 7132 197 75 55 chr20 22924872 22925169 -49228713 + L1MDa LINE L1 2159 2640 -3900 2196 108 3 3 chr20 22925169 22925464 -49228418 - AluSg SINE Alu -15 295 1 770 240 50 6 chr20 22925476 22925772 -49228110 + L1MDa LINE L1 3494 4733 -1807 965 156 0 0 chr20 22925772 22925911 -49227971 + MER2 DNA MER2_type 1 139 -206 3053 111 12 2 chr20 22925911 22926325 -49227557 + MER1A DNA MER1_type 1 418 -111 1063 144 27 5 chr20 22926326 22926514 -49227368 + L1MD1 LINE L1 6051 6242 0 2608 54 0 0 chr20 22927337 22927634 -49226248 - AluY SINE Alu -14 297 1 1172 159 15 10 chr20 22929145 22929346 -49224536 + MER2 DNA MER2_type 1 202 -143 2286 116 0 0 chr20 22929346 22929648 -49224234 - AluSx SINE Alu -10 302 1 27 29 0 0 chr20 22929655 22929689 -49224193 + AT_rich Low_complexity Low_complexity 1 34 0 378 234 0 0 chr20 22929695 22929759 -49224123 + MER2 DNA MER2_type 282 345 0 2124 144 0 0 chr20 22930456 22930748 -49223134 - AluSx SINE Alu -20 292 1 235 106 85 0 chr20 22930915 22930962 -49222920 + LTR49 LTR ERV1 471 521 -74 21 0 0 0 chr20 22930975 22930996 -49222886 + AT_rich Low_complexity Low_complexity 1 21 0 1310 152 5 19 chr20 22931341 22931552 -49222330 - AluJo SINE Alu -18 294 87 1790 163 14 7 chr20 22931723 22932012 -49221870 + AluSx SINE Alu 1 291 -21 348 169 37 7 chr20 22932043 22932179 -49221703 + (TA)n Simple_repeat Simple_repeat 1 140 0 1667 126 28 0 chr20 22932183 22932430 -49221452 - AluSx SINE Alu -7 305 52 2028 165 24 0 chr20 22932654 22932988 -49220894 - MER2 DNA MER2_type -2 342 1 1143 167 33 0 chr20 22933688 22933903 -49219979 + L1MB2 LINE L1 5948 6169 -2 2429 57 3 29 chr20 22933929 22934244 -49219638 + AluSp SINE Alu 1 307 -6 230 308 0 13 chr20 22934703 22934781 -49219101 + L3 LINE CR1 1392 1468 -109 767 264 49 8 chr20 22934785 22935031 -49218851 - MIR SINE MIR 0 262 7 234 0 0 0 chr20 22935250 22935276 -49218606 + (A)n Simple_repeat Simple_repeat 1 26 0 242 264 0 0 chr20 22936422 22936475 -49217407 - MER5A DNA MER1_type -98 91 39 230 322 103 11 chr20 22936732 22936993 -49216889 + L2 LINE L2 1898 2182 -1132 248 263 76 42 chr20 22937883 22938001 -49215881 + MER103 DNA DNA 2 123 -43 1258 237 251 16 chr20 22938009 22938519 -49215363 + LTR41 LTR ERVL 1 630 -143 1553 187 7 14 chr20 22939241 22939525 -49214357 + AluJb SINE Alu 1 282 -30 13759 108 32 44 chr20 22940274 22941317 -49212565 + Tigger1 DNA MER2_type 40 1094 -1324 1823 185 0 0 chr20 22941317 22941604 -49212278 - AluJb SINE Alu -23 289 3 13759 108 32 44 chr20 22941604 22942236 -49211646 + Tigger1 DNA MER2_type 1094 1732 -686 2278 101 3 0 chr20 22942236 22942534 -49211348 + AluSx SINE Alu 1 299 -13 748 102 74 0 chr20 22942543 22942651 -49211231 + AluJo/FLAM SINE Alu 1 116 -186 2503 69 0 16 chr20 22942651 22942956 -49210926 - AluY SINE Alu -11 300 1 2135 107 3 30 chr20 22942956 22943256 -49210626 - AluSg SINE Alu -18 292 1 13759 108 32 44 chr20 22943256 22943627 -49210255 + Tigger1 DNA MER2_type 1738 2112 -306 2503 62 0 13 chr20 22943627 22943934 -49209948 + AluY SINE Alu 1 303 -8 1664 173 19 26 chr20 22943944 22944251 -49209631 + AluSx SINE Alu 5 309 -3 13759 108 32 44 chr20 22944251 22944388 -49209494 + Tigger1 DNA MER2_type 2121 2222 -196 2343 123 42 78 chr20 22944388 22944411 -49209471 + Tigger2a DNA MER2_type 2 24 -2684 188 35 35 0 chr20 22944411 22944440 -49209442 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 5820 30 8 0 chr20 22944440 22945111 -49208771 - L1PA3 LINE L1 -10 6145 5470 2343 123 42 78 chr20 22945111 22945473 -49208409 + Tigger2a DNA MER2_type 23 372 -2336 2556 64 0 0 chr20 22945473 22945769 -49208113 - AluY SINE Alu -15 296 1 2343 123 42 78 chr20 22945769 22945830 -49208052 + Tigger2a DNA MER2_type 372 434 0 1084 149 26 10 chr20 22945830 22946024 -49207858 + Tigger1 DNA MER2_type 2220 2416 -2 248 206 37 84 chr20 22946030 22946137 -49207745 + L1MC4 LINE L1 7940 8041 -1 906 190 0 0 chr20 22946787 22946950 -49206932 - FRAM SINE Alu -2 164 2 382 288 63 35 chr20 22947416 22947701 -49206181 + L1MC4 LINE L1 7138 7430 -612 457 213 115 66 chr20 22947834 22948078 -49205804 + L1MC4 LINE L1 7689 7944 -98 527 261 35 0 chr20 22948556 22948698 -49205184 - MIR SINE MIR -23 239 93 324 234 89 32 chr20 22949128 22949252 -49204630 + MIR3 SINE MIR 9 139 -69 1689 149 4 29 chr20 22950137 22950412 -49203470 - AluJo SINE Alu -44 268 1 2158 104 17 0 chr20 22950508 22950805 -49203077 - AluSp SINE Alu -11 302 1 727 172 31 8 chr20 22951237 22951365 -49202517 + FLAM_C SINE Alu 1 131 -2 21 0 0 0 chr20 22951622 22951643 -49202239 + AT_rich Low_complexity Low_complexity 1 21 0 1931 108 61 0 chr20 22951645 22951969 -49201913 + AluSx SINE Alu 1 341 0 5422 48 3 8 chr20 22952250 22952882 -49201000 + SVA Other Other 758 1386 0 6384 76 44 0 chr20 22953243 22953793 -49200089 - L1PA13 LINE L1 -1 6162 5638 1828 111 92 0 chr20 22953793 22954064 -49199818 - AluSx SINE Alu -16 296 1 6384 76 44 0 chr20 22954064 22954809 -49199073 - L1PA13 LINE L1 -525 5638 4858 2962 188 58 3 chr20 22954930 22955530 -49198352 + LTR65 LTR ERV1 1 633 -36 436 136 0 49 chr20 22955775 22955856 -49198026 - AluSx SINE Alu -16 293 217 1084 109 0 0 chr20 22955856 22955994 -49197888 - AluSx SINE Alu -174 138 1 1107 195 4 33 chr20 22955994 22956235 -49197647 - L1MA7 LINE L1 -116 6175 5942 1130 129 0 6 chr20 22956236 22956399 -49197483 - AluSp SINE Alu -15 298 137 490 103 0 0 chr20 22956400 22956468 -49197414 - L1MA7 LINE L1 -342 5949 5882 4940 145 29 8 chr20 22956474 22956836 -49197046 - L1PB4 LINE L1 -2 6154 5801 189 0 0 0 chr20 22956836 22956857 -49197025 + (TG)n Simple_repeat Simple_repeat 2 22 0 4940 145 29 8 chr20 22956857 22957315 -49196567 - L1PB4 LINE L1 -355 5801 5317 1287 172 13 0 chr20 22957383 22957615 -49196267 + L1MC2 LINE L1 5842 6076 -268 3073 25 3 0 chr20 22957615 22957969 -49195913 - L1PA4 LINE L1 -6 6149 5795 584 15 0 0 chr20 22957971 22958039 -49195843 + L1PA4 LINE L1 5716 5783 -372 1201 233 52 0 chr20 22958043 22958369 -49195513 - L1PB4 LINE L1 -815 5331 4989 706 134 150 16 chr20 22958369 22958496 -49195386 - AluJb SINE Alu -13 299 156 1468 188 30 6 chr20 22958496 22958831 -49195051 - L1PB4 LINE L1 -1153 4993 4651 * 3805 202 18 17 chr20 22958825 22959550 -49194332 + L1M2 LINE L1 2734 3471 -3377 959 65 8 0 chr20 22959550 22959672 -49194210 + L1PA7 LINE L1 6026 6150 -4 3805 202 18 17 chr20 22959672 22959937 -49193945 + L1M2 LINE L1 3471 3734 -3114 917 102 8 0 chr20 22959939 22960057 -49193825 + FLAM_C SINE Alu 13 131 -12 438 216 1 9 chr20 22960057 22960198 -49193684 + L1M2 LINE L1 3745 3884 -2964 26 30 0 0 chr20 22960255 22960288 -49193594 + AT_rich Low_complexity Low_complexity 1 33 0 1710 159 70 51 chr20 22960773 22961233 -49192649 + MER31B LTR ERV1 1 658 -3 1990 246 51 2 chr20 22961765 22962272 -49191610 - MLT1F LTR MaLR -10 532 1 21 0 0 0 chr20 22962427 22962448 -49191434 + AT_rich Low_complexity Low_complexity 1 21 0 2630 221 59 2 chr20 22962764 22963376 -49190506 + MLT1E1 LTR MaLR 1 647 -7 3484 123 15 21 chr20 22963940 22964470 -49189412 + MER1A DNA MER1_type 1 527 0 189 0 0 0 chr20 22965433 22965454 -49188428 + (TAAAAA)n Simple_repeat Simple_repeat 6 26 0 1881 165 48 14 chr20 22966269 22966620 -49187262 - MLT1A1 LTR MaLR -2 363 1 201 353 87 30 chr20 22967203 22967571 -49186311 + L2 LINE L2 2450 2838 -476 233 251 10 42 chr20 22969710 22969827 -49184055 + CT-rich Low_complexity Low_complexity 1 113 0 2475 148 52 0 chr20 22970373 22970778 -49183104 - MSTB LTR MaLR 0 426 1 1465 143 62 0 chr20 22971116 22971389 -49182493 - L1MB3 LINE L1 -7 6176 5887 236 170 19 0 chr20 22971420 22971473 -49182409 + (TA)n Simple_repeat Simple_repeat 2 55 0 1029 123 0 6 chr20 22971587 22971749 -49182133 - L1PA13 LINE L1 -1 6162 6002 1321 151 13 4 chr20 22971749 22971988 -49181894 - L1MB3 LINE L1 -295 5888 5648 1182 198 202 10 chr20 22971988 22972479 -49181403 - L1M4 LINE L1 -3519 3438 2847 2365 226 50 12 chr20 22972515 22973255 -49180627 - L1M4 LINE L1 -4660 2299 1539 2485 73 3 0 chr20 22973984 22974285 -49179597 - AluSp SINE Alu -11 302 1 333 0 0 0 chr20 22974331 22974368 -49179514 + (CA)n Simple_repeat Simple_repeat 2 38 0 360 355 65 1 chr20 22974766 22974938 -49178944 + MIR SINE MIR 37 217 -45 206 350 12 0 chr20 22975085 22975165 -49178717 - MIR3 SINE MIR -6 202 122 2315 107 0 0 chr20 22975368 22975667 -49178215 + AluSx SINE Alu 1 299 -13 2365 90 0 3 chr20 22977050 22977351 -49176531 + AluSq SINE Alu 1 300 -13 2005 111 24 14 chr20 22977708 22978043 -49175839 + AluSx SINE Alu 1 312 0 915 177 51 37 chr20 22978357 22978572 -49175310 - MER20 DNA MER1_type -1 218 1 628 120 40 0 chr20 22980960 22981060 -49172822 - U13 snRNA snRNA 0 104 1 2148 157 45 30 chr20 22981484 22981690 -49172192 - L1MC2 LINE L1 -25 6319 6118 1675 163 49 3 chr20 22981690 22981978 -49171904 - AluJb SINE Alu -9 303 3 2148 157 45 30 chr20 22981978 22982237 -49171645 - L1MC2 LINE L1 -226 6118 5847 405 302 86 48 chr20 22982405 22982779 -49171103 - L1M4 LINE L1 -2090 4056 3669 316 308 141 13 chr20 22983241 22983475 -49170407 - L1M4 LINE L1 -3023 3123 2860 606 152 15 182 chr20 22983480 22983744 -49170138 + L1PB4 LINE L1 5113 5332 -814 2656 157 44 35 chr20 22983749 22983778 -49170104 + L1PB4 LINE L1 5579 5606 -550 2163 113 0 13 chr20 22983778 22984089 -49169793 + AluSx SINE Alu 1 307 -5 2656 157 44 35 chr20 22984089 22984331 -49169551 + L1PB4 LINE L1 5606 5844 -312 2420 67 0 6 chr20 22984331 22984644 -49169238 - AluY SINE Alu 0 311 1 2656 157 44 35 chr20 22984644 22984943 -49168939 + L1PB4 LINE L1 5844 6155 -1 1886 148 39 0 chr20 22985168 22985451 -49168431 + AluSx SINE Alu 2 295 -17 708 159 0 0 chr20 22985451 22985564 -49168318 - AluJo/FLAM SINE Alu -188 114 2 1094 151 44 85 chr20 22985778 22986050 -49167832 - L1MB5 LINE L1 0 6174 5914 2638 246 63 8 chr20 22986055 22986637 -49167245 - L1M4 LINE L1 -2259 4385 3732 2133 105 10 20 chr20 22986637 22986943 -49166939 + AluSx SINE Alu 1 303 -9 2638 246 63 8 chr20 22986943 22987274 -49166608 - L1M4 LINE L1 -2912 3732 3421 21 0 0 0 chr20 22987278 22987299 -49166583 + AT_rich Low_complexity Low_complexity 1 21 0 2053 148 0 13 chr20 22987314 22987619 -49166263 + AluSx SINE Alu 1 301 -11 2254 235 17 34 chr20 22987936 22988853 -49165029 - L1M4 LINE L1 -3213 3431 2533 * 42164 39 0 4 chr20 22988843 22995045 -49158837 - L1PA4 LINE L1 0 6155 1 1180 136 12 6 chr20 22995093 22995262 -49158620 + AluSg/x SINE Alu 126 295 -17 1036 193 53 10 chr20 22995280 22995595 -49158287 - L1M4 LINE L1 -4149 2497 2077 681 162 140 29 chr20 22995595 22995731 -49158151 - AluJo SINE Alu -161 151 1 5035 217 45 44 chr20 22995752 22995956 -49157926 - L1M4 LINE L1 -4788 1858 1656 537 79 13 0 chr20 22995956 22996032 -49157850 - MADE1 DNA Mariner -2 78 2 5035 217 45 44 chr20 22996032 22996224 -49157658 - L1M4 LINE L1 -4990 1656 1466 1033 186 48 8 chr20 22996224 22996476 -49157406 - L1MA9 LINE L1 -7 6305 6044 5035 217 45 44 chr20 22996476 22997922 -49155960 - L1M4 LINE L1 -5180 1466 2 2307 78 19 16 chr20 22997990 22998299 -49155583 + AluSq SINE Alu 1 310 -3 2491 116 126 0 chr20 22998423 22998836 -49155046 - MER4C LTR ERV1 0 465 1 648 80 0 11 chr20 22998861 22998949 -49154933 - HY4 scRNA scRNA -3 90 4 15422 143 43 46 chr20 22998961 23001818 -49152064 - MER4C-int LTR ERV1 -5 6593 3728 2102 130 0 3 chr20 23001818 23002119 -49151763 - AluSx SINE Alu -12 300 1 15422 143 43 46 chr20 23002119 23002616 -49151266 - MER4C-int LTR ERV1 -2870 3728 3231 5149 70 9 0 chr20 23002616 23003270 -49150612 - PABL_A LTR ERV1 0 660 1 15422 143 43 46 chr20 23003270 23003499 -49150383 - MER4C-int LTR ERV1 -3367 3231 1906 1567 151 122 102 chr20 23003502 23004457 -49149425 - MER4-int LTR ERV1 -3623 2323 412 378 91 195 13 chr20 23004462 23004539 -49149343 - MER4C LTR ERV1 -374 91 1 4646 114 53 24 chr20 23004677 23005434 -49148448 + MER4E LTR ERV1 1 779 0 354 179 0 0 chr20 23007030 23007097 -49146785 - L1M4 LINE L1 -1383 4763 4697 700 238 115 41 chr20 23007195 23007611 -49146271 - L1MC4a LINE L1 -1945 5863 5417 860 244 136 14 chr20 23007895 23008351 -49145531 - MLT1F1 LTR MaLR 0 590 66 317 267 95 9 chr20 23008418 23008534 -49145348 - MLT1F1-int LTR MaLR -26 1345 1220 2040 110 54 48 chr20 23009410 23009764 -49144118 - Tigger3(Golem) DNA MER2_type 0 3029 2674 2988 120 59 17 chr20 23009769 23010309 -49143573 - Tigger3(Golem) DNA MER2_type -239 2790 2228 562 196 47 0 chr20 23010295 23010402 -49143480 - Tigger3(Golem) DNA MER2_type -2917 112 1 * 239 289 33 22 chr20 23013426 23013516 -49140366 - L2 LINE L2 -7 3306 3216 25 0 0 0 chr20 23014824 23014849 -49139033 + AT_rich Low_complexity Low_complexity 1 25 0 2022 138 27 0 chr20 23014951 23015248 -49138634 + AluSx SINE Alu 1 305 -7 1700 144 94 35 chr20 23015646 23015927 -49137955 + MER46B DNA MER2_type 2 183 -2548 201 39 0 0 chr20 23015927 23015953 -49137929 + (CCAA)n Simple_repeat Simple_repeat 2 27 0 1700 144 94 35 chr20 23015953 23016010 -49137872 + MER46B DNA MER2_type 183 235 -1 1576 174 7 32 chr20 23016616 23016926 -49136956 - AluJo SINE Alu -10 302 1 2732 103 73 5 chr20 23017066 23017492 -49136390 - L1MA8 LINE L1 -4 6287 5833 232 342 102 37 chr20 23018010 23018197 -49135685 + L2 LINE L2 302 500 -2814 2068 196 29 10 chr20 23018682 23019065 -49134817 + MLT1B LTR MaLR 1 390 0 731 253 71 21 chr20 23020038 23020389 -49133493 + L1ME LINE L1 991 1391 -4981 878 267 123 35 chr20 23020399 23020945 -49132937 + L1ME LINE L1 1384 2164 -4399 543 144 72 0 chr20 23021009 23021106 -49132776 - MER58 DNA MER1_type 0 2420 2317 239 284 0 15 chr20 23022695 23022762 -49131120 + MIR SINE MIR 16 81 -127 10604 206 85 15 chr20 23023162 23024611 -49129271 - L1MB3 LINE L1 -121 6298 4952 2295 98 7 3 chr20 23024611 23024908 -49128974 + AluSq SINE Alu 1 298 -15 10604 206 85 15 chr20 23024908 23025535 -49128347 - L1MB3 LINE L1 -1467 4952 4370 2233 102 0 10 chr20 23025535 23025839 -49128043 - AluSq SINE Alu -12 301 1 10604 206 85 15 chr20 23025839 23028969 -49124913 - L1MB3 LINE L1 -2049 4370 623 233 0 62 0 chr20 23028969 23029001 -49124881 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 10604 206 85 15 chr20 23029001 23029623 -49124259 - L1MB3 LINE L1 -5796 623 46 338 304 137 38 chr20 23030729 23031042 -49122840 + HAL1b LINE L1 53 396 -952 3454 133 88 13 chr20 23031060 23031675 -49122207 + L1MB3 LINE L1 5523 6183 0 1179 165 5 32 chr20 23032078 23032296 -49121586 + AluJb SINE Alu 85 296 -16 239 250 62 9 chr20 23032296 23032408 -49121474 + L1ME LINE L1 3286 3403 -2979 1121 89 0 182 chr20 23032507 23032743 -49121139 + 7SK RNA RNA 1 193 0 625 312 40 12 chr20 23032889 23033290 -49120592 + L1ME LINE L1 3781 4192 -2190 3787 209 70 25 chr20 23033323 23034396 -49119486 - L1MC4a LINE L1 0 7808 6891 670 252 135 83 chr20 23034399 23034844 -49119038 + MLT1H1 LTR MaLR 87 554 -1 1377 250 91 132 chr20 23035134 23036083 -49117799 - L2 LINE L2 -5 3308 2283 991 152 6 6 chr20 23036083 23036248 -49117634 + AluSg/x SINE Alu 136 300 -10 1377 250 91 132 chr20 23036248 23036796 -49117086 - L2 LINE L2 -1030 2283 1714 233 139 0 0 chr20 23036869 23036912 -49116970 - AluSx SINE Alu -6 296 254 1544 87 10 0 chr20 23036916 23037111 -49116771 - AluSx SINE Alu -115 197 1 437 241 30 23 chr20 23037444 23037577 -49116305 + L1MC5 LINE L1 7667 7800 -161 777 287 49 0 chr20 23038204 23038427 -49115455 - MIR SINE MIR -10 252 19 354 220 60 0 chr20 23038485 23038585 -49115297 + L1MC5 LINE L1 7808 7913 -48 320 169 281 0 chr20 23041216 23041305 -49112577 - MER5B DNA MER1_type -6 172 59 436 231 22 0 chr20 23041504 23041595 -49112287 - MER5A DNA MER1_type -83 106 14 183 42 0 0 chr20 23042281 23042305 -49111577 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 859 246 118 47 chr20 23042358 23043103 -49110779 - L1ME LINE L1 -4906 1478 806 563 345 55 12 chr20 23043512 23043842 -49110040 - L1ME LINE L1 -6014 549 206 2206 98 0 14 chr20 23046053 23046376 -49107506 - AluSq SINE Alu 0 319 1 183 114 0 0 chr20 23046446 23046481 -49107401 + (TTTTTA)n Simple_repeat Simple_repeat 6 40 0 321 227 96 106 chr20 23046591 23046789 -49107093 - L1MC4 LINE L1 -274 7768 7573 246 241 76 13 chr20 23046858 23046937 -49106945 - L1MC4a LINE L1 -540 7268 7185 * 316 307 20 0 chr20 23046934 23047035 -49106847 - L1MC4 LINE L1 -818 7224 7122 21 0 0 0 chr20 23047326 23047347 -49106535 + AT_rich Low_complexity Low_complexity 1 21 0 1720 149 63 16 chr20 23047358 23047674 -49106208 - MER44D DNA MER2_type -6 603 3 404 340 121 0 chr20 23048287 23048502 -49105380 - MIR SINE MIR -8 254 14 181 302 79 0 chr20 23048557 23048620 -49105262 - L2 LINE L2 -94 3178 3111 2501 76 0 0 chr20 23048835 23049138 -49104744 + AluSg SINE Alu 1 303 -7 833 209 130 30 chr20 23049341 23049571 -49104311 - L1ME2 LINE L1 0 6164 5912 203 304 25 25 chr20 23050028 23050107 -49103775 - MIR SINE MIR -1 261 183 2493 75 0 3 chr20 23050279 23050586 -49103296 + AluSc SINE Alu 1 306 -3 472 298 48 0 chr20 23050794 23050962 -49102920 + MIR3 SINE MIR 30 205 -3 279 262 140 9 chr20 23051412 23051519 -49102363 - L2 LINE L2 -1 3312 3192 198 0 0 0 chr20 23051742 23051764 -49102118 + (TTTC)n Simple_repeat Simple_repeat 2 23 0 2141 102 0 7 chr20 23051767 23052052 -49101830 - AluSx SINE Alu -29 283 1 402 259 238 5 chr20 23052176 23052369 -49101513 + MIR SINE MIR 15 252 -10 279 242 177 48 chr20 23052500 23052624 -49101258 - L2 LINE L2 -15 3298 3159 1971 93 30 158 chr20 23053051 23053450 -49100432 + MER7A DNA MER2_type 1 346 0 519 194 0 10 chr20 23053509 23053607 -49100275 - MER91B DNA MER1_type -12 178 82 21 36 0 0 chr20 23053699 23053727 -49100155 + AT_rich Low_complexity Low_complexity 1 28 0 257 317 115 50 chr20 23054131 23054749 -49099133 + L2 LINE L2 2247 2904 -410 764 187 13 39 chr20 23054844 23055024 -49098858 - FRAM SINE Alu 0 166 3 219 250 31 16 chr20 23055030 23055094 -49098788 + L2 LINE L2 2986 3050 -222 2374 93 0 19 chr20 23055714 23056027 -49097855 + AluSx SINE Alu 1 307 -5 224 188 31 0 chr20 23056308 23056372 -49097510 + (TA)n Simple_repeat Simple_repeat 2 67 0 180 341 79 8 chr20 23056799 23056925 -49096957 - MIR3 SINE MIR -29 179 45 182 170 57 57 chr20 23057814 23057867 -49096015 + MIR SINE MIR 139 191 -71 222 37 0 0 chr20 23058381 23058408 -49095474 + (TTCTCC)n Simple_repeat Simple_repeat 5 31 0 1941 84 45 52 chr20 23058410 23058697 -49095185 - AluSq SINE Alu -28 285 1 249 194 90 15 chr20 23059134 23059201 -49094681 - MIR SINE MIR -74 188 117 3672 203 47 13 chr20 23059248 23060040 -49093842 - MER21B LTR ERV1 -2 861 43 325 214 0 29 chr20 23060043 23060113 -49093769 - MER21B LTR ERV1 -777 86 19 306 0 0 0 chr20 23060176 23060210 -49093672 + (TC)n Simple_repeat Simple_repeat 1 34 0 1337 218 128 20 chr20 23060585 23060985 -49092897 - L1MA5 LINE L1 0 6300 5858 21 36 0 0 chr20 23061097 23061125 -49092757 + AT_rich Low_complexity Low_complexity 1 28 0 1469 103 0 0 chr20 23061250 23061444 -49092438 + AluSg SINE Alu 1 194 -116 2416 113 14 0 chr20 23061519 23061874 -49092008 + Tigger4(Zombi) DNA MER2_type 2372 2731 0 1365 78 6 6 chr20 23062078 23062258 -49091624 + U2 snRNA snRNA 1 180 -8 2232 120 0 0 chr20 23062613 23062912 -49090970 - AluSx SINE Alu -13 299 1 4687 168 50 16 chr20 23062913 23063818 -49090064 + L1MB5 LINE L1 5232 6165 -9 1864 224 10 24 chr20 23063851 23064267 -49089615 - MLT1F1 LTR MaLR -157 410 1 2808 207 39 67 chr20 23064269 23064354 -49089528 - L1M4 LINE L1 -2365 3781 3695 1740 160 0 66 chr20 23064354 23064672 -49089210 - AluSx SINE Alu -15 297 1 2808 207 39 67 chr20 23064672 23065262 -49088620 - L1M4 LINE L1 -2451 3695 3141 1899 100 0 0 chr20 23065262 23065503 -49088379 - AluSc SINE Alu -68 241 1 2808 207 39 67 chr20 23065503 23065845 -49088037 - L1M4 LINE L1 -3005 3141 2791 1784 48 26 0 chr20 23065912 23066140 -49087742 - L1PA14 LINE L1 0 6161 5928 311 223 255 0 chr20 23066140 23066234 -49087648 - MER5A DNA MER1_type -7 182 65 662 65 0 0 chr20 23066234 23066327 -49087555 - AluSp/q SINE Alu 0 313 221 2506 67 0 10 chr20 23066495 23066795 -49087087 + AluSp SINE Alu 1 297 -16 2209 110 3 0 chr20 23066891 23067191 -49086691 + AluSg SINE Alu 1 301 -9 1310 210 125 20 chr20 23067250 23067659 -49086223 + MER119 DNA MER1_type 131 582 -1 2346 83 0 20 chr20 23068102 23068402 -49085480 - AluSg SINE Alu -16 294 1 1848 123 95 42 chr20 23068746 23069105 -49084777 - L1MA6 LINE L1 0 6300 5923 2107 139 3 0 chr20 23069106 23069415 -49084467 + 7SLRNA srpRNA srpRNA 1 310 -10 45 55 0 0 chr20 23069415 23069488 -49084394 + AT_rich Low_complexity Low_complexity 1 73 0 225 205 0 0 chr20 23069497 23069536 -49084346 - L1MA6 LINE L1 -364 5936 5898 405 254 48 40 chr20 23069663 23069789 -49084093 + MER5A DNA MER1_type 63 189 0 221 296 51 20 chr20 23070189 23070287 -49083595 - MER91A DNA MER1_type -94 102 2 245 327 29 62 chr20 23070424 23070579 -49083303 + L2 LINE L2 2555 2703 -611 1241 32 6 13 chr20 23070579 23070757 -49083125 + L1PA5 LINE L1 6000 6154 0 245 327 29 62 chr20 23070757 23070809 -49083073 + L2 LINE L2 2703 2755 -559 2328 184 96 8 chr20 23070964 23071441 -49082441 - LTR53 LTR ERVL 0 519 1 2265 111 14 0 chr20 23071614 23071911 -49081971 - AluSx SINE Alu -10 302 2 2273 166 14 70 chr20 23071946 23072428 -49081454 - MER65C LTR ERV1 -6 455 1 1787 167 3 27 chr20 23072714 23073014 -49080868 + AluJo SINE Alu 1 293 -19 229 303 0 15 chr20 23073384 23073450 -49080432 - MIR SINE MIR -174 88 24 4640 153 26 16 chr20 23073597 23074393 -49079489 - L1MB3 LINE L1 0 6183 5380 589 244 52 36 chr20 23074401 23074594 -49079288 + Charlie8 DNA MER1_type 81 276 -2141 180 357 0 0 chr20 23075825 23075909 -49077973 - MIR SINE MIR -18 244 161 414 224 51 105 chr20 23076705 23076902 -49076980 - L1MC5 LINE L1 -86 7875 7669 2268 105 3 0 chr20 23076902 23077197 -49076685 - AluSc SINE Alu -13 296 1 414 224 51 105 chr20 23077197 23077244 -49076638 - L1MC5 LINE L1 -292 7669 7649 837 156 0 15 chr20 23077244 23077379 -49076503 - FLAM_C SINE Alu 0 133 1 414 224 51 105 chr20 23077379 23077446 -49076436 - L1MC5 LINE L1 -312 7649 7580 1187 132 0 0 chr20 23077527 23077701 -49076181 - L1PA14 LINE L1 -11 6150 5977 756 261 14 18 chr20 23078023 23078241 -49075641 + L1ME LINE L1 5546 5762 -400 * 5624 119 23 45 chr20 23078240 23078874 -49075008 + L1MC1 LINE L1 5398 6007 -326 13388 42 2 0 chr20 23078874 23081248 -49072634 - L1PA5 LINE L1 -6 6148 3771 5624 119 23 45 chr20 23081248 23081531 -49072351 + L1MC1 LINE L1 6007 6295 -38 1818 165 0 7 chr20 23081531 23081822 -49072060 + AluJo SINE Alu 15 303 -9 37 0 0 0 chr20 23082134 23082171 -49071711 + AT_rich Low_complexity Low_complexity 1 37 0 524 176 32 32 chr20 23082174 23082299 -49071583 - MIR SINE MIR -73 189 65 303 322 0 0 chr20 23082973 23083063 -49070819 - L1MC4 LINE L1 -1339 6703 6614 3793 174 115 3 chr20 23083065 23084285 -49069597 - L1P5 LINE L1 -361 5790 4379 180 0 0 0 chr20 23084285 23084305 -49069577 + (TTTTA)n Simple_repeat Simple_repeat 3 22 0 3793 174 115 3 chr20 23084305 23084430 -49069452 - L1P5 LINE L1 -1772 4379 4269 238 222 63 0 chr20 23084434 23084497 -49069385 - L1MDa LINE L1 -4529 2428 2362 1247 205 16 0 chr20 23084501 23084759 -49069123 - L1MDa LINE L1 -4752 2207 1946 23 0 0 0 chr20 23084759 23084782 -49069100 + AT_rich Low_complexity Low_complexity 1 23 0 587 94 0 0 chr20 23084790 23084875 -49069007 - L1MA3 LINE L1 -5 6300 6216 8504 154 46 14 chr20 23084875 23085606 -49068276 - L1M1 LINE L1 -4252 3313 2607 195 69 0 0 chr20 23085606 23085635 -49068247 + (TTTG)n Simple_repeat Simple_repeat 1 29 0 2090 126 0 3 chr20 23085635 23085916 -49067966 - AluSx SINE Alu -32 280 1 8504 154 46 14 chr20 23085916 23088330 -49065552 - L1M1 LINE L1 -4957 2608 16 1306 216 30 14 chr20 23088330 23088701 -49065181 - L1MDa LINE L1 -4997 1962 1586 1579 170 18 29 chr20 23088729 23089005 -49064877 - AluJo SINE Alu -6 306 34 927 196 0 12 chr20 23089012 23089185 -49064697 - FRAM SINE Alu -6 170 1 5327 214 88 31 chr20 23089185 23089715 -49064167 - L1MDa LINE L1 -5300 1559 1061 1188 144 44 48 chr20 23089715 23089859 -49064023 + MER30 DNA MER1_type 1 145 -85 2123 119 23 0 chr20 23089859 23090161 -49063721 + AluSg SINE Alu 1 309 -1 1188 144 44 48 chr20 23090161 23090245 -49063637 + MER30 DNA MER1_type 145 228 -2 5327 214 88 31 chr20 23090245 23091117 -49062765 - L1MDa LINE L1 -5798 1061 77 4442 133 29 4 chr20 23091122 23091811 -49062071 - MER50 LTR ERV1 -28 706 1 236 274 0 0 chr20 23091812 23091863 -49062019 - L1MDa LINE L1 -6798 61 11 833 255 67 118 chr20 23091968 23092553 -49061329 + MLT1H1 LTR MaLR 1 555 0 2283 108 0 0 chr20 23092713 23093008 -49060874 + AluSq SINE Alu 1 295 -18 549 199 78 14 chr20 23093072 23093213 -49060669 + L2 LINE L2 3161 3310 -3 874 315 58 6 chr20 23093459 23093805 -49060077 + LTR16C LTR ERVL 126 489 -2 507 270 28 22 chr20 23093822 23094000 -49059882 - MIR SINE MIR -82 180 2 635 275 46 23 chr20 23094093 23094311 -49059571 - Charlie8 DNA MER1_type -2135 282 60 395 147 73 0 chr20 23094311 23094379 -49059503 + L1ME2 LINE L1 6004 6076 -88 1815 189 0 3 chr20 23094420 23094721 -49059161 + AluJb SINE Alu 1 300 -12 2073 101 25 0 chr20 23094805 23095083 -49058799 - AluSx SINE Alu -11 301 17 450 297 88 33 chr20 23095397 23095670 -49058212 + L1ME4a LINE L1 5830 6117 -4 7132 197 75 55 chr20 23095702 23097581 -49056301 + L1MDa LINE L1 27 1866 -4674 2554 71 7 0 chr20 23097581 23097891 -49055991 + AluSp SINE Alu 1 312 -1 7132 197 75 55 chr20 23097891 23098192 -49055690 + L1MDa LINE L1 1866 2159 -4381 897 129 0 23 chr20 23098192 23098324 -49055558 + FLAM_C SINE Alu 1 129 -4 7132 197 75 55 chr20 23098324 23098621 -49055261 + L1MDa LINE L1 2159 2640 -3900 2196 108 3 3 chr20 23098621 23098916 -49054966 - AluSg SINE Alu -15 295 1 770 240 50 6 chr20 23098928 23099224 -49054658 + L1MDa LINE L1 3494 4733 -1807 965 156 0 0 chr20 23099224 23099363 -49054519 + MER2 DNA MER2_type 1 139 -206 3053 111 12 2 chr20 23099363 23099777 -49054105 + MER1A DNA MER1_type 1 418 -111 1063 144 27 5 chr20 23099778 23099966 -49053916 + L1MD1 LINE L1 6051 6242 0 2608 54 0 0 chr20 23100789 23101086 -49052796 - AluY SINE Alu -14 297 1 1172 159 15 10 chr20 23102597 23102798 -49051084 + MER2 DNA MER2_type 1 202 -143 2286 116 0 0 chr20 23102798 23103100 -49050782 - AluSx SINE Alu -10 302 1 27 29 0 0 chr20 23103107 23103141 -49050741 + AT_rich Low_complexity Low_complexity 1 34 0 378 234 0 0 chr20 23103147 23103211 -49050671 + MER2 DNA MER2_type 282 345 0 2124 144 0 0 chr20 23103908 23104200 -49049682 - AluSx SINE Alu -20 292 1 235 106 85 0 chr20 23104367 23104414 -49049468 + LTR49 LTR ERV1 471 521 -74 21 0 0 0 chr20 23104427 23104448 -49049434 + AT_rich Low_complexity Low_complexity 1 21 0 1310 152 5 19 chr20 23104793 23105004 -49048878 - AluJo SINE Alu -18 294 87 1790 163 14 7 chr20 23105175 23105464 -49048418 + AluSx SINE Alu 1 291 -21 348 169 37 7 chr20 23105495 23105631 -49048251 + (TA)n Simple_repeat Simple_repeat 1 140 0 1667 126 28 0 chr20 23105635 23105882 -49048000 - AluSx SINE Alu -7 305 52 2028 165 24 0 chr20 23106106 23106440 -49047442 - MER2 DNA MER2_type -2 342 1 1143 167 33 0 chr20 23107140 23107355 -49046527 + L1MB2 LINE L1 5948 6169 -2 2429 57 3 29 chr20 23107381 23107696 -49046186 + AluSp SINE Alu 1 307 -6 230 308 0 13 chr20 23108155 23108233 -49045649 + L3 LINE CR1 1392 1468 -109 767 264 49 8 chr20 23108237 23108483 -49045399 - MIR SINE MIR 0 262 7 234 0 0 0 chr20 23108702 23108728 -49045154 + (A)n Simple_repeat Simple_repeat 1 26 0 242 264 0 0 chr20 23109874 23109927 -49043955 - MER5A DNA MER1_type -98 91 39 230 322 103 11 chr20 23110184 23110445 -49043437 + L2 LINE L2 1898 2182 -1132 248 263 76 42 chr20 23111335 23111453 -49042429 + MER103 DNA DNA 2 123 -43 1258 237 251 16 chr20 23111461 23111971 -49041911 + LTR41 LTR ERVL 1 630 -143 1553 187 7 14 chr20 23112693 23112977 -49040905 + AluJb SINE Alu 1 282 -30 11035 108 38 18 chr20 23113726 23114769 -49039113 + Tigger1 DNA MER2_type 40 1130 -1288 1823 185 0 0 chr20 23114769 23115056 -49038826 - AluJb SINE Alu -23 289 3 11035 108 38 18 chr20 23115056 23115687 -49038195 + Tigger1 DNA MER2_type 1130 1747 -671 2278 101 3 0 chr20 23115688 23115986 -49037896 + AluSx SINE Alu 1 299 -13 741 103 75 0 chr20 23115996 23116103 -49037779 + AluJo/FLAM SINE Alu 2 116 -196 2503 69 0 16 chr20 23116103 23116408 -49037474 - AluY SINE Alu -11 300 1 2135 107 3 30 chr20 23116408 23116708 -49037174 - AluSg SINE Alu -18 292 1 3127 120 16 32 chr20 23116732 23117079 -49036803 + Tigger1 DNA MER2_type 1735 2086 -332 2503 62 0 13 chr20 23117079 23117386 -49036496 + AluY SINE Alu 1 303 -8 1664 173 19 26 chr20 23117396 23117703 -49036179 + AluSx SINE Alu 5 309 -3 3127 120 16 32 chr20 23117703 23117840 -49036042 + Tigger1 DNA MER2_type 2095 2222 -196 2343 123 42 78 chr20 23117840 23117863 -49036019 + Tigger2a DNA MER2_type 2 24 -2684 188 35 35 0 chr20 23117863 23117892 -49035990 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 5820 30 8 0 chr20 23117892 23118563 -49035319 - L1PA3 LINE L1 -10 6145 5470 2343 123 42 78 chr20 23118563 23118925 -49034957 + Tigger2a DNA MER2_type 23 372 -2336 2556 64 0 0 chr20 23118925 23119221 -49034661 - AluY SINE Alu -15 296 1 2343 123 42 78 chr20 23119221 23119282 -49034600 + Tigger2a DNA MER2_type 372 434 0 1084 149 26 10 chr20 23119282 23119476 -49034406 + Tigger1 DNA MER2_type 2220 2416 -2 248 206 37 84 chr20 23119482 23119589 -49034293 + L1MC4 LINE L1 7940 8041 -1 906 190 0 0 chr20 23120239 23120402 -49033480 - FRAM SINE Alu -2 164 2 382 288 63 35 chr20 23120868 23121153 -49032729 + L1MC4 LINE L1 7138 7430 -612 457 213 115 66 chr20 23121286 23121530 -49032352 + L1MC4 LINE L1 7689 7944 -98 527 261 35 0 chr20 23122008 23122150 -49031732 - MIR SINE MIR -23 239 93 324 234 89 32 chr20 23122580 23122704 -49031178 + MIR3 SINE MIR 9 139 -69 1689 149 4 29 chr20 23123589 23123864 -49030018 - AluJo SINE Alu -44 268 1 2158 104 17 0 chr20 23123960 23124257 -49029625 - AluSp SINE Alu -11 302 1 727 172 31 8 chr20 23124689 23124817 -49029065 + FLAM_C SINE Alu 1 131 -2 21 0 0 0 chr20 23125074 23125095 -49028787 + AT_rich Low_complexity Low_complexity 1 21 0 1931 108 61 0 chr20 23125097 23125421 -49028461 + AluSx SINE Alu 1 341 0 656 236 239 18 chr20 23125869 23126195 -49027687 + MLT1J LTR MaLR 107 504 -7 1267 284 68 24 chr20 23126206 23126752 -49027130 - L3 LINE CR1 -77 1500 931 278 140 123 0 chr20 23127039 23127096 -49026786 + MER5A DNA MER1_type 26 89 -100 246 208 293 19 chr20 23127107 23127178 -49026704 - MER5A DNA MER1_type -3 186 87 659 266 23 18 chr20 23127178 23127372 -49026510 + MER5B DNA MER1_type 2 178 0 469 275 150 18 chr20 23127377 23127544 -49026338 - MER5A DNA MER1_type 0 189 1 188 307 68 74 chr20 23127705 23127881 -49026001 - L3 LINE CR1 -1125 452 278 1855 125 56 14 chr20 23128237 23128387 -49025495 - AluSx SINE Alu -13 299 157 2162 122 6 3 chr20 23128387 23128698 -49025184 - AluSx SINE Alu 0 312 1 1855 125 56 14 chr20 23128698 23128834 -49025048 - AluSx SINE Alu -155 157 1 271 194 58 19 chr20 23130467 23130570 -49023312 - Charlie7 DNA MER1_type -2466 146 40 567 153 113 87 chr20 23130775 23130925 -49022957 + FRAM SINE Alu 1 154 -12 384 279 158 42 chr20 23131410 23131629 -49022253 - L2 LINE L2 -16 3297 3105 1697 160 3 40 chr20 23131629 23131929 -49021953 + AluJo SINE Alu 14 302 -10 2316 111 3 0 chr20 23131932 23132238 -49021644 + AluSg SINE Alu 1 307 -3 384 279 158 42 chr20 23132238 23132545 -49021337 - L2 LINE L2 -209 3104 2709 2395 77 0 32 chr20 23132545 23132856 -49021026 - AluY SINE Alu -10 301 1 384 279 158 42 chr20 23132856 23132873 -49021009 - L2 LINE L2 -604 2709 2695 661 106 17 14 chr20 23132873 23132980 -49020902 + LTR7 LTR ERV1 252 443 -7 13747 144 20 36 chr20 23132987 23135709 -49018173 + HERVH LTR ERV1 1 2992 -4721 7076 120 7 10 chr20 23135695 23137645 -49016237 + HERVH LTR ERV1 3140 5286 -1805 * 2679 127 9 12 chr20 23137648 23138080 -49015802 + HERVH LTR ERV1 7283 7713 0 1421 150 129 78 chr20 23138080 23138506 -49015376 + LTR7 LTR ERV1 1 448 -2 287 157 48 36 chr20 23138510 23138593 -49015289 + L1M3 LINE L1 2785 2868 -3278 740 247 44 54 chr20 23138610 23138779 -49015103 + L1M3 LINE L1 4517 4683 -1463 2559 70 0 6 chr20 23138779 23139092 -49014790 + AluY SINE Alu 1 311 0 740 247 44 54 chr20 23139092 23139238 -49014644 + L1M3 LINE L1 4683 4829 -1317 340 278 1 1 chr20 23139248 23139365 -49014517 + L1M3 LINE L1 5664 5780 -398 907 265 86 3 chr20 23139379 23139681 -49014201 - L2 LINE L2 -613 2701 2375 1665 158 0 8 chr20 23140061 23140321 -49013561 + AluJb SINE Alu 43 300 -12 689 152 0 0 chr20 23140501 23140600 -49013282 - AluJ/FLAM SINE Alu -212 100 2 439 279 0 7 chr20 23140740 23140876 -49013006 - L1ME4a LINE L1 -17 6104 5970 305 297 20 0 chr20 23140877 23140978 -49012904 - L1ME4a LINE L1 -194 5927 5825 1143 199 7 48 chr20 23141550 23141822 -49012060 - MIR SINE MIR 0 262 2 561 206 15 15 chr20 23142126 23142262 -49011620 - L1MB8 LINE L1 0 6178 6043 2252 95 14 14 chr20 23142274 23142433 -49011449 - AluSc SINE Alu -15 294 133 2357 92 0 0 chr20 23142433 23142728 -49011154 - AluSc SINE Alu -14 295 1 2252 95 14 14 chr20 23142728 23142862 -49011020 - AluSc SINE Alu -175 134 1 22 88 0 0 chr20 23143285 23143342 -49010540 + AT_rich Low_complexity Low_complexity 1 57 0 32 0 0 0 chr20 23143442 23143474 -49010408 + AT_rich Low_complexity Low_complexity 1 32 0 1886 84 0 4 chr20 23144912 23145149 -49008733 - AluSx SINE Alu -76 236 1 2080 129 11 0 chr20 23145746 23146033 -49007849 + AluSg SINE Alu 1 290 -20 2400 85 0 3 chr20 23146611 23146918 -49006964 + AluSx SINE Alu 1 306 -6 272 273 202 0 chr20 23147320 23147419 -49006463 + MIR SINE MIR 35 153 -55 1622 148 93 0 chr20 23148448 23148739 -49005143 - L1PA16 LINE L1 -22 6144 5827 1388 195 47 112 chr20 23149303 23149597 -49004285 - LTR26E LTR ERV1 -3 619 297 816 145 8 0 chr20 23149597 23149721 -49004161 - FLAM_C SINE Alu -4 129 5 1388 195 47 112 chr20 23149721 23150000 -49003882 - LTR26E LTR ERV1 -325 297 1 497 146 56 97 chr20 23151314 23151458 -49002424 - LTR37A LTR ERV1 0 426 289 252 116 7 275 chr20 23151477 23151615 -49002267 - LTR37A LTR ERV1 -241 185 85 2368 86 0 0 chr20 23151651 23151942 -49001940 - AluSc SINE Alu -18 291 1 2200 106 20 0 chr20 23152075 23152378 -49001504 - AluSx SINE Alu -3 309 1 2236 179 141 2 chr20 23152480 23152898 -49000984 - MER70B LTR ERVL -102 476 1 317 338 99 31 chr20 23152920 23153334 -49000548 + L2 LINE L2 2328 2769 -545 2349 66 0 33 chr20 23154077 23154379 -48999503 + AluY SINE Alu 1 292 -19 1696 171 22 0 chr20 23154731 23155005 -48998877 - AluJo SINE Alu -8 304 25 612 174 136 0 chr20 23155015 23155147 -48998735 - L1MA10 LINE L1 -3 6331 6182 2093 127 115 0 chr20 23155156 23155494 -48998388 - MER51B LTR ERV1 0 377 1 3319 124 148 151 chr20 23155498 23155775 -48998107 - MER51B-int LTR ERV1 -2 7814 7538 2623 24 7 3 chr20 23155775 23156073 -48997809 + AluY SINE Alu 1 299 -12 3319 124 148 151 chr20 23156073 23156705 -48997177 - MER51B-int LTR ERV1 -278 7538 6907 2379 112 0 0 chr20 23156709 23157021 -48996861 - AluSx SINE Alu 0 312 1 4424 147 20 11 chr20 23157022 23157986 -48995896 - MER51B-int LTR ERV1 -997 6736 5759 5746 13 0 21 chr20 23159973 23160008 -48993874 - SVA Other Other 0 1386 1352 378 0 0 0 chr20 23160008 23160050 -48993832 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 5746 13 0 21 chr20 23160050 23160638 -48993244 - SVA Other Other -34 1352 776 2158 122 3 10 chr20 23160932 23161235 -48992647 - AluSx SINE Alu -11 301 1 216 97 0 0 chr20 23161331 23161362 -48992520 + (A)n Simple_repeat Simple_repeat 1 31 0 1051 241 148 14 chr20 23161872 23162338 -48991544 + L2 LINE L2 2690 3281 -32 1728 246 114 9 chr20 23162889 23163470 -48990412 + L1MC4 LINE L1 7202 7843 -199 2424 97 0 0 chr20 23163509 23163817 -48990065 - AluSx SINE Alu -4 308 1 366 44 0 0 chr20 23164168 23164213 -48989669 + MADE1 DNA Mariner 36 80 0 346 292 69 15 chr20 23164221 23164351 -48989531 - L2 LINE L2 -25 3288 3152 479 261 39 72 chr20 23164398 23164578 -48989304 + MER5A DNA MER1_type 1 174 -15 430 250 50 89 chr20 23164417 23164597 -48989285 - MER5A DNA MER1_type -5 184 12 * 2392 103 3 0 chr20 23164653 23164955 -48988927 + AluSx SINE Alu 1 303 -9 204 256 0 0 chr20 23166135 23166174 -48987708 - MIR SINE MIR -140 68 30 321 78 39 0 chr20 23166544 23166595 -48987287 - Charlie8 DNA MER1_type -2222 195 143 251 175 18 0 chr20 23166645 23166702 -48987180 + (CATATA)n Simple_repeat Simple_repeat 2 59 0 1830 143 10 10 chr20 23167066 23167359 -48986523 + AluJo SINE Alu 1 293 -19 1973 129 7 3 chr20 23167676 23167962 -48985920 - AluSx SINE Alu -25 287 1 745 176 37 0 chr20 23168416 23168552 -48985330 - MER3 DNA MER1_type -68 141 1 987 80 0 0 chr20 23169392 23169543 -48984339 + (TA)n Simple_repeat Simple_repeat 1 151 0 2304 98 7 0 chr20 23169696 23169993 -48983889 - AluSc SINE Alu -9 300 2 2054 148 24 9 chr20 23170945 23171300 -48982582 - MLT1A1 LTR MaLR -4 501 1 26 64 0 0 chr20 23172152 23172199 -48981683 + AT_rich Low_complexity Low_complexity 1 47 0 1991 84 73 0 chr20 23172286 23172547 -48981335 + AluSg SINE Alu 1 280 -30 328 248 148 0 chr20 23172904 23173005 -48980877 + L2 LINE L2 3197 3312 -1 395 315 135 0 chr20 23173046 23173224 -48980658 + MIR SINE MIR 48 249 -13 2141 117 17 3 chr20 23173348 23173648 -48980234 + AluSx SINE Alu 1 304 -8 2300 95 10 0 chr20 23174094 23174389 -48979493 + AluSq SINE Alu 2 299 -14 423 273 27 0 chr20 23174618 23174728 -48979154 - MIR3 SINE MIR -7 201 89 648 162 0 0 chr20 23174803 23174902 -48978980 + FLAM_C SINE Alu 34 132 -11 1665 151 39 0 chr20 23175659 23175943 -48977939 - L1MC3 LINE L1 -19 7766 7472 2000 191 97 39 chr20 23175947 23176121 -48977761 - L1MC3 LINE L1 -763 7022 6860 2154 104 0 7 chr20 23176121 23176418 -48977464 - AluSc SINE Alu -14 295 1 2000 191 97 39 chr20 23176418 23176464 -48977418 - L1MC3 LINE L1 -925 6860 6818 2337 88 3 13 chr20 23176464 23176771 -48977111 - AluSq SINE Alu -9 304 1 2000 191 97 39 chr20 23176771 23177084 -48976798 - L1MC3 LINE L1 -967 6818 6457 2101 142 7 0 chr20 23177118 23177421 -48976461 + AluJb SINE Alu 1 305 -7 277 264 100 45 chr20 23177444 23177554 -48976328 + MER77 LTR ERV1 82 197 -408 * 850 226 41 98 chr20 23177527 23177772 -48976110 + MER21B LTR ERV1 98 336 -269 3775 150 64 51 chr20 23177790 23178535 -48975347 - L1MC3 LINE L1 -743 5403 5291 2074 103 7 0 chr20 23178535 23178808 -48975074 - AluSq SINE Alu -7 306 32 3775 150 64 51 chr20 23178808 23179114 -48974768 - L1MC3 LINE L1 -855 5291 4990 1753 181 58 65 chr20 23179120 23179567 -48974315 + L1MB7 LINE L1 5734 6177 -7 483 234 72 9 chr20 23180031 23180142 -48973740 + L2 LINE L2 3190 3307 -6 2283 102 0 10 chr20 23180810 23181114 -48972768 + AluSx SINE Alu 1 301 -11 26 30 0 0 chr20 23181543 23181576 -48972306 + AT_rich Low_complexity Low_complexity 1 33 0 375 231 81 43 chr20 23181760 23181899 -48971983 - MIR SINE MIR -56 152 45 368 281 45 54 chr20 23182372 23182596 -48971286 + L1MC4a LINE L1 5813 6034 -1774 40 59 0 0 chr20 23183015 23183083 -48970799 + AT_rich Low_complexity Low_complexity 1 68 0 1576 153 160 0 chr20 23183148 23183416 -48970466 + AluSx SINE Alu 1 311 -1 1890 145 3 0 chr20 23183642 23183931 -48969951 - AluSx SINE Alu -22 290 1 297 294 132 84 chr20 23184065 23184745 -48969137 - L2 LINE L2 -2 3270 2558 951 211 32 16 chr20 23185109 23185299 -48968583 + MER58A DNA MER1_type 32 224 0 2275 181 84 16 chr20 23186015 23186502 -48967380 - MLT2B1 LTR ERVL 0 520 1 2457 53 3 3 chr20 23187257 23187560 -48966322 + AluSc SINE Alu 1 303 -6 189 0 0 0 chr20 23190250 23190271 -48963611 + (GA)n Simple_repeat Simple_repeat 2 22 0 2309 108 3 0 chr20 23190657 23190964 -48962918 + AluSx SINE Alu 1 308 -4 631 264 86 15 chr20 23191034 23191231 -48962651 + MIR SINE MIR 26 236 -26 2128 96 61 0 chr20 23191276 23191569 -48962313 + AluSx SINE Alu 1 311 -1 204 125 0 0 chr20 23191633 23191665 -48962217 + (CATATA)n Simple_repeat Simple_repeat 5 36 0 291 225 0 0 chr20 23192032 23192112 -48961770 + L1MC4a LINE L1 5265 5344 -802 3669 120 45 0 chr20 23192122 23192671 -48961211 - L1PA16 LINE L1 0 6166 5593 1295 131 0 15 chr20 23192671 23192859 -48961023 - AluSg/x SINE Alu -8 304 118 441 103 0 0 chr20 23192859 23192917 -48960965 - Alu SINE Alu -253 59 2 1681 107 41 0 chr20 23192929 23193173 -48960709 - L1PA16 LINE L1 -568 5598 5345 467 204 43 143 chr20 23193282 23193512 -48960370 + L2 LINE L2 3103 3309 -4 1070 246 40 113 chr20 23193521 23193732 -48960150 + L1MC4a LINE L1 5398 5623 -2185 2333 107 0 0 chr20 23193732 23194031 -48959851 + AluSq SINE Alu 1 299 -14 1070 246 40 113 chr20 23194031 23194421 -48959461 + L1MC4a LINE L1 5623 5955 -1853 678 254 123 4 chr20 23194588 23194816 -48959066 + MIR SINE MIR 8 262 0 2408 56 0 0 chr20 23194889 23195173 -48958709 - AluY SINE Alu -16 295 12 250 219 123 27 chr20 23195641 23195714 -48958168 - L1ME3 LINE L1 -3 6159 6080 192 40 0 0 chr20 23196047 23196072 -48957810 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 1008 268 145 40 chr20 23197724 23198123 -48955759 + MLT1J LTR MaLR 1 456 -55 1984 129 0 7 chr20 23198123 23198439 -48955443 - AluSx SINE Alu 0 314 1 1008 268 145 40 chr20 23198439 23198493 -48955389 + MLT1J LTR MaLR 456 503 -8 3051 185 58 25 chr20 23198552 23199222 -48954660 + L1ME1 LINE L1 5470 6161 -5 567 237 109 130 chr20 23199536 23200097 -48953785 + MLT1F LTR MaLR 1 549 -6 2758 153 90 30 chr20 23202052 23202654 -48951228 - LTR65 LTR ERV1 -1 668 31 531 246 56 39 chr20 23203112 23203291 -48950591 - L2 LINE L2 -34 3279 3098 485 150 12 0 chr20 23203292 23203372 -48950510 + MER5A DNA MER1_type 1 81 -108 1635 251 207 33 chr20 23203382 23203429 -48950453 - L2 LINE L2 -464 2850 2813 668 223 63 69 chr20 23203429 23203604 -48950278 - MER5B DNA MER1_type -2 176 3 1635 251 207 33 chr20 23203604 23204381 -48949501 - L2 LINE L2 -501 2813 1882 2277 120 0 0 chr20 23204388 23204696 -48949186 + AluSg SINE Alu 1 308 -2 521 290 26 31 chr20 23205009 23205202 -48948680 - Charlie8 DNA MER1_type -2225 192 1 835 196 0 0 chr20 23205220 23205363 -48948519 - FLAM_C SINE Alu 0 143 1 2197 92 7 0 chr20 23205503 23205835 -48948047 - AluSp SINE Alu 0 334 1 1677 96 9 17 chr20 23205846 23206076 -48947806 - AluSg/x SINE Alu 0 312 85 1114 182 54 0 chr20 23206261 23206464 -48947418 - L1PB4 LINE L1 -1 6155 5942 2434 80 0 3 chr20 23206745 23207045 -48946837 - AluSc SINE Alu -10 299 1 1205 199 53 136 chr20 23207081 23207131 -48946751 - L1ME2 LINE L1 -13 6545 6492 198 0 0 0 chr20 23207131 23207153 -48946729 + (TATG)n Simple_repeat Simple_repeat 3 24 0 1205 199 53 136 chr20 23207153 23207985 -48945897 - L1ME2 LINE L1 -66 6492 5716 2146 70 0 22 chr20 23208006 23208278 -48945604 + AluSx SINE Alu 3 268 -44 1156 124 0 30 chr20 23208278 23208438 -48945444 - AluSx SINE Alu -155 157 1 1728 225 34 64 chr20 23208441 23209036 -48944846 - L1ME2 LINE L1 -2154 4386 3810 847 236 24 20 chr20 23209036 23209286 -48944596 - L1ME2 LINE L1 -3057 3483 3233 308 131 0 16 chr20 23209308 23209369 -48944513 + (TTCC)n Simple_repeat Simple_repeat 3 62 0 967 172 31 0 chr20 23209375 23209538 -48944344 - AluJ SINE Alu -13 299 132 1883 146 0 27 chr20 23209567 23209868 -48944014 + AluSx SINE Alu 1 293 -19 748 172 0 31 chr20 23209884 23210012 -48943870 - AluJ SINE Alu -187 125 2 1757 227 52 48 chr20 23210055 23210525 -48943357 - L1ME2 LINE L1 -3417 3123 2647 2242 73 0 24 chr20 23210525 23210843 -48943039 + AluY SINE Alu 1 311 0 1757 227 52 48 chr20 23210843 23210947 -48942935 - L1ME2 LINE L1 -3893 2647 2545 1087 229 46 26 chr20 23210947 23211249 -48942633 - L1ME2 LINE L1 -5800 921 614 239 243 33 105 chr20 23212247 23212399 -48941483 + L2 LINE L2 3169 3309 -4 260 265 116 48 chr20 23213117 23213264 -48940618 + HERVL LTR ERVL 985 1141 -4623 812 196 17 113 chr20 23213953 23214254 -48939628 + LTR41 LTR ERVL 502 773 0 360 250 71 56 chr20 23214644 23214840 -48939042 + HERVL LTR ERVL 408 618 -4879 1051 302 63 77 chr20 23214908 23215377 -48938505 + HERVL LTR ERVL 775 1230 -4534 2103 172 39 21 chr20 23215377 23215760 -48938122 - MLT1B LTR MaLR 0 390 1 1051 302 63 77 chr20 23215760 23216084 -48937798 + HERVL LTR ERVL 1230 1557 -4207 1224 328 28 2 chr20 23216117 23216553 -48937329 + HERVL LTR ERVL 1647 2093 -3671 2075 240 69 56 chr20 23216554 23216613 -48937269 - L1MEc LINE L1 -3638 3319 3262 2127 191 17 6 chr20 23216613 23216974 -48936908 + MLT1A1 LTR MaLR 1 365 0 2075 240 69 56 chr20 23216974 23217388 -48936494 - L1MEc LINE L1 -3695 3262 2855 2592 62 0 3 chr20 23217388 23217695 -48936187 - AluY SINE Alu -5 306 1 2075 240 69 56 chr20 23217695 23217839 -48936043 - L1MEc LINE L1 -4102 2855 2714 804 66 9 0 chr20 23217839 23217945 -48935937 - L1MA2 LINE L1 0 6304 6198 2075 240 69 56 chr20 23217945 23218019 -48935863 - L1MEc LINE L1 -4243 2714 2642 2278 120 0 13 chr20 23218019 23218335 -48935547 - AluSx SINE Alu 0 312 1 2075 240 69 56 chr20 23218335 23219157 -48934725 - L1MEc LINE L1 -4315 2642 1823 1339 33 0 0 chr20 23219170 23219322 -48934560 - AluY SINE Alu -12 299 148 1158 221 85 42 chr20 23219322 23219769 -48934113 - L1MEc LINE L1 -5179 1680 1215 25 0 0 0 chr20 23219773 23219798 -48934084 + AT_rich Low_complexity Low_complexity 1 25 0 308 151 0 0 chr20 23219799 23219852 -48934030 - MER41B LTR ERV1 -101 534 482 3976 50 2 2 chr20 23219856 23220320 -48933562 - L1PA8 LINE L1 0 6172 5709 2382 102 0 0 chr20 23221064 23221369 -48932513 - AluSq SINE Alu -8 305 1 23 68 0 0 chr20 23221501 23221545 -48932337 + AT_rich Low_complexity Low_complexity 1 44 0 747 95 9 0 chr20 23221546 23221651 -48932231 - L1MA5A LINE L1 -5 6292 6187 573 136 23 0 chr20 23221702 23221790 -48932092 - 5S rRNA rRNA -31 90 1 2225 113 3 0 chr20 23222075 23222368 -48931514 - AluSx SINE Alu -15 297 4 473 221 29 37 chr20 23223210 23223346 -48930536 + MLT1J LTR MaLR 377 511 0 23 0 0 0 chr20 23224491 23224514 -48929368 + AT_rich Low_complexity Low_complexity 1 23 0 2162 121 3 6 chr20 23224786 23225099 -48928783 - AluJb SINE Alu 0 312 1 283 167 19 0 chr20 23225755 23225809 -48928073 - MER112 DNA MER1_type -185 75 21 1090 257 53 48 chr20 23225851 23226000 -48927882 - MER110 LTR ERV1 -14 477 330 1166 166 10 10 chr20 23226000 23226205 -48927677 + L1MC1 LINE L1 6121 6325 -8 1090 257 53 48 chr20 23226205 23226468 -48927414 - MER110 LTR ERV1 -161 330 63 2284 101 0 0 chr20 23227145 23227441 -48926441 + AluSg SINE Alu 1 296 -14 2473 67 0 3 chr20 23227463 23227763 -48926119 - AluY SINE Alu -12 299 1 288 0 0 0 chr20 23227993 23228025 -48925857 + (CA)n Simple_repeat Simple_repeat 2 33 0 832 199 0 0 chr20 23228145 23228286 -48925596 + FLAM_C SINE Alu 2 142 -1 2172 109 93 13 chr20 23229261 23229573 -48924309 - MER1B DNA MER1_type 0 337 1 2043 166 84 49 chr20 23229595 23230046 -48923836 - MLT1C LTR MaLR 0 467 1 2363 82 0 0 chr20 23230066 23230357 -48923525 - AluSg SINE Alu -15 295 5 2083 209 75 82 chr20 23230439 23231133 -48922749 - L1ME1 LINE L1 -5 6095 5407 2324 101 0 16 chr20 23231147 23231464 -48922418 - AluSx SINE Alu 0 312 1 2197 208 109 29 chr20 23231484 23232248 -48921634 - L1ME1 LINE L1 -2790 3290 2466 1830 116 30 51 chr20 23232241 23232317 -48921565 + L1 LINE L1 4428 4504 -1642 * 1188 207 161 23 chr20 23232317 23232621 -48921261 - MER7A DNA MER2_type -1 345 2 1830 116 30 51 chr20 23232621 23232879 -48921003 + L1 LINE L1 4504 4755 -1391 1678 134 19 1 chr20 23232879 23233188 -48920694 - MER46B DNA MER2_type 0 236 4 3360 123 43 5 chr20 23233189 23233749 -48920133 + L1 LINE L1 4752 5332 -814 2234 261 81 58 chr20 23235739 23236353 -48917529 - L1ME1 LINE L1 -4440 1640 1042 2355 95 0 0 chr20 23236353 23236647 -48917235 - AluSx SINE Alu -13 299 6 2234 261 81 58 chr20 23236647 23237535 -48916347 - L1ME1 LINE L1 -5038 1042 83 2277 106 0 0 chr20 23237535 23237828 -48916054 - AluSx SINE Alu -19 293 1 2234 261 81 58 chr20 23237828 23237913 -48915969 - L1ME1 LINE L1 -5997 83 1 246 136 0 0 chr20 23238571 23238615 -48915267 + (T)n Simple_repeat Simple_repeat 1 44 0 247 281 94 62 chr20 23239132 23239260 -48914622 - L2 LINE L2 0 3272 3141 255 329 36 7 chr20 23239444 23239581 -48914301 + MIR SINE MIR 103 243 -19 230 0 33 0 chr20 23240043 23240073 -48913809 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 558 255 56 35 chr20 23240816 23241047 -48912835 - L1MC4a LINE L1 -1980 5828 5593 2245 114 0 0 chr20 23241842 23242132 -48911750 - AluSg SINE Alu -20 290 1 499 222 23 171 chr20 23242176 23242392 -48911490 - MER91B DNA MER1_type -5 185 2 306 121 45 0 chr20 23243303 23243369 -48910513 - L1MB3 LINE L1 0 6183 6115 718 176 145 63 chr20 23243372 23243531 -48910351 + AluJo SINE Alu 2 173 -139 1211 170 29 125 chr20 23243534 23243910 -48909972 + MLT1A1 LTR MaLR 26 365 0 2487 234 81 7 chr20 23243910 23244648 -48909234 - L1MEc LINE L1 -2390 4150 3358 1594 203 3 16 chr20 23244660 23244966 -48908916 - AluJb SINE Alu -9 303 2 809 250 59 45 chr20 23244970 23245458 -48908424 - L1MEc LINE L1 -3931 2641 2168 1917 91 136 0 chr20 23245579 23245844 -48908038 - AluY SINE Alu 0 301 1 186 43 0 0 chr20 23246025 23246048 -48907834 + (TGG)n Simple_repeat Simple_repeat 1 23 0 288 0 0 0 chr20 23246048 23246080 -48907802 + (TG)n Simple_repeat Simple_repeat 2 33 0 257 269 30 0 chr20 23246100 23246167 -48907715 - L1MEc LINE L1 -4513 2027 1959 877 217 13 94 chr20 23346761 23347060 -48806822 - L1MC4 LINE L1 0 8042 7768 2001 101 26 13 chr20 23347082 23347658 -48806224 + MER61-int LTR ERV1 1923 2635 -2582 1733 97 120 0 chr20 23347658 23347917 -48805965 + MER51B LTR ERV1 88 377 0 1149 224 104 84 chr20 23348089 23348540 -48805342 - MLT1H LTR MaLR -39 510 51 227 330 0 21 chr20 23348657 23348754 -48805128 - LTR67 LTR ERVL -2 555 461 281 118 196 0 chr20 23350869 23350920 -48802962 + LTR67 LTR ERVL 497 557 0 241 116 70 0 chr20 23350949 23350992 -48802890 + MER63 DNA MER1_type 14 685 -377 340 239 22 22 chr20 23350992 23351084 -48802798 - L1MC/D LINE L1 -605 5559 5468 375 213 0 64 chr20 23352512 23352579 -48801303 - MLT1H LTR MaLR 0 549 479 3198 153 49 21 chr20 23352579 23353189 -48800693 - L1MC1 LINE L1 0 6333 5707 2232 121 36 36 chr20 23353189 23353553 -48800329 - THE1B LTR MaLR 0 364 1 11317 87 34 14 chr20 23353553 23355103 -48798779 - THE1B-int LTR MaLR 0 1580 1 2050 134 6 34 chr20 23355103 23355431 -48798451 - THE1B LTR MaLR 0 364 46 232 167 0 37 chr20 23355437 23355491 -48798391 + L1PB4 LINE L1 6093 6144 -12 296 109 0 0 chr20 23355493 23355539 -48798343 - THE1B LTR MaLR -382 46 1 1670 161 14 21 chr20 23355539 23355830 -48798052 - L1MC1 LINE L1 -622 5711 5423 575 260 89 65 chr20 23355922 23356168 -48797714 - MLT1H LTR MaLR -222 327 76 757 194 0 0 chr20 23356282 23356416 -48797466 + L1PB4 LINE L1 6021 6154 -2 435 285 29 0 chr20 23357162 23357299 -48796583 - L1ME3A LINE L1 -3 6167 6027 888 200 43 143 chr20 23357302 23357762 -48796120 - L1ME3A LINE L1 -263 5907 5494 396 0 0 0 chr20 23357805 23357849 -48796033 + (GA)n Simple_repeat Simple_repeat 1 44 0 22 35 0 0 chr20 23357886 23357915 -48795967 + AT_rich Low_complexity Low_complexity 1 29 0 254 203 0 181 chr20 23359262 23359400 -48794482 + MLT1H LTR MaLR 421 533 -16 2396 70 0 35 chr20 23359655 23359969 -48793913 - AluY SINE Alu -8 303 1 869 192 32 41 chr20 23360276 23360506 -48793376 - L1ME2 LINE L1 -126 6038 5800 618 242 37 91 chr20 23361133 23361631 -48792251 + MLT2F LTR ERVL 5 663 0 706 288 79 62 chr20 23362153 23362766 -48791116 - MER49 LTR ERV1 -81 842 21 258 170 64 0 chr20 23362772 23362819 -48791063 - MER81 DNA DNA -29 85 36 298 195 49 80 chr20 23362840 23362963 -48790919 + MLT1L LTR MaLR 460 610 -5 262 222 183 94 chr20 23362975 23363155 -48790727 + MARNA DNA Mariner 380 575 -11 780 191 7 0 chr20 23363775 23363911 -48789971 + MLT1H LTR MaLR 400 536 -13 858 246 22 0 chr20 23364346 23364525 -48789357 - MER3 DNA MER1_type -26 183 1 448 282 129 12 chr20 23365927 23366090 -48787792 - MIR SINE MIR -4 258 77 190 313 117 28 chr20 23366125 23366304 -48787578 + L2 LINE L2 1595 1789 -1525 180 286 79 16 chr20 23366586 23366649 -48787233 + L2 LINE L2 2989 3055 -217 2490 196 86 8 chr20 23366689 23367215 -48786667 - MLT1F1 LTR MaLR 0 567 1 2163 144 31 0 chr20 23367330 23367711 -48786171 - L1MB3 LINE L1 -1 6182 5790 977 34 17 0 chr20 23367711 23367827 -48786055 + L1PA7 LINE L1 6031 6150 -4 1691 164 58 0 chr20 23367827 23368119 -48785763 - L1MB3 LINE L1 -384 5799 5491 2213 102 0 3 chr20 23368125 23368429 -48785453 - AluY SINE Alu -4 307 5 1675 173 7 17 chr20 23368432 23368733 -48785149 - AluJb SINE Alu -14 298 1 301 241 0 0 chr20 23368756 23368814 -48785068 + L2 LINE L2 3215 3272 0 255 225 38 38 chr20 23369046 23369126 -48784756 - Charlie8 DNA MER1_type -2258 159 80 281 223 50 129 chr20 23369400 23369539 -48784343 + MLT1H LTR MaLR 419 546 -3 2668 229 29 62 chr20 23369728 23370178 -48783704 - L1ME1 LINE L1 -5 6161 5754 2071 109 0 22 chr20 23370178 23370490 -48783392 + AluSx SINE Alu 1 305 -7 2668 229 29 62 chr20 23370490 23370887 -48782995 - L1ME1 LINE L1 -412 5754 5346 461 252 191 0 chr20 23371070 23371217 -48782665 + MIR SINE MIR 78 252 -10 3574 160 30 8 chr20 23371295 23371952 -48781930 + L1MC2 LINE L1 5663 6334 -10 288 0 0 0 chr20 23372044 23372076 -48781806 + (TG)n Simple_repeat Simple_repeat 2 33 0 221 125 56 42 chr20 23372158 23372230 -48781652 + (TCTA)n Simple_repeat Simple_repeat 2 74 0 384 268 204 0 chr20 23372253 23372395 -48781487 - MER5A DNA MER1_type -10 179 9 322 288 131 65 chr20 23372624 23372930 -48780952 - MLT1I LTR MaLR -4 405 80 2345 136 53 62 chr20 23373216 23373650 -48780232 + MSTB1 LTR MaLR 1 430 -2 918 188 59 20 chr20 23373701 23373903 -48779979 - MLT1A1 LTR MaLR 0 365 156 250 83 0 42 chr20 23373925 23373973 -48779909 + (TTC)n Simple_repeat Simple_repeat 3 48 0 823 169 0 0 chr20 23373983 23374107 -48779775 - AluJb SINE Alu -187 125 2 578 197 129 27 chr20 23374111 23374258 -48779624 - MLT1A1 LTR MaLR -212 162 1 334 139 88 31 chr20 23374260 23374339 -48779543 + L1ME LINE L1 5510 5580 -586 889 188 81 67 chr20 23374428 23374746 -48779136 - L1ME2 LINE L1 -1 6163 5827 826 246 183 43 chr20 23374822 23375075 -48778807 + LTR16C LTR ERVL 36 252 -239 2075 69 0 18 chr20 23375075 23375350 -48778532 - AluY SINE Alu -5 306 37 826 246 183 43 chr20 23375350 23375494 -48778388 + LTR16C LTR ERVL 252 489 -2 386 183 20 24 chr20 23376217 23376314 -48777568 + L1ME2 LINE L1 6069 6170 0 467 288 131 14 chr20 23377121 23377343 -48776539 + MLT1L LTR MaLR 200 447 -168 770 199 6 50 chr20 23377404 23377438 -48776444 - MER5A DNA MER1_type -35 154 120 1935 212 78 23 chr20 23377438 23377924 -48775958 + MLT2B2 LTR ERVL 3 515 0 770 199 6 50 chr20 23377924 23378050 -48775832 - MER5A DNA MER1_type -69 120 1 30 0 0 0 chr20 23378128 23378158 -48775724 + AT_rich Low_complexity Low_complexity 1 30 0 472 267 67 6 chr20 23378345 23378510 -48775372 + MER97a DNA MER1_type? 1 175 -719 2663 236 55 24 chr20 23378967 23379839 -48774043 + L1MC4a LINE L1 6850 7772 -13 977 189 18 54 chr20 23379855 23379987 -48773895 + MIR SINE MIR 28 150 -112 1757 127 4 0 chr20 23379987 23380254 -48773628 + AluJb SINE Alu 40 307 -5 977 189 18 54 chr20 23380254 23380343 -48773539 + MIR SINE MIR 150 241 -21 787 189 116 0 chr20 23382059 23382223 -48771659 - MER5A DNA MER1_type 0 189 7 1521 224 25 78 chr20 23382689 23383203 -48770679 + L1ME1 LINE L1 5596 6082 -84 310 261 130 29 chr20 23383139 23383277 -48770605 + L1MA10 LINE L1 6176 6327 -7 * 2221 97 3 0 chr20 23383807 23384115 -48769767 - AluSq SINE Alu -4 309 1 298 333 34 8 chr20 23384611 23384728 -48769154 + MIR SINE MIR 20 139 -123 381 306 82 11 chr20 23384960 23385143 -48768739 + Charlie8 DNA MER1_type 47 242 -2175 2086 189 128 22 chr20 23385297 23385804 -48768078 - MLT1E2 LTR MaLR -2 624 64 850 184 37 53 chr20 23385804 23385948 -48767934 + MLT1A2 LTR MaLR 1 143 -231 2632 135 31 2 chr20 23385948 23386364 -48767518 - MSTA LTR MaLR 0 428 1 850 184 37 53 chr20 23386364 23386409 -48767473 + MLT1A2 LTR MaLR 143 187 -187 750 109 14 14 chr20 23386409 23386547 -48767335 + (TTTC)n Simple_repeat Simple_repeat 1 138 0 725 224 120 6 chr20 23386562 23386745 -48767137 + MLT1A2 LTR MaLR 162 365 0 205 67 0 0 chr20 23387795 23387825 -48766057 - L2 LINE L2 -253 3060 3031 1018 242 40 40 chr20 23387851 23388116 -48765766 - LTR16C LTR ERVL -25 466 199 2944 90 57 9 chr20 23388116 23388498 -48765384 + MLT2A1 LTR ERVL 1 406 -38 360 0 0 0 chr20 23388498 23388538 -48765344 + (TA)n Simple_repeat Simple_repeat 2 41 0 2944 90 57 9 chr20 23388538 23388579 -48765303 + MLT2A1 LTR ERVL 406 444 0 1018 242 40 40 chr20 23388579 23388615 -48765267 - LTR16C LTR ERVL -291 200 165 229 281 18 0 chr20 23388756 23388813 -48765069 + MIR SINE MIR 10 67 -195 1929 130 27 0 chr20 23388841 23389142 -48764740 - AluSx SINE Alu -3 309 1 1513 241 117 28 chr20 23389153 23389625 -48764257 - L1ME3A LINE L1 0 6170 5657 201 289 0 0 chr20 23389675 23389727 -48764155 + L2 LINE L2 3217 3268 -4 656 94 85 0 chr20 23390642 23390748 -48763134 - L1PA16 LINE L1 -10 6156 6042 525 298 150 48 chr20 23391094 23391198 -48762684 - L2 LINE L2 0 3272 3180 2277 141 13 16 chr20 23391198 23391574 -48762308 + THE1C LTR MaLR 1 375 0 525 298 150 48 chr20 23391574 23391862 -48762020 - L2 LINE L2 -92 3180 2840 22 0 0 0 chr20 23392945 23392967 -48760915 + AT_rich Low_complexity Low_complexity 1 22 0 197 341 57 11 chr20 23393313 23393401 -48760481 - MIR SINE MIR -138 124 33 228 380 0 10 chr20 23393476 23393576 -48760306 - MIR3 SINE MIR -23 185 87 304 341 37 18 chr20 23393626 23393790 -48760092 + MIR3 SINE MIR 42 208 0 2796 136 12 9 chr20 23394622 23395049 -48758833 + MSTC LTR MaLR 1 428 0 622 266 11 5 chr20 23395271 23395449 -48758433 + MLT1G1 LTR MaLR 1 225 -324 460 146 138 27 chr20 23395542 23395704 -48758178 + MLT1G LTR MaLR 361 588 -2 411 309 138 16 chr20 23395735 23395923 -48757959 + MIR SINE MIR 45 255 -7 255 31 0 0 chr20 23396067 23396099 -48757783 + (TG)n Simple_repeat Simple_repeat 1 32 0 2030 89 11 0 chr20 23396151 23396421 -48757461 - AluSx SINE Alu -39 273 1 1118 243 55 44 chr20 23396717 23397153 -48756729 - L1ME3A LINE L1 -5 6165 5725 2470 49 0 0 chr20 23397466 23397773 -48756109 + AluY SINE Alu 1 307 -4 1249 221 84 43 chr20 23398087 23398428 -48755454 - HsTC2 DNA Tc2 -36 1862 1454 1740 176 11 22 chr20 23398428 23398786 -48755096 - L1MA7 LINE L1 0 6291 5938 1249 221 84 43 chr20 23398786 23398986 -48754896 - HsTC2 DNA Tc2 -444 1454 1264 318 311 7 47 chr20 23398984 23399132 -48754750 - HsTC2 DNA Tc2 -1751 147 6 * 298 232 7 126 chr20 23400445 23400596 -48753286 + MLT1F LTR MaLR 410 542 0 1432 146 35 178 chr20 23400905 23401384 -48752498 - MLT2D LTR ERVL -3 411 1 947 208 85 5 chr20 23401589 23401801 -48752081 - L1ME3A LINE L1 -5 6165 5937 1073 257 184 2 chr20 23401809 23402294 -48751588 + MLT1G1 LTR MaLR 1 592 -3 1104 279 65 0 chr20 23402298 23402639 -48751243 - L1ME3A LINE L1 -239 5931 5569 393 289 129 10 chr20 23403144 23403345 -48750537 - HsTC2 DNA Tc2 -1660 238 14 206 189 38 0 chr20 23403713 23403766 -48750116 + GA-rich Low_complexity Low_complexity 2 56 0 235 290 65 19 chr20 23403963 23404070 -48749812 + MIR SINE MIR 140 251 -11 869 210 58 15 chr20 23404338 23404543 -48749339 + MIR SINE MIR 43 256 -6 4942 166 21 13 chr20 23404714 23405570 -48748312 + MER49 LTR ERV1 6 868 -55 750 192 0 0 chr20 23405570 23405734 -48748148 + FRAM SINE Alu 1 74 0 1590 173 7 7 chr20 23405824 23406124 -48747758 - AluJb SINE Alu -5 307 8 1777 262 49 2 chr20 23406424 23406871 -48747011 + MLT1H LTR MaLR 12 479 -70 2269 99 0 0 chr20 23407798 23408101 -48745781 - AluSg SINE Alu -7 303 1 374 229 110 17 chr20 23408466 23408584 -48745298 - L1ME LINE L1 -500 5621 5493 538 244 23 8 chr20 23409410 23409541 -48744341 + MER94 DNA DNA 2 134 0 995 134 43 37 chr20 23410379 23410444 -48743438 - MLT1D LTR MaLR -317 188 125 2472 142 65 2 chr20 23410444 23410845 -48743037 - MSTB LTR MaLR 0 426 1 995 134 43 37 chr20 23410845 23410966 -48742916 - MLT1D LTR MaLR -380 125 1 1115 278 32 54 chr20 23412137 23412337 -48741545 - LTR16C LTR ERVL -9 482 279 661 224 106 12 chr20 23412337 23412507 -48741375 + MER5A DNA MER1_type 4 189 0 1115 278 32 54 chr20 23412507 23412748 -48741134 - LTR16C LTR ERVL -212 279 51 2612 158 19 0 chr20 23412974 23413392 -48740490 + MSTB LTR MaLR 1 426 0 1554 47 0 0 chr20 23413590 23413780 -48740102 - L1PA5 LINE L1 0 6154 5965 2559 155 29 0 chr20 23414053 23414473 -48739409 - MSTB1 LTR MaLR 0 432 1 305 316 138 44 chr20 23414807 23415050 -48738832 - LTR16A LTR ERVL -93 357 75 740 206 40 23 chr20 23415050 23415225 -48738657 - MER45A DNA AcHobo 0 178 1 305 316 138 44 chr20 23415225 23415301 -48738581 - LTR16A LTR ERVL -375 75 8 747 314 12 21 chr20 23415411 23415653 -48738229 + LTR16C LTR ERVL 252 491 0 1460 256 73 7 chr20 23416275 23416685 -48737197 + LTR16A LTR ERVL 12 448 -2 373 186 72 21 chr20 23416858 23416955 -48736927 - MER46C DNA MER2_type -235 103 2 1752 227 65 38 chr20 23417080 23417684 -48736198 - L1ME2 LINE L1 -2 6162 5543 356 308 24 19 chr20 23418090 23418209 -48735673 - MIR3 SINE MIR -48 160 41 1991 167 3 0 chr20 23418209 23418514 -48735368 - AluJo SINE Alu 0 312 7 356 308 24 19 chr20 23418514 23418542 -48735340 - MIR3 SINE MIR -167 41 15 435 297 43 7 chr20 23419213 23419351 -48734531 + MIR3 SINE MIR 44 186 -22 1004 223 143 54 chr20 23419457 23419848 -48734034 + MLT1H LTR MaLR 25 450 -99 4897 157 30 41 chr20 23420032 23421166 -48732716 - L1M4c LINE L1 -4549 1835 714 988 151 11 16 chr20 23421174 23421360 -48732522 - L1M4c LINE L1 -6169 215 31 1194 206 4 14 chr20 23421372 23421648 -48732234 - L1MC/D LINE L1 -750 5609 5337 522 318 46 14 chr20 23422198 23422415 -48731467 + LTR16C LTR ERVL 89 312 -179 2425 184 75 28 chr20 23422467 23423103 -48730779 - L1MC4 LINE L1 -1 8041 7376 371 303 79 0 chr20 23423611 23423763 -48730119 + MIR SINE MIR 97 260 -2 422 306 26 37 chr20 23423774 23423990 -48729892 + MIR SINE MIR 8 221 -41 257 73 0 24 chr20 23424445 23424486 -48729396 - MER5B DNA MER1_type 0 178 139 189 0 0 0 chr20 23424531 23424552 -48729330 + (CA)n Simple_repeat Simple_repeat 2 22 0 1918 220 12 12 chr20 23424573 23424982 -48728900 - MLT2C2 LTR ERVL -55 409 1 708 271 31 0 chr20 23425024 23425315 -48728567 - L1MCa LINE L1 -3293 3133 2834 2329 159 23 26 chr20 23425317 23425744 -48728138 + MSTB LTR MaLR 1 426 0 7266 176 17 90 chr20 23425744 23426203 -48727679 + MSTB-int LTR MaLR 1 492 -1159 444 189 0 0 chr20 23426203 23426277 -48727605 + AluJ/FRAM SINE Alu 222 295 -17 7266 176 17 90 chr20 23426277 23427520 -48726362 + MSTB-int LTR MaLR 492 1646 -5 2319 163 39 5 chr20 23427535 23427945 -48725937 + MSTB LTR MaLR 3 426 0 910 253 7 4 chr20 23427946 23428223 -48725659 - L1MCa LINE L1 -3591 2835 2558 24 53 0 0 chr20 23428227 23428265 -48725617 + AT_rich Low_complexity Low_complexity 1 38 0 654 125 50 0 chr20 23428265 23428385 -48725497 - L1PB1 LINE L1 -8 6859 6734 39957 58 2 2 chr20 23428396 23434529 -48719353 - L1PA5 LINE L1 -8 6146 11 381 156 0 0 chr20 23434534 23434611 -48719271 - L1PB1 LINE L1 -116 6751 6675 * 29205 114 12 55 chr20 23434606 23441045 -48712837 - L1PA7 LINE L1 0 6154 2 13171 185 39 13 chr20 23441043 23446263 -48707619 - L1PB1 LINE L1 -177 6690 1332 * 3579 221 94 6 chr20 23446278 23447339 -48706543 - L1PB1 LINE L1 -5703 1160 6 10992 159 81 6 chr20 23447354 23448252 -48705630 - L1MCa LINE L1 -3947 2479 1649 2608 151 22 0 chr20 23448252 23448669 -48705213 + MSTB LTR MaLR 1 426 0 10992 159 81 6 chr20 23448669 23450075 -48703807 - L1MCa LINE L1 -4777 1649 86 4701 156 37 46 chr20 23450081 23450783 -48703099 - L1MA9 LINE L1 -6 6306 5599 2398 84 0 3 chr20 23450783 23451082 -48702800 - AluY SINE Alu -13 298 1 4701 156 37 46 chr20 23451082 23452027 -48701855 - L1MA9 LINE L1 -713 5599 4671 2019 207 48 9 chr20 23452021 23452558 -48701324 + L1 LINE L1 2577 3134 -3012 * 537 101 13 0 chr20 23452561 23452640 -48701242 - L1MCa LINE L1 -6328 98 19 1922 130 4 4 chr20 23452648 23452925 -48700957 - AluJo SINE Alu -12 300 24 211 380 0 0 chr20 23453257 23453336 -48700546 - MIR SINE MIR -71 191 113 339 336 43 9 chr20 23453868 23453984 -48699898 + MIR3 SINE MIR 40 159 -49 472 292 38 32 chr20 23453990 23454175 -48699707 - MER117 DNA MER1_type -7 190 5 247 220 0 17 chr20 23454175 23454234 -48699648 + MIR3 SINE MIR 150 207 -1 201 238 0 0 chr20 23454370 23454412 -48699470 + MER5B DNA MER1_type 8 49 -129 1868 221 79 21 chr20 23454417 23454938 -48698944 - L1ME3 LINE L1 -6 6156 5606 2571 200 54 36 chr20 23454939 23455437 -48698445 - MER82 DNA MER2_type -1 652 139 1562 182 14 24 chr20 23455437 23455733 -48698149 - AluJb SINE Alu -19 293 1 2571 200 54 36 chr20 23455733 23455865 -48698017 - MER82 DNA MER2_type -514 139 11 403 319 28 0 chr20 23455914 23456055 -48697827 + MER5B DNA MER1_type 32 176 -2 873 152 0 104 chr20 23456830 23456923 -48696959 + MER5A DNA MER1_type 1 61 -128 689 145 47 72 chr20 23456923 23457116 -48696766 - MER53 DNA DNA -1 188 1 873 152 0 104 chr20 23457116 23457233 -48696649 + MER5A DNA MER1_type 61 189 0 484 299 42 69 chr20 23457724 23457985 -48695897 - MIR SINE MIR -3 259 6 1930 209 58 2 chr20 23458000 23458416 -48695466 + L1MC1 LINE L1 232 670 -5756 9795 214 46 20 chr20 23458417 23459111 -48694771 + L1MC1 LINE L1 2042 2716 -3897 1968 43 0 0 chr20 23459111 23459345 -48694537 + L1PA3 LINE L1 5908 6141 -14 9795 214 46 20 chr20 23459345 23462720 -48691162 + L1MC1 LINE L1 2716 6241 -372 2364 128 31 0 chr20 23462720 23463073 -48690809 + THE1B LTR MaLR 1 364 0 9795 214 46 20 chr20 23463073 23463456 -48690426 + L1MC1 LINE L1 6241 6613 0 684 228 111 0 chr20 23463799 23463988 -48689894 - LTR16C LTR ERVL 0 491 282 2174 171 77 2 chr20 23464033 23464460 -48689422 - MER65C LTR ERV1 -2 459 1 281 356 81 0 chr20 23464617 23464777 -48689105 - L2 LINE L2 -208 3064 2892 1794 181 11 14 chr20 23465338 23465686 -48688196 + MLT1A1 LTR MaLR 19 365 0 699 202 87 63 chr20 23465710 23465963 -48687919 - L1MC4 LINE L1 -209 7833 7575 558 78 9 43 chr20 23465983 23466099 -48687783 + (TA)n Simple_repeat Simple_repeat 1 112 0 348 243 9 47 chr20 23466138 23466245 -48687637 + L1MC4 LINE L1 6601 6703 -1339 327 164 0 135 chr20 23466283 23466387 -48687495 + L1MC4 LINE L1 6614 6703 -1339 1384 224 31 0 chr20 23466392 23466718 -48687164 - L1MC4 LINE L1 -472 7570 7235 296 228 60 5 chr20 23466740 23466856 -48687026 - MIR SINE MIR -65 143 16 817 257 78 4 chr20 23467091 23467348 -48686534 + LTR16C LTR ERVL 213 488 -3 588 293 100 0 chr20 23467759 23467998 -48685884 - LTR16A1 LTR ERVL -2 455 193 1648 203 3 0 chr20 23468110 23468411 -48685471 + AluJo SINE Alu 1 302 -10 1162 202 39 83 chr20 23468450 23468880 -48685002 - MLT1B LTR MaLR 0 390 1 997 152 38 38 chr20 23470091 23470268 -48683614 - L1MA7 LINE L1 -7 6284 6105 1979 146 35 30 chr20 23470268 23470639 -48683243 - THE1C LTR MaLR -2 373 1 997 152 38 38 chr20 23470639 23470672 -48683210 - L1MA7 LINE L1 -185 6106 6074 1072 230 38 21 chr20 23471382 23471669 -48682213 + LTR16C LTR ERVL 200 491 0 374 292 220 21 chr20 23473630 23474058 -48679824 + L1ME LINE L1 4085 4597 -1549 284 279 71 32 chr20 23474168 23474322 -48679560 + L1ME LINE L1 5008 5167 -979 3521 117 41 6 chr20 23474871 23475403 -48678479 + MER41C LTR ERV1 1 551 -3 750 144 0 120 chr20 23475627 23475835 -48678047 - MER53 DNA DNA -4 185 3 550 194 14 36 chr20 23476381 23476520 -48677362 - LTR37B LTR ERV1 0 468 333 284 239 15 0 chr20 23476544 23476611 -48677271 - LTR37A LTR ERV1 -248 178 111 257 321 29 21 chr20 23476651 23476791 -48677091 - LTR37B LTR ERV1 -327 141 1 238 167 44 78 chr20 23476845 23476935 -48676947 + L1M2 LINE L1 5350 5436 -861 413 299 67 6 chr20 23476959 23477123 -48676759 + L1ME LINE L1 5502 5675 -446 981 270 95 55 chr20 23477149 23477898 -48675984 - L2 LINE L2 -4 3309 2540 1276 170 42 213 chr20 23477937 23478115 -48675767 - L1MA9 LINE L1 -55 6257 6050 4902 133 69 34 chr20 23478115 23478988 -48674894 + MER4D LTR ERV1 1 903 0 1276 170 42 213 chr20 23478988 23479273 -48674609 - L1MA9 LINE L1 -262 6050 5924 1952 136 3 63 chr20 23479273 23479604 -48674278 - AluJo SINE Alu -1 311 1 1276 170 42 213 chr20 23479604 23479783 -48674099 - L1MA9 LINE L1 -388 5924 5716 293 175 29 124 chr20 23479827 23479964 -48673918 - L2 LINE L2 -843 2471 2348 1723 248 144 12 chr20 23480098 23480667 -48673215 - LTR48B LTR ERV1 0 644 1 3076 187 164 19 chr20 23481350 23482087 -48671795 + MER21B LTR ERV1 1 844 -19 260 239 30 15 chr20 23482539 23482606 -48671276 - L1ME4a LINE L1 -100 6021 5954 1843 141 151 10 chr20 23482606 23483010 -48670872 - MER31B LTR ERV1 0 466 6 1655 231 76 9 chr20 23483301 23483720 -48670162 - MER39 LTR ERV1 -1 706 260 298 315 9 27 chr20 23483943 23484054 -48669828 + MIR3 SINE MIR 67 175 -33 747 282 99 12 chr20 23484911 23485414 -48668468 + L2 LINE L2 2544 3154 -159 387 266 172 0 chr20 23485609 23485737 -48668145 - MER5A DNA MER1_type 0 189 40 3011 188 28 6 chr20 23485737 23486273 -48667609 - LTR39 LTR ERV1 0 783 236 2768 99 46 17 chr20 23486274 23486690 -48667192 + MSTA LTR MaLR 1 428 0 1534 136 0 4 chr20 23486690 23486932 -48666950 + MSTA-int LTR MaLR 1 241 -1410 3607 148 33 42 chr20 23486935 23487610 -48666272 + LTR8 LTR ERV1 1 669 -22 1449 104 78 17 chr20 23487630 23487641 -48666241 - LTR39 LTR ERV1 -538 245 236 2291 152 56 10 chr20 23487641 23488050 -48665832 + MSTA LTR MaLR 1 428 0 1449 104 78 17 chr20 23488050 23488269 -48665613 - LTR39 LTR ERV1 -547 236 1 2210 138 0 0 chr20 23488335 23488647 -48665235 - AluSx SINE Alu 0 312 1 322 263 30 38 chr20 23488702 23488865 -48665017 - MER5A DNA MER1_type -23 166 1 447 19 0 0 chr20 23489262 23489314 -48664568 + (CA)n Simple_repeat Simple_repeat 2 53 0 1189 262 113 15 chr20 23489453 23489781 -48664101 + MLT1G1 LTR MaLR 73 432 -163 949 289 75 30 chr20 23489929 23490355 -48663527 - MLT1J2 LTR MaLR -5 445 1 281 257 27 0 chr20 23490355 23490429 -48663453 + MIR SINE MIR 113 188 -74 227 252 0 87 chr20 23490990 23491093 -48662789 + MIR SINE MIR 119 212 -50 613 248 0 8 chr20 23491125 23491258 -48662624 - AluJo SINE Alu -61 251 120 1940 141 17 10 chr20 23491279 23491578 -48662304 - AluSx SINE Alu -9 303 3 694 188 16 0 chr20 23491693 23491821 -48662061 - AluJo SINE Alu -172 130 1 524 323 109 30 chr20 23492083 23492523 -48661359 + L1ME4a LINE L1 5573 6047 -74 21 0 0 0 chr20 23492595 23492616 -48661266 + AT_rich Low_complexity Low_complexity 1 21 0 1530 212 21 9 chr20 23495426 23495756 -48658126 - L1ME1 LINE L1 -5 6161 5828 604 273 6 11 chr20 23496318 23496494 -48657388 - MER5B DNA MER1_type -1 177 3 543 283 58 55 chr20 23496800 23497287 -48656595 + HAL1 LINE L1 1180 1667 -840 371 297 29 51 chr20 23497419 23497594 -48656288 + L1M4 LINE L1 3663 3833 -2313 1075 215 146 57 chr20 23497652 23497884 -48655998 + L1M4 LINE L1 4596 4806 -1340 1792 115 0 4 chr20 23497884 23498159 -48655723 - AluY SINE Alu 0 312 39 1075 215 146 57 chr20 23498159 23498418 -48655464 + L1M4 LINE L1 4806 5132 -1014 6962 50 3 31 chr20 23498507 23499526 -48654356 - L1PA6 LINE L1 -3 6151 5120 324 250 14 71 chr20 23499615 23499755 -48654127 - L1M4 LINE L1 -2165 3981 3850 2019 76 90 14 chr20 23500057 23500357 -48653525 - AluY SINE Alu 0 311 1 24 32 0 0 chr20 23500590 23500621 -48653261 + AT_rich Low_complexity Low_complexity 1 31 0 18042 33 0 0 chr20 23500723 23503618 -48650264 - L1PA4 LINE L1 0 6155 3263 1802 177 0 25 chr20 23503618 23503935 -48649947 - AluJb SINE Alu -3 309 1 4412 159 58 14 chr20 23504734 23505074 -48648808 + MER6 DNA MER2_type 1 325 -540 628 42 21 21 chr20 23505074 23505170 -48648712 + (GAAA)n Simple_repeat Simple_repeat 1 96 0 4412 159 58 14 chr20 23505170 23505658 -48648224 + MER6 DNA MER2_type 325 865 0 2520 223 64 68 chr20 23506339 23508023 -48645859 + L1MDb LINE L1 783 2464 -3942 6307 55 0 5 chr20 23508025 23508795 -48645087 - L1PA8 LINE L1 0 6172 5407 2350 79 31 0 chr20 23508991 23509283 -48644599 + AluY SINE Alu 1 301 -10 619 253 80 22 chr20 23509866 23510092 -48643790 - MIR SINE MIR -15 247 5 738 173 64 17 chr20 23511500 23511673 -48642209 - MER5A DNA MER1_type -1 188 8 633 217 53 0 chr20 23511690 23511842 -48642040 + MER5B DNA MER1_type 19 178 0 357 280 207 0 chr20 23512058 23512208 -48641674 + MER5A DNA MER1_type 9 189 0 353 288 130 0 chr20 23512529 23512675 -48641207 + MER5B DNA MER1_type 1 165 -13 1599 170 39 20 chr20 23513090 23513396 -48640486 - AluJo SINE Alu 0 312 1 2597 66 0 0 chr20 23513405 23513710 -48640172 - AluY SINE Alu -6 305 1 683 232 16 22 chr20 23514351 23514536 -48639346 - MER5A DNA MER1_type -5 184 1 257 215 152 0 chr20 23514722 23514801 -48639081 - MER5C DNA MER1_type 0 324 234 2271 83 0 51 chr20 23514806 23515118 -48638764 + AluSq SINE Alu 1 296 -17 232 289 26 26 chr20 23515168 23515244 -48638638 - MER5C DNA MER1_type -240 84 9 515 233 50 74 chr20 23516270 23516517 -48637365 - MLT1G LTR MaLR 0 590 299 358 319 17 17 chr20 23516591 23516707 -48637175 - MER5B DNA MER1_type -55 123 8 259 311 14 0 chr20 23516743 23516817 -48637065 + MER5A DNA MER1_type 9 83 -106 1192 182 52 10 chr20 23517848 23518155 -48635727 + MER33 DNA MER1_type 5 324 0 231 337 87 0 chr20 23518195 23518287 -48635595 + MIR SINE MIR 84 183 -79 240 287 85 67 chr20 23519455 23519619 -48634263 - MIR3 SINE MIR -8 200 34 249 345 35 7 chr20 23520106 23520251 -48633631 + MLT1H LTR MaLR 24 172 -377 782 275 10 0 chr20 23520505 23520712 -48633170 + MER3 DNA MER1_type 1 209 0 477 323 70 5 chr20 23520809 23521010 -48632872 - MIR SINE MIR -21 241 28 638 241 74 0 chr20 23521520 23521682 -48632200 + L1MB7 LINE L1 5908 6081 -103 1510 278 75 38 chr20 23522460 23522726 -48631156 + MLT1G LTR MaLR 38 293 -297 2075 147 39 30 chr20 23522726 23523087 -48630795 + THE1B LTR MaLR 1 364 0 1510 278 75 38 chr20 23523087 23523353 -48630529 + MLT1G LTR MaLR 293 590 0 276 320 50 0 chr20 23523356 23523456 -48630426 - L2 LINE L2 -5 3308 3204 384 318 25 86 chr20 23523699 23524061 -48629821 + L2 LINE L2 2933 3272 0 538 169 0 0 chr20 23525193 23525276 -48628606 + MIR SINE MIR 47 129 -133 3209 78 7 2 chr20 23525284 23525706 -48628176 - L1PA10 LINE L1 -171 5997 5574 429 222 23 108 chr20 23525706 23525882 -48628000 - L2 LINE L2 -44 3269 3109 1900 258 34 21 chr20 23525896 23526430 -48627452 + MLT1H1 LTR MaLR 15 555 0 249 251 117 74 chr20 23528427 23528590 -48625292 - MER5A DNA MER1_type -19 170 1 764 243 125 46 chr20 23528728 23529008 -48624874 - LTR33A LTR ERVL 0 523 222 27 29 0 0 chr20 23529157 23529191 -48624691 + AT_rich Low_complexity Low_complexity 1 34 0 313 282 154 0 chr20 23529196 23529313 -48624569 - MER5B DNA MER1_type -38 140 6 223 241 13 101 chr20 23529349 23529428 -48624454 + L2 LINE L2 3242 3313 0 304 320 14 20 chr20 23529987 23530134 -48623748 + CT-rich Low_complexity Low_complexity 2 147 0 272 346 37 22 chr20 23530579 23530715 -48623167 - MER5B DNA MER1_type -3 175 38 359 233 166 36 chr20 23531801 23531994 -48621888 - LTR16C LTR ERVL -107 384 167 732 221 116 35 chr20 23532908 23533080 -48620802 + MER5A DNA MER1_type 4 189 0 200 347 0 10 chr20 23533281 23533379 -48620503 + A-rich Low_complexity Low_complexity 5 101 0 952 104 92 0 chr20 23533858 23534022 -48619860 - L1MA2 LINE L1 -104 6200 6022 303 256 35 23 chr20 23534165 23534251 -48619631 + L1MC4 LINE L1 6617 6703 -1339 207 104 62 0 chr20 23534256 23534304 -48619578 + (TA)n Simple_repeat Simple_repeat 1 51 0 320 263 29 40 chr20 23534306 23534476 -48619406 - L1MC4 LINE L1 -1338 6704 6593 356 280 52 83 chr20 23534690 23534883 -48618999 + MIR3 SINE MIR 15 201 -7 190 289 0 0 chr20 23534964 23535016 -48618866 - L2 LINE L2 0 3272 3221 392 274 142 67 chr20 23535922 23536309 -48617573 - MLT1H LTR MaLR -16 533 118 235 320 265 7 chr20 23537208 23537355 -48616527 - MIR SINE MIR -14 248 64 198 340 3 41 chr20 23538418 23538566 -48615316 + MIR SINE MIR 71 212 -50 366 108 0 81 chr20 23538580 23538654 -48615228 - AluJo SINE Alu 0 302 235 4457 135 29 3 chr20 23538655 23539342 -48614540 - MER50 LTR ERV1 -23 711 7 1397 181 4 0 chr20 23539342 23539585 -48614297 - AluJo SINE Alu -68 244 1 263 303 11 0 chr20 23539644 23539733 -48614149 - MIR SINE MIR 0 262 173 186 306 125 0 chr20 23540029 23540101 -48613781 - L2 LINE L2 -23 3290 3210 484 250 24 74 chr20 23540382 23540620 -48613262 + L1ME4a LINE L1 5610 5828 -293 2031 115 10 6 chr20 23540756 23541068 -48612814 - AluSq SINE Alu 0 313 1 281 216 0 78 chr20 23541201 23541303 -48612579 + CT-rich Low_complexity Low_complexity 3 96 0 1031 218 97 91 chr20 23542913 23543377 -48610505 + MLT1G1 LTR MaLR 126 592 -3 1048 208 112 4 chr20 23543913 23544154 -48609728 - LTR16C LTR ERVL -18 473 207 2304 165 93 116 chr20 23544361 23544473 -48609409 - LTR8A LTR ERV1 0 727 614 1840 153 24 0 chr20 23544473 23544767 -48609115 + AluJo SINE Alu 1 301 -11 2304 165 93 116 chr20 23544767 23545237 -48608645 - LTR8A LTR ERV1 -113 614 163 1469 156 3 109 chr20 23545237 23545576 -48608306 - AluJb SINE Alu -9 303 1 2304 165 93 116 chr20 23545576 23545736 -48608146 - LTR8A LTR ERV1 -564 163 1 1902 274 72 14 chr20 23545781 23546368 -48607514 - L2 LINE L2 -447 2867 2247 1956 120 92 90 chr20 23546372 23546805 -48607077 - LTR47A LTR ERVL -18 434 1 751 125 0 25 chr20 23548113 23548233 -48605649 + FLAM_C SINE Alu 27 143 0 43 20 0 0 chr20 23548236 23548286 -48605596 + AT_rich Low_complexity Low_complexity 1 50 0 259 276 75 16 chr20 23548335 23548464 -48605418 + MIR SINE MIR 3 149 -59 471 240 149 34 chr20 23548941 23549149 -48604733 - L2 LINE L2 -2 3311 3080 327 148 19 0 chr20 23549821 23549875 -48604007 + MLT1H LTR MaLR 458 512 -37 746 167 31 62 chr20 23549882 23550044 -48603838 - L1MA9 LINE L1 -37 6275 6119 276 216 0 0 chr20 23550044 23550095 -48603787 + MLT1H LTR MaLR 496 546 -3 287 284 43 17 chr20 23551485 23551601 -48602281 + MIR SINE MIR 124 242 -20 1388 248 108 0 chr20 23552052 23552460 -48601422 + LTR16C LTR ERVL 36 487 -4 2314 95 0 0 chr20 23554209 23554515 -48599367 - AluSc SINE Alu -3 306 1 375 23 0 0 chr20 23554586 23554630 -48599252 + (CA)n Simple_repeat Simple_repeat 2 45 0 270 284 21 53 chr20 23555575 23555670 -48598212 + MER58 DNA MER1_type 1 92 -249 885 121 0 23 chr20 23555691 23555823 -48598059 - FLAM_C SINE Alu -3 130 2 376 224 12 0 chr20 23555873 23555958 -48597924 + MER58 DNA MER1_type 2332 2417 -3 331 282 24 112 chr20 23556222 23556428 -48597454 + L1ME3 LINE L1 5750 5937 -225 210 171 0 0 chr20 23556447 23556488 -48597394 + (TG)n Simple_repeat Simple_repeat 1 41 0 221 279 0 16 chr20 23556559 23556620 -48597262 + GA-rich Low_complexity Low_complexity 3 62 0 1571 124 28 8 chr20 23556689 23556939 -48596943 + L1PA8 LINE L1 5918 6172 0 747 279 40 12 chr20 23557035 23557286 -48596596 + MIR SINE MIR 3 260 -2 606 250 57 10 chr20 23557653 23557845 -48596037 - L1ME1 LINE L1 -12 6154 5954 301 239 42 0 chr20 23558164 23558235 -48595647 - MIR3 SINE MIR -43 165 92 4225 242 100 39 chr20 23558652 23560340 -48593542 + L1MCc LINE L1 21 1606 -5335 297 118 0 0 chr20 23560340 23560391 -48593491 + (CA)n Simple_repeat Simple_repeat 2 52 0 4225 242 100 39 chr20 23560391 23561718 -48592164 + L1MCc LINE L1 1606 3450 -3491 1508 90 22 9 chr20 23561718 23561940 -48591942 + AluY SINE Alu 77 301 -10 4225 242 100 39 chr20 23561940 23562173 -48591709 + L1MCc LINE L1 3450 3667 -3274 320 338 6 25 chr20 23562184 23562341 -48591541 + GA-rich Low_complexity Low_complexity 4 157 0 505 256 103 31 chr20 23562905 23563100 -48590782 + LTR16C LTR ERVL 283 491 0 1967 139 3 19 chr20 23563245 23563562 -48590320 + AluSx SINE Alu 1 312 0 966 248 123 77 chr20 23564943 23565463 -48588419 + MLT1H1 LTR MaLR 12 555 0 206 333 191 12 chr20 23565600 23565762 -48588120 - MIR3 SINE MIR -16 192 2 250 225 70 31 chr20 23566140 23566269 -48587613 - L2 LINE L2 -212 3060 2927 278 241 146 50 chr20 23566509 23566817 -48587065 - MLT1H LTR MaLR 0 549 137 196 156 0 0 chr20 23567319 23567351 -48586531 - MER5A DNA MER1_type -115 74 43 181 267 0 67 chr20 23567320 23567380 -48586502 + MER5A DNA MER1_type 128 183 -6 * 274 254 0 0 chr20 23567375 23567434 -48586448 + MIR SINE MIR 22 80 -182 1198 210 29 0 chr20 23567435 23567673 -48586209 + MLT1E1 LTR MaLR 410 654 0 835 214 19 147 chr20 23567687 23568074 -48585808 - MLT1J LTR MaLR -98 413 42 740 170 9 0 chr20 23568079 23568191 -48585691 + FRAM SINE Alu 35 147 -29 17820 151 18 26 chr20 23568191 23571270 -48582612 - L1P3 LINE L1 -2149 4312 1214 186 43 0 0 chr20 23571270 23571293 -48582589 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 17820 151 18 26 chr20 23571293 23571516 -48582366 - L1P3 LINE L1 -5247 1214 991 1027 132 6 24 chr20 23571530 23571697 -48582185 - MLT1D-int LTR MaLR -1206 165 2 1425 190 161 67 chr20 23571697 23572133 -48581749 - MLT1D LTR MaLR -21 484 8 1230 176 13 25 chr20 23572140 23572378 -48581504 + L1MC3 LINE L1 6059 6293 -1492 * 4957 161 52 34 chr20 23572373 23572610 -48581272 + L1MC3 LINE L1 6745 6976 -809 1855 170 0 16 chr20 23572610 23572922 -48580960 + AluJo SINE Alu 1 307 -5 4957 161 52 34 chr20 23572922 23573707 -48580175 + L1MC3 LINE L1 6976 7785 0 1056 119 0 0 chr20 23573910 23574053 -48579829 + AluSg/x SINE Alu 143 285 -27 315 0 0 0 chr20 23574053 23574088 -48579794 + (CA)n Simple_repeat Simple_repeat 2 36 0 1351 97 0 0 chr20 23574282 23574457 -48579425 + AluSg/x SINE Alu 132 306 -4 183 164 49 131 chr20 23574508 23574569 -48579313 + L3 LINE CR1 1520 1575 -2 522 148 0 21 chr20 23575313 23575455 -48578427 + (TTTTTG)n Simple_repeat Simple_repeat 5 143 0 992 295 73 29 chr20 23578021 23578739 -48575143 + L2 LINE L2 2543 3308 -5 367 133 17 0 chr20 23579091 23579151 -48574731 - MER5A DNA MER1_type 0 189 129 3852 201 84 11 chr20 23579151 23580010 -48573872 - MER63C DNA MER1_type -8 922 1 484 301 32 0 chr20 23580015 23580138 -48573744 - MER5A DNA MER1_type -62 127 1 1025 190 66 22 chr20 23580680 23580906 -48572976 + MIR SINE MIR 14 249 -13 216 176 39 0 chr20 23580936 23580987 -48572895 + (TTTAA)n Simple_repeat Simple_repeat 5 57 0 736 203 16 0 chr20 23581142 23581270 -48572612 - FLAM_A SINE Alu -2 131 2 227 313 60 0 chr20 23582828 23582911 -48570971 + MIR3 SINE MIR 117 204 -4 34 79 0 0 chr20 23583167 23583243 -48570639 + AT_rich Low_complexity Low_complexity 1 76 0 31519 22 0 0 chr20 23583258 23587682 -48566200 + L1HS LINE L1 1731 6153 -2 41 72 0 0 chr20 23587683 23587766 -48566116 + AT_rich Low_complexity Low_complexity 1 83 0 21 36 0 0 chr20 23587776 23587804 -48566078 + AT_rich Low_complexity Low_complexity 1 28 0 1829 189 56 14 chr20 23587902 23588257 -48565625 + MLT1A2 LTR MaLR 1 370 -4 865 231 102 9 chr20 23588348 23588573 -48565309 - MIR SINE MIR 0 262 17 248 316 13 0 chr20 23590225 23590304 -48563578 + (TG)n Simple_repeat Simple_repeat 1 80 0 652 240 148 20 chr20 23591522 23591663 -48562219 + MLT1F LTR MaLR 43 165 -377 330 26 0 0 chr20 23591663 23591702 -48562180 + (TC)n Simple_repeat Simple_repeat 2 40 0 652 240 148 20 chr20 23591702 23591957 -48561925 + MLT1F LTR MaLR 165 542 0 396 290 59 25 chr20 23592274 23592512 -48561370 - L1ME4a LINE L1 -239 5882 5637 347 301 87 82 chr20 23592728 23593117 -48560765 - L1ME4a LINE L1 -1739 4407 4017 254 203 57 138 chr20 23593338 23593461 -48560421 - MLT1K LTR MaLR -286 302 190 1127 170 5 5 chr20 23593522 23593722 -48560160 + L1PB1 LINE L1 1 200 -6663 6986 108 44 3 chr20 23593724 23595331 -48558551 + L1PB1 LINE L1 636 2427 -4436 31513 111 7 22 chr20 23595337 23601805 -48552077 + L1PA7 LINE L1 8 6469 0 14955 165 29 18 chr20 23601801 23604678 -48549204 + L1PB1 LINE L1 2411 5255 -1612 * 2019 119 7 7 chr20 23604678 23604963 -48548919 + AluSg SINE Alu 1 285 -25 207 0 0 0 chr20 23604963 23604986 -48548896 + (CA)n Simple_repeat Simple_repeat 2 24 0 14955 165 29 18 chr20 23604986 23606506 -48547376 + L1PB1 LINE L1 5254 6865 -2 194 260 78 39 chr20 23606878 23606955 -48546927 + L3 LINE CR1 926 1005 -572 4570 39 2 0 chr20 23607898 23608411 -48545471 + L1PA5 LINE L1 5636 6149 -5 238 287 156 54 chr20 23608734 23608901 -48544981 - MIR3 SINE MIR -5 203 20 21 36 0 0 chr20 23609893 23609921 -48543961 + AT_rich Low_complexity Low_complexity 1 28 0 2489 53 0 20 chr20 23610606 23610906 -48542976 - AluY SINE Alu -17 294 1 596 317 60 25 chr20 23611905 23612337 -48541545 + L1ME LINE L1 5262 5708 -413 1068 248 17 4 chr20 23612418 23612656 -48541226 + MIR SINE MIR 12 252 -10 2082 254 31 5 chr20 23612774 23613348 -48540534 + L1ME1 LINE L1 3575 4163 -1983 1460 231 48 13 chr20 23613349 23613722 -48540160 + L1ME1 LINE L1 5674 6059 -107 246 320 8 11 chr20 23614465 23614589 -48539293 + MIR3 SINE MIR 37 197 -11 573 204 0 0 chr20 23615009 23615112 -48538770 + L1MD2 LINE L1 6036 6138 -221 303 49 0 0 chr20 23615115 23615156 -48538726 + (CA)n Simple_repeat Simple_repeat 1 41 0 3245 163 101 12 chr20 23615166 23615812 -48538070 + MER44D DNA MER2_type 1 703 -2 631 201 65 0 chr20 23615814 23615953 -48537929 + L1MD2 LINE L1 6156 6303 -56 2134 113 3 0 chr20 23615971 23616253 -48537629 - AluSq SINE Alu -30 283 1 272 149 90 45 chr20 23616253 23616320 -48537562 + L1MD2 LINE L1 6289 6358 -1 817 93 16 0 chr20 23616418 23616547 -48537335 + (GGAA)n Simple_repeat Simple_repeat 1 131 0 3253 263 62 44 chr20 23616672 23618036 -48535846 + HAL1 LINE L1 577 1964 -543 1048 155 12 0 chr20 23618041 23618202 -48535680 + FRAM SINE Alu 1 162 -14 672 225 6 55 chr20 23618378 23618560 -48535322 + MER5B DNA MER1_type 4 176 -2 344 255 40 13 chr20 23619469 23619618 -48534264 - L1MC/D LINE L1 -2342 5466 5314 333 282 74 15 chr20 23619912 23620114 -48533768 - LTR33 LTR ERVL -11 510 297 209 358 12 0 chr20 23620298 23620379 -48533503 + MIR SINE MIR 59 140 -122 241 159 0 0 chr20 23620986 23621030 -48532852 + MADE1 DNA Mariner 37 80 0 284 290 213 41 chr20 23621178 23621568 -48532314 - L2 LINE L2 -17 3296 2840 244 258 0 30 chr20 23621792 23621858 -48532024 + (TATG)n Simple_repeat Simple_repeat 1 64 0 1289 258 34 59 chr20 23621929 23622521 -48531361 + MLT1G1 LTR MaLR 15 591 -4 208 125 0 0 chr20 23622540 23622572 -48531310 + (CATA)n Simple_repeat Simple_repeat 3 34 0 185 136 0 45 chr20 23622573 23622617 -48531265 + (TATATG)n Simple_repeat Simple_repeat 6 47 0 1266 162 31 31 chr20 23622625 23622854 -48531028 - AluJo SINE Alu 0 312 84 229 271 35 35 chr20 23623209 23623294 -48530588 + MIR SINE MIR 178 262 0 267 202 32 0 chr20 23623604 23623698 -48530184 + GA-rich Low_complexity Low_complexity 4 100 0 229 382 18 18 chr20 23623870 23623980 -48529902 + MIR SINE MIR 21 130 -132 216 200 40 53 chr20 23624377 23624452 -48529430 + GA-rich Low_complexity Low_complexity 2 75 0 199 0 65 0 chr20 23625296 23625327 -48528555 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 357 294 87 104 chr20 23626214 23626365 -48527517 + L1MB4 LINE L1 485 637 -6212 213 39 0 0 chr20 23626365 23626391 -48527491 + (CGG)n Simple_repeat Simple_repeat 1 26 0 357 294 87 104 chr20 23626391 23626756 -48527126 + L1MB4 LINE L1 637 1016 -5833 319 295 92 92 chr20 23626717 23627209 -48526673 - L1M2 LINE L1 -5706 1143 652 * 2393 104 0 0 chr20 23630378 23630686 -48523196 + AluSx SINE Alu 1 308 -4 540 264 66 31 chr20 23630690 23631001 -48522881 - L1ME3 LINE L1 -8 6154 5813 239 282 161 24 chr20 23631463 23631587 -48522295 + MER5A DNA MER1_type 49 189 0 29 28 0 0 chr20 23632372 23632408 -48521474 + AT_rich Low_complexity Low_complexity 1 36 0 207 263 182 20 chr20 23632628 23632727 -48521155 + MIR SINE MIR 26 140 -122 305 189 0 122 chr20 23633477 23633567 -48520315 + MER5A DNA MER1_type 4 82 -107 1754 147 0 0 chr20 23634229 23634480 -48519402 - AluSx SINE Alu -15 297 47 567 278 15 0 chr20 23634498 23634696 -48519186 - L1MD3 LINE L1 -10 7985 7785 * 879 225 237 6 chr20 23634692 23635034 -48518848 - L1MC4a LINE L1 -289 7519 7099 763 153 73 0 chr20 23635171 23635295 -48518587 - FLAM_C SINE Alu -10 133 1 2406 241 71 30 chr20 23635306 23635520 -48518362 + L1MB4 LINE L1 1174 1378 -5472 981 54 8 0 chr20 23635520 23635650 -48518232 - L1PB1 LINE L1 0 6151 6021 2406 241 71 30 chr20 23635650 23636365 -48517517 + L1MB4 LINE L1 1378 2141 -4709 1577 240 32 40 chr20 23636390 23636919 -48516963 + L1MA9 LINE L1 5750 6274 -38 2272 252 40 43 chr20 23636938 23637709 -48516173 + L1MB4 LINE L1 2336 3060 -3788 2818 10 0 0 chr20 23637709 23638016 -48515866 + AluYb8 SINE Alu 1 307 -11 2272 252 40 43 chr20 23638016 23638655 -48515227 + L1MB4 LINE L1 3060 3699 -3149 * 8645 201 38 29 chr20 23638654 23641390 -48512492 + L1PA16 LINE L1 2700 5479 -687 2102 128 7 3 chr20 23641390 23641694 -48512188 + AluSc SINE Alu 1 305 -4 8645 201 38 29 chr20 23641694 23642369 -48511513 + L1PA16 LINE L1 5479 6146 -20 930 286 12 20 chr20 23642441 23642696 -48511186 + MIR SINE MIR 10 262 0 271 272 143 58 chr20 23643094 23643318 -48510564 + L1ME LINE L1 5536 5778 -343 1362 194 23 23 chr20 23643331 23643641 -48510241 + MLT1A1 LTR MaLR 1 310 -55 189 0 0 0 chr20 23643641 23643662 -48510220 + (TAAA)n Simple_repeat Simple_repeat 4 24 0 2495 241 69 9 chr20 23643804 23644757 -48509125 + L1MB4 LINE L1 3685 4694 -2154 661 237 120 4 chr20 23644757 23645031 -48508851 + L1MB4 LINE L1 5058 5363 -1485 8286 217 53 21 chr20 23645032 23645837 -48508045 + L1MC1 LINE L1 21 799 -5627 261 0 0 0 chr20 23645837 23645866 -48508016 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 8286 217 53 21 chr20 23645866 23649530 -48504352 + L1MC1 LINE L1 799 4344 -2082 2807 13 0 0 chr20 23649530 23649837 -48504045 + AluY SINE Alu 1 307 -4 8286 217 53 21 chr20 23649837 23650020 -48503862 + L1MC1 LINE L1 4344 4520 -1906 2223 133 11 24 chr20 23650020 23650389 -48503493 - THE1B LTR MaLR 0 364 1 8286 217 53 21 chr20 23650389 23650440 -48503442 + L1MC1 LINE L1 4520 4568 -1858 7649 56 2 2 chr20 23650440 23652192 -48501690 + L1PA6 LINE L1 4396 6149 -5 8286 217 53 21 chr20 23652192 23652570 -48501312 + L1MC1 LINE L1 4568 5357 -1069 777 200 89 0 chr20 23652798 23652988 -48500894 + L1MC1 LINE L1 5369 5575 -851 1371 172 0 38 chr20 23652988 23653250 -48500632 + AluJb SINE Alu 56 307 -5 3156 151 24 7 chr20 23653251 23653848 -48500034 + L1MC1 LINE L1 5582 6188 -425 5433 73 5 5 chr20 23654085 23654457 -48499425 - L1PB1 LINE L1 0 6151 5780 189 0 0 0 chr20 23654457 23654478 -48499404 + (TA)n Simple_repeat Simple_repeat 2 22 0 5433 73 5 5 chr20 23654478 23654869 -48499013 - L1PB1 LINE L1 -370 5781 5388 1421 197 41 3 chr20 23654899 23655214 -48498668 + L1MC1 LINE L1 6261 6587 -26 2593 225 81 10 chr20 23655263 23656688 -48497194 + L1MB4 LINE L1 5348 6882 0 419 250 7 4 chr20 23656722 23656863 -48497019 + MIR SINE MIR 69 260 -2 1708 162 84 6 chr20 23656863 23657197 -48496685 - MER46B DNA MER2_type 0 236 2 837 175 81 3 chr20 23659780 23660065 -48493817 + MLT1B LTR MaLR 1 390 0 794 235 92 49 chr20 23660362 23660690 -48493192 - MER2 DNA MER2_type -1 343 2 2661 238 62 25 chr20 23661401 23662234 -48491648 - L1MCa LINE L1 -3181 3383 2582 2968 168 0 2 chr20 23662234 23662721 -48491161 - MER66B LTR ERV1 0 486 1 2661 238 62 25 chr20 23662721 23663493 -48490389 - L1MCa LINE L1 -3982 2582 1840 2115 146 0 0 chr20 23663493 23663801 -48490081 + AluSx SINE Alu 1 308 -4 2661 238 62 25 chr20 23663801 23663846 -48490036 - L1MCa LINE L1 -4724 1840 1798 207 69 0 0 chr20 23663846 23663875 -48490007 + (TTTA)n Simple_repeat Simple_repeat 4 32 0 2661 238 62 25 chr20 23663875 23664324 -48489558 - L1MCa LINE L1 -4766 1798 1065 329 114 71 29 chr20 23664328 23664398 -48489484 - L1MA9 LINE L1 0 6312 6240 410 196 0 0 chr20 23664410 23664507 -48489375 - L1MA8 LINE L1 -3 6288 6192 284 180 0 0 chr20 23664515 23664565 -48489317 + Tigger1 DNA MER2_type 1 50 -2368 8400 140 26 1 chr20 23664568 23666004 -48487878 + Tigger1 DNA MER2_type 946 2418 0 1993 251 76 40 chr20 23666004 23666951 -48486931 - L1MCa LINE L1 -4976 1069 112 2387 46 0 7 chr20 23666951 23667277 -48486605 - AluY SINE Alu 0 324 1 1993 251 76 40 chr20 23667277 23667347 -48486535 - L1MCa LINE L1 -5933 112 46 375 271 95 65 chr20 23667745 23668070 -48485812 - MLT1H LTR MaLR -120 429 95 2137 156 32 0 chr20 23668233 23668611 -48485271 - MLT1B LTR MaLR 0 390 1 290 309 24 8 chr20 23669188 23669311 -48484571 + T-rich Low_complexity Low_complexity 4 128 0 357 348 119 10 chr20 23669663 23669864 -48484018 + L1MEd LINE L1 126 348 -5771 295 275 50 122 chr20 23669947 23670305 -48483577 + L1MEd LINE L1 435 724 -5395 225 0 0 0 chr20 23670305 23670330 -48483552 + (CAA)n Simple_repeat Simple_repeat 3 27 0 295 275 50 122 chr20 23670330 23670644 -48483238 + L1MEd LINE L1 724 1059 -5060 1710 243 35 22 chr20 23670758 23671446 -48482436 + L1MEd LINE L1 2518 3214 -2915 37587 77 5 8 chr20 23671447 23677618 -48476264 + L1PA5 LINE L1 4 6151 -3 5485 233 63 32 chr20 23677619 23679572 -48474310 + L1MEd LINE L1 3196 5209 -920 1974 93 93 0 chr20 23679732 23680002 -48473880 + AluSq SINE Alu 1 295 -18 415 264 111 43 chr20 23680226 23680461 -48473421 + L1ME3A LINE L1 2227 2477 -3669 329 270 102 102 chr20 23680800 23681593 -48472289 + L1ME3A LINE L1 3065 3857 -2289 278 277 80 11 chr20 23681764 23681952 -48471930 + L1ME3A LINE L1 5149 5349 -797 1340 231 55 14 chr20 23681966 23682312 -48471570 + MLT1A1 LTR MaLR 6 365 0 318 223 27 38 chr20 23682323 23682507 -48471375 + L1ME3A LINE L1 5365 5586 -576 7163 117 42 11 chr20 23682547 23683741 -48470141 + Tigger3b DNA MER2_type 1 1231 0 244 270 71 68 chr20 23683846 23684056 -48469826 + L1ME3A LINE L1 5688 5901 -269 1916 98 34 142 chr20 23684056 23684464 -48469418 + THE1B LTR MaLR 1 364 0 244 270 71 68 chr20 23684464 23684505 -48469377 + L1ME3A LINE L1 5901 5940 -230 345 301 49 38 chr20 23685130 23685313 -48468569 + LTR33A LTR ERVL 68 252 -271 442 224 82 54 chr20 23685524 23685671 -48468211 + MIR SINE MIR 20 170 -92 9134 227 53 59 chr20 23685686 23689367 -48464515 - L1MC2 LINE L1 -427 6197 2496 1504 215 6 13 chr20 23689367 23689679 -48464203 - AluJo SINE Alu -2 310 1 9134 227 53 59 chr20 23689679 23691352 -48462530 - L1MC2 LINE L1 -4128 2496 886 2389 41 6 41 chr20 23691352 23691668 -48462214 + AluY SINE Alu 1 305 -6 9134 227 53 59 chr20 23691668 23692531 -48461351 - L1MC2 LINE L1 -5738 886 19 22 0 0 0 chr20 23692780 23692802 -48461080 + AT_rich Low_complexity Low_complexity 1 22 0 381 294 106 12 chr20 23692815 23692975 -48460907 - MIR SINE MIR -86 176 2 259 328 143 0 chr20 23693396 23693515 -48460367 + MIR SINE MIR 91 226 -36 371 286 34 42 chr20 23693683 23693802 -48460080 - L2 LINE L2 -1 3271 3154 1911 179 79 28 chr20 23693965 23694434 -48459448 - MLT1D LTR MaLR -7 498 6 229 118 118 32 chr20 23695120 23695213 -48458669 + (TTAAA)n Simple_repeat Simple_repeat 3 103 0 1420 218 104 14 chr20 23695263 23695685 -48458197 - MLT1C LTR MaLR -2 465 6 1402 243 197 10 chr20 23696760 23697369 -48456513 - LTR50 LTR ERVL -53 742 20 1837 154 40 27 chr20 23698510 23698880 -48455002 + THE1C LTR MaLR 1 375 0 10284 102 48 14 chr20 23698880 23700407 -48453475 + THE1C-int LTR MaLR 1 1580 0 1945 151 19 24 chr20 23700407 23700784 -48453098 + THE1C LTR MaLR 1 375 0 1921 158 3 7 chr20 23701931 23702222 -48451660 - AluSx SINE Alu -22 290 1 461 288 74 54 chr20 23702277 23702453 -48451429 + MIR SINE MIR 1 179 -29 1438 199 56 58 chr20 23703198 23703750 -48450132 + L1MC5 LINE L1 7171 7721 -240 1809 216 64 28 chr20 23703776 23704071 -48449811 + MER77 LTR ERV1 54 378 -227 1290 232 46 25 chr20 23704071 23704437 -48449445 - MLT1A2 LTR MaLR 0 374 1 1809 216 64 28 chr20 23704437 23704669 -48449213 + MER77 LTR ERV1 378 600 -5 1408 209 82 24 chr20 23706408 23706824 -48447058 + L1ME2 LINE L1 5661 6100 -64 761 89 0 0 chr20 23706858 23706959 -48446923 + AluSg/x SINE Alu 177 277 -35 198 0 0 0 chr20 23706978 23707000 -48446882 + (TA)n Simple_repeat Simple_repeat 2 23 0 201 196 0 0 chr20 23707459 23707505 -48446377 + GA-rich Low_complexity Low_complexity 2 47 0 272 27 27 0 chr20 23707711 23707748 -48446134 + (CA)n Simple_repeat Simple_repeat 1 38 0 181 295 39 51 chr20 23708066 23708144 -48445738 + L3b LINE CR1 1393 1469 -114 350 206 78 29 chr20 23709384 23709486 -48444396 + L1MD3 LINE L1 7869 7975 -20 * 1121 232 88 18 chr20 23709485 23709869 -48444013 + L1MA9 LINE L1 7 417 -6613 6823 186 27 10 chr20 23709902 23711454 -48442428 + L1MA9 LINE L1 3835 5413 -1693 4486 166 13 13 chr20 23711873 23713147 -48440735 + L1MA9 LINE L1 5431 6711 -561 673 185 37 0 chr20 23713144 23713279 -48440603 + L1M3e LINE L1 108 247 -6783 * 302 169 15 0 chr20 23713336 23713401 -48440481 + (TA)n Simple_repeat Simple_repeat 1 66 0 243 0 0 0 chr20 23713400 23713427 -48440455 + (CA)n Simple_repeat Simple_repeat 2 28 0 * 2821 151 31 6 chr20 23713427 23713945 -48439937 + L1MA9 LINE L1 6742 7272 0 1570 157 12 104 chr20 23713987 23714389 -48439493 + MLT1A1 LTR MaLR 1 365 0 22 0 0 0 chr20 23714546 23714568 -48439314 + GC_rich Low_complexity Low_complexity 1 22 0 201 162 0 0 chr20 23714588 23714625 -48439257 + L2 LINE L2 3219 3255 -17 1871 68 20 4 chr20 23715055 23715305 -48438577 + AluSx SINE Alu 36 289 -23 216 0 0 0 chr20 23715305 23715329 -48438553 + (CA)n Simple_repeat Simple_repeat 2 25 0 2168 58 0 0 chr20 23715364 23715623 -48438259 + AluY SINE Alu 45 303 -8 22 56 0 0 chr20 23715775 23715811 -48438071 + AT_rich Low_complexity Low_complexity 1 36 0 563 122 0 47 chr20 23715980 23716087 -48437795 + L1PA13 LINE L1 6058 6159 -4 347 297 65 61 chr20 23716325 23716554 -48437328 - MLT1J LTR MaLR -55 456 227 1070 58 32 32 chr20 23717040 23717318 -48436564 + (TAGA)n Simple_repeat Simple_repeat 1 278 0 223 376 40 7 chr20 23717319 23717468 -48436414 - MIR SINE MIR -4 258 105 800 299 106 23 chr20 23718936 23719334 -48434548 + LTR16C LTR ERVL 2 432 -59 431 303 102 15 chr20 23719560 23719920 -48433962 - L1ME4a LINE L1 -3 6118 5725 6148 16 0 1 chr20 23720127 23720816 -48433066 + L1PA2 LINE L1 5468 6155 0 244 171 11 11 chr20 23721091 23721179 -48432703 + (TA)n Simple_repeat Simple_repeat 1 88 0 823 157 0 0 chr20 23721188 23721303 -48432579 - AluJb SINE Alu -197 115 1 2242 102 0 58 chr20 23722457 23722782 -48431100 + AluSx SINE Alu 1 306 -6 1570 122 30 134 chr20 23723792 23724194 -48429688 - THE1B LTR MaLR -4 360 1 304 340 65 28 chr20 23724860 23725151 -48428731 + L2 LINE L2 3008 3309 -4 1555 235 83 24 chr20 23725289 23725757 -48428125 - MLT1G LTR MaLR 0 590 95 1858 222 36 67 chr20 23725871 23726367 -48427515 + MLT1E2 LTR MaLR 137 617 -9 437 151 0 47 chr20 23726391 23726477 -48427405 - MLT1G LTR MaLR -473 82 1 965 169 87 0 chr20 23727082 23727266 -48426616 + MER3 DNA MER1_type 2 201 -8 953 157 25 91 chr20 23729295 23729537 -48424345 + MER96B DNA MER1_type? 192 417 0 2332 97 0 7 chr20 23729641 23729939 -48423943 + AluSc SINE Alu 1 296 -13 243 300 107 9 chr20 23730055 23730288 -48423594 + L1MDa LINE L1 1846 2101 -4439 225 265 39 0 chr20 23730672 23730774 -48423108 + L1ME LINE L1 5791 5896 -274 24 67 0 0 chr20 23731156 23731201 -48422681 + AT_rich Low_complexity Low_complexity 1 45 0 509 279 56 6 chr20 23732145 23732324 -48421558 - MIR SINE MIR -60 202 15 239 275 58 43 chr20 23732564 23732702 -48421180 + MIR SINE MIR 52 191 -71 912 203 104 111 chr20 23733685 23734090 -48419792 - L1MEc LINE L1 -5958 438 37 2749 208 107 7 chr20 23734090 23734764 -48419118 + MER63C DNA MER1_type 190 930 0 319 328 188 16 chr20 23734984 23735176 -48418706 + MIR SINE MIR 2 226 -36 720 220 145 16 chr20 23735400 23735586 -48418296 - MER63A DNA MER1_type 0 210 1 761 262 56 97 chr20 23736162 23736605 -48417277 + MLT1H LTR MaLR 12 436 -113 738 197 8 0 chr20 23737180 23737307 -48416575 - MER82 DNA MER2_type -524 129 2 305 24 24 0 chr20 23737308 23737350 -48416532 + (TG)n Simple_repeat Simple_repeat 2 44 0 214 308 108 31 chr20 23737554 23737684 -48416198 - L2 LINE L2 -14 3258 3119 218 238 63 0 chr20 23737769 23737832 -48416050 + MIR SINE MIR 66 132 -76 280 174 0 72 chr20 23737843 23737912 -48415970 - L2 LINE L2 0 3272 3209 885 176 136 0 chr20 23738536 23738712 -48415170 - MER20 DNA MER1_type -18 201 2 417 286 135 5 chr20 23739249 23739441 -48414441 + MIR SINE MIR 20 236 -26 423 303 109 76 chr20 23740820 23741295 -48412587 + LTR67 LTR ERVL 55 545 -12 327 160 32 0 chr20 23741637 23741731 -48412151 + CT-rich Low_complexity Low_complexity 1 97 0 367 263 60 15 chr20 23741837 23741970 -48411912 + LTR33A LTR ERVL 382 520 -3 198 236 0 0 chr20 23742388 23742443 -48411439 + (CATA)n Simple_repeat Simple_repeat 2 56 0 437 158 33 0 chr20 23742529 23742649 -48411233 + (CTATA)n Simple_repeat Simple_repeat 2 125 0 195 220 0 0 chr20 23742670 23742720 -48411162 + (CATATA)n Simple_repeat Simple_repeat 4 53 0 308 323 21 0 chr20 23742721 23742814 -48411068 + L1MC4 LINE L1 6615 6709 -1333 228 219 37 0 chr20 23742832 23742914 -48410968 + (TA)n Simple_repeat Simple_repeat 1 85 0 477 278 35 0 chr20 23743512 23743656 -48410226 - LTR16C LTR ERVL -32 459 311 1353 206 32 83 chr20 23744206 23744637 -48409245 + MER63B DNA MER1_type 20 428 -8 2234 113 3 0 chr20 23745598 23745890 -48407992 - AluSx SINE Alu -19 293 1 443 222 40 8 chr20 23745929 23746055 -48407827 + MER5B DNA MER1_type 47 176 -2 2252 89 0 14 chr20 23746167 23746458 -48407424 + AluSq SINE Alu 11 297 -16 371 273 123 79 chr20 23747163 23747197 -48406685 - LTR16C LTR ERVL -38 453 422 2346 125 30 22 chr20 23747197 23747558 -48406324 - THE1B LTR MaLR 0 364 1 371 273 123 79 chr20 23747558 23747889 -48405993 - LTR16C LTR ERVL -69 422 72 6265 18 0 0 chr20 23749796 23750511 -48403371 - L1PA2 LINE L1 -904 5242 4528 7858 12 10 0 chr20 23750511 23751395 -48402487 + L1PA2 LINE L1 5262 6155 0 325 258 11 0 chr20 23751584 23751677 -48402205 - MIR SINE MIR -68 194 101 2114 100 0 31 chr20 23752083 23752400 -48401482 + AluSq SINE Alu 1 308 0 2430 74 7 0 chr20 23752882 23753179 -48400703 - AluY SINE Alu -12 299 1 909 207 6 0 chr20 23753536 23753700 -48400182 - FRAM SINE Alu -13 163 1 3187 56 0 2 chr20 23753705 23754101 -48399781 - L1PA7 LINE L1 -6 6148 5754 496 219 38 38 chr20 23754269 23754429 -48399453 - L2 LINE L2 -1 3312 3153 454 163 12 0 chr20 23754472 23754558 -48399324 - MIR SINE MIR -95 167 81 19728 91 25 3 chr20 23754597 23757244 -48396638 - Charlie3 DNA MER1_type -4 2706 1 1182 266 114 50 chr20 23757267 23758020 -48395862 - L2 LINE L2 -158 3155 2338 2061 179 8 16 chr20 23758020 23758177 -48395705 + MLT1A1 LTR MaLR 1 158 -207 2838 0 0 10 chr20 23758177 23758481 -48395401 + AluYa5 SINE Alu 1 301 -10 2061 179 8 16 chr20 23758481 23758691 -48395191 + MLT1A1 LTR MaLR 158 365 0 1182 266 114 50 chr20 23758691 23758786 -48395096 - L2 LINE L2 -975 2338 2251 28 61 0 0 chr20 23759830 23759879 -48394003 + AT_rich Low_complexity Low_complexity 1 49 0 793 261 153 68 chr20 23759985 23760179 -48393703 + L2 LINE L2 1917 2093 -1220 1521 198 40 17 chr20 23760179 23760532 -48393350 - MLT1A1 LTR MaLR 0 365 5 793 261 153 68 chr20 23760532 23760883 -48392999 + L2 LINE L2 2093 2413 -900 378 0 0 0 chr20 23760883 23760925 -48392957 + (CA)n Simple_repeat Simple_repeat 1 42 0 793 261 153 68 chr20 23760925 23761676 -48392206 + L2 LINE L2 2413 3307 -6 2484 231 100 19 chr20 23761766 23762374 -48391508 + MER97a DNA MER1_type? 89 767 -127 2375 76 3 0 chr20 23762374 23762664 -48391218 + AluY SINE Alu 1 291 -20 2484 231 100 19 chr20 23762664 23762788 -48391094 + MER97a DNA MER1_type? 767 880 -14 431 233 16 23 chr20 23762798 23762927 -48390955 - MIR SINE MIR -93 169 42 379 202 67 11 chr20 23763105 23763194 -48390688 + L1ME3 LINE L1 5615 5708 -454 807 250 45 5 chr20 23763196 23763456 -48390426 + L1ME3 LINE L1 5881 6163 -7 299 257 14 0 chr20 23765604 23765678 -48388204 + L2 LINE L2 3234 3308 -5 235 105 0 0 chr20 23765754 23765799 -48388083 - HSMAR1 DNA Mariner -35 45 1 274 250 15 0 chr20 23766811 23766879 -48387003 - MLT1L LTR MaLR -545 70 2 354 215 43 11 chr20 23767096 23767189 -48386693 - MLT1L LTR MaLR -325 290 195 213 303 51 67 chr20 23768088 23768266 -48385616 - MIR SINE MIR -68 194 20 1728 295 81 5 chr20 23768796 23769399 -48384483 + ERVL LTR ERVL 4320 4968 -796 1022 277 69 35 chr20 23769555 23769591 -48384291 + LTR33 LTR ERVL 8 41 -480 1676 178 38 44 chr20 23769591 23769800 -48384082 - MLT1A1 LTR MaLR -2 363 155 2243 108 10 3 chr20 23769800 23770107 -48383775 - AluSc SINE Alu 0 309 1 1676 178 38 44 chr20 23770107 23770262 -48383620 - MLT1A1 LTR MaLR -210 155 1 1022 277 69 35 chr20 23770262 23770687 -48383195 + LTR33 LTR ERVL 41 485 -36 1626 198 73 23 chr20 23770860 23771214 -48382668 + MLT1A2 LTR MaLR 3 374 0 1384 186 110 52 chr20 23772154 23772499 -48381383 - MLT1A1 LTR MaLR 0 365 1 1807 185 70 0 chr20 23772570 23772884 -48380998 - MER1B DNA MER1_type -2 337 2 2373 113 29 69 chr20 23772986 23773365 -48380517 - THE1B LTR MaLR 0 364 1 12047 106 10 5 chr20 23773365 23774935 -48378947 - THE1B-int LTR MaLR 0 1580 3 1706 147 107 21 chr20 23774935 23775262 -48378620 - THE1B LTR MaLR -9 355 1 3085 156 80 12 chr20 23776058 23776636 -48377246 - L1MC2 LINE L1 -203 6141 5525 15229 148 53 11 chr20 23776648 23778402 -48375480 - L1PB1 LINE L1 0 6867 5188 207 0 0 0 chr20 23778402 23778425 -48375457 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 15229 148 53 11 chr20 23778425 23782650 -48371232 - L1PB1 LINE L1 -1679 5188 636 1175 151 5 0 chr20 23782658 23782850 -48371032 - L1PB1 LINE L1 -6668 195 3 3445 189 13 99 chr20 23782862 23784102 -48369780 - L1MC2 LINE L1 -743 5403 4381 222 91 30 0 chr20 23784942 23784975 -48368907 - MER5A DNA MER1_type 0 189 156 1384 115 0 0 chr20 23784985 23785176 -48368706 - AluY SINE Alu 0 311 121 955 81 40 0 chr20 23785215 23785339 -48368543 - AluY SINE Alu -182 129 1 579 222 104 0 chr20 23785344 23785479 -48368403 - MER5A DNA MER1_type -40 149 1 313 342 194 10 chr20 23786227 23786423 -48367459 - MIR SINE MIR -30 232 1 1418 263 79 25 chr20 23786584 23787101 -48366781 + MER90 LTR ERV1 31 575 0 2027 225 99 26 chr20 23788559 23789164 -48364718 - L1ME3A LINE L1 0 6170 5522 209 265 20 0 chr20 23789190 23789239 -48364643 + GA-rich Low_complexity Low_complexity 1 50 0 21 82 0 0 chr20 23790320 23790369 -48363513 + AT_rich Low_complexity Low_complexity 1 49 0 24 0 0 0 chr20 23790566 23790590 -48363292 + AT_rich Low_complexity Low_complexity 1 24 0 1880 147 3 29 chr20 23790592 23790906 -48362976 + AluJo SINE Alu 1 306 -6 326 284 8 24 chr20 23791515 23791642 -48362240 + MLT2E LTR ERVL 478 602 -26 183 80 0 0 chr20 23792273 23792298 -48361584 + (TAAA)n Simple_repeat Simple_repeat 3 27 0 349 308 92 48 chr20 23792338 23792588 -48361294 + Charlie7 DNA MER1_type 5 265 -2347 2136 127 26 52 chr20 23792613 23792998 -48360884 + THE1C LTR MaLR 1 375 0 628 199 82 7 chr20 23793003 23793149 -48360733 + MER105 DNA DNA 6 162 -42 3841 237 122 23 chr20 23793177 23794453 -48359429 + Charlie7 DNA MER1_type 689 2107 -505 1704 165 0 21 chr20 23794453 23794776 -48359106 + AluJb SINE Alu 5 321 0 3841 237 122 23 chr20 23794776 23794844 -48359038 + Charlie7 DNA MER1_type 2107 2167 -445 283 191 0 15 chr20 23794842 23794910 -48358972 + MER116 DNA Mariner 14 80 0 * 2011 139 3 10 chr20 23795259 23795560 -48358322 + AluJo SINE Alu 1 299 -13 710 219 53 0 chr20 23795909 23796060 -48357822 - L1 LINE L1 -1907 4239 4081 349 177 0 16 chr20 23796132 23796194 -48357688 - L1 LINE L1 -2069 4077 4017 228 207 198 52 chr20 23797278 23797394 -48356488 - L2 LINE L2 -10 3303 3171 735 226 44 0 chr20 23797721 23797902 -48355980 - MER5A DNA MER1_type 0 189 1 14134 204 65 28 chr20 23798293 23800704 -48353178 + L1MA9 LINE L1 1039 3358 -3914 1957 81 0 4 chr20 23800704 23800952 -48352930 - AluY SINE Alu -64 247 1 14134 204 65 28 chr20 23800952 23801175 -48352707 + L1MA9 LINE L1 3358 3571 -3701 1673 112 12 0 chr20 23801175 23801426 -48352456 + L1MA2 LINE L1 6051 6304 0 14134 204 65 28 chr20 23801426 23803447 -48350435 + L1MA9 LINE L1 3571 5713 -1559 1765 158 31 7 chr20 23803447 23803738 -48350144 + AluJo SINE Alu 1 298 -14 14134 204 65 28 chr20 23803738 23805359 -48348523 + L1MA9 LINE L1 5713 7272 0 1798 150 85 12 chr20 23805407 23805747 -48348135 + MLT1A1 LTR MaLR 1 365 0 23 0 0 0 chr20 23806960 23806983 -48346899 + AT_rich Low_complexity Low_complexity 1 23 0 976 249 142 30 chr20 23807836 23808209 -48345673 + L2 LINE L2 2899 3313 0 184 333 85 82 chr20 23808851 23809169 -48344713 + L2 LINE L2 2656 2974 -340 457 253 20 47 chr20 23809298 23809448 -48344434 + L2 LINE L2 3168 3313 0 217 275 38 61 chr20 23810054 23810185 -48343697 + L2 LINE L2 3186 3313 0 23 0 0 0 chr20 23811076 23811099 -48342783 + AT_rich Low_complexity Low_complexity 1 23 0 851 248 56 9 chr20 23811320 23811534 -48342348 - MER58A DNA MER1_type 0 224 1 532 284 36 5 chr20 23811718 23812076 -48341806 - L1ME2 LINE L1 -9 6155 5756 23 54 0 0 chr20 23813134 23813171 -48340711 + AT_rich Low_complexity Low_complexity 1 37 0 1235 290 44 5 chr20 23814203 23814589 -48339293 - LTR16C LTR ERVL -5 486 86 294 319 98 29 chr20 23814602 23814806 -48339076 + MIR SINE MIR 16 233 -29 1598 178 150 89 chr20 23817178 23817604 -48336278 + LTR47A LTR ERVL 1 452 0 332 211 37 41 chr20 23818150 23818355 -48335527 + LTR16C LTR ERVL 215 491 0 512 244 17 0 chr20 23819299 23819414 -48334468 - L1ME2 LINE L1 -9 6155 6039 812 183 0 8 chr20 23819414 23819540 -48334342 + FLAM_C SINE Alu 1 125 -18 488 228 18 0 chr20 23819599 23819713 -48334169 - L1MC4 LINE L1 -170 7872 7757 3139 204 98 31 chr20 23819753 23820568 -48333314 - L1MC4a LINE L1 -97 7711 6842 198 118 0 0 chr20 23821262 23821296 -48332586 + (CA)n Simple_repeat Simple_repeat 2 35 0 893 183 28 47 chr20 23822184 23822397 -48331485 - MER3 DNA MER1_type 0 209 1 771 166 26 57 chr20 23823976 23824169 -48329713 - MER5A DNA MER1_type -2 187 1 1928 166 3 0 chr20 23824627 23824923 -48328959 + AluJo SINE Alu 1 297 -15 309 335 66 26 chr20 23826845 23827072 -48326810 - MIR SINE MIR -9 253 18 409 276 42 36 chr20 23827736 23827913 -48325969 - L1ME2 LINE L1 -11 6153 5982 2565 54 0 3 chr20 23828255 23828553 -48325329 + AluY SINE Alu 1 297 -14 668 270 74 6 chr20 23829319 23829588 -48324294 + LTR16C LTR ERVL 89 431 -60 3002 194 32 15 chr20 23830158 23830757 -48323125 + L1MB5 LINE L1 5552 6160 -14 184 228 120 54 chr20 23830841 23830933 -48322949 - MIR3 SINE MIR -26 182 85 248 262 116 12 chr20 23831733 23831905 -48321977 + L1ME3A LINE L1 5111 5300 -846 1719 204 143 9 chr20 23831991 23832418 -48321464 - MLT1D LTR MaLR 0 505 22 1172 296 66 18 chr20 23832440 23832504 -48321378 + L1ME3A LINE L1 5406 5465 -705 225 0 0 0 chr20 23832504 23832529 -48321353 + (TTA)n Simple_repeat Simple_repeat 1 25 0 1172 296 66 18 chr20 23832529 23832978 -48320904 + L1ME3A LINE L1 5465 5944 -226 262 233 0 35 chr20 23833160 23833246 -48320636 + L1MC5 LINE L1 7846 7928 -33 1217 229 30 52 chr20 23833339 23833705 -48320177 + Charlie4a DNA MER1_type 1 358 -150 876 195 18 59 chr20 23834524 23834745 -48319137 - L1ME LINE L1 -586 5580 5369 405 58 0 0 chr20 23834747 23834799 -48319083 + (CA)n Simple_repeat Simple_repeat 1 52 0 198 271 0 0 chr20 23834814 23834862 -48319020 - MIR SINE MIR -8 254 207 609 238 41 26 chr20 23834862 23835173 -48318709 - L1ME1 LINE L1 0 6184 5798 1926 231 68 2 chr20 23835202 23835674 -48318208 - L1ME1 LINE L1 -295 5871 5369 207 320 130 0 chr20 23835773 23835873 -48318009 + L2 LINE L2 3192 3304 -9 1657 152 5 127 chr20 23836160 23836554 -48317328 - MER7A DNA MER2_type 0 346 3 382 294 76 15 chr20 23836753 23836950 -48316932 + MIR SINE MIR 48 256 -6 683 236 73 94 chr20 23836978 23837444 -48316438 + LTR16A1 LTR ERVL 2 457 0 225 308 26 0 chr20 23838978 23839056 -48314826 + GA-rich Low_complexity Low_complexity 3 82 0 1114 289 110 33 chr20 23839579 23840033 -48313849 - LTR16C LTR ERVL -2 489 1 334 239 0 0 chr20 23840905 23840972 -48312910 + MER3 DNA MER1_type 3 69 -140 284 332 73 27 chr20 23841430 23841650 -48312232 - MIR SINE MIR -29 233 4 3161 163 40 11 chr20 23841834 23842433 -48311449 - L1MC3 LINE L1 -4 7781 5723 2519 61 5 84 chr20 23842535 23842929 -48310953 - L1PB1 LINE L1 -2 6149 5787 695 131 0 61 chr20 23842937 23843302 -48310580 + (TA)n Simple_repeat Simple_repeat 1 342 0 3888 70 21 2 chr20 23843304 23843832 -48310050 - L1PB1 LINE L1 -360 5791 5254 2145 247 131 3 chr20 23843835 23844500 -48309382 - L1ME1 LINE L1 -1359 4787 4038 1192 282 22 47 chr20 23844572 23844976 -48308906 + LTR16C LTR ERVL 97 490 -1 225 300 30 30 chr20 23845566 23845666 -48308216 + L2 LINE L2 2791 2890 -424 616 227 79 35 chr20 23845905 23846108 -48307774 - MIR SINE MIR -15 247 36 2502 71 3 3 chr20 23846284 23846592 -48307290 - AluY SINE Alu -2 309 2 290 256 29 51 chr20 23846768 23846905 -48306977 - L1ME4a LINE L1 -214 5907 5774 379 285 15 10 chr20 23847964 23848108 -48305774 - MER5A DNA MER1_type -5 184 31 413 246 44 9 chr20 23848202 23848316 -48305566 + MER5B DNA MER1_type 34 151 -27 2329 184 24 15 chr20 23848863 23849326 -48304556 - MLT1C LTR MaLR 0 467 1 369 289 111 31 chr20 23850529 23850754 -48303128 - MIR SINE MIR -2 260 18 657 232 119 54 chr20 23851311 23851748 -48302134 + MLT1H LTR MaLR 29 547 -2 2334 88 3 0 chr20 23851888 23852219 -48301663 - AluSp SINE Alu 0 332 1 1988 109 51 3 chr20 23852699 23852993 -48300889 + AluSx SINE Alu 1 308 -4 714 205 88 41 chr20 23853002 23853173 -48300709 - MER58A DNA MER1_type 0 224 46 357 280 9 19 chr20 23853387 23853494 -48300388 + MER117 DNA MER1_type 57 162 -35 584 209 190 12 chr20 23854211 23854374 -48299508 - MER3 DNA MER1_type -3 206 15 611 323 25 29 chr20 23854454 23854733 -48299149 + LTR16C LTR ERVL 88 365 -126 529 298 98 20 chr20 23855018 23855313 -48298569 + MARNA DNA Mariner 261 578 -8 381 170 28 38 chr20 23855335 23855441 -48298441 - L1MB8 LINE L1 0 6178 6074 396 55 0 0 chr20 23855704 23855759 -48298123 + (CA)n Simple_repeat Simple_repeat 1 55 0 684 308 101 15 chr20 23857102 23857662 -48296220 + L2 LINE L2 2631 3241 -72 452 262 7 7 chr20 23857768 23857909 -48295973 - L1MC4 LINE L1 -10 8032 7892 335 146 10 31 chr20 23857919 23858015 -48295867 + (TCTA)n Simple_repeat Simple_repeat 3 96 0 2167 244 124 41 chr20 23858034 23858930 -48294952 - L1MC4 LINE L1 -132 7910 6941 1351 277 146 38 chr20 23860128 23861592 -48292290 + L2 LINE L2 1681 3312 -1 24 53 0 0 chr20 23862309 23862347 -48291535 + AT_rich Low_complexity Low_complexity 1 38 0 1594 171 4 21 chr20 23862534 23862814 -48291068 + AluJb SINE Alu 36 310 -2 463 279 101 4 chr20 23862845 23863017 -48290865 + LTR33 LTR ERVL 3 216 -305 343 267 97 12 chr20 23863064 23863229 -48290653 + LTR33 LTR ERVL 334 512 -9 1547 139 43 18 chr20 23863284 23863537 -48290345 + MER46B DNA MER2_type 1 138 -2593 420 20 0 0 chr20 23863537 23863586 -48290296 + (TC)n Simple_repeat Simple_repeat 2 50 0 1547 139 43 18 chr20 23863586 23863612 -48290270 + MER46B DNA MER2_type 138 162 -74 253 130 0 0 chr20 23863592 23863638 -48290244 - LTR66 LTR ERVL -171 439 394 * 420 111 0 157 chr20 23863657 23863765 -48290117 + MER46B DNA MER2_type 146 236 0 1513 180 53 7 chr20 23863920 23864084 -48289798 - AluJo SINE Alu -15 297 113 264 30 0 0 chr20 23864084 23864117 -48289765 + (TTA)n Simple_repeat Simple_repeat 2 34 0 1513 180 53 7 chr20 23864117 23864236 -48289646 - AluJo SINE Alu -199 113 1 233 344 48 0 chr20 23865309 23865434 -48288448 - MIR SINE MIR -9 253 123 22 35 0 0 chr20 23865888 23865917 -48287965 + AT_rich Low_complexity Low_complexity 1 29 0 2848 19 0 0 chr20 23866146 23866457 -48287425 - AluY SINE Alu 0 311 1 945 238 220 34 chr20 23866865 23866952 -48286930 + L1MC4 LINE L1 6949 7018 -1024 674 24 0 12 chr20 23866952 23867037 -48286845 + (GGAA)n Simple_repeat Simple_repeat 3 86 0 945 238 220 34 chr20 23867037 23867507 -48286375 + L1MC4 LINE L1 7018 7610 -432 435 203 28 70 chr20 23868120 23868263 -48285619 + L1MC4 LINE L1 7768 7904 -138 180 77 0 0 chr20 23868266 23868292 -48285590 + (TA)n Simple_repeat Simple_repeat 1 26 0 225 212 0 106 chr20 23868300 23868366 -48285516 - MER2 DNA MER2_type 0 345 287 209 243 14 0 chr20 23868374 23868444 -48285438 + (CATATA)n Simple_repeat Simple_repeat 4 74 0 1464 181 148 13 chr20 23868457 23868760 -48285122 - MER2 DNA MER2_type 0 344 1 1582 240 99 5 chr20 23871057 23871503 -48282379 - LTR16C LTR ERVL 0 491 4 1963 148 0 3 chr20 23872067 23872385 -48281497 - L1P LINE L1 -1011 5135 4819 1341 66 0 28 chr20 23872385 23872561 -48281321 + L1PA11 LINE L1 5998 6173 -1 1760 195 13 81 chr20 23873141 23873588 -48280294 + MER47B DNA MER2_type 1 417 -1 1787 151 0 3 chr20 23874767 23875119 -48278763 + AluJb SINE Alu 1 351 0 2067 121 7 0 chr20 23876047 23876353 -48277529 + AluSx SINE Alu 1 308 -4 227 234 48 130 chr20 23877751 23877982 -48275900 + L2 LINE L2 3019 3230 -42 580 97 0 52 chr20 23878264 23878398 -48275484 + (GGAA)n Simple_repeat Simple_repeat 3 129 0 259 273 13 0 chr20 23879076 23879153 -48274729 - MER5A DNA MER1_type -103 86 9 590 207 88 26 chr20 23879796 23879970 -48273912 - MER5A DNA MER1_type 0 189 4 321 377 42 19 chr20 23879982 23880194 -48273688 - MIR SINE MIR -31 231 15 2386 69 0 0 chr20 23881601 23881905 -48271977 - L1PA8 LINE L1 -2 6170 5867 238 293 32 49 chr20 23881996 23882119 -48271763 - MIR3 SINE MIR -5 203 83 * 298 289 58 41 chr20 23882095 23882216 -48271666 - MIR SINE MIR -12 250 128 205 301 54 11 chr20 23882345 23882438 -48271444 - L2 LINE L2 -2889 425 329 243 0 0 0 chr20 23882483 23882510 -48271372 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5631 151 48 1 chr20 23882510 23883817 -48270065 - L1PA16 LINE L1 -3 6163 4790 400 271 35 14 chr20 23884825 23884969 -48268913 - MER69A DNA AcHobo -2 175 29 269 257 79 10 chr20 23884990 23885091 -48268791 - MIR SINE MIR -95 167 60 4130 103 8 5 chr20 23885779 23886378 -48267504 + L1PA15 LINE L1 5563 6163 -2 269 281 11 0 chr20 23886514 23886603 -48267279 + L1ME2 LINE L1 5728 5817 -345 291 252 25 67 chr20 23887040 23887159 -48266723 - L2 LINE L2 -1 3312 3199 507 318 133 52 chr20 23887605 23888011 -48265871 + L3 LINE CR1 1134 1572 -5 797 275 203 15 chr20 23888789 23889266 -48264616 - MLT1F1 LTR MaLR 0 567 1 393 22 0 0 chr20 23890158 23890204 -48263678 + (CA)n Simple_repeat Simple_repeat 2 47 0 1445 213 22 0 chr20 23890341 23890614 -48263268 + LTR16C LTR ERVL 61 339 -152 185 156 0 22 chr20 23890722 23890767 -48263115 + T-rich Low_complexity Low_complexity 2 45 0 622 175 8 24 chr20 23890771 23890897 -48262985 + LTR16C LTR ERVL 353 476 -15 228 250 0 16 chr20 23891722 23891786 -48262096 + (TATATG)n Simple_repeat Simple_repeat 6 68 0 996 199 74 30 chr20 23891798 23892095 -48261787 + L1ME2 LINE L1 5834 6143 -21 373 222 42 0 chr20 23892394 23892466 -48261416 - MER2 DNA MER2_type 0 345 271 2394 160 10 0 chr20 23892467 23892860 -48261022 - L1P LINE L1 -3340 2806 2410 8233 126 15 5 chr20 23892864 23894168 -48259714 + L1PA10 LINE L1 2983 4299 -1847 6073 91 26 31 chr20 23894175 23895089 -48258793 + L1PA10 LINE L1 5254 6163 -5 1151 119 0 40 chr20 23895325 23895501 -48258381 - MER2 DNA MER2_type -176 169 1 2198 106 3 0 chr20 23895706 23896008 -48257874 - AluSq SINE Alu -10 303 1 1751 196 28 22 chr20 23896293 23896656 -48257226 + MLT1A1 LTR MaLR 1 365 0 251 310 0 0 chr20 23897222 23897293 -48256589 - MIR SINE MIR -112 150 80 2062 189 0 11 chr20 23898697 23899056 -48254826 - MLT1A1 LTR MaLR -9 356 2 371 224 103 17 chr20 23899061 23899172 -48254710 - MER5B DNA MER1_type -39 139 19 667 259 0 0 chr20 23899172 23899334 -48254548 - MER5A DNA MER1_type 0 189 28 293 296 37 37 chr20 23899412 23899547 -48254335 + MIR3 SINE MIR 11 145 -63 1016 207 18 9 chr20 23900378 23900600 -48253282 - MER58A DNA MER1_type 0 224 1 426 303 122 27 chr20 23901357 23901578 -48252304 - MIR SINE MIR -1 261 20 986 261 141 20 chr20 23901918 23902316 -48251566 + MLT1J2 LTR MaLR 1 446 -4 761 164 7 0 chr20 23902559 23902699 -48251183 + Charlie5 DNA MER1_type 2444 2584 -28 208 269 71 56 chr20 23902754 23902912 -48250970 + MIR SINE MIR 43 194 -14 2059 131 0 0 chr20 23903879 23904184 -48249698 - AluJb SINE Alu -5 307 3 247 262 16 0 chr20 23904313 23904374 -48249508 + GA-rich Low_complexity Low_complexity 4 65 0 188 304 104 16 chr20 23905584 23905709 -48248173 - MIR SINE MIR -48 214 79 577 226 97 7 chr20 23905848 23906003 -48247879 + MER3 DNA MER1_type 6 127 -82 195 69 0 0 chr20 23907057 23907086 -48246796 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 718 260 73 0 chr20 23907443 23907635 -48246247 + MER58C DNA MER1_type 8 213 -2 957 248 11 49 chr20 23908566 23908727 -48245155 + LTR16C LTR ERVL 236 385 -106 848 234 24 19 chr20 23908727 23908932 -48244950 + MER63A DNA MER1_type 1 206 -4 957 248 11 49 chr20 23908932 23909036 -48244846 + LTR16C LTR ERVL 385 491 0 243 338 35 15 chr20 23909773 23909971 -48243911 - L2 LINE L2 -1216 2098 1897 231 297 31 0 chr20 23910316 23910380 -48243502 + L2 LINE L2 3198 3263 -9 1128 313 81 7 chr20 23910921 23911330 -48242552 - LTR16C LTR ERVL 0 491 53 646 278 98 24 chr20 23912032 23912237 -48241645 - MIR SINE MIR -12 250 31 1709 163 92 21 chr20 23912407 23912469 -48241413 + MER7A DNA MER2_type 1 57 -2981 1725 155 38 0 chr20 23912469 23912759 -48241123 - AluJo SINE Alu -11 301 1 1709 163 92 21 chr20 23912759 23913021 -48240861 + MER7A DNA MER2_type 57 346 0 183 182 0 0 chr20 23916409 23916442 -48237440 + L2 LINE L2 3030 3062 -210 180 250 28 0 chr20 23916755 23916791 -48237091 - MIR SINE MIR -131 77 41 412 164 0 0 chr20 23916824 23916891 -48236991 + MER5A DNA MER1_type 4 70 -119 5490 87 17 1 chr20 23917398 23918146 -48235736 - L1PB1 LINE L1 -2 6149 5390 206 184 35 11 chr20 23918532 23918619 -48235263 + CT-rich Low_complexity Low_complexity 1 89 0 1154 193 138 55 chr20 23918672 23918999 -48234883 + MLT1A1 LTR MaLR 12 365 0 428 221 21 0 chr20 23919059 23919154 -48234728 - MER5A DNA MER1_type -84 105 9 880 209 39 0 chr20 23920120 23920302 -48233580 + MER3 DNA MER1_type 3 191 -18 297 306 104 28 chr20 23920770 23920914 -48232968 + MIR3 SINE MIR 47 201 -7 391 291 75 69 chr20 23920989 23921309 -48232573 + Charlie7 DNA MER1_type 35 356 -2256 2049 219 45 105 chr20 23921323 23922370 -48231512 + Charlie7 DNA MER1_type 1494 2477 -135 426 202 71 20 chr20 23922378 23922477 -48231405 - MER69 DNA AcHobo -2 2524 2421 190 314 215 16 chr20 23923149 23923270 -48230612 + L2 LINE L2 3149 3293 -20 225 302 16 0 chr20 23923487 23923550 -48230332 + MLT1K LTR MaLR 184 247 -341 477 236 51 82 chr20 23923609 23923804 -48230078 + MLT1K LTR MaLR 366 554 -34 615 306 45 4 chr20 23924312 23924554 -48229328 - LTR16C LTR ERVL 0 491 240 2129 91 0 14 chr20 23924625 23924910 -48228972 - AluSx SINE Alu -2 310 30 358 100 33 0 chr20 23925205 23925265 -48228617 - AluJb SINE Alu -2 300 239 675 179 152 20 chr20 23925274 23925425 -48228457 - AluJb SINE Alu -140 172 2 351 0 0 0 chr20 23926309 23926348 -48227534 + (CA)n Simple_repeat Simple_repeat 2 40 0 618 252 93 71 chr20 23926730 23926951 -48226931 + MLT1L LTR MaLR 101 337 -278 2767 13 0 7 chr20 23926951 23927260 -48226622 - AluY SINE Alu -4 307 1 618 252 93 71 chr20 23927260 23927447 -48226435 + MLT1L LTR MaLR 337 518 -97 1681 162 13 44 chr20 23927733 23928048 -48225834 + AluJo SINE Alu 1 305 -7 291 288 39 65 chr20 23928986 23929139 -48224743 - MIR SINE MIR -36 226 78 2146 113 7 0 chr20 23930663 23930954 -48222928 - AluSg SINE Alu -13 297 5 869 214 0 12 chr20 23931390 23931558 -48222324 + FRAM SINE Alu 1 166 0 858 134 43 0 chr20 23932385 23932549 -48221333 - MER33 DNA MER1_type -4 320 150 2211 137 0 0 chr20 23932588 23932895 -48220987 - AluJb SINE Alu -5 307 1 1862 153 18 21 chr20 23932897 23933236 -48220646 - L1MB8 LINE L1 -33 6145 5808 1806 158 3 14 chr20 23933252 23933568 -48220314 - AluJo SINE Alu 0 313 1 754 200 39 0 chr20 23933569 23933724 -48220158 - MER33 DNA MER1_type -163 161 1 229 209 105 92 chr20 23933724 23933877 -48220005 - MIR3 SINE MIR -48 160 6 768 246 22 0 chr20 23934398 23934581 -48219301 - MIR SINE MIR -74 188 2 381 141 31 0 chr20 23935287 23935351 -48218531 + Charlie8 DNA MER1_type 118 183 -2234 814 255 84 21 chr20 23937690 23937976 -48215906 + LTR16C LTR ERVL 188 491 0 404 307 34 17 chr20 23938415 23938591 -48215291 + MIR SINE MIR 54 232 -30 3027 192 125 15 chr20 23939496 23940215 -48213667 + Tigger6a DNA MER2_type 72 869 -214 615 190 8 0 chr20 23940216 23940337 -48213545 - L1MA7 LINE L1 -11 6280 6159 3298 155 23 0 chr20 23940338 23940867 -48213015 - L1MA7 LINE L1 -241 6050 5510 810 224 28 0 chr20 23940868 23941082 -48212800 + Tigger6a DNA MER2_type 844 1063 -20 213 94 0 0 chr20 23941234 23941266 -48212616 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 237 299 9 28 chr20 23941396 23941503 -48212379 - MIR SINE MIR -88 174 70 844 199 105 22 chr20 23941542 23941809 -48212073 - MER33 DNA MER1_type -19 305 17 276 323 85 5 chr20 23942282 23942505 -48211377 - L1MEd LINE L1 -1908 4221 3981 380 151 57 9 chr20 23942535 23942641 -48211241 + (CAGAGA)n Simple_repeat Simple_repeat 4 114 0 395 270 51 51 chr20 23942929 23943166 -48210716 - L1MEd LINE L1 -2875 3254 3018 648 241 60 99 chr20 23943270 23943805 -48210077 - L1MEd LINE L1 -3384 2745 2232 28 61 0 0 chr20 23943983 23944032 -48209850 + AT_rich Low_complexity Low_complexity 1 49 0 1114 297 91 40 chr20 23944064 23944637 -48209245 - L1MEd LINE L1 -5492 627 26 1872 172 82 0 chr20 23946415 23946804 -48207078 + LTR37A LTR ERV1 5 425 -1 543 240 101 40 chr20 23948436 23948732 -48205150 + LTR16A1 LTR ERVL 55 368 -89 25 0 0 0 chr20 23950243 23950268 -48203614 + AT_rich Low_complexity Low_complexity 1 25 0 210 171 0 0 chr20 23950392 23950433 -48203449 + (TG)n Simple_repeat Simple_repeat 1 41 0 1122 248 138 28 chr20 23950817 23951369 -48202513 + L1ME3A LINE L1 5552 6170 0 1864 163 0 13 chr20 23952596 23952902 -48200980 - AluJo SINE Alu 0 312 11 250 313 0 0 chr20 23954125 23954189 -48199693 - MER91A DNA MER1_type -23 173 110 567 218 26 57 chr20 23955019 23955212 -48198670 - MER5A DNA MER1_type 0 189 3 258 306 157 8 chr20 23955469 23955603 -48198279 - MIR3 SINE MIR -40 168 15 374 252 39 39 chr20 23957382 23957509 -48196373 - L2 LINE L2 -56 3257 3131 2204 189 43 32 chr20 23957631 23958124 -48195758 - MLT1D LTR MaLR -7 498 1 326 314 107 27 chr20 23960301 23960629 -48193253 + L1M4 LINE L1 3467 3820 -2326 356 314 63 0 chr20 23960685 23960860 -48193022 - L1ME4a LINE L1 -215 5906 5721 331 278 11 0 chr20 23961464 23961554 -48192328 + L2 LINE L2 3182 3272 0 390 205 112 77 chr20 23961655 23961771 -48192111 + L1ME4a LINE L1 5602 5712 -409 2276 117 0 0 chr20 23961771 23962070 -48191812 + AluSx SINE Alu 1 299 -13 390 205 112 77 chr20 23962070 23962316 -48191566 + L1ME4a LINE L1 5712 6119 -2 381 43 0 0 chr20 23964232 23964279 -48189603 + (CA)n Simple_repeat Simple_repeat 1 47 0 414 187 57 41 chr20 23966182 23966305 -48187577 + L2 LINE L2 3189 3313 0 375 293 63 23 chr20 23966651 23966825 -48187057 + L2 LINE L2 2872 3052 -220 386 191 7 21 chr20 23967046 23967144 -48186738 - LTR54 LTR ERV1 -21 477 384 820 267 0 5 chr20 23967414 23967624 -48186258 - MER3 DNA MER1_type 0 209 1 1465 238 67 26 chr20 23968404 23968790 -48185092 - LTR16C LTR ERVL 0 491 90 241 306 12 12 chr20 23968891 23968976 -48184906 + MIR3 SINE MIR 90 174 -34 240 222 56 14 chr20 23969374 23969446 -48184436 - MIR SINE MIR -24 238 164 4193 232 45 17 chr20 23969506 23970607 -48183275 + L1ME4a LINE L1 43 1174 -5222 3109 226 100 29 chr20 23970605 23971665 -48182217 + L1ME4a LINE L1 2609 3743 -2472 * 2021 215 43 38 chr20 23971671 23972257 -48181625 + L1ME4a LINE L1 4107 4695 -1520 273 57 0 0 chr20 23972793 23972828 -48181054 + (A)n Simple_repeat Simple_repeat 1 35 0 1226 206 39 0 chr20 23973878 23974191 -48179691 + MER33 DNA MER1_type 1 314 -10 276 329 28 44 chr20 23974550 23974799 -48179083 + L2 LINE L2 2814 3058 -214 4819 200 25 13 chr20 23975098 23976977 -48176905 - L1MB2 LINE L1 0 6171 4269 380 253 67 17 chr20 23977027 23977205 -48176677 + L1ME4a LINE L1 5935 6121 0 315 152 136 0 chr20 23977826 23977892 -48175990 + L2 LINE L2 3219 3293 -20 502 224 12 16 chr20 23979573 23979825 -48174057 + GA-rich Low_complexity Low_complexity 1 250 0 810 297 97 31 chr20 23980987 23981911 -48171971 + L1ME4a LINE L1 5199 6190 0 387 151 41 0 chr20 23982758 23982831 -48171051 + L1MA10 LINE L1 6259 6334 0 382 267 30 22 chr20 23983115 23983250 -48170632 + MIR SINE MIR 4 139 -123 424 302 30 91 chr20 23983260 23983525 -48170357 - MIR SINE MIR 0 262 14 299 267 11 11 chr20 23983589 23983679 -48170203 + LTR67 LTR ERVL 466 555 -2 342 326 75 65 chr20 23983951 23984338 -48169544 - L2 LINE L2 -23 3249 2859 2669 269 58 62 chr20 23984463 23985851 -48168031 + HAL1 LINE L1 2 1384 -1123 31 0 0 0 chr20 23985851 23985882 -48168000 + AT_rich Low_complexity Low_complexity 1 31 0 2111 202 35 79 chr20 23985882 23986502 -48167380 + L1MC5 LINE L1 6709 7301 -660 6515 11 0 0 chr20 23987007 23987726 -48166156 - L1HS LINE L1 0 6155 5437 * 7449 20 0 23 chr20 23987717 23988654 -48165228 + L1P LINE L1 4511 5421 -734 441 289 224 23 chr20 23988712 23988767 -48165115 - LTR16C LTR ERVL -63 428 385 1761 160 47 32 chr20 23988767 23989105 -48164777 - MER61A LTR ERV1 0 343 1 441 289 224 23 chr20 23989105 23989312 -48164570 - LTR16C LTR ERVL -106 385 113 183 313 24 12 chr20 23989371 23989454 -48164428 - MIR SINE MIR -175 87 4 685 198 19 19 chr20 23989734 23989896 -48163986 - MER5B DNA MER1_type 0 178 17 1818 246 163 77 chr20 23991400 23991587 -48162295 - L1MC4 LINE L1 0 8042 7873 1848 95 6 143 chr20 23991587 23991945 -48161937 + AluSg1 SINE Alu 1 309 0 1818 246 163 77 chr20 23991945 23992202 -48161680 - L1MC4 LINE L1 -169 7873 7640 2430 92 0 0 chr20 23992202 23992495 -48161387 + AluSg SINE Alu 1 293 -17 1818 246 163 77 chr20 23992495 23993380 -48160502 - L1MC4 LINE L1 -402 7640 6500 316 283 205 49 chr20 23993389 23993696 -48160186 - L1MC4a LINE L1 -1341 6467 6113 * 714 271 108 5 chr20 23993688 23993902 -48159980 - L1MC4a LINE L1 -2024 5784 5549 183 368 16 8 chr20 23993923 23994048 -48159834 - L2 LINE L2 -639 2675 2550 423 217 0 0 chr20 23994211 23994317 -48159565 + (TG)n Simple_repeat Simple_repeat 1 106 0 315 315 18 9 chr20 23997564 23997675 -48156207 + GA-rich Low_complexity Low_complexity 3 114 0 226 345 0 0 chr20 23997840 23997924 -48155958 + (CA)n Simple_repeat Simple_repeat 1 84 0 198 301 0 0 chr20 23997936 23998059 -48155823 + (CA)n Simple_repeat Simple_repeat 1 123 0 352 267 51 37 chr20 23998392 23998609 -48155273 - LTR16B LTR ERVL -12 452 233 232 91 0 0 chr20 23998638 23998671 -48155211 - LTR16B LTR ERVL -308 156 124 195 264 132 33 chr20 23999038 23999159 -48154723 + L3b LINE CR1 1332 1464 -119 219 78 59 0 chr20 23999437 23999488 -48154394 + (TA)n Simple_repeat Simple_repeat 1 54 0 941 56 87 0 chr20 24000062 24000188 -48153694 - MER85 DNA T2_type -2 137 1 347 137 0 0 chr20 24000842 24000893 -48152989 - MER74A LTR ERVL -30 528 478 791 153 35 7 chr20 24000895 24001039 -48152843 - LTR56 LTR ERV1 -297 148 1 * 1230 197 27 23 chr20 24001039 24001295 -48152587 - MER74A LTR ERVL -301 257 1 332 329 53 7 chr20 24002308 24002460 -48151422 + MIR SINE MIR 9 167 -95 308 318 73 0 chr20 24003239 24003349 -48150533 - MIR SINE MIR 0 262 145 1948 123 70 25 chr20 24004342 24004701 -48149181 + THE1C LTR MaLR 1 375 0 198 0 0 0 chr20 24007825 24007847 -48146035 + (T)n Simple_repeat Simple_repeat 1 22 0 198 370 11 0 chr20 24008373 24008489 -48145393 + MIR SINE MIR 53 135 -73 5779 224 41 66 chr20 24008685 24012050 -48141832 - L1MC2 LINE L1 -8 6336 3067 261 0 0 0 chr20 24012050 24012079 -48141803 + (TTG)n Simple_repeat Simple_repeat 2 30 0 5779 224 41 66 chr20 24012079 24012226 -48141656 - L1MC2 LINE L1 -3277 3067 2918 805 226 77 10 chr20 24012597 24012805 -48141077 - LTR16C LTR ERVL 0 491 270 211 235 15 44 chr20 24013147 24013215 -48140667 - MIR SINE MIR -70 192 127 246 241 0 0 chr20 24013862 24013916 -48139966 + MIR SINE MIR 61 114 -94 242 267 0 0 chr20 24014148 24014208 -48139674 + L3 LINE CR1 655 714 -863 430 283 94 28 chr20 24014237 24014449 -48139433 + MIR SINE MIR 20 245 -17 183 80 0 0 chr20 24014743 24014768 -48139114 + (CAAAA)n Simple_repeat Simple_repeat 5 29 0 222 313 23 31 chr20 24015904 24016032 -48137850 + MIR SINE MIR 123 249 -13 2149 136 0 3 chr20 24017896 24018197 -48135685 + AluSx SINE Alu 1 300 -12 553 209 54 8 chr20 24018214 24018343 -48135539 + L1ME3A LINE L1 6027 6161 -9 412 255 0 10 chr20 24018400 24018502 -48135380 - MER91A DNA MER1_type -88 108 8 441 0 0 0 chr20 24019556 24019605 -48134277 + (TG)n Simple_repeat Simple_repeat 2 50 0 1395 133 9 156 chr20 24019910 24020083 -48133799 + AluJo SINE Alu 1 104 -208 2142 94 4 0 chr20 24020083 24020380 -48133502 + AluSg1 SINE Alu 3 300 0 1395 133 9 156 chr20 24020380 24020543 -48133339 + AluJo SINE Alu 104 289 -23 693 304 82 63 chr20 24021483 24022035 -48131847 + L3 LINE CR1 334 895 -682 294 232 0 0 chr20 24022258 24022314 -48131568 - MLT1L LTR MaLR -407 208 153 733 326 128 11 chr20 24022649 24023008 -48130874 + LTR16C LTR ERVL 89 489 -2 2047 138 19 41 chr20 24023422 24023784 -48130098 + THE1A LTR MaLR 2 355 0 330 355 74 0 chr20 24024422 24024543 -48129339 + MIR3 SINE MIR 42 171 -37 1954 141 90 15 chr20 24025534 24025924 -48127958 - L1MB3 LINE L1 0 6183 5765 479 211 162 21 chr20 24027067 24027209 -48126673 - MER5A DNA MER1_type -7 182 21 517 226 0 131 chr20 24027229 24027428 -48126454 + MER96 DNA MER1_type? 3 175 0 262 261 68 34 chr20 24027748 24027836 -48126046 - MIR SINE MIR -171 91 1 219 114 0 0 chr20 24028528 24028563 -48125319 + (CATATA)n Simple_repeat Simple_repeat 2 36 0 227 241 96 12 chr20 24028566 24028649 -48125233 - L1MC4 LINE L1 -1339 6703 6614 381 272 108 89 chr20 24028651 24028700 -48125182 - MIR SINE MIR -17 245 198 2195 122 0 0 chr20 24028700 24029012 -48124870 - AluSx SINE Alu 0 312 1 381 272 108 89 chr20 24029012 24029175 -48124707 - MIR SINE MIR -64 198 29 399 152 8 149 chr20 24029183 24029318 -48124564 - L1PA15 LINE L1 0 6165 6050 399 250 19 19 chr20 24029327 24029435 -48124447 - MER5A DNA MER1_type 0 189 82 1040 72 78 0 chr20 24029450 24029603 -48124279 - AluY SINE Alu -14 297 133 262 176 15 59 chr20 24029605 24029673 -48124209 - MER5A DNA MER1_type -124 65 1 374 361 143 16 chr20 24030239 24030483 -48123399 - L1ME4a LINE L1 -227 5894 5620 195 250 0 0 chr20 24031543 24031595 -48122287 + (CA)n Simple_repeat Simple_repeat 1 52 0 206 253 0 0 chr20 24031938 24031994 -48121888 - MIR SINE MIR -114 148 94 1027 224 5 10 chr20 24032104 24032309 -48121573 + MER3 DNA MER1_type 1 204 -5 287 164 0 36 chr20 24032272 24032327 -48121555 - MER3 DNA MER1_type -120 89 37 * 23 0 0 0 chr20 24032559 24032582 -48121300 + AT_rich Low_complexity Low_complexity 1 23 0 537 259 47 29 chr20 24032980 24033150 -48120732 + MER5B DNA MER1_type 3 175 -3 421 250 107 36 chr20 24034043 24034239 -48119643 - L2 LINE L2 0 3313 3104 2395 296 188 34 chr20 24034249 24034778 -48119104 - L2 LINE L2 -576 2738 2292 2124 117 0 0 chr20 24034778 24035076 -48118806 + AluSx SINE Alu 1 298 -14 2395 296 188 34 chr20 24035076 24036508 -48117374 - L2 LINE L2 -1022 2292 474 348 347 71 6 chr20 24036748 24036918 -48116964 + MIR3 SINE MIR 22 202 -6 239 293 0 0 chr20 24037744 24037802 -48116080 + (CA)n Simple_repeat Simple_repeat 1 58 0 255 321 69 61 chr20 24040700 24040831 -48113051 - MIR SINE MIR -110 152 21 281 306 41 16 chr20 24041604 24041725 -48112157 + L1MC4a LINE L1 3742 3865 -2281 1627 165 53 28 chr20 24041796 24042117 -48111765 - L1MA7 LINE L1 -25 6266 5938 2325 70 0 3 chr20 24042236 24042534 -48111348 + AluY SINE Alu 1 297 -14 496 339 66 18 chr20 24042605 24042879 -48111003 + L1MC4a LINE L1 4177 4463 -1683 1195 224 18 4 chr20 24043551 24043832 -48110050 + L1MC4a LINE L1 5003 5287 -859 212 306 82 20 chr20 24045994 24046092 -48107790 + L2 LINE L2 3168 3271 -1 935 231 137 19 chr20 24046653 24046960 -48106922 - LTR16C LTR ERVL 0 491 149 261 335 68 6 chr20 24047128 24047289 -48106593 + MIR SINE MIR 90 260 -2 266 277 117 36 chr20 24047375 24047512 -48106370 + MIR3 SINE MIR 16 163 -45 218 287 69 23 chr20 24048264 24048351 -48105531 - L2 LINE L2 -45 3227 3137 498 296 151 15 chr20 24048448 24048654 -48105228 - MIR SINE MIR 0 262 29 262 340 21 43 chr20 24049013 24049154 -48104728 + L2 LINE L2 2252 2389 -925 295 296 133 48 chr20 24049162 24049561 -48104321 + L2 LINE L2 2545 2977 -337 294 282 13 0 chr20 24049739 24049817 -48104065 + L2 LINE L2 3235 3313 0 2787 178 31 28 chr20 24051112 24051301 -48102581 + L1MB2 LINE L1 5593 5780 -391 2267 143 8 0 chr20 24051301 24051657 -48102225 - MER46B DNA MER2_type -2 234 1 2787 178 31 28 chr20 24051657 24052041 -48101841 + L1MB2 LINE L1 5780 6168 -3 768 301 92 29 chr20 24052094 24052613 -48101269 + L1MC4a LINE L1 5384 5935 -1873 384 245 8 32 chr20 24053504 24053631 -48100251 + L1ME1 LINE L1 6033 6156 -22 279 329 185 14 chr20 24054140 24054286 -48099596 + MIR SINE MIR 14 184 -78 1646 133 42 9 chr20 24055820 24056165 -48097717 - Tigger4(Zombi) DNA MER2_type 0 2731 1 348 274 98 20 chr20 24058896 24059100 -48094782 - LTR16C LTR ERVL -79 412 193 503 364 32 8 chr20 24059419 24059672 -48094210 + MIR SINE MIR 2 260 -2 24 0 0 0 chr20 24059939 24059963 -48093919 + AT_rich Low_complexity Low_complexity 1 24 0 918 254 163 10 chr20 24062050 24062443 -48091439 - LTR16A1 LTR ERVL 0 457 5 287 328 46 6 chr20 24063757 24063931 -48089951 - LTR16C LTR ERVL -4 487 307 3779 124 8 2 chr20 24065044 24065568 -48088314 + MER1A DNA MER1_type 1 527 -2 845 245 115 68 chr20 24065854 24066418 -48087464 + MLT1H1 LTR MaLR 2 546 -9 710 224 45 45 chr20 24066429 24066652 -48087230 - MLT1A1 LTR MaLR 0 365 143 383 252 39 4 chr20 24066645 24066766 -48087116 - FLAM_A SINE Alu -11 122 1 * 733 147 124 8 chr20 24066771 24066900 -48086982 - MLT1A1 LTR MaLR -217 148 5 289 137 20 59 chr20 24066945 24067047 -48086835 + (CATA)n Simple_repeat Simple_repeat 2 99 0 627 284 53 47 chr20 24069206 24069586 -48084296 + L1ME LINE L1 112 493 -5577 326 245 32 0 chr20 24069817 24069911 -48083971 + L1ME LINE L1 531 627 -5443 1628 158 44 30 chr20 24069928 24070226 -48083656 + AluJo SINE Alu 1 302 -10 21 36 0 0 chr20 24071579 24071607 -48082275 + AT_rich Low_complexity Low_complexity 1 28 0 1279 258 69 36 chr20 24072640 24073032 -48080850 - LTR16C LTR ERVL -2 489 85 516 303 11 32 chr20 24073171 24073356 -48080526 - MIR SINE MIR -46 216 36 455 268 54 36 chr20 24073677 24073845 -48080037 + MIR SINE MIR 37 207 -55 287 320 62 8 chr20 24074335 24074463 -48079419 - L2 LINE L2 -1 3271 3137 782 278 60 47 chr20 24074552 24074937 -48078945 - MLT1I LTR MaLR -17 392 3 219 278 70 61 chr20 24076253 24076368 -48077514 - MIR SINE MIR -30 232 117 275 239 71 80 chr20 24076992 24077105 -48076777 - MIR SINE MIR -65 143 32 1456 229 30 30 chr20 24077676 24078043 -48075839 + MLT1A2 LTR MaLR 1 367 -7 554 277 30 20 chr20 24078089 24078442 -48075440 + LTR16C LTR ERVL 87 491 0 2659 47 0 0 chr20 24078508 24078806 -48075076 - AluY SINE Alu -13 298 1 232 273 30 30 chr20 24079753 24079852 -48074030 + MIR SINE MIR 34 132 -130 428 321 109 0 chr20 24080464 24080657 -48073225 + MIR SINE MIR 48 261 -1 950 180 47 13 chr20 24080930 24081075 -48072807 - L1MA9 LINE L1 -7 6305 6148 192 40 0 0 chr20 24081075 24081100 -48072782 + (TG)n Simple_repeat Simple_repeat 2 26 0 950 180 47 13 chr20 24081100 24081187 -48072695 - L1MA9 LINE L1 -164 6148 6065 521 289 20 29 chr20 24081357 24081561 -48072321 + LTR16C LTR ERVL 290 491 0 296 329 22 7 chr20 24081561 24081698 -48072184 + MER117 DNA MER1_type 5 143 -54 1321 244 100 30 chr20 24082143 24082603 -48071279 - Charlie4a DNA MER1_type 0 508 17 549 258 202 12 chr20 24083024 24083276 -48070606 + L2 LINE L2 3014 3313 0 749 253 207 15 chr20 24083571 24084008 -48069874 - MLT1G LTR MaLR -2 588 46 233 304 0 45 chr20 24084018 24084130 -48069752 + MIR3 SINE MIR 7 113 -95 283 269 21 11 chr20 24085990 24086083 -48067799 - MER115 DNA AcHobo -446 247 154 207 139 0 0 chr20 24088296 24088332 -48065550 + (TCCC)n Simple_repeat Simple_repeat 1 36 0 684 189 91 0 chr20 24089214 24089357 -48064525 + MER3 DNA MER1_type 41 196 -13 778 154 96 0 chr20 24089970 24090158 -48063724 - L1MA7 LINE L1 0 6291 6086 1124 189 50 11 chr20 24090163 24090423 -48063459 + L1 LINE L1 4180 4449 -1697 501 316 92 14 chr20 24090789 24091007 -48062875 + MIR SINE MIR 5 239 -23 877 318 85 8 chr20 24091055 24091433 -48062449 + LTR16C LTR ERVL 68 474 -17 24 32 0 0 chr20 24091851 24091882 -48062000 + AT_rich Low_complexity Low_complexity 1 31 0 673 290 80 22 chr20 24092497 24092821 -48061061 - LTR16C LTR ERVL 0 491 149 330 298 240 0 chr20 24093470 24093641 -48060241 + MIR SINE MIR 50 261 -1 296 247 43 32 chr20 24144753 24144846 -48009036 - MER115 DNA AcHobo -446 247 154 207 139 0 0 chr20 24147066 24147102 -48006780 + (TCCC)n Simple_repeat Simple_repeat 1 36 0 709 136 106 8 chr20 24147984 24148116 -48005766 + MER3 DNA MER1_type 41 185 -24 831 154 96 0 chr20 24148739 24148927 -48004955 - L1MA7 LINE L1 0 6291 6086 1164 168 51 19 chr20 24148932 24149188 -48004694 + L1 LINE L1 4180 4443 -1703 519 315 93 14 chr20 24149560 24149776 -48004106 + MIR SINE MIR 5 237 -25 862 320 85 8 chr20 24149826 24150204 -48003678 + LTR16C LTR ERVL 68 474 -17 24 32 0 0 chr20 24150622 24150653 -48003229 + AT_rich Low_complexity Low_complexity 1 31 0 660 278 86 28 chr20 24151268 24151592 -48002290 - LTR16C LTR ERVL 0 491 149 368 298 240 0 chr20 24152241 24152412 -48001470 + MIR SINE MIR 50 261 -1 682 295 47 54 chr20 24152621 24152879 -48001003 + MIR SINE MIR 6 261 -1 375 301 49 87 chr20 24153065 24153331 -48000551 + L2 LINE L2 3016 3271 -1 21 0 0 0 chr20 24153765 24153786 -48000096 + AT_rich Low_complexity Low_complexity 1 21 0 232 194 0 60 chr20 24155109 24155176 -47998706 + L1MC4 LINE L1 6644 6706 -1336 322 306 117 15 chr20 24155271 24155477 -47998405 + L2 LINE L2 2367 2593 -721 23 0 0 0 chr20 24156028 24156051 -47997831 + AT_rich Low_complexity Low_complexity 1 23 0 330 297 22 0 chr20 24156440 24156531 -47997351 + MIR SINE MIR 54 146 -62 189 245 94 0 chr20 24157494 24157547 -47996335 - MIR SINE MIR -116 146 89 289 226 16 0 chr20 24157802 24157864 -47996018 - MIR SINE MIR -107 155 93 600 264 29 0 chr20 24157864 24158004 -47995878 - MIR SINE MIR -91 171 28 587 241 90 33 chr20 24158985 24159442 -47994440 - MLT1F LTR MaLR -2 593 1 358 285 74 55 chr20 24159476 24159803 -47994079 - L2 LINE L2 -282 2990 2654 189 0 0 0 chr20 24160360 24160381 -47993501 + (TTTTG)n Simple_repeat Simple_repeat 5 25 0 1849 124 22 7 chr20 24160381 24160655 -47993227 - AluSg SINE Alu -32 278 1 260 282 127 7 chr20 24160867 24161009 -47992873 + MER103 DNA DNA 8 166 0 1513 246 52 12 chr20 24161124 24161530 -47992352 - MLT1H LTR MaLR 0 549 128 1533 182 176 9 chr20 24161720 24162055 -47991827 - MSTD LTR MaLR 0 396 6 237 243 140 65 chr20 24162175 24162389 -47991493 - MER90 LTR ERV1 -4 610 381 7762 25 1 1 chr20 24162389 24163988 -47989894 + L1PA4 LINE L1 4554 6152 -3 2494 235 77 47 chr20 24164315 24165173 -47988709 + L1ME3A LINE L1 5239 6131 -39 2958 161 163 5 chr20 24165551 24166160 -47987722 - MER39 LTR ERV1 -2 705 1 183 284 11 91 chr20 24166160 24166248 -47987634 - MIR SINE MIR -105 103 23 225 204 37 19 chr20 24167530 24167584 -47986298 - L3b LINE CR1 -3 1580 1526 433 308 33 16 chr20 24168844 24169026 -47984856 + MIR SINE MIR 78 262 0 229 284 34 128 chr20 24169040 24169188 -47984694 - MIR SINE MIR -70 192 59 261 344 94 16 chr20 24169392 24169520 -47984362 - L2 LINE L2 -3 3269 3132 1001 301 29 29 chr20 24169788 24170200 -47983682 + MARNA DNA Mariner 11 422 -164 2510 68 0 0 chr20 24171828 24172139 -47981743 + AluY SINE Alu 1 311 0 209 288 34 0 chr20 24172577 24172636 -47981246 + L3 LINE CR1 1513 1573 -4 296 192 96 0 chr20 24172731 24172804 -47981078 + LTR16A1 LTR ERVL 216 295 -162 306 294 23 130 chr20 24172914 24173176 -47980706 + L2 LINE L2 2992 3225 -47 1117 258 22 6 chr20 24173182 24173500 -47980382 + L1ME1 LINE L1 5839 6161 -5 826 153 118 0 chr20 24174416 24174560 -47979322 - MLT1E3 LTR MaLR 0 624 464 * 1126 232 85 0 chr20 24174556 24174815 -47979067 - MLT1E3 LTR MaLR -343 281 1 * 1148 272 33 39 chr20 24174815 24175176 -47978706 - MLT1J1 LTR MaLR -38 408 50 339 309 63 57 chr20 24175366 24175452 -47978430 + MARNA DNA Mariner 241 325 -261 2057 138 0 0 chr20 24175452 24175764 -47978118 + AluSx SINE Alu 1 312 0 339 309 63 57 chr20 24175764 24176010 -47977872 + MARNA DNA Mariner 325 575 -11 183 204 0 0 chr20 24176489 24176538 -47977344 + (TG)n Simple_repeat Simple_repeat 2 50 0 853 270 59 22 chr20 24177150 24177420 -47976462 - L2 LINE L2 -2378 936 657 184 203 186 34 chr20 24178367 24178426 -47975456 + L2 LINE L2 523 590 -2724 662 136 8 0 chr20 24178947 24179065 -47974817 + CT-rich Low_complexity Low_complexity 2 120 0 299 356 0 0 chr20 24179132 24179250 -47974632 + (TG)n Simple_repeat Simple_repeat 1 118 0 760 238 55 42 chr20 24180033 24180344 -47973538 + MER33 DNA MER1_type 6 320 -4 395 348 24 18 chr20 24180443 24180607 -47973275 + MIR SINE MIR 71 235 -27 2239 137 14 14 chr20 24181825 24182190 -47971692 - MLT1A1 LTR MaLR 0 365 1 186 43 0 0 chr20 24182527 24182550 -47971332 + (A)n Simple_repeat Simple_repeat 1 23 0 802 249 83 0 chr20 24183229 24183422 -47970460 - MER63A DNA MER1_type 0 210 2 198 143 0 0 chr20 24183927 24183962 -47969920 + (TGGA)n Simple_repeat Simple_repeat 4 38 0 461 100 0 0 chr20 24184184 24184254 -47969628 - AluSx SINE Alu -4 307 238 2490 219 55 52 chr20 24184258 24185555 -47968327 - L1ME1 LINE L1 -12 6347 5039 554 204 21 49 chr20 24185824 24185966 -47967916 + MER63 DNA MER1_type 1 764 -298 617 300 25 50 chr20 24186045 24186362 -47967520 - LTR16C LTR ERVL -49 442 134 591 262 154 27 chr20 24187615 24187836 -47966046 - MIR SINE MIR 0 262 14 403 237 13 0 chr20 24190307 24190463 -47963419 + (CAT)n Simple_repeat Simple_repeat 1 158 0 1511 126 17 0 chr20 24190824 24191055 -47962827 - AluSx SINE Alu -77 235 1 414 299 177 7 chr20 24191371 24191603 -47962279 + LTR16A1 LTR ERVL 177 490 -1 383 344 65 23 chr20 24191764 24191979 -47961903 + MIR SINE MIR 15 238 -24 237 65 0 0 chr20 24191979 24192010 -47961872 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 199 261 22 0 chr20 24192023 24192069 -47961813 - L2 LINE L2 -39 3274 3228 195 250 66 26 chr20 24192082 24192158 -47961724 - L2 LINE L2 -367 2905 2827 411 284 29 0 chr20 24192178 24192280 -47961602 + Charlie8 DNA MER1_type 96 200 -2217 4701 116 49 40 chr20 24192822 24193623 -47960259 + L1PA15 LINE L1 5357 6164 -1 4824 168 47 4 chr20 24193720 24194729 -47959153 + L1MB3 LINE L1 5126 6180 -3 787 283 94 60 chr20 24195439 24195937 -47957945 + LTR33 LTR ERVL 7 521 0 1985 142 152 8 chr20 24195960 24196334 -47957548 - MSTA LTR MaLR 0 428 1 324 290 40 16 chr20 24196407 24196531 -47957351 + MER5A DNA MER1_type 41 167 -22 1240 221 37 0 chr20 24196535 24196834 -47957048 - Charlie4a DNA MER1_type -169 339 30 207 0 0 0 chr20 24196994 24197017 -47956865 + (GTGTG)n Simple_repeat Simple_repeat 3 25 0 367 233 70 0 chr20 24197042 24197128 -47956754 + MIR SINE MIR 47 138 -124 215 241 0 35 chr20 24197393 24197451 -47956431 + GA-rich Low_complexity Low_complexity 5 60 0 862 256 159 75 chr20 24197860 24198005 -47955877 - LTR16C LTR ERVL 0 491 360 1466 187 3 32 chr20 24198005 24198320 -47955562 + AluJo SINE Alu 1 306 -6 862 256 159 75 chr20 24198320 24198627 -47955255 - LTR16C LTR ERVL -131 360 1 23 33 0 0 chr20 24198830 24198860 -47955022 + AT_rich Low_complexity Low_complexity 1 30 0 502 285 158 26 chr20 24199431 24199869 -47954013 - MLT1L LTR MaLR -3 611 1 536 248 159 39 chr20 24200339 24200597 -47953285 - MLT1H LTR MaLR -13 536 248 258 281 104 73 chr20 24200638 24200802 -47953080 - MIR SINE MIR -40 222 54 1657 164 7 23 chr20 24200918 24201228 -47952654 + AluJb SINE Alu 1 305 -7 400 297 83 22 chr20 24201936 24202152 -47951730 + MIR SINE MIR 31 262 0 2221 84 0 3 chr20 24203005 24203302 -47950580 - AluY SINE Alu -12 299 4 398 329 66 9 chr20 24203679 24203907 -47949975 - L1MC4a LINE L1 -1923 5885 5645 303 261 100 15 chr20 24204088 24204218 -47949664 - MLT1K LTR MaLR -22 566 426 275 234 0 11 chr20 24204218 24204312 -47949570 + (TG)n Simple_repeat Simple_repeat 1 93 0 288 240 73 42 chr20 24204312 24204408 -47949474 - MLT1K LTR MaLR -160 428 330 362 299 91 18 chr20 24204960 24205181 -47948701 - MLT1L LTR MaLR -369 246 10 931 250 198 17 chr20 24205375 24205836 -47948046 - L2 LINE L2 0 3313 2770 25 0 0 0 chr20 24206699 24206724 -47947158 + AT_rich Low_complexity Low_complexity 1 25 0 511 135 0 103 chr20 24206851 24206977 -47946905 - MER5A DNA MER1_type -74 115 3 501 303 85 18 chr20 24207600 24207765 -47946117 - MIR SINE MIR -74 188 13 180 265 0 0 chr20 24208553 24208602 -47945280 + MIR SINE MIR 96 144 -64 377 200 13 0 chr20 24210404 24210479 -47943403 + Charlie8 DNA MER1_type 95 170 -2247 691 278 57 14 chr20 24213602 24213811 -47940071 + MIR SINE MIR 20 237 -25 1544 247 62 14 chr20 24215043 24215464 -47938418 - LTR16C LTR ERVL -8 483 43 247 362 73 26 chr20 24215652 24215884 -47937998 - MIR SINE MIR 0 262 20 686 38 0 0 chr20 24216056 24216136 -47937746 - MADE1 DNA Mariner 0 80 1 432 259 85 95 chr20 24217256 24217685 -47936197 - MLT1K LTR MaLR -16 572 134 1524 206 57 33 chr20 24217879 24218275 -47935607 - L1ME LINE L1 -483 5683 5283 2141 126 0 0 chr20 24218736 24219046 -47934836 - AluSx SINE Alu -2 310 1 461 277 119 17 chr20 24219402 24219579 -47934303 - MIR SINE MIR -2 260 66 436 226 0 0 chr20 24220482 24220566 -47933316 - L2 LINE L2 0 3313 3230 234 208 0 0 chr20 24220621 24220674 -47933208 + (TGGG)n Simple_repeat Simple_repeat 2 54 0 263 277 36 45 chr20 24220738 24220850 -47933032 - L2 LINE L2 -166 3147 3037 271 323 43 11 chr20 24221193 24221286 -47932596 + L2 LINE L2 3150 3245 -27 939 310 121 26 chr20 24221588 24222342 -47931540 - L2 LINE L2 -56 3257 2435 32 20 0 20 chr20 24223017 24223052 -47930830 + AT_rich Low_complexity Low_complexity 1 36 -13 1537 178 13 29 chr20 24223052 24223367 -47930515 + AluJo SINE Alu 2 311 -1 32 20 0 20 chr20 24223367 24223381 -47930501 + AT_rich Low_complexity Low_complexity 36 49 0 3870 128 23 3 chr20 24223395 24224011 -47929871 - L1MA4A LINE L1 -14 6289 5662 28 0 0 0 chr20 24224822 24224850 -47929032 + AT_rich Low_complexity Low_complexity 1 28 0 231 36 0 0 chr20 24224856 24224884 -47928998 + (CA)n Simple_repeat Simple_repeat 2 29 0 24 0 0 0 chr20 24224905 24224929 -47928953 + AT_rich Low_complexity Low_complexity 1 24 0 725 277 20 15 chr20 24224983 24225178 -47928704 - MIR SINE MIR -57 205 10 1656 180 0 7 chr20 24226622 24226911 -47926971 - AluJo SINE Alu -25 287 1 775 289 5 0 chr20 24226930 24227117 -47926765 + MIR SINE MIR 29 216 -46 2219 88 0 3 chr20 24227841 24228136 -47925746 + AluSq SINE Alu 1 294 -19 404 313 60 0 chr20 24228161 24228295 -47925587 - MIR SINE MIR -8 254 113 192 221 47 81 chr20 24228480 24228566 -47925316 - MIR SINE MIR -174 88 6 511 289 71 49 chr20 24229994 24230402 -47923480 - L2 LINE L2 -25 3288 2872 268 319 28 14 chr20 24232676 24232817 -47921065 - MIR3 SINE MIR -15 193 51 215 297 60 115 chr20 24233816 24234085 -47919797 + L2 LINE L2 2813 3066 -206 1726 57 18 9 chr20 24235353 24235582 -47918300 - L1PA8 LINE L1 -2 6170 5940 331 267 17 17 chr20 24236059 24236175 -47917707 + CT-rich Low_complexity Low_complexity 2 117 0 1450 296 59 2 chr20 24236479 24236938 -47916944 - LTR16C LTR ERVL -6 485 1 224 309 0 15 chr20 24237619 24237687 -47916195 - L3 LINE CR1 -13 1564 1498 540 276 167 72 chr20 24237693 24238249 -47915633 + L2 LINE L2 1829 2331 -982 1429 174 4 25 chr20 24238249 24238524 -47915358 + L1MA5 LINE L1 6032 6300 0 540 276 167 72 chr20 24238524 24238558 -47915324 + L2 LINE L2 2331 2360 -953 306 0 0 0 chr20 24238558 24238592 -47915290 + (TG)n Simple_repeat Simple_repeat 2 35 0 540 276 167 72 chr20 24238592 24239269 -47914613 + L2 LINE L2 2360 3268 -45 237 330 52 40 chr20 24239342 24239515 -47914367 - L3 LINE CR1 -127 1450 1276 293 278 22 0 chr20 24239920 24240010 -47913872 - L3 LINE CR1 -804 773 682 863 279 8 20 chr20 24240077 24240328 -47913554 + MIR SINE MIR 14 261 -1 248 205 18 0 chr20 24241188 24241253 -47912629 - LTR16B LTR ERVL 0 452 385 2421 138 3 0 chr20 24241262 24241616 -47912266 - MSTA LTR MaLR 0 428 74 1548 173 36 53 chr20 24241598 24242013 -47911869 + MLT2B3 LTR ERVL 153 554 0 * 489 310 134 21 chr20 24242013 24242340 -47911542 - LTR16A LTR ERVL -85 365 2 232 229 0 0 chr20 24242943 24242991 -47910891 - L2 LINE L2 -72 3241 3194 524 237 12 64 chr20 24244137 24244177 -47909705 + MIR SINE MIR 36 77 -185 2266 139 18 18 chr20 24244177 24244565 -47909317 - MLT1B LTR MaLR -2 388 1 524 237 12 64 chr20 24244565 24244697 -47909185 + MIR SINE MIR 77 199 -63 631 279 155 62 chr20 24245011 24245541 -47908341 + MLT1G LTR MaLR 12 590 0 300 274 153 45 chr20 24247546 24247703 -47906179 - MER5A DNA MER1_type 0 189 16 2361 160 54 5 chr20 24248653 24249059 -47904823 - MSTB LTR MaLR 0 426 1 1039 174 31 5 chr20 24249477 24249673 -47904209 - MER3 DNA MER1_type -4 205 5 276 219 8 84 chr20 24250344 24250463 -47903419 - MLT1H LTR MaLR 0 542 433 507 307 30 15 chr20 24250478 24250680 -47903202 - MLT1H LTR MaLR -292 257 53 767 247 95 19 chr20 24250793 24251192 -47902690 - MLT1H LTR MaLR -2 547 26 25 0 0 0 chr20 24252020 24252045 -47901837 + AT_rich Low_complexity Low_complexity 1 25 0 201 263 0 0 chr20 24252200 24252257 -47901625 - MIR SINE MIR -109 153 97 2317 92 0 25 chr20 24253866 24254183 -47899699 + AluSc SINE Alu 1 309 0 522 276 30 20 chr20 24254253 24254473 -47899409 + L1M3d LINE L1 -719 565 -5738 344 348 11 45 chr20 24254461 24254639 -47899243 + L1M3d LINE L1 922 1093 -5210 * 3287 234 29 47 chr20 24254774 24256012 -47897870 + L1M3d LINE L1 794 1896 -4488 1494 148 54 64 chr20 24257016 24257314 -47896568 + AluJb SINE Alu 5 299 -13 549 214 0 0 chr20 24257413 24257511 -47896371 - Tigger5 DNA MER2_type -1 2322 2225 * 1207 194 33 0 chr20 24257507 24257718 -47896164 - Tigger5 DNA MER2_type -2104 219 2 336 94 0 0 chr20 24257725 24257778 -47896104 + (TG)n Simple_repeat Simple_repeat 2 54 0 288 281 39 59 chr20 24257817 24257970 -47895912 + MIR SINE MIR 40 189 -73 2045 187 105 7 chr20 24258173 24258600 -47895282 - MLT1D LTR MaLR 0 505 37 316 209 14 135 chr20 24259038 24259081 -47894801 + MIR SINE MIR 124 171 -91 2118 160 12 45 chr20 24259081 24259318 -47894564 - MLT1B LTR MaLR -4 386 166 2879 7 0 0 chr20 24259318 24259624 -47894258 + AluYa5 SINE Alu 1 306 -5 2118 160 12 45 chr20 24259624 24259785 -47894097 - MLT1B LTR MaLR -224 166 1 316 209 14 135 chr20 24259785 24259889 -47893993 + MIR SINE MIR 171 253 -9 1484 182 138 50 chr20 24260395 24260850 -47893032 + L1ME2 LINE L1 5670 6164 0 2540 221 43 14 chr20 24261416 24261809 -47892073 - MLT1G LTR MaLR -5 585 169 2431 64 0 0 chr20 24261809 24262119 -47891763 + AluY SINE Alu 1 310 0 2540 221 43 14 chr20 24262119 24262284 -47891598 - MLT1G LTR MaLR -421 169 10 225 288 0 15 chr20 24262548 24262614 -47891268 + HAL1 LINE L1 745 809 -1698 286 254 63 58 chr20 24262731 24262920 -47890962 + HAL1 LINE L1 851 1040 -1467 2109 117 3 13 chr20 24262966 24263264 -47890618 + AluSx SINE Alu 1 295 -17 295 279 30 77 chr20 24263542 24263775 -47890107 + HAL1b LINE L1 678 899 -449 1729 95 15 5 chr20 24263904 24264165 -47889717 - L1PA8 LINE L1 0 6172 5862 350 288 72 40 chr20 24264163 24264385 -47889497 + HAL1 LINE L1 2255 2483 -24 * 711 199 23 27 chr20 24264522 24264700 -47889182 - MIR SINE MIR -26 236 62 1241 134 6 0 chr20 24264700 24264879 -47889003 - LTR12 LTR ERV1 -158 556 377 287 245 31 20 chr20 24264880 24264978 -47888904 - LTR30 LTR ERV1 -80 642 544 5711 111 50 66 chr20 24264978 24266151 -47887731 - pTR5 LTR ERV1 -413 2025 741 1924 137 0 0 chr20 24266434 24266705 -47887177 + AluSx SINE Alu 17 287 -25 682 249 117 19 chr20 24267026 24267291 -47886591 + MLT1G LTR MaLR 127 417 -173 24 0 0 0 chr20 24267350 24267374 -47886508 + AT_rich Low_complexity Low_complexity 1 24 0 855 185 23 12 chr20 24267603 24267776 -47886106 + MER5B DNA MER1_type 1 175 -3 273 186 47 58 chr20 24267776 24267862 -47886020 - MER5A DNA MER1_type -65 124 40 360 244 197 0 chr20 24267970 24268097 -47885785 + MIR SINE MIR 108 259 -3 356 215 13 0 chr20 24270329 24270408 -47883474 - MER5A DNA MER1_type -80 109 30 1086 236 103 29 chr20 24270810 24271255 -47882627 + Charlie4a DNA MER1_type 29 506 -2 264 161 48 32 chr20 24271558 24271620 -47882262 - Charlie8 DNA MER1_type -2253 164 102 1801 175 0 7 chr20 24271722 24272019 -47881863 + AluJb SINE Alu 1 295 -17 445 183 53 154 chr20 24272196 24272404 -47881478 - MER53 DNA DNA 0 189 3 843 243 37 8 chr20 24272521 24272764 -47881118 - L1ME3A LINE L1 -8 6162 5913 240 35 0 0 chr20 24272792 24272821 -47881061 + (TG)n Simple_repeat Simple_repeat 2 30 0 1562 225 116 17 chr20 24272904 24273309 -47880573 + LTR16C LTR ERVL 43 487 -4 256 282 56 0 chr20 24273345 24273416 -47880466 - L2 LINE L2 -3 3310 3236 247 287 84 49 chr20 24275709 24275852 -47878030 + MIR SINE MIR 2 149 -113 2575 262 78 58 chr20 24276322 24277322 -47876560 - HAL1 LINE L1 -3 2504 1525 360 64 0 0 chr20 24277322 24277369 -47876513 + (TA)n Simple_repeat Simple_repeat 2 48 0 2575 262 78 58 chr20 24277369 24277528 -47876354 - HAL1 LINE L1 -982 1525 1371 2466 67 0 7 chr20 24277528 24277828 -47876054 + AluY SINE Alu 1 298 -13 2575 262 78 58 chr20 24277828 24277936 -47875946 - HAL1 LINE L1 -1136 1371 1211 255 380 73 0 chr20 24277915 24278065 -47875817 - HAL1 LINE L1 -2044 463 303 * 561 264 51 17 chr20 24278068 24278246 -47875636 - HAL1 LINE L1 -2323 184 1 703 270 85 31 chr20 24279570 24279863 -47874019 + LTR16B LTR ERVL 154 462 -2 2124 115 3 0 chr20 24280592 24280897 -47872985 - AluSx SINE Alu -6 306 1 368 293 25 96 chr20 24281368 24281431 -47872451 + MIR3 SINE MIR 20 86 -122 2500 181 77 4 chr20 24281431 24281912 -47871970 + MLT2B1 LTR ERVL 5 520 0 368 293 25 96 chr20 24281912 24282005 -47871877 + MIR3 SINE MIR 86 165 -43 236 220 34 127 chr20 24283262 24283380 -47870502 + MER5A DNA MER1_type 83 189 0 * 348 212 0 127 chr20 24283277 24283395 -47870487 - MER5A DNA MER1_type -84 105 3 549 227 87 13 chr20 24285325 24285475 -47868407 + MER3 DNA MER1_type 1 161 -48 201 316 71 20 chr20 24285536 24285634 -47868248 - MIR SINE MIR -74 188 86 3937 127 0 3 chr20 24286087 24286668 -47867214 - L1PB3 LINE L1 0 6154 5576 833 214 6 0 chr20 24289029 24289188 -47864694 - FRAM SINE Alu -22 154 1 274 344 86 8 chr20 24290879 24291007 -47862875 + MIR3 SINE MIR 21 158 -50 882 271 106 11 chr20 24291034 24291411 -47862471 - MER113 DNA MER1_type? -43 478 66 360 0 0 0 chr20 24291787 24291827 -47862055 + (TG)n Simple_repeat Simple_repeat 2 41 0 2219 80 0 30 chr20 24292219 24292519 -47861363 + AluY SINE Alu 1 291 -20 671 81 0 0 chr20 24292697 24292784 -47861098 + AluS SINE Alu 2 88 -224 364 231 131 15 chr20 24294824 24294954 -47858928 - MLT1J LTR MaLR -169 342 198 306 291 76 52 chr20 24294944 24295154 -47858728 - MLT1L LTR MaLR -367 248 34 * 2095 125 0 0 chr20 24295214 24295518 -47858364 + AluSx SINE Alu 1 304 -8 398 254 85 32 chr20 24297097 24297286 -47856596 - L2 LINE L2 -208 3064 2866 219 103 0 0 chr20 24297631 24297670 -47856212 + (T)n Simple_repeat Simple_repeat 1 39 0 895 294 136 26 chr20 24297716 24298251 -47855631 - L2 LINE L2 -991 2323 1730 375 268 35 102 chr20 24298257 24298348 -47855534 - L1ME4a LINE L1 -229 5892 5796 1439 187 3 11 chr20 24298348 24298631 -47855251 - AluJo SINE Alu -31 281 1 375 268 35 102 chr20 24298631 24298823 -47855059 - L1ME4a LINE L1 -325 5796 5625 1334 190 105 5 chr20 24300228 24300705 -47853177 - MLT1F1 LTR MaLR -1 566 3 2186 93 17 0 chr20 24300766 24301067 -47852815 + AluSx SINE Alu 2 307 -5 353 309 10 0 chr20 24302883 24302980 -47850902 + MIR SINE MIR 65 162 -100 761 200 8 0 chr20 24303174 24303304 -47850578 + FLAM_A SINE Alu 2 132 -1 392 280 82 22 chr20 24303449 24303631 -47850251 - L1MC5 LINE L1 -52 7909 7717 264 59 0 0 chr20 24303667 24303701 -47850181 + (T)n Simple_repeat Simple_repeat 1 34 0 6390 58 15 49 chr20 24303703 24305554 -47848328 - SVA Other Other -551 1383 1 263 96 19 0 chr20 24305554 24305606 -47848276 + (GGGAGA)n Simple_repeat Simple_repeat 2 54 0 356 192 56 32 chr20 24305627 24305752 -47848130 - L1MC5 LINE L1 -254 7707 7580 192 125 0 0 chr20 24305842 24305874 -47848008 + (TG)n Simple_repeat Simple_repeat 1 32 0 188 86 29 0 chr20 24305991 24306026 -47847856 + (TG)n Simple_repeat Simple_repeat 1 36 0 782 126 0 6 chr20 24306040 24306199 -47847683 + (TG)n Simple_repeat Simple_repeat 1 158 0 406 171 8 114 chr20 24306452 24306575 -47847307 - L1MC5 LINE L1 -698 7263 7154 1555 158 4 7 chr20 24307998 24308276 -47845606 + AluSx SINE Alu 33 309 -3 313 227 64 22 chr20 24308520 24308653 -47845229 + MIR SINE MIR 7 150 -63 230 159 23 0 chr20 24309890 24309934 -47843948 + GA-rich Low_complexity Low_complexity 1 45 0 360 189 0 31 chr20 24309936 24310063 -47843819 + (TGGA)n Simple_repeat Simple_repeat 1 123 0 228 266 0 0 chr20 24311265 24311329 -47842553 + GA-rich Low_complexity Low_complexity 2 65 0 2968 176 2 6 chr20 24311596 24312095 -47841787 - LOR1a LTR ERV1 0 497 1 823 214 254 25 chr20 24313005 24313398 -47840484 - MLT1E3 LTR MaLR -3 621 139 419 142 18 124 chr20 24314154 24314267 -47839615 - MER5A DNA MER1_type -83 106 6 383 259 36 18 chr20 24314852 24315018 -47838864 + (TA)n Simple_repeat Simple_repeat 1 169 0 331 261 210 25 chr20 24315087 24315244 -47838638 + L1ME4a LINE L1 5934 6119 -2 433 244 23 69 chr20 24315468 24315599 -47838283 + L2 LINE L2 3189 3313 0 1882 117 0 11 chr20 24315740 24316014 -47837868 + AluSx SINE Alu 1 271 -41 682 286 167 24 chr20 24316978 24317738 -47836144 - L2 LINE L2 -17 3296 2432 574 255 48 7 chr20 24317771 24317916 -47835966 - MIR SINE MIR -64 198 48 23 54 0 0 chr20 24318084 24318121 -47835761 + AT_rich Low_complexity Low_complexity 1 37 0 1801 220 112 10 chr20 24318159 24318658 -47835224 + L1ME2 LINE L1 5538 6087 -77 465 268 170 78 chr20 24319488 24319965 -47833917 - MLT1H LTR MaLR 0 549 29 250 313 30 20 chr20 24319982 24320081 -47833801 + MIR3 SINE MIR 109 208 0 676 179 19 51 chr20 24321489 24321645 -47832237 - L1PB4 LINE L1 0 6156 6006 767 212 0 0 chr20 24321738 24321884 -47831998 - L1PB4 LINE L1 -154 6002 5857 1798 179 0 3 chr20 24321983 24322296 -47831586 - AluJo SINE Alu 0 312 1 675 167 7 13 chr20 24322910 24323060 -47830822 + GA-rich Low_complexity Low_complexity 1 149 0 400 290 7 65 chr20 24323328 24323483 -47830399 - MIR SINE MIR -58 204 59 2639 118 39 5 chr20 24323876 24324290 -47829592 - MSTA LTR MaLR 0 428 1 1633 234 9 0 chr20 24324845 24325182 -47828700 - MER58B DNA MER1_type 0 341 2 637 279 146 25 chr20 24325559 24325874 -47828008 - MER68 LTR ERV1 -13 549 197 225 313 47 60 chr20 24325937 24326087 -47827795 - MER77 LTR ERV1 -444 161 14 500 313 90 40 chr20 24326118 24326495 -47827387 - MLT1J2 LTR MaLR -2 448 53 237 95 48 24 chr20 24326497 24326539 -47827343 + MER3 DNA MER1_type 160 202 -7 550 271 175 10 chr20 24326558 24326872 -47827010 - L1ME4a LINE L1 -77 6044 5679 21 36 0 0 chr20 24327324 24327352 -47826530 + AT_rich Low_complexity Low_complexity 1 28 0 454 191 0 0 chr20 24328728 24328812 -47825070 - L1ME4a LINE L1 -1163 4983 4900 346 312 24 32 chr20 24329996 24330121 -47823761 + L2 LINE L2 3136 3259 -13 519 69 0 0 chr20 24330121 24330193 -47823689 + (TGGA)n Simple_repeat Simple_repeat 1 72 0 324 351 9 0 chr20 24330270 24330384 -47823498 - MIR SINE MIR 0 262 148 * 497 275 75 58 chr20 24330376 24330763 -47823119 - L2 LINE L2 -2 3311 2911 244 208 222 0 chr20 24330871 24330943 -47822939 - MIR SINE MIR -110 152 65 340 268 72 14 chr20 24332176 24332314 -47821568 - L2 LINE L2 0 3313 3168 984 319 210 15 chr20 24333424 24334139 -47819743 - L2 LINE L2 -508 2806 1953 242 259 301 12 chr20 24334160 24334326 -47819556 + L2 LINE L2 3015 3228 -44 636 237 15 0 chr20 24334494 24334625 -47819257 - MER63A DNA MER1_type 0 210 78 866 264 71 19 chr20 24334919 24335230 -47818652 - LTR16C LTR ERVL -6 485 159 1417 124 0 0 chr20 24335406 24335608 -47818274 + AluSg/x SINE Alu 92 293 -19 429 327 18 60 chr20 24335690 24335911 -47817971 + MIR SINE MIR 1 214 -48 667 197 14 27 chr20 24336727 24336874 -47817008 + L1ME2 LINE L1 6019 6163 -1 428 268 3 0 chr20 24337041 24337402 -47816480 + (CA)n Simple_repeat Simple_repeat 1 362 0 231 311 0 0 chr20 24337428 24337589 -47816293 + (CA)n Simple_repeat Simple_repeat 1 161 0 2085 121 3 0 chr20 24337615 24337913 -47815969 - AluSc SINE Alu -10 299 1 1487 215 0 13 chr20 24337924 24338226 -47815656 - AluJb SINE Alu -14 298 1 724 271 69 2 chr20 24338677 24339080 -47814802 + L1ME2 LINE L1 5699 6143 -21 296 304 134 18 chr20 24339510 24339622 -47814260 - L2 LINE L2 -2 3270 3146 750 274 26 13 chr20 24339686 24339916 -47813966 - MIR SINE MIR -12 250 18 851 240 29 0 chr20 24339918 24340093 -47813789 - MER58A DNA MER1_type 0 224 45 1865 157 0 7 chr20 24340096 24340402 -47813480 + AluJo SINE Alu 1 304 -8 1023 160 44 0 chr20 24342000 24342181 -47811701 - MER5A DNA MER1_type 0 189 1 846 225 24 29 chr20 24342315 24342524 -47811358 - MER3 DNA MER1_type 0 209 2 1523 159 38 0 chr20 24342597 24342861 -47811021 + AluJb SINE Alu 21 294 -18 297 333 54 50 chr20 24344396 24344618 -47809264 - MIR SINE MIR -35 227 5 2824 253 148 93 chr20 24344689 24346077 -47807805 - L2 LINE L2 -926 2388 723 371 216 270 0 chr20 24346077 24346225 -47807657 + MER3 DNA MER1_type 1 188 -21 2824 253 148 93 chr20 24346225 24346637 -47807245 - L2 LINE L2 -2591 723 335 1595 51 0 0 chr20 24350804 24351000 -47802882 + AluY SINE Alu 96 291 -20 186 43 0 0 chr20 24351266 24351289 -47802593 + (CA)n Simple_repeat Simple_repeat 1 23 0 480 287 132 0 chr20 24352561 24352728 -47801154 - MER5A DNA MER1_type 0 189 1 1828 145 3 0 chr20 24353855 24354138 -47799744 + AluJo SINE Alu 21 304 -8 1735 155 3 19 chr20 24354309 24354619 -47799263 + AluJb SINE Alu 1 305 -7 2179 118 36 33 chr20 24354936 24355299 -47798583 + THE1B LTR MaLR 1 364 0 2123 98 3 0 chr20 24355351 24355646 -47798236 - AluSp SINE Alu -17 296 1 356 87 0 0 chr20 24356423 24356469 -47797413 - AluJb SINE Alu -137 165 120 5555 102 35 36 chr20 24357599 24358122 -47795760 - L1MA3 LINE L1 0 6305 5782 2247 99 3 0 chr20 24358122 24358426 -47795456 - AluSg1 SINE Alu -4 305 1 5555 102 35 36 chr20 24358426 24358836 -47795046 - L1MA3 LINE L1 -523 5782 5373 904 113 0 103 chr20 24359244 24359429 -47794453 - AluSg/x SINE Alu -7 305 140 27 0 0 0 chr20 24359854 24359881 -47794001 + AT_rich Low_complexity Low_complexity 1 27 0 454 226 32 75 chr20 24360045 24360231 -47793651 + MER5B DNA MER1_type 1 178 0 198 0 0 0 chr20 24360353 24360375 -47793507 + (GA)n Simple_repeat Simple_repeat 1 22 0 922 251 0 9 chr20 24360400 24360611 -47793271 + MER3 DNA MER1_type 1 209 0 699 165 152 43 chr20 24360745 24360909 -47792973 + MER5A DNA MER1_type 1 182 -7 2351 69 0 7 chr20 24362144 24362447 -47791435 - AluSc SINE Alu -8 301 1 1615 186 0 17 chr20 24362479 24362780 -47791102 + AluJo SINE Alu 17 312 0 733 256 70 64 chr20 24362840 24363261 -47790621 - LTR37B LTR ERV1 0 468 42 192 77 0 0 chr20 24363261 24363287 -47790595 + (CCCTAA)n Simple_repeat Simple_repeat 3 28 0 733 256 70 64 chr20 24363287 24363319 -47790563 - LTR37B LTR ERV1 -426 42 12 1810 190 47 49 chr20 24364281 24364469 -47789413 + MLT1C LTR MaLR 1 188 -279 2136 115 0 0 chr20 24364469 24364794 -47789088 + AluSq SINE Alu 1 313 0 1810 190 47 49 chr20 24364794 24365073 -47788809 + MLT1C LTR MaLR 188 467 0 545 275 187 37 chr20 24367035 24367522 -47786360 + HAL1 LINE L1 1362 1921 -586 276 100 0 0 chr20 24367603 24367643 -47786239 + (GGAA)n Simple_repeat Simple_repeat 3 42 0 707 238 14 0 chr20 24368461 24368604 -47785278 + MER5B DNA MER1_type 10 154 -24 212 328 98 46 chr20 24368631 24368805 -47785077 + MER5A DNA MER1_type 7 189 0 685 226 62 43 chr20 24369418 24369636 -47784246 + MLT1E LTR MaLR 65 394 -260 1753 242 16 18 chr20 24369636 24370083 -47783799 + MER89 LTR ERV1 1 446 -113 361 326 54 0 chr20 24370087 24370216 -47783666 - L2 LINE L2 -1390 1924 1789 984 200 14 73 chr20 24370264 24370313 -47783569 - MER58A DNA MER1_type -2213 207 157 2045 124 3 3 chr20 24370313 24370612 -47783270 - AluSx SINE Alu -13 299 1 2910 152 29 34 chr20 24370621 24371180 -47782702 - MER74A LTR ERVL -2 556 1 984 200 14 73 chr20 24371180 24371340 -47782542 - MER58A DNA MER1_type -2271 149 1 615 310 112 55 chr20 24371400 24371661 -47782221 + HAL1b LINE L1 221 466 -882 1017 221 110 86 chr20 24371661 24372196 -47781686 - MLT1H LTR MaLR -1 548 1 615 310 112 55 chr20 24372196 24372499 -47781383 + HAL1b LINE L1 466 817 -531 1255 161 97 24 chr20 24372877 24373212 -47780670 - MSTD LTR MaLR 0 396 1 198 298 49 71 chr20 24373473 24373698 -47780184 + L2 LINE L2 2526 2745 -569 761 313 92 29 chr20 24373722 24374137 -47779745 + L2 LINE L2 2871 3311 -2 2050 112 7 16 chr20 24374139 24374442 -47779440 + AluSc SINE Alu 3 302 -7 237 239 31 69 chr20 24374616 24374775 -47779107 + L1M4 LINE L1 2205 2357 -3789 484 284 44 108 chr20 24375200 24375450 -47778432 + L1M4 LINE L1 2678 2911 -3235 3372 151 71 3 chr20 24375503 24376081 -47777801 + MER41B LTR ERV1 17 633 -2 24 0 0 0 chr20 24376114 24376138 -47777744 + AT_rich Low_complexity Low_complexity 1 24 0 1864 149 7 0 chr20 24376172 24376467 -47777415 + AluJb SINE Alu 2 298 -14 180 0 0 0 chr20 24376894 24376914 -47776968 + (GGAGA)n Simple_repeat Simple_repeat 2 21 0 712 185 23 52 chr20 24377249 24377422 -47776460 + L2 LINE L2 3144 3311 -2 669 256 104 15 chr20 24377727 24377997 -47775885 + L2 LINE L2 2467 2760 -554 1433 152 126 82 chr20 24378024 24378453 -47775429 - LTR7 LTR ERV1 -2 448 1 2537 79 45 13 chr20 24378453 24378831 -47775051 - HERVH LTR ERV1 0 7713 7324 381 118 105 53 chr20 24378831 24378907 -47774975 - HERVH LTR ERV1 -1894 5819 5740 * 2963 110 7 2 chr20 24378894 24379331 -47774551 - HERVH LTR ERV1 -3783 3930 3492 866 162 20 0 chr20 24379321 24379469 -47774413 - HERVH LTR ERV1 -4423 3290 3140 * 13845 89 55 5 chr20 24379463 24382317 -47771565 - HERVH LTR ERV1 -4726 2987 1 1526 152 126 82 chr20 24382319 24382748 -47771134 - LTR7 LTR ERV1 -2 448 1 358 285 57 0 chr20 24382897 24383020 -47770862 + L2 LINE L2 3141 3270 -2 346 312 24 32 chr20 24434403 24434528 -47719354 + L2 LINE L2 3136 3259 -13 519 69 0 0 chr20 24434528 24434600 -47719282 + (TGGA)n Simple_repeat Simple_repeat 1 72 0 324 351 9 0 chr20 24434677 24434791 -47719091 - MIR SINE MIR 0 262 148 * 481 279 111 75 chr20 24434783 24435170 -47718712 - L2 LINE L2 -2 3311 2911 244 208 222 0 chr20 24435278 24435350 -47718532 - MIR SINE MIR -110 152 65 399 264 57 14 chr20 24436583 24436723 -47717159 - L2 LINE L2 0 3313 3168 984 319 210 15 chr20 24437833 24438548 -47715334 - L2 LINE L2 -508 2806 1953 242 259 301 12 chr20 24438569 24438735 -47715147 + L2 LINE L2 3015 3228 -44 636 237 15 0 chr20 24438903 24439034 -47714848 - MER63A DNA MER1_type 0 210 78 866 264 71 19 chr20 24439328 24439639 -47714243 - LTR16C LTR ERVL -6 485 159 1417 124 0 0 chr20 24439815 24440017 -47713865 + AluSg/x SINE Alu 92 293 -19 429 327 18 60 chr20 24440099 24440320 -47713562 + MIR SINE MIR 1 214 -48 667 197 14 27 chr20 24441136 24441283 -47712599 + L1ME2 LINE L1 6019 6163 -1 428 268 3 0 chr20 24441450 24441811 -47712071 + (CA)n Simple_repeat Simple_repeat 1 362 0 231 311 0 0 chr20 24441837 24441998 -47711884 + (CA)n Simple_repeat Simple_repeat 1 161 0 2085 121 3 0 chr20 24442024 24442322 -47711560 - AluSc SINE Alu -10 299 1 1487 215 0 13 chr20 24442333 24442635 -47711247 - AluJb SINE Alu -14 298 1 724 271 69 2 chr20 24443086 24443489 -47710393 + L1ME2 LINE L1 5699 6143 -21 296 304 134 18 chr20 24443919 24444031 -47709851 - L2 LINE L2 -2 3270 3146 750 274 26 13 chr20 24444095 24444325 -47709557 - MIR SINE MIR -12 250 18 851 240 29 0 chr20 24444327 24444502 -47709380 - MER58A DNA MER1_type 0 224 45 1877 159 0 6 chr20 24444505 24444819 -47709063 + AluJo SINE Alu 1 312 0 1023 160 44 0 chr20 24446409 24446590 -47707292 - MER5A DNA MER1_type 0 189 1 846 225 24 29 chr20 24446724 24446933 -47706949 - MER3 DNA MER1_type 0 209 2 1523 159 38 0 chr20 24447006 24447270 -47706612 + AluJb SINE Alu 21 294 -18 297 333 54 50 chr20 24448806 24449028 -47704854 - MIR SINE MIR -35 227 5 2824 253 148 93 chr20 24449099 24450487 -47703395 - L2 LINE L2 -926 2388 723 371 216 270 0 chr20 24450487 24450635 -47703247 + MER3 DNA MER1_type 1 188 -21 2824 253 148 93 chr20 24450635 24451047 -47702835 - L2 LINE L2 -2591 723 335 1595 51 0 0 chr20 24455214 24455410 -47698472 + AluY SINE Alu 96 291 -20 186 43 0 0 chr20 24455676 24455699 -47698183 + (CA)n Simple_repeat Simple_repeat 1 23 0 480 287 132 0 chr20 24456971 24457138 -47696744 - MER5A DNA MER1_type 0 189 1 1828 145 3 0 chr20 24458265 24458548 -47695334 + AluJo SINE Alu 21 304 -8 1735 155 3 19 chr20 24458719 24459029 -47694853 + AluJb SINE Alu 1 305 -7 2179 118 36 33 chr20 24459346 24459709 -47694173 + THE1B LTR MaLR 1 364 0 2123 98 3 0 chr20 24459761 24460056 -47693826 - AluSp SINE Alu -17 296 1 356 87 0 0 chr20 24460833 24460879 -47693003 - AluJb SINE Alu -137 165 120 5555 102 35 36 chr20 24462009 24462532 -47691350 - L1MA3 LINE L1 0 6305 5782 2247 99 3 0 chr20 24462532 24462836 -47691046 - AluSg1 SINE Alu -4 305 1 5555 102 35 36 chr20 24462836 24463246 -47690636 - L1MA3 LINE L1 -523 5782 5373 892 124 0 102 chr20 24463654 24463840 -47690042 - AluSg/x SINE Alu -6 306 140 27 0 0 0 chr20 24464265 24464292 -47689590 + AT_rich Low_complexity Low_complexity 1 27 0 466 220 32 75 chr20 24464456 24464642 -47689240 + MER5B DNA MER1_type 1 178 0 180 0 0 0 chr20 24464764 24464784 -47689098 + (GA)n Simple_repeat Simple_repeat 1 20 0 922 251 0 9 chr20 24464809 24465020 -47688862 + MER3 DNA MER1_type 1 209 0 699 165 152 43 chr20 24465154 24465318 -47688564 + MER5A DNA MER1_type 1 182 -7 2293 74 0 7 chr20 24466552 24466849 -47687033 - AluSc SINE Alu -14 295 1 1628 195 0 16 chr20 24466869 24467182 -47686700 + AluJo SINE Alu 5 312 0 720 266 66 60 chr20 24467242 24467663 -47686219 - LTR37B LTR ERV1 0 468 42 192 77 0 0 chr20 24467663 24467689 -47686193 + (CCCTAA)n Simple_repeat Simple_repeat 3 28 0 720 266 66 60 chr20 24467689 24467721 -47686161 - LTR37B LTR ERV1 -426 42 12 1810 190 47 49 chr20 24468680 24468868 -47685014 + MLT1C LTR MaLR 1 188 -279 2122 118 0 0 chr20 24468868 24469193 -47684689 + AluSq SINE Alu 1 313 0 1810 190 47 49 chr20 24469193 24469472 -47684410 + MLT1C LTR MaLR 188 467 0 553 275 187 37 chr20 24471434 24471921 -47681961 + HAL1 LINE L1 1362 1921 -586 255 125 0 0 chr20 24472002 24472042 -47681840 + (GGAA)n Simple_repeat Simple_repeat 3 42 0 707 238 14 0 chr20 24472860 24473003 -47680879 + MER5B DNA MER1_type 10 154 -24 217 316 115 63 chr20 24473030 24473204 -47680678 + MER5A DNA MER1_type 7 189 0 695 223 82 55 chr20 24473817 24474035 -47679847 + MLT1E LTR MaLR 65 288 -305 1753 242 16 18 chr20 24474035 24474482 -47679400 + MER89 LTR ERV1 1 446 -113 361 326 54 0 chr20 24474486 24474615 -47679267 - L2 LINE L2 -1390 1924 1789 984 200 14 73 chr20 24474663 24474712 -47679170 - MER58A DNA MER1_type -2213 207 157 2060 120 3 3 chr20 24474712 24475011 -47678871 - AluSx SINE Alu -13 299 1 2910 152 29 34 chr20 24475020 24475579 -47678303 - MER74A LTR ERVL -2 556 1 984 200 14 73 chr20 24475579 24475739 -47678143 - MER58A DNA MER1_type -2271 149 1 615 310 112 55 chr20 24475799 24476060 -47677822 + HAL1b LINE L1 221 466 -882 991 224 112 88 chr20 24476060 24476595 -47677287 - MLT1H LTR MaLR -1 548 1 615 310 112 55 chr20 24476595 24476898 -47676984 + HAL1b LINE L1 466 817 -531 1280 158 97 24 chr20 24477276 24477611 -47676271 - MSTD LTR MaLR 0 396 1 255 297 46 67 chr20 24477861 24478100 -47675782 + L2 LINE L2 2512 2745 -569 761 313 92 29 chr20 24478124 24478539 -47675343 + L2 LINE L2 2871 3311 -2 1887 115 52 3 chr20 24478541 24478777 -47675105 + AluSc SINE Alu 3 257 -52 207 0 0 0 chr20 24478777 24478800 -47675082 + (CACTC)n Simple_repeat Simple_repeat 5 27 0 1887 115 52 3 chr20 24478800 24478850 -47675032 + AluSc SINE Alu 257 303 -6 448 337 42 39 chr20 24479024 24479383 -47674499 + L1M4 LINE L1 2205 2564 -3582 478 283 44 112 chr20 24479608 24479859 -47674023 + L1M4 LINE L1 2678 2911 -3235 3314 161 71 3 chr20 24479912 24480490 -47673392 + MER41B LTR ERV1 17 633 -2 28 0 0 0 chr20 24480519 24480547 -47673335 + AT_rich Low_complexity Low_complexity 1 28 0 1864 149 7 0 chr20 24480581 24480876 -47673006 + AluJb SINE Alu 2 298 -14 180 0 0 0 chr20 24481303 24481323 -47672559 + (GGAGA)n Simple_repeat Simple_repeat 2 21 0 712 185 23 52 chr20 24481658 24481831 -47672051 + L2 LINE L2 3144 3311 -2 669 256 104 15 chr20 24482136 24482406 -47671476 + L2 LINE L2 2467 2760 -554 1377 154 124 77 chr20 24482433 24482861 -47671021 - LTR7 LTR ERV1 -2 448 1 2518 82 45 13 chr20 24482861 24483239 -47670643 - HERVH LTR ERV1 0 7713 7324 381 118 105 53 chr20 24483239 24483315 -47670567 - HERVH LTR ERV1 -1894 5819 5740 * 2936 114 7 2 chr20 24483302 24483739 -47670143 - HERVH LTR ERV1 -3783 3930 3492 866 162 20 0 chr20 24483729 24483877 -47670005 - HERVH LTR ERV1 -4423 3290 3140 * 19992 89 51 7 chr20 24483871 24486730 -47667152 - HERVH LTR ERV1 -4726 2987 1 1414 156 121 77 chr20 24486732 24487161 -47666721 - LTR7 LTR ERV1 -2 448 1 370 285 57 0 chr20 24487310 24487433 -47666449 + L2 LINE L2 3141 3270 -2 323 209 0 23 chr20 24488532 24488618 -47665264 + C-rich Low_complexity Low_complexity 5 88 0 1956 127 7 0 chr20 24489967 24490258 -47663624 + AluSx SINE Alu 1 293 -19 184 286 0 88 chr20 24491315 24491406 -47662476 + L2 LINE L2 3231 3313 0 301 299 78 7 chr20 24491744 24491898 -47661984 + MER103 DNA DNA 1 165 -1 2062 97 0 4 chr20 24493135 24493443 -47660439 - AluSq SINE Alu 0 313 7 1877 133 0 11 chr20 24493487 24493795 -47660087 + AluSx SINE Alu 1 305 0 258 81 0 0 chr20 24493906 24493943 -47659939 + (TGAA)n Simple_repeat Simple_repeat 3 39 0 227 308 29 29 chr20 24495074 24495246 -47658636 - L1M4 LINE L1 -1090 5056 4885 689 99 20 0 chr20 24495303 24495404 -47658478 - AluSx SINE Alu -5 305 203 1063 62 0 0 chr20 24495404 24495534 -47658348 - AluSx SINE Alu -183 130 1 185 286 71 12 chr20 24495768 24495852 -47658030 + MIR3 SINE MIR 7 95 -113 2114 111 30 0 chr20 24497023 24497321 -47656561 + AluSx SINE Alu 1 307 -5 3707 137 55 0 chr20 24497371 24497986 -47655896 - MER39B LTR ERV1 0 653 5 2214 81 10 3 chr20 24498026 24498324 -47655558 + AluSq SINE Alu 1 300 -13 278 271 107 0 chr20 24498593 24498715 -47655167 - LTR16A1 LTR ERVL -1 456 322 315 333 83 6 chr20 24498827 24498983 -47654899 - LTR16C LTR ERVL -321 170 3 2086 95 0 41 chr20 24499297 24499614 -47654268 - AluSx SINE Alu -3 309 6 2034 126 110 40 chr20 24501095 24501469 -47652413 - MER21A LTR ERV1 -20 911 512 1577 209 98 6 chr20 24501470 24501786 -47652096 - MER21B LTR ERV1 -518 345 1 229 316 59 7 chr20 24501792 24501928 -47651954 + L2 LINE L2 1049 1191 -2123 254 213 53 40 chr20 24502116 24502191 -47651691 + MER112 DNA MER1_type 152 227 -33 1298 265 96 49 chr20 24502208 24502846 -47651036 + L2 LINE L2 1305 1972 -1342 456 190 13 0 chr20 24502846 24502925 -47650957 - MER45 DNA AcHobo -960 80 1 370 348 44 13 chr20 24503134 24503292 -47650590 - MIR SINE MIR -95 167 5 1094 177 55 124 chr20 24503328 24503746 -47650136 - MLT1B LTR MaLR 0 390 2 223 141 56 14 chr20 24504246 24504317 -47649565 + (TATAA)n Simple_repeat Simple_repeat 2 75 0 195 283 0 19 chr20 24504995 24505048 -47648834 - L2 LINE L2 0 3313 3262 585 325 173 10 chr20 24505106 24505614 -47648268 - L2 LINE L2 -561 2753 2163 404 346 78 4 chr20 24505927 24506158 -47647724 - MIR SINE MIR -13 249 2 3130 112 24 93 chr20 24506454 24506834 -47647048 + MER4B LTR ERV1 1 486 -293 2175 122 0 0 chr20 24506834 24507145 -47646737 + AluSx SINE Alu 1 311 -1 3130 112 24 93 chr20 24507145 24507420 -47646462 + MER4B LTR ERV1 486 779 0 247 306 45 18 chr20 24508630 24508741 -47645141 - MIR3 SINE MIR -4 204 91 562 269 53 62 chr20 24508754 24508981 -47644901 - MIR SINE MIR -10 252 28 200 244 44 0 chr20 24509719 24509764 -47644118 - L2 LINE L2 -16 3256 3210 198 278 70 78 chr20 24509853 24509968 -47643914 - MIR SINE MIR -137 125 12 239 242 33 0 chr20 24510392 24510483 -47643399 - L1ME4a LINE L1 0 6121 6028 701 308 53 4 chr20 24511027 24511254 -47642628 + MIR SINE MIR 6 243 -19 509 305 133 13 chr20 24511409 24511642 -47642240 - MLT1J2 LTR MaLR -119 331 71 1599 138 0 8 chr20 24511865 24512112 -47641770 - AluSq SINE Alu -68 245 1 1980 117 31 0 chr20 24512667 24512957 -47640925 + AluSx SINE Alu 1 299 -13 182 319 14 14 chr20 24513641 24513710 -47640172 - L2 LINE L2 0 3272 3204 864 247 151 47 chr20 24513941 24514386 -47639496 - LTR16C LTR ERVL 0 491 1 228 67 0 0 chr20 24514705 24514735 -47639147 + (TG)n Simple_repeat Simple_repeat 1 30 0 249 33 0 0 chr20 24515656 24515686 -47638196 + (CA)n Simple_repeat Simple_repeat 2 31 0 1066 254 74 106 chr20 24516450 24517056 -47636826 + MLT1G LTR MaLR 1 582 -8 2255 95 0 7 chr20 24517527 24517831 -47636051 + AluSg SINE Alu 3 304 -6 694 255 184 5 chr20 24517899 24518111 -47635771 + MIR SINE MIR 8 257 -5 342 223 66 146 chr20 24518441 24518697 -47635185 + L1M4 LINE L1 3957 4191 -1955 1792 157 3 23 chr20 24518697 24519003 -47634879 + AluSq SINE Alu 1 300 -13 342 223 66 146 chr20 24519003 24519020 -47634862 + L1M4 LINE L1 4191 4208 -1938 1802 241 73 26 chr20 24519029 24519764 -47634118 + L1M4 LINE L1 4335 5104 -1042 298 91 0 0 chr20 24519769 24519813 -47634069 + L1ME3 LINE L1 6112 6155 -7 614 314 220 5 chr20 24520110 24520483 -47633399 - L3 LINE CR1 -73 1504 1052 616 191 0 37 chr20 24520895 24521031 -47632851 + FLAM_A SINE Alu 1 131 -2 248 298 199 0 chr20 24523059 24523200 -47630682 + MIR SINE MIR 60 228 -34 287 25 25 0 chr20 24523324 24523364 -47630518 + (TG)n Simple_repeat Simple_repeat 2 42 0 1298 211 73 3 chr20 24523473 24523776 -47630106 - MER33 DNA MER1_type 0 324 1 1809 120 85 0 chr20 24524658 24524941 -47628941 + AluSx SINE Alu 1 307 -5 21 0 0 0 chr20 24525284 24525305 -47628577 + AT_rich Low_complexity Low_complexity 1 21 0 500 185 22 0 chr20 24526352 24526495 -47627387 + AluY SINE Alu 218 362 0 537 267 43 51 chr20 24526745 24527000 -47626882 - MER112 DNA MER1_type 0 256 4 480 210 232 7 chr20 24527017 24527155 -47626727 - MER5B DNA MER1_type -5 173 5 2116 86 34 0 chr20 24528244 24528535 -47625347 - AluY SINE Alu -10 301 1 255 152 0 0 chr20 24529006 24529052 -47624830 + (TG)n Simple_repeat Simple_repeat 2 47 0 22 0 0 0 chr20 24529089 24529111 -47624771 + AT_rich Low_complexity Low_complexity 1 22 0 1710 180 0 3 chr20 24529289 24529583 -47624299 - AluJb SINE Alu -17 295 3 475 299 33 38 chr20 24530378 24530562 -47623320 - MIR SINE MIR -6 256 74 861 248 124 32 chr20 24530696 24531011 -47622871 + MLT1G3 LTR MaLR 1 344 -251 474 218 30 105 chr20 24531037 24531170 -47622712 + MLT1G3 LTR MaLR 429 551 -44 444 337 22 16 chr20 24531170 24531354 -47622528 - MIR SINE MIR -71 191 7 194 0 0 37 chr20 24531663 24531690 -47622192 + (TTTTA)n Simple_repeat Simple_repeat 4 29 0 2302 67 0 3 chr20 24531706 24532004 -47621878 - AluY SINE Alu -13 298 2 201 324 88 37 chr20 24532017 24532153 -47621729 + L2 LINE L2 3125 3267 -5 654 236 23 14 chr20 24532504 24532689 -47621193 - MIR SINE MIR -63 145 13 712 193 7 22 chr20 24532737 24532872 -47621010 + FLAM_C SINE Alu 1 133 0 2205 123 9 0 chr20 24533680 24534021 -47619861 + L1P LINE L1 4694 5037 -1109 8773 121 0 30 chr20 24534025 24535413 -47618469 - L1P LINE L1 -1438 4708 3363 360 175 0 0 chr20 24535413 24535476 -47618406 - MIR SINE MIR -104 158 96 435 306 60 9 chr20 24535553 24535769 -47618113 - LTR16C LTR ERVL -38 453 227 2358 103 0 0 chr20 24535794 24536086 -47617796 - AluSx SINE Alu -20 292 1 5797 51 1 4 chr20 24536103 24536815 -47617067 - L1PA7 LINE L1 0 6154 5445 250 183 30 168 chr20 24536949 24536999 -47616883 - MLT1H LTR MaLR -8 541 486 1646 174 75 3 chr20 24536999 24537281 -47616601 + AluJb SINE Alu 1 302 -10 250 183 30 168 chr20 24537281 24537361 -47616521 - MLT1H LTR MaLR -63 486 429 503 349 12 0 chr20 24537486 24537658 -47616224 - MLT1H LTR MaLR -298 251 78 2120 123 0 29 chr20 24540501 24540810 -47613072 + AluSx SINE Alu 1 300 -12 2484 49 0 61 chr20 24541068 24541395 -47612487 - AluY SINE Alu -4 307 1 1110 280 69 3 chr20 24541521 24541885 -47611997 - LTR16C LTR ERVL -30 461 74 273 305 42 8 chr20 24542126 24542244 -47611638 + L1MC4a LINE L1 5815 5936 -1872 * 311 226 21 11 chr20 24542234 24542327 -47611555 - L1MB7 LINE L1 -5 6179 6086 * 2981 217 31 6 chr20 24542326 24542971 -47610911 - L1ME1 LINE L1 -230 5936 5276 247 106 0 43 chr20 24542978 24543025 -47610857 + L1MD3 LINE L1 7941 7985 -10 440 322 47 28 chr20 24543783 24543994 -47609888 - L2 LINE L2 0 3313 3099 28 48 0 0 chr20 24544100 24544142 -47609740 + AT_rich Low_complexity Low_complexity 1 42 0 1522 187 34 10 chr20 24544983 24545277 -47608605 - AluJo SINE Alu -11 301 1 22 35 0 0 chr20 24545343 24545372 -47608510 + AT_rich Low_complexity Low_complexity 1 29 0 751 225 157 64 chr20 24547167 24547564 -47606318 + HAL1 LINE L1 1914 2391 -116 1839 196 14 19 chr20 24547564 24547927 -47605955 - MLT1A1 LTR MaLR -4 361 1 751 225 157 64 chr20 24547927 24548055 -47605827 + HAL1 LINE L1 2391 2506 -1 329 319 8 8 chr20 24548107 24548226 -47605656 - MIR SINE MIR -133 129 11 1646 146 51 42 chr20 24548317 24548694 -47605188 - Tigger3(Golem) DNA MER2_type -2 3027 1 2130 110 0 0 chr20 24548865 24549146 -47604736 + AluSg SINE Alu 30 310 0 293 317 107 39 chr20 24549192 24549397 -47604485 + L1MC4a LINE L1 5700 5918 -1890 1712 193 67 20 chr20 24549505 24549862 -47604020 - MLT1A2 LTR MaLR 0 374 1 1701 165 37 0 chr20 24549945 24550218 -47603664 - AluJb SINE Alu -29 283 1 341 217 198 0 chr20 24551086 24551192 -47602690 - MER5A DNA MER1_type -4 185 59 336 245 61 95 chr20 24551246 24551393 -47602489 + MER63A DNA MER1_type 53 194 -16 300 331 0 8 chr20 24551511 24551641 -47602241 + L2 LINE L2 2245 2373 -941 819 115 0 39 chr20 24603432 24603562 -47550320 - AluJo SINE Alu -176 136 12 2037 98 0 0 chr20 24603577 24603918 -47549964 - AluSg SINE Alu 0 347 7 246 311 98 30 chr20 24603931 24604063 -47549819 + MIR SINE MIR 8 148 -114 553 260 56 62 chr20 24604777 24604894 -47548988 + LTR16C LTR ERVL 190 306 -185 1957 125 0 0 chr20 24604894 24605174 -47548708 + AluSx SINE Alu 1 280 -32 324 0 0 0 chr20 24605174 24605210 -47548672 + (CAAA)n Simple_repeat Simple_repeat 4 39 0 553 260 56 62 chr20 24605210 24605395 -47548487 + LTR16C LTR ERVL 304 491 0 351 293 38 0 chr20 24605460 24605566 -47548316 + L2 LINE L2 3185 3294 -19 234 0 0 0 chr20 24606045 24606071 -47547811 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 1998 124 13 3 chr20 24606087 24606394 -47547488 + AluSx SINE Alu 1 310 -2 2501 49 0 7 chr20 24606740 24607047 -47546835 - AluY SINE Alu -6 305 1 1914 134 40 0 chr20 24607237 24607535 -47546347 - AluSx SINE Alu -2 310 1 253 304 78 0 chr20 24607536 24607651 -47546231 - MER104 DNA Tc2 -11 169 46 393 191 18 131 chr20 24608263 24608431 -47545451 + LTR37B LTR ERV1 124 272 -196 346 158 168 20 chr20 24608610 24608665 -47545217 + LTR37B LTR ERV1 344 389 -79 369 0 0 0 chr20 24608665 24608706 -47545176 + (CA)n Simple_repeat Simple_repeat 2 42 0 346 158 168 20 chr20 24608706 24608751 -47545131 + LTR37B LTR ERV1 389 459 -9 253 269 127 75 chr20 24608752 24608886 -47544996 + MIR3 SINE MIR 48 188 -20 590 286 77 18 chr20 24609038 24609311 -47544571 + L1ME4a LINE L1 5561 5849 -272 27 0 0 0 chr20 24609937 24609964 -47543918 + AT_rich Low_complexity Low_complexity 1 27 0 315 272 22 0 chr20 24610295 24610387 -47543495 + MER103 DNA DNA 60 153 -13 1434 182 68 0 chr20 24610443 24610723 -47543159 - AluJo SINE Alu -13 299 1 2257 95 0 0 chr20 24610796 24611100 -47542782 - AluSc SINE Alu -5 304 1 692 207 85 38 chr20 24611585 24611936 -47541946 + LTR16C LTR ERVL 79 484 -7 315 250 271 0 chr20 24612242 24612382 -47541500 - MER5A DNA MER1_type -2 187 10 267 315 72 9 chr20 24612390 24612501 -47541381 + L2 LINE L2 3147 3264 -8 856 277 62 11 chr20 24613127 24613484 -47540398 + L1ME2 LINE L1 5651 6025 -139 * 2771 143 16 2 chr20 24613165 24613611 -47540271 + L1MB3 LINE L1 5691 6142 -41 740 192 0 0 chr20 24613612 24613732 -47540150 + FLAM_C SINE Alu 1 120 -13 380 68 0 0 chr20 24613763 24613822 -47540060 + L1MB3 LINE L1 6125 6183 0 2171 123 0 0 chr20 24614285 24614594 -47539288 + AluSq SINE Alu 5 313 0 325 250 48 0 chr20 24615232 24615316 -47538566 + L1ME3A LINE L1 6075 6162 -8 408 260 60 97 chr20 24615350 24615669 -47538213 + L1MC4 LINE L1 7616 7922 -120 2081 104 0 10 chr20 24615706 24616003 -47537879 + AluSq SINE Alu 1 294 -19 495 238 14 49 chr20 24616037 24616180 -47537702 + L1MC4 LINE L1 7903 8040 -2 2082 110 3 7 chr20 24616190 24616489 -47537393 + AluSx SINE Alu 1 298 -14 183 156 0 0 chr20 24616544 24616576 -47537306 + A-rich Low_complexity Low_complexity 1 32 0 1895 154 13 0 chr20 24616587 24616893 -47536989 + AluSx SINE Alu 1 310 -2 22 0 0 0 chr20 24616893 24616915 -47536967 + AT_rich Low_complexity Low_complexity 1 22 0 353 215 83 56 chr20 24617259 24617403 -47536479 + MIR SINE MIR 2 149 -113 2085 114 3 0 chr20 24617896 24618195 -47535687 + AluSq SINE Alu 1 300 -13 2456 62 0 0 chr20 24618542 24618850 -47535032 - AluY SINE Alu -3 308 1 444 233 98 38 chr20 24619099 24619232 -47534650 - MIR SINE MIR -65 197 57 1941 145 11 103 chr20 24619712 24620147 -47533735 + MSTD LTR MaLR 2 396 0 253 246 321 8 chr20 24620312 24620446 -47533436 + Charlie8 DNA MER1_type 101 276 -2141 247 290 0 14 chr20 24620509 24620578 -47533304 + Charlie8 DNA MER1_type 2350 2417 0 1780 169 3 7 chr20 24620596 24620892 -47532990 - AluJo SINE Alu -17 295 1 255 333 45 15 chr20 24620984 24621116 -47532766 + MIR SINE MIR 56 191 -71 749 228 46 64 chr20 24621139 24621299 -47532583 - MER58A DNA MER1_type -2196 224 68 1401 141 47 78 chr20 24621299 24621619 -47532263 - AluJo SINE Alu -2 310 1 749 228 46 64 chr20 24621619 24621677 -47532205 - MER58A DNA MER1_type -2352 68 10 196 319 168 13 chr20 24622389 24622615 -47531267 + L2 LINE L2 2843 3103 -210 221 286 22 55 chr20 24622634 24622725 -47531157 + L2 LINE L2 3225 3312 -1 282 250 40 105 chr20 24622766 24622782 -47531100 - L2 LINE L2 -1 3312 3297 260 27 27 0 chr20 24622782 24622819 -47531063 + (TA)n Simple_repeat Simple_repeat 2 39 0 1972 96 70 0 chr20 24622819 24623091 -47530791 - AluSx SINE Alu -21 291 1 282 250 40 105 chr20 24623091 24623197 -47530685 - L2 LINE L2 -14 3299 3197 953 177 18 0 chr20 24623329 24623493 -47530389 - MER20 DNA MER1_type 0 219 53 654 298 75 26 chr20 24623668 24623894 -47529988 + MER90 LTR ERV1 151 405 -170 598 142 120 87 chr20 24623894 24623934 -47529948 - MER53 DNA DNA 0 189 152 2171 81 0 0 chr20 24623934 24624248 -47529634 - AluY SINE Alu 0 314 1 598 142 120 87 chr20 24624248 24624389 -47529493 - MER53 DNA DNA -37 152 1 654 298 75 26 chr20 24624389 24624551 -47529331 + MER90 LTR ERV1 405 558 -17 521 174 261 7 chr20 24624879 24625017 -47528865 + MIR SINE MIR 72 244 -18 2190 110 3 0 chr20 24625017 24625325 -47528557 - AluSx SINE Alu -3 309 1 410 229 174 0 chr20 24625977 24626086 -47527796 - MER5A DNA MER1_type 0 189 62 2252 85 20 0 chr20 24626086 24626391 -47527491 - AluSp SINE Alu -2 311 1 855 129 0 50 chr20 24626413 24626552 -47527330 - FLAM_C SINE Alu 0 133 2 2031 112 37 0 chr20 24626562 24626858 -47527024 - AluSx SINE Alu -5 307 1 713 181 62 119 chr20 24626870 24627113 -47526769 + MER102a DNA MER1_type 97 325 -5 1439 230 155 22 chr20 24627137 24627613 -47526269 + MLT1F1 LTR MaLR 14 558 -9 302 234 50 59 chr20 24628034 24628195 -47525687 - L1M4 LINE L1 -3111 3035 2879 1614 203 37 17 chr20 24628247 24628655 -47525227 + LTR37B LTR ERV1 53 468 0 1602 183 0 7 chr20 24629046 24629346 -47524536 + AluJo SINE Alu 1 298 -14 273 152 0 22 chr20 24629531 24629577 -47524305 + MIR3 SINE MIR 114 158 -50 560 161 15 106 chr20 24629577 24629651 -47524231 + MER33 DNA MER1_type 1 53 -2420 1882 143 0 10 chr20 24629651 24629958 -47523924 + AluSx SINE Alu 1 304 -8 560 161 15 106 chr20 24629958 24630016 -47523866 + MER33 DNA MER1_type 53 115 -97 896 149 21 10 chr20 24630085 24630279 -47523603 + MER33 DNA MER1_type 156 351 -12 1570 128 0 4 chr20 24630641 24630883 -47522999 + AluSg/x SINE Alu 72 312 0 210 189 27 27 chr20 24632410 24632484 -47521398 + GA-rich Low_complexity Low_complexity 5 78 0 581 217 17 0 chr20 24632509 24632624 -47521258 + FLAM_C SINE Alu 2 118 -25 31 0 0 0 chr20 24632642 24632673 -47521209 + AT_rich Low_complexity Low_complexity 1 31 0 1902 143 3 3 chr20 24632962 24633270 -47520612 - AluSx SINE Alu -4 308 1 242 289 83 33 chr20 24634009 24634130 -47519752 + L2 LINE L2 3165 3291 -22 527 127 0 0 chr20 24634384 24634463 -47519419 + AluJ/FLAM SINE Alu 2 80 -232 191 36 36 0 chr20 24634464 24634492 -47519390 + (GAAA)n Simple_repeat Simple_repeat 3 31 0 2238 82 4 0 chr20 24634547 24634827 -47519055 + AluSg1 SINE Alu 1 281 -28 204 67 0 0 chr20 24634827 24634857 -47519025 + (TTAA)n Simple_repeat Simple_repeat 1 30 0 2158 121 0 32 chr20 24635208 24635523 -47518359 - AluSx SINE Alu -7 305 1 1086 274 48 53 chr20 24635862 24636363 -47517519 + MER110 LTR ERV1 1 472 -6 284 0 28 0 chr20 24636970 24637006 -47516876 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 23 0 0 0 chr20 24639695 24639718 -47514164 + AT_rich Low_complexity Low_complexity 1 23 0 1679 148 60 25 chr20 24639750 24640033 -47513849 + AluJo SINE Alu 7 299 -13 219 139 0 0 chr20 24640430 24640466 -47513416 + (GAA)n Simple_repeat Simple_repeat 2 37 0 189 196 0 0 chr20 24641068 24641114 -47512768 + C-rich Low_complexity Low_complexity 5 50 0 1399 137 23 104 chr20 24641160 24641358 -47512524 - L1MA8 LINE L1 0 6291 6133 2082 126 3 25 chr20 24641358 24641676 -47512206 - AluSx SINE Alu -1 311 1 1399 137 23 104 chr20 24641676 24641841 -47512041 - L1MA8 LINE L1 -158 6133 5956 23 0 0 0 chr20 24642607 24642630 -47511252 + AT_rich Low_complexity Low_complexity 1 23 0 1787 150 3 27 chr20 24642631 24642925 -47510957 - AluJo SINE Alu -25 287 1 707 160 0 76 chr20 24642951 24643095 -47510787 + FLAM_C SINE Alu 2 134 -9 1828 161 0 10 chr20 24643417 24643722 -47510160 + AluJo SINE Alu 1 302 -10 869 183 52 0 chr20 24643992 24644145 -47509737 - Tigger2 DNA MER2_type 0 2718 2558 * 987 154 16 21 chr20 24644137 24644325 -47509557 - Tigger2 DNA MER2_type -2529 189 3 819 185 0 51 chr20 24645312 24645490 -47508392 + FRAM SINE Alu 1 165 -11 896 188 59 30 chr20 24645704 24645906 -47507976 + MER63A DNA MER1_type 2 209 -1 285 337 42 0 chr20 24646233 24646328 -47507554 + L2 LINE L2 3174 3272 0 1421 196 127 0 chr20 24646392 24646667 -47507215 + AluJb SINE Alu 1 310 -2 2002 137 17 10 chr20 24646789 24647089 -47506793 - AluSx SINE Alu -10 302 1 1094 302 53 14 chr20 24648386 24648922 -47504960 - MER115 DNA AcHobo -11 682 89 1785 164 10 7 chr20 24649030 24649323 -47504559 - AluJb SINE Alu -18 294 1 2280 101 16 3 chr20 24650131 24650437 -47503445 - AluSq SINE Alu -3 310 1 318 127 0 18 chr20 24650719 24650774 -47503108 - U5 snRNA snRNA -62 54 1 27 29 0 0 chr20 24651406 24651440 -47502442 + AT_rich Low_complexity Low_complexity 1 34 0 723 208 46 0 chr20 24651440 24651570 -47502312 - FRAM SINE Alu -45 131 1 2266 97 0 27 chr20 24651595 24651894 -47501988 + AluSg SINE Alu 1 291 -19 1988 150 0 0 chr20 24651900 24652187 -47501695 + AluSx SINE Alu 2 288 -24 243 0 0 0 chr20 24652190 24652217 -47501665 + (TAAAA)n Simple_repeat Simple_repeat 2 28 0 544 232 7 58 chr20 24652354 24652509 -47501373 - LTR16C LTR ERVL 0 491 345 3049 194 68 5 chr20 24652620 24652964 -47500918 + MER82 DNA MER2_type 17 417 -236 273 29 0 0 chr20 24652964 24652998 -47500884 + (CA)n Simple_repeat Simple_repeat 2 35 0 3049 194 68 5 chr20 24652998 24653252 -47500630 + MER82 DNA MER2_type 417 653 0 529 241 66 6 chr20 24653252 24653418 -47500464 + LTR37A LTR ERV1 96 271 -155 909 230 34 10 chr20 24653419 24653628 -47500254 + MER58A DNA MER1_type 1 214 -10 1825 149 7 26 chr20 24653634 24653974 -47499908 + AluJb SINE Alu 1 312 0 270 199 12 123 chr20 24653991 24654101 -47499781 + LTR37A LTR ERV1 273 359 -67 907 210 5 15 chr20 24654101 24654301 -47499581 - L1PB4 LINE L1 -4 6152 5955 270 199 12 123 chr20 24654301 24654361 -47499521 + LTR37A LTR ERV1 359 424 -2 2011 125 67 30 chr20 24654728 24655089 -47498793 - THE1C LTR MaLR -1 374 1 264 333 35 0 chr20 24655577 24655664 -47498218 + LTR16C LTR ERVL 232 321 -170 479 191 48 9 chr20 24655664 24655769 -47498113 - AluJb SINE Alu -202 110 2 246 233 0 17 chr20 24655998 24656058 -47497824 - MLT1K LTR MaLR 0 588 530 1751 275 68 30 chr20 24656072 24656388 -47497494 + L1MC4 LINE L1 7281 7583 -459 2120 147 7 0 chr20 24656388 24656695 -47497187 - AluSx SINE Alu -3 309 1 1751 275 68 30 chr20 24656695 24657109 -47496773 + L1MC4 LINE L1 7583 8039 -3 1619 152 68 14 chr20 24657112 24657225 -47496657 + AluJo SINE Alu 1 106 -206 378 0 0 0 chr20 24657225 24657267 -47496615 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 1619 152 68 14 chr20 24657267 24657449 -47496433 + AluJo SINE Alu 106 312 0 2329 95 3 7 chr20 24657955 24658261 -47495621 - AluSx SINE Alu -7 305 1 2167 238 31 20 chr20 24659282 24659866 -47494016 + L1MC4 LINE L1 7336 7925 -117 369 195 47 39 chr20 24659897 24660025 -47493857 + L1MC4 LINE L1 7914 8042 0 21 0 0 0 chr20 24660040 24660061 -47493821 + AT_rich Low_complexity Low_complexity 1 21 0 1981 142 0 0 chr20 24660135 24660442 -47493440 + AluSx SINE Alu 1 307 0 3508 101 13 4 chr20 24660711 24661176 -47492706 + MER1A DNA MER1_type 60 528 -1 1732 174 10 26 chr20 24661268 24661579 -47492303 + AluJo SINE Alu 1 306 -6 416 230 202 37 chr20 24661812 24661994 -47491888 - MER63B DNA MER1_type -3 1059 1 457 261 55 70 chr20 24662220 24662492 -47491390 + LTR37B LTR ERV1 201 468 0 534 252 76 57 chr20 24662898 24663108 -47490774 - MER106A DNA MER1_type -22 214 1 1402 233 50 9 chr20 24663321 24663639 -47490243 - LTR16C LTR ERVL 0 491 161 219 349 0 35 chr20 24664230 24664316 -47489566 - L2 LINE L2 -39 3233 3151 1219 121 83 194 chr20 24664325 24664431 -47489451 - MER31A LTR ERV1 -2 483 367 2187 99 0 3 chr20 24664431 24664750 -47489132 - AluSx SINE Alu 0 318 1 1219 121 83 194 chr20 24664750 24665039 -47488843 - MER31A LTR ERV1 -118 367 131 1171 157 34 0 chr20 24665495 24665699 -47488183 - MER31A LTR ERV1 -274 211 1 2065 99 18 21 chr20 24666437 24666761 -47487121 + AluSx SINE Alu 1 323 0 1424 290 26 0 chr20 24666828 24667207 -47486675 + LTR16C LTR ERVL 69 457 -34 434 324 23 0 chr20 24667254 24667470 -47486412 - L2 LINE L2 -921 2393 2173 310 219 42 31 chr20 24667678 24667774 -47486108 - MIR SINE MIR -163 99 3 193 368 149 0 chr20 24668387 24668615 -47485267 + L3 LINE CR1 244 505 -1072 3017 223 61 52 chr20 24668871 24669218 -47484664 + L1ME3 LINE L1 5074 5416 -746 698 211 0 0 chr20 24669218 24669354 -47484528 - FLAM_A SINE Alu 0 137 2 3017 223 61 52 chr20 24669354 24670084 -47483798 + L1ME3 LINE L1 5416 6159 -3 313 258 21 11 chr20 24670306 24670399 -47483483 - HsTC2a DNA Tc2 -2 740 647 563 116 0 11 chr20 24670407 24670502 -47483380 + (TTCC)n Simple_repeat Simple_repeat 4 97 0 1168 157 0 79 chr20 24670513 24670742 -47483140 - AluJo SINE Alu -16 296 86 761 235 115 47 chr20 24670748 24670964 -47482918 - HsTC2a DNA Tc2 -1263 635 435 2278 113 0 0 chr20 24670964 24671266 -47482616 - AluSg SINE Alu -8 302 1 761 235 115 47 chr20 24671266 24671516 -47482366 - HsTC2a DNA Tc2 -1463 435 74 15824 38 6 0 chr20 24671529 24674176 -47479706 + L1PA5 LINE L1 3503 6154 0 500 214 46 38 chr20 24674807 24674938 -47478944 + MLT1H LTR MaLR 29 160 -389 325 215 18 141 chr20 24675089 24675252 -47478630 + MLT1H LTR MaLR 406 548 -1 1597 169 15 11 chr20 24675353 24675619 -47478263 - AluJo SINE Alu -45 267 1 1985 130 13 41 chr20 24675937 24675957 -47477925 - AluSq SINE Alu -6 307 288 877 56 8 8 chr20 24675957 24676082 -47477800 + (TTCC)n Simple_repeat Simple_repeat 3 127 0 1985 130 13 41 chr20 24676082 24676377 -47477505 - AluSq SINE Alu -25 288 1 2369 95 0 10 chr20 24678503 24678807 -47475075 - AluSc SINE Alu -8 301 1 573 176 68 23 chr20 24678827 24678979 -47474903 - L1ME3A LINE L1 -2 6160 6008 931 238 10 5 chr20 24679009 24679202 -47474680 + MER58A DNA MER1_type 30 223 -1 1136 205 75 0 chr20 24679215 24679508 -47474374 - MER33 DNA MER1_type 0 324 10 506 301 7 0 chr20 24680022 24680168 -47473714 + Charlie8 DNA MER1_type 86 232 -2185 10164 80 10 1 chr20 24680192 24682312 -47471570 + L1PA7 LINE L1 4004 6141 -13 1226 26 0 7 chr20 24682315 24682466 -47471416 + (GAA)n Simple_repeat Simple_repeat 2 151 0 10092 128 38 24 chr20 24683336 24684518 -47469364 - Tigger1 DNA MER2_type 0 2418 1204 1970 107 0 63 chr20 24684518 24684863 -47469019 + AluSx SINE Alu 1 326 0 10092 128 38 24 chr20 24684863 24685306 -47468576 - Tigger1 DNA MER2_type -1214 1204 769 720 197 0 15 chr20 24685849 24685986 -47467896 + FAM SINE Alu 37 171 -14 209 278 118 69 chr20 24686762 24686906 -47466976 + MIR3 SINE MIR 9 159 -49 367 216 128 24 chr20 24686922 24687047 -47466835 - L1ME4a LINE L1 -1 6120 5983 250 343 25 16 chr20 24687522 24687647 -47466235 + MIR SINE MIR 17 147 -61 937 157 0 6 chr20 24688500 24688659 -47465223 + L1MB7 LINE L1 5705 5862 -322 230 160 20 40 chr20 24689207 24689257 -47464625 + GA-rich Low_complexity Low_complexity 5 53 0 325 291 40 40 chr20 24689263 24689411 -47464471 + L1MC/D LINE L1 2319 2466 -3960 430 311 101 34 chr20 24689451 24689660 -47464222 + L1MC/D LINE L1 5535 5757 -2331 614 241 68 72 chr20 24689792 24689847 -47464035 + MIR SINE MIR 26 80 -182 387 0 0 0 chr20 24689847 24689890 -47463992 + (TG)n Simple_repeat Simple_repeat 2 44 0 614 241 68 72 chr20 24689890 24690070 -47463812 + MIR SINE MIR 80 260 -2 574 300 92 56 chr20 24690164 24690554 -47463328 + L1M4 LINE L1 4201 4604 -1542 201 156 0 0 chr20 24691874 24691906 -47461976 + CT-rich Low_complexity Low_complexity 1 32 0 577 262 73 0 chr20 24691906 24692253 -47461629 - AluJb SINE Alu 0 495 137 187 315 0 0 chr20 24692597 24692651 -47461231 + MIR SINE MIR 67 120 -142 * 194 345 0 0 chr20 24692635 24692690 -47461192 + L2 LINE L2 3201 3255 -17 610 235 139 36 chr20 24693061 24693312 -47460570 - LTR16A1 LTR ERVL -39 418 142 1076 154 0 0 chr20 24693595 24693757 -47460125 + L1PA8A LINE L1 5952 6113 -18 1532 192 17 3 chr20 24693800 24694085 -47459797 - MER74A LTR ERVL -7 551 263 1255 210 20 78 chr20 24694085 24694432 -47459450 + MLT1A1 LTR MaLR 1 327 -38 908 184 38 14 chr20 24694429 24694655 -47459227 - MER74A LTR ERVL -276 346 73 * 407 349 34 8 chr20 24694652 24694890 -47458992 - LTR16B LTR ERVL -87 377 134 * 256 294 0 54 chr20 24694992 24695084 -47458798 + MIR SINE MIR 176 262 0 363 279 52 22 chr20 24695522 24695658 -47458224 - L1MC5 LINE L1 -38 7923 7784 589 193 34 0 chr20 24695984 24696103 -47457779 - LTR16A LTR ERVL -7 443 321 634 262 37 29 chr20 24696138 24696382 -47457500 - LTR16A LTR ERVL -202 248 3 240 261 15 0 chr20 24697411 24697476 -47456406 + LTR67 LTR ERVL 492 557 0 357 214 64 121 chr20 24698068 24698241 -47455641 - LTR33A LTR ERVL -349 174 12 210 71 0 0 chr20 24699234 24699262 -47454620 + (A)n Simple_repeat Simple_repeat 1 28 0 2269 97 0 0 chr20 24699784 24700084 -47453798 + AluSq SINE Alu 1 300 -13 249 386 148 0 chr20 24700162 24700426 -47453456 + L3 LINE CR1 426 728 -849 262 254 118 0 chr20 24700435 24700545 -47453337 + MER113 DNA MER1_type? 1 123 -398 408 219 252 20 chr20 24700638 24700789 -47453093 + MIR SINE MIR 74 259 -3 25 31 0 0 chr20 24700792 24700824 -47453058 + AT_rich Low_complexity Low_complexity 1 32 0 306 329 243 19 chr20 24701157 24701741 -47452141 + L3 LINE CR1 735 1449 -128 613 295 101 40 chr20 24701789 24702165 -47451717 - LTR16A1 LTR ERVL -1 456 58 485 306 17 12 chr20 24702425 24702598 -47451284 - MER69A DNA AcHobo -3 174 1 419 175 12 25 chr20 24703920 24704000 -47449882 + MIR SINE MIR 74 152 -110 30 45 0 0 chr20 24704079 24704123 -47449759 + AT_rich Low_complexity Low_complexity 1 44 0 192 40 0 0 chr20 24704383 24704408 -47449474 + (TG)n Simple_repeat Simple_repeat 2 26 0 246 311 98 30 chr20 24704933 24705065 -47448817 - MIR SINE MIR -114 148 8 2038 98 0 0 chr20 24705078 24705428 -47448454 + AluSg SINE Alu 7 356 0 819 115 0 39 chr20 24705443 24705573 -47448309 + AluJo SINE Alu 12 136 -176 346 184 0 151 chr20 24705925 24706137 -47447745 + C-rich Low_complexity Low_complexity 1 180 0 280 212 11 112 chr20 24706153 24706332 -47447550 + C-rich Low_complexity Low_complexity 3 163 0 358 220 6 96 chr20 24706366 24706543 -47447339 + C-rich Low_complexity Low_complexity 3 163 0 203 333 11 0 chr20 24706519 24706612 -47447270 + (CACCC)n Simple_repeat Simple_repeat 3 96 0 * 2392 80 3 0 chr20 24706663 24706975 -47446907 - AluSp SINE Alu 0 313 1 441 287 174 29 chr20 24707510 24708140 -47445742 + L1ME2 LINE L1 5295 6036 -85 1651 155 3 17 chr20 24709192 24709352 -47444530 - AluJo SINE Alu -20 292 136 1968 141 3 3 chr20 24709352 24709651 -47444231 - AluSx SINE Alu -13 299 1 1651 155 3 17 chr20 24709651 24709786 -47444096 - AluJo SINE Alu -176 136 1 2143 114 0 0 chr20 24709842 24710139 -47443743 - AluSx SINE Alu -15 297 1 243 0 0 0 chr20 24711278 24711305 -47442577 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1996 126 0 0 chr20 24711313 24711598 -47442284 - AluSx SINE Alu -27 285 1 717 194 0 15 chr20 24712905 24713039 -47440843 + AluJo SINE Alu 3 134 -178 22 0 0 0 chr20 24713203 24713225 -47440657 + AT_rich Low_complexity Low_complexity 1 22 0 802 163 16 0 chr20 24713253 24713376 -47440506 - FLAM_C SINE Alu -17 126 2 281 155 28 0 chr20 24713377 24713448 -47440434 - Charlie5 DNA MER1_type -128 2484 2412 654 107 100 29 chr20 24713457 24713597 -47440285 - L1MA4 LINE L1 0 6300 6151 327 276 114 32 chr20 24713687 24713810 -47440072 - L1ME3 LINE L1 -299 5863 5731 438 228 58 95 chr20 24713883 24713977 -47439905 - L1ME3 LINE L1 -549 5617 5532 1671 208 67 11 chr20 24713977 24714352 -47439530 + MSTD LTR MaLR 1 396 0 438 228 58 95 chr20 24714352 24714446 -47439436 - L1ME3 LINE L1 -634 5532 5436 1559 286 116 39 chr20 24714546 24715580 -47438302 + L2 LINE L2 2081 3272 0 891 171 78 81 chr20 24715689 24715744 -47438138 - Charlie1 DNA MER1_type -1 2760 2706 2043 126 0 3 chr20 24715744 24716046 -47437836 - AluSx SINE Alu -11 301 1 891 171 78 81 chr20 24716046 24716248 -47437634 - Charlie1 DNA MER1_type -55 2706 2504 189 153 305 17 chr20 24716261 24716320 -47437562 + L2 LINE L2 3197 3272 0 234 272 10 78 chr20 24718119 24718222 -47435660 + MIR3 SINE MIR 104 199 -9 232 310 20 20 chr20 24718905 24719005 -47434877 - MIR SINE MIR -42 220 121 470 184 46 9 chr20 24719560 24719669 -47434213 - Charlie4 DNA MER1_type -42 1919 1807 695 199 83 22 chr20 24719728 24719909 -47433973 - Charlie4 DNA MER1_type -1712 249 58 432 317 40 5 chr20 24719910 24720134 -47433748 + L2 LINE L2 1924 2155 -1159 1713 149 0 21 chr20 24720134 24720461 -47433421 - AluJo SINE Alu 0 321 1 720 219 6 24 chr20 24720508 24720677 -47433205 + MIR SINE MIR 86 251 -11 1164 243 252 38 chr20 24720703 24720983 -47432899 + L2 LINE L2 2173 2392 -921 1922 133 0 17 chr20 24720983 24721284 -47432598 - AluSx SINE Alu -16 296 1 1164 243 252 38 chr20 24721284 24721780 -47432102 + L2 LINE L2 2392 2781 -532 1700 156 13 16 chr20 24721780 24722088 -47431794 - AluSx SINE Alu -5 307 1 1164 243 252 38 chr20 24722088 24722233 -47431649 + L2 LINE L2 2781 3312 -1 2016 130 10 0 chr20 24723769 24724069 -47429813 + AluSg SINE Alu 1 303 -7 243 0 0 0 chr20 24725912 24725939 -47427943 + (T)n Simple_repeat Simple_repeat 1 27 0 215 365 79 16 chr20 24727044 24727170 -47426712 - MIR3 SINE MIR -67 141 8 1661 150 29 23 chr20 24728370 24728677 -47425205 + AluSx SINE Alu 1 309 -3 2111 103 28 0 chr20 24728685 24728976 -47424906 + AluSx SINE Alu 1 299 -13 778 141 0 47 chr20 24729156 24729284 -47424598 + FLAM_A SINE Alu 1 122 -11 30 27 0 0 chr20 24729285 24729322 -47424560 + AT_rich Low_complexity Low_complexity 1 37 0 1524 92 0 0 chr20 24730341 24730548 -47423334 - AluSg/x SINE Alu -22 288 82 830 207 0 11 chr20 24730738 24730912 -47422970 - AluJb SINE Alu -11 301 130 2015 119 3 10 chr20 24730934 24731236 -47422646 + AluSx SINE Alu 1 300 -12 448 228 104 47 chr20 24732361 24732506 -47421376 - L1MD3 LINE L1 -3 8039 7904 180 0 0 0 chr20 24732506 24732526 -47421356 + (TTTC)n Simple_repeat Simple_repeat 2 21 0 448 228 104 47 chr20 24732526 24732640 -47421242 - L1MD3 LINE L1 -138 7904 7768 862 181 7 39 chr20 24732644 24732819 -47421063 - AluSg/x SINE Alu 0 303 134 1626 166 0 14 chr20 24732821 24733111 -47420771 - AluJb SINE Alu -7 305 20 1152 286 43 13 chr20 24733156 24733625 -47420257 - L1MC4 LINE L1 -381 7661 7179 209 307 129 21 chr20 24733627 24733767 -47420115 - MIR SINE MIR -102 160 6 1043 211 155 48 chr20 24733906 24734319 -47419563 - LTR16A1 LTR ERVL 0 457 1 487 244 131 12 chr20 24734856 24735024 -47418858 + MER5A DNA MER1_type 2 189 0 213 146 24 0 chr20 24735033 24735074 -47418808 - MER5B DNA MER1_type -1 177 136 1895 126 24 7 chr20 24735075 24735368 -47418514 - AluSx SINE Alu -12 300 3 225 0 0 0 chr20 24735368 24735393 -47418489 + (TTTTC)n Simple_repeat Simple_repeat 2 26 0 1694 132 40 4 chr20 24735393 24735666 -47418216 - AluSx SINE Alu -29 283 1 214 238 0 0 chr20 24735666 24735708 -47418174 - MER5B DNA MER1_type -135 43 2 349 333 25 25 chr20 24736399 24736603 -47417279 + MIR SINE MIR 15 218 -44 239 327 58 10 chr20 24736721 24736825 -47417057 + MIR SINE MIR 39 147 -115 2483 180 8 17 chr20 24736881 24737272 -47416610 - L1MB7 LINE L1 -17 6167 5779 1815 169 0 3 chr20 24737272 24737573 -47416309 - AluJb SINE Alu -12 300 1 2483 180 8 17 chr20 24737573 24737654 -47416228 - L1MB7 LINE L1 -405 5779 5699 2239 109 0 3 chr20 24737911 24738224 -47415658 + AluSx SINE Alu 1 312 0 1951 125 0 14 chr20 24739331 24739628 -47414254 + AluSx SINE Alu 1 293 -19 847 219 41 5 chr20 24739644 24739840 -47414042 - MER3 DNA MER1_type -2 207 5 2050 135 0 0 chr20 24740523 24740834 -47413048 + AluSx SINE Alu 1 311 -1 1152 201 23 5 chr20 24740955 24741174 -47412708 - MER58A DNA MER1_type -1 223 1 405 202 56 11 chr20 24741742 24741831 -47412051 - MER91C DNA MER1_type -41 99 7 373 250 90 101 chr20 24741988 24742176 -47411706 - Charlie8 DNA MER1_type -2159 258 73 361 309 135 7 chr20 24742804 24743023 -47410859 + MIR SINE MIR 7 256 -6 1623 130 62 46 chr20 24743955 24744262 -47409620 + AluJb SINE Alu 1 312 0 1742 114 0 8 chr20 24744651 24744906 -47408976 + AluSx SINE Alu 41 293 -19 298 213 43 149 chr20 24744976 24745117 -47408765 - MIR SINE MIR -51 211 86 2144 90 17 0 chr20 24745273 24745562 -47408320 + AluSp SINE Alu 6 299 -14 2154 123 0 0 chr20 24745792 24746100 -47407782 - AluSx SINE Alu -4 308 1 787 121 9 0 chr20 24746229 24746345 -47407537 - FLAM_C SINE Alu -16 117 1 366 205 0 0 chr20 24747254 24747337 -47406545 + (CA)n Simple_repeat Simple_repeat 2 84 0 2163 121 0 0 chr20 24747542 24747848 -47406034 - AluSx SINE Alu -6 306 1 182 61 0 61 chr20 24747896 24747929 -47405953 + (TTTC)n Simple_repeat Simple_repeat 3 33 0 2223 91 3 3 chr20 24748262 24748559 -47405323 - AluSq SINE Alu -16 297 1 246 105 0 0 chr20 24748839 24748877 -47405005 + (CA)n Simple_repeat Simple_repeat 2 39 0 369 232 21 32 chr20 24749653 24749748 -47404134 - MER5A DNA MER1_type -77 112 19 447 274 177 27 chr20 24749794 24749980 -47403902 - MIR SINE MIR -43 219 6 282 179 0 0 chr20 24750380 24750436 -47403446 + (TG)n Simple_repeat Simple_repeat 1 56 0 1066 278 116 14 chr20 24751248 24751662 -47402220 + L2 LINE L2 2858 3313 0 183 42 0 0 chr20 24751700 24751724 -47402158 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 437 221 11 0 chr20 24752079 24752174 -47401708 + MER5A DNA MER1_type 10 105 -84 1999 134 0 0 chr20 24753672 24753978 -47399904 - AluSx SINE Alu -6 306 1 252 350 0 0 chr20 24754504 24754584 -47399298 - L2 LINE L2 -5 3267 3188 1568 177 65 30 chr20 24754754 24755126 -47398756 - Charlie5 DNA MER1_type 0 2620 2236 603 211 8 0 chr20 24755128 24755251 -47398631 - Charlie5 DNA MER1_type -2488 124 1 2236 96 0 0 chr20 24755443 24755745 -47398137 + AluSx SINE Alu 1 302 -10 268 308 58 58 chr20 24758130 24758302 -47395580 - L1ME3A LINE L1 -5 6165 5994 236 77 26 0 chr20 24758758 24758797 -47395085 + (TC)n Simple_repeat Simple_repeat 2 41 0 187 294 118 59 chr20 24759402 24759589 -47394293 - MIR SINE MIR -13 249 52 198 0 0 0 chr20 24761548 24761570 -47392312 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 2301 85 3 7 chr20 24761697 24762003 -47391879 + AluSq SINE Alu 1 305 -8 297 246 55 55 chr20 24762991 24763101 -47390781 - MIR SINE MIR -50 212 103 377 275 99 0 chr20 24763199 24763330 -47390552 - L1MD3 LINE L1 -434 7561 7418 429 213 0 32 chr20 24763345 24763439 -47390443 - MLT1F1 LTR MaLR -442 125 35 359 118 3 3 chr20 24763439 24763501 -47390381 - L1MC3 LINE L1 -688 7097 7048 246 171 0 0 chr20 24764189 24764230 -47389652 - MIR SINE MIR -117 145 105 338 264 99 8 chr20 24764468 24764589 -47389293 + MIR SINE MIR 12 143 -119 1406 238 106 20 chr20 24764630 24765025 -47388857 + LTR16C LTR ERVL 63 491 0 201 211 175 0 chr20 24765065 24765122 -47388760 + MIR SINE MIR 195 261 -1 442 261 67 36 chr20 24765279 24765444 -47388438 + MIR SINE MIR 92 261 -1 851 178 0 7 chr20 24765618 24765770 -47388112 - L1PB4 LINE L1 -6 6150 6000 1230 71 36 0 chr20 24765822 24765990 -47387892 - L1PA5 LINE L1 0 6154 5981 1069 46 0 8 chr20 24765991 24766122 -47387760 + L1PA5 LINE L1 5851 5980 -174 1888 169 11 31 chr20 24766137 24766421 -47387461 - MER7A DNA MER2_type -2692 346 71 2195 114 0 0 chr20 24766421 24766720 -47387162 + AluSx SINE Alu 1 299 -13 1888 169 11 31 chr20 24766720 24766789 -47387093 - MER7A DNA MER2_type -2967 71 2 761 151 0 50 chr20 24767527 24767666 -47386216 + FLAM_C SINE Alu 2 133 -10 500 301 93 6 chr20 24767771 24767954 -47385928 + MIR SINE MIR 25 223 -39 1461 238 56 60 chr20 24768742 24769222 -47384660 - L1ME3 LINE L1 -4 6158 5681 586 238 32 43 chr20 24769417 24769602 -47384280 + MIR SINE MIR 78 260 -2 1854 155 0 3 chr20 24770053 24770356 -47383526 - AluSx SINE Alu -10 302 1 1253 157 44 189 chr20 24770708 24771185 -47382697 - L1MC4 LINE L1 0 8042 7635 2161 121 0 7 chr20 24771206 24771512 -47382370 - AluSx SINE Alu -8 304 1 877 204 85 15 chr20 24773323 24773524 -47380358 - MER20 DNA MER1_type -4 215 1 846 210 0 0 chr20 24774286 24774453 -47379429 - L1MB5 LINE L1 0 6174 6008 382 135 0 27 chr20 24774519 24774593 -47379289 - L1ME4a LINE L1 -3 6118 6047 335 281 114 36 chr20 24776879 24777046 -47376836 - MLT1I LTR MaLR -8 401 222 27 0 0 0 chr20 24777188 24777215 -47376667 + AT_rich Low_complexity Low_complexity 1 27 0 1945 121 7 0 chr20 24777970 24778287 -47375595 + AluSx SINE Alu 1 319 0 200 289 118 52 chr20 24778291 24778426 -47375456 + L2 LINE L2 3163 3306 -7 2221 103 0 0 chr20 24779413 24779713 -47374169 + AluSx SINE Alu 1 300 -12 2110 99 0 20 chr20 24779915 24780218 -47373664 - AluSx SINE Alu -15 297 1 1643 153 3 45 chr20 24780252 24780566 -47373316 + AluJo SINE Alu 1 301 -11 501 206 10 0 chr20 24781114 24781216 -47372666 + MIR SINE MIR 66 168 -94 298 217 0 14 chr20 24781472 24781541 -47372341 + MER53 DNA DNA 122 189 0 246 227 0 91 chr20 24781844 24781932 -47371950 - MER116 DNA Mariner 0 80 1 694 215 0 15 chr20 24781985 24782120 -47371762 + FLAM_A SINE Alu 1 133 0 270 81 0 0 chr20 24783288 24783325 -47370557 + (T)n Simple_repeat Simple_repeat 1 37 0 312 279 48 58 chr20 24784762 24784866 -47369016 + L2 LINE L2 3210 3312 -1 678 126 16 63 chr20 24785366 24785493 -47368389 + FRAM SINE Alu 45 165 -11 2175 107 3 0 chr20 24786126 24786434 -47367448 + AluSx SINE Alu 1 309 -3 21 0 0 0 chr20 24786594 24786615 -47367267 + AT_rich Low_complexity Low_complexity 1 21 0 1556 151 7 32 chr20 24786638 24786922 -47366960 - AluJb SINE Alu -7 305 29 544 233 68 14 chr20 24787578 24787724 -47366158 + MER5B DNA MER1_type 3 156 -22 1415 189 38 22 chr20 24787882 24788199 -47365683 - MER33 DNA MER1_type -2 322 1 300 256 25 50 chr20 24788344 24788465 -47365417 + MIR SINE MIR 144 261 -1 2567 65 0 0 chr20 24788663 24788971 -47364911 - AluY SINE Alu -3 308 1 302 218 161 0 chr20 24789781 24789868 -47364014 + MER5A DNA MER1_type 12 112 -77 2309 100 3 0 chr20 24790457 24790757 -47363125 + AluSp SINE Alu 3 303 -10 518 241 69 86 chr20 24791101 24791280 -47362602 - HAL1 LINE L1 -27 2480 2305 2317 110 7 0 chr20 24791280 24791588 -47362294 - AluSx SINE Alu -2 310 1 518 241 69 86 chr20 24791588 24791653 -47362229 - HAL1 LINE L1 -202 2305 2240 380 289 35 75 chr20 24791699 24791900 -47361982 - HAL1 LINE L1 -1797 710 518 448 240 119 96 chr20 24791983 24792295 -47361587 - HAL1 LINE L1 -2185 322 4 30 27 0 0 chr20 24792302 24792339 -47361543 + AT_rich Low_complexity Low_complexity 1 37 0 23 0 0 0 chr20 24792456 24792479 -47361403 + AT_rich Low_complexity Low_complexity 1 23 0 249 33 0 0 chr20 24793029 24793059 -47360823 + (TTCC)n Simple_repeat Simple_repeat 2 31 0 534 153 0 0 chr20 24793138 24793223 -47360659 - AluS SINE Alu 0 310 226 204 125 0 0 chr20 24793238 24793270 -47360612 + (TTCCC)n Simple_repeat Simple_repeat 3 34 0 811 167 0 8 chr20 24793283 24793415 -47360467 - AluJo/FRAM SINE Alu -53 259 129 707 115 44 9 chr20 24793415 24793576 -47360306 - FLAM_C SINE Alu 0 191 27 391 186 9 56 chr20 24793594 24793770 -47360112 - L1ME1 LINE L1 -5 6161 5978 2222 139 0 0 chr20 24793770 24794080 -47359802 + AluSx SINE Alu 1 310 -2 391 186 9 56 chr20 24794080 24794322 -47359560 - L1ME1 LINE L1 -188 5978 5516 595 268 70 95 chr20 24794464 24794864 -47359018 + HAL1b LINE L1 376 765 -583 1110 132 6 0 chr20 24794881 24795048 -47358834 + AluSg/x SINE Alu 143 310 0 2198 102 0 7 chr20 24795063 24795357 -47358525 + AluSg1 SINE Alu 1 292 -17 1015 151 12 0 chr20 24795363 24795529 -47358353 + AluSg/x SINE Alu 140 307 -3 183 100 0 0 chr20 24795716 24795746 -47358136 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 2283 87 0 20 chr20 24795756 24796054 -47357828 - AluSg SINE Alu -18 292 1 216 0 0 0 chr20 24796054 24796078 -47357804 + (TTTA)n Simple_repeat Simple_repeat 3 26 0 2205 92 0 0 chr20 24796078 24796359 -47357523 - AluSx SINE Alu -30 282 2 549 224 109 61 chr20 24796359 24796653 -47357229 + HAL1b LINE L1 1041 1348 0 717 200 39 0 chr20 24796939 24797094 -47356788 - MIR SINE MIR -5 257 97 434 211 70 104 chr20 24797687 24797957 -47355925 + LTR37A LTR ERV1 8 268 -158 964 198 0 0 chr20 24797963 24798135 -47355747 - AluJb SINE Alu -3 309 138 1027 196 43 43 chr20 24798188 24798469 -47355413 + Charlie5 DNA MER1_type 2234 2514 -98 273 198 38 85 chr20 24798510 24798559 -47355323 + Charlie5 DNA MER1_type 2500 2550 -74 2165 78 9 56 chr20 24798559 24798881 -47355001 - AluSx SINE Alu -5 307 1 273 198 38 85 chr20 24798881 24798937 -47354945 + Charlie5 DNA MER1_type 2550 2600 -24 186 217 157 24 chr20 24800552 24800635 -47353247 + L3b LINE CR1 1292 1385 -198 4640 200 24 73 chr20 24800666 24800751 -47353131 + L1M1 LINE L1 2136 2224 -5341 2310 101 0 3 chr20 24800751 24801048 -47352834 - AluSg SINE Alu -14 296 1 4640 200 24 73 chr20 24801048 24802323 -47351559 + L1M1 LINE L1 2224 3429 -4136 3852 208 69 16 chr20 24802341 24803332 -47350550 + L1PB1 LINE L1 6 1048 -5815 15049 185 25 10 chr20 24803342 24808601 -47345281 + L1PB1 LINE L1 1297 6683 -184 2055 121 0 10 chr20 24808601 24808914 -47344968 + AluSg SINE Alu 1 310 0 15049 185 25 10 chr20 24808914 24809094 -47344788 + L1PB1 LINE L1 6683 6859 -8 7568 218 22 89 chr20 24809112 24809262 -47344620 + L1M1 LINE L1 3406 3565 -4000 1746 188 3 0 chr20 24809262 24809549 -47344333 + AluSx SINE Alu 1 288 -24 7568 218 22 89 chr20 24809549 24809651 -47344231 + L1M1 LINE L1 3565 3672 -3893 1816 175 3 10 chr20 24809651 24809959 -47343923 + AluJb SINE Alu 5 310 -2 7568 218 22 89 chr20 24809959 24810918 -47342964 + L1M1 LINE L1 3672 4694 -2871 3551 94 70 0 chr20 24810918 24811415 -47342467 + L1PA13 LINE L1 5628 6162 -1 7568 218 22 89 chr20 24811415 24812075 -47341807 + L1M1 LINE L1 4694 5397 -2168 680 244 8 0 chr20 24812075 24812202 -47341680 + FLAM_A SINE Alu 1 128 -14 7568 218 22 89 chr20 24812202 24812417 -47341465 + L1M1 LINE L1 5397 5625 -1940 2248 125 0 0 chr20 24812417 24812721 -47341161 + AluSq SINE Alu 3 306 -7 7568 218 22 89 chr20 24812721 24813665 -47340217 + L1M1 LINE L1 5625 6260 -1305 1883 132 44 0 chr20 24813665 24813982 -47339900 - AluSx SINE Alu 0 329 1 7568 218 22 89 chr20 24813982 24814069 -47339813 + L1M1 LINE L1 6260 6351 -1214 462 127 0 0 chr20 24814063 24814134 -47339748 + L1MA4 LINE L1 5141 5211 -2354 * 1157 201 0 0 chr20 24814192 24814406 -47339476 + L1MA4 LINE L1 5894 6107 -193 5949 135 29 13 chr20 24814407 24815726 -47338156 + L1MA4 LINE L1 6356 7687 -32 2642 268 92 55 chr20 24815787 24816781 -47337101 + L1M4 LINE L1 3602 4664 -1482 1799 168 0 3 chr20 24816781 24817067 -47336815 - AluJb SINE Alu -25 287 3 2642 268 92 55 chr20 24817067 24817446 -47336436 + L1M4 LINE L1 4664 5027 -1119 485 267 75 74 chr20 24817587 24818280 -47335602 + L1M4 LINE L1 2326 3019 -3127 4993 198 71 70 chr20 24818499 24818604 -47335278 + MER31-int LTR ERV1 2824 2927 -2009 180 0 0 0 chr20 24818604 24818624 -47335258 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 4993 198 71 70 chr20 24818624 24819942 -47333940 + MER31-int LTR ERV1 2927 4249 -687 270 218 109 40 chr20 24819946 24820047 -47333835 + LTR37A LTR ERV1 10 117 -309 395 194 3 173 chr20 24820063 24820331 -47333551 + MER31-int LTR ERV1 4411 4556 -380 604 225 6 77 chr20 24820412 24820581 -47333301 + MER31-int LTR ERV1 4571 4727 -209 26 0 0 0 chr20 24820753 24820779 -47333103 + AT_rich Low_complexity Low_complexity 1 26 0 263 134 146 61 chr20 24820782 24820864 -47333018 + MER34 LTR ERV1 450 538 -4 2011 92 0 4 chr20 24820889 24821149 -47332733 + AluSq SINE Alu 42 300 -13 229 233 87 27 chr20 24821152 24821302 -47332580 + L1P LINE L1 3063 3221 -2925 1183 265 136 35 chr20 24821817 24822338 -47331544 + L1MC4 LINE L1 7341 7914 -128 486 274 119 86 chr20 24822436 24823064 -47330818 - L1ME4a LINE L1 -125 5996 5348 1744 180 10 10 chr20 24823129 24823429 -47330453 + AluJo SINE Alu 1 300 -12 221 182 23 0 chr20 24823458 24823502 -47330380 + (CATATA)n Simple_repeat Simple_repeat 4 48 0 233 128 26 0 chr20 24823567 24823606 -47330276 + L1M4 LINE L1 3420 3459 -2687 450 0 0 0 chr20 24825005 24825055 -47328827 + (TA)n Simple_repeat Simple_repeat 1 50 0 2315 67 0 27 chr20 24825133 24825431 -47328451 + AluY SINE Alu 17 306 -5 2040 159 46 21 chr20 24826009 24826381 -47327501 + MLT1B LTR MaLR 6 386 -4 22 35 0 0 chr20 24827141 24827170 -47326712 + AT_rich Low_complexity Low_complexity 1 29 0 279 333 101 38 chr20 24827442 24827679 -47326203 - L3 LINE CR1 -15 1562 1311 1019 219 11 73 chr20 24828244 24828366 -47325516 - LTR16C LTR ERVL -26 465 366 1696 44 29 0 chr20 24828366 24828572 -47325310 + L1PA13 LINE L1 5950 6161 -2 1019 219 11 73 chr20 24828572 24828709 -47325173 - LTR16C LTR ERVL -125 366 222 364 316 17 0 chr20 24828776 24828893 -47324989 - LTR16C LTR ERVL 0 491 373 2085 131 3 13 chr20 24829128 24829442 -47324440 + AluSx SINE Alu 1 311 -1 437 289 14 14 chr20 24830436 24830578 -47323304 - MIR SINE MIR -16 246 105 2290 112 0 0 chr20 24830583 24830879 -47323003 + AluSq SINE Alu 1 296 -17 519 267 85 18 chr20 24831395 24831560 -47322322 - MIR SINE MIR -2 260 85 252 0 0 0 chr20 24831900 24831928 -47321954 + (TG)n Simple_repeat Simple_repeat 1 28 0 2238 109 7 0 chr20 24832426 24832728 -47321154 - AluSx SINE Alu -8 304 1 22 0 0 0 chr20 24834084 24834106 -47319776 + AT_rich Low_complexity Low_complexity 1 22 0 1826 206 50 19 chr20 24835721 24836139 -47317743 + MER63B DNA MER1_type 6 436 0 31 44 0 0 chr20 24836847 24836892 -47316990 + AT_rich Low_complexity Low_complexity 1 45 0 418 150 18 106 chr20 24837015 24837079 -47316803 - MER5B DNA MER1_type -1 177 126 558 174 148 17 chr20 24837079 24837194 -47316688 + FLAM_C SINE Alu 1 130 -3 418 150 18 106 chr20 24837194 24837242 -47316640 - MER5B DNA MER1_type -52 126 75 4461 158 60 34 chr20 24837260 24837332 -47316550 - L1MB7 LINE L1 0 6184 6115 2179 113 34 0 chr20 24837332 24837625 -47316257 + AluSx SINE Alu 2 304 -8 4461 158 60 34 chr20 24837625 24838460 -47315422 - L1MB7 LINE L1 -69 6115 5254 273 197 15 45 chr20 24838465 24838531 -47315351 - MER5B DNA MER1_type -114 64 1 360 280 37 9 chr20 24838694 24838801 -47315081 - Charlie8 DNA MER1_type -2244 173 64 1875 199 51 29 chr20 24838803 24839074 -47314808 + L1MC4 LINE L1 7474 7760 -282 2300 76 0 14 chr20 24839074 24839385 -47314497 + AluSx SINE Alu 1 307 0 1875 199 51 29 chr20 24839385 24839525 -47314357 + L1MC4 LINE L1 7760 7895 -147 267 140 0 0 chr20 24839532 24839582 -47314300 + (GA)n Simple_repeat Simple_repeat 1 50 0 328 115 0 0 chr20 24839599 24839651 -47314231 + L1MC4 LINE L1 7918 7969 -73 592 261 212 33 chr20 24840258 24840340 -47313542 - L2 LINE L2 -5 3308 3242 2405 101 0 0 chr20 24840340 24840646 -47313236 - AluSc SINE Alu -3 306 1 592 261 212 33 chr20 24840646 24840870 -47313012 - L2 LINE L2 -71 3242 2947 386 178 178 0 chr20 24841034 24841141 -47312741 - MER103 DNA DNA -36 130 5 320 309 24 52 chr20 24841708 24841886 -47311996 - MIR3 SINE MIR -64 144 2 2712 120 8 11 chr20 24842395 24842771 -47311111 + THE1C LTR MaLR 1 375 0 396 225 108 31 chr20 24843192 24843321 -47310561 + MIR SINE MIR 5 143 -119 2593 111 11 0 chr20 24843567 24843917 -47309965 + L1PA16 LINE L1 5804 6157 -9 3014 41 0 3 chr20 24844543 24844887 -47308995 + L1PA4 LINE L1 5810 6152 -3 351 0 0 0 chr20 24846615 24846654 -47307228 + (CAG)n Simple_repeat Simple_repeat 1 39 0 5293 103 18 8 chr20 24847554 24848321 -47305561 - L1PB2 LINE L1 0 6151 5377 220 269 0 0 chr20 24849375 24849427 -47304455 + GA-rich Low_complexity Low_complexity 2 53 0 377 268 66 102 chr20 24849939 24850032 -47303850 + L1MC4a LINE L1 5363 5458 -663 2464 89 0 0 chr20 24850032 24850334 -47303548 - AluSc SINE Alu -7 302 1 377 268 66 102 chr20 24850334 24850772 -47303110 + L1MC4a LINE L1 5458 5797 -324 725 303 46 8 chr20 24851968 24852229 -47301653 - L1M4 LINE L1 -2665 3481 3211 5169 145 64 14 chr20 24852728 24853584 -47300298 + MER4D LTR ERV1 5 903 0 673 223 32 81 chr20 24853660 24853907 -47299975 - L1ME1 LINE L1 -201 5965 5731 560 316 40 16 chr20 24854036 24854289 -47299593 - MIR SINE MIR 0 262 4 1101 235 152 24 chr20 24854482 24854983 -47298899 - MLT1G1 LTR MaLR -57 498 1 206 283 19 0 chr20 24857795 24857848 -47296034 - MIR SINE MIR -39 223 170 1690 152 13 13 chr20 24858061 24858377 -47295505 - MER33 DNA MER1_type -8 316 1 772 158 40 128 chr20 24858441 24858641 -47295241 - LTR37B LTR ERV1 0 468 301 2603 70 0 3 chr20 24858641 24858953 -47294929 + AluY SINE Alu 1 311 0 772 158 40 128 chr20 24858953 24859049 -47294833 - LTR37B LTR ERV1 -167 301 198 525 234 18 18 chr20 24860558 24860669 -47293213 + MER81 DNA DNA 1 111 -3 336 215 34 120 chr20 24861261 24861470 -47292412 - L1ME4a LINE L1 -6 6115 5925 2024 120 11 0 chr20 24861478 24861761 -47292121 + AluSx SINE Alu 1 286 -26 25 31 0 0 chr20 24861762 24861794 -47292088 + AT_rich Low_complexity Low_complexity 1 32 0 497 136 95 75 chr20 24861904 24862013 -47291869 + MER113 DNA MER1_type? 80 194 -327 2263 102 0 0 chr20 24862013 24862306 -47291576 + AluSc SINE Alu 1 293 -16 497 136 95 75 chr20 24862306 24862343 -47291539 + MER113 DNA MER1_type? 194 229 -292 490 88 75 0 chr20 24863263 24863410 -47290472 + (TA)n Simple_repeat Simple_repeat 1 158 0 1649 89 0 5 chr20 24863410 24863624 -47290258 - AluSc SINE Alu -26 283 71 743 124 107 0 chr20 24863634 24863755 -47290127 - AluSc SINE Alu -175 134 1 355 278 85 31 chr20 24863994 24864217 -47289665 - L1ME2 LINE L1 -2 6162 5928 7174 39 22 0 chr20 24864225 24865090 -47288792 - L1PA7 LINE L1 -2 6152 5269 406 280 155 18 chr20 24865670 24865838 -47288044 - L2 LINE L2 -861 2453 2263 435 275 141 39 chr20 24865862 24866251 -47287631 - L1MEd LINE L1 -1127 5002 4574 3706 173 71 27 chr20 24866318 24867012 -47286870 + MER44D DNA MER2_type 3 598 -7 745 290 139 55 chr20 24867027 24867847 -47286035 - L1MEd LINE L1 -1643 4486 3598 510 316 68 8 chr20 24868114 24868348 -47285534 + MER46C DNA MER2_type 90 337 -1 460 281 99 4 chr20 24868426 24868679 -47285203 - L1MEd LINE L1 -2884 3245 2969 424 209 83 57 chr20 24868679 24868888 -47284994 - MLT1G LTR MaLR 0 530 354 270 215 6 35 chr20 24868959 24869040 -47284842 - MLT1G LTR MaLR -280 275 200 309 221 26 13 chr20 24869061 24869138 -47284744 - MER96 DNA MER1_type? -1 174 97 812 292 36 23 chr20 24869373 24869859 -47284023 - L1MEd LINE L1 -3646 2483 2034 898 272 147 26 chr20 24869953 24870434 -47283448 - MLT1H1 LTR MaLR 0 555 26 1278 264 103 64 chr20 24870621 24871409 -47282473 - L1MEd LINE L1 -4574 1736 980 1881 128 0 4 chr20 24871409 24871682 -47282200 - AluSx SINE Alu -1 311 40 1278 264 103 64 chr20 24871682 24871703 -47282179 - L1MEd LINE L1 -5330 980 961 2295 82 13 10 chr20 24871703 24872007 -47281875 - AluSc SINE Alu -4 305 1 1278 264 103 64 chr20 24872007 24872409 -47281473 - L1MEd LINE L1 -5349 961 453 277 260 0 0 chr20 24872806 24872879 -47281003 - L1ME LINE L1 -506 5615 5543 1886 137 3 39 chr20 24873028 24873334 -47280548 + AluSx SINE Alu 1 295 -17 195 308 144 0 chr20 24873539 24873643 -47280239 + MIR SINE MIR 126 244 -18 274 346 0 0 chr20 24873663 24873741 -47280141 - MIR SINE MIR -160 102 25 2135 117 7 10 chr20 24873911 24874220 -47279662 - AluSx SINE Alu -4 308 1 310 258 97 0 chr20 24874928 24875021 -47278861 - MER103 DNA DNA -47 119 18 387 319 109 23 chr20 24875538 24875795 -47278087 + L1MEd LINE L1 565 843 -5573 * 683 246 142 25 chr20 24875784 24876215 -47277667 + L1MEd LINE L1 1069 1549 -4867 235 268 102 0 chr20 24876216 24876343 -47277539 + L1MEd LINE L1 1576 1715 -4711 961 251 19 0 chr20 24876345 24876560 -47277322 - MER58B DNA MER1_type 0 341 123 279 173 0 0 chr20 24876605 24876657 -47277225 + (TATATG)n Simple_repeat Simple_repeat 2 53 0 236 297 14 54 chr20 24876657 24876731 -47277151 - MER58 DNA MER1_type -310 76 6 302 296 46 9 chr20 24876746 24876854 -47277028 + L1MEd LINE L1 1586 1697 -4729 240 59 0 0 chr20 24877021 24877055 -47276827 + (A)n Simple_repeat Simple_repeat 1 34 0 21 0 0 0 chr20 24877243 24877264 -47276618 + AT_rich Low_complexity Low_complexity 1 21 0 1418 112 32 90 chr20 24877542 24877820 -47276062 + L1MC1 LINE L1 6072 6333 0 241 304 33 22 chr20 24877901 24877993 -47275889 - MIR SINE MIR -89 173 81 311 353 107 29 chr20 24879012 24879284 -47274598 - L2 LINE L2 -38 3234 2942 202 271 85 0 chr20 24879332 24879391 -47274491 - MIR SINE MIR -2 260 197 209 273 76 0 chr20 24879468 24879534 -47274348 + MIR SINE MIR 190 260 -2 1428 133 103 30 chr20 24879608 24879910 -47273972 - MER33 DNA MER1_type 0 324 1 2355 100 3 0 chr20 24880939 24881249 -47272633 + AluSx SINE Alu 1 311 -1 1614 170 67 0 chr20 24883554 24883866 -47270016 + MER2 DNA MER2_type 13 345 0 439 277 82 19 chr20 24883933 24884092 -47269790 + MIR SINE MIR 48 216 -46 752 188 235 6 chr20 24884101 24884271 -47269611 - MER82 DNA MER2_type 0 653 445 207 292 169 19 chr20 24884330 24884484 -47269398 + MIR SINE MIR 29 205 -57 487 220 0 0 chr20 24884501 24884592 -47269290 - MER82 DNA MER2_type -561 92 2 747 284 98 0 chr20 24884704 24884929 -47268953 - MIR SINE MIR -14 248 2 574 239 15 85 chr20 24885095 24885296 -47268586 - MIR SINE MIR -2 260 74 1573 164 20 8 chr20 24886179 24886429 -47267453 + AluJo SINE Alu 39 291 -21 1363 167 44 9 chr20 24886468 24886695 -47267187 + MER46A DNA MER2_type 1 235 -1 1060 263 93 36 chr20 24886695 24887216 -47266666 - L2 LINE L2 -502 2812 2259 189 278 9 102 chr20 24889611 24889719 -47264163 - L2 LINE L2 -76 3196 3099 194 61 0 30 chr20 24890211 24890244 -47263638 + (TTTAA)n Simple_repeat Simple_repeat 3 34 0 930 172 6 17 chr20 24890712 24890886 -47262996 - AluSg/x SINE Alu 0 310 139 2281 85 3 3 chr20 24892956 24893249 -47260633 - AluSc SINE Alu -16 293 1 256 236 309 39 chr20 24895212 24895390 -47258492 + MIR SINE MIR 31 256 -6 282 236 135 40 chr20 24895677 24895825 -47258057 + MER103 DNA DNA 2 163 -3 1485 127 131 12 chr20 24897131 24897383 -47256499 - AluSx SINE Alu -7 305 24 322 206 99 3 chr20 24898831 24898934 -47254948 - L1ME3A LINE L1 -201 5961 5852 472 291 136 8 chr20 24898986 24899348 -47254534 - L1ME3A LINE L1 -512 5650 5316 1852 256 137 86 chr20 24899357 24901074 -47252808 - L1ME3A LINE L1 -867 5279 3474 234 246 115 0 chr20 24901084 24901145 -47252737 + MER58 DNA MER1_type 36 103 -112 261 0 0 0 chr20 24901145 24901174 -47252708 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 301 263 79 0 chr20 24901178 24901254 -47252628 + MER58 DNA MER1_type 134 2420 0 547 270 78 45 chr20 24901273 24901422 -47252460 - L1ME3A LINE L1 -3558 2588 2445 2334 101 0 0 chr20 24901422 24901719 -47252163 - AluSx SINE Alu -13 299 3 547 270 78 45 chr20 24901719 24901943 -47251939 - L1ME3A LINE L1 -3701 2445 2203 959 153 7 0 chr20 24901963 24902113 -47251769 + AluSg/x SINE Alu 135 285 -25 301 145 0 29 chr20 24902324 24902393 -47251489 + (TATATG)n Simple_repeat Simple_repeat 4 70 0 1908 44 13 0 chr20 24902556 24902783 -47251099 - L1PA7 LINE L1 0 6154 5925 1930 244 103 0 chr20 24903314 24903811 -47250071 + MER119 DNA MER1_type 3 550 -33 245 322 74 27 chr20 24903867 24904016 -47249866 + MIR SINE MIR 31 186 -76 2106 131 3 3 chr20 24904735 24905033 -47248849 - AluSx SINE Alu -14 298 1 354 314 0 10 chr20 24905045 24905147 -47248735 + L2 LINE L2 3178 3278 -35 191 179 0 0 chr20 24905758 24905786 -47248096 + L2 LINE L2 3264 3291 -22 324 312 52 0 chr20 24906611 24906765 -47247117 - L1ME2 LINE L1 -278 5886 5725 1087 180 92 5 chr20 24906896 24907102 -47246780 - MER58A DNA MER1_type 0 224 1 604 275 56 30 chr20 24907153 24907386 -47246496 - L1ME2 LINE L1 -536 5585 5347 371 213 24 63 chr20 24907395 24907522 -47246360 + MLT1I LTR MaLR 281 402 -7 1907 62 3 98 chr20 24907727 24908032 -47245850 - AluSg SINE Alu -14 296 21 269 344 61 23 chr20 24908036 24908298 -47245584 + MLT1J LTR MaLR 200 471 -40 1488 200 165 28 chr20 24909380 24909840 -47244042 - Charlie1b DNA MER1_type 0 523 1 226 295 189 14 chr20 24910203 24910459 -47243423 + L2 LINE L2 1952 2303 -1011 358 287 208 18 chr20 24910459 24910792 -47243090 + L2 LINE L2 2740 3130 -183 305 309 31 0 chr20 24910824 24910921 -47242961 + Charlie1 DNA MER1_type 3 102 -2659 288 231 173 19 chr20 24910929 24911033 -47242849 + L2 LINE L2 3193 3312 -1 1813 179 0 3 chr20 24911172 24911469 -47242413 + AluJo SINE Alu 3 298 -14 382 303 135 11 chr20 24912137 24912315 -47241567 + MIR SINE MIR 31 230 -32 225 0 0 0 chr20 24912330 24912355 -47241527 + (TG)n Simple_repeat Simple_repeat 1 25 0 1931 297 19 6 chr20 24912446 24912985 -47240897 - MLT1H1 LTR MaLR 0 555 10 238 371 17 9 chr20 24913182 24913298 -47240584 - L3 LINE CR1 -561 1016 900 489 291 22 56 chr20 24913620 24913888 -47239994 + HAL1 LINE L1 2246 2504 -3 1146 114 0 0 chr20 24914547 24914806 -47239076 + (GGGGA)n Simple_repeat Simple_repeat 1 259 0 254 279 0 0 chr20 24914834 24914895 -47238987 + MER5A DNA MER1_type 9 69 -120 637 101 9 9 chr20 24915485 24915594 -47238288 + (GGAA)n Simple_repeat Simple_repeat 4 112 0 201 237 268 31 chr20 24915608 24915705 -47238177 + MER5A DNA MER1_type 63 182 -7 638 242 62 6 chr20 24915758 24915919 -47237963 + MER5B DNA MER1_type 3 172 -6 1357 134 65 9 chr20 24916086 24916302 -47237580 + MER30 DNA MER1_type 3 230 0 279 93 0 0 chr20 24917403 24917446 -47236436 + (TG)n Simple_repeat Simple_repeat 1 43 0 825 120 0 0 chr20 24918140 24918278 -47235604 - FLAM_A SINE Alu 0 148 11 1539 183 0 11 chr20 24919205 24919478 -47234404 - AluJo SINE Alu -18 294 25 199 208 21 21 chr20 24920032 24920080 -47233802 - MIR3 SINE MIR -3 205 158 545 287 188 81 chr20 24920612 24921054 -47232828 - L2 LINE L2 -1 3312 2824 736 157 239 0 chr20 24921086 24921245 -47232637 + MER3 DNA MER1_type 13 209 0 222 276 67 29 chr20 24921245 24921350 -47232532 - L2 LINE L2 -575 2739 2631 254 333 108 10 chr20 24921638 24921740 -47232142 - MIR SINE MIR -78 130 19 507 264 72 53 chr20 24923027 24923145 -47230737 - MIR SINE MIR -50 212 98 2539 105 19 35 chr20 24923145 24923515 -47230367 + THE1B LTR MaLR 1 364 0 13034 81 4 6 chr20 24923515 24925019 -47228863 + THE1B-int LTR MaLR 1 1503 -77 2313 109 3 0 chr20 24925019 24925321 -47228561 + AluSq SINE Alu 1 303 -10 13034 81 4 6 chr20 24925321 24925399 -47228483 + THE1B-int LTR MaLR 1503 1580 0 2753 82 19 25 chr20 24925399 24925765 -47228117 + THE1B LTR MaLR 1 364 0 507 264 72 53 chr20 24925765 24925852 -47228030 - MIR SINE MIR -163 99 1 333 298 42 46 chr20 24926095 24926268 -47227614 - MIR SINE MIR -18 190 9 21 36 0 0 chr20 24926816 24926844 -47227038 + AT_rich Low_complexity Low_complexity 1 28 0 790 223 108 52 chr20 24927719 24928006 -47225876 - MLT1J LTR MaLR -109 402 100 321 227 209 36 chr20 24928150 24928375 -47225507 - LTR33 LTR ERVL -2 519 256 602 244 157 28 chr20 24929037 24929254 -47224628 + MIR SINE MIR 18 262 0 32 26 0 0 chr20 24930692 24930731 -47223151 + AT_rich Low_complexity Low_complexity 1 39 0 441 268 18 31 chr20 24930886 24931110 -47222772 + L1MC5 LINE L1 7462 7682 -279 275 246 23 120 chr20 24932407 24932582 -47221300 - MER5B DNA MER1_type -1 177 20 388 261 14 70 chr20 24932409 24932551 -47221331 + MER5A DNA MER1_type 18 151 -38 823 162 13 13 chr20 24933288 24933442 -47220440 - MER5A DNA MER1_type -35 154 1 568 230 54 14 chr20 24933989 24934137 -47219745 - MER5A DNA MER1_type -35 154 1 433 249 55 50 chr20 24934511 24934692 -47219190 + LTR16C LTR ERVL 310 491 0 385 237 0 0 chr20 24936211 24936287 -47217595 - MER5A DNA MER1_type -99 90 15 185 94 31 0 chr20 24936339 24936371 -47217511 + CT-rich Low_complexity Low_complexity 2 34 0 21 0 0 0 chr20 24936388 24936409 -47217473 + AT_rich Low_complexity Low_complexity 1 21 0 2065 128 3 10 chr20 24937900 24938212 -47215670 + AluSx SINE Alu 1 310 -2 369 361 7 26 chr20 24939826 24939981 -47213901 - MER5A DNA MER1_type -31 158 7 1077 206 17 80 chr20 24939982 24940220 -47213662 - MER58A DNA MER1_type -1 223 1 21 0 0 0 chr20 24940328 24940349 -47213533 + AT_rich Low_complexity Low_complexity 1 21 0 245 286 13 39 chr20 24940961 24941038 -47212844 + L2 LINE L2 3232 3306 -7 202 186 23 0 chr20 24941323 24941366 -47212516 - L2 LINE L2 0 3313 3270 268 307 0 0 chr20 24941367 24941442 -47212440 + L1MEc LINE L1 1493 1567 -4829 362 307 166 24 chr20 24941947 24942236 -47211646 + MLT1K LTR MaLR 187 516 -72 352 197 15 153 chr20 24942236 24942373 -47211509 - MLT1H LTR MaLR -2 547 430 377 254 25 17 chr20 24942505 24942623 -47211259 - MLT1H LTR MaLR -396 153 35 783 89 10 0 chr20 24944056 24944157 -47209725 - AluSp/q SINE Alu -20 293 192 232 293 57 70 chr20 24944586 24944743 -47209139 + L2 LINE L2 3159 3313 0 3329 214 32 11 chr20 24946622 24947333 -47206549 + HsTC2c DNA Tc2 1 726 -3 2457 175 120 39 chr20 24948086 24948703 -47205179 - MER21B LTR ERV1 -54 809 143 392 221 11 74 chr20 24948866 24948961 -47204921 - MER21B LTR ERV1 -774 89 1 801 220 217 31 chr20 24949450 24949805 -47204077 - LTR54 LTR ERV1 -1 509 75 268 370 117 0 chr20 24949969 24950123 -47203759 - L2 LINE L2 -8 3305 3134 635 250 7 0 chr20 24950124 24950264 -47203618 - MLT1H LTR MaLR 0 549 409 2834 83 3 25 chr20 24950264 24950627 -47203255 - THE1A LTR MaLR 0 355 1 220 386 14 7 chr20 24950670 24950810 -47203072 - L2 LINE L2 -207 3065 2925 28 61 0 0 chr20 24952900 24952949 -47200933 + AT_rich Low_complexity Low_complexity 1 49 0 180 0 0 0 chr20 24954836 24954856 -47199026 + (GA)n Simple_repeat Simple_repeat 1 20 0 319 306 190 16 chr20 24955690 24955948 -47197934 + L2 LINE L2 3009 3311 -2 205 195 0 0 chr20 24956437 24956478 -47197404 + GA-rich Low_complexity Low_complexity 1 41 0 784 168 16 8 chr20 24957786 24957911 -47195971 - FLAM_C SINE Alu -16 127 2 313 292 69 14 chr20 24959386 24959530 -47194352 + L1ME LINE L1 5615 5766 -355 187 245 19 19 chr20 24960598 24960651 -47193231 + MIR SINE MIR 100 152 -110 3043 144 58 47 chr20 24961863 24961988 -47191894 + L1MB8 LINE L1 5545 5667 -511 182 36 0 36 chr20 24961988 24962016 -47191866 + (TA)n Simple_repeat Simple_repeat 2 28 0 3043 144 58 47 chr20 24962016 24962514 -47191368 + L1MB8 LINE L1 5667 6175 -3 400 231 86 65 chr20 24963306 24963492 -47190390 + MIR SINE MIR 3 192 -70 22 35 0 0 chr20 24963667 24963696 -47190186 + AT_rich Low_complexity Low_complexity 1 29 0 950 90 0 30 chr20 24965140 24965274 -47188608 + L1MA2 LINE L1 6175 6304 0 24 32 0 0 chr20 24965281 24965312 -47188570 + AT_rich Low_complexity Low_complexity 1 31 0 26 0 0 0 chr20 24966214 24966240 -47187642 + AT_rich Low_complexity Low_complexity 1 26 0 479 237 15 22 chr20 24967311 24967446 -47186436 + L1MC5 LINE L1 7739 7872 -89 887 200 186 7 chr20 24967446 24967721 -47186161 + MER5C DNA MER1_type 1 324 0 273 29 0 0 chr20 24969487 24969521 -47184361 + (CAA)n Simple_repeat Simple_repeat 1 34 0 329 276 24 0 chr20 24971093 24971220 -47182662 + (TG)n Simple_repeat Simple_repeat 1 130 0 282 248 261 13 chr20 24971220 24971377 -47182505 - L2 LINE L2 -36 3277 3082 1935 142 10 7 chr20 24972655 24972958 -47180924 - AluSx SINE Alu -8 304 1 298 253 134 100 chr20 24974179 24974846 -47179036 + HAL1 LINE L1 853 1558 -949 2094 113 0 3 chr20 24974846 24975129 -47178753 + AluSx SINE Alu 6 287 -25 298 253 134 100 chr20 24975129 24975324 -47178558 + HAL1 LINE L1 1558 1745 -762 764 298 57 3 chr20 24975338 24975637 -47178245 + L1M4 LINE L1 3875 4189 -1957 471 218 42 104 chr20 24975638 24975831 -47178051 + MLT1G1 LTR MaLR 1 181 -414 355 284 62 23 chr20 24975838 24976014 -47177868 + L1M4 LINE L1 4243 4425 -1721 351 235 143 31 chr20 24976030 24976226 -47177656 - LTR33 LTR ERVL 0 521 304 513 260 27 0 chr20 24976302 24976452 -47177430 - LTR33 LTR ERVL -354 167 14 23 0 0 0 chr20 24976639 24976662 -47177220 + AT_rich Low_complexity Low_complexity 1 23 0 343 289 72 62 chr20 24976757 24976965 -47176917 + L1M4 LINE L1 4771 4980 -1166 226 303 56 0 chr20 24977515 24977604 -47176278 - MIR SINE MIR -6 256 163 1843 156 21 0 chr20 24977605 24977919 -47175963 - AluSq SINE Alu 0 320 1 502 127 13 0 chr20 24977921 24978000 -47175882 - Charlie1a DNA MER1_type -1130 325 246 2684 176 64 103 chr20 24978010 24978672 -47175210 - L1MD1 LINE L1 -22 6220 5594 2150 90 35 0 chr20 24978672 24978982 -47174900 + AluSq SINE Alu 2 313 0 2684 176 64 103 chr20 24978982 24979121 -47174761 - L1MD1 LINE L1 -648 5594 5451 566 216 103 147 chr20 24979121 24979413 -47174469 - Charlie1a DNA MER1_type -1172 283 5 836 235 53 11 chr20 24979632 24979987 -47173895 + L1ME3A LINE L1 5709 6111 -59 307 218 69 10 chr20 24980964 24981065 -47172817 - L1ME4a LINE L1 -9 6112 6006 1625 237 70 84 chr20 24981176 24981818 -47172064 + MER45C DNA AcHobo 1 633 -320 325 204 0 0 chr20 24981814 24981868 -47172014 + MER45C DNA AcHobo 900 953 0 * 2974 193 11 2 chr20 24982217 24982750 -47171132 + L1MB7 LINE L1 5638 6175 -9 522 307 71 8 chr20 24982795 24983049 -47170833 + L1M4 LINE L1 2302 2571 -3575 900 263 92 22 chr20 24983158 24983515 -47170367 + L2 LINE L2 2367 2748 -566 358 71 89 0 chr20 24983545 24983601 -47170281 - Charlie4a DNA MER1_type -55 453 393 267 250 0 15 chr20 24983612 24983680 -47170202 - Charlie4a DNA MER1_type -203 305 239 326 211 28 174 chr20 24983685 24983903 -47169979 + L2 LINE L2 2761 2945 -368 842 263 88 30 chr20 24984121 24984460 -47169422 + L2 LINE L2 2955 3313 0 1296 177 25 22 chr20 24984940 24985217 -47168665 + MER33 DNA MER1_type 47 324 0 2045 144 0 22 chr20 24985294 24985613 -47168269 + AluSx SINE Alu 1 312 0 180 0 0 0 chr20 24985952 24985972 -47167910 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 485 230 35 35 chr20 24986144 24986257 -47167625 - L2 LINE L2 0 3272 3160 190 222 125 56 chr20 24986219 24986291 -47167591 - MER5A DNA MER1_type -106 83 7 * 225 0 0 0 chr20 24987454 24987479 -47166403 + (TG)n Simple_repeat Simple_repeat 2 26 0 430 189 18 0 chr20 24987479 24987590 -47166292 + (TA)n Simple_repeat Simple_repeat 2 114 0 5922 92 16 0 chr20 24987590 24988408 -47165474 - L1PA13 LINE L1 -10 6153 5323 1210 74 0 0 chr20 24988409 24988558 -47165324 - AluY SINE Alu -12 299 151 6460 163 16 3 chr20 24988560 24989711 -47164171 - L1PA13 LINE L1 -825 5321 4157 26 0 0 0 chr20 24990156 24990182 -47163700 + AT_rich Low_complexity Low_complexity 1 26 0 521 240 87 66 chr20 24990851 24991189 -47162693 + L2 LINE L2 2967 3311 -2 262 293 17 17 chr20 24991347 24991463 -47162419 + MLT1L LTR MaLR 490 605 -10 194 0 0 37 chr20 24991764 24991791 -47162091 + (TAAAA)n Simple_repeat Simple_repeat 3 28 0 6038 72 27 4 chr20 24991878 24992867 -47161015 - L1PA10 LINE L1 -5 6163 5174 2152 94 0 21 chr20 24992925 24993277 -47160605 + AluY SINE Alu 1 346 0 503 221 201 13 chr20 24993291 24993440 -47160442 - MER5A DNA MER1_type 0 189 13 5042 170 45 7 chr20 24995131 24996138 -47157744 + L1MC1 LINE L1 5283 6327 -6 1840 166 7 10 chr20 24996138 24996433 -47157449 + AluJb SINE Alu 1 294 -18 404 268 81 34 chr20 24996608 24996843 -47157039 + MLT1J LTR MaLR 22 267 -244 1424 236 56 11 chr20 24996898 24997347 -47156535 - Charlie4a DNA MER1_type -4 504 36 1015 213 60 24 chr20 24997625 24997874 -47156008 + MIR SINE MIR 1 258 -4 338 160 0 0 chr20 24998147 24998213 -47155669 - L1ME2 LINE L1 -9 6155 6097 303 304 37 43 chr20 24998272 24998433 -47155449 - L1M4 LINE L1 -778 5368 5209 307 342 97 59 chr20 24998542 24998779 -47155103 + L2 LINE L2 2988 3233 -39 30 0 0 0 chr20 24999192 24999222 -47154660 + AT_rich Low_complexity Low_complexity 1 30 0 338 139 0 14 chr20 25000070 25000142 -47153740 + MER3 DNA MER1_type 98 168 -41 * 1475 186 58 23 chr20 25000135 25000396 -47153486 + MER3 DNA MER1_type 2214 2495 -129 1439 174 74 11 chr20 25000396 25000666 -47153216 + AluJo SINE Alu 3 289 -23 1475 186 58 23 chr20 25000666 25000801 -47153081 + MER3 DNA MER1_type 2495 2624 0 392 233 14 86 chr20 25003621 25003653 -47150229 + MLT1K LTR MaLR 376 409 -179 2268 111 36 30 chr20 25003653 25004015 -47149867 + THE1B LTR MaLR 1 364 0 392 233 14 86 chr20 25004015 25004192 -47149690 + MLT1K LTR MaLR 409 570 -18 189 274 354 0 chr20 25004333 25004446 -47149436 - MER5A DNA MER1_type -36 153 1 1654 65 0 13 chr20 25004917 25005147 -47148735 + L1PA8 LINE L1 5939 6165 -7 496 262 121 46 chr20 25005548 25005937 -47147945 - HAL1 LINE L1 -10 2497 2080 238 270 32 95 chr20 25006105 25006231 -47147651 - HAL1 LINE L1 -726 1781 1664 2016 195 61 2 chr20 25006398 25006854 -47147028 + MLT1D LTR MaLR 23 505 0 257 296 53 68 chr20 25007223 25007429 -47146453 - HAL1 LINE L1 -2287 220 18 673 267 73 14 chr20 25007634 25007922 -47145960 - LTR16C LTR ERVL -2 489 185 519 228 93 26 chr20 25008701 25008894 -47144988 - LTR33 LTR ERVL -9 512 307 786 248 69 45 chr20 25009428 25009674 -47144208 + MIR SINE MIR 11 262 0 305 127 25 76 chr20 25009749 25009828 -47144054 - MADE1 DNA Mariner 0 80 6 975 271 21 27 chr20 25009849 25010225 -47143657 - L1ME1 LINE L1 -15 6220 5847 663 201 126 0 chr20 25010228 25010402 -47143480 - L1ME1 LINE L1 -657 5578 5383 4336 219 80 35 chr20 25010489 25010506 -47143376 - L1ME1 LINE L1 -800 5415 5400 2558 10 0 0 chr20 25010506 25010794 -47143088 - L1PA2 LINE L1 -5 6150 5863 4336 219 80 35 chr20 25010794 25011383 -47142499 - L1ME1 LINE L1 -815 5400 4839 1694 169 11 11 chr20 25011383 25011656 -47142226 + AluSx SINE Alu 1 273 -39 4336 219 80 35 chr20 25011656 25012582 -47141300 - L1ME1 LINE L1 -1376 4839 3812 812 81 40 8 chr20 25012585 25012709 -47141173 - L1PB1 LINE L1 0 6867 6740 16806 164 26 13 chr20 25012723 25016904 -47136978 - L1PB1 LINE L1 -395 6472 2186 2327 98 0 13 chr20 25016904 25017211 -47136671 - AluY SINE Alu -8 303 1 16806 164 26 13 chr20 25017211 25019425 -47134457 - L1PB1 LINE L1 -4681 2186 1 768 211 15 43 chr20 25019425 25019695 -47134187 - L1ME1 LINE L1 -2389 3826 2688 5836 148 13 24 chr20 25019836 25021991 -47131891 + L1PB2 LINE L1 4027 6149 -2 5192 246 102 28 chr20 25022775 25025244 -47128638 - L1ME1 LINE L1 -3526 2689 51 2139 132 13 7 chr20 25027535 25027845 -47126037 + AluSx SINE Alu 1 312 0 2976 17 3 0 chr20 25027862 25028220 -47125662 - L1PA3 LINE L1 -333 5822 5464 2877 32 0 3 chr20 25028220 25028560 -47125322 + L1PA3 LINE L1 5809 6152 -3 27 0 0 0 chr20 25028560 25028587 -47125295 + AT_rich Low_complexity Low_complexity 1 27 0 364 231 19 0 chr20 25028621 25028725 -47125157 - L1ME3 LINE L1 -114 6048 5943 585 244 23 17 chr20 25029390 25029562 -47124320 + MER69A DNA AcHobo 3 175 -2 21 0 0 0 chr20 25029625 25029646 -47124236 + AT_rich Low_complexity Low_complexity 1 21 0 466 287 145 18 chr20 25029667 25029949 -47123933 + L1M4 LINE L1 4590 4907 -1239 20229 123 43 8 chr20 25029950 25033262 -47120620 + L1M1 LINE L1 1 3429 -4136 189 245 20 20 chr20 25033262 25033311 -47120571 - L2 LINE L2 -1510 1804 1756 1670 194 101 44 chr20 25033377 25033851 -47120031 - MLT1D LTR MaLR 0 505 5 254 300 167 82 chr20 25033887 25034784 -47119098 + L2 LINE L2 2307 3272 0 578 259 112 58 chr20 25035218 25035496 -47118386 + MLT1H LTR MaLR 110 402 -147 979 270 80 20 chr20 25035697 25036389 -47117493 + L1MEc LINE L1 2173 2885 -3330 1939 153 11 21 chr20 25036430 25036809 -47117073 + L1MB1 LINE L1 5760 6134 -34 714 233 116 46 chr20 25036813 25037484 -47116398 + L1MEc LINE L1 2886 3603 -2612 * 5101 141 20 28 chr20 25037462 25038363 -47115519 + L1M3f LINE L1 2 895 -4433 374 177 21 42 chr20 25038362 25038458 -47115424 - L1MEc LINE L1 -6233 163 70 * 248 179 39 51 chr20 25038459 25038537 -47115345 + MER46C DNA MER2_type 262 338 0 274 253 21 32 chr20 25038553 25038648 -47115234 - Charlie7 DNA MER1_type -1973 639 546 233 305 42 8 chr20 25039179 25039297 -47114585 + LTR67 LTR ERVL 432 553 -4 448 288 182 28 chr20 25039313 25039516 -47114366 - Charlie7 DNA MER1_type -2084 528 358 2024 130 38 0 chr20 25039516 25039809 -47114073 + AluSx SINE Alu 1 304 -8 448 288 182 28 chr20 25039809 25040039 -47113843 - Charlie7 DNA MER1_type -2254 358 28 227 298 48 10 chr20 25040207 25040311 -47113571 + MIR SINE MIR 31 138 -70 433 231 11 0 chr20 25041617 25041708 -47112174 + MER3 DNA MER1_type 1 92 -117 421 311 0 16 chr20 25042463 25042585 -47111297 - MIR SINE MIR -115 147 28 283 260 20 10 chr20 25045201 25045301 -47108581 + (TG)n Simple_repeat Simple_repeat 1 101 0 234 0 0 0 chr20 25045470 25045496 -47108386 + (TC)n Simple_repeat Simple_repeat 1 26 0 * 288 0 0 0 chr20 25045495 25045527 -47108355 + (CA)n Simple_repeat Simple_repeat 1 32 0 315 319 22 15 chr20 25046788 25046923 -47106959 + HAL1b LINE L1 454 589 -759 1531 264 100 21 chr20 25046933 25047121 -47106761 + L1MEc LINE L1 4108 4280 -2048 2020 147 0 0 chr20 25047121 25047420 -47106462 - AluSx SINE Alu -13 299 1 1531 264 100 21 chr20 25047420 25047954 -47105928 + L1MEc LINE L1 4280 4887 -1441 1188 254 69 15 chr20 25047978 25048335 -47105547 + L1MEc LINE L1 5361 5697 -647 6487 133 73 36 chr20 25048335 25048894 -47104988 - Tigger3b DNA MER2_type -1797 1231 694 2311 112 0 3 chr20 25048894 25049206 -47104676 + AluSx SINE Alu 1 311 -1 6487 133 73 36 chr20 25049206 25049831 -47104051 - Tigger3b DNA MER2_type -2334 694 3 1188 254 69 15 chr20 25049831 25050131 -47103751 + L1MEc LINE L1 5697 6063 -281 360 327 0 0 chr20 25050287 25050397 -47103485 + MER58 DNA MER1_type 173 282 -2138 237 366 60 13 chr20 25050880 25051115 -47102767 - L3 LINE CR1 -19 1558 1313 198 238 24 0 chr20 25052422 25052464 -47101418 + L2 LINE L2 3226 3268 -4 251 211 78 70 chr20 25053075 25053203 -47100679 + L1ME4a LINE L1 6172 6300 -3 999 109 11 6 chr20 25053268 25053327 -47100555 + (GGAA)n Simple_repeat Simple_repeat 1 235 0 999 109 11 6 chr20 25053327 25053502 -47100380 + (GGAA)n Simple_repeat Simple_repeat 3 178 0 1014 87 6 27 chr20 25053625 25053808 -47100074 + (GGAA)n Simple_repeat Simple_repeat 1 179 0 2715 10 0 10 chr20 25054814 25055153 -47098729 - AluYb8 SINE Alu 0 318 1 2033 207 95 105 chr20 25056773 25057373 -47096509 + MLT1G LTR MaLR 2 590 0 423 263 165 31 chr20 25057724 25057918 -47095964 - MLT1J LTR MaLR -283 228 9 2152 208 61 42 chr20 25058176 25058225 -47095657 - MLT1F LTR MaLR -4 538 491 3725 147 12 7 chr20 25058225 25058811 -47095071 + L1MC1 LINE L1 5745 6333 0 2152 208 61 42 chr20 25058811 25059285 -47094597 - MLT1F LTR MaLR -51 491 5 246 213 53 40 chr20 25060549 25060624 -47093258 + MIR SINE MIR 71 146 -116 262 245 0 0 chr20 25061776 25061829 -47092053 - L2 LINE L2 -6 3307 3255 1031 160 10 36 chr20 25062272 25062466 -47091416 - MER3 DNA MER1_type -16 193 5 21 0 0 0 chr20 25062784 25062805 -47091077 + AT_rich Low_complexity Low_complexity 1 21 0 226 299 256 8 chr20 25063329 25063446 -47090436 - L2 LINE L2 0 3272 3127 251 229 86 0 chr20 25063590 25063660 -47090222 + L1MD2 LINE L1 462 537 -5993 1967 140 3 13 chr20 25063850 25064164 -47089718 - AluJb SINE Alu -1 311 1 2199 253 81 55 chr20 25064215 25065215 -47088667 + L1MD2 LINE L1 1369 2409 -4131 2327 71 0 0 chr20 25065215 25065549 -47088333 + AluY SINE Alu 1 334 0 2199 253 81 55 chr20 25065549 25065753 -47088129 + L1MD2 LINE L1 2409 2606 -3934 2505 204 109 12 chr20 25065753 25066322 -47087560 + MLT1E3 LTR MaLR 1 624 0 6358 229 60 46 chr20 25066324 25066843 -47087039 + L1MD2 LINE L1 2613 3123 -3417 2122 137 0 0 chr20 25066843 25067143 -47086739 - AluSx SINE Alu -12 300 1 6358 229 60 46 chr20 25067143 25068768 -47085114 + L1MD2 LINE L1 3123 4788 -1752 1595 234 137 17 chr20 25068772 25069298 -47084584 + L1MD2 LINE L1 5737 6325 -428 1701 224 63 27 chr20 25069338 25069785 -47084097 - MLT1C LTR MaLR -4 463 1 324 284 47 76 chr20 25069845 25070056 -47083826 - LTR33A LTR ERVL -317 206 2 2670 150 9 40 chr20 25070129 25070576 -47083306 + Tigger2a DNA MER2_type 1 433 -1 411 250 0 0 chr20 25070859 25070943 -47082939 + L2 LINE L2 3217 3300 -13 186 43 0 0 chr20 25070944 25070967 -47082915 + (TGAA)n Simple_repeat Simple_repeat 2 24 0 852 261 100 80 chr20 25071714 25072216 -47081666 + MLT1G3 LTR MaLR 8 595 0 311 304 109 0 chr20 25074707 25074845 -47079037 - MLT1I LTR MaLR -241 168 16 23 33 0 0 chr20 25074974 25075004 -47078878 + AT_rich Low_complexity Low_complexity 1 30 0 2046 153 3 0 chr20 25075113 25075421 -47078461 - AluSx SINE Alu -3 309 1 241 310 0 0 chr20 25076080 25076138 -47077744 + L2 LINE L2 3172 3229 -43 934 185 38 33 chr20 25076619 25076803 -47077079 + AluJo SINE Alu 1 185 -127 21 0 0 0 chr20 25077341 25077362 -47076520 + AT_rich Low_complexity Low_complexity 1 21 0 1763 158 54 0 chr20 25077362 25077641 -47076241 - AluSx SINE Alu -18 294 1 32 26 0 0 chr20 25077675 25077714 -47076168 + AT_rich Low_complexity Low_complexity 1 39 0 1583 170 11 14 chr20 25078480 25078756 -47075126 - AluJo SINE Alu -3 309 35 1719 170 34 7 chr20 25078828 25079122 -47074760 + AluSx SINE Alu 1 302 -10 21 36 0 0 chr20 25079678 25079706 -47074176 + AT_rich Low_complexity Low_complexity 1 28 0 462 234 128 48 chr20 25079788 25079976 -47073906 - MIR SINE MIR -57 205 3 2062 128 0 0 chr20 25080128 25080409 -47073473 + AluSx SINE Alu 1 281 -31 233 182 0 0 chr20 25080409 25080453 -47073429 + L1MC4 LINE L1 6660 6703 -1339 21 36 0 0 chr20 25080464 25080492 -47073390 + AT_rich Low_complexity Low_complexity 1 28 0 244 171 0 133 chr20 25080530 25080635 -47073247 + L1MC4 LINE L1 6613 6703 -1339 270 0 0 0 chr20 25080652 25080682 -47073200 + (TA)n Simple_repeat Simple_repeat 1 30 0 1587 123 139 57 chr20 25081851 25082168 -47071714 + MER61A LTR ERV1 1 343 0 556 256 177 39 chr20 25082859 25083062 -47070820 - MIR SINE MIR -9 253 23 285 260 0 41 chr20 25083300 25083373 -47070509 - L2 LINE L2 -1 3271 3202 828 177 32 65 chr20 25084759 25084903 -47068979 + MER58A DNA MER1_type 45 183 -2237 1750 150 0 0 chr20 25084903 25085156 -47068726 - AluJb SINE Alu -25 287 35 828 177 32 65 chr20 25085156 25085197 -47068685 + MER58A DNA MER1_type 183 224 0 398 270 34 25 chr20 25085483 25085656 -47068226 + L1 LINE L1 3597 3777 -2369 40 67 0 0 chr20 25085769 25085844 -47068038 + AT_rich Low_complexity Low_complexity 1 75 0 21 36 0 0 chr20 25086426 25086454 -47067428 + AT_rich Low_complexity Low_complexity 1 28 0 1699 214 52 87 chr20 25087043 25087698 -47066184 - MLT1G3 LTR MaLR 0 530 1 560 326 135 17 chr20 25087771 25088127 -47065755 - Charlie8 DNA MER1_type -1925 492 95 247 242 0 32 chr20 25089948 25090010 -47063872 + MLT1J LTR MaLR 2 61 -450 626 231 71 53 chr20 25090130 25090227 -47063655 + MLT1J LTR MaLR 238 332 -179 1853 135 9 64 chr20 25090227 25090554 -47063328 + AluJb SINE Alu 1 309 -3 626 231 71 53 chr20 25090554 25090681 -47063201 + MLT1J LTR MaLR 332 466 -45 384 346 27 18 chr20 25090818 25091006 -47062876 + MIR SINE MIR 16 203 -59 387 332 32 45 chr20 25091062 25091309 -47062573 - L3 LINE CR1 -132 1445 1202 480 321 66 64 chr20 25091959 25092159 -47061723 - HAL1b LINE L1 -500 1688 1490 2349 101 10 0 chr20 25092159 25092467 -47061415 - AluSx SINE Alu -1 311 1 480 321 66 64 chr20 25092467 25092779 -47061103 - HAL1b LINE L1 -698 1490 387 324 0 0 0 chr20 25093365 25093401 -47060481 + (TG)n Simple_repeat Simple_repeat 1 36 0 390 221 11 74 chr20 25193955 25194050 -46959832 + MER21B LTR ERV1 1 89 -774 2487 175 120 39 chr20 25194213 25194830 -46959052 + MER21B LTR ERV1 143 809 -54 3302 214 32 11 chr20 25195583 25196294 -46957588 - HsTC2c DNA Tc2 -3 726 1 195 229 0 83 chr20 25198234 25198330 -46955552 - L2 LINE L2 -67 3246 3159 743 89 10 0 chr20 25198759 25198860 -46955022 + AluSp/q SINE Alu 192 293 -20 380 254 25 17 chr20 25200293 25200411 -46953471 + MLT1H LTR MaLR 35 153 -396 352 197 15 153 chr20 25200543 25200680 -46953202 + MLT1J LTR MaLR 430 547 -2 * 355 307 166 24 chr20 25200680 25200969 -46952913 - MLT1K LTR MaLR -72 516 187 267 307 0 0 chr20 25201474 25201549 -46952333 - L1MEc LINE L1 -4829 1567 1493 190 186 23 0 chr20 25201550 25201593 -46952289 + L2 LINE L2 3270 3313 0 223 286 13 39 chr20 25201878 25201955 -46951927 - L2 LINE L2 -7 3306 3232 21 0 0 0 chr20 25202567 25202588 -46951294 + AT_rich Low_complexity Low_complexity 1 21 0 1013 206 17 80 chr20 25202696 25202934 -46950948 + MER58A DNA MER1_type 1 223 -1 329 345 9 9 chr20 25202974 25203090 -46950792 + MER5A DNA MER1_type 43 158 -31 2091 128 3 10 chr20 25204704 25205016 -46948866 - AluSx SINE Alu -2 310 1 21 0 0 0 chr20 25206507 25206528 -46947354 + AT_rich Low_complexity Low_complexity 1 21 0 185 94 31 0 chr20 25206545 25206577 -46947305 + GA-rich Low_complexity Low_complexity 2 34 0 360 237 0 0 chr20 25206629 25206705 -46947177 + MER5A DNA MER1_type 15 90 -99 435 238 61 55 chr20 25208224 25208405 -46945477 - LTR16C LTR ERVL 0 491 310 520 230 54 14 chr20 25208779 25208927 -46944955 + MER5A DNA MER1_type 1 154 -35 769 162 13 13 chr20 25209474 25209628 -46944254 + MER5A DNA MER1_type 1 154 -35 342 261 14 70 chr20 25210365 25210507 -46943375 - MER5A DNA MER1_type -38 151 18 432 268 18 31 chr20 25211806 25212030 -46941852 - L1MC5 LINE L1 -279 7682 7462 32 26 0 0 chr20 25212185 25212224 -46941658 + AT_rich Low_complexity Low_complexity 1 39 0 537 244 157 28 chr20 25213662 25213879 -46940003 - MIR SINE MIR 0 262 18 190 288 114 23 chr20 25214220 25214352 -46939530 - L2 LINE L2 -909 2405 2262 336 227 209 36 chr20 25214541 25214766 -46939116 + LTR33 LTR ERVL 256 519 -2 799 223 108 52 chr20 25214910 25215197 -46938685 + MLT1J LTR MaLR 100 402 -109 21 36 0 0 chr20 25216072 25216100 -46937782 + AT_rich Low_complexity Low_complexity 1 28 0 291 313 48 29 chr20 25216648 25216808 -46937074 + MIR SINE MIR 9 179 -29 451 255 82 62 chr20 25217064 25217151 -46936731 + MIR SINE MIR 1 85 -177 2609 82 19 25 chr20 25217151 25217517 -46936365 - THE1B LTR MaLR 0 364 1 12407 81 4 6 chr20 25217517 25217595 -46936287 - THE1B-int LTR MaLR 0 1580 1503 2326 109 3 0 chr20 25217595 25217897 -46935985 - AluSq SINE Alu -10 303 1 12407 81 4 6 chr20 25217897 25219401 -46934481 - THE1B-int LTR MaLR -77 1503 1 2401 108 19 35 chr20 25219401 25219771 -46934111 - THE1B LTR MaLR 0 364 1 451 255 82 62 chr20 25219771 25219889 -46933993 + MIR SINE MIR 84 212 -50 225 333 108 10 chr20 25221176 25221278 -46932604 + MIR SINE MIR 19 130 -78 211 277 75 11 chr20 25221566 25221660 -46932222 + L2 LINE L2 2631 2730 -584 734 157 239 0 chr20 25221671 25221830 -46932052 - MER3 DNA MER1_type 0 209 13 427 287 188 81 chr20 25221862 25222304 -46931578 + L2 LINE L2 2824 3312 -1 185 292 0 0 chr20 25222836 25222884 -46930998 + MIR3 SINE MIR 158 205 -3 1549 183 0 11 chr20 25223438 25223711 -46930171 + AluJo SINE Alu 25 294 -18 836 120 0 0 chr20 25224638 25224776 -46929106 + FLAM_A SINE Alu 11 148 0 279 93 0 0 chr20 25225470 25225513 -46928369 + (CA)n Simple_repeat Simple_repeat 1 43 0 1282 134 65 9 chr20 25226614 25226830 -46927052 - MER30 DNA MER1_type 0 230 3 588 242 62 6 chr20 25226997 25227158 -46926724 - MER5B DNA MER1_type -6 172 3 184 264 38 0 chr20 25227211 25227264 -46926618 - MER5A DNA MER1_type -7 182 128 637 101 9 9 chr20 25227322 25227431 -46926451 + (TTCC)n Simple_repeat Simple_repeat 4 112 0 236 279 0 0 chr20 25228021 25228082 -46925800 - MER5A DNA MER1_type -120 69 9 754 116 14 14 chr20 25228109 25228247 -46925635 + (TCCCC)n Simple_repeat Simple_repeat 4 141 0 481 291 22 56 chr20 25228906 25229174 -46924708 - HAL1 LINE L1 -3 2504 2246 214 371 17 9 chr20 25229496 25229612 -46924270 + L3 LINE CR1 900 1016 -561 1947 297 19 6 chr20 25229809 25230348 -46923534 + MLT1H1 LTR MaLR 10 555 0 306 0 0 0 chr20 25230439 25230473 -46923409 + (CA)n Simple_repeat Simple_repeat 1 34 0 388 332 51 56 chr20 25231059 25231371 -46922511 + HAL1b LINE L1 387 652 -696 2377 97 10 0 chr20 25231371 25231680 -46922202 + AluSx SINE Alu 1 312 0 388 332 51 56 chr20 25231680 25231877 -46922005 + HAL1b LINE L1 652 848 -500 328 332 32 45 chr20 25232527 25232774 -46921108 + L3 LINE CR1 1202 1445 -132 344 341 29 18 chr20 25232830 25233000 -46920882 - MIR SINE MIR -59 203 32 625 231 71 53 chr20 25233155 25233282 -46920600 - MLT1J LTR MaLR -45 466 332 1843 136 9 65 chr20 25233282 25233606 -46920276 - AluJb SINE Alu -6 306 1 625 231 71 53 chr20 25233606 25233703 -46920179 - MLT1J LTR MaLR -179 332 238 250 242 0 32 chr20 25233823 25233885 -46919997 - MLT1J LTR MaLR -450 61 2 561 321 131 22 chr20 25235692 25236059 -46917823 + Charlie8 DNA MER1_type 86 492 -1925 1716 216 66 66 chr20 25236132 25236787 -46917095 + MLT1G3 LTR MaLR 1 555 0 21 36 0 0 chr20 25237373 25237401 -46916481 + AT_rich Low_complexity Low_complexity 1 28 0 40 67 0 0 chr20 25237983 25238058 -46915824 + AT_rich Low_complexity Low_complexity 1 75 0 393 270 34 25 chr20 25238171 25238344 -46915538 - L1 LINE L1 -2369 3777 3597 819 177 32 65 chr20 25238630 25238671 -46915211 - MER58A DNA MER1_type -2196 224 183 1771 150 0 0 chr20 25238671 25238924 -46914958 + AluJb SINE Alu 35 287 -25 819 177 32 65 chr20 25238924 25239068 -46914814 - MER58A DNA MER1_type -2237 183 45 261 260 0 41 chr20 25240454 25240527 -46913355 + L2 LINE L2 3202 3271 -1 495 256 177 39 chr20 25240765 25240968 -46912914 + MIR SINE MIR 23 253 -9 1485 123 139 57 chr20 25241659 25241976 -46911906 - MER61A LTR ERV1 0 343 1 226 278 0 0 chr20 25243146 25243236 -46910646 - L1MC4 LINE L1 -1339 6703 6614 253 270 22 0 chr20 25243246 25243335 -46910547 - L1MC4 LINE L1 -1339 6703 6613 21 36 0 0 chr20 25243373 25243401 -46910481 + AT_rich Low_complexity Low_complexity 1 28 0 226 182 0 0 chr20 25243412 25243456 -46910426 - L1MC4 LINE L1 -1339 6703 6660 2114 125 0 0 chr20 25243456 25243737 -46910145 - AluSx SINE Alu -31 281 1 405 234 128 48 chr20 25243889 25244077 -46909805 + MIR SINE MIR 3 205 -57 21 36 0 0 chr20 25244159 25244187 -46909695 + AT_rich Low_complexity Low_complexity 1 28 0 1705 172 34 7 chr20 25244743 25245034 -46908848 - AluSx SINE Alu -13 299 1 1594 170 11 14 chr20 25245106 25245382 -46908500 + AluJo SINE Alu 35 309 -3 32 26 0 0 chr20 25246148 25246187 -46907695 + AT_rich Low_complexity Low_complexity 1 39 0 1750 161 54 0 chr20 25246221 25246500 -46907382 + AluSx SINE Alu 1 294 -18 26 0 0 0 chr20 25246500 25246526 -46907356 + AT_rich Low_complexity Low_complexity 1 26 0 930 183 38 43 chr20 25247064 25247250 -46906632 - AluJo SINE Alu -127 185 1 217 293 0 0 chr20 25247731 25247789 -46906093 - L2 LINE L2 -43 3229 3172 2069 149 3 0 chr20 25248448 25248756 -46905126 + AluSx SINE Alu 1 309 -3 23 33 0 0 chr20 25248865 25248895 -46904987 + AT_rich Low_complexity Low_complexity 1 30 0 315 304 109 0 chr20 25249024 25249162 -46904720 + MLT1I LTR MaLR 16 168 -241 858 261 100 80 chr20 25251657 25252159 -46901723 - MLT1G3 LTR MaLR 0 595 8 186 43 0 0 chr20 25252906 25252929 -46900953 + (TTCA)n Simple_repeat Simple_repeat 2 24 0 383 250 0 0 chr20 25252930 25253014 -46900868 - L2 LINE L2 -13 3300 3217 2566 148 9 40 chr20 25253297 25253744 -46900138 - Tigger2a DNA MER2_type -1 433 1 321 284 47 76 chr20 25253817 25254028 -46899854 + LTR33A LTR ERVL 2 206 -317 1601 221 63 27 chr20 25254088 25254535 -46899347 + MLT1C LTR MaLR 1 463 -4 2078 198 136 11 chr20 25254581 25255111 -46898771 - L1ME2 LINE L1 -240 6318 5723 * 6188 229 60 46 chr20 25255105 25256730 -46897152 - L1ME2 LINE L1 -1752 4788 3123 2117 141 0 0 chr20 25256730 25257029 -46896853 + AluSx SINE Alu 1 299 -13 6188 229 60 46 chr20 25257029 25257548 -46896334 - L1ME2 LINE L1 -3417 3123 2613 2505 204 109 12 chr20 25257550 25258119 -46895763 - MLT1E3 LTR MaLR 0 624 1 2112 256 80 54 chr20 25258119 25258323 -46895559 - L1ME2 LINE L1 -3934 2606 2409 2343 71 0 0 chr20 25258323 25258632 -46895250 - AluY SINE Alu 0 309 1 2112 256 80 54 chr20 25258632 25259632 -46894250 - L1ME2 LINE L1 -4131 2409 1369 1994 137 3 13 chr20 25259683 25259997 -46893885 + AluJb SINE Alu 1 311 -1 247 229 86 0 chr20 25260189 25260259 -46893623 - L1ME2 LINE L1 -5993 537 462 192 299 256 8 chr20 25260403 25260520 -46893362 + L2 LINE L2 3127 3272 0 21 0 0 0 chr20 25261044 25261065 -46892817 + AT_rich Low_complexity Low_complexity 1 21 0 1027 160 10 36 chr20 25261383 25261577 -46892305 + MER3 DNA MER1_type 5 193 -16 247 245 0 0 chr20 25262020 25262073 -46891809 + L2 LINE L2 3255 3307 -6 222 213 53 40 chr20 25263225 25263300 -46890582 - MIR SINE MIR -116 146 71 2171 208 61 42 chr20 25264565 25265039 -46888843 + MLT1F LTR MaLR 5 491 -51 3560 147 12 7 chr20 25265039 25265625 -46888257 - L1MC1 LINE L1 0 6333 5745 2171 208 61 42 chr20 25265625 25265674 -46888208 + MLT1F LTR MaLR 491 538 -4 420 255 99 37 chr20 25265932 25266093 -46887789 + MLT1J LTR MaLR 9 179 -332 2049 207 95 105 chr20 25266477 25267077 -46886805 - MLT1G LTR MaLR 0 590 2 2750 10 0 10 chr20 25268697 25269036 -46884846 + AluYb8 SINE Alu 1 318 0 195 42 0 0 chr20 25269864 25269888 -46883994 + (CCTG)n Simple_repeat Simple_repeat 1 24 0 794 184 6 0 chr20 25269888 25270062 -46883820 + CT-rich Low_complexity Low_complexity 1 175 0 1014 111 6 11 chr20 25270067 25270247 -46883635 + (TTCC)n Simple_repeat Simple_repeat 1 179 0 1011 109 11 6 chr20 25270248 25270366 -46883516 + (TTCC)n Simple_repeat Simple_repeat 1 294 0 1011 109 11 6 chr20 25270366 25270541 -46883341 + (TTCC)n Simple_repeat Simple_repeat 3 178 0 248 203 78 70 chr20 25270661 25270789 -46883093 - L1ME4a LINE L1 -3 6118 5990 185 238 24 0 chr20 25271400 25271442 -46882440 - L2 LINE L2 -4 3268 3226 223 364 34 0 chr20 25272866 25272984 -46880898 + L3 LINE CR1 1437 1558 -19 359 327 0 0 chr20 25273467 25273577 -46880305 - MER58 DNA MER1_type -2138 282 173 1200 252 69 15 chr20 25273733 25274033 -46879849 - L1ME3A LINE L1 -281 5881 5599 6147 136 73 35 chr20 25274033 25274658 -46879224 + Tigger3b DNA MER2_type 3 603 -2425 2301 115 0 3 chr20 25274658 25274970 -46878912 - AluSx SINE Alu -1 311 1 6147 136 73 35 chr20 25274970 25275529 -46878353 + Tigger3b DNA MER2_type 603 1231 0 1200 252 69 15 chr20 25275529 25275886 -46877996 - L1ME3A LINE L1 -563 5599 5179 1484 263 100 21 chr20 25275910 25276444 -46877438 - L1ME3A LINE L1 -1441 4705 4098 2044 147 0 0 chr20 25276444 25276743 -46877139 + AluSx SINE Alu 1 299 -13 1484 263 100 21 chr20 25276743 25276931 -46876951 - L1ME3A LINE L1 -2048 4098 3926 310 319 22 15 chr20 25276941 25277076 -46876806 - HAL1b LINE L1 -759 589 454 306 0 0 0 chr20 25278337 25278371 -46875511 + (TG)n Simple_repeat Simple_repeat 1 34 0 216 0 0 0 chr20 25278370 25278394 -46875488 + (GA)n Simple_repeat Simple_repeat 1 24 0 * 283 260 20 10 chr20 25278557 25278657 -46875225 + (CA)n Simple_repeat Simple_repeat 1 101 0 383 307 7 2 chr20 25281269 25281397 -46872485 + MIR SINE MIR 20 150 -58 436 231 11 0 chr20 25282150 25282241 -46871641 - MER3 DNA MER1_type -117 92 1 202 298 48 10 chr20 25283547 25283651 -46870231 - MIR SINE MIR -70 138 31 568 307 176 19 chr20 25283819 25284048 -46869834 + Charlie7 DNA MER1_type 28 220 -2392 2047 126 38 0 chr20 25284048 25284341 -46869541 - AluSx SINE Alu -8 304 1 568 307 176 19 chr20 25284341 25284544 -46869338 + Charlie7 DNA MER1_type 220 528 -2084 280 305 42 8 chr20 25284560 25284678 -46869204 - LTR67 LTR ERVL -4 553 432 316 253 21 32 chr20 25285209 25285304 -46868578 + Charlie7 DNA MER1_type 546 639 -1973 281 179 39 51 chr20 25285320 25285398 -46868484 - MER46C DNA MER2_type 0 338 262 4478 235 74 47 chr20 25285399 25286864 -46867018 + L1MEc LINE L1 70 1573 -4823 1425 196 61 77 chr20 25287072 25287450 -46866432 + MLT1A2 LTR MaLR 1 372 -2 2507 153 30 35 chr20 25287749 25288162 -46865720 - MSTB2 LTR MaLR 0 457 45 1667 180 0 26 chr20 25288162 25288467 -46865415 + AluJb SINE Alu 4 300 -12 2507 153 30 35 chr20 25288467 25288512 -46865370 - MSTB2 LTR MaLR -412 45 1 200 57 0 29 chr20 25288576 25288611 -46865271 + (TTA)n Simple_repeat Simple_repeat 3 36 0 12547 27 0 1 chr20 25288611 25290813 -46863069 - L1PA3 LINE L1 -18 6137 3937 1071 90 0 0 chr20 25290813 25290946 -46862936 + AluSg/x SINE Alu 155 287 -23 2149 108 11 0 chr20 25290953 25291231 -46862651 - AluSx SINE Alu -31 281 1 238 367 50 0 chr20 25291232 25291352 -46862530 + MIR SINE MIR 90 215 -47 274 173 39 0 chr20 25292468 25292520 -46861362 - MLT1K LTR MaLR -1 587 534 737 231 12 0 chr20 25293247 25293416 -46860466 + HAL1 LINE L1 1422 1592 -915 2257 100 162 5 chr20 25293419 25293789 -46860093 + MSTA LTR MaLR 1 428 0 1072 231 88 63 chr20 25293819 25294377 -46859505 + L1MC5 LINE L1 7119 7690 -271 589 52 104 0 chr20 25294381 25294592 -46859290 + (TA)n Simple_repeat Simple_repeat 1 232 0 578 203 122 40 chr20 25294592 25294814 -46859068 + L1MC5 LINE L1 7678 7917 -44 502 247 161 36 chr20 25294975 25295311 -46858571 + HAL1 LINE L1 1927 2304 -203 * 562 173 0 58 chr20 25295285 25295424 -46858458 + L1MC5 LINE L1 7730 7860 -101 2192 225 23 21 chr20 25295830 25296369 -46857513 + MLT1G LTR MaLR 10 553 -2 303 336 17 9 chr20 25297389 25297505 -46856377 - Tigger8 DNA MER2_type -2 664 548 462 290 118 42 chr20 25297861 25298154 -46855728 - L1ME4a LINE L1 -209 5912 5648 517 254 176 51 chr20 25298338 25299037 -46854845 - L1MC2 LINE L1 -180 5941 5209 376 58 87 14 chr20 25299041 25299110 -46854772 - L1MC2 LINE L1 -7 6337 6264 383 172 0 0 chr20 25299111 25299175 -46854707 + FLAM SINE Alu 65 128 -5 4431 143 76 21 chr20 25299175 25300019 -46853863 - L1MC2 LINE L1 -67 6277 5388 23 33 0 0 chr20 25300025 25300055 -46853827 + AT_rich Low_complexity Low_complexity 1 30 0 419 228 141 0 chr20 25300057 25300149 -46853733 - FLAM_A SINE Alu -34 108 4 764 288 116 54 chr20 25300152 25301402 -46852480 - L1MC2 LINE L1 -760 5386 4060 346 103 0 0 chr20 25301799 25301857 -46852025 + Alu SINE Alu 245 302 0 263 193 0 7 chr20 25302153 25302214 -46851668 - L2 LINE L2 -365 2907 2852 1706 190 21 7 chr20 25302484 25302963 -46850919 + L1M2 LINE L1 5032 5515 -751 376 240 100 33 chr20 25302969 25303119 -46850763 + MER90 LTR ERV1 454 613 -1 378 329 19 32 chr20 25303563 25303721 -46850161 + L2 LINE L2 2634 2789 -525 1336 183 25 40 chr20 25304129 25304389 -46849493 - MER33 DNA MER1_type -2261 324 68 1870 141 3 7 chr20 25304389 25304695 -46849187 - AluSx SINE Alu -7 305 1 1336 183 25 40 chr20 25304695 25304756 -46849126 - MER33 DNA MER1_type -2517 68 8 268 216 54 68 chr20 25304782 25304856 -46849026 + MIR3 SINE MIR 115 187 -21 1376 204 33 60 chr20 25304954 25305352 -46848530 - L1MC4 LINE L1 -661 7381 6995 27 0 0 0 chr20 25305558 25305585 -46848297 + AT_rich Low_complexity Low_complexity 1 27 0 1520 159 24 30 chr20 25306678 25306973 -46846909 - AluJo SINE Alu -19 293 1 618 309 14 24 chr20 25307263 25307470 -46846412 - MIR SINE MIR 0 262 58 2127 114 0 0 chr20 25308185 25308483 -46845399 - AluSx SINE Alu -14 298 1 1111 297 104 14 chr20 25309408 25309849 -46844033 + MLT1J LTR MaLR 28 508 -3 629 289 64 0 chr20 25309932 25310136 -46843746 + MIR SINE MIR 9 225 -37 1484 156 78 21 chr20 25310415 25310697 -46843185 + AluJo SINE Alu 1 298 -14 1368 85 0 4 chr20 25311287 25311747 -46842135 + (TGGA)n Simple_repeat Simple_repeat 1 458 0 24 0 0 0 chr20 25313305 25313329 -46840553 + AT_rich Low_complexity Low_complexity 1 24 0 1728 112 0 89 chr20 25313520 25313833 -46840049 - AluJo SINE Alu -11 301 17 463 144 0 44 chr20 25314405 25314495 -46839387 + L1MC2 LINE L1 5975 6060 -284 216 344 0 0 chr20 25316848 25316909 -46836973 - MIR SINE MIR -96 166 106 2229 91 13 0 chr20 25316916 25317223 -46836659 - AluSx SINE Alu -1 311 1 5885 137 15 16 chr20 25318469 25319477 -46834405 + L1MA3 LINE L1 5293 6304 -1 1722 122 0 4 chr20 25319705 25319951 -46833931 + AluSq SINE Alu 1 245 -68 216 0 0 0 chr20 25319951 25319975 -46833907 + (T)n Simple_repeat Simple_repeat 1 24 0 817 158 0 0 chr20 25320088 25320221 -46833661 + AluSg/x SINE Alu 154 286 -23 2079 116 0 0 chr20 25320225 25320510 -46833372 + AluY SINE Alu 1 285 -26 2212 100 0 3 chr20 25320525 25320826 -46833056 + AluSq SINE Alu 1 300 -13 8244 223 51 22 chr20 25320999 25321943 -46831939 + L1M4 LINE L1 2427 3342 -2804 2238 100 0 0 chr20 25321943 25322244 -46831638 + AluSg SINE Alu 1 301 -9 8244 223 51 22 chr20 25322244 25322696 -46831186 + L1M4 LINE L1 3342 3779 -2367 1926 157 0 6 chr20 25322696 25323009 -46830873 + AluSx SINE Alu 1 311 -1 8244 223 51 22 chr20 25323009 25323472 -46830410 + L1M4 LINE L1 3779 4227 -1919 2318 169 39 10 chr20 25323472 25323886 -46829996 - MSTB LTR MaLR 0 426 1 8244 223 51 22 chr20 25323886 25324363 -46829519 + L1M4 LINE L1 4227 4834 -1312 4949 147 34 30 chr20 25324369 25324637 -46829245 + L1MB5 LINE L1 3873 4138 -2036 2150 123 0 0 chr20 25324637 25324947 -46828935 + AluSx SINE Alu 1 310 -2 4949 147 34 30 chr20 25324947 25325589 -46828293 + L1MB5 LINE L1 4138 4776 -1398 2118 93 31 3 chr20 25325589 25325878 -46828004 + AluSq SINE Alu 1 297 -16 4949 147 34 30 chr20 25325878 25326312 -46827570 + L1MB5 LINE L1 4776 5890 -284 1506 120 74 79 chr20 25326312 25326754 -46827128 - THE1C LTR MaLR 0 375 1 3012 138 9 80 chr20 25326754 25327390 -46826492 + L1MA8 LINE L1 4768 5358 -788 2928 133 67 64 chr20 25327390 25327996 -46825886 + MER6A DNA MER2_type -5 586 -19 3348 144 28 31 chr20 25328002 25328516 -46825366 + L1MA8 LINE L1 5369 5882 -409 1968 125 20 3 chr20 25328516 25328811 -46825071 + AluSx SINE Alu 1 300 -12 3348 144 28 31 chr20 25328811 25328908 -46824974 + L1MA8 LINE L1 5882 5978 -313 275 256 111 0 chr20 25333043 25333160 -46820722 + L1MC4 LINE L1 7912 8041 -1 34 0 0 0 chr20 25333377 25333411 -46820471 + AT_rich Low_complexity Low_complexity 1 34 0 2162 109 3 0 chr20 25333415 25333727 -46820155 + AluSp SINE Alu 1 313 0 1748 163 56 0 chr20 25333785 25334105 -46819777 + L1MB3 LINE L1 5844 6181 -2 329 109 18 0 chr20 25336827 25336882 -46817000 + (GA)n Simple_repeat Simple_repeat 2 57 0 202 211 0 40 chr20 25337226 25337302 -46816580 + GA-rich Low_complexity Low_complexity 1 73 0 340 299 9 46 chr20 25337330 25337650 -46816232 + GA-rich Low_complexity Low_complexity 1 307 0 * 443 294 6 40 chr20 25337532 25337709 -46816173 + G-rich Low_complexity Low_complexity 1 171 0 21 57 0 0 chr20 25338501 25338536 -46815346 + GC_rich Low_complexity Low_complexity 1 35 0 204 263 0 0 chr20 25340832 25340889 -46812993 + (CGG)n Simple_repeat Simple_repeat 2 58 0 36 70 0 0 chr20 25340940 25341011 -46812871 + GC_rich Low_complexity Low_complexity 1 71 0 38 0 0 0 chr20 25341167 25341205 -46812677 + GC_rich Low_complexity Low_complexity 1 38 0 34 0 0 0 chr20 25341369 25341403 -46812479 + GC_rich Low_complexity Low_complexity 1 34 0 25 31 0 0 chr20 25342717 25342749 -46811133 + AT_rich Low_complexity Low_complexity 1 32 0 212 218 18 36 chr20 25345934 25345989 -46807893 + MIR SINE MIR 98 151 -111 1158 213 33 0 chr20 25349048 25349259 -46804623 + MER58A DNA MER1_type 2 219 -5 1985 133 6 22 chr20 25349452 25349769 -46804113 - AluSx SINE Alu 0 312 1 1847 163 7 3 chr20 25349794 25350101 -46803781 - AluJo SINE Alu -4 308 1 1851 128 0 51 chr20 25350371 25350684 -46803198 - AluSx SINE Alu 0 312 16 296 264 208 5 chr20 25351096 25351245 -46802637 + MER5A DNA MER1_type 4 189 0 266 333 20 0 chr20 25351496 25351595 -46802287 - MIR SINE MIR -44 218 118 258 156 0 0 chr20 25352208 25352253 -46801629 + T-rich Low_complexity Low_complexity 1 45 0 1285 82 0 0 chr20 25352255 25352425 -46801457 - AluSg/x SINE Alu -1 311 142 22 0 0 0 chr20 25352717 25352739 -46801143 + AT_rich Low_complexity Low_complexity 1 22 0 401 259 79 14 chr20 25352880 25353019 -46800863 + MIR SINE MIR 17 164 -98 552 270 0 22 chr20 25353025 25353162 -46800720 + LTR67 LTR ERVL 5 138 -419 426 289 42 26 chr20 25353385 25353575 -46800307 + LTR67 LTR ERVL 349 541 -16 2156 104 0 16 chr20 25353675 25353993 -46799889 - AluSq SINE Alu 0 313 1 610 214 131 52 chr20 25354041 25354485 -46799397 + MLT1G LTR MaLR 10 585 -5 1547 177 3 27 chr20 25354586 25354886 -46798996 - AluJb SINE Alu -19 293 1 190 259 165 89 chr20 25354886 25355044 -46798838 - MIR SINE MIR -58 204 35 1677 215 121 38 chr20 25355150 25355635 -46798247 - MLT1F LTR MaLR 0 590 1 392 300 65 40 chr20 25356109 25356130 -46797752 + L1MC4a LINE L1 5585 5604 -517 1719 183 28 79 chr20 25356130 25356524 -46797358 - MLT1A2 LTR MaLR 0 374 1 392 300 65 40 chr20 25356524 25356747 -46797135 + L1MC4a LINE L1 5604 5823 -298 1993 116 14 0 chr20 25356853 25357145 -46796737 - AluSx SINE Alu -16 296 1 2373 65 0 3 chr20 25359217 25359526 -46794356 + AluY SINE Alu 1 308 -3 185 300 38 50 chr20 25359560 25359640 -46794242 + MIR3 SINE MIR 78 156 -52 282 325 71 19 chr20 25360729 25360883 -46792999 + MER5A DNA MER1_type 28 189 0 1389 141 37 8 chr20 25366547 25366788 -46787094 + AluJb SINE Alu 45 292 -20 189 0 0 0 chr20 25367037 25367058 -46786824 + (A)n Simple_repeat Simple_repeat 1 21 0 351 265 12 0 chr20 25370907 25370990 -46782892 - L2 LINE L2 -25 3288 3205 604 211 53 20 chr20 25371057 25371209 -46782673 + MER106B DNA MER1_type 896 1052 -7 2177 90 13 7 chr20 25371210 25371510 -46782372 + AluSq SINE Alu 1 302 -11 28 29 0 0 chr20 25372684 25372719 -46781163 + AT_rich Low_complexity Low_complexity 1 35 0 2103 212 29 15 chr20 25372876 25373357 -46780525 + L1MB8 LINE L1 5689 6176 -2 535 277 201 51 chr20 25374895 25375450 -46778432 + L2 LINE L2 2659 3310 -3 657 183 43 86 chr20 25378268 25378454 -46775428 + MER5B DNA MER1_type 1 178 0 1581 178 0 4 chr20 25378777 25379053 -46774829 + AluJb SINE Alu 1 275 -37 312 231 83 50 chr20 25379224 25379345 -46774537 + MIR3 SINE MIR 74 198 -10 212 264 14 14 chr20 25380873 25380945 -46772937 + (TATATG)n Simple_repeat Simple_repeat 6 77 0 736 228 23 65 chr20 25385612 25385827 -46768055 - MER3 DNA MER1_type 0 209 4 237 149 21 43 chr20 25385980 25386027 -46767855 + MLT1F1 LTR MaLR 73 118 -449 817 129 0 0 chr20 25387772 25387888 -46765994 + FLAM_A SINE Alu 20 135 -7 196 175 75 0 chr20 25388176 25388216 -46765666 - MIR SINE MIR -114 148 106 * 267 307 64 36 chr20 25388181 25388321 -46765561 + MIR SINE MIR 70 213 -49 292 250 69 58 chr20 25388480 25388615 -46765267 - MIR SINE MIR -62 146 39 605 199 133 20 chr20 25389392 25389543 -46764339 - MLT1C LTR MaLR 0 467 300 535 257 78 37 chr20 25389580 25389798 -46764084 - MLT1C LTR MaLR -262 243 17 575 318 111 15 chr20 25390074 25390877 -46763005 + L1MB8 LINE L1 5031 5921 -257 1694 163 0 3 chr20 25390885 25391187 -46762695 - AluJo SINE Alu 0 301 1 333 299 82 69 chr20 25391983 25392214 -46761668 - L2 LINE L2 -2 3311 3078 4826 164 23 30 chr20 25393150 25393536 -46760346 + L1MB7 LINE L1 5188 5575 -609 2228 81 3 0 chr20 25393536 25393851 -46760031 + AluSp SINE Alu 1 316 0 4826 164 23 30 chr20 25393851 25394451 -46759431 + L1MB7 LINE L1 5575 6168 -16 1456 159 110 4 chr20 25394464 25394728 -46759154 + AluJo SINE Alu 1 292 -20 214 322 138 0 chr20 25394912 25394999 -46758883 - L2 LINE L2 -35 3237 3139 981 33 16 0 chr20 25396838 25396960 -46756922 + L1PA4 LINE L1 6032 6155 0 935 51 0 0 chr20 25396845 25396962 -46756920 + L1PA4 LINE L1 6039 6155 0 24 0 0 0 chr20 25397089 25397113 -46756769 + AT_rich Low_complexity Low_complexity 1 24 0 330 289 51 11 chr20 25399049 25399247 -46754635 - MIR SINE MIR -54 208 2 447 174 0 0 chr20 25400859 25400945 -46752937 + (CCCA)n Simple_repeat Simple_repeat 2 87 0 225 318 61 30 chr20 25401285 25401417 -46752465 - MIR SINE MIR -126 136 1 242 279 86 29 chr20 25402132 25402272 -46751610 + MIR3 SINE MIR 18 165 -43 287 248 163 8 chr20 25402346 25402475 -46751407 - LTR50 LTR ERVL -643 152 4 1208 130 47 0 chr20 25403779 25403971 -46749911 + L1MA7 LINE L1 6075 6275 -16 359 248 108 39 chr20 25405289 25405418 -46748464 - MIR SINE MIR -25 237 100 244 33 0 0 chr20 25405428 25405458 -46748424 - MER116 DNA Mariner -49 31 2 1693 184 3 3 chr20 25406801 25407089 -46746793 + AluJb SINE Alu 1 288 -24 297 197 167 0 chr20 25408149 25408215 -46745667 + MER116 DNA Mariner 1 77 -3 582 256 192 20 chr20 25409397 25410007 -46743875 + L2 LINE L2 2455 3224 -89 1652 187 140 16 chr20 25410177 25410621 -46743261 + Charlie4a DNA MER1_type 3 501 -7 183 339 0 0 chr20 25411203 25411268 -46742614 - MIR SINE MIR -58 150 86 2054 142 0 0 chr20 25411365 25411660 -46742222 - AluJb SINE Alu -17 295 1 446 280 190 9 chr20 25414224 25414435 -46739447 + MIR SINE MIR 1 249 -13 198 331 88 0 chr20 25415784 25415914 -46737968 + MIR SINE MIR 22 133 -75 199 209 60 45 chr20 25415981 25416048 -46737834 - L3 LINE CR1 -15 1562 1495 556 243 59 24 chr20 25416104 25416273 -46737609 + MER5B DNA MER1_type 1 175 -3 189 74 0 0 chr20 25416597 25416624 -46737258 + (CA)n Simple_repeat Simple_repeat 2 28 0 437 205 172 26 chr20 25416629 25416780 -46737102 - L1ME3A LINE L1 -50 6120 5948 466 222 52 34 chr20 25416782 25416917 -46736965 - L1ME3A LINE L1 -567 5595 5466 1860 177 96 10 chr20 25416917 25417388 -46736494 + MER44D DNA MER2_type 5 605 0 404 40 0 0 chr20 25418569 25418619 -46735263 + MADE1 DNA Mariner 31 80 0 194 323 0 32 chr20 25418694 25418756 -46735126 + MIR SINE MIR 148 207 -55 305 171 23 114 chr20 25419755 25419843 -46734039 - MER116 DNA Mariner 0 80 1 266 311 99 13 chr20 25422700 25422851 -46731031 + MIR SINE MIR 20 183 -79 976 309 94 23 chr20 25422893 25423369 -46730513 + Tigger8 DNA MER2_type 39 548 -118 22 35 0 0 chr20 25423941 25423970 -46729912 + AT_rich Low_complexity Low_complexity 1 29 0 390 225 67 33 chr20 25425069 25425189 -46728693 + MIR SINE MIR 14 137 -125 249 225 135 0 chr20 25425261 25425350 -46728532 + MIR SINE MIR 136 236 -26 281 315 65 9 chr20 25425877 25425985 -46727897 + L2 LINE L2 3159 3272 0 27 49 0 0 chr20 25426991 25427032 -46726850 + AT_rich Low_complexity Low_complexity 1 41 0 256 306 180 0 chr20 25428389 25428500 -46725382 - L2 LINE L2 -5 3267 3137 370 213 188 61 chr20 25428629 25428906 -46724976 + MLT1H1 LTR MaLR 65 376 -179 583 168 298 0 chr20 25428986 25429117 -46724765 - FAM SINE Alu -15 170 1 634 267 75 31 chr20 25429164 25429419 -46724463 + Charlie7 DNA MER1_type 61 326 -2286 849 222 0 30 chr20 25429461 25429659 -46724223 + Charlie7 DNA MER1_type 1490 1681 -931 618 270 79 4 chr20 25430296 25430537 -46723345 + Charlie7 DNA MER1_type 1761 2019 -593 509 77 83 12 chr20 25430560 25430728 -46723154 + (TA)n Simple_repeat Simple_repeat 1 180 0 707 174 0 22 chr20 25430840 25431024 -46722858 + (TA)n Simple_repeat Simple_repeat 1 180 0 22 0 0 0 chr20 25431033 25431055 -46722827 + AT_rich Low_complexity Low_complexity 1 22 0 1321 221 82 43 chr20 25431062 25431574 -46722308 + Charlie7 DNA MER1_type 2043 2574 -38 219 135 177 73 chr20 25432387 25432483 -46721399 - MIR SINE MIR -56 206 101 322 257 14 0 chr20 25437016 25437090 -46716792 - L2 LINE L2 -18 3295 3221 441 0 0 0 chr20 25437297 25437346 -46716536 + (CA)n Simple_repeat Simple_repeat 1 49 0 188 399 49 28 chr20 25437924 25438067 -46715815 - L3 LINE CR1 -51 1526 1381 446 256 113 95 chr20 25438267 25438541 -46715341 - Charlie8 DNA MER1_type -2138 279 1 208 310 14 0 chr20 25438544 25438615 -46715267 - L3 LINE CR1 -191 1386 1315 1218 331 132 28 chr20 25438666 25439698 -46714184 - L3 LINE CR1 -407 1170 32 288 0 0 0 chr20 25439710 25439742 -46714140 + (ATTG)n Simple_repeat Simple_repeat 1 32 0 408 20 0 0 chr20 25441089 25441138 -46712744 + (TG)n Simple_repeat Simple_repeat 2 50 0 275 236 14 0 chr20 25441248 25441320 -46712562 + L2 LINE L2 3193 3265 -7 1034 155 35 0 chr20 25442742 25442916 -46710966 - MER45 DNA AcHobo 0 1581 1402 198 0 0 0 chr20 25443562 25443584 -46710298 + (T)n Simple_repeat Simple_repeat 1 22 0 29 0 0 0 chr20 25444788 25444817 -46709065 + AT_rich Low_complexity Low_complexity 1 29 0 1008 162 52 0 chr20 25445640 25445813 -46708069 - AluJo SINE Alu -22 290 109 2156 272 143 16 chr20 25446029 25447171 -46706711 - L2 LINE L2 0 3313 2041 28 0 0 0 chr20 25447237 25447265 -46706617 + AT_rich Low_complexity Low_complexity 1 28 0 246 269 43 43 chr20 25447301 25447394 -46706488 - L2 LINE L2 -10 3303 3211 3000 240 73 57 chr20 25447394 25448822 -46705060 + L1ME3A LINE L1 3671 5144 -1002 423 0 0 0 chr20 25448822 25448869 -46705013 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 3000 240 73 57 chr20 25448869 25448939 -46704943 + L1ME3A LINE L1 5144 5211 -935 1051 308 22 7 chr20 25448940 25449356 -46704526 + L1ME3A LINE L1 5719 6140 -30 2180 277 87 49 chr20 25449383 25449534 -46704348 + L1M4 LINE L1 2584 2728 -3418 1239 185 86 40 chr20 25449534 25449738 -46704144 + MER58B DNA MER1_type 1 227 -2193 1949 145 0 7 chr20 25449738 25450035 -46703847 - AluSx SINE Alu -17 295 1 1239 185 86 40 chr20 25450035 25450155 -46703727 + MER58B DNA MER1_type 227 340 -1 2180 277 87 49 chr20 25450155 25450637 -46703245 + L1M4 LINE L1 2728 3190 -2956 2284 78 10 88 chr20 25450637 25451024 -46702858 + L1PA16 LINE L1 5808 6164 -2 2180 277 87 49 chr20 25451024 25452322 -46701560 + L1M4 LINE L1 3190 4590 -1556 194 305 110 12 chr20 25456102 25456184 -46697698 + L3 LINE CR1 1484 1573 -4 371 314 71 7 chr20 25456947 25457087 -46696795 - MIR SINE MIR -19 243 95 1412 106 35 22 chr20 25457095 25457321 -46696561 - MER30 DNA MER1_type -1 229 1 3737 217 104 75 chr20 25457372 25458005 -46695877 - L1MCb LINE L1 -3743 2830 2217 1939 166 3 3 chr20 25458005 25458306 -46695576 + AluJb SINE Alu 1 301 -11 3737 217 104 75 chr20 25458306 25459774 -46694108 - L1MCb LINE L1 -4356 2217 793 1994 152 0 10 chr20 25459774 25460077 -46693805 + AluJb SINE Alu 1 300 -12 3737 217 104 75 chr20 25460077 25460126 -46693756 - L1MCb LINE L1 -5780 793 747 1147 187 42 54 chr20 25460126 25460367 -46693515 + MER8 DNA MER2_type 2 239 0 3737 217 104 75 chr20 25460367 25460826 -46693056 - L1MCb LINE L1 -5826 747 5 359 313 152 43 chr20 25460826 25461056 -46692826 + L2 LINE L2 3058 3312 -1 26 30 0 0 chr20 25461606 25461639 -46692243 + AT_rich Low_complexity Low_complexity 1 33 0 360 111 0 0 chr20 25462999 25463062 -46690820 + (CA)n Simple_repeat Simple_repeat 2 64 0 339 352 32 0 chr20 25463229 25463354 -46690528 - MIR3 SINE MIR -65 143 15 485 211 0 28 chr20 25466225 25466334 -46687548 - MIR SINE MIR 0 262 157 450 301 62 48 chr20 25467996 25468205 -46685677 - MIR SINE MIR -5 257 46 39 38 0 0 chr20 25471503 25471556 -46682326 + AT_rich Low_complexity Low_complexity 1 53 0 14247 128 31 17 chr20 25471999 25474382 -46679500 - Tigger1 DNA MER2_type 0 2418 1 482 264 8 8 chr20 25474563 25474692 -46679190 - MIR SINE MIR -36 226 98 322 305 48 53 chr20 25475762 25475949 -46677933 - L1ME4a LINE L1 -1 6120 5935 248 311 19 28 chr20 25476046 25476152 -46677730 - L1ME4a LINE L1 -493 5628 5524 2065 107 0 14 chr20 25476613 25476902 -46676980 + AluSc SINE Alu 25 309 0 192 158 0 0 chr20 25476999 25477037 -46676845 + (TATG)n Simple_repeat Simple_repeat 4 41 0 410 333 68 13 chr20 25477779 25478016 -46675866 - MIR SINE MIR -11 251 2 205 284 0 45 chr20 25478428 25478495 -46675387 + L2 LINE L2 3197 3260 -12 28 0 0 0 chr20 25478820 25478848 -46675034 + AT_rich Low_complexity Low_complexity 1 28 0 360 55 0 0 chr20 25479258 25479313 -46674569 - L1MB4 LINE L1 0 6180 6126 1760 140 10 47 chr20 25479503 25479803 -46674079 - AluSx SINE Alu -23 289 1 227 29 57 0 chr20 25481838 25481873 -46672009 + (GAAAA)n Simple_repeat Simple_repeat 4 40 0 213 312 147 52 chr20 25483757 25483988 -46669894 + L2 LINE L2 2952 3204 -68 2099 108 7 3 chr20 25484056 25484352 -46669530 + AluSg SINE Alu 1 297 -13 384 22 0 0 chr20 25484372 25484417 -46669465 + (CA)n Simple_repeat Simple_repeat 2 46 0 5189 153 7 191 chr20 25485522 25487452 -46666430 + L1PA15-16 LINE L1 8 1583 -5266 * 5541 233 42 25 chr20 25487447 25489058 -46664824 + L1PBa LINE L1 2 1639 -5224 * 5759 151 28 14 chr20 25489029 25490209 -46663673 + L1PBb LINE L1 7 1198 -5006 2154 113 0 3 chr20 25490209 25490502 -46663380 - AluSc SINE Alu -17 292 1 204 263 126 42 chr20 25491311 25491406 -46662476 + MIR SINE MIR 47 149 -113 342 320 75 32 chr20 25491676 25491954 -46661928 + L2 LINE L2 1861 2150 -1164 665 207 6 65 chr20 25492024 25492193 -46661689 - FRAM SINE Alu -17 159 1 1227 158 49 20 chr20 25492203 25492450 -46661432 - L1MD2 LINE L1 -16 6343 6090 190 303 97 55 chr20 25492675 25492820 -46661062 + L2 LINE L2 3043 3193 -79 1896 249 57 22 chr20 25494277 25494875 -46659007 + L1ME3A LINE L1 5547 6165 -5 979 193 53 0 chr20 25495628 25495872 -46658010 + L1MA4 LINE L1 6042 6298 -2 2262 78 0 0 chr20 25496122 25496403 -46657479 - AluY SINE Alu -30 281 1 216 158 0 0 chr20 25496800 25496838 -46657044 + (TAAA)n Simple_repeat Simple_repeat 1 38 0 309 177 101 13 chr20 25497424 25497503 -46656379 - MER94 DNA DNA -46 88 3 221 259 103 17 chr20 25498898 25498956 -46654926 - MIR SINE MIR -77 185 123 465 291 22 28 chr20 25499563 25499745 -46654137 + L2 LINE L2 2881 3061 -252 184 354 47 0 chr20 25500240 25500367 -46653515 - L2 LINE L2 -349 2965 2833 1413 189 58 49 chr20 25501631 25501975 -46651907 + MER7A DNA MER2_type 1 345 -1 214 346 9 19 chr20 25502303 25502410 -46651472 + MIR SINE MIR 83 188 -74 219 351 176 0 chr20 25502877 25503042 -46650840 + MIR SINE MIR 50 243 -19 433 321 52 9 chr20 25503190 25503396 -46650486 + MIR SINE MIR 45 262 0 22 35 0 0 chr20 25504379 25504408 -46649474 + AT_rich Low_complexity Low_complexity 1 29 0 882 303 103 30 chr20 25504557 25505023 -46648859 - L2 LINE L2 -785 2529 2030 180 111 0 0 chr20 25505185 25505212 -46648670 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 479 290 125 19 chr20 25505323 25505971 -46647911 + L1M4 LINE L1 2115 2831 -3315 557 304 90 40 chr20 25506084 25506310 -46647572 + L1M4 LINE L1 3109 3322 -2824 2470 68 0 3 chr20 25506310 25506605 -46647277 + AluY SINE Alu 1 294 -17 557 304 90 40 chr20 25506605 25507081 -46646801 + L1M4 LINE L1 3322 3846 -2300 317 238 0 0 chr20 25507491 25507554 -46646328 - MER20 DNA MER1_type -155 64 2 280 247 43 31 chr20 25507555 25507717 -46646165 - L1MC4a LINE L1 -1779 6029 5866 2300 112 0 0 chr20 25509485 25509788 -46644094 + AluSx SINE Alu 1 303 -9 794 288 30 0 chr20 25509919 25510152 -46643730 - MIR SINE MIR 0 262 23 351 188 125 0 chr20 25510686 25510766 -46643116 + MER103 DNA DNA 77 166 0 770 251 136 9 chr20 25510989 25511320 -46642562 - L1ME3A LINE L1 -125 6045 5673 4313 125 39 12 chr20 25511620 25512381 -46641501 - L1MA9 LINE L1 0 6312 5531 357 100 62 25 chr20 25512896 25512976 -46640906 - L1MA9 LINE L1 0 6312 6230 21 0 0 0 chr20 25513203 25513224 -46640658 + AT_rich Low_complexity Low_complexity 1 21 0 799 146 64 23 chr20 25513225 25513372 -46640510 - L1MA9 LINE L1 -756 5535 5379 2798 174 45 8 chr20 25513372 25513901 -46639981 - MER44D DNA MER2_type -1 604 1 799 146 64 23 chr20 25513901 25513924 -46639958 - L1MA9 LINE L1 -912 5379 5358 4321 72 12 38 chr20 25514040 25515199 -46638683 + L1PA5 LINE L1 4114 5302 -852 2008 134 0 10 chr20 25515199 25515491 -46638391 - AluSc SINE Alu -19 290 2 4321 72 12 38 chr20 25515491 25515523 -46638359 + L1PA5 LINE L1 5302 5333 -821 4321 40 0 0 chr20 25515523 25516040 -46637842 + L1PA5 LINE L1 5637 6154 0 4321 72 12 38 chr20 25516040 25516287 -46637595 + L1PA5 LINE L1 5333 6154 0 1343 96 0 6 chr20 25516287 25516464 -46637418 + AluY SINE Alu 1 176 -135 5343 59 3 6 chr20 25516497 25517175 -46636707 + L1PA7 LINE L1 5476 6151 -3 684 188 14 51 chr20 25517360 25517513 -46636369 - FLAM_A SINE Alu 0 148 1 1668 187 3 34 chr20 25517931 25518252 -46635630 + AluJo SINE Alu 1 311 -1 1358 177 107 10 chr20 25519893 25520192 -46633690 - MER7A DNA MER2_type 0 346 21 234 0 0 0 chr20 25520273 25520299 -46633583 + (CA)n Simple_repeat Simple_repeat 1 26 0 2061 99 10 0 chr20 25522140 25522434 -46631448 - L1PB1 LINE L1 0 6151 5855 413 292 43 32 chr20 25522452 25522733 -46631149 + MER113 DNA MER1_type? 174 457 -64 220 284 203 47 chr20 25522770 25522918 -46630964 + MIR SINE MIR 14 144 -64 306 0 0 0 chr20 25525091 25525125 -46628757 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1644 210 0 0 chr20 25525417 25525725 -46628157 + AluJo SINE Alu 1 308 0 1794 181 28 52 chr20 25526132 25526596 -46627286 - L1MB7 LINE L1 -9 6175 5723 686 156 50 25 chr20 25526600 25526760 -46627122 - L1MB7 LINE L1 -746 5434 5271 850 191 0 0 chr20 25526810 25526951 -46626931 - AluSq/x SINE Alu -172 141 1 4671 203 41 13 chr20 25526952 25528144 -46625738 - L1MB7 LINE L1 -861 5285 4060 2388 76 3 0 chr20 25529175 25529466 -46624416 + AluSx SINE Alu 1 292 -20 195 319 83 0 chr20 25529910 25529982 -46623900 - MIR3 SINE MIR -6 202 125 2352 93 0 13 chr20 25530143 25530453 -46623429 - AluSq SINE Alu -7 306 1 290 212 30 0 chr20 25531908 25531992 -46621890 + MIR SINE MIR 69 153 -63 24 0 0 0 chr20 25532067 25532091 -46621791 + AT_rich Low_complexity Low_complexity 1 24 0 928 173 104 20 chr20 25533957 25534159 -46619723 - MER20 DNA MER1_type 0 219 1 216 111 0 0 chr20 25535961 25535997 -46617885 + (CA)n Simple_repeat Simple_repeat 1 36 0 218 250 14 28 chr20 25535999 25536071 -46617811 + (CATATA)n Simple_repeat Simple_repeat 4 74 0 279 302 188 7 chr20 25536761 25536910 -46616972 - MIR3 SINE MIR -1 207 32 25 31 0 0 chr20 25537891 25537923 -46615959 + AT_rich Low_complexity Low_complexity 1 32 0 247 279 57 29 chr20 25538015 25538155 -46615727 - LTR67 LTR ERVL -6 551 408 693 270 82 10 chr20 25538774 25538970 -46614912 - MIR SINE MIR -48 214 5 200 266 93 98 chr20 25539752 25539860 -46614022 + MIR SINE MIR 37 144 -118 732 200 114 0 chr20 25539860 25540000 -46613882 + FRAM SINE Alu 2 157 -9 576 0 0 0 chr20 25540005 25540069 -46613813 + (TAAAA)n Simple_repeat Simple_repeat 4 67 0 200 266 93 98 chr20 25540069 25540168 -46613714 + MIR SINE MIR 148 249 -13 23 54 0 0 chr20 25541003 25541040 -46612842 + AT_rich Low_complexity Low_complexity 1 37 0 191 273 81 126 chr20 25542747 25542945 -46610937 + L2 LINE L2 2554 2742 -572 191 348 45 0 chr20 25543396 25543485 -46610397 - L2 LINE L2 -554 2760 2668 944 82 0 37 chr20 25544476 25544610 -46609272 + AluSg/x SINE Alu 168 296 -14 330 244 114 16 chr20 25544639 25544762 -46609120 + L1ME4a LINE L1 5975 6109 -12 2743 219 47 38 chr20 25545593 25546360 -46607522 - L1ME1 LINE L1 -5 6161 5388 279 323 62 8 chr20 25546363 25546493 -46607389 - L2 LINE L2 -282 3031 2895 851 304 163 18 chr20 25547018 25547455 -46606427 + L2 LINE L2 1815 2314 -1000 1260 279 104 14 chr20 25547601 25548110 -46605772 - HAL1 LINE L1 -1943 564 10 1505 192 70 5 chr20 25548240 25548625 -46605257 - L1MC3 LINE L1 -1 7784 7375 303 303 17 11 chr20 25548636 25548811 -46605071 - L1M4 LINE L1 -2324 3822 3647 22 0 0 0 chr20 25548944 25548966 -46604916 + AT_rich Low_complexity Low_complexity 1 22 0 267 224 104 22 chr20 25548999 25549182 -46604700 - L1M4 LINE L1 -2885 3261 3064 23 0 0 0 chr20 25550498 25550521 -46603361 + AT_rich Low_complexity Low_complexity 1 23 0 22 35 0 0 chr20 25551347 25551376 -46602506 + AT_rich Low_complexity Low_complexity 1 29 0 220 361 41 16 chr20 25551435 25551557 -46602325 - L2 LINE L2 -14 3258 3134 417 305 15 15 chr20 25551816 25552085 -46601797 - L1ME1 LINE L1 -1097 5049 4781 1677 220 53 13 chr20 25552360 25552882 -46601000 + MER74A LTR ERVL 1 622 0 229 302 63 10 chr20 25553594 25553733 -46600149 + MIR3 SINE MIR 5 152 -67 188 143 143 20 chr20 25554260 25554309 -46599573 - MIR SINE MIR -71 137 83 399 21 0 0 chr20 25554309 25554357 -46599525 + (TG)n Simple_repeat Simple_repeat 2 49 0 522 304 31 16 chr20 25554380 25554574 -46599308 - MIR SINE MIR -37 225 29 1366 199 0 15 chr20 25556694 25556961 -46596921 + AluJb SINE Alu 50 312 0 467 275 84 68 chr20 25558510 25559070 -46594812 + L1ME3 LINE L1 1013 1581 -4949 324 283 56 61 chr20 25559132 25559312 -46594570 + L1ME3 LINE L1 1547 1725 -4815 1033 289 76 14 chr20 25559559 25560509 -46593373 + L1ME3 LINE L1 5275 6280 -276 21 0 0 0 chr20 25560978 25560999 -46592883 + AT_rich Low_complexity Low_complexity 1 21 0 236 287 46 23 chr20 25561901 25562117 -46591765 + L1MEd LINE L1 3648 3868 -2672 1202 147 56 8 chr20 25562135 25562386 -46591496 - L1MA8 LINE L1 -3 6288 6026 232 292 34 0 chr20 25563004 25563093 -46590789 + L2 LINE L2 2827 2918 -354 240 35 0 0 chr20 25563832 25563861 -46590021 + (CA)n Simple_repeat Simple_repeat 1 29 0 181 299 88 100 chr20 25564244 25564585 -46589297 + L2 LINE L2 2594 2930 -384 1281 202 62 0 chr20 25565093 25565350 -46588532 - AluJb SINE Alu -39 273 1 2186 109 31 0 chr20 25566872 25567166 -46586716 - AluY SINE Alu -8 303 1 1907 130 18 25 chr20 25567819 25568138 -46585744 + AluSg SINE Alu 1 317 0 929 186 129 0 chr20 25568924 25569117 -46584765 - MER20 DNA MER1_type -1 218 1 2008 120 0 0 chr20 25569742 25570016 -46583866 + AluSg SINE Alu 37 310 0 2070 139 0 0 chr20 25571858 25572146 -46581736 + AluSx SINE Alu 21 308 -4 1977 148 0 3 chr20 25572160 25572465 -46581417 + AluSx SINE Alu 1 304 -8 2433 97 0 0 chr20 25572967 25573276 -46580606 + AluSg SINE Alu 1 309 -1 290 25 0 25 chr20 25574961 25575001 -46578881 + (TG)n Simple_repeat Simple_repeat 1 39 0 641 233 116 53 chr20 25575700 25576001 -46577881 + MLT1H LTR MaLR 229 548 -1 469 234 5 151 chr20 25576642 25576720 -46577162 + MIR SINE MIR 48 89 -173 1473 117 26 30 chr20 25576720 25576951 -46576931 - MER30 DNA MER1_type 0 230 1 469 234 5 151 chr20 25576951 25577054 -46576828 + MIR SINE MIR 89 205 -57 251 298 111 47 chr20 25577860 25578376 -46575506 + L2 LINE L2 1277 1825 -1489 309 329 93 0 chr20 25578616 25578777 -46575105 + L2 LINE L2 2880 3055 -217 32 26 0 0 chr20 25579609 25579648 -46574234 + AT_rich Low_complexity Low_complexity 1 39 0 22 56 0 0 chr20 25579731 25579767 -46574115 + AT_rich Low_complexity Low_complexity 1 36 0 324 260 73 8 chr20 25580170 25580293 -46573589 + MIR3 SINE MIR 73 203 -5 426 330 17 22 chr20 25580950 25581129 -46572753 - MIR SINE MIR -74 188 11 1757 178 3 16 chr20 25581142 25581446 -46572436 - AluJo SINE Alu -12 300 1 235 244 58 47 chr20 25583076 25583162 -46570720 + L2 LINE L2 2174 2260 -1054 30 0 0 0 chr20 25583355 25583385 -46570497 + AT_rich Low_complexity Low_complexity 1 30 0 184 365 58 19 chr20 25584323 25584427 -46569455 - L3b LINE CR1 -205 1378 1271 582 270 179 50 chr20 25585552 25586215 -46567667 + L2 LINE L2 2548 3312 -1 233 238 32 16 chr20 25586215 25586278 -46567604 + GA-rich Low_complexity Low_complexity 4 67 0 2264 94 17 7 chr20 25587310 25587609 -46566273 - AluSx SINE Alu -10 302 1 21 36 0 0 chr20 25587987 25588015 -46565867 + AT_rich Low_complexity Low_complexity 1 28 0 1045 180 50 0 chr20 25590105 25590305 -46563577 - MER6B DNA MER2_type 0 210 1 194 239 106 80 chr20 25590820 25590933 -46562949 - MIR3 SINE MIR -25 183 85 29 0 0 0 chr20 25591623 25591652 -46562230 + AT_rich Low_complexity Low_complexity 1 29 0 209 307 0 80 chr20 25591731 25591819 -46562063 + L2 LINE L2 3192 3272 0 2401 100 0 0 chr20 25593008 25593318 -46560564 + AluSg SINE Alu 1 310 0 489 252 8 0 chr20 25593491 25593610 -46560272 - MER63 DNA MER1_type -273 789 44 273 304 0 0 chr20 25593610 25593689 -46560193 + T-rich Low_complexity Low_complexity 1 79 0 225 253 111 61 chr20 25593983 25594082 -46559800 - MIR SINE MIR -121 141 38 581 297 102 24 chr20 25594245 25594864 -46559018 + L1MEc LINE L1 1075 1741 -4655 598 269 67 41 chr20 25595255 25595719 -46558163 + L1MEc LINE L1 2182 2657 -3558 501 219 57 57 chr20 25595743 25595953 -46557929 - L1MEd LINE L1 -5006 1113 904 1100 265 95 27 chr20 25596114 25596193 -46557689 + HAL1b LINE L1 467 539 -809 2289 117 0 3 chr20 25596193 25596501 -46557381 + AluSx SINE Alu 2 308 -4 1100 265 95 27 chr20 25596501 25597009 -46556873 + HAL1b LINE L1 539 1094 -254 305 333 5 53 chr20 25597191 25597380 -46556502 + (CCTG)n Simple_repeat Simple_repeat 1 180 0 610 254 26 71 chr20 25597651 25597919 -46555963 + MER112 DNA MER1_type 1 256 -4 815 226 16 5 chr20 25598905 25599095 -46554787 + MER58A DNA MER1_type 33 224 0 1046 188 14 40 chr20 25600680 25600903 -46552979 - MER20 DNA MER1_type -2 217 1 342 0 0 0 chr20 25601468 25601506 -46552376 + (CA)n Simple_repeat Simple_repeat 2 39 0 801 286 83 20 chr20 25603093 25603443 -46550439 + MLT1H1 LTR MaLR 3 374 -181 2159 184 105 4 chr20 25603448 25603905 -46549977 + MLT1D LTR MaLR 3 505 0 2367 53 0 20 chr20 25604175 25604477 -46549405 - AluY SINE Alu -15 296 1 342 290 125 40 chr20 25604819 25605019 -46548863 - L1MC/D LINE L1 -2337 5471 5255 2300 115 0 3 chr20 25605159 25605582 -46548300 - AluSx SINE Alu 0 422 1 2009 91 34 0 chr20 25605660 25605925 -46547957 - AluY SINE Alu -37 274 1 375 23 0 0 chr20 25608687 25608731 -46545151 + (TG)n Simple_repeat Simple_repeat 2 45 0 240 323 0 0 chr20 25610710 25610772 -46543110 - MIR SINE MIR -108 100 39 913 291 29 0 chr20 25613182 25613426 -46540456 + MIR SINE MIR 2 252 -10 22 0 0 0 chr20 25614014 25614036 -46539846 + AT_rich Low_complexity Low_complexity 1 22 0 651 60 0 0 chr20 25614251 25614335 -46539547 + (GGGGA)n Simple_repeat Simple_repeat 4 87 0 2228 97 0 45 chr20 25614348 25614658 -46539224 - AluSx SINE Alu -16 296 1 241 261 152 48 chr20 25615288 25615453 -46538429 - MIR3 SINE MIR -5 203 22 2414 94 3 0 chr20 25617254 25617561 -46536321 - AluSx SINE Alu -4 308 1 275 54 0 0 chr20 25617722 25617759 -46536123 + MLT1E2 LTR MaLR 590 626 0 939 251 39 4 chr20 25617816 25618047 -46535835 + MIR SINE MIR 2 240 -22 29 0 0 0 chr20 25618091 25618120 -46535762 + AT_rich Low_complexity Low_complexity 1 29 0 1662 123 112 8 chr20 25618203 25618471 -46535411 - AluSc SINE Alu -13 296 1 486 179 135 43 chr20 25618804 25619011 -46534871 - MER96B DNA MER1_type? 0 417 192 21 71 0 0 chr20 25619123 25619165 -46534717 + AT_rich Low_complexity Low_complexity 1 42 0 284 306 67 0 chr20 25619476 25619610 -46534272 + L1MCc LINE L1 993 1135 -5288 1070 183 68 0 chr20 25619614 25619866 -46534016 + L1ME1 LINE L1 4978 5246 -900 2731 208 89 33 chr20 25619876 25620663 -46533219 + L1ME1 LINE L1 5318 6148 -18 25 31 0 0 chr20 25620677 25620709 -46533173 + AT_rich Low_complexity Low_complexity 1 32 0 278 228 55 170 chr20 25623024 25623406 -46530476 + MER46C DNA MER2_type 1 338 0 26 30 0 0 chr20 25624073 25624106 -46529776 + AT_rich Low_complexity Low_complexity 1 33 0 287 292 150 8 chr20 25624404 25624524 -46529358 + L2 LINE L2 2934 3070 -202 2489 76 3 16 chr20 25625057 25625373 -46528509 + AluSx SINE Alu 1 312 0 498 230 10 0 chr20 25625385 25625485 -46528397 - MER5A DNA MER1_type -86 103 3 22 0 0 0 chr20 25626031 25626053 -46527829 + AT_rich Low_complexity Low_complexity 1 22 0 3644 128 9 24 chr20 25626289 25626342 -46527540 - L1MA7 LINE L1 -334 5957 5905 2165 119 0 3 chr20 25626342 25626637 -46527245 - AluSx SINE Alu -18 294 1 3644 128 9 24 chr20 25626637 25627218 -46526664 - L1MA7 LINE L1 -386 5905 5332 28 0 0 0 chr20 25627369 25627397 -46526485 + AT_rich Low_complexity Low_complexity 1 28 0 30 0 0 0 chr20 25627463 25627493 -46526389 + AT_rich Low_complexity Low_complexity 1 30 0 295 322 124 33 chr20 25627531 25627773 -46526109 - L2 LINE L2 -190 3082 2819 23 0 0 0 chr20 25631807 25631830 -46522052 + AT_rich Low_complexity Low_complexity 1 23 0 1853 131 71 14 chr20 25632109 25632392 -46521490 + AluSx SINE Alu 1 299 -13 26 0 0 0 chr20 25633192 25633218 -46520664 + AT_rich Low_complexity Low_complexity 1 26 0 2155 134 0 3 chr20 25633301 25633607 -46520275 - AluSx SINE Alu -7 305 1 390 309 207 17 chr20 25634798 25635228 -46518654 - L2 LINE L2 -1 3271 2752 571 163 0 0 chr20 25635448 25635540 -46518342 - Tigger7 DNA MER2_type 0 2491 2400 * 3032 139 13 50 chr20 25635539 25635752 -46518130 - Tigger7 DNA MER2_type -212 521 302 2088 132 0 0 chr20 25635752 25636039 -46517843 - AluSx SINE Alu -25 287 1 3032 139 13 50 chr20 25636039 25636366 -46517516 - Tigger7 DNA MER2_type -431 302 1 22 0 0 0 chr20 25637229 25637251 -46516631 + AT_rich Low_complexity Low_complexity 1 22 0 181 160 20 20 chr20 25639041 25639091 -46514791 + GA-rich Low_complexity Low_complexity 2 51 0 232 35 0 0 chr20 25640296 25640325 -46513557 + Charlie5 DNA MER1_type 6 34 -2578 1710 120 0 0 chr20 25640325 25640577 -46513305 + AluSx SINE Alu 58 309 0 1583 197 76 63 chr20 25641455 25641982 -46511900 + MER74A LTR ERVL 1 534 -24 424 254 42 34 chr20 25642257 25642375 -46511507 + L2 LINE L2 3195 3313 0 476 318 65 30 chr20 25642455 25642656 -46511226 + MIR SINE MIR 8 215 -47 2280 105 0 7 chr20 25642813 25643118 -46510764 + AluSx SINE Alu 1 303 -9 518 275 71 62 chr20 25644417 25644980 -46508902 + L1MC/D LINE L1 690 1257 -4862 2336 97 0 7 chr20 25645049 25645359 -46508523 + AluY SINE Alu 1 308 -3 24 32 0 0 chr20 25645359 25645390 -46508492 + AT_rich Low_complexity Low_complexity 1 31 0 228 163 0 0 chr20 25645494 25645537 -46508345 + (CTA)n Simple_repeat Simple_repeat 1 43 0 579 273 46 85 chr20 25645683 25646049 -46507833 + L1MC/D LINE L1 3383 3734 -2395 1649 159 28 28 chr20 25646053 25646375 -46507507 + AluJo SINE Alu 1 322 0 340 233 95 50 chr20 25646380 25646663 -46507219 + L1MC/D LINE L1 3817 4112 -2017 356 338 14 0 chr20 25646798 25646940 -46506942 + L1ME3A LINE L1 5807 5950 -220 21 36 0 0 chr20 25647921 25647949 -46505933 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr20 25648026 25648049 -46505833 + AT_rich Low_complexity Low_complexity 1 23 0 255 286 43 50 chr20 25648078 25648239 -46505643 + L1MC/D LINE L1 5544 5703 -2088 183 254 0 36 chr20 25648604 25648659 -46505223 + MIR SINE MIR 36 88 -174 181 261 109 0 chr20 25648922 25648968 -46504914 - MIR SINE MIR -29 233 183 799 188 71 0 chr20 25648970 25649140 -46504742 - MER58A DNA MER1_type -1 223 42 189 0 0 0 chr20 25649195 25649216 -46504666 + (TTCA)n Simple_repeat Simple_repeat 3 23 0 1038 254 99 66 chr20 25649217 25649779 -46504103 - L2 LINE L2 -12 3301 2648 2600 57 0 10 chr20 25649779 25650093 -46503789 - AluY SINE Alu 0 311 1 1038 254 99 66 chr20 25650093 25650337 -46503545 - L2 LINE L2 -665 2648 2414 328 339 135 14 chr20 25651250 25651598 -46502284 + L2 LINE L2 2258 2647 -667 220 222 133 0 chr20 25652210 25652300 -46501582 - MIR SINE MIR -126 136 35 813 181 13 27 chr20 25653856 25654005 -46499877 + FRAM SINE Alu 1 146 -30 203 59 0 29 chr20 25654008 25654042 -46499840 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 192 194 0 0 chr20 25654812 25654848 -46499034 - L2 LINE L2 -86 3186 3151 837 315 92 21 chr20 25655019 25655744 -46498138 + L2 LINE L2 2208 2997 -316 1938 174 103 72 chr20 25655748 25656260 -46497622 + LTR64 LTR ERVK 1 528 -30 535 293 20 0 chr20 25656878 25657028 -46496854 + L2 LINE L2 3159 3311 -2 198 254 118 55 chr20 25657585 25657695 -46496187 - MIR SINE MIR -66 196 80 474 216 119 67 chr20 25658293 25658411 -46495471 + MIR SINE MIR 16 149 -113 2117 108 49 0 chr20 25658411 25658697 -46495185 + AluSx SINE Alu 1 300 -12 474 216 119 67 chr20 25658697 25658772 -46495110 + MIR SINE MIR 149 219 -43 841 97 0 0 chr20 25660360 25660473 -46493409 + AluSp/q SINE Alu 190 302 -11 2374 88 0 0 chr20 25661512 25661809 -46492073 + AluSc SINE Alu 4 300 -9 1466 309 94 28 chr20 25662572 25663543 -46490339 + L2 LINE L2 92 1126 -2188 230 204 216 0 chr20 25663718 25663806 -46490076 + L2 LINE L2 1837 1943 -1371 2104 164 105 0 chr20 25663947 25664337 -46489545 + MSTB1 LTR MaLR 1 431 -1 26 64 0 0 chr20 25664422 25664469 -46489413 + AT_rich Low_complexity Low_complexity 1 47 0 556 272 151 47 chr20 25664665 25665093 -46488789 + MLT1L LTR MaLR 104 492 -19 2084 130 3 13 chr20 25665970 25666277 -46487605 + AluJb SINE Alu 1 304 -8 530 290 95 37 chr20 25668571 25669048 -46484834 + L2 LINE L2 2665 3170 -143 845 148 0 15 chr20 25669048 25669183 -46484699 - FLAM_C SINE Alu 0 133 1 530 290 95 37 chr20 25669183 25669246 -46484636 + L2 LINE L2 3170 3228 -85 658 116 0 74 chr20 25669390 25669511 -46484371 + AluJb SINE Alu 196 307 -5 372 253 22 51 chr20 25669726 25669973 -46483909 + MLT1K LTR MaLR 134 422 -166 361 178 196 28 chr20 25670052 25670159 -46483723 + MLT1K LTR MaLR 456 580 -8 751 204 38 0 chr20 25670263 25670420 -46483462 + L1MB5 LINE L1 5971 6133 -41 763 81 0 0 chr20 25670421 25670520 -46483362 - AluSg/x SINE Alu -15 297 199 2099 110 16 44 chr20 25670528 25670847 -46483035 - AluSx SINE Alu -2 310 1 261 104 0 0 chr20 25670847 25670895 -46482987 + L1MB5 LINE L1 6127 6174 0 348 306 16 16 chr20 25670933 25671057 -46482825 - L1ME LINE L1 -468 5653 5530 5763 99 18 11 chr20 25671765 25672621 -46481261 + L1PA16 LINE L1 5303 6164 -2 207 343 0 0 chr20 25673192 25673262 -46480620 + L2 LINE L2 3243 3312 -1 802 231 93 5 chr20 25673263 25673479 -46480403 + MIR SINE MIR 28 262 0 2041 107 31 7 chr20 25673603 25673894 -46479988 + AluSg SINE Alu 1 298 -12 2402 101 0 0 chr20 25673906 25674214 -46479668 + AluSg SINE Alu 1 308 -2 1825 239 43 5 chr20 25674418 25674861 -46479021 - LTR16B LTR ERVL -4 460 1 1890 158 0 0 chr20 25675039 25675330 -46478552 + AluSx SINE Alu 3 293 -19 24 32 0 0 chr20 25675683 25675714 -46478168 + AT_rich Low_complexity Low_complexity 1 31 0 183 127 16 159 chr20 25676906 25676969 -46476913 + L2 LINE L2 2725 2778 -536 186 306 25 50 chr20 25677004 25677164 -46476718 + L2 LINE L2 2933 3088 -184 1596 192 20 7 chr20 25677357 25677649 -46476233 - AluJb SINE Alu -16 296 1 21 0 0 0 chr20 25677740 25677761 -46476121 + AT_rich Low_complexity Low_complexity 1 21 0 280 0 0 48 chr20 25677794 25677836 -46476046 + (TTTTG)n Simple_repeat Simple_repeat 2 41 0 2128 98 0 0 chr20 25677839 25678113 -46475769 - AluSg SINE Alu -36 274 1 210 283 195 0 chr20 25678963 25679076 -46474806 + MIR SINE MIR 57 191 -71 225 200 240 0 chr20 25679438 25679538 -46474344 + L1ME2 LINE L1 5604 5727 -394 206 143 0 48 chr20 25679539 25679581 -46474301 + (GGAA)n Simple_repeat Simple_repeat 1 40 0 1499 187 19 7 chr20 25680112 25680435 -46473447 + MER33 DNA MER1_type 1 319 -5 2425 114 37 0 chr20 25680478 25680829 -46473053 + THE1B LTR MaLR 1 364 0 1511 185 10 34 chr20 25681046 25681183 -46472699 + AluJb SINE Alu 1 140 -172 2236 119 0 0 chr20 25681183 25681485 -46472397 + AluSx SINE Alu 1 302 -10 1511 185 10 34 chr20 25681485 25681644 -46472238 + AluJb SINE Alu 140 290 -22 204 245 0 0 chr20 25681803 25681852 -46472030 + MIR SINE MIR 106 154 -108 372 268 33 33 chr20 25682130 25682283 -46471599 - MIR SINE MIR -65 197 45 23 0 0 0 chr20 25683936 25683959 -46469923 + AT_rich Low_complexity Low_complexity 1 23 0 27 29 0 0 chr20 25684483 25684517 -46469365 + GC_rich Low_complexity Low_complexity 1 34 0 22 0 0 0 chr20 25684640 25684662 -46469220 + GC_rich Low_complexity Low_complexity 1 22 0 279 122 0 0 chr20 25684728 25684777 -46469105 + (CCG)n Simple_repeat Simple_repeat 2 50 0 347 285 73 8 chr20 25685885 25686008 -46467874 + L2 LINE L2 3137 3267 -5 453 150 0 0 chr20 25686139 25686219 -46467663 + L1ME2 LINE L1 5783 5862 -302 351 314 41 0 chr20 25686535 25686656 -46467226 - L2 LINE L2 -10 3262 3137 424 183 124 183 chr20 25687085 25687307 -46466575 + L1MC4a LINE L1 5415 5648 -2160 1603 122 83 8 chr20 25687307 25687561 -46466321 - AluSx SINE Alu 0 312 40 2168 126 13 0 chr20 25687563 25687864 -46466018 - AluSx SINE Alu -7 305 1 424 183 124 183 chr20 25687864 25687911 -46465971 + L1MC4a LINE L1 5649 5671 -2137 429 202 89 65 chr20 25687957 25688125 -46465757 + L1MC4a LINE L1 6066 6237 -1571 1191 256 94 32 chr20 25688213 25688651 -46465231 + MLT1C LTR MaLR 1 465 -2 324 225 73 80 chr20 25688708 25688859 -46465023 + L1MC4a LINE L1 5748 5897 -1911 791 217 165 32 chr20 25688869 25689214 -46464668 + L1MC4a LINE L1 5967 6357 -1451 1957 120 62 7 chr20 25689367 25689659 -46464223 + AluSc SINE Alu 1 308 -1 987 205 86 52 chr20 25689713 25689728 -46464154 - L1M4 LINE L1 -1196 4950 4937 2174 121 13 0 chr20 25689728 25690035 -46463847 + AluSx SINE Alu 2 312 0 987 205 86 52 chr20 25690035 25690075 -46463807 - L1M4 LINE L1 -1209 4937 4900 2454 61 7 0 chr20 25690075 25690370 -46463512 - AluY SINE Alu -14 297 1 987 205 86 52 chr20 25690370 25690640 -46463242 - L1M4 LINE L1 -1246 4900 4613 279 194 236 0 chr20 25690681 25690753 -46463129 + L1MC4a LINE L1 6645 6733 -1075 26 30 0 0 chr20 25690756 25690789 -46463093 + AT_rich Low_complexity Low_complexity 1 33 0 742 168 0 0 chr20 25690789 25690902 -46462980 - FLAM_C SINE Alu -24 119 7 457 213 259 11 chr20 25690912 25691086 -46462796 + L1MC4 LINE L1 6812 7028 -1014 703 200 23 0 chr20 25691099 25691229 -46462653 + AluJo SINE Alu 3 135 -177 2337 82 0 30 chr20 25691288 25691592 -46462290 - AluY SINE Alu -16 295 1 1229 139 191 45 chr20 25691749 25692038 -46461844 + AluJo SINE Alu 1 312 0 1727 185 3 3 chr20 25692984 25693282 -46460600 + AluJo SINE Alu 5 302 -10 1767 150 39 3 chr20 25693504 25693790 -46460092 + AluJo SINE Alu 1 296 -16 1917 151 0 16 chr20 25694052 25694357 -46459525 + AluJb SINE Alu 1 300 -12 29 0 0 25 chr20 25694750 25694769 -46459113 + AT_rich Low_complexity Low_complexity 1 19 -20 2022 109 0 0 chr20 25694769 25695025 -46458857 + AluSx SINE Alu 33 288 -24 29 0 0 25 chr20 25695025 25695045 -46458837 + AT_rich Low_complexity Low_complexity 19 39 0 24 32 0 0 chr20 25695119 25695150 -46458732 + AT_rich Low_complexity Low_complexity 1 31 0 796 247 0 0 chr20 25695420 25695582 -46458300 - FRAM SINE Alu -7 169 8 2264 111 3 0 chr20 25695772 25696078 -46457804 + AluSp SINE Alu 1 307 -6 380 216 108 9 chr20 25697045 25697156 -46456726 - LTR67 LTR ERVL 0 557 436 325 277 27 85 chr20 25698180 25698368 -46455514 - L2 LINE L2 -82 3190 3014 275 265 47 103 chr20 25698628 25698859 -46455023 + MIR SINE MIR 22 249 -13 959 180 0 12 chr20 25699173 25699340 -46454542 + FRAM SINE Alu 1 165 -11 3614 109 9 0 chr20 25699863 25700397 -46453485 + L1MA5A LINE L1 5757 6295 -2 339 219 0 0 chr20 25700400 25700464 -46453418 + L2 LINE L2 2771 2834 -480 1059 179 14 29 chr20 25700502 25700709 -46453173 - AluJo SINE Alu -13 299 96 205 156 44 0 chr20 25701185 25701230 -46452652 + T-rich Low_complexity Low_complexity 4 50 0 1163 259 75 53 chr20 25701263 25701787 -46452095 - MLT1G1 LTR MaLR 0 595 20 1286 119 5 16 chr20 25702146 25702331 -46451551 + AluSg/x SINE Alu 112 294 -18 599 202 0 0 chr20 25702342 25702451 -46451431 + AluJo/FLAM SINE Alu 2 110 -202 371 206 0 0 chr20 25702453 25702516 -46451366 + AluJ/FRAM SINE Alu 226 288 -14 911 196 6 12 chr20 25702795 25702958 -46450924 + FRAM SINE Alu 1 159 -17 2267 115 3 0 chr20 25703041 25703336 -46450546 - AluSx SINE Alu -16 296 1 344 210 10 70 chr20 25705018 25705118 -46448764 - MER96 DNA MER1_type? 0 175 82 1960 159 3 0 chr20 25705323 25705618 -46448264 + AluJo SINE Alu 1 296 -16 354 212 7 95 chr20 25705742 25705768 -46448114 - MLT1K LTR MaLR -2 586 559 1962 134 3 23 chr20 25705768 25706073 -46447809 + AluSx SINE Alu 10 308 -4 354 212 7 95 chr20 25706073 25706183 -46447699 - MLT1K LTR MaLR -29 559 462 1092 137 47 26 chr20 25707416 25707649 -46446233 + L1MA7 LINE L1 6053 6290 -1 21 0 0 0 chr20 25707649 25707670 -46446212 + AT_rich Low_complexity Low_complexity 1 21 0 306 242 145 98 chr20 25707815 25708386 -46445496 + L1ME4a LINE L1 5524 6121 0 1153 264 67 23 chr20 25709096 25709482 -46444400 - LTR16C LTR ERVL 0 491 89 1884 154 3 19 chr20 25709986 25710297 -46443585 - AluJo SINE Alu -6 306 1 541 240 183 19 chr20 25710300 25710418 -46443464 - L1MD3 LINE L1 -804 7191 7094 189 74 0 0 chr20 25710418 25710445 -46443437 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 541 240 183 19 chr20 25710445 25710534 -46443348 - L1MD3 LINE L1 -901 7094 6950 2150 159 0 0 chr20 25710558 25710878 -46443004 - 7SLRNA srpRNA srpRNA 0 320 1 2327 83 105 0 chr20 25710911 25711034 -46442848 + MER41-int LTR ERV1 2637 2746 -3200 207 0 0 0 chr20 25711034 25711057 -46442825 + (TCTG)n Simple_repeat Simple_repeat 2 24 0 2327 83 105 0 chr20 25711057 25711284 -46442598 + MER41-int LTR ERV1 2746 3024 -2922 6363 69 41 5 chr20 25711293 25712435 -46441447 + L1PB1 LINE L1 4970 6142 -9 318 266 86 8 chr20 25713113 25713241 -46440641 + MIR SINE MIR 10 147 -115 578 240 179 68 chr20 25713271 25713680 -46440202 + LTR33 LTR ERVL 1 454 -67 2321 102 3 0 chr20 25714581 25714884 -46438998 + AluSx SINE Alu 3 306 -6 22 0 0 0 chr20 25715192 25715214 -46438668 + AT_rich Low_complexity Low_complexity 1 22 0 191 282 48 58 chr20 25715519 25715622 -46438260 + MIR SINE MIR 53 154 -108 2585 151 21 5 chr20 25716898 25717323 -46436559 + MSTB1 LTR MaLR 1 432 0 863 197 33 61 chr20 25717712 25717925 -46435957 - LTR16C LTR ERVL -27 464 258 219 259 62 25 chr20 25717936 25718017 -46435865 + MIR SINE MIR 160 243 -19 711 169 40 0 chr20 25718496 25718620 -46435262 + FRAM SINE Alu 9 137 -39 1212 256 99 27 chr20 25720796 25720946 -46432936 + MLT1G1 LTR MaLR 76 214 -381 3486 115 8 2 chr20 25720946 25721440 -46432442 + LOR1a LTR ERV1 1 497 0 1212 256 99 27 chr20 25721440 25721774 -46432108 + MLT1G1 LTR MaLR 214 595 0 40 31 0 15 chr20 25722312 25722359 -46431523 + AT_rich Low_complexity Low_complexity 1 48 -16 2131 127 3 0 chr20 25722359 25722651 -46431231 + AluSx SINE Alu 1 293 -19 40 31 0 15 chr20 25722651 25722668 -46431214 + AT_rich Low_complexity Low_complexity 48 64 0 686 156 37 0 chr20 25722668 25722777 -46431105 - AluJb SINE Alu -189 123 11 219 288 19 100 chr20 25723712 25723872 -46430010 + MIR SINE MIR 70 216 -46 215 220 0 20 chr20 25724133 25724183 -46429699 + GA-rich Low_complexity Low_complexity 1 49 0 390 210 74 68 chr20 25724330 25724507 -46429375 - MIR SINE MIR -62 146 16 217 245 179 9 chr20 25725525 25725631 -46428251 + MIR SINE MIR 35 158 -104 * 1949 289 171 15 chr20 25725626 25726588 -46427294 + L2 LINE L2 906 2017 -1297 1181 215 130 106 chr20 25726588 25727156 -46426726 - MLT1G1 LTR MaLR 0 595 14 2196 100 0 7 chr20 25727163 25727452 -46426430 + AluSq SINE Alu 17 303 -10 1246 268 95 10 chr20 25727484 25727980 -46425902 + L2 LINE L2 2065 2602 -712 2121 129 0 7 chr20 25728294 25728596 -46425286 - AluSg SINE Alu -10 300 1 604 264 50 81 chr20 25729868 25729909 -46423973 - LTR16A1 LTR ERVL 0 457 416 1403 162 6 105 chr20 25729909 25730242 -46423640 - AluY SINE Alu -11 300 1 604 264 50 81 chr20 25730242 25730496 -46423386 - LTR16A1 LTR ERVL -41 416 182 2318 98 7 0 chr20 25730695 25730992 -46422890 + AluSg SINE Alu 1 299 -11 1940 168 0 0 chr20 25731162 25731471 -46422411 - AluSx SINE Alu -3 309 1 1965 175 0 0 chr20 25732201 25732510 -46421372 + AluSx SINE Alu 1 309 -3 657 248 115 13 chr20 25732763 25733026 -46420856 - L1ME2 LINE L1 -70 6094 5796 264 284 30 0 chr20 25733919 25733986 -46419896 - L1ME2 LINE L1 -516 5654 5586 231 299 42 0 chr20 25734473 25734592 -46419290 - MIR SINE MIR -23 185 63 834 268 154 22 chr20 25734695 25735110 -46418772 + LTR33 LTR ERVL 44 513 -8 1661 224 128 17 chr20 25735267 25735909 -46417973 + L1ME3A LINE L1 5368 6111 -59 1416 167 7 43 chr20 25735913 25736189 -46417693 - AluJo SINE Alu -9 303 38 296 209 11 44 chr20 25738523 25738614 -46415268 - L1ME LINE L1 -303 5818 5731 4252 91 1 59 chr20 25739198 25739654 -46414228 - MER4B LTR ERV1 0 610 200 2186 109 0 3 chr20 25739654 25739938 -46413944 - AluSx SINE Alu -28 284 2 4252 91 1 59 chr20 25739938 25740128 -46413754 - MER4B LTR ERV1 -410 200 1 320 294 99 14 chr20 25740189 25740410 -46413472 + L2 LINE L2 2895 3134 -179 7365 137 70 116 chr20 25740412 25742191 -46411691 + pTR5 LTR ERV1 743 2438 0 285 335 28 33 chr20 25742192 25742374 -46411508 + L2 LINE L2 3130 3310 -3 261 83 0 0 chr20 25742487 25742523 -46411359 + (TCCCC)n Simple_repeat Simple_repeat 1 36 0 1598 185 34 0 chr20 25742533 25742798 -46411084 - AluJb SINE Alu -38 274 1 404 300 31 0 chr20 25743429 25743559 -46410323 + LTR16C LTR ERVL 152 285 -206 2386 86 0 3 chr20 25743771 25744073 -46409809 - AluY SINE Alu -10 301 1 2127 191 57 7 chr20 25744194 25744633 -46409249 - LOR1b LTR ERV1 0 461 1 239 29 147 0 chr20 25745319 25745353 -46408529 - U2 snRNA snRNA -136 52 14 650 279 98 17 chr20 25745493 25745780 -46408102 + LTR16C LTR ERVL 181 490 -1 1893 109 60 8 chr20 25745862 25746157 -46407725 - AluSc SINE Alu 0 309 1 531 221 12 2 chr20 25746713 25746847 -46407035 + MLT1H LTR MaLR 1 174 -375 1020 204 55 68 chr20 25746861 25747170 -46406712 - MLT1C LTR MaLR -129 338 34 1570 118 4 9 chr20 25747269 25747497 -46406385 + AluJb SINE Alu 85 311 -1 2914 214 55 45 chr20 25747578 25747607 -46406275 - L1M4 LINE L1 -1364 4782 4755 2022 123 0 60 chr20 25747607 25747925 -46405957 - AluSq SINE Alu -14 299 1 2914 214 55 45 chr20 25747925 25748690 -46405192 - L1M4 LINE L1 -1391 4755 3980 2124 131 0 0 chr20 25748699 25748997 -46404885 - AluSq SINE Alu -15 298 1 1505 154 9 109 chr20 25750363 25750693 -46403189 + AluJo SINE Alu 2 298 -4 407 297 166 4 chr20 25750795 25751024 -46402858 + L1ME3A LINE L1 5459 5724 -446 1491 170 207 11 chr20 25751030 25751383 -46402499 + MER39 LTR ERV1 4 425 -282 24 96 0 0 chr20 25751383 25751456 -46402426 + AT_rich Low_complexity Low_complexity 1 73 0 2050 115 7 3 chr20 25751468 25751754 -46402128 + AluSx SINE Alu 24 310 -2 1181 165 35 89 chr20 25751785 25752101 -46401781 + MER39 LTR ERV1 409 707 0 410 214 0 51 chr20 25752101 25752199 -46401683 + L1ME3A LINE L1 5723 5815 -355 237 237 17 0 chr20 25752199 25752258 -46401624 + L1ME3A LINE L1 6106 6165 -5 277 231 26 51 chr20 25752990 25753107 -46400775 - L1MA10 LINE L1 -7 6327 6214 1475 178 3 68 chr20 25753575 25753912 -46399970 - MLT1B LTR MaLR -70 320 6 577 291 118 63 chr20 25754861 25755332 -46398550 + Charlie8 DNA MER1_type 1 485 -1932 288 111 0 0 chr20 25756427 25756472 -46397410 + (TG)n Simple_repeat Simple_repeat 1 45 0 871 223 100 76 chr20 25756568 25756778 -46397104 - L1MC5 LINE L1 -41 7920 7717 1942 137 0 0 chr20 25756778 25757119 -46396763 - AluSx SINE Alu 0 341 1 871 223 100 76 chr20 25757119 25757365 -46396517 - L1MC5 LINE L1 -244 7717 7452 1042 273 129 27 chr20 25757694 25758182 -46395700 + MLT1H LTR MaLR 12 549 0 192 97 0 0 chr20 25758209 25758240 -46395642 + (CA)n Simple_repeat Simple_repeat 1 31 0 485 330 70 13 chr20 25758695 25758925 -46394957 - MIR SINE MIR 0 262 20 21 0 0 0 chr20 25758938 25758959 -46394923 + AT_rich Low_complexity Low_complexity 1 21 0 988 268 90 38 chr20 25759219 25759619 -46394263 + LTR16C LTR ERVL 67 487 -4 210 236 90 67 chr20 25759633 25759722 -46394160 + L2 LINE L2 2422 2512 -802 298 267 0 33 chr20 25759879 25759969 -46393913 - MIR SINE MIR 0 262 176 1951 213 56 11 chr20 25760152 25760613 -46393269 + L1MC3 LINE L1 6144 6625 -1160 1741 156 38 63 chr20 25760616 25760963 -46392919 - MER7A DNA MER2_type -1 345 10 5322 198 20 19 chr20 25760965 25762090 -46391792 + L1MC3 LINE L1 6642 7768 -17 2237 102 0 6 chr20 25762099 25762447 -46391435 + AluSx SINE Alu 1 312 0 2295 75 0 3 chr20 25763228 25763533 -46390349 + AluY SINE Alu 1 304 -7 1327 176 13 63 chr20 25763546 25763847 -46390035 + AluJo SINE Alu 1 286 -16 343 242 76 45 chr20 25764002 25764134 -46389748 + LTR16C LTR ERVL 72 207 -284 446 241 53 10 chr20 25764194 25764381 -46389501 + LTR16A1 LTR ERVL 298 457 0 249 276 11 23 chr20 25764563 25764651 -46389231 + LTR16B LTR ERVL 372 444 -6 186 43 0 0 chr20 25765011 25765034 -46388848 + (TC)n Simple_repeat Simple_repeat 2 24 0 1959 108 4 0 chr20 25765043 25765322 -46388560 - AluSx SINE Alu -32 280 1 1062 187 39 10 chr20 25765521 25765724 -46388158 - MER20 DNA MER1_type -4 215 7 629 233 190 5 chr20 25766165 25766349 -46387533 + MIR SINE MIR 31 255 -7 831 219 26 0 chr20 25766714 25766869 -46387013 + FRAM SINE Alu 1 157 -19 1995 120 17 0 chr20 25766889 25767188 -46386694 + AluSx SINE Alu 1 304 -8 421 202 17 135 chr20 25767200 25767378 -46386504 + MIR SINE MIR 106 262 0 586 277 18 6 chr20 25767438 25767604 -46386278 - MER20 DNA MER1_type -51 168 1 2082 118 0 0 chr20 25768081 25768370 -46385512 - AluSx SINE Alu -21 291 3 326 263 228 9 chr20 25768541 25768655 -46385227 - MER5A DNA MER1_type -31 158 20 321 26 0 0 chr20 25768786 25768824 -46385058 + (TG)n Simple_repeat Simple_repeat 2 39 0 221 235 118 13 chr20 25769786 25769877 -46384005 + MIR SINE MIR 38 136 -72 1977 216 78 33 chr20 25770089 25770787 -46383095 - L1ME2 LINE L1 -33 6131 5349 1684 137 13 48 chr20 25770787 25771100 -46382782 + AluJo SINE Alu 1 302 -10 1977 216 78 33 chr20 25771100 25771238 -46382644 - L1ME2 LINE L1 -815 5349 5219 494 224 99 13 chr20 25771814 25771966 -46381916 - MLT1H LTR MaLR 0 549 385 566 258 167 18 chr20 25772174 25772395 -46381487 - LTR16C LTR ERVL 0 491 238 1863 126 51 3 chr20 25772748 25773041 -46380841 - AluJo SINE Alu -5 307 1 1309 186 72 4 chr20 25773938 25774201 -46379681 + AluJo SINE Alu 1 281 -31 420 20 0 0 chr20 25774202 25774251 -46379631 + (TG)n Simple_repeat Simple_repeat 1 49 0 228 306 0 0 chr20 25774383 25774445 -46379437 - L1MC/D LINE L1 -1903 5905 5844 301 143 0 86 chr20 25774463 25774533 -46379349 - MLT2C1 LTR ERVL 0 397 334 1361 227 125 36 chr20 25774554 25774994 -46378888 - MLT2B1 LTR ERVL -41 479 1 834 262 109 0 chr20 25775018 25775266 -46378616 - L1MC/D LINE L1 -2012 5796 5522 606 255 95 61 chr20 25775276 25775602 -46378280 + MLT1K LTR MaLR 183 519 -69 2026 112 7 7 chr20 25775605 25775908 -46377974 - AluJb SINE Alu -9 303 1 871 107 38 0 chr20 25776337 25776468 -46377414 - AluJo SINE Alu -176 136 1 220 233 23 0 chr20 25776798 25776841 -46377041 + MER91 DNA MER1_type 130 173 -17 886 230 78 8 chr20 25776855 25777112 -46376770 - LTR16C LTR ERVL -2 489 215 237 257 86 0 chr20 25777383 25777453 -46376429 + L2 LINE L2 3155 3230 -42 853 207 58 13 chr20 25777461 25777701 -46376181 - LTR35 LTR ERV1 -1 676 432 320 114 38 89 chr20 25777719 25777798 -46376084 - LTR43 LTR ERV1 -345 257 183 1317 192 77 0 chr20 25779875 25780183 -46373699 - AluJo SINE Alu 0 328 1 2049 133 0 3 chr20 25780876 25781177 -46372705 + AluSx SINE Alu 1 300 -12 1580 170 20 24 chr20 25781508 25781802 -46372080 - AluJo SINE Alu -16 296 4 257 264 113 28 chr20 25782060 25782166 -46371716 + MLT1J LTR MaLR 26 140 -371 3019 109 7 2 chr20 25782181 25782613 -46371269 + MER57B LTR ERV1 1 434 0 3190 108 63 24 chr20 25782735 25783356 -46370526 - LTR8A LTR ERV1 0 727 1 2533 110 11 14 chr20 25783847 25784210 -46369672 - LTR8 LTR ERV1 0 691 330 2997 145 82 36 chr20 25784210 25784761 -46369121 + LTR9 LTR ERV1 37 612 0 2059 139 0 9 chr20 25784769 25785085 -46368797 - LTR8 LTR ERV1 -376 315 3 2235 48 48 3 chr20 25785463 25785754 -46368128 - AluY SINE Alu -7 304 1 218 257 189 27 chr20 25785992 25786066 -46367816 + MIR3 SINE MIR 96 181 -27 1890 154 138 54 chr20 25786306 25786786 -46367096 + MLT2B1 LTR ERVL 1 520 0 2200 133 99 35 chr20 25786855 25787379 -46366503 + LTR35 LTR ERV1 1 618 0 4528 147 62 25 chr20 25787620 25788490 -46365392 - MER4D LTR ERV1 0 862 1 238 184 0 0 chr20 25788673 25788711 -46365171 + MER34C LTR ERV1 4 41 -544 1203 214 115 45 chr20 25789019 25789481 -46364401 + LTR54B LTR ERV1 1 494 -4 1090 234 146 68 chr20 25789913 25790044 -46363838 + MER34C LTR ERV1 1 120 -465 2440 77 0 0 chr20 25790044 25790355 -46363527 + AluY SINE Alu 1 311 0 1090 234 146 68 chr20 25790355 25790766 -46363116 + MER34C LTR ERV1 120 585 0 830 171 167 16 chr20 25791006 25791143 -46362739 - MER63 DNA MER1_type -77 985 870 2246 113 0 0 chr20 25791143 25791453 -46362429 - AluSx SINE Alu -2 310 1 830 171 167 16 chr20 25791453 25791560 -46362322 - MER63 DNA MER1_type -192 870 704 2560 145 48 24 chr20 25791560 25791806 -46362076 + LTR24 LTR ERV1 1 265 -202 1660 152 7 7 chr20 25791806 25792102 -46361780 + AluJb SINE Alu 1 296 -16 2560 145 48 24 chr20 25792102 25792311 -46361571 + LTR24 LTR ERV1 265 467 0 388 231 60 0 chr20 25792778 25792895 -46360987 - LTR33 LTR ERVL -89 432 309 315 274 20 41 chr20 25793327 25793473 -46360409 + HAL1 LINE L1 999 1141 -1366 301 274 53 18 chr20 25793642 25793755 -46360127 - LTR16A LTR ERVL -229 221 105 454 331 61 51 chr20 25793968 25794457 -46359425 - ERVL LTR ERVL -377 5387 4894 955 156 9 108 chr20 25794465 25794599 -46359283 + MER3 DNA MER1_type 2 105 -104 1523 148 133 11 chr20 25794599 25794863 -46359019 + AluJb SINE Alu 1 296 -6 955 156 9 108 chr20 25794863 25794959 -46358923 + MER3 DNA MER1_type 105 209 0 661 344 80 18 chr20 25795012 25796197 -46357685 - ERVL LTR ERVL -923 4841 3522 798 279 75 18 chr20 25796281 25796589 -46357293 - LTR16A LTR ERVL -107 350 28 305 212 45 0 chr20 25796634 25796700 -46357182 + HAL1 LINE L1 1425 1493 -1014 1496 163 30 30 chr20 25797739 25797906 -46355976 - AluJb SINE Alu -12 300 131 2178 117 0 0 chr20 25797906 25798213 -46355669 - AluSx SINE Alu -5 307 1 1496 163 30 30 chr20 25798213 25798345 -46355537 - AluJb SINE Alu -180 132 1 426 303 130 23 chr20 25798624 25798924 -46354958 - L1ME2 LINE L1 0 6164 5833 1037 168 50 23 chr20 25798963 25799183 -46354699 - LTR16C LTR ERVL -4 487 262 434 188 10 0 chr20 25799953 25800049 -46353833 + GA-rich Low_complexity Low_complexity 2 98 0 276 159 37 19 chr20 25800103 25800210 -46353672 + GA-rich Low_complexity Low_complexity 2 110 0 532 275 82 77 chr20 25800212 25800565 -46353317 - LTR16B LTR ERVL -92 372 18 35 0 0 0 chr20 25800646 25800681 -46353201 + AT_rich Low_complexity Low_complexity 1 35 0 409 161 0 25 chr20 25800887 25800968 -46352914 + MIR SINE MIR 61 139 -123 1797 158 49 35 chr20 25800987 25801355 -46352527 + THE1C LTR MaLR 1 373 -2 9976 130 11 22 chr20 25801359 25802956 -46350926 + THE1C-int LTR MaLR 3 1580 0 1875 134 56 39 chr20 25802956 25803313 -46350569 + THE1C LTR MaLR 1 363 -12 1638 189 27 3 chr20 25803313 25803614 -46350268 - AluJb SINE Alu -4 308 1 1893 122 7 4 chr20 25804539 25804818 -46349064 + AluSx SINE Alu 1 280 -32 207 186 0 0 chr20 25804820 25804863 -46349019 + (CA)n Simple_repeat Simple_repeat 2 44 0 578 245 69 69 chr20 25805279 25805540 -46348342 + LTR16C LTR ERVL 231 491 0 511 335 113 36 chr20 25805866 25806415 -46347467 - L2 LINE L2 -546 2768 2178 * 773 213 27 43 chr20 25806404 25806592 -46347290 + MER5A DNA MER1_type 5 189 0 353 164 16 0 chr20 25806600 25806661 -46347221 + MER5B DNA MER1_type 1 62 -116 814 169 52 12 chr20 25806663 25806835 -46347047 + AluJb SINE Alu 130 308 -4 2106 115 3 6 chr20 25806838 25807151 -46346731 + AluSx SINE Alu 1 312 0 470 170 0 100 chr20 25807213 25807313 -46346569 - MER81 DNA DNA -1 113 24 297 200 29 14 chr20 25807317 25807387 -46346495 + MER5B DNA MER1_type 108 178 0 525 256 25 38 chr20 25807409 25807569 -46346313 - MER5B DNA MER1_type -16 162 5 200 280 0 0 chr20 25807917 25807967 -46345915 + CT-rich Low_complexity Low_complexity 4 53 0 2377 84 0 0 chr20 25808558 25808866 -46345016 - AluSc SINE Alu -1 308 1 202 204 19 37 chr20 25809011 25809065 -46344817 + CT-rich Low_complexity Low_complexity 3 55 0 2178 102 3 0 chr20 25810389 25810694 -46343188 + AluSx SINE Alu 1 306 -6 1677 158 132 42 chr20 25811106 25811486 -46342396 - MLT2D LTR ERVL 0 414 1 2739 115 33 9 chr20 25811897 25812316 -46341566 + MSTB1 LTR MaLR 1 429 -3 1710 173 23 3 chr20 25812362 25812663 -46341219 - AluSx SINE Alu -5 307 1 1824 231 123 15 chr20 25812707 25813187 -46340695 + MLT1H LTR MaLR 3 534 -15 3546 115 19 8 chr20 25813748 25814269 -46339613 + MER1A DNA MER1_type 1 527 0 311 280 195 28 chr20 25814703 25814877 -46339005 - MIR SINE MIR -56 152 19 1424 56 0 0 chr20 25815039 25815218 -46338664 + AluY SINE Alu 133 311 0 2240 43 11 0 chr20 25816786 25817088 -46336794 - AluY SINE Alu 0 305 1 207 189 11 44 chr20 25817718 25817808 -46336074 + G-rich Low_complexity Low_complexity 5 91 0 187 186 17 17 chr20 25817810 25817869 -46336013 + GA-rich Low_complexity Low_complexity 3 61 0 1793 143 7 20 chr20 25818496 25818790 -46335092 - AluSx SINE Alu -22 290 1 1080 198 12 65 chr20 25819299 25819547 -46334335 + MER8 DNA MER2_type 2 236 -3 284 366 6 0 chr20 25820668 25820840 -46333042 + (TG)n Simple_repeat Simple_repeat 1 173 0 321 256 173 51 chr20 25822130 25822286 -46331596 + MER5A DNA MER1_type 9 183 -6 987 176 0 0 chr20 25822552 25822722 -46331160 - AluJo SINE Alu -28 284 115 31 0 0 0 chr20 25822729 25822760 -46331122 + AT_rich Low_complexity Low_complexity 1 31 0 737 154 49 16 chr20 25822763 25822886 -46330996 - AluJo SINE Alu -174 128 2 244 254 99 63 chr20 25822891 25823033 -46330849 - L2 LINE L2 -56 3257 3111 202 333 121 20 chr20 25823130 25823229 -46330653 + L3b LINE CR1 1475 1583 0 28 29 0 0 chr20 25824098 25824133 -46329749 + AT_rich Low_complexity Low_complexity 1 35 0 1268 148 125 43 chr20 25824137 25824393 -46329489 - AluJo SINE Alu -30 282 6 2155 140 135 5 chr20 25824435 25824814 -46329068 - MSTA LTR MaLR 0 428 1 6952 164 12 13 chr20 25824814 25825967 -46327915 - MSTA-int LTR MaLR 0 1580 429 862 182 0 0 chr20 25826988 25827136 -46326746 - MSTA-int LTR MaLR -1167 484 337 33 25 0 0 chr20 25827136 25827176 -46326706 + AT_rich Low_complexity Low_complexity 1 40 0 672 124 0 0 chr20 25827181 25827270 -46326612 - AluJ/FLAM SINE Alu -222 90 2 2326 128 3 0 chr20 25827270 25827621 -46326261 - MSTA-int LTR MaLR -1299 352 1 2321 110 131 8 chr20 25827621 25828002 -46325880 - MSTA LTR MaLR 0 428 1 192 289 118 37 chr20 25828771 25828906 -46324976 - L2 LINE L2 -837 2477 2332 271 229 0 0 chr20 25828944 25829005 -46324877 + (TA)n Simple_repeat Simple_repeat 1 61 0 2411 57 0 0 chr20 25829905 25830202 -46323680 + AluY SINE Alu 1 297 -14 284 310 146 57 chr20 25830804 25830962 -46322920 - L2 LINE L2 -4 3268 3097 201 341 38 73 chr20 25831009 25831074 -46322808 - L2 LINE L2 -510 2804 2738 2213 115 0 0 chr20 25831074 25831379 -46322503 - AluSx SINE Alu -3 309 5 201 341 38 73 chr20 25831379 25831574 -46322308 - L2 LINE L2 -576 2738 2553 318 26 0 0 chr20 25832180 25832219 -46321663 + (CA)n Simple_repeat Simple_repeat 1 39 0 1918 149 0 0 chr20 25833952 25834247 -46319635 - AluSx SINE Alu -17 295 1 739 194 10 75 chr20 25834540 25834741 -46319141 - L1MA10 LINE L1 -1 6333 6146 839 224 36 0 chr20 25835837 25836033 -46317849 - MER3 DNA MER1_type -6 203 1 1464 158 55 48 chr20 25837174 25837334 -46316548 - AluJo SINE Alu -19 293 129 2081 78 10 26 chr20 25837334 25837640 -46316242 - AluY SINE Alu -10 301 1 1464 158 55 48 chr20 25837640 25837770 -46316112 - AluJo SINE Alu -183 129 1 381 283 141 4 chr20 25838566 25838765 -46315117 + MIR SINE MIR 30 262 0 1700 155 20 3 chr20 25839105 25839223 -46314659 + AluJb SINE Alu 1 116 -196 234 91 0 0 chr20 25839223 25839256 -46314626 + (CAAA)n Simple_repeat Simple_repeat 4 36 0 1700 155 20 3 chr20 25839256 25839434 -46314448 + AluJb SINE Alu 116 302 -10 498 193 175 0 chr20 25840395 25840509 -46313373 + MIR SINE MIR 123 256 -6 348 321 78 37 chr20 25841274 25841517 -46312365 - MIR SINE MIR -9 253 1 2472 53 0 0 chr20 25841933 25842237 -46311645 - AluY SINE Alu -7 304 1 2003 161 85 0 chr20 25842344 25842734 -46311148 + Charlie4a DNA MER1_type 20 442 -66 23 0 0 0 chr20 25842922 25842945 -46310937 + AT_rich Low_complexity Low_complexity 1 23 0 336 264 47 16 chr20 25843779 25843908 -46309974 - MER94 DNA DNA 0 134 2 243 279 121 55 chr20 25845308 25845746 -46308136 + L1M4 LINE L1 2254 2720 -3426 516 288 88 18 chr20 25845890 25846220 -46307662 + L1M4 LINE L1 2786 3138 -3008 2018 115 3 3 chr20 25846366 25846670 -46307212 + AluJb SINE Alu 7 310 -2 434 228 35 76 chr20 25847102 25847299 -46306583 - L1ME3A LINE L1 -228 5942 5754 1011 194 14 67 chr20 25847307 25847591 -46306291 - L1MA7 LINE L1 -9 6282 6014 275 273 197 8 chr20 25849168 25849300 -46304582 + MIR3 SINE MIR 33 189 -19 465 270 107 64 chr20 25849392 25849523 -46304359 + MIR SINE MIR 20 167 -95 1878 171 0 0 chr20 25849523 25849833 -46304049 + AluJb SINE Alu 1 310 -2 465 270 107 64 chr20 25849833 25849934 -46303948 + MIR SINE MIR 167 262 0 372 267 29 0 chr20 25850036 25850141 -46303741 + MLT1J2 LTR MaLR 33 140 -310 317 284 42 79 chr20 25850186 25850376 -46303506 + MLT1J LTR MaLR 242 463 -22 548 136 23 0 chr20 25850391 25850479 -46303403 - AluJb SINE Alu -3 309 220 * 843 145 110 0 chr20 25850472 25850617 -46303265 - AluJb SINE Alu -148 164 4 30 45 0 30 chr20 25850654 25850686 -46303196 + AT_rich Low_complexity Low_complexity 1 32 -32 1460 191 7 28 chr20 25850686 25850974 -46302908 + AluJo SINE Alu 1 282 -30 30 45 0 30 chr20 25850974 25851007 -46302875 + AT_rich Low_complexity Low_complexity 32 64 0 40 21 0 0 chr20 25851389 25851436 -46302446 + AT_rich Low_complexity Low_complexity 1 47 0 248 368 81 19 chr20 25851820 25852127 -46301755 - L2 LINE L2 -559 2755 2430 441 0 0 0 chr20 25852382 25852431 -46301451 + (TG)n Simple_repeat Simple_repeat 2 50 0 384 294 91 43 chr20 25853036 25853223 -46300659 + MIR SINE MIR 48 243 -19 305 263 33 33 chr20 25853958 25854110 -46299772 + L1MC4a LINE L1 4902 5053 -1093 2209 157 111 0 chr20 25854146 25854553 -46299329 - LTR47A LTR ERVL 0 452 1 3223 247 61 14 chr20 25854569 25855547 -46298335 + L1MC4a LINE L1 5254 6277 -1531 508 301 203 8 chr20 25856015 25856404 -46297478 - L2 LINE L2 -13 3300 2836 21 0 0 0 chr20 25856731 25856752 -46297130 + AT_rich Low_complexity Low_complexity 1 21 0 2054 134 16 3 chr20 25857828 25858212 -46295670 + AluSx SINE Alu 1 388 0 377 146 27 36 chr20 25859165 25859275 -46294607 + (CATA)n Simple_repeat Simple_repeat 3 111 0 974 183 154 8 chr20 25862210 25862450 -46291432 + L1MC2 LINE L1 6029 6303 -41 22 0 0 0 chr20 25862495 25862517 -46291365 + AT_rich Low_complexity Low_complexity 1 22 0 771 103 8 17 chr20 25862517 25862634 -46291248 + AluY SINE Alu 23 138 -173 2277 117 0 0 chr20 25862645 25862954 -46290928 + AluSx SINE Alu 1 309 -3 21 57 0 0 chr20 25862955 25862990 -46290892 + AT_rich Low_complexity Low_complexity 1 35 0 475 159 34 0 chr20 25863627 25863715 -46290167 + AluSg/x SINE Alu 205 295 -15 1260 259 227 8 chr20 25864324 25864796 -46289086 + MLT1E1 LTR MaLR 19 654 0 1032 258 101 21 chr20 25865269 25865657 -46288225 + MLT1J2 LTR MaLR 9 427 -23 22 0 0 0 chr20 25865869 25865891 -46287991 + AT_rich Low_complexity Low_complexity 1 22 0 1920 132 3 17 chr20 25865999 25866286 -46287596 - AluJb SINE Alu -29 283 1 218 370 67 0 chr20 25866595 25866714 -46287168 + L2 LINE L2 3146 3272 0 2364 62 0 17 chr20 25867182 25867473 -46286409 + AluSx SINE Alu 1 286 -26 219 114 0 0 chr20 25867475 25867510 -46286372 + (GGGAGA)n Simple_repeat Simple_repeat 3 37 0 1198 219 39 82 chr20 25867638 25868103 -46285779 + LTR56 LTR ERV1 1 445 0 2280 110 0 3 chr20 25868522 25868831 -46285051 + AluSg SINE Alu 1 308 -2 2138 153 42 11 chr20 25870761 25871115 -46282767 + MLT1A1 LTR MaLR 1 365 0 42 89 0 0 chr20 25871886 25871998 -46281884 + AT_rich Low_complexity Low_complexity 1 112 0 1035 246 59 42 chr20 25872136 25872365 -46281517 - MER115 DNA AcHobo -11 682 445 2739 137 33 5 chr20 25872365 25872787 -46281095 - MER61C LTR ERV1 0 434 1 1035 246 59 42 chr20 25872787 25872846 -46281036 - MER115 DNA AcHobo -248 445 389 375 296 53 23 chr20 25872920 25873052 -46280830 - MER115 DNA AcHobo -434 259 124 * 542 277 191 41 chr20 25873050 25873364 -46280518 + LTR16B LTR ERVL 104 464 0 2500 85 0 0 chr20 25873475 25873781 -46280101 - AluY SINE Alu -5 306 1 579 177 69 15 chr20 25873792 25873922 -46279960 - L1MD2 LINE L1 -2 6357 6221 538 313 13 31 chr20 25873925 25874149 -46279733 + L2 LINE L2 2199 2418 -896 411 315 0 0 chr20 25874229 25874337 -46279545 + L2 LINE L2 3206 3313 0 253 98 20 20 chr20 25874555 25874606 -46279276 + (TTCC)n Simple_repeat Simple_repeat 1 51 0 2238 127 0 0 chr20 25874813 25875113 -46278769 - AluSg SINE Alu -10 300 1 726 283 97 4 chr20 25875167 25875393 -46278489 + MIR SINE MIR 3 249 -13 1101 252 86 16 chr20 25876556 25876870 -46277012 - LTR16C LTR ERVL -2 489 154 303 149 0 0 chr20 25876926 25876973 -46276909 - MLT1H LTR MaLR -2 547 501 25 0 0 0 chr20 25876992 25877017 -46276865 + AT_rich Low_complexity Low_complexity 1 25 0 268 276 77 83 chr20 25877191 25877347 -46276535 - MLT1H LTR MaLR -274 275 121 382 186 0 12 chr20 25877354 25877440 -46276442 - MER53 DNA DNA -1 188 104 2436 188 33 39 chr20 25877451 25877494 -46276388 - MLT2B2 LTR ERVL -1 514 472 835 26 64 13 chr20 25877494 25877650 -46276232 + (TAGA)n Simple_repeat Simple_repeat 3 166 0 2436 188 33 39 chr20 25877650 25878123 -46275759 - MLT2B2 LTR ERVL -43 472 1 180 111 0 0 chr20 25878989 25879016 -46274866 + (TCTG)n Simple_repeat Simple_repeat 2 28 0 283 298 61 15 chr20 25879641 25879772 -46274110 - MIR3 SINE MIR -12 196 60 379 314 22 7 chr20 25879782 25879919 -46273963 - LTR16A1 LTR ERVL 0 457 319 260 26 0 26 chr20 25880077 25880115 -46273767 + (CAAA)n Simple_repeat Simple_repeat 1 37 0 1235 141 31 16 chr20 25880786 25880977 -46272905 + AluJo SINE Alu 1 194 -118 1294 159 0 5 chr20 25880977 25881197 -46272685 - MER83B LTR ERV1 0 378 160 628 144 303 0 chr20 25881195 25881327 -46272555 + LTR39 LTR ERV1 183 354 -429 * 1613 154 85 13 chr20 25881319 25881624 -46272258 + LTR39 LTR ERV1 457 783 0 656 104 83 0 chr20 25881624 25881719 -46272163 + MER89 LTR ERV1 242 344 -215 1903 182 30 14 chr20 25881728 25881826 -46272056 - MER61B LTR ERV1 -29 396 301 459 0 0 0 chr20 25881826 25881877 -46272005 + (CA)n Simple_repeat Simple_repeat 2 52 0 1903 182 30 14 chr20 25881877 25882141 -46271741 - MER61B LTR ERV1 -124 301 28 1145 200 23 0 chr20 25882223 25882438 -46271444 + MER89 LTR ERV1 340 559 0 225 247 0 25 chr20 25882453 25882534 -46271348 + L1P4 LINE L1 5362 5440 -734 464 249 124 12 chr20 25882549 25882786 -46271096 + L1M2 LINE L1 5564 5828 -303 2234 170 23 9 chr20 25883444 25883874 -46270008 + LTR1B LTR ERV1 1 436 -390 696 223 198 0 chr20 25883869 25884071 -46269811 + LTR1B LTR ERV1 585 826 0 * 428 218 18 36 chr20 25884305 25884415 -46269467 - LTR36 LTR ERV1 -57 554 447 242 54 0 27 chr20 25884418 25884455 -46269427 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 741 135 9 0 chr20 25884455 25884566 -46269316 - FRAM SINE Alu -28 148 37 568 171 121 200 chr20 25884586 25884901 -46268981 - LTR36 LTR ERV1 -198 413 124 2047 155 0 0 chr20 25886409 25886700 -46267182 - AluSx SINE Alu -21 291 1 1372 280 55 12 chr20 25886908 25887311 -46266571 - LTR16C LTR ERVL 0 491 72 6562 220 73 32 chr20 25888385 25891012 -46262870 + L1M4 LINE L1 1 2863 -3962 5042 207 37 22 chr20 25890996 25892213 -46261669 + L1M4 LINE L1 4542 5776 -868 * 228 311 22 0 chr20 25892232 25892322 -46261560 + L2 LINE L2 2992 3083 -189 211 229 114 48 chr20 25893101 25893206 -46260676 - L3 LINE CR1 -174 1403 1292 748 296 86 44 chr20 25894300 25894962 -46258920 + L1M4 LINE L1 4446 5135 -1011 2276 179 82 10 chr20 25895044 25895531 -46258351 - MER63C DNA MER1_type -408 522 1 44 20 0 0 chr20 25895664 25895715 -46258167 + AT_rich Low_complexity Low_complexity 1 51 0 1248 240 48 67 chr20 25896345 25896370 -46257512 + LTR16A1 LTR ERVL 3 27 -430 2512 129 3 3 chr20 25896370 25896734 -46257148 - THE1B LTR MaLR 0 364 1 1248 240 48 67 chr20 25896734 25897170 -46256712 + LTR16A1 LTR ERVL 27 455 -2 335 271 29 0 chr20 25897935 25898075 -46255807 + L1M4 LINE L1 3630 3773 -2871 25 0 0 0 chr20 25898271 25898296 -46255586 + AT_rich Low_complexity Low_complexity 1 25 0 299 145 277 0 chr20 25898362 25898445 -46255437 - LTR16C LTR ERVL -3 488 383 682 285 142 24 chr20 25898546 25898956 -46254926 + MLT1H1 LTR MaLR 91 548 -7 426 228 81 13 chr20 25898987 25899136 -46254746 - LTR16C LTR ERVL -160 331 173 242 308 56 30 chr20 25899282 25899480 -46254402 + L2 LINE L2 2846 3048 -224 592 264 49 79 chr20 25899481 25899746 -46254136 - MLT1K LTR MaLR -1 587 331 512 252 131 19 chr20 25900413 25900589 -46253293 - L1ME3A LINE L1 -9 6161 5956 1877 121 0 0 chr20 25900589 25900903 -46252979 - AluSx SINE Alu 0 338 25 512 252 131 19 chr20 25900903 25900931 -46252951 - L1ME3A LINE L1 -214 5956 5933 * 1412 218 35 13 chr20 25900914 25901244 -46252638 - L1ME3A LINE L1 -339 5831 5516 207 69 0 0 chr20 25901329 25901358 -46252524 + (TGAA)n Simple_repeat Simple_repeat 4 32 0 293 358 71 8 chr20 25902069 25902337 -46251545 + L2 LINE L2 2025 2309 -1005 604 267 12 12 chr20 25902528 25902700 -46251182 + LTR16A1 LTR ERVL 267 438 -19 477 311 0 6 chr20 25902910 25903087 -46250795 + C-rich Low_complexity Low_complexity 2 177 0 470 285 149 46 chr20 25903218 25903541 -46250341 + MLT1J2 LTR MaLR 64 419 -31 209 314 71 18 chr20 25903569 25903738 -46250144 + L2 LINE L2 2558 2735 -579 496 255 180 15 chr20 25906114 25906314 -46247568 - MIR SINE MIR -21 241 9 1862 205 79 15 chr20 25906360 25906858 -46247024 + L1ME3A LINE L1 5631 6163 -7 24 0 0 0 chr20 25907376 25907400 -46246482 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr20 25908029 25908051 -46245831 + AT_rich Low_complexity Low_complexity 1 22 0 974 117 7 0 chr20 25908051 25908196 -46245686 - L1PB1 LINE L1 -1 6150 6005 189 0 0 0 chr20 25908466 25908487 -46245395 + (TG)n Simple_repeat Simple_repeat 2 22 0 1884 274 69 8 chr20 25908529 25909120 -46244762 - L1ME3A LINE L1 -5 6165 5539 243 0 0 0 chr20 25909478 25909505 -46244377 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1624 193 69 33 chr20 25910190 25910640 -46243242 - MLT1C LTR MaLR -1 466 1 1031 300 50 5 chr20 25910645 25911025 -46242857 - LTR16A1 LTR ERVL 0 457 61 1197 143 29 29 chr20 25911257 25911466 -46242416 + Tigger2a DNA MER2_type 1 209 -225 539 185 22 0 chr20 25911476 25911568 -46242314 - FRAM SINE Alu -60 116 23 1117 60 16 28 chr20 25911596 25911778 -46242104 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 490 211 54 27 chr20 25911788 25911811 -46242071 + Tigger2a DNA MER2_type 197 218 -2500 1458 194 92 0 chr20 25911811 25912095 -46241787 - AluJo SINE Alu -2 310 1 490 211 54 27 chr20 25912095 25912218 -46241664 + Tigger2a DNA MER2_type 218 347 -97 392 219 76 62 chr20 25912265 25912475 -46241407 + LTR16C LTR ERVL 245 491 0 2498 200 80 26 chr20 25912682 25913342 -46240540 - L1ME2 LINE L1 -8 6156 5461 243 229 82 0 chr20 25913687 25913748 -46240134 + MLT1H LTR MaLR 479 544 -5 232 246 16 0 chr20 25914395 25914456 -46239426 + (CATA)n Simple_repeat Simple_repeat 3 64 0 221 200 30 180 chr20 25915702 25915802 -46238080 + MIR SINE MIR 144 228 -34 2365 110 0 0 chr20 25915847 25916157 -46237725 - AluY SINE Alu -1 310 1 61 27 0 0 chr20 25916200 25916275 -46237607 + AT_rich Low_complexity Low_complexity 1 75 0 205 333 15 0 chr20 25916609 25916675 -46237207 + L2 LINE L2 2992 3058 -214 564 237 62 77 chr20 25917090 25917284 -46236598 - MLT1H LTR MaLR -5 544 354 2210 143 0 0 chr20 25917424 25917732 -46236150 - AluSx SINE Alu -4 308 1 2163 104 7 7 chr20 25917833 25918130 -46235752 + AluSc SINE Alu 1 297 -12 2354 110 0 7 chr20 25919081 25919391 -46234491 + AluSq SINE Alu 1 308 -5 2263 125 3 0 chr20 25919400 25919712 -46234170 + AluSq SINE Alu 1 313 0 1949 148 0 0 chr20 25920083 25920360 -46233522 + AluSx SINE Alu 4 280 -32 222 62 0 0 chr20 25920362 25920394 -46233488 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 493 230 163 43 chr20 25921486 25921558 -46232324 + MIR SINE MIR 12 74 -188 2657 94 17 8 chr20 25921558 25921919 -46231963 - THE1B LTR MaLR 0 364 1 493 230 163 43 chr20 25921919 25922055 -46231827 + MIR SINE MIR 74 245 -17 843 248 232 50 chr20 25922659 25923134 -46230748 - MLT1G1 LTR MaLR -34 561 1 508 268 120 2 chr20 25923736 25924029 -46229853 + LTR16C LTR ERVL 107 487 -4 316 289 115 26 chr20 25924272 25924428 -46229454 + MIR SINE MIR 87 256 -6 2159 122 55 19 chr20 25924580 25924942 -46228940 + THE1C LTR MaLR 1 375 0 273 320 0 29 chr20 25925209 25925312 -46228570 - MLT1K LTR MaLR -346 242 143 948 224 161 70 chr20 25925650 25926192 -46227690 - LTR50 LTR ERVL -25 770 90 479 154 152 11 chr20 25926205 25926297 -46227585 - MER66A LTR ERV1 -9 542 388 715 185 104 116 chr20 25926411 25926755 -46227127 - MER41B LTR ERV1 -129 506 114 279 254 0 0 chr20 25926757 25926824 -46227058 - LTR50 LTR ERVL -727 68 2 204 279 16 0 chr20 25928392 25928453 -46225429 + GA-rich Low_complexity Low_complexity 2 63 0 1406 226 17 20 chr20 25929431 25929723 -46224159 + AluJo SINE Alu 1 291 -11 412 271 57 0 chr20 25929815 25929937 -46223945 - L2 LINE L2 0 3313 3185 2418 107 0 0 chr20 25930288 25930598 -46223284 - AluSq SINE Alu -3 310 1 1713 168 41 0 chr20 25930857 25931149 -46222733 + AluJo SINE Alu 9 312 0 207 0 0 0 chr20 25931936 25931959 -46221923 + (A)n Simple_repeat Simple_repeat 1 23 0 355 235 0 0 chr20 25932508 25932593 -46221289 - L1PB4 LINE L1 -3 6153 6069 3341 191 10 10 chr20 25932593 25933312 -46220570 + L1 LINE L1 4368 5086 -1060 823 147 7 15 chr20 25934083 25934219 -46219663 + AluJo SINE Alu 1 135 -177 567 281 4 62 chr20 25934358 25934600 -46219282 - L2 LINE L2 -5 3308 3081 246 32 0 0 chr20 25935055 25935086 -46218796 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 348 24 0 0 chr20 25935534 25935575 -46218307 + (TG)n Simple_repeat Simple_repeat 1 41 0 265 338 45 8 chr20 25936549 25936682 -46217200 + MIR SINE MIR 118 255 -7 2120 136 0 16 chr20 25936991 25937300 -46216582 + AluSx SINE Alu 1 304 -8 449 224 56 126 chr20 25937469 25937525 -46216357 - L2 LINE L2 -4 3309 3251 907 169 87 31 chr20 25937525 25937720 -46216162 + MER3 DNA MER1_type 1 206 -3 449 224 56 126 chr20 25937720 25937877 -46216005 - L2 LINE L2 -62 3251 3111 204 255 0 0 chr20 25938694 25938741 -46215141 + T-rich Low_complexity Low_complexity 1 47 0 21 0 0 0 chr20 25939525 25939546 -46214336 + AT_rich Low_complexity Low_complexity 1 21 0 207 0 0 0 chr20 25942702 25942725 -46211157 + (GA)n Simple_repeat Simple_repeat 1 23 0 484 265 127 0 chr20 25944706 25944895 -46208987 - MIR SINE MIR -9 253 41 2426 96 0 0 chr20 25945063 25945375 -46208507 + AluSq SINE Alu 1 312 -1 1888 208 87 21 chr20 25946265 25946737 -46207145 - MLT1D LTR MaLR -2 503 1 216 97 0 0 chr20 25946772 25946803 -46207079 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 190 308 217 23 chr20 25946823 25947044 -46206838 - L2 LINE L2 -45 3227 2964 1773 194 0 7 chr20 25947271 25947580 -46206302 - AluJo SINE Alu -5 307 1 1283 221 54 19 chr20 25947645 25947962 -46205920 + L1MC4 LINE L1 7259 7586 -456 * 2547 168 72 23 chr20 25947957 25948481 -46205401 - L1MB8 LINE L1 -205 5973 5424 364 73 55 0 chr20 25948478 25948533 -46205349 + L1MC4 LINE L1 7985 8042 0 * 233 321 136 22 chr20 25949036 25949220 -46204662 - L3 LINE CR1 -1138 439 235 930 289 73 47 chr20 25949432 25949691 -46204191 + L2 LINE L2 2414 2665 -648 2180 107 34 0 chr20 25949691 25949982 -46203900 - AluSg SINE Alu -9 301 1 930 289 73 47 chr20 25949982 25950330 -46203552 + L2 LINE L2 2665 3051 -262 2426 89 0 3 chr20 25950330 25950634 -46203248 - AluSx SINE Alu -9 303 1 930 289 73 47 chr20 25950634 25950904 -46202978 + L2 LINE L2 3051 3312 -1 319 264 25 25 chr20 25951047 25951168 -46202714 - LTR16C LTR ERVL 0 491 371 1948 358 60 2 chr20 25951722 25952641 -46201241 - ERVL LTR ERVL -708 5056 4085 254 297 11 0 chr20 25952704 25952795 -46201087 - ERVL LTR ERVL -1778 3986 3895 676 230 14 0 chr20 25952798 25952949 -46200933 - L1PB4 LINE L1 -58 6096 5945 1037 82 7 41 chr20 25953080 25953227 -46200655 - THE1C LTR MaLR 0 375 234 5011 192 29 14 chr20 25953229 25953965 -46199917 - L1PB4 LINE L1 -1004 5142 4383 351 44 0 0 chr20 25953965 25954010 -46199872 + (TG)n Simple_repeat Simple_repeat 2 46 0 5011 192 29 14 chr20 25954010 25954355 -46199527 - L1PB4 LINE L1 -1763 4383 4045 1090 262 114 22 chr20 25954359 25954764 -46199118 - ERVL LTR ERVL -3328 2326 1885 630 285 70 0 chr20 25955284 25955470 -46198412 - LTR16C LTR ERVL -1 490 292 372 189 14 0 chr20 25956803 25956877 -46197005 - MLT1K LTR MaLR -2 586 512 186 311 0 0 chr20 25957325 25957370 -46196512 + MIR3 SINE MIR 141 185 -23 263 28 28 0 chr20 25957781 25957817 -46196065 + (TTCA)n Simple_repeat Simple_repeat 2 38 0 288 290 156 37 chr20 25958320 25958638 -46195244 - MLT1J1 LTR MaLR -20 430 65 308 284 11 11 chr20 25959453 25959548 -46194334 - MER94 DNA DNA -35 99 5 6031 174 24 28 chr20 25959659 25960162 -46193720 + L1MC2 LINE L1 4574 5078 -1266 1973 141 10 7 chr20 25960162 25960453 -46193429 - AluJo SINE Alu -20 292 1 6031 174 24 28 chr20 25960453 25960809 -46193073 + L1MC2 LINE L1 5078 5434 -910 2360 80 0 0 chr20 25960809 25961096 -46192786 + AluY SINE Alu 1 287 -24 180 0 0 0 chr20 25961099 25961119 -46192763 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 6031 174 24 28 chr20 25961119 25962031 -46191851 + L1MC2 LINE L1 5436 6343 -1 24 67 0 0 chr20 25962191 25962236 -46191646 + AT_rich Low_complexity Low_complexity 1 45 0 279 259 205 0 chr20 25962323 25962435 -46191447 - MIR SINE MIR -44 218 84 599 170 36 79 chr20 25963097 25963148 -46190734 - LTR16C LTR ERVL 0 491 439 1593 216 52 3 chr20 25963148 25963496 -46190386 - MLT1A1 LTR MaLR 0 365 1 599 170 36 79 chr20 25963496 25963609 -46190273 - LTR16C LTR ERVL -52 439 334 419 217 52 0 chr20 25963776 25963891 -46189991 - LTR16C LTR ERVL -11 480 360 1767 251 86 48 chr20 25966318 25966440 -46187442 + L1ME3A LINE L1 5485 5601 -569 383 84 28 14 chr20 25966440 25966511 -46187371 - L1MA4A LINE L1 -5 6298 6227 1767 251 86 48 chr20 25966511 25966795 -46187087 + L1ME3A LINE L1 5601 5873 -297 2160 122 0 19 chr20 25966795 25967106 -46186776 + AluSp SINE Alu 1 305 -8 1767 251 86 48 chr20 25967106 25967351 -46186531 + L1ME3A LINE L1 5873 6162 -8 1370 150 18 0 chr20 25967425 25967651 -46186231 + L1PA16 LINE L1 5928 6157 -9 1807 63 0 5 chr20 25968284 25968507 -46185375 + AluY SINE Alu 77 298 -13 2281 103 3 0 chr20 25968521 25968812 -46185070 + AluSx SINE Alu 3 294 -18 664 273 5 16 chr20 25968988 25969182 -46184700 + MIR SINE MIR 65 256 -6 265 242 251 24 chr20 25969589 25969800 -46184082 + MLT1I LTR MaLR 66 324 -122 432 288 46 75 chr20 25972350 25972590 -46181292 - LTR16A1 LTR ERVL -4 453 221 2292 181 74 27 chr20 25972853 25972887 -46180995 + MLT1F LTR MaLR 4 35 -507 3195 91 18 7 chr20 25972887 25973326 -46180556 - MLT2A1 LTR ERVL 0 444 1 2292 181 74 27 chr20 25973326 25973806 -46180076 + MLT1F LTR MaLR 35 542 0 236 315 51 67 chr20 25974287 25974406 -46179476 + MLT1L LTR MaLR 220 337 -278 1657 115 21 80 chr20 25974406 25974745 -46179137 - L1MA2 LINE L1 0 6304 5986 236 315 51 67 chr20 25974745 25974803 -46179079 + MLT1L LTR MaLR 337 394 -221 458 225 124 52 chr20 25974957 25975164 -46178718 - MLT1H1 LTR MaLR -10 532 313 407 101 31 57 chr20 25975246 25975405 -46178477 + (TCTA)n Simple_repeat Simple_repeat 3 157 0 932 252 44 32 chr20 25975405 25975655 -46178227 - MLT1H1 LTR MaLR -302 253 1 525 277 55 32 chr20 25976029 25976339 -46177543 - LTR16C LTR ERVL 0 491 149 816 101 31 0 chr20 25976933 25977062 -46176820 - L1MB3 LINE L1 -3 6180 6048 1885 166 47 0 chr20 25977208 25977552 -46176330 - L1PB4 LINE L1 -4 6152 5793 195 204 0 0 chr20 25977642 25977686 -46176196 + (TATG)n Simple_repeat Simple_repeat 2 45 0 464 122 81 16 chr20 25977767 25978203 -46175679 + (TA)n Simple_repeat Simple_repeat 1 464 0 1033 209 156 73 chr20 25978289 25978686 -46175196 - MLT1H LTR MaLR 0 549 120 2372 93 3 3 chr20 25979166 25979478 -46174404 - AluSq SINE Alu -1 312 1 2179 136 18 12 chr20 25979923 25980261 -46173621 + MER47A DNA MER2_type 27 366 0 323 253 0 0 chr20 25980266 25980345 -46173537 + MER116 DNA Mariner 2 80 0 502 238 79 50 chr20 25980373 25980396 -46173486 - L1MC4a LINE L1 -1905 5903 5882 1849 161 7 3 chr20 25980396 25980695 -46173187 - AluJo SINE Alu -12 300 1 502 238 79 50 chr20 25980695 25980873 -46173009 - L1MC4a LINE L1 -1926 5882 5696 453 229 0 9 chr20 25981225 25981330 -46172552 + MIR SINE MIR 40 143 -119 2086 108 0 7 chr20 25981798 25982075 -46171807 - AluSx SINE Alu -11 301 27 2793 215 64 71 chr20 25982217 25982981 -46170901 - MER21B LTR ERV1 -57 806 48 365 238 0 12 chr20 25983027 25983107 -46170775 - MER21B LTR ERV1 -773 90 12 393 234 121 0 chr20 25983175 25983299 -46170583 - HAL1b LINE L1 -2 1346 1208 529 214 34 0 chr20 25983427 25983544 -46170338 + L2 LINE L2 3186 3306 -7 933 167 0 0 chr20 25983575 25983713 -46170169 + FRAM SINE Alu 14 151 -25 554 243 106 34 chr20 25983750 25984042 -46169840 - HAL1b LINE L1 -971 377 65 1426 247 94 35 chr20 25985864 25986261 -46167621 + MLT1G1 LTR MaLR 10 490 -105 1627 162 55 87 chr20 25986261 25986663 -46167219 - MLT1B LTR MaLR -1 389 1 1426 247 94 35 chr20 25986663 25986760 -46167122 + MLT1G1 LTR MaLR 490 580 -15 558 255 50 6 chr20 25987222 25987383 -46166499 + MIR SINE MIR 8 175 -87 334 301 0 0 chr20 25987540 25987633 -46166249 - L2 LINE L2 0 3313 3221 1067 245 24 27 chr20 25988326 25988624 -46165258 + LTR16C LTR ERVL 193 489 -2 270 73 0 0 chr20 25991651 25991692 -46162190 + (CA)n Simple_repeat Simple_repeat 1 41 0 585 0 0 0 chr20 25994256 25994321 -46159561 + (TA)n Simple_repeat Simple_repeat 2 66 0 36 19 0 19 chr20 25994753 25994783 -46159099 + AT_rich Low_complexity Low_complexity 1 31 -22 1548 167 4 16 chr20 25994783 25995041 -46158841 + AluJb SINE Alu 35 289 -23 36 19 0 19 chr20 25995041 25995064 -46158818 + AT_rich Low_complexity Low_complexity 31 53 0 360 211 142 83 chr20 25995327 25995545 -46158337 + MLT1H LTR MaLR 249 479 -70 219 88 0 0 chr20 25995835 25995869 -46158013 + (TG)n Simple_repeat Simple_repeat 2 35 0 295 217 43 0 chr20 25996263 25996332 -46157550 + MLT1K LTR MaLR 508 579 -9 931 97 20 3 chr20 25996929 25997092 -46156790 + L1MB3 LINE L1 5290 5451 -732 316 170 0 0 chr20 25997092 25997139 -46156743 + MER2 DNA MER2_type 299 345 0 1013 139 0 36 chr20 25997197 25997391 -46156491 - MER2 DNA MER2_type -112 233 47 1679 134 14 4 chr20 25997391 25997667 -46156215 + L1MB3 LINE L1 5905 6183 0 284 342 38 25 chr20 25997724 25997882 -46156000 + MIR SINE MIR 9 168 -94 300 271 0 47 chr20 25998583 25998690 -46155192 + MIR SINE MIR 107 208 -54 2669 22 0 29 chr20 25998814 25999129 -46154753 + AluY SINE Alu 1 306 -5 734 210 14 7 chr20 25999130 25999273 -46154609 - FRAM SINE Alu -32 144 1 2236 111 0 10 chr20 26000120 26000426 -46153456 + AluSx SINE Alu 1 303 -9 246 363 0 24 chr20 26002235 26002358 -46151524 - MIR SINE MIR -55 153 41 1129 282 95 38 chr20 26002743 26003601 -46150281 + L1MEc LINE L1 125 982 -5223 191 219 49 0 chr20 26003930 26003971 -46149911 + MIR SINE MIR 40 82 -180 1098 218 98 109 chr20 26003991 26004061 -46149821 - MLT1J2 LTR MaLR -14 436 367 5936 102 17 7 chr20 26004061 26005143 -46148739 + L1PB2 LINE L1 5059 6149 -2 1098 218 98 109 chr20 26005143 26005513 -46148369 - MLT1J2 LTR MaLR -83 367 1 543 242 27 59 chr20 26005513 26005699 -46148183 + MIR SINE MIR 81 260 -2 239 79 26 0 chr20 26006083 26006121 -46147761 + (CA)n Simple_repeat Simple_repeat 1 39 0 2127 118 0 44 chr20 26007369 26007690 -46146192 - AluJb SINE Alu -5 307 1 2452 87 3 0 chr20 26008161 26008471 -46145411 + AluSq SINE Alu 1 311 -2 338 295 36 36 chr20 26008885 26009024 -46144858 - MIR SINE MIR -32 230 92 834 231 17 0 chr20 26009594 26009767 -46144115 - MER5B DNA MER1_type -2 176 1 2550 61 0 0 chr20 26010002 26010299 -46143583 + AluY SINE Alu 1 297 -14 3585 59 0 0 chr20 26010308 26010731 -46143151 + L1PA6 LINE L1 5726 6148 -6 2059 137 0 36 chr20 26010749 26011141 -46142741 - Tigger3(Golem) DNA MER2_type -1 3028 2 422 277 87 78 chr20 26011715 26012009 -46141873 + MLT1H LTR MaLR 57 358 -191 1893 202 16 21 chr20 26012009 26012385 -46141497 + MLT1A2 LTR MaLR 1 374 0 422 277 87 78 chr20 26012385 26012563 -46141319 + MLT1H LTR MaLR 358 533 -16 379 279 58 0 chr20 26012598 26012702 -46141180 + L2 LINE L2 3200 3309 -4 1135 204 8 191 chr20 26012784 26013294 -46140588 - MLT2B1 LTR ERVL -2 518 137 1537 129 71 0 chr20 26013294 26013518 -46140364 + AluSx SINE Alu 53 292 -20 1135 204 8 191 chr20 26013518 26013620 -46140262 - MLT2B1 LTR ERVL -383 137 18 271 168 18 2 chr20 26014423 26014486 -46139396 - MLT2B1 LTR ERVL 0 464 410 500 90 26 0 chr20 26014488 26014566 -46139316 + (TAGA)n Simple_repeat Simple_repeat 3 82 0 198 0 0 0 chr20 26014587 26014609 -46139273 + (GA)n Simple_repeat Simple_repeat 1 22 0 1223 161 99 0 chr20 26014612 26014823 -46139059 - MLT2B1 LTR ERVL -61 459 228 1604 162 48 42 chr20 26015041 26015345 -46138537 + THE1C LTR MaLR 1 309 -66 2101 131 3 3 chr20 26015345 26015642 -46138240 - AluSx SINE Alu -15 297 1 1604 162 48 42 chr20 26015642 26015695 -46138187 + THE1C LTR MaLR 309 360 -15 617 320 29 20 chr20 26015826 26016070 -46137812 - MIR SINE MIR 0 262 17 1156 265 17 33 chr20 26016225 26016587 -46137295 - LTR16C LTR ERVL -11 480 125 306 125 0 0 chr20 26017241 26017289 -46136593 + (TG)n Simple_repeat Simple_repeat 2 49 0 288 0 0 0 chr20 26018084 26018116 -46135766 + (CA)n Simple_repeat Simple_repeat 1 32 0 561 196 69 94 chr20 26018191 26018582 -46135300 + MLT1G LTR MaLR 107 555 0 647 283 92 7 chr20 26018645 26018917 -46134965 + LTR16C LTR ERVL 1 295 -196 188 277 15 15 chr20 26019703 26019768 -46134114 - MIR SINE MIR -1 261 197 641 279 6 45 chr20 26020191 26020370 -46133512 - MIR SINE MIR -88 174 3 272 363 0 0 chr20 26020693 26020795 -46133087 - MIR SINE MIR 0 262 161 580 213 103 43 chr20 26021612 26021865 -46132017 + LTR16A1 LTR ERVL 62 329 -128 219 69 0 0 chr20 26022202 26022231 -46131651 + (CA)n Simple_repeat Simple_repeat 2 30 0 367 272 139 48 chr20 26022232 26022541 -46131341 - LTR16C LTR ERVL 0 491 155 196 256 0 0 chr20 26022887 26022926 -46130956 - MIR3 SINE MIR -41 167 129 289 128 39 93 chr20 26023129 26023214 -46130668 - L1ME3 LINE L1 -160 6004 5925 1872 211 16 0 chr20 26023423 26023806 -46130076 - L1M4 LINE L1 -1028 5118 4730 507 229 89 0 chr20 26023795 26023939 -46129943 - L1ME3 LINE L1 -439 5731 5573 * 749 267 108 52 chr20 26024659 26025124 -46128758 - LTR16C LTR ERVL 0 491 1 244 351 53 26 chr20 26026611 26026725 -46127157 - L2 LINE L2 -3 3269 3153 732 162 60 0 chr20 26026803 26026920 -46126962 + FLAM_C SINE Alu 8 131 -12 195 217 22 0 chr20 26027099 26027145 -46126737 + MIR SINE MIR 128 174 -88 5145 245 124 21 chr20 26027337 26029369 -46124513 + Charlie7 DNA MER1_type 34 2274 -338 743 239 72 56 chr20 26029391 26029805 -46124077 - L1MC5 LINE L1 -305 7656 7236 298 298 0 12 chr20 26030670 26030754 -46123128 - HAL1 LINE L1 -636 1871 1789 363 222 20 0 chr20 26030800 26030899 -46122983 + L1ME3A LINE L1 5789 5889 -281 1251 192 255 31 chr20 26030917 26031501 -46122381 - HAL1 LINE L1 -739 1768 1054 922 261 43 40 chr20 26031508 26031569 -46122313 - L1ME3A LINE L1 -5 6559 6500 1886 161 3 3 chr20 26031569 26031867 -46122015 - AluJb SINE Alu -14 298 1 922 261 43 40 chr20 26031867 26032181 -46121701 - L1ME3A LINE L1 -64 6500 6183 640 265 63 0 chr20 26032197 26032386 -46121496 - L1ME3A LINE L1 -351 6213 6013 2043 164 21 102 chr20 26032386 26032509 -46121373 - MER66B LTR ERV1 0 486 355 1677 147 110 65 chr20 26032509 26032938 -46120944 - LTR7 LTR ERV1 -2 448 1 2043 164 21 102 chr20 26032938 26033343 -46120539 - MER66B LTR ERV1 -131 355 1 675 246 19 94 chr20 26033343 26033447 -46120435 - L1ME3A LINE L1 -551 6013 5903 2233 107 7 13 chr20 26033447 26033757 -46120125 + AluSq SINE Alu 1 308 -5 675 246 19 94 chr20 26033757 26033960 -46119922 - L1ME3A LINE L1 -661 5903 5724 301 252 91 43 chr20 26034049 26034106 -46119776 - L1ME3A LINE L1 -1006 5534 5481 2153 101 13 7 chr20 26034106 26034404 -46119478 + AluSx SINE Alu 1 300 -12 301 252 91 43 chr20 26034404 26035342 -46118540 - L1ME3A LINE L1 -1059 5481 4412 1550 254 50 10 chr20 26035410 26035812 -46118070 - MER70B LTR ERVL -157 421 4 3284 241 68 62 chr20 26035826 26037460 -46116422 - L1ME3A LINE L1 -2171 4369 2726 1366 132 3 14 chr20 26037458 26037651 -46116231 - L1MC/D LINE L1 -541 5627 5437 * 322 24 71 0 chr20 26037651 26037688 -46116194 + L1PA10 LINE L1 6121 6165 -3 1366 132 3 14 chr20 26037688 26037709 -46116173 - L1MC/D LINE L1 -731 5437 5417 734 288 34 7 chr20 26037713 26038008 -46115874 - L1ME3A LINE L1 -3948 2773 2471 637 280 57 76 chr20 26038219 26038327 -46115555 + L1MEc LINE L1 1727 1836 -4560 1041 208 23 14 chr20 26038327 26038543 -46115339 + MER20 DNA MER1_type 2 219 0 637 280 57 76 chr20 26038543 26039170 -46114712 + L1MEc LINE L1 1836 2448 -3948 284 48 71 0 chr20 26039195 26039237 -46114645 - L1PA10 LINE L1 -3 6165 6121 * 1384 109 0 10 chr20 26039232 26039425 -46114457 + L1P4 LINE L1 5437 5627 -541 1374 248 73 45 chr20 26039423 26040025 -46113857 + L1MEc LINE L1 2401 3019 -3196 * 503 273 110 46 chr20 26040040 26040412 -46113470 - L1MEc LINE L1 -4606 1934 1541 613 332 48 29 chr20 26040468 26040784 -46113098 - HAL1 LINE L1 -1728 779 458 904 284 90 39 chr20 26040827 26041311 -46112571 - L1M4 LINE L1 -2107 4039 3505 2730 77 13 52 chr20 26041311 26041386 -46112496 - THE1C LTR MaLR -2 373 297 2128 88 14 7 chr20 26041386 26041682 -46112200 + AluSg SINE Alu 1 298 -12 2730 77 13 52 chr20 26041682 26041994 -46111888 - THE1C LTR MaLR -78 297 1 904 284 90 39 chr20 26041994 26042228 -46111654 - L1M4 LINE L1 -2641 3505 3284 469 296 98 50 chr20 26042252 26042743 -46111139 - L1M4 LINE L1 -2922 3224 2758 1640 185 0 46 chr20 26042743 26043067 -46110815 - AluJb SINE Alu -3 309 1 469 296 98 50 chr20 26043067 26043113 -46110769 - L1M4 LINE L1 -3388 2758 2716 276 120 0 0 chr20 26043113 26043163 -46110719 + (TCTCTG)n Simple_repeat Simple_repeat 2 51 0 469 296 98 50 chr20 26043163 26043592 -46110290 - L1M4 LINE L1 -3430 2716 2210 521 211 1 70 chr20 26043713 26043871 -46110011 - L1MC4a LINE L1 -303 5818 5682 2350 93 0 0 chr20 26043871 26044172 -46109710 - AluSg SINE Alu -9 301 1 521 211 1 70 chr20 26044172 26044192 -46109690 - L1MC4a LINE L1 -439 5682 5662 462 237 79 13 chr20 26044264 26044416 -46109466 - LTR16C LTR ERVL 0 491 330 193 316 36 58 chr20 26044779 26044863 -46109019 + MIR SINE MIR 26 108 -154 1742 112 0 0 chr20 26044863 26045141 -46108741 - AluSx SINE Alu 0 330 53 193 316 36 58 chr20 26045141 26045194 -46108688 + MIR SINE MIR 108 161 -101 207 0 0 0 chr20 26045265 26045288 -46108594 + (TTG)n Simple_repeat Simple_repeat 1 23 0 1654 159 4 18 chr20 26045292 26045568 -46108314 - AluJo SINE Alu -30 282 11 1755 147 7 47 chr20 26046065 26046364 -46107518 + AluJb SINE Alu 2 288 -24 1808 167 42 83 chr20 26047568 26047866 -46106016 - MLT1B LTR MaLR 0 390 112 2065 141 0 0 chr20 26047866 26048165 -46105717 - AluSx SINE Alu -13 299 1 1808 167 42 83 chr20 26048165 26048273 -46105609 - MLT1B LTR MaLR -278 112 1 544 245 50 40 chr20 26048380 26048580 -46105302 + Charlie5 DNA MER1_type 1 202 -2410 * 1232 172 42 11 chr20 26048579 26048841 -46105041 + Charlie5 DNA MER1_type 2355 2624 0 186 43 0 0 chr20 26049163 26049186 -46104696 + (T)n Simple_repeat Simple_repeat 1 23 0 1477 157 68 32 chr20 26049301 26049581 -46104301 + AluJo SINE Alu 10 299 -13 261 0 0 0 chr20 26050344 26050373 -46103509 + (TG)n Simple_repeat Simple_repeat 2 30 0 241 276 55 37 chr20 26050700 26050863 -46103019 + HAL1 LINE L1 2222 2387 -120 402 337 96 18 chr20 26051196 26051531 -46102351 + L2 LINE L2 2124 2484 -830 3043 240 43 46 chr20 26051650 26052349 -46101533 + L1MB3 LINE L1 4147 4846 -1316 2229 91 0 45 chr20 26052349 26052657 -46101225 - AluSp SINE Alu -19 294 1 3043 240 43 46 chr20 26052657 26052996 -46100886 + L1MB3 LINE L1 4846 5182 -980 691 221 15 0 chr20 26052996 26053127 -46100755 + FLAM_A SINE Alu 1 133 0 3043 240 43 46 chr20 26053127 26053396 -46100486 + L1MB3 LINE L1 5182 5450 -712 1643 135 4 8 chr20 26053404 26053664 -46100218 + L1MB3 LINE L1 5823 6081 -102 1218 216 67 52 chr20 26053664 26053821 -46100061 + MSTB2 LTR MaLR 64 217 -240 1815 176 3 0 chr20 26053821 26054127 -46099755 + AluJo SINE Alu 2 308 -4 1218 216 67 52 chr20 26054127 26054357 -46099525 + MSTB2 LTR MaLR 217 457 0 948 378 35 18 chr20 26054358 26055158 -46098724 + ERVL LTR ERVL 4531 5344 -420 258 327 10 19 chr20 26055406 26055510 -46098372 + LTR16A LTR ERVL 105 207 -243 1456 245 132 38 chr20 26055585 26055744 -46098138 - L2 LINE L2 -2 3311 3168 2133 114 10 10 chr20 26055744 26056050 -46097832 + AluSx SINE Alu 1 306 -6 1456 245 132 38 chr20 26056050 26056794 -46097088 - L2 LINE L2 -145 3168 2318 522 263 80 90 chr20 26056836 26057148 -46096734 + LTR16A1 LTR ERVL 147 455 -2 404 250 10 10 chr20 26057170 26057274 -46096608 - L2 LINE L2 -1042 2272 2169 1484 230 104 0 chr20 26057567 26057958 -46095924 + L1ME3A LINE L1 5719 6149 -21 2045 224 49 16 chr20 26057988 26058440 -46095442 - LTR40a LTR ERVL -52 467 1 542 109 0 68 chr20 26058600 26058873 -46095009 + (TA)n Simple_repeat Simple_repeat 1 254 0 589 83 0 89 chr20 26058895 26059210 -46094672 + (TA)n Simple_repeat Simple_repeat 1 286 0 308 102 0 34 chr20 26059238 26059297 -46094585 + (CAGAGA)n Simple_repeat Simple_repeat 2 58 0 316 260 79 8 chr20 26059435 26059562 -46094320 - L1MC/D LINE L1 -1976 5832 5697 426 302 34 36 chr20 26059642 26059872 -46094010 - L1MC/D LINE L1 -539 5582 5357 316 275 12 72 chr20 26059878 26060045 -46093837 - MIR SINE MIR -30 232 76 557 309 96 53 chr20 26060066 26060464 -46093418 + MLT1J LTR MaLR 12 426 -85 351 96 0 0 chr20 26063177 26063229 -46090653 + (TG)n Simple_repeat Simple_repeat 2 53 0 321 272 64 85 chr20 26064966 26065201 -46088681 - MIR SINE MIR -12 250 21 437 176 0 24 chr20 26066825 26066910 -46086972 + FRAM SINE Alu 75 157 -19 2031 128 3 3 chr20 26066914 26067219 -46086663 + AluSx SINE Alu 3 307 0 918 241 165 35 chr20 26067219 26067625 -46086257 + MLT1H LTR MaLR 91 549 0 769 258 112 8 chr20 26067856 26068272 -46085610 + LTR16C LTR ERVL 3 489 -2 761 224 172 50 chr20 26068329 26068672 -46085210 - MLT1J1 LTR MaLR -24 422 38 21 36 0 0 chr20 26074830 26074858 -46079024 + AT_rich Low_complexity Low_complexity 1 28 0 198 174 0 0 chr20 26076965 26077011 -46076871 + (CA)n Simple_repeat Simple_repeat 2 47 0 209 216 0 20 chr20 26080507 26080558 -46073324 - MIR SINE MIR -139 69 20 184 222 0 44 chr20 26080694 26080739 -46073143 + MIR SINE MIR 63 105 -103 971 246 36 24 chr20 26080743 26081151 -46072731 - LTR16C LTR ERVL 0 491 45 1046 235 118 54 chr20 26081155 26081608 -46072274 + MLT1G1 LTR MaLR 9 436 -131 1938 140 86 0 chr20 26081608 26081922 -46071960 + MLT2C1 LTR ERVL 1 341 -56 237 65 0 0 chr20 26081956 26081987 -46071895 + (CA)n Simple_repeat Simple_repeat 2 32 0 264 157 39 0 chr20 26081993 26082044 -46071838 + MLT2C1 LTR ERVL 464 516 -4 861 176 88 0 chr20 26083077 26083236 -46070646 - FAM SINE Alu -2 173 1 231 263 61 10 chr20 26083304 26083403 -46070479 + L1MCc LINE L1 51 154 -6269 1711 171 119 44 chr20 26083559 26084014 -46069868 - L1M4 LINE L1 -1392 4754 4266 1058 269 71 48 chr20 26084517 26084597 -46069285 + LTR16C LTR ERVL 89 166 -325 1524 196 70 50 chr20 26084597 26084893 -46068989 - MLT1A1 LTR MaLR 0 365 59 2432 109 0 0 chr20 26084893 26085205 -46068677 + AluSx SINE Alu 1 312 0 1524 196 70 50 chr20 26085205 26085266 -46068616 - MLT1A1 LTR MaLR -306 59 1 1058 269 71 48 chr20 26085266 26085579 -46068303 + LTR16C LTR ERVL 166 491 0 299 259 49 12 chr20 26085580 26085661 -46068221 - MIR SINE MIR -104 104 21 342 308 56 46 chr20 26086218 26086413 -46067469 + L1MC4a LINE L1 5729 5925 -1883 22 35 0 0 chr20 26086616 26086645 -46067237 + AT_rich Low_complexity Low_complexity 1 29 0 208 256 0 0 chr20 26087488 26087531 -46066351 + A-rich Low_complexity Low_complexity 3 45 0 199 277 193 0 chr20 26087743 26087826 -46066056 + MIR SINE MIR 95 193 -69 785 230 16 78 chr20 26087912 26088169 -46065713 - MLT1F LTR MaLR 0 542 302 412 154 44 22 chr20 26088174 26088253 -46065629 - MLT1F LTR MaLR -440 102 22 2403 125 34 16 chr20 26088253 26088363 -46065519 + MLT1B LTR MaLR 1 108 -282 2213 176 56 7 chr20 26088363 26088771 -46065111 - MSTA LTR MaLR 0 428 1 2403 125 34 16 chr20 26088771 26089043 -46064839 + MLT1B LTR MaLR 108 390 0 1506 161 64 0 chr20 26089107 26089387 -46064495 + L1MB7 LINE L1 5887 6184 0 420 324 7 0 chr20 26089753 26089901 -46063981 + MIR SINE MIR 3 151 -111 651 288 31 18 chr20 26090096 26090322 -46063560 - MIR SINE MIR -14 248 20 606 256 0 0 chr20 26090706 26090862 -46063020 - MIR SINE MIR -34 228 73 1984 131 16 3 chr20 26091694 26092000 -46061882 - AluSx SINE Alu -2 310 1 1115 132 7 0 chr20 26092128 26092280 -46061602 + FRAM SINE Alu 1 150 -26 21 0 0 0 chr20 26092282 26092303 -46061579 + AT_rich Low_complexity Low_complexity 1 21 0 1191 116 5 183 chr20 26092347 26092387 -46061495 - MLT2D LTR ERVL 0 414 369 213 39 0 0 chr20 26092387 26092413 -46061469 + (CA)n Simple_repeat Simple_repeat 2 27 0 1191 116 5 183 chr20 26092413 26092438 -46061444 - MLT2D LTR ERVL -45 369 341 1257 61 0 0 chr20 26092438 26092618 -46061264 + (TA)n Simple_repeat Simple_repeat 1 180 0 1191 116 5 183 chr20 26092618 26092895 -46060987 - MLT2D LTR ERVL -73 341 1 1280 124 158 101 chr20 26092927 26093282 -46060600 - THE1C LTR MaLR 0 375 1 683 164 30 85 chr20 26093397 26093478 -46060404 - MER3 DNA MER1_type 0 209 140 2168 131 0 3 chr20 26093478 26093783 -46060099 + AluSx SINE Alu 1 304 -8 683 164 30 85 chr20 26093783 26093866 -46060016 - MER3 DNA MER1_type -69 140 54 2679 179 11 2 chr20 26093913 26094376 -46059506 + MLT1C LTR MaLR 1 467 0 2418 88 3 0 chr20 26094462 26094758 -46059124 + AluSp SINE Alu 1 297 -16 1295 181 69 72 chr20 26094762 26095082 -46058800 + MER21A LTR ERV1 260 578 -353 234 163 0 0 chr20 26095184 26095227 -46058655 + MER116 DNA Mariner 38 80 0 324 266 88 9 chr20 26095334 26095447 -46058435 + MIR3 SINE MIR 78 199 -9 867 270 47 92 chr20 26096109 26096554 -46057328 + MER115 DNA AcHobo 1 425 -268 784 216 28 6 chr20 26096587 26096763 -46057119 + MER115 DNA AcHobo 511 690 -3 2187 104 0 58 chr20 26096921 26097247 -46056635 + AluSx SINE Alu 1 307 -5 334 269 172 11 chr20 26097361 26097547 -46056335 - MIR SINE MIR -24 238 23 243 242 13 70 chr20 26097988 26098145 -46055737 + (CCCCG)n Simple_repeat Simple_repeat 2 149 0 375 232 141 0 chr20 26099894 26099993 -46053889 + MIR3 SINE MIR 45 157 -51 195 42 0 0 chr20 26100152 26100176 -46053706 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 2149 102 0 0 chr20 26100182 26100457 -46053425 - AluSx SINE Alu -37 275 1 257 340 103 0 chr20 26101274 26101468 -46052414 + L3b LINE CR1 1102 1315 -268 2147 131 10 0 chr20 26101597 26101888 -46051994 + AluSx SINE Alu 1 294 -18 1281 259 87 64 chr20 26101910 26102486 -46051396 - L1MC4 LINE L1 -6 8036 7448 532 243 30 24 chr20 26103744 26103913 -46049969 + L2 LINE L2 3139 3308 -5 2035 132 3 28 chr20 26104406 26104725 -46049157 - AluSx SINE Alu -1 311 1 23 33 0 0 chr20 26105133 26105163 -46048719 + AT_rich Low_complexity Low_complexity 1 30 0 304 324 150 0 chr20 26106472 26106645 -46047237 + MIR SINE MIR 29 227 -35 251 262 16 162 chr20 26106691 26106805 -46047077 + L2 LINE L2 2915 2992 -280 2233 128 0 0 chr20 26106805 26107111 -46046771 - AluSx SINE Alu -6 306 1 251 262 16 162 chr20 26107111 26107187 -46046695 + L2 LINE L2 2992 3077 -195 23 0 0 0 chr20 26107987 26108010 -46045872 + AT_rich Low_complexity Low_complexity 1 23 0 21 71 0 0 chr20 26108072 26108114 -46045768 + AT_rich Low_complexity Low_complexity 1 42 0 768 200 0 0 chr20 26108744 26108864 -46045018 - FLAM_A SINE Alu -10 132 13 274 175 123 0 chr20 26108879 26108936 -46044946 - AluSg/x SINE Alu -121 181 118 182 268 36 0 chr20 26109146 26109202 -46044680 + L2 LINE L2 3215 3272 0 698 271 91 84 chr20 26109656 26109934 -46043948 - L1MC4 LINE L1 -1 8041 7766 1631 182 21 4 chr20 26109934 26110214 -46043668 - AluJo SINE Alu -25 287 3 698 271 91 84 chr20 26110214 26110522 -46043360 - L1MC4 LINE L1 -276 7766 7331 877 171 28 34 chr20 26110524 26110700 -46043182 + MER3 DNA MER1_type 2 129 -80 1722 250 35 70 chr20 26110702 26111095 -46042787 - L1MC4 LINE L1 -592 7450 7092 832 131 0 25 chr20 26111095 26111217 -46042665 - 5S rRNA rRNA 0 121 3 1722 250 35 70 chr20 26111217 26111542 -46042340 - L1MC4 LINE L1 -950 7092 6757 1525 160 0 91 chr20 26112843 26113161 -46040721 + AluJo SINE Alu 3 291 -21 21 36 0 0 chr20 26113161 26113189 -46040693 + AT_rich Low_complexity Low_complexity 1 28 0 580 257 109 6 chr20 26113340 26113523 -46040359 - LTR16C LTR ERVL 0 491 290 234 0 0 0 chr20 26113943 26113969 -46039913 + (CA)n Simple_repeat Simple_repeat 2 27 0 240 100 0 0 chr20 26113969 26114009 -46039873 + (TC)n Simple_repeat Simple_repeat 1 40 0 210 312 28 9 chr20 26114032 26114141 -46039741 + CT-rich Low_complexity Low_complexity 5 115 0 189 178 0 0 chr20 26114224 26114269 -46039613 + (CA)n Simple_repeat Simple_repeat 1 45 0 270 319 216 0 chr20 26114428 26114544 -46039338 + L2 LINE L2 3116 3256 -16 1137 164 10 10 chr20 26114740 26114962 -46038920 + AluJb SINE Alu 88 309 0 197 326 32 0 chr20 26115343 26115438 -46038444 + MIR3 SINE MIR 110 207 -1 216 158 0 0 chr20 26117410 26117448 -46036434 + (TA)n Simple_repeat Simple_repeat 1 38 0 21 0 0 0 chr20 26118965 26118986 -46034896 + AT_rich Low_complexity Low_complexity 1 21 0 306 0 0 0 chr20 26120106 26120140 -46033742 + (TG)n Simple_repeat Simple_repeat 1 34 0 21 36 0 0 chr20 26120720 26120748 -46033134 + AT_rich Low_complexity Low_complexity 1 28 0 808 291 86 0 chr20 26121116 26121350 -46032532 - MIR SINE MIR 0 262 9 936 259 23 8 chr20 26122002 26122264 -46031618 - LTR16C LTR ERVL 0 491 226 473 244 30 67 chr20 26123159 26123323 -46030559 - MIR SINE MIR -37 225 68 251 346 23 15 chr20 26123936 26124066 -46029816 + L1P4 LINE L1 5617 5747 -419 24 53 0 0 chr20 26124414 26124452 -46029430 + AT_rich Low_complexity Low_complexity 1 38 0 230 263 259 6 chr20 26125170 26125278 -46028604 + MIR SINE MIR 34 156 -85 1834 158 60 25 chr20 26125735 26126103 -46027779 - MLT1B LTR MaLR 0 390 10 22 35 0 0 chr20 26126123 26126152 -46027730 + AT_rich Low_complexity Low_complexity 1 29 0 3435 152 18 41 chr20 26127198 26127863 -46026019 + L1MB7 LINE L1 5534 6183 -1 482 297 56 30 chr20 26127939 26128205 -46025677 - L1ME LINE L1 -359 5762 5490 1286 173 4 24 chr20 26128215 26128470 -46025412 - L1MD3 LINE L1 0 7995 7746 26 30 0 0 chr20 26128472 26128505 -46025377 + AT_rich Low_complexity Low_complexity 1 33 0 1204 130 62 19 chr20 26128542 26128750 -46025132 + Tigger3(Golem) DNA MER2_type 62 278 -2751 1024 198 5 109 chr20 26128754 26129122 -46024760 + L1MC4 LINE L1 7711 8040 -2 791 172 31 0 chr20 26129122 26129250 -46024632 + FLAM_A SINE Alu 1 132 -1 829 245 10 0 chr20 26130503 26130703 -46023179 + L1MC/D LINE L1 5615 5816 -1992 1075 156 7 0 chr20 26130947 26131101 -46022781 - FRAM SINE Alu -11 155 1 1313 162 34 49 chr20 26131142 26131431 -46022451 - AluSq SINE Alu 0 313 29 2701 172 36 62 chr20 26131524 26132170 -46021712 - L1MB7 LINE L1 -74 6110 5482 2191 176 19 27 chr20 26132170 26132580 -46021302 - MER54A LTR ERVL 0 901 495 1171 171 27 2 chr20 26132780 26132806 -46021076 - L1MB7 LINE L1 -710 5468 5444 1942 192 31 17 chr20 26132806 26133166 -46020716 + MLT1A1 LTR MaLR 1 365 0 1171 171 27 2 chr20 26133166 26133461 -46020421 - L1MB7 LINE L1 -734 5444 5167 2107 106 42 0 chr20 26133493 26133776 -46020106 - AluSq SINE Alu -18 295 1 287 130 19 0 chr20 26135454 26135508 -46018374 + CT-rich Low_complexity Low_complexity 2 56 0 229 279 0 58 chr20 26136070 26136156 -46017726 - MIR3 SINE MIR -21 187 107 1126 176 88 0 chr20 26137739 26137978 -46015904 + MLT1E1 LTR MaLR 1 260 -394 723 186 32 0 chr20 26137982 26138106 -46015776 - AluSq SINE Alu -52 261 134 1390 104 0 0 chr20 26138106 26138289 -46015593 - AluSp SINE Alu -9 304 122 334 147 0 0 chr20 26138765 26138833 -46015049 - AluSp SINE Alu -167 136 69 1336 158 0 0 chr20 26138833 26139036 -46014846 - AluSx SINE Alu -109 203 1 1822 199 84 3 chr20 26139037 26139383 -46014499 + MLT1E1 LTR MaLR 281 654 0 2098 122 27 0 chr20 26139703 26139997 -46013885 - AluSq SINE Alu -11 302 1 259 157 0 20 chr20 26140015 26140066 -46013816 - L1MC2 LINE L1 -253 6091 6042 3791 31 2 0 chr20 26140066 26140491 -46013391 - L1PA4 LINE L1 -2 6153 5728 8309 25 7 0 chr20 26140506 26141826 -46012056 + L1PA4 LINE L1 4421 5745 -410 4119 145 36 54 chr20 26141826 26142291 -46011591 - L1MC2 LINE L1 -292 6052 5614 3496 90 2 62 chr20 26142291 26142535 -46011347 - L1MA2 LINE L1 0 6304 6108 2562 54 0 0 chr20 26142535 26142831 -46011051 - AluY SINE Alu -15 296 1 3496 90 2 62 chr20 26142831 26143121 -46010761 - L1MA2 LINE L1 -196 6108 5802 4119 145 36 54 chr20 26143121 26143576 -46010306 - L1MC2 LINE L1 -730 5614 5152 1885 154 3 3 chr20 26143590 26143888 -46009994 - AluJb SINE Alu -14 298 1 1827 266 7 14 chr20 26143892 26144317 -46009565 + MLT1H1 LTR MaLR 132 553 -2 244 275 65 72 chr20 26144325 26144466 -46009416 - L2 LINE L2 -3 3269 3129 1802 146 31 11 chr20 26144466 26144753 -46009129 + AluJb SINE Alu 1 293 -19 244 275 65 72 chr20 26144753 26144897 -46008985 - L2 LINE L2 -143 3129 2985 2293 257 125 18 chr20 26145005 26145439 -46008443 - L2 LINE L2 -303 3010 2624 2365 110 0 0 chr20 26145439 26145747 -46008135 + AluSx SINE Alu 1 308 -4 2293 257 125 18 chr20 26145747 26146227 -46007655 - L2 LINE L2 -689 2624 1997 318 283 131 0 chr20 26146229 26146328 -46007554 - MIR SINE MIR -140 122 11 498 178 204 32 chr20 26146341 26146498 -46007384 - MIR SINE MIR 0 262 79 2778 137 29 80 chr20 26147683 26147871 -46006011 + L1MCb LINE L1 565 761 -5350 1838 152 0 20 chr20 26147871 26148167 -46005715 + AluSx SINE Alu 1 290 -22 2042 138 0 0 chr20 26148171 26148454 -46005428 + AluSx SINE Alu 1 283 -29 231 36 0 0 chr20 26148454 26148482 -46005400 + (CAAT)n Simple_repeat Simple_repeat 2 29 0 2778 137 29 80 chr20 26148482 26149012 -46004870 + L1MCb LINE L1 762 1259 -4852 13641 175 34 17 chr20 26149013 26152333 -46001549 - L1MB1 LINE L1 -274 5894 2509 1242 195 93 30 chr20 26152880 26153182 -46000700 + MLT1G LTR MaLR 270 590 0 2095 132 0 0 chr20 26153606 26153902 -45999980 - AluSx SINE Alu -16 296 1 530 277 19 34 chr20 26153967 26154173 -45999709 - MLT1L LTR MaLR -8 607 405 1080 181 29 19 chr20 26154204 26154414 -45999468 + MLT1A2 LTR MaLR 1 212 -162 426 235 92 10 chr20 26154527 26154625 -45999257 - MLT1L LTR MaLR -365 250 145 2090 128 0 13 chr20 26154657 26154963 -45998919 + AluSx SINE Alu 1 302 -10 275 300 36 36 chr20 26155086 26155226 -45998656 - MLT1L LTR MaLR -458 157 18 241 208 0 0 chr20 26155362 26155410 -45998472 + L1ME4a LINE L1 6074 6121 0 702 137 8 23 chr20 26155427 26155558 -45998324 + L1MB8 LINE L1 6050 6178 0 2292 89 3 10 chr20 26156290 26156593 -45997289 - AluSq SINE Alu -12 301 1 1665 182 11 7 chr20 26156916 26157202 -45996680 + AluJo SINE Alu 12 298 -14 228 111 0 0 chr20 26157206 26157242 -45996640 + (TG)n Simple_repeat Simple_repeat 1 36 0 2269 109 0 3 chr20 26157551 26157854 -45996028 - AluSx SINE Alu -10 302 1 1133 142 0 0 chr20 26157858 26158020 -45995862 - AluJb SINE Alu -15 297 136 924 196 91 18 chr20 26159117 26159336 -45994546 + MER46A DNA MER2_type 1 235 -1 3296 177 45 11 chr20 26160081 26160726 -45993156 + MER39 LTR ERV1 2 707 0 2250 68 0 31 chr20 26160820 26161151 -45992731 - AluY SINE Alu 0 322 1 845 145 0 0 chr20 26161153 26161277 -45992605 - FLAM_C SINE Alu -9 134 11 197 319 101 0 chr20 26163302 26163371 -45990511 - L2 LINE L2 -1 3271 3196 198 0 0 0 chr20 26164423 26164445 -45989437 + (T)n Simple_repeat Simple_repeat 1 22 0 746 183 0 0 chr20 26164461 26164592 -45989290 - FLAM_A SINE Alu -2 131 1 1234 249 107 53 chr20 26164740 26165302 -45988580 - LTR29 LTR ERV1 -28 594 3 5007 34 0 0 chr20 26165600 26166159 -45987723 + L1PA4 LINE L1 5594 6152 -3 918 117 0 58 chr20 26166852 26166989 -45986893 + FLAM_C SINE Alu 2 130 -3 489 190 116 0 chr20 26167456 26167577 -45986305 + MER97b DNA MER1_type? 42 176 -877 558 248 15 79 chr20 26167754 26167956 -45985926 + Charlie8 DNA MER1_type 3 191 -2226 2345 71 0 0 chr20 26170199 26170504 -45983378 - AluY SINE Alu 0 305 1 1949 144 3 7 chr20 26171964 26172262 -45981620 - AluSx SINE Alu -15 297 1 3265 127 73 30 chr20 26172410 26172915 -45980967 - MER1A DNA MER1_type 0 527 1 1919 136 14 10 chr20 26173044 26173339 -45980543 + AluJb SINE Alu 5 300 -12 261 215 105 76 chr20 26174792 26174964 -45978918 - L1MC4 LINE L1 -1 8041 7865 2006 212 97 112 chr20 26175007 26175925 -45977957 - L1MC5 LINE L1 -89 7872 6973 2085 144 37 64 chr20 26175925 26176248 -45977634 - L1MB2 LINE L1 0 6171 5862 2572 7 0 0 chr20 26176248 26176524 -45977358 - AluYa5 SINE Alu -2 309 34 2085 144 37 64 chr20 26176524 26176637 -45977245 - L1MB2 LINE L1 -309 5862 5747 2006 212 97 112 chr20 26176637 26176884 -45976998 - L1MC5 LINE L1 -988 6973 6724 257 258 15 0 chr20 26177073 26177139 -45976743 + MER5B DNA MER1_type 1 67 -111 764 167 0 0 chr20 26177140 26177254 -45976628 + AluJb SINE Alu 3 116 -196 22 35 0 0 chr20 26177269 26177298 -45976584 + AT_rich Low_complexity Low_complexity 1 29 0 457 274 16 0 chr20 26177306 26177430 -45976452 + MER5B DNA MER1_type 47 172 -6 29 0 0 0 chr20 26177788 26177817 -45976065 + AT_rich Low_complexity Low_complexity 1 29 0 2186 92 35 0 chr20 26177822 26178104 -45975778 + AluSc SINE Alu 1 292 -17 187 283 101 101 chr20 26178620 26178867 -45975015 - L2 LINE L2 -354 2960 2714 411 314 39 0 chr20 26179568 26179724 -45974158 + CT-rich Low_complexity Low_complexity 6 167 0 2022 116 0 35 chr20 26179845 26180156 -45973726 - AluSx SINE Alu -12 300 1 2496 54 3 0 chr20 26180563 26180857 -45973025 + AluY SINE Alu 1 295 -16 659 298 76 48 chr20 26182097 26182206 -45971676 - L1ME4a LINE L1 -59 6062 5957 1815 124 0 0 chr20 26182206 26182448 -45971434 + AluSx SINE Alu 40 281 -31 659 298 76 48 chr20 26182448 26183195 -45970687 - L1ME4a LINE L1 -164 5957 5177 2121 112 0 0 chr20 26183953 26184238 -45969644 + AluSx SINE Alu 6 290 -22 1835 147 103 26 chr20 26184442 26184782 -45969100 + MER47A DNA MER2_type 1 366 0 201 308 0 19 chr20 26185842 26185894 -45967988 + MIR SINE MIR 20 70 -138 203 261 252 17 chr20 26189776 26189895 -45963987 + MIR SINE MIR 99 245 -17 228 196 252 37 chr20 26191212 26191319 -45962563 + L3 LINE CR1 1147 1276 -301 1920 151 0 20 chr20 26191455 26191759 -45962123 - AluJb SINE Alu -14 298 1 222 229 34 17 chr20 26192195 26192313 -45961569 + (TA)n Simple_repeat Simple_repeat 1 120 0 27 29 0 0 chr20 26192319 26192353 -45961529 + AT_rich Low_complexity Low_complexity 1 34 0 334 347 123 18 chr20 26192418 26192599 -45961283 - MIR SINE MIR -63 145 3 1754 143 14 0 chr20 26192602 26192921 -45960961 - AluSx SINE Alu 0 323 1 310 193 105 0 chr20 26193428 26193485 -45960397 + L2 LINE L2 3250 3312 -1 439 285 20 6 chr20 26194413 26194563 -45959319 + MER5B DNA MER1_type 28 184 -5 1196 178 51 88 chr20 26194688 26195086 -45958796 - MLT1B LTR MaLR 0 390 8 2289 103 0 26 chr20 26195807 26196119 -45957763 - AluSx SINE Alu -8 304 1 1961 107 54 3 chr20 26196122 26196420 -45957462 - AluSp SINE Alu 0 313 1 261 376 78 0 chr20 26198070 26198211 -45955671 - L3b LINE CR1 -156 1427 1276 510 237 5 108 chr20 26198274 26198468 -45955414 + MER102a DNA MER1_type 142 315 -15 300 209 284 22 chr20 26199900 26200034 -45953848 + MER112 DNA MER1_type 57 225 -35 24 32 0 0 chr20 26200090 26200121 -45953761 + AT_rich Low_complexity Low_complexity 1 31 0 1926 140 11 4 chr20 26201695 26202015 -45951867 - AluJb SINE Alu 0 324 3 1691 193 24 0 chr20 26202336 26202626 -45951256 + AluJo SINE Alu 3 299 -13 231 325 108 8 chr20 26202981 26203101 -45950781 - MIR3 SINE MIR -8 200 69 2084 113 31 0 chr20 26203192 26203485 -45950397 + AluSx SINE Alu 1 302 -10 189 0 0 0 chr20 26206915 26206936 -45946946 + (A)n Simple_repeat Simple_repeat 1 21 0 2086 122 7 16 chr20 26208854 26209157 -45944725 + AluSx SINE Alu 1 300 -12 2250 125 0 0 chr20 26209161 26209464 -45944418 + AluSx SINE Alu 1 303 -9 206 274 16 32 chr20 26209766 26209828 -45944054 + L2 LINE L2 2959 3019 -253 1897 146 7 3 chr20 26209973 26210269 -45943613 - AluJb SINE Alu -22 290 2 22 0 0 0 chr20 26210360 26210382 -45943500 + AT_rich Low_complexity Low_complexity 1 22 0 300 138 0 0 chr20 26210494 26210559 -45943323 + (TG)n Simple_repeat Simple_repeat 1 65 0 296 333 9 0 chr20 26210845 26210953 -45942929 + L2 LINE L2 3123 3231 -41 329 256 13 0 chr20 26211287 26211365 -45942517 - MIR SINE MIR -109 153 75 230 263 84 21 chr20 26211553 26211648 -45942234 + MIR3 SINE MIR 65 165 -43 22 35 0 0 chr20 26212242 26212271 -45941611 + AT_rich Low_complexity Low_complexity 1 29 0 2134 102 32 0 chr20 26212274 26212557 -45941325 - AluSx SINE Alu -20 292 1 1715 194 25 0 chr20 26212812 26213127 -45940755 + MER58B DNA MER1_type 19 341 0 235 297 102 34 chr20 26214178 26214296 -45939586 - L2 LINE L2 -5 3267 3142 479 318 24 35 chr20 26214423 26214678 -45939204 - L2 LINE L2 -512 2802 2551 329 296 10 0 chr20 26217060 26217158 -45936724 + L2 LINE L2 2924 3022 -250 423 330 48 5 chr20 26217480 26217686 -45936196 + MIR SINE MIR 14 228 -34 1150 236 75 25 chr20 26217823 26218183 -45935699 + LTR16C LTR ERVL 85 462 -29 4115 160 83 94 chr20 26218924 26219046 -45934836 + L1MB8 LINE L1 4585 4707 -1471 2161 89 0 0 chr20 26219046 26219316 -45934566 + AluSx SINE Alu 39 308 -4 4115 160 83 94 chr20 26219316 26219689 -45934193 + L1MB8 LINE L1 4707 5083 -1095 2028 119 0 0 chr20 26219689 26219950 -45933932 + AluSq SINE Alu 1 261 -52 623 158 0 0 chr20 26219950 26220045 -45933837 + AluSp/q SINE Alu 202 296 -17 4115 160 83 94 chr20 26220045 26220146 -45933736 + L1MB8 LINE L1 5082 5183 -995 2159 115 10 3 chr20 26220146 26220441 -45933441 + AluSx SINE Alu 1 297 -15 4115 160 83 94 chr20 26220441 26221336 -45932546 + L1MB8 LINE L1 5183 6164 -14 181 73 24 24 chr20 26222073 26222114 -45931768 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 553 255 77 20 chr20 26222534 26222730 -45931152 + MLT1I LTR MaLR 85 291 -118 2141 99 41 0 chr20 26222831 26223123 -45930759 - AluSx SINE Alu -8 304 1 352 142 0 151 chr20 26223584 26223690 -45930192 + MLT1F1 LTR MaLR 49 138 -429 2367 182 65 17 chr20 26223690 26224236 -45929646 + L1MD3 LINE L1 6136 6334 -10 403 258 153 11 chr20 26224475 26224665 -45929217 - MER113 DNA MER1_type? -137 384 168 800 217 22 5 chr20 26224665 26224849 -45929033 + AluJb SINE Alu 120 306 -6 264 208 52 10 chr20 26224852 26224948 -45928934 - MER113 DNA MER1_type? -361 160 61 195 42 0 0 chr20 26225346 26225370 -45928512 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 9054 20 0 1 chr20 26225373 26227162 -45926720 - L1PA7 LINE L1 -13 6141 4351 4029 18 2 0 chr20 26227162 26227616 -45926266 + L1PA7 LINE L1 3895 4349 -1797 1237 49 0 0 chr20 26227645 26227788 -45926094 + AluSg/x SINE Alu 160 302 -10 825 329 63 2 chr20 26227798 26228369 -45925513 + L1M4 LINE L1 4563 5168 -978 1552 179 19 0 chr20 26228370 26228632 -45925250 + AluJb SINE Alu 1 267 -45 647 198 6 22 chr20 26228635 26228817 -45925065 + GA-rich Low_complexity Low_complexity 2 180 0 285 271 37 28 chr20 26228828 26228935 -45924947 + L1M4 LINE L1 5170 5277 -869 2421 80 7 0 chr20 26228947 26229246 -45924636 + AluY SINE Alu 1 301 -10 1065 169 91 85 chr20 26229573 26229796 -45924086 + MER33 DNA MER1_type 4 231 -2354 2365 104 7 0 chr20 26229796 26230105 -45923777 - AluSp SINE Alu -2 311 1 1065 169 91 85 chr20 26230105 26230200 -45923682 + MER33 DNA MER1_type 231 324 0 1500 189 0 54 chr20 26230589 26230921 -45922961 + AluJb SINE Alu 1 316 0 354 204 282 0 chr20 26231545 26231648 -45922234 + HsTC2 DNA Tc2 1 132 -1766 * 834 246 37 25 chr20 26231644 26231888 -45921994 + HsTC2 DNA Tc2 1292 1714 -184 5210 135 20 29 chr20 26231903 26232119 -45921763 - L1MB3 LINE L1 -1 6182 5966 2178 123 0 22 chr20 26232119 26232435 -45921447 - AluSx SINE Alu -3 309 1 5210 135 20 29 chr20 26232435 26232939 -45920943 - L1MB3 LINE L1 -217 5966 5469 2472 115 22 0 chr20 26232939 26233295 -45920587 - THE1B LTR MaLR 0 364 1 5210 135 20 29 chr20 26233295 26233470 -45920412 - L1MB3 LINE L1 -714 5469 5294 589 208 22 77 chr20 26233483 26233635 -45920247 + HsTC2 DNA Tc2 1720 1863 -35 2137 130 0 0 chr20 26233635 26233968 -45919914 - AluSx SINE Alu 0 333 1 589 208 22 77 chr20 26233968 26233997 -45919885 + HsTC2 DNA Tc2 1863 1892 -6 25 0 0 0 chr20 26234047 26234072 -45919810 + AT_rich Low_complexity Low_complexity 1 25 0 23 33 0 0 chr20 26234104 26234134 -45919748 + AT_rich Low_complexity Low_complexity 1 30 0 2262 115 20 0 chr20 26234442 26234782 -45919100 - AluSx SINE Alu 0 346 1 466 222 34 17 chr20 26234948 26235065 -45918817 - LTR67 LTR ERVL -7 550 432 275 311 11 11 chr20 26235262 26235352 -45918530 - LTR67 LTR ERVL -355 202 113 1512 170 119 0 chr20 26235510 26235787 -45918095 + AluJb SINE Alu 1 310 -2 548 153 8 23 chr20 26235791 26235922 -45917960 + GA-rich Low_complexity Low_complexity 3 131 0 496 104 39 0 chr20 26236298 26236375 -45917507 - MADE1 DNA Mariner 0 80 1 410 208 109 3 chr20 26236547 26236655 -45917227 - L1ME2 LINE L1 -4 6330 6052 305 264 11 0 chr20 26236690 26236781 -45917101 + LTR30 LTR ERV1 552 643 -79 833 239 95 8 chr20 26236993 26237234 -45916648 - MLT1H1 LTR MaLR -298 257 32 428 196 106 2 chr20 26237511 26237619 -45916263 + L1ME2 LINE L1 6052 6330 -4 283 256 24 49 chr20 26239267 26239349 -45914533 - LTR67 LTR ERVL -364 193 114 230 97 0 0 chr20 26239324 26239355 -45914527 - MLT1J LTR MaLR -377 134 104 * 274 283 43 58 chr20 26241063 26241201 -45912681 - L2 LINE L2 0 3272 3137 384 237 138 101 chr20 26241212 26241646 -45912236 - MLT1J2 LTR MaLR 0 450 1 29 60 0 0 chr20 26242376 26242426 -45911456 + AT_rich Low_complexity Low_complexity 1 50 0 2439 146 30 0 chr20 26242426 26243537 -45910345 - L1PA15 LINE L1 -53 6112 4883 485 235 143 43 chr20 26243805 26244209 -45909673 + MLT1G LTR MaLR 68 594 -1 1787 177 3 0 chr20 26244585 26244867 -45909015 + AluJb SINE Alu 1 283 -29 793 211 32 11 chr20 26247022 26247207 -45906675 - MER5A DNA MER1_type 0 189 1 2586 55 0 13 chr20 26247489 26247799 -45906083 + AluY SINE Alu 1 306 -5 1826 138 71 0 chr20 26247805 26248088 -45905794 + AluSx SINE Alu 1 303 -9 2133 134 0 25 chr20 26248396 26248716 -45905166 + AluSx SINE Alu 1 312 0 1091 189 21 75 chr20 26248899 26249099 -45904783 + L1MC4 LINE L1 6814 6996 -1046 1871 122 26 45 chr20 26249099 26249410 -45904472 + AluJo SINE Alu 1 305 -7 1091 189 21 75 chr20 26249410 26249489 -45904393 + L1MC4 LINE L1 6996 7078 -964 336 48 0 0 chr20 26249496 26249538 -45904344 + (TG)n Simple_repeat Simple_repeat 1 42 0 223 238 41 34 chr20 26249548 26249695 -45904187 + (CATATA)n Simple_repeat Simple_repeat 6 153 0 * 289 223 12 60 chr20 26249628 26249794 -45904088 + (TATAA)n Simple_repeat Simple_repeat 3 160 0 260 207 83 24 chr20 26249706 26249875 -45904007 + (TATATG)n Simple_repeat Simple_repeat 2 180 0 * 275 65 87 0 chr20 26249880 26249926 -45903956 - L1MC4 LINE L1 -898 7144 7095 2114 124 0 0 chr20 26249926 26250239 -45903643 + AluSx SINE Alu 1 313 0 297 122 0 0 chr20 26250260 26250309 -45903573 + L1MC4 LINE L1 7128 7176 -866 2285 125 0 3 chr20 26250309 26250760 -45903122 + AluSx SINE Alu 1 450 0 3066 231 49 26 chr20 26250760 26251458 -45902424 + L1MC4 LINE L1 7141 7808 -187 2334 135 32 56 chr20 26251458 26251508 -45902374 - MSTB1 LTR MaLR 0 432 382 1626 170 38 35 chr20 26251508 26251797 -45902085 - AluSx SINE Alu -22 290 1 2334 135 32 56 chr20 26251797 26252189 -45901693 - MSTB1 LTR MaLR -50 382 1 3066 231 49 26 chr20 26252189 26252380 -45901502 + L1MC4 LINE L1 7808 7993 -2 1894 133 3 71 chr20 26253889 26254059 -45899823 - AluJo SINE Alu -10 302 122 10577 52 6 0 chr20 26254059 26256127 -45897755 - L1PA5 LINE L1 -4 6150 4077 1894 133 3 71 chr20 26256127 26256141 -45897741 - AluJo SINE Alu -190 122 109 1924 106 6 90 chr20 26256141 26256489 -45897393 - AluSx SINE Alu 0 322 1 1894 133 3 71 chr20 26256489 26256626 -45897256 - AluJo SINE Alu -203 109 1 398 196 65 0 chr20 26256628 26256735 -45897147 + L2 LINE L2 1988 2101 -1213 1790 95 4 0 chr20 26256737 26256969 -45896913 - AluSp SINE Alu -16 297 65 378 263 1 37 chr20 26257150 26257262 -45896620 + MIR SINE MIR 49 156 -64 2189 69 44 0 chr20 26257267 26257541 -45896341 - AluSc SINE Alu -23 286 1 1331 285 108 0 chr20 26257542 26258033 -45895849 + L2 LINE L2 2093 2636 -678 1127 275 138 24 chr20 26258033 26258495 -45895387 - MLT1G1 LTR MaLR 0 595 81 1666 186 0 28 chr20 26258598 26258916 -45894966 + AluJo SINE Alu 1 309 -3 316 352 51 19 chr20 26258978 26259194 -45894688 + L2 LINE L2 2830 3052 -261 613 204 34 27 chr20 26259195 26259342 -45894540 + L1ME2 LINE L1 5932 6079 -85 812 242 114 29 chr20 26259345 26259671 -45894211 - MLT1G LTR MaLR -2 588 163 279 0 0 0 chr20 26259718 26259749 -45894133 + (GA)n Simple_repeat Simple_repeat 1 31 0 332 263 70 59 chr20 26259768 26259875 -45894007 - MLT1G LTR MaLR -379 188 77 2126 128 3 7 chr20 26259875 26260181 -45893701 + AluSx SINE Alu 1 305 -7 332 263 70 59 chr20 26260181 26260259 -45893623 - MLT1G LTR MaLR -490 77 1 269 253 48 0 chr20 26260259 26260342 -45893540 + L1ME2 LINE L1 6077 6163 -1 1975 154 0 0 chr20 26260353 26260665 -45893217 + AluSx SINE Alu 1 312 0 1415 164 16 35 chr20 26260667 26260923 -45892959 + AluJo SINE Alu 1 251 -61 319 237 71 150 chr20 26260925 26261178 -45892704 + L2 LINE L2 3081 3313 0 303 277 24 90 chr20 26261330 26261496 -45892386 - MIR3 SINE MIR -23 185 31 252 220 153 0 chr20 26262712 26262771 -45891111 + L2 LINE L2 3201 3268 -4 2238 109 20 0 chr20 26262827 26263130 -45890752 + AluSx SINE Alu 3 311 -1 1205 49 0 0 chr20 26263595 26263739 -45890143 - L1PA4 LINE L1 -3 6152 6009 821 43 0 0 chr20 26263739 26263833 -45890049 - AluY SINE Alu -13 298 205 4352 130 66 82 chr20 26263833 26264838 -45889044 + pTR5 LTR ERV1 743 2020 -418 304 257 46 18 chr20 26264841 26264950 -45888932 + LTR30 LTR ERV1 544 655 -67 1439 95 5 5 chr20 26264952 26265162 -45888720 + pTR5 LTR ERV1 181 390 -2048 1698 77 0 0 chr20 26265164 26265371 -45888511 - AluY SINE Alu -103 208 2 2138 225 62 40 chr20 26265446 26266047 -45887835 + L1ME1 LINE L1 5548 6161 -5 180 77 0 0 chr20 26266261 26266287 -45887595 + (GA)n Simple_repeat Simple_repeat 2 27 0 342 207 37 12 chr20 26267610 26267692 -45886190 - MER103 DNA DNA -81 85 2 1971 125 47 10 chr20 26267794 26268090 -45885792 - AluJb SINE Alu -5 307 1 2385 180 78 10 chr20 26268449 26268939 -45884943 - Charlie1b DNA MER1_type 0 523 1 557 241 108 31 chr20 26269415 26269610 -45884272 + MLT1J1 LTR MaLR 1 210 -236 265 228 0 18 chr20 26269724 26269781 -45884101 + MLT1I LTR MaLR 345 400 -9 805 189 91 0 chr20 26270080 26270223 -45883659 + AluJb SINE Alu 142 297 -15 466 167 19 9 chr20 26270232 26270340 -45883542 + GA-rich Low_complexity Low_complexity 1 109 0 409 204 91 0 chr20 26270527 26270615 -45883267 - MIR SINE MIR -71 191 96 885 173 152 11 chr20 26270619 26270810 -45883072 - MLT2D LTR ERVL 0 414 197 649 91 11 0 chr20 26270811 26270899 -45882983 - ERVL-D LTR ERVL -2012 3752 3664 * 2712 219 42 7 chr20 26270882 26272049 -45881833 - ERVL-D LTR ERVL -4477 1287 1 1215 214 77 17 chr20 26272056 26272355 -45881527 - MLT2D LTR ERVL -7 407 91 1061 173 0 0 chr20 26272708 26272881 -45881001 - FRAM SINE Alu -3 173 1 2430 87 0 0 chr20 26273296 26273596 -45880286 + AluSc SINE Alu 1 300 -9 2177 109 13 0 chr20 26273789 26274091 -45879791 + AluSx SINE Alu 1 306 -6 409 287 127 6 chr20 26274635 26274792 -45879090 + MIR SINE MIR 79 254 -8 263 315 79 28 chr20 26277209 26277387 -45876495 - HAL1 LINE L1 -568 1939 1753 1853 146 17 3 chr20 26277401 26277695 -45876187 - AluSx SINE Alu -14 298 1 781 132 23 0 chr20 26277713 26277842 -45876040 - AluSq/x SINE Alu -179 133 2 2068 61 0 25 chr20 26277873 26278150 -45875732 - AluY SINE Alu 0 311 42 509 260 5 81 chr20 26278160 26278276 -45875606 - HAL1 LINE L1 -815 1692 1600 2306 90 7 0 chr20 26278276 26278576 -45875306 - AluSx SINE Alu -10 302 1 509 260 5 81 chr20 26278576 26278682 -45875200 - HAL1 LINE L1 -907 1600 1487 200 231 165 50 chr20 26278691 26278812 -45875070 - MIR SINE MIR -5 257 123 2283 78 7 0 chr20 26278869 26279153 -45874729 + AluSc SINE Alu 1 286 -23 369 274 3 36 chr20 26279158 26279270 -45874612 - MIR SINE MIR -64 144 49 251 295 72 43 chr20 26279308 26279515 -45874367 - HAL1 LINE L1 -1036 1471 1259 297 175 0 16 chr20 26279613 26279676 -45874206 - L1MA9 LINE L1 0 6312 6251 574 150 20 30 chr20 26279676 26279776 -45874106 - FRAM SINE Alu -14 162 64 2445 222 89 36 chr20 26279785 26280066 -45873816 - L1ME1 LINE L1 -68 6909 6644 2110 83 4 0 chr20 26280066 26280330 -45873552 - AluSx SINE Alu 0 312 48 2445 222 89 36 chr20 26280330 26281071 -45872811 - L1ME1 LINE L1 -333 6644 5833 2985 224 148 84 chr20 26281079 26281490 -45872392 - L1ME1 LINE L1 -2254 4703 4320 192 77 0 0 chr20 26281490 26281516 -45872366 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 2985 224 148 84 chr20 26281516 26281573 -45872309 - L1ME1 LINE L1 -2637 4320 4268 1498 98 79 9 chr20 26281573 26281788 -45872094 - MER30 DNA MER1_type 0 230 1 2985 224 148 84 chr20 26281788 26282876 -45871006 - L1ME1 LINE L1 -2689 4268 3060 2318 73 0 22 chr20 26282876 26283192 -45870690 - AluY SINE Alu -2 309 1 2985 224 148 84 chr20 26283192 26283244 -45870638 - L1ME1 LINE L1 -3897 3060 3013 2962 147 108 13 chr20 26283234 26283791 -45870091 - L1MB4 LINE L1 -1 6179 5570 * 712 159 32 82 chr20 26283794 26283847 -45870035 - L1ME1 LINE L1 -4102 3036 2982 1822 145 3 26 chr20 26283847 26284150 -45869732 + AluSx SINE Alu 1 296 -16 712 159 32 82 chr20 26284150 26284256 -45869626 - L1ME1 LINE L1 -4156 2982 2888 1880 72 111 43 chr20 26284256 26284535 -45869347 - AluY SINE Alu -13 298 1 712 159 32 82 chr20 26284535 26284594 -45869288 - L1ME1 LINE L1 -4250 2888 2828 2099 114 27 3 chr20 26284744 26285041 -45868841 - AluSx SINE Alu -6 306 3 687 254 263 21 chr20 26285051 26285382 -45868500 - MER57B LTR ERV1 -23 411 1 1067 224 15 0 chr20 26285438 26285639 -45868243 + MER82 DNA MER2_type 449 652 -1 3023 178 30 20 chr20 26286050 26286652 -45867230 - L1MB8 LINE L1 -2 6245 5638 1381 159 14 0 chr20 26286652 26286866 -45867016 - AluJo SINE Alu -36 276 60 433 133 0 0 chr20 26286866 26286926 -45866956 - L1MB8 LINE L1 -623 5630 5571 2043 192 17 128 chr20 26286926 26287457 -45866425 - MER70A LTR ERVL 0 472 1 2665 158 49 80 chr20 26287457 26287643 -45866239 - L1MB8 LINE L1 -668 5575 5385 1828 155 0 17 chr20 26287643 26287939 -45865943 - AluSq SINE Alu -22 291 1 2665 158 49 80 chr20 26287939 26288114 -45865768 - L1MB8 LINE L1 -858 5385 5206 2338 92 0 3 chr20 26288114 26288417 -45865465 + AluSq SINE Alu 3 304 -9 2665 158 49 80 chr20 26288417 26288827 -45865055 - L1MB8 LINE L1 -1037 5206 4822 7294 218 80 48 chr20 26288842 26289651 -45864231 - L1MB8 LINE L1 -1560 4655 3874 2225 170 9 0 chr20 26289651 26289992 -45863890 + MER2 DNA MER2_type 1 344 0 7294 218 80 48 chr20 26289992 26291916 -45861966 - L1MB8 LINE L1 -2341 3874 1883 375 238 50 32 chr20 26292187 26292373 -45861509 - L1ME1 LINE L1 -4589 2368 2185 2296 75 0 0 chr20 26292406 26292740 -45861142 - AluY SINE Alu 0 334 1 1740 89 9 5 chr20 26292743 26292967 -45860915 - AluSg/x SINE Alu -17 295 71 486 289 28 17 chr20 26292976 26293156 -45860726 - L1ME1 LINE L1 -5880 979 798 1549 183 49 3 chr20 26293158 26293443 -45860439 - AluJb SINE Alu -13 299 2 441 0 0 0 chr20 26293443 26293492 -45860390 + (TG)n Simple_repeat Simple_repeat 2 50 0 1105 218 53 15 chr20 26293492 26293754 -45860128 - AluJo SINE Alu -35 277 6 599 199 151 7 chr20 26293853 26293999 -45859883 - L1ME1 LINE L1 -6691 168 2 691 252 81 24 chr20 26294122 26294368 -45859514 + MIR SINE MIR 3 262 0 180 0 0 0 chr20 26295433 26295453 -45858429 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 674 213 14 0 chr20 26295954 26296095 -45857787 + MER58A DNA MER1_type 46 188 -36 844 208 0 0 chr20 26296793 26296937 -45856945 - FRAM SINE Alu -30 146 3 1559 199 42 24 chr20 26296955 26297291 -45856591 - L1MB7 LINE L1 -9 6175 5834 367 347 98 15 chr20 26297913 26298178 -45855704 - L2 LINE L2 -604 2710 2424 221 325 0 0 chr20 26299807 26299884 -45853998 + (TA)n Simple_repeat Simple_repeat 1 77 0 378 0 0 0 chr20 26301998 26302040 -45851842 + (TG)n Simple_repeat Simple_repeat 2 43 0 2110 109 0 3 chr20 26302142 26302447 -45851435 + AluSx SINE Alu 1 304 0 21 0 0 0 chr20 26303095 26303116 -45850766 + AT_rich Low_complexity Low_complexity 1 21 0 351 0 0 0 chr20 26303541 26303580 -45850302 + (CA)n Simple_repeat Simple_repeat 1 39 0 23 0 0 0 chr20 26303866 26303889 -45849993 + AT_rich Low_complexity Low_complexity 1 23 0 398 147 27 0 chr20 26304626 26304701 -45849181 - L1MB4 LINE L1 -5 6175 6099 693 161 67 13 chr20 26305353 26305502 -45848380 + MER58C DNA MER1_type 59 215 0 531 315 88 38 chr20 26306864 26307261 -45846621 - L2 LINE L2 -858 2456 2040 262 258 0 15 chr20 26308130 26308196 -45845686 + Charlie4 DNA MER1_type 1884 1948 -13 2087 127 0 10 chr20 26308319 26308618 -45845264 + AluSx SINE Alu 1 296 -16 2538 250 162 23 chr20 26308706 26309779 -45844103 - L2 LINE L2 -1 3312 2029 916 87 87 0 chr20 26309779 26309906 -45843976 - MER85 DNA T2_type -1 138 1 2538 250 162 23 chr20 26309906 26310124 -45843758 - L2 LINE L2 -1284 2029 1843 207 0 0 0 chr20 26310824 26310847 -45843035 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 1171 156 0 0 chr20 26312280 26312453 -45841429 + AluSg/x SINE Alu 125 297 -13 280 150 0 0 chr20 26313231 26313271 -45840611 + Alu SINE Alu 248 287 -15 564 260 52 74 chr20 26314778 26315009 -45838873 - MIR SINE MIR 0 262 37 28 33 0 49 chr20 26315414 26315475 -45838407 + AT_rich Low_complexity Low_complexity 1 58 0 206 198 12 49 chr20 26315727 26315808 -45838074 + (TTATA)n Simple_repeat Simple_repeat 4 81 0 26 50 0 0 chr20 26315928 26315968 -45837914 + AT_rich Low_complexity Low_complexity 1 40 0 254 277 12 0 chr20 26317878 26317961 -45835921 + (TA)n Simple_repeat Simple_repeat 2 85 0 2246 113 3 0 chr20 26318749 26319058 -45834824 - AluSg SINE Alu 0 310 1 2268 91 7 0 chr20 26320777 26321084 -45832798 - AluY SINE Alu -2 309 1 1330 153 0 0 chr20 26321688 26321911 -45831971 + AluJb SINE Alu 87 309 0 2568 48 0 0 chr20 26322386 26322695 -45831187 + AluY SINE Alu 1 309 -2 2994 186 60 3 chr20 26323359 26324152 -45829730 - L1M3 LINE L1 -645 5538 4701 23 68 0 0 chr20 26324211 26324255 -45829627 + AT_rich Low_complexity Low_complexity 1 44 0 2190 97 0 10 chr20 26324473 26324772 -45829110 - AluSx SINE Alu -16 296 1 296 356 87 0 chr20 26324872 26324976 -45828906 - MIR SINE MIR -146 116 4 253 86 100 0 chr20 26325256 26325326 -45828556 + (TA)n Simple_repeat Simple_repeat 1 77 0 303 282 94 0 chr20 26325328 26325413 -45828469 + L1MC4 LINE L1 6617 6709 -1333 1884 161 0 13 chr20 26325653 26325952 -45827930 + AluJo SINE Alu 4 298 -14 23 33 0 0 chr20 26326378 26326408 -45827474 + AT_rich Low_complexity Low_complexity 1 30 0 190 328 0 0 chr20 26326501 26326562 -45827320 - MIR SINE MIR -57 151 91 1072 121 99 17 chr20 26327846 26328078 -45825804 - L1MA4 LINE L1 -3 6297 6047 26 30 0 0 chr20 26328085 26328118 -45825764 + AT_rich Low_complexity Low_complexity 1 33 0 834 152 38 0 chr20 26328361 26328519 -45825363 - L1MB4 LINE L1 -6 6174 6011 725 169 113 12 chr20 26328527 26328714 -45825168 - L1MB4 LINE L1 -336 5838 5633 216 224 61 0 chr20 26328944 26328993 -45824889 + MIR SINE MIR 41 92 -170 1284 178 220 31 chr20 26328993 26329415 -45824467 + Charlie1b DNA MER1_type 20 521 -2 510 310 43 19 chr20 26329422 26329680 -45824202 - L1MB4 LINE L1 -513 5651 5388 1853 132 38 14 chr20 26331389 26331678 -45822204 + AluSx SINE Alu 1 296 -16 652 226 12 54 chr20 26334878 26335046 -45818836 + MER105 DNA DNA 2 162 -42 1926 72 0 0 chr20 26336078 26336315 -45817567 - AluY SINE Alu -19 292 56 229 267 24 37 chr20 26336363 26336481 -45817401 - L1ME LINE L1 -322 5799 5679 1856 157 7 0 chr20 26336666 26336960 -45816922 + AluJb SINE Alu 3 298 -14 493 96 70 0 chr20 26337939 26338095 -45815787 + (TA)n Simple_repeat Simple_repeat 1 167 0 606 78 39 30 chr20 26338148 26338381 -45815501 + (TA)n Simple_repeat Simple_repeat 1 235 0 2143 93 0 40 chr20 26338405 26338729 -45815153 + AluY SINE Alu 1 311 0 394 287 50 0 chr20 26339183 26339364 -45814518 - L1ME LINE L1 -679 5485 5296 547 264 73 69 chr20 26339596 26339857 -45814025 + MIR SINE MIR 1 262 0 6546 123 46 4 chr20 26340915 26342485 -45811397 - L1MA3 LINE L1 -6 6299 4663 32 43 0 0 chr20 26344591 26344637 -45809245 + AT_rich Low_complexity Low_complexity 1 46 0 1980 246 72 57 chr20 26344802 26345141 -45808741 - L1ME3A LINE L1 -4 6166 5833 2030 138 10 0 chr20 26345141 26345446 -45808436 - AluSg SINE Alu -1 309 2 1980 246 72 57 chr20 26345446 26346096 -45807786 - L1ME3A LINE L1 -337 5833 5160 475 152 65 0 chr20 26346096 26346188 -45807694 + L1MC4 LINE L1 7945 8042 0 2254 264 78 50 chr20 26346250 26347722 -45806160 - L1ME3A LINE L1 -1774 4372 2860 551 291 11 33 chr20 26347768 26347950 -45805932 - L1ME LINE L1 -459 5662 5485 2338 50 0 0 chr20 26347950 26348277 -45805605 - AluY SINE Alu 0 327 1 261 108 0 0 chr20 26348304 26348341 -45805541 + Alu SINE Alu 1 37 -265 886 143 20 7 chr20 26348345 26348492 -45805390 + FRAM SINE Alu 1 146 -30 1963 137 13 3 chr20 26349397 26349697 -45804185 - AluSx SINE Alu -9 303 1 378 327 77 19 chr20 26350604 26350760 -45803122 + MIR SINE MIR 77 241 -21 330 26 0 0 chr20 26353843 26353882 -45800000 + (CA)n Simple_repeat Simple_repeat 2 40 0 523 296 28 17 chr20 26355496 26355672 -45798210 - MIR SINE MIR 0 262 85 1706 168 3 7 chr20 26356646 26356931 -45796951 - AluJb SINE Alu -28 284 1 23 68 0 0 chr20 26357143 26357187 -45796695 + AT_rich Low_complexity Low_complexity 1 44 0 299 286 163 14 chr20 26360261 26360408 -45793474 - MIR3 SINE MIR -25 183 15 308 218 121 100 chr20 26368136 26368416 -45785466 - L1M2 LINE L1 -5706 1143 858 321 269 81 122 chr20 26368876 26369385 -45784497 + L1M2 LINE L1 717 1204 -5645 31 0 0 0 chr20 26372517 26372548 -45781334 + AT_rich Low_complexity Low_complexity 1 31 0 227 229 42 0 chr20 26372696 26372744 -45781138 - L1MC/D LINE L1 -1884 5924 5875 33 56 0 0 chr20 26375553 26375607 -45778275 + AT_rich Low_complexity Low_complexity 1 54 0 25 90 0 0 chr20 26375796 26375863 -45778019 + AT_rich Low_complexity Low_complexity 1 67 0 2508 58 0 0 chr20 26377110 26377405 -45776477 + AluY SINE Alu 17 311 0 329 311 97 15 chr20 26377427 26377623 -45776259 - L3 LINE CR1 -169 1408 1197 2259 159 97 0 chr20 26377805 26378196 -45775686 + MSTB1 LTR MaLR 1 429 -3 318 180 0 0 chr20 26378307 26378368 -45775514 + (TA)n Simple_repeat Simple_repeat 1 61 0 1976 138 3 3 chr20 26378685 26378975 -45774907 - AluSx SINE Alu -22 290 1 1756 183 13 0 chr20 26379187 26379493 -45774389 - AluJb SINE Alu -2 310 1 1102 210 84 52 chr20 26379658 26379771 -45774111 - MER33 DNA MER1_type -2261 324 216 888 126 0 37 chr20 26379771 26379906 -45773976 + FLAM_C SINE Alu 1 130 -3 1102 210 84 52 chr20 26379906 26380102 -45773780 - MER33 DNA MER1_type -2369 216 5 1794 188 52 0 chr20 26380114 26380438 -45773444 + MER58B DNA MER1_type 1 341 0 274 250 50 0 chr20 26380750 26380763 -45773119 - L1MC/D LINE L1 -287 5834 5823 1586 147 16 67 chr20 26380763 26381077 -45772805 - AluJo SINE Alu -14 298 1 274 250 50 0 chr20 26381077 26381186 -45772696 - L1MC/D LINE L1 -298 5823 5719 471 226 96 92 chr20 26381208 26381330 -45772552 - L1MC/D LINE L1 -376 5745 5625 1686 191 0 3 chr20 26381330 26381633 -45772249 - AluJo SINE Alu -10 302 1 471 226 96 92 chr20 26381633 26381771 -45772111 - L1MC/D LINE L1 -496 5625 5484 1999 99 85 3 chr20 26382089 26382372 -45771510 + AluSx SINE Alu 1 306 -6 275 244 69 36 chr20 26382387 26382489 -45771393 + MIR SINE MIR 54 160 -48 1986 153 59 28 chr20 26382603 26382994 -45770888 - L1MA5 LINE L1 0 7002 6600 11381 154 63 87 chr20 26382996 26385033 -45768849 - L1MA5 LINE L1 -816 6032 3850 1015 190 0 77 chr20 26385033 26385254 -45768628 - AluJo SINE Alu -23 289 86 11381 154 63 87 chr20 26385254 26385723 -45768159 - L1MA5 LINE L1 -2998 3850 3371 28311 118 15 76 chr20 26385724 26390870 -45763012 + L1P LINE L1 12 4845 -1301 3685 38 0 2 chr20 26390870 26391285 -45762597 + L1PA6 LINE L1 5735 6150 -4 940 88 22 0 chr20 26391299 26391436 -45762446 + L1MB3 LINE L1 6044 6183 0 3022 77 3 10 chr20 26391451 26391840 -45762042 + L1PA7 LINE L1 5769 6154 0 2317 167 34 23 chr20 26391841 26392453 -45761429 - L1MA5 LINE L1 -3453 3395 2763 1591 179 53 0 chr20 26392453 26392609 -45761273 - AluJb SINE Alu -25 287 110 399 89 0 0 chr20 26392609 26392665 -45761217 + (TG)n Simple_repeat Simple_repeat 1 56 0 1591 179 53 0 chr20 26392665 26392771 -45761111 - AluJb SINE Alu -202 110 11 2317 167 34 23 chr20 26392771 26393231 -45760651 - L1MA5 LINE L1 -4085 2763 2310 972 191 0 6 chr20 26393233 26393401 -45760481 - AluJ SINE Alu -16 296 130 228 67 0 0 chr20 26393403 26393433 -45760449 + (TCCC)n Simple_repeat Simple_repeat 3 32 0 1604 157 30 11 chr20 26393442 26393710 -45760172 - AluSx SINE Alu -39 273 1 850 183 0 29 chr20 26393710 26393847 -45760035 - AluJ SINE Alu -176 136 4 676 224 11 11 chr20 26393855 26394029 -45759853 - L1MA5 LINE L1 -4530 2319 2146 518 184 13 26 chr20 26394034 26394186 -45759696 + C-rich Low_complexity Low_complexity 5 154 0 548 240 189 17 chr20 26394189 26394364 -45759518 - AluJo SINE Alu 0 312 108 2220 136 116 35 chr20 26394364 26394760 -45759122 - MSTA LTR MaLR 0 428 1 9923 132 13 36 chr20 26394794 26396404 -45757478 - MSTA-int LTR MaLR -5 1575 3 2375 128 128 13 chr20 26396406 26396790 -45757092 - MSTA LTR MaLR 0 428 1 769 139 0 0 chr20 26396793 26396901 -45756981 - AluJo SINE Alu -203 109 2 2979 199 100 35 chr20 26396904 26397007 -45756875 - L1MA5 LINE L1 -4665 2184 2089 1033 126 0 161 chr20 26397007 26397237 -45756645 - 7SK RNA RNA 0 193 1 2979 199 100 35 chr20 26397237 26397490 -45756392 - L1MA5 LINE L1 -4760 2089 1854 1540 117 0 0 chr20 26397490 26397696 -45756186 - AluSg/x SINE Alu -19 291 86 2979 199 100 35 chr20 26397696 26398208 -45755674 - L1MA5 LINE L1 -4995 1854 1258 270 253 152 20 chr20 26399125 26399224 -45754658 + MIR3 SINE MIR 45 156 -52 667 216 0 9 chr20 26399383 26399499 -45754383 + FLAM_A SINE Alu 2 116 -17 312 302 167 32 chr20 26399534 26399882 -45754000 + L1ME LINE L1 5337 5731 -390 2204 189 138 51 chr20 26400334 26400574 -45753308 - L1MCb LINE L1 -4835 1729 1511 2222 112 3 0 chr20 26400574 26400868 -45753014 - AluSx SINE Alu -17 295 1 2204 189 138 51 chr20 26400868 26401293 -45752589 - L1MCb LINE L1 -5053 1511 1125 2291 108 0 16 chr20 26401293 26401608 -45752274 - AluSq SINE Alu -3 310 1 2204 189 138 51 chr20 26401608 26401932 -45751950 - L1MCb LINE L1 -5439 1125 630 1645 262 21 36 chr20 26402048 26402574 -45751308 - L1MCb LINE L1 -5407 638 121 2476 80 6 0 chr20 26403198 26403509 -45750373 - AluSq SINE Alu 0 313 1 195 245 61 51 chr20 26403672 26403770 -45750112 - MIR SINE MIR -102 160 62 2010 134 22 0 chr20 26403820 26404122 -45749760 - AluSx SINE Alu 0 308 1 535 259 14 0 chr20 26404131 26404274 -45749608 - L1ME1 LINE L1 -2 6164 6020 * 591 234 101 82 chr20 26404272 26404529 -45749353 - L1M4 LINE L1 -1098 5048 4787 717 268 119 64 chr20 26406379 26406616 -45747266 - L1ME1 LINE L1 -301 5820 5598 2383 70 0 10 chr20 26406616 26406914 -45746968 + AluY SINE Alu 1 295 -16 717 268 119 64 chr20 26406914 26407358 -45746524 - L1ME1 LINE L1 -523 5598 5106 23 0 0 0 chr20 26407375 26407398 -45746484 + AT_rich Low_complexity Low_complexity 1 23 0 1866 196 55 18 chr20 26407813 26407884 -45745998 - LTR52 LTR ERVL -3 418 351 249 33 0 0 chr20 26407884 26407914 -45745968 + (CA)n Simple_repeat Simple_repeat 2 31 0 1866 196 55 18 chr20 26407914 26408241 -45745641 - LTR52 LTR ERVL -70 351 5 1350 182 238 6 chr20 26410336 26410618 -45743264 + MLT2D LTR ERVL 1 367 -30 230 0 33 0 chr20 26410618 26410648 -45743234 + (TA)n Simple_repeat Simple_repeat 2 32 0 1350 182 238 6 chr20 26410648 26410684 -45743198 + MLT2D LTR ERVL 367 393 -4 610 188 9 0 chr20 26410705 26410817 -45743065 - Tigger5 DNA MER2_type 0 2323 2211 2302 115 0 6 chr20 26410832 26411146 -45742736 + AluSx SINE Alu 1 312 0 1529 190 19 35 chr20 26411289 26411600 -45742282 - AluJo SINE Alu -1 311 6 2283 102 0 0 chr20 26412243 26412536 -45741346 - AluSx SINE Alu -19 293 1 191 333 60 24 chr20 26412543 26412627 -45741255 - L2 LINE L2 -16 3256 3170 1814 233 102 19 chr20 26412721 26413370 -45740512 - L1ME1 LINE L1 -1267 4879 4177 2300 204 28 48 chr20 26413387 26413637 -45740245 + L1ME1 LINE L1 3815 4068 -2078 2152 116 10 10 chr20 26413637 26413947 -45739935 + AluSg SINE Alu 1 310 0 2300 204 28 48 chr20 26413947 26414375 -45739507 + L1ME1 LINE L1 4068 4484 -1662 2416 94 0 0 chr20 26414383 26414691 -45739191 + AluSg SINE Alu 1 308 -2 533 165 127 32 chr20 26414693 26414851 -45739031 + L1ME1 LINE L1 4991 5163 -983 * 1011 191 128 83 chr20 26414839 26415262 -45738620 + L1ME1 LINE L1 5723 6164 -2 396 301 107 27 chr20 26415273 26415639 -45738243 - L1MC/D LINE L1 -2159 5649 5255 296 193 23 53 chr20 26416126 26416225 -45737657 + LTR16A1 LTR ERVL 150 244 -206 2822 57 3 11 chr20 26416370 26416737 -45737145 + L1PA7 LINE L1 5788 6151 -3 2378 95 0 0 chr20 26416790 26417095 -45736787 + AluSg SINE Alu 1 305 -5 463 254 179 0 chr20 26417111 26417284 -45736598 + LTR16A LTR ERVL 241 444 -6 303 244 47 71 chr20 26417672 26417799 -45736083 - L1MDa LINE L1 -3961 2579 2456 26 30 0 0 chr20 26418058 26418091 -45735791 + AT_rich Low_complexity Low_complexity 1 33 0 1985 108 4 8 chr20 26418237 26418505 -45735377 - AluSx SINE Alu -14 298 32 2191 216 75 9 chr20 26418892 26419569 -45734313 - L1MC/D LINE L1 -1517 4629 3908 477 118 82 0 chr20 26419581 26419666 -45734216 - AluSg/x SINE Alu -8 304 213 543 217 91 59 chr20 26419668 26419757 -45734125 - L1MC/D LINE L1 -2161 3985 3900 1702 161 28 14 chr20 26419757 26420048 -45733834 - AluSx SINE Alu -17 295 1 543 217 91 59 chr20 26420048 26420179 -45733703 - L1MC/D LINE L1 -2246 3900 3758 423 83 0 0 chr20 26420399 26420459 -45733423 + (TCTA)n Simple_repeat Simple_repeat 3 62 0 1992 224 69 38 chr20 26420464 26420575 -45733307 - L1MC4a LINE L1 -743 5403 5297 1647 154 33 30 chr20 26420575 26420874 -45733008 - AluJo SINE Alu -2 310 11 1992 224 69 38 chr20 26420874 26421514 -45732368 - L1MC4a LINE L1 -849 5297 5149 2623 52 0 0 chr20 26421621 26421929 -45731953 - AluY SINE Alu -3 308 1 3329 241 27 29 chr20 26422505 26423536 -45730346 + L1MC4 LINE L1 6440 7468 -574 1496 131 27 5 chr20 26423701 26423923 -45729959 - MER30 DNA MER1_type 0 230 4 2200 116 3 3 chr20 26424224 26424526 -45729356 - AluSq SINE Alu -11 302 1 1829 146 0 39 chr20 26425220 26425528 -45728354 - AluJb SINE Alu -16 296 1 468 207 68 44 chr20 26425572 26425694 -45728188 + MIR3 SINE MIR 49 176 -32 439 339 61 91 chr20 26426145 26426585 -45727297 - L2 LINE L2 -15 3257 2831 947 245 68 34 chr20 26427177 26427503 -45726379 - MER46C DNA MER2_type -1 337 1 200 317 0 0 chr20 26427538 26427598 -45726284 - L2 LINE L2 -217 3055 2996 5696 107 51 2 chr20 26427653 26429254 -45724628 - L1PA11 LINE L1 0 6174 4492 349 328 167 0 chr20 26429794 26429998 -45723884 + MIR SINE MIR 1 238 -24 2238 121 0 0 chr20 26430072 26430370 -45723512 - AluSx SINE Alu -14 298 1 1069 95 154 0 chr20 26432811 26432980 -45720902 + L1PB1 LINE L1 5957 6151 0 664 190 17 0 chr20 26432989 26433105 -45720777 + FLAM_C SINE Alu 1 118 -15 1440 89 0 0 chr20 26433142 26433321 -45720561 - AluSx SINE Alu -93 219 41 1196 105 70 0 chr20 26433320 26433491 -45720391 + AluSg/x SINE Alu 114 296 -16 * 672 152 0 2 chr20 26433717 26433981 -45719901 + AluSx SINE Alu 1 312 0 735 274 78 24 chr20 26434012 26434395 -45719487 + L1ME LINE L1 5309 5712 -409 331 204 0 73 chr20 26434862 26434999 -45718883 - LTR33 LTR ERVL -391 130 4 1460 251 166 10 chr20 26435462 26435963 -45717919 + MLT1G1 LTR MaLR 2 580 -15 2060 96 48 0 chr20 26436206 26436541 -45717341 + AluSx SINE Alu 1 348 0 348 285 100 18 chr20 26437040 26437085 -45716797 + L1MC5 LINE L1 7660 7700 -342 471 245 172 13 chr20 26437085 26437236 -45716646 - MER96 DNA MER1_type 0 175 1 348 285 100 18 chr20 26437236 26437492 -45716390 + L1MC5 LINE L1 7700 8002 -40 508 271 135 16 chr20 26437821 26438013 -45715869 + MIR SINE MIR 24 238 -24 416 168 53 0 chr20 26439377 26439472 -45714410 + MER5B DNA MER1_type 75 174 -4 463 274 51 40 chr20 26439495 26439670 -45714212 - MER5B DNA MER1_type -1 177 1 254 217 82 94 chr20 26441642 26441886 -45711996 - L1ME LINE L1 -342 5779 5539 270 0 0 0 chr20 26442068 26442098 -45711784 + (TG)n Simple_repeat Simple_repeat 1 30 0 653 292 210 6 chr20 26443334 26443842 -45710040 - L2 LINE L2 0 3313 2704 939 70 78 0 chr20 26444208 26444337 -45709545 - MER85 DNA T2_type 0 139 1 266 267 9 67 chr20 26444564 26444669 -45709213 + MLT1H LTR MaLR 255 353 -196 239 185 0 77 chr20 26444739 26444804 -45709078 + MLT1H LTR MaLR 488 547 -2 745 213 20 0 chr20 26445750 26445900 -45707982 + FRAM SINE Alu 1 153 -13 979 247 80 52 chr20 26446368 26446812 -45707070 + MLT1J LTR MaLR 1 457 -54 294 47 23 0 chr20 26446812 26446855 -45707027 - MLT2B1 LTR ERVL -1 463 420 1428 151 42 85 chr20 26446894 26447038 -45706844 + MER2 DNA MER2_type 1 150 -195 2101 118 38 0 chr20 26447038 26447326 -45706556 - AluSx SINE Alu -13 299 1 1428 151 42 85 chr20 26447326 26447512 -45706370 + MER2 DNA MER2_type 150 317 -28 345 47 0 0 chr20 26447554 26447597 -45706285 + (GA)n Simple_repeat Simple_repeat 2 44 0 2066 171 75 30 chr20 26447601 26448028 -45705854 - MLT2B1 LTR ERVL -74 446 1 274 196 0 0 chr20 26448032 26448088 -45705794 + MLT1J LTR MaLR 454 509 -2 248 274 0 17 chr20 26448522 26448639 -45705243 + CT-rich Low_complexity Low_complexity 2 116 0 948 196 17 124 chr20 26448643 26448990 -45704892 - L1ME3 LINE L1 -22 6140 5831 257 316 15 15 chr20 26449102 26449238 -45704644 + L1MEd LINE L1 1154 1289 -4916 471 254 15 8 chr20 26449383 26449517 -45704365 + L1ME2 LINE L1 6027 6161 -3 237 167 0 0 chr20 26449661 26449709 -45704173 + L1MEd LINE L1 1619 1666 -4730 2267 118 0 0 chr20 26449782 26450087 -45703795 + AluSg SINE Alu 1 305 -5 2599 55 0 3 chr20 26450215 26450526 -45703356 + AluY SINE Alu 1 310 -1 2207 102 0 7 chr20 26450716 26451075 -45702807 + AluSx SINE Alu 1 357 0 1806 79 26 0 chr20 26451081 26451308 -45702574 - AluY SINE Alu -78 233 1 335 22 0 22 chr20 26502634 26502679 -45651203 + (TAGA)n Simple_repeat Simple_repeat 2 45 0 1078 249 73 18 chr20 26503336 26503718 -45650164 - L1ME3A LINE L1 -9 6161 5759 1686 260 43 9 chr20 26506226 26506688 -45647194 - MER110 LTR ERV1 0 491 14 2144 176 52 57 chr20 26506794 26507214 -45646668 + MER47B DNA MER2_type 1 418 0 2451 231 63 27 chr20 26508242 26508864 -45645018 - MER82 DNA MER2_type -1 652 9 235 279 121 7 chr20 26510029 26510169 -45643713 + LTR16A LTR ERVL 106 261 -189 2361 133 47 20 chr20 26510740 26510984 -45642898 - MSTA LTR MaLR 0 428 167 2141 109 0 7 chr20 26510984 26511301 -45642581 + AluSq SINE Alu 1 313 0 2361 133 47 20 chr20 26511301 26511461 -45642421 - MSTA LTR MaLR -261 167 13 2214 171 16 25 chr20 26511680 26512119 -45641763 + L1MC3 LINE L1 6673 7107 -678 240 313 0 0 chr20 26512119 26512186 -45641696 + MLT1F1 LTR MaLR 45 111 -456 583 179 36 0 chr20 26512186 26512298 -45641584 + L1MC3 LINE L1 7175 7290 -495 1933 159 28 0 chr20 26512315 26512636 -45641246 + MER46B DNA MER2_type 32 236 0 2870 143 33 4 chr20 26512636 26513118 -45640764 + L1MC3 LINE L1 7289 7784 -1 1808 259 74 4 chr20 26513195 26513654 -45640228 + MER110 LTR ERV1 1 491 0 532 356 49 11 chr20 26514581 26514949 -45638933 + LTR16B LTR ERVL 76 457 -7 416 244 173 19 chr20 26515271 26515427 -45638455 + LTR33 LTR ERVL 42 221 -300 262 286 10 0 chr20 26515477 26515575 -45638307 + LTR33 LTR ERVL 308 406 -115 21 0 0 0 chr20 26515753 26515774 -45638108 + AT_rich Low_complexity Low_complexity 1 21 0 225 240 0 0 chr20 26516276 26516351 -45637531 + (CA)n Simple_repeat Simple_repeat 2 76 0 192 350 111 14 chr20 26517073 26517290 -45636592 + L2 LINE L2 2842 3079 -193 372 311 6 18 chr20 26517750 26517917 -45635965 + (CATA)n Simple_repeat Simple_repeat 3 167 0 21 0 0 0 chr20 26517995 26518016 -45635866 + AT_rich Low_complexity Low_complexity 1 21 0 215 178 0 22 chr20 26518520 26518565 -45635317 + (TA)n Simple_repeat Simple_repeat 2 45 0 180 128 128 21 chr20 26519463 26519510 -45634372 + MIR SINE MIR 21 72 -136 573 160 11 11 chr20 26520044 26520138 -45633744 + MLT1A2 LTR MaLR 1 94 -280 1378 206 34 31 chr20 26520295 26520644 -45633238 + MLT1A2 LTR MaLR 17 366 -8 1796 111 4 4 chr20 26520777 26521021 -45632861 - AluSq SINE Alu -69 244 1 195 246 0 0 chr20 26521317 26521374 -45632508 + (TA)n Simple_repeat Simple_repeat 2 58 0 739 259 141 71 chr20 26521443 26521877 -45632005 - MLT1F1 LTR MaLR -8 541 37 657 250 45 35 chr20 26522330 26522666 -45631216 - LTR16A LTR ERVL -30 420 21 369 254 18 27 chr20 26522676 26522786 -45631096 - MER5A DNA MER1_type -42 147 39 195 100 0 0 chr20 26523619 26523649 -45630233 + (GAAA)n Simple_repeat Simple_repeat 3 32 0 26 0 0 0 chr20 26525050 26525076 -45628806 + AT_rich Low_complexity Low_complexity 1 26 0 222 62 0 0 chr20 26525143 26525175 -45628707 + (TCTA)n Simple_repeat Simple_repeat 4 35 0 2278 124 0 0 chr20 26525870 26526176 -45627706 + AluSx SINE Alu 1 306 -6 315 240 86 74 chr20 26526693 26526868 -45627014 - MER5B DNA MER1_type -1 177 1 1991 161 3 0 chr20 26526912 26527222 -45626660 - AluJo SINE Alu -1 311 1 311 156 26 65 chr20 26527224 26527301 -45626581 - MER5A DNA MER1_type -115 74 1 1393 282 123 15 chr20 26527319 26527840 -45626042 + MLT1K LTR MaLR 4 580 -8 2147 119 7 0 chr20 26528263 26528557 -45625325 - AluSx SINE Alu -16 296 1 737 240 50 0 chr20 26528620 26528799 -45625083 + MER5A DNA MER1_type 2 189 0 1155 160 52 4 chr20 26529962 26530193 -45623689 - L1MB3 LINE L1 0 6183 5942 2225 112 0 7 chr20 26530527 26530831 -45623051 - AluSx SINE Alu -3 309 8 279 214 0 0 chr20 26530849 26530905 -45622977 + Charlie8 DNA MER1_type 92 147 -2270 2227 245 121 14 chr20 26530916 26531690 -45622192 + L1ME2 LINE L1 5299 6155 -9 498 290 17 40 chr20 26532352 26532528 -45621354 + MIR3 SINE MIR 5 176 -32 1796 229 13 0 chr20 26532868 26533257 -45620625 + L1MD3 LINE L1 7602 7995 0 257 353 10 0 chr20 26533366 26533468 -45620414 + MER5A DNA MER1_type 82 184 -5 258 56 0 0 chr20 26533493 26533529 -45620353 + (TG)n Simple_repeat Simple_repeat 1 36 0 198 0 0 0 chr20 26533528 26533550 -45620332 + (GA)n Simple_repeat Simple_repeat 1 22 0 * 35 0 0 0 chr20 26533646 26533681 -45620201 + AT_rich Low_complexity Low_complexity 1 35 0 588 84 0 0 chr20 26533855 26533938 -45619944 + (GGAA)n Simple_repeat Simple_repeat 2 84 0 1931 128 68 0 chr20 26535692 26535973 -45617909 + AluSx SINE Alu 1 300 -12 1623 145 112 15 chr20 26535996 26536265 -45617617 - AluJo SINE Alu -17 295 1 2022 143 39 26 chr20 26536683 26537069 -45616813 + L1MB3 LINE L1 5793 6183 0 238 324 73 45 chr20 26537576 26537755 -45616127 + L1ME LINE L1 5457 5640 -481 3085 43 8 0 chr20 26537760 26538133 -45615749 - L1PA8 LINE L1 -4 6168 5793 1786 166 10 13 chr20 26538167 26538480 -45615402 + AluJo SINE Alu 1 312 0 330 194 15 0 chr20 26538536 26538603 -45615279 + L2 LINE L2 3201 3268 -4 24 32 0 0 chr20 26538603 26538634 -45615248 + AT_rich Low_complexity Low_complexity 1 31 0 592 191 17 0 chr20 26538758 26538873 -45615009 - FLAM_A SINE Alu -3 139 23 363 221 88 18 chr20 26538881 26538994 -45614888 - MIR SINE MIR -46 216 96 2222 114 0 0 chr20 26540450 26540748 -45613134 + AluSx SINE Alu 1 298 -14 2457 82 0 0 chr20 26541646 26541950 -45611932 - AluSc SINE Alu -5 304 1 216 0 0 0 chr20 26542082 26542106 -45611776 + (T)n Simple_repeat Simple_repeat 1 24 0 2487 139 30 14 chr20 26542137 26542568 -45611314 - L1MB2 LINE L1 -2 6169 5732 618 240 164 70 chr20 26542951 26543396 -45610486 + MLT1H LTR MaLR 62 548 -1 333 299 111 34 chr20 26543722 26543929 -45609953 + MIR SINE MIR 26 248 -14 278 325 106 0 chr20 26544007 26544130 -45609752 - L3 LINE CR1 -107 1470 1335 823 214 86 0 chr20 26544212 26544399 -45609483 + MER3 DNA MER1_type 1 203 -6 220 301 85 26 chr20 26544429 26544582 -45609300 - L3 LINE CR1 -339 1238 1077 341 267 127 68 chr20 26544736 26544972 -45608910 - L3 LINE CR1 -519 1058 809 2319 141 58 19 chr20 26544972 26545384 -45608498 + MSTA LTR MaLR 1 428 0 267 229 14 14 chr20 26545773 26545843 -45608039 + Tigger5 DNA MER2_type 2251 2320 -3 379 209 157 0 chr20 26545894 26546028 -45607854 - MER5C DNA MER1_type -10 314 160 1519 283 75 14 chr20 26546227 26546655 -45607227 + MLT1H1 LTR MaLR 30 493 -62 2062 145 0 22 chr20 26546655 26546966 -45606916 + AluJo SINE Alu 1 304 -8 1519 283 75 14 chr20 26546966 26547031 -45606851 + MLT1H1 LTR MaLR 493 553 -2 1541 256 100 33 chr20 26547358 26547727 -45606155 + MLT1E LTR MaLR 114 520 -73 1381 149 145 30 chr20 26547727 26547978 -45605904 + AluJo SINE Alu 1 285 -27 201 39 0 0 chr20 26547978 26548004 -45605878 + (CAATA)n Simple_repeat Simple_repeat 3 28 0 1541 256 100 33 chr20 26548014 26548094 -45605788 + MLT1E LTR MaLR 520 593 0 1069 236 54 6 chr20 26548094 26548491 -45605391 + MLT1E-int LTR MaLR 1 535 -836 321 332 37 14 chr20 26549306 26549523 -45604359 - L1M4 LINE L1 -2911 3235 3014 276 237 13 13 chr20 26549695 26549771 -45604111 - L1MC4 LINE L1 0 8042 7967 317 281 0 7 chr20 26549792 26549945 -45603937 + (TATG)n Simple_repeat Simple_repeat 3 154 0 434 182 0 68 chr20 26549969 26550161 -45603721 + (TATG)n Simple_repeat Simple_repeat 2 180 0 386 262 0 16 chr20 26550130 26550313 -45603569 + (TG)n Simple_repeat Simple_repeat 1 180 0 * 793 223 33 73 chr20 26550315 26550589 -45603293 - L1MC4 LINE L1 -126 7916 7654 878 144 8 0 chr20 26551009 26551141 -45602741 + AluJo SINE Alu 1 133 -169 657 244 73 76 chr20 26551163 26551182 -45602700 + L1MC4a LINE L1 6181 6199 -1609 2577 60 0 0 chr20 26551182 26551483 -45602399 + AluY SINE Alu 1 301 -10 657 244 73 76 chr20 26551483 26551807 -45602075 + L1MC4a LINE L1 6199 6523 -1285 925 186 6 0 chr20 26551808 26551964 -45601918 + AluJo SINE Alu 134 290 -22 801 113 14 7 chr20 26551968 26552110 -45601772 + (GAAA)n Simple_repeat Simple_repeat 4 146 0 537 110 0 0 chr20 26552113 26552195 -45601687 + (GGGGA)n Simple_repeat Simple_repeat 5 86 0 842 225 23 14 chr20 26552238 26552456 -45601426 + L1MC4 LINE L1 6854 7073 -969 919 246 167 57 chr20 26552789 26553320 -45600562 - MLT1E1 LTR MaLR -3 651 3 540 299 129 25 chr20 26553464 26553906 -45599976 + L1ME4a LINE L1 5634 6121 0 1103 215 116 55 chr20 26555393 26555737 -45598145 - MLT1A1 LTR MaLR 0 365 1 399 41 0 0 chr20 26556426 26556475 -45597407 + (CA)n Simple_repeat Simple_repeat 1 49 0 618 251 131 26 chr20 26557273 26557623 -45596259 + L1ME4a LINE L1 5577 5963 -158 248 276 105 29 chr20 26557640 26557745 -45596137 - MER91B DNA MER1_type -1 189 77 297 0 0 0 chr20 26558418 26558451 -45595431 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 1894 124 3 35 chr20 26558454 26558744 -45595138 - AluSx SINE Alu -31 281 1 1582 179 34 83 chr20 26560638 26561047 -45592835 + MLT1B LTR MaLR 1 389 -1 408 268 113 0 chr20 26562666 26562808 -45591074 + L1MC4 LINE L1 7341 7498 -544 * 667 259 78 96 chr20 26562798 26563426 -45590456 + L1MC4 LINE L1 7320 8042 0 920 174 3 144 chr20 26563539 26563838 -45590044 - L1MB8 LINE L1 0 6178 5922 261 328 0 0 chr20 26573394 26573458 -45580424 + polypurine Low_complexity Low_complexity 3 66 0 323 173 27 0 chr20 26575537 26575612 -45578270 + CT-rich Low_complexity Low_complexity 1 77 0 25 51 0 0 chr20 26575762 26575801 -45578081 + GC_rich Low_complexity Low_complexity 1 39 0 243 226 0 0 chr20 26575935 26575988 -45577894 + C-rich Low_complexity Low_complexity 1 53 0 219 36 0 0 chr20 26577893 26577921 -45575961 + (TTA)n Simple_repeat Simple_repeat 3 30 0 186 71 0 0 chr20 26578452 26578480 -45575402 + (TTTTTG)n Simple_repeat Simple_repeat 1 28 0 22 35 0 0 chr20 26578661 26578690 -45575192 + AT_rich Low_complexity Low_complexity 1 29 0 24 0 0 0 chr20 26578773 26578797 -45575085 + GC_rich Low_complexity Low_complexity 1 24 0 403 259 25 6 chr20 26581371 26581529 -45572353 + CT-rich Low_complexity Low_complexity 2 162 0 342 0 0 0 chr20 26583026 26583064 -45570818 + (CA)n Simple_repeat Simple_repeat 2 39 0 277 250 0 0 chr20 26584573 26584637 -45569245 - L1ME2 LINE L1 -83 6081 6018 1762 196 3 0 chr20 26585568 26585879 -45568003 - AluJo SINE Alu 0 312 1 355 163 153 20 chr20 26586541 26586639 -45567243 + LTR16C LTR ERVL 373 483 -8 1931 174 25 0 chr20 26587261 26587609 -45566273 + MLT1B LTR MaLR 8 369 -27 338 246 282 7 chr20 26589017 26589159 -45564723 - MER5A DNA MER1_type 0 189 9 263 238 48 86 chr20 26589327 26589432 -45564450 - MIR3 SINE MIR -1 207 107 224 196 51 165 chr20 26589634 26589792 -45564090 + MIR SINE MIR 82 221 -41 1009 176 16 0 chr20 26589984 26590171 -45563711 + MER3 DNA MER1_type 1 190 -19 287 238 100 56 chr20 26590036 26590196 -45563686 - MER3 DNA MER1_type -8 201 35 * 432 229 9 0 chr20 26590592 26590697 -45563185 - Charlie4 DNA MER1_type 0 1961 1856 2476 103 0 0 chr20 26592419 26592731 -45561151 + AluSx SINE Alu 1 312 0 2128 110 40 3 chr20 26593241 26593541 -45560341 + AluSx SINE Alu 1 311 -1 22 0 0 0 chr20 26594529 26594551 -45559331 + AT_rich Low_complexity Low_complexity 1 22 0 2888 217 30 19 chr20 26595004 26595737 -45558145 - L1MC4a LINE L1 0 7808 7068 938 269 29 8 chr20 26596639 26596884 -45556998 - MIR SINE MIR -11 251 2 923 202 0 12 chr20 26597269 26597442 -45556440 - FAM SINE Alu 0 175 5 1534 269 77 27 chr20 26598472 26598976 -45554906 - MLT1G LTR MaLR 0 590 54 1376 199 31 90 chr20 26598976 26599364 -45554518 + MLT1A1 LTR MaLR 1 365 0 1534 269 77 27 chr20 26599364 26599421 -45554461 - MLT1G LTR MaLR -536 54 1 361 242 40 30 chr20 26599521 26599620 -45554262 - MER5A DNA MER1_type -1 188 78 639 304 110 19 chr20 26600024 26600287 -45553595 + LTR16C LTR ERVL 85 371 -120 1236 214 73 38 chr20 26600287 26600628 -45553254 + MLT1A1 LTR MaLR 1 353 -12 460 255 28 0 chr20 26600857 26600963 -45552919 + LTR16C LTR ERVL 383 491 0 2406 89 0 10 chr20 26602892 26603196 -45550686 + AluY SINE Alu 1 301 -10 437 263 168 44 chr20 26603215 26603463 -45550419 - L1MEd LINE L1 -4729 1581 1365 1986 125 33 20 chr20 26603463 26603768 -45550114 - AluSx SINE Alu -3 309 1 437 263 168 44 chr20 26603768 26603951 -45549931 - L1MEd LINE L1 -4945 1365 1063 190 393 22 7 chr20 26603967 26604102 -45549780 + L2 LINE L2 2212 2348 -966 4358 154 56 2 chr20 26604116 26604936 -45548946 - L1MB5 LINE L1 -21 6153 5290 338 289 158 9 chr20 26604937 26605051 -45548831 - L1MEd LINE L1 -5062 1057 927 612 132 0 0 chr20 26605051 26605142 -45548740 + 5S rRNA rRNA 1 91 -30 590 240 63 52 chr20 26605145 26605512 -45548370 - L1MEd LINE L1 -5187 932 562 343 256 56 8 chr20 26605915 26606040 -45547842 + MLT1I LTR MaLR 13 143 -266 22716 46 1 6 chr20 26606136 26609740 -45544142 + L1PA5 LINE L1 2546 6154 0 329 164 90 0 chr20 26609938 26610005 -45543877 + LTR54B LTR ERV1 1 73 -425 1839 79 26 0 chr20 26610632 26610859 -45543023 + AluY SINE Alu 1 233 -78 2230 105 0 7 chr20 26610865 26611224 -45542658 - AluSx SINE Alu 0 357 1 2661 55 0 3 chr20 26611420 26611732 -45542150 - AluY SINE Alu 0 311 1 2307 118 0 0 chr20 26611860 26612165 -45541717 - AluSg SINE Alu -5 305 1 228 274 212 9 chr20 26612238 26612351 -45541531 - L1MEc LINE L1 -4730 1666 1531 480 254 15 8 chr20 26612430 26612564 -45541318 - L1ME2 LINE L1 -3 6161 6027 280 316 15 15 chr20 26612709 26612845 -45541037 - L1MEc LINE L1 -4916 1289 1154 984 193 17 124 chr20 26612957 26613304 -45540578 + L1ME3 LINE L1 5831 6140 -22 248 274 0 17 chr20 26613308 26613425 -45540457 + GA-rich Low_complexity Low_complexity 2 116 0 281 196 0 0 chr20 26613859 26613915 -45539967 - MLT1J LTR MaLR -2 509 454 2058 181 69 35 chr20 26613919 26614350 -45539532 + MLT2B1 LTR ERVL 1 451 -69 381 43 0 0 chr20 26614350 26614397 -45539485 + (TC)n Simple_repeat Simple_repeat 2 48 0 2058 181 69 35 chr20 26614397 26614428 -45539454 + MLT2B1 LTR ERVL 451 479 -41 1429 154 42 85 chr20 26614439 26614625 -45539257 - MER2 DNA MER2_type -28 317 150 2121 118 38 0 chr20 26614625 26614912 -45538970 + AluSx SINE Alu 1 298 -14 1429 154 42 85 chr20 26614912 26615056 -45538826 - MER2 DNA MER2_type -195 150 1 297 47 23 0 chr20 26615095 26615138 -45538744 + MLT2C2 LTR ERVL 420 463 -1 * 1020 245 80 52 chr20 26615138 26615582 -45538300 - MLT1J LTR MaLR -54 457 1 802 207 20 0 chr20 26616050 26616200 -45537682 - FRAM SINE Alu -13 153 1 244 185 0 77 chr20 26617146 26617211 -45536671 - MLT1H LTR MaLR -2 547 488 277 267 9 67 chr20 26617281 26617386 -45536496 - MLT1H LTR MaLR -196 353 255 939 70 78 0 chr20 26617613 26617742 -45536140 + MER85 DNA T2_type 1 139 0 653 292 210 6 chr20 26618108 26618616 -45535266 + L2 LINE L2 2704 3313 0 288 0 0 0 chr20 26619852 26619884 -45533998 + (CA)n Simple_repeat Simple_repeat 1 32 0 254 217 82 94 chr20 26620066 26620310 -45533572 + L1ME LINE L1 5539 5779 -342 463 274 51 40 chr20 26622280 26622455 -45531427 + MER5B DNA MER1_type 1 177 -1 409 170 53 0 chr20 26622479 26622573 -45531309 - MER5B DNA MER1_type -5 173 75 485 276 135 16 chr20 26623937 26624129 -45529753 - MIR SINE MIR -24 238 24 348 285 100 18 chr20 26624458 26624714 -45529168 - L1MC5 LINE L1 -40 8002 7700 471 245 172 13 chr20 26624714 26624865 -45529017 + MER96 DNA MER1_type 1 175 0 348 285 100 18 chr20 26624865 26624910 -45528972 - L1MC5 LINE L1 -342 7700 7660 2083 92 48 0 chr20 26625409 26625744 -45528138 - AluSx SINE Alu 0 348 1 1460 251 166 10 chr20 26625987 26626488 -45527394 - MLT1G1 LTR MaLR -15 580 2 331 204 0 73 chr20 26626951 26627088 -45526794 + LTR33 LTR ERVL 4 130 -391 735 274 78 24 chr20 26627555 26627938 -45525944 - L1ME LINE L1 -409 5712 5309 672 168 0 0 chr20 26627969 26628082 -45525800 - AluSx SINE Alu 0 310 198 1065 139 0 0 chr20 26628082 26628233 -45525649 - AluSx SINE Alu -162 151 1 1196 105 70 0 chr20 26628459 26628630 -45525252 - AluSg/x SINE Alu -16 296 114 * 1440 89 0 0 chr20 26628629 26628808 -45525074 + AluSx SINE Alu 41 219 -93 664 190 17 0 chr20 26628845 26628961 -45524921 - FLAM_C SINE Alu -15 118 1 1069 95 154 0 chr20 26628970 26629139 -45524743 - L1PB1 LINE L1 0 6151 5957 2219 122 0 0 chr20 26631580 26631876 -45522006 + AluSx SINE Alu 1 296 -16 349 328 167 0 chr20 26631950 26632154 -45521728 - MIR SINE MIR -24 238 1 5684 108 51 2 chr20 26632694 26634295 -45519587 + L1PA11 LINE L1 4492 6174 0 200 317 0 0 chr20 26634350 26634410 -45519472 + L2 LINE L2 2996 3055 -217 947 245 68 34 chr20 26634445 26634771 -45519111 + MER46C DNA MER2_type 1 337 -1 439 339 61 91 chr20 26635363 26635803 -45518079 + L2 LINE L2 2831 3257 -15 468 207 68 44 chr20 26636254 26636376 -45517506 - MIR3 SINE MIR -32 176 49 1829 146 0 39 chr20 26636420 26636728 -45517154 + AluJb SINE Alu 1 296 -16 2215 113 3 3 chr20 26637422 26637724 -45516158 + AluSq SINE Alu 1 302 -11 1496 131 27 5 chr20 26638025 26638247 -45515635 + MER30 DNA MER1_type 4 230 0 3329 241 27 29 chr20 26638412 26639443 -45514439 - L1MC4 LINE L1 -574 7468 6440 2632 52 0 0 chr20 26640019 26640328 -45513554 + AluY SINE Alu 1 309 -2 2030 223 69 37 chr20 26640435 26641074 -45512808 + L1MC4a LINE L1 5149 5297 -849 1647 154 33 30 chr20 26641074 26641373 -45512509 + AluJo SINE Alu 11 310 -2 2030 223 69 37 chr20 26641373 26641484 -45512398 + L1MC4a LINE L1 5297 5403 -743 423 83 0 0 chr20 26641489 26641549 -45512333 + (TAGA)n Simple_repeat Simple_repeat 3 62 0 543 217 91 59 chr20 26641769 26641900 -45511982 + L1MC/D LINE L1 3758 3900 -2246 1702 161 28 14 chr20 26641900 26642191 -45511691 + AluSx SINE Alu 1 295 -17 543 217 91 59 chr20 26642191 26642280 -45511602 + L1MC/D LINE L1 3900 3985 -2161 477 118 82 0 chr20 26642282 26642367 -45511515 + AluSg/x SINE Alu 213 304 -8 2191 216 75 9 chr20 26642379 26643056 -45510826 + L1MC/D LINE L1 3908 4629 -1517 1985 108 4 8 chr20 26643443 26643711 -45510171 + AluSx SINE Alu 32 298 -14 26 30 0 0 chr20 26643857 26643890 -45509992 + AT_rich Low_complexity Low_complexity 1 33 0 303 244 47 71 chr20 26644149 26644276 -45509606 + L1ME1 LINE L1 2456 2579 -3961 443 266 179 0 chr20 26644664 26644837 -45509045 - LTR16A LTR ERVL -6 444 241 2229 92 0 0 chr20 26644853 26645158 -45508724 - AluSg SINE Alu 0 305 1 2830 60 0 11 chr20 26645211 26645578 -45508304 - L1PA7 LINE L1 -4 6150 5788 296 193 23 53 chr20 26645723 26645822 -45508060 - LTR16A1 LTR ERVL -206 244 150 396 301 107 27 chr20 26646309 26646675 -45507207 + L1MC/D LINE L1 5255 5649 -2159 996 194 128 83 chr20 26646686 26647109 -45506773 - L1ME1 LINE L1 -2 6164 5723 533 165 127 32 chr20 26647097 26647255 -45506627 - L1ME1 LINE L1 -983 5163 4991 * 2429 91 0 0 chr20 26647257 26647565 -45506317 - AluSg SINE Alu -2 308 1 2195 222 28 41 chr20 26647573 26648001 -45505881 - L1ME1 LINE L1 -1662 4484 4067 2167 113 10 10 chr20 26648001 26648311 -45505571 - AluSg SINE Alu 0 310 1 2195 222 28 41 chr20 26648311 26648561 -45505321 - L1ME1 LINE L1 -2079 4067 3815 1541 233 102 19 chr20 26648578 26649227 -45504655 + L1ME1 LINE L1 4571 5273 -1267 199 333 60 24 chr20 26649321 26649405 -45504477 + L2 LINE L2 3170 3256 -16 2321 96 0 0 chr20 26649412 26649705 -45504177 + AluSx SINE Alu 1 293 -19 1565 190 19 35 chr20 26650348 26650659 -45503223 + AluJo SINE Alu 6 311 -1 2311 115 0 6 chr20 26650802 26651116 -45502766 - AluSx SINE Alu 0 312 1 560 188 9 0 chr20 26651131 26651243 -45502639 + Tigger5 DNA MER2_type 2211 2323 0 1310 189 180 3 chr20 26651264 26651598 -45502284 - MLT2C1 LTR ERVL -4 393 1 1695 193 55 18 chr20 26653693 26654020 -45499862 + LTR52 LTR ERVL 5 351 -70 249 33 0 0 chr20 26654020 26654050 -45499832 + (TG)n Simple_repeat Simple_repeat 2 31 0 1695 193 55 18 chr20 26654050 26654121 -45499761 + LTR52 LTR ERVL 351 418 -3 23 0 0 0 chr20 26654536 26654559 -45499323 + AT_rich Low_complexity Low_complexity 1 23 0 520 285 109 43 chr20 26654641 26655020 -45498862 + L1ME1 LINE L1 5567 5999 -516 2365 70 0 10 chr20 26655020 26655318 -45498564 - AluY SINE Alu -16 295 1 520 285 109 43 chr20 26655318 26655539 -45498343 + L1ME1 LINE L1 5999 6204 -311 493 231 102 82 chr20 26657405 26657660 -45496222 + L1M4 LINE L1 4787 5046 -1100 485 256 15 0 chr20 26657660 26657797 -45496085 + L1ME1 LINE L1 6414 6552 -8 2026 134 22 0 chr20 26657812 26658114 -45495768 + AluSx SINE Alu 1 308 0 199 245 61 51 chr20 26658164 26658262 -45495620 + MIR SINE MIR 62 160 -102 2478 75 7 0 chr20 26658425 26658732 -45495150 + AluSq SINE Alu 1 309 -4 1447 264 21 35 chr20 26659355 26659875 -45494007 + L1MCb LINE L1 121 633 -5412 1923 191 138 49 chr20 26659997 26660321 -45493561 + L1MCb LINE L1 630 924 -5640 2293 108 0 16 chr20 26660321 26660635 -45493247 + AluSq SINE Alu 1 309 -4 1923 191 138 49 chr20 26660635 26661059 -45492823 + L1MCb LINE L1 924 1309 -5255 2219 113 3 0 chr20 26661059 26661352 -45492530 + AluSx SINE Alu 1 294 -18 1923 191 138 49 chr20 26661352 26661592 -45492290 + L1MCb LINE L1 1309 1729 -4835 229 219 81 65 chr20 26662051 26662174 -45491708 - L1ME LINE L1 -397 5724 5600 627 216 0 9 chr20 26662427 26662543 -45491339 - FLAM_A SINE Alu -17 116 2 273 253 152 20 chr20 26662702 26662801 -45491081 - MIR3 SINE MIR -52 156 45 2577 200 106 35 chr20 26663718 26664230 -45489652 + L1MA5 LINE L1 1258 1732 -5117 1545 117 0 0 chr20 26664230 26664436 -45489446 + AluSg/x SINE Alu 88 293 -19 2577 200 106 35 chr20 26664436 26664689 -45489193 + L1MA5 LINE L1 1732 2094 -4755 949 126 0 161 chr20 26664689 26664919 -45488963 + 7SK RNA RNA 1 193 0 2577 200 106 35 chr20 26664919 26665017 -45488865 + L1MA5 LINE L1 2094 2184 -4665 725 138 0 0 chr20 26665019 26665128 -45488754 + AluJ SINE Alu 1 109 -203 2208 125 128 13 chr20 26665131 26665515 -45488367 + MSTA LTR MaLR 1 428 0 9192 132 13 36 chr20 26665517 26667127 -45486755 + MSTA-int LTR MaLR 3 1575 -5 2089 129 116 35 chr20 26667161 26667557 -45486325 + MSTA LTR MaLR 1 428 0 534 243 181 17 chr20 26667557 26667733 -45486149 + AluJ SINE Alu 108 312 0 518 201 13 19 chr20 26667720 26667887 -45485995 + G-rich Low_complexity Low_complexity 1 165 0 * 676 229 11 11 chr20 26667881 26668066 -45485816 + L1MA5 LINE L1 2143 2319 -4519 966 223 29 24 chr20 26668074 26668211 -45485671 + AluJo SINE Alu 4 141 -171 1604 157 30 11 chr20 26668211 26668479 -45485403 + AluSx SINE Alu 1 273 -39 228 67 0 0 chr20 26668488 26668518 -45485364 + (GGGA)n Simple_repeat Simple_repeat 3 32 0 972 191 0 6 chr20 26668520 26668688 -45485194 + FRAM SINE Alu 1 160 -16 2991 168 34 23 chr20 26668690 26669150 -45484732 + L1MA5 LINE L1 2310 2763 -4085 1607 175 53 0 chr20 26669150 26669256 -45484626 + AluJb SINE Alu 11 110 -202 381 93 0 0 chr20 26669256 26669310 -45484572 + (CA)n Simple_repeat Simple_repeat 1 54 0 1607 175 53 0 chr20 26669310 26669466 -45484416 + AluJb SINE Alu 110 287 -25 2991 168 34 23 chr20 26669466 26670078 -45483804 + L1MA5 LINE L1 2763 3395 -3453 3022 77 3 10 chr20 26670079 26670468 -45483414 - L1PA7 LINE L1 0 6154 5769 955 80 22 0 chr20 26670484 26670621 -45483261 - L1MB3 LINE L1 0 6183 6044 3685 38 0 2 chr20 26670635 26671052 -45482830 - L1PA6 LINE L1 -4 6150 5735 28307 118 15 75 chr20 26671052 26676194 -45477688 - L1P LINE L1 -1303 4843 12 11400 154 63 87 chr20 26676195 26676664 -45477218 + L1MA5 LINE L1 3371 3850 -2998 1015 190 0 77 chr20 26676664 26676885 -45476997 + AluJo SINE Alu 86 289 -23 11400 154 63 87 chr20 26676885 26678922 -45474960 + L1MA5 LINE L1 3850 6032 -816 1986 153 59 28 chr20 26678924 26679315 -45474567 + L1MA5 LINE L1 6600 7002 0 275 244 69 36 chr20 26679429 26679531 -45474351 - MIR SINE MIR -48 160 54 2017 98 84 3 chr20 26679546 26679831 -45474051 - AluSx SINE Alu -4 308 1 471 226 96 92 chr20 26680149 26680287 -45473595 + L1ME LINE L1 5484 5625 -496 1686 191 0 3 chr20 26680287 26680590 -45473292 + AluJo SINE Alu 1 302 -10 471 226 96 92 chr20 26680590 26680712 -45473170 + L1ME LINE L1 5625 5745 -376 274 250 50 0 chr20 26680734 26680843 -45473039 + L1ME LINE L1 5719 5823 -298 1586 147 16 67 chr20 26680843 26681157 -45472725 + AluJo SINE Alu 1 298 -14 274 250 50 0 chr20 26681157 26681170 -45472712 + L1ME LINE L1 5823 5834 -287 1794 188 52 0 chr20 26681482 26681806 -45472076 - MER58B DNA MER1_type 0 341 1 1102 210 84 52 chr20 26681818 26682014 -45471868 + MER33 DNA MER1_type 5 216 -2369 888 126 0 37 chr20 26682014 26682149 -45471733 - FLAM_C SINE Alu -3 130 1 1102 210 84 52 chr20 26682149 26682262 -45471620 + MER33 DNA MER1_type 216 324 0 1734 186 13 0 chr20 26682427 26682733 -45471149 + AluJb SINE Alu 1 310 -2 1976 138 3 3 chr20 26682945 26683235 -45470647 + AluSx SINE Alu 1 290 -22 226 185 0 74 chr20 26683530 26683611 -45470271 - L1MCa LINE L1 -4346 2080 2006 2239 161 97 0 chr20 26683724 26684115 -45469767 - MSTB1 LTR MaLR -3 429 1 329 311 97 15 chr20 26684297 26684493 -45469389 + L3 LINE CR1 1197 1408 -169 2481 61 0 0 chr20 26684515 26684810 -45469072 - AluY SINE Alu 0 311 17 2559 183 13 18 chr20 26686046 26686555 -45467327 + L1MA10 LINE L1 5808 6305 0 492 242 170 7 chr20 26687006 26687159 -45466723 - MLT1K LTR MaLR -14 574 397 574 357 25 37 chr20 26687201 26687430 -45466452 - MLT1K LTR MaLR -269 319 94 9721 69 5 36 chr20 26687430 26689484 -45464398 - L1PA6 LINE L1 0 6154 4128 574 357 25 37 chr20 26689484 26689576 -45464306 - MLT1K LTR MaLR -494 94 2 327 325 101 18 chr20 26689579 26689748 -45464134 - MIR SINE MIR -3 259 77 2130 108 3 30 chr20 26690027 26690332 -45463550 - AluSx SINE Alu -14 298 2 1738 220 65 39 chr20 26690698 26691189 -45462693 - Charlie4a DNA MER1_type 0 508 5 261 256 157 22 chr20 26691245 26691395 -45462487 - MIR SINE MIR -62 146 12 1266 189 88 135 chr20 26692360 26692952 -45460930 + L1MC4 LINE L1 7479 8042 0 22 52 0 35 chr20 26693244 26693273 -45460609 + AT_rich Low_complexity Low_complexity 1 29 -27 1775 156 6 61 chr20 26693273 26693601 -45460281 - AluJo SINE Alu -2 310 1 22 52 0 35 chr20 26693601 26693629 -45460253 + AT_rich Low_complexity Low_complexity 29 56 0 594 278 140 50 chr20 26694138 26694629 -45459253 + L2 LINE L2 2727 3266 -47 247 359 57 9 chr20 26694957 26695063 -45458819 - MIR SINE MIR -61 147 37 3490 128 8 14 chr20 26695716 26696216 -45457666 - LOR1a LTR ERV1 0 497 1 190 244 67 0 chr20 26696454 26696499 -45457383 - MIR SINE MIR -72 136 89 829 243 187 88 chr20 26696692 26697397 -45456485 - HAL1 LINE L1 -261 2246 1472 300 222 25 8 chr20 26697405 26697649 -45456233 + (CATATA)n Simple_repeat Simple_repeat 1 248 0 1309 236 67 36 chr20 26697661 26698090 -45455792 - HAL1 LINE L1 -1071 1436 989 2266 131 0 61 chr20 26698090 26698449 -45455433 + MER1B DNA MER1_type 1 337 0 1309 236 67 36 chr20 26698449 26698515 -45455367 - HAL1 LINE L1 -1518 989 926 474 149 47 47 chr20 26698547 26698654 -45455228 - MER105 DNA DNA -3 201 95 1765 230 148 5 chr20 26698713 26699152 -45454730 + MLT1D LTR MaLR 1 502 -3 1854 278 118 12 chr20 26699157 26699920 -45453962 - HAL1 LINE L1 -1653 854 11 1651 196 10 6 chr20 26699961 26700272 -45453610 - AluJo SINE Alu 0 312 1 222 286 57 67 chr20 26700278 26700383 -45453499 - MIR SINE MIR -70 192 89 619 144 22 44 chr20 26700619 26700800 -45453082 + GA-rich Low_complexity Low_complexity 4 180 0 302 121 0 17 chr20 26700817 26700875 -45453007 + (GGAA)n Simple_repeat Simple_repeat 3 59 0 897 202 165 53 chr20 26701019 26701641 -45452241 + LTR50 LTR ERVL 3 779 -16 7484 112 6 44 chr20 26702555 26703741 -45450141 - L1MA3 LINE L1 -5 6300 5210 2105 133 0 3 chr20 26703741 26704035 -45449847 - AluSx SINE Alu -19 293 1 7484 112 6 44 chr20 26704035 26704665 -45449217 - L1MA3 LINE L1 -1095 5210 4558 2742 235 31 43 chr20 26705121 26705732 -45448150 + L1ME1 LINE L1 5443 6045 -121 441 130 0 0 chr20 26705732 26705801 -45448081 - L1MA9 LINE L1 -5 6307 6239 2742 235 31 43 chr20 26705801 26705907 -45447975 + L1ME1 LINE L1 6045 6151 -15 24 0 0 0 chr20 26705928 26705952 -45447930 + AT_rich Low_complexity Low_complexity 1 24 0 2488 246 107 11 chr20 26705962 26706748 -45447134 + L1MC4 LINE L1 6816 7676 -366 2191 155 14 0 chr20 26706768 26707123 -45446759 + MER47A DNA MER2_type 1 360 -6 536 278 90 45 chr20 26707138 26707426 -45446456 + L1MC4 LINE L1 7722 8022 -20 547 291 53 53 chr20 26707481 26707766 -45446116 + L1ME4a LINE L1 5494 5778 -2030 225 333 136 14 chr20 26707812 26707959 -45445923 + MIR SINE MIR 88 252 -10 308 286 50 64 chr20 26708008 26708291 -45445591 + L1ME4a LINE L1 5836 6114 -7 1579 172 50 7 chr20 26709892 26710171 -45443711 - AluJb SINE Alu -21 291 1 251 277 149 14 chr20 26710224 26710372 -45443510 + MIR3 SINE MIR 12 179 -29 458 297 99 39 chr20 26710499 26710731 -45443151 - MIR SINE MIR 0 262 17 359 328 17 47 chr20 26711260 26711492 -45442390 - L1MC4a LINE L1 -1966 5842 5618 371 21 21 0 chr20 26712054 26712102 -45441780 + (CA)n Simple_repeat Simple_repeat 1 49 0 333 0 0 0 chr20 26712333 26712370 -45441512 + (TG)n Simple_repeat Simple_repeat 2 38 0 3514 40 0 0 chr20 26712392 26712788 -45441094 - L1PA4 LINE L1 0 6155 5760 590 233 103 27 chr20 26713001 26713224 -45440658 + MER5C DNA MER1_type 3 242 -82 904 191 17 0 chr20 26713224 26713402 -45440480 - AluJo SINE Alu -10 302 122 943 229 123 108 chr20 26714013 26714598 -45439284 - MLT1G1 LTR MaLR 0 595 2 186 208 0 0 chr20 26715353 26715401 -45438481 + (TG)n Simple_repeat Simple_repeat 1 48 0 281 272 0 44 chr20 26715421 26715535 -45438347 + (TG)n Simple_repeat Simple_repeat 1 109 0 289 250 0 24 chr20 26715547 26715711 -45438171 + (TATG)n Simple_repeat Simple_repeat 4 163 0 202 220 70 5 chr20 26715856 26715941 -45437941 - MIR SINE MIR -95 113 17 1177 297 68 69 chr20 26717779 26718897 -45434985 + HAL1 LINE L1 816 1932 -575 1490 177 115 10 chr20 26718958 26719263 -45434619 - MER44D DNA MER2_type -1 608 2 1123 100 0 18 chr20 26719694 26719852 -45434030 + L1P LINE L1 3323 3479 -2667 5079 59 7 0 chr20 26719852 26720464 -45433418 + L1PA8 LINE L1 5555 6170 -2 1123 100 0 18 chr20 26720464 26720475 -45433407 + L1P LINE L1 3479 3489 -2657 678 253 31 0 chr20 26720552 26720714 -45433168 - LTR16C LTR ERVL -2 489 323 272 281 31 10 chr20 26720741 26720837 -45433045 - LTR16C LTR ERVL -383 108 11 238 196 0 0 chr20 26721301 26721347 -45432535 + L2 LINE L2 3268 3313 0 693 251 177 79 chr20 26721521 26721939 -45431943 - LTR16C LTR ERVL -32 459 1 257 310 77 10 chr20 26721974 26722100 -45431782 - L2 LINE L2 -349 2923 2791 328 337 89 37 chr20 26723049 26723111 -45430771 - MIR SINE MIR 0 262 205 1720 259 109 45 chr20 26723111 26723374 -45430508 - MLT1G1 LTR MaLR 0 595 350 2234 100 40 3 chr20 26723374 26723673 -45430209 - AluSg SINE Alu 0 310 1 1720 259 109 45 chr20 26723673 26723968 -45429914 - MLT1G1 LTR MaLR -245 350 1 328 337 89 37 chr20 26723968 26724151 -45429731 - MIR SINE MIR -57 205 4 334 261 33 72 chr20 26724202 26724355 -45429527 + MIR SINE MIR 61 207 -55 228 265 51 10 chr20 26724484 26724582 -45429300 - MLT1J LTR MaLR 0 511 410 343 285 33 98 chr20 26724802 26725076 -45428806 + MER112 DNA MER1_type 4 259 -1 755 148 0 70 chr20 26725077 26725132 -45428750 + FLAM_A SINE Alu 1 58 -253 3141 137 26 26 chr20 26725132 26725628 -45428254 + LOR1a LTR ERV1 2 497 0 755 148 0 70 chr20 26725628 26725888 -45427994 + FLAM_A SINE Alu 58 142 -169 2976 276 83 42 chr20 26726086 26727124 -45426758 + HAL1 LINE L1 2 1161 -1346 1118 162 0 22 chr20 26727124 26727303 -45426579 + FAM SINE Alu 1 175 0 2976 276 83 42 chr20 26727303 26727879 -45426003 + HAL1 LINE L1 1161 1712 -795 347 275 70 79 chr20 26728150 26728379 -45425503 + HAL1 LINE L1 1721 1947 -560 879 210 194 46 chr20 26728442 26728858 -45425024 + MER66A LTR ERV1 96 478 0 678 266 122 42 chr20 26728881 26729235 -45424647 + HAL1 LINE L1 1976 2357 -150 287 286 36 64 chr20 26729296 26729436 -45424446 + HAL1 LINE L1 2360 2495 -12 26 30 0 0 chr20 26729473 26729506 -45424376 + AT_rich Low_complexity Low_complexity 1 33 0 243 355 116 0 chr20 26730281 26730436 -45423446 + MIR SINE MIR 77 249 -13 619 289 62 8 chr20 26730603 26730845 -45423037 + MIR SINE MIR 5 259 -3 255 301 126 10 chr20 26731161 26731264 -45422618 + MIR SINE MIR 36 150 -58 1025 314 41 22 chr20 26731282 26731821 -45422061 + L1M4 LINE L1 4110 4658 -1488 453 256 280 0 chr20 26731824 26731992 -45421890 + MER20 DNA MER1_type 4 218 -1 330 236 89 58 chr20 26731993 26732184 -45421698 + L1M4 LINE L1 4651 4847 -1299 484 225 39 39 chr20 26732198 26732352 -45421530 + MIR SINE MIR 63 218 -44 1825 174 0 7 chr20 26732400 26732694 -45421188 + AluJb SINE Alu 1 292 -20 754 229 60 20 chr20 26732846 26733047 -45420835 - MER3 DNA MER1_type 0 209 1 25 31 0 0 chr20 26733232 26733264 -45420618 + AT_rich Low_complexity Low_complexity 1 32 0 1799 184 23 0 chr20 26733304 26733609 -45420273 + AluJo SINE Alu 1 312 0 377 341 0 0 chr20 26734515 26734647 -45419235 - MIR SINE MIR -126 136 5 24 0 0 0 chr20 26735067 26735091 -45418791 + AT_rich Low_complexity Low_complexity 1 24 0 1474 168 55 52 chr20 26735557 26735594 -45418288 + AluJb SINE Alu 1 36 -276 2274 93 3 16 chr20 26735594 26735904 -45417978 - AluSq SINE Alu -7 306 1 1474 168 55 52 chr20 26735904 26736157 -45417725 + AluJb SINE Alu 36 292 -20 1147 196 38 0 chr20 26736176 26736385 -45417497 - MER20 DNA MER1_type -2 217 1 25 0 0 0 chr20 26736511 26736536 -45417346 + AT_rich Low_complexity Low_complexity 1 25 0 1414 118 5 9 chr20 26736536 26736756 -45417126 + L1MA6 LINE L1 6082 6300 0 661 251 240 3 chr20 26737740 26738023 -45415859 + LTR16C LTR ERVL 142 491 0 1052 224 32 16 chr20 26738754 26739000 -45414882 + L1ME1 LINE L1 5913 6162 -4 227 325 13 26 chr20 26739239 26739316 -45414566 + MIR SINE MIR 20 95 -167 352 238 89 0 chr20 26739318 26739419 -45414463 - MLT1J LTR MaLR -333 178 69 268 290 122 30 chr20 26742003 26742134 -45411748 - L2 LINE L2 0 3313 3171 720 297 181 41 chr20 26742274 26742753 -45411129 - L2 LINE L2 -337 2977 2566 2360 125 57 40 chr20 26742753 26743178 -45410704 + MSTB1 LTR MaLR 1 432 0 720 297 181 41 chr20 26743178 26743858 -45410024 - L2 LINE L2 -748 2566 1656 214 363 27 41 chr20 26744711 26744857 -45409025 + MIR SINE MIR 119 262 0 347 237 13 118 chr20 26745922 26746074 -45407808 + Charlie8 DNA MER1_type 38 173 -2244 2711 248 32 17 chr20 26746461 26747093 -45406789 - MER82 DNA MER2_type -4 649 9 225 263 12 75 chr20 26747643 26747723 -45406159 - MER91 DNA MER1_type 0 140 66 747 0 0 0 chr20 26748152 26748235 -45405647 + (GGAA)n Simple_repeat Simple_repeat 4 86 0 192 354 37 0 chr20 26748489 26748571 -45405311 + MIR SINE MIR 107 191 -71 1220 179 115 8 chr20 26748782 26749016 -45404866 + AluJo SINE Alu 1 259 -53 755 292 140 22 chr20 26750175 26750682 -45403200 + L1MC4a LINE L1 5381 5947 -1861 1783 159 51 0 chr20 26751440 26751736 -45402146 + AluJo SINE Alu 1 311 -1 30 45 0 0 chr20 26751831 26751875 -45402007 + AT_rich Low_complexity Low_complexity 1 44 0 272 272 35 18 chr20 26751875 26752044 -45401838 + (TA)n Simple_repeat Simple_repeat 2 173 0 994 261 81 22 chr20 26752865 26753077 -45400805 + MER20B DNA MER1_type 364 607 -176 333 0 0 0 chr20 26753077 26753114 -45400768 + (TG)n Simple_repeat Simple_repeat 2 38 0 994 261 81 22 chr20 26753114 26753258 -45400624 + MER20B DNA MER1_type 607 741 -42 353 233 14 0 chr20 26753336 26753409 -45400473 - MER5B DNA MER1_type 0 178 105 424 215 21 11 chr20 26753516 26753609 -45400273 - MER5B DNA MER1_type -83 95 2 505 296 15 0 chr20 26753654 26753789 -45400093 + MER5A DNA MER1_type 1 137 -52 1966 135 0 30 chr20 26755036 26755340 -45398542 + AluSx SINE Alu 1 295 -17 286 262 0 29 chr20 26755351 26755454 -45398428 + (TATATG)n Simple_repeat Simple_repeat 3 102 0 25 0 0 0 chr20 26755646 26755671 -45398211 + AT_rich Low_complexity Low_complexity 1 25 0 266 288 75 12 chr20 26756284 26756364 -45397518 + L2 LINE L2 3229 3313 0 393 341 82 19 chr20 26756397 26756605 -45397277 - MIR SINE MIR -16 246 26 3084 278 113 25 chr20 26756825 26758548 -45395334 + L1ME3A LINE L1 3543 5424 -746 501 229 8 8 chr20 26758557 26758675 -45395207 + L1ME3A LINE L1 5711 5828 -342 1405 102 6 0 chr20 26758696 26758873 -45395009 - AluSx SINE Alu -134 178 1 310 227 0 0 chr20 26758989 26759055 -45394827 - MIR SINE MIR -34 228 163 2234 237 49 28 chr20 26759066 26759737 -45394145 + MER97b DNA MER1_type? 41 725 -328 633 290 88 37 chr20 26760163 26760624 -45393258 + MLT1H LTR MaLR 21 544 -5 815 30 0 0 chr20 26760640 26760739 -45393143 + AluYa5/8 SINE Alu 213 311 0 335 240 182 47 chr20 26762741 26762933 -45390949 + MER112 DNA MER1_type 1 218 -42 543 294 76 17 chr20 26763393 26763631 -45390251 + MIR SINE MIR 4 255 -7 234 0 0 0 chr20 26764375 26764401 -45389481 + (TG)n Simple_repeat Simple_repeat 2 27 0 254 368 75 26 chr20 26764947 26765213 -45388669 + L2 LINE L2 2563 2841 -473 7730 206 23 100 chr20 26765385 26765879 -45388003 + L1M4 LINE L1 2516 3046 -3100 1943 145 0 21 chr20 26765879 26766196 -45387686 + AluSx SINE Alu 1 311 0 7730 206 23 100 chr20 26766196 26767118 -45386764 + L1M4 LINE L1 3046 4037 -2109 480 120 40 10 chr20 26767118 26767218 -45386664 + Charlie5 DNA MER1_type 2428 2530 -82 2326 12 0 0 chr20 26767224 26767477 -45386405 + AluYa5 SINE Alu 45 297 -14 7730 206 23 100 chr20 26767477 26768093 -45385789 + L1M4 LINE L1 4042 4411 -1735 2210 123 3 0 chr20 26768093 26768402 -45385480 + AluSx SINE Alu 1 310 -2 7730 206 23 100 chr20 26768402 26768938 -45384944 + L1M4 LINE L1 4411 4987 -1159 773 234 5 5 chr20 26768944 26769136 -45384746 + L1MB4 LINE L1 6 197 -6666 * 9220 192 42 23 chr20 26769133 26772068 -45381814 + L1MB4 LINE L1 1392 4377 -2485 3387 133 72 0 chr20 26772068 26772585 -45381297 + MER41C LTR ERV1 1 554 0 7049 74 26 0 chr20 26772672 26773576 -45380306 + MER41C-int LTR ERV1 3 930 -6826 * 12500 83 28 2 chr20 26773568 26775218 -45378664 + MER41C-int LTR ERV1 1363 3055 -4701 15775 67 14 1 chr20 26775218 26777190 -45376692 + MER41C-int LTR ERV1 4399 6395 -1361 3853 84 39 13 chr20 26777186 26777721 -45376161 + MER41C-int LTR ERV1 7208 7756 0 * 3416 131 65 0 chr20 26777721 26778241 -45375641 + MER41C LTR ERV1 1 554 0 8221 184 25 20 chr20 26778410 26780219 -45373663 + L1MB4 LINE L1 4372 6202 -694 288 0 0 0 chr20 26780219 26780251 -45373631 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 8221 184 25 20 chr20 26780251 26780950 -45372932 + L1MB4 LINE L1 6202 6896 0 22 0 0 0 chr20 26781309 26781331 -45372551 + AT_rich Low_complexity Low_complexity 1 22 0 27 29 0 0 chr20 26781349 26781383 -45372499 + AT_rich Low_complexity Low_complexity 1 34 0 230 293 108 36 chr20 26781404 26781626 -45372256 + L1ME LINE L1 5527 5764 -357 186 200 0 0 chr20 26782125 26782165 -45371717 - L2 LINE L2 -4 3309 3270 225 241 127 0 chr20 26782250 26782329 -45371553 - MIR SINE MIR -87 175 87 28 86 0 0 chr20 26783212 26783282 -45370600 + AT_rich Low_complexity Low_complexity 1 70 0 2270 287 132 36 chr20 26783336 26784819 -45369063 - L2 LINE L2 -251 3062 1429 1796 153 39 11 chr20 26784819 26785100 -45368782 - AluJo SINE Alu -23 289 1 2270 287 132 36 chr20 26785100 26785192 -45368690 - L2 LINE L2 -1884 1429 1347 1784 168 73 68 chr20 26785192 26785710 -45368172 - Charlie1b DNA MER1_type -2 521 1 192 271 0 21 chr20 26785736 26785784 -45368098 - MIR SINE MIR -135 73 27 2175 104 16 13 chr20 26787190 26787498 -45366384 + AluSx SINE Alu 1 309 -3 521 321 113 0 chr20 26787759 26787971 -45365911 - MIR SINE MIR -16 246 11 334 290 80 35 chr20 26788004 26788338 -45365544 - L1ME LINE L1 -297 5824 5417 2490 90 0 0 chr20 26788732 26789043 -45364839 + AluY SINE Alu 1 311 0 801 284 107 12 chr20 26789616 26790017 -45363865 - LTR16A LTR ERVL -11 439 1 375 305 96 40 chr20 26790291 26790468 -45363414 - MER45C DNA AcHobo -441 512 326 694 259 81 25 chr20 26790540 26790776 -45363106 - MER45C DNA AcHobo -651 302 54 2502 68 0 0 chr20 26791340 26791649 -45362233 + AluY SINE Alu 1 309 -2 431 234 0 4 chr20 26791895 26792129 -45361753 + (CA)n Simple_repeat Simple_repeat 1 232 0 1458 196 21 11 chr20 26792220 26792505 -45361377 - AluJb SINE Alu -18 294 7 1417 178 30 0 chr20 26793450 26793686 -45360196 - AluJb SINE Alu -12 300 58 207 336 39 16 chr20 26793694 26793822 -45360060 + MIR SINE MIR 65 195 -67 2422 229 48 12 chr20 26794595 26795157 -45358725 - MLT1G LTR MaLR -1 589 8 2097 133 0 3 chr20 26795757 26796057 -45357825 + AluSg SINE Alu 1 299 -11 1579 238 90 0 chr20 26796135 26796547 -45357335 + MLT1G LTR MaLR 125 573 -17 324 48 0 0 chr20 26796902 26796944 -45356938 + (CA)n Simple_repeat Simple_repeat 1 42 0 798 191 27 33 chr20 26798216 26798399 -45355483 - MIR SINE MIR -60 202 21 721 177 8 8 chr20 26798658 26798788 -45355094 + FLAM_C SINE Alu 2 131 -2 492 184 60 1 chr20 26798845 26798972 -45354910 + L1ME1 LINE L1 6027 6162 -2 244 233 78 60 chr20 26799767 26799883 -45353999 - L1MC4 LINE L1 -1 8041 7924 1931 198 3 27 chr20 26799951 26800319 -45353563 - MLT1A1 LTR MaLR -1 364 6 757 245 10 25 chr20 26800410 26800614 -45353268 - L1ME2 LINE L1 -20 6144 5944 322 229 16 0 chr20 26800678 26800739 -45353143 + Tigger3(Golem) DNA MER2_type 1 62 -2967 733 81 0 0 chr20 26800914 26801013 -45352869 + AluY SINE Alu 211 309 -2 242 178 14 0 chr20 26801123 26801138 -45352744 + A-rich Low_complexity Low_complexity 1 14 -60 2232 128 0 3 chr20 26801138 26801451 -45352431 + AluSx SINE Alu 1 312 0 242 178 14 0 chr20 26801451 26801508 -45352374 + A-rich Low_complexity Low_complexity 14 74 0 236 293 41 61 chr20 26801699 26801846 -45352036 - MIR SINE MIR -67 195 52 296 282 27 27 chr20 26805170 26805280 -45348602 - MIR SINE MIR -80 128 19 547 297 51 25 chr20 26805891 26806127 -45347755 + MIR SINE MIR 6 247 -15 21 36 0 0 chr20 26806620 26806648 -45347234 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr20 26807477 26807499 -45346383 + AT_rich Low_complexity Low_complexity 1 22 0 1985 111 93 0 chr20 26807774 26808044 -45345838 - AluSx SINE Alu -17 295 1 1136 240 37 58 chr20 26808640 26809124 -45344758 - L1MC5 LINE L1 -178 7783 7310 880 180 0 55 chr20 26809218 26809401 -45344481 + FRAM SINE Alu 2 174 -2 675 281 138 30 chr20 26810100 26810763 -45343119 + L1MC4a LINE L1 4957 5681 -748 465 274 68 17 chr20 26810784 26811018 -45342864 + L1MC4a LINE L1 5763 6008 -1800 232 257 46 64 chr20 26811023 26811132 -45342750 + L1MC4a LINE L1 6069 6175 -1633 2072 121 24 0 chr20 26811140 26811430 -45342452 + AluSx SINE Alu 1 297 -15 491 321 36 0 chr20 26813709 26813905 -45339977 - MIR SINE MIR -1 261 59 562 265 185 12 chr20 26815348 26815673 -45338209 - LTR16A LTR ERVL -47 403 23 2303 92 3 0 chr20 26816632 26816924 -45336958 + AluSp SINE Alu 1 293 -20 1757 161 39 0 chr20 26816969 26817249 -45336633 + AluJb SINE Alu 1 291 -21 297 0 0 0 chr20 26817597 26817630 -45336252 + (CA)n Simple_repeat Simple_repeat 2 34 0 768 229 0 6 chr20 26819809 26819984 -45333898 + MER5B DNA MER1_type 5 178 0 306 73 0 0 chr20 26820340 26820381 -45333501 + (TATG)n Simple_repeat Simple_repeat 2 42 0 396 0 0 0 chr20 26826276 26826320 -45327562 + (TG)n Simple_repeat Simple_repeat 2 45 0 24 0 0 0 chr20 26832409 26832433 -45321449 + AT_rich Low_complexity Low_complexity 1 24 0 23 97 0 0 chr20 26833044 26833116 -45320766 + AT_rich Low_complexity Low_complexity 1 72 0 261 0 0 0 chr20 26834216 26834245 -45319637 + (TG)n Simple_repeat Simple_repeat 2 30 0 217 233 12 12 chr20 26835737 26835823 -45318059 + CT-rich Low_complexity Low_complexity 1 86 0 183 42 0 0 chr20 26836613 26836637 -45317245 + (CAA)n Simple_repeat Simple_repeat 2 25 0 22 0 0 0 chr20 26837340 26837362 -45316520 + AT_rich Low_complexity Low_complexity 1 22 0 243 61 0 0 chr20 26839824 26839857 -45314025 + (T)n Simple_repeat Simple_repeat 1 33 0 183 156 0 0 chr20 26840765 26840797 -45313085 + (TTG)n Simple_repeat Simple_repeat 2 33 0 1898 146 3 47 chr20 26840986 26841308 -45312574 + AluJo SINE Alu 1 308 -4 493 263 75 28 chr20 26841743 26841956 -45311926 + MIR SINE MIR 40 262 0 299 96 84 0 chr20 26842041 26842124 -45311758 + (TA)n Simple_repeat Simple_repeat 1 90 0 356 211 11 42 chr20 26842124 26842219 -45311663 + L1MC4 LINE L1 6612 6703 -1339 568 110 82 0 chr20 26842232 26842539 -45311343 + (TA)n Simple_repeat Simple_repeat 1 332 0 1865 149 0 43 chr20 26842557 26842858 -45311024 - AluJo SINE Alu -24 288 1 507 300 109 22 chr20 26845101 26845331 -45308551 - MIR SINE MIR 0 262 13 1547 247 58 41 chr20 26845523 26846061 -45307821 - MLT1H LTR MaLR 0 549 3 25 0 0 0 chr20 26846461 26846486 -45307396 + AT_rich Low_complexity Low_complexity 1 25 0 22 0 0 0 chr20 26846789 26846811 -45307071 + AT_rich Low_complexity Low_complexity 1 22 0 2519 128 18 54 chr20 26847043 26847487 -45306395 - MSTC LTR MaLR 0 428 1 336 324 36 7 chr20 26847546 26847685 -45306197 + MIR SINE MIR 2 144 -118 748 171 171 0 chr20 26848091 26848243 -45305639 + MER45A DNA AcHobo 1 178 0 2483 63 0 7 chr20 26848882 26849183 -45304699 - AluY SINE Alu -12 299 1 863 184 101 75 chr20 26849371 26849649 -45304233 + LTR12 LTR ERV1 1 285 -429 286 200 0 40 chr20 26849650 26849725 -45304157 + LTR30 LTR ERV1 553 624 -98 655 150 25 33 chr20 26849725 26849845 -45304037 + LTR12 LTR ERV1 362 480 -234 287 241 230 33 chr20 26849848 26850118 -45303764 - LTR16A LTR ERVL -66 384 62 1078 224 36 0 chr20 26851285 26851508 -45302374 + L1PA16 LINE L1 5912 6142 -24 1250 216 77 26 chr20 26852063 26852414 -45301468 + MLT1C LTR MaLR 9 377 -90 220 330 52 35 chr20 26852543 26852658 -45301224 + L2 LINE L2 3195 3311 -2 240 86 0 0 chr20 26853185 26853220 -45300662 + (CA)n Simple_repeat Simple_repeat 1 35 0 1879 223 44 52 chr20 26853270 26853848 -45300034 - L1MC4 LINE L1 0 7854 7307 1894 176 19 80 chr20 26853848 26854025 -45299857 + MLT1B LTR MaLR 1 187 -203 2025 150 7 3 chr20 26854025 26854331 -45299551 + AluSx SINE Alu 2 308 -4 1894 176 19 80 chr20 26854331 26854568 -45299314 + MLT1B LTR MaLR 187 390 0 1879 223 44 52 chr20 26854568 26854748 -45299134 - L1MC4 LINE L1 -547 7307 7127 15598 168 59 12 chr20 26854793 26860725 -45293157 - L1PB1 LINE L1 -2 6865 637 1030 175 31 0 chr20 26860728 26860922 -45292960 - L1PB1 LINE L1 -6663 200 1 254 153 28 111 chr20 26860928 26861000 -45292882 - L1MC4a LINE L1 -673 7135 7070 * 1494 245 118 41 chr20 26860987 26861747 -45292135 - L1ME3A LINE L1 -5 6559 5741 1853 143 7 24 chr20 26861811 26862098 -45291784 - AluJb SINE Alu -30 282 1 231 204 0 0 chr20 26862098 26862152 -45291730 - L1ME3A LINE L1 -2453 5726 5673 651 254 48 96 chr20 26862155 26862674 -45291208 - L1ME3A LINE L1 -4276 2445 1952 678 257 95 70 chr20 26864032 26864168 -45289714 - L1ME3A LINE L1 -4619 1921 1790 1958 132 102 9 chr20 26864168 26864501 -45289381 - THE1B LTR MaLR 0 364 1 678 257 95 70 chr20 26864501 26864847 -45289035 - L1ME3A LINE L1 -4750 1790 1427 2582 63 0 3 chr20 26864876 26865179 -45288703 + AluY SINE Alu 3 304 -7 574 244 95 18 chr20 26865205 26865426 -45288456 - L1M4 LINE L1 -1410 4736 4499 3670 121 21 68 chr20 26865426 26865714 -45288168 - Tigger3b DNA MER2_type -1798 1230 930 2164 136 62 45 chr20 26865714 26866133 -45287749 - MSTB LTR MaLR 0 426 1 3670 121 21 68 chr20 26866133 26866523 -45287359 - Tigger3b DNA MER2_type -2098 930 584 33207 73 5 5 chr20 26866525 26871925 -45281957 - L1PA6 LINE L1 -14 6140 753 2499 148 78 24 chr20 26871926 26872386 -45281496 - Tigger3b DNA MER2_type -745 486 2 1273 279 98 26 chr20 26872387 26873225 -45280657 - L1M4 LINE L1 -1645 4501 3604 621 165 0 29 chr20 26873228 26873331 -45280551 - Tigger3(Golem) DNA MER2_type -2929 100 1 238 228 51 0 chr20 26873331 26873410 -45280472 - L1M4 LINE L1 -1645 4999 4917 501 96 70 185 chr20 26873414 26873571 -45280311 + Tigger3b DNA MER2_type 238 376 -855 1059 267 67 46 chr20 26873703 26874329 -45279553 - L1M4 LINE L1 -2938 3706 3068 505 275 145 40 chr20 26874341 26874941 -45278941 - L1M4 LINE L1 -4850 1692 1030 1830 141 0 28 chr20 26875531 26875821 -45278061 + AluJb SINE Alu 1 282 -30 279 330 94 0 chr20 26875853 26875959 -45277923 - MIR SINE MIR -63 145 30 195 42 0 0 chr20 26876476 26876500 -45277382 + (A)n Simple_repeat Simple_repeat 1 24 0 2617 128 27 52 chr20 26877338 26877783 -45276099 - Tigger2a DNA MER2_type 0 434 1 1145 243 10 21 chr20 26879734 26880022 -45273860 + MLT1F LTR MaLR 8 292 -250 336 271 31 0 chr20 26880024 26880120 -45273762 + MIR SINE MIR 113 211 -51 432 310 27 16 chr20 26880126 26880313 -45273569 - L1ME4a LINE L1 -285 5836 5648 1373 214 49 83 chr20 26881386 26881771 -45272111 - L1ME3 LINE L1 -1 6161 5791 1920 117 9 77 chr20 26881771 26882097 -45271785 + AluSc SINE Alu 1 304 -5 1373 214 49 83 chr20 26882097 26882142 -45271740 - L1ME3 LINE L1 -371 5791 5746 1284 211 5 0 chr20 26883612 26883835 -45270047 + MER58A DNA MER1_type 1 224 0 221 378 58 16 chr20 26884027 26884215 -45269667 - L2 LINE L2 -222 3050 2855 2699 210 30 16 chr20 26884314 26884871 -45269011 + MLT1F1 LTR MaLR 1 565 -2 265 307 89 0 chr20 26885226 26885327 -45268555 - MIR SINE MIR -118 144 35 197 65 32 0 chr20 26885685 26885716 -45268166 + (CA)n Simple_repeat Simple_repeat 2 33 0 2486 100 0 3 chr20 26885841 26886172 -45267710 - L1PB1 LINE L1 0 6151 5822 662 154 0 0 chr20 26887208 26887299 -45266583 + AluSg/x SINE Alu 190 280 -30 183 80 0 0 chr20 26887307 26887332 -45266550 + (TATATG)n Simple_repeat Simple_repeat 2 26 0 247 211 19 0 chr20 26887490 26887542 -45266340 + MIR SINE MIR 108 160 -102 396 294 114 43 chr20 26888088 26888272 -45265610 - MIR3 SINE MIR -7 201 5 532 141 7 74 chr20 26889020 26889155 -45264727 + L1MB2 LINE L1 6044 6169 -2 813 229 11 90 chr20 26889165 26889432 -45264450 + MLT1J LTR MaLR 208 453 -58 651 261 103 0 chr20 26889571 26889736 -45264146 + MER5A DNA MER1_type 7 188 -1 491 321 14 24 chr20 26889766 26889978 -45263904 + MIR SINE MIR 4 213 -49 686 328 38 0 chr20 26890195 26890433 -45263449 - MIR SINE MIR -1 261 15 705 259 149 19 chr20 26890567 26890883 -45262999 - LTR16C LTR ERVL 0 491 135 21 0 0 0 chr20 26890894 26890915 -45262967 + AT_rich Low_complexity Low_complexity 1 21 0 655 242 39 39 chr20 26890962 26891144 -45262738 - MER5A DNA MER1_type 0 189 8 180 0 0 0 chr20 26891431 26891451 -45262431 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 31 0 0 0 chr20 26892102 26892133 -45261749 + AT_rich Low_complexity Low_complexity 1 31 0 4430 118 22 6 chr20 26892957 26893637 -45260245 - L1MA5A LINE L1 -23 6274 5584 1608 231 79 25 chr20 26894140 26894620 -45259262 + L1ME1 LINE L1 5596 6101 -65 21 0 0 0 chr20 26894622 26894643 -45259239 + AT_rich Low_complexity Low_complexity 1 21 0 208 343 180 13 chr20 26894998 26895237 -45258645 - L3 LINE CR1 -659 918 640 302 321 68 34 chr20 26895280 26895489 -45258393 + L1ME2 LINE L1 5471 5692 -429 2337 139 16 22 chr20 26895489 26895855 -45258027 - THE1B LTR MaLR 0 364 1 302 321 68 34 chr20 26895855 26895910 -45257972 + L1ME2 LINE L1 5692 5744 -377 643 274 146 5 chr20 26895939 26896158 -45257724 - MIR SINE MIR -1 261 12 225 169 22 45 chr20 26896545 26896634 -45257248 + (TTATA)n Simple_repeat Simple_repeat 3 89 0 1658 109 0 0 chr20 26897040 26897261 -45256621 + L1PA8 LINE L1 5950 6170 -2 571 325 126 32 chr20 26898249 26899032 -45254850 - L2 LINE L2 -4 3309 2446 1493 231 59 0 chr20 26899070 26899476 -45254406 + L1ME2 LINE L1 5726 6155 -9 982 256 108 23 chr20 26900764 26901201 -45252681 + LTR16C LTR ERVL 9 482 -9 1386 224 58 3 chr20 26902719 26903063 -45250819 + MLT1A1 LTR MaLR 2 364 -1 262 233 30 60 chr20 26903251 26903384 -45250498 + LTR16C LTR ERVL 352 480 -11 272 281 0 0 chr20 26904288 26904352 -45249530 - L2 LINE L2 -3 3310 3247 1768 184 106 16 chr20 26905811 26906137 -45247745 + MLT2D LTR ERVL 3 369 -45 417 39 0 0 chr20 26906137 26906188 -45247694 + (TC)n Simple_repeat Simple_repeat 2 52 0 1768 184 106 16 chr20 26906188 26906237 -45247645 + MLT2D LTR ERVL 369 412 -2 303 345 8 0 chr20 26907113 26907232 -45246650 + L1ME LINE L1 5599 5718 -452 2098 143 3 0 chr20 26907874 26908175 -45245707 + AluJb SINE Alu 1 302 -10 230 244 12 0 chr20 26908486 26908568 -45245314 + (CA)n Simple_repeat Simple_repeat 2 84 0 300 137 0 0 chr20 26908625 26908676 -45245206 + (CA)n Simple_repeat Simple_repeat 2 52 0 348 324 38 43 chr20 26909139 26909324 -45244558 - MLT1I LTR MaLR -124 285 102 3802 53 0 5 chr20 26910096 26910545 -45243337 - L1PA8 LINE L1 -6 6166 5720 928 57 0 0 chr20 26910545 26910667 -45243215 + L1P LINE L1 5099 5220 -926 350 253 47 26 chr20 26910674 26910795 -45243087 - L1MC/D LINE L1 -486 5635 5533 1414 188 7 52 chr20 26912221 26912530 -45241352 - LTR1 LTR ERV1 -490 295 1 183 346 0 0 chr20 26913373 26913425 -45240457 - MIR3 SINE MIR -14 194 143 887 143 0 11 chr20 26914004 26914186 -45239696 + (CA)n Simple_repeat Simple_repeat 1 180 0 203 308 0 0 chr20 26914308 26914360 -45239522 - MIR3 SINE MIR -14 194 143 1298 232 63 36 chr20 26914751 26915113 -45238769 - MLT1A2 LTR MaLR 0 374 3 422 276 113 64 chr20 26915275 26915699 -45238183 + L2 LINE L2 2741 3217 -96 2143 129 47 19 chr20 26915699 26916064 -45237818 - THE1C LTR MaLR 0 375 1 422 276 113 64 chr20 26916064 26916166 -45237716 + L2 LINE L2 3217 3313 0 1034 209 164 0 chr20 26916920 26917188 -45236694 + LTR16C LTR ERVL 180 491 0 900 175 42 21 chr20 26917408 26917621 -45236261 - AluJb SINE Alu 0 312 107 966 216 62 0 chr20 26918147 26918355 -45235527 - MIR SINE MIR -40 222 2 203 56 56 0 chr20 26919325 26919361 -45234521 + T-rich Low_complexity Low_complexity 3 40 0 438 266 76 43 chr20 26919543 26919727 -45234155 + MIR SINE MIR 20 209 -53 224 246 200 0 chr20 26919795 26919860 -45234022 + L2 LINE L2 3147 3224 -48 479 259 38 15 chr20 26920694 26920825 -45233057 + MLT1H LTR MaLR 97 230 -319 560 319 65 13 chr20 26922070 26922299 -45231583 - MIR SINE MIR -10 252 12 313 218 57 21 chr20 26922580 26922798 -45231084 + L1MC5 LINE L1 7638 7915 -46 2407 85 0 13 chr20 26923899 26924216 -45229666 + AluSq SINE Alu 1 313 0 3090 116 53 6 chr20 26924803 26925291 -45228591 + L1PB3 LINE L1 5637 6148 -2 261 0 0 0 chr20 26925291 26925320 -45228562 + (TA)n Simple_repeat Simple_repeat 1 29 0 22 35 0 0 chr20 26925724 26925753 -45228129 + AT_rich Low_complexity Low_complexity 1 29 0 207 146 0 0 chr20 26926459 26926500 -45227382 + (CA)n Simple_repeat Simple_repeat 2 42 0 2181 70 0 7 chr20 26926950 26927221 -45226661 + AluY SINE Alu 35 303 -8 962 296 36 24 chr20 26927261 26927797 -45226085 + L1MEc LINE L1 2166 2662 -3553 476 314 58 0 chr20 26928002 26928327 -45225555 + L1MEc LINE L1 3027 3370 -2845 708 311 98 30 chr20 26928463 26929406 -45224476 + L1MEc LINE L1 3579 4585 -1630 305 204 19 0 chr20 26929416 26929470 -45224412 + MER69 DNA AcHobo 1 55 -2471 738 271 112 20 chr20 26929491 26929551 -45224331 - MLT1J2 LTR MaLR -118 332 279 2568 211 71 4 chr20 26929551 26930059 -45223823 - MLT1F LTR MaLR 0 542 1 738 271 112 20 chr20 26930059 26930249 -45223633 - MLT1J2 LTR MaLR -171 279 59 214 320 33 60 chr20 26930558 26930708 -45223174 - L2 LINE L2 -181 3091 2946 207 100 0 0 chr20 26931309 26931339 -45222543 + (CTTG)n Simple_repeat Simple_repeat 2 31 0 467 281 16 18 chr20 26931782 26931989 -45221893 + MIR SINE MIR 1 261 -1 279 264 285 14 chr20 26932091 26932235 -45221647 - MIR SINE MIR -60 202 20 618 201 50 25 chr20 26932757 26932916 -45220966 + MER103 DNA DNA 3 165 -1 1091 255 55 36 chr20 26933962 26934346 -45219536 - LTR16C LTR ERVL -2 489 99 185 140 380 0 chr20 26935504 26935554 -45218328 + MIR SINE MIR 122 190 -72 572 272 115 39 chr20 26935672 26936062 -45217820 - MLT2F LTR ERVL -5 658 239 308 244 174 26 chr20 26936099 26936214 -45217668 - MLT2F LTR ERVL -531 132 1 21 36 0 0 chr20 26936991 26937019 -45216863 + AT_rich Low_complexity Low_complexity 1 28 0 5246 146 16 44 chr20 26937060 26937905 -45215977 + L1PB4 LINE L1 4712 5501 -724 2318 108 0 3 chr20 26937905 26938212 -45215670 + AluSq SINE Alu 1 306 -7 5246 146 16 44 chr20 26938212 26938911 -45214971 + L1PB4 LINE L1 5501 6218 -7 529 283 51 81 chr20 26939187 26939556 -45214326 + MLT1J LTR MaLR 3 359 -152 1880 186 0 0 chr20 26940156 26940468 -45213414 + AluJb SINE Alu 1 312 0 29 0 0 0 chr20 26940619 26940648 -45213234 + AT_rich Low_complexity Low_complexity 1 29 0 270 225 12 75 chr20 26940720 26940800 -45213082 - MIR SINE MIR -71 191 117 212 254 15 30 chr20 26940799 26940866 -45213016 - MIR SINE MIR -93 169 104 * 766 340 175 2 chr20 26940876 26941499 -45212383 - L2 LINE L2 -871 2443 1713 6817 87 30 1 chr20 26941949 26942980 -45210902 + L1PA11 LINE L1 5116 6174 0 35 0 0 0 chr20 26942980 26943015 -45210867 + AT_rich Low_complexity Low_complexity 1 35 0 1489 167 20 39 chr20 26943025 26943331 -45210551 + AluJo SINE Alu 1 300 -12 370 208 0 0 chr20 26943716 26943788 -45210094 - L1ME3A LINE L1 -52 6118 6047 332 320 164 27 chr20 26945190 26945415 -45208467 - MIR SINE MIR -6 256 1 597 188 159 12 chr20 26945600 26945770 -45208112 + MER113 DNA MER1_type? 7 201 -320 903 206 6 12 chr20 26945855 26946025 -45207857 + FRAM SINE Alu 1 168 -8 515 198 73 0 chr20 26946148 26946244 -45207638 - MER5A DNA MER1_type -77 112 10 334 257 175 29 chr20 26946418 26946589 -45207293 + L2 LINE L2 3118 3313 0 440 275 25 31 chr20 26947289 26947449 -45206433 + LTR16A LTR ERVL 114 272 -178 2346 209 45 4 chr20 26947452 26948396 -45205486 + MER45B DNA AcHobo 1 1026 -14 3665 170 14 2 chr20 26948400 26948994 -45204888 - MER6A DNA MER2_type -4 601 1 448 275 66 22 chr20 26949001 26949088 -45204794 + LTR16A LTR ERVL 261 343 -107 360 43 0 0 chr20 26949088 26949134 -45204748 + (TTA)n Simple_repeat Simple_repeat 2 47 0 448 275 66 22 chr20 26949134 26949228 -45204654 + LTR16A LTR ERVL 343 450 0 318 165 25 63 chr20 26950083 26950162 -45203720 - L2 LINE L2 -25 3247 3172 320 271 53 15 chr20 26950648 26950781 -45203101 + L1ME4a LINE L1 5969 6106 -15 323 258 144 12 chr20 26950959 26951126 -45202756 - MLT1L LTR MaLR -4 611 423 678 224 39 34 chr20 26951322 26951501 -45202381 + MER3 DNA MER1_type 1 180 -29 244 209 15 90 chr20 26951570 26951637 -45202245 - MLT1L LTR MaLR -550 65 4 1436 214 3 27 chr20 26952252 26952547 -45201335 + AluJo SINE Alu 1 288 -24 354 198 0 27 chr20 26952564 26952675 -45201207 + (TA)n Simple_repeat Simple_repeat 2 109 0 401 366 44 0 chr20 26952697 26952902 -45200980 - LTR16A LTR ERVL -78 372 159 235 237 0 0 chr20 26953212 26953271 -45200611 + T-rich Low_complexity Low_complexity 1 59 0 28244 32 2 2 chr20 26953440 26957560 -45196322 - L1PA3 LINE L1 0 6155 2035 188 354 32 44 chr20 26957812 26957970 -45195912 - MIR SINE MIR -43 219 64 276 369 68 19 chr20 26958149 26958355 -45195527 - MIR SINE MIR -19 243 28 190 132 13 66 chr20 26958375 26958451 -45195431 + CT-rich Low_complexity Low_complexity 5 76 0 1116 185 5 5 chr20 26958516 26958711 -45195171 - AluSx SINE Alu -116 196 2 394 250 150 14 chr20 26958793 26958933 -45194949 - L2 LINE L2 -667 2647 2489 1672 167 54 0 chr20 26959002 26959278 -45194604 + AluJb SINE Alu 1 291 -21 731 225 41 6 chr20 26959281 26959450 -45194432 + HAL1 LINE L1 1530 1704 -803 21 43 0 22 chr20 26959902 26959930 -45193952 + AT_rich Low_complexity Low_complexity 1 29 -16 1687 154 39 0 chr20 26959930 26960209 -45193673 - AluJb SINE Alu -22 290 1 21 43 0 22 chr20 26960209 26960226 -45193656 + AT_rich Low_complexity Low_complexity 29 45 0 289 301 155 28 chr20 26960260 26960473 -45193409 - MIR SINE MIR -18 244 5 * 558 252 82 25 chr20 26960410 26960569 -45193313 + MIR SINE MIR 16 183 -79 184 222 0 28 chr20 26960566 26960602 -45193280 - MIR SINE MIR -194 68 34 * 1007 245 46 10 chr20 26960730 26961154 -45192728 + L1ME LINE L1 5060 5498 -664 305 244 37 0 chr20 26961158 26961240 -45192642 + L1ME LINE L1 5459 5543 -623 2280 113 0 0 chr20 26961726 26962035 -45191847 - AluSc SINE Alu 0 309 1 1092 287 64 12 chr20 26962200 26962604 -45191278 - LTR16B LTR ERVL -5 459 35 247 254 36 0 chr20 26962673 26962755 -45191127 + GA-rich Low_complexity Low_complexity 4 143 0 1135 187 35 98 chr20 26962852 26963167 -45190715 - MER2 DNA MER2_type 0 345 51 252 279 33 0 chr20 26963206 26963267 -45190615 - MIR SINE MIR 0 262 200 5641 89 23 0 chr20 26963318 26964093 -45189789 + L1PA13 LINE L1 5370 6162 -1 268 185 93 0 chr20 26964099 26964153 -45189729 - L2 LINE L2 -4 3309 3251 233 363 0 0 chr20 26964173 26964253 -45189629 + MIR SINE MIR 34 113 -95 270 336 84 28 chr20 26964324 26964467 -45189415 + L2 LINE L2 3122 3272 0 1052 249 75 43 chr20 26965279 26965653 -45188229 - LTR16C LTR ERVL 0 491 106 236 229 0 0 chr20 26966939 26966987 -45186895 + MLT1I LTR MaLR 98 145 -264 555 287 55 59 chr20 26967155 26967409 -45186473 - MIR SINE MIR 0 262 10 260 154 0 0 chr20 26967575 26967614 -45186268 + MIR SINE MIR 106 144 -118 29095 34 15 1 chr20 26969667 26975695 -45178187 + L1PA2 LINE L1 2 6151 -4 864 253 93 21 chr20 26976023 26976312 -45177570 + Charlie7 DNA MER1_type 188 497 -2115 236 238 0 32 chr20 26976409 26976472 -45177410 + Charlie7 DNA MER1_type 664 724 -1888 1048 252 162 56 chr20 26976644 26977088 -45176794 - LTR16C LTR ERVL 0 491 1 312 302 62 0 chr20 26977296 26977392 -45176490 - L2 LINE L2 -17 3296 3195 786 280 41 25 chr20 26977437 26977841 -45176041 - MLT1H LTR MaLR -11 398 23 274 206 137 20 chr20 26978131 26978233 -45175649 + MLT1K LTR MaLR 329 442 -146 3439 210 81 23 chr20 26979175 26980474 -45173408 + L1ME1 LINE L1 4786 6161 -5 318 296 0 0 chr20 26980634 26980705 -45173177 + MIR3 SINE MIR 86 156 -52 635 286 56 8 chr20 26981529 26981781 -45172101 - LTR16C LTR ERVL 0 491 228 1113 142 0 0 chr20 26982247 26982409 -45171473 + AluSg/x SINE Alu 131 292 -20 200 333 58 8 chr20 26982628 26982748 -45171134 - L2 LINE L2 -221 3051 2926 701 280 41 45 chr20 26982849 26983163 -45170719 - MER115 DNA AcHobo -25 668 356 524 322 88 31 chr20 26983237 26983464 -45170418 - MER115 DNA AcHobo -450 243 4 2297 105 0 0 chr20 26983481 26983775 -45170107 - AluSx SINE Alu -10 302 9 2880 112 49 11 chr20 26983840 26984287 -45169595 + L1MA4A LINE L1 5835 6298 -5 30 27 0 0 chr20 26984305 26984342 -45169540 + AT_rich Low_complexity Low_complexity 1 37 0 185 200 20 80 chr20 26984366 26984416 -45169466 + L2 LINE L2 3190 3236 -36 338 325 75 6 chr20 26984470 26984630 -45169252 - MIR SINE MIR -70 192 22 1649 163 7 17 chr20 26986124 26986419 -45167463 + AluJo SINE Alu 5 296 -16 2043 153 37 59 chr20 26986419 26986823 -45167059 + MER57A LTR ERV1 9 403 0 199 213 0 21 chr20 26986860 26986907 -45166975 + L2 LINE L2 3264 3309 -4 1990 143 3 7 chr20 26988632 26988939 -45164943 - AluSc SINE Alu -2 307 2 1386 279 72 64 chr20 26989143 26989702 -45164180 - MLT1G1 LTR MaLR 0 595 33 22 0 0 0 chr20 26989820 26989842 -45164040 + AT_rich Low_complexity Low_complexity 1 22 0 840 240 111 49 chr20 26989962 26990250 -45163632 - LTR16C LTR ERVL 0 491 186 1671 143 215 41 chr20 26990656 26990977 -45162905 + MSTB LTR MaLR 1 393 -33 2474 71 3 0 chr20 26990977 26991286 -45162596 - AluY SINE Alu -1 310 1 1671 143 215 41 chr20 26991286 26991327 -45162555 + MSTB LTR MaLR 393 426 0 2204 153 94 24 chr20 26991859 26992285 -45161597 + L1MB1 LINE L1 5465 5920 -392 1306 197 3 2 chr20 26992285 26992594 -45161288 - MLT1A1 LTR MaLR 0 365 8 1202 189 21 4 chr20 26992606 26992839 -45161043 + L1MB1 LINE L1 5919 6155 -13 43212 37 21 1 chr20 26992863 26998893 -45154989 - L1PA2 LINE L1 0 6155 1 884 216 11 26 chr20 26998894 26999084 -45154798 + L1MA10 LINE L1 6146 6332 -2 236 242 143 11 chr20 26999296 26999387 -45154495 + MLT1H LTR MaLR 345 447 -102 2702 126 27 50 chr20 26999891 27000329 -45153553 + MSTA LTR MaLR 1 428 0 200 180 40 0 chr20 27000495 27000545 -45153337 + (TA)n Simple_repeat Simple_repeat 1 52 0 672 261 153 42 chr20 27000762 27001095 -45152787 + LTR33 LTR ERVL 1 370 -151 246 267 0 17 chr20 27001140 27001200 -45152682 + LTR33 LTR ERVL 463 521 0 2285 148 11 11 chr20 27001527 27001916 -45151966 + MLT1B LTR MaLR 1 616 -10 20546 188 31 10 chr20 27002607 27008673 -45145209 + L1PA15 LINE L1 1 6245 -571 2526 71 0 3 chr20 27008673 27008984 -45144898 - AluY SINE Alu -1 310 1 20546 188 31 10 chr20 27008984 27009234 -45144648 + L1PA15 LINE L1 6245 6488 -328 882 237 5 5 chr20 27010994 27011180 -45142702 - MER3 DNA MER1_type 0 209 24 251 317 39 10 chr20 27011209 27011313 -45142569 - MIR SINE MIR -50 212 106 209 315 18 18 chr20 27012499 27012610 -45141272 + CT-rich Low_complexity Low_complexity 5 115 0 4108 165 24 6 chr20 27013355 27014069 -45139813 + L1MC2 LINE L1 5470 6196 -148 2361 100 10 189 chr20 27014277 27014797 -45139085 + MLT2A2 LTR ERVL 27 453 0 246 293 92 66 chr20 27014839 27015112 -45138770 - MLT1L LTR MaLR -335 280 1 629 252 145 15 chr20 27015193 27015455 -45138427 + MER5C DNA MER1_type 29 324 0 215 293 129 35 chr20 27015455 27015568 -45138314 + L2 LINE L2 3189 3312 -1 712 173 0 14 chr20 27016645 27016832 -45137050 + AluJ SINE Alu 96 310 -2 469 154 26 0 chr20 27020689 27020767 -45133115 + MLT1B LTR MaLR 1 80 -310 1082 123 45 0 chr20 27020776 27020931 -45132951 + AluYb8 SINE Alu 133 294 -24 1628 178 49 0 chr20 27020953 27021257 -45132625 + MLT1B LTR MaLR 72 390 0 683 218 4 0 chr20 27023335 27023573 -45130309 + (CA)n Simple_repeat Simple_repeat 1 239 0 6917 78 23 3 chr20 27024508 27025592 -45128290 - L1PB1 LINE L1 -5 6146 5053 237 33 0 0 chr20 27026609 27026639 -45127243 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 38684 83 9 13 chr20 27026641 27029720 -45124162 - L1PA6 LINE L1 -11 6143 3098 2618 65 0 0 chr20 27029720 27030027 -45123855 - AluY SINE Alu -4 307 1 38684 83 9 13 chr20 27030027 27033103 -45120779 - L1PA6 LINE L1 -3056 3098 12 804 259 29 17 chr20 27033198 27033437 -45120445 - L1ME3 LINE L1 0 6162 5921 450 190 183 49 chr20 27034964 27034990 -45118892 + L2 LINE L2 3148 3169 -144 3791 142 0 2 chr20 27034990 27035518 -45118364 + MER1A DNA MER1_type 1 527 0 450 190 183 49 chr20 27035518 27035633 -45118249 + L2 LINE L2 3169 3308 -5 832 242 46 33 chr20 27035836 27036142 -45117740 + L1M4 LINE L1 3164 3473 -2673 33 0 0 0 chr20 27036593 27036626 -45117256 + AT_rich Low_complexity Low_complexity 1 33 0 1302 275 63 28 chr20 27036663 27037275 -45116607 + L2 LINE L2 2421 3063 -250 196 269 58 19 chr20 27037275 27037327 -45116555 + L2 LINE L2 3245 3298 -15 1747 168 10 16 chr20 27037417 27037727 -45116155 + AluJo SINE Alu 1 308 -4 226 250 33 0 chr20 27037743 27037803 -45116079 + Charlie8 DNA MER1_type 33 94 -2323 11752 201 31 18 chr20 27037810 27042589 -45111293 - L1MB3 LINE L1 -1 6418 1606 3447 180 8 18 chr20 27042589 27043200 -45110682 - L1MB3 LINE L1 -5759 625 21 257 282 94 8 chr20 27043202 27043227 -45110655 + Charlie8 DNA MER1_type 84 105 -2312 1414 216 3 23 chr20 27043227 27043532 -45110350 + AluJo SINE Alu 1 299 -13 257 282 94 8 chr20 27043532 27043623 -45110259 + Charlie8 DNA MER1_type 105 210 -2207 3090 201 19 13 chr20 27043808 27044424 -45109458 + MLT1E3 LTR MaLR 1 620 -4 1902 152 30 0 chr20 27044550 27044847 -45109035 + AluJb SINE Alu 1 306 -6 729 299 101 5 chr20 27046017 27046452 -45107430 - LTR16C LTR ERVL -10 481 5 911 263 45 45 chr20 27046563 27046920 -45106962 - L1ME3 LINE L1 -1 6161 5805 428 302 71 14 chr20 27047165 27047330 -45106552 + MIR3 SINE MIR 10 186 -22 384 302 163 14 chr20 27047910 27048125 -45105757 + LTR16C LTR ERVL 245 491 0 292 245 0 48 chr20 27049511 27049628 -45104254 - MIR SINE MIR -77 131 45 787 238 35 6 chr20 27049896 27050068 -45103814 + MER5A DNA MER1_type 1 177 -12 303 218 16 105 chr20 27051097 27051221 -45102661 + MIR SINE MIR 100 212 -50 301 68 14 54 chr20 27051258 27051332 -45102550 + (TTA)n Simple_repeat Simple_repeat 2 72 0 1213 276 89 3 chr20 27051528 27051919 -45101963 + LTR16C LTR ERVL 67 491 0 410 256 103 37 chr20 27052118 27052360 -45101522 + L1ME4a LINE L1 5672 5929 -192 835 150 0 0 chr20 27052375 27052495 -45101387 - FLAM_C SINE Alu -13 120 1 2039 101 69 0 chr20 27052580 27052868 -45101014 - AluY SINE Alu -3 308 1 199 284 185 75 chr20 27053155 27053443 -45100439 - L2 LINE L2 -337 2977 2637 1091 207 231 42 chr20 27053443 27053776 -45100106 + MSTD LTR MaLR 1 396 0 199 284 185 75 chr20 27053776 27053860 -45100022 - L2 LINE L2 -677 2637 2564 2423 81 0 0 chr20 27055376 27055673 -45098209 - AluY SINE Alu -14 297 1 299 242 62 16 chr20 27055717 27055869 -45098013 - MSTC LTR MaLR -146 250 45 233 269 148 53 chr20 27056111 27056394 -45097488 + L1MC/D LINE L1 5255 5564 -2244 249 213 31 106 chr20 27057229 27057389 -45096493 + HAL1b LINE L1 1191 1338 -10 938 205 0 0 chr20 27057472 27057633 -45096249 + FRAM SINE Alu 1 161 -15 1713 158 13 26 chr20 27057776 27058086 -45095796 + AluJb SINE Alu 1 306 -6 278 362 158 26 chr20 27058181 27058485 -45095397 - L2 LINE L2 -9 3263 2920 25 0 0 0 chr20 27060387 27060412 -45093470 + AT_rich Low_complexity Low_complexity 1 25 0 1772 145 35 14 chr20 27060478 27060760 -45093122 + AluSx SINE Alu 7 294 -18 1355 122 0 11 chr20 27060880 27061069 -45092813 + AluSx SINE Alu 1 187 -125 1051 81 6 63 chr20 27061472 27061646 -45092236 - L1PB4 LINE L1 -222 5934 5771 1428 194 4 4 chr20 27061646 27061885 -45091997 + L1PB4 LINE L1 5905 6156 0 1328 232 116 19 chr20 27061891 27063014 -45090868 - L1MDb LINE L1 -4411 1995 783 * 4961 197 29 21 chr20 27062979 27064338 -45089544 + L1MC2 LINE L1 4847 6227 -117 1741 78 102 0 chr20 27064338 27064582 -45089300 + AluY SINE Alu 37 305 -6 4961 197 29 21 chr20 27064582 27064699 -45089183 + L1MC2 LINE L1 6227 6342 -2 709 255 103 11 chr20 27065196 27065522 -45088360 + L1MC4 LINE L1 7431 7711 -97 237 196 0 0 chr20 27065524 27065580 -45088302 + (CA)n Simple_repeat Simple_repeat 1 56 0 331 314 77 12 chr20 27065598 27065767 -45088115 + MIR3 SINE MIR 3 182 -26 1151 57 23 17 chr20 27065862 27065927 -45087955 + (GAAA)n Simple_repeat Simple_repeat 1 243 0 1151 57 23 17 chr20 27065927 27066104 -45087778 + (GAAA)n Simple_repeat Simple_repeat 1 178 0 638 108 0 10 chr20 27066159 27066261 -45087621 + (GGAGA)n Simple_repeat Simple_repeat 4 104 0 507 242 52 33 chr20 27067039 27067192 -45086690 + MIR SINE MIR 90 245 -17 1716 177 50 21 chr20 27067420 27067798 -45086084 - Charlie5 DNA MER1_type 0 2624 2236 299 137 14 68 chr20 27067800 27067873 -45086009 - Charlie5 DNA MER1_type -2488 124 56 23 0 0 0 chr20 27068101 27068124 -45085758 + AT_rich Low_complexity Low_complexity 1 23 0 195 42 0 0 chr20 27068536 27068560 -45085322 + (CA)n Simple_repeat Simple_repeat 2 25 0 44517 46 2 1 chr20 27068597 27074750 -45079132 + L1PA3 LINE L1 1 6155 0 246 32 0 0 chr20 27075091 27075122 -45078760 + (TTCA)n Simple_repeat Simple_repeat 4 34 0 484 292 39 13 chr20 27075319 27075473 -45078409 - MIR SINE MIR -90 172 15 518 270 65 50 chr20 27075882 27076082 -45077800 + MIR SINE MIR 35 237 -25 401 185 74 0 chr20 27076485 27076566 -45077316 - MER58B DNA MER1_type -3 338 252 322 279 13 13 chr20 27076579 27076658 -45077224 + MER5B DNA MER1_type 56 134 -44 2271 101 3 16 chr20 27077825 27078132 -45075750 + AluSg1 SINE Alu 1 303 -6 2390 109 0 0 chr20 27078647 27078959 -45074923 + AluSx SINE Alu 1 312 0 2490 151 39 0 chr20 27079320 27079751 -45074131 + L1PB4 LINE L1 5709 6156 0 421 37 37 73 chr20 27080375 27080484 -45073398 + (ATTAG)n Simple_repeat Simple_repeat 4 108 0 235 288 128 59 chr20 27081853 27082159 -45071723 - LTR16C LTR ERVL -164 327 1 800 218 24 6 chr20 27083193 27083363 -45070519 + MER5A DNA MER1_type 17 189 0 1517 155 29 4 chr20 27083989 27084266 -45069616 + L1MC1 LINE L1 6047 6330 -3 398 261 11 0 chr20 27084293 27084385 -45069497 - MER5A DNA MER1_type -93 96 4 1088 151 0 6 chr20 27084517 27084676 -45069206 + FAM SINE Alu 12 169 -16 304 291 0 0 chr20 27084687 27084766 -45069116 - L1MC4 LINE L1 -1339 6703 6625 417 220 0 0 chr20 27084791 27084900 -45068982 + (TA)n Simple_repeat Simple_repeat 1 109 0 311 69 0 69 chr20 27084907 27084965 -45068917 - MADE1 DNA Mariner 0 80 27 2003 141 3 3 chr20 27085233 27085556 -45068326 - AluSx SINE Alu 0 323 1 319 318 148 32 chr20 27085827 27086044 -45067838 + MIR SINE MIR 21 262 0 1299 260 103 29 chr20 27086688 27087242 -45066640 + L1ME3A LINE L1 5541 6135 -35 13791 165 87 1 chr20 27087716 27091905 -45061977 + L1PBa LINE L1 1 4553 -2309 1789 94 41 0 chr20 27091905 27092170 -45061712 + L1PB1 LINE L1 5873 6150 -1 210 216 0 0 chr20 27092249 27092286 -45061596 + (CTG)n Simple_repeat Simple_repeat 2 38 0 278 267 58 23 chr20 27092968 27093054 -45060828 - L2 LINE L2 -2 3311 3223 900 230 127 57 chr20 27093247 27093593 -45060289 + Zaphod DNA AcHobo 223 620 -3411 7383 38 0 0 chr20 27093593 27094507 -45059375 + L1PA4 LINE L1 5234 6147 -8 900 230 127 57 chr20 27094507 27094686 -45059196 + Zaphod DNA AcHobo 620 785 -3246 * 4897 189 62 65 chr20 27094683 27095998 -45057884 + Zaphod DNA AcHobo 2409 3720 -311 2410 103 0 0 chr20 27095998 27096309 -45057573 + AluSx SINE Alu 1 311 -1 4897 189 62 65 chr20 27096309 27096615 -45057267 + Zaphod DNA AcHobo 3720 4025 -6 1983 77 0 0 chr20 27096842 27097088 -45056794 + AluY SINE Alu 56 301 -10 3093 41 0 13 chr20 27099208 27099599 -45054283 - L1PA3 LINE L1 0 6155 5770 41744 45 0 3 chr20 27099615 27105779 -45048103 - L1PA3 LINE L1 0 6155 7 1412 192 4 11 chr20 27105808 27106068 -45047814 + AluJo SINE Alu 1 258 -54 23 0 0 0 chr20 27106279 27106302 -45047580 + AT_rich Low_complexity Low_complexity 1 23 0 754 296 22 13 chr20 27106720 27106950 -45046932 + MIR SINE MIR 31 262 0 727 249 98 0 chr20 27107611 27107836 -45046046 + LTR16C LTR ERVL 245 491 0 224 109 65 0 chr20 27109047 27109093 -45044789 + T-rich Low_complexity Low_complexity 2 50 0 230 313 15 0 chr20 27109114 27109181 -45044701 + Charlie8 DNA MER1_type 198 265 -2152 40 83 0 0 chr20 27109414 27109510 -45044372 + AT_rich Low_complexity Low_complexity 1 96 0 440 262 41 33 chr20 27109841 27109963 -45043919 + MER5C DNA MER1_type 2 124 -200 204 88 176 0 chr20 27110127 27110161 -45043721 + MER5C DNA MER1_type 285 324 0 2441 96 3 0 chr20 27111801 27112113 -45041769 - AluSp SINE Alu 0 313 1 2464 167 29 9 chr20 27112162 27112610 -45041272 - MSTB2 LTR MaLR 0 457 1 186 308 115 13 chr20 27113569 27113647 -45040235 - L2 LINE L2 -25 3247 3162 242 352 22 0 chr20 27113850 27113941 -45039941 - MIR3 SINE MIR -30 178 86 2277 88 3 55 chr20 27114067 27114397 -45039485 + AluSp SINE Alu 1 313 0 9156 180 26 13 chr20 27114794 27117955 -45035927 - L1MA4A LINE L1 -1 7004 3792 6611 206 26 60 chr20 27117952 27119664 -45034218 - L1MA4A LINE L1 -4631 2218 565 * 2046 103 7 36 chr20 27119806 27120107 -45033775 + AluSx SINE Alu 1 292 -20 332 100 0 0 chr20 27120575 27120625 -45033257 - MADE1 DNA Mariner 0 80 31 371 319 8 0 chr20 27120739 27120858 -45033024 - MIR SINE MIR -12 250 131 * 727 286 84 80 chr20 27120856 27121183 -45032699 - L2 LINE L2 -4 3309 2985 1899 125 36 4 chr20 27121183 27121462 -45032420 + AluSx SINE Alu 1 288 -24 223 49 49 0 chr20 27121466 27121507 -45032375 + (CAA)n Simple_repeat Simple_repeat 2 44 0 727 286 84 80 chr20 27121507 27121919 -45031963 - L2 LINE L2 -330 2983 2567 573 283 44 19 chr20 27121942 27122147 -45031735 - MIR SINE MIR -12 250 41 224 180 20 20 chr20 27122193 27122243 -45031639 - L2 LINE L2 -2483 831 782 198 329 161 13 chr20 27122285 27122434 -45031448 - MIR SINE MIR -1 261 91 307 299 119 34 chr20 27122647 27122857 -45031025 - MIR SINE MIR -42 220 4 254 400 46 31 chr20 27122892 27123152 -45030730 + L2 LINE L2 3001 3264 -8 2171 125 3 0 chr20 27123286 27123582 -45030300 + AluSx SINE Alu 1 297 -15 548 280 113 11 chr20 27123751 27123937 -45029945 + MIR SINE MIR 10 214 -48 1015 299 101 20 chr20 27125788 27126015 -45027867 - L1MEc LINE L1 -4266 2130 1923 857 227 37 19 chr20 27126015 27126114 -45027768 - MER58A DNA MER1_type -2196 224 128 348 24 0 0 chr20 27126114 27126155 -45027727 + (GA)n Simple_repeat Simple_repeat 2 42 0 857 227 37 19 chr20 27126155 27126271 -45027611 - MER58A DNA MER1_type -2292 128 5 1015 299 101 20 chr20 27126271 27126639 -45027243 - L1MEc LINE L1 -4473 1923 1487 555 265 41 71 chr20 27127318 27127586 -45026296 - MLT1K LTR MaLR 0 588 329 238 214 100 0 chr20 27127761 27127831 -45026051 - MLT1K LTR MaLR -500 88 12 419 247 184 36 chr20 27127933 27128156 -45025726 - LTR16C LTR ERVL -6 485 230 1725 232 48 63 chr20 27128168 27128672 -45025210 - MLT1D LTR MaLR -4 501 6 188 284 119 37 chr20 27129331 27129440 -45024442 - MIR SINE MIR -51 211 94 2433 40 40 3 chr20 27129725 27130025 -45023857 + AluY SINE Alu 1 311 0 2131 129 10 0 chr20 27130060 27130370 -45023512 - AluSp SINE Alu 0 313 1 422 291 8 16 chr20 27131248 27131375 -45022507 + L2 LINE L2 1378 1503 -1811 294 307 175 0 chr20 27131486 27131600 -45022282 + L2 LINE L2 3138 3271 -1 277 204 160 3 chr20 27131829 27131924 -45021958 - MLT1I LTR MaLR -18 549 281 326 311 132 14 chr20 27132079 27132298 -45021584 - MLT1H LTR MaLR -300 249 5 188 214 146 22 chr20 27133356 27133445 -45020437 + MIR SINE MIR 33 132 -76 218 216 14 0 chr20 27133611 27133685 -45020197 + (CA)n Simple_repeat Simple_repeat 2 76 0 9805 186 10 7 chr20 27137917 27140985 -45012897 + L1PB2 LINE L1 3073 6150 -1 1989 111 42 7 chr20 27140989 27141278 -45012604 + AluSx SINE Alu 1 299 -13 965 219 81 3 chr20 27141278 27141561 -45012321 - MER33 DNA MER1_type -19 305 1 465 297 81 24 chr20 27141778 27141987 -45011895 + MIR SINE MIR 5 225 -37 1008 257 174 3 chr20 27142043 27142382 -45011500 + MLT1I LTR MaLR 3 399 -10 290 26 26 0 chr20 27144324 27144363 -45009519 + (CA)n Simple_repeat Simple_repeat 2 41 0 22 70 0 0 chr20 27145892 27145935 -45007947 + AT_rich Low_complexity Low_complexity 1 43 0 358 279 124 41 chr20 27145956 27146343 -45007539 - L1ME4a LINE L1 -220 5901 5475 1535 187 7 111 chr20 27146343 27146750 -45007132 - MLT1A1 LTR MaLR 0 365 1 358 279 124 41 chr20 27146750 27146800 -45007082 - L1ME4a LINE L1 -646 5475 5431 188 178 188 50 chr20 27147730 27147831 -45006051 - MIR SINE MIR -17 245 131 1054 213 57 0 chr20 27149323 27149534 -45004348 - MER58A DNA MER1_type 0 224 2 961 274 24 5 chr20 27149589 27149968 -45003914 + L1 LINE L1 3139 3524 -2622 1980 180 21 7 chr20 27149969 27150396 -45003486 + L1MB4 LINE L1 5742 6174 -6 391 329 81 55 chr20 27150679 27151184 -45002698 + L1M4 LINE L1 2200 2717 -3429 1298 82 25 10 chr20 27151185 27151381 -45002501 + L1MA5A LINE L1 6095 6293 -4 21 0 0 0 chr20 27151388 27151409 -45002473 + AT_rich Low_complexity Low_complexity 1 21 0 2135 241 48 34 chr20 27151417 27152270 -45001612 + L1M3 LINE L1 1170 2122 -4262 897 189 36 5 chr20 27152265 27152461 -45001421 + L1M3 LINE L1 5599 5800 -380 * 7830 221 94 46 chr20 27152450 27152797 -45001085 + L1M3 LINE L1 2115 2444 -3972 2419 25 7 3 chr20 27152797 27153120 -45000762 - AluY SINE Alu 0 324 1 7830 221 94 46 chr20 27153120 27153414 -45000468 + L1M3 LINE L1 2444 2722 -3694 1200 191 17 4 chr20 27153414 27153645 -45000237 - MER46A DNA MER2_type -2 234 1 7830 221 94 46 chr20 27153645 27154590 -44999292 + L1M3 LINE L1 2722 3620 -2796 2505 77 0 0 chr20 27154590 27154901 -44998981 + AluY SINE Alu 1 311 0 7830 221 94 46 chr20 27154901 27155347 -44998535 + L1M3 LINE L1 3620 4043 -2373 2169 119 0 16 chr20 27155347 27155659 -44998223 - AluSx SINE Alu -5 307 1 7830 221 94 46 chr20 27155659 27157137 -44996745 + L1M3 LINE L1 4043 5789 -627 13692 185 38 28 chr20 27157339 27164255 -44989627 + L1MA4A LINE L1 1 6999 -6 264 246 227 82 chr20 27165519 27165933 -44987949 + L2 LINE L2 2729 3168 -145 335 296 131 38 chr20 27165938 27166205 -44987677 - LTR16C LTR ERVL -2 489 198 306 220 17 0 chr20 27166520 27166579 -44987303 + L2 LINE L2 3247 3306 -7 249 313 73 0 chr20 27168973 27169069 -44984813 + MIR SINE MIR 142 244 -18 488 231 43 87 chr20 27169328 27169536 -44984346 - MER63A DNA MER1_type -11 199 1 225 0 0 0 chr20 27173961 27173986 -44979896 + (TG)n Simple_repeat Simple_repeat 2 26 0 187 270 143 0 chr20 27174044 27174107 -44979775 - MIR SINE MIR 0 262 191 1066 254 75 80 chr20 27174166 27174603 -44979279 + LTR16C LTR ERVL 57 491 0 224 214 243 14 chr20 27174607 27174677 -44979205 - MIR SINE MIR -73 189 104 1879 119 0 0 chr20 27174681 27174941 -44978941 + AluSx SINE Alu 1 260 -52 23 0 0 0 chr20 27175954 27175977 -44977905 + AT_rich Low_complexity Low_complexity 1 23 0 2386 71 7 3 chr20 27177124 27177432 -44976450 - AluY SINE Alu -2 309 1 24 77 0 0 chr20 27178394 27178446 -44975436 + AT_rich Low_complexity Low_complexity 1 52 0 30 77 0 0 chr20 27178548 27178613 -44975269 + AT_rich Low_complexity Low_complexity 1 65 0 460 259 37 7 chr20 27178984 27179119 -44974763 + L1MC5 LINE L1 6692 6830 -1131 2216 255 55 80 chr20 27179126 27180199 -44973683 + L1M4b LINE L1 11 1107 -5748 2909 70 0 3 chr20 27180199 27180585 -44973297 + L1PA5 LINE L1 5770 6154 0 2216 255 55 80 chr20 27180585 27181408 -44972474 + L1M4b LINE L1 1107 1949 -4906 3854 179 46 21 chr20 27181560 27182366 -44971516 + LTR1B LTR ERV1 1 826 0 22 0 0 0 chr20 27182439 27182461 -44971421 + AT_rich Low_complexity Low_complexity 1 22 0 310 231 19 96 chr20 27182461 27182565 -44971317 - L1M4b LINE L1 -5952 907 812 876 233 3 50 chr20 27182569 27182852 -44971030 + L1M4b LINE L1 1959 2228 -4731 4634 269 75 26 chr20 27182869 27183018 -44970864 + L1MB5 LINE L1 15 155 -6804 1879 141 0 40 chr20 27183018 27183322 -44970560 + AluY SINE Alu 1 292 -19 4634 269 75 26 chr20 27183322 27184648 -44969234 + L1MB5 LINE L1 155 1638 -5321 1240 177 4 33 chr20 27184648 27184891 -44968991 + MER46A DNA MER2_type 1 236 0 4634 269 75 26 chr20 27184891 27185681 -44968201 + L1MB5 LINE L1 1638 2388 -4571 667 247 60 42 chr20 27186043 27186428 -44967454 + L1MB5 LINE L1 2756 3147 -3991 1382 272 76 21 chr20 27186616 27187050 -44966832 + Zaphod DNA AcHobo 160 617 -3414 231 218 115 11 chr20 27187059 27187146 -44966736 + Zaphod DNA AcHobo 592 687 -3344 25 0 0 0 chr20 27190205 27190230 -44963652 + AT_rich Low_complexity Low_complexity 1 25 0 631 111 62 4 chr20 27190380 27190626 -44963256 + (TA)n Simple_repeat Simple_repeat 1 260 0 301 188 10 89 chr20 27190705 27190806 -44963076 + L1MC4 LINE L1 6611 6703 -1339 568 160 29 17 chr20 27190806 27190981 -44962901 + (TA)n Simple_repeat Simple_repeat 1 177 0 527 152 44 15 chr20 27191049 27191765 -44962117 + (TA)n Simple_repeat Simple_repeat 1 736 0 287 203 0 53 chr20 27191801 27191988 -44961894 + (TA)n Simple_repeat Simple_repeat 1 177 0 533 158 53 9 chr20 27192010 27192387 -44961495 + (TA)n Simple_repeat Simple_repeat 1 434 -57 227 30 0 30 chr20 27192387 27192420 -44961462 + (TTATA)n Simple_repeat Simple_repeat 3 34 0 533 158 53 9 chr20 27192420 27192481 -44961401 + (TA)n Simple_repeat Simple_repeat 434 491 0 3166 124 6 4 chr20 27192516 27193016 -44960866 + L1PB1 LINE L1 5646 6146 -5 3096 235 61 44 chr20 27193038 27193190 -44960692 + L1MB5 LINE L1 3126 3274 -3683 1500 252 16 38 chr20 27193190 27193643 -44960239 + LTR47B LTR ERVL 1 443 0 3096 235 61 44 chr20 27193643 27193940 -44959942 + L1MB5 LINE L1 3274 3564 -3393 2084 122 0 26 chr20 27193940 27194243 -44959639 - AluSg SINE Alu -15 295 1 3096 235 61 44 chr20 27194243 27195024 -44958858 + L1MB5 LINE L1 3564 4378 -2579 2364 41 0 0 chr20 27195058 27195353 -44958529 - L1PA6 LINE L1 -907 5239 4945 6902 67 1 1 chr20 27195353 27196249 -44957633 + L1PA6 LINE L1 5258 6154 0 4032 212 61 13 chr20 27196251 27197848 -44956034 + L1MB5 LINE L1 5312 6979 -6 3079 197 86 36 chr20 27198094 27199604 -44954278 + L1ME1 LINE L1 4597 6330 -4 1453 199 45 68 chr20 27199772 27200169 -44953713 - MLT1B LTR MaLR 0 390 3 379 289 107 0 chr20 27200322 27200443 -44953439 + MER5A DNA MER1_type 55 188 -1 183 333 30 20 chr20 27200443 27200502 -44953380 - L3 LINE CR1 -658 919 860 728 182 110 38 chr20 27200504 27200713 -44953169 - MER58A DNA MER1_type 0 224 1 211 320 93 10 chr20 27200861 27200958 -44952924 + MER5A DNA MER1_type 64 168 -21 418 274 28 95 chr20 27201356 27201535 -44952347 + MIR SINE MIR 31 197 -65 1676 220 41 17 chr20 27201609 27202023 -44951859 - L1MC3 LINE L1 -8 7777 7354 386 202 0 85 chr20 27202922 27203016 -44950866 + MIR3 SINE MIR 123 208 0 383 234 195 19 chr20 27203785 27203939 -44949943 + MER5A DNA MER1_type 9 189 0 2253 100 20 0 chr20 27204061 27204362 -44949520 + AluSx SINE Alu 1 307 -5 2173 130 0 0 chr20 27206165 27206464 -44947418 + AluSx SINE Alu 1 299 -13 302 164 30 30 chr20 27206535 27206602 -44947280 + MER5A DNA MER1_type 5 71 -118 209 374 150 27 chr20 27207079 27207373 -44946509 + L2 LINE L2 2921 3250 -22 276 359 0 0 chr20 27208295 27208387 -44945495 - MIR3 SINE MIR -27 181 90 771 213 33 0 chr20 27208434 27208617 -44945265 + MER5A DNA MER1_type 1 189 0 195 338 0 13 chr20 27209772 27209849 -44944033 - MIR SINE MIR -108 154 79 398 159 11 0 chr20 27210661 27210749 -44943133 + (TA)n Simple_repeat Simple_repeat 2 90 0 252 77 0 0 chr20 27211920 27211959 -44941923 + (TTCC)n Simple_repeat Simple_repeat 2 40 0 264 284 99 37 chr20 27212549 27212711 -44941171 - LTR33A LTR ERVL -235 288 117 815 203 52 0 chr20 27213270 27213459 -44940423 + MIR SINE MIR 34 228 -34 633 219 102 0 chr20 27214691 27214828 -44939054 + MER5A DNA MER1_type 1 151 -38 780 175 17 0 chr20 27216437 27216448 -44937434 + (TCCA)n Simple_repeat Simple_repeat 1 10 -170 2536 99 6 0 chr20 27216448 27216800 -44937082 - THE1A LTR MaLR -1 354 1 780 175 17 0 chr20 27216800 27216965 -44936917 + (TCCA)n Simple_repeat Simple_repeat 10 180 0 246 217 33 0 chr20 27216976 27217036 -44936846 + (TCTA)n Simple_repeat Simple_repeat 4 65 0 205 191 32 16 chr20 27217030 27217093 -44936789 + (TATAA)n Simple_repeat Simple_repeat 5 68 0 * 467 295 90 37 chr20 27217095 27217363 -44936519 - MLT1J LTR MaLR -8 503 222 26 50 0 0 chr20 27217574 27217614 -44936268 + AT_rich Low_complexity Low_complexity 1 40 0 210 140 0 60 chr20 27217855 27217905 -44935977 + (GAAA)n Simple_repeat Simple_repeat 4 50 0 450 297 8 21 chr20 27219414 27219580 -44934302 - MIR SINE MIR -78 130 22 364 274 26 17 chr20 27219605 27219722 -44934160 - MER94 DNA DNA -1 133 16 289 247 45 11 chr20 27220205 27220294 -44933588 - MLT1K LTR MaLR -122 466 375 287 307 10 0 chr20 27220428 27220529 -44933353 - L1ME1 LINE L1 -15 6151 6050 332 285 62 62 chr20 27221420 27221599 -44932283 + MIR3 SINE MIR 20 198 -10 277 399 31 21 chr20 27221665 27221858 -44932024 - MIR SINE MIR -22 240 46 1082 243 42 52 chr20 27222563 27222987 -44930895 - HsTC2 DNA Tc2 -15 1883 1288 283 198 181 69 chr20 27222980 27223096 -44930786 - HsTC2 DNA Tc2 -1747 151 23 * 293 214 0 0 chr20 27223843 27223899 -44929983 + MER63 DNA MER1_type 696 751 -311 550 110 258 18 chr20 27224527 27224658 -44929224 + MLT1B LTR MaLR 268 390 0 656 246 16 37 chr20 27224658 27224845 -44929037 - L1ME LINE L1 -445 5725 5543 335 333 23 23 chr20 27225845 27225974 -44927908 - MIR SINE MIR -114 148 20 267 308 75 15 chr20 27225996 27226129 -44927753 + L3 LINE CR1 750 890 -687 437 264 159 15 chr20 27226240 27226441 -44927441 + MIR SINE MIR 3 232 -30 458 321 77 24 chr20 27226673 27226960 -44926922 - L2 LINE L2 -6 3307 3006 1810 172 39 0 chr20 27227609 27227894 -44925988 + AluJb SINE Alu 1 296 -16 254 290 68 74 chr20 27228204 27228380 -44925502 + MER5B DNA MER1_type 2 176 -2 2044 164 9 6 chr20 27228469 27228817 -44925065 + MLT1A1 LTR MaLR 13 361 -4 1419 130 40 0 chr20 27230747 27230994 -44922888 + L1MA5A LINE L1 6031 6287 -10 21 0 0 0 chr20 27231173 27231194 -44922688 + AT_rich Low_complexity Low_complexity 1 21 0 235 296 11 45 chr20 27233511 27233599 -44920283 + L2 LINE L2 3188 3272 0 411 214 200 21 chr20 27233982 27234122 -44919760 - MER5B DNA MER1_type -7 171 7 188 330 143 22 chr20 27237038 27237268 -44916614 + MIR SINE MIR 5 262 0 242 283 101 0 chr20 27237903 27238002 -44915880 + MIR SINE MIR 53 161 -101 765 293 44 1 chr20 27239041 27239258 -44914624 + MIR SINE MIR 33 256 -6 279 132 38 0 chr20 27239759 27239812 -44914070 + L1MB3 LINE L1 5279 5333 -847 628 231 102 5 chr20 27239828 27240014 -44913868 + L1MA4 LINE L1 6086 6289 -11 4733 170 14 6 chr20 27240018 27240875 -44913007 + L1MB3 LINE L1 5319 6182 -1 4318 76 30 33 chr20 27242121 27242317 -44911565 - L1P LINE L1 -959 5187 4992 5494 19 0 0 chr20 27242317 27242943 -44910939 - L1PA3 LINE L1 -4 6151 5526 4318 76 30 33 chr20 27242943 27243389 -44910493 - L1P LINE L1 -1154 4992 4547 6907 62 2 8 chr20 27243391 27244364 -44909518 + L1PA7 LINE L1 5185 6152 -2 691 309 41 16 chr20 27244500 27244746 -44909136 - MIR SINE MIR -6 256 5 483 260 50 79 chr20 27245038 27245369 -44908513 - MLT1I LTR MaLR -25 384 94 603 0 0 0 chr20 27246211 27246278 -44907604 + (TTTTC)n Simple_repeat Simple_repeat 5 71 0 340 326 76 29 chr20 27246931 27247103 -44906779 + MIR SINE MIR 37 216 -46 764 127 14 7 chr20 27247185 27247327 -44906555 - L1MA4A LINE L1 -16 6287 6145 315 226 86 0 chr20 27247338 27247431 -44906451 + Charlie8 DNA MER1_type 71 171 -2246 1167 277 79 39 chr20 27247437 27247996 -44905886 - MLT1G1 LTR MaLR -6 589 9 315 328 82 41 chr20 27247993 27248188 -44905694 + Charlie8 DNA MER1_type 152 354 -2063 * 2348 251 94 33 chr20 27248417 27249357 -44904525 + L1M4c LINE L1 704 1700 -4842 2343 157 2 2 chr20 27249371 27249765 -44904117 - L1PA16 LINE L1 0 6166 5773 11468 155 16 4 chr20 27249769 27252536 -44901346 - L1PA13 LINE L1 -11 6152 3256 * 38135 84 9 7 chr20 27252525 27258661 -44895221 - L1PA6 LINE L1 0 6154 11 8701 216 45 15 chr20 27258672 27260829 -44893053 - L1PA13 LINE L1 -2866 3280 1060 4510 184 11 17 chr20 27260837 27262384 -44891498 - L1PA16 LINE L1 -315 5851 4316 277 260 0 0 chr20 27262375 27262448 -44891434 + L1M4c LINE L1 1836 1908 -4738 * 14515 194 15 20 chr20 27262443 27266712 -44887170 + L1PB1 LINE L1 1697 5988 -879 2302 105 0 0 chr20 27266712 27267017 -44886865 + AluSg SINE Alu 1 305 -5 14515 194 15 20 chr20 27267017 27267590 -44886292 + L1PB1 LINE L1 5988 6567 -300 2251 107 3 0 chr20 27267590 27267889 -44885993 - AluSp SINE Alu -13 300 1 14515 194 15 20 chr20 27267889 27268189 -44885693 + L1PB1 LINE L1 6567 6867 0 3671 252 75 13 chr20 27268289 27270158 -44883724 + L1M4c LINE L1 2185 4182 -2462 693 135 45 8 chr20 27270160 27270293 -44883589 + L1MB5 LINE L1 6037 6174 0 7810 179 40 26 chr20 27270304 27271771 -44882111 + L1MC3 LINE L1 6128 7622 -163 216 97 0 0 chr20 27271771 27271802 -44882080 + (CAT)n Simple_repeat Simple_repeat 2 32 0 7810 179 40 26 chr20 27271802 27271968 -44881914 + L1MC3 LINE L1 7622 7784 -1 254 370 41 27 chr20 27271979 27272125 -44881757 - MER5B DNA MER1_type -1 177 30 274 297 81 27 chr20 27273337 27273522 -44880360 - MIR SINE MIR -28 234 40 637 196 24 183 chr20 27273618 27273995 -44879887 - L1M4 LINE L1 -2100 3870 3554 1531 228 58 11 chr20 27274010 27274458 -44879424 - L1M4 LINE L1 -3236 2734 2266 24 0 0 0 chr20 27274527 27274551 -44879331 + AT_rich Low_complexity Low_complexity 1 24 0 1947 245 45 15 chr20 27274552 27275531 -44878351 - L1M4 LINE L1 -4714 1177 1 439 225 72 0 chr20 27275506 27275644 -44878238 - L1M4 LINE L1 -3730 2240 2093 * 8324 202 40 11 chr20 27275668 27279940 -44873942 + L1PB1 LINE L1 2042 6186 -616 452 32 0 16 chr20 27279940 27280003 -44873879 + (TA)n Simple_repeat Simple_repeat 1 62 0 207 100 0 0 chr20 27280002 27280032 -44873850 + (CA)n Simple_repeat Simple_repeat 2 31 0 * 8324 202 40 11 chr20 27280003 27280324 -44873558 + L1PB1 LINE L1 6186 6800 -2 470 239 68 8 chr20 27280547 27280664 -44873218 + MER5C DNA MER1_type 1 124 -200 509 283 154 41 chr20 27281543 27281861 -44872021 - MLT1I LTR MaLR -54 355 2 497 289 57 11 chr20 27281894 27282157 -44871725 - L1ME LINE L1 -316 5805 5531 323 268 71 16 chr20 27282766 27282893 -44870989 + L1MC4a LINE L1 5186 5319 -827 519 324 51 30 chr20 27282987 27283358 -44870524 + L1MC4a LINE L1 5533 5911 -1897 488 284 138 37 chr20 27283368 27283586 -44870296 + MIR SINE MIR 2 241 -21 21 0 0 0 chr20 27283838 27283859 -44870023 + AT_rich Low_complexity Low_complexity 1 21 0 186 188 0 62 chr20 27284011 27284059 -44869823 - L2 LINE L2 -3 3269 3225 22 70 0 0 chr20 27285130 27285173 -44868709 + AT_rich Low_complexity Low_complexity 1 43 0 1768 108 88 30 chr20 27287866 27288187 -44865695 - AluSx SINE Alu 0 338 1 499 213 50 35 chr20 27291741 27291882 -44862000 + MER69 DNA AcHobo 2380 2522 -4 856 219 16 37 chr20 27292762 27293004 -44860878 - L1MC4 LINE L1 -453 7589 7353 529 236 260 8 chr20 27293006 27293264 -44860618 + L1MC4 LINE L1 7720 8042 0 288 0 0 0 chr20 27293924 27293956 -44859926 + (TTA)n Simple_repeat Simple_repeat 2 33 0 404 301 55 27 chr20 27294268 27294414 -44859468 + MER91A DNA MER1_type 10 159 -37 311 186 17 0 chr20 27294690 27294749 -44859133 + L1ME4a LINE L1 5810 5869 -252 32 0 0 0 chr20 27294944 27294976 -44858906 + AT_rich Low_complexity Low_complexity 1 32 0 252 254 101 29 chr20 27295087 27295296 -44858586 + L1ME4a LINE L1 5881 6104 -17 745 257 75 0 chr20 27296778 27296992 -44856890 - MER46C DNA MER2_type -108 230 1 682 297 168 18 chr20 27296992 27297653 -44856229 + L2 LINE L2 2284 3052 -261 223 320 107 0 chr20 27297817 27297892 -44855990 + L2 LINE L2 3231 3313 0 307 247 0 13 chr20 27299459 27299536 -44854346 - MIR SINE MIR -119 143 68 2460 63 0 3 chr20 27300624 27300923 -44852959 + AluY SINE Alu 2 299 -12 284 256 139 0 chr20 27301041 27301127 -44852755 - LTR16A LTR ERVL -349 101 4 2392 154 158 9 chr20 27301127 27301575 -44852307 + MLT2B2 LTR ERVL 1 515 0 299 261 54 0 chr20 27303311 27303403 -44850479 - MLT1H1 LTR MaLR 0 555 459 568 270 77 73 chr20 27303489 27303763 -44850119 - MLT1H1 LTR MaLR -280 275 1 507 326 78 35 chr20 27305645 27305989 -44847893 + LTR16C LTR ERVL 41 399 -92 486 75 0 0 chr20 27306849 27306916 -44846966 + (CA)n Simple_repeat Simple_repeat 2 68 0 22 35 0 0 chr20 27307360 27307389 -44846493 + AT_rich Low_complexity Low_complexity 1 29 0 1635 186 10 16 chr20 27308265 27308572 -44845310 + AluJb SINE Alu 1 305 -7 242 179 18 0 chr20 27309196 27309252 -44844630 + (TA)n Simple_repeat Simple_repeat 1 57 0 269 253 8 16 chr20 27309648 27309877 -44844005 + GA-rich Low_complexity Low_complexity 1 227 0 662 298 62 9 chr20 27309914 27310139 -44843743 - MIR SINE MIR -2 260 24 540 306 92 75 chr20 27310157 27310703 -44843179 + L2 LINE L2 1784 2338 -976 329 273 0 0 chr20 27310714 27310791 -44843091 + L2 LINE L2 3231 3307 -6 338 326 45 53 chr20 27310966 27311230 -44842652 + L2 LINE L2 2545 2806 -508 264 337 43 0 chr20 27311476 27311568 -44842314 + L2 LINE L2 3134 3229 -43 1663 175 0 11 chr20 27311674 27311943 -44841939 + AluJb SINE Alu 3 268 -44 245 260 118 31 chr20 27312043 27312170 -44841712 + HAL1b LINE L1 405 542 -806 24 0 0 0 chr20 27312454 27312478 -44841404 + AT_rich Low_complexity Low_complexity 1 24 0 4008 169 46 72 chr20 27312571 27313752 -44840130 + L1MB3 LINE L1 4998 6154 -29 307 278 65 78 chr20 27313776 27314021 -44839861 + L1M4 LINE L1 2278 2519 -3627 566 204 244 6 chr20 27314144 27314320 -44839562 - L1ME3 LINE L1 -6 6156 5939 183 156 0 0 chr20 27314373 27314405 -44839477 + CT-rich Low_complexity Low_complexity 1 32 0 1416 133 14 0 chr20 27314405 27314616 -44839266 - AluSp SINE Alu -19 294 81 294 56 0 0 chr20 27314687 27314723 -44839159 + THE1C LTR MaLR 1 36 -339 925 79 0 0 chr20 27314723 27314849 -44839033 - THE1-int LTR MaLR -29 1551 1426 * 5131 95 32 0 chr20 27314839 27315533 -44838349 + THE1B-int LTR MaLR 865 1580 0 2127 158 8 19 chr20 27315533 27315900 -44837982 + THE1B LTR MaLR 1 363 -1 1014 247 71 33 chr20 27315901 27316568 -44837314 - L1ME3 LINE L1 -480 5684 4994 227 155 35 0 chr20 27316659 27316717 -44837165 + (TATAA)n Simple_repeat Simple_repeat 4 63 0 2209 163 83 39 chr20 27316853 27317361 -44836521 - L1MA9 LINE L1 0 7731 7202 223 200 22 0 chr20 27317364 27317409 -44836473 + (CATATA)n Simple_repeat Simple_repeat 3 48 0 583 147 63 119 chr20 27317423 27317465 -44836417 - L1MA9 LINE L1 -496 7220 7177 23210 34 0 0 chr20 27317465 27321043 -44832839 - L1PA4 LINE L1 -6 6149 2571 583 147 63 119 chr20 27321043 27321168 -44832714 - L1MA9 LINE L1 -539 7177 7063 * 10739 228 42 28 chr20 27321165 27325375 -44828507 - L1MA9 LINE L1 -1306 6259 2265 2083 100 0 0 chr20 27326311 27326580 -44827302 - AluSq SINE Alu -12 301 33 416 313 113 54 chr20 27326882 27327499 -44826383 - L1 LINE L1 -2458 3688 3036 1643 227 37 0 chr20 27327685 27328090 -44825792 + L1MC3 LINE L1 7345 7764 -21 609 323 93 58 chr20 27328128 27328685 -44825197 + L2 LINE L2 2736 3313 0 * 1289 319 106 24 chr20 27328683 27329466 -44824416 - L2 LINE L2 -678 2636 1790 1387 123 0 30 chr20 27329530 27329733 -44824149 + MER107 DNA MER1_type 1 197 0 669 313 0 6 chr20 27330528 27330707 -44823175 - MER8 DNA MER2_type -60 179 2 284 308 82 26 chr20 27330740 27331201 -44822681 + L1M4 LINE L1 2686 3172 -2974 1120 93 0 7 chr20 27331562 27331712 -44822170 - L1PA11 LINE L1 0 6174 6026 43854 50 3 3 chr20 27331726 27333215 -44820667 - L1PA4 LINE L1 -15 6140 4653 2566 50 3 0 chr20 27333215 27333517 -44820365 - AluY SINE Alu -8 303 1 43854 50 3 3 chr20 27333517 27338162 -44815720 - L1PA4 LINE L1 -1502 4653 7 8142 138 24 9 chr20 27338184 27340190 -44813692 - L1PA11 LINE L1 -135 6039 4011 6718 148 18 22 chr20 27340202 27340921 -44812961 + L1P LINE L1 2770 3483 -2663 1901 157 73 20 chr20 27340921 27341277 -44812605 + THE1C LTR MaLR 1 375 0 6718 148 18 22 chr20 27341277 27341776 -44812106 + L1P LINE L1 3483 3983 -2163 258 260 14 27 chr20 27342000 27342073 -44811809 + L2 LINE L2 3134 3205 -67 287 188 0 14 chr20 27342134 27342203 -44811679 + GA-rich Low_complexity Low_complexity 2 69 0 476 286 125 37 chr20 27342736 27343089 -44810793 - L3 LINE CR1 -410 1167 784 823 192 0 0 chr20 27343583 27343713 -44810169 - FLAM_A SINE Alu -3 130 1 282 221 52 13 chr20 27344110 27344152 -44809730 - MER116 DNA Mariner 0 80 41 675 152 40 0 chr20 27344152 27344277 -44809605 + L1MD1 LINE L1 6112 6241 -1 282 221 52 13 chr20 27344277 27344311 -44809571 - MER116 DNA Mariner -39 41 1 332 335 82 41 chr20 27344883 27345247 -44808635 - L3 LINE CR1 -149 1428 1050 2118 219 61 18 chr20 27346406 27346950 -44806932 + L1MC4 LINE L1 7352 7918 -124 2093 136 0 7 chr20 27347319 27347629 -44806253 + AluSg SINE Alu 1 308 -2 335 258 52 108 chr20 27347647 27347860 -44806022 - MIR3 SINE MIR -1 207 7 1254 263 45 53 chr20 27348978 27349465 -44804417 - LTR16C LTR ERVL -4 487 5 202 302 201 34 chr20 27350044 27350842 -44803040 + L2 LINE L2 1936 2866 -448 387 203 6 22 chr20 27350868 27351050 -44802832 + CT-rich Low_complexity Low_complexity 2 180 0 183 114 0 0 chr20 27351073 27351108 -44802774 + (CA)n Simple_repeat Simple_repeat 2 36 0 266 374 74 40 chr20 27351144 27351441 -44802441 + L2 LINE L2 2965 3271 -1 231 36 0 0 chr20 27352499 27352527 -44801355 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 1615 181 105 56 chr20 27352893 27353303 -44800579 - MSTB1 LTR MaLR 0 432 3 2495 70 0 0 chr20 27353365 27353666 -44800216 - L1PA8 LINE L1 0 6172 5872 1601 32 0 0 chr20 27353666 27353851 -44800031 + L1PA8 LINE L1 5680 5864 -308 741 242 62 19 chr20 27353851 27354107 -44799775 - LTR16A1 LTR ERVL 0 457 191 223 174 0 43 chr20 27355371 27355440 -44798442 + (CATATA)n Simple_repeat Simple_repeat 6 71 0 689 296 94 32 chr20 27358669 27359041 -44794841 + LTR16C LTR ERVL 97 491 0 270 250 0 0 chr20 27360542 27360606 -44793276 + MIR SINE MIR 81 144 -64 2216 164 86 46 chr20 27361871 27362327 -44791555 - MER101 LTR ERV1 0 474 1 378 350 54 23 chr20 27363159 27363547 -44790335 + L1ME3 LINE L1 5539 5938 -224 22 88 0 0 chr20 27363789 27363846 -44790036 + AT_rich Low_complexity Low_complexity 1 57 0 24 32 0 0 chr20 27363903 27363934 -44789948 + AT_rich Low_complexity Low_complexity 1 31 0 853 241 58 0 chr20 27364278 27364485 -44789397 - MER58A DNA MER1_type -5 219 1 450 291 51 0 chr20 27365002 27365119 -44788763 - L2 LINE L2 -1 3271 3149 208 0 62 0 chr20 27365478 27365510 -44788372 + (TTTTTG)n Simple_repeat Simple_repeat 3 36 0 21 36 0 0 chr20 27366296 27366324 -44787558 + AT_rich Low_complexity Low_complexity 1 28 0 201 94 0 0 chr20 27366475 27366507 -44787375 + (TAGA)n Simple_repeat Simple_repeat 2 33 0 7716 55 21 0 chr20 27366511 27368097 -44785785 - L1PA5 LINE L1 -2 6152 4549 202 304 29 0 chr20 27369394 27369463 -44784419 + L2 LINE L2 3160 3230 -42 199 364 81 20 chr20 27369491 27369590 -44784292 + L2 LINE L2 3116 3220 -52 252 213 98 0 chr20 27369686 27369747 -44784135 - L3 LINE CR1 -1184 393 327 390 303 30 39 chr20 27369808 27369862 -44784020 - L1ME4a LINE L1 -293 5828 5775 731 74 0 11 chr20 27369862 27369957 -44783925 + L1PA7 LINE L1 6056 6149 -5 390 303 30 39 chr20 27369957 27370136 -44783746 - L1ME4a LINE L1 -346 5775 5597 420 275 28 0 chr20 27370491 27370600 -44783282 + L2 LINE L2 3202 3313 0 240 143 0 0 chr20 27371088 27371130 -44782752 + (CA)n Simple_repeat Simple_repeat 2 43 0 269 200 0 0 chr20 27374610 27374660 -44779222 - L2 LINE L2 0 3272 3223 867 138 26 53 chr20 27374685 27374785 -44779097 + MLT1A1 LTR MaLR 6 102 -263 1998 211 45 79 chr20 27374785 27375357 -44778525 + MLT2B3 LTR ERVL 1 553 -1 867 138 26 53 chr20 27375357 27375408 -44778474 + MLT1A1 LTR MaLR 102 153 -212 3851 198 54 54 chr20 27375453 27375528 -44778354 + L1MA9 LINE L1 5254 5328 -984 1688 85 9 13 chr20 27375528 27375752 -44778130 + AluY SINE Alu 74 296 -15 3851 198 54 54 chr20 27375752 27376705 -44777177 + L1MA9 LINE L1 5327 6282 -30 570 300 141 19 chr20 27376793 27377407 -44776475 - L2 LINE L2 -117 3196 2520 1916 114 73 0 chr20 27377448 27377721 -44776161 + AluSx SINE Alu 2 294 -18 435 279 33 66 chr20 27377936 27378051 -44775831 - MER5A DNA MER1_type -6 183 75 1554 187 19 29 chr20 27378051 27378366 -44775516 - AluJo SINE Alu 0 312 1 435 279 33 66 chr20 27378366 27378433 -44775449 - MER5A DNA MER1_type -114 75 7 317 315 84 0 chr20 27380320 27380463 -44773419 + L2 LINE L2 2098 2252 -1062 255 318 26 71 chr20 27382036 27382190 -44771692 - MIR SINE MIR -92 170 24 214 195 0 0 chr20 27384317 27384358 -44769524 + GA-rich Low_complexity Low_complexity 2 42 0 193 292 31 31 chr20 27386183 27386279 -44767603 + MIR SINE MIR 133 228 -34 238 341 116 8 chr20 27386685 27386767 -44767115 + MIR SINE MIR 39 141 -121 372 22 0 0 chr20 27386767 27386812 -44767070 + (TTTA)n Simple_repeat Simple_repeat 4 48 0 238 341 116 8 chr20 27386812 27386858 -44767024 + MIR SINE MIR 141 181 -81 248 307 23 0 chr20 27386919 27387007 -44766875 - MARNA DNA Mariner -400 186 97 308 208 0 14 chr20 27387564 27387636 -44766246 - MLT1K LTR MaLR -343 245 175 3297 45 0 5 chr20 27388693 27389074 -44764808 - L1PA5 LINE L1 -1 6153 5775 2593 49 0 0 chr20 27389074 27389381 -44764501 + L1PA5 LINE L1 5476 5782 -373 416 339 47 6 chr20 27390045 27390216 -44763666 - MIR SINE MIR -82 180 3 2643 143 71 22 chr20 27390247 27390751 -44763131 - L1MB7 LINE L1 -19 6165 5637 21 36 0 0 chr20 27390751 27390779 -44763103 + AT_rich Low_complexity Low_complexity 1 28 0 191 309 62 31 chr20 27390808 27390905 -44762977 - L2 LINE L2 -5 3308 3209 516 317 101 59 chr20 27391246 27392039 -44761843 - L2 LINE L2 0 3272 2443 1346 280 132 0 chr20 27392050 27392453 -44761429 + LTR16C LTR ERVL 33 488 -3 254 288 243 32 chr20 27392531 27392844 -44761038 - L2 LINE L2 -909 2405 2027 21 36 0 0 chr20 27393222 27393250 -44760632 + AT_rich Low_complexity Low_complexity 1 28 0 284 333 67 0 chr20 27393928 27394033 -44759849 + MIR SINE MIR 29 140 -122 287 260 14 0 chr20 27394079 27394152 -44759730 + MER116 DNA Mariner 6 79 -1 388 271 14 28 chr20 27394294 27394438 -44759444 + CT-rich Low_complexity Low_complexity 1 142 0 193 286 65 0 chr20 27394523 27394600 -44759282 + MIR SINE MIR 111 192 -70 199 347 28 28 chr20 27394797 27394869 -44759013 + MIR SINE MIR 82 153 -55 230 273 0 0 chr20 27394949 27395004 -44758878 + L1P4 LINE L1 5693 5747 -414 337 268 112 64 chr20 27395021 27395316 -44758566 + L1ME4a LINE L1 5790 6098 -23 280 245 47 28 chr20 27397167 27397273 -44756609 + L1ME4a LINE L1 5837 5944 -177 264 292 133 71 chr20 27397471 27397697 -44756185 + L2 LINE L2 3033 3272 0 186 325 64 45 chr20 27398374 27398531 -44755351 - MER5A DNA MER1_type -28 161 2 189 311 151 57 chr20 27399250 27399356 -44754526 + MIR SINE MIR 16 131 -77 351 0 0 0 chr20 27400018 27400057 -44753825 + (CA)n Simple_repeat Simple_repeat 2 40 0 201 108 0 0 chr20 27400893 27400930 -44752952 + (A)n Simple_repeat Simple_repeat 1 37 0 554 271 96 39 chr20 27401963 27402192 -44751690 - MIR SINE MIR 0 262 21 284 180 16 16 chr20 27402238 27402299 -44751583 - MIR SINE MIR -125 137 77 387 317 12 12 chr20 27403912 27404079 -44749803 - LTR33 LTR ERVL 0 521 355 472 232 96 43 chr20 27404085 27404306 -44749576 - MLT1E1 LTR MaLR -272 321 57 734 253 78 55 chr20 27404592 27404936 -44748946 - LTR16A LTR ERVL -81 369 18 217 217 0 22 chr20 27405619 27405665 -44748217 + GA-rich Low_complexity Low_complexity 2 46 0 184 343 27 0 chr20 27406397 27406470 -44747412 - L2 LINE L2 0 3313 3239 2107 108 3 7 chr20 27406526 27406968 -44746914 + AluSq SINE Alu 1 441 0 385 49 16 16 chr20 27407006 27407067 -44746815 + (GAAA)n Simple_repeat Simple_repeat 3 63 0 201 315 41 0 chr20 27407113 27407186 -44746696 - L2 LINE L2 -227 3086 3011 223 273 136 0 chr20 27407187 27407253 -44746629 - MIR SINE MIR -61 147 73 217 233 0 0 chr20 27407514 27407557 -44746325 + GA-rich Low_complexity Low_complexity 3 45 0 474 252 79 0 chr20 27409230 27409357 -44744525 - MER5B DNA MER1_type -39 139 3 188 217 65 0 chr20 27409423 27409469 -44744413 + L2 LINE L2 3018 3066 -206 423 326 13 35 chr20 27410148 27410375 -44743507 + MIR SINE MIR 31 252 -10 328 320 0 0 chr20 27411092 27411192 -44742690 + (TG)n Simple_repeat Simple_repeat 1 100 0 645 263 68 19 chr20 27411207 27411412 -44742470 - LTR16C LTR ERVL 0 491 277 2264 103 3 3 chr20 27411432 27411733 -44742149 + AluSq SINE Alu 1 301 -12 523 78 0 13 chr20 27412873 27412950 -44740932 + Alu SINE Alu 229 304 -5 465 185 11 0 chr20 27412960 27413052 -44740830 - MER63 DNA MER1_type -829 232 140 4468 162 56 8 chr20 27413057 27413179 -44740703 - L1MA9 LINE L1 -4 6287 6172 204 40 0 0 chr20 27413179 27413204 -44740678 + (TG)n Simple_repeat Simple_repeat 2 26 0 4468 162 56 8 chr20 27413204 27414263 -44739619 - L1MA9 LINE L1 -119 6172 5039 281 128 43 0 chr20 27414282 27414329 -44739553 - MER63 DNA MER1_type -1002 59 11 1459 218 4 0 chr20 27414334 27414591 -44739291 + Tigger7 DNA MER2_type 2 259 -2228 429 225 11 0 chr20 27414592 27414681 -44739201 + Tigger7 DNA MER2_type 2398 2487 0 499 252 14 14 chr20 27414953 27415092 -44738790 + MIR SINE MIR 99 237 -25 438 306 9 0 chr20 27415170 27415281 -44738601 - MIR SINE MIR -69 193 82 294 320 0 0 chr20 27415555 27415677 -44738205 - L1MC4 LINE L1 -3 8039 7918 600 235 231 8 chr20 27415962 27416217 -44737665 - MER46C DNA MER2_type -16 322 11 1919 108 12 0 chr20 27416602 27416893 -44736989 + AluSx SINE Alu 21 314 0 200 114 0 29 chr20 27418683 27418718 -44735164 + (TTTTC)n Simple_repeat Simple_repeat 4 37 0 22 0 0 0 chr20 27420940 27420962 -44732920 + AT_rich Low_complexity Low_complexity 1 22 0 23 54 0 0 chr20 27421071 27421108 -44732774 + AT_rich Low_complexity Low_complexity 1 37 0 1882 165 81 43 chr20 27421891 27422333 -44731549 + L1MB7 LINE L1 5717 6175 -9 191 311 194 29 chr20 27422560 27422663 -44731219 - L2 LINE L2 -49 3223 3104 217 359 107 39 chr20 27422821 27423205 -44730677 + L3 LINE CR1 787 1196 -381 567 321 58 33 chr20 27423243 27423483 -44730399 - MIR SINE MIR -15 247 2 214 356 0 0 chr20 27423598 27423657 -44730225 + L3 LINE CR1 1433 1491 -86 403 341 0 33 chr20 27423741 27423923 -44729959 + MER91B DNA MER1_type 1 176 -14 203 307 86 14 chr20 27424112 27424252 -44729630 - L2 LINE L2 -1042 2272 2123 180 326 132 44 chr20 27424331 27424558 -44729324 - L2 LINE L2 -1363 1951 1705 311 311 87 37 chr20 27425650 27425949 -44727933 - L1ME LINE L1 -312 5809 5496 263 240 0 66 chr20 27426121 27426242 -44727640 - L1ME LINE L1 -2442 5366 5254 336 261 104 71 chr20 27426487 27426722 -44727160 - L1ME LINE L1 -1167 4979 4732 263 53 0 0 chr20 27427423 27427461 -44726421 + L1HS LINE L1 6114 6151 -4 299 276 166 31 chr20 27427582 27427745 -44726137 + MIR3 SINE MIR 15 199 -9 370 214 155 0 chr20 27427884 27427987 -44725895 + L2 LINE L2 3153 3271 -1 24 32 0 0 chr20 27430016 27430047 -44723835 + AT_rich Low_complexity Low_complexity 1 31 0 345 201 39 25 chr20 27430552 27430699 -44723183 - L1ME4a LINE L1 -161 5960 5812 1716 255 13 4 chr20 27432881 27433356 -44720526 - L1MA9 LINE L1 -38 6274 5796 658 117 0 0 chr20 27433357 27433451 -44720431 + AluSc SINE Alu 1 94 -215 1662 188 9 6 chr20 27433452 27433792 -44720090 - L1MA9 LINE L1 -530 5782 5442 1967 151 0 10 chr20 27433878 27434176 -44719706 - AluJb SINE Alu -17 295 1 188 65 0 32 chr20 27434953 27434984 -44718898 + (TTTC)n Simple_repeat Simple_repeat 1 30 0 189 0 0 0 chr20 27437591 27437612 -44716270 + (TGAA)n Simple_repeat Simple_repeat 2 22 0 183 42 0 0 chr20 27438508 27438532 -44715350 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 231 36 0 0 chr20 27438826 27438854 -44715028 + (CA)n Simple_repeat Simple_repeat 2 29 0 1825 184 6 3 chr20 27439673 27440010 -44713872 - MER7A DNA MER2_type -8 338 3 454 185 37 0 chr20 27440437 27440545 -44713337 + MER103 DNA DNA 10 121 -45 312 27 0 0 chr20 27440993 27441030 -44712852 + (GA)n Simple_repeat Simple_repeat 2 38 0 261 286 42 0 chr20 27441459 27441578 -44712304 - L1MC4a LINE L1 -1800 6008 5885 988 247 67 19 chr20 27442670 27442986 -44710896 + MLT1H LTR MaLR 4 334 -215 649 274 90 38 chr20 27442996 27443284 -44710598 - L2 LINE L2 -1235 2079 1777 1706 221 48 76 chr20 27443614 27443981 -44709901 + L1MC4 LINE L1 7323 7668 -374 1074 144 0 0 chr20 27443981 27444161 -44709721 + (TA)n Simple_repeat Simple_repeat 1 180 0 1706 221 48 76 chr20 27444161 27444399 -44709483 + L1MC4 LINE L1 7668 7911 -131 1406 248 55 43 chr20 27444400 27445003 -44708879 + MLT1E3 LTR MaLR 9 619 -5 433 219 9 0 chr20 27445010 27445124 -44708758 + L1MC4 LINE L1 7927 8041 -1 279 0 0 0 chr20 27445139 27445170 -44708712 + (TA)n Simple_repeat Simple_repeat 2 32 0 573 295 67 13 chr20 27445171 27445395 -44708487 - MIR SINE MIR -24 238 3 2143 120 3 10 chr20 27445515 27445814 -44708068 - AluSx SINE Alu -15 297 1 21 0 0 0 chr20 27446397 27446418 -44707464 + AT_rich Low_complexity Low_complexity 1 21 0 261 372 16 23 chr20 27447707 27447836 -44706046 + L2 LINE L2 3145 3272 0 392 266 203 0 chr20 27448065 27448128 -44705754 + MIR SINE MIR 36 85 -177 186 71 0 0 chr20 27448128 27448156 -44705726 + (TTA)n Simple_repeat Simple_repeat 3 30 0 392 266 203 0 chr20 27448156 27448269 -44705613 + MIR SINE MIR 85 248 -14 208 267 93 35 chr20 27448276 27448362 -44705520 + MIR SINE MIR 64 154 -108 468 240 73 22 chr20 27448781 27448960 -44704922 + LTR16A1 LTR ERVL 269 456 -1 376 333 23 0 chr20 27449293 27449425 -44704457 - MIR SINE MIR -70 192 58 215 217 43 0 chr20 27449518 27449564 -44704318 + MER5A DNA MER1_type 47 94 -95 746 176 25 0 chr20 27449631 27449750 -44704132 + FLAM_A SINE Alu 1 122 -11 235 200 15 15 chr20 27449835 27449900 -44703982 + (TA)n Simple_repeat Simple_repeat 2 66 0 339 96 0 0 chr20 27450221 27450273 -44703609 + (TG)n Simple_repeat Simple_repeat 2 53 0 546 222 49 0 chr20 27450273 27450417 -44703465 - LTR16C LTR ERVL -2 489 339 349 317 99 41 chr20 27454668 27454961 -44698921 + MLT1I LTR MaLR 79 388 -21 203 0 37 0 chr20 27455949 27455976 -44697906 + (TG)n Simple_repeat Simple_repeat 1 28 0 23 0 0 0 chr20 27456524 27456547 -44697335 + AT_rich Low_complexity Low_complexity 1 23 0 584 218 0 15 chr20 27456812 27456945 -44696937 - L1PB4 LINE L1 -14 6142 6012 282 301 14 0 chr20 27457488 27457561 -44696321 + Charlie8 DNA MER1_type 1 74 -2343 189 0 0 0 chr20 27457562 27457583 -44696299 + (TTAAA)n Simple_repeat Simple_repeat 2 22 0 3778 171 9 3 chr20 27458158 27458852 -44695030 - L1MB3 LINE L1 -2 6181 5484 258 143 0 0 chr20 27458867 27458916 -44694966 + (TG)n Simple_repeat Simple_repeat 2 50 0 1138 260 52 3 chr20 27458947 27459313 -44694569 - L1MB3 LINE L1 -1071 5075 4692 8298 240 53 29 chr20 27459326 27460979 -44692903 - L1M4 LINE L1 -745 5637 3866 2259 98 10 3 chr20 27460979 27461284 -44692598 - AluSx SINE Alu -5 307 1 8298 240 53 29 chr20 27461284 27462762 -44691120 - L1M4 LINE L1 -2516 3866 2426 232 121 193 0 chr20 27462866 27462949 -44690933 - L1M4 LINE L1 -4030 2354 2256 9859 205 25 29 chr20 27462988 27463792 -44690090 - L1PA16 LINE L1 -9 6157 5351 2147 112 10 3 chr20 27463792 27464087 -44689795 - AluSg SINE Alu -11 299 3 9859 205 25 29 chr20 27464087 27465657 -44688225 - L1PA16 LINE L1 -815 5351 3797 386 91 212 0 chr20 27465657 27465723 -44688159 + MADE1 DNA Mariner 1 80 0 9859 205 25 29 chr20 27465723 27466933 -44686949 - L1PA16 LINE L1 -2369 3797 2583 1313 240 9 7 chr20 27466923 27467510 -44686372 - L1M4 LINE L1 -4119 2265 1585 * 1905 216 144 54 chr20 27467515 27468145 -44685737 - MER21B LTR ERV1 -157 706 20 319 237 13 13 chr20 27468168 27468244 -44685638 - MER21B LTR ERV1 -773 90 15 25 31 0 0 chr20 27468370 27468402 -44685480 + AT_rich Low_complexity Low_complexity 1 32 0 502 260 219 0 chr20 27468657 27468803 -44685079 + MER5A DNA MER1_type 9 186 -3 283 242 197 0 chr20 27469191 27469289 -44684593 + MIR3 SINE MIR 48 158 -50 202 268 122 24 chr20 27469533 27469656 -44684226 - MIR SINE MIR -42 220 86 236 364 43 6 chr20 27470097 27470259 -44683623 - MIR3 SINE MIR -6 202 35 186 188 0 0 chr20 27471697 27471729 -44682153 - L3 LINE CR1 -738 839 808 783 208 18 0 chr20 27472946 27473114 -44680768 + MER58B DNA MER1_type 171 341 0 481 293 61 35 chr20 27473496 27473694 -44680188 - MIR SINE MIR -25 237 35 313 273 34 0 chr20 27473915 27474003 -44679879 + MIR SINE MIR 72 162 -100 334 259 273 7 chr20 27475021 27475160 -44678722 - MER5A DNA MER1_type -5 184 9 192 158 53 123 chr20 27476164 27476221 -44677661 - MIR3 SINE MIR -45 163 111 214 182 0 23 chr20 27476612 27476656 -44677226 - MIR SINE MIR -98 164 122 340 250 0 0 chr20 27477102 27477182 -44676700 + MER116 DNA Mariner 1 80 0 1247 220 115 19 chr20 27477631 27477781 -44676101 - Charlie1b DNA MER1_type -2238 523 389 1954 122 11 0 chr20 27477781 27478091 -44675791 + AluSx SINE Alu 1 313 0 1247 220 115 19 chr20 27478091 27478416 -44675466 - Charlie1b DNA MER1_type -2372 389 1 196 128 106 64 chr20 27478473 27478520 -44675362 - MER5B DNA MER1_type -129 49 1 396 0 0 0 chr20 27479193 27479237 -44674645 + (CA)n Simple_repeat Simple_repeat 1 44 0 2047 112 0 4 chr20 27479279 27479557 -44674325 + AluSg SINE Alu 1 277 -33 389 36 18 0 chr20 27479557 27479612 -44674270 + (CAAAA)n Simple_repeat Simple_repeat 1 56 0 199 330 155 0 chr20 27479839 27479942 -44673940 + L2 LINE L2 3141 3259 -13 225 0 0 0 chr20 27479943 27479968 -44673914 + (TGAA)n Simple_repeat Simple_repeat 2 26 0 288 0 0 0 chr20 27480087 27480119 -44673763 + (TG)n Simple_repeat Simple_repeat 2 33 0 207 229 0 0 chr20 27480383 27480444 -44673438 + (TG)n Simple_repeat Simple_repeat 1 61 0 575 254 161 19 chr20 27480446 27480753 -44673129 - L1MC4 LINE L1 -97 7711 7453 1715 115 64 45 chr20 27481293 27481605 -44672277 - L1MC2 LINE L1 -9 6335 6018 867 189 59 13 chr20 27481611 27481764 -44672118 + FRAM SINE Alu 6 165 -11 2501 158 18 47 chr20 27481769 27482264 -44671618 - L1MC2 LINE L1 -316 6028 5548 743 229 251 3 chr20 27482296 27482619 -44671263 - LTR50 LTR ERVL -390 405 3 25 31 0 0 chr20 27483721 27483753 -44670129 + AT_rich Low_complexity Low_complexity 1 32 0 2134 204 28 9 chr20 27483964 27484482 -44669400 - L1MA9 LINE L1 -138 6196 5668 242 290 97 21 chr20 27484740 27484796 -44669086 + L2 LINE L2 3202 3269 -44 1012 241 156 30 chr20 27484796 27485232 -44668650 + MER110 LTR ERV1 1 491 0 242 290 97 21 chr20 27485232 27485268 -44668614 + L2 LINE L2 3269 3301 -12 441 307 7 7 chr20 27485340 27485477 -44668405 + MIR SINE MIR 56 192 -70 260 273 8 0 chr20 27486387 27486519 -44667363 + GA-rich Low_complexity Low_complexity 3 135 0 * 282 125 0 0 chr20 27486508 27486556 -44667326 + (GGGA)n Simple_repeat Simple_repeat 2 49 0 2094 98 70 0 chr20 27487200 27487485 -44666397 - AluSx SINE Alu -7 305 1 390 139 14 14 chr20 27488777 27488849 -44665033 - MER58 DNA MER1_type -31 2389 2318 241 292 31 21 chr20 27488851 27488947 -44664935 - MER58 DNA MER1_type -238 103 7 347 314 59 29 chr20 27489382 27489586 -44664296 - L2 LINE L2 0 3313 3104 338 270 18 18 chr20 27490415 27490526 -44663356 + MIR SINE MIR 25 135 -127 391 252 98 42 chr20 27490587 27490730 -44663152 + MER5B DNA MER1_type 25 175 -3 929 151 0 6 chr20 27491980 27492139 -44661743 - L1MA7 LINE L1 0 6291 6134 742 133 33 53 chr20 27492157 27492307 -44661575 - L1MA7 LINE L1 -243 6048 5902 * 3513 155 13 24 chr20 27492303 27492707 -44661175 + L1MA7 LINE L1 5087 5494 -797 2184 127 0 16 chr20 27492707 27493022 -44660860 + AluSx SINE Alu 1 310 -2 3513 155 13 24 chr20 27493022 27493451 -44660431 + L1MA7 LINE L1 5494 5911 -380 2393 150 25 3 chr20 27493555 27493909 -44659973 - THE1B LTR MaLR 0 364 3 942 35 0 0 chr20 27494656 27494770 -44659112 + (TA)n Simple_repeat Simple_repeat 2 115 0 1885 126 28 3 chr20 27494770 27495056 -44658826 - AluSx SINE Alu -19 293 1 233 277 59 20 chr20 27495286 27495387 -44658495 + MER5B DNA MER1_type 70 174 -4 * 251 335 161 7 chr20 27495370 27495525 -44658357 - MIR3 SINE MIR -19 189 11 188 194 28 0 chr20 27499750 27499786 -44654096 - L2 LINE L2 -20 3252 3216 303 281 55 16 chr20 27499789 27499917 -44653965 - MIR SINE MIR -89 173 41 228 35 0 0 chr20 27500068 27500097 -44653785 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 306 294 289 0 chr20 27501206 27501441 -44652441 - Charlie2 DNA MER1_type -2559 303 1 495 299 76 5 chr20 27501976 27502173 -44651709 - MIR SINE MIR -12 250 40 256 291 45 9 chr20 27502389 27502499 -44651383 - L2 LINE L2 -14 3299 3186 185 191 0 21 chr20 27503059 27503106 -44650776 + CT-rich Low_complexity Low_complexity 2 47 0 741 181 42 0 chr20 27503238 27503382 -44650500 + MLT1B LTR MaLR 240 389 -1 751 258 67 0 chr20 27503388 27503597 -44650285 - L1MC4a LINE L1 -966 6842 6620 1856 147 27 0 chr20 27504540 27504839 -44649043 + AluJb SINE Alu 1 307 -5 2078 113 0 35 chr20 27505042 27505360 -44648522 - AluSx SINE Alu -5 307 1 292 267 86 9 chr20 27506115 27506220 -44647662 - MER5B DNA MER1_type 0 178 66 181 222 32 0 chr20 27506376 27506439 -44647443 + GA-rich Low_complexity Low_complexity 2 66 0 217 229 49 16 chr20 27506606 27506667 -44647215 - MIR SINE MIR -172 90 28 188 200 18 0 chr20 27507386 27507441 -44646441 + CT-rich Low_complexity Low_complexity 1 56 0 418 219 102 7 chr20 27507655 27507792 -44646090 + L1ME3A LINE L1 6020 6169 -1 186 304 43 33 chr20 27507870 27507962 -44645920 - MIR SINE MIR -131 131 39 1264 240 133 7 chr20 27508779 27509200 -44644682 - L1MC4 LINE L1 -209 7833 7360 275 49 24 0 chr20 27510043 27510084 -44643798 + (TG)n Simple_repeat Simple_repeat 1 42 0 2269 133 80 0 chr20 27510234 27510571 -44643311 + THE1B LTR MaLR 1 364 0 26 30 0 0 chr20 27511294 27511327 -44642555 + AT_rich Low_complexity Low_complexity 1 33 0 208 241 11 81 chr20 27511655 27511742 -44642140 + MER5A DNA MER1_type 91 171 -18 449 261 0 27 chr20 27511962 27512073 -44641809 - MER8 DNA MER2_type -126 113 6 24 32 0 0 chr20 27512213 27512244 -44641638 + AT_rich Low_complexity Low_complexity 1 31 0 2049 140 0 31 chr20 27512439 27512760 -44641122 + AluJb SINE Alu 1 311 -1 25 0 0 0 chr20 27513019 27513044 -44640838 + AT_rich Low_complexity Low_complexity 1 25 0 28 29 0 0 chr20 27513197 27513232 -44640650 + AT_rich Low_complexity Low_complexity 1 35 0 634 299 62 61 chr20 27513763 27513956 -44639926 + L1ME3A LINE L1 4747 4938 -1232 1621 206 30 43 chr20 27513956 27514324 -44639558 - MLT1A1 LTR MaLR -2 363 1 634 299 62 61 chr20 27514324 27515288 -44638594 + L1ME3A LINE L1 4938 5889 -281 21 0 0 0 chr20 27515596 27515617 -44638265 + AT_rich Low_complexity Low_complexity 1 21 0 462 301 53 29 chr20 27517788 27517997 -44635885 + MIR SINE MIR 23 236 -26 488 329 151 19 chr20 27518511 27518836 -44635046 - L2 LINE L2 0 3313 2946 786 227 38 108 chr20 27519949 27520134 -44633748 + MER5A DNA MER1_type 2 173 -5 619 366 133 29 chr20 27520327 27520665 -44633217 + L3 LINE CR1 445 746 -831 198 0 0 0 chr20 27520665 27520687 -44633195 + (TA)n Simple_repeat Simple_repeat 2 23 0 619 366 133 29 chr20 27520687 27521309 -44632573 + L3 LINE CR1 746 1505 -72 209 178 67 0 chr20 27521418 27521463 -44632419 - L2 LINE L2 -15 3257 3210 * 981 218 64 0 chr20 27521429 27521649 -44632233 - MIR SINE MIR -21 241 8 189 121 0 0 chr20 27521733 27521766 -44632116 + (CATATA)n Simple_repeat Simple_repeat 3 35 0 194 313 141 0 chr20 27522118 27522182 -44631700 + L3 LINE CR1 501 573 -1004 4003 158 20 16 chr20 27522377 27523079 -44630803 + L1MB3 LINE L1 5476 6180 -3 4437 33 0 0 chr20 27523086 27523607 -44630275 - L1PA3 LINE L1 -879 5267 4747 7614 28 19 0 chr20 27523607 27524460 -44629422 + L1PA3 LINE L1 5286 6154 -1 210 37 0 0 chr20 27524480 27524507 -44629375 + (A)n Simple_repeat Simple_repeat 1 27 0 1271 189 40 4 chr20 27524516 27524744 -44629138 + MER46A DNA MER2_type 1 236 0 2281 72 0 36 chr20 27525528 27525834 -44628048 + AluY SINE Alu 2 296 -15 391 175 0 0 chr20 27527609 27527672 -44626210 - MER3 DNA MER1_type -2 207 145 2438 124 16 32 chr20 27527776 27528146 -44625736 - THE1B LTR MaLR 0 364 1 552 211 23 23 chr20 27528162 27528290 -44625592 - MER3 DNA MER1_type -81 128 1 246 329 49 12 chr20 27528290 27528372 -44625510 - MIR SINE MIR -93 169 85 323 339 30 24 chr20 27528960 27529125 -44624757 + LTR16C LTR ERVL 1 166 -325 500 322 38 28 chr20 27529172 27529294 -44624588 + LTR16C LTR ERVL 246 372 -119 2527 114 5 40 chr20 27529294 27529671 -44624211 - THE1B LTR MaLR 0 364 1 500 322 38 28 chr20 27529671 27529759 -44624123 + LTR16C LTR ERVL 372 458 -33 186 374 114 8 chr20 27529892 27530023 -44623859 - MIR SINE MIR -67 195 51 183 80 0 0 chr20 27530271 27530296 -44623586 + (T)n Simple_repeat Simple_repeat 1 25 0 1839 186 32 18 chr20 27631741 27632080 -44521802 + MER2 DNA MER2_type 1 344 0 232 228 105 9 chr20 27632534 27632648 -44521234 - Charlie7 DNA MER1_type -51 2561 2437 * 347 188 10 89 chr20 27632621 27632722 -44521160 - Charlie7 DNA MER1_type -2498 114 22 22 0 0 0 chr20 27633676 27633698 -44520184 + AT_rich Low_complexity Low_complexity 1 22 0 1674 177 23 19 chr20 27633738 27634048 -44519834 - AluJo SINE Alu -1 311 1 1663 176 7 10 chr20 27634665 27634966 -44518916 - AluJb SINE Alu -12 300 1 311 290 64 24 chr20 27635842 27636008 -44517874 + LTR16B LTR ERVL 264 450 -2 222 37 0 0 chr20 27639226 27639253 -44514629 + (TG)n Simple_repeat Simple_repeat 2 28 0 331 343 76 17 chr20 27641431 27641667 -44512215 - L3 LINE CR1 -1120 457 208 295 238 36 0 chr20 27643000 27643084 -44510798 + L2 LINE L2 3226 3312 -1 1339 301 31 0 chr20 27643966 27644358 -44509524 - LTR16C LTR ERVL 0 491 88 393 281 194 29 chr20 27647739 27648156 -44505726 + L2 LINE L2 2369 2854 -460 414 293 105 68 chr20 27648219 27648646 -44505236 + L2 LINE L2 2871 3313 0 235 285 89 28 chr20 27648676 27648855 -44505027 - L1P5 LINE L1 -692 5459 5270 512 257 112 57 chr20 27649131 27649621 -44504261 + L1MC5 LINE L1 7261 7777 -184 330 26 0 0 chr20 27649924 27649963 -44503919 + (TG)n Simple_repeat Simple_repeat 2 40 0 1396 174 8 12 chr20 27650357 27650599 -44503283 + AluJo SINE Alu 1 241 -71 182 37 37 0 chr20 27650600 27650627 -44503255 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 485 192 102 4 chr20 27650717 27650859 -44503023 + MER33 DNA MER1_type 37 164 -2460 413 0 39 0 chr20 27650859 27650911 -44502971 + (TTTTA)n Simple_repeat Simple_repeat 4 57 0 1909 129 4 4 chr20 27650911 27651191 -44502691 - AluSx SINE Alu -32 280 1 485 192 102 4 chr20 27651191 27651272 -44502610 + MER33 DNA MER1_type 163 363 0 518 289 103 92 chr20 27651466 27652091 -44501791 - HAL1 LINE L1 -1014 1493 859 2376 69 0 25 chr20 27652091 27652410 -44501472 - AluY SINE Alu 0 311 1 518 289 103 92 chr20 27652410 27652427 -44501455 - HAL1 LINE L1 -1648 859 844 218 405 8 8 chr20 27652820 27652951 -44500931 + L2 LINE L2 2961 3091 -181 290 149 0 0 chr20 27653162 27653209 -44500673 + L1MA5 LINE L1 6250 6296 -4 189 0 0 0 chr20 27653532 27653553 -44500329 + (CCA)n Simple_repeat Simple_repeat 1 21 0 1062 306 50 3 chr20 27654093 27654436 -44499446 - LTR16C LTR ERVL -31 460 102 22 99 0 0 chr20 27654522 27654593 -44499289 + AT_rich Low_complexity Low_complexity 1 71 0 240 339 34 51 chr20 27654809 27654986 -44498896 + MIR3 SINE MIR 30 203 -5 234 0 0 0 chr20 27655254 27655280 -44498602 + (T)n Simple_repeat Simple_repeat 1 26 0 247 130 37 0 chr20 27655416 27655470 -44498412 - L1MB2 LINE L1 -2 6169 6114 * 604 157 10 0 chr20 27655465 27655567 -44498315 - L1MB2 LINE L1 -345 5838 5736 217 298 0 0 chr20 27655763 27655820 -44498062 - MIR SINE MIR -6 256 200 1804 175 21 6 chr20 27655846 27656177 -44497705 + L1MA5 LINE L1 5965 6300 0 22 35 0 0 chr20 27656995 27657024 -44496858 + AT_rich Low_complexity Low_complexity 1 29 0 244 277 121 7 chr20 27657586 27657727 -44496155 - LTR16A LTR ERVL -188 262 106 2444 231 63 27 chr20 27658891 27659513 -44494369 + MER82 DNA MER2_type 9 652 -1 328 296 119 57 chr20 27659936 27660254 -44493628 - L1MC4a LINE L1 -1925 5883 5546 353 234 137 24 chr20 27660438 27660562 -44493320 + MIR SINE MIR 101 238 -24 692 110 0 8 chr20 27661751 27661869 -44492013 + (TAGA)n Simple_repeat Simple_repeat 2 118 0 26 0 0 0 chr20 27661889 27661915 -44491967 + AT_rich Low_complexity Low_complexity 1 26 0 406 254 18 27 chr20 27664174 27664284 -44489598 + MER5A DNA MER1_type 39 147 -42 649 250 45 35 chr20 27664294 27664630 -44489252 + LTR16A LTR ERVL 21 420 -30 731 254 141 71 chr20 27665083 27665517 -44488365 + MLT1F1 LTR MaLR 37 541 -8 195 246 0 0 chr20 27665586 27665643 -44488239 + (TA)n Simple_repeat Simple_repeat 2 58 0 1766 115 4 4 chr20 27665939 27666183 -44487699 + AluSq SINE Alu 1 244 -69 1641 202 25 27 chr20 27666316 27666683 -44487199 - MLT1A2 LTR MaLR -8 366 1 198 128 128 21 chr20 27667215 27667262 -44486620 - MIR SINE MIR -136 72 21 215 178 0 22 chr20 27668160 27668205 -44485677 + (TA)n Simple_repeat Simple_repeat 2 45 0 21 0 0 0 chr20 27668709 27668730 -44485152 + AT_rich Low_complexity Low_complexity 1 21 0 356 317 6 18 chr20 27668813 27668980 -44484902 + (TATG)n Simple_repeat Simple_repeat 3 167 0 309 344 85 68 chr20 27669233 27669657 -44484225 - L2 LINE L2 0 3272 2842 225 240 0 0 chr20 27670378 27670453 -44483429 + (TG)n Simple_repeat Simple_repeat 2 76 0 21 0 0 0 chr20 27670952 27670973 -44482909 + AT_rich Low_complexity Low_complexity 1 21 0 250 286 10 0 chr20 27671151 27671249 -44482633 - LTR33 LTR ERVL -115 406 308 407 244 173 19 chr20 27671299 27671455 -44482427 - LTR33 LTR ERVL -300 221 42 511 359 49 11 chr20 27671777 27672145 -44481737 - LTR16B LTR ERVL -7 457 76 1831 257 74 4 chr20 27673072 27673531 -44480351 - MER110 LTR ERV1 0 491 1 2902 143 31 4 chr20 27673608 27674091 -44479791 - L1MC3 LINE L1 -1 7784 7289 1933 159 28 0 chr20 27674091 27674412 -44479470 - MER46B DNA MER2_type 0 236 32 583 179 36 0 chr20 27674429 27674541 -44479341 - L1MC3 LINE L1 -495 7290 7175 240 313 0 0 chr20 27674541 27674608 -44479274 - MLT1F1 LTR MaLR -456 111 45 2214 171 16 25 chr20 27674608 27675047 -44478835 - L1MC3 LINE L1 -678 7107 6673 2364 138 44 20 chr20 27675266 27675427 -44478455 + MSTA LTR MaLR 13 169 -259 2132 110 0 7 chr20 27675427 27675739 -44478143 - AluSq SINE Alu 0 313 1 2364 138 44 20 chr20 27675739 27675983 -44477899 + MSTA LTR MaLR 169 428 0 2174 177 52 55 chr20 27677302 27677721 -44476161 - MER47B DNA MER2_type 0 418 1 1686 260 43 9 chr20 27677827 27678289 -44475593 + MER110 LTR ERV1 14 491 0 1078 249 73 18 chr20 27680797 27681179 -44472703 + L1ME3A LINE L1 5759 6161 -9 322 314 25 8 chr20 27682319 27682440 -44471442 - L2 LINE L2 -1 3271 3149 2106 217 26 12 chr20 27682963 27683387 -44470495 - MER63C DNA MER1_type -255 675 246 289 294 34 34 chr20 27683272 27683418 -44470464 + MER63C DNA MER1_type 244 389 -541 * 1935 133 0 31 chr20 27683441 27683734 -44470148 + AluSx SINE Alu 1 284 -28 200 188 0 0 chr20 27884233 27884265 -44269617 + polypurine Low_complexity Low_complexity 5 36 0 319 290 11 0 chr20 27884670 27884763 -44269119 - MER117 DNA MER1_type -53 144 51 483 273 102 57 chr20 27885100 27885434 -44268448 + LTR16A1 LTR ERVL 98 423 -34 247 316 13 0 chr20 27886158 27886234 -44267648 - MARNA DNA Mariner -42 544 468 1850 204 31 60 chr20 27887284 27887804 -44266078 - MLT1D LTR MaLR 0 505 1 13426 141 13 4 chr20 27887869 27890082 -44263800 + L1PA11 LINE L1 2706 4938 -1208 6304 87 22 15 chr20 27890083 27891031 -44262851 + L1PA11 LINE L1 5217 6170 -4 493 215 57 96 chr20 27891593 27891802 -44262080 - LTR16A1 LTR ERVL -13 444 244 390 57 0 0 chr20 27892418 27892471 -44261411 + (CA)n Simple_repeat Simple_repeat 2 54 0 294 239 76 43 chr20 27893016 27893108 -44260774 - MLT1J LTR MaLR 0 511 417 455 307 36 26 chr20 27893255 27893447 -44260435 - MLT1J LTR MaLR -317 194 1 663 266 82 30 chr20 27893689 27893994 -44259888 + LTR16A LTR ERVL 117 437 -13 258 223 147 58 chr20 27894215 27894378 -44259504 + MIR SINE MIR 6 201 -61 628 229 42 57 chr20 27894829 27895021 -44258861 + MER5A DNA MER1_type 1 189 0 253 286 14 0 chr20 27895091 27895161 -44258721 + CT-rich Low_complexity Low_complexity 2 72 0 2198 127 0 0 chr20 27895786 27896093 -44257789 + AluSx SINE Alu 1 307 -5 3571 206 83 19 chr20 27896885 27897747 -44256135 - L1MD1 LINE L1 -20 6222 5305 737 139 33 0 chr20 27897751 27897873 -44256009 - AluSg/x SINE Alu -18 294 169 7965 258 27 9 chr20 27897873 27900399 -44253483 - L1MD1 LINE L1 -864 5282 2713 273 215 63 0 chr20 27900416 27900495 -44253387 - L1 LINE L1 -2874 3272 3189 222 37 0 0 chr20 27900601 27900628 -44253254 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 2084 100 0 0 chr20 27902829 27903099 -44250783 - AluSg SINE Alu -3 307 38 2015 141 12 3 chr20 27904246 27904579 -44249303 + L1MA3 LINE L1 5970 6305 0 841 272 77 17 chr20 27904967 27905265 -44248617 - LTR16C LTR ERVL -30 461 146 490 284 25 0 chr20 27905914 27906076 -44247806 + MER5A DNA MER1_type 18 183 -6 25 0 0 0 chr20 27906258 27906283 -44247599 + AT_rich Low_complexity Low_complexity 1 25 0 439 270 37 2 chr20 27906831 27907074 -44246808 - LTR16A LTR ERVL 0 450 158 1402 230 36 45 chr20 27907536 27907983 -44245899 + L1ME2 LINE L1 5712 6154 -10 274 287 97 10 chr20 27908017 27908212 -44245670 + L1MC4 LINE L1 7827 8038 -4 2236 196 25 12 chr20 27909118 27909597 -44244285 - L1P LINE L1 -1214 4932 4448 3308 143 14 18 chr20 27909597 27910167 -44243715 + L1PA16 LINE L1 5595 6165 -1 386 278 90 0 chr20 27910357 27910490 -44243392 - MIR SINE MIR -13 249 105 207 268 49 0 chr20 27910567 27910649 -44243233 + MIR SINE MIR 107 192 -70 281 253 13 12 chr20 27912346 27912438 -44241444 + MIR SINE MIR 22 105 -103 805 275 92 35 chr20 27912926 27913436 -44240446 + MLT2E LTR ERVL 1 605 -23 511 183 21 0 chr20 27914969 27915062 -44238820 - MER3 DNA MER1_type -100 109 15 1172 28 7 0 chr20 27916589 27916733 -44237149 + (TTTC)n Simple_repeat Simple_repeat 2 146 0 2399 39 0 11 chr20 27916735 27917017 -44236865 - AluY SINE Alu -32 279 1 22 0 0 0 chr20 27917076 27917098 -44236784 + AT_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr20 27917219 27917248 -44236634 + AT_rich Low_complexity Low_complexity 1 29 0 22 70 0 0 chr20 27917704 27917747 -44236135 + AT_rich Low_complexity Low_complexity 1 43 0 198 254 141 0 chr20 27917752 27917823 -44236059 - MIR3 SINE MIR -23 185 105 1818 162 27 0 chr20 27917958 27918254 -44235628 + AluJo SINE Alu 1 304 -8 27 29 0 0 chr20 27918330 27918364 -44235518 + AT_rich Low_complexity Low_complexity 1 34 0 192 264 56 0 chr20 27919704 27919776 -44234106 - L2 LINE L2 0 3313 3238 567 205 96 6 chr20 27920041 27920197 -44233685 - MER5B DNA MER1_type -6 172 3 1346 211 48 56 chr20 27920830 27921212 -44232670 + L1M4 LINE L1 5414 5794 -370 2471 46 0 0 chr20 27922036 27922338 -44231544 + AluY SINE Alu 1 302 0 252 143 0 0 chr20 27922573 27922615 -44231267 + (TG)n Simple_repeat Simple_repeat 2 43 0 600 144 162 9 chr20 27922628 27922739 -44231143 - FLAM_C SINE Alu -14 129 2 1024 114 0 10 chr20 27924213 27924418 -44229464 + (TC)n Simple_repeat Simple_repeat 1 202 0 442 291 71 71 chr20 27925043 27925425 -44228457 - L1M4 LINE L1 -2988 3158 2777 1639 162 92 0 chr20 27925521 27925879 -44228003 - Charlie5 DNA MER1_type 0 2624 2234 580 110 92 9 chr20 27925880 27925989 -44227893 - Charlie5 DNA MER1_type -2488 124 7 1769 210 3 0 chr20 27927094 27927432 -44226450 + L1PB4 LINE L1 5818 6156 0 208 147 0 0 chr20 27927442 27927476 -44226406 + (A)n Simple_repeat Simple_repeat 1 34 0 1973 154 3 3 chr20 27927486 27927798 -44226084 - AluSx SINE Alu 0 312 1 890 189 98 7 chr20 27928691 27928963 -44224919 + MER33 DNA MER1_type 1 262 -62 2165 121 0 0 chr20 27929117 27929406 -44224476 - AluSx SINE Alu -23 289 1 724 272 123 33 chr20 27929595 27929987 -44223895 - L2 LINE L2 -144 3169 2814 2082 97 7 4 chr20 27929987 27930288 -44223594 + AluSc SINE Alu 1 302 0 724 272 123 33 chr20 27930288 27930525 -44223357 - L2 LINE L2 -499 2814 2423 293 371 52 31 chr20 27930883 27931365 -44222517 - L2 LINE L2 -442 2872 2381 421 306 127 4 chr20 27931392 27931621 -44222261 - LTR16C LTR ERVL 0 491 235 2214 106 3 0 chr20 27932150 27932461 -44221421 - AluSq SINE Alu 0 312 1 2319 111 0 13 chr20 27932486 27932802 -44221080 + AluSq SINE Alu 1 312 -1 1470 141 137 22 chr20 27932868 27933138 -44220744 + AluJo SINE Alu 1 301 -1 1970 123 0 0 chr20 27933198 27933467 -44220415 - AluSx SINE Alu -43 269 1 205 345 52 10 chr20 27933752 27933879 -44220003 + MIR SINE MIR 32 137 -71 293 249 182 42 chr20 27935349 27935514 -44218368 + MIR SINE MIR 28 215 -47 26 0 0 0 chr20 27936154 27936180 -44217702 + AT_rich Low_complexity Low_complexity 1 26 0 1904 177 0 13 chr20 27936540 27936856 -44217026 + AluJb SINE Alu 1 312 0 1577 185 31 3 chr20 27937433 27937725 -44216157 + AluJo SINE Alu 1 300 -12 333 159 0 16 chr20 27937725 27937788 -44216094 + GA-rich Low_complexity Low_complexity 1 62 0 490 126 11 11 chr20 27937788 27937883 -44215999 + (GGAA)n Simple_repeat Simple_repeat 3 97 0 2082 120 14 0 chr20 27938508 27938784 -44215098 + AluSx SINE Alu 1 280 -32 435 38 0 0 chr20 27938784 27938837 -44215045 + (GAAAA)n Simple_repeat Simple_repeat 3 55 0 195 295 29 48 chr20 27938970 27939075 -44214807 + MIR SINE MIR 62 164 -98 2334 91 0 22 chr20 27939383 27939701 -44214181 - AluY SINE Alu 0 311 1 524 260 0 26 chr20 27941263 27941417 -44212465 - MIR SINE MIR -5 257 108 21 0 0 0 chr20 27942842 27942863 -44211019 + AT_rich Low_complexity Low_complexity 1 21 0 303 182 23 11 chr20 27942888 27942976 -44210906 + GA-rich Low_complexity Low_complexity 2 90 0 337 279 90 0 chr20 27943277 27943388 -44210494 + MER103 DNA DNA 45 165 -1 261 203 31 36 chr20 27943653 27943739 -44210143 + MIR SINE MIR 33 116 -92 1236 253 172 33 chr20 27943781 27944299 -44209583 - MLT1E LTR MaLR -3 590 1 538 271 144 6 chr20 27944640 27944821 -44209061 - MIR SINE MIR -41 221 16 260 364 29 0 chr20 27946307 27946447 -44207435 + MIR SINE MIR 46 189 -73 302 197 15 15 chr20 27947070 27947136 -44206746 + MIR SINE MIR 77 142 -66 519 237 79 20 chr20 27947624 27947776 -44206106 - MIR SINE MIR -15 247 87 387 343 129 11 chr20 27947831 27948476 -44205406 + L2 LINE L2 2175 2895 -419 189 296 86 0 chr20 27948539 27948620 -44205262 - MIR SINE MIR -71 191 104 427 350 13 30 chr20 27949219 27949453 -44204429 - MIR SINE MIR -6 256 27 1472 174 87 10 chr20 27949468 27949756 -44204126 - AluJo SINE Alu -2 310 1 1440 47 3 3 chr20 27949881 27950177 -44203705 + (TTC)n Simple_repeat Simple_repeat 1 296 0 2863 210 108 31 chr20 27950459 27951615 -44202267 + L1ME1 LINE L1 4934 6163 -3 1219 259 100 24 chr20 27952450 27952948 -44200934 + L1MC4 LINE L1 7366 7901 -141 6211 118 4 0 chr20 27953428 27954410 -44199472 - L1PA15 LINE L1 -6 6159 5174 393 248 128 17 chr20 27954643 27954760 -44199122 - MLT1J2 LTR MaLR -34 416 287 597 273 94 49 chr20 27954883 27954932 -44198950 + MLT1G1 LTR MaLR 48 93 -502 1764 178 0 3 chr20 27954932 27955243 -44198639 + AluJb SINE Alu 1 310 0 597 273 94 49 chr20 27955243 27955625 -44198257 + MLT1G1 LTR MaLR 93 595 0 315 312 214 9 chr20 27955757 27955972 -44197910 - LTR33 LTR ERVL 0 521 263 417 156 0 0 chr20 27956207 27956284 -44197598 + (CAT)n Simple_repeat Simple_repeat 3 79 0 2212 120 0 7 chr20 27956696 27956995 -44196887 + AluSq SINE Alu 1 297 -16 199 366 73 26 chr20 27957014 27957205 -44196677 - L2 LINE L2 -405 2909 2710 250 325 0 0 chr20 27957462 27957542 -44196340 - L2 LINE L2 -13 3300 3221 201 260 13 39 chr20 27957608 27957685 -44196197 + L2 LINE L2 2936 3010 -262 240 317 50 68 chr20 27958131 27958352 -44195530 + MIR SINE MIR 23 239 -23 600 228 111 11 chr20 27958635 27958824 -44195058 - L2 LINE L2 0 3313 3106 27 0 0 0 chr20 27959083 27959110 -44194772 + AT_rich Low_complexity Low_complexity 1 27 0 1936 130 103 30 chr20 27959412 27959751 -44194131 - THE1B LTR MaLR 0 364 1 11814 88 5 45 chr20 27959751 27961397 -44192485 - THE1B-int LTR MaLR 0 1580 1 1921 145 111 15 chr20 27961397 27961729 -44192153 - THE1B LTR MaLR 0 364 1 355 272 73 22 chr20 27962074 27962210 -44191672 + MIR SINE MIR 118 260 -2 228 86 0 0 chr20 27962641 27962676 -44191206 + (CA)n Simple_repeat Simple_repeat 2 36 0 26 50 0 0 chr20 27962742 27962782 -44191100 + AT_rich Low_complexity Low_complexity 1 40 0 379 294 50 6 chr20 27962831 27963011 -44190871 - MIR SINE MIR 0 262 75 1191 183 0 0 chr20 27963170 27963372 -44190510 + AluJb SINE Alu 87 288 -24 398 228 25 0 chr20 27963717 27963796 -44190086 - AluJo SINE Alu -1 301 221 521 171 63 18 chr20 27963796 27963907 -44189975 - AluJo SINE Alu -124 188 73 1120 230 68 64 chr20 27964769 27964964 -44188918 - L1MC5 LINE L1 -66 7895 7702 2027 108 0 0 chr20 27964964 27965224 -44188658 + AluSc SINE Alu 38 297 -12 1120 230 68 64 chr20 27965224 27965619 -44188263 - L1MC5 LINE L1 -259 7702 7303 264 30 0 0 chr20 27965994 27966027 -44187855 + (CAAA)n Simple_repeat Simple_repeat 1 33 0 891 210 0 0 chr20 27966035 27966197 -44187685 + FRAM SINE Alu 1 161 -15 285 29 0 0 chr20 27968461 27968495 -44185387 + (TG)n Simple_repeat Simple_repeat 1 34 0 183 162 0 0 chr20 27971678 27971715 -44182167 + (CA)n Simple_repeat Simple_repeat 2 38 0 784 0 0 20 chr20 27972890 27972988 -44180894 + (GAAA)n Simple_repeat Simple_repeat 3 98 0 200 114 0 29 chr20 27977789 27977824 -44176058 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 30 27 0 0 chr20 27981752 27981789 -44172093 + AT_rich Low_complexity Low_complexity 1 37 0 349 20 20 20 chr20 27982532 27982583 -44171299 + (TG)n Simple_repeat Simple_repeat 1 51 0 202 215 0 62 chr20 27984412 27984477 -44169405 + MIR SINE MIR 79 139 -123 27 87 0 0 chr20 27989487 27989556 -44164326 + GC_rich Low_complexity Low_complexity 1 69 0 22 35 0 0 chr20 27989757 27989786 -44164096 + AT_rich Low_complexity Low_complexity 1 29 0 188 139 56 0 chr20 27992099 27992135 -44161747 + L2 LINE L2 1971 2008 -1306 180 77 0 0 chr20 27993054 27993080 -44160802 + (TGG)n Simple_repeat Simple_repeat 1 26 0 251 266 0 0 chr20 27995384 27995448 -44158434 + CT-rich Low_complexity Low_complexity 6 69 0 536 69 0 11 chr20 27995649 27995736 -44158146 + (GGA)n Simple_repeat Simple_repeat 1 86 0 195 42 0 0 chr20 27997544 27997568 -44156314 + (CA)n Simple_repeat Simple_repeat 2 25 0 2131 112 3 0 chr20 27999172 27999476 -44154406 + AluSq SINE Alu 1 305 -8 259 143 0 0 chr20 28001113 28001155 -44152727 - L2 LINE L2 -4 3309 3268 447 220 213 35 chr20 28001820 28001961 -44151921 - MER5A DNA MER1_type -8 181 16 274 242 0 16 chr20 28004185 28004247 -44149635 + (TG)n Simple_repeat Simple_repeat 1 61 0 243 170 0 0 chr20 28005610 28005657 -44148225 + (TGGA)n Simple_repeat Simple_repeat 1 47 0 624 267 121 0 chr20 28005753 28005985 -44147897 - MER112 DNA MER1_type 0 260 1 432 277 15 22 chr20 28006029 28006166 -44147716 + MIR SINE MIR 117 252 -10 422 250 9 18 chr20 28007437 28007549 -44146333 - LTR16A1 LTR ERVL 0 457 347 854 296 73 14 chr20 28008523 28008881 -44145001 + LTR16A LTR ERVL 64 442 -8 1699 257 44 2 chr20 28009105 28009513 -44144369 - LTR16C LTR ERVL 0 491 67 1969 80 0 4 chr20 28009812 28010074 -44143808 + AluY SINE Alu 1 261 -50 1737 153 7 27 chr20 28010295 28010451 -44143431 - AluSx SINE Alu -17 295 137 369 0 0 0 chr20 28010451 28010492 -44143390 + (TTTA)n Simple_repeat Simple_repeat 3 43 0 2056 112 0 20 chr20 28010493 28010788 -44143094 - AluSp SINE Alu -24 289 1 1737 153 7 27 chr20 28010788 28010930 -44142952 - AluSx SINE Alu -174 138 1 34 0 0 0 chr20 28010935 28010969 -44142913 + AT_rich Low_complexity Low_complexity 1 34 0 527 316 53 27 chr20 28012777 28013002 -44140880 + MIR SINE MIR 6 236 -26 243 0 0 0 chr20 28013451 28013478 -44140404 + (T)n Simple_repeat Simple_repeat 1 27 0 274 361 27 10 chr20 28013542 28013668 -44140214 + MIR SINE MIR 20 145 -84 239 206 7 184 chr20 28014018 28014159 -44139723 + MER5B DNA MER1_type 38 153 -25 * 451 202 9 73 chr20 28014081 28014190 -44139692 - MER5A DNA MER1_type -83 106 5 1912 133 122 20 chr20 28015622 28015976 -44137906 + MLT1B LTR MaLR 1 390 0 222 307 131 68 chr20 28016278 28016630 -44137252 - L2 LINE L2 -341 2973 2600 1438 207 0 16 chr20 28019753 28020062 -44133820 - AluJo SINE Alu -8 304 1 692 296 174 9 chr20 28020153 28020572 -44133310 + L1MC4a LINE L1 5416 5903 -1905 25 51 0 0 chr20 28020740 28020779 -44133103 + AT_rich Low_complexity Low_complexity 1 39 0 1829 168 0 0 chr20 28020784 28021088 -44132794 - AluSx SINE Alu -8 304 1 2047 207 106 40 chr20 28021404 28021949 -44131933 - MLT1E LTR MaLR -1 592 12 346 317 69 14 chr20 28022519 28022664 -44131218 + L2 LINE L2 3159 3311 -2 244 326 20 10 chr20 28024159 28024257 -44129625 + MIR SINE MIR 51 149 -113 560 308 99 56 chr20 28024614 28025027 -44128855 + L2 LINE L2 2344 2774 -540 324 282 48 0 chr20 28025270 28025373 -44128509 - MLT1L LTR MaLR -2 613 506 235 293 33 93 chr20 28025413 28025628 -44128254 - MLT1L LTR MaLR -207 408 207 231 289 13 26 chr20 28025688 28025764 -44128118 - MLT1L LTR MaLR -536 79 5 1025 251 21 29 chr20 28025894 28026173 -44127709 + L1MC4a LINE L1 7532 7808 0 330 252 63 18 chr20 28026437 28026548 -44127334 + HAL1b LINE L1 857 972 -376 852 211 23 0 chr20 28026554 28026729 -44127153 - FAM SINE Alu -1 48 1 1508 187 10 7 chr20 28026745 28027039 -44126843 - AluJb SINE Alu -12 300 6 357 271 42 99 chr20 28027047 28027471 -44126411 + HAL1b LINE L1 947 1346 -2 481 255 78 37 chr20 28028613 28028884 -44124998 - MER97c DNA MER1_type? -1 1089 808 1349 232 132 44 chr20 28028913 28029391 -44124491 - MER97b DNA MER1_type? -483 570 51 180 77 0 0 chr20 28030803 28030829 -44123053 + (TG)n Simple_repeat Simple_repeat 2 27 0 397 359 59 42 chr20 28030867 28031154 -44122728 + L3b LINE CR1 1292 1583 0 842 191 14 0 chr20 28032654 28032801 -44121081 + FAM SINE Alu 1 149 -36 186 43 0 0 chr20 28032808 28032831 -44121051 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 295 280 42 85 chr20 28032968 28033157 -44120725 - MLT1J LTR MaLR -330 181 1 183 129 0 0 chr20 28033805 28033836 -44120046 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 825 253 111 58 chr20 28033866 28034281 -44119601 - LTR16A LTR ERVL -1 449 13 559 258 139 53 chr20 28034403 28034740 -44119142 - MLT1J LTR MaLR -145 366 1 517 286 13 7 chr20 28034927 28035081 -44118801 - MER5B DNA MER1_type -12 166 12 1739 176 0 3 chr20 28035108 28035421 -44118461 + AluJo SINE Alu 1 312 0 309 68 0 0 chr20 28035465 28035509 -44118373 + (TG)n Simple_repeat Simple_repeat 2 45 0 440 244 23 68 chr20 28035509 28035685 -44118197 - MLT1K LTR MaLR -27 561 394 732 275 108 51 chr20 28036015 28036542 -44117340 - L1ME3 LINE L1 -211 5951 5455 1603 183 7 18 chr20 28036542 28036827 -44117055 - AluJo SINE Alu -30 282 1 732 275 108 51 chr20 28036827 28037283 -44116599 - L1ME3 LINE L1 -707 5455 4904 1126 218 94 101 chr20 28037349 28037785 -44116097 - MLT1E LTR MaLR 0 593 135 1491 192 21 14 chr20 28037794 28038081 -44115801 + AluJb SINE Alu 23 311 -1 24 0 0 0 chr20 28038187 28038211 -44115671 + AT_rich Low_complexity Low_complexity 1 24 0 282 268 21 21 chr20 28038289 28038386 -44115496 - MLT1E LTR MaLR -557 97 1 186 298 0 0 chr20 28038386 28038443 -44115439 + MIR SINE MIR 159 215 -47 1345 195 29 0 chr20 28038598 28038875 -44115007 + MLT2B1 LTR ERVL 1 285 -235 261 0 0 0 chr20 28041222 28041251 -44112631 + (CA)n Simple_repeat Simple_repeat 2 30 0 2109 133 0 0 chr20 28043257 28043551 -44110331 + AluSg SINE Alu 1 294 -16 253 283 9 38 chr20 28043584 28043690 -44110192 + MER103 DNA DNA 2 104 -62 411 210 38 57 chr20 28044854 28045011 -44108871 - LTR16A1 LTR ERVL 0 457 304 588 278 145 20 chr20 28045019 28045274 -44108608 - L2 LINE L2 -188 3125 2839 220 286 133 0 chr20 28045345 28045450 -44108432 + MIR3 SINE MIR 84 202 -6 1310 205 165 9 chr20 28045795 28045806 -44108076 - L1M4 LINE L1 -748 5398 5390 2209 193 44 10 chr20 28045806 28046304 -44107578 - L1MB7 LINE L1 -15 6405 5891 1310 205 165 9 chr20 28046304 28046716 -44107166 - L1M4 LINE L1 -756 5390 4909 29 0 0 0 chr20 28046730 28046759 -44107123 + AT_rich Low_complexity Low_complexity 1 29 0 620 200 70 19 chr20 28047817 28048032 -44105850 - L1MB7 LINE L1 -1676 4706 4481 * 1215 247 86 26 chr20 28048023 28048931 -44104951 - L1MB7 LINE L1 -3462 2920 1950 296 240 70 10 chr20 28048947 28049047 -44104835 - L1MB7 LINE L1 -4545 1839 1734 504 33 0 0 chr20 28099047 28099108 -44054774 - AluY SINE Alu -248 62 2 223 304 14 0 chr20 28099622 28099691 -44054191 + (TG)n Simple_repeat Simple_repeat 1 70 0 832 267 123 11 chr20 28100043 28100417 -44053465 - LTR16A1 LTR ERVL -34 423 8 624 228 6 6 chr20 28100776 28100947 -44052935 - L1M4 LINE L1 -1695 4451 4281 625 252 70 93 chr20 28101619 28102036 -44051846 - MLT1I LTR MaLR 0 409 3 353 222 22 22 chr20 28103377 28103467 -44050415 - MIR SINE MIR -67 141 52 22 0 0 0 chr20 28103522 28103544 -44050338 + AT_rich Low_complexity Low_complexity 1 22 0 2706 78 0 3 chr20 28103548 28103896 -44049986 - L1PA8 LINE L1 -12 6160 5814 720 182 0 8 chr20 28103987 28104119 -44049763 - L1PA16 LINE L1 -9 6157 6027 187 171 14 114 chr20 28104345 28104415 -44049467 + MIR SINE MIR 170 232 -30 652 261 34 0 chr20 28105335 28105542 -44048340 - Charlie5 DNA MER1_type -27 2585 2372 1951 101 64 13 chr20 28105687 28105985 -44047897 - AluSp SINE Alu 0 313 1 240 174 261 0 chr20 28106254 28106323 -44047559 + L1MB7 LINE L1 6089 6175 -9 546 188 0 0 chr20 28106324 28106489 -44047393 + GA-rich Low_complexity Low_complexity 2 166 0 309 99 39 72 chr20 28106492 28106718 -44047164 + HERV17 LTR ERV1 704 852 -7774 192 40 0 0 chr20 28107364 28107389 -44046493 + (TCTG)n Simple_repeat Simple_repeat 2 26 0 234 0 0 0 chr20 28108344 28108370 -44045512 + (TA)n Simple_repeat Simple_repeat 2 27 0 1977 101 0 60 chr20 28108370 28108686 -44045196 - AluSc SINE Alu -12 297 1 201 225 0 0 chr20 28109698 28109738 -44044144 + GA-rich Low_complexity Low_complexity 3 42 0 540 224 38 93 chr20 28111297 28111480 -44042402 - MIR SINE MIR -28 234 62 655 275 100 53 chr20 28111670 28112182 -44041700 + MLT1H1 LTR MaLR 14 549 -6 611 228 0 0 chr20 28113814 28113928 -44039954 + MER58B DNA MER1_type 227 340 -1 2420 174 26 2 chr20 28114021 28114436 -44039446 - MSTB LTR MaLR -1 425 1 276 223 0 0 chr20 28114468 28114571 -44039311 + (CA)n Simple_repeat Simple_repeat 2 104 0 527 275 161 0 chr20 28114830 28115066 -44038816 + LTR16C LTR ERVL 180 453 -38 185 264 38 19 chr20 28118115 28118168 -44035714 - MIR3 SINE MIR -43 165 112 504 307 116 58 chr20 28118937 28119439 -44034443 - L2 LINE L2 -467 2847 2317 219 125 0 0 chr20 28119793 28119833 -44034049 + (TG)n Simple_repeat Simple_repeat 1 40 0 351 161 0 0 chr20 28120573 28120629 -44033253 - MLT1H LTR MaLR -4 545 490 23 54 0 0 chr20 28121622 28121659 -44032223 + AT_rich Low_complexity Low_complexity 1 37 0 965 165 18 18 chr20 28121970 28122140 -44031742 - MLT1A1 LTR MaLR 0 365 196 651 144 0 0 chr20 28122136 28122226 -44031656 - 5S rRNA rRNA -31 90 1 * 642 224 158 46 chr20 28122177 28122418 -44031464 - MLT1A1 LTR MaLR -97 268 1 * 376 299 138 19 chr20 28123051 28123362 -44030520 - L1MC/D LINE L1 -2194 5614 5267 228 283 62 26 chr20 28123938 28124051 -44029831 - HAL1b LINE L1 -437 911 795 1361 238 101 52 chr20 28124099 28124661 -44029221 - MLT1G LTR MaLR 0 590 1 489 287 82 94 chr20 28124834 28125175 -44028707 + L2 LINE L2 2932 3268 -4 650 260 96 29 chr20 28125217 28125602 -44028280 - HAL1b LINE L1 -472 876 466 413 249 63 101 chr20 28125619 28125687 -44028195 + MIR SINE MIR 15 84 -178 1288 212 36 43 chr20 28125687 28125989 -44027893 - AluJb SINE Alu -2 300 1 413 249 63 101 chr20 28125989 28126109 -44027773 + MIR SINE MIR 84 196 -66 447 223 46 69 chr20 28126432 28126562 -44027320 - MER63 DNA MER1_type -308 754 2 12113 135 53 72 chr20 28126669 28126968 -44026914 + Tigger1 DNA MER2_type 2 305 -2113 1778 152 10 0 chr20 28126968 28127257 -44026625 - AluSx SINE Alu -20 292 1 12113 135 53 72 chr20 28127257 28129421 -44024461 + Tigger1 DNA MER2_type 305 2418 0 293 119 0 0 chr20 28129435 28129477 -44024405 - 5S rRNA rRNA -79 42 1 465 269 87 10 chr20 28129527 28129735 -44024147 - HAL1b LINE L1 -897 451 228 2154 98 0 3 chr20 28129881 28130177 -44023705 - AluY SINE Alu -16 295 1 2070 278 88 27 chr20 28130684 28131617 -44022265 + Zaphod DNA AcHobo 1 990 -3041 761 216 37 26 chr20 28131672 28131862 -44022020 - MER20 DNA MER1_type -26 193 2 762 288 117 8 chr20 28131873 28132224 -44021658 + Zaphod DNA AcHobo 3600 3988 -43 308 253 91 7 chr20 28132967 28133121 -44020761 + L1ME4a LINE L1 5747 5913 -208 1157 240 122 6 chr20 28133155 28133467 -44020415 + MER7A DNA MER2_type 1 346 0 311 341 8 24 chr20 28133472 28133598 -44020284 + L1ME4a LINE L1 5977 6100 -21 1297 253 118 28 chr20 28134618 28135164 -44018718 - L1ME2 LINE L1 -16 6148 5549 339 339 30 36 chr20 28135168 28135336 -44018546 - MIR3 SINE MIR -6 202 36 249 342 45 0 chr20 28135741 28135852 -44018030 - L2 LINE L2 -1305 2009 1894 189 257 0 0 chr20 28135855 28135890 -44017992 + L2 LINE L2 3237 3271 -42 519 279 43 0 chr20 28135993 28136133 -44017749 - L2 LINE L2 -1536 1778 1633 289 277 109 34 chr20 28136973 28137092 -44016790 + MIR SINE MIR 64 191 -71 2720 136 21 2 chr20 28137374 28137794 -44016088 + MSTA LTR MaLR 1 428 0 479 314 87 52 chr20 28138606 28138974 -44014908 - L2 LINE L2 0 3272 2151 232 269 52 90 chr20 28139311 28139445 -44014437 - L2 LINE L2 -700 2614 2486 495 332 72 11 chr20 28141317 28141594 -44012288 + L2 LINE L2 1993 2286 -1028 460 326 176 11 chr20 28141632 28142102 -44011780 + L2 LINE L2 2503 3049 -223 607 236 130 17 chr20 28142791 28142997 -44010885 + L1ME1 LINE L1 5943 6170 0 889 289 57 21 chr20 28143245 28143715 -44010167 - LTR16C LTR ERVL -2 489 3 384 309 86 45 chr20 28143945 28144165 -44009717 - MIR SINE MIR -13 249 21 406 191 152 0 chr20 28144871 28144976 -44008906 + LTR16C LTR ERVL 371 491 0 234 202 42 34 chr20 28146949 28147068 -44006814 + GA-rich Low_complexity Low_complexity 1 120 0 187 263 0 0 chr20 28147571 28147628 -44006254 - MIR SINE MIR -109 153 97 367 237 68 8 chr20 28148518 28148636 -44005246 + MIR SINE MIR 109 233 -29 445 293 0 14 chr20 28149719 28149859 -44004023 + MER117 DNA MER1_type 58 195 -2 348 344 78 10 chr20 28151145 28151337 -44002545 - MIR SINE MIR -11 251 47 229 239 0 0 chr20 28151520 28151566 -44002316 + L2 LINE L2 3227 3272 0 1528 234 165 17 chr20 28151589 28151760 -44002122 - MLT1D LTR MaLR -7 498 354 1437 122 8 239 chr20 28151760 28152284 -44001598 - MER57A LTR ERV1 0 403 1 1528 234 165 17 chr20 28152284 28152530 -44001352 - MLT1D LTR MaLR -151 354 19 227 379 11 0 chr20 28152770 28152865 -44001017 + MIR SINE MIR 123 218 -44 253 353 29 0 chr20 28155194 28155296 -43998586 + L2 LINE L2 3204 3308 -5 232 330 162 11 chr20 28155460 28155651 -43998231 + MIR SINE MIR 33 252 -10 232 271 25 57 chr20 28155682 28155804 -43998078 - LTR67 LTR ERVL -14 543 426 1295 249 148 15 chr20 28157602 28158080 -43995802 + L1MC4 LINE L1 7362 7903 -139 183 278 0 28 chr20 28158453 28158525 -43995357 - MIR3 SINE MIR -53 155 86 21 0 0 0 chr20 28159168 28159189 -43994693 + AT_rich Low_complexity Low_complexity 1 21 0 306 0 0 0 chr20 28161048 28161082 -43992800 + (TA)n Simple_repeat Simple_repeat 2 35 0 4159 56 9 34 chr20 28161189 28161746 -43992136 - L1PA8 LINE L1 -8 6164 5622 712 292 75 59 chr20 28161890 28162383 -43991499 - MLT1J LTR MaLR 0 511 11 1877 253 32 26 chr20 28162459 28162958 -43990924 + LTR45 LTR ERV1 22 523 -2 500 287 72 29 chr20 28162958 28163159 -43990723 - MLT1J LTR MaLR -192 319 110 356 247 47 20 chr20 28163552 28163702 -43990180 - MER103 DNA DNA -9 157 4 423 263 28 38 chr20 28164466 28164679 -43989203 + L1ME4a LINE L1 5846 6056 -65 2082 111 0 13 chr20 28164838 28165145 -43988737 - AluSx SINE Alu -9 303 1 422 222 0 0 chr20 28167008 28167089 -43986793 - L1MC4 LINE L1 -20 8022 7942 1026 244 109 0 chr20 28167115 28167426 -43986456 - L1MC4 LINE L1 -183 7859 7515 27 0 0 0 chr20 28169158 28169185 -43984697 + AT_rich Low_complexity Low_complexity 1 27 0 1722 204 24 31 chr20 28169185 28169601 -43984281 - L1PB4 LINE L1 0 6156 5744 323 271 62 8 chr20 28169603 28169732 -43984150 + LTR16C LTR ERVL 355 490 -1 2063 121 3 3 chr20 28170388 28170685 -43983197 - AluJb SINE Alu -15 297 1 339 218 35 11 chr20 28171775 28171862 -43982020 + MIR SINE MIR 98 186 -76 192 292 123 0 chr20 28172544 28172609 -43981273 + L2 LINE L2 3200 3272 0 473 232 177 77 chr20 28173146 28173471 -43980411 + MLT1H LTR MaLR 51 579 -16 5480 196 33 85 chr20 28174289 28174848 -43979034 + L1MC1 LINE L1 3915 4501 -1832 6939 65 6 28 chr20 28174848 28176518 -43977364 - L1PA7 LINE L1 -16 6138 4488 5480 196 33 85 chr20 28176518 28178499 -43975383 + L1MC1 LINE L1 4501 6317 -16 798 204 15 6 chr20 28178841 28179486 -43974396 + CT-rich Low_complexity Low_complexity 1 650 0 300 351 43 69 chr20 28179486 28179791 -43974091 - L2 LINE L2 -9 3263 2967 1106 237 95 58 chr20 28180069 28180479 -43973403 - LTR16A LTR ERVL -10 440 16 804 266 178 23 chr20 28181503 28181857 -43972025 + LTR16C LTR ERVL 83 491 0 417 256 116 18 chr20 28182621 28182785 -43971097 + L3b LINE CR1 1161 1340 -243 2034 107 14 0 chr20 28182849 28183139 -43970743 - AluSg1 SINE Alu -15 294 1 295 117 333 0 chr20 28183363 28183423 -43970459 - MADE1 DNA Mariner 0 80 1 197 265 60 48 chr20 28187577 28187660 -43966222 + MIR SINE MIR 16 99 -109 462 165 10 31 chr20 28187871 28187968 -43965914 - FLAM_C SINE Alu -2 141 47 1551 216 50 41 chr20 28188189 28188652 -43965230 + MLT1C LTR MaLR 1 467 0 296 308 125 6 chr20 28189069 28189243 -43964639 + MIR SINE MIR 15 205 -36 2729 240 39 31 chr20 28191158 28191933 -43961949 + L1MCb LINE L1 -135 645 -5262 1269 188 43 14 chr20 28191917 28192355 -43961527 + L1MCb LINE L1 1443 2253 -4173 * 5136 110 37 0 chr20 28192361 28193099 -43960783 + L1PA14 LINE L1 5397 6161 0 1261 254 89 41 chr20 28193092 28194142 -43959740 + L1MEc LINE L1 1660 2693 -3522 * 6817 175 41 11 chr20 28194263 28196082 -43957800 + L1MA9 LINE L1 3975 5842 -470 * 36821 101 15 20 chr20 28196055 28202027 -43951855 + L1MD2 LINE L1 433 6358 -1 641 297 50 83 chr20 28202487 28202992 -43950890 - L2 LINE L2 0 3313 2826 725 316 163 38 chr20 28203610 28204347 -43949535 + L2 LINE L2 2448 3272 0 218 189 0 0 chr20 28204391 28204428 -43949454 + CT-rich Low_complexity Low_complexity 2 38 0 963 297 105 13 chr20 28208677 28209067 -43944815 + LTR16A1 LTR ERVL 26 451 -6 362 246 55 9 chr20 28210326 28210436 -43943446 + MLT1K LTR MaLR 349 463 -125 3918 214 38 37 chr20 28210905 28211338 -43942544 + L1MCb LINE L1 1 432 -6132 192 40 0 0 chr20 28211338 28211363 -43942519 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 3918 214 38 37 chr20 28211363 28212744 -43941138 + L1MCb LINE L1 432 1930 -4634 711 183 4 55 chr20 28212737 28212964 -43940918 - L1ME2 LINE L1 -307 5857 5653 * 26 34 0 51 chr20 28213038 28213097 -43940785 + AT_rich Low_complexity Low_complexity 1 56 0 1479 202 59 24 chr20 28213139 28213339 -43940543 + L1MC2 LINE L1 5960 6178 -166 2265 92 0 20 chr20 28213339 28213642 -43940240 + AluY SINE Alu 2 298 -13 1479 202 59 24 chr20 28213642 28213778 -43940104 + L1MC2 LINE L1 6178 6308 -36 27986 42 5 2 chr20 28213827 28218056 -43935826 - L1PA4 LINE L1 0 6549 1933 244 25 75 0 chr20 28218370 28218410 -43935472 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 6740 80 10 10 chr20 28218410 28219391 -43934491 - L1PA8 LINE L1 -22 6150 5172 2734 182 16 0 chr20 28220033 28220534 -43933348 - L1MC3 LINE L1 -15 7770 7262 454 314 98 18 chr20 28220617 28220887 -43932995 - ERVL LTR ERVL -185 5300 5047 843 304 56 8 chr20 28220923 28221278 -43932604 - ERVL LTR ERVL -733 4921 4550 434 88 15 0 chr20 28221307 28221375 -43932507 + (TTTTC)n Simple_repeat Simple_repeat 2 70 0 404 254 132 79 chr20 28221902 28222182 -43931700 - MLT1H LTR MaLR -252 297 3 10129 171 8 39 chr20 28222549 28224180 -43929702 + L1M2 LINE L1 3403 4969 -1331 2150 114 0 0 chr20 28224180 28224478 -43929404 + AluSc SINE Alu 6 303 0 10129 171 8 39 chr20 28224478 28225061 -43928821 + L1M2 LINE L1 4969 5569 -731 407 250 103 60 chr20 28225687 28225871 -43928011 - L1ME2 LINE L1 -57 6107 5916 691 160 0 3 chr20 28226260 28226377 -43927505 + L1PA16 LINE L1 5996 6110 -44 510 205 53 116 chr20 28226764 28226845 -43927037 - L1MC5 LINE L1 -205 7756 7671 2457 117 24 46 chr20 28226845 28227142 -43926740 + L1PA16 LINE L1 5761 6048 -118 2743 35 0 0 chr20 28227142 28227453 -43926429 + AluY SINE Alu 1 311 0 2457 117 24 46 chr20 28227453 28227565 -43926317 + L1PA16 LINE L1 6048 6161 -5 510 205 53 116 chr20 28227565 28227786 -43926096 - L1MC5 LINE L1 -290 7671 7473 2428 50 3 0 chr20 28228178 28228475 -43925407 - AluY SINE Alu -12 299 2 211 210 222 0 chr20 28229423 28229504 -43924378 - MIR SINE MIR -6 256 158 2149 194 49 9 chr20 28229569 28230018 -43923864 + MLT1C LTR MaLR 1 467 0 206 294 104 29 chr20 28230039 28230231 -43923651 - MIR SINE MIR -19 243 32 710 299 134 36 chr20 28231286 28231764 -43922118 - MLT1H LTR MaLR 0 549 25 820 203 158 20 chr20 28232132 28232334 -43921548 + MER46A DNA MER2_type 1 230 -6 1448 178 0 4 chr20 28235438 28235663 -43918219 + MER58A DNA MER1_type 1 224 0 303 358 0 0 chr20 28235946 28236055 -43917827 + MIR SINE MIR 104 212 -50 225 264 69 23 chr20 28236107 28236194 -43917688 - MIR3 SINE MIR -24 184 94 226 375 16 0 chr20 28236253 28236381 -43917501 - MIR SINE MIR -8 254 125 850 197 59 25 chr20 28236865 28237068 -43916814 + MER20 DNA MER1_type 10 219 0 496 304 55 37 chr20 28237257 28237530 -43916352 - LTR16C LTR ERVL -2 489 212 197 257 14 43 chr20 28238531 28238601 -43915281 - L2 LINE L2 -8 3305 3238 939 268 106 27 chr20 28238664 28239071 -43914811 + LTR33A LTR ERVL 57 495 -28 227 265 30 157 chr20 28239090 28239164 -43914718 + L2 LINE L2 2825 2907 -406 2215 84 45 0 chr20 28239164 28239451 -43914431 - AluY SINE Alu -11 300 1 227 265 30 157 chr20 28239451 28239772 -43914110 + L2 LINE L2 2907 3170 -143 588 256 31 31 chr20 28240329 28240520 -43913362 + LTR16C LTR ERVL 298 488 -3 453 266 82 0 chr20 28240849 28241020 -43912862 + MER5A DNA MER1_type 7 189 0 1881 227 75 50 chr20 28241465 28242002 -43911880 - MER77 LTR ERV1 -15 590 41 334 294 102 47 chr20 28242023 28242278 -43911604 + LTR16C LTR ERVL 223 491 0 391 292 44 9 chr20 28242536 28242649 -43911233 - LTR33A LTR ERVL -341 182 66 1668 84 34 0 chr20 28245029 28245266 -43908616 - L1PA10 LINE L1 -1 6167 5923 3375 89 0 33 chr20 28245285 28245316 -43908566 - MER41A LTR ERV1 -85 469 439 1859 94 25 97 chr20 28245316 28245635 -43908247 + AluSg SINE Alu 1 296 -14 3375 89 0 33 chr20 28245635 28246088 -43907794 - MER41A LTR ERV1 -115 439 1 1106 52 22 0 chr20 28246089 28246223 -43907659 - MER41A-int LTR ERV1 -11 5935 5799 1564 87 5 0 chr20 28246223 28246431 -43907451 - L1PA10 LINE L1 -195 5936 5728 27 49 0 0 chr20 28246905 28246946 -43906936 + AT_rich Low_complexity Low_complexity 1 41 0 754 218 19 66 chr20 28247809 28248020 -43905862 + MER3 DNA MER1_type 1 201 -8 830 307 95 0 chr20 28248045 28248351 -43905531 + L2 LINE L2 633 967 -2347 736 261 103 52 chr20 28248351 28248440 -43905442 - L1MEc LINE L1 -5609 787 704 712 204 8 0 chr20 28248440 28248572 -43905310 + FLAM_A SINE Alu 1 133 0 736 261 103 52 chr20 28248572 28248850 -43905032 - L1MEc LINE L1 -5692 704 401 339 218 178 20 chr20 28249018 28249119 -43904763 - L1MEc LINE L1 -6010 386 270 225 0 0 0 chr20 28249148 28249173 -43904709 + (GA)n Simple_repeat Simple_repeat 2 26 0 376 203 0 0 chr20 28249181 28249250 -43904632 - L1MEc LINE L1 -6294 102 34 3704 274 141 19 chr20 28249262 28249545 -43904337 + L2 LINE L2 996 1243 -2070 729 0 0 0 chr20 28249545 28249626 -43904256 + (TTCTC)n Simple_repeat Simple_repeat 1 81 0 3704 274 141 19 chr20 28249626 28251356 -43902526 + L2 LINE L2 1243 3305 -8 295 278 0 14 chr20 28252567 28252639 -43901243 + (TG)n Simple_repeat Simple_repeat 1 71 0 432 258 139 57 chr20 28253515 28253868 -43900014 + MLT1J1 LTR MaLR 15 396 -50 * 1356 255 81 9 chr20 28253848 28254279 -43899603 - MLT1C LTR MaLR -5 462 1 253 143 0 82 chr20 28254288 28254337 -43899545 + MLT1J2 LTR MaLR 403 447 -3 1547 183 42 25 chr20 28255278 28255562 -43898320 - AluJo SINE Alu -23 289 1 5392 170 49 15 chr20 28255562 28257390 -43896492 - L1MC1 LINE L1 -9 6324 4596 7475 208 30 25 chr20 28257395 28257933 -43895949 - L1 LINE L1 -2451 4337 3803 1560 199 19 13 chr20 28257933 28258240 -43895642 - AluJo SINE Alu -3 309 1 7475 208 30 25 chr20 28258240 28261199 -43892683 - L1 LINE L1 -2985 3803 844 1565 211 61 12 chr20 28261758 28262235 -43891647 - L1MCa LINE L1 -4630 1977 1290 2204 108 0 40 chr20 28262235 28262559 -43891323 - AluY SINE Alu 0 311 1 946 201 91 42 chr20 28262576 28262914 -43890968 - MSTC LTR MaLR -17 348 2 6322 186 18 41 chr20 28262914 28264218 -43889664 - L1MCa LINE L1 -5133 1293 20 217 304 139 17 chr20 28264507 28264622 -43889260 - MIR SINE MIR -10 252 124 1229 196 164 116 chr20 28264864 28265186 -43888696 - MLT1F1 LTR MaLR 0 567 262 195 42 0 0 chr20 28265186 28265210 -43888672 + (GA)n Simple_repeat Simple_repeat 1 24 0 1229 196 164 116 chr20 28265210 28265249 -43888633 - MLT1F1 LTR MaLR -305 262 226 8192 141 3 0 chr20 28265249 28267404 -43886478 - L1PA10 LINE L1 -13 6155 4058 1229 196 164 116 chr20 28267404 28267584 -43886298 - MLT1F1 LTR MaLR -341 226 1 2335 248 51 11 chr20 28267753 28268385 -43885497 + L1MC4 LINE L1 7260 7916 -126 230 191 0 0 chr20 28268406 28268448 -43885434 + L1MC4 LINE L1 8000 8041 -1 479 319 22 4 chr20 28269717 28269946 -43883936 - L1M4 LINE L1 -2686 3460 3228 215 182 11 68 chr20 28270570 28270658 -43883224 + A-rich Low_complexity Low_complexity 2 84 0 258 222 0 0 chr20 28271517 28271571 -43882311 + MER103 DNA DNA 58 111 -55 28 29 0 0 chr20 28272088 28272123 -43881759 + AT_rich Low_complexity Low_complexity 1 35 0 25 0 0 0 chr20 28272535 28272560 -43881322 + AT_rich Low_complexity Low_complexity 1 25 0 307 212 106 78 chr20 28272602 28272781 -43881101 - L1ME3 LINE L1 -45 6117 5934 243 0 0 0 chr20 28272785 28272812 -43881070 + (A)n Simple_repeat Simple_repeat 1 27 0 2363 107 3 22 chr20 28272824 28273189 -43880693 - L1PA15 LINE L1 -13 6152 5795 584 264 165 24 chr20 28273195 28273528 -43880354 - L1ME3 LINE L1 -219 5943 5564 271 245 0 0 chr20 28273604 28273657 -43880225 + MER31B LTR ERV1 5 57 -409 1113 45 0 0 chr20 28273663 28273797 -43880085 - L1PA5 LINE L1 -6 6148 6015 2525 30 7 0 chr20 28273797 28274098 -43879784 + L1P LINE L1 4918 5220 -926 1846 226 92 7 chr20 28274100 28274556 -43879326 + MER67A LTR ERV1 49 543 0 467 235 80 8 chr20 28274556 28274724 -43879158 - L1ME3 LINE L1 -720 5444 5272 1747 137 21 3 chr20 28276045 28276330 -43877552 - L1PB3 LINE L1 0 6154 5865 2265 111 7 0 chr20 28276452 28276758 -43877124 + AluSg SINE Alu 1 308 -2 2210 115 0 3 chr20 28277130 28277425 -43876457 - AluSq SINE Alu -19 294 1 1121 182 79 87 chr20 28278064 28278432 -43875450 - MLT1A1 LTR MaLR 0 365 1 1953 147 0 0 chr20 28278668 28278999 -43874883 - AluSq SINE Alu 0 331 1 27 49 0 0 chr20 28279008 28279049 -43874833 + AT_rich Low_complexity Low_complexity 1 41 0 210 118 0 0 chr20 28279178 28279212 -43874670 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 231 114 0 0 chr20 28279330 28279365 -43874517 + (TG)n Simple_repeat Simple_repeat 2 36 0 790 276 54 44 chr20 28279501 28279907 -43873975 - MER20B DNA MER1_type -373 410 1 1056 269 85 45 chr20 28282933 28283405 -43870477 + LTR16C LTR ERVL 1 491 0 1554 134 24 38 chr20 28284257 28284548 -43869334 - L1MB3 LINE L1 0 6183 5897 1555 241 31 21 chr20 28284688 28285170 -43868712 + L1MC1 LINE L1 4159 4645 -1501 1642 251 63 2 chr20 28286584 28287111 -43866771 + L1MC1 LINE L1 4637 5195 -951 37229 63 7 0 chr20 28287112 28293228 -43860654 + L1PA5 LINE L1 2 6154 0 6105 158 27 3 chr20 28293229 28294348 -43859534 + L1MC1 LINE L1 5188 6333 0 1126 319 158 37 chr20 28294391 28294838 -43859044 + L2 LINE L2 1377 1768 -1545 1842 123 0 60 chr20 28294838 28295154 -43858728 + AluSx SINE Alu 1 297 -15 1126 319 158 37 chr20 28295154 28296157 -43857725 + L2 LINE L2 1768 3044 -269 333 0 0 0 chr20 28296254 28296291 -43857591 + (CA)n Simple_repeat Simple_repeat 1 37 0 343 311 11 0 chr20 28296303 28296393 -43857489 + L2 LINE L2 3223 3313 0 1825 162 33 0 chr20 28296527 28296860 -43857022 + L1MA7 LINE L1 5795 6138 -153 196 269 124 48 chr20 28298047 28298192 -43855690 - MIR SINE MIR -64 144 9 2280 232 16 33 chr20 28298663 28299240 -43854642 + MLT1F1 LTR MaLR 1 567 0 245 279 36 18 chr20 28299363 28299474 -43854408 + LTR33 LTR ERVL 405 517 -4 2164 82 0 33 chr20 28300127 28300432 -43853450 + AluY SINE Alu 1 295 -16 613 170 9 9 chr20 28302045 28302157 -43851725 - MER53 DNA DNA -77 112 1 509 312 25 10 chr20 28302160 28302359 -43851523 - LTR16A LTR ERVL -75 375 174 860 239 140 51 chr20 28302921 28303277 -43850605 - LTR16C LTR ERVL 0 491 104 230 358 62 0 chr20 28303440 28303616 -43850266 - L2 LINE L2 -339 2975 2789 307 300 11 94 chr20 28304486 28304666 -43849216 + MIR3 SINE MIR 3 167 -41 282 250 313 25 chr20 28304729 28304889 -43848993 + MIR SINE MIR 2 207 -55 345 279 50 14 chr20 28305022 28305162 -43848720 - LTR67 LTR ERVL -4 553 409 1629 140 64 0 chr20 28305591 28305856 -43848026 + AluSx SINE Alu 19 300 -12 347 314 73 73 chr20 28306543 28306791 -43847091 - MIR SINE MIR -3 259 12 189 107 0 0 chr20 28306807 28306835 -43847047 + (CAGA)n Simple_repeat Simple_repeat 3 30 0 2233 67 0 0 chr20 28306983 28307305 -43846577 - AluY SINE Alu 0 311 11 1938 130 103 30 chr20 28307588 28307927 -43845955 - THE1B LTR MaLR 0 364 1 11837 88 5 45 chr20 28307927 28309573 -43844309 - THE1B-int LTR MaLR 0 1580 1 1905 148 111 15 chr20 28309573 28309905 -43843977 - THE1B LTR MaLR 0 364 1 433 289 126 32 chr20 28310196 28310386 -43843496 + MIR SINE MIR 53 260 -2 185 227 0 91 chr20 28310610 28310676 -43843206 + L2 LINE L2 3169 3228 -85 228 86 0 0 chr20 28310817 28310852 -43843030 + (CA)n Simple_repeat Simple_repeat 2 36 0 26 50 0 0 chr20 28310918 28310958 -43842924 + AT_rich Low_complexity Low_complexity 1 40 0 462 279 64 8 chr20 28311007 28311203 -43842679 - MIR SINE MIR 0 262 56 1120 192 0 0 chr20 28311346 28311560 -43842322 + AluJb SINE Alu 87 300 -12 401 228 25 0 chr20 28311893 28311972 -43841910 - AluJo SINE Alu -1 301 221 523 171 63 18 chr20 28311972 28312083 -43841799 - AluJo SINE Alu -124 188 73 210 352 117 34 chr20 28312515 28312813 -43841069 - L2 LINE L2 -1264 2050 1728 1146 227 69 66 chr20 28312945 28313140 -43840742 - L1MC5 LINE L1 -66 7895 7702 1908 108 0 0 chr20 28313140 28313399 -43840483 + AluSc SINE Alu 38 296 -13 1146 227 69 66 chr20 28313399 28313794 -43840088 - L1MC5 LINE L1 -259 7702 7303 839 207 6 6 chr20 28314184 28314363 -43839519 + AluJo SINE Alu 118 296 -16 267 31 0 0 chr20 28316623 28316655 -43837227 + (TG)n Simple_repeat Simple_repeat 1 32 0 197 280 129 11 chr20 28317647 28317740 -43836142 + MIR SINE MIR 28 131 -77 183 162 0 0 chr20 28319837 28319874 -43834008 + (CA)n Simple_repeat Simple_repeat 2 38 0 500 0 0 16 chr20 28321049 28321110 -43832772 + (GAAA)n Simple_repeat Simple_repeat 3 62 0 200 114 0 29 chr20 28325913 28325948 -43827934 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 30 27 0 0 chr20 28329876 28329913 -43823969 + AT_rich Low_complexity Low_complexity 1 37 0 349 20 20 20 chr20 28330656 28330707 -43823175 + (TG)n Simple_repeat Simple_repeat 1 51 0 229 215 0 62 chr20 28332536 28332601 -43821281 + MIR SINE MIR 79 139 -123 25 31 0 0 chr20 28337646 28337678 -43816204 + GC_rich Low_complexity Low_complexity 1 32 0 225 170 0 21 chr20 28339860 28339907 -43813975 + L1ME2 LINE L1 6118 6163 -1 188 139 56 0 chr20 28340218 28340254 -43813628 + L2 LINE L2 1971 2008 -1306 21 0 0 0 chr20 28340591 28340612 -43813270 + AT_rich Low_complexity Low_complexity 1 21 0 180 77 0 0 chr20 28341171 28341197 -43812685 + (TGG)n Simple_repeat Simple_repeat 1 26 0 251 266 0 0 chr20 28343499 28343563 -43810319 + CT-rich Low_complexity Low_complexity 6 69 0 569 58 0 11 chr20 28343764 28343851 -43810031 + (GGA)n Simple_repeat Simple_repeat 1 86 0 195 42 0 0 chr20 28345659 28345683 -43808199 + (CA)n Simple_repeat Simple_repeat 2 25 0 2258 112 3 0 chr20 28347288 28347592 -43806290 + AluSq SINE Alu 1 305 -8 240 143 0 0 chr20 28349229 28349271 -43804611 - L2 LINE L2 -4 3309 3268 389 220 213 35 chr20 28349936 28350077 -43803805 - MER5A DNA MER1_type -8 181 16 22 35 0 0 chr20 28350497 28350526 -43803356 + AT_rich Low_complexity Low_complexity 1 29 0 274 242 0 16 chr20 28352303 28352365 -43801517 + (TG)n Simple_repeat Simple_repeat 1 61 0 243 170 0 0 chr20 28353728 28353775 -43800107 + (TGGA)n Simple_repeat Simple_repeat 1 47 0 636 267 121 0 chr20 28353871 28354103 -43799779 - MER112 DNA MER1_type 0 260 1 364 277 15 22 chr20 28354147 28354284 -43799598 + MIR SINE MIR 117 252 -10 413 250 9 18 chr20 28355557 28355669 -43798213 - LTR16A1 LTR ERVL 0 457 347 823 296 73 14 chr20 28356643 28357001 -43796881 + LTR16A LTR ERVL 64 442 -8 1665 257 44 2 chr20 28357225 28357633 -43796249 - LTR16C LTR ERVL 0 491 67 2074 84 0 4 chr20 28357932 28358194 -43795688 + AluY SINE Alu 1 261 -50 1860 153 7 27 chr20 28358415 28358571 -43795311 - AluSx SINE Alu -17 295 137 369 0 0 0 chr20 28358571 28358612 -43795270 + (TTTA)n Simple_repeat Simple_repeat 3 43 0 2184 112 0 20 chr20 28358613 28358908 -43794974 - AluSp SINE Alu -24 289 1 1860 153 7 27 chr20 28358908 28359050 -43794832 - AluSx SINE Alu -174 138 1 34 0 0 0 chr20 28359055 28359089 -43794793 + AT_rich Low_complexity Low_complexity 1 34 0 464 260 49 0 chr20 28360897 28361020 -43792862 + MIR SINE MIR 6 134 -128 216 0 0 0 chr20 28361571 28361595 -43792287 + (T)n Simple_repeat Simple_repeat 1 24 0 224 359 29 10 chr20 28361659 28361762 -43792120 + MIR SINE MIR 20 124 -84 412 202 9 73 chr20 28362198 28362307 -43791575 - MER5A DNA MER1_type -83 106 5 1912 136 122 20 chr20 28363739 28364093 -43789789 + MLT1B LTR MaLR 1 390 0 1496 214 0 16 chr20 28367867 28368176 -43785706 - AluJo SINE Alu -8 304 1 733 294 174 9 chr20 28368267 28368686 -43785196 + L1MC4a LINE L1 5416 5903 -1905 25 51 0 0 chr20 28368854 28368893 -43784989 + AT_rich Low_complexity Low_complexity 1 39 0 1952 163 0 0 chr20 28368901 28369202 -43784680 - AluSx SINE Alu -11 301 1 1970 210 106 46 chr20 28369518 28370066 -43783816 - MLT1E LTR MaLR -1 592 12 288 317 69 14 chr20 28370636 28370781 -43783101 + L2 LINE L2 3159 3311 -2 213 324 7 3 chr20 28372276 28372374 -43781508 + MIR SINE MIR 51 147 -61 460 335 103 25 chr20 28372772 28373130 -43780752 + L2 LINE L2 2373 2758 -556 301 291 48 0 chr20 28373387 28373490 -43780392 - MLT1L LTR MaLR -2 613 506 229 289 13 26 chr20 28373805 28373881 -43780001 - MLT1L LTR MaLR -536 79 5 1043 247 21 29 chr20 28374011 28374290 -43779592 + L1MC4a LINE L1 7532 7808 0 230 216 81 36 chr20 28374555 28374666 -43779216 + HAL1b LINE L1 857 972 -376 906 211 23 0 chr20 28374672 28374847 -43779035 - FAM SINE Alu -1 48 1 1582 200 10 7 chr20 28374863 28375163 -43778719 - AluJb SINE Alu -11 301 1 427 274 40 97 chr20 28375166 28375590 -43778292 + HAL1b LINE L1 947 1346 -2 530 256 78 33 chr20 28376732 28377002 -43776880 - MER97c DNA MER1_type? -1 1089 808 1370 230 132 44 chr20 28377031 28377509 -43776373 - MER97a DNA MER1_type? -324 570 51 180 77 0 0 chr20 28378921 28378947 -43774935 + (TG)n Simple_repeat Simple_repeat 2 27 0 328 335 45 13 chr20 28378985 28379140 -43774742 + L3b LINE CR1 1292 1451 -132 885 197 14 0 chr20 28380773 28380920 -43772962 + FAM SINE Alu 1 149 -36 186 43 0 0 chr20 28380927 28380950 -43772932 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 301 280 42 85 chr20 28381087 28381276 -43772606 - MLT1J LTR MaLR -330 181 1 183 129 0 0 chr20 28381924 28381955 -43771927 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 790 253 111 58 chr20 28381985 28382400 -43771482 - LTR16A LTR ERVL -1 449 13 533 255 139 53 chr20 28382522 28382859 -43771023 - MLT1J LTR MaLR -145 366 1 459 283 14 0 chr20 28383055 28383200 -43770682 - MER5B DNA MER1_type -20 158 12 1873 173 0 3 chr20 28383227 28383540 -43770342 + AluJo SINE Alu 1 312 0 309 68 0 0 chr20 28383584 28383628 -43770254 + (TG)n Simple_repeat Simple_repeat 2 45 0 438 244 23 68 chr20 28383628 28383804 -43770078 - MLT1K LTR MaLR -27 561 394 751 276 108 51 chr20 28384134 28384661 -43769221 - L1ME3 LINE L1 -211 5951 5455 1614 183 7 18 chr20 28384661 28384946 -43768936 - AluJo SINE Alu -30 282 1 751 276 108 51 chr20 28384946 28385402 -43768480 - L1ME3 LINE L1 -707 5455 4904 1154 220 94 101 chr20 28385468 28385904 -43767978 - MLT1E LTR MaLR 0 593 135 1511 188 21 14 chr20 28385913 28386200 -43767682 + AluJb SINE Alu 23 311 -1 24 0 0 0 chr20 28386306 28386330 -43767552 + AT_rich Low_complexity Low_complexity 1 24 0 282 268 21 21 chr20 28386408 28386505 -43767377 - MLT1E LTR MaLR -557 97 1 1375 195 29 0 chr20 28386717 28386994 -43766888 + MLT2B1 LTR ERVL 1 285 -235 261 0 0 0 chr20 28389341 28389370 -43764512 + (CA)n Simple_repeat Simple_repeat 2 30 0 2137 133 0 0 chr20 28391376 28391670 -43762212 + AluSg SINE Alu 1 294 -16 268 283 9 38 chr20 28391703 28391809 -43762073 + MER103 DNA DNA 2 104 -62 433 210 38 57 chr20 28392973 28393130 -43760752 - LTR16A1 LTR ERVL 0 457 304 617 274 145 20 chr20 28393138 28393393 -43760489 - L2 LINE L2 -188 3125 2839 218 286 133 0 chr20 28393464 28393569 -43760313 + MIR3 SINE MIR 84 202 -6 1387 205 165 9 chr20 28393914 28393925 -43759957 - L1M4 LINE L1 -748 5398 5390 2408 193 44 10 chr20 28393925 28394423 -43759459 - L1MB7 LINE L1 -15 6667 6153 1387 205 165 9 chr20 28394423 28394835 -43759047 - L1M4 LINE L1 -756 5390 4909 29 0 0 0 chr20 28394849 28394878 -43759004 + AT_rich Low_complexity Low_complexity 1 29 0 660 200 70 19 chr20 28395936 28396151 -43757731 - L1MB7 LINE L1 -1676 4968 4743 * 2559 243 78 68 chr20 28396142 28397327 -43756555 - L1MB7 LINE L1 -3462 3182 1851 2247 122 3 0 chr20 28397327 28397638 -43756244 - AluSx SINE Alu 0 312 1 2559 243 78 68 chr20 28397638 28398328 -43755554 - L1MB7 LINE L1 -4793 1851 1169 2819 251 61 27 chr20 28398338 28399144 -43754738 - L1MB7 LINE L1 -5705 837 5 21 57 0 0 chr20 28400048 28400083 -43753799 + AT_rich Low_complexity Low_complexity 1 35 0 1068 295 65 25 chr20 28400731 28401299 -43752583 + L2 LINE L2 2729 3313 0 423 282 176 54 chr20 28401619 28402006 -43751876 + L2 LINE L2 2880 3313 0 2142 130 81 29 chr20 28402644 28402990 -43750892 - THE1B LTR MaLR 0 364 1 12351 102 4 6 chr20 28402990 28404573 -43749309 - THE1B-int LTR MaLR 0 1580 1 2174 114 79 26 chr20 28404575 28404917 -43748965 - THE1B LTR MaLR -2 362 3 801 311 42 9 chr20 28405623 28406051 -43747831 - L1M4 LINE L1 -2539 3607 3166 651 237 0 22 chr20 28406389 28406524 -43747358 - FLAM_C SINE Alu -1 132 1 243 61 0 0 chr20 28407147 28407180 -43746702 + (CA)n Simple_repeat Simple_repeat 2 34 0 2943 124 26 0 chr20 28407242 28407596 -43746286 - L1PB1 LINE L1 -4 6147 5779 492 18 0 0 chr20 28407596 28407653 -43746229 + (TA)n Simple_repeat Simple_repeat 1 57 0 2943 124 26 0 chr20 28407653 28407725 -43746157 - L1PB1 LINE L1 -372 5779 5710 2152 224 4 16 chr20 28407726 28408235 -43745647 + L1P LINE L1 4852 5354 -792 745 291 149 7 chr20 28408325 28408755 -43745127 - LTR16C LTR ERVL 0 491 1 5759 143 6 14 chr20 28408998 28410620 -43743262 - L1PA15 LINE L1 -1 6164 4542 860 276 105 84 chr20 28410711 28411284 -43742598 - MLT1G LTR MaLR 0 590 11 188 250 106 48 chr20 28411425 28411529 -43742353 + L2 LINE L2 3163 3272 0 181 250 19 39 chr20 28412095 28412147 -43741735 + L2 LINE L2 344 394 -2920 291 267 0 0 chr20 28413324 28413459 -43740423 + (CA)n Simple_repeat Simple_repeat 1 135 0 480 235 0 0 chr20 28413484 28413646 -43740236 + (CA)n Simple_repeat Simple_repeat 1 162 0 532 331 0 0 chr20 28413664 28413842 -43740040 + (CA)n Simple_repeat Simple_repeat 1 178 0 291 210 34 17 chr20 28413853 28413972 -43739910 + (CATATA)n Simple_repeat Simple_repeat 2 122 0 379 343 6 0 chr20 28413972 28414144 -43739738 + (CA)n Simple_repeat Simple_repeat 2 174 0 252 367 0 0 chr20 28414179 28414348 -43739534 + (CA)n Simple_repeat Simple_repeat 2 170 0 24 53 0 0 chr20 28414976 28415014 -43738868 + AT_rich Low_complexity Low_complexity 1 38 0 2790 149 24 20 chr20 28415279 28415783 -43738099 - L1MB3 LINE L1 -2 6181 5676 198 146 49 0 chr20 28415900 28415941 -43737941 - MER5B DNA MER1_type -134 44 2 1736 99 11 27 chr20 28416040 28416303 -43737579 - L1MA5 LINE L1 -336 5964 5706 284 235 26 0 chr20 28417079 28417163 -43736719 - MIR SINE MIR -68 140 60 189 248 60 68 chr20 28417163 28417193 -43736689 + L2 LINE L2 1390 1502 -1812 410 204 50 52 chr20 28418105 28418289 -43735593 - HsTC2 DNA Tc2 -3 1895 4 2219 116 3 0 chr20 28419742 28420053 -43733829 + AluSx SINE Alu 1 312 0 574 169 0 0 chr20 28420063 28420146 -43733736 + AluS SINE Alu 2 84 -228 2220 126 0 0 chr20 28420294 28420596 -43733286 - AluSq SINE Alu -11 302 1 22 35 0 0 chr20 28421060 28421089 -43732793 + AT_rich Low_complexity Low_complexity 1 29 0 316 192 50 10 chr20 28421262 28421361 -43732521 - L1MA4A LINE L1 -1 6302 6200 207 0 0 0 chr20 28421361 28421384 -43732498 + (TC)n Simple_repeat Simple_repeat 2 24 0 * 225 0 0 0 chr20 28421383 28421408 -43732474 + (TA)n Simple_repeat Simple_repeat 1 25 0 2065 131 7 7 chr20 28421408 28421705 -43732177 - AluSx SINE Alu -15 297 1 895 234 21 4 chr20 28421705 28421944 -43731938 - L1MA4A LINE L1 -182 6121 5879 814 230 65 30 chr20 28423904 28424104 -43729778 - MSTD LTR MaLR -2 394 188 841 214 0 0 chr20 28424104 28424258 -43729624 - FRAM SINE Alu -21 155 2 683 237 54 21 chr20 28424259 28424445 -43729437 - MSTD LTR MaLR -204 192 1 6008 228 70 67 chr20 28424445 28425988 -43727894 - MSTD-int LTR MaLR 0 1735 184 2169 76 0 0 chr20 28425988 28426250 -43727632 + AluY SINE Alu 1 262 -49 6008 228 70 67 chr20 28426250 28426433 -43727449 - MSTD-int LTR MaLR -1551 184 3 1211 209 78 33 chr20 28426437 28426783 -43727099 - MSTD LTR MaLR -2 394 1 778 227 115 54 chr20 28427228 28427523 -43726359 + MLT1J1 LTR MaLR 64 376 -70 14297 113 23 30 chr20 28428222 28431072 -43722810 + L1MD2 LINE L1 3544 6358 -1 641 297 50 83 chr20 28431532 28432037 -43721845 - L2 LINE L2 0 3313 2826 725 316 163 38 chr20 28432655 28433392 -43720490 + L2 LINE L2 2448 3272 0 218 189 0 0 chr20 28433436 28433473 -43720409 + CT-rich Low_complexity Low_complexity 2 38 0 963 297 105 13 chr20 28437722 28438112 -43715770 + LTR16A1 LTR ERVL 26 451 -6 362 246 55 9 chr20 28439371 28439481 -43714401 + MLT1K LTR MaLR 349 463 -125 3918 214 38 37 chr20 28439950 28440383 -43713499 + L1MCb LINE L1 1 432 -6132 192 40 0 0 chr20 28440383 28440408 -43713474 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 3918 214 38 37 chr20 28440408 28441789 -43712093 + L1MCb LINE L1 432 1930 -4634 711 177 0 33 chr20 28441831 28442000 -43711882 - L1MC/D LINE L1 -562 5782 5663 26 34 0 51 chr20 28442083 28442142 -43711740 + AT_rich Low_complexity Low_complexity 1 56 0 1479 202 59 24 chr20 28442184 28442384 -43711498 + L1MC2 LINE L1 5960 6178 -166 2265 92 0 20 chr20 28442384 28442687 -43711195 + AluY SINE Alu 2 298 -13 1479 202 59 24 chr20 28442687 28442823 -43711059 + L1MC2 LINE L1 6178 6308 -36 27907 43 5 2 chr20 28442872 28447100 -43706782 - L1PA4 LINE L1 0 6549 1933 244 25 75 0 chr20 28447414 28447454 -43706428 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 6740 80 10 10 chr20 28447454 28448435 -43705447 - L1PA8 LINE L1 -22 6150 5172 2734 182 16 0 chr20 28449077 28449578 -43704304 - L1MC3 LINE L1 -15 7770 7262 454 314 98 18 chr20 28449661 28449931 -43703951 - ERVL LTR ERVL -185 5300 5047 903 277 60 18 chr20 28449986 28450322 -43703560 - ERVL LTR ERVL -826 4938 4589 2061 151 0 22 chr20 28450351 28450706 -43703176 - AluSx SINE Alu 0 348 1 453 288 22 33 chr20 28450720 28450904 -43702978 - ERVL LTR ERVL -1223 4541 4360 691 253 152 81 chr20 28450911 28451393 -43702489 - LTR33 LTR ERVL 0 521 6 1389 260 56 46 chr20 28452962 28453462 -43700420 - MLT1D LTR MaLR 0 505 1 994 270 118 6 chr20 28453976 28454332 -43699550 - LTR16C LTR ERVL 0 491 96 1589 125 155 10 chr20 28455706 28456009 -43697873 - L1PA13 LINE L1 -2 6161 5815 532 159 29 14 chr20 28456011 28456213 -43697669 + CT-rich Low_complexity Low_complexity 1 204 0 2166 127 0 0 chr20 28456213 28456513 -43697369 - AluSx SINE Alu -11 301 2 13327 130 20 150 chr20 28456515 28459740 -43694142 - L1PA13 LINE L1 -340 5828 3264 338 0 24 0 chr20 28459740 28459782 -43694100 + (TTG)n Simple_repeat Simple_repeat 2 44 0 13327 130 20 150 chr20 28459782 28460615 -43693267 - L1PA13 LINE L1 -2904 3264 2324 400 276 103 22 chr20 28461492 28461677 -43692205 + L1ME LINE L1 10 209 -5910 280 346 84 5 chr20 28461939 28462141 -43691741 + L1ME LINE L1 4941 5158 -971 285 29 0 0 chr20 28462206 28462240 -43691642 + (GA)n Simple_repeat Simple_repeat 2 35 0 491 281 95 32 chr20 28462250 28462712 -43691170 + L1ME LINE L1 5262 5756 -397 228 246 0 0 chr20 28463764 28463833 -43690049 + (CA)n Simple_repeat Simple_repeat 2 70 0 1635 154 7 40 chr20 28464897 28465195 -43688687 + AluJo SINE Alu 2 289 -23 274 356 171 19 chr20 28465272 28465800 -43688082 - L3 LINE CR1 -154 1423 816 386 305 8 15 chr20 28466227 28466358 -43687524 + LTR16C LTR ERVL 362 491 0 2345 168 72 2 chr20 28466797 28467197 -43686685 + MSTA LTR MaLR 1 428 0 210 118 0 0 chr20 28467653 28467687 -43686195 + (TTTTC)n Simple_repeat Simple_repeat 2 35 0 2386 87 0 0 chr20 28469577 28469877 -43684005 - AluY SINE Alu -11 300 1 1037 214 78 0 chr20 28469956 28470199 -43683683 + L1MA8 LINE L1 6027 6288 -3 925 236 134 99 chr20 28470642 28471185 -43682697 - MLT1G LTR MaLR -33 557 1 2027 138 7 7 chr20 28471742 28472046 -43681836 + AluSx SINE Alu 9 312 0 1067 288 91 11 chr20 28473133 28473508 -43680374 - LTR16C LTR ERVL -14 477 73 8070 236 12 4 chr20 28473698 28475563 -43678319 + L1PA15 LINE L1 2761 4640 -1506 5315 135 17 19 chr20 28475556 28476417 -43677465 + L1PA15 LINE L1 5304 6163 -2 * 695 169 8 0 chr20 28476488 28476606 -43677276 - L1MA10 LINE L1 -2 6332 6214 2255 101 0 7 chr20 28477419 28477717 -43676165 - AluSg SINE Alu -9 301 6 684 239 33 11 chr20 28479102 28479282 -43674600 + MER5A DNA MER1_type 1 184 -5 1047 308 40 0 chr20 28479407 28479728 -43674154 + LTR16C LTR ERVL 146 479 -12 690 209 7 7 chr20 28480229 28480377 -43673505 - LTR32 LTR ERVL 0 471 324 1770 158 20 69 chr20 28480391 28480502 -43673380 - LTR32 LTR ERVL -126 345 230 2231 110 0 7 chr20 28480502 28480802 -43673080 - AluSx SINE Alu -14 298 1 1770 158 20 69 chr20 28480802 28481038 -43672844 - LTR32 LTR ERVL -241 230 15 1075 297 71 2 chr20 28481944 28482365 -43671517 + LTR16C LTR ERVL 42 491 0 874 318 135 38 chr20 28482647 28483612 -43670270 - L2 LINE L2 -518 2796 1739 229 302 139 62 chr20 28484974 28485103 -43668779 - L2 LINE L2 0 3272 3134 21 82 0 0 chr20 28485287 28485336 -43668546 + AT_rich Low_complexity Low_complexity 1 49 0 23 0 0 0 chr20 28485380 28485403 -43668479 + AT_rich Low_complexity Low_complexity 1 23 0 12075 185 8 22 chr20 28485623 28486779 -43667103 - L1PB1 LINE L1 -4 6863 5693 2017 119 13 29 chr20 28486779 28487090 -43666792 - AluSx SINE Alu -2 310 5 12075 185 8 22 chr20 28487090 28489555 -43664327 - L1PB1 LINE L1 -1174 5693 3295 245 216 0 0 chr20 28489544 28489595 -43664287 - L1P LINE L1 -2057 4089 4039 * 4094 223 93 3 chr20 28489612 28490646 -43663236 - L1PB1 LINE L1 -5706 1157 31 3150 198 51 11 chr20 28490658 28491458 -43662424 - L1MD3 LINE L1 -4 7991 6951 221 0 0 33 chr20 28491629 28491659 -43662223 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 227 332 85 68 chr20 28492122 28492712 -43661170 + L2 LINE L2 2351 2950 -364 586 240 160 0 chr20 28492761 28492911 -43660971 + MER5A DNA MER1_type 10 183 -6 323 266 32 21 chr20 28493116 28493210 -43660672 - L2 LINE L2 -5 3267 3173 180 387 52 23 chr20 28493476 28493649 -43660233 - L3 LINE CR1 -11 1566 1389 1906 151 20 7 chr20 28493812 28494117 -43659765 - AluSx SINE Alu -3 309 1 271 313 36 71 chr20 28494216 28494328 -43659554 - LTR16C LTR ERVL -277 214 107 245 29 29 0 chr20 28496067 28496101 -43657781 + (CA)n Simple_repeat Simple_repeat 1 35 0 508 246 55 55 chr20 28496644 28496827 -43657055 - MER5A DNA MER1_type 0 189 7 183 156 0 0 chr20 28498582 28498614 -43655268 + CT-rich Low_complexity Low_complexity 2 33 0 219 360 27 9 chr20 28499905 28500016 -43653866 + L2 LINE L2 2563 2675 -639 913 199 54 50 chr20 28500317 28500578 -43653304 - L1MD3 LINE L1 0 7995 7734 2413 146 23 50 chr20 28500581 28501019 -43652863 + Tigger2a DNA MER2_type 1 426 -8 415 267 52 7 chr20 28501024 28501159 -43652723 - L1MD3 LINE L1 -261 7734 7594 21 36 0 0 chr20 28501408 28501436 -43652446 + AT_rich Low_complexity Low_complexity 1 28 0 230 71 0 48 chr20 28502761 28502803 -43651079 + (CATA)n Simple_repeat Simple_repeat 2 41 0 2051 63 0 4 chr20 28503662 28503916 -43649966 + AluY SINE Alu 44 296 -15 440 329 74 18 chr20 28503982 28504319 -43649563 - L1M4 LINE L1 -2106 4040 3685 1295 203 78 73 chr20 28505149 28505528 -43648354 - MLT2B1 LTR ERVL 0 397 1 289 264 165 8 chr20 28505528 28505649 -43648233 - L1M4 LINE L1 -3331 2815 2676 190 316 88 0 chr20 28506029 28506086 -43647796 + MIR SINE MIR 6 67 -195 190 347 0 13 chr20 28506130 28506205 -43647677 + MIR SINE MIR 189 262 0 24 32 0 0 chr20 28506206 28506237 -43647645 + AT_rich Low_complexity Low_complexity 1 31 0 5740 246 31 40 chr20 28506955 28507156 -43646726 - L1 LINE L1 -2055 3915 3714 2279 85 0 0 chr20 28507156 28507463 -43646419 - AluSg SINE Alu 0 307 1 5740 246 31 40 chr20 28507463 28509197 -43644685 - L1 LINE L1 -2256 3714 1996 3742 242 51 38 chr20 28509193 28510597 -43643285 - L1 LINE L1 -4189 1781 365 * 387 41 0 0 chr20 28510656 28510705 -43643177 + (TG)n Simple_repeat Simple_repeat 2 50 0 438 323 67 70 chr20 28510875 28511262 -43642620 - L1 LINE L1 -5505 386 1 1267 303 26 16 chr20 28512084 28512467 -43641415 - LTR16C LTR ERVL -29 462 76 258 345 57 48 chr20 28513922 28514131 -43639751 - L2 LINE L2 -3 3269 3059 1167 252 47 47 chr20 28514327 28514851 -43639031 - MLT1E LTR MaLR 0 593 19 2380 80 0 40 chr20 28515682 28516006 -43637876 - AluY SINE Alu 0 311 1 466 268 8 16 chr20 28516019 28516146 -43637736 - L2 LINE L2 -1 3312 3187 2283 233 117 20 chr20 28516183 28516887 -43636995 + L1MC4 LINE L1 7271 8042 0 252 384 46 9 chr20 28518570 28518789 -43635093 - MIR SINE MIR -28 234 8 1445 233 88 9 chr20 28519038 28519471 -43634411 - Charlie4a DNA MER1_type -8 500 34 1441 236 53 17 chr20 28520381 28520742 -43633140 - MLT1A2 LTR MaLR 0 374 1 2475 183 31 86 chr20 28520803 28521383 -43632499 + MLT2B3 LTR ERVL 1 548 -6 24 0 0 0 chr20 28521481 28521505 -43632377 + AT_rich Low_complexity Low_complexity 1 24 0 257 280 10 40 chr20 28521508 28521608 -43632274 - HAL1b LINE L1 -54 1294 1198 201 303 90 8 chr20 28522731 28522853 -43631029 - MIR3 SINE MIR -75 133 2 441 276 52 15 chr20 28524274 28524408 -43629474 + MER3 DNA MER1_type 1 139 -70 186 71 0 0 chr20 28524500 28524528 -43629354 + (TATTG)n Simple_repeat Simple_repeat 2 29 0 330 139 42 42 chr20 28524547 28524619 -43629263 + MER3 DNA MER1_type 136 207 -2 * 334 149 15 45 chr20 28524576 28524643 -43629239 - MER3 DNA MER1_type -117 92 28 257 329 81 31 chr20 28524821 28524982 -43628900 - MIR3 SINE MIR -10 198 30 1105 191 13 40 chr20 28525298 28525523 -43628359 + MER20 DNA MER1_type 1 219 0 1190 188 41 103 chr20 28525965 28526402 -43627480 - LTR37A LTR ERV1 0 426 17 552 351 57 25 chr20 28526476 28526949 -43626933 - L2 LINE L2 -1622 1692 1205 1715 221 82 33 chr20 28526953 28527114 -43626768 + L1MD1 LINE L1 4775 4927 -1219 291 54 0 0 chr20 28527114 28527151 -43626731 + (CAAA)n Simple_repeat Simple_repeat 4 40 0 1715 221 82 33 chr20 28527151 28527564 -43626318 + L1MD1 LINE L1 4927 5377 -769 1455 194 46 22 chr20 28527570 28527894 -43625988 + L1MD1 LINE L1 5909 6240 -2 691 275 211 51 chr20 28527895 28528644 -43625238 - L2 LINE L2 -2098 1216 348 780 204 7 0 chr20 28528645 28528787 -43625095 + MER5A DNA MER1_type 3 145 -44 2048 119 7 7 chr20 28529052 28529355 -43624527 + AluSq SINE Alu 1 303 -10 1056 208 68 24 chr20 28529763 28530013 -43623869 + MIR SINE MIR 2 262 0 280 250 75 0 chr20 28532787 28532867 -43621015 - MER5A DNA MER1_type 0 189 104 2885 90 0 3 chr20 28532996 28533352 -43620530 + THE1A LTR MaLR 1 355 0 1214 77 0 0 chr20 28533352 28533507 -43620375 + THE1A-int LTR MaLR 1 155 -1425 1681 197 37 40 chr20 28534266 28534641 -43619241 + MLT1A2 LTR MaLR 1 374 0 1653 190 3 7 chr20 28535353 28535643 -43618239 - AluJo SINE Alu -23 289 1 1091 149 139 0 chr20 28536630 28536831 -43617051 + LTR47A LTR ERVL 16 244 -208 527 158 0 0 chr20 28536867 28536949 -43616933 + MER4B-int LTR ERV1 2645 2726 -3220 332 203 14 0 chr20 28536980 28537049 -43616833 + MER34C LTR ERV1 155 224 -361 2229 128 91 13 chr20 28537061 28537444 -43616438 - MER4D LTR ERV1 -308 595 183 668 133 0 20 chr20 28537444 28537542 -43616340 + FLAM_A SINE Alu 35 130 -12 1173 137 16 5 chr20 28537542 28537732 -43616150 - MER4B LTR ERV1 -418 192 1 5534 157 55 23 chr20 28537737 28538796 -43615086 + MER4B-int LTR ERV1 2915 4007 -2751 378 216 0 68 chr20 28538810 28538898 -43614984 + MER4B-int LTR ERV1 5977 6058 -700 1699 190 78 59 chr20 28538913 28539335 -43614547 + LTR47A LTR ERVL 1 430 -22 488 250 158 0 chr20 28539878 28540042 -43613840 - L1M4 LINE L1 -2118 4028 3839 14979 202 32 7 chr20 28540084 28546599 -43607283 + L1PB1 LINE L1 6 6859 -8 1590 178 70 7 chr20 28546601 28546871 -43607011 - AluSx SINE Alu -23 289 3 682 253 51 54 chr20 28546871 28547105 -43606777 - L1M4 LINE L1 -2299 3847 3613 3192 132 78 5 chr20 28547105 28547667 -43606215 + LTR26 LTR ERV1 1 603 0 682 253 51 54 chr20 28547667 28547748 -43606134 - L1M4 LINE L1 -2533 3613 3533 1014 233 32 13 chr20 28549263 28549663 -43604219 + Charlie4a DNA MER1_type 49 493 -15 324 143 143 14 chr20 28551148 28551218 -43602664 + MLT1G1 LTR MaLR 103 181 -414 1110 241 82 11 chr20 28551218 28551583 -43602299 + L1M4 LINE L1 3626 4016 -2130 * 1955 221 85 55 chr20 28551581 28551826 -43602056 - L1MDa LINE L1 -5924 616 380 3353 182 16 3 chr20 28551826 28552442 -43601440 - L1PB4 LINE L1 -1 6155 5532 1955 221 85 55 chr20 28552442 28552774 -43601108 - L1MDa LINE L1 -6160 380 22 313 296 98 80 chr20 28552772 28553291 -43600591 - HAL1 LINE L1 -850 1657 1116 * 1240 219 131 27 chr20 28553291 28553437 -43600445 + MLT1A1 LTR MaLR 1 130 -235 2175 104 0 7 chr20 28553437 28553752 -43600130 + AluSc SINE Alu 1 313 0 1240 219 131 27 chr20 28553752 28553931 -43599951 + MLT1A1 LTR MaLR 130 362 -3 313 296 98 80 chr20 28553931 28554257 -43599625 - HAL1 LINE L1 -1391 1116 797 914 253 67 14 chr20 28554260 28554716 -43599166 + LTR33 LTR ERVL 1 513 -8 2123 173 10 30 chr20 28554807 28555205 -43598677 - MLT1B LTR MaLR 0 390 1 2194 124 50 19 chr20 28555799 28556163 -43597719 - THE1C LTR MaLR 0 375 1 1118 184 74 220 chr20 28556648 28556922 -43596960 - L1MC3 LINE L1 -2 7993 7681 972 182 0 0 chr20 28556922 28557076 -43596806 - FRAM SINE Alu -22 154 1 1118 184 74 220 chr20 28557076 28557434 -43596448 - L1MC3 LINE L1 -314 7681 7323 2616 53 0 0 chr20 28559151 28559452 -43594430 - AluY SINE Alu -10 301 1 228 279 8 33 chr20 28559625 28559686 -43594196 + (TG)n Simple_repeat Simple_repeat 1 59 -60 980 147 32 37 chr20 28559686 28559876 -43594006 + MER53 DNA DNA 1 189 0 228 279 8 33 chr20 28559876 28559936 -43593946 + (TG)n Simple_repeat Simple_repeat 59 119 0 1150 192 213 0 chr20 28560332 28560572 -43593310 + AluJo SINE Alu 1 291 -21 44628 44 4 0 chr20 28560990 28567118 -43586764 - L1PA4 LINE L1 -2 6153 2 232 269 167 0 chr20 28568188 28568266 -43585616 + MLT1L LTR MaLR 190 280 -335 353 314 124 31 chr20 28569127 28569515 -43584367 - MLT1L LTR MaLR -2 613 190 411 271 110 0 chr20 28570845 28571000 -43582882 + MER5A DNA MER1_type 18 189 0 306 0 0 0 chr20 28571078 28571112 -43582770 + (TG)n Simple_repeat Simple_repeat 2 35 0 185 314 0 47 chr20 28571396 28571482 -43582400 - L2 LINE L2 -1 3271 3190 1486 244 25 8 chr20 28573528 28573885 -43579997 - MLT1A1 LTR MaLR 0 365 3 447 314 27 50 chr20 28574674 28574894 -43578988 + LTR16C LTR ERVL 127 341 -150 309 241 46 19 chr20 28574936 28575044 -43578838 + LTR16C LTR ERVL 350 460 -31 1934 221 106 8 chr20 28575565 28576077 -43577805 - REP3 LTR ERV 0 562 1 1469 220 51 61 chr20 28576204 28576599 -43577283 - MLT2B1 LTR ERVL 0 520 130 207 0 0 0 chr20 28576637 28576660 -43577222 + (CAAT)n Simple_repeat Simple_repeat 1 23 0 631 304 103 22 chr20 28578469 28578801 -43575081 + L1M4 LINE L1 4760 5139 -1007 1067 167 12 69 chr20 28578801 28579047 -43574835 - MER46A DNA MER2_type 0 236 5 631 304 103 22 chr20 28579047 28579162 -43574720 + L1M4 LINE L1 5139 5243 -903 344 233 67 112 chr20 28579217 28579440 -43574442 - MIR SINE MIR 0 262 50 331 322 0 0 chr20 28579486 28579601 -43574281 + (TCCA)n Simple_repeat Simple_repeat 4 118 0 1962 167 11 59 chr20 28579601 28579883 -43573999 + LTR53 LTR ERVL 1 262 -257 1852 139 26 20 chr20 28579883 28580052 -43573830 - AluJb SINE Alu -8 304 131 228 35 0 0 chr20 28580052 28580081 -43573801 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 1852 139 26 20 chr20 28580081 28580213 -43573669 - AluJb SINE Alu -181 131 1 1962 167 11 59 chr20 28580213 28580301 -43573581 + LTR53 LTR ERVL 262 353 -166 1598 183 3 10 chr20 28580496 28580786 -43573096 + AluJb SINE Alu 1 288 -24 203 194 45 30 chr20 28581463 28581530 -43572352 + MER5B DNA MER1_type 106 173 -5 263 223 21 64 chr20 28582429 28582523 -43571359 + L1MC4 LINE L1 6614 6703 -1339 234 222 0 0 chr20 28582523 28582577 -43571305 + (TA)n Simple_repeat Simple_repeat 2 55 0 308 276 23 0 chr20 28582582 28582669 -43571213 + L1MC4 LINE L1 6615 6703 -1339 229 263 0 53 chr20 28582679 28582774 -43571108 + L1MC4 LINE L1 6614 6703 -1339 1841 163 0 0 chr20 28584123 28584411 -43569471 + AluSx SINE Alu 24 311 -1 383 275 45 110 chr20 28585484 28585684 -43568198 + MER102b DNA MER1_type 155 341 0 888 150 0 0 chr20 28587233 28587360 -43566522 + AluSq/x SINE Alu 1 127 -185 2120 110 41 0 chr20 28587398 28587688 -43566194 + AluSq SINE Alu 1 302 -11 241 326 52 22 chr20 28587690 28587825 -43566057 - L2 LINE L2 -351 2962 2824 2393 113 0 0 chr20 28587922 28588231 -43565651 - AluSq SINE Alu -4 309 1 2694 205 2 4 chr20 28588583 28589070 -43564812 - MER66B LTR ERV1 0 486 1 207 306 94 0 chr20 28589600 28589685 -43564197 - MIR SINE MIR -168 94 2 543 303 73 14 chr20 28639966 28640322 -43513560 + L1ME4a LINE L1 5490 5866 -255 187 324 0 0 chr20 28641951 28642019 -43511863 - MIR SINE MIR -24 238 171 1243 193 4 4 chr20 28642246 28642511 -43511371 + L1M4 LINE L1 3978 4242 -1904 261 98 0 0 chr20 28642517 28642558 -43511324 + (CA)n Simple_repeat Simple_repeat 1 41 0 1669 213 22 36 chr20 28642684 28643186 -43510696 + L1M4 LINE L1 4272 4766 -1380 * 5077 156 26 7 chr20 28643182 28643705 -43510177 + L1PA16 LINE L1 4956 5468 -698 1953 141 3 16 chr20 28643705 28644009 -43509873 + AluSq SINE Alu 3 302 -11 5077 156 26 7 chr20 28644009 28644202 -43509680 + L1PA16 LINE L1 5468 5656 -510 285 29 0 0 chr20 28644202 28644236 -43509646 + (CA)n Simple_repeat Simple_repeat 2 35 0 5077 156 26 7 chr20 28644236 28644704 -43509178 + L1PA16 LINE L1 5656 6164 -2 2257 217 18 7 chr20 28644699 28645317 -43508565 + L1M4 LINE L1 4745 5369 -777 * 650 264 85 46 chr20 28645322 28645629 -43508253 - L1MEc LINE L1 -5826 570 252 759 209 71 5 chr20 28645738 28645876 -43508006 - L1MEc LINE L1 -6153 243 87 228 35 0 0 chr20 28645876 28645905 -43507977 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 759 209 71 5 chr20 28645905 28645962 -43507920 - L1MEc LINE L1 -6309 87 35 288 279 70 47 chr20 28646605 28646734 -43507148 - MIR3 SINE MIR -36 172 41 236 150 0 0 chr20 28647374 28647414 -43506468 + L1M4 LINE L1 2784 2823 -3323 272 79 80 0 chr20 28647682 28647735 -43506147 - L1MC2 LINE L1 0 6333 6275 434 308 84 28 chr20 28648794 28649008 -43504874 + MIR SINE MIR 14 239 -23 402 147 157 172 chr20 28649593 28649624 -43504258 - L2 LINE L2 -2 3311 3281 2045 186 49 14 chr20 28649624 28650069 -43503813 + MER65C LTR ERV1 1 461 0 402 147 157 172 chr20 28650069 28650235 -43503647 - L2 LINE L2 -32 3281 3117 1138 203 65 76 chr20 28651206 28651679 -43502203 + LTR37B LTR ERV1 1 468 0 2061 189 76 57 chr20 28651722 28652342 -43501540 + MER92B LTR ERV1 4 635 -1 359 310 158 0 chr20 28652511 28652669 -43501213 + MER5A DNA MER1_type 7 189 0 260 314 57 16 chr20 28653384 28653508 -43500374 + MIR SINE MIR 22 150 -58 516 287 44 6 chr20 28653518 28653699 -43500183 - MER5A DNA MER1_type -1 188 1 199 259 24 59 chr20 28653767 28653852 -43500030 + MER5B DNA MER1_type 97 178 0 * 214 261 31 15 chr20 28653852 28653905 -43499977 + MIR3 SINE MIR 154 207 -1 488 303 27 5 chr20 28654028 28654213 -43499669 + MER5A DNA MER1_type 1 189 0 222 289 206 0 chr20 28654658 28654755 -43499127 + MER5B DNA MER1_type 55 171 -7 228 254 34 17 chr20 28654796 28654855 -43499027 + MIR SINE MIR 78 137 -71 183 387 97 0 chr20 28654873 28654966 -43498916 + L2 LINE L2 3206 3307 -6 264 314 25 8 chr20 28654977 28655095 -43498787 + MIR SINE MIR 143 262 0 341 325 26 32 chr20 28656007 28656161 -43497721 + MIR SINE MIR 20 172 -90 1721 211 20 9 chr20 28656170 28656511 -43497371 + MLT1A1 LTR MaLR 10 354 -11 4023 245 107 31 chr20 28656522 28657788 -43496094 + MLT1A1-int LTR MaLR 5 1366 -5 1822 194 19 8 chr20 28657801 28658162 -43495720 + MLT1A1 LTR MaLR 1 365 0 224 294 52 94 chr20 28658389 28658719 -43495163 + L2 LINE L2 2560 2875 -439 210 113 38 19 chr20 28660447 28660500 -43493382 + (TA)n Simple_repeat Simple_repeat 2 55 0 690 204 105 12 chr20 28660505 28660677 -43493205 - MER33 DNA MER1_type -136 188 1 398 173 51 64 chr20 28660755 28660911 -43492971 + L1M4 LINE L1 3690 3843 -2303 365 244 45 58 chr20 28660912 28661068 -43492814 + L1ME4a LINE L1 5935 6088 -33 219 130 87 0 chr20 28661097 28661143 -43492739 + A-rich Low_complexity Low_complexity 2 51 0 241 303 53 20 chr20 28661498 28661650 -43492232 + L1 LINE L1 3692 3848 -2298 479 230 12 91 chr20 28661716 28661881 -43492001 + MLT1A1 LTR MaLR 2 153 -352 917 224 25 25 chr20 28661883 28662128 -43491754 + MLT1D LTR MaLR 261 505 0 782 173 6 22 chr20 28663505 28663663 -43490219 + MER2 DNA MER2_type 1 154 -162 355 204 191 57 chr20 28663821 28663978 -43489904 + MER5A DNA MER1_type 9 186 -3 293 290 153 16 chr20 28664224 28664348 -43489534 + MIR SINE MIR 72 212 -50 347 257 0 64 chr20 28664378 28664395 -43489487 + L1MC4 LINE L1 6602 6619 -1423 2409 105 30 8 chr20 28664395 28664757 -43489125 - L1PB1 LINE L1 0 6867 6498 347 257 0 64 chr20 28664757 28664848 -43489034 + L1MC4 LINE L1 6619 6703 -1339 14705 158 36 10 chr20 28664849 28670259 -43483623 - L1PB1 LINE L1 -360 6507 965 866 221 128 46 chr20 28670663 28671029 -43482853 - MSTD LTR MaLR 0 396 1 1557 149 166 3 chr20 28671546 28671853 -43482029 + MLT1B LTR MaLR 2 358 -32 1768 162 33 30 chr20 28671853 28672187 -43481695 + MER2 DNA MER2_type 1 335 -10 313 125 77 106 chr20 28673381 28673485 -43480397 + MIR SINE MIR 107 207 -55 260 313 125 18 chr20 28675086 28675198 -43478684 + MIR SINE MIR 103 226 -36 2001 129 26 7 chr20 28675235 28675538 -43478344 + MLT2A2 LTR ERVL 1 309 -144 2000 171 28 6 chr20 28675625 28675982 -43477900 + MLT1A1 LTR MaLR 1 365 0 355 263 179 45 chr20 28676081 28676305 -43477577 + Charlie7 DNA MER1_type 1 254 -2358 1756 229 123 48 chr20 28676450 28677335 -43476547 + Charlie7 DNA MER1_type 1618 2569 -43 232 336 8 42 chr20 28679366 28679485 -43474397 + LTR37B LTR ERV1 8 122 -346 1154 202 214 59 chr20 28679490 28679972 -43473910 + MLT1F1 LTR MaLR 1 650 -4 236 178 0 0 chr20 28679980 28680025 -43473857 + LTR37B LTR ERV1 154 198 -270 345 238 119 0 chr20 28680160 28680286 -43473596 + LTR37B LTR ERV1 328 468 0 1879 193 100 32 chr20 28681285 28681345 -43472537 - MLT1D LTR MaLR -8 497 443 2185 91 0 23 chr20 28681345 28681653 -43472229 + AluSq SINE Alu 1 301 -12 1879 193 100 32 chr20 28681653 28682033 -43471849 - MLT1D LTR MaLR -62 443 27 1324 242 60 11 chr20 28682146 28682493 -43471389 - MLT1H LTR MaLR -173 376 13 781 230 56 56 chr20 28683231 28683587 -43470295 - L1MC4 LINE L1 0 8042 7687 16732 125 33 3 chr20 28684658 28687306 -43466576 - L1P LINE L1 -1103 5043 2316 1614 164 8 0 chr20 28687306 28687568 -43466314 - MER50 LTR ERV1 -470 264 1 1978 134 7 0 chr20 28687583 28687882 -43466000 - AluSx SINE Alu -11 301 1 423 288 106 61 chr20 28687905 28688283 -43465599 + L1ME2 LINE L1 5470 5864 -300 * 759 164 93 0 chr20 28688278 28688438 -43465444 + L1MB3 LINE L1 5959 6143 -36 1346 176 10 67 chr20 28688544 28688856 -43465026 - AluJb SINE Alu -18 294 1 1340 224 94 0 chr20 28689718 28690026 -43463856 - MER58B DNA MER1_type -4 337 1 286 308 94 0 chr20 28690304 28690421 -43463461 - MIR SINE MIR -125 137 10 4269 6 2 0 chr20 28690457 28690928 -43462954 - L1PA2 LINE L1 -176 5979 5508 1513 6 0 0 chr20 28690928 28691094 -43462788 + L1PA2 LINE L1 5980 6146 -9 2517 154 14 49 chr20 28691094 28691581 -43462301 + MER101 LTR ERV1 5 474 0 672 176 0 0 chr20 28692805 28693100 -43460782 + (TG)n Simple_repeat Simple_repeat 1 295 0 425 256 23 23 chr20 28693100 28693272 -43460610 + LTR16C LTR ERVL 272 443 -48 218 268 0 0 chr20 28693837 28693893 -43459989 - MIR SINE MIR -114 148 93 441 301 39 39 chr20 28695509 28695715 -43458167 - L1ME4a LINE L1 -11 6110 5905 532 288 76 25 chr20 28695862 28696162 -43457720 - L1M3 LINE L1 -463 5717 5397 22 0 0 0 chr20 28696342 28696364 -43457518 + AT_rich Low_complexity Low_complexity 1 22 0 763 131 12 88 chr20 28696417 28696577 -43457305 - MER65A LTR ERV1 0 445 298 299 311 24 53 chr20 28697565 28697639 -43456243 - L1ME4a LINE L1 -387 5734 5659 1957 144 3 3 chr20 28697639 28697951 -43455931 - AluSx SINE Alu 0 312 1 299 311 24 53 chr20 28697951 28698120 -43455762 - L1ME4a LINE L1 -462 5659 5493 2455 67 3 0 chr20 28698167 28698465 -43455417 - AluY SINE Alu -12 299 1 264 222 83 65 chr20 28699112 28699220 -43454662 + L2 LINE L2 3197 3306 -7 1658 179 3 13 chr20 28699776 28700077 -43453805 + AluJb SINE Alu 14 311 -1 223 348 11 0 chr20 28700338 28700430 -43453452 + L3 LINE CR1 696 788 -789 276 301 41 0 chr20 28700438 28700511 -43453371 - L3 LINE CR1 -88 1489 1414 1145 176 65 29 chr20 28700578 28700856 -43453026 - L1MA9 LINE L1 -22 6290 6003 182 289 184 0 chr20 28700913 28700989 -43452893 - MER5B DNA MER1_type -15 163 74 1211 223 144 3 chr20 28700996 28701372 -43452510 + MER63B DNA MER1_type 1 429 -7 1020 141 0 0 chr20 28701883 28702060 -43451822 + (GGGA)n Simple_repeat Simple_repeat 4 180 0 298 269 96 58 chr20 28702163 28702319 -43451563 - MIR SINE MIR -45 217 56 183 289 107 27 chr20 28702371 28702520 -43451362 - L2 LINE L2 -95 3218 3058 296 274 26 26 chr20 28702540 28702653 -43451229 + MLT1F1 LTR MaLR 35 147 -420 348 152 0 0 chr20 28702829 28702895 -43450987 + (TG)n Simple_repeat Simple_repeat 1 66 0 1215 213 69 33 chr20 28703628 28703990 -43449892 - MLT1C LTR MaLR 0 467 93 249 273 93 70 chr20 28704954 28705126 -43448756 - MIR SINE MIR -69 193 18 360 240 257 0 chr20 28706079 28706258 -43447624 + HAL1 LINE L1 1312 1536 -971 828 131 0 148 chr20 28706283 28706486 -43447396 + AluSg/x SINE Alu 132 308 0 1665 266 82 11 chr20 28706488 28706540 -43447342 + HAL1 LINE L1 1548 1595 -912 1930 182 45 8 chr20 28706540 28706892 -43446990 - MLT1A1 LTR MaLR 0 365 1 1665 266 82 11 chr20 28706892 28707462 -43446420 + HAL1 LINE L1 1595 2214 -293 270 194 0 0 chr20 28707476 28707538 -43446344 + (TG)n Simple_repeat Simple_repeat 1 62 0 383 278 26 64 chr20 28708085 28708351 -43445531 + HAL1 LINE L1 2241 2496 -11 23 33 0 0 chr20 28708666 28708696 -43445186 + AT_rich Low_complexity Low_complexity 1 30 0 246 271 0 0 chr20 28708699 28708758 -43445124 - MIR SINE MIR 0 262 204 207 0 0 0 chr20 28708758 28708781 -43445101 + (T)n Simple_repeat Simple_repeat 1 23 0 8046 8 0 0 chr20 28709426 28710775 -43443107 - L1PA2 LINE L1 0 6155 4806 206 329 24 0 chr20 28710797 28710879 -43443003 - MIR SINE MIR -77 185 102 1652 192 24 55 chr20 28711185 28711414 -43442468 - MLT1B LTR MaLR -21 369 155 1944 107 0 0 chr20 28711414 28711666 -43442216 - AluSx SINE Alu 0 312 61 1652 192 24 55 chr20 28711666 28711817 -43442065 - MLT1B LTR MaLR -235 155 1 1205 171 10 0 chr20 28712742 28712947 -43440935 - MER7A DNA MER2_type -140 206 2 5188 147 32 6 chr20 28712962 28713893 -43439989 + L1MC2 LINE L1 5254 6208 -136 240 241 98 18 chr20 28713895 28714007 -43439875 + MER34B LTR ERV1 1 121 -444 420 297 10 63 chr20 28714093 28714237 -43439645 + MER34B LTR ERV1 279 400 -165 2546 65 0 0 chr20 28714237 28714543 -43439339 + AluY SINE Alu 1 306 -5 420 297 10 63 chr20 28714543 28714701 -43439181 + MER34B LTR ERV1 400 565 0 356 187 37 47 chr20 28714723 28714830 -43439052 + L1MC2 LINE L1 6239 6344 0 183 129 0 0 chr20 28714874 28714905 -43438977 + (GGA)n Simple_repeat Simple_repeat 3 33 0 942 235 16 12 chr20 28714958 28715209 -43438673 + L1ME2 LINE L1 5912 6163 -1 1512 279 90 26 chr20 28716643 28717252 -43436630 - L1ME1 LINE L1 -5 6161 5514 357 24 0 0 chr20 28717480 28717522 -43436360 + (TG)n Simple_repeat Simple_repeat 2 43 0 308 203 0 0 chr20 28717755 28717819 -43436063 + MIR SINE MIR 102 165 -97 397 281 83 55 chr20 28718257 28718474 -43435408 + LTR16C LTR ERVL 77 299 -192 520 277 20 80 chr20 28718792 28719041 -43434841 - L2 LINE L2 -2 3311 3078 574 206 176 61 chr20 28719190 28719355 -43434527 + MER5A DNA MER1_type 1 184 -5 2328 69 0 17 chr20 28719521 28719809 -43434073 + AluSg SINE Alu 27 309 -1 331 327 39 19 chr20 28719843 28719999 -43433883 + HAL1 LINE L1 1494 1652 -855 304 191 35 78 chr20 28720494 28720609 -43433273 + L1M4c LINE L1 2367 2476 -3908 181 136 23 23 chr20 28721386 28721430 -43432452 + CT-rich Low_complexity Low_complexity 1 44 0 498 119 40 10 chr20 28721474 28721575 -43432307 + CT-rich Low_complexity Low_complexity 1 104 0 306 179 19 9 chr20 28722395 28722501 -43431381 + (TG)n Simple_repeat Simple_repeat 2 108 0 306 0 0 0 chr20 28726456 28726490 -43427392 + (TG)n Simple_repeat Simple_repeat 1 34 0 204 40 0 0 chr20 28726489 28726514 -43427368 + (GA)n Simple_repeat Simple_repeat 1 25 0 * 210 37 0 0 chr20 28730068 28730095 -43423787 + (CAG)n Simple_repeat Simple_repeat 1 27 0 261 253 100 1 chr20 28731157 28731397 -43422485 - LTR16C LTR ERVL -9 482 190 3548 184 38 0 chr20 28731439 28732145 -43421737 + MER54A LTR ERVL 169 901 0 235 318 151 62 chr20 28732468 28732871 -43421011 - L2 LINE L2 0 3272 2834 182 250 111 28 chr20 28733888 28733960 -43419922 + MIR3 SINE MIR 114 191 -17 24 53 0 0 chr20 28734873 28734911 -43418971 + AT_rich Low_complexity Low_complexity 1 38 0 1353 241 64 5 chr20 28734957 28735334 -43418548 + MER97a DNA MER1_type? 486 884 -10 1374 176 104 31 chr20 28735424 28735713 -43418169 + AluJb SINE Alu 1 310 -2 361 269 35 60 chr20 28735715 28735916 -43417966 + MIR SINE MIR 33 228 -34 231 279 58 76 chr20 28735995 28736167 -43417715 + MIR SINE MIR 65 233 -29 463 249 71 0 chr20 28737212 28737367 -43416515 + MIR SINE MIR 56 228 -34 422 276 52 57 chr20 28739394 28739604 -43414278 + Charlie8 DNA MER1_type 3 211 -2206 1516 92 55 5 chr20 28739766 28739984 -43413898 - MER30 DNA MER1_type 0 230 2 381 315 56 0 chr20 28740393 28740555 -43413327 + MLT1L LTR MaLR 435 605 -10 192 321 107 27 chr20 28742427 28742539 -43411343 + L2 LINE L2 2600 2720 -594 2172 110 24 3 chr20 28742614 28742905 -43410977 - AluSx SINE Alu -15 297 1 2449 98 0 0 chr20 28742959 28743266 -43410616 - AluSc SINE Alu -1 308 2 245 373 95 8 chr20 28743531 28743644 -43410238 + L2 LINE L2 3122 3245 -27 283 364 18 9 chr20 28743644 28743754 -43410128 + MER5B DNA MER1_type 1 111 -67 264 59 0 0 chr20 28743755 28743789 -43410093 + (CA)n Simple_repeat Simple_repeat 1 34 0 217 341 37 0 chr20 28744247 28744329 -43409553 + L2 LINE L2 3149 3233 -39 2333 217 34 14 chr20 28745092 28745655 -43408227 + L1MD1 LINE L1 5669 6242 0 1026 236 14 0 chr20 28746075 28746295 -43407587 - MER58A DNA MER1_type 0 224 2 2435 93 3 3 chr20 28746937 28747273 -43406609 + AluSp SINE Alu 1 336 0 307 256 12 0 chr20 28747672 28747754 -43406128 - L1ME3A LINE L1 -60 6110 6028 418 234 156 18 chr20 28747833 28748000 -43405882 - L1ME3A LINE L1 -251 5913 5724 186 227 68 0 chr20 28748360 28748404 -43405478 - L2 LINE L2 -77 3195 3149 312 319 111 15 chr20 28749425 28749564 -43404318 - MIR SINE MIR -76 186 35 1057 246 109 43 chr20 28749859 28750254 -43403628 + MER63B DNA MER1_type 14 434 -2 387 331 26 13 chr20 28752228 28752379 -43401503 - MIR3 SINE MIR -9 199 47 203 103 26 0 chr20 28752379 28752418 -43401464 + (TG)n Simple_repeat Simple_repeat 1 40 0 313 373 83 18 chr20 28752476 28752752 -43401130 + L1ME4a LINE L1 5642 5935 -186 232 282 42 0 chr20 28754087 28754158 -43399724 + MER5A DNA MER1_type 1 74 -115 2212 139 0 0 chr20 28754159 28754469 -43399413 + AluSx SINE Alu 1 310 -2 483 63 0 0 chr20 28754473 28754536 -43399346 + (GGAA)n Simple_repeat Simple_repeat 2 64 0 1411 228 94 21 chr20 28754548 28754983 -43398899 - MLT1C LTR MaLR 0 467 1 283 276 86 0 chr20 28755232 28755348 -43398534 - LTR16C LTR ERVL 0 491 366 1274 232 40 16 chr20 28756084 28756454 -43397428 - MLT1B LTR MaLR -4 386 8 189 305 93 17 chr20 28756462 28756580 -43397302 - MIR SINE MIR -57 205 79 282 367 20 20 chr20 28756940 28757090 -43396792 + L2 LINE L2 2865 3014 -299 209 333 29 0 chr20 28757167 28757236 -43396646 + L2 LINE L2 3201 3271 -42 226 323 94 31 chr20 28758043 28758170 -43395712 - MIR3 SINE MIR -65 143 9 2080 143 10 0 chr20 28758920 28759228 -43394654 - AluSx SINE Alu -1 311 1 334 299 90 30 chr20 28759964 28760098 -43393784 - MIR SINE MIR -65 143 19 316 333 10 0 chr20 28760411 28760513 -43393369 + MIR SINE MIR 6 108 -154 267 289 62 41 chr20 28760609 28760803 -43393079 - LTR16C LTR ERVL -39 452 255 328 271 24 0 chr20 28761023 28761108 -43392774 + MIR3 SINE MIR 83 169 -39 602 289 55 18 chr20 28762856 28763162 -43390720 - MLT1G1 LTR MaLR -283 272 2 305 300 0 0 chr20 28763350 28763430 -43390452 - MIR SINE MIR -106 156 77 207 278 67 33 chr20 28764919 28765009 -43388873 + L2 LINE L2 3178 3270 -2 202 307 120 0 chr20 28766294 28766369 -43387513 + MER5C DNA MER1_type 111 194 -130 228 291 13 0 chr20 28767414 28767493 -43386389 - MIR SINE MIR -64 144 65 728 231 94 0 chr20 28768250 28768462 -43385420 + L1ME1 LINE L1 5799 6030 -136 1704 162 62 14 chr20 28768532 28768981 -43384901 + LTR64 LTR ERVK 1 535 -23 286 293 12 0 chr20 28769213 28769295 -43384587 - MER58A DNA MER1_type -19 88 6 502 243 0 59 chr20 28770388 28770524 -43383358 - MER3 DNA MER1_type -81 128 1 306 274 21 0 chr20 28770631 28770726 -43383156 - MER20 DNA MER1_type 0 219 123 464 256 163 6 chr20 28772330 28772502 -43381380 - MIR SINE MIR -55 207 9 1749 189 3 3 chr20 28775275 28775587 -43378295 + AluJo SINE Alu 1 312 0 431 305 13 20 chr20 28776527 28776678 -43377204 + MIR SINE MIR 111 260 -2 4421 199 23 34 chr20 28777872 28778011 -43375871 + L1MB2 LINE L1 4335 4474 -1697 2348 50 43 3 chr20 28778011 28778293 -43375589 + AluY SINE Alu 1 293 -18 4421 199 23 34 chr20 28778293 28780006 -43373876 + L1MB2 LINE L1 4474 6167 -4 294 339 27 0 chr20 28780463 28780575 -43373307 - MIR SINE MIR -112 150 36 285 251 132 65 chr20 28780575 28780780 -43373102 - MLT1B LTR MaLR 0 555 331 1675 214 12 3 chr20 28781827 28782173 -43371709 + MER65C LTR ERV1 1 349 -112 371 260 24 47 chr20 28782140 28782267 -43371615 + LTR51 LTR ERV1 548 671 0 * 511 289 115 46 chr20 28783762 28783847 -43370035 - L1MC/D LINE L1 -803 5343 5265 1813 14 0 0 chr20 28783847 28784096 -43369786 + L1PA2 LINE L1 5934 6182 0 511 289 115 46 chr20 28784096 28784438 -43369444 - L1MC/D LINE L1 -881 5265 5006 602 274 149 4 chr20 28786003 28786258 -43367624 - L2 LINE L2 -3 3310 3019 322 258 79 0 chr20 28786964 28787053 -43366829 + HAL1b LINE L1 1249 1344 -4 265 303 0 0 chr20 28787658 28787724 -43366158 + GA-rich Low_complexity Low_complexity 3 68 0 476 236 6 0 chr20 28787749 28787906 -43365976 + (TG)n Simple_repeat Simple_repeat 1 158 0 188 309 48 24 chr20 28789981 28790065 -43363817 + L2 LINE L2 3185 3270 -2 210 356 11 11 chr20 28790834 28790921 -43362961 - MER5A DNA MER1_type -38 151 65 265 309 90 56 chr20 28791455 28791743 -43362139 + L1ME4a LINE L1 5813 6110 -11 342 297 36 14 chr20 28792410 28792548 -43361334 - L3 LINE CR1 -75 1502 1362 404 255 10 0 chr20 28792579 28792677 -43361205 - MER5A DNA MER1_type -87 102 4 330 26 0 0 chr20 28792778 28792817 -43361065 + (CA)n Simple_repeat Simple_repeat 2 40 0 237 275 50 0 chr20 28792820 28792900 -43360982 - L3 LINE CR1 -241 1336 1253 428 274 164 42 chr20 28795613 28795923 -43357959 - MLT1H1 LTR MaLR -8 547 200 1845 189 44 6 chr20 28797818 28798184 -43355698 - MLT1B LTR MaLR -10 380 1 608 215 16 0 chr20 28798584 28798705 -43355177 + FRAM SINE Alu 1 122 -54 1274 33 0 33 chr20 28798710 28798728 -43355154 + (GAAA)n Simple_repeat Simple_repeat 1 195 0 1274 33 0 33 chr20 28798728 28798912 -43354970 + (GAAA)n Simple_repeat Simple_repeat 2 179 0 1031 272 24 20 chr20 28799150 28799448 -43354434 + LTR10D LTR ERV1 157 455 -58 791 131 17 26 chr20 28799455 28799686 -43354196 + GA-rich Low_complexity Low_complexity 1 229 0 1100 86 23 0 chr20 28799689 28799866 -43354016 + (GAAA)n Simple_repeat Simple_repeat 1 181 0 2294 65 3 7 chr20 28801454 28801761 -43352121 - AluY SINE Alu -5 306 1 298 330 36 18 chr20 28802105 28802217 -43351665 + L2 LINE L2 3197 3310 -3 * 332 244 84 38 chr20 28802201 28802332 -43351550 + MIR SINE MIR 72 208 -54 183 217 0 83 chr20 28803928 28803988 -43349894 - L2 LINE L2 -1278 2036 1982 689 147 37 0 chr20 28804776 28804885 -43348997 - 5S rRNA rRNA -1 120 8 209 260 104 52 chr20 28805728 28805805 -43348077 + L2 LINE L2 3192 3272 0 250 312 75 58 chr20 28806243 28806416 -43347466 + L2 LINE L2 3117 3292 -21 454 319 55 12 chr20 28807784 28807947 -43345935 - MER5B DNA MER1_type -8 170 1 1903 107 4 15 chr20 28808813 28809085 -43344797 - AluSq SINE Alu -44 269 1 268 276 130 52 chr20 28810473 28810803 -43343079 - LTR16C LTR ERVL -135 356 1 2006 117 3 0 chr20 28810956 28811271 -43342611 + AluSx SINE Alu 1 316 0 804 257 92 9 chr20 28811443 28811764 -43342118 - L1ME1 LINE L1 -206 5958 5589 5449 49 0 3 chr20 28811940 28812599 -43341283 - L1PA5 LINE L1 -6 6148 5492 341 283 101 7 chr20 28813281 28813419 -43340463 - L1ME LINE L1 -334 5787 5637 320 366 33 13 chr20 28813443 28813596 -43340286 - MIR SINE MIR -63 199 44 1045 139 31 10 chr20 28814930 28815124 -43338758 + HSMAR2 DNA Mariner 5 202 -1100 9184 178 15 5 chr20 28815124 28816134 -43337748 - L1PB1 LINE L1 -8 6143 5144 1502 110 0 22 chr20 28816134 28816382 -43337500 - AluY SINE Alu 0 311 80 9184 178 15 5 chr20 28816382 28818292 -43335590 - L1PB1 LINE L1 -1007 5144 3191 553 224 27 14 chr20 28818420 28818567 -43335315 - MER51-int LTR ERV1 -2432 2583 2435 852 165 34 0 chr20 28818569 28818745 -43335137 - MER51-int LTR ERV1 -3693 4123 3942 * 3434 160 43 5 chr20 28818737 28819324 -43334558 - MER51-int LTR ERV1 -1936 6983 6375 1152 136 6 11 chr20 28819375 28819551 -43334331 - LTR9 LTR ERV1 0 612 438 6565 144 27 2 chr20 28819557 28820617 -43333265 + HSMAR2 DNA Mariner 214 1300 -2 1686 157 58 68 chr20 28820709 28821103 -43332779 - MLT1B LTR MaLR 0 390 1 1408 221 32 2 chr20 28821103 28821505 -43332377 + L1M4 LINE L1 4169 4582 -1564 728 297 51 20 chr20 28822364 28822657 -43331225 + LTR16A LTR ERVL 89 390 -60 192 356 93 8 chr20 28823287 28823405 -43330477 + MIR SINE MIR 4 131 -131 232 289 57 88 chr20 28823748 28823907 -43329975 + L2 LINE L2 2897 3050 -222 8535 63 8 0 chr20 28825188 28827062 -43326820 - L1PA6 LINE L1 0 6154 4273 18975 124 11 13 chr20 28827062 28829963 -43323919 - L1PA6 LINE L1 -3242 2904 11 243 0 0 0 chr20 28830059 28830086 -43323796 + (TTTTG)n Simple_repeat Simple_repeat 5 31 0 217 298 210 0 chr20 28830186 28830310 -43323572 - MIR SINE MIR -93 169 20 1319 248 2 60 chr20 28830903 28831302 -43322580 - MLT1B LTR MaLR -7 383 8 228 204 41 92 chr20 28831479 28831577 -43322305 - LTR16C LTR ERVL -13 478 386 353 235 5 43 chr20 28832133 28832320 -43321562 + (TG)n Simple_repeat Simple_repeat 1 180 0 364 141 22 49 chr20 28832332 28832517 -43321365 + (TG)n Simple_repeat Simple_repeat 1 180 0 468 153 31 25 chr20 28832551 28833085 -43320797 + (TG)n Simple_repeat Simple_repeat 1 537 0 860 281 102 19 chr20 28834670 28835044 -43318838 + MLT1I LTR MaLR 5 409 0 369 131 0 0 chr20 28835108 28835169 -43318713 + (TGGA)n Simple_repeat Simple_repeat 4 64 0 1215 255 89 25 chr20 28836054 28836458 -43317424 + MER74B LTR ERVL 136 565 -57 6672 176 7 2 chr20 28836467 28838667 -43315215 + L1PB1 LINE L1 3937 6143 -8 1481 178 70 7 chr20 28838669 28838939 -43314943 - AluSx SINE Alu -23 289 3 680 253 51 54 chr20 28838939 28839173 -43314709 - L1M4 LINE L1 -2299 3847 3613 3198 132 78 5 chr20 28839173 28839735 -43314147 + LTR26 LTR ERV1 1 603 0 680 253 51 54 chr20 28839735 28839816 -43314066 - L1M4 LINE L1 -2533 3613 3533 1000 240 30 11 chr20 28841331 28841731 -43312151 + Charlie4a DNA MER1_type 49 493 -15 326 143 143 14 chr20 28843216 28843286 -43310596 + MLT1G1 LTR MaLR 103 181 -414 1089 241 82 11 chr20 28843286 28843651 -43310231 + L1M4 LINE L1 3626 4016 -2130 * 1986 223 85 55 chr20 28843649 28843894 -43309988 - L1MDa LINE L1 -5924 616 380 3320 182 16 3 chr20 28843894 28844510 -43309372 - L1PB4 LINE L1 -1 6155 5532 1986 223 85 55 chr20 28844510 28844842 -43309040 - L1MDa LINE L1 -6160 380 22 322 299 96 78 chr20 28844840 28845359 -43308523 - HAL1 LINE L1 -850 1657 1116 * 1238 219 131 27 chr20 28845359 28845505 -43308377 + MLT1A1 LTR MaLR 1 130 -235 2050 104 0 7 chr20 28845505 28845820 -43308062 + AluSc SINE Alu 1 313 0 1238 219 131 27 chr20 28845820 28845999 -43307883 + MLT1A1 LTR MaLR 130 362 -3 322 299 96 78 chr20 28845999 28846325 -43307557 - HAL1 LINE L1 -1391 1116 797 939 253 67 14 chr20 28846328 28846784 -43307098 + LTR33 LTR ERVL 1 513 -8 2130 173 10 30 chr20 28846875 28847273 -43306609 - MLT1B LTR MaLR 0 390 1 2198 124 50 19 chr20 28847867 28848231 -43305651 - THE1C LTR MaLR 0 375 1 315 366 98 0 chr20 28848246 28848369 -43305513 - HAL1 LINE L1 -2370 137 3 1109 188 74 220 chr20 28848716 28848987 -43304895 - L1MC3 LINE L1 -2 7993 7684 913 185 0 0 chr20 28848987 28849144 -43304738 - FRAM SINE Alu -19 157 1 1109 188 74 220 chr20 28849144 28849502 -43304380 - L1MC3 LINE L1 -311 7684 7323 2480 53 0 0 chr20 28851219 28851520 -43302362 - AluY SINE Alu -10 301 1 228 279 8 33 chr20 28851693 28851754 -43302128 + (TG)n Simple_repeat Simple_repeat 1 59 -60 966 147 32 37 chr20 28851754 28851944 -43301938 + MER53 DNA DNA 1 189 0 228 279 8 33 chr20 28851944 28852004 -43301878 + (TG)n Simple_repeat Simple_repeat 59 119 0 1074 193 218 0 chr20 28852400 28852639 -43301243 + AluJo SINE Alu 1 291 -21 44565 44 4 0 chr20 28853057 28859185 -43294697 - L1PA4 LINE L1 -2 6153 2 235 269 167 0 chr20 28860255 28860333 -43293549 + MLT1L LTR MaLR 190 280 -335 384 314 124 31 chr20 28861194 28861582 -43292300 - MLT1L LTR MaLR -2 613 190 459 277 110 0 chr20 28862902 28863057 -43290825 + MER5A DNA MER1_type 18 189 0 306 0 0 0 chr20 28863134 28863168 -43290714 + (TG)n Simple_repeat Simple_repeat 2 35 0 217 314 0 47 chr20 28863452 28863538 -43290344 - L2 LINE L2 -1 3271 3190 213 207 37 85 chr20 28865534 28865584 -43288298 + MIR SINE MIR 113 159 -103 1491 244 25 8 chr20 28865584 28865941 -43287941 - MLT1A1 LTR MaLR 0 365 3 213 207 37 85 chr20 28865941 28865972 -43287910 + MIR SINE MIR 159 190 -72 468 318 27 50 chr20 28866730 28866950 -43286932 + LTR16C LTR ERVL 127 341 -150 319 241 46 19 chr20 28866992 28867100 -43286782 + LTR16C LTR ERVL 350 460 -31 1953 221 106 8 chr20 28867621 28868133 -43285749 - REP3 LTR ERV 0 562 1 180 309 24 0 chr20 28868207 28868249 -43285633 - L2 LINE L2 -24 3289 3247 1469 220 51 61 chr20 28868260 28868655 -43285227 - MLT2B1 LTR ERVL 0 520 130 207 0 0 0 chr20 28868693 28868716 -43285166 + (CAAT)n Simple_repeat Simple_repeat 1 23 0 607 304 103 22 chr20 28870525 28870857 -43283025 + L1MC4a LINE L1 4760 5139 -1007 1048 167 12 69 chr20 28870857 28871103 -43282779 - MER46A DNA MER2_type 0 236 5 607 304 103 22 chr20 28871103 28871218 -43282664 + L1MC4a LINE L1 5139 5243 -903 442 226 60 128 chr20 28871273 28871539 -43282343 - MIR SINE MIR 0 262 15 331 322 0 0 chr20 28871542 28871657 -43282225 + (TCCA)n Simple_repeat Simple_repeat 4 118 0 1972 167 11 59 chr20 28871657 28871939 -43281943 + LTR53 LTR ERVL 1 262 -257 1728 139 26 20 chr20 28871939 28872108 -43281774 - AluJb SINE Alu -8 304 131 228 35 0 0 chr20 28872108 28872137 -43281745 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 1728 139 26 20 chr20 28872137 28872269 -43281613 - AluJb SINE Alu -181 131 1 1972 167 11 59 chr20 28872269 28872357 -43281525 + LTR53 LTR ERVL 262 353 -166 1493 183 3 10 chr20 28872552 28872842 -43281040 + AluJb SINE Alu 1 288 -24 233 194 45 30 chr20 28873519 28873586 -43280296 + MER5B DNA MER1_type 106 173 -5 338 267 113 68 chr20 28874112 28874313 -43279569 + L1MC4a LINE L1 5633 5859 -270 251 223 21 64 chr20 28874485 28874579 -43279303 + L1MC4 LINE L1 6614 6703 -1339 365 260 13 7 chr20 28874594 28874745 -43279137 + L1MC4 LINE L1 2006 6983 -1339 341 263 0 53 chr20 28874735 28874830 -43279052 + L1MC4 LINE L1 6894 6983 -1339 * 1734 163 0 0 chr20 28876179 28876467 -43277415 + AluSx SINE Alu 24 311 -1 388 275 45 110 chr20 28877540 28877740 -43276142 + MER102b DNA MER1_type 155 341 0 832 150 0 0 chr20 28879289 28879416 -43274466 + AluSq/x SINE Alu 1 127 -185 1998 110 41 0 chr20 28879454 28879744 -43274138 + AluSq SINE Alu 1 302 -11 281 342 135 31 chr20 28879746 28879968 -43273914 - L2 LINE L2 -351 2963 2719 2245 112 0 0 chr20 28879983 28880287 -43273595 - AluSq SINE Alu -9 304 1 2707 205 2 4 chr20 28880639 28881126 -43272756 - MER66B LTR ERV1 0 486 1 217 308 45 96 chr20 28881543 28881741 -43272141 - MIR SINE MIR -73 189 2 1166 284 108 55 chr20 28882067 28882791 -43271091 - L1ME LINE L1 -5178 892 131 343 307 34 45 chr20 28882820 28882996 -43270886 - MIR SINE MIR -70 192 19 824 270 32 48 chr20 28883742 28883990 -43269892 + MIR SINE MIR 19 262 0 450 276 0 0 chr20 28884031 28884194 -43269688 + (CTA)n Simple_repeat Simple_repeat 3 165 0 655 152 38 148 chr20 28884292 28884502 -43269380 + MER53 DNA DNA 3 189 0 219 36 0 0 chr20 28884558 28884586 -43269296 + (CA)n Simple_repeat Simple_repeat 2 29 0 4272 131 16 0 chr20 28885892 28886517 -43267365 + MER41B LTR ERV1 1 635 0 2330 158 77 2 chr20 28888259 28888688 -43265194 - MER65C LTR ERV1 0 461 1 2951 159 22 26 chr20 28888994 28889390 -43264492 + LTR26B LTR ERV1 1 396 -135 2557 106 30 52 chr20 28889390 28889797 -43264085 - MER48 LTR ERV1 0 398 1 2951 159 22 26 chr20 28889797 28889933 -43263949 + LTR26B LTR ERV1 396 531 0 * 2964 179 72 13 chr20 28889933 28890540 -43263342 - LTR51 LTR ERV1 -28 643 1 312 298 97 9 chr20 28890597 28890711 -43263171 - L1ME4a LINE L1 0 6121 5998 738 220 145 20 chr20 28890748 28890964 -43262918 - L1MC4 LINE L1 -6 8036 7848 2918 85 31 3 chr20 28890964 28891351 -43262531 - MER48 LTR ERV1 0 398 1 738 220 145 20 chr20 28891351 28891438 -43262444 - L1MC4 LINE L1 -194 7848 7602 922 273 11 8 chr20 28891473 28891740 -43262142 - L1MC4 LINE L1 -467 7575 7308 547 258 56 11 chr20 28892060 28892238 -43261644 - MER5A DNA MER1_type 0 189 4 204 273 78 116 chr20 28892840 28893082 -43260800 + L2 LINE L2 3040 3272 0 343 267 35 0 chr20 28893512 28893598 -43260284 + MER92A LTR ERV1 1 89 -323 1573 249 83 26 chr20 28894683 28895174 -43258708 + LTR40a LTR ERVL 1 519 0 221 286 14 0 chr20 28895647 28895717 -43258165 + MIR SINE MIR 192 262 0 * 254 310 120 0 chr20 28895676 28895818 -43258064 - MIR SINE MIR -18 244 86 409 309 115 13 chr20 28895821 28896123 -43257759 - MLT1L LTR MaLR -7 608 187 621 276 43 5 chr20 28896301 28896486 -43257396 + MER3 DNA MER1_type 18 209 0 1115 194 70 0 chr20 28896568 28896841 -43257041 - MER33 DNA MER1_type -13 311 20 518 225 73 17 chr20 28896943 28897121 -43256761 - MER5A DNA MER1_type 0 189 2 518 301 39 7 chr20 28898573 28898726 -43255156 + MER5B DNA MER1_type 21 178 0 27 29 0 0 chr20 28900759 28900793 -43253089 + GC_rich Low_complexity Low_complexity 1 34 0 24 32 0 0 chr20 28901055 28901086 -43252796 + GC_rich Low_complexity Low_complexity 1 31 0 241 192 39 0 chr20 28904075 28904127 -43249755 + MIR SINE MIR 89 142 -120 292 346 63 79 chr20 28905349 28905664 -43248218 - L2 LINE L2 -84 3229 2920 249 236 0 45 chr20 28906561 28906650 -43247232 - L1ME3 LINE L1 -1 6161 6080 186 344 264 0 chr20 28908937 28909100 -43244782 - MIR SINE MIR -10 252 47 444 325 94 63 chr20 28909352 28909810 -43244072 + L2 LINE L2 2838 3309 -4 252 0 0 0 chr20 28909903 28909931 -43243951 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 294 274 191 45 chr20 28911855 28912012 -43241870 - MER5A DNA MER1_type -2 187 8 21 0 0 0 chr20 28912872 28912893 -43240989 + AT_rich Low_complexity Low_complexity 1 21 0 442 221 71 0 chr20 28917159 28917272 -43236610 - MER45A DNA AcHobo 0 178 58 731 251 47 38 chr20 28919280 28919515 -43234367 + MIR SINE MIR 18 254 -8 187 359 31 0 chr20 28919561 28919625 -43234257 + L2 LINE L2 3199 3264 -8 423 315 15 0 chr20 28919728 28919858 -43234024 - MIR SINE MIR -75 187 56 214 294 160 8 chr20 28919900 28920019 -43233863 + MIR SINE MIR 52 188 -74 1607 184 7 34 chr20 28920252 28920546 -43233336 - AluJb SINE Alu -26 286 1 4957 192 55 34 chr20 28921019 28922685 -43231197 + L1MB8 LINE L1 4004 5725 -453 2296 116 0 10 chr20 28922685 28922987 -43230895 - AluSc SINE Alu -10 299 1 4957 192 55 34 chr20 28922987 28923445 -43230437 + L1MB8 LINE L1 5725 6172 -6 1478 218 26 47 chr20 28923939 28924407 -43229475 - Charlie4a DNA MER1_type -18 490 33 3758 149 64 5 chr20 28925105 28925776 -43228106 + MER50 LTR ERV1 1 711 -23 437 206 33 0 chr20 28926339 28926431 -43227451 - MER58B DNA MER1_type -19 322 228 243 242 32 0 chr20 28926453 28926515 -43227367 - MLT1F LTR MaLR -3 539 476 482 153 31 0 chr20 28927882 28927980 -43225902 + MER5A DNA MER1_type 9 109 -80 767 193 29 0 chr20 28928197 28928337 -43225545 + MER5A DNA MER1_type 43 186 -3 1175 190 36 12 chr20 28928789 28929036 -43224846 - MER58B DNA MER1_type -88 253 1 952 168 199 78 chr20 28929843 28930165 -43223717 - MLT1D LTR MaLR 0 505 145 22 0 0 0 chr20 28930390 28930412 -43223470 + AT_rich Low_complexity Low_complexity 1 22 0 468 327 128 5 chr20 28931843 28932054 -43221828 - MIR SINE MIR -12 250 14 1258 258 41 21 chr20 28932220 28932655 -43221227 + L1ME2 LINE L1 5711 6154 -10 433 275 7 35 chr20 28933200 28933342 -43220540 + MIR SINE MIR 19 156 -106 1250 194 52 49 chr20 28933709 28934033 -43219849 + MER76 LTR ERV 364 688 0 380 222 0 0 chr20 28934072 28934162 -43219720 + L1M4 LINE L1 5152 5241 -905 1101 110 30 0 chr20 28934170 28934334 -43219548 - Tigger3(Golem) DNA MER2_type -20 3009 2841 426 105 0 0 chr20 28984336 28984393 -43169489 - Alu SINE Alu -252 58 2 391 235 39 33 chr20 28984447 28984600 -43169282 - HAL1 LINE L1 -105 2402 2249 30 45 0 0 chr20 28984743 28984787 -43169095 + AT_rich Low_complexity Low_complexity 1 44 0 865 315 164 33 chr20 28985128 28985356 -43168526 - L1 LINE L1 -2145 4001 3804 1830 183 3 0 chr20 28985356 28985667 -43168215 - AluJb SINE Alu 0 312 1 865 315 164 33 chr20 28985667 28986384 -43167498 - L1 LINE L1 -2342 3804 2932 731 142 8 24 chr20 28986567 28986694 -43167188 - FLAM_C SINE Alu -7 126 2 1907 114 23 0 chr20 28986706 28986968 -43166914 - AluSx SINE Alu -18 294 27 424 341 103 13 chr20 28986970 28987348 -43166534 - L1 LINE L1 -3435 2711 2300 232 213 0 0 chr20 28987413 28987460 -43166422 + MLT1I LTR MaLR 93 139 -270 313 301 23 40 chr20 28987674 28987847 -43166035 - L1 LINE L1 -3840 2306 2137 424 301 61 27 chr20 28988253 28988549 -43165333 - HAL1b LINE L1 -824 524 219 1782 121 39 0 chr20 28989008 28989290 -43164592 - L1PA16 LINE L1 -5 6161 5869 882 170 6 0 chr20 28990801 28990972 -43162910 - L1MA6 LINE L1 -5 6295 6124 181 200 50 0 chr20 28992056 28992096 -43161786 + L2 LINE L2 3227 3268 -4 332 339 85 26 chr20 28992623 28992812 -43161070 + MIR SINE MIR 43 242 -20 1012 201 98 126 chr20 28993244 28993442 -43160440 - L1MB8 LINE L1 -10 6168 5966 1207 182 97 57 chr20 28993442 28993793 -43160089 - MLT1A1 LTR MaLR 0 365 1 1012 201 98 126 chr20 28993793 28993972 -43159910 - L1MB8 LINE L1 -212 5966 5784 2054 112 7 7 chr20 28993972 28994268 -43159614 - AluSx SINE Alu -16 296 1 1012 201 98 126 chr20 28994268 28994411 -43159471 - L1MB8 LINE L1 -394 5784 5639 1524 120 127 40 chr20 28994411 28994687 -43159195 - AluSx SINE Alu -12 300 1 1012 201 98 126 chr20 28994687 28994937 -43158945 - L1MB8 LINE L1 -539 5639 5417 475 327 42 14 chr20 28995017 28995253 -43158629 - MIR SINE MIR -1 261 23 310 309 56 60 chr20 28995563 28995796 -43158086 + L3 LINE CR1 1331 1562 -15 2309 102 0 0 chr20 28996092 28996387 -43157495 - AluSq SINE Alu -18 295 1 492 259 168 22 chr20 28996387 28996572 -43157310 + MIR SINE MIR 48 259 -3 1940 128 3 3 chr20 28997776 28998109 -43155773 - AluSx SINE Alu 0 333 1 217 300 158 33 chr20 28998225 28998297 -43155585 + L2 LINE L2 2594 2656 -658 897 53 76 38 chr20 28998297 28998429 -43155453 + MER85 DNA T2_type 2 138 -1 217 300 158 33 chr20 28998429 28998476 -43155406 + L2 LINE L2 2656 2728 -586 872 271 65 60 chr20 28998521 28998935 -43154947 + L2 LINE L2 2898 3313 0 1931 114 18 0 chr20 28999195 28999467 -43154415 - AluSg SINE Alu -33 277 1 1590 221 19 11 chr20 29000127 29000489 -43153393 - MLT1A1 LTR MaLR 0 365 1 211 211 19 39 chr20 29000557 29000609 -43153273 - MIR SINE MIR -189 73 23 1481 102 46 141 chr20 29000736 29000853 -43153029 + AluJo SINE Alu 23 150 -162 2120 115 0 14 chr20 29000853 29001149 -43152733 - AluSx SINE Alu -20 292 1 1481 102 46 141 chr20 29001149 29001336 -43152546 + AluJo SINE Alu 150 298 -14 529 292 102 9 chr20 29001802 29002018 -43151864 - MER46C DNA MER2_type -83 255 20 321 276 149 29 chr20 29003524 29003698 -43150184 + L1ME4a LINE L1 5869 6063 -58 1013 254 116 90 chr20 29005127 29006210 -43147672 + L2 LINE L2 2187 3313 0 812 116 7 43 chr20 29006885 29007023 -43146859 + FLAM_C SINE Alu 1 133 0 1440 193 4 14 chr20 29007048 29007323 -43146559 - AluJo SINE Alu -40 272 1 468 300 13 33 chr20 29007492 29007642 -43146240 + L2 LINE L2 3121 3267 -5 1259 208 78 11 chr20 29007868 29008152 -43145730 + MER58B DNA MER1_type 39 341 0 1945 97 22 7 chr20 29008370 29008675 -43145207 - AluSq SINE Alu 0 309 1 519 312 36 53 chr20 29008934 29009271 -43144611 - MLT1J1 LTR MaLR -101 345 15 3882 192 58 14 chr20 29009835 29011375 -43142507 - L1MB7 LINE L1 -16 6168 4563 2033 212 98 13 chr20 29011380 29011422 -43142460 - MLT2B1 LTR ERVL -8 512 475 288 91 0 0 chr20 29011422 29011466 -43142416 + (TG)n Simple_repeat Simple_repeat 2 45 0 2033 212 98 13 chr20 29011466 29011895 -43141987 - MLT2B1 LTR ERVL -45 475 1 2936 210 19 23 chr20 29011895 29012591 -43141291 - L1MB7 LINE L1 -1581 4565 3873 256 75 50 0 chr20 29012600 29012640 -43141242 - L1MDa LINE L1 -2228 4312 4271 * 720 166 20 7 chr20 29012625 29012776 -43141106 - L1MDa LINE L1 -2203 4337 4185 1468 247 20 14 chr20 29012788 29013132 -43140750 - MER77 LTR ERV1 -6 599 254 985 198 44 0 chr20 29013132 29013359 -43140523 - L1MDa LINE L1 -2367 4173 3937 976 215 119 31 chr20 29013363 29013917 -43139965 - L1MDa LINE L1 -2963 3577 2975 369 62 0 0 chr20 29013918 29013966 -43139916 + (TC)n Simple_repeat Simple_repeat 1 48 0 975 157 0 6 chr20 29013966 29014132 -43139750 - AluSx SINE Alu 0 312 148 657 163 0 0 chr20 29014132 29014230 -43139652 - AluSx SINE Alu -214 99 2 1446 190 79 20 chr20 29014233 29014565 -43139317 - L1MDa LINE L1 -3553 2987 2605 2003 137 3 0 chr20 29014565 29014871 -43139011 - AluSx SINE Alu -5 307 1 1446 190 79 20 chr20 29014871 29015057 -43138825 - L1MDa LINE L1 -3935 2605 2431 1360 154 36 24 chr20 29015057 29015304 -43138578 - AluJb SINE Alu 0 312 63 813 163 0 0 chr20 29015305 29015428 -43138454 - AluJb SINE Alu -188 124 2 6811 201 143 60 chr20 29015432 29015456 -43138426 - L1MDa LINE L1 -4135 2405 2384 1248 219 4 8 chr20 29015456 29015693 -43138189 + MER8 DNA MER2_type 1 236 -3 6811 201 143 60 chr20 29015693 29016185 -43137697 - L1MDa LINE L1 -4156 2384 1934 548 131 0 24 chr20 29016185 29016269 -43137613 - AluS SINE Alu -225 87 6 6811 201 143 60 chr20 29016269 29016529 -43137353 - L1MDa LINE L1 -4606 1934 1697 2168 106 0 0 chr20 29016529 29016831 -43137051 - AluSc SINE Alu -7 302 1 6811 201 143 60 chr20 29016831 29018191 -43135691 - L1MDa LINE L1 -4843 1697 1 728 153 34 17 chr20 29018691 29018809 -43135073 + 5S rRNA rRNA 1 120 -1 2081 118 0 7 chr20 29018879 29019183 -43134699 + AluSx SINE Alu 1 302 -10 2241 93 3 0 chr20 29020588 29020888 -43132994 + AluSc SINE Alu 1 301 -8 25 0 0 0 chr20 29020888 29020913 -43132969 + AT_rich Low_complexity Low_complexity 1 25 0 2132 105 0 0 chr20 29020962 29021279 -43132603 + AluSq SINE Alu 1 317 0 1551 171 0 42 chr20 29021364 29021673 -43132209 - AluJb SINE Alu -16 296 1 3206 135 38 0 chr20 29026050 29026525 -43127357 + MER1A DNA MER1_type 37 529 0 323 346 99 9 chr20 29032041 29032373 -43121509 - L1ME4a LINE L1 -176 5945 5584 288 154 0 0 chr20 29034376 29034428 -43119454 + CT-rich Low_complexity Low_complexity 1 52 0 224 200 117 0 chr20 29035941 29036001 -43117881 + MIR SINE MIR 74 140 -122 198 200 0 0 chr20 29036077 29036112 -43117770 - MIR SINE MIR -102 160 126 22 35 0 0 chr20 29037591 29037620 -43116262 + GC_rich Low_complexity Low_complexity 1 29 0 659 234 208 4 chr20 29038241 29038510 -43115372 + MER110A LTR ERV1 144 467 -1 3106 169 86 14 chr20 29038539 29039201 -43114681 + MER67C LTR ERV1 1 710 0 278 95 0 0 chr20 29039216 29039258 -43114624 + L2 LINE L2 3272 3313 0 1923 107 3 31 chr20 29039396 29039531 -43114351 + AluSx SINE Alu 1 138 -174 2033 129 0 0 chr20 29039531 29039825 -43114057 + AluSx SINE Alu 1 294 -18 1923 107 3 31 chr20 29039825 29039979 -43113903 + AluSx SINE Alu 138 282 -30 3381 175 41 37 chr20 29040065 29040795 -43113087 + MER49 LTR ERV1 184 916 -7 469 223 112 28 chr20 29040966 29041181 -43112701 + L1ME4a LINE L1 5683 5915 -206 185 0 40 0 chr20 29042137 29042162 -43111720 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 1515 81 0 0 chr20 29042162 29042360 -43111522 - AluSg/x SINE Alu -33 277 80 545 282 144 40 chr20 29043519 29043867 -43110015 - MLT1J LTR MaLR -4 507 124 187 186 23 23 chr20 29044427 29044470 -43109412 + MER5B DNA MER1_type 34 76 -102 888 128 0 8 chr20 29044483 29044616 -43109266 + AluSg/x SINE Alu 128 259 -53 441 0 0 0 chr20 29044643 29044692 -43109190 + (CA)n Simple_repeat Simple_repeat 1 49 0 271 250 66 13 chr20 29044705 29044781 -43109101 - MER5B DNA MER1_type -96 82 3 2044 110 7 0 chr20 29046073 29046363 -43107519 - AluSx SINE Alu -20 292 1 315 223 0 87 chr20 29046366 29046469 -43107413 - MER2 DNA MER2_type -251 94 1 333 302 22 36 chr20 29047391 29047407 -43106475 - MIR SINE MIR -27 235 220 1793 142 30 26 chr20 29047407 29047746 -43106136 + MER2 DNA MER2_type 1 340 -4 333 302 22 36 chr20 29047746 29047868 -43106014 - MIR SINE MIR -42 220 99 248 270 80 58 chr20 29050246 29050383 -43103499 - MIR SINE MIR -13 249 110 308 269 0 0 chr20 29050569 29050636 -43103246 + L2 LINE L2 3242 3308 -5 1463 201 26 27 chr20 29050749 29051188 -43102694 - LTR2B LTR ERV1 0 490 1 295 295 215 16 chr20 29051285 29051536 -43102346 + MLT1K LTR MaLR 225 525 -63 504 345 11 0 chr20 29051605 29051782 -43102100 + MIR SINE MIR 76 254 -8 223 202 3 0 chr20 29052387 29052433 -43101449 + MIR SINE MIR 108 155 -53 344 326 0 0 chr20 29053075 29053167 -43100715 + (CA)n Simple_repeat Simple_repeat 2 93 0 332 349 80 11 chr20 29053200 29053464 -43100418 + MLT1G1 LTR MaLR 1 282 -313 655 202 8 0 chr20 29053549 29053668 -43100214 + MLT1G1 LTR MaLR 461 580 -15 2090 105 17 3 chr20 29053829 29054125 -43099757 + AluSg SINE Alu 1 300 -10 677 237 163 41 chr20 29054770 29055040 -43098842 - LTR16C LTR ERVL 0 491 189 3349 184 66 10 chr20 29055539 29055933 -43097949 + L1MB5 LINE L1 5415 5785 -389 1584 208 13 3 chr20 29055933 29056231 -43097651 + AluJo SINE Alu 1 301 -11 3349 184 66 10 chr20 29056231 29056547 -43097335 + L1MB5 LINE L1 5785 6165 -9 184 120 0 80 chr20 29056929 29056979 -43096903 + MIR3 SINE MIR 9 54 -154 740 276 142 3 chr20 29057857 29058180 -43095702 + LTR16C LTR ERVL 107 474 -17 449 259 142 6 chr20 29058337 29058499 -43095383 - MER5A DNA MER1_type -5 184 1 2315 114 3 0 chr20 29058617 29058923 -43094959 - AluSx SINE Alu -5 307 1 23 0 0 0 chr20 29059810 29059833 -43094049 + AT_rich Low_complexity Low_complexity 1 23 0 329 261 8 30 chr20 29059939 29060073 -43093809 - HAL1 LINE L1 -116 2391 2261 770 306 95 3 chr20 29060284 29060611 -43093271 + MLT1J LTR MaLR 32 388 -123 448 272 117 93 chr20 29061196 29061520 -43092362 - HAL1 LINE L1 -1160 1347 1016 395 185 12 12 chr20 29061610 29061691 -43092191 + MIR SINE MIR 31 111 -151 421 223 54 39 chr20 29061776 29061906 -43091976 + MLT1G1 LTR MaLR 2 133 -462 232 182 23 0 chr20 29061964 29062008 -43091874 + CT-rich Low_complexity Low_complexity 1 45 0 349 201 201 95 chr20 29062015 29062194 -43091688 + MLT1G1 LTR MaLR 210 407 -188 1843 132 74 15 chr20 29062855 29063373 -43090509 - MER51A LTR ERV1 -9 625 1 243 0 0 0 chr20 29063474 29063501 -43090381 + (TTTTA)n Simple_repeat Simple_repeat 4 30 0 180 77 0 0 chr20 29063502 29063528 -43090354 + (TTTA)n Simple_repeat Simple_repeat 4 29 0 2341 82 0 0 chr20 29063528 29063809 -43090073 - AluSq SINE Alu -32 281 1 435 149 0 0 chr20 29064312 29064386 -43089496 + (CTG)n Simple_repeat Simple_repeat 2 75 0 506 204 171 17 chr20 29064467 29064648 -43089234 - LTR16A LTR ERVL -5 445 237 220 255 0 0 chr20 29064901 29064948 -43088934 - MIR SINE MIR -160 102 56 257 209 30 0 chr20 29065701 29065768 -43088114 - LTR16C LTR ERVL -60 431 363 2277 128 7 0 chr20 29065771 29066076 -43087806 + AluSx SINE Alu 1 307 -5 231 228 89 0 chr20 29067853 29067932 -43085950 + LTR16A1 LTR ERVL 12 97 -360 396 278 115 19 chr20 29067954 29068163 -43085719 + LTR16A1 LTR ERVL 228 456 -1 261 287 49 63 chr20 29068322 29068465 -43085417 - MER5A DNA MER1_type 0 189 49 312 107 20 0 chr20 29068787 29068843 -43085039 - MLT2B2 LTR ERVL -5 510 403 33 85 0 0 chr20 29068862 29068944 -43084938 + AT_rich Low_complexity Low_complexity 1 82 0 1686 204 38 25 chr20 29068948 29069525 -43084357 - MLT2B1 LTR ERVL -46 474 1 322 272 25 0 chr20 29070806 29070887 -43082995 - MIR SINE MIR -78 184 102 827 301 18 4 chr20 29071032 29071261 -43082621 + MLT2E LTR ERVL 58 289 -339 2151 121 0 0 chr20 29072051 29072364 -43081518 - AluSx SINE Alu 0 315 3 551 285 84 4 chr20 29072561 29072810 -43081072 - LTR16A LTR ERVL -125 325 57 618 256 119 0 chr20 29073411 29073571 -43080311 - MLT1J LTR MaLR -316 195 17 1054 250 77 81 chr20 29073595 29073899 -43079983 - L1ME2 LINE L1 -199 5965 5662 1963 117 3 24 chr20 29073899 29074190 -43079692 - AluSq SINE Alu -23 290 6 1054 250 77 81 chr20 29074190 29074353 -43079529 - L1ME2 LINE L1 -502 5662 5500 434 313 8 0 chr20 29074465 29074593 -43079289 + MER5B DNA MER1_type 18 146 -32 702 302 92 23 chr20 29074908 29075299 -43078583 + L2 LINE L2 2031 2448 -866 1639 213 121 11 chr20 29075308 29075754 -43078128 + MLT1D LTR MaLR 7 501 -4 424 241 27 0 chr20 29075765 29075877 -43078005 + L2 LINE L2 2460 2574 -740 1983 139 25 42 chr20 29075894 29076296 -43077586 - LTR56 LTR ERV1 0 445 51 204 113 38 57 chr20 29076301 29076333 -43077549 + T-rich Low_complexity Low_complexity 1 33 -19 429 123 9 85 chr20 29076333 29076439 -43077443 - L1MC2 LINE L1 0 6344 6247 204 113 38 57 chr20 29076439 29076459 -43077423 + T-rich Low_complexity Low_complexity 33 52 0 4807 117 10 18 chr20 29076466 29077253 -43076629 - L1PB3 LINE L1 -1 6153 5373 232 180 40 0 chr20 29077253 29077303 -43076579 - LTR56 LTR ERV1 -385 60 9 180 282 14 0 chr20 29077308 29077379 -43076503 + L2 LINE L2 2557 2628 -686 1182 271 124 31 chr20 29077381 29077834 -43076048 + MLT1J LTR MaLR 4 498 -13 788 307 69 26 chr20 29077855 29078316 -43075566 + L2 LINE L2 2638 3138 -175 4198 156 89 7 chr20 29078316 29079079 -43074803 + LTR1B LTR ERV1 1 826 0 788 307 69 26 chr20 29079079 29079261 -43074621 + L2 LINE L2 3138 3311 -2 2056 137 7 7 chr20 29079400 29079707 -43074175 + AluSx SINE Alu 1 307 -5 881 208 42 9 chr20 29079789 29080001 -43073881 + MER20 DNA MER1_type 1 219 0 198 0 0 0 chr20 29081337 29081359 -43072523 + (A)n Simple_repeat Simple_repeat 1 22 0 2149 148 0 0 chr20 29081360 29081671 -43072211 + AluSq SINE Alu 1 311 -2 808 207 53 0 chr20 29082443 29082612 -43071270 + MER45A DNA AcHobo 1 178 0 275 283 0 30 chr20 29083763 29083862 -43070020 + LTR67 LTR ERVL 457 552 -5 549 274 214 29 chr20 29084846 29085112 -43068770 + MLT1H LTR MaLR 57 272 -277 189 0 0 0 chr20 29085112 29085133 -43068749 + (CAGCC)n Simple_repeat Simple_repeat 5 25 0 549 274 214 29 chr20 29085133 29085282 -43068600 + MLT1H LTR MaLR 272 549 0 1677 192 51 0 chr20 29085417 29085709 -43068173 + AluJo SINE Alu 3 309 -3 345 225 9 99 chr20 29085760 29085871 -43068011 + L1MC4 LINE L1 6614 6714 -1328 228 406 71 18 chr20 29086875 29087045 -43066837 + L2 LINE L2 3093 3271 -1 340 279 116 100 chr20 29087815 29087934 -43065948 - L2 LINE L2 0 3313 3197 210 91 0 0 chr20 29087934 29087967 -43065915 + (CA)n Simple_repeat Simple_repeat 2 34 0 340 279 116 100 chr20 29087967 29088356 -43065526 - L2 LINE L2 -116 3197 2797 206 280 112 16 chr20 29088763 29088888 -43064994 - L2 LINE L2 -990 2324 2188 714 226 168 10 chr20 29089920 29090219 -43063663 - MLT1G LTR MaLR -7 583 163 446 183 35 22 chr20 29090222 29090455 -43063427 + GA-rich Low_complexity Low_complexity 1 236 0 213 178 0 0 chr20 29090476 29090521 -43063361 + G-rich Low_complexity Low_complexity 5 49 0 233 304 168 0 chr20 29090563 29090724 -43063158 - MLT1G LTR MaLR -407 188 1 1014 209 79 13 chr20 29091204 29091721 -43062161 - MER92B LTR ERV1 -3 633 38 211 216 0 0 chr20 29091721 29091772 -43062110 + T-rich Low_complexity Low_complexity 1 51 0 7219 31 0 0 chr20 29091773 29093318 -43060564 - L1PA4 LINE L1 -1 6154 4608 236 263 144 31 chr20 29095243 29095437 -43058445 + LTR33 LTR ERVL 306 521 0 2289 127 0 0 chr20 29095453 29095896 -43057986 + AluSx SINE Alu 1 443 0 516 89 0 0 chr20 29096288 29096367 -43057515 + (GA)n Simple_repeat Simple_repeat 1 79 0 950 192 0 0 chr20 29097455 29097611 -43056271 - FRAM SINE Alu -20 156 1 668 277 49 28 chr20 29097913 29098205 -43055677 + MLT1H1 LTR MaLR 11 351 -244 1116 177 63 11 chr20 29098241 29098512 -43055370 - MLT1C LTR MaLR -12 455 171 1212 101 6 22 chr20 29098513 29098691 -43055191 + LTR9 LTR ERV1 438 612 0 3603 157 16 10 chr20 29098706 29099312 -43054570 + HUERS-P3 LTR ERV1 15 624 -8295 1641 99 13 9 chr20 29099318 29099551 -43054331 + LTR9 LTR ERV1 293 526 -86 933 140 39 28 chr20 29099562 29099741 -43054141 - MLT1C LTR MaLR -286 181 1 246 350 10 19 chr20 29100414 29100517 -43053365 - MIR SINE MIR -110 152 51 264 247 0 0 chr20 29101855 29101940 -43051942 + (TG)n Simple_repeat Simple_repeat 2 86 0 2185 129 0 10 chr20 29103234 29103545 -43050337 - AluSp SINE Alu -5 308 1 1282 188 58 0 chr20 29103653 29103893 -43049989 + MER54B LTR ERVL 514 767 -26 466 290 159 22 chr20 29104587 29105409 -43048473 - L2 LINE L2 -3 3310 2293 1240 153 59 81 chr20 29106712 29106869 -43047013 - AluJo SINE Alu -12 300 152 1772 152 14 10 chr20 29106869 29107165 -43046717 - AluJb SINE Alu -15 297 1 1240 153 59 81 chr20 29107165 29107314 -43046568 - AluJo SINE Alu -160 152 1 1728 47 0 0 chr20 29107332 29107543 -43046339 - L1PA4 LINE L1 -3 6152 5942 248 282 12 0 chr20 29107543 29107628 -43046254 - MER58B DNA MER1_type -9 332 247 780 194 92 0 chr20 29107729 29107946 -43045936 - Charlie5 DNA MER1_type -27 2585 2349 599 222 0 6 chr20 29108169 29108349 -43045533 + (TG)n Simple_repeat Simple_repeat 2 180 0 270 200 70 113 chr20 29110323 29110438 -43043444 + MLT1I LTR MaLR 287 396 -13 2061 120 0 0 chr20 29110618 29110959 -43042923 + AluSx SINE Alu 1 341 0 315 254 36 9 chr20 29112099 29112209 -43041673 + LTR16A1 LTR ERVL 367 455 -2 280 216 45 54 chr20 29113320 29113431 -43040451 + MLT1K LTR MaLR 477 586 -2 814 148 7 27 chr20 29113462 29113611 -43040271 - FRAM SINE Alu 0 176 31 581 78 0 0 chr20 29114018 29114095 -43039787 - Alu SINE Alu -233 78 2 261 222 83 65 chr20 29114743 29114851 -43039031 + L2 LINE L2 3197 3306 -7 1512 179 3 13 chr20 29115407 29115708 -43038174 + AluJb SINE Alu 14 311 -1 223 348 11 0 chr20 29115969 29116061 -43037821 + L3 LINE CR1 696 788 -789 278 301 41 0 chr20 29116069 29116142 -43037740 - L3 LINE CR1 -88 1489 1414 1189 180 65 29 chr20 29116209 29116487 -43037395 - L1MA9 LINE L1 -22 6290 6003 180 289 184 0 chr20 29116544 29116620 -43037262 - MER5B DNA MER1_type -15 163 74 1292 223 144 3 chr20 29116627 29117003 -43036879 + MER63B DNA MER1_type 1 429 -7 1020 141 0 0 chr20 29117514 29117691 -43036191 + (GGGA)n Simple_repeat Simple_repeat 4 180 0 295 269 96 58 chr20 29117794 29117950 -43035932 - MIR SINE MIR -45 217 56 319 274 26 26 chr20 29118171 29118284 -43035598 + MLT1F1 LTR MaLR 35 147 -420 348 152 0 0 chr20 29118460 29118526 -43035356 + (TG)n Simple_repeat Simple_repeat 1 66 0 1308 212 71 33 chr20 29119259 29119627 -43034255 - MLT1C LTR MaLR 0 467 86 228 279 93 70 chr20 29120585 29120757 -43033125 - MIR SINE MIR -69 193 18 376 241 264 0 chr20 29121715 29121889 -43031993 + HAL1 LINE L1 1317 1536 -971 808 131 0 148 chr20 29121914 29122117 -43031765 + AluSg/x SINE Alu 134 310 0 1775 268 82 11 chr20 29122119 29122171 -43031711 + HAL1 LINE L1 1548 1595 -912 1916 179 45 8 chr20 29122171 29122523 -43031359 - MLT1A1 LTR MaLR 0 365 1 1775 268 82 11 chr20 29122523 29123093 -43030789 + HAL1 LINE L1 1595 2214 -293 270 194 0 0 chr20 29123107 29123169 -43030713 + (TG)n Simple_repeat Simple_repeat 1 62 0 421 278 26 64 chr20 29123716 29123982 -43029900 + HAL1 LINE L1 2241 2496 -11 23 33 0 0 chr20 29124297 29124327 -43029555 + AT_rich Low_complexity Low_complexity 1 30 0 248 271 0 0 chr20 29124330 29124389 -43029493 - MIR SINE MIR 0 262 204 207 0 0 0 chr20 29124389 29124412 -43029470 + (T)n Simple_repeat Simple_repeat 1 23 0 8084 8 0 0 chr20 29125057 29126406 -43027476 - L1PA2 LINE L1 0 6155 4806 209 329 24 0 chr20 29126428 29126510 -43027372 - MIR SINE MIR -77 185 102 1746 191 24 58 chr20 29126816 29127046 -43026836 - MLT1B LTR MaLR -21 369 156 1791 111 0 0 chr20 29127046 29127298 -43026584 - AluSx SINE Alu 0 312 61 1746 191 24 58 chr20 29127298 29127449 -43026433 - MLT1B LTR MaLR -234 156 1 552 262 49 0 chr20 29128361 29128525 -43025357 + MER5A DNA MER1_type 10 181 -8 1909 119 20 7 chr20 29128717 29129019 -43024863 - AluSx SINE Alu -6 306 1 233 253 44 55 chr20 29129334 29129425 -43024457 + MER5B DNA MER1_type 1 90 -88 451 242 8 47 chr20 29129491 29129619 -43024263 - LTR16C LTR ERVL -2 489 367 401 226 16 24 chr20 29129843 29129967 -43023915 + GA-rich Low_complexity Low_complexity 4 126 0 530 29 0 14 chr20 29130960 29131029 -43022853 + (GGATG)n Simple_repeat Simple_repeat 2 69 0 347 319 38 38 chr20 29131619 29131804 -43022078 - L2 LINE L2 -1 3312 3128 2180 169 97 13 chr20 29131808 29132274 -43021608 - LTR22 LTR ERVK -4 505 1 373 138 15 0 chr20 29132479 29132544 -43021338 - MER41B LTR ERV1 -88 547 482 611 282 29 0 chr20 29133960 29134130 -43019752 + MER34B-int LTR ERV1 6100 6274 -57 771 250 79 64 chr20 29134168 29134710 -43019172 + MER34B LTR ERV1 11 551 -14 261 218 182 47 chr20 29136123 29136270 -43017612 - MIR SINE MIR -68 194 32 204 273 78 13 chr20 29136388 29136465 -43017417 + MIR SINE MIR 61 142 -66 238 269 0 0 chr20 29136850 29136902 -43016980 - MER5A DNA MER1_type -129 60 9 24 0 0 0 chr20 29137569 29137593 -43016289 + AT_rich Low_complexity Low_complexity 1 24 0 375 294 20 0 chr20 29138220 29138322 -43015560 - MIR SINE MIR -106 156 53 293 175 18 0 chr20 29138757 29138801 -43015081 - MLT2B2 LTR ERVL 0 515 471 11977 116 50 19 chr20 29138801 29140018 -43013864 + Tigger1 DNA MER2_type 1 1300 -1118 252 0 0 0 chr20 29140018 29140046 -43013836 + (CA)n Simple_repeat Simple_repeat 1 28 0 11977 116 50 19 chr20 29140046 29140733 -43013149 + Tigger1 DNA MER2_type 1300 1964 -454 402 260 20 13 chr20 29140776 29140926 -43012956 - L1MC4 LINE L1 0 8042 7892 318 253 0 0 chr20 29140963 29141038 -43012844 - L1MC4 LINE L1 -126 7916 7842 622 176 15 23 chr20 29141040 29141171 -43012711 - Tigger1 DNA MER2_type -522 1896 1767 331 233 135 38 chr20 29141173 29141306 -43012576 - L1ME4a LINE L1 -33 6088 5943 3287 113 9 0 chr20 29141345 29141807 -43012075 + Tigger1 DNA MER2_type 1952 2417 -1 1454 219 120 81 chr20 29141819 29142276 -43011606 - MLT2B2 LTR ERVL -40 475 1 282 246 0 46 chr20 29142277 29142293 -43011589 + L2 LINE L2 3209 3224 -89 1754 169 68 0 chr20 29142293 29142619 -43011263 + MER7A DNA MER2_type 1 346 0 282 246 0 46 chr20 29142619 29142667 -43011215 + L2 LINE L2 3224 3270 -43 23 0 0 0 chr20 29143751 29143774 -43010108 + AT_rich Low_complexity Low_complexity 1 23 0 204 40 0 0 chr20 29143882 29143907 -43009975 + (TTAA)n Simple_repeat Simple_repeat 4 28 0 216 97 0 0 chr20 29143932 29143963 -43009919 + (TTTTG)n Simple_repeat Simple_repeat 5 35 0 1609 160 41 20 chr20 29144023 29144316 -43009566 + AluJo SINE Alu 1 299 -13 544 134 0 12 chr20 29144327 29144430 -43009452 - AluSg/x SINE Alu 0 305 204 31 0 0 0 chr20 29144430 29144461 -43009421 + AT_rich Low_complexity Low_complexity 1 31 0 25 0 0 0 chr20 29144820 29144845 -43009037 + AT_rich Low_complexity Low_complexity 1 25 0 537 252 7 37 chr20 29144856 29144991 -43008891 + FLAM_C SINE Alu 3 133 0 498 71 94 0 chr20 29145135 29145275 -43008607 + GA-rich Low_complexity Low_complexity 1 153 0 410 292 90 6 chr20 29145519 29145697 -43008185 - LTR16C LTR ERVL 0 491 299 182 235 0 59 chr20 29146608 29146659 -43007223 + L2 LINE L2 589 636 -2678 6485 86 26 21 chr20 29146815 29148158 -43005724 - L1PA11 LINE L1 0 6174 4827 1010 207 159 45 chr20 29198158 29198511 -42955371 + MLT1D LTR MaLR 113 505 0 183 274 20 0 chr20 29199753 29199804 -42954078 - MIR SINE MIR 0 262 211 550 263 111 78 chr20 29199895 29200290 -42953592 - MLT1J LTR MaLR -59 452 45 470 181 13 9 chr20 29200634 29200867 -42953015 + (TG)n Simple_repeat Simple_repeat 1 234 0 357 220 11 6 chr20 29200897 29201074 -42952808 + (TG)n Simple_repeat Simple_repeat 2 179 0 271 214 16 0 chr20 29201119 29201245 -42952637 + (TG)n Simple_repeat Simple_repeat 2 129 0 649 263 42 24 chr20 29202730 29202943 -42950939 + MER58A DNA MER1_type 7 223 -1 591 206 9 9 chr20 29203978 29204202 -42949680 + (TGGA)n Simple_repeat Simple_repeat 1 224 0 248 299 17 43 chr20 29205534 29205651 -42948231 - MLT1K LTR MaLR -222 366 253 330 87 0 0 chr20 29205689 29205735 -42948147 + (CA)n Simple_repeat Simple_repeat 2 47 0 357 282 153 32 chr20 29205755 29205971 -42947911 - LTR16C LTR ERVL -238 253 12 473 263 44 22 chr20 29206176 29206313 -42947569 + MIR SINE MIR 121 260 -2 403 259 14 21 chr20 29206507 29206650 -42947232 - L1MD3 LINE L1 -19 7976 7835 361 269 0 0 chr20 29206656 29206749 -42947133 - L1MD2 LINE L1 -232 6127 6035 767 142 24 0 chr20 29206946 29207073 -42946809 + L1PB1 LINE L1 6012 6141 -10 597 137 11 0 chr20 29206978 29207073 -42946809 + L1PB1 LINE L1 6046 6172 0 219 32 32 0 chr20 29207073 29207104 -42946778 + (TAA)n Simple_repeat Simple_repeat 2 180 0 921 223 104 73 chr20 29207290 29207364 -42946518 + L1ME3A LINE L1 5593 5663 -507 2336 86 36 10 chr20 29207364 29207668 -42946214 + AluSq SINE Alu 1 312 -1 921 223 104 73 chr20 29207668 29207978 -42945904 + L1ME3A LINE L1 5663 5989 -181 270 291 91 0 chr20 29207982 29208092 -42945790 + MIR SINE MIR 126 245 -17 2124 204 44 48 chr20 29208509 29208569 -42945313 + MER68 LTR ERV1 1 60 -502 2356 97 0 7 chr20 29208569 29208879 -42945003 + AluSc SINE Alu 1 308 -1 2124 204 44 48 chr20 29208879 29209382 -42944500 + MER68 LTR ERV1 60 562 0 1634 164 3 84 chr20 29209570 29209905 -42943977 + AluJb SINE Alu 5 312 0 277 279 8 25 chr20 29209945 29210067 -42943815 + (TGAG)n Simple_repeat Simple_repeat 1 120 0 * 423 277 17 11 chr20 29209993 29210170 -42943712 + (TG)n Simple_repeat Simple_repeat 2 179 0 358 316 117 12 chr20 29211616 29211787 -42942095 + MIR SINE MIR 2 190 -72 27 29 0 0 chr20 29211810 29211844 -42942038 + AT_rich Low_complexity Low_complexity 1 34 0 233 299 0 0 chr20 29211951 29212018 -42941864 + MIR SINE MIR 106 172 -90 195 218 0 36 chr20 29212738 29212793 -42941089 - MIR SINE MIR -65 143 91 1729 187 42 6 chr20 29213341 29213673 -42940209 - MER2 DNA MER2_type 0 344 1 2316 103 0 7 chr20 29214066 29214368 -42939514 + AluSq SINE Alu 1 300 -13 2300 113 3 0 chr20 29215632 29215943 -42937939 + AluSx SINE Alu 1 312 0 1052 228 13 0 chr20 29215945 29216177 -42937705 + L1MD3 LINE L1 7746 7980 -15 294 266 109 23 chr20 29216218 29216346 -42937536 + MIR3 SINE MIR 7 145 -63 1564 124 4 13 chr20 29217127 29217361 -42936521 + AluJb SINE Alu 40 271 -41 561 244 26 0 chr20 29217583 29217720 -42936162 + L1MA10 LINE L1 5990 6293 -34 1886 149 16 7 chr20 29217720 29218029 -42935853 + AluJb SINE Alu 1 312 0 216 0 0 0 chr20 29218548 29218572 -42935310 + (T)n Simple_repeat Simple_repeat 1 24 0 552 240 201 10 chr20 29219364 29219677 -42934205 - L1M4 LINE L1 -806 5340 4968 480 259 0 0 chr20 29219676 29219811 -42934071 - L1M4 LINE L1 -2390 3756 3622 * 447 296 28 51 chr20 29220021 29220189 -42933693 - LTR33 LTR ERVL -309 212 49 2051 182 124 19 chr20 29220189 29220656 -42933226 - MLT2B1 LTR ERVL -4 516 1 447 296 28 51 chr20 29220656 29220703 -42933179 - LTR33 LTR ERVL -472 49 2 1946 211 21 10 chr20 29220843 29221232 -42932650 + MER82 DNA MER2_type 1 393 -260 759 154 17 0 chr20 29221244 29221361 -42932521 + FLAM_C SINE Alu 9 127 -16 279 213 53 13 chr20 29221363 29221438 -42932444 + MER82 DNA MER2_type 385 462 -191 1782 141 0 0 chr20 29221456 29221718 -42932164 + AluSx SINE Alu 44 305 -7 994 254 10 0 chr20 29221725 29221926 -42931956 + MER82 DNA MER2_type 451 653 0 23 0 0 0 chr20 29222524 29222547 -42931335 + AT_rich Low_complexity Low_complexity 1 23 0 1447 183 0 20 chr20 29222649 29222895 -42930987 + AluJo SINE Alu 1 241 -71 28 0 0 0 chr20 29222895 29222923 -42930959 + AT_rich Low_complexity Low_complexity 1 28 0 44239 28 21 1 chr20 29222984 29229016 -42924866 - L1HS LINE L1 0 6155 2 444 90 0 0 chr20 29229022 29229089 -42924793 + AluJo SINE Alu 245 311 -1 275 189 104 21 chr20 29229889 29230000 -42923882 + MLT1H LTR MaLR 14 175 -374 2440 157 19 19 chr20 29230444 29230843 -42923039 - MER34 LTR ERV1 -30 512 111 2411 70 37 0 chr20 29230843 29231141 -42922741 + AluY SINE Alu 1 309 -2 2440 157 19 19 chr20 29231141 29231156 -42922726 - MER34 LTR ERV1 -430 112 98 316 211 18 0 chr20 29231178 29231235 -42922647 - MER34 LTR ERV1 -419 123 66 1986 101 3 85 chr20 29231238 29231554 -42922328 - AluSx SINE Alu -14 298 9 780 212 7 0 chr20 29231632 29231778 -42922104 + MER3 DNA MER1_type 63 209 0 21 0 0 0 chr20 29234567 29234588 -42919294 + GC_rich Low_complexity Low_complexity 1 21 0 516 246 51 0 chr20 29235893 29236031 -42917851 + MIR SINE MIR 77 221 -41 2206 89 0 36 chr20 29236166 29236469 -42917413 - AluSg SINE Alu -18 292 1 2448 86 0 0 chr20 29237741 29238044 -42915838 + AluSx SINE Alu 1 303 -9 33 56 0 0 chr20 29238507 29238561 -42915321 + AT_rich Low_complexity Low_complexity 1 54 0 188 294 87 22 chr20 29238939 29239031 -42914851 + L2 LINE L2 3216 3313 0 1746 149 7 20 chr20 29239148 29239444 -42914438 - AluJo SINE Alu -19 293 2 2330 106 0 0 chr20 29239517 29239810 -42914072 - AluSg SINE Alu -16 294 2 440 235 39 33 chr20 29239864 29240017 -42913865 - HAL1 LINE L1 -105 2402 2249 30 45 0 0 chr20 29240160 29240204 -42913678 + AT_rich Low_complexity Low_complexity 1 44 0 877 318 160 28 chr20 29240555 29240773 -42913109 - L1M4 LINE L1 -2155 3991 3803 1834 180 3 0 chr20 29240773 29241084 -42912798 - AluJb SINE Alu 0 312 1 877 318 160 28 chr20 29241084 29241801 -42912081 - L1M4 LINE L1 -2343 3803 2932 733 142 8 24 chr20 29241984 29242111 -42911771 - FLAM_C SINE Alu -7 126 2 1924 114 23 0 chr20 29242123 29242385 -42911497 - AluSx SINE Alu -18 294 27 351 344 103 13 chr20 29242387 29242765 -42911117 - L1M4 LINE L1 -3435 2711 2300 251 218 3 3 chr20 29242818 29242877 -42911005 + MLT1I LTR MaLR 83 139 -270 524 301 61 27 chr20 29243670 29243966 -42909916 - HAL1b LINE L1 -824 524 219 1826 126 39 0 chr20 29244421 29244707 -42909175 - L1PA16 LINE L1 -1 6165 5869 928 170 6 0 chr20 29246218 29246389 -42907493 - L1MA6 LINE L1 -5 6295 6124 267 339 85 26 chr20 29248040 29248229 -42905653 + MIR SINE MIR 43 242 -20 1279 191 103 131 chr20 29248661 29248859 -42905023 - L1MB8 LINE L1 -10 6168 5966 1255 182 97 57 chr20 29248859 29249210 -42904672 - MLT1A1 LTR MaLR 0 365 1 1279 191 103 131 chr20 29249210 29249389 -42904493 - L1MB8 LINE L1 -212 5966 5784 2083 112 7 7 chr20 29249389 29249685 -42904197 - AluSx SINE Alu -16 296 1 1279 191 103 131 chr20 29249685 29249828 -42904054 - L1MB8 LINE L1 -394 5784 5639 1538 120 127 40 chr20 29249828 29250104 -42903778 - AluSx SINE Alu -12 300 1 1279 191 103 131 chr20 29250104 29250354 -42903528 - L1MB8 LINE L1 -539 5639 5417 426 340 38 10 chr20 29250434 29250670 -42903212 - MIR SINE MIR -1 261 23 260 318 65 24 chr20 29250980 29251150 -42902732 + L3 LINE CR1 1331 1507 -70 2325 102 0 0 chr20 29251509 29251804 -42902078 - AluSq SINE Alu -18 295 1 427 265 168 22 chr20 29251804 29251989 -42901893 + MIR SINE MIR 48 259 -3 1962 128 3 3 chr20 29253193 29253526 -42900356 - AluSx SINE Alu 0 333 1 927 53 76 38 chr20 29253714 29253846 -42900036 + MER85 DNA T2_type 2 138 -1 742 273 65 60 chr20 29253938 29254352 -42899530 + L2 LINE L2 2898 3313 0 1958 114 18 0 chr20 29254612 29254884 -42898998 - AluSg SINE Alu -33 277 1 1645 221 19 11 chr20 29255544 29255906 -42897976 - MLT1A1 LTR MaLR 0 365 1 196 211 19 39 chr20 29255974 29256026 -42897856 - MIR SINE MIR -189 73 23 1487 102 46 141 chr20 29256153 29256270 -42897612 + AluJo SINE Alu 23 150 -162 2182 108 0 14 chr20 29256270 29256566 -42897316 - AluSx SINE Alu -20 292 1 1487 102 46 141 chr20 29256566 29256753 -42897129 + AluJo SINE Alu 150 298 -14 601 286 124 8 chr20 29257194 29257435 -42896447 - MER46C DNA MER2_type -50 288 20 321 276 149 29 chr20 29258941 29259115 -42894767 + L1ME4a LINE L1 5869 6063 -58 1013 254 116 90 chr20 29260544 29261627 -42892255 + L2 LINE L2 2187 3313 0 812 116 7 43 chr20 29262302 29262440 -42891442 + FLAM_C SINE Alu 1 133 0 1440 193 4 14 chr20 29262465 29262740 -42891142 - AluJo SINE Alu -40 272 1 468 300 13 33 chr20 29262909 29263059 -42890823 + L2 LINE L2 3121 3267 -5 1259 208 78 11 chr20 29263285 29263569 -42890313 + MER58B DNA MER1_type 39 341 0 1945 97 22 7 chr20 29263787 29264092 -42889790 - AluSq SINE Alu 0 309 1 519 312 36 53 chr20 29264351 29264688 -42889194 - MLT1J1 LTR MaLR -101 345 15 3882 192 58 14 chr20 29265252 29266791 -42887091 - L1MB7 LINE L1 -16 6168 4563 2033 212 98 13 chr20 29266796 29266838 -42887044 - MLT2B1 LTR ERVL -8 512 475 288 91 0 0 chr20 29266838 29266882 -42887000 + (TG)n Simple_repeat Simple_repeat 2 45 0 2033 212 98 13 chr20 29266882 29267311 -42886571 - MLT2B1 LTR ERVL -45 475 1 2936 210 19 23 chr20 29267311 29268007 -42885875 - L1MB7 LINE L1 -1581 4565 3873 256 75 50 0 chr20 29268016 29268056 -42885826 - L1MDa LINE L1 -2228 4312 4271 * 720 166 20 7 chr20 29268041 29268192 -42885690 - L1MDa LINE L1 -2203 4337 4185 1468 247 20 14 chr20 29268204 29268548 -42885334 - MER77 LTR ERV1 -6 599 254 985 198 44 0 chr20 29268548 29268775 -42885107 - L1MDa LINE L1 -2367 4173 3937 976 215 119 31 chr20 29268779 29269333 -42884549 - L1MDa LINE L1 -2963 3577 2975 369 62 0 0 chr20 29269334 29269382 -42884500 + (TC)n Simple_repeat Simple_repeat 1 48 0 975 157 0 6 chr20 29269382 29269548 -42884334 - AluSx SINE Alu 0 312 148 657 163 0 0 chr20 29269548 29269646 -42884236 - AluSx SINE Alu -214 99 2 1446 190 79 20 chr20 29269649 29269981 -42883901 - L1MDa LINE L1 -3553 2987 2605 2003 137 3 0 chr20 29269981 29270287 -42883595 - AluSx SINE Alu -5 307 1 1446 190 79 20 chr20 29270287 29270473 -42883409 - L1MDa LINE L1 -3935 2605 2431 1360 154 36 24 chr20 29270473 29270720 -42883162 - AluJb SINE Alu 0 312 63 813 163 0 0 chr20 29270721 29270844 -42883038 - AluJb SINE Alu -188 124 2 6811 201 143 60 chr20 29270848 29270872 -42883010 - L1MDa LINE L1 -4135 2405 2384 1248 219 4 8 chr20 29270872 29271109 -42882773 + MER8 DNA MER2_type 1 236 -3 6811 201 143 60 chr20 29271109 29271601 -42882281 - L1MDa LINE L1 -4156 2384 1934 548 131 0 24 chr20 29271601 29271685 -42882197 - AluS SINE Alu -225 87 6 6811 201 143 60 chr20 29271685 29271945 -42881937 - L1MDa LINE L1 -4606 1934 1697 2072 124 0 7 chr20 29271945 29272252 -42881630 - AluSx SINE Alu -7 305 1 6811 201 143 60 chr20 29272252 29273612 -42880270 - L1MDa LINE L1 -4843 1697 1 728 153 34 17 chr20 29274112 29274230 -42879652 + 5S rRNA rRNA 1 120 -1 2081 118 0 7 chr20 29274300 29274604 -42879278 + AluSx SINE Alu 1 302 -10 2241 93 3 0 chr20 29276009 29276309 -42877573 + AluSc SINE Alu 1 301 -8 25 0 0 0 chr20 29276309 29276334 -42877548 + AT_rich Low_complexity Low_complexity 1 25 0 2132 105 0 0 chr20 29276383 29276700 -42877182 + AluSq SINE Alu 1 317 0 1551 171 0 42 chr20 29276787 29277096 -42876786 - AluJb SINE Alu -16 296 1 3206 135 38 0 chr20 29281473 29281948 -42871934 + MER1A DNA MER1_type 37 529 0 323 346 99 9 chr20 29287464 29287796 -42866086 - L1ME4a LINE L1 -176 5945 5584 288 154 0 0 chr20 29289799 29289851 -42864031 + CT-rich Low_complexity Low_complexity 1 52 0 224 200 117 0 chr20 29291365 29291425 -42862457 + MIR SINE MIR 74 140 -122 198 200 0 0 chr20 29291501 29291536 -42862346 - MIR SINE MIR -102 160 126 22 35 0 0 chr20 29293015 29293044 -42860838 + GC_rich Low_complexity Low_complexity 1 29 0 659 234 208 4 chr20 29293665 29293934 -42859948 + MER110A LTR ERV1 144 467 -1 3106 169 86 14 chr20 29293963 29294625 -42859257 + MER67C LTR ERV1 1 710 0 278 95 0 0 chr20 29294640 29294682 -42859200 + L2 LINE L2 3272 3313 0 1923 107 3 31 chr20 29294820 29294955 -42858927 + AluSx SINE Alu 1 138 -174 2033 129 0 0 chr20 29294955 29295249 -42858633 + AluSx SINE Alu 1 294 -18 1923 107 3 31 chr20 29295249 29295403 -42858479 + AluSx SINE Alu 138 282 -30 3381 175 41 37 chr20 29295489 29296219 -42857663 + MER49 LTR ERV1 184 916 -7 469 223 112 28 chr20 29296390 29296605 -42857277 + L1ME4a LINE L1 5683 5915 -206 185 0 40 0 chr20 29297561 29297586 -42856296 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 1515 81 0 0 chr20 29297586 29297784 -42856098 - AluSg/x SINE Alu -33 277 80 545 282 144 40 chr20 29298943 29299291 -42854591 - MLT1J LTR MaLR -4 507 124 187 186 23 23 chr20 29299851 29299894 -42853988 + MER5B DNA MER1_type 34 76 -102 888 128 0 8 chr20 29299907 29300040 -42853842 + AluSg/x SINE Alu 128 259 -53 441 0 0 0 chr20 29300067 29300116 -42853766 + (CA)n Simple_repeat Simple_repeat 1 49 0 271 250 66 13 chr20 29300129 29300205 -42853677 - MER5B DNA MER1_type -96 82 3 2044 110 7 0 chr20 29301497 29301787 -42852095 - AluSx SINE Alu -20 292 1 315 223 0 87 chr20 29301790 29301893 -42851989 - MER2 DNA MER2_type -251 94 1 333 302 22 36 chr20 29302815 29302831 -42851051 - MIR SINE MIR -27 235 220 1793 142 30 26 chr20 29302831 29303170 -42850712 + MER2 DNA MER2_type 1 340 -4 333 302 22 36 chr20 29303170 29303292 -42850590 - MIR SINE MIR -42 220 99 248 270 80 58 chr20 29305670 29305807 -42848075 - MIR SINE MIR -13 249 110 308 269 0 0 chr20 29305993 29306060 -42847822 + L2 LINE L2 3242 3308 -5 1463 201 26 27 chr20 29306173 29306612 -42847270 - LTR2B LTR ERV1 0 490 1 295 295 215 16 chr20 29306709 29306960 -42846922 + MLT1K LTR MaLR 225 525 -63 504 345 11 0 chr20 29307029 29307206 -42846676 + MIR SINE MIR 76 254 -8 223 202 3 0 chr20 29307811 29307857 -42846025 + MIR SINE MIR 108 155 -53 344 326 0 0 chr20 29308499 29308591 -42845291 + (CA)n Simple_repeat Simple_repeat 2 93 0 332 349 80 11 chr20 29308624 29308888 -42844994 + MLT1G1 LTR MaLR 1 282 -313 655 202 8 0 chr20 29308973 29309092 -42844790 + MLT1G1 LTR MaLR 461 580 -15 2214 105 17 3 chr20 29309253 29309549 -42844333 + AluSg SINE Alu 1 300 -10 316 211 189 0 chr20 29310194 29310289 -42843593 - LTR16C LTR ERVL 0 491 379 814 158 79 0 chr20 29310294 29310446 -42843436 - MLT1D LTR MaLR -339 166 3 261 139 0 0 chr20 29310904 29310947 -42842935 + (TA)n Simple_repeat Simple_repeat 2 44 0 745 99 0 0 chr20 29310956 29311057 -42842825 - HY3 scRNA scRNA 0 101 1 185 372 35 0 chr20 29312392 29312505 -42841377 + L2 LINE L2 2948 3064 -208 599 269 96 10 chr20 29312638 29312846 -42841036 + MIR SINE MIR 37 262 0 198 103 0 0 chr20 29312917 29312946 -42840936 + (CA)n Simple_repeat Simple_repeat 1 29 0 230 200 214 0 chr20 29313066 29313136 -42840746 + L2 LINE L2 3228 3312 -1 366 173 17 0 chr20 29313903 29313975 -42839907 - MER4B LTR ERV1 -9 655 527 323 102 20 0 chr20 29313975 29314024 -42839858 - MER4C LTR ERV1 -114 351 302 1142 143 122 13 chr20 29314148 29314378 -42839504 + MER4A LTR ERV1 1 255 -409 2351 107 34 11 chr20 29314399 29314754 -42839128 + Tigger1 DNA MER2_type 2055 2417 -1 1148 200 85 76 chr20 29314757 29315200 -42838682 - L1MC/D LINE L1 -649 5987 5537 6204 95 15 2 chr20 29315200 29317045 -42836837 - L1PA13 LINE L1 -8 6155 4291 1148 200 85 76 chr20 29317045 29317391 -42836491 - L1MC/D LINE L1 -1099 5537 5196 453 123 93 11 chr20 29317550 29317658 -42836224 - L1MEc LINE L1 -3918 2640 2504 2934 158 16 6 chr20 29318387 29318895 -42834987 - L1MB3 LINE L1 -2 6181 5669 348 207 9 78 chr20 29319525 29319641 -42834241 + L1MDa LINE L1 1857 1992 -4576 347 235 0 68 chr20 29319744 29319876 -42834006 + L1MDa LINE L1 3289 3411 -3129 3659 117 0 4 chr20 29320296 29320809 -42833073 + MER9 LTR ERVK 1 511 0 47515 65 10 1 chr20 29320809 29321514 -42832368 + HERVK9 LTR ERVK 1 698 -5218 687 134 17 25 chr20 29321514 29321633 -42832249 + L1PA8 LINE L1 6049 6166 -6 207 0 0 0 chr20 29321642 29321665 -42832217 + (TAAAA)n Simple_repeat Simple_repeat 3 25 0 47515 65 10 1 chr20 29321665 29326798 -42827084 + HERVK9 LTR ERVK 705 5907 -9 1890 159 24 0 chr20 29326898 29327193 -42826689 + AluSx SINE Alu 1 302 -10 346 231 19 39 chr20 29327220 29327324 -42826558 + L1MEc LINE L1 2156 2257 -4139 990 234 102 75 chr20 29327342 29327741 -42826141 + L1MEc LINE L1 2218 2605 -3610 181 0 0 65 chr20 29327741 29327772 -42826110 + (CAAAC)n Simple_repeat Simple_repeat 2 30 0 990 234 102 75 chr20 29327772 29327807 -42826075 + L1MEc LINE L1 2605 2638 -3577 2112 142 30 0 chr20 29327807 29328110 -42825772 + AluSx SINE Alu 1 312 0 990 234 102 75 chr20 29328110 29328450 -42825432 + L1MEc LINE L1 2638 3014 -3201 326 267 17 33 chr20 29329710 29329890 -42823992 + (TG)n Simple_repeat Simple_repeat 2 178 0 374 225 37 9 chr20 29329939 29330269 -42823613 + (TG)n Simple_repeat Simple_repeat 1 339 0 451 329 64 7 chr20 29330578 29330873 -42823009 - L1ME3A LINE L1 -93 6077 5766 7811 17 1 0 chr20 29331131 29332010 -42821872 - L1PA3 LINE L1 -2 6153 5274 697 141 7 7 chr20 29333490 29333632 -42820250 + (TCCA)n Simple_repeat Simple_repeat 1 142 0 297 163 125 0 chr20 29336050 29336130 -42817752 + MER5C DNA MER1_type 233 322 -2 831 190 92 31 chr20 29336538 29336733 -42817149 - MLT1E1 LTR MaLR 0 654 448 683 268 16 0 chr20 29336733 29336916 -42816966 - L1ME3A LINE L1 -1308 4838 4653 1018 244 26 19 chr20 29336971 29337237 -42816645 - MLT1E1 LTR MaLR -386 268 1 1902 174 34 92 chr20 29338062 29338307 -42815575 + MLT1D LTR MaLR 58 263 -242 2370 189 36 40 chr20 29338307 29338827 -42815055 - MLT2B1 LTR ERVL 0 520 3 1902 174 34 92 chr20 29338827 29339057 -42814825 + MLT1D LTR MaLR 263 505 0 6398 99 8 3 chr20 29339131 29341055 -42812827 - L1PA14 LINE L1 -3 6158 4233 2503 166 34 4 chr20 29341055 29341520 -42812362 + L1MA9 LINE L1 5828 6310 -2 195 162 0 0 chr20 29341836 29341873 -42812009 + (TG)n Simple_repeat Simple_repeat 1 37 0 342 269 170 7 chr20 29342388 29342529 -42811353 + MER5A DNA MER1_type 10 173 -16 490 245 92 18 chr20 29342552 29342715 -42811167 - MER5B DNA MER1_type 0 178 4 261 305 72 40 chr20 29342744 29342967 -42810915 + L1MB2 LINE L1 5576 5805 -2003 319 58 0 159 chr20 29343322 29343391 -42810491 - MLT2A1 LTR ERVL 0 453 396 620 38 71 28 chr20 29343414 29343630 -42810252 + (TA)n Simple_repeat Simple_repeat 1 225 0 521 87 74 0 chr20 29343648 29343882 -42810000 + (TA)n Simple_repeat Simple_repeat 1 251 0 2925 82 22 12 chr20 29343882 29344283 -42809599 - MLT2A1 LTR ERVL -39 405 1 195 195 0 0 chr20 29345465 29345506 -42808376 - MIR SINE MIR -44 218 178 240 236 38 85 chr20 29345717 29345823 -42808059 - L2 LINE L2 -9 3304 3204 277 254 15 100 chr20 29346832 29346962 -42806920 - L2 LINE L2 0 3272 3154 501 262 146 6 chr20 29347179 29347315 -42806567 - MER5A DNA MER1_type -2 187 23 186 43 0 0 chr20 29347315 29347338 -42806544 + (CTG)n Simple_repeat Simple_repeat 1 23 0 501 262 146 6 chr20 29347338 29347365 -42806517 - MER5A DNA MER1_type -166 23 1 204 125 0 0 chr20 29348010 29348042 -42805840 + (TCCA)n Simple_repeat Simple_repeat 4 35 0 3977 127 35 9 chr20 29348194 29348831 -42805051 - L1PA15 LINE L1 -17 6148 5496 210 71 0 0 chr20 29349136 29349164 -42804718 + (T)n Simple_repeat Simple_repeat 1 28 0 7526 104 4 19 chr20 29349609 29350682 -42803200 - MER11C LTR ERVK -14 1057 1 2014 139 83 3 chr20 29350912 29351249 -42802633 - THE1B LTR MaLR 0 364 1 336 127 0 0 chr20 29351349 29351404 -42802478 + (TG)n Simple_repeat Simple_repeat 2 56 0 202 143 29 0 chr20 29351404 29351439 -42802443 + GA-rich Low_complexity Low_complexity 2 37 0 692 172 119 0 chr20 29351524 29351675 -42802207 + L1MB2 LINE L1 6001 6169 -2 30 0 0 0 chr20 29352614 29352644 -42801238 + AT_rich Low_complexity Low_complexity 1 30 0 1045 193 83 90 chr20 29353199 29353634 -42800248 - MSTB1 LTR MaLR 0 432 1 683 256 90 72 chr20 29354268 29354713 -42799169 + LTR37B LTR ERV1 6 458 -10 2696 177 62 10 chr20 29355716 29356235 -42797647 + LTR64 LTR ERVK 1 546 -12 355 252 305 9 chr20 29357084 29357425 -42796457 - L2 LINE L2 -1111 2203 1762 1255 223 46 64 chr20 29357425 29357878 -42796004 + LTR56 LTR ERV1 1 445 0 2438 91 0 0 chr20 29358508 29358815 -42795067 - AluY SINE Alu -4 307 1 431 250 176 0 chr20 29359097 29359245 -42794637 + MER5A DNA MER1_type 16 189 0 21 36 0 0 chr20 29360010 29360038 -42793844 + AT_rich Low_complexity Low_complexity 1 28 0 268 219 14 14 chr20 29360579 29360652 -42793230 + (TA)n Simple_repeat Simple_repeat 2 74 0 523 273 123 55 chr20 29360711 29360959 -42792923 + LTR33 LTR ERVL 58 348 -173 1183 224 89 63 chr20 29360959 29361451 -42792431 + MLT1D LTR MaLR 1 505 0 523 273 123 55 chr20 29361451 29361624 -42792258 + LTR33 LTR ERVL 348 508 -13 267 54 0 0 chr20 29364398 29364435 -42789447 + (CAAT)n Simple_repeat Simple_repeat 2 38 0 536 198 11 82 chr20 29364939 29365121 -42788761 - MLT1D LTR MaLR -229 276 108 303 287 0 21 chr20 29365484 29365578 -42788304 + L1M4 LINE L1 4114 4205 -1941 1838 188 20 0 chr20 29366440 29366781 -42787101 + MER7A DNA MER2_type 1 346 0 338 143 16 0 chr20 29366870 29366933 -42786949 + CT-rich Low_complexity Low_complexity 1 64 0 889 129 0 14 chr20 29367616 29367755 -42786127 + LTR7 LTR ERV1 1 137 -313 889 141 13 19 chr20 29368013 29368169 -42785713 + LTR7 LTR ERV1 296 450 0 775 167 0 0 chr20 29369056 29369176 -42784706 + FLAM_C SINE Alu 2 121 -22 303 28 0 0 chr20 29369176 29369212 -42784670 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 448 256 94 70 chr20 29369216 29369666 -42784216 - L1MC/D LINE L1 -2053 5755 5291 1867 86 89 0 chr20 29369666 29369935 -42783947 + AluSp SINE Alu 2 294 -19 448 256 94 70 chr20 29369935 29369973 -42783909 - L1MC/D LINE L1 -2517 5291 5255 3036 210 23 30 chr20 29370008 29370745 -42783137 + L1MB8 LINE L1 5447 6178 0 202 289 87 19 chr20 29373608 29373712 -42780170 + MIR SINE MIR 103 213 -49 1153 173 62 159 chr20 29373713 29374083 -42779799 - MER21B LTR ERV1 -528 335 2 5333 130 39 16 chr20 29374525 29374836 -42779046 - MER4D LTR ERV1 0 903 601 1801 134 7 14 chr20 29374836 29375149 -42778733 + AluSp SINE Alu 1 311 0 5333 130 39 16 chr20 29375149 29375719 -42778163 - MER4D LTR ERV1 -302 601 1 1096 272 149 57 chr20 29376067 29376582 -42777300 + L1MC4 LINE L1 7095 7682 -360 2992 208 23 54 chr20 29376582 29377327 -42776555 - MER72 LTR ERV1 0 722 1 1096 272 149 57 chr20 29377327 29377457 -42776425 + L1MC4 LINE L1 7682 7799 -243 349 167 45 0 chr20 29378524 29378590 -42775292 + MER58B DNA MER1_type 256 324 -17 984 176 21 34 chr20 29378633 29378872 -42775010 - L1MA9 LINE L1 -6 6306 6071 514 231 29 26 chr20 29379026 29379159 -42774723 - MIR SINE MIR -35 173 43 1370 158 61 65 chr20 29379159 29379469 -42774413 + AluJo SINE Alu 1 309 -3 514 231 29 26 chr20 29379469 29379502 -42774380 - MIR SINE MIR -165 43 12 1988 107 0 49 chr20 29379746 29380072 -42773810 - AluY SINE Alu -1 310 1 973 226 24 9 chr20 29380129 29380341 -42773541 + MER20 DNA MER1_type 1 215 -4 268 284 191 43 chr20 29380638 29380755 -42773127 - L1MC/D LINE L1 -2008 5800 5702 2007 190 72 71 chr20 29380755 29381307 -42772575 + MLT2B3 LTR ERVL 1 553 -1 268 284 191 43 chr20 29381307 29381492 -42772390 - L1MC/D LINE L1 -2106 5702 5453 460 302 43 62 chr20 29381578 29381677 -42772205 - L1MC/D LINE L1 -811 5335 5236 3229 76 20 20 chr20 29381677 29382125 -42771757 - LTR7 LTR ERV1 -2 448 1 460 302 43 62 chr20 29382125 29382283 -42771599 - L1MC/D LINE L1 -910 5236 5083 1885 151 98 64 chr20 29382324 29382761 -42771121 - LTR10A LTR ERV1 -61 548 97 378 296 7 7 chr20 29383385 29383520 -42770362 - L1ME3 LINE L1 -213 5949 5815 1058 234 29 4 chr20 29383558 29383831 -42770051 - L1MA9 LINE L1 -38 6274 5995 423 141 0 39 chr20 29383848 29383926 -42769956 + L1MA9 LINE L1 5867 5941 -371 399 321 15 0 chr20 29383932 29384063 -42769819 - L1ME3 LINE L1 -342 5828 5696 14340 137 22 33 chr20 29384065 29386508 -42767374 - Tigger1 DNA MER2_type 0 2418 1 241 147 0 0 chr20 29386535 29386569 -42767313 - L1M3 LINE L1 -530 5653 5620 489 192 182 49 chr20 29386585 29386795 -42767087 - MLT1E1 LTR MaLR -361 293 1 23 0 0 0 chr20 29386835 29386858 -42767024 + AT_rich Low_complexity Low_complexity 1 23 0 3717 195 159 20 chr20 29387821 29388839 -42765043 - MER52A LTR ERV1 0 1278 1 204 184 0 0 chr20 29388845 29388894 -42764988 + (CA)n Simple_repeat Simple_repeat 2 50 0 260 288 0 14 chr20 29388963 29389036 -42764846 - MLT1G LTR MaLR -195 395 324 579 257 9 0 chr20 29389093 29389206 -42764676 + MER81 DNA DNA 1 114 0 253 213 288 0 chr20 29389208 29389288 -42764594 - MLT1G LTR MaLR -317 273 171 3452 118 14 10 chr20 29389502 29390012 -42763870 - MER41E LTR ERV1 0 512 1 24 53 0 0 chr20 29390359 29390397 -42763485 + AT_rich Low_complexity Low_complexity 1 38 0 2124 120 0 0 chr20 29390866 29391165 -42762717 + AluSx SINE Alu 1 299 -13 318 320 7 65 chr20 29391265 29391418 -42762464 - L1MC4 LINE L1 -1 8041 7898 3132 201 82 36 chr20 29391420 29392215 -42761667 - L1MA9 LINE L1 -30 6282 5452 327 308 56 0 chr20 29392503 29392610 -42761272 - LTR33 LTR ERVL -332 189 77 227 303 30 0 chr20 29392623 29392689 -42761193 - LTR33 LTR ERVL -378 143 76 * 256 246 31 0 chr20 29392663 29392728 -42761154 - LTR33 LTR ERVL -379 142 76 231 250 47 0 chr20 29392779 29392843 -42761039 - LTR33 LTR ERVL -379 142 76 252 170 0 0 chr20 29392952 29392999 -42760883 - LTR33 LTR ERVL -399 122 76 414 304 36 0 chr20 29393011 29393149 -42760733 - LTR33 LTR ERVL -378 143 1 231 262 208 50 chr20 29393149 29393351 -42760531 - L2 LINE L2 -655 2659 2426 21 36 0 0 chr20 29393591 29393619 -42760263 + AT_rich Low_complexity Low_complexity 1 28 0 794 322 110 20 chr20 29393636 29394127 -42759755 - L1ME4a LINE L1 -30 6091 5557 201 237 0 0 chr20 29395696 29395755 -42758127 + (TG)n Simple_repeat Simple_repeat 1 59 0 1066 269 168 27 chr20 29395767 29396242 -42757640 - MLT1F LTR MaLR 0 542 1 757 291 165 6 chr20 29396507 29396858 -42757024 + LTR16C LTR ERVL 79 485 -6 1578 212 9 12 chr20 29396948 29397287 -42756595 - MER4D LTR ERV1 -2 901 564 762 179 13 19 chr20 29397290 29397467 -42756415 - MER4E LTR ERV1 -588 284 1 1008 177 172 35 chr20 29398238 29398436 -42755446 + MSTD LTR MaLR 141 396 0 547 215 164 18 chr20 29400060 29400279 -42753603 - LTR16C LTR ERVL -9 482 232 690 291 9 26 chr20 29400340 29400567 -42753315 + MER58A DNA MER1_type 2 224 0 228 172 0 0 chr20 29403311 29403369 -42750513 + CT-rich Low_complexity Low_complexity 2 59 0 251 315 33 0 chr20 29404369 29404461 -42749421 - LTR16C LTR ERVL -18 473 379 414 138 64 11 chr20 29406430 29406524 -42747358 - L1MB2 LINE L1 -3 6168 6070 1664 161 0 22 chr20 29407100 29407411 -42746471 + AluJo SINE Alu 1 304 -8 4198 123 55 20 chr20 29407445 29408158 -42745724 - L1PA16 LINE L1 0 6166 5429 * 10778 186 7 8 chr20 29408154 29411026 -42742856 - L1PA15 LINE L1 -2 6163 3281 5144 227 34 5 chr20 29410554 29412190 -42741692 - L1 LINE L1 -2393 3753 1998 4360 257 104 31 chr20 29412177 29413251 -42740631 - L1 LINE L1 -3052 4054 3060 * 2594 74 0 0 chr20 29413251 29413560 -42740322 - AluY SINE Alu -2 309 1 4360 257 104 31 chr20 29413560 29413772 -42740110 - L1 LINE L1 -4046 3060 2865 1947 152 39 36 chr20 29413772 29414108 -42739774 + MER1B DNA MER1_type 1 337 0 4360 257 104 31 chr20 29414108 29414300 -42739582 - L1 LINE L1 -4241 2865 2689 1191 112 0 0 chr20 29414300 29414479 -42739403 + (TTCC)n Simple_repeat Simple_repeat 2 180 0 4360 257 104 31 chr20 29414479 29414511 -42739371 - L1 LINE L1 -4417 2689 2661 1821 121 67 20 chr20 29414511 29414809 -42739073 - AluSq SINE Alu -1 312 1 4360 257 104 31 chr20 29414809 29417297 -42736585 - L1 LINE L1 -4445 2661 1 229 100 80 60 chr20 29418794 29418844 -42735038 - LTR35 LTR ERV1 -41 577 527 2030 123 0 14 chr20 29419975 29420283 -42733599 + AluSg SINE Alu 1 304 0 2265 107 3 3 chr20 29420599 29420899 -42732983 + AluSg SINE Alu 1 300 -10 1945 120 20 20 chr20 29423383 29423682 -42730200 - AluSx SINE Alu -13 299 1 468 290 30 0 chr20 29424122 29424253 -42729629 + L1M4 LINE L1 655 789 -5753 742 237 22 13 chr20 29424302 29424526 -42729356 + L1M4 LINE L1 883 1108 -5434 * 11960 201 35 36 chr20 29424525 29427379 -42726503 - L1 LINE L1 -963 6602 3745 2448 100 0 0 chr20 29427379 29427689 -42726193 - AluY SINE Alu -1 310 1 11960 201 35 36 chr20 29427689 29428863 -42725019 - L1 LINE L1 -3820 3745 2572 13419 192 59 66 chr20 29428873 29433746 -42720136 - L1PB1 LINE L1 -3 6864 2054 3138 130 2 4 chr20 29433746 29434229 -42719653 - L1PB1 LINE L1 -8 6143 5662 13419 192 59 66 chr20 29434229 29436263 -42717619 - L1PB1 LINE L1 -4813 2054 6 1912 109 0 0 chr20 29436358 29436623 -42717259 - L1PA8 LINE L1 0 6172 5908 695 209 16 16 chr20 29436635 29436817 -42717065 - L1M4 LINE L1 -846 5300 5119 248 315 63 0 chr20 29438133 29438276 -42715606 - MER112 DNA MER1_type -99 161 10 740 282 13 26 chr20 29440470 29440697 -42713185 - MER58A DNA MER1_type 0 224 1 594 239 115 21 chr20 29440904 29441147 -42712735 + LTR16C LTR ERVL 225 490 -1 43947 29 25 1 chr20 29442680 29448683 -42705199 + L1PA2 LINE L1 8 6155 0 340 263 114 70 chr20 29448986 29449214 -42704668 - MER57A LTR ERV1 0 403 166 486 277 58 29 chr20 29449232 29449438 -42704444 - MER93a LTR ERV1 -190 212 1 1491 329 45 30 chr20 29449442 29450309 -42703573 - MER31-int LTR ERV1 -425 7112 6233 1077 248 62 99 chr20 29450724 29451746 -42702136 - MER31-int LTR ERV1 -780 6199 2143 525 259 35 15 chr20 29451736 29451937 -42701945 - MER31-int LTR ERV1 -1987 2949 2745 * 201 171 0 0 chr20 29451937 29451972 -42701910 + A-rich Low_complexity Low_complexity 1 35 0 910 254 74 74 chr20 29451973 29452737 -42701145 - MER31-int LTR ERV1 -1698 3182 2371 420 274 19 17 chr20 29453273 29453479 -42700403 - MER57A LTR ERV1 0 403 198 446 271 26 13 chr20 29453530 29453685 -42700197 - MER5A DNA MER1_type -11 178 22 467 301 85 20 chr20 29453688 29453887 -42699995 - MER93a LTR ERV1 -190 212 1 241 279 27 18 chr20 29454372 29454483 -42699399 + MER5A DNA MER1_type 10 121 -68 746 260 32 9 chr20 29454964 29455183 -42698699 + MER58A DNA MER1_type 1 224 0 183 250 21 0 chr20 29457810 29457858 -42696024 - L2 LINE L2 -502 2812 2764 477 115 0 0 chr20 29458530 29458617 -42695265 + (TC)n Simple_repeat Simple_repeat 2 88 0 458 292 24 12 chr20 29460314 29460482 -42693400 - MER5A DNA MER1_type -11 178 9 566 152 0 11 chr20 29462870 29462962 -42690920 - AluJo SINE Alu -178 134 44 245 160 20 0 chr20 29463007 29463057 -42690825 - MLT1J LTR MaLR -38 473 423 181 250 141 0 chr20 29463080 29463144 -42690738 - MIR SINE MIR -14 248 176 866 157 0 8 chr20 29463653 29463787 -42690095 - FLAM_C SINE Alu 0 133 1 328 308 113 32 chr20 29463787 29464000 -42689882 - L1M4 LINE L1 -956 5190 4957 301 392 38 12 chr20 29464774 29465014 -42688868 + MIR SINE MIR 13 258 -4 27 29 0 0 chr20 29466626 29466660 -42687222 + AT_rich Low_complexity Low_complexity 1 34 0 252 86 0 0 chr20 29467138 29467173 -42686709 + (CA)n Simple_repeat Simple_repeat 1 35 0 291 306 67 60 chr20 29467477 29467611 -42686271 - MER5B DNA MER1_type 0 178 44 3146 142 45 7 chr20 29468151 29468708 -42685174 - L1MB3 LINE L1 -11 6172 5595 36115 90 12 11 chr20 29468709 29474839 -42679043 - L1PA6 LINE L1 -8 6146 10 1442 196 78 17 chr20 29474847 29475255 -42678627 - L1MB3 LINE L1 -569 5614 5182 647 117 29 0 chr20 29475286 29475389 -42678493 + MSTA LTR MaLR 1 106 -322 4829 85 29 13 chr20 29475401 29476086 -42677796 - L1PA10 LINE L1 -2 6166 5471 285 324 48 21 chr20 29476218 29476363 -42677519 + MLT1J LTR MaLR 31 179 -332 1507 203 83 3 chr20 29476625 29476965 -42676917 + MLT2C1 LTR ERVL 1 480 -40 236 133 0 0 chr20 29476946 29476991 -42676891 - LTR66 LTR ERVL -172 438 394 * 185 204 31 10 chr20 29477008 29477106 -42676776 + (TA)n Simple_repeat Simple_repeat 2 101 0 276 123 0 173 chr20 29477117 29477198 -42676684 + MLT2B2 LTR ERVL 454 515 0 1997 148 43 32 chr20 29477198 29477569 -42676313 - THE1C LTR MaLR 0 375 1 1435 143 4 8 chr20 29477771 29478030 -42675852 + L1MA4A LINE L1 5866 6123 -180 467 183 0 11 chr20 29478033 29478126 -42675756 + L1MA4A LINE L1 6189 6280 -23 1030 53 26 0 chr20 29478155 29478307 -42675575 + (GAAA)n Simple_repeat Simple_repeat 3 158 0 562 263 104 15 chr20 29478658 29478917 -42674965 - LTR43 LTR ERV1 -124 478 197 325 263 12 0 chr20 29479719 29479799 -42674083 - LTR64 LTR ERVK -477 81 1 688 200 30 0 chr20 29479799 29479934 -42673948 - MER5A DNA MER1_type -43 146 8 2933 200 61 39 chr20 29480385 29481262 -42672620 - L1MB8 LINE L1 0 6178 5282 475 188 62 12 chr20 29481313 29481473 -42672409 - L1MB8 LINE L1 -825 5321 5154 825 188 50 12 chr20 29482097 29482257 -42671625 - FRAM SINE Alu -11 165 1 344 293 77 75 chr20 29482266 29482642 -42671240 - MLT1K LTR MaLR -172 416 40 223 283 151 26 chr20 29483487 29483639 -42670243 - MER5B DNA MER1_type 0 178 8 1078 171 182 4 chr20 29484673 29484997 -42668885 + LTR47A LTR ERVL 17 452 0 398 346 6 0 chr20 29488352 29488531 -42665351 + (CA)n Simple_repeat Simple_repeat 1 180 0 225 0 0 0 chr20 29488554 29488579 -42665303 + (CA)n Simple_repeat Simple_repeat 1 25 0 219 335 18 49 chr20 29489340 29489504 -42664378 + MIR3 SINE MIR 17 175 -33 572 278 56 56 chr20 29490231 29490555 -42663327 + L1MC4 LINE L1 7719 8042 0 310 305 36 18 chr20 29491374 29491541 -42662341 + (CCCCG)n Simple_repeat Simple_repeat 3 172 0 370 174 12 43 chr20 29491553 29491714 -42662168 + C-rich Low_complexity Low_complexity 3 158 0 223 326 6 34 chr20 29491727 29491905 -42661977 + C-rich Low_complexity Low_complexity 5 177 0 * 251 299 23 40 chr20 29491876 29492050 -42661832 + CT-rich Low_complexity Low_complexity 1 171 0 * 394 318 6 17 chr20 29491935 29492114 -42661768 + C-rich Low_complexity Low_complexity 1 177 0 989 235 76 17 chr20 29492555 29492857 -42661025 - MER33 DNA MER1_type -4 320 1 241 248 161 13 chr20 29492987 29493136 -42660746 - L2 LINE L2 -296 3017 2847 394 272 145 61 chr20 29493351 29493579 -42660303 - L1ME2 LINE L1 -11 6153 5907 924 213 25 33 chr20 29496088 29496332 -42657550 + MER31B LTR ERV1 225 466 0 327 299 17 82 chr20 29496518 29496749 -42657133 - L1MC4 LINE L1 -1 8041 7826 720 273 73 26 chr20 29496793 29497110 -42656772 - L1ME2 LINE L1 -16 6148 5817 424 336 0 0 chr20 29497520 29497654 -42656228 + (TG)n Simple_repeat Simple_repeat 1 134 0 324 280 117 43 chr20 29497656 29497981 -42655901 - L1ME4a LINE L1 -153 5968 5620 824 295 147 22 chr20 29498507 29499012 -42654870 + L2 LINE L2 2177 2744 -570 413 189 142 9 chr20 29499015 29499121 -42654761 + MER3 DNA MER1_type 76 195 -14 535 251 210 6 chr20 29499136 29499370 -42654512 + L2 LINE L2 2743 3034 -279 525 170 36 0 chr20 29499830 29499942 -42653940 - L1MCa LINE L1 -4481 1945 1830 1841 184 3 13 chr20 29500192 29500496 -42653386 - AluJb SINE Alu -11 301 1 1106 276 3 15 chr20 29500547 29500886 -42652996 + MLT2C1 LTR ERVL 4 338 -59 4218 127 7 25 chr20 29500886 29501288 -42652594 - Tigger1 DNA MER2_type -1 2417 2031 2188 99 0 59 chr20 29501288 29501612 -42652270 + AluSx SINE Alu 1 305 -7 4218 127 7 25 chr20 29501612 29501904 -42651978 - Tigger1 DNA MER2_type -387 2031 1735 2480 116 26 3 chr20 29502019 29502408 -42651474 - L1PB3 LINE L1 -47 6107 5710 9938 134 29 24 chr20 29502408 29503474 -42650408 - Tigger1 DNA MER2_type -675 1743 683 1860 171 14 3 chr20 29503474 29503761 -42650121 - AluJo SINE Alu -22 290 1 9938 134 29 24 chr20 29503761 29504026 -42649856 - Tigger1 DNA MER2_type -1735 683 421 2158 137 3 10 chr20 29504026 29504340 -42649542 - AluSx SINE Alu 0 312 1 9938 134 29 24 chr20 29504340 29504718 -42649164 - Tigger1 DNA MER2_type -1997 421 25 312 207 11 103 chr20 29504872 29504959 -42648923 - L1MCa LINE L1 -4342 2084 2006 1218 249 52 75 chr20 29504964 29505037 -42648845 - L1MC4 LINE L1 -156 7886 7813 2194 101 0 41 chr20 29505037 29505355 -42648527 + AluSq SINE Alu 6 310 -3 1218 249 52 75 chr20 29505355 29505976 -42647906 - L1MC4 LINE L1 -229 7813 7208 1497 126 45 14 chr20 29506563 29506786 -42647096 - AluSx SINE Alu -24 288 59 251 291 126 20 chr20 29506981 29507132 -42646750 - MER5B DNA MER1_type -1 177 11 215 283 200 22 chr20 29508040 29508220 -42645662 - MIR SINE MIR -3 259 48 429 147 74 0 chr20 29509827 29509922 -42643960 - MER5A DNA MER1_type -79 110 9 900 151 4 0 chr20 29511928 29512025 -42641857 + (CA)n Simple_repeat Simple_repeat 1 96 -767 4986 81 11 12 chr20 29512025 29512692 -42641190 - PABL_B LTR ERV1 -1 666 1 900 151 4 0 chr20 29512692 29512788 -42641094 + (CA)n Simple_repeat Simple_repeat 96 863 0 2418 134 61 30 chr20 29512788 29513300 -42640582 - MLT2A2 LTR ERVL 0 554 1 822 200 0 0 chr20 29513300 29513622 -42640260 + (CA)n Simple_repeat Simple_repeat 1 322 0 2112 160 77 3 chr20 29514107 29514495 -42639387 - LTR23 LTR ERV1 -10 427 11 607 172 147 0 chr20 29514985 29515142 -42638740 - LTR54 LTR ERV1 0 510 331 1599 184 0 3 chr20 29515232 29515520 -42638362 - AluJb SINE Alu -18 294 8 193 369 10 19 chr20 29516289 29516392 -42637490 + MIR3 SINE MIR 106 207 -1 22 0 0 0 chr20 29516943 29516965 -42636917 + AT_rich Low_complexity Low_complexity 1 22 0 775 174 26 118 chr20 29516975 29517245 -42636637 + L1MC4 LINE L1 6914 7158 -884 3157 268 117 35 chr20 29517278 29518507 -42635375 - L1MD3 LINE L1 -6 8036 6676 801 230 95 0 chr20 29518507 29518707 -42635175 + MER20 DNA MER1_type 1 219 0 3157 268 117 35 chr20 29518707 29518950 -42634932 - L1MD3 LINE L1 -1366 6676 6454 183 239 239 22 chr20 29519816 29519908 -42633974 + L2 LINE L2 3202 3313 0 217 366 18 9 chr20 29520682 29520794 -42633088 - L2 LINE L2 -252 3061 2949 531 332 64 31 chr20 29520843 29521328 -42632554 - L2 LINE L2 -443 2871 2371 211 275 6 18 chr20 29522705 29522876 -42631006 + (CACCAT)n Simple_repeat Simple_repeat 5 173 0 728 193 18 0 chr20 29522896 29523067 -42630815 + (CACCAT)n Simple_repeat Simple_repeat 1 174 0 440 260 6 0 chr20 29523085 29523258 -42630624 + (CAT)n Simple_repeat Simple_repeat 1 174 0 380 248 0 14 chr20 29523293 29523438 -42630444 + (CACCAT)n Simple_repeat Simple_repeat 1 143 0 212 197 0 28 chr20 29523459 29523530 -42630352 + (CACCAT)n Simple_repeat Simple_repeat 4 72 0 193 356 0 22 chr20 29524202 29524292 -42629590 + L2 LINE L2 3099 3186 -86 640 222 62 12 chr20 29524384 29524546 -42629336 - MIR SINE MIR -59 203 34 628 277 48 19 chr20 29524835 29525041 -42628841 - LTR16C LTR ERVL 0 491 280 204 357 135 11 chr20 29525211 29525396 -42628486 + L2 LINE L2 3044 3251 -21 240 35 0 0 chr20 29525920 29525949 -42627933 + (TA)n Simple_repeat Simple_repeat 1 29 0 1856 124 10 28 chr20 29525949 29526239 -42627643 - AluSx SINE Alu -17 295 11 717 279 113 40 chr20 29526428 29526808 -42627074 + MLT1I LTR MaLR 1 408 -1 454 249 46 55 chr20 29527512 29527749 -42626133 - LTR56 LTR ERV1 -21 424 190 21 0 0 0 chr20 29527749 29527770 -42626112 + AT_rich Low_complexity Low_complexity 1 21 0 3164 171 23 13 chr20 29527775 29528389 -42625493 - L1PB4 LINE L1 -1 6858 6239 1527 185 0 20 chr20 29528391 29528694 -42625188 - AluJo SINE Alu -15 297 1 11311 224 27 11 chr20 29528695 29531767 -42622115 - L1PB4 LINE L1 -667 6192 3075 4047 274 29 73 chr20 29531763 29533946 -42619936 - L1PB4 LINE L1 -4586 2263 616 * 2651 250 32 44 chr20 29533989 29534673 -42619209 - L1P LINE L1 -3325 2821 2152 1995 114 0 4 chr20 29534673 29534977 -42618905 - AluSg SINE Alu 0 303 1 2651 250 32 44 chr20 29534977 29535304 -42618578 - L1P LINE L1 -3994 2152 1822 308 308 8 17 chr20 29535304 29535424 -42618458 + MER69 DNA AcHobo 593 711 -1815 615 300 106 26 chr20 29535461 29535811 -42618071 + MER69 DNA AcHobo 697 1074 -1452 * 686 193 41 150 chr20 29535806 29536246 -42617636 + MER69 DNA AcHobo 1938 2329 -197 1502 240 166 17 chr20 29536269 29536848 -42617034 + LTR65 LTR ERV1 3 667 -2 730 272 0 0 chr20 29536850 29537045 -42616837 + MER69 DNA AcHobo 2323 2517 -9 342 0 0 0 chr20 29538447 29538485 -42615397 + (CA)n Simple_repeat Simple_repeat 2 39 0 403 363 0 0 chr20 29540194 29540373 -42613509 + (CA)n Simple_repeat Simple_repeat 1 179 0 335 303 146 19 chr20 29541780 29542041 -42611841 + L1MC4 LINE L1 7482 7775 -267 316 267 12 56 chr20 29542456 29542617 -42611265 + C-rich Low_complexity Low_complexity 6 159 0 823 220 65 45 chr20 29543072 29543381 -42610501 - MER33 DNA MER1_type -4 320 6 246 225 90 27 chr20 29543536 29543647 -42610235 - L2 LINE L2 -344 2970 2853 413 296 69 36 chr20 29543863 29544140 -42609742 - L1ME3 LINE L1 -4 6158 5873 198 0 0 0 chr20 29545072 29545094 -42608788 + (T)n Simple_repeat Simple_repeat 1 22 0 506 271 16 8 chr20 29545542 29545664 -42608218 + FLAM_A SINE Alu 1 123 -19 1110 175 13 94 chr20 29547002 29547310 -42606572 + MER31B LTR ERV1 6 288 -178 3044 100 31 2 chr20 29547310 29547731 -42606151 - HERVK LTR ERVK -6810 433 1 5285 153 20 19 chr20 29547731 29548699 -42605183 - LTR5 LTR ERVK 0 969 1 11089 67 1 39 chr20 29548701 29550278 -42603604 + L1P LINE L1 2849 4365 -1781 1578 108 0 0 chr20 29550278 29550499 -42603383 + L1PA6 LINE L1 5932 6154 0 181 360 56 22 chr20 29552166 29552255 -42601627 + L2 LINE L2 390 481 -2833 1148 248 42 39 chr20 29552338 29553474 -42600408 - L1MC4 LINE L1 -1 8041 6837 632 216 36 0 chr20 29553562 29553701 -42600181 + MER20 DNA MER1_type 1 144 -75 12982 183 126 5 chr20 29553701 29556233 -42597649 + L1PA15-16 LINE L1 1 2837 -4012 189 329 13 0 chr20 29556233 29556309 -42597573 - MIR SINE MIR -79 183 107 627 284 40 99 chr20 29556364 29556786 -42597096 + LTR16A LTR ERVL 47 443 -7 405 0 0 0 chr20 29557654 29557699 -42596183 + (GA)n Simple_repeat Simple_repeat 1 45 0 273 163 0 0 chr20 29557740 29557789 -42596093 + T-rich Low_complexity Low_complexity 1 49 0 1695 162 7 17 chr20 29558516 29558812 -42595070 - AluSq SINE Alu -20 293 1 330 308 90 60 chr20 29559267 29559501 -42594381 - L1MC4 LINE L1 -1869 5939 5699 387 294 35 35 chr20 29559601 29559802 -42594080 + MLT1L LTR MaLR 186 386 -229 2278 299 79 16 chr20 29560156 29561154 -42592728 + MER69 DNA AcHobo 7 1067 -1459 605 245 86 40 chr20 29561207 29561533 -42592349 + MER69 DNA AcHobo 1987 2327 -199 270 177 170 78 chr20 29561566 29561707 -42592175 + LTR65 LTR ERV1 12 165 -504 1089 59 0 0 chr20 29561909 29562045 -42591837 + MER41B LTR ERV1 1 136 -499 * 1350 206 201 10 chr20 29562044 29562447 -42591435 + LTR65 LTR ERV1 151 630 -39 449 216 33 94 chr20 29562478 29562691 -42591191 + MER69 DNA AcHobo 2323 2522 -4 293 349 24 0 chr20 29763214 29763383 -42390499 + (CA)n Simple_repeat Simple_repeat 2 174 0 278 26 26 0 chr20 29763522 29763561 -42390321 + (CA)n Simple_repeat Simple_repeat 2 41 0 189 231 39 0 chr20 29764536 29764588 -42389294 + MIR SINE MIR 88 141 -67 376 311 133 26 chr20 29765149 29765419 -42388463 + L1MC4 LINE L1 7478 7776 -266 339 298 0 41 chr20 29765893 29766014 -42387868 + C-rich Low_complexity Low_complexity 1 116 0 951 253 60 3 chr20 29766469 29766769 -42387113 - MER33 DNA MER1_type -3 321 5 343 215 192 29 chr20 29766902 29767074 -42386808 - L2 LINE L2 -296 3017 2818 361 311 65 36 chr20 29767235 29767512 -42386370 - L1ME3 LINE L1 -9 6153 5869 535 147 29 110 chr20 29768808 29768944 -42384938 + FLAM_A SINE Alu 5 129 -4 1390 208 21 74 chr20 29770224 29770657 -42383225 + MER31B LTR ERV1 6 415 -51 223 287 103 15 chr20 29770703 29770839 -42383043 + L2 LINE L2 2291 2438 -876 266 279 58 12 chr20 29770859 29770945 -42382937 + MIR SINE MIR 94 183 -79 254 305 71 57 chr20 29771043 29771253 -42382629 - MLT1H LTR MaLR -242 307 95 275 193 0 36 chr20 29771353 29771436 -42382446 + (TCTA)n Simple_repeat Simple_repeat 3 82 0 808 220 105 5 chr20 29773231 29773440 -42380442 + MSTA LTR MaLR 1 230 -198 375 364 100 12 chr20 29773452 29774087 -42379795 - L2 LINE L2 -245 3068 2377 2768 168 44 2 chr20 29774187 29774664 -42379218 - LOR1a LTR ERV1 0 497 1 551 165 0 0 chr20 29774665 29774756 -42379126 - LOR1a-int LTR ERV1 -3 8117 8027 * 659 96 11 0 chr20 29774755 29774849 -42379033 - LOR1a-int LTR ERV1 -858 7262 7168 295 222 0 0 chr20 29774849 29774912 -42378970 - MER72 LTR ERV1 -650 72 10 1197 161 5 23 chr20 29774912 29775130 -42378752 - LOR1a-int LTR ERV1 -1077 7043 6830 1922 120 0 0 chr20 29775311 29775585 -42378297 - LOR1a-int LTR ERV1 -4070 4050 3777 504 198 8 25 chr20 29775573 29775694 -42378188 - LOR1a-int LTR ERV1 -2186 4145 4027 * 6862 114 43 6 chr20 29775889 29777028 -42376854 - LOR1a-int LTR ERV1 -4337 3783 2603 934 128 8 0 chr20 29777030 29777163 -42376719 + AluJo SINE Alu 3 136 -176 9384 145 49 38 chr20 29777165 29778136 -42375746 - LOR1a-int LTR ERV1 -5113 2703 1744 2198 116 0 0 chr20 29778136 29778429 -42375453 - AluY SINE Alu -18 293 1 2367 95 0 0 chr20 29778438 29778734 -42375148 - AluSg SINE Alu -14 296 1 9384 145 49 38 chr20 29778734 29780021 -42373861 - LOR1a-int LTR ERV1 -6079 1737 1 2350 162 94 9 chr20 29780021 29780479 -42373403 - LOR1a LTR ERV1 0 497 1 354 263 0 0 chr20 29781382 29781458 -42372424 + MER52A LTR ERV1 1 76 -1679 6742 193 84 22 chr20 29781458 29782938 -42370944 + MER52A LTR ERV1 184 1755 0 209 289 0 40 chr20 29782955 29783031 -42370851 + CT-rich Low_complexity Low_complexity 4 76 0 856 193 17 10 chr20 29783143 29783436 -42370446 + L1 LINE L1 3868 4239 -1907 225 156 0 0 chr20 29783436 29783481 -42370401 + Alu SINE Alu 253 297 -3 1819 134 4 14 chr20 29783481 29783758 -42370124 - AluSg SINE Alu -36 274 1 651 131 0 0 chr20 29783758 29783857 -42370025 - AluSp/q SINE Alu -5 308 210 1254 73 0 0 chr20 29786430 29786581 -42367301 + AluY SINE Alu 155 305 -6 2055 128 7 17 chr20 29786670 29786967 -42366915 - AluSx SINE Alu 0 312 19 1950 155 0 0 chr20 29787014 29787305 -42366577 - AluSg SINE Alu -19 291 1 1910 155 0 7 chr20 29787308 29787612 -42366270 - AluSx SINE Alu -10 302 1 2118 132 3 0 chr20 29787636 29787931 -42365951 + AluSx SINE Alu 13 308 -4 191 377 0 60 chr20 29788025 29788192 -42365690 + MIR3 SINE MIR 16 172 -36 1553 168 64 7 chr20 29788353 29788633 -42365249 + AluJo SINE Alu 1 296 -16 298 199 3 66 chr20 29791427 29791663 -42362219 + (TTA)n Simple_repeat Simple_repeat 1 221 0 2254 125 0 0 chr20 29793008 29793359 -42360523 - AluSx SINE Alu 0 312 1 1095 181 91 4 chr20 29793361 29793615 -42360267 - L1PA16 LINE L1 -10 6156 5881 1201 132 0 0 chr20 29795215 29795374 -42358508 + AluSg SINE Alu 1 159 -151 297 0 0 0 chr20 29795637 29795670 -42358212 + (TTGTG)n Simple_repeat Simple_repeat 2 34 0 1721 194 0 0 chr20 29795677 29795965 -42357917 - AluJo SINE Alu -23 289 2 314 291 143 79 chr20 29796097 29797028 -42356854 + L1M4 LINE L1 2131 3296 -2850 468 224 65 82 chr20 29797219 29797587 -42356295 - MLT1H LTR MaLR -13 536 117 804 203 0 0 chr20 29798351 29798696 -42355186 + (CA)n Simple_repeat Simple_repeat 1 345 0 700 243 116 71 chr20 29799033 29799366 -42354516 + MER34B LTR ERV1 6 374 -191 2230 98 21 0 chr20 29799366 29799652 -42354230 - AluSq SINE Alu -21 292 1 700 243 116 71 chr20 29799652 29799854 -42354028 + MER34B LTR ERV1 374 565 0 265 344 0 0 chr20 29799858 29799954 -42353928 + MER34 LTR ERV1 1 96 -446 555 184 24 8 chr20 29799957 29800082 -42353800 + LTR29 LTR ERV1 137 263 -359 601 267 73 6 chr20 29800084 29800249 -42353633 - MER21B LTR ERV1 -676 187 12 1030 188 105 46 chr20 29800518 29800912 -42352970 + LTR54 LTR ERV1 38 498 0 * 1277 295 66 12 chr20 29800912 29801419 -42352463 - MLT1G1 LTR MaLR -58 537 3 707 283 80 9 chr20 29803029 29803255 -42350627 - MIR SINE MIR -4 258 17 1472 295 114 32 chr20 29803354 29804127 -42349755 + L2 LINE L2 1810 2645 -669 199 277 208 30 chr20 29804171 29804373 -42349509 + MIR SINE MIR 24 261 -1 503 288 216 36 chr20 29804458 29804871 -42349011 + L2 LINE L2 2827 3313 0 281 330 103 21 chr20 29804889 29805083 -42348799 - MIR SINE MIR -22 240 31 537 195 9 0 chr20 29805178 29805291 -42348591 + MER3 DNA MER1_type 96 209 0 1995 192 6 6 chr20 29805368 29805733 -42348149 + MLT1A1 LTR MaLR 1 365 0 256 335 69 5 chr20 29809297 29809485 -42344397 + Charlie7 DNA MER1_type 36 235 -2377 203 152 9 57 chr20 29809525 29809630 -42344252 + (TG)n Simple_repeat Simple_repeat 1 100 0 995 187 77 40 chr20 29809649 29809975 -42343907 + MER31B LTR ERV1 128 465 -1 2221 129 48 10 chr20 29812668 29813063 -42340819 - L1MB3 LINE L1 -2 6181 5772 308 265 198 58 chr20 29814476 29814733 -42339149 + LTR16C LTR ERVL 127 419 -72 3263 85 28 5 chr20 29814802 29815236 -42338646 + MLT2A1 LTR ERVL 1 444 0 11407 66 9 3 chr20 29815236 29816655 -42337227 + HERVL-A1 LTR ERVL 1 1427 -4227 1270 86 15 51 chr20 29816640 29816837 -42337045 + HERVL LTR ERVL 5132 5321 -333 * 306 156 0 0 chr20 29816894 29816939 -42336943 + L1MC4 LINE L1 6659 6703 -1339 309 98 78 0 chr20 29816976 29817027 -42336855 + MLT2A2 LTR ERVL 399 453 0 281 206 31 52 chr20 29817336 29817433 -42336449 + LTR16C LTR ERVL 393 487 -4 251 319 11 11 chr20 29818665 29818759 -42335123 + GA-rich Low_complexity Low_complexity 3 96 0 456 257 117 32 chr20 29819096 29819532 -42334350 - MLT1F LTR MaLR -35 507 1 342 311 113 42 chr20 29820369 29820607 -42333275 - HAL1 LINE L1 -8 2499 2245 334 330 67 45 chr20 29821743 29822010 -42331872 + HAL1 LINE L1 1077 1349 -1158 493 352 86 17 chr20 29822144 29822445 -42331437 - HAL1 LINE L1 -1324 1183 862 31 0 0 0 chr20 29822616 29822647 -42331235 + AT_rich Low_complexity Low_complexity 1 31 0 366 234 81 117 chr20 29822772 29823079 -42330803 + MLT1I LTR MaLR 104 399 -10 320 272 156 21 chr20 29823203 29823486 -42330396 - L1M4 LINE L1 -1302 4844 4524 30 27 0 0 chr20 29824002 29824039 -42329843 + AT_rich Low_complexity Low_complexity 1 37 0 2061 129 0 3 chr20 29824039 29824348 -42329534 - AluSq SINE Alu -5 308 1 2019 194 60 17 chr20 29825379 29825781 -42328101 + MSTB1 LTR MaLR 1 419 -13 251 200 0 0 chr20 29825976 29826026 -42327856 - MLT2B3 LTR ERVL -4 550 501 210 206 199 59 chr20 29826201 29826337 -42327545 - MIR SINE MIR -38 224 70 646 286 93 46 chr20 29827397 29827875 -42326007 + MER101 LTR ERV1 24 445 -29 200 189 0 0 chr20 29828175 29828212 -42325670 + CT-rich Low_complexity Low_complexity 1 37 0 189 0 0 0 chr20 29828218 29828239 -42325643 + (TTG)n Simple_repeat Simple_repeat 1 21 0 708 279 138 74 chr20 29828483 29828948 -42324934 + MLT1H LTR MaLR 15 549 0 296 224 0 0 chr20 29829048 29829115 -42324767 - MLT1K LTR MaLR -23 565 499 2444 68 6 0 chr20 29829456 29829767 -42324115 - AluSq SINE Alu 0 313 1 802 324 71 38 chr20 29829770 29830292 -42323590 + LTR67 LTR ERVL 8 546 -11 616 289 158 16 chr20 29830766 29831231 -42322651 - MLT1H1 LTR MaLR -2 565 8 697 258 218 17 chr20 29831282 29831580 -42322302 - LTR16C LTR ERVL 0 491 134 337 289 85 63 chr20 29831841 29832111 -42321771 - MLT1K LTR MaLR -9 579 304 985 264 127 25 chr20 29835327 29835800 -42318082 + L2 LINE L2 368 888 -2426 503 297 0 0 chr20 29836347 29836485 -42317397 + L2 LINE L2 1817 1954 -1360 318 80 0 0 chr20 29836978 29837028 -42316854 + (T)n Simple_repeat Simple_repeat 1 50 0 598 274 193 43 chr20 29837034 29837774 -42316108 + L2 LINE L2 2421 3270 -2 447 284 17 0 chr20 29839051 29839167 -42314715 + MER20B DNA MER1_type 36 153 -630 261 254 0 0 chr20 29839181 29839244 -42314638 - MLT1I LTR MaLR -27 382 320 236 193 129 86 chr20 29839371 29839511 -42314371 - MLT1J LTR MaLR -253 258 113 22 35 0 0 chr20 29840532 29840561 -42313321 + AT_rich Low_complexity Low_complexity 1 29 0 399 299 72 29 chr20 29841011 29841289 -42312593 + LTR16A1 LTR ERVL 168 457 0 723 271 150 12 chr20 29841815 29842342 -42311540 - Charlie7 DNA MER1_type -243 2369 1721 1637 179 6 31 chr20 29842977 29843296 -42310586 - AluJo SINE Alu -1 311 1 288 250 28 0 chr20 29844257 29844329 -42309553 + (CA)n Simple_repeat Simple_repeat 2 75 0 189 325 53 18 chr20 29844527 29844641 -42309241 + L2 LINE L2 3149 3266 -6 277 323 181 0 chr20 29844787 29844942 -42308940 - MIR SINE MIR -19 243 61 471 264 206 18 chr20 29845373 29845649 -42308233 + LTR16C LTR ERVL 154 481 -10 235 200 12 12 chr20 29845936 29846021 -42307861 + CT-rich Low_complexity Low_complexity 1 85 0 21 0 0 0 chr20 29846560 29846581 -42307301 + AT_rich Low_complexity Low_complexity 1 21 0 2114 138 47 96 chr20 29846861 29847311 -42306571 - MSTA LTR MaLR 0 428 1 1128 120 0 0 chr20 29849314 29849502 -42304380 - AluY SINE Alu 0 312 125 258 281 10 73 chr20 29950784 29950880 -42203002 + L2 LINE L2 3183 3272 0 4783 109 9 3 chr20 29952436 29953067 -42200815 - MER41B LTR ERV1 0 635 1 245 304 7 82 chr20 29953107 29953242 -42200640 + L2 LINE L2 2943 3067 -205 4225 207 40 26 chr20 29954137 29955880 -42198002 + L1MC3 LINE L1 4457 5403 -743 354 224 0 0 chr20 29955885 29955970 -42197912 + GA-rich Low_complexity Low_complexity 2 86 0 220 341 54 73 chr20 29956427 29956764 -42197118 - L2 LINE L2 -238 3075 2741 210 91 0 0 chr20 29957273 29957306 -42196576 + (TC)n Simple_repeat Simple_repeat 2 34 0 333 270 61 71 chr20 29958021 29958217 -42195665 - MIR SINE MIR 0 262 69 327 243 140 29 chr20 29958344 29958480 -42195402 + MIR SINE MIR 14 164 -98 586 186 32 8 chr20 29958511 29958635 -42195247 + L1MA4A LINE L1 6167 6293 -10 257 291 145 17 chr20 29959794 29959911 -42193971 - MIR3 SINE MIR -65 143 12 4004 234 42 20 chr20 29960564 29962012 -42191870 + L1MB8 LINE L1 11 1515 -5344 3847 203 45 17 chr20 29962003 29963179 -42190703 + L1MB8 LINE L1 5788 6989 0 * 235 370 78 7 chr20 29963713 29963867 -42190015 - MIR3 SINE MIR -14 194 30 252 59 0 0 chr20 29964176 29964210 -42189672 + (CA)n Simple_repeat Simple_repeat 2 35 0 920 130 26 1 chr20 29969286 29969458 -42184424 + L1PA16 LINE L1 5299 5490 -675 295 178 0 0 chr20 29969458 29969503 -42184379 + AluJ/FRAM SINE Alu 229 273 -29 3887 177 14 13 chr20 29969519 29970207 -42183675 + L1PA16 LINE L1 5476 6164 -2 216 86 0 0 chr20 29971174 29971209 -42182673 + (TG)n Simple_repeat Simple_repeat 2 36 0 1188 157 40 0 chr20 29972043 29972241 -42181641 + LTR39 LTR ERV1 1 206 -577 186 43 0 0 chr20 29972423 29972446 -42181436 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 2076 18 0 0 chr20 29972507 29972735 -42181147 + AluYa5 SINE Alu 79 306 -5 6748 96 11 1 chr20 29972863 29974691 -42179191 - L1PA11 LINE L1 0 6174 4327 3662 128 7 2 chr20 29974691 29975246 -42178636 + L1PA11 LINE L1 3772 4329 -1817 789 188 34 0 chr20 29975525 29975674 -42178208 + MER5A DNA MER1_type 1 154 -35 381 356 54 79 chr20 29975921 29976611 -42177271 - L2 LINE L2 -7 3265 2584 303 146 0 0 chr20 29977366 29977421 -42176461 + (TCCC)n Simple_repeat Simple_repeat 4 58 0 2001 136 69 28 chr20 29977426 29977786 -42176096 + THE1C LTR MaLR 1 375 0 889 177 111 44 chr20 29978110 29978415 -42175467 + MER66A LTR ERV1 97 408 -70 8728 201 93 28 chr20 29978459 29980489 -42173393 + MER66A-int LTR ERV1 3 2164 -4512 6249 212 66 24 chr20 29980482 29981740 -42172142 + MER66A-int LTR ERV1 1701 3531 -3145 * 2076 105 0 11 chr20 29981740 29982066 -42171816 + AluSx SINE Alu 1 323 0 6249 212 66 24 chr20 29982066 29982246 -42171636 + MER66A-int LTR ERV1 3531 3702 -2974 388 267 10 0 chr20 29982236 29982337 -42171545 + MER66A-int LTR ERV1 4060 4161 -2515 * 3379 171 45 71 chr20 29982307 29983210 -42170672 + MER66-int LTR ERV1 2411 4941 -1735 1575 155 69 28 chr20 29983185 29983475 -42170407 + MER66-int LTR ERV1 6366 6667 -9 * 251 309 49 0 chr20 29983605 29983686 -42170196 - L2 LINE L2 0 3272 3188 534 231 38 6 chr20 29983712 29983872 -42170010 - Charlie4 DNA MER1_type -49 1912 1748 407 235 59 47 chr20 29983887 29984057 -42169825 - Charlie4 DNA MER1_type -1766 195 24 728 230 88 13 chr20 29984776 29985002 -42168880 + L2 LINE L2 2336 2578 -736 192 311 108 20 chr20 29985659 29985807 -42168075 + L2 LINE L2 1611 1771 -1543 235 390 7 14 chr20 29986197 29986338 -42167544 + L2 LINE L2 2213 2352 -962 627 258 11 39 chr20 29986858 29987036 -42166846 + MER5B DNA MER1_type 3 175 -3 1150 162 5 68 chr20 29987097 29987340 -42166542 - AluJb SINE Alu 0 312 87 1329 234 20 20 chr20 29987345 29987696 -42166186 + L1MCa LINE L1 1177 1527 -5037 1170 189 16 28 chr20 29987899 29988147 -42165735 - LTR52 LTR ERVL -3 418 174 897 199 9 66 chr20 29988144 29988370 -42165512 - LTR52 LTR ERVL -206 215 3 * 995 256 69 11 chr20 29988372 29988736 -42165146 + L1MCa LINE L1 1640 1982 -4763 15345 143 21 18 chr20 29988736 29991147 -42162735 + Tigger1 DNA MER2_type 1 2418 0 995 256 69 11 chr20 29991147 29991312 -42162570 + L1MCa LINE L1 1982 2393 -4352 597 217 23 19 chr20 29991304 29991504 -42162378 + L1MCa LINE L1 1 163 -5882 * 2716 243 46 38 chr20 29991510 29991855 -42162027 + L1MCa LINE L1 2978 3319 -3245 2460 88 0 0 chr20 29991855 29992161 -42161721 + AluSg SINE Alu 1 306 -4 2716 243 46 38 chr20 29992161 29992687 -42161195 + L1MCa LINE L1 3319 3861 -2703 2363 106 0 0 chr20 29992687 29992999 -42160883 + AluSx SINE Alu 1 312 0 2716 243 46 38 chr20 29992999 29993169 -42160713 + L1MCa LINE L1 3861 4028 -2536 4709 137 16 0 chr20 29993178 29993871 -42160011 - L1PA15 LINE L1 -2 6163 5460 831 220 49 26 chr20 29993871 29994135 -42159747 + L1MCa LINE L1 4831 5100 -1464 359 211 11 0 chr20 29994541 29994636 -42159246 + (TA)n Simple_repeat Simple_repeat 2 97 0 436 320 141 0 chr20 29994966 29995172 -42158710 - MIR SINE MIR -12 250 16 211 232 87 73 chr20 29996327 29996412 -42157470 + MIR SINE MIR 11 97 -111 264 289 22 0 chr20 29996781 29996871 -42157011 + MER94 DNA DNA 1 92 -42 604 84 0 0 chr20 29997542 29997625 -42156257 + MLT2A2 LTR ERVL 371 453 0 4088 93 21 12 chr20 29998003 29998573 -42155309 + L1PA16 LINE L1 5583 6157 -9 337 320 82 17 chr20 29998834 29999065 -42154817 - L1MDa LINE L1 -1724 4816 4571 843 262 35 38 chr20 29999214 29999527 -42154355 - LTR16C LTR ERVL -1 490 179 242 272 25 25 chr20 30001538 30001619 -42152263 + L2 LINE L2 3225 3305 -8 456 267 0 0 chr20 30002595 30002685 -42151197 - MER81 DNA DNA -15 99 10 1080 299 49 13 chr20 30005374 30005762 -42148120 + LTR16C LTR ERVL 89 490 -1 322 228 0 0 chr20 30005941 30005998 -42147884 - MER5A DNA MER1_type -123 66 10 2178 129 7 0 chr20 30006030 30006339 -42147543 - AluSx SINE Alu -1 311 1 557 199 64 0 chr20 30006848 30007004 -42146878 - L1MC5 LINE L1 -520 7441 7276 383 299 126 11 chr20 30007027 30007376 -42146506 - L1MC4a LINE L1 -492 7710 7394 451 291 62 19 chr20 30007453 30007663 -42146219 - L1MC4 LINE L1 -995 7047 6829 615 262 108 112 chr20 30007846 30008889 -42144993 - L1MC4a LINE L1 -1352 6850 5812 229 282 39 0 chr20 30008872 30008950 -42144932 - L1MC4a LINE L1 -2379 4161 4081 * 489 219 0 0 chr20 30009505 30009610 -42144272 - L1MC4a LINE L1 -3778 2762 2658 1129 256 66 13 chr20 30009623 30010251 -42143631 - L1MDa LINE L1 -2146 4394 3603 506 273 53 0 chr20 30010255 30010442 -42143440 - L1MDa LINE L1 -3384 3156 2960 3139 144 86 7 chr20 30010442 30011048 -42142834 - L1 LINE L1 -1107 5039 4386 * 6899 208 61 45 chr20 30011023 30013287 -42140595 - L1MDa LINE L1 -4043 2497 21 233 248 0 57 chr20 30013602 30013684 -42140198 + GA-rich Low_complexity Low_complexity 4 80 -22 2309 128 31 19 chr20 30013684 30014044 -42139838 - THE1B LTR MaLR 0 364 1 233 248 0 57 chr20 30014044 30014066 -42139816 + GA-rich Low_complexity Low_complexity 80 102 0 2309 233 46 61 chr20 30015001 30015734 -42138148 - MER72 LTR ERV1 0 722 1 870 260 66 112 chr20 30016968 30017603 -42136279 - MER77 LTR ERV1 -4 601 79 22 0 0 0 chr20 30018253 30018275 -42135607 + AT_rich Low_complexity Low_complexity 1 22 0 561 234 0 0 chr20 30018670 30018828 -42135054 + (TG)n Simple_repeat Simple_repeat 1 158 0 1710 115 4 0 chr20 30020014 30020267 -42133615 + L1PA13 LINE L1 5907 6160 -3 880 167 160 6 chr20 30020665 30020821 -42133061 + AluSx SINE Alu 2 181 -131 506 132 0 0 chr20 30021053 30021129 -42132753 + AluSg/x SINE Alu 200 275 -37 196 288 55 0 chr20 30022473 30022546 -42131336 + MIR SINE MIR 74 150 -112 255 315 113 35 chr20 30023474 30023820 -42130062 + L1MC/D LINE L1 5534 5906 -1902 590 181 60 23 chr20 30024104 30024203 -42129679 - MER65A LTR ERV1 0 445 338 377 20 20 0 chr20 30024203 30024253 -42129629 + (TG)n Simple_repeat Simple_repeat 2 52 0 590 181 60 23 chr20 30024253 30024286 -42129596 - MER65A LTR ERV1 -107 338 308 35 0 0 0 chr20 30024287 30024322 -42129560 + AT_rich Low_complexity Low_complexity 1 35 0 720 192 123 0 chr20 30024323 30024469 -42129413 - U1 snRNA snRNA -1 164 1 * 1626 158 22 103 chr20 30024459 30024819 -42129063 - MER65A LTR ERV1 -114 331 1 22 0 0 0 chr20 30024836 30024858 -42129024 + AT_rich Low_complexity Low_complexity 1 22 0 623 116 0 0 chr20 30025005 30025091 -42128791 + AluS SINE Alu 3 88 -224 185 180 20 0 chr20 30025889 30025939 -42127943 + G-rich Low_complexity Low_complexity 1 51 0 1102 126 79 0 chr20 30027248 30027438 -42126444 - MSTA-int LTR MaLR -1446 205 1 2183 171 63 19 chr20 30027438 30027848 -42126034 - MSTA LTR MaLR 0 428 1 818 244 111 22 chr20 30027852 30028123 -42125759 + MLT1E1 LTR MaLR 359 653 -1 202 343 67 0 chr20 30028626 30028731 -42125151 + MIR SINE MIR 33 144 -118 447 231 0 0 chr20 30029396 30029556 -42124326 + (TG)n Simple_repeat Simple_repeat 2 161 0 346 373 80 0 chr20 30029617 30029818 -42124064 - MIR SINE MIR -32 230 14 685 263 16 0 chr20 30029823 30030009 -42123873 - MER5A DNA MER1_type 0 189 1 1232 196 93 63 chr20 30030637 30030908 -42122974 - MER31B LTR ERV1 -77 389 102 2291 107 0 10 chr20 30030908 30031218 -42122664 - AluSc SINE Alu -2 307 1 1232 196 93 63 chr20 30031218 30031324 -42122558 - MER31B LTR ERV1 -364 102 1 781 248 118 4 chr20 30032139 30032385 -42121497 - LTR16A LTR ERVL -3 447 174 219 218 113 60 chr20 30032590 30032723 -42121159 + L2 LINE L2 3162 3301 -12 250 221 71 97 chr20 30033747 30033860 -42120022 + L1ME4a LINE L1 5619 5728 -393 292 181 117 32 chr20 30034077 30034171 -42119711 + L1ME4a LINE L1 6001 6102 -19 220 296 102 9 chr20 30035187 30035295 -42118587 + MIR3 SINE MIR 6 123 -85 * 230 310 28 0 chr20 30035291 30035362 -42118520 + MIR SINE MIR 163 235 -27 849 230 10 29 chr20 30036984 30037188 -42116694 + MIR SINE MIR 53 252 -10 1423 171 43 4 chr20 30038025 30038282 -42115600 - AluJo SINE Alu -22 290 24 195 405 53 8 chr20 30038706 30038837 -42115045 - MER5B DNA MER1_type -35 143 7 5104 192 49 11 chr20 30038895 30040404 -42113478 - L1MC1 LINE L1 -6 6327 4756 2972 229 60 25 chr20 30040688 30041038 -42112844 - L1MCa LINE L1 -5004 1041 704 1697 78 181 30 chr20 30041038 30041308 -42112574 - AluY SINE Alu 0 311 1 2972 229 60 25 chr20 30041308 30042008 -42111874 - L1MCa LINE L1 -5341 704 4 * 4106 185 68 41 chr20 30042006 30042957 -42110925 - L1MC3 LINE L1 -293 7492 6516 268 233 38 38 chr20 30042957 30043090 -42110792 + Zaphod DNA AcHobo 837 969 -3062 1048 210 34 128 chr20 30043152 30043418 -42110464 + Zaphod DNA AcHobo 3601 3891 -140 1692 191 0 0 chr20 30043418 30043700 -42110182 + AluJo SINE Alu 7 288 -24 1048 210 34 128 chr20 30043700 30043722 -42110160 + Zaphod DNA AcHobo 3891 3913 -118 198 71 0 0 chr20 30043722 30043750 -42110132 + (CA)n Simple_repeat Simple_repeat 2 29 0 1048 210 34 128 chr20 30043750 30043936 -42109946 + Zaphod DNA AcHobo 3913 4031 0 2058 124 14 0 chr20 30044183 30044474 -42109408 + AluSg SINE Alu 1 295 -15 218 297 69 10 chr20 30044632 30044733 -42109149 + L2 LINE L2 2651 2757 -557 3728 110 22 73 chr20 30045691 30046195 -42107687 + LTR9 LTR ERV1 1 466 -146 2544 74 0 0 chr20 30046195 30046504 -42107378 - AluY SINE Alu 0 311 3 3728 110 22 73 chr20 30046504 30046644 -42107238 + LTR9 LTR ERV1 466 612 0 2282 164 45 108 chr20 30046792 30047456 -42106426 - LTR26E LTR ERV1 0 622 1 33 25 0 0 chr20 30047741 30047781 -42106101 + AT_rich Low_complexity Low_complexity 1 40 0 186 323 0 0 chr20 30049656 30049721 -42104161 - L2 LINE L2 -667 2647 2583 201 222 0 0 chr20 30049978 30050014 -42103868 + (CA)n Simple_repeat Simple_repeat 2 37 0 1843 117 24 87 chr20 30050351 30050684 -42103198 - AluSx SINE Alu 0 312 1 229 246 56 48 chr20 30051240 30051366 -42102516 + MER65A LTR ERV1 1 127 -318 21 0 0 0 chr20 30051415 30051436 -42102446 + AT_rich Low_complexity Low_complexity 1 21 0 1438 222 106 0 chr20 30051865 30052167 -42101715 + Tigger7 DNA MER2_type 11 344 -389 469 213 43 0 chr20 30052184 30052278 -42101604 + Tigger7 DNA MER2_type 2390 2487 0 292 198 58 23 chr20 30052280 30052366 -42101516 - L1MC/D LINE L1 -491 5868 5780 300 232 274 0 chr20 30052921 30053016 -42100866 - MER91C DNA MER1_type 0 140 20 334 242 0 0 chr20 30053329 30053391 -42100491 + Tigger7 DNA MER2_type 2526 2587 0 302 230 62 18 chr20 30053391 30053504 -42100378 - L1MD2 LINE L1 -490 5869 5752 351 262 126 43 chr20 30055888 30056340 -42097542 - MLT1H LTR MaLR -22 533 51 1213 255 152 30 chr20 30058423 30058541 -42095341 + L1MB5 LINE L1 5329 5431 -743 291 71 0 0 chr20 30058541 30058583 -42095299 + (CA)n Simple_repeat Simple_repeat 2 43 0 1213 255 152 30 chr20 30058583 30059194 -42094688 + L1MB5 LINE L1 5431 6166 -8 2425 98 0 16 chr20 30059839 30060157 -42093725 + AluSq SINE Alu 1 313 0 338 312 139 6 chr20 30061881 30062054 -42091828 + L1M4 LINE L1 2972 3167 -2979 599 275 75 15 chr20 30062384 30062584 -42091298 - MIR SINE MIR -23 239 28 998 293 77 35 chr20 30062667 30062798 -42091084 + L1M4 LINE L1 3630 3754 -2392 2201 169 0 3 chr20 30062798 30063147 -42090735 + MER7A DNA MER2_type 1 346 0 998 293 77 35 chr20 30063147 30063990 -42089892 + L1M4 LINE L1 3754 4645 -1501 277 192 34 0 chr20 30064862 30064940 -42088942 - MIR SINE MIR -62 146 100 389 256 10 56 chr20 30065774 30065915 -42087967 + MIR SINE MIR 30 157 -86 339 202 395 0 chr20 30066192 30066311 -42087571 + MER5A DNA MER1_type 17 182 -7 228 275 210 7 chr20 30066342 30066480 -42087402 - MER5B DNA MER1_type -8 170 5 3956 82 37 4 chr20 30066940 30067476 -42086406 + MER41A LTR ERV1 1 554 0 246 270 14 0 chr20 30067714 30067788 -42086094 + (CA)n Simple_repeat Simple_repeat 2 76 0 2040 117 3 3 chr20 30067938 30068316 -42085566 + AluSq SINE Alu 1 378 0 22 0 0 0 chr20 30068539 30068561 -42085321 + AT_rich Low_complexity Low_complexity 1 22 0 3099 128 49 59 chr20 30068570 30069178 -42084704 - MER51C LTR ERV1 0 640 1 198 308 192 33 chr20 30069219 30069339 -42084543 + MIR3 SINE MIR 58 196 -12 302 358 102 6 chr20 30069484 30069660 -42084222 + MIR3 SINE MIR 12 204 -4 238 278 205 60 chr20 30070773 30070924 -42082958 + MER5A DNA MER1_type 17 189 0 635 270 86 17 chr20 30071218 30071451 -42082431 + MIR SINE MIR 14 262 0 227 336 88 16 chr20 30071948 30072073 -42081809 + MIR SINE MIR 59 192 -70 502 280 79 15 chr20 30072750 30073190 -42080692 + MER90 LTR ERV1 71 613 -1 237 371 111 25 chr20 30073258 30073770 -42080112 - L2 LINE L2 -457 2857 2302 198 161 89 36 chr20 30073976 30074032 -42079850 + MIR SINE MIR 90 148 -114 276 77 0 0 chr20 30077828 30077867 -42076015 + (TG)n Simple_repeat Simple_repeat 1 39 0 437 241 37 129 chr20 30077913 30078207 -42075675 + LTR16A1 LTR ERVL 11 277 -180 1388 241 50 37 chr20 30078221 30078682 -42075200 - MLT1H1 LTR MaLR -2 553 87 976 145 48 0 chr20 30078685 30078871 -42075011 + L1PA15 LINE L1 5141 5335 -811 4565 136 23 3 chr20 30078876 30079609 -42074273 + L1PA15 LINE L1 5416 6163 -2 302 247 26 0 chr20 30079610 30079687 -42074195 - MLT1H1 LTR MaLR -486 104 26 509 228 107 0 chr20 30079697 30079846 -42074036 + LTR16A1 LTR ERVL 286 450 -7 2235 160 18 98 chr20 30079974 30080473 -42073409 - LTR32 LTR ERVL 0 471 13 343 261 185 62 chr20 30080472 30080828 -42073054 + MLT1L LTR MaLR 209 608 -7 * 448 287 32 45 chr20 30081541 30081788 -42072094 - LTR16C LTR ERVL 0 491 248 1941 154 92 15 chr20 30081836 30082226 -42071656 + LTR24 LTR ERV1 10 429 -38 4311 177 26 22 chr20 30082265 30083121 -42070761 - MER4D LTR ERV1 -8 895 34 3941 158 6 2 chr20 30083121 30083753 -42070129 - MER41B LTR ERV1 0 635 1 4311 177 26 22 chr20 30083753 30083788 -42070094 - MER4D LTR ERV1 -869 34 1 289 93 0 0 chr20 30083788 30083831 -42070051 + LTR24 LTR ERV1 425 467 0 2753 147 14 0 chr20 30083834 30084256 -42069626 - MSTA LTR MaLR 0 428 1 1078 168 66 168 chr20 30084500 30084987 -42068895 + LTR23 LTR ERV1 1 437 0 384 259 104 80 chr20 30085096 30085308 -42068574 + HAL1 LINE L1 1036 1252 -1255 1242 264 53 24 chr20 30085332 30085782 -42068100 + HAL1 LINE L1 1475 1937 -570 974 223 9 24 chr20 30085816 30086027 -42067855 - MER58A DNA MER1_type -15 209 2 703 264 75 42 chr20 30086056 30086390 -42067492 + HAL1 LINE L1 1991 2335 -172 406 245 159 13 chr20 30086702 30086853 -42067029 + MER115 DNA AcHobo 425 597 -96 300 263 114 9 chr20 30087438 30087552 -42066330 - MIR SINE MIR -51 211 86 622 224 80 40 chr20 30088525 30088726 -42065156 + MER3 DNA MER1_type 1 209 0 254 256 12 12 chr20 30090395 30090481 -42063401 - MER5A DNA MER1_type -78 111 26 882 225 76 45 chr20 30091785 30092140 -42061742 + MLT1B LTR MaLR 1 366 -24 2931 218 156 23 chr20 30093015 30093959 -42059923 - LTR28 LTR ERV1 -4 1016 1 21 36 0 0 chr20 30094315 30094343 -42059539 + AT_rich Low_complexity Low_complexity 1 28 0 217 317 124 35 chr20 30094428 30094630 -42059252 + MIR SINE MIR 32 251 -11 360 303 42 8 chr20 30095013 30095132 -42058750 + MIR SINE MIR 66 188 -74 457 331 104 18 chr20 30096530 30096868 -42057014 + LTR16C LTR ERVL 125 491 0 322 225 162 0 chr20 30097226 30097337 -42056545 - MIR3 SINE MIR -49 159 31 676 157 0 35 chr20 30097426 30097541 -42056341 + FLAM_A SINE Alu 26 136 -6 197 81 0 27 chr20 30098128 30098165 -42055717 + (TTTTTG)n Simple_repeat Simple_repeat 1 36 0 202 355 74 33 chr20 30098511 30098632 -42055250 - L3 LINE CR1 -6 1571 1446 194 376 68 8 chr20 30098909 30099042 -42054840 - L2 LINE L2 -1995 1319 1179 1116 228 83 32 chr20 30100851 30101280 -42052602 - MLT1G1 LTR MaLR 0 595 1 354 382 73 9 chr20 30102719 30102939 -42050943 + ERVL LTR ERVL 2020 2253 -3511 369 230 106 6 chr20 30104196 30104357 -42049525 + LTR16C LTR ERVL 252 428 -63 182 275 42 120 chr20 30104637 30104779 -42049103 - MIR SINE MIR -21 241 111 207 302 160 35 chr20 30108436 30108605 -42045277 + MIR3 SINE MIR 19 208 0 216 250 0 0 chr20 30108928 30108992 -42044890 + GA-rich Low_complexity Low_complexity 1 64 0 646 283 0 0 chr20 30109721 30109905 -42043977 - L1PB4 LINE L1 -1 6155 5972 1163 218 97 12 chr20 30109917 30110137 -42043745 - L1 LINE L1 -3466 2680 2480 306 0 0 0 chr20 30110137 30110171 -42043711 + (TG)n Simple_repeat Simple_repeat 2 35 0 198 91 0 0 chr20 30110170 30110203 -42043679 + (TA)n Simple_repeat Simple_repeat 1 33 0 * 1163 218 97 12 chr20 30110171 30110312 -42043570 - L1 LINE L1 -3666 2480 2323 481 284 109 0 chr20 30111526 30111709 -42042173 + LTR16A1 LTR ERVL 255 457 0 1099 281 123 20 chr20 30111969 30112524 -42041358 - MER115 DNA AcHobo 0 693 20 360 305 62 0 chr20 30112539 30112667 -42041215 + MIR3 SINE MIR 68 203 -5 14977 144 24 19 chr20 30114269 30116676 -42037206 + Tigger1 DNA MER2_type 1 2418 0 219 250 0 0 chr20 30117691 30117751 -42036131 + A-rich Low_complexity Low_complexity 1 60 0 2686 143 25 33 chr20 30118130 30118619 -42035263 + MER31A LTR ERV1 1 485 0 329 308 38 30 chr20 30119613 30119746 -42034136 + L2 LINE L2 3139 3272 0 965 250 119 84 chr20 30120046 30120734 -42033148 - L1ME3A LINE L1 -1 6169 5458 4880 194 49 22 chr20 30120737 30121493 -42032389 - L1MD1 LINE L1 0 6636 5901 2916 154 35 37 chr20 30121493 30121980 -42031902 + MER66B LTR ERV1 1 486 0 4880 194 49 22 chr20 30121980 30122461 -42031421 - L1MD1 LINE L1 -735 5901 5378 1886 121 4 8 chr20 30122461 30122758 -42031124 - AluSg SINE Alu 0 310 30 4880 194 49 22 chr20 30122758 30122803 -42031079 - L1MD1 LINE L1 -1258 5378 5336 595 270 62 24 chr20 30122804 30123093 -42030789 - L1MD1 LINE L1 -2401 4139 3840 1119 133 0 17 chr20 30123105 30123278 -42030604 - Tigger7 DNA MER2_type -6 2481 2312 5278 230 89 31 chr20 30123308 30125468 -42028414 - L1MD1 LINE L1 -2836 3704 1671 240 86 0 0 chr20 30125468 30125503 -42028379 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 5278 230 89 31 chr20 30125503 30126248 -42027634 - L1MD1 LINE L1 -4869 1671 971 2054 199 34 10 chr20 30126248 30126660 -42027222 - L1MB2 LINE L1 -4 6167 5746 5278 230 89 31 chr20 30126660 30126962 -42026920 - L1MD1 LINE L1 -5569 971 2 1506 279 44 17 chr20 30128218 30128744 -42025138 - MLT1H1 LTR MaLR -7 548 9 864 215 42 77 chr20 30129176 30129436 -42024446 - MLT1A2 LTR MaLR -119 255 5 198 71 0 0 chr20 30129493 30129521 -42024361 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 240 114 0 0 chr20 30130771 30130806 -42023076 + MIR SINE MIR 215 249 -13 215 203 279 0 chr20 30131487 30131566 -42022316 + L2 LINE L2 1803 1903 -1411 738 319 93 28 chr20 30131623 30132094 -42021788 + L2 LINE L2 2323 2824 -490 1021 235 86 52 chr20 30132099 30132619 -42021263 + MLT1F LTR MaLR 8 538 -4 766 310 65 36 chr20 30132630 30133017 -42020865 + L2 LINE L2 2862 3259 -54 503 212 82 27 chr20 30133114 30133260 -42020622 + MLT1H1 LTR MaLR 402 555 0 276 29 0 0 chr20 30134550 30134584 -42019298 + AluY SINE Alu 8 41 -262 360 319 43 14 chr20 30134618 30134759 -42019123 - MIR SINE MIR -65 197 53 1834 152 3 3 chr20 30135259 30135569 -42018313 + AluJo SINE Alu 1 310 0 674 211 86 0 chr20 30136424 30136576 -42017306 + MER5B DNA MER1_type 1 165 -13 409 236 32 32 chr20 30136577 30136700 -42017182 - MER5A DNA MER1_type 0 189 67 312 221 258 6 chr20 30136944 30137107 -42016775 - LTR37A LTR ERV1 -2 424 221 231 179 104 0 chr20 30137074 30137141 -42016741 - LTR37B LTR ERV1 -172 296 223 * 1391 112 0 115 chr20 30137322 30137608 -42016274 - AluY SINE Alu -4 307 55 23 33 0 0 chr20 30138028 30138058 -42015824 + AT_rich Low_complexity Low_complexity 1 30 0 3126 178 7 1 chr20 30138241 30138937 -42014945 - L1P4 LINE L1 -719 5446 4747 827 324 82 9 chr20 30138998 30139573 -42014309 - L1M4 LINE L1 -1941 4205 3589 824 285 83 21 chr20 30139745 30140481 -42013401 - L1M4 LINE L1 -3082 3064 2277 3524 207 55 14 chr20 30140500 30141307 -42012575 - L1MC3 LINE L1 -346 7439 6600 368 246 12 12 chr20 30141394 30141561 -42012321 + (TA)n Simple_repeat Simple_repeat 1 167 0 237 183 0 67 chr20 30141581 30141641 -42012241 + L1MC4 LINE L1 6648 6703 -1339 255 350 21 0 chr20 30141648 30141745 -42012137 + (CATA)n Simple_repeat Simple_repeat 3 101 0 1815 239 101 74 chr20 30141745 30142763 -42011119 - L1MC3 LINE L1 -1139 6646 5601 3572 216 33 16 chr20 30142774 30143695 -42010187 - L1MB8 LINE L1 -1 6177 5240 3090 225 16 12 chr20 30143695 30144336 -42009546 - MER82 DNA MER2_type 0 653 11 538 263 48 0 chr20 30144347 30144533 -42009349 - L1MB8 LINE L1 -905 5241 5047 452 191 45 0 chr20 30144539 30144628 -42009254 + MLT2B1 LTR ERVL 425 517 -3 963 256 97 22 chr20 30144652 30144973 -42008909 + ERVL-B1 LTR ERVL 27 371 -5393 805 281 35 17 chr20 30144965 30145196 -42008686 - ERVL LTR ERVL -5192 572 338 * 16347 182 26 11 chr20 30145160 30148068 -42005814 + ERVL LTR ERVL 2122 5074 -690 2990 264 77 6 chr20 30148118 30149238 -42004644 - L1MB8 LINE L1 -2771 3375 2177 2329 106 0 0 chr20 30150257 30150558 -42003324 + AluSc SINE Alu 1 301 -8 322 250 54 36 chr20 30151507 30151619 -42002263 - MLT1J LTR MaLR 0 511 398 396 282 69 0 chr20 30151829 30151960 -42001922 - MLT1J LTR MaLR -369 142 3 2068 135 0 0 chr20 30152619 30152915 -42000967 + AluSg SINE Alu 2 297 -13 1844 189 61 0 chr20 30153002 30153330 -42000552 - MER7A DNA MER2_type 0 346 1 1763 125 64 0 chr20 30154771 30155074 -41998808 - AluSx SINE Alu 0 320 1 737 222 31 46 chr20 30158552 30158746 -41995136 + MLT2B2 LTR ERVL 14 204 -311 631 230 91 0 chr20 30158802 30158967 -41994915 + MLT1H LTR MaLR 3 182 -367 253 289 75 31 chr20 30159643 30159743 -41994139 + MIR SINE MIR 87 198 -64 186 43 0 0 chr20 30159743 30159766 -41994116 + (CATATA)n Simple_repeat Simple_repeat 4 26 0 253 289 75 31 chr20 30159766 30159824 -41994058 + MIR SINE MIR 198 252 -10 210 37 0 0 chr20 30159857 30159884 -41993998 + (CAA)n Simple_repeat Simple_repeat 2 28 0 462 159 0 92 chr20 30160049 30160244 -41993638 + (TG)n Simple_repeat Simple_repeat 2 178 0 358 194 0 67 chr20 30160283 30160672 -41993210 + (TG)n Simple_repeat Simple_repeat 1 362 0 474 151 6 47 chr20 30160715 30160887 -41992995 + (TG)n Simple_repeat Simple_repeat 2 166 0 886 161 12 36 chr20 30162245 30162413 -41991469 - MLT1A1 LTR MaLR 0 365 202 2925 184 94 7 chr20 30162414 30163012 -41990870 - LTR34 LTR ERV1 -1 698 49 402 21 0 0 chr20 30163034 30163081 -41990801 + (TA)n Simple_repeat Simple_repeat 1 47 0 3146 58 5 0 chr20 30163084 30163460 -41990422 - L1PA8 LINE L1 -13 6159 5782 481 248 16 39 chr20 30163579 30163708 -41990174 - MLT1A1 LTR MaLR -302 126 1 455 269 132 55 chr20 30164475 30164802 -41989080 + L1MB4 LINE L1 525 876 -5508 1759 163 118 138 chr20 30164807 30165483 -41988399 - MER4A LTR ERV1 -1 663 1 1483 276 5 5 chr20 30165497 30165928 -41987954 + L1MB4 LINE L1 2535 2965 -3417 2607 184 86 60 chr20 30166006 30166114 -41987768 + MER21A LTR ERV1 12 116 -747 276 30 0 0 chr20 30166114 30166147 -41987735 + (TC)n Simple_repeat Simple_repeat 2 34 0 2607 184 86 60 chr20 30166147 30166809 -41987073 + MER21A LTR ERV1 116 860 -3 279 245 78 0 chr20 30166815 30166917 -41986965 + L1MB4 LINE L1 2959 3068 -3314 5845 181 16 47 chr20 30166929 30167108 -41986774 + L1MC1 LINE L1 185 368 -6058 937 226 146 49 chr20 30167108 30167498 -41986384 + MSTC LTR MaLR 1 428 0 5845 181 16 47 chr20 30167498 30168540 -41985342 + L1MC1 LINE L1 368 1368 -5058 3162 116 22 45 chr20 30168537 30168745 -41985137 + L1P LINE L1 2634 2845 -3301 * 2316 119 0 0 chr20 30168745 30169055 -41984827 + AluSg SINE Alu 1 310 0 3162 116 22 45 chr20 30169055 30169397 -41984485 + L1P LINE L1 2845 3171 -2975 17851 92 10 2 chr20 30169397 30171777 -41982105 - MER57A-int LTR ERV1 -394 7143 4745 5633 148 127 95 chr20 30171780 30173426 -41980456 - pTR5 LTR ERV1 0 2438 741 * 9761 113 57 11 chr20 30173417 30174946 -41978936 - MER57A-int LTR ERV1 -2781 4756 3157 8060 128 15 25 chr20 30174942 30176204 -41977678 - MER57A-int LTR ERV1 -4583 2954 1705 * 8230 141 21 10 chr20 30176198 30177452 -41976430 - MER57A-int LTR ERV1 -6269 1268 1 2410 170 15 5 chr20 30177452 30177851 -41976031 - MER57A LTR ERV1 0 403 1 5885 240 48 18 chr20 30177893 30180130 -41973752 + L1MC1 LINE L1 2051 4357 -2069 1325 231 151 9 chr20 30180134 30180597 -41973285 + L1MC1 LINE L1 4544 5072 -1354 2058 118 0 0 chr20 30180602 30180921 -41972961 + AluSg SINE Alu 1 319 0 6184 152 35 10 chr20 30180921 30182027 -41971855 + L1MC1 LINE L1 5481 6613 0 4659 219 95 25 chr20 30182023 30184264 -41969618 + L1MB4 LINE L1 4011 6415 -1 * 278 337 11 0 chr20 30184704 30184793 -41969089 + MIR SINE MIR 61 150 -112 367 222 76 83 chr20 30185099 30185243 -41968639 + MLT1H LTR MaLR 383 525 -24 817 260 11 6 chr20 30185339 30185520 -41968362 - MER5A DNA MER1_type -6 183 2 192 365 66 12 chr20 30185905 30186072 -41967810 + MIR SINE MIR 81 256 -6 309 74 74 25 chr20 30186299 30186420 -41967462 + (TA)n Simple_repeat Simple_repeat 1 127 0 1289 120 5 11 chr20 30186482 30186666 -41967216 + AluSc SINE Alu 1 183 -126 406 267 54 27 chr20 30186678 30186899 -41966983 + MER69 DNA AcHobo 2101 2327 -199 2190 110 17 0 chr20 30186905 30187205 -41966677 + AluSg SINE Alu 1 305 -5 1072 207 175 35 chr20 30187238 30187643 -41966239 + LTR65 LTR ERV1 3 464 -205 669 234 52 0 chr20 30187723 30187915 -41965967 + MER69 DNA AcHobo 2325 2526 0 365 238 140 61 chr20 30190447 30190540 -41963342 + MER5A DNA MER1_type 10 94 -95 248 0 0 30 chr20 30190540 30190573 -41963309 + (GTGTG)n Simple_repeat Simple_repeat 1 32 0 365 238 140 61 chr20 30190573 30190643 -41963239 + MER5A DNA MER1_type 94 186 -3 490 167 0 0 chr20 30191490 30191574 -41962308 - L1M2 LINE L1 -635 5665 5582 620 83 19 83 chr20 30191574 30191682 -41962200 + L1MA5 LINE L1 6194 6294 -6 1223 154 72 33 chr20 30192075 30192467 -41961415 - LOR1a LTR ERV1 0 497 1 1676 133 23 0 chr20 30192467 30192723 -41961159 - LOR1a-int LTR ERV1 0 8120 7859 1944 148 10 3 chr20 30192754 30193103 -41960779 - LOR1a-int LTR ERV1 -595 6163 3777 417 250 0 26 chr20 30193091 30193207 -41960675 - LOR1a-int LTR ERV1 -2186 4145 4033 * 7609 111 46 26 chr20 30193390 30193509 -41960373 - LOR1a-int LTR ERV1 -4341 3779 3664 4655 122 9 3 chr20 30193509 30194191 -41959691 + L1MA2 LINE L1 5615 6300 -4 7609 111 46 26 chr20 30194191 30195341 -41958541 - LOR1a-int LTR ERV1 -4456 3664 2485 10508 116 17 11 chr20 30195366 30197022 -41956860 - LOR1a-int LTR ERV1 -5931 2189 524 300 176 0 0 chr20 30197052 30197103 -41956779 - 5S rRNA rRNA -70 51 1 1388 144 39 0 chr20 30197193 30197422 -41956460 - LOR1a-int LTR ERV1 -7685 435 198 1817 172 44 28 chr20 30197446 30197807 -41956075 - LOR1a-int LTR ERV1 -7753 367 1 1404 180 27 12 chr20 30197807 30198204 -41955678 - LOR1a LTR ERV1 0 497 3 874 168 0 0 chr20 30198601 30198732 -41955150 - AluSq/x SINE Alu -181 131 1 236 291 171 26 chr20 30198968 30199085 -41954797 - L2 LINE L2 0 3313 3180 221 219 0 0 chr20 30199088 30199129 -41954753 + G-rich Low_complexity Low_complexity 2 42 0 475 282 73 39 chr20 30199311 30199570 -41954312 + MLT1-int LTR MaLR 334 601 -770 236 337 0 0 chr20 30199800 30199886 -41953996 + MLT1-int LTR MaLR 699 784 -587 2203 185 129 11 chr20 30200238 30200681 -41953201 - LTR42 LTR ERVL 0 495 1 1281 224 197 8 chr20 30200954 30201329 -41952553 + MLT1F1 LTR MaLR 122 567 0 181 229 125 0 chr20 30201695 30201743 -41952139 + L2 LINE L2 3204 3257 -56 2602 268 120 26 chr20 30201841 30202924 -41950958 - L1MC4 LINE L1 0 8042 6858 352 233 22 0 chr20 30204147 30204237 -41949645 - MER103 DNA DNA -65 101 10 846 251 55 25 chr20 30204429 30204664 -41949218 + MIR SINE MIR 21 262 0 948 259 71 7 chr20 30204905 30205199 -41948683 - L2 LINE L2 -899 2415 2103 413 252 7 0 chr20 30205985 30206120 -41947762 + (TCCA)n Simple_repeat Simple_repeat 1 136 0 644 237 188 11 chr20 30206294 30206480 -41947402 + MER20 DNA MER1_type 1 219 0 2015 132 0 7 chr20 30206926 30207222 -41946660 - AluSx SINE Alu -11 301 8 207 0 0 0 chr20 30207227 30207250 -41946632 + (T)n Simple_repeat Simple_repeat 1 23 0 2129 137 0 7 chr20 30208030 30208336 -41945546 + AluSp SINE Alu 2 305 -8 2882 154 9 4 chr20 30208381 30208834 -41945048 - MLT2C2 LTR ERVL -7 457 3 23 33 0 0 chr20 30208890 30208920 -41944962 + AT_rich Low_complexity Low_complexity 1 30 0 2331 113 0 0 chr20 30208962 30209273 -41944609 - AluSx SINE Alu -1 311 1 2148 100 28 0 chr20 30209473 30209764 -41944118 + AluSc SINE Alu 1 299 -10 229 302 0 0 chr20 30210570 30210633 -41943249 + (TGGA)n Simple_repeat Simple_repeat 2 64 0 774 162 0 0 chr20 30211402 30211581 -41942301 + (CA)n Simple_repeat Simple_repeat 1 179 0 638 179 5 0 chr20 30211647 30211875 -41942007 + (CA)n Simple_repeat Simple_repeat 1 229 0 288 337 17 22 chr20 30212145 30212323 -41941559 + (TAGA)n Simple_repeat Simple_repeat 2 178 0 * 361 297 29 23 chr20 30212191 30212366 -41941516 + (CAGA)n Simple_repeat Simple_repeat 4 179 0 6356 128 18 18 chr20 30213995 30214964 -41938918 + LTR5 LTR ERVK 1 969 0 203 284 98 20 chr20 30215109 30215211 -41938671 + MIR SINE MIR 37 146 -62 746 186 8 0 chr20 30215248 30215366 -41938516 + AluSq/x SINE Alu 2 120 -193 38 0 0 0 chr20 30215368 30215406 -41938476 + AT_rich Low_complexity Low_complexity 1 38 0 356 274 288 12 chr20 30218235 30218771 -41935111 - L2 LINE L2 0 3313 2584 328 292 127 11 chr20 30218785 30219045 -41934837 - L2 LINE L2 -885 2429 2140 2316 47 9 68 chr20 30219102 30219423 -41934459 + AluY SINE Alu 3 304 -7 1793 141 4 14 chr20 30219423 30219700 -41934182 - AluSg SINE Alu -36 274 1 668 121 0 0 chr20 30219700 30219799 -41934083 - AluSp/q SINE Alu -5 308 210 1254 73 0 0 chr20 30222372 30222523 -41931359 + AluY SINE Alu 155 305 -6 2055 128 7 17 chr20 30222612 30222909 -41930973 - AluSx SINE Alu 0 312 19 1950 155 0 0 chr20 30222956 30223247 -41930635 - AluSg SINE Alu -19 291 1 1910 155 0 7 chr20 30223250 30223554 -41930328 - AluSx SINE Alu -10 302 1 2118 132 3 0 chr20 30223578 30223873 -41930009 + AluSx SINE Alu 13 308 -4 191 377 0 60 chr20 30223967 30224134 -41929748 + MIR3 SINE MIR 16 172 -36 1553 168 64 7 chr20 30224295 30224575 -41929307 + AluJo SINE Alu 1 296 -16 298 199 3 66 chr20 30227369 30227605 -41926277 + (TTA)n Simple_repeat Simple_repeat 1 221 0 2254 125 0 0 chr20 30228950 30229301 -41924581 - AluSx SINE Alu 0 312 1 1095 181 91 4 chr20 30229303 30229557 -41924325 - L1PA16 LINE L1 -10 6156 5881 1201 132 0 0 chr20 30231157 30231316 -41922566 + AluSg SINE Alu 1 159 -151 297 0 0 0 chr20 30231579 30231612 -41922270 + (TTGTG)n Simple_repeat Simple_repeat 2 34 0 1721 194 0 0 chr20 30231619 30231907 -41921975 - AluJo SINE Alu -23 289 2 314 291 143 79 chr20 30232039 30232970 -41920912 + L1M4 LINE L1 2131 3296 -2850 468 224 65 82 chr20 30233161 30233529 -41920353 - MLT1H LTR MaLR -13 536 117 804 203 0 0 chr20 30234293 30234638 -41919244 + (CA)n Simple_repeat Simple_repeat 1 345 0 700 243 116 71 chr20 30234975 30235308 -41918574 + MER34B LTR ERV1 6 374 -191 2230 98 21 0 chr20 30235308 30235594 -41918288 - AluSq SINE Alu -21 292 1 700 243 116 71 chr20 30235594 30235796 -41918086 + MER34B LTR ERV1 374 565 0 265 344 0 0 chr20 30235800 30235896 -41917986 + MER34 LTR ERV1 1 96 -446 555 184 24 8 chr20 30235899 30236024 -41917858 + LTR29 LTR ERV1 137 263 -359 601 267 73 6 chr20 30236026 30236191 -41917691 - MER21B LTR ERV1 -676 187 12 1030 188 105 46 chr20 30236460 30236854 -41917028 + LTR54 LTR ERV1 38 498 0 * 1277 295 66 12 chr20 30236854 30237361 -41916521 - MLT1G1 LTR MaLR -58 537 3 707 283 80 9 chr20 30238971 30239197 -41914685 - MIR SINE MIR -4 258 17 1472 295 114 32 chr20 30239296 30240069 -41913813 + L2 LINE L2 1810 2645 -669 199 277 208 30 chr20 30240113 30240315 -41913567 + MIR SINE MIR 24 261 -1 503 288 216 36 chr20 30240400 30240813 -41913069 + L2 LINE L2 2827 3313 0 281 330 103 21 chr20 30240831 30241025 -41912857 - MIR SINE MIR -22 240 31 537 195 9 0 chr20 30241120 30241233 -41912649 + MER3 DNA MER1_type 96 209 0 1995 192 6 6 chr20 30241310 30241675 -41912207 + MLT1A1 LTR MaLR 1 365 0 256 335 69 5 chr20 30245239 30245427 -41908455 + Charlie7 DNA MER1_type 36 235 -2377 203 152 9 57 chr20 30245467 30245572 -41908310 + (TG)n Simple_repeat Simple_repeat 1 100 0 995 187 77 40 chr20 30245591 30245917 -41907965 + MER31B LTR ERV1 128 465 -1 2221 129 48 10 chr20 30248610 30249005 -41904877 - L1MB3 LINE L1 -2 6181 5772 239 280 187 47 chr20 30250418 30250675 -41903207 + LTR16C LTR ERVL 127 419 -72 3281 85 28 5 chr20 30250744 30251178 -41902704 + MLT2A1 LTR ERVL 1 444 0 10830 66 9 3 chr20 30251178 30252597 -41901285 + HERVL-A1 LTR ERVL 1 1427 -4227 1193 91 15 51 chr20 30252582 30252779 -41901103 + HERVL LTR ERVL 5132 5321 -333 * 306 156 0 0 chr20 30252836 30252881 -41901001 + L1MC4 LINE L1 6659 6703 -1339 294 98 78 0 chr20 30252918 30252969 -41900913 + MLT2A2 LTR ERVL 399 453 0 260 206 31 52 chr20 30253278 30253375 -41900507 + LTR16C LTR ERVL 393 487 -4 251 319 11 11 chr20 30254607 30254701 -41899181 + GA-rich Low_complexity Low_complexity 3 96 0 402 269 119 25 chr20 30255038 30255474 -41898408 - MLT1F LTR MaLR -35 507 1 354 311 113 42 chr20 30256311 30256549 -41897333 - HAL1 LINE L1 -8 2499 2245 348 252 97 103 chr20 30257605 30257952 -41895930 + L1ME LINE L1 683 1283 -1158 510 352 86 17 chr20 30258086 30258387 -41895495 - HAL1 LINE L1 -1324 1183 862 31 0 0 0 chr20 30258558 30258589 -41895293 + AT_rich Low_complexity Low_complexity 1 31 0 300 270 52 88 chr20 30258714 30259021 -41894861 + MLT1I LTR MaLR 104 399 -10 293 276 156 21 chr20 30259145 30259428 -41894454 - L1M4 LINE L1 -1302 4844 4524 22 35 0 0 chr20 30259944 30259973 -41893909 + AT_rich Low_complexity Low_complexity 1 29 0 2212 126 0 13 chr20 30259973 30260290 -41893592 - AluSq SINE Alu 0 313 1 1888 191 60 17 chr20 30261321 30261723 -41892159 + MSTB1 LTR MaLR 1 419 -13 238 200 0 0 chr20 30261918 30261968 -41891914 - MLT2B3 LTR ERVL -4 550 501 215 206 199 59 chr20 30262143 30262279 -41891603 - MIR SINE MIR -38 224 70 646 286 93 46 chr20 30263339 30263817 -41890065 + MER101 LTR ERV1 24 445 -29 200 189 0 0 chr20 30264117 30264154 -41889728 + CT-rich Low_complexity Low_complexity 1 37 0 189 0 0 0 chr20 30264160 30264181 -41889701 + (TTG)n Simple_repeat Simple_repeat 1 21 0 708 279 138 74 chr20 30264425 30264890 -41888992 + MLT1H LTR MaLR 15 549 0 296 224 0 0 chr20 30264990 30265057 -41888825 - MLT1K LTR MaLR -23 565 499 2444 68 6 0 chr20 30265398 30265709 -41888173 - AluSq SINE Alu 0 313 1 802 324 71 38 chr20 30265712 30266234 -41887648 + LTR67 LTR ERVL 8 546 -11 616 289 158 16 chr20 30266708 30267173 -41886709 - MLT1H1 LTR MaLR -2 565 8 697 258 218 17 chr20 30267224 30267522 -41886360 - LTR16C LTR ERVL 0 491 134 337 289 85 63 chr20 30267783 30268053 -41885829 - MLT1K LTR MaLR -9 579 304 985 264 127 25 chr20 30271269 30271742 -41882140 + L2 LINE L2 368 888 -2426 503 297 0 0 chr20 30272289 30272427 -41881455 + L2 LINE L2 1817 1954 -1360 318 80 0 0 chr20 30272920 30272970 -41880912 + (T)n Simple_repeat Simple_repeat 1 50 0 598 274 193 43 chr20 30272976 30273716 -41880166 + L2 LINE L2 2421 3270 -2 447 284 17 0 chr20 30274993 30275109 -41878773 + MER20B DNA MER1_type 36 153 -630 261 254 0 0 chr20 30275123 30275186 -41878696 - MLT1I LTR MaLR -27 382 320 236 193 129 86 chr20 30275313 30275453 -41878429 - MLT1J LTR MaLR -253 258 113 22 35 0 0 chr20 30276474 30276503 -41877379 + AT_rich Low_complexity Low_complexity 1 29 0 399 299 72 29 chr20 30276953 30277231 -41876651 + LTR16A1 LTR ERVL 168 457 0 723 271 150 12 chr20 30277757 30278284 -41875598 - Charlie7 DNA MER1_type -243 2369 1721 1637 179 6 31 chr20 30278919 30279238 -41874644 - AluJo SINE Alu -1 311 1 288 250 28 0 chr20 30280199 30280271 -41873611 + (CA)n Simple_repeat Simple_repeat 2 75 0 189 325 53 18 chr20 30280469 30280583 -41873299 + L2 LINE L2 3149 3266 -6 277 323 181 0 chr20 30280729 30280884 -41872998 - MIR SINE MIR -19 243 61 471 264 206 18 chr20 30281315 30281591 -41872291 + LTR16C LTR ERVL 154 481 -10 235 200 12 12 chr20 30281878 30281963 -41871919 + CT-rich Low_complexity Low_complexity 1 85 0 21 0 0 0 chr20 30282502 30282523 -41871359 + AT_rich Low_complexity Low_complexity 1 21 0 2114 138 47 96 chr20 30282803 30283253 -41870629 - MSTA LTR MaLR 0 428 1 1128 120 0 0 chr20 30285256 30285444 -41868438 - AluY SINE Alu 0 312 125 414 323 43 0 chr20 30286458 30286644 -41867238 + MER90 LTR ERV1 419 612 -2 363 296 51 71 chr20 30287345 30287783 -41866099 + L1MC4a LINE L1 5497 5826 -303 4633 192 32 26 chr20 30288126 30289026 -41864856 + L1MB3 LINE L1 4677 5570 -613 2314 64 0 3 chr20 30289026 30289346 -41864536 + AluY SINE Alu 1 311 0 4633 192 32 26 chr20 30289346 30289418 -41864464 + L1MB3 LINE L1 5570 5640 -543 1851 140 0 29 chr20 30289418 30289726 -41864156 + AluSq SINE Alu 2 300 -13 4633 192 32 26 chr20 30289726 30290249 -41863633 + L1MB3 LINE L1 5640 6181 -2 23 22 0 44 chr20 30291293 30291323 -41862559 + AT_rich Low_complexity Low_complexity 1 30 -13 1795 111 6 117 chr20 30291323 30291673 -41862209 - AluSx SINE Alu -1 311 1 23 22 0 44 chr20 30291673 30291687 -41862195 + AT_rich Low_complexity Low_complexity 30 43 0 421 252 7 7 chr20 30292965 30293104 -41860778 - L1MC4 LINE L1 -1 8041 7903 220 269 34 17 chr20 30293105 30293341 -41860541 + (TA)n Simple_repeat Simple_repeat 1 240 0 1128 233 55 60 chr20 30293343 30293560 -41860322 - L1MC4 LINE L1 -125 7917 7701 2016 190 98 21 chr20 30293560 30294029 -41859853 - MLT1D LTR MaLR 0 505 1 1128 233 55 60 chr20 30294029 30294214 -41859668 - L1MC4 LINE L1 -341 7701 7517 923 246 144 78 chr20 30294419 30294932 -41858950 + MLT1H LTR MaLR 1 547 -2 3186 134 2 0 chr20 30295509 30295949 -41857933 + MER1A DNA MER1_type 1 441 -88 200 271 14 14 chr20 30296282 30296352 -41857530 + (TCCA)n Simple_repeat Simple_repeat 4 73 0 316 325 12 19 chr20 30296357 30296515 -41857367 + CT-rich Low_complexity Low_complexity 1 156 0 249 245 0 0 chr20 30296529 30296631 -41857251 + (TCCA)n Simple_repeat Simple_repeat 4 105 0 658 296 35 18 chr20 30296726 30296952 -41856930 + MIR SINE MIR 10 239 -23 1058 183 37 37 chr20 30297775 30298016 -41855866 - L1ME1 LINE L1 -12 6154 5914 339 347 8 0 chr20 30298181 30298305 -41855577 + MIR SINE MIR 40 164 -98 395 238 24 40 chr20 30298447 30298573 -41855309 + MIR SINE MIR 95 218 -44 6358 225 68 34 chr20 30298728 30301024 -41852858 - L1MB7 LINE L1 -28 6654 4439 2043 108 0 0 chr20 30301024 30301301 -41852581 - AluSc SINE Alu -8 301 25 6358 225 68 34 chr20 30301301 30301322 -41852560 - L1MB7 LINE L1 -2243 4439 4420 2339 92 0 0 chr20 30301322 30301628 -41852254 - AluSg1 SINE Alu -3 306 1 6358 225 68 34 chr20 30301628 30303645 -41850237 - L1MB7 LINE L1 -2262 4420 2 658 244 10 15 chr20 30304500 30304701 -41849181 + MER69 DNA AcHobo 2323 2522 -4 183 245 75 0 chr20 30304898 30304951 -41848931 - L3 LINE CR1 -928 649 593 293 349 24 0 chr20 30307728 30307897 -41845985 + (CA)n Simple_repeat Simple_repeat 2 174 0 332 22 22 0 chr20 30308036 30308081 -41845801 + (CA)n Simple_repeat Simple_repeat 2 47 0 186 231 39 0 chr20 30309056 30309108 -41844774 + MIR SINE MIR 88 141 -67 372 311 133 26 chr20 30309669 30309939 -41843943 + L1MC4 LINE L1 7478 7776 -266 339 298 0 41 chr20 30310413 30310534 -41843348 + C-rich Low_complexity Low_complexity 1 116 0 992 250 60 3 chr20 30310989 30311289 -41842593 - MER33 DNA MER1_type -3 321 5 348 209 192 29 chr20 30311422 30311594 -41842288 - L2 LINE L2 -296 3017 2818 381 311 65 36 chr20 30311755 30312032 -41841850 - L1ME3 LINE L1 -9 6153 5869 516 135 30 113 chr20 30313331 30313464 -41840418 + FLAM_A SINE Alu 8 129 -13 1529 206 21 74 chr20 30314744 30315177 -41838705 + MER31B LTR ERV1 6 415 -51 190 278 111 8 chr20 30315223 30315349 -41838533 + L2 LINE L2 2291 2429 -885 235 279 58 12 chr20 30315379 30315465 -41838417 + MIR SINE MIR 94 183 -79 274 282 109 73 chr20 30315525 30315773 -41838109 - MLT1H LTR MaLR -198 351 95 275 193 0 36 chr20 30315873 30315956 -41837926 + (TCTA)n Simple_repeat Simple_repeat 3 82 0 861 220 105 5 chr20 30317753 30317962 -41835920 + MSTA LTR MaLR 1 230 -198 309 363 38 0 chr20 30317974 30318131 -41835751 - L2 LINE L2 -245 3068 2906 277 377 40 10 chr20 30318236 30318533 -41835349 - L2 LINE L2 -540 2774 2469 2716 170 44 2 chr20 30318709 30319186 -41834696 - LOR1a LTR ERV1 0 497 1 582 165 0 0 chr20 30319187 30319278 -41834604 - LOR1a-int LTR ERV1 -3 8117 8027 * 696 96 11 0 chr20 30319277 30319371 -41834511 - LOR1a-int LTR ERV1 -858 7262 7168 311 222 0 0 chr20 30319371 30319434 -41834448 - MER72 LTR ERV1 -650 72 10 1266 161 5 23 chr20 30319434 30319652 -41834230 - LOR1a-int LTR ERV1 -1077 7043 6830 2023 120 0 0 chr20 30319833 30320107 -41833775 - LOR1a-int LTR ERV1 -4070 4050 3777 538 190 8 25 chr20 30320095 30320216 -41833666 - LOR1a-int LTR ERV1 -2186 4145 4027 * 7208 114 43 6 chr20 30320411 30321550 -41832332 - LOR1a-int LTR ERV1 -4337 3783 2603 921 123 8 0 chr20 30321552 30321682 -41832200 + FLAM_C SINE Alu 3 133 -10 9937 145 48 37 chr20 30321684 30322658 -41831224 - LOR1a-int LTR ERV1 -5110 2706 1744 2190 116 0 0 chr20 30322658 30322952 -41830930 - AluY SINE Alu -17 294 1 2351 95 0 0 chr20 30322961 30323257 -41830625 - AluSg SINE Alu -14 296 1 9937 145 48 37 chr20 30323257 30324544 -41829338 - LOR1a-int LTR ERV1 -6079 1737 1 2328 162 94 9 chr20 30324544 30325002 -41828880 - LOR1a LTR ERV1 0 497 1 7192 194 88 22 chr20 30325905 30327461 -41826421 + MER52A LTR ERV1 1 1755 0 209 289 0 40 chr20 30327478 30327554 -41826328 + CT-rich Low_complexity Low_complexity 4 76 0 4255 194 54 41 chr20 30327647 30328907 -41824975 + L1PB4 LINE L1 3845 5213 -943 1590 193 3 3 chr20 30328907 30329207 -41824675 + AluJo SINE Alu 12 311 -1 4255 194 54 41 chr20 30329207 30329795 -41824087 + L1PB4 LINE L1 5213 5792 -364 859 52 0 17 chr20 30329850 30330002 -41823880 + L1PA4 LINE L1 6019 6168 0 1498 201 25 3 chr20 30330002 30330320 -41823562 + L1PB4 LINE L1 5829 6153 -3 357 305 9 0 chr20 30330507 30330612 -41823270 + (CAT)n Simple_repeat Simple_repeat 3 108 0 397 204 44 0 chr20 30330626 30330763 -41823119 + (CACCAT)n Simple_repeat Simple_repeat 1 143 0 482 228 0 5 chr20 30330776 30330987 -41822895 + (CACCAT)n Simple_repeat Simple_repeat 1 209 0 2187 194 36 14 chr20 30330987 30331404 -41822478 + MSTB LTR MaLR 1 426 0 598 215 6 11 chr20 30331406 30331583 -41822299 + (CACCAT)n Simple_repeat Simple_repeat 4 179 0 29 28 0 0 chr20 30332523 30332559 -41821323 + AT_rich Low_complexity Low_complexity 1 36 0 473 243 42 21 chr20 30332586 30332730 -41821152 - MIR SINE MIR -82 180 34 646 260 56 20 chr20 30333032 30333228 -41820654 - LTR16C LTR ERVL -18 473 271 22 35 0 0 chr20 30333689 30333718 -41820164 + AT_rich Low_complexity Low_complexity 1 29 0 416 306 131 33 chr20 30334274 30334611 -41819271 + MLT1I LTR MaLR 1 370 -39 4508 163 30 24 chr20 30334620 30335455 -41818427 - L1PA16 LINE L1 -9 6157 5318 * 7395 144 14 7 chr20 30335433 30336952 -41816930 - L1PA12 LINE L1 -159 6009 4503 2337 92 3 3 chr20 30336952 30337255 -41816627 - AluY SINE Alu -8 303 1 7395 144 14 7 chr20 30337255 30337340 -41816542 - L1PA12 LINE L1 -1665 4503 4420 219 69 0 0 chr20 30337340 30337369 -41816513 + (TTTA)n Simple_repeat Simple_repeat 4 32 0 7395 144 14 7 chr20 30337369 30337693 -41816189 - L1PA12 LINE L1 -1748 4420 4066 4205 139 29 3 chr20 30337699 30338410 -41815472 - L1PA15-16 LINE L1 -3866 2983 2255 1412 161 8 12 chr20 30338407 30338655 -41815227 - L1MB3 LINE L1 -236 5947 5701 * 309 276 10 0 chr20 30339179 30339277 -41814605 - MIR SINE MIR -71 191 93 562 294 77 70 chr20 30339283 30339711 -41814171 + LTR16A LTR ERVL 12 442 -8 236 261 80 106 chr20 30340288 30340476 -41813406 - MLT1L LTR MaLR -117 498 316 192 152 0 0 chr20 30340496 30340529 -41813353 + GA-rich Low_complexity Low_complexity 1 33 0 195 42 0 0 chr20 30341722 30341746 -41812136 + (TC)n Simple_repeat Simple_repeat 2 25 0 221 196 18 0 chr20 30341751 30341807 -41812075 + (TATATG)n Simple_repeat Simple_repeat 1 57 0 2190 289 92 16 chr20 30342252 30343244 -41810638 + MER69 DNA AcHobo 1 1067 -1459 357 242 48 8 chr20 30343249 30343373 -41810509 + MER69 DNA AcHobo 1942 2070 -456 180 77 0 0 chr20 30344121 30344147 -41809735 + (TC)n Simple_repeat Simple_repeat 2 27 0 256 299 0 0 chr20 30344151 30344218 -41809664 + (TA)n Simple_repeat Simple_repeat 1 67 0 333 289 113 43 chr20 30344505 30344896 -41808986 + MLT1L LTR MaLR 183 600 -15 2215 299 85 15 chr20 30345067 30346064 -41807818 + MER69 DNA AcHobo 1 1067 -1459 856 285 42 22 chr20 30346036 30346446 -41807436 + MER69 DNA AcHobo 1910 2327 -199 * 1587 213 175 25 chr20 30346480 30347052 -41806830 + LTR65 LTR ERV1 12 669 0 191 256 0 0 chr20 30397075 30397118 -41756764 - MIR SINE MIR -114 148 106 293 297 45 62 chr20 30399058 30399236 -41754646 + MIR SINE MIR 2 171 -37 681 171 0 0 chr20 30399739 30399914 -41753968 + (TG)n Simple_repeat Simple_repeat 2 176 0 189 283 0 33 chr20 30400238 30400298 -41753584 - MIR SINE MIR 0 262 205 232 256 48 33 chr20 30400423 30400553 -41753329 - L2 LINE L2 -308 3005 2872 274 320 113 13 chr20 30400698 30400848 -41753034 - MIR SINE MIR -21 241 77 519 304 136 19 chr20 30402848 30403567 -41750315 + L1M4c LINE L1 2276 3098 -3284 387 313 103 15 chr20 30403766 30403961 -41749921 + L1M4c LINE L1 3192 3403 -2979 536 294 93 15 chr20 30404125 30404506 -41749376 - L2 LINE L2 -129 3184 2768 639 88 0 0 chr20 30405987 30406078 -41747804 + (GA)n Simple_repeat Simple_repeat 1 91 0 201 74 0 0 chr20 30408830 30408857 -41745025 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 2365 217 48 33 chr20 30411309 30411889 -41741993 - MLT1E LTR MaLR -4 589 1 671 257 19 12 chr20 30412486 30412689 -41741193 + ERVL LTR ERVL 4812 5012 -647 323 241 13 0 chr20 30413900 30413979 -41739903 + LTR16C LTR ERVL 75 154 -337 416 240 50 0 chr20 30414501 30414622 -41739260 + LTR16C LTR ERVL 350 476 -15 250 339 11 69 chr20 30415167 30415356 -41738526 - MIR SINE MIR -37 225 48 418 280 23 0 chr20 30415485 30415617 -41738265 - Charlie4a DNA MER1_type -14 494 360 3352 100 13 13 chr20 30415620 30416142 -41737740 - L1PB3 LINE L1 -6 6148 5627 486 209 50 7 chr20 30416148 30416287 -41737595 + L1P LINE L1 5089 5233 -913 2062 107 71 0 chr20 30416299 30416580 -41737302 - AluSx SINE Alu -11 301 1 511 288 152 28 chr20 30416582 30416905 -41736977 - Charlie4a DNA MER1_type -145 363 1 215 214 43 43 chr20 30417178 30417248 -41736634 + MER5A DNA MER1_type 88 157 -32 * 279 258 67 22 chr20 30417199 30417288 -41736594 - MER5A DNA MER1_type -95 94 2 221 41 41 41 chr20 30417814 30417863 -41736019 + (GGA)n Simple_repeat Simple_repeat 1 49 0 201 311 75 0 chr20 30417971 30418077 -41735805 - MIR SINE MIR -115 147 34 450 160 0 0 chr20 30419689 30419764 -41734118 - MLT1J2 LTR MaLR -312 138 64 1623 186 48 3 chr20 30420973 30421306 -41732576 + MER68 LTR ERV1 43 390 -172 355 136 45 0 chr20 30421310 30421376 -41732506 + MER68 LTR ERV1 322 390 -172 347 152 45 0 chr20 30421380 30421446 -41732436 + MER68 LTR ERV1 322 390 -172 313 167 45 0 chr20 30421450 30421516 -41732366 + MER68 LTR ERV1 322 390 -172 321 167 45 0 chr20 30421520 30421586 -41732296 + MER68 LTR ERV1 322 390 -172 1013 226 48 0 chr20 30421590 30421820 -41732062 + MER68 LTR ERV1 322 562 0 250 286 98 53 chr20 30423221 30423354 -41730528 + MIR3 SINE MIR 1 139 -69 353 325 6 0 chr20 30423535 30423692 -41730190 + MER103 DNA DNA 8 165 -1 2432 146 45 7 chr20 30424440 30424884 -41728998 - MER65C LTR ERV1 0 461 1 330 224 84 28 chr20 30425106 30425213 -41728669 + Charlie7 DNA MER1_type 45 157 -2455 818 226 28 0 chr20 30425400 30425577 -41728305 + MER5A DNA MER1_type 7 188 -1 931 252 166 31 chr20 30425746 30426265 -41727617 + MLT1G LTR MaLR 1 589 -1 300 303 49 16 chr20 30426382 30426504 -41727378 - MIR3 SINE MIR -33 175 50 183 240 40 20 chr20 30426523 30426573 -41727309 + MIR SINE MIR 20 70 -192 457 275 219 1 chr20 30427489 30427659 -41726223 - MLT1J LTR MaLR -199 312 67 276 30 0 0 chr20 30431390 30431423 -41722459 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 2071 112 0 14 chr20 30431424 30431709 -41722173 - AluSq SINE Alu -32 281 1 299 299 11 0 chr20 30432614 30432701 -41721181 + MER94 DNA DNA 18 105 -29 390 300 23 0 chr20 30433567 30433697 -41720185 + LTR16A LTR ERVL 138 270 -180 370 217 24 0 chr20 30433737 30433820 -41720062 + LTR16A LTR ERVL 366 450 0 233 351 36 0 chr20 30433868 30433979 -41719903 + (CATG)n Simple_repeat Simple_repeat 3 117 0 2279 123 3 0 chr20 30435251 30435561 -41718321 - AluSx SINE Alu -1 311 1 2520 74 0 3 chr20 30435654 30435966 -41717916 - AluY SINE Alu 0 311 1 374 242 32 0 chr20 30436026 30436121 -41717761 - MLT1G1 LTR MaLR -11 584 487 290 307 88 7 chr20 30436321 30436458 -41717424 - MIR SINE MIR -8 254 107 1934 142 7 30 chr20 30437427 30437729 -41716153 - AluJb SINE Alu -17 295 1 257 164 0 18 chr20 30438033 30438088 -41715794 + GA-rich Low_complexity Low_complexity 4 57 0 1448 223 75 5 chr20 30439298 30439698 -41714184 + Charlie4a DNA MER1_type 20 447 -61 181 282 118 12 chr20 30440258 30440343 -41713539 - L2 LINE L2 -20 3293 3200 224 287 0 80 chr20 30441197 30441385 -41712497 + G-rich Low_complexity Low_complexity 4 176 0 264 301 0 66 chr20 30441490 30441673 -41712209 + G-rich Low_complexity Low_complexity 2 172 0 230 296 12 0 chr20 30442192 30442273 -41711609 + CT-rich Low_complexity Low_complexity 2 83 0 1274 241 116 45 chr20 30443622 30444153 -41709729 - MLT1G3 LTR MaLR -9 586 1 1813 242 71 35 chr20 30445083 30445824 -41708058 + L1ME LINE L1 601 1396 -5168 2291 137 0 3 chr20 30445824 30446161 -41707721 + MER1B DNA MER1_type 1 336 -1 1813 242 71 35 chr20 30446161 30446477 -41707405 + L1ME LINE L1 1396 1699 -4865 1039 122 14 0 chr20 30446479 30446626 -41707256 + AluSg/x SINE Alu 158 306 -6 2874 256 47 68 chr20 30446626 30447406 -41706476 + L1ME LINE L1 1688 2483 -4081 2245 109 20 0 chr20 30447406 30447699 -41706183 + AluY SINE Alu 1 299 -12 2874 256 47 68 chr20 30447699 30448810 -41705072 + L1ME LINE L1 2483 3686 -2878 7041 70 47 27 chr20 30448810 30450563 -41703319 - SVA Other Other -553 1384 1 2874 256 47 68 chr20 30450563 30450769 -41703113 + L1ME LINE L1 3686 3895 -2669 445 284 37 31 chr20 30450770 30450932 -41702950 - MER5B DNA MER1_type 0 178 16 1008 287 46 12 chr20 30453530 30453944 -41699938 + L1ME LINE L1 5734 6161 -421 185 178 22 0 chr20 30455160 30455205 -41698677 + (TA)n Simple_repeat Simple_repeat 1 46 0 224 0 65 0 chr20 30455661 30455692 -41698190 + (TTTTA)n Simple_repeat Simple_repeat 3 35 0 2002 119 26 0 chr20 30455697 30455965 -41697917 - AluSx SINE Alu -37 275 1 470 230 40 27 chr20 30457029 30457177 -41696705 + MER5A DNA MER1_type 6 155 -34 415 277 100 30 chr20 30457701 30458062 -41695820 - L1ME LINE L1 -301 5820 5375 2750 171 24 64 chr20 30459668 30460306 -41693576 - LTR9 LTR ERV1 0 612 1 238 298 86 7 chr20 30460463 30460614 -41693268 - LTR16A1 LTR ERVL -287 170 8 357 282 19 0 chr20 30461367 30461470 -41692412 - MIR SINE MIR -84 124 20 1594 173 13 53 chr20 30461766 30462084 -41691798 - AluJb SINE Alu -7 305 1 288 316 30 38 chr20 30463222 30463459 -41690423 - L1ME4a LINE L1 -222 5899 5665 1638 161 84 0 chr20 30463477 30463762 -41690120 + AluSx SINE Alu 1 309 -3 805 123 25 12 chr20 30463795 30463957 -41689925 + GA-rich Low_complexity Low_complexity 4 167 0 282 256 56 0 chr20 30464555 30464635 -41689247 + MIR SINE MIR 67 142 -66 345 24 0 0 chr20 30464697 30464739 -41689143 + (TGGA)n Simple_repeat Simple_repeat 3 44 0 207 311 57 25 chr20 30464859 30464981 -41688901 + MIR SINE MIR 137 262 0 5295 181 81 124 chr20 30465242 30466390 -41687492 - L1MC3 LINE L1 0 7995 6879 264 98 0 0 chr20 30466390 30466431 -41687451 + MADE1 DNA Mariner 40 80 0 5295 181 81 124 chr20 30466431 30467248 -41686634 - L1MC3 LINE L1 -1116 6879 6029 1148 226 41 126 chr20 30467729 30468279 -41685603 + MLT1G LTR MaLR 1 555 0 547 291 87 0 chr20 30468284 30468490 -41685392 - MIR SINE MIR -27 235 12 1801 171 40 70 chr20 30469724 30470052 -41683830 + MSTB1 LTR MaLR 1 314 -118 2115 129 3 0 chr20 30470052 30470346 -41683536 - AluSx SINE Alu -17 295 1 1801 171 40 70 chr20 30470346 30470462 -41683420 + MSTB1 LTR MaLR 314 432 0 1369 227 21 35 chr20 30471246 30471621 -41682261 - MLT1A2 LTR MaLR -4 370 1 1795 147 0 7 chr20 30474249 30474522 -41679360 - AluSx SINE Alu 0 312 42 1242 260 210 11 chr20 30475083 30475544 -41678338 + MLT1H1 LTR MaLR 1 553 -2 334 324 80 9 chr20 30476095 30476470 -41677412 + LTR16C LTR ERVL 75 488 -3 559 291 44 86 chr20 30477037 30477098 -41676784 + HAL1 LINE L1 621 683 -1824 1886 168 54 0 chr20 30477098 30477468 -41676414 - MLT1B LTR MaLR 0 390 1 559 291 44 86 chr20 30477468 30477997 -41675885 + HAL1 LINE L1 683 1186 -1321 659 149 8 0 chr20 30478005 30478126 -41675756 + GA-rich Low_complexity Low_complexity 4 125 0 611 316 159 32 chr20 30478144 30478648 -41675234 + HAL1 LINE L1 1385 1952 -555 373 238 97 57 chr20 30478765 30478992 -41674890 + HAL1 LINE L1 2164 2399 -108 1073 295 105 23 chr20 30479121 30479637 -41674245 + L1ME3A LINE L1 5596 6153 -17 1903 193 61 8 chr20 30480240 30480633 -41673249 + MSTB LTR MaLR 13 426 0 511 242 45 0 chr20 30482232 30482364 -41671518 - MER3 DNA MER1_type -4 205 68 231 317 10 10 chr20 30483175 30483279 -41670603 - L1M4 LINE L1 -2415 3731 3628 578 283 44 74 chr20 30483546 30483843 -41670039 - L1ME LINE L1 -404 5766 5479 317 106 29 67 chr20 30484720 30484824 -41669058 + GA-rich Low_complexity Low_complexity 3 102 0 534 140 37 37 chr20 30484847 30485011 -41668871 + GA-rich Low_complexity Low_complexity 2 165 0 214 29 57 0 chr20 30485027 30485062 -41668820 + (GGGA)n Simple_repeat Simple_repeat 4 40 0 249 33 0 0 chr20 30487383 30487413 -41666469 + (TTCA)n Simple_repeat Simple_repeat 3 32 0 235 236 318 0 chr20 30490238 30490348 -41663534 - MER5B DNA MER1_type -33 145 1 328 254 49 90 chr20 30490560 30490671 -41663211 + MIR SINE MIR 6 107 -153 2189 100 7 13 chr20 30490671 30490972 -41662910 + AluSg SINE Alu 5 303 -7 328 254 49 90 chr20 30490972 30491028 -41662854 + MIR SINE MIR 107 164 -96 197 151 19 0 chr20 30493616 30493669 -41660213 + (GTTTG)n Simple_repeat Simple_repeat 2 55 0 623 191 143 37 chr20 30496213 30496402 -41657480 + MER20 DNA MER1_type 11 219 0 200 329 27 0 chr20 30497339 30497412 -41656470 - L2 LINE L2 -9 3263 3189 328 331 45 26 chr20 30498107 30498261 -41655621 - MIR SINE MIR -97 165 9 304 329 40 26 chr20 30498596 30498748 -41655134 - MIR SINE MIR -74 188 35 1560 173 105 3 chr20 30498815 30499157 -41654725 - MLT1B LTR MaLR -8 382 6 198 264 57 57 chr20 30501557 30501663 -41652219 + L2 LINE L2 2959 3064 -208 3712 171 60 23 chr20 30503463 30504211 -41649671 + LTR39 LTR ERV1 1 776 -7 260 141 0 28 chr20 30504929 30505000 -41648882 + (TCTCTG)n Simple_repeat Simple_repeat 4 72 0 2754 161 41 4 chr20 30506461 30506972 -41646910 + L1PB4 LINE L1 5625 6154 -2 182 272 74 12 chr20 30507179 30507260 -41646622 - L2 LINE L2 -36 3236 3151 214 273 31 117 chr20 30507634 30507762 -41646120 - MIR SINE MIR -44 218 102 317 200 25 0 chr20 30508746 30508826 -41645056 + LTR16C LTR ERVL 385 466 -25 1294 296 53 8 chr20 30509165 30509658 -41644224 - L1ME1 LINE L1 -31 6135 5621 22 0 0 0 chr20 30509964 30509986 -41643896 + AT_rich Low_complexity Low_complexity 1 22 0 10986 174 10 27 chr20 30509986 30512600 -41641282 - L1PB1 LINE L1 0 6867 4303 1722 181 51 0 chr20 30512600 30512893 -41640989 - AluJb SINE Alu -4 308 1 10986 174 10 27 chr20 30512893 30513946 -41639936 - L1PB1 LINE L1 -2564 4303 3234 767 127 13 53 chr20 30513945 30514095 -41639787 - L1PB1 LINE L1 -6084 779 636 * 1087 169 0 0 chr20 30514093 30514276 -41639606 - L1PB1 LINE L1 -6678 185 3 2173 71 0 3 chr20 30514617 30514947 -41638935 - AluY SINE Alu 0 329 1 516 249 162 0 chr20 30515647 30515820 -41638062 + MER3 DNA MER1_type 9 209 0 206 253 101 13 chr20 30516409 30516488 -41637394 + MIR SINE MIR 58 143 -65 243 266 16 16 chr20 30516509 30516573 -41637309 - MER5A DNA MER1_type -6 183 120 953 206 24 28 chr20 30516574 30516822 -41637060 + L1MD3 LINE L1 7749 7995 0 287 288 92 25 chr20 30517974 30518137 -41635745 + MER5A DNA MER1_type 14 187 -2 230 208 38 0 chr20 30518994 30519047 -41634835 - L2 LINE L2 -4 3268 3214 2258 63 0 11 chr20 30520334 30520652 -41633230 - AluY SINE Alu 0 315 1 283 205 217 12 chr20 30520958 30521041 -41632841 + MLT1J1 LTR MaLR 36 135 -311 339 274 103 45 chr20 30521050 30521273 -41632609 + MLT1J2 LTR MaLR 204 439 -11 361 237 112 10 chr20 30522118 30522259 -41631623 + MIR SINE MIR 25 180 -77 476 291 118 34 chr20 30524384 30524843 -41629039 + MLT1G1 LTR MaLR 16 590 0 267 344 18 12 chr20 30525820 30525983 -41627899 + G-rich Low_complexity Low_complexity 6 169 0 266 248 53 60 chr20 30526167 30526300 -41627582 - LTR16C LTR ERVL -1 490 359 266 233 14 14 chr20 30526944 30527017 -41626865 - MER63 DNA MER1_type -11 1049 977 366 247 22 0 chr20 30527019 30527108 -41626774 - MER63 DNA MER1_type -312 748 658 304 299 69 52 chr20 30527190 30527364 -41626518 + MER5A DNA MER1_type 12 188 -1 534 204 190 7 chr20 30527804 30527946 -41625936 - MER5A DNA MER1_type -7 182 15 245 188 0 21 chr20 30528177 30528225 -41625657 - MLT1G LTR MaLR -97 458 412 273 306 35 12 chr20 30528339 30528424 -41625458 - MLT1G LTR MaLR -313 277 191 241 259 0 35 chr20 30528496 30528581 -41625301 - MLT1G LTR MaLR -488 105 24 22 0 0 0 chr20 30529259 30529281 -41624601 + AT_rich Low_complexity Low_complexity 1 22 0 210 128 0 0 chr20 30529406 30529445 -41624437 + (TG)n Simple_repeat Simple_repeat 2 40 0 507 281 89 38 chr20 30529566 30530286 -41623596 - L1MEd LINE L1 -4786 1524 700 354 296 47 71 chr20 30530319 30530539 -41623343 - HAL1b LINE L1 -740 608 397 2297 89 0 0 chr20 30530539 30530841 -41623041 - AluY SINE Alu -9 302 1 354 296 47 71 chr20 30530841 30530958 -41622924 - HAL1b LINE L1 -951 397 279 212 194 0 0 chr20 30531078 30531114 -41622768 + (TA)n Simple_repeat Simple_repeat 1 36 0 782 271 61 23 chr20 30531393 30531832 -41622050 - LTR50 LTR ERVL -13 782 380 * 833 246 195 11 chr20 30531818 30532274 -41621608 - LTR50 LTR ERVL -244 551 12 218 250 0 0 chr20 30533682 30533730 -41620152 + (TGAG)n Simple_repeat Simple_repeat 3 50 0 4565 175 24 13 chr20 30534082 30535117 -41618765 - L1MB7 LINE L1 -31 6869 5822 1251 96 5 81 chr20 30535128 30535337 -41618545 - L1PB1 LINE L1 -1 6150 5958 10591 137 65 8 chr20 30535343 30538992 -41614890 - L1MB7 LINE L1 -2738 4124 125 9220 241 55 13 chr20 30538977 30541823 -41612059 - L1M4 LINE L1 -1029 5117 2151 * 225 307 40 13 chr20 30541934 30542009 -41611873 + MIR SINE MIR 68 144 -64 539 229 85 45 chr20 30542760 30542929 -41610953 - Charlie2a DNA MER1_type -30 2832 2650 2223 100 3 0 chr20 30542929 30543238 -41610644 + AluSg SINE Alu 1 310 0 539 229 85 45 chr20 30543238 30543291 -41610591 - Charlie2a DNA MER1_type -212 2650 2601 1422 119 15 0 chr20 30543291 30543492 -41610390 + AluSg SINE Alu 21 224 -86 3411 240 94 83 chr20 30543497 30545643 -41608239 - Charlie2a DNA MER1_type -246 2616 447 3200 204 78 42 chr20 30547213 30547738 -41606144 - MER89-int LTR ERV1 -3053 3748 3176 1329 261 54 24 chr20 30547738 30548163 -41605719 + LTR47B LTR ERVL 2 439 -4 3200 204 78 42 chr20 30548163 30548527 -41605355 - MER89-int LTR ERV1 -3625 3176 2827 433 230 20 0 chr20 30548535 30548635 -41605247 - MER89-int LTR ERV1 -4153 2648 2547 6289 197 49 49 chr20 30548909 30550127 -41603755 - MER89-int LTR ERV1 -4232 2569 1349 1530 230 14 22 chr20 30550127 30550171 -41603711 - MLT2D LTR ERVL 0 414 371 315 0 0 0 chr20 30550171 30550206 -41603676 + (TG)n Simple_repeat Simple_repeat 1 35 0 1530 230 14 22 chr20 30550206 30550578 -41603304 - MLT2D LTR ERVL -43 371 1 6289 197 49 49 chr20 30550578 30550841 -41603041 - MER89-int LTR ERV1 -5451 1350 1088 576 267 71 35 chr20 30550843 30551154 -41602728 + L1ME3 LINE L1 5756 6077 -85 1811 127 8 80 chr20 30551785 30552156 -41601726 - MER4A LTR ERV1 0 664 261 598 147 0 11 chr20 30552160 30552255 -41601627 - MER4A LTR ERV1 -570 94 1 808 253 47 4 chr20 30553732 30554104 -41599778 + MER63 DNA MER1_type 4 1060 0 259 224 122 75 chr20 30555757 30555864 -41598018 + MER5A DNA MER1_type 78 189 0 328 132 88 29 chr20 30555868 30555936 -41597946 + L2 LINE L2 3186 3257 -56 290 221 145 23 chr20 30556061 30556192 -41597690 - MER117 DNA MER1_type -28 169 23 198 253 24 84 chr20 30556529 30556612 -41597270 - L2 LINE L2 -3 3269 3192 436 254 125 75 chr20 30557909 30558228 -41595654 + L1MC4 LINE L1 7538 7872 -170 415 244 125 24 chr20 30558292 30558421 -41595461 - L1MC4 LINE L1 -11 8031 7880 317 104 0 0 chr20 30558421 30558469 -41595413 + L1MA9 LINE L1 6265 6312 0 415 244 125 24 chr20 30558469 30558507 -41595375 - L1MC4 LINE L1 -162 7880 7847 265 210 16 16 chr20 30559018 30559080 -41594802 - L1P5 LINE L1 -268 5888 5827 1398 164 18 32 chr20 30559112 30559392 -41594490 + L1MA7 LINE L1 5876 6151 -140 351 113 0 0 chr20 30559392 30559445 -41594437 + (CA)n Simple_repeat Simple_repeat 1 53 0 267 150 90 70 chr20 30560555 30560655 -41593227 + LTR16C LTR ERVL 376 477 -14 438 279 71 74 chr20 30561343 30561680 -41592202 - LTR16C LTR ERVL 0 491 156 1643 194 28 22 chr20 30562020 30562376 -41591506 + MLT1A1 LTR MaLR 8 365 0 513 227 141 12 chr20 30562421 30562584 -41591298 + MER5A DNA MER1_type 6 189 0 384 354 43 34 chr20 30563300 30563628 -41590254 - L1MC/D LINE L1 -2143 5665 5335 484 335 124 28 chr20 30564275 30564494 -41589388 - L1MC/D LINE L1 -1537 4609 4413 1638 195 13 3 chr20 30564494 30564792 -41589090 - AluJb SINE Alu -11 301 1 484 335 124 28 chr20 30564792 30565008 -41588874 - L1MC/D LINE L1 -1733 4413 4132 636 227 67 0 chr20 30566874 30567024 -41586858 + MER5B DNA MER1_type 16 175 -3 326 261 43 43 chr20 30567111 30567226 -41586656 - MER5A DNA MER1_type -65 124 10 2250 79 0 4 chr20 30567625 30567903 -41585979 + AluY SINE Alu 33 309 -2 329 137 0 0 chr20 30567958 30568009 -41585873 + MER103 DNA DNA 45 95 -71 545 310 39 0 chr20 30568614 30568769 -41585113 + MER5A DNA MER1_type 29 189 0 322 241 234 0 chr20 30569168 30569309 -41584573 + MER5B DNA MER1_type 1 174 -4 535 233 110 8 chr20 30569624 30569860 -41584022 + MER76 LTR ERV 1 260 -428 282 294 28 28 chr20 30570811 30570920 -41582962 - MIR3 SINE MIR -93 115 7 289 307 88 18 chr20 30570944 30571058 -41582824 - L2 LINE L2 -19 3253 3132 1590 198 35 24 chr20 30571232 30571605 -41582277 + MLT1B LTR MaLR 1 377 -13 305 295 117 101 chr20 30572154 30572598 -41581284 + L1MEd LINE L1 693 1143 -4976 638 311 55 10 chr20 30572628 30572786 -41581096 + HAL1b LINE L1 292 441 -907 324 0 0 0 chr20 30572786 30572822 -41581060 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 638 311 55 10 chr20 30572822 30572972 -41580910 + HAL1b LINE L1 441 614 -734 294 73 0 0 chr20 30573415 30573456 -41580426 + (TAGA)n Simple_repeat Simple_repeat 2 42 0 1306 261 114 60 chr20 30573474 30574290 -41579592 + L1MC5 LINE L1 6651 7510 -451 1619 171 3 45 chr20 30574524 30574643 -41579239 + AluJo SINE Alu 27 149 -163 2262 120 0 3 chr20 30574643 30574942 -41578940 + AluSx SINE Alu 1 298 -14 1619 171 3 45 chr20 30574942 30575114 -41578768 + AluJo SINE Alu 149 306 -6 389 238 262 0 chr20 30575118 30575244 -41578638 - MER5A DNA MER1_type -27 162 4 206 62 31 0 chr20 30575386 30575418 -41578464 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 2224 94 0 4 chr20 30575422 30575698 -41578184 - AluSc SINE Alu -34 275 1 279 228 41 17 chr20 30576006 30576106 -41577776 - MLT1J LTR MaLR 0 595 450 788 237 57 47 chr20 30576436 30576737 -41577145 + MLT1A1 LTR MaLR 16 426 -41 486 262 159 0 chr20 30577000 30577145 -41576737 + MER5A DNA MER1_type 16 183 -6 267 313 36 0 chr20 30577168 30577280 -41576602 + L1MC5 LINE L1 7453 7568 -393 364 225 165 63 chr20 30577295 30577580 -41576302 + L1MC5 LINE L1 7616 7929 -32 185 208 62 0 chr20 30578534 30578582 -41575300 + MIR SINE MIR 106 156 -106 5239 170 31 8 chr20 30578595 30579497 -41574385 - MER49 LTR ERV1 0 923 1 673 170 0 44 chr20 30579671 30579806 -41574076 + L1MCa LINE L1 21 149 -6277 3118 119 53 2 chr20 30579806 30580292 -41573590 - LTR1 LTR ERV1 0 785 275 6648 189 62 43 chr20 30580292 30581519 -41572363 + L1MCa LINE L1 888 2090 -4336 2104 128 7 0 chr20 30581519 30581816 -41572066 + AluSg SINE Alu 1 299 -11 6648 189 62 43 chr20 30581816 30584070 -41569812 + L1MCa LINE L1 2090 4433 -1993 1085 163 0 16 chr20 30584070 30584254 -41569628 + FRAM SINE Alu 1 174 -2 1013 256 10 7 chr20 30584254 30584562 -41569320 + L1MCa LINE L1 4456 4764 -1662 754 158 60 0 chr20 30584562 30584695 -41569187 + L1MC1 LINE L1 6188 6328 -5 264 272 49 0 chr20 30585076 30585157 -41568725 + L2 LINE L2 3183 3267 -46 222 37 0 0 chr20 30585538 30585565 -41568317 + (TG)n Simple_repeat Simple_repeat 2 28 0 255 61 0 0 chr20 30588674 30588707 -41565175 + (CA)n Simple_repeat Simple_repeat 2 34 0 548 283 44 49 chr20 30590057 30590283 -41563599 - MLT1J LTR MaLR -200 311 87 238 325 12 0 chr20 30593168 30593248 -41560634 + (CACG)n Simple_repeat Simple_repeat 3 83 0 3638 174 26 19 chr20 30593648 30594368 -41559514 + L1MB2 LINE L1 5447 6171 0 687 234 128 20 chr20 30594428 30594887 -41558995 - MLT1G LTR MaLR -10 580 11 363 296 136 33 chr20 30595148 30595391 -41558491 + L1M4 LINE L1 5124 5391 -755 982 174 0 0 chr20 30595419 30595591 -41558291 - AluSg/x SINE Alu -4 308 137 191 333 87 0 chr20 30596931 30597000 -41556882 - L2 LINE L2 -5 3267 3193 864 253 26 32 chr20 30597521 30597889 -41555993 - MLT1G LTR MaLR -264 326 1 2717 114 70 5 chr20 30598026 30598455 -41555427 + MSTB2 LTR MaLR 1 457 0 274 192 0 0 chr20 30599590 30599642 -41554240 - MER5B DNA MER1_type -1 177 126 2192 110 0 7 chr20 30599870 30600180 -41553702 - AluSc SINE Alu -1 308 1 330 212 30 0 chr20 30600180 30600246 -41553636 - MER5A DNA MER1_type -113 76 9 204 158 0 0 chr20 30600846 30600884 -41552998 + (TATATG)n Simple_repeat Simple_repeat 4 41 0 291 323 46 0 chr20 30600990 30601120 -41552762 + MLT1H LTR MaLR 56 191 -358 304 273 123 19 chr20 30601167 30601321 -41552561 + MLT1H LTR MaLR 365 534 -15 258 271 0 0 chr20 30602388 30602495 -41551387 + (CA)n Simple_repeat Simple_repeat 1 107 0 241 290 0 0 chr20 30602507 30602576 -41551306 + (CA)n Simple_repeat Simple_repeat 2 70 0 390 278 0 0 chr20 30602589 30602769 -41551113 + (CA)n Simple_repeat Simple_repeat 1 180 0 410 283 14 0 chr20 30602780 30602918 -41550964 + (CA)n Simple_repeat Simple_repeat 2 141 0 353 306 109 5 chr20 30603712 30603905 -41549977 + MIR SINE MIR 28 240 -22 223 143 41 0 chr20 30605137 30605186 -41548696 + A-rich Low_complexity Low_complexity 4 54 0 266 284 0 19 chr20 30606581 30606736 -41547146 + (CA)n Simple_repeat Simple_repeat 2 153 0 298 224 106 12 chr20 30606820 30606905 -41546977 + L2 LINE L2 3197 3289 -24 23 0 0 0 chr20 30607367 30607390 -41546492 + GC_rich Low_complexity Low_complexity 1 23 0 2426 87 0 3 chr20 30609058 30609368 -41544514 - AluY SINE Alu -2 309 1 788 217 10 14 chr20 30609500 30609707 -41544175 - L1M4 LINE L1 -1550 4596 4391 322 323 78 42 chr20 30609722 30609939 -41543943 + MIR SINE MIR 11 235 -27 1939 157 6 6 chr20 30610367 30610724 -41543158 - AluSx SINE Alu 0 312 1 1876 204 49 158 chr20 30611343 30612204 -41541678 - L1MA10 LINE L1 -13 6321 5555 2135 98 7 14 chr20 30612240 30612548 -41541334 - AluSx SINE Alu 0 306 1 801 58 16 8 chr20 30613698 30613819 -41540063 + (TTTC)n Simple_repeat Simple_repeat 3 124 0 200 170 19 0 chr20 30614310 30614363 -41539519 + (TCTA)n Simple_repeat Simple_repeat 4 57 0 607 303 6 22 chr20 30614743 30614921 -41538961 + MIR SINE MIR 5 179 -83 827 274 124 27 chr20 30615101 30615473 -41538409 + LTR16C LTR ERVL 68 475 -16 208 330 136 0 chr20 30617015 30617118 -41536764 + L2 LINE L2 3156 3272 0 2339 76 3 0 chr20 30617180 30617481 -41536401 - AluY SINE Alu -9 302 1 349 350 127 0 chr20 30617911 30618194 -41535688 - L2 LINE L2 -420 2894 2576 180 246 101 43 chr20 30618433 30618571 -41535311 - L2 LINE L2 -1219 2095 1950 21 0 0 0 chr20 30618773 30618794 -41535088 + AT_rich Low_complexity Low_complexity 1 21 0 418 201 76 65 chr20 30620190 30620374 -41533508 - LTR16C LTR ERVL 0 491 306 2287 77 37 0 chr20 30621442 30621741 -41532141 - AluSx SINE Alu -2 310 1 209 161 0 0 chr20 30622420 30622451 -41531431 + (TG)n Simple_repeat Simple_repeat 2 32 0 409 293 116 53 chr20 30622772 30623017 -41530865 - L1MDa LINE L1 -760 1730 1502 2682 134 29 2 chr20 30623017 30623434 -41530448 + MSTA LTR MaLR 1 428 0 409 293 116 53 chr20 30623434 30623510 -41530372 - L1MDa LINE L1 -988 1502 1432 2089 123 0 0 chr20 30623510 30623818 -41530064 + AluSq SINE Alu 1 308 -5 409 293 116 53 chr20 30623818 30625011 -41528871 - L1MDa LINE L1 -1058 1432 43 231 288 260 14 chr20 30625041 30625187 -41528695 + MER102b DNA MER1_type 144 325 -16 414 0 0 0 chr20 30625332 30625378 -41528504 + (TA)n Simple_repeat Simple_repeat 2 47 0 24684 79 5 0 chr20 30625387 30628581 -41525301 + L1PA5 LINE L1 11 3220 -2926 9826 41 38 0 chr20 30628581 30630557 -41523325 + L1PA5 LINE L1 4160 6174 0 2301 64 0 14 chr20 30630558 30630853 -41523029 + AluY SINE Alu 2 292 -19 407 264 23 0 chr20 30630854 30630941 -41522941 - L1MC4 LINE L1 -1340 6702 6614 392 283 33 0 chr20 30630921 30631013 -41522869 + L1MC4 LINE L1 6614 6708 -1334 * 27 0 0 0 chr20 30631016 30631043 -41522839 + AT_rich Low_complexity Low_complexity 1 27 0 1842 98 0 4 chr20 30631043 30631298 -41522584 - AluY SINE Alu -26 285 32 355 270 97 51 chr20 30631331 30631527 -41522355 - MER90 LTR ERV1 -7 568 364 252 184 0 0 chr20 30632976 30633025 -41520857 + CT-rich Low_complexity Low_complexity 2 50 0 261 167 0 0 chr20 30633028 30633082 -41520800 + (CA)n Simple_repeat Simple_repeat 2 55 0 40 73 0 0 chr20 30633438 30633520 -41520362 + AT_rich Low_complexity Low_complexity 1 82 0 1904 129 10 0 chr20 30633637 30633932 -41519950 + AluSq SINE Alu 1 298 -15 2331 191 39 8 chr20 30634032 30634546 -41519336 - L1MB3 LINE L1 -2 6181 5652 369 157 0 0 chr20 30634549 30634600 -41519282 - AluJ/FRAM SINE Alu -20 282 232 620 255 25 0 chr20 30634601 30634758 -41519124 - L1MB3 LINE L1 -511 5669 5509 2021 113 0 7 chr20 30634846 30635139 -41518743 + AluSx SINE Alu 8 298 -14 1357 179 19 70 chr20 30635302 30635614 -41518268 - AluJo SINE Alu -16 296 1 2320 181 39 0 chr20 30635875 30636285 -41517597 - MSTB LTR MaLR 0 426 1 829 315 20 4 chr20 30636334 30636585 -41517297 + MIR SINE MIR 3 257 -5 2368 50 0 3 chr20 30637587 30637885 -41515997 + AluY SINE Alu 1 297 -14 1374 281 92 76 chr20 30638063 30638504 -41515378 - L1MEd LINE L1 -2929 3200 2767 2225 93 26 0 chr20 30638504 30638806 -41515076 - AluSx SINE Alu -1 311 2 1374 281 92 76 chr20 30638806 30639659 -41514223 - L1MEd LINE L1 -3362 2767 1896 307 252 17 61 chr20 30639748 30639863 -41514019 + L1MC4 LINE L1 6582 6691 -1351 361 298 43 60 chr20 30639912 30640657 -41513225 - L1MEd LINE L1 -837 1653 834 390 91 0 0 chr20 30640714 30640769 -41513113 + (TTTTC)n Simple_repeat Simple_repeat 4 58 0 741 204 74 11 chr20 30640959 30641135 -41512747 + MER5A DNA MER1_type 1 187 -2 364 310 76 83 chr20 30641439 30641599 -41512283 - L1MEd LINE L1 -5248 871 711 1231 213 47 89 chr20 30641599 30641980 -41511902 - MLT1A1 LTR MaLR 0 365 1 364 310 76 83 chr20 30641980 30642277 -41511605 - L1MEd LINE L1 -5408 711 417 268 153 14 28 chr20 30642527 30642599 -41511283 + (TGG)n Simple_repeat Simple_repeat 3 73 0 1437 224 56 0 chr20 30642617 30642939 -41510943 - MER58B DNA MER1_type -1 340 1 344 344 0 0 chr20 30642942 30643067 -41510815 + (TGG)n Simple_repeat Simple_repeat 3 127 0 561 231 0 0 chr20 30643087 30643260 -41510622 + (ATGGTG)n Simple_repeat Simple_repeat 1 173 0 2108 115 0 13 chr20 30644019 30644333 -41509549 - AluSx SINE Alu -2 310 1 1642 182 146 42 chr20 30645425 30645858 -41508024 + L1MB7 LINE L1 5707 6184 0 328 289 70 6 chr20 30646851 30647007 -41506875 - LTR16C LTR ERVL -188 303 138 1478 168 212 22 chr20 30647079 30647442 -41506440 - MSTB1 LTR MaLR 0 432 1 2423 128 87 17 chr20 30648705 30649120 -41504762 - MER65A LTR ERV1 0 445 2 286 226 89 57 chr20 30650476 30650600 -41503282 - L1MC5 LINE L1 -50 7911 7784 296 177 21 94 chr20 30651180 30651276 -41502606 - L1MC5 LINE L1 -166 7795 7707 7165 194 41 22 chr20 30651339 30652987 -41500895 - L1MB3 LINE L1 -26 6157 4442 1934 125 0 11 chr20 30652987 30653305 -41500577 - AluSx SINE Alu 0 315 1 7165 194 41 22 chr20 30653305 30654236 -41499646 - L1MB3 LINE L1 -1741 4442 3530 288 338 138 0 chr20 30654290 30654435 -41499447 - MIR3 SINE MIR -12 196 32 434 204 220 23 chr20 30655544 30655676 -41498206 - MER5A DNA MER1_type -6 183 26 751 194 34 53 chr20 30659531 30659737 -41494145 - MLT1H LTR MaLR 0 549 348 184 274 171 34 chr20 30661351 30661468 -41492414 - MIR3 SINE MIR -62 146 14 284 303 22 34 chr20 30661697 30661875 -41492007 + HAL1 LINE L1 814 989 -1518 569 236 67 24 chr20 30661925 30662133 -41491749 - L1M4 LINE L1 -1981 4976 4760 3885 136 18 37 chr20 30662150 30662654 -41491228 - L1MA5A LINE L1 0 6297 5802 3738 188 92 5 chr20 30662654 30663414 -41490468 - LTR1B LTR ERV1 0 826 1 3885 136 18 37 chr20 30663414 30663640 -41490242 - L1MA5A LINE L1 -495 5802 5573 3086 259 66 32 chr20 30663696 30663736 -41490146 - L1M4 LINE L1 -2259 4698 4661 2469 37 0 7 chr20 30663736 30664033 -41489849 - AluY SINE Alu -16 295 1 3086 259 66 32 chr20 30664033 30665427 -41488455 - L1M4 LINE L1 -2296 4661 3215 614 128 32 0 chr20 30665435 30665529 -41488353 - LOR1a LTR ERV1 0 497 401 39493 37 4 2 chr20 30665537 30671094 -41482788 - L1PA3 LINE L1 -7 6463 893 626 140 0 0 chr20 30671061 30671154 -41482728 - L1PA3 LINE L1 -6365 96 4 * 2014 182 39 0 chr20 30671159 30671522 -41482360 - LOR1b LTR ERV1 -84 377 1 723 261 117 37 chr20 30671522 30672165 -41481717 - L1M4 LINE L1 -3750 3207 2565 * 1902 167 85 38 chr20 30672159 30672601 -41481281 + L1MA4A LINE L1 5570 6063 -111 734 232 0 11 chr20 30672502 30672679 -41481203 + L1PB4 LINE L1 5980 6154 -2 * 1515 252 71 92 chr20 30672775 30673287 -41480595 - L1M4 LINE L1 -4568 2391 1870 1590 88 22 9 chr20 30673287 30673514 -41480368 - AluSg/x SINE Alu -2 310 81 1515 252 71 92 chr20 30673514 30674216 -41479666 - L1M4 LINE L1 -5089 1870 1188 333 290 43 43 chr20 30674286 30674448 -41479434 - L1M4 LINE L1 -5667 1188 1027 284 279 107 25 chr20 30674771 30674968 -41478914 - L1M4 LINE L1 -6635 224 12 365 261 140 71 chr20 30675389 30675711 -41478171 + MARNA DNA Mariner 202 545 -41 3094 139 8 33 chr20 30676494 30676831 -41477051 + LOR1a LTR ERV1 1 322 -175 1515 190 14 20 chr20 30676831 30677126 -41476756 - AluJb SINE Alu -18 294 2 3094 139 8 33 chr20 30677126 30677298 -41476584 + LOR1a LTR ERV1 322 497 0 301 302 47 31 chr20 30678959 30679151 -41474731 + L2 LINE L2 2836 3030 -283 298 259 149 58 chr20 30679206 30679380 -41474502 - LTR16A1 LTR ERVL 0 457 268 187 242 330 0 chr20 30679989 30680080 -41473802 - MER5A DNA MER1_type -9 180 60 1789 153 88 16 chr20 30680279 30680599 -41473283 - MER61A LTR ERV1 0 343 1 2169 110 0 22 chr20 30681075 30681394 -41472488 + AluSx SINE Alu 1 312 0 213 298 214 0 chr20 30682730 30682814 -41471068 - MIR SINE MIR -159 103 2 286 270 25 125 chr20 30682960 30683160 -41470722 + L1MC4 LINE L1 7836 8015 -27 3214 223 79 34 chr20 30683382 30684630 -41469252 + L1MD2 LINE L1 4995 6303 -56 263 83 0 0 chr20 30684600 30684636 -41469246 + L1MC3 LINE L1 7701 7736 -49 * 278 155 35 0 chr20 30684638 30684696 -41469186 + L1MD3 LINE L1 7918 7977 -18 293 224 35 0 chr20 30684698 30684783 -41469099 + (TA)n Simple_repeat Simple_repeat 2 89 0 2561 149 12 21 chr20 30685035 30685465 -41468417 + LOR1b LTR ERV1 34 459 -2 536 253 96 27 chr20 30685928 30686113 -41467769 + L1MD2 LINE L1 5841 6034 -132 315 245 56 1 chr20 30687303 30687407 -41466475 + LTR16C LTR ERVL 346 475 -2 1755 143 0 38 chr20 30687419 30687753 -41466129 + AluSx SINE Alu 1 323 0 691 266 98 48 chr20 30691260 30691388 -41462494 - L2 LINE L2 -2 3311 3191 2206 98 3 0 chr20 30691388 30691693 -41462189 + AluSx SINE Alu 5 310 -2 691 266 98 48 chr20 30691693 30691982 -41461900 - L2 LINE L2 -122 3191 2873 4200 147 12 18 chr20 30692024 30692745 -41461137 - LTR62 LTR ERVK -2 717 1 421 304 72 6 chr20 30692750 30692931 -41460951 + MER3 DNA MER1_type 1 193 -16 1730 157 7 0 chr20 30693622 30693928 -41459954 - AluSx SINE Alu 0 312 5 228 252 65 44 chr20 30694406 30694508 -41459374 + MIR SINE MIR 51 153 -67 209 117 67 100 chr20 30696939 30696999 -41456883 - MER5B DNA MER1_type 0 178 121 1436 169 18 11 chr20 30697001 30697274 -41456608 + L1PA13 LINE L1 5889 6163 0 430 258 42 0 chr20 30701698 30701818 -41452064 + MER5A DNA MER1_type 47 171 -18 345 317 24 8 chr20 30702431 30702554 -41451328 - MIR SINE MIR -66 196 72 318 272 105 18 chr20 30703126 30703240 -41450642 - L2 LINE L2 0 3313 3190 25 31 0 0 chr20 30703492 30703524 -41450358 + GC_rich Low_complexity Low_complexity 1 32 0 384 226 117 7 chr20 30704202 30704303 -41449579 + L1ME3A LINE L1 6009 6132 -32 261 0 0 0 chr20 30704303 30704332 -41449550 + (TG)n Simple_repeat Simple_repeat 1 29 0 384 226 117 7 chr20 30704332 30704367 -41449515 + L1ME3A LINE L1 6132 6162 -2 1036 170 87 26 chr20 30704386 30704616 -41449266 + AluJo SINE Alu 38 281 -31 475 279 39 73 chr20 30704630 30704863 -41449019 - L2 LINE L2 -1484 1830 1606 192 250 92 0 chr20 30704945 30705021 -41448861 - MIR SINE MIR -125 137 55 21 0 0 0 chr20 30705829 30705850 -41448032 + AT_rich Low_complexity Low_complexity 1 21 0 1589 167 7 4 chr20 30705850 30706126 -41447756 - AluJo SINE Alu -25 287 11 11282 201 37 4 chr20 30706293 30709504 -41444378 - L1PA15 LINE L1 -17 6148 2827 1967 138 0 0 chr20 30709605 30709902 -41443980 - AluSx SINE Alu -15 297 1 368 284 0 0 chr20 30711467 30711555 -41442327 - MIR SINE MIR -50 212 125 253 302 76 58 chr20 30711617 30711789 -41442093 - MIR SINE MIR -31 231 57 4749 160 26 11 chr20 30712027 30713279 -41440603 + L1MA4A LINE L1 4955 6282 -21 2319 110 0 25 chr20 30713821 30714138 -41439744 - AluSq SINE Alu -4 309 1 1197 277 84 7 chr20 30714260 30714809 -41439073 - L1MDa LINE L1 -2191 4349 3759 348 315 20 5 chr20 30714961 30715164 -41438718 - L1MDa LINE L1 -4466 2074 1869 22 35 0 0 chr20 30715199 30715228 -41438654 + AT_rich Low_complexity Low_complexity 1 29 0 313 256 75 15 chr20 30715321 30715454 -41438428 - L1MDa LINE L1 -5269 1261 1121 249 270 16 16 chr20 30716640 30716703 -41437179 - LTR16C LTR ERVL -286 205 143 4381 113 13 6 chr20 30717453 30718084 -41435798 + MER41B LTR ERV1 1 635 0 2291 118 0 3 chr20 30720301 30720614 -41433268 + AluSx SINE Alu 1 312 0 2167 89 32 0 chr20 30721417 30721698 -41432184 - AluSx SINE Alu -18 294 5 2999 183 8 6 chr20 30726064 30726583 -41427299 - ERVL LTR ERVL -3952 1812 1293 643 319 39 4 chr20 30727167 30727396 -41426486 + LTR16C LTR ERVL 255 491 0 2089 200 126 12 chr20 30728620 30729119 -41424763 + L1MC3 LINE L1 6176 6731 -1054 794 246 44 79 chr20 30729162 30729479 -41424403 + MLT1D LTR MaLR 34 339 -166 1030 133 13 286 chr20 30729479 30729759 -41424123 + L1MC3 LINE L1 7283 7276 -509 965 103 23 0 chr20 30729759 30729934 -41423948 + (CA)n Simple_repeat Simple_repeat 1 179 0 1030 133 13 286 chr20 30729934 30730324 -41423558 + L1MC3 LINE L1 7275 7770 -15 3514 146 59 42 chr20 30730328 30730854 -41423028 - L1MA6 LINE L1 -329 5971 5413 1395 167 4 4 chr20 30730854 30731124 -41422758 - L1MA4 LINE L1 -4 6296 6027 3514 146 59 42 chr20 30731124 30731346 -41422536 - L1MA6 LINE L1 -887 5413 5196 1993 146 3 6 chr20 30731347 30731670 -41422212 + L1MA6 LINE L1 5979 6300 0 24 0 0 0 chr20 30733226 30733250 -41420632 + AT_rich Low_complexity Low_complexity 1 24 0 1474 160 71 8 chr20 30733268 30733536 -41420346 + AluJo SINE Alu 12 296 -16 183 356 62 6 chr20 30733549 30733709 -41420173 - MIR SINE MIR -12 250 82 951 280 84 27 chr20 30734146 30734774 -41419108 + L2 LINE L2 2342 3005 -308 365 328 51 6 chr20 30735421 30735598 -41418284 + L2 LINE L2 3114 3298 -15 829 272 129 50 chr20 30735778 30736277 -41417605 - MLT1G3 LTR MaLR 0 595 67 1413 194 31 10 chr20 30736283 30736577 -41417305 + L1MC3 LINE L1 7485 7784 -1 274 254 0 0 chr20 30736582 30736645 -41417237 - MLT1G3 LTR MaLR -532 63 1 686 242 240 28 chr20 30737133 30737591 -41416291 + MLT1H1 LTR MaLR 1 555 0 1974 123 0 0 chr20 30737856 30738132 -41415750 - AluSx SINE Alu -7 305 30 1949 151 0 25 chr20 30738348 30738665 -41415217 - AluJb SINE Alu -3 309 1 7766 160 17 3 chr20 30738822 30741068 -41412814 + L1PA13 LINE L1 3929 6156 -7 24 53 0 0 chr20 30741086 30741124 -41412758 + AT_rich Low_complexity Low_complexity 1 38 0 229 362 82 45 chr20 30741311 30741554 -41412328 - L2 LINE L2 -72 3200 2949 759 226 11 117 chr20 30741698 30741931 -41411951 + MER33 DNA MER1_type 4 187 -2398 1664 160 64 3 chr20 30741931 30742213 -41411669 + AluJb SINE Alu 4 302 -10 759 226 11 117 chr20 30742213 30742337 -41411545 + MER33 DNA MER1_type 187 323 -1 2023 136 7 7 chr20 30742832 30743141 -41410741 - AluSx SINE Alu -3 309 1 2609 59 0 0 chr20 30743626 30743932 -41409950 + AluY SINE Alu 1 306 -5 2064 105 3 40 chr20 30743935 30744257 -41409625 + AluSq SINE Alu 1 311 0 280 264 109 9 chr20 30744294 30744404 -41409478 - MIR SINE MIR -64 198 78 1312 260 39 39 chr20 30745195 30745583 -41408299 + MSTD LTR MaLR 1 388 -8 265 100 0 25 chr20 30745592 30745632 -41408250 + MSTD-int LTR MaLR 5 43 -1328 256 224 13 13 chr20 30745642 30745718 -41408164 + L1MA7 LINE L1 6214 6289 -2 415 330 43 54 chr20 30747730 30748126 -41405756 - L1M4 LINE L1 -1808 4338 3946 297 0 0 0 chr20 30748126 30748159 -41405723 + (CA)n Simple_repeat Simple_repeat 2 34 0 415 330 43 54 chr20 30748159 30748228 -41405654 - L1M4 LINE L1 -2200 3946 3878 1240 157 72 110 chr20 30748274 30748593 -41405289 - AluJb SINE Alu -5 307 1 269 273 0 0 chr20 30749110 30749187 -41404695 - L1M4 LINE L1 -3132 3014 2938 1512 183 21 21 chr20 30749214 30749504 -41404378 - AluJb SINE Alu -22 290 1 3928 168 50 28 chr20 30752386 30753131 -41400751 - LTR39 LTR ERV1 -22 761 1 469 290 102 29 chr20 30753453 30753698 -41400184 - L1ME1 LINE L1 -5 6161 5899 1495 232 24 42 chr20 30753706 30754116 -41399766 - L1ME1 LINE L1 -317 5847 5445 201 333 26 48 chr20 30754331 30754562 -41399320 - L2 LINE L2 -181 3091 2866 193 239 0 0 chr20 30754676 30754722 -41399160 + L2 LINE L2 3268 3313 0 184 296 185 19 chr20 30755091 30755199 -41398683 - L2 LINE L2 -5 3267 3142 2131 150 18 0 chr20 30755222 30755562 -41398320 + L1PA16 LINE L1 5812 6157 -9 590 39 0 13 chr20 30755569 30755647 -41398235 + (GGAAA)n Simple_repeat Simple_repeat 3 79 0 744 284 37 21 chr20 30756069 30756459 -41397423 - MLT1H1 LTR MaLR 0 555 115 416 270 77 40 chr20 30756883 30757105 -41396777 - L1ME3 LINE L1 -149 6013 5784 732 344 50 3 chr20 30757285 30757648 -41396234 + LTR16C LTR ERVL 106 485 -6 252 0 0 0 chr20 30757792 30757820 -41396062 + (TG)n Simple_repeat Simple_repeat 2 29 0 2099 119 7 23 chr20 30758471 30758773 -41395109 + AluSx SINE Alu 2 298 -14 1141 276 141 34 chr20 30758774 30759432 -41394450 + L1ME3A LINE L1 5276 6006 -164 236 218 0 39 chr20 30759844 30759922 -41393960 - L1ME3 LINE L1 -965 5181 5107 317 273 53 8 chr20 30764272 30764404 -41389478 + MIR SINE MIR 5 142 -120 1384 198 101 28 chr20 30764509 30764945 -41388937 - Charlie1 DNA MER1_type -24 2737 3 1229 262 146 8 chr20 30766777 30767262 -41386620 - MER69 DNA AcHobo -8 2518 1967 3052 157 31 15 chr20 30768219 30768742 -41385140 - LTR26B LTR ERV1 0 531 1 310 195 0 49 chr20 30768808 30768890 -41384992 + L1ME1 LINE L1 5785 5862 -304 847 273 50 8 chr20 30768899 30769159 -41384723 - L1M4b LINE L1 -6577 282 12 225 303 147 0 chr20 30769647 30769756 -41384126 - L1ME3 LINE L1 -2313 3833 3709 382 325 60 8 chr20 30769823 30770072 -41383810 - L1ME3 LINE L1 -3506 2640 2379 926 208 43 31 chr20 30770959 30771214 -41382668 + L1MC4a LINE L1 7152 7409 -399 1609 274 54 53 chr20 30771347 30772150 -41381732 - L1ME3 LINE L1 -98 6064 5254 197 193 0 18 chr20 30772161 30772218 -41381664 + (TA)n Simple_repeat Simple_repeat 2 57 0 228 246 0 16 chr20 30772223 30772284 -41381598 + (TATATG)n Simple_repeat Simple_repeat 3 62 0 450 276 0 0 chr20 30772289 30772463 -41381419 + (TATG)n Simple_repeat Simple_repeat 2 175 0 433 261 4 19 chr20 30772465 30772536 -41381346 + (TATATG)n Simple_repeat Simple_repeat 1 72 -540 2786 90 0 0 chr20 30772536 30772891 -41380991 + THE1A LTR MaLR 1 355 0 433 261 4 19 chr20 30772891 30773087 -41380795 + (TATATG)n Simple_repeat Simple_repeat 72 612 0 357 241 0 43 chr20 30773107 30773223 -41380659 + (TATATG)n Simple_repeat Simple_repeat 2 112 0 499 243 0 11 chr20 30773224 30773405 -41380477 + (TG)n Simple_repeat Simple_repeat 2 180 0 499 247 0 11 chr20 30773439 30773621 -41380261 + (TG)n Simple_repeat Simple_repeat 1 180 0 2878 125 3 1 chr20 30774906 30775457 -41378425 + L1M1 LINE L1 5109 5659 -646 401 300 78 28 chr20 30775514 30775694 -41378188 + LTR33 LTR ERVL 11 199 -322 622 218 0 0 chr20 30778480 30778590 -41375292 - FLAM_C SINE Alu -32 111 2 298 314 151 21 chr20 30779781 30780166 -41373716 - L2 LINE L2 -1078 2236 1802 287 65 22 0 chr20 30780266 30780312 -41373570 + (TG)n Simple_repeat Simple_repeat 1 47 0 1691 188 93 14 chr20 30781281 30781648 -41372234 + MSTD LTR MaLR 1 396 0 242 292 49 42 chr20 30782211 30782355 -41371527 - MER5A DNA MER1_type -38 151 7 218 303 114 0 chr20 30782481 30782613 -41371269 + MIR SINE MIR 110 256 -6 186 43 0 0 chr20 30782786 30782809 -41371073 + (TAAAA)n Simple_repeat Simple_repeat 3 25 0 268 331 48 0 chr20 30783679 30783824 -41370058 + MER5B DNA MER1_type 13 164 -14 283 225 99 18 chr20 30783842 30783953 -41369929 + MER5B DNA MER1_type 6 125 -53 338 214 87 95 chr20 30784014 30784140 -41369742 - MER63 DNA MER1_type -311 751 1 359 301 115 19 chr20 30785003 30785212 -41368670 + MIR SINE MIR 14 242 -20 267 146 0 0 chr20 30785502 30785543 -41368339 + LTR33 LTR ERVL 104 144 -377 34 0 0 0 chr20 30785905 30785939 -41367943 + AT_rich Low_complexity Low_complexity 1 34 0 376 267 25 17 chr20 30788538 30788658 -41365224 + GA-rich Low_complexity Low_complexity 1 121 0 210 320 0 0 chr20 30789335 30789410 -41364472 + MIR SINE MIR 152 226 -36 27989 61 5 5 chr20 30791366 30795760 -41358122 - HAL1b LINE L1 -8 6146 390 322 243 28 133 chr20 30796555 30796917 -41356965 - L1M4 LINE L1 -1455 4691 4368 309 68 0 0 chr20 30797465 30797509 -41356373 + (TG)n Simple_repeat Simple_repeat 2 45 0 5398 199 66 25 chr20 30797812 30799960 -41353922 - L1MB7 LINE L1 -9 6175 3943 1933 131 55 7 chr20 30800045 30800335 -41353547 - AluSx SINE Alu 0 312 9 22 35 0 0 chr20 30800492 30800521 -41353361 + AT_rich Low_complexity Low_complexity 1 29 0 198 208 0 0 chr20 30801694 30801747 -41352135 + GA-rich Low_complexity Low_complexity 1 53 0 368 261 18 9 chr20 30802666 30802777 -41351105 + MIR SINE MIR 30 141 -67 256 188 0 0 chr20 30803886 30803934 -41349948 - MLT1H LTR MaLR 0 549 502 1515 97 0 5 chr20 30803934 30804129 -41349753 + AluSc SINE Alu 96 289 -20 668 257 171 32 chr20 30805019 30805365 -41348517 - LTR16C LTR ERVL -2 489 96 1487 190 7 7 chr20 30805465 30805770 -41348112 + L1MB5 LINE L1 5851 6155 -19 602 265 18 0 chr20 30807261 30807431 -41346451 - MER5B DNA MER1_type -2 176 4 309 297 51 0 chr20 30807646 30807764 -41346118 + MIR SINE MIR 30 153 -55 955 169 0 13 chr20 30808273 30808427 -41345455 + FRAM SINE Alu 1 151 -25 22 35 0 0 chr20 30808434 30808463 -41345419 + AT_rich Low_complexity Low_complexity 1 29 0 422 314 53 14 chr20 30808507 30808714 -41345168 + MIR SINE MIR 15 229 -33 6620 123 17 29 chr20 30809909 30810993 -41342889 + MER11C LTR ERVK 1 1071 0 649 266 173 20 chr20 30811520 30811914 -41341968 + LTR16A1 LTR ERVL 3 456 -1 1609 198 43 6 chr20 30812927 30813255 -41340627 - MER58B DNA MER1_type 0 341 2 323 224 30 82 chr20 30813336 30813470 -41340412 + L1ME4a LINE L1 5973 6099 -22 25 0 0 0 chr20 30813473 30813498 -41340384 + AT_rich Low_complexity Low_complexity 1 25 0 309 270 128 96 chr20 30814487 30814832 -41339050 - L2 LINE L2 -2 3270 2915 26 30 0 0 chr20 30816290 30816323 -41337559 + AT_rich Low_complexity Low_complexity 1 33 0 372 209 0 0 chr20 30816428 30816519 -41337363 + CT-rich Low_complexity Low_complexity 3 93 0 207 293 17 17 chr20 30816623 30816681 -41337201 - L2 LINE L2 -28 3285 3228 4453 179 31 7 chr20 30817000 30817880 -41336002 - MER54A LTR ERVL 0 901 1 1224 181 0 22 chr20 30817961 30818193 -41335689 + AluJo SINE Alu 37 263 -49 989 168 0 59 chr20 30818998 30819201 -41334681 + AluJb SINE Alu 122 312 0 1287 130 51 24 chr20 30819260 30819514 -41334368 - L1MA8 LINE L1 -4 6287 6027 26 64 0 0 chr20 30819832 30819879 -41334003 + AT_rich Low_complexity Low_complexity 1 47 0 318 241 35 26 chr20 30820107 30820223 -41333659 - MLT1J2 LTR MaLR -242 208 92 873 170 44 10 chr20 30820223 30820429 -41333453 + L1MC/D LINE L1 5306 5518 -815 1834 151 84 53 chr20 30820498 30820914 -41332968 + MSTB1 LTR MaLR 4 432 0 312 239 15 15 chr20 30820938 30821005 -41332877 - L2 LINE L2 -4 3268 3202 226 315 33 11 chr20 30821000 30821092 -41332790 - MIR SINE MIR -103 159 66 * 306 270 31 31 chr20 30822089 30822248 -41331634 + L1MEc LINE L1 707 865 -5531 1670 168 78 32 chr20 30822255 30822625 -41331257 + L1ME LINE L1 631 1017 -5409 3378 150 43 15 chr20 30822626 30823232 -41330650 + L1MC1 LINE L1 5700 6322 -11 332 254 75 29 chr20 30823292 30823465 -41330417 + L1ME LINE L1 1047 1227 -5189 1110 303 94 26 chr20 30823476 30824361 -41329521 + L1ME LINE L1 1193 2295 -4312 255 244 32 16 chr20 30824509 30824632 -41329250 + (TA)n Simple_repeat Simple_repeat 1 125 0 794 110 87 0 chr20 30824737 30824864 -41329018 + MER85 DNA T2_type 2 139 0 296 143 12 48 chr20 30824891 30824975 -41328907 + HAL1 LINE L1 981 1061 -1446 776 343 62 63 chr20 30827405 30828105 -41325777 + L1ME LINE L1 4502 5201 -1225 1353 242 104 13 chr20 30828105 30828568 -41325314 + MLT1D LTR MaLR 1 505 0 776 343 62 63 chr20 30828568 30828665 -41325217 + L1ME LINE L1 5201 5297 -1129 198 0 0 0 chr20 30828665 30828687 -41325195 + (CA)n Simple_repeat Simple_repeat 2 23 0 776 343 62 63 chr20 30828687 30829059 -41324823 + L1ME LINE L1 5297 5671 -755 2262 78 0 13 chr20 30829643 30829950 -41323932 - AluY SINE Alu -8 303 1 228 286 19 38 chr20 30830134 30830239 -41323643 + L1ME LINE L1 5957 6059 -342 297 0 0 0 chr20 30830268 30830301 -41323581 + (TG)n Simple_repeat Simple_repeat 1 33 0 249 108 0 0 chr20 30830357 30830394 -41323488 + (TG)n Simple_repeat Simple_repeat 1 37 0 321 26 0 0 chr20 30830454 30830492 -41323390 + (TG)n Simple_repeat Simple_repeat 1 38 0 302 331 261 0 chr20 30830941 30831083 -41322799 + MIR SINE MIR 49 227 -35 1076 224 0 14 chr20 30831128 30831338 -41322544 + MER58A DNA MER1_type 3 209 -15 360 274 131 29 chr20 30831650 30831825 -41322057 - MLT1L LTR MaLR -2 613 421 240 287 30 40 chr20 30831987 30832088 -41321794 - MLT1J LTR MaLR -310 201 102 207 100 0 0 chr20 30832091 30832121 -41321761 + (CTTG)n Simple_repeat Simple_repeat 2 31 0 274 235 88 0 chr20 30834450 30834518 -41319364 - L2 LINE L2 -1 3271 3198 752 271 188 25 chr20 30834569 30834995 -41318887 - MLT1G1 LTR MaLR 0 595 34 266 279 29 58 chr20 30834971 30835075 -41318807 - MLT1G1 LTR MaLR -494 101 1 * 231 307 211 18 chr20 30835630 30835744 -41318138 - MIR SINE MIR -78 184 49 185 389 56 6 chr20 30836952 30837114 -41316768 + MIR SINE MIR 34 203 -59 1480 247 133 22 chr20 30837684 30838239 -41315643 - MLT1E3 LTR MaLR -7 617 1 3549 162 119 8 chr20 30838973 30839677 -41314205 - LTR39 LTR ERV1 0 783 2 1262 173 85 74 chr20 30842567 30843108 -41310774 - LTR36 LTR ERV1 -4 607 1 4332 191 42 12 chr20 30843732 30844665 -41309217 - L1MB3 LINE L1 -2 6181 5223 2004 117 0 0 chr20 30844710 30844991 -41308891 - AluSx SINE Alu -31 281 1 649 254 0 23 chr20 30844991 30845168 -41308714 - L1MB3 LINE L1 -878 5268 5096 187 347 59 36 chr20 30846162 30846384 -41307498 - L3 LINE CR1 -765 812 586 412 238 9 0 chr20 30846418 30846639 -41307243 + (CA)n Simple_repeat Simple_repeat 1 223 0 648 325 122 44 chr20 30847153 30848346 -41305536 + L2 LINE L2 2013 3311 -2 585 191 10 126 chr20 30848384 30848583 -41305299 - MER5B DNA MER1_type -2 176 1 979 245 138 11 chr20 30848662 30849038 -41304844 - MER110 LTR ERV1 -67 424 1 183 310 159 35 chr20 30850104 30850217 -41303665 + L2 LINE L2 3141 3267 -5 198 0 0 0 chr20 30850606 30850628 -41303254 + (TTTTTA)n Simple_repeat Simple_repeat 2 23 0 191 273 57 85 chr20 30851065 30851170 -41302712 - MIR SINE MIR -57 205 99 342 0 0 0 chr20 30851170 30851208 -41302674 + (TC)n Simple_repeat Simple_repeat 1 38 0 216 0 0 0 chr20 30851207 30851231 -41302651 + (CA)n Simple_repeat Simple_repeat 1 24 0 * 191 273 57 85 chr20 30851208 30851301 -41302581 - MIR SINE MIR -163 99 35 430 277 59 70 chr20 30851497 30851768 -41302114 - LTR16A1 LTR ERVL 0 457 190 206 336 48 62 chr20 30852081 30852227 -41301655 + L3b LINE CR1 1146 1289 -294 731 210 22 0 chr20 30855244 30855382 -41298500 + FLAM_C SINE Alu 2 142 -1 758 169 0 0 chr20 30855402 30855520 -41298362 - FLAM_A SINE Alu -13 129 12 1142 204 83 45 chr20 30855556 30855869 -41298013 + MLT1A2 LTR MaLR 1 325 -49 267 343 56 28 chr20 30859586 30859729 -41294153 - MIR SINE MIR -114 148 2 765 213 101 62 chr20 30860558 30861048 -41292834 + MLT1H LTR MaLR 3 549 0 312 235 17 96 chr20 30861158 30861273 -41292609 + MIR3 SINE MIR 88 193 -15 1619 161 36 4 chr20 30861829 30862108 -41291774 + AluJb SINE Alu 1 288 -24 533 49 0 37 chr20 30862108 30862189 -41291693 + L1PA11 LINE L1 6097 6174 0 315 0 0 0 chr20 30862644 30862679 -41291203 + (TG)n Simple_repeat Simple_repeat 2 36 0 576 54 0 0 chr20 30862703 30862777 -41291105 - Alu SINE Alu -4 306 233 220 340 109 20 chr20 30862886 30863033 -41290849 + MIR SINE MIR 13 172 -90 25 83 0 0 chr20 30864382 30864442 -41289440 + GC_rich Low_complexity Low_complexity 1 60 0 241 265 0 20 chr20 30864443 30864541 -41289341 + G-rich Low_complexity Low_complexity 3 98 0 24 32 0 0 chr20 30864640 30864671 -41289211 + GC_rich Low_complexity Low_complexity 1 31 0 180 111 0 0 chr20 30866475 30866502 -41287380 + (A)n Simple_repeat Simple_repeat 1 27 0 540 171 51 0 chr20 30866691 30866808 -41287074 + L1MA7 LINE L1 6158 6280 -11 249 322 25 25 chr20 30868757 30868852 -41285030 - MIR SINE MIR -78 130 33 2058 128 0 0 chr20 30870736 30871033 -41282849 - AluSx SINE Alu -15 297 1 2199 92 0 10 chr20 30871258 30871572 -41282310 + AluY SINE Alu 1 311 0 252 59 0 0 chr20 30875902 30875936 -41277946 + (TG)n Simple_repeat Simple_repeat 2 35 0 248 370 78 7 chr20 30876245 30876399 -41277483 + MIR3 SINE MIR 30 194 -14 3793 203 45 16 chr20 30876933 30878108 -41275774 - L1MB8 LINE L1 0 6989 5788 * 3955 242 37 15 chr20 30878099 30879547 -41274335 - L1MB8 LINE L1 -5344 1515 11 266 256 162 34 chr20 30880200 30880317 -41273565 + MIR3 SINE MIR 12 143 -65 548 194 32 8 chr20 30881476 30881600 -41272282 - L1MA4A LINE L1 -10 6293 6167 341 261 140 25 chr20 30881610 30881767 -41272115 - MIR SINE MIR -74 188 14 370 270 61 71 chr20 30881894 30882090 -41271792 + MIR SINE MIR 69 262 0 210 91 0 0 chr20 30882805 30882838 -41271044 + (GA)n Simple_repeat Simple_repeat 2 34 0 228 341 55 75 chr20 30883347 30883684 -41270198 + L2 LINE L2 2741 3075 -238 354 224 0 0 chr20 30884141 30884226 -41269656 + CT-rich Low_complexity Low_complexity 2 86 0 4069 208 41 26 chr20 30884231 30885973 -41267909 - L1MC3 LINE L1 -743 5403 4457 243 304 7 82 chr20 30886868 30887003 -41266879 - L2 LINE L2 -205 3067 2943 4547 109 9 3 chr20 30887043 30887674 -41266208 + MER41B LTR ERV1 1 635 0 265 281 10 73 chr20 30889230 30889326 -41264556 - L2 LINE L2 0 3272 3183 238 367 144 16 chr20 30889529 30889842 -41264040 - L2 LINE L2 -412 2902 2550 360 155 0 0 chr20 30889862 30889933 -41263949 + G-rich Low_complexity Low_complexity 2 72 0 239 326 39 31 chr20 30892892 30893021 -41260861 + MIR SINE MIR 17 146 -62 654 238 21 0 chr20 30893068 30893211 -41260671 - MIR SINE MIR -20 242 97 717 195 8 0 chr20 30893314 30893442 -41260440 + FLAM_C SINE Alu 2 130 -3 1549 247 93 92 chr20 30893520 30894098 -41259784 - MLT1H1 LTR MaLR -4 591 13 1428 161 218 0 chr20 30894138 30894436 -41259446 - MER47A DNA MER2_type 0 366 4 290 244 67 0 chr20 30894438 30894528 -41259354 + MER112 DNA MER1_type 133 228 -32 415 195 34 31 chr20 30894591 30894769 -41259113 - L1MA9 LINE L1 -4 6287 5994 1335 167 6 74 chr20 30896671 30896983 -41256899 + AluJo SINE Alu 3 293 -19 775 306 74 16 chr20 30897065 30897388 -41256494 - LTR16C LTR ERVL 0 491 150 1240 231 104 78 chr20 30898276 30898748 -41255134 - MLT1H LTR MaLR 0 549 66 616 198 17 0 chr20 30898775 30898891 -41254991 + MLT1H LTR MaLR 431 548 -1 715 307 109 25 chr20 30898893 30899297 -41254585 - LTR16C LTR ERVL 0 491 54 406 320 38 55 chr20 30899435 30899726 -41254156 - L3b LINE CR1 -187 1396 1111 324 317 62 29 chr20 30900226 30900434 -41253448 + L3 LINE CR1 1188 1402 -175 267 367 61 22 chr20 30900597 30900777 -41253105 + MIR3 SINE MIR 3 189 -19 214 307 61 35 chr20 30901240 30901354 -41252528 + MIR3 SINE MIR 11 127 -81 1233 191 72 0 chr20 30901725 30902020 -41251862 - AluJo SINE Alu 0 314 1 258 321 40 18 chr20 30903260 30903484 -41250398 - L1ME LINE L1 -224 5897 5669 867 227 40 82 chr20 30904065 30904369 -41249513 - LTR16C LTR ERVL -51 440 150 1078 192 56 83 chr20 30904888 30905274 -41248608 - MLT2B2 LTR ERVL -52 362 3 21703 163 22 42 chr20 30905276 30905547 -41248335 - ERVL-B2 LTR ERVL -7 5757 5482 1602 165 3 30 chr20 30905547 30905844 -41248038 + AluJb SINE Alu 1 289 -23 21703 163 22 42 chr20 30905844 30909602 -41244280 - ERVL-B2 LTR ERVL -282 5482 1811 181 191 111 16 chr20 30912155 30912218 -41241664 + MIR SINE MIR 133 201 -61 920 130 26 1 chr20 30913384 30913556 -41240326 + L1PA16 LINE L1 5299 5490 -675 295 178 0 0 chr20 30913556 30913601 -41240281 + AluJ/FRAM SINE Alu 229 273 -29 3918 176 14 13 chr20 30913617 30914305 -41239577 + L1PA16 LINE L1 5476 6164 -2 216 86 0 0 chr20 30915272 30915307 -41238575 + (TG)n Simple_repeat Simple_repeat 2 36 0 1188 157 40 0 chr20 30916140 30916338 -41237544 + LTR39 LTR ERV1 1 206 -577 186 43 0 0 chr20 30916520 30916543 -41237339 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 2076 18 0 0 chr20 30916604 30916832 -41237050 + AluYa5 SINE Alu 79 306 -5 6748 96 11 1 chr20 30916960 30918788 -41235094 - L1PA11 LINE L1 0 6174 4327 3662 128 7 2 chr20 30918788 30919343 -41234539 + L1PA11 LINE L1 3772 4329 -1817 789 188 34 0 chr20 30919622 30919771 -41234111 + MER5A DNA MER1_type 1 154 -35 381 357 54 79 chr20 30920018 30920708 -41233174 - L2 LINE L2 -7 3265 2584 303 146 0 0 chr20 30921463 30921518 -41232364 + (TCCC)n Simple_repeat Simple_repeat 4 58 0 2001 136 69 28 chr20 30921523 30921883 -41231999 + THE1C LTR MaLR 1 375 0 889 177 111 44 chr20 30922207 30922512 -41231370 + MER66A LTR ERV1 97 408 -70 8741 201 93 28 chr20 30922556 30924586 -41229296 + MER66A-int LTR ERV1 3 2164 -4512 6271 210 43 25 chr20 30924579 30925836 -41228046 + MER66A-int LTR ERV1 2336 3621 -3055 * 2076 105 0 11 chr20 30925836 30926162 -41227720 + AluSx SINE Alu 1 323 0 6271 210 43 25 chr20 30926162 30926224 -41227658 + MER66A-int LTR ERV1 3621 3680 -2996 360 203 283 7 chr20 30926204 30926342 -41227540 + MER66-int LTR ERV1 1701 1876 -6244 * 311 267 0 0 chr20 30926332 30926407 -41227475 + MER66-int LTR ERV1 4060 4134 -2542 * 3411 170 45 70 chr20 30926403 30927305 -41226577 + MER66-int LTR ERV1 2411 4941 -1735 1575 155 69 28 chr20 30927280 30927570 -41226312 + MER66-int LTR ERV1 6366 6667 -9 * 251 309 49 0 chr20 30927700 30927781 -41226101 - L2 LINE L2 0 3272 3188 534 231 38 6 chr20 30927807 30927967 -41225915 - Charlie4 DNA MER1_type -49 1912 1748 407 235 59 47 chr20 30927982 30928152 -41225730 - Charlie4 DNA MER1_type -1766 195 24 728 230 88 13 chr20 30928871 30929097 -41224785 + L2 LINE L2 2336 2578 -736 192 311 108 20 chr20 30929754 30929902 -41223980 + L2 LINE L2 1611 1771 -1543 235 390 7 14 chr20 30930292 30930433 -41223449 + L2 LINE L2 2213 2352 -962 627 258 11 39 chr20 30930953 30931131 -41222751 + MER5B DNA MER1_type 3 175 -3 1180 166 0 67 chr20 30931192 30931436 -41222446 - AluJb SINE Alu 0 312 87 1342 231 20 20 chr20 30931441 30931792 -41222090 + L1MCa LINE L1 1177 1527 -5037 1170 189 16 28 chr20 30931995 30932243 -41221639 - LTR52 LTR ERVL -3 418 174 897 199 9 66 chr20 30932240 30932466 -41221416 - LTR52 LTR ERVL -206 215 3 * 995 256 69 11 chr20 30932468 30932832 -41221050 + L1MCa LINE L1 1640 1982 -4763 15356 143 22 18 chr20 30932832 30935242 -41218640 + Tigger1 DNA MER2_type 1 2418 0 995 256 69 11 chr20 30935242 30935407 -41218475 + L1MCa LINE L1 1982 2393 -4352 579 221 23 19 chr20 30935399 30935599 -41218283 + L1MCa LINE L1 1 163 -5882 * 2716 242 46 39 chr20 30935605 30935950 -41217932 + L1MCa LINE L1 2978 3319 -3245 2460 88 0 0 chr20 30935950 30936256 -41217626 + AluSg SINE Alu 1 306 -4 2716 242 46 39 chr20 30936256 30936782 -41217100 + L1MCa LINE L1 3319 3860 -2704 2363 106 0 0 chr20 30936782 30937094 -41216788 + AluSx SINE Alu 1 312 0 2716 242 46 39 chr20 30937094 30937265 -41216617 + L1MCa LINE L1 3860 4028 -2536 4709 137 16 0 chr20 30937274 30937967 -41215915 - L1PA15 LINE L1 -2 6163 5460 820 224 49 26 chr20 30937967 30938231 -41215651 + L1MCa LINE L1 4831 5100 -1464 359 211 11 0 chr20 30938637 30938732 -41215150 + (TA)n Simple_repeat Simple_repeat 2 97 0 436 320 141 0 chr20 30939061 30939267 -41214615 - MIR SINE MIR -12 250 16 211 232 87 73 chr20 30940422 30940507 -41213375 + MIR SINE MIR 11 97 -111 264 289 22 0 chr20 30940876 30940966 -41212916 + MER94 DNA DNA 1 92 -42 604 84 0 0 chr20 30941637 30941720 -41212162 + MLT2A2 LTR ERVL 371 453 0 4088 93 21 12 chr20 30942098 30942668 -41211214 + L1PA16 LINE L1 5583 6157 -9 337 320 82 17 chr20 30942929 30943160 -41210722 - L1MDa LINE L1 -1724 4816 4571 843 262 35 38 chr20 30943309 30943622 -41210260 - LTR16C LTR ERVL -1 490 179 242 272 25 25 chr20 30945626 30945707 -41208175 + L2 LINE L2 3225 3305 -8 456 267 0 0 chr20 30946683 30946773 -41207109 - MER81 DNA DNA -15 99 10 1080 299 49 13 chr20 30949461 30949849 -41204033 + LTR16C LTR ERVL 89 490 -1 322 228 0 0 chr20 30950028 30950085 -41203797 - MER5A DNA MER1_type -123 66 10 2155 133 7 0 chr20 30950117 30950426 -41203456 - AluSx SINE Alu -1 311 1 557 199 64 0 chr20 30950935 30951091 -41202791 - L1MC5 LINE L1 -520 7441 7276 383 299 126 11 chr20 30951114 30951463 -41202419 - L1MC4a LINE L1 -492 7710 7394 451 291 62 19 chr20 30951540 30951750 -41202132 - L1MC4 LINE L1 -995 7047 6829 630 261 108 112 chr20 30951933 30952976 -41200906 - L1MC4a LINE L1 -1352 6850 5812 229 282 39 0 chr20 30952959 30953037 -41200845 - L1MC4a LINE L1 -2379 4161 4081 * 489 219 0 0 chr20 30953592 30953697 -41200185 - L1MC4a LINE L1 -3778 2762 2658 1115 257 66 13 chr20 30953710 30954338 -41199544 - L1MDa LINE L1 -2146 4394 3603 506 273 53 0 chr20 30954342 30954529 -41199353 - L1MDa LINE L1 -3384 3156 2960 3139 144 86 7 chr20 30954529 30955135 -41198747 - L1 LINE L1 -1107 5039 4386 * 6899 208 61 45 chr20 30955110 30957374 -41196508 - L1MDa LINE L1 -4043 2497 21 186 125 0 0 chr20 30957757 30957766 -41196116 + (GGGAGA)n Simple_repeat Simple_repeat 5 13 -23 2378 128 31 17 chr20 30957766 30958125 -41195757 - THE1B LTR MaLR 0 364 1 186 125 0 0 chr20 30958125 30958147 -41195735 + (GGGAGA)n Simple_repeat Simple_repeat 12 36 0 218 276 28 117 chr20 30958520 30958665 -41195217 + MIR3 SINE MIR 13 144 -64 2511 231 48 63 chr20 30959082 30959815 -41194067 - MER72 LTR ERV1 0 722 1 884 257 70 103 chr20 30961049 30961684 -41192198 - MER77 LTR ERV1 -4 601 79 22 0 0 0 chr20 30962334 30962356 -41191526 + AT_rich Low_complexity Low_complexity 1 22 0 561 234 0 0 chr20 30962751 30962909 -41190973 + (TG)n Simple_repeat Simple_repeat 1 158 0 1788 115 4 0 chr20 30964095 30964348 -41189534 + L1PA13 LINE L1 5907 6160 -3 872 167 160 6 chr20 30964746 30964902 -41188980 + AluSx SINE Alu 2 181 -131 301 319 92 32 chr20 30964923 30965108 -41188774 + L1MC4a LINE L1 4064 4259 -1887 538 132 0 0 chr20 30965134 30965210 -41188672 + AluSg/x SINE Alu 198 273 -37 218 260 82 27 chr20 30966554 30966627 -41187255 + MIR SINE MIR 74 150 -112 286 304 116 38 chr20 30967555 30967901 -41185981 + L1MC4a LINE L1 5534 5906 -1902 596 181 60 23 chr20 30968185 30968284 -41185598 - MER65A LTR ERV1 0 445 338 359 21 21 0 chr20 30968284 30968332 -41185550 + (TG)n Simple_repeat Simple_repeat 2 50 0 596 181 60 23 chr20 30968332 30968365 -41185517 - MER65A LTR ERV1 -107 338 308 34 0 0 0 chr20 30968366 30968400 -41185482 + AT_rich Low_complexity Low_complexity 1 34 0 713 192 123 0 chr20 30968401 30968547 -41185335 - U1 snRNA snRNA -1 164 1 * 1596 152 22 105 chr20 30968537 30968898 -41184984 - MER65A LTR ERV1 -114 331 1 22 0 0 0 chr20 30968915 30968937 -41184945 + AT_rich Low_complexity Low_complexity 1 22 0 991 98 0 0 chr20 30969084 30969207 -41184675 + AluSq/x SINE Alu 3 125 -187 365 297 42 21 chr20 30970411 30970603 -41183279 + MER105 DNA DNA 9 204 0 323 248 83 16 chr20 30971014 30971135 -41182747 - L1M4 LINE L1 -3841 2305 2177 1099 117 13 0 chr20 30971168 30971322 -41182560 - AluSc SINE Alu -18 291 136 201 74 0 0 chr20 31021532 31021559 -41132323 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 195 323 65 24 chr20 31022060 31022184 -41131698 - MIR SINE MIR -43 219 91 2414 217 50 35 chr20 31024011 31024591 -41129291 - MLT1E LTR MaLR -4 589 1 181 296 0 0 chr20 31024739 31024783 -41129099 + MIR SINE MIR 217 260 -2 616 252 19 0 chr20 31025187 31025346 -41128536 + ERVL LTR ERVL 4851 5012 -752 303 241 13 0 chr20 31026601 31026680 -41127202 + LTR16C LTR ERVL 75 154 -337 399 240 50 0 chr20 31027202 31027323 -41126559 + LTR16C LTR ERVL 350 476 -15 312 323 17 82 chr20 31027868 31028100 -41125782 - MIR SINE MIR -37 225 9 415 280 23 0 chr20 31028186 31028318 -41125564 - Charlie4a DNA MER1_type -14 494 360 3604 100 13 13 chr20 31028321 31028843 -41125039 - L1PB3 LINE L1 -6 6148 5627 444 209 50 7 chr20 31028849 31028988 -41124894 + L1P LINE L1 5089 5233 -913 1962 107 71 0 chr20 31029000 31029281 -41124601 - AluSx SINE Alu -11 301 1 529 293 158 13 chr20 31029283 31029600 -41124282 - Charlie4a DNA MER1_type -145 363 1 233 247 155 31 chr20 31029856 31029953 -41123929 + MER5A DNA MER1_type 59 167 -22 * 286 258 67 22 chr20 31029894 31029983 -41123899 - MER5A DNA MER1_type -95 94 2 221 41 41 41 chr20 31030509 31030558 -41123324 + (GGA)n Simple_repeat Simple_repeat 1 49 0 218 317 79 0 chr20 31030669 31030770 -41123112 - MIR SINE MIR -120 142 34 427 160 0 0 chr20 31032382 31032457 -41121425 - MLT1J LTR MaLR -335 176 102 1548 183 48 3 chr20 31033666 31033999 -41119883 + MER68 LTR ERV1 43 390 -172 332 136 45 0 chr20 31034003 31034069 -41119813 + MER68 LTR ERV1 322 390 -172 345 121 45 0 chr20 31034073 31034139 -41119743 + MER68 LTR ERV1 322 390 -172 295 167 45 0 chr20 31034143 31034209 -41119673 + MER68 LTR ERV1 322 390 -172 303 167 45 0 chr20 31034213 31034279 -41119603 + MER68 LTR ERV1 322 390 -172 959 226 48 0 chr20 31034283 31034513 -41119369 + MER68 LTR ERV1 322 562 0 276 286 75 30 chr20 31035914 31036047 -41117835 + MIR3 SINE MIR 1 139 -69 365 319 6 0 chr20 31036228 31036385 -41117497 + MER103 DNA DNA 8 165 -1 2632 155 40 2 chr20 31037133 31037577 -41116305 - MER65C LTR ERV1 0 461 1 307 243 65 9 chr20 31037799 31037906 -41115976 + Charlie7 DNA MER1_type 45 157 -2455 843 226 28 0 chr20 31038093 31038270 -41115612 + MER5A DNA MER1_type 7 188 -1 1124 251 166 31 chr20 31038439 31038958 -41114924 + MLT1G LTR MaLR 1 589 -1 327 320 41 8 chr20 31039075 31039197 -41114685 - MIR3 SINE MIR -33 175 50 193 259 37 19 chr20 31039216 31039270 -41114612 + MIR SINE MIR 20 74 -188 404 275 219 1 chr20 31040182 31040352 -41113530 - MLT1J LTR MaLR -199 312 67 240 35 0 0 chr20 31044089 31044118 -41109764 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 1970 112 0 14 chr20 31044119 31044404 -41109478 - AluSq SINE Alu -32 281 1 182 156 0 0 chr20 31045081 31045113 -41108769 + MIR SINE MIR 118 149 -113 293 299 11 0 chr20 31045309 31045396 -41108486 + MER94 DNA DNA 18 105 -29 368 300 23 0 chr20 31046262 31046392 -41107490 + LTR16A LTR ERVL 138 270 -180 352 217 24 0 chr20 31046432 31046515 -41107367 + LTR16A LTR ERVL 366 450 0 233 351 36 0 chr20 31046563 31046674 -41107208 + (CATG)n Simple_repeat Simple_repeat 4 118 0 2169 123 3 0 chr20 31047946 31048256 -41105626 - AluSx SINE Alu -1 311 1 2401 74 0 3 chr20 31048349 31048661 -41105221 - AluY SINE Alu 0 311 1 351 242 32 0 chr20 31048721 31048816 -41105066 - MLT1G1 LTR MaLR -11 584 487 206 404 22 7 chr20 31049434 31049570 -41104312 - L2 LINE L2 -2914 400 263 191 314 47 12 chr20 31049744 31049830 -41104052 - MIR SINE MIR -111 151 63 367 339 252 4 chr20 31050014 31050268 -41103614 + L1MC4 LINE L1 7402 7718 -324 604 193 83 5 chr20 31050271 31050312 -41103570 + L1PA16 LINE L1 5988 6024 -138 2127 126 0 0 chr20 31050312 31050613 -41103269 + AluSg SINE Alu 1 301 -9 604 193 83 5 chr20 31050613 31050731 -41103151 + L1PA16 LINE L1 6024 6157 -5 21 0 0 0 chr20 31050762 31050783 -41103099 + AT_rich Low_complexity Low_complexity 1 21 0 266 364 7 36 chr20 31050790 31050930 -41102952 + L1MC4 LINE L1 7764 7899 -143 257 222 0 16 chr20 31050926 31050989 -41102893 + L1MC4a LINE L1 7747 7808 0 * 236 229 46 46 chr20 31051613 31051766 -41102116 + (CCCTA)n Simple_repeat Simple_repeat 2 154 0 182 326 116 11 chr20 31053071 31053166 -41100716 - MER5A DNA MER1_type -22 167 63 801 216 0 3 chr20 31053247 31053575 -41100307 + (TG)n Simple_repeat Simple_repeat 1 326 0 214 227 67 27 chr20 31053609 31053684 -41100198 - MER5A DNA MER1_type -100 89 12 1525 287 30 6 chr20 31056830 31057331 -41096551 - LTR45 LTR ERV1 -12 513 1 344 343 30 0 chr20 31057722 31057856 -41096026 + MER5B DNA MER1_type 40 177 -1 331 341 169 19 chr20 31059153 31059473 -41094409 - L2 LINE L2 -36 3277 2910 455 174 94 36 chr20 31059801 31059939 -41093943 + MLT1G LTR MaLR 148 293 -297 489 181 78 0 chr20 31059992 31060108 -41093774 + MLT1G LTR MaLR 461 585 -5 1938 149 67 15 chr20 31060809 31061152 -41092730 + MER46B DNA MER2_type 1 236 0 192 40 0 0 chr20 31062443 31062468 -41091414 + (GA)n Simple_repeat Simple_repeat 2 26 0 1403 229 59 61 chr20 31062717 31063227 -41090655 + L1MB5 LINE L1 5666 6174 0 1109 269 91 27 chr20 31064560 31065044 -41088838 - MLT1E2 LTR MaLR -1 625 111 1288 164 51 101 chr20 31065062 31065442 -41088440 - MLT1A1 LTR MaLR -8 449 1 271 114 0 23 chr20 31065497 31065541 -41088341 - MLT1E2 LTR MaLR -611 43 1 442 286 42 24 chr20 31065677 31065845 -41088037 - MIR SINE MIR -33 229 59 618 119 0 50 chr20 31066413 31066514 -41087368 + AluSg/x SINE Alu 208 303 -7 228 266 14 21 chr20 31067099 31067242 -41086640 + (CATATA)n Simple_repeat Simple_repeat 5 146 0 226 270 16 0 chr20 31067361 31067424 -41086458 + (CA)n Simple_repeat Simple_repeat 1 64 0 635 178 16 47 chr20 31067652 31067805 -41086077 + FLAM_A SINE Alu 1 133 0 539 233 14 48 chr20 31068311 31068457 -41085425 - MIR SINE MIR -44 218 78 1131 260 130 9 chr20 31068919 31069342 -41084540 + MLT1E2 LTR MaLR 137 610 -16 280 312 51 58 chr20 31069534 31069672 -41084210 + MIR SINE MIR 53 189 -73 1832 198 97 11 chr20 31069763 31070227 -41083655 + MLT1D LTR MaLR 2 505 0 588 265 25 25 chr20 31070982 31071144 -41082738 - MIR SINE MIR -70 192 31 1588 176 28 72 chr20 31071178 31071424 -41082458 + MLT1A2 LTR MaLR 1 225 -149 4148 155 78 7 chr20 31071424 31072155 -41081727 + LTR39 LTR ERV1 1 783 0 1588 176 28 72 chr20 31072155 31072295 -41081587 + MLT1A2 LTR MaLR 225 370 -4 229 318 123 7 chr20 31073252 31073406 -41080476 + MIR SINE MIR 29 200 -62 490 190 103 48 chr20 31074633 31074796 -41079086 + MIR SINE MIR 40 232 -30 363 155 36 83 chr20 31075858 31075942 -41077940 - MER116 DNA Mariner 0 80 1 308 245 38 9 chr20 31076392 31076498 -41077384 + (CCCA)n Simple_repeat Simple_repeat 2 110 0 288 226 65 0 chr20 31076861 31076923 -41076959 + MLT1L LTR MaLR 217 282 -333 1962 132 165 8 chr20 31076938 31077308 -41076574 - MSTA LTR MaLR 0 428 1 218 304 114 91 chr20 31077720 31077940 -41075942 - L3b LINE CR1 -40 1543 1319 2502 184 26 2 chr20 31078074 31078530 -41075352 + LTR24 LTR ERV1 1 467 0 432 280 34 40 chr20 31078593 31078768 -41075114 - MER104 DNA Tc2 -1 179 6 207 331 155 7 chr20 31080157 31080299 -41073583 + MIR3 SINE MIR 10 172 -36 4718 138 3 1 chr20 31081174 31081905 -41071977 + L1PA16 LINE L1 5423 6154 -12 24 32 0 0 chr20 31081912 31081943 -41071939 + AT_rich Low_complexity Low_complexity 1 31 0 25 0 0 0 chr20 31082227 31082252 -41071630 + AT_rich Low_complexity Low_complexity 1 25 0 2002 109 17 17 chr20 31082380 31082682 -41071200 + LTR8 LTR ERV1 390 691 0 499 227 172 0 chr20 31083206 31083369 -41070513 + MER21B LTR ERV1 613 803 -60 503 241 6 0 chr20 31083740 31083902 -41069980 + (TG)n Simple_repeat Simple_repeat 2 164 0 362 242 58 33 chr20 31084128 31084248 -41069634 + MER94 DNA DNA 1 123 -11 324 0 0 0 chr20 31084395 31084431 -41069451 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 25571 127 12 18 chr20 31084431 31084763 -41069119 - L1PA8 LINE L1 -17 6155 5822 1900 96 31 8 chr20 31084763 31085023 -41068859 - AluY SINE Alu -7 304 39 25571 127 12 18 chr20 31085023 31089002 -41064880 - L1PA8 LINE L1 -350 5822 1886 2176 88 0 0 chr20 31089002 31089265 -41064617 - AluY SINE Alu -16 295 33 25571 127 12 18 chr20 31089265 31090251 -41063631 - L1PA8 LINE L1 -4286 1886 895 412 226 10 10 chr20 31091049 31091165 -41062717 - MER97a DNA MER1_type? 0 894 803 1863 203 46 110 chr20 31091165 31091248 -41062634 + L1M4 LINE L1 4766 4853 -1331 2214 122 0 3 chr20 31091248 31091542 -41062340 - AluSp SINE Alu -19 294 2 1863 203 46 110 chr20 31091542 31092107 -41061775 + L1M4 LINE L1 4853 5453 -731 189 0 0 0 chr20 31092107 31092128 -41061754 + (CACCT)n Simple_repeat Simple_repeat 3 23 0 1863 203 46 110 chr20 31092128 31092162 -41061720 + L1M4 LINE L1 5453 5488 -696 1490 212 0 34 chr20 31092162 31092455 -41061427 + AluJo SINE Alu 1 283 -29 1863 203 46 110 chr20 31092455 31092668 -41061214 + L1M4 LINE L1 5488 5601 -583 2871 178 64 70 chr20 31092668 31093399 -41060483 - LTR8A LTR ERV1 0 727 1 1863 203 46 110 chr20 31093399 31093477 -41060405 + L1M4 LINE L1 5601 5682 -502 272 179 51 0 chr20 31093450 31093526 -41060356 + L1ME1 LINE L1 6096 6183 -1 * 409 171 62 23 chr20 31093529 31093658 -41060224 - MER97a DNA MER1_type? -84 810 677 1846 130 52 50 chr20 31093659 31094098 -41059784 + LTR56 LTR ERV1 2 437 0 582 216 26 31 chr20 31094098 31094286 -41059596 - MER97c DNA MER1_type? -414 676 490 2298 212 37 88 chr20 31094302 31095033 -41058849 + LTR8A LTR ERV1 34 727 0 623 276 64 58 chr20 31095034 31095346 -41058536 - MER97a DNA MER1_type? -402 492 179 * 2972 154 58 23 chr20 31095290 31095861 -41058021 - LTR59 LTR ERV1 -6 591 1 925 187 79 10 chr20 31095868 31096071 -41057811 - MER97c DNA MER1_type? -835 255 39 454 284 43 25 chr20 31096490 31096652 -41057230 + MIR3 SINE MIR 16 180 -28 2582 172 71 69 chr20 31096856 31097549 -41056333 + LTR8A LTR ERV1 34 727 0 4706 83 84 9 chr20 31098711 31099351 -41054531 - LTR12 LTR ERV1 0 688 1 330 351 163 25 chr20 31099713 31099958 -41053924 + L3 LINE CR1 702 980 -597 414 304 92 20 chr20 31100393 31100643 -41053239 + L2 LINE L2 2589 2856 -458 232 307 109 0 chr20 31100861 31100962 -41052920 + L2 LINE L2 3117 3228 -44 576 77 0 0 chr20 31101116 31101194 -41052688 + (TGGA)n Simple_repeat Simple_repeat 1 78 0 302 290 28 37 chr20 31102335 31102442 -41051440 - MIR SINE MIR -103 159 54 381 317 111 10 chr20 31102675 31102883 -41050999 + L1MEd LINE L1 444 672 -5447 222 184 26 0 chr20 31102898 31102936 -41050946 - MER5A DNA MER1_type -136 53 15 357 226 0 54 chr20 31103277 31103370 -41050512 + L1MEd LINE L1 2214 2301 -3828 331 246 112 0 chr20 31103679 31103813 -41050069 + L1MEd LINE L1 2732 2880 -3249 1156 141 78 36 chr20 31103908 31104222 -41049660 + THE1C LTR MaLR 1 375 0 6124 124 17 53 chr20 31104224 31105300 -41048582 + THE1C-int LTR MaLR 3 1039 -541 919 158 16 49 chr20 31105300 31105483 -41048399 + THE1B LTR MaLR 153 329 -35 774 199 104 56 chr20 31105483 31105770 -41048112 - MLT1A2 LTR MaLR -73 301 1 937 230 31 27 chr20 31106300 31106561 -41047321 - MLT1F1 LTR MaLR -1 566 305 1365 227 81 17 chr20 31106590 31107000 -41046882 + L1MEc LINE L1 419 854 -5542 2188 128 0 7 chr20 31107204 31107508 -41046374 + AluSx SINE Alu 1 302 -10 283 272 182 30 chr20 31108702 31109037 -41044845 - MLT1H LTR MaLR -28 521 136 1965 187 15 0 chr20 31109814 31110157 -41043725 + MER7A DNA MER2_type 1 346 0 2679 214 100 13 chr20 31110164 31110836 -41043046 - L1MB7 LINE L1 0 6184 5455 385 214 177 38 chr20 31111069 31111357 -41042525 + MLT1G LTR MaLR 109 528 -62 361 208 274 14 chr20 31115887 31116033 -41037849 - MIR SINE MIR -69 193 13 669 241 36 20 chr20 31116078 31116273 -41037609 - L1ME1 LINE L1 -18 6148 5951 2002 161 0 10 chr20 31116289 31116600 -41037282 - AluJb SINE Alu 0 312 5 1817 222 20 4 chr20 31116895 31117346 -41036536 + L1MB4 LINE L1 4929 5386 -760 797 183 0 8 chr20 31117347 31117473 -41036409 + AluSq/x SINE Alu 2 126 -187 4511 161 8 5 chr20 31117488 31118283 -41035599 + L1MB4 LINE L1 5374 6170 -10 402 136 62 0 chr20 31118298 31118379 -41035503 + L1MB8 LINE L1 6093 6178 0 198 0 0 0 chr20 31118546 31118568 -41035314 + (A)n Simple_repeat Simple_repeat 1 22 0 1687 51 5 5 chr20 31118602 31118818 -41035064 - L1PA4 LINE L1 -5 6150 5935 2075 25 0 0 chr20 31118818 31119063 -41034819 + L1P2 LINE L1 5474 5718 -437 322 330 90 21 chr20 31120100 31120333 -41033549 + MLT1L LTR MaLR 59 307 -242 427 269 35 45 chr20 31121315 31121516 -41032366 + MLT1L LTR MaLR 130 328 -287 549 250 51 11 chr20 31121620 31121796 -41032086 + MLT1L LTR MaLR 357 539 -76 921 241 70 3 chr20 31121867 31122153 -41031729 + L1M4 LINE L1 3627 3931 -2215 370 250 28 9 chr20 31122194 31122302 -41031580 + L1ME3A LINE L1 6056 6165 -5 310 311 26 46 chr20 31122328 31122479 -41031403 + L1ME LINE L1 3463 3610 -2536 391 222 130 32 chr20 31122654 31122870 -41031012 + L1ME LINE L1 3731 3967 -2179 11535 185 38 57 chr20 31122870 31125289 -41028593 + L1MB3 LINE L1 24 2345 -4037 800 225 184 44 chr20 31125289 31125609 -41028273 - MLT1A1 LTR MaLR 0 365 1 11535 185 38 57 chr20 31125609 31127163 -41026719 + L1MB3 LINE L1 2345 3926 -2456 4475 201 30 49 chr20 31127162 31129391 -41024491 + L1MB3 LINE L1 4171 6357 -62 * 2190 129 0 0 chr20 31129391 31129694 -41024188 + AluSx SINE Alu 1 303 -9 4475 201 30 49 chr20 31129694 31129755 -41024127 + L1MB3 LINE L1 6357 6418 -1 831 271 97 81 chr20 31129770 31131375 -41022507 + L1ME LINE L1 3947 5565 -597 304 284 88 0 chr20 31131645 31131747 -41022135 + L1MC4 LINE L1 7927 8037 -5 248 291 111 0 chr20 31133675 31133792 -41020090 + L1ME LINE L1 6 135 -5935 504 259 48 0 chr20 31134079 31134226 -41019656 + MER5A DNA MER1_type 33 186 -3 497 259 57 69 chr20 31134957 31135219 -41018663 + MIR SINE MIR 3 261 -1 1847 198 27 0 chr20 31135292 31135666 -41018216 + MER65C LTR ERV1 1 384 -77 1964 125 142 5 chr20 31135676 31136043 -41017839 - MSTA LTR MaLR -11 417 1 315 185 25 12 chr20 31136043 31136124 -41017758 + MER65C LTR ERV1 380 461 0 222 173 136 74 chr20 31136332 31136413 -41017469 + L3 LINE CR1 1081 1166 -411 358 273 25 83 chr20 31136893 31137135 -41016747 + L1MC5 LINE L1 7690 7917 -44 1663 212 94 16 chr20 31137229 31137653 -41016229 + LTR32 LTR ERVL 15 471 0 3696 198 61 11 chr20 31137659 31138441 -41015441 - MER21B LTR ERV1 -40 823 3 361 268 45 71 chr20 31138652 31138850 -41015032 + LTR56 LTR ERV1 22 214 -231 1820 179 70 31 chr20 31138872 31139431 -41014451 - LTR27 LTR ERV1 0 636 3 685 138 9 0 chr20 31139433 31139542 -41014340 - LTR27-int LTR ERV1 -1 7090 6981 * 855 104 15 0 chr20 31139539 31139674 -41014208 - MER61-int LTR ERV1 -2077 3140 3004 1523 127 37 4 chr20 31139676 31139920 -41013962 - LTR28 LTR ERV1 -768 252 1 422 280 55 10 chr20 31139920 31140146 -41013736 + LTR56 LTR ERV1 232 437 0 400 176 59 0 chr20 31140549 31140634 -41013248 + LTR39 LTR ERV1 1 90 -693 40732 41 24 1 chr20 31140891 31146904 -41006978 + L1PA2 LINE L1 4 6155 0 2815 237 55 8 chr20 31146970 31147924 -41005958 + L1ME2 LINE L1 5155 6155 -9 5948 87 5 4 chr20 31147983 31148807 -41005075 + L1PA11 LINE L1 5346 6170 -4 22 0 0 0 chr20 31148837 31148859 -41005023 + AT_rich Low_complexity Low_complexity 1 22 0 1010 247 45 77 chr20 31148873 31149250 -41004632 + MSTD LTR MaLR 32 396 0 222 269 176 8 chr20 31151130 31151249 -41002633 + MER5A DNA MER1_type 1 139 -50 217 211 39 19 chr20 31152116 31152168 -41001714 + MER5A DNA MER1_type 49 101 -88 4044 149 115 10 chr20 31152169 31152968 -41000914 + MER4D LTR ERV1 4 886 -17 531 233 192 11 chr20 31153406 31153672 -41000210 - MER89 LTR ERV1 -70 489 176 5409 59 1 1 chr20 31154125 31154785 -40999097 + PABL_A LTR ERV1 1 660 0 301 323 8 31 chr20 31154934 31155061 -40998821 + MLT1E2 LTR MaLR 113 236 -390 223 291 0 18 chr20 31155119 31155229 -40998653 + C-rich Low_complexity Low_complexity 4 111 0 181 311 96 36 chr20 31155594 31155761 -40998121 + L2 LINE L2 2866 3042 -271 658 161 36 7 chr20 31156623 31156760 -40997122 - MER53 DNA DNA -7 182 42 263 304 149 5 chr20 31157127 31157328 -40996554 - MLT1K LTR MaLR -36 552 323 881 234 159 18 chr20 31157915 31158432 -40995450 + MLT1G1 LTR MaLR 17 589 -1 239 243 153 72 chr20 31159292 31159403 -40994479 + MIR SINE MIR 28 147 -115 436 163 54 11 chr20 31159421 31159513 -40994369 + L1MA8 LINE L1 6055 6150 -141 1624 204 41 60 chr20 31159597 31160014 -40993868 + LTR2 LTR ERV1 41 449 0 14843 79 3 5 chr20 31160014 31162007 -40991875 + HERVE LTR ERV1 1 1989 -5824 39939 40 1 10 chr20 31162009 31168195 -40985687 + L1PA4 LINE L1 26 6155 0 35318 66 28 7 chr20 31168230 31172865 -40981017 + HERVE LTR ERV1 1975 6705 -1108 1162 80 0 0 chr20 31172867 31173018 -40980864 + HERVE LTR ERV1 6930 7080 -733 1360 227 48 3 chr20 31173018 31173313 -40980569 + LTR2 LTR ERV1 142 449 0 516 186 16 39 chr20 31173325 31173454 -40980428 + L1MA8 LINE L1 6164 6289 -2 261 292 167 7 chr20 31174237 31174381 -40979501 + MIR SINE MIR 93 259 -3 280 207 24 49 chr20 31175184 31175266 -40978616 - MER103 DNA DNA -65 101 22 796 233 122 21 chr20 31175782 31176117 -40977765 - L1MC4 LINE L1 -967 7075 6707 1144 231 150 66 chr20 31176144 31176690 -40977192 + MLT1E LTR MaLR 1 592 -1 650 207 53 18 chr20 31177457 31177626 -40976256 - MER5A DNA MER1_type -6 183 9 195 162 0 0 chr20 31177643 31177680 -40976202 + (TGAA)n Simple_repeat Simple_repeat 4 40 0 411 297 6 22 chr20 31177755 31177937 -40975945 + (CA)n Simple_repeat Simple_repeat 2 180 0 21784 179 44 15 chr20 31178020 31182144 -40971738 - ERVL-B1 LTR ERVL -1501 4263 20 1814 176 71 77 chr20 31182164 31182687 -40971195 - MLT2B1 LTR ERVL 0 520 1 185 237 0 13 chr20 31182781 31182857 -40971025 + (CA)n Simple_repeat Simple_repeat 2 76 0 218 346 20 0 chr20 31183841 31183942 -40969940 - MIR SINE MIR -132 130 28 298 65 0 0 chr20 31184322 31184368 -40969514 - L1PA7 LINE L1 -4854 1607 1562 27514 85 11 1 chr20 31184375 31189194 -40964688 + L1PA7 LINE L1 1609 6469 0 272 157 20 0 chr20 31190388 31190439 -40963443 - MIR SINE MIR -134 128 77 206 222 48 16 chr20 31190529 31190592 -40963290 - MIR SINE MIR -59 149 85 551 208 0 0 chr20 31192527 31192628 -40961254 - MIR SINE MIR -115 147 47 1045 206 100 5 chr20 31193458 31193744 -40960138 - LTR26B LTR ERV1 -19 512 235 489 191 21 0 chr20 31193739 31193833 -40960049 - LTR26E LTR ERV1 -526 96 1 * 429 185 115 55 chr20 31194947 31195147 -40958735 + HAL1b LINE L1 910 1121 -227 303 267 162 0 chr20 31195147 31195252 -40958630 + L1ME4a LINE L1 5997 6118 -3 180 0 0 0 chr20 31195323 31195343 -40958539 + (CAA)n Simple_repeat Simple_repeat 2 21 0 210 267 33 0 chr20 31195604 31195664 -40958218 + MER5A DNA MER1_type 30 91 -98 2551 48 0 0 chr20 31195732 31196024 -40957858 - AluY SINE Alu -9 302 11 355 284 6 33 chr20 31197271 31197454 -40956428 + G-rich Low_complexity Low_complexity 1 178 0 185 93 0 74 chr20 31199633 31199687 -40954195 + (TA)n Simple_repeat Simple_repeat 1 50 0 276 299 94 0 chr20 31199689 31199816 -40954066 + L1MC4 LINE L1 7904 8042 0 180 210 65 65 chr20 31201029 31201091 -40952791 + MIR SINE MIR 85 146 -62 201 237 244 46 chr20 31205028 31205159 -40948723 + L3 LINE CR1 1321 1477 -100 1361 221 148 49 chr20 31206089 31206624 -40947258 + L1MC4 LINE L1 6469 7056 -986 1159 302 89 17 chr20 31206647 31207232 -40946650 + L1MC4 LINE L1 7196 7903 -139 2319 109 0 3 chr20 31207297 31207600 -40946282 + AluSx SINE Alu 1 302 -10 318 178 25 127 chr20 31207768 31207886 -40945996 - L2 LINE L2 -28 3285 3180 355 273 79 14 chr20 31207911 31208050 -40945832 - MIR SINE MIR -48 214 67 426 287 88 6 chr20 31211051 31211232 -40942650 - MIR SINE MIR -45 217 22 214 282 10 39 chr20 31211332 31211435 -40942447 + GA-rich Low_complexity Low_complexity 5 104 0 285 318 174 20 chr20 31213198 31213399 -40940483 + L1ME4a LINE L1 5878 6109 -12 645 154 0 27 chr20 31214456 31214566 -40939316 + U6 snRNA snRNA 1 107 0 1600 190 20 2 chr20 31214567 31215193 -40938689 + L1MC1 LINE L1 2194 2831 -3595 * 6039 179 26 39 chr20 31215187 31217692 -40936190 + L1MC1 LINE L1 4146 6613 0 193 332 124 9 chr20 31219561 31219787 -40934095 + L2 LINE L2 1372 1623 -1691 589 281 202 25 chr20 31219808 31220490 -40933392 + L2 LINE L2 2482 3308 -5 330 339 138 34 chr20 31221384 31221682 -40932200 + L3 LINE CR1 267 595 -982 764 203 51 6 chr20 31225689 31225891 -40927991 + MLT1D LTR MaLR 325 503 -2 1477 231 76 18 chr20 31225919 31226377 -40927505 + MLT1D-int LTR MaLR 11 495 -876 181 276 95 19 chr20 31227002 31227107 -40926775 - MIR SINE MIR -59 149 37 706 229 73 0 chr20 31227224 31227403 -40926479 - L1MB5 LINE L1 -225 5949 5758 1591 201 0 29 chr20 31227406 31227714 -40926168 - AluJo SINE Alu -13 299 1 971 156 5 47 chr20 31227739 31227931 -40925951 + L1MB5 LINE L1 5991 6174 0 584 204 8 0 chr20 31227941 31228073 -40925809 + L1MB7 LINE L1 6043 6175 -9 420 163 267 0 chr20 31229135 31229221 -40924661 + MER3 DNA MER1_type 3 111 -98 240 303 207 11 chr20 31229256 31229444 -40924438 - L3 LINE CR1 -554 1023 799 478 167 135 0 chr20 31231619 31231715 -40922167 - MER81 DNA DNA 0 114 6 254 265 54 75 chr20 31233773 31233920 -40919962 - L2 LINE L2 -42 3271 3128 214 365 133 8 chr20 31234317 31234566 -40919316 + L2 LINE L2 2804 3083 -189 924 167 76 48 chr20 31235186 31235396 -40918486 - MER20 DNA MER1_type -3 216 1 229 139 0 0 chr20 31236039 31236082 -40917800 + L1MA3 LINE L1 6263 6305 0 210 274 105 48 chr20 31236104 31236228 -40917654 - L2 LINE L2 -2808 506 376 391 157 0 14 chr20 31237611 31237681 -40916201 + Tigger2 DNA MER2_type 1 69 -2649 2620 113 15 5 chr20 31237688 31238096 -40915786 + Tigger2 DNA MER2_type 2307 2718 0 249 274 32 0 chr20 31239134 31239196 -40914686 - L2 LINE L2 -5 3308 3245 566 197 137 0 chr20 31239718 31239835 -40914047 - MER5B DNA MER1_type 0 178 46 331 301 110 1 chr20 31240123 31240276 -40913606 + L1ME3 LINE L1 5980 6145 -17 190 227 0 23 chr20 31240486 31240530 -40913352 + MER5A DNA MER1_type 45 87 -102 682 170 37 7 chr20 31240766 31240901 -40912981 + MER20 DNA MER1_type 1 139 -80 1848 147 13 37 chr20 31241098 31241398 -40912484 - AluJb SINE Alu -19 293 1 7224 52 0 1 chr20 31241487 31242932 -40910950 - L1PA5 LINE L1 -1 6153 4703 318 283 22 25 chr20 31243037 31243195 -40910687 + LTR16C LTR ERVL 304 491 0 1200 282 63 69 chr20 31243197 31244321 -40909561 + L1MEd LINE L1 1083 2212 -3917 796 189 0 0 chr20 31244321 31244453 -40909429 + FLAM_A SINE Alu 2 133 0 1200 282 63 69 chr20 31244453 31245084 -40908798 + L1MEd LINE L1 2212 2850 -3279 2359 104 0 0 chr20 31245084 31245381 -40908501 + AluSx SINE Alu 1 297 -15 1200 282 63 69 chr20 31245381 31245440 -40908442 + L1MEd LINE L1 2850 2908 -3221 497 176 89 3 chr20 31245903 31246039 -40907843 - MLT1A2 LTR MaLR 0 390 224 281 234 128 11 chr20 31246252 31246346 -40907536 + MER3 DNA MER1_type 83 187 -22 263 241 101 25 chr20 31249922 31250001 -40903881 + MIR SINE MIR 60 144 -64 503 257 81 0 chr20 31250580 31250716 -40903166 + L2 LINE L2 3167 3313 0 351 274 49 0 chr20 31250762 31250864 -40903018 + L2 LINE L2 2951 3057 -215 325 292 25 8 chr20 31251288 31251408 -40902474 + L1ME3 LINE L1 5375 5496 -666 240 316 101 34 chr20 31255094 31255303 -40898579 - MIR SINE MIR -19 243 21 2180 94 50 3 chr20 31255585 31255882 -40898000 - AluSx SINE Alu -1 311 1 370 336 124 13 chr20 31256157 31256607 -40897275 + L1ME3 LINE L1 5552 6051 -111 1074 133 6 61 chr20 31257264 31257444 -40896438 - AluJb SINE Alu -7 305 136 1394 193 149 17 chr20 31258351 31258699 -40895183 + MSTD LTR MaLR 1 394 -2 484 253 80 35 chr20 31258811 31258997 -40894885 + MIR SINE MIR 15 203 -59 699 129 10 0 chr20 31259825 31259926 -40893956 - FRAM SINE Alu -32 144 43 231 242 16 0 chr20 31262176 31262238 -40891644 + L1MC5 LINE L1 7316 7378 -583 2011 138 0 14 chr20 31262360 31262643 -40891239 + AluSx SINE Alu 1 279 -33 318 26 0 0 chr20 31262646 31262685 -40891197 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 299 330 19 0 chr20 31264850 31264953 -40888929 + LTR16C LTR ERVL 191 295 -196 1878 224 93 22 chr20 31265731 31266298 -40887584 - MLT1E2 LTR MaLR 0 626 1 828 280 102 58 chr20 31266528 31267002 -40886880 + MLT1G LTR MaLR 16 549 0 652 220 8 0 chr20 31267314 31267446 -40886436 + MIR SINE MIR 2 134 -128 7256 192 49 16 chr20 31267458 31268965 -40884917 + L1MB4 LINE L1 3515 5302 -878 1942 103 0 11 chr20 31268965 31269237 -40884645 + AluSc SINE Alu 41 309 0 7256 192 49 16 chr20 31269237 31270117 -40883765 + L1MB4 LINE L1 5302 6151 -29 287 206 10 98 chr20 31270123 31270225 -40883657 + MIR SINE MIR 142 234 -28 191 250 0 0 chr20 31270196 31270232 -40883650 + L2 LINE L2 3251 3286 -27 * 3182 160 45 2 chr20 31271510 31272042 -40881840 + MER41D LTR ERV1 3 557 0 339 250 12 0 chr20 31272522 31272606 -40881276 + MLT1K LTR MaLR 169 253 -335 447 310 159 45 chr20 31274381 31274860 -40879022 - L3 LINE CR1 -7 1570 1147 2257 81 3 10 chr20 31274860 31275156 -40878726 - AluSp SINE Alu -19 294 1 447 310 159 45 chr20 31275156 31275167 -40878715 - L3 LINE CR1 -430 1147 1139 2257 89 0 10 chr20 31275167 31275480 -40878402 - AluY SINE Alu -1 310 1 447 310 159 45 chr20 31275480 31275696 -40878186 - L3 LINE CR1 -438 1139 949 2115 109 7 0 chr20 31275696 31275989 -40877893 - AluSx SINE Alu -17 295 1 447 310 159 45 chr20 31275989 31276115 -40877767 - L3 LINE CR1 -628 949 641 1993 142 10 3 chr20 31276958 31277268 -40876614 + AluSx SINE Alu 1 312 0 403 99 14 14 chr20 31277271 31277342 -40876540 + (GAAA)n Simple_repeat Simple_repeat 2 72 0 287 303 139 0 chr20 31277419 31277541 -40876341 + L2 LINE L2 3172 3310 -3 252 282 28 0 chr20 31278621 31278692 -40875190 + MIR SINE MIR 117 189 -73 614 284 34 38 chr20 31279348 31279587 -40874295 - MIR SINE MIR -10 252 15 411 267 139 22 chr20 31280842 31281022 -40872860 + MER63A DNA MER1_type 1 201 -9 2513 50 0 0 chr20 31281264 31281561 -40872321 + AluY SINE Alu 3 299 -12 321 242 91 0 chr20 31283230 31283329 -40870553 - MIR SINE MIR -65 143 36 280 250 265 1 chr20 31284080 31284213 -40869669 - MIR3 SINE MIR -19 189 19 1441 162 64 17 chr20 31284631 31284928 -40868954 + AluJb SINE Alu 1 311 -1 232 262 47 56 chr20 31285471 31285578 -40868304 - MIR SINE MIR -61 147 42 2014 123 0 46 chr20 31286202 31286526 -40867356 - AluSx SINE Alu -3 309 1 196 248 21 90 chr20 31287542 31287687 -40866195 + L2 LINE L2 2921 3055 -217 245 204 0 0 chr20 31287728 31287772 -40866110 + MLT1I LTR MaLR 359 402 -7 256 276 313 0 chr20 31288704 31288838 -40865044 - MER5B DNA MER1_type 0 178 3 413 221 98 8 chr20 31289992 31290114 -40863768 - MIR SINE MIR -104 158 26 345 149 45 15 chr20 31290486 31290553 -40863329 + Charlie8 DNA MER1_type 86 154 -2263 233 204 37 0 chr20 31290680 31290734 -40863148 + MER5A DNA MER1_type 47 102 -87 404 212 233 0 chr20 31291757 31291903 -40861979 - MER5A DNA MER1_type 0 189 10 248 242 0 11 chr20 31292427 31292518 -40861364 + GA-rich Low_complexity Low_complexity 3 92 0 1917 135 3 7 chr20 31293346 31293650 -40860232 - AluJo SINE Alu -9 303 1 438 232 195 12 chr20 31294842 31295006 -40858876 + MLT1G LTR MaLR 202 395 -195 1151 170 62 1 chr20 31295029 31295454 -40858428 + LTR54 LTR ERV1 1 510 0 609 244 8 0 chr20 31295454 31295581 -40858301 + MLT1G LTR MaLR 463 590 0 910 220 21 5 chr20 31295820 31296006 -40857876 - MER5A DNA MER1_type 0 189 1 25 31 0 0 chr20 31297808 31297840 -40856042 + GC_rich Low_complexity Low_complexity 1 32 0 328 250 0 0 chr20 31299212 31299284 -40854598 + MIR SINE MIR 79 150 -112 832 178 33 33 chr20 31299768 31299948 -40853934 - FRAM SINE Alu -2 174 1 258 294 24 0 chr20 31300010 31300095 -40853787 - MIR SINE MIR -73 135 49 569 285 224 11 chr20 31300325 31300700 -40853182 + MLT1G1 LTR MaLR 141 595 0 1081 283 191 14 chr20 31300733 31301373 -40852509 + L2 LINE L2 2055 2807 -507 430 207 201 6 chr20 31301379 31301529 -40852353 + MER5A DNA MER1_type 6 189 0 * 556 270 113 35 chr20 31301529 31301894 -40851988 + L2 LINE L2 2827 3220 -93 216 301 97 0 chr20 31302551 31302654 -40851228 - MIR SINE MIR -87 175 63 406 231 69 103 chr20 31304661 31304864 -40849018 + MIR3 SINE MIR 13 208 0 606 12 36 0 chr20 31306524 31306607 -40847275 + (TAGA)n Simple_repeat Simple_repeat 4 89 0 351 272 129 45 chr20 31307093 31307328 -40846554 + L1MCa LINE L1 2234 2488 -3940 492 96 44 22 chr20 31307375 31307511 -40846371 + (CA)n Simple_repeat Simple_repeat 2 140 0 662 120 44 25 chr20 31307523 31308183 -40845699 + (CA)n Simple_repeat Simple_repeat 1 672 0 486 167 49 6 chr20 31308195 31308357 -40845525 + (CA)n Simple_repeat Simple_repeat 2 170 0 407 301 50 10 chr20 31308371 31308650 -40845232 + L1M2 LINE L1 1265 1787 -4429 369 283 33 0 chr20 31308626 31308746 -40845136 + L1MEc LINE L1 1547 1670 -4726 * 23 33 0 0 chr20 31309216 31309246 -40844636 + AT_rich Low_complexity Low_complexity 1 30 0 348 274 169 20 chr20 31309246 31309600 -40844282 + L1MEc LINE L1 2200 2606 -3609 2625 149 10 0 chr20 31310199 31310596 -40843286 - MER57A LTR ERV1 0 403 3 1527 131 54 0 chr20 31310926 31311186 -40842696 + L1MA8 LINE L1 6012 6285 -6 856 177 20 0 chr20 31311611 31311758 -40842124 + FRAM SINE Alu 1 148 -28 245 142 164 0 chr20 31312406 31312480 -40841402 + MLT1H1 LTR MaLR 437 527 -28 370 252 48 83 chr20 31312503 31312671 -40841211 - L1M4 LINE L1 -1104 5042 4881 44 0 0 0 chr20 31313505 31313549 -40840333 + AT_rich Low_complexity Low_complexity 1 44 0 559 257 101 35 chr20 31313736 31313993 -40839889 + MLT1L LTR MaLR 14 287 -328 531 235 102 27 chr20 31314401 31314588 -40839294 - MIR SINE MIR 0 262 62 212 51 0 51 chr20 31316840 31316879 -40837003 + (TAAAAA)n Simple_repeat Simple_repeat 1 37 0 233 305 0 0 chr20 31318680 31318758 -40835124 + (TATATG)n Simple_repeat Simple_repeat 1 78 0 820 244 28 52 chr20 31319919 31320169 -40833713 - MIR SINE MIR -6 256 13 328 311 128 18 chr20 31320254 31320418 -40833464 + MER5A DNA MER1_type 7 188 -1 620 225 165 32 chr20 31320634 31320919 -40832963 + MER33 DNA MER1_type 2 324 0 210 37 0 0 chr20 31322629 31322656 -40831226 + (CACCC)n Simple_repeat Simple_repeat 5 31 0 2201 90 10 0 chr20 31325542 31325843 -40828039 + AluSp SINE Alu 3 306 -7 246 325 90 52 chr20 31325861 31326150 -40827732 + LTR16C LTR ERVL 24 323 -168 262 256 172 62 chr20 31326184 31326428 -40827454 + LTR16A1 LTR ERVL 6 271 -179 664 291 13 43 chr20 31326950 31327180 -40826702 - MIR SINE MIR -4 258 36 1756 176 12 95 chr20 31327263 31327695 -40826187 + MSTD LTR MaLR 1 396 0 216 97 0 0 chr20 31327816 31327847 -40826035 + (GAAA)n Simple_repeat Simple_repeat 2 32 0 540 219 128 26 chr20 31328548 31328786 -40825096 - MLT1F1 LTR MaLR 0 555 282 242 246 31 0 chr20 31328813 31328878 -40825004 - MLT1F1 LTR MaLR -402 188 122 629 216 131 27 chr20 31328893 31329115 -40824767 + ORSL DNA AcHobo 4 248 -27 666 253 51 0 chr20 31329538 31329716 -40824166 + MER5A DNA MER1_type 1 187 -2 369 317 109 10 chr20 31329974 31330176 -40823706 - MIR SINE MIR -4 258 37 244 162 44 15 chr20 31330430 31330498 -40823384 + CT-rich Low_complexity Low_complexity 2 71 0 410 205 62 0 chr20 31331501 31331613 -40822269 + LTR16C LTR ERVL 372 490 -1 194 283 71 0 chr20 31331614 31331713 -40822169 + L2 LINE L2 3153 3258 -14 397 76 33 130 chr20 31332699 31332791 -40821091 - MER4B LTR ERV1 -527 83 1 4421 232 17 29 chr20 31332806 31333412 -40820470 + L1MC2 LINE L1 2453 3065 -3081 2156 123 3 0 chr20 31333412 31333722 -40820160 + AluSx SINE Alu 1 311 -1 4421 232 17 29 chr20 31333722 31334463 -40819419 + L1MC2 LINE L1 3065 3784 -2362 1079 184 18 58 chr20 31334464 31334741 -40819141 + AluJo SINE Alu 2 267 -45 2017 248 43 12 chr20 31334742 31334792 -40819090 + L1 LINE L1 2037 2084 -4062 2117 114 0 7 chr20 31334792 31335091 -40818791 + AluSx SINE Alu 1 297 -15 2017 248 43 12 chr20 31335091 31335811 -40818071 + L1 LINE L1 2084 4026 -2120 369 172 0 16 chr20 31335837 31335901 -40817981 - MSTA-int LTR MaLR -1588 63 1 1965 157 123 23 chr20 31335901 31336290 -40817592 - MSTA LTR MaLR 0 428 1 302 68 0 0 chr20 31336290 31336334 -40817548 + L1MA3 LINE L1 6262 6305 0 5046 207 33 16 chr20 31336344 31338416 -40815466 + L1MC2 LINE L1 4013 6117 -227 805 160 8 0 chr20 31338417 31338542 -40815340 + FLAM_C SINE Alu 1 126 -17 1096 118 56 6 chr20 31338554 31338732 -40815150 + L1MC2 LINE L1 6107 6293 -51 284 259 93 19 chr20 31338764 31338872 -40815010 - L1MEd LINE L1 -5908 211 96 2287 62 10 7 chr20 31339027 31339334 -40814548 + AluY SINE Alu 1 308 -3 942 163 59 68 chr20 31341062 31341283 -40812599 + MER20 DNA MER1_type 1 219 0 335 164 15 30 chr20 31341995 31342062 -40811820 - LTR67 LTR ERVL -8 549 484 2272 165 25 42 chr20 31342078 31342146 -40811736 - MSTB LTR MaLR -2 424 356 2005 104 0 17 chr20 31342146 31342487 -40811395 - AluSx SINE Alu 0 336 1 2272 165 25 42 chr20 31342487 31342848 -40811034 - MSTB LTR MaLR -70 356 1 2650 132 90 0 chr20 31343340 31343786 -40810096 + LTR19A LTR ERV1 1 486 0 232 261 14 14 chr20 31345310 31345379 -40808503 + MLT1G1 LTR MaLR 525 593 -2 388 245 161 7 chr20 31345389 31345532 -40808350 - Charlie2b DNA MER1_type -107 2675 2511 41708 69 2 3 chr20 31345532 31351323 -40802559 + L1PA5 LINE L1 4 5784 -370 7260 35 0 0 chr20 31351322 31352183 -40801699 - L1PA3 LINE L1 -1078 5068 4208 * 7873 18 6 0 chr20 31352183 31353263 -40800619 + L1PA3 LINE L1 5071 6155 0 2990 67 0 3 chr20 31353263 31353675 -40800207 + L1PA5 LINE L1 5770 6180 0 2400 237 95 55 chr20 31353886 31354086 -40799796 - Charlie2b DNA MER1_type -323 2539 2349 2015 124 3 0 chr20 31354086 31354384 -40799498 + AluSg SINE Alu 1 299 -11 2400 237 95 55 chr20 31354384 31354727 -40799155 - Charlie2b DNA MER1_type -513 2349 2021 1878 152 0 0 chr20 31354727 31355029 -40798853 - AluJb SINE Alu -10 302 1 2400 237 95 55 chr20 31355029 31355759 -40798123 - Charlie2b DNA MER1_type -841 2021 1155 1198 125 0 0 chr20 31355825 31356001 -40797881 - AluSg/x SINE Alu -5 305 130 420 264 0 23 chr20 31356047 31356176 -40797706 - Charlie2b DNA MER1_type -1762 1020 895 242 194 58 58 chr20 31356353 31356392 -40797490 + LTR16A1 LTR ERVL 22 60 -397 369 0 0 0 chr20 31356392 31356433 -40797449 + (CA)n Simple_repeat Simple_repeat 1 41 0 242 194 58 58 chr20 31356433 31356496 -40797386 + LTR16A1 LTR ERVL 59 124 -333 385 183 200 0 chr20 31356627 31356747 -40797135 + LTR16A1 LTR ERVL 314 457 0 323 159 16 0 chr20 31356797 31356860 -40797022 + L1ME1 LINE L1 6098 6161 -5 359 317 81 38 chr20 31357857 31358043 -40795839 + L1ME LINE L1 5631 5824 -297 282 316 123 42 chr20 31358048 31358472 -40795410 + HAL1 LINE L1 6 463 -2044 574 235 0 8 chr20 31358708 31359196 -40794686 + (CA)n Simple_repeat Simple_repeat 1 483 0 2584 236 100 71 chr20 31359214 31360625 -40793257 + HAL1 LINE L1 762 2213 -294 759 287 190 19 chr20 31360790 31361159 -40792723 - LTR16C LTR ERVL -11 480 49 542 231 153 100 chr20 31361684 31362142 -40791740 + L1MEd LINE L1 417 898 -5221 833 168 7 0 chr20 31362164 31362301 -40791581 - AluJo SINE Alu -174 138 1 531 302 82 15 chr20 31362338 31362666 -40791216 + L1MEd LINE L1 904 1253 -4866 512 246 80 11 chr20 31362677 31362864 -40791018 + HAL1 LINE L1 1424 1623 -884 4105 197 35 30 chr20 31362926 31363021 -40790861 + L1M3 LINE L1 4238 4331 -1849 1344 172 90 11 chr20 31363021 31363288 -40790594 + AluJb SINE Alu 4 291 -21 4105 197 35 30 chr20 31363288 31364544 -40789338 + L1M3 LINE L1 4331 5597 -583 22044 148 25 16 chr20 31364544 31364969 -40788913 + ERVL LTR ERVL 1926 2346 -3418 1684 167 10 10 chr20 31364969 31365268 -40788614 + AluJo SINE Alu 1 299 -13 22044 148 25 16 chr20 31365268 31368433 -40785449 + ERVL LTR ERVL 2346 5548 -216 1348 181 104 29 chr20 31368484 31368793 -40785089 - MLT1A1 LTR MaLR -33 332 1 760 152 171 25 chr20 31368815 31368973 -40784909 - MER21B LTR ERV1 -682 181 1 292 86 86 17 chr20 31368973 31369031 -40784851 + L1MB7 LINE L1 6117 6178 -6 485 309 40 24 chr20 31370080 31370298 -40783584 + MIR SINE MIR 4 223 -39 340 298 34 34 chr20 31371020 31371198 -40782684 + LTR16C LTR ERVL 244 421 -70 290 223 96 11 chr20 31371610 31371704 -40782178 - LTR16A1 LTR ERVL -9 448 347 1892 171 30 38 chr20 31371960 31372300 -40781582 - MLT1A1 LTR MaLR 0 365 27 1912 244 102 4 chr20 31372300 31372792 -40781090 - MER87 LTR ERV1 0 541 2 1892 171 30 38 chr20 31372792 31372819 -40781063 - MLT1A1 LTR MaLR -338 27 1 209 319 36 48 chr20 31373508 31373674 -40780208 + L2 LINE L2 2141 2304 -1010 294 310 70 0 chr20 31374101 31374230 -40779652 + L2 LINE L2 2957 3094 -178 416 321 101 6 chr20 31374324 31374492 -40779390 + MIR SINE MIR 68 251 -11 199 179 0 26 chr20 31375624 31375663 -40778219 + L3 LINE CR1 1528 1565 -12 184 121 30 0 chr20 31375634 31375667 -40778215 + MIR3 SINE MIR 163 196 -12 * 1726 234 116 4 chr20 31376458 31376575 -40777307 - MLT1F LTR MaLR -6 536 434 2098 160 23 28 chr20 31376575 31376969 -40776913 + MSTD LTR MaLR 1 392 -4 1726 234 116 4 chr20 31376969 31377333 -40776549 - MLT1F LTR MaLR -108 434 1 453 267 87 38 chr20 31377767 31378029 -40775853 - L1MC4a LINE L1 -297 5824 5656 276 330 28 23 chr20 31378038 31378214 -40775668 - L1M4 LINE L1 -3310 2836 2660 761 270 83 0 chr20 31378379 31378583 -40775299 - MIR SINE MIR -8 254 34 809 196 169 89 chr20 31378634 31378742 -40775140 - HsTC2 DNA Tc2 -44 1854 1756 1789 122 3 31 chr20 31378742 31379028 -40774854 - AluJb SINE Alu -22 290 13 809 196 169 89 chr20 31379028 31379322 -40774560 - HsTC2 DNA Tc2 -142 1756 1244 926 304 182 16 chr20 31381090 31381606 -40772276 - L1ME3A LINE L1 -9 6161 5560 197 136 0 23 chr20 31382043 31382087 -40771795 + (TC)n Simple_repeat Simple_repeat 2 44 0 337 252 19 39 chr20 31382124 31382227 -40771655 - MIR SINE MIR -82 180 80 356 201 149 15 chr20 31383923 31384057 -40769825 - L1ME4a LINE L1 -2 6119 5968 303 212 30 10 chr20 31384172 31384271 -40769611 + L1ME4a LINE L1 6002 6102 -19 275 265 0 0 chr20 31384291 31384359 -40769523 - L1ME4a LINE L1 -289 5832 5765 594 236 112 39 chr20 31384381 31384559 -40769323 + MER69 DNA AcHobo 62 252 -974 584 262 42 143 chr20 31385041 31385473 -40768409 + HAL1b LINE L1 75 462 -886 1471 182 52 12 chr20 31386084 31386414 -40767468 + L1MD3 LINE L1 7653 7995 0 470 295 110 17 chr20 31387376 31387722 -40766160 + LTR16C LTR ERVL 104 481 -10 402 223 74 27 chr20 31389317 31389481 -40764401 + MIR SINE MIR 1 171 -62 1642 162 7 7 chr20 31389729 31390019 -40763863 + AluJo SINE Alu 2 291 -21 2360 78 7 3 chr20 31391169 31391477 -40762405 + AluSx SINE Alu 1 309 -3 1510 157 86 7 chr20 31391620 31391900 -40761982 + AluSq SINE Alu 1 302 -11 2140 181 63 88 chr20 31392049 31392730 -40761152 - MER4A LTR ERV1 0 664 1 2379 87 0 0 chr20 31393150 31393459 -40760423 - AluY SINE Alu -2 309 1 1963 215 107 14 chr20 31393761 31394329 -40759553 + L1MC4 LINE L1 7199 7819 -223 6684 211 54 31 chr20 31394337 31394881 -40759001 - L1MB7 LINE L1 -9 6175 5645 1572 188 10 10 chr20 31394881 31395189 -40758693 - AluJo SINE Alu -4 308 1 6684 211 54 31 chr20 31395189 31395278 -40758604 - L1MB7 LINE L1 -539 5645 5560 2024 138 6 6 chr20 31395278 31395590 -40758292 - AluSx SINE Alu 0 312 1 6684 211 54 31 chr20 31395590 31396693 -40757189 - L1MB7 LINE L1 -624 5560 4485 2396 3 79 10 chr20 31396693 31396983 -40756899 - AluY SINE Alu -1 310 1 6684 211 54 31 chr20 31396983 31397003 -40756879 - L1MB7 LINE L1 -1699 4485 4467 1518 163 37 0 chr20 31397003 31397273 -40756609 - AluJo SINE Alu -30 282 3 6684 211 54 31 chr20 31397273 31397646 -40756236 - L1MB7 LINE L1 -1717 4467 4104 1841 48 4 0 chr20 31397646 31397875 -40756007 - L1PA4 LINE L1 0 6155 5926 6684 211 54 31 chr20 31397875 31398147 -40755735 - L1MB7 LINE L1 -2080 4104 3840 1376 190 68 60 chr20 31398147 31398532 -40755350 + MLT1B LTR MaLR 1 388 -2 6684 211 54 31 chr20 31398532 31398691 -40755191 - L1MB7 LINE L1 -2344 3840 3566 844 164 26 42 chr20 31399330 31399519 -40754363 - AluJo SINE Alu -126 186 1 218 176 11 66 chr20 31399973 31400064 -40753818 + (ATAAG)n Simple_repeat Simple_repeat 3 88 0 2585 177 10 73 chr20 31402488 31402657 -40751225 - L1MA10 LINE L1 0 6334 6156 396 0 0 0 chr20 31402657 31402701 -40751181 + (TTA)n Simple_repeat Simple_repeat 2 45 0 1813 143 7 0 chr20 31402701 31402981 -40750901 - AluSx SINE Alu -30 282 1 2585 177 10 73 chr20 31402981 31403252 -40750630 - L1MA10 LINE L1 -177 6157 5939 1535 191 20 92 chr20 31403252 31403645 -40750237 + MLT1A1 LTR MaLR 1 365 0 2585 177 10 73 chr20 31403645 31403806 -40750076 - L1MA10 LINE L1 -395 5939 5769 3744 104 32 0 chr20 31403811 31404341 -40749541 - MER41B LTR ERV1 -88 547 1 1299 124 0 0 chr20 31404341 31404518 -40749364 - MER41B-int LTR ERV1 0 5946 5770 * 7512 99 12 20 chr20 31404516 31404901 -40748981 - MER41B-int LTR ERV1 -544 5402 5015 2052 127 0 0 chr20 31404901 31405192 -40748690 + AluSg SINE Alu 1 291 -19 7512 99 12 20 chr20 31405192 31405919 -40747963 - MER41B-int LTR ERV1 -931 5015 4299 32088 107 12 61 chr20 31405927 31410481 -40743401 + L1PA7 LINE L1 10 4147 -2007 2207 109 3 0 chr20 31410481 31410792 -40743090 + AluSp SINE Alu 2 313 0 32088 107 12 61 chr20 31410792 31412697 -40741185 + L1PA7 LINE L1 4147 6143 -11 3157 135 54 30 chr20 31412707 31413351 -40740531 - MER41B-int LTR ERV1 -1510 3505 2846 5032 114 31 6 chr20 31413351 31414147 -40739735 - MER57-int LTR ERV1 -3941 3596 2781 837 113 42 14 chr20 31414161 31414303 -40739579 - MER57-int LTR ERV1 -4174 2089 1944 * 3663 118 31 17 chr20 31414282 31414860 -40739022 - MER57-int LTR ERV1 -4171 1775 1190 614 62 0 0 chr20 31414855 31414935 -40738947 - MER57-int LTR ERV1 -5144 802 723 * 1503 244 83 5 chr20 31414956 31415365 -40738517 - L1M4b LINE L1 -6416 443 3 316 263 58 66 chr20 31415456 31415593 -40738289 - MIR SINE MIR -63 199 64 234 0 0 0 chr20 31415653 31415679 -40738203 + (TG)n Simple_repeat Simple_repeat 2 27 0 1842 155 23 23 chr20 31415795 31416104 -40737778 + AluJo SINE Alu 1 309 -3 247 258 16 0 chr20 31416316 31416378 -40737504 + MIR3 SINE MIR 143 205 -3 273 190 17 0 chr20 31416521 31416579 -40737303 + LTR16C LTR ERVL 195 253 -238 481 244 111 15 chr20 31417189 31417260 -40736622 + MIR SINE MIR 19 82 -180 1901 160 6 26 chr20 31417260 31417573 -40736309 - AluJb SINE Alu -5 307 1 481 244 111 15 chr20 31417573 31417636 -40736246 + MIR SINE MIR 82 166 -96 1591 217 78 80 chr20 31417647 31418145 -40735737 + L1MC4 LINE L1 7317 7813 -229 218 310 62 55 chr20 31418358 31418503 -40735379 - L2 LINE L2 -5 3267 3122 296 184 11 69 chr20 31418711 31418798 -40735084 + AluSp/q SINE Alu 222 303 0 31 0 0 0 chr20 31418800 31418831 -40735051 + AT_rich Low_complexity Low_complexity 1 31 0 260 197 49 16 chr20 31419028 31419089 -40734793 + MIR3 SINE MIR 143 205 -3 242 279 15 0 chr20 31419235 31419303 -40734579 + LTR16C LTR ERVL 185 253 -238 288 127 365 0 chr20 31419414 31419477 -40734405 - AluJ SINE Alu -49 253 168 626 167 19 0 chr20 31419478 31419586 -40734296 - AluJ SINE Alu -201 111 2 22 56 0 0 chr20 31419950 31419986 -40733896 + AT_rich Low_complexity Low_complexity 1 36 0 259 281 146 0 chr20 31420041 31420130 -40733752 - L2 LINE L2 -10 3303 3202 353 311 80 34 chr20 31420335 31420573 -40733309 + L1M4 LINE L1 2615 2863 -3283 729 123 0 0 chr20 31421018 31421132 -40732750 + L1MA4 LINE L1 6175 6288 -12 37044 84 8 8 chr20 31421133 31427270 -40726612 - L1PA6 LINE L1 -6 6148 11 331 304 18 12 chr20 31427283 31427451 -40726431 + L1M4 LINE L1 2869 3037 -3109 584 243 142 9 chr20 31427862 31428080 -40725802 + LTR65 LTR ERV1 278 524 -145 603 275 174 28 chr20 31429217 31429938 -40723944 + L1M4 LINE L1 3028 3895 -2251 2335 94 3 7 chr20 31429938 31430236 -40723646 + AluSx SINE Alu 1 297 -15 603 275 174 28 chr20 31430236 31430368 -40723514 + L1M4 LINE L1 3895 4006 -2140 704 221 115 1 chr20 31430881 31431158 -40722724 - LTR16C LTR ERVL 0 491 150 295 306 24 0 chr20 31431654 31431739 -40722143 - LTR16C LTR ERVL 0 491 405 180 0 0 0 chr20 31431740 31431760 -40722122 + (GA)n Simple_repeat Simple_repeat 1 20 0 2649 178 40 2 chr20 31431909 31432364 -40721518 - MER70A LTR ERVL 0 472 1 405 230 59 89 chr20 31432566 31432701 -40721181 - L2 LINE L2 -28 3285 3155 2214 189 35 115 chr20 31432764 31432984 -40720898 + LTR8 LTR ERV1 31 267 -424 2507 86 0 0 chr20 31432984 31433288 -40720594 + AluSq SINE Alu 1 304 -9 2214 189 35 115 chr20 31433288 31433607 -40720275 + LTR8 LTR ERV1 267 500 -191 1925 117 8 4 chr20 31433607 31433871 -40720011 + AluSx SINE Alu 27 291 -21 2214 189 35 115 chr20 31433871 31434049 -40719833 + LTR8 LTR ERV1 500 691 0 351 257 186 44 chr20 31434051 31434234 -40719648 - L2 LINE L2 -174 3139 2931 623 279 60 40 chr20 31434370 31434717 -40719165 + L1MC/D LINE L1 5401 5754 -2054 2046 120 34 0 chr20 31435207 31435498 -40718384 + AluSx SINE Alu 1 301 -11 22 35 0 0 chr20 31436045 31436074 -40717808 + GC_rich Low_complexity Low_complexity 1 29 0 28 29 0 0 chr20 31436157 31436192 -40717690 + GC_rich Low_complexity Low_complexity 1 35 0 2186 113 3 23 chr20 31438479 31438779 -40715103 + AluSx SINE Alu 1 294 -18 213 335 65 20 chr20 31439154 31439354 -40714528 + L2 LINE L2 2305 2513 -801 3385 197 64 14 chr20 31439772 31440785 -40713097 - L1MB3 LINE L1 -7 6412 5314 5354 216 100 31 chr20 31440786 31441971 -40711911 - L1MB3 LINE L1 -2702 3680 2579 2142 136 111 40 chr20 31441971 31442043 -40711839 - Tigger2a DNA MER2_type -2274 434 369 1490 139 0 9 chr20 31442043 31442266 -40711616 - AluJo SINE Alu -54 258 38 2142 136 111 40 chr20 31442266 31442598 -40711284 - Tigger2a DNA MER2_type -2339 369 1 5354 216 100 31 chr20 31442598 31444194 -40709688 - L1MB3 LINE L1 -3803 2579 777 338 313 39 16 chr20 31444213 31444341 -40709541 - L1MB3 LINE L1 -5719 665 535 21 0 0 0 chr20 31444754 31444775 -40709107 + AT_rich Low_complexity Low_complexity 1 21 0 335 321 130 13 chr20 31445413 31445805 -40708077 - L2 LINE L2 -60 3253 2816 322 319 104 14 chr20 31447084 31447228 -40706654 + MIR SINE MIR 35 191 -71 301 274 148 7 chr20 31447750 31447885 -40705997 - MER5A DNA MER1_type -22 167 14 1006 119 0 0 chr20 31448604 31448738 -40705144 + AluSp/q SINE Alu 156 289 -24 24 0 0 0 chr20 31448756 31448780 -40705102 + AT_rich Low_complexity Low_complexity 1 24 0 1375 121 5 0 chr20 31449190 31449381 -40704501 - AluSg/x SINE Alu 0 312 118 2508 70 0 10 chr20 31449381 31449695 -40704187 - AluY SINE Alu 0 311 1 830 155 8 0 chr20 31449723 31449852 -40704030 + FLAM_A SINE Alu 1 130 -3 60 15 0 0 chr20 31449852 31449919 -40703963 + AT_rich Low_complexity Low_complexity 1 67 0 1673 174 52 14 chr20 31450649 31450936 -40702946 + AluJb SINE Alu 1 298 -14 2206 108 0 14 chr20 31450945 31451240 -40702642 + AluSx SINE Alu 1 291 -21 252 226 60 68 chr20 31451909 31452042 -40701840 - L1MC/D LINE L1 -1976 5832 5701 1490 212 15 4 chr20 31452100 31452374 -40701508 - AluJb SINE Alu -18 294 18 1609 174 7 30 chr20 31452858 31452982 -40700900 + AluJo SINE Alu 1 126 -186 2466 88 0 0 chr20 31452982 31453290 -40700592 - AluY SINE Alu -3 308 1 1609 174 7 30 chr20 31453290 31453469 -40700413 + AluJo SINE Alu 126 297 -15 1966 168 0 0 chr20 31453953 31454251 -40699631 + AluJo SINE Alu 1 298 -14 732 74 11 0 chr20 31454984 31455079 -40698803 + HY3 scRNA scRNA 2 97 -4 236 148 0 56 chr20 31457994 31458048 -40695834 + (TCC)n Simple_repeat Simple_repeat 3 53 0 215 135 0 77 chr20 31458083 31458135 -40695747 + (TCC)n Simple_repeat Simple_repeat 3 50 0 193 54 0 54 chr20 31458172 31458209 -40695673 + (TCC)n Simple_repeat Simple_repeat 3 37 0 193 54 0 54 chr20 31458258 31458295 -40695587 + (TCC)n Simple_repeat Simple_repeat 3 37 0 225 137 0 59 chr20 31458337 31458388 -40695494 + (TCC)n Simple_repeat Simple_repeat 3 50 0 218 304 89 0 chr20 31458584 31458663 -40695219 + L2 LINE L2 3183 3268 -4 1894 159 3 13 chr20 31459165 31459466 -40694416 - AluSx SINE Alu -14 298 1 199 260 188 10 chr20 31461191 31461287 -40692595 + MIR SINE MIR 117 229 -33 237 341 173 8 chr20 31462264 31462519 -40691363 - L2 LINE L2 -189 3124 2828 182 272 152 11 chr20 31462664 31462756 -40691126 + MIR SINE MIR 48 152 -56 251 229 202 27 chr20 31468160 31468348 -40685534 - L1MC/D LINE L1 -2333 5475 5255 1993 150 7 0 chr20 31468536 31468829 -40685053 - AluSx SINE Alu -13 299 5 265 306 62 14 chr20 31468836 31468927 -40684955 - MARNA DNA Mariner -197 389 287 1992 114 13 45 chr20 31468927 31469235 -40684647 + AluSq SINE Alu 1 298 -15 265 306 62 14 chr20 31469235 31469287 -40684595 - MARNA DNA Mariner -299 287 239 2282 82 0 24 chr20 31469292 31469585 -40684297 + AluSg SINE Alu 1 286 -24 300 253 159 44 chr20 31469733 31469915 -40683967 + L3 LINE CR1 1159 1361 -216 2285 97 0 0 chr20 31470946 31471236 -40682646 + AluSg SINE Alu 1 290 -20 2017 152 14 0 chr20 31471251 31471540 -40682342 + AluSg SINE Alu 3 295 -15 889 206 6 0 chr20 31471549 31471729 -40682153 - L1ME LINE L1 -401 5763 5583 478 48 0 0 chr20 31471736 31471798 -40682084 + AluSc SINE Alu 6 67 -243 1267 152 91 117 chr20 31471798 31472258 -40681624 + LTR7 LTR ERV1 1 448 -2 1953 81 0 0 chr20 31472260 31472494 -40681388 + AluSc SINE Alu 63 296 -13 371 203 0 0 chr20 31472495 31472564 -40681318 - L1ME LINE L1 -583 5583 5515 2244 114 0 16 chr20 31472678 31472985 -40680897 + AluSg SINE Alu 1 302 -8 1157 97 26 0 chr20 31472985 31473140 -40680742 + AluSg/x SINE Alu 134 292 -20 1190 207 113 12 chr20 31473141 31473470 -40680412 + L1MB7 LINE L1 5823 6184 0 2361 225 37 77 chr20 31474090 31474123 -40679759 - L1ME2 LINE L1 -2 6162 6129 7860 80 6 2 chr20 31474123 31475088 -40678794 - LTR5 LTR ERVK 0 969 1 2361 225 37 77 chr20 31475088 31475655 -40678227 - L1ME2 LINE L1 -35 6129 5541 2429 68 0 3 chr20 31475655 31475950 -40677932 + AluY SINE Alu 1 294 -17 2361 225 37 77 chr20 31475950 31476100 -40677782 - L1ME2 LINE L1 -623 5541 5441 716 179 8 0 chr20 31476100 31476223 -40677659 - FLAM_A SINE Alu -9 124 1 2361 225 37 77 chr20 31476223 31476253 -40677629 - L1ME2 LINE L1 -723 5441 5411 1290 206 71 0 chr20 31476458 31476740 -40677142 - MER58B DNA MER1_type -7 334 33 1904 107 0 4 chr20 31477477 31477721 -40676161 + AluSq SINE Alu 1 243 -70 1064 245 124 0 chr20 31478184 31478507 -40675375 - L1ME3A LINE L1 -260 5910 5548 643 224 18 174 chr20 31478899 31479238 -40674644 + MLT1A1 LTR MaLR 7 292 -73 2367 133 53 17 chr20 31479240 31479653 -40674229 - MSTA LTR MaLR 0 428 1 2344 86 41 0 chr20 31480687 31480978 -40672904 + AluSq SINE Alu 1 303 -10 520 278 37 16 chr20 31481195 31481404 -40672478 - L1MC4 LINE L1 -426 7462 7170 313 208 54 107 chr20 31481434 31481531 -40672351 - L1MC4 LINE L1 -895 7147 7059 8104 68 3 4 chr20 31481531 31482501 -40671381 + LTR5 LTR ERVK 1 969 0 313 208 54 107 chr20 31482501 31482552 -40671330 - L1MC4 LINE L1 -983 7059 7007 1955 171 0 3 chr20 31483032 31483336 -40670546 + AluJb SINE Alu 1 303 -9 1182 233 81 83 chr20 31483705 31483958 -40669924 - MER34C LTR ERV1 -6 579 327 1624 201 99 8 chr20 31483958 31484321 -40669561 - MSTD LTR MaLR 0 396 1 1182 233 81 83 chr20 31484321 31484599 -40669283 - MER34C LTR ERV1 -258 327 49 181 176 0 0 chr20 31484643 31484677 -40669205 + L2 LINE L2 2923 2956 -358 2011 115 54 0 chr20 31484692 31484971 -40668911 - AluSx SINE Alu -18 294 1 2249 122 3 0 chr20 31485090 31485401 -40668481 + AluSx SINE Alu 1 312 0 2381 147 40 11 chr20 31485633 31486104 -40667778 - MER31A LTR ERV1 0 485 1 250 202 0 77 chr20 31486283 31486387 -40667495 - L1ME4a LINE L1 -38 6083 5988 299 193 12 60 chr20 31486393 31486476 -40667406 - MER3 DNA MER1_type 0 209 131 410 250 132 7 chr20 31486645 31486797 -40667085 + MIR SINE MIR 34 204 -58 254 311 68 0 chr20 31486929 31487032 -40666850 - L1ME LINE L1 -462 5659 5550 589 267 115 16 chr20 31487328 31487858 -40666024 - LTR65 LTR ERV1 -6 663 14 222 210 0 49 chr20 31488266 31488347 -40665535 + (CCCCG)n Simple_repeat Simple_repeat 2 78 0 2305 87 0 7 chr20 31490136 31490434 -40663448 - AluSg SINE Alu -14 296 1 310 285 14 48 chr20 31491588 31491730 -40662152 + MIR3 SINE MIR 58 194 -14 1910 207 99 94 chr20 31492673 31493407 -40660475 - MER21B LTR ERV1 -125 738 1 738 181 80 27 chr20 31493439 31493627 -40660255 + MLT2D LTR ERVL 217 414 0 1862 109 69 0 chr20 31493655 31493902 -40659980 + AluSq SINE Alu 1 264 -49 327 49 0 0 chr20 31493909 31493950 -40659932 + (TAAAA)n Simple_repeat Simple_repeat 3 43 0 842 241 39 73 chr20 31493982 31494158 -40659724 - L1MD3 LINE L1 -12 8028 7876 1649 111 0 0 chr20 31494158 31494374 -40659508 + AluSg/x SINE Alu 84 299 -13 842 241 39 73 chr20 31494374 31494538 -40659344 - L1MD3 LINE L1 -164 7876 7708 23 33 0 0 chr20 31494623 31494653 -40659229 + AT_rich Low_complexity Low_complexity 1 30 0 194 318 129 12 chr20 31495139 31495224 -40658658 + L3 LINE CR1 1480 1574 -3 2324 101 3 0 chr20 31496022 31496318 -40657564 - AluSq SINE Alu -16 297 1 843 113 0 0 chr20 31496696 31496811 -40657071 + AluSg/x SINE Alu 196 310 0 304 200 67 48 chr20 31497292 31497397 -40656485 - MIR3 SINE MIR -95 113 7 749 165 0 8 chr20 31497833 31497960 -40655922 + FLAM_A SINE Alu 1 126 -7 329 272 0 56 chr20 31498597 31498722 -40655160 - MLT1F1 LTR MaLR -447 120 3 373 238 48 0 chr20 31498726 31498810 -40655072 - L1MD3 LINE L1 -719 7276 7189 321 301 10 10 chr20 31499134 31499237 -40654645 - MIR SINE MIR -148 114 12 33838 75 46 1 chr20 31500786 31505525 -40648357 + L1P LINE L1 3 4953 -1193 1757 185 17 53 chr20 31505524 31505878 -40648004 - L1M3 LINE L1 -538 5645 5306 * 2507 80 0 3 chr20 31505878 31506180 -40647702 - AluY SINE Alu -10 301 1 1757 185 17 53 chr20 31506180 31506303 -40647579 - L1M3 LINE L1 -877 5306 5180 866 127 0 0 chr20 31506318 31506436 -40647446 - AluSq/x SINE Alu -195 118 1 379 176 11 0 chr20 31506436 31506527 -40647355 - L1M3 LINE L1 -959 5187 5096 * 2067 182 124 15 chr20 31506522 31507719 -40646163 + L1MB7 LINE L1 4839 6169 -15 2005 153 10 10 chr20 31507809 31508116 -40645766 - AluJb SINE Alu -5 307 1 622 173 18 50 chr20 31508620 31508840 -40645042 + Charlie1 DNA MER1_type 2493 2705 -56 2367 82 3 13 chr20 31510447 31510787 -40643095 - AluY SINE Alu 0 311 1 1873 126 15 0 chr20 31510818 31511080 -40642802 - AluJo SINE Alu -46 266 1 856 161 21 54 chr20 31514113 31514299 -40639583 - FRAM SINE Alu 0 176 1 941 241 75 4 chr20 31514360 31514625 -40639257 - L1MB7 LINE L1 -72 6112 5829 758 186 0 0 chr20 31519871 31519989 -40633893 + FLAM_C SINE Alu 9 126 -17 1612 138 36 4 chr20 31524758 31525011 -40628871 - AluJb SINE Alu -51 261 1 215 359 0 0 chr20 31525930 31526008 -40627874 + (TG)n Simple_repeat Simple_repeat 1 78 0 243 313 65 19 chr20 31526175 31526389 -40627493 - HAL1b LINE L1 -743 605 382 225 240 0 0 chr20 31526653 31526703 -40627179 + C-rich Low_complexity Low_complexity 2 51 0 1428 229 3 23 chr20 31527649 31527955 -40625927 + AluJo SINE Alu 1 300 -2 1785 177 0 3 chr20 31527988 31528287 -40625595 + AluJo SINE Alu 6 303 -9 348 299 55 16 chr20 31529512 31529639 -40624243 - L1MC5 LINE L1 -158 7803 7672 1934 148 10 3 chr20 31529649 31529959 -40623923 + AluJb SINE Alu 1 312 0 319 340 30 0 chr20 31530023 31530123 -40623759 - L1MC4 LINE L1 -149 7893 7791 301 174 84 42 chr20 31531163 31531330 -40622552 + (CCCTG)n Simple_repeat Simple_repeat 1 174 0 272 220 0 0 chr20 31533413 31533472 -40620410 + G-rich Low_complexity Low_complexity 1 59 0 494 295 30 0 chr20 31533565 31533731 -40620151 - L1MD3 LINE L1 -180 7815 7645 207 0 0 0 chr20 31534607 31534630 -40619252 + (GGGA)n Simple_repeat Simple_repeat 1 23 0 383 218 0 0 chr20 31537138 31537216 -40616666 + LTR49-int LTR ERV1 3261 3338 -2993 413 171 31 78 chr20 31537265 31537394 -40616488 + LTR49-int LTR ERV1 3341 3463 -2868 2102 97 38 0 chr20 31538550 31538840 -40615042 - AluSq SINE Alu -12 301 1 1897 127 31 14 chr20 31539406 31539697 -40614185 + AluJo SINE Alu 1 296 -16 250 184 0 0 chr20 31541819 31541868 -40612014 - MIR SINE MIR -144 118 70 187 184 0 0 chr20 31544470 31544508 -40609374 + L2 LINE L2 3138 3175 -97 2159 107 7 7 chr20 31544844 31545152 -40608730 - AluSc SINE Alu -1 308 1 1630 105 151 0 chr20 31545194 31545452 -40608430 - AluSx SINE Alu -15 297 1 21 0 0 0 chr20 31545613 31545634 -40608248 + AT_rich Low_complexity Low_complexity 1 21 0 2323 94 0 3 chr20 31545639 31545946 -40607936 - AluSc SINE Alu -3 306 1 2185 105 3 6 chr20 31546169 31546482 -40607400 + AluSx SINE Alu 1 312 0 1847 157 0 14 chr20 31546663 31546956 -40606926 - AluJb SINE Alu -12 300 12 30 100 0 0 chr20 31548141 31548241 -40605641 + AT_rich Low_complexity Low_complexity 1 100 0 292 110 24 87 chr20 31550937 31551064 -40602818 + (CAGAGA)n Simple_repeat Simple_repeat 6 124 0 1203 233 175 43 chr20 31551385 31551831 -40602051 + MLT1D LTR MaLR 1 505 0 1892 145 0 10 chr20 31552003 31552293 -40601589 - AluSx SINE Alu -25 287 1 1623 177 7 13 chr20 31552337 31552454 -40601428 + AluJb SINE Alu 16 132 -180 10525 40 9 52 chr20 31552454 31553916 -40599966 + SVA Other Other 19 1419 0 1623 177 7 13 chr20 31553916 31554096 -40599786 + AluJb SINE Alu 132 312 0 2169 112 3 0 chr20 31554262 31554558 -40599324 - AluSx SINE Alu -15 297 1 1751 179 3 7 chr20 31554681 31554982 -40598900 + AluJo SINE Alu 1 300 -12 2281 91 3 10 chr20 31556435 31556744 -40597138 - AluSg1 SINE Alu -2 307 1 1490 105 74 39 chr20 31556959 31557216 -40596666 + AluJo SINE Alu 18 283 -29 2088 131 7 0 chr20 31558320 31558626 -40595256 + AluSx SINE Alu 1 308 -4 451 308 57 21 chr20 31559878 31560213 -40593669 + LTR65 LTR ERV1 10 356 -313 530 228 158 0 chr20 31560254 31560425 -40593457 + LTR65 LTR ERV1 472 669 0 180 0 0 0 chr20 31562648 31562668 -40591214 + (TA)n Simple_repeat Simple_repeat 2 21 0 2183 93 0 20 chr20 31562668 31562968 -40590914 - AluSx SINE Alu -16 296 3 1969 136 3 0 chr20 31563012 31563307 -40590575 - AluSx SINE Alu -16 296 1 261 266 0 0 chr20 31563762 31563856 -40590026 + (CA)n Simple_repeat Simple_repeat 2 95 0 1340 172 9 0 chr20 31565286 31565519 -40588363 + AluJb SINE Alu 78 312 0 1332 203 118 55 chr20 31565632 31566071 -40587811 + MLT1C LTR MaLR 1 467 0 2196 110 3 0 chr20 31566074 31566384 -40587498 + AluSx SINE Alu 1 311 -1 315 218 36 0 chr20 31566389 31566499 -40587383 + GA-rich Low_complexity Low_complexity 3 116 0 5888 134 9 22 chr20 31566518 31567471 -40586411 + HUERS-P1 LTR ERV1 5317 6257 -6 2253 97 0 0 chr20 31567473 31567771 -40586111 + AluSg SINE Alu 2 299 -11 3830 102 21 61 chr20 31567780 31568389 -40585493 + LTR8 LTR ERV1 1 585 -106 43058 36 23 1 chr20 31570235 31576256 -40577626 + L1PA3 LINE L1 1 6155 0 306 254 10 129 chr20 31576465 31576658 -40577224 + L1ME4a LINE L1 5930 6099 -22 1796 157 0 13 chr20 31577265 31577578 -40576304 + AluJb SINE Alu 1 309 -3 218 196 0 43 chr20 31577828 31577874 -40576008 - L2 LINE L2 -4 3268 3225 514 250 39 32 chr20 31579270 31579426 -40574456 + L1ME3 LINE L1 6003 6159 -3 1528 175 66 113 chr20 31580329 31580878 -40573004 - Charlie1b DNA MER1_type 0 523 1 1457 209 39 3 chr20 31580958 31581289 -40572593 + L1ME1 LINE L1 5820 6162 -4 559 339 56 5 chr20 31581727 31581922 -40571960 + MIR SINE MIR 6 210 -52 278 167 0 0 chr20 31582298 31582346 -40571536 + L1ME1 LINE L1 5649 5696 -468 380 82 0 4 chr20 31582346 31582409 -40571473 + AluSp/q SINE Alu 249 303 0 958 174 26 0 chr20 31582410 31582600 -40571282 + L1ME1 LINE L1 5691 5885 -281 880 128 0 123 chr20 31582686 31582865 -40571017 + Tigger1 DNA MER2_type 1 157 -2261 1418 179 56 18 chr20 31582877 31583162 -40570720 - AluJo SINE Alu -5 307 12 1107 204 0 14 chr20 31583164 31583380 -40570502 - AluSx SINE Alu -99 213 1 287 64 0 21 chr20 31583380 31583427 -40570455 + Tigger1 DNA MER2_type 2220 2265 -153 5812 181 61 62 chr20 31583428 31583691 -40570191 + L1MC3 LINE L1 3421 3683 -4102 521 222 0 0 chr20 31583691 31583790 -40570092 + FLAM_A SINE Alu 1 99 -43 5812 181 61 62 chr20 31583790 31583808 -40570074 + L1MC3 LINE L1 3683 3700 -4085 1904 122 36 7 chr20 31583808 31584112 -40569770 + AluSq SINE Alu 1 313 0 5812 181 61 62 chr20 31584112 31585372 -40568510 + L1MC3 LINE L1 3700 4960 -2825 2168 107 0 0 chr20 31585372 31585670 -40568212 - AluY SINE Alu -13 298 1 5812 181 61 62 chr20 31585670 31586932 -40566950 + L1MC3 LINE L1 4960 6222 -1563 2223 84 3 3 chr20 31586932 31587229 -40566653 - AluY SINE Alu -14 297 1 5812 181 61 62 chr20 31587229 31587251 -40566631 + L1MC3 LINE L1 6222 7785 0 1031 199 5 23 chr20 31587828 31588044 -40565838 + AluJo SINE Alu 1 212 -100 2147 98 0 3 chr20 31588217 31588514 -40565368 + AluSc SINE Alu 3 298 -11 192 40 0 0 chr20 31588732 31588757 -40565125 + (A)n Simple_repeat Simple_repeat 1 25 0 826 223 0 0 chr20 31588760 31588917 -40564965 + FAM SINE Alu 1 157 -18 2483 52 0 7 chr20 31589089 31589397 -40564485 + AluY SINE Alu 4 309 -2 3869 138 6 16 chr20 31589570 31590217 -40563665 + L1MB4 LINE L1 5540 6180 0 226 255 122 43 chr20 31590330 31590585 -40563297 + L1M4 LINE L1 3923 4197 -1949 2324 128 34 3 chr20 31590597 31590950 -40562932 + THE1B LTR MaLR 1 364 0 428 125 97 0 chr20 31590967 31591039 -40562843 + MER72 LTR ERV1 2 80 -642 459 0 0 0 chr20 31591245 31591296 -40562586 + (CA)n Simple_repeat Simple_repeat 1 51 0 272 320 87 0 chr20 31591500 31591603 -40562279 + L2 LINE L2 3182 3293 -20 312 327 28 9 chr20 31591776 31591883 -40561999 - MER5B DNA MER1_type -14 164 56 1692 108 62 0 chr20 31591926 31592214 -40561668 + AluSp SINE Alu 7 310 0 2103 128 0 0 chr20 31592271 31592577 -40561305 - AluSx SINE Alu -6 306 1 2203 98 0 3 chr20 31592577 31592874 -40561008 - AluSx SINE Alu -15 297 2 432 182 20 13 chr20 31593047 31593295 -40560587 + AluJo SINE Alu 1 282 -30 24 67 0 0 chr20 31595025 31595070 -40558812 + AT_rich Low_complexity Low_complexity 1 45 0 2271 86 7 0 chr20 31595838 31596142 -40557740 - AluSc SINE Alu -3 306 1 553 217 17 9 chr20 31597146 31597261 -40556621 + FLAM_C SINE Alu 7 122 -21 1856 160 0 0 chr20 31598014 31598301 -40555581 + AluJb SINE Alu 1 287 -25 436 252 139 54 chr20 31598331 31598589 -40555293 + L1MC/D LINE L1 5499 5778 -2030 22 0 0 0 chr20 31599385 31599407 -40554475 + AT_rich Low_complexity Low_complexity 1 22 0 2586 26 0 10 chr20 31599425 31599731 -40554151 + AluY SINE Alu 1 303 -8 1811 148 0 4 chr20 31599879 31600156 -40553726 - AluSx SINE Alu -36 276 1 2437 77 0 3 chr20 31600514 31600825 -40553057 - AluSg SINE Alu 0 310 1 690 264 287 10 chr20 31600850 31601335 -40552547 + HAL1 LINE L1 8 626 -1881 542 127 0 0 chr20 31601683 31601762 -40552120 - AluY SINE Alu -14 297 219 310 309 36 58 chr20 31601814 31601953 -40551929 - L1 LINE L1 -1725 4421 4286 2325 80 0 0 chr20 31601959 31602270 -40551612 + AluY SINE Alu 1 311 0 1978 117 7 17 chr20 31602280 31602578 -40551304 + AluSx SINE Alu 3 297 -15 1978 101 22 0 chr20 31602578 31602856 -40551026 + AluSg1 SINE Alu 1 284 -25 387 98 0 0 chr20 31602864 31602925 -40550957 + (GGGGA)n Simple_repeat Simple_repeat 5 65 0 2213 94 7 0 chr20 31602950 31603258 -40550624 - AluSp SINE Alu -3 310 1 258 222 0 0 chr20 31603435 31603480 -40550402 - L2 LINE L2 -1 3312 3268 2136 103 7 0 chr20 31603501 31603802 -40550080 - AluSc SINE Alu -6 303 1 2037 128 7 0 chr20 31603870 31604174 -40549708 + AluSq SINE Alu 1 306 -7 1748 139 145 36 chr20 31604541 31604928 -40548954 - MSTB1 LTR MaLR 0 432 4 256 291 19 39 chr20 31605242 31605345 -40548537 + MLT1J LTR MaLR 75 175 -336 1245 231 216 39 chr20 31605530 31606054 -40547828 - L1MC4a LINE L1 -1761 6047 5379 1549 173 34 0 chr20 31606054 31606320 -40547562 + AluJb SINE Alu 3 277 -35 1245 231 216 39 chr20 31606320 31606461 -40547421 - L1MC4a LINE L1 -2429 5379 5264 2082 97 35 0 chr20 31606557 31606847 -40547035 - AluSp SINE Alu -9 304 5 254 345 10 31 chr20 31606962 31607156 -40546726 - L1MC4a LINE L1 -1162 4984 4795 3583 158 48 14 chr20 31607697 31608363 -40545519 - L1MB3 LINE L1 -20 6163 5475 1401 208 31 0 chr20 31609133 31609421 -40544461 + AluJo SINE Alu 4 300 -12 1028 153 61 5 chr20 31609422 31609618 -40544264 - L1MB3 LINE L1 -710 5470 5264 445 295 43 82 chr20 31609618 31609899 -40543983 - MLT1I LTR MaLR -14 395 126 573 147 0 176 chr20 31610065 31610235 -40543647 + FLAM_C SINE Alu 2 141 -2 705 244 62 21 chr20 31610918 31611111 -40542771 + MIR SINE MIR 62 262 0 847 128 15 15 chr20 31611136 31611269 -40542613 - FLAM_C SINE Alu 0 133 1 515 183 0 11 chr20 31612040 31612133 -40541749 - AluJ/FLAM SINE Alu -218 94 3 336 215 47 37 chr20 31612137 31612244 -40541638 - L1MEc LINE L1 -3064 3151 3044 772 252 0 0 chr20 31612291 31612450 -40541432 - FRAM SINE Alu -6 160 2 343 170 6 214 chr20 31612453 31612501 -40541381 - L1MEc LINE L1 -4682 1714 1658 1298 163 107 69 chr20 31612501 31612790 -40541092 - AluJb SINE Alu -2 300 1 343 170 6 214 chr20 31612790 31612923 -40540959 - L1MEc LINE L1 -4738 1658 1571 2903 183 58 16 chr20 31612923 31613492 -40540390 + MER7C DNA MER2_type 1 593 -9 2028 137 0 0 chr20 31613550 31613856 -40540026 + AluSx SINE Alu 1 306 -6 582 324 37 17 chr20 31613912 31614211 -40539671 - L1MEc LINE L1 -4893 1503 1199 1304 181 32 28 chr20 31614212 31614494 -40539388 - AluJb SINE Alu -12 300 18 554 247 84 59 chr20 31614612 31614779 -40539103 - L1MEc LINE L1 -5284 1112 934 2225 78 3 23 chr20 31614779 31615085 -40538797 - AluSp SINE Alu -13 300 1 554 247 84 59 chr20 31615085 31615204 -40538678 - L1MEc LINE L1 -5462 934 819 2216 180 16 0 chr20 31615204 31615588 -40538294 + MLT1B LTR MaLR 1 390 0 1369 238 112 5 chr20 31615664 31616038 -40537844 - L1MEc LINE L1 -5889 507 94 2208 70 3 3 chr20 31616126 31616432 -40537450 + AluY SINE Alu 1 306 0 488 244 52 66 chr20 31616888 31617101 -40536781 + L2 LINE L2 3103 3312 -1 1745 146 61 20 chr20 31617636 31617979 -40535903 - MSTC LTR MaLR -2 426 70 2193 97 0 3 chr20 31617981 31618281 -40535601 - AluSc SINE Alu -10 299 1 282 106 0 167 chr20 31618310 31618376 -40535506 - MSTC LTR MaLR -337 59 5 298 253 187 0 chr20 31618586 31618677 -40535205 + L2 LINE L2 3160 3267 -5 180 0 0 0 chr20 31618983 31619003 -40534879 + (T)n Simple_repeat Simple_repeat 1 20 0 634 302 117 3 chr20 31619630 31619921 -40533961 + L2 LINE L2 1347 1670 -1644 1021 188 160 4 chr20 31620008 31620258 -40533624 - AluJb SINE Alu -6 306 18 335 227 0 59 chr20 31620377 31620496 -40533386 - L1MEc LINE L1 -5285 1111 1000 516 93 0 0 chr20 31620545 31620620 -40533262 - AluSp/q SINE Alu -11 302 228 22 0 0 0 chr20 31620699 31620721 -40533161 + AT_rich Low_complexity Low_complexity 1 22 0 442 244 446 15 chr20 31620751 31621469 -40532413 + L2 LINE L2 1729 2755 -559 1996 108 0 58 chr20 31621912 31622237 -40531645 - AluSx SINE Alu 0 312 7 266 304 193 0 chr20 31622298 31622433 -40531449 - MIR SINE MIR -12 250 90 205 250 0 0 chr20 31622812 31622852 -40531030 + polypurine Low_complexity Low_complexity 1 40 0 2356 66 0 44 chr20 31623824 31623959 -40529923 + AluSg SINE Alu 1 140 -170 2256 100 0 3 chr20 31623959 31624269 -40529613 + AluSg SINE Alu 1 309 -1 2356 66 0 44 chr20 31624269 31624453 -40529429 + AluSg SINE Alu 140 306 -4 180 77 0 0 chr20 31624688 31624714 -40529168 + (CA)n Simple_repeat Simple_repeat 2 27 0 1735 181 3 0 chr20 31624748 31625058 -40528824 + AluJb SINE Alu 1 311 -1 360 331 0 0 chr20 31625069 31625199 -40528683 + Charlie8 DNA MER1_type 134 263 -2154 204 40 0 0 chr20 31625239 31625264 -40528618 + (TG)n Simple_repeat Simple_repeat 2 26 0 2189 93 23 0 chr20 31625341 31625641 -40528241 + AluSp SINE Alu 1 307 -6 603 197 17 8 chr20 31625857 31625974 -40527908 + FLAM_C SINE Alu 9 126 -17 234 0 0 0 chr20 31625975 31626001 -40527881 + (TAAA)n Simple_repeat Simple_repeat 1 26 0 21 36 0 0 chr20 31626044 31626072 -40527810 + AT_rich Low_complexity Low_complexity 1 28 0 2214 73 0 10 chr20 31626102 31626417 -40527465 + AluY SINE Alu 1 312 0 417 257 103 62 chr20 31626467 31626535 -40527347 + L1M4 LINE L1 3658 3722 -2424 2336 65 3 10 chr20 31626535 31626845 -40527037 - AluY SINE Alu -3 308 1 417 257 103 62 chr20 31626845 31626883 -40526999 + L1M4 LINE L1 3722 3757 -2389 2086 118 3 3 chr20 31626883 31627189 -40526693 + AluSq SINE Alu 1 306 -7 417 257 103 62 chr20 31627189 31627564 -40526318 + L1M4 LINE L1 3757 4160 -1986 1387 127 33 118 chr20 31627564 31627894 -40525988 + AluSx SINE Alu 1 302 0 584 156 73 0 chr20 31627932 31628028 -40525854 + AluJb SINE Alu 190 292 -20 2331 67 7 0 chr20 31628046 31628345 -40525537 + AluSg SINE Alu 1 301 -9 476 264 174 0 chr20 31628580 31628735 -40525147 - L2 LINE L2 0 3313 3132 2213 65 3 56 chr20 31629066 31629390 -40524492 - AluSp SINE Alu -5 308 2 23 33 0 0 chr20 31630759 31630789 -40523093 + GC_rich Low_complexity Low_complexity 1 30 0 2424 49 10 3 chr20 31632006 31632313 -40521569 - AluY SINE Alu -2 309 1 998 133 0 30 chr20 31632442 31632607 -40521275 + AluSx SINE Alu 1 160 -152 1192 104 6 6 chr20 31632637 31632650 -40521232 + AluSc SINE Alu 119 131 -178 1949 131 0 7 chr20 31632650 31632948 -40520934 + AluSc SINE Alu 1 296 -13 1192 104 6 6 chr20 31632948 31633116 -40520766 + AluSc SINE Alu 130 300 -9 888 165 0 47 chr20 31633119 31633289 -40520593 + FRAM SINE Alu 1 162 -14 2230 58 0 49 chr20 31633449 31633776 -40520106 + AluY SINE Alu 1 311 0 1215 279 127 21 chr20 31633882 31634417 -40519465 + L2 LINE L2 2221 2812 -502 2240 151 12 60 chr20 31634484 31634915 -40518967 - LTR3 LTR ERVK -22 410 1 48207 119 15 23 chr20 31634917 31637829 -40516053 - HERVK3 LTR ERVK -2 7241 4307 1855 91 94 7 chr20 31637829 31638105 -40515777 + AluSg SINE Alu 1 300 -10 48207 119 15 23 chr20 31638105 31641217 -40512665 - HERVK3 LTR ERVK -2936 4307 1171 2469 71 0 0 chr20 31641217 31641526 -40512356 + AluY SINE Alu 1 309 -2 48207 119 15 23 chr20 31641526 31642399 -40511483 - HERVK3 LTR ERVK -6072 1171 404 2210 87 7 3 chr20 31642399 31642698 -40511184 + AluSc SINE Alu 1 300 -9 48207 119 15 23 chr20 31642698 31643097 -40510785 - HERVK3 LTR ERVK -6839 404 3 2396 147 7 55 chr20 31643120 31643557 -40510325 - LTR3 LTR ERVK -16 416 1 521 254 207 39 chr20 31643557 31643943 -40509939 + L2 LINE L2 2831 3281 -32 4432 161 51 35 chr20 31643943 31644821 -40509061 + MER4D LTR ERV1 1 892 -11 3738 134 20 84 chr20 31645097 31645183 -40508699 - LTR8 LTR ERV1 0 691 601 1993 102 0 34 chr20 31645183 31645370 -40508512 - AluSx SINE Alu 0 320 146 2122 101 14 7 chr20 31645370 31645667 -40508215 - AluSx SINE Alu -11 301 3 1993 102 0 34 chr20 31645667 31645809 -40508073 - AluSx SINE Alu -174 146 1 3738 134 20 84 chr20 31645809 31646459 -40507423 - LTR8 LTR ERV1 -90 601 1 1615 155 14 3 chr20 31646473 31646763 -40507119 + AluSq SINE Alu 2 294 -19 2408 44 0 7 chr20 31646893 31647188 -40506694 + AluY SINE Alu 2 294 -17 273 68 227 0 chr20 31647439 31647483 -40506399 + MIR SINE MIR 79 132 -130 650 233 106 47 chr20 31648492 31648728 -40505154 + MIR SINE MIR 11 260 -2 494 279 53 62 chr20 31648800 31648861 -40505021 - MIR SINE MIR -36 226 166 575 205 24 0 chr20 31648861 31648988 -40504894 + FLAM_C SINE Alu 1 130 -3 494 279 53 62 chr20 31648988 31649152 -40504730 - MIR SINE MIR -96 166 3 250 311 127 40 chr20 31649500 31649879 -40504003 - L2 LINE L2 -559 2755 2344 * 299 324 11 91 chr20 31649874 31650050 -40503832 - MIR3 SINE MIR -34 174 13 202 261 165 26 chr20 31650162 31650277 -40503605 - MIR3 SINE MIR -64 144 14 2105 102 0 0 chr20 31650345 31650640 -40503242 + AluY SINE Alu 1 295 -16 2172 94 3 7 chr20 31650841 31651148 -40502734 - AluSq SINE Alu -7 306 1 1671 188 10 13 chr20 31651277 31651581 -40502301 + AluJb SINE Alu 1 303 -9 1788 141 0 42 chr20 31651802 31651946 -40501936 + AluSx SINE Alu 1 149 -163 2077 114 10 10 chr20 31651946 31652243 -40501639 + AluSq SINE Alu 1 297 -16 1788 141 0 42 chr20 31652243 31652410 -40501472 + AluSx SINE Alu 149 299 -13 2166 93 0 3 chr20 31652557 31652848 -40501034 + AluSx SINE Alu 1 290 -22 1433 204 143 49 chr20 31652936 31653044 -40500838 - L1MB5 LINE L1 -4 6162 6065 371 94 0 0 chr20 31653044 31653108 -40500774 + L1MA3 LINE L1 6242 6305 0 1433 204 143 49 chr20 31653108 31653216 -40500666 - L1MB5 LINE L1 -101 6065 5968 225 103 0 0 chr20 31653216 31653245 -40500637 - MER58 DNA MER1_type -6 2414 2386 1433 204 143 49 chr20 31653245 31653342 -40500540 - L1MB5 LINE L1 -198 5968 5881 2036 103 41 3 chr20 31653342 31653634 -40500248 - AluSq SINE Alu -10 303 1 1433 204 143 49 chr20 31653634 31653957 -40499925 - L1MB5 LINE L1 -285 5881 5449 2293 92 3 0 chr20 31654195 31654498 -40499384 + AluSg SINE Alu 1 304 -6 1312 216 40 7 chr20 31654714 31655011 -40498871 + AluJo SINE Alu 1 307 -5 325 357 34 34 chr20 31655296 31655587 -40498295 + L3 LINE CR1 551 841 -736 779 293 83 58 chr20 31655594 31655689 -40498193 - L2 LINE L2 0 3313 3222 2195 86 10 7 chr20 31655689 31655991 -40497891 + AluSp SINE Alu 1 303 -10 779 293 83 58 chr20 31655991 31656362 -40497520 - L2 LINE L2 -91 3222 2835 285 196 0 18 chr20 31656700 31656756 -40497126 + L2 LINE L2 3200 3254 -18 347 230 40 63 chr20 31657626 31657752 -40496130 - L1MC5 LINE L1 -30 7931 7809 2046 120 7 0 chr20 31657859 31658151 -40495731 + AluSq SINE Alu 1 294 -19 358 271 150 21 chr20 31658841 31658981 -40494901 + MIR SINE MIR 7 164 -98 754 225 25 148 chr20 31658991 31659417 -40494465 - MER21B LTR ERV1 -227 349 6 710 43 0 0 chr20 31659551 31659645 -40494237 + L1PA8 LINE L1 6076 6169 -3 2001 118 3 0 chr20 31659948 31660244 -40493638 - AluSg SINE Alu -12 298 2 28 0 0 26 chr20 31660412 31660430 -40493452 + AT_rich Low_complexity Low_complexity 1 18 -20 2076 115 0 0 chr20 31660430 31660717 -40493165 - AluSg SINE Alu -23 287 1 28 0 0 26 chr20 31660717 31660737 -40493145 + AT_rich Low_complexity Low_complexity 18 38 0 1500 126 0 9 chr20 31660866 31661096 -40492786 + AluSg/x SINE Alu 82 309 -1 544 330 73 4 chr20 31661357 31661590 -40492292 + MIR SINE MIR 14 262 0 298 279 100 21 chr20 31662386 31662526 -40491356 - L1ME3A LINE L1 -26 6144 5994 1578 169 6 54 chr20 31662579 31662892 -40490990 + AluJb SINE Alu 3 300 -12 349 214 56 84 chr20 31662917 31663060 -40490822 - L1ME3A LINE L1 -196 5968 5829 2024 106 3 10 chr20 31663060 31663362 -40490520 - AluSp SINE Alu -13 300 1 349 214 56 84 chr20 31663362 31663396 -40490486 - L1ME3A LINE L1 -335 5829 5796 1892 134 10 0 chr20 31663399 31663697 -40490185 - AluSx SINE Alu -11 301 1 1056 71 0 0 chr20 31663742 31663882 -40490000 - AluY SINE Alu 0 311 172 2278 77 6 10 chr20 31663887 31664199 -40489683 - AluY SINE Alu 0 311 1 1121 253 133 21 chr20 31664199 31664725 -40489157 - L1ME3A LINE L1 -1087 5059 4475 1472 197 3 10 chr20 31664731 31664798 -40489084 - L1MB7 LINE L1 0 6184 6118 662 246 183 27 chr20 31664798 31665136 -40488746 - L1MD3 LINE L1 -1867 6128 5738 327 307 36 36 chr20 31665247 31665387 -40488495 + L2 LINE L2 3174 3313 0 391 268 242 22 chr20 31665646 31665915 -40487967 + L1MC4a LINE L1 5897 6224 -1584 2640 145 28 147 chr20 31666110 31666567 -40487315 - L1MB3 LINE L1 -83 6336 5826 1675 100 38 0 chr20 31666567 31666807 -40487075 + AluSp SINE Alu 1 249 -64 2168 96 3 0 chr20 31666809 31667110 -40486772 - AluSp SINE Alu -11 302 1 2640 145 28 147 chr20 31667110 31667446 -40486436 - L1MB3 LINE L1 -594 5825 5722 669 91 10 20 chr20 31667453 31667552 -40486330 - AluSq SINE Alu -15 298 201 1525 90 66 0 chr20 31667557 31667769 -40486113 - AluSq SINE Alu -87 226 1 7735 191 42 86 chr20 31667772 31668155 -40485727 - L1MB3 LINE L1 -693 5723 5325 2221 106 0 3 chr20 31668155 31668458 -40485424 - AluSq SINE Alu -11 302 1 7735 191 42 86 chr20 31668458 31668679 -40485203 - L1MB3 LINE L1 -1091 5325 5096 2460 61 0 3 chr20 31668679 31668989 -40484893 - AluY SINE Alu -2 309 1 7735 191 42 86 chr20 31668989 31669262 -40484620 - L1MB3 LINE L1 -1320 5096 4812 2253 99 3 3 chr20 31669262 31669574 -40484308 - AluSx SINE Alu 0 312 1 7735 191 42 86 chr20 31669574 31670201 -40483681 - L1MB3 LINE L1 -1604 4812 4159 2059 129 0 0 chr20 31670201 31670496 -40483386 - AluSg SINE Alu -15 295 1 7735 191 42 86 chr20 31670496 31670812 -40483070 - L1MB3 LINE L1 -2257 4159 3830 2276 86 3 0 chr20 31670812 31671115 -40482767 - AluSp SINE Alu -9 304 1 7735 191 42 86 chr20 31671115 31671847 -40482035 - L1MB3 LINE L1 -2586 3830 3067 1976 142 0 3 chr20 31671847 31672157 -40481725 - AluSx SINE Alu -3 309 1 1985 123 3 17 chr20 31672157 31672457 -40481425 - AluSx SINE Alu -16 296 1 7735 191 42 86 chr20 31672457 31672584 -40481298 - L1MB3 LINE L1 -3127 3289 3158 1128 114 48 0 chr20 31672589 31672755 -40481127 - AluSg/x SINE Alu -5 307 134 2243 98 0 0 chr20 31672755 31673051 -40480831 - AluSx SINE Alu -15 297 2 252 184 101 0 chr20 31673075 31673184 -40480698 + (TTATA)n Simple_repeat Simple_repeat 5 124 0 1293 167 33 84 chr20 31673185 31673636 -40480246 - L1MB3 LINE L1 -3734 2648 2224 1421 191 11 11 chr20 31673640 31673922 -40479960 + MER2 DNA MER2_type 39 320 -25 2361 132 203 93 chr20 31673930 31674285 -40479597 - L1MB3 LINE L1 -4167 2217 1903 1647 151 7 11 chr20 31674285 31674563 -40479319 + AluSx SINE Alu 1 277 -35 2361 132 203 93 chr20 31674563 31674659 -40479223 - L1MB3 LINE L1 -4481 1903 1819 907 208 25 121 chr20 31674659 31674725 -40479157 - MLT1A1 LTR MaLR 0 365 294 1538 187 10 23 chr20 31674725 31675030 -40478852 - AluJo SINE Alu -11 301 1 907 208 25 121 chr20 31675030 31675367 -40478515 - MLT1A1 LTR MaLR -71 294 1 2361 132 203 93 chr20 31675367 31675583 -40478299 - L1MB3 LINE L1 -4565 1819 1475 834 196 22 17 chr20 31675583 31675762 -40478120 - AluJo SINE Alu -14 298 119 2028 101 0 24 chr20 31675763 31676051 -40477831 + AluSg SINE Alu 1 281 -29 1284 97 5 46 chr20 31676051 31676246 -40477636 - AluSq SINE Alu -126 187 1 475 281 139 7 chr20 31676520 31676823 -40477059 - HAL1 LINE L1 -924 1583 1241 639 154 17 0 chr20 31676997 31677114 -40476768 - L1MB2 LINE L1 -4 6167 6049 2140 199 55 4 chr20 31677120 31677612 -40476270 - L1MA9 LINE L1 -5 6307 5791 1966 153 24 18 chr20 31677623 31677963 -40475919 - MER2 DNA MER2_type 0 344 3 1542 163 176 0 chr20 31677972 31678267 -40475615 + MER7A DNA MER2_type 2 346 0 1894 150 177 0 chr20 31678305 31678666 -40475216 - MER83 LTR ERV1 0 448 24 1381 204 18 98 chr20 31678677 31679127 -40474755 - L1MA9 LINE L1 -981 5165 4752 7918 80 6 21 chr20 31681053 31682127 -40471755 + MER11C LTR ERVK 1 1057 -14 1341 141 0 9 chr20 31682805 31683032 -40470850 - AluJb SINE Alu -1 311 87 1017 142 6 34 chr20 31683389 31683565 -40470317 - AluJo SINE Alu -17 295 125 386 173 0 27 chr20 31683905 31683980 -40469902 - MER116 DNA Mariner -1 79 7 213 255 0 0 chr20 31684197 31684248 -40469634 + MIR SINE MIR 159 209 -53 480 261 113 55 chr20 31684304 31684340 -40469542 - L1ME4a LINE L1 -270 5851 5819 1670 165 3 29 chr20 31684340 31684649 -40469233 + AluJo SINE Alu 1 301 -11 480 261 113 55 chr20 31684649 31684923 -40468959 - L1ME4a LINE L1 -302 5819 5523 300 235 88 29 chr20 31685001 31685103 -40468779 - L1ME4a LINE L1 -2387 5398 5291 2022 128 3 0 chr20 31685222 31685518 -40468364 + AluSx SINE Alu 1 297 -15 741 236 6 12 chr20 31685635 31685796 -40468086 - FRAM SINE Alu -20 156 1 1695 174 7 7 chr20 31687001 31687305 -40466577 - AluJo SINE Alu -8 304 1 309 118 0 0 chr20 31687719 31687770 -40466112 + (TA)n Simple_repeat Simple_repeat 1 51 0 2065 113 7 0 chr20 31688736 31689037 -40464845 + AluSg SINE Alu 1 303 -7 1686 176 0 3 chr20 31689122 31689406 -40464476 + AluJo SINE Alu 1 283 -29 1690 158 22 0 chr20 31689453 31689731 -40464151 - MER2 DNA MER2_type -61 284 1 269 297 69 40 chr20 31690057 31690158 -40463724 - L2 LINE L2 0 3272 3169 288 266 71 33 chr20 31690158 31690342 -40463540 + L1MC/D LINE L1 5666 5856 -1952 325 300 20 10 chr20 31690346 31690446 -40463436 + L1ME LINE L1 89 189 -5930 1420 171 82 7 chr20 31690467 31690747 -40463135 + AluJo SINE Alu 1 301 -11 460 265 60 56 chr20 31691196 31691498 -40462384 + L1ME LINE L1 709 1011 -5108 354 302 75 12 chr20 31691517 31691778 -40462104 + L1ME LINE L1 1063 1381 -4862 498 105 12 47 chr20 31691781 31691867 -40462015 + L1MD1 LINE L1 6159 6241 -1 489 256 33 38 chr20 31691840 31692051 -40461831 + L1ME LINE L1 1350 1559 -4751 * 227 261 27 5 chr20 31692106 31692222 -40461660 - L2 LINE L2 -7 3306 3130 886 246 115 35 chr20 31692421 31692656 -40461226 - L1ME3A LINE L1 -9 6161 5946 1700 130 95 0 chr20 31692656 31692940 -40460942 - AluJb SINE Alu -1 311 1 886 246 115 35 chr20 31692940 31693103 -40460779 - L1ME3A LINE L1 -224 5946 5731 349 312 135 6 chr20 31693152 31693322 -40460560 + L1ME LINE L1 1541 1732 -4578 657 296 62 35 chr20 31693328 31693559 -40460323 + L1ME LINE L1 1781 2004 -4125 2301 87 3 0 chr20 31693559 31693859 -40460023 - AluSx SINE Alu -11 301 1 657 296 62 35 chr20 31693859 31694280 -40459602 + L1ME LINE L1 2004 2409 -3720 455 276 74 25 chr20 31695641 31695804 -40458078 - MIR SINE MIR -72 190 20 201 277 106 57 chr20 31695881 31696022 -40457860 + MIR3 SINE MIR 4 151 -57 186 133 0 0 chr20 31696279 31696309 -40457573 + (TTTTC)n Simple_repeat Simple_repeat 1 30 0 2148 102 129 69 chr20 31696366 31696601 -40457281 - MSTA LTR MaLR 0 428 158 2122 102 3 16 chr20 31696601 31696915 -40456967 + AluY SINE Alu 1 310 -1 2148 102 129 69 chr20 31696915 31697083 -40456799 - MSTA LTR MaLR -270 158 1 9098 169 32 18 chr20 31697098 31698712 -40455170 - MSTA-int LTR MaLR -14 1637 1 2224 118 136 16 chr20 31698712 31699094 -40454788 - MSTA LTR MaLR 0 428 1 235 293 81 0 chr20 31699131 31699230 -40454652 - MER94 DNA DNA -26 108 2 944 126 52 13 chr20 31700080 31700255 -40453627 - MSTA LTR MaLR -84 342 146 1115 221 159 24 chr20 31703271 31703693 -40450189 - MLT1G LTR MaLR -144 446 1 382 261 85 55 chr20 31705410 31705717 -40448165 + L1MC5 LINE L1 7298 7613 -348 1753 201 25 3 chr20 31705844 31706202 -40447680 + MER47A DNA MER2_type 1 366 0 1993 121 0 0 chr20 31706404 31706693 -40447189 - AluSg1 SINE Alu -20 289 1 315 192 0 0 chr20 31706892 31706970 -40446912 + (TCCA)n Simple_repeat Simple_repeat 3 80 0 2508 183 48 6 chr20 31707059 31707563 -40446319 - L1MA9 LINE L1 -5 6307 5783 180 0 0 0 chr20 31708485 31708505 -40445377 + (GGGA)n Simple_repeat Simple_repeat 3 22 0 230 350 66 7 chr20 31708885 31709022 -40444860 + MIR SINE MIR 29 173 -89 3036 108 12 9 chr20 31709709 31710136 -40443746 - MSTA LTR MaLR 0 428 1 1956 141 0 0 chr20 31710393 31710690 -40443192 + AluSx SINE Alu 1 297 -15 1092 197 27 0 chr20 31710747 31710970 -40442912 + AluJb SINE Alu 1 229 -83 234 0 0 0 chr20 31712703 31712729 -40441153 + (T)n Simple_repeat Simple_repeat 1 26 0 292 274 150 0 chr20 31715601 31715714 -40438168 + MIR SINE MIR 28 157 -105 2043 120 10 7 chr20 31716502 31716810 -40437072 - AluSx SINE Alu -3 309 1 302 272 66 41 chr20 31717604 31717779 -40436103 - MIR3 SINE MIR -33 175 11 246 256 96 45 chr20 31719750 31719906 -40433976 - L1ME4a LINE L1 -3 6118 5955 2246 63 35 3 chr20 31719933 31720217 -40433665 + AluY SINE Alu 1 293 -18 252 242 0 91 chr20 31720238 31720337 -40433545 - L1ME4a LINE L1 -302 5819 5730 2463 71 0 0 chr20 31722088 31722396 -40431486 - AluY SINE Alu -3 308 1 1123 220 57 21 chr20 31723776 31724148 -40429734 - Charlie1b DNA MER1_type -26 497 113 2177 94 0 17 chr20 31724151 31724448 -40429434 + AluSg SINE Alu 1 292 -18 27 0 0 0 chr20 31725448 31725475 -40428407 + AT_rich Low_complexity Low_complexity 1 27 0 324 228 70 70 chr20 31726458 31726572 -40427310 - L1MD3 LINE L1 -2 7993 7880 535 225 37 48 chr20 31726653 31726840 -40427042 + L1MC4 LINE L1 7477 7661 -381 276 183 87 26 chr20 31726992 31727107 -40426775 + L1M4 LINE L1 5204 5325 -821 1258 258 146 50 chr20 31727525 31728346 -40425536 - L1MC4 LINE L1 -411 7631 6732 495 94 24 0 chr20 31728490 31728575 -40425307 - L1PA16 LINE L1 -1 6165 6079 530 223 112 20 chr20 31728600 31728797 -40425085 - MLT1G1 LTR MaLR -283 312 98 2371 90 0 3 chr20 31729312 31729622 -40424260 - AluSc SINE Alu 0 309 1 2182 113 3 13 chr20 31729622 31729933 -40423949 - AluSq SINE Alu -5 308 1 1971 136 0 37 chr20 31730024 31730347 -40423535 + AluSx SINE Alu 1 311 -1 2117 93 9 37 chr20 31734427 31734748 -40419134 + AluSx SINE Alu 1 312 0 1458 98 59 0 chr20 31736881 31737085 -40416797 - AluSq SINE Alu -97 216 1 1041 139 42 29 chr20 31737149 31737387 -40416495 - L1 LINE L1 -2391 3755 3515 1232 89 0 0 chr20 31737396 31737564 -40416318 - AluSg/x SINE Alu 0 312 145 2265 81 17 7 chr20 31737596 31737893 -40415989 + AluSq SINE Alu 5 304 -9 1210 96 0 24 chr20 31737893 31738059 -40415823 + AluSg/x SINE Alu 132 293 -17 317 289 21 41 chr20 31738060 31738157 -40415725 - L1MDa LINE L1 -4549 1991 1897 735 264 109 28 chr20 31738282 31738604 -40415278 - MLT1D LTR MaLR -30 475 128 1790 151 20 10 chr20 31738762 31738956 -40414926 - AluSx SINE Alu 0 312 127 438 20 0 0 chr20 31738956 31739007 -40414875 + (TG)n Simple_repeat Simple_repeat 2 52 0 1790 151 20 10 chr20 31739007 31739136 -40414746 - AluSx SINE Alu -185 127 1 534 12 75 0 chr20 31739138 31739218 -40414664 + T-rich Low_complexity Low_complexity 4 89 0 759 139 0 62 chr20 31739220 31739349 -40414533 - FLAM_C SINE Alu -22 121 1 1511 207 186 2 chr20 31739351 31739829 -40414053 - L1ME3A LINE L1 0 6170 5605 1354 169 143 7 chr20 31739869 31740141 -40413741 + AluJb SINE Alu 1 309 -3 662 59 0 0 chr20 31740221 31740306 -40413576 + AluSp/q SINE Alu 214 298 -15 387 0 0 0 chr20 31740307 31740350 -40413532 + (TA)n Simple_repeat Simple_repeat 1 43 0 762 245 62 51 chr20 31740370 31740839 -40413043 - L1MDa LINE L1 -4988 1542 1069 230 300 170 0 chr20 31741183 31741283 -40412599 + L2 LINE L2 2637 2753 -561 1502 135 139 11 chr20 31741389 31741655 -40412227 + AluJo SINE Alu 1 300 -12 830 182 0 0 chr20 31741829 31741961 -40411921 - FLAM_A SINE Alu -1 132 1 215 280 38 32 chr20 31744027 31744184 -40409698 + (CAGGG)n Simple_repeat Simple_repeat 3 160 0 237 298 11 11 chr20 31744818 31744912 -40408970 + MER46C DNA MER2_type 112 205 -133 868 178 0 7 chr20 31745690 31745842 -40408040 - AluJo SINE Alu -153 159 9 2036 131 0 0 chr20 31745867 31746157 -40407725 - AluSx SINE Alu -22 290 1 228 283 48 99 chr20 31746168 31746353 -40407529 - L1MC4 LINE L1 -1 8041 7883 1811 173 13 0 chr20 31746353 31746659 -40407223 + AluJb SINE Alu 1 310 -2 228 283 48 99 chr20 31746659 31746847 -40407035 - L1MC4 LINE L1 -159 7883 7687 499 276 51 15 chr20 31746929 31747125 -40406757 - MLT1G LTR MaLR -39 551 349 263 241 25 0 chr20 31747285 31747364 -40406518 - MLT1G1 LTR MaLR -504 91 11 277 379 53 5 chr20 31747387 31747593 -40406289 - L1MC5 LINE L1 -451 7510 7295 295 248 120 23 chr20 31747772 31747905 -40405977 + L1MC4 LINE L1 7480 7625 -417 244 122 61 0 chr20 31748169 31748218 -40405664 + L1MC4 LINE L1 7991 8042 0 2096 113 0 0 chr20 31748218 31748540 -40405342 - AluSx SINE Alu 0 322 1 27 0 0 0 chr20 31749360 31749387 -40404495 + AT_rich Low_complexity Low_complexity 1 27 0 350 300 0 0 chr20 31749577 31749667 -40404215 - MER20 DNA MER1_type -128 91 2 1650 160 7 7 chr20 31749720 31750001 -40403881 + AluJo SINE Alu 1 281 -31 252 0 0 0 chr20 31750004 31750032 -40403850 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 292 359 136 17 chr20 31750485 31750780 -40403102 + L1ME LINE L1 5525 5854 -267 295 254 173 50 chr20 31754419 31754679 -40399203 - L2 LINE L2 -205 3108 2817 700 263 37 5 chr20 31754695 31754885 -40398997 + MIR SINE MIR 35 230 -32 2077 103 4 4 chr20 31755326 31755631 -40398251 - AluSc SINE Alu 0 305 1 2130 128 0 3 chr20 31755721 31756026 -40397856 - AluSx SINE Alu -8 304 1 2140 122 3 3 chr20 31756097 31756409 -40397473 - AluSx SINE Alu 0 312 1 1310 99 0 0 chr20 31756409 31756581 -40397301 - AluSc SINE Alu -6 303 132 2088 74 64 11 chr20 31756581 31756864 -40397018 - AluSx SINE Alu -14 298 1 258 316 194 19 chr20 31757580 31757786 -40396096 - L2 LINE L2 -378 2936 2695 2248 70 0 20 chr20 31758604 31758906 -40394976 - AluY SINE Alu -15 296 1 22 35 0 0 chr20 31759990 31760019 -40393863 + AT_rich Low_complexity Low_complexity 1 29 0 356 339 55 66 chr20 31760199 31760488 -40393394 + L1M4 LINE L1 4457 4742 -1404 290 128 0 0 chr20 31760506 31760553 -40393329 + L1ME2 LINE L1 6069 6115 -49 1359 208 70 88 chr20 31760607 31760805 -40393077 + L1M4 LINE L1 2604 2804 -3342 2493 53 0 0 chr20 31760805 31761109 -40392773 + L1PA5 LINE L1 5851 6154 0 1359 208 70 88 chr20 31761109 31761469 -40392413 + L1M4 LINE L1 2804 3152 -2994 250 254 32 103 chr20 31761519 31761645 -40392237 + MER58B DNA MER1_type 179 295 -46 636 227 110 66 chr20 31761670 31761869 -40392013 + L1M4 LINE L1 3153 3342 -2804 1641 109 109 0 chr20 31761869 31762134 -40391748 - AluJo SINE Alu -18 294 1 636 227 110 66 chr20 31762134 31762344 -40391538 + L1M4 LINE L1 3342 3580 -2566 3124 178 111 77 chr20 31762356 31763214 -40390668 + MER21A LTR ERV1 9 895 -36 3432 189 69 140 chr20 31763273 31763554 -40390328 + L1M4 LINE L1 3689 3988 -2158 2183 122 42 11 chr20 31763554 31763907 -40389975 - THE1B LTR MaLR 0 364 1 3432 189 69 140 chr20 31763907 31764535 -40389347 + L1M4 LINE L1 3988 4659 -1487 1727 165 3 3 chr20 31764535 31764826 -40389056 - AluJb SINE Alu -21 291 1 3432 189 69 140 chr20 31764826 31764914 -40388968 + L1M4 LINE L1 4659 4752 -1394 731 137 8 0 chr20 31764914 31765031 -40388851 + AluJb SINE Alu 14 131 -181 3432 189 69 140 chr20 31765031 31765339 -40388543 + L1M4 LINE L1 4752 5080 -1066 1976 136 14 0 chr20 31765339 31765633 -40388249 + AluSx SINE Alu 1 298 -14 183 42 0 0 chr20 31765637 31765661 -40388221 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 3432 189 69 140 chr20 31765661 31765851 -40388031 + L1M4 LINE L1 5083 5193 -953 836 166 14 0 chr20 31766341 31766480 -40387402 + FLAM_C SINE Alu 2 142 -1 1908 98 45 21 chr20 31766892 31767030 -40386852 + AluSp SINE Alu 1 134 -179 2316 68 0 3 chr20 31767030 31767326 -40386556 + AluY SINE Alu 3 297 -14 1908 98 45 21 chr20 31767326 31767474 -40386408 + AluSp SINE Alu 134 294 -19 2144 93 0 10 chr20 31768362 31768653 -40385229 + AluSg SINE Alu 1 288 -22 357 24 0 0 chr20 31768655 31768697 -40385185 + (TAGA)n Simple_repeat Simple_repeat 4 45 0 2200 104 0 10 chr20 31768893 31769202 -40384680 + AluSq SINE Alu 1 306 -7 1870 130 10 3 chr20 31769769 31770087 -40383795 + AluSx SINE Alu 1 320 0 653 191 0 17 chr20 31770160 31770275 -40383607 + FLAM_C SINE Alu 6 118 -25 432 130 0 0 chr20 31770285 31770354 -40383528 + (TAGA)n Simple_repeat Simple_repeat 2 70 0 2225 119 0 0 chr20 31771834 31772146 -40381736 - AluSx SINE Alu 0 312 1 784 218 112 79 chr20 31772169 31772384 -40381498 - L1MC5 LINE L1 -32 7929 7723 1503 125 125 8 chr20 31772384 31772640 -40381242 + AluSg1 SINE Alu 11 296 -13 784 218 112 79 chr20 31772640 31772665 -40381217 - L1MC5 LINE L1 -238 7723 7700 2078 102 14 7 chr20 31772665 31772960 -40380922 - AluSx SINE Alu -15 297 1 784 218 112 79 chr20 31772960 31773200 -40380682 - L1MC5 LINE L1 -261 7700 7432 509 169 0 0 chr20 31773201 31773278 -40380604 - AluJ/FLAM SINE Alu -229 83 7 742 223 58 107 chr20 31773285 31773764 -40380118 - L1MC5 LINE L1 -526 7435 6980 1279 182 0 0 chr20 31773801 31774032 -40379850 + AluJb SINE Alu 1 231 -81 452 165 0 0 chr20 31774077 31774162 -40379720 + AluS SINE Alu 221 305 -4 1047 278 42 19 chr20 31774176 31774536 -40379346 - L1MC4 LINE L1 -974 7068 6701 2302 90 0 0 chr20 31774537 31774838 -40379044 - AluSq SINE Alu -12 301 1 7157 151 81 11 chr20 31775053 31776422 -40377460 + L1M4c LINE L1 22 1486 -4898 1039 206 101 66 chr20 31776422 31776556 -40377326 + AluJb SINE Alu 1 129 -173 2195 78 10 32 chr20 31776556 31776864 -40377018 + AluY SINE Alu 1 301 -10 1039 206 101 66 chr20 31776864 31777015 -40376867 + AluJb SINE Alu 129 296 -6 244 225 62 25 chr20 31777246 31777326 -40376556 + HAL1 LINE L1 2338 2420 -87 1541 157 25 7 chr20 31777380 31777666 -40376216 - AluJb SINE Alu -21 291 1 212 374 0 17 chr20 31778994 31779173 -40374709 + (CAGGG)n Simple_repeat Simple_repeat 1 176 0 577 239 122 61 chr20 31781435 31781648 -40372234 + MIR SINE MIR 27 252 -10 291 231 39 39 chr20 31782040 31782170 -40371712 + L1MC4a LINE L1 7028 7157 -651 758 247 117 0 chr20 31782644 31782891 -40370991 + L1M4c LINE L1 1192 1467 -4917 545 146 45 0 chr20 31782893 31782982 -40370900 + MER41A LTR ERV1 373 465 -89 459 0 0 0 chr20 31782982 31783033 -40370849 + (A)n Simple_repeat Simple_repeat 1 51 0 2124 110 0 28 chr20 31783035 31783354 -40370528 + AluSx SINE Alu 3 312 0 469 158 29 164 chr20 31783381 31783552 -40370330 + L1 LINE L1 4181 4328 -1818 1075 180 0 5 chr20 31783552 31783746 -40370136 + AluJo SINE Alu 1 193 -119 2058 165 112 31 chr20 31783746 31784194 -40369688 + MER51A LTR ERV1 1 484 -150 400 48 0 3 chr20 31784194 31784253 -40369629 - AluY SINE Alu -253 47 1 437 196 10 21 chr20 31784286 31784383 -40369499 - L1M4 LINE L1 -1367 4779 4684 2298 165 74 25 chr20 31785263 31785735 -40368147 - LTR34 LTR ERV1 0 699 205 2895 124 97 21 chr20 31785735 31786253 -40367629 + MER4D LTR ERV1 1 557 -346 424 100 0 0 chr20 31786255 31786325 -40367557 - Alu SINE Alu -1 311 242 710 214 37 37 chr20 31786325 31786512 -40367370 + MER4D LTR ERV1 717 903 0 320 267 69 35 chr20 31786970 31787086 -40366796 + L1MC/D LINE L1 5344 5463 -2345 418 199 106 20 chr20 31787101 31787318 -40366564 - MLT1B LTR MaLR -15 375 116 557 242 73 105 chr20 31787318 31787566 -40366316 + MER21B LTR ERV1 1 240 -623 1345 236 65 8 chr20 31787571 31787939 -40365943 + MER21B LTR ERV1 421 809 -54 764 139 9 0 chr20 31787970 31788085 -40365797 - MLT1B LTR MaLR -274 116 1 303 319 53 0 chr20 31788091 31788185 -40365697 + L1MC/D LINE L1 5489 5587 -2221 544 227 24 0 chr20 31788185 31788325 -40365557 + L1M4 LINE L1 5330 5472 -692 260 213 96 57 chr20 31788461 31788592 -40365290 + MIR3 SINE MIR 63 201 -7 275 204 44 66 chr20 31789323 31789504 -40364378 + (CCCCAG)n Simple_repeat Simple_repeat 2 178 0 231 208 33 71 chr20 31789553 31789736 -40364146 + (CCCCAG)n Simple_repeat Simple_repeat 1 176 0 1459 176 23 23 chr20 31790392 31790627 -40363255 + AluJb SINE Alu 10 247 -65 4721 164 15 37 chr20 31790627 31791618 -40362264 - LTR5 LTR ERVK 0 969 1 1459 176 23 23 chr20 31791618 31791683 -40362199 + AluJb SINE Alu 246 310 -2 1559 251 84 50 chr20 31791748 31792322 -40361560 - LTR34 LTR ERV1 -3 696 104 251 237 105 13 chr20 31792347 31792423 -40361459 - MER4C LTR ERV1 -354 111 29 698 181 0 31 chr20 31792537 31792664 -40361218 + FLAM_A SINE Alu 1 123 -10 821 194 13 0 chr20 31793389 31793544 -40360338 - FRAM SINE Alu -12 164 8 1460 158 0 74 chr20 31794787 31795084 -40358798 + AluJo SINE Alu 1 275 -37 207 0 0 0 chr20 31795091 31795114 -40358768 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 258 231 0 0 chr20 31795629 31795681 -40358201 - L1ME LINE L1 -526 5595 5544 246 286 0 24 chr20 31795773 31795857 -40358025 - L1ME3 LINE L1 -29 6133 6052 805 134 0 8 chr20 31795868 31795987 -40357895 + FLAM_C SINE Alu 1 118 -15 1947 105 0 0 chr20 31795993 31796259 -40357623 - AluSx SINE Alu -46 266 1 1614 189 0 10 chr20 31796283 31796585 -40357297 + AluJo SINE Alu 1 299 -13 1753 174 0 3 chr20 31796630 31796917 -40356965 + AluJb SINE Alu 5 290 -22 790 191 66 7 chr20 31796930 31797082 -40356800 + AluJb SINE Alu 123 283 -29 449 263 0 25 chr20 31797111 31797229 -40356653 + L1ME LINE L1 34 148 -5922 675 169 156 19 chr20 31797278 31797438 -40356444 + L1MB8 LINE L1 5992 6173 -5 658 196 78 87 chr20 31797466 31797533 -40356349 + L1ME LINE L1 2230 2296 -3784 1916 163 0 0 chr20 31797533 31797840 -40356042 + AluSx SINE Alu 1 307 -5 658 196 78 87 chr20 31797840 31798104 -40355778 + L1ME LINE L1 2296 2558 -3522 1883 141 0 38 chr20 31798131 31798451 -40355431 + AluSx SINE Alu 1 308 -4 1657 130 38 4 chr20 31798482 31798770 -40355112 - AluSx SINE Alu 0 310 14 21 0 0 0 chr20 31798783 31798804 -40355078 + AT_rich Low_complexity Low_complexity 1 21 0 2233 95 0 0 chr20 31799528 31799823 -40354059 - AluSc SINE Alu -14 295 1 1593 178 0 20 chr20 31799888 31800191 -40353691 - AluJo SINE Alu -15 297 1 1355 183 10 63 chr20 31800233 31800533 -40353349 - AluJo SINE Alu -28 284 1 1229 223 102 105 chr20 31801125 31801301 -40352581 + L1MDa LINE L1 1895 2070 -4470 6450 68 33 25 chr20 31801301 31803075 -40350807 + SVA Other Other 2 1385 -1 1229 223 102 105 chr20 31803075 31803170 -40350712 + L1MDa LINE L1 2070 2164 -4376 2241 74 3 0 chr20 31803170 31803454 -40350428 + AluY SINE Alu 1 285 -26 1229 223 102 105 chr20 31803454 31804175 -40349707 + L1MDa LINE L1 2164 2888 -3652 922 154 31 72 chr20 31804221 31804416 -40349466 + AluJo SINE Alu 1 187 -125 2122 114 0 25 chr20 31804422 31804606 -40349276 - AluSx SINE Alu 0 312 138 2033 132 0 0 chr20 31804606 31804902 -40348980 - AluSq SINE Alu -17 296 1 2122 114 0 25 chr20 31804902 31805032 -40348850 - AluSx SINE Alu -174 138 6 1168 220 67 113 chr20 31805033 31805574 -40348308 + L1MCa LINE L1 167 682 -5882 226 227 27 0 chr20 31805650 31805725 -40348157 + GA-rich Low_complexity Low_complexity 1 77 0 834 162 42 0 chr20 31805735 31805877 -40348005 + L1MCa LINE L1 564 711 -5334 2393 222 28 10 chr20 31805904 31806403 -40347479 + MLT2B3 LTR ERVL 1 508 -46 1912 198 20 11 chr20 31806476 31806920 -40346962 + L1MCa LINE L1 747 1194 -4851 866 215 6 0 chr20 31806933 31807105 -40346777 + FRAM SINE Alu 2 174 -2 1405 164 119 74 chr20 31807106 31807156 -40346726 + L1MCa LINE L1 1167 1213 -5351 1340 160 197 0 chr20 31807156 31807400 -40346482 + AluJo SINE Alu 1 292 -10 1405 164 119 74 chr20 31807400 31807770 -40346112 + L1MCa LINE L1 1213 1606 -4958 522 166 113 0 chr20 31807795 31807946 -40345936 + L1MCa LINE L1 1541 1708 -4856 * 1834 191 43 27 chr20 31807945 31808499 -40345383 + L1MCa LINE L1 3134 3696 -2868 351 302 44 63 chr20 31808625 31808686 -40345196 + L1MCa LINE L1 3757 3818 -2746 1641 168 3 13 chr20 31808686 31808995 -40344887 - AluJb SINE Alu -6 306 1 351 302 44 63 chr20 31808995 31809092 -40344790 + L1MCa LINE L1 3818 3912 -2652 794 129 0 40 chr20 31809093 31809217 -40344665 + FLAM_C SINE Alu 5 123 -20 2013 122 14 7 chr20 31809233 31809529 -40344353 + AluSx SINE Alu 2 299 -13 26 30 0 0 chr20 31809529 31809562 -40344320 + AT_rich Low_complexity Low_complexity 1 33 0 1776 127 24 14 chr20 31810187 31810478 -40343404 + AluSg SINE Alu 1 294 -16 2489 149 42 2 chr20 31810514 31810924 -40342958 + MSTA LTR MaLR 3 428 0 2118 100 27 7 chr20 31810979 31811279 -40342603 - AluSx SINE Alu -6 306 1 2054 133 3 3 chr20 31811870 31812178 -40341704 + AluSx SINE Alu 1 308 -4 666 205 157 6 chr20 31812724 31812890 -40340992 - MIR SINE MIR -1 261 71 2314 93 0 0 chr20 31813299 31813610 -40340272 + AluSq SINE Alu 1 311 -2 201 309 29 0 chr20 31814446 31814514 -40339368 - L3 LINE CR1 -5 1572 1503 249 263 111 76 chr20 31815173 31815344 -40338538 - MER104 DNA Tc2 -3 177 1 930 230 133 112 chr20 31815404 31815451 -40338431 - L1MC4 LINE L1 0 8042 7997 2466 56 3 0 chr20 31815451 31815753 -40338129 + AluY SINE Alu 1 303 -8 2029 105 23 7 chr20 31815755 31816060 -40337822 + AluSg SINE Alu 1 310 0 930 230 133 112 chr20 31816060 31816696 -40337186 - L1MC4 LINE L1 -45 7997 7342 1639 172 7 13 chr20 31816739 31817041 -40336841 - AluJb SINE Alu -7 305 6 2158 102 3 0 chr20 31818105 31818400 -40335482 - AluSp SINE Alu -1 312 17 1939 130 10 0 chr20 31818400 31818692 -40335190 - AluSx SINE Alu -17 295 1 2300 73 3 3 chr20 31818796 31819097 -40334785 + AluY SINE Alu 1 301 -10 216 0 0 0 chr20 31819127 31819151 -40334731 + (TTAAA)n Simple_repeat Simple_repeat 3 26 0 731 159 16 0 chr20 31819159 31819285 -40334597 + FLAM_A SINE Alu 14 141 -1 386 328 35 29 chr20 31819518 31819689 -40334193 + MIR SINE MIR 81 252 -10 254 253 27 13 chr20 31820098 31820173 -40333709 + MLT1K LTR MaLR 513 588 0 2065 114 0 3 chr20 31820335 31820633 -40333249 + AluSx SINE Alu 1 297 -15 204 209 47 0 chr20 31820695 31820738 -40333144 - MER5A DNA MER1_type -1 188 144 1998 116 7 23 chr20 31821443 31821745 -40332137 + AluSx SINE Alu 1 297 -15 2068 89 4 0 chr20 31822260 31822570 -40331312 + AluSc SINE Alu 1 311 0 708 142 63 16 chr20 31822646 31822773 -40331109 + AluJb SINE Alu 2 134 -178 7105 54 5 17 chr20 31823116 31824451 -40329431 + L1PA8 LINE L1 4841 6172 0 2013 65 50 11 chr20 31824473 31824790 -40329092 + AluSq SINE Alu 1 328 0 780 106 0 0 chr20 31826211 31826315 -40327567 + MER46A DNA MER2_type 1 104 -132 1628 138 16 41 chr20 31826316 31826636 -40327246 - AluJb SINE Alu 0 312 1 857 124 0 0 chr20 31826636 31826765 -40327117 - AluJb SINE Alu -183 129 1 797 124 108 0 chr20 31826765 31826894 -40326988 + MER46A DNA MER2_type 94 236 0 359 170 132 107 chr20 31826897 31827015 -40326867 - L2 LINE L2 -17 3296 3182 2070 106 27 0 chr20 31827015 31827307 -40326575 + AluSx SINE Alu 1 300 -12 1809 145 0 7 chr20 31827315 31827618 -40326264 + AluSx SINE Alu 1 301 -11 359 170 132 107 chr20 31827618 31827649 -40326233 - L2 LINE L2 -137 3176 3134 371 200 106 111 chr20 31828162 31828309 -40325573 + MIR SINE MIR 22 169 -93 1643 176 24 0 chr20 31828309 31828604 -40325278 - AluJb SINE Alu -8 304 3 371 200 106 111 chr20 31828604 31828636 -40325246 + MIR SINE MIR 169 200 -62 226 250 0 0 chr20 31828699 31828747 -40325135 - MER5B DNA MER1_type -49 129 82 2799 139 65 45 chr20 31828763 31829094 -40324788 - MER21A LTR ERV1 -34 897 551 2074 121 0 3 chr20 31829094 31829400 -40324482 - AluSx SINE Alu -7 305 1 2799 139 65 45 chr20 31829400 31829580 -40324302 - MER21A LTR ERV1 -380 551 376 770 155 263 24 chr20 31829585 31829653 -40324229 - MER21A LTR ERV1 -667 264 214 2101 105 0 10 chr20 31829653 31829957 -40323925 + AluSc SINE Alu 1 301 -8 770 155 263 24 chr20 31829957 31830101 -40323781 - MER21A LTR ERV1 -717 214 1 313 240 94 0 chr20 31830102 31830198 -40323684 + L2 LINE L2 2434 2538 -776 1695 121 7 15 chr20 31830216 31830489 -40323393 + AluSq SINE Alu 41 311 -2 407 266 0 0 chr20 31830489 31830602 -40323280 - L1MD3 LINE L1 -12 7983 7871 536 180 193 7 chr20 31830628 31830778 -40323104 - L1ME3A LINE L1 -10 6160 5983 4006 56 48 0 chr20 31831416 31831917 -40321965 - LTR17 LTR ERV1 0 780 256 523 167 61 68 chr20 31831942 31832074 -40321808 - L1MD3 LINE L1 -107 7873 7571 935 164 0 68 chr20 31832335 31832512 -40321370 + FRAM SINE Alu 1 165 -1 2076 112 7 0 chr20 31833374 31833669 -40320213 + AluSp SINE Alu 2 298 -15 1483 184 0 4 chr20 31833680 31833947 -40319935 + AluJb SINE Alu 1 266 -46 2326 86 3 0 chr20 31834659 31834961 -40318921 - AluSp SINE Alu -10 303 1 1781 128 77 0 chr20 31835385 31835659 -40318223 - AluSx SINE Alu -17 295 1 4219 213 161 102 chr20 31835704 31836230 -40317652 - L1MC3 LINE L1 -8 7777 7284 456 218 9 55 chr20 31836230 31836245 -40317637 - MLT1F1 LTR MaLR -428 139 125 1858 138 3 0 chr20 31836245 31836542 -40317340 - AluJb SINE Alu -14 298 1 456 218 9 55 chr20 31836542 31836636 -40317246 - MLT1F1 LTR MaLR -442 125 35 4219 213 161 102 chr20 31836636 31837300 -40316582 - L1MC3 LINE L1 -501 7284 6661 1812 161 3 3 chr20 31837300 31837598 -40316284 - AluJb SINE Alu -14 298 1 4219 213 161 102 chr20 31837598 31837967 -40315915 - L1MC3 LINE L1 -1124 6661 6316 2466 101 8 8 chr20 31837967 31838322 -40315560 + THE1A LTR MaLR 1 355 0 4219 213 161 102 chr20 31838322 31838465 -40315417 - L1MC3 LINE L1 -1469 6316 6183 2173 114 0 0 chr20 31838465 31838771 -40315111 - AluSc SINE Alu -3 306 1 4219 213 161 102 chr20 31838771 31838875 -40315007 - L1MC3 LINE L1 -1602 6183 6087 1624 173 3 19 chr20 31838875 31839182 -40314700 + AluJo SINE Alu 1 302 -10 4219 213 161 102 chr20 31839182 31839449 -40314433 - L1MC3 LINE L1 -1698 6087 5460 2258 111 0 0 chr20 31839776 31840083 -40313799 + AluSx SINE Alu 1 307 -5 291 202 141 30 chr20 31840353 31840452 -40313430 + L2 LINE L2 3197 3306 -7 1609 182 38 54 chr20 31840498 31840889 -40312993 - MLT1B LTR MaLR 0 390 6 534 160 29 11 chr20 31841480 31841655 -40312227 + (TCTCTG)n Simple_repeat Simple_repeat 3 180 0 435 234 0 62 chr20 31841901 31842093 -40311789 + (CA)n Simple_repeat Simple_repeat 1 180 0 779 189 0 0 chr20 31843944 31844076 -40309806 + FLAM_C SINE Alu 2 133 0 1761 137 17 14 chr20 31844609 31844901 -40308981 - AluSx SINE Alu -14 298 6 2060 104 3 16 chr20 31845236 31845544 -40308338 + AluSx SINE Alu 1 304 -8 21 36 0 0 chr20 31845749 31845777 -40308105 + AT_rich Low_complexity Low_complexity 1 28 0 2177 87 35 0 chr20 31846080 31846369 -40307513 + AluSc SINE Alu 1 299 -10 1581 183 3 20 chr20 31846380 31846686 -40307196 + AluJb SINE Alu 1 301 -11 589 152 18 91 chr20 31847057 31847239 -40306643 + MLT1G1 LTR MaLR 234 389 -206 261 233 14 27 chr20 31847212 31847285 -40306597 + MLT1G1 LTR MaLR 331 402 -153 * 318 150 12 50 chr20 31847273 31847353 -40306529 + MLT1G1 LTR MaLR 519 595 0 882 125 0 22 chr20 31847373 31847509 -40306373 - FLAM_C SINE Alu 0 133 1 1873 141 20 3 chr20 31847700 31847999 -40305883 + AluJb SINE Alu 1 304 -8 26 30 0 0 chr20 31848339 31848372 -40305510 + AT_rich Low_complexity Low_complexity 1 33 0 299 224 45 15 chr20 31848390 31848457 -40305425 - L2 LINE L2 -5 3308 3240 492 305 24 24 chr20 31848463 31848630 -40305252 - L2 LINE L2 -881 2433 2267 497 164 0 0 chr20 31848809 31848882 -40305000 - AluJ/FLAM SINE Alu -239 73 1 2004 133 0 0 chr20 31848912 31849205 -40304677 + AluSx SINE Alu 1 293 -19 1556 160 0 62 chr20 31849221 31849528 -40304354 - AluJo SINE Alu -24 288 1 1894 288 97 17 chr20 31850141 31850978 -40302904 + HAL1 LINE L1 2 905 -1602 2273 81 0 3 chr20 31851130 31851427 -40302455 + AluSc SINE Alu 1 296 -13 279 0 0 0 chr20 31851503 31851534 -40302348 + (TA)n Simple_repeat Simple_repeat 1 31 0 1414 123 26 0 chr20 31851554 31851781 -40302101 - AluSx SINE Alu -20 292 60 1708 174 0 13 chr20 31851796 31852100 -40301782 + AluJo SINE Alu 1 300 -12 1451 215 169 51 chr20 31852102 31852787 -40301095 + HAL1 LINE L1 1059 1824 -683 824 152 0 36 chr20 31853015 31853153 -40300729 + FLAM_C SINE Alu 2 134 -9 233 163 20 0 chr20 31853409 31853458 -40300424 + (TA)n Simple_repeat Simple_repeat 1 50 0 1619 170 24 7 chr20 31854990 31855278 -40298604 + AluJb SINE Alu 1 293 -19 868 145 8 0 chr20 31857189 31857320 -40296562 + FLAM_C SINE Alu 1 132 -1 1938 139 3 0 chr20 31857501 31857795 -40296087 - AluSx SINE Alu -17 295 1 2007 129 0 0 chr20 31857806 31858101 -40295781 - AluSx SINE Alu -17 295 1 216 320 127 36 chr20 31858562 31858785 -40295097 - L2 LINE L2 -236 3036 2798 772 301 111 23 chr20 31858830 31859225 -40294657 + LTR16C LTR ERVL 55 484 -7 1423 170 47 37 chr20 31859406 31859706 -40294176 - AluJo SINE Alu -9 303 1 2439 162 35 28 chr20 31860900 31861357 -40292525 + LTR32 LTR ERVL 12 471 0 275 295 244 14 chr20 31861428 31861645 -40292237 + L2 LINE L2 2974 3240 -73 2432 42 3 0 chr20 31861851 31862137 -40291745 - AluY SINE Alu -24 287 1 235 331 110 49 chr20 31862367 31862530 -40291352 - L2 LINE L2 -546 2768 2596 267 295 101 16 chr20 31862660 31862789 -40291093 - MIR SINE MIR -102 160 21 235 325 86 52 chr20 31862951 31863299 -40290583 - L2 LINE L2 -1339 1975 1616 988 216 78 51 chr20 31865188 31865230 -40288652 + MER58B DNA MER1_type 37 76 -2344 2325 82 0 25 chr20 31865230 31865548 -40288334 - AluSg SINE Alu 0 310 1 988 216 78 51 chr20 31865548 31865801 -40288081 + MER58B DNA MER1_type 76 340 -1 2307 113 18 0 chr20 31866378 31866706 -40287176 + HERVK22 LTR ERVK 574 907 -6336 2109 169 0 0 chr20 31866696 31867033 -40286849 + HERVK22 LTR ERVK 282 618 -6219 * 2219 169 19 24 chr20 31867067 31867480 -40286402 - LTR3 LTR ERVK -16 416 6 2091 128 3 0 chr20 31867552 31867841 -40286041 - AluSq SINE Alu -23 290 1 180 0 0 0 chr20 31867847 31867867 -40286015 + (ATTG)n Simple_repeat Simple_repeat 4 23 0 1824 129 65 0 chr20 31867867 31868130 -40285752 - AluSx SINE Alu -32 280 1 695 156 0 33 chr20 31868133 31868255 -40285627 - AluJb SINE Alu -9 303 186 1097 159 95 95 chr20 31868292 31868618 -40285264 - THE1C LTR MaLR -49 326 1 502 292 129 54 chr20 31868618 31868991 -40284891 - MLT1J2 LTR MaLR -3 447 47 7658 50 2 5 chr20 31870736 31871883 -40281999 - L1PA6 LINE L1 0 6154 5010 1761 181 7 0 chr20 31872068 31872360 -40281522 + AluJo SINE Alu 10 303 -9 1451 225 73 60 chr20 31872667 31872956 -40280926 + L2 LINE L2 1722 2023 -1291 2061 144 0 22 chr20 31872956 31873275 -40280607 - AluSx SINE Alu 0 312 1 1451 225 73 60 chr20 31873275 31873506 -40280376 + L2 LINE L2 2023 2249 -1065 796 252 154 66 chr20 31873550 31873990 -40279892 + L1MB4 LINE L1 5362 5840 -340 2074 141 0 0 chr20 31874313 31874612 -40279270 - AluSx SINE Alu -13 299 1 2429 178 64 2 chr20 31874974 31875000 -40278882 - L1 LINE L1 -836 5310 5287 1869 131 4 4 chr20 31875000 31875268 -40278614 - AluSx SINE Alu -44 268 1 2429 178 64 2 chr20 31875268 31875741 -40278141 - L1 LINE L1 -859 5287 4780 1804 152 3 33 chr20 31875741 31875877 -40278005 - MER4A LTR ERV1 0 664 525 2095 108 4 0 chr20 31875877 31876179 -40277703 - AluSg1 SINE Alu 0 303 1 1804 152 3 33 chr20 31876179 31876396 -40277486 - MER4A LTR ERV1 -139 525 262 582 163 0 10 chr20 31876398 31876496 -40277386 - MER4A LTR ERV1 -567 97 1 17078 108 45 10 chr20 31876504 31879171 -40274711 - MER4A-int LTR ERV1 -2 6596 3837 8972 112 158 128 chr20 31879170 31879528 -40274354 - MER4A-int LTR ERV1 -2917 3681 3335 * 2062 129 7 20 chr20 31879528 31879830 -40274052 - AluSx SINE Alu -14 298 1 8972 112 158 128 chr20 31879830 31879935 -40273947 - MER4A-int LTR ERV1 -3263 3335 3235 477 0 0 0 chr20 31879941 31879994 -40273888 + (TA)n Simple_repeat Simple_repeat 2 54 0 2381 76 3 3 chr20 31879994 31880289 -40273593 - AluSc SINE Alu -11 298 1 8972 112 158 128 chr20 31880289 31882090 -40271792 - MER4A-int LTR ERV1 -3363 3235 1489 2434 94 3 0 chr20 31882090 31882399 -40271483 - AluSx SINE Alu -2 310 1 1723 109 0 83 chr20 31882399 31882675 -40271207 - AluSx SINE Alu -59 253 1 8972 112 158 128 chr20 31882675 31882874 -40271008 - MER4A-int LTR ERV1 -5109 1489 1297 252 0 0 0 chr20 31882874 31882902 -40270980 + (CA)n Simple_repeat Simple_repeat 2 29 0 8972 112 158 128 chr20 31882902 31883045 -40270837 - MER4A-int LTR ERV1 -5301 1297 993 253 156 0 44 chr20 31883065 31883110 -40270772 - LTR49 LTR ERV1 -282 313 271 332 127 0 70 chr20 31883110 31883181 -40270701 - MER4A-int LTR ERV1 -5845 753 688 378 0 0 0 chr20 31883188 31883230 -40270652 + (TG)n Simple_repeat Simple_repeat 1 42 0 2379 137 53 25 chr20 31883230 31883875 -40270007 - MER4A-int LTR ERV1 -5792 806 1 1896 99 6 73 chr20 31883878 31883969 -40269913 - MER4A LTR ERV1 0 664 568 1607 266 43 68 chr20 31883969 31884597 -40269285 - LTR9 LTR ERV1 0 612 1 1896 99 6 73 chr20 31884597 31884819 -40269063 - MER4A LTR ERV1 -96 568 372 348 115 19 0 chr20 31884819 31884871 -40269011 - MER4A LTR ERV1 -351 313 261 671 110 0 20 chr20 31884871 31884971 -40268911 - MER4A LTR ERV1 -566 98 1 4789 190 26 97 chr20 31884971 31885391 -40268491 - L1 LINE L1 -807 5339 4891 2300 88 3 25 chr20 31885391 31885708 -40268174 - AluSp SINE Alu -3 310 1 4789 190 26 97 chr20 31885708 31885794 -40268088 - L1 LINE L1 -1255 4891 4800 1861 139 4 0 chr20 31885794 31886061 -40267821 - AluJo SINE Alu -16 296 29 4789 190 26 97 chr20 31886061 31886809 -40267073 - L1 LINE L1 -1346 4800 4000 2384 91 0 0 chr20 31886809 31887105 -40266777 - AluSg SINE Alu -14 296 1 4789 190 26 97 chr20 31887105 31887406 -40266476 - L1 LINE L1 -2146 4000 4019 2067 130 20 0 chr20 31887406 31887698 -40266184 - AluSx SINE Alu -14 298 1 4789 190 26 97 chr20 31887698 31887822 -40266060 - L1 LINE L1 -2126 4020 3889 2354 96 0 16 chr20 31888635 31888938 -40264944 - AluSp SINE Alu -15 298 1 321 276 82 22 chr20 31889022 31889156 -40264726 - MIR SINE MIR -101 161 20 3249 191 29 34 chr20 31889266 31890040 -40263842 - L1MA4 LINE L1 0 6171 5352 227 160 0 20 chr20 31890062 31890112 -40263770 - L1MA4 LINE L1 -932 5373 5325 853 199 0 13 chr20 31890114 31890270 -40263612 - FRAM SINE Alu 0 176 23 11195 174 33 54 chr20 31890270 31891000 -40262882 - L1 LINE L1 -1015 6550 5806 2038 103 0 60 chr20 31891000 31891301 -40262581 - AluSc SINE Alu -26 283 1 11195 174 33 54 chr20 31891301 31891379 -40262503 - L1 LINE L1 -1759 5806 5728 2303 112 3 6 chr20 31891379 31891693 -40262189 - AluSp SINE Alu 0 313 1 11195 174 33 54 chr20 31891693 31892719 -40261163 - L1 LINE L1 -1837 5728 4682 4897 139 19 65 chr20 31892719 31893431 -40260451 - LTR25 LTR ERV1 0 794 124 2314 80 0 3 chr20 31893431 31893718 -40260164 - AluSc SINE Alu -15 294 9 4897 139 19 65 chr20 31893718 31893837 -40260045 - LTR25 LTR ERV1 -670 124 1 11195 174 33 54 chr20 31893837 31893973 -40259909 - L1 LINE L1 -2883 4682 4545 1824 154 34 0 chr20 31893973 31894266 -40259616 + AluJb SINE Alu 1 303 -9 11195 174 33 54 chr20 31894266 31894554 -40259328 - L1 LINE L1 -3020 4545 4253 1661 188 3 16 chr20 31894554 31894857 -40259025 + AluJb SINE Alu 1 299 -13 1537 226 49 7 chr20 31894861 31895166 -40258716 - 7SLRNA srpRNA srpRNA -2 318 1 11195 174 33 54 chr20 31895166 31895462 -40258420 - L1 LINE L1 -3315 4250 3949 2113 88 57 27 chr20 31895462 31895758 -40258124 - AluSx SINE Alu -7 305 1 11195 174 33 54 chr20 31895758 31895968 -40257914 - L1 LINE L1 -3616 3949 3736 2326 78 0 0 chr20 31895968 31896277 -40257605 - AluY SINE Alu 0 309 1 11195 174 33 54 chr20 31896277 31896909 -40256973 - L1 LINE L1 -3829 3736 3214 1684 175 17 3 chr20 31896910 31897202 -40256680 - AluSq SINE Alu -17 296 1 2140 216 44 4 chr20 31897233 31897755 -40256127 - L1 LINE L1 -4528 3037 2495 1507 165 79 10 chr20 31897758 31898049 -40255833 - AluJb SINE Alu -1 311 1 4453 196 62 3 chr20 31898049 31898935 -40254947 - L1 LINE L1 -4362 2203 1266 1115 179 36 0 chr20 31899491 31899686 -40254196 + AluJo SINE Alu 1 202 -110 297 154 0 0 chr20 31899690 31899742 -40254140 + FAM SINE Alu 128 179 0 1174 246 120 14 chr20 31900195 31900553 -40253329 - MER89 LTR ERV1 0 559 164 1406 231 32 21 chr20 31900709 31901047 -40252835 - L1MB5 LINE L1 -8 6166 5825 705 148 0 17 chr20 31901056 31901171 -40252711 - AluJb SINE Alu 0 312 200 1829 141 10 17 chr20 31901171 31901462 -40252420 - MER1B DNA MER1_type -50 289 1 373 197 56 0 chr20 31901615 31901686 -40252196 + MER2 DNA MER2_type 266 340 -5 1846 175 51 6 chr20 31901690 31902045 -40251837 + L1MB2 LINE L1 5783 6153 -18 1838 150 42 18 chr20 31902052 31902338 -40251544 - AluJo SINE Alu -19 293 1 2063 118 7 3 chr20 31902428 31902717 -40251165 + AluJo SINE Alu 7 296 -16 2347 52 0 43 chr20 31903122 31903427 -40250455 - AluY SINE Alu -19 292 1 2431 162 55 55 chr20 31903434 31903982 -40249900 - L1 LINE L1 -1826 4320 3773 243 0 0 0 chr20 31903994 31904021 -40249861 + (TTAA)n Simple_repeat Simple_repeat 2 28 0 2121 124 0 0 chr20 31904022 31904305 -40249577 - AluSx SINE Alu -27 285 3 287 236 51 51 chr20 31904313 31904329 -40249553 - L1MA10 LINE L1 -1 6333 6318 989 214 96 7 chr20 31904329 31904609 -40249273 - L1ME1 LINE L1 -4 6162 5858 5839 203 58 8 chr20 31904619 31905243 -40248639 - L1MA4 LINE L1 -7 6293 5702 2289 113 10 0 chr20 31905243 31905545 -40248337 - AluSx SINE Alu -7 305 1 5839 203 58 8 chr20 31905545 31907633 -40246249 - L1MA4 LINE L1 -598 5702 3437 2192 105 10 13 chr20 31907799 31908105 -40245777 + AluSg SINE Alu 1 305 -5 2319 87 0 7 chr20 31908105 31908402 -40245480 + AluSg1 SINE Alu 1 296 -13 638 172 16 0 chr20 31910692 31910814 -40243068 - L1MA4 LINE L1 -2699 3447 3324 * 1511 209 42 34 chr20 31910808 31910874 -40243008 - L1MA4 LINE L1 -3311 2835 2771 2389 72 14 0 chr20 31910874 31911166 -40242716 - AluY SINE Alu -15 296 1 1511 209 42 34 chr20 31911166 31911188 -40242694 - L1MA4 LINE L1 -3375 2771 2751 1440 185 31 27 chr20 31911188 31911480 -40242402 + AluJo SINE Alu 1 293 -19 1511 209 42 34 chr20 31911480 31911797 -40242085 - L1MA4 LINE L1 -3395 2751 2426 490 321 75 34 chr20 31911812 31912080 -40241802 - ERVL LTR ERVL -1217 4547 4269 1319 208 156 80 chr20 31912256 31912358 -40241524 - MER45B DNA AcHobo -552 1029 936 290 155 14 0 chr20 31912358 31912368 -40241514 + (TA)n Simple_repeat Simple_repeat 2 10 -63 2336 110 0 0 chr20 31912368 31912667 -40241215 + AluSg SINE Alu 1 299 -11 290 155 14 0 chr20 31912667 31912727 -40241155 + (TA)n Simple_repeat Simple_repeat 10 73 0 1319 208 156 80 chr20 31912727 31912895 -40240987 - MER45B DNA AcHobo -645 936 782 1625 199 31 0 chr20 31912895 31913182 -40240700 - AluJb SINE Alu -11 301 6 1319 208 156 80 chr20 31913182 31913493 -40240389 - MER45B DNA AcHobo -799 782 327 323 180 131 0 chr20 31913509 31913570 -40240312 + MER45B DNA AcHobo 252 320 -720 1091 172 27 160 chr20 31914453 31914865 -40239017 - MLT1A1 LTR MaLR -3 362 6 299 238 50 12 chr20 31914961 31915041 -40238841 - LTR16B LTR ERVL -288 176 94 8221 170 67 32 chr20 31917327 31917825 -40236057 + L1MA4 LINE L1 3456 3935 -2365 1812 142 3 61 chr20 31917825 31918136 -40235746 - AluJb SINE Alu -19 293 1 8221 170 67 32 chr20 31918136 31918948 -40234934 + L1MA4 LINE L1 3935 4716 -1584 1666 162 30 17 chr20 31918948 31919245 -40234637 + AluJo SINE Alu 1 301 -11 8221 170 67 32 chr20 31919245 31920689 -40233193 + L1MA4 LINE L1 4716 6300 0 290 242 15 0 chr20 31921084 31921150 -40232732 + LTR37B LTR ERV1 346 412 -56 786 202 10 13 chr20 31921270 31921555 -40232327 + MLT1A2 LTR MaLR 5 351 -23 760 262 32 40 chr20 31921825 31922077 -40231805 + L1ME2 LINE L1 5895 6144 -20 368 252 29 10 chr20 31922522 31922625 -40231257 + L1MC5 LINE L1 7734 7838 -123 2117 121 3 10 chr20 31922835 31923133 -40230749 + AluSq SINE Alu 1 296 -17 369 0 0 0 chr20 31923514 31923555 -40230327 + (CAT)n Simple_repeat Simple_repeat 2 42 0 7614 42 9 1 chr20 31923765 31924649 -40229233 + L1PA3 LINE L1 5263 6153 -2 31 0 0 0 chr20 31924649 31924680 -40229202 + AT_rich Low_complexity Low_complexity 1 31 0 6060 67 1 3 chr20 31924680 31925422 -40228460 + L1PA7 LINE L1 5413 6153 -1 216 0 0 0 chr20 31925493 31925517 -40228365 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 325 218 188 64 chr20 31927305 31927603 -40226279 + L1MC5 LINE L1 7554 7888 -73 2621 122 112 2 chr20 31927868 31928287 -40225595 + MER4C LTR ERV1 1 465 0 262 296 0 0 chr20 31928391 31928472 -40225410 - L1M4 LINE L1 -1034 5923 5843 * 1160 274 82 21 chr20 31928451 31928972 -40224910 - L1M4 LINE L1 -1718 5239 4687 827 122 23 0 chr20 31928986 31929117 -40224765 + MER4C LTR ERV1 2 135 -330 2149 52 19 42 chr20 31929132 31929439 -40224443 + AluY SINE Alu 2 301 -10 1218 104 0 0 chr20 31929439 31929602 -40224280 + AluY SINE Alu 133 295 -16 288 89 0 22 chr20 31929602 31929647 -40224235 + MER4C LTR ERV1 128 171 -294 282 341 0 0 chr20 31929657 31929742 -40224140 - L1M4 LINE L1 -2334 4623 4539 473 213 125 31 chr20 31929747 31929907 -40223975 + L1ME2 LINE L1 5980 6154 -10 1590 184 65 0 chr20 31930288 31930581 -40223301 + AluJb SINE Alu 1 312 0 1426 232 171 29 chr20 31930996 31931768 -40222114 + L1M4c LINE L1 548 1429 -4955 1239 268 36 43 chr20 31931765 31932179 -40221703 - L1M4 LINE L1 -6436 423 13 * 339 269 69 113 chr20 31932537 31932872 -40221010 + L1MC5 LINE L1 7609 7928 -33 410 194 60 27 chr20 31933133 31933286 -40220596 + L1ME1 LINE L1 6028 6161 -5 2070 122 7 0 chr20 31933375 31933661 -40220221 - AluSx SINE Alu -24 288 1 653 286 76 13 chr20 31934409 31934647 -40219235 - MIR SINE MIR -1 261 9 2244 201 68 105 chr20 31934911 31935279 -40218603 + MER4E LTR ERV1 1 381 -398 2238 104 0 10 chr20 31935279 31935588 -40218294 + AluSx SINE Alu 7 312 0 2244 201 68 105 chr20 31935588 31935842 -40218040 + MER4E LTR ERV1 381 591 -188 1297 171 123 34 chr20 31935842 31936111 -40217771 - AluJo SINE Alu -9 293 1 2244 201 68 105 chr20 31936111 31936269 -40217613 + MER4E LTR ERV1 591 753 -26 36 29 0 43 chr20 31937666 31937735 -40216147 + AT_rich Low_complexity Low_complexity 1 66 0 10781 170 30 11 chr20 31937976 31941010 -40212872 - L1MA4 LINE L1 -2 7000 3909 * 31971 106 15 59 chr20 31941000 31947437 -40206445 - L1PA7 LINE L1 -4 6150 12 3354 201 35 60 chr20 31947446 31948750 -40205132 - L1MA4 LINE L1 -2923 3925 2645 31609 79 6 9 chr20 31948781 31953935 -40199947 - L1PA7 LINE L1 0 6154 1018 44096 45 1 3 chr20 31953941 31960098 -40193784 - L1PA3 LINE L1 -5 6150 7 5557 168 16 26 chr20 31960112 31961146 -40192736 - L1PA7 LINE L1 -5112 1034 11 225 220 0 0 chr20 31961189 31961239 -40192643 - Tigger3(Golem) DNA MER2_type -2782 247 198 2666 152 75 6 chr20 31961242 31961736 -40192146 - L1PB4 LINE L1 -2 6154 5627 2149 117 10 13 chr20 32161740 32162048 -39991834 + AluSx SINE Alu 6 312 0 263 316 79 72 chr20 32162065 32162204 -39991678 - L2 LINE L2 -9 3263 3124 * 283 237 53 0 chr20 32162171 32162247 -39991635 - L2 LINE L2 -308 2964 2885 2370 88 3 0 chr20 32162248 32162545 -39991337 + AluY SINE Alu 1 298 -13 2333 112 0 0 chr20 32162563 32162876 -39991006 + AluSq SINE Alu 1 313 0 710 176 145 0 chr20 32163001 32163154 -39990728 + AluSg/x SINE Alu 133 304 0 1682 136 101 0 chr20 32163431 32163717 -39990165 + AluSx SINE Alu 1 312 0 308 214 0 54 chr20 32164022 32164068 -39989814 - MIR SINE MIR -64 144 151 2115 127 0 7 chr20 32164068 32164367 -39989515 - AluSx SINE Alu -15 297 1 308 214 0 54 chr20 32164367 32164437 -39989445 - MIR SINE MIR -56 152 80 1835 118 57 7 chr20 32164658 32164937 -39988945 - AluSx SINE Alu -19 293 1 2587 75 0 0 chr20 32164938 32165246 -39988636 - AluSx SINE Alu -4 308 1 279 50 0 0 chr20 32165771 32165811 -39988071 - AluSx SINE Alu -3 298 259 1541 131 5 0 chr20 32165811 32166032 -39987850 - AluSx SINE Alu -90 222 1 2308 103 3 0 chr20 32166042 32166344 -39987538 - AluSx SINE Alu -9 303 1 732 240 17 6 chr20 32166344 32166519 -39987363 - MLT1G1 LTR MaLR -379 216 40 2570 80 27 0 chr20 32166539 32166876 -39987006 - L1PA10 LINE L1 0 6168 5823 968 158 6 0 chr20 32166876 32167034 -39986848 - FRAM SINE Alu -7 159 1 670 185 0 0 chr20 32167228 32167336 -39986546 + AluJ SINE Alu 2 109 -203 2150 100 4 4 chr20 32167348 32167667 -39986215 - AluSc SINE Alu 0 319 1 880 152 18 61 chr20 32167671 32167726 -39986156 - L1MDa LINE L1 -6366 174 118 2125 151 0 0 chr20 32167726 32168037 -39985845 - AluSx SINE Alu -1 311 1 880 152 18 61 chr20 32168037 32168145 -39985737 - L1MDa LINE L1 -6422 118 18 920 214 49 35 chr20 32168227 32168512 -39985370 - L1MC5 LINE L1 -493 7468 7180 708 272 210 7 chr20 32168506 32168815 -39985067 + L1MC/D LINE L1 5355 5726 -2082 * 1246 173 10 10 chr20 32168819 32169027 -39984855 + AluJb SINE Alu 87 294 -18 681 267 54 47 chr20 32169183 32169441 -39984441 + LTR16C LTR ERVL 135 394 -97 2411 63 7 7 chr20 32169575 32169877 -39984005 + AluY SINE Alu 1 302 -9 1683 125 14 35 chr20 32171487 32171804 -39982078 + L1PA8 LINE L1 5875 6185 0 3853 220 14 36 chr20 32171804 32172833 -39981049 - L1M2 LINE L1 -1921 5246 4241 11255 174 16 19 chr20 32172850 32173758 -39980124 - L1PA13 LINE L1 -6 6808 5899 2303 127 82 17 chr20 32173758 32174160 -39979722 - MSTA LTR MaLR 0 428 1 11255 174 16 19 chr20 32174160 32176210 -39977672 - L1PA13 LINE L1 -915 5899 3818 3813 147 18 0 chr20 32176226 32176798 -39977084 - L1PA13 LINE L1 -6205 582 1 930 236 40 37 chr20 32176815 32177113 -39976769 - L1M2 LINE L1 -2932 4235 3934 2652 55 0 0 chr20 32177113 32177423 -39976459 - AluY SINE Alu -1 310 1 930 236 40 37 chr20 32177423 32177472 -39976410 - L1M2 LINE L1 -3233 3934 3887 4405 239 167 38 chr20 32177478 32178601 -39975281 + L1 LINE L1 1 978 -6059 1368 183 25 110 chr20 32178601 32179000 -39974882 - MLT1A1 LTR MaLR 0 365 1 4405 239 167 38 chr20 32179000 32179971 -39973911 + L1 LINE L1 978 2465 -4572 7436 171 28 12 chr20 32179979 32181445 -39972437 + L1 LINE L1 4643 6131 -975 27 0 0 0 chr20 32181554 32181581 -39972301 + AT_rich Low_complexity Low_complexity 1 27 0 1918 86 0 0 chr20 32182482 32182714 -39971168 - AluSx SINE Alu -69 243 12 5380 239 171 27 chr20 32182723 32184749 -39969133 - L1 LINE L1 -4450 2399 63 368 185 0 12 chr20 32184749 32184830 -39969052 + MADE1 DNA Mariner 1 80 0 5380 239 171 27 chr20 32184830 32184892 -39968990 - L1 LINE L1 -6786 63 11 2418 266 62 50 chr20 32184898 32185748 -39968134 - L1M2 LINE L1 -4172 2996 2107 2205 122 7 0 chr20 32185748 32186044 -39967838 - AluSx SINE Alu -14 298 1 2418 266 62 50 chr20 32186044 32186664 -39967218 - L1M2 LINE L1 -5061 2107 1496 186 103 0 0 chr20 32187357 32187386 -39966496 + (GA)n Simple_repeat Simple_repeat 2 30 0 1073 157 0 20 chr20 32187431 32187629 -39966253 - L1PB1 LINE L1 -1 6150 5957 244 303 112 20 chr20 32187703 32187855 -39966027 - MIR SINE MIR -66 196 31 632 118 0 0 chr20 32187862 32187947 -39965935 + L1PA5 LINE L1 11 95 -6051 36722 63 5 7 chr20 32187947 32193489 -39960393 + L1PA5 LINE L1 622 6152 -2 27 31 0 62 chr20 32193897 32193961 -39959921 + AT_rich Low_complexity Low_complexity 1 60 0 1912 194 7 61 chr20 32194930 32195342 -39958540 - MLT1B LTR MaLR 0 390 1 694 250 68 14 chr20 32196128 32196348 -39957534 + MIR SINE MIR 23 254 -8 272 196 0 0 chr20 32197418 32197469 -39956413 - L2 LINE L2 -2 3311 3261 271 319 0 0 chr20 32199903 32199997 -39953885 - MIR SINE MIR -12 250 157 466 284 117 44 chr20 32200104 32200421 -39953461 + L3 LINE CR1 1178 1517 -60 204 127 127 0 chr20 32200511 32200566 -39953316 - L2 LINE L2 -157 3156 3095 222 204 0 0 chr20 32200579 32200623 -39953259 + (TG)n Simple_repeat Simple_repeat 1 44 0 210 91 0 0 chr20 32200900 32200933 -39952949 + (TG)n Simple_repeat Simple_repeat 2 34 0 680 313 34 11 chr20 32200961 32201308 -39952574 - L2 LINE L2 -204 3109 2752 2107 115 3 0 chr20 32201637 32201923 -39951959 - AluSx SINE Alu -25 287 1 304 176 24 47 chr20 32201927 32202012 -39951870 - MER113 DNA MER1_type? -428 93 11 371 301 15 30 chr20 32202034 32202167 -39951715 - MIR3 SINE MIR -65 143 13 1646 212 136 43 chr20 32202226 32202557 -39951325 - L1MD2 LINE L1 -11 6231 5877 2110 118 28 0 chr20 32202557 32202844 -39951038 - AluSx SINE Alu -17 295 1 1646 212 136 43 chr20 32202844 32203106 -39950776 - L1MD2 LINE L1 -365 5877 5641 * 4415 184 14 51 chr20 32203104 32204549 -39949333 - L1MA6 LINE L1 -317 5983 4597 2106 117 75 3 chr20 32204553 32204887 -39948995 + MER83 LTR ERV1 91 448 0 2355 114 0 38 chr20 32204889 32204917 -39948965 - Tigger2a DNA MER2_type -2351 357 329 2739 141 27 14 chr20 32204917 32205356 -39948526 + MER65A LTR ERV1 1 445 0 2355 114 0 38 chr20 32205356 32205696 -39948186 - Tigger2a DNA MER2_type -2379 329 3 604 248 63 76 chr20 32205701 32206004 -39947878 + LTR57-int LTR ERVL 1274 1572 -3771 994 175 96 13 chr20 32206266 32206534 -39947348 - MER31-int LTR ERV1 -621 5977 4002 * 1404 183 11 18 chr20 32206529 32206808 -39947074 - MER31-int LTR ERV1 -1113 3823 3547 2384 232 24 18 chr20 32206818 32207370 -39946512 + MER57-int LTR ERV1 3549 4103 -768 1072 197 127 84 chr20 32207407 32207619 -39946263 + MER57-int LTR ERV1 6636 6873 -664 2277 74 0 3 chr20 32207619 32207928 -39945954 - AluSc SINE Alu 0 308 1 1072 197 127 84 chr20 32207928 32208084 -39945798 + MER57-int LTR ERV1 6873 7021 -516 1527 163 18 15 chr20 32208084 32208395 -39945487 + MER61B LTR ERV1 1 396 -28 661 195 49 0 chr20 32208415 32208538 -39945344 + MER57-int LTR ERV1 7016 7144 -393 2063 189 22 93 chr20 32208538 32208921 -39944961 + LTR54 LTR ERV1 1 335 -175 2259 99 0 31 chr20 32208921 32209244 -39944638 - AluSq SINE Alu 0 313 1 2063 189 22 93 chr20 32209244 32209409 -39944473 + LTR54 LTR ERV1 335 510 0 1112 200 14 9 chr20 32209409 32209712 -39944170 - L1M1 LINE L1 -4161 3405 2868 1823 243 91 21 chr20 32209755 32210314 -39943568 - L1M1 LINE L1 -6469 1097 500 382 311 15 15 chr20 32210339 32210474 -39943408 - L1M3c LINE L1 -6005 136 2 21 57 0 0 chr20 32210523 32210558 -39943324 + AT_rich Low_complexity Low_complexity 1 35 0 831 161 0 0 chr20 32211075 32211255 -39942627 + (CATTC)n Satellite Satellite 1 180 0 876 157 0 5 chr20 32211268 32212052 -39941830 + (CATTC)n Satellite Satellite 1 779 0 1020 128 0 0 chr20 32212094 32212306 -39941576 + (CATTC)n Satellite Satellite 1 253 0 249 98 0 0 chr20 32212306 32212347 -39941535 + (CATTC)n Satellite Satellite 4 44 0 707 173 0 3 chr20 32212381 32212740 -39941142 + (CATTC)n Satellite Satellite 1 357 0 1035 147 1 0 chr20 32212754 32213498 -39940384 + (CATTC)n Satellite Satellite 1 744 0 225 83 83 0 chr20 32213505 32213541 -39940341 + HSATII Satellite Satellite 98 136 -34 798 153 0 0 chr20 32213549 32213726 -39940156 + (CATTC)n Satellite Satellite 3 179 0 778 143 0 13 chr20 32213759 32214061 -39939821 + (CATTC)n Satellite Satellite 1 297 0 816 156 0 0 chr20 32214080 32214260 -39939622 + (CATTC)n Satellite Satellite 1 180 0 312 164 0 0 chr20 32214281 32214348 -39939534 + (CATTC)n Satellite Satellite 2 68 0 1479 72 1 0 chr20 32214381 32215094 -39938788 + (CATTC)n Satellite Satellite 1 714 0 789 172 0 0 chr20 32215129 32215483 -39938399 + (CATTC)n Satellite Satellite 1 354 0 339 132 0 0 chr20 32215498 32215566 -39938316 + (CATTC)n Satellite Satellite 1 68 0 880 110 0 28 chr20 32215586 32215768 -39938114 + (CATTC)n Satellite Satellite 4 180 0 876 160 0 0 chr20 32215788 32216408 -39937474 + (CATTC)n Satellite Satellite 1 620 0 501 193 0 0 chr20 32216429 32216574 -39937308 + (CATTC)n Satellite Satellite 2 146 0 672 133 0 48 chr20 32216593 32216781 -39937101 + (CATTC)n Satellite Satellite 1 179 0 866 136 4 14 chr20 32216799 32217084 -39936798 + (CATTC)n Satellite Satellite 1 282 0 861 136 0 0 chr20 32217103 32217280 -39936602 + (CATTC)n Satellite Satellite 4 180 0 681 144 0 0 chr20 32217294 32217440 -39936442 + (CATTC)n Satellite Satellite 5 150 0 828 168 0 0 chr20 32217460 32217795 -39936087 + (CATTC)n Satellite Satellite 1 335 0 683 194 4 0 chr20 32217813 32218068 -39935814 + (CATTC)n Satellite Satellite 1 256 0 873 163 0 0 chr20 32218096 32218921 -39934961 + (CATTC)n Satellite Satellite 1 825 0 939 158 3 0 chr20 32218944 32219296 -39934586 + (CATTC)n Satellite Satellite 1 353 0 855 175 0 0 chr20 32219322 32219847 -39934035 + (CATTC)n Satellite Satellite 1 525 0 828 171 0 0 chr20 32219869 32220167 -39933715 + (CATTC)n Satellite Satellite 1 298 0 927 148 3 5 chr20 32220186 32220809 -39933073 + (CATTC)n Satellite Satellite 1 622 0 1155 161 3 3 chr20 32220820 32221489 -39932393 + (CATTC)n Satellite Satellite 1 669 0 699 174 0 0 chr20 32221505 32222019 -39931863 + (CATTC)n Satellite Satellite 1 514 0 1011 155 0 3 chr20 32222054 32222401 -39931481 + (CATTC)n Satellite Satellite 3 347 0 948 133 0 0 chr20 32222412 32222592 -39931290 + (CATTC)n Satellite Satellite 1 180 0 1230 162 0 7 chr20 32222612 32223990 -39929892 + (CATTC)n Satellite Satellite 1 1368 0 247 290 0 0 chr20 32223990 32224052 -39929830 + (CACTC)n Simple_repeat Simple_repeat 1 62 0 873 172 3 0 chr20 32224059 32224702 -39929180 + (CATTC)n Satellite Satellite 1 645 0 675 178 4 4 chr20 32224722 32225217 -39928665 + (CATTC)n Satellite Satellite 1 495 0 203 103 26 0 chr20 32225208 32225247 -39928635 + HSATII Satellite Satellite 21 60 -110 * 1233 147 4 3 chr20 32225265 32225975 -39927907 + (CATTC)n Satellite Satellite 1 711 0 748 144 12 0 chr20 32225991 32226164 -39927718 + (CATTC)n Satellite Satellite 1 175 0 887 122 6 0 chr20 32226191 32226363 -39927519 + (CATTC)n Satellite Satellite 3 175 0 978 122 0 0 chr20 32226382 32226562 -39927320 + (CATTC)n Satellite Satellite 1 180 0 828 144 0 0 chr20 32226584 32226871 -39927011 + (CATTC)n Satellite Satellite 1 287 0 932 167 2 3 chr20 32226917 32227968 -39925914 + (CATTC)n Satellite Satellite 1 1049 0 805 161 1 12 chr20 32228032 32228873 -39925009 + (CATTC)n Satellite Satellite 1 831 0 846 152 0 0 chr20 32228951 32229191 -39924691 + (CATTC)n Satellite Satellite 1 240 0 960 154 0 0 chr20 32229226 32229560 -39924322 + (CATTC)n Satellite Satellite 1 334 0 752 186 3 3 chr20 32229571 32229928 -39923954 + (CATTC)n Satellite Satellite 1 357 0 915 170 3 3 chr20 32229950 32230620 -39923262 + (CATTC)n Satellite Satellite 1 670 0 491 195 0 6 chr20 32230642 32230811 -39923071 + (CATTC)n Satellite Satellite 2 169 0 876 152 0 0 chr20 32230822 32231077 -39922805 + (CATTC)n Satellite Satellite 1 255 0 678 175 0 0 chr20 32231102 32231279 -39922603 + (CATTC)n Satellite Satellite 4 180 0 384 206 0 0 chr20 32231294 32231420 -39922462 + (CATTC)n Satellite Satellite 2 127 0 978 172 4 0 chr20 32231442 32231720 -39922162 + (CATTC)n Satellite Satellite 1 279 0 1032 155 0 1 chr20 32231739 32232471 -39921411 + (CATTC)n Satellite Satellite 1 731 0 312 212 0 0 chr20 32232523 32232655 -39921227 + (CATTC)n Satellite Satellite 3 134 0 454 207 3 6 chr20 32232682 32233018 -39920864 + (CATTC)n Satellite Satellite 1 334 0 819 167 0 0 chr20 32233041 32233411 -39920471 + (CATTC)n Satellite Satellite 1 370 0 978 166 2 2 chr20 32233436 32234098 -39919784 + (CATTC)n Satellite Satellite 1 662 0 700 158 6 6 chr20 32234139 32234316 -39919566 + (CATTC)n Satellite Satellite 4 180 0 794 131 0 27 chr20 32234333 32234516 -39919366 + (CATTC)n Satellite Satellite 3 180 0 348 206 0 0 chr20 32234533 32234659 -39919223 + (CATTC)n Satellite Satellite 3 128 0 859 128 6 6 chr20 32234686 32234865 -39919017 + (CATTC)n Satellite Satellite 1 179 0 788 162 3 0 chr20 32234912 32235211 -39918671 + (CATTC)n Satellite Satellite 1 300 0 870 135 0 0 chr20 32235222 32235400 -39918482 + (CATTC)n Satellite Satellite 3 180 0 770 171 2 0 chr20 32235430 32235908 -39917974 + (CATTC)n Satellite Satellite 1 479 0 812 147 0 27 chr20 32235949 32236133 -39917749 + (CATTC)n Satellite Satellite 1 179 0 699 174 0 0 chr20 32236190 32236368 -39917514 + (CATTC)n Satellite Satellite 3 180 0 870 140 0 0 chr20 32236394 32236573 -39917309 + (CATTC)n Satellite Satellite 2 180 0 828 151 0 0 chr20 32236608 32236787 -39917095 + (CATTC)n Satellite Satellite 1 179 0 744 164 0 0 chr20 32236841 32237018 -39916864 + (CATTC)n Satellite Satellite 4 180 0 789 159 0 0 chr20 32237031 32237361 -39916521 + (CATTC)n Satellite Satellite 1 330 0 729 168 0 0 chr20 32237379 32237558 -39916324 + (CATTC)n Satellite Satellite 2 180 0 936 144 4 7 chr20 32237573 32238550 -39915332 + (CATTC)n Satellite Satellite 1 974 0 825 139 0 0 chr20 32238566 32238739 -39915143 + (CATTC)n Satellite Satellite 3 175 0 1002 166 3 9 chr20 32238770 32239422 -39914460 + (CATTC)n Satellite Satellite 1 648 0 1163 121 2 6 chr20 32239438 32239929 -39913953 + (CATTC)n Satellite Satellite 1 488 0 609 190 0 0 chr20 32239960 32240139 -39913743 + (CATTC)n Satellite Satellite 2 180 0 468 214 0 0 chr20 32240180 32240358 -39913524 + (CATTC)n Satellite Satellite 2 179 0 1310 51 23 0 chr20 32240739 32240916 -39912966 - L1PA8A LINE L1 -229 5902 5722 318 152 98 11 chr20 32240917 32241009 -39912873 + L1 LINE L1 4217 4316 -1830 25 65 0 0 chr20 32242608 32242654 -39911228 + AT_rich Low_complexity Low_complexity 1 46 0 246 32 0 0 chr20 32243217 32243248 -39910634 + (TG)n Simple_repeat Simple_repeat 1 31 0 7841 183 7 0 chr20 32244156 32246656 -39907226 + L1PA15 LINE L1 3661 6159 -6 534 144 0 0 chr20 32246673 32246763 -39907119 - L1 LINE L1 -2585 3561 3472 642 139 15 0 chr20 32246766 32246877 -39907005 + MSTC LTR MaLR 1 116 -249 13845 157 70 34 chr20 32246877 32249577 -39904305 + L1MA1 LINE L1 27 2832 -4733 1691 193 0 27 chr20 32249577 32249872 -39904010 + AluJb SINE Alu 3 289 -23 13845 157 70 34 chr20 32249872 32249939 -39903943 + L1MA1 LINE L1 2832 2895 -4670 304 277 0 43 chr20 32249951 32250045 -39903837 - L1MC4 LINE L1 -1339 6703 6614 304 239 68 23 chr20 32249991 32250079 -39903803 + L1MC4 LINE L1 6614 6705 -1337 419 168 0 10 chr20 32250081 32250182 -39903700 + (TA)n Simple_repeat Simple_repeat 2 101 0 11603 156 44 21 chr20 32250195 32253839 -39900043 + L1MA1 LINE L1 3987 7717 -4 28 48 0 0 chr20 32253853 32253895 -39899987 + AT_rich Low_complexity Low_complexity 1 42 0 218 212 45 0 chr20 32253981 32254047 -39899835 + A-rich Low_complexity Low_complexity 2 70 0 234 363 60 12 chr20 32255137 32255305 -39898577 - L2 LINE L2 -883 2431 2256 984 118 0 0 chr20 32255492 32255627 -39898255 - AluSg/x SINE Alu -3 309 175 189 0 0 0 chr20 32256034 32256055 -39897827 + (A)n Simple_repeat Simple_repeat 1 21 0 241 340 60 26 chr20 32256063 32256331 -39897551 - L2 LINE L2 -1310 2004 1728 663 338 30 4 chr20 32257413 32257644 -39896238 + MIR SINE MIR 18 254 -8 309 375 86 7 chr20 32258279 32258477 -39895405 - MIR SINE MIR -50 212 3 30 0 0 0 chr20 32259340 32259370 -39894512 + AT_rich Low_complexity Low_complexity 1 30 0 273 344 49 8 chr20 32259683 32259805 -39894077 - MER5B DNA MER1_type -30 148 22 256 373 45 0 chr20 32260091 32260201 -39893681 - L2 LINE L2 0 3313 3199 335 305 0 17 chr20 32260479 32260597 -39893285 + GA-rich Low_complexity Low_complexity 5 120 0 1020 196 10 82 chr20 32260881 32261187 -39892695 - L1MA10 LINE L1 -4 6330 6047 1974 167 8 0 chr20 32261187 32261558 -39892324 + L1 LINE L1 4889 5262 -884 608 62 0 0 chr20 32262843 32262923 -39890959 + L1PA7 LINE L1 6075 6154 0 1691 156 12 21 chr20 32262920 32263253 -39890629 - L1MA7 LINE L1 -176 6115 5786 432 156 135 0 chr20 32263248 32263344 -39890538 + L1MA6 LINE L1 6094 6202 -98 * 2163 239 53 23 chr20 32263354 32264477 -39889405 - L1 LINE L1 -3726 3839 2688 4066 127 9 0 chr20 32264492 32265131 -39888751 - Tigger1 DNA MER2_type -906 1512 868 2491 43 0 0 chr20 32265446 32265750 -39888132 - L1PA5 LINE L1 -5 6149 5846 2324 96 0 10 chr20 32266858 32267171 -39886711 + AluSx SINE Alu 2 311 -1 953 273 104 11 chr20 32267671 32268445 -39885437 - L1ME3A LINE L1 -289 5864 5005 529 288 84 0 chr20 32268502 32268776 -39885106 - L1ME3A LINE L1 -1231 4898 4602 2532 50 0 28 chr20 32268899 32269217 -39884665 - AluSc SINE Alu 0 309 1 484 321 42 18 chr20 32269360 32269740 -39884142 - L1ME3A LINE L1 -2210 3919 3531 417 303 114 53 chr20 32269861 32270333 -39883549 - L1ME3A LINE L1 -2594 3535 3035 398 260 195 5 chr20 32270347 32270547 -39883335 - L1ME4a LINE L1 -11 6110 5873 255 322 56 26 chr20 32270864 32271134 -39882748 - L1MC4 LINE L1 -571 7471 7194 762 266 25 106 chr20 32271177 32271707 -39882175 - L1MC4 LINE L1 -852 7109 6626 555 269 23 23 chr20 32272090 32272350 -39881532 - L1ME3A LINE L1 -3581 2548 2289 1052 276 63 52 chr20 32272512 32273220 -39880662 - L1MEd LINE L1 -4520 1609 910 1791 175 3 3 chr20 32273220 32273517 -39880365 - AluJb SINE Alu -15 297 1 1052 276 63 52 chr20 32273517 32273586 -39880296 - L1MEd LINE L1 -5219 910 843 1963 129 6 38 chr20 32273586 32273903 -39879979 - AluSx SINE Alu -5 307 1 1052 276 63 52 chr20 32273903 32274267 -39879615 - L1MEd LINE L1 -5286 843 455 21 71 0 0 chr20 32275417 32275459 -39878423 + AT_rich Low_complexity Low_complexity 1 42 0 25 0 0 0 chr20 32275741 32275766 -39878116 + AT_rich Low_complexity Low_complexity 1 25 0 313 288 23 5 chr20 32275770 32275972 -39877910 - L1ME LINE L1 -318 5844 5125 250 351 9 18 chr20 32276977 32277088 -39876794 + MIR SINE MIR 26 135 -73 22 0 0 0 chr20 32278076 32278098 -39875784 + AT_rich Low_complexity Low_complexity 1 22 0 964 211 330 18 chr20 32278099 32278645 -39875237 - LTR50 LTR ERVL -63 732 17 1961 218 21 64 chr20 32279238 32279976 -39873906 + L1M4c LINE L1 2329 3027 -3355 2527 47 3 0 chr20 32279989 32280288 -39873594 + AluY SINE Alu 1 300 -11 4030 178 50 3 chr20 32280567 32281415 -39872467 + L1 LINE L1 4268 5158 -1224 1743 133 74 20 chr20 32281415 32281766 -39872116 + L1MA9 LINE L1 5942 6312 0 4030 178 50 3 chr20 32281766 32281780 -39872102 + L1 LINE L1 5158 5170 -1212 185 309 85 32 chr20 32282063 32282157 -39871725 - MIR SINE MIR -70 138 40 24 85 0 0 chr20 32282216 32282275 -39871607 + AT_rich Low_complexity Low_complexity 1 59 0 2233 114 0 0 chr20 32283051 32283349 -39870533 - AluSq SINE Alu -15 298 1 410 226 84 71 chr20 32283895 32284134 -39869748 + LTR16A LTR ERVL 18 324 -126 1816 82 0 0 chr20 32284134 32284353 -39869529 - AluSc SINE Alu -17 292 74 410 226 84 71 chr20 32284353 32284475 -39869407 + LTR16A LTR ERVL 324 443 -7 1322 268 17 0 chr20 32284533 32284828 -39869054 + AluJo SINE Alu 1 300 -12 205 28 0 56 chr20 32284828 32284864 -39869018 + (GGAGAA)n Simple_repeat Simple_repeat 1 34 0 203 133 0 0 chr20 32284869 32284899 -39868983 + (AGGGGG)n Simple_repeat Simple_repeat 3 32 0 828 139 26 11 chr20 32284900 32285255 -39868627 + GA-rich Low_complexity Low_complexity 1 360 0 42301 36 2 2 chr20 32286587 32292734 -39861148 + L1PA3 LINE L1 7 6152 -3 2112 147 0 0 chr20 32294507 32294819 -39859063 + AluSx SINE Alu 1 312 0 2015 81 77 0 chr20 32296051 32296323 -39857559 - AluY SINE Alu -17 294 2 2722 3 0 0 chr20 32297287 32297581 -39856301 + AluY SINE Alu 1 294 -17 38 0 0 0 chr20 32299505 32299543 -39854339 + AT_rich Low_complexity Low_complexity 1 38 0 22 0 0 0 chr20 32300041 32300063 -39853819 + AT_rich Low_complexity Low_complexity 1 22 0 1103 98 5 43 chr20 32300679 32300863 -39853019 + LTR8 LTR ERV1 411 587 -104 2243 119 3 6 chr20 32301043 32301354 -39852528 + AluSq SINE Alu 2 311 -2 10344 155 24 16 chr20 32301530 32303350 -39850532 + L1M1 LINE L1 16 1850 -5715 1669 224 70 6 chr20 32303345 32303828 -39850054 + L1MC3 LINE L1 5872 6385 -1400 * 1157 169 5 0 chr20 32303821 32304016 -39849866 + L1MC3 LINE L1 6627 6822 -963 * 194 380 0 22 chr20 32304164 32304256 -39849626 + L2 LINE L2 2885 2974 -340 938 196 108 31 chr20 32304267 32304527 -39849355 + MLT1F LTR MaLR 259 538 -4 391 231 0 13 chr20 32305130 32305208 -39848674 + MIR SINE MIR 3 79 -183 3775 13 25 7 chr20 32305775 32306224 -39847658 + L1PA2 LINE L1 5696 6152 -3 468 286 48 41 chr20 32306378 32306647 -39847235 + HAL1 LINE L1 1256 1526 -981 674 167 0 0 chr20 32306661 32306763 -39847119 + AluJ/FLAM SINE Alu 1 102 -210 273 288 0 12 chr20 32307455 32307535 -39846347 + MIR3 SINE MIR 96 174 -34 28 48 0 0 chr20 32307628 32307670 -39846212 + AT_rich Low_complexity Low_complexity 1 42 0 355 284 72 64 chr20 32308773 32309058 -39844824 - L1MC4a LINE L1 -1826 5982 5701 351 0 0 0 chr20 32309058 32309097 -39844785 + (TA)n Simple_repeat Simple_repeat 2 40 0 355 284 72 64 chr20 32309097 32309110 -39844772 - L1MC4a LINE L1 -2107 5701 5690 2447 78 0 0 chr20 32309110 32309405 -39844477 - AluY SINE Alu -16 295 1 355 284 72 64 chr20 32309405 32309496 -39844386 - L1MC4a LINE L1 -2118 5690 5589 266 296 69 13 chr20 32309632 32309791 -39844091 + HAL1 LINE L1 1494 1661 -846 469 116 0 0 chr20 32309841 32309910 -39843972 + Alu SINE Alu 235 303 -9 529 307 74 70 chr20 32309910 32310009 -39843873 + L1M4 LINE L1 2324 2421 -3725 1452 190 39 28 chr20 32310009 32310293 -39843589 + AluJb SINE Alu 1 287 -25 529 307 74 70 chr20 32310293 32310734 -39843148 + L1M4 LINE L1 2421 2866 -3280 549 146 11 0 chr20 32310741 32310830 -39843052 + 5S rRNA rRNA 1 90 -31 364 275 44 25 chr20 32310872 32311032 -39842850 - MLT1H LTR MaLR -386 163 1 261 244 204 47 chr20 32311032 32311204 -39842678 + L1ME3A LINE L1 5956 6154 -16 5923 145 19 9 chr20 32311817 32313468 -39840414 + L1MA6 LINE L1 4640 6300 0 810 202 24 12 chr20 32313541 32313709 -39840173 + MER5A DNA MER1_type 17 186 -3 741 172 18 25 chr20 32313793 32313956 -39839926 - L1MA10 LINE L1 0 6334 6173 2197 112 26 0 chr20 32314079 32314383 -39839499 + AluSx SINE Alu 1 312 0 2255 49 4 4 chr20 32315253 32315520 -39838362 + AluY SINE Alu 2 268 -43 222 37 0 0 chr20 32315526 32315553 -39838329 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 23 0 0 0 chr20 32315760 32315783 -39838099 + AT_rich Low_complexity Low_complexity 1 23 0 266 143 0 0 chr20 32315832 32315874 -39838008 + L1ME1 LINE L1 3812 3853 -2293 3767 89 31 22 chr20 32315874 32316457 -39837425 + L1MA8 LINE L1 5702 6289 -2 331 194 125 0 chr20 32316499 32316571 -39837311 + AluJb SINE Alu 43 123 -179 2713 223 64 33 chr20 32316585 32316952 -39836930 + L1ME1 LINE L1 3840 4194 -1952 2023 130 0 3 chr20 32316952 32317266 -39836616 + AluY SINE Alu 1 311 0 2713 223 64 33 chr20 32317266 32317724 -39836158 + L1ME1 LINE L1 4194 4691 -1455 227 160 0 120 chr20 32317725 32317779 -39836103 + L1ME1 LINE L1 5380 5424 -2361 2274 110 3 0 chr20 32317779 32318079 -39835803 + AluSx SINE Alu 1 301 -11 227 160 0 120 chr20 32318079 32318099 -39835783 + L1ME1 LINE L1 5424 5445 -2340 2096 99 55 39 chr20 32318099 32318462 -39835420 - THE1C LTR MaLR 0 375 7 2783 97 5 10 chr20 32318466 32318849 -39835033 - THE1C-int LTR MaLR -4 1576 1196 2562 53 0 3 chr20 32318850 32319151 -39834731 + AluY SINE Alu 1 300 -11 2395 194 59 83 chr20 32319177 32319920 -39833962 + L1ME1 LINE L1 5437 6161 -5 340 95 10 0 chr20 32319932 32319990 -39833892 + AluSx SINE Alu 1 42 -266 1879 127 0 8 chr20 32320104 32320372 -39833510 + AluSx SINE Alu 41 306 -6 180 0 0 0 chr20 32320574 32320594 -39833288 + (T)n Simple_repeat Simple_repeat 1 20 0 182 351 32 0 chr20 32320867 32320961 -39832921 - L3 LINE CR1 -100 1477 1381 1876 148 13 26 chr20 32320986 32321297 -39832585 + AluJo SINE Alu 1 307 -5 1309 98 16 22 chr20 32321702 32321885 -39831997 - AluSg/x SINE Alu -13 299 118 278 304 172 49 chr20 32322029 32322233 -39831649 - L2 LINE L2 -2 3270 3042 2441 95 0 3 chr20 32323257 32323561 -39830321 - AluSx SINE Alu -9 303 1 227 279 140 39 chr20 32323573 32323802 -39830080 - L1MC/D LINE L1 -1925 5883 5632 1843 136 0 0 chr20 32324617 32324882 -39829000 - AluSx SINE Alu -7 305 41 422 305 159 11 chr20 32324944 32325256 -39828626 + L2 LINE L2 2782 3137 -176 1331 120 11 0 chr20 32325333 32325524 -39828358 - AluSg/x SINE Alu -1 309 117 3683 84 4 2 chr20 32325563 32326048 -39827834 - L1PB3 LINE L1 0 6154 5669 2337 84 3 0 chr20 32326141 32326427 -39827455 + AluSc SINE Alu 1 287 -22 905 293 79 8 chr20 32327786 32328304 -39825578 - HERVL LTR ERVL -1504 3981 3420 470 284 93 93 chr20 32328311 32329009 -39824873 - L1MEd LINE L1 -5270 849 149 2384 104 0 0 chr20 32329009 32329317 -39824565 - AluSg SINE Alu 0 310 3 470 284 93 93 chr20 32329317 32329423 -39824459 - L1MEd LINE L1 -5969 150 45 188 273 91 37 chr20 32329999 32330186 -39823696 - L2 LINE L2 -1216 2098 1902 214 287 52 52 chr20 32330337 32330473 -39823409 - L2 LINE L2 -1406 1908 1773 186 343 40 0 chr20 32330674 32330773 -39823109 - L3 LINE CR1 -153 1424 1322 2660 236 77 88 chr20 32331431 32331510 -39822372 + L1MDa LINE L1 18 96 -6444 219 69 0 0 chr20 32331510 32331539 -39822343 + (TG)n Simple_repeat Simple_repeat 2 30 0 2660 236 77 88 chr20 32331539 32332421 -39821461 + L1MDa LINE L1 96 1130 -5410 616 226 67 5 chr20 32332423 32332612 -39821270 - L1MD2 LINE L1 -322 5829 5660 2052 100 4 0 chr20 32332813 32333074 -39820808 - AluSx SINE Alu -15 297 36 1177 123 31 0 chr20 32333177 32333372 -39820510 - L1MD2 LINE L1 -873 5486 5286 1121 138 6 0 chr20 32333373 32333532 -39820350 - AluSc SINE Alu -18 291 132 2344 92 0 7 chr20 32333532 32333835 -39820047 - AluY SINE Alu -9 302 2 3809 214 32 63 chr20 32333838 32334146 -39819736 - L1MD2 LINE L1 -850 5296 4980 1761 169 7 7 chr20 32334146 32334436 -39819446 - AluJo SINE Alu -21 291 2 3809 214 32 63 chr20 32334436 32335331 -39818551 - L1MD2 LINE L1 -1166 4980 4130 1698 180 154 66 chr20 32335332 32335403 -39818479 + L1MD2 LINE L1 5803 5866 -493 2033 124 10 0 chr20 32335403 32335693 -39818189 + AluJb SINE Alu 1 293 -19 1698 180 154 66 chr20 32335693 32336120 -39817762 + L1MD2 LINE L1 5866 6345 -14 499 277 60 24 chr20 32336148 32336397 -39817485 + MIR SINE MIR 5 262 0 199 294 35 35 chr20 32336597 32336682 -39817200 - L2 LINE L2 -2 3270 3186 2316 124 16 53 chr20 32336974 32337135 -39816747 + THE1B LTR MaLR 1 166 -198 2057 121 38 3 chr20 32337135 32337425 -39816457 + AluSx SINE Alu 3 302 -10 2194 72 3 31 chr20 32337425 32337743 -39816139 + AluY SINE Alu 1 310 0 2316 124 16 53 chr20 32337743 32337957 -39815925 + THE1B LTR MaLR 164 364 0 1658 138 4 0 chr20 32338045 32338314 -39815568 + L1MA3 LINE L1 6036 6305 0 232 178 0 0 chr20 32339219 32339264 -39814618 + A-rich Low_complexity Low_complexity 1 45 0 412 213 148 0 chr20 32339268 32339390 -39814492 + MIR SINE MIR 52 191 -71 1925 152 0 10 chr20 32339456 32339753 -39814129 + AluJb SINE Alu 1 294 -18 3264 113 23 49 chr20 32340284 32340673 -39813209 + L1MA5 LINE L1 5738 6109 -191 2304 75 30 7 chr20 32340673 32340978 -39812904 - AluSx SINE Alu 0 312 1 3264 113 23 49 chr20 32340978 32341164 -39812718 + L1MA5 LINE L1 6109 6298 -2 1073 250 35 41 chr20 32341208 32341767 -39812115 - MER115 DNA AcHobo 0 693 73 392 244 82 0 chr20 32342194 32342329 -39811553 - MIR SINE MIR -55 207 62 239 234 39 13 chr20 32342330 32342407 -39811475 + (TGAA)n Simple_repeat Simple_repeat 3 81 0 270 206 29 15 chr20 32343661 32343688 -39810194 + (CCCCAG)n Simple_repeat Simple_repeat 1 26 -168 218 31 0 31 chr20 32343688 32343720 -39810162 + (CTAAT)n Simple_repeat Simple_repeat 1 31 0 270 206 29 15 chr20 32343720 32343853 -39810029 + (CCCCAG)n Simple_repeat Simple_repeat 26 194 0 22 94 0 0 chr20 32344897 32344961 -39808921 + AT_rich Low_complexity Low_complexity 1 64 0 2162 103 40 13 chr20 32344963 32345264 -39808618 + AluSg SINE Alu 1 309 -1 451 323 52 10 chr20 32345362 32345653 -39808229 + L2 LINE L2 2900 3202 -111 1167 252 58 60 chr20 32345711 32346011 -39807871 - MLT1J LTR MaLR -20 470 193 1861 130 7 46 chr20 32346011 32346318 -39807564 + AluSx SINE Alu 1 295 -17 1167 252 58 60 chr20 32346318 32346511 -39807371 - MLT1J LTR MaLR -297 193 1 30 0 0 0 chr20 32346517 32346547 -39807335 + AT_rich Low_complexity Low_complexity 1 30 0 980 173 40 35 chr20 32346653 32346855 -39807027 + AluJo SINE Alu 22 224 -88 552 303 98 52 chr20 32346871 32347238 -39806644 + LTR67 LTR ERVL 114 497 -60 375 226 219 0 chr20 32347260 32347406 -39806476 + MIR SINE MIR 85 262 0 626 180 63 79 chr20 32348057 32348088 -39805794 + MIR SINE MIR 77 107 -155 1980 153 3 3 chr20 32348088 32348383 -39805499 + AluSx SINE Alu 1 295 -17 626 180 63 79 chr20 32348383 32348540 -39805342 + MIR SINE MIR 107 262 0 266 290 19 25 chr20 32348754 32348916 -39804966 + (TATATG)n Simple_repeat Simple_repeat 4 164 0 351 44 0 0 chr20 32350166 32350211 -39803671 + (TG)n Simple_repeat Simple_repeat 1 45 0 2431 100 0 3 chr20 32350226 32350537 -39803345 - AluSq SINE Alu -3 310 1 2175 48 4 11 chr20 32350877 32351149 -39802733 - L1PA8 LINE L1 -3 6169 5900 225 0 0 0 chr20 32351254 32351279 -39802603 + (CA)n Simple_repeat Simple_repeat 1 25 0 2217 109 0 7 chr20 32351545 32351847 -39802035 - AluSx SINE Alu -12 300 1 1884 148 0 21 chr20 32351917 32352107 -39801775 - AluSx SINE Alu 0 323 140 2455 82 16 0 chr20 32352107 32352411 -39801471 - AluSg SINE Alu -1 309 1 1884 148 0 21 chr20 32352411 32352544 -39801338 - AluSx SINE Alu -183 140 6 23 0 0 0 chr20 32352644 32352667 -39801215 + AT_rich Low_complexity Low_complexity 1 23 0 296 288 91 23 chr20 32352792 32352924 -39800958 - L2 LINE L2 -2 3311 3171 465 200 0 0 chr20 32353040 32353125 -39800757 + MER96 DNA MER1_type? 91 175 0 270 273 249 36 chr20 32353314 32353651 -39800231 + LTR67 LTR ERVL 99 507 -50 2244 122 0 3 chr20 32354054 32354365 -39799517 - AluSx SINE Alu -2 310 1 2293 293 136 46 chr20 32354838 32356807 -39797075 - L2 LINE L2 0 3313 1116 1691 163 13 43 chr20 32356807 32357108 -39796774 + AluJo SINE Alu 1 292 -20 2293 293 136 46 chr20 32357108 32357283 -39796599 - L2 LINE L2 -2197 1116 958 581 317 25 9 chr20 32357439 32357667 -39796215 - MIR SINE MIR -11 251 21 1027 185 35 10 chr20 32358260 32358460 -39795422 - MER3 DNA MER1_type -4 205 1 294 29 0 0 chr20 32358615 32358650 -39795232 + (CA)n Simple_repeat Simple_repeat 2 36 0 980 187 12 0 chr20 32360665 32360836 -39793046 - FRAM SINE Alu -4 172 1 708 290 64 40 chr20 32360855 32360866 -39793016 + MLT1H LTR MaLR 3 12 -537 2014 95 0 11 chr20 32360866 32361139 -39792743 + AluY SINE Alu 30 299 -12 708 290 64 40 chr20 32361139 32361424 -39792458 + MLT1H LTR MaLR 12 306 -243 394 192 0 13 chr20 32361499 32361577 -39792305 + MLT1H LTR MaLR 473 549 0 2334 107 0 3 chr20 32361642 32361950 -39791932 - AluSx SINE Alu -5 307 1 1479 186 16 29 chr20 32362033 32362345 -39791537 + AluJo SINE Alu 1 308 -4 1057 171 92 13 chr20 32362385 32362613 -39791269 - MER58B DNA MER1_type -13 328 83 2222 125 0 0 chr20 32362615 32362910 -39790972 + AluSq SINE Alu 1 295 -18 414 171 0 95 chr20 32362914 32363019 -39790863 + FLAM_C SINE Alu 47 141 -2 1963 182 126 51 chr20 32363040 32363330 -39790552 + L1ME1 LINE L1 5552 5819 -515 2297 101 0 19 chr20 32363330 32363638 -39790244 + AluSq SINE Alu 1 302 -11 1963 182 126 51 chr20 32363638 32363936 -39789946 + L1ME1 LINE L1 5819 6334 0 2042 140 4 3 chr20 32364013 32364348 -39789534 + L1PA16 LINE L1 5775 6112 -56 330 26 0 0 chr20 32364695 32364734 -39789148 + (GA)n Simple_repeat Simple_repeat 1 39 0 862 277 11 9 chr20 32366213 32366474 -39787408 + MIR SINE MIR 3 262 0 1042 274 40 37 chr20 32367291 32367667 -39786215 - MLT1I LTR MaLR -4 405 29 762 133 23 0 chr20 32367669 32367797 -39786085 + L1MB1 LINE L1 5477 5607 -561 2165 130 10 0 chr20 32367797 32368105 -39785777 + AluSp SINE Alu 1 311 -2 349 71 48 48 chr20 32368108 32368192 -39785690 + GA-rich Low_complexity Low_complexity 4 87 0 2897 164 18 36 chr20 32368196 32368640 -39785242 + L1MB1 LINE L1 5616 6049 -119 1914 118 3 64 chr20 32368640 32368954 -39784928 + AluJo SINE Alu 1 295 -17 2897 164 18 36 chr20 32368954 32369071 -39784811 + L1MB1 LINE L1 6049 6167 -1 2207 114 0 0 chr20 32369119 32369416 -39784466 - AluSx SINE Alu -10 302 6 21 0 0 0 chr20 32369513 32369534 -39784348 + AT_rich Low_complexity Low_complexity 1 21 0 207 0 0 0 chr20 32369926 32369949 -39783933 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2182 117 0 0 chr20 32369951 32370232 -39783650 - AluSx SINE Alu -31 281 1 684 326 92 6 chr20 32370395 32370742 -39783140 - L3 LINE CR1 -11 1566 1190 2108 142 3 0 chr20 32370935 32371238 -39782644 + AluSx SINE Alu 1 304 -8 1057 210 50 86 chr20 32371247 32371552 -39782330 + HAL1 LINE L1 1092 1407 -1100 2326 111 0 0 chr20 32371552 32371850 -39782032 + AluSq SINE Alu 1 298 -15 2929 6 0 0 chr20 32371850 32372161 -39781721 + AluYa5 SINE Alu 1 311 0 1057 210 50 86 chr20 32372161 32372296 -39781586 + HAL1 LINE L1 1405 1517 -990 1439 182 141 23 chr20 32372303 32372650 -39781232 + MER66A LTR ERV1 27 414 -64 959 272 160 13 chr20 32372671 32373064 -39780818 + HAL1 LINE L1 1514 1964 -543 553 190 37 163 chr20 32373071 32373366 -39780516 + HAL1 LINE L1 2246 2503 -4 1491 164 45 42 chr20 32373465 32373777 -39780105 + THE1C LTR MaLR 63 375 0 2597 164 9 2 chr20 32373777 32374222 -39779660 + L1MA9 LINE L1 5639 6086 -226 1286 152 56 128 chr20 32374233 32374607 -39779275 - MLT1A1 LTR MaLR -12 353 7 1482 111 12 25 chr20 32374607 32374850 -39779032 + L1MA9 LINE L1 6073 6312 0 1648 171 58 0 chr20 32374899 32375192 -39778690 + AluJo SINE Alu 3 312 0 1413 235 41 78 chr20 32376157 32376812 -39777070 + L1MC5 LINE L1 6572 7146 -815 338 293 20 33 chr20 32376812 32376962 -39776920 + L2 LINE L2 2966 3113 -200 338 238 172 16 chr20 32376958 32377008 -39776874 + L2 LINE L2 3173 3214 -99 195 100 0 0 chr20 32377008 32377038 -39776844 + (TTGG)n Simple_repeat Simple_repeat 2 31 0 338 238 172 16 chr20 32377038 32377109 -39776773 + L2 LINE L2 3214 3313 0 204 330 36 18 chr20 32377435 32377547 -39776335 - MIR SINE MIR -110 152 39 284 277 43 35 chr20 32378020 32378161 -39775721 + L2 LINE L2 2677 2818 -496 442 275 58 0 chr20 32378400 32378538 -39775344 + MIR3 SINE MIR 59 204 -4 9561 22 0 249 chr20 32380138 32381983 -39771899 + SVA Other Other 1 1386 0 28 79 0 0 chr20 32382441 32382504 -39771378 + AT_rich Low_complexity Low_complexity 1 63 0 1979 169 47 38 chr20 32382518 32382761 -39771121 - MLT1C LTR MaLR -36 431 181 2314 119 0 0 chr20 32382761 32383071 -39770811 - AluSx SINE Alu -2 310 1 1979 169 47 38 chr20 32383071 32383254 -39770628 - MLT1C LTR MaLR -286 181 1 451 181 11 0 chr20 32383268 32383362 -39770520 - L1M LINE L1 -2396 5412 5318 1089 235 50 62 chr20 32383369 32383871 -39770011 - HAL1 LINE L1 -1220 1287 792 1730 270 102 63 chr20 32383880 32383948 -39769934 - HAL1 LINE L1 -1596 911 847 1820 150 39 7 chr20 32383948 32384261 -39769621 - AluSx SINE Alu 0 312 1 1730 270 102 63 chr20 32384261 32385069 -39768813 - HAL1 LINE L1 -1660 847 1 2289 87 0 10 chr20 32385128 32385417 -39768465 + AluSx SINE Alu 1 286 -26 194 0 0 37 chr20 32385417 32385444 -39768438 + (TTAAA)n Simple_repeat Simple_repeat 2 27 0 591 320 54 0 chr20 32385485 32385744 -39768138 - L1M4 LINE L1 -2275 3871 3599 23 0 0 0 chr20 32385880 32385903 -39767979 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr20 32386061 32386089 -39767793 + AT_rich Low_complexity Low_complexity 1 28 0 766 318 0 5 chr20 32386137 32386360 -39767522 + L1MEc LINE L1 36 257 -6139 1296 220 104 64 chr20 32386755 32387123 -39766759 + MLT1E LTR MaLR 1 388 -205 2600 58 3 0 chr20 32387123 32387432 -39766450 + AluY SINE Alu 1 310 -1 1296 220 104 64 chr20 32387432 32387468 -39766414 + MLT1E LTR MaLR 388 421 -172 2222 87 4 0 chr20 32387957 32388234 -39765648 + AluSp SINE Alu 1 278 -35 234 0 0 0 chr20 32388238 32388264 -39765618 + (TAAA)n Simple_repeat Simple_repeat 1 26 0 2103 98 11 11 chr20 32388345 32388631 -39765251 + AluSx SINE Alu 6 291 -21 365 325 71 35 chr20 32389043 32389240 -39764642 - MLT1J LTR MaLR -177 334 131 371 266 58 36 chr20 32389243 32389382 -39764500 + L2 LINE L2 2184 2325 -989 1211 224 133 85 chr20 32389386 32389415 -39764467 + MLT1G LTR MaLR 1 27 -563 2179 118 3 0 chr20 32389415 32389711 -39764171 + AluSx SINE Alu 1 297 -15 1211 224 133 85 chr20 32389711 32390079 -39763803 + MLT1G LTR MaLR 27 452 -138 363 302 74 30 chr20 32390167 32390369 -39763513 - MIR SINE MIR -37 225 15 731 295 24 8 chr20 32390428 32390679 -39763203 - L2 LINE L2 -255 3058 2804 1933 117 3 54 chr20 32390789 32391087 -39762795 + AluSx SINE Alu 6 288 -24 36 0 0 0 chr20 32391087 32391123 -39762759 + AT_rich Low_complexity Low_complexity 1 36 0 354 327 0 9 chr20 32391173 32391280 -39762602 - MLT1K LTR MaLR -465 123 18 292 259 76 118 chr20 32391295 32391466 -39762416 - L1ME LINE L1 -479 5642 5465 1852 121 0 71 chr20 32391466 32391597 -39762285 + AluSx SINE Alu 7 107 -205 2321 112 0 0 chr20 32391597 32391900 -39761982 - AluSx SINE Alu -9 303 1 1852 121 0 71 chr20 32391900 32392065 -39761817 + AluSx SINE Alu 107 282 -30 189 0 0 0 chr20 32392071 32392092 -39761790 + (TA)n Simple_repeat Simple_repeat 2 22 0 292 259 76 118 chr20 32392092 32392175 -39761707 - L1ME LINE L1 -661 5460 5392 276 284 73 46 chr20 32392657 32392766 -39761116 - MIR3 SINE MIR -47 161 50 237 146 0 18 chr20 32392882 32392937 -39760945 + Alu SINE Alu 249 302 0 198 0 0 0 chr20 32393189 32393211 -39760671 + (TTG)n Simple_repeat Simple_repeat 2 23 0 388 250 56 56 chr20 32393273 32393342 -39760540 - LTR50 LTR ERVL -151 644 576 2241 99 17 0 chr20 32393342 32393635 -39760247 - AluSx SINE Alu -14 298 1 388 250 56 56 chr20 32393635 32393709 -39760173 - LTR50 LTR ERVL -218 577 501 385 265 118 70 chr20 32394695 32395050 -39758832 - L2 LINE L2 -35 3237 2866 190 358 37 0 chr20 32395351 32395460 -39758422 + MIR SINE MIR 39 151 -111 690 285 76 50 chr20 32395897 32396140 -39757742 - L2 LINE L2 -5 3308 3050 2013 135 3 26 chr20 32396140 32396451 -39757431 - AluSx SINE Alu -8 304 1 690 285 76 50 chr20 32396451 32396589 -39757293 - L2 LINE L2 -263 3050 2917 206 304 88 20 chr20 32397899 32398001 -39755881 + L2 LINE L2 3110 3218 -54 351 266 60 49 chr20 32398268 32398452 -39755430 - L1ME3A LINE L1 -43 6127 5942 1684 231 34 92 chr20 32398515 32399083 -39754799 - L1MC5 LINE L1 -431 7530 7015 2280 103 3 3 chr20 32399083 32399384 -39754498 - AluSx SINE Alu -11 301 1 1684 231 34 92 chr20 32399384 32399573 -39754309 - L1MC5 LINE L1 -946 7015 6817 1606 237 37 51 chr20 32399587 32400077 -39753805 - LTR65 LTR ERV1 -20 649 167 334 233 0 35 chr20 32400105 32400191 -39753691 - L1MC5 LINE L1 -1120 6841 6759 * 785 214 59 32 chr20 32400190 32400410 -39753472 - L1MEc LINE L1 -4329 2067 1842 743 111 0 0 chr20 32400412 32400520 -39753362 + AluY SINE Alu 204 311 0 2479 74 7 0 chr20 32400524 32400833 -39753049 + AluSp SINE Alu 1 311 -2 2910 266 55 44 chr20 32400833 32401160 -39752722 - L1MEc LINE L1 -4546 1850 1528 1908 139 34 7 chr20 32401160 32401324 -39752558 - AluJb SINE Alu -10 302 125 2616 59 0 0 chr20 32401324 32401629 -39752253 - AluY SINE Alu -6 305 1 1908 139 34 7 chr20 32401629 32401758 -39752124 - AluJb SINE Alu -187 125 1 2910 266 55 44 chr20 32401758 32402259 -39751623 - L1MEc LINE L1 -4868 1528 1034 2272 90 0 51 chr20 32402259 32402571 -39751311 - AluSp SINE Alu -17 296 1 2910 266 55 44 chr20 32402571 32403136 -39750746 - L1MEc LINE L1 -5362 1034 442 903 181 12 12 chr20 32403165 32403336 -39750546 + AluSg/x SINE Alu 135 305 -5 1720 232 40 34 chr20 32403820 32403898 -39749984 + Charlie1 DNA MER1_type 24 100 -2661 1948 70 0 74 chr20 32403898 32404069 -39749813 - AluY SINE Alu -9 302 159 414 0 0 0 chr20 32404069 32404115 -39749767 + (TA)n Simple_repeat Simple_repeat 2 47 0 1948 70 0 74 chr20 32404115 32404228 -39749654 - AluY SINE Alu -152 159 39 1720 232 40 34 chr20 32404228 32404593 -39749289 + Charlie1 DNA MER1_type 100 470 -2291 664 153 127 0 chr20 32404596 32404714 -39749168 - AluJo SINE Alu -175 137 5 543 261 42 61 chr20 32404753 32404941 -39748941 + L1MCc LINE L1 1226 1407 -5016 2497 120 57 47 chr20 32404941 32405284 -39748598 + MSTA LTR MaLR 1 350 -78 2283 105 0 3 chr20 32405284 32405580 -39748302 - AluSx SINE Alu -17 295 1 2497 120 57 47 chr20 32405580 32405660 -39748222 + MSTA LTR MaLR 350 428 0 543 261 42 61 chr20 32405660 32405781 -39748101 + L1MCc LINE L1 1407 1529 -4894 341 209 2 20 chr20 32405788 32405877 -39748005 - MLT1H LTR MaLR 0 567 462 265 213 0 0 chr20 32406002 32406049 -39747833 - AluY SINE Alu -252 47 1 298 215 13 63 chr20 32406230 32406309 -39747573 - MLT1F LTR MaLR -439 103 29 1116 150 0 17 chr20 32406385 32406558 -39747324 + FAM SINE Alu 1 170 -5 487 265 42 32 chr20 32406561 32406750 -39747132 + L1MCc LINE L1 1760 1950 -4981 736 186 0 0 chr20 32406758 32406876 -39747006 + AluJo/FLAM SINE Alu 1 118 -184 654 175 75 8 chr20 32406876 32406996 -39746886 - AluJo/FLAM SINE Alu -170 132 5 426 200 29 102 chr20 32407018 32407163 -39746719 + L1MCc LINE L1 1981 2108 -5014 2160 112 10 3 chr20 32407163 32407468 -39746414 + AluSx SINE Alu 2 308 -4 426 200 29 102 chr20 32407468 32407527 -39746355 + L1MCc LINE L1 2108 2170 -4952 1010 63 0 0 chr20 32407530 32407657 -39746225 + AluY SINE Alu 172 298 -13 403 280 16 11 chr20 32407666 32407855 -39746027 + L1M4 LINE L1 4409 4598 -1548 2284 66 0 87 chr20 32408378 32408710 -39745172 - AluY SINE Alu -8 303 1 1727 174 3 11 chr20 32408859 32409141 -39744741 - AluJb SINE Alu -22 290 11 669 224 20 0 chr20 32409146 32409298 -39744584 - L1MA10 LINE L1 -10 6324 6170 2162 96 43 10 chr20 32409315 32409618 -39744264 - AluSq SINE Alu 0 313 1 880 288 30 43 chr20 32409623 32409898 -39743984 + L2 LINE L2 2820 3090 -223 2572 52 0 3 chr20 32409898 32410203 -39743679 + AluY SINE Alu 1 304 -7 880 288 30 43 chr20 32410203 32410299 -39743583 + L2 LINE L2 3090 3186 -127 180 182 0 0 chr20 32410400 32410444 -39743438 + (TA)n Simple_repeat Simple_repeat 2 45 0 326 230 27 0 chr20 32410529 32410603 -39743279 + LTR33A LTR ERVL 448 523 0 231 206 59 15 chr20 32410687 32410755 -39743127 - L2 LINE L2 0 3272 3202 243 0 0 0 chr20 32410871 32410898 -39742984 + (TCCCC)n Simple_repeat Simple_repeat 2 28 0 390 250 57 57 chr20 32410899 32411039 -39742843 - LTR50 LTR ERVL -628 167 28 1018 155 0 7 chr20 32411205 32411360 -39742522 - AluJo SINE Alu -81 231 78 1834 157 0 43 chr20 32411490 32411815 -39742067 + AluJo SINE Alu 1 311 -1 728 120 64 0 chr20 32411823 32411948 -39741934 + L1MA5 LINE L1 6151 6283 -17 24 0 0 0 chr20 32411955 32411979 -39741903 + AT_rich Low_complexity Low_complexity 1 24 0 721 225 0 0 chr20 32411979 32412169 -39741713 + FLAM_A SINE Alu 1 190 0 1753 153 73 0 chr20 32412660 32412935 -39740947 - AluJb SINE Alu -17 295 1 516 235 10 0 chr20 32413529 32413631 -39740251 + L2 LINE L2 3191 3293 -20 1038 183 36 40 chr20 32413631 32413882 -39740000 + Tigger8 DNA MER2_type 261 510 -156 2205 90 3 0 chr20 32413883 32414183 -39739699 + AluSx SINE Alu 1 301 -11 2202 204 88 13 chr20 32414436 32414716 -39739166 - L1ME2 LINE L1 -213 5951 5694 304 28 0 0 chr20 32414716 32414752 -39739130 + (TTTG)n Simple_repeat Simple_repeat 1 48 0 2033 117 3 11 chr20 32414752 32415035 -39738847 - AluSx SINE Alu -1 316 1 2202 204 88 13 chr20 32415035 32415422 -39738460 - L1ME2 LINE L1 -469 5695 5224 192 97 0 0 chr20 32415999 32416030 -39737852 + (TA)n Simple_repeat Simple_repeat 2 32 0 2522 91 3 0 chr20 32416115 32416444 -39737438 - AluSx SINE Alu 0 330 1 2514 84 3 0 chr20 32416669 32416980 -39736902 - AluSx SINE Alu 0 312 1 314 218 82 9 chr20 32416986 32417096 -39736786 + L1ME4a LINE L1 6004 6121 0 2079 134 7 0 chr20 32417136 32417419 -39736463 + AluJo SINE Alu 6 290 -22 235 279 13 38 chr20 32417463 32417542 -39736340 + MIR SINE MIR 56 132 -130 618 151 57 0 chr20 32417559 32417665 -39736217 + AluJo SINE Alu 2 113 -199 181 0 69 0 chr20 32417669 32417698 -39736184 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 917 159 35 75 chr20 32417705 32417906 -39735976 + AluJo SINE Alu 100 292 -20 504 105 0 0 chr20 32417919 32417995 -39735887 + (GGAA)n Simple_repeat Simple_repeat 4 79 0 241 258 103 0 chr20 32418138 32418235 -39735647 - L3 LINE CR1 -50 1527 1421 251 299 23 11 chr20 32418272 32418359 -39735523 + MIR SINE MIR 52 139 -69 336 277 79 0 chr20 32418775 32418876 -39735006 - MIR SINE MIR -103 159 51 2246 117 0 0 chr20 32419418 32419717 -39734165 + AluSx SINE Alu 1 299 -13 453 230 0 174 chr20 32419764 32419861 -39734021 - MIR SINE MIR -79 183 135 2229 110 0 0 chr20 32419861 32420151 -39733731 + AluSx SINE Alu 1 290 -22 453 230 0 174 chr20 32420151 32420249 -39733633 - MIR SINE MIR -127 135 22 317 250 31 10 chr20 32420434 32420530 -39733352 - L2 LINE L2 -58 3255 3158 367 227 357 27 chr20 32420931 32421116 -39732766 + MIR SINE MIR 4 249 -13 271 293 12 0 chr20 32421198 32421280 -39732602 - MIR SINE MIR -93 115 33 1970 169 0 3 chr20 32421302 32421597 -39732285 - AluJo SINE Alu -18 294 1 553 261 113 20 chr20 32421670 32421873 -39732009 + L2 LINE L2 2804 3025 -288 385 206 83 67 chr20 32421878 32422008 -39731874 + L1MC5 LINE L1 7734 7869 -92 2551 71 0 3 chr20 32422008 32422318 -39731564 - AluSc SINE Alu 0 309 1 385 206 83 67 chr20 32422318 32422367 -39731515 + L1MC5 LINE L1 7869 7916 -45 849 133 8 0 chr20 32422386 32422506 -39731376 + AluJo SINE Alu 14 134 -178 2185 118 27 0 chr20 32422684 32422981 -39730901 + AluSq SINE Alu 1 305 -8 6826 69 12 42 chr20 32422989 32423972 -39729910 - SVA Other Other 0 1386 433 944 109 32 106 chr20 32423989 32424716 -39729166 - SVA Other Other -520 866 519 1267 49 8 65 chr20 32424744 32424990 -39728892 - SVA Other Other -520 866 635 6093 55 19 52 chr20 32425023 32425997 -39727885 - SVA Other Other -520 866 1 377 277 30 60 chr20 32426235 32426401 -39727481 - MIR SINE MIR -58 204 44 207 162 0 0 chr20 32426451 32426488 -39727394 + (CA)n Simple_repeat Simple_repeat 1 37 0 371 212 30 10 chr20 32426878 32426977 -39726905 + MIR SINE MIR 44 144 -64 185 188 0 200 chr20 32427026 32427109 -39726773 + MIR SINE MIR 133 198 -64 436 194 41 10 chr20 32427109 32427207 -39726675 + MER5A DNA MER1_type 1 101 -88 413 180 10 16 chr20 32427351 32427441 -39726441 + MER5A DNA MER1_type 86 189 0 226 229 0 0 chr20 32427441 32427487 -39726395 + MIR SINE MIR 191 236 -26 424 206 40 56 chr20 32427688 32427814 -39726068 - MIR3 SINE MIR -52 156 33 451 285 44 25 chr20 32428370 32428528 -39725354 + MER5A DNA MER1_type 1 161 -28 541 192 31 62 chr20 32430393 32430523 -39723359 - MER91C DNA MER1_type 0 140 15 263 269 13 13 chr20 32431025 32431103 -39722779 - MIR SINE MIR -69 139 62 298 119 90 30 chr20 32431146 32431213 -39722669 - L2 LINE L2 -1 3312 3242 406 331 6 6 chr20 32431758 32431915 -39721967 + MIR SINE MIR 20 176 -86 235 317 19 10 chr20 32432246 32432350 -39721532 - MIR SINE MIR -110 152 48 2526 88 0 0 chr20 32432372 32432678 -39721204 - AluSq SINE Alu -7 306 1 386 303 101 0 chr20 32432790 32432909 -39720973 - L2 LINE L2 0 3272 3142 183 352 117 23 chr20 32433007 32433135 -39720747 + MIR3 SINE MIR 19 158 -50 2414 106 3 0 chr20 32433351 32433662 -39720220 + AluSp SINE Alu 1 312 -1 253 128 0 0 chr20 32433696 32433735 -39720147 + Alu SINE Alu 251 289 -12 316 348 0 22 chr20 32433735 32433824 -39720058 + L1MC4 LINE L1 6617 6703 -1339 2382 107 3 0 chr20 32433857 32434166 -39719716 - AluSx SINE Alu -2 310 1 210 266 62 16 chr20 32434293 32434357 -39719525 - MIR3 SINE MIR -49 159 93 2246 118 3 3 chr20 32434534 32434840 -39719042 + AluSx SINE Alu 1 306 -6 203 286 44 11 chr20 32434843 32434934 -39718948 + L2 LINE L2 2883 2976 -337 188 259 130 0 chr20 32435103 32435157 -39718725 + L2 LINE L2 3141 3201 -71 303 301 48 0 chr20 32435596 32435699 -39718183 - MIR SINE MIR -89 173 66 861 144 0 15 chr20 32436398 32436530 -39717352 + AluJo SINE Alu 5 134 -178 2196 132 0 0 chr20 32436561 32436856 -39717026 + AluSx SINE Alu 1 295 -17 180 0 0 0 chr20 32437318 32437338 -39716544 + (A)n Simple_repeat Simple_repeat 1 20 0 585 209 30 8 chr20 32437340 32437474 -39716408 + MER5A DNA MER1_type 32 168 -21 367 289 32 19 chr20 32438614 32438770 -39715112 - MIR SINE MIR -72 190 33 265 260 94 10 chr20 32438910 32439006 -39714876 - MIR3 SINE MIR -27 181 78 465 209 46 39 chr20 32439682 32439835 -39714047 - L2 LINE L2 -1 3312 3159 240 204 31 112 chr20 32439836 32439934 -39713948 - MIR3 SINE MIR 0 208 119 624 14 0 0 chr20 32439936 32440009 -39713873 + (GA)n Simple_repeat Simple_repeat 1 73 0 498 306 20 0 chr20 32440220 32440367 -39713515 + MIR SINE MIR 107 256 -6 1695 164 0 29 chr20 32440404 32440684 -39713198 - AluJb SINE Alu -31 281 10 592 216 96 6 chr20 32440768 32440935 -39712947 + L2 LINE L2 3132 3313 0 299 318 73 47 chr20 32441124 32441316 -39712566 - MIR SINE MIR 0 262 66 206 280 0 0 chr20 32441353 32441403 -39712479 - MIR SINE MIR -67 141 92 635 225 62 70 chr20 32441416 32441643 -39712239 - MIR SINE MIR -2 260 36 186 43 0 0 chr20 32442627 32442650 -39711232 + (TG)n Simple_repeat Simple_repeat 2 24 0 233 301 206 15 chr20 32442691 32442827 -39711055 + MIR SINE MIR 12 173 -89 520 201 52 81 chr20 32442859 32442941 -39710941 + MIR SINE MIR 81 164 -98 2224 110 3 10 chr20 32442941 32443242 -39710640 + AluSx SINE Alu 1 299 -13 520 201 52 81 chr20 32443242 32443333 -39710549 + MIR SINE MIR 164 249 -13 425 251 139 14 chr20 32443414 32443637 -39710245 - L1ME3A LINE L1 -255 5915 5665 377 294 47 14 chr20 32443646 32443882 -39710000 - MLT1L LTR MaLR -164 451 181 1754 134 0 34 chr20 32444118 32444386 -39709496 + AluSx SINE Alu 36 294 -18 562 226 44 109 chr20 32444461 32444709 -39709173 - MER102b DNA MER1_type 0 341 110 1831 153 7 17 chr20 32444711 32445005 -39708877 - AluJb SINE Alu -21 291 1 2471 92 0 3 chr20 32445009 32445315 -39708567 - AluSp SINE Alu -8 305 1 1312 125 0 5 chr20 32445354 32445531 -39708351 - AluSg/x SINE Alu -1 311 134 2450 66 0 26 chr20 32445531 32445836 -39708046 - AluY SINE Alu -14 297 1 1312 125 0 5 chr20 32445836 32445850 -39708032 - AluSg/x SINE Alu -178 134 121 2331 107 7 3 chr20 32445867 32446176 -39707706 + AluSx SINE Alu 3 312 0 1790 167 4 0 chr20 32446197 32446503 -39707379 + AluJb SINE Alu 1 307 0 654 270 150 50 chr20 32446908 32446981 -39706901 + MLT1L LTR MaLR 220 284 -331 198 0 0 0 chr20 32446981 32447003 -39706879 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 654 270 150 50 chr20 32447003 32447229 -39706653 + MLT1L LTR MaLR 284 549 -66 2389 101 0 0 chr20 32447241 32447537 -39706345 + AluSx SINE Alu 1 296 -16 1205 233 131 50 chr20 32447655 32447984 -39705898 - MLT1J LTR MaLR -38 473 101 2249 120 3 0 chr20 32447984 32448000 -39705882 - AluSx SINE Alu -3 309 295 180 77 0 0 chr20 32448000 32448026 -39705856 + (TTGG)n Simple_repeat Simple_repeat 2 27 0 2249 120 3 0 chr20 32448026 32448317 -39705565 - AluSx SINE Alu -17 295 1 1205 233 131 50 chr20 32448317 32448408 -39705474 - MLT1J LTR MaLR -410 101 19 1772 203 176 7 chr20 32448545 32449108 -39704774 - L1M4 LINE L1 -3006 3140 2483 440 301 148 51 chr20 32449116 32449508 -39704374 - L1ME LINE L1 -302 5819 5390 557 279 59 36 chr20 32449719 32449941 -39703941 + MIR SINE MIR 21 247 -15 558 264 106 19 chr20 32449954 32450162 -39703720 - MIR SINE MIR -2 260 35 203 239 0 0 chr20 32450191 32450237 -39703645 - MIR SINE MIR -63 145 100 530 233 100 7 chr20 32451280 32451430 -39702452 - MIR3 SINE MIR -9 199 36 199 250 181 0 chr20 32451713 32451785 -39702097 - MIR SINE MIR -89 119 35 204 299 30 0 chr20 32452205 32452272 -39701610 + MIR SINE MIR 82 150 -58 207 270 0 0 chr20 32452434 32452497 -39701385 - L2 LINE L2 -300 2972 2910 658 154 0 0 chr20 32452549 32452675 -39701207 + FLAM_C SINE Alu 21 146 0 555 261 57 11 chr20 32453019 32453195 -39700687 + MIR SINE MIR 79 262 0 416 268 22 80 chr20 32453202 32453340 -39700542 - L2 LINE L2 -21 3251 3122 2248 127 0 0 chr20 32453362 32453669 -39700213 + AluSx SINE Alu 1 307 -5 273 235 143 10 chr20 32454163 32454261 -39699621 - MER102a DNA MER1_type -6 324 214 551 193 67 25 chr20 32454265 32454384 -39699498 + FLAM_C SINE Alu 2 125 -18 721 274 94 17 chr20 32454446 32454596 -39699286 + MIR SINE MIR 3 179 -83 2287 102 0 13 chr20 32454596 32454732 -39699150 + AluSx SINE Alu 1 137 -175 2413 82 0 3 chr20 32454732 32455024 -39698858 + AluY SINE Alu 1 291 -20 2287 102 0 13 chr20 32455024 32455190 -39698692 + AluSx SINE Alu 137 299 -13 721 274 94 17 chr20 32455190 32455273 -39698609 + MIR SINE MIR 179 254 -8 326 314 5 77 chr20 32455285 32455401 -39698481 - MER102a DNA MER1_type -149 192 95 1629 192 0 24 chr20 32455401 32455728 -39698154 - AluJo SINE Alu 0 320 1 326 314 5 77 chr20 32455728 32455817 -39698065 - MER102a DNA MER1_type -246 95 1 1749 131 4 0 chr20 32456065 32456309 -39697573 + AluJo SINE Alu 1 245 -67 35 0 0 0 chr20 32456352 32456387 -39697495 + AT_rich Low_complexity Low_complexity 1 35 0 2070 82 99 14 chr20 32456915 32457197 -39696685 + AluSx SINE Alu 7 312 0 312 297 85 68 chr20 32457240 32457533 -39696349 + L2 LINE L2 2395 2692 -622 1706 130 49 52 chr20 32457807 32458114 -39695768 - AluJo SINE Alu -6 306 1 2494 79 0 3 chr20 32458396 32458700 -39695182 - AluSq SINE Alu -10 303 1 3487 116 4 2 chr20 32459571 32460090 -39693792 + MER41B LTR ERV1 1 520 -115 2199 97 28 0 chr20 32460092 32460380 -39693502 - AluSg SINE Alu -14 296 1 284 246 15 0 chr20 32460477 32460542 -39693340 + MLT1J LTR MaLR 3 68 -443 2314 110 10 13 chr20 32460558 32460731 -39693151 - AluSx SINE Alu -3 309 136 2581 73 0 9 chr20 32460731 32461046 -39692836 - AluSp SINE Alu -1 312 1 2314 110 10 13 chr20 32461046 32461181 -39692701 - AluSx SINE Alu -176 136 2 25 31 0 0 chr20 32461191 32461223 -39692659 + AT_rich Low_complexity Low_complexity 1 32 0 1012 273 19 72 chr20 32461293 32461626 -39692256 + MLT1J LTR MaLR 115 423 -88 2170 120 3 0 chr20 32461626 32461917 -39691965 - AluSx SINE Alu -20 292 1 1012 273 19 72 chr20 32461917 32462000 -39691882 + MLT1J LTR MaLR 423 509 -2 1993 223 44 2 chr20 32462003 32462416 -39691466 - MLT1G LTR MaLR 0 590 161 2301 98 7 0 chr20 32462850 32463155 -39690727 + AluSx SINE Alu 1 307 -5 2426 63 0 30 chr20 32463306 32463605 -39690277 + AluY SINE Alu 1 290 -21 2272 116 0 0 chr20 32463622 32463916 -39689966 + AluSg SINE Alu 1 294 -16 1981 166 3 0 chr20 32464094 32464384 -39689498 + AluJb SINE Alu 1 291 -21 768 147 16 0 chr20 32464965 32465094 -39688788 - FLAM_C SINE Alu -2 131 1 2340 91 7 0 chr20 32465308 32465605 -39688277 + AluSp SINE Alu 1 299 -14 2406 64 0 0 chr20 32465753 32466036 -39687846 + AluY SINE Alu 1 320 0 219 54 0 27 chr20 32466036 32466073 -39687809 + (TAAAA)n Simple_repeat Simple_repeat 2 180 0 1933 144 0 4 chr20 32466089 32466394 -39687488 + AluJb SINE Alu 9 312 0 848 142 8 0 chr20 32466479 32466599 -39687283 + AluJb SINE Alu 9 129 -183 199 178 67 0 chr20 32466710 32466755 -39687127 + MIR SINE MIR 202 249 -13 * 215 61 61 0 chr20 32466725 32466758 -39687124 + L2 LINE L2 3265 3299 -14 2471 63 33 0 chr20 32466865 32467165 -39686717 - AluY SINE Alu -1 310 1 2563 67 0 3 chr20 32467165 32467478 -39686404 - AluSq SINE Alu -1 312 1 482 194 31 148 chr20 32467478 32467674 -39686208 + L2 LINE L2 3140 3312 -1 234 174 0 0 chr20 32467912 32467958 -39685924 + (CGTG)n Simple_repeat Simple_repeat 3 48 0 312 234 78 70 chr20 32470405 32470533 -39683349 - MIR SINE MIR -74 188 60 306 308 75 15 chr20 32470969 32471102 -39682780 - L2 LINE L2 -10 3262 3122 22 0 0 0 chr20 32471526 32471548 -39682334 + AT_rich Low_complexity Low_complexity 1 22 0 2434 81 3 0 chr20 32471581 32471877 -39682005 - AluSp SINE Alu -15 298 2 2306 106 0 3 chr20 32471906 32472209 -39681673 + AluSx SINE Alu 1 302 -10 894 159 97 0 chr20 32472248 32472393 -39681489 + FRAM SINE Alu 1 152 -24 2198 125 3 0 chr20 32472641 32472944 -39680938 - AluSx SINE Alu -8 304 1 330 248 44 26 chr20 32472946 32473059 -39680823 - L1MC4a LINE L1 -1906 5902 5788 781 141 160 6 chr20 32473079 32473235 -39680647 + MER5A DNA MER1_type 4 183 -6 730 239 58 26 chr20 32473239 32473387 -39680495 - L1MC4a LINE L1 -2046 5762 5603 2176 96 6 45 chr20 32473387 32473700 -39680182 - AluSx SINE Alu -11 301 1 730 239 58 26 chr20 32473700 32473777 -39680105 - L1MC4a LINE L1 -2205 5603 5530 2176 117 3 19 chr20 32473830 32474147 -39679735 - AluSx SINE Alu 0 312 1 873 208 45 40 chr20 32474845 32474987 -39678895 + MIR SINE MIR 20 165 -97 2279 106 0 17 chr20 32474987 32475289 -39678593 + AluSg SINE Alu 1 297 -13 873 208 45 40 chr20 32475289 32475348 -39678534 + MIR SINE MIR 165 222 -40 716 150 0 0 chr20 32475395 32475515 -39678367 - FLAM_C SINE Alu -1 142 23 2074 101 63 0 chr20 32475824 32476110 -39677772 + AluSq SINE Alu 1 304 -9 433 239 43 29 chr20 32476375 32476513 -39677369 - MIR SINE MIR -122 140 1 1643 116 0 0 chr20 32476598 32476813 -39677069 - AluSg/x SINE Alu -16 296 82 2295 99 3 0 chr20 32476813 32477106 -39676776 - AluSx SINE Alu -17 295 1 1007 150 0 48 chr20 32477637 32477804 -39676078 + FRAM SINE Alu 1 159 -17 984 291 35 9 chr20 32477907 32478250 -39675632 - L1MC/D LINE L1 -2109 5699 5348 2506 80 0 0 chr20 32478254 32478556 -39675326 - AluY SINE Alu -9 302 1 543 179 0 0 chr20 32478682 32478766 -39675116 + FRAM/FAM SINE Alu 1 81 -95 181 320 90 0 chr20 32479140 32479240 -39674642 - L2 LINE L2 -188 3084 2976 219 139 0 0 chr20 32479303 32479339 -39674543 + (A)n Simple_repeat Simple_repeat 1 36 0 1994 152 3 13 chr20 32479387 32479689 -39674193 + AluSx SINE Alu 1 299 -13 2382 78 0 7 chr20 32479704 32480000 -39673882 - AluSg SINE Alu -16 294 1 2186 130 10 0 chr20 32480602 32480894 -39672988 + AluSx SINE Alu 1 295 -17 295 217 145 72 chr20 32481184 32481336 -39672546 - L1ME4a LINE L1 0 6121 5959 21 0 0 0 chr20 32481440 32481461 -39672421 + AT_rich Low_complexity Low_complexity 1 21 0 309 191 24 48 chr20 32481636 32481720 -39672162 - L1ME4a LINE L1 -199 5922 5841 1922 144 10 20 chr20 32481860 32482029 -39671853 - AluJb SINE Alu -12 300 134 2382 93 0 0 chr20 32482029 32482320 -39671562 - AluSg SINE Alu -19 291 1 1922 144 10 20 chr20 32482320 32482449 -39671433 - AluJb SINE Alu -178 134 5 564 165 28 0 chr20 32482538 32482647 -39671235 - FRAM SINE Alu -4 172 61 462 220 195 0 chr20 32482660 32482778 -39671104 - FLAM_C SINE Alu -1 142 2 194 0 39 0 chr20 32482780 32482806 -39671076 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 1850 153 7 3 chr20 32482806 32483088 -39670794 - AluJo SINE Alu -29 283 1 1200 152 13 61 chr20 32483177 32483312 -39670570 + AluSx SINE Alu 1 122 -190 1711 100 0 9 chr20 32483312 32483541 -39670341 + AluSc SINE Alu 83 309 0 1200 152 13 61 chr20 32483541 32483635 -39670247 + AluSx SINE Alu 122 219 -93 271 116 0 0 chr20 32483729 32483772 -39670110 + Alu SINE Alu 251 293 -9 23 0 0 0 chr20 32483862 32483885 -39669997 + AT_rich Low_complexity Low_complexity 1 23 0 2372 95 0 7 chr20 32483947 32484252 -39669630 - AluSc SINE Alu -6 303 1 492 292 176 18 chr20 32484252 32484581 -39669301 - L1MC4a LINE L1 -1979 5829 5449 2323 96 21 0 chr20 32484591 32484882 -39669000 - AluSx SINE Alu -15 297 1 829 241 0 0 chr20 32484942 32485104 -39668778 - FRAM SINE Alu -4 162 1 911 114 45 0 chr20 32485133 32485265 -39668617 - AluSg/x SINE Alu -2 308 171 1143 190 19 0 chr20 32485305 32485516 -39668366 + AluJo SINE Alu 84 298 -14 2368 87 0 0 chr20 32485688 32485988 -39667894 + AluSc SINE Alu 1 300 -9 244 194 28 42 chr20 32486382 32486454 -39667428 - L1ME4a LINE L1 -451 5670 5600 1414 144 42 36 chr20 32486738 32486764 -39667118 - MER88 LTR ERVL 0 464 440 2353 105 0 7 chr20 32486764 32487070 -39666812 + AluSx SINE Alu 1 304 -8 1414 144 42 36 chr20 32487070 32487373 -39666509 - MER88 LTR ERVL -24 440 45 1511 176 107 94 chr20 32487389 32487421 -39666461 + MER88 LTR ERVL 1 31 -433 1785 190 7 0 chr20 32487421 32487721 -39666161 - AluJo SINE Alu -10 302 1 1511 176 107 94 chr20 32487721 32488045 -39665837 + MER88 LTR ERVL 31 349 -115 2195 120 7 0 chr20 32488045 32488345 -39665537 + AluJb SINE Alu 1 302 -10 2413 66 7 10 chr20 32488347 32488648 -39665234 + AluY SINE Alu 1 300 -11 1511 176 107 94 chr20 32488648 32488735 -39665147 + MER88 LTR ERVL 349 454 -10 458 280 60 6 chr20 32489231 32489413 -39664469 - L2 LINE L2 0 3313 3122 2251 92 3 3 chr20 32489624 32489907 -39663975 + AluSq SINE Alu 1 283 -30 797 280 173 8 chr20 32489930 32490589 -39663293 + L2 LINE L2 2529 3311 -2 248 333 50 37 chr20 32490629 32490945 -39662937 - L2 LINE L2 -249 3023 2704 198 249 30 146 chr20 32491852 32492017 -39661865 + MIR SINE MIR 2 147 -115 749 225 134 30 chr20 32492202 32492433 -39661449 + MIR SINE MIR 8 262 0 602 269 42 10 chr20 32492428 32492621 -39661261 - MIR SINE MIR -57 205 7 * 344 294 53 37 chr20 32492693 32492880 -39661002 - MER20B DNA MER1_type -593 190 1 2398 75 10 7 chr20 32493059 32493352 -39660530 + AluSc SINE Alu 1 294 -15 453 304 76 18 chr20 32493391 32493615 -39660267 + MIR SINE MIR 2 238 -24 2104 101 42 3 chr20 32494256 32494544 -39659338 + AluSx SINE Alu 5 303 -9 2019 160 0 6 chr20 32494744 32495056 -39658826 + AluJb SINE Alu 3 312 0 396 254 51 8 chr20 32495393 32495511 -39658371 - MIR SINE MIR -123 139 17 789 243 55 0 chr20 32496328 32496509 -39657373 - MIR SINE MIR -70 192 2 2298 93 7 10 chr20 32496828 32497130 -39656752 - AluSx SINE Alu -11 301 1 2539 54 0 10 chr20 32497193 32497488 -39656394 + AluY SINE Alu 1 292 -19 337 314 81 54 chr20 32497557 32497742 -39656140 - MIR SINE MIR -28 234 45 182 351 117 0 chr20 32498074 32498168 -39655714 - MER5A DNA MER1_type -84 105 1 402 290 57 30 chr20 32498230 32498405 -39655477 + MIR SINE MIR 2 184 -63 660 273 31 82 chr20 32498663 32498919 -39654963 + MIR SINE MIR 2 244 -18 817 159 0 29 chr20 32499026 32499164 -39654718 + AluJo SINE Alu 1 134 -178 1712 138 116 22 chr20 32499267 32499543 -39654339 - AluSx SINE Alu -9 303 2 2355 55 48 3 chr20 32499588 32499879 -39654003 - AluY SINE Alu -7 304 1 2211 91 17 14 chr20 32500017 32500314 -39653568 + AluSx SINE Alu 1 298 -14 915 156 31 0 chr20 32500325 32500485 -39653397 + FRAM SINE Alu 1 165 -1 295 218 209 0 chr20 32500508 32500618 -39653264 - MLT1J LTR MaLR -136 375 243 715 246 31 10 chr20 32502105 32502300 -39651582 - MIR SINE MIR -12 250 52 182 111 44 67 chr20 32502345 32502390 -39651492 + MIR SINE MIR 110 153 -55 1088 305 104 13 chr20 32504080 32504108 -39649774 - MLT1L LTR MaLR -20 595 571 1198 150 77 90 chr20 32504108 32504275 -39649607 + MER46B DNA MER2_type 1 37 -2694 1595 167 8 8 chr20 32504275 32504526 -39649356 + AluJo SINE Alu 37 287 -25 1198 150 77 90 chr20 32504526 32504724 -39649158 + MER46B DNA MER2_type 37 236 0 1088 305 104 13 chr20 32504724 32505232 -39648650 - MLT1L LTR MaLR -44 571 10 279 339 130 26 chr20 32505350 32505580 -39648302 - MLT1K LTR MaLR -210 378 125 604 311 24 19 chr20 32506118 32506327 -39647555 + MIR SINE MIR 2 211 -51 547 120 0 0 chr20 32506446 32506521 -39647361 + AluSg/x SINE Alu 208 282 -27 2496 87 0 0 chr20 32506559 32506858 -39647024 + AluSg SINE Alu 1 299 -11 357 272 88 0 chr20 32507016 32507130 -39646752 - MIR SINE MIR -62 200 77 813 107 113 96 chr20 32507764 32507941 -39645941 + AluSq SINE Alu 124 303 -10 2527 68 0 0 chr20 32507944 32508240 -39645642 + AluY SINE Alu 1 296 -15 193 373 109 0 chr20 32508521 32508631 -39645251 - L2 LINE L2 -10 3262 3141 2042 141 0 3 chr20 32509230 32509521 -39644361 + AluJo SINE Alu 1 290 -22 2288 95 13 25 chr20 32509567 32509882 -39644000 - AluSp SINE Alu -2 311 1 332 321 27 0 chr20 32510053 32510165 -39643717 - MIR SINE MIR -116 146 32 348 263 129 94 chr20 32510225 32510282 -39643600 - MIR SINE MIR -1 261 207 2515 67 3 0 chr20 32510282 32510582 -39643300 + AluY SINE Alu 1 301 -10 348 263 129 94 chr20 32510582 32510695 -39643187 - MIR SINE MIR -55 207 85 2394 91 13 3 chr20 32511244 32511551 -39642331 - AluSq SINE Alu -3 310 1 317 293 172 13 chr20 32511789 32512103 -39641779 + L2 LINE L2 2600 2963 -351 401 176 15 0 chr20 32512200 32512268 -39641614 - AluSg/x SINE Alu -104 196 128 1320 86 0 0 chr20 32512272 32512434 -39641448 - AluSg/x SINE Alu -17 295 134 1907 122 4 0 chr20 32512434 32512725 -39641157 - AluSc SINE Alu 0 309 35 240 263 263 0 chr20 32512811 32512891 -39640991 + L2 LINE L2 3199 3299 -14 288 244 58 0 chr20 32513438 32513524 -39640358 + MIR SINE MIR 73 163 -99 280 257 27 0 chr20 32514420 32514494 -39639388 - L2 LINE L2 0 3313 3238 562 272 38 22 chr20 32514713 32514897 -39638985 + MER5A DNA MER1_type 3 189 0 398 251 84 11 chr20 32514910 32515080 -39638802 - MIR SINE MIR -58 150 2 275 284 96 51 chr20 32515423 32515620 -39638262 - MLT1J LTR MaLR -196 315 110 227 289 202 10 chr20 32515952 32516056 -39637826 - MIR SINE MIR -126 136 13 260 136 51 31 chr20 32516231 32516304 -39637578 - MIR SINE MIR -26 236 166 1750 123 4 0 chr20 32516919 32517163 -39636719 - AluSx SINE Alu -63 249 5 2276 86 7 0 chr20 32517338 32517639 -39636243 + AluSp SINE Alu 1 303 -10 274 307 89 0 chr20 32517712 32517813 -39636069 - L2 LINE L2 -18 3254 3145 1828 166 0 0 chr20 32517838 32518133 -39635749 + AluJb SINE Alu 1 295 -17 470 113 0 31 chr20 32518205 32518409 -39635473 + AluSg/x SINE Alu 71 300 0 2336 88 0 3 chr20 32518427 32518733 -39635149 + AluY SINE Alu 1 305 -6 2268 92 0 7 chr20 32518740 32519046 -39634836 + AluSq SINE Alu 1 304 -9 222 288 61 0 chr20 32519249 32519315 -39634567 + MIR SINE MIR 23 92 -170 320 260 69 61 chr20 32519351 32519527 -39634355 + MER5A DNA MER1_type 16 178 0 279 208 111 0 chr20 32519590 32519662 -39634220 + MIR SINE MIR 33 112 -96 221 240 198 52 chr20 32520132 32520228 -39633654 + MIR SINE MIR 39 148 -60 209 139 23 0 chr20 32521051 32521094 -39632788 + CT-rich Low_complexity Low_complexity 1 44 0 449 346 81 26 chr20 32521252 32521486 -39632396 - L1MC4a LINE L1 -1833 5975 5729 220 226 32 0 chr20 32521553 32521615 -39632267 + CT-rich Low_complexity Low_complexity 1 64 0 186 169 364 39 chr20 32522054 32522131 -39631751 + MIR SINE MIR 82 183 -79 267 342 70 0 chr20 32523955 32524069 -39629813 - MIR SINE MIR -25 237 116 1605 165 158 18 chr20 32525002 32525216 -39628666 - Tigger2a DNA MER2_type -2274 434 251 1832 81 0 4 chr20 32525216 32525451 -39628431 + AluY SINE Alu 1 234 -77 1853 94 0 0 chr20 32525451 32525696 -39628186 + AluSg SINE Alu 49 293 -17 1605 165 158 18 chr20 32525696 32525861 -39628021 - Tigger2a DNA MER2_type -2456 252 1 256 208 139 0 chr20 32525870 32525942 -39627940 - MIR SINE MIR -69 193 112 23 33 0 0 chr20 32526697 32526727 -39627155 + GC_rich Low_complexity Low_complexity 1 30 0 28 29 0 0 chr20 32526743 32526778 -39627104 + GC_rich Low_complexity Low_complexity 1 35 0 25 31 0 0 chr20 32526855 32526887 -39626995 + GC_rich Low_complexity Low_complexity 1 32 0 373 221 23 17 chr20 32526919 32527033 -39626849 + MIR SINE MIR 30 146 -62 1562 127 72 28 chr20 32527047 32527338 -39626544 - AluJb SINE Alu -3 309 6 276 289 10 29 chr20 32527342 32527446 -39626436 + MIR SINE MIR 65 166 -96 314 244 61 0 chr20 32527461 32527543 -39626339 + L2 LINE L2 3184 3270 -2 271 277 181 0 chr20 32527625 32527768 -39626114 + MIR SINE MIR 66 252 -10 929 189 12 0 chr20 32527908 32528077 -39625805 - FRAM SINE Alu -12 164 1 2312 73 3 13 chr20 32528081 32528395 -39625487 - AluY SINE Alu 0 311 1 945 139 139 68 chr20 32528421 32528550 -39625332 + AluSg SINE Alu 3 121 -189 2254 101 0 7 chr20 32528550 32528856 -39625026 + AluSq SINE Alu 1 304 -9 945 139 139 68 chr20 32528856 32528992 -39624890 + AluSg SINE Alu 121 287 -23 2184 102 0 7 chr20 32528999 32529304 -39624578 + AluSx SINE Alu 1 303 -9 2054 118 3 16 chr20 32529304 32529609 -39624273 + AluSg SINE Alu 1 301 -9 1328 184 7 74 chr20 32529612 32529921 -39623961 + AluJo SINE Alu 1 288 -24 1529 154 72 4 chr20 32529921 32530200 -39623682 + AluJo SINE Alu 1 298 -14 895 166 70 0 chr20 32530971 32531128 -39622754 + AluSx SINE Alu 1 168 -144 4842 136 72 32 chr20 32531132 32532657 -39621225 - pTR5 LTR ERV1 0 2438 744 950 87 16 0 chr20 32532658 32532784 -39621098 + AluSx SINE Alu 166 293 -19 2337 85 3 0 chr20 32533111 32533418 -39620464 - AluSp SINE Alu -5 308 1 258 32 0 0 chr20 32533423 32533454 -39620428 + (TG)n Simple_repeat Simple_repeat 2 32 0 1259 164 4 66 chr20 32533504 32533624 -39620258 - AluJo SINE Alu -66 246 149 2330 84 0 3 chr20 32533624 32533935 -39619947 - AluSx SINE Alu -2 310 1 1259 164 4 66 chr20 32533935 32534070 -39619812 - AluJo SINE Alu -163 149 7 332 256 124 16 chr20 32534134 32534255 -39619627 + MIR SINE MIR 20 153 -109 590 111 30 0 chr20 32534632 32534731 -39619151 + U6 snRNA snRNA 1 102 -5 2321 64 3 3 chr20 32535361 32535656 -39618226 + AluSg SINE Alu 1 295 -15 815 128 0 48 chr20 32535702 32535827 -39618055 + FLAM_C SINE Alu 14 132 -11 662 161 89 0 chr20 32535849 32535973 -39617909 + AluJb SINE Alu 1 135 -177 2240 92 3 0 chr20 32535974 32536268 -39617614 + AluSc SINE Alu 1 295 -14 2018 130 3 10 chr20 32536270 32536564 -39617318 + AluSx SINE Alu 1 294 -18 405 0 0 0 chr20 32536564 32536609 -39617273 + (TA)n Simple_repeat Simple_repeat 2 46 0 2146 91 0 14 chr20 32536623 32536920 -39616962 + AluSc SINE Alu 1 293 -16 1089 158 6 0 chr20 32536921 32537086 -39616796 - AluSx SINE Alu -140 172 7 449 116 0 0 chr20 32537091 32537160 -39616722 + L1MB8 LINE L1 6110 6178 0 2224 92 0 3 chr20 32537169 32537461 -39616421 + AluSg SINE Alu 1 291 -19 603 174 122 0 chr20 32537906 32538021 -39615861 - FLAM_A SINE Alu -1 132 4 1189 188 0 31 chr20 32538134 32538270 -39615612 + AluJb SINE Alu 1 130 -182 2008 120 7 0 chr20 32538270 32538582 -39615300 + AluSx SINE Alu 1 314 0 1189 188 0 31 chr20 32538582 32538667 -39615215 + AluJb SINE Alu 130 216 -96 2228 83 10 0 chr20 32538708 32539010 -39614872 - AluSx SINE Alu -6 306 2 2188 215 67 47 chr20 32539129 32539516 -39614366 + MER4B LTR ERV1 4 409 -201 2267 101 0 0 chr20 32539516 32539814 -39614068 - AluSx SINE Alu -14 298 1 2188 215 67 47 chr20 32539814 32540021 -39613861 + MER4B LTR ERV1 409 610 0 235 356 54 7 chr20 32540116 32540225 -39613657 + MIR3 SINE MIR 40 159 -49 2124 74 3 37 chr20 32540225 32540379 -39613503 - AluSg SINE Alu -21 289 148 2366 52 3 10 chr20 32540379 32540686 -39613196 - AluY SINE Alu -6 305 1 2124 74 3 37 chr20 32540686 32540829 -39613053 - AluSg SINE Alu -162 148 2 235 356 54 7 chr20 32540829 32540868 -39613014 + MIR3 SINE MIR 159 195 -13 210 308 87 10 chr20 32540846 32540950 -39612932 + MIR SINE MIR 100 211 -51 * 2032 96 0 11 chr20 32542128 32542463 -39611419 - AluSc SINE Alu 0 332 1 1765 141 17 10 chr20 32542463 32542753 -39611129 - AluJo SINE Alu -8 304 13 558 265 89 62 chr20 32543017 32543109 -39610773 - L1ME3 LINE L1 -332 5830 5742 805 128 0 64 chr20 32543109 32543250 -39610632 - FLAM_C SINE Alu -1 132 1 558 265 89 62 chr20 32543250 32543482 -39610400 - L1ME3 LINE L1 -420 5742 5497 2413 61 0 3 chr20 32543482 32543778 -39610104 - AluY SINE Alu -16 295 1 1461 177 16 60 chr20 32543850 32544034 -39609848 - AluJb SINE Alu -9 303 137 2382 80 0 0 chr20 32544034 32544334 -39609548 - AluSq SINE Alu -13 300 1 1461 177 16 60 chr20 32544334 32544466 -39609416 - AluJb SINE Alu -175 137 1 308 352 5 51 chr20 32544554 32544750 -39609132 + L2 LINE L2 2990 3176 -96 292 318 11 11 chr20 32544805 32544893 -39608989 + MER91A DNA MER1_type 107 194 -2 2103 106 36 0 chr20 32545201 32545502 -39608380 - AluSx SINE Alu 0 312 1 944 117 0 0 chr20 32545517 32545645 -39608237 - FLAM_C SINE Alu -5 128 1 1398 171 19 65 chr20 32545647 32545811 -39608071 - AluJo SINE Alu -14 298 153 2511 65 0 0 chr20 32545811 32546121 -39607761 - AluY SINE Alu -1 310 1 1398 171 19 65 chr20 32546121 32546266 -39607616 - AluJo SINE Alu -159 153 3 1975 124 21 10 chr20 32546283 32546443 -39607439 - AluSx SINE Alu -19 293 127 2426 60 0 7 chr20 32546443 32546743 -39607139 - AluY SINE Alu -13 298 1 1975 124 21 10 chr20 32546743 32546872 -39607010 - AluSx SINE Alu -185 127 1 2177 114 0 0 chr20 32547591 32547889 -39605993 - AluSx SINE Alu -14 298 1 211 286 0 16 chr20 32548795 32548858 -39605024 - MIR SINE MIR -83 179 118 253 125 0 0 chr20 32549154 32549194 -39604688 + MIR SINE MIR 80 119 -143 * 751 276 128 33 chr20 32549181 32549572 -39604310 - L2 LINE L2 -31 3282 2855 442 233 112 0 chr20 32549977 32550093 -39603789 + MIR SINE MIR 31 159 -103 1972 82 0 44 chr20 32550119 32550412 -39603470 - AluSx SINE Alu 0 312 33 359 298 24 24 chr20 32550421 32550545 -39603337 - L2 LINE L2 -1 3312 3189 183 318 16 0 chr20 32550533 32550596 -39603286 + MIR SINE MIR 196 259 -3 * 400 278 56 0 chr20 32550693 32550801 -39603081 - MIR SINE MIR -36 226 113 332 279 8 78 chr20 32550837 32550966 -39602916 + MIR SINE MIR 93 212 -50 292 237 66 40 chr20 32551192 32551210 -39602672 + L1MD2 LINE L1 6105 6121 -238 1722 149 10 10 chr20 32551210 32551505 -39602377 + AluJb SINE Alu 1 295 -17 292 237 66 40 chr20 32551505 32551570 -39602312 + L1MD2 LINE L1 6121 6183 -176 2009 113 31 3 chr20 32551570 32551861 -39602021 + AluSx SINE Alu 2 300 -12 2121 110 7 3 chr20 32551861 32552162 -39601720 + AluSq SINE Alu 1 302 -11 292 237 66 40 chr20 32552162 32552228 -39601654 + L1MD2 LINE L1 6182 6260 -99 * 924 185 142 50 chr20 32552226 32552321 -39601561 + L1ME LINE L1 5492 5577 -589 1589 152 9 109 chr20 32552321 32552651 -39601231 - AluJb SINE Alu -3 299 3 924 185 142 50 chr20 32552651 32552688 -39601194 + L1ME LINE L1 5577 5609 -557 2007 120 0 0 chr20 32552688 32552963 -39600919 + AluSx SINE Alu 1 275 -37 924 185 142 50 chr20 32552963 32553003 -39600879 + L1ME LINE L1 5609 5644 -522 2259 58 0 51 chr20 32553003 32553314 -39600568 + AluY SINE Alu 1 295 -16 924 185 142 50 chr20 32553314 32553442 -39600440 + L1ME LINE L1 5644 5822 -344 2104 93 3 20 chr20 32553447 32553748 -39600134 + AluSx SINE Alu 6 301 -11 2263 90 0 22 chr20 32553748 32554060 -39599822 + AluSg1 SINE Alu 1 305 -4 2500 68 0 0 chr20 32554060 32554369 -39599513 + AluY SINE Alu 1 309 -2 1298 90 0 0 chr20 32554370 32554547 -39599335 + AluY SINE Alu 132 308 -3 2065 128 0 3 chr20 32554547 32554844 -39599038 + AluSx SINE Alu 1 296 -16 1949 158 0 0 chr20 32554888 32555198 -39598684 - AluSx SINE Alu -2 310 1 1485 145 0 0 chr20 32555221 32555448 -39598434 - AluSg/x SINE Alu -5 307 81 2096 120 0 7 chr20 32555502 32555801 -39598081 + AluSg SINE Alu 1 297 -13 2070 103 38 0 chr20 32555812 32556102 -39597780 + AluSx SINE Alu 1 301 -11 2231 84 3 7 chr20 32556796 32557092 -39596790 - AluSg SINE Alu -15 295 1 2359 64 7 0 chr20 32557102 32557397 -39596485 - AluSx SINE Alu -9 303 7 261 311 88 15 chr20 32557506 32557614 -39596268 - MIR SINE MIR -72 136 42 241 257 54 14 chr20 32558421 32558495 -39595387 + MIR3 SINE MIR 78 154 -54 24 0 0 0 chr20 32559066 32559090 -39594792 + GC_rich Low_complexity Low_complexity 1 24 0 198 216 0 0 chr20 32560311 32560348 -39593534 - MER5A DNA MER1_type -24 165 129 212 296 57 23 chr20 32560415 32560503 -39593379 - MIR3 SINE MIR -50 158 68 237 337 0 24 chr20 32561307 32561390 -39592492 - MIR3 SINE MIR -37 171 91 188 284 142 43 chr20 32561431 32561572 -39592310 - MIR SINE MIR 0 262 108 261 283 44 35 chr20 32561721 32561834 -39592048 + MIR SINE MIR 149 262 0 350 305 8 16 chr20 32562517 32562645 -39591237 - MIR SINE MIR 0 262 136 240 319 184 7 chr20 32562728 32562869 -39591013 + MIR SINE MIR 88 253 -9 350 239 0 103 chr20 32562889 32562935 -39590947 - MIR SINE MIR -78 184 135 2059 127 0 7 chr20 32562935 32563234 -39590648 - AluSx SINE Alu -15 297 1 350 239 0 103 chr20 32563234 32563304 -39590578 - MIR SINE MIR -127 135 80 1770 115 57 7 chr20 32563525 32563804 -39590078 - AluSx SINE Alu -19 293 1 2452 81 0 0 chr20 32563804 32564112 -39589770 - AluSx SINE Alu -3 309 1 208 239 165 18 chr20 32564525 32564634 -39589248 + MIR3 SINE MIR 8 132 -76 242 50 0 0 chr20 32564637 32564677 -39589205 - AluSx SINE Alu -3 305 266 1492 131 5 0 chr20 32564677 32564898 -39588984 - AluSx SINE Alu -90 222 1 2101 112 3 10 chr20 32564908 32565212 -39588670 - AluSg SINE Alu -8 302 1 343 260 89 34 chr20 32565343 32565489 -39588393 - L2 LINE L2 -5 3308 3155 265 254 202 18 chr20 32565489 32565603 -39588279 + MER69 DNA AcHobo 1 135 -1091 1799 168 7 0 chr20 32565764 32565940 -39587942 - AluSq SINE Alu -2 311 131 2187 102 7 3 chr20 32565940 32566243 -39587639 - AluSx SINE Alu -8 304 1 1096 165 21 5 chr20 32566243 32566375 -39587507 - AluJo SINE Alu -177 135 1 1799 168 7 0 chr20 32566243 32566375 -39587507 - AluSq SINE Alu -182 131 1 2592 50 0 0 chr20 32566792 32567091 -39586791 - AluY SINE Alu -11 300 2 2419 50 40 3 chr20 32567136 32567468 -39586414 - AluY SINE Alu 0 343 1 2061 82 60 0 chr20 32567468 32567748 -39586134 - AluSp SINE Alu -12 301 5 442 138 0 0 chr20 32567768 32567848 -39586034 - AluS SINE Alu 0 309 230 1199 103 0 6 chr20 32567850 32568006 -39585876 - AluSq SINE Alu -158 155 1 515 118 200 9 chr20 32568102 32568212 -39585670 + FLAM_C SINE Alu 1 131 -2 315 122 0 0 chr20 32568212 32568261 -39585621 + (TG)n Simple_repeat Simple_repeat 2 50 0 345 211 42 0 chr20 32568263 32568334 -39585548 + L1MCa LINE L1 1995 2068 -4358 * 405 305 0 0 chr20 32568289 32568417 -39585465 - L1MC4 LINE L1 -1339 6703 6614 273 163 0 0 chr20 32568417 32568466 -39585416 + (TA)n Simple_repeat Simple_repeat 1 49 0 506 308 20 16 chr20 32568660 32568810 -39585072 - L1ME3A LINE L1 -219 5951 5798 2429 77 7 0 chr20 32568810 32569108 -39584774 - AluSp SINE Alu -13 300 1 506 308 20 16 chr20 32569108 32569210 -39584672 - L1ME3A LINE L1 -372 5798 5698 387 296 0 9 chr20 32569310 32569425 -39584457 - MIR3 SINE MIR -13 195 82 2273 110 0 3 chr20 32569569 32569868 -39584014 + AluSg SINE Alu 1 298 -12 2379 106 0 3 chr20 32569912 32570214 -39583668 + AluSc SINE Alu 2 302 -7 1782 156 41 0 chr20 32570296 32570566 -39583316 - AluJb SINE Alu -31 281 1 2265 105 0 3 chr20 32570574 32570869 -39583013 - AluSx SINE Alu -18 294 1 852 273 91 6 chr20 32570870 32571222 -39582660 + L2 LINE L2 2523 2904 -410 1534 164 18 29 chr20 32571340 32571621 -39582261 - AluJo SINE Alu -2 310 33 1315 83 65 0 chr20 32571621 32571790 -39582092 - AluJb SINE Alu -110 202 23 545 191 18 18 chr20 32571795 32571905 -39581977 - MLT1G LTR MaLR -462 128 19 2409 85 0 16 chr20 32571918 32572234 -39581648 + AluSp SINE Alu 1 311 -2 443 230 63 16 chr20 32572260 32572386 -39581496 + FLAM_A SINE Alu 1 132 -1 1166 101 0 35 chr20 32572528 32572697 -39581185 + AluSx SINE Alu 1 163 -149 1348 174 0 99 chr20 32572713 32573046 -39580836 + AluJb SINE Alu 2 301 -1 701 187 0 8 chr20 32573046 32573169 -39580713 + MLT1H1 LTR MaLR 418 539 -16 489 243 100 21 chr20 32573204 32573344 -39580538 + L2 LINE L2 3161 3311 -2 378 299 43 24 chr20 32573867 32574031 -39579851 - MIR SINE MIR -25 237 71 231 36 0 0 chr20 32574048 32574076 -39579806 + (CAT)n Simple_repeat Simple_repeat 3 30 0 2322 220 48 18 chr20 32574105 32574227 -39579655 + L1MD3 LINE L1 7122 7239 -743 2358 93 3 0 chr20 32574227 32574518 -39579364 - AluSg SINE Alu -18 292 1 2322 220 48 18 chr20 32574518 32574826 -39579056 + L1MD3 LINE L1 7239 7536 -446 1935 152 3 13 chr20 32574826 32575135 -39578747 + AluJb SINE Alu 2 307 -5 2212 97 3 44 chr20 32575144 32575464 -39578418 + AluY SINE Alu 1 307 -4 2322 220 48 18 chr20 32575464 32575699 -39578183 + L1MD3 LINE L1 7543 7982 0 1612 168 4 8 chr20 32575722 32575978 -39577904 + AluJo SINE Alu 1 255 -57 356 271 38 114 chr20 32576033 32576096 -39577786 + L1MDa LINE L1 34 100 -6440 2327 113 0 0 chr20 32576096 32576406 -39577476 + AluSx SINE Alu 3 312 0 356 271 38 114 chr20 32576406 32576659 -39577223 + L1MDa LINE L1 100 326 -6214 1851 165 0 34 chr20 32576737 32576897 -39576985 - AluJb SINE Alu -19 293 146 2489 82 0 3 chr20 32576897 32577203 -39576679 - AluY SINE Alu -6 305 1 1851 165 0 34 chr20 32577203 32577339 -39576543 - AluJb SINE Alu -166 146 7 185 0 40 0 chr20 32577389 32577414 -39576468 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 2056 114 3 33 chr20 32577416 32577715 -39576167 - AluSq SINE Alu -23 290 1 2450 81 13 0 chr20 32577736 32578044 -39575838 - AluSp SINE Alu -1 312 1 405 0 0 0 chr20 32578142 32578187 -39575695 + (CA)n Simple_repeat Simple_repeat 1 45 0 738 165 8 8 chr20 32578211 32578333 -39575549 + AluJo/FLAM SINE Alu 1 123 -175 2355 84 3 3 chr20 32578333 32578629 -39575253 - AluY SINE Alu -15 296 1 30 0 0 0 chr20 32578633 32578663 -39575219 + AT_rich Low_complexity Low_complexity 1 30 0 775 251 71 14 chr20 32578663 32578915 -39574967 + L1M4 LINE L1 2320 2593 -3553 2208 122 0 25 chr20 32578915 32579236 -39574646 + AluSq SINE Alu 1 313 0 775 251 71 14 chr20 32579236 32579278 -39574604 + L1M4 LINE L1 2593 2631 -3515 801 126 0 2 chr20 32579288 32579447 -39574435 - AluSg/x SINE Alu -3 307 118 2337 110 0 0 chr20 32579450 32579760 -39574122 - AluSx SINE Alu -2 310 1 513 199 92 0 chr20 32579763 32579894 -39573988 - L1M4 LINE L1 -3321 2825 2683 1154 171 5 0 chr20 32579897 32580096 -39573786 + AluSg/x SINE Alu 112 311 -1 849 192 46 113 chr20 32580097 32580220 -39573662 + L1M4 LINE L1 2835 2965 -3181 2076 121 3 0 chr20 32580220 32580502 -39573380 - AluSx SINE Alu -29 283 1 849 192 46 113 chr20 32580502 32580576 -39573306 + L1M4 LINE L1 2965 3042 -3104 2021 123 0 60 chr20 32580576 32580747 -39573135 - AluSg SINE Alu -12 298 153 2456 73 0 13 chr20 32580747 32581062 -39572820 - AluYb8 SINE Alu -7 311 1 2021 123 0 60 chr20 32581062 32581207 -39572675 - AluSg SINE Alu -157 153 1 849 192 46 113 chr20 32581207 32581425 -39572457 + L1M4 LINE L1 3042 3223 -2923 774 197 183 90 chr20 32581428 32581583 -39572299 + MLT1C LTR MaLR 152 291 -176 4535 32 2 2 chr20 32581583 32582145 -39571737 + L1PA4 LINE L1 5592 6153 -2 774 197 183 90 chr20 32582145 32582278 -39571604 + MLT1C LTR MaLR 291 467 0 436 186 7 71 chr20 32582278 32582339 -39571543 + L1M4 LINE L1 4269 4332 -1814 2077 151 3 0 chr20 32582339 32582637 -39571245 - AluSx SINE Alu -13 299 1 436 186 7 71 chr20 32582637 32582676 -39571206 + L1M4 LINE L1 4332 4360 -1786 742 156 47 8 chr20 32582676 32582804 -39571078 - FLAM_A SINE Alu 0 133 1 436 186 7 71 chr20 32582804 32582842 -39571040 + L1M4 LINE L1 4360 4399 -1747 2037 109 3 56 chr20 32582844 32583174 -39570708 + AluSq SINE Alu 1 314 0 1795 189 0 10 chr20 32583345 32583651 -39570231 + AluJb SINE Alu 1 303 -9 232 232 54 0 chr20 32583661 32583717 -39570165 - L2 LINE L2 -250 3063 3005 1636 231 61 49 chr20 32583832 32584215 -39569667 - MLT1G1 LTR MaLR 0 595 201 2199 110 0 39 chr20 32584215 32584383 -39569499 - AluSg1 SINE Alu -10 299 147 2464 76 7 0 chr20 32584383 32584684 -39569198 - AluSq SINE Alu -3 310 8 2199 110 0 39 chr20 32584684 32584824 -39569058 - AluSg1 SINE Alu -162 147 3 1636 231 61 49 chr20 32584824 32585028 -39568854 - MLT1G1 LTR MaLR -394 201 1 386 242 58 0 chr20 32585144 32585264 -39568618 - L2 LINE L2 -336 2977 2851 1863 143 10 55 chr20 32585809 32586116 -39567766 - AluJb SINE Alu -19 293 1 851 125 0 29 chr20 32587328 32587464 -39566418 + FLAM_C SINE Alu 2 133 0 2250 108 0 7 chr20 32587585 32587891 -39565991 - AluSx SINE Alu -8 304 1 1745 129 102 0 chr20 32588171 32588457 -39565425 - AluSx SINE Alu 0 312 1 29 0 0 0 chr20 32588526 32588555 -39565327 + AT_rich Low_complexity Low_complexity 1 29 0 198 0 0 0 chr20 32588590 32588612 -39565270 + (C)n Simple_repeat Simple_repeat 1 22 0 685 176 145 0 chr20 32589026 32589179 -39564703 - AluSg/x SINE Alu 0 304 133 281 258 63 78 chr20 32589179 32589304 -39564578 + L2 LINE L2 2756 2881 -391 2410 109 0 0 chr20 32589304 32589617 -39564265 - AluSq SINE Alu 0 313 1 281 258 63 78 chr20 32589617 32589632 -39564250 + L2 LINE L2 2881 2895 -377 2395 90 3 0 chr20 32589632 32589932 -39563950 - AluY SINE Alu -10 301 1 281 258 63 78 chr20 32589932 32590009 -39563873 + L2 LINE L2 2895 2964 -308 270 327 96 19 chr20 32590010 32590114 -39563768 + L2 LINE L2 3152 3263 -9 2207 119 10 10 chr20 32590132 32590442 -39563440 - AluSx SINE Alu 0 312 3 2059 95 4 7 chr20 32590485 32590759 -39563123 - AluY SINE Alu -10 301 29 2210 110 0 13 chr20 32590762 32590942 -39562940 - AluSx SINE Alu 0 312 136 2435 92 3 0 chr20 32590942 32591246 -39562636 - AluSg SINE Alu -5 305 1 2210 110 0 13 chr20 32591246 32591373 -39562509 - AluSx SINE Alu -176 136 9 26 0 0 0 chr20 32591697 32591723 -39562159 + GC_rich Low_complexity Low_complexity 1 26 0 2294 104 0 7 chr20 32593397 32593694 -39560188 - AluSg SINE Alu -15 295 1 353 348 75 43 chr20 32594093 32594375 -39559507 - L2 LINE L2 -19 3253 2963 299 245 142 19 chr20 32594639 32594745 -39559137 - L2 LINE L2 0 3313 3195 369 0 0 0 chr20 32594793 32594834 -39559048 + (CA)n Simple_repeat Simple_repeat 2 42 0 1017 49 83 0 chr20 32594874 32595018 -39558864 + L1PA4 LINE L1 5997 6152 -3 1067 173 0 32 chr20 32595047 32595232 -39558650 + AluJb SINE Alu 134 312 0 328 302 28 30 chr20 32595331 32595476 -39558406 - MIR SINE MIR -61 147 3 2042 122 13 23 chr20 32595540 32595844 -39558038 - AluSg SINE Alu -9 301 1 884 127 8 30 chr20 32595857 32595991 -39557891 - FLAM_C SINE Alu -12 131 1 2642 43 7 0 chr20 32596270 32596573 -39557309 - AluY SINE Alu -4 307 3 912 176 0 0 chr20 32596578 32596720 -39557162 - AluJo SINE Alu -170 142 1 281 283 58 93 chr20 32596722 32596927 -39556955 + L2 LINE L2 2751 2948 -366 436 223 91 8 chr20 32597036 32597157 -39556725 + L2 LINE L2 3178 3308 -5 430 167 125 17 chr20 32597543 32597663 -39556219 + MIR SINE MIR 102 234 -28 1782 94 5 0 chr20 32597724 32597947 -39555935 - AluSx SINE Alu -86 226 3 649 265 121 9 chr20 32598080 32598303 -39555579 - MIR SINE MIR -1 261 14 1154 69 0 14 chr20 32599096 32599241 -39554641 + AluSq/x SINE Alu 1 143 -169 1072 101 0 34 chr20 32599248 32599260 -39554622 - AluSg SINE Alu -167 143 132 2635 59 0 0 chr20 32599260 32599567 -39554315 - AluY SINE Alu -4 307 1 1072 101 0 34 chr20 32599567 32599702 -39554180 - AluSg SINE Alu -178 132 1 648 125 0 0 chr20 32599706 32599802 -39554080 - AluJb SINE Alu -187 125 30 902 218 5 24 chr20 32599830 32600041 -39553841 - LTR16B LTR ERVL 0 464 258 344 174 20 61 chr20 32600052 32600150 -39553732 - LTR41 LTR ERVL -7 766 673 2258 121 7 0 chr20 32600156 32600453 -39553429 + AluSx SINE Alu 1 299 -13 2232 108 7 0 chr20 32600461 32600756 -39553126 + AluSp SINE Alu 1 297 -16 361 215 174 21 chr20 32601217 32601361 -39552521 - LTR41 LTR ERVL -607 166 1 247 325 36 24 chr20 32601361 32601444 -39552438 - LTR16B LTR ERVL -205 259 176 1857 150 41 107 chr20 32601459 32601823 -39552059 - MLT2A2 LTR ERVL 0 554 167 2088 121 4 0 chr20 32601823 32602126 -39551756 - AluSx SINE Alu 0 304 1 1857 150 41 107 chr20 32602126 32602307 -39551575 - MLT2A2 LTR ERVL -387 167 24 2546 72 3 0 chr20 32602307 32602612 -39551270 - AluY SINE Alu -5 306 1 1857 150 41 107 chr20 32602612 32602635 -39551247 - MLT2A2 LTR ERVL -530 24 1 350 343 0 66 chr20 32602637 32602803 -39551079 - LTR16B LTR ERVL -301 163 9 1743 92 21 71 chr20 32602897 32603211 -39550671 - AluSq SINE Alu 0 314 15 412 188 10 31 chr20 32603223 32603319 -39550563 - MLT1B LTR MaLR -280 110 17 1985 147 7 0 chr20 32603346 32603638 -39550244 + AluSx SINE Alu 1 294 -18 1293 247 75 77 chr20 32603818 32604149 -39549733 - MLT1G1 LTR MaLR 0 595 265 2188 114 3 0 chr20 32604149 32604438 -39549444 + AluSc SINE Alu 1 290 -19 1293 247 75 77 chr20 32604438 32604480 -39549402 - MLT1G1 LTR MaLR -330 265 224 2421 89 6 13 chr20 32604480 32604794 -39549088 - AluSx SINE Alu 0 312 1 1293 247 75 77 chr20 32604794 32604977 -39548905 - MLT1G1 LTR MaLR -371 224 39 2445 80 27 0 chr20 32604989 32605326 -39548556 - L1PA10 LINE L1 0 6168 5823 941 158 6 0 chr20 32605326 32605484 -39548398 - FRAM SINE Alu -7 159 1 650 185 0 0 chr20 32605678 32605786 -39548096 + FLAM_C SINE Alu 2 109 -34 2172 100 4 4 chr20 32605798 32606117 -39547765 - AluSc SINE Alu 0 319 1 832 161 18 60 chr20 32606117 32606176 -39547706 - L1MDa LINE L1 -6362 178 118 2165 151 0 0 chr20 32606176 32606487 -39547395 - AluSx SINE Alu -1 311 1 832 161 18 60 chr20 32606487 32606595 -39547287 - L1MDa LINE L1 -6422 118 18 850 240 40 48 chr20 32606608 32606962 -39546920 - L1MC5 LINE L1 -431 7530 7180 646 271 214 7 chr20 32606956 32607259 -39546623 + L1MC/D LINE L1 5355 5720 -2088 * 1279 174 32 9 chr20 32607259 32607477 -39546405 + AluJb SINE Alu 72 294 -18 679 267 54 47 chr20 32607633 32607891 -39545991 + LTR16C LTR ERVL 135 394 -97 577 277 161 5 chr20 32608007 32608025 -39545857 - MIR SINE MIR -1 261 247 2436 63 7 7 chr20 32608025 32608327 -39545555 + AluY SINE Alu 1 302 -9 577 277 161 5 chr20 32608327 32608532 -39545350 - MIR SINE MIR -15 247 3 29 0 0 0 chr20 32608783 32608812 -39545070 + AT_rich Low_complexity Low_complexity 1 29 0 787 151 24 0 chr20 32608862 32608988 -39544894 - FLAM_C SINE Alu -3 130 2 2398 95 0 3 chr20 32608988 32609294 -39544588 - AluSq SINE Alu -8 305 1 2053 107 20 3 chr20 32609719 32610017 -39543865 + AluSx SINE Alu 1 303 -9 2393 100 3 0 chr20 32610056 32610365 -39543517 - AluSp SINE Alu -3 310 1 2414 93 0 31 chr20 32610387 32610710 -39543172 - AluSq SINE Alu 0 313 1 2293 112 3 13 chr20 32610853 32611167 -39542715 - AluSx SINE Alu -1 311 1 1992 157 0 3 chr20 32611169 32611468 -39542414 - AluJb SINE Alu -14 298 1 782 153 0 23 chr20 32611547 32611678 -39542204 + FLAM_C SINE Alu 3 130 -3 24 0 0 0 chr20 32611763 32611787 -39542095 + AT_rich Low_complexity Low_complexity 1 24 0 2202 127 0 0 chr20 32611801 32612100 -39541782 + AluSx SINE Alu 1 299 -13 362 299 33 73 chr20 32612100 32612209 -39541673 - L1M4 LINE L1 -2200 3946 3834 2446 109 0 0 chr20 32612209 32612521 -39541361 + AluSx SINE Alu 1 312 0 362 299 33 73 chr20 32612521 32612685 -39541197 - L1M4 LINE L1 -2312 3834 3684 283 171 26 13 chr20 32612685 32612761 -39541121 + CT-rich Low_complexity Low_complexity 3 79 0 2413 64 0 3 chr20 32612782 32613094 -39540788 - AluY SINE Alu 0 312 2 2095 109 3 62 chr20 32613386 32613708 -39540174 - AluSx SINE Alu -3 309 7 2350 73 0 61 chr20 32613738 32614067 -39539815 - AluSg SINE Alu -1 309 1 24 32 0 0 chr20 32614126 32614157 -39539725 + AT_rich Low_complexity Low_complexity 1 31 0 1314 117 164 107 chr20 32614493 32614774 -39539108 + AluSx SINE Alu 1 297 -15 275 229 76 17 chr20 32614776 32614894 -39538988 + L1MC4a LINE L1 5854 5978 -1830 1949 125 18 4 chr20 32614902 32615213 -39538669 + AluJo SINE Alu 1 315 0 225 0 0 0 chr20 32615586 32615611 -39538271 + (CGGGG)n Simple_repeat Simple_repeat 4 28 0 283 330 4 33 chr20 32615819 32615957 -39537925 - MIR SINE MIR -46 162 29 211 346 77 13 chr20 32615974 32616130 -39537752 + L2 LINE L2 2620 2785 -529 227 316 12 76 chr20 32616231 32616402 -39537480 + L2 LINE L2 2937 3096 -176 261 271 199 6 chr20 32616456 32616637 -39537245 + L2 LINE L2 2443 2658 -656 1332 139 84 17 chr20 32616641 32616879 -39537003 + MER39 LTR ERV1 4 257 -450 365 271 10 11 chr20 32616879 32616973 -39536909 - L1MC4 LINE L1 -1341 6981 1995 * 381 131 0 0 chr20 32616963 32617024 -39536858 + (CA)n Simple_repeat Simple_repeat 2 62 0 2149 25 0 12 chr20 32617038 32617279 -39536603 - AluY SINE Alu -18 293 56 355 180 0 0 chr20 32617279 32617340 -39536542 + MER39 LTR ERV1 242 302 -405 1357 180 20 16 chr20 32617350 32617595 -39536287 + AluJo SINE Alu 51 296 -16 394 107 80 27 chr20 32617608 32617683 -39536199 + MER39 LTR ERV1 361 439 -268 602 209 31 16 chr20 32617683 32617812 -39536070 - AluJo SINE Alu -173 139 9 381 125 42 28 chr20 32617820 32617892 -39535990 + MER39 LTR ERV1 635 707 0 332 260 122 32 chr20 32617912 32618035 -39535847 + L2 LINE L2 3173 3306 -7 * 463 178 140 19 chr20 32618029 32618136 -39535746 + L2 LINE L2 3133 3252 -20 331 336 17 0 chr20 32618126 32618242 -39535640 - MIR3 SINE MIR -48 160 43 * 227 310 33 51 chr20 32620128 32620381 -39533501 - L2 LINE L2 -284 2988 2744 442 273 53 7 chr20 32620834 32620984 -39532898 - MIR SINE MIR -71 191 35 2321 87 17 0 chr20 32621014 32621303 -39532579 + AluSx SINE Alu 1 294 -18 270 0 0 0 chr20 32621320 32621350 -39532532 + (TG)n Simple_repeat Simple_repeat 2 31 0 288 280 121 6 chr20 32621373 32621530 -39532352 + MER102a DNA MER1_type 128 302 -28 658 249 107 21 chr20 32621773 32622144 -39531738 + L2 LINE L2 2721 3114 -199 1927 154 55 0 chr20 32622146 32622439 -39531443 - AluSx SINE Alu -3 309 1 2477 80 3 3 chr20 32622439 32622740 -39531142 - AluSp SINE Alu -12 301 1 484 182 152 0 chr20 32622744 32622843 -39531039 - FLAM_A SINE Alu -6 136 23 1968 139 3 23 chr20 32622884 32623194 -39530688 - AluJo SINE Alu -8 304 1 2074 100 54 0 chr20 32623294 32623573 -39530309 - AluSx SINE Alu -18 294 1 223 247 137 0 chr20 32623576 32623649 -39530233 + L2 LINE L2 3149 3231 -41 190 250 50 0 chr20 32623675 32623715 -39530167 - L2 LINE L2 -10 3303 3262 * 309 309 242 11 chr20 32623682 32623860 -39530022 - MIR SINE MIR -13 249 31 200 297 11 66 chr20 32625035 32625126 -39528756 - MIR SINE MIR -85 123 38 182 286 238 0 chr20 32625443 32625506 -39528376 - L2 LINE L2 -46 3267 3190 516 191 139 0 chr20 32625507 32625622 -39528260 + MER106A DNA MER1_type 5 135 -101 310 124 79 79 chr20 32625718 32625807 -39528075 - L1MC4 LINE L1 -1339 6703 6615 448 144 45 45 chr20 32625808 32625919 -39527963 + MER106B DNA MER1_type 949 1059 0 232 183 83 0 chr20 32626005 32626018 -39527864 - L2 LINE L2 -329 2984 2973 2273 122 3 0 chr20 32626018 32626314 -39527568 + AluSq SINE Alu 1 297 -16 232 183 83 0 chr20 32626314 32626360 -39527522 - L2 LINE L2 -340 2973 2920 188 270 68 27 chr20 32626377 32626451 -39527431 + L2 LINE L2 3111 3187 -85 721 183 36 22 chr20 32626694 32626831 -39527051 - FLAM_C SINE Alu 0 143 5 267 231 92 0 chr20 32626836 32626901 -39526981 + MIR SINE MIR 60 130 -78 2204 121 0 7 chr20 32626904 32627209 -39526673 - AluSx SINE Alu -9 303 1 1440 153 21 59 chr20 32627233 32627521 -39526361 + AluJo SINE Alu 36 312 0 241 248 19 105 chr20 32627683 32627788 -39526094 + L2 LINE L2 3177 3272 0 308 281 237 0 chr20 32627792 32627931 -39525951 - MIR SINE MIR -71 191 20 482 345 46 0 chr20 32628055 32628293 -39525589 - MIR SINE MIR -11 251 3 193 288 83 91 chr20 32628355 32628430 -39525452 - MIR SINE MIR -117 145 70 1755 177 0 20 chr20 32628430 32628729 -39525153 + AluJb SINE Alu 9 301 -11 193 288 83 91 chr20 32628729 32628785 -39525097 - MIR SINE MIR -192 70 15 182 250 91 0 chr20 32630050 32630094 -39523788 - L2 LINE L2 -15 3257 3210 * 1002 252 9 9 chr20 32630061 32630283 -39523599 - MIR SINE MIR -24 238 17 345 284 65 65 chr20 32630632 32630801 -39523081 - L3 LINE CR1 -99 1478 1310 398 175 26 143 chr20 32630978 32631018 -39522864 + MIR SINE MIR 127 170 -92 2318 113 0 7 chr20 32631018 32631319 -39522563 - AluSx SINE Alu -13 299 1 398 175 26 143 chr20 32631319 32631432 -39522450 + MIR SINE MIR 170 262 0 189 314 157 43 chr20 32631504 32631714 -39522168 + L2 LINE L2 2866 3099 -173 273 250 113 106 chr20 32632126 32632286 -39521596 + MIR3 SINE MIR 21 181 -27 192 262 0 49 chr20 32632830 32632891 -39520991 - MIR SINE MIR -134 74 17 220 247 108 32 chr20 32633198 32633291 -39520591 - MIR SINE MIR -72 136 37 * 377 360 58 0 chr20 32633287 32633459 -39520423 + MIR SINE MIR 30 211 -51 2022 104 0 75 chr20 32633509 32633816 -39520066 - AluSx SINE Alu -28 284 1 305 276 89 24 chr20 32633926 32634049 -39519833 - MIR SINE MIR -64 198 68 1393 216 122 59 chr20 32634499 32635202 -39518680 - L2 LINE L2 0 3313 2547 1466 203 37 7 chr20 32635202 32635473 -39518409 + AluJb SINE Alu 1 279 -33 1393 216 122 59 chr20 32635473 32635547 -39518335 - L2 LINE L2 -766 2547 2479 233 284 119 0 chr20 32635525 32635634 -39518248 + MIR3 SINE MIR 76 197 -11 * 180 97 0 0 chr20 32635960 32635991 -39517891 + (ACTG)n Simple_repeat Simple_repeat 4 34 0 190 236 55 0 chr20 32636165 32636220 -39517662 - MIR3 SINE MIR 0 208 151 1874 159 0 30 chr20 32636287 32636589 -39517293 - AluJb SINE Alu -19 293 1 1363 262 159 17 chr20 32636691 32637321 -39516561 + L2 LINE L2 2458 3227 -86 2574 80 0 0 chr20 32637321 32637634 -39516248 + AluSq SINE Alu 1 313 0 1363 262 159 17 chr20 32637634 32637736 -39516146 + L2 LINE L2 3227 3313 0 217 237 119 0 chr20 32637853 32637912 -39515970 - MIR3 SINE MIR -31 177 112 2482 77 6 10 chr20 32638955 32639267 -39514615 + AluY SINE Alu 1 311 0 457 304 31 12 chr20 32639395 32639556 -39514326 + MIR3 SINE MIR 40 203 -5 392 226 23 58 chr20 32639588 32639730 -39514152 + MIR SINE MIR 2 140 -68 353 258 92 25 chr20 32640023 32640143 -39513739 - MIR SINE MIR -115 147 20 313 344 74 6 chr20 32640696 32640859 -39513023 + MIR SINE MIR 15 188 -74 685 192 0 8 chr20 32640871 32640991 -39512891 + FLAM_C SINE Alu 2 120 -23 207 0 0 0 chr20 32640991 32641014 -39512868 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 204 200 0 0 chr20 32641028 32641063 -39512819 + L2 LINE L2 3261 3295 -18 2097 72 6 90 chr20 32641204 32641536 -39512346 + AluSc SINE Alu 1 304 -5 200 214 192 26 chr20 32641579 32641704 -39512178 + MIR SINE MIR 21 165 -43 519 206 217 33 chr20 32641734 32641918 -39511964 + MIR SINE MIR 19 236 -26 2219 128 3 3 chr20 32641996 32642345 -39511537 + AluSx SINE Alu 1 349 0 782 237 43 39 chr20 32642443 32642722 -39511160 + L1MC4a LINE L1 5587 5866 -1942 852 157 0 0 chr20 32642930 32643051 -39510831 + FLAM_C SINE Alu 1 121 -22 281 153 0 17 chr20 32643061 32643120 -39510762 + GA-rich Low_complexity Low_complexity 4 61 0 249 197 0 45 chr20 32643157 32643223 -39510659 + G-rich Low_complexity Low_complexity 2 64 0 1055 180 10 5 chr20 32643247 32643441 -39510441 - AluSx SINE Alu -117 195 1 582 239 0 22 chr20 32643443 32643577 -39510305 - AluJo/FLAM SINE Alu -171 131 1 2294 107 0 3 chr20 32643593 32643891 -39509991 - AluSx SINE Alu -15 297 1 2298 100 7 0 chr20 32643897 32644196 -39509686 - AluSx SINE Alu -11 301 1 2481 76 0 7 chr20 32644460 32644764 -39509118 + AluSp SINE Alu 2 303 -10 1608 184 16 42 chr20 32644807 32645117 -39508765 - AluJb SINE Alu -10 302 1 412 195 119 25 chr20 32645127 32645286 -39508596 - L1MC5 LINE L1 -33 7928 7755 1175 138 0 6 chr20 32645300 32645467 -39508415 - AluSg/x SINE Alu -16 294 129 2405 78 7 13 chr20 32645597 32645905 -39507977 + AluSx SINE Alu 7 312 0 1832 117 4 4 chr20 32645995 32646291 -39507591 + AluSx SINE Alu 42 337 0 293 138 0 92 chr20 32646294 32646359 -39507523 + AluSg/x SINE Alu 135 193 -107 1011 279 113 19 chr20 32646359 32646754 -39507128 + L1ME3A LINE L1 5214 5571 -599 1036 169 11 11 chr20 32646754 32646943 -39506939 + MER5A DNA MER1_type 1 189 0 1011 279 113 19 chr20 32646943 32647207 -39506675 + L1ME3A LINE L1 5571 5937 -233 2245 103 10 16 chr20 32647216 32647351 -39506531 + AluSg SINE Alu 1 135 -175 2157 109 0 7 chr20 32647351 32647645 -39506237 + AluSg SINE Alu 1 292 -18 2245 103 10 16 chr20 32647645 32647821 -39506061 + AluSg SINE Alu 135 310 0 26 50 0 0 chr20 32647865 32647905 -39505977 + AT_rich Low_complexity Low_complexity 1 40 0 1420 179 101 15 chr20 32647908 32648176 -39505706 + AluJo SINE Alu 1 291 -21 1831 158 10 17 chr20 32648253 32648551 -39505331 - AluJo SINE Alu -10 302 7 590 276 64 60 chr20 32649341 32649520 -39504362 - MIR SINE MIR -1 261 79 602 180 74 0 chr20 32649520 32649642 -39504240 + FLAM_C SINE Alu 2 132 -1 590 276 64 60 chr20 32649642 32649712 -39504170 - MIR SINE MIR -183 79 11 1369 258 157 21 chr20 32649723 32650173 -39503709 + L2 LINE L2 2395 2782 -531 1485 182 81 27 chr20 32650173 32650469 -39503413 - AluJo SINE Alu 0 312 1 1369 258 157 21 chr20 32650469 32650672 -39503210 + L2 LINE L2 2782 2956 -357 849 169 0 0 chr20 32650672 32650802 -39503080 - FLAM_C SINE Alu -3 130 1 1369 258 157 21 chr20 32650802 32650955 -39502927 + L2 LINE L2 2956 3313 0 907 172 0 69 chr20 32651352 32651496 -39502386 + AluJo SINE Alu 1 133 -179 2335 97 17 0 chr20 32651496 32651795 -39502087 + AluSx SINE Alu 1 304 -8 907 172 0 69 chr20 32651795 32651824 -39502058 + AluJo SINE Alu 133 162 -150 246 354 77 0 chr20 32651829 32651959 -39501923 + MIR SINE MIR 117 256 -6 2495 74 0 0 chr20 32652161 32652459 -39501423 - AluY SINE Alu -13 298 1 439 260 10 0 chr20 32652462 32652566 -39501316 + MIR SINE MIR 96 200 -62 2353 112 0 0 chr20 32652615 32652910 -39500972 - AluSx SINE Alu -17 295 1 307 217 33 0 chr20 32652912 32652972 -39500910 + L2 LINE L2 2691 2752 -562 1608 196 28 11 chr20 32652973 32653258 -39500624 - AluJo SINE Alu -22 290 1 1964 166 7 3 chr20 32653260 32653562 -39500320 - AluJb SINE Alu -9 303 1 522 321 69 26 chr20 32654359 32654603 -39499279 + MIR SINE MIR 6 257 -5 617 288 33 42 chr20 32654754 32654966 -39498916 + L2 LINE L2 3104 3313 0 2352 82 3 3 chr20 32655782 32656074 -39497808 - AluSc SINE Alu -17 292 1 233 229 0 121 chr20 32656397 32656480 -39497402 + MIR SINE MIR 172 244 -18 1076 293 83 36 chr20 32656573 32657074 -39496808 - L2 LINE L2 -4 3309 2779 1712 149 3 70 chr20 32657074 32657229 -39496653 + AluSg SINE Alu 2 127 -183 1962 134 7 0 chr20 32657229 32657521 -39496361 - AluSp SINE Alu -6 307 14 1712 149 3 70 chr20 32657521 32657681 -39496201 + AluSg SINE Alu 127 296 -14 1076 293 83 36 chr20 32657681 32657756 -39496126 - L2 LINE L2 -534 2779 2709 2112 119 7 10 chr20 32657758 32658061 -39495821 - AluSq SINE Alu -11 302 1 1122 83 0 0 chr20 32658064 32658197 -39495685 - AluSq/x SINE Alu -179 133 1 2307 106 0 3 chr20 32658209 32658510 -39495372 - AluSx SINE Alu -12 300 1 2325 103 3 0 chr20 32658516 32658816 -39495066 - AluSx SINE Alu -11 301 1 2339 85 10 3 chr20 32658823 32659118 -39494764 - AluSg SINE Alu -13 297 1 213 157 0 129 chr20 32659150 32659220 -39494662 + MIR3 SINE MIR 145 205 -3 235 287 169 29 chr20 32659604 32659740 -39494142 - L2 LINE L2 -2 3270 3116 628 241 175 6 chr20 32659805 32659971 -39493911 + MIR SINE MIR 29 222 -40 679 281 23 6 chr20 32660051 32660222 -39493660 - MIR SINE MIR -74 188 15 185 256 0 0 chr20 32660250 32660289 -39493593 + L2 LINE L2 3214 3252 -20 239 211 26 66 chr20 32661103 32661179 -39492703 - MIR SINE MIR -3 259 187 346 233 129 52 chr20 32661291 32661407 -39492475 - MIR SINE MIR -70 192 68 286 315 83 33 chr20 32661515 32661696 -39492186 - MIR SINE MIR -45 217 28 253 284 15 0 chr20 32661727 32661794 -39492088 - MIR SINE MIR -16 246 179 362 281 56 104 chr20 32662116 32662215 -39491667 - MIR SINE MIR -16 246 144 2549 80 3 0 chr20 32662215 32662527 -39491355 + AluSp SINE Alu 1 313 0 362 281 56 104 chr20 32662527 32662676 -39491206 - MIR SINE MIR -118 144 10 1946 141 0 24 chr20 32664097 32664270 -39489612 - AluSx SINE Alu -29 283 118 2600 50 0 25 chr20 32664270 32664588 -39489294 + AluY SINE Alu 1 310 -1 1946 141 0 24 chr20 32664588 32664704 -39489178 - AluSx SINE Alu -194 118 1 574 225 70 35 chr20 32664828 32664970 -39488912 - L2 LINE L2 -2 3311 3165 326 272 0 29 chr20 32664977 32665080 -39488802 - L2 LINE L2 -272 3041 2942 181 275 0 0 chr20 32665072 32665112 -39488770 - MIR SINE MIR -84 178 139 * 229 186 23 0 chr20 32665113 32665156 -39488726 - MIR SINE MIR -102 160 117 353 329 123 41 chr20 32665689 32665908 -39487974 + MIR SINE MIR 26 262 0 214 299 93 21 chr20 32666233 32666330 -39487552 + L2 LINE L2 3168 3271 -1 208 248 277 0 chr20 32666411 32666512 -39487370 + MIR SINE MIR 37 165 -97 422 275 85 34 chr20 32666592 32666746 -39487136 + MIR SINE MIR 22 185 -61 234 338 0 13 chr20 32666749 32666826 -39487056 + MIR SINE MIR 16 91 -171 1095 188 15 5 chr20 32666998 32667200 -39486682 + MIR SINE MIR 59 262 0 257 240 0 0 chr20 32668520 32668578 -39485304 - MIR SINE MIR -97 111 53 316 257 40 51 chr20 32668578 32668736 -39485146 + MIR SINE MIR 58 212 -50 331 278 83 9 chr20 32668942 32669050 -39484832 - MIR3 SINE MIR -45 163 48 193 271 248 23 chr20 32669267 32669396 -39484486 - MIR SINE MIR -60 202 45 413 247 275 64 chr20 32669598 32669711 -39484171 + L2 LINE L2 2550 2638 -675 2270 75 7 0 chr20 32669711 32670006 -39483876 + AluY SINE Alu 1 297 -14 413 247 275 64 chr20 32670006 32670291 -39483591 + L2 LINE L2 2638 3026 -287 1094 155 130 5 chr20 32670309 32670516 -39483366 + MER34C LTR ERV1 1 233 -352 895 140 0 43 chr20 32670550 32670714 -39483168 - AluJb SINE Alu -12 300 144 525 186 93 73 chr20 32670781 32670985 -39482897 + LTR48 LTR ERV1 580 787 0 793 230 84 54 chr20 32670985 32671246 -39482636 + L2 LINE L2 3045 3313 0 222 341 71 0 chr20 32671334 32671419 -39482463 - L2 LINE L2 -23 3249 3159 436 263 102 38 chr20 32671428 32671614 -39482268 - L3 LINE CR1 -176 1401 1204 2374 85 3 0 chr20 32673092 32673398 -39480484 + AluSp SINE Alu 1 307 -6 203 343 10 40 chr20 32673662 32673761 -39480121 + MIR SINE MIR 11 106 -156 265 299 124 0 chr20 32673846 32673943 -39479939 + L2 LINE L2 3204 3312 -1 239 233 0 0 chr20 32673942 32673985 -39479897 + L2 LINE L2 3210 3252 -20 * 360 300 0 11 chr20 32675395 32675485 -39478397 - MIR SINE MIR -62 146 58 224 77 26 0 chr20 32678824 32678863 -39475019 + (CAGT)n Simple_repeat Simple_repeat 4 43 0 514 213 39 31 chr20 32678947 32679074 -39474808 + MIR SINE MIR 91 218 -44 1602 55 0 5 chr20 32679074 32679276 -39474606 + AluSx SINE Alu 1 201 -111 339 249 78 78 chr20 32679314 32679519 -39474363 - L1MC/D LINE L1 -2288 5520 5316 2118 114 0 13 chr20 32679549 32679865 -39474017 - AluSx SINE Alu 0 312 1 1722 152 20 3 chr20 32679865 32680162 -39473720 - AluJb SINE Alu -10 302 1 2243 84 3 0 chr20 32680172 32680469 -39473413 - AluSg SINE Alu -12 298 1 973 132 63 181 chr20 32681048 32681396 -39472486 - AluYb8 SINE Alu 0 308 2 2046 128 0 0 chr20 32681441 32681737 -39472145 + AluSg SINE Alu 1 296 -14 1518 160 3 69 chr20 32681748 32682066 -39471816 + AluJb SINE Alu 1 297 -15 228 235 94 0 chr20 32682068 32682153 -39471729 + L1ME3A LINE L1 5853 5945 -225 509 255 21 28 chr20 32682169 32682310 -39471572 + MLT1F1 LTR MaLR 1 140 -402 1367 126 19 5 chr20 32682336 32682550 -39471332 - AluJb SINE Alu -11 301 85 2265 89 0 16 chr20 32682594 32682907 -39470975 + AluY SINE Alu 1 308 -3 812 146 230 34 chr20 32682912 32683192 -39470690 + MLT1F1 LTR MaLR 163 560 -7 1701 166 28 0 chr20 32683256 32683546 -39470336 + AluSx SINE Alu 1 298 -14 2169 112 0 6 chr20 32683682 32683994 -39469888 + AluSg SINE Alu 1 310 0 771 159 0 29 chr20 32684242 32684380 -39469502 - L1PB3 LINE L1 -13 6141 6008 1979 117 31 3 chr20 32684420 32684711 -39469171 + AluSx SINE Alu 1 299 -13 1325 147 4 38 chr20 32684844 32685082 -39468800 - AluJo SINE Alu -10 302 73 2274 88 3 0 chr20 32685123 32685419 -39468463 + AluSx SINE Alu 1 297 -15 2380 68 0 0 chr20 32685420 32685716 -39468166 + AluY SINE Alu 1 296 -15 1503 191 93 31 chr20 32685720 32686075 -39467807 - LTR48 LTR ERV1 -410 377 1 698 173 0 0 chr20 32686157 32686267 -39467615 - AluJb SINE Alu -11 301 192 863 209 0 0 chr20 32686546 32686709 -39467173 - AluJb SINE Alu -17 295 133 2221 81 7 0 chr20 32686817 32687114 -39466768 + AluSx SINE Alu 3 301 -11 2163 111 7 0 chr20 32687166 32687473 -39466409 - AluSq SINE Alu -4 309 1 863 300 21 8 chr20 32687639 32687882 -39466000 + MIR SINE MIR 13 258 -4 2220 69 7 0 chr20 32687969 32688257 -39465625 - AluSq SINE Alu -23 290 1 365 260 136 30 chr20 32688269 32688438 -39465444 - L1MC4a LINE L1 -1926 5882 5696 210 266 47 0 chr20 32688498 32688562 -39465320 + MIR3 SINE MIR 142 208 0 189 74 0 0 chr20 32688724 32688751 -39465131 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 753 212 12 35 chr20 32689027 32689197 -39464685 + L2 LINE L2 3129 3294 -19 2009 117 17 0 chr20 32689314 32689614 -39464268 + AluSq SINE Alu 1 305 -8 955 165 0 6 chr20 32689614 32689778 -39464104 + AluSg/x SINE Alu 134 296 -16 382 211 119 0 chr20 32689828 32689954 -39463928 - L1MC4a LINE L1 -657 5507 5366 1668 136 0 78 chr20 32689955 32690137 -39463745 - AluJb SINE Alu -6 306 160 2186 114 0 0 chr20 32690137 32690445 -39463437 - AluSg SINE Alu -2 308 1 1668 136 0 78 chr20 32690445 32690594 -39463288 - AluJb SINE Alu -152 160 1 1546 176 75 4 chr20 32690624 32690902 -39462980 - AluJo SINE Alu -3 299 2 2247 86 3 0 chr20 32690985 32691287 -39462595 - AluSp SINE Alu -9 304 2 2412 51 0 7 chr20 32691295 32691591 -39462291 - AluY SINE Alu -17 294 1 823 155 20 7 chr20 32691620 32691768 -39462114 + AluJb SINE Alu 148 297 -15 866 122 0 0 chr20 32691798 32691921 -39461961 - AluSg/x SINE Alu -21 291 169 558 197 72 54 chr20 32691948 32692171 -39461711 - L1MC5 LINE L1 -48 7913 7687 1782 125 40 3 chr20 32692178 32692475 -39461407 + AluSq SINE Alu 6 313 0 310 143 95 12 chr20 32692503 32692587 -39461295 - L1MC5 LINE L1 -491 7470 7380 2164 92 0 16 chr20 32692770 32693073 -39460809 - AluSx SINE Alu -14 298 1 530 222 0 0 chr20 32693185 32693293 -39460589 - FLAM_A SINE Alu -34 108 1 284 321 46 9 chr20 32693326 32693435 -39460447 + MIR SINE MIR 40 152 -110 267 273 68 53 chr20 32694387 32694519 -39459363 - MIR SINE MIR -42 220 87 197 309 18 0 chr20 32695545 32695600 -39458282 + L2 LINE L2 3250 3305 -8 2157 111 0 13 chr20 32696018 32696197 -39457685 - AluSx SINE Alu 0 312 137 2140 103 0 10 chr20 32696197 32696497 -39457385 - AluSc SINE Alu -12 297 1 2157 111 0 13 chr20 32696497 32696633 -39457249 - AluSx SINE Alu -175 137 1 2161 92 7 13 chr20 32696893 32697196 -39456686 - AluSx SINE Alu -11 301 1 404 219 136 16 chr20 32697439 32697583 -39456299 - L1ME4a LINE L1 -12 6109 5984 1959 143 3 63 chr20 32697583 32697651 -39456231 + MER2 DNA MER2_type 2 73 -271 1899 124 38 3 chr20 32697651 32697941 -39455941 + AluSx SINE Alu 1 300 -12 1959 143 3 63 chr20 32697941 32698122 -39455760 + MER2 DNA MER2_type 73 263 -81 1510 169 10 34 chr20 32698122 32698418 -39455464 + AluJo SINE Alu 1 289 -23 1959 143 3 63 chr20 32698418 32698445 -39455437 + MER2 DNA MER2_type 263 290 -54 2209 85 20 0 chr20 32698445 32698739 -39455143 - AluSp SINE Alu -13 300 1 1959 143 3 63 chr20 32698739 32698825 -39455057 + MER2 DNA MER2_type 290 344 0 404 219 136 16 chr20 32698825 32698868 -39455014 - L1ME4a LINE L1 -137 5984 5948 2204 68 13 13 chr20 32698868 32699175 -39454707 - AluSg SINE Alu -3 307 1 404 219 136 16 chr20 32699175 32699228 -39454654 - L1ME4a LINE L1 -173 5948 5839 1076 152 0 37 chr20 32699232 32699423 -39454459 - AluJb SINE Alu 0 312 129 266 244 52 96 chr20 32699487 32699522 -39454360 - L1ME4a LINE L1 -485 5636 5601 2127 92 10 13 chr20 32699522 32699825 -39454057 + AluSq SINE Alu 1 302 -11 266 244 52 96 chr20 32699825 32699904 -39453978 - L1ME4a LINE L1 -520 5601 5527 2130 104 7 0 chr20 32700047 32700336 -39453546 - AluSx SINE Alu -11 301 11 2078 94 13 3 chr20 32701837 32702136 -39451746 - AluSg SINE Alu -8 302 1 309 109 0 0 chr20 32702155 32702201 -39451681 + (TCTG)n Simple_repeat Simple_repeat 3 48 0 180 0 0 0 chr20 32702488 32702508 -39451374 + (T)n Simple_repeat Simple_repeat 1 20 0 387 278 60 103 chr20 32703370 32703622 -39450260 + MIR SINE MIR 21 261 -1 2447 53 0 3 chr20 32703665 32703964 -39449918 - AluY SINE Alu -13 298 1 1027 270 25 0 chr20 32703991 32704232 -39449650 + MIR SINE MIR 13 259 -3 2175 94 7 3 chr20 32704232 32704530 -39449352 + AluSq SINE Alu 1 299 -14 38 22 0 0 chr20 32704625 32704670 -39449212 + AT_rich Low_complexity Low_complexity 1 45 0 1476 92 10 0 chr20 32704670 32704877 -39449005 - AluSg/x SINE Alu -25 287 79 2213 85 14 0 chr20 32704877 32705171 -39448711 - AluSp SINE Alu -14 299 2 387 0 0 0 chr20 32705171 32705214 -39448668 + (TTTA)n Simple_repeat Simple_repeat 4 46 0 1333 90 63 11 chr20 32705214 32705403 -39448479 - AluSg/x SINE Alu -30 280 82 198 0 0 0 chr20 32705615 32705637 -39448245 + (TTG)n Simple_repeat Simple_repeat 3 24 0 915 179 0 0 chr20 32705644 32705795 -39448087 - AluJo/FRAM SINE Alu -30 282 132 416 176 49 39 chr20 32705797 32705899 -39447983 + FLAM_A SINE Alu 40 142 0 2187 104 0 0 chr20 32706472 32706761 -39447121 - AluSq SINE Alu -24 289 1 316 277 60 76 chr20 32706916 32707100 -39446782 - MLT1J LTR MaLR -203 308 128 2137 100 3 7 chr20 32707332 32707632 -39446250 - AluY SINE Alu -12 299 1 448 296 107 22 chr20 32707948 32708178 -39445704 + MIR SINE MIR 3 252 -10 2242 100 0 0 chr20 32708462 32708772 -39445110 + AluSx SINE Alu 1 310 -2 1814 109 67 0 chr20 32708815 32709099 -39444783 - AluSx SINE Alu -9 303 1 435 243 201 19 chr20 32709353 32709567 -39444315 + L1ME4a LINE L1 5615 5867 -254 2014 119 0 3 chr20 32709663 32709966 -39443916 - AluY SINE Alu -9 302 1 1050 70 0 0 chr20 32709969 32710097 -39443785 - AluSq/x SINE Alu -179 133 6 1861 109 67 0 chr20 32710216 32710499 -39443383 + AluSx SINE Alu 1 302 -10 324 282 127 50 chr20 32710813 32710870 -39443012 - L2 LINE L2 -8 3305 3254 219 36 0 0 chr20 32710870 32710898 -39442984 + (TGGA)n Simple_repeat Simple_repeat 3 30 0 324 282 127 50 chr20 32710898 32711021 -39442861 - L2 LINE L2 -59 3254 3111 30 48 0 16 chr20 32711297 32711330 -39442552 + AT_rich Low_complexity Low_complexity 1 34 -27 2105 118 0 9 chr20 32711330 32711645 -39442237 - AluSq SINE Alu -1 312 1 30 48 0 16 chr20 32711645 32711673 -39442209 + AT_rich Low_complexity Low_complexity 34 61 0 615 186 51 0 chr20 32711808 32711926 -39441956 - FLAM_C SINE Alu -9 124 1 693 211 120 6 chr20 32712652 32712827 -39441055 - L1MD2 LINE L1 -133 6226 6032 2053 113 10 3 chr20 32712838 32713138 -39440744 - AluSx SINE Alu -10 302 1 2139 106 3 10 chr20 32714105 32714416 -39439466 - AluSc SINE Alu 0 309 1 1274 178 116 29 chr20 32715101 32715376 -39438506 - AluJo SINE Alu -1 301 3 326 0 0 0 chr20 32715549 32715584 -39438298 + U2 snRNA snRNA 1 35 -153 598 188 46 30 chr20 32715698 32715905 -39437977 - L1MB7 LINE L1 0 6184 5981 2193 103 0 3 chr20 32715916 32716218 -39437664 - AluSg SINE Alu -9 301 1 3883 136 55 15 chr20 32716220 32717054 -39436828 - L1MA5 LINE L1 -394 5906 5047 2095 124 0 6 chr20 32717054 32717368 -39436514 - AluSx SINE Alu 0 312 1 3883 136 55 15 chr20 32717368 32717518 -39436364 - L1MA5 LINE L1 -1253 5047 4904 491 196 0 21 chr20 32717527 32717624 -39436258 - FLAM_C SINE Alu -12 131 37 1733 150 0 0 chr20 32717624 32717904 -39435978 - L1MA5 LINE L1 -1226 4920 4641 2288 105 0 0 chr20 32717904 32718198 -39435684 - AluSq SINE Alu -19 294 1 600 233 76 6 chr20 32718229 32718401 -39435481 - L1MEc LINE L1 -3549 2666 2483 262 0 0 50 chr20 32718403 32718443 -39435439 + (TTTAA)n Simple_repeat Simple_repeat 3 40 0 2313 99 0 3 chr20 32718456 32718749 -39435133 + AluSg SINE Alu 1 292 -18 308 288 2 9 chr20 32718750 32718856 -39435026 - L1MC4 LINE L1 -1340 6702 6614 251 294 0 33 chr20 32718777 32718869 -39435013 + L1MC4 LINE L1 6614 6702 -1340 * 1935 147 7 0 chr20 32718901 32719186 -39434696 - AluJb SINE Alu -25 287 1 581 231 192 14 chr20 32719189 32719397 -39434485 - L1MEc LINE L1 -3874 2522 2278 1089 169 0 5 chr20 32719660 32719844 -39434038 - AluJb SINE Alu 0 312 130 752 148 7 90 chr20 32719896 32720051 -39433831 + FLAM_C SINE Alu 2 143 0 586 191 0 0 chr20 32720188 32720298 -39433584 - FLAM_A SINE Alu -2 140 31 983 299 37 8 chr20 32720639 32721041 -39432841 - HAL1 LINE L1 -721 1786 1373 243 226 32 0 chr20 32721078 32721140 -39432742 - Charlie8 DNA MER1_type -1641 776 713 378 0 0 0 chr20 32721173 32721215 -39432667 + (TG)n Simple_repeat Simple_repeat 2 43 0 2369 85 3 10 chr20 32721514 32721820 -39432062 - AluSq SINE Alu -9 304 1 226 278 139 21 chr20 32721878 32722022 -39431860 - MIR SINE MIR -77 185 25 970 151 23 47 chr20 32722089 32722261 -39431621 - FRAM SINE Alu -12 164 1 1815 172 7 10 chr20 32722268 32722571 -39431311 - AluJb SINE Alu -10 302 1 225 254 0 56 chr20 32722572 32722643 -39431239 - L1MEc LINE L1 -5674 531 465 1858 168 0 7 chr20 32722654 32722951 -39430931 - AluJb SINE Alu -16 296 2 2300 60 7 33 chr20 32722962 32723263 -39430619 - AluY SINE Alu -18 293 1 582 259 92 43 chr20 32723265 32723654 -39430228 + L1P1 LINE L1 5083 5493 -662 * 634 247 39 18 chr20 32723622 32723835 -39430047 + L1ME3A LINE L1 5709 5932 -230 838 30 0 0 chr20 32723837 32723937 -39429945 + L1PA3 LINE L1 6056 6155 0 2522 52 0 20 chr20 32724037 32724342 -39429540 - AluY SINE Alu -12 299 1 1602 196 3 10 chr20 32724522 32724818 -39429064 - AluJo SINE Alu -18 294 1 23 0 0 0 chr20 32725019 32725042 -39428840 + AT_rich Low_complexity Low_complexity 1 23 0 276 292 79 75 chr20 32725693 32725998 -39427884 - MLT1J LTR MaLR -203 308 3 28 0 0 0 chr20 32726555 32726583 -39427299 + AT_rich Low_complexity Low_complexity 1 28 0 1624 171 10 48 chr20 32726583 32726738 -39427144 - AluJb SINE Alu -25 287 147 2341 110 0 0 chr20 32726738 32727039 -39426843 - AluSx SINE Alu -11 301 1 1624 171 10 48 chr20 32727039 32727175 -39426707 - AluJb SINE Alu -165 147 7 398 281 129 13 chr20 32727466 32727690 -39426192 - L1ME LINE L1 -338 5783 5534 2318 99 6 29 chr20 32727690 32727862 -39426020 - AluSx SINE Alu -7 305 142 2316 111 3 0 chr20 32727862 32728169 -39425713 - AluSx SINE Alu -4 308 1 2318 99 6 29 chr20 32728169 32728308 -39425574 - AluSx SINE Alu -170 142 1 1115 190 67 33 chr20 32728435 32728589 -39425293 - L1MA7 LINE L1 0 6291 6144 2245 107 10 0 chr20 32728589 32728887 -39424995 - AluSq SINE Alu -12 301 1 1115 190 67 33 chr20 32728887 32729032 -39424850 - L1MA7 LINE L1 -147 6144 5982 339 276 99 50 chr20 32729214 32729395 -39424487 - MIR SINE MIR -16 246 57 749 211 0 0 chr20 32729489 32729622 -39424260 - FLAM_A SINE Alu 0 133 1 2224 95 7 0 chr20 32729665 32729976 -39423906 - AluSx SINE Alu 0 312 1 2208 129 3 0 chr20 32730083 32730394 -39423488 - AluSx SINE Alu 0 312 1 2973 13 0 0 chr20 32730780 32731098 -39422784 - AluYb8 SINE Alu 0 318 1 2278 111 0 3 chr20 32731238 32731545 -39422337 - AluSq SINE Alu -7 306 1 2312 102 7 0 chr20 32732499 32732793 -39421089 - AluSq SINE Alu -17 296 1 205 290 139 23 chr20 32734358 32734617 -39419265 - L2 LINE L2 -1619 1695 1407 2056 121 0 24 chr20 32734773 32735070 -39418812 - AluSx SINE Alu -22 290 1 21 0 0 0 chr20 32735079 32735100 -39418782 + AT_rich Low_complexity Low_complexity 1 21 0 198 0 0 0 chr20 32735613 32735635 -39418247 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 1720 181 0 14 chr20 32735638 32735930 -39417952 - AluJo SINE Alu -12 300 13 2431 64 0 29 chr20 32735972 32736283 -39417599 - AluY SINE Alu -9 302 1 1955 147 10 7 chr20 32736378 32736671 -39417211 + AluJb SINE Alu 1 294 -18 1715 130 63 19 chr20 32737324 32737593 -39416289 + AluJb SINE Alu 1 281 -31 462 36 0 0 chr20 32737595 32737651 -39416231 + (CA)n Simple_repeat Simple_repeat 1 56 0 2287 112 3 0 chr20 32737957 32738269 -39415613 - AluSq SINE Alu 0 313 1 779 221 84 4 chr20 32739008 32739234 -39414648 - MIR SINE MIR -1 261 18 2374 91 0 0 chr20 32740209 32740516 -39413366 - AluSq SINE Alu -6 307 1 418 214 107 25 chr20 32740578 32740737 -39413145 + MER113 DNA MER1_type? 21 192 -329 917 214 41 37 chr20 32740744 32740987 -39412895 - MIR SINE MIR 0 262 19 1913 148 7 26 chr20 32741119 32741422 -39412460 - AluSx SINE Alu -15 297 1 343 301 98 7 chr20 32741789 32741932 -39411950 - MIR SINE MIR 0 262 107 2331 134 166 60 chr20 32742198 32742795 -39411087 - MER4A LTR ERV1 -4 660 1 2375 82 7 10 chr20 32742853 32743158 -39410724 + AluSx SINE Alu 1 304 -8 509 271 100 40 chr20 32743796 32744047 -39409835 + L2 LINE L2 3022 3287 -26 218 361 82 10 chr20 32744082 32744179 -39409703 - L2 LINE L2 -40 3232 3129 252 328 94 16 chr20 32744614 32744742 -39409140 - MIR3 SINE MIR -18 190 53 309 291 55 16 chr20 32744946 32745073 -39408809 + MARNA DNA Mariner 31 162 -424 * 646 297 104 34 chr20 32744959 32745373 -39408509 - MARNA DNA Mariner -41 545 103 348 333 91 67 chr20 32745431 32745881 -39408001 - L2 LINE L2 -3 3269 2809 2519 58 0 3 chr20 32746007 32746302 -39407580 - AluY SINE Alu -17 294 1 1541 169 110 0 chr20 32746825 32747098 -39406784 + AluJb SINE Alu 1 303 -9 870 119 8 0 chr20 32747248 32747366 -39406516 + FLAM_C SINE Alu 1 119 -24 278 316 0 0 chr20 32748903 32748982 -39404900 - MIR SINE MIR -88 120 42 903 231 14 19 chr20 32749391 32749474 -39404408 - MER58C DNA MER1_type -2205 215 133 411 21 0 0 chr20 32749474 32749522 -39404360 + (TG)n Simple_repeat Simple_repeat 2 49 0 903 231 14 19 chr20 32749522 32749533 -39404349 - MER58C DNA MER1_type -2287 133 123 2261 94 0 3 chr20 32749533 32749839 -39404043 - AluY SINE Alu 0 305 1 903 231 14 19 chr20 32749839 32749854 -39404028 - MER58C DNA MER1_type -2297 123 109 2269 112 0 0 chr20 32749854 32750148 -39403734 - AluSx SINE Alu -14 298 5 903 231 14 19 chr20 32750148 32750251 -39403631 - MER58C DNA MER1_type -2311 109 1 1230 223 99 85 chr20 32750850 32751519 -39402363 - L1MC5 LINE L1 -49 7912 7235 988 85 0 0 chr20 32751569 32751710 -39402172 - L1MA5A LINE L1 -2 6295 6155 764 22 0 0 chr20 32751741 32751832 -39402050 + L1PA4 LINE L1 6063 6153 -2 827 118 0 39 chr20 32752635 32752762 -39401120 + FLAM_C SINE Alu 3 124 -9 22 35 0 0 chr20 32753667 32753696 -39400186 + AT_rich Low_complexity Low_complexity 1 29 0 935 157 45 122 chr20 32754021 32754333 -39399549 + L1MA8 LINE L1 6003 6290 -1 2302 88 13 7 chr20 32754336 32754643 -39399239 + AluSx SINE Alu 1 309 -3 720 188 0 29 chr20 32754683 32754821 -39399061 + FLAM_C SINE Alu 1 134 -9 2452 57 0 17 chr20 32756615 32756912 -39396970 - AluY SINE Alu -19 292 1 2253 93 10 3 chr20 32757057 32757347 -39396535 - AluSx SINE Alu -20 292 1 2453 75 0 0 chr20 32757433 32757727 -39396155 - AluY SINE Alu -17 294 1 339 111 0 0 chr20 32758209 32758254 -39395628 - MER2 DNA MER2_type -300 45 1 452 158 30 40 chr20 32758265 32758366 -39395516 - L2 LINE L2 -46 3267 3168 557 254 32 55 chr20 32758396 32758616 -39395266 - L2 LINE L2 -625 2689 2475 310 145 14 87 chr20 32758884 32758953 -39394929 - L1MEc LINE L1 -6265 131 68 2130 100 38 3 chr20 32759474 32759765 -39394117 - AluSx SINE Alu -11 301 1 2033 106 42 0 chr20 32759907 32760190 -39393692 - AluSp SINE Alu -17 296 2 22 35 0 0 chr20 32760510 32760539 -39393343 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr20 32762022 32762044 -39391838 + AT_rich Low_complexity Low_complexity 1 22 0 357 186 0 0 chr20 32762472 32762542 -39391340 + (TATATG)n Simple_repeat Simple_repeat 3 72 0 2381 102 0 0 chr20 32762545 32762849 -39391033 - AluSg SINE Alu -6 304 1 2287 90 0 0 chr20 32763851 32764130 -39389752 + AluSg SINE Alu 1 279 -31 276 30 0 0 chr20 32764133 32764166 -39389716 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 204 238 48 48 chr20 32764241 32764304 -39389578 + MIR SINE MIR 82 144 -118 240 217 163 54 chr20 32764963 32765055 -39388827 + MIR3 SINE MIR 78 179 -29 240 88 0 0 chr20 32765370 32765404 -39388478 + MLT1E2 LTR MaLR 590 623 -3 1899 86 112 11 chr20 32765486 32765753 -39388129 - AluSg SINE Alu -16 294 1 929 206 27 0 chr20 32765913 32766097 -39387785 + MER5A DNA MER1_type 1 189 0 473 226 21 17 chr20 32766404 32766537 -39387345 - MIR SINE MIR -64 144 8 674 251 183 0 chr20 32767573 32767792 -39386090 + MIR SINE MIR 4 262 0 2090 130 0 32 chr20 32768015 32768330 -39385552 + AluSx SINE Alu 1 305 -7 538 262 41 41 chr20 32768376 32768548 -39385334 - MER5B DNA MER1_type 0 178 7 251 256 26 26 chr20 32768689 32768767 -39385115 - MER5A DNA MER1_type -2 187 110 2188 132 0 0 chr20 32768776 32769086 -39384796 - AluSx SINE Alu -2 310 1 1729 167 0 7 chr20 32769430 32769718 -39384164 - AluJb SINE Alu -9 303 18 202 273 327 0 chr20 32770931 32771041 -39382841 + MIR SINE MIR 2 147 -115 193 315 28 37 chr20 32771205 32771313 -39382569 + MIR SINE MIR 153 259 -3 440 270 88 49 chr20 32771396 32771600 -39382282 + MIR SINE MIR 48 259 -3 301 376 98 5 chr20 32772008 32772202 -39381680 + MIR SINE MIR 28 239 -23 608 310 90 10 chr20 32772224 32772424 -39381458 + MIR SINE MIR 47 262 0 319 283 31 44 chr20 32772708 32772934 -39380948 - L1MC4a LINE L1 -1802 6006 5784 796 166 0 43 chr20 32773078 32773217 -39380665 - FLAM_C SINE Alu 0 133 1 219 208 0 57 chr20 32774004 32774057 -39379825 + C-rich Low_complexity Low_complexity 4 53 0 811 203 0 0 chr20 32776638 32776771 -39377111 - FLAM_A SINE Alu 0 133 1 285 268 102 39 chr20 32776814 32776941 -39376941 - MIR SINE MIR -110 152 18 342 303 82 0 chr20 32779335 32779457 -39374425 - L2 LINE L2 -8 3264 3133 353 324 79 23 chr20 32779602 32779818 -39374064 - L2 LINE L2 -147 3125 2898 199 372 0 0 chr20 32779992 32780070 -39373812 + L2 LINE L2 3173 3250 -22 619 231 40 100 chr20 32780102 32780423 -39373459 - L2 LINE L2 -9 3304 3003 369 264 0 56 chr20 32780468 32780593 -39373289 + MER63 DNA MER1_type 13 756 -306 939 308 38 53 chr20 32780614 32781198 -39372684 - L2 LINE L2 -706 2608 2034 207 259 0 0 chr20 32781724 32781778 -39372104 + (TCCA)n Simple_repeat Simple_repeat 2 55 0 246 318 24 48 chr20 32781779 32781905 -39371977 - L2 LINE L2 -1 3312 3190 535 208 0 25 chr20 32782043 32782163 -39371719 - L2 LINE L2 0 3313 3197 2289 95 0 0 chr20 32782241 32782537 -39371345 - AluSx SINE Alu -16 296 1 2236 102 0 7 chr20 32782601 32782906 -39370976 - AluSx SINE Alu -9 303 1 330 273 180 0 chr20 32783159 32783287 -39370595 - L2 LINE L2 -1 3271 3121 640 268 75 26 chr20 32783543 32783808 -39370074 - L2 LINE L2 -638 2676 2399 408 293 100 50 chr20 32784271 32784510 -39369372 - MER102b DNA MER1_type -14 327 77 187 266 64 73 chr20 32784520 32784629 -39369253 - MIR3 SINE MIR -36 172 65 187 291 103 51 chr20 32784603 32784720 -39369162 - L2 LINE L2 -2 3270 3148 425 259 29 43 chr20 32784778 32784917 -39368965 + MIR SINE MIR 33 169 -93 469 259 34 34 chr20 32786124 32786271 -39367611 - MIR SINE MIR -39 223 77 1182 250 70 14 chr20 32787086 32787206 -39366676 - L2 LINE L2 -2 3311 3199 2196 112 7 0 chr20 32787206 32787509 -39366373 - AluSg SINE Alu -5 305 1 1182 250 70 14 chr20 32787509 32787604 -39366278 - L2 LINE L2 -114 3199 3111 1513 169 81 18 chr20 32787604 32787888 -39365994 - AluJo SINE Alu -10 302 1 1182 250 70 14 chr20 32787888 32788225 -39365657 - L2 LINE L2 -202 3111 2724 228 289 35 53 chr20 32789522 32789636 -39364246 + MIR SINE MIR 51 162 -100 * 346 317 10 10 chr20 32789623 32789727 -39364155 - MIR SINE MIR 0 262 159 195 42 0 0 chr20 32789727 32789751 -39364131 + (ATTG)n Simple_repeat Simple_repeat 2 25 0 604 124 0 41 chr20 32789754 32789851 -39364031 - AluSg/x SINE Alu -32 280 188 265 170 57 0 chr20 32789851 32789904 -39363978 - MIR SINE MIR -98 164 109 184 321 0 37 chr20 32789914 32789995 -39363887 + MIR SINE MIR 153 230 -32 375 277 74 1 chr20 32790001 32790123 -39363759 - MIR SINE MIR -62 146 31 613 297 95 22 chr20 32790460 32790692 -39363190 - MIR SINE MIR -1 261 13 347 204 168 0 chr20 32791166 32791279 -39362603 - MIR3 SINE MIR -72 136 5 199 189 0 0 chr20 32791259 32791296 -39362586 + MIR SINE MIR 116 152 -110 * 347 200 29 0 chr20 32791369 32791439 -39362443 - MIR SINE MIR -62 146 75 663 282 97 0 chr20 32792429 32792635 -39361247 - MIR SINE MIR -2 260 35 301 322 163 44 chr20 32792643 32793053 -39360829 - L2 LINE L2 -3 3269 2811 378 233 33 0 chr20 32793307 32793397 -39360485 + MIR SINE MIR 100 192 -70 452 261 314 12 chr20 32793436 32793777 -39360105 - L2 LINE L2 -5 3308 2865 2276 84 3 3 chr20 32793828 32794125 -39359757 - AluSx SINE Alu -15 297 1 492 330 137 17 chr20 32794171 32794522 -39359360 - L2 LINE L2 0 3313 2921 523 237 14 26 chr20 32794936 32795101 -39358781 - MIR SINE MIR -61 147 19 2162 128 0 0 chr20 32795212 32795518 -39358364 - AluSx SINE Alu -6 306 1 855 185 43 22 chr20 32795518 32795702 -39358180 - MIR SINE MIR -6 256 69 206 283 206 72 chr20 32796108 32796288 -39357594 + L3 LINE CR1 1371 1574 -3 283 265 12 0 chr20 32796561 32796644 -39357238 + MIR SINE MIR 62 145 -117 181 365 24 12 chr20 32796914 32796999 -39356883 - MIR SINE MIR -72 136 51 290 149 39 78 chr20 32800591 32800745 -39353137 + (CAGAGA)n Simple_repeat Simple_repeat 5 152 0 798 165 0 0 chr20 32800774 32801042 -39352840 + (CA)n Simple_repeat Simple_repeat 1 268 0 347 0 23 0 chr20 32801161 32801204 -39352678 + (GA)n Simple_repeat Simple_repeat 2 45 0 201 217 0 43 chr20 32801506 32801565 -39352317 + MIR SINE MIR 99 152 -110 431 297 42 17 chr20 32801848 32802020 -39351862 - MIR SINE MIR -63 145 13 340 214 63 111 chr20 32802066 32802192 -39351690 + L2 LINE L2 3193 3312 -1 567 236 163 77 chr20 32804976 32805209 -39348673 + MIR SINE MIR 9 261 -1 283 213 27 13 chr20 32805740 32805815 -39348067 - LTR45 LTR ERV1 0 525 450 211 250 42 42 chr20 32806641 32806713 -39347169 + MIR SINE MIR 60 131 -77 2220 118 0 3 chr20 32806714 32807027 -39346855 - AluSq SINE Alu -1 312 1 2324 74 7 7 chr20 32807247 32807546 -39346336 + AluSq SINE Alu 1 299 -14 241 231 0 19 chr20 32807782 32807834 -39346048 + CT-rich Low_complexity Low_complexity 1 51 0 302 288 136 23 chr20 32807836 32807968 -39345914 - L2 LINE L2 -11 3261 3115 371 354 49 12 chr20 32808041 32808205 -39345677 + L1M4 LINE L1 4927 5096 -1050 1023 127 0 48 chr20 32808216 32808381 -39345501 + AluJb SINE Alu 102 258 -54 1473 137 17 25 chr20 32808381 32808622 -39345260 - AluJb SINE Alu -73 239 1 503 284 131 0 chr20 32808628 32808811 -39345071 - L2 LINE L2 -240 3073 2867 417 300 0 31 chr20 32809012 32809142 -39344740 + MIR SINE MIR 109 234 -28 352 283 26 18 chr20 32809205 32809318 -39344564 + L2 LINE L2 3193 3306 -7 246 355 30 45 chr20 32809320 32809485 -39344397 - L2 LINE L2 -249 3023 2854 3284 205 21 23 chr20 32809485 32810139 -39343743 + MER82 DNA MER2_type 1 653 0 246 355 30 45 chr20 32810139 32810275 -39343607 - L2 LINE L2 -418 2854 2718 288 316 250 0 chr20 32810406 32810542 -39343340 - L2 LINE L2 0 3272 3103 1086 83 7 0 chr20 32810665 32810810 -39343072 - L1PB1 LINE L1 -2 6149 6004 363 309 221 27 chr20 32810810 32811829 -39342053 - L2 LINE L2 -221 3051 1827 263 297 131 23 chr20 32812005 32812042 -39341840 + L2 LINE L2 2686 2718 -554 876 130 15 0 chr20 32812042 32812173 -39341709 - FLAM_C SINE Alu 0 133 1 263 297 131 23 chr20 32812173 32812465 -39341417 + L2 LINE L2 2718 3043 -229 337 294 39 56 chr20 32813485 32813665 -39340217 - MER5A DNA MER1_type 0 189 13 577 302 68 8 chr20 32813689 32813924 -39339958 - MIR SINE MIR -12 250 2 662 128 0 0 chr20 32814374 32814468 -39339414 - AluSg/x SINE Alu -10 302 209 308 254 88 26 chr20 32814659 32814773 -39339109 + L2 LINE L2 2888 3008 -305 * 698 187 173 0 chr20 32814764 32814914 -39338968 + L2 LINE L2 3136 3311 -2 214 270 0 67 chr20 32814923 32815012 -39338870 - L3 LINE CR1 -21 1556 1474 289 287 21 0 chr20 32815274 32815368 -39338514 + MIR SINE MIR 35 130 -132 231 270 122 36 chr20 32817457 32817644 -39336238 + L2 LINE L2 2772 2968 -304 577 315 166 17 chr20 32817682 32818104 -39335778 - L2 LINE L2 0 3313 2829 483 281 20 7 chr20 32818325 32818471 -39335411 - MIR SINE MIR -58 204 57 472 280 68 5 chr20 32819163 32819375 -39334507 - MIR SINE MIR 0 262 29 288 353 17 0 chr20 32819426 32819542 -39334340 - MIR SINE MIR -98 164 47 217 294 92 18 chr20 32819799 32819908 -39333974 + MIR3 SINE MIR 84 200 -8 522 256 108 34 chr20 32820777 32820953 -39332929 - MIR3 SINE MIR -7 201 13 442 269 0 25 chr20 32821067 32821186 -39332696 - MIR SINE MIR -82 180 65 245 186 71 29 chr20 32821381 32821451 -39332431 - MIR SINE MIR -71 137 65 642 332 74 0 chr20 32821519 32821736 -39332146 + MIR SINE MIR 16 248 -14 468 301 76 36 chr20 32822102 32822351 -39331531 + L1MC4a LINE L1 5607 5865 -1943 2627 48 0 3 chr20 32822351 32822663 -39331219 - AluY SINE Alu 0 311 1 244 349 67 62 chr20 32822854 32823049 -39330833 - L2 LINE L2 -6 3266 3071 2544 80 0 0 chr20 32823186 32823498 -39330384 - AluSx SINE Alu 0 312 1 215 248 129 10 chr20 32823879 32823980 -39329902 - MIR3 SINE MIR -15 193 81 36 53 0 0 chr20 32824975 32825032 -39328850 + GC_rich Low_complexity Low_complexity 1 57 0 192 77 0 0 chr20 32825255 32825281 -39328601 + (CCG)n Simple_repeat Simple_repeat 3 28 0 337 270 0 11 chr20 32825739 32825828 -39328054 + (TCCA)n Simple_repeat Simple_repeat 4 91 0 233 288 15 0 chr20 32826005 32826071 -39327811 + MIR SINE MIR 36 102 -106 363 279 95 48 chr20 32826425 32826526 -39327356 - L2 LINE L2 -6 3307 3212 1223 150 119 17 chr20 32826526 32826820 -39327062 - MER33 DNA MER1_type 0 324 1 363 279 95 48 chr20 32826820 32826969 -39326913 - L2 LINE L2 -101 3212 2990 820 167 0 0 chr20 32826985 32827111 -39326771 + AluJb SINE Alu 1 126 -186 1631 123 39 99 chr20 32827113 32827445 -39326437 + AluJo SINE Alu 1 312 0 616 341 153 31 chr20 32827449 32827927 -39325955 - L2 LINE L2 -339 2975 2440 1895 133 39 36 chr20 32828086 32828394 -39325488 + AluJb SINE Alu 2 310 -2 1245 54 0 32 chr20 32828404 32828590 -39325292 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 266 308 0 69 chr20 32828942 32828997 -39324885 + L2 LINE L2 2701 2758 -556 2194 157 53 65 chr20 32828997 32829128 -39324754 + MLT1D LTR MaLR 1 132 -373 2325 103 7 0 chr20 32829128 32829428 -39324454 - AluSx SINE Alu -10 302 1 2194 157 53 65 chr20 32829428 32829807 -39324075 + MLT1D LTR MaLR 132 505 0 266 308 0 69 chr20 32829807 32829881 -39324001 + L2 LINE L2 2758 2821 -493 455 274 41 14 chr20 32829887 32830033 -39323849 + MIR SINE MIR 86 235 -27 183 184 0 0 chr20 32830034 32830072 -39323810 + (TTA)n Simple_repeat Simple_repeat 3 40 0 263 81 0 0 chr20 32830606 32830643 -39323239 - tRNA-Asp-GAC tRNA tRNA -38 37 1 360 283 46 64 chr20 32830742 32830883 -39322999 - L1MC4a LINE L1 -1884 5924 5789 2302 104 7 3 chr20 32830883 32831181 -39322701 + AluSq SINE Alu 1 299 -14 360 283 46 64 chr20 32831181 32831322 -39322560 - L1MC4a LINE L1 -2019 5789 5647 378 252 173 0 chr20 32831394 32831521 -39322361 - L1MC4a LINE L1 -523 5641 5493 480 246 65 85 chr20 32831686 32831908 -39321974 - L1MC4a LINE L1 -753 5393 5179 1970 82 16 0 chr20 32831908 32832151 -39321731 - AluSc SINE Alu -62 247 1 480 246 65 85 chr20 32832151 32832269 -39321613 - L1MC4a LINE L1 -967 5179 5060 370 206 108 0 chr20 32832565 32832667 -39321215 - L1MC4a LINE L1 -1578 4568 4456 372 306 27 0 chr20 32832667 32832778 -39321104 + L2 LINE L2 3187 3300 -13 373 281 146 42 chr20 32832786 32832978 -39320904 - L1MC4a LINE L1 -1700 4446 4235 243 167 0 21 chr20 32833011 32833059 -39320823 - MLT1L LTR MaLR -568 47 1 256 335 62 78 chr20 32833121 32833491 -39320391 + LTR67 LTR ERVL 186 549 -8 626 228 28 0 chr20 32833589 32833734 -39320148 - L1ME2 LINE L1 -25 6139 5991 2343 100 0 0 chr20 32833759 32834058 -39319824 + AluSg SINE Alu 1 299 -11 236 211 155 0 chr20 32834058 32834129 -39319753 + L1MC/D LINE L1 5432 5513 -729 264 59 0 0 chr20 32834977 32835011 -39318871 + (TCCA)n Simple_repeat Simple_repeat 2 35 0 273 274 88 9 chr20 32835015 32835128 -39318754 - L2 LINE L2 0 3272 3151 199 279 16 16 chr20 32835122 32835183 -39318699 - MIR3 SINE MIR -52 156 96 * 2476 55 14 0 chr20 32835215 32835505 -39318377 - AluSc SINE Alu -15 294 1 1509 181 22 50 chr20 32835562 32835882 -39318000 - AluJo SINE Alu -1 311 1 187 363 186 0 chr20 32835981 32836105 -39317777 + L2 LINE L2 3117 3263 -9 * 334 287 85 24 chr20 32836092 32836256 -39317626 + L2 LINE L2 2412 2585 -729 901 132 0 0 chr20 32836321 32836450 -39317432 - AluJb SINE Alu -9 303 175 485 270 106 95 chr20 32837449 32837912 -39315970 + L1MEd LINE L1 2 469 -5650 2204 133 7 0 chr20 32837912 32838213 -39315669 - AluSg SINE Alu -6 304 2 3142 225 59 21 chr20 32838463 32838854 -39315028 + L1M4 LINE L1 3943 4318 -1828 1424 177 156 91 chr20 32838854 32838937 -39314945 - MLT1D LTR MaLR 0 505 429 2318 94 0 3 chr20 32838937 32839245 -39314637 - AluSx SINE Alu 0 307 1 1424 177 156 91 chr20 32839245 32839634 -39314248 - MLT1D LTR MaLR -76 429 1 3142 225 59 21 chr20 32839634 32840208 -39313674 + L1M4 LINE L1 4318 4945 -1201 1630 239 90 62 chr20 32840406 32840983 -39312899 + MLT1E LTR MaLR 1 593 0 2135 114 4 0 chr20 32841256 32841557 -39312325 + AluSx SINE Alu 1 302 0 201 231 0 0 chr20 32841999 32842038 -39311844 + CT-rich Low_complexity Low_complexity 4 42 0 1016 245 24 23 chr20 32842078 32842338 -39311544 - MIR SINE MIR 0 262 5 489 34 0 0 chr20 32842565 32842624 -39311258 + (TTCTC)n Simple_repeat Simple_repeat 4 62 0 2193 101 4 0 chr20 32842626 32842902 -39310980 - AluSp SINE Alu -36 277 1 291 136 0 0 chr20 32843141 32843185 -39310697 - MSTB LTR MaLR 0 426 383 1388 86 0 0 chr20 32843185 32843359 -39310523 - AluSq SINE Alu -8 305 132 2497 119 43 0 chr20 32843359 32843730 -39310152 - MSTB LTR MaLR -39 387 1 252 0 0 0 chr20 32843757 32843785 -39310097 + (CA)n Simple_repeat Simple_repeat 1 28 0 474 275 80 56 chr20 32843845 32843986 -39309896 - MLT1J LTR MaLR -18 493 357 1753 134 17 60 chr20 32843986 32844146 -39309736 - AluJb SINE Alu -14 298 155 2263 96 17 0 chr20 32844146 32844438 -39309444 - AluSg SINE Alu -13 297 1 1753 134 17 60 chr20 32844438 32844575 -39309307 - AluJb SINE Alu -157 155 14 474 275 80 56 chr20 32844575 32844691 -39309191 - MLT1J LTR MaLR -154 357 245 1033 88 17 4 chr20 32844691 32844930 -39308952 + (TTTC)n Simple_repeat Simple_repeat 1 242 0 474 275 80 56 chr20 32844930 32845043 -39308839 - MLT1J LTR MaLR -266 245 111 244 273 97 40 chr20 32845049 32845225 -39308657 - L1ME3A LINE L1 -242 5928 5743 1347 281 38 15 chr20 32845229 32845703 -39308179 - LTR16C LTR ERVL -6 485 1 324 310 142 22 chr20 32845735 32845967 -39307915 - L1ME3A LINE L1 -467 5703 5444 341 269 36 18 chr20 32845974 32846141 -39307741 - L1ME LINE L1 -571 5595 5426 986 142 0 0 chr20 32846217 32846358 -39307524 - FLAM_C SINE Alu -2 141 1 1486 185 33 49 chr20 32846388 32846518 -39307364 - Charlie1 DNA MER1_type 0 2761 2630 2247 109 0 0 chr20 32846518 32846821 -39307061 - AluSx SINE Alu 0 303 1 1486 185 33 49 chr20 32846821 32846897 -39306985 - Charlie1 DNA MER1_type -131 2630 2554 2114 113 34 0 chr20 32846897 32847188 -39306694 - AluSx SINE Alu -11 301 1 1486 185 33 49 chr20 32847188 32847405 -39306477 - Charlie1 DNA MER1_type -207 2554 2343 2393 259 60 57 chr20 32847472 32848001 -39305881 - L1MEc LINE L1 -4331 2390 1864 2365 117 0 0 chr20 32848001 32848309 -39305573 - AluSx SINE Alu -4 308 1 2393 259 60 57 chr20 32848309 32848814 -39305068 - L1MEc LINE L1 -4857 1864 1349 2055 141 21 0 chr20 32848814 32849105 -39304777 - AluJb SINE Alu -4 308 12 2393 259 60 57 chr20 32849105 32849345 -39304537 - L1MEc LINE L1 -5372 1349 1111 350 227 0 10 chr20 32849379 32849476 -39304406 + (CATA)n Simple_repeat Simple_repeat 3 98 0 352 119 0 0 chr20 32849677 32849736 -39304146 - FLAM SINE Alu -1 132 74 1553 238 6 58 chr20 32849749 32850245 -39303637 - MER65B LTR ERV1 -8 523 54 1256 126 0 0 chr20 32850246 32850421 -39303461 - AluSx SINE Alu -3 307 133 457 139 51 0 chr20 32850421 32850500 -39303382 + MLT1D LTR MaLR 309 391 -114 2116 110 0 0 chr20 32850523 32850858 -39303024 - AluSx SINE Alu 0 335 1 1029 98 0 0 chr20 32850863 32850996 -39302886 - AluSx SINE Alu -179 133 1 356 125 31 16 chr20 32850996 32851060 -39302822 - MER65B LTR ERV1 -466 65 1 3115 234 42 15 chr20 32851060 32851239 -39302643 - L1M4 LINE L1 -2101 4045 3872 2214 126 7 0 chr20 32851239 32851548 -39302334 - AluSx SINE Alu -1 311 1 3115 234 42 15 chr20 32851548 32852245 -39301637 - L1M4 LINE L1 -2274 3872 3145 2891 194 62 2 chr20 32852242 32852875 -39301007 - L1MEc LINE L1 -5842 698 28 * 269 222 111 10 chr20 32852899 32852998 -39300884 + MIR SINE MIR 154 262 0 412 197 247 28 chr20 32853402 32853580 -39300302 - MIR SINE MIR -11 251 35 1062 241 65 70 chr20 32853790 32854066 -39299816 - MLT1J LTR MaLR -2 509 233 2144 149 0 13 chr20 32854066 32854382 -39299500 + AluJo SINE Alu 1 312 0 1062 241 65 70 chr20 32854382 32854486 -39299396 - MLT1J LTR MaLR -278 233 130 2441 68 14 0 chr20 32854486 32854778 -39299104 - AluY SINE Alu -15 296 1 1062 241 65 70 chr20 32854778 32854885 -39298997 - MLT1J LTR MaLR -381 130 23 644 280 42 5 chr20 32854942 32855135 -39298747 - MIR SINE MIR -34 228 29 856 166 7 0 chr20 32855972 32856117 -39297765 + U1 snRNA snRNA 1 146 -19 498 325 104 35 chr20 32856246 32856731 -39297151 + L2 LINE L2 2764 3272 0 1241 132 62 126 chr20 32856775 32857100 -39296782 - L1MB7 LINE L1 -62 6122 5819 1015 92 0 0 chr20 32857100 32857241 -39296641 - AluY SINE Alu -13 298 158 2450 186 65 12 chr20 32857241 32857569 -39296313 - L1MB7 LINE L1 -362 5822 5513 1668 190 0 21 chr20 32857569 32857884 -39295998 - AluJb SINE Alu 0 313 5 2450 186 65 12 chr20 32857884 32858394 -39295488 - L1MB7 LINE L1 -671 5513 4942 3054 189 53 33 chr20 32858414 32859066 -39294816 - L1MC4a LINE L1 0 7808 7136 2211 139 0 0 chr20 32859066 32859376 -39294506 - AluJb SINE Alu -2 310 1 3054 189 53 33 chr20 32859376 32859516 -39294366 - L1MC4a LINE L1 -672 7136 7000 191 224 194 0 chr20 32859572 32859639 -39294243 - MIR SINE MIR -66 142 63 2191 117 0 13 chr20 32859794 32860093 -39293789 - AluSx SINE Alu -17 295 1 2523 90 3 0 chr20 32860470 32860782 -39293100 + AluSp SINE Alu 1 313 0 650 253 97 2 chr20 32860832 32861093 -39292789 - MLT1G LTR MaLR 0 590 325 1970 164 3 3 chr20 32861369 32861668 -39292214 - AluSx SINE Alu -13 299 1 301 329 76 19 chr20 32861668 32861818 -39292064 + L1MC4a LINE L1 5737 5898 -1910 993 210 54 9 chr20 32861844 32862068 -39291814 + MIR SINE MIR 21 254 -8 2358 90 7 0 chr20 32862158 32862459 -39291423 + AluSq SINE Alu 1 303 -10 325 231 67 0 chr20 32862971 32863075 -39290807 - Charlie8 DNA MER1_type -2143 274 164 520 204 25 111 chr20 32863817 32863844 -39290038 + MIR SINE MIR 3 31 -231 2377 89 0 29 chr20 32863844 32864160 -39289722 - AluSg SINE Alu -3 307 1 520 204 25 111 chr20 32864160 32864294 -39289588 + MIR SINE MIR 31 150 -112 270 286 48 0 chr20 32864773 32864857 -39289025 + L2 LINE L2 3226 3313 0 274 289 89 0 chr20 32864907 32864997 -39288885 - MIR SINE MIR -48 214 117 466 242 121 8 chr20 32865003 32865135 -39288747 - L2 LINE L2 0 3313 3167 788 245 134 9 chr20 32865237 32865453 -39288429 + MIR SINE MIR 19 261 -1 370 301 70 32 chr20 32865470 32865610 -39288272 - L2 LINE L2 -249 3023 2875 2351 113 0 3 chr20 32865610 32865920 -39287962 + AluSx SINE Alu 1 309 -3 370 301 70 32 chr20 32865920 32865935 -39287947 - L2 LINE L2 -397 2875 2862 450 36 0 0 chr20 32866538 32866594 -39287288 + (TG)n Simple_repeat Simple_repeat 2 57 0 550 273 6 48 chr20 32866666 32866831 -39287051 + MIR SINE MIR 46 203 -59 467 176 59 0 chr20 32867014 32867116 -39286766 - MER5A DNA MER1_type -77 112 5 845 141 81 60 chr20 32867128 32867259 -39286623 - MER5A DNA MER1_type 0 189 62 1818 151 101 50 chr20 32867259 32867297 -39286585 - MLT2C1 LTR ERVL 0 397 362 585 64 0 0 chr20 32867297 32867375 -39286507 + (TG)n Simple_repeat Simple_repeat 2 79 0 1818 151 101 50 chr20 32867375 32867595 -39286287 - MLT2C1 LTR ERVL -35 362 112 1897 148 7 7 chr20 32867595 32867885 -39285997 + AluJo SINE Alu 1 290 -22 1818 151 101 50 chr20 32867885 32868003 -39285879 - MLT2C1 LTR ERVL -285 112 1 845 141 81 60 chr20 32868003 32868056 -39285826 - MER5A DNA MER1_type -127 62 1 241 258 0 0 chr20 32868928 32868994 -39284888 - MLT1L LTR MaLR -6 609 544 * 521 217 6 75 chr20 32868991 32869072 -39284810 - Charlie4a DNA MER1_type -1453 508 442 459 235 10 0 chr20 32869072 32869174 -39284708 - L1MA10 LINE L1 0 6334 6232 521 217 6 75 chr20 32869174 32869253 -39284629 - Charlie4a DNA MER1_type -1519 442 359 756 262 138 12 chr20 32869254 32869666 -39284216 - LTR16B LTR ERVL 0 464 1 1019 218 45 0 chr20 32869672 32869915 -39283967 - Charlie4a DNA MER1_type -152 356 103 2352 98 0 3 chr20 32869918 32870224 -39283658 + AluY SINE Alu 1 305 -6 586 306 35 35 chr20 32870355 32870554 -39283328 + MIR SINE MIR 58 256 -6 1437 257 159 16 chr20 32870595 32871112 -39282770 - MLT1G1 LTR MaLR 0 595 5 896 251 61 78 chr20 32871237 32871648 -39282234 - MLT1L LTR MaLR -44 571 168 2064 230 115 35 chr20 32871799 32872463 -39281419 - L1ME3A LINE L1 -9 6161 5552 4320 84 28 16 chr20 32872463 32873036 -39280846 - LTR19B LTR ERV1 0 580 1 2064 230 115 35 chr20 32873036 32873083 -39280799 - L1ME3A LINE L1 -618 5552 5510 1503 203 9 44 chr20 32873083 32873398 -39280484 - AluJb SINE Alu -4 308 5 2064 230 115 35 chr20 32873398 32873459 -39280423 - L1ME3A LINE L1 -660 5510 5326 343 248 319 0 chr20 32873569 32873682 -39280200 - MER91A DNA MER1_type -47 149 1 360 284 31 132 chr20 32873726 32874181 -39279701 + L3 LINE CR1 1168 1576 -1 687 208 188 43 chr20 32874779 32874941 -39278941 + MIR SINE MIR 22 222 -40 288 120 0 0 chr20 32874941 32874991 -39278891 + (CA)n Simple_repeat Simple_repeat 2 51 0 687 208 188 43 chr20 32874991 32875035 -39278847 + MIR SINE MIR 222 258 -4 321 260 0 0 chr20 32875166 32875239 -39278643 + MIR SINE MIR 51 123 -139 759 239 19 10 chr20 32875758 32875900 -39277982 + MER3 DNA MER1_type 1 140 -69 6729 38 8 1 chr20 32875900 32876700 -39277182 + L1PA5 LINE L1 5346 6150 -4 2244 109 14 0 chr20 32876705 32876998 -39276884 + AluSx SINE Alu 1 297 -15 1998 140 28 11 chr20 32876998 32877354 -39276528 - L1MB3 LINE L1 -9 6174 5813 759 239 19 10 chr20 32877354 32877409 -39276473 + MER3 DNA MER1_type 142 207 -2 1002 272 12 19 chr20 32877410 32877667 -39276215 + MIR SINE MIR 8 262 0 518 276 214 24 chr20 32878019 32878356 -39275526 - L2 LINE L2 0 3313 2913 588 273 253 17 chr20 32878470 32879133 -39274749 + L2 LINE L2 2084 2903 -411 1951 142 27 0 chr20 32879300 32879595 -39274287 - AluJo SINE Alu -9 303 1 335 234 202 0 chr20 32879615 32879709 -39274173 + L2 LINE L2 3201 3313 0 1097 221 49 0 chr20 32880021 32880247 -39273635 - MIR SINE MIR -11 251 15 262 299 26 0 chr20 32880297 32880374 -39273508 - L2 LINE L2 -37 3235 3157 196 348 0 14 chr20 32880483 32880552 -39273330 - L2 LINE L2 -342 2972 2905 254 322 148 0 chr20 32880750 32880865 -39273017 - L2 LINE L2 0 3272 3141 1230 232 105 47 chr20 32881069 32881534 -39272348 + L1MC4a LINE L1 5439 5930 -1878 1718 161 16 46 chr20 32881542 32881847 -39272035 + AluJo SINE Alu 1 296 -16 2240 133 3 0 chr20 32881918 32882227 -39271655 + AluSx SINE Alu 1 310 -2 360 200 0 0 chr20 32882786 32882856 -39271026 + MIR SINE MIR 186 255 -7 466 290 54 78 chr20 32883244 32883574 -39270308 + L1MC4a LINE L1 5643 5982 -139 1487 156 14 83 chr20 32883626 32883914 -39269968 - AluJo SINE Alu -44 268 1 310 281 137 29 chr20 32884069 32884514 -39269368 - L1ME4a LINE L1 -11 6110 5618 2312 116 3 0 chr20 32884567 32884870 -39269012 + AluSx SINE Alu 3 306 -6 293 212 24 11 chr20 32884966 32885056 -39268826 + L1MC4 LINE L1 7904 8042 0 2081 120 3 0 chr20 32885791 32886075 -39267807 - AluJo SINE Alu -5 307 23 1414 161 5 0 chr20 32886075 32886293 -39267589 - AluJb SINE Alu -93 219 1 1603 173 114 1 chr20 32886293 32886775 -39267107 - L1ME4a LINE L1 -684 5500 4979 914 142 0 0 chr20 32886775 32886902 -39266980 + AluJb SINE Alu 1 127 -185 2284 115 0 0 chr20 32886908 32887204 -39266678 + AluSx SINE Alu 1 296 -16 2048 120 31 0 chr20 32887436 32887728 -39266154 + AluSq SINE Alu 3 303 -10 289 211 0 0 chr20 32887803 32887855 -39266027 + MIR SINE MIR 99 150 -112 360 331 114 6 chr20 32887955 32888121 -39265761 - L3 LINE CR1 -13 1564 1381 470 298 31 25 chr20 32888232 32888393 -39265489 - MIR SINE MIR -73 189 28 829 168 13 0 chr20 32888697 32888846 -39265036 - Zaphod DNA AcHobo 0 4031 3881 458 282 93 1 chr20 32888916 32889218 -39264664 - MER115 DNA AcHobo -153 540 171 285 228 13 13 chr20 32889250 32889329 -39264553 - MER115 DNA AcHobo -614 79 1 750 211 34 72 chr20 32889649 32889857 -39264025 + MIR SINE MIR 30 229 -33 198 338 38 0 chr20 32890100 32890180 -39263702 - MIR SINE MIR -78 130 48 284 231 13 13 chr20 32890559 32890637 -39263245 + MER115 DNA AcHobo 1 78 -615 304 245 64 11 chr20 32890692 32890786 -39263096 + MIR SINE MIR 99 197 -65 322 155 42 28 chr20 32890821 32890892 -39262990 + MIR3 SINE MIR 88 159 -49 256 299 30 45 chr20 32890894 32891028 -39262854 + Charlie8 DNA MER1_type 2 133 -2284 800 167 0 22 chr20 32891066 32891204 -39262678 + FRAM SINE Alu 25 159 -17 568 234 13 7 chr20 32891208 32891362 -39262520 + Charlie8 DNA MER1_type 126 280 -2137 2413 82 0 7 chr20 32891542 32891836 -39262046 + AluSq SINE Alu 11 302 -11 839 137 0 43 chr20 32891844 32891983 -39261899 + FLAM_C SINE Alu 1 133 0 235 290 19 37 chr20 32892302 32892409 -39261473 - MIR3 SINE MIR -14 194 90 469 269 128 6 chr20 32892479 32892635 -39261247 + MIR SINE MIR 72 246 -16 246 229 94 31 chr20 32892676 32892772 -39261110 - MLT1K LTR MaLR -92 496 395 505 112 0 41 chr20 32892772 32892870 -39261012 + (TCTCCC)n Simple_repeat Simple_repeat 4 97 0 826 251 94 30 chr20 32892877 32893144 -39260738 - MLT1K LTR MaLR -303 285 2 598 277 34 0 chr20 32893161 32893309 -39260573 - L2 LINE L2 -4 3268 3116 2287 116 3 0 chr20 32893314 32893625 -39260257 + AluSx SINE Alu 1 312 0 377 167 141 0 chr20 32894069 32894147 -39259735 + MIR SINE MIR 38 126 -136 349 240 226 18 chr20 32894175 32894396 -39259486 - L1ME4a LINE L1 -3 6118 5852 409 273 148 27 chr20 32894445 32894628 -39259254 - MIR SINE MIR -56 206 2 700 252 77 29 chr20 32894641 32894915 -39258967 - L1ME4a LINE L1 -289 5832 5546 260 215 159 0 chr20 32894975 32895082 -39258800 - L1ME4a LINE L1 -687 5434 5311 475 202 246 0 chr20 32895137 32895251 -39258631 - MER5A DNA MER1_type -8 181 40 704 248 143 80 chr20 32895252 32895655 -39258227 - MLT1H LTR MaLR -2 547 98 2518 42 13 7 chr20 32895655 32895963 -39257919 + AluY SINE Alu 2 311 0 704 248 143 80 chr20 32895963 32896066 -39257816 - MLT1H LTR MaLR -451 98 3 672 145 184 13 chr20 32896120 32896272 -39257610 - MER5B DNA MER1_type 0 178 1 1351 122 13 84 chr20 32896272 32896510 -39257372 - AluJo SINE Alu -7 305 85 235 188 21 0 chr20 32896910 32896958 -39256924 - L2 LINE L2 0 3272 3224 220 241 69 0 chr20 32897159 32897217 -39256665 - MIR SINE MIR -6 256 195 233 263 18 0 chr20 32897244 32897301 -39256581 + MIR SINE MIR 2 59 -203 347 299 50 70 chr20 32897412 32897588 -39256294 - MIR SINE MIR -68 140 12 316 277 219 8 chr20 32899220 32899339 -39254543 - L1MC4a LINE L1 -1881 5927 5784 366 294 62 12 chr20 32899350 32899510 -39254372 + Charlie8 DNA MER1_type 58 225 -2192 202 143 0 0 chr20 32899677 32899712 -39254170 - L2 LINE L2 0 3313 3279 2055 121 17 17 chr20 32902326 32902624 -39251258 + AluSx SINE Alu 1 298 -14 417 161 11 23 chr20 32902912 32902999 -39250883 + MLT1J LTR MaLR 95 180 -331 262 282 48 32 chr20 32903150 32903274 -39250608 + MLT1J LTR MaLR 384 509 -2 191 293 151 38 chr20 32903277 32903383 -39250499 - MIR SINE MIR -38 224 107 1261 254 91 59 chr20 32903619 32904008 -39249874 - L2 LINE L2 -4 3309 2886 2173 117 0 0 chr20 32904008 32904318 -39249564 + AluSx SINE Alu 1 310 0 1261 254 91 59 chr20 32904318 32904480 -39249402 - L2 LINE L2 -427 2886 2731 186 250 0 0 chr20 32905365 32905401 -39248481 - MER5A DNA MER1_type -8 181 146 493 254 214 32 chr20 32905581 32905801 -39248081 + MIR SINE MIR 3 262 0 678 272 186 3 chr20 32905847 32906159 -39247723 + L2 LINE L2 2388 2756 -558 650 223 64 13 chr20 32906937 32907094 -39246788 - L2 LINE L2 -17 3296 3132 1846 146 0 30 chr20 32907261 32907562 -39246320 + AluJb SINE Alu 1 292 -20 191 372 0 0 chr20 32907777 32907855 -39246027 - MIR3 SINE MIR -21 187 110 293 220 129 8 chr20 32907870 32908002 -39245880 - L2 LINE L2 -304 3009 2862 239 287 98 25 chr20 32908135 32908257 -39245625 - MIR SINE MIR -55 207 77 786 172 41 237 chr20 32908842 32909021 -39244861 - L2 LINE L2 -3 3310 3276 1901 163 3 28 chr20 32909021 32909340 -39244542 + AluJo SINE Alu 1 311 -1 786 172 41 237 chr20 32909340 32909624 -39244258 - L2 LINE L2 -37 3276 2938 346 283 20 0 chr20 32909910 32910009 -39243873 - L2 LINE L2 -673 2641 2541 242 305 121 59 chr20 32910007 32910263 -39243619 + L2 LINE L2 2926 3197 -75 * 1369 242 22 62 chr20 32910291 32910420 -39243462 + L2 LINE L2 2881 3014 -299 2207 132 0 10 chr20 32910420 32910724 -39243158 - AluSx SINE Alu -11 301 1 1369 242 22 62 chr20 32910724 32911045 -39242837 + L2 LINE L2 3014 3313 0 290 260 99 50 chr20 32911086 32911267 -39242615 - L2 LINE L2 -473 2841 2652 273 278 63 13 chr20 32911628 32911778 -39242104 - MIR SINE MIR -70 192 35 1547 163 103 0 chr20 32912254 32912506 -39241376 + AluJb SINE Alu 7 284 -28 509 56 44 0 chr20 32912506 32912596 -39241286 + (TA)n Simple_repeat Simple_repeat 2 95 0 2219 113 10 0 chr20 32912901 32913202 -39240680 + AluSx SINE Alu 1 304 -8 274 197 120 86 chr20 32913220 32913337 -39240545 + L1ME LINE L1 5578 5698 -472 1690 140 0 0 chr20 32913337 32913572 -39240310 - AluSx SINE Alu -77 235 1 2145 137 3 13 chr20 32913879 32914194 -39239688 - AluJo SINE Alu 0 312 1 280 176 54 40 chr20 32914333 32914407 -39239475 - L1MC/D LINE L1 -2035 5773 5699 222 277 0 0 chr20 32914880 32914927 -39238955 + polypyrimidine Low_complexity Low_complexity 3 49 0 452 285 61 131 chr20 32915087 32915515 -39238367 - L2 LINE L2 -34 3238 2841 419 208 177 0 chr20 32915568 32915664 -39238218 - L2 LINE L2 0 3313 3201 672 190 58 75 chr20 32915679 32915853 -39238029 - MIR SINE MIR 0 262 92 891 295 107 24 chr20 32915902 32916285 -39237597 + L1MC4a LINE L1 5515 5929 -1879 221 128 21 0 chr20 32916315 32916362 -39237520 + GA-rich Low_complexity Low_complexity 1 48 0 480 266 84 13 chr20 32916595 32916749 -39237133 - MIR3 SINE MIR -39 169 5 * 1025 268 160 14 chr20 32916745 32917389 -39236493 - L2 LINE L2 -23 3290 2558 271 329 0 0 chr20 32917383 32917468 -39236414 + MIR3 SINE MIR 121 205 -3 * 752 284 44 0 chr20 32917895 32918120 -39235762 + Charlie8 DNA MER1_type 3 237 -2180 558 268 216 9 chr20 32918124 32918550 -39235332 - L1MC4a LINE L1 -1639 6169 5656 1614 157 47 8 chr20 32918689 32918944 -39234938 + AluJo SINE Alu 1 265 -47 345 159 0 102 chr20 32919036 32919124 -39234758 + MIR3 SINE MIR 110 188 -20 184 319 43 11 chr20 32919287 32919381 -39234501 - L3 LINE CR1 -12 1565 1469 370 253 235 12 chr20 32919449 32919611 -39234271 + MIR SINE MIR 50 247 -15 1757 195 20 0 chr20 32919681 32919979 -39233903 - AluJb SINE Alu -8 304 1 231 114 0 0 chr20 32919998 32920033 -39233849 + (TTCA)n Simple_repeat Simple_repeat 1 35 0 314 283 131 56 chr20 32920040 32920238 -39233644 - L2 LINE L2 -17 3296 3084 387 235 76 25 chr20 32920336 32920455 -39233427 - MIR SINE MIR -65 197 73 2449 91 0 0 chr20 32920477 32920785 -39233097 - AluSg SINE Alu -2 308 1 230 286 0 29 chr20 32921449 32921519 -39232363 + C-rich Low_complexity Low_complexity 1 68 0 621 268 81 0 chr20 32921536 32921745 -39232137 + MIR SINE MIR 30 255 -7 381 336 120 6 chr20 32921827 32922160 -39231722 + L2 LINE L2 2593 2963 -351 23 0 0 0 chr20 32922733 32922756 -39231126 + GC_rich Low_complexity Low_complexity 1 23 0 227 103 26 0 chr20 32922777 32922816 -39231066 + GA-rich Low_complexity Low_complexity 1 40 0 54 40 0 0 chr20 32922972 32923047 -39230835 + GC_rich Low_complexity Low_complexity 1 75 0 339 269 0 13 chr20 32924349 32924427 -39229455 + MIR SINE MIR 73 149 -59 184 305 95 11 chr20 32924663 32924758 -39229124 + MIR SINE MIR 34 136 -126 639 294 35 28 chr20 32925508 32925763 -39228119 - MIR SINE MIR -4 258 2 408 312 51 13 chr20 32925951 32926108 -39227774 + MIR3 SINE MIR 39 201 -7 409 269 171 52 chr20 32926480 32926766 -39227116 - Charlie8 DNA MER1_type -1010 1407 1 207 344 41 25 chr20 32926874 32926996 -39226886 - MIR SINE MIR -17 245 122 531 285 91 22 chr20 32927636 32927884 -39225998 + MIR SINE MIR 2 262 0 1291 251 26 59 chr20 32928013 32928631 -39225251 - L2 LINE L2 -2 3311 2668 2237 97 0 3 chr20 32928631 32928940 -39224942 + AluSc SINE Alu 1 308 -1 1291 251 26 59 chr20 32928940 32929046 -39224836 - L2 LINE L2 -645 2668 2560 626 273 101 18 chr20 32929119 32929346 -39224536 + MIR SINE MIR 12 257 -5 234 315 34 0 chr20 32930177 32930266 -39223616 + L2 LINE L2 2996 3087 -226 833 249 35 10 chr20 32930679 32930880 -39223002 + MIR SINE MIR 57 262 0 477 294 98 0 chr20 32930873 32931016 -39222866 - MIR SINE MIR -105 157 1 * 2368 78 0 0 chr20 32931097 32931403 -39222479 - AluSx SINE Alu -6 306 1 184 237 0 0 chr20 32931927 32931965 -39221917 + MIR SINE MIR 218 255 -7 244 241 37 0 chr20 32931994 32932048 -39221834 + MIR SINE MIR 89 144 -64 538 246 96 18 chr20 32932138 32932305 -39221577 + MIR SINE MIR 72 251 -11 536 293 135 19 chr20 32932423 32932689 -39221193 + L3 LINE CR1 1281 1577 0 1931 138 7 13 chr20 32932817 32933122 -39220760 - AluJb SINE Alu -3 309 7 370 188 89 20 chr20 32933160 32933261 -39220621 - L1MC5 LINE L1 -47 7914 7807 763 186 77 66 chr20 32933264 32933447 -39220435 + MER3 DNA MER1_type 1 185 -24 329 196 168 63 chr20 32933483 32933572 -39220310 - L1MC5 LINE L1 -157 7804 7726 2378 81 0 0 chr20 32933572 32933868 -39220014 + AluSx SINE Alu 2 297 -15 329 196 168 63 chr20 32933868 32933921 -39219961 - L1MC5 LINE L1 -235 7726 7647 889 234 0 0 chr20 32933921 32934105 -39219777 - FRAM SINE Alu 0 176 1 480 283 152 0 chr20 32934176 32934367 -39219515 + MER102b DNA MER1_type 119 338 -3 303 310 0 10 chr20 32934600 32934700 -39219182 - MIR SINE MIR -63 145 47 180 0 0 0 chr20 32934850 32934870 -39219012 + (A)n Simple_repeat Simple_repeat 1 20 0 235 338 0 0 chr20 32935217 32935288 -39218594 + MIR SINE MIR 35 105 -157 468 318 105 56 chr20 32935312 32935498 -39218384 + L2 LINE L2 2578 2754 -559 1920 148 0 10 chr20 32935498 32935801 -39218081 + AluJo SINE Alu 1 300 -12 1664 171 3 34 chr20 32935802 32936124 -39217758 + AluSx SINE Alu 1 312 0 2097 110 0 0 chr20 32936128 32936449 -39217433 + AluSx SINE Alu 1 321 0 468 318 105 56 chr20 32936449 32936957 -39216925 + L2 LINE L2 2756 3299 -14 2153 107 7 3 chr20 32936957 32937256 -39216626 + AluSx SINE Alu 1 300 -12 468 318 105 56 chr20 32937256 32937272 -39216610 + L2 LINE L2 3299 3313 0 262 250 70 30 chr20 32937283 32937383 -39216499 + MIR SINE MIR 103 206 -56 362 350 153 10 chr20 32937610 32937813 -39216069 - MIR SINE MIR -23 239 8 713 276 154 29 chr20 32937877 32938383 -39215499 - L2 LINE L2 0 3313 2872 2090 106 0 3 chr20 32938383 32938698 -39215184 + AluSx SINE Alu 1 314 0 1853 125 35 3 chr20 32938707 32938994 -39214888 + AluSx SINE Alu 1 296 -16 713 276 154 29 chr20 32938994 32939174 -39214708 - L2 LINE L2 -447 2866 2534 620 296 28 7 chr20 32939561 32939786 -39214096 + MIR SINE MIR 35 261 -1 208 363 0 0 chr20 32940340 32940486 -39213396 + (CAGA)n Simple_repeat Simple_repeat 4 149 0 270 0 0 0 chr20 32940500 32940530 -39213352 + (CAGA)n Simple_repeat Simple_repeat 4 33 0 234 0 0 0 chr20 32940591 32940617 -39213265 + (CAGA)n Simple_repeat Simple_repeat 4 29 0 254 95 40 40 chr20 32940678 32940752 -39213130 + (CAGA)n Simple_repeat Simple_repeat 4 77 0 198 0 0 0 chr20 32940854 32940876 -39213006 + (CAGA)n Simple_repeat Simple_repeat 4 25 0 337 241 17 40 chr20 32940986 32941215 -39212667 + (CAGA)n Simple_repeat Simple_repeat 1 223 0 353 282 11 11 chr20 32941230 32941404 -39212478 + (CAGA)n Simple_repeat Simple_repeat 4 177 0 213 132 0 0 chr20 32941502 32941540 -39212342 + (CAGA)n Simple_repeat Simple_repeat 4 41 0 198 0 0 0 chr20 32941594 32941616 -39212266 + (CAGA)n Simple_repeat Simple_repeat 4 25 0 226 270 0 47 chr20 32941642 32941790 -39212092 + (CAGA)n Simple_repeat Simple_repeat 4 144 0 228 308 0 27 chr20 32941958 32942104 -39211778 + (CAGA)n Simple_repeat Simple_repeat 4 145 0 222 200 0 0 chr20 32943335 32943375 -39210507 + MIR SINE MIR 117 156 -106 1168 250 127 29 chr20 32943633 32944335 -39209547 - L2 LINE L2 0 3313 2540 1872 155 3 0 chr20 32944335 32944631 -39209251 - AluJo SINE Alu -15 297 1 1168 250 127 29 chr20 32944631 32944648 -39209234 - L2 LINE L2 -773 2540 2526 321 26 0 0 chr20 32944895 32944933 -39208949 + (TG)n Simple_repeat Simple_repeat 1 38 0 757 164 0 0 chr20 32944933 32945049 -39208833 - FLAM_C SINE Alu -17 116 1 339 222 12 0 chr20 32945079 32945160 -39208722 - MIR SINE MIR -77 131 50 218 241 19 0 chr20 32945233 32945287 -39208595 - MIR SINE MIR -115 147 93 308 344 119 19 chr20 32946221 32946554 -39207328 + L2 LINE L2 2658 3022 -250 2160 89 4 0 chr20 32946554 32946876 -39207006 + AluSp SINE Alu 1 323 0 211 273 0 0 chr20 32946973 32947028 -39206854 + L2 LINE L2 3218 3272 0 220 370 19 9 chr20 32947072 32947180 -39206702 + L3 LINE CR1 1328 1436 -141 301 319 22 0 chr20 32947479 32947570 -39206312 - MIR3 SINE MIR -7 201 109 381 43 0 0 chr20 32947807 32947854 -39206028 + (CA)n Simple_repeat Simple_repeat 1 47 0 351 298 84 0 chr20 32948119 32948250 -39205632 - MIR3 SINE MIR -46 162 21 523 329 80 78 chr20 32948331 32948781 -39205101 - L2 LINE L2 -1 3271 2821 637 250 14 0 chr20 32949003 32949147 -39204735 + MIR SINE MIR 2 147 -115 1617 163 42 17 chr20 32949149 32949438 -39204444 + AluJo SINE Alu 1 296 -16 318 259 82 15 chr20 32949565 32949700 -39204182 - MIR SINE MIR -26 236 93 334 289 35 9 chr20 32953864 32953978 -39199904 - MIR3 SINE MIR -7 201 85 355 246 45 20 chr20 32954376 32954520 -39199362 - MIR SINE MIR -14 248 101 263 253 33 22 chr20 32955186 32955277 -39198605 - MIR SINE MIR -59 149 58 455 211 53 53 chr20 32957581 32957714 -39196168 - MIR3 SINE MIR -36 172 40 180 0 0 0 chr20 32957979 32957999 -39195883 + (AGGGGG)n Simple_repeat Simple_repeat 5 24 0 265 310 89 51 chr20 32958278 32958436 -39195446 - MIR3 SINE MIR -9 199 36 468 194 37 9 chr20 32958440 32958548 -39195334 - L2 LINE L2 -11 3302 3192 324 217 116 65 chr20 32958604 32958742 -39195140 - MER5A DNA MER1_type 0 189 45 1829 163 3 10 chr20 32958811 32959124 -39194758 - AluJo SINE Alu -1 311 1 279 338 0 0 chr20 32959150 32959230 -39194652 + L2 LINE L2 2706 2785 -529 377 298 72 34 chr20 32959344 32959490 -39194392 + MLT1L LTR MaLR 7 165 -450 852 209 99 0 chr20 32959490 32959662 -39194220 + MER5A DNA MER1_type 1 189 0 377 298 72 34 chr20 32959662 32959723 -39194159 + MLT1L LTR MaLR 165 222 -393 978 240 208 5 chr20 32959723 32960102 -39193780 + MLT1J LTR MaLR 1 456 -55 2168 113 8 80 chr20 32960307 32960427 -39193455 - MLT1B LTR MaLR -6 384 257 4352 82 5 0 chr20 32960427 32960978 -39192904 - MER41A LTR ERV1 0 554 1 2168 113 8 80 chr20 32960978 32961092 -39192790 - MLT1B LTR MaLR -133 257 136 1979 124 7 0 chr20 32961092 32961382 -39192500 - AluSx SINE Alu -1 311 20 2168 113 8 80 chr20 32961382 32961546 -39192336 - MLT1B LTR MaLR -254 136 14 466 242 70 0 chr20 32961577 32961705 -39192177 + MLT1L LTR MaLR 462 598 -17 536 258 49 18 chr20 32961911 32962074 -39191808 - MER117 DNA MER1_type -23 174 7 424 313 0 9 chr20 32962173 32962285 -39191597 - MIR SINE MIR -70 192 82 275 303 98 0 chr20 32962475 32962597 -39191285 - MIR3 SINE MIR -51 157 24 545 0 0 0 chr20 32963094 32963156 -39190726 + 5S rRNA rRNA 29 90 -31 278 221 0 96 chr20 32963156 32963260 -39190622 - MIR SINE MIR -76 132 39 401 274 129 35 chr20 32963318 32963519 -39190363 + MIR SINE MIR 4 223 -39 2345 128 19 72 chr20 32963577 32964047 -39189835 + MER65A LTR ERV1 1 445 0 2232 110 0 0 chr20 32964099 32964407 -39189475 - AluSx SINE Alu -4 308 1 801 249 93 0 chr20 32964407 32964612 -39189270 - MIR SINE MIR -15 247 24 298 269 48 84 chr20 32964683 32964850 -39189032 - MIR SINE MIR -50 212 52 224 260 0 0 chr20 32965945 32965995 -39187887 - L2 LINE L2 -1 3312 3263 2001 96 41 0 chr20 32966041 32966339 -39187543 + AluSx SINE Alu 1 309 0 279 269 117 23 chr20 32966376 32966596 -39187286 - L2 LINE L2 -233 3039 2801 240 133 22 0 chr20 32966770 32966815 -39187067 + L2 LINE L2 2936 2981 -332 574 216 24 24 chr20 32966869 32966994 -39186888 - MER5A DNA MER1_type -4 185 61 1133 160 15 15 chr20 32966994 32967194 -39186688 + AluJo SINE Alu 1 200 -112 320 132 103 0 chr20 32967203 32967271 -39186611 - MER5A DNA MER1_type -114 75 1 525 214 6 89 chr20 32967281 32967449 -39186433 + MER5A DNA MER1_type 4 157 -32 296 250 135 0 chr20 32967437 32967533 -39186349 + L2 LINE L2 3164 3272 0 * 186 329 0 0 chr20 32967543 32967613 -39186269 + L2 LINE L2 3158 3227 -86 458 222 5 162 chr20 32967664 32967747 -39186135 - MER5B DNA MER1_type 0 178 138 1790 164 3 3 chr20 32967747 32968039 -39185843 + AluJo SINE Alu 13 304 -8 458 222 5 162 chr20 32968039 32968140 -39185742 - MER5B DNA MER1_type -40 138 23 1725 163 7 33 chr20 32968161 32968468 -39185414 - AluJb SINE Alu -13 299 1 907 178 46 0 chr20 32968524 32968698 -39185184 - MER5A DNA MER1_type -7 182 1 280 117 17 17 chr20 32968920 32968980 -39184902 + (TA)n Simple_repeat Simple_repeat 1 60 0 2095 105 0 20 chr20 32968980 32969284 -39184598 - AluSx SINE Alu -14 298 1 564 296 103 0 chr20 32969367 32969580 -39184302 + MIR SINE MIR 14 248 -14 197 206 185 43 chr20 32969906 32969998 -39183884 + MIR SINE MIR 42 146 -62 2539 128 82 5 chr20 32970064 32970477 -39183405 - MER65A LTR ERV1 0 445 1 2135 116 0 7 chr20 32970575 32970876 -39183006 - AluSx SINE Alu -12 300 2 687 140 27 176 chr20 32970939 32971083 -39182799 + MER53 DNA DNA 1 102 -87 1972 94 3 42 chr20 32971083 32971369 -39182513 + AluSg SINE Alu 1 275 -35 687 140 27 176 chr20 32971369 32971446 -39182436 + MER53 DNA DNA 102 189 0 294 136 0 102 chr20 32971560 32971584 -39182298 + AluSg/x SINE Alu 116 133 -167 2161 108 14 0 chr20 32971584 32971870 -39182012 + AluSx SINE Alu 1 290 -22 410 269 274 24 chr20 32972186 32972394 -39181488 + MIR SINE MIR 2 261 -1 507 71 35 0 chr20 32972888 32972973 -39180909 + (CGGGGG)n Simple_repeat Simple_repeat 4 91 0 28 48 0 0 chr20 32973819 32973861 -39180021 + GC_rich Low_complexity Low_complexity 1 42 0 221 57 29 0 chr20 32973938 32973973 -39179909 + (CGG)n Simple_repeat Simple_repeat 3 38 0 626 297 95 22 chr20 32974426 32974658 -39179224 - MIR SINE MIR -2 260 12 205 238 0 0 chr20 32974696 32974738 -39179144 + C-rich Low_complexity Low_complexity 5 46 0 425 303 25 0 chr20 32974751 32974873 -39179009 - L2 LINE L2 -1 3271 3147 198 250 0 0 chr20 32974942 32974982 -39178900 - L2 LINE L2 -69 3244 3205 1540 218 266 31 chr20 32975014 32975439 -39178443 + L2 LINE L2 1973 2297 -1017 1811 107 76 0 chr20 32975439 32975701 -39178181 + AluSx SINE Alu 18 299 -13 1540 218 266 31 chr20 32975701 32975949 -39177933 + L2 LINE L2 2297 2804 -510 194 310 17 0 chr20 32976054 32976112 -39177770 + L2 LINE L2 3214 3272 0 1661 135 50 8 chr20 32976115 32976374 -39177508 + AluJb SINE Alu 24 293 -19 399 280 28 19 chr20 32976442 32976549 -39177333 + MIR SINE MIR 30 137 -71 210 304 32 0 chr20 32977020 32977134 -39176748 + MIR SINE MIR 76 193 -69 2357 102 0 16 chr20 32977674 32977988 -39175894 - AluSg1 SINE Alu 0 309 1 224 262 0 0 chr20 32978238 32978280 -39175602 - L2 LINE L2 -15 3257 3216 367 289 21 10 chr20 32978297 32978394 -39175488 + L2 LINE L2 3174 3271 -1 2302 90 3 16 chr20 32978439 32978751 -39175131 - AluSc SINE Alu -1 308 1 609 214 8 8 chr20 32978754 32978871 -39175011 - MIR SINE MIR -115 147 31 477 228 57 70 chr20 32979094 32979252 -39174630 - L2 LINE L2 0 3313 3158 2332 107 0 0 chr20 32979263 32979561 -39174321 + AluSq SINE Alu 1 298 -15 728 175 9 22 chr20 32979756 32979979 -39173903 + CT-rich Low_complexity Low_complexity 1 220 0 1766 171 20 0 chr20 32979981 32980274 -39173608 - AluJb SINE Alu -2 310 12 240 329 57 32 chr20 32980330 32980488 -39173394 - MIR SINE MIR -55 207 46 622 249 176 54 chr20 32980939 32981292 -39172590 - MLT1J LTR MaLR -11 500 105 2137 142 0 0 chr20 32981312 32981615 -39172267 + AluSx SINE Alu 1 303 -9 838 136 0 0 chr20 32981619 32981737 -39172145 + FLAM_C SINE Alu 1 118 -15 258 32 0 0 chr20 32981740 32981771 -39172111 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 576 159 0 0 chr20 32981813 32981901 -39171981 + MER81 DNA DNA 1 88 -26 796 244 98 9 chr20 32982181 32982406 -39171476 - MIR SINE MIR -14 248 4 876 241 89 121 chr20 32982483 32982876 -39171006 - L2 LINE L2 -5 3308 2933 2102 126 17 3 chr20 32982876 32983170 -39170712 + AluSx SINE Alu 3 300 -12 876 241 89 121 chr20 32983170 32983309 -39170573 - L2 LINE L2 -380 2933 2791 474 282 60 60 chr20 32983300 32983601 -39170281 - L2 LINE L2 -165 3107 2807 * 200 348 109 22 chr20 32983856 32984040 -39169842 - L2 LINE L2 -354 2960 2761 * 937 265 22 9 chr20 32984027 32984257 -39169625 - MIR SINE MIR -12 250 18 517 200 35 9 chr20 32984783 32984898 -39168984 - MIR SINE MIR -72 190 73 508 236 157 39 chr20 32984934 32985233 -39168649 - MIR SINE MIR 0 262 25 211 200 0 0 chr20 32985244 32985274 -39168608 + (TAA)n Simple_repeat Simple_repeat 3 35 -12 1779 89 13 0 chr20 32985274 32985499 -39168383 + AluSx SINE Alu 1 228 -84 211 200 0 0 chr20 32985499 32985513 -39168369 + (TAA)n Simple_repeat Simple_repeat 34 47 0 294 188 43 0 chr20 32985572 32985641 -39168241 - MIR SINE MIR -143 119 48 354 281 93 22 chr20 32986743 32986882 -39167000 + MIR SINE MIR 105 253 -9 821 196 27 0 chr20 32987676 32987824 -39166058 - FRAM SINE Alu -24 152 1 628 324 75 16 chr20 32987888 32988458 -39165424 - L1P4 LINE L1 -351 5810 5197 843 173 62 34 chr20 32988477 32988587 -39165295 - MER5A DNA MER1_type -5 184 66 1879 108 90 11 chr20 32988587 32988864 -39165018 - AluSx SINE Alu -13 299 1 843 173 62 34 chr20 32988864 32988932 -39164950 - MER5A DNA MER1_type -123 66 1 461 266 104 26 chr20 32988987 32989141 -39164741 - MIR SINE MIR -96 166 1 611 322 106 14 chr20 32989887 32990235 -39163647 - L2 LINE L2 -2 3270 2891 520 261 90 63 chr20 32990252 32990474 -39163408 + MIR SINE MIR 23 250 -12 1538 149 38 8 chr20 32990627 32990923 -39162959 - AluJo SINE Alu 0 318 15 231 36 0 0 chr20 32991204 32991232 -39162650 + (TTCA)n Simple_repeat Simple_repeat 2 29 0 184 107 0 0 chr20 32991257 32991285 -39162597 - L2 LINE L2 -95 3218 3191 2007 245 55 28 chr20 32991717 32992427 -39161455 + L1MC4a LINE L1 5210 5403 -743 450 53 0 0 chr20 32992705 32992762 -39161120 + (CA)n Simple_repeat Simple_repeat 2 58 0 1002 170 34 24 chr20 32992814 32993020 -39160862 + MLT1F1 LTR MaLR 299 506 -61 773 162 0 0 chr20 32993021 32993138 -39160744 + FLAM_C SINE Alu 2 118 -25 323 143 18 0 chr20 32993198 32993254 -39160628 + MLT1F1 LTR MaLR 511 567 0 202 0 0 83 chr20 32993265 32993301 -39160581 + (TTTTTG)n Simple_repeat Simple_repeat 2 34 0 1698 181 6 35 chr20 32993307 32993621 -39160261 - AluJo SINE Alu -5 307 3 257 247 43 75 chr20 32993742 32993835 -39160047 - L2 LINE L2 0 3313 3224 704 149 0 0 chr20 32993842 32993949 -39159933 + FLAM_A SINE Alu 20 126 -16 340 235 73 15 chr20 32993980 32994116 -39159766 + L1ME2 LINE L1 6011 6154 -10 1648 83 0 0 chr20 32994453 32994669 -39159213 + L1PA8 LINE L1 5957 6172 0 285 231 111 26 chr20 32994936 32995053 -39158829 - MIR3 SINE MIR -80 128 2 511 324 80 77 chr20 32995559 32995703 -39158179 + L2 LINE L2 2870 3012 -260 2066 122 31 0 chr20 32995703 32995990 -39157892 - AluSx SINE Alu -16 296 1 511 324 80 77 chr20 32995990 32996246 -39157636 + L2 LINE L2 3012 3271 -1 309 240 150 20 chr20 32996254 32996354 -39157528 + MIR SINE MIR 50 162 -100 * 352 248 62 56 chr20 32996353 32996514 -39157368 - L2 LINE L2 -104 3209 3048 409 234 36 36 chr20 32996965 32997076 -39156806 + MIR SINE MIR 8 118 -144 266 234 181 0 chr20 32997134 32997228 -39156654 - MIR SINE MIR -85 177 67 313 358 8 22 chr20 32997536 32997670 -39156212 - L1MC4a LINE L1 -1866 5942 5811 4493 164 36 14 chr20 32997679 32997888 -39155994 - L1MB8 LINE L1 -12 6166 5963 800 170 0 30 chr20 32997888 32998023 -39155859 - FLAM_A SINE Alu -2 131 1 4493 164 36 14 chr20 32998023 32998928 -39154954 - L1MB8 LINE L1 -215 5963 5030 1179 161 16 5 chr20 32998928 32999120 -39154762 + AluSg/x SINE Alu 86 279 -33 360 0 0 0 chr20 32999120 32999160 -39154722 + (CA)n Simple_repeat Simple_repeat 1 40 0 2896 163 73 51 chr20 32999160 32999856 -39154026 - L1MB8 LINE L1 -1107 5039 4325 1606 98 0 0 chr20 32999856 33000061 -39153821 - AluSq SINE Alu -20 293 89 2896 163 73 51 chr20 33000061 33000087 -39153795 - L1MB8 LINE L1 -1821 4325 4301 336 259 58 13 chr20 33000069 33000251 -39153631 - L1ME LINE L1 -275 5846 5656 * 1510 265 32 38 chr20 33000277 33000454 -39153428 + L2 LINE L2 2569 2746 -567 2152 118 10 3 chr20 33000454 33000751 -39153131 + AluSx SINE Alu 1 299 -13 1510 265 32 38 chr20 33000751 33001323 -39152559 + L2 LINE L2 2746 3313 0 507 299 142 0 chr20 33001324 33001521 -39152361 + L2 LINE L2 2716 2940 -374 308 200 44 67 chr20 33001526 33001596 -39152286 - MLT1F LTR MaLR 0 542 436 2423 101 0 0 chr20 33001596 33001904 -39151978 + AluSx SINE Alu 1 308 -4 308 200 44 67 chr20 33001904 33001923 -39151959 - MLT1F LTR MaLR -106 436 418 294 324 59 22 chr20 33002029 33002165 -39151717 + L2 LINE L2 3171 3311 -2 270 295 126 11 chr20 33002158 33002253 -39151629 - MIR SINE MIR -72 136 31 * 599 239 99 50 chr20 33002512 33002713 -39151169 - MIR SINE MIR -17 245 35 2313 104 13 0 chr20 33002746 33003055 -39150827 - AluSq SINE Alu 0 313 1 3112 187 41 21 chr20 33003228 33003337 -39150545 + L1ME1 LINE L1 5469 5574 -592 1874 164 10 0 chr20 33003337 33003641 -39150241 + AluJo SINE Alu 1 307 -5 3112 187 41 21 chr20 33003641 33004210 -39149672 + L1ME1 LINE L1 5574 6161 -5 1463 209 62 3 chr20 33004454 33004779 -39149103 + LTR16C LTR ERVL 147 490 -1 310 328 33 0 chr20 33004915 33005037 -39148845 + L1ME LINE L1 5682 5807 -355 782 186 0 0 chr20 33005174 33005292 -39148590 + FLAM_C SINE Alu 1 118 -15 729 186 8 0 chr20 33005306 33005424 -39148458 + 5S rRNA rRNA 1 119 -2 1121 136 21 5 chr20 33005513 33005704 -39148178 + MER20 DNA MER1_type 26 219 0 206 312 52 13 chr20 33005758 33005835 -39148047 - L2 LINE L2 -711 2603 2524 22 0 0 0 chr20 33007515 33007537 -39146345 + AT_rich Low_complexity Low_complexity 1 22 0 201 236 91 0 chr20 33007794 33007849 -39146033 + MIR SINE MIR 89 148 -114 473 265 22 65 chr20 33007948 33008074 -39145808 + MIR SINE MIR 76 193 -69 2464 88 0 0 chr20 33008074 33008380 -39145502 + AluSx SINE Alu 1 306 -6 473 265 22 65 chr20 33008380 33008438 -39145444 + MIR SINE MIR 193 252 -10 831 166 89 0 chr20 33008469 33008638 -39145244 - MER5A DNA MER1_type -5 184 1 1282 83 0 6 chr20 33009057 33009225 -39144657 + AluSp SINE Alu 147 313 0 2407 43 0 0 chr20 33009245 33009543 -39144339 + AluY SINE Alu 3 300 0 317 383 43 14 chr20 33009657 33009866 -39144016 - L1MC/D LINE L1 -1972 5836 5622 380 253 55 25 chr20 33010128 33010330 -39143552 - L1ME4a LINE L1 -153 5968 5761 3284 163 35 58 chr20 33010372 33010950 -39142932 - L1MB5 LINE L1 -1 6173 5614 2468 54 0 10 chr20 33010950 33011248 -39142634 + AluY SINE Alu 1 295 -16 3284 163 35 58 chr20 33011248 33011406 -39142476 - L1MB5 LINE L1 -560 5614 5454 336 291 58 10 chr20 33011524 33011627 -39142255 + L2 LINE L2 3186 3293 -20 508 250 66 55 chr20 33011729 33011985 -39141897 + MER102b DNA MER1_type 81 339 -2 2061 148 3 0 chr20 33012037 33012335 -39141547 + AluJb SINE Alu 1 299 -13 344 180 0 0 chr20 33012335 33012396 -39141486 - MIR SINE MIR -79 129 69 320 311 12 9 chr20 33012819 33012955 -39140927 + MIR SINE MIR 7 141 -67 2237 95 10 3 chr20 33012968 33013263 -39140619 + AluSq SINE Alu 1 297 -16 375 23 0 0 chr20 33013324 33013368 -39140514 + (CA)n Simple_repeat Simple_repeat 2 45 0 1936 211 68 23 chr20 33013387 33013857 -39140025 - LTR16C LTR ERVL 0 491 1 523 178 22 35 chr20 33013998 33014230 -39139652 + CT-rich Low_complexity Low_complexity 1 229 0 1916 141 30 30 chr20 33014230 33014534 -39139348 - AluJo SINE Alu -8 304 1 225 200 50 17 chr20 33014787 33014847 -39139035 - Charlie8 DNA MER1_type -2162 255 194 2155 117 0 66 chr20 33014928 33015261 -39138621 - AluSx SINE Alu -1 311 1 960 229 76 113 chr20 33015456 33015691 -39138191 - LTR16B LTR ERVL -5 459 250 2516 84 0 0 chr20 33015691 33016000 -39137882 - AluSg SINE Alu -1 309 1 960 229 76 113 chr20 33016000 33016240 -39137642 - LTR16B LTR ERVL -214 250 2 707 247 93 48 chr20 33016248 33016655 -39137227 - L2 LINE L2 -173 3140 2714 2419 90 0 0 chr20 33016655 33016956 -39136926 - AluSx SINE Alu -9 303 3 707 247 93 48 chr20 33016956 33016983 -39136899 - L2 LINE L2 -599 2714 2690 223 286 24 37 chr20 33016973 33017065 -39136817 - MIR SINE MIR -130 78 3 * 280 260 167 10 chr20 33017772 33017868 -39136014 + MIR SINE MIR 34 144 -64 1690 182 25 3 chr20 33017981 33018267 -39135615 - AluJo SINE Alu -20 292 1 324 242 113 24 chr20 33018464 33018588 -39135294 - MLT1K LTR MaLR 0 588 454 705 295 22 37 chr20 33018645 33018711 -39135171 - MLT1K LTR MaLR -317 271 206 2317 81 37 3 chr20 33018711 33019008 -39134874 - AluSx SINE Alu -1 311 5 705 295 22 37 chr20 33019008 33019209 -39134673 - MLT1K LTR MaLR -382 206 8 594 288 6 6 chr20 33019216 33019376 -39134506 - MIR3 SINE MIR -39 169 10 565 259 7 22 chr20 33019789 33019924 -39133958 - MIR SINE MIR -60 148 16 451 275 25 8 chr20 33019930 33020050 -39133832 - MER5A DNA MER1_type -2 187 66 1858 255 39 26 chr20 33020053 33020622 -39133260 - MLT1K LTR MaLR -3 585 10 383 215 239 31 chr20 33020657 33020787 -39133095 - MER5A DNA MER1_type -29 160 4 2298 113 7 3 chr20 33021022 33021331 -39132551 - AluSx SINE Alu -2 310 1 1094 121 65 23 chr20 33021937 33022152 -39131730 - L1MB3 LINE L1 -7 6176 5953 189 0 0 0 chr20 33022250 33022271 -39131611 + (T)n Simple_repeat Simple_repeat 1 21 0 224 302 0 47 chr20 33022333 33022419 -39131463 - L2 LINE L2 0 3313 3232 882 194 79 2 chr20 33022434 33022692 -39131190 + MER33 DNA MER1_type 1 253 -71 259 99 42 70 chr20 33022718 33022733 -39131149 + A-rich Low_complexity Low_complexity 1 15 -54 2227 106 0 22 chr20 33022733 33023053 -39130829 + AluSp SINE Alu 1 313 0 259 99 42 70 chr20 33023053 33023108 -39130774 + A-rich Low_complexity Low_complexity 15 69 0 180 0 0 0 chr20 33023127 33023147 -39130735 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 1600 148 29 81 chr20 33023362 33023672 -39130210 + AluJb SINE Alu 1 294 -18 300 300 118 0 chr20 33023845 33023955 -39129927 - MIR SINE MIR -10 252 130 194 184 0 0 chr20 33024112 33024150 -39129732 - MIR SINE MIR -89 119 82 1168 275 108 26 chr20 33024798 33025542 -39128340 + L2 LINE L2 2493 3313 0 494 155 0 47 chr20 33025576 33025724 -39128158 + GA-rich Low_complexity Low_complexity 2 142 0 325 238 24 0 chr20 33027008 33027092 -39126790 - MIR SINE MIR -11 251 166 1141 138 11 16 chr20 33027120 33027309 -39126573 + AluJo SINE Alu 122 309 -3 2002 104 82 0 chr20 33027561 33027840 -39126042 + AluSg SINE Alu 1 302 -8 184 378 63 0 chr20 33027858 33027985 -39125897 + MIR3 SINE MIR 62 196 -12 474 286 169 48 chr20 33029484 33029840 -39124042 + L2 LINE L2 2910 3308 -5 2022 137 0 32 chr20 33029908 33030221 -39123661 - AluJb SINE Alu -9 303 1 249 277 119 0 chr20 33030231 33030332 -39123550 - L2 LINE L2 -1 3271 3159 524 15 15 0 chr20 33030401 33030466 -39123416 + (TCCA)n Simple_repeat Simple_repeat 1 66 0 2097 107 7 20 chr20 33030759 33031057 -39122825 + AluSx SINE Alu 1 294 -18 431 203 209 38 chr20 33031346 33031504 -39122378 - MER5A DNA MER1_type -4 185 1 2187 121 7 0 chr20 33031522 33031827 -39122055 + AluSx SINE Alu 1 307 -5 279 0 0 0 chr20 33032230 33032261 -39121621 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 2236 79 11 0 chr20 33032263 33032540 -39121342 - AluSp SINE Alu -31 282 3 329 294 123 16 chr20 33032543 33032730 -39121152 - L1MC/D LINE L1 -1983 5825 5619 2359 54 0 37 chr20 33032742 33033063 -39120819 - AluY SINE Alu 0 310 1 891 232 0 37 chr20 33033151 33033293 -39120589 + MIR SINE MIR 2 137 -125 2342 115 0 0 chr20 33033293 33033598 -39120284 + AluSx SINE Alu 1 305 -7 891 232 0 37 chr20 33033598 33033645 -39120237 + MIR SINE MIR 137 184 -78 355 292 9 24 chr20 33033649 33033772 -39120110 - MIR SINE MIR -59 149 45 589 299 140 0 chr20 33033976 33034183 -39119699 + MER69 DNA AcHobo 1 236 -2290 295 202 21 75 chr20 33034191 33034285 -39119597 + MER69 DNA AcHobo 2436 2524 -2 2259 99 0 10 chr20 33034888 33035215 -39118667 - AluSc SINE Alu 0 309 1 1545 172 3 65 chr20 33035217 33035507 -39118375 - AluJb SINE Alu -17 295 24 1530 184 0 4 chr20 33035564 33035825 -39118057 + AluJo SINE Alu 41 300 -12 900 190 41 36 chr20 33036760 33036955 -39116927 + MIR SINE MIR 10 205 -57 414 182 129 77 chr20 33037018 33037078 -39116804 - MIR SINE MIR -20 242 187 2174 123 0 0 chr20 33037078 33037378 -39116504 + AluSx SINE Alu 1 300 -12 414 182 129 77 chr20 33037378 33037487 -39116395 - MIR SINE MIR -75 187 64 538 114 0 0 chr20 33037536 33037615 -39116267 + MADE1 DNA Mariner 2 80 0 2458 176 86 2 chr20 33037619 33038085 -39115797 - MLT1D LTR MaLR 0 505 1 686 222 51 40 chr20 33038253 33038503 -39115379 - MIR SINE MIR -1 261 3 194 121 61 0 chr20 33039650 33039683 -39114199 - L2 LINE L2 -24 3248 3214 2052 133 0 10 chr20 33039949 33040258 -39113624 + AluSg SINE Alu 1 306 -4 433 319 56 19 chr20 33040381 33040714 -39113168 - L2 LINE L2 -228 3044 2699 2294 67 0 0 chr20 33040720 33041026 -39112856 - AluY SINE Alu 0 317 12 474 269 23 63 chr20 33041038 33041213 -39112669 - MIR SINE MIR -74 188 21 1523 168 60 47 chr20 33042020 33042173 -39111709 - AluJo SINE Alu 0 302 153 189 74 0 0 chr20 33042173 33042200 -39111682 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1429 172 49 49 chr20 33042200 33042364 -39111518 - AluJo SINE Alu -27 285 119 2333 91 0 3 chr20 33042364 33042660 -39111222 - AluY SINE Alu -16 295 1 1429 172 49 49 chr20 33042660 33042780 -39111102 - AluJo SINE Alu -192 120 1 1523 168 60 47 chr20 33042780 33042923 -39110959 - AluJo SINE Alu -148 154 1 296 44 0 22 chr20 33043206 33043251 -39110631 - MADE1 DNA Mariner -1 79 36 464 209 104 0 chr20 33043576 33043691 -39110191 - MLT1H1 LTR MaLR -7 548 422 262 129 48 48 chr20 33044019 33044081 -39109801 - MIR SINE MIR -100 162 101 386 317 41 0 chr20 33044109 33044232 -39109650 - L2 LINE L2 -24 3289 3162 621 263 88 29 chr20 33044481 33044686 -39109196 - L2 LINE L2 -194 3078 2862 204 224 52 17 chr20 33045307 33045365 -39108517 + MIR3 SINE MIR 147 206 -2 304 296 102 10 chr20 33045532 33045630 -39108252 + MIR SINE MIR 30 136 -72 504 280 171 19 chr20 33045655 33045866 -39108016 - MIR SINE MIR -19 243 1 501 300 12 25 chr20 33046013 33046173 -39107709 + MIR SINE MIR 12 169 -93 1411 188 70 44 chr20 33046426 33046724 -39107158 + AluJo SINE Alu 5 310 -2 191 306 0 0 chr20 33047030 33047079 -39106803 + MIR SINE MIR 125 173 -89 947 281 78 11 chr20 33047235 33047656 -39106226 + L2 LINE L2 2656 3112 -201 2305 117 0 0 chr20 33047656 33047963 -39105919 - AluSx SINE Alu -5 307 1 947 281 78 11 chr20 33047963 33047995 -39105887 + L2 LINE L2 3112 3140 -173 414 100 0 0 chr20 33048209 33048269 -39105613 + (TG)n Simple_repeat Simple_repeat 2 61 0 653 234 35 74 chr20 33048998 33049116 -39104766 + L1ME3 LINE L1 5703 5824 -340 1609 181 3 28 chr20 33049116 33049403 -39104479 + AluJo SINE Alu 1 280 -32 1301 67 0 6 chr20 33049404 33049582 -39104300 + (GAAA)n Simple_repeat Simple_repeat 2 178 0 653 234 35 74 chr20 33049582 33049717 -39104165 + L1ME3 LINE L1 5823 5948 -216 * 2029 158 62 62 chr20 33049712 33049980 -39103902 + L1MB8 LINE L1 5680 5950 -228 2297 102 7 3 chr20 33049980 33050275 -39103607 - AluSx SINE Alu -16 296 1 2029 158 62 62 chr20 33050275 33050505 -39103377 + L1MB8 LINE L1 5949 6178 0 250 245 0 0 chr20 33050508 33050561 -39103321 + L1ME3 LINE L1 5937 5989 -173 2079 126 0 0 chr20 33050576 33050903 -39102979 - AluSx SINE Alu 0 332 6 2493 79 0 10 chr20 33050935 33051240 -39102642 + AluSg SINE Alu 1 302 -8 1742 182 0 0 chr20 33051240 33051514 -39102368 - AluJo SINE Alu -31 281 7 594 269 5 16 chr20 33051524 33051710 -39102172 + L1ME3 LINE L1 5979 6162 0 2037 158 0 0 chr20 33051716 33052013 -39101869 + AluJo SINE Alu 1 297 -15 2388 89 0 6 chr20 33052016 33052329 -39101553 + AluY SINE Alu 1 311 0 246 116 0 0 chr20 33052433 33052476 -39101406 + (CA)n Simple_repeat Simple_repeat 2 44 0 306 316 0 0 chr20 33052476 33052590 -39101292 + L1M4 LINE L1 2703 2816 -3330 1597 162 46 46 chr20 33052614 33052739 -39101143 + AluJo SINE Alu 2 126 -186 1816 132 64 0 chr20 33052739 33053049 -39100833 - AluSx SINE Alu 0 327 1 1597 162 46 46 chr20 33053049 33053225 -39100657 + AluJo SINE Alu 125 304 -8 978 267 53 53 chr20 33053902 33054069 -39099813 + L2 LINE L2 2322 2488 -826 2613 68 0 0 chr20 33054069 33054376 -39099506 - AluSx SINE Alu -5 307 1 978 267 53 53 chr20 33054376 33054620 -39099262 + L2 LINE L2 2487 2733 -581 1797 174 0 26 chr20 33054621 33054926 -39098956 - AluJo SINE Alu -15 297 1 454 278 224 31 chr20 33054976 33055400 -39098482 - L2 LINE L2 -600 2714 2209 295 250 54 35 chr20 33055704 33055888 -39097994 - MLT1L LTR MaLR -249 366 113 262 217 0 84 chr20 33056354 33056437 -39097445 + MIR3 SINE MIR 118 193 -15 943 190 0 6 chr20 33056695 33056858 -39097024 + FRAM SINE Alu 2 163 -3 925 218 98 37 chr20 33056941 33057021 -39096861 - MLT1D LTR MaLR 0 626 552 2148 117 3 0 chr20 33057021 33057303 -39096579 + AluSx SINE Alu 1 283 -29 237 65 0 0 chr20 33057303 33057334 -39096548 + (CATA)n Simple_repeat Simple_repeat 2 32 0 925 218 98 37 chr20 33057334 33057366 -39096516 - MLT1D LTR MaLR -74 552 523 240 35 0 0 chr20 33057366 33057395 -39096487 + (CAAT)n Simple_repeat Simple_repeat 4 32 0 925 218 98 37 chr20 33057395 33057773 -39096109 - MLT1D LTR MaLR -103 523 7 305 272 48 48 chr20 33058497 33058642 -39095240 + MLT1I LTR MaLR 58 240 -265 2051 160 30 52 chr20 33058969 33059079 -39094803 + L1MC2 LINE L1 5093 5204 -1140 2453 103 0 0 chr20 33059079 33059390 -39094492 + AluSq SINE Alu 1 311 -2 2051 160 30 52 chr20 33059390 33059886 -39093996 + L1MC2 LINE L1 5204 5828 -516 1805 165 3 32 chr20 33059895 33060204 -39093678 + AluJo SINE Alu 4 303 -9 2047 128 21 0 chr20 33060208 33060496 -39093386 + AluJb SINE Alu 1 294 -18 2044 142 0 16 chr20 33060497 33060807 -39093075 + AluSx SINE Alu 1 305 -7 2274 110 0 3 chr20 33060809 33061119 -39092763 + AluSq SINE Alu 1 309 -4 233 125 54 0 chr20 33061132 33061188 -39092694 + (TA)n Simple_repeat Simple_repeat 2 60 0 2462 144 62 13 chr20 33061217 33061993 -39091889 - L1M2 LINE L1 -574 5738 4922 678 168 14 7 chr20 33061993 33062134 -39091748 + L1MB4 LINE L1 6037 6180 0 2152 124 0 29 chr20 33062140 33062455 -39091427 + AluSx SINE Alu 1 306 -6 287 310 14 0 chr20 33062455 33062526 -39091356 - MIR SINE MIR -163 99 28 580 264 120 30 chr20 33062897 33063339 -39090543 - MLT1H LTR MaLR -104 451 1 318 271 33 53 chr20 33063541 33063694 -39090188 - MIR SINE MIR -45 217 69 225 247 86 0 chr20 33063848 33063929 -39089953 - MIR SINE MIR -71 191 104 224 231 39 51 chr20 33063938 33064016 -39089866 - L2 LINE L2 -78 3235 3159 501 246 10 80 chr20 33065131 33065330 -39088552 - MER5A DNA MER1_type -3 186 2 989 304 98 35 chr20 33066161 33066618 -39087264 - L2 LINE L2 0 3313 2828 1552 156 67 32 chr20 33066847 33067130 -39086752 + AluJb SINE Alu 2 294 -18 2249 123 7 0 chr20 33067132 33067440 -39086442 + AluSx SINE Alu 1 310 -2 2374 158 65 38 chr20 33068358 33068885 -39084997 - L1MB7 LINE L1 0 6184 5644 2039 140 10 16 chr20 33069042 33069350 -39084532 - AluJo SINE Alu -5 307 2 472 265 42 54 chr20 33069499 33069665 -39084217 + MIR3 SINE MIR 10 173 -35 196 288 0 34 chr20 33070361 33070420 -39083462 + MIR SINE MIR 39 95 -113 * 318 307 52 26 chr20 33070412 33070487 -39083395 + MIR SINE MIR 63 135 -127 627 149 35 28 chr20 33070487 33070526 -39083356 - L1MB4 LINE L1 0 6180 6143 2330 105 0 25 chr20 33070526 33070840 -39083042 - AluSx SINE Alu -6 306 1 627 149 35 28 chr20 33070840 33070941 -39082941 - L1MB4 LINE L1 -37 6143 6039 318 307 52 26 chr20 33070941 33071018 -39082864 + MIR SINE MIR 135 219 -43 230 0 33 0 chr20 33071360 33071390 -39082492 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 408 125 0 0 chr20 33071543 33071607 -39082275 + (T)n Simple_repeat Simple_repeat 1 64 0 2141 107 7 19 chr20 33071657 33071965 -39081917 + AluSx SINE Alu 2 305 -7 699 126 0 59 chr20 33073149 33073268 -39080614 - FRAM SINE Alu -14 162 51 1769 154 29 4 chr20 33073306 33073644 -39080238 - AluJb SINE Alu 0 348 4 258 154 0 62 chr20 33073703 33073768 -39080114 + L1MA8 LINE L1 6220 6280 -11 332 195 0 0 chr20 33073771 33073837 -39080045 + Alu SINE Alu 1 49 -251 * 440 17 0 17 chr20 33073835 33073895 -39079987 - MSTB1 LTR MaLR -15 417 359 1186 182 0 10 chr20 33073895 33074093 -39079789 + AluJb SINE Alu 1 196 -116 5869 196 70 30 chr20 33074094 33075838 -39078044 - L1MB7 LINE L1 -716 5462 3659 6658 77 15 32 chr20 33075922 33077931 -39075951 - SVA Other Other -518 1384 1 213 39 0 0 chr20 33077933 33077959 -39075923 + (GGGAGA)n Simple_repeat Simple_repeat 1 26 0 235 308 149 0 chr20 33078092 33078287 -39075595 - L1MC/D LINE L1 -2331 5477 5254 198 0 0 0 chr20 33078564 33078586 -39075296 + (TA)n Simple_repeat Simple_repeat 2 23 0 1587 176 35 28 chr20 33078586 33078876 -39075006 - AluJo SINE Alu -20 292 1 205 286 36 24 chr20 33079191 33079275 -39074607 + MIR SINE MIR 38 122 -86 2302 118 0 0 chr20 33079309 33079605 -39074277 - AluSx SINE Alu -16 296 1 202 204 0 23 chr20 33079651 33079695 -39074187 + (CTTTG)n Simple_repeat Simple_repeat 3 45 0 691 242 102 42 chr20 33079948 33080163 -39073719 - MIR SINE MIR -15 247 20 606 167 313 0 chr20 33080173 33080317 -39073565 + MER5A DNA MER1_type 1 189 0 1988 122 58 7 chr20 33080393 33080688 -39073194 - AluJb SINE Alu -2 310 1 351 0 0 0 chr20 33080787 33080826 -39073056 + (CA)n Simple_repeat Simple_repeat 2 40 0 234 330 53 11 chr20 33080826 33080920 -39072962 + L2 LINE L2 2682 2779 -535 668 213 131 0 chr20 33080924 33081084 -39072798 + MER5A DNA MER1_type 4 187 -2 328 210 16 0 chr20 33081383 33081445 -39072437 + L2 LINE L2 3242 3304 -9 2363 89 7 0 chr20 33081449 33081752 -39072130 - AluSq SINE Alu -8 305 1 700 243 128 31 chr20 33081772 33081998 -39071884 + MIR SINE MIR 15 262 0 389 226 107 79 chr20 33082060 33082237 -39071645 + MIR SINE MIR 58 239 -23 189 258 48 32 chr20 33082789 33082851 -39071031 - MIR SINE MIR -65 143 81 198 304 122 35 chr20 33083036 33083151 -39070731 - MER5A DNA MER1_type 0 189 65 2216 115 36 17 chr20 33083151 33083507 -39070375 - L1PB4 LINE L1 0 6156 5794 333 0 0 0 chr20 33083509 33083546 -39070336 + (TG)n Simple_repeat Simple_repeat 2 38 0 1888 163 7 3 chr20 33083930 33084224 -39069658 + AluJo SINE Alu 1 295 -17 311 295 85 44 chr20 33084229 33084316 -39069566 - L1ME LINE L1 -297 5824 5742 2056 111 48 7 chr20 33084316 33084605 -39069277 - AluSx SINE Alu -11 301 1 311 295 85 44 chr20 33084605 33084812 -39069070 - L1ME LINE L1 -379 5742 5518 723 161 0 0 chr20 33085615 33085739 -39068143 + L1MD3 LINE L1 7872 7995 0 252 0 0 0 chr20 33086200 33086228 -39067654 + (TG)n Simple_repeat Simple_repeat 2 29 0 192 97 0 0 chr20 33086228 33086259 -39067623 + (TTGG)n Simple_repeat Simple_repeat 4 34 0 1097 224 142 73 chr20 33086569 33086844 -39067038 - L2 LINE L2 -14 3299 2979 1922 141 39 0 chr20 33086844 33087127 -39066755 + AluSq SINE Alu 5 298 -15 1097 224 142 73 chr20 33087127 33087303 -39066579 - L2 LINE L2 -334 2979 2817 366 242 5 59 chr20 33087968 33088154 -39065728 + (TCTCTG)n Simple_repeat Simple_repeat 4 179 0 487 288 74 70 chr20 33088324 33088543 -39065339 - MIR SINE MIR -6 256 34 1835 155 0 28 chr20 33088543 33088833 -39065049 - AluJo SINE Alu -30 282 1 487 288 74 70 chr20 33088833 33088856 -39065026 - MIR SINE MIR -228 34 13 660 234 179 21 chr20 33089143 33089379 -39064503 + MER46C DNA MER2_type 2 294 -44 2296 107 0 0 chr20 33089379 33089670 -39064212 - AluSx SINE Alu 0 312 22 660 234 179 21 chr20 33089670 33089724 -39064158 + MER46C DNA MER2_type 294 338 0 330 282 106 49 chr20 33089890 33090032 -39063850 - L1ME4a LINE L1 -247 5874 5725 713 269 129 47 chr20 33090038 33090440 -39063442 - L2 LINE L2 -1 3312 2878 382 273 29 29 chr20 33090440 33090579 -39063303 - L1ME4a LINE L1 -402 5719 5581 393 290 43 22 chr20 33090954 33091092 -39062790 - MIR SINE MIR 0 262 122 229 185 222 62 chr20 33091488 33091569 -39062313 - L2 LINE L2 -21 3292 3199 197 205 154 39 chr20 33092115 33092193 -39061689 + MIR SINE MIR 83 169 -93 387 314 59 7 chr20 33092219 33092372 -39061510 + L2 LINE L2 3099 3259 -13 183 42 0 0 chr20 33092434 33092458 -39061424 + (CAT)n Simple_repeat Simple_repeat 1 24 0 648 215 132 83 chr20 33092467 33092695 -39061187 - MIR SINE MIR -20 242 4 282 406 0 8 chr20 33092736 33092859 -39061023 - MIR SINE MIR -121 141 20 1934 126 0 86 chr20 33093079 33093404 -39060478 + AluSx SINE Alu 15 311 -1 182 311 189 0 chr20 33093576 33093666 -39060216 + MIR SINE MIR 37 143 -65 357 276 232 59 chr20 33093926 33094825 -39059057 + L2 LINE L2 2211 3272 0 183 325 65 0 chr20 33095130 33095207 -39058675 - L2 LINE L2 -54 3218 3137 571 231 137 16 chr20 33095275 33095457 -39058425 - MIR SINE MIR -10 252 49 2509 79 3 0 chr20 33095655 33095960 -39057922 + AluY SINE Alu 1 306 -5 314 206 284 0 chr20 33096896 33096998 -39056884 + MIR SINE MIR 12 142 -120 259 261 77 39 chr20 33097472 33097602 -39056280 - L2 LINE L2 -486 2828 2694 258 295 107 8 chr20 33098031 33098155 -39055727 - MIR SINE MIR -69 139 58 373 223 69 62 chr20 33098608 33098660 -39055222 + L2 LINE L2 3142 3192 -80 2296 113 0 0 chr20 33098660 33098962 -39054920 - AluSg SINE Alu -8 302 1 373 223 69 62 chr20 33098962 33099039 -39054843 + L2 LINE L2 3192 3272 0 1676 181 25 35 chr20 33099346 33099661 -39054221 + AluJo SINE Alu 1 312 0 773 272 92 34 chr20 33100381 33100675 -39053207 - L2 LINE L2 -1 3312 3002 206 281 115 21 chr20 33100798 33100894 -39052988 - MIR SINE MIR 0 262 158 191 279 207 14 chr20 33101040 33101180 -39052702 - L2 LINE L2 -255 3017 2851 2166 108 10 7 chr20 33101701 33101996 -39051886 - AluSc SINE Alu -13 296 1 302 296 124 44 chr20 33102008 33102258 -39051624 + L1ME4a LINE L1 5017 5286 -860 2272 131 0 0 chr20 33102289 33102594 -39051288 + AluSx SINE Alu 1 305 -7 1688 133 8 0 chr20 33102607 33102855 -39051027 + AluSx SINE Alu 59 308 -4 263 276 67 80 chr20 33102927 33103152 -39050730 + L1ME4a LINE L1 5383 5604 -517 857 165 0 0 chr20 33103154 33103287 -39050595 + FLAM_C SINE Alu 1 133 0 2659 59 0 0 chr20 33103382 33103688 -39050194 - AluY SINE Alu -5 306 1 230 260 244 4 chr20 33103689 33103939 -39049943 + L1ME4a LINE L1 5796 6105 -16 643 296 44 15 chr20 33104871 33105077 -39048805 + MIR SINE MIR 31 242 -20 192 40 0 0 chr20 33105254 33105279 -39048603 + (CTGGGG)n Simple_repeat Simple_repeat 5 29 0 291 218 167 0 chr20 33105782 33105860 -39048022 + MIR3 SINE MIR 108 198 -10 1342 111 0 0 chr20 33106387 33106568 -39047314 - AluSp SINE Alu 0 313 133 2496 75 0 28 chr20 33106568 33106888 -39046994 - AluY SINE Alu 0 311 1 241 274 167 20 chr20 33107799 33107901 -39045981 + MIR SINE MIR 30 146 -62 1940 159 17 0 chr20 33108186 33108482 -39045400 + AluJo SINE Alu 2 302 -10 497 260 39 64 chr20 33108562 33108766 -39045116 + MIR SINE MIR 3 201 -61 1519 147 37 16 chr20 33108858 33109103 -39044779 - AluJb SINE Alu -6 306 57 2367 93 3 0 chr20 33109171 33109471 -39044411 - AluSx SINE Alu -11 301 1 436 278 32 117 chr20 33109484 33109732 -39044150 - L2 LINE L2 -50 3222 2996 271 274 68 27 chr20 33110715 33110861 -39043021 - L1ME4a LINE L1 -23 6098 5947 199 244 39 13 chr20 33110889 33110967 -39042915 - MIR SINE MIR 0 262 183 1202 126 55 0 chr20 33111106 33111305 -39042577 + MER2 DNA MER2_type 1 210 -135 1724 146 40 40 chr20 33111324 33111625 -39042257 - AluJb SINE Alu -11 301 1 2142 111 0 60 chr20 33111638 33111971 -39041911 - AluSq SINE Alu 0 313 1 317 225 62 0 chr20 33112041 33112121 -39041761 - L1ME4a LINE L1 -177 5944 5860 382 167 15 0 chr20 33112935 33113001 -39040881 + MIR SINE MIR 87 153 -109 233 358 67 0 chr20 33113299 33113419 -39040463 + MIR SINE MIR 64 191 -71 2432 81 0 3 chr20 33113419 33113716 -39040166 + AluSg SINE Alu 1 296 -14 191 250 36 18 chr20 33114275 33114331 -39039551 + MIR SINE MIR 82 138 -70 656 255 26 81 chr20 33115170 33115387 -39038495 + MIR SINE MIR 7 208 -54 2492 78 0 7 chr20 33115387 33115696 -39038186 + AluSc SINE Alu 1 307 -2 656 255 26 81 chr20 33115696 33115749 -39038133 + MIR SINE MIR 208 262 0 538 167 87 16 chr20 33115761 33115887 -39037995 - L1ME1 LINE L1 0 6166 6032 429 264 114 50 chr20 33116304 33116524 -39037358 + L1M4 LINE L1 2940 3173 -2973 574 299 62 68 chr20 33117002 33117124 -39036758 - L3 LINE CR1 -7 1570 1449 1262 136 61 9 chr20 33117124 33117337 -39036545 + MER58A DNA MER1_type 1 224 0 574 299 62 68 chr20 33117337 33117522 -39036360 - L3 LINE CR1 -128 1449 1265 240 178 14 55 chr20 33117523 33117596 -39036286 - MLT1K LTR MaLR -2 586 517 262 245 38 57 chr20 33117598 33117704 -39036178 - MLT1K LTR MaLR -47 541 438 2168 83 4 7 chr20 33117710 33117988 -39035894 + AluSc SINE Alu 27 303 -6 321 224 0 30 chr20 33117989 33118056 -39035826 + L1MC4 LINE L1 6652 6716 -1326 341 318 15 15 chr20 33118064 33118196 -39035686 - MLT1K LTR MaLR -175 413 282 2395 86 3 0 chr20 33118325 33118629 -39035253 - AluSx SINE Alu -7 305 1 1499 195 43 14 chr20 33118959 33119241 -39034641 + AluJo SINE Alu 1 290 -22 26 50 0 0 chr20 33121883 33121923 -39031959 + AT_rich Low_complexity Low_complexity 1 40 0 477 249 106 110 chr20 33122289 33122763 -39031119 - MLT1K LTR MaLR -3 473 2 536 281 63 104 chr20 33122763 33122809 -39031073 - MLT1K LTR MaLR -24 564 67 488 226 24 101 chr20 33122905 33123073 -39030809 - MIR SINE MIR -13 249 95 189 0 0 0 chr20 33123183 33123204 -39030678 + (TG)n Simple_repeat Simple_repeat 2 22 0 276 264 124 66 chr20 33123204 33123325 -39030557 - L1MA10 LINE L1 -40 6294 6167 1835 107 67 130 chr20 33123354 33123685 -39030197 + MSTB1 LTR MaLR 14 364 -68 580 182 33 8 chr20 33123685 33123806 -39030076 + FLAM_A SINE Alu 2 125 -8 1835 107 67 130 chr20 33123806 33123836 -39030046 + MSTB1 LTR MaLR 364 394 -38 2031 107 79 0 chr20 33123836 33124116 -39029766 + AluSx SINE Alu 1 302 -10 1835 107 67 130 chr20 33124116 33124200 -39029682 + MSTB1 LTR MaLR 394 432 0 268 274 32 11 chr20 33124200 33124295 -39029587 - L1ME2 LINE L1 -169 6064 5968 1240 166 63 107 chr20 33125561 33126065 -39027817 - L1ME2 LINE L1 -557 5678 5193 729 161 0 36 chr20 33126065 33126202 -39027680 - FLAM_A SINE Alu -1 132 1 1240 166 63 107 chr20 33126202 33126272 -39027610 - L1ME2 LINE L1 -1042 5193 5121 1543 191 17 20 chr20 33126275 33126568 -39027314 - AluJo SINE Alu -8 304 13 1727 175 19 19 chr20 33126594 33126902 -39026980 - AluJo SINE Alu -4 308 1 1795 177 43 47 chr20 33126904 33127083 -39026799 - L1ME2 LINE L1 -1582 4633 4455 2270 73 49 0 chr20 33127083 33127369 -39026513 - AluSp SINE Alu -11 302 3 1795 177 43 47 chr20 33127369 33127382 -39026500 - L1ME2 LINE L1 -1760 4455 4443 2013 152 0 13 chr20 33127382 33127691 -39026191 - AluSx SINE Alu -7 305 1 1795 177 43 47 chr20 33127691 33127982 -39025900 - L1ME2 LINE L1 -1772 4443 4151 2047 113 17 17 chr20 33127982 33128314 -39025568 - AluSx SINE Alu 0 312 1 2885 215 99 8 chr20 33128324 33129195 -39024687 - L1ME2 LINE L1 -3044 3171 2222 2393 91 7 0 chr20 33129196 33129493 -39024389 - AluSx SINE Alu -13 299 1 362 193 0 68 chr20 33129493 33129581 -39024301 - L1ME2 LINE L1 -5321 1075 994 774 143 20 0 chr20 33129582 33129729 -39024153 - L1MB4 LINE L1 -2 6178 6029 2294 96 7 10 chr20 33129730 33130031 -39023851 + AluSx SINE Alu 1 300 -12 459 52 0 0 chr20 33130032 33130090 -39023792 + (CCCCCT)n Simple_repeat Simple_repeat 3 60 0 5619 66 29 48 chr20 33130090 33131130 -39022752 + SVA Other Other 58 868 -520 1937 91 13 74 chr20 33131197 33131659 -39022223 + SVA Other Other 433 866 -520 3468 76 25 67 chr20 33131676 33132317 -39021565 + SVA Other Other 433 1046 -340 182 62 31 0 chr20 33132318 33132350 -39021532 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 3566 168 64 24 chr20 33132352 33132569 -39021313 - L1MB3 LINE L1 -143 6040 5833 2059 118 3 35 chr20 33132569 33132882 -39021000 + AluSx SINE Alu 1 303 -9 3566 168 64 24 chr20 33132882 33133514 -39020368 - L1MB3 LINE L1 -350 5833 5145 919 205 0 0 chr20 33133514 33133675 -39020207 - FAM SINE Alu -14 161 1 3566 168 64 24 chr20 33133675 33134008 -39019874 - L1MB3 LINE L1 -1038 5145 4826 2712 250 62 24 chr20 33134005 33134908 -39018974 - L1ME2 LINE L1 -5425 971 35 * 2325 98 3 13 chr20 33134917 33135223 -39018659 - AluSq SINE Alu -10 303 1 1859 132 3 51 chr20 33135284 33135451 -39018431 - AluJb SINE Alu 0 301 153 2579 51 0 35 chr20 33135451 33135763 -39018119 - AluY SINE Alu -10 301 1 1859 132 3 51 chr20 33135763 33135910 -39017972 - AluJb SINE Alu -148 153 1 555 298 148 23 chr20 33136266 33136571 -39017311 + MLT1L LTR MaLR 173 515 -100 200 304 14 29 chr20 33137337 33137406 -39016476 + L3 LINE CR1 1387 1454 -123 881 231 159 50 chr20 33137508 33137591 -39016291 - L2 LINE L2 0 3313 3240 2218 115 14 0 chr20 33137591 33137886 -39015996 + AluSx SINE Alu 3 301 -11 881 231 159 50 chr20 33137886 33138172 -39015710 - L2 LINE L2 -73 3240 2987 2131 143 0 3 chr20 33138172 33138466 -39015416 + AluJb SINE Alu 1 293 -19 881 231 159 50 chr20 33138466 33138665 -39015217 - L2 LINE L2 -326 2987 2680 211 195 0 0 chr20 33138679 33138720 -39015162 + MIR SINE MIR 222 262 0 277 305 60 20 chr20 33139608 33139759 -39014123 + L2 LINE L2 2892 3048 -224 345 258 22 0 chr20 33139853 33139942 -39013940 - MER94 DNA DNA -42 92 2 2326 107 0 0 chr20 33140176 33140476 -39013406 + AluSx SINE Alu 1 300 -12 633 272 50 39 chr20 33140483 33140832 -39013050 - L2 LINE L2 -190 3123 2768 2090 102 0 46 chr20 33140832 33141136 -39012746 - AluSg SINE Alu -20 290 1 633 272 50 39 chr20 33141136 33141204 -39012678 - L2 LINE L2 -545 2768 2702 1948 111 52 17 chr20 33141791 33142079 -39011803 + AluJo SINE Alu 1 298 -14 827 123 0 0 chr20 33142085 33142199 -39011683 + FLAM_C SINE Alu 5 118 -15 201 159 0 0 chr20 33144606 33144650 -39009232 + CT-rich Low_complexity Low_complexity 1 44 0 29 84 0 0 chr20 33144887 33144958 -39008924 + GC_rich Low_complexity Low_complexity 1 71 0 389 286 66 98 chr20 33146609 33147018 -39006864 + MLT1K LTR MaLR 191 586 -2 238 227 27 13 chr20 33152460 33152535 -39001347 + L1ME LINE L1 5729 5804 -360 700 281 89 31 chr20 33152544 33152904 -39000978 + L1MC4a LINE L1 5644 6024 -1784 1772 185 14 0 chr20 33153079 33153371 -39000511 + AluJo SINE Alu 3 298 -14 475 266 101 6 chr20 33154066 33154235 -38999647 - MIR3 SINE MIR -17 191 7 1887 162 10 19 chr20 33154271 33154579 -38999303 + AluJo SINE Alu 1 305 -7 459 303 31 37 chr20 33154760 33154922 -38998960 + L2 LINE L2 3153 3313 0 2343 42 46 7 chr20 33154961 33155244 -38998638 - AluY SINE Alu -17 294 1 2160 121 7 10 chr20 33155314 33155612 -38998270 - AluSx SINE Alu -15 297 1 233 303 118 0 chr20 33155841 33155917 -38997965 + MIR3 SINE MIR 81 165 -43 1582 191 15 4 chr20 33156021 33156294 -38997588 + AluJo SINE Alu 1 276 -36 210 37 0 0 chr20 33156303 33156330 -38997552 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 280 146 0 21 chr20 33156383 33156431 -38997451 + Alu SINE Alu 1 47 -252 825 278 43 0 chr20 33157052 33157286 -38996596 + MIR SINE MIR 19 262 0 524 224 81 23 chr20 33159717 33159891 -38993991 + MIR SINE MIR 67 250 -12 425 254 90 8 chr20 33160372 33160506 -38993376 + MIR SINE MIR 117 261 -1 216 0 0 0 chr20 33160852 33160876 -38993006 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 22 35 0 0 chr20 33162544 33162573 -38991309 + GC_rich Low_complexity Low_complexity 1 29 0 360 263 11 0 chr20 33162930 33163025 -38990857 - MIR3 SINE MIR -25 183 88 226 234 78 0 chr20 33163043 33163107 -38990775 - L3 LINE CR1 -1202 375 307 * 665 228 21 99 chr20 33163105 33163253 -38990629 - L2 LINE L2 -1 3312 3187 1615 143 9 78 chr20 33163253 33163574 -38990308 + AluJo SINE Alu 1 299 -13 665 228 21 99 chr20 33163574 33163658 -38990224 - L2 LINE L2 -126 3187 3098 1068 268 99 15 chr20 33163746 33164235 -38989647 + L2 LINE L2 2776 3312 -1 528 270 0 22 chr20 33165117 33165254 -38988628 - MIR SINE MIR -113 149 16 193 195 134 61 chr20 33165315 33165397 -38988485 - MIR SINE MIR -99 163 76 195 191 214 24 chr20 33165490 33165574 -38988308 + L2 LINE L2 3214 3313 0 489 291 64 18 chr20 33165678 33165898 -38987984 + MIR SINE MIR 2 231 -31 2356 90 7 0 chr20 33165998 33166288 -38987594 - AluSc SINE Alu -17 292 1 358 293 149 5 chr20 33166369 33166584 -38987298 + L2 LINE L2 1787 2032 -1282 534 278 98 0 chr20 33166694 33166867 -38987015 + MIR SINE MIR 73 262 0 1828 164 27 0 chr20 33166988 33167280 -38986602 - AluJo SINE Alu -8 304 5 1867 183 3 3 chr20 33167288 33167600 -38986282 - AluSx SINE Alu 0 312 1 2199 130 0 3 chr20 33167604 33167904 -38985978 - AluSq SINE Alu -14 299 1 1954 97 23 0 chr20 33167946 33168204 -38985678 + AluSx SINE Alu 49 312 0 2372 82 3 3 chr20 33168209 33168503 -38985379 + AluSg SINE Alu 1 294 -16 561 302 77 60 chr20 33168792 33168851 -38985031 - L1ME LINE L1 -451 5670 5613 1990 164 0 0 chr20 33168851 33169143 -38984739 - AluJo SINE Alu -20 292 1 561 302 77 60 chr20 33169143 33169478 -38984404 - L1ME LINE L1 -508 5613 5271 2208 100 3 20 chr20 33169607 33169907 -38983975 - AluSx SINE Alu -17 295 1 305 321 61 66 chr20 33170238 33170474 -38983408 + MIR SINE MIR 2 236 -26 * 1049 232 8 24 chr20 33170472 33170722 -38983160 - MIR SINE MIR 0 262 17 531 299 40 0 chr20 33170850 33171027 -38982855 + MIR3 SINE MIR 2 185 -23 718 228 0 0 chr20 33172200 33172345 -38981537 + FRAM SINE Alu 17 161 -15 472 252 22 15 chr20 33172455 33172590 -38981292 - MIR SINE MIR -57 205 70 776 290 36 0 chr20 33172624 33172848 -38981034 - MIR SINE MIR 0 262 31 1759 175 7 7 chr20 33172866 33173157 -38980725 - AluJo SINE Alu -21 291 1 506 301 43 60 chr20 33173208 33173510 -38980372 + MARNA DNA Mariner 135 431 -155 466 251 222 97 chr20 33173752 33174166 -38979716 - L2 LINE L2 -5 3308 2843 348 197 74 66 chr20 33174174 33174227 -38979655 - MLT1H LTR MaLR -8 541 490 2392 45 45 3 chr20 33174227 33174515 -38979367 - AluY SINE Alu -11 300 1 348 197 74 66 chr20 33174515 33174583 -38979299 - MLT1H LTR MaLR -59 490 419 1035 142 23 73 chr20 33174688 33174948 -38978934 - L1MB4 LINE L1 -194 5986 5740 239 232 43 0 chr20 33174948 33175017 -38978865 - MLT1G3 LTR MaLR -109 433 362 662 176 8 40 chr20 33175019 33175144 -38978738 - FLAM_C SINE Alu -18 125 5 2144 129 7 3 chr20 33175178 33175473 -38978409 + AluSx SINE Alu 1 296 -16 525 278 74 14 chr20 33175508 33175792 -38978090 - MLT1G3 LTR MaLR -236 326 52 339 231 176 0 chr20 33176000 33176108 -38977774 + MIR3 SINE MIR 36 162 -46 1621 172 10 20 chr20 33176148 33176444 -38977438 + AluJo SINE Alu 2 294 -18 1202 229 70 38 chr20 33176593 33176734 -38977148 - MLT1J LTR MaLR -7 504 369 2177 121 0 16 chr20 33176734 33177039 -38976843 + AluSx SINE Alu 1 300 -12 1202 229 70 38 chr20 33177039 33177294 -38976588 - MLT1J LTR MaLR -142 369 95 262 246 202 35 chr20 33178432 33178546 -38975336 - L2 LINE L2 -2 3270 3138 1228 224 21 0 chr20 33178547 33178788 -38975094 + MIR SINE MIR 3 248 -14 2428 93 0 0 chr20 33178828 33179130 -38974752 + AluSx SINE Alu 1 302 -10 276 302 39 28 chr20 33179461 33179640 -38974242 + L1ME LINE L1 5695 5875 -295 353 242 21 11 chr20 33179704 33179799 -38974083 - MIR SINE MIR -1 261 166 416 207 43 78 chr20 33179800 33179896 -38973986 + L1MA9 LINE L1 6179 6277 -14 2371 100 7 0 chr20 33179896 33180205 -38973677 - AluY SINE Alu 0 311 1 1758 167 7 17 chr20 33180208 33180507 -38973375 - AluJb SINE Alu -16 296 1 416 207 43 78 chr20 33180507 33180522 -38973360 + L1MA9 LINE L1 6279 6290 -1 465 272 116 0 chr20 33180540 33180687 -38973195 - MIR SINE MIR -86 176 13 212 0 36 0 chr20 33180821 33180849 -38973033 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 23 0 0 0 chr20 33180897 33180920 -38972962 + AT_rich Low_complexity Low_complexity 1 23 0 3289 179 79 14 chr20 33180955 33181154 -38972728 - L1MD2 LINE L1 -3 6356 6171 267 114 0 0 chr20 33181154 33181198 -38972684 + (TG)n Simple_repeat Simple_repeat 2 45 0 3289 179 79 14 chr20 33181198 33181760 -38972122 - L1MD2 LINE L1 -188 6171 5546 188 260 14 96 chr20 33181933 33181955 -38971927 - L2 LINE L2 0 3272 3250 1847 139 9 47 chr20 33181955 33182272 -38971610 + AluJb SINE Alu 1 305 -7 188 260 14 96 chr20 33182272 33182322 -38971560 - L2 LINE L2 -22 3250 3206 313 195 230 35 chr20 33182442 33182529 -38971353 + L2 LINE L2 3169 3272 0 273 213 88 110 chr20 33183380 33183516 -38970366 - MIR SINE MIR -107 155 23 870 318 97 8 chr20 33183930 33184417 -38969465 + L1 LINE L1 3634 4163 -1983 1813 167 0 23 chr20 33184497 33184796 -38969086 - AluJb SINE Alu -20 292 1 2516 70 0 0 chr20 33184824 33185123 -38968759 + AluY SINE Alu 1 299 -12 2365 101 0 0 chr20 33185131 33185429 -38968453 + AluSx SINE Alu 1 298 -14 316 158 105 0 chr20 33186196 33186253 -38967629 + L2 LINE L2 3245 3307 -6 852 231 156 0 chr20 33186284 33186509 -38967373 + MIR SINE MIR 2 261 -1 667 111 102 19 chr20 33186914 33187022 -38966860 + FLAM_C SINE Alu 2 118 -25 222 37 0 0 chr20 33187026 33187053 -38966829 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 442 246 39 46 chr20 33187065 33187195 -38966687 - MIR3 SINE MIR -5 203 75 412 344 58 51 chr20 33187763 33188504 -38965378 - L2 LINE L2 -1 3271 2463 1257 204 5 5 chr20 33188619 33188839 -38965043 + AluJb SINE Alu 1 220 -92 228 250 88 15 chr20 33188918 33188986 -38964896 - L2 LINE L2 -301 2971 2899 907 170 0 0 chr20 33191060 33191201 -38962681 - AluJb SINE Alu -16 296 156 249 273 154 9 chr20 33191287 33191397 -38962485 + MIR SINE MIR 79 204 -58 423 309 92 46 chr20 33191486 33191703 -38962179 - MIR SINE MIR -34 228 2 1092 235 121 72 chr20 33191901 33192624 -38961258 - L2 LINE L2 -2 3311 2533 481 249 130 132 chr20 33192627 33192829 -38961053 - L1ME4a LINE L1 -136 5985 5783 2131 101 10 34 chr20 33192829 33193126 -38960756 + AluSx SINE Alu 1 290 -22 481 249 130 132 chr20 33193126 33193293 -38960589 - L1ME4a LINE L1 -338 5783 5617 477 256 80 0 chr20 33193449 33193574 -38960308 - L2 LINE L2 -772 2542 2408 186 186 153 17 chr20 33193563 33193622 -38960260 + MIR SINE MIR 69 135 -73 * 480 213 90 19 chr20 33193649 33193804 -38960078 + MER5A DNA MER1_type 1 166 -23 684 203 123 12 chr20 33193819 33193982 -38959900 + MER5A DNA MER1_type 9 189 0 1947 152 3 13 chr20 33194236 33194539 -38959343 + AluJo SINE Alu 3 302 -10 204 338 15 0 chr20 33194681 33194749 -38959133 + GA-rich Low_complexity Low_complexity 1 69 0 593 241 111 41 chr20 33195366 33195555 -38958327 - MER113 DNA MER1_type? -108 413 191 1776 149 22 0 chr20 33195555 33195860 -38958022 - AluJb SINE Alu 0 311 1 593 241 111 41 chr20 33195860 33195984 -38957898 - MER113 DNA MER1_type? -330 191 77 1773 136 27 37 chr20 33196225 33196519 -38957363 + AluJo SINE Alu 1 291 -21 781 300 29 4 chr20 33196532 33196772 -38957110 - MIR SINE MIR -3 259 14 268 347 66 16 chr20 33196815 33196936 -38956946 + L2 LINE L2 3127 3253 -19 2333 83 10 13 chr20 33196940 33197076 -38956806 + AluSx SINE Alu 1 136 -176 2487 84 3 3 chr20 33197076 33197387 -38956495 + AluSp SINE Alu 1 311 -2 2333 83 10 13 chr20 33197387 33197551 -38956331 + AluSx SINE Alu 136 300 -12 216 0 0 0 chr20 33197553 33197577 -38956305 + (TA)n Simple_repeat Simple_repeat 2 25 0 973 129 0 0 chr20 33198214 33198346 -38955536 + AluSq/x SINE Alu 1 132 -180 407 297 62 55 chr20 33198383 33198520 -38955362 + MIR SINE MIR 5 146 -116 1672 186 0 17 chr20 33198520 33198816 -38955066 + AluJb SINE Alu 1 291 -21 407 297 62 55 chr20 33198816 33198934 -38954948 + MIR SINE MIR 146 262 0 209 151 0 0 chr20 33199523 33199563 -38954319 + MIR SINE MIR 115 153 -109 200 268 31 82 chr20 33199550 33199647 -38954235 - L2 LINE L2 -62 3251 3160 * 810 153 12 112 chr20 33199667 33199837 -38954045 + AluJb SINE Alu 14 166 -146 1036 185 0 6 chr20 33199845 33200023 -38953859 + AluJb SINE Alu 128 304 -8 2366 122 0 0 chr20 33200062 33200374 -38953508 - AluSx SINE Alu 0 312 1 2284 123 3 0 chr20 33200410 33200720 -38953162 + AluSx SINE Alu 1 311 -1 2312 97 3 7 chr20 33200722 33201022 -38952860 + AluSc SINE Alu 1 299 -10 956 172 32 0 chr20 33201022 33201179 -38952703 + AluJb SINE Alu 134 295 -17 736 230 143 0 chr20 33201179 33201375 -38952507 - L2 LINE L2 -162 3151 2928 748 122 0 46 chr20 33201491 33201622 -38952260 - AluSg/x SINE Alu 0 310 186 1644 202 4 0 chr20 33201626 33201898 -38951984 - AluJb SINE Alu -39 273 1 261 75 0 0 chr20 33201903 33201943 -38951939 + (TTTG)n Simple_repeat Simple_repeat 1 40 0 2269 70 4 4 chr20 33201944 33202217 -38951665 - AluSp SINE Alu -32 281 9 392 96 41 27 chr20 33202217 33202290 -38951592 - L2 LINE L2 -533 2781 2708 2352 84 0 3 chr20 33202292 33202591 -38951291 - AluY SINE Alu -13 298 1 2120 189 114 18 chr20 33202605 33202972 -38950910 - MLT1F LTR MaLR 0 542 211 1535 146 12 103 chr20 33202972 33203131 -38950751 - AluJb SINE Alu -20 292 120 2150 116 0 3 chr20 33203131 33203424 -38950458 - AluSc SINE Alu -17 292 1 1535 146 12 103 chr20 33203424 33203460 -38950422 - AluJb SINE Alu -192 120 82 2414 95 0 3 chr20 33203460 33203764 -38950118 + AluSx SINE Alu 1 303 -9 1535 146 12 103 chr20 33203764 33203888 -38949994 - AluJb SINE Alu -230 82 1 2120 189 114 18 chr20 33203888 33204013 -38949869 - MLT1F LTR MaLR -331 211 3 1501 206 45 64 chr20 33204017 33204252 -38949630 - L1ME1 LINE L1 -2 6164 5941 2267 113 3 0 chr20 33204252 33204553 -38949329 - AluSq SINE Alu -11 302 1 1501 206 45 64 chr20 33204553 33204789 -38949093 - L1ME1 LINE L1 -225 5941 5702 431 213 0 0 chr20 33204789 33204869 -38949013 - MLT1A1 LTR MaLR 0 365 286 2408 52 31 0 chr20 33204870 33205156 -38948726 - AluY SINE Alu -12 299 5 1931 123 39 3 chr20 33205185 33205470 -38948412 - AluSq SINE Alu -18 295 1 2326 112 0 31 chr20 33205483 33205804 -38948078 - AluSx SINE Alu 0 312 2 791 104 18 67 chr20 33205804 33205962 -38947920 - L1MB3 LINE L1 -40 6143 5994 1474 183 20 4 chr20 33205966 33206262 -38947620 - AluJo SINE Alu 0 330 31 259 298 21 0 chr20 33206287 33206381 -38947501 - L1ME LINE L1 -5927 143 48 258 318 12 0 chr20 33206389 33206474 -38947408 - L2 LINE L2 -608 2706 2621 211 343 46 19 chr20 33206465 33206573 -38947309 - L2 LINE L2 -213 3059 2949 * 2251 101 0 44 chr20 33206590 33206908 -38946974 - AluSx SINE Alu -8 304 1 1915 169 0 16 chr20 33207503 33207816 -38946066 - AluJb SINE Alu -4 308 1 2627 188 27 40 chr20 33207890 33208438 -38945444 - MLT1F LTR MaLR -1 541 1 2086 122 48 0 chr20 33208638 33208933 -38944949 + AluSq SINE Alu 1 309 -4 2280 109 0 0 chr20 33209002 33209306 -38944576 + AluY SINE Alu 1 304 -7 1934 166 14 0 chr20 33209317 33209612 -38944270 - AluJb SINE Alu -13 299 1 2244 101 7 0 chr20 33209621 33209908 -38943974 - AluSx SINE Alu -19 293 5 2192 210 107 20 chr20 33209986 33210529 -38943353 - MLT1G LTR MaLR 0 590 1 868 140 0 56 chr20 33210540 33210683 -38943199 - AluJo SINE Alu -177 135 1 2236 117 0 0 chr20 33210706 33210996 -38942886 + AluSx SINE Alu 1 290 -22 456 307 43 12 chr20 33211444 33211607 -38942275 - L3 LINE CR1 -14 1563 1396 2489 95 0 13 chr20 33211644 33211960 -38941922 + AluSx SINE Alu 1 312 0 762 249 30 63 chr20 33211962 33212180 -38941702 - MER102b DNA MER1_type -1100 328 104 1819 161 39 0 chr20 33212180 33212460 -38941422 - AluJb SINE Alu -20 292 2 762 249 30 63 chr20 33212460 33212489 -38941393 - MER102b DNA MER1_type -1324 104 76 2199 129 0 0 chr20 33212489 33212791 -38941091 - AluSg SINE Alu -8 302 1 762 249 30 63 chr20 33212791 33212875 -38941007 - MER102b DNA MER1_type -1352 76 7 381 252 205 16 chr20 33212882 33213009 -38940873 + MIR SINE MIR 14 164 -98 1123 161 101 35 chr20 33213052 33213251 -38940631 - AluJo SINE Alu -83 229 18 1412 160 0 0 chr20 33213251 33213463 -38940419 + AluSg/x SINE Alu 86 297 -13 1842 154 7 17 chr20 33213501 33213785 -38940097 + AluJo SINE Alu 1 283 -29 261 0 0 0 chr20 33213785 33213814 -38940068 + (CAAT)n Simple_repeat Simple_repeat 2 30 0 1842 154 7 17 chr20 33213814 33213828 -38940054 + AluJo SINE Alu 283 296 -16 2306 106 7 0 chr20 33213889 33214181 -38939701 - AluSx SINE Alu -17 295 2 2232 83 17 3 chr20 33214188 33214478 -38939404 - AluSg SINE Alu -16 294 1 2165 88 42 32 chr20 33214535 33214719 -38939163 - AluSx SINE Alu -1 311 121 2313 102 0 19 chr20 33214719 33215032 -38938850 - AluSg SINE Alu -3 307 1 2165 88 42 32 chr20 33215032 33215155 -38938727 - AluSx SINE Alu -191 121 1 486 204 215 29 chr20 33215809 33215918 -38937964 + MIR SINE MIR 48 135 -127 2358 77 3 0 chr20 33215918 33216264 -38937618 + AluSq SINE Alu 1 347 0 486 204 215 29 chr20 33216264 33216325 -38937557 + MIR SINE MIR 135 251 -11 1895 168 0 3 chr20 33216656 33216954 -38936928 + AluJb SINE Alu 5 301 -11 292 234 2 0 chr20 33217195 33217260 -38936622 - MIR SINE MIR -68 140 84 2278 129 0 0 chr20 33217616 33217926 -38935956 + AluSx SINE Alu 1 310 -2 318 298 49 24 chr20 33217944 33218149 -38935733 - L1ME4a LINE L1 -2 6119 5910 828 236 112 83 chr20 33218170 33218237 -38935645 + MLT1L LTR MaLR 1 65 -550 1885 162 7 0 chr20 33218237 33218527 -38935355 - AluJo SINE Alu -19 293 2 828 236 112 83 chr20 33218527 33218660 -38935222 + MLT1L LTR MaLR 65 193 -422 1029 175 0 87 chr20 33218660 33218794 -38935088 - MER3 DNA MER1_type 0 209 102 2293 117 7 0 chr20 33218794 33219103 -38934779 + AluSq SINE Alu 1 311 -2 1029 175 0 87 chr20 33219103 33219197 -38934685 - MER3 DNA MER1_type -107 102 1 828 236 112 83 chr20 33219197 33219431 -38934451 + MLT1L LTR MaLR 193 449 -166 2274 119 6 3 chr20 33219442 33219753 -38934129 - AluSq SINE Alu -1 312 1 1781 134 72 14 chr20 33219779 33220069 -38933813 + AluJb SINE Alu 1 307 -5 4183 150 49 46 chr20 33220069 33220344 -38933538 - L1MB3 LINE L1 -9 6174 5901 381 43 0 0 chr20 33220354 33220401 -38933481 + (TA)n Simple_repeat Simple_repeat 2 48 0 2331 110 0 0 chr20 33220401 33220698 -38933184 - AluSg SINE Alu -10 300 1 2291 109 0 0 chr20 33220698 33220990 -38932892 - AluSx SINE Alu -19 293 1 4183 150 49 46 chr20 33220990 33221485 -38932397 - L1MB3 LINE L1 -282 5901 5409 2259 107 3 0 chr20 33221485 33221785 -38932097 - AluSq SINE Alu -12 301 1 4183 150 49 46 chr20 33221785 33221844 -38932038 - L1MB3 LINE L1 -774 5409 5352 1234 199 123 25 chr20 33221844 33222120 -38931762 - AluJb SINE Alu -9 303 1 4183 150 49 46 chr20 33222120 33222172 -38931710 - L1MB3 LINE L1 -831 5352 5302 1859 112 79 4 chr20 33222172 33222449 -38931433 - AluSq SINE Alu -15 298 1 4183 150 49 46 chr20 33222449 33222546 -38931336 - L1MB3 LINE L1 -881 5302 5182 417 39 0 0 chr20 33222679 33222730 -38931152 + (TTCC)n Simple_repeat Simple_repeat 4 54 0 189 107 0 0 chr20 33222728 33222756 -38931126 + (TC)n Simple_repeat Simple_repeat 2 29 0 * 2303 120 0 0 chr20 33222756 33223065 -38930817 - AluSc SINE Alu 0 309 1 451 292 92 5 chr20 33223067 33223262 -38930620 - L1ME4a LINE L1 -293 5828 5617 2496 72 0 3 chr20 33223281 33223588 -38930294 - AluY SINE Alu -5 306 1 1944 162 3 7 chr20 33223676 33223984 -38929898 - AluJo SINE Alu -5 307 1 1549 190 3 13 chr20 33224041 33224202 -38929680 - AluJo SINE Alu -12 300 142 2195 106 0 3 chr20 33224202 33224503 -38929379 - AluY SINE Alu -11 300 1 1549 190 3 13 chr20 33224503 33224641 -38929241 - AluJo SINE Alu -170 142 4 197 303 30 15 chr20 33224670 33224736 -38929146 - L2 LINE L2 -30 3242 3176 2048 105 0 38 chr20 33224819 33225132 -38928750 + AluSx SINE Alu 1 301 -11 317 218 99 35 chr20 33225185 33225338 -38928544 - MIR SINE MIR -50 212 38 607 289 47 30 chr20 33225727 33225775 -38928107 - MIR SINE MIR -4 258 212 1823 162 30 0 chr20 33225775 33226078 -38927804 - AluJb SINE Alu 0 312 1 607 289 47 30 chr20 33226078 33226261 -38927621 - MIR SINE MIR -50 212 23 1256 161 15 0 chr20 33226283 33226488 -38927394 - MER3 DNA MER1_type -1 208 1 369 269 19 113 chr20 33226990 33227150 -38926732 + LTR67 LTR ERVL 26 170 -387 187 185 0 185 chr20 33227177 33227296 -38926586 - L2 LINE L2 -2786 528 432 311 207 49 12 chr20 33227340 33227422 -38926460 + LTR67 LTR ERVL 448 532 -25 636 212 9 0 chr20 33227871 33227984 -38925898 + MER81 DNA DNA 1 114 0 2022 120 0 17 chr20 33228099 33228399 -38925483 + AluSx SINE Alu 1 295 -17 362 189 8 71 chr20 33228399 33228526 -38925356 - L1MC/D LINE L1 -2376 5432 5314 1133 94 33 0 chr20 33228536 33228717 -38925165 - L1MA4A LINE L1 -16 6287 6101 400 256 55 75 chr20 33228726 33228925 -38924957 + HAL1 LINE L1 2 196 -2311 2101 227 75 81 chr20 33228996 33229183 -38924699 + HAL1 LINE L1 1100 1287 -1220 1545 166 55 0 chr20 33229183 33229454 -38924428 + AluJo SINE Alu 11 296 -16 2101 227 75 81 chr20 33229454 33229763 -38924119 + HAL1 LINE L1 1287 1596 -911 2097 113 0 19 chr20 33229763 33230073 -38923809 - AluSx SINE Alu -8 304 1 2101 227 75 81 chr20 33230073 33230397 -38923485 + HAL1 LINE L1 1596 1917 -590 1960 139 0 13 chr20 33230397 33230714 -38923168 - AluSq SINE Alu 0 313 1 2101 227 75 81 chr20 33230714 33230865 -38923017 + HAL1 LINE L1 1917 2067 -440 24 0 0 0 chr20 33230895 33230919 -38922963 + AT_rich Low_complexity Low_complexity 1 24 0 653 223 130 16 chr20 33230931 33231115 -38922767 - MLT1J2 LTR MaLR -245 205 1 394 239 54 54 chr20 33231161 33231291 -38922591 - L2 LINE L2 0 3313 3184 368 241 78 129 chr20 33231380 33231457 -38922425 - L2 LINE L2 -527 2787 2708 279 0 0 0 chr20 33231457 33231488 -38922394 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 368 241 78 129 chr20 33231488 33231501 -38922381 - L2 LINE L2 -606 2708 2696 2077 71 7 7 chr20 33231501 33231784 -38922098 - AluSx SINE Alu -29 283 1 368 241 78 129 chr20 33231784 33231924 -38921958 - L2 LINE L2 -618 2696 2568 183 0 71 0 chr20 33232109 33232137 -38921745 - MIR SINE MIR -123 139 110 381 22 0 0 chr20 33232417 33232463 -38921419 + (CCG)n Simple_repeat Simple_repeat 2 47 0 383 281 85 12 chr20 33232765 33232929 -38920953 + MIR SINE MIR 35 210 -52 472 239 223 0 chr20 33232977 33233161 -38920721 + MIR SINE MIR 20 244 -18 376 251 0 45 chr20 33233505 33233635 -38920247 - MIR SINE MIR -50 212 91 2114 113 3 0 chr20 33233640 33233941 -38919941 - AluSx SINE Alu -10 302 1 2249 81 7 0 chr20 33234186 33234482 -38919400 - AluSp SINE Alu -15 298 1 295 263 25 0 chr20 33234508 33234588 -38919294 + MIR3 SINE MIR 109 190 -18 387 235 69 64 chr20 33234594 33234730 -38919152 + MIR SINE MIR 14 156 -52 392 167 0 160 chr20 33234766 33234910 -38918972 + MIR SINE MIR 98 218 -44 2403 68 0 3 chr20 33235153 33235463 -38918419 + AluY SINE Alu 3 311 0 272 311 95 37 chr20 33235877 33236067 -38917815 - MIR SINE MIR -54 208 8 444 272 75 23 chr20 33236078 33236251 -38917631 - L2 LINE L2 -4 3309 3128 1401 130 0 14 chr20 33236253 33236468 -38917414 + AluSg/x SINE Alu 99 310 0 1404 263 79 46 chr20 33236469 33237140 -38916742 - L2 LINE L2 -261 3052 2345 29 0 0 0 chr20 33237736 33237765 -38916117 + AT_rich Low_complexity Low_complexity 1 29 0 1168 172 39 77 chr20 33237767 33237942 -38915940 - AluJo SINE Alu -25 287 107 2331 78 0 0 chr20 33237942 33238236 -38915646 + AluSg SINE Alu 1 294 -16 2075 133 0 0 chr20 33238246 33238540 -38915342 + AluSx SINE Alu 1 294 -18 1168 172 39 77 chr20 33238540 33238638 -38915244 - AluJo SINE Alu -214 98 14 1669 140 6 80 chr20 33238643 33238957 -38914925 - AluJo SINE Alu -21 291 1 227 299 37 47 chr20 33238992 33239099 -38914783 - MIR SINE MIR -52 210 105 254 246 152 105 chr20 33239154 33239225 -38914657 + MER5A DNA MER1_type 4 70 -119 771 166 0 43 chr20 33239225 33239364 -38914518 + FLAM_C SINE Alu 1 133 0 254 246 152 105 chr20 33239364 33239463 -38914419 + MER5A DNA MER1_type 70 182 -7 405 200 150 58 chr20 33239549 33239669 -38914213 - MIR SINE MIR -35 227 97 409 235 72 78 chr20 33240270 33240436 -38913446 + MIR3 SINE MIR 22 186 -22 339 230 71 8 chr20 33241293 33241419 -38912463 - L1ME4a LINE L1 -2 6119 5986 286 276 8 90 chr20 33241479 33241613 -38912269 - L1ME4a LINE L1 -359 5762 5640 891 140 0 0 chr20 33241894 33242030 -38911852 - FLAM_C SINE Alu -3 140 5 1634 195 3 0 chr20 33242036 33242334 -38911548 - AluJo SINE Alu -8 304 6 2305 97 0 0 chr20 33242591 33242899 -38910983 - AluSg SINE Alu -2 308 1 1661 163 24 17 chr20 33242925 33243220 -38910662 + AluJo SINE Alu 1 297 -15 328 69 414 0 chr20 33243440 33243498 -38910384 - AluSc SINE Alu -25 274 193 1510 218 63 32 chr20 33243765 33243916 -38909966 - MER113 DNA MER1_type? -27 494 349 2117 105 14 0 chr20 33243916 33244210 -38909672 - AluSg1 SINE Alu -11 298 1 1510 218 63 32 chr20 33244210 33244499 -38909383 - MER113 DNA MER1_type? -172 349 40 315 235 92 42 chr20 33244547 33244666 -38909216 + MIR SINE MIR 20 144 -118 421 267 24 79 chr20 33244712 33244831 -38909051 - MIR SINE MIR -71 191 82 1857 105 52 3 chr20 33244831 33245117 -38908765 + AluSx SINE Alu 1 300 -12 421 267 24 79 chr20 33245117 33245162 -38908720 - MIR SINE MIR -180 82 36 2617 119 36 43 chr20 33245227 33245307 -38908575 + L1MB2 LINE L1 5706 5785 -386 1892 140 7 26 chr20 33245307 33245614 -38908268 + AluJo SINE Alu 1 301 -11 2617 119 36 43 chr20 33245614 33246002 -38907880 + L1MB2 LINE L1 5785 6171 0 586 221 118 79 chr20 33246034 33246336 -38907546 - L1MC5 LINE L1 -32 7929 7640 2198 104 0 3 chr20 33246336 33246635 -38907247 - AluSx SINE Alu -14 298 1 1574 152 0 81 chr20 33246638 33246948 -38906934 - AluJo SINE Alu -17 295 11 586 221 118 79 chr20 33246948 33247007 -38906875 - L1MC5 LINE L1 -322 7639 7550 587 164 0 49 chr20 33247053 33247175 -38906707 + AluJo SINE Alu 22 137 -175 1545 145 3 71 chr20 33247176 33247486 -38906396 + AluJb SINE Alu 3 291 -21 385 305 26 13 chr20 33247530 33247681 -38906201 + L1MC/D LINE L1 5621 5773 -2035 1742 162 16 7 chr20 33247691 33247970 -38905912 + AluSx SINE Alu 1 285 -27 228 67 0 0 chr20 33247970 33248000 -38905882 + (TGAA)n Simple_repeat Simple_repeat 3 32 0 1742 162 16 7 chr20 33248000 33248029 -38905853 + AluSx SINE Alu 285 312 0 1360 182 19 56 chr20 33248034 33248358 -38905524 + AluJb SINE Alu 1 312 0 513 322 49 5 chr20 33248596 33248801 -38905081 + MIR SINE MIR 8 221 -41 588 305 64 26 chr20 33249258 33249491 -38904391 - MIR SINE MIR -4 258 17 673 279 71 20 chr20 33249557 33249908 -38903974 - L1MC4a LINE L1 -1893 5915 5547 2324 71 0 3 chr20 33250014 33250311 -38903571 - AluY SINE Alu -15 296 1 2169 101 0 13 chr20 33250573 33250881 -38903001 - AluSc SINE Alu -5 304 1 300 258 23 91 chr20 33250988 33251073 -38902809 - L1MC4a LINE L1 -1619 6189 6115 1644 129 19 0 chr20 33251073 33251329 -38902553 + AluSx SINE Alu 35 295 -17 300 258 23 91 chr20 33251329 33251375 -38902507 - L1MC4a LINE L1 -1693 6115 6067 337 271 132 14 chr20 33252057 33252201 -38901681 - L1ME4a LINE L1 -2 6119 5959 238 329 0 0 chr20 33252354 33252424 -38901458 - Charlie8 DNA MER1_type -4 2413 2344 2063 101 14 10 chr20 33252544 33252841 -38901041 + AluSp SINE Alu 1 298 -15 1597 163 30 3 chr20 33252874 33253169 -38900713 + AluSx SINE Alu 1 303 -9 261 83 0 0 chr20 33253374 33253410 -38900472 + (TCCCC)n Simple_repeat Simple_repeat 1 36 0 1163 210 90 22 chr20 33253410 33253677 -38900205 - AluJo SINE Alu -13 289 5 930 229 22 18 chr20 33253829 33254052 -38899830 - MER58A DNA MER1_type 0 224 1 225 0 0 0 chr20 33254098 33254123 -38899759 + (TA)n Simple_repeat Simple_repeat 1 25 0 1913 137 3 7 chr20 33254123 33254430 -38899452 - AluSx SINE Alu -6 306 1 367 228 10 134 chr20 33254436 33254506 -38899376 - L1ME4a LINE L1 -364 5798 5721 1505 177 46 0 chr20 33254506 33254788 -38899094 - AluJo SINE Alu -11 301 7 405 0 0 0 chr20 33254793 33254838 -38899044 + (TTTTG)n Simple_repeat Simple_repeat 3 47 0 1429 152 7 79 chr20 33254840 33255004 -38898878 - AluJo SINE Alu -31 281 147 2003 90 7 14 chr20 33255004 33255294 -38898588 - AluY SINE Alu -20 291 4 1429 152 7 79 chr20 33255294 33255432 -38898450 - AluJo SINE Alu -165 147 1 367 228 10 134 chr20 33255432 33255554 -38898328 - L1ME4a LINE L1 -446 5716 5622 288 0 0 0 chr20 33255558 33255590 -38898292 + (TTG)n Simple_repeat Simple_repeat 2 33 0 911 175 18 6 chr20 33255625 33255796 -38898086 - AluJo SINE Alu -53 259 87 1944 97 90 0 chr20 33255804 33256083 -38897799 - AluSx SINE Alu -8 304 1 2000 123 3 0 chr20 33256088 33256395 -38897487 - AluSq SINE Alu 0 308 1 1264 73 141 29 chr20 33257626 33257832 -38896050 - MER30 DNA MER1_type -1 229 1 2049 107 7 0 chr20 33258005 33258294 -38895588 + AluSx SINE Alu 5 295 -17 2024 117 43 0 chr20 33258304 33258603 -38895279 + AluSq SINE Alu 1 312 -1 440 230 96 41 chr20 33259112 33259318 -38894564 + L1MC/D LINE L1 5583 5814 -307 261 0 0 0 chr20 33259514 33259543 -38894339 + (GA)n Simple_repeat Simple_repeat 2 30 0 2117 96 0 34 chr20 33259577 33259899 -38893983 + AluSx SINE Alu 1 311 -1 981 161 0 12 chr20 33259931 33260092 -38893790 + AluJb SINE Alu 134 292 -20 1928 103 32 32 chr20 33260289 33260600 -38893282 - AluSx SINE Alu -1 311 1 1151 117 0 0 chr20 33260664 33260826 -38893056 + AluSq SINE Alu 143 304 -9 2143 95 0 10 chr20 33260832 33261127 -38892755 + AluSc SINE Alu 2 293 -16 2302 87 0 16 chr20 33261300 33261611 -38892271 - AluSc SINE Alu -3 306 1 1422 143 22 0 chr20 33261767 33261997 -38891885 - L1MC1 LINE L1 0 6333 6099 952 258 120 9 chr20 33262016 33262342 -38891540 - L1MC1 LINE L1 -1898 5910 5549 1841 103 46 0 chr20 33262405 33262667 -38891215 + AluY SINE Alu 38 311 0 1923 123 0 7 chr20 33262681 33262966 -38890916 + AluY SINE Alu 11 293 -18 1356 148 8 66 chr20 33262966 33263111 -38890771 - AluJo SINE Alu -36 276 124 1842 154 0 19 chr20 33263111 33263429 -38890453 - AluSx SINE Alu 0 312 1 2267 73 33 0 chr20 33263433 33263733 -38890149 - AluY SINE Alu -1 310 1 1478 198 0 51 chr20 33263738 33264051 -38889831 - AluJb SINE Alu -15 297 1 1356 148 8 66 chr20 33264051 33264151 -38889731 - AluJo SINE Alu -195 117 35 225 178 0 0 chr20 33265674 33265719 -38888163 + GA-rich Low_complexity Low_complexity 1 45 0 2589 7 0 7 chr20 33266154 33266449 -38887433 + AluYa5 SINE Alu 19 311 0 2246 98 0 0 chr20 33266515 33266821 -38887061 - AluSq SINE Alu -7 306 1 1799 139 40 7 chr20 33266821 33267123 -38886759 - AluJb SINE Alu 0 312 1 818 277 203 5 chr20 33267275 33267719 -38886163 - L1ME3A LINE L1 -232 5938 5407 298 195 13 39 chr20 33267720 33267797 -38886085 - L1ME1 LINE L1 -107 6059 5985 1725 155 7 7 chr20 33268420 33268722 -38885160 - AluJb SINE Alu 0 306 5 2241 101 0 0 chr20 33268976 33269274 -38884608 + AluSx SINE Alu 1 298 -14 273 149 43 0 chr20 33269320 33269367 -38884515 - MIR3 SINE MIR -48 160 112 318 303 181 39 chr20 33269461 33269970 -38883912 + L2 LINE L2 2193 2773 -541 1510 177 7 39 chr20 33270143 33270448 -38883434 + AluJo SINE Alu 1 295 -17 190 321 222 0 chr20 33270543 33270624 -38883258 + L2 LINE L2 3124 3222 -50 1973 119 31 3 chr20 33271672 33271966 -38881916 + AluSx SINE Alu 1 302 -10 252 261 120 0 chr20 33272025 33272117 -38881765 + MIR3 SINE MIR 91 193 -15 226 191 48 48 chr20 33272205 33272268 -38881614 - L1MC4 LINE L1 -42 8000 7938 1777 177 0 10 chr20 33272360 33272659 -38881223 - AluJo SINE Alu -16 296 1 4188 158 18 72 chr20 33272669 33272741 -38881141 - L1MB8 LINE L1 -1 6177 6103 2179 100 3 3 chr20 33272741 33273042 -38880840 + AluSx SINE Alu 3 303 -9 4188 158 18 72 chr20 33273042 33273678 -38880204 - L1MB8 LINE L1 -75 6103 5527 1818 163 7 0 chr20 33273678 33273979 -38879903 - AluJb SINE Alu -9 303 1 4188 158 18 72 chr20 33273979 33274192 -38879690 - L1MB8 LINE L1 -651 5527 5304 276 174 0 35 chr20 33274193 33274279 -38879603 + (TA)n Simple_repeat Simple_repeat 1 83 0 2283 120 0 0 chr20 33274292 33274604 -38879278 - AluSx SINE Alu -3 309 1 2269 107 0 0 chr20 33274623 33274913 -38878969 - AluSx SINE Alu -22 290 1 431 289 10 30 chr20 33274913 33275114 -38878768 - L1MB8 LINE L1 -857 5289 5093 285 122 22 133 chr20 33275106 33275196 -38878686 - L1MB5 LINE L1 -215 5959 5880 * 237 65 0 0 chr20 33275200 33275231 -38878651 + (TG)n Simple_repeat Simple_repeat 2 32 0 987 206 23 19 chr20 33275239 33275453 -38878429 - AluJo SINE Alu -14 298 84 1226 144 14 9 chr20 33275453 33275675 -38878207 - L1MB5 LINE L1 -314 5870 5648 * 1850 183 27 29 chr20 33275664 33275866 -38878016 - L1MB8 LINE L1 -1088 5058 4857 2352 100 3 0 chr20 33275866 33276165 -38877717 + AluSx SINE Alu 1 300 -12 1850 183 27 29 chr20 33276165 33276371 -38877511 - L1MB8 LINE L1 -1289 4857 4651 933 185 0 6 chr20 33276372 33276529 -38877353 + Tigger1 DNA MER2_type 1 156 -2262 * 1275 121 48 5 chr20 33276519 33276726 -38877156 + Tigger1 DNA MER2_type 2202 2417 -1 1423 196 28 3 chr20 33276727 33277044 -38876838 - L1MB8 LINE L1 -1495 4651 4327 2338 86 3 0 chr20 33277045 33277336 -38876546 + AluSx SINE Alu 1 292 -20 972 123 0 0 chr20 33277339 33277711 -38876171 + (TA)n Simple_repeat Simple_repeat 1 372 0 669 216 22 27 chr20 33277713 33277898 -38875984 - L1M4 LINE L1 -1025 5121 4938 873 147 3 3 chr20 33278004 33278303 -38875579 + (TA)n Simple_repeat Simple_repeat 1 300 0 1227 124 0 21 chr20 33278490 33278683 -38875199 - AluSc SINE Alu -3 306 118 2251 94 7 3 chr20 33278695 33278982 -38874900 + AluSq SINE Alu 1 288 -25 1129 157 0 0 chr20 33279059 33279231 -38874651 + FRAM SINE Alu 1 170 -6 483 144 122 0 chr20 33279335 33279425 -38874457 - MER5B DNA MER1_type -4 174 74 852 192 40 0 chr20 33279425 33279602 -38874280 - MER5A DNA MER1_type 0 189 6 265 286 13 0 chr20 33279604 33279681 -38874201 - MER5B DNA MER1_type -94 84 7 299 123 0 53 chr20 33279699 33279756 -38874126 - L1MC5 LINE L1 -737 7224 7171 1966 151 0 7 chr20 33279845 33280137 -38873745 + AluSx SINE Alu 1 290 -22 366 209 35 61 chr20 33280182 33280279 -38873603 + L1ME4a LINE L1 5954 6049 -72 2087 146 0 3 chr20 33280279 33280588 -38873294 - AluSx SINE Alu -4 308 1 366 209 35 61 chr20 33280588 33280605 -38873277 + L1ME4a LINE L1 6049 6065 -56 2278 119 7 0 chr20 33280754 33281064 -38872818 - AluSq SINE Alu -1 312 1 1871 176 0 3 chr20 33282915 33283227 -38870655 + AluJb SINE Alu 1 311 -1 2303 105 0 6 chr20 33283239 33283553 -38870329 + AluSx SINE Alu 1 312 0 1297 70 0 41 chr20 33283553 33283724 -38870158 + AluSg/x SINE Alu 131 294 -16 29 0 0 0 chr20 33283986 33284015 -38869867 + AT_rich Low_complexity Low_complexity 1 29 0 2049 138 0 0 chr20 33284015 33284305 -38869577 - AluSx SINE Alu -22 290 1 1146 52 8 0 chr20 33284305 33284439 -38869443 - AluSq/x SINE Alu -178 135 1 868 179 0 0 chr20 33284439 33284584 -38869298 - FRAM SINE Alu -4 172 28 181 282 0 0 chr20 33284597 33284636 -38869246 - L2 LINE L2 -24 3248 3210 243 273 78 7 chr20 33284769 33284923 -38868959 + L1ME4a LINE L1 5954 6118 -3 504 327 13 26 chr20 33285689 33285915 -38867967 - MIR SINE MIR -33 229 7 222 286 0 16 chr20 33286701 33286764 -38867118 + CT-rich Low_complexity Low_complexity 2 63 0 2330 117 0 0 chr20 33288448 33288756 -38865126 + AluSx SINE Alu 1 308 -4 1960 116 29 0 chr20 33290254 33290562 -38863320 + AluSx SINE Alu 1 316 0 1191 161 75 0 chr20 33290751 33290950 -38862932 - AluJb SINE Alu -17 295 82 531 306 68 15 chr20 33291094 33291337 -38862545 + MIR SINE MIR 8 259 -3 431 284 52 84 chr20 33291458 33291646 -38862236 - L2 LINE L2 -16 3297 3126 1738 165 10 20 chr20 33291646 33291943 -38861939 - AluJb SINE Alu -8 304 11 431 284 52 84 chr20 33291943 33292135 -38861747 - L2 LINE L2 -187 3126 2929 2347 87 3 26 chr20 33292509 33292821 -38861061 + AluSp SINE Alu 2 306 -7 193 291 36 0 chr20 33293319 33293374 -38860508 - L2 LINE L2 -13 3259 3203 462 269 18 58 chr20 33293469 33293692 -38860190 + L2 LINE L2 2837 3050 -222 1517 101 43 5 chr20 33293718 33293927 -38859955 - AluY SINE Alu -94 217 1 835 197 0 0 chr20 33293943 33294080 -38859802 + FRAM SINE Alu 1 132 -44 611 269 131 56 chr20 33294892 33295243 -38858639 - L2 LINE L2 0 3313 2923 2341 111 0 0 chr20 33295243 33295541 -38858341 + AluSx SINE Alu 1 298 -14 611 269 131 56 chr20 33295541 33295616 -38858266 - L2 LINE L2 -390 2923 2855 376 221 113 155 chr20 33295653 33295988 -38857894 - L2 LINE L2 -562 2752 2432 2199 91 0 0 chr20 33296012 33296275 -38857607 - AluSg SINE Alu -47 263 1 692 146 42 130 chr20 33296318 33296337 -38857545 - L1MB8 LINE L1 -7 6171 6152 2235 148 9 0 chr20 33296337 33296682 -38857200 - MER7A DNA MER2_type 0 346 1 692 146 42 130 chr20 33296682 33296782 -38857100 - L1MB8 LINE L1 -26 6152 6045 2289 103 3 0 chr20 33296782 33297082 -38856800 - AluSx SINE Alu -11 301 1 692 146 42 130 chr20 33297082 33297109 -38856773 - L1MB8 LINE L1 -133 6045 6017 2101 139 0 3 chr20 33297109 33297410 -38856472 + AluSx SINE Alu 1 300 -12 692 146 42 130 chr20 33297410 33297500 -38856382 - L1MB8 LINE L1 -161 6017 5954 280 313 15 37 chr20 33297718 33297852 -38856030 + MIR SINE MIR 14 144 -118 649 156 9 9 chr20 33297865 33297974 -38855908 - Tigger3(Golem) DNA MER2_type 0 3037 2929 274 50 0 0 chr20 33298003 33298043 -38855839 - AluJo SINE Alu -1 301 262 974 146 0 13 chr20 33298044 33298202 -38855680 - AluJo SINE Alu -102 210 55 1741 164 49 23 chr20 33298324 33298628 -38855254 - AluJo SINE Alu 0 312 1 479 171 40 0 chr20 33298644 33298720 -38855162 - Tigger3(Golem) DNA MER2_type -2949 80 2 198 284 30 15 chr20 33298738 33298805 -38855077 + MIR SINE MIR 189 256 -6 352 280 34 0 chr20 33298918 33299041 -38854841 + MIR SINE MIR 43 166 -54 1525 150 6 73 chr20 33299041 33299138 -38854744 + AluJo SINE Alu 1 103 -209 2470 45 25 0 chr20 33299138 33299449 -38854433 + AluY SINE Alu 1 318 0 1525 150 6 73 chr20 33299449 33299663 -38854219 + AluJo SINE Alu 103 292 -20 239 224 206 47 chr20 33299704 33299811 -38854071 - L2 LINE L2 -22 3291 3168 212 267 17 0 chr20 33300107 33300167 -38853715 - L2 LINE L2 -9 3263 3203 316 217 66 47 chr20 33300834 33300940 -38852942 + MIR SINE MIR 93 200 -62 1090 170 0 75 chr20 33301014 33301225 -38852657 - AluJb SINE Alu -6 306 114 2270 100 7 0 chr20 33301225 33301516 -38852366 + AluSg SINE Alu 5 297 -13 1090 170 0 75 chr20 33301516 33301545 -38852337 - AluJb SINE Alu -198 114 84 274 252 76 23 chr20 33301553 33301684 -38852198 - L1ME4a LINE L1 -6 6115 5978 354 312 60 38 chr20 33301709 33302026 -38851856 - L1MC4a LINE L1 -1897 5911 5588 2277 82 38 0 chr20 33302027 33302318 -38851564 - AluSp SINE Alu -11 302 1 906 107 0 16 chr20 33302335 33302456 -38851426 - FLAM_C SINE Alu -16 127 9 672 269 74 37 chr20 33302516 33302784 -38851098 - L1MC4a LINE L1 -736 5561 5329 2432 96 0 0 chr20 33302784 33303096 -38850786 - AluSx SINE Alu 0 312 1 672 269 74 37 chr20 33303096 33303114 -38850768 - L1MC4a LINE L1 -968 5329 5313 416 359 51 8 chr20 33303199 33303553 -38850329 - L1MC4a LINE L1 -1099 5047 4679 937 282 0 8 chr20 33303553 33303808 -38850074 + MIR SINE MIR 2 254 -8 332 340 75 4 chr20 33303840 33304093 -38849789 - L1MC4a LINE L1 -1487 4659 4389 2214 110 3 0 chr20 33304109 33304399 -38849483 - AluSx SINE Alu -21 291 1 1630 206 3 3 chr20 33304504 33304791 -38849091 - AluJo SINE Alu -25 287 1 839 165 0 0 chr20 33304814 33305036 -38848846 - FLAM_C SINE Alu 0 222 1 205 158 92 79 chr20 33305273 33305349 -38848533 + L2 LINE L2 3173 3249 -23 369 178 0 0 chr20 33306313 33306386 -38847496 + LTR30 LTR ERV1 552 624 -98 216 289 0 0 chr20 33306548 33306600 -38847282 + MIR SINE MIR 49 100 -162 1387 182 244 100 chr20 33306759 33306826 -38847056 - MLT1F LTR MaLR -2 540 484 2168 114 0 22 chr20 33306826 33307143 -38846739 + AluSg SINE Alu 1 310 0 1387 182 244 100 chr20 33307143 33307547 -38846335 - MLT1F LTR MaLR -58 484 1 208 287 41 16 chr20 33307891 33308013 -38845869 + L3b LINE CR1 1292 1416 -167 27 0 0 0 chr20 33308153 33308180 -38845702 + AT_rich Low_complexity Low_complexity 1 27 0 235 206 152 0 chr20 33308222 33308314 -38845568 - L1ME4a LINE L1 0 6121 6016 1855 151 32 3 chr20 33308384 33308668 -38845214 + AluSx SINE Alu 1 292 -20 1818 132 0 51 chr20 33308681 33308976 -38844906 + AluJo SINE Alu 13 292 -20 845 219 12 0 chr20 33309038 33309198 -38844684 + FRAM SINE Alu 1 162 -4 1085 132 0 0 chr20 33309355 33309499 -38844383 - FRAM SINE Alu -33 143 1 353 197 99 0 chr20 33309670 33309741 -38844141 - L2 LINE L2 -2 3270 3193 213 250 62 0 chr20 33309887 33309951 -38843931 + MIR SINE MIR 87 154 -108 434 272 112 19 chr20 33310075 33310281 -38843601 - MIR SINE MIR -13 249 25 2010 210 64 67 chr20 33310836 33311380 -38842502 - MLT1E2 LTR MaLR 0 626 82 2066 96 0 0 chr20 33311380 33311664 -38842218 + AluSx SINE Alu 25 308 0 2010 210 64 67 chr20 33311664 33311746 -38842136 - MLT1E2 LTR MaLR -544 82 1 239 296 56 0 chr20 33312293 33312401 -38841481 - MIR SINE MIR -82 180 67 198 273 0 0 chr20 33312393 33312437 -38841445 - MIR SINE MIR 0 262 219 * 269 262 146 10 chr20 33312547 33312650 -38841232 - MIR SINE MIR -125 137 21 212 273 11 11 chr20 33313667 33313755 -38840127 + C-rich Low_complexity Low_complexity 6 93 0 195 133 33 17 chr20 33313756 33313816 -38840066 + (CCG)n Simple_repeat Simple_repeat 2 62 0 21 0 0 0 chr20 33314137 33314158 -38839724 + GC_rich Low_complexity Low_complexity 1 21 0 415 286 28 22 chr20 33314477 33314659 -38839223 - MER5A DNA MER1_type 0 189 7 182 37 37 0 chr20 33315968 33315995 -38837887 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 1203 81 7 0 chr20 33315995 33316144 -38837738 - AluSp SINE Alu -163 150 1 1248 172 44 24 chr20 33316199 33316449 -38837433 + AluJo SINE Alu 36 290 -22 2241 108 13 0 chr20 33316455 33316761 -38837121 + AluSg SINE Alu 1 310 0 2309 83 17 10 chr20 33316881 33317183 -38836699 + AluSx SINE Alu 1 304 -8 2514 53 0 25 chr20 33317452 33317771 -38836111 + AluY SINE Alu 1 311 0 244 195 169 0 chr20 33318647 33318724 -38835158 - MER94 DNA DNA -35 99 10 400 218 0 45 chr20 33318738 33318848 -38835034 - L2 LINE L2 -181 3091 2987 223 267 105 0 chr20 33319051 33319137 -38834745 - MIR SINE MIR -19 243 149 1868 159 0 7 chr20 33319325 33319615 -38834267 - AluJb SINE Alu -24 288 1 906 174 35 35 chr20 33319622 33319794 -38834088 - FAM SINE Alu -3 172 1 344 226 132 0 chr20 33319861 33319967 -38833915 + L2 LINE L2 3192 3311 -2 328 323 69 39 chr20 33320054 33320416 -38833466 - L2 LINE L2 -814 2500 2128 354 70 0 0 chr20 33320510 33320553 -38833329 - 5S rRNA rRNA -78 43 1 766 103 162 0 chr20 33320959 33321076 -38832806 + AluSq/x SINE Alu 2 137 -175 2006 121 16 22 chr20 33322193 33322507 -38831375 + AluSx SINE Alu 1 312 0 28 61 0 0 chr20 33323755 33323804 -38830078 + AT_rich Low_complexity Low_complexity 1 49 0 281 248 8 57 chr20 33324248 33324349 -38829533 - MER5A DNA MER1_type 0 189 40 2200 107 0 17 chr20 33324349 33324649 -38829233 - AluSx SINE Alu -17 295 1 281 248 8 57 chr20 33324649 33324680 -38829202 - MER5A DNA MER1_type -149 40 9 2288 103 27 0 chr20 33324816 33325116 -38828766 - AluSg SINE Alu -2 308 1 1026 169 33 107 chr20 33325364 33325606 -38828276 - MER58A DNA MER1_type 0 224 1 1373 151 111 33 chr20 33325966 33326237 -38827645 + AluJo SINE Alu 1 292 -20 1806 176 0 3 chr20 33326395 33326684 -38827198 - AluJb SINE Alu -24 288 1 30 0 0 0 chr20 33326684 33326714 -38827168 + AT_rich Low_complexity Low_complexity 1 30 0 1401 196 50 21 chr20 33326714 33326994 -38826888 - AluJo SINE Alu -24 288 1 23 68 0 0 chr20 33327033 33327077 -38826805 + AT_rich Low_complexity Low_complexity 1 44 0 350 231 192 8 chr20 33327522 33327652 -38826230 + L2 LINE L2 3160 3313 0 2234 120 0 0 chr20 33327690 33327990 -38825892 - AluSg SINE Alu -10 300 1 847 118 15 15 chr20 33328032 33328167 -38825715 - FLAM_C SINE Alu -1 142 8 2280 97 0 0 chr20 33328192 33328480 -38825402 + AluSq SINE Alu 1 288 -25 2067 116 27 3 chr20 33328682 33328975 -38824907 + AluSx SINE Alu 1 300 -12 1698 161 70 0 chr20 33329114 33329387 -38824495 - AluJb SINE Alu -16 296 5 1514 164 30 43 chr20 33329393 33329692 -38824190 - AluJo SINE Alu -17 295 1 614 146 127 0 chr20 33330022 33330132 -38823750 - MSTC LTR MaLR -1 427 304 765 114 57 0 chr20 33330132 33330237 -38823645 - AluSq/x SINE Alu -200 112 2 413 267 70 37 chr20 33330238 33330281 -38823601 - L1MC4 LINE L1 -190 7852 7812 2002 106 62 3 chr20 33330281 33330573 -38823309 + AluSx SINE Alu 1 309 -3 413 267 70 37 chr20 33330573 33330716 -38823166 - L1MC4 LINE L1 -230 7812 7660 1814 158 3 7 chr20 33330764 33331080 -38822802 - AluJb SINE Alu 0 316 2 343 0 0 41 chr20 33331320 33331369 -38822513 + (TTTTA)n Simple_repeat Simple_repeat 2 48 0 2150 112 0 3 chr20 33331387 33331673 -38822209 - AluSx SINE Alu -27 285 1 209 84 76 34 chr20 33331869 33331988 -38821894 + (TA)n Simple_repeat Simple_repeat 1 124 0 565 96 14 0 chr20 33332053 33332126 -38821756 + AluS SINE Alu 2 75 -238 385 105 86 0 chr20 33332144 33332306 -38821576 + (TA)n Simple_repeat Simple_repeat 2 177 0 528 110 14 0 chr20 33332308 33332381 -38821501 - AluS SINE Alu -237 75 2 1583 167 104 27 chr20 33332571 33332749 -38821133 - MER46B DNA MER2_type -2495 236 73 2274 113 0 0 chr20 33332749 33333050 -38820832 - AluSx SINE Alu -11 301 1 1583 167 104 27 chr20 33333050 33333070 -38820812 - MER46B DNA MER2_type -2658 73 56 279 0 0 0 chr20 33333070 33333101 -38820781 + (TG)n Simple_repeat Simple_repeat 2 32 0 1598 189 29 7 chr20 33333101 33333256 -38820626 - AluJb SINE Alu -26 286 121 333 0 0 0 chr20 33333256 33333293 -38820589 + (TG)n Simple_repeat Simple_repeat 2 38 0 1598 189 29 7 chr20 33333293 33333417 -38820465 - AluJb SINE Alu -191 121 1 1583 167 104 27 chr20 33333417 33333551 -38820331 - MER46B DNA MER2_type -2674 57 1 1586 99 5 18 chr20 33333943 33334164 -38819718 + AluSq SINE Alu 1 218 -95 2109 153 0 3 chr20 33334270 33334458 -38819424 - AluSx SINE Alu 0 312 124 207 0 0 0 chr20 33334458 33334481 -38819401 + (TTA)n Simple_repeat Simple_repeat 2 24 0 2109 153 0 3 chr20 33334481 33334605 -38819277 - AluSx SINE Alu -188 124 1 2280 105 0 0 chr20 33334641 33334945 -38818937 + AluSx SINE Alu 1 304 -8 21 57 0 0 chr20 33335053 33335088 -38818794 + AT_rich Low_complexity Low_complexity 1 35 0 2123 100 7 20 chr20 33335097 33335396 -38818486 + AluSq SINE Alu 1 295 -18 1588 185 27 7 chr20 33335568 33335866 -38818016 + AluJo SINE Alu 2 305 -7 298 161 0 36 chr20 33335989 33336045 -38817837 + L2 LINE L2 2681 2734 -580 345 346 0 44 chr20 33336071 33336207 -38817675 + L2 LINE L2 2842 2971 -343 200 158 26 0 chr20 33336217 33336255 -38817627 + L2 LINE L2 3268 3306 -7 1739 179 18 0 chr20 33336313 33336598 -38817284 - AluJb SINE Alu -22 290 1 2595 53 0 0 chr20 33336611 33336911 -38816971 - AluY SINE Alu -11 300 1 2026 114 3 60 chr20 33337040 33337372 -38816510 - AluSp SINE Alu 0 313 1 1769 144 3 52 chr20 33337586 33337891 -38815991 + AluJb SINE Alu 1 290 -22 324 301 52 39 chr20 33337992 33338145 -38815737 - MIR3 SINE MIR -6 202 48 2473 56 0 7 chr20 33338400 33338705 -38815177 - AluY SINE Alu -8 303 1 2130 111 37 0 chr20 33339296 33339593 -38814289 - AluSx SINE Alu -4 308 1 539 307 141 49 chr20 33340733 33341307 -38812575 + L2 LINE L2 2557 3267 -5 2035 144 0 0 chr20 33341523 33341815 -38812067 - AluSx SINE Alu -20 292 1 381 213 147 93 chr20 33341815 33342040 -38811842 - HAL1 LINE L1 -985 1522 1286 1263 152 145 29 chr20 33342128 33342404 -38811478 + AluSx SINE Alu 1 308 -4 286 250 40 30 chr20 33342437 33342537 -38811345 - HAL1 LINE L1 -1599 908 808 1391 249 109 15 chr20 33342846 33343248 -38810634 + L2 LINE L2 2225 2664 -650 2055 127 0 3 chr20 33343266 33343573 -38810309 - AluSx SINE Alu 0 306 1 469 251 45 56 chr20 33343604 33343783 -38810099 - L1MEc LINE L1 -2258 3957 3781 25 0 0 0 chr20 33343975 33344000 -38809882 + AT_rich Low_complexity Low_complexity 1 25 0 419 305 66 47 chr20 33344266 33344584 -38809298 - L1ME3 LINE L1 -212 5950 5627 1946 119 65 0 chr20 33344688 33344965 -38808917 - AluSx SINE Alu -17 295 1 1739 158 56 6 chr20 33345110 33345433 -38808449 - MER47A DNA MER2_type 0 366 28 279 234 26 26 chr20 33345480 33345557 -38808325 - L1ME1 LINE L1 -25 6141 6065 22 0 0 0 chr20 33345565 33345587 -38808295 + AT_rich Low_complexity Low_complexity 1 22 0 829 177 27 0 chr20 33345587 33345734 -38808148 - FRAM SINE Alu -25 151 1 2242 231 28 54 chr20 33345734 33345981 -38807901 - L1ME1 LINE L1 -95 6140 5888 1836 157 27 7 chr20 33345981 33346275 -38807607 - AluJo SINE Alu 0 312 13 2242 231 28 54 chr20 33346275 33346580 -38807302 - L1ME1 LINE L1 -347 5888 5577 1788 173 3 16 chr20 33346580 33346886 -38806996 - AluJo SINE Alu -10 302 1 2242 231 28 54 chr20 33346886 33347208 -38806674 - L1ME1 LINE L1 -658 5577 2212 873 201 0 6 chr20 33347208 33347377 -38806505 - AluJo/FRAM SINE Alu -9 303 136 1998 107 11 0 chr20 33347379 33347649 -38806233 - AluSq SINE Alu -12 301 29 3175 227 110 55 chr20 33347743 33348578 -38805304 - L1MEc LINE L1 -3161 3054 2266 2188 108 0 0 chr20 33348578 33348865 -38805017 - AluSg SINE Alu -21 289 3 3175 227 110 55 chr20 33348865 33348924 -38804958 - L1MEc LINE L1 -3949 2266 2212 1964 140 7 19 chr20 33348924 33349094 -38804788 - AluSx SINE Alu -8 304 138 2395 88 0 3 chr20 33349094 33349399 -38804483 - AluSg SINE Alu -6 304 1 1964 140 7 19 chr20 33349399 33349536 -38804346 - AluSx SINE Alu -174 138 1 3175 227 110 55 chr20 33349536 33349816 -38804066 - L1MEc LINE L1 -4003 2212 1949 2073 136 0 0 chr20 33349816 33350111 -38803771 - AluSx SINE Alu -17 295 1 3175 227 110 55 chr20 33350111 33350898 -38802984 - L1MEc LINE L1 -4266 1949 973 2161 135 0 0 chr20 33350898 33351194 -38802688 - AluSx SINE Alu -14 298 3 3175 227 110 55 chr20 33351194 33351533 -38802349 - L1MEc LINE L1 -5242 973 654 223 350 44 22 chr20 33351664 33351801 -38802081 + L2 LINE L2 2595 2734 -580 743 56 64 30 chr20 33351980 33352119 -38801763 + MER30B DNA MER1_type 1 105 -85 1080 144 10 36 chr20 33352126 33352320 -38801562 - AluSg SINE Alu -3 309 121 868 153 0 0 chr20 33352366 33352497 -38801385 - AluSg SINE Alu -179 131 1 2054 114 13 10 chr20 33352497 33352796 -38801086 - AluSx SINE Alu -12 300 1 551 141 0 12 chr20 33352841 33352926 -38800956 + MER30B DNA MER1_type 147 230 0 464 167 44 0 chr20 33352985 33353075 -38800807 - L1MD3 LINE L1 -189 7806 7713 373 235 73 19 chr20 33353076 33353288 -38800594 - L1ME1 LINE L1 -263 5903 5796 243 73 49 0 chr20 33353265 33353306 -38800576 - L1MB5 LINE L1 0 6174 6132 * 856 120 0 15 chr20 33353306 33353439 -38800443 - AluSg/x SINE Alu -1 308 178 1246 202 24 12 chr20 33353439 33353686 -38800196 - L1MB5 LINE L1 -42 6132 5883 2741 256 111 45 chr20 33353686 33353697 -38800185 - L1MEc LINE L1 -4746 1650 1641 2766 23 0 0 chr20 33353697 33354006 -38799876 - AluYa5 SINE Alu -2 309 1 2741 256 111 45 chr20 33354006 33354053 -38799829 - L1MEc LINE L1 -4755 1641 1599 1767 125 107 4 chr20 33354053 33354325 -38799557 + AluSq SINE Alu 1 300 -13 2741 256 111 45 chr20 33354325 33354847 -38799035 - L1MEc LINE L1 -4797 1599 1113 2287 119 0 0 chr20 33354847 33355159 -38798723 - AluSx SINE Alu 0 312 1 2741 256 111 45 chr20 33355159 33356066 -38797816 - L1MEc LINE L1 -5283 1113 63 889 253 31 83 chr20 33356078 33356536 -38797346 - L1MD2 LINE L1 -2 6357 5924 1321 124 148 42 chr20 33356539 33356620 -38797262 - MER44D DNA MER2_type -1882 609 538 207 0 0 0 chr20 33356620 33356643 -38797239 + (TG)n Simple_repeat Simple_repeat 2 24 0 1321 124 148 42 chr20 33356643 33356659 -38797223 - MER44D DNA MER2_type -1953 538 525 2118 116 3 7 chr20 33356659 33356953 -38796929 - AluSx SINE Alu -19 293 1 1321 124 148 42 chr20 33356953 33357137 -38796745 - MER44D DNA MER2_type -1966 525 27 4268 224 57 48 chr20 33357145 33357341 -38796541 - L1MD2 LINE L1 -434 5925 5732 709 153 54 0 chr20 33357341 33357452 -38796430 - FLAM_C SINE Alu -16 117 1 4268 224 57 48 chr20 33357452 33358505 -38795377 - L1MD2 LINE L1 -627 5732 4690 1698 181 7 0 chr20 33358505 33358804 -38795078 - AluJo SINE Alu -3 309 9 4268 224 57 48 chr20 33358804 33358975 -38794907 - L1MD2 LINE L1 -1669 4690 4522 2660 134 26 0 chr20 33358975 33359394 -38794488 - L1MA4 LINE L1 -1 6299 5870 4268 224 57 48 chr20 33359394 33360004 -38793878 - L1MD2 LINE L1 -1837 4522 3879 355 166 165 9 chr20 33360006 33360131 -38793751 - L1ME LINE L1 -721 5443 5299 1807 219 77 44 chr20 33360182 33360223 -38793659 - L1MC4 LINE L1 -142 7900 7862 1399 147 191 8 chr20 33360223 33360475 -38793407 - AluJo SINE Alu -4 298 1 1807 219 77 44 chr20 33360475 33361003 -38792879 - L1MC4 LINE L1 -180 7862 7312 322 96 0 19 chr20 33361009 33361061 -38792821 - AluSp/q SINE Alu -11 292 242 846 277 112 10 chr20 33361096 33361363 -38792519 - L1MC4 LINE L1 -1249 6793 6490 1843 146 3 14 chr20 33361363 33361651 -38792231 + AluJb SINE Alu 1 285 -27 846 277 112 10 chr20 33361651 33361686 -38792196 - L1MC4 LINE L1 -1552 6490 6460 2020 125 0 27 chr20 33362161 33362458 -38791424 + AluSx SINE Alu 5 293 -19 1080 246 122 52 chr20 33362484 33362556 -38791326 - L1ME LINE L1 -874 5272 5206 1660 165 39 7 chr20 33362556 33362841 -38791041 - AluJb SINE Alu -8 304 11 180 0 0 0 chr20 33362843 33362863 -38791019 + (GCCTG)n Simple_repeat Simple_repeat 1 20 0 1080 246 122 52 chr20 33362863 33363042 -38790840 - L1ME LINE L1 -940 5206 5041 2042 125 17 3 chr20 33363042 33363331 -38790551 - AluSx SINE Alu -19 293 1 1080 246 122 52 chr20 33363331 33363648 -38790234 - L1ME LINE L1 -1105 5041 4660 861 194 17 6 chr20 33363648 33363828 -38790054 - AluJo SINE Alu -9 303 122 884 183 110 38 chr20 33363828 33364049 -38789833 - L1ME LINE L1 -1491 4655 4403 2161 103 6 31 chr20 33364049 33364370 -38789512 - AluSq SINE Alu 0 313 1 884 183 110 38 chr20 33364370 33364465 -38789417 - L1ME LINE L1 -1743 4403 4316 1619 216 104 43 chr20 33364505 33364690 -38789192 - L1MC4 LINE L1 -106 7936 7764 1106 171 6 6 chr20 33364690 33364860 -38789022 + FAM SINE Alu 1 170 -5 1619 216 104 43 chr20 33364860 33365249 -38788633 - L1MC4 LINE L1 -278 7764 7327 1581 139 67 84 chr20 33365269 33365403 -38788479 - MER44D DNA MER2_type -1882 609 474 685 215 0 30 chr20 33365403 33365538 -38788344 - AluJo SINE Alu -171 131 1 1581 139 67 84 chr20 33365538 33365748 -38788134 - MER44D DNA MER2_type -2017 474 1 2029 237 115 62 chr20 33365748 33365844 -38788038 - L1MC4a LINE L1 -607 7201 7112 2300 114 0 9 chr20 33365844 33366159 -38787723 + AluSx SINE Alu 1 312 0 2029 237 115 62 chr20 33366159 33366310 -38787572 - L1MC4a LINE L1 -696 7112 6970 2190 108 6 19 chr20 33366310 33366625 -38787257 - AluSx SINE Alu -1 311 1 2141 126 13 7 chr20 33366634 33366935 -38786947 - AluSx SINE Alu -9 303 1 2029 237 115 62 chr20 33366935 33367596 -38786286 - L1MC4a LINE L1 -845 6963 6233 1397 160 153 8 chr20 33367692 33367954 -38785928 - AluJo SINE Alu 0 302 3 253 299 26 0 chr20 33367959 33368036 -38785846 + L1MC4a LINE L1 5542 5620 -2188 1242 229 61 57 chr20 33368050 33368575 -38785307 + L1MC4a LINE L1 5691 6217 -1591 899 232 171 70 chr20 33368653 33368701 -38785181 - HAL1 LINE L1 -608 1899 1857 645 205 9 0 chr20 33368701 33368813 -38785069 + MER81 DNA DNA 1 113 -1 899 232 171 70 chr20 33368813 33369418 -38784464 - HAL1 LINE L1 -650 1857 1180 22 0 0 0 chr20 33369502 33369524 -38784358 + AT_rich Low_complexity Low_complexity 1 22 0 647 205 0 33 chr20 33369532 33369654 -38784228 + FLAM_A SINE Alu 8 125 -17 809 292 96 84 chr20 33369676 33370069 -38783813 - HAL1 LINE L1 -1520 987 600 2148 107 0 7 chr20 33370069 33370406 -38783476 - AluSq SINE Alu 0 313 1 809 292 96 84 chr20 33370406 33370980 -38782902 - HAL1 LINE L1 -1907 600 8 432 222 8 34 chr20 33371042 33371159 -38782723 + L1ME2 LINE L1 4479 4592 -1554 404 125 0 0 chr20 33371177 33371241 -38782641 - L1MA4 LINE L1 -11 6289 6226 863 159 0 0 chr20 33371252 33371409 -38782473 - L1MA4 LINE L1 -129 6171 6015 230 240 70 10 chr20 33371618 33371718 -38782164 - L1M4 LINE L1 -348 5830 5725 864 190 118 97 chr20 33372052 33372383 -38781499 + MER46C DNA MER2_type 1 338 0 23 0 0 0 chr20 33372818 33372841 -38781041 + AT_rich Low_complexity Low_complexity 1 23 0 1629 167 10 42 chr20 33372861 33372994 -38780888 + AluJb SINE Alu 1 137 -175 2173 104 0 3 chr20 33372994 33373282 -38780600 + AluSg SINE Alu 1 287 -23 239 0 0 31 chr20 33373289 33373321 -38780561 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 1629 167 10 42 chr20 33373321 33373490 -38780392 + AluJb SINE Alu 143 301 -11 1014 182 50 5 chr20 33373537 33373735 -38780147 - L1MB7 LINE L1 -15 6169 5963 443 227 100 105 chr20 33373767 33373918 -38779964 - L1M4 LINE L1 -1430 4716 4566 2337 116 0 0 chr20 33373918 33374228 -38779654 - AluSg SINE Alu 0 310 1 443 227 100 105 chr20 33374228 33374297 -38779585 - L1M4 LINE L1 -1580 4566 4498 1942 152 3 3 chr20 33374297 33374600 -38779282 - AluJo SINE Alu -9 303 1 443 227 100 105 chr20 33374600 33374739 -38779143 - L1M4 LINE L1 -1648 4498 4358 2219 106 7 0 chr20 33374776 33375077 -38778805 - AluSq SINE Alu -10 303 1 2499 172 113 81 chr20 33375855 33375946 -38777936 + L1ME2 LINE L1 5270 5357 -807 3049 65 2 12 chr20 33375946 33376348 -38777534 + L1PA8 LINE L1 5775 6172 0 2499 172 113 81 chr20 33376348 33376955 -38776927 + L1ME2 LINE L1 5357 6004 -160 2518 40 0 34 chr20 33376955 33377276 -38776606 - AluY SINE Alu -1 310 1 2499 172 113 81 chr20 33377276 33377443 -38776439 + L1ME2 LINE L1 6004 6164 0 391 238 0 10 chr20 33377476 33377577 -38776305 - L1MC4 LINE L1 -224 7818 7719 2377 89 0 0 chr20 33377678 33377982 -38775900 - AluSg SINE Alu -6 304 1 570 91 53 174 chr20 33378260 33378321 -38775561 + AluJo SINE Alu 21 88 -224 1874 127 16 38 chr20 33378321 33378635 -38775247 - AluSx SINE Alu -4 308 2 1809 157 7 0 chr20 33378639 33378946 -38774936 - AluSx SINE Alu 0 309 1 570 91 53 174 chr20 33378946 33379010 -38774872 + AluJo SINE Alu 91 136 -176 635 292 102 39 chr20 33379255 33379350 -38774532 - L1ME4a LINE L1 0 6121 6033 2189 106 0 3 chr20 33379350 33379651 -38774231 + AluSx SINE Alu 1 300 -12 635 292 102 39 chr20 33379651 33379887 -38773995 - L1ME4a LINE L1 -88 6033 5769 1196 251 77 101 chr20 33379889 33380804 -38773078 - L1ME3A LINE L1 0 6170 5274 2021 118 7 0 chr20 33380823 33381102 -38772780 - AluSx SINE Alu -31 281 1 536 359 104 20 chr20 33381112 33381388 -38772494 - L1ME3A LINE L1 -875 5271 4969 2259 93 3 16 chr20 33381646 33381959 -38771923 - AluSc SINE Alu 0 309 1 310 288 45 128 chr20 33382561 33383030 -38770852 + L2 LINE L2 2843 3272 0 2242 119 3 0 chr20 33383747 33384058 -38769824 - AluSx SINE Alu 0 312 1 219 249 263 3 chr20 33384115 33384227 -38769655 + MIR3 SINE MIR 12 154 -97 184 325 92 33 chr20 33385320 33385440 -38768442 + L2 LINE L2 3145 3271 -1 3087 181 32 18 chr20 33387182 33387735 -38766147 - MER68 LTR ERV1 -1 561 1 303 250 71 57 chr20 33395337 33395477 -38758405 + MIR SINE MIR 35 176 -86 1255 144 79 18 chr20 33396241 33396470 -38757412 - AluJo SINE Alu -17 295 53 393 266 88 6 chr20 33397246 33397416 -38756466 + L1MC4 LINE L1 1943 6983 -1339 371 397 42 35 chr20 33397310 33397622 -38756260 - L1MC4 LINE L1 -1339 6703 6390 * 234 0 0 0 chr20 33402501 33402527 -38751355 + (A)n Simple_repeat Simple_repeat 1 26 0 222 204 0 0 chr20 33402830 33402884 -38750998 + (TGG)n Simple_repeat Simple_repeat 1 54 0 323 246 152 11 chr20 33403913 33404022 -38749860 + MIR SINE MIR 29 151 -57 214 307 144 25 chr20 33406343 33406545 -38747337 + L2 LINE L2 2643 2868 -446 276 317 49 0 chr20 33408227 33408309 -38745573 + MIR SINE MIR 98 183 -79 221 231 0 19 chr20 33408722 33408774 -38745108 + (TCG)n Simple_repeat Simple_repeat 1 51 0 311 287 62 54 chr20 33408981 33409110 -38744772 + MIR SINE MIR 78 207 -55 181 320 0 0 chr20 33409823 33409873 -38744009 - L2 LINE L2 -87 3185 3136 182 268 62 62 chr20 33410098 33410195 -38743687 + MIR SINE MIR 28 124 -84 196 239 104 15 chr20 33410506 33410573 -38743309 - MIR3 SINE MIR -47 161 89 204 40 0 0 chr20 33412333 33412358 -38741524 + (CCCCAG)n Simple_repeat Simple_repeat 2 26 0 185 284 193 11 chr20 33412991 33413079 -38740803 - L2 LINE L2 -7 3306 3203 185 250 39 0 chr20 33413757 33413809 -38740073 + MIR SINE MIR 95 148 -60 233 330 57 0 chr20 33414240 33414328 -38739554 - Charlie8 DNA MER1_type -2244 173 81 1275 156 111 59 chr20 33414339 33414478 -38739404 - AluJo SINE Alu -8 304 174 2289 95 0 3 chr20 33414478 33414782 -38739100 - AluSq SINE Alu -10 303 1 1275 156 111 59 chr20 33414782 33414931 -38738951 - AluJo SINE Alu -138 174 1 980 237 95 0 chr20 33414954 33415306 -38738576 + L1MB4 LINE L1 5752 6161 -10 201 341 11 0 chr20 33415999 33416087 -38737795 + L2 LINE L2 2976 3064 -208 331 299 75 0 chr20 33416363 33416510 -38737372 + L2 LINE L2 2933 3090 -223 2441 81 0 0 chr20 33416510 33416819 -38737063 - AluY SINE Alu -2 309 1 238 291 156 22 chr20 33417043 33417222 -38736660 + MLT1K LTR MaLR 112 314 -274 2367 80 0 0 chr20 33417722 33418021 -38735861 + AluSc SINE Alu 1 299 -10 984 229 62 14 chr20 33419783 33420071 -38733811 - MER33 DNA MER1_type 0 324 23 2019 115 49 0 chr20 33421075 33421363 -38732519 - AluSx SINE Alu -8 304 3 2352 93 0 6 chr20 33423716 33424028 -38729854 + AluSg SINE Alu 1 310 0 213 326 35 0 chr20 33424103 33424189 -38729693 + MIR SINE MIR 84 172 -90 2285 100 3 3 chr20 33424459 33424768 -38729114 - AluSp SINE Alu -4 309 1 326 224 0 0 chr20 33425486 33425553 -38728329 - L2 LINE L2 0 3272 3206 2720 122 44 2 chr20 33426718 33427127 -38726755 + MSTB LTR MaLR 1 426 0 342 0 0 0 chr20 33431296 33431334 -38722548 + (CA)n Simple_repeat Simple_repeat 2 39 0 560 302 166 29 chr20 33431715 33432125 -38721757 - L2 LINE L2 0 3313 2848 545 258 8 0 chr20 33432314 33432442 -38721440 - MIR SINE MIR -73 189 61 196 299 60 0 chr20 33433141 33433208 -38720674 - MIR SINE MIR -165 97 27 288 0 0 0 chr20 33433340 33433372 -38720510 + (CA)n Simple_repeat Simple_repeat 2 33 0 259 122 24 0 chr20 33433422 33433463 -38720419 - L2 LINE L2 -17 3296 3255 1462 165 86 8 chr20 33433712 33433979 -38719903 - AluJb SINE Alu -24 288 1 760 189 0 23 chr20 33434547 33434679 -38719203 + FLAM_C SINE Alu 1 129 -4 21 0 0 0 chr20 33437052 33437073 -38716809 + GC_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr20 33437972 33437994 -38715888 + GC_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr20 33438396 33438420 -38715462 + GC_rich Low_complexity Low_complexity 1 24 0 213 94 0 0 chr20 33438541 33438573 -38715309 + (CTG)n Simple_repeat Simple_repeat 3 34 0 25 31 0 0 chr20 33438657 33438689 -38715193 + GC_rich Low_complexity Low_complexity 1 32 0 191 152 22 0 chr20 33438717 33438763 -38715119 + G-rich Low_complexity Low_complexity 2 48 0 482 295 6 22 chr20 33438790 33438973 -38714909 + G-rich Low_complexity Low_complexity 1 180 0 201 356 0 10 chr20 33439499 33439600 -38714282 + C-rich Low_complexity Low_complexity 2 101 0 33 25 0 0 chr20 33439662 33439702 -38714180 + GC_rich Low_complexity Low_complexity 1 40 0 288 70 0 0 chr20 33440156 33440199 -38713683 + (A)n Simple_repeat Simple_repeat 1 43 0 639 268 29 29 chr20 33441752 33442032 -38711850 + L1MC4 LINE L1 7284 7563 -479 2226 106 3 3 chr20 33442084 33442395 -38711487 + AluSx SINE Alu 1 311 -1 332 297 209 12 chr20 33442433 33442893 -38710989 - L2 LINE L2 -159 3154 2618 297 241 48 12 chr20 33442918 33443001 -38710881 + MIR SINE MIR 52 137 -125 1721 148 0 7 chr20 33443013 33443291 -38710591 - AluSx SINE Alu 0 312 37 566 246 80 0 chr20 33443359 33443521 -38710361 + MLT1F LTR MaLR 1 184 -380 412 321 37 52 chr20 33443591 33443831 -38710051 - L1MC/D LINE L1 -763 5383 5349 1136 66 17 22 chr20 33443831 33444012 -38709870 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 412 321 37 52 chr20 33444012 33444444 -38709438 - L1MC/D LINE L1 -797 5349 4912 967 209 0 0 chr20 33444444 33444616 -38709266 - FRAM SINE Alu -4 172 1 976 130 0 0 chr20 33444761 33444937 -38708945 + AluYa5 SINE Alu 136 311 0 2225 110 0 0 chr20 33444944 33445243 -38708639 + AluSx SINE Alu 1 299 -13 245 146 21 0 chr20 33445243 33445291 -38708591 + (TA)n Simple_repeat Simple_repeat 1 49 0 225 338 110 48 chr20 33445875 33446103 -38707779 + L2 LINE L2 2699 2940 -374 353 375 29 45 chr20 33446127 33446436 -38707446 - L2 LINE L2 -5 3308 3005 1468 246 75 39 chr20 33446855 33446931 -38706951 + L1ME3A LINE L1 5616 5688 -482 1817 174 17 0 chr20 33446931 33447230 -38706652 + AluJo SINE Alu 1 304 -8 1468 246 75 39 chr20 33447230 33447689 -38706193 + L1ME3A LINE L1 5688 6170 0 331 307 81 42 chr20 33447762 33448004 -38705878 - MIR SINE MIR -28 234 43 529 294 29 24 chr20 33448569 33448739 -38705143 + MIR SINE MIR 65 235 -27 322 264 41 58 chr20 33448791 33448912 -38704970 - L2 LINE L2 0 3272 3154 2238 119 7 0 chr20 33449068 33449378 -38704504 + AluSx SINE Alu 1 312 0 242 268 12 24 chr20 33449514 33449596 -38704286 + CT-rich Low_complexity Low_complexity 3 83 0 217 371 51 34 chr20 33450693 33450783 -38703099 - MIR3 SINE MIR -15 193 106 1579 132 33 4 chr20 33450783 33451025 -38702857 + AluJo SINE Alu 5 253 -59 217 371 51 34 chr20 33451025 33451109 -38702773 - MIR3 SINE MIR -102 106 16 804 333 123 0 chr20 33451284 33451635 -38702247 + L2 LINE L2 2919 3312 -1 2194 98 16 10 chr20 33451643 33451948 -38701934 - AluSq SINE Alu -6 307 1 189 0 0 0 chr20 33452154 33452175 -38701707 + (A)n Simple_repeat Simple_repeat 1 21 0 2081 130 3 7 chr20 33453582 33453889 -38699993 + AluJb SINE Alu 5 310 -2 282 157 0 43 chr20 33453909 33453968 -38699914 + AluJb SINE Alu 69 126 -176 2088 111 3 20 chr20 33453968 33454274 -38699608 - AluSg SINE Alu -9 301 1 2161 138 0 0 chr20 33454554 33454865 -38699017 + AluSx SINE Alu 1 311 -1 242 308 71 33 chr20 33454895 33455135 -38698747 + L1M4 LINE L1 4677 4925 -1221 412 239 9 9 chr20 33455200 33455309 -38698573 + L1MC3 LINE L1 6617 6725 -1060 689 174 65 43 chr20 33455309 33455447 -38698435 - FLAM_C SINE Alu -2 141 1 1595 68 0 89 chr20 33455450 33455698 -38698184 - AluY SINE Alu -11 300 75 4387 178 32 50 chr20 33455702 33456787 -38697095 + L1MC3 LINE L1 6720 7785 0 317 275 170 23 chr20 33456791 33456962 -38696920 + L1M4 LINE L1 5023 5218 -928 888 261 31 39 chr20 33456962 33457376 -38696506 + HAL1 LINE L1 2028 2438 -69 2090 104 21 0 chr20 33457408 33457695 -38696187 + AluSx SINE Alu 1 293 -19 2338 87 3 0 chr20 33457726 33458036 -38695846 + AluSq SINE Alu 1 311 -2 359 344 85 54 chr20 33458931 33459372 -38694510 - L1MEc LINE L1 -4082 2228 814 2372 93 0 0 chr20 33459376 33459687 -38694195 + AluY SINE Alu 1 311 0 2023 99 25 0 chr20 33459711 33459995 -38693887 - AluSc SINE Alu -18 291 1 1837 129 54 75 chr20 33460401 33460538 -38693344 + L1MB4 LINE L1 5720 5858 -322 1683 161 40 17 chr20 33460538 33460837 -38693045 + AluJb SINE Alu 1 306 -6 1837 129 54 75 chr20 33460837 33461164 -38692718 + L1MB4 LINE L1 5858 6174 -6 2311 83 3 0 chr20 33461477 33461778 -38692104 + AluSp SINE Alu 1 302 -11 1829 131 3 14 chr20 33462825 33463142 -38690740 + AluSg SINE Alu 1 314 0 494 309 70 66 chr20 33463994 33464359 -38689523 + L2 LINE L2 2856 3225 -88 1961 119 3 3 chr20 33464359 33464645 -38689237 + AluSx SINE Alu 27 312 0 494 309 70 66 chr20 33464645 33464735 -38689147 + L2 LINE L2 3225 3313 0 24 0 0 0 chr20 33466733 33466757 -38687125 + AT_rich Low_complexity Low_complexity 1 24 0 1754 131 0 85 chr20 33466800 33467129 -38686753 + AluJo SINE Alu 1 301 -11 444 230 44 7 chr20 33467172 33467307 -38686575 + Charlie8 DNA MER1_type 126 265 -2152 305 191 67 29 chr20 33467590 33467695 -38686187 - L1ME4a LINE L1 0 6121 6013 528 255 102 59 chr20 33467794 33468116 -38685766 - L1ME4a LINE L1 -237 5884 5549 1445 196 34 19 chr20 33468409 33468678 -38685204 + L1MB4 LINE L1 5853 6129 -51 1555 148 79 7 chr20 33468678 33468969 -38684913 + AluJo SINE Alu 1 312 0 1445 196 34 19 chr20 33468969 33469021 -38684861 + L1MB4 LINE L1 6129 6179 -1 1981 133 7 3 chr20 33469307 33469608 -38684274 + AluSx SINE Alu 1 302 -10 504 291 29 17 chr20 33471665 33471840 -38682042 - MIR SINE MIR -40 222 46 283 212 73 53 chr20 33472979 33473098 -38680784 + MIR SINE MIR 60 180 -82 241 277 134 8 chr20 33473105 33473224 -38680658 - MIR3 SINE MIR -74 134 1 437 233 18 2 chr20 33474100 33474229 -38679653 - MIR SINE MIR -62 146 45 1074 170 0 0 chr20 33474905 33475070 -38678812 - FRAM SINE Alu -1 165 1 2277 74 7 10 chr20 33475101 33475400 -38678482 + AluY SINE Alu 1 298 -13 264 299 72 0 chr20 33476563 33476660 -38677222 - MIR SINE MIR -61 147 44 408 350 49 0 chr20 33479404 33479547 -38674335 - L3 LINE CR1 -54 1523 1374 460 254 73 55 chr20 33480456 33480620 -38673262 + MIR SINE MIR 2 167 -61 1582 161 68 7 chr20 33480692 33480842 -38673040 - AluJo SINE Alu -12 300 161 2092 144 0 6 chr20 33480842 33481155 -38672727 - AluSx SINE Alu -1 311 1 1582 161 68 7 chr20 33481155 33481283 -38672599 - AluJo SINE Alu -151 161 5 429 288 94 12 chr20 33481759 33481929 -38671953 + MIR SINE MIR 31 214 -48 214 269 19 0 chr20 33482408 33482460 -38671422 + MIR SINE MIR 188 240 -22 446 281 23 16 chr20 33484064 33484192 -38669690 + L2 LINE L2 3185 3313 0 405 318 126 9 chr20 33484209 33484423 -38669459 + MIR SINE MIR 22 260 -2 182 321 0 0 chr20 33484944 33484997 -38668885 + MIR SINE MIR 73 125 -137 2471 54 0 0 chr20 33485357 33485651 -38668231 + AluY SINE Alu 1 294 -17 407 197 28 148 chr20 33485666 33485737 -38668145 + L1ME3A LINE L1 6046 6093 -77 2247 105 3 0 chr20 33485737 33486041 -38667841 + AluSp SINE Alu 1 305 -8 407 197 28 148 chr20 33486041 33486111 -38667771 + L1ME3A LINE L1 6093 6170 0 242 188 47 0 chr20 33486138 33486202 -38667680 - L1MB2 LINE L1 -1 6170 6104 218 255 87 137 chr20 33486411 33486465 -38667417 + MIR SINE MIR 66 121 -141 1911 119 63 0 chr20 33486465 33486750 -38667132 - AluSx SINE Alu -9 303 1 218 255 87 137 chr20 33486750 33486856 -38667026 + MIR SINE MIR 121 218 -44 848 168 8 0 chr20 33488102 33488233 -38665649 + FLAM_A SINE Alu 1 132 -1 739 201 123 7 chr20 33488394 33488548 -38665334 + MER5A DNA MER1_type 18 189 0 1724 134 0 88 chr20 33489668 33489997 -38663885 + AluJb SINE Alu 1 300 -12 212 313 9 80 chr20 33491113 33491225 -38662657 + MIR SINE MIR 88 191 -71 23 54 0 0 chr20 33491573 33491610 -38662272 + GC_rich Low_complexity Low_complexity 1 37 0 22 70 0 0 chr20 33491632 33491675 -38662207 + GC_rich Low_complexity Low_complexity 1 43 0 226 262 21 41 chr20 33492022 33492167 -38661715 + (CCCG)n Simple_repeat Simple_repeat 1 142 0 217 321 207 7 chr20 33492225 33492365 -38661517 - MIR SINE MIR -14 248 81 466 260 198 6 chr20 33492508 33492685 -38661197 - MIR SINE MIR -22 240 30 2143 123 0 0 chr20 33492874 33493176 -38660706 - AluSx SINE Alu -10 302 1 204 329 14 14 chr20 33493216 33493289 -38660593 - MIR3 SINE MIR -19 189 117 480 18 0 0 chr20 33493543 33493600 -38660282 + (TCCC)n Simple_repeat Simple_repeat 2 58 0 310 270 14 0 chr20 33494297 33494371 -38659511 + MIR SINE MIR 14 88 -174 203 225 352 14 chr20 33494454 33494596 -38659286 + MIR3 SINE MIR 3 192 -16 226 342 26 8 chr20 33494736 33494853 -38659029 + MIR SINE MIR 31 149 -113 223 232 18 0 chr20 33495649 33495705 -38658177 - L2 LINE L2 0 3313 3257 323 295 78 16 chr20 33495739 33495868 -38658014 + MIR SINE MIR 98 234 -28 235 364 42 17 chr20 33495910 33496028 -38657854 - MIR SINE MIR -34 228 108 360 0 0 0 chr20 33496105 33496145 -38657737 + (CA)n Simple_repeat Simple_repeat 2 41 0 187 261 0 0 chr20 33496318 33496364 -38657518 + L2 LINE L2 3268 3313 0 340 240 144 144 chr20 33497368 33497460 -38656422 + MIR SINE MIR 2 93 -169 1891 152 3 3 chr20 33497460 33497750 -38656132 - AluJb SINE Alu -22 290 1 340 240 144 144 chr20 33497750 33497907 -38655975 + MIR SINE MIR 92 251 -11 489 285 52 0 chr20 33497908 33498080 -38655802 + MIR SINE MIR 43 223 -39 275 280 34 25 chr20 33498237 33498355 -38655527 - L2 LINE L2 -162 3110 2992 1459 122 0 39 chr20 33498377 33498434 -38655448 + AluSg/x SINE Alu 85 143 -169 2195 112 3 0 chr20 33498434 33498737 -38655145 + AluSx SINE Alu 1 304 -8 1459 122 0 39 chr20 33498737 33498909 -38654973 + AluSg/x SINE Alu 143 305 -7 450 314 47 26 chr20 33499170 33499361 -38654521 - L2 LINE L2 -551 2763 2569 275 354 62 42 chr20 33499437 33499725 -38654157 - L2 LINE L2 -397 2917 2624 268 255 69 20 chr20 33499802 33499904 -38653978 - MIR SINE MIR -150 112 6 598 236 88 0 chr20 33499957 33500105 -38653777 - MIR SINE MIR -70 192 32 1113 128 0 39 chr20 33500213 33500393 -38653489 + FRAM SINE Alu 1 165 -11 184 255 21 0 chr20 33500435 33500482 -38653400 + L2 LINE L2 2107 2154 -1160 660 204 136 6 chr20 33500671 33500847 -38653035 + L2 LINE L2 2360 2558 -756 180 373 0 0 chr20 33500888 33500947 -38652935 + MIR3 SINE MIR 100 158 -50 2328 91 3 0 chr20 33501033 33501342 -38652540 - AluSg SINE Alu 0 310 1 1118 123 69 30 chr20 33501342 33501536 -38652346 - AluSp SINE Alu -11 302 98 1993 119 31 0 chr20 33501536 33501829 -38652053 - AluSp SINE Alu -10 303 2 378 244 23 0 chr20 33501959 33502045 -38651837 + L2 LINE L2 3185 3272 0 812 268 38 42 chr20 33502166 33502396 -38651486 - MIR SINE MIR -2 260 30 1816 151 3 3 chr20 33502396 33502687 -38651195 - AluJb SINE Alu -21 291 1 812 268 38 42 chr20 33502687 33502717 -38651165 - MIR SINE MIR -232 30 1 202 280 53 53 chr20 33502942 33503092 -38650790 + L2 LINE L2 2910 3059 -213 425 204 97 1 chr20 33503194 33503310 -38650572 - MIR SINE MIR -65 143 39 789 266 83 34 chr20 33503729 33504079 -38649803 + L1MC4a LINE L1 5529 5895 -1913 * 2738 159 24 14 chr20 33504077 33504567 -38649315 + L1MB8 LINE L1 5011 5515 -663 2071 106 3 0 chr20 33504567 33504872 -38649010 + AluSx SINE Alu 1 306 0 2738 159 24 14 chr20 33504872 33505191 -38648691 + L1MB8 LINE L1 5515 5829 -349 612 148 31 4 chr20 33505191 33505342 -38648540 - MER7A DNA MER2_type 0 336 120 1092 110 86 0 chr20 33505347 33505510 -38648372 - AluSg/x SINE Alu -16 294 118 488 109 0 174 chr20 33505510 33505560 -38648322 - MER7A DNA MER2_type -2925 113 56 1965 139 0 3 chr20 33505560 33505696 -38648186 + AluSx SINE Alu 1 136 -176 2345 87 0 10 chr20 33505696 33506006 -38647876 + AluSg SINE Alu 1 307 -3 1965 139 0 3 chr20 33506006 33506170 -38647712 + AluSx SINE Alu 136 300 -12 488 109 0 174 chr20 33506170 33506190 -38647692 - MER7A DNA MER2_type -2982 56 34 2074 123 0 0 chr20 33506190 33506475 -38647407 + AluSx SINE Alu 1 285 -27 366 74 0 0 chr20 33506475 33506529 -38647353 + (CAT)n Simple_repeat Simple_repeat 2 55 0 488 109 0 174 chr20 33506529 33506594 -38647288 - MER7A DNA MER2_type -3002 36 2 1692 132 38 74 chr20 33506594 33506885 -38646997 + L1MB8 LINE L1 5827 6104 -74 1861 167 3 3 chr20 33506885 33507185 -38646697 - AluJo SINE Alu -12 300 1 1692 132 38 74 chr20 33507185 33507258 -38646624 + L1MB8 LINE L1 6104 6178 0 24 0 0 0 chr20 33507469 33507493 -38646389 + AT_rich Low_complexity Low_complexity 1 24 0 2136 103 0 0 chr20 33507501 33507806 -38646076 + AluSq SINE Alu 1 305 0 1768 118 8 4 chr20 33507817 33508072 -38645810 + AluSx SINE Alu 1 256 -56 571 194 70 60 chr20 33508194 33508395 -38645487 + L2 LINE L2 2480 2682 -632 891 268 140 17 chr20 33508396 33508818 -38645064 + L2 LINE L2 2831 3304 -9 945 211 104 11 chr20 33508835 33509114 -38644768 + L1MD3 LINE L1 7689 7993 -2 2544 49 0 3 chr20 33509135 33509443 -38644439 + AluY SINE Alu 1 307 -4 276 344 51 32 chr20 33509922 33510079 -38643803 - MIR SINE MIR -4 258 99 708 330 62 71 chr20 33510106 33510315 -38643567 + L2 LINE L2 2823 3032 -240 1982 157 54 57 chr20 33510315 33510409 -38643473 + MLT1B LTR MaLR 1 94 -296 1360 194 56 18 chr20 33510409 33510693 -38643189 - AluJo SINE Alu -17 295 1 1982 157 54 57 chr20 33510693 33510986 -38642896 + MLT1B LTR MaLR 94 387 -3 708 330 62 71 chr20 33510986 33511228 -38642654 + L2 LINE L2 3032 3270 -2 199 348 61 17 chr20 33511374 33511489 -38642393 + L3 LINE CR1 586 705 -872 188 313 31 52 chr20 33511643 33511739 -38642143 - MIR SINE MIR -135 127 34 217 333 0 0 chr20 33511878 33511941 -38641941 - MIR SINE MIR -91 117 55 222 301 165 10 chr20 33512066 33512169 -38641713 + MIR SINE MIR 33 151 -57 1811 129 48 4 chr20 33512879 33513151 -38640731 + AluJb SINE Alu 1 284 -28 228 348 0 36 chr20 33513560 33513672 -38640210 - MIR3 SINE MIR -27 181 74 423 324 24 12 chr20 33513786 33513956 -38639926 - L2 LINE L2 -471 2843 2672 223 276 105 0 chr20 33514080 33514156 -38639726 + L3 LINE CR1 1419 1502 -75 337 247 282 11 chr20 33514190 33514364 -38639518 + L2 LINE L2 3027 3247 -25 321 250 26 0 chr20 33514418 33514494 -38639388 + L2 LINE L2 3187 3264 -8 481 280 15 0 chr20 33514634 33514766 -38639116 - MIR SINE MIR -96 166 33 355 270 21 5 chr20 33515431 33515557 -38638325 - MIR SINE MIR -58 150 34 997 238 44 4 chr20 33515619 33515867 -38638015 - MIR SINE MIR -3 259 2 512 266 178 6 chr20 33516766 33516935 -38636947 + MIR SINE MIR 20 217 -45 1084 127 0 0 chr20 33516935 33517112 -38636770 + AluJb SINE Alu 133 309 0 355 277 169 54 chr20 33517467 33517651 -38636231 + L1M4 LINE L1 3072 3276 -2870 272 173 8 45 chr20 33517699 33517832 -38636050 + GA-rich Low_complexity Low_complexity 2 129 0 202 267 0 0 chr20 33517836 33517881 -38636001 - L2 LINE L2 -17 3255 3211 352 294 0 10 chr20 33518174 33518276 -38635606 - MIR SINE MIR -57 151 51 596 273 74 9 chr20 33518792 33519008 -38634874 - MIR SINE MIR -31 231 2 228 290 16 0 chr20 33519008 33519039 -38634843 - MIR3 SINE MIR -43 165 134 428 232 65 36 chr20 33519039 33519177 -38634705 + MIR3 SINE MIR 4 145 -63 345 270 56 87 chr20 33520021 33520217 -38633665 + MIR SINE MIR 31 220 -42 1379 126 106 78 chr20 33520267 33520560 -38633322 + AluJo SINE Alu 6 306 -6 520 306 36 73 chr20 33520560 33520779 -38633103 - MIR SINE MIR -12 250 40 1240 258 83 48 chr20 33521038 33521457 -38632425 + L2 LINE L2 2880 3313 0 221 327 79 10 chr20 33521447 33521548 -38632334 - MIR SINE MIR -71 137 30 * 183 296 144 38 chr20 33521916 33522048 -38631834 - MIR SINE MIR -109 153 8 291 333 31 13 chr20 33522098 33522292 -38631590 + MIR SINE MIR 15 256 -6 325 218 11 46 chr20 33522296 33522383 -38631499 + (CACCAT)n Simple_repeat Simple_repeat 4 87 0 935 152 6 0 chr20 33522383 33522561 -38631321 + (CAT)n Simple_repeat Simple_repeat 1 179 0 438 208 19 19 chr20 33522526 33522685 -38631197 + (CACCAT)n Simple_repeat Simple_repeat 4 162 0 * 198 315 9 12 chr20 33523406 33523488 -38630394 - MIR SINE MIR -52 156 72 587 301 184 10 chr20 33523493 33524002 -38629880 - L2 LINE L2 -54 3259 2560 400 272 30 6 chr20 33524225 33524394 -38629488 + L2 LINE L2 3150 3313 0 679 242 101 0 chr20 33524494 33524672 -38629210 - MIR SINE MIR -20 242 47 508 300 12 19 chr20 33525382 33525542 -38628340 - MIR SINE MIR -75 187 29 2046 99 0 74 chr20 33525645 33525992 -38627890 - AluSx SINE Alu 0 312 1 465 306 64 17 chr20 33526659 33526832 -38627050 + MIR SINE MIR 66 246 -16 376 272 194 27 chr20 33526858 33527044 -38626838 - MIR SINE MIR -25 237 30 617 228 15 66 chr20 33527447 33527520 -38626362 - MIR SINE MIR -48 214 139 1587 142 92 21 chr20 33527520 33527802 -38626080 - AluJb SINE Alu -10 302 1 617 228 15 66 chr20 33527802 33527925 -38625957 - MIR SINE MIR -123 139 28 608 142 79 16 chr20 33528095 33528222 -38625660 - MIR SINE MIR -107 155 21 360 301 73 7 chr20 33528512 33528648 -38625234 - MIR SINE MIR -71 191 47 401 302 9 9 chr20 33528766 33528882 -38625000 - MIR SINE MIR -49 213 98 219 227 106 0 chr20 33528898 33528964 -38624918 + MIR SINE MIR 113 185 -77 183 374 28 68 chr20 33529880 33530129 -38623753 + L2 LINE L2 2949 3187 -85 * 1556 271 53 23 chr20 33530115 33530951 -38622931 - L2 LINE L2 -43 3270 2413 219 272 196 0 chr20 33530990 33531082 -38622800 + MIR SINE MIR 28 137 -125 184 260 94 42 chr20 33531482 33531578 -38622304 + MIR SINE MIR 35 135 -73 782 165 8 8 chr20 33532048 33532181 -38621701 + FLAM_A SINE Alu 1 133 0 364 349 89 7 chr20 33532268 33532414 -38621468 - MIR SINE MIR -6 256 99 296 308 83 0 chr20 33532409 33532552 -38621330 - MIR SINE MIR -1 261 104 * 537 144 0 0 chr20 33532580 33532670 -38621212 + (GGAA)n Simple_repeat Simple_repeat 3 92 0 231 256 70 35 chr20 33532674 33532760 -38621122 - MIR SINE MIR -170 92 4 1281 146 19 9 chr20 33532871 33533083 -38620799 - AluJo SINE Alu -15 297 84 342 300 14 64 chr20 33533194 33533334 -38620548 - MIR3 SINE MIR -63 145 13 270 275 9 18 chr20 33533726 33533835 -38620047 + (CA)n Simple_repeat Simple_repeat 1 108 0 494 281 33 7 chr20 33534630 33534783 -38619099 + MIR SINE MIR 83 239 -23 311 284 39 29 chr20 33535210 33535312 -38618570 + MIR3 SINE MIR 103 205 -3 180 0 0 0 chr20 33536368 33536388 -38617494 + (TG)n Simple_repeat Simple_repeat 2 21 0 22 35 0 0 chr20 33537778 33537807 -38616075 + GC_rich Low_complexity Low_complexity 1 29 0 210 255 10 41 chr20 33537877 33537975 -38615907 + G-rich Low_complexity Low_complexity 4 98 0 23 54 0 0 chr20 33538016 33538053 -38615829 + GC_rich Low_complexity Low_complexity 1 37 0 21 36 0 0 chr20 33538100 33538128 -38615754 + GC_rich Low_complexity Low_complexity 1 28 0 23 68 0 0 chr20 33538199 33538243 -38615639 + GC_rich Low_complexity Low_complexity 1 44 0 296 266 16 0 chr20 33538496 33538560 -38615322 - MIR SINE MIR -62 146 82 335 287 56 0 chr20 33538676 33538784 -38615098 + L2 LINE L2 3143 3256 -16 185 297 232 0 chr20 33539474 33539602 -38614280 + MIR SINE MIR 79 240 -22 804 320 147 4 chr20 33539670 33540176 -38613706 - L2 LINE L2 -1 3312 2725 1599 141 54 22 chr20 33540615 33540892 -38612990 - AluJb SINE Alu -26 286 1 619 77 0 0 chr20 33541014 33541092 -38612790 - AluJo SINE Alu -234 78 1 296 307 52 33 chr20 33541231 33541384 -38612498 - MIR3 SINE MIR -30 178 23 208 236 55 0 chr20 33541677 33541732 -38612150 + L2 LINE L2 3028 3085 -187 216 0 0 0 chr20 33541880 33541904 -38611978 + (TGAA)n Simple_repeat Simple_repeat 3 26 0 341 252 19 37 chr20 33542039 33542146 -38611736 + MIR SINE MIR 98 202 -60 327 286 107 9 chr20 33542170 33542282 -38611600 - L2 LINE L2 0 3272 3150 1922 133 7 10 chr20 33542305 33542605 -38611277 + AluJo SINE Alu 1 299 -13 2001 125 3 14 chr20 33542649 33542945 -38610937 + AluSx SINE Alu 1 293 -19 861 274 60 18 chr20 33543249 33543530 -38610352 + L2 LINE L2 3021 3313 0 225 0 0 0 chr20 33543544 33543569 -38610313 + (GA)n Simple_repeat Simple_repeat 1 25 0 * 432 0 0 0 chr20 33543568 33543616 -38610266 + (TG)n Simple_repeat Simple_repeat 2 49 0 508 281 68 7 chr20 33543702 33543848 -38610034 + MIR SINE MIR 90 244 -18 233 343 38 19 chr20 33544310 33544415 -38609467 - MIR SINE MIR -145 117 11 189 0 0 0 chr20 33544451 33544472 -38609410 + (A)n Simple_repeat Simple_repeat 1 21 0 2070 103 69 0 chr20 33544474 33544764 -38609118 + AluSx SINE Alu 1 310 -2 1528 142 0 153 chr20 33544782 33545164 -38608718 + AluJo SINE Alu 1 312 0 269 309 63 26 chr20 33545614 33545805 -38608077 + L2 LINE L2 2902 3099 -173 244 331 58 8 chr20 33545865 33545986 -38607896 + MLT1K LTR MaLR 9 135 -453 2342 78 0 0 chr20 33546065 33546358 -38607524 + AluSx SINE Alu 1 293 -19 220 235 20 61 chr20 33546549 33546647 -38607235 + L2 LINE L2 2741 2834 -480 448 124 0 79 chr20 33546708 33546797 -38607085 - Tigger5 DNA MER2_type 0 2323 2242 2105 137 0 0 chr20 33546823 33547129 -38606753 - AluJb SINE Alu -5 307 2 281 226 12 71 chr20 33547131 33547215 -38606667 + Tigger5 DNA MER2_type 2242 2320 -3 * 431 175 0 12 chr20 33547215 33547294 -38606588 - Tigger5 DNA MER2_type -2245 78 1 310 310 30 103 chr20 33547295 33547595 -38606287 + L2 LINE L2 2940 3217 -55 255 119 0 0 chr20 33547726 33547768 -38606114 + MER103 DNA DNA 55 96 -70 434 241 127 32 chr20 33547798 33547956 -38605926 - MIR3 SINE MIR -15 193 21 983 243 4 61 chr20 33547982 33548185 -38605697 + MIR SINE MIR 17 205 -57 2133 103 14 0 chr20 33548185 33548477 -38605405 + AluSx SINE Alu 1 296 -16 983 243 4 61 chr20 33548477 33548520 -38605362 + MIR SINE MIR 205 249 -13 243 240 205 63 chr20 33549295 33549422 -38604460 + MIR SINE MIR 10 153 -62 443 250 30 30 chr20 33549682 33549814 -38604068 + MIR3 SINE MIR 23 154 -54 597 307 57 59 chr20 33549870 33550010 -38603872 + L2 LINE L2 2831 2970 -302 2058 110 3 10 chr20 33550010 33550302 -38603580 - AluSx SINE Alu -22 290 1 597 307 57 59 chr20 33550302 33550601 -38603281 + L2 LINE L2 2970 3269 -3 191 333 60 12 chr20 33551030 33551114 -38602768 - MIR SINE MIR -116 146 59 2449 74 0 0 chr20 33551159 33551470 -38602412 + AluY SINE Alu 1 311 0 1522 162 42 11 chr20 33551484 33551749 -38602133 - AluJo SINE Alu -39 273 1 630 179 0 11 chr20 33551921 33552054 -38601828 + MIR SINE MIR 34 164 -44 302 279 67 78 chr20 33552287 33552331 -38601551 - MIR SINE MIR -68 194 151 2147 118 10 0 chr20 33552331 33552636 -38601246 + AluSx SINE Alu 1 308 -4 302 279 67 78 chr20 33552636 33552770 -38601112 - MIR SINE MIR -111 151 18 427 196 65 9 chr20 33552984 33553091 -38600791 + L2 LINE L2 3160 3272 0 211 243 14 27 chr20 33553132 33553206 -38600676 - MIR SINE MIR -65 143 81 2058 137 0 0 chr20 33553217 33553517 -38600365 - AluSq SINE Alu -13 300 1 246 310 95 35 chr20 33553741 33553857 -38600025 - MIR3 SINE MIR -37 171 49 * 331 337 69 29 chr20 33553830 33554106 -38599776 - L2 LINE L2 -404 2910 2624 1091 242 149 30 chr20 33554107 33554896 -38598986 + L2 LINE L2 2438 3310 -3 380 309 49 10 chr20 33554875 33555049 -38598833 - MIR SINE MIR -59 203 24 * 433 311 25 0 chr20 33555466 33555588 -38598294 + MIR SINE MIR 47 171 -91 259 299 84 79 chr20 33555667 33555745 -38598137 + L2 LINE L2 3030 3106 -166 1844 162 0 23 chr20 33555745 33556054 -38597828 - AluJb SINE Alu 0 312 11 259 299 84 79 chr20 33556054 33556189 -38597693 + L2 LINE L2 3106 3244 -28 211 254 28 42 chr20 33556323 33556394 -38597488 + MIR SINE MIR 93 162 -100 419 246 25 25 chr20 33556682 33556804 -38597078 - MIR3 SINE MIR -82 126 5 193 368 0 0 chr20 33557241 33557309 -38596573 - MIR SINE MIR -81 181 114 472 312 0 0 chr20 33557547 33557672 -38596210 + MIR SINE MIR 67 191 -71 950 295 153 33 chr20 33557719 33558440 -38595442 + L2 LINE L2 1666 2472 -842 351 364 66 63 chr20 33558456 33558882 -38595000 - HAL1 LINE L1 -1203 1304 878 619 109 43 57 chr20 33558882 33559233 -38594649 + (TCTCTG)n Simple_repeat Simple_repeat 1 346 0 544 323 111 13 chr20 33559244 33559924 -38593958 + L2 LINE L2 2471 3272 -41 257 331 33 46 chr20 33560044 33560349 -38593533 + L2 LINE L2 2569 2869 -445 204 265 92 41 chr20 33560507 33560605 -38593277 - L2 LINE L2 -33 3239 3137 409 273 298 11 chr20 33560607 33560889 -38592993 + L2 LINE L2 2951 3313 0 * 523 259 214 14 chr20 33560860 33561149 -38592733 - L2 LINE L2 -123 3190 2844 334 277 51 29 chr20 33561183 33561320 -38592562 - MIR3 SINE MIR -67 141 2 846 295 85 36 chr20 33561622 33562093 -38591789 + L2 LINE L2 2814 3307 -6 465 282 1 43 chr20 33562103 33562257 -38591625 - MIR3 SINE MIR -53 155 5 319 338 78 20 chr20 33563642 33563846 -38590036 - MIR SINE MIR -34 228 13 186 283 94 0 chr20 33563946 33563999 -38589883 - L2 LINE L2 -3 3269 3212 342 322 0 8 chr20 33564151 33564269 -38589613 - MIR SINE MIR -58 150 34 254 398 66 22 chr20 33564937 33565118 -38588764 + MIR3 SINE MIR 19 207 -1 1143 140 0 24 chr20 33565230 33565726 -38588156 + (TGGA)n Simple_repeat Simple_repeat 3 311 0 464 235 0 7 chr20 33565748 33565901 -38587981 + (TGGA)n Simple_repeat Simple_repeat 1 152 0 855 169 0 0 chr20 33565914 33566086 -38587796 + (TGGA)n Simple_repeat Simple_repeat 3 174 0 219 224 0 0 chr20 33566089 33566138 -38587744 + (GCTG)n Simple_repeat Simple_repeat 1 49 0 696 206 0 0 chr20 33566172 33566448 -38587434 + (TGGA)n Simple_repeat Simple_repeat 1 276 0 473 324 120 45 chr20 33566541 33567261 -38586621 + L2 LINE L2 2461 3260 -12 1426 133 0 129 chr20 33567300 33567528 -38586354 - AluJo SINE Alu -54 258 73 2179 120 0 3 chr20 33567528 33567828 -38586054 + AluSx SINE Alu 1 299 -13 1426 133 0 129 chr20 33567828 33567885 -38585997 - AluJo SINE Alu -239 73 10 239 284 15 0 chr20 33567892 33567959 -38585923 + (TGGA)n Simple_repeat Simple_repeat 1 68 0 1797 174 3 0 chr20 33568072 33568376 -38585506 + AluJo SINE Alu 1 305 -7 206 293 28 57 chr20 33568612 33568718 -38585164 + L2 LINE L2 3171 3273 -40 529 279 57 13 chr20 33568751 33568909 -38584973 + L2 LINE L2 2644 2808 -506 891 157 63 0 chr20 33568911 33569102 -38584780 - MER20 DNA MER1_type 0 219 17 422 232 89 36 chr20 33569127 33569295 -38584587 + L2 LINE L2 3041 3217 -96 240 388 0 31 chr20 33569436 33569451 -38584431 - MIR3 SINE MIR -73 135 121 2136 106 0 0 chr20 33569451 33569759 -38584123 + AluSx SINE Alu 1 308 0 240 388 0 31 chr20 33569759 33569871 -38584011 - MIR3 SINE MIR -87 121 11 1813 157 0 28 chr20 33570219 33570538 -38583344 + AluJo SINE Alu 1 310 -2 248 252 58 58 chr20 33570924 33571027 -38582855 - MIR SINE MIR -74 134 32 286 226 0 16 chr20 33571037 33571099 -38582783 + MIR SINE MIR 86 146 -116 995 261 87 27 chr20 33571118 33571142 -38582740 - L2 LINE L2 -12 3301 3280 2261 84 3 3 chr20 33571142 33571441 -38582441 - AluSx SINE Alu -13 299 1 995 261 87 27 chr20 33571441 33571974 -38581908 - L2 LINE L2 -33 3280 2701 1483 219 3 16 chr20 33572019 33572158 -38581724 + AluJo SINE Alu 2 141 -171 2084 102 0 38 chr20 33572158 33572471 -38581411 + AluSx SINE Alu 1 301 -11 1483 219 3 16 chr20 33572471 33572641 -38581241 + AluJo SINE Alu 141 307 -5 307 390 21 7 chr20 33572653 33572794 -38581088 + L1MC4a LINE L1 5854 5996 -1812 229 240 83 0 chr20 33572824 33572920 -38580962 + L1MC4a LINE L1 6070 6173 -1635 208 154 0 26 chr20 33572934 33572973 -38580909 + A-rich Low_complexity Low_complexity 4 41 0 192 165 17 70 chr20 33573051 33573166 -38580716 + G-rich Low_complexity Low_complexity 5 113 0 264 246 0 70 chr20 33573170 33573312 -38580570 + (GGGTG)n Simple_repeat Simple_repeat 4 135 0 268 345 0 33 chr20 33573312 33573475 -38580407 - MIR SINE MIR -65 143 10 212 290 58 0 chr20 33573514 33573583 -38580299 + L2 LINE L2 3200 3272 0 948 237 173 36 chr20 33573597 33573871 -38580011 - L2 LINE L2 0 3313 3078 1577 151 44 7 chr20 33573871 33574143 -38579739 + AluJo SINE Alu 21 302 -10 948 237 173 36 chr20 33574143 33574399 -38579483 - L2 LINE L2 -235 3078 2694 294 301 72 12 chr20 33575122 33575238 -38578644 - MIR SINE MIR -45 163 47 913 114 0 29 chr20 33575238 33575378 -38578504 + AluJb SINE Alu 169 304 -8 386 248 101 8 chr20 33575385 33575514 -38578368 - L2 LINE L2 -315 2998 2858 927 142 12 12 chr20 33576248 33576410 -38577472 - AluSg/x SINE Alu -16 294 133 353 324 122 12 chr20 33576650 33576897 -38576985 + L2 LINE L2 2596 2869 -445 438 268 105 53 chr20 33576906 33577096 -38576786 + MIR SINE MIR 63 262 0 255 321 200 23 chr20 33577148 33577363 -38576519 + L2 LINE L2 2930 3182 -90 207 139 0 0 chr20 33577482 33577518 -38576364 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 1701 148 8 0 chr20 33577611 33577867 -38576015 + AluJb SINE Alu 33 290 -22 181 339 0 0 chr20 33578262 33578321 -38575561 - MIR3 SINE MIR -15 193 135 303 283 67 0 chr20 33578367 33578492 -38575390 - MIR SINE MIR -21 241 109 316 258 21 21 chr20 33578590 33578687 -38575195 + MIR SINE MIR 70 166 -96 1820 112 33 4 chr20 33580370 33580646 -38573236 + AluSx SINE Alu 1 284 -28 495 0 0 0 chr20 33580646 33580701 -38573181 + (CA)n Simple_repeat Simple_repeat 2 56 0 225 172 0 86 chr20 33581251 33581309 -38572573 - MIR SINE MIR -65 143 91 257 127 16 111 chr20 33581581 33581644 -38572238 - MIR3 SINE MIR -36 172 116 214 307 11 34 chr20 33582135 33582223 -38571659 - MIR SINE MIR -79 183 98 302 283 62 21 chr20 33582536 33582681 -38571201 + L1MC4a LINE L1 5731 5881 -1927 1870 142 3 28 chr20 33582690 33583007 -38570875 + AluJb SINE Alu 1 309 -3 231 114 0 0 chr20 33583007 33583042 -38570840 + (GGGA)n Simple_repeat Simple_repeat 1 35 0 2258 110 0 0 chr20 33583056 33583366 -38570516 + AluSx SINE Alu 3 312 0 274 267 57 29 chr20 33584577 33584682 -38569200 - L1MC4a LINE L1 -1915 5893 5786 213 340 106 0 chr20 33584727 33584821 -38569061 - MIR SINE MIR -41 221 118 2183 111 68 14 chr20 33584828 33585181 -38568701 - THE1C LTR MaLR -3 372 1 277 173 358 0 chr20 33585181 33585262 -38568620 + MER81 DNA DNA 5 114 0 314 192 313 0 chr20 33585614 33585713 -38568169 - MIR SINE MIR -108 154 25 183 312 150 40 chr20 33586219 33586392 -38567490 - L2 LINE L2 -183 3089 2898 252 270 27 27 chr20 33586810 33586921 -38566961 + L1ME4a LINE L1 5941 6051 -70 1913 144 20 0 chr20 33586933 33587231 -38566651 + AluSx SINE Alu 1 304 -8 2053 128 10 3 chr20 33587233 33587539 -38566343 + AluSg SINE Alu 1 308 -2 1325 122 25 0 chr20 33587549 33587746 -38566136 + AluJb SINE Alu 1 202 -110 619 182 27 0 chr20 33588828 33588938 -38564944 - MER81 DNA DNA 0 114 2 2010 127 6 19 chr20 33589143 33589459 -38564423 + AluSx SINE Alu 1 312 0 770 262 129 28 chr20 33589488 33589774 -38564108 + L2 LINE L2 2999 3313 0 517 229 6 6 chr20 33589870 33590049 -38563833 + (TG)n Simple_repeat Simple_repeat 2 180 0 615 234 129 0 chr20 33590225 33590396 -38563486 - MIR SINE MIR 0 262 70 283 177 32 0 chr20 33590444 33590506 -38563376 - MIR SINE MIR -63 145 82 224 319 236 5 chr20 33590913 33591104 -38562778 - MIR SINE MIR -16 246 12 394 251 194 26 chr20 33591389 33591513 -38562369 + MIR SINE MIR 21 123 -139 726 146 0 97 chr20 33591513 33591657 -38562225 + FLAM_A SINE Alu 4 133 0 394 251 194 26 chr20 33591657 33591723 -38562159 + MIR SINE MIR 123 243 -19 250 336 21 35 chr20 33591921 33592064 -38561818 - MIR SINE MIR -15 247 107 289 248 28 18 chr20 33592187 33592296 -38561586 + L1ME4a LINE L1 5975 6084 -37 * 3996 164 23 61 chr20 33592289 33592425 -38561457 - L1MB8 LINE L1 0 6178 6038 2040 118 6 16 chr20 33592425 33592738 -38561144 + AluSx SINE Alu 1 310 -2 3996 164 23 61 chr20 33592738 33593052 -38560830 - L1MB8 LINE L1 -140 6038 5714 1715 137 28 59 chr20 33593052 33593373 -38560509 + AluJo SINE Alu 1 311 -1 3996 164 23 61 chr20 33593373 33593841 -38560041 - L1MB8 LINE L1 -464 5714 5294 1961 137 13 22 chr20 33593841 33594156 -38559726 - AluJb SINE Alu 0 312 1 3996 164 23 61 chr20 33594156 33594185 -38559697 - L1MB8 LINE L1 -884 5294 5265 559 209 0 60 chr20 33594798 33594932 -38558950 + MIR SINE MIR 31 156 -106 725 259 21 16 chr20 33595201 33595390 -38558492 + MIR SINE MIR 27 216 -46 441 0 0 0 chr20 33595641 33595690 -38558192 + (CA)n Simple_repeat Simple_repeat 1 49 0 235 267 93 0 chr20 33595691 33595766 -38558116 - MER103 DNA DNA -81 85 4 2012 112 3 10 chr20 33596181 33596507 -38557375 + AluSx SINE Alu 1 312 0 182 243 0 0 chr20 33596820 33596857 -38557025 - L2 LINE L2 -17 3255 3219 237 257 128 46 chr20 33596884 33596993 -38556889 - MIR SINE MIR -109 153 36 209 247 99 12 chr20 33597777 33597858 -38556024 - MIR SINE MIR -145 117 30 283 349 0 72 chr20 33597873 33598025 -38555857 + MIR SINE MIR 2 142 -120 310 278 151 0 chr20 33598032 33598158 -38555724 + MIR SINE MIR 41 185 -77 1921 124 9 64 chr20 33598191 33598521 -38555361 - AluSx SINE Alu 0 312 1 2283 98 0 0 chr20 33599128 33599433 -38554449 + AluSq SINE Alu 1 305 -8 1758 168 0 3 chr20 33599442 33599733 -38554149 + AluJo SINE Alu 6 295 -17 226 244 81 23 chr20 33600096 33600182 -38553700 - MIR3 SINE MIR -107 101 11 257 297 196 0 chr20 33600218 33600437 -38553445 + L2 LINE L2 2885 3146 -167 2258 90 0 37 chr20 33600444 33600767 -38553115 - AluY SINE Alu 0 311 1 670 205 32 53 chr20 33600767 33600957 -38552925 - L1MD3 LINE L1 -6 7989 7804 1305 175 5 0 chr20 33601182 33601405 -38552477 + AluJb SINE Alu 85 308 -4 325 288 129 14 chr20 33601414 33601553 -38552329 - MIR SINE MIR -59 203 49 1359 180 12 50 chr20 33603069 33603392 -38550490 + AluJo SINE Alu 1 311 -1 406 321 6 30 chr20 33603496 33603664 -38550218 + MIR SINE MIR 63 226 -36 207 275 38 12 chr20 33603779 33603859 -38550023 - MIR SINE MIR -131 131 50 220 368 38 8 chr20 33603897 33604030 -38549852 - L2 LINE L2 -17 3296 3160 1899 124 25 45 chr20 33604050 33604364 -38549518 + AluSx SINE Alu 1 308 -4 357 301 113 0 chr20 33605179 33605312 -38548570 - MIR3 SINE MIR -12 196 49 4773 148 58 80 chr20 33605606 33605826 -38548056 + L1MB8 LINE L1 4018 4241 -1937 1871 145 38 0 chr20 33605826 33606116 -38547766 + AluSx SINE Alu 1 301 -11 4773 148 58 80 chr20 33606116 33606576 -38547306 + L1MB8 LINE L1 4241 4710 -1468 1908 165 0 3 chr20 33606576 33606879 -38547003 + AluJb SINE Alu 1 302 -10 4773 148 58 80 chr20 33606879 33607308 -38546574 + L1MB8 LINE L1 4710 5147 -1031 475 121 0 0 chr20 33607308 33607374 -38546508 + AluJ/FLAM SINE Alu 4 69 -243 4773 148 58 80 chr20 33607374 33607527 -38546355 + L1MB8 LINE L1 5147 5302 -876 2126 108 3 10 chr20 33607527 33607833 -38546049 + AluSx SINE Alu 1 304 -8 2464 145 68 2 chr20 33607839 33608238 -38545644 + MSTB LTR MaLR 2 426 0 4773 148 58 80 chr20 33608238 33608595 -38545287 + L1MB8 LINE L1 5307 5679 -499 1908 136 0 7 chr20 33608595 33608889 -38544993 + AluSx SINE Alu 1 292 -20 4773 148 58 80 chr20 33608889 33609080 -38544802 + L1MB8 LINE L1 5679 5873 -305 917 157 0 0 chr20 33609082 33609222 -38544660 + AluJo SINE Alu 1 140 -172 2014 119 0 0 chr20 33609223 33609534 -38544348 + AluSx SINE Alu 1 311 0 416 96 0 55 chr20 33609534 33609607 -38544275 + FLAM_C SINE Alu 73 141 -2 1974 141 0 25 chr20 33609693 33610013 -38543869 + AluSx SINE Alu 1 312 0 1072 79 7 0 chr20 33610071 33610211 -38543671 + AluSq/x SINE Alu 1 141 -172 1583 143 57 14 chr20 33610324 33610604 -38543278 - AluJo SINE Alu -16 296 5 2266 100 0 3 chr20 33610891 33611192 -38542690 - AluSp SINE Alu -13 300 1 395 373 0 6 chr20 33611411 33611572 -38542310 - MIR SINE MIR -15 247 88 266 277 76 3 chr20 33611682 33611803 -38542079 - MIR SINE MIR -61 147 7 203 169 0 51 chr20 33611862 33611921 -38541961 + (TAA)n Simple_repeat Simple_repeat 1 56 0 198 0 0 0 chr20 33611939 33611961 -38541921 + (CAT)n Simple_repeat Simple_repeat 1 22 0 352 286 163 0 chr20 33612510 33612657 -38541225 - MIR SINE MIR -19 243 73 2781 104 3 3 chr20 33612699 33613074 -38540808 - THE1C LTR MaLR 0 375 1 318 265 61 75 chr20 33613214 33613361 -38540521 - L2 LINE L2 -1 3271 3127 216 330 47 28 chr20 33613378 33613484 -38540398 - L2 LINE L2 -18 3295 3188 341 82 41 0 chr20 33614259 33614308 -38539574 + MER66A LTR ERV1 284 334 -144 1961 117 17 10 chr20 33614332 33614632 -38539250 + AluSq SINE Alu 1 302 -11 965 189 6 0 chr20 33614752 33614927 -38538955 + FRAM SINE Alu 1 176 0 2122 108 0 3 chr20 33614968 33615263 -38538619 - AluSg SINE Alu -16 294 1 735 230 120 27 chr20 33615373 33615673 -38538209 + L1ME4a LINE L1 5793 6120 -1 294 291 97 0 chr20 33616520 33616623 -38537259 - L3 LINE CR1 -604 973 861 228 191 0 143 chr20 33617605 33617689 -38536193 - Charlie5 DNA MER1_type 0 2624 2553 1638 114 103 0 chr20 33617699 33617972 -38535910 + AluSg SINE Alu 1 301 -9 1130 122 0 71 chr20 33617996 33618192 -38535690 + AluJb SINE Alu 131 312 0 1957 153 7 0 chr20 33618202 33618497 -38535385 + AluJb SINE Alu 1 297 -15 2240 106 0 0 chr20 33618499 33618801 -38535081 + AluY SINE Alu 3 304 -7 252 0 0 0 chr20 33618813 33618841 -38535041 + (TA)n Simple_repeat Simple_repeat 1 28 0 772 104 96 0 chr20 33618842 33618957 -38534925 - FLAM_C SINE Alu -10 133 8 817 192 127 5 chr20 33618964 33619169 -38534713 - MER33 DNA MER1_type -259 65 1 267 268 226 24 chr20 33619170 33619334 -38534548 - L2 LINE L2 -445 2869 2673 2044 116 3 0 chr20 33619691 33619984 -38533898 - AluY SINE Alu -17 294 1 577 316 58 5 chr20 33620003 33620209 -38533673 + MIR SINE MIR 2 218 -44 254 372 28 0 chr20 33620235 33620360 -38533522 - MIR SINE MIR -75 133 31 2341 91 0 0 chr20 33620363 33620671 -38533211 + AluSx SINE Alu 5 312 0 905 102 38 57 chr20 33620675 33620857 -38533025 + AluSg/x SINE Alu 127 305 0 312 280 61 23 chr20 33621100 33621232 -38532650 + MIR3 SINE MIR 1 137 -71 4159 143 39 61 chr20 33621592 33621935 -38531947 + L1MB1 LINE L1 4905 5254 -914 1962 96 7 33 chr20 33621935 33622236 -38531646 + AluSq SINE Alu 1 293 -20 2304 89 0 6 chr20 33622238 33622551 -38531331 + AluSx SINE Alu 1 311 -1 4159 143 39 61 chr20 33622551 33622567 -38531315 + L1MB1 LINE L1 5255 5270 -898 2073 123 27 0 chr20 33622567 33622868 -38531014 + AluSg SINE Alu 1 309 -1 4159 143 39 61 chr20 33622868 33623576 -38530306 + L1MB1 LINE L1 5270 5958 -210 2323 79 13 0 chr20 33623576 33623880 -38530002 + AluSp SINE Alu 1 308 -5 4159 143 39 61 chr20 33623880 33624051 -38529831 + L1MB1 LINE L1 5958 6131 -37 1835 98 3 78 chr20 33624051 33624380 -38529502 + AluSg SINE Alu 1 306 0 224 57 0 29 chr20 33624400 33624435 -38529447 + (CATA)n Simple_repeat Simple_repeat 3 36 0 1035 177 0 0 chr20 33624438 33624602 -38529280 + FRAM SINE Alu 1 160 -16 226 287 33 74 chr20 33625724 33625846 -38528036 + L2 LINE L2 3155 3271 -1 879 108 0 43 chr20 33626091 33626230 -38527652 - FLAM_C SINE Alu 0 133 1 245 309 32 41 chr20 33626318 33626441 -38527441 + L1ME LINE L1 5541 5662 -459 1731 140 13 42 chr20 33626656 33626963 -38526919 - AluJb SINE Alu -14 298 1 333 0 0 0 chr20 33628140 33628177 -38525705 + (CA)n Simple_repeat Simple_repeat 2 38 0 250 146 0 21 chr20 33628473 33628521 -38525361 - L2 LINE L2 0 3313 3267 250 269 45 0 chr20 33628622 33628689 -38525193 - L2 LINE L2 -218 3054 2985 198 279 49 0 chr20 33628793 33628854 -38525028 - MIR SINE MIR -71 137 74 2376 93 0 7 chr20 33628955 33629257 -38524625 - AluSq SINE Alu -13 300 1 823 86 29 72 chr20 33630244 33630407 -38523475 + FLAM_C SINE Alu 1 157 0 2343 103 0 0 chr20 33630409 33630709 -38523173 + AluSq SINE Alu 1 300 -13 2353 100 0 3 chr20 33630711 33631011 -38522871 + AluSx SINE Alu 1 299 -13 314 275 148 22 chr20 33631202 33631384 -38522498 - MIR SINE MIR -45 217 13 211 333 0 0 chr20 33631878 33631947 -38521935 - MIR SINE MIR -103 105 37 186 282 141 86 chr20 33632115 33632165 -38521717 - MIR3 SINE MIR -7 201 155 1869 134 55 21 chr20 33632165 33632455 -38521427 + AluSg SINE Alu 1 300 -10 186 282 141 86 chr20 33632455 33632567 -38521315 - MIR3 SINE MIR -53 155 30 537 265 65 24 chr20 33632650 33632820 -38521062 + MIR SINE MIR 20 196 -66 226 258 90 11 chr20 33633027 33633116 -38520766 - L2 LINE L2 -260 3053 2958 2496 74 0 7 chr20 33634101 33634410 -38519472 + AluSg SINE Alu 1 307 -3 1136 152 0 0 chr20 33634450 33634615 -38519267 - AluJb SINE Alu -11 301 137 564 276 148 23 chr20 33634696 33634967 -38518915 + L2 LINE L2 2775 3011 -302 2030 125 46 0 chr20 33634967 33635248 -38518634 + AluSg SINE Alu 1 294 -16 564 276 148 23 chr20 33635248 33635261 -38518621 + L2 LINE L2 3011 3021 -292 423 0 0 0 chr20 33635261 33635308 -38518574 + (CA)n Simple_repeat Simple_repeat 2 48 0 564 276 148 23 chr20 33635308 33635497 -38518385 + L2 LINE L2 3021 3311 -2 2267 92 3 26 chr20 33635801 33636104 -38517778 - AluSx SINE Alu -16 296 1 307 236 92 92 chr20 33636292 33636351 -38517531 - MER5B DNA MER1_type -4 174 116 2401 80 0 7 chr20 33636351 33636650 -38517232 + AluSc SINE Alu 5 301 -8 307 236 92 92 chr20 33636650 33636764 -38517118 - MER5B DNA MER1_type -61 117 1 * 338 331 26 32 chr20 33636764 33636913 -38516969 - MER5B DNA MER1_type -18 160 13 1750 149 0 0 chr20 33636921 33637176 -38516706 + AluSx SINE Alu 54 308 -4 2355 75 4 0 chr20 33637232 33637548 -38516334 + AluSx SINE Alu 2 318 0 1098 118 7 13 chr20 33637548 33637753 -38516129 + AluSg/x SINE Alu 129 332 0 507 136 8 59 chr20 33637765 33637863 -38516019 + AluJb SINE Alu 189 290 -22 180 0 0 0 chr20 33637863 33637883 -38515999 + (TAA)n Simple_repeat Simple_repeat 2 21 0 1892 174 3 0 chr20 33637893 33638204 -38515678 + AluJb SINE Alu 1 312 0 1917 173 3 6 chr20 33638217 33638529 -38515353 + AluJb SINE Alu 1 311 -1 281 245 165 42 chr20 33638809 33639021 -38514861 + L1MC5 LINE L1 7546 7783 -178 2690 43 0 0 chr20 33639025 33639325 -38514557 + AluY SINE Alu 1 300 -11 609 190 8 25 chr20 33639341 33639462 -38514420 + FLAM_A SINE Alu 2 120 -13 1671 144 100 0 chr20 33639551 33639822 -38514060 - AluY SINE Alu -13 298 1 1705 193 3 13 chr20 33639844 33640013 -38513869 - AluJo SINE Alu -9 303 137 2353 122 0 0 chr20 33640013 33640317 -38513565 - AluSx SINE Alu -8 304 1 1705 193 3 13 chr20 33640317 33640453 -38513429 - AluJo SINE Alu -175 137 1 1709 143 94 14 chr20 33640523 33640810 -38513072 + AluSg SINE Alu 1 310 0 2515 55 0 0 chr20 33640814 33641104 -38512778 + AluY SINE Alu 1 290 -21 2174 128 3 3 chr20 33641108 33641420 -38512462 + AluSx SINE Alu 1 312 0 363 260 115 0 chr20 33641495 33641599 -38512283 + MER103 DNA DNA 1 116 -50 2315 96 0 6 chr20 33642057 33642369 -38511513 + AluSq SINE Alu 1 310 -3 594 217 17 0 chr20 33642508 33642628 -38511254 + FLAM_A SINE Alu 1 122 -11 403 340 89 15 chr20 33642657 33642860 -38511022 - MIR SINE MIR -37 225 8 2444 92 0 0 chr20 33642906 33643211 -38510671 + AluSq SINE Alu 2 306 -7 1596 147 17 0 chr20 33643220 33643451 -38510431 + AluJo SINE Alu 1 235 -77 652 175 0 17 chr20 33643882 33644002 -38509880 + FLAM_C SINE Alu 1 118 -15 1898 121 0 62 chr20 33644020 33644156 -38509726 + AluSx SINE Alu 1 144 -158 2218 125 0 10 chr20 33644156 33644290 -38509592 + AluSx SINE Alu 2 136 -176 2120 108 0 54 chr20 33644290 33644604 -38509278 + AluSx SINE Alu 1 297 -15 2218 125 0 10 chr20 33644604 33644773 -38509109 + AluSx SINE Alu 136 302 -10 1898 121 0 62 chr20 33644773 33644958 -38508924 + AluSx SINE Alu 144 302 0 2201 103 17 0 chr20 33645136 33645428 -38508454 + AluSx SINE Alu 1 297 -15 2361 64 11 4 chr20 33645433 33645744 -38508138 + AluY SINE Alu 1 313 0 644 52 21 0 chr20 33645773 33645869 -38508013 + (TCTCCC)n Simple_repeat Simple_repeat 1 98 0 6802 59 18 42 chr20 33645869 33647661 -38506221 + SVA Other Other 57 1386 0 228 163 0 23 chr20 33647694 33647737 -38506145 - Alu SINE Alu -198 102 61 438 281 91 23 chr20 33647752 33648059 -38505823 + L1MC4a LINE L1 5689 6017 -104 2564 70 0 0 chr20 33648123 33648424 -38505458 - AluY SINE Alu -10 301 1 1919 151 0 39 chr20 33648477 33648782 -38505100 + AluSx SINE Alu 13 305 -7 2158 102 7 30 chr20 33648805 33649108 -38504774 + AluSg SINE Alu 1 296 -14 2245 128 0 3 chr20 33649118 33649423 -38504459 + AluSq SINE Alu 3 306 -7 1863 150 24 3 chr20 33649647 33649934 -38503948 + AluJo SINE Alu 3 295 -17 2103 118 38 0 chr20 33649963 33650250 -38503632 + AluSc SINE Alu 1 298 -11 406 105 132 0 chr20 33650251 33650327 -38503555 - MER5C DNA MER1_type -171 153 68 333 109 0 0 chr20 33651120 33651175 -38502707 + (CA)n Simple_repeat Simple_repeat 2 56 0 2006 146 19 7 chr20 33651253 33651561 -38502321 - AluJb SINE Alu 0 312 1 815 201 176 80 chr20 33651704 33651855 -38502027 + MLT1A2 LTR MaLR 1 136 -238 2315 117 3 0 chr20 33651855 33652164 -38501718 - AluSx SINE Alu -2 310 1 815 201 176 80 chr20 33652164 33652195 -38501687 + MLT1A2 LTR MaLR 136 163 -211 843 159 0 0 chr20 33652195 33652327 -38501555 + AluJo SINE Alu 1 132 -170 815 201 176 80 chr20 33652327 33652421 -38501461 + MLT1A2 LTR MaLR 163 247 -127 2125 133 0 26 chr20 33652421 33652729 -38501153 + AluSg SINE Alu 1 300 -10 815 201 176 80 chr20 33652729 33652774 -38501108 + MLT1A2 LTR MaLR 247 355 -19 248 133 133 0 chr20 33652781 33652826 -38501056 + MLT1A2 LTR MaLR 315 365 0 2326 98 0 0 chr20 33652969 33653281 -38500601 + AluSx SINE Alu 1 312 0 273 354 139 0 chr20 33653293 33653516 -38500366 + MIR SINE MIR 4 257 -5 965 188 0 0 chr20 33653735 33653748 -38500134 + AluJo SINE Alu 120 132 -180 1831 153 58 10 chr20 33653748 33654043 -38499839 + AluJo SINE Alu 3 311 -1 965 188 0 0 chr20 33654043 33654183 -38499699 + AluJo SINE Alu 131 273 -39 543 299 25 73 chr20 33654563 33654790 -38499092 + L1MC/D LINE L1 5373 5582 -2226 1713 172 0 27 chr20 33654790 33655087 -38498795 - AluJb SINE Alu -23 289 1 543 299 25 73 chr20 33655087 33655173 -38498709 + L1MC/D LINE L1 5582 5671 -2137 624 164 9 17 chr20 33655188 33655304 -38498578 + FLAM_C SINE Alu 8 122 -21 2333 77 0 32 chr20 33655341 33655651 -38498231 + AluY SINE Alu 1 300 -11 2018 103 81 0 chr20 33655651 33655923 -38497959 + AluSx SINE Alu 1 294 -18 2131 107 10 20 chr20 33655995 33656133 -38497749 + AluSx SINE Alu 1 139 -173 2381 87 10 3 chr20 33656133 33656432 -38497450 + AluSx SINE Alu 1 301 -11 2131 107 10 20 chr20 33656432 33656593 -38497289 + AluSx SINE Alu 139 297 -15 2161 99 10 20 chr20 33656593 33656895 -38496987 + AluY SINE Alu 1 299 -12 2386 82 0 0 chr20 33656895 33657187 -38496695 + AluSg1 SINE Alu 7 298 -11 407 222 0 11 chr20 33657252 33657342 -38496540 + AluJo/FLAM SINE Alu 44 132 -180 2104 140 13 0 chr20 33657342 33657649 -38496233 + AluSx SINE Alu 1 311 -1 2035 118 24 3 chr20 33657654 33657941 -38495941 + AluSx SINE Alu 3 295 -17 2123 131 3 0 chr20 33658015 33658313 -38495569 - AluSx SINE Alu -13 299 1 599 162 104 52 chr20 33658358 33658512 -38495370 - FRAM SINE Alu -20 156 1 2187 115 0 3 chr20 33659085 33659403 -38494479 + AluY SINE Alu 1 311 0 1327 173 24 109 chr20 33659457 33659595 -38494287 + AluYb8 SINE Alu 3 151 -167 2287 101 0 7 chr20 33659595 33659891 -38493991 + AluY SINE Alu 1 294 -17 1327 173 24 109 chr20 33659891 33660081 -38493801 + AluYb8 SINE Alu 151 303 -15 851 149 156 19 chr20 33660081 33660235 -38493647 + AluJb SINE Alu 137 311 -1 1745 182 0 29 chr20 33660245 33660552 -38493330 + AluJo SINE Alu 3 300 -12 1731 176 3 26 chr20 33660822 33661003 -38492879 - AluJo SINE Alu -12 300 127 2058 138 14 0 chr20 33661003 33661292 -38492590 + AluSg SINE Alu 1 293 -17 1731 176 3 26 chr20 33661292 33661417 -38492465 - AluJo SINE Alu -185 127 1 1298 179 13 4 chr20 33661427 33661656 -38492226 - AluJo SINE Alu -10 302 72 431 257 181 7 chr20 33661657 33661801 -38492081 + MIR SINE MIR 81 249 -13 279 200 0 0 chr20 33661823 33661878 -38492004 + MIR SINE MIR 100 154 -108 619 205 33 0 chr20 33661882 33662004 -38491878 + AluSq/x SINE Alu 2 127 -186 2398 97 0 0 chr20 33662060 33662370 -38491512 + AluY SINE Alu 1 310 -1 378 159 154 93 chr20 33662390 33662432 -38491450 + MER33 DNA MER1_type 16 54 -2531 1873 156 7 14 chr20 33662432 33662727 -38491155 + AluSx SINE Alu 1 293 -19 2414 88 0 0 chr20 33662732 33663028 -38490854 + AluY SINE Alu 1 296 -15 378 159 154 93 chr20 33663028 33663161 -38490721 + MER33 DNA MER1_type 57 208 -116 464 240 0 10 chr20 33663167 33663263 -38490619 + Tigger3(Golem) DNA MER2_type 18 112 -2917 1311 137 113 14 chr20 33663313 33663525 -38490357 + AluJo SINE Alu 67 299 -13 2247 121 3 0 chr20 33663557 33663862 -38490020 + AluSx SINE Alu 1 306 -6 939 169 0 29 chr20 33663908 33664080 -38489802 - FAM SINE Alu -8 167 1 2165 122 10 3 chr20 33664087 33664381 -38489501 - AluSc SINE Alu -13 296 1 1207 129 83 0 chr20 33664382 33664599 -38489283 + Tigger3(Golem) DNA MER2_type 2740 2974 -55 2321 99 3 0 chr20 33664601 33664894 -38488988 + AluSx SINE Alu 1 294 -18 304 180 56 0 chr20 33664894 33664983 -38488899 + MER33 DNA MER1_type 227 320 -4 26 30 0 0 chr20 33665968 33666001 -38487881 + GC_rich Low_complexity Low_complexity 1 33 0 256 276 38 0 chr20 33666112 33666217 -38487665 + (CCG)n Simple_repeat Simple_repeat 3 111 0 23 68 0 0 chr20 33666280 33666324 -38487558 + GC_rich Low_complexity Low_complexity 1 44 0 347 296 136 23 chr20 33666344 33666520 -38487362 + MIR SINE MIR 67 262 0 226 275 147 9 chr20 33666538 33666647 -38487235 - L2 LINE L2 -4 3309 3186 458 242 76 15 chr20 33666649 33666781 -38487101 - MER5A DNA MER1_type -3 186 47 2439 71 14 0 chr20 33667243 33667539 -38486343 + AluSp SINE Alu 1 300 -13 953 152 7 0 chr20 33667612 33667763 -38486119 + AluJb SINE Alu 147 298 -14 2036 140 0 16 chr20 33668039 33668209 -38485673 - AluSx SINE Alu -10 302 138 2412 76 10 0 chr20 33668209 33668513 -38485369 - AluSp SINE Alu -6 307 1 2036 140 0 16 chr20 33668513 33668649 -38485233 - AluSx SINE Alu -174 138 1 25 0 0 0 chr20 33668652 33668677 -38485205 + AT_rich Low_complexity Low_complexity 1 25 0 2156 125 3 31 chr20 33668699 33669020 -38484862 + AluSx SINE Alu 1 312 0 2604 44 0 0 chr20 33669314 33669610 -38484272 - AluY SINE Alu -15 296 1 388 319 6 60 chr20 33669719 33669789 -38484093 + MER5A DNA MER1_type 9 81 -108 2402 93 0 3 chr20 33669789 33670099 -38483783 + AluSc SINE Alu 1 309 0 388 319 6 60 chr20 33670099 33670120 -38483762 + MER5A DNA MER1_type 81 102 -87 1970 142 0 0 chr20 33670120 33670401 -38483481 + AluSx SINE Alu 28 308 -4 388 319 6 60 chr20 33670401 33670490 -38483392 + MER5A DNA MER1_type 102 180 -9 188 286 36 0 chr20 33670496 33670552 -38483330 - MIR SINE MIR 0 262 205 555 290 67 21 chr20 33670708 33670901 -38482981 + MIR SINE MIR 61 262 0 317 232 30 20 chr20 33670905 33671004 -38482878 - L1ME LINE L1 -386 5735 5636 2534 81 0 3 chr20 33671113 33671422 -38482460 + AluSp SINE Alu 1 308 -5 2447 109 0 0 chr20 33671453 33671766 -38482116 + AluSq SINE Alu 1 313 0 2263 126 0 0 chr20 33671772 33672081 -38481801 + AluSg SINE Alu 1 309 -1 746 96 0 8 chr20 33672081 33672200 -38481682 + L1MA4A LINE L1 6176 6293 -10 1022 157 66 0 chr20 33672982 33673180 -38480702 - L1MD1 LINE L1 0 6242 6032 2396 98 0 0 chr20 33673274 33673579 -38480303 + AluSq SINE Alu 1 305 -8 323 242 115 51 chr20 33673597 33673754 -38480128 + L1MC4 LINE L1 7537 7703 -339 341 140 0 0 chr20 33673757 33673814 -38480068 + L1MB2 LINE L1 6076 6132 -39 487 229 37 0 chr20 33673822 33673931 -38479951 + FLAM_A SINE Alu 21 133 -9 617 187 134 11 chr20 33673978 33674165 -38479717 + L1MC4 LINE L1 7694 7903 -139 510 307 0 29 chr20 33674809 33674946 -38478936 - L2 LINE L2 -1 3312 3180 185 271 0 34 chr20 33675365 33675424 -38478458 - L2 LINE L2 -818 2496 2440 359 306 9 0 chr20 33675445 33675553 -38478329 - MIR SINE MIR -62 146 38 2364 112 0 0 chr20 33675775 33676087 -38477795 + AluSx SINE Alu 1 312 0 760 163 23 0 chr20 33676483 33676612 -38477270 - FLAM_C SINE Alu 0 133 2 244 320 20 27 chr20 33676731 33676881 -38477001 + L2 LINE L2 2829 2977 -336 1198 123 12 0 chr20 33676941 33677112 -38476770 - AluSg/x SINE Alu -4 308 136 1949 98 16 0 chr20 33677114 33677368 -38476514 - AluSx SINE Alu -17 295 38 2345 103 3 0 chr20 33677473 33677775 -38476107 + AluSg SINE Alu 1 303 -7 296 250 125 39 chr20 33677819 33677947 -38475935 + L2 LINE L2 3134 3272 0 2246 117 3 0 chr20 33677958 33678257 -38475625 + AluSp SINE Alu 1 300 -13 440 284 21 21 chr20 33678362 33678503 -38475379 + MIR SINE MIR 112 252 -10 1826 101 89 4 chr20 33678536 33678794 -38475088 + AluSg SINE Alu 1 315 0 295 29 0 0 chr20 33678794 33678829 -38475053 + (TAA)n Simple_repeat Simple_repeat 2 180 0 185 338 0 42 chr20 33679039 33679110 -38474772 - MIR SINE MIR -56 206 139 402 232 52 97 chr20 33679149 33679304 -38474578 + MIR3 SINE MIR 13 160 -48 2210 92 0 17 chr20 33679467 33679762 -38474120 + AluSc SINE Alu 1 290 -19 512 231 45 26 chr20 33679785 33679907 -38473975 - MIR SINE MIR -5 257 130 1871 138 0 14 chr20 33679907 33680190 -38473692 + AluSx SINE Alu 34 312 0 512 231 45 26 chr20 33680190 33680223 -38473659 - MIR SINE MIR -132 130 99 259 275 0 0 chr20 33680233 33680302 -38473580 - MIR SINE MIR 0 262 194 732 177 0 8 chr20 33680461 33680591 -38473291 - FLAM_C SINE Alu -4 129 1 596 262 20 36 chr20 33680612 33680802 -38473080 - L1MC4 LINE L1 0 8042 7855 1790 157 23 17 chr20 33680802 33681102 -38472780 - AluJb SINE Alu -10 302 1 596 262 20 36 chr20 33681102 33681159 -38472723 - L1MC4 LINE L1 -187 7855 7799 2385 66 0 30 chr20 33681273 33681575 -38472307 - AluY SINE Alu -18 293 1 212 278 53 60 chr20 33681639 33681772 -38472110 + MIR SINE MIR 74 205 -57 1941 118 27 0 chr20 33681815 33681916 -38471966 + AluSg SINE Alu 21 118 -192 207 0 0 0 chr20 33681916 33681939 -38471943 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1941 118 27 0 chr20 33681939 33682100 -38471782 + AluSg SINE Alu 118 290 -20 2465 74 0 3 chr20 33682120 33682418 -38471464 + AluY SINE Alu 1 297 -14 2401 91 0 3 chr20 33682713 33683022 -38470860 - AluSg SINE Alu -2 308 1 2103 94 22 4 chr20 33683071 33683387 -38470495 + AluSx SINE Alu 1 321 0 606 330 156 13 chr20 33683748 33683846 -38470036 - L2 LINE L2 -3 3310 3227 450 0 0 0 chr20 33683846 33683896 -38469986 + (TG)n Simple_repeat Simple_repeat 2 51 0 606 330 156 13 chr20 33683896 33684253 -38469629 - L2 LINE L2 -86 3227 2785 235 81 0 0 chr20 33684256 33684293 -38469589 - L2 LINE L2 0 3313 3277 189 74 0 0 chr20 33684517 33684544 -38469338 + (TCCCC)n Simple_repeat Simple_repeat 4 30 0 21 57 0 0 chr20 33684954 33684989 -38468893 + GC_rich Low_complexity Low_complexity 1 35 0 25 31 0 0 chr20 33685001 33685033 -38468849 + GC_rich Low_complexity Low_complexity 1 32 0 199 231 0 0 chr20 33686751 33686790 -38467092 + MIR SINE MIR 224 262 0 266 227 113 10 chr20 33686880 33686977 -38466905 + MIR SINE MIR 96 202 -60 2267 118 10 0 chr20 33688110 33688415 -38465467 - AluSx SINE Alu -4 308 1 2541 67 0 6 chr20 33688419 33688752 -38465130 - AluY SINE Alu 0 331 1 1707 157 15 0 chr20 33688764 33689038 -38464844 + AluSx SINE Alu 5 282 -30 654 225 8 0 chr20 33689075 33689204 -38464678 - FLAM_C SINE Alu -3 130 1 1583 162 64 0 chr20 33689275 33689569 -38464313 - AluJb SINE Alu 0 315 5 2131 108 13 29 chr20 33689577 33689891 -38463991 - AluSp SINE Alu -4 309 1 1766 153 16 26 chr20 33690121 33690429 -38463453 - AluJo SINE Alu -7 305 1 1575 141 65 30 chr20 33690741 33690882 -38463000 - AluJo SINE Alu -40 272 137 2308 98 13 0 chr20 33690882 33691187 -38462695 - AluSp SINE Alu -4 309 1 1575 141 65 30 chr20 33691187 33691308 -38462574 - AluJo SINE Alu -175 137 1 2496 54 0 10 chr20 33691784 33692082 -38461800 - AluY SINE Alu -16 295 1 399 145 0 0 chr20 33692385 33692447 -38461435 - L1ME1 LINE L1 -200 5966 5905 577 163 10 0 chr20 33692447 33692545 -38461337 - AluSg/x SINE Alu -16 293 195 352 287 10 0 chr20 33692546 33692647 -38461235 - L1ME1 LINE L1 -251 5915 5814 459 201 121 60 chr20 33692660 33692809 -38461073 - FRAM SINE Alu -24 152 1 1744 156 14 34 chr20 33692818 33692975 -38460907 - AluJo SINE Alu -22 290 131 2167 104 0 61 chr20 33692975 33693302 -38460580 - AluSp SINE Alu -6 307 1 2397 93 10 0 chr20 33693306 33693607 -38460275 - AluSp SINE Alu -9 304 1 1744 156 14 34 chr20 33693607 33693739 -38460143 - AluJo SINE Alu -184 128 2 2245 102 24 7 chr20 33694054 33694349 -38459533 + AluSx SINE Alu 1 300 -12 501 45 0 0 chr20 33695570 33695636 -38458246 - AluSp SINE Alu -12 301 236 1413 67 11 6 chr20 33695636 33695814 -38458068 - AluSp SINE Alu -134 179 1 1007 114 66 36 chr20 33695814 33695979 -38457903 - AluSg/x SINE Alu -18 294 125 1276 196 19 79 chr20 33696308 33696625 -38457257 - AluJo SINE Alu -13 299 2 234 0 0 0 chr20 33696630 33696656 -38457226 + (T)n Simple_repeat Simple_repeat 1 26 0 2467 80 0 0 chr20 33696904 33697204 -38456678 - AluY SINE Alu -11 300 1 663 256 6 6 chr20 33697211 33697387 -38456495 - L1PB4 LINE L1 0 6156 5981 234 0 0 0 chr20 33697389 33697415 -38456467 + (TCTTG)n Simple_repeat Simple_repeat 2 27 0 2163 99 7 17 chr20 33697415 33697717 -38456165 - AluSq SINE Alu -14 299 1 1092 96 0 0 chr20 33697717 33697853 -38456029 - AluSq/x SINE Alu -176 136 1 2255 86 52 0 chr20 33698653 33698943 -38454939 + AluSx SINE Alu 1 305 -7 463 194 134 15 chr20 33699299 33699433 -38454449 + MIR SINE MIR 110 259 -3 2200 76 3 92 chr20 33700752 33701080 -38452802 + AluSc SINE Alu 1 299 -10 1191 170 117 5 chr20 33701411 33701634 -38452248 + AluJo SINE Alu 38 285 -27 366 80 0 0 chr20 33701634 33701684 -38452198 + (TGGA)n Simple_repeat Simple_repeat 3 52 0 198 265 84 36 chr20 33702005 33702088 -38451794 + MIR SINE MIR 54 140 -122 345 308 75 0 chr20 33703618 33703738 -38450144 + MER3 DNA MER1_type 3 131 -78 5543 143 50 19 chr20 33704303 33705280 -38448602 + Tigger7 DNA MER2_type 3 1009 -1478 1359 115 74 4 chr20 33705278 33705522 -38448360 + Tigger7 DNA MER2_type 2227 2487 0 * 2018 135 20 13 chr20 33705619 33705922 -38447960 - AluSx SINE Alu -7 305 1 2017 113 19 56 chr20 33706411 33706596 -38447286 - AluSx SINE Alu -3 309 139 2101 117 0 20 chr20 33706596 33706895 -38446987 - AluSq SINE Alu -3 310 18 2017 113 19 56 chr20 33706895 33707029 -38446853 - AluSx SINE Alu -173 139 2 193 185 93 0 chr20 33707062 33707116 -38446766 - MIR SINE MIR -93 169 111 2198 129 0 10 chr20 33707725 33708035 -38445847 - AluSx SINE Alu -5 307 1 2094 149 0 13 chr20 33708567 33708883 -38444999 - AluSx SINE Alu 0 312 1 3129 66 2 49 chr20 33710434 33710904 -38442978 - LTR7 LTR ERV1 -2 448 1 231 157 0 59 chr20 33711160 33711211 -38442671 - Alu SINE Alu -168 134 87 1412 161 0 9 chr20 33711211 33711434 -38442448 - AluJo SINE Alu -91 221 1 2126 99 7 3 chr20 33712305 33712587 -38441295 - AluSx SINE Alu -29 283 1 1511 196 35 0 chr20 33713372 33713657 -38440225 - AluJo SINE Alu -17 295 1 1533 150 105 8 chr20 33715907 33716174 -38437708 + AluSx SINE Alu 1 293 -19 301 152 0 0 chr20 33716734 33716780 -38437102 + AluJb SINE Alu 2 47 -261 1522 165 64 4 chr20 33716800 33717067 -38436815 + AluJb SINE Alu 29 311 -1 410 209 65 78 chr20 33717074 33717095 -38436787 - MER33 DNA MER1_type -2329 295 275 1704 128 70 4 chr20 33717095 33717353 -38436529 + AluSq SINE Alu 1 275 -38 410 209 65 78 chr20 33717353 33717561 -38436321 - MER33 DNA MER1_type -2349 275 69 1275 221 35 18 chr20 33720202 33720355 -38433527 - AluJo SINE Alu -22 290 128 2044 127 0 51 chr20 33720355 33720671 -38433211 - AluSx SINE Alu -12 300 1 1275 221 35 18 chr20 33720671 33720802 -38433080 - AluJo SINE Alu -184 128 1 1977 158 7 0 chr20 33722213 33722511 -38431371 - AluSx SINE Alu -10 302 3 1734 120 28 12 chr20 33723200 33723450 -38430432 - AluSq SINE Alu -59 254 1 1749 162 21 21 chr20 33724290 33724580 -38429302 - AluJo SINE Alu -22 290 1 454 169 0 0 chr20 33724736 33724807 -38429075 + AluJ/FLAM SINE Alu 3 73 -239 977 83 0 0 chr20 33725413 33725546 -38428336 + FLAM_C SINE Alu 1 133 0 217 270 101 22 chr20 33726778 33726867 -38427015 - L2 LINE L2 -752 2562 2467 806 143 41 41 chr20 33727380 33727527 -38426355 - FRAM SINE Alu -5 171 25 355 275 80 14 chr20 33727649 33727787 -38426095 - MIR3 SINE MIR -48 160 14 347 318 132 5 chr20 33729461 33729681 -38424201 - L1M4 LINE L1 -3009 3137 2890 191 306 0 32 chr20 33730193 33730255 -38423627 - L2 LINE L2 0 3272 3213 553 158 119 0 chr20 33732233 33732334 -38421548 + AluJb SINE Alu 13 125 -187 1919 94 59 7 chr20 33732349 33732636 -38421246 + AluY SINE Alu 1 302 -9 244 257 14 0 chr20 33732640 33732710 -38421172 - MER5A DNA MER1_type -21 168 98 607 193 9 0 chr20 33732739 33732848 -38421034 - AluJb SINE Alu -66 246 137 1321 127 0 23 chr20 33734167 33734388 -38419494 + AluSg/x SINE Alu 81 296 -16 316 200 160 30 chr20 33734392 33734492 -38419390 + MIR SINE MIR 136 248 -14 1422 156 17 35 chr20 33734619 33734907 -38418975 + AluJb SINE Alu 1 283 -29 412 296 174 6 chr20 33735069 33735241 -38418641 + MIR SINE MIR 50 250 -12 247 302 102 20 chr20 33735293 33735444 -38418438 - MIR SINE MIR -69 139 11 254 246 0 15 chr20 33735517 33735582 -38418300 + CT-rich Low_complexity Low_complexity 3 66 0 2256 62 3 7 chr20 33735600 33735892 -38417990 - AluY SINE Alu -20 291 1 2442 50 3 0 chr20 33735949 33736247 -38417635 + AluY SINE Alu 2 300 -11 944 169 30 0 chr20 33736264 33736430 -38417452 + AluJo SINE Alu 120 290 -22 618 187 8 15 chr20 33736444 33736578 -38417304 - L1MC4 LINE L1 -14 8028 7896 1732 101 0 0 chr20 33736578 33736815 -38417067 - AluSq SINE Alu -76 237 1 1054 67 0 8 chr20 33736819 33736953 -38416929 - AluSp SINE Alu -180 133 1 321 239 223 23 chr20 33737131 33737261 -38416621 + L2 LINE L2 2927 3082 -190 2099 125 3 0 chr20 33737302 33737606 -38416276 + AluSq SINE Alu 1 305 -8 1957 134 10 7 chr20 33737608 33737915 -38415967 + AluSx SINE Alu 1 308 -4 1305 157 139 8 chr20 33737957 33738224 -38415658 - AluJb SINE Alu 0 302 1 205 303 144 15 chr20 33738687 33738739 -38415143 + L2 LINE L2 2742 2786 -528 2116 88 0 33 chr20 33738739 33739044 -38414838 - AluSx SINE Alu -17 295 1 205 303 144 15 chr20 33739044 33739123 -38414759 + L2 LINE L2 2786 2890 -424 285 222 56 0 chr20 33739193 33739265 -38414617 - MIR SINE MIR -11 251 176 2037 93 0 0 chr20 33739348 33739616 -38414266 + AluSg SINE Alu 1 268 -42 24 32 0 0 chr20 33739630 33739661 -38414221 + AT_rich Low_complexity Low_complexity 1 31 0 2108 123 0 0 chr20 33739810 33740120 -38413762 - AluSg SINE Alu 0 310 1 2198 105 0 0 chr20 33740148 33740444 -38413438 - AluSg SINE Alu -14 296 1 929 156 0 6 chr20 33740865 33741025 -38412857 - FRAM SINE Alu -11 165 7 244 258 0 17 chr20 33741140 33741206 -38412676 + MIR SINE MIR 86 151 -57 1712 100 0 0 chr20 33741233 33741462 -38412420 - AluSq SINE Alu -84 229 1 909 106 8 0 chr20 33741501 33741633 -38412249 + FLAM_C SINE Alu 1 133 0 2283 87 0 0 chr20 33741831 33742130 -38411752 - AluSx SINE Alu -13 299 1 896 87 0 51 chr20 33742220 33742358 -38411524 + FLAM_C SINE Alu 3 133 0 21 0 0 0 chr20 33742629 33742650 -38411232 + GC_rich Low_complexity Low_complexity 1 21 0 22 56 0 0 chr20 33742736 33742772 -38411110 + GC_rich Low_complexity Low_complexity 1 36 0 21 57 0 0 chr20 33742875 33742910 -38410972 + GC_rich Low_complexity Low_complexity 1 35 0 442 271 132 0 chr20 33743103 33743247 -38410635 + MIR SINE MIR 4 166 -96 268 344 78 23 chr20 33743296 33743424 -38410458 - L2 LINE L2 -2 3311 3177 422 303 142 32 chr20 33743624 33743708 -38410174 - MIR SINE MIR -18 244 171 2072 93 26 3 chr20 33743708 33744010 -38409872 - AluSx SINE Alu -2 310 2 422 303 142 32 chr20 33744010 33744143 -38409739 - MIR SINE MIR -91 171 3 471 231 77 21 chr20 33744244 33744387 -38409495 - MIR SINE MIR -31 231 81 306 312 156 14 chr20 33745041 33745182 -38408700 - L2 LINE L2 -565 2749 2589 192 315 74 0 chr20 33745193 33745247 -38408635 - L2 LINE L2 -46 3267 3210 427 310 86 11 chr20 33745287 33745461 -38408421 - MIR SINE MIR -48 214 28 222 320 30 30 chr20 33745757 33745857 -38408025 - L2 LINE L2 -15 3257 3158 * 286 280 131 0 chr20 33745824 33745931 -38407951 + MIR3 SINE MIR 88 208 0 253 214 57 132 chr20 33746208 33746324 -38407558 + L2 LINE L2 2640 2742 -572 1428 170 74 0 chr20 33746324 33746594 -38407288 + AluJb SINE Alu 3 292 -20 253 214 57 132 chr20 33746594 33746636 -38407246 + L2 LINE L2 2742 2786 -528 558 286 228 19 chr20 33746638 33746963 -38406919 + L2 LINE L2 2919 3311 -2 194 147 35 48 chr20 33747103 33747161 -38406721 + MIR SINE MIR 92 191 -61 582 195 127 0 chr20 33747377 33747495 -38406387 - FLAM_C SINE Alu 0 133 1 2250 104 7 0 chr20 33747565 33747873 -38406009 + AluSx SINE Alu 1 310 -2 2046 94 22 4 chr20 33748208 33748515 -38405367 + AluSx SINE Alu 1 312 0 2290 66 7 13 chr20 33748910 33749215 -38404667 - AluY SINE Alu -8 303 1 1951 115 41 7 chr20 33749215 33749510 -38404372 - AluSx SINE Alu -5 307 3 2178 88 0 7 chr20 33749824 33750118 -38403764 + AluSq SINE Alu 6 297 -16 2232 82 3 3 chr20 33750310 33750604 -38403278 + AluSg SINE Alu 1 294 -16 228 228 222 4 chr20 33751170 33751282 -38402600 + MIR SINE MIR 3 146 -62 198 98 0 146 chr20 33751398 33751439 -38402443 - MIR SINE MIR -115 147 113 1887 81 88 0 chr20 33751632 33751905 -38401977 - AluSg SINE Alu -11 299 3 2162 49 46 3 chr20 33753435 33753719 -38400163 - AluY SINE Alu -15 296 1 874 167 8 0 chr20 33753858 33753990 -38399892 + FLAM_C SINE Alu 1 133 0 2053 114 0 19 chr20 33754222 33754530 -38399352 - AluSx SINE Alu -10 302 1 1863 136 20 3 chr20 33755162 33755457 -38398425 - AluJb SINE Alu -12 300 1 216 0 0 0 chr20 33755503 33755527 -38398355 + (T)n Simple_repeat Simple_repeat 1 24 0 818 114 0 0 chr20 33755547 33755661 -38398221 + AluSc SINE Alu 189 302 -7 1047 139 21 16 chr20 33755727 33755914 -38397968 + AluJb SINE Alu 114 301 -11 401 113 16 16 chr20 33756934 33756996 -38396886 + AluJ/FLAM SINE Alu 1 62 -240 370 240 113 98 chr20 33757455 33757659 -38396223 - L1MC5 LINE L1 -32 7929 7723 919 184 0 0 chr20 33757773 33757936 -38395946 + FRAM SINE Alu 1 162 -14 436 211 117 16 chr20 33758048 33758176 -38395706 - FLAM_A SINE Alu -1 141 1 2397 90 0 0 chr20 33758291 33758601 -38395281 - AluSx SINE Alu -2 310 1 1492 170 57 7 chr20 33758658 33758941 -38394941 - AluSg SINE Alu -13 297 1 386 263 143 23 chr20 33759655 33759830 -38394052 + MIR SINE MIR 9 204 -58 2827 173 37 74 chr20 33760337 33760497 -38393385 - L1MB8 LINE L1 0 6178 6014 2047 119 3 3 chr20 33760497 33760799 -38393083 + AluSx SINE Alu 2 303 -9 2827 173 37 74 chr20 33760799 33761368 -38392514 - L1MB8 LINE L1 -164 6014 5476 30 45 0 0 chr20 33763158 33763202 -38390680 + AT_rich Low_complexity Low_complexity 1 44 0 789 154 0 0 chr20 33763202 33763319 -38390563 - FLAM_C SINE Alu -15 118 2 2275 88 7 0 chr20 33763503 33763809 -38390073 - AluSx SINE Alu -4 308 1 1875 56 4 4 chr20 33764166 33764400 -38389482 - L1PA3 LINE L1 -5 6150 5917 273 319 157 6 chr20 33764448 33764614 -38389268 + MIR SINE MIR 65 255 -7 2109 92 0 0 chr20 33764760 33765080 -38388802 - AluY SINE Alu 0 320 1 341 230 435 6 chr20 33765080 33765241 -38388641 - MIR SINE MIR -4 258 29 234 0 0 0 chr20 33765829 33765855 -38388027 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 1021 213 53 38 chr20 33766134 33766453 -38387429 - MER33 DNA MER1_type 0 324 1 2105 128 0 0 chr20 33766545 33766849 -38387033 - AluSx SINE Alu -8 304 1 279 0 0 0 chr20 33767135 33767166 -38386716 + (T)n Simple_repeat Simple_repeat 1 31 0 1861 83 4 0 chr20 33767166 33767407 -38386475 - AluSc SINE Alu -67 242 1 426 65 0 0 chr20 33767685 33767747 -38386135 + (TATG)n Simple_repeat Simple_repeat 1 62 0 1469 205 3 3 chr20 33767753 33768036 -38385846 - AluJo SINE Alu -29 283 1 575 231 39 15 chr20 33768342 33768472 -38385410 - FLAM_A SINE Alu 0 133 1 260 288 0 0 chr20 33768474 33768540 -38385342 + MIR3 SINE MIR 118 183 -25 1386 157 63 24 chr20 33770741 33771028 -38382854 - AluJo SINE Alu -14 298 1 455 200 160 0 chr20 33771044 33771169 -38382713 - L1MA10 LINE L1 -7 6327 6183 24 0 0 0 chr20 33772639 33772663 -38381219 + AT_rich Low_complexity Low_complexity 1 24 0 2294 93 0 7 chr20 33773236 33773546 -38380336 - AluSg1 SINE Alu -1 308 1 1934 148 0 0 chr20 33773779 33774082 -38379800 - AluJo SINE Alu -9 303 1 242 259 152 45 chr20 33774652 33774764 -38379118 - MER5A DNA MER1_type -3 186 63 203 259 103 86 chr20 33774854 33774970 -38378912 + MIR SINE MIR 80 197 -65 1964 141 7 0 chr20 33775651 33775956 -38377926 - AluSx SINE Alu -5 307 1 1427 166 40 30 chr20 33776193 33776364 -38377518 - AluJo SINE Alu -8 304 127 2371 82 0 0 chr20 33776364 33776669 -38377213 - AluSq SINE Alu -8 305 1 1427 166 40 30 chr20 33776669 33776798 -38377084 - AluJo SINE Alu -185 127 1 822 139 0 31 chr20 33777251 33777380 -38376502 + FLAM_C SINE Alu 2 126 -17 310 267 47 12 chr20 33777382 33777468 -38376414 + L1MC4 LINE L1 6621 6709 -1333 302 191 59 29 chr20 33777407 33777475 -38376407 - L1MCa LINE L1 -4362 2064 1995 * 788 156 0 15 chr20 33778793 33778928 -38374954 - FLAM_C SINE Alu 0 133 1 1300 145 94 0 chr20 33779048 33779282 -38374600 - AluJb SINE Alu -2 310 55 189 0 0 0 chr20 33779305 33779326 -38374556 + (T)n Simple_repeat Simple_repeat 1 21 0 2156 109 0 3 chr20 33779374 33779677 -38374205 - AluSg SINE Alu -8 302 1 933 119 0 15 chr20 33780265 33780399 -38373483 - FLAM_C SINE Alu 0 133 2 1898 211 107 26 chr20 33782274 33782718 -38371164 - L1MC4 LINE L1 -2 8040 7531 2014 130 20 10 chr20 33782718 33783018 -38370864 + AluSx SINE Alu 1 303 -9 1898 211 107 26 chr20 33783018 33783190 -38370692 - L1MC4 LINE L1 -511 7531 7374 1229 130 5 5 chr20 33783190 33783375 -38370507 - AluSq SINE Alu 0 313 129 1788 184 10 10 chr20 33783427 33783732 -38370150 - AluJo SINE Alu -7 305 1 2292 120 0 0 chr20 33783984 33784284 -38369598 - AluSp SINE Alu -13 300 1 747 165 0 0 chr20 33784313 33784434 -38369448 + FLAM_A SINE Alu 1 121 -12 21 0 0 0 chr20 33784447 33784468 -38369414 + AT_rich Low_complexity Low_complexity 1 21 0 357 255 89 19 chr20 33784491 33784648 -38369234 - L1ME4a LINE L1 -79 6042 5875 1754 147 11 0 chr20 33784814 33785080 -38368802 - AluJo SINE Alu 0 312 44 2174 124 0 16 chr20 33785321 33785628 -38368254 - AluSq SINE Alu -11 302 1 2421 92 0 0 chr20 33786678 33786970 -38366912 - AluSg SINE Alu -18 292 1 249 162 0 0 chr20 33787381 33787418 -38366464 - AluJo SINE Alu -266 37 1 797 210 116 68 chr20 33787565 33788046 -38365836 - MLT1H LTR MaLR -4 545 1 269 227 171 11 chr20 33789002 33789090 -38364792 + MIR SINE MIR 13 114 -148 229 183 97 11 chr20 33789275 33789368 -38364514 - Charlie7 DNA MER1_type -69 2543 2443 1316 160 14 0 chr20 33790053 33790265 -38363617 + AluJb SINE Alu 88 302 -10 544 268 79 51 chr20 33790524 33790778 -38363104 - MIR SINE MIR 0 262 2 234 292 0 14 chr20 33790876 33790948 -38362934 - L2 LINE L2 -214 3058 2988 2183 112 14 3 chr20 33791180 33791476 -38362406 + AluSx SINE Alu 1 299 -13 277 297 45 18 chr20 33791763 33791874 -38362008 + L2 LINE L2 3158 3271 -1 966 126 6 11 chr20 33792386 33792560 -38361322 + (TTCC)n Simple_repeat Simple_repeat 4 176 0 2120 132 16 13 chr20 33792573 33792884 -38360998 - AluSx SINE Alu 0 312 1 203 239 0 0 chr20 33792991 33793037 -38360845 + MIR SINE MIR 105 150 -112 1146 145 21 31 chr20 33793507 33793700 -38360182 - AluJb SINE Alu -14 298 108 518 81 14 0 chr20 33793708 33793782 -38360100 - MADE1 DNA Mariner 0 80 6 1381 161 0 18 chr20 33793803 33794027 -38359855 - AluJo SINE Alu -92 220 1 322 160 11 85 chr20 33794116 33794210 -38359672 - L1ME4a LINE L1 -74 6047 5961 2198 206 52 66 chr20 33794215 33794372 -38359510 - MLT1E LTR MaLR -8 585 427 2212 121 0 0 chr20 33794372 33794661 -38359221 + AluSx SINE Alu 6 294 -18 2198 206 52 66 chr20 33794661 33794904 -38358978 - MLT1E LTR MaLR -166 427 193 2365 88 7 0 chr20 33794904 33795200 -38358682 - AluSp SINE Alu -15 298 1 2198 206 52 66 chr20 33795200 33795391 -38358491 - MLT1E LTR MaLR -400 193 1 367 308 42 8 chr20 33795421 33795541 -38358341 - L1ME4a LINE L1 -206 5915 5792 1985 158 0 10 chr20 33796162 33796466 -38357416 - AluJo SINE Alu -11 301 1 2258 110 23 0 chr20 33796515 33796816 -38357066 - AluSx SINE Alu -4 308 1 1243 148 0 48 chr20 33796921 33797150 -38356732 - AluJo SINE Alu 0 312 95 22 0 0 0 chr20 33797160 33797182 -38356700 + AT_rich Low_complexity Low_complexity 1 22 0 604 209 15 8 chr20 33797832 33797966 -38355916 + MIR SINE MIR 3 137 -125 2172 118 0 26 chr20 33798170 33798474 -38355408 + AluSg SINE Alu 1 296 -14 2440 97 0 3 chr20 33798474 33798784 -38355098 + AluSq SINE Alu 1 309 -4 831 71 0 0 chr20 33798945 33799043 -38354839 - AluSc SINE Alu -211 98 1 1525 102 208 12 chr20 33799244 33799489 -38354393 + AluSg1 SINE Alu 1 293 -16 1875 171 0 0 chr20 33799578 33799871 -38354011 - AluJb SINE Alu -5 307 15 1569 191 16 20 chr20 33799885 33800188 -38353694 - AluJb SINE Alu -10 302 1 1291 129 11 0 chr20 33800198 33800384 -38353498 - AluSg/x SINE Alu -2 310 123 2169 123 0 7 chr20 33800405 33800713 -38353169 - AluSx SINE Alu -6 306 1 2341 101 0 16 chr20 33801167 33801473 -38352409 - AluSq SINE Alu -12 301 1 708 250 87 63 chr20 33802240 33802349 -38351533 - MIR SINE MIR 0 262 157 2141 148 0 3 chr20 33802349 33802659 -38351223 + AluJb SINE Alu 1 309 -3 708 250 87 63 chr20 33802659 33802801 -38351081 - MIR SINE MIR -105 157 5 2492 100 0 0 chr20 33802861 33803172 -38350710 - AluSx SINE Alu 0 312 2 196 342 61 0 chr20 33803430 33803544 -38350338 + MIR3 SINE MIR 66 186 -22 1979 138 50 0 chr20 33803664 33803946 -38349936 + AluJb SINE Alu 3 298 -14 337 137 0 0 chr20 33803946 33803997 -38349885 + Alu SINE Alu 1 51 -250 315 208 0 52 chr20 33803971 33804048 -38349834 + AluJo/FRAM SINE Alu 201 273 -29 * 1157 16 0 0 chr20 33804170 33804297 -38349585 - AluYb8 SINE Alu -7 311 185 418 222 30 67 chr20 33804611 33804746 -38349136 - MIR SINE MIR -66 196 67 815 227 58 36 chr20 33805098 33805406 -38348476 - MER39 LTR ERV1 0 707 393 356 324 83 0 chr20 33805410 33805555 -38348327 - MER34 LTR ERV1 -382 160 4 1988 158 0 7 chr20 33805937 33806234 -38347648 - AluSx SINE Alu -16 296 2 821 153 227 11 chr20 33806324 33806500 -38347382 - MER21B LTR ERV1 -371 492 279 246 109 164 0 chr20 33806531 33806586 -38347296 - MER21A LTR ERV1 -867 64 1 2959 153 28 46 chr20 33806685 33806859 -38347023 - MER21A-int LTR ERV1 -56 4135 3959 2383 116 0 0 chr20 33806859 33807161 -38346721 - AluSq SINE Alu -11 302 1 2959 153 28 46 chr20 33807161 33807592 -38346290 - MER21A-int LTR ERV1 -232 3959 3541 2276 90 35 3 chr20 33807592 33807881 -38346001 + AluSq SINE Alu 3 300 -13 4168 177 34 19 chr20 33807891 33808169 -38345713 - MER21A-int LTR ERV1 -1719 2472 2200 2093 141 0 25 chr20 33808169 33808352 -38345530 - AluSx SINE Alu 0 312 139 2367 83 0 0 chr20 33808352 33808659 -38345223 - AluY SINE Alu 0 311 1 2093 141 0 25 chr20 33808659 33808795 -38345087 - AluSx SINE Alu -173 139 1 4168 177 34 19 chr20 33808795 33809312 -38344570 - MER21A-int LTR ERV1 -1991 2200 1665 2100 84 0 131 chr20 33809357 33809700 -38344182 - AluSx SINE Alu -14 298 1 220 212 152 30 chr20 33809939 33810005 -38343877 - MIR SINE MIR -70 192 119 244 328 165 1 chr20 33810301 33810426 -38343456 + MIR SINE MIR 20 162 -83 838 277 8 4 chr20 33811715 33811950 -38341932 + MIR SINE MIR 2 237 -25 232 253 48 48 chr20 33812553 33812636 -38341246 + MIR SINE MIR 71 153 -55 2313 94 3 0 chr20 33812959 33813257 -38340625 + AluSx SINE Alu 2 300 -12 191 324 0 14 chr20 33813456 33813527 -38340355 - MIR SINE MIR -19 243 174 2153 127 0 7 chr20 33813726 33813895 -38339987 - AluJb SINE Alu -10 302 134 2305 96 7 0 chr20 33813895 33814186 -38339696 - AluSg SINE Alu -17 293 1 2153 127 0 7 chr20 33814186 33814316 -38339566 - AluJb SINE Alu -178 134 5 370 117 33 0 chr20 33814640 33814700 -38339182 - AluJ/FRAM SINE Alu -22 280 219 365 269 26 58 chr20 33814709 33814865 -38339017 - MIR3 SINE MIR -13 195 45 2411 83 3 0 chr20 33815384 33815684 -38338198 + AluSx SINE Alu 1 301 -11 374 275 98 95 chr20 33815941 33816246 -38337636 + L2 LINE L2 2967 3272 0 474 324 50 12 chr20 33816348 33816598 -38337284 + MIR SINE MIR 6 261 -1 1067 68 15 0 chr20 33816776 33816908 -38336974 - AluSx SINE Alu -12 300 167 1312 112 0 0 chr20 33817013 33817182 -38336700 - AluSx SINE Alu -143 169 1 1000 176 6 6 chr20 33817492 33817657 -38336225 - FRAM SINE Alu -11 165 1 2271 117 0 0 chr20 33818496 33818805 -38335077 - AluSx SINE Alu -3 309 1 246 337 114 10 chr20 33819475 33819668 -38334214 - MIR SINE MIR -48 214 2 386 238 80 3 chr20 33820261 33820408 -38333474 + MIR SINE MIR 23 183 -62 216 261 108 0 chr20 33820460 33820525 -38333357 - L2 LINE L2 -94 3178 3107 1813 129 3 97 chr20 33820978 33821224 -38332658 - AluJo SINE Alu -4 308 101 2296 122 3 0 chr20 33821224 33821535 -38332347 - AluSx SINE Alu 0 312 1 1813 129 3 97 chr20 33821535 33821628 -38332254 - AluJo SINE Alu -211 101 1 690 367 106 10 chr20 33822341 33823051 -38330831 + L2 LINE L2 2510 3313 0 1559 148 115 4 chr20 33823104 33823374 -38330508 - AluJb SINE Alu -9 303 4 205 340 0 43 chr20 33824447 33824541 -38329341 + L2 LINE L2 3183 3272 0 265 187 33 66 chr20 33824545 33824636 -38329246 + MIR SINE MIR 95 182 -80 2441 68 20 0 chr20 33824770 33824894 -38328988 + AluY SINE Alu 3 123 -188 243 0 0 0 chr20 33824894 33824921 -38328961 + (TAA)n Simple_repeat Simple_repeat 2 28 0 2441 68 20 0 chr20 33824921 33825092 -38328790 + AluY SINE Alu 123 304 -7 2437 86 3 0 chr20 33825234 33825538 -38328344 - AluSp SINE Alu -8 305 1 332 262 24 0 chr20 33825892 33825976 -38327906 - MIR3 SINE MIR -40 168 83 2002 81 24 110 chr20 33826021 33826221 -38327661 - AluSq SINE Alu -7 306 145 2278 109 0 10 chr20 33826221 33826532 -38327350 - AluSc SINE Alu -1 308 1 2002 81 24 110 chr20 33826532 33826666 -38327216 - AluSq SINE Alu -168 145 1 1551 99 32 0 chr20 33826889 33827110 -38326772 + MER30 DNA MER1_type 3 230 0 202 220 267 0 chr20 33827182 33827336 -38326546 + L2 LINE L2 2783 2971 -342 276 30 0 0 chr20 33827339 33827372 -38326510 + (ATTG)n Simple_repeat Simple_repeat 4 36 0 2206 90 0 4 chr20 33827372 33827650 -38326232 - AluSc SINE Alu -32 277 1 38 22 0 0 chr20 33827653 33827698 -38326184 + AT_rich Low_complexity Low_complexity 1 45 0 243 309 202 0 chr20 33827835 33828023 -38325859 - L2 LINE L2 -569 2745 2520 319 140 0 0 chr20 33828070 33828120 -38325762 + Alu SINE Alu 249 298 -4 952 190 0 0 chr20 33828129 33828287 -38325595 + AluJo SINE Alu 1 158 -154 233 267 17 26 chr20 33828871 33828987 -38324895 + L2 LINE L2 2932 3046 -267 1780 138 75 11 chr20 33829675 33829957 -38323925 - AluJo SINE Alu -12 300 1 1880 151 10 0 chr20 33829968 33830260 -38323622 - AluJo SINE Alu -14 298 4 2084 121 0 46 chr20 33830268 33830591 -38323291 - AluSx SINE Alu -4 308 1 922 200 91 17 chr20 33830863 33831093 -38322789 - MER39 LTR ERV1 -13 694 448 2318 96 10 0 chr20 33831145 33831438 -38322444 + AluSx SINE Alu 1 296 -16 262 284 10 49 chr20 33831508 33831610 -38322272 - LTR48B LTR ERV1 -543 101 4 252 179 66 113 chr20 33832828 33832934 -38320948 + MIR SINE MIR 45 145 -63 21 0 0 0 chr20 33836324 33836345 -38317537 + AT_rich Low_complexity Low_complexity 1 21 0 2233 104 17 0 chr20 33836403 33836702 -38317180 - AluSx SINE Alu -8 304 1 208 250 0 18 chr20 33837505 33837561 -38316321 + MIR SINE MIR 106 160 -102 2040 99 43 13 chr20 33837821 33838123 -38315759 + AluSq SINE Alu 1 311 -2 210 307 87 55 chr20 33838135 33838262 -38315620 + MIR SINE MIR 37 167 -95 223 341 56 24 chr20 33838673 33838799 -38315083 - L2 LINE L2 0 3272 3143 2097 167 19 6 chr20 33838800 33839160 -38314722 - MLT1A1 LTR MaLR 0 365 1 6129 198 121 36 chr20 33839160 33840132 -38313750 - MLT1A1-int LTR MaLR 0 1735 847 1960 133 69 30 chr20 33840132 33840493 -38313389 - THE1C LTR MaLR 0 375 1 6129 198 121 36 chr20 33840493 33840565 -38313317 - MLT1A1-int LTR MaLR -888 847 783 1693 154 23 40 chr20 33840565 33840864 -38313018 - AluJo SINE Alu -16 296 3 6129 198 121 36 chr20 33840864 33841337 -38312545 - MLT1A1-int LTR MaLR -952 783 72 2100 134 3 3 chr20 33841337 33841636 -38312246 - AluSx SINE Alu -13 299 1 6129 198 121 36 chr20 33841636 33841715 -38312167 - MLT1A1-int LTR MaLR -1663 72 1 1774 174 54 37 chr20 33841715 33841919 -38311963 - MLT1A1 LTR MaLR 0 365 151 1914 155 10 20 chr20 33841919 33842223 -38311659 - AluJo SINE Alu -11 301 1 1774 174 54 37 chr20 33842223 33842368 -38311514 - MLT1A1 LTR MaLR -214 151 10 210 278 38 60 chr20 33842505 33842638 -38311244 - L2 LINE L2 -254 3059 2930 229 182 0 121 chr20 33842745 33842811 -38311071 + MIR SINE MIR 193 250 -12 556 223 54 0 chr20 33843319 33843449 -38310433 - MIR SINE MIR -99 163 27 200 274 27 68 chr20 33843737 33843883 -38309999 - MIR3 SINE MIR -24 184 45 2101 136 0 7 chr20 33845161 33845463 -38308419 - AluSx SINE Alu -12 300 1 2665 84 6 6 chr20 33846072 33846427 -38307455 - THE1A LTR MaLR 0 355 1 1759 166 35 0 chr20 33846866 33847026 -38306856 - AluJo SINE Alu -18 294 118 279 0 0 0 chr20 33847026 33847057 -38306825 + (TG)n Simple_repeat Simple_repeat 2 32 0 1759 166 35 0 chr20 33847057 33847180 -38306702 - AluJo SINE Alu -194 118 1 2120 123 7 0 chr20 33847493 33847793 -38306089 - AluSx SINE Alu -10 302 1 386 379 0 0 chr20 33847798 33847996 -38305886 - L1ME LINE L1 -298 5823 5626 743 287 22 38 chr20 33848101 33848470 -38305412 - L2 LINE L2 -52 3261 2899 204 209 0 0 chr20 33848478 33848521 -38305361 + CT-rich Low_complexity Low_complexity 2 44 0 1715 177 7 13 chr20 33848566 33848865 -38305017 + AluJb SINE Alu 1 297 -15 1954 126 7 3 chr20 33848868 33849154 -38304728 + AluSx SINE Alu 1 287 -25 293 210 58 94 chr20 33849658 33849722 -38304160 - MIR SINE MIR -5 257 192 1723 160 10 46 chr20 33849722 33850028 -38303854 - AluJo SINE Alu -17 295 1 293 210 58 94 chr20 33850028 33850101 -38303781 - MIR SINE MIR -70 192 125 513 275 14 14 chr20 33850173 33850311 -38303571 - MIR SINE MIR -105 157 20 2094 139 3 7 chr20 33850873 33851183 -38302699 - AluSx SINE Alu -3 309 1 974 106 0 0 chr20 33851185 33851317 -38302565 - AluJb SINE Alu -180 132 1 241 260 62 21 chr20 33851872 33851968 -38301914 + L1ME4a LINE L1 5776 5875 -246 4593 12 0 0 chr20 33852174 33852685 -38301197 - L1PA3 LINE L1 0 6155 5645 552 162 182 0 chr20 33852714 33852868 -38301014 - MER69 DNA AcHobo -1 2525 2344 235 105 0 26 chr20 33852919 33852957 -38300925 - MER69 DNA AcHobo -2489 37 1 204 40 0 0 chr20 33852987 33853012 -38300870 + (TTTA)n Simple_repeat Simple_repeat 1 25 0 2227 111 0 0 chr20 33853020 33853309 -38300573 - AluSx SINE Alu -23 289 1 358 234 65 19 chr20 33853310 33853417 -38300465 + L1ME4a LINE L1 5982 6093 -28 1628 139 88 0 chr20 33853492 33853787 -38300095 - L1MB3 LINE L1 -3 6180 5860 4030 179 44 26 chr20 33853791 33853898 -38299984 - L1 LINE L1 -1721 4425 4321 2355 100 0 3 chr20 33853898 33854199 -38299683 - AluSg SINE Alu -10 300 1 4030 179 44 26 chr20 33854199 33854983 -38298899 - L1 LINE L1 -1825 4321 3518 215 61 30 0 chr20 33855082 33855115 -38298767 + (TTTTC)n Simple_repeat Simple_repeat 2 35 0 279 114 0 0 chr20 33855119 33855163 -38298719 + (TCCCC)n Simple_repeat Simple_repeat 5 48 0 902 93 8 23 chr20 33855167 33855296 -38298586 - FLAM_C SINE Alu -6 137 11 467 281 0 16 chr20 33855769 33855890 -38297992 - L2 LINE L2 -5 3267 3149 465 232 116 64 chr20 33857077 33857141 -38296741 + L1ME3A LINE L1 5646 5705 -465 2370 92 0 3 chr20 33857141 33857434 -38296448 + AluSg SINE Alu 1 292 -18 465 232 116 64 chr20 33857434 33857619 -38296263 + L1ME3A LINE L1 5705 5908 -262 357 260 52 88 chr20 33857636 33857761 -38296121 + L1ME3A LINE L1 5986 6103 -67 2225 103 7 0 chr20 33857761 33858052 -38295830 + AluSx SINE Alu 1 293 -19 357 260 52 88 chr20 33858052 33858118 -38295764 + L1ME3A LINE L1 6103 6170 0 257 252 76 76 chr20 33858111 33858242 -38295640 - HAL1 LINE L1 -33 2474 2344 * 405 222 74 9 chr20 33858404 33858512 -38295370 - L1MC/D LINE L1 -2107 5701 5587 405 326 94 4 chr20 33858669 33858902 -38294980 - MIR SINE MIR -1 261 8 1596 127 40 63 chr20 33858996 33859343 -38294539 - L1MA7 LINE L1 0 6291 5953 2265 91 7 0 chr20 33859361 33859647 -38294235 + AluSx SINE Alu 1 288 -24 954 93 31 0 chr20 33859679 33859808 -38294074 - FLAM_C SINE Alu 0 133 1 4793 150 15 56 chr20 33859808 33860219 -38293663 - L1MA7 LINE L1 -327 5964 5538 2708 86 14 0 chr20 33860219 33860578 -38293304 + THE1B LTR MaLR 1 364 0 4793 150 15 56 chr20 33860578 33860853 -38293029 - L1MA7 LINE L1 -753 5538 5253 2300 109 3 0 chr20 33860853 33861164 -38292718 - AluSq SINE Alu -1 312 1 2175 107 21 0 chr20 33861174 33861465 -38292417 - AluSp SINE Alu -16 297 1 4793 150 15 56 chr20 33861465 33861685 -38292197 - L1MA7 LINE L1 -1047 5244 5017 2213 134 0 3 chr20 33861685 33861998 -38291884 - AluSx SINE Alu 0 312 1 4793 150 15 56 chr20 33861998 33862715 -38291167 - L1MA7 LINE L1 -1274 5017 4398 208 138 0 77 chr20 33862733 33862798 -38291084 + (TTTTA)n Simple_repeat Simple_repeat 1 60 0 1071 75 8 0 chr20 33862803 33862936 -38290946 - AluSp SINE Alu -171 142 9 4424 209 73 16 chr20 33863100 33863283 -38290599 + L1MB8 LINE L1 3392 3563 -2583 2350 107 0 0 chr20 33863283 33863581 -38290301 - AluSg SINE Alu -12 298 1 4424 209 73 16 chr20 33863581 33864560 -38289322 + L1MB8 LINE L1 3563 4620 -1526 1049 92 5 32 chr20 33864588 33864710 -38289172 + (TTTC)n Simple_repeat Simple_repeat 1 298 0 1049 92 5 32 chr20 33864710 33864895 -38288987 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 2204 115 7 7 chr20 33864942 33865246 -38288636 - AluSg SINE Alu -5 305 2 734 174 0 22 chr20 33865267 33865360 -38288522 + CT-rich Low_complexity Low_complexity 1 90 -90 2256 105 7 0 chr20 33865360 33865656 -38288226 - AluSx SINE Alu -11 301 4 734 174 0 22 chr20 33865656 33865746 -38288136 + CT-rich Low_complexity Low_complexity 90 180 0 4529 174 46 20 chr20 33865754 33866636 -38287246 + L1MB8 LINE L1 4654 5591 -587 2288 91 7 23 chr20 33866636 33866945 -38286937 + AluSq SINE Alu 1 304 -9 4529 174 46 20 chr20 33866945 33867542 -38286340 + L1MB8 LINE L1 5591 6171 -7 227 260 0 0 chr20 33867674 33867724 -38286158 - L1ME LINE L1 -518 5603 5554 359 192 75 9 chr20 33867871 33868059 -38285823 - L1P5 LINE L1 -671 5480 5279 879 148 0 0 chr20 33868069 33868197 -38285685 + FLAM_C SINE Alu 1 128 -5 450 290 66 16 chr20 33868825 33869008 -38284874 + MIR SINE MIR 30 221 -41 197 239 46 46 chr20 33869089 33869198 -38284684 - MIR SINE MIR -67 141 33 209 269 0 0 chr20 33869612 33869664 -38284218 + (TCCA)n Simple_repeat Simple_repeat 1 52 0 326 289 2 21 chr20 33869740 33869852 -38284030 - L1ME3A LINE L1 -4 6158 6048 294 100 0 0 chr20 33869857 33869897 -38283985 + Alu SINE Alu 1 40 -262 1505 116 0 0 chr20 33869955 33870154 -38283728 + AluSg/x SINE Alu 107 305 -5 1072 253 21 3 chr20 33870159 33870444 -38283438 - L1M1 LINE L1 -4444 1526 1237 2088 232 87 39 chr20 33870485 33870811 -38283071 - L1M1 LINE L1 -4516 1375 1066 1818 156 14 3 chr20 33870811 33871120 -38282762 - AluJb SINE Alu 0 312 1 2088 232 87 39 chr20 33871120 33871460 -38282422 - L1M1 LINE L1 -4825 1066 676 777 304 67 40 chr20 33871605 33872219 -38281663 - L1M1 LINE L1 -5390 501 1 321 268 65 26 chr20 33872291 33872312 -38281570 - L1MA10 LINE L1 0 6334 6314 2380 216 104 8 chr20 33872312 33872965 -38280917 - L1ME1 LINE L1 -10 6156 5420 * 8814 212 104 35 chr20 33872920 33873464 -38280418 + L1ME1 LINE L1 2522 3027 -3139 699 109 134 25 chr20 33873464 33873583 -38280299 + FLAM_C SINE Alu 1 132 -1 8814 212 104 35 chr20 33873583 33874178 -38279704 + L1ME1 LINE L1 3027 3580 -2586 577 35 0 35 chr20 33874178 33874264 -38279618 + (GAAA)n Simple_repeat Simple_repeat 3 85 0 8814 212 104 35 chr20 33874264 33875381 -38278501 + L1ME1 LINE L1 3580 4619 -1547 2008 135 0 3 chr20 33875381 33875704 -38278178 + AluSx SINE Alu 1 322 0 8814 212 104 35 chr20 33875704 33876069 -38277813 + L1ME1 LINE L1 4619 4958 -1208 4041 93 57 0 chr20 33876069 33876618 -38277264 - LTR19B LTR ERV1 0 580 1 8814 212 104 35 chr20 33876618 33877285 -38276597 + L1ME1 LINE L1 4958 6048 -118 278 206 0 0 chr20 33877282 33877345 -38276537 + L1MA10 LINE L1 6269 6331 -3 * 1581 206 127 10 chr20 33877345 33877642 -38276240 - L1ME LINE L1 -699 5467 5206 2018 144 0 16 chr20 33877642 33877947 -38275935 + AluJb SINE Alu 1 300 -12 1581 206 127 10 chr20 33877947 33878207 -38275675 - L1ME LINE L1 -960 5206 4850 841 257 16 12 chr20 33878209 33878458 -38275424 - L1ME1 LINE L1 -768 5378 5129 5151 159 29 29 chr20 33878481 33879470 -38274412 - L1MB2 LINE L1 -7 6164 5176 2002 141 17 0 chr20 33879470 33879769 -38274113 - AluSq SINE Alu -8 305 2 5151 159 29 29 chr20 33879769 33880219 -38273663 - L1MB2 LINE L1 -995 5176 4727 1066 189 21 29 chr20 33880360 33880603 -38273279 - L1MB2 LINE L1 -2156 3990 3750 1769 177 0 0 chr20 33880923 33881206 -38272676 + AluJo SINE Alu 2 313 0 192 35 0 35 chr20 33881206 33881235 -38272647 + (TAAAA)n Simple_repeat Simple_repeat 2 165 0 1879 268 123 49 chr20 33881511 33882953 -38270929 - L1MEc LINE L1 -4012 2384 836 24 32 0 0 chr20 33882964 33882995 -38270887 + AT_rich Low_complexity Low_complexity 1 31 0 546 304 38 59 chr20 33884742 33885031 -38268851 - L2 LINE L2 -5 3267 2985 2201 105 0 0 chr20 33888207 33888501 -38265381 - AluSx SINE Alu -18 294 1 460 164 92 29 chr20 33888682 33888806 -38265076 - MLT1C LTR MaLR 0 467 353 863 188 47 60 chr20 33889188 33889422 -38264460 - MLT1C LTR MaLR -23 444 214 298 111 0 48 chr20 33889453 33889516 -38264366 + (TTTTC)n Simple_repeat Simple_repeat 5 64 0 694 101 0 64 chr20 33889517 33889705 -38264177 + (TTCTCC)n Simple_repeat Simple_repeat 3 178 0 1630 167 0 50 chr20 33889717 33889910 -38263972 - AluJo SINE Alu -10 302 130 2175 129 0 0 chr20 33889910 33890219 -38263663 + AluSx SINE Alu 1 309 -3 1630 167 0 50 chr20 33890219 33890343 -38263539 - AluJo SINE Alu -182 130 1 1036 156 17 0 chr20 33890350 33890523 -38263359 - MLT1C LTR MaLR -291 176 1 2139 109 13 0 chr20 33890578 33890882 -38263000 - AluSx SINE Alu -4 308 1 548 296 87 0 chr20 33891207 33891403 -38262479 - MIR SINE MIR -9 253 41 444 246 131 24 chr20 33891887 33892095 -38261787 - MIR SINE MIR -36 226 4 398 243 132 7 chr20 33893485 33893621 -38260261 - L1ME4a LINE L1 -2 6119 5967 2167 96 0 3 chr20 33894032 33894323 -38259559 - AluSx SINE Alu -22 290 1 358 265 0 0 chr20 33894467 33894565 -38259317 + (CA)n Simple_repeat Simple_repeat 1 98 0 197 218 150 120 chr20 33895258 33895391 -38258491 + L2 LINE L2 2928 3064 -249 224 81 27 0 chr20 33895930 33895967 -38257915 - MIR SINE MIR -118 144 107 224 320 19 19 chr20 33896157 33896260 -38257622 - MIR SINE MIR -70 138 36 305 262 213 0 chr20 33896454 33896576 -38257306 + MIR SINE MIR 20 167 -95 2542 114 50 0 chr20 33896922 33897280 -38256602 + MER51B LTR ERV1 1 376 -1 247 258 25 50 chr20 33897286 33897445 -38256437 + (TCTCTG)n Simple_repeat Simple_repeat 2 156 0 409 245 63 25 chr20 33897845 33898004 -38255878 - LTR43 LTR ERV1 -306 296 132 543 229 9 0 chr20 33898182 33898287 -38255595 - MER81 DNA DNA -3 111 6 483 258 184 0 chr20 33899072 33899235 -38254647 + MIR SINE MIR 5 197 -65 210 296 0 0 chr20 33899320 33899374 -38254508 - MIR SINE MIR -140 122 69 944 229 12 41 chr20 33899411 33899655 -38254227 - MIR SINE MIR 0 262 26 292 311 47 9 chr20 33900135 33900241 -38253641 - MIR SINE MIR -70 192 83 2640 88 133 5 chr20 33900305 33900702 -38253180 + LTR7 LTR ERV1 1 448 -2 4720 38 2 5 chr20 33900774 33901332 -38252550 + LTR6B LTR ERV1 1 556 -2 251 309 12 0 chr20 33901442 33901526 -38252356 + MIR SINE MIR 43 127 -81 479 297 0 36 chr20 33901649 33901787 -38252095 + MIR SINE MIR 21 153 -109 2665 118 31 14 chr20 33902319 33902741 -38251141 - LTR3 LTR ERVK -3 429 1 243 227 23 45 chr20 33903081 33903169 -38250713 - MIR SINE MIR -134 128 43 2011 129 3 3 chr20 33904102 33904404 -38249478 + AluSx SINE Alu 1 302 -10 1822 166 0 3 chr20 33904587 33904877 -38249005 - AluSx SINE Alu -17 295 7 228 135 0 0 chr20 33905028 33905065 -38248817 - MIR SINE MIR -63 145 109 241 299 0 0 chr20 33905377 33905444 -38248438 - L2 LINE L2 -1 3312 3246 284 197 16 0 chr20 33906680 33906741 -38247141 + MIR SINE MIR 76 137 -125 329 333 135 19 chr20 33906936 33907515 -38246367 + L1M4 LINE L1 4357 5002 -1144 1571 106 0 5 chr20 33907620 33907838 -38246044 + AluSg/x SINE Alu 83 299 -13 199 267 0 0 chr20 33908739 33908784 -38245098 - L2 LINE L2 -18 3254 3210 247 242 0 30 chr20 33908934 33909000 -38244882 - MIR SINE MIR -69 139 76 235 297 24 36 chr20 33909072 33909189 -38244693 - MIR3 SINE MIR -51 157 41 331 280 28 9 chr20 33909202 33909309 -38244573 + MIR SINE MIR 37 145 -117 302 246 0 0 chr20 33909697 33909766 -38244116 - MIR SINE MIR -63 145 77 318 217 50 71 chr20 33909833 33909971 -38243911 + MIR SINE MIR 65 192 -70 239 272 56 46 chr20 33910184 33910303 -38243579 - MIR SINE MIR -71 137 16 218 273 23 8 chr20 33910589 33910689 -38243193 + MIR SINE MIR 87 187 -75 205 312 52 0 chr20 33910927 33910981 -38242901 - L3 LINE CR1 -117 1460 1403 302 232 56 40 chr20 33910981 33911106 -38242776 + MIR3 SINE MIR 2 128 -80 269 260 27 0 chr20 33911661 33911734 -38242148 + L2 LINE L2 2989 3063 -209 354 98 0 0 chr20 33911820 33911871 -38242011 + (TTCA)n Simple_repeat Simple_repeat 4 54 0 409 309 103 12 chr20 33911895 33912060 -38241822 - MIR SINE MIR -81 181 2 264 180 33 0 chr20 33912762 33912823 -38241059 + MIR SINE MIR 77 139 -69 407 248 8 72 chr20 33912827 33912952 -38240930 + MIR SINE MIR 28 144 -118 378 315 9 41 chr20 33913062 33913327 -38240555 + C-rich Low_complexity Low_complexity 1 256 0 755 148 0 0 chr20 33913613 33913735 -38240147 - AluSc SINE Alu -2 307 186 268 313 40 0 chr20 33913756 33913855 -38240027 + MIR SINE MIR 140 242 -20 243 252 97 39 chr20 33913887 33913990 -38239892 - MIR SINE MIR -63 145 37 2112 103 0 0 chr20 33914241 33914553 -38239329 - AluSx SINE Alu 0 312 1 2377 74 0 0 chr20 33914580 33914889 -38238993 - AluY SINE Alu -2 309 1 199 47 0 93 chr20 33915077 33915120 -38238762 + (CACCC)n Simple_repeat Simple_repeat 4 42 0 415 214 34 0 chr20 33915648 33915737 -38238145 + MIR SINE MIR 74 165 -97 746 250 112 5 chr20 33915746 33915970 -38237912 - MIR SINE MIR -13 249 2 2021 191 162 12 chr20 33916051 33916594 -38237288 + MLT1G LTR MaLR 2 590 0 295 276 61 10 chr20 33916607 33916705 -38237177 - MIR SINE MIR -94 168 66 775 261 149 0 chr20 33916990 33917212 -38236670 - MIR SINE MIR -6 256 2 457 271 32 52 chr20 33917458 33917593 -38236289 + HAL1 LINE L1 2 135 -2372 392 303 56 67 chr20 33917593 33917788 -38236094 + MER91A DNA MER1_type 4 196 0 457 271 32 52 chr20 33917788 33917807 -38236075 + HAL1 LINE L1 135 153 -2354 958 171 25 0 chr20 33917807 33917965 -38235917 - MER20 DNA MER1_type -57 162 1 521 204 163 41 chr20 33918003 33918199 -38235683 + HAL1 LINE L1 265 484 -2023 1122 251 107 7 chr20 33918199 33918760 -38235122 + L1ME LINE L1 5072 5696 -474 333 297 34 34 chr20 33918752 33918927 -38234955 + HAL1 LINE L1 1189 1363 -1144 * 729 258 26 37 chr20 33919363 33919553 -38234329 - MER5A DNA MER1_type 0 189 2 1110 284 44 54 chr20 33919974 33920281 -38233601 + L1MCc LINE L1 1284 1593 -1709 1469 158 124 0 chr20 33920281 33920546 -38233336 + AluSx SINE Alu 1 298 -14 1110 284 44 54 chr20 33920546 33921249 -38232633 + L1MCc LINE L1 1593 2581 -721 635 343 46 8 chr20 33921684 33921923 -38231959 - MIR SINE MIR -6 256 9 314 365 6 11 chr20 33922115 33922293 -38231589 + (TCCA)n Simple_repeat Simple_repeat 1 177 0 245 274 0 9 chr20 33922342 33922455 -38231427 + (TCCA)n Simple_repeat Simple_repeat 4 115 0 227 221 15 15 chr20 33922493 33922561 -38231321 + (TCCA)n Simple_repeat Simple_repeat 3 70 0 325 341 230 0 chr20 33922565 33922782 -38231100 - L2 LINE L2 -3 3269 3003 674 268 33 11 chr20 33923394 33923577 -38230305 + MIR SINE MIR 16 202 -60 1660 120 30 63 chr20 33923721 33924022 -38229860 + AluJb SINE Alu 1 291 -21 819 95 32 32 chr20 33924031 33924157 -38229725 + AluSg/x SINE Alu 182 307 -5 1750 238 27 31 chr20 33924158 33924401 -38229481 + L1 LINE L1 3918 4160 -1986 1582 166 12 63 chr20 33924401 33924720 -38229162 + AluJo SINE Alu 1 303 -9 1750 238 27 31 chr20 33924720 33924955 -38228927 + L1 LINE L1 4160 4394 -1752 2186 93 3 0 chr20 33924977 33925267 -38228615 + AluSg1 SINE Alu 1 291 -18 239 271 47 24 chr20 33925616 33925701 -38228181 - MIR SINE MIR -118 144 58 240 182 117 13 chr20 33925899 33925976 -38227906 + L2 LINE L2 2965 3049 -223 196 182 23 0 chr20 33926189 33926233 -38227649 - L2 LINE L2 -290 2982 2938 2012 127 27 0 chr20 33926235 33926527 -38227355 + AluJb SINE Alu 1 300 -12 813 45 30 15 chr20 33927172 33927305 -38226577 + (TTTC)n Simple_repeat Simple_repeat 2 136 0 234 0 0 0 chr20 33927306 33927332 -38226550 + (TCCC)n Simple_repeat Simple_repeat 1 26 0 1932 116 60 0 chr20 33927332 33927616 -38226266 - AluSg SINE Alu -9 301 1 269 364 0 7 chr20 33927838 33927981 -38225901 + (TGGA)n Simple_repeat Simple_repeat 3 144 0 196 227 186 10 chr20 33928654 33928751 -38225131 - MIR SINE MIR -65 143 30 583 300 128 36 chr20 33928877 33929267 -38224615 + MLT1L LTR MaLR 138 563 -52 21 0 0 0 chr20 33929316 33929337 -38224545 + AT_rich Low_complexity Low_complexity 1 21 0 430 350 0 0 chr20 33929611 33929748 -38224134 + L2 LINE L2 3133 3269 -3 234 358 9 28 chr20 33929751 33929860 -38224022 + MIR SINE MIR 64 170 -92 188 333 17 42 chr20 33930217 33930337 -38223545 - MIR3 SINE MIR -42 166 50 1708 145 7 14 chr20 33930514 33930804 -38223078 + AluSx SINE Alu 5 292 -20 2039 205 48 36 chr20 33930975 33931472 -38222410 + MLT1D LTR MaLR 3 505 0 259 239 250 0 chr20 33931559 33931647 -38222235 - L2 LINE L2 0 3272 3163 181 418 0 0 chr20 33931646 33931713 -38222169 + MIR SINE MIR 196 262 0 * 220 320 20 26 chr20 33932277 33932430 -38221452 + (CA)n Simple_repeat Simple_repeat 1 152 0 318 307 99 0 chr20 33934433 33934534 -38219348 + L2 LINE L2 3200 3310 -3 293 315 93 25 chr20 33935638 33935800 -38218082 - MIR3 SINE MIR -15 193 21 203 188 16 62 chr20 33935981 33936045 -38217837 + MIR SINE MIR 202 262 0 358 248 137 72 chr20 33936086 33936239 -38217643 - MIR SINE MIR -72 190 28 263 286 116 0 chr20 33937249 33937361 -38216521 - Charlie8 DNA MER1_type -2230 187 63 2138 110 0 0 chr20 33937363 33937684 -38216198 + AluSq SINE Alu 3 323 0 367 349 101 18 chr20 33938206 33938375 -38215507 - L3 LINE CR1 -28 1549 1367 280 222 152 20 chr20 33938752 33938851 -38215031 + MIR SINE MIR 64 175 -33 639 281 14 29 chr20 33939056 33939266 -38214616 - MIR SINE MIR -7 255 49 364 253 0 20 chr20 33939736 33939835 -38214047 - MIR SINE MIR -107 155 59 764 282 25 5 chr20 33940061 33940263 -38213619 - MIR SINE MIR -20 242 37 295 308 84 28 chr20 33941553 33941696 -38212186 + MIR SINE MIR 112 262 0 225 208 21 0 chr20 33941890 33941938 -38211944 - MIR SINE MIR -56 152 104 365 121 0 0 chr20 33943120 33943178 -38210704 - AluJ/FLAM SINE Alu -244 58 1 227 325 115 40 chr20 33943343 33943543 -38210339 + MIR SINE MIR 1 215 -47 260 305 144 0 chr20 33944942 33945060 -38208822 + L2 LINE L2 2907 3041 -231 868 335 84 20 chr20 33945459 33945910 -38207972 + L2 LINE L2 2834 3313 0 207 262 16 0 chr20 33946835 33946896 -38206986 + (TCTG)n Simple_repeat Simple_repeat 3 64 0 451 298 13 26 chr20 33947194 33947345 -38206537 + MIR SINE MIR 71 219 -43 692 147 57 62 chr20 33948254 33948431 -38205451 + MER3 DNA MER1_type 1 129 -80 557 276 0 0 chr20 33948488 33948611 -38205271 + L2 LINE L2 3150 3272 0 462 315 31 6 chr20 33948777 33948939 -38204943 - MIR SINE MIR -51 211 46 324 281 11 11 chr20 33949205 33949294 -38204588 + C-rich Low_complexity Low_complexity 3 91 0 285 320 108 54 chr20 33949758 33950055 -38203827 - L3 LINE CR1 -4 1573 1261 742 185 13 9 chr20 33950682 33950997 -38202885 + (TCCA)n Simple_repeat Simple_repeat 1 316 0 701 171 23 0 chr20 33951025 33951200 -38202682 + (TCCA)n Simple_repeat Simple_repeat 1 179 0 744 172 17 0 chr20 33951245 33951419 -38202463 + (TCCA)n Simple_repeat Simple_repeat 2 178 0 371 270 42 20 chr20 33951668 33951889 -38201993 - LTR41 LTR ERVL -6 767 510 495 223 86 29 chr20 33952304 33952479 -38201403 - LTR41 LTR ERVL -588 185 1 940 300 4 12 chr20 33953222 33953472 -38200410 + MIR SINE MIR 3 250 -12 389 280 0 53 chr20 33953495 33953627 -38200255 - MIR3 SINE MIR -47 161 37 455 289 149 38 chr20 33954399 33954742 -38199140 + L2 LINE L2 2933 3313 0 703 245 19 0 chr20 33955123 33955278 -38198604 - MIR3 SINE MIR -37 171 14 230 257 14 40 chr20 33955901 33955975 -38197907 + MIR3 SINE MIR 115 186 -22 265 313 64 18 chr20 33956181 33956383 -38197499 + L2 LINE L2 2994 3296 -17 255 61 0 0 chr20 33956388 33956421 -38197461 + (TGAA)n Simple_repeat Simple_repeat 2 34 0 345 302 8 31 chr20 33957511 33957640 -38196242 - MIR SINE MIR -81 181 56 403 228 65 0 chr20 33957707 33957799 -38196083 + MIR SINE MIR 42 139 -123 344 314 122 45 chr20 33958240 33958527 -38195355 + L2 LINE L2 2862 3170 -102 296 354 7 7 chr20 33958853 33958997 -38194885 + MIR SINE MIR 49 192 -70 459 331 0 0 chr20 33959149 33959297 -38194585 + MER117 DNA MER1_type 40 187 -10 1216 182 9 23 chr20 33959318 33959538 -38194344 + MER20 DNA MER1_type 3 219 0 318 214 48 12 chr20 33959538 33959622 -38194260 - MIR3 SINE MIR -48 160 74 233 374 197 4 chr20 33960004 33960258 -38193624 - L2 LINE L2 -2 3270 2968 576 263 113 0 chr20 33960860 33961020 -38192862 + MER117 DNA MER1_type 1 178 -19 282 208 130 0 chr20 33961094 33961171 -38192711 + MIR SINE MIR 39 125 -83 265 292 0 0 chr20 33961766 33961831 -38192051 + MIR SINE MIR 78 142 -66 255 342 0 0 chr20 33961942 33962029 -38191853 - MIR SINE MIR -61 147 68 264 317 25 8 chr20 33962463 33962583 -38191299 - MIR SINE MIR -92 170 49 235 300 83 42 chr20 33962668 33962788 -38191094 - MIR SINE MIR -114 148 24 182 302 115 0 chr20 33963022 33963118 -38190764 + MIR3 SINE MIR 101 207 -1 213 360 29 0 chr20 33963558 33963730 -38190152 + (TCCA)n Simple_repeat Simple_repeat 3 179 0 334 274 12 0 chr20 33963900 33964068 -38189814 + (TCCA)n Simple_repeat Simple_repeat 3 172 0 228 278 13 7 chr20 33964120 33964271 -38189611 + (TCCA)n Simple_repeat Simple_repeat 3 154 0 432 234 12 136 chr20 33965447 33965672 -38188210 - L2 LINE L2 -174 3098 2900 268 136 0 0 chr20 33966310 33966354 -38187528 + L2 LINE L2 3008 3051 -221 281 303 46 37 chr20 33966360 33966469 -38187413 - MIR SINE MIR 0 262 153 774 224 4 80 chr20 33966542 33966647 -38187235 - MLT1K LTR MaLR -3 585 506 2510 65 0 0 chr20 33966647 33966953 -38186929 - AluY SINE Alu -5 306 1 774 224 4 80 chr20 33966953 33967084 -38186798 - MLT1K LTR MaLR -82 506 367 311 345 43 0 chr20 33967404 33967543 -38186339 + L3 LINE CR1 1382 1526 -51 281 256 0 26 chr20 33967813 33967891 -38185991 + MIR SINE MIR 73 148 -114 184 339 16 0 chr20 33967961 33968023 -38185859 + L2 LINE L2 3182 3244 -28 350 299 49 35 chr20 33968065 33968209 -38185673 - MIR SINE MIR -68 194 49 258 220 33 33 chr20 33968788 33968879 -38185003 - MER117 DNA MER1_type -2 195 105 471 284 102 23 chr20 33969215 33969391 -38184491 + MIR SINE MIR 63 252 -10 348 287 25 11 chr20 33969398 33969554 -38184328 - MIR SINE MIR -27 235 76 754 260 39 6 chr20 33970038 33970219 -38183663 - MIR SINE MIR -12 250 64 454 298 58 23 chr20 33970282 33970453 -38183429 - MIR SINE MIR -43 219 43 * 986 216 4 76 chr20 33970424 33970583 -38183299 + MIR SINE MIR 11 140 -122 5921 146 35 36 chr20 33970583 33971656 -38182226 + MER11C LTR ERVK 1 1071 0 986 216 4 76 chr20 33971656 33971767 -38182115 + MIR SINE MIR 140 257 -5 431 241 0 9 chr20 33972205 33972317 -38181565 - LTR37A LTR ERV1 -77 349 239 354 268 15 52 chr20 33972615 33972784 -38181098 - L1MC4 LINE L1 -1320 7002 1914 302 341 61 37 chr20 33972728 33972892 -38180990 + L1MCa LINE L1 1896 2063 -4363 * 329 307 51 44 chr20 33972810 33972947 -38180935 - L1MC4 LINE L1 -1334 6708 6571 2119 89 31 3 chr20 33974006 33974299 -38179583 + AluSc SINE Alu 1 301 -8 360 0 0 0 chr20 33974407 33974447 -38179435 + (TG)n Simple_repeat Simple_repeat 2 41 0 409 278 56 35 chr20 33974942 33975086 -38178796 + MIR3 SINE MIR 23 169 -39 395 254 56 16 chr20 33975249 33975375 -38178507 - MIR3 SINE MIR -72 136 6 424 224 103 58 chr20 33975696 33975852 -38178030 - MIR SINE MIR -79 183 21 207 327 109 10 chr20 33975949 33976050 -38177832 + MER5B DNA MER1_type 18 128 -50 499 287 79 12 chr20 33976285 33976449 -38177433 + MIR SINE MIR 81 255 -7 658 241 81 66 chr20 33976588 33976681 -38177201 + L1ME2 LINE L1 5598 5688 -482 2128 112 0 0 chr20 33976681 33976968 -38176914 + AluSx SINE Alu 9 295 -17 658 241 81 66 chr20 33976968 33977273 -38176609 + L1ME2 LINE L1 5688 6028 -142 318 215 0 25 chr20 33977285 33977364 -38176518 + L1ME3A LINE L1 6089 6165 -5 284 277 160 27 chr20 33977528 33977716 -38176166 - L2 LINE L2 -82 3190 2978 614 250 118 26 chr20 33977749 33978021 -38175861 + L2 LINE L2 2834 3130 -183 1158 145 0 0 chr20 33978036 33978202 -38175680 - AluSg/x SINE Alu -22 290 125 342 0 0 0 chr20 33978213 33978251 -38175631 + (TA)n Simple_repeat Simple_repeat 1 38 0 2045 103 31 0 chr20 33978252 33978543 -38175339 - AluY SINE Alu -11 300 1 1063 188 74 11 chr20 33978583 33978854 -38175028 + MER33 DNA MER1_type 1 288 -36 333 244 139 35 chr20 33978860 33978975 -38174907 + L2 LINE L2 3187 3313 0 640 303 127 21 chr20 33979992 33980332 -38173550 - L2 LINE L2 -86 3227 2852 296 330 29 10 chr20 33980744 33980847 -38173035 + MIR SINE MIR 39 143 -65 447 279 18 14 chr20 33981824 33981965 -38171917 + MIR SINE MIR 25 167 -56 238 213 0 0 chr20 33981961 33982008 -38171874 - L2 LINE L2 -2 3270 3224 * 252 185 0 141 chr20 33982534 33982626 -38171256 + MIR SINE MIR 40 119 -89 210 274 0 0 chr20 33982630 33982681 -38171201 + L2 LINE L2 2975 3025 -288 376 306 75 8 chr20 33982715 33982849 -38171033 + L2 LINE L2 3150 3292 -21 2131 94 3 0 chr20 33982851 33983139 -38170743 - AluSq SINE Alu -10 303 15 696 126 5 0 chr20 33983140 33983472 -38170410 + CER Satellite Satellite 1 333 -33 473 252 91 0 chr20 33983554 33983728 -38170154 - MIR SINE MIR -6 256 60 493 263 18 0 chr20 33984001 33984115 -38169767 - MIR SINE MIR -96 166 51 366 279 36 0 chr20 33984135 33984246 -38169636 + MIR SINE MIR 148 262 0 329 282 49 58 chr20 33984412 33984723 -38169159 - L2 LINE L2 -165 3107 2803 561 217 115 0 chr20 33984777 33984934 -38168948 - MIR SINE MIR -11 251 77 343 233 17 67 chr20 33986034 33986154 -38167728 + MIR3 SINE MIR 58 171 -37 2164 108 16 0 chr20 33986222 33986529 -38167353 - AluSx SINE Alu 0 312 1 324 0 0 0 chr20 33987002 33987038 -38166844 + (TTCA)n Simple_repeat Simple_repeat 4 39 0 392 309 89 28 chr20 33988275 33988566 -38165316 + MER102b DNA MER1_type 31 339 -2 311 214 111 51 chr20 33988609 33988726 -38165156 + MIR3 SINE MIR 85 208 0 227 316 0 25 chr20 33989574 33989653 -38164229 - L2 LINE L2 -13 3259 3183 191 313 60 0 chr20 33989623 33989706 -38164176 - MIR SINE MIR -97 165 78 * 443 254 106 7 chr20 33989858 33990000 -38163882 + MIR SINE MIR 2 157 -105 200 289 0 0 chr20 33990008 33990053 -38163829 + L2 LINE L2 3210 3254 -18 606 362 0 0 chr20 33990637 33990825 -38163057 - MER117 DNA MER1_type -9 188 1 1576 166 97 0 chr20 33990925 33991203 -38162679 + AluJb SINE Alu 6 310 -2 419 178 22 0 chr20 33991203 33991293 -38162589 + GA-rich Low_complexity Low_complexity 1 92 0 599 284 108 20 chr20 33991868 33992118 -38161764 - Charlie8 DNA MER1_type -2145 272 1 772 302 79 0 chr20 33992129 33992344 -38161538 + MIR SINE MIR 29 260 -2 280 250 60 12 chr20 33992567 33992651 -38161231 - MER117 DNA MER1_type -72 125 38 842 228 73 69 chr20 33993708 33994265 -38159617 - L2 LINE L2 0 3313 2749 365 338 7 7 chr20 33994280 33994419 -38159463 + L2 LINE L2 3132 3270 -2 214 338 0 0 chr20 33995412 33995480 -38158402 + L2 LINE L2 3246 3313 0 209 306 144 59 chr20 33997980 33998251 -38155631 - L2 LINE L2 0 3272 2979 547 248 0 0 chr20 33998612 33998717 -38155165 - MER117 DNA MER1_type -1 196 92 298 313 87 26 chr20 33998784 33998899 -38154983 - MER117 DNA MER1_type -9 188 67 310 321 24 41 chr20 33998916 33999061 -38154821 - MIR SINE MIR -63 145 36 230 246 49 0 chr20 33999101 33999162 -38154720 - L2 LINE L2 -2 3270 3207 285 261 7 43 chr20 33999669 33999807 -38154075 + (TCTCTG)n Simple_repeat Simple_repeat 1 133 0 229 224 0 0 chr20 33999819 33999868 -38154014 - L2 LINE L2 -239 3033 2985 262 270 87 17 chr20 34000002 34000117 -38153765 - MIR SINE MIR -70 138 16 183 80 0 0 chr20 34000287 34000312 -38153570 + (CAGC)n Simple_repeat Simple_repeat 1 25 0 978 157 0 0 chr20 34000314 34000623 -38153259 + (TCCA)n Simple_repeat Simple_repeat 1 309 0 213 224 0 0 chr20 34000625 34000683 -38153199 + CT-rich Low_complexity Low_complexity 1 58 0 210 182 23 0 chr20 34000701 34000745 -38153137 - L2 LINE L2 -1 3271 3227 435 306 30 0 chr20 34000814 34000948 -38152934 + MIR SINE MIR 10 147 -115 477 269 30 0 chr20 34001320 34001454 -38152428 + MIR SINE MIR 110 247 -15 229 195 23 69 chr20 34001461 34001548 -38152334 + L2 LINE L2 2928 3010 -262 212 247 165 0 chr20 34001598 34001683 -38152199 + L2 LINE L2 3105 3203 -69 587 293 95 35 chr20 34001721 34001953 -38151929 - MIR SINE MIR -10 252 7 808 262 4 26 chr20 34001967 34002197 -38151685 - MIR SINE MIR -12 250 27 258 274 46 97 chr20 34002733 34002969 -38150913 - MIR SINE MIR -4 258 22 200 330 101 0 chr20 34003012 34003121 -38150761 - MIR SINE MIR -45 217 98 199 214 114 0 chr20 34003398 34003468 -38150414 - MIR SINE MIR -168 94 17 221 228 35 0 chr20 34004042 34004099 -38149783 - L2 LINE L2 -333 2980 2922 641 212 28 1 chr20 34004227 34004393 -38149489 + L1ME2 LINE L1 5990 6165 -1 336 260 108 64 chr20 34004403 34004607 -38149275 + L1MC4 LINE L1 7829 8041 -1 492 275 44 12 chr20 34004788 34004948 -38148934 - MIR SINE MIR -70 192 28 426 210 0 0 chr20 34006360 34006479 -38147403 + (TGGA)n Simple_repeat Simple_repeat 1 119 0 348 212 23 0 chr20 34006517 34006649 -38147233 + (TGGA)n Simple_repeat Simple_repeat 3 137 0 327 352 21 7 chr20 34006673 34006815 -38147067 + (TGGA)n Simple_repeat Simple_repeat 3 146 0 251 245 0 0 chr20 34007446 34007499 -38146383 - L2 LINE L2 -5 3267 3215 688 267 114 8 chr20 34007524 34007760 -38146122 + MIR SINE MIR 2 262 0 2163 75 7 0 chr20 34007988 34008296 -38145586 - AluSq SINE Alu 0 310 1 264 352 0 0 chr20 34008433 34008521 -38145361 - MIR3 SINE MIR -15 193 106 312 231 16 48 chr20 34008711 34008972 -38144910 + (TGG)n Simple_repeat Simple_repeat 1 252 0 362 259 19 19 chr20 34009723 34009831 -38144051 + MIR SINE MIR 47 154 -108 624 307 9 89 chr20 34009918 34010234 -38143648 - L2 LINE L2 -5 3267 2977 286 279 99 0 chr20 34010302 34010413 -38143469 + L1ME4a LINE L1 5960 6081 -40 511 297 31 73 chr20 34010802 34010837 -38143045 + MIR SINE MIR 1 36 -226 2329 86 0 0 chr20 34010837 34011140 -38142742 + AluSq SINE Alu 1 303 -10 511 297 31 73 chr20 34011140 34011363 -38142519 + MIR SINE MIR 36 248 -14 367 295 148 16 chr20 34012140 34012323 -38141559 + MIR SINE MIR 45 251 -11 879 311 59 14 chr20 34012906 34013327 -38140555 - L1MC4a LINE L1 -1737 6071 5632 372 119 0 0 chr20 34013382 34013441 -38140441 + (CA)n Simple_repeat Simple_repeat 2 60 0 1052 175 0 0 chr20 34013858 34014035 -38139847 + AluJb SINE Alu 136 312 0 208 211 0 0 chr20 34014050 34014088 -38139794 + MIR SINE MIR 106 143 -65 250 306 0 0 chr20 34014175 34014237 -38139645 - L2 LINE L2 -1 3271 3210 540 267 199 14 chr20 34014866 34015087 -38138795 + MIR SINE MIR 1 262 0 276 215 183 0 chr20 34015504 34015597 -38138285 + MIR SINE MIR 33 142 -66 501 258 38 0 chr20 34015722 34015854 -38138028 - MER91C DNA MER1_type 0 140 4 525 254 25 0 chr20 34016142 34016264 -38137618 - MIR SINE MIR -63 145 21 900 218 97 0 chr20 34016625 34016831 -38137051 - MIR SINE MIR 0 262 37 921 239 5 15 chr20 34016890 34017095 -38136787 + MER63A DNA MER1_type 1 203 -7 675 275 73 97 chr20 34017299 34017818 -38136064 - L2 LINE L2 0 3272 2770 392 188 54 9 chr20 34018741 34018853 -38135029 - L1MC4 LINE L1 0 8042 7926 785 207 2 0 chr20 34018866 34019360 -38134522 + (TCCA)n Simple_repeat Simple_repeat 1 495 0 223 225 0 0 chr20 34019360 34019400 -38134482 + (CCCA)n Simple_repeat Simple_repeat 1 40 0 776 176 6 0 chr20 34019409 34019574 -38134308 + (TCCA)n Simple_repeat Simple_repeat 4 169 0 248 51 0 26 chr20 34019580 34019619 -38134263 + (TCTG)n Simple_repeat Simple_repeat 3 40 0 294 237 52 44 chr20 34019619 34019754 -38134128 - L1MC4 LINE L1 -120 7922 7787 1053 241 100 38 chr20 34019768 34020109 -38133773 - MER113 DNA MER1_type? -138 383 22 2210 109 0 3 chr20 34020159 34020463 -38133419 - AluSx SINE Alu 0 312 10 609 278 28 33 chr20 34021021 34021233 -38132649 + MIR SINE MIR 20 230 -32 364 231 77 29 chr20 34021295 34021399 -38132483 + MIR SINE MIR 71 179 -83 2036 134 3 0 chr20 34021941 34022239 -38131643 - AluSx SINE Alu -13 299 1 223 179 299 0 chr20 34022308 34022375 -38131507 - MIR SINE MIR -68 140 54 369 239 34 68 chr20 34022787 34022961 -38130921 + MIR SINE MIR 36 199 -62 186 314 70 12 chr20 34023012 34023098 -38130784 - MIR SINE MIR -7 255 165 188 302 19 0 chr20 34023606 34023659 -38130223 + MIR SINE MIR 66 119 -89 * 397 241 146 36 chr20 34023653 34023790 -38130092 + MIR SINE MIR 48 199 -63 201 344 0 0 chr20 34023832 34023893 -38129989 + MIR SINE MIR 202 262 0 436 252 72 7 chr20 34023940 34024079 -38129803 - L2 LINE L2 -2 3311 3164 576 213 293 16 chr20 34024099 34024127 -38129755 + L2 LINE L2 2688 2707 -606 2138 123 0 0 chr20 34024127 34024428 -38129454 + AluSx SINE Alu 1 301 -11 576 213 293 16 chr20 34024428 34024649 -38129233 + L2 LINE L2 2707 3006 -307 238 149 0 0 chr20 34024650 34024697 -38129185 - Alu SINE Alu -1 298 252 244 298 0 0 chr20 34024708 34024765 -38129117 + L2 LINE L2 3254 3310 -3 355 318 9 28 chr20 34025174 34025385 -38128497 + L2 LINE L2 2828 3034 -238 1374 129 35 129 chr20 34026402 34026712 -38127170 + AluJo SINE Alu 5 285 -27 228 35 0 0 chr20 34026729 34026758 -38127124 + (GGA)n Simple_repeat Simple_repeat 2 30 0 394 355 27 32 chr20 34026772 34026958 -38126924 - MIR SINE MIR -31 231 47 592 277 42 0 chr20 34026981 34027147 -38126735 + MIR SINE MIR 15 187 -75 322 299 0 75 chr20 34027139 34027214 -38126668 - MIR SINE MIR 0 262 202 * 1978 128 27 0 chr20 34027214 34027510 -38126372 - AluJb SINE Alu -8 304 1 322 299 0 75 chr20 34027510 34027581 -38126301 - MIR SINE MIR -60 202 127 182 333 79 9 chr20 34027713 34027827 -38126055 - L2 LINE L2 -237 3035 2914 536 189 5 5 chr20 34028314 34028431 -38125451 - MIR SINE MIR -49 159 43 189 75 38 151 chr20 34028818 34028871 -38125011 - MIR SINE MIR -61 147 101 380 262 56 16 chr20 34029039 34029165 -38124717 + MIR3 SINE MIR 71 201 -7 303 243 17 6 chr20 34029471 34029548 -38124334 - MIR SINE MIR -110 98 32 496 246 72 7 chr20 34029649 34029787 -38124095 - MIR SINE MIR -70 192 46 349 312 28 18 chr20 34029813 34029922 -38123960 - MIR SINE MIR -50 212 103 397 308 101 0 chr20 34029949 34030118 -38123764 - MIR SINE MIR -48 214 29 191 200 100 17 chr20 34030231 34030291 -38123591 + MIR SINE MIR 88 152 -56 314 250 112 72 chr20 34030752 34030904 -38122978 - L1ME4a LINE L1 0 6121 5964 237 331 28 42 chr20 34031493 34031635 -38122247 + MIR3 SINE MIR 33 172 -36 310 235 134 42 chr20 34031676 34031795 -38122087 - MER103 DNA DNA -1 165 36 551 339 56 50 chr20 34031956 34032030 -38121852 - L2 LINE L2 0 3272 3200 1959 112 0 0 chr20 34032030 34032299 -38121583 - AluSx SINE Alu -5 307 39 551 339 56 50 chr20 34032299 34032584 -38121298 - L2 LINE L2 -72 3200 2911 2048 134 7 0 chr20 34032588 34032893 -38120989 + AluSg SINE Alu 1 307 -3 367 104 15 15 chr20 34032899 34032966 -38120916 + (GAAAA)n Simple_repeat Simple_repeat 4 70 0 1958 117 28 7 chr20 34032977 34033096 -38120786 + AluSx SINE Alu 5 120 -192 297 19 19 39 chr20 34033096 34033148 -38120734 + (CAAA)n Simple_repeat Simple_repeat 2 52 0 1958 117 28 7 chr20 34033148 34033318 -38120564 + AluSx SINE Alu 120 300 -12 300 239 193 0 chr20 34033689 34033777 -38120105 - MIR SINE MIR -70 192 88 519 246 46 15 chr20 34033791 34033921 -38119961 - L2 LINE L2 -5 3267 3134 259 295 115 0 chr20 34033991 34034075 -38119807 - L1ME4a LINE L1 0 6121 6048 225 108 0 0 chr20 34034075 34034112 -38119770 + (TA)n Simple_repeat Simple_repeat 2 38 0 259 295 115 0 chr20 34034112 34034166 -38119716 - L1ME4a LINE L1 -73 6048 5967 731 259 100 9 chr20 34034203 34034423 -38119459 + MIR SINE MIR 2 241 -21 199 200 22 22 chr20 34034389 34034434 -38119448 + L2 LINE L2 3211 3255 -17 * 305 248 30 30 chr20 34034455 34034556 -38119326 - L1ME4a LINE L1 -399 5722 5622 388 174 147 11 chr20 34034773 34034878 -38119004 + MIR SINE MIR 82 200 -62 210 37 0 0 chr20 34034952 34034979 -38118903 + (CAT)n Simple_repeat Simple_repeat 2 28 0 310 311 77 0 chr20 34035066 34035183 -38118699 - MIR SINE MIR -61 147 53 746 214 19 42 chr20 34035298 34035513 -38118369 + MER20B DNA MER1_type 570 779 -4 584 216 7 13 chr20 34035595 34035748 -38118134 - L1MD2 LINE L1 -13 6346 6195 2367 226 93 15 chr20 34035758 34036363 -38117519 - L1MC4a LINE L1 -159 7649 6982 213 94 0 0 chr20 34036363 34036395 -38117487 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 2367 226 93 15 chr20 34036395 34036475 -38117407 - L1MC4a LINE L1 -826 6982 6910 2253 103 0 0 chr20 34036478 34036780 -38117102 - AluSq SINE Alu -11 302 1 668 300 35 35 chr20 34037670 34037897 -38115985 + MIR SINE MIR 20 246 -16 337 276 39 100 chr20 34038318 34038597 -38115285 - L2 LINE L2 -40 3273 3012 264 277 35 7 chr20 34038850 34038991 -38114891 + L2 LINE L2 2514 2658 -656 1690 183 79 40 chr20 34038995 34039449 -38114433 - MER66A LTR ERV1 0 478 94 224 276 119 48 chr20 34039523 34039733 -38114149 + L2 LINE L2 2650 2874 -440 1076 80 0 0 chr20 34039922 34040059 -38113823 + AluSx SINE Alu 1 137 -175 340 222 33 22 chr20 34040059 34040149 -38113733 + LTR30 LTR ERV1 552 642 -80 2468 78 0 18 chr20 34040149 34040480 -38113402 + pTR5 LTR ERV1 66 390 -2048 443 147 0 0 chr20 34040480 34040548 -38113334 + AluS SINE Alu 229 296 -14 6361 105 14 37 chr20 34040548 34040593 -38113289 - LOR1-int LTR ERV1 -5013 3107 3062 10448 27 1 108 chr20 34040593 34042151 -38111731 + SVA Other Other 1 1394 0 6361 105 14 37 chr20 34042151 34043256 -38110626 - LOR1-int LTR ERV1 -5058 3062 1879 2373 69 0 0 chr20 34043256 34043561 -38110321 - AluY SINE Alu -6 305 1 6361 105 14 37 chr20 34043561 34043710 -38110172 - LOR1-int LTR ERV1 -6241 1879 1728 1180 145 0 0 chr20 34043713 34043899 -38109983 + AluSx SINE Alu 119 304 -6 1091 218 242 16 chr20 34044544 34044934 -38108948 - MLT1G3 LTR MaLR 0 530 43 3409 115 21 2 chr20 34044981 34045461 -38108421 - MER41E LTR ERV1 0 512 24 271 258 0 30 chr20 34045662 34045728 -38108154 - MIR3 SINE MIR -41 167 104 1042 269 122 76 chr20 34045788 34046256 -38107626 - MLT1H1 LTR MaLR -18 531 1 267 299 86 37 chr20 34046418 34046686 -38107196 + L1ME4a LINE L1 5841 6121 0 478 323 57 40 chr20 34047056 34047112 -38106770 - MIR SINE MIR -6 256 202 2720 96 3 0 chr20 34047112 34047466 -38106416 + THE1A LTR MaLR 1 355 0 12127 88 4 1 chr20 34047466 34049041 -38104841 + THE1A-int LTR MaLR 1 1580 0 2713 96 3 0 chr20 34049041 34049395 -38104487 + THE1A LTR MaLR 1 355 0 478 323 57 40 chr20 34049395 34049584 -38104298 - MIR SINE MIR -59 203 5 442 278 50 33 chr20 34050366 34050546 -38103336 - MER5A DNA MER1_type -6 183 1 224 262 110 76 chr20 34050546 34050659 -38103223 - MIR3 SINE MIR -57 151 34 228 244 0 0 chr20 34051267 34051312 -38102570 - L2 LINE L2 -2 3311 3267 214 292 143 20 chr20 34051592 34051738 -38102144 - MIR SINE MIR -24 184 14 438 303 37 62 chr20 34051744 34051988 -38101894 - MIR SINE MIR -9 253 16 408 298 10 0 chr20 34052478 34052582 -38101300 - MIR SINE MIR -110 152 48 1705 138 0 4 chr20 34052810 34053078 -38100804 + AluJb SINE Alu 33 299 -13 1266 191 62 4 chr20 34053093 34053349 -38100533 - AluJo SINE Alu -33 279 9 277 235 37 12 chr20 34053368 34053449 -38100433 + Charlie2 DNA MER1_type 223 305 -2477 1363 215 81 53 chr20 34053473 34054004 -38099878 + Charlie2 DNA MER1_type 1900 2445 -417 2153 101 14 40 chr20 34054026 34054211 -38099671 - L1PB1 LINE L1 0 6151 5978 1947 99 0 7 chr20 34054211 34054483 -38099399 - AluSc SINE Alu -39 270 1 2153 101 14 40 chr20 34054483 34054644 -38099238 - L1PB1 LINE L1 -173 5978 5814 2367 72 3 16 chr20 34054695 34055013 -38098869 - L1PB1 LINE L1 -341 5810 5497 1096 299 79 17 chr20 34055046 34055514 -38098368 + L2 LINE L2 2817 3313 0 1060 190 22 105 chr20 34055543 34055701 -38098181 + Charlie2 DNA MER1_type 2468 2581 -281 2231 102 0 13 chr20 34055701 34056016 -38097866 - AluSx SINE Alu -1 311 1 1060 190 22 105 chr20 34056016 34056220 -38097662 + Charlie2 DNA MER1_type 2581 2800 -62 2116 249 58 33 chr20 34056230 34056830 -38097052 + L1ME3A LINE L1 5456 6077 -93 2141 143 13 40 chr20 34056830 34057228 -38096654 - MLT1B LTR MaLR -2 388 2 2116 249 58 33 chr20 34057228 34057317 -38096565 + L1ME3A LINE L1 6077 6162 -8 194 231 0 28 chr20 34058848 34058956 -38094926 + (CA)n Simple_repeat Simple_repeat 1 105 0 262 235 284 0 chr20 34059323 34059425 -38094457 + MIR SINE MIR 14 145 -63 1703 165 7 0 chr20 34059630 34059915 -38093967 + AluSx SINE Alu 1 287 -25 470 265 73 20 chr20 34060359 34060510 -38093372 - MER104 DNA Tc2 -21 159 1 2055 116 0 13 chr20 34060598 34060936 -38092946 - AluSx SINE Alu 0 312 1 1067 284 41 3 chr20 34060947 34061267 -38092615 - L1ME3 LINE L1 -1 6161 5830 820 205 6 0 chr20 34061317 34061478 -38092404 + L1PB4 LINE L1 5940 6101 -55 630 96 0 0 chr20 34061480 34061563 -38092319 - AluS SINE Alu -227 85 3 271 301 0 24 chr20 34062202 34062285 -38091597 - L2 LINE L2 -10 3303 3223 1461 29 0 0 chr20 34063463 34063633 -38090249 - L1PA2 LINE L1 0 6155 5986 14358 158 16 7 chr20 34067339 34071066 -38082816 - L1MA2 LINE L1 -1 7722 3961 3964 152 11 2 chr20 34071313 34071925 -38081957 - L1MA2 LINE L1 -6234 1331 714 2131 104 0 3 chr20 34072151 34072450 -38081432 + AluSx SINE Alu 5 302 -10 572 255 169 9 chr20 34072518 34072749 -38081133 - L1ME3 LINE L1 -295 5826 5559 480 283 12 30 chr20 34072766 34072932 -38080950 - MIR SINE MIR -4 258 96 527 132 11 0 chr20 34073029 34073120 -38080762 + GA-rich Low_complexity Low_complexity 1 92 0 253 260 62 10 chr20 34073167 34073263 -38080619 + L1MC4a LINE L1 6074 6174 -1634 1864 160 7 0 chr20 34073311 34073605 -38080277 + AluJb SINE Alu 5 300 -12 514 203 13 0 chr20 34074517 34074675 -38079207 + (TGGA)n Simple_repeat Simple_repeat 3 162 0 227 254 34 0 chr20 34075061 34075120 -38078762 + L3 LINE CR1 1516 1576 -1 263 312 0 0 chr20 34075129 34075206 -38078676 - Charlie8 DNA MER1_type 0 2417 2341 663 249 156 13 chr20 34075252 34075477 -38078405 - Charlie8 DNA MER1_type -2152 265 9 488 200 310 0 chr20 34075635 34075780 -38078102 - MIR SINE MIR -66 196 7 2253 58 3 14 chr20 34075807 34076125 -38077757 + AluSc SINE Alu 1 309 0 1801 220 58 5 chr20 34076869 34077247 -38076635 - LTR16C LTR ERVL -7 484 87 2028 142 0 0 chr20 34077639 34077949 -38075933 + AluSx SINE Alu 1 310 -2 365 216 72 10 chr20 34078003 34078100 -38075782 - MIR SINE MIR -93 169 67 1205 178 28 0 chr20 34078153 34078366 -38075516 + MER20 DNA MER1_type 1 219 0 274 230 132 69 chr20 34078416 34078590 -38075292 - MIR3 SINE MIR -12 196 12 213 299 73 73 chr20 34079098 34079262 -38074620 + L2 LINE L2 3139 3302 -11 353 302 23 0 chr20 34079293 34079422 -38074460 + (TGGA)n Simple_repeat Simple_repeat 1 132 0 666 148 0 0 chr20 34079428 34079543 -38074339 + (GGGA)n Simple_repeat Simple_repeat 4 118 0 206 272 22 33 chr20 34079571 34079663 -38074219 + GA-rich Low_complexity Low_complexity 1 91 0 * 387 318 24 0 chr20 34079625 34079795 -38074087 + (TGGA)n Simple_repeat Simple_repeat 3 176 0 376 290 5 10 chr20 34080440 34080542 -38073340 + MIR SINE MIR 63 153 -55 503 210 57 32 chr20 34080548 34080705 -38073177 + MER104 DNA Tc2 4 164 -16 2203 90 17 0 chr20 34080818 34081117 -38072765 - AluSx SINE Alu -8 304 1 290 250 216 0 chr20 34081356 34081444 -38072438 + MIR SINE MIR 152 258 -4 449 291 0 14 chr20 34082617 34082758 -38071124 + MIR3 SINE MIR 5 143 -65 2136 144 0 3 chr20 34083371 34083676 -38070206 + AluJb SINE Alu 1 304 -8 183 271 0 100 chr20 34083784 34083854 -38070028 - L3 LINE CR1 -1282 295 233 184 314 57 14 chr20 34084070 34084140 -38069742 + MIR3 SINE MIR 9 81 -127 * 282 329 0 0 chr20 34084136 34084209 -38069673 + MIR SINE MIR 111 183 -79 258 180 0 0 chr20 34084235 34084285 -38069597 + Alu SINE Alu 253 302 0 401 271 0 9 chr20 34084543 34084650 -38069232 + MIR SINE MIR 39 144 -64 198 0 0 0 chr20 34085017 34085039 -38068843 + (TTTTTA)n Simple_repeat Simple_repeat 2 23 0 446 331 0 0 chr20 34085039 34085172 -38068710 - MIR SINE MIR -32 230 98 258 252 206 0 chr20 34085194 34085301 -38068581 + MIR SINE MIR 29 157 -105 475 307 12 18 chr20 34085355 34085521 -38068361 - MIR SINE MIR -60 202 38 182 322 17 0 chr20 34086431 34086490 -38067392 - MER5A DNA MER1_type -2 187 128 181 254 73 0 chr20 34086442 34086497 -38067385 + MER5A DNA MER1_type 22 80 -109 * 181 268 134 59 chr20 34086565 34086804 -38067078 + L2 LINE L2 1834 2090 -1224 1127 272 81 18 chr20 34086820 34087217 -38066665 + MLT1K LTR MaLR 167 588 0 2331 112 0 0 chr20 34087642 34087945 -38065937 - AluSx SINE Alu -9 303 1 243 286 66 35 chr20 34088021 34088202 -38065680 - MIR SINE MIR -66 142 5 618 315 56 14 chr20 34088209 34088425 -38065457 - MIR SINE MIR -14 248 24 198 342 81 19 chr20 34088666 34088827 -38065055 + L2 LINE L2 3102 3272 0 237 358 73 0 chr20 34088943 34089066 -38064816 - L2 LINE L2 -19 3253 3122 1869 94 4 0 chr20 34089206 34089440 -38064442 + AluSx SINE Alu 2 236 -76 24 0 0 0 chr20 34089448 34089472 -38064410 + AT_rich Low_complexity Low_complexity 1 24 0 948 202 22 6 chr20 34089499 34089682 -38064200 + MIR SINE MIR 13 198 -64 483 246 11 11 chr20 34090155 34090330 -38063552 + CT-rich Low_complexity Low_complexity 4 178 0 276 259 24 12 chr20 34090367 34090452 -38063430 - L2 LINE L2 -1 3271 3186 203 171 0 24 chr20 34091490 34091531 -38062351 + GA-rich Low_complexity Low_complexity 1 40 0 26 0 0 0 chr20 34091626 34091652 -38062230 + AT_rich Low_complexity Low_complexity 1 26 0 2327 110 3 0 chr20 34091672 34091981 -38061901 - AluSq SINE Alu -3 310 1 274 186 43 14 chr20 34091981 34092051 -38061831 - Tigger5 DNA MER2_type -1 2322 2251 264 151 38 0 chr20 34092021 34092074 -38061808 - Tigger5 DNA MER2_type -2268 55 1 * 595 271 17 58 chr20 34092136 34092358 -38061524 - MIR SINE MIR -43 219 7 224 125 0 0 chr20 34092427 34092459 -38061423 - MIR SINE MIR -63 145 114 337 307 44 0 chr20 34093146 34093260 -38060622 + MIR SINE MIR 92 210 -52 452 291 47 0 chr20 34093382 34093530 -38060352 + MIR3 SINE MIR 54 208 0 385 331 96 68 chr20 34094226 34094549 -38059333 - L2 LINE L2 -8 3264 2933 492 285 49 7 chr20 34094557 34094701 -38059181 + MIR SINE MIR 17 166 -96 411 316 130 17 chr20 34095124 34095538 -38058344 - L1MC/D LINE L1 -2093 5715 5255 301 267 13 0 chr20 34095760 34095835 -38058047 - MIR SINE MIR -58 150 75 380 240 20 82 chr20 34095847 34096043 -38057839 - HAL1 LINE L1 -321 2186 2003 1759 148 69 4 chr20 34096081 34096358 -38057524 - AluJb SINE Alu -17 295 1 3733 102 32 7 chr20 34096443 34097038 -38056844 - L1PA8 LINE L1 -1021 5125 4516 7159 67 4 0 chr20 34097038 34098078 -38055804 + L1PA8 LINE L1 5128 6171 -1 337 308 38 45 chr20 34098087 34098220 -38055662 - HAL1 LINE L1 -647 1860 1729 521 352 11 6 chr20 34098389 34098565 -38055317 + MIR SINE MIR 77 253 -9 2280 88 7 0 chr20 34099154 34099468 -38054414 - AluSp SINE Alu 0 316 1 289 335 49 24 chr20 34099473 34099637 -38054245 + MIR SINE MIR 25 192 -70 2171 138 0 0 chr20 34100293 34100590 -38053292 + AluJb SINE Alu 1 297 -15 399 190 245 49 chr20 34100663 34100826 -38053056 + MIR SINE MIR 68 262 0 517 278 98 10 chr20 34101310 34101515 -38052367 + MIR SINE MIR 9 231 -31 771 254 10 0 chr20 34101523 34101720 -38052162 - L1M4 LINE L1 -3559 2587 2389 192 77 0 0 chr20 34101720 34101746 -38052136 + (TAA)n Simple_repeat Simple_repeat 2 27 0 415 313 87 48 chr20 34102305 34102606 -38051276 + L2 LINE L2 2705 3014 -258 408 173 58 122 chr20 34102708 34102736 -38051146 - L2 LINE L2 -1 3271 3243 2249 114 0 3 chr20 34102736 34103035 -38050847 + AluSx SINE Alu 1 298 -14 408 173 58 122 chr20 34103035 34103145 -38050737 - L2 LINE L2 -29 3243 3142 222 312 39 0 chr20 34103337 34103414 -38050468 - L2 LINE L2 -244 3069 2990 336 314 10 0 chr20 34103476 34103578 -38050304 + L2 LINE L2 3169 3271 -1 21 36 0 0 chr20 34104197 34104225 -38049657 + AT_rich Low_complexity Low_complexity 1 28 0 232 310 9 69 chr20 34104334 34104450 -38049432 + MER5A DNA MER1_type 66 174 -15 421 264 36 0 chr20 34104459 34104569 -38049313 + MER5A DNA MER1_type 2 115 -74 2071 141 0 0 chr20 34104812 34105132 -38048750 + AluSx SINE Alu 1 320 0 1951 158 3 6 chr20 34105600 34105911 -38047971 + AluSx SINE Alu 1 310 -2 603 273 0 0 chr20 34105954 34106086 -38047796 - MIR SINE MIR -52 210 79 182 239 39 115 chr20 34106756 34106886 -38046996 + MIR SINE MIR 9 128 -134 322 265 98 23 chr20 34107178 34107310 -38046572 - MIR3 SINE MIR -22 186 45 291 184 0 0 chr20 34107314 34107363 -38046519 - L2 LINE L2 0 3313 3265 472 286 19 19 chr20 34107887 34108048 -38045834 - MIR SINE MIR -72 190 30 202 185 309 25 chr20 34108046 34108127 -38045755 - MIR SINE MIR -121 141 38 * 809 200 98 36 chr20 34108686 34108911 -38044971 + MIR SINE MIR 16 254 -8 821 227 132 40 chr20 34109042 34109346 -38044536 + MLT1J LTR MaLR 10 341 -170 226 270 14 14 chr20 34109470 34109544 -38044338 + MIR SINE MIR 67 140 -68 230 261 0 0 chr20 34109608 34109654 -38044228 - L2 LINE L2 -12 3301 3256 235 244 0 0 chr20 34109654 34109699 -38044183 + MER20 DNA MER1_type 13 57 -162 1552 157 14 27 chr20 34109699 34110049 -38043833 - MER4A LTR ERV1 0 664 261 474 135 34 11 chr20 34110049 34110138 -38043744 - MER4A LTR ERV1 -566 98 8 416 35 17 0 chr20 34110138 34110196 -38043686 + (TTTA)n Simple_repeat Simple_repeat 2 60 0 9880 29 1 204 chr20 34110196 34111911 -38041971 - SVA Other Other -19 1367 1 653 217 50 25 chr20 34111968 34112129 -38041753 + MER20 DNA MER1_type 54 218 -1 2449 63 7 10 chr20 34112130 34112430 -38041452 + AluY SINE Alu 1 299 -12 227 159 0 0 chr20 34112692 34112736 -38041146 + Alu SINE Alu 255 298 -1 2331 88 112 0 chr20 34113507 34113846 -38040036 + MER51B LTR ERV1 1 377 0 2079 109 11 7 chr20 34113964 34114283 -38039599 - AluSx SINE Alu 0 320 1 2470 95 0 0 chr20 34114864 34115170 -38038712 - AluSc SINE Alu -3 306 1 2323 114 7 0 chr20 34115452 34115758 -38038124 + AluSx SINE Alu 1 308 -4 283 307 0 0 chr20 34116034 34116109 -38037773 - MIR SINE MIR -71 137 63 277 283 9 38 chr20 34116287 34116393 -38037489 + L2 LINE L2 2932 3034 -238 237 108 0 0 chr20 34116636 34116673 -38037209 + (TGAA)n Simple_repeat Simple_repeat 4 40 0 892 222 29 64 chr20 34117939 34118349 -38035533 - MLT1A1 LTR MaLR -6 379 5 498 254 29 29 chr20 34118563 34118701 -38035181 + MIR SINE MIR 48 185 -77 200 312 128 9 chr20 34118714 34118823 -38035059 - MIR SINE MIR -102 160 39 200 306 42 0 chr20 34118895 34118967 -38034915 - MIR3 SINE MIR -37 171 97 317 333 89 60 chr20 34119477 34119792 -38034090 - MLT1J LTR MaLR -159 352 29 233 260 39 65 chr20 34119802 34119879 -38034003 + MIR SINE MIR 109 183 -79 267 232 172 20 chr20 34120121 34120220 -38033662 + MIR SINE MIR 32 145 -63 2267 97 7 0 chr20 34120225 34120515 -38033367 + AluSg SINE Alu 1 292 -18 462 350 108 34 chr20 34121128 34121574 -38032308 - L1ME LINE L1 -5591 479 1 615 112 0 22 chr20 34121685 34121935 -38031947 + AluSx SINE Alu 1 300 -10 340 114 0 25 chr20 34121939 34122018 -38031864 + (CAAA)n Simple_repeat Simple_repeat 4 80 0 304 178 122 84 chr20 34122305 34122412 -38031470 + L1ME4a LINE L1 5975 6085 -36 2116 107 7 13 chr20 34122452 34122772 -38031110 + AluSq SINE Alu 1 313 0 435 226 284 26 chr20 34123219 34123409 -38030473 - MIR SINE MIR -12 250 12 272 262 0 0 chr20 34123632 34123707 -38030175 + MIR SINE MIR 75 146 -62 257 226 12 71 chr20 34123714 34123798 -38030084 + MIR3 SINE MIR 109 187 -21 583 221 44 19 chr20 34124196 34124354 -38029528 + L2 LINE L2 2919 3080 -233 183 271 130 79 chr20 34124646 34124823 -38029059 + L2 LINE L2 3122 3307 -6 406 248 30 10 chr20 34125394 34125495 -38028387 + MIR SINE MIR 110 212 -50 1696 258 55 51 chr20 34125632 34126271 -38027611 + L2 LINE L2 2317 2958 -355 1492 145 6 130 chr20 34126271 34126468 -38027414 - AluJo SINE Alu 0 302 165 195 42 0 0 chr20 34126468 34126492 -38027390 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1492 145 6 130 chr20 34126492 34126639 -38027243 - AluJo SINE Alu -137 165 1 1696 258 55 51 chr20 34126639 34126875 -38027007 + L2 LINE L2 2958 3191 -122 215 297 154 11 chr20 34126989 34127080 -38026802 + L2 LINE L2 3210 3313 0 323 256 16 66 chr20 34127345 34127466 -38026416 + MIR SINE MIR 34 148 -60 298 338 58 26 chr20 34127935 34128108 -38025774 + MIR SINE MIR 15 185 -23 1963 130 11 0 chr20 34128627 34128903 -38024979 + AluJb SINE Alu 11 289 -23 301 252 61 17 chr20 34129388 34129503 -38024379 - L1M LINE L1 -971 5388 5269 1656 208 0 10 chr20 34129522 34129815 -38024067 - AluJb SINE Alu -22 290 1 25 0 0 0 chr20 34129816 34129841 -38024041 + AT_rich Low_complexity Low_complexity 1 25 0 233 163 175 25 chr20 34129849 34129929 -38023953 - HAL1b LINE L1 -625 723 632 205 328 152 24 chr20 34130037 34130162 -38023720 - L3 LINE CR1 -1398 179 39 261 297 0 14 chr20 34131077 34131151 -38022731 + MIR SINE MIR 81 153 -109 * 551 324 62 9 chr20 34131145 34131370 -38022512 - MIR SINE MIR 0 262 26 180 0 0 0 chr20 34132105 34132125 -38021757 + (A)n Simple_repeat Simple_repeat 1 20 0 2316 110 0 19 chr20 34132275 34132583 -38021299 - AluSx SINE Alu -10 302 1 233 347 56 0 chr20 34132833 34132905 -38020977 - MIR SINE MIR -113 149 74 714 298 48 20 chr20 34132916 34133164 -38020718 - MIR SINE MIR 0 262 8 1065 316 20 49 chr20 34133515 34134002 -38019880 - L2 LINE L2 0 3313 2841 446 205 235 25 chr20 34134117 34134317 -38019565 + L2 LINE L2 3015 3256 -57 378 381 70 31 chr20 34134304 34134687 -38019195 - L2 LINE L2 -50 3222 2825 * 1482 173 45 6 chr20 34134883 34135195 -38018687 - MER33 DNA MER1_type 0 324 1 274 274 41 0 chr20 34135330 34135403 -38018479 + Charlie8 DNA MER1_type 33 108 -2309 195 280 80 0 chr20 34136154 34136229 -38017653 + MIR3 SINE MIR 76 156 -52 2031 132 0 0 chr20 34136395 34136683 -38017199 - AluSx SINE Alu -24 288 1 339 85 0 0 chr20 34136687 34136734 -38017148 + (T)n Simple_repeat Simple_repeat 1 47 0 470 285 63 8 chr20 34136757 34136937 -38016945 - MIR SINE MIR -63 199 18 314 323 84 6 chr20 34136902 34137069 -38016813 + L2 LINE L2 2756 2935 -379 * 307 206 48 16 chr20 34137907 34137970 -38015912 + MIR SINE MIR 36 100 -162 745 259 64 18 chr20 34138138 34138358 -38015524 + MIR SINE MIR 32 261 -1 331 283 150 0 chr20 34138378 34138498 -38015384 - MER5A DNA MER1_type -1 188 51 332 189 50 47 chr20 34138740 34138846 -38015036 + L1MC4 LINE L1 1996 6982 -1340 232 345 146 6 chr20 34138882 34139047 -38014835 + MER5A DNA MER1_type 2 189 0 755 287 129 32 chr20 34139256 34139667 -38014215 + L2 LINE L2 2863 3313 0 205 283 30 40 chr20 34140017 34140116 -38013766 + MIR3 SINE MIR 62 159 -49 255 252 94 142 chr20 34140159 34140583 -38013299 + L2 LINE L2 2908 3311 -2 201 242 129 0 chr20 34140898 34140960 -38012922 - MIR SINE MIR -74 188 119 925 274 110 43 chr20 34141658 34141839 -38012043 - L2 LINE L2 -423 2891 2724 2182 90 3 10 chr20 34141839 34142140 -38011742 - AluSg SINE Alu -11 299 1 925 274 110 43 chr20 34142140 34142421 -38011461 - L2 LINE L2 -590 2724 2398 337 281 67 59 chr20 34142541 34142676 -38011206 - L2 LINE L2 0 3272 3137 199 304 76 13 chr20 34143363 34143442 -38010440 + MIR SINE MIR 30 113 -95 509 325 57 25 chr20 34143799 34144082 -38009800 - L1ME LINE L1 -339 5782 5491 1584 202 21 9 chr20 34144095 34144422 -38009460 - MLT1B LTR MaLR 0 390 60 513 263 110 59 chr20 34144543 34144577 -38009305 - L1ME LINE L1 -748 5398 5367 2012 127 3 0 chr20 34144577 34144869 -38009013 - AluSx SINE Alu -19 293 1 513 263 110 59 chr20 34144869 34145306 -38008576 - L1ME LINE L1 -779 5367 4903 282 306 110 57 chr20 34145442 34145490 -38008392 - L1ME LINE L1 -1488 4658 4614 1718 139 56 14 chr20 34145490 34145778 -38008104 + AluJo SINE Alu 1 300 -12 2251 82 0 0 chr20 34145781 34146073 -38007809 + AluY SINE Alu 1 292 -19 282 306 110 57 chr20 34146073 34146547 -38007335 - L1ME LINE L1 -1533 4613 4104 305 287 112 39 chr20 34146557 34146814 -38007068 - L1ME LINE L1 -2099 4047 3810 2102 101 0 23 chr20 34146814 34147121 -38006761 - AluSx SINE Alu -12 300 1 305 287 112 39 chr20 34147121 34147505 -38006377 - L1ME LINE L1 -2336 3810 3359 771 264 55 8 chr20 34147716 34147951 -38005931 - MLT1L LTR MaLR -2 613 368 1284 89 0 0 chr20 34148201 34148381 -38005501 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 410 215 0 25 chr20 34148541 34148620 -38005262 + L2 LINE L2 3237 3313 0 283 243 143 0 chr20 34148632 34148702 -38005180 - MIR SINE MIR -76 186 107 188 227 100 73 chr20 34149312 34149422 -38004460 - MIR SINE MIR -66 142 30 512 187 37 37 chr20 34150209 34150316 -38003566 + MIR SINE MIR 47 153 -109 218 255 0 0 chr20 34150703 34150750 -38003132 + CT-rich Low_complexity Low_complexity 2 48 0 253 279 127 57 chr20 34151001 34151511 -38002371 + L2 LINE L2 2345 2980 -292 362 247 43 32 chr20 34151529 34151622 -38002260 - L2 LINE L2 0 3272 3179 206 380 133 0 chr20 34151651 34151764 -38002118 + L2 LINE L2 3133 3260 -12 * 235 240 0 0 chr20 34151762 34151812 -38002070 - L2 LINE L2 -1 3312 3263 263 272 197 27 chr20 34151834 34151981 -38001901 + MIR SINE MIR 20 191 -71 392 360 50 37 chr20 34152223 34152465 -38001417 + MIR SINE MIR 2 246 -16 246 217 14 29 chr20 34152991 34153060 -38000822 - L2 LINE L2 -82 3231 3164 229 271 0 0 chr20 34153586 34153645 -38000237 - L2 LINE L2 -1 3312 3254 260 252 49 49 chr20 34153728 34153851 -38000031 + L2 LINE L2 3150 3272 0 2128 240 67 27 chr20 34153943 34154573 -37999309 + L1ME3A LINE L1 5505 6159 -11 1730 170 0 3 chr20 34154592 34154875 -37999007 + AluJo SINE Alu 1 282 -30 2061 128 3 0 chr20 34155003 34155299 -37998583 + AluSx SINE Alu 1 297 -15 571 291 49 32 chr20 34155426 34155673 -37998209 - MIR SINE MIR -2 260 10 354 294 44 22 chr20 34156294 34156430 -37997452 - MIR SINE MIR -16 246 108 660 142 0 9 chr20 34156446 34156518 -37997364 + L1MB1 LINE L1 6056 6128 -40 1897 132 6 26 chr20 34156518 34156979 -37996903 + AluSx SINE Alu 1 312 0 660 142 0 9 chr20 34156979 34157019 -37996863 + L1MB1 LINE L1 6128 6167 -1 1702 176 10 0 chr20 34157028 34157324 -37996558 + AluJb SINE Alu 1 299 -13 193 326 22 11 chr20 34157434 34157523 -37996359 + MIR SINE MIR 43 132 -76 2160 119 0 3 chr20 34157887 34158190 -37995692 - AluSx SINE Alu -10 302 1 530 277 76 11 chr20 34158505 34158689 -37995193 + L1ME1 LINE L1 5948 6143 -23 374 235 189 30 chr20 34159447 34159579 -37994303 - MIR SINE MIR -81 181 29 360 256 183 55 chr20 34159907 34160126 -37993756 + MIR SINE MIR 2 248 -14 2118 106 7 3 chr20 34160402 34160705 -37993177 + AluSx SINE Alu 1 304 -8 202 294 203 7 chr20 34160870 34161013 -37992869 + MIR SINE MIR 89 259 -3 274 325 83 0 chr20 34161047 34161167 -37992715 + MIR SINE MIR 54 183 -79 418 275 28 0 chr20 34162427 34162536 -37991346 + MIR SINE MIR 35 146 -62 225 290 0 16 chr20 34162944 34163006 -37990876 + MIR3 SINE MIR 96 156 -52 346 302 81 40 chr20 34163095 34163244 -37990638 + MIR SINE MIR 108 262 0 531 45 0 0 chr20 34163550 34163616 -37990266 + (TG)n Simple_repeat Simple_repeat 2 67 0 388 296 128 25 chr20 34164076 34164279 -37989603 - MIR SINE MIR -33 229 6 414 301 80 16 chr20 34164561 34164748 -37989134 + MIR SINE MIR 31 230 -32 332 304 18 0 chr20 34165016 34165128 -37988754 + (TCCA)n Simple_repeat Simple_repeat 1 114 0 284 257 9 92 chr20 34165634 34165781 -37988101 + MIR SINE MIR 15 145 -63 797 158 6 0 chr20 34166195 34166353 -37987529 + (TGGA)n Simple_repeat Simple_repeat 3 161 0 188 301 68 0 chr20 34166467 34166540 -37987342 + MIR3 SINE MIR 82 159 -49 203 244 0 0 chr20 34167242 34167283 -37986599 + (TCCA)n Simple_repeat Simple_repeat 4 44 0 439 292 11 6 chr20 34168467 34168645 -37985237 + (CA)n Simple_repeat Simple_repeat 2 180 0 1688 186 7 0 chr20 34169283 34169573 -37984309 + AluSx SINE Alu 1 292 -20 4342 133 53 1 chr20 34169591 34170293 -37983589 + L1PA15 LINE L1 5428 6165 0 1679 153 0 80 chr20 34170813 34171152 -37982730 + AluJo SINE Alu 1 312 0 393 188 80 36 chr20 34171241 34171353 -37982529 - MIR3 SINE MIR -7 201 85 2602 235 31 20 chr20 34172238 34172873 -37981009 + L1M4 LINE L1 5 646 -5896 913 171 92 22 chr20 34172907 34173285 -37980597 + LTR54B LTR ERV1 1 456 -42 4302 206 55 21 chr20 34173603 34174535 -37979347 - MER70-int LTR ERVL -1114 4540 2715 2007 164 88 35 chr20 34174672 34175105 -37978777 - MSTB2 LTR MaLR 0 457 2 10984 206 45 7 chr20 34175206 34177425 -37976457 - MER70-int LTR ERVL -2299 2724 421 2202 181 45 24 chr20 34178272 34178809 -37975073 + L1M4 LINE L1 851 1398 -5144 2331 59 0 20 chr20 34178817 34179123 -37974759 - AluY SINE Alu -11 300 1 24 0 0 0 chr20 34179134 34179158 -37974724 + AT_rich Low_complexity Low_complexity 1 24 0 195 194 0 42 chr20 34179177 34179249 -37974633 + (TA)n Simple_repeat Simple_repeat 2 70 0 3846 118 16 26 chr20 34179250 34179280 -37974602 - L1MA2 LINE L1 -27 6277 6248 1982 142 0 3 chr20 34179280 34179590 -37974292 - AluSx SINE Alu -3 309 1 3846 118 16 26 chr20 34179590 34180178 -37973704 - L1MA2 LINE L1 -56 6248 5665 3296 224 76 24 chr20 34180177 34180379 -37973503 + L1M4 LINE L1 1392 1582 -5062 * 1718 170 27 0 chr20 34180379 34180679 -37973203 + AluSx SINE Alu 1 308 -4 3296 224 76 24 chr20 34180679 34182335 -37971547 + L1M4 LINE L1 1582 3365 -3279 414 244 56 0 chr20 34182453 34182543 -37971339 + AluS SINE Alu 1 95 -208 655 258 0 40 chr20 34182852 34183046 -37970836 + L1P4 LINE L1 5435 5616 -558 2259 103 0 22 chr20 34183337 34183656 -37970226 + AluSq SINE Alu 1 312 -1 357 259 27 76 chr20 34183747 34183884 -37969998 - L1ME2 LINE L1 -16 6148 6029 1938 147 0 0 chr20 34183884 34184184 -37969698 + AluSx SINE Alu 1 300 -12 357 259 27 76 chr20 34184184 34184309 -37969573 - L1ME2 LINE L1 -135 6029 5899 434 211 32 2 chr20 34184313 34184420 -37969462 + L1MD2 LINE L1 5590 5685 -481 24 0 0 0 chr20 34184434 34184458 -37969424 + GC_rich Low_complexity Low_complexity 1 24 0 2069 132 0 7 chr20 34184480 34184760 -37969122 - AluSx SINE Alu -34 278 1 812 191 32 0 chr20 34184769 34184926 -37968956 + L1MD2 LINE L1 5694 5855 -504 325 326 84 37 chr20 34185064 34185279 -37968603 - L1MDa LINE L1 -6309 231 7 424 314 45 19 chr20 34185345 34185501 -37968381 + HERV16 LTR ERVL 2473 2632 -2364 2058 103 6 32 chr20 34185513 34185534 -37968348 - HSMAR2 DNA Mariner -965 337 317 2133 115 54 3 chr20 34185534 34185830 -37968052 + AluSx SINE Alu 1 311 -1 2058 103 6 32 chr20 34185830 34186149 -37967733 - HSMAR2 DNA Mariner -985 317 6 842 240 15 2 chr20 34186152 34186348 -37967534 - MLT2F LTR ERVL -47 616 183 194 222 79 0 chr20 34186431 34186494 -37967388 + MIR SINE MIR 27 94 -114 2285 71 0 0 chr20 34186535 34186803 -37967079 - AluY SINE Alu -12 299 32 2030 180 118 52 chr20 34187007 34187530 -37966352 - MLT1F1 LTR MaLR 0 567 10 608 266 38 117 chr20 34187829 34188360 -37965522 - MER113 DNA MER1_type? -28 493 5 291 312 0 0 chr20 34188596 34188673 -37965209 - MIR SINE MIR -166 96 20 862 184 11 0 chr20 34188851 34189036 -37964846 + MER53 DNA DNA 2 188 -1 2031 122 64 9 chr20 34189040 34189385 -37964497 + THE1C LTR MaLR 1 364 -11 1491 326 66 34 chr20 34189478 34190228 -37963654 + HERV16 LTR ERVL 3053 3834 -1820 1836 164 17 0 chr20 34190228 34190515 -37963367 + AluJb SINE Alu 1 292 -20 1491 326 66 34 chr20 34190515 34190597 -37963285 + HERV16 LTR ERVL 3834 3912 -1742 1102 343 21 0 chr20 34190595 34191024 -37962858 + HERV16 LTR ERVL 4178 4615 -870 * 2053 209 48 29 chr20 34191065 34191586 -37962296 - MLT1F LTR MaLR -9 533 3 261 336 43 43 chr20 34191955 34192232 -37961650 + HERV16 LTR ERVL 5048 5324 -161 2081 149 10 56 chr20 34192278 34192442 -37961440 - MLT1B LTR MaLR 0 390 220 1321 184 5 119 chr20 34192442 34192854 -37961028 + MLT1A1 LTR MaLR 1 365 0 2081 149 10 56 chr20 34192854 34192963 -37960919 - MLT1B LTR MaLR -170 220 140 2131 142 0 3 chr20 34192963 34193265 -37960617 + AluJb SINE Alu 1 301 -11 2081 149 10 56 chr20 34193265 34193399 -37960483 - MLT1B LTR MaLR -250 140 1 948 269 98 12 chr20 34193466 34193883 -37959999 + LTR16A1 LTR ERVL 5 457 0 2367 107 0 3 chr20 34193974 34194282 -37959600 + AluSx SINE Alu 1 307 -5 2053 135 10 10 chr20 34194292 34194603 -37959279 + AluJo SINE Alu 1 311 -1 326 250 26 142 chr20 34195243 34195475 -37958407 - L1MC5 LINE L1 -35 7926 7722 2121 117 0 0 chr20 34195477 34195751 -37958131 + AluSq SINE Alu 1 274 -39 225 0 0 0 chr20 34195752 34195777 -37958105 + (GA)n Simple_repeat Simple_repeat 2 26 0 21 0 0 0 chr20 34195777 34195798 -37958084 + AT_rich Low_complexity Low_complexity 1 21 0 198 71 0 0 chr20 34195921 34195949 -37957933 + (GTTTG)n Simple_repeat Simple_repeat 5 32 0 1488 187 60 8 chr20 34195950 34196218 -37957664 - AluJo SINE Alu -25 287 6 238 286 63 107 chr20 34196261 34196513 -37957369 - L2 LINE L2 -1 3312 3072 367 310 88 12 chr20 34196581 34196752 -37957130 + MIR SINE MIR 71 254 -8 354 357 83 47 chr20 34196841 34197180 -37956702 - L2 LINE L2 -101 3171 2821 2784 216 39 24 chr20 34197250 34197913 -37955969 + L1ME2 LINE L1 5466 6138 -26 292 271 124 6 chr20 34198439 34198616 -37955266 + L1MC4 LINE L1 7836 8033 -9 201 322 27 20 chr20 34198637 34198783 -37955099 - L2 LINE L2 -615 2699 2553 247 198 27 155 chr20 34199865 34199940 -37953942 - MER113 DNA MER1_type? -328 193 155 2462 93 3 0 chr20 34199940 34200252 -37953630 + AluSp SINE Alu 1 313 0 247 198 27 155 chr20 34200252 34200363 -37953519 - MER113 DNA MER1_type? -366 155 31 513 264 20 27 chr20 34200422 34200570 -37953312 + MIR SINE MIR 16 162 -100 2286 115 23 0 chr20 34200624 34200929 -37952953 + AluSx SINE Alu 1 312 0 363 44 0 0 chr20 34201045 34201090 -37952792 + (TG)n Simple_repeat Simple_repeat 1 45 0 321 262 42 77 chr20 34201240 34201408 -37952474 + L2 LINE L2 3150 3311 -2 203 191 0 21 chr20 34202212 34202259 -37951623 - MIR SINE MIR -136 126 81 301 280 9 9 chr20 34202351 34202458 -37951424 + GA-rich Low_complexity Low_complexity 2 108 0 393 250 0 20 chr20 34202681 34203089 -37950793 + C-rich Low_complexity Low_complexity 1 399 0 209 136 0 45 chr20 34203770 34203814 -37950068 + L2 LINE L2 3149 3190 -82 262 273 94 23 chr20 34204139 34204267 -37949615 - L1ME4a LINE L1 -22 6099 5963 24 32 0 0 chr20 34204268 34204299 -37949583 + AT_rich Low_complexity Low_complexity 1 31 0 259 318 23 0 chr20 34204371 34204459 -37949423 - L1ME4a LINE L1 -340 5781 5692 337 258 54 11 chr20 34204641 34204734 -37949148 - MIR3 SINE MIR -45 163 67 303 218 0 0 chr20 34204850 34204905 -37948977 - MER117 DNA MER1_type -47 150 96 374 311 36 9 chr20 34205185 34205345 -37948537 + MIR SINE MIR 3 164 -58 214 186 0 0 chr20 34205348 34205391 -37948491 + MIR SINE MIR 108 150 -112 330 87 0 0 chr20 34205531 34205577 -37948305 + (TC)n Simple_repeat Simple_repeat 1 46 0 249 316 44 0 chr20 34206473 34206587 -37947295 - L2 LINE L2 -277 3036 2918 1739 149 0 44 chr20 34206711 34207007 -37946875 - AluSx SINE Alu -13 299 17 290 308 40 1 chr20 34207051 34207186 -37946696 - MIR SINE MIR -35 173 31 338 279 79 8 chr20 34207929 34208118 -37945764 + MIR3 SINE MIR 3 202 -60 658 242 12 6 chr20 34208297 34208462 -37945420 - MIR SINE MIR -48 214 49 243 346 55 0 chr20 34209318 34209445 -37944437 - L2 LINE L2 -213 3059 2926 702 237 95 14 chr20 34209751 34209962 -37943920 - MIR SINE MIR -6 256 29 488 286 23 0 chr20 34210057 34210190 -37943692 - L2 LINE L2 0 3272 3137 264 59 0 0 chr20 34210533 34210567 -37943315 + (TC)n Simple_repeat Simple_repeat 2 35 0 415 289 65 35 chr20 34210760 34210992 -37942890 - L2 LINE L2 -220 3052 2814 2568 65 0 16 chr20 34211096 34211406 -37942476 + AluY SINE Alu 1 305 -6 707 253 46 6 chr20 34211406 34211580 -37942302 - MIR SINE MIR -5 257 77 207 253 130 55 chr20 34212210 34212356 -37941526 + MIR3 SINE MIR 15 149 -59 492 209 21 2 chr20 34212392 34212566 -37941316 - MER20 DNA MER1_type -7 212 2 666 252 13 0 chr20 34212878 34213036 -37940846 - LTR16C LTR ERVL -37 454 295 287 159 128 141 chr20 34213036 34213236 -37940646 - LTR41 LTR ERVL 0 795 577 646 235 56 0 chr20 34213526 34213688 -37940194 - LTR41 LTR ERVL -586 187 17 798 271 21 5 chr20 34213692 34213880 -37940002 - LTR16C LTR ERVL -192 299 109 186 159 0 188 chr20 34213880 34213949 -37939933 - MIR3 SINE MIR -141 67 12 2438 109 0 0 chr20 34214763 34215076 -37938806 + AluSq SINE Alu 1 313 0 1964 233 184 22 chr20 34215742 34216553 -37937329 - L2 LINE L2 -338 2976 2035 252 293 85 12 chr20 34216809 34216891 -37936991 - MIR3 SINE MIR -27 181 94 314 298 111 18 chr20 34217110 34217281 -37936601 + MIR SINE MIR 65 251 -11 360 233 78 9 chr20 34217425 34217541 -37936341 + MIR3 SINE MIR 56 179 -29 1820 198 35 21 chr20 34217876 34218306 -37935576 + MER63B DNA MER1_type 1 436 0 2282 118 0 3 chr20 34218580 34218886 -37934996 - AluSx SINE Alu -6 306 2 1680 176 10 20 chr20 34219220 34219526 -37934356 + AluJb SINE Alu 1 303 -9 726 280 12 32 chr20 34270380 34270630 -37883252 + MIR SINE MIR 5 249 -13 1736 166 4 0 chr20 34271475 34271752 -37882130 + AluJb SINE Alu 13 290 -22 613 256 156 0 chr20 34271799 34271979 -37881903 - MIR SINE MIR -7 255 48 242 259 105 31 chr20 34271971 34272133 -37881749 - L2 LINE L2 -315 2998 2825 * 200 355 8 16 chr20 34272461 34272582 -37881300 + L2 LINE L2 2715 2834 -480 296 321 48 36 chr20 34272615 34272780 -37881102 + L2 LINE L2 2933 3099 -173 930 286 100 30 chr20 34272888 34273328 -37880554 + L2 LINE L2 2843 3313 0 318 278 9 26 chr20 34273823 34273938 -37879944 + Charlie8 DNA MER1_type 29 141 -2276 325 203 0 76 chr20 34273943 34274022 -37879860 - MLT1C LTR MaLR 0 467 395 1522 192 7 3 chr20 34274023 34274310 -37879572 + AluJb SINE Alu 4 291 -21 1885 144 0 0 chr20 34274329 34274614 -37879268 + AluSx SINE Alu 14 298 -14 900 160 90 0 chr20 34274632 34274788 -37879094 + FAM SINE Alu 5 174 -1 307 239 78 0 chr20 34275082 34275184 -37878698 - MIR SINE MIR -59 149 49 344 287 69 0 chr20 34275605 34275706 -37878176 - MIR SINE MIR -67 141 34 315 281 8 70 chr20 34275798 34275883 -37877999 + MIR SINE MIR 66 142 -120 2153 114 3 0 chr20 34275883 34276182 -37877700 + AluSx SINE Alu 1 300 -12 315 281 8 70 chr20 34276182 34276224 -37877658 + MIR SINE MIR 142 185 -77 496 303 78 78 chr20 34276309 34276408 -37877474 - Charlie8 DNA MER1_type -1926 491 393 2117 127 0 3 chr20 34276408 34276716 -37877166 - AluSx SINE Alu -5 307 1 496 303 78 78 chr20 34276716 34277015 -37876867 - Charlie8 DNA MER1_type -2023 394 93 2163 117 3 0 chr20 34277305 34277614 -37876268 - AluSx SINE Alu -2 310 1 617 293 15 15 chr20 34277783 34277981 -37875901 + MIR SINE MIR 46 243 -19 366 314 11 29 chr20 34278087 34278117 -37875765 + GA-rich Low_complexity Low_complexity 2 31 -142 1981 109 7 0 chr20 34278117 34278391 -37875491 + AluSx SINE Alu 5 280 -32 366 314 11 29 chr20 34278391 34278535 -37875347 + GA-rich Low_complexity Low_complexity 31 173 0 770 299 18 5 chr20 34278838 34279059 -37874823 + MIR SINE MIR 35 258 -4 362 293 34 0 chr20 34279335 34279461 -37874421 - MIR SINE MIR -62 146 22 1005 136 6 19 chr20 34279580 34279742 -37874140 + AluSg/x SINE Alu 121 280 -32 267 309 25 0 chr20 34280178 34280259 -37873623 + MIR SINE MIR 148 230 -32 516 228 107 7 chr20 34280382 34280531 -37873351 - MIR SINE MIR -77 185 22 894 234 73 5 chr20 34280618 34280836 -37873046 - MIR SINE MIR -27 235 3 378 209 23 0 chr20 34280868 34280954 -37872928 - MIR SINE MIR -87 121 34 2197 130 51 23 chr20 34281203 34281557 -37872325 - THE1B LTR MaLR 0 364 1 825 127 0 8 chr20 34282688 34282806 -37871076 + AluY SINE Alu 3 119 -192 533 208 145 44 chr20 34282947 34283106 -37870776 - MER5B DNA MER1_type -3 175 1 1246 159 53 0 chr20 34283445 34283653 -37870229 - MER20 DNA MER1_type 0 219 1 1898 159 10 0 chr20 34283839 34284134 -37869748 - AluSx SINE Alu -14 298 1 601 224 46 57 chr20 34284721 34284939 -37868943 + MIR SINE MIR 39 250 -12 294 29 0 0 chr20 34284947 34284982 -37868900 + (TGGA)n Simple_repeat Simple_repeat 4 38 0 516 290 161 0 chr20 34285850 34286043 -37867839 + MIR SINE MIR 28 251 -11 263 270 54 0 chr20 34286460 34286571 -37867311 - AluSg/x SINE Alu 0 300 184 506 279 173 0 chr20 34286626 34286805 -37867077 + MIR SINE MIR 47 256 -6 2287 118 0 3 chr20 34286893 34287197 -37866685 - AluJb SINE Alu -9 303 1 226 269 111 19 chr20 34287882 34287990 -37865892 - L3 LINE CR1 -216 1361 1244 448 250 0 66 chr20 34288057 34288193 -37865689 - MER117 DNA MER1_type -29 168 42 252 263 54 36 chr20 34289008 34289195 -37864687 - L2 LINE L2 -296 2976 2776 1493 249 74 3 chr20 34289567 34289945 -37863937 - MLT1K LTR MaLR -4 584 180 342 220 91 55 chr20 34290089 34290216 -37863666 - MIR SINE MIR -58 150 30 252 292 44 18 chr20 34290800 34290913 -37862969 + Charlie8 DNA MER1_type 156 271 -2146 460 183 148 9 chr20 34290988 34291103 -37862779 + L2 LINE L2 3183 3313 0 1201 103 13 0 chr20 34291470 34291626 -37862256 - AluSq SINE Alu -155 158 1 2224 112 0 0 chr20 34291650 34291937 -37861945 - AluSg SINE Alu -23 287 1 311 257 20 50 chr20 34291940 34292041 -37861841 + L1MEd LINE L1 562 659 -5460 256 26 53 0 chr20 34292101 34292139 -37861743 + MER41A LTR ERV1 401 440 -114 835 136 0 0 chr20 34292146 34292264 -37861618 + FLAM_C SINE Alu 1 118 -25 2145 94 0 4 chr20 34292285 34292562 -37861320 - AluSc SINE Alu -13 296 21 189 175 0 0 chr20 34292676 34292716 -37861166 + (CA)n Simple_repeat Simple_repeat 2 41 0 2527 82 0 0 chr20 34292898 34293204 -37860678 - AluY SINE Alu -3 308 3 442 288 47 6 chr20 34293207 34293377 -37860505 + Charlie8 DNA MER1_type 86 262 -2155 408 257 19 34 chr20 34293888 34294063 -37859819 + MIR SINE MIR 3 166 -51 332 235 148 0 chr20 34294627 34294742 -37859140 + MIR SINE MIR 22 153 -55 249 57 0 0 chr20 34294800 34294835 -37859047 + (TTCA)n Simple_repeat Simple_repeat 1 35 0 943 282 41 12 chr20 34294837 34295181 -37858701 - L2 LINE L2 -15 3298 2945 304 75 0 0 chr20 34295181 34295221 -37858661 - MSTA LTR MaLR -1 427 388 1567 107 0 0 chr20 34295221 34295417 -37858465 + AluSq SINE Alu 1 196 -117 2443 116 58 0 chr20 34295552 34295930 -37857952 - MSTA LTR MaLR -28 400 1 569 209 3 23 chr20 34296053 34296404 -37857478 + (CA)n Simple_repeat Simple_repeat 1 344 0 936 108 0 32 chr20 34296416 34296602 -37857280 + (CA)n Simple_repeat Simple_repeat 1 180 0 416 300 20 0 chr20 34296627 34296727 -37857155 + L2 LINE L2 3169 3270 -2 275 252 130 65 chr20 34296839 34296962 -37856920 + L2 LINE L2 3141 3271 -1 374 325 0 9 chr20 34297025 34297139 -37856743 + MIR SINE MIR 48 160 -102 524 268 56 51 chr20 34297765 34298006 -37855876 + MIR SINE MIR 2 253 -9 309 138 69 0 chr20 34298774 34298832 -37855050 + Alu SINE Alu 237 298 -4 907 137 0 0 chr20 34299126 34299250 -37854632 + FLAM_C SINE Alu 1 124 -19 258 262 167 13 chr20 34299498 34299735 -37854147 - MER102a DNA MER1_type 0 330 58 304 215 63 0 chr20 34299738 34299817 -37854065 - LTR16C LTR ERVL 0 491 408 300 268 71 18 chr20 34299940 34300052 -37853830 + L2 LINE L2 3136 3253 -19 366 211 40 0 chr20 34300115 34300191 -37853691 - MIR SINE MIR -87 121 43 202 150 25 0 chr20 34301342 34301382 -37852500 - MIR SINE MIR -116 146 106 410 268 121 32 chr20 34301445 34301602 -37852280 - MIR SINE MIR -76 186 16 327 234 13 0 chr20 34302006 34302083 -37851799 + MIR SINE MIR 72 149 -113 2127 90 0 60 chr20 34302093 34302414 -37851468 + AluSg SINE Alu 1 303 0 416 301 30 0 chr20 34302946 34303079 -37850803 - MER91C DNA MER1_type -3 137 1 269 310 94 29 chr20 34303104 34303275 -37850607 - L2 LINE L2 0 3272 3091 888 129 18 0 chr20 34305321 34305491 -37848391 + (TGGA)n Simple_repeat Simple_repeat 3 175 0 712 111 17 44 chr20 34305512 34305693 -37848189 + (TGGA)n Simple_repeat Simple_repeat 2 177 0 476 271 75 45 chr20 34306048 34306140 -37847742 + L1ME4a LINE L1 5585 5673 -448 2473 84 13 10 chr20 34306140 34306451 -37847431 + AluSx SINE Alu 1 312 0 476 271 75 45 chr20 34306451 34306624 -37847258 + L1ME4a LINE L1 5673 5858 -263 1739 191 0 10 chr20 34306692 34306991 -37846891 + AluJb SINE Alu 1 296 -16 247 270 87 48 chr20 34306993 34307119 -37846763 + L1ME4a LINE L1 5990 6120 -1 775 318 59 27 chr20 34307172 34307326 -37846556 - L2 LINE L2 -76 3237 3089 2087 130 7 0 chr20 34307326 34307619 -37846263 + AluSx SINE Alu 1 295 -17 775 318 59 27 chr20 34307619 34307979 -37845903 - L2 LINE L2 -224 3089 2705 618 128 0 0 chr20 34307984 34308078 -37845804 - FLAM_A SINE Alu -11 131 38 189 268 54 0 chr20 34308377 34308433 -37845449 - MIR SINE MIR -98 164 106 253 265 186 10 chr20 34308591 34308693 -37845189 + MIR SINE MIR 39 158 -104 253 65 0 43 chr20 34308697 34308743 -37845139 + (GGA)n Simple_repeat Simple_repeat 2 45 0 1963 149 21 0 chr20 34309362 34309651 -37844231 + AluSx SINE Alu 1 295 -17 778 251 24 10 chr20 34309900 34310107 -37843775 - MIR SINE MIR -44 218 3 1358 167 53 18 chr20 34310188 34310416 -37843466 + AluJo SINE Alu 65 300 -12 2061 148 3 0 chr20 34311741 34312039 -37841843 - AluJb SINE Alu -13 299 1 186 253 48 24 chr20 34312128 34312211 -37841671 + L2 LINE L2 2708 2792 -522 428 326 142 35 chr20 34312326 34312611 -37841271 + L2 LINE L2 2839 3187 -126 2011 145 20 0 chr20 34312611 34312907 -37840975 + AluSx SINE Alu 1 302 -10 428 326 142 35 chr20 34312907 34313050 -37840832 + L2 LINE L2 3187 3313 0 236 297 42 42 chr20 34313138 34313256 -37840626 + MIR3 SINE MIR 42 159 -49 190 319 134 17 chr20 34313616 34313735 -37840147 + L2 LINE L2 3181 3313 0 2223 133 0 0 chr20 34313804 34314113 -37839769 + AluSx SINE Alu 1 309 -3 2268 128 0 0 chr20 34314391 34314687 -37839195 - AluY SINE Alu -15 296 1 226 318 18 71 chr20 34314767 34314937 -37838945 + L2 LINE L2 2899 3059 -213 2145 107 35 0 chr20 34315214 34315503 -37838379 + AluSq SINE Alu 1 299 -14 2231 119 7 0 chr20 34315805 34316099 -37837783 + AluSx SINE Alu 1 296 -16 769 252 8 57 chr20 34316132 34316394 -37837488 - LTR43 LTR ERV1 -178 424 176 1269 163 0 33 chr20 34317360 34317575 -37836307 - AluJb SINE Alu -20 292 85 849 117 0 0 chr20 34317663 34317774 -37836108 + AluSq/x SINE Alu 1 111 -201 2056 98 0 4 chr20 34318393 34318658 -37835224 + AluSg SINE Alu 41 304 -6 291 263 31 106 chr20 34318659 34318819 -37835063 - MER91B DNA MER1_type -39 151 4 387 325 30 6 chr20 34319213 34319382 -37834500 - MER5A DNA MER1_type -2 187 15 348 164 0 0 chr20 34320119 34320186 -37833696 - Alu SINE Alu 0 302 236 2566 63 0 0 chr20 34321639 34321942 -37831940 + AluY SINE Alu 1 303 -8 1961 151 0 35 chr20 34322227 34322544 -37831338 - AluJo SINE Alu -6 306 1 2054 145 0 10 chr20 34322552 34322856 -37831026 - AluSx SINE Alu -11 301 1 1852 172 3 3 chr20 34323085 34323381 -37830501 + AluJb SINE Alu 1 296 -16 234 62 0 0 chr20 34323384 34323416 -37830466 + (CA)n Simple_repeat Simple_repeat 2 33 0 1791 167 28 3 chr20 34324159 34324446 -37829436 + AluJb SINE Alu 1 294 -18 390 242 40 24 chr20 34324464 34324588 -37829294 - MIR SINE MIR -19 243 118 180 233 122 56 chr20 34324928 34325018 -37828864 + L2 LINE L2 3218 3313 0 2220 103 27 3 chr20 34325670 34325962 -37827920 + AluSg SINE Alu 1 299 -11 2214 114 7 13 chr20 34326322 34326630 -37827252 + AluSq SINE Alu 1 306 -7 2223 136 0 0 chr20 34326989 34327299 -37826583 - AluSx SINE Alu -2 310 1 318 278 54 108 chr20 34327590 34327717 -37826165 - MIR SINE MIR -12 250 141 2395 88 0 31 chr20 34327717 34328037 -37825845 + AluSx SINE Alu 1 310 -2 318 278 54 108 chr20 34328037 34328150 -37825732 - MIR SINE MIR -121 141 23 2195 107 7 13 chr20 34328297 34328597 -37825285 - AluSq SINE Alu -11 302 5 1842 171 0 13 chr20 34329003 34329312 -37824570 - AluJo SINE Alu -7 305 1 2214 115 3 13 chr20 34329330 34329642 -37824240 - AluSx SINE Alu -1 311 3 226 278 0 111 chr20 34330833 34330959 -37822923 - L2 LINE L2 -2 3311 3200 209 274 0 0 chr20 34331068 34331119 -37822763 + GA-rich Low_complexity Low_complexity 1 51 0 204 179 0 0 chr20 34331131 34331170 -37822712 + GA-rich Low_complexity Low_complexity 1 39 0 928 293 38 54 chr20 34332261 34332763 -37821119 + L1MEc LINE L1 38 531 -5865 2386 106 0 0 chr20 34332927 34333228 -37820654 + AluSx SINE Alu 1 301 -11 1328 290 102 26 chr20 34333258 34333995 -37819887 + L1MEc LINE L1 1202 1994 -4402 2626 195 55 10 chr20 34334198 34334798 -37819084 + L1MC4 LINE L1 7284 7910 -132 1731 171 3 13 chr20 34334876 34335180 -37818702 + AluJo SINE Alu 9 309 -3 311 261 61 35 chr20 34335181 34335296 -37818586 + L1MC5 LINE L1 7533 7650 -311 320 183 78 123 chr20 34335325 34335441 -37818441 + L1MC5 LINE L1 7640 7760 -201 2339 97 0 3 chr20 34335441 34335739 -37818143 - AluSg1 SINE Alu -12 297 1 320 183 78 123 chr20 34335739 34335822 -37818060 + L1MC5 LINE L1 7760 7845 -116 2410 92 3 0 chr20 34335822 34336126 -37817756 - AluSp SINE Alu -8 305 1 1550 169 41 69 chr20 34336128 34336447 -37817435 - AluJb SINE Alu -1 311 2 320 183 78 123 chr20 34336447 34336512 -37817370 + L1MC5 LINE L1 7846 7893 -68 2323 115 0 10 chr20 34336512 34336824 -37817058 - AluSx SINE Alu -3 309 1 320 183 78 123 chr20 34336824 34336862 -37817020 + L1MC5 LINE L1 7893 7931 -30 592 314 66 4 chr20 34336884 34337110 -37816772 + MIR SINE MIR 22 261 -1 2287 122 0 0 chr20 34337287 34337590 -37816292 + AluSx SINE Alu 1 303 -9 2110 104 38 10 chr20 34337590 34337878 -37816004 + AluSg SINE Alu 1 296 -14 286 182 0 15 chr20 34337878 34337944 -37815938 + L1MC4a LINE L1 4411 4475 -1671 628 128 0 0 chr20 34337955 34338041 -37815841 + FLAM_A SINE Alu 20 105 -37 815 254 61 11 chr20 34338513 34338792 -37815090 + L1MC4a LINE L1 5641 5933 -1875 545 276 201 0 chr20 34339230 34339404 -37814478 - MIR SINE MIR 0 262 54 1440 162 8 64 chr20 34339546 34339811 -37814071 - AluJb SINE Alu -14 298 49 2387 90 7 0 chr20 34339842 34340142 -37813740 + AluSp SINE Alu 1 302 -11 1991 106 0 4 chr20 34340148 34340404 -37813478 + AluSc SINE Alu 39 293 -16 2496 70 0 19 chr20 34340453 34340766 -37813116 + AluY SINE Alu 1 307 -4 674 250 14 0 chr20 34340890 34341034 -37812848 + AluJo SINE Alu 6 151 -161 21 0 0 0 chr20 34341514 34341535 -37812347 + AT_rich Low_complexity Low_complexity 1 21 0 1776 168 3 3 chr20 34342271 34342557 -37811325 + AluJb SINE Alu 9 294 -18 384 280 26 16 chr20 34342563 34342686 -37811196 - MIR SINE MIR -62 146 52 2071 122 21 3 chr20 34342757 34343043 -37810839 + AluSx SINE Alu 1 291 -21 1145 140 4 123 chr20 34344167 34344402 -37809480 - AluJb SINE Alu -14 298 92 336 24 0 0 chr20 34344402 34344443 -37809439 + (TG)n Simple_repeat Simple_repeat 1 41 0 230 65 0 0 chr20 34344443 34344474 -37809408 - Alu SINE Alu -182 120 90 264 59 0 0 chr20 34344474 34344508 -37809374 + (TG)n Simple_repeat Simple_repeat 2 35 0 236 62 0 0 chr20 34344551 34344583 -37809299 - Alu SINE Alu -182 120 89 638 194 0 40 chr20 34344593 34344717 -37809165 - AluJb SINE Alu -192 120 2 182 212 0 0 chr20 34345121 34345154 -37808728 + L2 LINE L2 3268 3300 -13 321 234 0 0 chr20 34345242 34345306 -37808576 - L2 LINE L2 -2 3270 3207 2074 123 34 0 chr20 34345825 34346117 -37807765 - AluSx SINE Alu -10 302 1 811 153 0 89 chr20 34346146 34346303 -37807579 + FLAM_C SINE Alu 1 143 0 257 163 225 0 chr20 34346303 34346383 -37807499 + L1M4 LINE L1 5179 5276 -870 2482 106 0 0 chr20 34346383 34346695 -37807187 + AluSx SINE Alu 1 312 0 185 300 0 20 chr20 34346897 34346947 -37806935 - L2 LINE L2 -25 3247 3199 1003 136 105 5 chr20 34346949 34347140 -37806742 - Tigger1 DNA MER2_type -1 2417 2208 1281 211 21 39 chr20 34347143 34347310 -37806572 - AluJo SINE Alu -30 282 120 2135 118 26 16 chr20 34347310 34347615 -37806267 + AluSg SINE Alu 1 308 -2 1281 211 21 39 chr20 34347615 34347726 -37806156 - AluJo SINE Alu -192 120 9 2873 97 0 83 chr20 34347726 34348210 -37805672 + Tigger1 DNA MER2_type 1255 1698 -720 748 80 0 0 chr20 34348216 34348316 -37805566 - Tigger1 DNA MER2_type -1238 1180 1081 743 186 0 0 chr20 34348318 34348436 -37805446 + FLAM_C SINE Alu 2 119 -24 6314 121 20 55 chr20 34348450 34348904 -37804978 - Tigger1 DNA MER2_type -1326 1092 624 2260 129 0 10 chr20 34348904 34349215 -37804667 - AluSx SINE Alu -4 308 1 6314 121 20 55 chr20 34349215 34349868 -37804014 - Tigger1 DNA MER2_type -1794 624 24 357 215 133 82 chr20 34349886 34350044 -37803838 - MIR SINE MIR -82 180 15 1239 169 24 127 chr20 34350222 34350553 -37803329 - AluYb8 SINE Alu -21 297 1 344 328 116 15 chr20 34351072 34351270 -37802612 + L1ME LINE L1 5585 5802 -319 259 230 118 22 chr20 34351270 34351405 -37802477 + L1MC5 LINE L1 7265 7412 -549 1539 142 106 4 chr20 34351490 34351736 -37802146 - AluJb SINE Alu -11 301 31 438 256 64 8 chr20 34351737 34351927 -37801955 + L1MC4 LINE L1 7643 7953 -89 2100 107 10 3 chr20 34351985 34352275 -37801607 + AluSg SINE Alu 1 292 -18 1121 181 68 106 chr20 34352319 34352676 -37801206 - L1MD3 LINE L1 -5 8037 7708 1991 132 3 7 chr20 34352676 34352992 -37800890 - AluSx SINE Alu 0 315 1 1121 181 68 106 chr20 34352992 34353082 -37800800 - L1MD3 LINE L1 -334 7708 7616 668 163 21 7 chr20 34353124 34353265 -37800617 + L1MD3 LINE L1 7713 7855 -140 644 185 0 0 chr20 34353265 34353384 -37800498 - FLAM_C SINE Alu -2 141 23 344 131 0 0 chr20 34353426 34353487 -37800395 + L1MD3 LINE L1 7934 7994 -1 2243 132 0 0 chr20 34353663 34353974 -37799908 + AluSq SINE Alu 1 311 -2 1017 167 0 0 chr20 34353980 34354163 -37799719 + AluSg/x SINE Alu 134 316 0 2188 104 3 41 chr20 34354163 34354448 -37799434 + AluSq SINE Alu 1 274 -39 198 0 0 0 chr20 34354448 34354470 -37799412 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 2188 104 3 41 chr20 34354470 34354502 -37799380 + AluSq SINE Alu 274 306 -7 514 232 62 108 chr20 34354504 34354589 -37799293 + L1MC5 LINE L1 7703 7790 -171 1843 94 15 49 chr20 34354589 34354722 -37799160 + AluSq SINE Alu 1 122 -191 2436 78 3 7 chr20 34354722 34355028 -37798854 + AluSp SINE Alu 1 305 -8 1843 94 15 49 chr20 34355028 34355159 -37798723 + AluSq SINE Alu 122 256 -57 514 232 62 108 chr20 34355159 34355314 -37798568 + L1MC5 LINE L1 7790 7932 -29 1923 167 3 3 chr20 34355893 34356198 -37797684 + AluJo SINE Alu 1 305 -7 372 297 165 24 chr20 34356525 34356737 -37797145 - MIR SINE MIR -13 249 8 2394 87 7 0 chr20 34357337 34357635 -37796247 - AluSc SINE Alu -9 300 1 766 209 35 55 chr20 34358026 34358227 -37795655 - MER58A DNA MER1_type 0 224 28 1823 155 38 14 chr20 34358256 34358547 -37795335 + AluJb SINE Alu 1 298 -14 2259 103 3 7 chr20 34359059 34359359 -37794523 + AluSp SINE Alu 1 299 -14 553 159 0 0 chr20 34359651 34359739 -37794143 + L1MB3 LINE L1 5682 5769 -414 521 77 26 0 chr20 34359780 34359858 -37794024 + (TCTCCC)n Simple_repeat Simple_repeat 4 83 0 6082 69 20 23 chr20 34359858 34361157 -37792725 + SVA Other Other 1 1047 -339 2095 128 28 33 chr20 34361228 34361270 -37792612 + L1MB3 LINE L1 5790 5831 -352 2055 133 13 3 chr20 34361270 34361572 -37792310 + AluJb SINE Alu 1 305 -7 2095 128 28 33 chr20 34361572 34361918 -37791964 + L1MB3 LINE L1 5831 6176 -7 1898 174 16 7 chr20 34362246 34362551 -37791331 + AluJo SINE Alu 1 308 -4 730 148 59 47 chr20 34362569 34362738 -37791144 + MER3 DNA MER1_type 30 200 -9 2168 87 56 0 chr20 34362818 34363105 -37790777 + AluSp SINE Alu 1 303 -10 188 261 76 33 chr20 34363186 34363278 -37790604 - MIR SINE MIR -12 250 155 1654 83 4 50 chr20 34363613 34363854 -37790028 - MER30 DNA MER1_type 0 230 1 2273 114 3 0 chr20 34364143 34364441 -37789441 - AluSg SINE Alu -11 299 1 647 206 80 17 chr20 34364446 34364621 -37789261 - AluJo SINE Alu -7 305 120 329 248 157 33 chr20 34365018 34365139 -37788743 + MIR SINE MIR 119 254 -8 2218 109 36 10 chr20 34365411 34365715 -37788167 - AluSx SINE Alu 0 312 1 844 192 0 6 chr20 34365734 34365890 -37787992 - FRAM SINE Alu -2 174 20 590 162 95 20 chr20 34365909 34366057 -37787825 - L1MB3 LINE L1 -41 6142 5984 1810 167 31 0 chr20 34366589 34366877 -37787005 + AluJo SINE Alu 1 297 -15 2304 92 20 3 chr20 34366994 34367297 -37786585 + AluSx SINE Alu 1 308 -4 1398 158 5 0 chr20 34367661 34367863 -37786019 - AluJb SINE Alu -109 203 1 693 228 114 35 chr20 34368367 34368569 -37785313 - MIR SINE MIR -4 258 41 663 310 80 5 chr20 34368632 34368845 -37785037 - MIR SINE MIR -32 230 2 2030 155 3 0 chr20 34368973 34369270 -37784612 + AluSq SINE Alu 1 298 -15 752 267 22 50 chr20 34369328 34369479 -37784403 + L1MC/D LINE L1 5549 5690 -2118 2022 137 7 3 chr20 34369479 34369772 -37784110 + AluSx SINE Alu 6 299 -13 752 267 22 50 chr20 34369772 34369897 -37783985 + L1MC/D LINE L1 5690 5817 -1991 2003 168 3 0 chr20 34369908 34370212 -37783670 + AluJo SINE Alu 1 305 -7 246 311 139 87 chr20 34370502 34370868 -37783014 + L2 LINE L2 2861 3245 -27 1624 163 55 76 chr20 34370874 34371013 -37782869 - MER1B DNA MER1_type -2373 337 197 1676 151 3 74 chr20 34371013 34371324 -37782558 + AluJb SINE Alu 7 295 -17 1624 163 55 76 chr20 34371324 34371528 -37782354 - MER1B DNA MER1_type -2513 197 1 389 269 105 24 chr20 34371633 34371846 -37782036 + MIR SINE MIR 18 250 -12 1349 110 0 6 chr20 34371909 34372091 -37781791 + AluSg/x SINE Alu 114 294 -18 361 275 198 6 chr20 34372091 34372258 -37781624 + MIR SINE MIR 24 222 -40 699 315 16 20 chr20 34372338 34372589 -37781293 - MIR SINE MIR -10 252 3 509 165 32 205 chr20 34372887 34373201 -37780681 + MER33 DNA MER1_type 14 254 -2331 1451 144 4 32 chr20 34373201 34373451 -37780431 - AluJb SINE Alu -69 243 1 509 165 32 205 chr20 34373451 34373512 -37780370 + MER33 DNA MER1_type 254 324 0 929 271 115 34 chr20 34373514 34374009 -37779873 + L2 LINE L2 2217 2751 -563 2003 158 0 3 chr20 34374010 34374313 -37779569 + AluJb SINE Alu 1 302 -10 2436 89 0 16 chr20 34374314 34374627 -37779255 + AluSg SINE Alu 1 308 -2 214 314 29 0 chr20 34374655 34374725 -37779157 + L2 LINE L2 2750 2821 -493 2141 108 7 14 chr20 34374728 34375023 -37778859 - AluSx SINE Alu -19 293 1 923 136 15 0 chr20 34375024 34375156 -37778726 - AluSq/x SINE Alu -178 134 1 1249 126 0 0 chr20 34375304 34375471 -37778411 - AluSg/x SINE Alu -6 304 138 1015 262 128 9 chr20 34375472 34375816 -37778066 + L2 LINE L2 2929 3313 0 986 173 26 58 chr20 34375826 34375868 -37778014 - LTR16C LTR ERVL 0 491 449 2256 112 0 0 chr20 34375868 34376162 -37777720 - AluSx SINE Alu -18 294 1 986 173 26 58 chr20 34376162 34376345 -37777537 - LTR16C LTR ERVL -42 449 273 1846 187 124 21 chr20 34376345 34376779 -37777103 + MLT2B1 LTR ERVL 1 479 -41 1873 157 0 17 chr20 34376787 34376924 -37776958 + AluJb SINE Alu 1 139 -173 1750 142 30 17 chr20 34376924 34377226 -37776656 + AluSx SINE Alu 1 306 -6 1873 157 0 17 chr20 34377226 34377387 -37776495 + AluJb SINE Alu 139 294 -18 1180 145 0 0 chr20 34377586 34377752 -37776130 - AluSg/x SINE Alu -16 296 131 2365 106 0 3 chr20 34377756 34378067 -37775815 - AluSx SINE Alu -1 311 2 1795 103 60 4 chr20 34378157 34378409 -37775473 + AluSx SINE Alu 29 294 -18 3033 157 71 15 chr20 34378560 34379094 -37774788 + MLT1F1 LTR MaLR 4 567 0 461 173 244 31 chr20 34380476 34380603 -37773279 + MER53 DNA DNA 36 189 0 1700 147 0 15 chr20 34380734 34380895 -37772987 - AluSx SINE Alu -19 293 136 2226 103 20 0 chr20 34380895 34381197 -37772685 - AluSx SINE Alu -4 308 1 1700 147 0 15 chr20 34381197 34381294 -37772588 - AluSx SINE Alu -176 136 39 1409 244 109 9 chr20 34381754 34382176 -37771706 + L2 LINE L2 2839 3302 -11 234 170 38 132 chr20 34382257 34382363 -37771519 + MIR SINE MIR 23 118 -90 702 314 122 29 chr20 34382547 34383296 -37770586 + L2 LINE L2 2352 3182 -90 431 175 91 71 chr20 34383344 34383498 -37770384 - MIR3 SINE MIR -11 197 41 2002 117 57 0 chr20 34384278 34384559 -37769323 - AluSg SINE Alu -13 297 1 1038 104 0 0 chr20 34384561 34384695 -37769187 - AluSq/x SINE Alu -179 134 1 1743 162 3 42 chr20 34384912 34385221 -37768661 + AluJo SINE Alu 1 297 -15 2489 84 3 7 chr20 34385227 34385537 -37768345 + AluSp SINE Alu 5 313 0 1940 153 0 10 chr20 34385577 34385878 -37768004 + AluSx SINE Alu 1 298 -14 493 297 41 41 chr20 34385964 34386230 -37767652 + MLT1J LTR MaLR 239 504 -7 363 356 6 6 chr20 34386378 34386538 -37767344 + (CA)n Simple_repeat Simple_repeat 2 161 0 1085 164 24 53 chr20 34386639 34386765 -37767117 + AluSg SINE Alu 1 120 -190 2057 112 10 41 chr20 34386765 34387079 -37766803 + AluSx SINE Alu 1 304 -8 1085 164 24 53 chr20 34387079 34387159 -37766723 + AluSg SINE Alu 120 201 -109 2124 115 7 0 chr20 34387099 34387387 -37766495 + AluSq SINE Alu 9 298 -15 620 247 53 68 chr20 34387714 34387787 -37766095 + MIR SINE MIR 68 141 -121 2038 113 0 28 chr20 34387787 34387923 -37765959 + AluSx SINE Alu 1 139 -170 2214 112 10 3 chr20 34387923 34388227 -37765655 + AluSx SINE Alu 1 306 -6 2038 113 0 28 chr20 34388227 34388407 -37765475 + AluSx SINE Alu 139 309 0 620 247 53 68 chr20 34388407 34388522 -37765360 + MIR SINE MIR 141 254 -8 243 284 32 11 chr20 34388626 34388721 -37765161 - MIR3 SINE MIR -22 186 90 201 226 75 0 chr20 34388851 34388904 -37764978 - L2 LINE L2 -18 3295 3239 445 183 0 0 chr20 34389451 34389522 -37764360 + MLT1J LTR MaLR 78 148 -363 1242 174 64 0 chr20 34389522 34389741 -37764141 - AluJb SINE Alu -11 301 69 2390 106 0 0 chr20 34389776 34390077 -37763805 + AluSx SINE Alu 1 301 -11 1939 142 28 3 chr20 34390085 34390373 -37763509 + AluSx SINE Alu 1 295 -17 794 252 112 28 chr20 34390906 34391174 -37762708 + MLT1L LTR MaLR 27 271 -344 2382 109 0 0 chr20 34391174 34391478 -37762404 - AluSx SINE Alu -8 304 1 794 252 112 28 chr20 34391478 34391698 -37762184 + MLT1L LTR MaLR 271 615 0 2285 115 0 13 chr20 34391952 34392266 -37761616 + AluSx SINE Alu 1 310 -2 1162 180 0 0 chr20 34392273 34392456 -37761426 + AluJb SINE Alu 129 311 -1 463 244 8 38 chr20 34392465 34392585 -37761297 + MIR SINE MIR 31 148 -114 2360 106 3 3 chr20 34392585 34392897 -37760985 + AluSp SINE Alu 1 312 -1 2214 130 0 3 chr20 34392929 34393237 -37760645 + AluJo SINE Alu 1 307 -5 2476 82 3 3 chr20 34393416 34393722 -37760160 + AluSc SINE Alu 2 307 -2 1408 160 102 51 chr20 34393753 34394028 -37759854 + AluJb SINE Alu 1 289 -23 380 315 84 29 chr20 34394129 34394367 -37759515 + L2 LINE L2 3012 3262 -10 352 264 18 98 chr20 34395137 34395288 -37758594 + L2 LINE L2 3131 3270 -43 2412 103 3 0 chr20 34395288 34395600 -37758282 + AluSp SINE Alu 1 313 0 352 264 18 98 chr20 34395600 34395611 -37758271 + L2 LINE L2 3270 3280 -33 1393 138 21 129 chr20 34395647 34395785 -37758097 + AluJo SINE Alu 1 152 -150 1683 182 11 4 chr20 34395785 34396060 -37757822 - AluJb SINE Alu -26 286 10 1393 138 21 129 chr20 34396060 34396095 -37757787 + AluJo SINE Alu 152 189 -113 2276 92 0 7 chr20 34396095 34396388 -37757494 + AluSc SINE Alu 1 291 -18 1393 138 21 129 chr20 34396388 34396539 -37757343 + AluJo SINE Alu 189 291 -11 1897 170 0 7 chr20 34396638 34396944 -37756938 + AluJb SINE Alu 1 304 -8 347 198 19 66 chr20 34396975 34397050 -37756832 + MIR SINE MIR 72 142 -120 2088 121 0 55 chr20 34397050 34397380 -37756502 + AluSx SINE Alu 1 312 0 347 198 19 66 chr20 34397380 34397410 -37756472 + MIR SINE MIR 142 172 -90 2403 86 0 7 chr20 34397427 34397728 -37756154 + AluSx SINE Alu 1 299 -13 2295 103 30 0 chr20 34397740 34398040 -37755842 + AluSx SINE Alu 1 309 -3 2026 143 17 3 chr20 34398047 34398341 -37755541 + AluJb SINE Alu 3 300 -12 21 0 0 0 chr20 34398344 34398365 -37755517 + AT_rich Low_complexity Low_complexity 1 21 0 260 272 160 8 chr20 34398469 34398594 -37755288 + MIR SINE MIR 1 144 -118 229 327 118 13 chr20 34398873 34399026 -37754856 + L1MC/D LINE L1 5591 5759 -2049 418 208 17 50 chr20 34399041 34399161 -37754721 + L2 LINE L2 3156 3271 -1 921 189 6 0 chr20 34399174 34399333 -37754549 - FAM SINE Alu -9 40 1 2104 130 0 31 chr20 34399385 34399707 -37754175 + AluJb SINE Alu 1 312 0 921 188 7 7 chr20 34399841 34399995 -37753887 - FRAM SINE Alu -18 158 5 24 0 0 0 chr20 34400054 34400078 -37753804 + AT_rich Low_complexity Low_complexity 1 24 0 1745 163 3 37 chr20 34400233 34400413 -37753469 - AluJo SINE Alu -16 296 111 2013 156 10 0 chr20 34400413 34400721 -37753161 + AluSx SINE Alu 1 311 -1 2066 111 76 0 chr20 34400724 34401012 -37752870 + AluSp SINE Alu 1 310 -3 1745 163 3 37 chr20 34401012 34401122 -37752760 - AluJo SINE Alu -203 109 12 1363 155 0 19 chr20 34401122 34401335 -37752547 - AluJb SINE Alu -17 295 87 2330 88 44 0 chr20 34401635 34401930 -37751952 - AluSx SINE Alu -4 308 1 2351 95 0 3 chr20 34402020 34402315 -37751567 + AluSx SINE Alu 2 295 -17 1922 147 3 14 chr20 34402329 34402614 -37751268 + AluJb SINE Alu 1 282 -30 555 230 120 11 chr20 34402663 34402819 -37751063 + MIR SINE MIR 32 214 -48 2490 71 0 3 chr20 34402819 34403116 -37750766 + AluSx SINE Alu 1 296 -16 555 230 120 11 chr20 34403116 34403150 -37750732 + MIR SINE MIR 214 243 -19 263 349 56 8 chr20 34403818 34403944 -37749938 - L2 LINE L2 -6 3307 3176 1405 190 77 0 chr20 34403950 34404224 -37749658 + AluJo SINE Alu 4 298 -14 2281 116 0 0 chr20 34404289 34404583 -37749299 - AluSx SINE Alu -18 294 1 2354 100 0 10 chr20 34404611 34404920 -37748962 - AluSq SINE Alu -7 306 1 366 263 53 9 chr20 34405920 34406034 -37747848 - MER117 DNA MER1_type -29 168 50 842 144 0 15 chr20 34406055 34406187 -37747695 - FLAM_C SINE Alu 0 133 4 251 282 82 18 chr20 34406218 34406328 -37747554 - MIR3 SINE MIR -44 164 48 2434 81 7 7 chr20 34406335 34406643 -37747239 - AluSx SINE Alu -4 308 1 2051 115 21 3 chr20 34406667 34406954 -37746928 + AluSx SINE Alu 1 292 -20 189 321 99 8 chr20 34406977 34407108 -37746774 + L2 LINE L2 3169 3311 -2 2543 65 3 0 chr20 34407264 34407572 -37746310 + AluY SINE Alu 1 309 -2 1853 153 43 13 chr20 34407911 34408032 -37745850 + AluJb SINE Alu 1 117 -195 2435 76 7 16 chr20 34408032 34408335 -37745547 + AluSg SINE Alu 1 300 -10 2328 105 0 0 chr20 34408335 34408629 -37745253 + AluSg SINE Alu 1 295 -15 1853 153 43 13 chr20 34408629 34408807 -37745075 + AluJb SINE Alu 116 310 -2 190 54 27 27 chr20 34408859 34408896 -37744986 + (TTTTA)n Simple_repeat Simple_repeat 5 41 0 192 319 0 0 chr20 34409211 34409283 -37744599 - MIR SINE MIR -71 137 66 2185 148 3 0 chr20 34409372 34409676 -37744206 + AluSx SINE Alu 3 307 -5 500 304 24 1 chr20 34409863 34410038 -37743844 - MIR SINE MIR -58 150 3 1801 146 45 0 chr20 34410582 34410849 -37743033 + AluJb SINE Alu 10 288 -24 348 74 0 0 chr20 34410993 34411047 -37742835 + L1MA3 LINE L1 6252 6305 0 1996 129 0 71 chr20 34411056 34411189 -37742693 + AluSx SINE Alu 3 144 -168 2308 107 3 16 chr20 34411189 34411506 -37742376 + AluSq SINE Alu 1 313 0 1996 129 0 71 chr20 34411506 34411525 -37742357 + AluSx SINE Alu 144 163 -149 2231 110 3 7 chr20 34411525 34411848 -37742034 + AluSq SINE Alu 1 313 0 1996 129 0 71 chr20 34411848 34412020 -37741862 + AluSx SINE Alu 163 305 -7 1077 152 12 0 chr20 34412020 34412184 -37741698 + AluSg/x SINE Alu 132 297 -13 662 304 74 0 chr20 34412441 34412671 -37741211 - MIR SINE MIR 0 262 16 391 229 50 43 chr20 34412691 34412831 -37741051 - MIR3 SINE MIR -34 174 34 333 229 127 0 chr20 34413094 34413212 -37740670 + MIR3 SINE MIR 75 207 -1 542 288 45 6 chr20 34413392 34413569 -37740313 + MIR SINE MIR 51 234 -28 231 260 180 0 chr20 34413920 34414020 -37739862 - MIR SINE MIR -111 151 34 25 31 0 0 chr20 34414746 34414778 -37739104 + GC_rich Low_complexity Low_complexity 1 32 0 25 31 0 0 chr20 34414896 34414928 -37738954 + GC_rich Low_complexity Low_complexity 1 32 0 912 144 72 0 chr20 34415548 34415701 -37738181 + AluJb SINE Alu 138 301 -11 540 229 18 29 chr20 34416079 34416256 -37737626 + MIR SINE MIR 30 203 -59 642 191 95 0 chr20 34416390 34416516 -37737366 + AluJb SINE Alu 136 273 -39 385 256 73 22 chr20 34416525 34416662 -37737220 - MIR SINE MIR -115 147 4 2367 94 0 25 chr20 34416877 34417195 -37736687 + AluSg SINE Alu 1 310 0 1369 186 57 0 chr20 34417285 34417532 -37736350 + AluJo SINE Alu 40 300 -12 200 118 0 29 chr20 34417537 34417571 -37736311 + (GGAA)n Simple_repeat Simple_repeat 4 36 0 247 245 0 0 chr20 34418009 34418062 -37735820 + (TG)n Simple_repeat Simple_repeat 1 53 0 1290 146 5 5 chr20 34418338 34418537 -37735345 + AluSx SINE Alu 1 199 -113 480 59 15 0 chr20 34418537 34418605 -37735277 + AluSc SINE Alu 65 133 -176 2414 71 3 10 chr20 34418606 34418902 -37734980 + AluY SINE Alu 1 294 -17 1565 114 0 0 chr20 34419091 34419301 -37734581 - AluSq SINE Alu 0 313 104 1431 115 0 10 chr20 34419305 34419505 -37734377 + AluSg/x SINE Alu 100 297 -13 910 90 0 0 chr20 34419506 34419617 -37734265 - AluSq SINE Alu -201 111 1 2245 123 3 0 chr20 34419638 34419938 -37733944 - AluSx SINE Alu -11 301 1 506 259 39 15 chr20 34420010 34420215 -37733667 - L1MEd LINE L1 -5003 1116 907 2375 92 0 48 chr20 34420216 34420395 -37733487 - AluSg SINE Alu -9 301 115 219 36 0 0 chr20 34420395 34420423 -37733459 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 2161 107 0 4 chr20 34420423 34420703 -37733179 - AluSg SINE Alu -31 279 1 2375 92 0 48 chr20 34420703 34420838 -37733044 - AluSg SINE Alu -193 117 1 2247 80 0 10 chr20 34420880 34421168 -37732714 - AluSx SINE Alu -17 295 11 2295 119 0 3 chr20 34421281 34421592 -37732290 - AluSx SINE Alu -2 310 1 501 154 9 45 chr20 34421592 34421691 -37732191 - AluJo/FRAM SINE Alu -17 295 199 1553 175 90 65 chr20 34421691 34421908 -37731974 - MER66A LTR ERV1 -9 469 333 2020 128 31 7 chr20 34421908 34422196 -37731686 - AluSx SINE Alu -17 295 1 1553 175 90 65 chr20 34422196 34422436 -37731446 - MER66A LTR ERV1 -145 333 100 466 121 0 0 chr20 34422521 34422587 -37731295 - AluJ/FLAM SINE Alu -233 79 14 2525 67 0 0 chr20 34422658 34422956 -37730926 + AluY SINE Alu 1 298 -13 835 136 0 0 chr20 34422977 34423095 -37730787 - FLAM_C SINE Alu -25 118 1 256 26 53 0 chr20 34423102 34423140 -37730742 - MER41A LTR ERV1 -114 440 401 496 282 69 111 chr20 34423200 34423304 -37730578 - L1MEd LINE L1 -5460 659 552 2224 112 0 0 chr20 34423304 34423591 -37730291 + AluSg SINE Alu 1 287 -23 496 282 69 111 chr20 34423591 34423615 -37730267 - L1MEd LINE L1 -5567 552 529 2161 116 3 0 chr20 34423615 34423920 -37729962 + AluSq SINE Alu 1 306 0 496 282 69 111 chr20 34423920 34424082 -37729800 - L1MEd LINE L1 -5590 529 388 2295 124 3 0 chr20 34424082 34424388 -37729494 - AluSx SINE Alu -5 307 1 496 282 69 111 chr20 34424388 34424526 -37729356 - L1MEd LINE L1 -5731 388 246 2170 117 0 26 chr20 34424531 34424839 -37729043 + AluSg SINE Alu 1 300 -10 2443 74 0 3 chr20 34424839 34425135 -37728747 + AluY SINE Alu 1 295 -16 1995 155 3 10 chr20 34425147 34425451 -37728431 + AluSx SINE Alu 1 302 -10 839 200 0 32 chr20 34425488 34425673 -37728209 + AluJo SINE Alu 120 298 -14 2521 68 0 0 chr20 34425677 34425973 -37727909 + AluY SINE Alu 1 296 -15 2218 97 14 3 chr20 34425976 34426266 -37727616 + AluSx SINE Alu 1 293 -19 239 303 62 22 chr20 34426399 34426577 -37727305 - L2 LINE L2 -1065 2249 2065 2157 108 13 16 chr20 34426777 34427084 -37726798 + AluSq SINE Alu 3 308 -5 1451 123 9 0 chr20 34427243 34427454 -37726428 - AluSg SINE Alu -95 215 3 249 26 0 0 chr20 34427463 34427502 -37726380 - Alu SINE Alu 0 302 264 1659 179 47 3 chr20 34427502 34427799 -37726083 - AluJb SINE Alu -1 311 2 1005 215 13 18 chr20 34428160 34428324 -37725558 - AluJo SINE Alu 0 312 148 2414 92 7 0 chr20 34428324 34428628 -37725254 - AluSx SINE Alu -6 306 1 1005 215 13 18 chr20 34428628 34428691 -37725191 - AluJo SINE Alu -164 148 86 825 135 0 0 chr20 34428886 34428997 -37724885 + AluSq/x SINE Alu 5 115 -198 2129 90 0 14 chr20 34428998 34429132 -37724750 + AluSc SINE Alu 1 135 -174 2581 46 0 13 chr20 34429132 34429436 -37724446 + AluY SINE Alu 1 300 -11 2129 90 0 14 chr20 34429436 34429578 -37724304 + AluSc SINE Alu 135 273 -36 258 210 16 0 chr20 34429579 34429641 -37724241 - AluSp/q SINE Alu -8 295 233 1818 85 0 8 chr20 34429741 34429976 -37723906 - AluSg1 SINE Alu -76 233 1 2224 101 17 3 chr20 34429978 34430265 -37723617 - AluSx SINE Alu -21 291 1 356 302 17 34 chr20 34430291 34430428 -37723454 + MIR SINE MIR 19 152 -62 202 288 91 0 chr20 34430615 34430681 -37723201 - L2 LINE L2 -6 3307 3236 1558 208 20 3 chr20 34431049 34431180 -37722702 + AluJb SINE Alu 5 132 -180 2369 88 3 13 chr20 34431180 34431486 -37722396 + AluSx SINE Alu 1 303 -9 1558 208 20 3 chr20 34431486 34431652 -37722230 + AluJb SINE Alu 132 307 -5 1125 149 11 21 chr20 34432070 34432258 -37721624 + AluJb SINE Alu 110 295 -17 351 269 58 0 chr20 34432260 34432364 -37721518 + MIR SINE MIR 81 190 -72 1064 82 15 0 chr20 34432372 34432507 -37721375 + AluSx SINE Alu 1 137 -175 2498 72 0 13 chr20 34432507 34432814 -37721068 + AluY SINE Alu 1 303 -8 2267 121 0 0 chr20 34432817 34433124 -37720758 + AluSg SINE Alu 1 307 -3 181 340 38 0 chr20 34433142 34433195 -37720687 + L2 LINE L2 3210 3264 -8 674 225 49 2 chr20 34433294 34433477 -37720405 + MIR SINE MIR 4 192 -50 210 231 0 0 chr20 34433509 34433548 -37720334 + (CTA)n Simple_repeat Simple_repeat 2 40 0 1076 116 0 0 chr20 34433702 34433848 -37720034 + AluSx SINE Alu 141 286 -26 584 244 23 0 chr20 34433857 34433988 -37719894 - MER5A DNA MER1_type -55 134 1 216 67 0 0 chr20 34434241 34434271 -37719611 + (CA)n Simple_repeat Simple_repeat 2 31 0 1821 170 0 0 chr20 34434771 34435053 -37718829 + AluJb SINE Alu 1 282 -30 2172 143 0 0 chr20 34435053 34435353 -37718529 - AluSx SINE Alu -12 300 1 1907 140 16 29 chr20 34435384 34435691 -37718191 + AluSq SINE Alu 1 303 -10 2046 111 4 0 chr20 34435691 34435961 -37717921 + AluY SINE Alu 1 272 -39 452 133 12 0 chr20 34435961 34436044 -37717838 + GA-rich Low_complexity Low_complexity 1 84 0 474 18 0 0 chr20 34436044 34436099 -37717783 + (GGAA)n Simple_repeat Simple_repeat 1 55 0 339 306 148 14 chr20 34436132 34436348 -37717534 - MIR SINE MIR -16 246 2 281 321 121 0 chr20 34437151 34437316 -37716566 + L1MC/D LINE L1 5587 5771 -2037 237 327 0 67 chr20 34437366 34437470 -37716412 + MER110A LTR ERV1 74 170 -298 2301 95 14 0 chr20 34437595 34437891 -37715991 - AluSx SINE Alu -12 300 1 1320 157 0 14 chr20 34437893 34438103 -37715779 - AluJo SINE Alu -19 293 87 1847 140 53 0 chr20 34438112 34438397 -37715485 - AluSp SINE Alu -13 300 1 2328 103 0 10 chr20 34438414 34438725 -37715157 - AluSx SINE Alu -4 308 1 1391 119 10 5 chr20 34438838 34439040 -37714842 + AluSq SINE Alu 33 235 -78 2207 121 3 0 chr20 34439081 34439370 -37714512 + AluSx SINE Alu 7 296 -16 1506 149 4 4 chr20 34439384 34439612 -37714270 + AluSx SINE Alu 14 241 -71 2256 119 7 0 chr20 34439636 34439938 -37713944 + AluSx SINE Alu 5 308 -4 2116 102 10 3 chr20 34439938 34440231 -37713651 + AluSq SINE Alu 1 295 -18 279 79 0 0 chr20 34440231 34440269 -37713613 + (TA)n Simple_repeat Simple_repeat 2 39 0 327 259 163 30 chr20 34440470 34440553 -37713329 - MIR SINE MIR 0 262 191 1464 153 127 8 chr20 34440553 34440821 -37713061 - AluSg SINE Alu -10 300 1 327 259 163 30 chr20 34440821 34440903 -37712979 - MIR SINE MIR -71 191 75 581 210 59 0 chr20 34441343 34441462 -37712420 + AluJo SINE Alu 117 242 -70 429 241 134 43 chr20 34441663 34441850 -37712032 - MIR SINE MIR 0 262 59 1666 199 22 22 chr20 34442042 34442353 -37711529 + AluJo SINE Alu 1 311 -1 2297 120 3 0 chr20 34442609 34442918 -37710964 - AluSg SINE Alu 0 310 1 1706 97 0 44 chr20 34442923 34443171 -37710711 - AluSc SINE Alu 0 309 73 1355 146 0 10 chr20 34443353 34443558 -37710324 + AluSg/x SINE Alu 80 282 -30 842 161 40 81 chr20 34443605 34443631 -37710251 - FAM SINE Alu -141 170 144 2175 141 0 0 chr20 34443631 34443929 -37709953 + AluSx SINE Alu 1 298 -14 842 161 40 81 chr20 34443929 34444076 -37709806 - FAM SINE Alu -167 144 4 488 265 230 20 chr20 34444335 34444539 -37709343 + L2 LINE L2 2973 3219 -94 1112 115 0 19 chr20 34444539 34444696 -37709186 - FRAM SINE Alu -7 169 16 23 0 0 0 chr20 34444702 34444725 -37709157 + AT_rich Low_complexity Low_complexity 1 23 0 1979 138 0 3 chr20 34444728 34445043 -37708839 + AluSx SINE Alu 1 314 0 260 272 98 132 chr20 34445252 34445403 -37708479 + L2 LINE L2 2996 3134 -138 1669 201 0 0 chr20 34445403 34445686 -37708196 - AluJb SINE Alu -23 289 7 260 272 98 132 chr20 34445686 34445821 -37708061 + L2 LINE L2 3134 3272 0 2015 156 3 3 chr20 34445998 34446306 -37707576 + AluSx SINE Alu 1 308 -4 311 182 23 45 chr20 34446390 34446478 -37707404 - MER58 DNA MER1_type -2194 226 141 350 304 17 9 chr20 34446578 34446693 -37707189 + MIR SINE MIR 84 199 -63 260 305 247 0 chr20 34447392 34447546 -37706336 + MIR SINE MIR 71 262 0 2012 123 26 32 chr20 34447586 34447720 -37706162 + AluSg SINE Alu 1 134 -176 2472 80 6 10 chr20 34447720 34448033 -37705849 + AluSq SINE Alu 1 312 -1 2012 123 26 32 chr20 34448033 34448208 -37705674 + AluSg SINE Alu 134 308 -2 813 184 162 0 chr20 34448210 34448389 -37705493 - MER3 DNA MER1_type -1 208 1 340 203 0 13 chr20 34448513 34448592 -37705290 - Tigger7 DNA MER2_type -7 2480 2403 1105 295 127 34 chr20 34449134 34449548 -37704334 + L2 LINE L2 2325 2699 -614 1702 170 35 14 chr20 34449548 34449677 -37704205 + AluJo SINE Alu 1 126 -186 2402 92 0 0 chr20 34449677 34449972 -37703910 + AluSg SINE Alu 1 295 -15 1702 170 35 14 chr20 34449972 34450125 -37703757 + AluJo SINE Alu 126 289 -23 1105 295 127 34 chr20 34450125 34450390 -37703492 + L2 LINE L2 2699 2938 -375 2507 76 3 0 chr20 34450390 34450693 -37703189 + AluSx SINE Alu 1 304 -8 1105 295 127 34 chr20 34450693 34450893 -37702989 + L2 LINE L2 2938 3286 -27 194 325 171 0 chr20 34450919 34451042 -37702840 - MIR SINE MIR -29 233 90 183 311 83 30 chr20 34451498 34451529 -37702353 - L2 LINE L2 -435 2879 2851 2271 116 0 7 chr20 34451529 34451831 -37702051 + AluSq SINE Alu 1 300 -13 183 311 83 30 chr20 34451831 34451931 -37701951 - L2 LINE L2 -463 2851 2741 1915 143 7 0 chr20 34451947 34452258 -37701624 - AluSx SINE Alu 0 313 1 2337 105 7 0 chr20 34452258 34452564 -37701318 - AluSx SINE Alu -4 308 1 1873 133 25 11 chr20 34452593 34452924 -37700958 + AluSx SINE Alu 1 335 0 566 165 0 0 chr20 34453024 34453115 -37700767 - AluJ/FRAM SINE Alu -3 309 219 703 144 10 0 chr20 34453121 34453225 -37700657 - FLAM_C SINE Alu -30 113 9 2056 108 56 0 chr20 34453505 34453793 -37700089 + AluSp SINE Alu 2 305 -8 1829 118 38 38 chr20 34454535 34454824 -37699058 + AluSx SINE Alu 1 289 -23 2010 135 3 23 chr20 34454826 34455129 -37698753 + AluSx SINE Alu 1 297 -15 286 294 0 0 chr20 34455133 34455225 -37698657 - L1M4 LINE L1 -2313 3833 3742 2089 100 0 17 chr20 34455226 34455405 -37698477 - AluSc SINE Alu -1 308 134 2313 100 3 10 chr20 34455405 34455706 -37698176 - AluSq SINE Alu -14 299 1 2089 100 0 17 chr20 34455706 34455817 -37698065 - AluSc SINE Alu -175 134 23 914 173 0 0 chr20 34455835 34455974 -37697908 - AluJo SINE Alu -173 139 1 1764 189 3 17 chr20 34455989 34456285 -37697597 - AluJb SINE Alu -20 292 1 303 219 27 96 chr20 34456285 34456353 -37697529 - L1M4 LINE L1 -2662 3484 3430 2579 61 0 7 chr20 34456353 34456663 -37697219 - AluY SINE Alu -3 308 1 303 219 27 96 chr20 34456663 34456740 -37697142 - L1M4 LINE L1 -2716 3430 3349 747 72 62 0 chr20 34456741 34456838 -37697044 - AluSg SINE Alu -14 298 196 2448 92 3 0 chr20 34456838 34457143 -37696739 - AluSp SINE Alu -6 307 2 1535 107 0 0 chr20 34457144 34457340 -37696542 - AluSg SINE Alu -114 196 1 681 209 47 64 chr20 34457370 34457485 -37696397 + AluJo SINE Alu 2 115 -197 189 0 0 0 chr20 34457485 34457506 -37696376 + (CTA)n Simple_repeat Simple_repeat 1 21 0 681 209 47 64 chr20 34457506 34457562 -37696320 + AluJo SINE Alu 115 170 -142 2451 69 0 20 chr20 34457564 34457889 -37695993 - AluY SINE Alu 0 311 1 2129 118 11 0 chr20 34457897 34458184 -37695698 - AluSx SINE Alu -22 290 1 1411 128 0 5 chr20 34458199 34458403 -37695479 - AluJo SINE Alu -23 289 87 2168 110 31 0 chr20 34458638 34458928 -37694954 - AluSp SINE Alu -14 299 1 2230 134 0 0 chr20 34458952 34459258 -37694624 - AluSx SINE Alu -6 306 1 1554 177 0 71 chr20 34459288 34459610 -37694272 - AluJb SINE Alu -13 299 1 2071 128 3 32 chr20 34459718 34459891 -37693991 - AluSq SINE Alu -9 304 128 216 0 0 0 chr20 34459891 34459915 -37693967 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1915 128 4 0 chr20 34459915 34460196 -37693686 - AluSg SINE Alu -28 282 1 2009 96 6 57 chr20 34460196 34460510 -37693372 - AluSq SINE Alu -15 298 1 2071 128 3 32 chr20 34460510 34460647 -37693235 - AluSq SINE Alu -182 131 1 604 134 210 17 chr20 34460652 34460771 -37693111 - FLAM_C SINE Alu 0 143 2 191 100 0 25 chr20 34461197 34461237 -37692645 + (CGGGG)n Simple_repeat Simple_repeat 5 43 0 252 143 0 0 chr20 34461241 34461283 -37692599 + (CGG)n Simple_repeat Simple_repeat 1 42 0 25 0 0 0 chr20 34461389 34461414 -37692468 + GC_rich Low_complexity Low_complexity 1 25 0 393 263 137 26 chr20 34461864 34462054 -37691828 + MIR SINE MIR 22 232 -30 223 327 47 33 chr20 34462367 34462517 -37691365 - L2 LINE L2 -3 3310 3159 * 256 220 46 64 chr20 34462513 34462622 -37691260 - MIR SINE MIR -49 213 107 2216 116 0 23 chr20 34462860 34463021 -37690861 - AluSx SINE Alu -18 294 131 180 0 0 0 chr20 34463021 34463041 -37690841 + (TTTTA)n Simple_repeat Simple_repeat 4 23 0 2128 106 7 10 chr20 34463042 34463334 -37690548 - AluSq SINE Alu -22 291 1 2216 116 0 23 chr20 34463334 34463471 -37690411 - AluSx SINE Alu -180 132 1 373 147 15 0 chr20 34463500 34463568 -37690314 + MER41A LTR ERV1 398 466 -88 1831 162 20 0 chr20 34463661 34463963 -37689919 - AluJo SINE Alu -4 308 1 1139 122 50 22 chr20 34464024 34464205 -37689677 - AluSq SINE Alu -127 186 1 2379 112 0 0 chr20 34464215 34464528 -37689354 - AluSq SINE Alu 0 313 1 1247 205 26 33 chr20 34464650 34464953 -37688929 - AluJo SINE Alu -11 301 1 1996 142 10 6 chr20 34465022 34465333 -37688549 - AluSq SINE Alu -1 312 1 336 48 0 0 chr20 34465385 34465427 -37688455 + (TA)n Simple_repeat Simple_repeat 2 43 0 2685 46 0 0 chr20 34465427 34465733 -37688149 - AluY SINE Alu -5 306 1 2247 90 11 0 chr20 34465744 34466050 -37687832 - AluSp SINE Alu 0 309 1 272 250 12 25 chr20 34466097 34466177 -37687705 - Charlie7 DNA MER1_type -2507 105 27 1958 121 45 3 chr20 34466268 34466558 -37687324 + AluSq SINE Alu 1 302 -11 2128 97 10 27 chr20 34466558 34466858 -37687024 + AluSg SINE Alu 1 295 -15 674 241 44 49 chr20 34466898 34467101 -37686781 + MIR SINE MIR 30 231 -31 205 322 40 84 chr20 34467150 34467352 -37686530 - L2 LINE L2 -112 3160 2968 515 233 0 35 chr20 34467926 34468042 -37685840 + LTR33 LTR ERVL 6 117 -404 2464 93 3 0 chr20 34468144 34468454 -37685428 + AluSp SINE Alu 1 311 -2 419 243 28 28 chr20 34468538 34468682 -37685200 + LTR33 LTR ERVL 373 516 -5 2363 97 0 0 chr20 34468700 34469000 -37684882 - AluSc SINE Alu -9 300 1 690 233 0 0 chr20 34469001 34469134 -37684748 - AluJb SINE Alu -178 134 2 954 136 0 7 chr20 34469244 34469384 -37684498 - AluJb SINE Alu -173 139 1 2220 105 0 19 chr20 34469391 34469705 -37684177 - AluSq SINE Alu -5 308 1 968 120 60 0 chr20 34469762 34469912 -37683970 + FRAM SINE Alu 8 166 -10 2319 105 3 3 chr20 34469913 34470218 -37683664 + AluSq SINE Alu 1 305 -8 307 104 0 0 chr20 34470941 34470989 -37682893 + Alu SINE Alu 254 301 0 234 159 114 0 chr20 34470995 34471039 -37682843 - MIR SINE MIR -148 114 66 2082 114 27 0 chr20 34471109 34471407 -37682475 - AluSg1 SINE Alu -3 306 1 2106 123 3 22 chr20 34471769 34472085 -37681797 + AluSx SINE Alu 1 310 -2 2155 107 3 26 chr20 34472973 34473282 -37680600 - AluSx SINE Alu -10 302 1 804 154 24 0 chr20 34473299 34473422 -37680460 - AluJo SINE Alu -176 136 11 784 227 148 11 chr20 34473476 34473740 -37680142 - L1MC4 LINE L1 -886 7156 6857 2406 63 13 0 chr20 34473741 34474044 -37679838 - AluY SINE Alu -4 307 1 704 181 39 0 chr20 34474183 34474310 -37679572 - FLAM_C SINE Alu -10 133 2 1632 224 67 67 chr20 34474371 34474895 -37678987 - L1ME1 LINE L1 -32 6134 5608 2197 107 23 3 chr20 34474895 34475194 -37678688 - AluSx SINE Alu -7 305 1 1632 224 67 67 chr20 34475194 34475293 -37678589 - L1ME1 LINE L1 -557 5609 5511 204 349 71 24 chr20 34475523 34475649 -37678233 - MIR SINE MIR -66 196 65 2314 83 13 7 chr20 34475993 34476293 -37677589 + AluSp SINE Alu 1 302 -11 2071 155 10 0 chr20 34476300 34476609 -37677273 + AluSx SINE Alu 1 312 0 702 177 32 16 chr20 34476618 34476742 -37677140 + FLAM_C SINE Alu 2 127 -16 190 309 0 0 chr20 34477894 34477936 -37675946 - L2 LINE L2 -219 3053 3012 972 220 121 22 chr20 34478111 34478425 -37675457 - L1MC4 LINE L1 -1939 5869 5525 1931 144 14 0 chr20 34478595 34478886 -37674996 - AluSx SINE Alu -17 295 1 2434 71 37 11 chr20 34478920 34479271 -37674611 - L1PA13 LINE L1 0 6163 5804 2174 141 0 0 chr20 34479576 34479880 -37674002 + AluSx SINE Alu 1 304 -8 1929 144 0 4 chr20 34480037 34480314 -37673568 + AluSx SINE Alu 1 276 -36 7272 42 2 0 chr20 34480316 34480690 -37673192 - L1PA6 LINE L1 0 6154 5782 2505 64 3 6 chr20 34480690 34481002 -37672880 - AluY SINE Alu 0 311 1 7272 42 2 0 chr20 34481002 34482018 -37671864 - L1PA6 LINE L1 -372 5782 4763 1977 211 63 75 chr20 34482120 34482232 -37671650 - L1ME3A LINE L1 -5 6165 6053 1260 162 15 129 chr20 34482232 34482387 -37671495 + AluSx SINE Alu 5 102 -210 2116 112 7 3 chr20 34482387 34482681 -37671201 + AluSx SINE Alu 1 295 -17 1260 162 15 129 chr20 34482681 34482865 -37671017 + AluSx SINE Alu 102 305 -7 1977 211 63 75 chr20 34482865 34483242 -37670640 - L1ME3A LINE L1 -117 6053 5684 2382 80 0 7 chr20 34483242 34483543 -37670339 - AluY SINE Alu -12 299 1 1977 211 63 75 chr20 34483543 34483748 -37670134 - L1ME3A LINE L1 -486 5684 5478 2323 92 0 19 chr20 34483837 34484152 -37669730 - AluSg SINE Alu -1 309 1 453 95 0 16 chr20 34484152 34484215 -37669667 + AluSq SINE Alu 131 192 -121 973 27 0 9 chr20 34484315 34484427 -37669455 - AluY SINE Alu -200 111 1 331 286 53 70 chr20 34484530 34484701 -37669181 - L1ME LINE L1 -5901 169 2 2146 72 69 4 chr20 34485251 34485527 -37668355 - AluY SINE Alu -17 294 1 476 344 92 13 chr20 34485830 34486057 -37667825 - MIR SINE MIR 0 262 18 195 269 139 56 chr20 34486298 34486373 -37667509 - L2 LINE L2 -7 3265 3177 2560 48 0 3 chr20 34486373 34486666 -37667216 + AluY SINE Alu 2 293 -18 195 269 139 56 chr20 34486666 34486698 -37667184 - L2 LINE L2 -95 3177 3149 182 291 38 150 chr20 34486758 34486879 -37667003 - L2 LINE L2 -69 3203 3115 2196 118 7 0 chr20 34486879 34487176 -37666706 + AluJb SINE Alu 1 299 -13 182 291 38 150 chr20 34487176 34487267 -37666615 - L2 LINE L2 -157 3115 3015 270 176 0 0 chr20 34487493 34487544 -37666338 + T-rich Low_complexity Low_complexity 1 51 0 2599 65 0 0 chr20 34487661 34487969 -37665913 + AluY SINE Alu 1 308 -3 2099 136 0 7 chr20 34488392 34488706 -37665176 + AluJb SINE Alu 1 312 0 277 293 75 28 chr20 34489076 34489182 -37664700 - MER5A DNA MER1_type -44 145 35 336 24 0 0 chr20 34489190 34489231 -37664651 + (TCTCCC)n Simple_repeat Simple_repeat 1 41 0 7403 62 11 16 chr20 34489231 34490802 -37663080 + SVA Other Other 57 1386 0 2155 107 4 0 chr20 34491601 34491904 -37661978 - AluSg SINE Alu 0 304 1 448 266 114 44 chr20 34491905 34492424 -37661458 - L1M4 LINE L1 -1275 4871 4317 2266 105 3 13 chr20 34492458 34492762 -37661120 - AluSx SINE Alu -11 301 1 5299 200 78 26 chr20 34492817 34492913 -37660969 + L1ME LINE L1 3851 3941 -2225 2214 121 0 13 chr20 34492913 34493219 -37660663 - AluSx SINE Alu -10 302 1 5299 200 78 26 chr20 34493219 34493321 -37660561 + L1ME LINE L1 3941 4036 -2130 861 142 0 8 chr20 34493321 34493455 -37660427 - FLAM_C SINE Alu 0 133 1 5299 200 78 26 chr20 34493455 34493916 -37659966 + L1ME LINE L1 4036 4472 -1694 2445 88 0 0 chr20 34493916 34494212 -37659670 + AluSc SINE Alu 1 296 -13 5299 200 78 26 chr20 34494212 34495158 -37658724 + L1ME LINE L1 4472 5531 -635 2017 217 42 13 chr20 34495158 34495610 -37658272 - LTR40c LTR ERVL 0 465 1 1292 210 89 11 chr20 34495612 34495893 -37657989 - HERVL40 LTR ERVL -2 5528 5226 2040 250 25 14 chr20 34495900 34496412 -37657470 - HERVL40 LTR ERVL -570 4960 4443 2495 82 0 0 chr20 34496412 34496715 -37657167 - AluY SINE Alu -8 303 1 577 93 98 0 chr20 34496716 34496875 -37657007 + L1MB7 LINE L1 5845 6181 -3 3003 241 77 33 chr20 34496877 34497705 -37656177 - HERVL40 LTR ERVL -1570 3960 3096 377 195 0 11 chr20 34497729 34497816 -37656066 + CT-rich Low_complexity Low_complexity 4 89 0 236 156 0 0 chr20 34497837 34497869 -37656013 + Tigger3(Golem) DNA MER2_type 33 64 -2965 1522 93 17 51 chr20 34497869 34498105 -37655777 + AluSg/x SINE Alu 82 309 -3 3273 120 40 24 chr20 34498106 34498428 -37655454 + Tigger3(Golem) DNA MER2_type 338 672 -2357 2336 99 0 0 chr20 34498428 34498730 -37655152 + AluSg SINE Alu 1 302 -8 3273 120 40 24 chr20 34498730 34498906 -37654976 + Tigger3(Golem) DNA MER2_type 672 844 -2185 794 203 25 6 chr20 34498906 34499085 -37654797 + FRAM SINE Alu 1 231 -242 1049 94 6 22 chr20 34499085 34499266 -37654616 + (GGAA)n Simple_repeat Simple_repeat 2 179 0 794 203 25 6 chr20 34499266 34499376 -37654506 + FRAM SINE Alu 231 337 0 332 203 16 0 chr20 34499376 34499440 -37654442 + GA-rich Low_complexity Low_complexity 5 69 0 1033 122 52 103 chr20 34499440 34499522 -37654360 + Tigger3(Golem) DNA MER2_type 831 916 -2113 2381 86 0 17 chr20 34499522 34499824 -37654058 + AluSq SINE Alu 1 297 -16 759 152 8 8 chr20 34499834 34499959 -37653923 + FLAM_C SINE Alu 2 126 -7 1033 122 52 103 chr20 34499959 34500078 -37653804 + Tigger3(Golem) DNA MER2_type 925 1032 -1997 4563 185 80 40 chr20 34500081 34501192 -37652690 - L1 LINE L1 -1110 5036 3882 * 5060 129 32 36 chr20 34501177 34502144 -37651738 - L1M4c LINE L1 -4759 1625 663 989 167 42 0 chr20 34502144 34502312 -37651570 - L1M4c LINE L1 -6206 178 4 1883 78 62 0 chr20 34502500 34502743 -37651139 - AluSq SINE Alu -17 296 39 318 250 62 10 chr20 34502887 34502983 -37650899 - MIR SINE MIR -73 135 35 2136 156 46 85 chr20 34503202 34503682 -37650200 - MER65C LTR ERV1 0 461 1 305 24 24 0 chr20 34505457 34505499 -37648383 + (TTTTA)n Simple_repeat Simple_repeat 3 45 0 2203 114 7 0 chr20 34505508 34505797 -37648085 - AluSx SINE Alu -21 291 1 24 32 0 0 chr20 34507010 34507041 -37646841 + AT_rich Low_complexity Low_complexity 1 31 0 2525 35 0 3 chr20 34507048 34507354 -37646528 + AluY SINE Alu 2 306 0 537 281 72 53 chr20 34507767 34508087 -37645795 - L1ME4a LINE L1 -281 5840 5515 1228 114 0 0 chr20 34508318 34508484 -37645398 + AluSg SINE Alu 1 166 -144 2312 102 0 7 chr20 34508622 34508927 -37644955 + AluSx SINE Alu 1 303 -9 23 0 0 0 chr20 34509069 34509092 -37644790 + AT_rich Low_complexity Low_complexity 1 23 0 1755 134 47 0 chr20 34509102 34509377 -37644505 + AluSp SINE Alu 16 303 -10 1162 173 92 26 chr20 34509444 34509715 -37644167 + AluJo SINE Alu 14 302 -10 2259 121 0 0 chr20 34509746 34510044 -37643838 + AluSx SINE Alu 4 301 -11 806 118 9 0 chr20 34510048 34510158 -37643724 + AluSg SINE Alu 1 111 -199 254 143 0 0 chr20 34510158 34510193 -37643689 - Alu SINE Alu -267 35 1 1104 171 9 28 chr20 34510988 34511199 -37642683 - AluSg/x SINE Alu -1 309 103 1570 122 5 5 chr20 34511277 34511499 -37642383 - AluSg SINE Alu -88 222 1 2127 127 3 0 chr20 34511503 34511802 -37642080 - AluY SINE Alu -11 300 1 2093 110 7 36 chr20 34512036 34512344 -37641538 + AluSp SINE Alu 1 299 -14 1412 128 0 0 chr20 34512365 34512569 -37641313 - AluSg/x SINE Alu 0 312 109 492 184 0 0 chr20 34512656 34512732 -37641150 - MER2 DNA MER2_type -3 342 267 2034 152 0 0 chr20 34512743 34513039 -37640843 + AluSx SINE Alu 1 296 -16 678 231 8 0 chr20 34513048 34513182 -37640700 - MER2 DNA MER2_type -209 136 2 367 329 71 35 chr20 34513197 34513367 -37640515 - MER5A DNA MER1_type -13 176 1 2307 71 14 3 chr20 34513420 34513716 -37640166 + AluSp SINE Alu 1 299 -14 2083 141 3 0 chr20 34514044 34514343 -37639539 + AluSx SINE Alu 1 300 -12 320 165 19 19 chr20 34514453 34514556 -37639326 + (CA)n Simple_repeat Simple_repeat 2 104 0 222 37 0 0 chr20 34515376 34515403 -37638479 + (TG)n Simple_repeat Simple_repeat 2 28 0 1676 162 0 50 chr20 34516001 34516304 -37637578 + AluJo SINE Alu 1 288 -24 425 186 266 8 chr20 34516674 34516798 -37637084 + MER5A DNA MER1_type 27 182 -7 906 111 15 0 chr20 34516825 34516960 -37636922 - AluSg/x SINE Alu 0 310 174 203 281 112 0 chr20 34517090 34517179 -37636703 - L2 LINE L2 -101 3212 3114 2290 98 16 0 chr20 34517234 34517539 -37636343 - AluSp SINE Alu -3 310 1 26 0 0 0 chr20 34517687 34517713 -37636169 + AT_rich Low_complexity Low_complexity 1 26 0 2129 124 0 7 chr20 34518393 34518691 -37635191 - AluSx SINE Alu -16 296 1 949 209 8 56 chr20 34518694 34518743 -37635139 - L1MB8 LINE L1 0 6178 6128 2389 84 3 3 chr20 34518743 34519041 -37634841 - AluSp SINE Alu -15 298 1 949 209 8 56 chr20 34519041 34519208 -37634674 - L1MB8 LINE L1 -50 6128 5973 1719 203 0 7 chr20 34519208 34519509 -37634373 - AluJo SINE Alu -13 299 1 949 209 8 56 chr20 34519509 34519540 -37634342 - L1MB8 LINE L1 -205 5973 5942 534 187 154 8 chr20 34519540 34519663 -37634219 - MER82 DNA MER2_type -261 392 252 494 33 0 0 chr20 34519681 34519741 -37634141 - AluJ/FLAM SINE Alu -251 61 2 366 123 18 0 chr20 34519769 34519826 -37634056 + L1PB3 LINE L1 6090 6147 -7 669 212 20 20 chr20 34519840 34519991 -37633891 - MER82 DNA MER2_type -458 195 45 761 145 15 0 chr20 34520008 34520139 -37633743 - L1MB8 LINE L1 -399 5785 5653 1757 160 0 50 chr20 34520755 34520924 -37632958 - AluSx SINE Alu -10 302 126 2160 141 0 0 chr20 34520924 34521228 -37632654 - AluSx SINE Alu -8 304 1 1757 160 0 50 chr20 34521228 34521243 -37632639 - AluSx SINE Alu -186 126 112 195 42 0 0 chr20 34521243 34521267 -37632615 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 1757 160 0 50 chr20 34521267 34521399 -37632483 - AluSx SINE Alu -200 112 1 924 219 0 48 chr20 34521495 34521705 -37632177 - AluJo SINE Alu -92 220 21 222 37 0 0 chr20 34522247 34522274 -37631608 + (TG)n Simple_repeat Simple_repeat 1 27 0 844 134 8 0 chr20 34522275 34522394 -37631488 - FLAM_C SINE Alu -23 120 1 2429 58 0 0 chr20 34522566 34522878 -37631004 - AluY SINE Alu 0 314 3 823 149 182 39 chr20 34523038 34523219 -37630663 + AluJo SINE Alu 1 207 -105 351 0 0 0 chr20 34523299 34523338 -37630544 + (TA)n Simple_repeat Simple_repeat 2 40 0 1990 135 0 13 chr20 34523338 34523642 -37630240 - AluSq SINE Alu -13 300 1 779 178 0 15 chr20 34523645 34523780 -37630102 - AluJo/FLAM SINE Alu -169 133 1 2023 123 18 0 chr20 34523979 34524263 -37629619 - AluSx SINE Alu -18 294 6 2041 113 3 11 chr20 34524355 34524665 -37629217 + AluSx SINE Alu 2 309 0 270 226 0 88 chr20 34525503 34525605 -37628277 - L1MC5 LINE L1 -30 7931 7839 1729 193 47 94 chr20 34526684 34527217 -37626665 - L1ME1 LINE L1 -10 6156 5649 1963 107 0 57 chr20 34527249 34527572 -37626310 + AluSx SINE Alu 3 308 0 613 140 61 44 chr20 34527573 34527687 -37626195 - AluJb SINE Alu -194 118 3 670 233 87 10 chr20 34527691 34527878 -37626004 - L1ME1 LINE L1 -510 5656 5485 2061 121 31 0 chr20 34527878 34528168 -37625714 - AluSx SINE Alu -13 299 1 670 233 87 10 chr20 34528168 34528278 -37625604 - L1ME1 LINE L1 -681 5485 5165 189 0 0 0 chr20 34528307 34528328 -37625554 + (T)n Simple_repeat Simple_repeat 1 21 0 2103 146 6 3 chr20 34528328 34528650 -37625232 - Tigger1 DNA MER2_type -2092 326 4 569 228 134 33 chr20 34528789 34529039 -37624843 + MER102b DNA MER1_type 29 330 -11 213 108 0 0 chr20 34529153 34529190 -37624692 + (T)n Simple_repeat Simple_repeat 1 37 0 26 0 0 0 chr20 34529194 34529220 -37624662 + AT_rich Low_complexity Low_complexity 1 26 0 9068 26 3 260 chr20 34529226 34531089 -37622793 - SVA Other Other -2 1384 1 2592 210 108 36 chr20 34531089 34531916 -37621966 - L1ME1 LINE L1 -1018 5128 4228 2082 134 20 0 chr20 34531916 34532221 -37621661 - AluSx SINE Alu -1 311 1 2592 210 108 36 chr20 34532221 34532278 -37621604 - L1ME1 LINE L1 -1918 4228 4177 318 311 81 11 chr20 34532640 34532851 -37621031 + MIR SINE MIR 10 234 -28 1353 164 97 53 chr20 34533227 34533526 -37620356 - AluJo SINE Alu 0 312 1 1218 136 179 8 chr20 34533804 34534055 -37619827 - MER7A DNA MER2_type -1 345 54 219 169 85 17 chr20 34534447 34534506 -37619376 + MER91C DNA MER1_type 43 105 -35 1037 163 0 12 chr20 34535426 34535598 -37618284 - FRAM SINE Alu -6 170 1 440 259 76 8 chr20 34535602 34535733 -37618149 - MER5A DNA MER1_type -6 183 44 30 0 0 0 chr20 34535988 34536018 -37617864 + AT_rich Low_complexity Low_complexity 1 30 0 1476 194 26 4 chr20 34536248 34536521 -37617361 - AluJb SINE Alu -33 279 1 2196 111 7 0 chr20 34536566 34536864 -37617018 - AluSg SINE Alu -9 301 2 181 317 146 0 chr20 34537080 34537203 -37616679 - L2 LINE L2 -203 3069 2929 * 198 200 0 22 chr20 34537200 34537245 -37616637 - MIR SINE MIR -64 144 101 26 0 0 0 chr20 34537369 34537395 -37616487 + AT_rich Low_complexity Low_complexity 1 26 0 307 200 0 0 chr20 34537395 34537455 -37616427 - Alu SINE Alu 0 300 241 1198 245 74 44 chr20 34537455 34537890 -37615992 + L2 LINE L2 2512 2955 -317 480 210 35 125 chr20 34537981 34538093 -37615789 + L2 LINE L2 3132 3220 -93 2292 108 3 0 chr20 34538093 34538400 -37615482 - AluSg SINE Alu -2 308 1 480 210 35 125 chr20 34538400 34538487 -37615395 + L2 LINE L2 3220 3313 0 783 32 0 0 chr20 34538487 34538581 -37615301 + (AATAG)n Simple_repeat Simple_repeat 3 96 0 210 234 21 43 chr20 34538582 34538629 -37615253 - L2 LINE L2 -80 3192 3147 1669 122 41 24 chr20 34538997 34539291 -37614591 - AluSq SINE Alu -2 311 13 1265 133 5 182 chr20 34539982 34540350 -37613532 - AluJb SINE Alu -9 303 1 2234 117 3 0 chr20 34540475 34540775 -37613107 + AluSx SINE Alu 2 302 -10 718 178 75 34 chr20 34540820 34540966 -37612916 + FRAM SINE Alu 20 171 -5 1563 147 94 8 chr20 34540977 34541243 -37612639 + AluJo SINE Alu 1 289 -23 387 0 0 0 chr20 34541243 34541286 -37612596 + (TG)n Simple_repeat Simple_repeat 2 44 0 706 143 45 45 chr20 34541498 34541631 -37612251 - FLAM_C SINE Alu 0 133 1 2298 100 10 0 chr20 34541790 34542099 -37611783 - AluSx SINE Alu 0 312 1 1307 178 50 60 chr20 34542233 34542514 -37611368 + AluJo SINE Alu 1 278 -34 360 64 0 0 chr20 34542514 34542561 -37611321 + (TCCA)n Simple_repeat Simple_repeat 2 48 0 241 339 9 17 chr20 34542760 34542875 -37611007 + L1M4b LINE L1 11 124 -6735 * 1883 161 119 22 chr20 34542857 34543309 -37610573 + L1MB8 LINE L1 5682 6177 -1 180 0 0 0 chr20 34543417 34543437 -37610445 + (T)n Simple_repeat Simple_repeat 1 20 0 252 0 0 0 chr20 34544164 34544192 -37609690 + (TTTA)n Simple_repeat Simple_repeat 4 31 0 1959 113 3 7 chr20 34544195 34544478 -37609404 - AluSx SINE Alu -30 282 1 2442 90 3 0 chr20 34544761 34545071 -37608811 - AluSp SINE Alu -2 311 1 1989 126 0 4 chr20 34545110 34545387 -37608495 - AluSx SINE Alu -36 276 1 186 300 0 33 chr20 34545890 34545950 -37607932 - MIR3 SINE MIR -22 186 129 379 280 136 74 chr20 34546289 34546707 -37607175 + L2 LINE L2 2816 3259 -54 2080 120 0 23 chr20 34546788 34547087 -37606795 - AluSx SINE Alu -20 292 1 748 199 51 26 chr20 34547096 34547252 -37606630 - MER58A DNA MER1_type -16 208 49 26 0 0 0 chr20 34547448 34547474 -37606408 + AT_rich Low_complexity Low_complexity 1 26 0 2095 117 20 0 chr20 34547804 34548104 -37605778 - AluSx SINE Alu -6 306 1 273 119 0 0 chr20 34548106 34548148 -37605734 + (TTTTC)n Simple_repeat Simple_repeat 2 43 0 544 96 0 0 chr20 34548151 34548234 -37605648 - AluSp/q SINE Alu -2 311 229 310 136 9 0 chr20 34548234 34548293 -37605589 - Alu SINE Alu -254 45 2 1109 176 137 31 chr20 34548499 34548825 -37605057 - MER93b LTR ERV1 0 403 14 2130 198 85 170 chr20 34549060 34549410 -37604472 - L1MC4 LINE L1 -89 7953 7575 1629 213 0 3 chr20 34549410 34549715 -37604167 - AluJb SINE Alu -1 311 8 2130 198 85 170 chr20 34549715 34550151 -37603731 - L1MC4 LINE L1 -467 7575 7104 766 215 0 15 chr20 34550151 34550286 -37603596 - AluJo SINE Alu -175 137 5 2130 198 85 170 chr20 34550286 34550560 -37603322 - L1MC4 LINE L1 -938 7104 6789 2433 88 0 0 chr20 34550560 34550868 -37603014 - AluSg SINE Alu -2 308 1 2130 198 85 170 chr20 34550868 34551035 -37602847 - L1MC4 LINE L1 -1253 6789 6609 1890 155 3 3 chr20 34551072 34551362 -37602520 - AluJo SINE Alu -22 290 1 2109 123 23 3 chr20 34551378 34551680 -37602202 - AluSg SINE Alu 0 310 3 1836 159 7 3 chr20 34551692 34551988 -37601894 - AluSx SINE Alu -15 297 1 1118 199 107 100 chr20 34551994 34552392 -37601490 - L1MC5 LINE L1 -447 7514 7109 571 223 25 0 chr20 34552392 34552513 -37601369 - L1PA16 LINE L1 -7 6159 6036 1118 199 107 100 chr20 34552513 34552713 -37601169 - L1MC5 LINE L1 -852 7109 6912 2063 141 13 0 chr20 34552724 34553029 -37600853 - AluSx SINE Alu -3 309 1 1996 125 0 4 chr20 34553041 34553341 -37600541 - AluSc SINE Alu 0 299 1 769 216 61 86 chr20 34553341 34553586 -37600296 - L1MC5 LINE L1 -1040 6921 6683 822 232 58 11 chr20 34553609 34553853 -37600029 - MLT1F LTR MaLR -50 517 175 263 283 136 54 chr20 34553895 34554079 -37599803 + MIR SINE MIR 45 243 -19 2370 100 0 0 chr20 34554422 34554731 -37599151 - AluSc SINE Alu 0 309 1 674 175 0 0 chr20 34554731 34554834 -37599048 - FLAM_C SINE Alu -5 138 36 647 175 0 0 chr20 34554833 34554930 -37598952 - AluJ/FLAM SINE Alu -215 97 1 * 601 177 40 24 chr20 34554950 34555074 -37598808 - L1MD2 LINE L1 -13 6346 6221 215 228 0 29 chr20 34555879 34555941 -37597941 + GA-rich Low_complexity Low_complexity 1 60 0 800 160 8 17 chr20 34556944 34557063 -37596819 - FLAM_C SINE Alu -15 118 1 2229 89 23 0 chr20 34557807 34558110 -37595772 - AluSg SINE Alu 0 310 1 1636 198 0 10 chr20 34558121 34558429 -37595453 - AluJb SINE Alu -1 311 7 2342 67 0 0 chr20 34558468 34558774 -37595108 - AluY SINE Alu 0 306 1 252 242 13 134 chr20 34559593 34559750 -37594132 - MIR3 SINE MIR -17 191 54 2242 112 0 3 chr20 34559878 34560174 -37593708 + AluSx SINE Alu 1 295 -17 230 241 89 0 chr20 34560202 34560281 -37593601 - L2 LINE L2 -197 3075 2990 1872 101 110 44 chr20 34560952 34561133 -37592749 + MER44D DNA MER2_type 1 169 -2322 2440 78 0 10 chr20 34561133 34561439 -37592443 - AluSq SINE Alu -10 303 1 1872 101 110 44 chr20 34561439 34561575 -37592307 + MER44D DNA MER2_type 169 609 0 356 184 72 43 chr20 34561637 34561737 -37592145 + MIR SINE MIR 63 171 -37 27 0 0 0 chr20 34563290 34563317 -37590565 + AT_rich Low_complexity Low_complexity 1 27 0 533 235 0 0 chr20 34563468 34563566 -37590316 + FLAM_A SINE Alu 1 98 -44 1992 110 7 10 chr20 34563566 34563858 -37590024 + AluSx SINE Alu 13 303 -9 268 244 133 44 chr20 34565272 34565407 -37588475 - L1MEc LINE L1 -4682 1714 1568 1783 119 0 15 chr20 34565432 34565701 -37588181 - AluSx SINE Alu 0 312 48 677 240 76 33 chr20 34565723 34565998 -37587884 + L1MC4 LINE L1 7720 8006 -36 818 326 116 23 chr20 34566081 34566603 -37587279 - L2 LINE L2 -266 3047 2467 595 225 57 105 chr20 34566636 34566970 -37586912 - L2 LINE L2 0 3313 2996 2313 120 0 0 chr20 34567027 34567335 -37586547 - AluSg SINE Alu -2 308 1 1568 176 3 31 chr20 34567350 34567639 -37586243 - AluJb SINE Alu -26 286 6 2362 80 10 0 chr20 34567899 34568200 -37585682 + AluSp SINE Alu 1 304 -9 2459 61 0 32 chr20 34569329 34569642 -37584240 - AluY SINE Alu -8 303 1 241 274 44 22 chr20 34571281 34571376 -37582506 + MIR SINE MIR 63 163 -45 21 0 0 0 chr20 34572584 34572605 -37581277 + AT_rich Low_complexity Low_complexity 1 21 0 335 113 0 16 chr20 34572666 34572728 -37581154 - Alu SINE Alu 0 302 242 228 237 0 0 chr20 34572719 34572757 -37581125 - AluJ/monomer SINE Alu -261 38 1 * 823 153 0 67 chr20 34572772 34572922 -37580960 - FLAM_C SINE Alu -2 141 2 831 248 93 22 chr20 34572922 34573244 -37580638 - L1M4 LINE L1 -945 5201 4857 2257 97 3 10 chr20 34573373 34573672 -37580210 - AluSp SINE Alu -16 297 1 311 372 0 0 chr20 34573906 34574000 -37579882 - L2 LINE L2 -33 3239 3146 1530 198 3 11 chr20 34574125 34574408 -37579474 + AluJb SINE Alu 1 281 -31 26 0 0 0 chr20 34574408 34574434 -37579448 + AT_rich Low_complexity Low_complexity 1 26 0 222 91 0 0 chr20 34574552 34574585 -37579297 + (TCCCC)n Simple_repeat Simple_repeat 1 33 0 2027 146 17 0 chr20 34574611 34574912 -37578970 - AluSg SINE Alu -4 306 1 231 61 0 0 chr20 34575036 34575069 -37578813 + (TG)n Simple_repeat Simple_repeat 2 34 0 242 362 69 9 chr20 34575646 34575762 -37578120 + L2 LINE L2 3146 3268 -4 2241 87 18 0 chr20 34575766 34576052 -37577830 + AluSq SINE Alu 1 291 -22 883 124 0 0 chr20 34576094 34576215 -37577667 + AluSq/x SINE Alu 1 121 -191 2157 124 7 0 chr20 34576216 34576514 -37577368 + AluSx SINE Alu 2 301 -11 31 26 0 0 chr20 34577082 34577120 -37576762 + AT_rich Low_complexity Low_complexity 1 38 0 1950 135 7 3 chr20 34577466 34577803 -37576079 - AluSq SINE Alu 0 338 1 2254 74 40 14 chr20 34577815 34578112 -37575770 - AluY SINE Alu -6 305 1 239 288 0 0 chr20 34579136 34579195 -37574687 - L1ME LINE L1 -462 5659 5601 1642 110 163 4 chr20 34579725 34579989 -37573893 - AluSg1 SINE Alu -3 306 1 251 254 67 75 chr20 34580075 34580209 -37573673 + L3 LINE CR1 1436 1568 -9 1681 173 0 7 chr20 34580481 34580797 -37573085 - AluJb SINE Alu 0 316 3 297 68 0 0 chr20 34580798 34580842 -37573040 + (TTTTG)n Simple_repeat Simple_repeat 1 44 0 2110 93 0 4 chr20 34580842 34581121 -37572761 - AluSc SINE Alu -31 278 1 1115 83 0 0 chr20 34581121 34581254 -37572628 - AluSc SINE Alu -176 133 1 507 247 24 16 chr20 34581617 34581776 -37572106 - L1MA10 LINE L1 0 6334 6150 259 225 22 11 chr20 34581915 34582004 -37571878 + (TA)n Simple_repeat Simple_repeat 2 91 0 2096 134 16 0 chr20 34582220 34582526 -37571356 + AluSx SINE Alu 1 311 -1 583 141 131 91 chr20 34583314 34583513 -37570369 - Charlie5 DNA MER1_type 0 2624 2418 1451 167 68 44 chr20 34583526 34583820 -37570062 + AluJb SINE Alu 1 301 -11 2177 108 0 14 chr20 34584448 34584745 -37569137 + AluSq SINE Alu 1 293 -20 1741 158 55 0 chr20 34584757 34585049 -37568833 + AluSx SINE Alu 1 308 -4 2145 120 0 0 chr20 34585636 34585927 -37567955 + AluSq SINE Alu 1 291 -22 232 171 24 0 chr20 34585930 34586012 -37567870 + (TA)n Simple_repeat Simple_repeat 1 84 0 651 202 54 23 chr20 34586134 34586263 -37567619 + FLAM_A SINE Alu 1 133 0 2090 129 7 3 chr20 34586604 34586906 -37566976 + AluSx SINE Alu 1 303 -9 812 179 115 111 chr20 34586926 34586947 -37566935 - Charlie1b DNA MER1_type -2508 253 234 2169 116 10 0 chr20 34586947 34587248 -37566634 - AluSx SINE Alu -8 304 1 812 179 115 111 chr20 34587248 34587478 -37566404 - Charlie1b DNA MER1_type -2527 234 1 675 293 98 11 chr20 34587481 34587768 -37566114 - L2 LINE L2 -499 2815 2504 2260 103 0 3 chr20 34587773 34588075 -37565807 - AluSc SINE Alu -8 301 1 227 254 0 34 chr20 34588139 34588198 -37565684 + MIR SINE MIR 33 89 -119 2242 97 0 3 chr20 34588775 34589065 -37564817 - AluSc SINE Alu -20 289 1 1708 167 43 10 chr20 34589095 34589395 -37564487 - AluSx SINE Alu -2 310 1 241 252 87 68 chr20 34589445 34589548 -37564334 - MIR SINE MIR -117 145 41 622 298 133 38 chr20 34590075 34590474 -37563408 + L2 LINE L2 2036 2472 -842 1629 170 26 26 chr20 34590475 34590787 -37563095 - AluJo SINE Alu 0 312 1 21 0 0 0 chr20 34590804 34590825 -37563057 + AT_rich Low_complexity Low_complexity 1 21 0 1695 136 33 15 chr20 34590970 34591243 -37562639 + MER1B DNA MER1_type 1 278 -61 671 208 64 69 chr20 34591246 34591391 -37562491 - AluJo SINE Alu -59 253 108 8813 54 8 2 chr20 34591391 34592455 -37561427 - MER11C LTR ERVK 0 1071 1 671 208 64 69 chr20 34592455 34592482 -37561400 - AluJo SINE Alu -204 108 82 482 260 81 16 chr20 34592505 34592534 -37561348 + MER58A DNA MER1_type 1 27 -314 2064 125 7 3 chr20 34592534 34592830 -37561052 + AluSx SINE Alu 1 297 -15 482 260 81 16 chr20 34592830 34592923 -37560959 + MER58A DNA MER1_type 27 131 -93 269 189 75 0 chr20 34592924 34592977 -37560905 + MER58A DNA MER1_type 168 224 0 2183 105 0 30 chr20 34593144 34593449 -37560433 - AluSx SINE Alu -16 296 1 2212 112 23 0 chr20 34593738 34594043 -37559839 - AluSq SINE Alu -1 312 1 282 314 0 0 chr20 34594428 34594530 -37559352 + L1ME LINE L1 5723 5824 -297 295 214 0 0 chr20 34594625 34594681 -37559201 - MLT1G LTR MaLR -6 584 529 371 174 27 48 chr20 34594706 34594813 -37559069 - AluS SINE Alu -236 63 1 2244 116 0 0 chr20 34594819 34595120 -37558762 - AluSx SINE Alu -11 301 1 1532 166 30 50 chr20 34595365 34595666 -37558216 - AluJo SINE Alu -17 295 1 548 202 0 0 chr20 34596113 34596202 -37557680 - Tigger7 DNA MER2_type 0 2587 2499 2776 147 118 10 chr20 34596226 34596716 -37557166 - Tigger7 DNA MER2_type -1944 543 1 246 246 16 0 chr20 34597021 34597082 -37556800 + (CATATA)n Simple_repeat Simple_repeat 2 63 0 225 286 0 24 chr20 34597726 34597811 -37556071 - MIR SINE MIR -105 103 31 292 318 87 7 chr20 34597821 34598044 -37555838 - MIR3 SINE MIR -14 248 8 2338 99 7 0 chr20 34599381 34599674 -37554208 - AluSx SINE Alu -17 295 1 1541 219 20 82 chr20 34599918 34600407 -37553475 - MLT1C LTR MaLR -4 463 5 947 242 73 51 chr20 34601018 34601044 -37552838 + L1M4 LINE L1 5341 5365 -809 1539 175 63 45 chr20 34601044 34601426 -37552456 - MLT1B LTR MaLR 0 390 2 947 242 73 51 chr20 34601426 34601749 -37552133 + L1M4 LINE L1 5365 5698 -476 2224 112 0 3 chr20 34602774 34603068 -37550814 + AluSx SINE Alu 1 293 -19 1730 138 6 83 chr20 34603557 34603883 -37549999 + AluJb SINE Alu 2 302 -10 1446 220 17 0 chr20 34605063 34605354 -37548528 - AluJo SINE Alu 0 312 17 368 296 0 11 chr20 34605954 34606042 -37547840 + Charlie1 DNA MER1_type 3 89 -2672 * 520 161 157 124 chr20 34606039 34606306 -37547576 + Charlie1 DNA MER1_type 2410 2685 -76 1316 176 97 29 chr20 34606368 34606647 -37547235 + AluJo SINE Alu 1 298 -14 362 229 107 15 chr20 34606715 34606846 -37547036 - L1ME3A LINE L1 -306 5864 5722 1350 267 69 24 chr20 34606852 34607271 -37546611 - MER68 LTR ERV1 -7 555 118 673 51 0 4 chr20 34607508 34607686 -37546196 + AluY SINE Alu 51 297 -14 488 143 41 10 chr20 34607781 34607879 -37546003 - L1MB3 LINE L1 0 6183 6083 2474 149 31 2 chr20 34607973 34608390 -37545492 - L1MB3 LINE L1 -30 6153 5725 666 133 0 10 chr20 34608432 34608530 -37545352 - MER68 LTR ERV1 -465 97 1 715 164 0 9 chr20 34608616 34608732 -37545150 + FLAM_A SINE Alu 11 125 -17 727 205 42 70 chr20 34609094 34609201 -37544681 + L1MDa LINE L1 21 121 -6419 301 193 211 61 chr20 34609201 34609315 -37544567 + FLAM_A SINE Alu 2 132 -1 727 205 42 70 chr20 34609315 34609422 -37544460 + L1MDa LINE L1 121 229 -6311 924 174 7 0 chr20 34609483 34609627 -37544255 + FRAM SINE Alu 1 142 -34 512 0 32 0 chr20 34609627 34609690 -37544192 + (TAGA)n Simple_repeat Simple_repeat 1 65 0 228 167 0 0 chr20 34609710 34609758 -37544124 + (TA)n Simple_repeat Simple_repeat 2 49 0 548 199 152 18 chr20 34609758 34609929 -37543953 + L1MDa LINE L1 2085 2278 -4262 297 175 48 16 chr20 34609926 34609989 -37543893 + L1MD2 LINE L1 6069 6133 -226 * 266 184 161 58 chr20 34609991 34610036 -37543846 + L1MD3 LINE L1 7829 7868 -127 1742 158 0 0 chr20 34610036 34610296 -37543586 + AluSx SINE Alu 37 296 -16 266 184 161 58 chr20 34610296 34610337 -37543545 + L1MD3 LINE L1 7868 7924 -71 1229 174 39 53 chr20 34610521 34610802 -37543080 + AluJo SINE Alu 19 295 -17 288 0 0 0 chr20 34612197 34612229 -37541653 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 1314 169 3 113 chr20 34612648 34613006 -37540876 + AluSx SINE Alu 1 312 0 1631 146 45 32 chr20 34613781 34614089 -37539793 + AluSx SINE Alu 1 312 0 1938 135 43 0 chr20 34614113 34614394 -37539488 + AluSx SINE Alu 1 293 -19 1106 215 63 36 chr20 34614427 34614729 -37539153 - L1MC4 LINE L1 -249 7793 7484 542 149 91 84 chr20 34614737 34614843 -37539039 + MER58 DNA MER1_type 2238 2347 -73 2157 99 6 29 chr20 34614843 34615155 -37538727 - AluSg SINE Alu -4 306 2 542 149 91 84 chr20 34615155 34615202 -37538680 + MER58 DNA MER1_type 2347 2392 -28 1707 161 39 7 chr20 34616959 34617115 -37536767 - AluJb SINE Alu -23 289 119 369 0 0 0 chr20 34617115 34617156 -37536726 + (TTTG)n Simple_repeat Simple_repeat 2 42 0 1707 161 39 7 chr20 34617156 34617279 -37536603 - AluJb SINE Alu -193 119 1 202 274 0 32 chr20 34617336 34617398 -37536484 + MER5B DNA MER1_type 86 145 -33 288 111 0 0 chr20 34617510 34617555 -37536327 + (A)n Simple_repeat Simple_repeat 1 45 0 195 42 0 0 chr20 34617792 34617816 -37536066 + (A)n Simple_repeat Simple_repeat 1 24 0 233 274 0 0 chr20 34618218 34618269 -37535613 + L2 LINE L2 3208 3258 -14 1509 179 57 4 chr20 34618773 34619052 -37534830 + AluJb SINE Alu 1 294 -18 647 197 143 0 chr20 34619061 34619208 -37534674 + L1MC4 LINE L1 7874 8041 -1 1207 171 104 46 chr20 34619221 34619376 -37534506 + AluJb SINE Alu 1 146 -156 2388 97 0 0 chr20 34619376 34619686 -37534196 + AluY SINE Alu 1 310 -1 1207 171 104 46 chr20 34619686 34619810 -37534072 + AluJb SINE Alu 146 296 -6 337 270 0 43 chr20 34619852 34619967 -37533915 + MIR3 SINE MIR 15 124 -84 313 299 239 0 chr20 34620387 34620554 -37533328 - MIR SINE MIR -6 256 50 2091 112 4 0 chr20 34620671 34620949 -37532933 + AluY SINE Alu 1 279 -32 582 198 54 0 chr20 34621080 34621191 -37532691 - FLAM_A SINE Alu -16 117 1 634 274 134 5 chr20 34621238 34621461 -37532421 - MER20B DNA MER1_type -235 548 297 354 299 51 19 chr20 34621481 34621638 -37532244 - L1ME LINE L1 -566 5600 5439 305 319 0 0 chr20 34621642 34621755 -37532127 - L1ME LINE L1 -797 5349 5237 2088 138 0 3 chr20 34622033 34622324 -37531558 - AluSx SINE Alu -22 290 1 667 142 0 62 chr20 34622540 34622653 -37531229 + FLAM_A SINE Alu 1 106 -36 762 168 0 15 chr20 34623672 34623803 -37530079 - FLAM_C SINE Alu -4 129 1 2466 74 0 0 chr20 34624588 34624887 -37528995 + AluY SINE Alu 1 299 -12 453 254 23 15 chr20 34625210 34625340 -37528542 - MER94 DNA DNA -3 131 1 1906 127 25 7 chr20 34625586 34625899 -37527983 - AluSg SINE Alu 0 318 1 1828 116 84 4 chr20 34626027 34626302 -37527580 - AluSg SINE Alu -13 297 1 1932 135 36 0 chr20 34626333 34626614 -37527268 - AluSx SINE Alu -21 291 1 1788 161 3 3 chr20 34626644 34626960 -37526922 + AluSx SINE Alu 1 316 0 27 62 0 0 chr20 34627430 34627478 -37526404 + AT_rich Low_complexity Low_complexity 1 48 0 2125 125 0 0 chr20 34627513 34627822 -37526060 - AluSg SINE Alu 0 309 1 1896 159 7 0 chr20 34627953 34628255 -37525627 + AluJb SINE Alu 9 312 0 395 263 156 45 chr20 34628308 34628532 -37525350 + HAL1 LINE L1 748 996 -1511 1011 243 144 28 chr20 34628558 34629087 -37524795 + HAL1 LINE L1 1221 1930 -577 1379 183 13 59 chr20 34629141 34629447 -37524435 + AluJo SINE Alu 1 292 -20 1739 70 0 22 chr20 34629607 34629835 -37524047 + AluSg/x SINE Alu 79 301 -9 2402 89 3 0 chr20 34631220 34631522 -37522360 - AluSp SINE Alu -10 303 1 2249 110 0 28 chr20 34631522 34631839 -37522043 - AluSx SINE Alu -4 308 1 235 293 37 12 chr20 34631897 34631979 -37521903 + MIR SINE MIR 15 98 -164 230 317 59 0 chr20 34632479 34632580 -37521302 + L2 LINE L2 2233 2339 -975 2528 70 0 0 chr20 34632848 34633147 -37520735 + AluY SINE Alu 1 299 -12 1707 163 7 29 chr20 34633155 34633462 -37520420 + AluJb SINE Alu 1 300 -12 217 275 239 14 chr20 34634397 34634535 -37519347 - MIR SINE MIR -1 261 93 1984 49 0 0 chr20 34634595 34634821 -37519061 - AluY SINE Alu -19 292 67 1725 140 4 4 chr20 34635167 34635417 -37518465 - AluSx SINE Alu -40 272 23 757 146 0 36 chr20 34635656 34635672 -37518210 - FLAM_C SINE Alu -169 133 118 432 0 0 0 chr20 34635672 34635720 -37518162 + (TG)n Simple_repeat Simple_repeat 1 48 0 757 146 0 36 chr20 34635720 34635840 -37518042 - FLAM_C SINE Alu -184 118 2 1634 171 23 29 chr20 34635875 34636184 -37517698 + AluJb SINE Alu 1 307 -5 294 239 28 0 chr20 34636366 34636437 -37517445 + MIR SINE MIR 3 75 -187 228 314 19 19 chr20 34636695 34636800 -37517082 + MIR3 SINE MIR 9 113 -95 1357 176 114 29 chr20 34636852 34637125 -37516757 + AluJo SINE Alu 4 299 -13 755 174 0 74 chr20 34637209 34637309 -37516573 + AluSx SINE Alu 20 126 -186 590 0 0 14 chr20 34637309 34637380 -37516502 + (TA)n Simple_repeat Simple_repeat 1 70 0 315 0 0 0 chr20 34637381 34637416 -37516466 + (TG)n Simple_repeat Simple_repeat 2 36 0 755 174 0 74 chr20 34637416 34637462 -37516420 + AluSx SINE Alu 125 157 -155 184 325 78 0 chr20 34637697 34637774 -37516108 - MIR SINE MIR -63 145 63 2308 94 13 16 chr20 34639547 34639855 -37514027 - AluSx SINE Alu -5 307 1 2126 119 0 22 chr20 34640129 34640448 -37513434 + AluSx SINE Alu 1 312 0 2120 118 3 3 chr20 34640826 34641139 -37512743 - AluSp SINE Alu 0 313 1 244 346 12 0 chr20 34641191 34641272 -37512610 + L3 LINE CR1 757 838 -739 368 270 0 0 chr20 34641272 34641372 -37512510 - L1MDb LINE L1 -5539 870 771 209 325 88 18 chr20 34642800 34642914 -37510968 + L3 LINE CR1 1453 1574 -3 1764 152 13 23 chr20 34643921 34644223 -37509659 - AluJb SINE Alu -13 299 1 543 328 133 30 chr20 34644308 34644705 -37509177 - L1ME4a LINE L1 -152 5969 5532 806 126 89 7 chr20 34645467 34645602 -37508280 + AluJo SINE Alu 1 146 -166 492 288 126 58 chr20 34645686 34645814 -37508068 + L1MEd LINE L1 675 793 -5326 2250 92 13 0 chr20 34645814 34646120 -37507762 + AluSg SINE Alu 1 310 0 492 288 126 58 chr20 34646120 34646300 -37507582 + L1MEd LINE L1 793 1004 -5115 2144 114 0 25 chr20 34646332 34646649 -37507233 + AluY SINE Alu 1 309 -2 447 276 55 28 chr20 34647382 34647527 -37506355 + MIR SINE MIR 81 229 -33 308 319 107 32 chr20 34648154 34648370 -37505512 - L2 LINE L2 -511 2803 2572 2005 127 10 10 chr20 34648949 34649256 -37504626 + AluSx SINE Alu 1 307 -5 503 81 122 14 chr20 34649391 34649465 -37504417 + AluJb SINE Alu 85 166 -146 * 703 115 0 0 chr20 34649464 34649560 -37504322 - AluSg/x SINE Alu -78 234 139 287 186 35 47 chr20 34651056 34651142 -37502740 - MIR SINE MIR -84 124 40 455 337 99 5 chr20 34651792 34651994 -37501888 - MIR SINE MIR -13 249 29 914 182 12 24 chr20 34652474 34652644 -37501238 - AluJb SINE Alu -8 304 137 192 77 0 0 chr20 34654378 34654404 -37499478 + (TTCA)n Simple_repeat Simple_repeat 4 29 0 300 344 57 0 chr20 34654626 34654748 -37499134 + MIR SINE MIR 117 245 -17 541 279 107 0 chr20 34655163 34655200 -37498682 - MIR SINE MIR -21 241 209 2031 147 0 0 chr20 34655200 34655506 -37498376 - AluSx SINE Alu -6 306 1 541 279 107 0 chr20 34655506 34655656 -37498226 - MIR SINE MIR -53 209 35 201 265 326 0 chr20 34655669 34655767 -37498115 - MIR SINE MIR -48 214 85 1378 171 28 35 chr20 34656223 34656509 -37497373 + AluJb SINE Alu 11 294 -18 2137 93 14 0 chr20 34658749 34659039 -37494843 + AluY SINE Alu 1 294 -17 242 320 87 10 chr20 34659250 34659353 -37494529 - MIR SINE MIR -92 170 60 2098 122 13 3 chr20 34659357 34659661 -37494221 + AluSx SINE Alu 2 308 -4 200 212 76 30 chr20 34662213 34662279 -37491603 + MIR SINE MIR 77 145 -117 401 231 104 113 chr20 34662624 34662845 -37491037 - MIR SINE MIR -16 246 28 322 289 237 6 chr20 34664763 34664936 -37488946 + L3 LINE CR1 1337 1549 -28 404 359 62 10 chr20 34665515 34665707 -37488175 + MIR SINE MIR 25 226 -36 195 353 229 0 chr20 34667020 34667142 -37486740 + MIR3 SINE MIR 33 182 -26 229 192 0 0 chr20 34667815 34667867 -37486015 + (CTGGGG)n Simple_repeat Simple_repeat 6 57 0 33 66 0 0 chr20 34667994 34668055 -37485827 + GC_rich Low_complexity Low_complexity 1 61 0 311 309 127 0 chr20 34668256 34668382 -37485500 + MIR SINE MIR 102 243 -19 351 302 218 8 chr20 34668450 34668825 -37485057 + L2 LINE L2 2637 3089 -183 216 0 0 0 chr20 34670931 34670955 -37482927 + (CAGCC)n Simple_repeat Simple_repeat 5 28 0 920 199 18 0 chr20 34671357 34671528 -37482354 - AluJo SINE Alu -19 293 120 398 210 68 25 chr20 34671552 34671696 -37482186 - MIR SINE MIR -63 145 8 198 323 16 63 chr20 34671959 34672086 -37481796 + MIR3 SINE MIR 39 159 -49 1513 158 62 15 chr20 34672227 34672499 -37481383 + AluJo SINE Alu 1 285 -27 563 254 5 74 chr20 34672651 34672818 -37481064 + L1ME3 LINE L1 5939 6089 -73 2091 131 0 0 chr20 34672818 34673116 -37480766 + AluSx SINE Alu 2 299 -13 563 254 5 74 chr20 34673116 34673165 -37480717 + L1ME3 LINE L1 6089 6140 -22 254 241 35 0 chr20 34673166 34673224 -37480658 + MIR SINE MIR 88 147 -115 932 210 136 29 chr20 34674180 34674452 -37479430 + MLT1F1 LTR MaLR 2 302 -265 417 180 79 0 chr20 34674508 34674597 -37479285 + MLT1F1 LTR MaLR 429 524 -43 1579 182 17 17 chr20 34674597 34674894 -37478988 - AluJo SINE Alu -15 297 1 298 273 236 6 chr20 34674983 34675148 -37478734 - MIR SINE MIR -50 212 10 202 275 138 0 chr20 34675180 34675260 -37478622 + L2 LINE L2 2311 2401 -913 188 300 171 0 chr20 34675711 34675781 -37478101 + L2 LINE L2 3186 3267 -5 198 325 65 0 chr20 34675948 34676025 -37477857 - MIR SINE MIR -171 91 10 2350 102 0 0 chr20 34676724 34677028 -37476854 + AluSx SINE Alu 1 304 -8 2001 154 3 0 chr20 34677046 34677357 -37476525 + AluSx SINE Alu 1 312 0 484 253 155 11 chr20 34678082 34678256 -37475626 + MIR SINE MIR 64 262 0 704 266 73 18 chr20 34679078 34679296 -37474586 + MIR SINE MIR 33 262 0 24 32 0 0 chr20 34679558 34679589 -37474293 + GC_rich Low_complexity Low_complexity 1 31 0 33 43 0 0 chr20 34679646 34679693 -37474189 + GC_rich Low_complexity Low_complexity 1 47 0 25 65 0 0 chr20 34679828 34679874 -37474008 + GC_rich Low_complexity Low_complexity 1 46 0 257 194 32 0 chr20 34680072 34680134 -37473748 + (CGGGG)n Simple_repeat Simple_repeat 4 67 0 218 241 28 32 chr20 34680608 34680723 -37473159 - L2 LINE L2 -2 3270 3116 1862 134 24 3 chr20 34680739 34681031 -37472851 + AluJb SINE Alu 3 300 -12 383 243 108 68 chr20 34681268 34681416 -37472466 + MER5A DNA MER1_type 5 158 -31 735 158 0 30 chr20 34681482 34681615 -37472267 - FLAM_A SINE Alu 0 133 5 337 315 105 33 chr20 34681893 34682074 -37471808 - MIR3 SINE MIR -9 199 6 306 278 173 8 chr20 34682256 34682389 -37471493 - MIR SINE MIR -6 256 102 255 318 150 6 chr20 34682728 34682901 -37470981 - MIR SINE MIR -37 225 28 615 190 107 0 chr20 34683224 34683345 -37470537 - L2 LINE L2 -1 3271 3138 292 364 136 16 chr20 34683725 34683909 -37469973 + MIR SINE MIR 2 207 -55 2368 84 3 0 chr20 34684029 34684339 -37469543 - AluSp SINE Alu -2 311 1 2222 97 7 3 chr20 34684339 34684638 -37469244 - AluSx SINE Alu -12 300 1 244 234 0 0 chr20 34684817 34684864 -37469018 + MIR SINE MIR 216 262 0 2230 119 0 0 chr20 34684944 34685255 -37468627 + AluSq SINE Alu 1 311 -2 2300 94 0 0 chr20 34685297 34685596 -37468286 + AluSx SINE Alu 1 299 -13 225 235 174 9 chr20 34685616 34685731 -37468151 + MIR3 SINE MIR 41 174 -34 390 183 183 48 chr20 34685982 34686108 -37467774 + MIR SINE MIR 119 261 -1 2329 91 0 3 chr20 34686184 34686491 -37467391 + AluSx SINE Alu 2 307 -5 1225 136 0 0 chr20 34686491 34686667 -37467215 + AluSg/x SINE Alu 134 309 -3 497 266 83 18 chr20 34686806 34686975 -37466907 + MER104 DNA MER2_type 1 180 0 790 330 99 4 chr20 34687658 34688434 -37465448 + L2 LINE L2 2447 3301 -12 2038 137 0 9 chr20 34688484 34688799 -37465083 + AluSx SINE Alu 1 312 0 2315 77 7 0 chr20 34688842 34689139 -37464743 - AluSp SINE Alu -14 299 1 1026 257 35 16 chr20 34689158 34689438 -37464444 + Charlie4a DNA MER1_type 1 289 -1672 2193 113 3 3 chr20 34689438 34689749 -37464133 - AluSx SINE Alu -1 311 1 1026 257 35 16 chr20 34689749 34689783 -37464099 + Charlie4a DNA MER1_type 289 321 -187 2230 99 3 0 chr20 34689784 34690087 -37463795 + AluSc SINE Alu 1 304 -5 28 29 0 0 chr20 34690379 34690414 -37463468 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr20 34690590 34690612 -37463270 + AT_rich Low_complexity Low_complexity 1 22 0 2125 112 3 0 chr20 34691392 34691687 -37462195 - AluSx SINE Alu -16 296 1 1301 171 72 0 chr20 34691708 34691959 -37461923 - AluJb SINE Alu -32 280 12 6830 61 17 40 chr20 34692033 34694270 -37459612 + SVA Other Other 13 1383 -3 22 0 0 0 chr20 34694270 34694292 -37459590 + AT_rich Low_complexity Low_complexity 1 22 0 8921 65 5 137 chr20 34694293 34695890 -37457992 + SVA Other Other 1 1386 0 308 256 13 0 chr20 34695904 34695982 -37457900 + L1MC5 LINE L1 7812 7890 -71 27 0 0 0 chr20 34695982 34696009 -37457873 + AT_rich Low_complexity Low_complexity 1 27 0 2144 83 0 10 chr20 34696009 34696297 -37457585 + AluY SINE Alu 1 285 -26 228 35 0 0 chr20 34696307 34696336 -37457546 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 685 303 67 0 chr20 34696856 34697051 -37456831 - MIR SINE MIR -53 209 2 1366 229 158 37 chr20 34697077 34697514 -37456368 - LTR16C LTR ERVL -1 490 1 3685 118 25 6 chr20 34697564 34698080 -37455802 - MER1A DNA MER1_type 0 527 2 407 220 11 0 chr20 34698276 34698367 -37455515 + MER5A DNA MER1_type 18 109 -80 2143 114 20 0 chr20 34698546 34698845 -37455037 - AluSx SINE Alu -7 305 1 2354 78 0 13 chr20 34698875 34699183 -37454699 + AluY SINE Alu 1 304 -7 527 256 42 73 chr20 34699363 34699469 -37454413 + MIR SINE MIR 20 119 -143 2270 103 0 0 chr20 34699469 34699781 -37454101 - AluSx SINE Alu 0 312 1 527 256 42 73 chr20 34699781 34699865 -37454017 + MIR SINE MIR 119 204 -58 738 199 0 21 chr20 34699866 34700007 -37453875 + FLAM_C SINE Alu 2 139 -4 462 246 120 0 chr20 34700101 34700243 -37453639 - MIR SINE MIR -103 159 1 962 188 211 4 chr20 34700264 34700455 -37453427 + MER33 DNA MER1_type 1 151 -2434 1653 133 72 4 chr20 34700455 34700733 -37453149 - AluJb SINE Alu -13 299 3 962 188 211 4 chr20 34700733 34700807 -37453075 + MER33 DNA MER1_type 151 321 -3 232 266 51 0 chr20 34700984 34701063 -37452819 - MIR SINE MIR -84 124 42 589 191 4 93 chr20 34701556 34701738 -37452144 - L1M4 LINE L1 -2827 3319 3163 1894 112 10 24 chr20 34701738 34702034 -37451848 - AluSx SINE Alu -12 300 9 589 191 4 93 chr20 34702034 34702097 -37451785 - L1M4 LINE L1 -2983 3163 3096 592 155 48 0 chr20 34702113 34702216 -37451666 - FLAM_C SINE Alu -23 120 13 1309 134 10 0 chr20 34702245 34702439 -37451443 - AluSg/x SINE Alu -11 301 106 26 30 0 0 chr20 34702465 34702498 -37451384 + AT_rich Low_complexity Low_complexity 1 33 0 1710 138 44 17 chr20 34702577 34702874 -37451008 + AluSx SINE Alu 2 306 -6 247 200 120 40 chr20 34703110 34703185 -37450697 - MIR SINE MIR -69 139 59 469 328 6 26 chr20 34703317 34704023 -37449859 + C-rich Low_complexity Low_complexity 1 691 0 637 288 173 11 chr20 34704444 34704715 -37449167 + L2 LINE L2 2994 3308 -5 228 314 25 42 chr20 34704730 34704848 -37449034 - L2 LINE L2 -39 3274 3159 457 219 149 0 chr20 34705142 34705256 -37448626 + FLAM_C SINE Alu 1 131 -2 1680 152 62 3 chr20 34705265 34705555 -37448327 + AluJo SINE Alu 1 307 -5 382 255 231 19 chr20 34705612 34705820 -37448062 - MER102a DNA MER1_type 0 330 79 1249 247 80 63 chr20 34705820 34706004 -37447878 + L2 LINE L2 2520 2699 -614 1929 118 16 30 chr20 34706004 34706174 -37447708 - AluSx SINE Alu -11 301 130 180 111 0 0 chr20 34706174 34706201 -37447681 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2121 88 0 11 chr20 34706201 34706484 -37447398 - AluSc SINE Alu -29 280 1 1929 118 16 30 chr20 34706484 34706617 -37447265 - AluSx SINE Alu -180 132 1 1249 247 80 63 chr20 34706617 34707226 -37446656 + L2 LINE L2 2699 3308 -5 1760 132 62 0 chr20 34707807 34708115 -37445767 + AluSx SINE Alu 1 312 0 365 290 26 0 chr20 34708406 34708519 -37445363 + MIR SINE MIR 30 147 -61 908 189 0 0 chr20 34708520 34708684 -37445198 - FRAM SINE Alu -12 164 1 1865 100 0 0 chr20 34708697 34708948 -37444934 - AluSx SINE Alu -13 299 49 2105 111 0 7 chr20 34708984 34709282 -37444600 - AluSx SINE Alu -16 296 1 593 302 77 70 chr20 34709321 34709393 -37444489 + L2 LINE L2 2590 2660 -612 2363 78 3 0 chr20 34709393 34709699 -37444183 - AluSp SINE Alu -6 307 1 593 302 77 70 chr20 34709699 34710290 -37443592 + L2 LINE L2 2660 3270 -2 368 271 138 44 chr20 34710425 34710481 -37443401 + L1ME4a LINE L1 5896 5945 -176 1876 129 0 11 chr20 34710481 34710761 -37443121 + AluSx SINE Alu 34 310 -2 368 271 138 44 chr20 34710761 34710907 -37442975 + L1ME4a LINE L1 5945 6117 -4 2702 7 0 0 chr20 34710914 34711214 -37442668 + AluYa5 SINE Alu 1 300 -11 301 263 13 0 chr20 34711405 34711481 -37442401 + MIR SINE MIR 64 140 -122 256 203 29 14 chr20 34711714 34711783 -37442099 + L1MC/D LINE L1 5680 5749 -2059 2466 64 0 3 chr20 34711784 34712096 -37441786 + AluY SINE Alu 1 311 0 407 333 24 12 chr20 34712193 34712358 -37441524 + MIR SINE MIR 10 176 -86 274 229 167 0 chr20 34712355 34712451 -37441431 - L2 LINE L2 0 3313 3202 * 2183 120 0 0 chr20 34712451 34712751 -37441131 - AluSx SINE Alu -12 300 1 531 231 184 0 chr20 34712751 34712898 -37440984 - MIR SINE MIR -44 218 45 248 255 157 29 chr20 34712926 34713028 -37440854 + L2 LINE L2 3188 3302 -11 181 162 54 0 chr20 34712995 34713032 -37440850 + MIR SINE MIR 223 261 -1 * 199 186 35 139 chr20 34713281 34713367 -37440515 - MIR3 SINE MIR -40 168 92 1958 78 22 11 chr20 34714288 34714558 -37439324 - AluSx SINE Alu -26 286 14 1143 278 71 27 chr20 34714579 34714906 -37438976 + L2 LINE L2 2770 3126 -187 2110 119 3 3 chr20 34714906 34715209 -37438673 - AluSg SINE Alu -7 303 1 1143 278 71 27 chr20 34715209 34715397 -37438485 + L2 LINE L2 3126 3304 -9 923 91 15 8 chr20 34715767 34715899 -37437983 + AluSq/x SINE Alu 1 133 -179 1625 126 49 4 chr20 34715944 34716207 -37437675 + AluJb SINE Alu 11 285 -27 1704 132 7 4 chr20 34716235 34716507 -37437375 + AluJb SINE Alu 1 273 -39 2499 53 0 0 chr20 34716512 34716813 -37437069 - AluY SINE Alu -10 301 1 2350 91 3 0 chr20 34717380 34717689 -37436193 + AluSx SINE Alu 1 310 -2 1149 124 0 0 chr20 34717690 34717859 -37436023 + AluSg/x SINE Alu 126 294 -16 1918 115 0 7 chr20 34718316 34718594 -37435288 - AluSx SINE Alu -1 311 36 1910 104 0 52 chr20 34718614 34718923 -37434959 - AluSg SINE Alu -17 293 1 1870 102 71 0 chr20 34718949 34719242 -37434640 - AluSx SINE Alu 0 312 1 589 122 56 28 chr20 34719243 34719350 -37434532 - MLT1B LTR MaLR -280 110 1 233 179 0 0 chr20 34719888 34719927 -37433955 - Alu SINE Alu -11 297 259 1489 140 4 4 chr20 34719979 34720215 -37433667 - AluSx SINE Alu -76 236 1 936 95 24 0 chr20 34720340 34720466 -37433416 + AluY SINE Alu 1 129 -182 703 252 161 24 chr20 34720529 34720870 -37433012 + L2 LINE L2 2925 3312 -1 1948 140 7 0 chr20 34720918 34721226 -37432656 + AluSx SINE Alu 1 310 -2 794 158 0 8 chr20 34721495 34721628 -37432254 - FLAM_C SINE Alu 0 133 2 1534 202 31 57 chr20 34721807 34722262 -37431620 - LTR47B LTR ERVL 0 443 1 498 186 0 0 chr20 34722350 34722436 -37431446 - AluJ/FLAM SINE Alu -226 86 1 2801 133 18 70 chr20 34722632 34723117 -37430765 + MER31A LTR ERV1 1 510 25 1550 177 9 38 chr20 34723117 34723434 -37430448 - AluJb SINE Alu -2 310 3 2206 84 3 40 chr20 34723442 34723764 -37430118 - AluSp SINE Alu -3 310 1 2801 133 18 70 chr20 34723764 34723781 -37430101 + MER31A LTR ERV1 469 485 0 1685 166 7 0 chr20 34723875 34724159 -37429723 - AluJo SINE Alu -25 287 2 2219 85 7 0 chr20 34724200 34724495 -37429387 - AluSg SINE Alu -13 297 1 224 308 13 39 chr20 34724537 34724615 -37429267 + L2 LINE L2 3196 3271 -1 1017 147 5 32 chr20 34724815 34725005 -37428877 + AluJo SINE Alu 7 191 -121 212 254 5 79 chr20 34725702 34725891 -37427991 + (CGGGG)n Simple_repeat Simple_repeat 2 176 0 2148 94 0 14 chr20 34726607 34726769 -37427113 - AluSx SINE Alu -17 295 137 2177 65 0 59 chr20 34726769 34727092 -37426790 - AluY SINE Alu -7 304 1 2148 94 0 14 chr20 34727092 34727226 -37426656 - AluSx SINE Alu -175 137 3 453 337 84 7 chr20 34727842 34728127 -37425755 - L2 LINE L2 -541 2773 2467 2050 128 0 3 chr20 34728264 34728561 -37425321 - AluSx SINE Alu -16 296 1 186 43 0 0 chr20 34728572 34728595 -37425287 + (TTTAA)n Simple_repeat Simple_repeat 3 25 0 1957 110 14 3 chr20 34728595 34728885 -37424997 - AluSx SINE Alu -19 293 1 1518 179 61 0 chr20 34728889 34729169 -37424713 - AluJo SINE Alu -11 301 5 2159 166 104 17 chr20 34729181 34729662 -37424220 - L1MD1 LINE L1 -2 6240 5718 1569 103 0 0 chr20 34729814 34730037 -37423845 + LTR8A LTR ERV1 1 223 -504 1283 94 6 6 chr20 34730079 34730259 -37423623 - AluSg/x SINE Alu -46 264 85 1669 162 67 80 chr20 34730683 34730850 -37423032 - LTR8A LTR ERV1 0 727 559 2228 103 0 0 chr20 34730850 34731176 -37422706 - AluY SINE Alu 0 311 1 1669 162 67 80 chr20 34731176 34731409 -37422473 - LTR8A LTR ERV1 -168 559 332 2250 97 3 0 chr20 34731411 34731709 -37422173 + AluSp SINE Alu 1 299 -14 787 180 0 0 chr20 34731713 34731841 -37422041 + FLAM_C SINE Alu 2 129 -14 2255 106 9 0 chr20 34731843 34732182 -37421700 - LTR8A LTR ERV1 -385 342 1 2134 89 0 0 chr20 34732519 34732823 -37421059 - AluSg1 SINE Alu 0 304 1 1474 270 52 44 chr20 34733260 34733427 -37420455 - MLT1J LTR MaLR -2 509 345 2217 89 3 0 chr20 34733427 34733719 -37420163 - AluSq SINE Alu -20 293 1 1474 270 52 44 chr20 34733719 34734054 -37419828 - MLT1J LTR MaLR -166 345 3 1493 184 3 33 chr20 34734059 34734363 -37419519 - AluJb SINE Alu -17 295 1 2166 116 3 3 chr20 34734949 34735260 -37418622 - AluSx SINE Alu -1 311 1 496 283 35 0 chr20 34735356 34735501 -37418381 + MIR SINE MIR 35 184 -78 426 261 158 30 chr20 34735532 34735735 -37418147 - MLT1J LTR MaLR -50 461 233 2259 77 3 3 chr20 34735750 34736050 -37417832 - AluSg SINE Alu -10 300 1 229 143 0 0 chr20 34736051 34736086 -37417796 - Alu SINE Alu -183 120 86 936 200 4 65 chr20 34736086 34736316 -37417566 - AluJo SINE Alu -92 220 5 386 284 80 34 chr20 34736320 34736496 -37417386 - MLT1J LTR MaLR -286 225 42 545 153 8 93 chr20 34736500 34736579 -37417303 + FAM SINE Alu 74 158 -163 2241 100 0 3 chr20 34736579 34736888 -37416994 - AluSq SINE Alu -5 308 1 2162 101 7 13 chr20 34736891 34737197 -37416685 - AluSx SINE Alu -7 305 2 545 153 8 93 chr20 34737197 34737231 -37416651 + FAM SINE Alu 160 181 -4 435 333 129 29 chr20 34737365 34737560 -37416322 - L2 LINE L2 -1 3271 3032 2198 107 0 3 chr20 34737560 34737868 -37416014 + AluSq SINE Alu 6 312 -1 435 333 129 29 chr20 34737868 34737981 -37415901 - L2 LINE L2 -240 3032 2932 2266 94 0 0 chr20 34738148 34738447 -37415435 - AluSx SINE Alu -13 299 1 536 236 9 0 chr20 34738865 34738975 -37414907 - L2 LINE L2 0 3272 3162 24 0 0 0 chr20 34739176 34739200 -37414682 + AT_rich Low_complexity Low_complexity 1 24 0 1824 253 87 32 chr20 34739306 34739485 -37414397 - L2 LINE L2 -337 2977 2809 2487 43 3 0 chr20 34739485 34739784 -37414098 - AluY SINE Alu -11 300 1 2205 96 0 7 chr20 34739784 34740087 -37413795 - AluSc SINE Alu -8 301 1 1824 253 87 32 chr20 34740087 34740656 -37413226 - L2 LINE L2 -504 2810 2187 2934 7 0 0 chr20 34740889 34741198 -37412684 + AluYa5 SINE Alu 1 309 -2 1984 109 69 0 chr20 34741269 34741544 -37412338 - AluSx SINE Alu -13 299 6 2475 78 0 0 chr20 34741632 34741925 -37411957 - AluSc SINE Alu -16 293 1 1123 120 6 13 chr20 34742065 34742223 -37411659 - AluJb SINE Alu -155 157 1 475 265 15 8 chr20 34742223 34742355 -37411527 - MIR SINE MIR -110 152 20 216 189 0 0 chr20 34742396 34742433 -37411449 + (CA)n Simple_repeat Simple_repeat 1 37 0 2170 125 0 14 chr20 34742856 34743152 -37410730 - AluSx SINE Alu -20 292 1 1087 70 0 56 chr20 34743152 34743295 -37410587 - AluSq/x SINE Alu -178 135 1 2337 111 10 0 chr20 34743299 34743605 -37410277 - AluSx SINE Alu -3 309 1 699 177 0 8 chr20 34743687 34743811 -37410071 - FLAM_C SINE Alu -19 124 2 1781 152 0 55 chr20 34744025 34744200 -37409682 - AluJo SINE Alu -19 293 141 2376 98 0 0 chr20 34744200 34744496 -37409386 - AluSq SINE Alu -17 296 1 1781 152 0 55 chr20 34744496 34744629 -37409253 - AluJo SINE Alu -171 141 2 444 312 21 11 chr20 34744634 34744823 -37409059 - L1ME LINE L1 -297 5824 5634 1254 228 61 109 chr20 34744837 34745115 -37408767 - MER68 LTR ERV1 -15 547 303 1783 145 28 14 chr20 34745115 34745424 -37408458 - AluJb SINE Alu 0 313 1 1254 228 61 109 chr20 34745424 34745666 -37408216 - MER68 LTR ERV1 -259 303 51 280 173 19 0 chr20 34746124 34746176 -37407706 - MER68 LTR ERV1 -507 55 3 2408 82 13 0 chr20 34746198 34746503 -37407379 - AluY SINE Alu -2 309 1 198 206 0 0 chr20 34746772 34746840 -37407042 + (CCA)n Simple_repeat Simple_repeat 2 69 0 303 209 109 36 chr20 34747046 34747156 -37406726 - L2 LINE L2 -25 3288 3171 1289 227 183 29 chr20 34747349 34747825 -37406057 - MLT1H LTR MaLR 0 549 1 2239 107 3 10 chr20 34748501 34748800 -37405082 - AluSx SINE Alu -15 297 1 276 200 17 0 chr20 34748821 34748881 -37405001 - LTR33A LTR ERVL 0 523 463 726 142 15 30 chr20 34748883 34749017 -37404865 - FLAM_C SINE Alu -1 132 1 2068 157 0 3 chr20 34749144 34749449 -37404433 - AluJb SINE Alu -8 304 1 1782 172 0 0 chr20 34749496 34749769 -37404113 + AluJb SINE Alu 1 273 -39 2430 109 0 3 chr20 34749911 34750223 -37403659 - AluSx SINE Alu -1 311 1 1064 226 26 0 chr20 34750278 34750512 -37403370 - MIR SINE MIR 0 262 23 1306 267 70 53 chr20 34750986 34751473 -37402409 - MLT1J LTR MaLR -14 497 3 521 242 46 50 chr20 34751814 34752064 -37401818 - L2 LINE L2 -307 3006 2738 2351 86 3 0 chr20 34752849 34753139 -37400743 - AluSp SINE Alu -22 291 1 591 266 78 0 chr20 34753142 34753313 -37400569 - MER113 DNA MER1_type? -43 478 285 372 43 0 0 chr20 34753313 34753359 -37400523 + (GA)n Simple_repeat Simple_repeat 1 46 0 591 266 78 0 chr20 34753359 34753405 -37400477 - MER113 DNA MER1_type? -236 285 244 916 199 73 34 chr20 34753406 34753612 -37400270 - MER20 DNA MER1_type 0 219 6 953 150 4 97 chr20 34753631 34753676 -37400206 + MER3 DNA MER1_type 4 52 -157 2378 109 0 0 chr20 34753676 34753978 -37399904 + AluSx SINE Alu 1 302 -10 953 150 4 97 chr20 34753978 34754101 -37399781 + MER3 DNA MER1_type 52 148 -61 2217 134 0 0 chr20 34754101 34754399 -37399483 - AluJb SINE Alu -14 298 1 953 150 4 97 chr20 34754399 34754456 -37399426 + MER3 DNA MER1_type 148 209 0 869 218 0 0 chr20 34754539 34754704 -37399178 - FRAM SINE Alu -1 175 11 252 180 99 54 chr20 34754705 34754776 -37399106 - MER113 DNA MER1_type? -392 129 54 553 263 32 55 chr20 34754776 34754821 -37399061 - MLT1L LTR MaLR 0 615 570 2282 114 3 0 chr20 34754821 34755119 -37398763 - AluSx SINE Alu -13 299 1 553 263 32 55 chr20 34755119 34755290 -37398592 - MLT1L LTR MaLR -45 570 404 368 190 0 38 chr20 34755673 34755752 -37398130 + MIR SINE MIR 74 149 -113 428 277 25 8 chr20 34755761 34755880 -37398002 - MER117 DNA MER1_type -1 196 76 632 168 37 0 chr20 34755888 34755995 -37397887 - Tigger7 DNA MER2_type -621 112 2 359 228 101 47 chr20 34755995 34756027 -37397855 + L1MC4 LINE L1 7037 7066 -976 183 80 0 0 chr20 34756027 34756052 -37397830 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 359 228 101 47 chr20 34756052 34756072 -37397810 + L1MC4 LINE L1 7066 7083 -959 3059 58 0 2 chr20 34756072 34756472 -37397410 - L1PA8 LINE L1 0 6172 5774 359 228 101 47 chr20 34756472 34756567 -37397315 + L1MC4 LINE L1 7083 7193 -849 673 245 0 50 chr20 34756567 34756726 -37397156 + Tigger3(Golem) DNA MER2_type 1 2577 -452 595 195 6 69 chr20 34756743 34756861 -37397021 - L1PB4 LINE L1 -11 6145 6038 2057 150 7 0 chr20 34756861 34757154 -37396728 - AluSx SINE Alu -17 295 1 595 195 6 69 chr20 34757154 34757194 -37396688 - L1PB4 LINE L1 -118 6038 5997 304 167 0 0 chr20 34757403 34757457 -37396425 - MER33 DNA MER1_type 0 324 271 889 112 9 0 chr20 34757457 34757573 -37396309 + AluJb SINE Alu 1 117 -195 2570 52 0 10 chr20 34757576 34757882 -37396000 - AluY SINE Alu -8 303 1 272 86 99 49 chr20 34757951 34758032 -37395850 - MER33 DNA MER1_type -46 317 233 377 256 49 0 chr20 34758035 34758117 -37395765 + L1MC4 LINE L1 6615 6700 -1342 836 66 0 0 chr20 34758117 34758223 -37395659 - AluSg/x SINE Alu -1 311 206 713 189 80 40 chr20 34758223 34758362 -37395520 - MER33 DNA MER1_type -2375 210 59 1778 172 10 17 chr20 34758362 34758681 -37395201 - AluJo SINE Alu 0 312 3 713 189 80 40 chr20 34758681 34758742 -37395140 - MER33 DNA MER1_type -2526 59 2 1879 160 6 29 chr20 34758921 34759233 -37394649 - AluJb SINE Alu -7 305 1 264 167 19 19 chr20 34759294 34759348 -37394534 - L2 LINE L2 -1 3271 3218 2374 96 0 7 chr20 34759435 34759738 -37394144 - AluSq SINE Alu -10 303 3 2143 130 0 0 chr20 34759750 34760050 -37393832 - AluSx SINE Alu -12 300 1 580 102 23 0 chr20 34760937 34761025 -37392857 - AluSg/x SINE Alu -14 296 207 * 729 99 10 0 chr20 34761023 34761124 -37392758 - AluS SINE Alu -211 102 1 526 251 97 100 chr20 34761298 34761668 -37392214 - MLT1J LTR MaLR -23 488 120 2219 112 7 0 chr20 34761682 34761978 -37391904 - AluSx SINE Alu -14 298 1 2034 145 3 0 chr20 34761982 34762278 -37391604 - AluSx SINE Alu -15 297 1 891 252 11 18 chr20 34762390 34762664 -37391218 - LTR37B LTR ERV1 0 468 197 317 203 76 38 chr20 34762804 34762883 -37390999 + MER5A DNA MER1_type 1 82 -107 234 232 0 0 chr20 34762907 34762963 -37390919 + G-rich Low_complexity Low_complexity 1 56 0 374 189 0 27 chr20 34763015 34763089 -37390793 - LTR37B LTR ERV1 -390 78 7 2321 98 0 0 chr20 34763184 34763471 -37390411 + AluSx SINE Alu 1 287 -25 654 139 74 25 chr20 34764255 34764377 -37389505 + FLAM_C SINE Alu 2 129 -14 2500 72 0 7 chr20 34764394 34764700 -37389182 + AluY SINE Alu 1 304 -7 2148 120 20 3 chr20 34764802 34765101 -37388781 - AluJb SINE Alu -8 304 1 2047 129 20 3 chr20 34765289 34765591 -37388291 + AluJo SINE Alu 1 307 -5 286 355 108 0 chr20 34766125 34766356 -37387526 - L2 LINE L2 -213 3059 2804 421 247 198 12 chr20 34766643 34766805 -37387077 - MIR SINE MIR -21 241 50 815 269 33 25 chr20 34767003 34767248 -37386634 + MIR SINE MIR 6 252 -10 265 284 23 0 chr20 34767269 34767357 -37386525 - MLT1J LTR MaLR 0 511 422 2081 114 0 56 chr20 34767553 34767877 -37386005 + AluSx SINE Alu 1 306 -6 317 280 120 51 chr20 34767888 34768063 -37385819 - L1ME4a LINE L1 0 6121 5935 365 247 100 66 chr20 34768182 34768241 -37385641 - L1MC4a LINE L1 -202 5919 5863 1827 148 72 0 chr20 34768241 34768518 -37385364 + AluJb SINE Alu 1 297 -15 365 247 100 66 chr20 34768518 34768754 -37385128 - L1MC4a LINE L1 -258 5863 5613 2318 96 3 3 chr20 34768763 34769064 -37384818 - AluY SINE Alu -10 301 1 22 35 0 0 chr20 34769064 34769093 -37384789 + AT_rich Low_complexity Low_complexity 1 29 0 1919 167 0 0 chr20 34769268 34769555 -37384327 - AluJo SINE Alu -25 287 1 31 0 0 0 chr20 34769610 34769641 -37384241 + AT_rich Low_complexity Low_complexity 1 31 0 1865 156 0 46 chr20 34769641 34769948 -37383934 - AluJb SINE Alu -19 293 1 1951 151 10 0 chr20 34769948 34770240 -37383642 - AluJb SINE Alu -17 295 1 1213 182 170 0 chr20 34770242 34770377 -37383505 - AluJo SINE Alu -16 296 185 189 0 0 0 chr20 34770377 34770398 -37383484 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 1213 182 170 0 chr20 34770398 34770515 -37383367 - AluJo SINE Alu -127 185 1 1999 195 15 73 chr20 34770515 34770593 -37383289 - L1MC4 LINE L1 -209 7833 7752 1882 167 0 29 chr20 34770593 34770905 -37382977 + AluJb SINE Alu 7 309 -3 2385 97 3 3 chr20 34770908 34771218 -37382664 + AluSx SINE Alu 1 310 -2 1999 195 15 73 chr20 34771218 34771657 -37382225 - L1MC4 LINE L1 -292 7750 7342 2379 109 0 3 chr20 34771853 34772166 -37381716 - AluSx SINE Alu 0 312 1 2748 117 5 7 chr20 34772556 34772985 -37380897 - MSTA LTR MaLR 0 428 1 2385 106 0 0 chr20 34773004 34773306 -37380576 - AluSx SINE Alu -10 302 1 1119 249 82 18 chr20 34773508 34773959 -37379923 - L2 LINE L2 -114 3199 2778 2428 92 0 7 chr20 34773959 34774265 -37379617 - AluSx SINE Alu -8 304 1 1661 176 36 30 chr20 34774265 34774567 -37379315 - AluJo SINE Alu -8 304 1 1119 249 82 18 chr20 34774567 34774742 -37379140 - L2 LINE L2 -534 2779 2532 1913 146 66 0 chr20 34775247 34775535 -37378347 - AluJb SINE Alu -5 307 1 878 152 8 0 chr20 34775538 34775663 -37378219 - AluJo/FLAM SINE Alu -186 126 1 614 223 73 90 chr20 34775707 34776008 -37377874 - L1MC5 LINE L1 -312 7649 7354 295 343 169 12 chr20 34776117 34776289 -37377593 - MIR SINE MIR 0 262 64 2151 107 7 0 chr20 34776429 34776743 -37377139 + AluSp SINE Alu 1 316 0 325 326 61 0 chr20 34776962 34777094 -37376788 - L2 LINE L2 -211 3061 2922 424 233 27 34 chr20 34777454 34777600 -37376282 + CT-rich Low_complexity Low_complexity 3 147 0 634 228 7 28 chr20 34777611 34778070 -37375812 + C-rich Low_complexity Low_complexity 1 448 0 2381 97 3 3 chr20 34778162 34778471 -37375411 - AluSq SINE Alu -4 309 1 21 36 0 0 chr20 34778612 34778640 -37375242 + AT_rich Low_complexity Low_complexity 1 28 0 381 214 41 20 chr20 34778768 34778866 -37375016 + MER112 DNA MER1_type 17 116 -144 2155 126 20 0 chr20 34778891 34779192 -37374690 - AluSx SINE Alu -5 307 1 342 251 112 65 chr20 34779508 34779583 -37374299 - L1MC/D LINE L1 -1988 5820 5750 1954 101 109 7 chr20 34779583 34779859 -37374023 - AluSg SINE Alu -6 304 1 342 251 112 65 chr20 34779859 34779998 -37373884 - L1MC/D LINE L1 -2058 5750 5596 838 153 6 6 chr20 34779998 34780155 -37373727 + L1MB3 LINE L1 6025 6181 -2 2341 114 3 0 chr20 34780243 34780549 -37373333 + AluSx SINE Alu 2 308 -4 324 299 8 26 chr20 34780860 34780977 -37372905 - L1MC4a LINE L1 -1910 5898 5784 407 300 29 24 chr20 34781226 34781396 -37372486 + MIR SINE MIR 26 196 -66 274 287 54 23 chr20 34781473 34781602 -37372280 + L2 LINE L2 2458 2590 -724 537 239 143 18 chr20 34781605 34781690 -37372192 + L2 LINE L2 2700 2773 -540 2330 100 0 19 chr20 34781690 34781999 -37371883 + AluSx SINE Alu 1 303 -9 537 239 143 18 chr20 34781999 34782249 -37371633 + L2 LINE L2 2773 3073 -240 1623 133 125 0 chr20 34782634 34782898 -37370984 - AluSx SINE Alu -5 297 1 201 235 224 31 chr20 34783290 34783388 -37370494 - L2 LINE L2 -34 3238 3122 1045 153 27 68 chr20 34783583 34783628 -37370254 - MER20 DNA MER1_type 0 219 174 2317 93 3 7 chr20 34783628 34783929 -37369953 - AluSx SINE Alu -12 300 1 1045 153 27 68 chr20 34783929 34784105 -37369777 - MER20 DNA MER1_type -45 174 7 370 250 97 18 chr20 34784243 34784482 -37369400 - L2 LINE L2 -294 3019 2761 852 258 19 0 chr20 34785598 34785811 -37368071 + MIR SINE MIR 36 252 -10 2323 117 0 0 chr20 34785963 34786263 -37367619 + AluSx SINE Alu 1 300 -12 1114 158 0 27 chr20 34786263 34786447 -37367435 + AluJb SINE Alu 134 312 0 570 260 32 7 chr20 34787230 34787384 -37366498 - MIR SINE MIR -92 170 13 2247 109 0 13 chr20 34787548 34787852 -37366030 + AluSq SINE Alu 1 300 -13 368 186 59 49 chr20 34788003 34788105 -37365777 - MIR SINE MIR -100 162 60 1870 90 23 30 chr20 34788161 34788465 -37365417 + AluSc SINE Alu 27 309 0 1910 118 15 90 chr20 34788599 34788931 -37364951 + AluSx SINE Alu 3 309 -3 669 255 22 5 chr20 34788931 34789115 -37364767 + MIR SINE MIR 22 208 -54 322 314 51 0 chr20 34789230 34789348 -37364534 + L1M4 LINE L1 4072 4195 -1951 2056 127 0 7 chr20 34789448 34789766 -37364116 + AluSg SINE Alu 1 316 0 653 250 121 8 chr20 34789767 34790023 -37363859 + L2 LINE L2 3028 3312 -1 598 257 96 54 chr20 34790620 34791043 -37362839 - L2 LINE L2 0 3313 2705 309 183 0 0 chr20 34791064 34791124 -37362758 + (TATATG)n Simple_repeat Simple_repeat 6 65 0 2081 129 28 0 chr20 34791152 34791439 -37362443 - AluSx SINE Alu -17 295 1 294 310 23 0 chr20 34791443 34791530 -37362352 - L2 LINE L2 -602 2712 2624 2011 169 164 2 chr20 34791531 34791963 -37361919 - MLT1D LTR MaLR -1 504 3 794 186 0 0 chr20 34791963 34792103 -37361779 - L2 LINE L2 -686 2628 2489 719 218 166 26 chr20 34792526 34792755 -37361127 + MIR SINE MIR 2 262 0 504 266 72 48 chr20 34792762 34792900 -37360982 + MIR SINE MIR 51 197 -65 2009 138 0 0 chr20 34792900 34793204 -37360678 + AluJb SINE Alu 1 304 -8 504 266 72 48 chr20 34793204 34793272 -37360610 + MIR SINE MIR 197 262 0 213 286 286 0 chr20 34793376 34793460 -37360422 - MIR SINE MIR -108 154 47 2313 65 10 19 chr20 34793530 34793837 -37360045 + AluSq SINE Alu 1 304 -9 1355 135 166 15 chr20 34793846 34794105 -37359777 + AluSg SINE Alu 1 298 -2 1248 153 4 69 chr20 34794105 34794143 -37359739 - L1MB5 LINE L1 -9 6165 6126 2095 106 3 10 chr20 34794143 34794446 -37359436 + AluSx SINE Alu 1 301 -11 1248 153 4 69 chr20 34794446 34794668 -37359214 - L1MB5 LINE L1 -48 6126 5922 1725 138 0 38 chr20 34794682 34794973 -37358909 - AluJo SINE Alu -32 280 1 4528 195 41 11 chr20 34794973 34795942 -37357940 - L1M4 LINE L1 -1195 4951 3950 197 33 33 0 chr20 34795942 34795972 -37357910 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 4528 195 41 11 chr20 34795972 34795993 -37357889 - L1M4 LINE L1 -2196 3950 3931 2215 82 14 0 chr20 34796091 34796385 -37357497 - AluSp SINE Alu -15 298 1 437 223 32 11 chr20 34796440 34796534 -37357348 + MIR SINE MIR 78 173 -89 1707 180 3 3 chr20 34796639 34796950 -37356932 - AluJo SINE Alu -1 311 1 1964 122 0 7 chr20 34796957 34797285 -37356597 - AluSx SINE Alu 0 326 1 1087 217 89 51 chr20 34797296 34797632 -37356250 - L1ME3 LINE L1 -1 6161 5813 483 261 6 83 chr20 34797792 34797871 -37356011 - MER117 DNA MER1_type -3 194 135 1796 162 3 0 chr20 34797871 34798168 -37355714 - AluJo SINE Alu -14 298 1 483 261 6 83 chr20 34798168 34798268 -37355614 - MER117 DNA MER1_type -62 135 29 2081 147 11 40 chr20 34798269 34798644 -37355238 + THE1B LTR MaLR 1 364 0 2399 56 0 3 chr20 34799414 34799720 -37354162 - AluY SINE Alu -1 310 6 436 269 145 51 chr20 34800052 34800286 -37353596 - MIR SINE MIR 0 262 7 232 218 0 18 chr20 34800305 34800360 -37353522 - L2 LINE L2 -287 2985 2932 353 264 39 62 chr20 34800374 34800464 -37353418 + MIR SINE MIR 98 186 -76 2269 93 0 0 chr20 34800464 34800764 -37353118 - AluSg SINE Alu -10 300 1 353 264 39 62 chr20 34800764 34800802 -37353080 + MIR SINE MIR 186 223 -39 5118 134 31 32 chr20 34800868 34801390 -37352492 - Tigger7 DNA MER2_type 0 2487 1966 1821 164 0 3 chr20 34801390 34801688 -37352194 - AluJb SINE Alu -15 297 1 5118 134 31 32 chr20 34801688 34801704 -37352178 - Tigger7 DNA MER2_type -521 1966 1951 2109 120 13 0 chr20 34801704 34802005 -37351877 - AluSx SINE Alu -7 305 1 5118 134 31 32 chr20 34802005 34802339 -37351543 - Tigger7 DNA MER2_type -536 1951 1615 1829 159 3 0 chr20 34802354 34802650 -37351232 - AluJo SINE Alu -15 297 1 2337 60 0 3 chr20 34802659 34802957 -37350925 - AluY SINE Alu -14 297 1 2484 36 0 10 chr20 34802957 34803261 -37350621 - AluY SINE Alu -10 301 1 2055 112 0 42 chr20 34803268 34803580 -37350302 - AluSq SINE Alu -14 299 1 3966 154 47 87 chr20 34803582 34804418 -37349464 - Tigger7 DNA MER2_type -1685 802 1 313 253 7 34 chr20 34804831 34804951 -37348931 + G-rich Low_complexity Low_complexity 6 123 -24 291 28 0 0 chr20 34804951 34804987 -37348895 + (CCGAG)n Simple_repeat Simple_repeat 3 38 0 313 253 7 34 chr20 34804987 34805012 -37348870 + G-rich Low_complexity Low_complexity 123 147 0 392 292 89 12 chr20 34805714 34805882 -37348000 + MIR3 SINE MIR 12 192 -16 207 196 87 0 chr20 34806260 34806306 -37347576 + MIR SINE MIR 67 116 -92 208 211 0 0 chr20 34806325 34806363 -37347519 + L2 LINE L2 3261 3298 -15 627 304 137 21 chr20 34806421 34807103 -37346779 - L2 LINE L2 -10 3303 2540 2156 99 0 0 chr20 34807268 34807586 -37346296 - AluSg SINE Alu 0 318 1 1396 174 60 30 chr20 34808200 34808499 -37345383 - AluJo SINE Alu -4 308 1 608 268 132 0 chr20 34808648 34808838 -37345044 + MIR SINE MIR 47 261 -1 337 275 54 62 chr20 34808848 34809106 -37344776 - L2 LINE L2 -685 2629 2374 450 269 59 8 chr20 34809147 34809266 -37344616 + L2 LINE L2 3147 3271 -1 255 203 68 0 chr20 34809265 34809324 -37344558 - MIR SINE MIR -86 176 114 * 205 305 42 32 chr20 34809426 34809521 -37344361 - L2 LINE L2 -5 3267 3172 288 333 44 9 chr20 34809729 34809843 -37344039 - L2 LINE L2 0 3313 3196 216 276 46 23 chr20 34809857 34809944 -37343938 + MIR SINE MIR 151 239 -23 562 286 42 21 chr20 34811505 34811694 -37342188 + MIR SINE MIR 41 233 -29 493 281 38 71 chr20 34811918 34812128 -37341754 - L3 LINE CR1 -42 1535 1333 566 281 82 63 chr20 34812267 34812463 -37341419 - L3 LINE CR1 -257 1320 1116 2239 95 0 7 chr20 34812463 34812767 -37341115 - AluSx SINE Alu -10 302 1 566 281 82 63 chr20 34812767 34812840 -37341042 - L3 LINE CR1 -461 1116 1046 415 357 7 0 chr20 34813220 34813363 -37340519 + MIR SINE MIR 5 148 -114 330 226 267 75 chr20 34813388 34813441 -37340441 + MER5A DNA MER1_type 9 51 -138 2265 81 0 34 chr20 34813441 34813761 -37340121 + AluY SINE Alu 1 309 -2 330 226 267 75 chr20 34813761 34813853 -37340029 + MER5A DNA MER1_type 51 182 -7 274 310 70 49 chr20 34814006 34814148 -37339734 - L2 LINE L2 -4 3309 3165 2275 96 0 0 chr20 34814660 34814962 -37338920 + AluSx SINE Alu 1 302 -10 663 205 8 0 chr20 34815197 34815314 -37338568 + FLAM_C SINE Alu 1 118 -15 1576 172 19 25 chr20 34815366 34815680 -37338202 - AluJb SINE Alu 0 312 1 207 0 0 0 chr20 34815689 34815712 -37338170 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2089 96 0 4 chr20 34815720 34816000 -37337882 - AluSx SINE Alu -33 279 1 2220 95 20 3 chr20 34816337 34816643 -37337239 - AluY SINE Alu 0 311 1 258 330 53 0 chr20 34816761 34816855 -37337027 - MIR SINE MIR -52 210 112 1629 161 0 25 chr20 34816947 34817096 -37336786 - AluJo SINE Alu -33 279 139 1695 134 30 37 chr20 34817096 34817395 -37336487 - AluSx SINE Alu -15 297 1 1629 161 0 25 chr20 34817395 34817531 -37336351 - AluJo SINE Alu -173 139 1 224 262 159 90 chr20 34817745 34817890 -37335992 - MIR3 SINE MIR -49 159 5 1067 147 27 71 chr20 34818210 34818435 -37335447 - MER20 DNA MER1_type -1 218 4 217 311 107 19 chr20 34818507 34818610 -37335272 - MIR3 SINE MIR -11 197 86 370 292 80 29 chr20 34820751 34820888 -37332994 + MIR3 SINE MIR 57 200 -8 412 273 91 28 chr20 34821736 34821879 -37332003 - MIR3 SINE MIR -27 181 30 228 222 105 117 chr20 34822128 34822290 -37331592 + MIR SINE MIR 73 232 -30 483 177 81 24 chr20 34822330 34822454 -37331428 - L1ME3 LINE L1 -1 6161 6031 291 297 93 25 chr20 34822553 34822671 -37331211 - L2 LINE L2 -2 3270 3145 342 188 197 51 chr20 34823520 34823637 -37330245 - MIR3 SINE MIR -31 177 44 1386 193 32 98 chr20 34823930 34824330 -37329552 - MLT1A2 LTR MaLR 0 374 1 1520 192 7 7 chr20 34824489 34824651 -37329231 - AluJb SINE Alu -5 307 143 2044 79 55 17 chr20 34824651 34824941 -37328941 - AluSx SINE Alu -11 301 1 1520 192 7 7 chr20 34824941 34825085 -37328797 - AluJb SINE Alu -168 144 1 883 153 0 7 chr20 34825085 34825229 -37328653 - AluJo SINE Alu -169 143 1 1936 125 0 42 chr20 34826331 34826644 -37327238 - AluJo SINE Alu -12 300 1 388 353 106 28 chr20 34826802 34827264 -37326618 + L2 LINE L2 2378 2875 -439 201 239 107 122 chr20 34827336 34827533 -37326349 + L2 LINE L2 3067 3260 -12 698 232 98 21 chr20 34827573 34827858 -37326024 - L1MEc LINE L1 -2749 3466 3160 1058 157 25 60 chr20 34827858 34828093 -37325789 - AluJo SINE Alu -4 308 82 1062 204 72 0 chr20 34828093 34828348 -37325534 - L1MEc LINE L1 -3060 3155 2879 1983 112 23 10 chr20 34828348 34828651 -37325231 - AluSx SINE Alu -5 307 1 936 265 141 28 chr20 34828702 34829217 -37324665 - L1MEc LINE L1 -4826 1570 984 2325 126 86 20 chr20 34829217 34829622 -37324260 - MSTB1 LTR MaLR 0 432 1 936 265 141 28 chr20 34829622 34829675 -37324207 - L1MEc LINE L1 -5412 984 938 2015 242 60 24 chr20 34829809 34830388 -37323494 - L1MEc LINE L1 -5604 792 193 254 244 0 0 chr20 34830457 34830502 -37323380 - L1MEc LINE L1 -6314 82 38 345 308 135 19 chr20 34830507 34830663 -37323219 + MIR SINE MIR 46 219 -43 834 155 0 7 chr20 34830693 34830929 -37322953 + AluJb SINE Alu 2 305 -7 502 291 24 24 chr20 34831478 34831643 -37322239 - MIR3 SINE MIR -19 189 25 211 275 44 33 chr20 34831680 34831771 -37322111 + MIR SINE MIR 47 138 -124 766 263 37 71 chr20 34831861 34832158 -37321724 - MER102b DNA MER1_type -23 318 32 608 250 61 17 chr20 34833323 34833503 -37320379 + MIR SINE MIR 20 207 -55 1132 98 0 0 chr20 34833660 34833813 -37320069 + AluSg/x SINE Alu 142 294 -18 233 282 149 3 chr20 34833975 34834101 -37319781 - MIR SINE MIR -61 147 21 203 156 0 0 chr20 34834237 34834269 -37319613 + T-rich Low_complexity Low_complexity 4 35 0 401 230 11 11 chr20 34834355 34834442 -37319440 - MIR SINE MIR -30 232 146 366 288 34 51 chr20 34835504 34835681 -37318201 + MIR3 SINE MIR 33 206 -2 389 83 0 0 chr20 34835819 34835867 -37318015 - 5S rRNA rRNA -73 48 1 203 328 16 16 chr20 34837921 34837982 -37315900 - L2 LINE L2 -22 3250 3190 2230 84 0 3 chr20 34838317 34838614 -37315268 - AluY SINE Alu -15 296 1 221 304 116 18 chr20 34838663 34838775 -37315107 + MIR3 SINE MIR 11 133 -75 2126 90 0 20 chr20 34838877 34839176 -37314706 - AluSx SINE Alu -17 295 3 377 221 163 64 chr20 34839701 34839873 -37314009 + MIR SINE MIR 4 192 -70 1173 203 160 58 chr20 34840462 34840993 -37312889 - MER34C LTR ERV1 0 585 1 264 225 75 92 chr20 34841031 34841151 -37312731 + MIR3 SINE MIR 6 123 -85 379 305 8 0 chr20 34841329 34841447 -37312435 - L1ME LINE L1 -459 5662 5544 394 247 58 26 chr20 34842429 34842583 -37311299 - MIR3 SINE MIR -12 196 38 2382 103 6 3 chr20 34842872 34843183 -37310699 + AluSx SINE Alu 1 312 0 930 181 11 43 chr20 34843303 34843331 -37310551 + MER58A DNA MER1_type 37 64 -2356 1718 186 0 17 chr20 34843331 34843632 -37310250 - AluJo SINE Alu -16 296 1 930 181 11 43 chr20 34843632 34843791 -37310091 + MER58A DNA MER1_type 64 218 -6 275 224 136 56 chr20 34845296 34845421 -37308461 - L2 LINE L2 -1 3271 3137 840 161 52 104 chr20 34845971 34846201 -37307681 - MER20 DNA MER1_type 0 219 2 325 340 16 21 chr20 34848540 34848685 -37305197 + MIR3 SINE MIR 32 178 -30 2463 74 3 0 chr20 34848938 34849235 -37304647 - AluY SINE Alu -13 298 1 498 198 113 0 chr20 34849584 34849690 -37304192 - L2 LINE L2 -4 3309 3192 377 276 123 83 chr20 34849701 34849822 -37304060 - MLT1L LTR MaLR -89 526 411 1951 158 30 0 chr20 34849822 34850120 -37303762 - AluJo SINE Alu -5 307 1 377 276 123 83 chr20 34850120 34850502 -37303380 - MLT1L LTR MaLR -204 411 3 251 285 146 36 chr20 34850624 34850722 -37303160 - MER5A DNA MER1_type -5 184 98 2265 105 0 0 chr20 34850722 34851007 -37302875 + AluSx SINE Alu 7 291 -21 251 285 146 36 chr20 34851007 34851073 -37302809 - MER5A DNA MER1_type -91 98 2 196 206 0 29 chr20 34851685 34851753 -37302129 + GA-rich Low_complexity Low_complexity 3 68 0 1124 214 138 24 chr20 34851963 34852333 -37301549 - MLT1C LTR MaLR -50 417 6 193 196 125 0 chr20 34852522 34852578 -37301304 - L2 LINE L2 0 3272 3210 294 244 109 25 chr20 34852901 34853020 -37300862 - MIR3 SINE MIR -69 139 11 372 275 9 9 chr20 34853302 34853411 -37300471 - MIR SINE MIR -70 192 84 2424 73 3 17 chr20 34853851 34854153 -37299729 - AluSx SINE Alu -14 298 1 1176 169 11 0 chr20 34854168 34854352 -37299530 + AluJo SINE Alu 1 186 -126 180 0 0 0 chr20 34854748 34854768 -37299114 + (TG)n Simple_repeat Simple_repeat 1 20 0 238 309 9 18 chr20 34855253 34855363 -37298519 + GA-rich Low_complexity Low_complexity 4 112 0 219 321 88 15 chr20 34855477 34855614 -37298268 + L2 LINE L2 2933 3079 -193 30 0 0 0 chr20 34855912 34855942 -37297940 + AT_rich Low_complexity Low_complexity 1 30 0 306 291 29 29 chr20 34856968 34857071 -37296811 - L2 LINE L2 -202 3070 2968 439 189 0 0 chr20 34857099 34857173 -37296709 - MER47A DNA MER2_type 0 366 293 1063 170 17 100 chr20 34857177 34857418 -37296464 - AluJb SINE Alu -7 305 85 1678 146 14 7 chr20 34857418 34857712 -37296170 - MER47A DNA MER2_type -70 296 1 2407 116 0 0 chr20 34858519 34858830 -37295052 - AluSx SINE Alu -1 311 1 235 229 62 0 chr20 34858872 34858920 -37294962 + MIR3 SINE MIR 109 159 -49 404 252 40 46 chr20 34859164 34859315 -37294567 + Charlie8 DNA MER1_type 37 186 -2231 387 255 206 0 chr20 34859590 34859692 -37294190 - L2 LINE L2 0 3272 3150 222 277 170 53 chr20 34859783 34859877 -37294005 + MIR3 SINE MIR 90 194 -14 1562 162 4 32 chr20 34860077 34860355 -37293527 + AluJo SINE Alu 1 270 -42 2117 109 7 0 chr20 34861082 34861412 -37292470 + AluSg SINE Alu 5 336 0 1614 197 10 14 chr20 34861657 34861951 -37291931 + AluJo SINE Alu 1 293 -19 286 247 0 27 chr20 34861957 34862030 -37291852 - Charlie8 DNA MER1_type -2346 71 1 2462 82 3 3 chr20 34862772 34863076 -37290806 - AluSq SINE Alu -9 304 1 2293 71 0 7 chr20 34863076 34863357 -37290525 - AluSc SINE Alu -12 297 18 219 304 0 18 chr20 34863364 34863398 -37290484 - MIR SINE MIR -88 120 88 407 301 166 18 chr20 34863398 34863561 -37290321 + MIR SINE MIR 1 187 -75 1507 228 68 24 chr20 34863574 34863717 -37290165 + L1MC5 LINE L1 7339 7474 -487 1882 177 35 23 chr20 34863717 34864061 -37289821 - MER7A DNA MER2_type 0 346 1 1507 228 68 24 chr20 34864061 34864504 -37289378 + L1MC5 LINE L1 7474 7951 -10 1677 109 36 4 chr20 34864562 34864837 -37289045 + L1MC1 LINE L1 5696 5979 -354 449 253 97 0 chr20 34864840 34864994 -37288888 + MIR SINE MIR 94 262 0 2111 126 3 3 chr20 34865092 34865385 -37288497 - AluSc SINE Alu -16 293 1 297 272 53 59 chr20 34866556 34866675 -37287207 + L1ME LINE L1 5458 5577 -585 2844 13 0 0 chr20 34866675 34866979 -37286903 + AluYa5 SINE Alu 1 304 -7 297 272 53 59 chr20 34866979 34867028 -37286854 + L1ME LINE L1 5577 5625 -537 280 301 27 62 chr20 34867262 34867408 -37286474 - MIR SINE MIR -42 220 80 2379 80 0 3 chr20 34868547 34868846 -37285036 + AluY SINE Alu 1 298 -13 261 250 0 18 chr20 34869685 34869741 -37284141 - MIR3 SINE MIR -43 165 111 307 200 133 0 chr20 34870676 34870751 -37283131 - MIR3 SINE MIR -6 202 118 185 310 169 0 chr20 34870907 34870978 -37282904 + L2 LINE L2 3141 3223 -49 255 288 141 58 chr20 34871299 34871460 -37282422 + L2 LINE L2 2355 2501 -813 2276 110 23 10 chr20 34871460 34871768 -37282114 - AluSq SINE Alu 0 313 2 255 288 141 58 chr20 34871768 34871953 -37281929 + L2 LINE L2 2501 2730 -584 255 267 40 13 chr20 34872086 34872161 -37281721 + MIR SINE MIR 88 164 -98 290 273 28 142 chr20 34872191 34872444 -37281438 + L2 LINE L2 2935 3158 -114 209 208 62 0 chr20 34872578 34872626 -37281256 + L3 LINE CR1 1518 1568 -9 2098 117 3 3 chr20 34873198 34873489 -37280393 + AluSx SINE Alu 1 291 -21 1627 116 86 0 chr20 34873717 34873984 -37279898 + L1MB3 LINE L1 5887 6176 -7 741 275 42 29 chr20 34873995 34874235 -37279647 + MIR SINE MIR 20 262 0 295 153 255 20 chr20 34874247 34874345 -37279537 - MIR SINE MIR -50 212 93 185 340 50 64 chr20 34874385 34874526 -37279356 + MIR SINE MIR 59 197 -65 378 301 35 85 chr20 34874737 34874936 -37278946 + MIR3 SINE MIR 2 190 -18 429 217 210 13 chr20 34875620 34875777 -37278105 + MIR SINE MIR 65 252 -10 201 222 0 0 chr20 34876606 34876642 -37277240 + (CCG)n Simple_repeat Simple_repeat 2 37 0 207 235 0 20 chr20 34878052 34878103 -37275779 + L2 LINE L2 3019 3068 -245 1755 114 0 4 chr20 34878151 34878396 -37275486 - AluSx SINE Alu -13 299 56 413 204 23 53 chr20 34878477 34878609 -37275273 - LTR67 LTR ERVL -2 555 428 251 323 20 10 chr20 34878818 34878917 -37274965 - MLT1K LTR MaLR -340 248 149 2240 118 0 3 chr20 34879144 34879450 -37274432 + AluSx SINE Alu 1 305 -7 1830 151 13 13 chr20 34879507 34879805 -37274077 + AluJo SINE Alu 2 299 -13 552 214 60 0 chr20 34879937 34880054 -37273828 - Charlie8 DNA MER1_type -2257 160 37 476 214 159 8 chr20 34880140 34880266 -37273616 - MLT1H1 LTR MaLR -7 548 404 286 270 6 129 chr20 34880550 34880728 -37273154 - MIR3 SINE MIR -24 184 29 502 262 121 0 chr20 34880921 34881062 -37272820 + MIR SINE MIR 92 249 -13 188 33 0 33 chr20 34881241 34881271 -37272611 + (GGAA)n Simple_repeat Simple_repeat 4 32 0 2029 153 3 13 chr20 34882357 34882670 -37271212 - AluJo SINE Alu -2 310 1 1820 163 3 10 chr20 34882831 34883125 -37270757 - AluJb SINE Alu -20 292 1 951 243 75 0 chr20 34883176 34883402 -37270480 + MIR SINE MIR 20 262 0 393 204 11 32 chr20 34883416 34883509 -37270373 + MLT1K LTR MaLR 108 198 -390 351 175 16 0 chr20 34883779 34883842 -37270040 + MLT1H1 LTR MaLR 20 83 -459 2819 168 8 31 chr20 34883860 34883965 -37269917 - MER66A LTR ERV1 0 478 372 2161 117 14 0 chr20 34883965 34884256 -37269626 - AluSc SINE Alu -14 295 1 2819 168 8 31 chr20 34884256 34884639 -37269243 - MER66A LTR ERV1 -106 372 1 566 218 231 46 chr20 34884721 34885024 -37268858 + MLT1H1 LTR MaLR 186 544 -11 361 206 113 0 chr20 34885085 34885182 -37268700 - MIR SINE MIR -93 169 62 274 248 88 58 chr20 34885274 34885411 -37268471 + MIR3 SINE MIR 6 146 -62 827 229 29 45 chr20 34885411 34885656 -37268226 - MER102b DNA MER1_type -2 339 99 380 262 8 66 chr20 34886514 34886636 -37267246 - L2 LINE L2 0 3313 3199 936 142 7 0 chr20 34886692 34886833 -37267049 - FRAM SINE Alu -2 174 33 1041 271 68 18 chr20 34887219 34887602 -37266280 + LTR16C LTR ERVL 90 491 0 2364 91 10 0 chr20 34887615 34887913 -37265969 - AluSq SINE Alu -12 301 1 924 230 50 74 chr20 34888160 34888564 -37265318 + MLT1K LTR MaLR 195 588 0 225 0 0 0 chr20 34888762 34888787 -37265095 + (CA)n Simple_repeat Simple_repeat 2 26 0 404 262 65 70 chr20 34889481 34889710 -37264172 + MLT1H LTR MaLR 80 307 -242 1662 199 98 7 chr20 34890131 34890538 -37263344 + LTR40c LTR ERVL 17 460 -5 2292 218 46 0 chr20 34891033 34891488 -37262394 - MLT1G LTR MaLR 0 590 115 207 0 0 0 chr20 34891491 34891514 -37262368 + (TTG)n Simple_repeat Simple_repeat 2 24 0 710 251 39 29 chr20 34891523 34891730 -37262152 - MIR SINE MIR -10 252 44 456 240 60 0 chr20 34891735 34891835 -37262047 - MLT1G LTR MaLR -460 130 25 1197 85 146 0 chr20 34891900 34892065 -37261817 - AluSx SINE Alu -123 189 1 723 240 60 10 chr20 34892328 34892528 -37261354 - L1MC5 LINE L1 -34 7927 7718 1616 169 135 22 chr20 34892627 34892983 -37260899 + MSTD LTR MaLR 1 396 0 1678 186 3 10 chr20 34893016 34893322 -37260560 - AluJo SINE Alu -8 304 1 61 73 0 0 chr20 34893406 34893530 -37260352 + AT_rich Low_complexity Low_complexity 1 124 0 247 299 38 83 chr20 34894056 34894451 -37259431 + L1M4 LINE L1 4167 4543 -1603 34 24 0 0 chr20 34894451 34894492 -37259390 + AT_rich Low_complexity Low_complexity 1 41 0 372 241 26 26 chr20 34894511 34894668 -37259214 - L1MC4 LINE L1 -1339 6983 1995 5193 113 17 66 chr20 34894672 34894938 -37258944 - Tigger3b DNA MER2_type -1798 1230 953 2090 100 4 0 chr20 34894938 34895219 -37258663 + AluSx SINE Alu 1 282 -30 5193 113 17 66 chr20 34895219 34895891 -37257991 - Tigger3b DNA MER2_type -2075 953 338 679 172 25 8 chr20 34895909 34896031 -37257851 + FLAM_C SINE Alu 2 125 -18 2464 68 3 0 chr20 34896043 34896353 -37257529 + AluSp SINE Alu 1 311 -2 424 345 49 20 chr20 34896378 34896624 -37257258 + L1M4 LINE L1 4695 4947 -1199 501 243 9 9 chr20 34896733 34896840 -37257042 - FLAM_A SINE Alu -28 114 8 2319 83 0 0 chr20 34896899 34897200 -37256682 + AluSx SINE Alu 1 301 -11 857 291 68 20 chr20 34897298 34897787 -37256095 + L1MDa LINE L1 3 6253 -1949 841 193 0 12 chr20 34897772 34897933 -37255949 + L1M4 LINE L1 3684 3842 -2304 * 2046 142 0 0 chr20 34897940 34898250 -37255632 - AluSx SINE Alu -2 310 1 959 162 17 12 chr20 34898250 34898423 -37255459 - MER3 DNA MER1_type -82 127 1 1184 197 22 4 chr20 34898496 34898724 -37255158 + MIR SINE MIR 31 262 0 618 266 13 16 chr20 34898719 34898902 -37254980 - MIR SINE MIR -63 145 18 * 2172 117 0 3 chr20 34899488 34899796 -37254086 - AluSp SINE Alu -6 307 1 469 265 72 72 chr20 34899890 34900343 -37253539 + MLT1L LTR MaLR 2 543 -72 700 248 97 13 chr20 34900672 34900898 -37252984 + Charlie8 DNA MER1_type 17 261 -2156 666 302 73 4 chr20 34901069 34901314 -37252568 - MIR SINE MIR 0 262 1 204 111 0 0 chr20 34901370 34901406 -37252476 + (GA)n Simple_repeat Simple_repeat 1 36 0 472 295 115 10 chr20 34901515 34901715 -37252167 - LTR67 LTR ERVL -6 551 331 180 0 0 0 chr20 34901917 34901937 -37251945 + (TTG)n Simple_repeat Simple_repeat 3 22 0 2120 110 0 16 chr20 34901975 34902307 -37251575 + AluSx SINE Alu 1 312 0 1901 133 0 11 chr20 34902309 34902587 -37251295 - AluSx SINE Alu -36 276 2 563 262 33 111 chr20 34902590 34902834 -37251048 - LTR67 LTR ERVL -332 225 1 938 174 0 0 chr20 34902937 34903098 -37250784 - AluJb SINE Alu -15 297 137 362 279 19 39 chr20 34903106 34903260 -37250622 - LTR33 LTR ERVL -76 445 295 849 280 10 10 chr20 34903296 34903503 -37250379 - LTR33 LTR ERVL -301 220 14 2138 113 6 6 chr20 34903896 34904207 -37249675 - AluSq SINE Alu -2 311 1 2306 114 0 0 chr20 34904643 34904960 -37248922 - LTR12 LTR ERV1 0 714 398 421 35 18 0 chr20 34904960 34905017 -37248865 - LTR12 LTR ERV1 -656 58 1 1438 249 43 12 chr20 34905921 34906288 -37247594 + LTR16A LTR ERVL 53 447 -3 * 2135 213 75 14 chr20 34906288 34906777 -37247105 + MLT1H LTR MaLR 31 549 0 1354 118 0 5 chr20 34907137 34907332 -37246550 + AluSx SINE Alu 1 194 -118 402 291 0 67 chr20 34908390 34908424 -37245458 + MIR SINE MIR 48 83 -179 1886 117 0 37 chr20 34908424 34908724 -37245158 - AluSx SINE Alu -23 289 1 402 291 0 67 chr20 34908724 34908854 -37245028 + MIR SINE MIR 83 201 -61 1870 133 0 7 chr20 34908939 34909252 -37244630 - AluSx SINE Alu 0 312 2 1779 139 0 20 chr20 34909256 34909604 -37244278 - AluSx SINE Alu 0 312 1 973 217 127 28 chr20 34910232 34910666 -37243216 - HAL1b LINE L1 -118 1230 754 455 172 32 0 chr20 34910699 34910792 -37243090 - L1MB7 LINE L1 -16 6168 6073 1953 120 20 3 chr20 34910792 34911091 -37242791 - AluSx SINE Alu -8 304 1 2514 46 0 3 chr20 34911102 34911406 -37242476 - AluY SINE Alu -7 304 2 1635 161 0 43 chr20 34911413 34911717 -37242165 - AluJb SINE Alu -20 292 2 2005 159 113 61 chr20 34911717 34912042 -37241840 - L1MB7 LINE L1 -395 5785 5478 2052 125 3 6 chr20 34912042 34912354 -37241528 - AluSx SINE Alu -1 311 1 2005 159 113 61 chr20 34912354 34912504 -37241378 - L1MB7 LINE L1 -702 5478 5337 1796 131 0 53 chr20 34912504 34912824 -37241058 + AluJo SINE Alu 1 303 -9 2005 159 113 61 chr20 34912824 34913003 -37240879 - L1MB7 LINE L1 -843 5337 5169 2329 93 0 0 chr20 34913003 34913313 -37240569 - AluSg SINE Alu 0 310 1 2005 159 113 61 chr20 34913313 34913500 -37240382 - L1MB7 LINE L1 -1011 5169 4868 2056 103 4 0 chr20 34913519 34913800 -37240082 - AluSx SINE Alu -22 290 9 586 148 30 0 chr20 34913917 34914018 -37239864 + MER33 DNA MER1_type 1 104 -220 804 138 0 16 chr20 34914018 34914141 -37239741 + FRAM SINE Alu 33 153 -23 238 122 49 0 chr20 34914141 34914182 -37239700 + MER33 DNA MER1_type 95 137 -187 674 104 74 74 chr20 34914335 34914415 -37239467 + MER33 DNA MER1_type 140 219 -2366 1586 171 38 0 chr20 34914415 34914581 -37239301 - AluJb SINE Alu -14 298 115 423 0 0 0 chr20 34914581 34914628 -37239254 + (TG)n Simple_repeat Simple_repeat 2 48 0 1586 171 38 0 chr20 34914628 34914748 -37239134 - AluJb SINE Alu -197 115 1 674 104 74 74 chr20 34914748 34914830 -37239052 + MER33 DNA MER1_type 218 302 -22 225 65 0 0 chr20 34916049 34916080 -37237802 + (TTTTA)n Simple_repeat Simple_repeat 3 33 0 2295 106 0 3 chr20 34916164 34916475 -37237407 + AluSx SINE Alu 1 310 -2 432 303 64 25 chr20 34917000 34917281 -37236601 - L1MEd LINE L1 -5738 381 90 1761 140 0 11 chr20 34917283 34917562 -37236320 + AluJo SINE Alu 1 276 -36 1787 154 11 0 chr20 34918111 34918396 -37235486 - AluJo SINE Alu -24 288 1 1994 103 146 70 chr20 34918465 34918694 -37235188 - MSTA LTR MaLR 0 428 218 2359 91 0 0 chr20 34918694 34919001 -37234881 - AluSc SINE Alu -1 308 2 1994 103 146 70 chr20 34919001 34919169 -37234713 - MSTA LTR MaLR -210 218 1 874 248 64 60 chr20 34919635 34919737 -37234145 - MIR SINE MIR 0 262 162 1443 170 0 93 chr20 34919737 34920061 -37233821 + AluJo SINE Alu 3 296 -16 874 248 64 60 chr20 34920061 34920208 -37233674 - MIR SINE MIR -100 162 12 897 147 0 0 chr20 34920238 34920367 -37233515 + FLAM_C SINE Alu 1 129 -4 1065 161 0 0 chr20 34920508 34920682 -37233200 - FRAM SINE Alu -3 173 1 255 341 40 52 chr20 34920825 34920998 -37232884 - MIR SINE MIR -70 192 22 883 244 122 36 chr20 34921659 34922144 -37231738 - MLT1G1 LTR MaLR 0 555 1 460 265 53 0 chr20 34922220 34922352 -37231530 + MER117 DNA MER1_type 57 195 -2 336 258 174 36 chr20 34922471 34922638 -37231244 - L2 LINE L2 0 3313 3124 1828 135 40 17 chr20 34923264 34923561 -37230321 + AluSx SINE Alu 1 304 -8 846 314 70 32 chr20 34923736 34924262 -37229620 - MLT1K LTR MaLR -18 570 25 2319 163 41 5 chr20 34924897 34925308 -37228574 + MSTB LTR MaLR 1 426 0 244 39 0 115 chr20 34925955 34926007 -37227875 + Alu SINE Alu 256 301 0 2063 136 3 0 chr20 34926059 34926367 -37227515 - AluSx SINE Alu -3 309 1 311 110 0 137 chr20 34926604 34926677 -37227205 - Zaphod DNA AcHobo -3968 63 1 232 170 0 64 chr20 34926703 34926750 -37227132 - L2 LINE L2 -8 3264 3221 1590 195 13 0 chr20 34927133 34927440 -37226442 + AluJo SINE Alu 1 311 -1 2227 113 0 0 chr20 34927542 34927852 -37226030 + AluSx SINE Alu 1 310 -2 813 112 0 0 chr20 34927852 34927968 -37225914 - AluJb SINE Alu -196 116 1 679 203 39 44 chr20 34927978 34928160 -37225722 - MLT1D LTR MaLR -323 182 2 1834 150 7 0 chr20 34928642 34928935 -37224947 + AluJb SINE Alu 1 295 -17 2015 110 4 0 chr20 34928941 34929245 -37224637 + AluSx SINE Alu 1 305 0 1121 121 5 45 chr20 34929249 34929448 -37224434 + AluSg/x SINE Alu 120 310 0 534 268 123 77 chr20 34929904 34930116 -37223766 - L2 LINE L2 -8 3305 3071 1502 171 31 11 chr20 34930116 34930403 -37223479 + AluJo SINE Alu 1 293 -19 534 268 123 77 chr20 34930403 34930515 -37223367 - L2 LINE L2 -242 3071 2966 1434 133 157 126 chr20 34930771 34931185 -37222697 - MSTA LTR MaLR -1 427 1 2259 104 0 0 chr20 34931439 34931747 -37222135 + AluSx SINE Alu 1 308 -4 490 226 44 0 chr20 34931796 34931931 -37221951 - L2 LINE L2 -345 2968 2828 383 167 271 10 chr20 34931931 34932027 -37221855 - MER5A DNA MER1_type -2 187 67 1018 130 49 0 chr20 34932027 34932189 -37221693 - FRAM SINE Alu -5 171 2 348 200 0 0 chr20 34932192 34932252 -37221630 - MER5A DNA MER1_type -119 70 11 568 262 9 61 chr20 34932263 34932371 -37221511 - L2 LINE L2 -515 2799 2706 2086 114 3 10 chr20 34932371 34932678 -37221204 + AluSq SINE Alu 1 305 -8 568 262 9 61 chr20 34932678 34932783 -37221099 - L2 LINE L2 -608 2706 2597 277 246 0 62 chr20 34932844 34932909 -37220973 - MER113 DNA MER1_type? -3 518 458 598 224 58 19 chr20 34932923 34933128 -37220754 - MER113 DNA MER1_type? -308 213 1 1940 117 3 55 chr20 34933149 34933474 -37220408 + AluSx SINE Alu 1 308 -4 21 36 0 0 chr20 34933493 34933521 -37220361 + AT_rich Low_complexity Low_complexity 1 28 0 459 219 75 41 chr20 34933799 34933945 -37219937 + MER5B DNA MER1_type 1 151 -27 351 246 55 120 chr20 34933984 34934167 -37219715 + MIR SINE MIR 21 191 -71 24 0 0 0 chr20 34934395 34934419 -37219463 + AT_rich Low_complexity Low_complexity 1 24 0 23 33 0 0 chr20 34934586 34934616 -37219266 + AT_rich Low_complexity Low_complexity 1 30 0 417 345 39 4 chr20 34934620 34934849 -37219033 - L1ME3 LINE L1 -238 5924 5688 319 290 116 19 chr20 34935393 34935548 -37218334 + L2 LINE L2 3100 3269 -3 237 183 0 83 chr20 34935712 34935772 -37218110 - MLT1H LTR MaLR -1 548 494 3178 68 52 5 chr20 34935785 34935825 -37218057 - MLT2A1 LTR ERVL 0 444 407 240 35 0 0 chr20 34935825 34935854 -37218028 + (TA)n Simple_repeat Simple_repeat 2 30 0 3178 68 52 5 chr20 34935854 34936237 -37217645 - MLT2A1 LTR ERVL -37 407 1 207 100 0 0 chr20 34936243 34936273 -37217609 + (TTCC)n Simple_repeat Simple_repeat 1 30 0 1874 110 35 0 chr20 34936273 34936555 -37217327 - AluSp SINE Alu -21 292 1 529 199 230 21 chr20 34936812 34937055 -37216827 - MLT1H LTR MaLR -228 321 18 1744 100 6 118 chr20 34937235 34937574 -37216308 + AluSx SINE Alu 1 301 -11 2172 103 3 3 chr20 34937928 34938228 -37215654 - AluSp SINE Alu -13 300 1 213 231 67 0 chr20 34938640 34938744 -37215138 + (CCCCAG)n Simple_repeat Simple_repeat 3 113 0 2197 101 7 0 chr20 34939134 34939442 -37214440 - AluSx SINE Alu 0 312 3 983 145 155 5 chr20 34939548 34939748 -37214134 + MER30 DNA MER1_type 1 230 0 1524 195 100 26 chr20 34940460 34940839 -37213043 - LTR16C LTR ERVL -7 484 78 486 133 8 172 chr20 34940949 34941077 -37212805 + MLT1C LTR MaLR 1 107 -283 1161 77 0 41 chr20 34941079 34941249 -37212633 + AluSq SINE Alu 133 295 -18 593 203 21 94 chr20 34941258 34941450 -37212432 + MLT1C LTR MaLR 96 273 -117 1164 156 145 50 chr20 34941450 34941590 -37212292 + AluJb SINE Alu 3 128 -184 2047 104 0 58 chr20 34941590 34941918 -37211964 + AluSx SINE Alu 2 310 -2 1164 156 145 50 chr20 34941918 34942059 -37211823 + AluJb SINE Alu 128 311 -1 699 205 8 0 chr20 34942066 34942193 -37211689 + MLT1C LTR MaLR 340 467 0 282 264 150 14 chr20 34942889 34943029 -37210853 + MIR3 SINE MIR 18 176 -32 2593 80 0 0 chr20 34943231 34943547 -37210335 - AluSx SINE Alu 0 316 1 1981 142 17 0 chr20 34943547 34943843 -37210039 - AluJo SINE Alu -11 301 1 733 299 140 35 chr20 34943843 34944328 -37209554 + MLT1K LTR MaLR 38 573 -15 227 268 0 0 chr20 34944363 34944419 -37209463 + GA-rich Low_complexity Low_complexity 3 58 0 260 218 0 26 chr20 34944909 34944987 -37208895 + CT-rich Low_complexity Low_complexity 4 79 0 1938 168 3 13 chr20 34944996 34945305 -37208577 - AluJo SINE Alu -6 306 1 578 258 137 63 chr20 34945395 34945822 -37208060 + MLT1J LTR MaLR 31 450 0 402 240 50 0 chr20 34946201 34946301 -37207581 - MER91C DNA MER1_type 0 140 36 1294 189 8 44 chr20 34946559 34946807 -37207075 + MER8 DNA MER2_type 1 239 0 3601 232 61 16 chr20 34946968 34947614 -37206268 + L2 LINE L2 1877 2579 -735 1081 154 0 18 chr20 34947614 34947783 -37206099 + FRAM SINE Alu 1 166 0 3601 232 61 16 chr20 34947783 34948067 -37205815 + L2 LINE L2 2579 2849 -465 270 136 0 0 chr20 34948151 34948195 -37205687 + (GGGGA)n Simple_repeat Simple_repeat 5 48 0 203 342 79 46 chr20 34948762 34948914 -37204968 - L2 LINE L2 -25 3247 3091 563 327 101 14 chr20 34948929 34949137 -37204745 + MIR SINE MIR 31 256 -6 195 42 0 0 chr20 34949143 34949167 -37204715 + (TGG)n Simple_repeat Simple_repeat 3 26 0 2231 97 7 0 chr20 34949181 34949470 -37204412 + AluSc SINE Alu 1 291 -18 1910 163 0 10 chr20 34949479 34949779 -37204103 + AluJb SINE Alu 1 297 -15 279 319 42 50 chr20 34949796 34950034 -37203848 - L2 LINE L2 -195 3077 2842 2195 104 0 43 chr20 34950154 34950480 -37203402 + AluSx SINE Alu 1 312 0 945 136 8 0 chr20 34950483 34950615 -37203267 + AluSq/x SINE Alu 1 133 -180 1579 141 119 69 chr20 34950634 34950955 -37202927 - L1MB2 LINE L1 -17 6154 5851 1825 161 3 7 chr20 34950955 34951241 -37202641 + AluJo SINE Alu 15 299 -13 1722 153 47 22 chr20 34951244 34951562 -37202320 + AluJb SINE Alu 1 325 0 1579 141 119 69 chr20 34951562 34951612 -37202270 - L1MB2 LINE L1 -321 5850 5759 239 316 119 12 chr20 34951664 34951832 -37202050 - L2 LINE L2 -627 2687 2502 568 70 0 70 chr20 34952003 34952089 -37201793 - MADE1 DNA Mariner 0 80 1 348 306 22 22 chr20 34952192 34952326 -37201556 + MIR SINE MIR 20 153 -55 195 129 0 0 chr20 34952347 34952378 -37201504 + (ATGGTG)n Simple_repeat Simple_repeat 1 31 0 853 200 100 38 chr20 34952379 34952589 -37201293 - MIR SINE MIR -8 254 32 307 239 28 0 chr20 34952597 34952668 -37201214 + MER5B DNA MER1_type 28 100 -78 1231 196 0 9 chr20 34953008 34953237 -37200645 - MSTC LTR MaLR 0 428 202 848 150 0 50 chr20 34953237 34953377 -37200505 - FLAM_C SINE Alu -6 137 5 1561 85 0 0 chr20 34953381 34953593 -37200289 - MSTC LTR MaLR -216 212 1 1233 229 61 13 chr20 34953874 34954210 -37199672 + L1ME3 LINE L1 5805 6154 -8 196 284 12 12 chr20 34954797 34954878 -37199004 - MIR SINE MIR -91 117 37 724 238 19 6 chr20 34955680 34955840 -37198042 - L2 LINE L2 -1 3312 3151 1549 205 46 116 chr20 34955844 34956379 -37197503 + L1ME3 LINE L1 5600 6096 -66 2042 135 7 10 chr20 34956379 34956675 -37197207 + AluSx SINE Alu 1 295 -17 1549 205 46 116 chr20 34956675 34956699 -37197183 + L1ME3 LINE L1 6096 6120 -42 533 301 158 30 chr20 34956703 34957197 -37196685 - L2 LINE L2 -101 3212 2635 2244 105 34 0 chr20 34957568 34957864 -37196018 + AluSx SINE Alu 1 306 -6 2482 78 0 13 chr20 34958956 34959263 -37194619 + AluSx SINE Alu 1 303 -9 2211 133 0 16 chr20 34959865 34960180 -37193702 + AluSx SINE Alu 1 310 -2 1149 252 43 0 chr20 34960239 34960564 -37193318 + L1ME1 LINE L1 5480 5818 -348 525 262 135 42 chr20 34960679 34961057 -37192825 - MER65A LTR ERV1 -32 413 1 1015 223 90 7 chr20 34961070 34961348 -37192534 + L1ME1 LINE L1 5829 6129 -37 1605 150 66 22 chr20 34961364 34961638 -37192244 + AluJo SINE Alu 12 297 -15 30 27 0 0 chr20 34961663 34961700 -37192182 + AT_rich Low_complexity Low_complexity 1 37 0 747 268 66 7 chr20 34961888 34962160 -37191722 - LTR16A1 LTR ERVL -17 440 153 2282 129 0 0 chr20 34963219 34963530 -37190352 + AluSx SINE Alu 1 311 -1 2032 160 0 25 chr20 34963836 34964154 -37189728 - AluJo SINE Alu 0 312 3 2266 114 3 0 chr20 34964355 34964661 -37189221 + AluSx SINE Alu 1 307 -5 518 264 57 7 chr20 34964840 34964980 -37188902 + MIR SINE MIR 37 183 -79 234 346 37 9 chr20 34965022 34965129 -37188753 + L3 LINE CR1 1067 1176 -401 713 268 101 66 chr20 34965176 34965319 -37188563 + L1ME4a LINE L1 4957 5094 -1027 1974 159 3 7 chr20 34965319 34965628 -37188254 + AluJb SINE Alu 1 308 -4 713 268 101 66 chr20 34965628 34965879 -37188003 + L1ME4a LINE L1 5094 5335 -786 2883 10 0 0 chr20 34965879 34966186 -37187696 - AluYb8 SINE Alu -11 307 1 713 268 101 66 chr20 34966186 34966338 -37187544 + L1ME4a LINE L1 5335 5524 -597 2441 86 0 3 chr20 34966338 34966639 -37187243 - AluY SINE Alu -11 300 1 713 268 101 66 chr20 34966639 34966673 -37187209 + L1ME4a LINE L1 5524 5555 -566 1379 204 91 4 chr20 34966690 34966955 -37186927 + AluJb SINE Alu 1 288 -24 41 21 0 0 chr20 34966955 34967003 -37186879 + AT_rich Low_complexity Low_complexity 1 48 0 573 294 42 42 chr20 34967311 34967641 -37186241 + L1ME4a LINE L1 5596 5925 -196 434 211 65 8 chr20 34967667 34967790 -37186092 + L1ME4a LINE L1 5992 6121 0 2312 120 7 0 chr20 34967839 34968147 -37185735 + AluSx SINE Alu 1 310 -2 201 74 0 0 chr20 34968155 34968182 -37185700 + (GGAA)n Simple_repeat Simple_repeat 2 28 0 381 350 31 23 chr20 34968243 34968503 -37185379 + L3 LINE CR1 1273 1534 -43 2400 106 0 0 chr20 34968635 34968938 -37184944 + AluSg SINE Alu 1 303 -7 1610 165 73 0 chr20 34968950 34969222 -37184660 + AluJb SINE Alu 1 292 -20 3314 198 66 25 chr20 34969245 34970013 -37183869 - MER21B LTR ERV1 -15 848 49 284 208 10 129 chr20 34970114 34970195 -37183687 - MER21B LTR ERV1 -774 89 21 1860 116 0 8 chr20 34970195 34970446 -37183436 - AluJb SINE Alu -46 266 18 284 208 10 129 chr20 34970446 34970465 -37183417 - MER21B LTR ERV1 -842 21 1 180 0 0 0 chr20 34970527 34970547 -37183335 + (TTTG)n Simple_repeat Simple_repeat 3 22 0 2222 104 0 0 chr20 34970551 34970838 -37183044 - AluSx SINE Alu -25 287 1 269 215 195 14 chr20 34971029 34971174 -37182708 - MIR SINE MIR -48 214 35 1546 180 58 0 chr20 34971381 34971659 -37182223 + AluJo SINE Alu 1 294 -18 2405 87 3 0 chr20 34971659 34971957 -37181925 + AluSc SINE Alu 1 299 -10 311 173 53 27 chr20 34971961 34972036 -37181846 - MIR SINE MIR -93 169 93 756 209 17 6 chr20 34972170 34972347 -37181535 - MER104 DNA MER2_type 0 180 2 2311 110 0 7 chr20 34972347 34972655 -37181227 + AluSx SINE Alu 1 306 -6 405 346 23 0 chr20 34972671 34972801 -37181081 - MIR SINE MIR -114 148 16 297 240 0 13 chr20 34972838 34972913 -37180969 - MER91B DNA MER1_type -115 75 2 2158 103 0 40 chr20 34973125 34973427 -37180455 + AluSc SINE Alu 3 292 -17 1551 258 20 18 chr20 34973509 34973913 -37179969 - LTR16A LTR ERVL 0 450 43 1572 189 13 91 chr20 34973913 34974309 -37179573 - MLT1A1 LTR MaLR 0 365 1 1551 258 20 18 chr20 34974309 34974353 -37179529 - LTR16A LTR ERVL -407 43 1 401 329 7 28 chr20 34974371 34974514 -37179368 + MIR SINE MIR 14 153 -109 422 289 47 20 chr20 34974738 34974887 -37178995 - L2 LINE L2 -517 2797 2645 2218 87 0 4 chr20 34974887 34975164 -37178718 + AluSc SINE Alu 31 306 -3 384 291 154 4 chr20 34975536 34975763 -37178119 - MLT1L LTR MaLR -8 607 347 348 304 36 14 chr20 34975831 34975969 -37177913 - MLT1L LTR MaLR -355 260 120 331 274 97 0 chr20 34976108 34976221 -37177661 + LTR16A LTR ERVL 327 450 0 559 201 123 0 chr20 34976226 34976380 -37177502 - MER117 DNA MER1_type -9 188 16 535 275 109 0 chr20 34976986 34977124 -37176758 - MLT1G LTR MaLR -322 268 116 371 204 32 11 chr20 34977153 34977246 -37176636 + L1MCc LINE L1 7 101 -6322 1818 150 3 27 chr20 34977258 34977577 -37176305 - AluJb SINE Alu 0 312 1 1183 203 122 3 chr20 34977578 34977898 -37175984 - L1MCc LINE L1 -5029 1394 1037 667 183 0 0 chr20 34977938 34978042 -37175840 - FLAM_A SINE Alu -38 104 1 508 202 22 137 chr20 34978043 34978226 -37175656 - L1MCc LINE L1 -5427 996 835 555 325 21 4 chr20 34978331 34978565 -37175317 - L1MCc LINE L1 -5917 506 269 519 238 16 0 chr20 34978594 34978893 -37174989 + AluSp/q SINE Alu 188 313 0 589 134 18 9 chr20 34978893 34979005 -37174877 + GA-rich Low_complexity Low_complexity 1 113 0 892 227 0 12 chr20 34979005 34979247 -37174635 + L1MCc LINE L1 1370 1608 -5333 1373 190 40 25 chr20 34979281 34979555 -37174327 + AluJo SINE Alu 19 296 -16 2787 264 25 35 chr20 34979558 34979891 -37173991 + L1MCc LINE L1 1798 2133 -4989 195 42 0 0 chr20 34979891 34979915 -37173967 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 2787 264 25 35 chr20 34979915 34980594 -37173288 + L1MCc LINE L1 2133 2800 -4322 218 250 208 83 chr20 34980605 34980725 -37173157 - L2 LINE L2 -2 3270 3136 1284 221 49 49 chr20 34982058 34982448 -37171434 + MLT1C LTR MaLR 59 448 -19 995 217 90 37 chr20 34982547 34982791 -37171091 - MIR SINE MIR 0 262 6 1933 112 0 4 chr20 34982855 34983113 -37170769 + AluSx SINE Alu 35 291 -21 486 33 0 0 chr20 34983157 34983217 -37170665 + (TA)n Simple_repeat Simple_repeat 1 60 0 387 0 0 0 chr20 34983216 34983259 -37170623 + (GA)n Simple_repeat Simple_repeat 2 44 0 * 605 227 8 0 chr20 34983259 34983378 -37170504 - AluJb SINE Alu -34 278 159 189 192 77 19 chr20 34983381 34983433 -37170449 + MIR SINE MIR 117 171 -91 522 197 110 8 chr20 34983921 34984048 -37169834 - L2 LINE L2 -2 3311 3172 1683 144 51 81 chr20 34984093 34984142 -37169740 - MLT1B LTR MaLR -6 384 335 3546 120 15 28 chr20 34984142 34984346 -37169536 - MER1A DNA MER1_type -2173 527 322 2417 87 0 0 chr20 34984346 34984644 -37169238 - AluSg SINE Alu -12 298 1 3546 120 15 28 chr20 34984644 34984973 -37168909 - MER1A DNA MER1_type -2378 322 1 1683 144 51 81 chr20 34984973 34985152 -37168730 - MLT1B LTR MaLR -55 335 167 2239 96 0 20 chr20 34985152 34985478 -37168404 + AluSg SINE Alu 1 320 0 1683 144 51 81 chr20 34985478 34985640 -37168242 - MLT1B LTR MaLR -223 167 2 677 135 63 0 chr20 34985659 34985770 -37168112 - FLAM_C SINE Alu -10 133 16 652 220 165 6 chr20 34985776 34986027 -37167855 - L2 LINE L2 -243 3070 2770 202 308 26 26 chr20 34986302 34986380 -37167502 - L2 LINE L2 -287 2985 2908 349 282 39 53 chr20 34986474 34986680 -37167202 + L1MC4a LINE L1 5806 6008 -1800 2019 138 20 3 chr20 34986758 34987054 -37166828 - AluSx SINE Alu -5 307 7 2161 168 128 2 chr20 34987174 34987597 -37166285 + LTR69 LTR ERVL 3 478 -110 680 191 9 0 chr20 34987598 34987713 -37166169 + FLAM_C SINE Alu 2 117 -26 681 154 77 0 chr20 34987728 34987845 -37166037 + LTR69 LTR ERVL 463 588 0 211 274 59 0 chr20 34988537 34988588 -37165294 + MIR SINE MIR 93 146 -62 1878 159 3 37 chr20 34988765 34988903 -37164979 + AluJo SINE Alu 1 142 -170 2336 95 10 0 chr20 34988903 34989197 -37164685 + AluSp SINE Alu 3 299 -14 1878 159 3 37 chr20 34989197 34989379 -37164503 + AluJo SINE Alu 142 310 -2 312 346 91 34 chr20 34989538 34989746 -37164136 + L1MEd LINE L1 243 462 -5657 1410 199 35 49 chr20 34989821 34990167 -37163715 - MLT1B LTR MaLR -2 388 48 412 262 77 73 chr20 34990191 34990379 -37163503 + L1MEd LINE L1 1032 1218 -1272 1716 109 80 4 chr20 34990379 34990658 -37163224 + AluSx SINE Alu 30 326 0 412 262 77 73 chr20 34990658 34990738 -37163144 + L1MEd LINE L1 1218 1296 -1194 1989 174 0 0 chr20 34990738 34991042 -37162840 + AluJo SINE Alu 1 304 -8 412 262 77 73 chr20 34991042 34991300 -37162582 + L1MEd LINE L1 1296 1552 -938 1961 138 57 0 chr20 34991300 34991582 -37162300 + AluSx SINE Alu 1 298 -14 180 0 0 0 chr20 34991582 34991602 -37162280 + (TA)n Simple_repeat Simple_repeat 2 21 0 412 262 77 73 chr20 34991602 34991668 -37162214 + L1MEd LINE L1 1551 1693 -797 293 312 40 40 chr20 34991669 34991868 -37162014 + MLT1K LTR MaLR 389 587 -1 228 35 0 0 chr20 34992132 34992161 -37161721 + (CCA)n Simple_repeat Simple_repeat 1 29 0 369 0 0 0 chr20 34992162 34992203 -37161679 + (CA)n Simple_repeat Simple_repeat 1 41 0 1945 159 0 25 chr20 34992612 34992926 -37160956 - AluJb SINE Alu -6 306 1 926 162 7 19 chr20 34992945 34993099 -37160783 + FRAM SINE Alu 1 146 -30 2397 68 3 3 chr20 34993101 34993396 -37160486 - AluY SINE Alu -16 295 1 2304 67 0 42 chr20 34994080 34994393 -37159489 + AluY SINE Alu 1 300 -11 1834 161 52 25 chr20 34994548 34994914 -37158968 - MLT2C1 LTR ERVL 0 397 22 1814 155 7 24 chr20 34995415 34995592 -37158290 - AluJo SINE Alu -20 292 120 2076 145 0 7 chr20 34995592 34995895 -37157987 + AluJb SINE Alu 1 301 -11 1814 155 7 24 chr20 34995895 34996013 -37157869 - AluJo SINE Alu -192 120 2 312 173 202 39 chr20 34996116 34996220 -37157662 - MIR3 SINE MIR -51 157 37 188 230 0 6 chr20 34996971 34997039 -37156843 + MIR SINE MIR 29 143 -119 520 279 55 12 chr20 34997119 34997284 -37156598 + MIR SINE MIR 20 191 -71 2534 65 3 0 chr20 34997628 34997937 -37155945 - AluY SINE Alu -1 310 1 30 0 0 0 chr20 34997985 34998015 -37155867 + AT_rich Low_complexity Low_complexity 1 30 0 346 309 154 46 chr20 34998701 34998960 -37154922 - L2 LINE L2 -60 3212 2926 379 227 57 0 chr20 34999333 34999421 -37154461 - L2 LINE L2 -13 3300 3208 2316 109 0 0 chr20 34999739 35000041 -37153841 - AluSx SINE Alu -10 302 1 2066 113 19 45 chr20 35000561 35000872 -37153010 + AluSx SINE Alu 1 303 -9 267 319 32 0 chr20 35000962 35001056 -37152826 + L1ME LINE L1 5684 5780 -341 420 327 0 0 chr20 35001056 35001157 -37152725 + L2 LINE L2 3167 3267 -5 265 293 132 0 chr20 35001864 35001970 -37151912 - MIR SINE MIR -11 251 132 267 255 117 48 chr20 35001982 35002170 -37151712 - L2 LINE L2 -255 3017 2817 205 328 130 34 chr20 35002147 35002470 -37151412 - L2 LINE L2 -645 2669 2316 * 652 281 130 23 chr20 35002638 35003029 -37150853 + Charlie8 DNA MER1_type 39 471 -1946 202 268 0 0 chr20 35003311 35003352 -37150530 + (CACG)n Simple_repeat Simple_repeat 3 43 0 861 213 104 32 chr20 35004091 35004497 -37149385 + MLT1D LTR MaLR 22 467 0 206 214 14 43 chr20 35005020 35005090 -37148792 - MIR SINE MIR -172 90 23 620 241 29 17 chr20 35005262 35005436 -37148446 + MIR SINE MIR 80 255 -7 234 260 153 77 chr20 35006095 35006434 -37147448 - L2 LINE L2 -372 2942 2578 1050 182 11 0 chr20 35006435 35006611 -37147271 + MER45A DNA AcHobo 1 178 0 441 202 36 0 chr20 35006776 35006860 -37147022 - MER63 DNA MER1_type -306 756 44 2493 41 0 44 chr20 35008034 35008354 -37145528 + AluY SINE Alu 1 306 -5 336 188 107 40 chr20 35008393 35008542 -37145340 + Charlie7 DNA MER1_type 2425 2583 -29 1594 252 51 46 chr20 35008604 35009149 -37144733 + MLT1G LTR MaLR 3 532 -58 2134 128 0 0 chr20 35009149 35009468 -37144414 + AluSx SINE Alu 2 320 0 1594 252 51 46 chr20 35009468 35009528 -37144354 + MLT1G LTR MaLR 532 590 0 775 169 0 0 chr20 35009691 35009821 -37144061 - AluJb SINE Alu 0 312 183 280 311 22 11 chr20 35010049 35010139 -37143743 + MER5B DNA MER1_type 87 177 -1 234 287 111 19 chr20 35010190 35010298 -37143584 + MIR3 SINE MIR 89 206 -2 226 133 0 167 chr20 35010822 35010882 -37143000 - MIR SINE MIR -78 130 81 319 346 168 13 chr20 35011351 35011649 -37142233 - L2 LINE L2 -6 3266 2923 2201 109 0 13 chr20 35012596 35012898 -37140984 + AluSx SINE Alu 1 298 -14 321 195 49 138 chr20 35013126 35013249 -37140633 - L2 LINE L2 -19 3253 3142 2716 17 0 0 chr20 35013335 35013625 -37140257 + AluYa5 SINE Alu 1 290 -21 844 191 143 5 chr20 35014144 35014333 -37139549 + MER58A DNA MER1_type 6 220 -4 2352 100 0 22 chr20 35014499 35014818 -37139064 - AluSx SINE Alu 0 312 1 2145 171 36 13 chr20 35014828 35015214 -37138668 - MSTD LTR MaLR -1 395 1 273 192 39 0 chr20 35015247 35015299 -37138583 + MIR SINE MIR 55 108 -154 56 55 0 0 chr20 35015390 35015481 -37138401 + AT_rich Low_complexity Low_complexity 1 91 0 841 172 109 142 chr20 35015481 35015784 -37138098 - AluJo SINE Alu -9 293 1 303 352 0 9 chr20 35016236 35016344 -37137538 + MIR3 SINE MIR 15 121 -87 305 244 78 43 chr20 35016696 35016811 -37137071 - MIR SINE MIR -35 227 109 186 286 41 0 chr20 35016929 35016978 -37136904 - MIR SINE MIR -113 95 45 184 274 48 36 chr20 35017279 35017363 -37136519 - MIR3 SINE MIR -114 94 10 836 57 0 28 chr20 35017474 35017580 -37136302 + AluSq/x SINE Alu 1 103 -209 329 252 87 31 chr20 35017581 35017708 -37136174 + MIR3 SINE MIR 10 143 -65 1974 129 17 17 chr20 35018865 35019159 -37134723 - AluSx SINE Alu -18 294 1 25 0 0 0 chr20 35019236 35019261 -37134621 + AT_rich Low_complexity Low_complexity 1 25 0 198 0 0 0 chr20 35019455 35019477 -37134405 + (T)n Simple_repeat Simple_repeat 1 22 0 1976 40 0 32 chr20 35019930 35020223 -37133659 - AluY SINE Alu 0 327 43 202 284 12 25 chr20 35020255 35020336 -37133546 + CT-rich Low_complexity Low_complexity 1 80 0 586 211 110 72 chr20 35020769 35020978 -37132904 + MIR SINE MIR 19 235 -27 219 194 0 0 chr20 35021456 35021492 -37132390 - MIR SINE MIR -115 147 112 2203 122 20 0 chr20 35021565 35021860 -37132022 + AluSx SINE Alu 1 301 -11 2353 47 0 7 chr20 35022015 35022290 -37131592 + AluY SINE Alu 38 310 -1 1757 149 4 4 chr20 35022747 35023015 -37130867 + AluSx SINE Alu 37 304 -8 407 19 0 19 chr20 35023015 35023068 -37130814 + (GGGA)n Simple_repeat Simple_repeat 2 53 0 955 229 70 9 chr20 35023731 35023945 -37129937 + MIR SINE MIR 5 231 -31 209 320 107 16 chr20 35023993 35024115 -37129767 - MIR3 SINE MIR -29 179 47 440 229 41 41 chr20 35024144 35024266 -37129616 + MIR SINE MIR 21 142 -66 708 292 64 15 chr20 35024299 35024566 -37129316 + L2 LINE L2 2846 3125 -188 346 280 77 42 chr20 35024575 35024611 -37129271 + L2 LINE L2 3077 3110 -203 2142 89 3 53 chr20 35024611 35024915 -37128967 - AluSq SINE Alu -23 290 2 346 280 77 42 chr20 35024915 35025021 -37128861 + L2 LINE L2 3110 3224 -89 2372 79 3 3 chr20 35025526 35025818 -37128064 - AluSp SINE Alu -21 292 1 760 143 7 71 chr20 35026074 35026214 -37127668 - FLAM_A SINE Alu 0 133 3 447 286 16 16 chr20 35026222 35026348 -37127534 - MIR SINE MIR -117 145 20 2066 168 62 29 chr20 35026899 35027317 -37126565 - MSTB1 LTR MaLR 0 432 1 2689 58 0 3 chr20 35028426 35028738 -37125144 + AluY SINE Alu 1 311 0 342 316 168 21 chr20 35028882 35029072 -37124810 - MIR SINE MIR -13 249 32 867 214 244 33 chr20 35029220 35029702 -37124180 - L2 LINE L2 0 3313 2695 486 263 0 34 chr20 35029708 35029826 -37124056 - L1M4 LINE L1 -1989 4157 4044 1799 203 135 19 chr20 35029829 35030577 -37123305 - L1M4 LINE L1 -2155 3991 3069 188 269 101 54 chr20 35031143 35031292 -37122590 + MIR SINE MIR 105 260 -2 372 274 154 0 chr20 35032264 35032381 -37121501 + MIR SINE MIR 45 179 -83 243 269 101 81 chr20 35032481 35032630 -37121252 + MIR3 SINE MIR 35 186 -22 336 275 110 71 chr20 35032877 35033059 -37120823 + MIR3 SINE MIR 7 195 -13 2339 86 0 3 chr20 35033386 35033678 -37120204 + AluSc SINE Alu 1 291 -18 241 182 23 0 chr20 35033730 35033774 -37120108 - MIR SINE MIR -77 131 87 557 307 104 0 chr20 35034194 35034396 -37119486 - MIR SINE MIR -6 256 34 254 180 0 66 chr20 35035269 35035330 -37118552 - MIR3 SINE MIR -1 207 151 1979 131 3 47 chr20 35035378 35035699 -37118183 + AluSx SINE Alu 1 307 -5 340 286 24 0 chr20 35035860 35035944 -37117938 - MIR SINE MIR -55 153 68 403 234 156 81 chr20 35036162 35036533 -37117349 - LTR37B LTR ERV1 -69 399 1 400 325 68 34 chr20 35037487 35037794 -37116088 - L2 LINE L2 -192 3080 2769 1919 111 29 62 chr20 35037883 35038190 -37115692 - AluSp SINE Alu -15 298 2 565 271 319 26 chr20 35038374 35038466 -37115416 - L2 LINE L2 -3 3310 3246 1883 145 20 26 chr20 35038466 35038769 -37115113 - AluJo SINE Alu -10 302 2 565 271 319 26 chr20 35038769 35039080 -37114802 - L2 LINE L2 -67 3246 2788 213 292 21 62 chr20 35039090 35039186 -37114696 - MIR SINE MIR -96 112 21 291 336 129 0 chr20 35039317 35039433 -37114449 - MIR3 SINE MIR -14 194 64 439 328 42 21 chr20 35039811 35040003 -37113879 + MIR SINE MIR 8 203 -59 244 193 0 0 chr20 35040167 35040224 -37113658 + L1MD2 LINE L1 6302 6358 -1 322 279 8 47 chr20 35040263 35040369 -37113513 + MIR3 SINE MIR 14 116 -92 2373 102 3 0 chr20 35040369 35040674 -37113208 - AluSp SINE Alu -7 306 1 322 279 8 47 chr20 35040674 35040696 -37113186 + MIR3 SINE MIR 116 137 -71 367 266 81 53 chr20 35041119 35041350 -37112532 + MIR SINE MIR 1 234 -28 418 285 103 56 chr20 35041935 35042130 -37111752 - MIR3 SINE MIR -30 178 17 2592 47 7 0 chr20 35042130 35042427 -37111455 + AluY SINE Alu 1 299 -12 199 247 99 49 chr20 35042468 35042549 -37111333 - L2 LINE L2 0 3313 3229 209 295 42 42 chr20 35042825 35042920 -37110962 + MIR SINE MIR 21 115 -93 * 246 347 99 16 chr20 35042894 35043015 -37110867 - L2 LINE L2 -6 3266 3136 187 231 138 46 chr20 35043073 35043138 -37110744 + MIR SINE MIR 79 149 -113 431 230 172 35 chr20 35043219 35043393 -37110489 - MIR SINE MIR -46 216 19 293 232 219 52 chr20 35043660 35043815 -37110067 - MIR SINE MIR -65 197 17 384 291 24 61 chr20 35044706 35044871 -37109011 - MIR SINE MIR -56 206 48 * 789 242 25 11 chr20 35044845 35045093 -37108789 + MIR SINE MIR 9 255 -7 2105 82 0 33 chr20 35045154 35045460 -37108422 - AluY SINE Alu -15 296 1 223 179 0 0 chr20 35045603 35045642 -37108240 - MIR3 SINE MIR -9 199 161 220 290 200 10 chr20 35045909 35046009 -37107873 - MIR3 SINE MIR -52 156 38 830 84 0 0 chr20 35046608 35046715 -37107167 - AluSq/x SINE Alu -205 107 1 260 315 17 19 chr20 35046774 35046890 -37106992 - MIR SINE MIR -72 136 63 184 243 14 114 chr20 35046893 35046941 -37106941 + L2 LINE L2 3246 3287 -26 1890 174 3 0 chr20 35046941 35047252 -37106630 - AluJo SINE Alu 0 312 1 184 243 14 114 chr20 35047252 35047273 -37106609 + L2 LINE L2 3286 3308 -5 293 330 43 77 chr20 35047804 35048013 -37105869 - L2 LINE L2 -40 3232 3031 1970 133 33 0 chr20 35048099 35048401 -37105481 + AluSx SINE Alu 1 312 0 932 203 11 22 chr20 35048554 35048736 -37105146 - MIR SINE MIR -65 197 18 315 316 39 52 chr20 35049050 35049205 -37104677 - L2 LINE L2 -8 3264 3112 286 324 70 87 chr20 35049666 35050138 -37103744 + L2 LINE L2 2809 3272 0 184 281 30 126 chr20 35050112 35050247 -37103635 + L2 LINE L2 2690 2811 -503 * 730 233 136 80 chr20 35050325 35050851 -37103031 + L1ME4a LINE L1 5481 6038 -83 2529 46 0 0 chr20 35050941 35051244 -37102638 + AluY SINE Alu 1 303 -8 365 250 37 9 chr20 35051427 35051535 -37102347 - MIR SINE MIR -132 130 20 314 218 51 0 chr20 35052228 35052306 -37101576 - MIR SINE MIR -132 130 49 311 300 33 0 chr20 35052384 35052474 -37101408 - L2 LINE L2 -502 2812 2720 528 223 101 7 chr20 35053031 35053179 -37100703 - MIR SINE MIR -60 202 41 1050 134 168 5 chr20 35053811 35054013 -37099869 + MER46A DNA MER2_type 2 236 0 387 237 102 8 chr20 35054023 35054141 -37099741 - MIR SINE MIR -6 256 128 325 130 14 43 chr20 35055052 35055121 -37098761 + MER5C DNA MER1_type 258 324 0 188 268 37 37 chr20 35055173 35055255 -37098627 + MIR SINE MIR 143 224 -38 * 209 275 154 0 chr20 35055219 35055310 -37098572 - MIR SINE MIR -1 261 157 247 261 45 11 chr20 35055477 35055565 -37098317 + MIR SINE MIR 45 135 -73 193 161 179 54 chr20 35055631 35055687 -37098195 + L2 LINE L2 3173 3235 -37 251 225 141 42 chr20 35055696 35055767 -37098115 + L2 LINE L2 3173 3250 -22 186 307 139 30 chr20 35056633 35056734 -37097148 + MIR SINE MIR 58 169 -93 514 296 76 31 chr20 35056911 35057134 -37096748 + MIR SINE MIR 2 234 -28 432 332 75 5 chr20 35058328 35058542 -37095340 - MIR SINE MIR -14 248 20 305 203 27 27 chr20 35058651 35058725 -37095157 + L2 LINE L2 3198 3271 -1 406 325 62 36 chr20 35058798 35058992 -37094890 - MIR SINE MIR -51 211 13 255 221 24 134 chr20 35059636 35059763 -37094119 + MIR SINE MIR 37 149 -59 1765 108 40 0 chr20 35059766 35060017 -37093865 + AluSq SINE Alu 5 265 -48 429 242 11 11 chr20 35060019 35060114 -37093768 - MLT1A1 LTR MaLR -125 240 146 734 158 0 0 chr20 35060115 35060235 -37093647 - FLAM_C SINE Alu -12 131 12 662 184 63 38 chr20 35060245 35060403 -37093479 - MLT1A1 LTR MaLR -200 165 4 311 239 217 29 chr20 35060594 35060732 -37093150 + MIR SINE MIR 51 214 -48 1618 114 121 15 chr20 35060748 35061021 -37092861 - AluSx SINE Alu -10 302 1 228 67 0 0 chr20 35061358 35061388 -37092494 + (T)n Simple_repeat Simple_repeat 1 30 0 268 319 78 17 chr20 35061460 35061576 -37092306 + MIR3 SINE MIR 15 137 -71 938 263 156 17 chr20 35062109 35062410 -37091472 - MER115 DNA AcHobo 0 693 351 184 304 59 20 chr20 35062652 35062754 -37091128 - L3 LINE CR1 -388 1189 1084 27 0 0 0 chr20 35064089 35064116 -37089766 + AT_rich Low_complexity Low_complexity 1 27 0 2312 118 100 10 chr20 35064367 35064756 -37089126 - MSTA LTR MaLR 0 428 5 2108 84 40 3 chr20 35064836 35065133 -37088749 - AluSx SINE Alu -4 308 1 248 278 216 14 chr20 35065284 35065431 -37088451 + MIR SINE MIR 37 214 -48 279 0 0 0 chr20 35066485 35066516 -37087366 + (TG)n Simple_repeat Simple_repeat 1 31 0 216 317 0 0 chr20 35066553 35066613 -37087269 - L2 LINE L2 0 3313 3254 364 301 123 24 chr20 35067448 35067630 -37086252 - MIR3 SINE MIR -12 196 1 585 270 124 11 chr20 35068137 35068322 -37085560 + MIR3 SINE MIR 3 208 0 227 217 0 0 chr20 35068948 35068994 -37084888 - MIR SINE MIR -115 147 102 354 205 0 0 chr20 35070606 35070684 -37083198 + (CGG)n Simple_repeat Simple_repeat 2 79 0 310 280 223 57 chr20 35071105 35071316 -37082566 + L3 LINE CR1 1298 1543 -34 412 280 65 34 chr20 35071352 35071585 -37082297 - MIR SINE MIR -13 249 8 249 297 99 22 chr20 35072381 35072472 -37081410 - L2 LINE L2 -93 3179 3082 304 299 28 83 chr20 35073264 35073408 -37080474 - MIR3 SINE MIR -72 136 1 200 213 21 0 chr20 35073416 35073463 -37080419 + CT-rich Low_complexity Low_complexity 1 48 0 209 348 152 21 chr20 35074099 35074389 -37079493 + L2 LINE L2 2526 2853 -461 190 254 51 17 chr20 35075781 35075840 -37078042 + MIR SINE MIR 89 149 -59 438 286 27 34 chr20 35076498 35076645 -37077237 + MIR3 SINE MIR 15 160 -48 858 241 161 57 chr20 35076669 35077055 -37076827 - MLT1H LTR MaLR -4 545 120 294 333 45 11 chr20 35077106 35077283 -37076599 + MER117 DNA MER1_type 15 197 0 190 368 23 23 chr20 35077369 35077456 -37076426 + MIR SINE MIR 17 103 -105 479 234 113 0 chr20 35077586 35077727 -37076155 - MLT1K LTR MaLR -5 583 427 840 231 6 0 chr20 35077728 35077888 -37075994 + AluJb SINE Alu 134 294 -18 659 217 213 21 chr20 35078072 35078480 -37075402 + MLT1G3 LTR MaLR 90 542 0 2280 53 0 4 chr20 35078548 35078829 -37075053 + AluY SINE Alu 2 281 -30 345 239 157 30 chr20 35079355 35079489 -37074393 + L2 LINE L2 2929 3079 -193 240 35 0 0 chr20 35079534 35079563 -37074319 + (CA)n Simple_repeat Simple_repeat 2 30 0 1218 159 35 22 chr20 35079572 35079799 -37074083 - AluJb SINE Alu -26 286 57 264 235 137 49 chr20 35080458 35080560 -37073322 - L2 LINE L2 -14 3299 3189 189 267 35 47 chr20 35080652 35080738 -37073144 - L2 LINE L2 -1576 1738 1654 2023 117 3 7 chr20 35080747 35081046 -37072836 + AluSx SINE Alu 1 298 -14 1667 109 8 23 chr20 35081107 35081364 -37072518 - AluSg SINE Alu -17 293 41 1677 157 3 17 chr20 35084307 35084606 -37069276 - AluJb SINE Alu -17 295 1 22 0 0 0 chr20 35084608 35084630 -37069252 + AT_rich Low_complexity Low_complexity 1 22 0 227 165 0 139 chr20 35084909 35084988 -37068894 + L1MB8 LINE L1 6044 6111 -67 2168 93 0 10 chr20 35084989 35085289 -37068593 + AluSx SINE Alu 1 297 -15 30 0 0 0 chr20 35085302 35085332 -37068550 + AT_rich Low_complexity Low_complexity 1 30 0 245 219 98 12 chr20 35085338 35085420 -37068462 - LTR9 LTR ERV1 -80 532 444 2311 73 10 0 chr20 35085945 35086247 -37067635 + AluY SINE Alu 2 306 -5 534 296 126 9 chr20 35086412 35086635 -37067247 + MIR SINE MIR 14 262 0 1626 167 11 7 chr20 35087451 35087733 -37066149 - AluJo SINE Alu -15 297 15 246 203 0 17 chr20 35088161 35088220 -37065662 + L1ME4a LINE L1 5719 5776 -345 236 269 130 34 chr20 35088420 35088866 -37065016 + L1ME4a LINE L1 5483 6016 -105 2061 90 10 13 chr20 35088866 35089166 -37064716 - AluSg SINE Alu -10 300 2 236 269 130 34 chr20 35089166 35089283 -37064599 + L1ME4a LINE L1 6016 6120 -1 337 228 140 9 chr20 35089309 35089423 -37064459 + L1ME4a LINE L1 5993 6121 0 1091 159 0 59 chr20 35089814 35090034 -37063848 + AluJo SINE Alu 89 295 -17 185 235 294 69 chr20 35090482 35090584 -37063298 + L2 LINE L2 3147 3271 -1 27 0 0 0 chr20 35091489 35091516 -37062366 + AT_rich Low_complexity Low_complexity 1 27 0 2270 77 3 3 chr20 35091519 35091818 -37062064 + AluSp SINE Alu 1 299 -14 831 151 0 27 chr20 35092236 35092382 -37061500 - FLAM_C SINE Alu 0 143 2 1956 117 45 0 chr20 35092643 35092934 -37060948 + AluSq SINE Alu 1 304 -9 1732 205 91 104 chr20 35093061 35093584 -37060298 - MER21B LTR ERV1 -69 794 281 2052 119 0 0 chr20 35093584 35093870 -37060012 - AluSx SINE Alu -26 286 1 1732 205 91 104 chr20 35093870 35094029 -37059853 - MER21B LTR ERV1 -582 281 121 475 203 80 58 chr20 35094072 35094210 -37059672 - MER21B LTR ERV1 -710 153 13 2013 99 33 0 chr20 35094718 35094991 -37058891 + AluSx SINE Alu 1 282 -30 1432 99 42 0 chr20 35094991 35095015 -37058867 + AluSq SINE Alu 1 306 0 2403 105 0 0 chr20 35095225 35095530 -37058352 - AluSx SINE Alu -7 305 1 2264 90 0 17 chr20 35097263 35097564 -37056318 - AluSc SINE Alu -13 296 1 195 42 0 0 chr20 35099053 35099077 -37054805 + (TTC)n Simple_repeat Simple_repeat 2 25 0 241 264 55 22 chr20 35099379 35099470 -37054412 - MIR3 SINE MIR -8 200 107 1715 179 17 3 chr20 35099474 35099775 -37054107 - AluJo SINE Alu -7 305 1 1703 181 10 10 chr20 35099980 35100284 -37053598 - AluJb SINE Alu -8 304 1 2344 85 10 0 chr20 35100455 35100749 -37053133 + AluY SINE Alu 1 297 -14 471 262 169 31 chr20 35100893 35101118 -37052764 + MIR SINE MIR 6 261 -1 834 184 114 6 chr20 35102492 35102650 -37051232 - FAM SINE Alu 0 175 1 1504 163 7 18 chr20 35102973 35103250 -37050632 + AluJo SINE Alu 39 312 0 1990 107 43 23 chr20 35103378 35103677 -37050205 + AluSg SINE Alu 1 305 -5 321 229 209 0 chr20 35103945 35104050 -37049832 + MIR3 SINE MIR 29 155 -53 373 250 81 16 chr20 35104492 35104616 -37049266 + MIR SINE MIR 61 192 -70 1006 187 129 4 chr20 35106477 35106702 -37047180 - MER90 LTR ERV1 -6 608 356 1212 96 34 17 chr20 35106702 35106880 -37047002 - AluSg/x SINE Alu -3 309 129 2212 121 3 0 chr20 35106901 35107208 -37046674 + AluSx SINE Alu 1 308 -4 231 114 0 0 chr20 35107210 35107245 -37046637 + (GGAA)n Simple_repeat Simple_repeat 4 38 0 189 0 0 0 chr20 35107278 35107299 -37046583 + (A)n Simple_repeat Simple_repeat 1 21 0 594 150 0 30 chr20 35107299 35107399 -37046483 - AluSg/x SINE Alu -91 221 125 2262 85 0 0 chr20 35107416 35107699 -37046183 + AluSc SINE Alu 1 283 -26 2355 66 3 33 chr20 35107718 35108021 -37045861 + AluSg SINE Alu 1 294 -16 2335 74 7 0 chr20 35108049 35108362 -37045520 - AluSp SINE Alu 0 315 1 924 202 32 18 chr20 35108364 35108582 -37045300 - MER90 LTR ERV1 -349 226 6 293 263 75 81 chr20 35108726 35108886 -37044996 - MIR SINE MIR -90 172 14 1240 131 13 85 chr20 35108967 35109203 -37044679 - MER20 DNA MER1_type 0 219 1 830 136 40 0 chr20 35109422 35109547 -37044335 + FLAM_C SINE Alu 1 130 -3 21 0 0 0 chr20 35109547 35109568 -37044314 + AT_rich Low_complexity Low_complexity 1 21 0 2343 80 0 10 chr20 35109685 35109985 -37043897 - AluY SINE Alu -14 297 1 180 0 0 0 chr20 35110418 35110438 -37043444 + (CA)n Simple_repeat Simple_repeat 2 21 0 294 292 0 14 chr20 35110643 35110715 -37043167 - MIR3 SINE MIR -125 83 13 632 258 65 18 chr20 35110883 35111100 -37042782 + L2 LINE L2 2393 2619 -695 356 201 74 116 chr20 35111112 35111301 -37042581 + L2 LINE L2 3119 3299 -14 2377 90 0 0 chr20 35111303 35111603 -37042279 + AluSx SINE Alu 1 300 -12 339 244 84 17 chr20 35112126 35112245 -37041637 + L2 LINE L2 3187 3313 0 971 130 0 0 chr20 35112424 35112555 -37041327 + FLAM_C SINE Alu 1 131 -12 371 328 90 20 chr20 35112848 35113049 -37040833 + L2 LINE L2 2843 3057 -215 1719 141 34 41 chr20 35113408 35113699 -37040183 - AluJo SINE Alu -11 301 13 346 183 0 28 chr20 35113829 35113891 -37039991 + L2 LINE L2 3201 3262 -10 1830 145 6 44 chr20 35113891 35114208 -37039674 + AluJo SINE Alu 1 305 -7 3655 155 45 60 chr20 35114286 35114552 -37039330 + L1MB2 LINE L1 5428 5696 -475 2335 103 0 6 chr20 35114552 35114863 -37039019 + AluSq SINE Alu 1 309 -4 3655 155 45 60 chr20 35114863 35115351 -37038531 + L1MB2 LINE L1 5696 6171 0 694 291 53 8 chr20 35116926 35117173 -37036709 - MIR SINE MIR -3 259 2 252 307 84 39 chr20 35117248 35117427 -37036455 - MIR SINE MIR -56 206 20 2197 119 3 13 chr20 35117476 35117788 -37036094 - AluSg SINE Alu -1 309 1 3574 249 107 60 chr20 35117857 35118892 -37034990 + HAL1 LINE L1 2 1144 -1363 1504 191 0 56 chr20 35118892 35119039 -37034843 + AluJo SINE Alu 1 124 -188 2325 90 0 0 chr20 35119039 35119373 -37034509 + AluY SINE Alu 1 334 0 1504 191 0 56 chr20 35119373 35119547 -37034335 + AluJo SINE Alu 124 306 -6 3574 249 107 60 chr20 35119547 35120160 -37033722 + HAL1 LINE L1 1144 1727 -780 1814 143 96 3 chr20 35120156 35120499 -37033383 + L1 LINE L1 4623 4997 -1149 * 1165 167 9 5 chr20 35120499 35120715 -37033167 + LTR5 LTR ERVK 1 217 -752 2554 69 0 0 chr20 35120726 35121029 -37032853 + AluY SINE Alu 1 303 -8 2382 64 0 0 chr20 35121029 35121309 -37032573 + AluY SINE Alu 17 296 -15 2835 186 28 64 chr20 35121311 35122087 -37031795 + LTR5 LTR ERVK 222 969 0 4256 162 18 21 chr20 35122087 35122632 -37031250 + HERVK LTR ERVK 1 545 -6698 2455 75 0 7 chr20 35122632 35122937 -37030945 + AluY SINE Alu 1 303 -8 4256 162 18 21 chr20 35122937 35123151 -37030731 + HERVK LTR ERVK 545 758 -6485 3588 131 33 14 chr20 35123221 35123802 -37030080 + HERVK LTR ERVK 733 1324 -5919 * 11998 81 5 0 chr20 35123790 35125338 -37028544 + HERVK LTR ERVK 3635 5189 -2054 195 42 0 0 chr20 35125342 35125366 -37028516 + (TCTCCC)n Simple_repeat Simple_repeat 2 25 0 6330 68 22 13 chr20 35125366 35126224 -37027658 + SVA Other Other 1 866 -520 6317 79 25 45 chr20 35126258 35127263 -37026619 + SVA Other Other 430 1414 0 12618 123 2 1 chr20 35127278 35129148 -37024734 + HERVK LTR ERVK 5533 7242 -1 3935 184 34 50 chr20 35129149 35130134 -37023748 + LTR5 LTR ERVK 1 969 0 6195 121 16 54 chr20 35130134 35130559 -37023323 + L1MA4A LINE L1 4992 5431 -872 1993 106 31 31 chr20 35130559 35130851 -37023031 + AluSq SINE Alu 1 292 -21 6195 121 16 54 chr20 35130851 35131273 -37022609 + L1MA4A LINE L1 5431 5867 -436 1789 164 3 14 chr20 35131273 35131566 -37022316 + AluJo SINE Alu 1 290 -22 6195 121 16 54 chr20 35131566 35131578 -37022304 + L1MA4A LINE L1 5867 5878 -425 2567 40 3 7 chr20 35131578 35131875 -37022007 + AluY SINE Alu 5 300 -11 6195 121 16 54 chr20 35131875 35131898 -37021984 + L1MA4A LINE L1 5878 5900 -403 2106 113 7 3 chr20 35131898 35132205 -37021677 + AluJb SINE Alu 1 308 0 6195 121 16 54 chr20 35132205 35132680 -37021202 + L1MA4A LINE L1 5900 6302 -1 730 229 103 60 chr20 35132681 35132982 -37020900 + HAL1 LINE L1 1775 2088 -419 636 198 56 0 chr20 35132982 35133108 -37020774 + FLAM_A SINE Alu 1 133 0 276 149 0 0 chr20 35133112 35133159 -37020723 + (GA)n Simple_repeat Simple_repeat 1 47 0 314 253 7 67 chr20 35133159 35133309 -37020573 + HAL1 LINE L1 2075 2215 -292 899 181 141 40 chr20 35133335 35133505 -37020377 + MSTA LTR MaLR 1 201 -227 2390 96 3 0 chr20 35133505 35133807 -37020075 + AluSg SINE Alu 1 303 -7 899 181 141 40 chr20 35133807 35133863 -37020019 + MSTA LTR MaLR 201 250 -178 4538 235 100 23 chr20 35133870 35134290 -37019592 - L1PBb LINE L1 -3549 3300 2914 2305 105 7 0 chr20 35134290 35134596 -37019286 - AluSq SINE Alu -5 308 1 4538 235 100 23 chr20 35134596 35134887 -37018995 - L1PBb LINE L1 -3935 2914 2647 1503 153 0 32 chr20 35134887 35135135 -37018747 + AluJo SINE Alu 56 295 -17 4538 235 100 23 chr20 35135135 35135963 -37017919 - L1PBb LINE L1 -4202 2647 1590 2083 102 3 56 chr20 35135963 35136267 -37017615 - AluSq SINE Alu -23 290 3 4538 235 100 23 chr20 35136267 35136444 -37017438 - L1PBb LINE L1 -5259 1590 1428 3670 200 37 28 chr20 35136927 35137259 -37016623 - L1PBb LINE L1 -6116 733 406 2456 35 0 17 chr20 35137259 35137548 -37016334 + AluY SINE Alu 22 305 -6 3670 200 37 28 chr20 35137548 35137940 -37015942 - L1PBb LINE L1 -6443 406 2 2098 90 7 28 chr20 35138128 35138298 -37015584 + AluSx SINE Alu 1 164 -148 2084 121 82 62 chr20 35138298 35138737 -37015145 - LTR7 LTR ERV1 -2 448 1 2098 90 7 28 chr20 35138737 35138854 -37015028 + AluSx SINE Alu 164 282 -30 639 264 67 67 chr20 35139016 35139315 -37014567 - MER101B LTR ERV1 -271 299 1 304 274 133 35 chr20 35139392 35139505 -37014377 - LTR49-int LTR ERV1 -1115 7005 6882 851 167 8 0 chr20 35139566 35139698 -37014184 + FLAM_C SINE Alu 1 133 0 1753 150 64 108 chr20 35139802 35139829 -37014053 - LTR49-int LTR ERV1 -1830 4501 4474 1404 186 89 36 chr20 35139829 35140109 -37013773 + AluJb SINE Alu 2 296 -6 1753 150 64 108 chr20 35140109 35140494 -37013388 - LTR49-int LTR ERV1 -1857 4474 4146 2300 81 3 16 chr20 35140494 35140801 -37013081 + AluSg SINE Alu 1 303 -7 1753 150 64 108 chr20 35140801 35140919 -37012963 - LTR49-int LTR ERV1 -2185 4146 4024 295 181 60 84 chr20 35140918 35141001 -37012881 - LTR49-int LTR ERV1 -2680 3918 3838 * 195 42 0 0 chr20 35141001 35141025 -37012857 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2285 74 7 14 chr20 35141028 35141313 -37012569 - AluY SINE Alu -28 283 1 1809 221 53 40 chr20 35141314 35141671 -37012211 - LTR49-int LTR ERV1 -2557 2566 2215 2196 121 7 0 chr20 35141671 35141976 -37011906 - AluSx SINE Alu -5 307 1 1809 221 53 40 chr20 35141976 35142444 -37011438 - LTR49-int LTR ERV1 -2908 2215 1707 24 0 0 0 chr20 35142465 35142489 -37011393 + AT_rich Low_complexity Low_complexity 1 24 0 2468 83 0 13 chr20 35142543 35142857 -37011025 - AluSg SINE Alu 0 310 1 944 286 100 24 chr20 35142860 35143189 -37010693 - L1MEd LINE L1 -5408 711 358 2205 115 0 20 chr20 35143353 35143657 -37010225 - AluSx SINE Alu -14 298 1 243 125 0 0 chr20 35143684 35143724 -37010158 + (GA)n Simple_repeat Simple_repeat 1 40 0 449 260 16 0 chr20 35143735 35143862 -37010020 - L1MEd LINE L1 -5985 134 6 295 203 0 14 chr20 35144614 35144683 -37009199 - L2 LINE L2 -314 2958 2891 1898 159 0 0 chr20 35144831 35145121 -37008761 - AluSx SINE Alu -22 290 1 383 200 72 72 chr20 35145145 35145270 -37008612 - L1ME1 LINE L1 -2 6162 6038 742 72 9 9 chr20 35145335 35145446 -37008436 + (TTCC)n Simple_repeat Simple_repeat 2 112 0 807 205 6 18 chr20 35145450 35145615 -37008267 - AluJo SINE Alu -25 287 124 5325 61 56 129 chr20 35145615 35146506 -37007376 + LTR12 LTR ERV1 1 826 0 14053 103 10 14 chr20 35146554 35149396 -37004486 + HERV9 LTR ERV1 58 2972 -5427 1041 133 7 0 chr20 35149395 35149546 -37004336 + HERV9 LTR ERV1 4756 4907 -3492 * 394 174 33 0 chr20 35149546 35149638 -37004244 + HERV9 LTR ERV1 4865 4959 -3440 2024 97 12 29 chr20 35149640 35150452 -37003430 + HERV17 LTR ERV1 704 1720 -5176 * 4919 88 2 0 chr20 35150447 35151085 -37002797 + HERV17 LTR ERV1 7757 8395 -4 4495 77 113 3 chr20 35151089 35151709 -37002173 + LTR12 LTR ERV1 1 688 0 1115 183 32 137 chr20 35151711 35151985 -37001897 - L1ME1 LINE L1 -126 6040 5739 1210 164 67 103 chr20 35151985 35152098 -37001784 + AluJo SINE Alu 3 118 -194 189 0 0 0 chr20 35152098 35152119 -37001763 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 1210 164 67 103 chr20 35152119 35152163 -37001719 + AluJo SINE Alu 118 162 -150 3834 179 33 51 chr20 35152163 35153112 -37000770 + LTR5 LTR ERVK 1 932 -37 1210 164 67 103 chr20 35153112 35153265 -37000617 + AluJo SINE Alu 162 303 -9 1115 183 32 137 chr20 35153265 35153400 -37000482 - L1ME1 LINE L1 -427 5739 5674 409 261 108 62 chr20 35153503 35153679 -37000203 + MLT1K LTR MaLR 142 325 -263 1417 98 0 16 chr20 35153968 35153983 -36999899 + AluSg/x SINE Alu 121 135 -177 2424 99 0 3 chr20 35153983 35154297 -36999585 + AluSq SINE Alu 1 313 0 1417 98 0 16 chr20 35154297 35154474 -36999408 + AluSg/x SINE Alu 135 310 -2 2190 123 28 36 chr20 35154512 35154783 -36999099 - MLT1B LTR MaLR 0 390 121 1684 197 0 3 chr20 35154783 35155078 -36998804 - AluJo SINE Alu -18 294 1 2190 123 28 36 chr20 35155078 35155163 -36998719 - MLT1B LTR MaLR -269 121 37 1641 112 18 0 chr20 35155179 35155402 -36998480 - AluSx SINE Alu -13 297 71 2292 94 7 7 chr20 35155402 35155698 -36998184 - AluSq SINE Alu -16 297 1 528 179 0 0 chr20 35155699 35155783 -36998099 - AluSx SINE Alu -227 85 2 228 146 0 24 chr20 35155784 35155825 -36998057 - MLT1B LTR MaLR -348 42 3 2467 81 0 0 chr20 35156006 35156302 -36997580 - AluSg SINE Alu -14 296 1 874 144 0 0 chr20 35156326 35156444 -36997438 - FLAM_C SINE Alu -18 125 8 1988 150 7 7 chr20 35156463 35156769 -36997113 - AluSx SINE Alu -6 306 1 322 316 47 18 chr20 35156769 35156932 -36996950 - L2 LINE L2 -564 2750 2580 1110 122 28 28 chr20 35157085 35157265 -36996617 - LTR9 LTR ERV1 -432 180 1 364 285 89 0 chr20 35157275 35157433 -36996449 + MIR SINE MIR 21 192 -70 2395 97 0 0 chr20 35157439 35157747 -36996135 + AluSq SINE Alu 4 311 -2 1954 125 76 0 chr20 35157784 35158072 -36995810 - AluJb SINE Alu -2 310 1 213 311 33 0 chr20 35158076 35158166 -36995716 - MIR SINE MIR -70 192 100 213 256 0 44 chr20 35158561 35158651 -36995231 + A-rich Low_complexity Low_complexity 2 87 0 409 308 39 6 chr20 35158898 35159054 -36994828 - L2 LINE L2 -236 3036 2876 189 0 0 0 chr20 35159087 35159108 -36994774 + (A)n Simple_repeat Simple_repeat 1 21 0 1987 153 16 0 chr20 35159322 35159629 -36994253 - AluJb SINE Alu 0 312 1 2294 113 0 0 chr20 35159817 35160118 -36993764 - AluSg SINE Alu -9 301 1 834 211 0 0 chr20 35160427 35160593 -36993289 + FRAM SINE Alu 1 166 -10 1884 117 55 10 chr20 35160612 35160903 -36992979 - AluSx SINE Alu -8 304 1 713 221 13 25 chr20 35161038 35161196 -36992686 - L2 LINE L2 0 3313 3158 2532 53 0 10 chr20 35161460 35161761 -36992121 - AluY SINE Alu -13 298 1 1492 167 65 18 chr20 35161769 35162045 -36991837 - AluJo SINE Alu -23 289 1 2137 112 3 0 chr20 35162071 35162386 -36991496 + AluSp SINE Alu 1 316 0 1822 88 0 13 chr20 35162387 35162625 -36991257 + AluY SINE Alu 57 291 -20 2035 136 7 3 chr20 35162769 35163078 -36990804 - AluSg SINE Alu 0 310 1 2309 80 0 35 chr20 35163078 35163391 -36990491 - AluSc SINE Alu -6 303 1 2315 117 0 0 chr20 35163394 35163703 -36990179 - AluSx SINE Alu -3 309 1 2139 91 3 57 chr20 35164837 35165155 -36988727 - AluSg SINE Alu -9 301 1 1001 133 0 0 chr20 35165160 35165303 -36988579 - FLAM_C SINE Alu 0 143 1 953 183 101 82 chr20 35165879 35166108 -36987774 + MER4C LTR ERV1 1 224 -241 2576 39 0 10 chr20 35166108 35166420 -36987462 + AluY SINE Alu 1 309 -2 953 183 101 82 chr20 35166420 35166725 -36987157 + MER4C LTR ERV1 224 465 0 2368 65 7 3 chr20 35166971 35167261 -36986621 + AluY SINE Alu 1 291 -20 350 250 48 0 chr20 35167795 35167899 -36985983 + L1MEc LINE L1 404 512 -5884 1925 237 39 39 chr20 35167901 35168590 -36985292 + L1MEc LINE L1 766 1454 -4942 207 398 8 8 chr20 35168590 35168718 -36985164 + L2 LINE L2 2564 2691 -623 2307 85 0 26 chr20 35169173 35169480 -36984402 + AluSc SINE Alu 1 299 -10 222 242 8 153 chr20 35170390 35170514 -36983368 + MER5A DNA MER1_type 56 161 -28 690 128 103 17 chr20 35170915 35171032 -36982850 - FLAM_A SINE Alu -6 127 1 181 143 48 24 chr20 35171044 35171086 -36982796 - L2 LINE L2 -3 3310 3268 268 271 0 12 chr20 35171133 35171218 -36982664 - MLT1J LTR MaLR -33 478 395 572 242 114 0 chr20 35171291 35171440 -36982442 - MER69A DNA AcHobo -11 166 1 1350 163 67 8 chr20 35171497 35171737 -36982145 + AluJo SINE Alu 29 282 -30 1895 130 60 11 chr20 35171745 35172030 -36981852 - AluSx SINE Alu -13 299 1 2372 76 0 0 chr20 35172050 35172340 -36981542 - AluY SINE Alu -19 292 3 278 229 50 142 chr20 35172451 35172501 -36981381 - MER83B LTR ERV1 -29 349 296 2456 84 0 0 chr20 35172501 35172811 -36981071 + AluSg SINE Alu 1 310 0 278 229 50 142 chr20 35172811 35172921 -36980961 - MER83B LTR ERV1 -82 296 212 2357 85 0 13 chr20 35172921 35173227 -36980655 - AluSg SINE Alu -7 303 2 278 229 50 142 chr20 35173227 35173283 -36980599 - MER83B LTR ERV1 -166 212 152 764 212 53 18 chr20 35173871 35174041 -36979841 + MER58A DNA MER1_type 1 176 -48 2182 124 3 0 chr20 35174198 35174497 -36979385 + AluSg SINE Alu 1 300 -10 2552 91 51 6 chr20 35174997 35175347 -36978535 - MER51B LTR ERV1 -11 366 1 2133 112 40 16 chr20 35175446 35175749 -36978133 - AluSx SINE Alu -2 310 1 251 121 0 0 chr20 35175764 35175797 -36978085 + L1MC5 LINE L1 6731 6763 -1198 679 177 115 0 chr20 35175802 35175932 -36977950 - MER46A DNA MER2_type -91 145 1 1749 181 3 3 chr20 35176245 35176538 -36977344 - AluJb SINE Alu -15 297 5 221 230 93 108 chr20 35176875 35177014 -36976868 - MIR SINE MIR -30 232 96 298 256 120 0 chr20 35177222 35177339 -36976543 - L2 LINE L2 -6 3307 3177 2219 121 0 0 chr20 35177364 35177670 -36976212 + AluSq SINE Alu 1 306 -7 463 173 0 55 chr20 35178031 35178141 -36975741 + FLAM_A SINE Alu 38 141 -1 2803 13 0 0 chr20 35178396 35178696 -36975186 + AluY SINE Alu 1 300 -11 558 259 141 0 chr20 35179368 35179538 -36974344 - MIR SINE MIR -13 249 56 1677 80 27 27 chr20 35180357 35180611 -36973271 - AluSc SINE Alu 0 310 57 1239 218 78 74 chr20 35181854 35182369 -36971513 - MER113 DNA MER1_type? -3 518 2 265 242 267 8 chr20 35182647 35182767 -36971115 - MIR SINE MIR -74 188 38 2470 77 3 0 chr20 35182798 35183097 -36970785 - AluSp SINE Alu -13 300 1 463 352 48 15 chr20 35183950 35184223 -36969659 + L2 LINE L2 2127 2408 -906 260 109 0 22 chr20 35185229 35185275 -36968607 + (TTCC)n Simple_repeat Simple_repeat 4 48 0 2296 107 7 3 chr20 35185286 35185586 -36968296 - AluSq SINE Alu -12 301 1 2094 111 37 0 chr20 35185589 35185886 -36967996 - AluSp SINE Alu -5 308 1 728 168 148 7 chr20 35185886 35186041 -36967841 - AluJo SINE Alu -18 294 118 231 204 0 0 chr20 35186041 35186090 -36967792 + T-rich Low_complexity Low_complexity 1 49 0 1609 124 36 7 chr20 35186377 35186651 -36967231 - L1MA4 LINE L1 -7 6293 6012 275 284 0 12 chr20 35188416 35188497 -36965385 + CT-rich Low_complexity Low_complexity 3 82 0 184 30 61 0 chr20 35189341 35189374 -36964508 + T-rich Low_complexity Low_complexity 126 160 0 2655 36 20 0 chr20 35189725 35190028 -36963854 - AluY SINE Alu -2 309 1 22 0 0 0 chr20 35190543 35190565 -36963317 + AT_rich Low_complexity Low_complexity 1 22 0 2065 119 42 0 chr20 35190648 35190934 -36962948 + AluSg SINE Alu 1 298 -12 1601 138 24 102 chr20 35191612 35191945 -36961937 - AluYb8 SINE Alu -11 307 1 1877 152 28 0 chr20 35192045 35192334 -36961548 - AluJo SINE Alu -15 297 1 2682 210 69 72 chr20 35192344 35193301 -36960581 - L1ME3A LINE L1 -1 6238 5285 1235 177 4 17 chr20 35193301 35193538 -36960344 - MER96B DNA MER1_type? -181 236 3 237 246 34 68 chr20 35193539 35193657 -36960225 - L1ME3A LINE L1 -927 5288 5175 798 109 0 0 chr20 35194504 35194623 -36959259 + (TTTC)n Simple_repeat Simple_repeat 2 120 0 23 54 0 0 chr20 35195613 35195650 -36958232 + AT_rich Low_complexity Low_complexity 1 37 0 531 202 54 62 chr20 35195736 35195865 -36958017 + MER3 DNA MER1_type 2 129 -80 29 28 0 0 chr20 35195974 35196010 -36957872 + AT_rich Low_complexity Low_complexity 1 36 0 2152 251 68 50 chr20 35196049 35196354 -36957528 - L1ME3A LINE L1 -1147 5068 4770 2386 61 0 0 chr20 35196354 35196650 -36957232 - AluY SINE Alu -2 309 14 2152 251 68 50 chr20 35196650 35196939 -36956943 - L1ME3A LINE L1 -1445 4770 4487 182 37 37 0 chr20 35196939 35196966 -36956916 + (TA)n Simple_repeat Simple_repeat 2 29 0 1793 154 3 0 chr20 35196966 35197252 -36956630 - AluSx SINE Alu -25 287 1 2152 251 68 50 chr20 35197252 35197272 -36956610 - L1ME3A LINE L1 -1728 4487 4469 2125 91 10 13 chr20 35197272 35197579 -36956303 - AluSq SINE Alu -7 306 1 2152 251 68 50 chr20 35197579 35197769 -36956113 - L1ME3A LINE L1 -1746 4469 4284 2140 112 7 0 chr20 35197769 35198074 -36955808 - AluSp SINE Alu -6 307 1 2152 251 68 50 chr20 35198074 35198374 -36955508 - L1ME3A LINE L1 -1931 4284 3941 5720 149 49 45 chr20 35198385 35198616 -36955266 - L1MA4 LINE L1 0 6300 6071 4957 77 50 131 chr20 35198616 35199515 -36954367 - LTR12 LTR ERV1 0 826 1 5720 149 49 45 chr20 35199515 35199545 -36954337 - L1MA4 LINE L1 -229 6071 6043 1976 128 3 13 chr20 35199545 35199851 -36954031 - AluSx SINE Alu -9 303 1 5720 149 49 45 chr20 35199851 35200122 -36953760 - L1MA4 LINE L1 -257 6043 5774 1983 125 30 10 chr20 35200122 35200426 -36953456 - AluSg SINE Alu 0 310 1 5720 149 49 45 chr20 35200426 35201323 -36952559 - L1MA4 LINE L1 -526 5774 4882 2019 78 45 0 chr20 35201323 35201632 -36952250 - AluY SINE Alu 0 321 1 5720 149 49 45 chr20 35201632 35201901 -36951981 - L1MA4 LINE L1 -1418 4882 4615 1732 164 6 13 chr20 35201901 35202212 -36951670 - AluJb SINE Alu -3 309 1 5720 149 49 45 chr20 35202212 35202697 -36951185 - L1MA4 LINE L1 -1685 4615 4120 7262 184 150 34 chr20 35202697 35204270 -36949612 + MER52A LTR ERV1 1 1755 0 713 132 0 0 chr20 35204270 35204376 -36949506 - L1MA4 LINE L1 -2023 4123 4018 524 270 25 15 chr20 35204378 35204578 -36949304 - L1ME3A LINE L1 -2267 3948 3747 1369 144 3 129 chr20 35204578 35204918 -36948964 - AluJo SINE Alu -15 297 1 838 308 88 32 chr20 35204921 35205742 -36948140 - L1ME3A LINE L1 -4465 1931 1065 923 190 106 127 chr20 35205753 35206311 -36947571 - L1MC4 LINE L1 -1 8041 7496 431 196 87 87 chr20 35206334 35206553 -36947329 - L1MC4a LINE L1 -550 7258 7080 1367 206 107 50 chr20 35206562 35206926 -36946956 + MSTD LTR MaLR 12 396 0 581 192 17 17 chr20 35206928 35207048 -36946834 + MSTD-int LTR MaLR 2 121 -1614 1611 245 103 4 chr20 35209931 35210483 -36943399 - L1M4 LINE L1 -925 5221 4615 2050 124 0 0 chr20 35210711 35211018 -36942864 + AluSx SINE Alu 1 307 -5 2280 42 0 7 chr20 35211110 35211418 -36942464 - AluY SINE Alu 0 306 1 325 286 53 70 chr20 35211521 35211692 -36942190 - L1ME3A LINE L1 -5901 304 137 2016 72 69 4 chr20 35212242 35212518 -36941364 - AluY SINE Alu -17 294 1 482 344 92 13 chr20 35212821 35213048 -36940834 - MIR SINE MIR 0 262 18 200 269 139 56 chr20 35213289 35213364 -36940518 - L2 LINE L2 -7 3265 3177 2421 48 0 3 chr20 35213364 35213657 -36940225 + AluY SINE Alu 2 293 -18 200 269 139 56 chr20 35213657 35213689 -36940193 - L2 LINE L2 -95 3177 3149 2050 118 7 0 chr20 35213870 35214167 -36939715 + AluJb SINE Alu 1 299 -13 270 176 0 0 chr20 35214484 35214535 -36939347 + T-rich Low_complexity Low_complexity 1 51 0 2453 65 0 0 chr20 35214652 35214960 -36938922 + AluY SINE Alu 1 308 -3 1975 136 0 7 chr20 35215383 35215697 -36938185 + AluJb SINE Alu 1 312 0 313 293 75 28 chr20 35216067 35216173 -36937709 - MER5A DNA MER1_type -44 145 35 336 24 0 0 chr20 35216181 35216222 -36937660 + (TCTCCC)n Simple_repeat Simple_repeat 1 41 0 6998 62 11 16 chr20 35216222 35217793 -36936089 + SVA Other Other 57 1386 0 2029 107 4 0 chr20 35218591 35218894 -36934988 - AluSg SINE Alu 0 304 1 418 266 114 44 chr20 35218895 35219414 -36934468 - L1M4 LINE L1 -1275 4871 4317 2137 105 3 13 chr20 35219448 35219752 -36934130 - AluSx SINE Alu -11 301 1 4097 200 70 34 chr20 35219807 35219903 -36933979 + L1ME LINE L1 3851 3942 -2204 2085 121 0 13 chr20 35219903 35220209 -36933673 - AluSx SINE Alu -10 302 1 4097 200 70 34 chr20 35220209 35220311 -36933571 + L1ME LINE L1 3942 4039 -2107 866 142 0 8 chr20 35220311 35220445 -36933437 - FLAM_C SINE Alu 0 133 1 4097 200 70 34 chr20 35220445 35220906 -36932976 + L1ME LINE L1 4039 4482 -1664 2313 88 0 0 chr20 35220906 35221202 -36932680 + AluSc SINE Alu 1 296 -13 4097 200 70 34 chr20 35221202 35221687 -36932195 + L1ME LINE L1 4482 5038 -1108 343 277 75 36 chr20 35221688 35221832 -36932050 - L1M4 LINE L1 -4037 2607 1191 6596 53 10 48 chr20 35222136 35223128 -36930754 - SVA Other Other 0 1386 433 2631 86 21 98 chr20 35223235 35224885 -36928997 - SVA Other Other -518 868 393 21 36 0 0 chr20 35224936 35224964 -36928918 + GC_rich Low_complexity Low_complexity 1 28 0 1136 200 95 7 chr20 35224975 35225445 -36928437 + L1ME LINE L1 5030 5531 -635 2010 217 42 13 chr20 35225445 35225897 -36927985 - LTR40c LTR ERVL 0 465 1 1292 210 89 11 chr20 35225899 35226180 -36927702 - HERVL40 LTR ERVL -2 5528 5226 * 2052 258 25 13 chr20 35226175 35226699 -36927183 - HERVL40 LTR ERVL -558 4972 4443 2361 82 0 0 chr20 35226699 35227002 -36926880 - AluY SINE Alu -8 303 1 569 93 98 0 chr20 35227003 35227162 -36926720 + L1MB7 LINE L1 5845 6181 -3 3005 243 77 33 chr20 35227164 35227992 -36925890 - HERVL40 LTR ERVL -1570 3960 3096 377 195 0 11 chr20 35228016 35228103 -36925779 + CT-rich Low_complexity Low_complexity 4 89 0 236 156 0 0 chr20 35228124 35228156 -36925726 + Tigger3(Golem) DNA MER2_type 33 64 -2965 1438 93 17 51 chr20 35228156 35228392 -36925490 + AluSg/x SINE Alu 80 307 -3 3253 120 40 24 chr20 35228393 35228715 -36925167 + Tigger3(Golem) DNA MER2_type 338 672 -2357 2211 99 0 0 chr20 35228715 35229017 -36924865 + AluSg SINE Alu 1 302 -8 3253 120 40 24 chr20 35229017 35229193 -36924689 + Tigger3(Golem) DNA MER2_type 672 844 -2185 806 203 25 6 chr20 35229193 35229376 -36924506 + FRAM SINE Alu 1 235 -242 1145 72 6 22 chr20 35229376 35229557 -36924325 + (GGAA)n Simple_repeat Simple_repeat 2 179 0 806 203 25 6 chr20 35229557 35229667 -36924215 + FRAM SINE Alu 235 341 0 332 203 16 0 chr20 35229667 35229731 -36924151 + GA-rich Low_complexity Low_complexity 5 69 0 1025 122 52 103 chr20 35229731 35229813 -36924069 + Tigger3(Golem) DNA MER2_type 831 916 -2113 2248 86 0 17 chr20 35229813 35230115 -36923767 + AluSq SINE Alu 1 297 -16 767 152 8 8 chr20 35230125 35230250 -36923632 + FLAM_C SINE Alu 2 126 -7 1025 122 52 103 chr20 35230250 35230369 -36923513 + Tigger3(Golem) DNA MER2_type 925 1032 -1997 4506 186 80 40 chr20 35230372 35231483 -36922399 - L1 LINE L1 -1110 5036 3882 * 5007 129 32 36 chr20 35231468 35232435 -36921447 - L1M4c LINE L1 -4759 1625 663 989 167 42 0 chr20 35232435 35232603 -36921279 - L1M4c LINE L1 -6206 178 4 1777 78 62 0 chr20 35232791 35233034 -36920848 - AluSq SINE Alu -17 296 39 353 262 148 8 chr20 35233099 35233274 -36920608 - MIR SINE MIR -11 251 35 2129 156 46 85 chr20 35233493 35233973 -36919909 - MER65C LTR ERV1 0 461 1 305 24 24 0 chr20 35235748 35235790 -36918092 + (TTTTA)n Simple_repeat Simple_repeat 3 45 0 2078 114 7 0 chr20 35235799 35236088 -36917794 - AluSx SINE Alu -21 291 1 24 32 0 0 chr20 35237301 35237332 -36916550 + AT_rich Low_complexity Low_complexity 1 31 0 2392 35 0 3 chr20 35237339 35237645 -36916237 + AluY SINE Alu 2 306 0 518 294 62 44 chr20 35238058 35238378 -36915504 - L1ME4a LINE L1 -281 5840 5515 2283 84 0 0 chr20 35238609 35238906 -36914976 + AluSg SINE Alu 1 297 -13 2142 91 3 10 chr20 35238946 35239243 -36914639 - AluSg SINE Alu -14 296 2 190 93 23 23 chr20 35239397 35239440 -36914442 + (TA)n Simple_repeat Simple_repeat 1 43 0 203 269 26 13 chr20 35239771 35239849 -36914033 + CT-rich Low_complexity Low_complexity 2 80 0 1433 127 40 4 chr20 35240085 35240313 -36913569 - AluSx SINE Alu -76 236 1 232 256 26 13 chr20 35240386 35240464 -36913418 + T-rich Low_complexity Low_complexity 3 81 0 993 164 0 0 chr20 35240536 35240701 -36913181 - AluJb SINE Alu 0 312 148 2221 91 7 0 chr20 35240856 35241152 -36912730 - AluSg SINE Alu -12 298 1 1588 159 47 4 chr20 35241172 35241448 -36912434 - AluJo SINE Alu -20 292 5 2088 102 3 0 chr20 35241479 35241772 -36912110 + AluSx SINE Alu 1 294 -18 270 292 80 15 chr20 35241776 35241913 -36911969 + MARNA DNA Mariner 398 543 -43 305 286 154 60 chr20 35241937 35242076 -36911806 + MARNA DNA Mariner 216 377 -209 1734 167 10 0 chr20 35242076 35242375 -36911507 + AluJo SINE Alu 1 302 -10 305 286 154 60 chr20 35242375 35242417 -36911465 + MARNA DNA Mariner 377 414 -172 1358 126 0 50 chr20 35242474 35242696 -36911186 + AluSg/x SINE Alu 84 294 -18 475 292 0 0 chr20 35242701 35242814 -36911068 - MIR3 SINE MIR -51 157 45 721 200 80 0 chr20 35243078 35243228 -36910654 + MER45A DNA AcHobo 5 166 -12 698 173 16 16 chr20 35243944 35244071 -36909811 + FLAM_A SINE Alu 1 127 -6 1677 87 5 0 chr20 35244071 35244290 -36909592 + AluSx SINE Alu 1 220 -92 2274 64 0 13 chr20 35244831 35245129 -36908753 - AluY SINE Alu -17 294 1 1975 176 37 3 chr20 35245199 35245552 -36908330 + MLT1A1 LTR MaLR 1 365 0 4156 178 28 64 chr20 35245667 35246665 -36907217 - LTR5 LTR ERVK 0 969 8 2405 74 7 3 chr20 35246665 35246961 -36906921 - AluY SINE Alu -14 297 1 2078 125 10 0 chr20 35246988 35247321 -36906561 - AluSx SINE Alu 0 312 5 2183 117 0 0 chr20 35247606 35247918 -36905964 - AluSx SINE Alu 0 312 1 698 225 36 110 chr20 35247990 35248355 -36905527 + MER46C DNA MER2_type 1 338 0 1234 185 4 66 chr20 35248904 35249011 -36904871 - AluJb SINE Alu -69 243 131 6719 102 20 13 chr20 35249011 35250007 -36903875 + LTR13 LTR ERVK 1 1003 -4 1234 185 4 66 chr20 35250007 35250158 -36903724 - AluJb SINE Alu -181 131 1 934 183 0 30 chr20 35250334 35250503 -36903379 - AluJb SINE Alu -15 297 134 290 47 47 0 chr20 35250582 35250625 -36903257 + (TTTC)n Simple_repeat Simple_repeat 4 48 0 1972 116 39 29 chr20 35250629 35250939 -36902943 - AluSq SINE Alu 0 313 1 34 42 0 0 chr20 35251081 35251129 -36902753 + AT_rich Low_complexity Low_complexity 1 48 0 2372 123 0 0 chr20 35251417 35251727 -36902155 + AluSx SINE Alu 1 310 -2 699 168 87 0 chr20 35251818 35251967 -36901915 - MER58C DNA MER1_type -2 213 52 218 31 0 31 chr20 35252230 35252262 -36901620 + (TA)n Simple_repeat Simple_repeat 2 32 0 322 238 22 84 chr20 35252262 35252456 -36901426 + L1MCa LINE L1 1933 2091 -4335 1547 168 18 36 chr20 35252510 35252790 -36901092 + AluJb SINE Alu 35 309 -3 1931 111 0 11 chr20 35252830 35253100 -36900782 + AluSx SINE Alu 45 311 -1 1445 141 0 19 chr20 35253105 35253318 -36900564 + AluSq SINE Alu 87 295 -18 220 348 6 6 chr20 35253676 35253776 -36900106 + CT-rich Low_complexity Low_complexity 1 100 0 412 198 10 21 chr20 35254290 35254386 -36899496 - MER103 DNA DNA -71 95 1 533 321 12 0 chr20 35254572 35254737 -36899145 - MIR SINE MIR -93 169 3 1893 128 7 49 chr20 35254771 35254918 -36898964 + AluJo SINE Alu 1 130 -182 2025 148 0 0 chr20 35254918 35255208 -36898674 + AluJb SINE Alu 12 301 -11 1893 128 7 49 chr20 35255208 35255365 -36898517 + AluJo SINE Alu 130 292 -20 2393 119 0 0 chr20 35255386 35255696 -36898186 + AluSx SINE Alu 1 310 -2 598 280 70 5 chr20 35255739 35255953 -36897929 - MIR SINE MIR -7 255 28 319 191 101 0 chr20 35256738 35256827 -36897055 + MER113 DNA MER1_type? 3 100 -421 2382 80 19 16 chr20 35256838 35257150 -36896732 + AluSq SINE Alu 1 313 0 3541 168 40 15 chr20 35257152 35257217 -36896665 + Tigger2 DNA MER2_type 1 63 -2655 2244 110 0 10 chr20 35257217 35257526 -36896356 - AluSq SINE Alu -7 306 1 3541 168 40 15 chr20 35257526 35258186 -36895696 + Tigger2 DNA MER2_type 63 744 -1974 1209 112 24 80 chr20 35258306 35258345 -36895537 + Tigger2 DNA MER2_type 2483 2523 -195 1842 187 3 0 chr20 35258345 35258650 -36895232 - AluJb SINE Alu -6 306 1 1209 112 24 80 chr20 35258650 35258796 -36895086 + Tigger2 DNA MER2_type 2523 2653 -65 2071 153 0 3 chr20 35258796 35259090 -36894792 + AluJb SINE Alu 1 293 -19 1209 112 24 80 chr20 35259090 35259153 -36894729 + Tigger2 DNA MER2_type 2653 2718 0 1042 184 100 102 chr20 35259153 35259223 -36894659 + MER113 DNA MER1_type? 147 216 -305 2289 109 7 0 chr20 35259223 35259517 -36894365 + AluSx SINE Alu 1 296 -16 1042 184 100 102 chr20 35259517 35259627 -36894255 + MER113 DNA MER1_type? 216 325 -196 2414 74 10 10 chr20 35259627 35259937 -36893945 + AluY SINE Alu 1 310 -1 2217 113 0 0 chr20 35259946 35260253 -36893629 + AluSx SINE Alu 1 307 0 1042 184 100 102 chr20 35260253 35260436 -36893446 + MER113 DNA MER1_type? 333 521 0 218 320 51 0 chr20 35260554 35260632 -36893250 + MIR3 SINE MIR 82 163 -45 516 239 150 49 chr20 35260668 35260894 -36892988 - L2 LINE L2 -50 3263 3015 370 201 7 0 chr20 35260924 35261005 -36892877 + AluS SINE Alu 1 60 -243 180 0 0 0 chr20 35261015 35261035 -36892847 + (A)n Simple_repeat Simple_repeat 1 20 0 747 198 95 21 chr20 35261035 35261084 -36892798 - Charlie5 DNA MER1_type -11 2613 2569 2259 97 10 7 chr20 35261084 35261384 -36892498 - AluSp SINE Alu -10 303 3 747 198 95 21 chr20 35261384 35261576 -36892306 - Charlie5 DNA MER1_type -55 2569 2354 786 133 50 50 chr20 35261584 35261764 -36892118 - Charlie5 DNA MER1_type -2424 188 9 1861 131 9 58 chr20 35261991 35262319 -36891563 + AluJb SINE Alu 1 312 0 186 102 20 41 chr20 35263191 35263218 -36890664 + (GAAA)n Simple_repeat Simple_repeat 1 28 -20 2434 76 6 10 chr20 35263218 35263532 -36890350 + AluSp SINE Alu 1 313 0 186 102 20 41 chr20 35263532 35263553 -36890329 + (GAAA)n Simple_repeat Simple_repeat 28 48 0 1493 146 0 62 chr20 35263554 35263828 -36890054 + AluJo SINE Alu 47 303 -9 441 274 106 0 chr20 35264194 35264307 -36889575 - L2 LINE L2 0 3272 3148 881 144 0 0 chr20 35264381 35264513 -36889369 - FLAM_C SINE Alu -1 132 1 1424 146 130 0 chr20 35264523 35264793 -36889089 - AluSx SINE Alu 0 306 5 2252 113 3 3 chr20 35265121 35265421 -36888461 - AluSx SINE Alu -12 300 1 250 191 32 16 chr20 35265474 35265537 -36888345 - LTR67 LTR ERVL -3 554 491 3496 170 48 27 chr20 35265800 35266160 -36887722 - MER21B LTR ERV1 -1 862 511 1860 141 74 0 chr20 35266160 35266444 -36887438 + AluJo SINE Alu 1 305 -7 3496 170 48 27 chr20 35266444 35266777 -36887105 - MER21B LTR ERV1 -352 511 155 270 172 31 16 chr20 35266858 35266922 -36886960 + LTR67 LTR ERVL 490 554 -3 414 200 47 11 chr20 35266968 35267086 -36886796 - AluS SINE Alu -235 68 1 186 237 0 0 chr20 35267758 35267796 -36886086 - L2 LINE L2 -11 3302 3265 302 336 72 24 chr20 35267839 35267964 -36885918 - MIR SINE MIR -125 137 7 1945 127 7 25 chr20 35268224 35268507 -36885375 + AluJo SINE Alu 5 282 -30 271 262 206 0 chr20 35268514 35268621 -36885261 + MIR3 SINE MIR 37 165 -43 2523 72 3 0 chr20 35268682 35268987 -36884895 - AluSx SINE Alu -6 306 1 557 292 68 30 chr20 35269069 35269226 -36884656 - MLT1K LTR MaLR -31 557 385 1924 147 6 44 chr20 35269226 35269546 -36884336 - AluSx SINE Alu -4 308 1 557 292 68 30 chr20 35269546 35269652 -36884230 - MLT1K LTR MaLR -203 385 284 183 264 55 82 chr20 35269725 35269835 -36884047 - MER5A DNA MER1_type -6 183 77 * 465 189 220 8 chr20 35269742 35269874 -36884008 + MER5A DNA MER1_type 28 187 -2 315 267 145 17 chr20 35270776 35270948 -36882934 + MIR3 SINE MIR 14 207 -1 2486 54 41 0 chr20 35271041 35271335 -36882547 + AluY SINE Alu 1 306 -5 2490 95 0 3 chr20 35272382 35272688 -36881194 + AluSx SINE Alu 1 305 -7 2296 74 7 29 chr20 35272688 35272997 -36880885 + AluY SINE Alu 1 302 -9 1786 102 140 19 chr20 35273397 35273661 -36880221 + AluSx SINE Alu 1 296 -16 2060 103 3 67 chr20 35275231 35275543 -36878339 - AluSx SINE Alu -19 293 2 1337 163 41 13 chr20 35275593 35276090 -36877792 + MLT1F1 LTR MaLR 11 542 0 541 236 14 35 chr20 35276119 35276267 -36877615 - MIR3 SINE MIR -35 173 28 182 273 20 81 chr20 35276477 35276576 -36877306 - MIR SINE MIR -46 216 124 246 299 168 22 chr20 35276797 35276934 -36876948 + MIR SINE MIR 30 186 -76 2289 96 3 7 chr20 35277724 35278017 -36875865 - AluSx SINE Alu -20 292 1 1861 140 0 8 chr20 35278138 35278402 -36875480 + AluSx SINE Alu 45 306 -6 349 254 61 18 chr20 35278402 35278516 -36875366 + Charlie8 DNA MER1_type 84 202 -2215 518 238 94 19 chr20 35278614 35278774 -36875108 - MIR SINE MIR -77 185 14 2410 82 0 19 chr20 35279373 35279688 -36874194 + AluY SINE Alu 1 309 -2 629 293 60 5 chr20 35279806 35280021 -36873861 - MIR SINE MIR -31 231 5 316 235 0 92 chr20 35280062 35280106 -36873776 - MER5B DNA MER1_type -22 156 124 2481 71 3 7 chr20 35280106 35280415 -36873467 + AluSp SINE Alu 1 308 -5 316 235 0 92 chr20 35280415 35280468 -36873414 - MER5B DNA MER1_type -54 124 68 2412 98 0 3 chr20 35280942 35281247 -36872635 - AluSx SINE Alu -8 304 1 1716 160 59 14 chr20 35281955 35282242 -36871640 + AluJo SINE Alu 1 300 -12 266 306 52 0 chr20 35282250 35282384 -36871498 - L1ME LINE L1 -439 5682 5542 2364 89 0 37 chr20 35282547 35282726 -36871156 - AluSx SINE Alu 0 312 128 2328 109 0 3 chr20 35282726 35283028 -36870854 - AluSg SINE Alu -9 301 1 2399 95 0 7 chr20 35283028 35283333 -36870549 - AluSq SINE Alu -10 303 1 2364 89 0 37 chr20 35283333 35283476 -36870406 - AluSx SINE Alu -182 130 1 241 276 50 55 chr20 35283528 35283709 -36870173 + L2 LINE L2 2565 2744 -570 346 261 75 44 chr20 35285355 35285681 -36868201 + L2 LINE L2 2643 2984 -329 731 162 28 7 chr20 35286198 35286340 -36867542 + MIR SINE MIR 13 157 -105 298 350 32 0 chr20 35286613 35286736 -36867146 - MIR SINE MIR -6 256 130 551 136 0 0 chr20 35286953 35287041 -36866841 + AluSg/x SINE Alu 217 304 -5 1288 266 94 46 chr20 35287878 35288461 -36865421 - L2 LINE L2 -582 2732 2122 301 274 29 0 chr20 35288554 35288656 -36865226 + MLT1K LTR MaLR 151 255 -333 388 287 77 46 chr20 35289424 35289619 -36864263 + L2 LINE L2 547 747 -2567 338 311 133 37 chr20 35290502 35290837 -36863045 + L2 LINE L2 770 1072 -2242 207 0 0 0 chr20 35290837 35290860 -36863022 + (TTAA)n Simple_repeat Simple_repeat 2 24 0 2114 107 0 21 chr20 35290860 35291151 -36862731 - AluSg SINE Alu -25 285 1 338 311 133 37 chr20 35291151 35291413 -36862469 + L2 LINE L2 1071 1520 -1794 2440 88 0 0 chr20 35291416 35291711 -36862171 + AluSx SINE Alu 5 299 -13 7441 71 4 24 chr20 35291725 35292753 -36861129 + LTR13 LTR ERVK 1 1007 0 1437 246 166 51 chr20 35292811 35293457 -36860425 + L2 LINE L2 1867 2668 -646 2249 112 7 3 chr20 35293457 35293762 -36860120 + AluSx SINE Alu 1 306 -6 1437 246 166 51 chr20 35293762 35294110 -36859772 + L2 LINE L2 2668 2975 -339 234 186 0 0 chr20 35294111 35294154 -36859728 + L2 LINE L2 3251 3293 -20 220 261 257 22 chr20 35294231 35294453 -36859429 - L2 LINE L2 -527 2787 2514 221 280 93 37 chr20 35294642 35294749 -36859133 - MIR3 SINE MIR -48 160 48 226 229 0 0 chr20 35295041 35295089 -36858793 + MIR SINE MIR 106 153 -109 215 260 208 0 chr20 35295277 35295354 -36858528 + MIR SINE MIR 58 150 -112 2218 131 0 0 chr20 35295550 35295856 -36858026 - AluSx SINE Alu -6 306 1 384 262 205 19 chr20 35295950 35296160 -36857722 + MIR SINE MIR 10 258 -4 21 36 0 0 chr20 35296556 35296584 -36857298 + GC_rich Low_complexity Low_complexity 1 28 0 321 185 23 0 chr20 35297178 35297257 -36856625 + MIR SINE MIR 100 181 -63 1990 118 3 20 chr20 35297267 35297571 -36856311 + AluJo SINE Alu 1 299 -13 234 261 84 8 chr20 35297690 35297809 -36856073 - L1ME3A LINE L1 -209 5961 5834 966 167 29 29 chr20 35297832 35298042 -36855840 + MER2 DNA MER2_type 1 210 -135 1205 99 19 0 chr20 35298081 35298242 -36855640 - AluSg/x SINE Alu -15 297 134 2407 83 3 0 chr20 35298242 35298543 -36855339 - AluSp SINE Alu -11 302 1 942 244 99 78 chr20 35298553 35298590 -36855292 + Charlie7 DNA MER1_type 98 133 -2479 2322 67 3 32 chr20 35298590 35298905 -36854977 + AluY SINE Alu 1 306 -5 942 244 99 78 chr20 35298905 35299356 -36854526 + Charlie7 DNA MER1_type 133 602 -2010 2220 123 10 0 chr20 35299356 35299664 -36854218 + AluSx SINE Alu 1 311 -1 942 244 99 78 chr20 35299664 35299749 -36854133 + Charlie7 DNA MER1_type 602 684 -1928 2197 126 0 3 chr20 35299923 35300224 -36853658 - AluSx SINE Alu -12 300 1 2615 153 22 36 chr20 35300228 35300663 -36853219 + L1MD1 LINE L1 5748 6188 -54 1499 144 121 12 chr20 35300663 35300919 -36852963 - AluSx SINE Alu -2 310 27 * 2313 110 10 0 chr20 35300917 35301227 -36852655 - AluSp SINE Alu 0 313 1 2615 153 22 36 chr20 35301227 35301288 -36852594 + L1MD1 LINE L1 6496 6236 -6 2759 127 11 5 chr20 35301354 35301803 -36852079 - L1PA13 LINE L1 -5 6158 5707 2089 139 3 0 chr20 35301824 35302118 -36851764 + AluSx SINE Alu 1 295 -17 2356 97 0 0 chr20 35302211 35302509 -36851373 - AluSx SINE Alu -14 298 1 2382 115 0 0 chr20 35302511 35302815 -36851067 - AluSx SINE Alu -8 304 1 372 235 87 0 chr20 35302815 35302930 -36850952 - L1M4 LINE L1 -3620 2526 2402 547 205 55 47 chr20 35302943 35303070 -36850812 + FLAM_A SINE Alu 1 128 -5 1928 106 73 4 chr20 35303073 35303348 -36850534 + AluSq SINE Alu 1 294 -19 528 130 9 19 chr20 35303409 35303517 -36850365 + (GGAA)n Simple_repeat Simple_repeat 2 108 0 317 145 0 16 chr20 35303533 35303595 -36850287 - L1MDa LINE L1 -5884 656 596 2306 88 0 24 chr20 35303617 35303914 -36849968 - AluSg SINE Alu -20 290 1 865 249 170 38 chr20 35303937 35304302 -36849580 + L1MC4a LINE L1 5453 5865 -1943 301 70 18 105 chr20 35304338 35304395 -36849487 + Alu SINE Alu 238 289 -13 2158 103 21 0 chr20 35304399 35304716 -36849166 + AluSx SINE Alu 1 323 0 320 293 61 18 chr20 35304717 35304881 -36849001 + L1MC4a LINE L1 5862 6032 -1776 369 260 91 32 chr20 35305653 35305807 -36848075 + L2 LINE L2 3151 3313 0 182 245 157 49 chr20 35306477 35306579 -36847303 - MIR SINE MIR -80 182 70 1632 177 10 30 chr20 35306632 35306932 -36846950 - AluJo SINE Alu -7 305 12 375 200 328 0 chr20 35307073 35307198 -36846684 - MIR SINE MIR -90 172 7 252 197 99 14 chr20 35307255 35307326 -36846556 - L2 LINE L2 -50 3263 3187 350 300 6 22 chr20 35307343 35307447 -36846435 + (CATA)n Simple_repeat Simple_repeat 2 103 -75 2027 108 7 14 chr20 35307447 35307734 -36846148 + AluSx SINE Alu 1 285 -27 350 300 6 22 chr20 35307734 35307809 -36846073 + (CATA)n Simple_repeat Simple_repeat 103 178 0 912 129 0 0 chr20 35307875 35307999 -36845883 - FLAM_C SINE Alu -19 124 1 228 308 165 59 chr20 35308109 35308430 -36845452 - L2 LINE L2 -1 3271 2917 2268 118 0 0 chr20 35308442 35308747 -36845135 + AluSx SINE Alu 1 305 -7 330 314 58 35 chr20 35308747 35308913 -36844969 + Charlie8 DNA MER1_type 102 271 -2146 1762 207 57 39 chr20 35309301 35309760 -36844122 + MLT1C LTR MaLR 1 467 0 195 187 121 88 chr20 35310530 35310621 -36843261 - MIR SINE MIR -65 143 50 1062 217 118 69 chr20 35310804 35310856 -36843026 - MLT1G1 LTR MaLR -5 590 542 2015 114 44 0 chr20 35310856 35311159 -36842723 - AluSg1 SINE Alu 0 315 1 1062 217 118 69 chr20 35311159 35311570 -36842312 - MLT1G1 LTR MaLR -53 542 102 2353 143 23 30 chr20 35311573 35311642 -36842240 - MSTB1 LTR MaLR 0 432 364 2071 210 38 73 chr20 35311642 35312276 -36841606 - LTR9 LTR ERV1 0 612 1 2353 143 23 30 chr20 35312276 35312641 -36841241 - MSTB1 LTR MaLR -68 364 1 1402 211 34 34 chr20 35312694 35312992 -36840890 + AluJb SINE Alu 1 298 -14 2158 107 0 43 chr20 35312996 35313132 -36840750 + AluSx SINE Alu 10 150 -162 2477 74 0 0 chr20 35313132 35313429 -36840453 + AluY SINE Alu 1 297 -14 2158 107 0 43 chr20 35313429 35313591 -36840291 + AluSx SINE Alu 150 295 -17 488 212 176 30 chr20 35313593 35313758 -36840124 - MER4C LTR ERV1 0 465 277 1912 84 69 158 chr20 35313778 35314240 -36839642 - MER4A LTR ERV1 -243 421 1 284 193 53 0 chr20 35314240 35314297 -36839585 - MLT1G1 LTR MaLR -535 60 1 468 294 200 0 chr20 35314302 35314462 -36839420 + MIR SINE MIR 19 210 -52 3849 93 16 40 chr20 35314757 35314858 -36839024 + MER41A LTR ERV1 1 103 -451 2264 102 3 10 chr20 35314858 35315163 -36838719 - AluSq SINE Alu -3 310 8 3849 93 16 40 chr20 35315163 35315629 -36838253 + MER41A LTR ERV1 103 554 0 1827 143 79 54 chr20 35316176 35316465 -36837417 + MER57A LTR ERV1 3 306 -97 3615 139 48 11 chr20 35316465 35316954 -36836928 + MER41B LTR ERV1 3 520 -115 2202 115 3 6 chr20 35316954 35317266 -36836616 - AluY SINE Alu 0 311 1 3615 139 48 11 chr20 35317266 35317387 -36836495 + MER41B LTR ERV1 520 635 0 1827 143 79 54 chr20 35317387 35317488 -36836394 + MER57A LTR ERV1 306 403 0 249 234 255 11 chr20 35317488 35317582 -36836300 - L2 LINE L2 -32 3281 3165 193 232 21 0 chr20 35317643 35317738 -36836144 + (TA)n Simple_repeat Simple_repeat 2 98 0 1899 156 7 3 chr20 35317747 35318036 -36835846 + AluJo SINE Alu 10 299 -13 602 306 142 4 chr20 35318047 35318374 -36835508 - L2 LINE L2 -150 3163 2794 245 214 27 143 chr20 35318414 35318526 -36835356 + L1M LINE L1 5274 5372 -792 1097 165 14 28 chr20 35318617 35318829 -36835053 + AluJb SINE Alu 104 312 0 2316 120 0 0 chr20 35318833 35319142 -36834740 - AluSx SINE Alu -3 309 1 235 302 0 0 chr20 35319320 35319383 -36834499 + L2 LINE L2 755 817 -2497 684 283 52 28 chr20 35319395 35319685 -36834197 - MLT1L LTR MaLR -6 609 313 2491 78 7 0 chr20 35319745 35320053 -36833829 + AluY SINE Alu 1 310 -1 2419 98 3 0 chr20 35320135 35320441 -36833441 + AluSx SINE Alu 1 307 -5 281 231 0 0 chr20 35320479 35320531 -36833351 - MLT1J LTR MaLR -103 408 357 873 148 7 14 chr20 35320540 35320682 -36833200 + AluJ SINE Alu 2 142 -170 1927 149 0 49 chr20 35320682 35320829 -36833053 + AluSx SINE Alu 1 127 -185 7265 47 8 3 chr20 35320829 35322299 -36831583 + L1PA6 LINE L1 4674 6148 -6 1927 149 0 49 chr20 35322299 35322459 -36831423 + AluSx SINE Alu 127 293 -19 810 166 22 7 chr20 35322920 35323059 -36830823 + AluJ SINE Alu 120 260 -52 267 291 163 0 chr20 35323259 35323400 -36830482 - MIR SINE MIR -2 260 97 1530 163 80 28 chr20 35323425 35323714 -36830168 + AluJo SINE Alu 1 304 -8 704 95 0 0 chr20 35323827 35323932 -36829950 - AluSg/x SINE Alu -1 311 207 688 185 58 29 chr20 35324023 35324188 -36829694 + MER21B LTR ERV1 127 299 -564 2499 85 0 0 chr20 35324188 35324493 -36829389 - AluSg SINE Alu -5 305 1 2235 119 0 0 chr20 35324563 35324857 -36829025 + AluSx SINE Alu 1 294 -18 669 212 0 36 chr20 35324897 35325034 -36828848 + FLAM_C SINE Alu 2 133 0 1724 167 3 36 chr20 35325041 35325347 -36828535 + AluJb SINE Alu 1 296 -16 21 0 0 0 chr20 35325347 35325368 -36828514 + AT_rich Low_complexity Low_complexity 1 21 0 2192 186 53 16 chr20 35325518 35326091 -36827791 + LTR27 LTR ERV1 2 661 -141 1606 192 21 39 chr20 35326072 35326410 -36827472 + LTR28 LTR ERV1 689 1020 0 * 1841 149 9 44 chr20 35326468 35326784 -36827098 + AluJb SINE Alu 1 305 -7 626 237 75 27 chr20 35326823 35327009 -36826873 + MIR SINE MIR 60 254 -8 2300 85 7 0 chr20 35327076 35327380 -36826502 + AluSp SINE Alu 2 307 0 516 206 100 0 chr20 35327781 35327825 -36826057 - MER104 DNA MER2_type -1721 177 139 2246 88 3 26 chr20 35327825 35328131 -36825751 - AluSg SINE Alu -11 299 1 516 206 100 0 chr20 35328131 35328246 -36825636 - MER104 DNA MER2_type -1759 139 2 501 281 38 19 chr20 35328741 35328901 -36824981 - MIR3 SINE MIR -4 204 42 2365 103 3 0 chr20 35328996 35329298 -36824584 + AluSx SINE Alu 1 303 -9 539 261 68 68 chr20 35329476 35329545 -36824337 + MIR SINE MIR 43 111 -151 1656 209 123 84 chr20 35329545 35329656 -36824226 + MLT1F LTR MaLR 2 107 -435 1523 166 59 45 chr20 35329656 35329946 -36823936 + AluJo SINE Alu 1 294 -18 2399 101 0 0 chr20 35329947 35330254 -36823628 + AluSg SINE Alu 1 307 -3 1656 209 123 84 chr20 35330254 35330661 -36823221 + MLT1F LTR MaLR 106 542 0 539 261 68 68 chr20 35330661 35330760 -36823122 + MIR SINE MIR 111 214 -48 2260 132 0 0 chr20 35330760 35331070 -36822812 + AluJb SINE Alu 1 310 -2 539 261 68 68 chr20 35331070 35331107 -36822775 + MIR SINE MIR 213 249 -13 370 303 40 53 chr20 35331527 35331549 -36822333 + MIR SINE MIR 51 72 -190 1692 167 30 20 chr20 35331549 35331848 -36822034 + AluSx SINE Alu 1 302 -10 370 303 40 53 chr20 35331848 35331977 -36821905 + MIR SINE MIR 72 200 -62 2261 120 0 0 chr20 35332149 35332448 -36821434 - AluSx SINE Alu -13 299 1 2141 131 0 13 chr20 35332461 35332775 -36821107 - AluSx SINE Alu -1 311 2 2516 73 3 0 chr20 35332799 35333100 -36820782 - AluSp SINE Alu -11 302 1 665 172 0 16 chr20 35333216 35333232 -36820650 - FRAM SINE Alu -136 40 25 2350 80 30 0 chr20 35333232 35333534 -36820348 - AluY SINE Alu 0 311 1 665 172 0 16 chr20 35333534 35333639 -36820243 - FRAM SINE Alu -151 25 1 464 117 0 13 chr20 35333639 35333711 -36820171 + Alu SINE Alu 237 307 -3 644 236 59 32 chr20 35333727 35333947 -36819935 + LTR67 LTR ERVL 332 557 0 27 49 0 0 chr20 35333982 35334023 -36819859 + AT_rich Low_complexity Low_complexity 1 41 0 589 232 38 108 chr20 35334190 35334309 -36819573 - L1ME3 LINE L1 -1 6161 6035 2160 134 0 3 chr20 35334309 35334614 -36819268 + AluSq SINE Alu 2 305 -8 589 232 38 108 chr20 35334614 35334721 -36819161 - L1ME3 LINE L1 -127 6035 5922 2155 120 6 25 chr20 35334721 35335037 -36818845 - AluSx SINE Alu -2 310 1 589 232 38 108 chr20 35335037 35335072 -36818810 - L1ME3 LINE L1 -240 5922 5886 1688 165 3 44 chr20 35335072 35335388 -36818494 + AluJo SINE Alu 1 303 -9 589 232 38 108 chr20 35335388 35335494 -36818388 - L1ME3 LINE L1 -276 5886 5818 2255 102 0 28 chr20 35335496 35335818 -36818064 - AluSq SINE Alu 0 313 1 2110 110 0 0 chr20 35335848 35336166 -36817716 - AluSx SINE Alu 0 328 11 1759 140 19 48 chr20 35336171 35336485 -36817397 - AluJo SINE Alu -7 305 1 2393 66 0 47 chr20 35336486 35336803 -36817079 - AluY SINE Alu -9 302 1 2077 144 0 0 chr20 35336856 35337155 -36816727 - AluSg SINE Alu -11 299 1 370 210 0 0 chr20 35337155 35337236 -36816646 - AluJo/FLAM SINE Alu -170 132 52 1607 159 17 23 chr20 35337261 35337562 -36816320 + MER61C LTR ERV1 136 434 0 247 245 0 0 chr20 35337562 35337611 -36816271 - Alu SINE Alu -116 187 139 445 279 76 5 chr20 35337620 35337817 -36816065 - L1MC4a LINE L1 -1979 5829 5619 300 53 0 0 chr20 35337831 35337869 -36816013 + (TTTTC)n Simple_repeat Simple_repeat 3 40 0 1972 160 0 3 chr20 35337909 35338209 -36815673 - AluJo SINE Alu -13 299 1 1984 90 21 14 chr20 35338232 35338543 -36815339 - AluSg SINE Alu 0 313 1 414 170 20 20 chr20 35338549 35338649 -36815233 - L1MB7 LINE L1 -11 6173 6074 2278 203 68 77 chr20 35338687 35339214 -36814668 - MER21B LTR ERV1 -52 811 290 2059 143 0 3 chr20 35339214 35339507 -36814375 + AluSx SINE Alu 1 292 -20 2278 203 68 77 chr20 35339507 35339670 -36814212 - MER21B LTR ERV1 -573 290 127 2017 114 0 60 chr20 35339702 35340019 -36813863 + AluSc SINE Alu 2 299 -10 2264 109 0 3 chr20 35340146 35340439 -36813443 - AluSg SINE Alu -18 292 1 965 134 8 0 chr20 35340508 35340642 -36813240 + AluSq/x SINE Alu 1 135 -178 2219 113 7 0 chr20 35340642 35340934 -36812948 + AluSg SINE Alu 2 295 -15 2249 84 14 0 chr20 35340936 35341222 -36812660 + AluSg SINE Alu 1 290 -20 559 192 16 8 chr20 35341421 35341546 -36812336 - L1M4 LINE L1 -960 5186 5061 1822 191 3 0 chr20 35341546 35341855 -36812027 - AluJo SINE Alu -2 310 1 275 228 98 82 chr20 35341862 35342046 -36811836 - L1MC4a LINE L1 -513 5608 5422 394 197 149 64 chr20 35342180 35342264 -36811618 + L1MC5 LINE L1 7724 7799 -162 2122 116 14 0 chr20 35342264 35342557 -36811325 - AluSx SINE Alu -15 297 1 702 208 0 8 chr20 35342557 35342682 -36811200 - AluJo/FLAM SINE Alu -178 124 1 394 197 149 64 chr20 35342682 35342784 -36811098 + L1MC5 LINE L1 7798 7927 -34 872 133 7 22 chr20 35342792 35342927 -36810955 + AluJo/FLAM SINE Alu 1 133 -169 2292 113 0 3 chr20 35342930 35343230 -36810652 - AluSq SINE Alu -13 300 2 369 333 57 0 chr20 35343319 35343442 -36810440 + MIR SINE MIR 12 141 -121 1911 239 63 31 chr20 35343455 35344040 -36809842 - LTR31 LTR ERV1 -15 604 1 2680 58 0 0 chr20 35344063 35344374 -36809508 - AluY SINE Alu 0 311 1 2259 114 3 0 chr20 35344724 35345014 -36808868 - AluSg SINE Alu -17 293 3 2302 117 16 0 chr20 35345019 35345326 -36808556 - AluSx SINE Alu 0 312 1 452 305 112 16 chr20 35345445 35345632 -36808250 + MIR SINE MIR 47 251 -11 2352 88 3 0 chr20 35345769 35346063 -36807819 + AluSp SINE Alu 3 297 -16 234 250 200 0 chr20 35346159 35346239 -36807643 - MIR SINE MIR -62 146 51 2257 118 0 0 chr20 35346391 35346687 -36807195 - AluSx SINE Alu -16 296 1 802 198 116 34 chr20 35346687 35346894 -36806988 - AluJo SINE Alu -2 310 87 416 257 7 19 chr20 35346935 35347085 -36806797 - L1MC4 LINE L1 -4 8038 7782 2060 140 0 0 chr20 35347101 35347393 -36806489 - AluSx SINE Alu -20 292 1 915 201 0 33 chr20 35347395 35347555 -36806327 - AluJb SINE Alu -16 296 141 2078 93 93 0 chr20 35347555 35347834 -36806048 - AluSg SINE Alu -5 305 1 915 201 0 33 chr20 35347834 35347857 -36806025 - AluJb SINE Alu -171 141 119 2206 116 0 7 chr20 35347953 35348255 -36805627 - AluSx SINE Alu -12 300 1 2031 126 0 33 chr20 35348263 35348591 -36805291 - AluSx SINE Alu 0 312 1 1034 145 11 0 chr20 35348685 35348871 -36805011 - MER53 DNA DNA 0 189 2 214 206 73 0 chr20 35349526 35349594 -36804288 - MIR SINE MIR -77 185 113 678 177 45 91 chr20 35349782 35349858 -36804024 + MER5A DNA MER1_type 1 79 -110 2421 77 0 3 chr20 35349858 35350156 -36803726 + AluSq SINE Alu 6 302 -11 678 177 45 91 chr20 35350156 35350277 -36803605 + MER5A DNA MER1_type 79 189 0 2655 61 0 3 chr20 35350301 35350613 -36803269 - AluY SINE Alu 0 311 1 667 202 0 0 chr20 35350668 35350787 -36803095 - FLAM_C SINE Alu -14 119 1 1508 97 0 10 chr20 35350813 35351008 -36802874 + AluSq SINE Alu 1 193 -120 476 108 0 0 chr20 35351008 35351073 -36802809 + AluJ/FRAM SINE Alu 230 294 -18 674 154 89 0 chr20 35351083 35351206 -36802676 + FRAM SINE Alu 42 175 -1 966 222 41 33 chr20 35351223 35351319 -36802563 - L1ME3A LINE L1 -4 6166 6072 3926 107 34 54 chr20 35351319 35351423 -36802459 + MER41B LTR ERV1 1 106 -529 2073 109 4 0 chr20 35351423 35351697 -36802185 - AluSg SINE Alu -20 290 16 3926 107 34 54 chr20 35351697 35352097 -36801785 + MER41B LTR ERV1 106 512 -123 2124 130 0 9 chr20 35352097 35352412 -36801470 - AluSx SINE Alu 0 312 1 2288 92 0 35 chr20 35352420 35352737 -36801145 - AluSg SINE Alu -4 306 1 3926 107 34 54 chr20 35352737 35352765 -36801117 + MER41B LTR ERV1 519 546 -89 2250 119 0 0 chr20 35352765 35353067 -36800815 + AluSq SINE Alu 1 302 -11 3926 107 34 54 chr20 35353067 35353171 -36800711 + MER41B LTR ERV1 546 635 0 966 222 41 33 chr20 35353171 35353317 -36800565 - L1ME3A LINE L1 -98 6072 5922 335 272 88 24 chr20 35353335 35353460 -36800422 + MIR SINE MIR 22 154 -108 2269 96 3 0 chr20 35353469 35353762 -36800120 + AluSg SINE Alu 1 294 -16 626 229 8 0 chr20 35353762 35353884 -36799998 + MER5A DNA MER1_type 67 189 0 223 196 0 39 chr20 35353890 35353941 -36799941 + MER5A DNA MER1_type 103 151 -38 1726 127 11 45 chr20 35354020 35354188 -36799694 - AluSx SINE Alu -16 296 139 2338 83 3 0 chr20 35354188 35354478 -36799404 - AluSg SINE Alu -19 291 1 1726 127 11 45 chr20 35354478 35354577 -36799305 - AluSx SINE Alu -173 139 38 1142 116 0 0 chr20 35354577 35354724 -36799158 - AluSq/x SINE Alu -166 147 1 1786 121 0 109 chr20 35354732 35354954 -36798928 - AluSx SINE Alu 0 302 128 1522 90 0 20 chr20 35354954 35355155 -36798727 + AluSg/x SINE Alu 109 305 -7 1786 121 0 109 chr20 35355155 35355271 -36798611 - AluSx SINE Alu -174 128 1 1427 145 13 4 chr20 35355272 35355506 -36798376 + AluJo SINE Alu 68 303 -9 271 220 35 11 chr20 35355670 35355821 -36798061 + MIR SINE MIR 16 218 -44 199 349 0 0 chr20 35355863 35355929 -36797953 - MIR SINE MIR -167 95 30 1575 135 6 132 chr20 35355997 35356353 -36797529 + AluJo SINE Alu 1 311 -1 803 196 42 53 chr20 35356399 35356588 -36797294 + MER5A DNA MER1_type 1 187 -2 34 0 0 0 chr20 35357269 35357303 -36796579 + GC_rich Low_complexity Low_complexity 1 34 0 2336 63 0 50 chr20 35358150 35358467 -36795415 + AluSg SINE Alu 1 301 -9 2080 125 0 3 chr20 35358477 35358774 -36795108 + AluJb SINE Alu 5 300 -12 2033 118 3 10 chr20 35358974 35359270 -36794612 - AluSg SINE Alu -16 294 1 336 281 144 13 chr20 35359313 35359466 -36794416 - MER5A DNA MER1_type 0 189 17 1308 186 84 14 chr20 35359806 35360081 -36793801 - AluJb SINE Alu -18 294 1 880 160 0 14 chr20 35360140 35360284 -36793598 + FLAM_C SINE Alu 1 142 -1 991 128 0 87 chr20 35360746 35360918 -36792964 - AluSg/x SINE Alu -25 287 131 182 319 0 0 chr20 35361010 35361057 -36792825 - L3 LINE CR1 -7 1570 1524 401 249 119 40 chr20 35361059 35361236 -36792646 + MER117 DNA MER1_type 6 196 -1 2309 90 3 10 chr20 35361544 35361845 -36792037 + AluSc SINE Alu 1 299 -10 202 339 0 0 chr20 35361987 35362049 -36791833 + L2 LINE L2 3201 3262 -10 2225 105 3 16 chr20 35362603 35362908 -36790974 + AluSg SINE Alu 1 301 -9 1890 159 7 7 chr20 35363377 35363678 -36790204 + AluJb SINE Alu 1 301 -11 540 292 14 25 chr20 35363678 35363902 -36789980 + MIR SINE MIR 3 219 -43 2154 139 0 13 chr20 35363933 35364242 -36789640 + AluSx SINE Alu 1 305 -7 2653 47 0 0 chr20 35364442 35364742 -36789140 + AluY SINE Alu 1 300 -11 450 91 0 0 chr20 35364762 35364828 -36789054 + L1M2 LINE L1 5602 5667 -645 2047 110 29 26 chr20 35364829 35365139 -36788743 - AluSx SINE Alu -1 311 1 36 53 0 0 chr20 35365207 35365264 -36788618 + AT_rich Low_complexity Low_complexity 1 57 0 365 285 48 30 chr20 35365331 35365496 -36788386 + MIR3 SINE MIR 40 207 -1 2457 56 3 26 chr20 35365580 35365884 -36787998 + AluY SINE Alu 1 297 -14 2389 88 0 0 chr20 35365940 35366235 -36787647 - AluY SINE Alu -16 295 1 2041 145 7 0 chr20 35366531 35366828 -36787054 - AluSq SINE Alu -14 299 1 2075 115 7 0 chr20 35366835 35367113 -36786769 - AluSx SINE Alu -14 298 19 1576 110 5 5 chr20 35367437 35367656 -36786226 - AluSc SINE Alu -8 301 83 22 0 0 0 chr20 35367658 35367680 -36786202 + AT_rich Low_complexity Low_complexity 1 22 0 460 307 54 0 chr20 35367848 35368014 -36785868 + MIR SINE MIR 5 179 -83 253 333 44 26 chr20 35368155 35368269 -36785613 - MER102a DNA MER1_type -6 324 209 2376 81 0 23 chr20 35368288 35368595 -36785287 - AluSq SINE Alu -12 301 2 2367 94 3 0 chr20 35368599 35368896 -36784986 - AluSp SINE Alu -15 298 1 21 0 0 0 chr20 35368896 35368917 -36784965 + AT_rich Low_complexity Low_complexity 1 21 0 465 152 0 38 chr20 35368928 35369008 -36784874 + L1MA8 LINE L1 6165 6242 -49 779 154 8 0 chr20 35369008 35369125 -36784757 + FLAM_C SINE Alu 1 118 -15 465 152 0 38 chr20 35369125 35369149 -36784733 + L1MA8 LINE L1 6242 6265 -26 21 0 0 0 chr20 35369184 35369205 -36784677 + AT_rich Low_complexity Low_complexity 1 21 0 315 0 0 0 chr20 35369252 35369287 -36784595 + (T)n Simple_repeat Simple_repeat 1 35 0 742 161 0 0 chr20 35369288 35369400 -36784482 + FLAM_C SINE Alu 3 114 -29 508 262 45 50 chr20 35369484 35369705 -36784177 - MER102a DNA MER1_type -110 220 1 823 127 59 149 chr20 35369784 35370036 -36783846 + AluJb SINE Alu 84 315 0 2005 133 3 3 chr20 35370647 35370941 -36782941 + AluSx SINE Alu 1 294 -18 1957 145 0 23 chr20 35371137 35371441 -36782441 + AluJb SINE Alu 1 297 -15 2247 88 6 25 chr20 35371744 35372062 -36781820 + AluSx SINE Alu 1 312 0 437 204 58 19 chr20 35372421 35372524 -36781358 - U6 snRNA snRNA 0 107 1 272 254 93 25 chr20 35372671 35372789 -36781093 - HAL1 LINE L1 -2364 143 18 2003 139 17 65 chr20 35372867 35373150 -36780732 - L1MB4 LINE L1 -1 6179 5884 2421 76 0 10 chr20 35373150 35373452 -36780430 - AluY SINE Alu -12 299 1 1940 94 91 4 chr20 35373462 35373727 -36780155 - AluSc SINE Alu -21 288 1 2003 139 17 65 chr20 35373727 35373848 -36780034 - L1MB4 LINE L1 -305 5875 5784 688 167 51 5 chr20 35374001 35374165 -36779717 - L1MB4 LINE L1 -827 5319 5175 727 131 22 51 chr20 35374168 35374305 -36779577 - FLAM_C SINE Alu 0 133 1 2026 149 0 7 chr20 35374344 35374640 -36779242 - AluSx SINE Alu -15 297 4 817 127 76 70 chr20 35374676 35374834 -36779048 + AluJo SINE Alu 3 161 -151 * 914 136 117 7 chr20 35374833 35374987 -36778895 - AluSc SINE Alu -7 302 132 2292 89 0 3 chr20 35374987 35375280 -36778602 - AluSg SINE Alu -17 293 2 869 160 0 14 chr20 35375293 35375437 -36778445 + AluJo SINE Alu 159 300 -12 2211 117 3 7 chr20 35375963 35376263 -36777619 - AluSx SINE Alu -13 299 1 2119 128 0 0 chr20 35376268 35376597 -36777285 - AluSg SINE Alu 0 310 1 1620 176 0 36 chr20 35376598 35376900 -36776982 - AluJo SINE Alu -16 296 6 2400 85 3 0 chr20 35376918 35377212 -36776670 - AluSp SINE Alu -9 304 10 744 167 0 16 chr20 35377248 35377374 -36776508 - AluJb SINE Alu -178 134 11 2121 131 3 10 chr20 35377389 35377701 -36776181 - AluSp SINE Alu -3 310 1 180 0 0 0 chr20 35377703 35377723 -36776159 + (T)n Simple_repeat Simple_repeat 1 20 0 726 41 0 31 chr20 35377724 35377821 -36776061 - HY3 scRNA scRNA -7 94 1 2269 109 0 0 chr20 35377832 35378134 -36775748 - AluSg1 SINE Alu -7 302 1 2435 73 0 7 chr20 35378214 35378517 -36775365 - AluY SINE Alu -10 301 1 1850 145 0 55 chr20 35378576 35378745 -36775137 - AluSx SINE Alu -18 294 148 288 0 0 0 chr20 35378745 35378777 -36775105 + (TG)n Simple_repeat Simple_repeat 1 32 0 1850 145 0 55 chr20 35378777 35378918 -36774964 - AluSx SINE Alu -164 148 1 844 178 47 24 chr20 35379653 35379846 -36774036 - AluSg/x SINE Alu 0 309 113 2112 117 10 10 chr20 35380576 35380875 -36773007 + AluSx SINE Alu 1 299 -13 1594 145 59 35 chr20 35380900 35381190 -36772692 + AluJo SINE Alu 1 297 -15 2222 121 0 3 chr20 35381260 35381558 -36772324 - AluSc SINE Alu -12 297 1 1276 189 0 5 chr20 35381656 35381873 -36772009 - AluJb SINE Alu -15 297 82 195 42 0 0 chr20 35381887 35381911 -36771971 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 1091 192 0 10 chr20 35381930 35382138 -36771744 - AluJb SINE Alu -2 310 105 728 245 55 0 chr20 35382549 35382712 -36771170 + MER8 DNA MER2_type 1 172 -67 683 174 0 84 chr20 35382717 35382872 -36771010 - FLAM_C SINE Alu 0 143 2 437 198 0 12 chr20 35382873 35382954 -36770928 + MER8 DNA MER2_type 160 239 0 412 240 110 0 chr20 35383121 35383221 -36770661 - LTR47A LTR ERVL -65 387 277 1961 124 4 0 chr20 35383427 35383694 -36770188 + AluSx SINE Alu 34 301 -11 373 310 63 7 chr20 35383819 35383961 -36769921 - MIR SINE MIR -112 150 1 2314 118 3 0 chr20 35383999 35384305 -36769577 - AluSx SINE Alu -5 307 1 2178 103 31 3 chr20 35384316 35384608 -36769274 - AluSq SINE Alu -13 300 1 21 57 0 0 chr20 35385446 35385481 -36768401 + AT_rich Low_complexity Low_complexity 1 35 0 603 168 0 0 chr20 35386255 35386362 -36767520 - AluJo/FRAM SINE Alu 0 312 206 460 239 0 58 chr20 35386365 35386503 -36767379 + FLAM_A SINE Alu 4 133 0 678 185 39 56 chr20 35386568 35386746 -36767136 + LTR48B LTR ERV1 467 641 -3 1079 169 11 6 chr20 35386784 35386962 -36766920 + AluJo SINE Alu 1 179 -133 823 298 49 3 chr20 35386962 35387247 -36766635 - L2 LINE L2 -1119 2195 1898 1780 145 78 0 chr20 35387505 35387788 -36766094 + AluSx SINE Alu 1 305 -7 250 196 0 0 chr20 35387808 35387859 -36766023 + L2 LINE L2 3263 3313 0 315 137 0 0 chr20 35387974 35388025 -36765857 - L1MB8 LINE L1 -4 6174 6124 711 186 28 14 chr20 35388056 35388201 -36765681 - AluJo SINE Alu -128 184 38 1936 187 78 58 chr20 35388201 35388505 -36765377 - LTR48B LTR ERV1 -64 580 258 2436 87 0 3 chr20 35388505 35388804 -36765078 + AluSx SINE Alu 1 298 -14 1936 187 78 58 chr20 35388804 35389066 -36764816 - LTR48B LTR ERV1 -386 258 3 3549 144 42 95 chr20 35389067 35389591 -36764291 - L1MB7 LINE L1 -82 6102 5551 2248 110 0 0 chr20 35389591 35389883 -36763999 - AluSx SINE Alu -14 298 7 3549 144 42 95 chr20 35389883 35390064 -36763818 - L1MB7 LINE L1 -633 5551 5445 900 165 6 37 chr20 35390064 35390228 -36763654 - FRAM SINE Alu -7 159 1 3549 144 42 95 chr20 35390228 35390341 -36763541 - L1MB7 LINE L1 -739 5445 5327 2308 99 13 0 chr20 35390573 35390876 -36763006 - AluSg1 SINE Alu -2 307 1 1918 163 0 0 chr20 35391623 35391918 -36761964 - AluJo SINE Alu -17 295 1 2347 90 10 0 chr20 35391953 35392253 -36761629 - AluSq SINE Alu -10 303 1 22 56 0 0 chr20 35392265 35392301 -36761581 + AT_rich Low_complexity Low_complexity 1 36 0 2306 103 10 0 chr20 35392666 35392976 -36760906 + AluSp SINE Alu 1 313 0 1934 110 4 4 chr20 35393114 35393368 -36760514 + AluSx SINE Alu 1 254 -58 1080 169 20 88 chr20 35393368 35393497 -36760385 - AluJb SINE Alu -69 243 138 2217 125 0 0 chr20 35393497 35393792 -36760090 - AluSc SINE Alu -14 295 1 1080 169 20 88 chr20 35393792 35393911 -36759971 - AluJb SINE Alu -174 138 12 663 92 20 0 chr20 35394196 35394294 -36759588 - AluSg/x SINE Alu -5 304 205 307 248 0 7 chr20 35394296 35394317 -36759565 - AluJo SINE Alu -167 135 115 2006 145 0 3 chr20 35394317 35394614 -36759268 - AluSx SINE Alu -16 296 1 307 248 0 7 chr20 35394614 35394672 -36759210 - AluJo SINE Alu -187 115 78 309 389 83 10 chr20 35397352 35397719 -36756163 - L2 LINE L2 -286 2986 2596 185 258 42 108 chr20 35397924 35397971 -36755911 + MIR SINE MIR 80 129 -133 2060 131 24 0 chr20 35397971 35398268 -36755614 - AluSq SINE Alu -9 304 1 185 258 42 108 chr20 35398268 35398340 -36755542 + MIR SINE MIR 129 191 -71 1854 160 0 26 chr20 35398407 35398720 -36755162 + AluJb SINE Alu 1 305 -7 2254 111 0 3 chr20 35398778 35399076 -36754806 + AluSq SINE Alu 1 297 -16 826 109 0 17 chr20 35399336 35399455 -36754427 - FLAM_C SINE Alu -2 141 25 1925 134 0 27 chr20 35399580 35399879 -36754003 - AluJb SINE Alu -15 297 7 2582 57 0 0 chr20 35400088 35400389 -36753493 - AluY SINE Alu -10 301 1 2185 100 0 7 chr20 35400835 35401124 -36752758 - AluSx SINE Alu -25 287 1 363 283 97 38 chr20 35401232 35401500 -36752382 + L2 LINE L2 2949 3303 -10 718 210 0 0 chr20 35401521 35401645 -36752237 - FLAM_A SINE Alu -9 124 1 1341 195 43 4 chr20 35401673 35401929 -36751953 - AluJo SINE Alu -46 266 1 233 306 0 6 chr20 35402419 35402523 -36751359 + T-rich Low_complexity Low_complexity 1 156 0 1126 164 0 11 chr20 35402746 35402929 -36750953 - AluJo SINE Alu -10 302 122 496 184 0 88 chr20 35402958 35403072 -36750810 - FLAM_A SINE Alu -15 127 24 307 310 126 16 chr20 35403072 35403327 -36750555 - L1ME4a LINE L1 -210 5911 5629 27 0 0 0 chr20 35403396 35403423 -36750459 + AT_rich Low_complexity Low_complexity 1 27 0 917 213 0 44 chr20 35403439 35403622 -36750260 + FAM SINE Alu 1 175 0 2179 115 6 22 chr20 35403641 35403955 -36749927 + AluSq SINE Alu 1 309 -4 518 238 0 57 chr20 35404117 35404239 -36749643 + FLAM_A SINE Alu 1 115 -18 2033 97 0 8 chr20 35404741 35405009 -36748873 - AluSx SINE Alu -46 266 1 506 272 44 0 chr20 35405578 35405714 -36748168 + MIR SINE MIR 53 194 -68 242 209 122 43 chr20 35406430 35406569 -36747313 - L1ME4a LINE L1 -11 6110 5961 829 253 0 6 chr20 35406582 35406740 -36747142 - FAM SINE Alu -18 157 1 920 178 6 18 chr20 35407556 35407719 -36746163 + AluJb SINE Alu 141 301 -11 2380 87 0 40 chr20 35408013 35408335 -36745547 - AluSp SINE Alu -4 309 1 1860 146 7 7 chr20 35408831 35409125 -36744757 + AluJo SINE Alu 1 294 -18 2135 94 0 0 chr20 35409398 35409673 -36744209 + AluSg SINE Alu 2 276 -34 2412 83 3 0 chr20 35409673 35409972 -36743910 + AluSp SINE Alu 1 301 -12 293 182 0 0 chr20 35409972 35410027 -36743855 - MER44D DNA MER2_type -184 425 371 381 150 83 0 chr20 35410081 35410141 -36743741 - MER44D DNA MER2_type -238 371 37 1342 95 0 0 chr20 35410467 35410636 -36743246 - AluSq SINE Alu -15 298 130 2209 94 3 7 chr20 35410656 35410953 -36742929 - AluSp SINE Alu -17 296 1 2266 100 0 0 chr20 35410956 35411255 -36742627 - AluSq SINE Alu -14 299 1 207 0 0 0 chr20 35411259 35411282 -36742600 + (T)n Simple_repeat Simple_repeat 1 23 0 1821 162 7 0 chr20 35411523 35411820 -36742062 - AluJo SINE Alu -13 299 1 2344 102 3 6 chr20 35412304 35412618 -36741264 - AluSp SINE Alu 0 313 1 1193 128 23 55 chr20 35413041 35413260 -36740622 - AluSg/x SINE Alu -16 296 85 683 105 0 0 chr20 35413260 35413355 -36740527 - AluY SINE Alu -62 249 155 563 312 71 4 chr20 35413356 35413609 -36740273 - L1ME4a LINE L1 -307 5863 5594 2370 192 66 25 chr20 35413646 35414173 -36739709 - L1MB5 LINE L1 -2 6172 5624 528 265 157 7 chr20 35414181 35414475 -36739407 - L1MEd LINE L1 -5221 898 561 988 204 17 0 chr20 35414662 35414834 -36739048 - FAM SINE Alu 0 175 1 234 0 0 0 chr20 35415150 35415176 -36738706 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1472 175 14 40 chr20 35415283 35415580 -36738302 + AluJb SINE Alu 3 291 -21 732 242 128 9 chr20 35415639 35415858 -36738024 - MIR SINE MIR 0 262 18 1432 228 29 39 chr20 35416144 35416355 -36737527 - L1MB7 LINE L1 -9 6175 5968 2258 112 0 0 chr20 35416355 35416650 -36737232 - AluSx SINE Alu -17 295 1 1432 228 29 39 chr20 35416650 35416850 -36737032 - L1MB7 LINE L1 -216 5968 5768 2156 115 3 3 chr20 35417162 35417458 -36736424 - AluSq SINE Alu -17 296 1 4048 183 28 53 chr20 35418554 35419548 -36734334 + LTR5 LTR ERVK 1 969 0 283 204 143 10 chr20 35419878 35419976 -36733906 + L1MC5 LINE L1 7787 7897 -64 2000 142 9 25 chr20 35419989 35420306 -36733576 - AluSx SINE Alu 0 312 1 2071 143 0 0 chr20 35420322 35420629 -36733253 - AluY SINE Alu -4 307 1 1272 154 38 110 chr20 35420859 35421178 -36732704 + AluJb SINE Alu 1 296 -16 753 189 0 40 chr20 35422124 35422272 -36731610 - FLAM_C SINE Alu 0 143 2 2293 110 0 7 chr20 35422487 35422795 -36731087 - AluSx SINE Alu -6 306 1 23 54 0 0 chr20 35422912 35422949 -36730933 + AT_rich Low_complexity Low_complexity 1 37 0 203 162 0 0 chr20 35422975 35423012 -36730870 + MER5B DNA MER1_type 4 40 -138 * 583 184 10 0 chr20 35423008 35423106 -36730776 - MER5A DNA MER1_type -85 104 6 493 273 108 26 chr20 35423636 35423867 -36730015 - MIR SINE MIR -11 251 2 1990 112 3 18 chr20 35424023 35424333 -36729549 - AluSx SINE Alu 0 306 1 232 352 149 25 chr20 35424340 35424686 -36729196 - L2 LINE L2 -576 2738 2436 1774 164 7 10 chr20 35424686 35424985 -36728897 + AluJo SINE Alu 1 298 -14 232 352 149 25 chr20 35424985 35425308 -36728574 - L2 LINE L2 -878 2436 1986 2346 87 0 29 chr20 35425313 35425624 -36728258 + AluSx SINE Alu 1 302 -10 1753 186 0 6 chr20 35426228 35426540 -36727342 + AluSx SINE Alu 1 310 -2 2384 84 0 0 chr20 35426563 35426861 -36727021 + AluSq SINE Alu 1 298 -15 1576 142 91 4 chr20 35426954 35427228 -36726654 + AluJb SINE Alu 1 298 -14 21 0 0 0 chr20 35427481 35427502 -36726380 + AT_rich Low_complexity Low_complexity 1 21 0 1574 179 15 97 chr20 35427549 35427878 -36726004 + AluJb SINE Alu 1 302 0 2132 136 0 16 chr20 35428707 35429024 -36724858 - AluSx SINE Alu 0 312 1 224 385 0 26 chr20 35429854 35429932 -36723950 - MIR SINE MIR -117 91 16 365 314 154 6 chr20 35430181 35430337 -36723545 - MER5A DNA MER1_type -1 188 10 1913 152 0 7 chr20 35430406 35430708 -36723174 + AluSx SINE Alu 8 307 -5 425 151 70 12 chr20 35430708 35430788 -36723094 + L1MA9 LINE L1 6172 6256 -56 1719 181 0 3 chr20 35430863 35431161 -36722721 - AluJb SINE Alu -15 297 1 1685 153 14 14 chr20 35432828 35433122 -36720760 - AluJb SINE Alu -10 302 9 2059 102 25 7 chr20 35434010 35434293 -36719589 - AluSx SINE Alu -10 302 15 2370 87 0 3 chr20 35434543 35434843 -36719039 + AluSq SINE Alu 1 299 -14 1064 179 0 0 chr20 35434967 35435146 -36718736 - AluSg/x SINE Alu 0 310 132 2181 133 0 0 chr20 35435146 35435440 -36718442 - AluSx SINE Alu -18 294 1 905 159 0 0 chr20 35436075 35436207 -36717675 - FLAM_C SINE Alu -1 132 1 2377 73 0 10 chr20 35436246 35436546 -36717336 + AluY SINE Alu 1 297 -14 2183 84 18 0 chr20 35436786 35437070 -36716812 + AluSc SINE Alu 3 291 -18 1530 191 14 4 chr20 35437257 35437534 -36716348 + AluJo SINE Alu 1 280 -32 309 230 79 50 chr20 35437573 35437712 -36716170 + L1MD2 LINE L1 5610 5752 -369 2288 84 3 14 chr20 35437856 35438153 -36715729 + AluSp SINE Alu 1 294 -19 1900 146 3 10 chr20 35438197 35438498 -36715384 - AluSx SINE Alu -13 299 1 612 285 88 18 chr20 35440324 35440552 -36713330 + MIR SINE MIR 13 256 -6 21 0 0 0 chr20 35440726 35440747 -36713135 + AT_rich Low_complexity Low_complexity 1 21 0 608 234 162 40 chr20 35441463 35441662 -36712220 + L1MC5 LINE L1 7477 7650 -311 2364 75 0 16 chr20 35441662 35441968 -36711914 + AluSg SINE Alu 1 301 -9 608 234 162 40 chr20 35441968 35442119 -36711763 + L1MC5 LINE L1 7650 7870 -91 22 35 0 0 chr20 35442646 35442675 -36711207 + AT_rich Low_complexity Low_complexity 1 29 0 26 0 0 0 chr20 35442741 35442767 -36711115 + AT_rich Low_complexity Low_complexity 1 26 0 1283 219 66 101 chr20 35443291 35443866 -36710016 + L1MD2 LINE L1 5804 6358 -1 2214 121 0 7 chr20 35444560 35444865 -36709017 + AluSx SINE Alu 1 303 -9 1010 177 0 0 chr20 35444865 35445029 -36708853 + AluJb SINE Alu 134 297 -15 1767 179 3 10 chr20 35445340 35445647 -36708235 + AluJb SINE Alu 1 305 -7 808 220 38 6 chr20 35446232 35446391 -36707491 - FAM SINE Alu -11 164 1 1683 157 64 4 chr20 35446893 35447174 -36706708 + AluJb SINE Alu 10 307 -5 2080 139 0 16 chr20 35447266 35447582 -36706300 + AluSx SINE Alu 1 311 -1 22 0 0 0 chr20 35447595 35447617 -36706265 + AT_rich Low_complexity Low_complexity 1 22 0 2739 20 0 0 chr20 35447690 35447991 -36705891 - AluY SINE Alu -10 301 1 2295 101 0 3 chr20 35448372 35448679 -36705203 - AluSq SINE Alu -1 312 7 1822 109 36 53 chr20 35449029 35449332 -36704550 - AluSx SINE Alu -14 298 1 296 200 13 0 chr20 35449694 35449769 -36704113 + (TA)n Simple_repeat Simple_repeat 1 76 0 928 135 0 0 chr20 35449769 35449902 -36703980 - AluJb SINE Alu -2 310 178 781 145 0 0 chr20 35450082 35450199 -36703683 + AluJb SINE Alu 178 294 -18 265 173 13 13 chr20 35450199 35450274 -36703608 + (TA)n Simple_repeat Simple_repeat 2 76 0 980 138 0 13 chr20 35450283 35450435 -36703447 - AluJb SINE Alu -161 151 2 344 282 130 23 chr20 35450500 35450631 -36703251 + MIR SINE MIR 47 191 -71 1505 175 46 23 chr20 35451231 35451534 -36702348 + AluJo SINE Alu 3 312 0 21 36 0 0 chr20 35451559 35451587 -36702295 + AT_rich Low_complexity Low_complexity 1 28 0 574 264 40 24 chr20 35451613 35451863 -36702019 + Charlie4 DNA MER1_type 1 254 -1707 566 138 0 0 chr20 35451912 35451999 -36701883 - FLAM_A SINE Alu -34 108 22 1787 191 103 19 chr20 35452065 35452494 -36701388 - MLT1C LTR MaLR -2 465 1 506 249 79 33 chr20 35452553 35452814 -36701068 - MER77 LTR ERV1 -4 601 408 481 221 152 125 chr20 35452859 35453148 -36700734 - MER77 LTR ERV1 -253 352 56 527 155 0 21 chr20 35453224 35453321 -36700561 + AluSg/x SINE Alu 217 311 -1 1262 132 10 29 chr20 35453734 35453964 -36699918 - AluJo SINE Alu 0 309 84 314 294 128 0 chr20 35454116 35454225 -36699657 - MIR SINE MIR -56 206 84 1605 192 3 14 chr20 35454292 35454584 -36699298 + AluJo SINE Alu 1 289 -23 2161 85 26 26 chr20 35454983 35455288 -36698594 + AluSg SINE Alu 1 305 -5 238 308 123 15 chr20 35455396 35455526 -36698356 - L2 LINE L2 -886 2428 2285 5038 186 55 67 chr20 35456170 35456635 -36697247 - L1MB3 LINE L1 -9 6174 5705 2257 100 0 0 chr20 35456635 35456924 -36696958 + AluSx SINE Alu 1 289 -23 5038 186 55 67 chr20 35456924 35456986 -36696896 - L1MB3 LINE L1 -478 5705 5644 216 0 0 0 chr20 35456986 35457010 -36696872 + (TTAGGG)n Simple_repeat Simple_repeat 2 25 0 5038 186 55 67 chr20 35457010 35457524 -36696358 - L1MB3 LINE L1 -539 5644 5125 2248 85 0 44 chr20 35457524 35457842 -36696040 - AluY SINE Alu -7 304 1 5038 186 55 67 chr20 35457842 35457859 -36696023 - L1MB3 LINE L1 -1058 5125 5109 2111 115 3 31 chr20 35457859 35458181 -36695701 - AluSp SINE Alu 0 313 1 5038 186 55 67 chr20 35458181 35458268 -36695614 - L1MB3 LINE L1 -1074 5109 5022 2104 118 0 7 chr20 35458268 35458564 -36695318 - AluSg SINE Alu -16 294 1 5038 186 55 67 chr20 35458564 35459937 -36693945 - L1MB3 LINE L1 -1161 5022 3689 288 229 10 31 chr20 35460121 35460217 -36693665 - MLT1J LTR MaLR -4 507 414 905 238 58 19 chr20 35460246 35460611 -36693271 + L1M4 LINE L1 2887 3265 -2881 1931 150 23 3 chr20 35460801 35461101 -36692781 + AluJb SINE Alu 1 306 -6 1613 86 5 0 chr20 35461227 35461436 -36692446 - AluSp SINE Alu 0 313 104 296 179 0 0 chr20 35461438 35461494 -36692388 + Alu SINE Alu 238 293 -7 1135 238 77 32 chr20 35461499 35461589 -36692293 + L1M4 LINE L1 3875 3959 -2187 2483 77 0 0 chr20 35461589 35461888 -36691994 - AluY SINE Alu -12 299 1 1135 238 77 32 chr20 35461888 35462063 -36691819 + L1M4 LINE L1 3959 4125 -2021 2290 113 0 0 chr20 35462063 35462374 -36691508 + AluSx SINE Alu 1 311 -1 1135 238 77 32 chr20 35462374 35462548 -36691334 + L1M4 LINE L1 4125 4335 -1811 438 270 110 105 chr20 35462596 35462777 -36691105 - MLT1J LTR MaLR -110 401 222 291 28 0 0 chr20 35462777 35462813 -36691069 + (CA)n Simple_repeat Simple_repeat 2 37 0 438 270 110 105 chr20 35462813 35462851 -36691031 - MLT1J LTR MaLR -289 222 186 2060 133 0 7 chr20 35462851 35463145 -36690737 - AluSx SINE Alu -20 292 1 438 270 110 105 chr20 35463145 35463316 -36690566 - MLT1J LTR MaLR -325 186 8 615 182 0 0 chr20 35463878 35463977 -36689905 + FLAM_C SINE Alu 24 122 -21 24 32 0 0 chr20 35463977 35464008 -36689874 + AT_rich Low_complexity Low_complexity 1 31 0 1784 179 27 0 chr20 35464140 35464437 -36689445 - AluJo SINE Alu -5 307 3 378 0 0 0 chr20 35465228 35465270 -36688612 + (TG)n Simple_repeat Simple_repeat 2 43 0 2141 102 43 23 chr20 35465649 35465952 -36687930 + AluSq SINE Alu 2 310 -3 192 347 53 0 chr20 35467443 35467518 -36686364 + MIR SINE MIR 38 116 -92 10695 36 3 103 chr20 35467718 35469256 -36684626 - SVA Other Other -1 1385 1 22 0 0 0 chr20 35469419 35469441 -36684441 + AT_rich Low_complexity Low_complexity 1 22 0 2112 117 13 0 chr20 35470803 35471103 -36682779 + AluSp SINE Alu 1 304 -9 26 50 0 0 chr20 35471117 35471157 -36682725 + AT_rich Low_complexity Low_complexity 1 40 0 334 249 236 18 chr20 35471572 35471737 -36682145 - MIR SINE MIR -10 252 52 301 267 253 7 chr20 35472058 35472204 -36681678 + MIR SINE MIR 7 188 -74 21 57 0 0 chr20 35472304 35472339 -36681543 + AT_rich Low_complexity Low_complexity 1 35 0 247 188 31 0 chr20 35472833 35472897 -36680985 + HsTC2 DNA Tc2 3 68 -1830 2249 138 0 0 chr20 35473442 35473753 -36680129 - AluSx SINE Alu -1 311 1 2243 102 0 14 chr20 35473762 35474056 -36679826 - AluSp SINE Alu -23 290 1 1842 127 22 115 chr20 35475069 35475285 -36678597 - THE1B LTR MaLR 0 364 200 2214 117 0 0 chr20 35475285 35475576 -36678306 + AluSc SINE Alu 1 291 -18 1842 127 22 115 chr20 35475576 35475760 -36678122 - THE1B LTR MaLR -164 200 1 11229 96 5 14 chr20 35475760 35477355 -36676527 - THE1B-int LTR MaLR 0 1580 1 2151 110 25 25 chr20 35477355 35477709 -36676173 - THE1B LTR MaLR -10 354 1 275 190 89 0 chr20 35478253 35478332 -36675550 - L1ME2 LINE L1 -2 6231 6146 1873 194 141 28 chr20 35478518 35479171 -36674711 - L1ME2 LINE L1 -177 6054 5328 1274 183 8 32 chr20 35479248 35479494 -36674388 - AluJo SINE Alu -21 291 52 316 182 0 118 chr20 35479495 35479566 -36674316 - L1ME2 LINE L1 -3108 3107 3029 1531 204 3 29 chr20 35479566 35479874 -36674008 - AluJo SINE Alu -12 300 1 2203 123 0 0 chr20 35479880 35480180 -36673702 - AluSx SINE Alu -12 300 1 316 182 0 118 chr20 35480180 35480211 -36673671 - L1ME2 LINE L1 -3191 3024 3011 230 0 0 32 chr20 35480211 35480242 -36673640 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 1530 168 58 17 chr20 35480245 35480536 -36673346 - AluJb SINE Alu -9 303 1 2251 94 7 3 chr20 35480567 35480866 -36673016 - AluY SINE Alu -11 300 1 1171 236 85 62 chr20 35480867 35481211 -36672671 - L1ME2 LINE L1 -4072 2324 1990 2298 113 0 0 chr20 35481211 35481511 -36672371 + AluSq SINE Alu 1 300 -13 1171 236 85 62 chr20 35481511 35481881 -36672001 - L1ME2 LINE L1 -4406 1990 1593 410 261 87 79 chr20 35481893 35481987 -36671895 + L1MC5 LINE L1 7666 7758 -203 2026 148 10 3 chr20 35481987 35482297 -36671585 + AluSx SINE Alu 1 312 0 410 261 87 79 chr20 35482297 35482320 -36671562 + L1MC5 LINE L1 7758 7779 -182 1591 198 0 3 chr20 35482320 35482608 -36671274 + AluJo SINE Alu 11 297 -15 410 261 87 79 chr20 35482608 35482742 -36671140 + L1MC5 LINE L1 7779 7920 -41 1094 200 113 40 chr20 35483863 35483943 -36669939 + L1MB4 LINE L1 5360 5433 -735 1837 117 98 0 chr20 35483943 35484208 -36669674 + AluSg SINE Alu 1 291 -19 1094 200 113 40 chr20 35484208 35484473 -36669409 + L1MB4 LINE L1 5433 5733 -435 368 198 70 0 chr20 35484485 35484571 -36669311 - Tigger5 DNA MER2_type 0 2323 2232 301 149 0 0 chr20 35484617 35484661 -36669221 - Tigger5 DNA MER2_type -2268 55 12 281 200 14 29 chr20 35484661 35484731 -36669151 - Tigger5 DNA MER2_type -1 2322 2254 1774 148 34 31 chr20 35484746 35485132 -36668750 + L1MB4 LINE L1 5794 6180 0 832 193 0 29 chr20 35485798 35485969 -36667913 + FRAM SINE Alu 1 160 -16 272 294 79 48 chr20 35486529 35486655 -36667227 + L2 LINE L2 3141 3270 -2 1960 142 7 3 chr20 35487503 35487798 -36666084 + AluSx SINE Alu 1 296 -16 3384 142 34 57 chr20 35488054 35488233 -36665649 - L1MA5 LINE L1 -2 7000 6818 1774 186 0 0 chr20 35488233 35488518 -36665364 + AluJb SINE Alu 3 287 -25 2050 98 0 44 chr20 35488526 35488849 -36665033 + AluSq SINE Alu 3 312 0 207 0 0 0 chr20 35488849 35488872 -36665010 + (TA)n Simple_repeat Simple_repeat 1 23 0 3384 142 34 57 chr20 35488872 35489387 -36664495 - L1MA5 LINE L1 -189 6813 6311 1197 146 98 93 chr20 35489387 35489633 -36664249 + AluSx SINE Alu 41 287 -25 12307 165 63 49 chr20 35489645 35490078 -36663804 - L1MA5 LINE L1 -742 6257 5832 2407 87 10 0 chr20 35490078 35490388 -36663494 + AluSp SINE Alu 1 313 0 12307 165 63 49 chr20 35490388 35490557 -36663325 - L1MA5 LINE L1 -1167 5832 5667 2137 134 0 0 chr20 35490557 35490849 -36663033 - AluSg SINE Alu -18 292 1 12307 165 63 49 chr20 35490849 35491125 -36662757 - L1MA5 LINE L1 -1332 5667 5396 1986 150 3 7 chr20 35491125 35491432 -36662450 - AluSx SINE Alu -6 306 1 12307 165 63 49 chr20 35491432 35492531 -36661351 - L1MA5 LINE L1 -1603 5396 4314 2363 84 0 0 chr20 35492531 35492828 -36661054 - AluY SINE Alu -14 297 1 420 45 30 0 chr20 35492831 35492897 -36660985 - AluY SINE Alu 0 309 242 12307 165 63 49 chr20 35492897 35494676 -36659206 - L1MA5 LINE L1 -2686 4313 2402 432 253 89 42 chr20 35494752 35494989 -36658893 - MER20B DNA MER1_type -21 762 515 2462 76 3 0 chr20 35495048 35495349 -36658533 + AluSp SINE Alu 1 302 -11 925 214 6 6 chr20 35495791 35495964 -36657918 + FAM SINE Alu 1 173 -2 2161 101 42 0 chr20 35495983 35496270 -36657612 + AluSq SINE Alu 1 299 -14 1982 137 25 0 chr20 35496295 35496572 -36657310 + AluSx SINE Alu 5 288 -24 341 276 45 22 chr20 35496776 35496910 -36656972 - MER20B DNA MER1_type -591 192 56 432 231 19 7 chr20 35497291 35497384 -36656498 - MER5A DNA MER1_type -3 186 82 1980 181 3 0 chr20 35497425 35497735 -36656147 - AluSx SINE Alu -1 311 1 510 195 9 26 chr20 35497735 35497848 -36656034 - MER5A DNA MER1_type -77 112 2 259 274 0 0 chr20 35498037 35498110 -36655772 - L1MB7 LINE L1 -72 6112 6040 1519 165 25 87 chr20 35498502 35498582 -36655300 - L1MB7 LINE L1 -3 6181 6098 255 31 0 0 chr20 35498582 35498614 -36655268 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 2142 123 0 0 chr20 35498614 35498898 -36654984 - AluSx SINE Alu -28 284 1 1519 165 25 87 chr20 35498898 35499114 -36654768 - L1MB7 LINE L1 -85 6099 5911 2239 85 7 10 chr20 35499114 35499408 -36654474 - AluSg SINE Alu -17 293 1 1519 165 25 87 chr20 35499408 35499502 -36654380 - L1MB7 LINE L1 -273 5911 5813 3544 133 75 105 chr20 35499505 35499624 -36654258 - L1MB3 LINE L1 -5 6178 6057 1574 190 7 0 chr20 35499624 35499898 -36653984 - AluJb SINE Alu -16 296 21 3544 133 75 105 chr20 35499898 35499957 -36653925 - L1MB3 LINE L1 -126 6057 5998 1924 132 97 13 chr20 35499957 35500268 -36653614 + MER1B DNA MER1_type 1 337 0 3544 133 75 105 chr20 35500268 35501147 -36652735 - L1MB3 LINE L1 -185 5998 5162 858 120 0 0 chr20 35502083 35502200 -36651682 + FLAM_C SINE Alu 1 117 -16 243 0 0 0 chr20 35503998 35504025 -36649857 + (T)n Simple_repeat Simple_repeat 1 27 0 584 111 89 0 chr20 35504298 35504388 -36649494 + FLAM_A SINE Alu 35 132 -10 4604 98 28 18 chr20 35505101 35505754 -36648128 - PABL_A LTR ERV1 0 660 2 229 300 221 0 chr20 35506783 35506923 -36646959 - MIR SINE MIR 0 262 92 291 309 122 42 chr20 35507055 35507093 -36646789 + L2 LINE L2 2492 2526 -788 2284 72 14 3 chr20 35507093 35507383 -36646499 - AluSx SINE Alu -19 293 1 291 309 122 42 chr20 35507383 35507606 -36646276 + L2 LINE L2 2526 2774 -540 2344 74 7 10 chr20 35507607 35507905 -36645977 - AluSg SINE Alu -13 297 1 1672 207 147 19 chr20 35508204 35508716 -36645166 - L1MD3 LINE L1 -1 7994 7418 2114 99 7 13 chr20 35509446 35509749 -36644133 - AluJo SINE Alu -11 301 1 367 307 98 44 chr20 35510342 35510547 -36643335 - MIR SINE MIR -9 253 38 612 105 0 112 chr20 35511047 35511175 -36642707 - L1MA4 LINE L1 -11 6289 6177 2300 92 0 29 chr20 35511175 35511491 -36642391 - AluY SINE Alu -4 307 1 612 105 0 112 chr20 35511491 35511505 -36642377 - L1MA4 LINE L1 -123 6177 6163 819 149 48 18 chr20 35511505 35511673 -36642209 - L1M1 LINE L1 -537 5766 5594 1349 143 29 0 chr20 35511691 35511935 -36641947 - L1M1 LINE L1 -1262 4884 4634 1467 138 0 30 chr20 35512077 35512308 -36641574 - AluJb SINE Alu -88 224 1 1992 107 0 91 chr20 35512447 35512766 -36641116 - AluSx SINE Alu -12 300 11 329 342 80 10 chr20 35512771 35512970 -36640912 - L1ME4a LINE L1 -35 6086 5874 554 176 0 0 chr20 35512972 35513057 -36640825 + AluJb SINE Alu 179 263 -49 369 320 41 8 chr20 35513089 35513211 -36640671 - L1MC4a LINE L1 -1890 5918 5793 253 244 110 16 chr20 35513212 35513339 -36640543 - L1MC4a LINE L1 -2050 5758 5620 2025 141 16 0 chr20 35513406 35513711 -36640171 + AluSx SINE Alu 1 310 -2 270 276 39 102 chr20 35513913 35513995 -36639887 - L1ME4a LINE L1 -305 5816 5730 2214 127 0 7 chr20 35513995 35514303 -36639579 - AluSx SINE Alu -6 306 1 270 276 39 102 chr20 35514303 35514474 -36639408 - L1ME4a LINE L1 -391 5730 5579 2127 127 27 0 chr20 35514566 35514865 -36639017 - AluSx SINE Alu -5 307 1 1780 153 46 0 chr20 35515319 35515600 -36638282 + AluJb SINE Alu 1 294 -18 374 242 33 0 chr20 35515687 35515778 -36638104 + L2 LINE L2 3164 3257 -56 326 337 135 0 chr20 35515770 35515933 -36637949 + MIR SINE MIR 62 246 -16 * 2024 148 10 10 chr20 35516018 35516328 -36637554 - AluJb SINE Alu -2 310 1 407 235 49 56 chr20 35516337 35516499 -36637383 - L3 LINE CR1 -607 970 810 920 285 106 17 chr20 35516830 35517418 -36636464 + L2 LINE L2 2657 3309 -4 280 314 74 48 chr20 35517430 35517659 -36636223 - L3 LINE CR1 -771 806 572 332 286 65 22 chr20 35517829 35518014 -36635868 - L1ME4a LINE L1 -224 5897 5705 182 240 53 93 chr20 35518094 35518169 -36635713 + L2 LINE L2 3236 3307 -6 2280 86 17 7 chr20 35518276 35518578 -36635304 - AluY SINE Alu -6 305 1 204 40 0 0 chr20 35520037 35520062 -36633820 + (T)n Simple_repeat Simple_repeat 1 25 0 684 74 53 0 chr20 35520066 35520161 -36633721 - HY3 scRNA scRNA -1 100 1 207 289 89 4 chr20 35520647 35520737 -36633145 - MIR SINE MIR -65 143 40 529 232 181 23 chr20 35520816 35520993 -36632889 + MIR SINE MIR 19 223 -39 392 355 7 13 chr20 35521103 35521258 -36632624 - MER5A DNA MER1_type 0 189 36 2955 3 0 0 chr20 35521585 35521896 -36631986 + AluYa5 SINE Alu 1 311 0 1519 151 28 85 chr20 35522238 35522557 -36631325 + AluJo SINE Alu 1 301 -11 2512 74 0 0 chr20 35523000 35523299 -36630583 + AluSq SINE Alu 1 299 -14 184 347 31 10 chr20 35523426 35523524 -36630358 + MIR SINE MIR 32 131 -77 534 278 49 25 chr20 35523822 35523984 -36629898 + MIR SINE MIR 6 171 -91 337 241 57 71 chr20 35524088 35524229 -36629653 - MIR SINE MIR -70 192 54 386 252 37 19 chr20 35524662 35524769 -36629113 + L2 LINE L2 3197 3305 -8 239 270 40 0 chr20 35525229 35525303 -36628579 - L2 LINE L2 -61 3252 3176 462 286 97 25 chr20 35525749 35525945 -36627937 - MIR SINE MIR -14 248 39 2405 104 0 0 chr20 35527092 35527400 -36626482 + AluSg SINE Alu 1 308 -2 2215 80 38 14 chr20 35527408 35527695 -36626187 + AluSx SINE Alu 1 294 -18 256 328 121 15 chr20 35527877 35528075 -36625807 + MIR SINE MIR 36 254 -8 222 341 0 44 chr20 35528636 35528771 -36625111 - L2 LINE L2 -182 3090 2962 206 290 116 65 chr20 35529738 35529876 -36624006 + MIR3 SINE MIR 22 166 -42 2464 77 0 0 chr20 35530022 35530319 -36623563 + AluSg SINE Alu 5 301 -9 244 171 0 0 chr20 35530912 35530953 -36622929 + L2 LINE L2 3182 3222 -91 1689 103 121 50 chr20 35531539 35531821 -36622061 - AluJo SINE Alu -10 302 1 1170 98 37 0 chr20 35531845 35532008 -36621874 + AluJb SINE Alu 134 302 -10 212 264 80 48 chr20 35532387 35532512 -36621370 + MIR3 SINE MIR 4 132 -76 1722 141 12 87 chr20 35532951 35533075 -36620807 + AluJb SINE Alu 1 133 -179 1913 124 76 0 chr20 35533075 35533350 -36620532 - AluSx SINE Alu -16 296 1 1722 141 12 87 chr20 35533350 35533559 -36620323 + AluJb SINE Alu 133 309 -3 207 267 0 0 chr20 35533590 35533635 -36620247 + MIR SINE MIR 56 100 -162 * 526 182 189 40 chr20 35533633 35533781 -36620101 + MER5A DNA MER1_type 17 186 -3 329 333 0 31 chr20 35533781 35533910 -36619972 + MIR SINE MIR 86 210 -52 1759 146 38 14 chr20 35536122 35536410 -36617472 + AluJo SINE Alu 1 295 -17 2292 105 0 7 chr20 35536462 35536768 -36617114 - AluSx SINE Alu -8 304 1 371 216 179 58 chr20 35536961 35537151 -36616731 - L1MC4 LINE L1 -1 8041 7829 300 174 326 28 chr20 35537185 35537329 -36616553 - L1ME2 LINE L1 -14 6150 5964 245 267 67 0 chr20 35537776 35537851 -36616031 + Tigger8 DNA MER2_type 406 485 -181 1666 148 11 25 chr20 35538744 35539022 -36614860 - AluSx SINE Alu -37 275 2 637 258 169 22 chr20 35539269 35539672 -36614210 - L2 LINE L2 -655 2659 2198 1903 146 39 0 chr20 35539673 35539954 -36613928 + AluJb SINE Alu 1 292 -20 2405 84 7 0 chr20 35539963 35540261 -36613621 + AluSp SINE Alu 1 300 -13 464 322 6 23 chr20 35540261 35540438 -36613444 - MLT1J LTR MaLR -219 292 119 200 247 91 0 chr20 35540521 35540598 -36613284 - L2 LINE L2 -1714 1600 1517 27 0 0 0 chr20 35540923 35540950 -36612932 + AT_rich Low_complexity Low_complexity 1 27 0 615 95 175 71 chr20 35540971 35541021 -36612861 - FLAM_C SINE Alu -172 140 97 1826 147 73 20 chr20 35541021 35541375 -36612507 + THE1C LTR MaLR 1 373 -2 615 95 175 71 chr20 35541375 35541450 -36612432 - FLAM_C SINE Alu -215 97 2 2402 100 0 0 chr20 35542259 35542559 -36611323 - AluSq SINE Alu -13 300 1 2060 131 27 0 chr20 35542582 35542879 -36611003 - AluSx SINE Alu -7 305 1 1352 229 73 5 chr20 35543032 35543416 -36610466 - MER66A LTR ERV1 -40 438 29 214 276 133 19 chr20 35543878 35543983 -36609899 - L2 LINE L2 -87 3185 3069 * 410 242 86 16 chr20 35543976 35544104 -36609778 - L2 LINE L2 -2 3311 3175 1696 234 70 66 chr20 35544117 35544523 -36609359 + L1ME2 LINE L1 5423 5826 -338 2004 128 21 21 chr20 35544523 35544812 -36609070 + AluSg SINE Alu 5 293 -17 1696 234 70 66 chr20 35544812 35545021 -36608861 + L1ME2 LINE L1 5826 6044 -120 1992 84 54 27 chr20 35545021 35545317 -36608565 - AluSx SINE Alu -8 304 1 1696 234 70 66 chr20 35545317 35545425 -36608457 + L1ME2 LINE L1 6044 6150 -14 302 255 98 10 chr20 35545459 35545561 -36608321 + L1MC4 LINE L1 7837 7947 -95 1939 132 3 17 chr20 35545562 35545851 -36608031 - AluSx SINE Alu -26 286 2 985 240 185 47 chr20 35545966 35546460 -36607422 - L2 LINE L2 -263 3050 2388 2050 146 7 3 chr20 35546460 35546769 -36607113 + AluSq SINE Alu 1 310 -3 985 240 185 47 chr20 35546769 35546937 -36606945 - L2 LINE L2 -925 2388 2245 752 215 149 5 chr20 35547178 35547373 -36606509 + MER58A DNA MER1_type 1 223 -1 460 271 123 30 chr20 35547425 35547661 -36606221 - L1ME LINE L1 -363 5758 5501 2622 71 0 0 chr20 35547916 35548225 -36605657 - AluSc SINE Alu 0 309 1 1672 123 6 126 chr20 35548227 35548561 -36605321 - AluJb SINE Alu -18 294 1 1105 151 76 23 chr20 35548634 35548693 -36605189 - AluJo SINE Alu -104 208 154 2275 121 3 3 chr20 35548693 35548998 -36604884 - AluSx SINE Alu -7 305 1 1105 151 76 23 chr20 35548998 35549110 -36604772 - AluJo SINE Alu -158 154 24 844 228 0 6 chr20 35549207 35549369 -36604513 - FRAM SINE Alu -15 161 1 2605 53 7 0 chr20 35549391 35549695 -36604187 - AluY SINE Alu -5 306 1 22 0 0 0 chr20 35549738 35549760 -36604122 + AT_rich Low_complexity Low_complexity 1 22 0 391 283 90 93 chr20 35549820 35550153 -36603729 - L1MDa LINE L1 -3346 3194 2861 2150 126 0 13 chr20 35550153 35550454 -36603428 - AluSx SINE Alu -15 297 1 266 255 104 24 chr20 35550547 35550769 -36603113 - L1MDa LINE L1 -3754 2786 2542 2233 78 0 14 chr20 35551198 35551479 -36602403 + AluSc SINE Alu 1 277 -32 205 162 0 0 chr20 35552652 35552689 -36601193 + G-rich Low_complexity Low_complexity 1 37 0 465 294 148 52 chr20 35554759 35555597 -36598285 + L2 LINE L2 2239 3235 -37 222 305 160 0 chr20 35555839 35555970 -36597912 - MIR3 SINE MIR -27 181 30 297 227 15 30 chr20 35556134 35556200 -36597682 - MIR SINE MIR -115 147 83 513 123 0 12 chr20 35556603 35556684 -36597198 - MER116 DNA Mariner 0 80 1 2196 76 62 3 chr20 35556839 35557128 -36596754 + AluSp SINE Alu 1 306 -7 2327 200 44 61 chr20 35557151 35557929 -36595953 + L1MD3 LINE L1 7019 7995 0 629 222 48 0 chr20 35557940 35558066 -36595816 + FLAM_A SINE Alu 1 132 -1 255 190 77 22 chr20 35558713 35558795 -36595087 + MIR SINE MIR 80 144 -64 2047 79 28 38 chr20 35558820 35559111 -36594771 - AluSc SINE Alu -21 288 1 396 235 0 18 chr20 35559262 35559428 -36594454 + (CA)n Simple_repeat Simple_repeat 2 164 0 285 293 0 20 chr20 35559444 35559543 -36594339 + (CA)n Simple_repeat Simple_repeat 2 98 0 277 217 0 19 chr20 35559559 35559665 -36594217 + (CA)n Simple_repeat Simple_repeat 2 105 0 194 135 54 0 chr20 35560351 35560388 -36593494 - L2 LINE L2 -17 3255 3217 258 32 0 0 chr20 35561356 35561387 -36592495 + (TC)n Simple_repeat Simple_repeat 1 31 0 398 284 234 21 chr20 35561425 35561664 -36592218 + L2 LINE L2 2983 3272 0 1878 145 26 19 chr20 35562481 35562791 -36591091 + AluJo SINE Alu 1 312 0 1900 144 3 10 chr20 35562792 35563084 -36590798 - AluSq SINE Alu -23 290 1 355 284 0 11 chr20 35563374 35563469 -36590413 - L2 LINE L2 -48 3265 3172 * 514 239 110 7 chr20 35563449 35563604 -36590278 + MIR SINE MIR 19 189 -73 2134 98 56 3 chr20 35563964 35564250 -36589632 - AluSc SINE Alu -8 301 1 320 233 70 23 chr20 35564583 35564669 -36589213 - MIR SINE MIR -77 185 96 202 156 0 0 chr20 35565270 35565302 -36588580 - L2 LINE L2 -259 3054 3023 365 315 27 13 chr20 35565546 35565695 -36588187 + L1ME LINE L1 5532 5682 -439 230 97 16 81 chr20 35565724 35565786 -36588096 + (TTTA)n Simple_repeat Simple_repeat 3 60 0 717 121 0 0 chr20 35565788 35565887 -36587995 - AluS SINE Alu -213 99 1 2120 142 0 22 chr20 35565918 35566229 -36587653 + AluSx SINE Alu 1 304 -8 788 207 0 0 chr20 35566563 35566703 -36587179 - FLAM_C SINE Alu -2 141 2 269 318 40 56 chr20 35567781 35567907 -36585975 + MER5A DNA MER1_type 24 147 -42 201 111 0 0 chr20 35567958 35567985 -36585897 - MER5A DNA MER1_type -113 76 50 222 281 79 11 chr20 35568339 35568428 -36585454 + MIR SINE MIR 86 180 -82 287 226 243 18 chr20 35569498 35569629 -36584253 + MIR SINE MIR 12 164 -62 960 98 0 49 chr20 35569650 35569793 -36584089 + FLAM_C SINE Alu 5 140 -3 611 194 70 9 chr20 35569889 35570161 -36583721 - MLT1D LTR MaLR -3 502 180 892 177 0 0 chr20 35570185 35570326 -36583556 - FRAM SINE Alu -22 154 14 474 138 100 0 chr20 35570336 35570416 -36583466 - L1MC1 LINE L1 -6 6327 6240 780 161 115 35 chr20 35570418 35570592 -36583290 - MLT1D LTR MaLR -317 188 1 28 48 0 0 chr20 35570670 35570712 -36583170 + AT_rich Low_complexity Low_complexity 1 42 0 209 289 0 0 chr20 35570728 35570773 -36583109 + L2 LINE L2 3210 3254 -18 2171 125 0 0 chr20 35570987 35571308 -36582574 + AluSx SINE Alu 1 312 0 511 184 58 39 chr20 35571321 35571424 -36582458 + MER5B DNA MER1_type 74 178 0 186 238 25 75 chr20 35572473 35572553 -36581329 + MIR SINE MIR 49 124 -84 343 289 114 30 chr20 35573473 35573639 -36580243 - MIR SINE MIR -51 211 32 289 317 69 10 chr20 35574234 35574335 -36579547 - L2 LINE L2 -10 3262 3156 459 168 376 0 chr20 35574547 35574696 -36579186 - MER3 DNA MER1_type -4 205 1 887 228 44 35 chr20 35574698 35574926 -36578956 + MIR SINE MIR 34 262 0 2007 151 7 7 chr20 35575951 35576250 -36577632 + AluJb SINE Alu 1 299 -13 231 230 69 67 chr20 35576250 35576339 -36577543 - MIR SINE MIR -56 152 62 722 265 47 42 chr20 35577634 35577849 -36576033 + MIR SINE MIR 23 238 -24 1884 134 9 70 chr20 35578055 35578233 -36575649 - AluJo SINE Alu -3 309 122 210 37 0 0 chr20 35578233 35578260 -36575622 + (TTG)n Simple_repeat Simple_repeat 1 27 0 2077 133 0 0 chr20 35578260 35578539 -36575343 - AluSx SINE Alu -31 281 3 1884 134 9 70 chr20 35578539 35578688 -36575194 - AluJo SINE Alu -188 124 1 315 274 179 8 chr20 35580142 35580259 -36573623 + L2 LINE L2 3136 3272 0 900 85 78 0 chr20 35580460 35580589 -36573293 + MER85 DNA T2_type 1 139 0 1041 147 16 42 chr20 35580627 35580817 -36573065 + MER5A DNA MER1_type 5 189 0 4024 147 19 42 chr20 35580911 35581557 -36572325 - L1MA7 LINE L1 -6 6285 5660 1929 109 49 0 chr20 35581557 35581823 -36572059 + AluSg SINE Alu 20 298 -12 4024 147 19 42 chr20 35581823 35581977 -36571905 - L1MA7 LINE L1 -631 5660 5504 323 283 161 12 chr20 35582325 35582574 -36571308 + L1ME LINE L1 5595 5873 -297 405 0 0 0 chr20 35582658 35582703 -36571179 + (CA)n Simple_repeat Simple_repeat 2 46 0 2266 103 3 0 chr20 35582914 35583204 -36570678 - AluSc SINE Alu -18 291 1 2437 92 7 0 chr20 35583204 35583509 -36570373 - AluSq SINE Alu -5 308 1 2040 136 0 11 chr20 35583828 35584115 -36569767 + AluSx SINE Alu 1 284 -28 647 80 0 10 chr20 35584115 35584215 -36569667 + (CATAA)n Simple_repeat Simple_repeat 2 100 0 770 250 80 83 chr20 35584230 35584294 -36569588 + L1ME2 LINE L1 2202 2265 -3881 2567 63 3 0 chr20 35584294 35584594 -36569288 + AluY SINE Alu 1 301 -10 770 250 80 83 chr20 35584594 35585165 -36568717 + L1ME2 LINE L1 2265 2835 -3311 643 113 48 8 chr20 35585195 35585319 -36568563 - L1MA8 LINE L1 -113 6178 6050 440 283 136 40 chr20 35585324 35585460 -36568422 + L1ME2 LINE L1 2860 2982 -3164 2330 90 3 6 chr20 35585460 35585771 -36568111 + AluY SINE Alu 1 310 -1 440 283 136 40 chr20 35585771 35586164 -36567718 + L1ME2 LINE L1 2982 3440 -2706 466 244 117 37 chr20 35586187 35586511 -36567371 + L1MC4 LINE L1 7616 7965 -77 1942 147 13 17 chr20 35586610 35586909 -36566973 + AluJb SINE Alu 3 300 -12 583 313 39 30 chr20 35586935 35587341 -36566541 + L1ME2 LINE L1 4644 5053 -1093 430 127 0 28 chr20 35587377 35587448 -36566434 + AluJ/FRAM SINE Alu 228 296 -16 2105 146 0 0 chr20 35587450 35587752 -36566130 + AluJb SINE Alu 3 304 -8 2060 180 48 98 chr20 35587766 35588093 -36565789 + L1MC4a LINE L1 5621 5963 -1845 1911 109 0 0 chr20 35588093 35588340 -36565542 + AluSq SINE Alu 49 295 -18 2060 180 48 98 chr20 35588340 35588364 -36565518 + L1MC4a LINE L1 5963 5987 -1821 2632 51 0 13 chr20 35588364 35588677 -36565205 + AluY SINE Alu 1 309 -2 2060 180 48 98 chr20 35588677 35588756 -36565126 + L1MC4a LINE L1 5987 6068 -1740 1938 149 65 0 chr20 35588756 35589078 -36564804 - MER2 DNA MER2_type -1 343 1 2060 180 48 98 chr20 35589078 35589371 -36564511 + L1MC4a LINE L1 6068 6310 -1498 258 125 95 2 chr20 35589371 35589605 -36564277 + AluSx SINE Alu 1 302 0 1906 217 78 8 chr20 35589609 35590144 -36563738 + L1MD3 LINE L1 7423 7995 0 447 333 71 5 chr20 35590258 35590456 -36563426 - L1M4 LINE L1 -3497 2649 2439 2027 227 119 20 chr20 35590469 35591153 -36562729 + L1ME2 LINE L1 5403 6164 0 472 294 44 44 chr20 35591186 35591366 -36562516 + L1MC4 LINE L1 7833 8012 -30 878 114 7 50 chr20 35591477 35591617 -36562265 + AluJb SINE Alu 1 134 -178 410 303 30 18 chr20 35591787 35591952 -36561930 - L2 LINE L2 -302 2970 2804 1137 161 10 36 chr20 35592415 35592608 -36561274 - AluJo SINE Alu -34 278 91 2041 146 10 0 chr20 35592724 35593018 -36560864 + AluJb SINE Alu 1 297 -15 814 198 33 0 chr20 35593437 35593619 -36560263 - MER3 DNA MER1_type -21 188 1 2135 117 47 0 chr20 35593678 35594008 -36559874 + AluSx SINE Alu 1 344 0 2449 89 3 0 chr20 35594306 35594608 -36559274 + AluSp SINE Alu 1 303 -10 1870 159 172 5 chr20 35595054 35595449 -36558433 + MER65C LTR ERV1 1 461 0 210 71 0 0 chr20 35595542 35595553 -36558329 + (TAAAA)n Simple_repeat Simple_repeat 1 11 -308 2124 121 0 0 chr20 35595553 35595833 -36558049 + AluSx SINE Alu 1 280 -32 210 71 0 0 chr20 35595833 35595861 -36558021 + (TAAAA)n Simple_repeat Simple_repeat 5 32 0 2340 112 0 0 chr20 35595868 35596173 -36557709 + AluSx SINE Alu 1 305 -7 325 307 59 40 chr20 35596232 35596434 -36557448 - L1ME3A LINE L1 0 6170 5965 2238 218 91 51 chr20 35596588 35597411 -36556471 - L1MC5 LINE L1 -469 7492 6637 260 27 27 0 chr20 35597411 35597448 -36556434 + (CA)n Simple_repeat Simple_repeat 2 39 0 376 215 69 47 chr20 35597449 35597685 -36556197 - MER102a DNA MER1_type -21 309 21 476 180 313 33 chr20 35599077 35599227 -36554655 - MIR SINE MIR 0 262 71 817 264 79 71 chr20 35599267 35599528 -36554354 - L1MC4 LINE L1 0 8042 7785 2549 66 3 0 chr20 35599528 35599830 -36554052 + AluY SINE Alu 6 303 -8 817 264 79 71 chr20 35599830 35600301 -36553581 - L1MC4 LINE L1 -257 7785 7268 2252 109 0 6 chr20 35600301 35600612 -36553270 - AluSg1 SINE Alu 0 309 1 817 264 79 71 chr20 35600612 35600746 -36553136 - L1MC4 LINE L1 -774 7268 7137 1482 221 192 22 chr20 35600747 35601325 -36552557 + LTR1B LTR ERV1 1 676 -150 668 135 0 0 chr20 35601373 35601469 -36552413 - AluJ/FLAM SINE Alu -216 96 1 2226 106 3 3 chr20 35601625 35601927 -36551955 - AluSx SINE Alu -10 302 1 426 249 61 50 chr20 35601929 35602110 -36551772 - L1MC4 LINE L1 -985 7057 6875 258 277 226 13 chr20 35602317 35602476 -36551406 - L3 LINE CR1 -81 1496 1304 1538 153 12 90 chr20 35602554 35602875 -36551007 + AluJo SINE Alu 1 296 -16 2265 123 0 13 chr20 35602902 35603218 -36550664 - AluSx SINE Alu 0 312 1 2506 92 0 12 chr20 35603306 35603644 -36550238 + THE1C LTR MaLR 1 334 -41 9957 82 21 20 chr20 35603644 35604918 -36548964 + L1PA8 LINE L1 4026 5305 -867 2348 99 0 10 chr20 35604918 35605230 -36548652 + AluSc SINE Alu 1 309 0 9957 82 21 20 chr20 35605230 35606095 -36547787 + L1PA8 LINE L1 5305 6168 -4 228 107 0 240 chr20 35606131 35606168 -36547714 + THE1C LTR MaLR 319 331 -44 2085 153 3 0 chr20 35606168 35606476 -36547406 - AluSx SINE Alu -3 309 1 228 107 0 240 chr20 35606476 35606513 -36547369 + THE1C LTR MaLR 331 375 0 21 36 0 0 chr20 35606525 35606553 -36547329 + AT_rich Low_complexity Low_complexity 1 28 0 206 358 0 0 chr20 35606862 35606929 -36546953 + L2 LINE L2 3237 3303 -10 240 241 53 87 chr20 35607276 35607483 -36546399 + L1ME LINE L1 5383 5582 -539 2013 153 0 10 chr20 35607567 35607881 -36546001 + AluJb SINE Alu 1 311 -1 1772 153 27 30 chr20 35607896 35608197 -36545685 + AluJb SINE Alu 1 300 -12 605 283 22 91 chr20 35608555 35608831 -36545051 + MIR SINE MIR 3 259 -3 271 310 90 10 chr20 35608841 35608941 -36544941 - MIR SINE MIR -6 256 149 1564 124 108 4 chr20 35609064 35609305 -36544577 + Tigger7 DNA MER2_type 2 267 -283 555 200 0 10 chr20 35609306 35609406 -36544476 + Tigger7 DNA MER2_type 2389 2487 0 25 31 0 0 chr20 35610324 35610356 -36543526 + AT_rich Low_complexity Low_complexity 1 32 0 1814 130 16 0 chr20 35610388 35610641 -36543241 + AluSq SINE Alu 4 260 -53 5329 77 6 1 chr20 35610641 35611314 -36542568 + THE1A-int LTR MaLR 905 1580 0 2327 77 6 37 chr20 35611314 35611641 -36542241 + THE1A LTR MaLR 1 317 -38 472 255 81 0 chr20 35611660 35611809 -36542073 + L1ME4a LINE L1 5959 6119 -2 1775 181 0 16 chr20 35612053 35612357 -36541525 + AluJo SINE Alu 1 299 -13 332 325 97 27 chr20 35613583 35613912 -36539970 + L2 LINE L2 2624 2975 -339 223 179 0 0 chr20 35614012 35614051 -36539831 - L2 LINE L2 -17 3255 3217 2409 66 33 0 chr20 35614083 35614384 -36539498 + AluY SINE Alu 1 311 0 283 288 0 54 chr20 35614461 35614572 -36539310 - MIR SINE MIR -79 183 79 272 301 71 9 chr20 35614627 35614740 -36539142 + L2 LINE L2 3116 3235 -37 189 147 0 0 chr20 35614743 35614777 -36539105 + (TGAA)n Simple_repeat Simple_repeat 4 37 0 226 260 115 0 chr20 35615315 35615411 -36538471 - L2 LINE L2 -12 3260 3154 729 231 53 6 chr20 35615618 35615787 -36538095 + L1ME3A LINE L1 5993 6169 -1 2396 89 0 0 chr20 35615790 35616094 -36537788 + AluSg SINE Alu 1 304 -6 864 247 60 49 chr20 35616944 35617189 -36536693 - MIR SINE MIR -13 249 6 255 294 191 0 chr20 35617268 35617404 -36536478 - MIR SINE MIR -48 214 53 550 165 46 18 chr20 35617626 35617735 -36536147 - FRAM SINE Alu -7 169 58 574 291 6 22 chr20 35617814 35617993 -36535889 - MIR SINE MIR -72 190 15 2431 85 13 0 chr20 35618643 35618950 -36534932 + AluSp SINE Alu 1 311 -2 737 194 0 0 chr20 35619078 35619202 -36534680 + FLAM_C SINE Alu 2 125 -18 506 145 0 0 chr20 35619213 35619296 -36534586 + AluS SINE Alu 227 309 0 889 157 0 90 chr20 35619321 35619499 -36534383 + FRAM SINE Alu 5 166 -10 209 108 27 0 chr20 35619499 35619536 -36534346 + (TA)n Simple_repeat Simple_repeat 1 38 0 21 0 0 0 chr20 35619578 35619599 -36534283 + AT_rich Low_complexity Low_complexity 1 21 0 534 240 82 25 chr20 35619603 35619799 -36534083 - L1ME LINE L1 -313 5808 5602 21 36 0 0 chr20 35619821 35619849 -36534033 + AT_rich Low_complexity Low_complexity 1 28 0 2500 67 0 3 chr20 35619857 35620157 -36533725 - AluSq SINE Alu -14 299 1 242 274 44 93 chr20 35620189 35620415 -36533467 - L1ME LINE L1 -560 5561 5347 32 0 0 0 chr20 35620460 35620492 -36533390 + AT_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr20 35620848 35620869 -36533013 + AT_rich Low_complexity Low_complexity 1 21 0 376 252 117 43 chr20 35621700 35621754 -36532128 + L1ME LINE L1 5521 5570 -551 759 187 0 8 chr20 35621754 35621888 -36531994 + FLAM_C SINE Alu 1 133 0 376 252 117 43 chr20 35621888 35622115 -36531767 + L1ME LINE L1 5570 5823 -298 2157 123 7 0 chr20 35622124 35622408 -36531474 + AluSx SINE Alu 3 288 -24 369 228 107 99 chr20 35622443 35622572 -36531310 + MLT1G1 LTR MaLR 1 127 -422 2161 116 0 26 chr20 35622572 35622875 -36531007 - AluSg1 SINE Alu -14 295 1 369 228 107 99 chr20 35622875 35623254 -36530628 + MLT1G1 LTR MaLR 127 549 0 3462 262 73 93 chr20 35623324 35624199 -36529683 + HAL1 LINE L1 2 893 -1614 1888 141 43 10 chr20 35624199 35624498 -36529384 - AluJo SINE Alu -3 309 1 3462 262 73 93 chr20 35624498 35625100 -36528782 + HAL1 LINE L1 893 1506 -1001 1518 82 0 82 chr20 35625100 35625276 -36528606 - AluY SINE Alu -5 306 152 576 0 0 0 chr20 35625276 35625340 -36528542 + (TA)n Simple_repeat Simple_repeat 2 65 0 1518 82 0 82 chr20 35625340 35625395 -36528487 - AluY SINE Alu -159 152 94 1938 163 0 3 chr20 35625395 35625694 -36528188 - AluJo SINE Alu -12 300 1 3462 262 73 93 chr20 35625694 35625926 -36527956 + HAL1 LINE L1 1505 1740 -767 2361 89 3 0 chr20 35625926 35626218 -36527664 - AluSg1 SINE Alu -16 293 1 3462 262 73 93 chr20 35626218 35626735 -36527147 + HAL1 LINE L1 1740 2266 -241 1707 184 7 10 chr20 35626735 35627056 -36526826 + AluJb SINE Alu 1 312 0 3462 262 73 93 chr20 35627056 35627124 -36526758 + HAL1 LINE L1 2266 2334 -173 2089 115 14 10 chr20 35627124 35627420 -36526462 - AluSx SINE Alu -15 297 1 3462 262 73 93 chr20 35627420 35627625 -36526257 + HAL1 LINE L1 2334 2457 -50 1949 160 0 13 chr20 35627625 35627925 -36525957 - AluJo SINE Alu -16 296 1 3462 262 73 93 chr20 35627925 35627949 -36525933 + HAL1 LINE L1 2457 2480 -27 183 292 31 0 chr20 35628499 35628564 -36525318 - MIR SINE MIR -73 189 123 2332 100 3 0 chr20 35629147 35629458 -36524424 + AluSp SINE Alu 1 312 -1 1851 155 6 43 chr20 35629460 35629782 -36524100 + AluJb SINE Alu 1 310 -2 2257 107 0 3 chr20 35629814 35630112 -36523770 + AluSx SINE Alu 1 297 -15 194 393 56 9 chr20 35630644 35630751 -36523131 + L3 LINE CR1 1455 1566 -11 496 278 134 73 chr20 35631586 35632080 -36521802 + L2 LINE L2 2751 3272 0 2544 64 0 0 chr20 35632673 35632969 -36520913 + AluY SINE Alu 1 296 -15 21 57 0 0 chr20 35633192 35633227 -36520655 + AT_rich Low_complexity Low_complexity 1 35 0 357 125 0 0 chr20 35634034 35634090 -36519792 + (CA)n Simple_repeat Simple_repeat 2 57 0 24 53 0 0 chr20 35634304 35634342 -36519540 + AT_rich Low_complexity Low_complexity 1 38 0 2085 85 3 79 chr20 35634454 35634770 -36519112 - AluSg SINE Alu -18 292 1 1358 149 0 19 chr20 35635772 35635986 -36517896 - AluJb SINE Alu -21 291 82 387 124 0 34 chr20 35636178 35636267 -36517615 + (TA)n Simple_repeat Simple_repeat 2 87 0 1211 144 0 50 chr20 35636298 35636500 -36517382 - AluSg/x SINE Alu -9 303 112 198 0 0 0 chr20 35637354 35637376 -36516506 + (A)n Simple_repeat Simple_repeat 1 22 0 232 214 14 71 chr20 35638072 35638142 -36515740 + L2 LINE L2 3236 3301 -12 743 203 0 0 chr20 35638626 35638759 -36515123 + FLAM_A SINE Alu 1 133 0 22 56 0 0 chr20 35638778 35638814 -36515068 + AT_rich Low_complexity Low_complexity 1 36 0 2298 67 0 7 chr20 35639167 35639483 -36514399 + AluY SINE Alu 1 314 0 685 267 40 30 chr20 35639610 35639913 -36513969 - L1MCc LINE L1 -2512 4429 4124 648 180 74 42 chr20 35639892 35639973 -36513909 - L1MCc LINE L1 -3106 3835 3758 * 2224 104 0 0 chr20 35639973 35640262 -36513620 - AluSx SINE Alu -23 289 1 648 180 74 42 chr20 35640262 35640369 -36513513 - L1MCc LINE L1 -3183 3758 3641 1302 134 4 77 chr20 35640369 35640545 -36513337 - AluSg SINE Alu 0 305 118 1660 122 115 14 chr20 35640545 35640824 -36513058 - AluSg1 SINE Alu -2 307 1 2298 83 21 0 chr20 35640825 35641113 -36512769 - AluSg SINE Alu -16 294 1 1302 134 4 77 chr20 35641113 35641219 -36512663 - AluSg SINE Alu -186 119 40 1324 278 77 15 chr20 35641231 35641521 -36512361 - L1MCc LINE L1 -3316 3625 3354 1944 167 0 7 chr20 35641521 35641827 -36512055 + AluJb SINE Alu 1 304 -8 1324 278 77 15 chr20 35641827 35642083 -36511799 - L1MCc LINE L1 -3587 3354 3045 2003 166 0 13 chr20 35642089 35642402 -36511480 - AluJb SINE Alu -3 309 1 198 103 0 0 chr20 35642409 35642438 -36511444 + (ATTG)n Simple_repeat Simple_repeat 2 30 0 2237 86 4 0 chr20 35642440 35642720 -36511162 - AluY SINE Alu -30 281 1 389 268 47 74 chr20 35642751 35643077 -36510805 - L1MCc LINE L1 -4900 1523 1190 2299 93 0 45 chr20 35643077 35643388 -36510494 - AluSx SINE Alu -15 297 1 389 268 47 74 chr20 35643388 35643399 -36510483 - L1MCc LINE L1 -5233 1190 1180 2604 56 0 0 chr20 35643399 35643701 -36510181 - AluY SINE Alu -9 302 1 389 268 47 74 chr20 35643701 35643823 -36510059 - L1MCc LINE L1 -5243 1180 1056 1911 154 7 23 chr20 35643823 35644122 -36509760 - AluSx SINE Alu -18 294 1 389 268 47 74 chr20 35644122 35644255 -36509627 - L1MCc LINE L1 -5367 1056 1336 2342 119 0 0 chr20 35644255 35644567 -36509315 - AluSx SINE Alu 0 312 1 389 268 47 74 chr20 35644567 35644651 -36509231 - L1MCc LINE L1 -5086 1337 1252 229 175 13 182 chr20 35645036 35645190 -36508692 - L1MCc LINE L1 -5939 992 865 203 281 70 0 chr20 35645317 35645374 -36508508 + MIR SINE MIR 7 67 -195 964 139 42 24 chr20 35645384 35645549 -36508333 + AluJo SINE Alu 10 177 -135 1731 184 13 29 chr20 35645549 35645858 -36508024 - AluJb SINE Alu -8 304 1 343 241 60 0 chr20 35645859 35645942 -36507940 - L1MA10 LINE L1 -64 6270 6183 * 3341 207 67 8 chr20 35645938 35646528 -36507354 - L1M4 LINE L1 -2911 3235 2580 2211 109 14 0 chr20 35646528 35646822 -36507060 - AluSx SINE Alu -14 298 1 3341 207 67 8 chr20 35646822 35647067 -36506815 - L1M4 LINE L1 -3566 2580 2351 427 275 63 14 chr20 35647069 35647211 -36506671 + L2 LINE L2 3163 3311 -2 2391 77 0 0 chr20 35647413 35647710 -36506172 - AluY SINE Alu -14 297 1 2069 100 3 63 chr20 35647734 35648053 -36505829 + AluSx SINE Alu 1 300 -12 2383 88 0 0 chr20 35648278 35648574 -36505308 + AluSg SINE Alu 1 296 -14 1929 168 0 10 chr20 35648578 35648876 -36505006 + AluJo SINE Alu 1 295 -17 2271 98 0 10 chr20 35648947 35649244 -36504638 + AluY SINE Alu 5 298 -13 493 300 101 8 chr20 35649254 35649491 -36504391 - L2 LINE L2 -461 2853 2595 2274 114 0 0 chr20 35649519 35649825 -36504057 - AluSg SINE Alu -4 306 1 2602 60 0 0 chr20 35649834 35650135 -36503747 - AluY SINE Alu -10 301 1 1125 150 30 0 chr20 35650166 35650333 -36503549 + AluJb SINE Alu 127 298 -14 357 327 98 0 chr20 35650897 35651050 -36502832 - L3 LINE CR1 -73 1504 1337 409 265 117 65 chr20 35651157 35651481 -36502401 + L1ME4a LINE L1 5506 5846 -275 189 0 0 0 chr20 35651481 35651502 -36502380 + (TCTCCC)n Simple_repeat Simple_repeat 5 25 0 6285 73 18 22 chr20 35651505 35652624 -36501258 + SVA Other Other 1 866 -520 6887 63 14 42 chr20 35652641 35653622 -36500260 + SVA Other Other 433 1386 0 185 0 40 0 chr20 35653635 35653660 -36500222 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 735 174 28 28 chr20 35653661 35653839 -36500043 + L1MC4a LINE L1 7011 7188 -620 2324 105 0 0 chr20 35653864 35654159 -36499723 + AluSx SINE Alu 9 303 -9 1305 188 49 92 chr20 35654160 35654606 -36499276 + L1MD3 LINE L1 7569 7995 0 5318 110 7 38 chr20 35654758 35655625 -36498257 - L1PA15 LINE L1 -2 6163 5324 1968 141 0 56 chr20 35655637 35655943 -36497939 - AluJb SINE Alu -23 289 1 1874 126 8 0 chr20 35655950 35656212 -36497670 - AluSx SINE Alu -13 299 36 1813 172 10 3 chr20 35656461 35656758 -36497124 - AluJo SINE Alu -13 299 1 1504 163 4 4 chr20 35656820 35657059 -36496823 + AluJo SINE Alu 73 311 -1 1343 163 28 9 chr20 35657708 35657923 -36495959 - AluJo SINE Alu -10 302 84 1783 123 109 18 chr20 35657970 35658254 -36495628 + AluSg SINE Alu 1 310 0 1918 138 38 3 chr20 35658261 35658550 -36495332 + AluJo SINE Alu 1 299 -13 2147 111 7 29 chr20 35658577 35658746 -36495136 - AluSg SINE Alu -10 300 140 2893 10 0 0 chr20 35658746 35659056 -36494826 - AluY SINE Alu -1 310 1 2147 111 7 29 chr20 35659056 35659193 -36494689 - AluSg SINE Alu -170 140 1 2019 138 0 0 chr20 35659480 35659749 -36494133 + AluSx SINE Alu 24 292 -20 1485 151 56 53 chr20 35660064 35660238 -36493644 - AluJo SINE Alu 0 320 143 2729 42 0 6 chr20 35660238 35660551 -36493331 - AluY SINE Alu 0 311 1 1485 151 56 53 chr20 35660551 35660695 -36493187 - AluJo SINE Alu -177 143 1 4062 204 55 37 chr20 35660843 35661734 -36492148 + L1MC4a LINE L1 6639 7513 -295 2388 92 3 0 chr20 35661734 35662037 -36491845 + AluSx SINE Alu 1 304 -8 2199 112 3 0 chr20 35662042 35662362 -36491520 + AluY SINE Alu 1 311 0 4062 204 55 37 chr20 35662362 35662423 -36491459 + L1MC4a LINE L1 7516 7574 -234 1741 168 9 22 chr20 35662423 35662738 -36491144 - AluJo SINE Alu 0 312 2 4062 204 55 37 chr20 35662738 35662928 -36490954 + L1MC4a LINE L1 7574 7808 0 2318 124 0 0 chr20 35662943 35663250 -36490632 + AluSx SINE Alu 6 312 0 549 216 95 26 chr20 35663258 35663448 -36490434 + L1MC5 LINE L1 7323 7525 -436 312 243 110 59 chr20 35663554 35663690 -36490192 + L1ME3A LINE L1 5962 6104 -66 2151 119 7 23 chr20 35663746 35664048 -36489834 - AluSx SINE Alu -15 297 1 2081 134 0 13 chr20 35664098 35664396 -36489486 - AluJb SINE Alu -17 295 2 641 234 76 29 chr20 35664632 35664803 -36489079 + MIR SINE MIR 74 252 -10 2357 93 10 3 chr20 35664805 35665115 -36488767 - AluSp SINE Alu -1 312 1 2134 117 7 13 chr20 35665192 35665490 -36488392 + AluSq SINE Alu 1 296 -17 2029 125 0 26 chr20 35665490 35665794 -36488088 - AluJb SINE Alu -16 296 1 519 310 198 9 chr20 35665890 35666122 -36487760 + MLT1K LTR MaLR 11 286 -302 1880 161 10 16 chr20 35666124 35666434 -36487448 + AluJo SINE Alu 1 308 -4 2666 50 0 0 chr20 35666526 35666827 -36487055 + AluY SINE Alu 1 301 -10 257 317 62 55 chr20 35667279 35667326 -36486556 - MIR SINE MIR -116 146 101 2393 99 0 0 chr20 35667326 35667628 -36486254 + AluSg SINE Alu 1 302 -8 2189 117 3 0 chr20 35667632 35667923 -36485959 + AluSq SINE Alu 6 297 -16 257 317 62 55 chr20 35667923 35668015 -36485867 - MIR SINE MIR -163 99 1 231 262 233 0 chr20 35668095 35668198 -36485684 - L2 LINE L2 -3 3310 3184 1806 128 19 75 chr20 35668198 35668518 -36485364 + AluJb SINE Alu 1 302 -10 2353 106 3 0 chr20 35668520 35668823 -36485059 + AluSp SINE Alu 1 304 -9 455 261 37 22 chr20 35669052 35669186 -36484696 + MIR SINE MIR 68 203 -59 826 124 31 0 chr20 35669285 35669414 -36484468 + FLAM_C SINE Alu 1 133 0 585 191 92 13 chr20 35669439 35669591 -36484291 + L1ME3A LINE L1 6007 6170 0 200 254 0 16 chr20 35670315 35670378 -36483504 + C-rich Low_complexity Low_complexity 5 66 0 21 0 0 0 chr20 35670646 35670667 -36483215 + GC_rich Low_complexity Low_complexity 1 21 0 1949 64 112 54 chr20 35671018 35671313 -36482569 - AluSx SINE Alu 0 312 1 1273 87 123 10 chr20 35671320 35671515 -36482367 - AluJb SINE Alu -12 300 84 239 309 0 15 chr20 35671560 35671628 -36482254 - L2 LINE L2 -4 3309 3243 2304 89 0 16 chr20 35671742 35672046 -36481836 - AluSp SINE Alu -14 299 1 1225 214 80 8 chr20 35672053 35672404 -36481478 - MER63B DNA MER1_type -55 381 6 2282 129 0 0 chr20 35672496 35672807 -36481075 + AluSx SINE Alu 1 311 -1 505 273 203 1 chr20 35672849 35673187 -36480695 - L2 LINE L2 -233 3080 2690 245 318 13 60 chr20 35673168 35673319 -36480563 - L2 LINE L2 -17 3296 3153 * 418 19 0 0 chr20 35673330 35673383 -36480499 + AluY SINE Alu 246 298 -12 2156 145 3 0 chr20 35673419 35673730 -36480152 + AluJb SINE Alu 1 312 0 2400 90 6 6 chr20 35673732 35674044 -36479838 + AluSx SINE Alu 1 312 0 315 297 31 39 chr20 35674163 35674291 -36479591 - MIR SINE MIR -12 250 124 261 314 89 16 chr20 35674327 35674451 -36479431 + MIR SINE MIR 130 262 0 982 193 5 5 chr20 35674616 35674813 -36479069 + L1MB8 LINE L1 5004 5200 -946 2158 119 7 0 chr20 35674815 35675110 -36478772 + AluSx SINE Alu 2 298 -14 2201 127 0 13 chr20 35675116 35675430 -36478452 + AluSg SINE Alu 1 310 0 883 115 0 8 chr20 35675432 35675554 -36478328 + AluJb SINE Alu 13 133 -179 1845 157 6 48 chr20 35675559 35675872 -36478010 + AluJb SINE Alu 1 300 -12 3630 156 25 43 chr20 35675873 35676160 -36477722 + L1MB8 LINE L1 5207 5498 -680 2276 115 0 3 chr20 35676160 35676465 -36477417 + AluSx SINE Alu 1 304 -8 3630 156 25 43 chr20 35676465 35676901 -36476981 + L1MB8 LINE L1 5498 5917 -261 1734 170 7 20 chr20 35676901 35677032 -36476850 + AluJb SINE Alu 5 136 -176 2303 115 3 3 chr20 35677032 35677344 -36476538 + AluSx SINE Alu 1 312 0 1734 170 7 20 chr20 35677344 35677518 -36476364 + AluJb SINE Alu 136 306 -6 3630 156 25 43 chr20 35677518 35677634 -36476248 + L1MB8 LINE L1 5917 6034 -144 2195 108 3 14 chr20 35677634 35677931 -36475951 + AluSp SINE Alu 1 294 -19 866 105 0 45 chr20 35677965 35678098 -36475784 - FLAM_C SINE Alu 0 143 17 258 266 170 32 chr20 35678110 35678204 -36475678 + MER5A DNA MER1_type 59 165 -24 * 387 295 19 38 chr20 35678131 35678236 -36475646 - MER5A DNA MER1_type -83 106 4 987 197 48 10 chr20 35678296 35678535 -36475347 - MIR SINE MIR 0 262 11 501 80 0 0 chr20 35678553 35678628 -36475254 + (GGTTG)n Simple_repeat Simple_repeat 4 78 0 775 199 7 0 chr20 35679030 35679176 -36474706 + MER7C DNA MER2_type 1 147 -455 * 1220 120 0 10 chr20 35679144 35679336 -36474546 + MER7A DNA MER2_type 68 255 -91 417 307 90 53 chr20 35679348 35679862 -36474020 - L2 LINE L2 -69 3244 2688 2422 97 6 0 chr20 35679862 35680173 -36473709 + AluSq SINE Alu 1 313 0 1860 136 0 65 chr20 35680191 35680501 -36473381 + AluJb SINE Alu 1 290 -22 352 280 20 10 chr20 35680691 35680791 -36473091 - MIR SINE MIR -64 144 44 2462 72 3 0 chr20 35681270 35681563 -36472319 + AluSc SINE Alu 1 294 -15 273 98 0 0 chr20 35681582 35681623 -36472259 + (TGAA)n Simple_repeat Simple_repeat 1 41 0 199 295 16 0 chr20 35681630 35681691 -36472191 + L2 LINE L2 2724 2785 -529 700 89 0 0 chr20 35681694 35681784 -36472098 + AluSx SINE Alu 2 91 -222 287 304 45 9 chr20 35681882 35681994 -36471888 + L1MC4a LINE L1 5537 5652 -469 1545 117 10 0 chr20 35682033 35682239 -36471643 + AluSx SINE Alu 91 298 -12 1230 261 17 22 chr20 35682649 35683005 -36470877 - L1MEd LINE L1 -5491 628 275 295 208 170 19 chr20 35683033 35683139 -36470743 - L1MEd LINE L1 -5996 123 2 368 333 65 7 chr20 35683153 35683291 -36470591 + L2 LINE L2 3117 3262 -10 288 292 0 0 chr20 35683296 35683361 -36470521 - L3 LINE CR1 -109 1468 1404 527 295 148 17 chr20 35683574 35683811 -36470071 + L1MC/D LINE L1 5537 5804 -2004 2069 143 3 7 chr20 35683815 35684116 -36469766 - AluJb SINE Alu -12 300 1 2299 112 0 0 chr20 35684120 35684424 -36469458 - AluSq SINE Alu -8 305 2 2355 100 3 0 chr20 35684593 35684892 -36468990 - AluSx SINE Alu -12 300 1 588 246 113 8 chr20 35684948 35685196 -36468686 + L1MC4a LINE L1 5628 5901 -1907 2075 138 0 22 chr20 35685234 35685545 -36468337 - AluJb SINE Alu -4 308 5 2266 109 0 0 chr20 35685930 35686232 -36467650 - AluSc SINE Alu -7 302 1 252 0 0 0 chr20 35686232 35686260 -36467622 + (TTG)n Simple_repeat Simple_repeat 2 29 0 1577 184 42 35 chr20 35686318 35686628 -36467254 - AluJb SINE Alu 0 312 1 2212 107 0 23 chr20 35686667 35686967 -36466915 - AluSx SINE Alu -19 293 1 2535 54 3 0 chr20 35687364 35687660 -36466222 - AluY SINE Alu -14 297 1 1931 154 0 23 chr20 35688014 35688319 -36465563 + AluJo SINE Alu 1 298 -14 2083 101 63 3 chr20 35688319 35688606 -36465276 + AluY SINE Alu 1 304 -7 677 224 65 12 chr20 35688609 35688779 -36465103 + MIR SINE MIR 28 206 -56 807 113 0 9 chr20 35688779 35688894 -36464988 + FLAM_A SINE Alu 20 133 -9 1582 163 50 7 chr20 35688908 35689185 -36464697 + AluSx SINE Alu 23 311 -1 2520 36 10 20 chr20 35689187 35689491 -36464391 + AluY SINE Alu 1 301 -10 1727 153 60 4 chr20 35689769 35690050 -36463832 + AluJo SINE Alu 1 297 -15 708 160 0 0 chr20 35690056 35690162 -36463720 + FLAM_C SINE Alu 2 107 -36 570 98 0 0 chr20 35690162 35690244 -36463638 + (GA)n Simple_repeat Simple_repeat 1 82 0 758 175 0 29 chr20 35690271 35690408 -36463474 - AluJo SINE Alu -166 146 14 1214 255 40 40 chr20 35690412 35690785 -36463097 - MLT1E LTR MaLR 0 593 221 379 305 0 9 chr20 35690853 35690958 -36462924 + MIR SINE MIR 70 173 -89 2174 112 23 10 chr20 35691023 35691327 -36462555 - AluSx SINE Alu -4 308 1 842 92 46 23 chr20 35691947 35692077 -36461805 + FLAM_C SINE Alu 1 133 0 351 294 53 7 chr20 35692350 35692496 -36461386 - MIR3 SINE MIR -27 181 26 306 0 0 0 chr20 35692496 35692530 -36461352 + (CA)n Simple_repeat Simple_repeat 2 35 0 2037 125 44 0 chr20 35692583 35692879 -36461003 - AluSx SINE Alu -1 311 3 257 280 24 7 chr20 35693001 35693090 -36460792 + MIR SINE MIR 105 195 -13 2294 94 0 13 chr20 35693320 35693627 -36460255 - AluSx SINE Alu -9 303 1 1532 179 107 0 chr20 35693885 35694165 -36459717 - AluSx SINE Alu -2 310 1 430 219 0 88 chr20 35694257 35694371 -36459511 + MIR3 SINE MIR 81 184 -24 2701 46 0 0 chr20 35694677 35694983 -36458899 - AluY SINE Alu -5 306 1 360 295 120 73 chr20 35695030 35695270 -36458612 - L2 LINE L2 -25 3247 3020 1573 184 50 4 chr20 35695270 35695547 -36458335 - AluJo SINE Alu -22 290 1 360 295 120 73 chr20 35695547 35695890 -36457992 - L2 LINE L2 -252 3020 2637 2285 71 7 3 chr20 35696087 35696381 -36457501 + AluY SINE Alu 2 296 -15 403 214 214 8 chr20 35696615 35696746 -36457136 - MIR3 SINE MIR -7 201 44 675 217 116 16 chr20 35696794 35697011 -36456871 + MIR SINE MIR 15 257 -5 218 31 0 31 chr20 35697740 35697772 -36456110 + (GGGGA)n Simple_repeat Simple_repeat 2 32 0 24 0 0 0 chr20 35698149 35698173 -36455709 + GC_rich Low_complexity Low_complexity 1 24 0 229 310 28 0 chr20 35698667 35698738 -36455144 - MIR SINE MIR -62 146 74 269 293 50 36 chr20 35699471 35699611 -36454271 + MIR3 SINE MIR 8 149 -59 212 211 0 96 chr20 35699610 35699662 -36454220 + L2 LINE L2 3218 3264 -8 * 248 305 79 55 chr20 35699805 35699969 -36453913 + MIR3 SINE MIR 30 197 -11 968 241 36 5 chr20 35701116 35701340 -36452542 + MIR SINE MIR 2 232 -30 1552 105 149 0 chr20 35701356 35701614 -36452268 - AluSx SINE Alu -26 286 1 239 316 40 0 chr20 35701658 35701734 -36452148 + L2 LINE L2 2976 3054 -218 368 157 22 90 chr20 35701777 35701866 -36452016 - MIR SINE MIR 0 262 180 583 276 20 0 chr20 35701947 35702099 -36451783 - MIR SINE MIR -64 198 44 225 0 0 0 chr20 35702714 35702739 -36451143 + (TG)n Simple_repeat Simple_repeat 1 25 0 33 43 0 0 chr20 35702810 35702857 -36451025 + GC_rich Low_complexity Low_complexity 1 47 0 26 30 0 0 chr20 35703619 35703652 -36450230 + GC_rich Low_complexity Low_complexity 1 33 0 29 47 0 0 chr20 35706942 35706985 -36446897 + AT_rich Low_complexity Low_complexity 1 43 0 2162 76 24 0 chr20 35707599 35707888 -36445994 - AluSp SINE Alu -17 296 1 2013 109 13 10 chr20 35709488 35709790 -36444092 + AluSx SINE Alu 1 303 -9 1537 150 19 64 chr20 35710022 35710336 -36443546 + AluJo SINE Alu 1 300 -12 2155 117 3 0 chr20 35710722 35711029 -36442853 + AluSp SINE Alu 1 308 -5 233 291 0 25 chr20 35711832 35711911 -36441971 + L2 LINE L2 2329 2405 -909 1912 134 7 0 chr20 35712069 35712359 -36441523 - AluSx SINE Alu -20 292 1 1916 128 7 0 chr20 35712902 35713192 -36440690 + AluSx SINE Alu 1 292 -20 349 118 0 0 chr20 35713278 35713329 -36440553 + Alu SINE Alu 246 296 -6 357 176 9 148 chr20 35714542 35714650 -36439232 + MER21B LTR ERV1 1 83 -780 515 128 0 0 chr20 35714681 35714759 -36439123 + MER21B LTR ERV1 239 316 -547 261 0 0 0 chr20 35714792 35714821 -36439061 + (A)n Simple_repeat Simple_repeat 1 29 0 459 216 35 111 chr20 35714829 35715000 -36438882 + MER21B LTR ERV1 304 461 -402 1922 130 92 25 chr20 35715003 35715318 -36438564 - MER1B DNA MER1_type -1 336 1 1979 147 3 0 chr20 35715331 35715637 -36438245 + AluJo SINE Alu 5 311 -1 2186 120 0 0 chr20 35715652 35715982 -36437900 + AluSx SINE Alu 1 312 0 1582 157 8 8 chr20 35715990 35716257 -36437625 + AluJo SINE Alu 40 306 -6 1752 141 0 64 chr20 35716258 35716584 -36437298 + AluSx SINE Alu 2 306 -6 1844 161 45 24 chr20 35716596 35716931 -36436951 + MER21B LTR ERV1 470 811 -52 378 336 84 62 chr20 35718146 35718345 -36435537 + L2 LINE L2 2986 3194 -78 2243 101 0 0 chr20 35718345 35718642 -36435240 - AluSx SINE Alu -15 297 1 378 336 84 62 chr20 35718642 35718716 -36435166 + L2 LINE L2 3194 3265 -7 383 295 16 16 chr20 35718717 35718839 -36435043 - L2 LINE L2 -2 3311 3190 203 332 129 28 chr20 35718957 35719174 -36434708 - L2 LINE L2 -338 2976 2738 681 310 164 26 chr20 35719174 35719712 -36434170 - L2 LINE L2 -726 2588 1977 594 284 202 15 chr20 35719726 35720057 -36433825 - L2 LINE L2 -1715 1599 1207 2150 108 3 0 chr20 35720057 35720353 -36433529 + AluSx SINE Alu 1 297 -15 1002 170 12 0 chr20 35720364 35720529 -36433353 + FRAM SINE Alu 1 167 -9 2061 128 0 3 chr20 35721265 35721578 -36432304 - AluSx SINE Alu 0 312 1 243 308 11 11 chr20 35721861 35721952 -36431930 + L1ME4a LINE L1 5471 5561 -560 1130 177 79 0 chr20 35721952 35722155 -36431727 + MER20 DNA MER1_type 1 219 0 592 267 145 13 chr20 35722158 35722476 -36431406 + L1ME4a LINE L1 5612 5971 -150 2120 118 0 0 chr20 35722499 35722804 -36431078 - AluSx SINE Alu -7 305 1 337 247 51 95 chr20 35722850 35723008 -36430874 + L1ME4a LINE L1 5967 6117 -4 360 0 0 0 chr20 35723088 35723128 -36430754 + (CAAAA)n Simple_repeat Simple_repeat 4 43 0 211 306 22 142 chr20 35723137 35723320 -36430562 + L2 LINE L2 3022 3182 -90 1600 148 9 69 chr20 35723623 35723940 -36429942 - AluJo SINE Alu -14 298 1 1791 150 27 7 chr20 35724266 35724560 -36429322 - AluJb SINE Alu -12 300 1 2192 113 0 0 chr20 35724571 35724873 -36429009 - AluSx SINE Alu -10 302 1 774 242 56 60 chr20 35724920 35725172 -36428710 + MIR SINE MIR 10 260 -2 188 143 122 20 chr20 35725157 35725206 -36428676 + MIR SINE MIR 138 191 -71 * 1850 127 33 0 chr20 35725307 35725582 -36428300 + AluSx SINE Alu 7 290 -22 229 255 106 32 chr20 35726807 35726901 -36426981 + L2 LINE L2 3005 3105 -167 719 306 60 0 chr20 35726987 35727203 -36426679 + MIR SINE MIR 34 262 0 904 112 0 0 chr20 35727298 35727432 -36426450 + AluSc SINE Alu 174 307 -2 1922 114 35 0 chr20 35727628 35727917 -36425965 - AluSx SINE Alu -13 299 1 1403 175 61 11 chr20 35727919 35728199 -36425683 - AluJb SINE Alu -18 294 1 2016 96 17 3 chr20 35728209 35728501 -36425381 - AluSp SINE Alu -17 296 1 2243 94 7 0 chr20 35728917 35729226 -36424656 + AluY SINE Alu 1 311 0 224 300 69 46 chr20 35730714 35730844 -36423038 + L2 LINE L2 3181 3313 0 252 323 0 0 chr20 35730854 35730916 -36422966 - L2 LINE L2 0 3272 3211 1724 173 0 13 chr20 35731450 35731756 -36422126 - AluJb SINE Alu -10 302 1 383 329 63 29 chr20 35732223 35732430 -36421452 - MIR SINE MIR -29 233 20 686 299 88 13 chr20 35732776 35733006 -36420876 - MIR SINE MIR 0 262 16 218 328 17 0 chr20 35733224 35733282 -36420600 + MIR SINE MIR 88 146 -62 2112 106 3 0 chr20 35733423 35733716 -36420166 - AluSx SINE Alu -18 294 1 213 39 0 0 chr20 35736714 35736740 -36417142 + (CTG)n Simple_repeat Simple_repeat 1 26 0 341 191 0 127 chr20 35738670 35738796 -36415086 - MER102b DNA MER1_type 0 341 232 1745 144 41 17 chr20 35739806 35740098 -36413784 - AluJb SINE Alu -13 299 1 198 0 0 0 chr20 35740484 35740506 -36413376 + (A)n Simple_repeat Simple_repeat 1 22 0 518 269 37 8 chr20 35741427 35741561 -36412321 - MIR3 SINE MIR -11 197 60 26 0 0 0 chr20 35741743 35741769 -36412113 + AT_rich Low_complexity Low_complexity 1 26 0 933 204 159 28 chr20 35742538 35742890 -36410992 + L1MC5 LINE L1 7516 7913 -48 850 164 0 14 chr20 35744429 35744568 -36409314 + AluSc SINE Alu 144 282 -27 180 0 0 0 chr20 35744568 35744588 -36409294 + (TTAAA)n Simple_repeat Simple_repeat 3 22 0 2731 19 0 0 chr20 35744641 35744952 -36408930 + AluYb8 SINE Alu 1 311 -7 1744 128 80 0 chr20 35745421 35745709 -36408173 - AluSx SINE Alu -1 311 1 592 296 71 16 chr20 35745927 35746180 -36407702 - L2 LINE L2 0 3313 3047 1793 121 54 3 chr20 35746199 35746497 -36407385 + AluSq SINE Alu 1 313 0 2094 107 0 13 chr20 35746601 35746899 -36406983 - AluSx SINE Alu -18 294 1 2184 104 3 3 chr20 35746933 35747242 -36406640 + AluSg SINE Alu 2 310 0 781 209 105 38 chr20 35747837 35748047 -36405835 + MER58A DNA MER1_type 1 224 0 2290 93 0 3 chr20 35749276 35749589 -36404293 - AluSx SINE Alu 0 312 1 507 123 0 0 chr20 35751445 35751526 -36402356 + (CTG)n Simple_repeat Simple_repeat 1 81 0 575 257 47 0 chr20 35751948 35752096 -36401786 + MER103 DNA DNA 12 166 0 1582 140 29 76 chr20 35752578 35752892 -36400990 - AluJo SINE Alu -13 299 1 21 0 0 0 chr20 35752919 35752940 -36400942 + AT_rich Low_complexity Low_complexity 1 21 0 500 290 180 26 chr20 35753101 35753484 -36400398 - L1MC4a LINE L1 -1861 5947 5506 1927 150 3 3 chr20 35753548 35753841 -36400041 + AluJo SINE Alu 1 293 -19 1358 284 106 47 chr20 35754016 35754491 -36399391 - L1MC4a LINE L1 -2459 3687 3241 1588 94 0 5 chr20 35754491 35754694 -36399188 + AluSq SINE Alu 1 202 -111 1358 284 106 47 chr20 35754694 35755204 -36398678 - L1MC4a LINE L1 -2905 3241 2762 2309 109 0 0 chr20 35755204 35755506 -36398376 - AluSg SINE Alu -8 302 1 1358 284 106 47 chr20 35755506 35755979 -36397903 - L1MC4a LINE L1 -3384 2762 2143 992 257 97 56 chr20 35756285 35757064 -36396818 - L1MEd LINE L1 -745 1745 830 237 301 11 32 chr20 35757085 35757178 -36396704 - L1MEd LINE L1 -5408 711 621 489 298 140 14 chr20 35757322 35757607 -36396275 - L1MEd LINE L1 -5677 442 122 2434 77 0 0 chr20 35757639 35757939 -36395943 - AluY SINE Alu -11 300 1 2129 98 31 0 chr20 35757964 35758251 -36395631 + AluSx SINE Alu 1 296 -16 1923 142 6 29 chr20 35758384 35758695 -36395187 + AluSx SINE Alu 1 304 -8 2068 72 76 34 chr20 35758723 35759014 -36394868 + AluY SINE Alu 1 303 -8 244 316 44 44 chr20 35759022 35759136 -36394746 + L3 LINE CR1 1420 1533 -44 1321 160 9 14 chr20 35759140 35759352 -36394530 + MER20 DNA MER1_type 5 215 -4 1134 135 65 25 chr20 35759882 35760006 -36393876 + AluJb SINE Alu 1 137 -175 183 42 0 0 chr20 35760006 35760030 -36393852 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1134 135 65 25 chr20 35760030 35760105 -36393777 + AluJb SINE Alu 137 208 -104 217 296 0 0 chr20 35760331 35760375 -36393507 - MIR SINE MIR -140 68 25 294 299 84 0 chr20 35760698 35760805 -36393077 - MIR SINE MIR -99 163 48 2250 107 3 0 chr20 35760849 35761148 -36392734 - AluSx SINE Alu -12 300 1 330 254 132 35 chr20 35761335 35761449 -36392433 + MIR SINE MIR 16 140 -68 282 324 108 0 chr20 35761681 35761792 -36392090 + L2 LINE L2 3143 3265 -7 197 33 33 0 chr20 35762443 35762473 -36391409 + (TG)n Simple_repeat Simple_repeat 2 32 0 896 191 0 12 chr20 35762749 35762911 -36390971 - FRAM SINE Alu -18 158 1 2383 91 0 0 chr20 35762920 35763216 -36390666 - AluSx SINE Alu -16 296 1 2167 89 46 0 chr20 35763597 35763877 -36390005 - AluSc SINE Alu -16 293 1 588 270 35 77 chr20 35764119 35764185 -36389697 + L2 LINE L2 2712 2779 -534 2228 104 3 0 chr20 35764185 35764482 -36389400 - AluSx SINE Alu -14 298 1 588 270 35 77 chr20 35764482 35764531 -36389351 + L2 LINE L2 2779 2829 -484 1201 175 86 60 chr20 35764531 35764682 -36389200 - MER33 DNA MER1_type -2262 323 177 1753 144 0 56 chr20 35764682 35764987 -36388895 - AluJo SINE Alu -24 288 1 1201 175 86 60 chr20 35764987 35765149 -36388733 - MER33 DNA MER1_type -2408 177 2 588 270 35 77 chr20 35765149 35765399 -36388483 + L2 LINE L2 2829 3067 -246 317 189 32 147 chr20 35765530 35765595 -36388287 - MER94 DNA DNA -41 93 41 1679 171 49 11 chr20 35765595 35765881 -36388001 + AluJb SINE Alu 1 297 -15 317 189 32 147 chr20 35765881 35765910 -36387972 - MER94 DNA DNA -93 41 10 232 273 0 18 chr20 35765936 35765991 -36387891 + L2 LINE L2 3257 3310 -3 1070 216 9 9 chr20 35766591 35766809 -36387073 + MER58A DNA MER1_type 2 219 -5 650 137 0 0 chr20 35767001 35767096 -36386786 - AluSp/q SINE Alu -7 306 212 2023 117 4 0 chr20 35767102 35767376 -36386506 - AluSx SINE Alu -37 275 1 338 305 101 73 chr20 35768497 35768858 -36385024 - L2 LINE L2 -181 3091 2725 258 81 0 0 chr20 35768858 35768895 -36384987 + (TG)n Simple_repeat Simple_repeat 1 37 0 338 305 101 73 chr20 35768895 35768957 -36384925 - L2 LINE L2 -547 2725 2666 2115 96 68 0 chr20 35768963 35769255 -36384627 + AluSx SINE Alu 1 312 0 720 211 16 0 chr20 35769382 35769510 -36384372 + FLAM_A SINE Alu 1 130 -3 562 318 61 0 chr20 35770121 35770319 -36383563 + MIR SINE MIR 21 230 -32 2262 104 0 0 chr20 35770402 35770691 -36383191 + AluSg SINE Alu 14 302 -8 3799 153 41 83 chr20 35770698 35770877 -36383005 + L1MB3 LINE L1 5342 5527 -656 2174 105 0 29 chr20 35770877 35771183 -36382699 + AluSx SINE Alu 2 298 -14 3799 153 41 83 chr20 35771183 35771476 -36382406 + L1MB3 LINE L1 5527 5831 -352 2190 86 14 0 chr20 35771476 35771754 -36382128 - AluSc SINE Alu -27 282 1 3799 153 41 83 chr20 35771754 35771984 -36381898 + L1MB3 LINE L1 5831 6069 -114 2434 78 0 0 chr20 35771984 35772278 -36381604 - AluSc SINE Alu -15 294 1 3799 153 41 83 chr20 35772278 35772312 -36381570 + L1MB3 LINE L1 6069 6103 -80 1908 49 0 4 chr20 35772312 35772537 -36381345 + AluY SINE Alu 84 307 -4 3799 153 41 83 chr20 35772537 35772674 -36381208 + L1MB3 LINE L1 6103 6181 -2 2008 152 0 10 chr20 35772781 35773091 -36380791 + AluJb SINE Alu 1 307 -5 496 269 90 19 chr20 35773432 35773588 -36380294 - MIR3 SINE MIR -9 199 33 2189 102 27 0 chr20 35773904 35774198 -36379684 - AluSx SINE Alu -6 306 5 1961 164 0 3 chr20 35774201 35774506 -36379376 - AluJo SINE Alu -8 304 1 717 268 102 75 chr20 35774923 35775255 -36378627 - MER102b DNA MER1_type 0 341 1 349 267 30 0 chr20 35775297 35775398 -36378484 - MIR3 SINE MIR 0 208 105 28 48 0 0 chr20 35776032 35776074 -36377808 + AT_rich Low_complexity Low_complexity 1 42 0 2116 120 3 3 chr20 35776552 35776844 -36377038 + AluSx SINE Alu 1 292 -20 189 0 0 0 chr20 35777175 35777196 -36376686 + (ATTG)n Simple_repeat Simple_repeat 4 24 0 1817 144 4 4 chr20 35777196 35777466 -36376416 - AluSx SINE Alu -32 280 11 1829 169 20 10 chr20 35777776 35778078 -36375804 - AluJb SINE Alu -7 305 1 1373 188 8 4 chr20 35778099 35778349 -36375533 + AluJo SINE Alu 49 299 -13 2323 115 0 0 chr20 35778351 35778664 -36375218 + AluSq SINE Alu 1 313 0 710 144 22 72 chr20 35778867 35779006 -36374876 + FLAM_C SINE Alu 2 133 0 4116 143 16 28 chr20 35779519 35780273 -36373609 - L1P LINE L1 -2630 3516 2772 2743 123 16 5 chr20 35780277 35780708 -36373174 + L1P LINE L1 4892 5327 -819 315 234 13 13 chr20 35780713 35780790 -36373092 + L2 LINE L2 2634 2710 -604 1744 189 0 10 chr20 35780794 35781095 -36372787 + AluJb SINE Alu 1 298 -14 1014 167 50 22 chr20 35781197 35781419 -36372463 - MER66A LTR ERV1 0 478 251 1719 150 4 4 chr20 35781420 35781680 -36372202 - AluSx SINE Alu -13 299 40 390 109 0 31 chr20 35781727 35781791 -36372091 - Alu SINE Alu -3 298 237 1029 73 0 0 chr20 35781792 35781916 -36371966 - AluSq/x SINE Alu -189 124 1 1609 162 11 8 chr20 35781916 35782181 -36371701 - MER66B LTR ERV1 -220 266 1 2077 73 23 0 chr20 35782236 35782519 -36371363 + AluSp SINE Alu 21 309 0 1520 178 0 64 chr20 35783043 35783357 -36370525 + AluJb SINE Alu 1 294 -18 891 119 8 15 chr20 35783505 35783639 -36370243 + AluSq/x SINE Alu 1 133 -179 2563 157 31 38 chr20 35783662 35783884 -36369998 + L1MB5 LINE L1 5688 5910 -264 2173 99 0 3 chr20 35783884 35784207 -36369675 - AluY SINE Alu 0 322 1 2147 111 0 3 chr20 35784215 35784503 -36369379 - AluSx SINE Alu -25 287 1 2563 157 31 38 chr20 35784503 35784748 -36369134 + L1MB5 LINE L1 5917 6162 -12 180 0 0 0 chr20 35786125 35786145 -36367737 + (CAA)n Simple_repeat Simple_repeat 2 21 0 2132 118 7 16 chr20 35786329 35786635 -36367247 - AluJb SINE Alu -9 303 1 914 193 0 0 chr20 35787034 35787184 -36366698 + FRAM SINE Alu 6 155 -21 1707 225 104 52 chr20 35787428 35787692 -36366190 + L1MC4a LINE L1 5314 5563 -2245 985 234 0 0 chr20 35787692 35787859 -36366023 + FAM SINE Alu 1 167 -8 1707 225 104 52 chr20 35787859 35788274 -36365608 + L1MC4a LINE L1 5563 6029 -1779 660 218 81 16 chr20 35788267 35788478 -36365404 + L1MC4 LINE L1 6779 7002 -806 * 1405 249 72 96 chr20 35788611 35789556 -36364326 + L1MC4 LINE L1 7099 8022 -20 2163 124 7 3 chr20 35789556 35789862 -36364020 - AluJo SINE Alu -5 307 1 1405 249 72 96 chr20 35789862 35789883 -36363999 + L1MC4 LINE L1 8022 8042 0 1547 183 0 11 chr20 35789891 35790153 -36363729 + AluJb SINE Alu 3 261 -51 802 173 82 121 chr20 35790158 35790389 -36363493 + AluJo SINE Alu 76 297 -15 242 231 94 51 chr20 35790394 35790511 -36363371 + L1MC4a LINE L1 6043 6164 -1644 20177 128 34 64 chr20 35790686 35791158 -36362724 + L1M1 LINE L1 603 1088 -6477 1914 127 0 22 chr20 35791158 35791433 -36362449 + AluSx SINE Alu 1 269 -43 20177 128 34 64 chr20 35791433 35795235 -36358647 + L1M1 LINE L1 1088 4902 -2663 1341 101 22 6 chr20 35795235 35795438 -36358444 + AluSc SINE Alu 99 304 0 20177 128 34 64 chr20 35795438 35795735 -36358147 + L1M1 LINE L1 4902 5207 -2358 1064 95 7 0 chr20 35795737 35795874 -36358008 + AluSq/x SINE Alu 1 138 -175 2277 98 0 3 chr20 35795874 35796171 -36357711 + AluSc SINE Alu 3 298 -11 27 29 0 0 chr20 35796274 35796308 -36357574 + AT_rich Low_complexity Low_complexity 1 34 0 1540 150 60 50 chr20 35796362 35796662 -36357220 - AluJb SINE Alu -8 304 2 2055 148 3 0 chr20 35796738 35797048 -36356834 + AluSx SINE Alu 1 311 -1 292 246 0 0 chr20 35797197 35797266 -36356616 + L1ME LINE L1 5637 5705 -416 1791 121 60 11 chr20 35797269 35797551 -36356331 + AluSx SINE Alu 4 299 -13 1230 172 23 28 chr20 35797560 35797608 -36356274 + AluJb SINE Alu 86 133 -179 2034 125 4 0 chr20 35797608 35797887 -36355995 + AluSx SINE Alu 1 280 -32 216 0 0 0 chr20 35797887 35797911 -36355971 + (TAAA)n Simple_repeat Simple_repeat 4 27 0 1230 172 23 28 chr20 35797911 35798076 -36355806 + AluJb SINE Alu 131 299 -13 33 0 0 0 chr20 35798193 35798226 -36355656 + AT_rich Low_complexity Low_complexity 1 33 0 5612 127 60 34 chr20 35798260 35798596 -36355286 - L1MA5 LINE L1 -6 6294 5968 1820 171 7 13 chr20 35798596 35798895 -36354987 - AluSx SINE Alu -15 297 1 5612 127 60 34 chr20 35798895 35799238 -36354644 - L1MA5 LINE L1 -332 5968 5635 2117 113 3 23 chr20 35799238 35799538 -36354344 - AluSg SINE Alu -16 294 1 5612 127 60 34 chr20 35799538 35800483 -36353399 - L1MA5 LINE L1 -665 5635 4628 1454 234 57 30 chr20 35800491 35801035 -36352847 + MLT1E LTR MaLR 1 588 -5 2410 84 0 0 chr20 35801078 35801377 -36352505 - AluY SINE Alu -12 299 1 490 147 0 112 chr20 35801377 35801420 -36352462 - FLAM_A SINE Alu -169 142 96 2235 109 3 0 chr20 35801420 35801723 -36352159 + AluSx SINE Alu 1 304 -8 490 147 0 112 chr20 35801723 35801795 -36352087 - FLAM_A SINE Alu -215 96 40 672 170 21 103 chr20 35801964 35801989 -36351893 + MER5B DNA MER1_type 1 26 -152 2328 93 3 0 chr20 35801989 35802290 -36351592 - AluSp SINE Alu -11 302 1 672 170 21 103 chr20 35802290 35802458 -36351424 + MER5B DNA MER1_type 26 178 0 2018 110 7 3 chr20 35803237 35803527 -36350355 + AluSx SINE Alu 1 291 -21 262 185 148 0 chr20 35803637 35803718 -36350164 + L1ME3A LINE L1 6068 6160 -10 2258 57 40 3 chr20 35804096 35804394 -36349488 - AluY SINE Alu 0 311 3 278 297 60 76 chr20 35804529 35804714 -36349168 + MIR3 SINE MIR 6 187 -21 315 0 0 0 chr20 35804754 35804789 -36349093 + (TA)n Simple_repeat Simple_repeat 1 35 0 185 254 146 0 chr20 35805164 35805219 -36348663 - L2 LINE L2 0 3272 3210 2149 99 0 16 chr20 35805520 35805832 -36348050 + AluSc SINE Alu 1 307 -2 869 138 0 14 chr20 35806286 35806424 -36347458 + AluJo SINE Alu 1 136 -176 1927 129 3 16 chr20 35806425 35806734 -36347148 + AluSq SINE Alu 1 305 -8 2090 121 3 0 chr20 35806736 35807034 -36346848 + AluSq SINE Alu 1 299 -14 316 235 52 26 chr20 35807047 35807200 -36346682 + L1MC5 LINE L1 7603 7759 -202 529 276 161 43 chr20 35807425 35807601 -36346281 + L1ME4a LINE L1 5537 5691 -430 1977 127 0 43 chr20 35807601 35807925 -36345957 + AluSg SINE Alu 1 310 0 529 276 161 43 chr20 35807925 35808072 -36345810 + L1ME4a LINE L1 5691 5905 -216 2136 107 0 3 chr20 35808145 35808444 -36345438 - AluSx SINE Alu -14 298 1 1409 158 40 29 chr20 35808650 35808928 -36344954 + AluJo SINE Alu 1 281 -31 30 0 0 0 chr20 35808928 35808958 -36344924 + AT_rich Low_complexity Low_complexity 1 30 0 23 0 0 0 chr20 35809740 35809763 -36344119 + AT_rich Low_complexity Low_complexity 1 23 0 1347 134 82 52 chr20 35809789 35810058 -36343824 + MLT1C LTR MaLR 1 277 -190 1186 138 0 0 chr20 35810066 35810240 -36343642 - AluSx SINE Alu -126 186 13 793 145 0 0 chr20 35810240 35810384 -36343498 + AluSg/x SINE Alu 169 312 0 2035 118 0 34 chr20 35810391 35810714 -36343168 + AluSx SINE Alu 1 312 0 473 293 20 16 chr20 35811537 35811740 -36342142 + MIR SINE MIR 5 238 -24 865 211 12 6 chr20 35811741 35811902 -36341980 + AluJo SINE Alu 117 278 -34 216 0 0 0 chr20 35811912 35811936 -36341946 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 23 33 0 0 chr20 35811982 35812012 -36341870 + AT_rich Low_complexity Low_complexity 1 30 0 185 250 29 59 chr20 35812312 35812380 -36341502 + L2 LINE L2 3193 3258 -14 423 285 222 50 chr20 35812824 35813045 -36340837 - Charlie8 DNA MER1_type -2158 259 1 767 194 147 0 chr20 35813281 35813451 -36340431 - MIR SINE MIR -4 258 64 436 239 22 14 chr20 35813482 35813620 -36340262 + L1M4 LINE L1 4873 5011 -1135 1568 136 77 4 chr20 35813667 35813940 -36339942 + AluJb SINE Alu 1 293 -19 455 231 96 91 chr20 35813954 35814041 -36339841 + L1M4 LINE L1 5122 5207 -939 2203 113 0 0 chr20 35814041 35814342 -36339540 + AluSx SINE Alu 1 301 -11 455 231 96 91 chr20 35814342 35814462 -36339420 + L1M4 LINE L1 5207 5330 -816 986 217 60 28 chr20 35814714 35814931 -36338951 - MER58A DNA MER1_type 0 224 1 2485 55 0 0 chr20 35815130 35815437 -36338445 - AluY SINE Alu -2 309 3 200 376 76 42 chr20 35815597 35815927 -36337955 + L2 LINE L2 2545 2885 -429 524 335 62 77 chr20 35815956 35816281 -36337601 + L2 LINE L2 2951 3270 -2 1702 210 63 9 chr20 35816315 35816744 -36337138 + Charlie4a DNA MER1_type 3 454 -54 891 98 0 0 chr20 35816788 35816910 -36336972 + AluJb SINE Alu 1 122 -190 231 36 0 0 chr20 35816913 35816941 -36336941 + (GAAAA)n Simple_repeat Simple_repeat 3 30 0 1396 141 85 35 chr20 35817253 35817536 -36336346 - AluJb SINE Alu -15 297 1 237 203 128 83 chr20 35817859 35817992 -36335890 + MIR3 SINE MIR 54 192 -16 368 240 153 89 chr20 35818665 35818978 -36334904 + L1M2 LINE L1 798 1130 -5719 21 36 0 0 chr20 35819028 35819056 -36334826 + GC_rich Low_complexity Low_complexity 1 28 0 233 222 42 0 chr20 35819087 35819159 -36334723 + (TCCG)n Simple_repeat Simple_repeat 1 75 0 242 89 44 0 chr20 35819220 35819265 -36334617 + GA-rich Low_complexity Low_complexity 1 47 0 335 256 186 8 chr20 35819466 35819595 -36334287 + MIR SINE MIR 81 232 -30 4294 83 29 68 chr20 35819874 35820076 -36333806 - L1MA3 LINE L1 0 6305 6097 2211 86 0 13 chr20 35820076 35820390 -36333492 - AluSg SINE Alu 0 310 1 4294 83 29 68 chr20 35820390 35820577 -36333305 - L1MA3 LINE L1 -208 6097 5904 2071 114 3 0 chr20 35820577 35820874 -36333008 + AluSx SINE Alu 1 298 -14 4294 83 29 68 chr20 35820874 35821215 -36332667 - L1MA3 LINE L1 -401 5904 5603 238 229 42 0 chr20 35821237 35821285 -36332597 + MIR SINE MIR 104 153 -55 193 239 22 0 chr20 35821392 35821438 -36332444 - L2 LINE L2 -5 3308 3262 * 850 337 114 25 chr20 35821428 35821574 -36332308 + L2 LINE L2 2605 2737 -535 1740 164 7 10 chr20 35821574 35821707 -36332175 + AluJb SINE Alu 1 133 -179 1736 159 3 16 chr20 35821707 35822016 -36331866 + AluJb SINE Alu 1 305 -7 1740 164 7 10 chr20 35822016 35822180 -36331702 + AluJb SINE Alu 133 297 -15 850 337 114 25 chr20 35822180 35822216 -36331666 + L2 LINE L2 2737 2768 -504 2415 41 3 0 chr20 35822216 35822511 -36331371 + AluY SINE Alu 1 296 -15 850 337 114 25 chr20 35822511 35822941 -36330941 + L2 LINE L2 2768 3272 0 894 186 38 107 chr20 35823116 35823333 -36330549 - L1ME3 LINE L1 -6 6156 5962 2246 60 42 0 chr20 35823333 35823617 -36330265 - AluY SINE Alu -15 296 1 894 186 38 107 chr20 35823617 35823690 -36330192 - L1ME3 LINE L1 -200 5962 5886 1640 136 3 81 chr20 35823867 35823922 -36329960 + L1MB3 LINE L1 5270 5328 -846 1765 181 0 0 chr20 35823922 35824214 -36329668 + AluJo SINE Alu 1 292 -20 1640 136 3 81 chr20 35824214 35824365 -36329517 + L1MB3 LINE L1 5328 5489 -685 1863 143 0 3 chr20 35824365 35824658 -36329224 - AluSx SINE Alu -20 292 1 1640 136 3 81 chr20 35824658 35824747 -36329135 + L1MB3 LINE L1 5489 5538 -636 2102 114 7 0 chr20 35824747 35825054 -36328828 - AluSx SINE Alu -3 309 1 1640 136 3 81 chr20 35825054 35825120 -36328762 + L1MB3 LINE L1 5538 5608 -566 730 144 0 0 chr20 35825120 35825231 -36328651 + FLAM_A SINE Alu 16 126 -16 433 153 0 6 chr20 35825232 35825314 -36328568 + L1MB3 LINE L1 5598 5667 -501 916 207 5 45 chr20 35825320 35825542 -36328340 + AluJb SINE Alu 85 297 -15 3054 143 27 8 chr20 35825543 35826054 -36327828 + L1MB3 LINE L1 5653 6173 -10 372 235 0 102 chr20 35826292 35826390 -36327492 + MIR SINE MIR 1 88 -174 187 213 106 0 chr20 35826490 35826537 -36327345 + L2 LINE L2 3137 3188 -84 493 293 20 7 chr20 35826555 35826702 -36327180 + MIR SINE MIR 99 247 -15 230 278 0 0 chr20 35827131 35827185 -36326697 + CT-rich Low_complexity Low_complexity 1 54 0 2203 91 0 3 chr20 35827546 35827843 -36326039 - AluSq SINE Alu -17 296 1 431 184 58 11 chr20 35828049 35828136 -36325746 + MER91B DNA MER1_type 40 130 -60 287 274 123 19 chr20 35828135 35828233 -36325649 + MER91B DNA MER1_type 69 180 -10 * 1713 168 0 13 chr20 35828233 35828537 -36325345 + AluJb SINE Alu 1 300 -12 1640 195 174 66 chr20 35828730 35829031 -36324851 - L1ME3A LINE L1 -1 6169 5902 2121 120 0 0 chr20 35829031 35829331 -36324551 - AluJb SINE Alu -12 300 1 1640 195 174 66 chr20 35829331 35829406 -36324476 - L1ME3A LINE L1 -268 5902 5837 1949 112 0 14 chr20 35829406 35829722 -36324160 - AluSx SINE Alu 0 312 1 2315 80 0 3 chr20 35829727 35830026 -36323856 - AluSp SINE Alu -13 300 3 1640 195 174 66 chr20 35830026 35830174 -36323708 - L1ME3A LINE L1 -336 5834 5579 2144 122 0 0 chr20 35830206 35830517 -36323365 + AluSq SINE Alu 1 311 -2 3261 165 31 45 chr20 35830541 35830601 -36323281 - L1MB8 LINE L1 -6 6172 6113 1609 190 3 0 chr20 35830601 35830901 -36322981 + AluJb SINE Alu 1 301 -11 3261 165 31 45 chr20 35830901 35831549 -36322333 - L1MB8 LINE L1 -65 6113 5474 839 144 0 23 chr20 35831567 35831699 -36322183 + FLAM_C SINE Alu 7 135 -8 7901 200 54 34 chr20 35831734 35831866 -36322016 - L1MB8 LINE L1 -707 5473 5345 1969 146 0 0 chr20 35831866 35832161 -36321721 + AluJb SINE Alu 3 297 -15 1687 159 0 7 chr20 35832168 35832471 -36321411 - AluJb SINE Alu 0 301 1 7901 200 54 34 chr20 35832471 35833408 -36320474 - L1MB8 LINE L1 -840 5340 4423 1452 171 91 0 chr20 35833408 35833694 -36320188 - AluJb SINE Alu 0 312 1 7901 200 54 34 chr20 35833694 35834895 -36318987 - L1MB8 LINE L1 -1757 4423 3151 338 203 31 0 chr20 35834895 35834959 -36318923 + MLT1A2 LTR MaLR 309 374 0 321 280 110 42 chr20 35835042 35835310 -36318572 + L1MC4a LINE L1 5737 6030 -91 26 0 0 0 chr20 35835385 35835411 -36318471 + AT_rich Low_complexity Low_complexity 1 26 0 1775 162 3 3 chr20 35835416 35835718 -36318164 + AluJb SINE Alu 1 302 -10 463 232 6 22 chr20 35835719 35835900 -36317982 + GA-rich Low_complexity Low_complexity 3 180 0 229 206 15 15 chr20 35835958 35836026 -36317856 + GA-rich Low_complexity Low_complexity 3 70 0 486 279 61 7 chr20 35836026 35836173 -36317709 + MIR SINE MIR 20 174 -88 2272 30 0 4 chr20 35836275 35836566 -36317316 - AluY SINE Alu 0 306 17 2128 54 12 87 chr20 35836595 35836929 -36316953 + AluY SINE Alu 1 309 -2 870 198 0 47 chr20 35836930 35837102 -36316780 + MER58B DNA MER1_type 178 341 0 528 334 109 28 chr20 35837120 35837432 -36316450 + L2 LINE L2 2885 3237 -76 2345 82 10 0 chr20 35837432 35837738 -36316144 + AluSp SINE Alu 1 309 -4 528 334 109 28 chr20 35837738 35837820 -36316062 + L2 LINE L2 3237 3311 -2 775 231 29 12 chr20 35837906 35838079 -36315803 + MIR SINE MIR 15 190 -72 378 0 0 0 chr20 35838665 35838707 -36315175 + (CCA)n Simple_repeat Simple_repeat 3 44 0 647 258 124 13 chr20 35839079 35839312 -36314570 + MIR SINE MIR 4 262 0 1883 155 0 16 chr20 35839330 35839639 -36314243 + AluJb SINE Alu 1 304 -8 207 100 0 0 chr20 35839640 35839670 -36314212 + (GGGA)n Simple_repeat Simple_repeat 1 30 0 341 280 10 0 chr20 35839699 35839799 -36314083 + L2 LINE L2 2564 2664 -650 1302 242 60 65 chr20 35839799 35839849 -36314033 + L2 LINE L2 2624 2673 -640 2133 96 0 19 chr20 35839849 35840162 -36313720 - AluSp SINE Alu -6 307 1 1302 242 60 65 chr20 35840162 35840777 -36313105 + L2 LINE L2 2673 3312 -1 1210 240 95 43 chr20 35841064 35841362 -36312520 - MER113 DNA MER1_type? -75 446 118 2095 107 3 7 chr20 35841362 35841660 -36312222 + AluSx SINE Alu 1 297 -15 1210 240 95 43 chr20 35841660 35841782 -36312100 - MER113 DNA MER1_type? -403 118 4 363 325 117 0 chr20 35841786 35841974 -36311908 + L2 LINE L2 2882 3091 -181 193 208 57 38 chr20 35842036 35842089 -36311793 + L2 LINE L2 3214 3267 -5 447 256 58 29 chr20 35842224 35842361 -36311521 + MIR SINE MIR 14 154 -108 476 284 267 23 chr20 35842510 35842714 -36311168 + L2 LINE L2 2763 2916 -397 1367 173 47 53 chr20 35842714 35843015 -36310867 - AluJb SINE Alu -11 301 3 476 284 267 23 chr20 35843015 35843246 -36310636 + L2 LINE L2 2916 3312 -1 416 230 44 62 chr20 35843270 35843383 -36310499 - MIR SINE MIR -63 145 34 282 315 19 38 chr20 35843728 35843903 -36309979 - MIR SINE MIR -65 143 21 666 231 164 27 chr20 35843969 35844194 -36309688 + MIR SINE MIR 7 262 0 533 293 0 30 chr20 35844169 35844336 -36309546 - MIR SINE MIR -89 173 12 * 456 267 62 28 chr20 35845375 35845551 -36308331 - MIR3 SINE MIR -3 205 24 214 341 44 44 chr20 35846140 35846231 -36307651 + L2 LINE L2 3090 3180 -92 180 204 61 41 chr20 35846374 35846423 -36307459 + L2 LINE L2 3263 3312 -1 1957 135 17 0 chr20 35846501 35846797 -36307085 - AluSx SINE Alu -11 301 1 238 179 0 0 chr20 35846831 35846870 -36307012 + L2 LINE L2 3270 3308 -5 378 0 0 0 chr20 35846893 35846935 -36306947 + (TG)n Simple_repeat Simple_repeat 2 43 0 963 79 0 0 chr20 35847006 35847132 -36306750 + AluSg/x SINE Alu 175 300 -12 732 264 71 20 chr20 35847245 35847442 -36306440 - MIR SINE MIR -54 208 2 2277 93 0 0 chr20 35847489 35847789 -36306093 - AluSx SINE Alu -12 300 1 410 271 23 15 chr20 35848566 35848695 -36305187 - MIR3 SINE MIR -42 166 33 281 227 30 0 chr20 35848709 35848775 -36305107 - MIR SINE MIR -76 132 65 283 224 171 0 chr20 35848977 35849053 -36304829 - MIR SINE MIR -65 197 109 556 257 105 7 chr20 35849163 35849315 -36304567 - MIR SINE MIR -62 200 34 1747 155 14 0 chr20 35849324 35849342 -36304540 - AluJb SINE Alu -12 300 284 234 0 0 0 chr20 35849342 35849368 -36304514 + (TG)n Simple_repeat Simple_repeat 1 26 0 1747 155 14 0 chr20 35849368 35849645 -36304237 - AluJb SINE Alu -28 284 1 211 308 62 0 chr20 35850629 35850694 -36303188 - MIR SINE MIR -7 255 187 * 271 296 138 6 chr20 35850689 35850848 -36303034 + L2 LINE L2 2782 2961 -353 2121 109 7 7 chr20 35851168 35851470 -36302412 - AluJb SINE Alu -10 302 1 1107 247 67 51 chr20 35851571 35851944 -36301938 + MLT1K LTR MaLR 127 505 -83 340 235 74 12 chr20 35851944 35852025 -36301857 + L2 LINE L2 3185 3270 -2 233 222 74 83 chr20 35851996 35852104 -36301778 - MIR SINE MIR -37 225 119 * 2146 108 3 0 chr20 35852441 35852738 -36301144 + AluSx SINE Alu 1 298 -14 538 214 36 21 chr20 35852741 35852881 -36301001 - L1ME2 LINE L1 -118 6046 5905 183 80 0 0 chr20 35852897 35852922 -36300960 + (GGGA)n Simple_repeat Simple_repeat 4 28 0 1251 158 177 26 chr20 35854190 35854455 -36299427 - AluJo SINE Alu -5 307 3 874 249 75 60 chr20 35855633 35855966 -36297916 - MER102b DNA MER1_type -2 339 2 799 299 42 82 chr20 35857560 35857993 -36295889 - L2 LINE L2 -46 3267 2818 2132 117 0 0 chr20 35857993 35858293 -36295589 + AluSx SINE Alu 3 302 -10 799 299 42 82 chr20 35858293 35858377 -36295505 - L2 LINE L2 -495 2818 2732 2078 118 3 0 chr20 35858377 35858674 -36295208 - AluSq SINE Alu -15 298 1 799 299 42 82 chr20 35858674 35858726 -36295156 - L2 LINE L2 -581 2732 2717 1732 130 0 70 chr20 35858726 35859042 -36294840 - AluJb SINE Alu -18 294 1 799 299 42 82 chr20 35859042 35859121 -36294761 - L2 LINE L2 -596 2717 2636 202 277 101 34 chr20 35859131 35859250 -36294632 + MIR SINE MIR 71 197 -65 840 190 44 0 chr20 35859854 35860012 -36293870 + FAM SINE Alu 2 166 -9 2246 101 0 3 chr20 35860127 35860433 -36293449 - AluSx SINE Alu -7 305 1 327 49 0 0 chr20 35860616 35860657 -36293225 + (TTG)n Simple_repeat Simple_repeat 2 42 0 822 120 0 0 chr20 35860659 35860776 -36293106 - FLAM_C SINE Alu -25 118 2 469 259 123 29 chr20 35860813 35860983 -36292899 - MIR SINE MIR -6 256 71 1607 136 52 42 chr20 35860983 35861292 -36292590 + AluJo SINE Alu 1 312 0 1832 122 24 11 chr20 35861431 35861718 -36292164 - AluSx SINE Alu -21 291 1 257 230 81 27 chr20 35861834 35861908 -36291974 - L2 LINE L2 0 3313 3236 196 277 117 21 chr20 35861969 35862063 -36291819 - L2 LINE L2 -925 2389 2287 1293 246 97 27 chr20 35862193 35862596 -36291286 + MLT1K LTR MaLR 150 580 -8 231 255 0 0 chr20 35862600 35862647 -36291235 - L2 LINE L2 -1022 2292 2246 216 86 0 0 chr20 35862698 35862733 -36291149 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 1764 159 0 14 chr20 35862734 35863023 -36290859 - AluJb SINE Alu -26 286 2 454 339 76 26 chr20 35863093 35863474 -36290408 - L2 LINE L2 -656 2658 2259 180 118 118 0 chr20 35863976 35864010 -36289872 - L2 LINE L2 0 3313 3276 1722 113 92 24 chr20 35864031 35864323 -36289559 - AluSx SINE Alu 0 312 1 1960 98 84 0 chr20 35864334 35864620 -36289262 - AluSx SINE Alu -2 310 1 356 279 25 8 chr20 35864632 35864754 -36289128 - L2 LINE L2 -54 3259 3136 235 258 75 32 chr20 35864837 35864930 -36288952 - MIR SINE MIR -74 134 38 228 302 179 32 chr20 35865643 35865895 -36287987 - L3b LINE CR1 -28 1555 1267 400 302 126 13 chr20 35867034 35867193 -36286689 - MER5A DNA MER1_type -6 183 7 775 226 133 0 chr20 35867255 35867450 -36286432 + MIR SINE MIR 30 250 -12 189 0 0 0 chr20 35867451 35867472 -36286410 + (CAT)n Simple_repeat Simple_repeat 1 21 0 2264 102 0 6 chr20 35868839 35869152 -36284730 + AluSx SINE Alu 1 311 -1 256 352 69 25 chr20 35869236 35869395 -36284487 + MIR3 SINE MIR 36 201 -7 2467 64 0 3 chr20 35871088 35871401 -36282481 + AluSx SINE Alu 1 312 0 399 41 0 0 chr20 35871447 35871496 -36282386 + (TAGA)n Simple_repeat Simple_repeat 3 51 0 1527 174 0 10 chr20 35871496 35871789 -36282093 - AluJb SINE Alu -22 290 1 597 282 55 15 chr20 35871876 35872078 -36281804 + MIR SINE MIR 48 257 -5 330 261 14 0 chr20 35872140 35872209 -36281673 - MIR SINE MIR -187 75 6 269 327 61 72 chr20 35872279 35872445 -36281437 + L2 LINE L2 2622 2788 -526 2743 13 0 0 chr20 35872445 35872756 -36281126 - AluY SINE Alu 0 311 1 269 327 61 72 chr20 35872756 35872935 -36280947 + L2 LINE L2 2788 2963 -351 288 0 0 0 chr20 35873049 35873081 -36280801 + (CA)n Simple_repeat Simple_repeat 2 33 0 1051 141 6 0 chr20 35873137 35873300 -36280582 + AluSg/x SINE Alu 133 296 -14 443 284 114 40 chr20 35873415 35873591 -36280291 + MIR SINE MIR 74 262 0 437 282 50 82 chr20 35873598 35873814 -36280068 - L1ME LINE L1 -302 5819 5626 1236 164 69 79 chr20 35873814 35874119 -36279763 + AluJb SINE Alu 1 302 0 437 282 50 82 chr20 35874119 35874343 -36279539 - L1ME LINE L1 -495 5626 5396 263 274 88 35 chr20 35874445 35874558 -36279324 + MIR3 SINE MIR 83 201 -7 2084 113 3 35 chr20 35874570 35874888 -36278994 - AluSx SINE Alu -3 309 2 432 352 89 4 chr20 35874920 35875167 -36278715 + L2 LINE L2 2626 2893 -421 183 262 98 33 chr20 35875214 35875275 -36278607 + L2 LINE L2 2992 3056 -216 * 692 247 46 23 chr20 35875271 35875445 -36278437 + MIR SINE MIR 72 249 -13 510 176 12 0 chr20 35875635 35875720 -36278162 + FLAM_A SINE Alu 13 98 -44 272 222 19 0 chr20 35875721 35875775 -36278107 - L2 LINE L2 -11 3261 3207 2264 75 0 0 chr20 35875894 35876187 -36277695 + AluSg SINE Alu 1 293 -17 492 331 17 23 chr20 35876581 35876756 -36277126 - MIR SINE MIR -69 193 20 709 311 31 9 chr20 35876908 35877136 -36276746 - MIR SINE MIR -29 233 1 547 277 78 0 chr20 35877157 35877323 -36276559 - MIR SINE MIR -80 182 4 1520 156 10 63 chr20 35877478 35877809 -36276073 - AluJb SINE Alu 0 315 1 470 338 33 33 chr20 35877899 35878109 -36275773 + MIR SINE MIR 4 213 -49 854 117 0 71 chr20 35878329 35878470 -36275412 + FLAM_C SINE Alu 1 132 -180 1875 146 0 34 chr20 35878470 35878793 -36275089 + AluJb SINE Alu 1 312 0 854 117 0 71 chr20 35878793 35878805 -36275077 + FLAM_C SINE Alu 132 143 -169 286 135 0 58 chr20 35878981 35879033 -36274849 + MIR3 SINE MIR 112 160 -48 546 261 0 0 chr20 35879112 35879250 -36274632 - MER103 DNA DNA -15 151 14 208 302 48 16 chr20 35879316 35879379 -36274503 + L3 LINE CR1 1509 1573 -4 444 237 253 4 chr20 35879633 35879882 -36274000 - HAL1 LINE L1 -158 2349 2039 2000 126 0 17 chr20 35879889 35880190 -36273692 + AluSx SINE Alu 1 296 -16 566 299 23 17 chr20 35880631 35880805 -36273077 - MIR3 SINE MIR -3 205 31 194 245 0 41 chr20 35880959 35881008 -36272874 - L2 LINE L2 -92 3221 3175 2142 95 0 3 chr20 35881010 35881318 -36272564 + AluSq SINE Alu 1 307 0 2160 100 10 0 chr20 35881341 35881642 -36272240 + AluSx SINE Alu 1 304 -8 860 256 44 32 chr20 35881723 35881973 -36271909 + MIR SINE MIR 2 254 -8 1075 267 177 36 chr20 35882046 35882554 -36271328 - L2 LINE L2 0 3313 2743 601 78 0 0 chr20 35882557 35882634 -36271248 - AluSg SINE Alu -12 298 222 1076 80 0 68 chr20 35882634 35882666 -36271216 - AluSg SINE Alu -155 155 122 2265 91 0 0 chr20 35882666 35882974 -36270908 - AluY SINE Alu -3 308 1 1076 80 0 68 chr20 35882974 35883103 -36270779 - AluSg SINE Alu -188 122 5 1164 250 49 10 chr20 35883110 35883398 -36270484 - L2 LINE L2 -564 2750 2452 353 297 42 17 chr20 35884794 35884912 -36268970 + MIR3 SINE MIR 87 207 -1 218 31 0 31 chr20 35885025 35885057 -36268825 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 203 383 0 0 chr20 35885567 35885661 -36268221 + MIR3 SINE MIR 99 192 -16 239 209 90 0 chr20 35885934 35886001 -36267881 - L3 LINE CR1 -3 1574 1502 545 253 120 0 chr20 35886080 35886238 -36267644 + MIR SINE MIR 58 234 -28 403 256 314 16 chr20 35886486 35886677 -36267205 - L3 LINE CR1 -392 1185 938 261 179 51 0 chr20 35886698 35886776 -36267106 + CT-rich Low_complexity Low_complexity 4 85 0 760 205 0 0 chr20 35886780 35886907 -36266975 - FRAM SINE Alu -38 138 12 1940 129 0 44 chr20 35886921 35887239 -36266643 - AluSq SINE Alu -9 304 1 26 0 0 0 chr20 35887446 35887472 -36266410 + AT_rich Low_complexity Low_complexity 1 26 0 1800 153 3 3 chr20 35887761 35888068 -36265814 + AluSx SINE Alu 2 308 -4 884 153 53 0 chr20 35888068 35888218 -36265664 + AluJb SINE Alu 134 291 -21 180 261 65 0 chr20 35888399 35888439 -36265443 - L2 LINE L2 -2743 571 529 460 310 26 26 chr20 35888439 35888594 -36265288 + MER5B DNA MER1_type 1 155 -23 330 202 61 9 chr20 35888663 35888777 -36265105 - Charlie2a DNA MER1_type -33 2829 2710 640 228 53 0 chr20 35888811 35888982 -36264900 - Charlie2a DNA MER1_type -1212 1650 1471 495 194 28 69 chr20 35889018 35889162 -36264720 - Charlie2b DNA MER1_type -2089 693 556 * 853 208 121 0 chr20 35889159 35889366 -36264516 - Charlie2b DNA MER1_type -2469 313 82 395 392 28 0 chr20 35890117 35890260 -36263622 - L2 LINE L2 0 3272 3126 2053 86 55 0 chr20 35890314 35890606 -36263276 + AluSx SINE Alu 1 308 -4 297 257 76 0 chr20 35890645 35890750 -36263132 + L1M4 LINE L1 4498 4610 -1536 1979 133 30 66 chr20 35890757 35891081 -36262801 - L1MB8 LINE L1 -12 6166 5858 1965 107 7 58 chr20 35891081 35891391 -36262491 + AluSx SINE Alu 1 294 -18 1979 133 30 66 chr20 35891391 35891473 -36262409 - L1MB8 LINE L1 -320 5858 5775 1585 100 5 5 chr20 35891473 35891693 -36262189 - pTR5 LTR ERV1 -2047 391 172 362 255 10 0 chr20 35891696 35891794 -36262088 - LTR30 LTR ERV1 -80 642 544 5714 113 108 64 chr20 35891798 35892921 -36260961 - pTR5 LTR ERV1 -417 2021 742 600 111 0 0 chr20 35892936 35893026 -36260856 + (TTCC)n Simple_repeat Simple_repeat 3 92 0 2263 91 3 3 chr20 35893030 35893339 -36260543 - AluSg SINE Alu -1 309 1 2183 152 11 3 chr20 35893339 35893707 -36260175 - L1MB8 LINE L1 -403 5781 5411 1936 127 3 16 chr20 35893719 35894027 -36259855 - AluSx SINE Alu -8 304 1 765 215 55 0 chr20 35894520 35894683 -36259199 - MER3 DNA MER1_type 0 209 38 243 304 96 9 chr20 35894687 35894802 -36259080 + MIR3 SINE MIR 69 193 -15 733 178 31 0 chr20 35894818 35894947 -36258935 - FLAM_C SINE Alu 0 133 1 306 140 88 0 chr20 35895210 35895267 -36258615 - L3 LINE CR1 -1 1576 1515 210 302 81 35 chr20 35895253 35895339 -36258543 - MER5A DNA MER1_type -7 182 93 * 307 278 227 17 chr20 35895501 35895677 -36258205 - L3 LINE CR1 -107 1470 1258 816 254 120 90 chr20 35895679 35896248 -36257634 - L2 LINE L2 0 3313 2763 1690 166 0 23 chr20 35896248 35896264 -36257618 - AluJo SINE Alu -11 301 286 270 0 0 0 chr20 35896264 35896294 -36257588 + (TTAA)n Simple_repeat Simple_repeat 3 32 0 1690 166 0 23 chr20 35896294 35896585 -36257297 - AluJo SINE Alu -26 286 1 816 254 120 90 chr20 35896585 35896613 -36257269 - L2 LINE L2 -550 2763 2737 2083 121 10 0 chr20 35896613 35896910 -36256972 + AluSx SINE Alu 1 300 -12 816 254 120 90 chr20 35896910 35897042 -36256840 - L2 LINE L2 -576 2737 2562 210 325 40 8 chr20 35897043 35897169 -36256713 - L3 LINE CR1 -315 1262 1133 900 158 0 0 chr20 35897308 35897441 -36256441 + FLAM_A SINE Alu 1 133 0 277 270 174 17 chr20 35897493 35897608 -36256274 - L2 LINE L2 -1 3271 3139 912 269 87 26 chr20 35897796 35898189 -36255693 - L2 LINE L2 -244 3069 2654 552 263 44 89 chr20 35898430 35898458 -36255424 + Charlie8 DNA MER1_type 39 67 -2350 1376 196 19 42 chr20 35898458 35898769 -36255113 - AluJb SINE Alu -8 304 1 552 263 44 89 chr20 35898769 35898815 -36255067 + Charlie8 DNA MER1_type 67 113 -2304 2114 50 40 40 chr20 35898815 35899112 -36254770 - AluY SINE Alu -14 297 1 552 263 44 89 chr20 35899112 35899374 -36254508 + Charlie8 DNA MER1_type 113 361 -2056 198 324 110 83 chr20 35899478 35899606 -36254276 + MIR3 SINE MIR 46 180 -28 2382 70 0 0 chr20 35899606 35899905 -36253977 + AluY SINE Alu 1 299 -12 198 324 110 83 chr20 35899905 35899921 -36253961 + MIR3 SINE MIR 180 194 -14 180 0 0 0 chr20 35900093 35900113 -36253769 + (TG)n Simple_repeat Simple_repeat 2 21 0 537 231 25 103 chr20 35900169 35900253 -36253629 - L2 LINE L2 -21 3292 3203 2318 82 0 3 chr20 35900253 35900557 -36253325 + AluSx SINE Alu 1 303 -9 537 231 25 103 chr20 35900557 35900675 -36253207 - L2 LINE L2 -110 3203 3106 1775 135 11 0 chr20 35900678 35900952 -36252930 - AluSx SINE Alu -18 294 18 391 257 119 9 chr20 35901530 35901639 -36252243 + MIR SINE MIR 19 139 -69 708 260 135 3 chr20 35901806 35902092 -36251790 + L2 LINE L2 2761 3072 -241 401 265 256 19 chr20 35902104 35902132 -36251750 + L1MC4a LINE L1 5575 5595 -2213 2137 116 3 0 chr20 35902132 35902434 -36251448 + AluSq SINE Alu 1 303 -10 401 265 256 19 chr20 35902434 35902616 -36251266 + L1MC4a LINE L1 5595 5835 -1973 1540 165 0 67 chr20 35902621 35902948 -36250934 + AluJb SINE Alu 6 310 -2 238 284 0 0 chr20 35903076 35903150 -36250732 + L1MC4a LINE L1 5885 5958 -1850 2164 138 0 0 chr20 35903271 35903569 -36250313 - AluSx SINE Alu -14 298 1 883 148 0 0 chr20 35903572 35903700 -36250182 - AluSp/q SINE Alu -11 302 175 1803 152 14 30 chr20 35903921 35904217 -36249665 + AluJo SINE Alu 3 293 -19 1789 163 3 27 chr20 35904375 35904670 -36249212 - AluJb SINE Alu -12 300 13 880 223 10 39 chr20 35904670 35904739 -36249143 - AluJo SINE Alu -112 200 131 2389 110 0 0 chr20 35904739 35905040 -36248842 - AluSp SINE Alu -12 301 1 880 223 10 39 chr20 35905040 35905176 -36248706 - AluJo SINE Alu -181 131 1 436 279 60 60 chr20 35905203 35905365 -36248517 + L2 LINE L2 3080 3244 -69 2163 131 10 0 chr20 35905365 35905670 -36248212 - AluSx SINE Alu -4 308 1 436 279 60 60 chr20 35905670 35905740 -36248142 + L2 LINE L2 3243 3312 -1 2210 119 3 0 chr20 35905841 35906135 -36247747 - AluSg SINE Alu -15 295 1 331 282 129 32 chr20 35906171 35906295 -36247587 - MER5A DNA MER1_type -44 145 10 189 226 131 36 chr20 35909103 35909136 -36244746 - L2 LINE L2 -48 3224 3196 183 42 0 0 chr20 35909136 35909160 -36244722 + (GGA)n Simple_repeat Simple_repeat 3 26 0 189 226 131 36 chr20 35909160 35909210 -36244672 - L2 LINE L2 -76 3196 3133 377 308 19 0 chr20 35909419 35909523 -36244359 + MIR SINE MIR 49 154 -108 923 229 143 0 chr20 35909774 35909997 -36243885 + MIR SINE MIR 8 262 0 21 0 0 0 chr20 35910243 35910264 -36243618 + AT_rich Low_complexity Low_complexity 1 21 0 2280 109 0 25 chr20 35911289 35911609 -36242273 - AluSx SINE Alu 0 312 1 352 254 85 46 chr20 35911747 35911877 -36242005 - MIR SINE MIR -71 191 57 658 315 75 23 chr20 35912421 35912729 -36241153 - L2 LINE L2 -2 3311 2988 396 0 0 0 chr20 35913129 35913173 -36240709 + (TG)n Simple_repeat Simple_repeat 2 45 0 199 304 0 0 chr20 35913552 35913608 -36240274 - L3 LINE CR1 -193 1384 1329 573 255 67 59 chr20 35915724 35915874 -36238008 + MIR SINE MIR 5 159 -103 2277 112 0 0 chr20 35915874 35916169 -36237713 + AluSq SINE Alu 1 295 -18 573 255 67 59 chr20 35916169 35916273 -36237609 + MIR SINE MIR 159 261 -1 231 259 121 0 chr20 35916331 35916389 -36237493 - MIR SINE MIR -107 101 37 865 272 22 9 chr20 35916553 35916777 -36237105 - MIR SINE MIR -13 249 23 2136 137 46 60 chr20 35917060 35917476 -36236406 - MSTB LTR MaLR -16 410 1 1014 263 156 20 chr20 35917743 35918229 -36235653 - L2 LINE L2 0 3313 2736 2279 96 28 0 chr20 35918229 35918542 -36235340 - AluSg SINE Alu 0 310 1 1014 263 156 20 chr20 35918542 35918638 -36235244 - L2 LINE L2 -577 2736 2654 1761 227 107 14 chr20 35918640 35919125 -36234757 - MLT1F LTR MaLR -12 530 1 264 173 93 27 chr20 35919127 35919202 -36234680 - L2 LINE L2 -656 2658 2579 482 271 29 0 chr20 35919411 35919551 -36234331 + L3 LINE CR1 1051 1194 -383 812 275 61 9 chr20 35920013 35920242 -36233640 - MIR SINE MIR 0 262 22 282 266 21 43 chr20 35922812 35922906 -36230976 - MIR3 SINE MIR -116 92 1 704 308 167 47 chr20 35923336 35923538 -36230344 + L2 LINE L2 2018 2194 -1078 2520 75 0 0 chr20 35923538 35923833 -36230049 + AluSc SINE Alu 1 295 -14 704 308 167 47 chr20 35923833 35924575 -36229307 + L2 LINE L2 2194 3069 -203 189 333 18 0 chr20 35924544 35924601 -36229281 - L2 LINE L2 -82 3190 3133 * 738 229 58 131 chr20 35925970 35926379 -36227503 + L2 LINE L2 2776 3131 -182 2062 130 0 23 chr20 35926379 35926687 -36227195 - AluJb SINE Alu 0 312 12 738 229 58 131 chr20 35926687 35926848 -36227034 + L2 LINE L2 3131 3302 -11 260 385 0 0 chr20 35926851 35926968 -36226914 - L2 LINE L2 -230 3042 2926 193 213 100 62 chr20 35927302 35927382 -36226500 - MIR SINE MIR -117 145 63 2349 98 7 0 chr20 35927449 35927744 -36226138 + AluSq SINE Alu 1 297 -16 2489 87 0 0 chr20 35927829 35928129 -36225753 - AluSx SINE Alu -12 300 1 231 291 107 29 chr20 35928284 35928387 -36225495 - MIR3 SINE MIR -16 192 82 492 276 87 3 chr20 35928508 35928683 -36225199 + MIR SINE MIR 4 203 -59 252 265 0 0 chr20 35928814 35928863 -36225019 - MER63 DNA MER1_type 0 1062 1014 400 295 36 90 chr20 35930780 35931058 -36222824 + L1M4 LINE L1 4488 4750 -1396 2246 111 0 9 chr20 35931395 35931710 -36222172 - AluSx SINE Alu 0 312 1 403 271 0 112 chr20 35932339 35932509 -36221373 + MIR3 SINE MIR 1 151 -57 2345 107 3 0 chr20 35932511 35932810 -36221072 + AluSp SINE Alu 1 300 -13 357 284 158 7 chr20 35933046 35933184 -36220698 + MIR3 SINE MIR 2 156 -78 2366 94 3 3 chr20 35933215 35933522 -36220360 - AluSx SINE Alu -5 307 1 581 186 62 28 chr20 35933570 35933715 -36220167 - MIR SINE MIR -50 212 63 636 275 45 52 chr20 35934003 35934256 -36219626 + MIR SINE MIR 3 247 -15 2402 100 0 0 chr20 35934627 35934928 -36218954 + AluSg SINE Alu 1 301 -9 300 219 0 104 chr20 35935773 35935869 -36218013 + MIR3 SINE MIR 105 190 -18 760 271 79 0 chr20 35936691 35936920 -36216962 + MIR SINE MIR 4 250 -12 467 242 96 121 chr20 35936931 35937212 -36216670 - L3 LINE CR1 -163 1414 1141 217 328 140 38 chr20 35937174 35937360 -36216522 + L2 LINE L2 3025 3229 -84 * 2284 100 62 0 chr20 35938140 35938480 -36215402 - MER46B DNA MER2_type 0 236 1 206 61 0 30 chr20 35938549 35938572 -36215310 + (TA)n Simple_repeat Simple_repeat 2 25 -8 2428 86 0 7 chr20 35938572 35938875 -36215007 - AluSx SINE Alu -11 301 1 206 61 0 30 chr20 35938875 35938884 -36214998 + (TA)n Simple_repeat Simple_repeat 25 33 0 605 278 54 8 chr20 35939210 35939384 -36214498 - MIR3 SINE MIR -8 200 20 738 233 105 24 chr20 35939897 35940107 -36213775 - MIR SINE MIR -6 256 30 2251 126 0 0 chr20 35940647 35940940 -36212942 - AluSx SINE Alu -19 293 1 627 284 150 54 chr20 35940943 35941494 -36212388 - L1MC4a LINE L1 -139 5982 5567 1092 174 12 0 chr20 35941502 35941674 -36212208 - FAM SINE Alu -1 174 1 663 248 40 69 chr20 35942011 35942056 -36211826 - Charlie8 DNA MER1_type -2026 391 346 2546 68 0 0 chr20 35942056 35942352 -36211530 + AluSc SINE Alu 1 296 -13 663 248 40 69 chr20 35942352 35942653 -36211229 - Charlie8 DNA MER1_type -2071 346 55 817 225 197 24 chr20 35943147 35943360 -36210522 + MIR SINE MIR 8 257 -5 362 264 99 8 chr20 35943423 35943544 -36210338 + L2 LINE L2 3136 3267 -5 288 77 0 0 chr20 35943566 35943605 -36210277 + (CA)n Simple_repeat Simple_repeat 1 39 0 218 282 56 0 chr20 35943862 35943933 -36209949 - L2 LINE L2 -10 3262 3188 1950 132 0 14 chr20 35944035 35944316 -36209566 + AluSx SINE Alu 1 277 -35 28 29 0 0 chr20 35944459 35944494 -36209388 + AT_rich Low_complexity Low_complexity 1 35 0 383 321 70 37 chr20 35944528 35944930 -36208952 + L1ME4a LINE L1 5614 6032 -89 619 213 22 0 chr20 35944946 35945082 -36208800 - MIR SINE MIR -41 221 83 444 209 95 9 chr20 35945655 35945760 -36208122 - MIR SINE MIR -64 144 31 260 282 24 24 chr20 35945799 35945884 -36207998 + MIR3 SINE MIR 85 169 -39 * 358 254 65 87 chr20 35945876 35945986 -36207896 - MER5A DNA MER1_type -5 184 76 2212 110 3 3 chr20 35945986 35946286 -36207596 - AluY SINE Alu -11 300 1 358 254 65 87 chr20 35946286 35946313 -36207569 - MER5A DNA MER1_type -113 76 50 361 212 10 10 chr20 35947065 35947164 -36206718 + CT-rich Low_complexity Low_complexity 4 102 0 2371 48 37 3 chr20 35947165 35947459 -36206423 - AluY SINE Alu -7 304 1 258 203 0 31 chr20 35947576 35947640 -36206242 - MIR SINE MIR -97 111 50 202 333 62 0 chr20 35947727 35947808 -36206074 - L2 LINE L2 -1 3271 3186 2413 87 10 0 chr20 35947825 35948135 -36205747 + AluSp SINE Alu 1 313 0 191 276 320 33 chr20 35948165 35948527 -36205355 + L2 LINE L2 2145 2610 -704 215 311 27 0 chr20 35948568 35948642 -36205240 + L2 LINE L2 2905 2980 -292 190 299 62 41 chr20 35948731 35948828 -36205054 + L2 LINE L2 3172 3270 -2 219 296 2 0 chr20 35949605 35949678 -36204204 - MIR SINE MIR -73 135 62 198 290 48 0 chr20 35949706 35949768 -36204114 - MIR SINE MIR -114 94 30 1907 153 3 0 chr20 35950325 35950620 -36203262 + AluSx SINE Alu 1 296 -16 231 345 154 0 chr20 35950763 35950983 -36202899 - L2 LINE L2 -542 2772 2519 2462 88 0 3 chr20 35951037 35951342 -36202540 - AluSq SINE Alu -9 304 1 348 231 102 4 chr20 35951756 35951878 -36202004 - MIR SINE MIR -63 145 38 747 255 211 9 chr20 35951893 35952023 -36201859 + L2 LINE L2 2931 3034 -279 2426 89 0 0 chr20 35952023 35952316 -36201566 - AluSg SINE Alu -17 293 1 747 255 211 9 chr20 35952316 35952503 -36201379 + L2 LINE L2 3034 3312 -1 273 316 140 0 chr20 35952531 35952667 -36201215 - MIR SINE MIR -6 256 102 204 286 0 0 chr20 35952966 35953015 -36200867 + MIR SINE MIR 87 135 -73 2468 87 0 3 chr20 35953018 35953329 -36200553 - AluSg SINE Alu 0 310 1 474 312 48 11 chr20 35953363 35953552 -36200330 - MIR SINE MIR 0 262 67 2500 73 0 0 chr20 35953784 35954087 -36199795 - AluY SINE Alu -8 303 1 225 261 29 0 chr20 35954274 35954343 -36199539 + L2 LINE L2 3197 3267 -5 425 309 59 7 chr20 35954361 35954513 -36199369 - MIR SINE MIR -16 246 87 225 308 0 112 chr20 35954605 35954712 -36199170 - MIR3 SINE MIR -21 187 93 239 301 60 12 chr20 35954761 35954844 -36199038 + L2 LINE L2 3171 3257 -15 3767 136 54 30 chr20 35955037 35955503 -36198379 - L1MB7 LINE L1 -16 6168 5680 1796 137 25 3 chr20 35955503 35955787 -36198095 + AluJo SINE Alu 1 290 -22 3767 136 54 30 chr20 35955787 35955984 -36197898 - L1MB7 LINE L1 -504 5680 5489 596 150 10 0 chr20 35955984 35956084 -36197798 + MER2 DNA MER2_type 8 108 -237 235 262 10 19 chr20 35956076 35956179 -36197703 + MER2 DNA MER2_type 59 160 -185 * 1037 123 26 0 chr20 35956184 35956339 -36197543 - AluJo SINE Alu -12 300 142 2153 92 3 3 chr20 35956368 35956660 -36197222 + AluSx SINE Alu 1 292 -20 885 112 68 0 chr20 35956664 35956825 -36197057 + MER2 DNA MER2_type 174 345 0 1646 169 66 6 chr20 35956831 35957336 -36196546 - L1MB7 LINE L1 -700 5478 4944 447 264 112 63 chr20 35957353 35957842 -36196040 - L1ME3A LINE L1 -202 5968 5428 926 111 0 0 chr20 35958189 35958315 -36195567 + AluJo SINE Alu 1 126 -186 390 211 105 121 chr20 35958494 35958608 -36195274 - MIR SINE MIR 0 262 151 817 156 7 30 chr20 35958608 35958743 -36195139 - AluJo SINE Alu -169 133 2 390 211 105 121 chr20 35958743 35958818 -36195064 - MIR SINE MIR -111 151 76 503 327 135 15 chr20 35959142 35959497 -36194385 - L2 LINE L2 -126 3187 2791 1779 199 60 48 chr20 35959764 35960246 -36193636 + L1MD2 LINE L1 5723 6210 -149 336 138 31 0 chr20 35960258 35960323 -36193559 + L1MD2 LINE L1 6291 6357 -2 911 173 19 0 chr20 35960325 35960481 -36193401 + AluJo SINE Alu 130 288 -24 2252 98 0 0 chr20 35960501 35960798 -36193084 + AluSg SINE Alu 1 297 -13 658 255 13 0 chr20 35961621 35961774 -36192108 - MIR SINE MIR -66 196 42 193 299 65 0 chr20 35961773 35961850 -36192032 - L2 LINE L2 -31 3241 3160 * 538 273 80 16 chr20 35961854 35962041 -36191841 - MIR SINE MIR -1 261 63 326 309 8 79 chr20 35963008 35963093 -36190789 - L1MC4a LINE L1 -1836 5972 5897 2302 89 3 3 chr20 35963093 35963397 -36190485 - AluSx SINE Alu -8 304 1 326 309 8 79 chr20 35963397 35963437 -36190445 - L1MC4a LINE L1 -1911 5897 5856 674 296 100 12 chr20 35963437 35963677 -36190205 - MIR SINE MIR 0 262 2 288 258 124 0 chr20 35963753 35963842 -36190040 - L2 LINE L2 -25 3288 3189 198 103 0 0 chr20 35964289 35964318 -36189564 + (CAGCT)n Simple_repeat Simple_repeat 3 31 0 327 306 0 28 chr20 35964716 35964824 -36189058 + MIR3 SINE MIR 76 180 -28 350 295 109 43 chr20 35964835 35965045 -36188837 - L3b LINE CR1 -195 1388 1165 327 318 23 64 chr20 35965172 35965345 -36188537 + L2 LINE L2 2584 2749 -565 21 0 0 0 chr20 35965346 35965367 -36188515 + AT_rich Low_complexity Low_complexity 1 21 0 756 311 154 7 chr20 35965559 35966151 -36187731 + L2 LINE L2 2546 3225 -88 1624 174 0 27 chr20 35966188 35966487 -36187395 - AluJo SINE Alu -19 293 3 22 0 0 0 chr20 35966487 35966509 -36187373 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr20 35966588 35966609 -36187273 + AT_rich Low_complexity Low_complexity 1 21 0 628 144 10 0 chr20 35966727 35966824 -36187058 - AluJ/FLAM SINE Alu -214 98 1 206 226 0 129 chr20 35967028 35967090 -36186792 - L3b LINE CR1 0 1583 1530 391 336 84 46 chr20 35967107 35967306 -36186576 - L3 LINE CR1 -108 1469 1258 1806 132 0 40 chr20 35967306 35967478 -36186404 - AluSx SINE Alu -8 304 147 2388 76 0 7 chr20 35967478 35967779 -36186103 - AluSx SINE Alu -13 299 1 1806 132 0 40 chr20 35967779 35967902 -36185980 - AluSx SINE Alu -165 147 21 391 336 84 46 chr20 35967902 35967940 -36185942 - L3 LINE CR1 -319 1258 1223 353 269 142 22 chr20 35968353 35968487 -36185395 - L2 LINE L2 -1 3312 3163 396 216 72 0 chr20 35968517 35968628 -36185254 + L1ME3A LINE L1 5856 5974 -196 24 0 0 0 chr20 35968654 35968678 -36185204 + AT_rich Low_complexity Low_complexity 1 24 0 1531 183 63 0 chr20 35968761 35968926 -36184956 - AluSx SINE Alu -9 303 111 198 0 0 0 chr20 35968926 35968948 -36184934 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 1531 183 63 0 chr20 35968948 35969067 -36184815 - AluSx SINE Alu -201 111 1 390 200 0 0 chr20 35969104 35969179 -36184703 + L1ME2 LINE L1 5687 5761 -2047 2311 58 0 3 chr20 35969277 35969568 -36184314 - AluY SINE Alu -21 290 1 640 259 49 5 chr20 35969593 35969798 -36184084 - L1ME2 LINE L1 -16 6148 5935 330 292 70 11 chr20 35970384 35970569 -36183313 + L1ME2 LINE L1 5894 6089 -75 208 202 50 17 chr20 35970595 35970714 -36183168 + CT-rich Low_complexity Low_complexity 5 127 0 284 263 53 11 chr20 35970724 35970819 -36183063 + MIR3 SINE MIR 66 164 -44 228 261 58 58 chr20 35971852 35971921 -36181961 + MIR SINE MIR 117 185 -77 613 245 7 0 chr20 35972217 35972356 -36181526 + MER45A DNA AcHobo 38 177 -1 218 246 49 16 chr20 35972388 35972449 -36181433 - MIR SINE MIR -190 72 10 195 240 40 0 chr20 35972481 35972531 -36181351 + MIR3 SINE MIR 10 61 -147 307 242 117 17 chr20 35972596 35972716 -36181166 - MIR3 SINE MIR -27 181 50 213 264 11 73 chr20 35973379 35973557 -36180325 + (CGGGG)n Simple_repeat Simple_repeat 2 168 0 1952 100 43 4 chr20 35973827 35974107 -36179775 + AluSx SINE Alu 9 299 -13 2350 93 0 3 chr20 35975121 35975431 -36178451 + AluSx SINE Alu 1 309 -3 918 136 0 0 chr20 35975458 35975590 -36178292 + FLAM_C SINE Alu 1 132 -11 316 322 34 0 chr20 35975688 35975806 -36178076 + MIR SINE MIR 113 234 -28 217 310 0 0 chr20 35976139 35976197 -36177685 + T-rich Low_complexity Low_complexity 2 59 0 362 283 96 18 chr20 35976764 35976921 -36176961 - L1M4 LINE L1 -2849 3297 3115 180 0 0 0 chr20 35976921 35976941 -36176941 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 362 283 96 18 chr20 35976941 35976980 -36176902 - L1M4 LINE L1 -3031 3115 3080 195 129 0 0 chr20 35977467 35977498 -36176384 + (GGGAA)n Simple_repeat Simple_repeat 5 35 0 340 299 27 36 chr20 35977594 35977748 -36176134 + MIR SINE MIR 51 206 -56 283 289 18 44 chr20 35977799 35977913 -36175969 - L2 LINE L2 -159 3113 3003 421 280 12 0 chr20 35979311 35979479 -36174403 + (CA)n Simple_repeat Simple_repeat 2 171 0 323 350 55 51 chr20 35982199 35982359 -36171523 - L1ME4a LINE L1 0 6121 5958 2279 109 0 0 chr20 35982359 35982662 -36171220 - AluSx SINE Alu -9 303 1 323 350 55 51 chr20 35982662 35982738 -36171144 - L1ME4a LINE L1 -163 5958 5884 253 323 100 72 chr20 35982855 35982980 -36170902 - MIR SINE MIR -58 150 27 655 329 63 40 chr20 35984773 35985220 -36168662 - L2 LINE L2 -663 2651 2195 326 324 34 51 chr20 35985372 35985548 -36168334 - L1MC4a LINE L1 -1896 5912 5740 2533 36 0 3 chr20 35985656 35985959 -36167923 + AluY SINE Alu 1 302 -9 21 0 0 0 chr20 35986024 35986045 -36167837 + AT_rich Low_complexity Low_complexity 1 21 0 2088 107 0 29 chr20 35986114 35986422 -36167460 - AluSx SINE Alu -13 299 1 269 354 39 0 chr20 35988348 35988475 -36165407 - L2 LINE L2 -1 3312 3181 449 324 48 25 chr20 35989162 35989401 -36164481 + MIR SINE MIR 13 258 -4 355 322 117 0 chr20 35989646 35989817 -36164065 - MIR SINE MIR -4 258 68 223 273 77 72 chr20 35993566 35993705 -36160177 - MIR SINE MIR -85 123 9 204 331 27 38 chr20 35999429 35999589 -36154293 - MIR SINE MIR -27 181 18 270 250 44 0 chr20 35999797 35999865 -36154017 + L2 LINE L2 3193 3263 -9 292 264 69 0 chr20 36001284 36001356 -36152526 - L2 LINE L2 -1 3312 3236 220 378 22 0 chr20 36002686 36002776 -36151106 + MIR3 SINE MIR 87 178 -30 1707 140 53 13 chr20 36002925 36003225 -36150657 + AluJo SINE Alu 1 312 0 479 276 90 0 chr20 36003472 36003617 -36150265 + MIR SINE MIR 86 243 -19 245 326 34 0 chr20 36004358 36004447 -36149435 + L2 LINE L2 2677 2768 -546 1532 156 82 92 chr20 36004448 36004531 -36149351 - MER47B DNA MER2_type -1905 418 336 2281 110 10 3 chr20 36004531 36004832 -36149050 + AluSg SINE Alu 1 303 -7 1532 156 82 92 chr20 36004832 36005151 -36148731 - MER47B DNA MER2_type -1987 336 20 644 205 145 56 chr20 36005767 36006175 -36147707 + Charlie8 DNA MER1_type 20 470 -1947 1958 109 25 14 chr20 36006851 36007135 -36146747 + AluSx SINE Alu 1 287 -25 536 111 0 0 chr20 36007629 36007701 -36146181 - AluS SINE Alu -238 74 3 901 80 0 0 chr20 36007867 36007979 -36145903 - AluSg/x SINE Alu -9 301 190 190 254 102 0 chr20 36008397 36008456 -36145426 - MIR SINE MIR -111 151 87 2038 116 3 10 chr20 36008557 36008850 -36145032 - AluSx SINE Alu -19 293 3 1967 104 6 83 chr20 36009014 36009341 -36144541 - AluSq SINE Alu -11 302 1 257 281 52 21 chr20 36009969 36010065 -36143817 + MIR SINE MIR 9 107 -155 741 290 162 16 chr20 36010409 36010840 -36143042 + L1MC4a LINE L1 5444 5937 -1871 318 85 21 0 chr20 36011326 36011373 -36142509 - MADE1 DNA Mariner 0 80 33 2275 108 6 13 chr20 36011865 36012179 -36141703 + AluSx SINE Alu 1 312 0 1488 241 178 25 chr20 36013337 36014029 -36139853 + L2 LINE L2 2177 2974 -340 198 220 40 0 chr20 36015561 36015611 -36138271 + MIR SINE MIR 73 124 -84 2146 108 0 0 chr20 36015729 36016007 -36137875 - AluSx SINE Alu -33 279 2 201 320 124 0 chr20 36016053 36016150 -36137732 + MIR3 SINE MIR 81 189 -19 1802 162 10 23 chr20 36016291 36016600 -36137282 + AluJb SINE Alu 1 305 -7 645 242 99 31 chr20 36016702 36016925 -36136957 + MIR SINE MIR 1 238 -24 3653 183 28 21 chr20 36017691 36018094 -36135788 - L1MB8 LINE L1 0 6247 5835 1942 147 16 22 chr20 36018094 36018408 -36135474 + AluJb SINE Alu 1 312 0 3653 183 28 21 chr20 36018408 36018765 -36135117 - L1MB8 LINE L1 -412 5835 5482 1189 178 83 46 chr20 36018784 36019025 -36134857 - AluJo SINE Alu -62 250 1 8285 225 65 59 chr20 36019025 36019775 -36134107 - L1MB8 LINE L1 -743 5472 4728 1970 150 7 3 chr20 36019775 36020068 -36133814 - AluJo SINE Alu -18 294 1 8285 225 65 59 chr20 36020068 36021759 -36132123 - L1MB8 LINE L1 -1487 4728 3049 659 120 54 174 chr20 36021759 36021943 -36131939 - AluSc SINE Alu -13 296 135 8285 225 65 59 chr20 36021943 36022521 -36131361 - L1MB8 LINE L1 -3166 3049 2476 1850 118 25 18 chr20 36022521 36022801 -36131081 + AluSx SINE Alu 1 282 -30 8285 225 65 59 chr20 36022801 36023177 -36130705 - L1MB8 LINE L1 -3739 2476 2104 2672 48 0 3 chr20 36023177 36023488 -36130394 - AluY SINE Alu -1 310 1 8285 225 65 59 chr20 36023488 36023517 -36130365 - L1MB8 LINE L1 -4111 2104 2077 2242 110 3 0 chr20 36023517 36023816 -36130066 + AluSp SINE Alu 6 305 -8 8285 225 65 59 chr20 36023816 36023871 -36130011 - L1MB8 LINE L1 -4138 2077 2024 695 119 30 0 chr20 36023871 36023972 -36129910 - U6 snRNA snRNA -2 105 2 8285 225 65 59 chr20 36023972 36024230 -36129652 - L1MB8 LINE L1 -4191 2024 1740 2054 251 58 46 chr20 36024264 36024787 -36129095 - L1M4c LINE L1 -4452 2686 2171 1407 196 43 43 chr20 36024787 36025088 -36128794 - AluJb SINE Alu -11 301 1 2054 251 58 46 chr20 36025088 36025441 -36128441 - L1M4c LINE L1 -4967 2171 1639 1747 169 7 0 chr20 36025454 36025738 -36128144 - AluSx SINE Alu -22 290 5 941 161 0 0 chr20 36025740 36025877 -36128005 - AluSq/x SINE Alu -175 137 1 3687 164 63 33 chr20 36025883 36026020 -36127862 - L1M4c LINE L1 -5201 1658 1527 2512 62 0 3 chr20 36026020 36026324 -36127558 - AluY SINE Alu -8 303 1 3687 164 63 33 chr20 36026324 36026473 -36127409 - L1M4c LINE L1 -5332 1527 1384 1798 134 47 4 chr20 36026473 36026749 -36127133 + AluSx SINE Alu 1 288 -24 3687 164 63 33 chr20 36026749 36027240 -36126642 - L1M4c LINE L1 -5475 1384 857 800 161 8 0 chr20 36027262 36027386 -36126496 + AluSq/x SINE Alu 1 125 -188 2986 6 0 0 chr20 36027416 36027731 -36126151 + AluYb8 SINE Alu 1 315 -3 1386 243 58 46 chr20 36027753 36028143 -36125739 - L1M4c LINE L1 -6022 837 306 611 313 27 5 chr20 36029108 36029332 -36124550 + L1ME LINE L1 5596 5824 -297 22 80 0 0 chr20 36029384 36029434 -36124448 + AT_rich Low_complexity Low_complexity 1 50 0 547 192 119 23 chr20 36030002 36030179 -36123703 + L1MC5 LINE L1 7605 7798 -163 1993 139 11 0 chr20 36030217 36030498 -36123384 + AluSx SINE Alu 1 284 -28 210 37 0 0 chr20 36030506 36030533 -36123349 + (CA)n Simple_repeat Simple_repeat 1 27 0 3493 135 21 12 chr20 36030601 36030617 -36123265 + L1MB5 LINE L1 5585 5599 -575 2580 56 0 3 chr20 36030617 36030922 -36122960 + AluY SINE Alu 1 304 -7 3493 135 21 12 chr20 36030922 36031240 -36122642 + L1MB5 LINE L1 5599 5929 -245 1546 164 129 7 chr20 36031240 36031550 -36122332 + MER7A DNA MER2_type 1 346 0 3493 135 21 12 chr20 36031550 36031791 -36122091 + L1MB5 LINE L1 5929 6166 -8 229 225 0 84 chr20 36031821 36031892 -36121990 + L1MC4a LINE L1 5435 5499 -2309 315 326 74 22 chr20 36031966 36032101 -36121781 + L1MC4a LINE L1 5742 5883 -1925 1942 151 6 6 chr20 36032343 36032655 -36121227 + AluSx SINE Alu 1 312 0 200 325 12 0 chr20 36033215 36033295 -36120587 - L3 LINE CR1 -858 719 639 25 0 0 0 chr20 36033386 36033411 -36120471 + AT_rich Low_complexity Low_complexity 1 25 0 268 200 143 14 chr20 36033644 36033714 -36120168 + MLT1B LTR MaLR 22 100 -290 2017 194 72 19 chr20 36033723 36034151 -36119731 + MLT2B3 LTR ERVL 1 451 -103 1199 124 23 0 chr20 36034151 36034328 -36119554 - AluSq SINE Alu -6 307 127 598 181 17 9 chr20 36034329 36034445 -36119437 + MLT2B3 LTR ERVL 438 554 0 1331 173 13 77 chr20 36034447 36034759 -36119123 + MLT1B LTR MaLR 99 390 0 364 291 35 14 chr20 36035353 36035494 -36118388 + MIR SINE MIR 106 249 -13 667 48 0 0 chr20 36035567 36035651 -36118231 - L1PA5 LINE L1 -3 6151 6068 1081 263 134 19 chr20 36036378 36036800 -36117082 - L1MC4a LINE L1 -1639 6169 5797 2284 110 0 3 chr20 36036800 36037100 -36116782 - AluSx SINE Alu -13 299 1 1081 263 134 19 chr20 36037100 36037118 -36116764 - L1MC4a LINE L1 -2011 5797 5782 1693 132 107 13 chr20 36037118 36037428 -36116454 - MER44D DNA MER2_type 0 609 1 1081 263 134 19 chr20 36037428 36037510 -36116372 - L1MC4a LINE L1 -2026 5782 5586 249 260 0 39 chr20 36037515 36037592 -36116290 - Charlie4 DNA MER1_type -5 1956 1883 2026 154 0 6 chr20 36037662 36037973 -36115909 + AluJb SINE Alu 2 310 -2 455 314 59 0 chr20 36038351 36038504 -36115378 + MIR SINE MIR 28 189 -73 1645 169 25 14 chr20 36038941 36039090 -36114792 - AluJo SINE Alu -30 282 127 2282 93 7 17 chr20 36039090 36039392 -36114490 - AluSx SINE Alu -13 299 1 1645 169 25 14 chr20 36039392 36039521 -36114361 - AluJo SINE Alu -185 127 1 290 250 41 15 chr20 36039523 36039634 -36114248 - L1ME LINE L1 -401 5763 5654 1966 138 21 7 chr20 36040428 36040717 -36113165 - AluSx SINE Alu -19 293 1 500 272 110 18 chr20 36040871 36041143 -36112739 - L1ME3 LINE L1 -196 5966 5670 526 197 40 85 chr20 36041598 36041765 -36112117 - L1MC4a LINE L1 -743 5441 5287 2187 114 0 23 chr20 36041765 36042071 -36111811 - AluSx SINE Alu -13 299 1 526 197 40 85 chr20 36042071 36042177 -36111705 - L1MC4a LINE L1 -897 5287 5178 370 204 184 19 chr20 36043863 36043966 -36109916 + MIR SINE MIR 25 144 -64 1917 161 7 0 chr20 36043985 36044289 -36109593 + AluJb SINE Alu 1 306 -6 844 184 6 25 chr20 36044403 36044566 -36109316 + FRAM SINE Alu 1 160 -6 333 0 0 0 chr20 36044586 36044623 -36109259 + (CA)n Simple_repeat Simple_repeat 2 38 0 980 166 11 11 chr20 36044849 36045024 -36108858 - FAM SINE Alu 0 175 1 21 0 0 0 chr20 36045165 36045186 -36108696 + AT_rich Low_complexity Low_complexity 1 21 0 1796 173 20 10 chr20 36045640 36045946 -36107936 - AluJb SINE Alu -3 309 1 2095 123 20 0 chr20 36046043 36046344 -36107538 - AluSx SINE Alu -5 307 1 287 194 0 145 chr20 36046377 36046501 -36107381 + MER102a DNA MER1_type 222 327 -3 30 0 0 0 chr20 36046580 36046610 -36107272 + AT_rich Low_complexity Low_complexity 1 30 0 990 194 40 25 chr20 36046611 36046889 -36106993 - L1MA4 LINE L1 -7 6293 6012 1221 179 15 110 chr20 36047128 36047463 -36106419 + MER33 DNA MER1_type 21 323 -1 233 277 54 36 chr20 36047892 36048004 -36105878 - MIR SINE MIR -42 220 107 271 304 228 22 chr20 36048254 36048438 -36105444 - L3 LINE CR1 -93 1484 1263 795 211 78 0 chr20 36049060 36049226 -36104656 - FRAM SINE Alu 0 176 1 300 238 177 41 chr20 36049829 36049976 -36103906 - L2 LINE L2 0 3313 3147 22 35 0 0 chr20 36050116 36050145 -36103737 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr20 36050226 36050247 -36103635 + AT_rich Low_complexity Low_complexity 1 21 0 2261 93 3 20 chr20 36050251 36050551 -36103331 + AluSx SINE Alu 1 295 -17 21 36 0 0 chr20 36050727 36050755 -36103127 + AT_rich Low_complexity Low_complexity 1 28 0 350 246 208 8 chr20 36051284 36051414 -36102468 + MIR3 SINE MIR 38 193 -15 3229 217 73 14 chr20 36051640 36052237 -36101645 + L1MB8 LINE L1 2405 3084 -3062 2325 99 3 0 chr20 36052237 36052541 -36101341 - AluSx SINE Alu -7 305 1 3229 217 73 14 chr20 36052541 36052930 -36100952 + L1MB8 LINE L1 3084 3449 -2697 1675 175 19 23 chr20 36052930 36053415 -36100467 + AluJo SINE Alu 1 484 0 734 142 0 11 chr20 36053239 36053503 -36100379 + (GAA)n Simple_repeat Simple_repeat 1 262 0 5909 167 92 43 chr20 36053582 36053863 -36100019 + L1MB8 LINE L1 3496 3762 -2416 1980 137 20 13 chr20 36053863 36054163 -36099719 + AluJo SINE Alu 7 308 -4 5909 167 92 43 chr20 36054163 36056432 -36097450 + L1MB8 LINE L1 3762 6173 -5 391 200 0 24 chr20 36056443 36056528 -36097354 + L1MB7 LINE L1 5861 5943 -231 1991 130 46 35 chr20 36056528 36056897 -36096985 + THE1C LTR MaLR 1 373 -2 765 186 231 0 chr20 36056927 36057126 -36096756 + L1MB7 LINE L1 5933 6177 -7 1440 174 18 18 chr20 36057134 36057416 -36096466 + AluJo SINE Alu 6 287 -25 234 196 48 95 chr20 36059618 36059664 -36094218 - L1ME3A LINE L1 -5 6165 6118 1627 173 7 14 chr20 36059664 36059959 -36093923 - AluJb SINE Alu -19 293 1 234 196 48 95 chr20 36059959 36060080 -36093802 - L1ME3A LINE L1 -52 6118 6006 451 276 177 30 chr20 36060116 36060511 -36093371 + L1ME4a LINE L1 4951 5403 -743 919 175 48 10 chr20 36060544 36060750 -36093132 + L1MB8 LINE L1 5263 5476 -702 723 171 0 0 chr20 36060760 36060871 -36093011 + FLAM_C SINE Alu 6 116 -27 3509 173 40 25 chr20 36060901 36061595 -36092287 + L1MB8 LINE L1 5474 6178 0 404 196 165 30 chr20 36061661 36061794 -36092088 + L1ME3A LINE L1 6020 6170 0 * 410 260 154 29 chr20 36061769 36062093 -36091789 + L1ME4a LINE L1 5452 5819 -302 2008 111 36 0 chr20 36062093 36062372 -36091510 - AluSg SINE Alu -21 289 1 410 260 154 29 chr20 36062372 36062384 -36091498 + L1ME4a LINE L1 5819 5828 -293 297 0 0 0 chr20 36062499 36062532 -36091350 + (CA)n Simple_repeat Simple_repeat 2 34 0 640 247 125 103 chr20 36063072 36063224 -36090658 + MLT1G1 LTR MaLR 18 165 -390 1846 154 0 3 chr20 36063224 36063509 -36090373 + AluSx SINE Alu 14 297 -15 640 247 125 103 chr20 36063509 36063821 -36090061 + MLT1G1 LTR MaLR 165 542 -13 223 304 51 0 chr20 36063823 36063902 -36089980 + L2 LINE L2 3009 3091 -181 2321 52 42 0 chr20 36063964 36064250 -36089632 - AluY SINE Alu -13 298 1 41626 66 10 3 chr20 36064836 36070942 -36082940 - L1PA5 LINE L1 -2 6152 11 579 183 10 0 chr20 36071032 36071136 -36082746 + MER5A DNA MER1_type 84 188 -1 388 161 46 23 chr20 36071393 36071480 -36082402 + L1ME4a LINE L1 5998 6086 -35 1280 216 93 30 chr20 36071912 36072336 -36081546 + L1MCa LINE L1 2096 2585 -3841 2257 112 0 0 chr20 36072336 36072631 -36081251 + AluSx SINE Alu 1 295 -17 1280 216 93 30 chr20 36072631 36072893 -36080989 + L1MCa LINE L1 2585 2829 -3597 * 1422 226 50 2 chr20 36072881 36073297 -36080585 + L1MCa LINE L1 3202 3637 -2789 1522 164 30 19 chr20 36073316 36073585 -36080297 + AluJo SINE Alu 30 301 -11 1360 160 59 65 chr20 36073589 36073762 -36080120 + L1MB7 LINE L1 5714 5887 -297 1837 154 0 35 chr20 36073762 36074073 -36079809 + AluJb SINE Alu 3 302 -10 1360 160 59 65 chr20 36074073 36074356 -36079526 + L1MB7 LINE L1 5887 6127 -57 417 121 45 0 chr20 36074398 36074464 -36079418 + L1MB7 LINE L1 6116 6184 0 731 196 22 0 chr20 36074491 36074629 -36079253 + L1MB7 LINE L1 6034 6174 -10 1385 252 140 27 chr20 36074637 36074783 -36079099 + L1MEc LINE L1 2149 2277 -3938 1375 208 18 18 chr20 36074783 36075118 -36078764 + AluJb SINE Alu 1 335 0 1385 252 140 27 chr20 36075118 36075257 -36078625 + L1MEc LINE L1 2277 2399 -3816 2117 130 7 0 chr20 36075257 36075558 -36078324 + AluSx SINE Alu 1 303 -9 1385 252 140 27 chr20 36075558 36076126 -36077756 + L1MEc LINE L1 2399 3064 -3151 1256 220 134 61 chr20 36076128 36076867 -36077015 + L1MEc LINE L1 3711 4541 -1674 2146 108 0 33 chr20 36076870 36077176 -36076706 + AluSx SINE Alu 1 296 -16 927 234 110 72 chr20 36077181 36077527 -36076355 + HAL1 LINE L1 1564 1922 -585 1788 72 126 15 chr20 36077570 36077833 -36076049 + AluSg SINE Alu 1 292 -18 302 206 27 0 chr20 36077873 36077946 -36075936 + L1PB4 LINE L1 6080 6154 -2 316 319 0 0 chr20 36078016 36078107 -36075775 - L1MC4 LINE L1 -1339 6703 6613 315 213 0 0 chr20 36078107 36078182 -36075700 + (TA)n Simple_repeat Simple_repeat 2 76 0 300 253 0 13 chr20 36078182 36078257 -36075625 + L1MCa LINE L1 1995 2068 -4358 377 170 0 32 chr20 36078257 36078351 -36075531 + (TA)n Simple_repeat Simple_repeat 2 92 0 554 237 155 16 chr20 36078394 36078639 -36075243 + HAL1 LINE L1 2062 2340 -167 1641 183 14 3 chr20 36078884 36079179 -36074703 + AluJo SINE Alu 1 298 -14 312 140 88 0 chr20 36079530 36079587 -36074295 - AluSx SINE Alu -61 239 178 1185 145 0 11 chr20 36079632 36079811 -36074071 - AluSx SINE Alu -135 177 1 1032 90 0 0 chr20 36079984 36080129 -36073753 + (TG)n Simple_repeat Simple_repeat 2 146 0 2131 123 3 0 chr20 36080305 36080597 -36073285 + AluSg SINE Alu 1 293 -17 2460 56 0 33 chr20 36080600 36080906 -36072976 + AluY SINE Alu 1 296 -15 231 216 27 14 chr20 36080906 36080980 -36072902 - MER113 DNA MER1_type? -412 109 35 351 276 32 32 chr20 36081148 36081271 -36072611 - L2 LINE L2 -500 2814 2692 609 259 67 26 chr20 36081453 36081646 -36072236 - L2 LINE L2 -898 2416 2216 902 253 20 5 chr20 36081712 36081910 -36071972 - MIR SINE MIR -30 232 32 201 319 154 0 chr20 36081986 36082077 -36071805 - L2 LINE L2 -19 3253 3149 578 263 34 23 chr20 36082094 36082269 -36071613 - MIR SINE MIR -9 253 77 1738 133 50 46 chr20 36082315 36082593 -36071289 + L1MB2 LINE L1 5821 6102 -69 907 164 0 0 chr20 36082593 36082721 -36071161 - FLAM_C SINE Alu -5 128 1 1738 133 50 46 chr20 36082721 36082765 -36071117 + L1MB2 LINE L1 6102 6144 -27 191 119 24 0 chr20 36082765 36082794 -36071088 + (TA)n Simple_repeat Simple_repeat 1 33 -10 1468 200 14 31 chr20 36082794 36083084 -36070798 - AluJb SINE Alu -27 285 1 191 119 24 0 chr20 36083084 36083096 -36070786 + (TA)n Simple_repeat Simple_repeat 33 43 0 2172 108 10 0 chr20 36083121 36083417 -36070465 + AluSg SINE Alu 1 299 -11 1212 128 96 0 chr20 36083479 36083666 -36070216 + AluJo SINE Alu 90 294 -18 22 0 0 0 chr20 36083725 36083747 -36070135 + AT_rich Low_complexity Low_complexity 1 22 0 2335 95 10 0 chr20 36083930 36084226 -36069656 - AluSx SINE Alu -13 299 1 261 247 133 47 chr20 36084375 36084525 -36069357 + MIR SINE MIR 93 255 -7 260 29 0 0 chr20 36084603 36084638 -36069244 - AluJb SINE Alu -5 297 263 902 169 115 16 chr20 36084638 36084821 -36069061 - AluJb SINE Alu -90 222 22 790 204 135 9 chr20 36085309 36085539 -36068343 - MIR SINE MIR 0 262 4 184 310 17 0 chr20 36085542 36085600 -36068282 - L2 LINE L2 -78 3194 3136 225 240 0 27 chr20 36086102 36086177 -36067705 + (CCCCG)n Simple_repeat Simple_repeat 1 73 0 487 232 56 8 chr20 36087286 36087411 -36066471 + MER94 DNA DNA 1 131 -3 1677 175 18 0 chr20 36087451 36087783 -36066099 + L1 LINE L1 4616 4953 -1193 241 221 53 84 chr20 36087784 36087852 -36066030 + AluSg/x SINE Alu 101 167 -133 2211 108 3 0 chr20 36087852 36088139 -36065743 + AluSg SINE Alu 10 297 -13 3220 178 44 33 chr20 36088139 36088576 -36065306 + LTR39 LTR ERV1 169 616 -167 2408 87 0 0 chr20 36088576 36088875 -36065007 + AluSx SINE Alu 1 299 -13 3220 178 44 33 chr20 36088875 36089045 -36064837 + LTR39 LTR ERV1 616 783 0 2390 74 0 0 chr20 36089626 36089923 -36063959 + AluSg SINE Alu 1 297 -13 1017 154 31 6 chr20 36090154 36090316 -36063566 - FRAM SINE Alu 0 166 1 502 234 0 27 chr20 36090473 36090584 -36063298 - L2 LINE L2 -15 3298 3191 195 241 19 0 chr20 36090585 36090639 -36063243 - MIR SINE MIR -2 260 206 225 146 0 0 chr20 36090790 36090831 -36063051 + LTR66 LTR ERVL 399 439 -171 308 244 47 0 chr20 36090837 36090923 -36062959 - L1MC4 LINE L1 -1339 6703 6614 240 251 76 0 chr20 36090927 36091036 -36062846 - L1MC4 LINE L1 -1139 6646 6578 225 231 62 0 chr20 36091049 36091114 -36062768 - L1MC3 LINE L1 -1139 6646 6578 555 270 0 0 chr20 36091124 36091298 -36062584 + (TA)n Simple_repeat Simple_repeat 1 174 0 271 189 28 30 chr20 36091298 36091404 -36062478 - L1MCa LINE L1 -1339 6983 2006 240 300 0 0 chr20 36091327 36091417 -36062465 + L1MC4 LINE L1 6614 6703 -1339 * 200 222 0 0 chr20 36091418 36091463 -36062419 + (TA)n Simple_repeat Simple_repeat 1 45 0 1095 155 0 0 chr20 36091518 36091673 -36062209 - FRAM SINE Alu -8 158 4 1678 266 77 22 chr20 36091687 36091828 -36062054 - L1MC4 LINE L1 -142 7900 7768 2216 117 3 10 chr20 36091828 36092135 -36061747 - AluSp SINE Alu -6 307 3 2205 125 0 0 chr20 36092137 36092433 -36061449 - AluSx SINE Alu -16 296 1 1678 266 77 22 chr20 36092433 36092928 -36060954 - L1MC4 LINE L1 -274 7768 7226 1707 109 40 66 chr20 36092932 36093234 -36060648 - AluSx SINE Alu -18 294 1 1146 68 0 0 chr20 36093269 36093401 -36060481 - AluY SINE Alu -179 132 1 567 243 119 18 chr20 36093402 36093620 -36060262 - L1MC4 LINE L1 -804 7238 6999 1551 179 23 83 chr20 36093631 36094016 -36059866 - L1ME2 LINE L1 -9 6155 5794 1186 186 0 1 chr20 36094037 36094301 -36059581 + AluJo SINE Alu 2 300 -12 1667 101 53 98 chr20 36094305 36094446 -36059436 + MER39B LTR ERV1 20 166 -487 2363 101 3 0 chr20 36094446 36094754 -36059128 + AluSx SINE Alu 1 309 -3 1667 101 53 98 chr20 36094754 36094950 -36058932 + MER39B LTR ERV1 166 342 -311 380 227 0 0 chr20 36095007 36095082 -36058800 - L1MC4 LINE L1 -1033 7009 6935 180 301 0 0 chr20 36095320 36095423 -36058459 + (CA)n Simple_repeat Simple_repeat 2 104 0 220 318 15 15 chr20 36095464 36095530 -36058352 - L2 LINE L2 -21 3251 3186 1602 161 21 24 chr20 36095565 36095856 -36058026 + AluJb SINE Alu 9 298 -14 542 286 52 7 chr20 36096009 36096163 -36057719 - L2 LINE L2 -3 3269 3109 743 190 0 0 chr20 36096198 36096314 -36057568 - FLAM_C SINE Alu -22 121 6 1716 101 13 21 chr20 36096481 36096719 -36057163 - AluSc SINE Alu -18 291 56 726 295 42 25 chr20 36096802 36097158 -36056724 + L1M4 LINE L1 3255 3616 -2530 2710 111 16 5 chr20 36097252 36097623 -36056259 + THE1C LTR MaLR 1 375 0 569 187 145 36 chr20 36097688 36097854 -36056028 - MER5A DNA MER1_type -5 184 1 1937 114 23 0 chr20 36098934 36099197 -36054685 - AluSq SINE Alu -30 283 15 811 161 0 8 chr20 36099199 36099317 -36054565 + FLAM_C SINE Alu 2 118 -25 210 37 0 0 chr20 36099320 36099347 -36054535 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 225 0 0 0 chr20 36099632 36099657 -36054225 + (A)n Simple_repeat Simple_repeat 1 25 0 2212 85 11 0 chr20 36099717 36100027 -36053855 + AluSq SINE Alu 1 313 0 458 139 96 35 chr20 36100236 36100351 -36053531 + MER112 DNA MER1_type 132 253 -7 2989 163 43 13 chr20 36100586 36101140 -36052742 - L1MB7 LINE L1 -19 6165 5595 1364 92 0 6 chr20 36101155 36101329 -36052553 - AluSg/x SINE Alu -55 257 85 407 233 12 0 chr20 36101332 36101418 -36052464 - L1MB7 LINE L1 -574 5606 5520 2084 108 7 0 chr20 36101419 36101728 -36052154 + AluJb SINE Alu 1 311 0 1134 175 21 0 chr20 36101773 36101962 -36051920 - AluJo SINE Alu -119 193 1 33 25 0 0 chr20 36101962 36102002 -36051880 + AT_rich Low_complexity Low_complexity 1 40 0 2311 86 13 0 chr20 36102007 36102308 -36051574 + AluSc SINE Alu 1 305 -4 528 135 29 10 chr20 36102312 36102416 -36051466 - L1MA8 LINE L1 -11 6280 6175 522 185 17 25 chr20 36102453 36102572 -36051310 - LTR33 LTR ERVL -2 519 402 1569 187 72 82 chr20 36102635 36102687 -36051195 - MLT2D LTR ERVL 0 414 363 2277 100 7 3 chr20 36102687 36102988 -36050894 + AluSq SINE Alu 5 306 -7 1569 187 72 82 chr20 36102988 36103352 -36050530 - MLT2D LTR ERVL -51 363 2 2854 57 0 0 chr20 36103402 36103735 -36050147 - L1PA6 LINE L1 -1 6153 5821 885 142 0 0 chr20 36103763 36103883 -36049999 - FLAM_C SINE Alu -23 120 1 678 280 18 84 chr20 36103894 36104169 -36049713 - LTR33 LTR ERVL -264 257 1 258 253 115 22 chr20 36104204 36104386 -36049496 + L1M4 LINE L1 3102 3300 -2846 1808 164 13 26 chr20 36104388 36104692 -36049190 + AluJb SINE Alu 1 300 -12 1645 216 22 79 chr20 36105220 36105654 -36048228 + L1MC5 LINE L1 6735 7129 -832 2489 94 3 0 chr20 36105654 36105963 -36047919 + AluSp SINE Alu 1 310 -3 1645 216 22 79 chr20 36105963 36106108 -36047774 + L1MC5 LINE L1 7129 7281 -680 1176 156 85 0 chr20 36106125 36106336 -36047546 + AluJo SINE Alu 84 312 0 663 199 186 96 chr20 36106338 36106901 -36046981 + L1MC5 LINE L1 7298 7911 -50 945 198 11 0 chr20 36106903 36107080 -36046802 + AluJb SINE Alu 134 312 0 375 207 159 29 chr20 36107084 36107195 -36046687 + L1M4 LINE L1 3072 3227 -2919 1785 131 16 84 chr20 36107206 36107527 -36046355 + AluJb SINE Alu 1 299 -13 883 130 0 55 chr20 36107533 36107679 -36046203 + FLAM_C SINE Alu 1 138 -5 579 291 89 48 chr20 36107729 36107977 -36045905 + L2 LINE L2 3021 3282 -31 1707 173 3 14 chr20 36107977 36108261 -36045621 + AluJb SINE Alu 13 293 -19 579 291 89 48 chr20 36108261 36108283 -36045599 + L2 LINE L2 3282 3302 -11 2155 94 0 85 chr20 36108334 36108664 -36045218 + AluSx SINE Alu 5 306 -6 25 0 0 0 chr20 36108953 36108978 -36044904 + AT_rich Low_complexity Low_complexity 1 25 0 212 333 0 14 chr20 36109563 36109635 -36044247 + MIR SINE MIR 62 132 -76 * 400 215 32 0 chr20 36109623 36109716 -36044166 + L2 LINE L2 2576 2671 -643 696 136 0 27 chr20 36109738 36109848 -36044034 - FLAM_C SINE Alu -25 118 12 691 272 167 4 chr20 36109871 36110227 -36043655 + L2 LINE L2 2701 3104 -209 247 297 11 0 chr20 36110249 36110340 -36043542 - L1P4 LINE L1 -349 5825 5734 2304 101 0 10 chr20 36110346 36110643 -36043239 - AluSg SINE Alu -16 294 1 1126 225 11 22 chr20 36111350 36111635 -36042247 + L2 LINE L2 2643 2922 -350 457 241 143 18 chr20 36111620 36111732 -36042150 + L2 LINE L2 3175 3300 -13 * 587 279 38 0 chr20 36111903 36112061 -36041821 + MIR3 SINE MIR 27 190 -18 321 300 22 0 chr20 36112532 36112622 -36041260 + MLT1J LTR MaLR 2 93 -418 355 190 63 0 chr20 36112694 36112773 -36041109 + MLT1J LTR MaLR 420 503 -8 2078 118 10 23 chr20 36112875 36113180 -36040702 + AluJo SINE Alu 11 311 -1 240 354 72 3 chr20 36113228 36113423 -36040459 + L3 LINE CR1 1008 1279 -298 2027 139 3 0 chr20 36113628 36113915 -36039967 - AluSx SINE Alu -24 288 1 2398 110 3 0 chr20 36114140 36114449 -36039433 - AluSx SINE Alu -2 310 1 3717 136 0 6 chr20 36114581 36115111 -36038771 - MER1A DNA MER1_type 0 527 1 1755 149 45 24 chr20 36115352 36115641 -36038241 - AluJo SINE Alu -17 295 1 542 286 130 6 chr20 36115679 36115840 -36038042 + L3 LINE CR1 1396 1576 -1 2313 104 3 16 chr20 36115909 36116226 -36037656 - AluSq SINE Alu 0 313 1 248 230 14 81 chr20 36116651 36116725 -36037157 + MIR3 SINE MIR 127 195 -13 2458 86 3 0 chr20 36116863 36117165 -36036717 + AluSp SINE Alu 1 303 -10 384 264 86 1 chr20 36117165 36117285 -36036597 + MIR SINE MIR 22 150 -58 334 305 104 13 chr20 36117659 36117813 -36036069 + MIR SINE MIR 21 188 -74 1282 192 128 4 chr20 36117954 36118220 -36035662 - AluSx SINE Alu -13 299 1 398 305 14 14 chr20 36118400 36118541 -36035341 - L1MC/D LINE L1 -2093 5715 5575 309 306 29 65 chr20 36118574 36118744 -36035138 + L2 LINE L2 2288 2451 -863 1340 128 23 59 chr20 36118754 36118925 -36034957 - AluJo SINE Alu -13 299 136 2571 77 0 0 chr20 36118925 36119236 -36034646 - AluY SINE Alu 0 311 1 1340 128 23 59 chr20 36119236 36119283 -36034599 - AluJo SINE Alu -176 136 89 216 208 62 0 chr20 36119362 36119410 -36034472 + MIR3 SINE MIR 144 194 -14 493 260 37 60 chr20 36120041 36120183 -36033699 + MIR SINE MIR 3 147 -75 2423 98 3 0 chr20 36120183 36120488 -36033394 + AluSp SINE Alu 1 306 -7 2314 109 42 28 chr20 36120489 36120848 -36033034 + THE1B LTR MaLR 1 364 0 493 260 37 60 chr20 36120848 36120864 -36033018 + MIR SINE MIR 146 160 -62 343 226 189 0 chr20 36120880 36120986 -36032896 - L2 LINE L2 0 3313 3188 366 185 231 0 chr20 36121006 36121114 -36032768 + L2 LINE L2 3180 3312 -1 313 232 14 14 chr20 36121184 36121253 -36032629 + L2 LINE L2 3245 3313 0 1091 107 23 137 chr20 36121255 36121343 -36032539 - MER44D DNA MER2_type -1883 704 608 5225 117 78 128 chr20 36121343 36121656 -36032226 + Tigger3b DNA MER2_type 1 328 -2700 2352 82 16 10 chr20 36121656 36121962 -36031920 + AluY SINE Alu 1 308 -3 5225 117 78 128 chr20 36121962 36122535 -36031347 + Tigger3b DNA MER2_type 328 805 -2223 2226 96 0 63 chr20 36122535 36122677 -36031205 + AluSx SINE Alu 1 150 -162 2189 114 3 3 chr20 36122677 36122974 -36030908 + AluSx SINE Alu 1 297 -15 2226 96 0 63 chr20 36122974 36123164 -36030718 + AluSx SINE Alu 150 312 0 5225 117 78 128 chr20 36123164 36123570 -36030312 + Tigger3b DNA MER2_type 805 1230 -1 1091 107 23 137 chr20 36123570 36123628 -36030254 - MER44D DNA MER2_type -1979 608 545 1929 167 3 7 chr20 36123628 36123922 -36029960 - AluJb SINE Alu -19 293 1 1091 107 23 137 chr20 36123922 36124036 -36029846 - MER44D DNA MER2_type -2042 545 473 609 210 0 22 chr20 36124052 36124086 -36029796 - MER44D DNA MER2_type -2086 405 372 751 157 74 0 chr20 36124086 36124207 -36029675 - FLAM_C SINE Alu -3 130 1 609 210 0 22 chr20 36124207 36124310 -36029572 - MER44D DNA MER2_type -2119 372 1 185 321 0 0 chr20 36124386 36124439 -36029443 - L2 LINE L2 0 3313 3261 393 361 32 6 chr20 36124527 36124685 -36029197 - L2 LINE L2 -193 3079 2918 2204 98 0 49 chr20 36124821 36125126 -36028756 + AluSx SINE Alu 1 290 -22 261 83 0 0 chr20 36125887 36125923 -36027959 - U4 snRNA snRNA -1 144 109 2146 124 0 3 chr20 36125923 36126221 -36027661 + AluSx SINE Alu 1 297 -15 1139 66 0 0 chr20 36126254 36126390 -36027492 - AluSp SINE Alu -177 136 1 1779 241 44 19 chr20 36126477 36126951 -36026931 - LTR16C LTR ERVL -4 487 2 2499 67 3 3 chr20 36127022 36127319 -36026563 - AluSp SINE Alu -16 297 1 457 233 31 78 chr20 36127460 36127616 -36026266 - MIR SINE MIR -69 139 8 234 118 0 0 chr20 36127644 36127678 -36026204 - MIR3 SINE MIR -25 183 150 573 203 70 21 chr20 36127733 36127876 -36026006 + MER103 DNA DNA 10 159 -7 2087 143 0 0 chr20 36128933 36129227 -36024655 + AluSx SINE Alu 13 306 -6 262 243 66 88 chr20 36129343 36129479 -36024403 - MIR3 SINE MIR -61 147 15 2161 119 13 13 chr20 36130027 36130339 -36023543 + AluJb SINE Alu 1 312 0 306 267 62 95 chr20 36130561 36130688 -36023194 - MIR SINE MIR -33 229 112 2100 146 0 3 chr20 36130688 36130989 -36022893 + AluSx SINE Alu 1 300 -12 306 267 62 95 chr20 36130989 36131066 -36022816 - MIR SINE MIR -150 112 34 285 100 0 0 chr20 36131658 36131698 -36022184 + MER4D LTR ERV1 791 830 -73 423 262 115 8 chr20 36131887 36132030 -36021852 - MIR3 SINE MIR -75 133 1 2359 76 0 16 chr20 36132133 36132436 -36021446 - AluY SINE Alu -13 298 1 2271 102 10 0 chr20 36132624 36132919 -36020963 + AluYa5 SINE Alu 1 298 -13 2379 106 0 3 chr20 36132921 36133232 -36020650 + AluSx SINE Alu 3 312 0 377 198 52 0 chr20 36133313 36133409 -36020473 + L1MC5 LINE L1 7825 7925 -36 * 489 265 142 48 chr20 36133399 36133755 -36020127 + L1MEc LINE L1 1439 1760 -4455 1983 149 24 0 chr20 36133755 36134051 -36019831 + AluSx SINE Alu 1 303 -9 489 265 142 48 chr20 36134051 36134389 -36019493 + L1MEc LINE L1 1760 2065 -4150 2387 99 0 3 chr20 36134389 36134701 -36019181 + AluSx SINE Alu 1 311 -1 489 265 142 48 chr20 36134701 36134939 -36018943 + L1MEc LINE L1 2065 2417 -3798 447 287 47 13 chr20 36135227 36135377 -36018505 - MER5B DNA MER1_type -16 162 8 1053 186 5 10 chr20 36135394 36135598 -36018284 - MER3 DNA MER1_type -1 208 6 266 308 0 0 chr20 36135602 36135667 -36018215 + L2 LINE L2 3199 3263 -50 2260 89 28 0 chr20 36136317 36136608 -36017274 - AluSg SINE Alu -11 299 1 529 311 102 19 chr20 36136797 36137119 -36016763 + MLT1L LTR MaLR 214 562 -53 833 199 55 0 chr20 36137279 36137425 -36016457 - FRAM SINE Alu -22 154 1 1817 169 13 13 chr20 36137450 36137757 -36016125 - AluJb SINE Alu -1 311 5 196 284 161 0 chr20 36137758 36137839 -36016043 + MIR SINE MIR 110 203 -59 2167 134 3 3 chr20 36137881 36138186 -36015696 - AluSq SINE Alu -8 305 1 339 188 102 117 chr20 36138215 36138343 -36015539 + L2 LINE L2 3188 3313 0 613 272 126 31 chr20 36138889 36139278 -36014604 + L1ME1 LINE L1 5664 6085 -81 2257 90 27 7 chr20 36139278 36139577 -36014305 + AluSq SINE Alu 1 305 -8 244 301 78 39 chr20 36139812 36139915 -36013967 + MIR SINE MIR 96 202 -60 * 265 351 11 0 chr20 36139900 36139994 -36013888 - L2 LINE L2 -249 3023 2929 374 294 10 0 chr20 36141082 36141184 -36012698 - MIR SINE MIR 0 262 160 1802 179 75 41 chr20 36141232 36141674 -36012208 - LTR2B LTR ERV1 -2 488 32 2351 96 3 3 chr20 36141982 36142294 -36011588 + AluSq SINE Alu 1 312 -1 506 251 59 59 chr20 36142421 36142624 -36011258 + MIR3 SINE MIR 5 207 -1 340 125 0 0 chr20 36142694 36142742 -36011140 - Alu SINE Alu -254 48 1 2327 82 7 20 chr20 36142767 36143073 -36010809 + AluSg SINE Alu 1 302 -8 1570 196 82 94 chr20 36143148 36143659 -36010223 - MLT1D LTR MaLR 0 505 1 426 326 51 6 chr20 36144087 36144265 -36009617 + MIR SINE MIR 71 256 -6 478 284 52 0 chr20 36144616 36144750 -36009132 + MIR3 SINE MIR 30 170 -38 232 239 0 0 chr20 36144912 36144958 -36008924 + GA-rich Low_complexity Low_complexity 3 48 0 536 283 32 78 chr20 36144983 36145202 -36008680 - MIR SINE MIR -20 242 34 2113 119 0 7 chr20 36145645 36145950 -36007932 - AluSx SINE Alu 0 303 1 1699 195 47 0 chr20 36145956 36146254 -36007628 - AluJo SINE Alu 0 312 1 300 209 30 0 chr20 36146312 36146379 -36007503 + L1MB4 LINE L1 6106 6174 -6 426 20 0 0 chr20 36146401 36146452 -36007430 + (TCTCCC)n Simple_repeat Simple_repeat 1 51 0 5572 58 38 56 chr20 36146452 36147277 -36006605 + SVA Other Other 57 866 -520 1151 47 4 11 chr20 36147388 36147662 -36006220 + SVA Other Other 693 866 -592 6699 55 10 65 chr20 36147675 36148685 -36005197 + SVA Other Other 433 1386 0 1271 161 5 0 chr20 36148698 36148891 -36004991 + AluJo SINE Alu 1 194 -118 23 0 0 0 chr20 36148917 36148940 -36004942 + AT_rich Low_complexity Low_complexity 1 23 0 2373 92 20 0 chr20 36148976 36149279 -36004603 + AluSx SINE Alu 1 309 -3 1027 244 52 65 chr20 36149641 36149966 -36003916 + LTR37B LTR ERV1 1 320 -148 1803 142 20 30 chr20 36149966 36150269 -36003613 - AluJb SINE Alu -12 300 1 1027 244 52 65 chr20 36150269 36150389 -36003493 + LTR37B LTR ERV1 320 440 -28 2132 127 0 3 chr20 36150392 36150699 -36003183 - AluSx SINE Alu 0 306 1 317 288 54 18 chr20 36150754 36150865 -36003017 - MIR SINE MIR -62 200 86 420 323 78 18 chr20 36150930 36151097 -36002785 - L2 LINE L2 0 3272 3096 201 39 0 0 chr20 36151140 36151166 -36002716 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 333 174 104 87 chr20 36151216 36151331 -36002551 - L2 LINE L2 -188 3084 2968 1984 112 91 0 chr20 36151583 36151869 -36002013 - AluJo SINE Alu 0 312 1 1058 273 99 83 chr20 36151871 36151931 -36001951 + L1M4 LINE L1 4053 4111 -2035 2477 96 0 0 chr20 36151931 36152234 -36001648 - AluSx SINE Alu -9 303 1 1058 273 99 83 chr20 36152234 36152541 -36001341 + L1M4 LINE L1 4111 4412 -1734 2198 109 14 0 chr20 36152541 36152825 -36001057 + AluSx SINE Alu 1 288 -24 1058 273 99 83 chr20 36152825 36153182 -36000700 + L1M4 LINE L1 4412 4762 -1384 2483 87 3 0 chr20 36153182 36153494 -36000388 + AluSp SINE Alu 1 313 0 1058 273 99 83 chr20 36153494 36153898 -35999984 + L1M4 LINE L1 4762 5201 -945 1018 101 0 54 chr20 36153899 36154047 -35999835 + FLAM_C SINE Alu 1 140 -3 289 146 0 0 chr20 36154047 36154095 -35999787 - L1P3 LINE L1 -5790 671 624 859 151 7 0 chr20 36154101 36154247 -35999635 - Tigger3(Golem) DNA MER2_type -97 2932 2786 12184 81 12 15 chr20 36154253 36154724 -35999158 + L1PA7 LINE L1 5 476 -5985 2409 99 0 0 chr20 36154724 36155028 -35998854 + AluSg SINE Alu 1 304 -6 12184 81 12 15 chr20 36155028 36155413 -35998469 + L1PA7 LINE L1 476 860 -5601 2254 99 3 10 chr20 36155413 36155706 -35998176 + AluSx SINE Alu 7 297 -15 12184 81 12 15 chr20 36155706 36156825 -35997057 + L1PA7 LINE L1 860 1955 -4506 7947 71 12 6 chr20 36156825 36158659 -35995223 + L1PA7 LINE L1 4616 6469 0 1664 117 8 11 chr20 36158659 36158925 -35994957 - Tigger3(Golem) DNA MER2_type -239 2790 2526 462 282 14 21 chr20 36159351 36159493 -35994389 + MIR SINE MIR 6 146 -116 351 136 0 0 chr20 36159515 36159574 -35994308 + (TCCC)n Simple_repeat Simple_repeat 1 59 0 709 146 9 0 chr20 36159576 36159809 -35994073 - FLAM_C SINE Alu 0 236 3 215 206 82 62 chr20 36159825 36159922 -35993960 + MIR SINE MIR 164 262 0 2293 93 7 0 chr20 36160489 36160778 -35993104 - AluSx SINE Alu -4 308 18 395 155 12 36 chr20 36160785 36160869 -35993013 + MIR SINE MIR 39 120 -142 780 155 7 42 chr20 36160872 36161014 -35992868 - FLAM_C SINE Alu -4 139 3 1113 150 9 62 chr20 36161014 36161261 -35992621 - AluJo SINE Alu 0 312 83 557 291 25 0 chr20 36161562 36161720 -35992162 + MIR SINE MIR 80 241 -21 2396 115 0 0 chr20 36161856 36162168 -35991714 + AluSx SINE Alu 1 312 0 1590 243 75 42 chr20 36162355 36162747 -35991135 + L1ME3A LINE L1 5377 5793 -377 1991 113 4 4 chr20 36162747 36163013 -35990869 - AluJb SINE Alu -19 293 28 1590 243 75 42 chr20 36163013 36163163 -35990719 + L1ME3A LINE L1 5793 5937 -233 2192 104 50 0 chr20 36163441 36163739 -35990143 + AluSq SINE Alu 1 313 0 1406 154 92 33 chr20 36164172 36164445 -35989437 + AluJo SINE Alu 1 289 -23 26 0 0 0 chr20 36164445 36164471 -35989411 + AT_rich Low_complexity Low_complexity 1 26 0 1809 138 15 0 chr20 36164514 36164775 -35989107 - AluSx SINE Alu -14 298 34 669 234 37 103 chr20 36164793 36165066 -35988816 + MER112 DNA MER1_type 2 256 0 356 296 0 10 chr20 36165246 36165344 -35988538 + MIR SINE MIR 43 139 -69 214 240 0 0 chr20 36165506 36165556 -35988326 + GA-rich Low_complexity Low_complexity 1 50 0 543 198 136 19 chr20 36166494 36166656 -35987226 - MIR SINE MIR 0 262 82 2383 115 0 0 chr20 36167025 36167337 -35986545 - AluSx SINE Alu 0 312 1 186 333 14 0 chr20 36167337 36167406 -35986476 - L2 LINE L2 -248 3024 2955 364 270 251 14 chr20 36167558 36167769 -35986113 + MIR SINE MIR 2 262 0 180 250 0 0 chr20 36167801 36167837 -35986045 - L2 LINE L2 -565 2749 2714 283 122 24 0 chr20 36168072 36168125 -35985757 + MIR SINE MIR 100 153 -109 290 222 0 12 chr20 36168579 36168660 -35985222 + (CGGGG)n Simple_repeat Simple_repeat 5 84 0 2506 52 7 3 chr20 36169186 36169491 -35984391 - AluSx SINE Alu -6 306 1 30 45 0 0 chr20 36170922 36170966 -35982916 + AT_rich Low_complexity Low_complexity 1 44 0 214 324 178 36 chr20 36170973 36171048 -35982834 + L2 LINE L2 1751 1814 -1500 2152 97 59 0 chr20 36171048 36171337 -35982545 - AluSg SINE Alu -4 306 1 214 324 178 36 chr20 36171337 36171672 -35982210 + L2 LINE L2 1814 2219 -1095 2340 95 0 32 chr20 36171729 36172044 -35981838 + AluSx SINE Alu 1 305 -7 2907 10 0 0 chr20 36172115 36172422 -35981460 - AluYa5 SINE Alu -4 307 1 2562 59 0 7 chr20 36172557 36172863 -35981019 + AluY SINE Alu 1 304 -7 1773 134 36 14 chr20 36172879 36173155 -35980727 + AluJo SINE Alu 13 294 -18 284 323 8 30 chr20 36173190 36173323 -35980559 + L2 LINE L2 2263 2392 -922 575 332 12 43 chr20 36173514 36173571 -35980311 + LTR16A LTR ERVL 1 58 -392 2193 102 0 10 chr20 36173571 36173890 -35979992 + AluSq SINE Alu 1 313 0 575 332 12 43 chr20 36173890 36174085 -35979797 + LTR16A LTR ERVL 58 245 -205 296 292 170 0 chr20 36174130 36174273 -35979609 + LTR16A LTR ERVL 259 452 -12 2198 100 0 4 chr20 36174444 36174773 -35979109 - AluSx SINE Alu 0 330 3 215 304 32 64 chr20 36174788 36174864 -35979018 + L2 LINE L2 2758 2831 -483 2202 100 0 0 chr20 36174864 36175180 -35978702 - AluSg SINE Alu 0 316 1 215 304 32 64 chr20 36175180 36175227 -35978655 + L2 LINE L2 2831 2878 -436 556 288 54 55 chr20 36175375 36175828 -35978054 - LTR67 LTR ERVL -10 547 20 593 152 11 0 chr20 36175916 36176008 -35977874 - AluJb SINE Alu -20 292 200 2436 85 7 0 chr20 36176301 36176607 -35977275 + AluSx SINE Alu 1 308 -4 2322 163 21 14 chr20 36176792 36177215 -35976667 + MSTB LTR MaLR 1 426 0 807 97 44 65 chr20 36177365 36177544 -35976338 + L1M4 LINE L1 5300 5472 -702 5965 149 9 23 chr20 36177547 36178027 -35975855 + L1PB1 LINE L1 4526 5011 -1140 2393 63 3 26 chr20 36178027 36178329 -35975553 + AluY SINE Alu 1 295 -16 5965 149 9 23 chr20 36178329 36179490 -35974392 + L1PB1 LINE L1 5011 6150 -1 2603 158 40 19 chr20 36179498 36179896 -35973986 + L1MB7 LINE L1 5461 5872 -312 2274 94 10 0 chr20 36179896 36180194 -35973688 + AluSp SINE Alu 3 303 -10 2603 158 40 19 chr20 36180194 36180271 -35973611 + L1MB7 LINE L1 5872 5946 -238 2206 110 3 19 chr20 36180274 36180582 -35973300 + AluY SINE Alu 1 303 -8 1566 155 47 4 chr20 36180689 36180831 -35973051 - AluJb SINE Alu -43 269 110 207 0 0 0 chr20 36180831 36180854 -35973028 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1566 155 47 4 chr20 36180854 36180969 -35972913 - AluJb SINE Alu -202 110 1 319 327 0 10 chr20 36181012 36181113 -35972769 - MIR3 SINE MIR -102 106 7 229 257 228 0 chr20 36181350 36181451 -35972431 + MIR3 SINE MIR 79 202 -6 205 357 113 35 chr20 36181777 36182060 -35971822 - L2 LINE L2 -8 3264 2960 * 409 325 48 0 chr20 36182058 36182184 -35971698 + L2 LINE L2 3141 3272 0 4732 123 166 27 chr20 36182417 36183406 -35970476 + MER11B LTR ERVK 2 1232 -4 295 271 0 12 chr20 36183413 36183498 -35970384 + L2 LINE L2 3189 3272 0 514 277 84 6 chr20 36184217 36184383 -35969499 + L3 LINE CR1 1278 1456 -121 392 268 60 30 chr20 36184419 36184471 -35969411 - L3 LINE CR1 -300 1277 1228 2195 119 0 3 chr20 36184471 36184765 -35969117 - AluSc SINE Alu -15 294 2 392 268 60 30 chr20 36184765 36184880 -35969002 - L3 LINE CR1 -349 1228 1105 21 0 0 0 chr20 36184884 36184905 -35968977 + AT_rich Low_complexity Low_complexity 1 21 0 735 274 108 53 chr20 36184944 36185623 -35968259 - L2 LINE L2 -21 3292 2577 2546 219 59 48 chr20 36185623 36185885 -35967997 + L1ME3A LINE L1 5441 5699 -471 4004 111 39 0 chr20 36185885 36186443 -35967439 - LTR19B LTR ERV1 0 580 1 2546 219 59 48 chr20 36186443 36186774 -35967108 + L1ME3A LINE L1 5699 6046 -124 2437 94 0 0 chr20 36186774 36187081 -35966801 - AluSc SINE Alu -2 307 1 2546 219 59 48 chr20 36187081 36187198 -35966684 + L1ME3A LINE L1 6046 6160 -10 2699 229 73 60 chr20 36187211 36188173 -35965709 - L2 LINE L2 -849 2465 1492 1451 238 68 42 chr20 36188335 36188907 -35964975 + L1ME LINE L1 427 1013 -5057 734 178 8 0 chr20 36188913 36189031 -35964851 + 5S rRNA rRNA 1 119 -2 2280 132 0 0 chr20 36189146 36189456 -35964426 + AluSx SINE Alu 1 310 -2 2151 124 7 3 chr20 36189508 36189815 -35964067 + AluSx SINE Alu 3 310 -2 2384 221 65 30 chr20 36189815 36190560 -35963322 + L1ME LINE L1 1017 1790 -4290 15666 115 14 41 chr20 36190567 36190732 -35963150 + Tigger1 DNA MER2_type 1 169 -2249 836 173 0 0 chr20 36190732 36190865 -35963017 - FLAM_C SINE Alu 0 133 1 15666 115 14 41 chr20 36190865 36191155 -35962727 + Tigger1 DNA MER2_type 169 465 -1953 2458 77 0 0 chr20 36191155 36191452 -35962430 + AluSg SINE Alu 7 303 -7 15666 115 14 41 chr20 36191452 36191610 -35962272 + Tigger1 DNA MER2_type 465 626 -1792 2368 80 0 27 chr20 36191610 36191910 -35961972 + AluY SINE Alu 1 292 -19 15666 115 14 41 chr20 36191910 36192325 -35961557 + Tigger1 DNA MER2_type 626 1051 -1367 2193 125 0 3 chr20 36192325 36192621 -35961261 - AluSg SINE Alu -15 295 1 15666 115 14 41 chr20 36192621 36193076 -35960806 + Tigger1 DNA MER2_type 1051 1517 -901 2176 115 3 0 chr20 36193076 36193371 -35960511 + AluSg SINE Alu 1 296 -14 15666 115 14 41 chr20 36193371 36194248 -35959634 + Tigger1 DNA MER2_type 1517 2296 -122 1994 140 7 7 chr20 36194248 36194555 -35959327 - AluSx SINE Alu -5 307 1 15666 115 14 41 chr20 36194555 36194675 -35959207 + Tigger1 DNA MER2_type 2296 2418 0 695 227 39 89 chr20 36194677 36195013 -35958869 + L1ME LINE L1 1838 2154 -4107 2372 97 0 0 chr20 36195013 36195311 -35958571 + AluSx SINE Alu 1 298 -14 695 227 39 89 chr20 36195311 36195357 -35958525 + L1ME LINE L1 2154 2201 -4060 1392 229 42 16 chr20 36195407 36195856 -35958026 + L1ME LINE L1 2304 2764 -3316 1563 142 0 0 chr20 36195863 36196082 -35957800 + AluSg/x SINE Alu 85 303 -9 263 209 0 60 chr20 36196082 36196149 -35957733 + L1MEc LINE L1 2295 2357 -4039 1487 225 24 34 chr20 36196197 36196603 -35957279 + L1MEc LINE L1 2439 2841 -3374 1822 94 8 0 chr20 36196603 36196838 -35957044 + AluSp SINE Alu 1 237 -76 1487 225 24 34 chr20 36196838 36196897 -35956985 + L1MEc LINE L1 2841 2899 -3316 358 62 0 0 chr20 36196904 36196952 -35956930 + AluSp SINE Alu 85 132 -171 372 127 0 0 chr20 36196986 36197049 -35956833 + Tigger1 DNA MER2_type 2253 2315 -103 1321 112 0 0 chr20 36197081 36197251 -35956631 + AluSg/x SINE Alu 140 309 -3 2593 215 29 14 chr20 36197251 36197939 -35955943 + L1MEc LINE L1 2909 3606 -2609 408 125 0 0 chr20 36197948 36198012 -35955870 + (TCCC)n Simple_repeat Simple_repeat 3 66 0 495 198 0 10 chr20 36198031 36198127 -35955755 - AluJb SINE Alu 0 312 218 970 135 7 14 chr20 36198134 36198282 -35955600 - AluJb SINE Alu -165 147 1 1252 221 53 65 chr20 36198282 36198598 -35955284 + L1MEc LINE L1 3594 3905 -2310 2230 106 0 0 chr20 36198598 36198900 -35954982 + AluSx SINE Alu 1 302 0 1252 221 53 65 chr20 36198900 36199056 -35954826 + L1MEc LINE L1 3905 4061 -2154 314 312 0 0 chr20 36199062 36199078 -35954804 + L1MC4 LINE L1 6613 6628 -1414 2251 96 4 0 chr20 36199078 36199359 -35954523 + AluSp SINE Alu 1 282 -31 314 312 0 0 chr20 36199359 36199435 -35954447 + L1MC4 LINE L1 6627 6705 -1337 * 354 292 0 0 chr20 36199369 36199458 -35954424 - L1MC4 LINE L1 -1339 6703 6615 204 179 0 0 chr20 36199459 36199498 -35954384 + (TA)n Simple_repeat Simple_repeat 2 40 0 451 118 0 53 chr20 36199498 36199574 -35954308 - AluS SINE Alu -240 73 2 253 143 0 0 chr20 36199575 36199617 -35954265 + L1ME1 LINE L1 5230 5271 -875 180 0 0 0 chr20 36199636 36199656 -35954226 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 739 171 8 0 chr20 36199658 36199775 -35954107 - AluJb SINE Alu -193 119 2 4027 188 40 27 chr20 36199775 36199801 -35954081 + L1ME1 LINE L1 5261 5285 -881 2305 96 0 7 chr20 36199801 36200102 -35953780 + AluSg SINE Alu 5 303 -7 4027 188 40 27 chr20 36200102 36200962 -35952920 + L1ME1 LINE L1 5285 6158 -8 227 203 16 0 chr20 36200962 36201026 -35952856 + (TA)n Simple_repeat Simple_repeat 1 65 0 2339 109 0 0 chr20 36201132 36201434 -35952448 - AluSx SINE Alu -10 302 1 247 284 260 47 chr20 36202274 36202297 -35951585 - L2 LINE L2 0 3272 3255 2234 107 10 0 chr20 36202297 36202595 -35951287 + AluSx SINE Alu 1 301 -11 247 284 260 47 chr20 36202595 36202698 -35951184 - L2 LINE L2 -17 3255 3119 962 328 73 10 chr20 36202801 36203323 -35950559 - L2 LINE L2 -787 2527 1973 303 186 0 0 chr20 36203489 36203548 -35950334 - Charlie2 DNA MER1_type 0 2862 2804 1895 176 3 0 chr20 36203549 36203851 -35950031 + AluJo SINE Alu 1 303 -9 1894 179 0 7 chr20 36203867 36204169 -35949713 + AluJo SINE Alu 1 300 -12 712 226 115 46 chr20 36204247 36204306 -35949576 - Charlie2 DNA MER1_type -2503 279 225 2271 106 6 10 chr20 36204306 36204617 -35949265 - AluSx SINE Alu -2 310 1 712 226 115 46 chr20 36204617 36204818 -35949064 - Charlie2 DNA MER1_type -2557 225 1 241 246 62 31 chr20 36205115 36205180 -35948702 - MARNA DNA Mariner -9 577 511 2176 122 0 10 chr20 36205336 36205640 -35948242 + AluSq SINE Alu 1 301 -12 230 348 0 35 chr20 36205752 36205867 -35948015 - L2 LINE L2 -222 3050 2940 1027 167 0 11 chr20 36205904 36206084 -35947798 + MER45A DNA AcHobo 1 178 0 264 279 23 23 chr20 36206085 36206171 -35947711 - L2 LINE L2 -652 2662 2577 739 296 29 61 chr20 36206221 36206653 -35947229 - L1P4 LINE L1 -366 5802 5373 2014 143 7 7 chr20 36206653 36206947 -35946935 + AluSx SINE Alu 1 294 -18 739 296 29 61 chr20 36206947 36207054 -35946828 - L1P4 LINE L1 -795 5373 5264 26 0 0 0 chr20 36207051 36207077 -35946805 + AT_rich Low_complexity Low_complexity 1 26 0 * 411 270 26 106 chr20 36207307 36207396 -35946486 - L1MC4a LINE L1 -1634 6174 6079 2084 147 0 3 chr20 36207396 36207709 -35946173 + AluSx SINE Alu 1 312 0 411 270 26 106 chr20 36207709 36208009 -35945873 - L1MC4a LINE L1 -1729 6079 5819 2489 60 0 10 chr20 36208009 36208311 -35945571 + AluY SINE Alu 1 299 -12 411 270 26 106 chr20 36208311 36208346 -35945536 - L1MC4a LINE L1 -1989 5819 5783 2410 86 0 13 chr20 36208501 36208815 -35945067 - AluSx SINE Alu -2 310 1 206 228 54 87 chr20 36208951 36209043 -35944839 + L2 LINE L2 3012 3100 -172 384 279 224 0 chr20 36209220 36209381 -35944501 + MIR SINE MIR 16 212 -50 2488 83 3 0 chr20 36209520 36209832 -35944050 + AluSp SINE Alu 1 313 0 1267 196 0 0 chr20 36210285 36210504 -35943378 + AluJo SINE Alu 91 309 -3 207 69 0 0 chr20 36210515 36210544 -35943338 + (TAAAAA)n Simple_repeat Simple_repeat 2 30 0 3075 228 125 21 chr20 36210625 36211532 -35942350 + L2 LINE L2 1455 2455 -859 348 232 37 0 chr20 36211955 36212037 -35941845 + L2 LINE L2 2465 2549 -765 1183 256 103 47 chr20 36212098 36212308 -35941574 + L2 LINE L2 2528 2725 -588 1028 204 6 118 chr20 36212308 36212637 -35941245 - AluJo SINE Alu -10 292 1 1183 256 103 47 chr20 36212637 36212921 -35940961 + L2 LINE L2 2725 2992 -321 180 0 0 0 chr20 36212921 36212941 -35940941 + (TC)n Simple_repeat Simple_repeat 1 20 0 1183 256 103 47 chr20 36212941 36213065 -35940817 + L2 LINE L2 2992 3108 -205 2226 117 0 3 chr20 36213065 36213393 -35940489 - AluSx SINE Alu 0 327 1 1183 256 103 47 chr20 36213393 36213519 -35940363 + L2 LINE L2 3108 3304 -9 249 118 78 20 chr20 36213589 36213640 -35940242 - Charlie1b DNA MER1_type -5 518 465 1072 181 0 0 chr20 36213640 36213806 -35940076 + FRAM SINE Alu 1 166 0 2233 108 0 20 chr20 36213813 36214119 -35939763 + AluSg SINE Alu 1 300 -10 1367 161 63 67 chr20 36214119 36214549 -35939333 - Charlie1b DNA MER1_type -22 501 74 295 371 127 22 chr20 36214586 36214861 -35939021 + L2 LINE L2 2969 3272 0 2263 114 3 0 chr20 36214865 36215163 -35938719 + AluSq SINE Alu 1 299 -14 1889 160 0 32 chr20 36215230 36215542 -35938340 - AluJb SINE Alu -10 302 1 2156 105 44 0 chr20 36215555 36215849 -35938033 - AluSx SINE Alu 0 312 6 1614 37 0 0 chr20 36215899 36216087 -35937795 + L1PA3 LINE L1 5968 6155 0 7230 33 1 1 chr20 36216092 36216965 -35936917 + L1PA4 LINE L1 5293 6165 0 430 284 122 7 chr20 36217043 36217191 -35936691 - MIR3 SINE MIR -24 184 20 2078 148 3 0 chr20 36217792 36218095 -35935787 - AluSx SINE Alu -8 304 1 623 301 93 18 chr20 36218564 36218790 -35935092 + MIR SINE MIR 20 262 0 207 254 55 36 chr20 36218965 36219020 -35934862 - MIR SINE MIR -187 75 20 263 28 28 0 chr20 36219081 36219117 -35934765 + (CA)n Simple_repeat Simple_repeat 2 38 0 202 322 24 97 chr20 36219256 36219629 -35934253 + L2 LINE L2 2922 3267 -5 21 82 0 0 chr20 36219724 36219773 -35934109 + GC_rich Low_complexity Low_complexity 1 49 0 896 249 62 40 chr20 36220052 36220325 -35933557 + L3 LINE CR1 1190 1468 -109 1187 241 15 11 chr20 36220386 36220647 -35933235 - MIR SINE MIR 0 262 1 507 312 6 13 chr20 36221188 36221345 -35932537 + MIR3 SINE MIR 11 166 -42 238 245 0 0 chr20 36221885 36221934 -35931948 + CT-rich Low_complexity Low_complexity 4 52 0 2281 99 0 0 chr20 36222663 36222990 -35930892 - AluSx SINE Alu 0 327 1 251 269 131 69 chr20 36223372 36223532 -35930350 - MIR3 SINE MIR -5 203 34 211 338 0 0 chr20 36224166 36224243 -35929639 - L3b LINE CR1 -190 1393 1317 295 281 18 44 chr20 36224311 36224425 -35929457 - MIR SINE MIR -60 202 92 2169 114 31 0 chr20 36224470 36224759 -35929123 + AluSx SINE Alu 1 298 -14 231 313 15 0 chr20 36225026 36225093 -35928789 + L2 LINE L2 3242 3309 -4 180 232 110 73 chr20 36225092 36225174 -35928708 + L2 LINE L2 3229 3313 0 * 342 331 73 49 chr20 36225187 36225575 -35928307 - L2 LINE L2 -153 3119 2704 304 111 93 0 chr20 36225684 36225738 -35928144 - AluJ/FLAM SINE Alu -230 72 14 1451 154 36 9 chr20 36225883 36226104 -35927778 + AluSx SINE Alu 59 285 -27 198 71 0 0 chr20 36226104 36226132 -35927750 + (CAAT)n Simple_repeat Simple_repeat 2 29 0 22 35 0 0 chr20 36226243 36226272 -35927610 + AT_rich Low_complexity Low_complexity 1 29 0 235 256 12 24 chr20 36226374 36226456 -35927426 - L1MC5 LINE L1 -32 7929 7849 1602 149 0 4 chr20 36226458 36226700 -35927182 + AluJb SINE Alu 57 297 -15 524 320 72 20 chr20 36226704 36227101 -35926781 + L2 LINE L2 2784 3212 -101 373 307 55 60 chr20 36227227 36227445 -35926437 - L2 LINE L2 -266 3047 2831 1030 178 0 0 chr20 36227462 36227619 -35926263 + FRAM SINE Alu 2 158 -8 206 245 19 19 chr20 36227767 36227820 -35926062 - MIR3 SINE MIR -38 170 118 1928 156 0 0 chr20 36227835 36228111 -35925771 + AluJb SINE Alu 14 289 -23 2268 109 0 7 chr20 36228114 36228408 -35925474 + AluSq SINE Alu 1 292 -21 25 0 0 0 chr20 36228408 36228433 -35925449 + AT_rich Low_complexity Low_complexity 1 25 0 467 341 12 12 chr20 36228940 36229107 -35924775 + MIR3 SINE MIR 4 170 -38 272 222 34 111 chr20 36229345 36229392 -35924490 - MIR SINE MIR -81 127 78 2500 89 0 0 chr20 36229392 36229696 -35924186 + AluSx SINE Alu 1 304 -8 272 222 34 111 chr20 36229696 36229765 -35924117 - MIR SINE MIR -130 78 20 2510 175 47 2 chr20 36229841 36230310 -35923572 - MLT1D LTR MaLR -15 490 1 342 291 110 0 chr20 36230311 36230438 -35923444 - MIR SINE MIR -62 200 60 233 364 127 0 chr20 36230960 36231078 -35922804 - L2 LINE L2 -38 3234 3102 719 207 89 10 chr20 36231337 36231540 -35922342 + L2 LINE L2 2923 3141 -172 934 137 123 52 chr20 36231589 36231741 -35922141 - AluJo SINE Alu -2 310 137 2317 78 27 10 chr20 36231741 36232037 -35921845 - AluSc SINE Alu -8 301 1 934 137 123 52 chr20 36232037 36232095 -35921787 - AluJo SINE Alu -175 137 85 398 187 67 0 chr20 36232106 36232181 -35921701 + L2 LINE L2 3229 3308 -5 1670 125 90 35 chr20 36232245 36232534 -35921348 + AluJo SINE Alu 7 311 -1 242 357 10 0 chr20 36232538 36232636 -35921246 - L2 LINE L2 -815 2499 2401 186 287 50 79 chr20 36233355 36233456 -35920426 - L2 LINE L2 -9 3304 3207 708 310 61 58 chr20 36233484 36233829 -35920053 - L2 LINE L2 -1 3271 2926 231 61 0 0 chr20 36234002 36234035 -35919847 + (CA)n Simple_repeat Simple_repeat 2 34 0 2270 99 0 3 chr20 36234760 36235054 -35918828 + AluSx SINE Alu 12 304 -8 2373 103 0 3 chr20 36235596 36235897 -35917985 + AluSx SINE Alu 1 300 -12 378 324 57 72 chr20 36235897 36236215 -35917667 + L2 LINE L2 2953 3265 -7 523 306 125 53 chr20 36236219 36236312 -35917570 - L2 LINE L2 -22 3250 3165 258 32 0 0 chr20 36236312 36236343 -35917539 + (GGA)n Simple_repeat Simple_repeat 1 31 0 523 306 125 53 chr20 36236343 36236586 -35917296 - L2 LINE L2 -107 3165 2890 2464 83 3 0 chr20 36237140 36237440 -35916442 - AluSq SINE Alu -12 301 1 254 189 53 152 chr20 36237660 36237718 -35916164 - L1MC4 LINE L1 -6 8036 7974 204 40 0 0 chr20 36237718 36237743 -35916139 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 1749 188 0 0 chr20 36237745 36238027 -35915855 - AluJo SINE Alu -30 282 1 254 189 53 152 chr20 36238027 36238097 -35915785 - L1MC4 LINE L1 -69 7973 7918 205 162 0 0 chr20 36238127 36238151 -35915731 + (TA)n Simple_repeat Simple_repeat 1 27 -10 2237 124 0 0 chr20 36238151 36238449 -35915433 - AluSx SINE Alu -14 298 1 205 162 0 0 chr20 36238449 36238461 -35915421 + (TA)n Simple_repeat Simple_repeat 26 37 0 349 174 12 47 chr20 36238524 36238610 -35915272 - L1MC4 LINE L1 -161 7881 7799 356 236 110 77 chr20 36238613 36238795 -35915087 - L1ME4a LINE L1 -126 5995 5808 2213 85 0 75 chr20 36238873 36239192 -35914690 + AluSc SINE Alu 1 295 -14 545 248 32 28 chr20 36239851 36240006 -35913876 + MIR3 SINE MIR 48 204 -4 195 214 24 0 chr20 36240086 36240128 -35913754 - L2 LINE L2 -1 3271 3229 226 319 144 64 chr20 36240206 36240818 -35913064 - L2 LINE L2 -1108 2206 1546 269 203 62 0 chr20 36240928 36240992 -35912890 + MIR3 SINE MIR 106 173 -35 2324 93 3 10 chr20 36241007 36241308 -35912574 - AluSx SINE Alu -13 299 1 201 196 59 0 chr20 36241876 36241927 -35911955 + MIR SINE MIR 78 131 -77 369 201 75 107 chr20 36242194 36242289 -35911593 + MIR SINE MIR 48 144 -118 2499 53 0 16 chr20 36242289 36242593 -35911289 - AluY SINE Alu -12 299 1 369 201 75 107 chr20 36242593 36242642 -35911240 + MIR SINE MIR 144 189 -73 1608 189 25 7 chr20 36242642 36242953 -35910929 - AluJb SINE Alu 0 312 1 369 201 75 107 chr20 36242953 36242966 -35910916 + MIR SINE MIR 189 201 -61 2367 115 0 10 chr20 36242979 36243293 -35910589 + AluSx SINE Alu 2 312 0 1496 135 157 22 chr20 36243293 36243602 -35910280 - MSTA LTR MaLR -33 395 40 272 311 84 34 chr20 36243617 36243736 -35910146 - L2 LINE L2 -12 3260 3136 2121 135 0 19 chr20 36243814 36244125 -35909757 - AluSq SINE Alu -8 305 1 232 265 29 0 chr20 36244125 36244184 -35909698 - L2 LINE L2 -523 2791 2728 359 293 43 35 chr20 36244211 36244389 -35909493 - MIR SINE MIR -51 211 31 541 138 11 11 chr20 36245051 36245145 -35908737 + AluJ/FRAM SINE Alu 214 307 -5 340 215 35 58 chr20 36245448 36245620 -35908262 + (CTGGGG)n Simple_repeat Simple_repeat 6 173 0 401 211 22 67 chr20 36245640 36245820 -35908062 + (CTGGGG)n Simple_repeat Simple_repeat 2 173 0 225 0 0 0 chr20 36245971 36245996 -35907886 + (T)n Simple_repeat Simple_repeat 1 25 0 278 257 99 48 chr20 36246161 36246287 -35907595 + MIR SINE MIR 23 172 -63 2422 87 3 0 chr20 36246571 36246871 -35907011 - AluSq SINE Alu -12 301 1 2437 91 0 0 chr20 36247751 36248047 -35905835 + AluSq SINE Alu 1 296 -17 394 176 15 0 chr20 36248464 36248532 -35905350 + MIR3 SINE MIR 119 187 -21 667 291 0 19 chr20 36248910 36249068 -35904814 - MIR SINE MIR -101 161 7 461 235 30 105 chr20 36249076 36249140 -35904742 - MER5A DNA MER1_type -3 186 119 2407 79 20 0 chr20 36249140 36249443 -35904439 + AluSq SINE Alu 1 309 -4 461 235 30 105 chr20 36249443 36249578 -35904304 - MER5A DNA MER1_type -70 119 2 211 304 0 14 chr20 36249613 36249682 -35904200 - MER5A DNA MER1_type -24 165 98 242 173 58 0 chr20 36250141 36250193 -35903689 - L2 LINE L2 -12 3301 3247 1239 249 83 37 chr20 36250736 36251464 -35902418 - L1MC5 LINE L1 -30 7931 7260 2244 82 0 4 chr20 36251624 36251904 -35901978 + AluSx SINE Alu 25 303 -9 198 274 36 36 chr20 36251954 36252038 -35901844 - MER5A DNA MER1_type -103 86 3 285 260 89 112 chr20 36252086 36252344 -35901538 - L2 LINE L2 -88 3184 2933 631 254 142 10 chr20 36252572 36252769 -35901113 - MIR SINE MIR -32 230 8 446 221 177 44 chr20 36254069 36254250 -35899632 - MIR SINE MIR -52 210 6 2388 98 0 3 chr20 36254498 36254804 -35899078 - AluSx SINE Alu -7 305 1 8463 57 1 0 chr20 36254826 36255794 -35898088 - LTR5 LTR ERVK 0 969 1 304 270 145 98 chr20 36255794 36256429 -35897453 + L2 LINE L2 2598 3269 -3 224 307 0 13 chr20 36256903 36256978 -35896904 + CT-rich Low_complexity Low_complexity 1 74 0 2311 98 0 49 chr20 36257112 36257439 -35896443 + AluSx SINE Alu 1 311 -1 422 282 26 39 chr20 36257715 36257871 -35896011 - L2 LINE L2 -742 2572 2419 1988 75 4 4 chr20 36257901 36258156 -35895726 + AluSx SINE Alu 42 296 -16 23 97 0 0 chr20 36258225 36258297 -35895585 + AT_rich Low_complexity Low_complexity 1 72 0 910 83 0 56 chr20 36258297 36258441 -35895441 + AluJo SINE Alu 1 136 -176 512 183 0 67 chr20 36258485 36258605 -35895277 - MER3 DNA MER1_type -97 112 1 240 133 0 22 chr20 36258610 36258649 -35895233 - L2 LINE L2 -1100 2214 2177 525 193 20 139 chr20 36258649 36258760 -35895122 - MER5B DNA MER1_type 0 178 100 2125 98 0 50 chr20 36258760 36259078 -35894804 + AluSx SINE Alu 5 306 -6 525 193 20 139 chr20 36259078 36259168 -35894714 - MER5B DNA MER1_type -78 100 1 473 197 92 21 chr20 36259170 36259312 -35894570 - L2 LINE L2 -1132 2182 2031 574 238 143 36 chr20 36259338 36259506 -35894376 + MER5A DNA MER1_type 4 189 0 186 236 55 45 chr20 36259506 36259611 -35894271 - L2 LINE L2 -1417 1897 1792 199 342 59 0 chr20 36260376 36260478 -35893404 + MIR SINE MIR 87 193 -58 1007 304 65 12 chr20 36260648 36261066 -35892816 - LTR16A LTR ERVL 0 450 11 224 326 70 0 chr20 36261126 36261212 -35892670 + MIR SINE MIR 24 115 -93 215 191 22 101 chr20 36261358 36261447 -35892435 - MIR SINE MIR -69 193 112 2403 75 0 3 chr20 36261447 36261752 -35892130 + AluY SINE Alu 1 304 -7 218 380 0 0 chr20 36261852 36261931 -35891951 - MIR SINE MIR -5 257 179 188 293 12 61 chr20 36262641 36262723 -35891159 + MIR3 SINE MIR 111 188 -20 197 345 36 43 chr20 36263159 36263298 -35890584 - L2 LINE L2 -457 2857 2720 2204 105 0 0 chr20 36263460 36263754 -35890128 + AluSp SINE Alu 1 294 -19 1765 157 3 20 chr20 36264938 36265232 -35888650 - AluJo SINE Alu -15 297 9 623 281 81 30 chr20 36265422 36265657 -35888225 + MIR SINE MIR 15 261 -1 1907 138 0 14 chr20 36265841 36266123 -35887759 + AluJo SINE Alu 29 306 -6 194 327 118 20 chr20 36269044 36269197 -35884685 - MIR SINE MIR -14 248 81 499 73 16 73 chr20 36270472 36270595 -35883287 + (CTGGGG)n Simple_repeat Simple_repeat 2 117 0 21 0 0 0 chr20 36270607 36270628 -35883254 + GC_rich Low_complexity Low_complexity 1 21 0 804 135 32 0 chr20 36271181 36271307 -35882575 + AluJ SINE Alu 1 130 -172 719 186 0 0 chr20 36271308 36271432 -35882450 + AluJ SINE Alu 184 307 -5 2554 44 0 19 chr20 36273814 36274130 -35879752 + AluY SINE Alu 2 311 0 1052 240 26 58 chr20 36274131 36274166 -35879716 + L1ME3A LINE L1 5438 5473 -697 2014 133 3 3 chr20 36274166 36274460 -35879422 - AluSx SINE Alu -18 294 1 1052 240 26 58 chr20 36274460 36274705 -35879177 + L1ME3A LINE L1 5473 5703 -467 2384 70 0 3 chr20 36274705 36275003 -35878879 - AluY SINE Alu -14 297 1 1052 240 26 58 chr20 36275003 36275137 -35878745 + L1ME3A LINE L1 5703 5840 -330 1933 115 0 18 chr20 36275307 36275586 -35878296 - AluSp SINE Alu -1 312 39 26 50 0 0 chr20 36275597 36275637 -35878245 + AT_rich Low_complexity Low_complexity 1 40 0 197 306 20 41 chr20 36275650 36275724 -35878158 + L3 LINE CR1 1302 1375 -202 2179 79 26 10 chr20 36275724 36276029 -35877853 + AluSq SINE Alu 1 310 -3 197 306 20 41 chr20 36276029 36276052 -35877830 + L3 LINE CR1 1375 1397 -180 1730 195 0 3 chr20 36276232 36276539 -35877343 + AluJo SINE Alu 1 306 -6 263 331 87 8 chr20 36276558 36276685 -35877197 + MIR SINE MIR 76 212 -50 404 151 0 12 chr20 36278563 36278649 -35875233 + (ATG)n Simple_repeat Simple_repeat 1 85 0 189 260 62 83 chr20 36278673 36278865 -35875017 + L2 LINE L2 2872 3059 -213 288 0 0 0 chr20 36279069 36279101 -35874781 + (TG)n Simple_repeat Simple_repeat 2 33 0 201 277 92 0 chr20 36280885 36280950 -35872932 + MIR3 SINE MIR 117 187 -21 250 290 0 14 chr20 36281036 36281105 -35872777 + L2 LINE L2 3205 3272 0 1349 136 35 84 chr20 36281881 36282051 -35871831 - AluJo SINE Alu -17 295 143 2154 120 7 0 chr20 36282051 36282351 -35871531 - AluSg SINE Alu -8 302 1 1349 136 35 84 chr20 36282351 36282467 -35871415 - AluJo SINE Alu -169 143 23 558 303 30 6 chr20 36283087 36283252 -35870630 + MIR SINE MIR 31 199 -63 338 229 35 112 chr20 36283964 36284134 -35869748 + MIR3 SINE MIR 16 172 -36 483 187 37 0 chr20 36284390 36284497 -35869385 + MIR3 SINE MIR 52 162 -46 195 100 0 0 chr20 36285422 36285452 -35868430 + (CA)n Simple_repeat Simple_repeat 2 31 0 204 254 0 36 chr20 36285909 36285964 -35867918 - MER5A DNA MER1_type -46 143 91 1877 158 3 19 chr20 36285983 36286293 -35867589 - AluJo SINE Alu -7 305 1 533 194 0 20 chr20 36286294 36286392 -35867490 - FRAM SINE Alu -14 162 67 2561 148 29 65 chr20 36287415 36287468 -35866414 - L1MB3 LINE L1 -1 6182 6129 2123 115 0 13 chr20 36287468 36287773 -35866109 + AluSx SINE Alu 1 301 -11 779 168 0 0 chr20 36287773 36287892 -35865990 - AluJo/FLAM SINE Alu -183 119 1 2561 148 29 65 chr20 36287892 36288356 -35865526 - L1MB3 LINE L1 -52 6131 5683 206 289 10 21 chr20 36288497 36288594 -35865288 + (TG)n Simple_repeat Simple_repeat 1 96 0 370 324 108 0 chr20 36289744 36289948 -35863934 + MIR SINE MIR 28 253 -9 336 188 62 0 chr20 36290373 36290437 -35863445 - L2 LINE L2 -93 3179 3112 2299 93 0 10 chr20 36292009 36292320 -35861562 + AluSq SINE Alu 1 308 -5 22 0 0 0 chr20 36293529 36293551 -35860331 + AT_rich Low_complexity Low_complexity 1 22 0 1926 143 28 0 chr20 36293653 36293940 -35859942 - AluJo SINE Alu -17 295 1 366 327 31 38 chr20 36294284 36294443 -35859439 - L2 LINE L2 0 3272 3115 312 194 16 0 chr20 36294464 36294526 -35859356 + AluJ/FLAM SINE Alu 1 63 -239 456 323 12 18 chr20 36294959 36295123 -35858759 + L3 LINE CR1 1413 1575 -2 333 357 30 18 chr20 36297160 36297328 -35856554 + MIR SINE MIR 39 208 -54 272 299 159 45 chr20 36297777 36297978 -35855904 + L2 LINE L2 3044 3267 -5 182 242 91 0 chr20 36298738 36298804 -35855078 - L2 LINE L2 -2551 763 692 199 324 44 0 chr20 36299060 36299128 -35854754 + L2 LINE L2 3200 3270 -2 316 229 145 61 chr20 36299628 36299759 -35854123 - MIR3 SINE MIR -9 199 58 564 269 41 18 chr20 36300557 36300728 -35853154 + MIR SINE MIR 17 191 -71 2089 107 4 4 chr20 36301417 36301727 -35852155 - AluSx SINE Alu 0 310 1 226 184 41 0 chr20 36301729 36301778 -35852104 - MIR SINE MIR -114 148 98 1667 152 7 7 chr20 36301892 36302162 -35851720 + AluJb SINE Alu 30 299 -13 292 339 102 0 chr20 36302491 36302609 -35851273 - L2 LINE L2 -5 3308 3179 468 286 201 28 chr20 36302693 36302976 -35850906 + L2 LINE L2 2982 3313 0 2311 86 0 10 chr20 36303078 36303381 -35850501 + AluSc SINE Alu 4 303 -6 2238 88 0 20 chr20 36303406 36303711 -35850171 - AluY SINE Alu -12 299 1 617 157 216 0 chr20 36304079 36304232 -35849650 + MER3 DNA MER1_type 1 186 -23 471 269 154 0 chr20 36304257 36304413 -35849469 + MER5A DNA MER1_type 9 188 -1 483 250 64 14 chr20 36304421 36304561 -35849321 + MER5B DNA MER1_type 21 167 -11 231 333 109 14 chr20 36304563 36304701 -35849181 + MER5B DNA MER1_type 20 170 -8 1897 133 18 18 chr20 36305466 36305803 -35848079 + L1MB3 LINE L1 5847 6183 0 2500 68 0 0 chr20 36305808 36306115 -35847767 + AluY SINE Alu 1 307 -4 292 268 95 45 chr20 36306115 36306294 -35847588 + L1MC4a LINE L1 5821 6008 -1800 1842 128 42 21 chr20 36306332 36306621 -35847261 - AluSx SINE Alu -17 295 1 2088 101 44 0 chr20 36306668 36306965 -35846917 - AluSx SINE Alu -2 310 1 324 344 89 67 chr20 36307704 36308120 -35845762 - L2 LINE L2 -23 3249 2825 2011 121 21 3 chr20 36308322 36308612 -35845270 + AluJb SINE Alu 1 295 -17 341 254 88 18 chr20 36309045 36309159 -35844723 - MIR3 SINE MIR -86 122 1 211 356 0 33 chr20 36309252 36309342 -35844540 + MIR SINE MIR 17 103 -105 2428 77 0 0 chr20 36309353 36309651 -35844231 - AluY SINE Alu -13 298 1 2341 84 0 7 chr20 36309653 36309951 -35843931 - AluSx SINE Alu -16 296 1 319 296 45 23 chr20 36310338 36310470 -35843412 + L2 LINE L2 3138 3272 0 499 285 97 0 chr20 36310918 36311083 -35842799 - MIR3 SINE MIR -24 184 4 455 310 98 10 chr20 36312957 36313160 -35840722 - MIR SINE MIR -8 254 34 288 0 0 0 chr20 36313966 36313998 -35839884 + (TG)n Simple_repeat Simple_repeat 1 32 0 654 217 0 0 chr20 36314287 36314407 -35839475 + FLAM_C SINE Alu 2 121 -22 344 217 5 162 chr20 36315050 36315165 -35838717 - MIR SINE MIR -64 198 125 2123 123 10 3 chr20 36315165 36315475 -35838407 + AluSx SINE Alu 1 312 0 344 217 5 162 chr20 36315475 36315557 -35838325 - MIR SINE MIR -137 125 32 2509 58 0 0 chr20 36315566 36315860 -35838022 - AluY SINE Alu -17 294 1 753 199 0 0 chr20 36316686 36316817 -35837065 + FLAM_C SINE Alu 1 131 -2 225 322 78 11 chr20 36316903 36316993 -35836889 + LTR67 LTR ERVL 429 524 -33 * 389 96 0 0 chr20 36316985 36317037 -35836845 - AluSg/x SINE Alu -117 183 132 2452 73 0 0 chr20 36317037 36317339 -35836543 - AluY SINE Alu -9 302 1 3943 162 22 23 chr20 36317356 36318085 -35835797 + L1MB4 LINE L1 5450 6177 -3 311 361 66 0 chr20 36318268 36318390 -35835492 - L2 LINE L2 -9 3263 3134 180 143 0 0 chr20 36318564 36318606 -35835276 + (A)n Simple_repeat Simple_repeat 1 42 0 342 281 26 35 chr20 36320128 36320242 -35833640 - MIR SINE MIR -75 133 21 2196 123 3 7 chr20 36320431 36320741 -35833141 + AluSx SINE Alu 1 309 -3 639 219 71 71 chr20 36321140 36321364 -35832518 - MIR SINE MIR -37 225 2 316 270 60 0 chr20 36321810 36321910 -35831972 - L2 LINE L2 -9 3304 3199 295 172 31 16 chr20 36322763 36322827 -35831055 - L2 LINE L2 0 3313 3249 221 311 66 28 chr20 36322980 36323086 -35830796 + MIR3 SINE MIR 58 167 -41 22 0 0 0 chr20 36324108 36324130 -35829752 + AT_rich Low_complexity Low_complexity 1 22 0 254 301 90 38 chr20 36324398 36324531 -35829351 - L2 LINE L2 -8 3264 3125 432 279 169 10 chr20 36324591 36324792 -35829090 - MIR SINE MIR -2 260 28 429 299 40 11 chr20 36325867 36326044 -35827838 + MIR SINE MIR 59 240 -22 347 311 187 42 chr20 36327152 36327441 -35826441 + L2 LINE L2 2922 3252 -20 211 238 350 0 chr20 36327567 36327647 -35826235 - MIR3 SINE MIR -4 204 97 1054 191 37 25 chr20 36327908 36328149 -35825733 + L1MB7 LINE L1 5585 5828 -356 1669 165 106 3 chr20 36328199 36328538 -35825344 + L1MB7 LINE L1 5811 6184 0 647 173 63 24 chr20 36328610 36328737 -35825145 + AluJb SINE Alu 2 133 -179 343 284 39 10 chr20 36328874 36328976 -35824906 + MIR SINE MIR 4 108 -154 1955 203 96 36 chr20 36328983 36329452 -35824430 + MLT1D LTR MaLR 4 500 -5 414 227 60 40 chr20 36329452 36329602 -35824280 + MIR SINE MIR 110 262 0 544 162 61 74 chr20 36329823 36329902 -35823980 - MER5A DNA MER1_type -36 153 75 2284 117 0 0 chr20 36329902 36330200 -35823682 - AluSg SINE Alu -12 298 1 544 162 61 74 chr20 36330200 36330268 -35823614 - MER5A DNA MER1_type -114 75 8 461 298 7 14 chr20 36331104 36331245 -35822637 + MIR3 SINE MIR 16 155 -53 2175 107 6 22 chr20 36331278 36331595 -35822287 + AluSx SINE Alu 1 312 0 27 0 0 0 chr20 36331595 36331622 -35822260 + AT_rich Low_complexity Low_complexity 1 27 0 215 344 147 6 chr20 36332103 36332266 -35821616 - L2 LINE L2 -222 3050 2865 321 136 80 57 chr20 36332461 36332549 -35821333 + L1MC4 LINE L1 7867 7956 -86 542 195 54 27 chr20 36332575 36332724 -35821158 - L1MC4 LINE L1 -97 7945 7793 881 221 23 0 chr20 36333236 36333408 -35820474 - AluJo SINE Alu -50 262 87 393 121 0 47 chr20 36333640 36333722 -35820160 + AluS SINE Alu 2 62 -237 200 330 126 39 chr20 36434021 36434124 -35719758 - MIR3 SINE MIR -53 155 44 207 0 0 0 chr20 36434139 36434162 -35719720 + (TG)n Simple_repeat Simple_repeat 2 24 0 450 333 20 15 chr20 36434188 36434389 -35719493 + L2 LINE L2 2857 3058 -214 1183 97 11 17 chr20 36434461 36434637 -35719245 - AluSg/x SINE Alu -9 303 129 214 363 40 24 chr20 36434682 36434806 -35719076 + L2 LINE L2 3173 3298 -15 268 210 16 16 chr20 36434948 36435010 -35718872 + L3 LINE CR1 1407 1468 -109 461 329 19 6 chr20 36436741 36436899 -35716983 + MIR SINE MIR 71 230 -32 1857 136 0 45 chr20 36436922 36437232 -35716650 + AluJb SINE Alu 1 296 -16 240 193 64 83 chr20 36438539 36438648 -35715234 + MIR3 SINE MIR 81 187 -21 215 81 54 0 chr20 36439059 36439096 -35714786 + GA-rich Low_complexity Low_complexity 2 40 0 1091 152 11 11 chr20 36439380 36439558 -35714324 + L1MB3 LINE L1 6004 6181 -2 251 252 68 39 chr20 36439558 36439661 -35714221 + MER5A DNA MER1_type 66 171 -18 239 253 168 0 chr20 36439677 36439772 -35714110 + MIR SINE MIR 131 241 -21 190 356 14 0 chr20 36439856 36439929 -35713953 - L3 LINE CR1 -122 1455 1382 293 218 115 13 chr20 36441024 36441102 -35712780 - MIR SINE MIR -58 150 65 621 243 92 10 chr20 36441203 36441409 -35712473 - MIR SINE MIR -12 250 28 532 296 45 0 chr20 36443207 36443386 -35710496 - MIR SINE MIR -37 225 39 521 42 14 0 chr20 36443563 36443635 -35710247 + (TG)n Simple_repeat Simple_repeat 1 73 0 498 280 21 0 chr20 36444067 36444210 -35709672 + MIR SINE MIR 117 262 0 4776 220 30 45 chr20 36444543 36444701 -35709181 - L1MB8 LINE L1 -6 6408 6249 1996 124 7 0 chr20 36444701 36444999 -35708883 - AluSx SINE Alu -12 300 1 4776 220 30 45 chr20 36444999 36445677 -35708205 - L1MB8 LINE L1 -165 6249 5562 2703 159 45 12 chr20 36445677 36446187 -35707695 - L1MB3 LINE L1 -2 6181 5655 4776 220 30 45 chr20 36446187 36446331 -35707551 - L1MB8 LINE L1 -852 5562 5417 867 238 0 0 chr20 36446331 36446491 -35707391 - FRAM SINE Alu -6 160 1 4776 220 30 45 chr20 36446491 36447859 -35706023 - L1MB8 LINE L1 -997 5417 1269 809 272 5 5 chr20 36448470 36448672 -35705210 - MIR SINE MIR -41 221 20 229 324 81 0 chr20 36448690 36448764 -35705118 + L1MC3 LINE L1 6704 6783 -1002 375 353 20 13 chr20 36449880 36450030 -35703852 - L2 LINE L2 -5 3308 3158 626 156 62 129 chr20 36450140 36450178 -35703704 - ORSL DNA AcHobo -36 239 200 2293 107 0 0 chr20 36450178 36450487 -35703395 - AluSx SINE Alu -3 309 1 626 156 62 129 chr20 36450487 36450612 -35703270 - ORSL DNA AcHobo -75 200 68 583 62 18 26 chr20 36450612 36450725 -35703157 + (TA)n Simple_repeat Simple_repeat 2 113 0 2192 109 0 0 chr20 36450725 36451029 -35702853 - AluSx SINE Alu -8 304 1 626 156 62 129 chr20 36451029 36451119 -35702763 - ORSL DNA AcHobo -205 70 1 2176 121 0 6 chr20 36452369 36452684 -35701198 + AluSq SINE Alu 1 313 0 436 175 21 0 chr20 36452804 36452901 -35700981 + GA-rich Low_complexity Low_complexity 4 102 0 192 333 0 16 chr20 36453047 36453110 -35700772 + L2 LINE L2 3208 3269 -3 783 236 14 33 chr20 36453257 36453469 -35700413 + MIR SINE MIR 22 229 -33 1952 122 22 0 chr20 36453507 36453818 -35700064 - AluSx SINE Alu 0 317 1 222 182 0 23 chr20 36454580 36454624 -35699258 + L2 LINE L2 3017 3059 -213 201 320 110 10 chr20 36454869 36454969 -35698913 + MIR SINE MIR 35 144 -118 187 318 0 0 chr20 36454998 36455042 -35698840 + L2 LINE L2 3210 3253 -19 205 240 40 0 chr20 36455245 36455295 -35698587 + (CATG)n Simple_repeat Simple_repeat 1 52 0 253 335 90 0 chr20 36455295 36455462 -35698420 + L2 LINE L2 2902 3083 -189 399 332 30 25 chr20 36455908 36456107 -35697775 + MIR SINE MIR 22 221 -41 216 231 19 0 chr20 36456655 36456707 -35697175 + CT-rich Low_complexity Low_complexity 2 54 0 207 256 195 0 chr20 36456713 36456795 -35697087 - MIR SINE MIR -152 110 13 267 268 0 0 chr20 36457241 36457297 -35696585 + MIR SINE MIR 204 259 -3 862 209 87 0 chr20 36457408 36457614 -35696268 - MIR SINE MIR -20 242 19 281 274 49 29 chr20 36457721 36457823 -35696059 - MIR SINE MIR -83 125 22 220 403 0 17 chr20 36458019 36458138 -35695744 + MIR SINE MIR 82 198 -64 384 223 10 68 chr20 36458229 36458332 -35695550 + MER5A DNA MER1_type 9 105 -84 225 330 99 0 chr20 36458751 36458842 -35695040 + L3b LINE CR1 1288 1387 -196 227 343 78 10 chr20 36458921 36459023 -35694859 - MIR3 SINE MIR -22 186 78 232 200 120 53 chr20 36459376 36459451 -35694431 + MIR3 SINE MIR 81 160 -48 377 312 71 24 chr20 36459451 36459621 -35694261 - MER5B DNA MER1_type 0 178 1 243 0 0 0 chr20 36460509 36460536 -35693346 + (TC)n Simple_repeat Simple_repeat 1 27 0 213 121 0 0 chr20 36460536 36460569 -35693313 + (CA)n Simple_repeat Simple_repeat 2 34 0 255 301 226 0 chr20 36460573 36460666 -35693216 - MIR SINE MIR -63 145 32 409 236 152 36 chr20 36460949 36461114 -35692768 + MIR SINE MIR 9 192 -70 423 320 27 16 chr20 36461419 36461629 -35692253 - MIR SINE MIR -48 214 1 189 252 204 19 chr20 36462579 36462682 -35691200 + MIR SINE MIR 25 146 -62 332 296 93 81 chr20 36463369 36463852 -35690030 + L2 LINE L2 2423 2911 -403 813 251 195 42 chr20 36463924 36464330 -35689552 - L2 LINE L2 -10 3303 2836 481 226 7 90 chr20 36465166 36465212 -35688670 - MIR3 SINE MIR -11 197 149 420 281 118 11 chr20 36465212 36465390 -35688492 - MER117 DNA MER1_type 0 197 1 481 226 7 90 chr20 36465390 36465498 -35688384 - MIR3 SINE MIR -59 149 56 278 319 32 0 chr20 36465712 36465806 -35688076 + L2 LINE L2 3141 3237 -35 234 270 130 17 chr20 36466013 36466128 -35687754 - MIR3 SINE MIR -79 129 2 512 219 17 0 chr20 36466527 36466646 -35687236 + MIR SINE MIR 33 153 -55 477 264 82 6 chr20 36466708 36466867 -35687015 + MER5A DNA MER1_type 1 171 -18 508 210 23 10 chr20 36467531 36467662 -35686220 + MIR SINE MIR 37 163 -45 467 196 82 2 chr20 36468032 36468186 -35685696 + MIR SINE MIR 13 175 -68 221 295 0 33 chr20 36468302 36468363 -35685519 - MIR SINE MIR -60 148 90 240 269 13 67 chr20 36470292 36470441 -35683441 + CT-rich Low_complexity Low_complexity 1 141 0 226 343 52 22 chr20 36470967 36471101 -35682781 + MIR SINE MIR 100 237 -25 382 281 33 25 chr20 36471258 36471379 -35682503 + L2 LINE L2 3151 3272 0 405 238 69 3 chr20 36471489 36471667 -35682215 + MIR SINE MIR 22 255 -7 2289 90 3 3 chr20 36471724 36472035 -35681847 + AluY SINE Alu 1 311 0 294 250 38 0 chr20 36472594 36472674 -35681208 - MIR3 SINE MIR -32 176 94 476 357 39 0 chr20 36472763 36472945 -35680937 + MIR SINE MIR 5 193 -69 2363 112 0 0 chr20 36576294 36576607 -35577275 + AluSq SINE Alu 1 313 0 669 106 39 0 chr20 36576920 36577024 -35576858 + Tigger3(Golem) DNA MER2_type 1 108 -2921 * 860 139 110 25 chr20 36577015 36577260 -35576622 + Tigger3(Golem) DNA MER2_type 2277 2542 -487 271 233 14 14 chr20 36577233 36577306 -35576576 + AluSp SINE Alu 122 194 -109 * 2171 116 23 0 chr20 36577324 36577625 -35576257 + AluSx SINE Alu 1 308 -4 1408 167 41 0 chr20 36577677 36577898 -35575984 + AluJb SINE Alu 66 295 -17 1366 146 45 150 chr20 36577899 36578139 -35575743 + Tigger3(Golem) DNA MER2_type 2588 2751 -277 2001 149 0 0 chr20 36578139 36578434 -35575448 - AluSg SINE Alu -15 295 1 1366 146 45 150 chr20 36578434 36578686 -35575196 + Tigger3(Golem) DNA MER2_type 2751 3028 0 2239 106 3 0 chr20 36578703 36578996 -35574886 - AluSq SINE Alu -17 296 3 941 93 16 8 chr20 36578997 36579126 -35574756 - AluSq/x SINE Alu -176 136 7 995 163 93 73 chr20 36581661 36581974 -35571908 + MER33 DNA MER1_type 2 320 -4 199 179 51 0 chr20 36582026 36582065 -35571817 + MIR SINE MIR 156 196 -66 369 298 18 0 chr20 36582110 36582224 -35571658 + MIR SINE MIR 91 206 -56 243 0 0 0 chr20 36582287 36582314 -35571568 + (TTTTTG)n Simple_repeat Simple_repeat 3 29 0 1672 91 0 5 chr20 36582324 36582544 -35571338 - AluSq SINE Alu -94 219 1 245 208 75 0 chr20 36582546 36582599 -35571283 - MIR SINE MIR -98 164 108 771 237 36 10 chr20 36582813 36583007 -35570875 + Charlie8 DNA MER1_type 67 265 -2152 296 308 129 36 chr20 36583250 36583562 -35570320 - L2 LINE L2 -184 3088 2752 279 143 16 79 chr20 36583679 36583742 -35570140 - MIR3 SINE MIR -6 202 144 1328 120 0 5 chr20 36583828 36584012 -35569870 + AluSx SINE Alu 1 183 -129 198 288 48 110 chr20 36584160 36584306 -35569576 - MIR SINE MIR -56 206 70 202 358 92 8 chr20 36584362 36584482 -35569400 + L2 LINE L2 3141 3270 -2 2256 112 0 3 chr20 36584674 36584969 -35568913 + AluSg SINE Alu 1 294 -16 3206 187 56 0 chr20 36584971 36585164 -35568718 - L1MD2 LINE L1 -16 6343 6162 189 0 0 0 chr20 36585164 36585185 -35568697 + (TG)n Simple_repeat Simple_repeat 2 22 0 3206 187 56 0 chr20 36585185 36585602 -35568280 - L1MD2 LINE L1 -197 6162 5699 191 333 0 23 chr20 36585652 36585739 -35568143 + MIR SINE MIR 151 235 -27 2477 106 14 25 chr20 36585853 36586221 -35567661 - THE1B LTR MaLR 0 364 1 412 221 58 0 chr20 36586253 36586339 -35567543 - MIR SINE MIR -123 139 49 303 296 11 0 chr20 36586355 36586443 -35567439 - L2 LINE L2 -557 2757 2669 267 254 30 0 chr20 36586728 36586795 -35567087 - MIR3 SINE MIR -51 157 89 335 167 0 0 chr20 36586807 36586861 -35567021 - L1MD2 LINE L1 -2244 5541 5488 1383 166 64 0 chr20 36586916 36587030 -35566852 - AluJo SINE Alu -62 250 145 201 39 0 0 chr20 36587030 36587056 -35566826 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1383 166 64 0 chr20 36587056 36587176 -35566706 - AluJo SINE Alu -167 145 1 950 134 0 22 chr20 36587216 36587395 -35566487 + (TTCCC)n Simple_repeat Simple_repeat 2 176 0 272 194 42 14 chr20 36587395 36587467 -35566415 + CT-rich Low_complexity Low_complexity 2 75 0 2023 110 4 4 chr20 36587480 36587753 -35566129 - AluSx SINE Alu -39 273 1 2540 63 0 7 chr20 36588780 36589082 -35564800 - AluY SINE Alu -11 300 1 260 302 140 11 chr20 36589171 36589469 -35564413 - L1M4 LINE L1 -2237 3909 3573 1818 184 13 3 chr20 36589584 36589893 -35563989 + AluJb SINE Alu 1 312 0 1820 88 13 0 chr20 36589935 36590188 -35563694 + AluSq SINE Alu 55 310 0 1739 103 4 4 chr20 36590701 36590934 -35562948 - AluSg/x SINE Alu -11 299 67 2116 99 0 18 chr20 36590934 36591217 -35562665 - AluY SINE Alu -33 278 1 2238 117 0 0 chr20 36591232 36591523 -35562359 - AluSc SINE Alu -18 291 1 185 333 67 0 chr20 36591574 36591634 -35562248 + L2 LINE L2 3142 3205 -67 2076 133 17 0 chr20 36591706 36592000 -35561882 - AluSx SINE Alu -13 299 1 315 250 40 0 chr20 36592026 36592102 -35561780 - MIR3 SINE MIR -48 160 82 2035 156 43 54 chr20 36593315 36593757 -35560125 + LTR36 LTR ERV1 1 437 -174 1725 101 0 9 chr20 36593762 36593990 -35559892 - AluSg/x SINE Alu -2 308 83 287 224 15 15 chr20 36593990 36594057 -35559825 + LTR36 LTR ERV1 545 611 0 180 0 0 0 chr20 36594067 36594087 -35559795 + (A)n Simple_repeat Simple_repeat 1 20 0 2076 139 3 0 chr20 36594093 36594387 -35559495 + AluSx SINE Alu 1 295 -17 776 176 139 12 chr20 36594397 36594562 -35559320 - MER66B LTR ERV1 -3 483 298 291 77 0 0 chr20 36594611 36594650 -35559232 + U2 snRNA snRNA 1 39 -149 421 193 68 85 chr20 36594654 36594830 -35559052 - MER66B LTR ERV1 -217 269 97 235 284 167 0 chr20 36594910 36595012 -35558870 + MIR SINE MIR 87 205 -57 913 246 62 25 chr20 36595634 36595878 -35558004 + MIR SINE MIR 10 262 0 317 349 56 16 chr20 36596186 36596438 -35557444 - L1MC/D LINE L1 -2008 5800 5539 831 155 8 0 chr20 36596535 36596664 -35557218 + AluJb SINE Alu 5 134 -178 349 294 5 22 chr20 36596711 36596895 -35556987 - L1MC/D LINE L1 -797 5349 5169 2156 136 0 3 chr20 36596907 36597215 -35556667 - AluSx SINE Alu 0 312 6 189 0 0 0 chr20 36597220 36597241 -35556641 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 1147 142 0 0 chr20 36597243 36597405 -35556477 - FRAM SINE Alu -17 159 1 2816 23 0 0 chr20 36597459 36597769 -35556113 - AluYa5 SINE Alu -1 310 1 502 292 51 39 chr20 36597821 36597967 -35555915 - L1MC4 LINE L1 -198 7844 7701 2166 96 0 0 chr20 36597967 36598238 -35555644 - AluSx SINE Alu -41 271 1 502 292 51 39 chr20 36598238 36598423 -35555459 - L1MC4 LINE L1 -341 7701 7509 1025 190 112 14 chr20 36598505 36598776 -35555106 - MLT1D LTR MaLR 0 505 227 490 203 110 0 chr20 36598869 36598987 -35554895 + MER63 DNA MER1_type 4 760 -76 195 125 188 21 chr20 36599046 36599094 -35554788 - L3 LINE CR1 -755 822 767 188 333 32 32 chr20 36599596 36599689 -35554193 + L2 LINE L2 1162 1254 -2060 2513 61 3 0 chr20 36599935 36600231 -35553651 - AluY SINE Alu -14 297 1 423 264 97 28 chr20 36601284 36601487 -35552395 + MIR SINE MIR 27 256 -6 2885 13 0 0 chr20 36601490 36601823 -35552059 - AluY SINE Alu 0 333 1 2699 30 0 0 chr20 36601825 36602122 -35551760 - AluY SINE Alu -14 297 1 397 244 231 6 chr20 36602573 36602733 -35551149 + MIR3 SINE MIR 10 205 -3 846 144 0 0 chr20 36603001 36603119 -35550763 + FRAM SINE Alu 36 153 -23 21 57 0 0 chr20 36603242 36603277 -35550605 + AT_rich Low_complexity Low_complexity 1 35 0 336 200 0 0 chr20 36603821 36603881 -35550001 - FLAM_A SINE Alu -73 60 1 1617 184 3 31 chr20 36603910 36604198 -35549684 + AluJb SINE Alu 1 280 -32 864 129 32 0 chr20 36604241 36604396 -35549486 + L1MB8 LINE L1 6007 6166 -12 1826 160 0 57 chr20 36604697 36604867 -35549015 - AluJb SINE Alu -11 301 156 2416 80 0 0 chr20 36604867 36605166 -35548716 - AluY SINE Alu -12 299 1 1826 160 0 57 chr20 36605166 36605313 -35548569 - AluJb SINE Alu -156 156 2 195 250 62 12 chr20 36605608 36605688 -35548194 - L2 LINE L2 -410 2904 2821 510 188 16 62 chr20 36605860 36605954 -35547928 - MSTC LTR MaLR -238 158 78 910 144 0 0 chr20 36605954 36606079 -35547803 - FLAM_C SINE Alu -7 126 2 510 188 16 62 chr20 36606079 36606154 -35547728 - MSTC LTR MaLR -318 78 1 538 327 58 23 chr20 36606155 36606415 -35547467 - L2 LINE L2 -217 3096 2828 409 232 143 0 chr20 36606747 36606859 -35547023 + MIR SINE MIR 116 243 -19 515 292 0 26 chr20 36607339 36607493 -35546389 - MIR3 SINE MIR -1 207 58 261 336 70 7 chr20 36607688 36607831 -35546051 + MIR3 SINE MIR 43 194 -14 1699 195 3 13 chr20 36607949 36608262 -35545620 - AluJb SINE Alu -2 310 1 328 245 129 14 chr20 36608442 36608581 -35545301 - L2 LINE L2 -183 3089 2935 202 149 0 43 chr20 36608658 36608705 -35545177 + (GGA)n Simple_repeat Simple_repeat 1 45 0 335 290 130 30 chr20 36608969 36609169 -35544713 + L2 LINE L2 2893 3112 -160 1145 200 51 0 chr20 36609250 36609445 -35544437 - AluJb SINE Alu -17 295 91 503 154 0 0 chr20 36609445 36609523 -35544359 + AluJo SINE Alu 70 147 -165 193 161 0 0 chr20 36609527 36609558 -35544324 + L2 LINE L2 3008 3038 -275 847 128 8 0 chr20 36609589 36609706 -35544176 + AluJo/FLAM SINE Alu 1 118 -184 607 107 0 12 chr20 36609706 36609790 -35544092 - AluJb SINE Alu -228 84 2 426 298 53 8 chr20 36610032 36610163 -35543719 - MIR SINE MIR -113 149 13 272 293 172 9 chr20 36610205 36610321 -35543561 - L2 LINE L2 0 3313 3179 287 191 9 130 chr20 36611394 36611509 -35542373 + L2 LINE L2 2943 3043 -229 1707 152 3 25 chr20 36611533 36611816 -35542066 + AluJo SINE Alu 1 277 -35 972 192 12 0 chr20 36611816 36611988 -35541894 - AluJo SINE Alu -138 174 1 2035 127 0 7 chr20 36612010 36612310 -35541572 - AluSx SINE Alu -14 298 1 320 362 17 40 chr20 36612314 36612488 -35541394 + L2 LINE L2 3103 3272 0 597 333 27 0 chr20 36612886 36613072 -35540810 + MIR SINE MIR 51 241 -21 2002 105 0 7 chr20 36614378 36614692 -35539190 - AluSq SINE Alu 0 312 1 1847 144 0 27 chr20 36614694 36614993 -35538889 - AluSx SINE Alu -21 291 1 550 150 0 45 chr20 36615130 36615236 -35538646 - MER31A LTR ERV1 -37 444 340 364 371 77 15 chr20 36615236 36615508 -35538374 - L1MC/D LINE L1 -2213 5595 5307 865 223 57 14 chr20 36615529 36615740 -35538142 - MIR SINE MIR -12 250 31 256 340 42 91 chr20 36615809 36616074 -35537808 - L2 LINE L2 -13 3259 3008 642 185 85 0 chr20 36616112 36616242 -35537640 - MER63D DNA MER1_type -2 1060 920 690 234 0 0 chr20 36616248 36616376 -35537506 + FLAM_A SINE Alu 1 128 -5 267 31 0 0 chr20 36616381 36616413 -35537469 + (GA)n Simple_repeat Simple_repeat 1 32 0 259 133 17 17 chr20 36616434 36616494 -35537388 + GA-rich Low_complexity Low_complexity 1 60 0 2049 199 90 107 chr20 36616496 36616873 -35537009 - MER63D DNA MER1_type -139 922 540 2083 124 10 0 chr20 36616873 36617180 -35536702 + AluSx SINE Alu 3 312 0 2049 199 90 107 chr20 36617180 36617191 -35536691 - MER63D DNA MER1_type -521 540 530 2032 112 34 10 chr20 36617191 36617487 -35536395 + AluSx SINE Alu 1 303 -9 2049 199 90 107 chr20 36617487 36617899 -35535983 - MER63D DNA MER1_type -531 530 4 247 242 121 22 chr20 36618215 36618306 -35535576 + MIR SINE MIR 103 202 -60 909 179 5 65 chr20 36618335 36618393 -35535489 + MER5A DNA MER1_type 1 61 -128 2349 91 0 0 chr20 36618393 36618702 -35535180 - AluSq SINE Alu -3 310 2 909 179 5 65 chr20 36618702 36618844 -35535038 + MER5A DNA MER1_type 61 189 0 398 250 128 18 chr20 36618906 36619070 -35534812 - MER5A DNA MER1_type -1 188 7 385 238 127 16 chr20 36619115 36619241 -35534641 + Charlie8 DNA MER1_type 37 176 -2241 1244 237 4 0 chr20 36619690 36619968 -35533914 - L1ME3 LINE L1 -24 6138 5860 338 290 67 27 chr20 36619981 36620281 -35533601 + L1ME4a LINE L1 5771 6082 -39 272 213 0 0 chr20 36620277 36620338 -35533544 - L1MC4 LINE L1 0 8042 7982 * 320 119 0 0 chr20 36620339 36620381 -35533501 - AluSp SINE Alu -130 173 132 1908 104 0 84 chr20 36620390 36620569 -35533313 - AluSp SINE Alu -6 307 115 211 28 56 0 chr20 36620569 36620605 -35533277 + (TTTTG)n Simple_repeat Simple_repeat 3 40 0 2108 81 4 0 chr20 36620605 36620876 -35533006 - AluSp SINE Alu -30 283 12 1908 104 0 84 chr20 36620876 36621030 -35532852 - AluSp SINE Alu -196 117 1 204 40 0 0 chr20 36621097 36621122 -35532760 + (A)n Simple_repeat Simple_repeat 1 25 0 2274 100 0 0 chr20 36621128 36621428 -35532454 + AluSx SINE Alu 1 300 -12 24 0 0 0 chr20 36621957 36621981 -35531901 + AT_rich Low_complexity Low_complexity 1 24 0 2031 136 8 20 chr20 36621986 36622339 -35531543 - L1MB7 LINE L1 -222 5962 5614 1297 134 16 0 chr20 36622339 36622533 -35531349 - MSTC LTR MaLR 0 428 232 300 298 228 9 chr20 36622720 36622834 -35531048 + L2 LINE L2 3134 3272 0 390 317 96 43 chr20 36622931 36623024 -35530858 - MIR SINE MIR 0 262 175 2161 118 0 0 chr20 36623024 36623329 -35530553 - AluSx SINE Alu -7 305 1 390 317 96 43 chr20 36623329 36623465 -35530417 - MIR SINE MIR -87 175 21 265 266 123 8 chr20 36623872 36623996 -35529886 + MIR SINE MIR 2 138 -70 721 291 40 20 chr20 36624003 36624254 -35529628 + MIR SINE MIR 7 262 0 3184 217 59 39 chr20 36624383 36624551 -35529331 - L1MEc LINE L1 -838 1738 1575 2215 106 3 0 chr20 36624551 36624862 -35529020 - AluSx SINE Alu 0 312 1 3184 217 59 39 chr20 36624862 36625113 -35528769 - L1MEc LINE L1 -1001 1575 1330 2238 91 0 13 chr20 36625113 36625422 -35528460 + AluSx SINE Alu 6 310 -2 3184 217 59 39 chr20 36625422 36626198 -35527684 - L1MEc LINE L1 -1246 1330 1880 2259 96 0 3 chr20 36626198 36626500 -35527382 - AluSq SINE Alu -12 301 1 3184 217 59 39 chr20 36626500 36626859 -35527023 - L1MEc LINE L1 -695 1881 1531 1056 158 0 6 chr20 36626889 36627076 -35526806 - AluSc SINE Alu 0 306 121 1804 110 3 125 chr20 36627093 36627275 -35526607 - AluSq SINE Alu -15 288 161 7098 46 11 29 chr20 36627275 36628841 -35525041 - SVA Other Other -799 1383 1 1804 110 3 125 chr20 36628841 36628985 -35524897 - AluSq SINE Alu -142 161 1 2737 230 63 49 chr20 36629032 36630054 -35523828 - L1MEc LINE L1 -4906 1490 455 763 189 8 0 chr20 36630055 36630182 -35523700 - MLT1F LTR MaLR -16 551 424 643 158 0 0 chr20 36630183 36630284 -35523598 + FLAM_A SINE Alu 30 130 -12 951 247 169 31 chr20 36630284 36630640 -35523242 - MLT1F LTR MaLR -136 406 2 1697 225 25 55 chr20 36630641 36630966 -35522916 - L1MEc LINE L1 -5936 460 150 1833 127 18 3 chr20 36630966 36631249 -35522633 - AluJo SINE Alu -17 295 9 1697 225 25 55 chr20 36631249 36631359 -35522523 - L1MEc LINE L1 -6246 150 38 2178 142 24 6 chr20 36631566 36631897 -35521985 - MER1B DNA MER1_type 0 337 1 2233 89 0 19 chr20 36632063 36632378 -35521504 + AluY SINE Alu 1 309 -2 2229 96 0 3 chr20 36632502 36632804 -35521078 - AluSg SINE Alu -9 301 1 365 246 6 54 chr20 36632813 36632830 -35521052 - L1MA10 LINE L1 -1 6333 6317 999 197 101 82 chr20 36632830 36632903 -35520979 - L1ME2 LINE L1 -10 6154 6084 1826 151 3 7 chr20 36632903 36633194 -35520688 - AluJb SINE Alu -22 290 1 999 197 101 82 chr20 36633194 36633384 -35520498 - L1ME2 LINE L1 -80 6084 5879 2093 99 3 0 chr20 36633384 36633696 -35520186 + AluY SINE Alu 1 313 0 999 197 101 82 chr20 36633696 36633785 -35520097 - L1ME2 LINE L1 -285 5879 5793 732 185 7 22 chr20 36633789 36633924 -35519958 - FLAM_A SINE Alu 0 133 1 276 309 10 31 chr20 36633939 36634009 -35519873 - MIR SINE MIR -5 257 188 1371 228 14 0 chr20 36634009 36634298 -35519584 - AluJb SINE Alu -19 293 1 276 309 10 31 chr20 36634298 36634324 -35519558 - MIR SINE MIR -74 188 163 187 264 75 0 chr20 36634459 36634512 -35519370 + MIR SINE MIR 41 97 -111 326 242 195 20 chr20 36635109 36635258 -35518624 + MIR3 SINE MIR 30 204 -4 353 220 202 69 chr20 36635317 36635490 -35518392 + MIR SINE MIR 2 197 -65 886 178 0 26 chr20 36635525 36635677 -35518205 + AluJb SINE Alu 135 282 -30 2337 70 0 7 chr20 36635681 36635979 -35517903 - AluY SINE Alu -15 296 1 3429 169 24 40 chr20 36635979 36636439 -35517443 - L1MC3 LINE L1 -1174 6611 6166 2236 99 0 0 chr20 36636439 36636742 -35517140 - AluY SINE Alu -8 303 1 3429 169 24 40 chr20 36636742 36637025 -35516857 - L1MC3 LINE L1 -1619 6166 5880 2080 77 63 0 chr20 36637035 36637321 -35516561 - AluSp SINE Alu -9 304 1 1767 114 3 65 chr20 36637388 36637560 -35516322 - AluSq SINE Alu -17 296 148 2063 116 0 3 chr20 36637560 36637862 -35516020 - AluSq SINE Alu -12 301 1 1767 114 3 65 chr20 36637862 36637979 -35515903 - AluSq SINE Alu -165 148 25 1256 203 32 32 chr20 36637989 36638300 -35515582 - L1M4 LINE L1 -1763 4383 4073 1347 83 0 0 chr20 36638305 36638474 -35515408 - AluSg SINE Alu -141 169 1 205 278 86 62 chr20 36638927 36639089 -35514793 + L3 LINE CR1 1218 1383 -194 1890 136 30 0 chr20 36639089 36639390 -35514492 - AluSx SINE Alu -2 310 1 698 93 0 0 chr20 36639404 36639501 -35514381 - AluSp/q SINE Alu 0 313 217 702 240 34 29 chr20 36639854 36640029 -35513853 + MIR SINE MIR 44 219 -43 1379 104 0 5 chr20 36640032 36640225 -35513657 - AluSc SINE Alu -15 294 103 2083 117 7 3 chr20 36640339 36640648 -35513234 - AluSg SINE Alu 0 310 1 1825 148 0 13 chr20 36640650 36640953 -35512929 - AluJo SINE Alu -13 299 1 1989 158 0 9 chr20 36640953 36641481 -35512401 - L1M2 LINE L1 -707 5584 5061 * 2854 174 103 90 chr20 36641480 36641870 -35512012 + L1MC3 LINE L1 6716 7100 -685 249 307 45 0 chr20 36641870 36641958 -35511924 + MLT1F1 LTR MaLR 35 126 -441 2854 174 103 90 chr20 36641958 36642521 -35511361 + L1MC3 LINE L1 7100 7769 -16 2215 104 3 0 chr20 36642527 36642825 -35511057 + AluSx SINE Alu 1 299 -13 1329 197 0 0 chr20 36642863 36643097 -35510785 + AluJb SINE Alu 68 301 -11 272 290 100 46 chr20 36643534 36643793 -35510089 - L3 LINE CR1 -170 1407 1135 808 118 24 8 chr20 36644001 36644128 -35509754 - L1MC3 LINE L1 -21 7764 7636 189 306 82 0 chr20 36644142 36644191 -35509691 - L3 LINE CR1 -451 1126 1074 216 197 164 16 chr20 36644410 36644471 -35509411 + L2 LINE L2 3238 3307 -6 294 312 55 28 chr20 36644829 36644938 -35508944 + MIR3 SINE MIR 54 165 -43 969 280 94 45 chr20 36644970 36645263 -35508619 - L2 LINE L2 -2 3311 3034 2055 117 13 0 chr20 36645263 36645571 -35508311 + AluJb SINE Alu 1 312 0 969 280 94 45 chr20 36645571 36645837 -35508045 - L2 LINE L2 -279 3034 2721 405 159 76 91 chr20 36645874 36646006 -35507876 + MIR SINE MIR 9 138 -70 * 857 283 16 12 chr20 36646004 36646090 -35507792 + MIR SINE MIR 12 96 -166 2392 77 3 0 chr20 36646090 36646400 -35507482 - AluY SINE Alu 0 311 1 857 283 16 12 chr20 36646400 36646557 -35507325 + MIR SINE MIR 96 256 -6 234 307 149 0 chr20 36646596 36646710 -35507172 + MIR SINE MIR 74 204 -58 1995 119 10 0 chr20 36647157 36647450 -35506432 + L1MA4 LINE L1 5725 6020 -280 336 188 35 0 chr20 36647450 36647535 -35506347 + L1MB3 LINE L1 6087 6174 -9 264 221 29 15 chr20 36647705 36647773 -35506109 + MIR3 SINE MIR 4 72 -136 1934 123 0 52 chr20 36648021 36648207 -35505675 - AluSx SINE Alu -5 307 144 2258 103 0 3 chr20 36648207 36648517 -35505365 - AluSc SINE Alu 0 309 1 1934 123 0 52 chr20 36648517 36648654 -35505228 - AluSx SINE Alu -168 144 1 1776 135 39 0 chr20 36648656 36648937 -35504945 - AluJb SINE Alu -18 294 3 235 0 57 0 chr20 36648994 36649029 -35504853 + (CAAAAA)n Simple_repeat Simple_repeat 6 42 0 2163 81 44 3 chr20 36649262 36649559 -35504323 + AluSp SINE Alu 1 309 -4 228 340 121 0 chr20 36649867 36650073 -35503809 + L1ME4a LINE L1 5477 5707 -414 1997 132 3 0 chr20 36650073 36650360 -35503522 + AluSx SINE Alu 1 288 -24 2007 129 0 0 chr20 36650366 36650652 -35503230 + AluSx SINE Alu 1 286 -26 1879 126 9 25 chr20 36650666 36650983 -35502899 + AluSq SINE Alu 1 312 -1 341 304 90 51 chr20 36650984 36651319 -35502563 + L1ME4a LINE L1 5692 6039 -82 1318 186 58 15 chr20 36651342 36651616 -35502266 - AluJo SINE Alu 0 312 27 25 0 0 0 chr20 36651619 36651644 -35502238 + AT_rich Low_complexity Low_complexity 1 25 0 311 225 28 0 chr20 36651665 36651736 -35502146 + L1ME4a LINE L1 6047 6119 -2 276 153 64 153 chr20 36651775 36651977 -35501905 - Charlie7 DNA MER1_type 0 2612 2429 1714 132 14 11 chr20 36652071 36652352 -35501530 - AluJb SINE Alu -30 282 1 600 309 97 64 chr20 36652378 36653014 -35500868 + L2 LINE L2 2607 3265 -7 255 276 103 0 chr20 36653022 36653138 -35500744 - L1ME4a LINE L1 -26 6095 5968 197 258 10 124 chr20 36653382 36653479 -35500403 + MIR3 SINE MIR 87 172 -36 2063 97 35 0 chr20 36653697 36653985 -35499897 - AluSx SINE Alu -14 298 1 277 246 16 0 chr20 36654182 36654243 -35499639 + L2 LINE L2 3206 3267 -5 181 390 0 0 chr20 36654389 36654471 -35499411 - MIR3 SINE MIR -14 194 113 779 263 96 47 chr20 36654573 36654705 -35499177 + L1MEd LINE L1 103 227 -5892 1943 128 3 0 chr20 36654705 36654994 -35498888 - AluSx SINE Alu -22 290 1 779 263 96 47 chr20 36654994 36655245 -35498637 + L1MEd LINE L1 227 505 -5614 265 242 77 11 chr20 36655284 36655375 -35498507 + MIR SINE MIR 166 262 0 883 267 24 24 chr20 36655425 36655635 -35498247 + MER63A DNA MER1_type 1 210 0 452 227 0 0 chr20 36655929 36656017 -35497865 - L1MB8 LINE L1 -189 5989 5902 817 201 6 18 chr20 36656039 36656208 -35497674 - MER33 DNA MER1_type -157 167 1 701 255 32 81 chr20 36656989 36657299 -35496583 - MER102a DNA MER1_type -15 315 21 360 339 31 0 chr20 36657744 36657871 -35496011 + MIR3 SINE MIR 30 160 -48 1771 136 11 18 chr20 36657941 36658227 -35495655 - AluJo SINE Alu -15 297 14 2500 108 27 11 chr20 36658227 36658596 -35495286 + THE1C LTR MaLR 1 375 0 216 0 0 0 chr20 36658933 36658957 -35494925 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 1504 158 21 49 chr20 36658964 36659248 -35494634 - AluSx SINE Alu -36 276 1 1677 170 0 47 chr20 36659354 36659672 -35494210 - AluJo SINE Alu -9 303 1 2451 62 3 0 chr20 36659878 36660183 -35493699 + AluY SINE Alu 1 306 -5 312 172 0 0 chr20 36661027 36661085 -35492797 + (CA)n Simple_repeat Simple_repeat 1 58 0 324 229 43 0 chr20 36661085 36661155 -35492727 - L1MCa LINE L1 -4358 2068 1996 * 356 136 0 15 chr20 36661140 36661206 -35492676 + (CA)n Simple_repeat Simple_repeat 2 66 0 1817 148 69 7 chr20 36661239 36661530 -35492352 + AluJo SINE Alu 3 311 -1 255 302 145 28 chr20 36661752 36661931 -35491951 - MIR SINE MIR -16 246 47 2312 87 3 13 chr20 36662325 36662634 -35491248 + AluSg SINE Alu 5 310 0 2556 78 3 0 chr20 36663244 36663552 -35490330 + AluSp SINE Alu 1 309 -4 685 270 39 7 chr20 36663555 36663609 -35490273 + L1MC4 LINE L1 7701 7752 -290 1847 166 16 13 chr20 36663609 36663917 -35489965 - AluJb SINE Alu -3 309 1 685 270 39 7 chr20 36663917 36664147 -35489735 + L1MC4 LINE L1 7752 7994 -48 534 126 0 35 chr20 36664154 36664241 -35489641 - FLAM_A SINE Alu -17 125 42 2323 107 7 0 chr20 36664241 36664549 -35489333 - AluSq SINE Alu -3 310 1 3726 136 14 8 chr20 36664632 36665257 -35488625 - L1MB3 LINE L1 -4 6179 5551 1887 139 35 3 chr20 36665401 36665688 -35488194 + AluJb SINE Alu 1 296 -16 2522 74 0 0 chr20 36665757 36666066 -35487816 + AluY SINE Alu 1 309 -2 4850 153 49 9 chr20 36666151 36667001 -35486881 + L1MC1 LINE L1 5450 6333 0 1568 101 5 18 chr20 36667034 36667251 -35486631 + AluSq SINE Alu 91 304 -9 925 271 281 14 chr20 36667535 36668253 -35485629 - L2 LINE L2 -50 3263 2339 2143 95 7 21 chr20 36668307 36668592 -35485290 + AluSq SINE Alu 1 281 -32 243 0 0 0 chr20 36668593 36668620 -35485262 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1132 141 40 5 chr20 36668731 36668770 -35485112 - L1M3 LINE L1 -488 5683 5647 1005 208 127 5 chr20 36668770 36668982 -35484900 - MER8 DNA MER2_type 0 239 2 1132 141 40 5 chr20 36668982 36669141 -35484741 - L1M3 LINE L1 -524 5647 5478 528 155 31 93 chr20 36669142 36669155 -35484727 - FLAM_A SINE Alu -171 140 128 2394 113 0 0 chr20 36669155 36669466 -35484416 - AluSx SINE Alu -1 311 1 528 155 31 93 chr20 36669466 36669581 -35484301 - FLAM_A SINE Alu -183 128 20 1504 161 10 26 chr20 36669582 36669886 -35483996 - L1MC4 LINE L1 -961 7081 6783 375 219 118 8 chr20 36669959 36670078 -35483804 - MIR SINE MIR -56 152 21 268 213 21 0 chr20 36670855 36670902 -35482980 - L2 LINE L2 -8 3264 3217 1711 94 133 12 chr20 36671033 36671289 -35482593 + AluSg1 SINE Alu 1 287 -22 355 257 92 44 chr20 36671340 36671546 -35482336 - L2 LINE L2 -220 3052 2837 15022 156 66 44 chr20 36672264 36673030 -35480852 + MER109 Unknown Unknown 1 749 -1683 2353 90 0 0 chr20 36673030 36673319 -35480563 - AluSc SINE Alu -20 289 1 15022 156 66 44 chr20 36673319 36676977 -35476905 + MER109 Unknown Unknown 749 2432 0 858 269 151 38 chr20 36677253 36677670 -35476212 - L2 LINE L2 0 3313 2850 2998 214 69 6 chr20 36677690 36678386 -35475496 - L2 LINE L2 -648 2666 1927 2292 93 0 7 chr20 36678468 36678768 -35475114 - AluSg SINE Alu -12 298 1 2309 112 0 3 chr20 36678782 36679095 -35474787 - AluSx SINE Alu 0 312 1 2095 141 0 20 chr20 36679099 36679423 -35474459 - AluSx SINE Alu 0 312 1 2128 137 10 0 chr20 36679918 36680224 -35473658 - AluSg SINE Alu 0 310 2 1426 279 58 44 chr20 36680225 36680371 -35473511 + L2 LINE L2 2282 2424 -848 2512 103 14 3 chr20 36680371 36680722 -35473160 + THE1A LTR MaLR 1 355 0 1426 279 58 44 chr20 36680722 36680829 -35473053 + L2 LINE L2 2424 2528 -744 963 204 24 33 chr20 36680829 36681040 -35472842 - MER3 DNA MER1_type 0 209 1 1426 279 58 44 chr20 36681040 36681318 -35472564 + L2 LINE L2 2528 2833 -439 1650 152 50 36 chr20 36681318 36681371 -35472511 - AluJb SINE Alu -5 307 256 198 0 0 0 chr20 36681371 36681393 -35472489 + (CAGTG)n Simple_repeat Simple_repeat 1 22 0 1650 152 50 36 chr20 36681393 36681642 -35472240 - AluJb SINE Alu -56 256 1 1426 279 58 44 chr20 36681642 36681873 -35472009 + L2 LINE L2 2833 3059 -213 221 221 15 73 chr20 36681958 36682026 -35471856 - MIR SINE MIR 0 262 199 2179 131 0 0 chr20 36682036 36682334 -35471548 - AluSx SINE Alu -14 298 1 23 0 0 0 chr20 36682343 36682366 -35471516 + AT_rich Low_complexity Low_complexity 1 23 0 1626 155 3 59 chr20 36682366 36682669 -35471213 - AluJo SINE Alu -26 286 1 302 230 92 35 chr20 36682691 36682778 -35471104 + L2 LINE L2 3222 3313 0 * 645 239 8 0 chr20 36682776 36682910 -35470972 - MIR SINE MIR -13 249 115 1896 138 3 34 chr20 36683186 36683322 -35470560 + AluSx SINE Alu 1 140 -163 2217 113 10 10 chr20 36683322 36683633 -35470249 + AluSx SINE Alu 1 311 -1 1896 138 3 34 chr20 36683633 36683808 -35470074 + AluSx SINE Alu 140 303 0 662 95 0 0 chr20 36683809 36683893 -35469989 + AluS SINE Alu 2 85 -228 2593 65 0 0 chr20 36684063 36684370 -35469512 - AluY SINE Alu -4 307 1 870 176 0 0 chr20 36684489 36684637 -35469245 - MLT1A1 LTR MaLR 0 365 218 1673 91 0 0 chr20 36684643 36684851 -35469031 - AluSg/x SINE Alu 0 312 105 2433 96 3 0 chr20 36684861 36685173 -35468709 - AluSq SINE Alu 0 313 1 882 128 19 39 chr20 36685174 36685330 -35468552 - MLT1A1 LTR MaLR -212 153 1 2103 161 180 127 chr20 36685572 36685611 -35468271 + L1MC3 LINE L1 6881 6917 -868 2358 94 3 0 chr20 36685611 36685908 -35467974 + AluSx SINE Alu 3 300 -12 2103 161 180 127 chr20 36685908 36686037 -35467845 + L1MC3 LINE L1 6917 7038 -747 2226 85 7 3 chr20 36686037 36686360 -35467522 + AluSp SINE Alu 1 324 0 2103 161 180 127 chr20 36686360 36686419 -35467463 + L1MC3 LINE L1 7038 7092 -693 388 171 49 0 chr20 36686419 36686501 -35467381 + MLT1F1 LTR MaLR 45 130 -437 2103 161 180 127 chr20 36686501 36686991 -35466891 + L1MC3 LINE L1 7092 7724 -61 1079 206 113 28 chr20 36687034 36687325 -35466557 + MLT2D LTR ERVL 92 407 -7 248 124 0 124 chr20 36687328 36687417 -35466465 + L1MC3 LINE L1 7707 7784 -1 2387 108 0 13 chr20 36687424 36687740 -35466142 + AluSx SINE Alu 1 312 0 1764 230 71 21 chr20 36687774 36688253 -35465629 - MLT1D LTR MaLR -2 503 1 3021 150 25 4 chr20 36688391 36688863 -35465019 + MER66B LTR ERV1 1 482 -4 245 312 149 13 chr20 36688893 36689047 -35464835 + MIR SINE MIR 11 185 -77 196 339 74 0 chr20 36689138 36689256 -35464626 - MIR SINE MIR -55 153 77 2262 116 3 3 chr20 36689353 36689655 -35464227 - AluSq SINE Alu -11 302 1 226 220 0 0 chr20 36689672 36689722 -35464160 + Charlie8 DNA MER1_type 1368 1417 -1000 617 291 44 5 chr20 36690108 36690311 -35463571 + MIR SINE MIR 32 242 -20 546 79 0 0 chr20 36691071 36691147 -35462735 + (GCTG)n Simple_repeat Simple_repeat 1 76 0 2150 131 0 31 chr20 36692115 36692436 -35461446 - AluSx SINE Alu -1 311 1 324 0 0 0 chr20 36692464 36692500 -35461382 + (TG)n Simple_repeat Simple_repeat 1 36 0 392 102 68 0 chr20 36692925 36692984 -35460898 - L2 LINE L2 0 3313 3251 820 162 9 134 chr20 36693133 36693208 -35460674 + MER5A DNA MER1_type 1 84 -105 1927 73 0 4 chr20 36693208 36693442 -35460440 + AluY SINE Alu 66 298 -13 820 162 9 134 chr20 36693442 36693582 -35460300 + MER5A DNA MER1_type 84 189 0 491 351 17 0 chr20 36693586 36693760 -35460122 + MIR SINE MIR 13 189 -73 2386 93 10 3 chr20 36693825 36694136 -35459746 - AluSq SINE Alu 0 313 1 2106 125 11 0 chr20 36694210 36694512 -35459370 - AluSx SINE Alu 0 305 1 261 0 0 0 chr20 36694529 36694558 -35459324 + (A)n Simple_repeat Simple_repeat 1 29 0 2263 108 0 3 chr20 36694571 36694868 -35459014 - AluSp SINE Alu -17 296 1 329 306 50 16 chr20 36695252 36695373 -35458509 - MIR3 SINE MIR -2 206 82 1622 159 9 0 chr20 36695488 36695721 -35458161 + AluSx SINE Alu 1 235 -77 330 361 98 37 chr20 36695784 36696028 -35457854 + L2 LINE L2 2829 3087 -185 2223 113 0 20 chr20 36696047 36696349 -35457533 + AluSx SINE Alu 1 296 -16 2412 83 0 0 chr20 36697199 36697489 -35456393 + AluSq SINE Alu 1 290 -23 487 309 23 11 chr20 36697518 36697693 -35456189 + MIR3 SINE MIR 30 206 -2 231 323 18 29 chr20 36697964 36698103 -35455779 + GA-rich Low_complexity Low_complexity 1 140 -360 2139 140 7 0 chr20 36698103 36698410 -35455472 + AluJb SINE Alu 1 309 -3 231 323 18 29 chr20 36698410 36698470 -35455412 + GA-rich Low_complexity Low_complexity 140 500 0 251 281 98 0 chr20 36698764 36698846 -35455036 + L2 LINE L2 3174 3263 -9 2062 138 3 0 chr20 36698858 36699155 -35454727 + AluSx SINE Alu 1 298 -14 1086 118 7 0 chr20 36699592 36699736 -35454146 + AluJo SINE Alu 1 145 -167 2260 123 7 0 chr20 36699736 36700044 -35453838 + AluSp SINE Alu 1 310 -3 185 300 0 33 chr20 36700387 36700447 -35453435 + MIR SINE MIR 91 148 -60 2409 88 0 0 chr20 36700602 36700897 -35452985 - AluSg SINE Alu -15 295 1 531 354 39 24 chr20 36700986 36701240 -35452642 + MIR SINE MIR 5 262 0 288 283 43 0 chr20 36701253 36701345 -35452537 - MIR3 SINE MIR -5 203 108 237 298 135 10 chr20 36701331 36701435 -35452447 - L3b LINE CR1 -193 1390 1274 * 24 53 0 0 chr20 36701748 36701786 -35452096 + AT_rich Low_complexity Low_complexity 1 38 0 803 135 0 0 chr20 36701799 36701910 -35451972 - FLAM_C SINE Alu -32 111 1 254 94 38 0 chr20 36701965 36702018 -35451864 - L1MB4 LINE L1 0 6180 6126 216 184 0 0 chr20 36702041 36702090 -35451792 + CT-rich Low_complexity Low_complexity 3 51 0 213 149 0 43 chr20 36702659 36702706 -35451176 + (GGGGA)n Simple_repeat Simple_repeat 3 47 0 2580 66 0 0 chr20 36702785 36703088 -35450794 - AluY SINE Alu -7 304 2 2311 80 3 0 chr20 36703102 36703388 -35450494 - AluSx SINE Alu -20 292 6 1450 117 4 17 chr20 36703392 36703632 -35450250 - L1MB4 LINE L1 -38 6142 5906 940 164 141 11 chr20 36703634 36703811 -35450071 - AluJb SINE Alu -3 309 110 2805 88 20 2 chr20 36703822 36704220 -35449662 - LTR1 LTR ERV1 -25 760 356 1551 94 0 15 chr20 36704239 36704440 -35449442 + AluSg/x SINE Alu 94 291 -21 2931 143 63 74 chr20 36704440 36704604 -35449278 + L1MB7 LINE L1 5497 5661 -523 2145 107 0 0 chr20 36704604 36704928 -35448954 + AluSx SINE Alu 1 324 0 2536 87 3 0 chr20 36704933 36705243 -35448639 + AluSp SINE Alu 1 311 -2 2931 143 63 74 chr20 36705243 36705264 -35448618 + L1MB7 LINE L1 5665 5685 -499 2116 96 17 46 chr20 36705264 36705566 -35448316 + AluSx SINE Alu 9 301 -11 2931 143 63 74 chr20 36705566 36705902 -35447980 + L1MB7 LINE L1 5685 6020 -164 5336 81 3 25 chr20 36705902 36706457 -35447425 - LTR8 LTR ERV1 0 691 154 2309 114 0 0 chr20 36706457 36706756 -35447126 + AluSx SINE Alu 3 301 -11 5336 81 3 25 chr20 36706756 36706907 -35446975 - LTR8 LTR ERV1 -537 154 1 2931 143 63 74 chr20 36706907 36707055 -35446827 + L1MB7 LINE L1 6020 6168 -16 1782 170 106 0 chr20 36707221 36707551 -35446331 - MLT1A1 LTR MaLR 0 365 1 592 270 77 28 chr20 36707605 36707711 -35446171 - L1ME3A LINE L1 -214 5956 5857 2217 107 3 3 chr20 36707711 36708010 -35445872 - AluSx SINE Alu -11 301 3 592 270 77 28 chr20 36708010 36708266 -35445616 - L1ME3A LINE L1 -313 5857 5576 400 211 119 28 chr20 36708270 36708534 -35445348 - L1ME3A LINE L1 -757 5389 5121 2008 175 105 24 chr20 36708541 36708814 -35445068 + MLT2B1 LTR ERVL 1 327 -193 2057 128 7 7 chr20 36708814 36709104 -35444778 - AluSx SINE Alu -22 290 1 2008 175 105 24 chr20 36709104 36709284 -35444598 + MLT2B1 LTR ERVL 327 491 -29 3427 83 38 21 chr20 36709284 36709742 -35444140 + MER41A LTR ERV1 1 486 -149 2148 80 15 0 chr20 36709742 36710004 -35443878 + AluSx SINE Alu 3 268 -44 3427 83 38 21 chr20 36710004 36710157 -35443725 + MER41A LTR ERV1 486 635 0 284 349 21 0 chr20 36710200 36710392 -35443490 - L1ME3A LINE L1 -1042 5104 4909 1958 159 82 34 chr20 36710406 36710847 -35443035 - MLT1C LTR MaLR 0 467 6 266 277 48 12 chr20 36710964 36711047 -35442835 - MIR SINE MIR -49 213 128 847 278 44 50 chr20 36711050 36711446 -35442436 - MLT1I LTR MaLR 0 409 44 346 232 61 0 chr20 36711500 36711582 -35442300 - MIR SINE MIR -147 115 29 236 260 0 0 chr20 36712236 36712286 -35441596 + MIR SINE MIR 102 151 -111 2341 109 0 0 chr20 36712344 36712646 -35441236 + AluSx SINE Alu 2 303 -9 181 189 27 0 chr20 36712783 36712820 -35441062 + MIR SINE MIR 222 259 -3 368 285 67 106 chr20 36713274 36713453 -35440429 - MIR3 SINE MIR -11 197 26 2222 79 7 7 chr20 36713515 36713831 -35440051 - AluSg SINE Alu 0 316 1 200 326 44 15 chr20 36713840 36713975 -35439907 + L2 LINE L2 2596 2734 -580 603 222 44 0 chr20 36714045 36714180 -35439702 - L3 LINE CR1 -109 1468 1328 2256 113 3 10 chr20 36714197 36714506 -35439376 - AluSx SINE Alu -5 307 1 2102 110 41 0 chr20 36714508 36714799 -35439083 - AluSq SINE Alu -10 303 1 827 272 55 149 chr20 36714991 36715227 -35438655 - L3 LINE CR1 -280 1297 1040 2272 94 0 19 chr20 36715227 36715395 -35438487 - AluSq SINE Alu -12 301 140 2190 109 0 45 chr20 36715395 36715708 -35438174 - AluSg SINE Alu -11 299 1 2272 94 0 19 chr20 36715708 36715846 -35438036 - AluSq SINE Alu -173 140 1 827 272 55 149 chr20 36715846 36716119 -35437763 - L3 LINE CR1 -537 1040 883 968 189 40 10 chr20 36716119 36716320 -35437562 - MER3 DNA MER1_type -2 207 1 827 272 55 149 chr20 36716320 36716580 -35437302 - L3 LINE CR1 -694 883 600 2312 119 0 0 chr20 36716800 36717102 -35436780 + AluSx SINE Alu 1 302 -10 557 255 160 5 chr20 36717108 36717308 -35436574 + MIR SINE MIR 31 261 -1 233 281 44 9 chr20 36718617 36718731 -35435151 + (CGGGG)n Simple_repeat Simple_repeat 5 122 0 189 252 15 8 chr20 36719099 36719230 -35434652 + (TG)n Simple_repeat Simple_repeat 2 133 0 231 296 0 35 chr20 36719332 36719447 -35434435 + (CGTG)n Simple_repeat Simple_repeat 3 113 0 342 195 0 0 chr20 36719690 36719767 -35434115 + (TG)n Simple_repeat Simple_repeat 1 77 0 1936 121 0 29 chr20 36720845 36720988 -35432894 - AluSx SINE Alu -40 272 139 2445 99 0 0 chr20 36720988 36721291 -35432591 - AluSq SINE Alu -10 303 1 1936 121 0 29 chr20 36721291 36721427 -35432455 - AluSx SINE Alu -173 139 1 625 203 25 74 chr20 36721732 36721781 -35432101 + MER5A DNA MER1_type 28 78 -111 2152 87 63 0 chr20 36721781 36722067 -35431815 + AluSx SINE Alu 1 304 -8 625 203 25 74 chr20 36722067 36722180 -35431702 + MER5A DNA MER1_type 78 182 -7 745 311 95 42 chr20 36722487 36722866 -35431016 + L2 LINE L2 2874 3272 0 196 300 14 29 chr20 36722864 36722934 -35430948 + MIR3 SINE MIR 132 200 -8 * 233 296 49 12 chr20 36723185 36723266 -35430616 + MIR3 SINE MIR 78 161 -47 631 295 121 5 chr20 36723276 36723500 -35430382 + MIR SINE MIR 12 261 -1 1851 185 96 14 chr20 36724330 36724757 -35429125 - MLT1C LTR MaLR 0 467 6 490 99 28 0 chr20 36724859 36724930 -35428952 + AluSx SINE Alu 2 74 -239 1899 82 0 9 chr20 36724958 36725214 -35428668 + AluSx SINE Alu 55 308 0 267 250 59 83 chr20 36725328 36725488 -35428394 + MIR SINE MIR 60 213 -49 21 0 0 0 chr20 36725504 36725525 -35428357 + AT_rich Low_complexity Low_complexity 1 21 0 180 0 0 0 chr20 36725573 36725593 -35428289 + (CAGCC)n Simple_repeat Simple_repeat 2 21 0 350 298 35 41 chr20 36725660 36725831 -35428051 - MIR3 SINE MIR -19 189 20 218 266 0 38 chr20 36726282 36726361 -35427521 + CT-rich Low_complexity Low_complexity 5 80 0 680 205 131 52 chr20 36726506 36726735 -35427147 - MIR SINE MIR -11 251 5 183 80 0 0 chr20 36727723 36727748 -35426134 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 2156 93 15 0 chr20 36727758 36728069 -35425813 + AluSx SINE Alu 13 327 0 189 275 12 38 chr20 36728418 36728498 -35425384 - MIR SINE MIR -115 93 16 373 186 70 0 chr20 36728531 36728617 -35425265 + MIR3 SINE MIR 110 201 -7 316 324 40 91 chr20 36728924 36729329 -35424553 + L2 LINE L2 2881 3264 -8 428 301 56 56 chr20 36729469 36729685 -35424197 + MIR SINE MIR 47 262 0 2580 58 7 7 chr20 36729711 36730021 -35423861 - AluY SINE Alu 0 311 2 284 158 0 35 chr20 36731527 36731584 -35422298 - L2 LINE L2 -1 3312 3258 238 272 44 0 chr20 36732452 36732554 -35421328 + MIR SINE MIR 79 151 -57 477 200 0 11 chr20 36732770 36732860 -35421022 + Charlie5 DNA MER1_type 1 89 -2523 1447 143 102 8 chr20 36732861 36733106 -35420776 - AluSx SINE Alu -44 268 1 211 149 64 0 chr20 36733111 36733158 -35420724 + (TTTAA)n Simple_repeat Simple_repeat 1 50 0 1049 180 60 90 chr20 36733170 36733231 -35420651 + Charlie5 DNA MER1_type 2236 2297 -327 2366 98 0 19 chr20 36733231 36733538 -35420344 - AluSg SINE Alu -9 301 1 1049 180 60 90 chr20 36733538 36733567 -35420315 + Charlie5 DNA MER1_type 2297 2325 -299 2300 95 7 3 chr20 36733567 36733861 -35420021 + AluSx SINE Alu 1 295 -17 1049 180 60 90 chr20 36733861 36733990 -35419892 + Charlie5 DNA MER1_type 2325 2456 -168 1791 162 19 13 chr20 36733990 36734299 -35419583 - AluJo SINE Alu -1 311 1 1049 180 60 90 chr20 36734299 36734412 -35419470 + Charlie5 DNA MER1_type 2456 2560 -64 2059 131 3 0 chr20 36734412 36734715 -35419167 + AluSx SINE Alu 1 304 0 1049 180 60 90 chr20 36734715 36734778 -35419104 + Charlie5 DNA MER1_type 2560 2623 -1 2491 73 0 13 chr20 36734964 36735266 -35418616 - AluY SINE Alu -13 298 1 332 281 152 34 chr20 36735302 36735480 -35418402 + MIR SINE MIR 46 244 -18 270 193 105 0 chr20 36735742 36735799 -35418083 - MIR SINE MIR -65 143 81 206 243 20 169 chr20 36735935 36735955 -35417927 - MIR3 SINE MIR -25 183 162 2544 72 3 0 chr20 36735955 36736260 -35417622 - AluSp SINE Alu -7 306 1 206 243 20 169 chr20 36736260 36736387 -35417495 - MIR3 SINE MIR -46 162 58 205 171 0 0 chr20 36736543 36736578 -35417304 + (CA)n Simple_repeat Simple_repeat 2 36 0 360 0 0 0 chr20 36736642 36736682 -35417200 + (CA)n Simple_repeat Simple_repeat 2 41 0 387 290 0 0 chr20 36736800 36736917 -35416965 + MIR SINE MIR 42 157 -68 361 296 11 0 chr20 36736920 36737052 -35416830 + MIR SINE MIR 4 140 -68 573 246 128 26 chr20 36737083 36737278 -35416604 - MIR SINE MIR -38 224 10 2543 89 0 3 chr20 36737523 36737836 -35416046 + AluSx SINE Alu 1 312 0 238 284 0 15 chr20 36737843 36737910 -35415972 - MIR3 SINE MIR -41 167 102 547 308 23 9 chr20 36737959 36738180 -35415702 + L2 LINE L2 2466 2689 -625 435 83 0 0 chr20 36739428 36739488 -35414394 + (TG)n Simple_repeat Simple_repeat 1 60 0 244 253 0 36 chr20 36740561 36740644 -35413238 - MLT1K LTR MaLR -3 585 506 384 208 0 62 chr20 36740822 36740918 -35412964 - MLT1K LTR MaLR -382 206 117 735 244 73 39 chr20 36741061 36741295 -35412587 - MIR SINE MIR 0 262 21 394 257 86 7 chr20 36741328 36741468 -35412414 - L3 LINE CR1 -96 1481 1331 473 220 124 133 chr20 36741548 36741631 -35412251 - MIR SINE MIR -1 261 179 2141 124 7 0 chr20 36741631 36741914 -35411968 + AluSx SINE Alu 3 287 -25 473 220 124 133 chr20 36741914 36742071 -35411811 - MIR SINE MIR -83 179 23 234 246 31 0 chr20 36742964 36743029 -35410853 - MIR SINE MIR -96 166 100 491 250 32 60 chr20 36743534 36743749 -35410133 - MIR SINE MIR -43 219 13 1123 99 0 43 chr20 36744234 36744395 -35409487 + AluSg/x SINE Alu 146 299 -13 464 164 98 33 chr20 36744569 36744691 -35409191 + L1MB7 LINE L1 6055 6184 0 216 204 0 0 chr20 36744732 36744776 -35409106 + L2 LINE L2 3270 3313 0 26 30 0 0 chr20 36744785 36744818 -35409064 + AT_rich Low_complexity Low_complexity 1 33 0 332 261 0 54 chr20 36744848 36744959 -35408923 - MIR SINE MIR -69 193 89 2107 123 20 0 chr20 36745340 36745632 -35408250 + AluSx SINE Alu 1 298 -14 483 145 0 0 chr20 36745635 36745718 -35408164 + (GGGGA)n Simple_repeat Simple_repeat 3 85 0 211 301 36 12 chr20 36745949 36746032 -35407850 - MIR3 SINE MIR -117 91 7 555 244 122 39 chr20 36746153 36746358 -35407524 - MIR SINE MIR -12 250 29 219 310 14 14 chr20 36746748 36746819 -35407063 - L2 LINE L2 -20 3252 3182 1597 164 32 86 chr20 36746825 36746983 -35406899 + MLT1A1 LTR MaLR 1 166 -199 522 119 18 83 chr20 36746983 36747092 -35406790 + U13 snRNA snRNA 3 104 0 1597 164 32 86 chr20 36747092 36747306 -35406576 + MLT1A1 LTR MaLR 166 353 -12 250 361 21 7 chr20 36747421 36747565 -35406317 + MIR3 SINE MIR 9 154 -54 192 297 93 8 chr20 36747960 36748078 -35405804 - MIR3 SINE MIR -74 134 7 451 272 74 19 chr20 36748714 36748876 -35405006 + MIR3 SINE MIR 32 202 -6 218 337 47 0 chr20 36749319 36749405 -35404477 + MIR SINE MIR 57 146 -116 1988 132 33 0 chr20 36749452 36749749 -35404133 - AluSx SINE Alu 0 308 3 193 288 68 0 chr20 36749856 36749915 -35403967 - MIR SINE MIR -6 256 194 491 273 88 90 chr20 36749936 36749986 -35403896 + L2 LINE L2 2665 2714 -558 2428 65 0 32 chr20 36749986 36750318 -35403564 + AluY SINE Alu 1 311 0 491 273 88 90 chr20 36750318 36750629 -35403253 + L2 LINE L2 2714 3023 -249 239 312 32 32 chr20 36750707 36750800 -35403082 + L2 LINE L2 3221 3313 0 198 244 0 0 chr20 36750835 36750880 -35403002 + L2 LINE L2 3210 3254 -18 624 311 26 4 chr20 36751331 36751559 -35402323 + MIR SINE MIR 29 261 -1 2601 63 3 0 chr20 36752383 36752685 -35401197 - AluSp SINE Alu -10 303 1 511 247 93 6 chr20 36753595 36753757 -35400125 + MIR3 SINE MIR 22 197 -11 391 318 93 13 chr20 36754107 36754258 -35399624 + MIR SINE MIR 28 190 -72 185 349 83 0 chr20 36755588 36755720 -35398162 + L2 LINE L2 1994 2136 -1178 744 200 65 35 chr20 36755777 36755947 -35397935 - FAM SINE Alu 0 175 1 2312 123 0 0 chr20 36755950 36756260 -35397622 - AluSx SINE Alu -1 311 2 21 36 0 0 chr20 36756264 36756292 -35397590 + AT_rich Low_complexity Low_complexity 1 28 0 497 245 80 37 chr20 36756463 36756726 -35397156 - L1ME2 LINE L1 -327 5837 5565 261 0 0 0 chr20 36756807 36756836 -35397046 + (TC)n Simple_repeat Simple_repeat 2 30 0 2264 105 3 10 chr20 36756836 36756995 -35396887 - AluSq SINE Alu -20 293 135 2413 84 3 0 chr20 36756995 36757294 -35396588 - AluSp SINE Alu -13 300 1 2264 105 3 10 chr20 36757294 36757429 -35396453 - AluSq SINE Alu -178 135 1 320 317 17 17 chr20 36757580 36757700 -35396182 + MIR SINE MIR 103 222 -40 269 336 55 0 chr20 36757710 36757820 -35396062 - MIR SINE MIR -74 134 19 1730 190 108 40 chr20 36758147 36758620 -35395262 - MLT1D LTR MaLR 0 505 1 363 266 216 0 chr20 36759358 36759497 -35394385 + MIR3 SINE MIR 37 205 -3 2125 110 13 10 chr20 36759594 36759893 -35393989 + AluJb SINE Alu 1 300 -12 211 282 120 43 chr20 36759991 36760108 -35393774 - MIR SINE MIR -67 141 16 339 186 0 14 chr20 36760122 36760192 -35393690 - MIR SINE MIR -170 92 24 395 331 43 12 chr20 36760311 36760474 -35393408 + MIR3 SINE MIR 35 202 -6 2212 123 3 13 chr20 36760872 36761182 -35392700 - AluSx SINE Alu -5 307 1 592 273 60 0 chr20 36761216 36761399 -35392483 - MIR SINE MIR -53 209 16 444 288 74 0 chr20 36761432 36761595 -35392287 + MIR SINE MIR 23 197 -65 561 139 24 72 chr20 36762153 36762199 -35391683 - L1MB3 LINE L1 -7 6176 6129 1830 157 0 30 chr20 36762199 36762499 -35391383 - AluJb SINE Alu -21 291 1 561 139 24 72 chr20 36762499 36762598 -35391284 - L1MB3 LINE L1 -54 6129 6027 1609 202 10 3 chr20 36762598 36762890 -35390992 - AluJo SINE Alu -5 307 14 1474 165 21 118 chr20 36762894 36763082 -35390800 - AluJb SINE Alu -5 307 165 2036 150 3 7 chr20 36763082 36763389 -35390493 - AluJb SINE Alu 0 312 7 1474 165 21 118 chr20 36763389 36763540 -35390342 - AluJb SINE Alu -147 165 1 2230 112 3 0 chr20 36763547 36763843 -35390039 - AluSp SINE Alu -16 297 1 561 139 24 72 chr20 36763843 36764276 -35389606 - L1MB3 LINE L1 -165 6018 5613 2211 90 13 7 chr20 36764282 36764581 -35389301 - AluSx SINE Alu -11 301 1 771 311 28 0 chr20 36764595 36764843 -35389039 - MIR SINE MIR -6 256 2 344 236 0 22 chr20 36765465 36765554 -35388328 - L1MC5 LINE L1 -50 7911 7825 333 233 39 43 chr20 36765630 36765740 -35388142 + MIR3 SINE MIR 56 165 -67 2426 94 7 0 chr20 36765740 36766049 -35387833 - AluSp SINE Alu -2 311 1 333 233 39 43 chr20 36766049 36766062 -35387820 + MIR3 SINE MIR 165 177 -55 2076 134 0 49 chr20 36766062 36766390 -35387492 - AluSx SINE Alu 0 312 1 333 233 39 43 chr20 36766390 36766401 -35387481 + MIR3 SINE MIR 177 190 -42 331 254 180 17 chr20 36766415 36766563 -35387319 + MIR SINE MIR 34 195 -62 194 241 76 89 chr20 36767198 36767277 -35386605 + MIR SINE MIR 74 151 -57 705 300 44 58 chr20 36767740 36767845 -35386037 - L1ME4a LINE L1 -92 6029 5924 2451 92 3 6 chr20 36767845 36768159 -35385723 + AluSq SINE Alu 1 313 0 705 300 44 58 chr20 36768159 36768573 -35385309 - L1ME4a LINE L1 -197 5924 5517 195 42 0 0 chr20 36768757 36768781 -35385101 + (CTGTG)n Simple_repeat Simple_repeat 3 26 0 435 19 0 0 chr20 36769150 36769202 -35384680 + (TG)n Simple_repeat Simple_repeat 2 53 0 231 133 0 0 chr20 36769719 36769764 -35384118 + (TG)n Simple_repeat Simple_repeat 1 45 0 2528 90 0 0 chr20 36769860 36770172 -35383710 - AluSx SINE Alu 0 312 1 443 234 170 0 chr20 36770174 36770315 -35383567 - MIR3 SINE MIR -27 181 17 620 237 216 0 chr20 36770796 36770986 -35382896 - MIR SINE MIR -2 260 30 603 189 31 99 chr20 36771038 36771181 -35382701 - MER5A DNA MER1_type -8 181 53 1884 75 0 36 chr20 36771181 36771434 -35382448 + AluSg1 SINE Alu 55 298 -11 603 189 31 99 chr20 36771434 36771481 -35382401 - MER5A DNA MER1_type -136 53 4 256 269 119 22 chr20 36771534 36771668 -35382214 + L2 LINE L2 2601 2747 -567 567 177 323 0 chr20 36771687 36771845 -35382037 + MER3 DNA MER1_type 1 209 0 1971 171 0 3 chr20 36772884 36773194 -35380688 + AluJb SINE Alu 1 309 -3 315 157 259 19 chr20 36773315 36773423 -35380459 - L1ME3A LINE L1 -10 6160 6027 619 254 64 47 chr20 36773446 36773682 -35380200 + MIR SINE MIR 4 243 -19 466 266 49 0 chr20 36775091 36775234 -35378648 - MIR SINE MIR -34 228 79 249 236 182 36 chr20 36775802 36775912 -35377970 + L2 LINE L2 2947 3072 -200 934 178 138 57 chr20 36775932 36776082 -35377800 - MER33 DNA MER1_type -2263 322 186 2387 84 0 10 chr20 36776082 36776378 -35377504 - AluSq SINE Alu -8 305 13 934 178 138 57 chr20 36776378 36776525 -35377357 - MER33 DNA MER1_type -2399 186 1 670 264 92 13 chr20 36776544 36776771 -35377111 + MIR SINE MIR 11 255 -7 199 307 149 35 chr20 36776811 36776925 -35376957 + L2 LINE L2 3144 3270 -2 284 275 12 25 chr20 36777007 36777087 -35376795 + MIR SINE MIR 71 149 -59 362 264 85 0 chr20 36777384 36777490 -35376392 - MIR SINE MIR -58 150 53 188 300 20 0 chr20 36777585 36777635 -35376247 + MIR SINE MIR 110 160 -102 324 270 40 20 chr20 36777779 36777839 -35376043 + MIR SINE MIR 83 147 -115 2665 26 0 20 chr20 36777839 36778144 -35375738 + AluY SINE Alu 1 299 -12 324 270 40 20 chr20 36778144 36778183 -35375699 + MIR SINE MIR 147 184 -78 24 32 0 0 chr20 36778234 36778265 -35375617 + AT_rich Low_complexity Low_complexity 1 31 0 407 267 82 15 chr20 36779664 36779799 -35374083 - MIR3 SINE MIR -32 176 33 292 289 13 32 chr20 36780515 36780671 -35373211 + G-rich Low_complexity Low_complexity 2 154 0 192 77 0 0 chr20 36780733 36780759 -35373123 + (CCG)n Simple_repeat Simple_repeat 3 28 0 29 28 0 0 chr20 36780811 36780847 -35373035 + GC_rich Low_complexity Low_complexity 1 36 0 321 301 0 26 chr20 36782476 36782589 -35371293 - MIR3 SINE MIR -86 122 13 2237 93 0 0 chr20 36782966 36783255 -35370627 + AluSc SINE Alu 4 292 -17 629 243 178 5 chr20 36783318 36783532 -35370350 - MIR SINE MIR -10 252 2 845 214 63 48 chr20 36783970 36784222 -35369660 - MIR SINE MIR 0 262 7 339 284 113 49 chr20 36784270 36784597 -35369285 - L2 LINE L2 -71 3201 2854 478 284 101 41 chr20 36784631 36784849 -35369033 + MIR SINE MIR 26 256 -6 274 294 54 0 chr20 36785307 36785399 -35368483 + L1ME LINE L1 5713 5809 -312 192 170 85 0 chr20 36785653 36785700 -35368182 - MIR SINE MIR -75 133 83 604 302 25 5 chr20 36785833 36786035 -35367847 + MIR SINE MIR 50 255 -7 2430 88 0 19 chr20 36786321 36786639 -35367243 + AluSx SINE Alu 1 312 0 356 269 89 70 chr20 36786669 36786985 -35366897 - L1ME4a LINE L1 -94 6027 5706 223 274 0 0 chr20 36787298 36787360 -35366522 + MIR SINE MIR 86 147 -115 193 229 0 0 chr20 36787376 36787411 -35366471 - L2 LINE L2 -23 3249 3215 2167 99 3 10 chr20 36787435 36787774 -35366108 - AluSx SINE Alu 0 357 21 1797 159 13 23 chr20 36787781 36788083 -35365799 - AluJo SINE Alu -13 299 1 281 242 165 7 chr20 36788139 36788240 -35365642 - MIR SINE MIR -95 113 6 364 211 0 56 chr20 36788417 36788507 -35365375 + MIR3 SINE MIR 14 98 -110 356 216 207 0 chr20 36789180 36789291 -35364591 - L1ME4a LINE L1 0 6121 5988 497 281 12 24 chr20 36789312 36789479 -35364403 - MIR SINE MIR -10 252 88 944 236 152 39 chr20 36789555 36789875 -35364007 - LTR33 LTR ERVL 0 521 144 2023 125 59 0 chr20 36789875 36790163 -35363719 - AluSx SINE Alu -7 305 1 944 236 152 39 chr20 36790163 36790249 -35363633 - LTR33 LTR ERVL -377 144 69 2170 120 3 19 chr20 36790689 36791005 -35362877 - AluSx SINE Alu -1 311 1 2189 136 0 0 chr20 36791006 36791301 -35362581 - AluSx SINE Alu -17 295 1 227 302 36 72 chr20 36791341 36791436 -35362446 - MIR SINE MIR -62 200 110 2474 90 0 0 chr20 36791436 36791735 -35362147 + AluSx SINE Alu 1 299 -13 227 302 36 72 chr20 36791735 36791778 -35362104 - MIR SINE MIR -152 110 67 276 303 0 0 chr20 36791960 36792036 -35361846 + MIR SINE MIR 79 154 -108 919 214 21 34 chr20 36792234 36792468 -35361414 + MIR SINE MIR 32 262 0 361 300 60 13 chr20 36792464 36792614 -35361268 - L2 LINE L2 -36 3277 3121 * 1693 147 93 7 chr20 36792624 36792903 -35360979 + AluSx SINE Alu 1 303 -9 697 133 7 15 chr20 36792926 36793061 -35360821 + L1MB4 LINE L1 6013 6146 -34 447 299 46 94 chr20 36793183 36793444 -35360438 - L2 LINE L2 -345 2969 2734 2126 120 0 3 chr20 36793444 36793773 -35360109 + AluSx SINE Alu 1 328 0 447 299 46 94 chr20 36793773 36793947 -35359935 - L2 LINE L2 -580 2734 2553 453 335 28 56 chr20 36794528 36794556 -35359326 - MIR SINE MIR -14 248 221 2052 95 3 76 chr20 36794556 36794871 -35359011 - AluSc SINE Alu -17 292 1 453 335 28 56 chr20 36794871 36794965 -35358917 - MIR SINE MIR -41 221 126 2223 105 17 3 chr20 36794965 36795259 -35358623 + AluSg SINE Alu 1 298 -12 453 335 28 56 chr20 36795259 36795386 -35358496 - MIR SINE MIR -136 126 5 25 65 0 0 chr20 36796160 36796206 -35357676 + AT_rich Low_complexity Low_complexity 1 46 0 251 276 143 0 chr20 36796341 36796439 -35357443 - L1ME4a LINE L1 -65 6056 5945 2200 99 36 10 chr20 36798095 36798398 -35355484 - AluSx SINE Alu -1 311 1 2359 110 3 0 chr20 36798609 36798918 -35354964 - AluSx SINE Alu -1 311 2 186 43 0 0 chr20 36798957 36798980 -35354902 + (TC)n Simple_repeat Simple_repeat 2 24 0 221 256 11 56 chr20 36799615 36799705 -35354177 + CT-rich Low_complexity Low_complexity 2 87 0 441 299 65 39 chr20 36800074 36800125 -35353757 - MIR SINE MIR -6 256 208 1644 132 82 69 chr20 36800125 36800284 -35353598 - AluJo SINE Alu -5 307 141 2129 133 0 19 chr20 36800284 36800592 -35353290 - AluSx SINE Alu -10 302 1 1644 132 82 69 chr20 36800592 36800735 -35353147 - AluJo SINE Alu -171 141 1 441 299 65 39 chr20 36800735 36800914 -35352968 - MIR SINE MIR -54 208 20 196 309 128 21 chr20 36801018 36801112 -35352770 - MIR3 SINE MIR -46 162 59 2420 107 0 0 chr20 36802641 36802951 -35350931 - AluSx SINE Alu -2 310 1 2102 118 3 55 chr20 36804794 36805124 -35348758 + AluSq SINE Alu 1 313 0 200 218 73 0 chr20 36805198 36805253 -35348629 - MIR SINE MIR -84 124 66 334 280 20 0 chr20 36805395 36805495 -35348387 - MIR SINE MIR -86 122 21 276 296 66 62 chr20 36806066 36806309 -35347573 - L3 LINE CR1 -84 1493 1250 324 290 138 0 chr20 36806404 36806549 -35347333 + MIR SINE MIR 88 252 -10 618 235 206 5 chr20 36806569 36806773 -35347109 + MIR SINE MIR 2 246 -16 232 67 0 44 chr20 36806781 36806826 -35347056 + (TTA)n Simple_repeat Simple_repeat 2 44 0 570 226 111 46 chr20 36806889 36807106 -35346776 + MIR SINE MIR 14 244 -18 221 391 8 8 chr20 36807430 36807563 -35346319 - L3 LINE CR1 -710 867 735 326 229 46 9 chr20 36807689 36807798 -35346084 - MER103 DNA DNA -8 158 46 806 219 36 0 chr20 36807861 36808053 -35345829 + MIR SINE MIR 35 233 -29 201 121 0 0 chr20 36808060 36808093 -35345789 + (TTTC)n Simple_repeat Simple_repeat 4 36 0 281 244 58 0 chr20 36808105 36808191 -35345691 + MIR SINE MIR 96 186 -76 263 307 165 29 chr20 36808522 36808791 -35345091 - Charlie8 DNA MER1_type -2142 275 47 2154 138 0 0 chr20 36809982 36810279 -35343603 + AluSx SINE Alu 11 307 -5 602 313 36 5 chr20 36811690 36811885 -35341997 + MIR SINE MIR 7 207 -55 212 311 29 39 chr20 36811962 36812065 -35341817 + MIR3 SINE MIR 56 157 -51 278 211 332 0 chr20 36812066 36812189 -35341693 - MER20 DNA MER1_type 0 219 56 297 314 171 0 chr20 36812557 36812697 -35341185 + MER117 DNA MER1_type 34 197 0 1220 208 37 0 chr20 36812915 36813156 -35340726 + MIR SINE MIR 13 262 0 414 317 41 7 chr20 36813975 36814120 -35339762 + L2 LINE L2 3122 3271 -1 218 313 0 12 chr20 36814121 36814204 -35339678 + (TGAA)n Simple_repeat Simple_repeat 2 83 0 549 0 0 0 chr20 36814601 36814662 -35339220 + (CA)n Simple_repeat Simple_repeat 2 62 0 252 0 0 0 chr20 36814661 36814689 -35339193 + (GA)n Simple_repeat Simple_repeat 2 29 0 * 1094 100 7 0 chr20 36814717 36814857 -35339025 + AluSq/x SINE Alu 1 141 -171 437 100 0 0 chr20 36814857 36814927 -35338955 + Alu SINE Alu 239 308 -1 608 313 97 45 chr20 36815091 36815893 -35337989 + L2 LINE L2 2467 3312 -1 1881 140 31 7 chr20 36815934 36816227 -35337655 + AluJo SINE Alu 13 312 0 337 292 0 44 chr20 36817469 36817582 -35336300 + MER5A DNA MER1_type 9 116 -73 376 270 142 7 chr20 36817757 36817905 -35335977 + MIR SINE MIR 82 249 -13 2424 101 16 0 chr20 36817963 36818270 -35335612 + AluSx SINE Alu 1 312 0 2332 99 3 10 chr20 36818270 36818574 -35335308 + AluSc SINE Alu 1 302 -7 260 374 46 39 chr20 36818647 36818928 -35334954 - L2 LINE L2 -5 3267 2985 272 270 108 60 chr20 36819209 36819394 -35334488 + MIR SINE MIR 20 213 -49 587 306 72 10 chr20 36819817 36820010 -35333872 - MIR SINE MIR -12 250 46 248 203 68 14 chr20 36820032 36820106 -35333776 + MIR SINE MIR 42 119 -89 327 322 77 0 chr20 36822175 36822318 -35331564 + MIR3 SINE MIR 23 176 -32 462 286 23 0 chr20 36824336 36824469 -35329413 + MER5A DNA MER1_type 50 185 -4 749 231 77 0 chr20 36824839 36825008 -35328874 + MIR SINE MIR 43 224 -38 390 311 113 0 chr20 36825190 36825341 -35328541 - MIR3 SINE MIR -13 195 28 211 297 93 42 chr20 36826175 36826293 -35327589 + MIR SINE MIR 89 212 -50 228 263 0 0 chr20 36826791 36826867 -35327015 + CT-rich Low_complexity Low_complexity 1 76 0 199 311 159 42 chr20 36828250 36828514 -35325368 - L3 LINE CR1 -150 1427 1133 2248 92 27 0 chr20 36828531 36828660 -35325222 + AluSx SINE Alu 1 125 -187 234 0 0 0 chr20 36828660 36828686 -35325196 + (TAA)n Simple_repeat Simple_repeat 2 27 0 2248 92 27 0 chr20 36828686 36828850 -35325032 + AluSx SINE Alu 125 302 -10 345 273 87 37 chr20 36829287 36829448 -35324434 + MIR SINE MIR 84 252 -10 361 252 58 58 chr20 36830077 36830216 -35323666 + MIR3 SINE MIR 10 148 -60 1222 113 0 23 chr20 36830491 36830668 -35323214 - AluSp SINE Alu -4 309 137 2347 93 0 3 chr20 36830669 36830960 -35322922 - AluSc SINE Alu -19 290 1 430 295 80 2 chr20 36831319 36831486 -35322396 + MIR3 SINE MIR 27 204 -4 187 264 33 55 chr20 36836675 36836766 -35317116 + L2 LINE L2 3008 3096 -217 199 178 22 22 chr20 36836852 36836897 -35316985 + L2 LINE L2 3266 3310 -3 1155 113 5 54 chr20 36836938 36837123 -35316759 + FRAM SINE Alu 1 175 -1 2271 116 20 0 chr20 36837126 36837428 -35316454 + AluSx SINE Alu 3 310 -2 302 303 0 20 chr20 36837475 36837574 -35316308 + MER102a DNA MER1_type 234 330 0 2236 121 0 0 chr20 36837591 36837889 -35315993 + AluSx SINE Alu 1 298 -14 1809 154 47 23 chr20 36839135 36839434 -35314448 + AluJo SINE Alu 1 306 -6 193 156 0 0 chr20 36839558 36839591 -35314291 + MIR SINE MIR 74 105 -157 365 317 92 16 chr20 36839861 36840164 -35313718 - L1MC4a LINE L1 -1908 5900 5575 243 247 106 24 chr20 36840951 36841036 -35312846 + MIR SINE MIR 59 150 -112 610 283 26 39 chr20 36841124 36841354 -35312528 - MIR SINE MIR -33 229 3 206 206 0 0 chr20 36841710 36841744 -35312138 + (TCCA)n Simple_repeat Simple_repeat 2 35 0 193 223 233 19 chr20 36841744 36841847 -35312035 - L2 LINE L2 0 3313 3189 * 290 253 11 23 chr20 36841830 36841917 -35311965 - L2 LINE L2 0 3272 3187 * 681 230 5 63 chr20 36841916 36842107 -35311775 + MIR SINE MIR 60 239 -23 309 272 72 73 chr20 36842205 36842612 -35311270 - L2 LINE L2 -203 3069 2661 318 318 48 0 chr20 36842641 36842767 -35311115 - L2 LINE L2 -2 3311 3180 632 172 210 6 chr20 36842957 36843114 -35310768 + MER5A DNA MER1_type 1 189 0 670 228 68 14 chr20 36844132 36844382 -35309500 + MIR SINE MIR 3 262 0 306 257 38 29 chr20 36844497 36844602 -35309280 - MIR SINE MIR -67 141 36 204 240 307 13 chr20 36844620 36844695 -35309187 + L2 LINE L2 3176 3272 0 243 333 11 11 chr20 36845278 36845371 -35308511 + MIR3 SINE MIR 13 105 -103 216 286 26 13 chr20 36846325 36846402 -35307480 - L2 LINE L2 -1 3312 3235 270 284 88 61 chr20 36847383 36847531 -35306351 - L2 LINE L2 -5 3267 3116 299 275 196 0 chr20 36848133 36848271 -35305611 + MIR3 SINE MIR 36 200 -8 2225 111 0 7 chr20 36848920 36849217 -35304665 - AluY SINE Alu -16 295 1 1059 111 0 0 chr20 36849217 36849352 -35304530 - AluSq/x SINE Alu -176 136 2 494 256 8 0 chr20 36849562 36849683 -35304199 + L1ME3 LINE L1 5854 5975 -187 444 251 34 50 chr20 36849726 36849919 -35303963 + L1ME3 LINE L1 5979 6162 0 1015 160 52 45 chr20 36850117 36850385 -35303497 + MER33 DNA MER1_type 1 226 -2359 2015 132 14 7 chr20 36850385 36850680 -35303202 + AluSx SINE Alu 1 297 -15 1015 160 52 45 chr20 36850680 36850740 -35303142 + MER33 DNA MER1_type 226 284 -40 2282 113 0 0 chr20 36850848 36851139 -35302743 - AluSx SINE Alu -19 293 3 342 130 0 0 chr20 36851149 36851203 -35302679 + MER33 DNA MER1_type 271 324 0 268 271 31 42 chr20 36851368 36851464 -35302418 - MER5A DNA MER1_type -31 158 64 402 278 53 20 chr20 36851516 36851667 -35302215 + MIR3 SINE MIR 3 158 -50 310 283 10 20 chr20 36852256 36852355 -35301527 + MIR SINE MIR 56 153 -109 410 296 0 43 chr20 36852364 36852581 -35301301 - MIR SINE MIR 0 262 16 195 289 0 0 chr20 36852651 36852703 -35301179 + MIR SINE MIR 211 262 0 207 0 0 0 chr20 36852946 36852969 -35300913 + (CAAAC)n Simple_repeat Simple_repeat 2 24 0 2027 144 13 7 chr20 36853052 36853357 -35300525 + AluJo SINE Alu 1 307 -5 350 273 167 0 chr20 36853409 36853559 -35300323 + MIR SINE MIR 73 247 -15 242 259 235 0 chr20 36854016 36854101 -35299781 + MIR SINE MIR 41 145 -63 331 291 91 0 chr20 36854167 36854277 -35299605 - L2 LINE L2 -5 3267 3148 418 249 129 91 chr20 36854313 36854439 -35299443 - MIR SINE MIR 0 262 142 980 178 6 0 chr20 36854439 36854602 -35299280 + FAM SINE Alu 1 164 -11 418 249 129 91 chr20 36854602 36854716 -35299166 - MIR SINE MIR -120 142 13 200 273 30 15 chr20 36855000 36855066 -35298816 + MIR SINE MIR 25 91 -171 640 220 0 0 chr20 36855066 36855184 -35298698 - FAM SINE Alu -57 128 11 201 108 0 0 chr20 36855505 36855542 -35298340 + (TA)n Simple_repeat Simple_repeat 2 38 0 278 210 32 0 chr20 36857385 36857447 -35296435 - L2 LINE L2 -4 3268 3205 487 313 43 39 chr20 36858301 36858496 -35295386 + MIR3 SINE MIR 5 201 -7 407 35 18 0 chr20 36858831 36858888 -35294994 + (TC)n Simple_repeat Simple_repeat 2 59 0 628 285 119 34 chr20 36858964 36859350 -35294532 - L2 LINE L2 -5 3308 2890 490 221 35 74 chr20 36859439 36859536 -35294346 + MER113 DNA MER1_type? 8 107 -414 2437 95 0 3 chr20 36859536 36859842 -35294040 + AluSx SINE Alu 1 305 -7 490 221 35 74 chr20 36859842 36859975 -35293907 + MER113 DNA MER1_type? 107 229 -292 334 316 65 39 chr20 36860118 36860273 -35293609 - L1MC4 LINE L1 -1277 6765 6607 1014 101 137 0 chr20 36860655 36860823 -35293059 + MER20 DNA MER1_type 29 219 0 393 249 179 18 chr20 36861214 36861379 -35292503 + MIR SINE MIR 2 186 -63 2405 85 0 0 chr20 36861393 36861686 -35292196 + AluSx SINE Alu 1 293 -19 369 242 0 11 chr20 36861701 36861792 -35292090 + MLT2C2 LTR ERVL 373 462 -2 270 259 37 37 chr20 36861845 36861953 -35291929 - L2 LINE L2 0 3272 3165 234 316 68 15 chr20 36862731 36862864 -35291018 + MIR SINE MIR 18 157 -105 386 310 220 13 chr20 36863012 36863442 -35290440 - L2 LINE L2 -194 3078 2544 333 247 27 0 chr20 36863518 36863591 -35290291 - L2 LINE L2 0 3272 3198 442 0 0 0 chr20 36863770 36863819 -35290063 + (TTA)n Simple_repeat Simple_repeat 2 180 0 2094 109 3 11 chr20 36863819 36864103 -35289779 - AluSg SINE Alu -1 330 1 726 235 88 21 chr20 36864125 36864363 -35289519 + MER112 DNA MER1_type 1 254 -2 2113 140 3 0 chr20 36864494 36864802 -35289080 + AluSx SINE Alu 1 309 -3 289 324 50 22 chr20 36864819 36864958 -35288924 + L2 LINE L2 3122 3264 -8 205 346 26 0 chr20 36865169 36865247 -35288635 + MIR SINE MIR 70 149 -59 199 347 165 8 chr20 36865512 36865633 -35288249 + MIR3 SINE MIR 6 145 -63 313 295 188 0 chr20 36865678 36865790 -35288092 + MIR SINE MIR 118 250 -12 205 293 29 103 chr20 36866733 36866907 -35286975 + MER5A DNA MER1_type 29 189 0 221 261 0 0 chr20 36866948 36866994 -35286888 - MIR SINE MIR -133 75 30 274 233 44 11 chr20 36867160 36867250 -35286632 - L1ME4a LINE L1 -70 6051 5959 652 306 229 26 chr20 36867279 36867524 -35286358 - L1ME4a LINE L1 -118 6003 5809 2035 90 47 7 chr20 36867524 36867801 -35286081 + AluSq SINE Alu 1 288 -25 652 306 229 26 chr20 36867801 36868137 -35285745 - L1ME4a LINE L1 -312 5809 5304 864 171 0 26 chr20 36868160 36868312 -35285570 - AluJb SINE Alu -5 307 160 2397 57 0 11 chr20 36868384 36868712 -35285170 - AluY SINE Alu 0 325 1 1684 176 18 0 chr20 36868874 36869147 -35284735 - AluJo SINE Alu -9 303 26 1010 194 152 23 chr20 36869716 36869933 -35283949 - MIR SINE MIR -10 252 8 193 260 200 50 chr20 36870104 36870204 -35283678 + MIR SINE MIR 76 190 -72 556 290 25 12 chr20 36870233 36870395 -35283487 + MER5A DNA MER1_type 25 188 -1 244 348 167 0 chr20 36870530 36870668 -35283214 - L2 LINE L2 -9 3263 3103 1905 138 7 21 chr20 36871758 36872041 -35281841 + AluJo SINE Alu 1 279 -33 489 278 80 25 chr20 36872043 36872205 -35281677 - MIR SINE MIR -69 193 23 225 0 0 0 chr20 36872878 36872903 -35280979 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 368 311 9 19 chr20 36873006 36873112 -35280770 - L2 LINE L2 -1 3271 3167 211 303 173 40 chr20 36873253 36873576 -35280306 + L2 LINE L2 2564 2929 -385 2188 111 0 3 chr20 36873615 36873912 -35279970 + AluSq SINE Alu 11 306 -7 685 126 49 49 chr20 36873912 36874055 -35279827 - L1MB1 LINE L1 -6 6162 6020 212 224 26 13 chr20 36874135 36874211 -35279671 + CT-rich Low_complexity Low_complexity 2 78 0 1944 114 0 8 chr20 36874345 36874609 -35279273 - AluSx SINE Alu -2 310 49 519 250 56 14 chr20 36875675 36875819 -35278063 - MIR SINE MIR -56 206 57 526 256 35 17 chr20 36876601 36876773 -35277109 + L1ME1 LINE L1 5942 6116 -50 1142 174 8 58 chr20 36876874 36876936 -35276946 + AluJo SINE Alu 84 148 -164 1922 170 3 0 chr20 36876936 36877230 -35276652 + AluJb SINE Alu 3 297 -15 1142 174 8 58 chr20 36877230 36877408 -35276474 + AluJo SINE Alu 148 312 0 483 292 92 64 chr20 36878323 36878714 -35275168 - L2 LINE L2 0 3272 2871 4251 154 11 7 chr20 36879725 36880477 -35273405 + L1MB3 LINE L1 5254 6008 -175 1215 169 55 0 chr20 36880477 36880713 -35273169 + L1MB3 LINE L1 5935 6183 0 274 75 57 19 chr20 36880726 36880754 -35273128 + L1MB3 LINE L1 6129 6154 -29 1791 160 89 3 chr20 36880754 36881091 -35272791 - MER47A DNA MER2_type 0 366 1 274 75 57 19 chr20 36881091 36881115 -35272767 + L1MB3 LINE L1 6154 6183 0 1519 184 40 29 chr20 36883263 36883577 -35270305 + L1MB7 LINE L1 5816 6136 -48 2411 64 17 7 chr20 36883577 36883873 -35270009 + AluY SINE Alu 1 299 -12 1519 184 40 29 chr20 36883873 36883906 -35269976 + L1MB7 LINE L1 6136 6167 -17 232 324 14 14 chr20 36883907 36883978 -35269904 - MER5A DNA MER1_type -45 144 74 333 0 0 0 chr20 36884162 36884199 -35269683 + (CA)n Simple_repeat Simple_repeat 2 38 0 395 269 93 26 chr20 36884218 36884411 -35269471 - MIR SINE MIR -36 226 21 317 316 53 0 chr20 36884486 36884581 -35269301 + MIR SINE MIR 54 153 -55 2481 64 37 0 chr20 36884586 36884884 -35268998 + AluSc SINE Alu 1 309 0 1152 271 76 58 chr20 36886592 36886737 -35267145 - L2 LINE L2 -109 3204 3063 2598 60 3 0 chr20 36886737 36887038 -35266844 - AluY SINE Alu -9 302 1 1152 271 76 58 chr20 36887038 36887370 -35266512 - L2 LINE L2 -250 3063 2703 950 173 42 0 chr20 36887370 36887538 -35266344 - FAM SINE Alu 0 175 1 1152 271 76 58 chr20 36887538 36887746 -35266136 - L2 LINE L2 -610 2703 2500 1915 143 3 17 chr20 36888138 36888432 -35265450 + AluJo SINE Alu 8 297 -15 869 153 0 0 chr20 36889200 36889324 -35264558 + FLAM_C SINE Alu 4 127 -6 303 172 52 0 chr20 36889546 36889604 -35264278 - L1M LINE L1 -750 5371 5311 24 0 0 0 chr20 36889849 36889873 -35264009 + AT_rich Low_complexity Low_complexity 1 24 0 419 324 41 44 chr20 36890399 36890714 -35263168 + MLT1K LTR MaLR 212 525 -63 323 227 216 10 chr20 36890804 36890901 -35262981 - MIR3 SINE MIR -6 202 86 354 248 147 64 chr20 36891185 36891403 -35262479 - MIR SINE MIR -12 250 15 534 204 72 20 chr20 36891518 36891614 -35262268 - Charlie8 DNA MER1_type -2254 163 55 423 0 0 0 chr20 36891614 36891661 -35262221 + (CA)n Simple_repeat Simple_repeat 2 48 0 534 204 72 20 chr20 36891661 36891716 -35262166 - Charlie8 DNA MER1_type -2362 55 4 280 273 124 0 chr20 36892113 36892234 -35261648 + MIR3 SINE MIR 10 145 -63 455 306 107 25 chr20 36893053 36893295 -35260587 + L3 LINE CR1 1301 1562 -15 509 243 53 13 chr20 36894112 36894264 -35259618 + MIR SINE MIR 8 165 -97 263 242 126 21 chr20 36894687 36894782 -35259100 - MIR3 SINE MIR 0 208 104 * 374 290 27 25 chr20 36894763 36894922 -35258960 - MIR3 SINE MIR -16 192 31 24 0 0 0 chr20 36895233 36895257 -35258625 + GC_rich Low_complexity Low_complexity 1 24 0 630 300 109 19 chr20 36895436 36895913 -35257969 - L1ME4a LINE L1 -3 6118 5599 343 293 93 14 chr20 36895976 36896116 -35257766 - HAL1b LINE L1 -11 1337 1187 2442 93 0 0 chr20 36896162 36896472 -35257410 - AluY SINE Alu -1 310 1 1812 174 13 35 chr20 36896524 36896840 -35257042 - AluJo SINE Alu -3 309 1 272 325 76 10 chr20 36896845 36897042 -35256840 - L1ME LINE L1 -297 5824 5615 226 170 19 0 chr20 36897042 36897095 -35256787 + T-rich Low_complexity Low_complexity 1 54 0 277 288 0 0 chr20 36897855 36897921 -35255961 + GA-rich Low_complexity Low_complexity 2 67 0 1908 137 20 13 chr20 36898022 36898322 -35255560 + AluJo SINE Alu 1 302 -10 2253 119 3 0 chr20 36899074 36899385 -35254497 + AluSx SINE Alu 1 312 0 563 207 26 9 chr20 36899468 36899584 -35254298 - MIR SINE MIR -94 168 51 332 214 14 14 chr20 36899767 36899837 -35254045 + L2 LINE L2 3197 3266 -6 687 171 86 0 chr20 36899839 36899956 -35253926 + FLAM_A SINE Alu 1 127 -6 204 327 36 36 chr20 36900016 36900126 -35253756 + MIR SINE MIR 38 147 -61 189 0 0 0 chr20 36900374 36900395 -35253487 + (CCCCAG)n Simple_repeat Simple_repeat 1 21 0 339 234 262 0 chr20 36900916 36901057 -35252825 + MIR SINE MIR 29 206 -56 290 321 60 30 chr20 36901595 36901763 -35252119 - L2 LINE L2 -181 3091 2919 294 202 0 112 chr20 36902200 36902289 -35251593 - MIR SINE MIR -75 187 109 757 293 56 5 chr20 36902316 36902531 -35251351 + MIR SINE MIR 28 253 -9 282 263 35 0 chr20 36902564 36902621 -35251261 + L2 LINE L2 3136 3194 -78 1077 128 0 0 chr20 36902861 36903010 -35250872 + AluSq/x SINE Alu 1 149 -163 195 42 0 0 chr20 36903012 36903036 -35250846 + (GGAGAA)n Simple_repeat Simple_repeat 2 25 0 314 277 84 0 chr20 36903037 36903156 -35250726 + L1M4 LINE L1 3073 3201 -2945 410 168 37 56 chr20 36903915 36904022 -35249860 + LTR16C LTR ERVL 387 491 0 298 353 10 10 chr20 36904307 36904409 -35249473 - L2 LINE L2 -44 3228 3127 260 296 0 28 chr20 36904458 36904529 -35249353 - L2 LINE L2 0 3272 3204 539 191 52 151 chr20 36904573 36904667 -35249215 - MIR SINE MIR -2 260 158 2368 107 0 0 chr20 36904667 36904989 -35248893 - AluSx SINE Alu 0 322 1 1689 113 0 0 chr20 36904989 36905202 -35248680 - AluJb SINE Alu -15 297 85 539 191 52 151 chr20 36905202 36905355 -35248527 - MIR SINE MIR -102 160 35 1449 207 128 71 chr20 36905768 36906323 -35247559 - MLT1G3 LTR MaLR 0 595 11 862 161 11 0 chr20 36906587 36906761 -35247121 + (TCCA)n Simple_repeat Simple_repeat 4 179 0 578 183 122 0 chr20 36906783 36906914 -35246968 + MIR SINE MIR 100 246 -16 2374 67 0 3 chr20 36906914 36907231 -35246651 + AluY SINE Alu 1 316 0 401 322 95 49 chr20 36907696 36908261 -35245621 - L2 LINE L2 -66 3206 2622 2270 120 7 0 chr20 36908531 36908840 -35245042 - AluSx SINE Alu -1 311 1 989 247 96 70 chr20 36908867 36909483 -35244399 - L1MEd LINE L1 -4869 1250 619 2530 239 68 22 chr20 36909520 36909739 -35244143 - L1ME3 LINE L1 -22 6140 5933 2007 153 3 7 chr20 36909739 36910040 -35243842 - AluJo SINE Alu -12 300 1 2530 239 68 22 chr20 36910040 36910560 -35243322 - L1ME3 LINE L1 -229 5933 5367 2026 128 17 10 chr20 36910715 36911012 -35242870 - AluJb SINE Alu -13 299 1 434 285 76 0 chr20 36911037 36911181 -35242701 + MER63A DNA MER1_type 56 210 0 492 244 81 48 chr20 36911182 36911391 -35242491 - MER46C DNA MER2_type -122 216 1 427 281 2 50 chr20 36911680 36911840 -35242042 + MIR SINE MIR 25 174 -34 915 262 106 54 chr20 36912360 36912561 -35241321 - L1ME3 LINE L1 -818 5328 5139 2161 130 3 3 chr20 36912561 36912861 -35241021 - AluJb SINE Alu -12 300 1 915 262 106 54 chr20 36912861 36913216 -35240666 - L1ME3 LINE L1 -1007 5139 4743 3949 168 19 30 chr20 36913217 36913986 -35239896 - L1MD2 LINE L1 0 6359 5599 2287 157 17 7 chr20 36913992 36914400 -35239482 - L1MC1 LINE L1 0 6333 5922 2386 127 11 14 chr20 36914400 36914770 -35239112 - Tigger2 DNA MER2_type 0 2718 2350 620 169 57 24 chr20 36914773 36914897 -35238985 - Tigger2 DNA MER2_type -2590 128 1 4451 116 5 3 chr20 36914897 36915595 -35238287 - L1MC1 LINE L1 -410 5923 5225 2072 170 56 0 chr20 36915595 36915972 -35237910 + Tigger3(Golem) DNA MER2_type 1 398 -2631 * 3498 116 5 84 chr20 36915970 36916036 -35237846 + Tigger3(Golem) DNA MER2_type 2425 2495 -533 2249 109 3 3 chr20 36916036 36916348 -35237534 - AluSx SINE Alu 0 312 1 3498 116 5 84 chr20 36916348 36916937 -35236945 + Tigger3(Golem) DNA MER2_type 2495 3028 0 3828 206 22 23 chr20 36916937 36917898 -35235984 - L1MC1 LINE L1 -920 5226 4267 1908 158 29 0 chr20 36917915 36918211 -35235671 - L1MD2 LINE L1 -639 5603 5282 207 0 0 0 chr20 36918211 36918234 -35235648 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1908 158 29 0 chr20 36918234 36918304 -35235578 - L1MD2 LINE L1 -960 5282 5216 2864 225 62 109 chr20 36918326 36918509 -35235373 - L1MD2 LINE L1 -1411 4735 4545 300 116 6 11 chr20 36918509 36918565 -35235317 - Alu SINE Alu -262 40 1 2864 225 62 109 chr20 36918565 36918758 -35235124 - L1MD2 LINE L1 -1601 4545 4345 2257 106 0 7 chr20 36918758 36919060 -35234822 + AluSx SINE Alu 1 300 -12 2864 225 62 109 chr20 36919060 36919563 -35234319 - L1MD2 LINE L1 -1801 4345 3820 1794 129 4 0 chr20 36919563 36919811 -35234071 - AluSx SINE Alu -63 249 1 2864 225 62 109 chr20 36919811 36919822 -35234060 - L1MD2 LINE L1 -2326 3820 3810 2084 127 0 10 chr20 36919822 36920122 -35233760 - AluSx SINE Alu -15 297 1 2864 225 62 109 chr20 36920122 36920133 -35233749 - L1MD2 LINE L1 -2336 3810 3800 1811 134 4 11 chr20 36920133 36920408 -35233474 - AluSx SINE Alu -13 299 27 2864 225 62 109 chr20 36920408 36920942 -35232940 - L1MD2 LINE L1 -2346 3800 3311 1672 138 24 0 chr20 36920945 36921199 -35232683 + AluSx SINE Alu 32 291 -21 429 174 54 0 chr20 37021358 37021450 -35132432 + MLT1A1 LTR MaLR 269 365 0 337 334 57 47 chr20 37021451 37021842 -35132040 + L2 LINE L2 2727 3114 -158 211 244 0 0 chr20 37021875 37021920 -35131962 + (TAA)n Simple_repeat Simple_repeat 3 47 0 276 338 103 14 chr20 37021920 37022065 -35131817 - L2 LINE L2 -10 3303 3146 293 188 159 0 chr20 37022080 37022149 -35131733 + MER116 DNA Mariner 1 80 0 180 337 69 30 chr20 37022230 37022331 -35131551 - L2 LINE L2 -253 3060 2956 214 378 67 38 chr20 37022504 37022742 -35131140 + L2 LINE L2 2810 3054 -218 378 59 0 0 chr20 37022893 37022944 -35130938 - L1M LINE L1 -927 5373 5323 335 215 201 9 chr20 37023374 37023516 -35130366 + MIR SINE MIR 21 184 -62 230 275 50 75 chr20 37023807 37023927 -35129955 - MIR3 SINE MIR -77 131 15 808 291 54 19 chr20 37024690 37025006 -35128876 - LTR16C LTR ERVL -10 481 155 338 253 55 11 chr20 37025135 37025226 -35128656 + L2 LINE L2 2976 3070 -202 807 244 47 19 chr20 37026164 37026377 -35127505 + MER58A DNA MER1_type 6 224 0 359 357 42 0 chr20 37026428 37026571 -35127311 + L2 LINE L2 3112 3260 -12 1019 202 81 4 chr20 37026944 37027202 -35126680 - LTR51 LTR ERV1 -14 657 380 654 154 9 0 chr20 37027302 37027412 -35126470 + AluJb SINE Alu 190 300 -12 1570 192 19 45 chr20 37028889 37028947 -35124935 + MLT1A1 LTR MaLR 1 59 -306 1565 143 4 22 chr20 37028947 37029219 -35124663 + AluSx SINE Alu 37 303 -9 1570 192 19 45 chr20 37029219 37029535 -35124347 + MLT1A1 LTR MaLR 59 365 0 3003 153 8 10 chr20 37030050 37030555 -35123327 - Tigger4(Zombi) DNA MER2_type -10 2721 2218 610 156 0 0 chr20 37030550 37030640 -35123242 - Tigger4(Zombi) DNA MER2_type -2640 91 2 * 750 177 15 0 chr20 37030804 37030934 -35122948 - FLAM_C SINE Alu -10 133 2 293 306 60 22 chr20 37031160 37031294 -35122588 + L2 LINE L2 3175 3313 0 672 94 0 0 chr20 37031309 37031405 -35122477 - AluSp/q SINE Alu -3 310 215 256 300 109 9 chr20 37032271 37032381 -35121501 + L2 LINE L2 2199 2319 -995 1052 133 0 6 chr20 37032981 37033139 -35120743 - AluSx SINE Alu -155 157 1 1666 161 7 17 chr20 37033142 37033440 -35120442 - AluJb SINE Alu -17 295 1 1914 119 3 11 chr20 37033708 37034038 -35119844 + AluSx SINE Alu 1 328 0 221 207 103 0 chr20 37034081 37034139 -35119743 - MIR SINE MIR -94 168 105 2136 110 0 0 chr20 37034205 37034504 -35119378 + AluSx SINE Alu 1 299 -13 188 295 181 29 chr20 37034640 37034745 -35119137 - L2 LINE L2 -211 3061 2941 1946 98 3 27 chr20 37034934 37035152 -35118730 - AluSq SINE Alu 0 346 137 1986 108 3 66 chr20 37035152 37035485 -35118397 - AluSx SINE Alu 0 312 1 1946 98 3 27 chr20 37035485 37035619 -35118263 - AluSq SINE Alu -209 137 1 1947 131 24 0 chr20 37036424 37036714 -35117168 - AluSq SINE Alu -16 297 1 2138 109 0 3 chr20 37036723 37037026 -35116856 - AluSq SINE Alu -11 302 1 384 318 155 8 chr20 37037074 37037319 -35116563 + L3 LINE CR1 916 1196 -381 183 316 238 18 chr20 37037413 37037581 -35116301 - MIR SINE MIR -1 261 57 611 249 223 0 chr20 37037726 37037923 -35115959 - MIR SINE MIR -16 246 6 1797 123 17 17 chr20 37037966 37038130 -35115752 - AluSx SINE Alu -13 299 133 2079 138 0 0 chr20 37038130 37038434 -35115448 - AluSx SINE Alu -8 304 1 1797 123 17 17 chr20 37038434 37038562 -35115320 - AluSx SINE Alu -178 134 7 239 143 24 0 chr20 37038581 37038623 -35115259 + MER116 DNA Mariner 38 80 0 2094 121 3 3 chr20 37038792 37039097 -35114785 - AluSq SINE Alu -8 305 1 297 0 0 0 chr20 37039192 37039225 -35114657 + (TG)n Simple_repeat Simple_repeat 2 34 0 1782 106 58 20 chr20 37039638 37039930 -35113952 + AluSq SINE Alu 1 303 -10 1282 175 4 32 chr20 37040157 37040409 -35113473 - AluJo SINE Alu -25 287 43 1449 136 21 0 chr20 37040417 37040660 -35113222 - L1MA5 LINE L1 -2 6298 6051 2299 85 0 3 chr20 37040670 37040975 -35112907 - AluY SINE Alu -5 306 3 2190 79 4 0 chr20 37040978 37041281 -35112601 - AluSx SINE Alu 0 308 5 1761 156 3 20 chr20 37041536 37041712 -35112170 - AluSx SINE Alu -2 310 140 2223 113 0 0 chr20 37041712 37042021 -35111861 - AluSq SINE Alu -4 309 1 1761 156 3 20 chr20 37042021 37042145 -35111737 - AluSx SINE Alu -172 140 15 222 37 0 0 chr20 37042167 37042194 -35111688 + (TTTTTA)n Simple_repeat Simple_repeat 2 28 0 1051 221 33 36 chr20 37043649 37043662 -35110220 + L1ME3A LINE L1 5862 5874 -296 1992 119 0 10 chr20 37043662 37043957 -35109925 + AluSx SINE Alu 1 292 -20 1051 221 33 36 chr20 37043957 37044246 -35109636 + L1ME3A LINE L1 5874 6163 -7 2020 112 35 0 chr20 37044256 37044543 -35109339 + AluSx SINE Alu 4 300 -12 191 449 36 0 chr20 37044718 37044885 -35108997 + L2 LINE L2 2565 2737 -577 181 359 29 19 chr20 37044915 37045018 -35108864 + MIR SINE MIR 21 124 -138 185 316 26 103 chr20 37045214 37045369 -35108513 + L2 LINE L2 3129 3271 -1 650 308 72 0 chr20 37045779 37045974 -35107908 + MIR SINE MIR 38 246 -16 185 326 22 34 chr20 37045990 37046079 -35107803 + MIR SINE MIR 18 105 -103 317 187 0 33 chr20 37046115 37046206 -35107676 + T-rich Low_complexity Low_complexity 3 90 0 1755 116 0 0 chr20 37047388 37047638 -35106244 - AluSx SINE Alu -5 307 58 306 294 31 94 chr20 37047762 37047878 -35106004 + MIR3 SINE MIR 11 133 -75 348 24 0 0 chr20 37047878 37047919 -35105963 + (TTCC)n Simple_repeat Simple_repeat 3 43 0 2258 106 3 0 chr20 37047923 37048235 -35105647 - AluSp SINE Alu 0 313 1 306 294 31 94 chr20 37048235 37048273 -35105609 + MIR3 SINE MIR 136 160 -48 209 217 31 147 chr20 37048416 37048443 -35105439 - L2 LINE L2 -235 3037 3008 1475 209 73 31 chr20 37048443 37048798 -35105084 + MLT1A2 LTR MaLR 1 370 -4 209 217 31 147 chr20 37048798 37048899 -35104983 - L2 LINE L2 -264 3008 2924 337 255 88 0 chr20 37049751 37049853 -35104029 - MLT1J LTR MaLR -249 262 152 451 236 45 9 chr20 37050665 37050775 -35103107 - MIR SINE MIR 0 262 149 554 233 136 10 chr20 37050788 37051091 -35102791 - L1 LINE L1 -3333 2813 2451 300 270 43 37 chr20 37051099 37051238 -35102644 - MIR SINE MIR -68 140 4 411 274 67 34 chr20 37051741 37051920 -35101962 + L2 LINE L2 2713 2897 -417 1597 226 53 10 chr20 37051921 37052319 -35101563 - L1M4 LINE L1 -1772 4374 3960 539 93 13 0 chr20 37052332 37052407 -35101475 + MADE1 DNA Mariner 1 76 -4 436 210 50 25 chr20 37052411 37052530 -35101352 + L2 LINE L2 3192 3313 0 457 253 36 47 chr20 37052958 37053108 -35100774 + MIR SINE MIR 42 195 -63 258 208 21 0 chr20 37053187 37053235 -35100647 + MER5B DNA MER1_type 13 61 -117 1338 144 55 23 chr20 37053237 37053493 -35100389 + L1MB5 LINE L1 5856 6119 -55 1798 243 34 40 chr20 37053513 37053734 -35100148 - L1ME1 LINE L1 -7 6159 5938 1752 159 34 0 chr20 37053734 37054029 -35099853 - AluSx SINE Alu -5 307 3 1798 243 34 40 chr20 37054029 37054147 -35099735 - L1ME1 LINE L1 -228 5938 5821 2344 66 0 7 chr20 37054147 37054452 -35099430 - AluY SINE Alu -8 303 1 1798 243 34 40 chr20 37054452 37054679 -35099203 - L1ME1 LINE L1 -345 5821 5596 281 337 48 59 chr20 37054692 37054766 -35099116 - L2 LINE L2 -1314 2000 1927 2110 122 0 0 chr20 37054766 37055069 -35098813 - AluSx SINE Alu -9 303 1 281 337 48 59 chr20 37055069 37055080 -35098802 - L2 LINE L2 -1387 1927 1917 2322 81 7 0 chr20 37055080 37055387 -35098495 - AluSg SINE Alu 0 310 2 281 337 48 59 chr20 37055387 37055573 -35098309 - L2 LINE L2 -1397 1917 1731 236 154 77 0 chr20 37055575 37055627 -35098255 + L1MB5 LINE L1 6113 6168 -6 2040 96 0 0 chr20 37055660 37055931 -35097951 + AluSx SINE Alu 1 271 -41 266 174 0 0 chr20 37055948 37055994 -35097888 + MER5B DNA MER1_type 133 178 0 528 206 118 7 chr20 37056010 37056146 -35097736 - MER58B DNA MER1_type -9 332 182 214 301 0 36 chr20 37056364 37056447 -35097435 + GA-rich Low_complexity Low_complexity 5 84 0 968 200 54 0 chr20 37057359 37057564 -35096318 - Tigger1 DNA MER2_type 0 2418 2203 782 227 29 5 chr20 37057565 37057772 -35096110 + L1 LINE L1 5088 5299 -847 1944 118 10 7 chr20 37057793 37058090 -35095792 + AluSx SINE Alu 1 298 -14 295 209 19 0 chr20 37058103 37058208 -35095674 + (TA)n Simple_repeat Simple_repeat 1 107 0 39 0 0 0 chr20 37058435 37058474 -35095408 + AT_rich Low_complexity Low_complexity 1 39 0 2112 104 0 0 chr20 37058474 37058793 -35095089 - AluSg SINE Alu 0 321 3 1654 164 19 16 chr20 37058963 37059274 -35094608 + AluJb SINE Alu 1 312 0 428 150 125 58 chr20 37059298 37059418 -35094464 - Tigger1 DNA MER2_type -2261 157 30 234 283 0 0 chr20 37059438 37059491 -35094391 + MIR SINE MIR 210 262 0 2142 101 7 7 chr20 37059572 37059878 -35094004 - AluSx SINE Alu -6 306 1 1646 184 0 7 chr20 37059880 37060174 -35093708 - AluJo SINE Alu -20 292 1 253 247 176 0 chr20 37060300 37060385 -35093497 + MIR SINE MIR 51 150 -58 377 341 8 0 chr20 37060961 37061093 -35092789 - MIR3 SINE MIR -24 184 52 2144 97 0 3 chr20 37062127 37062426 -35091456 - AluSp SINE Alu -14 299 2 1916 77 0 0 chr20 37062447 37062693 -35091189 - AluSg SINE Alu -9 301 56 1657 244 70 25 chr20 37062906 37063463 -35090419 - L1MD2 LINE L1 -3 6356 5775 1494 169 3 44 chr20 37064533 37064829 -35089053 + AluJo SINE Alu 23 306 -6 697 179 71 121 chr20 37065819 37065944 -35087938 - MER58A DNA MER1_type -2207 213 102 1651 193 3 0 chr20 37065944 37066245 -35087637 + AluJb SINE Alu 1 302 -10 697 179 71 121 chr20 37066245 37066343 -35087539 - MER58A DNA MER1_type -2318 102 1 866 144 0 22 chr20 37066429 37066568 -35087314 + AluJo SINE Alu 1 136 -176 515 115 0 124 chr20 37066819 37066854 -35087028 - L1MB4 LINE L1 -7 6173 6135 1609 196 0 13 chr20 37066854 37067166 -35086716 - AluJo SINE Alu -4 308 1 515 115 0 124 chr20 37067166 37067243 -35086639 - L1MB4 LINE L1 -45 6135 6075 2248 102 3 9 chr20 37067289 37067604 -35086278 - AluSp SINE Alu 0 313 1 249 33 0 0 chr20 37067690 37067720 -35086162 + (TTTTA)n Simple_repeat Simple_repeat 2 31 0 1780 135 0 28 chr20 37067723 37068011 -35085871 - AluSx SINE Alu -32 280 1 543 295 120 51 chr20 37068118 37068371 -35085511 - L1M4 LINE L1 -1262 4884 4650 1989 117 0 26 chr20 37068371 37068678 -35085204 - AluSx SINE Alu -13 299 1 543 295 120 51 chr20 37068678 37068903 -35084979 - L1M4 LINE L1 -1496 4650 4364 2319 90 0 0 chr20 37068951 37069252 -35084630 + AluY SINE Alu 1 301 -10 2630 23 0 7 chr20 37069341 37069649 -35084233 - AluY SINE Alu -5 306 1 356 187 70 87 chr20 37069682 37069808 -35084074 + MIR3 SINE MIR 66 201 -7 188 361 12 0 chr20 37070240 37070323 -35083559 + MIR SINE MIR 16 99 -163 691 220 44 22 chr20 37070436 37070618 -35083264 - MIR SINE MIR -29 233 48 525 173 87 0 chr20 37070620 37070724 -35083158 + MER3 DNA MER1_type 97 209 0 501 125 147 96 chr20 37071238 37071267 -35082615 - L1MB1 LINE L1 -1 6167 6141 2396 78 0 0 chr20 37071267 37071574 -35082308 + AluSq SINE Alu 1 307 -6 501 125 147 96 chr20 37071574 37071680 -35082202 - L1MB1 LINE L1 -27 6141 6025 691 124 19 0 chr20 37071681 37071786 -35082096 - U6 snRNA snRNA 0 107 1 272 224 41 31 chr20 37072517 37072615 -35081267 - MIR SINE MIR -66 142 44 291 278 69 56 chr20 37073373 37073517 -35080365 - L2 LINE L2 -52 3261 3116 1100 142 18 53 chr20 37073580 37073805 -35080077 + AluJb SINE Alu 89 305 -7 361 259 151 44 chr20 37073814 37074103 -35079779 - L2 LINE L2 -305 3008 2693 373 342 18 0 chr20 37074127 37074238 -35079644 + L2 LINE L2 3160 3272 0 347 229 8 59 chr20 37074725 37074781 -35079101 - L1ME1 LINE L1 -5 6161 6113 2234 82 7 0 chr20 37074781 37075073 -35078809 + AluSp SINE Alu 1 294 -19 347 229 8 59 chr20 37075073 37075134 -35078748 - L1ME1 LINE L1 -53 6113 6050 2042 128 0 3 chr20 37075181 37075479 -35078403 - AluSx SINE Alu -15 297 1 2145 156 27 32 chr20 37075489 37075539 -35078343 - L1MB2 LINE L1 -2 6169 6120 2380 80 0 0 chr20 37075539 37075841 -35078041 - AluSx SINE Alu -10 302 1 2145 156 27 32 chr20 37075841 37076200 -35077682 - L1MB2 LINE L1 -51 6120 5762 726 157 0 25 chr20 37076212 37076333 -35077549 - FAM SINE Alu -8 41 1 2060 118 0 13 chr20 37076342 37076510 -35077372 - AluSx SINE Alu -11 301 137 2276 77 0 3 chr20 37076510 37076807 -35077075 - AluY SINE Alu -15 296 1 2060 118 0 13 chr20 37076807 37076943 -35076939 - AluSx SINE Alu -175 137 1 307 290 24 92 chr20 37077401 37077608 -35076274 - MLT1J2 LTR MaLR 0 450 258 589 177 142 0 chr20 37078141 37078254 -35075628 - FLAM_C SINE Alu -3 130 2 346 106 0 0 chr20 37078330 37078377 -35075505 - FRAM/FAM SINE Alu -106 60 14 1849 159 0 3 chr20 37078475 37078777 -35075105 - AluSx SINE Alu -11 301 1 5135 110 62 38 chr20 37079963 37080296 -35073586 - MER4D LTR ERV1 0 903 580 2265 91 3 7 chr20 37080296 37080605 -35073277 + AluSp SINE Alu 2 309 -4 5135 110 62 38 chr20 37080605 37080962 -35072920 - MER4D LTR ERV1 -323 580 183 2155 64 7 3 chr20 37080962 37081282 -35072600 - AluY SINE Alu 0 321 1 5135 110 62 38 chr20 37081282 37081470 -35072412 - MER4D LTR ERV1 -720 183 1 552 264 108 30 chr20 37083045 37083276 -35070606 + MIR SINE MIR 9 257 -5 363 370 42 0 chr20 37083476 37083641 -35070241 - MIR SINE MIR -56 206 35 1364 146 138 4 chr20 37085128 37085396 -35068486 + AluJo SINE Alu 1 304 -8 2373 76 0 0 chr20 37085930 37086233 -35067649 - AluY SINE Alu -8 303 1 884 149 56 19 chr20 37086309 37086470 -35067412 + AluSg/x SINE Alu 132 298 -12 761 178 151 20 chr20 37086473 37086625 -35067257 + AluJo/FRAM SINE Alu 129 300 -12 2122 99 0 0 chr20 37086720 37087029 -35066853 - AluSg SINE Alu 0 309 1 1620 141 43 7 chr20 37087667 37087971 -35065911 - AluSq SINE Alu 0 314 1 253 193 125 34 chr20 37088162 37088250 -35065632 + HERV30 LTR ERV1 4872 4967 -3290 449 356 58 23 chr20 37088329 37088503 -35065379 - L2 LINE L2 -20 3252 3073 2004 112 0 14 chr20 37089002 37089297 -35064585 + AluSq SINE Alu 7 297 -16 1510 101 142 12 chr20 37089297 37089575 -35064307 + AluSg1 SINE Alu 1 310 0 2245 79 0 0 chr20 37089754 37090118 -35063764 - AluSc SINE Alu 0 309 1 969 192 71 0 chr20 37090190 37090372 -35063510 - MER3 DNA MER1_type -14 195 1 2210 112 0 0 chr20 37092881 37093194 -35060688 + AluSq SINE Alu 1 313 0 710 106 39 0 chr20 37093507 37093611 -35060271 + Tigger3(Golem) DNA MER2_type 1 108 -2921 * 910 139 110 25 chr20 37093602 37093847 -35060035 + Tigger3(Golem) DNA MER2_type 2277 2542 -487 293 233 14 14 chr20 37093820 37093893 -35059989 + AluSp SINE Alu 122 194 -109 * 2022 116 23 0 chr20 37093911 37094212 -35059670 + AluSx SINE Alu 1 308 -4 1290 154 42 0 chr20 37094271 37094485 -35059397 + AluJb SINE Alu 73 295 -17 1491 146 45 150 chr20 37094486 37094726 -35059156 + Tigger3(Golem) DNA MER2_type 2588 2751 -277 2077 119 0 0 chr20 37094726 37095021 -35058861 - AluSg SINE Alu -15 295 1 1491 146 45 150 chr20 37095021 37095273 -35058609 + Tigger3(Golem) DNA MER2_type 2751 3028 0 2094 106 3 0 chr20 37095290 37095583 -35058299 - AluSq SINE Alu -17 296 3 871 95 8 8 chr20 37095587 37095713 -35058169 - AluSq/x SINE Alu -181 132 7 1000 163 93 73 chr20 37098248 37098561 -35055321 + MER33 DNA MER1_type 2 320 -4 203 179 51 0 chr20 37098613 37098652 -35055230 + MIR SINE MIR 156 196 -66 370 298 18 0 chr20 37098697 37098811 -35055071 + MIR SINE MIR 91 206 -56 243 0 0 0 chr20 37098874 37098901 -35054981 + (TTTTTG)n Simple_repeat Simple_repeat 3 29 0 1571 91 0 5 chr20 37098911 37099131 -35054751 - AluSq SINE Alu -94 219 1 244 208 75 0 chr20 37099133 37099186 -35054696 - MIR SINE MIR -98 164 108 829 227 46 21 chr20 37099400 37099594 -35054288 + Charlie8 DNA MER1_type 78 276 -2141 278 308 129 36 chr20 37099837 37100149 -35053733 - L2 LINE L2 -184 3088 2752 281 143 16 79 chr20 37100266 37100329 -35053553 - MIR3 SINE MIR -6 202 144 1239 120 0 5 chr20 37100415 37100599 -35053283 + AluSx SINE Alu 1 183 -129 195 282 28 14 chr20 37100822 37100893 -35052989 - MIR SINE MIR -121 141 70 199 358 92 8 chr20 37100949 37101069 -35052813 + L2 LINE L2 3141 3270 -2 2108 110 0 3 chr20 37101261 37101553 -35052329 + AluSg SINE Alu 1 291 -19 3200 188 55 0 chr20 37101553 37101751 -35052131 - L1MD2 LINE L1 -11 6348 6162 189 0 0 0 chr20 37101751 37101772 -35052110 + (TG)n Simple_repeat Simple_repeat 2 22 0 3200 188 55 0 chr20 37101772 37102189 -35051693 - L1MD2 LINE L1 -197 6162 5699 191 333 0 23 chr20 37102239 37102326 -35051556 + MIR SINE MIR 151 235 -27 2456 106 14 25 chr20 37102440 37102808 -35051074 - THE1B LTR MaLR 0 364 1 415 221 58 0 chr20 37102840 37102926 -35050956 - MIR SINE MIR -123 139 49 301 296 11 0 chr20 37102942 37103030 -35050852 - L2 LINE L2 -557 2757 2669 266 254 30 0 chr20 37103315 37103382 -35050500 - MIR3 SINE MIR -51 157 89 351 194 0 4 chr20 37103394 37103455 -35050427 - L1M3 LINE L1 -627 5541 5483 1273 166 64 0 chr20 37103503 37103617 -35050265 - AluJo SINE Alu -62 250 145 201 39 0 0 chr20 37103617 37103643 -35050239 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1273 166 64 0 chr20 37103643 37103763 -35050119 - AluJo SINE Alu -167 145 1 1200 106 0 0 chr20 37103804 37103983 -35049899 + (TTCCC)n Simple_repeat Simple_repeat 2 180 0 234 91 0 0 chr20 37103983 37104016 -35049866 + (TCTCC)n Simple_repeat Simple_repeat 3 35 0 1894 110 4 4 chr20 37104068 37104341 -35049541 - AluSx SINE Alu -39 273 1 2396 63 0 7 chr20 37105368 37105670 -35048212 - AluY SINE Alu -11 300 1 295 301 140 11 chr20 37105759 37106057 -35047825 - L1P LINE L1 -2237 3909 3573 1663 184 13 3 chr20 37106172 37106481 -35047401 + AluJb SINE Alu 1 312 0 1707 88 13 0 chr20 37106523 37106776 -35047106 + AluSq SINE Alu 55 310 0 1624 103 4 4 chr20 37107289 37107522 -35046360 - AluSg/x SINE Alu -11 299 67 1984 99 0 18 chr20 37107522 37107805 -35046077 - AluY SINE Alu -33 278 1 2092 117 0 0 chr20 37107820 37108111 -35045771 - AluSc SINE Alu -18 291 1 183 333 67 0 chr20 37108162 37108222 -35045660 + L2 LINE L2 3142 3205 -67 1935 133 17 0 chr20 37108294 37108588 -35045294 - AluSx SINE Alu -13 299 1 321 250 40 0 chr20 37108614 37108690 -35045192 - MIR3 SINE MIR -48 160 82 2180 156 43 54 chr20 37109903 37110345 -35043537 + LTR36 LTR ERV1 1 437 -174 1610 101 0 9 chr20 37110350 37110578 -35043304 - AluSg/x SINE Alu -2 308 83 310 224 15 15 chr20 37110578 37110645 -35043237 + LTR36 LTR ERV1 545 611 0 180 0 0 0 chr20 37110655 37110675 -35043207 + (A)n Simple_repeat Simple_repeat 1 20 0 1930 139 3 0 chr20 37110681 37110975 -35042907 + AluSx SINE Alu 1 295 -17 840 205 116 37 chr20 37110985 37111200 -35042682 - MER66B LTR ERV1 -3 483 252 305 77 0 0 chr20 37111199 37111238 -35042644 + U2 snRNA snRNA 1 39 -149 * 469 193 68 85 chr20 37111242 37111418 -35042464 - MER66B LTR ERV1 -217 269 97 230 284 167 0 chr20 37111498 37111600 -35042282 + MIR SINE MIR 87 205 -57 925 246 62 25 chr20 37112222 37112466 -35041416 + MIR SINE MIR 10 262 0 348 349 56 16 chr20 37112774 37113026 -35040856 - L1MC/D LINE L1 -2008 5800 5539 804 151 8 0 chr20 37113123 37113249 -35040633 + AluJb SINE Alu 5 131 -181 363 261 33 49 chr20 37113299 37113483 -35040399 - L1MC/D LINE L1 -797 5349 5169 2001 136 0 3 chr20 37113495 37113803 -35040079 - AluSx SINE Alu 0 312 6 189 0 0 0 chr20 37113808 37113829 -35040053 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 1068 142 0 0 chr20 37113831 37113993 -35039889 - FRAM SINE Alu -17 159 1 2672 23 0 0 chr20 37114047 37114357 -35039525 - AluYa5 SINE Alu -1 310 1 557 280 63 51 chr20 37114409 37114555 -35039327 - L1MC4 LINE L1 -198 7844 7701 2038 96 0 0 chr20 37114555 37114826 -35039056 - AluSx SINE Alu -41 271 1 557 280 63 51 chr20 37114826 37115011 -35038871 - L1MC4 LINE L1 -341 7701 7509 1090 200 131 11 chr20 37115093 37115368 -35038514 - MLT1D LTR MaLR 0 505 198 525 203 110 0 chr20 37115457 37115575 -35038307 + MER63D DNA MER1_type 4 760 -76 195 125 188 21 chr20 37115634 37115682 -35038200 - L3 LINE CR1 -755 822 767 190 333 32 32 chr20 37116184 37116277 -35037605 + L2 LINE L2 1162 1254 -2060 183 265 0 20 chr20 37116280 37116329 -35037553 - L3 LINE CR1 -951 626 579 2372 61 3 0 chr20 37116523 37116819 -35037063 - AluY SINE Alu -14 297 1 238 217 0 0 chr20 37117301 37117347 -35036535 - Charlie8 DNA MER1_type -2346 71 26 417 264 97 28 chr20 37117872 37118075 -35035807 + MIR SINE MIR 27 256 -6 2740 13 0 0 chr20 37118078 37118411 -35035471 - AluY SINE Alu 0 333 1 2560 30 0 0 chr20 37118413 37118710 -35035172 - AluY SINE Alu -14 297 1 382 224 245 7 chr20 37119161 37119304 -35034578 + MIR3 SINE MIR 10 186 -22 819 150 0 0 chr20 37119589 37119709 -35034173 + FRAM SINE Alu 36 155 -21 21 57 0 0 chr20 37119830 37119865 -35034017 + AT_rich Low_complexity Low_complexity 1 35 0 362 200 0 0 chr20 37120409 37120469 -35033413 - FRAM/FAM SINE Alu -106 60 1 1480 184 3 31 chr20 37120498 37120786 -35033096 + AluJb SINE Alu 1 280 -32 870 129 32 0 chr20 37120829 37120984 -35032898 + L1MB8 LINE L1 6007 6166 -12 1671 160 0 57 chr20 37121285 37121455 -35032427 - AluJb SINE Alu -11 301 156 2274 80 0 0 chr20 37121455 37121754 -35032128 - AluY SINE Alu -12 299 1 1671 160 0 57 chr20 37121754 37121901 -35031981 - AluJb SINE Alu -156 156 2 190 250 62 12 chr20 37122196 37122276 -35031606 - L2 LINE L2 -410 2904 2821 548 191 25 94 chr20 37122448 37122542 -35031340 - MSTC LTR MaLR -238 158 80 891 144 0 0 chr20 37122542 37122667 -35031215 - FLAM_C SINE Alu -7 126 2 548 191 25 94 chr20 37122667 37122742 -35031140 - MSTC LTR MaLR -316 80 1 515 327 58 23 chr20 37122743 37123003 -35030879 - L2 LINE L2 -217 3096 2828 407 232 143 0 chr20 37123335 37123447 -35030435 + MIR SINE MIR 116 243 -19 504 292 0 26 chr20 37123927 37124081 -35029801 - MIR3 SINE MIR -1 207 58 252 336 70 7 chr20 37124276 37124419 -35029463 + MIR3 SINE MIR 43 194 -14 1545 195 3 13 chr20 37124537 37124850 -35029032 - AluJb SINE Alu -2 310 1 320 245 129 14 chr20 37125030 37125169 -35028713 - L2 LINE L2 -183 3089 2935 202 149 0 43 chr20 37125246 37125293 -35028589 + (GGA)n Simple_repeat Simple_repeat 1 45 0 322 290 130 30 chr20 37125557 37125757 -35028125 + L2 LINE L2 2893 3112 -160 1045 200 51 0 chr20 37125838 37126033 -35027849 - AluJb SINE Alu -17 295 91 493 154 0 0 chr20 37126033 37126111 -35027771 + AluJo SINE Alu 70 147 -165 193 161 0 0 chr20 37126115 37126146 -35027736 + L2 LINE L2 3008 3038 -275 828 128 8 0 chr20 37126177 37126294 -35027588 + AluJo/FLAM SINE Alu 1 118 -184 593 107 0 12 chr20 37126294 37126378 -35027504 - AluJb SINE Alu -228 84 2 423 298 53 8 chr20 37126620 37126751 -35027131 - MIR SINE MIR -113 149 13 266 293 172 9 chr20 37126793 37126909 -35026973 - L2 LINE L2 0 3313 3179 282 191 9 130 chr20 37127982 37128097 -35025785 + L2 LINE L2 2943 3043 -229 1707 152 3 25 chr20 37128121 37128404 -35025478 + AluJo SINE Alu 1 277 -35 972 192 12 0 chr20 37128404 37128576 -35025306 - AluJo SINE Alu -138 174 1 2035 127 0 7 chr20 37128598 37128898 -35024984 - AluSx SINE Alu -14 298 1 320 362 17 40 chr20 37128902 37129076 -35024806 + L2 LINE L2 3103 3272 0 597 333 27 0 chr20 37129474 37129660 -35024222 + MIR SINE MIR 51 241 -21 2002 105 0 7 chr20 37130966 37131280 -35022602 - AluSq SINE Alu 0 312 1 1847 144 0 27 chr20 37131282 37131581 -35022301 - AluSx SINE Alu -21 291 1 550 150 0 45 chr20 37131718 37131824 -35022058 - MER31A LTR ERV1 -37 444 340 364 371 77 15 chr20 37131824 37132096 -35021786 - L1MC/D LINE L1 -2213 5595 5307 865 223 57 14 chr20 37132117 37132328 -35021554 - MIR SINE MIR -12 250 31 256 340 42 91 chr20 37132397 37132662 -35021220 - L2 LINE L2 -13 3259 3008 642 185 85 0 chr20 37132700 37132830 -35021052 - MER63D DNA MER1_type -2 1058 918 690 234 0 0 chr20 37132836 37132964 -35020918 + FLAM_A SINE Alu 1 128 -5 267 31 0 0 chr20 37132969 37133001 -35020881 + (GA)n Simple_repeat Simple_repeat 1 32 0 259 133 17 17 chr20 37133022 37133082 -35020800 + GA-rich Low_complexity Low_complexity 1 60 0 2049 199 90 107 chr20 37133084 37133461 -35020421 - MER63D DNA MER1_type -139 922 540 2083 124 10 0 chr20 37133461 37133768 -35020114 + AluSx SINE Alu 3 312 0 2049 199 90 107 chr20 37133768 37133779 -35020103 - MER63D DNA MER1_type -521 540 530 2032 112 34 10 chr20 37133779 37134075 -35019807 + AluSx SINE Alu 1 303 -9 2049 199 90 107 chr20 37134075 37134487 -35019395 - MER63D DNA MER1_type -531 530 4 247 242 121 22 chr20 37134803 37134894 -35018988 + MIR SINE MIR 103 202 -60 909 179 5 65 chr20 37134923 37134981 -35018901 + MER5A DNA MER1_type 1 61 -128 2349 91 0 0 chr20 37134981 37135290 -35018592 - AluSq SINE Alu -3 310 2 909 179 5 65 chr20 37135290 37135432 -35018450 + MER5A DNA MER1_type 61 189 0 398 250 128 18 chr20 37135494 37135658 -35018224 - MER5A DNA MER1_type -1 188 7 385 238 127 16 chr20 37135703 37135829 -35018053 + Charlie8 DNA MER1_type 37 176 -2241 1244 237 4 0 chr20 37136278 37136556 -35017326 - L1ME3 LINE L1 -24 6138 5860 338 290 67 27 chr20 37136569 37136869 -35017013 + L1ME4a LINE L1 5771 6082 -39 278 227 0 0 chr20 37136860 37136926 -35016956 - L1MD3 LINE L1 -8 7987 7922 * 320 119 0 0 chr20 37136927 37136969 -35016913 - AluSp SINE Alu -130 173 132 1897 101 0 86 chr20 37136978 37137157 -35016725 - AluSp SINE Alu -6 307 114 211 28 56 0 chr20 37137157 37137193 -35016689 + (TTTTG)n Simple_repeat Simple_repeat 3 40 0 2108 81 4 0 chr20 37137193 37137464 -35016418 - AluSp SINE Alu -30 283 12 1897 101 0 86 chr20 37137464 37137619 -35016263 - AluSp SINE Alu -197 116 1 204 40 0 0 chr20 37137686 37137711 -35016171 + (A)n Simple_repeat Simple_repeat 1 25 0 2274 100 0 0 chr20 37137717 37138017 -35015865 + AluSx SINE Alu 1 300 -12 783 259 52 38 chr20 37138194 37138225 -35015657 - MIR SINE MIR -24 238 209 2072 106 7 0 chr20 37138225 37138517 -35015365 - AluSx SINE Alu -18 294 1 783 259 52 38 chr20 37138517 37138729 -35015153 - MIR SINE MIR -53 209 2 218 266 11 85 chr20 37138847 37138864 -35015018 - L2 LINE L2 -558 2756 2739 2329 91 0 0 chr20 37138864 37139173 -35014709 - AluSg SINE Alu -1 309 1 218 266 11 85 chr20 37139173 37139225 -35014657 - L2 LINE L2 -575 2739 2694 384 266 70 70 chr20 37139225 37139424 -35014458 + MIR SINE MIR 2 200 -62 397 190 70 30 chr20 37139424 37139458 -35014424 + L1MC4 LINE L1 6607 6638 -1404 549 0 0 0 chr20 37139458 37139519 -35014363 + (TCTA)n Simple_repeat Simple_repeat 2 62 0 397 190 70 30 chr20 37139519 37139584 -35014298 + L1MC4 LINE L1 6638 6710 -1332 2107 110 3 3 chr20 37140197 37140505 -35013377 - AluSx SINE Alu -4 308 1 211 164 33 16 chr20 37140531 37140592 -35013290 + CT-rich Low_complexity Low_complexity 1 62 0 465 274 114 6 chr20 37140823 37140998 -35012884 - MIR SINE MIR -43 219 26 440 262 140 114 chr20 37141187 37141308 -35012574 + L2 LINE L2 2913 3029 -284 2331 85 0 3 chr20 37141308 37141613 -35012269 - AluSx SINE Alu -5 307 4 440 262 140 114 chr20 37141613 37141737 -35012145 + L2 LINE L2 3029 3148 -165 2031 101 10 3 chr20 37141737 37142034 -35011848 + AluSx SINE Alu 6 304 -8 2293 93 3 3 chr20 37142034 37142344 -35011538 + AluSp SINE Alu 1 310 -3 440 262 140 114 chr20 37142344 37142481 -35011401 + L2 LINE L2 3147 3307 -6 2224 102 3 0 chr20 37142930 37143233 -35010649 + AluSx SINE Alu 5 308 -4 320 266 58 79 chr20 37143237 37143259 -35010623 - MIR SINE MIR -8 254 233 1824 146 7 7 chr20 37143259 37143553 -35010329 - AluSx SINE Alu -18 294 1 320 266 58 79 chr20 37143553 37143669 -35010213 - MIR SINE MIR -29 233 119 472 196 196 31 chr20 37143698 37143861 -35010021 + MIR SINE MIR 16 205 -57 1982 101 7 7 chr20 37143877 37144164 -35009718 - AluSc SINE Alu -20 289 3 729 153 17 0 chr20 37145034 37145152 -35008730 - AluJb SINE Alu -179 133 14 361 176 0 11 chr20 37145156 37145223 -35008659 - Alu SINE Alu -250 51 1 2188 118 0 3 chr20 37145247 37145552 -35008330 + AluSx SINE Alu 1 304 -8 2137 105 0 13 chr20 37145653 37145966 -35007916 - AluSc SINE Alu 0 309 1 1456 185 10 24 chr20 37146147 37146445 -35007437 + AluJo SINE Alu 1 294 -18 2192 119 3 0 chr20 37146458 37146770 -35007112 - AluSp SINE Alu 0 313 1 1000 156 0 17 chr20 37146770 37146943 -35006939 - FRAM SINE Alu -7 169 1 1617 129 16 63 chr20 37147186 37147489 -35006393 + AluJo SINE Alu 1 289 -23 2236 90 3 0 chr20 37147681 37147981 -35005901 - AluSg SINE Alu -9 301 1 1132 122 17 6 chr20 37148288 37148468 -35005414 + AluSq SINE Alu 131 312 -1 1810 155 3 0 chr20 37148507 37148804 -35005078 + AluSx SINE Alu 3 300 -12 620 252 0 0 chr20 37148875 37149006 -35004876 - FLAM_A SINE Alu -2 131 1 251 263 190 36 chr20 37149060 37149197 -35004685 + L2 LINE L2 3156 3313 0 459 248 109 30 chr20 37150083 37150248 -35003634 + MIR SINE MIR 31 207 -36 877 144 98 0 chr20 37150362 37150515 -35003367 - AluSg/x SINE Alu -13 297 130 2328 76 0 3 chr20 37150672 37150976 -35002906 + AluSx SINE Alu 1 303 -9 2265 110 0 0 chr20 37150988 37151298 -35002584 + AluSg SINE Alu 1 310 0 1996 122 0 7 chr20 37151344 37151638 -35002244 - AluSx SINE Alu -17 295 4 257 193 23 23 chr20 37151690 37151778 -35002104 + (TATATG)n Simple_repeat Simple_repeat 4 91 0 810 176 0 0 chr20 37151888 37152013 -35001869 - FRAM SINE Alu -29 147 23 352 191 0 0 chr20 37152022 37152085 -35001797 - L1ME LINE L1 -353 5809 5747 1590 135 61 34 chr20 37152086 37152246 -35001636 - AluSx SINE Alu -7 305 132 2263 72 0 10 chr20 37152246 37152552 -35001330 - AluY SINE Alu -8 303 1 1590 135 61 34 chr20 37152552 37152688 -35001194 - AluSx SINE Alu -180 132 1 33 25 0 0 chr20 37152690 37152730 -35001152 + AT_rich Low_complexity Low_complexity 1 40 0 246 132 0 0 chr20 37152820 37152858 -35001024 + MER112 DNA MER1_type 18 55 -205 1627 154 3 40 chr20 37152895 37153219 -35000663 - AluSx SINE Alu 0 312 1 716 207 83 7 chr20 37153221 37153366 -35000516 - AluJo SINE Alu -8 294 139 1602 75 205 4 chr20 37153367 37153649 -35000233 - AluY SINE Alu 0 301 1 812 161 0 23 chr20 37153663 37153793 -35000089 - AluJo SINE Alu -172 130 4 252 278 0 0 chr20 37153796 37153868 -35000014 + MER112 DNA MER1_type 74 145 -115 2150 100 0 19 chr20 37153868 37154178 -34999704 - AluSg SINE Alu -5 305 2 1610 189 14 3 chr20 37154179 37154476 -34999406 - AluJb SINE Alu -11 301 2 455 271 59 42 chr20 37154478 37154766 -34999116 - L1M4 LINE L1 -1131 5015 4723 2468 63 0 0 chr20 37154808 37155111 -34998771 - AluY SINE Alu -8 303 1 536 305 101 34 chr20 37155122 37155367 -34998515 - L1M4 LINE L1 -1500 4646 4376 2057 113 7 7 chr20 37155367 37155669 -34998213 - AluSx SINE Alu -10 302 1 536 305 101 34 chr20 37155669 37155722 -34998160 - L1M4 LINE L1 -1770 4376 4328 454 231 68 56 chr20 37155723 37155974 -34997908 + L1MC5 LINE L1 7526 7779 -182 635 241 26 119 chr20 37156156 37156575 -34997307 - L1M4 LINE L1 -1896 4250 3871 2306 77 3 0 chr20 37156578 37156888 -34996994 - AluY SINE Alu 0 311 1 1810 138 30 20 chr20 37156987 37157283 -34996599 + AluSg SINE Alu 1 299 -11 2131 121 0 0 chr20 37157313 37157610 -34996272 + AluSx SINE Alu 1 297 -15 1390 168 13 0 chr20 37157618 37157856 -34996026 + AluJo SINE Alu 1 241 -71 1993 162 11 39 chr20 37157856 37157937 -34995945 + LTR28 LTR ERV1 1 83 -553 2213 110 0 0 chr20 37157937 37158246 -34995636 - AluSq SINE Alu -4 309 1 1993 162 11 39 chr20 37158246 37158559 -34995323 + LTR28 LTR ERV1 83 382 -254 446 256 74 8 chr20 37158560 37158681 -34995201 - MIR SINE MIR -103 159 31 189 0 0 0 chr20 37158740 37158761 -34995121 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 180 135 0 0 chr20 37158978 37159015 -34994867 + (TG)n Simple_repeat Simple_repeat 2 38 0 2268 93 0 0 chr20 37159059 37159361 -34994521 - AluSc SINE Alu -7 302 1 1891 122 20 10 chr20 37159462 37159756 -34994126 - AluSq SINE Alu -16 297 1 2400 54 0 10 chr20 37159776 37160089 -34993793 - AluY SINE Alu -1 310 1 339 272 124 43 chr20 37160095 37160352 -34993530 - L1MC3 LINE L1 -32 7753 7476 717 54 0 0 chr20 37160357 37160450 -34993432 + AluY SINE Alu 204 296 -15 307 259 77 33 chr20 37160450 37160983 -34992899 - L1MC5 LINE L1 -481 7491 7064 2161 69 3 20 chr20 37160983 37161289 -34992593 - AluY SINE Alu -10 301 1 307 259 77 33 chr20 37161289 37161594 -34992288 - L1MC5 LINE L1 -908 7064 6774 1874 106 0 0 chr20 37161594 37161850 -34992032 + AluSg SINE Alu 1 256 -54 272 88 0 0 chr20 37161853 37161887 -34991995 + AluSp/q SINE Alu 225 258 -45 615 102 0 0 chr20 37161890 37161978 -34991904 + Alu SINE Alu 222 309 0 328 197 121 15 chr20 37161988 37162083 -34991799 + FRAM SINE Alu 74 175 0 382 279 93 16 chr20 37162106 37162235 -34991647 - L1MC4a LINE L1 -1105 6703 6565 2073 104 10 0 chr20 37162235 37162533 -34991349 - AluSx SINE Alu -11 301 1 242 196 0 0 chr20 37162560 37162606 -34991276 + Alu SINE Alu 256 301 -7 2522 18 0 0 chr20 37162608 37162930 -34990952 + AluYa5 SINE Alu 1 322 0 1907 134 0 3 chr20 37162930 37163252 -34990630 + AluSx SINE Alu 1 321 0 1266 178 89 41 chr20 37163312 37163476 -34990406 + AluSx SINE Alu 1 187 -125 2003 112 0 10 chr20 37163476 37163780 -34990102 - AluY SINE Alu -9 302 2 1266 178 89 41 chr20 37163780 37163907 -34989975 + AluSx SINE Alu 187 306 -6 241 35 0 0 chr20 37163936 37163965 -34989917 - L1MA9 LINE L1 -4 6308 6280 1886 137 0 3 chr20 37163978 37164271 -34989611 - AluSc SINE Alu -17 292 1 1967 113 7 23 chr20 37164459 37164768 -34989114 - AluSq SINE Alu -9 304 1 2093 109 3 3 chr20 37164804 37165106 -34988776 - AluSg SINE Alu -8 302 1 1960 124 0 0 chr20 37165201 37165503 -34988379 - AluSx SINE Alu 0 302 1 1476 181 7 20 chr20 37165529 37165833 -34988049 + AluJb SINE Alu 1 300 -12 741 218 0 0 chr20 37165842 37165975 -34987907 + FLAM_C SINE Alu 1 133 0 39 22 0 0 chr20 37165975 37166021 -34987861 + AT_rich Low_complexity Low_complexity 1 46 0 1842 114 44 11 chr20 37166021 37166322 -34987560 + AluSx SINE Alu 4 313 0 359 151 0 0 chr20 37166327 37166380 -34987502 + AluJb SINE Alu 181 233 -69 1127 147 6 0 chr20 37166380 37166557 -34987325 - AluJo SINE Alu -115 197 20 1784 151 14 3 chr20 37166569 37166853 -34987029 - AluJo SINE Alu -25 287 1 225 0 0 0 chr20 37166943 37166968 -34986914 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 2079 113 0 0 chr20 37166972 37167247 -34986635 - AluSx SINE Alu -37 275 1 261 0 0 0 chr20 37167665 37167694 -34986188 + (TG)n Simple_repeat Simple_repeat 2 30 0 626 284 60 5 chr20 37167887 37168105 -34985777 - MIR SINE MIR -2 260 31 906 272 37 50 chr20 37168306 37168462 -34985420 - L2 LINE L2 -52 3261 3104 2400 92 0 3 chr20 37168462 37168765 -34985117 - AluY SINE Alu -9 302 1 906 272 37 50 chr20 37168765 37169175 -34984707 - L2 LINE L2 -209 3104 2697 1964 111 61 4 chr20 37169183 37169462 -34984420 + AluSq SINE Alu 1 295 -18 1114 195 0 37 chr20 37169471 37169686 -34984196 + AluSg/x SINE Alu 85 291 -19 1325 271 45 9 chr20 37169690 37170136 -34983746 - L2 LINE L2 -623 2691 2230 1657 143 12 78 chr20 37170138 37170460 -34983422 + AluJo SINE Alu 1 301 -11 1343 142 30 60 chr20 37170503 37170568 -34983314 - L1MC1 LINE L1 -5 6328 6263 2023 130 3 40 chr20 37170568 37170890 -34982992 + AluJo SINE Alu 1 310 -2 1343 142 30 60 chr20 37170890 37171092 -34982790 - L1MC1 LINE L1 -70 6263 6069 266 197 66 0 chr20 37171199 37171260 -34982622 + MER46A DNA MER2_type 90 154 -82 2312 204 45 73 chr20 37171260 37171335 -34982547 - L1ME1 LINE L1 -37 6129 6053 1661 158 0 95 chr20 37171335 37171671 -34982211 + AluJo SINE Alu 1 304 -8 2312 204 45 73 chr20 37171671 37172255 -34981627 - L1ME1 LINE L1 -113 6053 5488 2719 165 93 48 chr20 37172279 37172343 -34981539 - L1MB7 LINE L1 0 6184 6124 2487 78 0 0 chr20 37172343 37172637 -34981245 + AluSc SINE Alu 1 294 -15 2719 165 93 48 chr20 37172637 37173196 -34980686 - L1MB7 LINE L1 -60 6124 5533 667 188 8 15 chr20 37173205 37173338 -34980544 - FLAM_A SINE Alu -1 132 1 315 231 55 0 chr20 37173352 37173443 -34980439 - L2 LINE L2 -1916 1398 1303 545 163 0 0 chr20 37173489 37173575 -34980307 - AluJ/FLAM SINE Alu -226 86 1 789 253 6 0 chr20 37173672 37173834 -34980048 - FAM SINE Alu -12 163 1 615 262 99 0 chr20 37173859 37174031 -34979851 - L1ME3 LINE L1 -2 6160 5972 2104 99 11 0 chr20 37174077 37174360 -34979522 - AluSq SINE Alu -27 286 1 586 226 77 0 chr20 37174364 37174532 -34979350 - L2 LINE L2 -2088 1226 1046 184 247 37 74 chr20 37174746 37174827 -34979055 - L2 LINE L2 -1 3271 3194 1142 103 0 0 chr20 37175144 37175289 -34978593 - AluSp SINE Alu -39 274 130 2518 63 3 0 chr20 37175519 37175819 -34978063 + AluY SINE Alu 1 301 -10 2301 81 3 3 chr20 37176028 37176340 -34977542 - AluSp SINE Alu 0 312 1 1221 219 165 6 chr20 37176888 37177221 -34976661 - MLT1F LTR MaLR -2 540 155 635 143 0 86 chr20 37177231 37177357 -34976525 - L1MB3 LINE L1 -9 6174 6060 2011 128 26 7 chr20 37177357 37177663 -34976219 - AluSx SINE Alu 0 312 1 635 143 0 86 chr20 37177663 37177676 -34976206 - L1MB3 LINE L1 -123 6060 6047 262 265 0 0 chr20 37177679 37177728 -34976154 - FLAM SINE Alu -17 116 68 710 157 17 0 chr20 37177729 37177844 -34976038 + AluJb SINE Alu 1 117 -195 520 158 0 0 chr20 37177842 37177918 -34975964 - AluJ/FLAM SINE Alu -235 77 2 * 2217 114 3 3 chr20 37177924 37178230 -34975652 - AluSx SINE Alu -6 306 1 2233 155 47 33 chr20 37178232 37178659 -34975223 - L1MB3 LINE L1 -127 6056 5624 1163 100 0 12 chr20 37178734 37178904 -34974978 - L1PA11 LINE L1 0 6174 6007 581 274 110 0 chr20 37178910 37179056 -34974826 - MLT1F LTR MaLR -390 177 16 300 111 0 0 chr20 37179138 37179183 -34974699 + (TCCC)n Simple_repeat Simple_repeat 4 48 0 1483 174 21 39 chr20 37179200 37179481 -34974401 - AluJo SINE Alu -36 276 1 1556 156 93 15 chr20 37179488 37179757 -34974125 - AluJo SINE Alu -22 290 1 187 281 0 31 chr20 37180172 37180236 -34973646 + L2 LINE L2 2976 3037 -235 224 246 169 21 chr20 37180454 37180596 -34973286 - L2 LINE L2 -117 3196 3034 2364 99 0 10 chr20 37180784 37181088 -34972794 + AluSg SINE Alu 1 301 -9 280 261 0 0 chr20 37181100 37181165 -34972717 + L2 LINE L2 3200 3264 -8 2318 92 0 0 chr20 37181794 37182103 -34971779 + AluSg SINE Alu 1 309 0 2407 86 7 0 chr20 37182264 37182567 -34971315 - AluSp SINE Alu -8 305 1 242 257 29 0 chr20 37182718 37182788 -34971094 + L2 LINE L2 3200 3271 -1 2344 86 0 3 chr20 37183011 37183303 -34970579 + AluSc SINE Alu 1 291 -18 386 344 62 42 chr20 37183399 37183666 -34970216 + L1M4 LINE L1 3604 3881 -2265 2206 108 3 3 chr20 37183666 37183977 -34969905 + AluSx SINE Alu 3 313 0 386 344 62 42 chr20 37183977 37184015 -34969867 + L1M4 LINE L1 3881 3917 -2229 1579 182 3 34 chr20 37184038 37184334 -34969548 - AluJo SINE Alu -25 287 1 649 224 29 17 chr20 37184335 37184509 -34969373 - L1MC4a LINE L1 -1859 5949 5774 21 53 0 35 chr20 37184551 37184580 -34969302 + AT_rich Low_complexity Low_complexity 1 29 -26 2416 54 7 10 chr20 37184580 37184878 -34969004 + AluY SINE Alu 2 298 -13 21 53 0 35 chr20 37184878 37184905 -34968977 + AT_rich Low_complexity Low_complexity 29 55 0 1885 150 16 22 chr20 37184905 37185218 -34968664 + AluJb SINE Alu 1 311 -1 22 35 0 0 chr20 37185267 37185296 -34968586 + AT_rich Low_complexity Low_complexity 1 29 0 436 175 0 0 chr20 37185586 37185666 -34968216 - MER116 DNA Mariner 0 80 1 1960 135 3 20 chr20 37186723 37187027 -34966855 + AluJo SINE Alu 1 299 -13 2481 75 0 3 chr20 37187125 37187432 -34966450 + AluY SINE Alu 1 306 -5 233 229 0 0 chr20 37187938 37187986 -34965896 - L2 LINE L2 -4 3309 3262 250 258 77 77 chr20 37188420 37188629 -34965253 - LTR67 LTR ERVL -29 528 320 213 39 0 0 chr20 37188668 37188694 -34965188 + (CAG)n Simple_repeat Simple_repeat 1 26 0 189 185 148 0 chr20 37188695 37188749 -34965133 + MER5A DNA MER1_type 48 109 -80 229 249 91 86 chr20 37188992 37189064 -34964818 - L1MC4a LINE L1 -1814 5994 5924 1536 178 7 51 chr20 37189064 37189357 -34964525 + AluJb SINE Alu 1 280 -32 216 0 0 0 chr20 37189357 37189381 -34964501 + (CAAT)n Simple_repeat Simple_repeat 4 27 0 229 249 91 86 chr20 37189381 37189504 -34964378 - L1MC4a LINE L1 -1883 5925 5797 2300 113 0 0 chr20 37189506 37189815 -34964067 + AluSc SINE Alu 1 309 0 203 273 101 71 chr20 37189961 37190080 -34963802 - MIR SINE MIR -44 218 88 2093 94 25 4 chr20 37190080 37190378 -34963504 + AluSx SINE Alu 1 304 0 203 273 101 71 chr20 37190378 37190455 -34963427 - MIR SINE MIR -174 88 15 1609 97 31 0 chr20 37190924 37191150 -34962732 - AluSg/x SINE Alu -11 299 67 230 180 0 40 chr20 37191153 37191203 -34962679 + L2 LINE L2 3234 3281 -32 2260 105 0 13 chr20 37191254 37191560 -34962322 + AluSg SINE Alu 1 302 -8 1764 154 22 4 chr20 37191607 37191880 -34962002 - AluJb SINE Alu -20 292 15 538 136 12 0 chr20 37192037 37192118 -34961764 - MER51A LTR ERV1 -83 551 470 2129 120 0 0 chr20 37192119 37192418 -34961464 - AluY SINE Alu -12 299 1 186 71 0 0 chr20 37192420 37192448 -34961434 + (T)n Simple_repeat Simple_repeat 1 28 0 432 0 0 0 chr20 37192560 37192608 -34961274 + (CA)n Simple_repeat Simple_repeat 1 48 0 512 252 29 80 chr20 37192905 37193219 -34960663 - L1ME1 LINE L1 -31 6135 5838 792 69 0 52 chr20 37193264 37193380 -34960502 - L1PA3 LINE L1 0 6155 6046 1436 168 12 81 chr20 37193380 37193701 -34960181 - AluJo SINE Alu -13 299 1 1707 170 51 0 chr20 37193787 37194081 -34959801 - AluSx SINE Alu -3 309 1 2038 103 57 0 chr20 37194199 37194480 -34959402 - AluSx SINE Alu -15 297 1 1836 174 135 12 chr20 37194794 37195201 -34958681 - MSTB2 LTR MaLR 0 457 1 1989 125 52 0 chr20 37196279 37196567 -34957315 - AluSg SINE Alu -7 303 1 1752 177 13 13 chr20 37196593 37196892 -34956990 + AluJo SINE Alu 1 299 -13 1329 121 0 11 chr20 37198313 37198503 -34955379 - AluSx SINE Alu 0 312 125 261 0 0 0 chr20 37198602 37198631 -34955251 + (T)n Simple_repeat Simple_repeat 1 29 0 688 141 0 0 chr20 37198974 37199073 -34954809 - AluSx SINE Alu -176 136 38 2199 114 3 7 chr20 37199650 37199948 -34953934 + AluSx SINE Alu 1 297 -15 393 278 65 51 chr20 37199990 37200206 -34953676 - MIR SINE MIR -16 246 28 2329 95 0 0 chr20 37200619 37200913 -34952969 - AluSg SINE Alu -16 294 1 2451 78 7 0 chr20 37200959 37201267 -34952615 + AluSx SINE Alu 3 312 0 772 125 0 0 chr20 37201269 37201381 -34952501 - HY1 scRNA scRNA 0 112 1 1410 174 3 79 chr20 37201479 37201766 -34952116 + AluJo SINE Alu 2 264 -48 2381 99 3 0 chr20 37201766 37202070 -34951812 - AluSx SINE Alu -7 305 1 1410 174 3 79 chr20 37202070 37202098 -34951784 + AluJo SINE Alu 264 293 -19 30 0 0 0 chr20 37203491 37203521 -34950361 + AT_rich Low_complexity Low_complexity 1 30 0 2492 97 37 20 chr20 37203521 37203683 -34950199 - L1MA3 LINE L1 0 6305 6147 2158 128 0 16 chr20 37203683 37203995 -34949887 - AluSx SINE Alu -5 307 1 2492 97 37 20 chr20 37203995 37204233 -34949649 - L1MA3 LINE L1 -158 6147 5898 860 199 27 11 chr20 37204345 37204531 -34949351 - MER5A DNA MER1_type 0 189 1 2206 82 3 20 chr20 37205585 37205888 -34947994 - AluSg SINE Alu 0 310 13 2254 115 0 7 chr20 37206585 37206889 -34946993 - AluSx SINE Alu -10 302 1 2012 129 10 10 chr20 37207558 37207861 -34946021 - AluSx SINE Alu -9 303 1 1947 136 14 0 chr20 37207947 37208233 -34945649 - AluSx SINE Alu -22 290 1 2239 121 0 7 chr20 37208254 37208559 -34945323 - AluSx SINE Alu -9 303 1 460 240 111 80 chr20 37209253 37209777 -34944105 - L1ME4a LINE L1 -21 6100 5514 203 283 124 18 chr20 37209912 37210025 -34943857 - L2 LINE L2 -35 3278 3154 1921 156 3 19 chr20 37210462 37210770 -34943112 + AluJo SINE Alu 1 303 -9 336 264 40 24 chr20 37212157 37212282 -34941600 - Charlie2a DNA MER1_type 0 2862 2736 698 200 0 0 chr20 37212306 37212421 -34941461 + FLAM_A SINE Alu 1 115 -18 405 0 0 0 chr20 37212424 37212469 -34941413 + (CA)n Simple_repeat Simple_repeat 2 46 0 402 236 132 22 chr20 37212470 37212652 -34941230 - Charlie2a DNA MER1_type -1213 1649 1448 846 165 47 12 chr20 37212764 37212934 -34940948 + MER33 DNA MER1_type 1 170 -88 1825 102 0 28 chr20 37212940 37213195 -34940687 + AluSq SINE Alu 21 268 -45 1302 156 5 14 chr20 37213232 37213443 -34940439 + AluJo SINE Alu 1 209 -103 24 0 0 0 chr20 37213443 37213467 -34940415 + AT_rich Low_complexity Low_complexity 1 24 0 1908 153 20 3 chr20 37213514 37213815 -34940067 - AluJb SINE Alu -5 307 2 514 77 0 0 chr20 37213878 37213943 -34939939 + AluSq/x SINE Alu 71 135 -178 2126 119 0 3 chr20 37213943 37214259 -34939623 + AluSx SINE Alu 1 315 0 604 187 205 6 chr20 37214320 37214486 -34939396 + MER105 DNA DNA 5 203 -1 598 220 45 141 chr20 37214490 37214781 -34939101 - Charlie2 DNA MER1_type -2584 278 16 209 333 51 22 chr20 37214933 37215071 -34938811 + MER5A DNA MER1_type 47 188 -1 2178 122 0 3 chr20 37215281 37215577 -34938305 - AluSx SINE Alu -17 295 1 183 209 19 38 chr20 37215777 37215882 -34938000 + CT-rich Low_complexity Low_complexity 5 107 0 2326 93 3 0 chr20 37216028 37216318 -34937564 + AluSp SINE Alu 1 291 -22 1946 117 14 31 chr20 37216336 37216626 -34937256 + AluSx SINE Alu 2 286 -26 264 59 0 0 chr20 37216626 37216660 -34937222 + (CAAG)n Simple_repeat Simple_repeat 2 35 0 2109 122 0 0 chr20 37216825 37217119 -34936763 + AluSx SINE Alu 1 294 -18 25 51 0 0 chr20 37217360 37217399 -34936483 + AT_rich Low_complexity Low_complexity 1 39 0 2151 122 0 40 chr20 37217894 37218039 -34935843 + AluSx SINE Alu 1 150 -162 2562 74 0 0 chr20 37218039 37218348 -34935534 + AluY SINE Alu 1 309 -2 2151 122 0 40 chr20 37218348 37218523 -34935359 + AluSx SINE Alu 150 308 -4 24 0 0 0 chr20 37218574 37218598 -34935284 + AT_rich Low_complexity Low_complexity 1 24 0 2047 210 107 61 chr20 37219954 37220257 -34933625 - L1MDa LINE L1 -2793 3747 3459 2222 112 0 0 chr20 37220257 37220553 -34933329 + AluSx SINE Alu 1 296 -16 2047 210 107 61 chr20 37220553 37221122 -34932760 - L1MDa LINE L1 -3081 3459 2835 2116 132 3 0 chr20 37221122 37221417 -34932465 - AluSx SINE Alu -16 296 1 526 243 148 67 chr20 37221417 37221475 -34932407 - L1MDa LINE L1 -4001 2539 2487 1710 97 0 4 chr20 37221475 37221703 -34932179 - AluSg/x SINE Alu -2 310 84 526 243 148 67 chr20 37221703 37221984 -34931898 - L1MDa LINE L1 -4053 2487 2230 2133 117 3 29 chr20 37221984 37222292 -34931590 - AluSq SINE Alu -13 300 1 526 243 148 67 chr20 37222292 37222496 -34931386 - L1MDa LINE L1 -4310 2230 1945 1156 151 0 0 chr20 37222506 37222672 -34931210 - AluJb SINE Alu -18 294 129 1373 165 15 53 chr20 37222846 37223112 -34930770 + AluJb SINE Alu 27 282 -30 2331 110 0 0 chr20 37223132 37223433 -34930449 + AluSx SINE Alu 1 301 -11 2356 86 3 7 chr20 37224305 37224606 -34929276 + AluSx SINE Alu 1 300 -12 2115 87 35 45 chr20 37224705 37224841 -34929041 + AluSq SINE Alu 1 137 -176 2614 56 0 3 chr20 37224841 37225147 -34928735 + AluY SINE Alu 1 305 -6 2115 87 35 45 chr20 37225147 37225320 -34928562 + AluSq SINE Alu 137 307 -6 935 104 15 0 chr20 37225456 37225591 -34928291 - AluSg/x SINE Alu 0 312 176 661 163 8 8 chr20 37225593 37225716 -34928166 - FRAM SINE Alu -12 164 42 380 89 0 0 chr20 37227758 37227814 -34926068 + AluJb SINE Alu 78 133 -169 809 204 28 22 chr20 37227853 37228034 -34925848 + AluJb SINE Alu 131 312 0 426 186 87 116 chr20 37228547 37228699 -34925183 - L1MD3 LINE L1 0 8042 7887 2164 124 3 7 chr20 37228699 37228997 -34924885 + AluSx SINE Alu 5 301 -11 426 186 87 116 chr20 37228997 37229065 -34924817 - L1MD3 LINE L1 -155 7887 7839 2400 87 0 10 chr20 37229065 37229374 -34924508 - AluSx SINE Alu -6 306 1 426 186 87 116 chr20 37229374 37229395 -34924487 - L1MD3 LINE L1 -203 7839 7819 1384 105 0 0 chr20 37229406 37229587 -34924295 + AluSg/x SINE Alu 132 312 0 417 100 0 0 chr20 37229594 37229654 -34924228 - L1MC4 LINE L1 -211 7831 7772 190 206 237 0 chr20 37229864 37229967 -34923915 + L2 LINE L2 2783 2907 -365 1603 175 46 0 chr20 37230452 37230732 -34923150 - AluJo SINE Alu -19 293 1 2211 131 0 3 chr20 37230761 37231073 -34922809 + AluSx SINE Alu 1 311 -1 1043 169 0 6 chr20 37231079 37231251 -34922631 + FRAM SINE Alu 1 166 -10 372 206 11 22 chr20 37231258 37231350 -34922532 - L1ME LINE L1 -314 5807 5717 1794 167 3 14 chr20 37231464 37231758 -34922124 - AluJb SINE Alu -21 291 1 1288 173 132 103 chr20 37232711 37232844 -34921038 - L1MC4 LINE L1 -11 8031 7903 2235 121 0 10 chr20 37232844 37233150 -34920732 - AluSx SINE Alu -9 303 1 1288 173 132 103 chr20 37233150 37233457 -34920425 - L1MC4 LINE L1 -139 7903 7589 306 50 0 0 chr20 37233484 37233524 -34920358 + (T)n Simple_repeat Simple_repeat 1 40 0 2527 182 59 22 chr20 37233531 37234123 -34919759 - L1MC4 LINE L1 -440 7602 6989 1988 112 52 7 chr20 37234156 37234442 -34919440 - AluSx SINE Alu -13 299 1 1641 227 141 70 chr20 37235260 37235675 -34918207 - MLT1E LTR MaLR -8 585 120 834 131 14 21 chr20 37235675 37235820 -34918062 + U4 snRNA snRNA 1 144 -1 1641 227 141 70 chr20 37235820 37235950 -34917932 - MLT1E LTR MaLR -473 120 1 2400 86 3 3 chr20 37235994 37236297 -34917585 - AluSp SINE Alu -10 303 1 762 120 0 17 chr20 37236655 37236772 -34917110 + FLAM_C SINE Alu 3 117 -16 28 0 0 0 chr20 37236772 37236800 -34917082 + AT_rich Low_complexity Low_complexity 1 28 0 2211 128 3 0 chr20 37237022 37237328 -34916554 - AluSg SINE Alu -1 309 3 2175 138 0 3 chr20 37237368 37237679 -34916203 - AluSx SINE Alu -2 310 1 30 0 0 0 chr20 37237727 37237757 -34916125 + AT_rich Low_complexity Low_complexity 1 30 0 1123 161 6 11 chr20 37237757 37237937 -34915945 - AluSg/x SINE Alu -25 285 107 2248 52 45 7 chr20 37238558 37238844 -34915038 - AluY SINE Alu -14 297 1 484 210 266 0 chr20 37239613 37239756 -34914126 - MER5A DNA MER1_type 0 189 9 2283 107 3 0 chr20 37239948 37240248 -34913634 + AluSg SINE Alu 1 301 -9 1716 176 14 0 chr20 37240304 37240582 -34913300 - AluJb SINE Alu -30 282 1 412 217 100 0 chr20 37241234 37241354 -34912528 + MIR3 SINE MIR 52 183 -25 1367 142 81 38 chr20 37242011 37242272 -34911610 + AluJo SINE Alu 5 276 -36 1357 165 0 13 chr20 37242544 37242774 -34911108 - AluSg/x SINE Alu -1 311 85 2272 100 0 10 chr20 37242944 37243245 -34910637 + AluSq SINE Alu 4 301 -12 2110 136 0 3 chr20 37243500 37243808 -34910074 - AluSg SINE Alu -3 307 1 2276 99 13 3 chr20 37243991 37244294 -34909588 - AluSx SINE Alu -6 306 1 321 267 117 8 chr20 37244446 37244566 -34909316 - MIR SINE MIR -111 151 19 2431 91 0 3 chr20 37244691 37244999 -34908883 - AluY SINE Alu -4 307 1 2339 105 0 6 chr20 37245008 37245322 -34908560 - AluSx SINE Alu 0 312 1 2139 108 14 0 chr20 37245323 37245609 -34908273 - AluSx SINE Alu -8 304 15 1898 128 75 0 chr20 37245613 37245894 -34907988 - AluSg SINE Alu -8 302 1 976 181 46 42 chr20 37246003 37246136 -34907746 - L1MB3 LINE L1 -9 6174 6038 2068 134 0 10 chr20 37246136 37246435 -34907447 + AluSx SINE Alu 1 296 -16 976 181 46 42 chr20 37246435 37246539 -34907343 - L1MB3 LINE L1 -145 6038 5936 1988 138 26 7 chr20 37246747 37247052 -34906830 - AluSx SINE Alu -1 311 1 190 108 54 0 chr20 37247243 37247280 -34906602 + MIR SINE MIR 95 133 -129 1827 167 6 22 chr20 37247385 37247702 -34906180 + AluJo SINE Alu 1 312 0 1625 164 0 36 chr20 37247892 37248173 -34905709 - AluJo SINE Alu -15 297 27 2418 71 0 10 chr20 37248173 37248468 -34905414 + AluSp SINE Alu 1 292 -21 258 146 24 0 chr20 37248473 37248514 -34905368 - AluJo SINE Alu -266 42 1 2347 92 0 0 chr20 37248531 37248825 -34905057 - AluSg SINE Alu -16 294 1 2177 139 0 0 chr20 37248907 37249210 -34904672 - AluSx SINE Alu -9 303 1 234 260 38 29 chr20 37249225 37249242 -34904640 + MIR SINE MIR 2 17 -191 1764 169 3 3 chr20 37249242 37249537 -34904345 + AluJb SINE Alu 1 295 -17 234 260 38 29 chr20 37249537 37249624 -34904258 + MIR SINE MIR 17 106 -102 2231 115 0 0 chr20 37249788 37250093 -34903789 - AluSq SINE Alu -8 305 1 2032 89 107 4 chr20 37250254 37250535 -34903347 + AluSg SINE Alu 1 310 0 2200 88 0 14 chr20 37250580 37250884 -34902998 + AluSc SINE Alu 1 300 0 2018 120 3 3 chr20 37250895 37251178 -34902704 + AluSc SINE Alu 1 283 -26 1832 139 0 93 chr20 37251462 37251632 -34902250 - AluJo SINE Alu -11 301 117 342 0 0 0 chr20 37251632 37251670 -34902212 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 2169 103 4 0 chr20 37251671 37251952 -34901930 - AluSp SINE Alu -31 282 1 1958 110 55 0 chr20 37251954 37252244 -34901638 - AluSg SINE Alu -4 306 1 2089 113 10 7 chr20 37252246 37252547 -34901335 - AluSx SINE Alu -4 308 7 1832 139 0 93 chr20 37252547 37252558 -34901324 - AluJo SINE Alu -197 115 105 2448 60 0 0 chr20 37252558 37252869 -34901013 - AluY SINE Alu 0 311 1 1832 139 0 93 chr20 37252869 37253009 -34900873 - AluJo SINE Alu -207 105 1 2074 118 10 0 chr20 37253060 37253348 -34900534 - AluSx SINE Alu -21 291 1 216 150 133 50 chr20 37253356 37253416 -34900466 - L2 LINE L2 -6 3266 3202 2031 101 16 57 chr20 37253607 37253923 -34899959 + AluSx SINE Alu 1 303 -9 2171 121 0 3 chr20 37254012 37254319 -34899563 - AluSg SINE Alu -4 306 1 1910 135 0 7 chr20 37254337 37254619 -34899263 - AluSq SINE Alu -22 291 12 1939 131 30 7 chr20 37254712 37255017 -34898865 - AluSx SINE Alu 0 312 1 1613 161 0 60 chr20 37255165 37255301 -34898581 + AluJo SINE Alu 1 111 -201 2271 100 3 0 chr20 37255301 37255602 -34898280 + AluY SINE Alu 1 302 -9 1613 161 0 60 chr20 37255602 37255763 -34898119 + AluJo SINE Alu 111 280 -32 2057 120 20 20 chr20 37255763 37256064 -34897818 - AluSq SINE Alu -12 301 1 2256 64 0 0 chr20 37256260 37256527 -34897355 + AluY SINE Alu 34 300 -11 2272 112 0 0 chr20 37257379 37257675 -34896207 + AluSc SINE Alu 1 296 -13 2067 103 0 85 chr20 37258306 37258444 -34895438 + AluSq SINE Alu 1 149 -164 2297 88 3 0 chr20 37258444 37258729 -34895153 + AluSp SINE Alu 1 286 -27 180 0 0 0 chr20 37258735 37258755 -34895127 + (TAAA)n Simple_repeat Simple_repeat 1 20 0 2067 103 0 85 chr20 37258755 37258940 -34894942 + AluSq SINE Alu 154 303 -10 518 319 49 0 chr20 37258992 37259177 -34894705 - MIR SINE MIR -49 213 20 235 213 280 0 chr20 37259809 37259884 -34893998 - MIR SINE MIR -162 100 5 268 237 10 93 chr20 37259894 37259991 -34893891 - MIR SINE MIR -100 108 20 412 299 213 5 chr20 37261548 37261759 -34892123 + MIR SINE MIR 8 262 0 226 283 0 0 chr20 37261924 37261970 -34891912 - L2 LINE L2 -18 3254 3209 1663 124 7 51 chr20 37262946 37263091 -34890791 - AluSg SINE Alu -48 262 133 2203 102 0 7 chr20 37263091 37263386 -34890496 + AluSg SINE Alu 1 293 -17 1663 124 7 51 chr20 37263386 37263514 -34890368 - AluSg SINE Alu -177 133 1 1698 137 100 0 chr20 37264273 37264543 -34889339 + AluSx SINE Alu 1 297 -15 25 0 0 0 chr20 37264849 37264874 -34889008 + AT_rich Low_complexity Low_complexity 1 25 0 21 57 0 0 chr20 37267018 37267053 -34886829 + AT_rich Low_complexity Low_complexity 1 35 0 1822 150 39 0 chr20 37267135 37267421 -34886461 + AluSq SINE Alu 1 297 -16 979 118 0 15 chr20 37267539 37267675 -34886207 + AluSq/x SINE Alu 1 134 -179 1605 160 49 31 chr20 37267676 37267964 -34885918 + AluSx SINE Alu 1 293 -19 2484 87 3 0 chr20 37268365 37268677 -34885205 + AluSp SINE Alu 1 313 0 26 30 0 0 chr20 37269793 37269826 -34884056 + AT_rich Low_complexity Low_complexity 1 33 0 770 178 302 0 chr20 37273483 37273652 -34880230 + AluSg SINE Alu 1 220 -90 1726 126 134 11 chr20 37273806 37274075 -34879807 + AluSx SINE Alu 1 302 0 21 57 0 0 chr20 37274302 37274337 -34879545 + AT_rich Low_complexity Low_complexity 1 35 0 837 194 5 164 chr20 37274821 37274937 -34878945 + AluSp SINE Alu 1 134 -179 2061 105 3 49 chr20 37274937 37275243 -34878639 - AluSp SINE Alu -20 293 2 837 194 5 164 chr20 37275243 37275264 -34878618 + AluSp SINE Alu 134 157 -156 180 0 0 0 chr20 37275264 37275284 -34878598 + (CCAA)n Simple_repeat Simple_repeat 1 20 0 837 194 5 164 chr20 37275284 37275512 -34878370 + AluSp SINE Alu 157 309 -4 28 61 0 0 chr20 37276045 37276094 -34877788 + AT_rich Low_complexity Low_complexity 1 49 0 495 157 0 0 chr20 37276289 37276359 -34877523 + AluS SINE Alu 2 71 -242 1541 148 12 4 chr20 37276852 37277095 -34876787 - AluSq SINE Alu -68 245 1 1032 219 146 54 chr20 37277320 37277689 -34876193 + MSTB LTR MaLR 1 403 -23 2116 118 0 26 chr20 37277689 37277993 -34875889 - AluSx SINE Alu -16 296 1 350 181 96 0 chr20 37278094 37278177 -34875705 + U13 snRNA snRNA 5 95 -9 565 238 40 8 chr20 37278201 37278327 -34875555 + AluJo SINE Alu 1 130 -172 2019 154 0 0 chr20 37278617 37278929 -34874953 + AluSx SINE Alu 1 312 0 300 200 35 59 chr20 37279179 37279264 -34874618 + L1MB8 LINE L1 6058 6140 -38 577 219 60 20 chr20 37279327 37279478 -34874404 + AluJo SINE Alu 136 292 -20 2409 68 0 3 chr20 37279483 37279778 -34874104 - AluY SINE Alu -17 294 1 183 42 0 0 chr20 37279887 37279911 -34873971 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1292 172 93 7 chr20 37280024 37280149 -34873733 + AluSx SINE Alu 1 114 -198 2295 101 3 7 chr20 37280149 37280456 -34873426 + AluSp SINE Alu 1 306 -7 1292 172 93 7 chr20 37280456 37280609 -34873273 + AluSx SINE Alu 114 303 -9 1265 142 0 10 chr20 37280754 37280951 -34872931 - AluSx SINE Alu -117 195 1 271 146 21 0 chr20 37280989 37281037 -34872845 + MER58B DNA MER1_type 250 298 -43 1637 126 96 4 chr20 37281041 37281302 -34872580 + AluSq SINE Alu 3 287 -26 21 0 0 0 chr20 37281336 37281357 -34872525 + AT_rich Low_complexity Low_complexity 1 21 0 1714 152 55 14 chr20 37281417 37281706 -34872176 - AluSx SINE Alu -11 301 1 22 35 0 0 chr20 37281710 37281739 -34872143 + AT_rich Low_complexity Low_complexity 1 29 0 1717 161 14 7 chr20 37282111 37282396 -34871486 + AluSx SINE Alu 1 287 -25 1608 128 31 31 chr20 37282596 37282854 -34871028 - AluSc SINE Alu -51 258 1 858 205 12 0 chr20 37282950 37283111 -34870771 - FRAM SINE Alu -17 159 1 274 271 74 16 chr20 37283618 37283740 -34870142 + L1MB4 LINE L1 5900 6028 -152 2183 129 0 0 chr20 37283745 37284056 -34869826 + AluY SINE Alu 1 311 0 559 205 8 39 chr20 37284078 37284205 -34869677 - FLAM_A SINE Alu -9 133 11 2461 73 0 3 chr20 37284271 37284574 -34869308 + AluY SINE Alu 1 302 -9 2208 105 3 3 chr20 37285062 37285357 -34868525 - AluSq SINE Alu -18 295 1 1433 212 0 4 chr20 37285402 37285666 -34868216 + AluJb SINE Alu 25 287 -25 2106 122 20 0 chr20 37285669 37285965 -34867917 + AluSq SINE Alu 1 302 -11 25 0 0 0 chr20 37286427 37286452 -34867430 + AT_rich Low_complexity Low_complexity 1 25 0 25 75 0 0 chr20 37286791 37286844 -34867038 + AT_rich Low_complexity Low_complexity 1 53 0 724 152 9 0 chr20 37286851 37286963 -34866919 - L1PB2 LINE L1 -6 6145 6033 442 261 0 0 chr20 37286999 37287087 -34866795 - FLAM_A SINE Alu -23 119 32 836 124 0 0 chr20 37287087 37287200 -34866682 - AluSq/x SINE Alu -200 113 1 2179 116 0 6 chr20 37287272 37287583 -34866299 - AluSq SINE Alu -4 309 1 2168 119 7 0 chr20 37287747 37288050 -34865832 - AluY SINE Alu -6 305 1 1520 130 13 9 chr20 37288450 37288681 -34865201 - AluSg/x SINE Alu -15 297 66 1155 199 11 33 chr20 37288724 37288995 -34864887 + AluJo SINE Alu 44 308 -4 1993 113 7 20 chr20 37289106 37289262 -34864620 - AluSc SINE Alu -21 288 136 2387 65 10 16 chr20 37289262 37289571 -34864311 - AluSq SINE Alu -6 307 1 1993 113 7 20 chr20 37289571 37289706 -34864176 - AluSc SINE Alu -173 136 1 483 153 145 15 chr20 37289924 37290055 -34863827 + L1MA5 LINE L1 6151 6298 -2 2198 104 0 0 chr20 37290116 37290405 -34863477 + AluSg SINE Alu 1 289 -21 1753 171 7 0 chr20 37290415 37290730 -34863152 + AluSx SINE Alu 1 317 0 261 249 52 75 chr20 37291440 37291613 -34862269 - L1ME4a LINE L1 -23 6098 5930 230 240 91 50 chr20 37292600 37292721 -34861161 - MIR SINE MIR -47 215 90 1982 113 0 4 chr20 37293916 37294182 -34859700 + AluSg SINE Alu 22 286 -24 2097 130 3 0 chr20 37294641 37294940 -34858942 + AluSq SINE Alu 1 300 -13 1976 145 7 3 chr20 37294947 37295251 -34858631 + AluSx SINE Alu 3 307 -5 2330 88 0 7 chr20 37298274 37298570 -34855312 - AluSc SINE Alu -15 294 1 1987 115 7 11 chr20 37298608 37298729 -34855153 + AluSq SINE Alu 13 133 -180 2197 120 0 0 chr20 37298729 37299030 -34854852 + AluSg SINE Alu 1 301 -9 1987 115 7 11 chr20 37299030 37299194 -34854688 + AluSq SINE Alu 133 297 -16 2206 93 45 0 chr20 37299200 37299491 -34854391 + AluY SINE Alu 1 304 -7 1911 126 3 13 chr20 37299491 37299792 -34854090 + AluY SINE Alu 1 298 -13 809 113 0 0 chr20 37299793 37299908 -34853974 + AluSg/x SINE Alu 186 300 -9 2445 78 3 0 chr20 37302644 37302953 -34850929 - AluSq SINE Alu -3 310 1 291 140 0 0 chr20 37303607 37303657 -34850225 + (CTG)n Simple_repeat Simple_repeat 1 50 0 254 259 113 67 chr20 37304874 37305029 -34848853 + MIR3 SINE MIR 6 150 -58 200 255 0 0 chr20 37305145 37305192 -34848690 + MIR SINE MIR 168 214 -48 2015 115 33 10 chr20 37305424 37305728 -34848154 + AluSx SINE Alu 1 311 -1 1791 161 3 17 chr20 37306099 37306397 -34847485 + AluJo SINE Alu 3 296 -16 23 0 0 0 chr20 37306595 37306618 -34847264 + AT_rich Low_complexity Low_complexity 1 23 0 860 194 0 18 chr20 37306714 37306879 -34847003 - FRAM SINE Alu -22 154 1 2180 123 3 0 chr20 37306892 37307184 -34846698 + AluSp SINE Alu 1 293 -20 528 135 19 29 chr20 37307191 37307295 -34846587 - L1MA4 LINE L1 -26 6274 6172 635 72 0 0 chr20 37307295 37307378 -34846504 - AluSp/q SINE Alu -6 307 225 279 203 0 0 chr20 37307396 37307455 -34846427 + (TATATG)n Simple_repeat Simple_repeat 2 60 0 2300 98 0 3 chr20 37307456 37307753 -34846129 - AluSx SINE Alu -16 296 1 1697 182 10 0 chr20 37307753 37308044 -34845838 - AluJb SINE Alu -18 294 1 306 169 33 127 chr20 37308307 37308414 -34845468 - FRAM SINE Alu -14 152 70 2188 106 24 0 chr20 37308428 37308721 -34845161 - AluSx SINE Alu -12 300 1 1896 132 3 24 chr20 37308730 37309026 -34844856 - AluSx SINE Alu -22 290 1 1640 178 28 0 chr20 37309029 37309316 -34844566 - AluSx SINE Alu -16 296 2 2270 87 7 3 chr20 37309345 37309643 -34844239 + AluSx SINE Alu 1 299 -13 2359 84 0 3 chr20 37309985 37310281 -34843601 + AluY SINE Alu 1 295 -16 1877 150 30 3 chr20 37310392 37310692 -34843190 + AluSg SINE Alu 1 308 -2 794 156 8 0 chr20 37310860 37310982 -34842900 + AluJo/FLAM SINE Alu 1 123 -179 1436 196 11 11 chr20 37310982 37311263 -34842619 - AluJo SINE Alu -31 281 1 2353 79 23 0 chr20 37311356 37311660 -34842222 - AluSq SINE Alu -2 311 1 305 246 22 1 chr20 37312052 37312145 -34841737 - L1ME2 LINE L1 -1 6163 6073 674 198 0 0 chr20 37312683 37312794 -34841088 + FLAM_A SINE Alu 10 120 -22 2249 112 0 0 chr20 37312906 37313210 -34840672 + AluSg SINE Alu 2 305 -5 3118 158 12 49 chr20 37313223 37313403 -34840479 + L1MB5 LINE L1 5499 5684 -490 2038 129 24 0 chr20 37313403 37313690 -34840192 + AluSx SINE Alu 1 294 -18 3118 158 12 49 chr20 37313690 37313995 -34839887 + L1MB5 LINE L1 5684 5961 -213 2280 104 0 0 chr20 37313995 37314294 -34839588 + AluY SINE Alu 1 299 -12 3118 158 12 49 chr20 37314294 37314400 -34839482 + L1MB5 LINE L1 5961 6069 -105 518 123 61 61 chr20 37315378 37315492 -34838390 + L1MB5 LINE L1 6061 6174 0 668 203 8 17 chr20 37315499 37315617 -34838265 + AluJo SINE Alu 1 117 -185 1227 195 43 28 chr20 37315641 37315923 -34837959 - AluJo SINE Alu -26 286 1 860 235 0 0 chr20 37315951 37316138 -34837744 + AluJo SINE Alu 118 304 -8 2221 102 14 0 chr20 37316231 37316524 -34837358 + AluSg SINE Alu 1 297 -13 2305 97 3 7 chr20 37316564 37316873 -34837009 - AluSx SINE Alu 0 312 5 229 65 0 0 chr20 37316954 37317000 -34836882 - LTR66 LTR ERVL -171 439 394 488 168 11 17 chr20 37317000 37317157 -34836725 + (TA)n Simple_repeat Simple_repeat 1 159 -18 2131 97 3 14 chr20 37317157 37317446 -34836436 - AluSg1 SINE Alu -23 286 1 488 168 11 17 chr20 37317446 37317465 -34836417 + (TA)n Simple_repeat Simple_repeat 159 177 0 401 179 18 89 chr20 37317473 37317585 -34836297 - L2 LINE L2 -30 3283 3180 1926 148 20 7 chr20 37317613 37317911 -34835971 + AluSx SINE Alu 1 302 -10 378 190 0 6 chr20 37317981 37318062 -34835820 + AluS SINE Alu 1 62 -238 183 42 0 0 chr20 37318064 37318088 -34835794 + (A)n Simple_repeat Simple_repeat 1 24 0 273 371 29 7 chr20 37318088 37318228 -34835654 - L2 LINE L2 -264 3008 2866 2073 115 4 0 chr20 37318307 37318585 -34835297 - AluSg SINE Alu -31 279 1 789 177 39 0 chr20 37318585 37318715 -34835167 - AluJo SINE Alu -176 136 2 1583 207 123 10 chr20 37318717 37319123 -34834759 + LTR50 LTR ERVL 344 795 0 229 343 99 29 chr20 37319376 37319618 -34834264 + MIR SINE MIR 1 259 -3 2047 93 4 4 chr20 37319618 37319922 -34833960 + AluSg SINE Alu 1 304 0 1786 118 3 59 chr20 37319922 37320245 -34833637 + Tigger1 DNA MER2_type 1167 1471 -947 1828 140 3 11 chr20 37320246 37320575 -34833307 - AluSx SINE Alu 0 327 1 551 194 0 11 chr20 37320596 37320689 -34833193 - FLAM_C SINE Alu -17 126 35 2065 135 6 0 chr20 37320760 37321071 -34832811 + AluSq SINE Alu 1 313 0 989 119 0 0 chr20 37321089 37321223 -34832659 + AluSq/x SINE Alu 1 134 -178 1989 117 7 19 chr20 37321226 37321534 -34832348 + AluSq SINE Alu 1 304 -9 909 169 26 0 chr20 37321574 37321728 -34832154 - FRAM SINE Alu -23 153 1 1824 136 31 17 chr20 37321735 37322029 -34831853 - AluSg SINE Alu -12 298 1 412 205 9 71 chr20 37322065 37322177 -34831705 - L1MC4a LINE L1 -311 5810 5722 782 124 0 9 chr20 37322177 37322290 -34831592 + AluJ SINE Alu 21 132 -180 1705 182 0 7 chr20 37322290 37322597 -34831285 + AluJb SINE Alu 1 305 -7 23 0 0 0 chr20 37322597 37322620 -34831262 + AT_rich Low_complexity Low_complexity 1 23 0 879 196 21 11 chr20 37322620 37322809 -34831073 + AluJ SINE Alu 121 311 -1 22 70 0 0 chr20 37322880 37322923 -34830959 + AT_rich Low_complexity Low_complexity 1 43 0 1492 123 176 23 chr20 37323002 37323138 -34830744 + AluY SINE Alu 1 115 -186 1870 96 81 0 chr20 37323138 37323409 -34830473 + AluSc SINE Alu 1 293 -16 1492 123 176 23 chr20 37323409 37323533 -34830349 + AluY SINE Alu 115 301 0 1822 140 3 17 chr20 37323855 37324148 -34829734 + AluSp SINE Alu 24 312 -1 2048 110 0 25 chr20 37324538 37324856 -34829026 - AluSg SINE Alu 0 310 1 22 0 0 0 chr20 37324998 37325020 -34828862 + AT_rich Low_complexity Low_complexity 1 22 0 2097 117 3 19 chr20 37325020 37325337 -34828545 + AluSx SINE Alu 1 312 0 2417 67 0 13 chr20 37325376 37325689 -34828193 - AluSc SINE Alu 0 309 1 1861 132 21 11 chr20 37325720 37326033 -34827849 + AluSp SINE Alu 3 313 0 977 170 0 0 chr20 37326033 37326192 -34827690 + AluSq SINE Alu 134 292 -21 1799 128 82 0 chr20 37326236 37326518 -34827364 - AluSg SINE Alu -5 305 1 900 123 14 0 chr20 37326518 37326656 -34827226 - AluSq/x SINE Alu -168 145 6 1643 170 42 0 chr20 37326755 37327038 -34826844 + AluSg SINE Alu 1 295 -15 1828 147 0 11 chr20 37327042 37327392 -34826490 + AluSg SINE Alu 1 347 0 950 112 0 30 chr20 37327396 37327530 -34826352 + FLAM_C SINE Alu 1 130 -3 295 375 31 0 chr20 37327660 37327788 -34826094 - L2 LINE L2 -4 3268 3137 1304 125 54 131 chr20 37327818 37328153 -34825729 + AluYb8 SINE Alu 1 309 -9 2261 82 3 0 chr20 37328157 37328449 -34825433 + AluY SINE Alu 1 293 -18 336 283 71 18 chr20 37328452 37328565 -34825317 + L1MC4a LINE L1 5867 5985 -1823 935 149 0 0 chr20 37328565 37328706 -34825176 + FRAM SINE Alu 9 149 -27 1671 126 8 0 chr20 37329046 37329300 -34824582 - AluSx SINE Alu -56 256 1 2144 103 3 10 chr20 37329308 37329608 -34824274 - AluSx SINE Alu -14 298 1 225 362 123 7 chr20 37331051 37331189 -34822693 + L2 LINE L2 3118 3271 -1 369 208 0 13 chr20 37331404 37331481 -34822401 - U6 snRNA snRNA 0 107 32 2115 106 0 0 chr20 37331481 37331791 -34822091 - AluSx SINE Alu 0 310 1 864 158 0 0 chr20 37331957 37332090 -34821792 + AluJo SINE Alu 1 133 -169 2206 87 0 13 chr20 37332096 37332396 -34821486 + AluSg1 SINE Alu 1 296 -13 1544 170 30 4 chr20 37332413 37332678 -34821204 + AluJb SINE Alu 26 297 -15 318 196 0 0 chr20 37332678 37332729 -34821153 + AluJo SINE Alu 134 184 -118 1091 139 0 6 chr20 37332729 37332901 -34820981 - AluJo SINE Alu -141 171 1 309 330 192 19 chr20 37333008 37333326 -34820556 - L2 LINE L2 -358 2956 2584 223 173 40 27 chr20 37333709 37333784 -34820098 + (CCGGG)n Simple_repeat Simple_repeat 4 79 0 21 89 0 0 chr20 37333955 37334011 -34819871 + GC_rich Low_complexity Low_complexity 1 56 0 536 194 75 0 chr20 37335083 37335217 -34818665 + L1M4 LINE L1 3944 4087 -2059 539 101 0 0 chr20 37335241 37335310 -34818572 + AluJ/FLAM SINE Alu 9 77 -235 381 143 0 107 chr20 37335317 37335401 -34818481 + Charlie1 DNA MER1_type 1945 2019 -742 780 172 0 0 chr20 37335401 37335517 -34818365 + AluJo/FLAM SINE Alu 3 118 -194 439 87 58 0 chr20 37335517 37335586 -34818296 - Alu SINE Alu -7 305 233 243 65 0 0 chr20 37335593 37335624 -34818258 + Charlie1 DNA MER1_type 2731 2761 0 267 247 56 34 chr20 37335635 37335724 -34818158 + L1ME LINE L1 5674 5764 -406 363 44 0 0 chr20 37335728 37335773 -34818109 + (TA)n Simple_repeat Simple_repeat 2 46 0 182 256 58 47 chr20 37336501 37336587 -34817295 + L2 LINE L2 2213 2299 -1015 390 262 9 19 chr20 37336591 37336698 -34817184 + MER5A DNA MER1_type 4 109 -80 225 0 0 0 chr20 37336822 37336847 -34817035 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 440 180 30 0 chr20 37336862 37336962 -34816920 + L2 LINE L2 2446 2548 -766 821 107 8 8 chr20 37336962 37337083 -34816799 + AluSq/x SINE Alu 2 122 -190 1491 261 147 44 chr20 37337130 37337541 -34816341 + L2 LINE L2 2047 2414 -899 1471 161 0 0 chr20 37337541 37337765 -34816117 - AluJo SINE Alu -88 224 1 1491 261 147 44 chr20 37337765 37338371 -34815511 + L2 LINE L2 2414 3180 -133 926 189 11 11 chr20 37338423 37338598 -34815284 - AluJo SINE Alu -20 292 118 283 205 181 0 chr20 37338598 37338681 -34815201 + L2 LINE L2 3211 3308 -5 245 323 205 33 chr20 37338676 37338786 -34815096 - L2 LINE L2 -1518 1796 1706 * 2009 126 16 7 chr20 37338786 37339095 -34814787 - AluSx SINE Alu 0 312 1 245 323 205 33 chr20 37339095 37339291 -34814591 - L2 LINE L2 -1608 1706 1437 213 121 0 0 chr20 37343947 37343980 -34809902 + (CA)n Simple_repeat Simple_repeat 1 33 0 459 216 81 0 chr20 37344109 37344220 -34809662 - L2 LINE L2 0 3313 3194 795 157 0 50 chr20 37345416 37345581 -34808301 - FLAM_C SINE Alu 0 158 1 574 302 60 95 chr20 37345651 37346082 -34807800 + L2 LINE L2 2856 3271 -1 2110 113 10 0 chr20 37346119 37346419 -34807463 + AluSg SINE Alu 1 303 -7 2231 128 0 0 chr20 37347060 37347372 -34806510 + AluSx SINE Alu 1 312 0 2090 131 0 10 chr20 37348457 37348791 -34805091 - AluSx SINE Alu 0 331 1 2097 122 0 28 chr20 37348859 37349038 -34804844 - AluSx SINE Alu 0 312 144 1985 123 0 7 chr20 37349038 37349330 -34804552 - AluSg SINE Alu -16 294 5 2097 122 0 28 chr20 37349330 37349471 -34804411 - AluSx SINE Alu -168 144 1 1669 176 62 0 chr20 37349473 37349763 -34804119 - AluJb SINE Alu -4 308 1 256 345 46 0 chr20 37349768 37349855 -34804027 + L2 LINE L2 3222 3312 -1 1544 166 54 0 chr20 37350253 37350531 -34803351 - AluJo SINE Alu -18 294 2 767 102 0 0 chr20 37350757 37350865 -34803017 + AluY SINE Alu 204 311 0 677 170 0 88 chr20 37350899 37351046 -34802836 + FRAM SINE Alu 38 171 -5 1973 129 3 3 chr20 37351048 37351342 -34802540 + AluSg SINE Alu 1 294 -16 2321 101 0 77 chr20 37351353 37351718 -34802164 - MER1B DNA MER1_type 0 337 1 207 293 0 0 chr20 37351886 37351944 -34801938 + MIR SINE MIR 78 135 -73 2065 118 0 3 chr20 37351984 37352280 -34801602 - AluSx SINE Alu -17 295 1 2317 87 0 0 chr20 37352442 37352741 -34801141 + AluY SINE Alu 1 299 -12 1818 111 15 11 chr20 37352743 37353014 -34800868 - AluSg SINE Alu -38 272 1 2015 138 3 0 chr20 37353284 37353580 -34800302 - AluSx SINE Alu -15 297 1 2290 109 0 0 chr20 37353750 37354062 -34799820 - AluSx SINE Alu 0 312 1 183 267 84 110 chr20 37354062 37354118 -34799764 + MER5A DNA MER1_type 9 65 -124 1987 127 3 29 chr20 37354118 37354433 -34799449 + AluSx SINE Alu 1 307 -5 183 267 84 110 chr20 37354433 37354559 -34799323 + MER5A DNA MER1_type 65 188 -1 672 257 92 16 chr20 37354824 37354967 -34798915 - L2 LINE L2 0 3313 3182 2030 136 0 0 chr20 37354967 37355269 -34798613 + AluJo SINE Alu 1 302 -10 672 257 92 16 chr20 37355269 37355374 -34798508 - L2 LINE L2 -131 3182 3046 2193 103 3 0 chr20 37355404 37355714 -34798168 + AluSx SINE Alu 1 311 -1 2127 92 7 0 chr20 37355715 37356079 -34797803 + AluSp SINE Alu 2 367 0 975 163 6 0 chr20 37356154 37356314 -34797568 + FRAM SINE Alu 1 161 -5 2304 70 10 0 chr20 37357215 37357513 -34796369 - AluSp SINE Alu -12 301 1 201 188 21 0 chr20 37359603 37359651 -34794231 + (CAGAGA)n Simple_repeat Simple_repeat 4 52 0 25 31 0 0 chr20 37359696 37359728 -34794154 + GC_rich Low_complexity Low_complexity 1 32 0 217 221 39 13 chr20 37360030 37360107 -34793775 + (CTGGGG)n Simple_repeat Simple_repeat 1 79 0 229 299 45 0 chr20 37360405 37360472 -34793410 + MIR SINE MIR 112 181 -81 410 321 132 5 chr20 37360494 37360547 -34793335 - MIR SINE MIR -1 261 216 1967 115 7 16 chr20 37360547 37360851 -34793031 - AluSx SINE Alu -8 304 4 410 321 132 5 chr20 37360851 37360987 -34792895 - MIR SINE MIR -46 216 48 708 111 0 0 chr20 37360993 37361092 -34792790 + Alu SINE Alu 203 301 -9 332 310 231 5 chr20 37361768 37361971 -34791911 - MIR SINE MIR 0 262 14 567 264 126 54 chr20 37362446 37362707 -34791175 + L1ME4a LINE L1 5559 5838 -283 1677 116 93 0 chr20 37362749 37363031 -34790851 + AluSc SINE Alu 1 306 0 445 319 54 18 chr20 37363117 37363393 -34790489 + L1ME LINE L1 5539 5824 -297 2160 76 0 14 chr20 37363400 37363717 -34790165 + AluSx SINE Alu 1 313 0 1134 105 0 0 chr20 37363717 37363869 -34790013 + AluSg/x SINE Alu 131 282 -28 339 274 137 20 chr20 37363917 37364063 -34789819 + L1ME LINE L1 5128 5290 -856 2310 91 7 0 chr20 37364153 37364461 -34789421 + AluSg SINE Alu 1 310 0 292 230 119 93 chr20 37364543 37364769 -34789113 + L1ME LINE L1 5563 5794 -327 2108 116 20 0 chr20 37364788 37365091 -34788791 + AluSx SINE Alu 1 309 -3 2277 77 0 3 chr20 37365240 37365540 -34788342 - AluY SINE Alu -12 299 1 2063 132 0 0 chr20 37365714 37366010 -34787872 - AluSx SINE Alu -16 296 1 588 203 31 16 chr20 37366290 37366418 -34787464 - FLAM_A SINE Alu 0 133 4 2264 102 0 0 chr20 37367489 37367793 -34786089 + AluSx SINE Alu 1 304 -8 2809 196 142 43 chr20 37368156 37368447 -34785435 + L1MC4 LINE L1 6896 7157 -885 863 152 0 8 chr20 37368447 37368579 -34785303 + FLAM_A SINE Alu 1 131 -2 2388 62 0 31 chr20 37368583 37368904 -34784978 + AluY SINE Alu 1 311 0 2809 196 142 43 chr20 37368904 37369486 -34784396 + L1MC4 LINE L1 7159 7861 -181 243 88 0 0 chr20 37369625 37369659 -34784223 + (CA)n Simple_repeat Simple_repeat 1 68 0 243 88 0 0 chr20 37369659 37369693 -34784189 + (CA)n Simple_repeat Simple_repeat 2 35 0 301 145 5 18 chr20 37369811 37369886 -34783996 + L1MC4 LINE L1 7923 8042 0 183 80 0 0 chr20 37369888 37369913 -34783969 + (CAGAT)n Simple_repeat Simple_repeat 1 25 0 276 317 59 0 chr20 37370187 37370239 -34783643 - MIR SINE MIR -135 127 80 1921 154 0 29 chr20 37370239 37370545 -34783337 - AluJb SINE Alu -15 297 1 276 317 59 0 chr20 37370545 37370593 -34783289 - MIR SINE MIR -182 80 21 2051 129 0 7 chr20 37370594 37370888 -34782994 + AluSx SINE Alu 1 292 -20 815 234 94 124 chr20 37374068 37374254 -34779628 + L2 LINE L2 2552 2742 -571 2380 97 0 19 chr20 37374254 37374563 -34779319 + AluSq SINE Alu 1 303 -10 2414 74 0 0 chr20 37374563 37374862 -34779020 + AluY SINE Alu 1 299 -12 815 234 94 124 chr20 37374862 37374949 -34778933 + L2 LINE L2 2741 2829 -484 1717 123 8 4 chr20 37374949 37375201 -34778681 + AluSq SINE Alu 55 307 -6 815 234 94 124 chr20 37375201 37375321 -34778561 + L2 LINE L2 2829 2951 -362 1520 177 16 23 chr20 37375321 37375626 -34778256 - AluJo SINE Alu -9 303 1 815 234 94 124 chr20 37375626 37375966 -34777916 + L2 LINE L2 2951 3267 -46 253 368 109 13 chr20 37376481 37376785 -34777097 - L3 LINE CR1 -107 1470 1138 1630 124 105 0 chr20 37377101 37377359 -34776523 + AluSx SINE Alu 1 285 -27 465 274 101 30 chr20 37378272 37378509 -34775373 + L2 LINE L2 2703 2956 -358 209 336 164 9 chr20 37378661 37378777 -34775105 + L2 LINE L2 3136 3269 -3 181 300 90 20 chr20 37378782 37378882 -34775000 - L3 LINE CR1 -641 936 830 2387 208 139 34 chr20 37378882 37379675 -34774207 + L1ME2 LINE L1 5274 6149 -15 2155 114 3 0 chr20 37379929 37380219 -34773663 - AluSx SINE Alu -21 291 1 246 330 165 0 chr20 37381250 37381365 -34772517 + L2 LINE L2 3139 3272 0 342 340 111 7 chr20 37381725 37381878 -34772004 - MIR3 SINE MIR -6 202 34 351 248 150 8 chr20 37382067 37382200 -34771682 + MIR SINE MIR 78 229 -33 258 233 33 0 chr20 37382470 37382530 -34771352 - MER63 DNA MER1_type 0 1061 1000 696 157 0 16 chr20 37383730 37383851 -34770031 + 7SK RNA RNA 7 125 -68 418 119 90 0 chr20 37383884 37383951 -34769931 + 7SK RNA RNA 121 193 0 2042 103 71 0 chr20 37384053 37384335 -34769547 + AluSx SINE Alu 1 302 -10 356 275 80 22 chr20 37384607 37384745 -34769137 + MIR SINE MIR 100 245 -17 231 273 146 9 chr20 37385088 37385198 -34768684 - MIR3 SINE MIR -3 205 81 1255 127 99 130 chr20 37386544 37386866 -34767016 + AluJb SINE Alu 1 312 0 949 106 8 0 chr20 37386974 37387106 -34766776 - FLAM_C SINE Alu 0 133 1 2480 81 0 10 chr20 37387612 37387920 -34765962 + AluSq SINE Alu 1 305 -8 582 136 39 0 chr20 37387920 37388014 -34765868 - U6 snRNA snRNA -6 101 1 2092 101 3 42 chr20 37388356 37388663 -34765219 + AluSg SINE Alu 1 295 -15 23 0 0 0 chr20 37393402 37393425 -34760457 + GC_rich Low_complexity Low_complexity 1 23 0 24 32 0 0 chr20 37396753 37396784 -34757098 + AT_rich Low_complexity Low_complexity 1 31 0 1750 121 107 4 chr20 37397114 37397386 -34756496 - AluSq SINE Alu -9 304 5 2152 94 54 3 chr20 37398362 37398660 -34755222 + AluSq SINE Alu 1 313 0 23 0 0 0 chr20 37398660 37398683 -34755199 + AT_rich Low_complexity Low_complexity 1 23 0 200 286 84 34 chr20 37398694 37398813 -34755069 + MIR3 SINE MIR 67 191 -17 2074 96 3 65 chr20 37399063 37399386 -34754496 + AluSg1 SINE Alu 1 303 -6 333 0 0 0 chr20 37399386 37399423 -34754459 + (CA)n Simple_repeat Simple_repeat 2 38 0 38 0 0 0 chr20 37400236 37400274 -34753608 + AT_rich Low_complexity Low_complexity 1 38 0 2031 98 0 51 chr20 37400786 37401102 -34752780 - AluSx SINE Alu -12 300 1 2714 33 0 3 chr20 37405896 37406203 -34747679 + AluY SINE Alu 1 306 -5 2180 107 10 0 chr20 37406212 37406511 -34747371 + AluSq SINE Alu 1 302 -11 2205 111 0 0 chr20 37406525 37406823 -34747059 + AluSx SINE Alu 1 298 -14 650 160 64 0 chr20 37406891 37407016 -34746866 + AluJo SINE Alu 1 133 -169 1010 168 0 18 chr20 37407076 37407243 -34746639 + AluJo SINE Alu 136 299 -13 542 124 67 0 chr20 37407430 37407519 -34746363 + L1MD3 LINE L1 7729 7823 -172 578 138 156 18 chr20 37407519 37407628 -34746254 + FLAM_C SINE Alu 2 125 -18 488 139 52 160 chr20 37407653 37407712 -34746170 + L1MD3 LINE L1 7818 7882 -113 2333 97 3 3 chr20 37407712 37408023 -34745859 - AluY SINE Alu 0 311 1 2005 115 0 53 chr20 37408026 37408330 -34745552 - AluSx SINE Alu -24 288 1 1897 160 0 3 chr20 37408338 37408626 -34745256 - AluJb SINE Alu -25 287 1 488 139 52 160 chr20 37408626 37408747 -34745135 + L1MD3 LINE L1 7891 7990 -5 259 228 76 0 chr20 37408870 37408949 -34744933 + MER112 DNA MER1_type 10 94 -166 662 303 141 18 chr20 37409045 37409435 -34744447 + L2 LINE L2 2871 3308 -5 2268 78 11 4 chr20 37411703 37411984 -34741898 - AluY SINE Alu -28 283 1 949 195 0 29 chr20 37411984 37412158 -34741724 + AluJo SINE Alu 118 286 -26 2027 164 0 0 chr20 37412191 37412490 -34741392 + AluJb SINE Alu 1 299 -13 2463 72 3 3 chr20 37412535 37412841 -34741041 - AluY SINE Alu -5 306 1 2169 112 0 3 chr20 37412841 37413134 -34740748 - AluSp SINE Alu -20 293 1 2267 120 0 0 chr20 37413589 37413888 -34739994 + AluSx SINE Alu 1 299 -13 431 236 169 7 chr20 37413890 37414038 -34739844 + MER5A DNA MER1_type 18 189 0 289 271 0 0 chr20 37415332 37415391 -34738491 + L2 LINE L2 3196 3254 -18 747 260 0 6 chr20 37416045 37416180 -34737702 + L1MC4a LINE L1 5693 5828 -1980 2017 139 26 0 chr20 37416180 37416482 -34737400 + AluSx SINE Alu 1 310 -2 747 260 0 6 chr20 37416482 37416527 -34737355 + L1MC4a LINE L1 5828 5872 -1936 229 143 20 20 chr20 37416518 37416567 -34737315 + L1MD3 LINE L1 7777 7825 -170 * 2342 89 3 0 chr20 37416587 37416880 -34737002 + AluSp SINE Alu 1 294 -19 2134 125 3 0 chr20 37416889 37417178 -34736704 + AluSg SINE Alu 1 290 -20 243 0 0 0 chr20 37417342 37417369 -34736513 + (A)n Simple_repeat Simple_repeat 1 27 0 2137 123 0 3 chr20 37417447 37417748 -34736134 - AluSg SINE Alu -10 300 1 23 0 0 0 chr20 37417804 37417827 -34736055 + AT_rich Low_complexity Low_complexity 1 23 0 1812 153 0 27 chr20 37417837 37418137 -34735745 + AluJo SINE Alu 5 296 -16 801 167 35 28 chr20 37418370 37418514 -34735368 + AluJo SINE Alu 1 145 -167 1630 184 7 13 chr20 37418516 37418651 -34735231 + AluJo SINE Alu 1 135 -177 2315 84 3 22 chr20 37418651 37418962 -34734920 + AluY SINE Alu 1 305 -6 1220 168 0 120 chr20 37418964 37419297 -34734585 + AluJb SINE Alu 1 293 -19 1630 184 7 13 chr20 37419297 37419462 -34734420 + AluJo SINE Alu 136 302 -10 634 103 9 69 chr20 37419732 37419780 -34734102 - L1MA1 LINE L1 -4 6298 6249 2206 91 32 0 chr20 37419780 37420065 -34733817 - AluSg SINE Alu -16 294 1 634 103 9 69 chr20 37420065 37420132 -34733750 - L1MA1 LINE L1 -53 6249 6190 24 0 0 0 chr20 37420414 37420438 -34733444 + AT_rich Low_complexity Low_complexity 1 24 0 2473 72 0 3 chr20 37420606 37420911 -34732971 + AluY SINE Alu 1 304 -7 193 250 26 0 chr20 37421565 37421641 -34732241 + CT-rich Low_complexity Low_complexity 2 79 0 181 57 57 0 chr20 37421797 37421832 -34732050 + A-rich Low_complexity Low_complexity 2 38 0 2133 142 0 0 chr20 37421999 37422295 -34731587 + AluSx SINE Alu 1 296 -16 214 260 137 0 chr20 37422305 37422378 -34731504 + MIR SINE MIR 47 129 -133 2195 161 48 36 chr20 37422659 37423090 -34730792 + L1MD1 LINE L1 5447 5871 -371 1972 141 31 0 chr20 37423090 37423380 -34730502 + AluSx SINE Alu 1 299 -13 2311 103 0 0 chr20 37423380 37423709 -34730173 + AluY SINE Alu 1 311 0 2195 161 48 36 chr20 37423709 37423780 -34730102 + L1MD1 LINE L1 5870 5956 -286 2282 88 0 10 chr20 37423785 37424082 -34729800 + AluSg SINE Alu 1 294 -16 2358 75 0 40 chr20 37424082 37424404 -34729478 + AluSc SINE Alu 1 309 0 1911 123 54 0 chr20 37424431 37424707 -34729175 + AluSq SINE Alu 3 293 -20 2191 77 11 14 chr20 37424709 37425051 -34728831 + AluY SINE Alu 1 341 0 1943 149 4 0 chr20 37425052 37425328 -34728554 + AluSx SINE Alu 1 277 -35 190 0 67 0 chr20 37425334 37425364 -34728518 + (TAAA)n Simple_repeat Simple_repeat 3 34 0 696 175 9 0 chr20 37425366 37425480 -34728402 + AluJo/FLAM SINE Alu 2 116 -186 2112 125 7 0 chr20 37425480 37425769 -34728113 - AluSx SINE Alu -21 291 1 1197 211 33 72 chr20 37425812 37426116 -34727766 + AluJb SINE Alu 2 293 -9 183 49 73 0 chr20 37426117 37426158 -34727724 + (TA)n Simple_repeat Simple_repeat 1 44 0 2274 97 3 23 chr20 37426160 37426469 -34727413 + AluSq SINE Alu 1 303 -10 1994 106 0 4 chr20 37426509 37426773 -34727109 - AluSq SINE Alu -9 304 42 311 0 227 0 chr20 37426773 37426817 -34727065 - AluS SINE Alu -224 79 26 1118 73 0 0 chr20 37426817 37426954 -34726928 + AluSp/q SINE Alu 167 303 -10 584 172 23 8 chr20 37426983 37427111 -34726771 + L1MB7 LINE L1 6031 6160 -24 8394 35 34 0 chr20 37427306 37427985 -34725897 + LTR13 LTR ERVK 1 724 -283 302 0 26 0 chr20 37427985 37428023 -34725859 + (TC)n Simple_repeat Simple_repeat 2 40 0 8394 35 34 0 chr20 37428023 37428317 -34725565 + LTR13 LTR ERVK 724 1007 0 1188 197 53 63 chr20 37428399 37428545 -34725337 + AluJo SINE Alu 1 147 -155 2127 129 0 16 chr20 37428545 37428848 -34725034 + AluSq SINE Alu 1 298 -15 1957 173 0 7 chr20 37428856 37429163 -34724719 + AluSx SINE Alu 1 305 -7 1188 197 53 63 chr20 37429163 37429306 -34724576 + AluJo SINE Alu 154 296 -6 536 162 0 9 chr20 37429308 37429419 -34724463 + GA-rich Low_complexity Low_complexity 3 112 0 1342 154 0 10 chr20 37429789 37429990 -34723892 + AluSx SINE Alu 1 199 -113 625 75 0 12 chr20 37429990 37430070 -34723812 + AluSg/x SINE Alu 65 143 -167 2353 86 3 13 chr20 37430070 37430372 -34723510 + AluSc SINE Alu 1 299 -10 1407 185 0 80 chr20 37430374 37430699 -34723183 + AluSq SINE Alu 1 299 -14 564 144 0 0 chr20 37430712 37430802 -34723080 + AluSg/x SINE Alu 211 300 -9 544 271 52 38 chr20 37431266 37431476 -34722406 - MER21B LTR ERV1 -125 738 526 1633 122 16 4 chr20 37431483 37431729 -34722153 + L1MC1 LINE L1 6083 6331 -2 328 253 51 0 chr20 37431838 37431917 -34721965 - L2 LINE L2 0 3313 3231 2208 123 7 0 chr20 37432042 37432352 -34721530 + AluSx SINE Alu 1 312 0 2132 110 0 55 chr20 37432353 37432484 -34721398 + AluSg SINE Alu 2 139 -171 2326 111 0 9 chr20 37432484 37432800 -34721082 + AluSp SINE Alu 1 313 0 2132 110 0 55 chr20 37432800 37432995 -34720887 + AluSg SINE Alu 139 310 0 1525 137 86 62 chr20 37433009 37433301 -34720581 + AluJo SINE Alu 9 307 -5 2086 126 0 0 chr20 37433303 37433580 -34720302 + AluSx SINE Alu 1 277 -35 1717 137 112 14 chr20 37433589 37433866 -34720016 + AluSq SINE Alu 1 304 -9 2344 100 3 0 chr20 37433870 37434170 -34719712 + AluSp SINE Alu 1 301 -12 2005 122 65 0 chr20 37434229 37434507 -34719375 - AluSq SINE Alu -17 296 1 2201 181 56 88 chr20 37434507 37435121 -34718761 - L1MC4a LINE L1 -881 6927 6332 1889 139 3 59 chr20 37435126 37435450 -34718432 - AluSx SINE Alu -6 306 1 997 152 0 0 chr20 37435450 37435595 -34718287 - AluJo SINE Alu -167 145 1 939 202 37 61 chr20 37435618 37435915 -34717967 - L1MC4a LINE L1 -1488 6320 6031 2383 88 0 16 chr20 37435915 37436223 -34717659 - AluSc SINE Alu -6 303 1 399 311 51 23 chr20 37436382 37436559 -34717323 + MIR3 SINE MIR 23 204 -4 1150 137 93 90 chr20 37437419 37437507 -34716375 + MER33 DNA MER1_type 1 87 -2498 1170 202 128 57 chr20 37437507 37437632 -34716250 + AluJo SINE Alu 1 116 -186 1699 199 0 3 chr20 37437632 37437939 -34715943 - AluJb SINE Alu -4 308 3 1170 202 128 57 chr20 37437939 37438095 -34715787 + AluJo SINE Alu 116 302 0 1150 137 93 90 chr20 37438095 37438202 -34715680 + MER33 DNA MER1_type 87 192 -2393 2378 86 26 3 chr20 37438202 37438505 -34715377 - AluSx SINE Alu -2 310 1 1150 137 93 90 chr20 37438505 37438554 -34715328 + MER33 DNA MER1_type 192 239 -2346 2591 61 0 6 chr20 37438554 37438865 -34715017 - AluY SINE Alu -2 309 1 1150 137 93 90 chr20 37438865 37438939 -34714943 + MER33 DNA MER1_type 239 322 -2 1044 154 18 0 chr20 37439047 37439216 -34714666 - AluSg/x SINE Alu -7 303 132 278 308 55 14 chr20 37439988 37440087 -34713795 + MIR SINE MIR 45 149 -113 2245 116 7 0 chr20 37440087 37440389 -34713493 + AluSq SINE Alu 1 304 -9 278 308 55 14 chr20 37440389 37440456 -34713426 + MIR SINE MIR 149 212 -50 1713 157 25 11 chr20 37440480 37440761 -34713121 + AluJo SINE Alu 1 285 -27 2050 120 18 7 chr20 37440805 37441088 -34712794 + AluSx SINE Alu 1 286 -26 793 52 52 12 chr20 37441127 37441299 -34712583 + (TA)n Simple_repeat Simple_repeat 2 180 0 1479 241 74 21 chr20 37441366 37442166 -34711716 + L1MEc LINE L1 1887 2692 -3523 1019 182 167 0 chr20 37442201 37442393 -34711489 + MER58A DNA MER1_type 1 224 0 2294 104 3 0 chr20 37444959 37445266 -34708616 - AluSx SINE Alu -4 308 1 1898 146 7 0 chr20 37445824 37446104 -34707778 - AluJb SINE Alu -30 282 1 1459 167 30 66 chr20 37446107 37446199 -34707683 - L1MB3 LINE L1 0 6183 6089 2563 65 3 0 chr20 37446199 37446507 -34707375 + AluY SINE Alu 2 310 -1 1459 167 30 66 chr20 37446507 37446780 -34707102 - L1MB3 LINE L1 -94 6089 5831 471 318 94 49 chr20 37446907 37446977 -34706905 + L2 LINE L2 2837 2902 -411 1658 159 0 33 chr20 37446977 37447253 -34706629 - AluJo SINE Alu -45 267 1 471 318 94 49 chr20 37447253 37447629 -34706253 + L2 LINE L2 2902 3303 -10 2181 136 3 3 chr20 37447650 37447958 -34705924 + AluSq SINE Alu 1 308 -5 859 180 12 0 chr20 37447959 37448131 -34705751 + L1ME2 LINE L1 5690 5863 -301 444 290 46 0 chr20 37448151 37448282 -34705600 - MER82 DNA MER2_type 0 653 517 841 188 0 0 chr20 37448285 37448418 -34705464 + FLAM_C SINE Alu 1 133 0 2274 108 0 0 chr20 37448428 37448714 -34705168 - AluSx SINE Alu -22 290 5 2487 90 0 0 chr20 37449064 37449374 -34704508 + AluSg SINE Alu 1 310 0 22 43 0 21 chr20 37449406 37449436 -34704446 + AT_rich Low_complexity Low_complexity 1 31 -15 1723 91 4 0 chr20 37449436 37449678 -34704204 + MER75B DNA T2_type 1 243 0 22 43 0 21 chr20 37449678 37449694 -34704188 + AT_rich Low_complexity Low_complexity 31 46 0 2048 130 16 23 chr20 37449694 37450002 -34703880 - AluSx SINE Alu 0 312 7 227 226 75 0 chr20 37450038 37450091 -34703791 - MER82 DNA MER2_type -161 492 436 2183 117 0 7 chr20 37450091 37450390 -34703492 - AluSx SINE Alu -7 305 9 828 201 17 17 chr20 37450396 37450575 -34703307 - MER82 DNA MER2_type -445 208 30 666 198 21 142 chr20 37450595 37450838 -34703044 + L1ME2 LINE L1 5901 6105 -59 2038 140 7 0 chr20 37450838 37451123 -34702759 + AluSx SINE Alu 1 287 -25 666 198 21 142 chr20 37451123 37451167 -34702715 + L1ME2 LINE L1 6105 6153 -11 2188 107 0 49 chr20 37451206 37451532 -34702350 + AluSg SINE Alu 1 310 0 2084 122 31 0 chr20 37451581 37451868 -34702014 + AluSx SINE Alu 1 296 -16 1199 168 25 5 chr20 37451928 37452131 -34701751 - AluJo SINE Alu -19 293 87 475 327 28 60 chr20 37452132 37452484 -34701398 + L1MCc LINE L1 102 442 -5981 2134 118 3 50 chr20 37452526 37452847 -34701035 + AluSq SINE Alu 1 306 -7 738 257 85 25 chr20 37453312 37453720 -34700162 + L1MCc LINE L1 1129 1566 -4889 798 237 72 0 chr20 37453736 37453972 -34699910 + L1MCc LINE L1 3312 3564 -3377 664 111 0 0 chr20 37454007 37454106 -34699776 + AluSc SINE Alu 209 307 -2 1671 220 32 36 chr20 37454108 37454542 -34699340 + L1MCc LINE L1 4059 4459 -2482 770 126 0 17 chr20 37454542 37454661 -34699221 + FLAM_C SINE Alu 2 118 -15 1671 220 32 36 chr20 37454661 37454980 -34698902 + L1MCc LINE L1 4459 4778 -2163 2216 88 0 69 chr20 37455161 37455479 -34698403 - AluSx SINE Alu -16 296 1 1807 171 7 3 chr20 37455486 37455778 -34698104 - AluJo SINE Alu -19 293 1 2222 130 0 0 chr20 37455789 37456089 -34697793 - AluSx SINE Alu -12 300 1 2325 123 3 0 chr20 37456351 37456661 -34697221 + AluSx SINE Alu 1 311 -1 1605 150 49 0 chr20 37457081 37457327 -34696555 - AluSx SINE Alu -24 288 31 1509 164 4 16 chr20 37457327 37457576 -34696306 + AluJo SINE Alu 51 297 -15 2290 118 0 6 chr20 37457579 37457894 -34695988 + AluSq SINE Alu 1 313 0 182 349 0 16 chr20 37457903 37457966 -34695916 + L2 LINE L2 3121 3182 -90 1592 141 18 14 chr20 37458049 37458326 -34695556 + L1MB2 LINE L1 5894 6171 0 2351 111 0 0 chr20 37458471 37458778 -34695104 + AluSq SINE Alu 1 307 -6 23 33 0 0 chr20 37458949 37458979 -34694903 + AT_rich Low_complexity Low_complexity 1 30 0 1725 203 7 45 chr20 37459311 37459492 -34694390 + MSTD LTR MaLR 1 187 -209 2126 89 7 18 chr20 37459492 37459802 -34694080 - AluSg SINE Alu 0 307 1 1725 203 7 45 chr20 37459802 37460039 -34693843 + MSTD LTR MaLR 187 396 0 185 246 53 35 chr20 37460048 37460105 -34693777 + L2 LINE L2 2991 3048 -224 1179 178 66 0 chr20 37460213 37460426 -34693456 - AluJo SINE Alu 0 312 86 2255 117 0 0 chr20 37460428 37460727 -34693155 - AluSx SINE Alu -13 299 1 2565 75 0 0 chr20 37460736 37461042 -34692840 - AluY SINE Alu -5 306 1 691 268 19 19 chr20 37461132 37461337 -34692545 - MIR SINE MIR -30 232 28 188 281 18 18 chr20 37461349 37461406 -34692476 - MIR3 SINE MIR -17 191 135 2159 135 3 6 chr20 37461491 37461802 -34692080 - AluSx SINE Alu -2 310 1 1876 162 0 17 chr20 37461804 37462101 -34691781 - AluJb SINE Alu -16 296 5 442 196 62 10 chr20 37462219 37462316 -34691566 + MIR SINE MIR 128 229 -33 614 280 149 90 chr20 37462368 37462432 -34691450 - L3 LINE CR1 -255 1322 1263 2286 89 27 0 chr20 37462432 37462724 -34691158 - AluSg SINE Alu -10 300 1 614 280 149 90 chr20 37462724 37463216 -34690666 - L3 LINE CR1 -314 1263 733 210 253 160 0 chr20 37463236 37463311 -34690571 + MIR SINE MIR 166 252 -10 262 197 106 45 chr20 37463332 37463398 -34690484 + L2 LINE L2 3244 3313 0 612 237 0 53 chr20 37463466 37463618 -34690264 - MIR SINE MIR -111 151 8 2147 133 0 13 chr20 37463996 37464305 -34689577 + AluSx SINE Alu 1 305 -7 1438 163 93 53 chr20 37464312 37464612 -34689270 + AluJo SINE Alu 1 312 0 257 255 8 8 chr20 37464638 37464705 -34689177 + MIR SINE MIR 100 150 -58 458 276 102 76 chr20 37464734 37464959 -34688923 - MIR SINE MIR -1 261 31 2143 141 0 3 chr20 37468650 37468962 -34684920 + AluJb SINE Alu 1 311 -1 238 298 0 0 chr20 37468969 37469026 -34684856 - MIR SINE MIR -67 141 85 428 167 0 98 chr20 37469076 37469178 -34684704 - MIR SINE MIR -85 123 32 358 361 0 0 chr20 37469372 37469530 -34684352 + (TG)n Simple_repeat Simple_repeat 1 158 0 391 257 43 14 chr20 37469871 37470011 -34683871 - MIR3 SINE MIR -6 202 59 447 269 23 23 chr20 37470091 37470221 -34683661 - MIR3 SINE MIR -5 203 74 350 263 125 31 chr20 37470426 37470586 -34683296 + MIR3 SINE MIR 16 190 -18 192 77 0 0 chr20 37471491 37471517 -34682365 + (CAG)n Simple_repeat Simple_repeat 2 27 0 417 20 0 0 chr20 37471822 37471872 -34682010 + (CA)n Simple_repeat Simple_repeat 1 50 0 708 86 0 0 chr20 37472297 37472402 -34681480 + (TG)n Simple_repeat Simple_repeat 2 106 0 2307 73 35 0 chr20 37472726 37473015 -34680867 - AluY SINE Alu -11 300 2 329 359 14 21 chr20 37473178 37473320 -34680562 + L2 LINE L2 2944 3084 -188 2300 109 0 0 chr20 37473395 37473689 -34680193 - AluSx SINE Alu 0 312 19 252 61 0 0 chr20 37473689 37473722 -34680160 + AluYa5 SINE Alu 112 144 -157 538 178 0 0 chr20 37473722 37473823 -34680059 + AluSg/x SINE Alu 206 306 -3 26 0 0 0 chr20 37473823 37473849 -34680033 + AT_rich Low_complexity Low_complexity 1 26 0 360 298 128 21 chr20 37474251 37474392 -34679490 + L2 LINE L2 3117 3272 0 253 397 0 13 chr20 37474428 37474506 -34679376 + L2 LINE L2 3106 3182 -90 567 268 95 12 chr20 37474589 37474757 -34679125 + MIR SINE MIR 15 196 -66 1132 66 0 15 chr20 37474762 37474899 -34678983 + AluY SINE Alu 1 135 -176 2365 97 0 3 chr20 37474945 37475243 -34678639 - AluSc SINE Alu -12 297 1 1776 156 87 0 chr20 37475355 37475631 -34678251 - AluJb SINE Alu -12 300 1 1881 100 4 0 chr20 37475640 37475881 -34678001 - AluSx SINE Alu -15 297 56 282 157 0 0 chr20 37475953 37476004 -34677878 - AluSx SINE Alu -251 51 1 2175 104 7 29 chr20 37476028 37476337 -34677545 - AluSx SINE Alu -10 302 1 180 291 0 0 chr20 37476337 37476392 -34677490 - MIR SINE MIR -56 152 98 2276 95 3 0 chr20 37476993 37477302 -34676580 - AluSx SINE Alu 0 310 1 273 296 139 13 chr20 37477467 37477567 -34676315 + MIR SINE MIR 4 115 -93 1263 238 108 42 chr20 37477579 37478066 -34675816 - L2 LINE L2 -8 3305 2783 2302 108 0 3 chr20 37478075 37478380 -34675502 - AluSg SINE Alu -2 308 5 1093 90 0 35 chr20 37478380 37478525 -34675357 - AluSq/x SINE Alu -172 140 1 235 227 0 45 chr20 37478525 37478591 -34675291 - L2 LINE L2 -536 2778 2716 * 528 266 15 9 chr20 37478576 37478725 -34675157 + MIR SINE MIR 15 164 -63 897 108 8 0 chr20 37478752 37478872 -34675010 + AluJo/FLAM SINE Alu 13 133 -179 2278 112 0 3 chr20 37478874 37479177 -34674705 + AluSg SINE Alu 1 302 -8 2435 87 6 3 chr20 37479179 37479491 -34674391 + AluSp SINE Alu 1 313 0 185 311 85 9 chr20 37479501 37479517 -34674365 + MIR SINE MIR 136 149 -113 2335 105 0 7 chr20 37479517 37479823 -34674059 + AluSq SINE Alu 1 304 -9 185 311 85 9 chr20 37479823 37479912 -34673970 + MIR SINE MIR 149 249 -13 1215 150 0 0 chr20 37479917 37480097 -34673785 - FRAM SINE Alu 0 176 1 180 0 0 0 chr20 37480108 37480128 -34673754 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 457 304 30 7 chr20 37480145 37480280 -34673602 - MIR SINE MIR -105 157 20 508 59 0 0 chr20 37480475 37480543 -34673339 - L1PA5 LINE L1 -1 6153 6086 1855 48 0 13 chr20 37480544 37480775 -34673107 - L1PA5 LINE L1 0 6154 5927 287 54 0 0 chr20 37480776 37480813 -34673069 + L1PA5 LINE L1 5912 5948 -207 28 48 0 0 chr20 37481084 37481126 -34672756 + AT_rich Low_complexity Low_complexity 1 42 0 887 150 0 0 chr20 37481326 37481459 -34672423 + FLAM_C SINE Alu 1 133 0 318 205 0 51 chr20 37481505 37481583 -34672299 - L1ME4a LINE L1 -7 6114 6041 344 273 30 0 chr20 37481738 37481837 -34672045 - MIR SINE MIR -84 178 77 34 24 0 0 chr20 37481884 37481925 -34671957 + AT_rich Low_complexity Low_complexity 1 41 0 2108 128 27 0 chr20 37481943 37482239 -34671643 - AluSx SINE Alu -8 304 1 180 274 143 0 chr20 37482543 37482627 -34671255 + L2 LINE L2 2897 2992 -280 770 194 0 0 chr20 37482639 37482763 -34671119 - FLAM_A SINE Alu -9 124 1 1199 138 0 6 chr20 37482777 37482951 -34670931 - AluJb SINE Alu -19 293 121 274 295 84 68 chr20 37483003 37483193 -34670689 + L2 LINE L2 3121 3313 0 1788 183 0 16 chr20 37483202 37483513 -34670369 + AluJo SINE Alu 7 312 0 2130 113 10 10 chr20 37483515 37483815 -34670067 + AluSx SINE Alu 1 300 -12 510 70 0 0 chr20 37484544 37484615 -34669267 + (TA)n Simple_repeat Simple_repeat 1 71 0 23 0 0 0 chr20 37484649 37484672 -34669210 + AT_rich Low_complexity Low_complexity 1 23 0 883 126 0 8 chr20 37485078 37485205 -34668677 - AluJb SINE Alu -4 308 183 947 142 0 0 chr20 37485205 37485339 -34668543 - FLAM_C SINE Alu -9 134 1 1552 156 34 7 chr20 37485397 37485666 -34668216 + MER1B DNA MER1_type 1 276 -63 181 326 0 0 chr20 37485796 37485842 -34668040 + L2 LINE L2 3268 3313 0 2371 86 3 0 chr20 37485936 37486227 -34667655 - AluSp SINE Alu -21 292 1 857 280 172 23 chr20 37486310 37486473 -34667409 - L2 LINE L2 0 3313 3176 2382 83 0 3 chr20 37486473 37486774 -34667108 + AluY SINE Alu 1 300 -11 857 280 172 23 chr20 37486774 37486964 -34666918 - L2 LINE L2 -137 3176 2907 381 263 114 18 chr20 37487328 37487442 -34666440 - L2 LINE L2 0 3272 3148 418 275 138 6 chr20 37487442 37487609 -34666273 + MER5A DNA MER1_type 1 189 0 2570 47 0 7 chr20 37487677 37487975 -34665907 + AluSc SINE Alu 1 296 -13 2505 60 3 0 chr20 37489401 37489699 -34664183 - AluSp SINE Alu -14 299 1 531 231 23 44 chr20 37489704 37489862 -34664020 - MIR SINE MIR -65 143 40 216 291 76 13 chr20 37490191 37490270 -34663612 + MIR SINE MIR 1 84 -178 2073 125 14 3 chr20 37490291 37490586 -34663296 - AluSx SINE Alu -14 298 1 264 358 22 56 chr20 37490688 37490867 -34663015 - L2 LINE L2 -22 3291 3119 861 159 76 0 chr20 37490877 37491022 -34662860 - FRAM SINE Alu -10 166 11 467 127 0 13 chr20 37491033 37491112 -34662770 - FLAM_A SINE Alu -10 132 55 1374 146 0 10 chr20 37491112 37491318 -34662564 + AluSg/x SINE Alu 94 297 -15 463 228 101 7 chr20 37491319 37491468 -34662414 - L2 LINE L2 -1118 2196 2034 187 358 125 0 chr20 37491842 37491962 -34661920 + L2 LINE L2 3138 3272 0 471 154 222 0 chr20 37492349 37492466 -34661416 - L1MC3 LINE L1 0 7785 7643 866 106 0 124 chr20 37492473 37492634 -34661248 - FLAM_C SINE Alu -2 141 1 383 250 115 0 chr20 37492686 37492782 -34661100 + MIR3 SINE MIR 98 204 -4 25 51 0 0 chr20 37492788 37492827 -34661055 + AT_rich Low_complexity Low_complexity 1 39 0 419 88 0 121 chr20 37492950 37493003 -34660879 - MER116 DNA Mariner 0 80 41 1351 211 34 14 chr20 37493003 37493297 -34660585 + AluJo SINE Alu 1 300 -12 419 88 0 121 chr20 37493297 37493334 -34660548 - MER116 DNA Mariner -39 41 1 329 213 0 0 chr20 37493955 37494016 -34659866 - Charlie8 DNA MER1_type -2155 262 202 249 208 0 0 chr20 37494017 37494065 -34659817 - Charlie8 DNA MER1_type -2171 246 199 * 715 237 29 24 chr20 37494058 37494265 -34659617 - Charlie8 DNA MER1_type -2168 249 42 283 315 11 0 chr20 37494833 37494925 -34658957 - MIR SINE MIR -96 112 20 541 254 21 121 chr20 37495100 37495340 -34658542 + MIR SINE MIR 37 252 -10 249 194 290 0 chr20 37495500 37495562 -34658320 - L2 LINE L2 -4 3268 3189 273 283 26 35 chr20 37495624 37495737 -34658145 - MER103 DNA DNA -1 165 54 188 125 181 56 chr20 37496200 37496272 -34657610 - MIR SINE MIR -46 216 136 1037 181 0 0 chr20 37496278 37496438 -34657444 - AluJb SINE Alu -20 292 133 192 40 0 0 chr20 37496553 37496578 -34657304 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 2310 112 0 0 chr20 37496629 37496925 -34656957 + AluSx SINE Alu 1 296 -16 358 158 79 40 chr20 37497649 37497724 -34656158 + Tigger5 DNA MER2_type 1 78 -2245 236 217 0 0 chr20 37497724 37497770 -34656112 - Tigger5 DNA MER2_type -3 2320 2275 1550 184 49 26 chr20 37497801 37498106 -34655776 - AluJo SINE Alu 0 312 1 2293 106 7 3 chr20 37498149 37498451 -34655431 + AluSg SINE Alu 1 303 -7 338 213 80 0 chr20 37498464 37498539 -34655343 + Tigger5 DNA MER2_type 2242 2322 -1 292 256 15 131 chr20 37498552 37498646 -34655236 - MIR SINE MIR -75 187 112 2353 122 0 0 chr20 37498646 37498957 -34654925 + AluSx SINE Alu 1 311 -1 292 256 15 131 chr20 37498957 37498999 -34654883 - MIR SINE MIR -150 112 67 415 271 32 78 chr20 37501306 37501452 -34652430 + L2 LINE L2 2871 3005 -267 2238 108 3 14 chr20 37501452 37501749 -34652133 - AluSx SINE Alu -10 302 9 415 271 32 78 chr20 37501749 37501820 -34652062 + L2 LINE L2 3005 3078 -194 190 282 0 99 chr20 37502133 37502183 -34651699 + L2 LINE L2 3244 3287 -26 1956 153 7 7 chr20 37502183 37502484 -34651398 - AluJo SINE Alu -11 301 1 190 282 0 99 chr20 37502484 37502504 -34651378 + L2 LINE L2 3287 3307 -6 1413 127 86 49 chr20 37502581 37502826 -34651056 + AluJo SINE Alu 46 299 -13 201 74 0 0 chr20 37503303 37503330 -34650552 + (TTGGGG)n Simple_repeat Simple_repeat 6 32 0 193 235 147 0 chr20 37503656 37503724 -34650158 - L2 LINE L2 0 3313 3236 704 269 131 87 chr20 37503758 37503976 -34649906 + L3 LINE CR1 1088 1295 -282 2289 97 0 10 chr20 37503976 37504275 -34649607 + AluSp SINE Alu 1 296 -17 704 269 131 87 chr20 37504275 37504468 -34649414 + L3 LINE CR1 1295 1517 -60 677 272 94 0 chr20 37504790 37505003 -34648879 - Charlie8 DNA MER1_type -2154 263 31 446 260 221 0 chr20 37505164 37505345 -34648537 - MIR SINE MIR 0 262 42 244 239 159 11 chr20 37507740 37507828 -34646054 - L2 LINE L2 -15 3298 3198 287 305 66 15 chr20 37508203 37508379 -34645503 + MIR SINE MIR 20 250 -12 409 200 84 21 chr20 37508564 37508659 -34645223 + FRAM SINE Alu 1 99 -77 627 252 71 24 chr20 37508674 37508928 -34644954 - L1MC4a LINE L1 -1736 6072 5807 250 354 100 19 chr20 37509234 37509678 -34644204 + L2 LINE L2 2584 3070 -202 2024 130 3 43 chr20 37510369 37510524 -34643358 - AluSx SINE Alu -23 289 150 2255 116 3 0 chr20 37510524 37510818 -34643064 - AluSq SINE Alu -18 295 1 2024 130 3 43 chr20 37510818 37510963 -34642919 - AluSx SINE Alu -162 150 1 210 304 96 40 chr20 37511105 37511230 -34642652 + L2 LINE L2 3163 3294 -19 229 216 159 11 chr20 37511646 37511734 -34642148 - HAL1b LINE L1 -11 1337 1237 2332 92 10 0 chr20 37511793 37512086 -34641796 + AluSg SINE Alu 1 296 -14 488 298 60 13 chr20 37512195 37512346 -34641536 + L2 LINE L2 3115 3272 0 358 263 0 0 chr20 37513782 37513862 -34640020 + MIR SINE MIR 183 262 0 576 299 103 93 chr20 37513993 37514088 -34639794 - L1MEc LINE L1 -4102 2208 2115 2184 108 23 10 chr20 37514088 37514394 -34639488 - AluSg SINE Alu 0 310 1 576 299 103 93 chr20 37514394 37514644 -34639238 - L1MEc LINE L1 -4195 2115 1869 1937 138 17 14 chr20 37514644 37514940 -34638942 + AluJb SINE Alu 1 297 -15 576 299 103 93 chr20 37514940 37515202 -34638680 - L1MEc LINE L1 -4441 1869 1611 2071 150 10 3 chr20 37515202 37515509 -34638373 - AluJb SINE Alu -3 309 1 576 299 103 93 chr20 37515509 37515557 -34638325 - L1MEc LINE L1 -4699 1611 1565 522 0 0 0 chr20 37515557 37515615 -34638267 + (TAGA)n Simple_repeat Simple_repeat 4 61 0 576 299 103 93 chr20 37515615 37515675 -34638207 - L1MEc LINE L1 -4745 1565 1483 2391 76 3 28 chr20 37515730 37516047 -34637835 - AluY SINE Alu -2 309 1 2183 118 6 22 chr20 37516052 37516367 -34637515 - AluSx SINE Alu -1 311 2 266 272 19 19 chr20 37516397 37516500 -34637382 - L1MEc LINE L1 -4862 1257 1155 22 56 0 0 chr20 37516511 37516547 -34637335 + AT_rich Low_complexity Low_complexity 1 36 0 2377 98 3 0 chr20 37516547 37516843 -34637039 + AluSp SINE Alu 1 297 -16 1705 141 15 78 chr20 37516846 37517179 -34636703 - AluJo SINE Alu 0 312 1 784 225 49 63 chr20 37517179 37517668 -34636214 - L1MEc LINE L1 -4957 1162 681 228 135 0 0 chr20 37517675 37517712 -34636170 + (T)n Simple_repeat Simple_repeat 1 37 0 524 279 125 14 chr20 37517740 37517948 -34635934 - L1MEc LINE L1 -5448 671 441 833 181 0 0 chr20 37518123 37518256 -34635626 - FLAM_A SINE Alu 0 133 1 1141 205 111 30 chr20 37518256 37518468 -34635414 - MER58B DNA MER1_type -2096 324 130 742 116 116 16 chr20 37518468 37518589 -34635293 + FLAM_C SINE Alu 1 133 0 2419 94 3 7 chr20 37518598 37518905 -34634977 + AluSx SINE Alu 1 306 -6 1141 205 111 30 chr20 37518905 37518980 -34634902 - MER58B DNA MER1_type -2297 123 3 989 163 0 7 chr20 37518988 37519141 -34634741 - FRAM SINE Alu -3 173 22 2138 123 13 25 chr20 37519156 37519472 -34634410 - AluJb SINE Alu 0 312 1 24 0 0 0 chr20 37519479 37519503 -34634379 + AT_rich Low_complexity Low_complexity 1 24 0 1433 131 86 0 chr20 37519538 37519759 -34634123 - AluSg/x SINE Alu -7 305 66 1615 171 7 48 chr20 37519759 37520052 -34633830 - AluJo SINE Alu -31 281 1 395 255 45 19 chr20 37520063 37520220 -34633662 - L1MEc LINE L1 -5955 164 4 237 182 23 0 chr20 37520317 37520361 -34633521 + L2 LINE L2 3264 3308 -5 2404 98 0 7 chr20 37520695 37521001 -34632881 + AluSx SINE Alu 1 304 -8 188 356 17 0 chr20 37521060 37521119 -34632763 - MIR SINE MIR 0 262 203 911 115 0 8 chr20 37521162 37521292 -34632590 + FLAM_C SINE Alu 1 129 -4 180 286 0 20 chr20 37521307 37521356 -34632526 - MIR SINE MIR -169 93 46 215 267 267 8 chr20 37521375 37521495 -34632387 - L3 LINE CR1 -74 1503 1353 324 306 219 23 chr20 37521533 37521798 -34632084 - L3 LINE CR1 -417 1160 844 233 135 0 0 chr20 37521803 37521840 -34632042 - tRNA-Cys-TGC tRNA tRNA -38 37 1 2024 146 0 31 chr20 37521951 37522273 -34631609 - AluJb SINE Alu 0 312 1 468 245 106 48 chr20 37522291 37522413 -34631469 - L2 LINE L2 -256 3057 2917 2329 100 0 7 chr20 37522413 37522712 -34631170 + AluSx SINE Alu 1 297 -15 468 245 106 48 chr20 37522712 37522797 -34631085 - L2 LINE L2 -396 2917 2838 709 231 93 13 chr20 37522918 37523143 -34630739 - MIR SINE MIR -16 246 4 759 173 0 0 chr20 37523407 37523534 -34630348 + FLAM_A SINE Alu 1 127 -6 2249 125 0 0 chr20 37523540 37523845 -34630037 + AluSx SINE Alu 1 305 -7 26 0 0 0 chr20 37523915 37523941 -34629941 + AT_rich Low_complexity Low_complexity 1 26 0 292 267 117 50 chr20 37523945 37524065 -34629817 - MIR SINE MIR -70 192 65 262 287 11 46 chr20 37524898 37524985 -34628897 - L2 LINE L2 0 3313 3230 971 119 8 0 chr20 37524996 37525130 -34628752 + AluSq/x SINE Alu 1 135 -177 2167 114 23 0 chr20 37525130 37525429 -34628453 + AluSx SINE Alu 1 306 -6 971 288 91 24 chr20 37525437 37525689 -34628193 - L2 LINE L2 -69 3244 3011 1484 172 61 9 chr20 37525689 37526015 -34627867 + L1MB8 LINE L1 5836 6178 0 971 288 91 24 chr20 37526015 37526236 -34627646 - L2 LINE L2 -302 3011 2739 2106 132 0 0 chr20 37526249 37526536 -34627346 - AluSx SINE Alu -23 289 3 230 196 0 0 chr20 37526581 37526637 -34627245 + LTR66 LTR ERVL 401 456 -154 190 273 18 0 chr20 37526683 37526738 -34627144 - L2 LINE L2 -664 2650 2595 1796 165 30 24 chr20 37527487 37527784 -34626098 - AluJo SINE Alu -13 299 1 782 289 124 47 chr20 37528333 37528897 -34624985 - L2 LINE L2 -1 3312 2694 2069 114 47 13 chr20 37528990 37529289 -34624593 + AluSx SINE Alu 1 309 -3 334 319 47 62 chr20 37529330 37529669 -34624213 - L2 LINE L2 -665 2649 2316 1252 129 0 0 chr20 37529701 37529872 -34624010 + AluSg/x SINE Alu 133 303 -7 218 294 47 24 chr20 37529874 37529959 -34623923 + MIR SINE MIR 176 262 0 796 289 32 4 chr20 37531666 37531915 -34621967 + MIR SINE MIR 1 256 -6 237 331 108 0 chr20 37532332 37532462 -34621420 + MIR SINE MIR 49 192 -70 2285 127 0 0 chr20 37532505 37532805 -34621077 + AluSq SINE Alu 1 300 -13 208 362 78 0 chr20 37532991 37533107 -34620775 - L2 LINE L2 -10 3303 3179 862 177 171 11 chr20 37533774 37533955 -34619927 - AluSx SINE Alu -11 298 89 204 304 18 0 chr20 37533993 37534049 -34619833 - MIR3 SINE MIR -9 199 143 609 96 0 0 chr20 37534140 37534223 -34619659 - AluSx SINE Alu -229 83 1 1414 115 0 5 chr20 37534677 37534869 -34619013 + AluSg/x SINE Alu 110 300 -10 182 339 18 0 chr20 37535008 37535064 -34618818 - MIR3 SINE MIR -9 199 143 195 42 0 0 chr20 37535327 37535351 -34618531 + (TCTCC)n Simple_repeat Simple_repeat 4 27 0 478 252 75 116 chr20 37538659 37538882 -34615000 - L2 LINE L2 -43 3229 3019 2438 96 0 0 chr20 37538882 37539184 -34614698 + AluSx SINE Alu 1 302 -10 478 252 75 116 chr20 37539184 37539254 -34614628 - L2 LINE L2 -253 3019 2948 307 296 200 22 chr20 37539307 37539662 -34614220 - L2 LINE L2 -453 2861 2444 227 298 60 0 chr20 37539904 37539988 -34613894 + L2 LINE L2 3164 3252 -20 272 309 43 0 chr20 37540212 37540306 -34613576 + MIR SINE MIR 50 147 -115 250 275 0 109 chr20 37540814 37540952 -34612930 - MIR SINE MIR -120 142 20 258 330 68 10 chr20 37541014 37541117 -34612765 + MIR3 SINE MIR 51 159 -49 481 157 116 107 chr20 37541765 37541826 -34612056 + MER58A DNA MER1_type 4 63 -278 2219 124 0 3 chr20 37541826 37542125 -34611757 - AluSg SINE Alu -12 298 1 481 157 116 107 chr20 37542125 37542184 -34611698 + MER58A DNA MER1_type 63 125 -99 263 324 86 0 chr20 37543141 37543246 -34610636 + L2 LINE L2 3154 3267 -5 2028 152 0 3 chr20 37544228 37544518 -34609364 + AluSx SINE Alu 4 292 -20 260 204 54 43 chr20 37544522 37544615 -34609267 + L1ME2 LINE L1 6062 6155 -9 209 262 33 0 chr20 37544629 37544690 -34609192 - MER5B DNA MER1_type -115 63 1 287 344 62 0 chr20 37545586 37545714 -34608168 - L2 LINE L2 -28 3244 3109 895 204 0 0 chr20 37546216 37546368 -34607514 - FRAM SINE Alu -21 155 4 2414 96 3 13 chr20 37546756 37547070 -34606812 - AluSp SINE Alu -2 311 1 1225 138 0 6 chr20 37551115 37551289 -34602593 + AluJb SINE Alu 134 306 -6 1647 145 93 24 chr20 37551299 37551589 -34602293 + AluJb SINE Alu 2 311 -1 365 228 41 87 chr20 37551960 37552179 -34601703 - L1MC5 LINE L1 -865 7096 6888 229 243 71 138 chr20 37552211 37552260 -34601622 - L1MC4a LINE L1 -1072 6736 6685 2317 99 3 10 chr20 37552260 37552574 -34601308 + AluSx SINE Alu 1 312 0 229 243 71 138 chr20 37552574 37552673 -34601209 - L1MC4a LINE L1 -1123 6685 6581 411 132 57 38 chr20 37552673 37552779 -34601103 + L1MB3 LINE L1 6073 6180 -3 229 243 71 138 chr20 37552779 37552813 -34601069 - L1MC4a LINE L1 -1227 6581 6570 2516 76 7 0 chr20 37552813 37553117 -34600765 + AluSg SINE Alu 1 306 -4 229 243 71 138 chr20 37553117 37553171 -34600711 - L1MC4a LINE L1 -1238 6570 6514 2247 139 0 0 chr20 37553175 37553484 -34600398 - AluSx SINE Alu -3 309 1 1204 212 0 5 chr20 37553529 37553751 -34600131 + AluJb SINE Alu 78 298 -14 2282 103 3 0 chr20 37553795 37554085 -34599797 - AluSg SINE Alu -19 291 1 409 285 111 64 chr20 37554099 37554334 -34599548 - L1MC4a LINE L1 -1455 6353 6108 309 200 183 78 chr20 37554926 37555121 -34598761 - L2 LINE L2 -339 2975 2751 2434 87 3 0 chr20 37555121 37555419 -34598463 - AluSp SINE Alu -14 299 1 309 200 183 78 chr20 37555419 37555453 -34598429 - L2 LINE L2 -563 2751 2722 515 132 0 0 chr20 37557347 37557423 -34596459 + AluJ/FLAM SINE Alu 9 84 -228 1928 132 64 10 chr20 37557536 37557832 -34596050 - AluSx SINE Alu 0 312 1 564 199 83 13 chr20 37557832 37557988 -34595894 - Charlie5 DNA MER1_type -205 2407 2241 375 118 79 0 chr20 37557987 37558063 -34595819 - Charlie5 DNA MER1_type -2488 124 43 * 303 253 50 30 chr20 37558117 37558211 -34595671 - HAL1 LINE L1 -344 2163 2067 2470 94 0 0 chr20 37558211 37558510 -34595372 - AluSq SINE Alu -14 299 1 304 243 27 14 chr20 37558521 37558595 -34595287 - HAL1 LINE L1 -810 1697 1623 882 213 18 73 chr20 37558603 37558781 -34595101 + MLT1C LTR MaLR 8 166 -301 2277 103 3 3 chr20 37558781 37559073 -34594809 + AluSq SINE Alu 1 292 -21 882 213 18 73 chr20 37559073 37559151 -34594731 + MLT1C LTR MaLR 166 248 -219 1486 124 66 12 chr20 37559151 37559409 -34594473 - MER66B LTR ERV1 0 486 215 283 208 94 83 chr20 37559405 37559501 -34594381 - AluJ/FLAM SINE Alu -226 76 1 * 260 288 78 58 chr20 37559505 37559710 -34594172 - LTR67 LTR ERVL 0 557 349 483 263 7 2 chr20 37559719 37559855 -34594027 + MLT1H LTR MaLR 1 174 -375 1961 173 0 10 chr20 37559856 37560163 -34593719 + AluJo SINE Alu 2 305 -7 288 337 54 65 chr20 37560164 37560425 -34593457 + L1MEd LINE L1 307 564 -5555 1805 113 12 110 chr20 37561137 37561464 -34592418 - AluJb SINE Alu -17 295 1 297 243 189 36 chr20 37563287 37563398 -34590484 + L2 LINE L2 3185 3312 -1 2376 103 0 3 chr20 37563416 37563716 -34590166 - AluSx SINE Alu -13 299 1 2246 100 0 17 chr20 37563722 37564062 -34589820 - AluSq SINE Alu 0 313 1 526 310 91 33 chr20 37564073 37564262 -34589620 + L2 LINE L2 2204 2381 -933 2278 113 0 13 chr20 37564262 37564572 -34589310 - AluSx SINE Alu -6 306 1 526 310 91 33 chr20 37564572 37564672 -34589210 + L2 LINE L2 2381 2474 -840 1548 188 30 17 chr20 37564672 37564838 -34589044 - AluSx SINE Alu -10 302 129 2109 138 0 7 chr20 37564838 37565142 -34588740 - AluSx SINE Alu -5 307 6 1548 188 30 17 chr20 37565142 37565273 -34588609 - AluSx SINE Alu -183 129 1 526 310 91 33 chr20 37565273 37565346 -34588536 + L2 LINE L2 2474 2588 -726 455 200 17 165 chr20 37565543 37565619 -34588263 + L1MD3 LINE L1 7800 7886 -109 2287 92 10 16 chr20 37565619 37565923 -34587959 + AluSp SINE Alu 1 302 -11 455 200 17 165 chr20 37565923 37565971 -34587911 + L1MD3 LINE L1 7886 7939 -56 1757 149 61 10 chr20 37565971 37566083 -34587799 + AluJo SINE Alu 1 106 -206 423 0 0 0 chr20 37566083 37566130 -34587752 + (CA)n Simple_repeat Simple_repeat 2 48 0 1757 149 61 10 chr20 37566130 37566312 -34587570 + AluJo SINE Alu 106 310 -2 455 200 17 165 chr20 37566312 37566416 -34587466 + L1MD3 LINE L1 7939 7995 0 1122 154 97 15 chr20 37566422 37566617 -34587265 + AluJo SINE Alu 84 294 -18 2255 116 0 0 chr20 37566678 37566972 -34586910 - AluSc SINE Alu -15 294 1 2345 116 3 0 chr20 37567042 37567344 -34586538 + AluSx SINE Alu 1 303 -9 279 0 0 0 chr20 37567344 37567358 -34586524 + (TG)n Simple_repeat Simple_repeat 1 45 0 279 0 0 0 chr20 37567358 37567389 -34586493 + (TG)n Simple_repeat Simple_repeat 2 32 0 1316 112 18 22 chr20 37567426 37567453 -34586429 - L1PA10 LINE L1 -8 6160 6134 2217 100 20 17 chr20 37567453 37567754 -34586128 + AluSc SINE Alu 1 302 -7 1316 112 18 22 chr20 37567754 37567949 -34585933 - L1PA10 LINE L1 -34 6134 5939 298 143 0 0 chr20 37567969 37568018 -34585864 - L1MB7 LINE L1 -98 6086 6038 823 225 24 89 chr20 37568130 37568440 -34585442 - L1MEd LINE L1 -4884 1235 1004 2254 108 10 3 chr20 37568440 37568736 -34585146 - AluSx SINE Alu -14 298 1 823 225 24 89 chr20 37568736 37568828 -34585054 - L1MEd LINE L1 -5115 1004 908 1171 75 20 0 chr20 37568845 37568992 -34584890 - AluSg/x SINE Alu -14 298 149 255 134 152 0 chr20 37568996 37569062 -34584820 + MIR SINE MIR 88 145 -63 2173 125 0 0 chr20 37569072 37569360 -34584522 + AluSx SINE Alu 9 296 -16 829 138 0 43 chr20 37569747 37569885 -34583997 - FLAM_A SINE Alu -1 132 1 2124 116 10 3 chr20 37569945 37570238 -34583644 + AluSx SINE Alu 1 295 -17 2198 116 0 3 chr20 37570289 37570582 -34583300 - AluSg SINE Alu -18 292 1 193 73 24 24 chr20 37570604 37570645 -34583237 + (TTA)n Simple_repeat Simple_repeat 1 41 0 2322 81 0 56 chr20 37570680 37571003 -34582879 - AluSg SINE Alu -5 305 1 209 350 70 0 chr20 37571004 37571104 -34582778 + L2 LINE L2 3152 3258 -14 2170 116 0 26 chr20 37571156 37571181 -34582701 - AluSq SINE Alu 0 313 289 225 30 30 0 chr20 37571181 37571214 -34582668 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 2170 116 0 26 chr20 37571214 37571498 -34582384 - AluSq SINE Alu -24 289 1 2020 124 0 39 chr20 37571498 37571805 -34582077 - AluSx SINE Alu -15 297 3 619 227 149 7 chr20 37571899 37572053 -34581829 - MER5A DNA MER1_type -1 188 13 209 188 29 14 chr20 37572324 37572340 -34581542 + (TA)n Simple_repeat Simple_repeat 1 15 -55 2682 44 0 22 chr20 37572340 37572658 -34581224 - AluY SINE Alu 0 311 1 209 188 29 14 chr20 37572658 37572710 -34581172 + (TA)n Simple_repeat Simple_repeat 15 70 0 334 284 64 84 chr20 37572712 37573008 -34580874 - L1MCa LINE L1 -4215 2211 1922 * 362 200 41 117 chr20 37572826 37573074 -34580808 + L1MCa LINE L1 1922 2081 -4345 26 0 0 0 chr20 37573074 37573100 -34580782 + AT_rich Low_complexity Low_complexity 1 26 0 395 136 0 0 chr20 37573117 37573176 -34580706 - AluJo SINE Alu -20 282 224 492 198 94 158 chr20 37573335 37573663 -34580219 + MER51A LTR ERV1 328 634 0 1217 149 79 23 chr20 37573684 37573767 -34580115 - AluJo SINE Alu -86 226 149 2097 127 0 3 chr20 37573767 37574058 -34579824 - AluSx SINE Alu -4 308 19 1217 149 79 23 chr20 37574058 37574188 -34579694 - AluJo SINE Alu -163 149 1 360 295 100 34 chr20 37574191 37574464 -34579418 - L1MC4a LINE L1 -328 5826 5636 407 265 34 8 chr20 37574891 37575008 -34578874 + MIR SINE MIR 30 149 -113 390 259 102 0 chr20 37575062 37575170 -34578712 - MER5A DNA MER1_type -70 119 1 301 271 24 0 chr20 37576463 37576548 -34577334 - MIR SINE MIR -71 137 51 297 277 277 13 chr20 37576773 37576932 -34576950 + MIR SINE MIR 19 219 -43 370 214 168 23 chr20 37577110 37577241 -34576641 - L2 LINE L2 -789 2525 2376 749 199 13 0 chr20 37577264 37577415 -34576467 - MLT1F LTR MaLR -2 540 388 470 17 17 0 chr20 37577441 37577500 -34576382 + (TCTA)n Simple_repeat Simple_repeat 2 61 0 2215 92 0 7 chr20 37577500 37577782 -34576100 - AluSc SINE Alu -29 280 1 2301 99 20 0 chr20 37578234 37578536 -34575346 - AluSx SINE Alu -3 309 2 1548 176 62 62 chr20 37578537 37578710 -34575172 - MLT1F LTR MaLR -201 341 166 2307 97 0 29 chr20 37578710 37579021 -34574861 + AluSq SINE Alu 1 302 -11 1548 176 62 62 chr20 37579021 37579188 -34574694 - MLT1F LTR MaLR -375 167 1 1402 238 459 5 chr20 37579197 37580399 -34573483 - L2 LINE L2 -932 2382 635 403 294 61 25 chr20 37580489 37580652 -34573230 + MIR SINE MIR 91 259 -3 223 260 65 39 chr20 37580669 37580746 -34573136 + MIR SINE MIR 183 261 -1 273 292 226 26 chr20 37581175 37581370 -34572512 + MIR SINE MIR 13 246 -16 241 167 0 0 chr20 37581413 37581455 -34572427 - MER5A DNA MER1_type -85 104 63 715 162 49 0 chr20 37581461 37581603 -34572279 - L1MB4 LINE L1 0 6180 6032 921 137 0 34 chr20 37581632 37581778 -34572104 + FLAM_C SINE Alu 3 143 0 658 301 22 0 chr20 37582436 37582619 -34571263 + MIR SINE MIR 2 188 -74 347 239 146 31 chr20 37582718 37582848 -34571034 + MIR SINE MIR 48 192 -70 321 185 261 25 chr20 37582870 37582989 -34570893 - L2 LINE L2 0 3313 3167 235 264 19 0 chr20 37582993 37583046 -34570836 + Tigger5 DNA MER2_type 2 55 -2268 499 110 0 130 chr20 37583046 37583075 -34570807 + Tigger5 DNA MER2_type 2237 2268 -55 2413 104 0 0 chr20 37583075 37583374 -34570508 - AluSx SINE Alu -13 299 1 499 110 0 130 chr20 37583374 37583444 -34570438 + Tigger5 DNA MER2_type 2268 2323 0 5574 256 131 36 chr20 37583445 37583771 -34570111 - L2 LINE L2 -157 3156 2863 2422 103 0 0 chr20 37583771 37584073 -34569809 + AluSx SINE Alu 1 302 -10 5574 256 131 36 chr20 37584073 37584467 -34569415 - L2 LINE L2 -450 2863 2508 2042 121 0 7 chr20 37584467 37584749 -34569133 + AluSx SINE Alu 21 300 -12 5574 256 131 36 chr20 37584749 37586458 -34567424 - L2 LINE L2 -805 2508 398 1526 157 91 21 chr20 37586458 37586744 -34567138 - AluJb SINE Alu 0 312 7 5574 256 131 36 chr20 37586744 37587184 -34566698 - L2 LINE L2 -2915 398 2 314 206 0 0 chr20 37587526 37587589 -34566293 - MIR SINE MIR -68 140 78 303 338 88 13 chr20 37588683 37589013 -34564869 - L2 LINE L2 -242 3030 2646 1149 127 30 0 chr20 37589126 37589291 -34564591 + AluSg/x SINE Alu 137 306 -6 275 209 0 45 chr20 37593486 37593553 -34560329 + G-rich Low_complexity Low_complexity 2 65 0 1313 223 58 69 chr20 37594565 37595044 -34558838 + MLT1K LTR MaLR 3 476 -112 2072 148 0 0 chr20 37595602 37595905 -34557977 + AluJb SINE Alu 1 303 -9 209 171 0 0 chr20 37596465 37596500 -34557382 + C-rich Low_complexity Low_complexity 1 35 0 1885 151 0 59 chr20 37596695 37597019 -34556863 + AluJb SINE Alu 4 308 -4 235 250 29 44 chr20 37597633 37597701 -34556181 - MIR SINE MIR -93 169 103 2155 99 0 0 chr20 37597703 37597976 -34555906 + AluSx SINE Alu 1 273 -39 1267 101 12 0 chr20 37597976 37598145 -34555737 + AluSg/x SINE Alu 123 293 -17 401 88 0 44 chr20 37599123 37599191 -34554691 - AluJo SINE Alu -176 136 72 2406 97 3 0 chr20 37599191 37599500 -34554382 + AluSx SINE Alu 1 310 -2 628 176 0 32 chr20 37599539 37599664 -34554218 - FLAM_C SINE Alu -17 126 6 340 284 29 37 chr20 37599675 37599915 -34553967 - L1MCa LINE L1 -810 1977 1537 682 175 0 16 chr20 37599927 37600053 -34553829 - FLAM_A SINE Alu -5 128 5 227 218 30 113 chr20 37600074 37600100 -34553782 + L2 LINE L2 3113 3140 -173 2431 112 0 0 chr20 37600100 37600412 -34553470 - AluSx SINE Alu 0 312 1 227 218 30 113 chr20 37600412 37600518 -34553364 + L2 LINE L2 3140 3234 -79 1983 130 24 10 chr20 37600615 37600907 -34552975 + AluJb SINE Alu 1 296 -16 2310 206 82 0 chr20 37600913 37601590 -34552292 + L1M3 LINE L1 4737 5466 -714 2520 74 0 3 chr20 37601597 37601907 -34551975 - AluSg SINE Alu -1 309 1 2412 104 0 0 chr20 37601937 37602245 -34551637 + AluSx SINE Alu 1 308 -4 608 290 73 51 chr20 37602245 37602560 -34551322 + L2 LINE L2 2706 3024 -289 902 195 25 0 chr20 37602560 37602719 -34551163 - AluJb SINE Alu -30 282 120 487 80 340 20 chr20 37602736 37602836 -34551046 + FLAM_C SINE Alu 2 133 0 497 201 7 171 chr20 37602891 37602976 -34550906 + L2 LINE L2 3083 3180 -133 2006 113 7 52 chr20 37602976 37603286 -34550596 - AluSp SINE Alu -17 296 1 497 201 7 171 chr20 37603286 37603445 -34550437 + L2 LINE L2 3180 3282 -31 2443 60 40 3 chr20 37603445 37603743 -34550139 + AluSp SINE Alu 1 309 -4 497 201 7 171 chr20 37603743 37603766 -34550116 + L2 LINE L2 3282 3307 -6 297 314 145 4 chr20 37603766 37604008 -34549874 - L1M4 LINE L1 -2424 3722 3447 2030 135 7 3 chr20 37604008 37604297 -34549585 + AluSx SINE Alu 1 290 -22 558 149 45 82 chr20 37604319 37604418 -34549464 - AluJo SINE Alu -80 232 138 2242 119 6 6 chr20 37604418 37604729 -34549153 - AluSx SINE Alu -1 311 1 558 149 45 82 chr20 37604729 37604763 -34549119 - AluJo SINE Alu -174 138 104 2102 120 0 17 chr20 37604763 37605063 -34548819 + AluSg SINE Alu 1 295 -15 2571 215 104 44 chr20 37605064 37605669 -34548213 + L1M4b LINE L1 805 1372 -5483 507 113 0 0 chr20 37605669 37605749 -34548133 + (TATG)n Simple_repeat Simple_repeat 2 81 0 2574 59 7 0 chr20 37605749 37606053 -34547829 - AluY SINE Alu -5 306 1 2571 215 104 44 chr20 37606053 37606184 -34547698 + L1M4b LINE L1 1372 1494 -5361 2194 104 10 10 chr20 37606184 37606482 -34547400 - AluY SINE Alu -13 298 1 2571 215 104 44 chr20 37606482 37606745 -34547137 + L1M4b LINE L1 1494 1858 -4997 2249 112 3 0 chr20 37607005 37607301 -34546581 - AluSq SINE Alu -16 297 1 466 221 121 21 chr20 37607307 37607447 -34546435 + MIR SINE MIR 107 260 -2 2341 106 0 0 chr20 37607447 37607749 -34546133 + AluSg SINE Alu 1 302 -8 1181 119 6 17 chr20 37607749 37607925 -34545957 + AluSg/x SINE Alu 134 307 -5 198 0 0 0 chr20 37607951 37607973 -34545909 + (A)n Simple_repeat Simple_repeat 1 22 0 380 314 51 0 chr20 37608505 37608623 -34545259 - L2 LINE L2 0 3313 3190 430 253 123 19 chr20 37608685 37608847 -34545035 - MIR3 SINE MIR -15 193 15 2094 49 111 28 chr20 37609555 37609843 -34544039 + AluSx SINE Alu 1 312 0 2397 82 3 10 chr20 37610031 37610334 -34543548 + AluSx SINE Alu 1 301 -11 210 286 0 0 chr20 37610507 37610556 -34543326 - L2 LINE L2 -1 3312 3264 296 281 67 0 chr20 37610634 37610723 -34543159 - L2 LINE L2 -240 3073 2979 22 0 0 0 chr20 37610736 37610758 -34543124 + AT_rich Low_complexity Low_complexity 1 22 0 4608 135 77 47 chr20 37610760 37610804 -34543078 - L1MA8 LINE L1 -2 6289 6248 2307 114 3 0 chr20 37610804 37611111 -34542771 - AluSq SINE Alu -1 312 5 4608 135 77 47 chr20 37611111 37611287 -34542595 - L1MA8 LINE L1 -43 6248 6079 2231 61 8 0 chr20 37611287 37611550 -34542332 - AluSp SINE Alu -14 299 35 4608 135 77 47 chr20 37611550 37611764 -34542118 - L1MA8 LINE L1 -212 6079 5873 2289 119 7 0 chr20 37611764 37612067 -34541815 - AluSp SINE Alu -8 305 1 4608 135 77 47 chr20 37612067 37612121 -34541761 - L1MA8 LINE L1 -418 5873 5822 2204 135 0 0 chr20 37612121 37612417 -34541465 - AluSx SINE Alu -16 296 1 4608 135 77 47 chr20 37612417 37612448 -34541434 - L1MA8 LINE L1 -469 5822 5793 2446 98 3 0 chr20 37612448 37612754 -34541128 - AluSc SINE Alu -2 307 1 4608 135 77 47 chr20 37612754 37613483 -34540399 - L1MA8 LINE L1 -498 5793 4978 1822 171 0 27 chr20 37613483 37613782 -34540100 - AluJo SINE Alu -21 291 1 4608 135 77 47 chr20 37613782 37613980 -34539902 - L1MA8 LINE L1 -1313 4978 4787 1063 106 0 20 chr20 37614079 37614230 -34539652 + AluJb SINE Alu 1 148 -164 2196 93 0 0 chr20 37614236 37614505 -34539377 - AluSg SINE Alu -41 269 1 680 159 0 0 chr20 37614517 37614630 -34539252 - FLAM_A SINE Alu -21 121 9 1863 155 3 14 chr20 37614696 37614987 -34538895 + AluJb SINE Alu 1 288 -24 23 0 0 0 chr20 37614994 37615017 -34538865 + AT_rich Low_complexity Low_complexity 1 23 0 2345 106 0 0 chr20 37615027 37615339 -34538543 - AluSx SINE Alu 0 312 1 278 352 19 0 chr20 37615392 37615497 -34538385 - L2 LINE L2 -2911 403 297 734 197 0 0 chr20 37615769 37615901 -34537981 + AluJo/FLAM SINE Alu 2 133 -179 423 100 143 0 chr20 37615901 37615971 -34537911 - AluY SINE Alu -17 294 215 1882 155 13 35 chr20 37615971 37616185 -34537697 + L1MB8 LINE L1 5568 5772 -406 2208 80 23 30 chr20 37616185 37616485 -34537397 + AluSq SINE Alu 1 298 -15 1882 155 13 35 chr20 37616485 37616644 -34537238 + L1MB8 LINE L1 5772 5933 -245 345 381 102 10 chr20 37616650 37617054 -34536828 + L2 LINE L2 781 1221 -2093 1088 251 18 11 chr20 37617119 37617394 -34536488 - MLT1C LTR MaLR -3 464 188 2375 105 3 0 chr20 37617410 37617714 -34536168 - AluSg SINE Alu -5 305 1 230 290 30 20 chr20 37617714 37617804 -34536078 + L2 LINE L2 2527 2620 -694 274 257 100 70 chr20 37617831 37617962 -34535920 - L2 LINE L2 -343 2971 2845 2585 62 0 0 chr20 37617962 37618267 -34535615 + AluY SINE Alu 1 305 -6 274 257 100 70 chr20 37618267 37618335 -34535547 - L2 LINE L2 -469 2845 2781 189 0 0 0 chr20 37618335 37618356 -34535526 + (TTTTA)n Simple_repeat Simple_repeat 1 21 0 274 257 100 70 chr20 37618356 37618418 -34535464 - L2 LINE L2 -533 2781 2661 2157 100 28 0 chr20 37618651 37618942 -34534940 + AluSx SINE Alu 14 312 0 230 167 33 50 chr20 37619554 37619614 -34534268 - MIR SINE MIR -11 251 193 475 241 163 14 chr20 37621467 37621608 -34532274 + MER5A DNA MER1_type 28 189 0 4489 176 53 9 chr20 37622385 37623201 -34530681 + MER21B LTR ERV1 1 852 -11 1903 81 231 191 chr20 37623680 37624239 -34529643 + LTR12 LTR ERV1 1 581 -133 22 0 0 0 chr20 37624312 37624334 -34529548 + AT_rich Low_complexity Low_complexity 1 22 0 598 258 0 20 chr20 37625104 37625255 -34528627 - L1ME3 LINE L1 -3 6159 6012 253 295 54 18 chr20 37625277 37625389 -34528493 - MIR3 SINE MIR -39 169 54 1363 151 137 7 chr20 37625389 37625674 -34528208 + MER33 DNA MER1_type 1 322 -2 425 258 93 33 chr20 37625703 37625854 -34528028 + L2 LINE L2 3154 3313 0 21 0 0 0 chr20 37625973 37625994 -34527888 + AT_rich Low_complexity Low_complexity 1 21 0 1994 76 4 4 chr20 37626063 37626348 -34527534 - AluY SINE Alu 0 317 33 1733 173 3 7 chr20 37626350 37626645 -34527237 - AluJb SINE Alu -17 295 2 1141 328 83 12 chr20 37626836 37627327 -34526555 + L3 LINE CR1 624 1149 -428 1702 177 18 0 chr20 37627407 37627714 -34526168 + AluJb SINE Alu 1 312 0 1002 176 12 24 chr20 37627818 37627983 -34525899 - FRAM SINE Alu -3 163 1 2129 116 10 0 chr20 37628106 37628398 -34525484 + AluSx SINE Alu 1 295 -17 2180 116 0 7 chr20 37628450 37628753 -34525129 + AluSx SINE Alu 1 301 -11 2279 117 0 3 chr20 37628800 37629100 -34524782 + AluSx SINE Alu 1 299 -13 248 342 71 71 chr20 37629573 37630026 -34523856 - L2 LINE L2 -4 3268 2816 627 162 20 0 chr20 37630218 37630317 -34523565 + Tigger3(Golem) DNA MER2_type 2 102 -2927 3399 130 112 60 chr20 37630320 37630377 -34523505 + Tigger3(Golem) DNA MER2_type 2287 2340 -689 1721 167 20 10 chr20 37630377 37630671 -34523211 - AluJo SINE Alu -15 297 1 3399 130 112 60 chr20 37630671 37630812 -34523070 + Tigger3(Golem) DNA MER2_type 2340 2472 -557 2168 113 24 0 chr20 37630812 37631103 -34522779 + AluSx SINE Alu 1 298 -14 3399 130 112 60 chr20 37631103 37631200 -34522682 + Tigger3(Golem) DNA MER2_type 2472 2562 -467 1771 183 3 7 chr20 37631200 37631495 -34522387 + AluJb SINE Alu 1 294 -18 3399 130 112 60 chr20 37631495 37631903 -34521979 + Tigger3(Golem) DNA MER2_type 2562 3029 0 2449 73 3 0 chr20 37632083 37632386 -34521496 - AluY SINE Alu -7 304 1 1337 125 19 5 chr20 37632471 37632687 -34521195 - MER6 DNA MER2_type -2 863 645 1309 198 0 8 chr20 37632696 37632933 -34520949 - MER6 DNA MER2_type -629 236 2 2017 145 0 16 chr20 37633576 37633880 -34520002 - AluJb SINE Alu -13 299 1 867 264 44 26 chr20 37634177 37634404 -34519478 - MIR SINE MIR -4 258 28 1961 151 16 13 chr20 37634794 37634930 -34518952 + AluJb SINE Alu 1 135 -177 2259 87 7 0 chr20 37634930 37635219 -34518663 + AluSx SINE Alu 1 291 -21 1961 151 16 13 chr20 37635219 37635393 -34518489 + AluJb SINE Alu 135 312 0 2343 97 0 7 chr20 37635763 37636072 -34517810 + AluSq SINE Alu 1 307 -6 2076 102 0 0 chr20 37636286 37636551 -34517331 - AluSq SINE Alu -48 265 1 227 287 101 36 chr20 37636923 37637055 -34516827 - MIR SINE MIR -62 146 27 189 236 0 55 chr20 37638470 37638525 -34515357 + L2 LINE L2 3210 3261 -11 300 303 106 0 chr20 37638647 37638779 -34515103 + MIR3 SINE MIR 59 204 -4 446 239 30 67 chr20 37638939 37639073 -34514809 + L2 LINE L2 2949 3077 -195 336 296 62 51 chr20 37639357 37639533 -34514349 + MIR SINE MIR 37 214 -48 349 303 27 0 chr20 37639785 37639908 -34513974 - L2 LINE L2 -221 3051 2929 2104 122 3 7 chr20 37640046 37640350 -34513532 - AluSx SINE Alu -9 303 1 198 150 0 0 chr20 37640393 37640433 -34513449 + (TG)n Simple_repeat Simple_repeat 2 41 0 352 168 148 50 chr20 37640499 37640600 -34513282 - MER112 DNA MER1_type -12 248 138 * 675 97 8 73 chr20 37640597 37640721 -34513161 + LTR9B LTR ERV1 445 560 -84 316 252 97 26 chr20 37640729 37640884 -34512998 - MER112 DNA MER1_type -83 177 12 357 364 41 5 chr20 37641743 37641938 -34511944 + L2 LINE L2 2844 3045 -227 22 0 0 0 chr20 37642510 37642532 -34511350 + AT_rich Low_complexity Low_complexity 1 22 0 273 290 0 29 chr20 37642920 37642989 -34510893 + L2 LINE L2 3107 3173 -99 2049 147 0 6 chr20 37643064 37643377 -34510505 + AluSx SINE Alu 1 311 -1 2343 105 0 0 chr20 37644507 37644813 -34509069 + AluSx SINE Alu 5 310 -2 622 236 50 7 chr20 37644828 37644968 -34508914 + MIR3 SINE MIR 38 183 -25 1905 171 0 3 chr20 37645168 37645477 -34508405 + AluJb SINE Alu 1 308 -4 775 275 20 59 chr20 37645946 37646215 -34507667 - MIR SINE MIR 0 262 6 466 288 84 28 chr20 37646230 37646445 -34507437 - MIR SINE MIR -6 256 30 531 291 108 25 chr20 37647223 37647464 -34506418 + MIR SINE MIR 2 262 0 692 129 147 0 chr20 37647922 37648038 -34505844 - FLAM_C SINE Alu 0 133 1 21 57 0 0 chr20 37648468 37648503 -34505379 + AT_rich Low_complexity Low_complexity 1 35 0 267 301 150 26 chr20 37648542 37648655 -34505227 + MIR SINE MIR 1 127 -135 2204 95 27 7 chr20 37649027 37649323 -34504559 - AluSx SINE Alu -10 302 1 213 39 0 0 chr20 37649387 37649413 -34504469 + (A)n Simple_repeat Simple_repeat 1 26 0 1491 164 30 56 chr20 37649415 37649719 -34504163 + AluJo SINE Alu 1 296 -16 2381 92 10 7 chr20 37649721 37650027 -34503855 + AluSg SINE Alu 1 307 -3 1674 153 3 47 chr20 37650271 37650572 -34503310 + AluSx SINE Alu 1 288 -24 264 265 51 31 chr20 37650873 37650971 -34502911 + L1ME LINE L1 5531 5630 -491 21 36 0 0 chr20 37651005 37651033 -34502849 + AT_rich Low_complexity Low_complexity 1 28 0 2195 109 0 29 chr20 37651088 37651399 -34502483 + AluSx SINE Alu 1 302 -10 732 181 0 31 chr20 37651580 37651707 -34502175 + FLAM_A SINE Alu 1 123 -10 318 206 0 0 chr20 37652587 37652650 -34501232 + L1ME3 LINE L1 6098 6160 -2 2344 207 29 92 chr20 37653243 37653360 -34500522 + L1M4 LINE L1 3075 3198 -2948 1848 160 16 10 chr20 37653360 37653667 -34500215 + AluJb SINE Alu 1 309 -3 2344 207 29 92 chr20 37653667 37653735 -34500147 + L1M4 LINE L1 3198 3269 -2877 2102 88 18 0 chr20 37653735 37654009 -34499873 + AluSx SINE Alu 14 292 -20 2344 207 29 92 chr20 37654009 37654374 -34499508 + L1M4 LINE L1 3269 3555 -2591 2174 96 45 0 chr20 37654374 37654695 -34499187 + AluSc SINE Alu 1 309 0 2344 207 29 92 chr20 37654695 37655003 -34498879 + L1M4 LINE L1 3555 3881 -2265 490 246 25 17 chr20 37655197 37655315 -34498567 - L2 LINE L2 -5 3308 3190 2266 73 0 57 chr20 37656023 37656337 -34497545 + AluSg SINE Alu 1 296 -14 855 263 177 28 chr20 37656337 37656733 -34497149 - L3 LINE CR1 -20 1557 1103 2107 115 0 7 chr20 37657213 37657534 -34496348 + AluSx SINE Alu 1 319 0 1128 190 77 9 chr20 37658470 37658691 -34495191 - MER46A DNA MER2_type 0 236 1 949 122 0 186 chr20 37659261 37659498 -34494384 - 7SK RNA RNA 0 193 1 1669 149 0 118 chr20 37659801 37660130 -34493752 - AluJo SINE Alu -10 292 3 2571 48 10 3 chr20 37660192 37660501 -34493381 - AluY SINE Alu 0 311 1 826 156 12 75 chr20 37661115 37661275 -34492607 + FRAM SINE Alu 5 154 -12 1525 181 4 7 chr20 37661285 37661555 -34492327 + AluJo SINE Alu 27 295 -17 322 177 13 63 chr20 37661564 37661643 -34492239 + MIR SINE MIR 67 141 -67 317 254 0 0 chr20 37661971 37662034 -34491848 + L2 LINE L2 3250 3312 -1 1663 180 3 26 chr20 37662050 37662355 -34491527 + AluJo SINE Alu 1 298 -14 2230 116 10 3 chr20 37662378 37662688 -34491194 + AluSx SINE Alu 1 312 0 215 219 219 0 chr20 37662874 37662947 -34490935 + MIR SINE MIR 161 249 -13 1671 158 3 58 chr20 37663181 37663511 -34490371 - AluJb SINE Alu 0 312 1 1072 182 27 31 chr20 37663523 37663748 -34490134 - L1MC1 LINE L1 0 6333 6110 2110 123 0 28 chr20 37664686 37665004 -34488878 + AluSx SINE Alu 1 309 -3 189 325 87 79 chr20 37665069 37665195 -34488687 + L2 LINE L2 3126 3252 -20 348 293 8 24 chr20 37665226 37665349 -34488533 + L3b LINE CR1 1112 1232 -351 416 281 0 0 chr20 37665380 37665476 -34488406 - MIR3 SINE MIR -24 184 89 239 321 37 43 chr20 37665570 37665671 -34488211 - MIR SINE MIR 0 262 162 2055 126 13 7 chr20 37665671 37665973 -34487909 - AluSx SINE Alu -8 304 1 1753 165 47 3 chr20 37665979 37666276 -34487606 - AluJo SINE Alu 0 312 3 239 321 37 43 chr20 37666276 37666329 -34487553 - MIR SINE MIR -105 157 102 1538 171 127 109 chr20 37666425 37666483 -34487399 + L1MC4a LINE L1 6675 6731 -1077 2248 109 3 6 chr20 37666483 37666794 -34487088 + AluSx SINE Alu 1 310 -2 1538 171 127 109 chr20 37666794 37667019 -34486863 + L1MC4a LINE L1 6731 6951 -857 1778 106 4 4 chr20 37667019 37667293 -34486589 + AluSg SINE Alu 37 310 0 1538 171 127 109 chr20 37667293 37667340 -34486542 + L1MC4a LINE L1 6951 6996 -812 216 67 0 0 chr20 37667340 37667370 -34486512 + (TAAA)n Simple_repeat Simple_repeat 4 33 0 1538 171 127 109 chr20 37667370 37667493 -34486389 + L1MC4a LINE L1 6996 7139 -669 * 2381 135 89 61 chr20 37667489 37667844 -34486038 + L1MB2 LINE L1 5604 5980 -191 2301 88 14 0 chr20 37667844 37668138 -34485744 + AluSx SINE Alu 1 298 -14 2381 135 89 61 chr20 37668138 37668309 -34485573 + L1MB2 LINE L1 5980 6145 -26 2307 174 92 96 chr20 37668322 37668621 -34485261 + L1MC4a LINE L1 7126 7425 -383 2068 133 7 0 chr20 37668621 37668921 -34484961 + AluSx SINE Alu 9 310 -2 2307 174 92 96 chr20 37668921 37669039 -34484843 + L1MC4a LINE L1 7425 7542 -266 1785 150 6 45 chr20 37669039 37669352 -34484530 + AluSx SINE Alu 1 301 -11 2307 174 92 96 chr20 37669352 37669619 -34484263 + L1MC4a LINE L1 7542 7808 0 444 336 22 22 chr20 37669694 37669926 -34483956 - L3 LINE CR1 -5 1572 1341 296 253 40 13 chr20 37670100 37670175 -34483707 + L2 LINE L2 3227 3303 -10 244 254 60 0 chr20 37670360 37670427 -34483455 - L2 LINE L2 -1 3271 3201 25 0 0 0 chr20 37670507 37670532 -34483350 + AT_rich Low_complexity Low_complexity 1 25 0 234 161 18 89 chr20 37670822 37670878 -34483004 + L1ME LINE L1 5529 5580 -590 492 72 0 0 chr20 37671163 37671232 -34482650 + (CA)n Simple_repeat Simple_repeat 2 70 0 1195 215 35 92 chr20 37671973 37672341 -34481541 + MER21B LTR ERV1 1 347 -516 2147 236 82 33 chr20 37672369 37672999 -34480883 - MER21B LTR ERV1 -60 803 143 602 157 28 19 chr20 37673053 37673161 -34480721 + FLAM_C SINE Alu 17 125 -18 25 0 0 0 chr20 37673194 37673219 -34480663 + AT_rich Low_complexity Low_complexity 1 25 0 428 133 78 78 chr20 37673230 37673320 -34480562 - MER21B LTR ERV1 -773 90 1 2101 158 0 0 chr20 37673678 37673982 -34479900 - AluSx SINE Alu -8 304 1 1010 155 6 39 chr20 37673989 37674170 -34479712 - FAM SINE Alu 0 175 1 397 174 14 0 chr20 37674672 37674741 -34479141 - MER2 DNA MER2_type 0 345 276 1255 108 5 16 chr20 37674742 37674928 -34478954 + AluSg/x SINE Alu 129 312 0 2554 61 7 3 chr20 37674931 37675241 -34478641 + AluY SINE Alu 1 311 0 1389 176 52 4 chr20 37675243 37675510 -34478372 - MER2 DNA MER2_type -65 280 1 197 281 146 0 chr20 37675511 37675600 -34478282 + MIR SINE MIR 32 133 -75 866 251 48 4 chr20 37675603 37675834 -34478048 - MIR SINE MIR 0 262 22 261 258 91 0 chr20 37675828 37675894 -34477988 + MIR3 SINE MIR 126 197 -11 * 371 244 104 0 chr20 37676724 37676839 -34477043 + MIR SINE MIR 57 183 -79 2286 98 3 7 chr20 37677268 37677575 -34476307 + AluSx SINE Alu 1 306 -6 2222 122 0 0 chr20 37677620 37677915 -34475967 - AluSx SINE Alu -12 300 6 2579 63 0 0 chr20 37678186 37678489 -34475393 - AluY SINE Alu -8 303 1 3048 203 26 3 chr20 37678720 37679335 -34474547 + MER82 DNA MER2_type 24 652 -1 2540 76 3 0 chr20 37679353 37679655 -34474227 - AluSp SINE Alu -10 303 1 2056 121 3 29 chr20 37679855 37679991 -34473891 + AluSx SINE Alu 1 139 -173 2490 56 0 0 chr20 37679991 37680302 -34473580 + AluY SINE Alu 1 311 0 194 0 39 0 chr20 37680302 37680328 -34473554 + (TA)n Simple_repeat Simple_repeat 1 27 0 2056 121 3 29 chr20 37680328 37680495 -34473387 + AluSx SINE Alu 137 298 -14 1925 118 0 7 chr20 37680500 37680770 -34473112 + AluSx SINE Alu 31 298 -14 989 211 176 9 chr20 37680851 37681187 -34472695 + L1MC4 LINE L1 6462 6853 -1189 4378 40 0 24 chr20 37681226 37681641 -34472241 + L1PA5 LINE L1 5622 6022 -132 2416 56 0 43 chr20 37681641 37681785 -34472097 + AluY SINE Alu 1 127 -184 2429 45 42 3 chr20 37681785 37682074 -34471808 + AluY SINE Alu 1 300 -11 2416 56 0 43 chr20 37682074 37682233 -34471649 + AluY SINE Alu 127 291 -20 4378 40 0 24 chr20 37682233 37682360 -34471522 + L1PA5 LINE L1 6022 6151 -3 4865 189 91 74 chr20 37682385 37683289 -34470593 + L1MB3 LINE L1 335 1222 -5424 2040 74 0 0 chr20 37683289 37683532 -34470350 + AluSq SINE Alu 1 243 -70 4865 189 91 74 chr20 37683532 37684673 -34469209 + L1MB3 LINE L1 1222 2487 -4159 892 252 59 0 chr20 37684680 37684826 -34469056 + L1MB3 LINE L1 5471 5607 -1037 2094 140 6 19 chr20 37684826 37685141 -34468741 + AluSx SINE Alu 1 311 -1 892 252 59 0 chr20 37685141 37685284 -34468598 + L1MB3 LINE L1 5607 5777 -867 1019 126 0 0 chr20 37685285 37685420 -34468462 + AluSq/x SINE Alu 2 136 -177 2297 102 3 0 chr20 37685421 37685715 -34468167 + AluSp SINE Alu 1 295 -18 1213 179 5 5 chr20 37685716 37685827 -34468055 + L1MB3 LINE L1 5879 5989 -692 1847 193 3 0 chr20 37685827 37686138 -34467744 + AluJo SINE Alu 1 312 0 1213 179 5 5 chr20 37686138 37686249 -34467633 + L1MB3 LINE L1 5988 6101 -580 2001 148 3 10 chr20 37686251 37686556 -34467326 + AluJo SINE Alu 1 303 -9 1970 136 20 31 chr20 37686556 37686867 -34467015 + L1MB3 LINE L1 6326 6634 -47 2374 100 0 3 chr20 37686867 37687167 -34466715 + AluSq SINE Alu 1 299 -14 1970 136 20 31 chr20 37687167 37687208 -34466674 + L1MB3 LINE L1 6634 6674 -7 2239 112 3 0 chr20 37687490 37687786 -34466096 - AluSq SINE Alu -16 297 1 497 221 121 21 chr20 37687792 37687932 -34465950 + MIR SINE MIR 107 260 -2 2329 106 0 0 chr20 37687932 37688234 -34465648 + AluSg SINE Alu 1 302 -8 1176 119 6 17 chr20 37688234 37688410 -34465472 + AluSg/x SINE Alu 134 307 -5 198 0 0 0 chr20 37688436 37688458 -34465424 + (A)n Simple_repeat Simple_repeat 1 22 0 400 314 51 0 chr20 37688990 37689108 -34464774 - L2 LINE L2 0 3313 3190 471 247 123 19 chr20 37689170 37689332 -34464550 - MIR3 SINE MIR -15 193 15 2084 49 111 28 chr20 37690040 37690328 -34463554 + AluSx SINE Alu 1 312 0 2385 82 3 10 chr20 37690516 37690819 -34463063 + AluSx SINE Alu 1 301 -11 310 287 64 0 chr20 37691114 37691208 -34462674 - L2 LINE L2 -235 3078 2979 22 0 0 0 chr20 37691221 37691243 -34462639 + AT_rich Low_complexity Low_complexity 1 22 0 4623 134 77 47 chr20 37691245 37691289 -34462593 - L1MA8 LINE L1 -2 6289 6248 2302 114 3 0 chr20 37691289 37691596 -34462286 - AluSq SINE Alu -1 312 5 4623 134 77 47 chr20 37691596 37691772 -34462110 - L1MA8 LINE L1 -43 6248 6079 2222 61 8 0 chr20 37691772 37692035 -34461847 - AluSp SINE Alu -14 299 35 4623 134 77 47 chr20 37692035 37692249 -34461633 - L1MA8 LINE L1 -212 6079 5873 2279 119 7 0 chr20 37692249 37692552 -34461330 - AluSp SINE Alu -8 305 1 4623 134 77 47 chr20 37692552 37692606 -34461276 - L1MA8 LINE L1 -418 5873 5822 2196 135 0 0 chr20 37692606 37692902 -34460980 - AluSx SINE Alu -16 296 1 4623 134 77 47 chr20 37692902 37692933 -34460949 - L1MA8 LINE L1 -469 5822 5793 2441 98 3 0 chr20 37692933 37693239 -34460643 - AluSc SINE Alu -2 307 1 4623 134 77 47 chr20 37693239 37693968 -34459914 - L1MA8 LINE L1 -498 5793 4978 1820 171 0 27 chr20 37693968 37694267 -34459615 - AluJo SINE Alu -21 291 1 4623 134 77 47 chr20 37694267 37694465 -34459417 - L1MA8 LINE L1 -1313 4978 4787 1059 106 0 20 chr20 37694564 37694715 -34459167 + AluJb SINE Alu 1 148 -164 2181 93 0 0 chr20 37694721 37694990 -34458892 - AluSg SINE Alu -41 269 1 727 159 0 0 chr20 37695002 37695115 -34458767 - FLAM_A SINE Alu -21 121 9 1848 155 3 14 chr20 37695181 37695472 -34458410 + AluJb SINE Alu 1 288 -24 23 0 0 0 chr20 37695479 37695502 -34458380 + AT_rich Low_complexity Low_complexity 1 23 0 2324 106 0 0 chr20 37695512 37695824 -34458058 - AluSx SINE Alu 0 312 1 297 352 19 0 chr20 37695877 37695982 -34457900 - L2 LINE L2 -2911 403 297 786 197 0 0 chr20 37696254 37696386 -34457496 + AluJo/FLAM SINE Alu 2 133 -179 453 100 143 0 chr20 37696386 37696456 -34457426 - AluY SINE Alu -17 294 215 1880 155 13 35 chr20 37696456 37696670 -34457212 + L1MB8 LINE L1 5568 5772 -406 2196 80 23 30 chr20 37696670 37696970 -34456912 + AluSq SINE Alu 1 298 -15 1880 155 13 35 chr20 37696970 37697129 -34456753 + L1MB8 LINE L1 5772 5933 -245 384 352 120 26 chr20 37697135 37697553 -34456329 + L2 LINE L2 781 1237 -2077 1049 251 18 11 chr20 37697604 37697879 -34456003 - MLT1C LTR MaLR -3 464 188 2371 105 3 0 chr20 37697895 37698199 -34455683 - AluSg SINE Alu -5 305 1 247 290 30 20 chr20 37698199 37698289 -34455593 + L2 LINE L2 2527 2620 -694 326 256 90 77 chr20 37698300 37698447 -34455435 - L2 LINE L2 -317 2996 2852 2572 62 0 0 chr20 37698447 37698752 -34455130 + AluY SINE Alu 1 305 -6 326 256 90 77 chr20 37698752 37698820 -34455062 - L2 LINE L2 -461 2852 2786 189 0 0 0 chr20 37698820 37698841 -34455041 + (TTTTA)n Simple_repeat Simple_repeat 1 21 0 326 256 90 77 chr20 37698841 37698903 -34454979 - L2 LINE L2 -527 2786 2661 2216 88 0 69 chr20 37699356 37699674 -34454208 - AluSx SINE Alu -16 296 1 1778 178 7 3 chr20 37699681 37699973 -34453909 - AluJo SINE Alu -19 293 1 2222 130 0 0 chr20 37699984 37700284 -34453598 - AluSx SINE Alu -12 300 1 2342 117 3 0 chr20 37700546 37700854 -34453028 + AluSx SINE Alu 1 309 -3 1605 150 49 0 chr20 37701281 37701527 -34452355 - AluSx SINE Alu -24 288 31 1509 164 4 16 chr20 37701527 37701776 -34452106 + AluJo SINE Alu 51 297 -15 2290 118 0 6 chr20 37701779 37702094 -34451788 + AluSq SINE Alu 1 313 0 182 349 0 16 chr20 37702103 37702166 -34451716 + L2 LINE L2 3121 3182 -90 1592 141 18 14 chr20 37702249 37702526 -34451356 + L1MB2 LINE L1 5894 6171 0 2381 108 0 0 chr20 37702671 37702978 -34450904 + AluSq SINE Alu 1 307 -6 23 33 0 0 chr20 37703149 37703179 -34450703 + AT_rich Low_complexity Low_complexity 1 30 0 1725 203 7 45 chr20 37703511 37703692 -34450190 + MSTD LTR MaLR 1 187 -209 2125 89 7 18 chr20 37703692 37704002 -34449880 - AluSg SINE Alu 0 307 1 1725 203 7 45 chr20 37704002 37704239 -34449643 + MSTD LTR MaLR 187 396 0 185 246 53 35 chr20 37704248 37704305 -34449577 + L2 LINE L2 2991 3048 -224 1179 178 66 0 chr20 37704413 37704626 -34449256 - AluJo SINE Alu 0 312 86 2194 124 0 0 chr20 37704628 37704927 -34448955 - AluSx SINE Alu -13 299 1 2428 101 0 0 chr20 37704936 37705242 -34448640 - AluY SINE Alu -5 306 1 691 268 19 19 chr20 37705332 37705537 -34448345 - MIR SINE MIR -30 232 28 188 281 18 18 chr20 37705549 37705606 -34448276 - MIR3 SINE MIR -17 191 135 2159 135 3 6 chr20 37705691 37706002 -34447880 - AluSx SINE Alu -2 310 1 1876 162 0 17 chr20 37706004 37706301 -34447581 - AluJb SINE Alu -16 296 5 442 196 62 10 chr20 37706419 37706516 -34447366 + MIR SINE MIR 128 229 -33 614 280 149 90 chr20 37706568 37706632 -34447250 - L3 LINE CR1 -255 1322 1263 2268 90 28 0 chr20 37706632 37706922 -34446960 - AluSg SINE Alu -12 298 1 614 280 149 90 chr20 37706922 37707414 -34446468 - L3 LINE CR1 -314 1263 733 210 253 160 0 chr20 37707434 37707509 -34446373 + MIR SINE MIR 166 252 -10 262 197 106 45 chr20 37707530 37707596 -34446286 + L2 LINE L2 3244 3313 0 612 237 0 53 chr20 37707664 37707816 -34446066 - MIR SINE MIR -111 151 8 2155 132 0 13 chr20 37708194 37708504 -34445378 + AluSx SINE Alu 1 306 -6 1432 163 93 57 chr20 37708511 37708812 -34445070 + AluJo SINE Alu 1 312 0 257 240 0 0 chr20 37708838 37708888 -34444994 + MIR SINE MIR 101 150 -58 464 277 103 71 chr20 37708934 37709158 -34444724 - MIR SINE MIR -1 261 31 2151 141 0 3 chr20 37712849 37713162 -34440720 + AluJb SINE Alu 1 312 0 238 298 0 0 chr20 37713186 37713243 -34440639 - MIR SINE MIR -67 141 85 428 167 0 98 chr20 37713293 37713395 -34440487 - MIR SINE MIR -85 123 32 358 361 0 0 chr20 37713589 37713747 -34440135 + (TG)n Simple_repeat Simple_repeat 1 158 0 391 257 43 14 chr20 37714088 37714228 -34439654 - MIR3 SINE MIR -6 202 59 447 269 23 23 chr20 37714308 37714438 -34439444 - MIR3 SINE MIR -5 203 74 350 263 125 31 chr20 37714643 37714803 -34439079 + MIR3 SINE MIR 16 190 -18 192 77 0 0 chr20 37715708 37715734 -34438148 + (CAG)n Simple_repeat Simple_repeat 2 27 0 309 26 0 0 chr20 37716039 37716077 -34437805 + (CA)n Simple_repeat Simple_repeat 1 38 0 582 99 0 0 chr20 37716502 37716593 -34437289 + (TG)n Simple_repeat Simple_repeat 2 92 0 2321 69 35 0 chr20 37716916 37717205 -34436677 - AluY SINE Alu -11 300 2 329 359 14 21 chr20 37717368 37717510 -34436372 + L2 LINE L2 2944 3084 -188 2220 119 0 0 chr20 37717585 37717878 -34436004 - AluSx SINE Alu -1 311 19 252 61 0 0 chr20 37717878 37717911 -34435971 + AluYa5 SINE Alu 112 144 -157 538 178 0 0 chr20 37717911 37718012 -34435870 + AluSg/x SINE Alu 206 306 -3 26 0 0 0 chr20 37718012 37718038 -34435844 + AT_rich Low_complexity Low_complexity 1 26 0 360 298 128 21 chr20 37718440 37718581 -34435301 + L2 LINE L2 3117 3272 0 253 397 0 13 chr20 37718617 37718695 -34435187 + L2 LINE L2 3106 3182 -90 567 268 95 12 chr20 37718778 37718946 -34434936 + MIR SINE MIR 15 196 -66 1021 95 0 15 chr20 37718951 37719088 -34434794 + AluY SINE Alu 1 135 -176 2365 97 0 3 chr20 37719134 37719432 -34434450 - AluSc SINE Alu -12 297 1 1776 156 87 0 chr20 37719544 37719820 -34434062 - AluJb SINE Alu -12 300 1 1881 100 4 0 chr20 37719829 37720070 -34433812 - AluSx SINE Alu -15 297 56 282 157 0 0 chr20 37720142 37720193 -34433689 - AluSx SINE Alu -252 51 1 2166 104 7 29 chr20 37720217 37720525 -34433357 - AluSx SINE Alu -11 301 1 180 291 0 0 chr20 37720525 37720580 -34433302 - MIR SINE MIR -56 152 98 2276 95 3 0 chr20 37721181 37721490 -34432392 - AluSx SINE Alu 0 310 1 273 296 139 13 chr20 37721655 37721755 -34432127 + MIR SINE MIR 4 115 -93 1263 240 108 42 chr20 37721767 37722254 -34431628 - L2 LINE L2 -8 3305 2783 2302 108 0 3 chr20 37722263 37722568 -34431314 - AluSg SINE Alu -2 308 5 1093 90 0 35 chr20 37722568 37722713 -34431169 - AluSq/x SINE Alu -173 140 1 235 227 0 45 chr20 37722713 37722779 -34431103 - L2 LINE L2 -536 2778 2716 * 535 266 15 9 chr20 37722764 37722913 -34430969 + MIR SINE MIR 15 164 -63 1122 143 4 127 chr20 37722940 37723062 -34430820 + AluJo SINE Alu 13 148 -164 2278 112 0 3 chr20 37723062 37723365 -34430517 + AluSg SINE Alu 1 302 -8 2435 87 6 3 chr20 37723367 37723679 -34430203 + AluSp SINE Alu 1 313 0 1122 143 4 127 chr20 37723679 37723790 -34430092 + AluJo SINE Alu 149 220 -92 192 283 104 28 chr20 37723689 37723705 -34430177 + MIR SINE MIR 136 149 -113 * 2183 105 0 7 chr20 37723705 37724011 -34429871 + AluSq SINE Alu 1 304 -9 192 283 104 28 chr20 37724011 37724100 -34429782 + MIR SINE MIR 149 249 -13 1125 150 0 0 chr20 37724105 37724285 -34429597 - FRAM SINE Alu 0 176 1 180 0 0 0 chr20 37724296 37724316 -34429566 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 458 304 30 7 chr20 37724333 37724468 -34429414 - MIR SINE MIR -105 157 20 513 59 0 0 chr20 37724661 37724729 -34429153 - L1PA5 LINE L1 -1 6153 6086 1848 47 0 17 chr20 37724729 37724961 -34428921 - L1PA5 LINE L1 0 6154 5927 302 54 0 0 chr20 37724962 37724999 -34428883 + L1PA5 LINE L1 5912 5948 -207 28 48 0 0 chr20 37725270 37725312 -34428570 + AT_rich Low_complexity Low_complexity 1 42 0 869 150 0 0 chr20 37725512 37725645 -34428237 + FLAM_C SINE Alu 1 133 0 314 205 0 51 chr20 37725690 37725768 -34428114 - L1ME4a LINE L1 -7 6114 6041 337 273 30 0 chr20 37725923 37726022 -34427860 - MIR SINE MIR -84 178 77 34 24 0 0 chr20 37726069 37726110 -34427772 + AT_rich Low_complexity Low_complexity 1 41 0 1953 129 27 0 chr20 37726128 37726423 -34427459 - AluSx SINE Alu -9 303 1 748 194 0 0 chr20 37726823 37726947 -34426935 - FLAM_A SINE Alu -9 124 1 1136 131 0 6 chr20 37726961 37727136 -34426746 - AluJb SINE Alu -18 294 121 295 289 84 68 chr20 37727188 37727378 -34426504 + L2 LINE L2 3121 3313 0 1654 180 0 16 chr20 37727387 37727698 -34426184 + AluJo SINE Alu 7 312 0 1984 113 10 10 chr20 37727700 37728000 -34425882 + AluSx SINE Alu 1 300 -12 198 0 0 0 chr20 37728722 37728744 -34425138 + (A)n Simple_repeat Simple_repeat 1 22 0 309 89 0 0 chr20 37728744 37728789 -34425093 + (TA)n Simple_repeat Simple_repeat 2 46 0 23 0 0 0 chr20 37728823 37728846 -34425036 + AT_rich Low_complexity Low_complexity 1 23 0 827 125 0 8 chr20 37729252 37729380 -34424502 - AluJb SINE Alu -3 309 183 880 142 0 0 chr20 37729380 37729514 -34424368 - FLAM_C SINE Alu -9 134 1 1671 156 34 7 chr20 37729572 37729841 -34424041 + MER1B DNA MER1_type 1 276 -63 185 326 0 0 chr20 37729971 37730017 -34423865 + L2 LINE L2 3268 3313 0 2229 86 3 0 chr20 37730111 37730402 -34423480 - AluSp SINE Alu -21 292 1 862 309 148 14 chr20 37730485 37730648 -34423234 - L2 LINE L2 0 3313 3173 2243 78 0 3 chr20 37730648 37730944 -34422938 + AluY SINE Alu 1 295 -16 862 309 148 14 chr20 37730944 37731139 -34422743 - L2 LINE L2 -140 3173 2907 381 263 114 18 chr20 37731503 37731617 -34422265 - L2 LINE L2 0 3272 3148 398 275 138 6 chr20 37731617 37731784 -34422098 + MER5A DNA MER1_type 1 189 0 2429 47 0 7 chr20 37731852 37732150 -34421732 + AluSc SINE Alu 1 296 -13 2377 57 3 0 chr20 37733577 37733875 -34420007 - AluSp SINE Alu -14 299 1 535 226 22 44 chr20 37733880 37734017 -34419865 - MIR SINE MIR -70 192 59 216 291 76 13 chr20 37734367 37734446 -34419436 + MIR SINE MIR 1 84 -178 1931 125 14 3 chr20 37734467 37734762 -34419120 - AluSx SINE Alu -14 298 1 273 353 23 58 chr20 37734864 37735037 -34418845 - L2 LINE L2 -22 3291 3125 1293 145 55 4 chr20 37735053 37735288 -34418594 - AluJo SINE Alu -10 302 56 1270 146 0 10 chr20 37735288 37735494 -34418388 + AluSg/x SINE Alu 92 295 -15 459 228 101 7 chr20 37735495 37735644 -34418238 - L2 LINE L2 -1118 2196 2034 189 358 125 0 chr20 37736018 37736138 -34417744 + L2 LINE L2 3138 3272 0 500 145 222 0 chr20 37736523 37736640 -34417242 - L1MC3 LINE L1 0 7785 7643 811 104 0 123 chr20 37736648 37736811 -34417071 - FLAM_C SINE Alu 0 143 1 390 250 115 0 chr20 37736863 37736959 -34416923 + MIR3 SINE MIR 98 204 -4 25 51 0 0 chr20 37736965 37737004 -34416878 + AT_rich Low_complexity Low_complexity 1 39 0 353 78 0 223 chr20 37737127 37737180 -34416702 - MER116 DNA Mariner 0 80 59 1211 206 35 14 chr20 37737180 37737462 -34416420 + AluJo SINE Alu 1 288 -24 353 78 0 223 chr20 37737462 37737511 -34416371 - MER116 DNA Mariner -21 59 1 348 213 0 0 chr20 37738132 37738193 -34415689 - Charlie8 DNA MER1_type -2155 262 202 260 243 81 14 chr20 37738168 37738242 -34415640 - Charlie8 DNA MER1_type -2129 288 210 * 765 237 29 24 chr20 37738235 37738442 -34415440 - Charlie8 DNA MER1_type -2168 249 42 273 315 11 0 chr20 37739010 37739102 -34414780 - MIR SINE MIR -96 112 20 540 242 25 125 chr20 37739277 37739517 -34414365 + MIR SINE MIR 37 252 -10 251 194 290 0 chr20 37739672 37739734 -34414148 - L2 LINE L2 -4 3268 3189 289 283 26 35 chr20 37739796 37739909 -34413973 - MER103 DNA DNA -1 165 54 191 125 181 56 chr20 37740372 37740444 -34413438 - MIR SINE MIR -46 216 136 959 181 0 0 chr20 37740450 37740610 -34413272 - AluJb SINE Alu -20 292 133 225 0 0 0 chr20 37740725 37740750 -34413132 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 2164 112 0 0 chr20 37740801 37741097 -34412785 + AluSx SINE Alu 1 296 -16 385 158 79 40 chr20 37741821 37741896 -34411986 + Tigger5 DNA MER2_type 1 78 -2245 251 217 0 0 chr20 37741896 37741942 -34411940 - Tigger5 DNA MER2_type -3 2320 2275 1435 167 53 28 chr20 37741952 37742278 -34411604 - AluJo SINE Alu 0 333 1 2187 99 7 3 chr20 37742321 37742623 -34411259 + AluSg SINE Alu 1 303 -7 360 213 80 0 chr20 37742636 37742711 -34411171 + Tigger5 DNA MER2_type 2242 2322 -1 290 256 15 131 chr20 37742724 37742818 -34411064 - MIR SINE MIR -75 187 112 2196 122 0 0 chr20 37742818 37743129 -34410753 + AluSx SINE Alu 1 311 -1 290 256 15 131 chr20 37743129 37743171 -34410711 - MIR SINE MIR -150 112 67 406 271 32 78 chr20 37745479 37745625 -34408257 + L2 LINE L2 2871 3005 -267 2087 108 3 14 chr20 37745625 37745922 -34407960 - AluSx SINE Alu -10 302 9 406 271 32 78 chr20 37745922 37745993 -34407889 + L2 LINE L2 3005 3078 -194 193 282 0 99 chr20 37746306 37746356 -34407526 + L2 LINE L2 3244 3287 -26 1762 159 7 7 chr20 37746356 37746657 -34407225 - AluJo SINE Alu -11 301 1 193 282 0 99 chr20 37746657 37746677 -34407205 + L2 LINE L2 3287 3307 -6 1294 114 89 51 chr20 37746763 37746999 -34406883 + AluJo SINE Alu 55 299 -13 201 74 0 0 chr20 37747476 37747503 -34406379 + (TTGGGG)n Simple_repeat Simple_repeat 6 32 0 198 235 147 0 chr20 37747829 37747897 -34405985 - L2 LINE L2 0 3313 3236 677 272 131 87 chr20 37747931 37748149 -34405733 + L3 LINE CR1 1088 1295 -282 2146 97 0 10 chr20 37748149 37748448 -34405434 + AluSp SINE Alu 1 296 -17 677 272 131 87 chr20 37748448 37748641 -34405241 + L3 LINE CR1 1295 1517 -60 748 268 95 13 chr20 37748945 37749176 -34404706 - Charlie8 DNA MER1_type -2137 280 31 469 284 197 10 chr20 37749337 37749545 -34404337 - MIR SINE MIR 0 262 16 244 239 159 11 chr20 37751913 37752001 -34401881 - L2 LINE L2 -15 3298 3198 295 287 72 21 chr20 37752376 37752552 -34401330 + MIR SINE MIR 20 250 -12 407 204 83 30 chr20 37752716 37752832 -34401050 + FRAM SINE Alu 1 99 -67 667 252 71 24 chr20 37752847 37753101 -34400781 - L1MC4a LINE L1 -1736 6072 5807 243 357 45 15 chr20 37753652 37753851 -34400031 + L2 LINE L2 2866 3070 -202 1878 130 3 43 chr20 37754542 37754697 -34399185 - AluSx SINE Alu -23 289 150 2110 116 3 0 chr20 37754697 37754991 -34398891 - AluSq SINE Alu -18 295 1 1878 130 3 43 chr20 37754991 37755136 -34398746 - AluSx SINE Alu -162 150 1 210 304 96 40 chr20 37755278 37755403 -34398479 + L2 LINE L2 3163 3294 -19 246 216 159 11 chr20 37755819 37755907 -34397975 - HAL1b LINE L1 -11 1337 1237 2201 89 10 0 chr20 37755966 37756259 -34397623 + AluSg SINE Alu 1 296 -14 494 298 60 13 chr20 37756368 37756519 -34397363 + L2 LINE L2 3115 3272 0 360 263 0 0 chr20 37757955 37758035 -34395847 + MIR SINE MIR 183 262 0 542 299 103 93 chr20 37758166 37758261 -34395621 - L1MEc LINE L1 -4102 2208 2115 2031 108 23 10 chr20 37758261 37758567 -34395315 - AluSg SINE Alu 0 310 1 542 299 103 93 chr20 37758567 37758817 -34395065 - L1MEc LINE L1 -4195 2115 1869 1763 145 17 14 chr20 37758817 37759113 -34394769 + AluJb SINE Alu 1 297 -15 542 299 103 93 chr20 37759113 37759375 -34394507 - L1MEc LINE L1 -4441 1869 1611 1902 153 10 3 chr20 37759375 37759682 -34394200 - AluJb SINE Alu -3 309 1 542 299 103 93 chr20 37759682 37759730 -34394152 - L1MEc LINE L1 -4699 1611 1565 522 0 0 0 chr20 37759730 37759788 -34394094 + (TAGA)n Simple_repeat Simple_repeat 4 61 0 542 299 103 93 chr20 37759788 37759848 -34394034 - L1MEc LINE L1 -4745 1565 1483 2239 71 3 29 chr20 37759909 37760220 -34393662 - AluY SINE Alu -8 303 1 2022 121 6 16 chr20 37760226 37760540 -34393342 - AluSx SINE Alu 0 312 2 277 284 11 21 chr20 37760578 37760673 -34393209 - L1MEc LINE L1 -4871 1248 1155 22 56 0 0 chr20 37760684 37760720 -34393162 + AT_rich Low_complexity Low_complexity 1 36 0 2236 98 3 0 chr20 37760720 37761017 -34392865 + AluSp SINE Alu 1 298 -15 1547 141 15 78 chr20 37761019 37761352 -34392530 - AluJo SINE Alu 0 312 1 860 225 49 63 chr20 37761352 37761841 -34392041 - L1MEc LINE L1 -4957 1162 681 228 135 0 0 chr20 37761848 37761885 -34391997 + (T)n Simple_repeat Simple_repeat 1 37 0 588 279 125 14 chr20 37761913 37762121 -34391761 - L1MEc LINE L1 -5448 671 441 816 181 0 0 chr20 37762296 37762429 -34391453 - FLAM_A SINE Alu 0 133 1 1226 204 110 33 chr20 37762429 37762641 -34391241 - MER58B DNA MER1_type -2096 324 130 729 116 116 16 chr20 37762641 37762762 -34391120 + FLAM_C SINE Alu 1 133 0 2230 94 3 10 chr20 37762772 37763080 -34390802 + AluSx SINE Alu 1 306 -6 1226 204 110 33 chr20 37763080 37763155 -34390727 - MER58B DNA MER1_type -2298 122 3 913 163 0 7 chr20 37763163 37763316 -34390566 - FRAM SINE Alu -3 173 22 1983 123 13 25 chr20 37763329 37763645 -34390237 - AluJb SINE Alu 0 312 1 24 0 0 0 chr20 37763652 37763676 -34390206 + AT_rich Low_complexity Low_complexity 1 24 0 1321 126 88 0 chr20 37763717 37763932 -34389950 - AluSg/x SINE Alu -13 299 66 1474 171 7 48 chr20 37763932 37764225 -34389657 - AluJo SINE Alu -31 281 1 442 261 43 19 chr20 37764232 37764393 -34389489 - L1MEc LINE L1 -5951 168 4 240 182 23 0 chr20 37764490 37764534 -34389348 + L2 LINE L2 3264 3308 -5 2240 98 0 7 chr20 37764868 37765174 -34388708 + AluSx SINE Alu 1 304 -8 187 356 17 0 chr20 37765233 37765292 -34388590 - MIR SINE MIR 0 262 203 894 115 0 8 chr20 37765335 37765465 -34388417 + FLAM_C SINE Alu 1 129 -4 219 267 267 8 chr20 37765548 37765668 -34388214 - L3 LINE CR1 -74 1503 1353 378 306 219 23 chr20 37765706 37765971 -34387911 - L3 LINE CR1 -417 1160 844 241 135 0 0 chr20 37765976 37766013 -34387869 - tRNA-Cys-TGC tRNA tRNA -38 37 1 1864 146 0 31 chr20 37766124 37766446 -34387436 - AluJb SINE Alu 0 312 1 507 245 106 48 chr20 37766464 37766586 -34387296 - L2 LINE L2 -256 3057 2917 2174 100 0 7 chr20 37766586 37766885 -34386997 + AluSx SINE Alu 1 297 -15 507 245 106 48 chr20 37766885 37766970 -34386912 - L2 LINE L2 -396 2917 2838 763 231 93 13 chr20 37767091 37767316 -34386566 - MIR SINE MIR -16 246 4 791 173 0 0 chr20 37767580 37767707 -34386175 + FLAM_A SINE Alu 1 127 -6 2089 125 0 0 chr20 37767713 37768018 -34385864 + AluSx SINE Alu 1 305 -7 26 0 0 0 chr20 37768088 37768114 -34385768 + AT_rich Low_complexity Low_complexity 1 26 0 324 254 142 40 chr20 37768118 37768287 -34385595 - MIR SINE MIR -62 146 8 279 287 11 46 chr20 37769071 37769158 -34384724 - L2 LINE L2 0 3313 3230 903 119 8 0 chr20 37769169 37769303 -34384579 + AluSq/x SINE Alu 1 135 -177 2015 114 23 0 chr20 37769303 37769602 -34384280 + AluSx SINE Alu 1 306 -6 1031 287 91 24 chr20 37769610 37769862 -34384020 - L2 LINE L2 -69 3244 3011 1544 175 61 9 chr20 37769862 37770188 -34383694 + L1MB8 LINE L1 5836 6178 0 1031 287 91 24 chr20 37770188 37770409 -34383473 - L2 LINE L2 -302 3011 2739 1939 129 3 0 chr20 37770422 37770708 -34383174 - AluSx SINE Alu -23 289 3 239 196 0 0 chr20 37770753 37770809 -34383073 + LTR66 LTR ERVL 401 456 -154 192 255 20 0 chr20 37770855 37770906 -34382976 - L2 LINE L2 -664 2650 2599 1643 165 30 24 chr20 37771659 37771956 -34381926 - AluJo SINE Alu -13 299 1 867 263 84 139 chr20 37772505 37773160 -34380722 - L2 LINE L2 -1 3312 2623 1914 114 47 13 chr20 37773160 37773459 -34380423 + AluSx SINE Alu 1 309 -3 715 129 9 0 chr20 37773345 37773461 -34380421 + AluSg/x SINE Alu 192 308 -1 * 867 263 84 139 chr20 37773459 37773839 -34380043 - L2 LINE L2 -690 2623 2316 1252 129 0 0 chr20 37773871 37774042 -34379840 + AluSg/x SINE Alu 135 305 -7 230 294 47 24 chr20 37774044 37774129 -34379753 + MIR SINE MIR 176 262 0 784 293 32 4 chr20 37775836 37776085 -34377797 + MIR SINE MIR 1 256 -6 237 331 108 0 chr20 37776502 37776632 -34377250 + MIR SINE MIR 49 192 -70 2285 127 0 0 chr20 37776675 37776975 -34376907 + AluSq SINE Alu 1 300 -13 208 362 78 0 chr20 37777161 37777277 -34376605 - L2 LINE L2 -10 3303 3179 862 177 171 11 chr20 37777944 37778125 -34375757 - AluSx SINE Alu -11 298 89 204 304 18 0 chr20 37778163 37778219 -34375663 - MIR3 SINE MIR -9 199 143 609 96 0 0 chr20 37778310 37778393 -34375489 - AluSx SINE Alu -230 83 1 1414 115 0 5 chr20 37778847 37779039 -34374843 + AluSg/x SINE Alu 110 300 -10 182 339 18 0 chr20 37779178 37779234 -34374648 - MIR3 SINE MIR -9 199 143 213 39 0 0 chr20 37779497 37779523 -34374359 + (TCTCC)n Simple_repeat Simple_repeat 2 27 0 456 255 75 116 chr20 37782830 37783053 -34370829 - L2 LINE L2 -43 3229 3019 2438 96 0 0 chr20 37783053 37783355 -34370527 + AluSx SINE Alu 1 302 -10 456 255 75 116 chr20 37783355 37783425 -34370457 - L2 LINE L2 -253 3019 2948 307 296 200 22 chr20 37783478 37783833 -34370049 - L2 LINE L2 -453 2861 2444 227 298 60 0 chr20 37784075 37784159 -34369723 + L2 LINE L2 3164 3252 -20 272 309 43 0 chr20 37784383 37784477 -34369405 + MIR SINE MIR 50 147 -115 250 275 0 109 chr20 37784985 37785123 -34368759 - MIR SINE MIR -120 142 20 258 330 68 10 chr20 37785185 37785288 -34368594 + MIR3 SINE MIR 51 159 -49 481 157 116 107 chr20 37785936 37785997 -34367885 + MER58A DNA MER1_type 4 63 -278 2219 124 0 3 chr20 37785997 37786296 -34367586 - AluSg SINE Alu -12 298 1 481 157 116 107 chr20 37786296 37786355 -34367527 + MER58A DNA MER1_type 63 125 -99 263 324 86 0 chr20 37787312 37787417 -34366465 + L2 LINE L2 3154 3267 -5 2028 152 0 3 chr20 37788399 37788689 -34365193 + AluSx SINE Alu 4 292 -20 260 204 54 43 chr20 37788693 37788786 -34365096 + L1ME2 LINE L1 6062 6155 -9 209 262 33 0 chr20 37788800 37788861 -34365021 - MER5B DNA MER1_type -115 63 1 287 344 62 0 chr20 37789757 37789885 -34363997 - L2 LINE L2 -28 3244 3109 895 204 0 0 chr20 37790387 37790539 -34363343 - FRAM SINE Alu -21 155 4 2384 99 3 13 chr20 37790927 37791241 -34362641 - AluSp SINE Alu -2 311 1 1225 138 0 6 chr20 37795286 37795460 -34358422 + AluJb SINE Alu 134 306 -6 1647 145 93 24 chr20 37795470 37795760 -34358122 + AluJb SINE Alu 2 311 -1 365 228 41 87 chr20 37796132 37796351 -34357531 - L1MC5 LINE L1 -865 7096 6888 229 243 71 138 chr20 37796383 37796432 -34357450 - L1MC4a LINE L1 -1072 6736 6685 2317 99 3 10 chr20 37796432 37796746 -34357136 + AluSx SINE Alu 1 312 0 229 243 71 138 chr20 37796746 37796845 -34357037 - L1MC4a LINE L1 -1123 6685 6581 411 132 57 38 chr20 37796845 37796951 -34356931 + L1MB3 LINE L1 6073 6180 -3 229 243 71 138 chr20 37796951 37796985 -34356897 - L1MC4a LINE L1 -1227 6581 6570 2375 83 13 0 chr20 37796985 37797287 -34356595 + AluSg SINE Alu 1 306 -4 229 243 71 138 chr20 37797287 37797341 -34356541 - L1MC4a LINE L1 -1238 6570 6514 2247 139 0 0 chr20 37797345 37797654 -34356228 - AluSx SINE Alu -3 309 1 1221 207 0 5 chr20 37797699 37797921 -34355961 + AluJb SINE Alu 78 298 -14 2298 100 3 0 chr20 37797965 37798255 -34355627 - AluSg SINE Alu -19 291 1 409 285 111 64 chr20 37798269 37798504 -34355378 - L1MC4a LINE L1 -1455 6353 6108 293 204 183 78 chr20 37799096 37799291 -34354591 - L2 LINE L2 -339 2975 2751 2463 81 3 0 chr20 37799291 37799589 -34354293 - AluSp SINE Alu -14 299 1 293 204 183 78 chr20 37799589 37799623 -34354259 - L2 LINE L2 -563 2751 2722 515 132 0 0 chr20 37801517 37801593 -34352289 + AluJ/FLAM SINE Alu 9 84 -228 1697 145 71 17 chr20 37801704 37802000 -34351882 - AluSx SINE Alu 0 312 1 545 206 84 13 chr20 37802000 37802155 -34351727 - Charlie5 DNA MER1_type -206 2406 2241 375 118 79 0 chr20 37802154 37802230 -34351652 - Charlie5 DNA MER1_type -2488 124 43 * 2486 90 0 0 chr20 37802378 37802677 -34351205 - AluSq SINE Alu -14 299 1 811 219 25 71 chr20 37802767 37802942 -34350940 + MLT1C LTR MaLR 8 167 -300 2262 106 3 3 chr20 37802942 37803234 -34350648 + AluSq SINE Alu 1 292 -21 811 219 25 71 chr20 37803234 37803312 -34350570 + MLT1C LTR MaLR 167 248 -219 1447 124 70 12 chr20 37803312 37803569 -34350313 - MER66B LTR ERV1 0 486 215 242 235 118 0 chr20 37803568 37803636 -34350246 - AluJ/FLAM SINE Alu -226 76 1 * 260 288 78 58 chr20 37803665 37803870 -34350012 - LTR67 LTR ERVL 0 557 349 483 263 7 2 chr20 37803879 37804015 -34349867 + MLT1H LTR MaLR 1 174 -375 1953 173 0 10 chr20 37804016 37804322 -34349560 + AluJo SINE Alu 2 304 -8 288 337 54 65 chr20 37804324 37804585 -34349297 + L1MEd LINE L1 307 564 -5555 1811 110 12 110 chr20 37805297 37805623 -34348259 - AluJb SINE Alu -18 294 1 297 243 189 36 chr20 37807446 37807557 -34346325 + L2 LINE L2 3185 3312 -1 2367 104 0 3 chr20 37807575 37807874 -34346008 - AluSx SINE Alu -14 298 1 2246 100 0 17 chr20 37807880 37808223 -34345659 - AluSq SINE Alu 0 313 1 526 310 91 33 chr20 37808234 37808423 -34345459 + L2 LINE L2 2204 2381 -933 2278 113 0 13 chr20 37808423 37808733 -34345149 - AluSx SINE Alu -6 306 1 526 310 91 33 chr20 37808733 37808833 -34345049 + L2 LINE L2 2381 2474 -840 1565 187 30 17 chr20 37808833 37809001 -34344881 - AluSx SINE Alu -8 304 129 2109 138 0 7 chr20 37809001 37809305 -34344577 - AluSx SINE Alu -5 307 6 1565 187 30 17 chr20 37809305 37809436 -34344446 - AluSx SINE Alu -183 129 1 526 310 91 33 chr20 37809436 37809509 -34344373 + L2 LINE L2 2474 2588 -726 465 195 17 169 chr20 37809706 37809782 -34344100 + L1MD3 LINE L1 7800 7886 -109 2287 92 10 16 chr20 37809782 37810086 -34343796 + AluSp SINE Alu 1 302 -11 465 195 17 169 chr20 37810086 37810134 -34343748 + L1MD3 LINE L1 7886 7940 -55 1713 154 68 10 chr20 37810134 37810246 -34343636 + AluJo SINE Alu 1 105 -207 423 0 0 0 chr20 37810246 37810293 -34343589 + (CA)n Simple_repeat Simple_repeat 2 48 0 1713 154 68 10 chr20 37810293 37810473 -34343409 + AluJo SINE Alu 105 310 -2 465 195 17 169 chr20 37810473 37810578 -34343304 + L1MD3 LINE L1 7940 7995 0 1122 154 97 15 chr20 37810584 37810779 -34343103 + AluJo SINE Alu 84 294 -18 2263 115 0 0 chr20 37810840 37811135 -34342747 - AluSc SINE Alu -14 295 1 2327 117 3 0 chr20 37811205 37811505 -34342377 + AluSx SINE Alu 1 301 -11 315 0 0 0 chr20 37811505 37811519 -34342363 + (TG)n Simple_repeat Simple_repeat 1 49 0 315 0 0 0 chr20 37811519 37811554 -34342328 + (TG)n Simple_repeat Simple_repeat 2 36 0 1272 95 36 32 chr20 37811589 37811616 -34342266 - L1PA10 LINE L1 -8 6160 6135 2217 100 20 17 chr20 37811616 37811917 -34341965 + AluSc SINE Alu 1 302 -7 1272 95 36 32 chr20 37811917 37812110 -34341772 - L1PA10 LINE L1 -33 6135 5939 298 143 0 0 chr20 37812130 37812179 -34341703 - L1MB7 LINE L1 -98 6086 6038 823 218 25 96 chr20 37812316 37812601 -34341281 - L1MEd LINE L1 -4879 1235 1005 2254 108 10 3 chr20 37812601 37812897 -34340985 - AluSx SINE Alu -14 298 1 823 218 25 96 chr20 37812897 37812989 -34340893 - L1MEd LINE L1 -5109 1005 908 1179 74 20 0 chr20 37813006 37813154 -34340728 - AluSg/x SINE Alu -13 299 149 255 134 152 0 chr20 37813158 37813224 -34340658 + MIR SINE MIR 88 145 -63 2181 125 0 0 chr20 37813234 37813523 -34340359 + AluSx SINE Alu 9 297 -15 829 138 0 43 chr20 37813910 37814048 -34339834 - FLAM_A SINE Alu -1 132 1 2017 126 14 3 chr20 37814108 37814401 -34339481 + AluSq SINE Alu 1 296 -17 2174 119 0 3 chr20 37814452 37814745 -34339137 - AluSg SINE Alu -18 292 1 211 70 23 23 chr20 37814765 37814808 -34339074 + (TTA)n Simple_repeat Simple_repeat 1 43 0 2322 81 0 56 chr20 37814843 37815166 -34338716 - AluSg SINE Alu -5 305 1 209 350 70 0 chr20 37815167 37815267 -34338615 + L2 LINE L2 3152 3258 -14 2170 116 0 26 chr20 37815319 37815661 -34338221 - AluSq SINE Alu 0 313 1 2020 124 0 39 chr20 37815661 37815968 -34337914 - AluSx SINE Alu -15 297 3 619 227 149 7 chr20 37816062 37816216 -34337666 - MER5A DNA MER1_type -1 188 13 2694 41 0 22 chr20 37816503 37816821 -34337061 - AluY SINE Alu 0 311 1 336 219 55 94 chr20 37816866 37816994 -34336888 + L1MCa LINE L1 1959 2081 -4345 368 223 45 102 chr20 37817004 37817161 -34336721 + L1MCa LINE L1 1918 2065 -4361 324 219 12 119 chr20 37817061 37817221 -34336661 - L1MCa LINE L1 -4362 2064 1922 * 345 194 37 119 chr20 37817178 37817312 -34336570 + L1MCa LINE L1 1959 2081 -4345 26 0 0 0 chr20 37817312 37817338 -34336544 + AT_rich Low_complexity Low_complexity 1 26 0 395 136 0 0 chr20 37817355 37817414 -34336468 - AluJo SINE Alu -20 282 224 492 198 94 158 chr20 37817573 37817901 -34335981 + MER51A LTR ERV1 328 634 0 1217 149 79 23 chr20 37817922 37818005 -34335877 - AluJo SINE Alu -86 226 149 2097 127 0 3 chr20 37818005 37818296 -34335586 - AluSx SINE Alu -4 308 19 1217 149 79 23 chr20 37818296 37818426 -34335456 - AluJo SINE Alu -163 149 1 360 306 100 34 chr20 37818429 37818702 -34335180 - L1MC4a LINE L1 -346 5826 5636 407 265 34 8 chr20 37819129 37819246 -34334636 + MIR SINE MIR 30 149 -113 390 259 102 0 chr20 37819300 37819408 -34334474 - MER5A DNA MER1_type -70 119 1 301 271 24 0 chr20 37820701 37820786 -34333096 - MIR SINE MIR -71 137 51 297 277 277 13 chr20 37821011 37821170 -34332712 + MIR SINE MIR 19 219 -43 370 214 168 23 chr20 37821348 37821479 -34332403 - L2 LINE L2 -789 2525 2376 749 199 13 0 chr20 37821502 37821653 -34332229 - MLT1F LTR MaLR -2 540 388 506 16 16 0 chr20 37821679 37821742 -34332140 + (TCTA)n Simple_repeat Simple_repeat 2 65 0 2215 92 0 7 chr20 37821742 37822024 -34331858 - AluSc SINE Alu -29 280 1 2250 101 20 0 chr20 37822476 37822772 -34331110 - AluSx SINE Alu -9 303 2 1548 176 62 62 chr20 37822773 37822946 -34330936 - MLT1F LTR MaLR -201 341 166 2290 100 0 29 chr20 37822946 37823257 -34330625 + AluSq SINE Alu 1 302 -11 1548 176 62 62 chr20 37823257 37823424 -34330458 - MLT1F LTR MaLR -375 167 1 1240 243 459 6 chr20 37823433 37824636 -34329246 - L2 LINE L2 -932 2382 635 403 294 61 25 chr20 37824726 37824889 -34328993 + MIR SINE MIR 91 259 -3 223 260 65 39 chr20 37824906 37824983 -34328899 + MIR SINE MIR 183 261 -1 248 306 238 26 chr20 37825412 37825605 -34328277 + MIR SINE MIR 13 246 -16 241 167 0 0 chr20 37825648 37825690 -34328192 - MER5A DNA MER1_type -85 104 63 715 162 49 0 chr20 37825696 37825838 -34328044 - L1MB4 LINE L1 0 6180 6032 921 137 0 34 chr20 37825867 37826013 -34327869 + FLAM_C SINE Alu 3 143 0 642 302 28 0 chr20 37826671 37826853 -34327029 + MIR SINE MIR 2 188 -74 347 239 146 31 chr20 37826952 37827082 -34326800 + MIR SINE MIR 48 192 -70 321 185 261 25 chr20 37827104 37827223 -34326659 - L2 LINE L2 0 3313 3167 235 264 19 0 chr20 37827227 37827280 -34326602 + Tigger5 DNA MER2_type 2 55 -2268 499 110 0 130 chr20 37827280 37827309 -34326573 + Tigger5 DNA MER2_type 2237 2268 -55 2413 104 0 0 chr20 37827309 37827608 -34326274 - AluSx SINE Alu -13 299 1 499 110 0 130 chr20 37827608 37827678 -34326204 + Tigger5 DNA MER2_type 2268 2323 0 5582 255 131 36 chr20 37827679 37828005 -34325877 - L2 LINE L2 -157 3156 2863 2422 103 0 0 chr20 37828005 37828307 -34325575 + AluSx SINE Alu 1 302 -10 5582 255 131 36 chr20 37828307 37828701 -34325181 - L2 LINE L2 -450 2863 2508 2042 121 0 7 chr20 37828701 37828983 -34324899 + AluSx SINE Alu 21 300 -12 5582 255 131 36 chr20 37828983 37830692 -34323190 - L2 LINE L2 -805 2508 398 1547 141 141 11 chr20 37830692 37830961 -34322921 - AluJb SINE Alu -2 310 7 5582 255 131 36 chr20 37830961 37831401 -34322481 - L2 LINE L2 -2915 398 2 314 206 0 0 chr20 37831743 37831806 -34322076 - MIR SINE MIR -68 140 78 278 320 170 8 chr20 37832900 37833230 -34320652 - L2 LINE L2 -242 3030 2646 1149 127 30 0 chr20 37833343 37833508 -34320374 + AluSg/x SINE Alu 135 304 -6 275 209 0 45 chr20 37837707 37837774 -34316108 + G-rich Low_complexity Low_complexity 2 65 0 1313 223 58 69 chr20 37838786 37839265 -34314617 + MLT1K LTR MaLR 3 476 -112 2087 145 0 0 chr20 37839823 37840126 -34313756 + AluJb SINE Alu 1 303 -9 1879 151 0 62 chr20 37840914 37841239 -34312643 + AluJb SINE Alu 4 308 -4 243 246 29 43 chr20 37841853 37841922 -34311960 - MIR SINE MIR -93 169 102 2269 99 7 0 chr20 37841923 37842216 -34311666 + AluSx SINE Alu 1 295 -17 401 88 0 44 chr20 37843195 37843263 -34310619 - AluJo SINE Alu -176 136 72 2423 97 3 0 chr20 37843263 37843574 -34310308 + AluSx SINE Alu 1 312 0 627 171 0 32 chr20 37843612 37843735 -34310147 - FLAM_C SINE Alu -19 124 6 280 273 60 38 chr20 37843746 37843998 -34309884 - L1MCa LINE L1 -810 1977 1732 682 175 0 16 chr20 37843998 37844124 -34309758 - FLAM_A SINE Alu -5 128 5 280 273 60 38 chr20 37844124 37844160 -34309722 - L1MCa LINE L1 -1055 1732 1446 2407 115 0 0 chr20 37844170 37844482 -34309400 - AluSx SINE Alu 0 312 1 253 286 29 29 chr20 37844483 37844588 -34309294 + L2 LINE L2 3130 3234 -79 1938 130 24 14 chr20 37844685 37844977 -34308905 + AluJb SINE Alu 1 295 -17 2310 206 82 0 chr20 37844983 37845660 -34308222 + L1M3 LINE L1 4737 5466 -714 2542 71 0 3 chr20 37845667 37845977 -34307905 - AluSg SINE Alu -1 309 1 2412 104 0 0 chr20 37846007 37846315 -34307567 + AluSx SINE Alu 1 308 -4 608 290 73 51 chr20 37846315 37846630 -34307252 + L2 LINE L2 2706 3024 -289 902 195 25 0 chr20 37846630 37846789 -34307093 - AluJb SINE Alu -30 282 120 487 80 340 20 chr20 37846806 37846906 -34306976 + FLAM_C SINE Alu 2 133 0 497 201 7 171 chr20 37846950 37847035 -34306847 + L2 LINE L2 3083 3180 -133 2006 113 7 52 chr20 37847035 37847345 -34306537 - AluSp SINE Alu -17 296 1 497 201 7 171 chr20 37847345 37847504 -34306378 + L2 LINE L2 3180 3282 -31 2443 60 40 3 chr20 37847504 37847802 -34306080 + AluSp SINE Alu 1 309 -4 497 201 7 171 chr20 37847802 37847825 -34306057 + L2 LINE L2 3282 3307 -6 281 354 56 0 chr20 37847825 37848023 -34305859 - L1M4 LINE L1 -2424 3722 3514 2046 132 7 3 chr20 37848067 37848356 -34305526 + AluSx SINE Alu 1 290 -22 558 149 45 82 chr20 37848378 37848477 -34305405 - AluJo SINE Alu -80 232 138 2242 119 6 6 chr20 37848477 37848788 -34305094 - AluSx SINE Alu -1 311 1 558 149 45 82 chr20 37848788 37848822 -34305060 - AluJo SINE Alu -174 138 104 2115 117 0 17 chr20 37848822 37849122 -34304760 + AluSg SINE Alu 1 295 -15 1201 202 116 23 chr20 37849123 37849724 -34304158 + L1M4b LINE L1 492 1171 -5375 303 360 34 0 chr20 37849724 37849813 -34304069 - L1MC4 LINE L1 -1336 6706 6615 2584 62 7 0 chr20 37849813 37850120 -34303762 - AluY SINE Alu -2 309 1 1291 210 11 102 chr20 37850126 37850251 -34303631 + L1M4b LINE L1 1169 1304 -5238 2233 97 10 10 chr20 37850251 37850549 -34303333 - AluY SINE Alu -13 298 1 1291 210 11 102 chr20 37850549 37850819 -34303063 + L1M4b LINE L1 1304 1597 -4945 1726 137 112 14 chr20 37850819 37851096 -34302786 + AluSq SINE Alu 1 304 -9 2354 100 3 0 chr20 37851100 37851400 -34302482 + AluSp SINE Alu 1 301 -12 1291 210 11 102 chr20 37851400 37851440 -34302442 + L1M4b LINE L1 1509 1551 -4991 2017 122 65 0 chr20 37851459 37851737 -34302145 - AluSq SINE Alu -17 296 1 2232 189 53 85 chr20 37851737 37852351 -34301531 - L1MC4a LINE L1 -881 6927 6332 1904 139 3 59 chr20 37852356 37852680 -34301202 - AluSx SINE Alu -6 306 1 1000 152 0 0 chr20 37852680 37852825 -34301057 - AluJo SINE Alu -167 145 1 952 209 37 61 chr20 37852848 37853145 -34300737 - L1MC4a LINE L1 -1488 6320 6031 2394 88 0 16 chr20 37853145 37853453 -34300429 - AluSc SINE Alu -6 303 1 364 311 51 23 chr20 37853612 37853789 -34300093 + MIR3 SINE MIR 23 204 -4 1147 137 93 90 chr20 37854649 37854737 -34299145 + MER33 DNA MER1_type 1 87 -2498 1066 202 128 57 chr20 37854737 37854862 -34299020 + AluJo SINE Alu 1 116 -186 1705 199 0 3 chr20 37854862 37855169 -34298713 - AluJb SINE Alu -4 308 3 1066 202 128 57 chr20 37855169 37855325 -34298557 + AluJo SINE Alu 116 302 0 1147 137 93 90 chr20 37855325 37855432 -34298450 + MER33 DNA MER1_type 87 192 -2393 2386 86 26 3 chr20 37855432 37855735 -34298147 - AluSx SINE Alu -2 310 1 1147 137 93 90 chr20 37855735 37855784 -34298098 + MER33 DNA MER1_type 192 239 -2346 2604 61 0 6 chr20 37855784 37856095 -34297787 - AluY SINE Alu -2 309 1 1147 137 93 90 chr20 37856095 37856169 -34297713 + MER33 DNA MER1_type 239 322 -2 1052 154 18 0 chr20 37856277 37856446 -34297436 - AluSg/x SINE Alu -7 305 134 253 308 55 14 chr20 37857218 37857317 -34296565 + MIR SINE MIR 45 149 -113 2248 116 7 0 chr20 37857317 37857619 -34296263 + AluSq SINE Alu 1 304 -9 253 308 55 14 chr20 37857619 37857686 -34296196 + MIR SINE MIR 149 212 -50 1730 157 25 11 chr20 37857710 37857991 -34295891 + AluJo SINE Alu 1 285 -27 2058 120 18 7 chr20 37858035 37858318 -34295564 + AluSx SINE Alu 1 286 -26 793 52 52 12 chr20 37858357 37858529 -34295353 + (TA)n Simple_repeat Simple_repeat 2 180 0 1483 240 73 20 chr20 37858596 37859396 -34294486 + L1MEc LINE L1 1887 2692 -3523 943 182 167 0 chr20 37859431 37859623 -34294259 + MER58A DNA MER1_type 1 224 0 2300 104 3 0 chr20 37862189 37862496 -34291386 - AluSx SINE Alu -4 308 1 1912 146 7 0 chr20 37863054 37863334 -34290548 - AluJb SINE Alu -30 282 1 1483 167 30 66 chr20 37863337 37863429 -34290453 - L1MB3 LINE L1 0 6183 6089 2573 65 3 0 chr20 37863429 37863737 -34290145 + AluY SINE Alu 2 310 -1 1483 167 30 66 chr20 37863737 37864010 -34289872 - L1MB3 LINE L1 -94 6089 5831 392 320 94 49 chr20 37864137 37864207 -34289675 + L2 LINE L2 2837 2902 -411 1669 159 0 33 chr20 37864207 37864483 -34289399 - AluJo SINE Alu -45 267 1 392 320 94 49 chr20 37864483 37864859 -34289023 + L2 LINE L2 2902 3303 -10 2187 136 3 3 chr20 37864880 37865188 -34288694 + AluSq SINE Alu 1 308 -5 862 180 12 0 chr20 37865189 37865361 -34288521 + L1ME2 LINE L1 5690 5863 -301 458 290 46 0 chr20 37865381 37865512 -34288370 - MER82 DNA MER2_type 0 653 517 786 188 0 0 chr20 37865515 37865648 -34288234 + FLAM_C SINE Alu 1 133 0 2282 108 0 0 chr20 37865658 37865944 -34287938 - AluSx SINE Alu -22 290 5 2492 90 0 0 chr20 37866294 37866604 -34287278 + AluSg SINE Alu 1 310 0 22 43 0 21 chr20 37866636 37866666 -34287216 + AT_rich Low_complexity Low_complexity 1 31 -15 1639 91 4 0 chr20 37866666 37866908 -34286974 + MER75B DNA T2_type 1 243 0 22 43 0 21 chr20 37866908 37866924 -34286958 + AT_rich Low_complexity Low_complexity 31 46 0 2050 130 16 23 chr20 37866924 37867232 -34286650 - AluSx SINE Alu 0 312 7 234 226 75 0 chr20 37867268 37867321 -34286561 - MER82 DNA MER2_type -161 492 436 2194 117 0 7 chr20 37867321 37867620 -34286262 - AluSx SINE Alu -7 305 9 835 196 17 17 chr20 37867626 37867805 -34286077 - MER82 DNA MER2_type -445 208 30 687 198 21 142 chr20 37867825 37868068 -34285814 + L1ME2 LINE L1 5901 6105 -59 2049 140 7 0 chr20 37868068 37868353 -34285529 + AluSx SINE Alu 1 287 -25 687 198 21 142 chr20 37868353 37868397 -34285485 + L1ME2 LINE L1 6105 6153 -11 2193 107 0 49 chr20 37868436 37868762 -34285120 + AluSg SINE Alu 1 310 0 2094 122 31 0 chr20 37868811 37869098 -34284784 + AluSx SINE Alu 1 296 -16 1205 168 25 5 chr20 37869158 37869361 -34284521 - AluJo SINE Alu -19 293 87 545 318 28 60 chr20 37869362 37869714 -34284168 + L1MCc LINE L1 102 442 -5981 2133 118 3 50 chr20 37869756 37870077 -34283805 + AluSq SINE Alu 1 306 -7 764 257 85 25 chr20 37870542 37870950 -34282932 + L1MCc LINE L1 1129 1566 -4889 805 233 72 0 chr20 37870966 37871202 -34282680 + L1MCc LINE L1 3312 3564 -3377 628 111 0 0 chr20 37871237 37871336 -34282546 + AluSc SINE Alu 209 307 -2 2449 204 38 68 chr20 37871338 37871772 -34282110 + L1MCc LINE L1 4059 4456 -2485 717 126 0 17 chr20 37871772 37871891 -34281991 + FLAM_C SINE Alu 2 118 -15 2449 204 38 68 chr20 37871891 37872306 -34281576 + L1MCc LINE L1 4456 4882 -2059 513 101 0 0 chr20 37872330 37872399 -34281483 + AluJ/FLAM SINE Alu 9 77 -235 381 143 0 107 chr20 37872406 37872490 -34281392 + Charlie1 DNA MER1_type 1945 2019 -742 738 172 0 0 chr20 37872490 37872606 -34281276 + AluJo/FLAM SINE Alu 3 118 -194 365 105 70 0 chr20 37872606 37872663 -34281219 - Alu SINE Alu -9 292 232 242 65 0 0 chr20 37872670 37872701 -34281181 + Charlie1 DNA MER1_type 2731 2761 0 260 247 56 34 chr20 37872712 37872801 -34281081 + L1ME LINE L1 5674 5764 -406 447 113 0 0 chr20 37872805 37872876 -34281006 + (TA)n Simple_repeat Simple_repeat 1 71 0 399 280 0 9 chr20 37873694 37873801 -34280081 + MER5A DNA MER1_type 4 109 -80 315 0 0 0 chr20 37873924 37873959 -34279923 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 431 174 31 0 chr20 37873974 37874072 -34279810 + L2 LINE L2 2446 2546 -768 847 100 8 8 chr20 37874073 37874193 -34279689 + AluSq/x SINE Alu 1 120 -192 463 238 193 6 chr20 37874242 37874423 -34279459 + L2 LINE L2 2047 2261 -1053 1582 117 5 9 chr20 38074433 38074656 -34079226 - AluSq SINE Alu -91 222 1 2274 118 0 0 chr20 38075323 38075628 -34078254 + AluSg SINE Alu 5 309 -1 246 266 166 7 chr20 38075631 38075770 -34078112 - L1ME4a LINE L1 -10 6111 5951 1316 158 0 35 chr20 38075942 38076170 -34077712 + AluJo SINE Alu 1 220 -92 229 91 0 30 chr20 38076170 38076203 -34077679 + Alu SINE Alu 85 116 -17 414 0 0 0 chr20 38076232 38076278 -34077604 + (TAGA)n Simple_repeat Simple_repeat 4 49 0 194 236 0 14 chr20 38076328 38076400 -34077482 + (TA)n Simple_repeat Simple_repeat 1 71 0 217 167 37 0 chr20 38076436 38076490 -34077392 + (TATATG)n Simple_repeat Simple_repeat 2 57 0 1789 118 0 16 chr20 38076633 38076718 -34077164 + AluSq SINE Alu 52 137 -176 2160 113 17 0 chr20 38076718 38077011 -34076871 + AluSp SINE Alu 1 298 -15 1789 118 0 16 chr20 38077011 38077180 -34076702 + AluSq SINE Alu 137 302 -11 2456 52 3 3 chr20 38077266 38077557 -34076325 + AluY SINE Alu 1 291 -20 21 0 0 0 chr20 38077820 38077841 -34076041 + AT_rich Low_complexity Low_complexity 1 21 0 2316 99 3 3 chr20 38077854 38078157 -34075725 + AluSp SINE Alu 1 303 -10 1784 169 0 28 chr20 38078157 38078447 -34075435 - AluJo SINE Alu -30 282 1 1896 170 0 6 chr20 38078627 38078938 -34074944 + AluJo SINE Alu 1 309 -3 2149 98 24 7 chr20 38079567 38079863 -34074019 - AluSg SINE Alu -9 301 1 189 0 0 0 chr20 38079987 38080008 -34073874 + (CA)n Simple_repeat Simple_repeat 1 21 0 198 0 0 0 chr20 38080011 38080033 -34073849 + (CCA)n Simple_repeat Simple_repeat 1 22 0 1618 176 14 24 chr20 38080457 38080746 -34073136 + AluJo SINE Alu 1 286 -26 198 191 0 0 chr20 38080746 38080788 -34073094 + (TA)n Simple_repeat Simple_repeat 1 42 0 405 240 78 32 chr20 38080796 38081035 -34072847 - L1ME3 LINE L1 -216 5950 5697 1841 148 41 32 chr20 38081040 38081113 -34072769 + Tigger2 DNA MER2_type 7 78 -2640 1783 149 57 7 chr20 38081113 38081394 -34072488 - AluJo SINE Alu -17 295 1 1841 148 41 32 chr20 38081394 38081435 -34072447 + Tigger2 DNA MER2_type 78 117 -2601 2185 134 0 3 chr20 38081435 38081748 -34072134 + AluSx SINE Alu 1 312 0 1841 148 41 32 chr20 38081748 38081977 -34071905 + Tigger2 DNA MER2_type 117 354 -2364 2418 87 0 3 chr20 38081977 38082277 -34071605 - AluSq SINE Alu -14 299 1 4207 113 13 25 chr20 38082277 38082905 -34070977 + Tigger2 DNA MER2_type 1165 1784 -934 2379 86 7 3 chr20 38082911 38083215 -34070667 + AluSc SINE Alu 1 305 -4 1638 178 0 59 chr20 38083221 38083307 -34070575 + AluJb SINE Alu 1 91 -221 2199 116 7 0 chr20 38083307 38083601 -34070281 + AluSq SINE Alu 1 296 -17 1638 178 0 59 chr20 38083601 38083620 -34070262 + AluJb SINE Alu 91 110 -202 6069 115 145 34 chr20 38083620 38084733 -34069149 - MER11B LTR ERVK 0 1236 1 1638 178 0 59 chr20 38084733 38084956 -34068926 + AluJb SINE Alu 110 312 0 6364 112 16 15 chr20 38084956 38085714 -34068168 + Tigger2 DNA MER2_type 1780 2541 -177 3384 124 52 0 chr20 38085714 38086215 -34067667 - MER1A DNA MER1_type 0 527 1 6364 112 16 15 chr20 38086215 38086390 -34067492 + Tigger2 DNA MER2_type 2541 2714 -4 278 278 0 0 chr20 38086452 38086542 -34067340 + L1MC4 LINE L1 6614 6703 -1339 351 113 0 0 chr20 38086543 38086596 -34067286 + (TA)n Simple_repeat Simple_repeat 2 54 0 2054 132 7 3 chr20 38086599 38086902 -34066980 - AluJo SINE Alu 0 312 9 372 264 30 94 chr20 38087035 38087182 -34066700 - L1ME3 LINE L1 -508 5658 5544 2308 92 0 23 chr20 38087182 38087488 -34066394 + AluSx SINE Alu 5 303 -9 372 264 30 94 chr20 38087488 38087643 -34066239 - L1ME3 LINE L1 -622 5544 5381 508 282 20 20 chr20 38087668 38087863 -34066019 + L2 LINE L2 3118 3312 -1 2158 117 3 10 chr20 38087979 38088270 -34065612 - AluSx SINE Alu -23 289 1 206 318 0 63 chr20 38088860 38089049 -34064833 + (CTCTG)n Simple_repeat Simple_repeat 3 179 0 2633 56 0 0 chr20 38089682 38089984 -34063898 + AluY SINE Alu 1 302 -9 2020 131 7 3 chr20 38090484 38090790 -34063092 - AluSx SINE Alu 0 307 1 1347 196 96 14 chr20 38092548 38092829 -34061053 + AluJo SINE Alu 6 309 -3 1085 227 21 8 chr20 38093226 38093468 -34060414 - MIR SINE MIR 0 262 18 202 264 160 9 chr20 38093568 38093674 -34060208 + L3 LINE CR1 1450 1571 -6 1830 177 0 3 chr20 38093676 38093975 -34059907 - AluJb SINE Alu -14 298 1 1983 145 0 7 chr20 38094092 38094409 -34059473 + AluJo SINE Alu 2 316 0 2280 108 3 0 chr20 38094837 38095134 -34058748 - AluSp SINE Alu -15 298 1 182 274 249 25 chr20 38095361 38095562 -34058320 - L2 LINE L2 -63 3250 3005 553 211 0 0 chr20 38095592 38095706 -34058176 + FRAM SINE Alu 50 163 -13 453 253 81 45 chr20 38095746 38095967 -34057915 - L2 LINE L2 -639 2675 2447 357 225 0 0 chr20 38095971 38096060 -34057822 + (TATATG)n Simple_repeat Simple_repeat 2 90 0 1957 159 0 10 chr20 38096061 38096370 -34057512 - AluSx SINE Alu -6 306 1 2538 70 0 6 chr20 38096428 38096741 -34057141 - AluY SINE Alu 0 311 1 1175 69 6 91 chr20 38096757 38096932 -34056950 - AluY SINE Alu -151 160 1 365 208 16 104 chr20 38096935 38097060 -34056822 - MIR SINE MIR -115 147 34 417 230 212 18 chr20 38097415 38097693 -34056189 + L1ME4a LINE L1 5790 6121 0 2272 91 7 0 chr20 38097704 38097990 -34055892 + AluSq SINE Alu 1 288 -25 216 0 0 0 chr20 38097992 38098016 -34055866 + (TTAAA)n Simple_repeat Simple_repeat 3 26 0 2399 90 0 0 chr20 38098046 38098346 -34055536 - AluSg SINE Alu -10 300 1 1711 232 61 82 chr20 38098947 38099201 -34054681 - L1ME3 LINE L1 -1 6161 5903 2335 81 3 7 chr20 38099201 38099497 -34054385 - AluSg1 SINE Alu -14 295 1 1711 232 61 82 chr20 38099497 38099578 -34054304 - L1ME3 LINE L1 -259 5903 5822 2363 87 3 0 chr20 38099578 38099867 -34054015 + AluSp SINE Alu 1 290 -23 180 0 0 0 chr20 38099870 38099890 -34053992 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 2438 94 0 0 chr20 38099898 38100197 -34053685 + AluSq SINE Alu 1 299 -14 1711 232 61 82 chr20 38100197 38100443 -34053439 - L1ME3 LINE L1 -349 5813 5571 2130 131 0 25 chr20 38100443 38100757 -34053125 + AluSx SINE Alu 1 306 -6 1711 232 61 82 chr20 38100757 38100909 -34052973 - L1ME3 LINE L1 -591 5571 5417 406 166 196 30 chr20 38100969 38101014 -34052868 - L1MC/D LINE L1 -864 5480 5444 2174 104 0 3 chr20 38101014 38101301 -34052581 - AluSg1 SINE Alu -23 286 1 406 166 196 30 chr20 38101301 38101399 -34052483 - L1MC/D LINE L1 -900 5444 5324 6160 119 165 9 chr20 38101793 38102899 -34050983 - MER52C LTR ERV1 0 1278 1 2115 117 7 0 chr20 38102940 38103260 -34050622 + AluSx SINE Alu 1 322 0 2486 48 3 0 chr20 38103450 38103743 -34050139 - AluY SINE Alu -17 294 1 929 108 0 31 chr20 38103876 38104006 -34049876 + FLAM_C SINE Alu 1 126 -17 2284 89 3 0 chr20 38104016 38104298 -34049584 + AluSp SINE Alu 1 283 -30 2217 117 10 0 chr20 38104342 38104642 -34049240 + AluSx SINE Alu 1 303 -9 1087 157 23 0 chr20 38104643 38104815 -34049067 + AluJb SINE Alu 137 312 0 1752 167 49 0 chr20 38104818 38105106 -34048776 + AluJo SINE Alu 1 302 -10 2371 93 0 10 chr20 38105199 38105499 -34048383 + AluSx SINE Alu 1 297 -15 348 238 238 49 chr20 38105536 38105582 -34048300 - MIR SINE MIR -10 252 216 2347 81 7 10 chr20 38105582 38105879 -34048003 - AluSq SINE Alu -17 296 1 348 238 238 49 chr20 38105879 38105996 -34047886 - MIR SINE MIR -46 216 58 1551 126 7 63 chr20 38106037 38106307 -34047575 + AluSx SINE Alu 50 304 -8 1899 146 0 0 chr20 38106538 38106818 -34047064 + AluJo SINE Alu 1 280 -32 2339 101 0 0 chr20 38106858 38107155 -34046727 - AluSx SINE Alu -15 297 1 2496 80 0 0 chr20 38107882 38108181 -34045701 - AluY SINE Alu -12 299 1 224 275 12 38 chr20 38108702 38108782 -34045100 - MIR3 SINE MIR -7 201 124 334 323 23 8 chr20 38109112 38109242 -34044640 - MIR SINE MIR -111 151 20 394 297 84 0 chr20 38109253 38109408 -34044474 - HAL1 LINE L1 -3 2504 2337 1723 174 42 34 chr20 38109414 38109800 -34044082 - L1ME3 LINE L1 -1 6161 5773 1342 141 0 5 chr20 38109803 38109995 -34043887 + AluSx SINE Alu 1 191 -121 2381 80 0 10 chr20 38110037 38110172 -34043710 + AluSp SINE Alu 1 136 -177 2257 98 3 13 chr20 38110172 38110478 -34043404 + AluSg SINE Alu 1 303 -7 2381 80 0 10 chr20 38110478 38110643 -34043239 + AluSp SINE Alu 136 298 -15 603 167 20 0 chr20 38110656 38110758 -34043124 + FLAM_A SINE Alu 3 106 -36 236 215 9 0 chr20 38110840 38110947 -34042935 + (TA)n Simple_repeat Simple_repeat 1 108 0 736 120 9 0 chr20 38111031 38111139 -34042743 + HY1 scRNA scRNA 1 109 -3 29 0 0 0 chr20 38111145 38111174 -34042708 + AT_rich Low_complexity Low_complexity 1 29 0 1888 152 0 7 chr20 38111442 38111744 -34042138 - AluJo SINE Alu -12 300 1 968 176 12 0 chr20 38112262 38112427 -34041455 + FAM SINE Alu 1 167 -8 1683 135 12 8 chr20 38112621 38112865 -34041017 + AluSx SINE Alu 56 300 -12 276 309 0 0 chr20 38113585 38113653 -34040229 - MIR SINE MIR -159 103 36 2353 77 3 0 chr20 38113806 38114092 -34039790 + AluSg SINE Alu 1 287 -23 1921 121 28 24 chr20 38114713 38115003 -34038879 + AluJo SINE Alu 1 291 -21 953 266 72 20 chr20 38115524 38115599 -34038283 - L1ME3 LINE L1 -330 5791 5721 2140 120 27 7 chr20 38115599 38115898 -34037984 + AluSx SINE Alu 1 305 -7 953 266 72 20 chr20 38115898 38116225 -34037657 - L1ME3 LINE L1 -400 5721 5368 2004 116 53 0 chr20 38117200 38117484 -34036398 + AluSx SINE Alu 12 310 -2 247 274 0 14 chr20 38117596 38117669 -34036213 - L2 LINE L2 -1 3312 3241 2657 11 0 0 chr20 38118842 38119163 -34034719 + AluY SINE Alu 1 321 0 2240 104 0 0 chr20 38119477 38119775 -34034107 - AluY SINE Alu -13 298 1 2275 103 0 0 chr20 38119803 38120108 -34033774 + AluSg SINE Alu 1 305 0 23 0 0 0 chr20 38120172 38120195 -34033687 + AT_rich Low_complexity Low_complexity 1 23 0 761 158 0 0 chr20 38120274 38120388 -34033494 + FLAM_C SINE Alu 1 114 -19 1723 154 67 7 chr20 38120462 38120747 -34033135 + AluJo SINE Alu 1 302 -10 2018 114 66 0 chr20 38121288 38121561 -34032321 + AluSq SINE Alu 1 291 -22 515 226 6 101 chr20 38122156 38122201 -34031681 + MER5A DNA MER1_type 30 78 -111 2184 101 20 3 chr20 38122201 38122497 -34031385 - AluSx SINE Alu -11 301 1 515 226 6 101 chr20 38122497 38122610 -34031272 + MER5A DNA MER1_type 78 173 -16 2467 92 0 0 chr20 38123544 38123848 -34030034 - AluSc SINE Alu -5 304 1 483 246 58 22 chr20 38123875 38124013 -34029869 - MIR SINE MIR -107 155 13 2163 108 10 0 chr20 38127276 38127571 -34026311 - AluSq SINE Alu -15 298 1 257 273 102 0 chr20 38128057 38128145 -34025737 - MIR SINE MIR -123 139 43 2298 93 7 0 chr20 38128397 38128698 -34025184 + AluSx SINE Alu 1 303 -9 2214 99 3 37 chr20 38128698 38129022 -34024860 + AluSq SINE Alu 1 313 0 2265 77 0 3 chr20 38129140 38129440 -34024442 + AluY SINE Alu 3 301 -10 2005 119 26 23 chr20 38129577 38129887 -34023995 - AluSx SINE Alu -1 311 1 1764 159 14 0 chr20 38129888 38130178 -34023704 - AluJo SINE Alu -1 311 18 406 245 168 7 chr20 38130189 38130344 -34023538 - MIR SINE MIR -14 248 69 2267 214 117 80 chr20 38130358 38130706 -34023176 - MER21B LTR ERV1 -33 830 496 831 114 46 38 chr20 38130706 38130837 -34023045 + FLAM_C SINE Alu 1 132 -1 2267 214 117 80 chr20 38130837 38130858 -34023024 - MER21B LTR ERV1 -367 496 477 2438 64 0 0 chr20 38130858 38131154 -34022728 + AluY SINE Alu 1 296 -15 2267 214 117 80 chr20 38131154 38131204 -34022678 - MER21B LTR ERV1 -386 477 430 2073 128 0 0 chr20 38131204 38131502 -34022380 + AluSx SINE Alu 1 298 -14 2267 214 117 80 chr20 38131502 38131870 -34022012 - MER21B LTR ERV1 -433 430 12 237 301 60 66 chr20 38132488 38132516 -34021366 + MER5A DNA MER1_type 1 28 -161 1528 180 27 3 chr20 38132516 38132810 -34021072 + AluJb SINE Alu 12 312 0 237 301 60 66 chr20 38132810 38132947 -34020935 + MER5A DNA MER1_type 28 165 -24 * 826 152 98 0 chr20 38132811 38132975 -34020907 - MER5A DNA MER1_type -9 180 1 582 238 152 0 chr20 38132993 38133144 -34020738 + MER5A DNA MER1_type 10 183 -6 240 368 48 6 chr20 38133146 38133312 -34020570 - MER5B DNA MER1_type 0 178 6 185 222 159 0 chr20 38134116 38134179 -34019703 + MIR SINE MIR 53 125 -83 1786 150 3 27 chr20 38134324 38134516 -34019366 - AluJo SINE Alu -19 293 109 189 0 0 0 chr20 38134516 38134537 -34019345 + (TGGGGG)n Simple_repeat Simple_repeat 5 25 0 1786 150 3 27 chr20 38134537 38134644 -34019238 - AluJo SINE Alu -203 109 1 198 0 0 0 chr20 38134811 38134833 -34019049 + (A)n Simple_repeat Simple_repeat 1 22 0 188 213 43 0 chr20 38134915 38134962 -34018920 + L2 LINE L2 3263 3311 -2 478 131 0 24 chr20 38135469 38135553 -34018329 + FLAM_C SINE Alu 53 134 -9 2128 93 0 0 chr20 38135753 38136032 -34017850 - AluSx SINE Alu -33 279 1 232 308 75 17 chr20 38136221 38136341 -34017541 + L2 LINE L2 3137 3263 -9 261 304 116 7 chr20 38136534 38136672 -34017210 - L2 LINE L2 -6 3307 3155 1353 197 7 21 chr20 38136689 38136817 -34017065 + AluJo SINE Alu 1 129 -183 2181 105 3 7 chr20 38136817 38137123 -34016759 + AluSp SINE Alu 1 305 -8 1353 197 7 21 chr20 38137123 38137273 -34016609 + AluJo SINE Alu 129 275 -37 315 158 0 0 chr20 38137389 38137446 -34016436 - MIR SINE MIR -108 154 98 2203 106 0 31 chr20 38137504 38137826 -34016056 - AluSx SINE Alu 0 312 1 676 231 88 16 chr20 38138820 38138889 -34014993 - MER3 DNA MER1_type 0 209 146 2281 62 3 26 chr20 38138889 38139196 -34014686 + AluSq SINE Alu 5 304 -9 676 231 88 16 chr20 38139196 38139308 -34014574 - MER3 DNA MER1_type -63 146 15 1812 143 32 0 chr20 38139397 38139676 -34014206 - AluJb SINE Alu -24 288 1 2293 74 0 26 chr20 38139819 38140130 -34013752 - AluY SINE Alu -8 303 1 2084 129 84 16 chr20 38140244 38140276 -34013606 - MLT2D LTR ERVL -8 406 378 261 0 0 0 chr20 38140276 38140305 -34013577 + (TG)n Simple_repeat Simple_repeat 2 30 0 2084 129 84 16 chr20 38140305 38140556 -34013326 - MLT2D LTR ERVL -36 378 88 2232 94 3 0 chr20 38140556 38140853 -34013029 + AluSq SINE Alu 1 298 -15 2084 129 84 16 chr20 38140853 38140948 -34012934 - MLT2D LTR ERVL -326 88 1 2093 110 0 0 chr20 38141073 38141383 -34012499 + AluSx SINE Alu 1 310 0 2091 101 0 14 chr20 38141524 38141820 -34012062 + AluSg SINE Alu 14 305 -5 1700 121 19 8 chr20 38141820 38142082 -34011800 + AluSx SINE Alu 43 309 -3 2281 86 20 0 chr20 38142207 38142508 -34011374 + AluSg SINE Alu 1 307 -3 2001 99 0 46 chr20 38142728 38143032 -34010850 - AluSx SINE Alu -18 294 5 270 0 0 0 chr20 38143048 38143078 -34010804 + (TA)n Simple_repeat Simple_repeat 2 31 0 1231 119 0 0 chr20 38143078 38143246 -34010636 - AluSp SINE Alu -12 301 131 2743 16 0 12 chr20 38143246 38143566 -34010316 - AluYb8 SINE Alu -2 316 1 468 332 75 44 chr20 38143585 38143880 -34010002 - L2 LINE L2 -32 3240 2937 816 140 21 21 chr20 38144659 38144802 -34009080 + AluJb SINE Alu 89 231 -81 244 204 20 0 chr20 38144805 38144854 -34009028 - Alu SINE Alu -14 288 239 237 65 0 0 chr20 38144885 38144916 -34008966 + (TC)n Simple_repeat Simple_repeat 2 32 0 855 191 13 19 chr20 38145253 38145410 -34008472 + FRAM SINE Alu 1 155 -21 2238 93 13 0 chr20 38145416 38145718 -34008164 + AluSq SINE Alu 1 306 -7 1031 156 0 0 chr20 38146470 38146630 -34007252 + AluJb SINE Alu 141 300 -12 248 311 82 22 chr20 38146820 38147003 -34006879 - MIR3 SINE MIR -14 194 1 203 224 79 13 chr20 38147313 38147389 -34006493 - L2 LINE L2 -188 3084 3004 214 283 7 164 chr20 38147851 38148003 -34005879 - L2 LINE L2 -1 3271 3144 1760 170 0 3 chr20 38148248 38148542 -34005340 + AluJo SINE Alu 1 293 -19 599 261 13 12 chr20 38149000 38149180 -34004702 - MIR SINE MIR -54 154 22 1832 107 6 78 chr20 38149750 38149922 -34003960 - AluSx SINE Alu -15 297 157 2067 120 0 0 chr20 38149922 38150205 -34003677 - AluSx SINE Alu -24 288 6 1832 107 6 78 chr20 38150205 38150351 -34003531 - AluSx SINE Alu -155 157 2 1730 92 4 8 chr20 38150397 38150636 -34003246 + AluSx SINE Alu 61 298 -14 1693 156 0 33 chr20 38150846 38151153 -34002729 + AluJo SINE Alu 1 297 -15 504 204 68 0 chr20 38151164 38151267 -34002615 - MER5B DNA MER1_type -52 126 17 323 220 179 36 chr20 38151267 38151435 -34002447 - MER112 DNA MER1_type -42 218 27 520 286 12 29 chr20 38151477 38151648 -34002234 + MER5A DNA MER1_type 17 184 -5 229 279 190 0 chr20 38152080 38152159 -34001723 - L2 LINE L2 -22 3250 3157 2286 72 16 3 chr20 38152829 38153134 -34000748 - AluY SINE Alu 0 311 3 1562 157 50 4 chr20 38153136 38153287 -34000595 - AluJb SINE Alu -18 294 151 2171 119 0 0 chr20 38153287 38153590 -34000292 - AluSc SINE Alu -6 303 1 1562 157 50 4 chr20 38153590 38153719 -34000163 - AluJb SINE Alu -161 151 1 929 141 0 0 chr20 38153723 38153858 -34000024 - AluSq/x SINE Alu -176 136 2 1901 139 24 0 chr20 38153858 38154152 -33999730 - AluJo SINE Alu -11 301 1 2088 117 3 7 chr20 38154178 38154485 -33999397 + AluSq SINE Alu 1 306 -7 291 241 63 51 chr20 38154607 38154686 -33999196 + L2 LINE L2 3193 3272 0 452 214 180 22 chr20 38155107 38155285 -33998597 - L2 LINE L2 -2 3311 3106 181 341 111 32 chr20 38155360 38155486 -33998396 - L2 LINE L2 -468 2846 2711 352 271 19 9 chr20 38155545 38155652 -33998230 - L2 LINE L2 -753 2561 2454 808 183 15 0 chr20 38155909 38156040 -33997842 + FLAM_A SINE Alu 1 133 0 1162 243 61 32 chr20 38156137 38156411 -33997471 - L1M4 LINE L1 -1831 4315 4050 2006 118 10 3 chr20 38156411 38156715 -33997167 - AluSx SINE Alu -6 306 1 1162 243 61 32 chr20 38156715 38156759 -33997123 - L1M4 LINE L1 -2096 4050 4009 2535 174 90 6 chr20 38156759 38157225 -33996657 + MLT1D LTR MaLR 1 505 0 1162 243 61 32 chr20 38157225 38157317 -33996565 - L1M4 LINE L1 -2137 4009 3892 1220 101 61 174 chr20 38157319 38157664 -33996218 - AluSg1 SINE Alu -3 306 1 1626 184 0 14 chr20 38157684 38157972 -33995910 - AluJb SINE Alu -28 284 1 27 0 0 0 chr20 38157984 38158011 -33995871 + AT_rich Low_complexity Low_complexity 1 27 0 832 57 0 0 chr20 38158045 38158172 -33995710 - AluSg/x SINE Alu 0 310 185 586 68 0 0 chr20 38158180 38158254 -33995628 + AluSc SINE Alu 219 292 -17 255 384 0 0 chr20 38158482 38158646 -33995236 + (CCA)n Simple_repeat Simple_repeat 3 166 0 2216 106 0 0 chr20 38158834 38159136 -33994746 + AluSg SINE Alu 1 302 -8 2125 103 27 0 chr20 38159291 38159592 -33994290 - AluSg SINE Alu 0 310 2 1052 171 45 67 chr20 38159593 38159770 -33994112 - AluJo SINE Alu -12 300 130 2304 85 0 7 chr20 38159770 38160075 -33993807 + AluY SINE Alu 1 303 -8 1052 171 45 67 chr20 38160075 38160166 -33993716 - AluJo SINE Alu -182 130 38 2206 103 0 0 chr20 38160166 38160458 -33993424 - AluSx SINE Alu -20 292 1 1776 160 23 7 chr20 38160458 38160758 -33993124 - AluSx SINE Alu -7 305 1 1907 129 13 13 chr20 38160767 38161078 -33992804 - AluSp SINE Alu -2 311 1 347 216 0 0 chr20 38161078 38161166 -33992716 - L1M4 LINE L1 -3307 2839 2752 1748 133 0 4 chr20 38161166 38161422 -33992460 + AluSg SINE Alu 1 255 -55 231 123 70 18 chr20 38161467 38161524 -33992358 - L1M4 LINE L1 -3804 2342 2283 2391 78 0 0 chr20 38161525 38161834 -33992048 - AluY SINE Alu 0 311 3 2192 73 3 3 chr20 38161839 38162126 -33991756 - AluSg SINE Alu -23 287 1 1156 142 0 0 chr20 38162138 38162314 -33991568 - AluJb SINE Alu 0 312 137 2029 113 6 29 chr20 38162315 38162626 -33991256 - AluSx SINE Alu -8 304 1 1481 131 14 0 chr20 38162637 38162859 -33991023 - AluSg/x SINE Alu -12 298 74 699 173 107 48 chr20 38162918 38163069 -33990813 + FRAM SINE Alu 1 162 -150 2277 79 0 19 chr20 38163069 38163385 -33990497 + AluSg SINE Alu 1 310 0 699 173 107 48 chr20 38163385 38163401 -33990481 + FRAM SINE Alu 162 176 0 790 243 176 10 chr20 38163621 38164024 -33989858 - L1ME3A LINE L1 -225 5945 5476 261 325 18 9 chr20 38164057 38164171 -33989711 - MIR SINE MIR 0 262 148 2154 113 0 7 chr20 38166466 38166766 -33987116 - AluSx SINE Alu -14 298 1 305 297 39 39 chr20 38168054 38168182 -33985700 - MER5B DNA MER1_type 0 178 51 198 0 0 0 chr20 38168186 38168208 -33985674 + (T)n Simple_repeat Simple_repeat 1 22 0 885 163 23 35 chr20 38168215 38168387 -33985495 - AluJb SINE Alu -142 170 1 1842 144 7 3 chr20 38168411 38168703 -33985179 + AluSx SINE Alu 1 293 -19 1812 179 60 22 chr20 38168703 38168986 -33984896 - L1MB7 LINE L1 -61 6123 5819 2251 64 20 17 chr20 38168986 38169282 -33984600 - AluY SINE Alu -14 297 1 1812 179 60 22 chr20 38169282 38169401 -33984481 - L1MB7 LINE L1 -365 5819 5706 2154 102 0 3 chr20 38169407 38169701 -33984181 - AluSq SINE Alu -20 293 1 1909 102 14 7 chr20 38170162 38170437 -33983445 + AluSq SINE Alu 1 277 -36 816 40 0 0 chr20 38170445 38170545 -33983337 + (TG)n Simple_repeat Simple_repeat 2 101 0 2090 125 0 3 chr20 38170837 38171148 -33982734 + AluSx SINE Alu 1 310 -2 1679 194 0 0 chr20 38171158 38171451 -33982431 + AluJb SINE Alu 2 294 -18 1769 81 121 15 chr20 38172172 38172444 -33981438 + AluSg SINE Alu 1 301 -9 216 235 163 31 chr20 38173158 38173256 -33980626 + MIR SINE MIR 152 262 0 27 29 0 0 chr20 38173758 38173792 -33980090 + GC_rich Low_complexity Low_complexity 1 34 0 228 330 39 19 chr20 38174412 38174515 -33979367 - MIR3 SINE MIR -46 162 58 577 219 82 0 chr20 38174596 38174742 -33979140 + MER5A DNA MER1_type 1 158 -31 189 0 0 0 chr20 38174801 38174822 -33979060 + (T)n Simple_repeat Simple_repeat 1 21 0 1732 102 4 16 chr20 38174827 38175072 -33978810 - AluSq SINE Alu -71 242 1 221 200 0 0 chr20 38175122 38175162 -33978720 - MIR SINE MIR -218 44 5 2264 105 0 16 chr20 38175273 38175588 -33978294 + AluSx SINE Alu 1 310 -2 252 223 40 25 chr20 38175856 38175910 -33977972 + MER4E LTR ERV1 1 53 -571 1527 151 3 108 chr20 38175910 38176082 -33977800 - AluJo SINE Alu -4 298 176 2032 144 0 7 chr20 38176082 38176380 -33977502 - AluSx SINE Alu -12 300 5 1527 151 3 108 chr20 38176380 38176539 -33977343 - AluJo SINE Alu -126 176 2 252 223 40 25 chr20 38176539 38176607 -33977275 + MER4E LTR ERV1 53 208 -416 * 2595 116 32 67 chr20 38176589 38176662 -33977220 + LTR29 LTR ERV1 137 211 -411 2249 68 57 0 chr20 38176662 38176941 -33976941 - AluY SINE Alu -16 295 1 2595 116 32 67 chr20 38176941 38177205 -33976677 + LTR29 LTR ERV1 211 454 -168 2354 107 0 3 chr20 38177205 38177505 -33976377 + AluSp SINE Alu 1 299 -14 2595 116 32 67 chr20 38177505 38177658 -33976224 + LTR29 LTR ERV1 454 611 -11 184 270 104 93 chr20 38177881 38178151 -33975731 - L2 LINE L2 -453 2861 2589 2544 74 0 13 chr20 38178181 38178493 -33975389 - AluSq SINE Alu -5 308 1 2018 144 3 3 chr20 38178520 38178818 -33975064 - AluSx SINE Alu -14 298 1 1821 143 3 49 chr20 38178838 38179145 -33974737 + AluJo SINE Alu 1 293 -19 3728 144 90 11 chr20 38179148 38179785 -33974097 - L1MB3 LINE L1 0 6183 5479 2405 95 0 0 chr20 38179785 38180081 -33973801 - AluSg SINE Alu -14 296 1 3728 144 90 11 chr20 38180081 38180180 -33973702 - L1MB3 LINE L1 -704 5479 5389 2463 94 13 0 chr20 38180211 38180519 -33973363 - AluSx SINE Alu 0 312 1 181 304 0 0 chr20 38181258 38181314 -33972568 - MIR SINE MIR -7 255 200 2084 138 14 0 chr20 38181317 38181614 -33972268 - AluSx SINE Alu -11 301 1 382 315 148 7 chr20 38181913 38182062 -33971820 + MER5A DNA MER1_type 19 188 -1 222 263 0 39 chr20 38182065 38182147 -33971735 + MIR SINE MIR 49 125 -99 488 253 82 14 chr20 38182176 38182322 -33971560 - MIR SINE MIR -61 201 46 2378 99 0 0 chr20 38182495 38182798 -33971084 - AluSg SINE Alu -7 303 1 243 0 0 0 chr20 38182890 38182917 -33970965 + (A)n Simple_repeat Simple_repeat 1 27 0 205 125 21 42 chr20 38182971 38183019 -33970863 + L2 LINE L2 3040 3086 -227 1076 108 0 25 chr20 38183038 38183219 -33970663 - AluSc SINE Alu 0 303 127 2355 101 0 0 chr20 38183316 38183612 -33970270 + AluSg SINE Alu 1 296 -14 2366 74 7 10 chr20 38183871 38184168 -33969714 - AluSx SINE Alu -16 296 1 25 31 0 0 chr20 38184621 38184653 -33969229 + AT_rich Low_complexity Low_complexity 1 32 0 825 173 8 0 chr20 38184665 38184798 -33969084 - FRAM SINE Alu -35 141 8 2384 90 0 7 chr20 38184864 38185165 -33968717 + AluSc SINE Alu 1 299 -10 484 242 182 61 chr20 38185282 38185513 -33968369 - MLT1K LTR MaLR -30 558 300 1664 108 52 8 chr20 38186638 38186917 -33966965 + AluSg1 SINE Alu 43 309 0 200 227 0 0 chr20 38187272 38187316 -33966566 + A-rich Low_complexity Low_complexity 1 44 0 1803 180 20 0 chr20 38188843 38189137 -33964745 + AluJo SINE Alu 1 300 -12 1111 113 0 0 chr20 38189231 38189372 -33964510 + AluSq SINE Alu 84 224 -89 1673 142 4 11 chr20 38189445 38189706 -33964176 + AluJb SINE Alu 1 259 -53 1931 173 0 0 chr20 38189713 38190008 -33963874 + AluJo SINE Alu 1 295 -17 2456 88 0 0 chr20 38190011 38190307 -33963575 + AluSg SINE Alu 1 296 -14 306 289 55 31 chr20 38190355 38190483 -33963399 - L2 LINE L2 -6 3266 3136 1196 122 29 6 chr20 38191174 38191346 -33962536 + AluSc SINE Alu 132 307 -2 325 268 95 39 chr20 38191428 38191607 -33962275 - MIR SINE MIR -53 209 21 2073 151 0 16 chr20 38191614 38191919 -33961963 - AluJb SINE Alu -12 300 1 388 250 191 12 chr20 38191919 38192081 -33961801 - MIR SINE MIR -38 224 33 2106 123 3 30 chr20 38192987 38193288 -33960594 - AluSx SINE Alu -19 293 1 181 344 0 0 chr20 38193812 38193876 -33960006 + L2 LINE L2 3193 3256 -16 290 239 23 0 chr20 38194121 38194209 -33959673 + L1MC5 LINE L1 7808 7897 -64 1571 131 131 8 chr20 38194217 38194485 -33959397 - AluSx SINE Alu 0 302 2 2150 123 7 10 chr20 38194485 38194787 -33959095 - AluSp SINE Alu -12 301 1 2216 103 17 0 chr20 38194858 38195149 -33958733 + AluSx SINE Alu 1 296 -16 251 230 40 54 chr20 38195284 38195358 -33958524 - L2 LINE L2 -9 3304 3232 2059 138 3 16 chr20 38195616 38195784 -33958098 - AluSx SINE Alu -11 301 137 2266 129 0 0 chr20 38195784 38196087 -33957795 - AluSx SINE Alu -9 303 1 2059 138 3 16 chr20 38196087 38196223 -33957659 - AluSx SINE Alu -175 137 1 913 204 0 0 chr20 38196224 38196386 -33957496 - FRAM SINE Alu 0 166 5 1470 170 43 22 chr20 38196400 38196708 -33957174 - AluSx SINE Alu 0 314 1 2239 105 7 7 chr20 38197442 38197748 -33956134 - AluSp SINE Alu -7 306 1 2156 138 0 3 chr20 38197773 38198084 -33955798 + AluSx SINE Alu 1 310 -2 2328 82 3 10 chr20 38198566 38198859 -33955023 - AluSp SINE Alu -22 291 1 2014 141 7 13 chr20 38198859 38199165 -33954717 - AluJo SINE Alu -1 311 8 262 219 62 52 chr20 38199204 38199300 -33954582 - MIR SINE MIR -79 183 87 185 312 29 65 chr20 38199832 38199970 -33953912 - MIR SINE MIR -13 249 117 2430 65 0 3 chr20 38200231 38200521 -33953361 + AluSg SINE Alu 1 289 -21 344 188 20 59 chr20 38200611 38200712 -33953170 - MIR SINE MIR -77 131 35 1963 152 7 7 chr20 38201261 38201571 -33952311 - AluSx SINE Alu -2 310 1 474 217 100 0 chr20 38201571 38201691 -33952191 - MIR SINE MIR -44 218 87 885 170 42 129 chr20 38201755 38201888 -33951994 + AluJo SINE Alu 24 167 -145 2435 89 10 0 chr20 38201888 38202191 -33951691 + AluSc SINE Alu 1 306 -3 2167 115 0 36 chr20 38202191 38202522 -33951360 + AluSx SINE Alu 1 320 0 885 170 42 129 chr20 38202522 38202697 -33951185 + AluJo SINE Alu 165 307 -5 1685 194 4 0 chr20 38202698 38202976 -33950906 + AluJb SINE Alu 2 280 -32 475 176 101 8 chr20 38202992 38203111 -33950771 + L1MB8 LINE L1 6049 6178 0 228 231 15 46 chr20 38203436 38203501 -33950381 + MIR SINE MIR 85 147 -61 2322 116 3 0 chr20 38203581 38203891 -33949991 - AluSx SINE Alu -1 311 1 240 35 0 0 chr20 38205197 38205226 -33948656 + (GGGGA)n Simple_repeat Simple_repeat 1 29 0 21 0 0 0 chr20 38205241 38205262 -33948620 + GC_rich Low_complexity Low_complexity 1 21 0 38 39 0 0 chr20 38205994 38206046 -33947836 + GC_rich Low_complexity Low_complexity 1 52 0 34 79 0 0 chr20 38206206 38206282 -33947600 + GC_rich Low_complexity Low_complexity 1 76 0 187 243 0 0 chr20 38207405 38207442 -33946440 - MIR SINE MIR -60 148 112 296 284 89 41 chr20 38208043 38208212 -33945670 + L1MC/D LINE L1 5588 5764 -2044 2160 106 3 23 chr20 38208418 38208721 -33945161 - AluSx SINE Alu -2 310 14 2373 92 3 0 chr20 38209107 38209400 -33944482 - AluSq SINE Alu -19 294 1 1826 162 11 8 chr20 38210121 38210591 -33943291 + Tigger1 DNA MER2_type 1 536 -1882 767 149 0 15 chr20 38210600 38210734 -33943148 - FLAM_C SINE Alu -1 132 1 1274 122 0 0 chr20 38210764 38210936 -33942946 + AluSg/x SINE Alu 129 300 -12 1835 145 21 7 chr20 38210942 38211225 -33942657 + AluJo SINE Alu 1 287 -25 941 119 0 8 chr20 38211227 38211361 -33942521 + AluSq/x SINE Alu 1 133 -179 1328 120 56 4 chr20 38211362 38211595 -33942287 + Tigger1 DNA MER2_type 578 822 -1596 2471 90 3 3 chr20 38211607 38211917 -33941965 - AluSx SINE Alu -2 310 1 1017 126 0 0 chr20 38211917 38212052 -33941830 - AluSq/x SINE Alu -178 135 1 425 267 102 37 chr20 38212161 38212348 -33941534 - HAL1 LINE L1 -1881 626 428 1703 138 84 0 chr20 38212386 38212647 -33941235 - AluSx SINE Alu -7 305 23 225 257 95 0 chr20 38212649 38212723 -33941159 - MIR SINE MIR -125 137 57 2036 205 20 70 chr20 38212741 38213024 -33940858 - L1M4 LINE L1 -2833 3313 3018 2568 71 0 0 chr20 38213024 38213334 -33940548 - AluY SINE Alu -1 310 1 2036 205 20 70 chr20 38213334 38213370 -33940512 - L1M4 LINE L1 -3128 3018 2982 2215 112 13 19 chr20 38213370 38213684 -33940198 + AluSx SINE Alu 1 312 0 2036 205 20 70 chr20 38213684 38213696 -33940186 - L1M4 LINE L1 -3164 2982 2971 1546 189 42 7 chr20 38213696 38213981 -33939901 + AluJo SINE Alu 1 295 -17 2036 205 20 70 chr20 38213981 38214311 -33939571 - L1M4 LINE L1 -3175 2971 2687 1805 180 17 0 chr20 38214311 38214611 -33939271 + AluJb SINE Alu 3 307 -5 2036 205 20 70 chr20 38214611 38214679 -33939203 - L1M4 LINE L1 -3459 2687 2617 320 217 0 0 chr20 38214805 38214874 -33939008 - L1M4 LINE L1 -3463 2683 2615 316 232 0 0 chr20 38214871 38214940 -33938942 - L1M4 LINE L1 -3463 2683 2615 * 325 203 0 0 chr20 38214937 38215006 -33938876 - L1M4 LINE L1 -3463 2683 2615 325 203 0 0 chr20 38215003 38215072 -33938810 - L1M4 LINE L1 -3463 2683 2615 315 232 0 0 chr20 38215135 38215204 -33938678 - L1M4 LINE L1 -3463 2683 2615 325 203 0 0 chr20 38215264 38215333 -33938549 - L1M4 LINE L1 -3463 2683 2615 * 340 203 0 0 chr20 38215330 38215399 -33938483 - L1M4 LINE L1 -3463 2683 2615 987 210 35 25 chr20 38215449 38215735 -33938147 - L1M4 LINE L1 -3473 2673 2385 1702 149 111 25 chr20 38216061 38216423 -33937459 + MSTD LTR MaLR 1 393 -3 1130 144 12 0 chr20 38216948 38217108 -33936774 - AluSg/x SINE Alu -20 292 131 1374 192 16 55 chr20 38217155 38217462 -33936420 - AluJb SINE Alu -14 298 4 1611 183 70 0 chr20 38217864 38218137 -33935745 - AluJb SINE Alu -20 292 1 1253 123 0 0 chr20 38218169 38218331 -33935551 + AluSg/x SINE Alu 135 296 -16 2361 88 3 10 chr20 38218342 38218647 -33935235 - AluSq SINE Alu -10 303 1 1415 245 33 6 chr20 38218772 38219135 -33934747 + L1ME1 LINE L1 5659 6031 -135 2307 113 0 3 chr20 38219182 38219491 -33934391 - AluSg SINE Alu -2 308 1 2406 103 0 22 chr20 38219494 38219813 -33934069 - AluSx SINE Alu 0 312 1 943 149 39 39 chr20 38219816 38219988 -33933894 - AluJb SINE Alu -3 309 135 2172 106 55 0 chr20 38219988 38220280 -33933602 - AluSx SINE Alu -4 308 1 2548 70 0 0 chr20 38220534 38220835 -33933047 - AluY SINE Alu -10 301 1 837 130 16 0 chr20 38220846 38220969 -33932913 - AluJb SINE Alu -187 125 1 661 201 0 22 chr20 38221001 38221135 -33932747 + FLAM_A SINE Alu 1 131 -2 345 279 9 36 chr20 38221629 38221740 -33932142 + MIR SINE MIR 44 151 -111 1860 187 0 0 chr20 38221814 38222124 -33931758 - AluJb SINE Alu -2 310 1 2131 112 28 0 chr20 38222147 38222433 -33931449 - AluSq SINE Alu -19 294 1 1932 121 66 0 chr20 38222433 38222706 -33931176 - AluSx SINE Alu -21 291 1 294 161 32 16 chr20 38223228 38223242 -33930640 - MER46A DNA MER2_type -77 159 145 932 161 65 0 chr20 38223242 38223410 -33930472 + MER46B DNA MER2_type 1 54 -182 1480 130 0 5 chr20 38223411 38223618 -33930264 + AluJb SINE Alu 85 290 -22 2305 92 7 0 chr20 38223726 38224019 -33929863 - AluSp SINE Alu -16 297 3 302 333 91 23 chr20 38224514 38224880 -33929002 - L1ME LINE L1 -355 5809 5406 378 200 0 0 chr20 38224881 38224946 -33928936 - MER2 DNA MER2_type 0 345 281 518 129 24 0 chr20 38224948 38225033 -33928849 + FLAM_A SINE Alu 47 133 -9 2323 111 3 0 chr20 38225038 38225345 -33928537 + AluSp SINE Alu 6 313 0 2278 108 0 0 chr20 38225369 38225681 -33928201 + AluSx SINE Alu 1 312 0 712 152 0 29 chr20 38225728 38225866 -33928016 - AluJo/FRAM SINE Alu -1 311 178 2240 116 0 0 chr20 38225866 38226160 -33927722 - AluSx SINE Alu -18 294 1 2148 123 3 3 chr20 38226545 38226837 -33927045 + AluSx SINE Alu 1 292 -20 714 197 0 23 chr20 38226979 38227111 -33926771 + FLAM_A SINE Alu 1 129 -4 2254 108 19 3 chr20 38227113 38227420 -33926462 + AluSq SINE Alu 1 312 -1 1931 148 11 0 chr20 38227424 38227708 -33926174 + AluJo SINE Alu 1 287 -25 469 319 54 51 chr20 38227780 38227821 -33926061 - L1ME LINE L1 -746 5400 5361 2388 80 3 3 chr20 38227821 38228121 -33925761 + AluSc SINE Alu 1 300 -9 469 319 54 51 chr20 38228121 38228392 -33925490 - L1ME LINE L1 -785 5361 5087 430 246 57 16 chr20 38230937 38231059 -33922823 + MIR SINE MIR 23 149 -113 659 225 45 56 chr20 38231961 38232139 -33921743 - MIR SINE MIR -59 203 28 716 237 53 1 chr20 38232252 38232442 -33921440 + MIR SINE MIR 8 208 -18 2028 117 57 0 chr20 38232805 38233087 -33920795 + AluSg SINE Alu 1 298 -12 190 250 138 12 chr20 38233527 38233607 -33920275 + MIR3 SINE MIR 112 201 -7 189 205 0 0 chr20 38233682 38233721 -33920161 + MIR SINE MIR 107 145 -63 2391 68 34 0 chr20 38233759 38234053 -33919829 - AluY SINE Alu -7 304 1 2598 47 0 0 chr20 38234188 38234486 -33919396 - AluY SINE Alu -13 298 1 344 326 95 0 chr20 38235000 38235147 -33918735 + MIR SINE MIR 78 238 -24 21 36 0 0 chr20 38238209 38238237 -33915645 + GC_rich Low_complexity Low_complexity 1 28 0 29 28 0 0 chr20 38238256 38238292 -33915590 + GC_rich Low_complexity Low_complexity 1 36 0 679 280 143 0 chr20 38238974 38239331 -33914551 - L2 LINE L2 -569 2745 2338 1086 255 64 22 chr20 38239331 38239466 -33914416 - L1MD3 LINE L1 0 8040 7912 224 57 0 29 chr20 38239466 38239501 -33914381 + (CATATA)n Simple_repeat Simple_repeat 1 34 0 1086 255 64 22 chr20 38239501 38239784 -33914098 - L1MD3 LINE L1 -128 7912 7616 300 91 18 0 chr20 38239799 38239854 -33914028 - L1MB3 LINE L1 -1 6182 6127 893 71 0 0 chr20 38239854 38239966 -33913916 - AluY SINE Alu -10 301 190 1657 163 3 25 chr20 38239968 38240288 -33913594 - L1MB3 LINE L1 -50 6133 5821 1561 177 3 53 chr20 38240302 38240455 -33913427 - AluJo SINE Alu -28 284 152 2530 56 0 20 chr20 38240455 38240759 -33913123 - AluY SINE Alu -13 298 1 1561 177 3 53 chr20 38240759 38240904 -33912978 - AluJo SINE Alu -160 152 1 272 148 0 98 chr20 38240904 38240965 -33912917 - AluJb SINE Alu -161 141 87 1438 124 25 106 chr20 38240969 38241291 -33912591 - L1MB3 LINE L1 -362 5821 5526 2155 130 0 3 chr20 38241291 38241592 -33912290 + AluSx SINE Alu 1 300 -12 392 228 106 16 chr20 38241592 38241715 -33912167 - L1MB3 LINE L1 -813 5333 5200 2704 194 44 47 chr20 38241718 38241973 -33911909 - L1MB7 LINE L1 -2 6182 5928 1961 136 38 0 chr20 38241973 38242260 -33911622 - AluSx SINE Alu -14 298 1 2704 194 44 47 chr20 38242260 38242707 -33911175 - L1MB7 LINE L1 -256 5928 5482 632 126 10 10 chr20 38242708 38242811 -33911071 - FLAM_A SINE Alu -18 124 22 2550 175 71 73 chr20 38242826 38242981 -33910901 - L1MB7 LINE L1 -690 5484 5330 2324 109 3 3 chr20 38242981 38243292 -33910590 + AluSq SINE Alu 1 311 -2 2550 175 71 73 chr20 38243292 38243476 -33910406 - L1MB7 LINE L1 -844 5330 5147 2379 106 0 3 chr20 38243476 38243787 -33910095 - AluSg SINE Alu 0 310 1 2550 175 71 73 chr20 38243787 38243914 -33909968 - L1MB7 LINE L1 -1027 5147 5021 2665 64 0 0 chr20 38243914 38244225 -33909657 - AluY SINE Alu 0 311 1 2550 175 71 73 chr20 38244225 38244271 -33909611 - L1MB7 LINE L1 -1153 5021 4976 1782 60 0 0 chr20 38244271 38244513 -33909369 - AluY SINE Alu 0 324 83 2550 175 71 73 chr20 38244513 38244778 -33909104 - L1MB7 LINE L1 -1198 4976 4692 2008 169 0 0 chr20 38244778 38245073 -33908809 - AluJb SINE Alu -17 295 1 2550 175 71 73 chr20 38245073 38245247 -33908635 - L1MB7 LINE L1 -1482 4692 4519 442 166 77 105 chr20 38245253 38245324 -33908558 - L1MC4 LINE L1 -740 7302 7231 1721 106 121 19 chr20 38245324 38245589 -33908293 - AluSx SINE Alu -20 292 1 442 166 77 105 chr20 38245589 38245649 -33908233 - L1MC4 LINE L1 -811 7231 7175 2338 99 0 0 chr20 38245649 38245943 -33907939 - AluSx SINE Alu -18 294 1 442 166 77 105 chr20 38245943 38245991 -33907891 - L1MC4 LINE L1 -867 7175 7127 409 219 138 0 chr20 38245997 38246120 -33907762 - L2 LINE L2 -977 2337 2198 2129 125 3 10 chr20 38246343 38246639 -33907243 - AluSx SINE Alu -18 294 1 193 234 0 0 chr20 38246817 38246864 -33907018 - L2 LINE L2 -5 3308 3262 2539 61 0 16 chr20 38247253 38247563 -33906319 - AluY SINE Alu -6 305 1 478 268 63 142 chr20 38248205 38248340 -33905542 + L1MC4 LINE L1 7436 7580 -462 2321 102 0 9 chr20 38248340 38248655 -33905227 + AluSx SINE Alu 1 312 0 478 268 63 142 chr20 38248655 38248743 -33905139 + L1MC4 LINE L1 7580 7673 -369 2054 141 0 13 chr20 38248743 38249062 -33904820 + AluJb SINE Alu 1 315 0 478 268 63 142 chr20 38249062 38249456 -33904426 + L1MC4 LINE L1 7673 8006 -36 2148 72 76 3 chr20 38250090 38250381 -33903501 + AluSx SINE Alu 1 312 0 587 170 31 37 chr20 38251058 38251220 -33902662 - MIR SINE MIR -50 212 49 2632 58 3 0 chr20 38254455 38254765 -33899117 - AluY SINE Alu 0 311 1 2266 78 7 27 chr20 38254786 38255080 -33898802 - AluSp SINE Alu -25 288 1 21 0 0 0 chr20 38255087 38255108 -33898774 + AT_rich Low_complexity Low_complexity 1 21 0 343 320 164 41 chr20 38255666 38255741 -33898141 + L1 LINE L1 3364 3428 -2718 1962 134 17 7 chr20 38255741 38256031 -33897851 + AluSx SINE Alu 1 293 -19 343 320 164 41 chr20 38256031 38256370 -33897512 + L1 LINE L1 3428 3829 -2317 332 109 18 0 chr20 38256404 38256459 -33897423 + Alu SINE Alu 2 47 -254 631 174 208 20 chr20 38256459 38256608 -33897274 + AluSg/x SINE Alu 110 286 -23 968 197 80 11 chr20 38256635 38256823 -33897059 + AluJb SINE Alu 78 278 -34 1813 121 16 4 chr20 38256926 38257182 -33896700 + AluSg SINE Alu 41 299 -11 1845 158 0 30 chr20 38257245 38257548 -33896334 + AluJo SINE Alu 5 298 -14 864 106 0 45 chr20 38258448 38258580 -33895302 + AluSq/x SINE Alu 8 133 -179 2037 117 46 0 chr20 38258582 38258863 -33895019 + AluSx SINE Alu 1 294 -18 2024 168 73 88 chr20 38258863 38259055 -33894827 + L1M3 LINE L1 5035 5228 -952 2077 133 3 7 chr20 38259055 38259349 -33894533 + AluSx SINE Alu 1 293 -19 2024 168 73 88 chr20 38259349 38259620 -33894262 + L1M3 LINE L1 5228 5501 -679 1634 167 4 25 chr20 38259620 38259895 -33893987 + AluJo SINE Alu 14 282 -30 207 0 0 0 chr20 38259898 38259921 -33893961 + (CAAA)n Simple_repeat Simple_repeat 3 25 0 2024 168 73 88 chr20 38259921 38260253 -33893629 + L1M3 LINE L1 5503 5792 -388 479 253 176 47 chr20 38260276 38260412 -33893470 + L1M4 LINE L1 2651 2768 -3378 1612 167 0 60 chr20 38260412 38260572 -33893310 - AluJb SINE Alu -20 292 157 2408 82 0 3 chr20 38260572 38260866 -33893016 - AluSg SINE Alu -17 293 1 1612 167 0 60 chr20 38260866 38261005 -33892877 - AluJb SINE Alu -155 157 11 479 253 176 47 chr20 38261005 38261318 -33892564 + L1M4 LINE L1 2768 3158 -2988 2015 115 20 20 chr20 38261462 38261757 -33892125 - AluSq SINE Alu -17 296 2 449 269 110 13 chr20 38261771 38261998 -33891884 + L1M4 LINE L1 3589 3837 -2309 1606 104 0 0 chr20 38262135 38262336 -33891546 + AluSx SINE Alu 1 201 -111 2076 103 7 0 chr20 38262336 38262605 -33891277 - AluSq SINE Alu -40 273 1 609 144 93 36 chr20 38262637 38262776 -33891106 + AluY SINE Alu 2 148 -163 803 153 0 0 chr20 38262782 38262893 -33890989 - AluJb SINE Alu -201 111 1 2337 101 7 3 chr20 38263010 38263317 -33890565 - AluSx SINE Alu -4 308 1 468 222 52 44 chr20 38263486 38263620 -33890262 + MLT1J LTR MaLR 31 188 -297 809 178 7 0 chr20 38263977 38264112 -33889770 + AluJo SINE Alu 1 136 -176 308 284 126 26 chr20 38264189 38264537 -33889345 + L1ME LINE L1 2154 2536 -3610 1692 251 212 56 chr20 38264672 38264988 -33888894 + L2 LINE L2 1295 1560 -1754 1766 171 7 17 chr20 38264988 38265280 -33888602 + AluJo SINE Alu 1 289 -23 1692 251 212 56 chr20 38265280 38266119 -33887763 + L2 LINE L2 1560 2721 -593 2995 9 0 0 chr20 38266119 38266435 -33887447 - AluYb8 SINE Alu -2 316 1 1692 251 212 56 chr20 38266435 38266526 -33887356 + L2 LINE L2 2721 2796 -518 1338 156 121 0 chr20 38266531 38266762 -33887120 + AluJb SINE Alu 54 312 0 1017 276 115 26 chr20 38266771 38267251 -33886631 + L2 LINE L2 2792 3311 -2 2521 83 0 0 chr20 38267352 38267654 -33886228 + AluY SINE Alu 1 302 -9 441 280 40 98 chr20 38267736 38267810 -33886072 + L1ME LINE L1 4290 4367 -1779 2261 120 0 0 chr20 38267810 38268109 -33885773 - AluSx SINE Alu -13 299 1 441 280 40 98 chr20 38268109 38268198 -33885684 + L1ME LINE L1 4367 4460 -1686 1870 180 0 3 chr20 38268198 38268487 -33885395 + AluJo SINE Alu 1 288 -24 441 280 40 98 chr20 38268487 38268844 -33885038 + L1ME LINE L1 4460 4781 -1365 1396 122 0 51 chr20 38268845 38269059 -33884823 + AluSx SINE Alu 1 203 -109 510 117 0 0 chr20 38269059 38269136 -33884746 + AluSg/x SINE Alu 67 143 -167 2078 140 10 3 chr20 38269137 38269445 -33884437 + AluSx SINE Alu 1 310 -2 2154 89 71 0 chr20 38269565 38269846 -33884036 + AluSp SINE Alu 1 301 -12 402 316 82 45 chr20 38269897 38269939 -33883943 + L1ME LINE L1 5258 5297 -873 1664 181 0 52 chr20 38269939 38270101 -33883781 - AluJo SINE Alu -17 295 155 2464 93 0 0 chr20 38270101 38270413 -33883469 - AluSx SINE Alu 0 312 1 1664 181 0 52 chr20 38270413 38270559 -33883323 - AluJo SINE Alu -157 155 3 402 316 82 45 chr20 38270559 38270980 -33882902 + L1ME LINE L1 5297 5744 -426 2502 73 7 3 chr20 38270980 38271282 -33882600 + AluSp SINE Alu 7 309 -4 402 316 82 45 chr20 38271282 38271327 -33882555 + L1ME LINE L1 5744 5786 -384 1628 254 91 26 chr20 38271456 38272022 -33881860 + MLT1G LTR MaLR 1 570 -20 189 290 200 10 chr20 38272022 38272122 -33881760 + L2 LINE L2 2917 3035 -237 2261 109 0 0 chr20 38272174 38272488 -33881394 + AluSx SINE Alu 1 314 0 2648 137 39 2 chr20 38272589 38273050 -33880832 + L1MB3 LINE L1 5706 6183 0 805 187 53 0 chr20 38273525 38273696 -33880186 + MER33 DNA MER1_type 1 180 -144 911 152 20 81 chr20 38273697 38273894 -33879988 + Tigger2a DNA MER2_type 1 185 -249 2069 143 0 13 chr20 38273894 38274209 -33879673 - AluJo SINE Alu -1 311 1 3544 153 135 26 chr20 38274359 38274415 -33879467 + L1MB4 LINE L1 5111 5160 -1020 2345 100 0 3 chr20 38274415 38274714 -33879168 + AluSg SINE Alu 1 298 -12 3544 153 135 26 chr20 38274714 38275625 -33878257 + L1MB4 LINE L1 5160 6178 -2 2405 149 74 42 chr20 38275617 38275907 -33877975 + L1MB7 LINE L1 5592 5871 -313 * 2381 60 0 25 chr20 38275907 38276222 -33877660 + AluY SINE Alu 1 307 -4 2405 149 74 42 chr20 38276222 38276490 -33877392 + L1MB7 LINE L1 5871 6175 -9 2229 99 7 3 chr20 38276677 38276980 -33876902 + AluSx SINE Alu 1 304 -8 21 57 0 0 chr20 38277006 38277041 -33876841 + AT_rich Low_complexity Low_complexity 1 35 0 1629 175 0 10 chr20 38277052 38277343 -33876539 + AluJo SINE Alu 3 290 -22 576 285 131 33 chr20 38277400 38277789 -33876093 + HAL1 LINE L1 2044 2470 -37 189 164 0 127 chr20 38278298 38278336 -33875546 + L2 LINE L2 3223 3254 -18 2296 90 0 3 chr20 38278336 38278637 -33875245 + AluSx SINE Alu 1 300 -12 189 164 0 127 chr20 38278637 38278653 -33875229 + L2 LINE L2 3254 3270 -2 601 299 55 14 chr20 38278666 38278883 -33874999 - MIR SINE MIR -26 236 11 237 292 0 0 chr20 38279935 38280000 -33873882 + GA-rich Low_complexity Low_complexity 5 69 0 243 88 0 0 chr20 38280310 38280344 -33873538 + (CGGG)n Simple_repeat Simple_repeat 3 36 0 2181 92 3 0 chr20 38283530 38283858 -33870024 + AluSp SINE Alu 1 329 0 421 148 99 12 chr20 38284407 38284521 -33869361 + L1MD2 LINE L1 5432 5559 -597 1262 122 5 0 chr20 38284529 38284717 -33869165 + AluSq SINE Alu 120 308 -5 862 150 8 0 chr20 38284737 38284870 -33869012 - AluJo SINE Alu -178 134 1 1790 150 86 48 chr20 38284870 38285290 -33868592 + L1MD2 LINE L1 5924 6359 0 379 312 78 7 chr20 38285808 38285962 -33867920 - MIR SINE MIR -31 231 67 216 0 0 0 chr20 38286022 38286046 -33867836 + (GGCTG)n Simple_repeat Simple_repeat 1 24 0 252 220 0 34 chr20 38286470 38286529 -33867353 + MIR SINE MIR 34 90 -172 206 203 51 38 chr20 38287565 38287644 -33866238 + L2 LINE L2 2907 2986 -327 1960 88 56 52 chr20 38288484 38288789 -33865093 - AluSg SINE Alu -4 306 1 2126 117 10 0 chr20 38289544 38289852 -33864030 + AluSx SINE Alu 1 311 -1 2410 206 135 19 chr20 38290410 38290830 -33863052 - MER82 DNA MER2_type 0 653 145 2037 103 35 7 chr20 38290830 38291120 -33862762 + AluSq SINE Alu 1 298 -15 2410 206 135 19 chr20 38291120 38291283 -33862599 - MER82 DNA MER2_type -508 145 2 230 333 102 34 chr20 38291294 38291441 -33862441 - MIR SINE MIR -66 196 40 2472 61 0 0 chr20 38291484 38291781 -33862101 - AluSg SINE Alu -12 298 2 772 262 137 61 chr20 38292725 38292790 -33861092 + L2 LINE L2 2698 2757 -556 2084 110 0 3 chr20 38292790 38293082 -33860800 + AluSq SINE Alu 1 291 -22 772 262 137 61 chr20 38293082 38293581 -33860301 + L2 LINE L2 2757 3312 -1 209 350 0 48 chr20 38293584 38293687 -33860195 - MIR SINE MIR -115 147 50 262 326 35 21 chr20 38294034 38294178 -33859704 + MIR3 SINE MIR 7 152 -56 248 194 134 15 chr20 38294237 38294304 -33859578 - Charlie8 DNA MER1_type -2226 191 117 918 138 28 28 chr20 38294308 38294332 -33859550 + L1MA4 LINE L1 6116 6139 -161 1526 132 128 0 chr20 38294332 38294598 -33859284 - AluJo SINE Alu -12 300 1 918 138 28 28 chr20 38294598 38294754 -33859128 + L1MA4 LINE L1 6138 6296 -4 369 277 59 17 chr20 38295550 38295669 -33858213 - MIR SINE MIR -126 136 13 2112 138 0 0 chr20 38296730 38297042 -33856840 + AluSx SINE Alu 1 312 0 187 326 139 0 chr20 38298028 38298114 -33855768 - L2 LINE L2 -41 3272 3175 541 249 96 74 chr20 38298268 38298497 -33855385 + L3 LINE CR1 1178 1411 -166 1725 163 14 3 chr20 38298690 38298979 -33854903 - AluJo SINE Alu -20 292 1 1703 156 7 24 chr20 38298982 38299270 -33854612 - AluJo SINE Alu -20 292 10 213 184 20 20 chr20 38299586 38299635 -33854247 + MIR SINE MIR 102 150 -112 196 232 258 32 chr20 38299970 38300160 -33853722 + L2 LINE L2 2832 3064 -208 229 356 106 0 chr20 38300813 38300917 -33852965 - MIR SINE MIR -72 190 76 188 276 69 0 chr20 38301316 38301374 -33852508 + MIR3 SINE MIR 99 160 -48 424 272 139 6 chr20 38301375 38301548 -33852334 + MER117 DNA MER1_type 2 197 0 288 300 39 1 chr20 38301782 38301880 -33852002 + MIR SINE MIR 42 144 -77 263 275 0 0 chr20 38302006 38302075 -33851807 - MIR SINE MIR -63 145 77 2153 102 20 0 chr20 38302309 38302612 -33851270 + AluSx SINE Alu 3 311 -1 2106 97 50 7 chr20 38302709 38303009 -33850873 + AluSp SINE Alu 1 313 0 1059 162 19 19 chr20 38303026 38303073 -33850809 + L1MB3 LINE L1 5925 5971 -212 2193 107 0 3 chr20 38303073 38303383 -33850499 + AluSx SINE Alu 1 309 -3 1059 162 19 19 chr20 38303383 38303551 -33850331 + L1MB3 LINE L1 5970 6140 -43 2162 73 38 0 chr20 38303553 38303841 -33850041 + AluSx SINE Alu 1 299 -13 2173 105 3 0 chr20 38304193 38304489 -33849393 + AluSg SINE Alu 1 297 -13 204 330 117 35 chr20 38304635 38304865 -33849017 + L2 LINE L2 3026 3274 -39 789 268 56 9 chr20 38305574 38305805 -33848077 - MIR SINE MIR -6 256 15 729 168 24 24 chr20 38305953 38306078 -33847804 + FLAM_C SINE Alu 2 126 -17 280 315 45 9 chr20 38306308 38306419 -33847463 - MIR SINE MIR -71 137 23 253 277 24 122 chr20 38307000 38307170 -33846712 + MIR3 SINE MIR 1 157 -51 1941 155 7 3 chr20 38307179 38307482 -33846400 - AluJb SINE Alu -8 304 1 2094 94 0 24 chr20 38308179 38308494 -33845388 - AluSg SINE Alu 0 309 2 455 355 47 22 chr20 38308640 38309001 -33844881 + L1MC4a LINE L1 5568 5937 -1871 232 309 154 18 chr20 38309571 38309681 -33844201 + MIR3 SINE MIR 78 202 -6 2394 87 0 0 chr20 38309920 38310231 -33843651 - AluSx SINE Alu -1 311 1 370 267 17 67 chr20 38310435 38310555 -33843327 + L2 LINE L2 3155 3268 -4 316 295 23 39 chr20 38310567 38310696 -33843186 + MIR SINE MIR 85 211 -51 319 347 32 0 chr20 38311790 38311914 -33841968 + MIR SINE MIR 124 251 -11 210 328 61 44 chr20 38312431 38312611 -33841271 + L2 LINE L2 3089 3271 -42 1080 66 18 0 chr20 38312622 38312789 -33841093 + (GA)n Simple_repeat Simple_repeat 1 170 0 232 348 80 0 chr20 38313394 38313506 -33840376 - MIR SINE MIR -109 153 33 220 355 0 41 chr20 38313509 38313630 -33840252 + MER5A DNA MER1_type 7 122 -67 326 216 10 72 chr20 38313652 38313749 -33840133 - MIR SINE MIR -66 142 52 247 262 41 57 chr20 38314227 38314349 -33839533 + MIR SINE MIR 29 148 -60 388 276 138 38 chr20 38314612 38314822 -33839060 - MIR SINE MIR -11 251 21 2236 109 0 0 chr20 38314831 38315134 -33838748 - AluSq SINE Alu -10 303 1 1659 153 0 35 chr20 38315134 38315416 -33838466 - AluJb SINE Alu -32 280 9 256 272 100 5 chr20 38315470 38315582 -33838300 - MIR SINE MIR -63 145 26 251 213 53 64 chr20 38315782 38315876 -33838006 + MIR3 SINE MIR 109 201 -7 248 254 27 55 chr20 38316220 38316330 -33837552 + MIR SINE MIR 21 127 -81 478 256 82 36 chr20 38316335 38316530 -33837352 - MIR SINE MIR -37 225 22 216 241 24 48 chr20 38316996 38317079 -33836803 + (CCCCAG)n Simple_repeat Simple_repeat 1 81 0 309 155 0 0 chr20 38317919 38317977 -33835905 + (CGGA)n Simple_repeat Simple_repeat 2 59 0 25 65 0 0 chr20 38318230 38318276 -33835606 + GC_rich Low_complexity Low_complexity 1 46 0 336 286 9 47 chr20 38318607 38318749 -33835133 + MIR SINE MIR 37 171 -64 186 235 132 0 chr20 38318950 38319018 -33834864 + MIR SINE MIR 77 153 -109 864 78 35 0 chr20 38319227 38319342 -33834540 - FLAM_C SINE Alu -12 131 13 264 281 0 11 chr20 38319448 38319540 -33834342 + MIR SINE MIR 60 149 -71 2264 83 3 0 chr20 38319631 38319921 -33833961 + AluSp SINE Alu 1 291 -22 1319 161 4 9 chr20 38319941 38320171 -33833711 + AluJo SINE Alu 82 310 -2 498 253 45 0 chr20 38320602 38320756 -33833126 + L2 LINE L2 2462 2622 -692 1400 112 29 0 chr20 38320810 38321016 -33832866 - AluSc SINE Alu 0 309 98 887 66 0 0 chr20 38321016 38321122 -33832760 + AluSq/x SINE Alu 6 111 -202 367 106 0 15 chr20 38321123 38321189 -33832693 + AluSp/q SINE Alu 239 303 0 895 86 0 0 chr20 38321192 38321309 -33832573 - AluSq/x SINE Alu -195 117 1 516 241 160 26 chr20 38321310 38321606 -33832276 + L2 LINE L2 2689 3024 -289 953 96 52 0 chr20 38321607 38321743 -33832139 + AluSq/x SINE Alu 3 145 -167 2063 87 0 11 chr20 38321743 38321857 -33832025 + AluY SINE Alu 21 135 -176 2092 85 51 20 chr20 38321857 38322152 -33831730 + AluSq SINE Alu 1 304 -9 2063 87 0 11 chr20 38322152 38322313 -33831569 + AluY SINE Alu 135 293 -18 426 356 71 7 chr20 38322313 38322594 -33831288 + L2 LINE L2 3013 3311 -2 242 279 279 0 chr20 38323440 38323562 -33830320 - MER117 DNA MER1_type -41 156 1 203 364 27 0 chr20 38323844 38323954 -33829928 - MIR3 SINE MIR -14 194 82 272 299 0 11 chr20 38324183 38324270 -33829612 + GA-rich Low_complexity Low_complexity 4 89 0 185 204 34 23 chr20 38324312 38324400 -33829482 + GA-rich Low_complexity Low_complexity 1 89 0 427 245 0 72 chr20 38325047 38325186 -33828696 + MER91B DNA MER1_type 1 129 -61 241 200 0 50 chr20 38325206 38325253 -33828629 + MER91B DNA MER1_type 94 139 -51 2324 88 41 0 chr20 38325253 38325547 -33828335 - AluSx SINE Alu -4 308 3 241 200 0 50 chr20 38325547 38325559 -33828323 + MER91B DNA MER1_type 139 150 -40 2487 99 0 0 chr20 38325574 38325887 -33827995 - AluSq SINE Alu 0 313 1 1762 157 60 0 chr20 38325889 38326170 -33827712 - AluJb SINE Alu -14 298 1 334 137 0 0 chr20 38326174 38326225 -33827657 - Alu SINE Alu -12 290 240 525 152 191 0 chr20 38326238 38326343 -33827539 - FLAM_C SINE Alu -17 126 2 2482 95 0 0 chr20 38326405 38326711 -33827171 + AluSx SINE Alu 1 306 -6 2021 151 20 0 chr20 38326728 38327020 -33826862 + AluSx SINE Alu 1 298 -14 1832 179 0 3 chr20 38327058 38327354 -33826528 + AluJo SINE Alu 1 295 -17 2229 101 24 0 chr20 38327483 38327771 -33826111 + AluSp SINE Alu 6 300 -13 2298 82 0 7 chr20 38327887 38328169 -33825713 + AluSx SINE Alu 1 280 -32 180 0 0 0 chr20 38328169 38328189 -33825693 + (CAAT)n Simple_repeat Simple_repeat 4 23 0 2361 99 0 0 chr20 38329026 38329318 -33824564 - AluSq SINE Alu -17 296 5 502 222 96 133 chr20 38329323 38329737 -33824145 + MLT1H LTR MaLR 24 409 0 2242 128 0 0 chr20 38330590 38330886 -33822996 - AluSx SINE Alu -16 296 1 286 409 30 0 chr20 38330937 38331101 -33822781 - MIR SINE MIR 0 262 94 1675 189 20 0 chr20 38331162 38331464 -33822418 - AluJb SINE Alu -4 308 1 1351 74 42 44 chr20 38331518 38331747 -33822135 - L1PA8 LINE L1 -62 6107 5872 2059 153 3 0 chr20 38331817 38332111 -33821771 + AluSx SINE Alu 1 295 -17 263 151 0 57 chr20 38333023 38333076 -33820806 + MIR3 SINE MIR 108 157 -51 330 348 18 0 chr20 38333124 38333236 -33820646 + MER117 DNA MER1_type 81 194 -3 345 303 10 0 chr20 38333238 38333337 -33820545 - MIR3 SINE MIR -51 157 58 264 224 61 41 chr20 38333828 38333926 -33819956 + MIR SINE MIR 46 145 -63 2483 78 0 0 chr20 38334019 38334314 -33819568 - AluSg SINE Alu -15 295 1 321 231 0 0 chr20 38334318 38334383 -33819499 - MER3 DNA MER1_type 0 209 145 1029 144 125 43 chr20 38334383 38334591 -33819291 + AluJo SINE Alu 86 310 -2 2069 135 3 0 chr20 38334600 38334888 -33818994 + AluSx SINE Alu 3 291 -21 615 174 77 71 chr20 38334894 38334961 -33818921 - MER3 DNA MER1_type -6 156 91 2008 136 30 3 chr20 38334961 38335256 -33818626 + AluJb SINE Alu 1 303 -9 615 174 77 71 chr20 38335256 38335343 -33818539 - MER3 DNA MER1_type -71 91 1 750 285 42 0 chr20 38335502 38335716 -33818166 + MIR SINE MIR 25 247 -15 248 308 22 22 chr20 38335823 38335914 -33817968 - MIR SINE MIR -15 247 157 255 237 54 11 chr20 38336026 38336119 -33817763 + MIR SINE MIR 27 123 -85 248 258 0 15 chr20 38336507 38336573 -33817309 - MIR3 SINE MIR -43 165 101 2428 92 3 0 chr20 38337044 38337347 -33816535 + AluSp SINE Alu 1 304 -9 341 264 7 29 chr20 38337703 38337843 -33816039 + (CAGAGA)n Simple_repeat Simple_repeat 2 138 0 1135 284 107 16 chr20 38337878 38338471 -33815411 - L2 LINE L2 -3 3310 2655 384 279 97 19 chr20 38338865 38339019 -33814863 + MIR SINE MIR 32 197 -65 406 302 81 0 chr20 38339175 38339370 -33814512 - MIR SINE MIR 0 262 43 474 262 97 44 chr20 38340232 38340438 -33813444 + MIR SINE MIR 46 262 0 341 260 13 0 chr20 38340541 38340618 -33813264 - MIR3 SINE MIR -8 200 123 1175 79 0 4 chr20 38340620 38340834 -33813048 + AluSx SINE Alu 2 305 -7 803 186 0 0 chr20 38340846 38340975 -33812907 + AluJ SINE Alu 1 129 -183 204 182 167 0 chr20 38340988 38341054 -33812828 - MIR SINE MIR -66 142 66 284 70 23 0 chr20 38341115 38341158 -33812724 + (TA)n Simple_repeat Simple_repeat 2 45 0 2056 139 7 0 chr20 38341158 38341446 -33812436 - AluSx SINE Alu -22 290 1 964 153 25 31 chr20 38341446 38341609 -33812273 + AluJ SINE Alu 118 279 -33 2524 71 3 0 chr20 38342694 38343002 -33810880 - AluSx SINE Alu -2 310 2 242 341 87 0 chr20 38343899 38344025 -33809857 - MIR3 SINE MIR -29 179 43 2163 128 3 0 chr20 38345295 38345591 -33808291 + AluSq SINE Alu 1 297 -16 2161 100 23 23 chr20 38345593 38345892 -33807990 + AluSq SINE Alu 2 300 -13 286 237 114 38 chr20 38345984 38346115 -33807767 - L3 LINE CR1 -216 1361 1221 352 333 35 0 chr20 38346377 38346491 -33807391 - L2 LINE L2 -17 3255 3138 205 170 94 0 chr20 38346686 38346739 -33807143 - MIR SINE MIR -60 148 91 1654 269 103 40 chr20 38347992 38348563 -33805319 - MER115 DNA AcHobo -1 692 158 2435 106 0 0 chr20 38348563 38348865 -33805017 - AluSx SINE Alu -10 302 1 510 213 39 16 chr20 38348872 38348999 -33804883 - FLAM_C SINE Alu 0 133 4 1654 269 103 40 chr20 38348999 38349070 -33804812 - MER115 DNA AcHobo -540 153 1 215 167 0 0 chr20 38349342 38349378 -33804504 + MIR SINE MIR 113 148 -114 255 195 38 16 chr20 38349528 38349620 -33804262 - L2 LINE L2 -355 2917 2828 1089 166 237 76 chr20 38349661 38349831 -33804051 + MLT1D LTR MaLR 1 142 -363 2161 127 6 13 chr20 38349831 38350145 -33803737 + AluSx SINE Alu 1 312 0 1089 166 237 76 chr20 38350145 38350159 -33803723 + MLT1D LTR MaLR 142 152 -353 2141 113 7 3 chr20 38350159 38350469 -33803413 + AluSx SINE Alu 1 311 0 1089 166 237 76 chr20 38350469 38350578 -33803304 + MLT1D LTR MaLR 152 242 -263 819 142 0 0 chr20 38350578 38350705 -33803177 + FLAM_C SINE Alu 1 127 -6 1089 166 237 76 chr20 38350705 38350775 -33803107 + MLT1D LTR MaLR 242 426 -79 190 211 0 26 chr20 38350827 38350865 -33803017 - MIR SINE MIR -138 70 34 783 115 96 25 chr20 38351181 38351338 -33802544 + MER3 DNA MER1_type 42 209 0 2277 118 0 3 chr20 38351564 38351877 -33802005 - AluSx SINE Alu 0 312 1 620 169 42 0 chr20 38351897 38352015 -33801867 - L1MB5 LINE L1 -6 6168 6046 234 91 0 0 chr20 38352015 38352048 -33801834 + (TTCC)n Simple_repeat Simple_repeat 1 33 0 2114 128 7 3 chr20 38352051 38352341 -33801541 - AluSg SINE Alu -19 291 1 1739 147 30 47 chr20 38352343 38352642 -33801240 - AluJo SINE Alu -18 294 1 526 194 0 32 chr20 38352646 38352770 -33801112 - L1MB5 LINE L1 -117 6057 5938 4861 144 12 45 chr20 38352785 38352991 -33800891 - L1MB4 LINE L1 -2 6178 5967 2206 112 3 26 chr20 38352991 38353303 -33800579 - AluSx SINE Alu -6 306 2 4861 144 12 45 chr20 38353303 38353696 -33800186 - L1MB4 LINE L1 -213 5967 5622 2224 97 10 3 chr20 38353696 38353994 -33799888 - AluSg SINE Alu -10 300 1 4861 144 12 45 chr20 38353994 38354395 -33799487 - L1MB4 LINE L1 -558 5622 5209 1742 146 0 0 chr20 38354559 38354812 -33799070 + AluSx SINE Alu 58 310 -2 306 293 61 20 chr20 38354909 38355056 -33798826 + LTR16A1 LTR ERVL 1 153 -304 273 211 184 53 chr20 38355058 38355172 -33798710 + L2 LINE L2 2273 2401 -913 1116 236 72 4 chr20 38355172 38355448 -33798434 + LTR16A LTR ERVL 151 445 -5 269 300 63 18 chr20 38355448 38355560 -33798322 + MIR SINE MIR 38 153 -62 2068 97 8 0 chr20 38355570 38355838 -33798044 - AluSx SINE Alu -22 290 21 2302 102 20 0 chr20 38356054 38356358 -33797524 - AluSx SINE Alu -2 310 1 327 325 17 8 chr20 38356359 38356476 -33797406 + MIR3 SINE MIR 48 165 -43 284 330 10 0 chr20 38357153 38357250 -33796632 + L3 LINE CR1 956 1053 -524 1244 254 102 18 chr20 38357505 38358013 -33795869 + L2 LINE L2 2068 2618 -696 2175 122 7 7 chr20 38358060 38358364 -33795518 - AluSx SINE Alu -8 304 1 1823 153 3 36 chr20 38358384 38358548 -33795334 - AluJb SINE Alu -21 291 140 2412 81 3 3 chr20 38358548 38358846 -33795036 - AluSp SINE Alu -15 298 1 1823 153 3 36 chr20 38358846 38358982 -33794900 - AluJb SINE Alu -172 140 1 447 310 146 0 chr20 38359002 38359228 -33794654 + L2 LINE L2 2827 3085 -228 307 191 176 0 chr20 38359483 38359551 -33794331 - MIR SINE MIR -14 248 169 2172 175 73 64 chr20 38359578 38360109 -33793773 + MLT1F LTR MaLR 3 538 -4 1889 158 13 28 chr20 38360110 38360427 -33793455 + AluJo SINE Alu 1 312 0 2172 143 16 0 chr20 38361176 38361483 -33792399 - AluSx SINE Alu 0 312 1 1965 144 7 0 chr20 38361935 38362236 -33791646 - AluSx SINE Alu 0 308 6 2370 113 0 0 chr20 38363240 38363542 -33790340 + AluSx SINE Alu 1 302 -10 2260 116 13 7 chr20 38363806 38364116 -33789766 + AluSx SINE Alu 1 312 0 2382 80 10 16 chr20 38364190 38364501 -33789381 + AluSp SINE Alu 1 309 -4 722 173 208 0 chr20 38364579 38364752 -33789130 - MER3 DNA MER1_type 0 209 1 2111 149 3 13 chr20 38365476 38365791 -33788091 + AluJb SINE Alu 1 312 0 2324 96 0 20 chr20 38365965 38366268 -33787614 + AluSg SINE Alu 1 297 -13 1157 139 0 0 chr20 38366271 38366436 -33787446 + AluSg/x SINE Alu 134 298 -12 2225 82 10 16 chr20 38366437 38366764 -33787118 + AluY SINE Alu 1 311 0 448 123 0 0 chr20 38366978 38367043 -33786839 + AluS SINE Alu 231 295 -16 680 89 13 146 chr20 38367520 38367561 -33786321 - MER46A DNA MER2_type -2498 233 188 2210 95 13 33 chr20 38367561 38367866 -33786016 + AluSx SINE Alu 9 307 -5 680 89 13 146 chr20 38367866 38367982 -33785900 - MER46A DNA MER2_type -2543 188 97 561 184 0 0 chr20 38367938 38368036 -33785846 + MER46A DNA MER2_type 5 102 -134 * 309 169 0 0 chr20 38368056 38368115 -33785767 + (TCCA)n Simple_repeat Simple_repeat 2 60 0 373 190 0 13 chr20 38368137 38368216 -33785666 + MER46A DNA MER2_type 95 172 -64 2489 58 7 3 chr20 38368223 38368516 -33785366 + AluY SINE Alu 1 294 -17 661 213 0 0 chr20 38368535 38368657 -33785225 - FLAM_A SINE Alu -11 122 1 245 154 46 31 chr20 38368663 38368728 -33785154 + MIR SINE MIR 74 139 -123 2355 99 0 0 chr20 38368734 38369028 -33784854 + AluSc SINE Alu 1 294 -15 331 237 96 37 chr20 38369342 38369409 -33784473 - L2 LINE L2 -3 3310 3248 1952 214 105 15 chr20 38369409 38369950 -33783932 + MLT1E LTR MaLR 4 593 0 331 237 96 37 chr20 38369950 38370017 -33783865 - L2 LINE L2 -65 3248 3168 1950 208 77 35 chr20 38370194 38370714 -33783168 + MLT1F LTR MaLR 1 542 0 459 0 0 0 chr20 38371148 38371199 -33782683 + (TG)n Simple_repeat Simple_repeat 2 52 0 2189 133 0 0 chr20 38371205 38371506 -33782376 - AluSx SINE Alu -11 301 1 2156 118 0 3 chr20 38372146 38372434 -33781448 + AluSx SINE Alu 1 287 -25 180 0 0 0 chr20 38372438 38372458 -33781424 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 241 226 97 90 chr20 38372462 38372514 -33781368 - L1ME4a LINE L1 -2 6119 6069 2335 105 0 3 chr20 38372514 38372818 -33781064 + AluSx SINE Alu 1 303 -9 2330 95 26 0 chr20 38372828 38373132 -33780750 + AluSx SINE Alu 1 312 0 241 226 97 90 chr20 38373132 38373223 -33780659 - L1ME4a LINE L1 -60 6061 5964 1605 194 34 14 chr20 38373427 38373721 -33780161 - AluJb SINE Alu -8 304 5 316 211 117 105 chr20 38374337 38374409 -33779473 - MIR SINE MIR -25 237 167 2155 130 7 7 chr20 38374409 38374717 -33779165 - AluSx SINE Alu -4 308 1 2141 108 7 0 chr20 38374725 38375021 -33778861 - AluSq SINE Alu -15 298 1 316 211 117 105 chr20 38375021 38375033 -33778849 - MIR SINE MIR -101 161 151 2569 42 3 0 chr20 38375033 38375342 -33778540 - AluY SINE Alu -1 310 1 316 211 117 105 chr20 38375342 38375418 -33778464 - MIR SINE MIR -111 151 65 687 210 0 0 chr20 38375419 38375538 -33778344 + FLAM_A SINE Alu 1 119 -14 2334 58 7 3 chr20 38375560 38375853 -33778029 - AluY SINE Alu -17 294 1 389 190 0 13 chr20 38375860 38375939 -33777943 - MER46A DNA MER2_type -64 172 95 309 169 0 0 chr20 38375961 38376020 -33777862 + (TGGA)n Simple_repeat Simple_repeat 2 60 0 582 184 0 0 chr20 38376040 38376138 -33777744 - MER46A DNA MER2_type -134 102 5 * 731 89 13 146 chr20 38376094 38376210 -33777672 + MER46A DNA MER2_type 97 188 -2543 2048 95 13 33 chr20 38376210 38376515 -33777367 - AluSx SINE Alu -5 307 9 731 89 13 146 chr20 38376515 38376556 -33777326 + MER46A DNA MER2_type 188 233 -3 1758 167 0 0 chr20 38377035 38377329 -33776553 - AluJb SINE Alu -18 294 1 1818 142 33 3 chr20 38377618 38377921 -33775961 + AluSx SINE Alu 1 312 0 243 318 87 24 chr20 38378142 38378394 -33775488 - L2 LINE L2 -1152 2162 1895 2315 81 0 10 chr20 38378479 38378789 -33775093 + AluY SINE Alu 1 307 -4 1552 196 20 0 chr20 38378803 38379099 -33774783 + AluJb SINE Alu 6 307 -5 519 330 22 6 chr20 38379387 38379566 -33774316 + MIR3 SINE MIR 20 201 -7 1836 163 3 0 chr20 38379819 38380126 -33773756 + AluJo SINE Alu 1 308 -4 198 103 0 0 chr20 38380126 38380155 -33773727 + (TA)n Simple_repeat Simple_repeat 2 30 0 1986 71 96 0 chr20 38380385 38380666 -33773216 + AluY SINE Alu 1 308 -3 804 143 129 0 chr20 38381022 38381162 -33772720 + AluSg/x SINE Alu 138 295 -17 352 241 35 69 chr20 38381162 38381278 -33772604 - MIR3 SINE MIR -96 112 1 1290 167 5 5 chr20 38381579 38381794 -33772088 - MER20 DNA MER1_type -4 215 1 1732 102 4 0 chr20 38382149 38382384 -33771498 + MER46A DNA MER2_type 1 236 0 1744 112 67 0 chr20 38382668 38382935 -33770947 + AluSx SINE Alu 20 304 -8 622 259 86 0 chr20 38383128 38383290 -33770592 - MER5B DNA MER1_type -2 176 1 424 257 55 0 chr20 38383299 38383408 -33770474 - MIR SINE MIR -57 151 37 810 204 93 28 chr20 38384405 38384621 -33769261 - MIR SINE MIR -1 261 32 1680 139 57 4 chr20 38384739 38385020 -33768862 + AluSg SINE Alu 1 296 -14 1491 114 79 31 chr20 38385201 38385455 -33768427 + AluSq SINE Alu 29 294 -19 2161 117 0 0 chr20 38385482 38385781 -33768101 + AluSx SINE Alu 1 299 -13 2202 87 0 35 chr20 38385794 38386105 -33767777 + AluSx SINE Alu 12 311 -1 2226 95 0 0 chr20 38386105 38386409 -33767473 + AluSg SINE Alu 1 304 -6 817 105 0 0 chr20 38386464 38386578 -33767304 + AluY SINE Alu 1 114 -197 2323 48 41 3 chr20 38386578 38386871 -33767011 + AluY SINE Alu 1 304 -7 2169 61 3 37 chr20 38387605 38387901 -33765981 - AluY SINE Alu -23 288 3 1101 196 0 4 chr20 38388200 38388376 -33765506 - AluJo SINE Alu 0 312 137 243 0 0 0 chr20 38388376 38388403 -33765479 + (TA)n Simple_repeat Simple_repeat 1 27 0 1951 151 0 0 chr20 38388405 38388717 -33765165 - AluSx SINE Alu 0 312 1 1101 196 0 4 chr20 38388717 38388766 -33765116 - AluJo SINE Alu -176 136 85 478 91 15 0 chr20 38388769 38388835 -33765047 - FRAM SINE Alu -64 112 46 1988 97 3 52 chr20 38389933 38390243 -33763639 + AluSg SINE Alu 3 297 -13 1910 82 29 7 chr20 38390380 38390659 -33763223 - AluY SINE Alu -26 285 1 24 0 0 0 chr20 38391425 38391449 -33762433 + GC_rich Low_complexity Low_complexity 1 24 0 209 322 0 0 chr20 38391656 38391715 -33762167 + MIR SINE MIR 203 261 -1 527 256 32 13 chr20 38391872 38392028 -33761854 + MIR SINE MIR 24 182 -80 25 51 0 0 chr20 38392323 38392362 -33761520 + GC_rich Low_complexity Low_complexity 1 39 0 32 0 0 0 chr20 38392456 38392488 -33761394 + GC_rich Low_complexity Low_complexity 1 32 0 234 91 0 0 chr20 38392528 38392561 -33761321 + (CGG)n Simple_repeat Simple_repeat 3 35 0 340 175 0 0 chr20 38392900 38392957 -33760925 + L2 LINE L2 3211 3267 -5 2089 72 0 7 chr20 38393216 38393519 -33760363 - AluSc SINE Alu 0 305 5 1301 97 0 41 chr20 38393565 38393760 -33760122 - AluSx SINE Alu -125 187 1 279 295 76 19 chr20 38394018 38394123 -33759759 + MIR SINE MIR 107 217 -45 229 73 195 0 chr20 38394267 38394308 -33759574 - MIR3 SINE MIR -41 167 119 2142 117 0 16 chr20 38394699 38395016 -33758866 + AluSx SINE Alu 1 312 0 1896 131 7 3 chr20 38395302 38395599 -33758283 + AluSx SINE Alu 1 298 -14 2128 94 28 0 chr20 38395651 38395939 -33757943 - AluSg SINE Alu -14 296 1 2289 84 0 0 chr20 38396329 38396627 -33757255 - AluSc SINE Alu -11 298 1 1685 161 3 3 chr20 38396805 38397097 -33756785 + AluJb SINE Alu 13 304 -8 1058 173 20 20 chr20 38397113 38397315 -33756567 + MLT1A2 LTR MaLR 173 374 0 303 323 0 40 chr20 38397634 38397758 -33756124 - MIR SINE MIR -51 211 93 1271 139 84 0 chr20 38397790 38397992 -33755890 - MER20 DNA MER1_type 0 219 1 412 245 154 27 chr20 38398090 38398278 -33755604 - MIR SINE MIR -44 218 7 238 289 114 53 chr20 38398724 38398899 -33754983 - MIR SINE MIR -42 220 38 2269 95 0 0 chr20 38399228 38399523 -33754359 - AluSx SINE Alu -13 299 5 1262 138 130 35 chr20 38399687 38399941 -33753941 - AluJo SINE Alu -34 278 1 1541 168 16 46 chr20 38399949 38400252 -33753630 - AluJo SINE Alu -18 294 1 189 0 0 0 chr20 38400740 38400761 -33753121 + (CA)n Simple_repeat Simple_repeat 2 22 0 2260 93 3 0 chr20 38400831 38401142 -33752740 + AluSx SINE Alu 1 312 0 1080 114 42 0 chr20 38401142 38401308 -33752574 + AluSp SINE Alu 134 306 -7 2190 62 0 14 chr20 38401498 38401825 -33752057 - AluY SINE Alu 0 323 1 2234 78 0 0 chr20 38401832 38402146 -33751736 - AluSq SINE Alu 0 313 1 1248 154 0 0 chr20 38403442 38403630 -33750252 - MER5A DNA MER1_type 0 189 2 318 234 31 0 chr20 38403946 38404010 -33749872 - L2 LINE L2 -6 3266 3201 299 246 0 0 chr20 38404104 38404169 -33749713 + L2 LINE L2 3208 3272 0 2176 96 10 0 chr20 38404718 38405009 -33748873 + AluSg SINE Alu 3 296 -14 666 232 7 7 chr20 38405232 38405374 -33748508 + AluJb SINE Alu 118 259 -53 1461 161 9 62 chr20 38405375 38405697 -33748185 - AluJo SINE Alu -7 305 1 1446 186 11 4 chr20 38405753 38406027 -33747855 - AluJb SINE Alu -3 309 34 1654 131 36 43 chr20 38406135 38406440 -33747442 - AluSx SINE Alu -9 303 1 2097 97 20 3 chr20 38406447 38406747 -33747135 - AluSx SINE Alu -6 306 2 417 280 179 16 chr20 38406946 38407025 -33746857 + MARNA DNA Mariner 77 142 -444 1889 139 6 22 chr20 38407025 38407342 -33746540 - AluJb SINE Alu 0 312 1 417 280 179 16 chr20 38407342 38407662 -33746220 + MARNA DNA Mariner 142 567 -19 1506 157 41 27 chr20 38408050 38408344 -33745538 + AluJo SINE Alu 1 298 -14 1943 124 7 29 chr20 38408345 38408652 -33745230 + AluSx SINE Alu 11 310 -2 2359 76 3 9 chr20 38408713 38409028 -33744854 + AluSp SINE Alu 1 313 0 1416 173 6 70 chr20 38409035 38409365 -33744517 + AluJo SINE Alu 1 309 -3 390 238 12 0 chr20 38409877 38409961 -33743921 + L2 LINE L2 2885 2969 -345 395 299 9 0 chr20 38409961 38410068 -33743814 + LTR33 LTR ERVL 1 108 -413 410 274 66 30 chr20 38410146 38410343 -33743539 + LTR33 LTR ERVL 318 521 0 495 254 168 15 chr20 38410343 38410540 -33743342 + L2 LINE L2 2964 3190 -123 2231 82 0 25 chr20 38410954 38411269 -33742613 - AluSg SINE Alu -3 307 1 867 221 72 21 chr20 38411540 38411775 -33742107 - MIR SINE MIR 0 262 16 1941 124 43 0 chr20 38412063 38412362 -33741520 + AluSx SINE Alu 1 312 0 1226 133 39 0 chr20 38412367 38412570 -33741312 + AluSg/x SINE Alu 82 292 -20 227 256 94 124 chr20 38412752 38412986 -33740896 + L2 LINE L2 2867 3093 -179 210 200 25 5 chr20 38413023 38413073 -33740809 + L2 LINE L2 3197 3288 -25 2142 200 81 46 chr20 38413097 38413238 -33740644 + MLT1F LTR MaLR 5 140 -402 2336 74 3 0 chr20 38413238 38413536 -33740346 - AluSp SINE Alu -14 299 1 2142 200 81 46 chr20 38413536 38413914 -33739968 + MLT1F LTR MaLR 140 542 0 181 237 26 0 chr20 38413995 38414033 -33739849 - L3 LINE CR1 -592 985 947 719 208 57 6 chr20 38415127 38415286 -33738596 - MER5A DNA MER1_type -22 167 1 570 186 26 9 chr20 38416875 38416988 -33736894 + MIR SINE MIR 34 148 -60 1361 151 98 15 chr20 38416988 38417253 -33736629 + L1MB4 LINE L1 5884 6170 -10 367 276 44 0 chr20 38417466 38417579 -33736303 - MIR SINE MIR -62 146 71 2189 114 0 0 chr20 38418049 38418348 -33735534 + AluSx SINE Alu 1 299 -13 749 135 0 32 chr20 38418355 38418481 -33735401 + FLAM_C SINE Alu 1 122 -11 249 0 48 24 chr20 38418488 38418530 -33735352 + (TAAA)n Simple_repeat Simple_repeat 3 45 0 2068 106 3 0 chr20 38419730 38420023 -33733859 - AluSp SINE Alu -19 294 1 2100 119 0 0 chr20 38420024 38420317 -33733565 - AluSg SINE Alu -17 293 1 812 156 31 0 chr20 38420321 38420449 -33733433 - AluJo SINE Alu -178 134 3 2334 75 0 0 chr20 38420525 38420819 -33733063 - AluY SINE Alu -17 294 1 2344 65 0 16 chr20 38420981 38421290 -33732592 - AluY SINE Alu -7 304 1 1540 187 3 10 chr20 38421633 38421933 -33731949 - AluJb SINE Alu -14 298 1 2148 109 6 3 chr20 38422001 38422312 -33731570 + AluSx SINE Alu 1 312 0 427 151 274 47 chr20 38422377 38422483 -33731399 + FLAM_A SINE Alu 1 130 -3 2412 81 0 0 chr20 38422486 38422794 -33731088 + AluSc SINE Alu 1 308 -1 1706 161 3 26 chr20 38422810 38423114 -33730768 + AluJo SINE Alu 1 297 -15 2073 114 3 0 chr20 38423527 38423816 -33730066 + AluSx SINE Alu 11 300 -12 485 277 87 65 chr20 38423817 38424123 -33729759 + L1MC/D LINE L1 5360 5658 -2150 243 0 0 0 chr20 38424123 38424150 -33729732 + (A)n Simple_repeat Simple_repeat 1 27 0 2178 83 4 0 chr20 38424150 38424416 -33729466 + AluSp SINE Alu 1 267 -46 2234 62 44 0 chr20 38424415 38424689 -33729193 + AluYa5 SINE Alu 11 296 -15 485 277 87 65 chr20 38424416 38424731 -33729151 + L1MC/D LINE L1 5657 5737 -2071 2333 112 0 6 chr20 38424786 38425099 -33728783 + AluSx SINE Alu 1 311 -1 1995 112 54 0 chr20 38425262 38425539 -33728343 + AluSx SINE Alu 1 292 -20 2433 90 0 10 chr20 38425900 38426211 -33727671 + AluSc SINE Alu 1 308 -1 937 129 8 0 chr20 38426364 38426496 -33727386 + AluSq/x SINE Alu 1 133 -180 2178 111 0 3 chr20 38426502 38426791 -33727091 + AluSc SINE Alu 1 288 -21 1071 175 21 5 chr20 38427145 38427339 -33726543 + AluSx SINE Alu 1 197 -115 42 36 0 0 chr20 38427450 38427506 -33726376 + AT_rich Low_complexity Low_complexity 1 56 0 2102 116 24 10 chr20 38427584 38427878 -33726004 - AluSx SINE Alu -10 302 5 243 311 0 44 chr20 38427881 38427971 -33725911 - MER5A DNA MER1_type -68 121 36 186 179 26 0 chr20 38428182 38428221 -33725661 + MIR SINE MIR 113 152 -110 2115 116 3 3 chr20 38428293 38428585 -33725297 - AluSx SINE Alu -20 292 1 22 0 0 0 chr20 38431112 38431134 -33722748 + AT_rich Low_complexity Low_complexity 1 22 0 810 124 0 0 chr20 38432739 38432852 -33721030 - FLAM_C SINE Alu -5 138 26 337 252 17 92 chr20 38432914 38432975 -33720907 - L1ME LINE L1 -302 5819 5770 2056 148 17 0 chr20 38432975 38433273 -33720609 - AluSx SINE Alu -9 303 1 337 252 17 92 chr20 38433273 38433330 -33720552 - L1ME LINE L1 -351 5770 5710 2435 90 0 3 chr20 38433357 38433658 -33720224 + AluSc SINE Alu 2 301 -8 2217 126 0 0 chr20 38433670 38433972 -33719910 + AluSx SINE Alu 1 302 -10 667 176 0 24 chr20 38433994 38434119 -33719763 + FRAM SINE Alu 40 161 -15 2316 55 47 0 chr20 38434123 38434420 -33719462 + AluY SINE Alu 3 311 0 516 167 21 10 chr20 38434429 38434525 -33719357 + MIR SINE MIR 34 130 -132 2033 83 4 0 chr20 38434545 38434798 -33719084 - AluSp SINE Alu 0 313 60 280 269 19 28 chr20 38434808 38434916 -33718966 - L1ME LINE L1 -413 5708 5602 473 202 26 0 chr20 38435013 38435127 -33718755 + MLT2B1 LTR ERVL 2 118 -402 2175 113 3 14 chr20 38435131 38435424 -33718458 + AluSx SINE Alu 1 290 -22 1335 114 0 6 chr20 38435618 38435793 -33718089 - AluSx SINE Alu -138 174 1 468 297 114 9 chr20 38435798 38436017 -33717865 - MIR SINE MIR -19 243 2 409 270 113 27 chr20 38436045 38436230 -33717652 - MIR SINE MIR -2 260 60 396 228 22 0 chr20 38436786 38436878 -33717004 - MIR SINE MIR -94 168 75 405 0 0 0 chr20 38437019 38437064 -33716818 + (CA)n Simple_repeat Simple_repeat 2 46 0 405 284 8 16 chr20 38437064 38437191 -33716691 + GA-rich Low_complexity Low_complexity 3 128 0 1677 160 24 21 chr20 38437196 38437484 -33716398 - AluJo SINE Alu -23 289 1 773 175 0 0 chr20 38437698 38437824 -33716058 + FLAM_A SINE Alu 1 126 -7 2197 122 3 0 chr20 38439004 38439300 -33714582 - AluSx SINE Alu -15 297 1 2367 101 0 3 chr20 38439405 38439711 -33714171 - AluSx SINE Alu -7 305 1 217 293 178 19 chr20 38439851 38440008 -33713874 + L2 LINE L2 2977 3158 -114 546 284 36 50 chr20 38440280 38440502 -33713380 - MIR SINE MIR -3 259 41 1419 157 45 21 chr20 38441178 38441282 -33712600 - AluSx SINE Alu -64 248 148 2751 48 0 0 chr20 38441282 38441592 -33712290 - AluY SINE Alu -1 310 1 1419 157 45 21 chr20 38441592 38441729 -33712153 - AluSx SINE Alu -164 148 1 2218 129 0 7 chr20 38441730 38442039 -33711843 - AluSx SINE Alu -5 307 1 766 162 7 29 chr20 38442041 38442177 -33711705 - AluJo/FLAM SINE Alu -169 133 1 804 252 22 30 chr20 38442226 38442333 -33711549 + L1ME LINE L1 5499 5605 -516 2315 109 0 0 chr20 38442333 38442635 -33711247 - AluSg SINE Alu -8 302 1 804 252 22 30 chr20 38442635 38442797 -33711085 + L1ME LINE L1 5605 5766 -355 774 254 19 38 chr20 38443379 38443526 -33710356 + MER63A DNA MER1_type 2 145 -1543 2244 104 16 3 chr20 38443526 38443835 -33710047 + AluSq SINE Alu 1 313 0 774 254 19 38 chr20 38443835 38443900 -33709982 + MER63A DNA MER1_type 145 210 0 405 141 0 0 chr20 38444124 38444195 -33709687 + (TAGA)n Simple_repeat Simple_repeat 4 74 0 1896 130 0 0 chr20 38444196 38444449 -33709433 - AluSx SINE Alu -15 297 45 235 269 0 26 chr20 38445933 38446011 -33707871 + L2 LINE L2 3126 3201 -71 1920 141 3 50 chr20 38446053 38446221 -33707661 - AluJo SINE Alu -7 305 158 2441 105 0 0 chr20 38446221 38446527 -33707355 - AluSx SINE Alu -6 306 1 1920 141 3 50 chr20 38446527 38446678 -33707204 - AluJo SINE Alu -154 158 1 2000 134 0 3 chr20 38446810 38447094 -33706788 + AluSx SINE Alu 30 312 0 1251 221 84 7 chr20 38447134 38447432 -33706450 + LTR16C LTR ERVL 170 490 -1 312 260 165 0 chr20 38447516 38447643 -33706239 - MIR SINE MIR -89 173 26 202 261 14 87 chr20 38448015 38448153 -33705729 + (CGGGG)n Simple_repeat Simple_repeat 1 128 0 2078 119 10 3 chr20 38449361 38449656 -33704226 - AluSx SINE Alu -15 297 1 289 296 0 56 chr20 38449656 38449764 -33704118 - MIR SINE MIR -63 199 98 572 210 26 87 chr20 38449871 38450066 -33703816 + LTR16A1 LTR ERVL 176 358 -99 488 214 34 0 chr20 38450088 38450177 -33703705 - MER81 DNA DNA -1 113 22 304 235 86 12 chr20 38450192 38450273 -33703609 - MER81 DNA DNA -27 87 1 273 241 0 0 chr20 38450273 38450328 -33703554 + LTR16A1 LTR ERVL 403 457 0 1844 164 19 22 chr20 38450362 38450498 -33703384 + AluJb SINE Alu 1 136 -176 2345 84 0 3 chr20 38450498 38450810 -33703072 + AluSp SINE Alu 2 312 0 1844 164 19 22 chr20 38450810 38450983 -33702899 + AluJb SINE Alu 136 310 -2 218 103 0 26 chr20 38450987 38451026 -33702856 + (GGGA)n Simple_repeat Simple_repeat 3 40 0 248 292 161 35 chr20 38451107 38451301 -33702581 - MIR3 SINE MIR -50 212 5 365 218 112 81 chr20 38451765 38451938 -33701944 + MIR SINE MIR 16 188 -57 833 311 44 61 chr20 38451950 38452317 -33701565 + L1MC4a LINE L1 5351 5708 -2100 995 183 0 0 chr20 38452317 38452481 -33701401 - FRAM SINE Alu -2 164 1 833 311 44 61 chr20 38452481 38452634 -33701248 + L1MC4a LINE L1 5708 5862 -1946 595 174 0 0 chr20 38452731 38452840 -33701042 + FLAM_A SINE Alu 26 134 -8 2496 72 13 0 chr20 38452960 38453266 -33700616 + AluSx SINE Alu 1 310 -2 2126 128 26 0 chr20 38453280 38453584 -33700298 + AluSx SINE Alu 1 312 0 381 234 141 31 chr20 38453696 38453824 -33700058 + MLT1K LTR MaLR 33 174 -414 * 487 279 62 50 chr20 38453822 38454001 -33699881 + MLT1K LTR MaLR 296 476 -112 2214 130 0 3 chr20 38454950 38455257 -33698625 + AluSx SINE Alu 1 306 -6 373 279 18 9 chr20 38455317 38455428 -33698454 + MIR SINE MIR 66 177 -85 255 167 8 0 chr20 38455830 38455891 -33697991 + MIR SINE MIR 61 124 -84 192 274 69 59 chr20 38456281 38456383 -33697499 + MIR SINE MIR 87 189 -73 195 405 6 18 chr20 38456806 38456974 -33696908 + L2 LINE L2 2933 3098 -174 513 132 0 0 chr20 38457635 38457711 -33696171 - AluJ/FLAM SINE Alu -235 77 2 2014 181 0 0 chr20 38457787 38458096 -33695786 - AluSx SINE Alu -3 309 1 862 112 0 17 chr20 38459026 38459142 -33694740 + AluSq/x SINE Alu 1 114 -199 1721 74 5 0 chr20 38459142 38459358 -33694524 - AluY SINE Alu -4 307 91 859 195 24 30 chr20 38459458 38459494 -33694388 - AluJb SINE Alu -144 168 133 2244 113 0 10 chr20 38459494 38459794 -33694088 - AluSx SINE Alu -15 297 1 859 195 24 30 chr20 38459794 38459926 -33693956 - AluJb SINE Alu -179 133 1 289 331 60 0 chr20 38460074 38460207 -33693675 - L2 LINE L2 -1 3312 3172 442 279 93 0 chr20 38460402 38460585 -33693297 - L2 LINE L2 -550 2764 2565 2084 115 31 10 chr20 38460663 38460951 -33692931 + AluSx SINE Alu 1 294 -18 283 276 181 0 chr20 38460953 38461069 -33692813 + MIR SINE MIR 60 196 -66 190 362 100 22 chr20 38461090 38461361 -33692521 - L2 LINE L2 -920 2394 2103 736 143 0 8 chr20 38461364 38461483 -33692399 + FLAM_C SINE Alu 1 118 -25 2119 125 3 0 chr20 38461577 38461880 -33692002 - AluY SINE Alu -5 306 3 21 0 0 0 chr20 38462113 38462134 -33691748 + GC_rich Low_complexity Low_complexity 1 21 0 310 89 18 18 chr20 38462268 38462324 -33691558 + (TCTCCC)n Simple_repeat Simple_repeat 3 58 0 1812 169 0 0 chr20 38462328 38462606 -33691276 - AluJo SINE Alu -34 278 1 1495 147 8 0 chr20 38462606 38462858 -33691024 - L1MB2 LINE L1 -346 5825 5572 2201 90 0 28 chr20 38462951 38463279 -33690603 - AluSq SINE Alu 0 322 3 1601 149 116 8 chr20 38463286 38463554 -33690328 - AluSg1 SINE Alu -6 303 7 284 240 66 66 chr20 38463579 38463700 -33690182 - MIR SINE MIR -113 149 29 270 286 48 0 chr20 38463634 38463718 -33690164 + MIR SINE MIR 51 138 -70 * 306 290 112 0 chr20 38464548 38464655 -33689227 - MIR SINE MIR -53 209 91 576 272 22 0 chr20 38464711 38464847 -33689035 + L2 LINE L2 3134 3272 0 221 271 123 57 chr20 38465231 38465353 -33688529 - MIR SINE MIR -88 174 45 1414 129 0 5 chr20 38465442 38465644 -33688238 - AluJo SINE Alu -8 304 104 432 123 0 0 chr20 38465644 38465709 -33688173 + AluS SINE Alu 1 65 -248 221 318 41 90 chr20 38465838 38465972 -33687910 + L2 LINE L2 2617 2735 -579 2435 97 0 0 chr20 38465972 38466283 -33687599 + AluSx SINE Alu 1 311 -1 221 318 41 90 chr20 38466283 38466393 -33687489 + L2 LINE L2 2735 2849 -465 2180 135 0 7 chr20 38466616 38466919 -33686963 + AluSq SINE Alu 1 301 -12 369 289 194 42 chr20 38467177 38467461 -33686421 + L2 LINE L2 2964 3290 -23 1145 180 38 0 chr20 38467463 38467674 -33686208 + AluJo SINE Alu 2 220 -92 282 120 20 0 chr20 38467674 38467724 -33686158 + AluSg/x SINE Alu 84 134 -166 1973 144 0 38 chr20 38467728 38468048 -33685834 + AluSx SINE Alu 4 311 -1 2191 115 23 0 chr20 38468255 38468559 -33685323 - AluSx SINE Alu -1 311 1 230 329 0 0 chr20 38468916 38468989 -33684893 + MIR SINE MIR 134 206 -56 239 316 44 0 chr20 38469030 38469144 -33684738 + L1ME3 LINE L1 5641 5759 -362 294 256 12 0 chr20 38469152 38469234 -33684648 + L1ME3 LINE L1 6065 6147 -15 375 78 0 0 chr20 38469387 38469438 -33684444 + (TC)n Simple_repeat Simple_repeat 1 51 0 1679 148 0 8 chr20 38469460 38469703 -33684179 - AluSq SINE Alu -72 241 1 1911 173 0 3 chr20 38470028 38470335 -33683547 + AluJb SINE Alu 1 306 -6 490 219 65 0 chr20 38470714 38470837 -33683045 - MIR3 SINE MIR -45 163 33 557 263 120 23 chr20 38470900 38471075 -33682807 - MIR SINE MIR -44 218 27 216 296 71 0 chr20 38471644 38471742 -33682140 + L2 LINE L2 3168 3272 0 453 186 10 0 chr20 38471927 38472024 -33681858 + AluSp/q SINE Alu 216 313 0 2181 104 0 58 chr20 38472147 38472474 -33681408 + AluSx SINE Alu 5 312 0 278 358 58 69 chr20 38472555 38472932 -33680950 + L2 LINE L2 2850 3222 -50 1732 188 0 22 chr20 38473159 38473297 -33680585 + AluJo SINE Alu 1 141 -171 2365 108 0 0 chr20 38473297 38473604 -33680278 + AluSx SINE Alu 1 307 -5 1732 188 0 22 chr20 38473604 38473784 -33680098 + AluJo SINE Alu 141 312 0 243 230 108 0 chr20 38475076 38475150 -33678732 - L2 LINE L2 -51 3221 3140 264 283 54 0 chr20 38475250 38475342 -33678540 + MIR SINE MIR 121 217 -45 320 262 101 18 chr20 38475388 38475537 -33678345 - MIR SINE MIR -58 204 32 2430 109 0 0 chr20 38475677 38475989 -33677893 + AluSx SINE Alu 1 312 0 24 0 0 0 chr20 38476172 38476196 -33677686 + AT_rich Low_complexity Low_complexity 1 24 0 263 264 56 14 chr20 38476484 38476556 -33677326 - L2 LINE L2 -6 3307 3233 431 266 129 26 chr20 38476571 38476904 -33676978 + LTR16A LTR ERVL 16 420 -30 837 182 0 0 chr20 38476983 38477115 -33676767 + FLAM_C SINE Alu 1 132 -1 791 203 0 0 chr20 38477210 38477338 -33676544 + AluJ SINE Alu 1 128 -174 1121 249 23 45 chr20 38477349 38477826 -33676056 + L1MC/D LINE L1 5111 5577 -754 245 301 129 0 chr20 38478089 38478182 -33675700 - MIR3 SINE MIR -48 160 56 326 233 248 16 chr20 38478267 38478396 -33675486 - MER5B DNA MER1_type 0 178 20 195 372 69 14 chr20 38478787 38478932 -33674950 + MIR3 SINE MIR 12 164 -44 357 174 0 51 chr20 38479153 38479251 -33674631 + L1MB5 LINE L1 5736 5828 -346 2226 116 3 0 chr20 38479251 38479545 -33674337 + AluSq SINE Alu 1 295 -18 2352 103 0 19 chr20 38479931 38480250 -33673632 + AluSp SINE Alu 1 313 0 1093 152 0 6 chr20 38480260 38480425 -33673457 + AluJ SINE Alu 134 297 -15 2283 116 0 3 chr20 38481449 38481750 -33672132 - AluSx SINE Alu -12 300 1 401 242 62 62 chr20 38482125 38482216 -33671666 - MIR SINE MIR -43 219 126 1929 151 3 22 chr20 38482216 38482528 -33671354 + AluJo SINE Alu 1 306 -6 401 242 62 62 chr20 38482528 38482597 -33671285 - MIR SINE MIR -135 127 59 2013 183 96 17 chr20 38482859 38483328 -33670554 + L1MB7 LINE L1 5621 6126 -58 1737 162 0 11 chr20 38483331 38483615 -33670267 - AluJo SINE Alu 0 312 32 2264 104 3 10 chr20 38483636 38483935 -33669947 - AluSq SINE Alu -16 297 1 231 106 21 21 chr20 38483937 38483984 -33669898 + L1MB8 LINE L1 6112 6158 -20 201 319 44 26 chr20 38484013 38484126 -33669756 + MIR SINE MIR 130 244 -18 248 238 24 48 chr20 38484593 38484677 -33669205 - MIR SINE MIR -6 256 175 2230 79 0 11 chr20 38484692 38484971 -33668911 - AluY SINE Alu -5 306 31 1708 165 7 7 chr20 38485329 38485632 -33668250 + AluSq SINE Alu 3 305 -8 662 193 0 0 chr20 38485632 38485741 -33668141 - FLAM_A SINE Alu -31 111 3 262 195 0 0 chr20 38485853 38485894 -33667988 + Alu SINE Alu 3 43 -260 1781 166 3 7 chr20 38485895 38486178 -33667704 + AluJo SINE Alu 1 282 -30 237 65 0 0 chr20 38486181 38486212 -33667670 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 534 308 22 16 chr20 38486265 38486450 -33667432 + MIR SINE MIR 56 241 -21 346 172 77 82 chr20 38486849 38486973 -33666909 - MIR SINE MIR -47 161 37 309 324 39 0 chr20 38487376 38487478 -33666404 + MIR SINE MIR 21 126 -136 251 83 0 42 chr20 38487523 38487571 -33666311 + (CTCA)n Simple_repeat Simple_repeat 1 46 0 313 314 12 12 chr20 38487634 38487720 -33666162 + L2 LINE L2 3187 3272 0 2284 113 0 29 chr20 38488162 38488472 -33665410 + AluSx SINE Alu 1 301 -11 386 280 129 30 chr20 38488638 38488770 -33665112 - MIR SINE MIR -99 163 19 289 200 137 32 chr20 38488837 38488932 -33664950 - MIR SINE MIR 0 262 158 1659 172 3 14 chr20 38489177 38489488 -33664394 + AluJo SINE Alu 1 308 0 2307 108 7 7 chr20 38489491 38489797 -33664085 + AluSx SINE Alu 1 306 -6 356 213 82 41 chr20 38489844 38489966 -33663916 - MIR SINE MIR -77 185 59 241 243 0 29 chr20 38490110 38490180 -33663702 + MER5A DNA MER1_type 118 185 -4 234 129 16 48 chr20 38490200 38490262 -33663620 + (CTA)n Simple_repeat Simple_repeat 2 61 0 2177 125 24 0 chr20 38490330 38490627 -33663255 + AluSx SINE Alu 1 304 -8 602 152 58 14 chr20 38490673 38490811 -33663071 - MIR SINE MIR -55 207 64 761 152 85 67 chr20 38491094 38491258 -33662624 + MER5A DNA MER1_type 13 179 -10 323 304 22 51 chr20 38491374 38491512 -33662370 - MIR SINE MIR -119 143 10 324 305 90 28 chr20 38491762 38491939 -33661943 + MIR SINE MIR 5 192 -70 460 275 76 62 chr20 38492521 38492768 -33661114 - MIR SINE MIR 0 262 12 330 313 46 15 chr20 38493065 38493196 -33660686 + MER5A DNA MER1_type 55 189 0 292 297 43 115 chr20 38493196 38493564 -33660318 + L2 LINE L2 2931 3271 -1 607 140 63 144 chr20 38494216 38494286 -33659596 + LOR1-int LTR ERV1 3392 3466 -4654 2241 128 3 0 chr20 38494286 38494590 -33659292 - AluSx SINE Alu -7 305 1 607 140 63 144 chr20 38494590 38494741 -33659141 + LOR1-int LTR ERV1 3466 3595 -4525 1113 188 5 5 chr20 38494744 38494951 -33658931 - AluSg/x SINE Alu -21 291 85 950 111 7 14 chr20 38494965 38495109 -33658773 - MER50 LTR ERV1 -482 252 110 2177 116 0 3 chr20 38495111 38495404 -33658478 - AluSc SINE Alu -17 292 1 6873 140 33 56 chr20 38495404 38495519 -33658363 - MER50-int LTR ERV1 -5940 1265 1149 247 195 0 0 chr20 38495519 38495560 -33658322 + AluSx SINE Alu 1 41 -259 5264 164 19 24 chr20 38495561 38496534 -33657348 + LTR5 LTR ERVK 1 969 0 2109 109 0 0 chr20 38496534 38496808 -33657074 + AluSx SINE Alu 35 310 -2 6873 140 33 56 chr20 38496808 38497895 -33655987 - MER50-int LTR ERV1 -6055 1150 47 2678 97 17 6 chr20 38497895 38498255 -33655627 - THE1B LTR MaLR 0 364 1 6873 140 33 56 chr20 38498255 38498298 -33655584 - MER50-int LTR ERV1 -7158 47 5 1974 196 39 32 chr20 38498303 38498768 -33655114 - MER50 LTR ERV1 -23 711 244 1077 239 10 0 chr20 38498783 38498992 -33654890 - AluSx SINE Alu -100 212 2 3664 151 3 7 chr20 38498992 38499582 -33654300 + LOR1-int LTR ERV1 3585 4172 -3948 576 134 0 0 chr20 38499601 38499683 -33654199 + AluJb SINE Alu 24 105 -207 487 148 158 0 chr20 38499683 38499784 -33654098 + MER50 LTR ERV1 1 117 -617 369 43 0 0 chr20 38499785 38499832 -33654050 + AluY SINE Alu 1 47 -255 322 138 149 23 chr20 38500008 38500095 -33653787 - MER103 DNA DNA -7 159 62 2162 113 3 0 chr20 38500179 38500471 -33653411 - AluSx SINE Alu -17 295 3 1361 141 0 10 chr20 38500610 38500809 -33653073 - AluJo SINE Alu -115 197 1 1047 205 0 70 chr20 38500975 38501204 -33652678 + AluJb SINE Alu 100 312 0 901 121 0 0 chr20 38501225 38501341 -33652541 + AluJo/FLAM SINE Alu 1 116 -186 354 104 0 0 chr20 38501341 38501389 -33652493 - Alu SINE Alu -252 48 1 1986 178 12 3 chr20 38501566 38501909 -33651973 - MER7A DNA MER2_type -1 345 2 324 0 0 0 chr20 38501910 38501946 -33651936 + (TG)n Simple_repeat Simple_repeat 1 36 0 189 0 0 0 chr20 38502070 38502091 -33651791 + (TG)n Simple_repeat Simple_repeat 2 22 0 225 154 0 0 chr20 38502333 38502372 -33651510 + (TG)n Simple_repeat Simple_repeat 1 39 0 226 225 0 0 chr20 38502550 38502590 -33651292 + (TCCA)n Simple_repeat Simple_repeat 1 40 0 428 243 9 9 chr20 38503199 38503310 -33650572 - L1ME3 LINE L1 -6 6156 6046 1632 213 14 7 chr20 38503717 38504004 -33649878 + AluJo SINE Alu 12 300 -12 998 137 41 41 chr20 38504201 38504398 -33649484 + L1MB5 LINE L1 5972 6168 -6 2107 129 30 54 chr20 38504448 38504635 -33649247 - THE1B LTR MaLR 0 364 188 2269 93 4 0 chr20 38504635 38504950 -33648932 - AluSc SINE Alu 0 317 2 2107 129 30 54 chr20 38504950 38505134 -33648748 - THE1B LTR MaLR -176 188 1 7363 113 20 3 chr20 38505134 38506210 -33647672 - THE1B-int LTR MaLR 0 1580 486 448 314 103 0 chr20 38506528 38506713 -33647169 - MIR SINE MIR -9 253 50 272 280 120 10 chr20 38506706 38506806 -33647076 + L2 LINE L2 3158 3268 -4 * 1835 167 40 30 chr20 38507429 38507800 -33646082 - THE1C LTR MaLR 0 375 1 253 271 277 0 chr20 38508027 38508182 -33645700 - MIR SINE MIR -4 258 61 1124 190 0 20 chr20 38508951 38509151 -33644731 - AluJo SINE Alu -116 196 1 2277 107 17 0 chr20 38509249 38509539 -33644343 - AluSx SINE Alu -17 295 1 280 274 20 59 chr20 38509666 38509747 -33644135 + MLT1L LTR MaLR 443 517 -98 2319 112 34 57 chr20 38509747 38509954 -33643928 + MER51B LTR ERV1 1 196 -181 2414 77 0 7 chr20 38509954 38510252 -33643630 - AluSx SINE Alu -16 296 1 2319 112 34 57 chr20 38510252 38510429 -33643453 + MER51B LTR ERV1 196 376 -1 280 274 20 59 chr20 38510429 38510500 -33643382 + MLT1L LTR MaLR 517 589 -26 1102 203 61 75 chr20 38510778 38511123 -33642759 + MLT1B LTR MaLR 3 342 -48 489 242 34 96 chr20 38511123 38511219 -33642663 - LTR35 LTR ERV1 0 618 536 2297 131 0 3 chr20 38511219 38511533 -33642349 - AluSp SINE Alu 0 313 1 489 242 34 96 chr20 38511533 38511614 -33642268 - LTR35 LTR ERV1 -82 536 452 2186 129 0 3 chr20 38511617 38511919 -33641963 - AluSx SINE Alu -11 301 1 3382 100 35 37 chr20 38512003 38512515 -33641367 + MER9 LTR ERVK 1 511 0 437 110 10 70 chr20 38512527 38512627 -33641255 - LTR43 LTR ERV1 -324 278 185 232 239 0 138 chr20 38512749 38512879 -33641003 - LTR35 LTR ERV1 -506 112 1 268 204 0 0 chr20 38512879 38512923 -33640959 + MLT1B LTR MaLR 339 382 -8 1743 166 3 55 chr20 38513094 38513419 -33640463 + AluSx SINE Alu 1 308 -4 2205 120 0 0 chr20 38513927 38514218 -33639664 + AluSg SINE Alu 1 291 -19 1962 145 17 3 chr20 38514808 38515105 -33638777 + AluJo SINE Alu 1 301 -11 406 230 200 15 chr20 38515108 38515243 -33638639 + MIR SINE MIR 28 187 -75 1640 136 16 0 chr20 38515306 38515548 -33638334 + AluSx SINE Alu 3 248 -64 1570 150 23 112 chr20 38515765 38516112 -33637770 - AluYb8 SINE Alu 0 318 3 335 230 14 2 chr20 38516163 38516246 -33637636 + MIR SINE MIR 73 154 -63 257 322 82 27 chr20 38516309 38516455 -33637427 + MLT1K LTR MaLR 142 295 -293 930 205 27 137 chr20 38516496 38516777 -33637105 + L2 LINE L2 2812 3122 -191 2196 107 3 7 chr20 38516777 38517087 -33636795 - AluY SINE Alu -2 309 1 2192 138 0 0 chr20 38517097 38517402 -33636480 - AluJb SINE Alu -3 309 5 930 205 27 137 chr20 38517402 38517553 -33636329 + L2 LINE L2 3131 3206 -107 1148 206 20 122 chr20 38517654 38517861 -33636021 - AluYb8 SINE Alu 0 318 160 1962 169 0 3 chr20 38517861 38518168 -33635714 - AluJb SINE Alu -6 306 1 1148 206 20 122 chr20 38518168 38518314 -33635568 - AluYb8 SINE Alu -158 160 1 1555 203 0 40 chr20 38518322 38518643 -33635239 - AluJb SINE Alu -2 310 3 2115 93 29 7 chr20 38518668 38518969 -33634913 - AluSx SINE Alu 0 307 1 307 228 37 77 chr20 38519494 38519603 -33634279 + MIR SINE MIR 8 110 -103 2129 88 0 70 chr20 38519712 38520043 -33633839 + AluSx SINE Alu 5 312 0 2131 68 65 38 chr20 38520366 38520516 -33633366 - AluSq SINE Alu -11 302 158 2307 90 7 7 chr20 38520516 38520815 -33633067 - AluSg SINE Alu -11 299 1 2131 68 65 38 chr20 38520815 38520957 -33632925 - AluSq SINE Alu -155 158 2 1968 157 20 0 chr20 38521064 38521369 -33632513 - AluSx SINE Alu -1 311 1 225 289 26 66 chr20 38521395 38521471 -33632411 + MIR SINE MIR 7 79 -183 24 39 0 0 chr20 38523983 38524009 -33629873 + AT_rich Low_complexity Low_complexity 1 26 0 349 226 250 16 chr20 38524628 38524752 -33629130 - MER5A DNA MER1_type -25 164 12 346 221 68 126 chr20 38525164 38525354 -33628528 - Charlie8 DNA MER1_type -2238 179 1 645 121 0 0 chr20 38526041 38526132 -33627750 + AluSp/q SINE Alu 208 298 -15 2069 97 3 26 chr20 38526189 38526499 -33627383 + AluSp SINE Alu 2 304 -9 670 226 18 12 chr20 38526640 38526804 -33627078 + L1ME1 LINE L1 5504 5668 -498 859 118 0 22 chr20 38526808 38526944 -33626938 + FLAM_C SINE Alu 1 133 -10 469 118 11 11 chr20 38526953 38527046 -33626836 + (TCTCCC)n Simple_repeat Simple_repeat 3 95 0 5832 65 26 12 chr20 38527055 38528033 -33625849 + SVA Other Other 2 866 -520 6542 60 27 33 chr20 38528050 38529049 -33624833 + SVA Other Other 433 1425 0 843 151 0 0 chr20 38529049 38529175 -33624707 + AluJb SINE Alu 148 273 -39 1565 207 90 49 chr20 38529184 38529652 -33624230 + L1ME1 LINE L1 5676 6162 -4 1036 215 15 89 chr20 38529835 38530005 -33623877 - AluJo SINE Alu 0 302 166 2237 96 0 3 chr20 38530005 38530306 -33623576 - AluSg SINE Alu -10 300 1 1036 215 15 89 chr20 38530306 38530460 -33623422 - AluJo SINE Alu -136 166 2 1563 140 3 120 chr20 38532157 38532499 -33621383 - AluJb SINE Alu 0 302 1 942 101 0 0 chr20 38533279 38533417 -33620465 + L1MA3 LINE L1 6168 6305 0 2045 116 142 36 chr20 38533656 38534043 -33619839 + MSTA LTR MaLR 1 428 0 296 295 56 14 chr20 38534086 38534192 -33619690 + MIR SINE MIR 13 121 -87 1463 208 25 59 chr20 38534202 38534606 -33619276 + MLT1C LTR MaLR 1 390 -77 301 274 65 59 chr20 38535383 38535536 -33618346 - MIR SINE MIR -13 249 96 2220 113 0 0 chr20 38535575 38535886 -33617996 - AluSx SINE Alu -1 311 1 303 259 176 0 chr20 38535886 38535971 -33617911 - L1M4 LINE L1 -2119 4027 3928 2162 81 14 0 chr20 38536913 38537198 -33616684 - AluSp SINE Alu -24 289 1 1469 156 88 3 chr20 38537805 38538088 -33615794 + AluJb SINE Alu 1 307 -5 204 279 0 0 chr20 38538092 38538135 -33615747 + C-rich Low_complexity Low_complexity 2 44 0 6177 110 17 25 chr20 38538135 38539896 -33613986 + SVA Other Other 1 1381 -5 219 36 0 0 chr20 38540046 38540074 -33613808 + (A)n Simple_repeat Simple_repeat 1 28 0 235 264 0 0 chr20 38540115 38540168 -33613714 + MER5A DNA MER1_type 1 53 -136 1794 125 24 3 chr20 38540168 38540457 -33613425 - AluSx SINE Alu -17 295 1 2386 60 10 3 chr20 38540464 38540766 -33613116 - AluSg SINE Alu -6 304 1 267 189 38 0 chr20 38540768 38540821 -33613061 + MER5A DNA MER1_type 128 182 -7 2071 103 0 20 chr20 38540851 38541151 -33612731 - AluSx SINE Alu -18 294 1 368 334 64 60 chr20 38541254 38541568 -33612314 - L3 LINE CR1 -213 1364 1050 1832 79 30 75 chr20 38542198 38542503 -33611379 - AluSq SINE Alu -17 296 6 1619 150 26 19 chr20 38542728 38543035 -33610847 + AluSg SINE Alu 2 310 0 1561 168 0 8 chr20 38543132 38543400 -33610482 + AluSx SINE Alu 2 267 -45 1954 133 7 0 chr20 38543764 38544057 -33609825 - AluJb SINE Alu -17 295 1 6548 204 33 30 chr20 38544978 38545524 -33608358 - L1M3 LINE L1 -641 5539 4996 1730 139 3 62 chr20 38545524 38545697 -33608185 - AluJb SINE Alu -21 291 142 2223 113 0 0 chr20 38545697 38546006 -33607876 - AluSx SINE Alu -3 309 1 1730 139 3 62 chr20 38546006 38546141 -33607741 - AluJb SINE Alu -170 142 1 6548 204 33 30 chr20 38546141 38547115 -33606767 - L1M3 LINE L1 -1184 4996 4006 1290 213 4 4 chr20 38547115 38547354 -33606528 - MER8 DNA MER2_type 0 239 1 6548 204 33 30 chr20 38547354 38547729 -33606153 - L1M3 LINE L1 -2174 4006 3634 791 231 6 0 chr20 38548026 38548186 -33605696 - FRAM SINE Alu -8 168 8 1924 138 7 0 chr20 38548197 38548494 -33605388 - AluSx SINE Alu -13 299 1 1556 185 3 13 chr20 38548522 38548830 -33605052 + AluJo SINE Alu 1 305 -7 657 193 17 0 chr20 38549070 38549189 -33604693 - FAM SINE Alu -45 140 20 1600 149 30 17 chr20 38549217 38549512 -33604370 - AluJo SINE Alu -9 303 5 2081 124 7 0 chr20 38549546 38549853 -33604029 - AluSc SINE Alu 0 309 1 2045 96 10 7 chr20 38549859 38550151 -33603731 - AluSg SINE Alu -16 294 2 2323 98 0 0 chr20 38550153 38550459 -33603423 - AluSx SINE Alu -6 306 1 23 0 0 0 chr20 38550645 38550668 -33603214 + AT_rich Low_complexity Low_complexity 1 23 0 885 233 170 12 chr20 38550776 38551049 -33602833 + AluSg SINE Alu 1 300 0 272 67 67 0 chr20 38551090 38551135 -33602747 + GA-rich Low_complexity Low_complexity 3 50 0 1765 163 3 3 chr20 38551228 38551516 -33602366 + AluJb SINE Alu 7 294 -18 288 0 0 0 chr20 38551752 38551784 -33602098 + (TG)n Simple_repeat Simple_repeat 1 32 0 2028 99 0 21 chr20 38551784 38552066 -33601816 - AluSc SINE Alu -33 276 1 1879 144 16 0 chr20 38552797 38553102 -33600780 + AluSx SINE Alu 1 310 -2 920 193 0 0 chr20 38553168 38553334 -33600548 - AluJb SINE Alu -9 303 138 193 214 0 24 chr20 38553960 38554002 -33599880 - MIR SINE MIR -10 252 212 28 71 0 0 chr20 38554154 38554210 -33599672 + AT_rich Low_complexity Low_complexity 1 56 0 2225 100 0 0 chr20 38554216 38554516 -33599366 - AluSx SINE Alu -12 300 1 11432 96 26 0 chr20 38554706 38556246 -33597636 - THE1A-int LTR MaLR 0 1580 1 2762 73 3 0 chr20 38556248 38556591 -33597291 - THE1A LTR MaLR -11 344 1 11414 102 14 12 chr20 38557046 38558774 -33595108 - L1P3 LINE L1 -2532 3929 2198 5856 111 8 0 chr20 38558777 38559576 -33594306 - L1P3 LINE L1 -5642 819 15 2836 148 19 32 chr20 38561146 38561673 -33592209 + L1MB4 LINE L1 5661 6180 0 425 79 48 0 chr20 38562361 38562424 -33591458 - Alu SINE Alu -242 67 2 1792 173 0 0 chr20 38563016 38563311 -33590571 - AluJb SINE Alu -17 295 1 1994 141 0 3 chr20 38563803 38564107 -33589775 - AluSx SINE Alu -9 303 1 2706 3 0 0 chr20 38564462 38564762 -33589120 - AluYa8 SINE Alu -10 300 1 3259 229 86 0 chr20 38564765 38565683 -33588199 - L1 LINE L1 -1092 5054 4015 722 139 96 0 chr20 38565784 38565899 -33587983 - AluSx SINE Alu -150 162 37 3117 154 11 6 chr20 38565899 38566432 -33587450 - MSTA-int LTR MaLR -1115 536 1 2155 125 135 23 chr20 38566432 38566746 -33587136 - MSTA LTR MaLR 0 428 62 1340 218 106 24 chr20 38566746 38567076 -33586806 + LTR18A LTR ERVL 1 357 0 2155 125 135 23 chr20 38567076 38567146 -33586736 - MSTA LTR MaLR -366 62 1 185 292 0 21 chr20 38567240 38567288 -33586594 - MER5B DNA MER1_type -29 149 103 2722 145 37 29 chr20 38567320 38567384 -33586498 - LOR1a LTR ERV1 0 497 435 2184 112 3 6 chr20 38567384 38567697 -33586185 + AluSq SINE Alu 2 313 0 2722 145 37 29 chr20 38567697 38568114 -33585768 - LOR1a LTR ERV1 -62 435 12 294 59 0 0 chr20 38568114 38568148 -33585734 - LOR1a LTR ERV1 -463 34 1 318 125 0 54 chr20 38568148 38568204 -33585678 - LOR1a-int LTR ERV1 0 8120 8068 2152 122 0 3 chr20 38568207 38568518 -33585364 - AluSx SINE Alu -2 310 1 5507 140 20 32 chr20 38568587 38569290 -33584592 - LOR1a-int LTR ERV1 -145 7060 6369 2214 82 28 0 chr20 38569290 38569581 -33584301 + AluSx SINE Alu 1 299 -13 5507 140 20 32 chr20 38569581 38569771 -33584111 - LOR1a-int LTR ERV1 -836 6369 6178 2328 83 0 13 chr20 38569771 38570084 -33583798 + AluY SINE Alu 1 309 -2 5478 273 74 62 chr20 38570084 38571094 -33582788 - MER50-int LTR ERV1 -3836 3369 2373 2142 123 0 0 chr20 38571094 38571395 -33582487 + AluSx SINE Alu 1 301 -11 5478 273 74 62 chr20 38571395 38571921 -33581961 - MER50-int LTR ERV1 -4832 2373 1855 2233 69 17 0 chr20 38571921 38572210 -33581672 + AluY SINE Alu 2 295 -16 5478 273 74 62 chr20 38572210 38572749 -33581133 - MER50-int LTR ERV1 -5350 1855 1263 2155 93 0 0 chr20 38572749 38573040 -33580842 - AluSc SINE Alu -18 291 1 5478 273 74 62 chr20 38573040 38573154 -33580728 - MER50-int LTR ERV1 -5942 1263 1152 1020 165 0 0 chr20 38573155 38573319 -33580563 + AluSx SINE Alu 1 164 -148 1991 136 0 0 chr20 38573521 38573816 -33580066 + AluSg SINE Alu 1 295 -15 1866 145 17 3 chr20 38574404 38574700 -33579182 + AluJo SINE Alu 1 300 -12 191 229 311 0 chr20 38574703 38574764 -33579118 + MIR SINE MIR 28 107 -155 1578 157 0 66 chr20 38575087 38575255 -33578627 - AluJo SINE Alu -13 299 160 2227 93 20 0 chr20 38575255 38575557 -33578325 - AluSx SINE Alu -4 308 1 1578 157 0 66 chr20 38575557 38575707 -33578175 - AluJo SINE Alu -152 160 2 235 313 87 0 chr20 38575987 38576102 -33577780 + L2 LINE L2 2925 3049 -223 323 285 47 64 chr20 38576280 38576456 -33577426 + MIR SINE MIR 15 194 -14 * 378 301 151 11 chr20 38576415 38576461 -33577421 - MIR SINE MIR 0 262 224 2304 63 3 0 chr20 38576461 38576790 -33577092 - AluSx SINE Alu 0 330 1 378 301 151 11 chr20 38576790 38576928 -33576954 - MIR SINE MIR -38 224 51 1745 78 0 13 chr20 38576957 38577187 -33576695 - AluY SINE Alu -8 303 77 1786 162 30 0 chr20 38577227 38577523 -33576359 + AluJo SINE Alu 2 306 -6 2344 83 0 3 chr20 38577599 38577900 -33575982 + AluSq SINE Alu 1 300 -13 290 247 49 0 chr20 38577984 38578065 -33575817 - MIR SINE MIR -115 147 63 731 179 106 64 chr20 38578460 38578777 -33575105 + MLT1D LTR MaLR 1 303 -202 2067 114 7 7 chr20 38578777 38579075 -33574807 - AluSx SINE Alu -14 298 1 2345 54 0 14 chr20 38579080 38579377 -33574505 - AluY SINE Alu -14 297 5 731 179 106 64 chr20 38579377 38579438 -33574444 + MLT1D LTR MaLR 306 496 -9 812 285 36 97 chr20 38579461 38579481 -33574401 - L2 LINE L2 -7 3306 3286 2307 76 10 0 chr20 38579481 38579772 -33574110 + AluY SINE Alu 1 294 -17 812 285 36 97 chr20 38579772 38579941 -33573941 - L2 LINE L2 -27 3286 3108 1826 117 38 73 chr20 38579941 38580257 -33573625 + AluSx SINE Alu 1 305 -7 812 285 36 97 chr20 38580257 38580561 -33573321 - L2 LINE L2 -205 3108 2842 1255 246 38 0 chr20 38580608 38580788 -33573094 - AluJb SINE Alu -8 304 107 396 0 0 0 chr20 38580788 38580832 -33573050 + (TG)n Simple_repeat Simple_repeat 2 45 0 1255 246 38 0 chr20 38580832 38580944 -33572938 - AluJb SINE Alu -205 107 1 211 271 0 0 chr20 38581135 38581183 -33572699 + L2 LINE L2 3266 3313 0 2266 109 0 0 chr20 38581403 38581707 -33572175 + AluSx SINE Alu 1 304 -8 337 358 128 0 chr20 38582647 38582826 -33571056 + L3 LINE CR1 899 1100 -477 2288 84 0 0 chr20 38582869 38583182 -33570700 + AluSg SINE Alu 1 313 0 857 136 0 0 chr20 38583187 38583312 -33570570 + FLAM_C SINE Alu 1 125 -18 309 51 0 0 chr20 38583314 38583353 -33570529 + (TAA)n Simple_repeat Simple_repeat 2 40 0 491 119 0 0 chr20 38583397 38583464 -33570418 + AluS SINE Alu 1 67 -246 834 197 0 0 chr20 38583472 38583614 -33570268 + FRAM SINE Alu 16 157 -19 305 271 12 24 chr20 38583614 38583651 -33570231 - L1ME4a LINE L1 -26 6095 6059 1994 129 33 3 chr20 38583651 38583954 -33569928 + AluSx SINE Alu 1 312 0 305 271 12 24 chr20 38583954 38584001 -33569881 - L1ME4a LINE L1 -62 6059 6012 626 195 51 0 chr20 38584004 38584122 -33569760 + MER5A DNA MER1_type 1 124 -65 230 269 0 0 chr20 38584211 38584263 -33569619 + L2 LINE L2 3221 3272 0 1460 124 0 0 chr20 38584933 38585135 -33568747 + AluSg/x SINE Alu 97 298 -14 2034 102 7 10 chr20 38585638 38585932 -33567950 + AluSx SINE Alu 1 293 -19 403 297 98 51 chr20 38585937 38586173 -33567709 - MIR SINE MIR -8 254 8 309 302 205 31 chr20 38586180 38586468 -33567414 + L2 LINE L2 2935 3272 0 1814 171 0 3 chr20 38586484 38586789 -33567093 + AluJo SINE Alu 1 304 -8 1247 111 40 58 chr20 38586848 38587073 -33566809 + AluJo SINE Alu 72 292 -20 222 289 83 41 chr20 38587489 38587610 -33566272 - MIR SINE MIR -109 153 28 1205 208 95 3 chr20 38587642 38587969 -33565913 + Charlie4a DNA MER1_type 30 386 -122 2191 112 10 0 chr20 38587969 38588272 -33565610 - AluSp SINE Alu -7 306 1 1171 187 0 0 chr20 38588345 38588548 -33565334 - AluJo SINE Alu -9 303 101 2011 122 13 3 chr20 38589160 38589463 -33564419 + AluSx SINE Alu 1 306 -6 1496 247 46 2 chr20 38589701 38590114 -33563768 + L1ME1 LINE L1 5713 6143 -23 681 308 136 19 chr20 38590242 38590758 -33563124 + L2 LINE L2 2735 3309 -4 2456 73 0 0 chr20 38591688 38591988 -33561894 + AluSx SINE Alu 1 300 -12 313 178 137 0 chr20 38592243 38592316 -33561566 - MIR SINE MIR -132 130 48 413 270 119 38 chr20 38592370 38592555 -33561327 - MIR SINE MIR 0 262 63 369 0 0 0 chr20 38592616 38592657 -33561225 + (TG)n Simple_repeat Simple_repeat 1 41 0 441 281 82 7 chr20 38593054 38593189 -33560693 + MIR3 SINE MIR 35 179 -29 437 247 117 31 chr20 38594114 38594276 -33559606 - MIR SINE MIR -77 185 10 287 319 111 28 chr20 38594604 38594820 -33559062 - MIR SINE MIR -25 237 4 322 206 0 14 chr20 38595084 38595157 -33558725 - L2 LINE L2 -1 3312 3241 249 159 0 0 chr20 38595753 38595797 -33558085 + (TG)n Simple_repeat Simple_repeat 2 45 0 317 213 27 13 chr20 38596647 38596722 -33557160 + L2 LINE L2 3197 3272 0 252 231 13 51 chr20 38597099 38597177 -33556705 + MIR3 SINE MIR 116 190 -18 360 0 0 0 chr20 38597225 38597265 -33556617 + (CA)n Simple_repeat Simple_repeat 2 41 0 252 0 0 0 chr20 38597307 38597335 -33556547 + (CA)n Simple_repeat Simple_repeat 2 29 0 540 0 0 0 chr20 38597377 38597437 -33556445 + (CA)n Simple_repeat Simple_repeat 2 61 0 432 252 68 97 chr20 38597584 38597704 -33556178 - MIR SINE MIR 0 262 140 2213 93 3 3 chr20 38597704 38598004 -33555878 - AluSq SINE Alu -13 300 1 432 252 68 97 chr20 38598004 38598141 -33555741 - MIR SINE MIR -122 140 14 285 237 0 26 chr20 38598438 38598514 -33555368 - L3 LINE CR1 -101 1476 1403 248 281 44 26 chr20 38598974 38599088 -33554794 - MIR3 SINE MIR -81 127 12 518 299 86 21 chr20 38599536 38599723 -33554159 - MIR SINE MIR -10 252 54 211 216 0 0 chr20 38600245 38600282 -33553600 - MIR SINE MIR -58 150 114 30 93 0 0 chr20 38601736 38601822 -33552060 + GC_rich Low_complexity Low_complexity 1 86 0 267 217 22 65 chr20 38602489 38602673 -33551209 + (CCCCG)n Simple_repeat Simple_repeat 5 180 0 2506 65 0 0 chr20 38603317 38603627 -33550255 + AluSg SINE Alu 1 310 0 212 281 6 29 chr20 38604018 38604189 -33549693 + CT-rich Low_complexity Low_complexity 1 167 0 304 202 71 99 chr20 38605356 38605400 -33548482 - MIR SINE MIR -60 148 104 1781 182 148 81 chr20 38605400 38605956 -33547926 + MLT1G1 LTR MaLR 1 593 -2 304 202 71 99 chr20 38605956 38606037 -33547845 - MIR SINE MIR -104 104 26 213 204 23 0 chr20 38606383 38606427 -33547455 - L2 LINE L2 -246 3067 3023 2221 113 0 3 chr20 38606431 38606740 -33547142 - AluSc SINE Alu -1 308 1 2394 63 23 3 chr20 38606766 38607069 -33546813 - AluY SINE Alu -2 309 1 1916 107 48 14 chr20 38607114 38607403 -33546479 - AluSq SINE Alu -14 299 1 1310 136 0 15 chr20 38607408 38607582 -33546300 - AluSg/x SINE Alu -5 305 133 2159 127 0 0 chr20 38607582 38607881 -33546001 - AluSx SINE Alu -13 299 1 1310 136 0 15 chr20 38607881 38607904 -33545978 - AluSg/x SINE Alu -177 133 111 295 261 77 56 chr20 38608048 38608243 -33545639 - L1ME4a LINE L1 -131 5990 5792 2377 74 0 3 chr20 38608243 38608553 -33545329 + AluY SINE Alu 1 309 -2 2061 98 4 7 chr20 38608560 38608837 -33545045 + AluSp SINE Alu 1 276 -37 198 0 0 0 chr20 38608842 38608864 -33545018 + (CAA)n Simple_repeat Simple_repeat 2 23 0 1327 161 18 5 chr20 38609012 38609236 -33544646 + 7SLRNA srpRNA srpRNA 1 227 -93 1941 135 7 10 chr20 38609236 38609539 -33544343 + AluSx SINE Alu 1 302 -10 1625 155 29 41 chr20 38609541 38609857 -33544025 + AluJo SINE Alu 1 312 0 2040 147 0 10 chr20 38609939 38610253 -33543629 - AluSx SINE Alu -1 311 1 2109 117 0 29 chr20 38610253 38610560 -33543322 - AluSx SINE Alu -14 298 1 198 299 250 0 chr20 38610961 38611105 -33542777 + L3 LINE CR1 1394 1573 -4 1871 164 0 10 chr20 38611364 38611669 -33542213 - AluJb SINE Alu -10 302 1 221 286 18 0 chr20 38612187 38612243 -33541639 + L3 LINE CR1 1433 1489 -88 738 226 72 15 chr20 38612383 38612578 -33541304 - MIR SINE MIR -54 208 3 472 282 134 10 chr20 38612732 38613023 -33540859 + L1ME4a LINE L1 5577 5903 -218 2179 116 0 0 chr20 38613027 38613329 -33540553 + AluSx SINE Alu 1 302 -10 238 228 105 0 chr20 38613391 38613505 -33540377 + L1ME4a LINE L1 5996 6121 0 1489 104 136 16 chr20 38613512 38613784 -33540098 + AluSg1 SINE Alu 1 302 0 1628 86 0 0 chr20 38613865 38614074 -33539808 + AluY SINE Alu 96 304 -7 1957 141 10 0 chr20 38614219 38614517 -33539365 - AluJb SINE Alu -11 301 1 338 331 17 36 chr20 38614592 38614757 -33539125 - MIR3 SINE MIR -8 200 38 608 195 6 0 chr20 38615522 38615696 -33538186 + (CA)n Simple_repeat Simple_repeat 1 175 0 2095 127 16 0 chr20 38616017 38616324 -33537558 + AluSx SINE Alu 1 312 0 209 189 0 0 chr20 38616839 38616876 -33537006 + GA-rich Low_complexity Low_complexity 2 38 0 207 326 51 10 chr20 38617047 38617145 -33536737 + MIR SINE MIR 41 142 -66 2105 132 0 0 chr20 38617212 38617515 -33536367 + AluSx SINE Alu 1 303 -9 578 242 37 31 chr20 38617640 38617801 -33536081 + MIR SINE MIR 14 175 -87 429 247 68 48 chr20 38618274 38618420 -33535462 - L2 LINE L2 0 3313 3165 1568 118 12 144 chr20 38618473 38618812 -33535070 + AluJo SINE Alu 2 295 -17 358 275 28 84 chr20 38618812 38618954 -33534928 + L1ME4a LINE L1 5941 6074 -47 366 23 0 0 chr20 38618972 38619015 -33534867 + (TA)n Simple_repeat Simple_repeat 2 44 0 2135 116 0 7 chr20 38619016 38619309 -33534573 - AluSx SINE Alu -21 291 1 199 250 78 0 chr20 38619479 38619543 -33534339 + MIR3 SINE MIR 115 183 -25 1893 157 10 3 chr20 38620013 38620312 -33533570 + AluJb SINE Alu 1 301 -11 659 308 57 36 chr20 38620481 38620868 -33533014 - L2 LINE L2 -2143 1171 777 1173 174 116 58 chr20 38621174 38621450 -33532432 + AluJo SINE Alu 1 292 -10 241 281 62 52 chr20 38621541 38621637 -33532245 - L3 LINE CR1 -1070 507 411 2483 258 87 39 chr20 38621807 38622049 -33531833 + L2 LINE L2 2049 2278 -1035 1938 153 3 0 chr20 38622049 38622349 -33531533 - AluJb SINE Alu -11 301 1 2483 258 87 39 chr20 38622349 38622725 -33531157 + L2 LINE L2 2278 2635 -678 2053 121 0 0 chr20 38622725 38623030 -33530852 + AluSx SINE Alu 1 305 0 2483 258 87 39 chr20 38623030 38623388 -33530494 + L2 LINE L2 2635 2975 -338 1661 162 3 21 chr20 38623388 38623678 -33530204 + AluJo SINE Alu 1 285 -27 698 91 0 40 chr20 38623576 38623678 -33530204 + AluJo/FRAM SINE Alu 188 320 0 316 0 0 0 chr20 38623678 38623713 -33530169 + (TAAA)n Simple_repeat Simple_repeat 2 180 0 2483 258 87 39 chr20 38623713 38623786 -33530096 + L2 LINE L2 2975 3043 -270 2459 66 7 0 chr20 38623786 38624090 -33529792 - AluSq SINE Alu -7 306 1 2483 258 87 39 chr20 38624090 38624248 -33529634 + L2 LINE L2 3043 3313 0 494 299 177 4 chr20 38624754 38625008 -33528874 - L2 LINE L2 -186 3127 2830 1322 171 6 108 chr20 38625042 38625227 -33528655 - AluJo SINE Alu -2 300 162 2077 98 7 3 chr20 38625227 38625524 -33528358 + AluSc SINE Alu 1 298 -11 1322 171 6 108 chr20 38625524 38625671 -33528211 - AluJo SINE Alu -140 162 2 278 86 0 0 chr20 38625679 38625714 -33528168 - Alu SINE Alu -259 40 6 504 254 76 16 chr20 38625733 38625918 -33527964 - L2 LINE L2 -519 2795 2600 186 315 112 0 chr20 38627014 38627103 -33526779 + MIR3 SINE MIR 87 185 -23 1186 116 0 0 chr20 38627150 38627322 -33526560 - AluSg/x SINE Alu -17 293 122 2378 72 3 0 chr20 38627338 38627642 -33526240 + AluY SINE Alu 1 305 -6 1957 127 0 3 chr20 38627652 38627977 -33525905 + AluSx SINE Alu 1 324 0 235 250 171 7 chr20 38628693 38628823 -33525059 - L1ME4a LINE L1 -10 6111 5955 189 0 0 0 chr20 38628823 38628844 -33525038 + (TG)n Simple_repeat Simple_repeat 2 22 0 1997 93 6 45 chr20 38629302 38629690 -33524192 - AluSq SINE Alu 0 376 1 1181 114 0 0 chr20 38630608 38630774 -33523108 - AluSg/x SINE Alu -19 291 126 799 164 0 15 chr20 38631423 38631557 -33522325 + FLAM_A SINE Alu 1 132 -1 731 216 99 39 chr20 38632700 38633031 -33520851 + LTR33A LTR ERVL 1 386 -137 1616 108 18 0 chr20 38633159 38633382 -33520500 - AluSg/x SINE Alu -21 291 65 2143 110 0 0 chr20 38633398 38633688 -33520194 + AluSx SINE Alu 1 290 -22 922 206 0 0 chr20 38633785 38633950 -33519932 - FRAM SINE Alu -11 165 1 223 196 39 20 chr20 38634000 38634051 -33519831 + L2 LINE L2 2698 2749 -565 256 293 40 98 chr20 38634093 38634318 -33519564 + L2 LINE L2 2870 3081 -191 25 0 0 0 chr20 38634398 38634423 -33519459 + AT_rich Low_complexity Low_complexity 1 25 0 190 303 124 22 chr20 38634434 38634523 -33519359 + L2 LINE L2 3176 3273 -40 1715 120 51 4 chr20 38634703 38634978 -33518904 - MER2 DNA MER2_type 0 345 58 354 49 0 0 chr20 38634978 38635043 -33518839 - AluY SINE Alu 0 305 241 1155 50 0 7 chr20 38635045 38635186 -33518696 - AluY SINE Alu -171 140 1 351 176 0 108 chr20 38635187 38635261 -33518621 - MER2 DNA MER2_type -278 67 2 2066 104 3 3 chr20 38635468 38635755 -33518127 + AluSg SINE Alu 1 287 -23 23 0 0 0 chr20 38635761 38635784 -33518098 + AT_rich Low_complexity Low_complexity 1 23 0 189 0 0 0 chr20 38636161 38636182 -33517700 + (TTCA)n Simple_repeat Simple_repeat 1 21 0 1625 179 21 0 chr20 38636956 38637241 -33516641 - AluJb SINE Alu -21 291 1 2319 94 3 0 chr20 38637545 38637853 -33516029 + AluSg SINE Alu 1 309 -1 1430 146 0 64 chr20 38638097 38638364 -33515518 + AluSx SINE Alu 56 305 -7 312 313 134 6 chr20 38638597 38638732 -33515150 - L2 LINE L2 -1355 1959 1794 2137 100 0 0 chr20 38638732 38639023 -33514859 + AluSg SINE Alu 6 296 -14 312 313 134 6 chr20 38639023 38639066 -33514816 - L2 LINE L2 -1520 1794 1758 1368 85 64 110 chr20 38639072 38639164 -33514718 + L1MA5A LINE L1 6026 6121 -176 2154 112 0 0 chr20 38639164 38639459 -33514423 - AluSx SINE Alu -17 295 1 1368 85 64 110 chr20 38639459 38639484 -33514398 + L1MA5A LINE L1 6121 6146 -151 2004 103 7 23 chr20 38639484 38639785 -33514097 - AluSc SINE Alu -13 296 1 1368 85 64 110 chr20 38639785 38639948 -33513934 + L1MA5A LINE L1 6146 6294 -3 1234 135 0 0 chr20 38640089 38640274 -33513608 - AluJb SINE Alu -23 289 105 448 169 0 0 chr20 38640275 38640352 -33513530 + AluJ/FRAM SINE Alu 219 295 -17 625 266 0 12 chr20 38640353 38640367 -33513515 - MER3 DNA MER1_type 6 168 155 1867 172 0 0 chr20 38640367 38640664 -33513218 + AluJo SINE Alu 1 297 -15 625 266 0 12 chr20 38640664 38640818 -33513064 - MER3 DNA MER1_type -7 155 2 568 314 91 66 chr20 38640820 38641106 -33512776 - L2 LINE L2 -1750 1564 1287 1994 104 3 7 chr20 38641106 38641393 -33512489 - AluSx SINE Alu -24 288 3 568 314 91 66 chr20 38641393 38641657 -33512225 - L2 LINE L2 -2027 1287 1031 2090 119 0 3 chr20 38641657 38641952 -33511930 - AluSx SINE Alu -18 294 1 568 314 91 66 chr20 38641952 38642177 -33511705 - L2 LINE L2 -2283 1031 768 2022 88 0 7 chr20 38642179 38642451 -33511431 - AluSc SINE Alu -38 271 2 2104 106 10 6 chr20 38642453 38642764 -33511118 - AluSx SINE Alu 0 312 1 27 73 0 0 chr20 38642797 38642852 -33511030 + AT_rich Low_complexity Low_complexity 1 55 0 287 100 0 0 chr20 38642961 38643011 -33510871 + L1ME4a LINE L1 6061 6110 -11 2157 86 0 0 chr20 38643350 38643654 -33510228 + AluSg SINE Alu 1 304 0 486 255 172 21 chr20 38644010 38644202 -33509680 + MIR SINE MIR 15 235 -27 2050 120 0 7 chr20 38644602 38644901 -33508981 + AluSq SINE Alu 1 297 -16 319 241 93 9 chr20 38644911 38645019 -33508863 + L1MC5 LINE L1 7754 7870 -91 1985 134 7 0 chr20 38645069 38645374 -33508508 + AluSx SINE Alu 1 307 -5 451 217 108 16 chr20 38645379 38645508 -33508374 + L1MC5 LINE L1 7726 7866 -95 2085 129 0 0 chr20 38645710 38646005 -33507877 - AluSx SINE Alu -17 295 1 1424 147 9 120 chr20 38646005 38646338 -33507544 - AluJo SINE Alu -5 297 2 364 238 0 0 chr20 38646383 38646446 -33507436 - FRAM/FAM SINE Alu -106 60 1 1061 95 14 0 chr20 38646453 38646600 -33507282 - AluSg1 SINE Alu -10 300 152 681 79 11 0 chr20 38646600 38646689 -33507193 - AluSg1 SINE Alu -219 90 1 1910 140 3 10 chr20 38646775 38647089 -33506793 - AluSx SINE Alu 0 312 1 1651 170 20 3 chr20 38647145 38647451 -33506431 - AluJb SINE Alu -1 311 1 660 207 126 11 chr20 38647486 38647660 -33506222 + MER5C DNA MER1_type 127 320 -4 242 252 126 19 chr20 38647805 38647851 -33506031 + LTR67 LTR ERVL 441 481 -76 2134 103 0 0 chr20 38647851 38648175 -33505707 - AluSx SINE Alu 0 312 1 242 252 126 19 chr20 38648175 38648231 -33505651 + LTR67 LTR ERVL 481 554 -3 2241 87 0 31 chr20 38648300 38648621 -33505261 + AluSq SINE Alu 1 311 -2 1063 157 0 108 chr20 38648795 38648858 -33505024 + AluJb SINE Alu 83 151 -161 2358 54 10 0 chr20 38648858 38649153 -33504729 + AluY SINE Alu 1 298 -13 1063 157 0 108 chr20 38649153 38649338 -33504544 + AluJb SINE Alu 151 304 -8 2024 134 0 0 chr20 38649361 38649659 -33504223 + AluSx SINE Alu 1 298 -14 418 323 124 0 chr20 38649661 38649847 -33504035 - MIR SINE MIR -5 257 49 720 179 8 0 chr20 38649886 38650003 -33503879 + FLAM_C SINE Alu 1 118 -15 30 45 0 0 chr20 38650003 38650047 -33503835 + AT_rich Low_complexity Low_complexity 1 44 0 475 250 161 6 chr20 38650421 38650589 -33503293 - MIR SINE MIR -24 238 45 189 74 0 0 chr20 38650603 38650630 -33503252 + (CAA)n Simple_repeat Simple_repeat 2 28 0 1313 178 0 21 chr20 38651778 38652020 -33501862 + AluJb SINE Alu 64 300 -12 812 176 10 107 chr20 38652020 38652052 -33501830 + Tigger2 DNA MER2_type 2534 2568 -150 1487 199 27 7 chr20 38652052 38652344 -33501538 + AluJo SINE Alu 1 298 -14 812 176 10 107 chr20 38652344 38652445 -33501437 + Tigger2 DNA MER2_type 2568 2643 -75 1886 163 0 0 chr20 38652445 38652752 -33501130 + AluSx SINE Alu 1 307 -5 812 176 10 107 chr20 38652752 38652822 -33501060 + Tigger2 DNA MER2_type 2643 2718 0 2349 58 0 7 chr20 38652868 38653162 -33500720 + AluY SINE Alu 1 292 -19 664 262 174 0 chr20 38653168 38653340 -33500542 + MIR SINE MIR 29 230 -32 860 165 0 0 chr20 38653341 38653468 -33500414 + FLAM_A SINE Alu 1 127 -6 24 0 0 0 chr20 38653533 38653557 -33500325 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr20 38653888 38653909 -33499973 + AT_rich Low_complexity Low_complexity 1 21 0 1982 134 3 0 chr20 38654362 38654668 -33499214 + AluSg SINE Alu 1 307 -3 22 0 0 0 chr20 38654901 38654923 -33498959 + AT_rich Low_complexity Low_complexity 1 22 0 591 114 155 23 chr20 38655010 38655205 -33498677 - AluJb SINE Alu -18 294 37 25 31 0 0 chr20 38655329 38655361 -33498521 + AT_rich Low_complexity Low_complexity 1 32 0 2105 125 0 10 chr20 38655393 38655706 -33498176 + AluSx SINE Alu 3 312 0 1869 159 0 0 chr20 38655729 38656019 -33497863 + AluJb SINE Alu 2 291 -21 1453 189 0 8 chr20 38657003 38657267 -33496615 - AluJo SINE Alu -30 282 21 1790 128 27 20 chr20 38657355 38657653 -33496229 + AluSx SINE Alu 1 300 -12 1718 170 6 13 chr20 38657671 38657982 -33495900 + AluJo SINE Alu 1 309 -3 2180 97 0 3 chr20 38657984 38658284 -33495598 + AluSc SINE Alu 1 299 -10 592 253 18 18 chr20 38658293 38658459 -33495423 + L1MC4a LINE L1 7210 7375 -433 1167 133 0 0 chr20 38658561 38658726 -33495156 - AluSq SINE Alu -145 168 4 1663 172 80 71 chr20 38658734 38659143 -33494739 + L1MC4 LINE L1 7445 7849 -193 1308 196 36 11 chr20 38659143 38659418 -33494464 - AluJo SINE Alu -30 282 1 1663 172 80 71 chr20 38659418 38659429 -33494453 + L1MC4 LINE L1 7849 7858 -184 1534 147 135 4 chr20 38659429 38659688 -33494194 - AluJb SINE Alu -9 293 1 1663 172 80 71 chr20 38659688 38659742 -33494140 + L1MC4 LINE L1 7858 7924 -118 2138 95 7 3 chr20 38659743 38660038 -33493844 - AluY SINE Alu -15 296 1 537 224 0 0 chr20 38660067 38660174 -33493708 + AluSg/x SINE Alu 187 293 -17 207 0 0 0 chr20 38660177 38660200 -33493682 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 282 173 0 19 chr20 38660357 38660409 -33493473 + AluJo/FLAM SINE Alu 78 128 -174 721 206 7 7 chr20 38660409 38660545 -33493337 + FLAM_A SINE Alu 2 137 -5 418 101 58 0 chr20 38660566 38660635 -33493247 - LTR23 LTR ERV1 0 437 365 1500 181 4 11 chr20 38660707 38660988 -33492894 + AluJo SINE Alu 1 279 -33 248 197 0 30 chr20 38660989 38661055 -33492827 + G-rich Low_complexity Low_complexity 4 67 0 * 349 183 15 51 chr20 38661041 38661178 -33492704 + GA-rich Low_complexity Low_complexity 1 132 0 894 171 135 60 chr20 38661193 38661474 -33492408 - LTR56 LTR ERV1 -135 310 9 2239 102 3 0 chr20 38661616 38661920 -33491962 + AluSg SINE Alu 1 305 -5 660 234 188 13 chr20 38662005 38662244 -33491638 + L1ME LINE L1 13 293 -5777 629 230 117 30 chr20 38662245 38662592 -33491290 + L1ME LINE L1 5078 5461 -637 1031 176 0 0 chr20 38662820 38662990 -33490892 - FAM SINE Alu -10 175 6 2113 94 3 13 chr20 38663109 38663407 -33490475 + AluY SINE Alu 1 295 -16 2276 87 0 0 chr20 38663409 38663709 -33490173 + AluSg SINE Alu 1 300 -10 279 95 24 0 chr20 38663709 38663751 -33490131 + Charlie7 DNA MER1_type 51 93 -2519 2200 113 0 0 chr20 38663779 38664079 -33489803 + AluSx SINE Alu 1 300 -12 1552 144 90 11 chr20 38664457 38664734 -33489148 + AluSx SINE Alu 1 299 -13 812 135 8 8 chr20 38664948 38665138 -33488744 + FLAM_C SINE Alu 1 190 0 2194 102 3 0 chr20 38665218 38665523 -33488359 + AluSx SINE Alu 1 306 -6 1643 202 12 86 chr20 38665999 38666358 -33487524 + L1MD2 LINE L1 5336 5579 -780 1974 117 0 4 chr20 38666358 38666639 -33487243 + AluSx SINE Alu 1 280 -32 1643 202 12 86 chr20 38666639 38666990 -33486892 + L1MD2 LINE L1 5579 5954 -405 1233 103 5 73 chr20 38667002 38667206 -33486676 + AluSq SINE Alu 1 190 -123 1979 141 3 3 chr20 38667400 38667713 -33486169 - AluSq SINE Alu 0 313 1 2277 94 0 0 chr20 38668327 38668626 -33485256 - AluSx SINE Alu -13 299 1 1253 178 141 4 chr20 38668752 38669022 -33484860 + AluJo SINE Alu 3 309 -3 1464 153 60 43 chr20 38669061 38669361 -33484521 - AluJo SINE Alu -7 305 1 927 155 105 6 chr20 38669432 38669613 -33484269 - AluSc SINE Alu -9 300 102 2250 103 0 0 chr20 38669614 38669914 -33483968 + AluSx SINE Alu 1 300 -12 568 201 13 34 chr20 38670038 38670187 -33483695 + L1M4 LINE L1 5052 5197 -949 580 240 123 28 chr20 38670300 38670479 -33483403 - L2 LINE L2 -906 2408 2213 1429 156 128 49 chr20 38670479 38670862 -33483020 + MLT2B1 LTR ERVL 1 459 -61 2297 98 0 0 chr20 38670862 38671168 -33482714 + AluSx SINE Alu 2 307 -5 1630 198 0 0 chr20 38671353 38671651 -33482231 + AluJb SINE Alu 1 298 -14 2199 63 3 11 chr20 38673070 38673380 -33480502 + AluSp SINE Alu 1 308 0 2425 62 0 33 chr20 38673587 38673892 -33479990 - AluY SINE Alu -16 295 1 290 270 43 87 chr20 38673965 38674150 -33479732 - LTR16C LTR ERVL 0 491 315 978 183 94 0 chr20 38674192 38674383 -33479499 + MER3 DNA MER1_type 1 209 0 355 277 0 0 chr20 38674474 38674568 -33479314 + L2 LINE L2 3220 3313 0 2358 106 0 0 chr20 38674735 38675037 -33478845 + AluSg SINE Alu 2 303 -7 1280 81 0 6 chr20 38675037 38675197 -33478685 + AluY SINE Alu 37 195 -116 2369 85 3 0 chr20 38675503 38675796 -33478086 + AluSp SINE Alu 1 294 -19 231 103 0 0 chr20 38675888 38675927 -33477955 + (TATG)n Simple_repeat Simple_repeat 2 40 0 958 168 12 12 chr20 38675944 38676111 -33477771 - AluJo SINE Alu -29 283 117 262 250 132 0 chr20 38676174 38676250 -33477632 - MIR SINE MIR -106 156 71 1845 105 23 98 chr20 38676489 38676816 -33477066 + AluSx SINE Alu 1 304 0 1896 103 57 40 chr20 38676891 38677034 -33476848 + AluSq SINE Alu 1 140 -173 2255 61 44 14 chr20 38677034 38677328 -33476554 + AluY SINE Alu 1 303 -8 1896 103 57 40 chr20 38677328 38677485 -33476397 + AluSq SINE Alu 140 306 -7 360 0 0 0 chr20 38678201 38678241 -33475641 + (TG)n Simple_repeat Simple_repeat 2 41 0 291 28 0 0 chr20 38678296 38678332 -33475550 + (TG)n Simple_repeat Simple_repeat 2 37 0 309 26 0 0 chr20 38678367 38678405 -33475477 + (TG)n Simple_repeat Simple_repeat 2 39 0 351 0 0 0 chr20 38678442 38678481 -33475401 + (TG)n Simple_repeat Simple_repeat 1 39 0 1978 108 0 0 chr20 38678600 38678859 -33475023 + AluSc SINE Alu 50 308 -1 278 221 0 15 chr20 38678871 38678939 -33474943 - MER92A LTR ERV1 -47 365 299 2273 104 3 0 chr20 38678947 38679255 -33474627 + AluSx SINE Alu 1 309 -3 856 143 0 36 chr20 38679296 38679436 -33474446 + FLAM_C SINE Alu 1 135 -8 2464 71 0 7 chr20 38679439 38679747 -33474135 + AluSc SINE Alu 1 306 -3 930 220 57 86 chr20 38679747 38680061 -33473821 - MER92A LTR ERV1 -107 305 1 277 235 10 31 chr20 38682602 38682700 -33471182 - MIR SINE MIR -20 242 147 30 0 0 0 chr20 38682700 38682730 -33471152 + AT_rich Low_complexity Low_complexity 1 30 0 267 233 0 0 chr20 38682758 38682818 -33471064 - MIR SINE MIR -45 217 158 883 318 9 122 chr20 38682838 38683175 -33470707 - AluSx SINE Alu -3 299 1 2230 130 0 0 chr20 38683489 38683790 -33470092 - AluSx SINE Alu -11 301 1 9840 19 10 223 chr20 38683911 38685661 -33468221 + SVA Other Other 9 1386 0 1544 187 34 10 chr20 38686133 38686427 -33467455 - AluJo SINE Alu -4 308 8 1585 136 136 4 chr20 38686572 38686836 -33467046 + AluJb SINE Alu 1 299 -13 2459 97 0 0 chr20 38686836 38687147 -33466735 + AluSq SINE Alu 1 311 -2 2401 85 0 0 chr20 38687478 38687783 -33466099 - AluY SINE Alu -4 307 3 2101 112 11 0 chr20 38687788 38688075 -33465807 - AluSg SINE Alu -19 291 2 2456 98 0 0 chr20 38688077 38688383 -33465499 - AluSx SINE Alu -6 306 1 23 0 0 0 chr20 38688569 38688592 -33465290 + AT_rich Low_complexity Low_complexity 1 23 0 864 229 170 12 chr20 38688700 38688973 -33464909 + AluSg SINE Alu 1 300 0 311 129 43 0 chr20 38689014 38689084 -33464798 + GA-rich Low_complexity Low_complexity 3 75 0 1887 170 3 3 chr20 38689146 38689440 -33464442 + AluJb SINE Alu 1 294 -18 288 0 0 0 chr20 38689676 38689708 -33464174 + (TG)n Simple_repeat Simple_repeat 1 32 0 2152 99 0 21 chr20 38689708 38689990 -33463892 - AluSc SINE Alu -33 276 1 1940 136 18 0 chr20 38690725 38691042 -33462840 + AluSx SINE Alu 1 322 0 982 193 0 0 chr20 38691096 38691262 -33462620 - AluJb SINE Alu -9 303 138 28 71 0 0 chr20 38692082 38692138 -33461744 + AT_rich Low_complexity Low_complexity 1 56 0 2354 100 0 0 chr20 38692144 38692444 -33461438 - AluSx SINE Alu -12 300 1 2296 92 7 10 chr20 38693493 38693796 -33460086 - AluSc SINE Alu -7 302 1 1910 173 0 0 chr20 38694387 38694682 -33459200 - AluJb SINE Alu -17 295 1 2115 141 0 3 chr20 38695174 38695478 -33458404 - AluSx SINE Alu -9 303 1 2135 111 3 23 chr20 38695833 38696140 -33457742 - AluSx SINE Alu -11 301 1 957 255 136 60 chr20 38697190 38697295 -33456587 + MLT1J LTR MaLR 17 113 -398 1915 168 0 0 chr20 38697295 38697593 -33456289 + AluJb SINE Alu 3 300 -12 957 255 136 60 chr20 38697593 38697802 -33456080 + MLT1J LTR MaLR 113 373 -138 2322 88 3 3 chr20 38697802 38698097 -33455785 - AluY SINE Alu -16 295 1 957 255 136 60 chr20 38698097 38698200 -33455682 + MLT1J LTR MaLR 373 467 -44 2390 92 0 0 chr20 38698480 38698773 -33455109 + AluSg SINE Alu 2 294 -16 2179 119 6 13 chr20 38698779 38699090 -33454792 + AluSc SINE Alu 1 309 0 1711 149 30 17 chr20 38699120 38699415 -33454467 + AluJo SINE Alu 5 303 -9 652 193 17 0 chr20 38699443 38699562 -33454320 + FAM SINE Alu 20 140 -45 1669 185 3 13 chr20 38699802 38700110 -33453772 - AluJo SINE Alu -7 305 1 2046 138 7 0 chr20 38700138 38700435 -33453447 + AluSx SINE Alu 1 299 -13 790 231 6 0 chr20 38700446 38700606 -33453276 + FRAM SINE Alu 8 168 -8 6696 182 39 55 chr20 38700903 38701278 -33452604 + L1MB3 LINE L1 3634 4013 -2170 1295 213 4 4 chr20 38701278 38701517 -33452365 + MER8 DNA MER2_type 1 239 0 6696 182 39 55 chr20 38701517 38702493 -33451389 + L1MB3 LINE L1 4013 5003 -1180 1845 139 3 62 chr20 38702493 38702628 -33451254 + AluJb SINE Alu 1 142 -170 2351 113 0 0 chr20 38702628 38702937 -33450945 + AluSx SINE Alu 1 309 -3 1845 139 3 62 chr20 38702937 38703110 -33450772 + AluJb SINE Alu 142 291 -21 6696 182 39 55 chr20 38703110 38703797 -33450085 + L1MB3 LINE L1 5003 5630 -553 1722 181 0 30 chr20 38703797 38704101 -33449781 - AluJb SINE Alu -15 297 3 6696 182 39 55 chr20 38704101 38704629 -33449253 + L1MB3 LINE L1 5630 6165 -18 1723 183 3 7 chr20 38705071 38705241 -33448641 - AluJb SINE Alu -10 302 132 2306 84 14 7 chr20 38705241 38705538 -33448344 - AluY SINE Alu -12 299 1 1723 183 3 7 chr20 38705538 38705668 -33448214 - AluJb SINE Alu -180 132 3 2183 110 7 17 chr20 38705670 38705971 -33447911 - AluSx SINE Alu -13 299 2 1929 161 16 3 chr20 38705986 38706291 -33447591 - AluJo SINE Alu -2 310 2 1267 179 21 4 chr20 38706532 38706766 -33447116 + AluJb SINE Alu 73 310 -2 32 0 0 0 chr20 38706798 38706830 -33447052 + AT_rich Low_complexity Low_complexity 1 32 0 1754 146 30 27 chr20 38706849 38707177 -33446705 + L1MC1 LINE L1 6005 6333 0 24 0 0 0 chr20 38707565 38707589 -33446293 + AT_rich Low_complexity Low_complexity 1 24 0 223 282 273 0 chr20 38707622 38707732 -33446150 - L2 LINE L2 0 3272 3133 1973 124 42 0 chr20 38708338 38708621 -33445261 - AluSx SINE Alu -17 295 1 2668 58 0 0 chr20 38708672 38708980 -33444902 - AluY SINE Alu -3 308 1 1249 171 69 97 chr20 38709366 38709736 -33444146 + Tigger6 DNA MER2_type 1173 1552 -45 1996 115 3 40 chr20 38709736 38710040 -33443842 - AluSg SINE Alu -17 293 1 2262 119 3 0 chr20 38710044 38710347 -33443535 - AluSx SINE Alu -8 304 1 2229 111 0 0 chr20 38710357 38710654 -33443228 - AluSg1 SINE Alu -12 297 1 2445 89 0 0 chr20 38710654 38710958 -33442924 - AluSx SINE Alu -8 304 1 1249 171 69 97 chr20 38710958 38711004 -33442878 + Tigger6 DNA MER2_type 1562 1594 -3 2867 77 3 3 chr20 38711406 38711770 -33442112 + THE1B LTR MaLR 1 364 0 501 201 67 75 chr20 38711791 38711925 -33441957 - FLAM_A SINE Alu 0 133 1 29 47 0 0 chr20 38711971 38712014 -33441868 + AT_rich Low_complexity Low_complexity 1 43 0 2187 133 0 3 chr20 38712408 38712708 -33441174 - AluSx SINE Alu -13 299 1 382 162 67 38 chr20 38712865 38712970 -33440912 - MIR SINE MIR -83 179 72 2175 123 0 10 chr20 38713363 38713673 -33440209 - AluSx SINE Alu 0 312 6 4865 147 29 76 chr20 38713763 38713882 -33440000 + L1MB8 LINE L1 5083 5206 -972 330 95 0 0 chr20 38713882 38713924 -33439958 + AluY SINE Alu 1 42 -259 1799 84 0 4 chr20 38713925 38714151 -33439731 + AluY SINE Alu 80 304 -7 4865 147 29 76 chr20 38714151 38714684 -33439198 + L1MB8 LINE L1 5206 5762 -416 2004 118 14 27 chr20 38714684 38714981 -33438901 + AluJb SINE Alu 9 301 -11 4865 147 29 76 chr20 38714981 38715083 -33438799 + L1MB8 LINE L1 5762 5867 -311 1079 186 26 150 chr20 38715083 38715255 -33438627 + AluJo SINE Alu 2 113 -189 2089 103 3 41 chr20 38715255 38715575 -33438307 + AluSg1 SINE Alu 1 308 -1 1079 186 26 150 chr20 38715575 38715741 -33438141 + AluJo SINE Alu 113 298 -4 4865 147 29 76 chr20 38715741 38716087 -33437795 + L1MB8 LINE L1 5867 6169 -9 22 0 0 0 chr20 38716089 38716111 -33437771 + AT_rich Low_complexity Low_complexity 1 22 0 2374 88 3 3 chr20 38716387 38716694 -33437188 - AluSq SINE Alu -6 307 1 2219 99 0 0 chr20 38717127 38717461 -33436421 - AluY SINE Alu 0 334 1 834 125 8 23 chr20 38717527 38717655 -33436227 + FLAM_C SINE Alu 1 126 -17 856 208 0 0 chr20 38718459 38718608 -33435274 - FRAM SINE Alu -17 159 11 2104 132 0 16 chr20 38718665 38718968 -33434914 - AluSq SINE Alu -15 298 1 2132 142 0 0 chr20 38719753 38720064 -33433818 + AluSx SINE Alu 1 311 -1 573 308 135 58 chr20 38720237 38720838 -33433044 + HAL1 LINE L1 262 908 -1599 724 182 0 23 chr20 38720842 38720974 -33432908 + FLAM_A SINE Alu 5 133 0 2253 115 3 3 chr20 38720975 38721287 -33432595 + AluSx SINE Alu 1 312 0 28 61 0 0 chr20 38721774 38721823 -33432059 + AT_rich Low_complexity Low_complexity 1 49 0 2359 103 3 0 chr20 38721836 38722148 -33431734 + AluSp SINE Alu 1 313 0 1288 237 87 45 chr20 38722214 38722317 -33431565 + HAL1 LINE L1 1036 1133 -1374 2556 68 0 7 chr20 38722317 38722627 -33431255 + AluY SINE Alu 1 308 -3 1288 237 87 45 chr20 38722627 38723055 -33430827 + HAL1 LINE L1 1133 1589 -918 720 127 6 162 chr20 38723055 38723228 -33430654 - FAM SINE Alu 0 49 1 1954 133 17 10 chr20 38723235 38723536 -33430346 - AluSq SINE Alu -10 303 1 265 222 86 0 chr20 38723543 38723624 -33430258 + HAL1 LINE L1 1576 1663 -844 * 272 185 0 0 chr20 38723621 38723675 -33430207 + L1MDa LINE L1 2243 2296 -4244 1974 192 59 42 chr20 38723719 38724073 -33429809 + L1MDa LINE L1 2419 2766 -3774 2323 109 0 10 chr20 38724073 38724386 -33429496 - AluSg SINE Alu 0 310 1 2084 104 0 57 chr20 38724389 38724572 -33429310 - AluSx SINE Alu -14 298 139 2143 133 0 0 chr20 38724572 38724865 -33429017 - AluSx SINE Alu -19 293 1 2084 104 0 57 chr20 38724865 38724997 -33428885 - AluSx SINE Alu -173 139 1 1974 192 59 42 chr20 38724997 38725282 -33428600 + L1MDa LINE L1 2767 3077 -3463 2903 174 84 7 chr20 38725282 38725844 -33428038 + MER6A DNA MER2_type 1 605 0 1974 192 59 42 chr20 38725844 38725952 -33427930 + L1MDa LINE L1 3077 3182 -3358 231 240 144 58 chr20 38725976 38726080 -33427802 + L1MD2 LINE L1 6010 6122 -237 270 0 0 0 chr20 38726084 38726114 -33427768 + (CA)n Simple_repeat Simple_repeat 2 31 0 627 208 56 7 chr20 38726114 38726258 -33427624 + L1MD1 LINE L1 6081 6231 -11 2208 107 0 13 chr20 38726258 38726567 -33427315 + AluSg1 SINE Alu 1 305 -4 531 321 41 21 chr20 38726583 38726603 -33427279 + HAL1 LINE L1 1656 1674 -833 2265 109 0 0 chr20 38726603 38726897 -33426985 + AluSx SINE Alu 1 294 -18 531 321 41 21 chr20 38726897 38727119 -33426763 + HAL1 LINE L1 1674 1903 -604 198 0 0 0 chr20 38727365 38727387 -33426495 + (A)n Simple_repeat Simple_repeat 1 22 0 2027 116 45 0 chr20 38727822 38728114 -33425768 + AluSq SINE Alu 1 305 -8 2378 110 0 0 chr20 38728398 38728708 -33425174 - AluSg SINE Alu 0 310 1 21 0 0 0 chr20 38728813 38728834 -33425048 + AT_rich Low_complexity Low_complexity 1 21 0 3387 170 30 50 chr20 38728859 38729048 -33424834 - L1MB1 LINE L1 -206 5962 5771 543 69 0 0 chr20 38729048 38729120 -33424762 + (CCTA)n Simple_repeat Simple_repeat 4 75 0 3387 170 30 50 chr20 38729120 38729762 -33424120 - L1MB1 LINE L1 -397 5771 5150 927 136 8 0 chr20 38729764 38729896 -33423986 + AluSq/x SINE Alu 3 135 -178 2099 101 36 13 chr20 38729896 38730202 -33423680 + AluSp SINE Alu 1 313 0 2245 112 3 0 chr20 38730303 38730599 -33423283 + AluSc SINE Alu 13 309 0 816 191 0 0 chr20 38730619 38730760 -33423122 - FLAM_C SINE Alu -2 141 1 379 135 34 56 chr20 38730762 38730815 -33423067 - L1MB1 LINE L1 -1583 4563 4511 1564 165 114 7 chr20 38730815 38731088 -33422794 - AluJb SINE Alu -9 303 2 379 135 34 56 chr20 38731088 38731123 -33422759 - L1MB1 LINE L1 -1635 4511 4477 2427 67 3 0 chr20 38731946 38732269 -33421613 + AluSp SINE Alu 1 324 0 26 0 0 0 chr20 38732384 38732410 -33421472 + AT_rich Low_complexity Low_complexity 1 26 0 21 0 0 0 chr20 38732526 38732547 -33421335 + AT_rich Low_complexity Low_complexity 1 21 0 2028 130 13 7 chr20 38732558 38732858 -33421024 + AluJb SINE Alu 1 302 -10 356 234 103 19 chr20 38732861 38732968 -33420914 - FLAM_A SINE Alu -17 116 1 268 331 50 12 chr20 38733489 38733649 -33420233 - MIR SINE MIR -50 212 47 711 100 0 0 chr20 38734626 38734726 -33419156 + AluSc SINE Alu 206 305 -4 2436 35 0 85 chr20 38734728 38735046 -33418836 + AluY SINE Alu 1 291 -20 1487 155 136 8 chr20 38735138 38735396 -33418486 - AluSg SINE Alu -8 292 2 877 188 99 143 chr20 38735421 38735568 -33418314 + AluSx SINE Alu 1 153 -149 2293 107 0 7 chr20 38735568 38735866 -33418016 - AluSx SINE Alu -16 296 1 2080 149 3 3 chr20 38735868 38736177 -33417705 - AluJb SINE Alu -3 309 1 2217 113 3 10 chr20 38736181 38736492 -33417390 - AluSc SINE Alu 0 309 1 877 188 99 143 chr20 38736492 38736650 -33417232 + AluSx SINE Alu 157 300 -2 2189 96 0 58 chr20 38736667 38736980 -33416902 - AluSx SINE Alu -17 295 1 2068 154 0 3 chr20 38736982 38737287 -33416595 - AluJb SINE Alu -8 304 1 1684 141 116 11 chr20 38737691 38737968 -33415914 - AluJb SINE Alu -6 306 1 2200 118 10 3 chr20 38739541 38739846 -33414036 + AluSx SINE Alu 1 307 -5 1080 198 29 5 chr20 38740351 38740558 -33413324 + AluJb SINE Alu 89 300 -12 22 0 0 0 chr20 38740574 38740596 -33413286 + AT_rich Low_complexity Low_complexity 1 22 0 560 63 13 13 chr20 38740805 38740884 -33412998 + AluSp SINE Alu 59 137 -176 10004 31 10 182 chr20 38740887 38742548 -33411334 + SVA Other Other 13 1386 0 436 203 0 0 chr20 38742749 38742823 -33411059 - AluSg/x SINE Alu -43 266 193 2170 126 3 0 chr20 38742956 38743249 -33410633 - AluSx SINE Alu -18 294 1 2207 138 57 41 chr20 38743371 38743428 -33410454 + MSTB LTR MaLR 1 56 -370 1725 185 27 0 chr20 38743428 38743720 -33410162 + AluJb SINE Alu 1 300 -12 2207 138 57 41 chr20 38743720 38744081 -33409801 + MSTB LTR MaLR 56 426 0 1809 83 4 0 chr20 38744241 38744469 -33409413 + AluSp SINE Alu 1 229 -84 706 68 0 0 chr20 38744481 38744569 -33409313 + AluSp SINE Alu 208 295 -18 304 364 10 0 chr20 38744662 38744761 -33409121 + LTR67 LTR ERVL 119 218 -339 1120 183 0 33 chr20 38745017 38745230 -33408652 - AluJb SINE Alu -23 289 84 2126 159 0 0 chr20 38745471 38745780 -33408102 + AluJo SINE Alu 2 310 -2 664 213 0 8 chr20 38745795 38745917 -33407965 + FLAM_A SINE Alu 4 124 -9 2051 66 0 19 chr20 38745922 38746181 -33407701 + AluY SINE Alu 44 297 -14 1982 154 0 3 chr20 38746190 38746488 -33407394 + AluJo SINE Alu 6 302 -10 1104 173 133 4 chr20 38746506 38746732 -33407150 + L1MB7 LINE L1 5354 5608 -576 1070 128 0 13 chr20 38746733 38746883 -33406999 + AluSg/x SINE Alu 137 285 -22 3050 136 62 7 chr20 38746883 38747435 -33406447 + L1MB7 LINE L1 5594 6175 -9 2291 102 3 0 chr20 38747515 38747809 -33406073 - AluSx SINE Alu -17 295 1 477 220 71 14 chr20 38747810 38747951 -33405931 + L1MB2 LINE L1 5549 5697 -424 284 246 78 42 chr20 38748188 38748219 -33405663 - L1MC4a LINE L1 -1875 5933 5905 2123 210 48 24 chr20 38748219 38748756 -33405126 - MER44D DNA MER2_type 0 605 1 284 246 78 42 chr20 38748756 38748866 -33405016 - L1MC4a LINE L1 -1903 5905 5787 3146 174 91 50 chr20 38748889 38748991 -33404891 - L1MC4 LINE L1 0 8042 7946 2138 107 3 10 chr20 38748991 38749291 -33404591 - AluSg SINE Alu -12 298 1 3146 174 91 50 chr20 38749291 38749329 -33404553 - L1MC4 LINE L1 -96 7946 7911 1826 193 31 54 chr20 38749329 38749753 -33404129 + MLT2D LTR ERVL 1 414 0 3146 174 91 50 chr20 38749753 38750521 -33403361 - L1MC4 LINE L1 -131 7911 7095 522 242 39 39 chr20 38750536 38750689 -33403193 - L1MC4 LINE L1 -1069 6973 6821 * 847 164 6 18 chr20 38750680 38750845 -33403037 + L1MB2 LINE L1 5856 6018 -153 731 135 35 71 chr20 38750856 38750997 -33402885 - LTR24B LTR ERV1 -170 406 271 1507 155 18 36 chr20 38750998 38751276 -33402606 + AluJb SINE Alu 29 301 -11 363 169 46 0 chr20 38751455 38751520 -33402362 - MER31-int LTR ERV1 -239 4697 4630 1938 112 6 68 chr20 38751520 38751842 -33402040 - AluJo SINE Alu -10 302 1 1627 191 26 15 chr20 38751842 38752183 -33401699 - MER31-int LTR ERV1 -478 5853 5509 1718 161 7 4 chr20 38752201 38752480 -33401402 - AluSx SINE Alu -1 311 32 2162 128 0 0 chr20 38752517 38752813 -33401069 - AluSx SINE Alu -16 296 1 2009 143 25 6 chr20 38752815 38753137 -33400745 - MER31-int LTR ERV1 -813 5518 5191 767 138 11 76 chr20 38753360 38753410 -33400472 - MER31-int LTR ERV1 -1102 3834 3782 1503 153 6 86 chr20 38753410 38753737 -33400145 + AluJo SINE Alu 6 306 -6 767 138 11 76 chr20 38753737 38753844 -33400038 - MER31-int LTR ERV1 -1154 3782 3721 489 169 155 7 chr20 38754367 38754509 -33399373 + L1MB3 LINE L1 6007 6169 -14 204 97 0 0 chr20 38754523 38754554 -33399328 + (CA)n Simple_repeat Simple_repeat 1 31 0 1200 151 30 0 chr20 38754569 38754768 -33399114 - MER2 DNA MER2_type -1 344 140 1826 167 0 26 chr20 38754769 38755080 -33398802 + AluJb SINE Alu 1 303 -9 2028 152 0 3 chr20 38755240 38755549 -33398333 + AluSx SINE Alu 1 308 -4 1870 125 3 67 chr20 38755559 38755872 -33398010 + AluSg SINE Alu 1 293 -17 1470 204 31 3 chr20 38755967 38756256 -33397626 - AluJb SINE Alu -15 297 1 328 296 130 25 chr20 38756276 38756553 -33397329 + L1MC4a LINE L1 5628 5933 -1875 1392 160 13 0 chr20 38756558 38756783 -33397099 + AluJb SINE Alu 84 311 -1 2089 126 3 7 chr20 38756830 38757123 -33396759 - AluSq SINE Alu -21 292 1 2265 110 0 13 chr20 38757175 38757492 -33396390 - AluSq SINE Alu 0 313 1 702 118 67 8 chr20 38757571 38757690 -33396192 - L1MB3 LINE L1 -11 6172 6047 2266 90 27 13 chr20 38757704 38758005 -33395877 - AluY SINE Alu -6 305 1 831 83 0 18 chr20 38758008 38758117 -33395765 - AluSg/x SINE Alu -20 290 184 1678 101 186 4 chr20 38758361 38758619 -33395263 + AluSq SINE Alu 1 305 -8 484 274 44 22 chr20 38758874 38759100 -33394782 + L1MC4 LINE L1 7310 7540 -502 2256 98 3 0 chr20 38759115 38759402 -33394480 + AluSg SINE Alu 5 292 -18 1310 200 0 16 chr20 38759402 38759652 -33394230 + AluJo SINE Alu 45 290 -22 1390 222 39 66 chr20 38759674 38760039 -33393843 + L1MC4 LINE L1 7535 7825 -170 2392 96 3 3 chr20 38760039 38760352 -33393530 + AluSp SINE Alu 1 313 0 1390 222 39 66 chr20 38760352 38760519 -33393363 + L1MC4 LINE L1 7825 7995 0 1889 132 0 35 chr20 38760634 38760964 -33392918 + AluSx SINE Alu 8 327 0 340 250 139 15 chr20 38761231 38761400 -33392482 - MIR3 SINE MIR -40 168 3 1574 166 32 51 chr20 38761425 38761738 -33392144 + AluJo SINE Alu 1 307 -5 1552 160 32 102 chr20 38761766 38761842 -33392040 + MER7A DNA MER2_type 1 81 -2957 1715 151 58 4 chr20 38761842 38762120 -33391762 + AluSx SINE Alu 2 294 -18 1552 160 32 102 chr20 38762120 38762417 -33391465 + MER7A DNA MER2_type 81 346 0 1198 156 268 7 chr20 38762678 38762954 -33390928 - MER7A DNA MER2_type 0 346 1 2267 97 3 7 chr20 38763132 38763432 -33390450 + AluSx SINE Alu 1 299 -13 1644 187 13 3 chr20 38763443 38763742 -33390140 + AluJo SINE Alu 1 302 -10 1194 205 0 0 chr20 38764019 38764224 -33389658 + AluJo SINE Alu 3 207 -105 1749 127 28 99 chr20 38764394 38764716 -33389166 - AluJb SINE Alu -13 299 1 1003 110 0 0 chr20 38764721 38764848 -33389034 - FLAM_C SINE Alu -16 127 1 1593 200 11 4 chr20 38765416 38765696 -33388186 + AluJo SINE Alu 1 282 -30 2147 108 14 7 chr20 38765702 38765999 -33387883 - AluSq SINE Alu -14 299 1 206 329 47 12 chr20 38766116 38766201 -33387681 - L2 LINE L2 -287 2985 2898 2009 131 10 7 chr20 38766697 38766994 -33386888 - AluSx SINE Alu -14 298 1 287 272 14 25 chr20 38767303 38767423 -33386459 + MIR SINE MIR 25 147 -62 2934 136 75 51 chr20 38768708 38769258 -33384624 + MER51A LTR ERV1 1 563 -71 1654 169 0 25 chr20 38769259 38769537 -33384345 + AluSx SINE Alu 21 291 -21 2472 91 0 0 chr20 38769701 38770010 -33383872 + AluSc SINE Alu 1 309 0 225 0 0 0 chr20 38770438 38770463 -33383419 + (A)n Simple_repeat Simple_repeat 1 25 0 2252 105 0 20 chr20 38770506 38770812 -33383070 - AluSx SINE Alu -12 300 1 349 259 23 52 chr20 38770932 38771008 -33382874 + L1MC/D LINE L1 5318 5395 -2413 2131 85 3 20 chr20 38771008 38771326 -33382556 - AluSc SINE Alu 0 309 1 349 259 23 52 chr20 38771326 38771423 -33382459 + L1MC/D LINE L1 5395 5486 -2322 335 240 60 47 chr20 38771426 38771576 -33382306 + L2 LINE L2 2743 2894 -420 2347 96 0 10 chr20 38771741 38772043 -33381839 + AluSx SINE Alu 1 299 -13 2182 124 10 0 chr20 38772545 38772843 -33381039 - AluSg SINE Alu -9 301 1 1955 155 3 3 chr20 38772943 38773240 -33380642 + AluJb SINE Alu 1 297 -15 743 183 0 22 chr20 38773358 38773495 -33380387 + FLAM_C SINE Alu 2 135 -8 237 386 62 4 chr20 38773558 38773799 -33380083 - MIR SINE MIR -6 256 2 785 205 84 0 chr20 38774047 38774213 -33379669 + FRAM SINE Alu 1 176 0 2170 101 7 0 chr20 38774220 38774517 -33379365 - AluSx SINE Alu -13 299 1 26 50 0 0 chr20 38775219 38775259 -33378623 + AT_rich Low_complexity Low_complexity 1 40 0 2159 125 0 0 chr20 38775271 38775582 -33378300 - AluSx SINE Alu 0 312 2 609 263 99 48 chr20 38775592 38775870 -33378012 - L1ME4a LINE L1 -4 6117 5854 1578 179 0 24 chr20 38775870 38776190 -33377692 + AluJb SINE Alu 1 312 0 609 263 99 48 chr20 38776190 38776218 -33377664 - L1ME4a LINE L1 -267 5854 5829 2103 133 28 6 chr20 38776218 38776437 -33377445 - MER46B DNA MER2_type -2495 236 130 333 118 0 0 chr20 38776446 38776497 -33377385 + (TG)n Simple_repeat Simple_repeat 2 52 0 2000 88 39 14 chr20 38776497 38776770 -33377112 - AluSx SINE Alu -29 283 1 2103 133 28 6 chr20 38776770 38776903 -33376979 - MER46B DNA MER2_type -2601 130 1 609 263 99 48 chr20 38776903 38777070 -33376812 - L1ME4a LINE L1 -292 5829 5619 1389 75 38 0 chr20 38777070 38777256 -33376626 + AluSg SINE Alu 1 193 -117 1648 108 129 21 chr20 38777256 38777535 -33376347 - AluSg1 SINE Alu 0 309 1 374 294 61 29 chr20 38777589 38777902 -33375980 - L1ME4a LINE L1 -727 5443 5088 2030 123 3 19 chr20 38777909 38778226 -33375656 - AluSx SINE Alu 0 312 1 252 77 0 0 chr20 38778420 38778459 -33375423 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 1786 92 95 0 chr20 38778461 38778723 -33375159 - AluSx SINE Alu -25 287 1 1029 171 16 0 chr20 38778930 38779166 -33374716 - AluJ SINE Alu 0 358 120 2028 105 3 0 chr20 38779182 38779467 -33374415 + AluSx SINE Alu 1 286 -26 233 214 0 0 chr20 38779467 38779509 -33374373 + (CATA)n Simple_repeat Simple_repeat 3 44 0 836 133 0 0 chr20 38779509 38779629 -33374253 - AluJ SINE Alu -192 120 1 2279 97 0 0 chr20 38779872 38780181 -33373701 + AluSx SINE Alu 1 309 -3 1606 178 7 14 chr20 38780960 38781247 -33372635 + AluJo SINE Alu 1 285 -27 1990 115 0 14 chr20 38781309 38781445 -33372437 + AluSq SINE Alu 1 137 -180 2099 89 17 3 chr20 38781445 38781747 -33372135 + AluSq SINE Alu 1 306 -7 1990 115 0 14 chr20 38781747 38781931 -33371951 + AluSq SINE Alu 137 317 0 2376 60 0 7 chr20 38781938 38782238 -33371644 + AluY SINE Alu 1 298 -13 2123 101 0 16 chr20 38782856 38783163 -33370719 - AluSg SINE Alu -8 302 1 239 136 18 7 chr20 38783279 38783507 -33370375 + AluSx SINE Alu 1 298 -4 1996 136 0 0 chr20 38784541 38784836 -33369046 - AluSx SINE Alu -17 295 1 232 170 170 0 chr20 38785401 38785448 -33368434 + L1P4 LINE L1 5535 5589 -576 1915 124 18 0 chr20 38785585 38785867 -33368015 + AluSx SINE Alu 1 287 -25 258 32 0 0 chr20 38785879 38785910 -33367972 + (TCTG)n Simple_repeat Simple_repeat 2 32 0 * 327 78 0 0 chr20 38785909 38785960 -33367922 + (TATG)n Simple_repeat Simple_repeat 2 52 0 2197 89 0 0 chr20 38786353 38786635 -33367247 + AluSx SINE Alu 1 282 -30 506 342 77 4 chr20 38787503 38787763 -33366119 + L3 LINE CR1 1198 1476 -101 1869 143 35 48 chr20 38787764 38787939 -33365943 + THE1C LTR MaLR 1 177 -198 1957 138 0 22 chr20 38787939 38788075 -33365807 + AluSx SINE Alu 1 138 -174 2123 116 10 0 chr20 38788075 38788378 -33365504 + AluSp SINE Alu 1 306 -7 1957 138 0 22 chr20 38788378 38788560 -33365322 + AluSx SINE Alu 138 312 0 1869 143 35 48 chr20 38788560 38788756 -33365126 + THE1C LTR MaLR 177 367 -8 2053 124 13 0 chr20 38789029 38789328 -33364554 - AluSx SINE Alu -9 303 1 23 0 0 0 chr20 38789330 38789353 -33364529 + AT_rich Low_complexity Low_complexity 1 23 0 916 153 0 19 chr20 38789361 38789518 -33364364 + FRAM SINE Alu 13 166 -10 870 78 4 2 chr20 38789520 38789779 -33364103 + AluY SINE Alu 1 309 -2 1793 145 0 33 chr20 38789810 38790114 -33363768 + AluSx SINE Alu 9 302 -10 2217 96 3 7 chr20 38790440 38790743 -33363139 - AluSp SINE Alu -11 302 1 2179 105 0 0 chr20 38790747 38791043 -33362839 - AluSg SINE Alu -14 296 1 1794 183 0 0 chr20 38791242 38791729 -33362153 + AluJb SINE Alu 1 487 0 2222 90 10 6 chr20 38792116 38792427 -33361455 - AluSx SINE Alu 0 312 1 182 146 0 24 chr20 38793236 38793277 -33360605 + (TTC)n Simple_repeat Simple_repeat 2 41 0 2239 105 0 0 chr20 38793283 38793589 -33360293 - AluSx SINE Alu -6 306 1 229 0 0 0 chr20 38793596 38793622 -33360260 - HY1 scRNA scRNA -1 111 86 1489 194 0 44 chr20 38793827 38794014 -33359868 - AluJo SINE Alu -7 305 136 1678 163 32 0 chr20 38794014 38794296 -33359586 - AluJb SINE Alu -21 291 1 1489 194 0 44 chr20 38794296 38794427 -33359455 - AluJo SINE Alu -176 136 1 1266 146 5 5 chr20 38794501 38794720 -33359162 + AluJo SINE Alu 87 305 -7 571 224 60 51 chr20 38794720 38794896 -33358986 - MIR3 SINE MIR -26 182 1 2148 105 3 0 chr20 38794964 38795250 -33358632 - AluSx SINE Alu -25 287 1 2132 106 0 7 chr20 38795995 38796288 -33357594 + AluSx SINE Alu 1 291 -21 524 293 63 29 chr20 38796377 38796481 -33357401 + MER5A DNA MER1_type 9 123 -66 2350 84 0 0 chr20 38796481 38796792 -33357090 - AluY SINE Alu 0 311 1 524 293 63 29 chr20 38796792 38796861 -33357021 + MER5A DNA MER1_type 123 188 -1 1844 137 7 3 chr20 38796927 38797219 -33356663 + AluJb SINE Alu 1 293 -19 5827 64 17 84 chr20 38797238 38799198 -33354684 + SVA Other Other 1 1377 -9 2576 35 3 0 chr20 38799198 38799508 -33354374 + AluY SINE Alu 1 311 0 697 104 61 0 chr20 38799590 38799705 -33354177 + L1MC1 LINE L1 6211 6332 -1 368 205 86 73 chr20 38799801 38799952 -33353930 + MER58C DNA MER1_type 63 215 0 2105 101 20 0 chr20 38799969 38800265 -33353617 - AluSx SINE Alu -10 302 1 2305 81 3 0 chr20 38800265 38800562 -33353320 - AluSx SINE Alu -9 303 6 1479 69 0 25 chr20 38800693 38800895 -33352987 + MER107 DNA MER1_type 1 197 0 2009 123 3 19 chr20 38801456 38801489 -33352393 - AluSx SINE Alu 0 312 280 180 0 0 0 chr20 38801489 38801509 -33352373 + (TTA)n Simple_repeat Simple_repeat 2 21 0 2009 123 3 19 chr20 38801509 38801792 -33352090 - AluSx SINE Alu -32 280 1 1310 70 16 16 chr20 38801794 38801980 -33351902 - L1PA8 LINE L1 -8 6164 5979 277 279 90 123 chr20 38802005 38802179 -33351703 + L2 LINE L2 2783 2961 -311 1996 119 0 14 chr20 38802179 38802473 -33351409 - AluJo SINE Alu -22 290 1 277 279 90 123 chr20 38802473 38802775 -33351107 + L2 LINE L2 2961 3241 -31 251 163 0 47 chr20 38803076 38803119 -33350763 + AluJb SINE Alu 1 41 -259 1664 162 10 20 chr20 38803175 38803471 -33350411 + AluJb SINE Alu 20 312 0 295 214 100 63 chr20 38803889 38803999 -33349883 - MER5A DNA MER1_type 0 189 63 465 232 148 7 chr20 38804212 38804367 -33349515 + MLT1K LTR MaLR 412 588 0 1667 191 3 3 chr20 38804397 38804690 -33349192 - AluJb SINE Alu -19 293 1 181 233 100 17 chr20 38804705 38804765 -33349117 - MER5A DNA MER1_type -124 65 1 1797 125 66 3 chr20 38805156 38805445 -33348437 - AluSx SINE Alu -5 307 1 381 324 83 37 chr20 38805470 38805686 -33348196 + L2 LINE L2 2553 2778 -536 750 101 0 0 chr20 38805757 38805856 -33348026 + AluSc SINE Alu 1 99 -210 627 280 126 5 chr20 38805860 38806074 -33347808 - MLT1J LTR MaLR -227 284 45 545 223 13 7 chr20 38806094 38806263 -33347619 - L1MB7 LINE L1 -39 6127 5949 219 378 144 11 chr20 38806292 38806480 -33347402 + L2 LINE L2 3033 3245 -27 2495 146 61 5 chr20 38806533 38806957 -33346925 + MER83 LTR ERV1 1 448 0 864 44 106 0 chr20 38807006 38807119 -33346763 + AluYa5 SINE Alu 1 125 -186 1992 47 55 0 chr20 38807119 38807394 -33346488 + AluY SINE Alu 23 311 0 1550 172 28 14 chr20 38807543 38807833 -33346049 + AluJb SINE Alu 8 301 -11 1789 100 0 8 chr20 38807861 38808134 -33345748 - AluSx SINE Alu 0 307 37 688 179 26 8 chr20 38808238 38808355 -33345527 + AluJo SINE Alu 120 238 -74 841 184 0 7 chr20 38808390 38808531 -33345351 - FAM SINE Alu -45 140 1 807 245 61 66 chr20 38808968 38809143 -33344739 - L1MC4 LINE L1 -114 7928 7754 1923 148 0 7 chr20 38809143 38809447 -33344435 - AluSx SINE Alu -10 302 1 807 245 61 66 chr20 38809447 38809712 -33344170 - L1MC4 LINE L1 -288 7754 7490 1873 144 3 3 chr20 38810126 38810417 -33343465 - AluJo SINE Alu -21 291 1 314 286 94 41 chr20 38810438 38810609 -33343273 + L1ME4a LINE L1 5895 6074 -47 331 276 172 0 chr20 38810766 38810900 -33342982 + L2 LINE L2 2925 3081 -232 1709 157 7 3 chr20 38810910 38811242 -33342640 + AluSq SINE Alu 1 333 0 566 213 115 40 chr20 38811407 38811581 -33342301 + MLT1L LTR MaLR 429 615 0 1769 170 0 16 chr20 38811676 38811993 -33341889 - AluJo SINE Alu 0 312 1 364 259 37 0 chr20 38812087 38812195 -33341687 - HAL1 LINE L1 -110 2397 2286 1663 172 26 0 chr20 38812257 38812559 -33341323 - AluSx SINE Alu -2 310 1 2304 71 0 3 chr20 38812688 38812983 -33340899 - AluSc SINE Alu -15 294 1 299 242 31 102 chr20 38813441 38813514 -33340368 + L1ME LINE L1 5640 5702 -419 1411 200 35 7 chr20 38813514 38813804 -33340078 - AluJb SINE Alu -14 298 1 299 242 31 102 chr20 38813804 38813858 -33340024 + L1ME LINE L1 5702 5758 -363 1590 155 15 0 chr20 38813880 38814145 -33339737 - AluJb SINE Alu -43 269 1 1905 138 3 10 chr20 38814177 38814489 -33339393 + AluSx SINE Alu 1 310 -2 1993 105 6 48 chr20 38814501 38814852 -33339030 + AluSp SINE Alu 12 313 0 293 258 0 162 chr20 38815044 38815242 -33338640 - MIR SINE MIR -1 261 96 229 281 156 0 chr20 38815254 38815350 -33338532 + L2 LINE L2 3203 3313 0 548 216 33 33 chr20 38815617 38815770 -33338112 - L1ME LINE L1 -559 5607 5455 1331 165 37 44 chr20 38816122 38816352 -33337530 + AluSx SINE Alu 42 271 -41 2063 102 16 13 chr20 38816352 38816655 -33337227 - AluSp SINE Alu -9 304 1 1331 165 37 44 chr20 38816655 38816697 -33337185 + AluSx SINE Alu 271 312 0 340 281 184 0 chr20 38816995 38817109 -33336773 + L2 LINE L2 3177 3311 -2 452 222 0 22 chr20 38817236 38817326 -33336556 - Tigger3(Golem) DNA MER2_type -1 3028 2941 2103 113 0 7 chr20 38817327 38817627 -33336255 - AluSx SINE Alu -14 298 1 3274 111 24 2 chr20 38817628 38818122 -33335760 - Tigger3b DNA MER2_type -650 581 77 707 188 0 0 chr20 38818122 38818239 -33335643 + FLAM_C SINE Alu 1 117 -26 2261 90 7 0 chr20 38818247 38818548 -33335334 - AluSc SINE Alu -1 308 6 1918 106 0 68 chr20 38818582 38818916 -33334966 + AluSx SINE Alu 1 312 0 424 167 90 0 chr20 38818916 38818994 -33334888 - Tigger3b DNA MER2_type -1146 85 1 355 278 10 10 chr20 38818995 38819092 -33334790 + L3 LINE CR1 1477 1573 -4 243 359 23 0 chr20 38819101 38819229 -33334653 + L2 LINE L2 2877 3007 -265 1093 201 9 5 chr20 38819315 38819539 -33334343 - AluJb SINE Alu -87 225 1 232 269 13 13 chr20 38820165 38820243 -33333639 + L1ME LINE L1 5641 5718 -403 27 22 0 22 chr20 38820243 38820257 -33333625 + AT_rich Low_complexity Low_complexity 1 14 -30 1225 102 15 39 chr20 38820257 38820432 -33333450 - L1MA2 LINE L1 0 6304 6133 1886 133 32 0 chr20 38820432 38820717 -33333165 - AluSq SINE Alu -19 294 1 1225 102 15 39 chr20 38820717 38820746 -33333136 - L1MA2 LINE L1 -171 6133 6105 27 22 0 22 chr20 38820746 38820776 -33333106 + AT_rich Low_complexity Low_complexity 14 44 0 3359 93 14 6 chr20 38820776 38821261 -33332621 - L1MA2 LINE L1 -184 6120 5632 2020 130 0 13 chr20 38821403 38821693 -33332189 + AluSq SINE Alu 1 288 -25 255 93 0 0 chr20 38821693 38821736 -33332146 + (CATA)n Simple_repeat Simple_repeat 2 44 0 2020 130 0 13 chr20 38821736 38821752 -33332130 + AluSq SINE Alu 288 303 -10 23 0 0 29 chr20 38821911 38821926 -33331956 + AT_rich Low_complexity Low_complexity 1 15 -18 2178 108 0 13 chr20 38821926 38822241 -33331641 + AluSx SINE Alu 1 311 -1 23 0 0 29 chr20 38822241 38822259 -33331623 + AT_rich Low_complexity Low_complexity 15 33 0 6920 61 8 170 chr20 38822303 38823707 -33330175 + SVA Other Other 1 1176 -210 1023 269 157 19 chr20 38824049 38824567 -33329315 - L2 LINE L2 0 3313 2703 640 300 99 44 chr20 38824562 38824664 -33329218 - L2 LINE L2 -3 3310 3215 * 1849 155 3 3 chr20 38824664 38824961 -33328921 + AluJo SINE Alu 6 302 -10 640 300 99 44 chr20 38824961 38825353 -33328529 - L2 LINE L2 -98 3215 2796 222 300 0 0 chr20 38825401 38825471 -33328411 + A-rich Low_complexity Low_complexity 1 70 0 186 298 18 0 chr20 38825471 38825528 -33328354 - L2 LINE L2 -600 2714 2657 1137 107 6 0 chr20 38825575 38825734 -33328148 + AluSx SINE Alu 2 161 -151 2458 44 0 0 chr20 38825759 38826057 -33327825 - AluY SINE Alu -13 298 1 387 77 44 121 chr20 38826229 38826320 -33327562 + L1ME1 LINE L1 6081 6164 0 1614 163 33 0 chr20 38826354 38826475 -33327407 + AluJo SINE Alu 1 117 -195 207 0 0 0 chr20 38826475 38826498 -33327384 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1614 163 33 0 chr20 38826498 38826652 -33327230 + AluJo SINE Alu 117 285 -27 225 329 177 0 chr20 38826887 38827045 -33326837 - L2 LINE L2 -36 3236 3051 2236 93 7 0 chr20 38827454 38827754 -33326128 - AluSx SINE Alu -10 302 1 1747 133 30 23 chr20 38827904 38828204 -33325678 + AluJb SINE Alu 1 302 -10 200 213 0 0 chr20 38828523 38828570 -33325312 + A-rich Low_complexity Low_complexity 1 47 0 2135 110 3 13 chr20 38828726 38829034 -33324848 - AluSx SINE Alu -7 305 1 1772 142 31 0 chr20 38829105 38829275 -33324607 - AluSx SINE Alu -15 297 113 189 0 0 0 chr20 38829275 38829296 -33324586 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 1772 142 31 0 chr20 38829296 38829413 -33324469 - AluSx SINE Alu -199 113 1 916 193 0 0 chr20 38829468 38829629 -33324253 + FRAM SINE Alu 4 164 -2 308 258 26 123 chr20 38829666 38829821 -33324061 - MIR SINE MIR -109 153 14 655 255 201 20 chr20 38830375 38830673 -33323209 + L2 LINE L2 2928 3279 -34 413 222 33 11 chr20 38830811 38830901 -33322981 + MARNA DNA Mariner 267 358 -228 355 255 48 35 chr20 38831397 38831542 -33322340 + MER103 DNA DNA 20 166 0 2058 95 0 14 chr20 38831739 38832022 -33321860 + AluSx SINE Alu 1 279 -33 25 51 0 0 chr20 38832039 38832078 -33321804 + AT_rich Low_complexity Low_complexity 1 39 0 636 239 61 6 chr20 38832401 38832564 -33321318 + MIR SINE MIR 31 202 -60 488 224 67 22 chr20 38832788 38832922 -33320960 + MIR SINE MIR 13 152 -110 863 129 0 16 chr20 38832945 38833182 -33320700 + AluSx SINE Alu 2 298 -12 249 212 45 15 chr20 38833467 38833533 -33320349 + GA-rich Low_complexity Low_complexity 5 72 0 2358 80 0 0 chr20 38833761 38834060 -33319822 + AluSq SINE Alu 1 299 -14 228 197 28 70 chr20 38835134 38835205 -33318677 + LTR67 LTR ERVL 490 557 0 2364 93 0 0 chr20 38835246 38835558 -33318324 - AluSx SINE Alu 0 312 1 230 311 0 0 chr20 38835596 38835657 -33318225 - MIR SINE MIR -114 148 88 547 217 0 27 chr20 38836058 38836242 -33317640 + T-rich Low_complexity Low_complexity 1 179 0 * 702 216 8 8 chr20 38836202 38836469 -33317413 + CT-rich Low_complexity Low_complexity 1 267 0 964 175 6 6 chr20 38836470 38836636 -33317246 - FAM SINE Alu -9 166 1 23 33 0 0 chr20 38836665 38836695 -33317187 + AT_rich Low_complexity Low_complexity 1 30 0 3327 202 32 32 chr20 38836702 38837484 -33316398 - L1ME1 LINE L1 -14 6152 5371 1812 146 0 20 chr20 38837503 38837804 -33316078 + AluSx SINE Alu 16 310 -2 1199 198 0 4 chr20 38838435 38838673 -33315209 - AluJb SINE Alu 0 312 76 1946 117 20 7 chr20 38838676 38838976 -33314906 - AluSx SINE Alu 0 312 9 227 246 123 0 chr20 38839342 38839399 -33314483 - MIR SINE MIR -120 142 79 266 276 143 0 chr20 38839521 38839619 -33314263 + L2 LINE L2 3202 3313 0 557 329 38 14 chr20 38839674 38839887 -33313995 - MIR SINE MIR 0 262 45 2107 96 0 23 chr20 38840613 38840914 -33312968 + AluSx SINE Alu 1 294 -18 1631 128 80 31 chr20 38841050 38841369 -33312513 - AluJb SINE Alu 0 312 1 1966 98 91 0 chr20 38841374 38841660 -33312222 - AluSx SINE Alu 0 312 1 897 159 0 0 chr20 38841718 38841863 -33312019 - AluJb SINE Alu -16 296 152 698 130 0 0 chr20 38841863 38841963 -33311919 + AluSg/x SINE Alu 198 297 -13 2148 100 0 7 chr20 38842022 38842321 -33311561 - AluSg SINE Alu -13 297 1 325 218 168 20 chr20 38842633 38842734 -33311148 - L1ME3A LINE L1 -53 6117 6002 191 88 29 0 chr20 38842752 38842786 -33311096 + (TG)n Simple_repeat Simple_repeat 2 36 0 1304 236 28 20 chr20 38842853 38843209 -33310673 - L1ME1 LINE L1 -18 6148 5790 260 294 0 0 chr20 38843288 38843356 -33310526 + L2 LINE L2 3246 3313 0 2130 109 3 16 chr20 38843376 38843688 -33310194 + AluSx SINE Alu 1 308 -4 227 167 37 0 chr20 38843791 38843845 -33310037 + (TA)n Simple_repeat Simple_repeat 1 56 0 24 85 0 0 chr20 38843866 38843925 -33309957 + AT_rich Low_complexity Low_complexity 1 59 0 233 300 173 0 chr20 38844186 38844296 -33309586 + MIR3 SINE MIR 55 183 -25 629 262 148 16 chr20 38844319 38844502 -33309380 + MIR SINE MIR 5 211 -51 2150 109 0 7 chr20 38844555 38844858 -33309024 - AluSx SINE Alu -11 301 1 297 288 12 0 chr20 38845234 38845314 -33308568 + L2 LINE L2 3219 3299 -14 183 42 0 0 chr20 38845315 38845339 -33308543 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 572 301 99 46 chr20 38845344 38845689 -33308193 + L2 LINE L2 2900 3262 -51 508 261 140 26 chr20 38846244 38846508 -33307374 + L2 LINE L2 3020 3313 0 2082 108 3 3 chr20 38846542 38846837 -33307045 + AluSx SINE Alu 2 296 -16 755 211 45 72 chr20 38846884 38847107 -33306775 + L2 LINE L2 3095 3311 -2 1615 163 13 27 chr20 38847291 38847425 -33306457 + AluJo SINE Alu 1 135 -177 2212 86 0 25 chr20 38847425 38847740 -33306142 + AluY SINE Alu 1 307 -4 1615 163 13 27 chr20 38847740 38847906 -33305976 + AluJo SINE Alu 135 297 -15 2068 128 0 6 chr20 38847937 38848249 -33305633 - AluSx SINE Alu -2 310 1 744 197 31 105 chr20 38848357 38848419 -33305463 - L1ME1 LINE L1 -528 5638 5573 1354 196 35 7 chr20 38848419 38848704 -33305178 + AluJo SINE Alu 1 293 -19 2097 105 0 10 chr20 38848711 38849006 -33304876 + AluSx SINE Alu 10 301 -11 744 197 31 105 chr20 38849006 38849163 -33304719 - L1ME1 LINE L1 -599 5567 5428 853 160 29 34 chr20 38849171 38849346 -33304536 - AluJo SINE Alu -138 174 1 1339 183 149 0 chr20 38849346 38849668 -33304214 + MER63 DNA MER1_type 693 1062 0 226 178 0 0 chr20 38849668 38849713 -33304169 - L1ME1 LINE L1 -859 5307 5263 1117 180 0 38 chr20 38849717 38849928 -33303954 + MER3 DNA MER1_type 1 203 -6 309 152 22 0 chr20 38850025 38850071 -33303811 + MIR SINE MIR 14 60 -202 1619 134 7 28 chr20 38850098 38850389 -33303493 + AluJo SINE Alu 21 305 -7 202 296 0 56 chr20 38850389 38850460 -33303422 + MIR SINE MIR 194 260 -2 2165 92 7 0 chr20 38850620 38850924 -33302958 - AluSx SINE Alu -6 306 1 299 244 50 34 chr20 38851730 38851849 -33302033 + MIR SINE MIR 24 144 -118 583 268 53 57 chr20 38851882 38852110 -33301772 + MIR SINE MIR 22 248 -14 338 314 16 24 chr20 38852153 38852277 -33301605 - MIR SINE MIR -71 191 69 583 241 146 41 chr20 38852302 38852522 -33301360 + MIR SINE MIR 2 244 -18 1208 263 83 49 chr20 38852705 38853005 -33300877 + L2 LINE L2 2463 2751 -562 2435 54 0 0 chr20 38853005 38853300 -33300582 + AluSc SINE Alu 1 295 -14 1208 263 83 49 chr20 38853300 38853477 -33300405 + L2 LINE L2 2751 2920 -393 1782 128 47 3 chr20 38853477 38853775 -33300107 - AluSx SINE Alu -1 311 1 1208 263 83 49 chr20 38853775 38854106 -33299776 + L2 LINE L2 2920 3305 -8 2281 101 0 0 chr20 38854142 38854450 -33299432 - AluSx SINE Alu -4 308 1 1740 148 3 17 chr20 38854453 38854751 -33299131 - AluJb SINE Alu -18 294 1 578 244 47 0 chr20 38855004 38855131 -33298751 - L2 LINE L2 -1 3312 3180 769 231 119 45 chr20 38855222 38855276 -33298606 - MIR SINE MIR 0 262 213 1872 101 4 11 chr20 38855276 38855544 -33298338 - AluSq SINE Alu -17 296 31 769 231 119 45 chr20 38855544 38855732 -33298150 - MIR SINE MIR -49 213 2 199 260 265 22 chr20 38855745 38855926 -33297956 - L2 LINE L2 -221 3051 2827 266 259 62 18 chr20 38856047 38856159 -33297723 - L3 LINE CR1 -305 1272 1156 1953 127 0 3 chr20 38856567 38856858 -33297024 + AluSg SINE Alu 1 290 -20 1836 120 32 7 chr20 38857201 38857485 -33296397 - AluJb SINE Alu -13 299 9 1917 202 63 87 chr20 38857587 38857678 -33296204 - MLT1E2 LTR MaLR -4 622 530 1102 159 12 0 chr20 38857678 38857848 -33296034 - FAM SINE Alu -3 172 1 1917 202 63 87 chr20 38857848 38858403 -33295479 - MLT1E2 LTR MaLR -96 530 3 780 142 22 30 chr20 38858534 38858668 -33295214 - AluJo SINE Alu -178 134 2 1077 242 33 35 chr20 38858669 38859094 -33294788 - L1MC5 LINE L1 -303 7658 7235 440 202 11 9 chr20 38859144 38859277 -33294605 - L1MEc LINE L1 -3905 2345 2217 2652 10 0 0 chr20 38859277 38859577 -33294305 + AluYa5 SINE Alu 1 300 -11 460 246 154 16 chr20 38859582 38859666 -33294216 - L1MEc LINE L1 -4127 2269 2198 1987 120 0 16 chr20 38859666 38859999 -33293883 - AluSx SINE Alu 0 312 1 460 246 154 16 chr20 38859999 38860219 -33293663 - L1MEc LINE L1 -4198 2198 1923 1875 114 52 3 chr20 38860219 38860509 -33293373 - AluSc SINE Alu -5 304 1 317 231 106 19 chr20 38860527 38860631 -33293251 - L1MEc LINE L1 -6214 182 70 1639 159 10 26 chr20 38860677 38860979 -33292903 - AluJo SINE Alu -15 297 1 1720 156 7 3 chr20 38860992 38861281 -33292601 - AluSx SINE Alu -12 300 11 235 207 17 0 chr20 38861304 38861362 -33292520 - L1MC4a LINE L1 -869 6939 6881 429 20 0 0 chr20 38861368 38861418 -33292464 + (TG)n Simple_repeat Simple_repeat 1 50 0 512 234 78 0 chr20 38861419 38861547 -33292335 + MER58B DNA MER1_type 200 337 -4 335 367 27 7 chr20 38862423 38862573 -33291309 + MIR SINE MIR 17 169 -93 193 299 75 15 chr20 38862691 38862758 -33291124 + L2 LINE L2 3188 3258 -14 1924 124 7 7 chr20 38863251 38863541 -33290341 + AluSx SINE Alu 1 290 -22 1309 74 0 11 chr20 38863541 38863716 -33290166 + AluY SINE Alu 1 173 -138 1581 143 10 75 chr20 38863857 38864165 -33289717 + AluJo SINE Alu 2 289 -23 440 217 22 0 chr20 38864176 38864268 -33289614 + MIR SINE MIR 147 240 -22 343 271 0 0 chr20 38864340 38864410 -33289472 - L2 LINE L2 -2 3270 3201 433 344 28 42 chr20 38864590 38864878 -33289004 - L2 LINE L2 0 3313 3030 1784 159 3 7 chr20 38864901 38865203 -33288679 + AluJo SINE Alu 1 301 -11 500 198 12 0 chr20 38865252 38865338 -33288544 + L2 LINE L2 3203 3289 -24 272 283 166 5 chr20 38865343 38865676 -33288206 - L2 LINE L2 -235 3037 2655 439 307 260 18 chr20 38865689 38866312 -33287570 - L2 LINE L2 -830 2484 1711 234 0 0 0 chr20 38866312 38866338 -33287544 + (TTG)n Simple_repeat Simple_repeat 2 27 0 2132 83 0 0 chr20 38866342 38866618 -33287264 - AluSq SINE Alu -37 276 1 243 243 101 40 chr20 38866664 38866812 -33287070 - L2 LINE L2 -273 2999 2843 839 277 9 22 chr20 38867480 38867704 -33286178 + MIR SINE MIR 23 243 -19 1320 168 16 87 chr20 38868119 38868292 -33285590 - AluSx SINE Alu -4 298 157 2260 67 0 17 chr20 38868292 38868589 -33285293 - AluY SINE Alu -19 292 1 1320 168 16 87 chr20 38868589 38868736 -33285146 - AluSx SINE Alu -145 157 1 575 312 141 37 chr20 38869105 38869654 -33284228 - L2 LINE L2 -339 2975 2352 1652 149 44 0 chr20 38869654 38869949 -33283933 - AluJo SINE Alu -3 309 2 575 312 141 37 chr20 38869949 38870024 -33283858 - L2 LINE L2 -962 2352 2286 386 288 65 13 chr20 38870035 38870188 -33283694 + MIR SINE MIR 67 227 -35 331 242 15 129 chr20 38871346 38871478 -33282404 - L2 LINE L2 0 3272 3156 1100 149 14 54 chr20 38871894 38872054 -33281828 - AluJo SINE Alu -16 296 146 2085 100 21 0 chr20 38872054 38872345 -33281537 - AluSx SINE Alu -15 297 1 1100 149 14 54 chr20 38872345 38872406 -33281476 - AluJo SINE Alu -166 146 84 540 288 83 5 chr20 38873023 38873228 -33280654 + MIR SINE MIR 30 250 -12 892 168 18 36 chr20 38873338 38873505 -33280377 - FRAM SINE Alu -12 164 1 379 308 110 7 chr20 38873624 38873770 -33280112 + MIR SINE MIR 20 180 -82 1882 174 25 6 chr20 38874758 38874982 -33278900 + L1MB5 LINE L1 5799 6034 -140 1868 164 3 0 chr20 38874982 38875281 -33278601 - AluJb SINE Alu -12 300 1 1882 174 25 6 chr20 38875281 38875417 -33278465 + L1MB5 LINE L1 6034 6166 -8 1656 136 100 4 chr20 38875418 38875698 -33278184 - AluJb SINE Alu -5 307 1 589 315 73 5 chr20 38878477 38878696 -33275186 + MIR SINE MIR 28 261 -1 2021 119 0 7 chr20 38878774 38879067 -33274815 - AluSx SINE Alu -21 291 1 1686 153 78 0 chr20 38879732 38880014 -33273868 - AluSg SINE Alu -6 304 1 2232 98 0 0 chr20 38880046 38880343 -33273539 + AluSc SINE Alu 1 297 -12 518 130 0 0 chr20 38880456 38880548 -33273334 - AluJ/FRAM SINE Alu -2 310 219 611 286 104 9 chr20 38881082 38881313 -33272569 + MIR SINE MIR 8 260 -2 830 144 0 34 chr20 38881369 38881515 -33272367 - AluJo SINE Alu -171 141 1 1479 160 26 64 chr20 38881526 38881839 -33272043 - AluJo SINE Alu -11 301 1 472 155 99 68 chr20 38882475 38882585 -33271297 - L1ME4a LINE L1 -1 6120 6002 2209 99 0 3 chr20 38882585 38882888 -33270994 - AluSq SINE Alu -11 302 1 472 155 99 68 chr20 38882888 38882938 -33270944 - L1ME4a LINE L1 -119 6002 5955 766 162 8 0 chr20 38882964 38883081 -33270801 + AluJo/FLAM SINE Alu 2 119 -193 2166 98 0 0 chr20 38883083 38883391 -33270491 - AluSx SINE Alu 0 308 1 2072 104 0 13 chr20 38883412 38883719 -33270163 + AluSx SINE Alu 1 303 -9 1588 113 90 23 chr20 38883788 38884054 -33269828 - AluSq SINE Alu -12 301 18 470 141 14 0 chr20 38884054 38884125 -33269757 - AluS SINE Alu -240 73 2 935 145 0 0 chr20 38884208 38884353 -33269529 + AluJb SINE Alu 156 300 -12 688 200 24 0 chr20 38884364 38884489 -33269393 + FLAM_A SINE Alu 1 128 -5 1858 119 21 11 chr20 38884542 38884828 -33269054 - AluSq SINE Alu -15 298 10 25 0 0 0 chr20 38885048 38885073 -33268809 + AT_rich Low_complexity Low_complexity 1 25 0 342 338 29 7 chr20 38885073 38885212 -33268670 - L1ME4a LINE L1 -14 6107 5966 1232 191 139 8 chr20 38885397 38885664 -33268218 + AluJo SINE Alu 1 302 0 2090 174 118 79 chr20 38886611 38887266 -33266616 - L1MC4a LINE L1 -272 7536 6857 183 80 0 0 chr20 38887580 38887605 -33266277 + (TTTTC)n Simple_repeat Simple_repeat 4 28 0 459 235 136 63 chr20 38887784 38888113 -33265769 - L1ME4a LINE L1 -747 5399 5095 2248 101 0 0 chr20 38888113 38888419 -33265463 + AluSx SINE Alu 1 306 -6 459 235 136 63 chr20 38888419 38888506 -33265376 - L1ME4a LINE L1 -1051 5095 5051 1987 151 0 0 chr20 38888506 38888818 -33265064 - AluSx SINE Alu 0 312 1 459 235 136 63 chr20 38888818 38888898 -33264984 - L1ME4a LINE L1 -1095 5051 4978 1960 148 0 3 chr20 38888975 38889280 -33264602 - AluJb SINE Alu 0 312 9 2309 76 0 0 chr20 38889329 38889647 -33264235 - AluSc SINE Alu 0 318 1 2113 92 6 32 chr20 38889779 38890094 -33263788 - AluSx SINE Alu -5 307 1 373 149 0 0 chr20 38890120 38890187 -33263695 - L1MB7 LINE L1 -7 6177 6111 1761 136 11 14 chr20 38890203 38890482 -33263400 + AluJo SINE Alu 18 295 -17 913 106 0 0 chr20 38890484 38890607 -33263275 + AluSq/x SINE Alu 3 125 -187 4143 181 36 43 chr20 38890624 38892015 -33261867 - L1MB7 LINE L1 -58 6126 4750 285 51 0 0 chr20 38892229 38892268 -33261614 + (TG)n Simple_repeat Simple_repeat 1 39 0 2121 118 0 7 chr20 38893249 38893554 -33260328 - AluSx SINE Alu -9 303 1 251 262 0 0 chr20 38893561 38893645 -33260237 - L1MC/D LINE L1 -1988 5820 5737 1565 207 126 3 chr20 38894985 38895342 -33258540 - MLT1I LTR MaLR -6 403 3 680 295 124 4 chr20 38895344 38895578 -33258304 + MIR SINE MIR 1 262 0 225 154 0 0 chr20 38895666 38895705 -33258177 + T-rich Low_complexity Low_complexity 1 39 0 639 256 6 30 chr20 38896523 38896691 -33257191 - MER117 DNA MER1_type -2 195 32 1849 114 8 0 chr20 38898149 38898411 -33255471 - AluSx SINE Alu -31 281 18 802 124 9 0 chr20 38898461 38898574 -33255308 + AluJb SINE Alu 2 115 -197 343 320 97 24 chr20 38899894 38900143 -33253739 - MIR SINE MIR -2 260 3 246 320 78 16 chr20 38900898 38901026 -33252856 + L2 LINE L2 3136 3271 -1 190 315 128 20 chr20 38902208 38902357 -33251525 - MIR SINE MIR -61 201 37 352 260 55 40 chr20 38903167 38903377 -33250505 - MIR3 SINE MIR -55 153 3 1385 179 67 14 chr20 38903504 38903789 -33250093 + AluJo SINE Alu 1 300 -12 398 263 45 0 chr20 38904841 38904974 -33248908 + L1MC4a LINE L1 5784 5922 -1886 1511 140 65 51 chr20 38904989 38905282 -33248600 + AluJo SINE Alu 1 297 -15 1806 156 10 7 chr20 38906728 38907036 -33246846 - AluJo SINE Alu -3 309 1 243 229 148 83 chr20 38907395 38907594 -33246288 - MIR SINE MIR -52 210 3 2090 116 3 7 chr20 38907696 38908006 -33245876 - AluSx SINE Alu -3 309 1 1595 170 32 0 chr20 38908166 38908443 -33245439 - AluJo SINE Alu -26 286 1 927 79 8 16 chr20 38909976 38910103 -33243779 + AluJo SINE Alu 11 136 -176 1220 173 27 9 chr20 38911189 38911409 -33242473 - MER58A DNA MER1_type 0 224 1 315 0 0 0 chr20 38911630 38911665 -33242217 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 658 242 32 16 chr20 38911670 38911856 -33242026 - L1ME1 LINE L1 -4 6162 5974 807 139 0 0 chr20 38911990 38912105 -33241777 - FLAM_C SINE Alu -18 125 11 1928 97 40 27 chr20 38914110 38914410 -33239472 + AluSx SINE Alu 1 304 -8 262 151 38 0 chr20 38914418 38914471 -33239411 - MSTC LTR MaLR -373 55 1 519 264 103 23 chr20 38914573 38914747 -33239135 + MIR SINE MIR 3 190 -72 320 94 0 38 chr20 38914808 38914861 -33239021 + MADE1 DNA Mariner 30 80 0 633 264 48 39 chr20 38915163 38915371 -33238511 + Charlie8 DNA MER1_type 58 267 -2150 370 251 186 64 chr20 38915919 38916246 -33237636 - L2 LINE L2 -33 3239 2873 704 148 74 0 chr20 38916357 38916465 -33237417 - FLAM_A SINE Alu -17 116 1 1870 153 16 0 chr20 38916539 38916846 -33237036 - AluJb SINE Alu 0 312 1 461 236 190 11 chr20 38917056 38917230 -33236652 + MIR SINE MIR 31 235 -27 204 235 78 0 chr20 38917196 38917247 -33236635 + L2 LINE L2 3206 3260 -12 * 2069 116 0 3 chr20 38918395 38918696 -33235186 - AluSx SINE Alu -12 300 1 710 194 14 0 chr20 38918761 38918900 -33234982 - L1ME3 LINE L1 -1 6161 6021 2297 198 99 78 chr20 38919020 38919075 -33234807 + L2 LINE L2 1744 1796 -1518 1314 136 43 116 chr20 38919075 38919309 -33234573 - MER33 DNA MER1_type -2261 324 121 1754 152 3 23 chr20 38919309 38919618 -33234264 - AluJo SINE Alu -5 307 5 1314 136 43 116 chr20 38919618 38919728 -33234154 - MER33 DNA MER1_type -2464 121 5 2297 198 99 78 chr20 38919728 38920028 -33233854 + L2 LINE L2 1796 2088 -1226 2235 89 7 7 chr20 38920028 38920330 -33233552 - AluSx SINE Alu -10 302 1 2297 198 99 78 chr20 38920330 38920772 -33233110 + L2 LINE L2 2088 2559 -755 376 218 69 0 chr20 38920772 38920873 -33233009 + L2 LINE L2 2689 2796 -518 1391 154 189 84 chr20 38920873 38921066 -33232816 + LTR54B LTR ERV1 1 172 -326 2309 94 0 0 chr20 38921066 38921373 -33232509 + AluSx SINE Alu 1 307 -5 1391 154 189 84 chr20 38921373 38921607 -33232275 + LTR54B LTR ERV1 172 473 -25 2032 104 0 10 chr20 38921607 38921922 -33231960 + AluSx SINE Alu 1 312 0 1273 251 104 38 chr20 38921976 38922447 -33231435 + L2 LINE L2 2807 3308 -5 2204 101 3 0 chr20 38922447 38922745 -33231137 + AluSp SINE Alu 1 299 -14 612 288 88 13 chr20 38922830 38923056 -33230826 + MIR SINE MIR 14 256 -6 186 313 96 12 chr20 38923674 38923757 -33230125 + L2 LINE L2 3197 3286 -27 1469 132 0 5 chr20 38924541 38924754 -33229128 + AluSq SINE Alu 1 212 -101 389 107 0 0 chr20 38924754 38924810 -33229072 + AluSq/x SINE Alu 78 133 -170 2151 110 24 0 chr20 38924813 38925104 -33228778 + AluSq SINE Alu 1 298 -15 186 292 0 0 chr20 38925464 38925512 -33228370 - MER5A DNA MER1_type -22 167 120 204 40 0 0 chr20 38925656 38925681 -33228201 + (ATTG)n Simple_repeat Simple_repeat 4 28 0 681 170 0 0 chr20 38925681 38925793 -33228089 - FLAM_C SINE Alu -19 114 3 2219 127 7 0 chr20 38925805 38926105 -33227777 - AluSx SINE Alu -10 302 1 2398 165 92 103 chr20 38926561 38927348 -33226534 + L1MC4 LINE L1 7265 8042 0 226 259 281 0 chr20 38927353 38927434 -33226448 + MIR SINE MIR 20 77 -185 2581 58 0 7 chr20 38927434 38927743 -33226139 + AluY SINE Alu 1 307 -4 226 259 281 0 chr20 38927743 38927796 -33226086 + MIR SINE MIR 77 192 -70 1841 184 13 0 chr20 38927804 38928103 -33225779 + AluJo SINE Alu 1 303 -9 184 294 29 15 chr20 38928111 38928179 -33225703 - MIR SINE MIR 0 262 194 227 229 244 61 chr20 38929094 38929225 -33224657 + MIR SINE MIR 20 174 -88 2171 122 3 0 chr20 38929292 38929588 -33224294 + AluSx SINE Alu 4 300 -12 515 267 24 18 chr20 38929717 38929882 -33224000 + MIR SINE MIR 31 196 -66 260 230 65 115 chr20 38930644 38930795 -33223087 - L3 LINE CR1 -31 1546 1408 1959 176 0 0 chr20 38930795 38931096 -33222786 - AluJo SINE Alu -11 301 1 260 230 65 115 chr20 38931096 38931161 -33222721 - L3 LINE CR1 -169 1408 1341 249 304 43 26 chr20 38931781 38931896 -33221986 - MIR SINE MIR -63 145 29 1192 153 0 93 chr20 38932421 38932657 -33221225 + AluJb SINE Alu 85 298 -14 1806 183 0 19 chr20 38934146 38934458 -33219424 + AluSx SINE Alu 1 306 -6 251 279 38 82 chr20 38934926 38935030 -33218852 + MIR3 SINE MIR 9 105 -103 2555 71 0 0 chr20 38935030 38935326 -33218556 + AluSg SINE Alu 1 296 -14 251 279 38 82 chr20 38935326 38935379 -33218503 + MIR3 SINE MIR 105 159 -49 2056 142 3 0 chr20 38935397 38935685 -33218197 - AluSx SINE Alu -23 289 1 2072 141 0 3 chr20 38936031 38936335 -33217547 + AluSx SINE Alu 1 303 -9 2377 98 0 3 chr20 38936337 38936665 -33217217 + AluY SINE Alu 5 331 0 1187 171 42 5 chr20 38936693 38936910 -33216972 - AluJo SINE Alu 0 312 88 22 0 0 0 chr20 38936918 38936940 -33216942 + AT_rich Low_complexity Low_complexity 1 22 0 257 239 104 23 chr20 38937182 38937312 -33216570 + MIR SINE MIR 103 245 -17 282 252 63 40 chr20 38937320 38937446 -33216436 - MIR SINE MIR -73 135 35 967 131 0 21 chr20 38937450 38937595 -33216287 + FRAM SINE Alu 26 167 -9 27 0 0 0 chr20 38937654 38937681 -33216201 + AT_rich Low_complexity Low_complexity 1 27 0 2341 101 0 7 chr20 38937696 38938004 -33215878 + AluSx SINE Alu 1 306 -6 2075 203 53 73 chr20 38938005 38938469 -33215413 - L1ME1 LINE L1 -18 6148 5699 1683 161 17 37 chr20 38938469 38938767 -33215115 - AluJo SINE Alu -17 295 4 2075 203 53 73 chr20 38938767 38938943 -33214939 - L1ME1 LINE L1 -467 5699 5521 465 254 30 43 chr20 38939327 38939504 -33214378 + MIR SINE MIR 15 188 -61 908 135 14 7 chr20 38939513 38939654 -33214228 + FLAM_C SINE Alu 1 142 -1 375 206 10 69 chr20 38940490 38940592 -33213290 + MIR SINE MIR 77 172 -90 2403 93 3 0 chr20 38940771 38941073 -33212809 - AluSp SINE Alu -9 304 2 2334 102 7 0 chr20 38941078 38941372 -33212510 - AluSx SINE Alu -16 296 1 530 197 0 0 chr20 38941712 38941816 -33212066 + MER5A DNA MER1_type 6 109 -80 2129 148 0 0 chr20 38942218 38942516 -33211366 + AluSx SINE Alu 1 298 -14 363 367 24 6 chr20 38943225 38943394 -33210488 - MIR SINE MIR -59 203 32 215 286 68 116 chr20 38943921 38944155 -33209727 - L2 LINE L2 -12 3260 3016 2085 104 7 30 chr20 38944155 38944452 -33209430 - AluSx SINE Alu -22 290 1 1857 169 3 0 chr20 38944454 38944744 -33209138 - AluJb SINE Alu -21 291 1 215 286 68 116 chr20 38944744 38944800 -33209082 - L2 LINE L2 -257 3015 2981 267 318 40 16 chr20 38944864 38944990 -33208892 - MER5A DNA MER1_type -54 135 7 2534 90 3 0 chr20 38945582 38945894 -33207988 - AluSp SINE Alu 0 313 1 580 168 28 0 chr20 38945980 38946087 -33207795 + FLAM_C SINE Alu 2 111 -32 336 102 0 0 chr20 38946114 38946163 -33207719 + (GGGGA)n Simple_repeat Simple_repeat 5 53 0 479 262 24 25 chr20 38946215 38946365 -33207517 - MIR SINE MIR -49 159 11 2210 117 7 0 chr20 38946467 38946767 -33207115 + AluSx SINE Alu 1 302 -10 567 152 6 70 chr20 38946819 38946977 -33206905 - L1MC5 LINE L1 -168 7793 7646 362 295 108 49 chr20 38947505 38947532 -33206350 + MIR3 SINE MIR 32 56 -171 1577 126 28 126 chr20 38947532 38947662 -33206220 + AluSx SINE Alu 1 142 -170 2355 85 0 3 chr20 38947662 38947955 -33205927 + AluSx SINE Alu 10 301 -11 1577 126 28 126 chr20 38947955 38948149 -33205733 + AluSx SINE Alu 142 293 -19 362 295 108 49 chr20 38948149 38948315 -33205567 + MIR3 SINE MIR 56 224 -3 2373 95 3 3 chr20 38948387 38948693 -33205189 + AluSx SINE Alu 1 306 -6 331 301 127 12 chr20 38949292 38949465 -33204417 + L2 LINE L2 2866 3058 -214 317 290 0 0 chr20 38949617 38949686 -33204196 - L1MD3 LINE L1 0 7995 7927 1840 143 14 17 chr20 38949694 38949988 -33203894 + AluJo SINE Alu 1 293 -19 196 138 35 0 chr20 38949996 38950022 -33203860 + (TTAAA)n Simple_repeat Simple_repeat 3 27 -35 1602 173 6 77 chr20 38950022 38950207 -33203675 - AluJb SINE Alu -11 301 147 2485 68 0 0 chr20 38950207 38950500 -33203382 - AluY SINE Alu -17 294 2 1602 173 6 77 chr20 38950500 38950638 -33203244 - AluJb SINE Alu -165 147 1 196 138 35 0 chr20 38950638 38950669 -33203213 + (TTAAA)n Simple_repeat Simple_repeat 27 62 0 251 145 18 253 chr20 38950682 38950711 -33203171 - L1MC4 LINE L1 -32 8010 7976 2096 137 0 7 chr20 38950711 38951018 -33202864 + AluJb SINE Alu 1 305 -7 251 145 18 253 chr20 38951018 38951209 -33202673 - L1MC4 LINE L1 -66 7976 7842 347 306 65 0 chr20 38951261 38951385 -33202497 + L2 LINE L2 3134 3265 -7 2324 117 0 0 chr20 38951629 38951936 -33201946 - AluSq SINE Alu -6 307 1 712 216 78 6 chr20 38952302 38952469 -33201413 + MER5A DNA MER1_type 1 179 -10 2084 122 23 0 chr20 38952953 38953256 -33200626 - AluSq SINE Alu -1 312 3 398 262 79 61 chr20 38953502 38953629 -33200253 - L1MC4a LINE L1 -1860 5948 5814 1896 132 46 26 chr20 38953629 38953933 -33199949 - AluSx SINE Alu -2 310 1 398 262 79 61 chr20 38953933 38954034 -33199848 - L1MC4a LINE L1 -1994 5814 5716 192 328 15 0 chr20 38954039 38954106 -33199776 - MIR SINE MIR -62 146 79 476 255 35 76 chr20 38954305 38954450 -33199432 + L2 LINE L2 3134 3272 0 331 369 134 0 chr20 38954469 38954656 -33199226 + MIR SINE MIR 14 225 -37 208 170 43 0 chr20 38954747 38954794 -33199088 - L2 LINE L2 -229 3043 2995 216 338 38 68 chr20 38955262 38955395 -33198487 + L2 LINE L2 3026 3154 -118 215 244 0 0 chr20 38955422 38955463 -33198419 + L2 LINE L2 3268 3308 -5 2284 121 3 0 chr20 38956468 38956774 -33197108 - AluSg SINE Alu -3 307 1 293 73 0 0 chr20 38956851 38956892 -33196990 + MADE1 DNA Mariner 1 41 -39 269 261 14 0 chr20 38957022 38957091 -33196791 - MLT1G LTR MaLR -305 285 216 238 222 0 0 chr20 38957117 38957171 -33196711 - MLT1F1 LTR MaLR -403 192 139 1971 165 0 13 chr20 38957268 38957619 -33196263 + AluJb SINE Alu 1 347 0 186 43 0 0 chr20 38957614 38957637 -33196245 + (GGGA)n Simple_repeat Simple_repeat 4 26 0 188 392 8 17 chr20 38957638 38957758 -33196124 - L2 LINE L2 -237 3035 2917 374 279 188 7 chr20 38957962 38958116 -33195766 + MIR SINE MIR 81 262 0 2207 163 40 71 chr20 38958453 38958752 -33195130 - MLT1C LTR MaLR 0 467 187 936 168 0 0 chr20 38958752 38958907 -33194975 - FRAM SINE Alu -8 158 4 2207 163 40 71 chr20 38958907 38959087 -33194795 - MLT1C LTR MaLR -280 187 3 2017 153 0 10 chr20 38959284 38959579 -33194303 - AluSx SINE Alu -12 300 9 292 336 86 0 chr20 38959759 38959875 -33194007 + L2 LINE L2 3147 3272 0 2213 223 50 0 chr20 38960045 38960561 -33193321 - MLT1F LTR MaLR 0 542 1 560 225 39 8 chr20 38960680 38960809 -33193073 + L2 LINE L2 3136 3268 -4 2642 58 0 3 chr20 38961140 38961449 -33192433 - AluSx SINE Alu -4 308 1 282 195 232 49 chr20 38962051 38962215 -33191667 + MIR SINE MIR 21 214 -48 2284 104 6 22 chr20 38962498 38962815 -33191067 - AluSx SINE Alu 0 312 1 585 202 0 8 chr20 38962847 38962966 -33190916 - FLAM_C SINE Alu -15 118 1 4277 146 142 88 chr20 38963237 38963662 -33190220 - L1MC3 LINE L1 -8 7777 7377 2349 135 3 3 chr20 38963662 38964026 -33189856 + THE1B LTR MaLR 1 364 0 4277 146 142 88 chr20 38964026 38964192 -33189690 - L1MC3 LINE L1 -408 7377 7222 241 257 27 0 chr20 38964192 38964266 -33189616 - MLT1F1 LTR MaLR -456 111 36 4277 146 142 88 chr20 38964266 38964363 -33189519 - L1MC3 LINE L1 -563 7222 7132 2065 108 7 46 chr20 38964363 38964670 -33189212 - AluSx SINE Alu -17 295 1 4277 146 142 88 chr20 38964670 38964808 -33189074 - L1MC3 LINE L1 -653 7132 7003 195 42 0 0 chr20 38964808 38964832 -33189050 + (TTTTG)n Simple_repeat Simple_repeat 4 27 0 4277 146 142 88 chr20 38964832 38965138 -33188744 - L1MC3 LINE L1 -782 7003 6503 4052 79 6 2 chr20 38965139 38965660 -33188222 - MER1A DNA MER1_type -2 527 5 1870 145 36 6 chr20 38965664 38966001 -33187881 - L1MC3 LINE L1 -1274 6511 6165 695 175 0 0 chr20 38966022 38966136 -33187746 - FLAM_C SINE Alu -22 121 8 525 176 16 24 chr20 38966143 38966268 -33187614 - L1MC3 LINE L1 -1619 6166 6043 1077 235 165 9 chr20 38966310 38966940 -33186942 + L2 LINE L2 2503 3313 0 649 229 17 72 chr20 38967400 38967636 -33186246 + MER112 DNA MER1_type 33 255 -5 499 277 99 20 chr20 38967636 38967838 -33186044 + MIR SINE MIR 10 227 -35 885 168 103 0 chr20 38968115 38968300 -33185582 - MER3 DNA MER1_type 0 209 6 643 303 4 13 chr20 38968609 38968837 -33185045 - L1ME LINE L1 -334 5787 5562 895 314 73 30 chr20 38969204 38969644 -33184238 + MARNA DNA Mariner 110 568 -18 2476 68 0 7 chr20 38969703 38969997 -33183885 - AluSq SINE Alu -17 296 5 328 203 38 0 chr20 38970029 38970108 -33183774 - Charlie5 DNA MER1_type -27 2585 2504 887 156 0 35 chr20 38970115 38970276 -33183606 + FRAM SINE Alu 20 176 0 2774 103 55 30 chr20 38970290 38970796 -33183086 - L1MB4 LINE L1 -6 6174 5656 1604 163 37 50 chr20 38970798 38971098 -33182784 - AluJb SINE Alu -16 296 1 1897 127 11 4 chr20 38971159 38971427 -33182455 - AluJo SINE Alu -34 278 9 838 176 59 14 chr20 38971428 38971636 -33182246 - MER33 DNA MER1_type -250 74 1 385 358 18 22 chr20 38971782 38972008 -33181874 - L2 LINE L2 -220 3052 2828 659 224 260 22 chr20 38972030 38972645 -33181237 + L2 LINE L2 2549 3311 -2 251 269 34 17 chr20 38972758 38972877 -33181005 - L1MC4 LINE L1 -2 8040 7920 2068 113 25 0 chr20 38972917 38973192 -33180690 + AluSx SINE Alu 1 282 -30 1021 129 45 0 chr20 38973037 38973192 -33180690 + AluSg/x SINE Alu 119 310 0 271 0 0 0 chr20 38973192 38973222 -33180660 + (TAAA)n Simple_repeat Simple_repeat 4 108 0 396 316 122 60 chr20 38973646 38974080 -33179802 - L2 LINE L2 0 3272 2812 541 295 38 16 chr20 38974201 38974521 -33179361 - L1MC5 LINE L1 -393 7415 7247 1210 253 83 69 chr20 38974528 38974970 -33178912 - L1MC4 LINE L1 -727 7234 6800 1778 168 10 0 chr20 38974970 38975267 -33178615 - AluJb SINE Alu -12 300 1 1210 253 83 69 chr20 38975267 38975625 -33178257 - L1MC4 LINE L1 -1161 6800 6448 2215 191 157 2 chr20 38975625 38976108 -33177774 - MER68 LTR ERV1 -4 558 1 1210 253 83 69 chr20 38976108 38976678 -33177204 - L1MC4 LINE L1 -1513 6448 5843 437 289 72 63 chr20 38976770 38977088 -33176794 - L2 LINE L2 -914 2400 2080 357 231 149 8 chr20 38978737 38978858 -33175024 + MER117 DNA MER1_type 4 141 -56 480 204 96 64 chr20 38978908 38979016 -33174866 - MER5B DNA MER1_type 0 178 62 1904 134 10 16 chr20 38979016 38979322 -33174560 - AluJb SINE Alu -8 304 1 480 204 96 64 chr20 38979322 38979370 -33174512 - MER5B DNA MER1_type -116 62 17 2057 117 3 0 chr20 38979550 38979841 -33174041 + AluSx SINE Alu 19 310 -2 403 261 148 30 chr20 38981067 38981297 -33172585 - MLT1K LTR MaLR -2 586 330 2177 90 6 34 chr20 38983521 38983843 -33170039 - AluSp SINE Alu 0 313 1 203 367 76 43 chr20 38983852 38984220 -33169662 - L2 LINE L2 -607 2707 2328 314 331 182 6 chr20 38984513 38984694 -33169188 + MIR SINE MIR 49 261 -1 1036 201 0 0 chr20 38984697 38984866 -33169016 - FAM SINE Alu -6 169 1 234 62 0 0 chr20 38985053 38985085 -33168797 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 2262 65 24 0 chr20 38985153 38985445 -33168437 + AluY SINE Alu 1 299 -12 2039 120 3 3 chr20 38985479 38985770 -33168112 + AluSq SINE Alu 1 291 -22 191 236 179 28 chr20 38986315 38986421 -33167461 - L2 LINE L2 -941 2373 2252 180 0 0 0 chr20 38986602 38986622 -33167260 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 599 213 188 20 chr20 38987173 38987375 -33166507 - Charlie8 DNA MER1_type -2181 236 1 464 289 63 26 chr20 38987949 38988139 -33165743 - MIR SINE MIR -26 236 40 217 299 39 13 chr20 38989792 38989869 -33164013 - MIR3 SINE MIR -17 191 113 316 322 74 43 chr20 38990116 38990374 -33163508 - L2 LINE L2 -16 3256 2991 452 274 115 29 chr20 38990606 38990814 -33163068 + L2 LINE L2 1996 2221 -1093 1372 155 133 52 chr20 38990814 38990854 -33163028 - MLT2B1 LTR ERVL -8 507 472 2215 99 0 0 chr20 38990854 38991147 -33162735 - AluSx SINE Alu -18 294 2 1372 155 133 52 chr20 38991147 38991530 -33162352 - MLT2B1 LTR ERVL -43 472 1 556 240 123 28 chr20 38991530 38991709 -33162173 + L2 LINE L2 2213 2408 -906 4870 155 31 61 chr20 38991718 38991906 -33161976 - L1MA9 LINE L1 -25 6287 6095 1070 179 11 139 chr20 38991906 38992179 -33161703 - MER8 DNA MER2_type 0 239 2 4870 155 31 61 chr20 38992179 38992452 -33161430 - L1MA9 LINE L1 -217 6095 5815 2158 103 30 0 chr20 38992452 38992753 -33161129 - AluSg SINE Alu 0 310 1 2368 81 0 0 chr20 38992763 38993071 -33160811 - AluY SINE Alu -3 308 1 4870 155 31 61 chr20 38993071 38993844 -33160038 - L1MA9 LINE L1 -506 5806 5012 707 152 7 90 chr20 38993844 38993989 -33159893 + AluJo SINE Alu 1 133 -169 4870 155 31 61 chr20 38993989 38994173 -33159709 - L1MA9 LINE L1 -1300 5012 4824 1708 161 38 0 chr20 38994173 38994464 -33159418 - AluJo SINE Alu -10 302 1 4870 155 31 61 chr20 38994464 38994899 -33158983 - L1MA9 LINE L1 -1488 4824 4478 975 218 224 8 chr20 38994900 38995271 -33158611 + L2 LINE L2 2424 2874 -440 704 148 0 33 chr20 38995349 38995471 -33158411 - L1MB5 LINE L1 0 6174 6057 1765 170 0 0 chr20 38995479 38995768 -33158114 - AluJo SINE Alu -23 289 1 923 171 27 132 chr20 38995769 38995798 -33158084 + L1ME2 LINE L1 5557 5587 -577 1748 74 4 0 chr20 38995798 38996028 -33157854 + L1PA14 LINE L1 5928 6158 -3 923 171 27 132 chr20 38996028 38996291 -33157591 + L1ME2 LINE L1 5587 5813 -351 1066 173 0 12 chr20 38996291 38996459 -33157423 + AluJo SINE Alu 137 302 0 923 171 27 132 chr20 38996459 38996498 -33157384 + L1ME2 LINE L1 5813 5854 -310 1922 121 5 88 chr20 38996500 38996766 -33157116 + MER47A DNA MER2_type 25 312 -2011 1265 192 84 34 chr20 38996766 38997063 -33156819 - AluJo SINE Alu 0 312 1 1922 121 5 88 chr20 38997063 38997081 -33156801 + MER47A DNA MER2_type 312 330 -1993 1573 112 100 4 chr20 38997081 38997340 -33156542 - L1MA3 LINE L1 -7 6298 6015 1922 121 5 88 chr20 38997340 38997427 -33156455 + MER47A DNA MER2_type 330 366 0 699 220 125 78 chr20 38997429 38997564 -33156318 + L1ME2 LINE L1 5905 6057 -107 1727 172 7 3 chr20 38997564 38997860 -33156022 - AluJb SINE Alu -7 305 9 699 220 125 78 chr20 38997860 38997956 -33155926 + L1ME2 LINE L1 6057 6147 -17 566 121 66 0 chr20 38997977 38998068 -33155814 + FLAM_A SINE Alu 43 139 -3 366 315 122 11 chr20 38998069 38998250 -33155632 - MIR SINE MIR -14 248 48 2315 65 10 0 chr20 38998256 38998564 -33155318 + AluY SINE Alu 1 311 0 372 279 10 4 chr20 38998620 38998739 -33155143 - MIR SINE MIR -66 142 40 1789 146 0 35 chr20 38999461 38999776 -33154106 + AluJo SINE Alu 1 304 -8 181 283 67 17 chr20 38999993 39000053 -33153829 - MIR3 SINE MIR -28 180 118 189 340 40 20 chr20 39000193 39000293 -33153589 + MIR3 SINE MIR 107 208 0 285 256 97 97 chr20 39000415 39000653 -33153229 - L2 LINE L2 -9 3263 3026 183 250 0 0 chr20 39000711 39000759 -33153123 + MIR SINE MIR 85 132 -76 1871 129 10 26 chr20 39001153 39001455 -33152427 - AluSx SINE Alu -13 299 3 380 263 134 28 chr20 39001856 39001943 -33151939 + MIR SINE MIR 65 141 -121 1232 161 52 26 chr20 39001943 39002173 -33151709 + MER46A DNA MER2_type 1 236 0 380 263 134 28 chr20 39002173 39002264 -33151618 + MIR SINE MIR 141 262 0 687 292 98 8 chr20 39002272 39002649 -33151233 + L2 LINE L2 2299 2709 -605 858 103 8 0 chr20 39002653 39002779 -33151103 + FLAM_C SINE Alu 11 137 -6 980 147 0 0 chr20 39003012 39003162 -33150720 - FRAM SINE Alu -4 172 23 888 151 14 0 chr20 39003229 39003375 -33150507 + FRAM SINE Alu 22 169 -7 223 348 0 0 chr20 39003530 39003599 -33150283 + L2 LINE L2 3142 3210 -62 217 146 0 0 chr20 39003659 39003700 -33150182 + MIR SINE MIR 80 120 -142 2092 97 3 19 chr20 39004805 39005113 -33148769 - AluSx SINE Alu -9 303 1 822 184 32 0 chr20 39005259 39005417 -33148465 - AluJb SINE Alu -11 301 139 356 279 157 7 chr20 39005652 39005799 -33148083 + LTR16C LTR ERVL 323 491 0 1338 127 111 94 chr20 39006293 39006600 -33147282 + AluJo SINE Alu 1 312 0 648 122 24 8 chr20 39006605 39006728 -33147154 + GA-rich Low_complexity Low_complexity 1 125 0 927 179 0 12 chr20 39006731 39006904 -33146978 + FRAM SINE Alu 1 170 -6 2236 107 7 0 chr20 39006968 39007277 -33146605 + AluSq SINE Alu 3 313 0 1082 156 6 0 chr20 39007494 39007667 -33146215 + AluJb SINE Alu 134 307 -5 405 216 155 7 chr20 39007787 39007935 -33145947 - MIR SINE MIR -79 183 14 257 322 35 17 chr20 39008122 39008237 -33145645 - MIR SINE MIR -58 150 34 222 165 55 121 chr20 39008299 39008390 -33145492 + L2 LINE L2 3169 3253 -19 1890 138 10 7 chr20 39009081 39009379 -33144503 - AluJo SINE Alu -12 300 2 215 324 120 14 chr20 39009497 39009639 -33144243 - MIR SINE MIR 0 262 106 379 320 20 7 chr20 39009904 39010051 -33143831 + MIR3 SINE MIR 44 192 -16 1989 140 96 117 chr20 39010151 39010281 -33143601 - L1MC3 LINE L1 -96 7689 7558 2116 122 0 0 chr20 39010281 39010584 -33143298 - AluSx SINE Alu -8 304 2 1989 140 96 117 chr20 39010584 39010721 -33143161 - L1MC3 LINE L1 -227 7558 7420 2248 110 0 0 chr20 39010721 39011030 -33142852 - AluSc SINE Alu 0 309 1 1754 152 3 32 chr20 39011030 39011339 -33142543 - AluJb SINE Alu -12 300 1 1989 140 96 117 chr20 39011339 39011589 -33142293 - L1MC3 LINE L1 -363 7422 7181 293 271 83 0 chr20 39011590 39011686 -33142196 - MLT1F1 LTR MaLR -451 116 13 2368 85 0 0 chr20 39011938 39012243 -33141639 - AluSx SINE Alu -7 305 1 389 259 120 32 chr20 39012259 39012417 -33141465 + MIR SINE MIR 45 216 -46 225 254 0 0 chr20 39012703 39012758 -33141124 + MIR SINE MIR 68 122 -86 421 143 205 148 chr20 39013051 39013138 -33140744 - L1MC1 LINE L1 -113 7659 7578 1575 137 35 28 chr20 39013138 39013423 -33140459 - AluJb SINE Alu -25 287 1 421 143 205 148 chr20 39013423 39013559 -33140323 - L1MC1 LINE L1 -194 7578 6145 1828 150 0 36 chr20 39014104 39014411 -33139471 - AluJo SINE Alu -16 296 1 374 247 12 0 chr20 39014559 39014644 -33139238 + L2 LINE L2 3209 3294 -19 240 219 104 14 chr20 39014658 39014799 -33139083 - L2 LINE L2 -263 3009 2858 364 259 120 0 chr20 39015582 39015690 -33138192 - MIR SINE MIR -61 147 27 307 331 45 28 chr20 39015759 39015937 -33137945 - L2 LINE L2 -167 3105 2925 300 315 176 0 chr20 39016163 39016328 -33137554 - MIR SINE MIR -63 199 6 957 266 10 0 chr20 39016380 39016587 -33137295 + MER63A DNA MER1_type 2 210 0 249 304 111 22 chr20 39016897 39017032 -33136850 - MIR SINE MIR -77 185 39 223 154 26 0 chr20 39017160 39017199 -33136683 + MIR SINE MIR 108 147 -61 310 276 59 40 chr20 39017673 39017825 -33136057 + MIR SINE MIR 108 262 0 180 0 0 0 chr20 39018139 39018159 -33135723 + (TCC)n Simple_repeat Simple_repeat 1 20 0 300 292 17 0 chr20 39018228 39018348 -33135534 + (CCCG)n Simple_repeat Simple_repeat 2 123 0 21 36 0 0 chr20 39018697 39018725 -33135157 + GC_rich Low_complexity Low_complexity 1 28 0 190 247 45 56 chr20 39019002 39019091 -33134791 + MIR SINE MIR 49 136 -126 185 227 0 23 chr20 39019524 39019568 -33134314 + L2 LINE L2 3266 3308 -5 282 337 11 0 chr20 39019667 39019759 -33134123 + MIR SINE MIR 64 156 -106 434 255 17 46 chr20 39019780 39019933 -33133949 - MIR SINE MIR -62 146 17 423 284 24 50 chr20 39020875 39021132 -33132750 - L2 LINE L2 -256 3016 2768 374 312 134 10 chr20 39021457 39021659 -33132223 + MIR SINE MIR 24 250 -12 330 356 9 0 chr20 39021956 39022071 -33131811 - MIR SINE MIR -63 145 30 686 209 7 0 chr20 39022833 39022972 -33130910 + MER117 DNA MER1_type 58 197 0 229 341 182 8 chr20 39022972 39023104 -33130778 - MIR3 SINE MIR -48 160 6 189 241 66 80 chr20 39023124 39023261 -33130621 + MIR3 SINE MIR 1 135 -73 302 188 31 0 chr20 39023319 39023383 -33130499 + MIR SINE MIR 81 146 -62 301 270 117 0 chr20 39023804 39023915 -33129967 - MIR SINE MIR -109 153 30 586 318 64 26 chr20 39024099 39024332 -33129550 + MIR SINE MIR 5 246 -16 300 246 0 0 chr20 39025393 39025458 -33128424 - MIR SINE MIR -63 145 81 277 311 219 0 chr20 39025659 39025778 -33128104 - MIR SINE MIR -71 191 47 721 229 32 19 chr20 39025891 39026111 -33127771 + MIR SINE MIR 36 262 0 201 331 105 15 chr20 39026071 39026204 -33127678 - MIR SINE MIR -34 228 84 * 226 222 0 19 chr20 39026245 39026299 -33127583 - MIR SINE MIR -68 140 88 535 346 24 5 chr20 39026316 39026521 -33127361 + MIR SINE MIR 46 254 -8 245 305 73 33 chr20 39026844 39026995 -33126887 + MIR SINE MIR 67 223 -39 345 327 121 27 chr20 39027650 39027947 -33125935 - L2 LINE L2 -109 3163 2839 183 276 35 0 chr20 39028195 39028253 -33125629 - L2 LINE L2 -218 3054 2995 495 265 114 12 chr20 39028892 39029058 -33124824 + MIR SINE MIR 29 211 -51 261 0 0 0 chr20 39029462 39029491 -33124391 + (TCCA)n Simple_repeat Simple_repeat 4 32 0 260 298 57 44 chr20 39029647 39029805 -33124077 - L2 LINE L2 -128 3144 2985 514 233 99 16 chr20 39029819 39030193 -33123689 - L2 LINE L2 -254 3059 2641 227 362 60 9 chr20 39030184 39030300 -33123582 + MIR SINE MIR 141 262 0 * 181 370 34 8 chr20 39030464 39030583 -33123299 - MIR SINE MIR -119 143 22 776 251 181 35 chr20 39031296 39031903 -33121979 - L2 LINE L2 -1 3312 2606 466 272 47 39 chr20 39032025 39032257 -33121625 - L1MC5 LINE L1 -83 7878 7645 1804 131 10 45 chr20 39032269 39032581 -33121301 - AluJo SINE Alu -1 311 11 332 306 129 8 chr20 39032656 39032780 -33121102 + MIR SINE MIR 110 248 -14 956 265 9 0 chr20 39032805 39033028 -33120854 - MIR SINE MIR -2 260 36 1671 171 9 29 chr20 39034101 39034417 -33119465 - AluJo SINE Alu -2 310 1 215 300 29 0 chr20 39034607 39034677 -33119205 + MIR SINE MIR 78 149 -59 209 214 0 0 chr20 39034940 39034982 -33118900 - MIR SINE MIR -104 158 117 222 299 153 6 chr20 39035027 39035184 -33118698 + L2 LINE L2 2920 3099 -173 313 217 0 0 chr20 39035895 39035955 -33117927 + MIR SINE MIR 84 143 -119 505 271 88 24 chr20 39036259 39036429 -33117453 + MIR SINE MIR 22 202 -60 209 319 14 0 chr20 39036648 39036717 -33117165 + MIR SINE MIR 76 145 -63 275 385 30 12 chr20 39036895 39037061 -33116821 + L2 LINE L2 2917 3085 -187 642 279 51 28 chr20 39037128 39037343 -33116539 - MIR SINE MIR -3 259 40 468 0 0 0 chr20 39037376 39037428 -33116454 + (CA)n Simple_repeat Simple_repeat 2 53 0 1750 170 10 3 chr20 39037646 39037940 -33115942 - AluJo SINE Alu -16 296 1 686 271 164 26 chr20 39037944 39038401 -33115481 - L1MC4a LINE L1 -1870 5938 5419 7888 181 65 54 chr20 39038414 39039146 -33114736 - L1MB8 LINE L1 -7 6171 5449 1621 152 86 24 chr20 39039146 39039436 -33114446 - AluJo SINE Alu -4 308 1 7888 181 65 54 chr20 39039436 39039568 -33114314 - L1MB8 LINE L1 -729 5449 5320 795 197 0 0 chr20 39039568 39039695 -33114187 - FLAM_A SINE Alu -6 127 1 1623 178 20 10 chr20 39039699 39039991 -33113891 - AluJo SINE Alu -8 304 10 7888 181 65 54 chr20 39039991 39040192 -33113690 - L1MB8 LINE L1 -860 5318 5121 2269 107 0 0 chr20 39040192 39040502 -33113380 + AluSx SINE Alu 1 310 -2 7888 181 65 54 chr20 39040502 39040597 -33113285 - L1MB8 LINE L1 -1057 5121 5029 2760 10 0 0 chr20 39040597 39040907 -33112975 - AluYa8 SINE Alu 0 310 1 7888 181 65 54 chr20 39040907 39041844 -33112038 - L1MB8 LINE L1 -1149 5029 4104 2177 125 0 3 chr20 39041844 39042156 -33111726 - AluSx SINE Alu -1 311 1 7888 181 65 54 chr20 39042156 39042349 -33111533 - L1MB8 LINE L1 -2074 4104 3915 2160 107 0 0 chr20 39042349 39042640 -33111242 + AluSx SINE Alu 1 291 -21 7888 181 65 54 chr20 39042640 39043032 -33110850 - L1MB8 LINE L1 -2263 3915 3529 2213 101 3 19 chr20 39043032 39043350 -33110532 - AluSq SINE Alu 0 313 1 7888 181 65 54 chr20 39043350 39043747 -33110135 - L1MB8 LINE L1 -2649 3529 3138 2146 116 10 7 chr20 39043747 39044057 -33109825 - AluSq SINE Alu -2 311 1 1453 144 76 43 chr20 39044059 39044336 -33109546 - AluJb SINE Alu -18 294 9 7888 181 65 54 chr20 39044336 39044721 -33109161 - L1MB8 LINE L1 -3040 3138 2661 375 197 51 7 chr20 39044724 39044864 -33109018 - L1MC4a LINE L1 -720 5436 5287 404 336 41 33 chr20 39044876 39045190 -33108692 - L1MCa LINE L1 -1339 6983 1995 363 315 0 22 chr20 39045112 39045204 -33108678 + L1MC4 LINE L1 6614 6703 -1339 * 345 352 0 0 chr20 39045199 39045287 -33108595 - L1MC4 LINE L1 -1340 6702 6615 * 256 233 0 23 chr20 39045300 39045386 -33108496 + (CA)n Simple_repeat Simple_repeat 2 85 0 364 279 35 0 chr20 39045386 39045472 -33108410 - L1MC4 LINE L1 -1339 6703 6615 304 156 13 104 chr20 39045454 39045531 -33108351 - L1MCa LINE L1 -4362 2064 1995 * 862 148 8 0 chr20 39045538 39045666 -33108216 - AluJb SINE Alu -183 129 1 456 325 63 20 chr20 39045672 39046138 -33107744 - L1MC4a LINE L1 -1102 5044 4554 2191 105 0 0 chr20 39046138 39046434 -33107448 - AluSg SINE Alu -14 296 1 456 325 63 20 chr20 39046434 39046459 -33107423 - L1MC4a LINE L1 -1592 4554 4532 550 297 57 52 chr20 39046460 39046626 -33107256 - L1MC4a LINE L1 -1776 4370 4201 2134 134 0 0 chr20 39046626 39046931 -33106951 - AluSx SINE Alu -7 305 1 550 297 57 52 chr20 39046931 39046976 -33106906 - L1MC4a LINE L1 -1945 4201 4158 2338 104 0 0 chr20 39046979 39047287 -33106595 - AluSx SINE Alu -4 308 1 1810 169 0 19 chr20 39047287 39047594 -33106288 - AluJb SINE Alu -11 301 1 754 199 0 7 chr20 39047595 39047731 -33106151 - AluJb SINE Alu -177 135 1 2106 169 21 21 chr20 39047792 39048164 -33105718 - MLT1A2 LTR MaLR 0 374 3 314 239 300 22 chr20 39048368 39048548 -33105334 - MIR SINE MIR 0 262 33 2109 112 3 0 chr20 39048572 39048859 -33105023 - AluSq SINE Alu -25 288 1 565 280 36 18 chr20 39049036 39049204 -33104678 + MIR SINE MIR 58 228 -34 457 258 98 0 chr20 39049339 39049471 -33104411 - MIR SINE MIR -110 152 8 1243 99 26 0 chr20 39049940 39050131 -33103751 - L1MA3 LINE L1 0 6305 6110 253 148 19 0 chr20 39050131 39050185 -33103697 - Alu SINE Alu -3 299 245 1327 121 97 0 chr20 39050207 39050413 -33103469 - AluJo SINE Alu 0 312 87 372 299 51 8 chr20 39050445 39050562 -33103320 - MIR SINE MIR -24 238 117 319 345 53 12 chr20 39050584 39050755 -33103127 - L1MC4a LINE L1 -1910 5898 5721 242 295 0 0 chr20 39050965 39051026 -33102856 + L2 LINE L2 3209 3269 -3 1597 110 4 0 chr20 39051575 39051803 -33102079 + AluSg/x SINE Alu 76 304 -6 1277 112 0 0 chr20 39051803 39051982 -33101900 + AluSg/x SINE Alu 132 310 0 312 91 0 0 chr20 39051999 39052043 -33101839 + (A)n Simple_repeat Simple_repeat 1 44 0 251 220 0 0 chr20 39052140 39052190 -33101692 + MIR SINE MIR 110 159 -103 601 337 6 0 chr20 39052413 39052585 -33101297 + MIR SINE MIR 80 252 -10 216 359 13 0 chr20 39052675 39052753 -33101129 - L2 LINE L2 -1 3312 3234 337 276 8 79 chr20 39052839 39052966 -33100916 + L1ME4a LINE L1 5974 6091 -30 272 303 272 10 chr20 39052968 39053163 -33100719 - MIR SINE MIR -1 261 16 365 247 142 12 chr20 39053401 39053563 -33100319 - L3 LINE CR1 -24 1553 1371 26 0 0 0 chr20 39053565 39053591 -33100291 + AT_rich Low_complexity Low_complexity 1 26 0 196 350 21 21 chr20 39053973 39054113 -33099769 - MIR3 SINE MIR -21 187 48 616 207 40 33 chr20 39054323 39054473 -33099409 - MIR SINE MIR -108 154 4 457 299 49 0 chr20 39054629 39054773 -33099109 - MIR SINE MIR -78 184 34 611 309 111 33 chr20 39055067 39055400 -33098482 - L2 LINE L2 0 3272 2914 255 207 195 0 chr20 39055495 39055577 -33098305 - L2 LINE L2 -4 3268 3171 259 300 50 12 chr20 39055675 39055755 -33098127 - MIR SINE MIR -89 173 91 2085 109 0 13 chr20 39055779 39056092 -33097790 - AluSx SINE Alu -3 309 1 232 286 83 24 chr20 39057394 39057478 -33096404 - L2 LINE L2 0 3272 3184 205 235 0 0 chr20 39057744 39057795 -33096087 - L2 LINE L2 -1 3312 3262 202 283 0 0 chr20 39058447 39058507 -33095375 + CT-rich Low_complexity Low_complexity 2 61 0 330 357 21 0 chr20 39059222 39059365 -33094517 + L2 LINE L2 2900 3045 -268 575 207 5 0 chr20 39059471 39059603 -33094279 - MIR SINE MIR -62 146 15 258 284 115 54 chr20 39059690 39059838 -33094044 + L2 LINE L2 3116 3272 0 796 214 20 11 chr20 39059856 39060080 -33093802 - MIR SINE MIR -9 253 30 2054 112 3 7 chr20 39060520 39060814 -33093068 + AluJo SINE Alu 1 293 -19 333 327 36 0 chr20 39061800 39061910 -33091972 - MIR SINE MIR -72 136 23 236 191 0 0 chr20 39062096 39062138 -33091744 - MIR SINE MIR -109 153 112 416 271 0 34 chr20 39062205 39062323 -33091559 - MIR SINE MIR -92 170 57 2090 116 3 26 chr20 39062445 39062755 -33091127 - AluSx SINE Alu -3 309 7 301 296 24 24 chr20 39062803 39062928 -33090954 - MIR SINE MIR -125 137 13 436 313 15 0 chr20 39063400 39063531 -33090351 + MIR3 SINE MIR 38 170 -38 292 169 0 31 chr20 39063554 39063619 -33090263 + MIR SINE MIR 78 140 -68 2342 92 0 0 chr20 39063628 39063933 -33089949 + AluSx SINE Alu 1 305 -7 212 222 37 0 chr20 39063957 39064011 -33089871 + MIR SINE MIR 81 136 -72 309 139 23 116 chr20 39064695 39064781 -33089101 + MIR SINE MIR 77 155 -53 234 277 36 0 chr20 39064912 39065024 -33088858 + CT-rich Low_complexity Low_complexity 2 117 0 287 258 62 0 chr20 39065222 39065319 -33088563 + MIR3 SINE MIR 66 168 -40 221 327 139 64 chr20 39065478 39065744 -33088138 - L3 LINE CR1 -13 1564 1279 215 319 123 14 chr20 39066382 39066520 -33087362 - L2 LINE L2 -248 3024 2872 183 244 22 0 chr20 39066539 39066584 -33087298 + MIR SINE MIR 103 148 -114 234 256 12 12 chr20 39066938 39067020 -33086862 + (TG)n Simple_repeat Simple_repeat 1 82 0 319 289 35 8 chr20 39067185 39067331 -33086551 + MIR SINE MIR 2 131 -77 425 282 179 0 chr20 39067813 39067969 -33085913 - MIR SINE MIR -8 254 71 409 281 16 23 chr20 39068467 39068595 -33085287 + CT-rich Low_complexity Low_complexity 4 130 0 380 317 145 20 chr20 39069084 39069480 -33084402 + L2 LINE L2 2727 3176 -96 201 283 28 97 chr20 39070094 39070239 -33083643 + MIR SINE MIR 27 161 -101 629 279 93 13 chr20 39071132 39071358 -33082524 - MIR SINE MIR 0 262 19 2148 118 0 3 chr20 39071605 39071902 -33081980 - AluSx SINE Alu -16 296 1 414 353 12 18 chr20 39071951 39072118 -33081764 - MIR SINE MIR -72 190 25 1612 158 16 0 chr20 39072474 39072727 -33081155 - AluJo SINE Alu -44 268 12 1161 206 134 18 chr20 39072767 39073035 -33080847 - L1ME1 LINE L1 -5 6161 5833 1794 161 0 37 chr20 39073035 39073359 -33080523 - AluJo SINE Alu 0 312 1 1161 206 134 18 chr20 39073359 39073478 -33080404 - L1ME1 LINE L1 -333 5833 5729 349 260 89 24 chr20 39074031 39074154 -33079728 - MIR SINE MIR -24 238 108 202 223 48 47 chr20 39074675 39074765 -33079117 + MIR SINE MIR 86 137 -71 297 170 178 42 chr20 39074956 39075054 -33078828 + MIR3 SINE MIR 44 155 -53 386 288 50 7 chr20 39076049 39076188 -33077694 - MIR3 SINE MIR -21 187 43 196 323 122 49 chr20 39076346 39076510 -33077372 + L3 LINE CR1 1313 1488 -89 203 191 225 11 chr20 39076803 39076892 -33076990 + MIR SINE MIR 33 140 -68 213 121 0 0 chr20 39076931 39076964 -33076918 + (TG)n Simple_repeat Simple_repeat 2 34 0 273 75 0 0 chr20 39078203 39078243 -33075639 + (TG)n Simple_repeat Simple_repeat 2 41 0 603 163 42 58 chr20 39078965 39079142 -33074740 - L1PB3 LINE L1 0 6156 5990 279 298 8 41 chr20 39079142 39079193 -33074689 + CT-rich Low_complexity Low_complexity 2 53 -65 1509 153 46 18 chr20 39079193 39079474 -33074408 - AluJo SINE Alu -23 289 1 279 298 8 41 chr20 39079474 39079543 -33074339 + CT-rich Low_complexity Low_complexity 53 118 0 338 329 25 41 chr20 39079551 39079794 -33074088 + L2 LINE L2 2823 3061 -211 206 148 74 0 chr20 39080407 39080461 -33073421 + (TG)n Simple_repeat Simple_repeat 2 59 0 360 164 0 0 chr20 39080592 39080659 -33073223 + (CA)n Simple_repeat Simple_repeat 1 67 0 223 302 0 0 chr20 39081182 39081245 -33072637 + (TG)n Simple_repeat Simple_repeat 1 63 0 2152 114 0 16 chr20 39081649 39081956 -33071926 - AluSc SINE Alu -7 302 1 827 175 100 0 chr20 39082110 39082310 -33071572 + ORSL DNA AcHobo 9 228 -47 204 125 0 0 chr20 39082470 39082502 -33071380 + (TG)n Simple_repeat Simple_repeat 1 32 0 2071 135 0 6 chr20 39082556 39082868 -33071014 - AluJb SINE Alu -2 310 1 198 0 0 0 chr20 39082919 39082941 -33070941 + (TTCA)n Simple_repeat Simple_repeat 2 23 0 366 23 0 0 chr20 39083218 39083261 -33070621 + (TG)n Simple_repeat Simple_repeat 1 43 0 222 105 0 0 chr20 39083429 39083467 -33070415 + (TG)n Simple_repeat Simple_repeat 1 38 0 277 194 40 57 chr20 39083552 39083676 -33070206 + (GTGTG)n Simple_repeat Simple_repeat 5 126 0 511 71 36 0 chr20 39083766 39083850 -33070032 + (TTCCC)n Simple_repeat Simple_repeat 4 90 0 374 254 8 32 chr20 39083931 39084057 -33069825 + (TCTCTG)n Simple_repeat Simple_repeat 4 126 0 599 219 6 0 chr20 39084154 39084332 -33069550 + (TG)n Simple_repeat Simple_repeat 1 179 0 381 151 0 0 chr20 39084677 39084763 -33069119 + (TG)n Simple_repeat Simple_repeat 1 86 0 189 0 0 0 chr20 39084887 39084908 -33068974 + (TG)n Simple_repeat Simple_repeat 2 22 0 191 289 88 44 chr20 39085016 39085130 -33068752 - L3b LINE CR1 -174 1409 1291 225 154 0 0 chr20 39085150 39085189 -33068693 + (TG)n Simple_repeat Simple_repeat 1 39 0 226 225 0 0 chr20 39085367 39085407 -33068475 + (TCCA)n Simple_repeat Simple_repeat 1 40 0 421 243 9 9 chr20 39086016 39086127 -33067755 - L1ME3 LINE L1 -6 6156 6046 207 0 0 0 chr20 39086433 39086456 -33067426 + (TG)n Simple_repeat Simple_repeat 1 23 0 202 266 31 0 chr20 39086474 39086538 -33067344 + C-rich Low_complexity Low_complexity 5 70 0 186 157 29 29 chr20 39087855 39087925 -33065957 + (TCTG)n Simple_repeat Simple_repeat 4 73 0 689 239 88 62 chr20 39088899 39089171 -33064711 + L2 LINE L2 3033 3311 -2 216 179 0 0 chr20 39090077 39090116 -33063766 + (TCTG)n Simple_repeat Simple_repeat 2 40 0 261 0 0 0 chr20 39090187 39090216 -33063666 + (CA)n Simple_repeat Simple_repeat 2 30 0 333 125 0 0 chr20 39090344 39090400 -33063482 + (TG)n Simple_repeat Simple_repeat 2 57 0 305 345 123 38 chr20 39090553 39090976 -33062906 - HAL1 LINE L1 -1219 1288 830 639 179 0 0 chr20 39091057 39091236 -33062646 + (TG)n Simple_repeat Simple_repeat 2 180 0 762 178 2 7 chr20 39091297 39091748 -33062134 + (TG)n Simple_repeat Simple_repeat 1 448 0 527 259 4 0 chr20 39092759 39092999 -33060883 + (TG)n Simple_repeat Simple_repeat 1 241 0 245 229 0 43 chr20 39093099 39093169 -33060713 - L1ME4a LINE L1 0 6121 6055 201 204 0 80 chr20 39093321 39093409 -33060473 + (TCTCTG)n Simple_repeat Simple_repeat 1 81 0 282 116 0 0 chr20 39093725 39093768 -33060114 + (TG)n Simple_repeat Simple_repeat 2 44 0 350 85 37 12 chr20 39094177 39094259 -33059623 + (TG)n Simple_repeat Simple_repeat 1 84 0 337 295 7 58 chr20 39094364 39094503 -33059379 - L1ME4a LINE L1 -1 6120 5989 228 86 0 0 chr20 39094714 39094749 -33059133 + (TG)n Simple_repeat Simple_repeat 1 35 0 685 195 4 4 chr20 39096160 39096432 -33057450 + GA-rich Low_complexity Low_complexity 1 272 0 303 210 0 0 chr20 39096462 39096562 -33057320 + GA-rich Low_complexity Low_complexity 1 100 0 328 328 78 22 chr20 39097429 39097609 -33056273 + L2 LINE L2 2960 3149 -123 845 267 42 9 chr20 39097663 39097880 -33056002 - MIR SINE MIR -10 252 29 746 293 167 49 chr20 39098696 39099366 -33054516 + L2 LINE L2 1686 2434 -880 969 148 0 13 chr20 39099368 39099523 -33054359 + AluSg/x SINE Alu 130 282 -30 222 37 0 0 chr20 39099524 39099551 -33054331 + (CA)n Simple_repeat Simple_repeat 1 27 0 244 390 75 0 chr20 39099644 39099831 -33054051 + L2 LINE L2 2197 2397 -917 503 371 106 20 chr20 39099881 39100239 -33053643 + L2 LINE L2 522 910 -2404 2271 287 146 15 chr20 39100271 39101578 -33052304 + L2 LINE L2 1816 3300 -13 228 35 0 0 chr20 39101762 39101791 -33052091 + (TG)n Simple_repeat Simple_repeat 1 29 0 206 214 0 0 chr20 39101886 39101928 -33051954 + (TTCA)n Simple_repeat Simple_repeat 2 43 0 692 212 0 11 chr20 39102132 39102311 -33051571 + (TCCA)n Simple_repeat Simple_repeat 1 177 0 866 170 0 11 chr20 39102347 39102529 -33051353 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 315 0 0 0 chr20 39102738 39102773 -33051109 + (TG)n Simple_repeat Simple_repeat 2 36 0 211 378 57 25 chr20 39103133 39103416 -33050466 + L2 LINE L2 2296 2587 -727 257 128 21 0 chr20 39103442 39103489 -33050393 + (TCCA)n Simple_repeat Simple_repeat 4 51 0 1959 137 7 7 chr20 39103666 39103965 -33049917 - AluJb SINE Alu -13 299 1 242 349 23 0 chr20 39104144 39104230 -33049652 + L2 LINE L2 3213 3300 -13 207 0 0 0 chr20 39104414 39104437 -33049445 + (TG)n Simple_repeat Simple_repeat 1 23 0 228 217 0 0 chr20 39104528 39104574 -33049308 + (TTCA)n Simple_repeat Simple_repeat 2 47 0 2053 133 0 10 chr20 39105498 39105807 -33048075 - AluJb SINE Alu -6 306 1 396 0 0 0 chr20 39106050 39106094 -33047788 + (TC)n Simple_repeat Simple_repeat 1 44 0 1105 235 0 4 chr20 39106131 39106391 -33047491 + L1M4 LINE L1 4060 4318 -1828 384 356 21 17 chr20 39106474 39106710 -33047172 - L1MC4a LINE L1 -1878 5930 5694 509 136 75 0 chr20 39108103 39108414 -33045468 + (TCCA)n Simple_repeat Simple_repeat 1 334 0 292 218 69 0 chr20 39108436 39108537 -33045345 + (TCCA)n Simple_repeat Simple_repeat 2 109 0 234 274 204 0 chr20 39108541 39108654 -33045228 - L2 LINE L2 0 3272 3137 351 266 0 0 chr20 39108724 39108837 -33045045 + (TG)n Simple_repeat Simple_repeat 1 113 0 306 306 82 0 chr20 39110447 39110617 -33043265 - LTR33 LTR ERVL -317 204 21 181 279 207 27 chr20 39111042 39111153 -33042729 - L2 LINE L2 -6 3266 3136 530 112 63 7 chr20 39111206 39111349 -33042533 + (TG)n Simple_repeat Simple_repeat 1 151 0 1167 131 0 35 chr20 39112687 39112886 -33040996 + AluJo SINE Alu 99 290 -22 513 289 26 11 chr20 39113191 39113381 -33040501 - L1MC4a LINE L1 -1929 5879 5687 313 280 137 23 chr20 39113576 39113751 -33040131 - LTR33 LTR ERVL 0 521 327 379 217 120 46 chr20 39113842 39114017 -33039865 - LTR33 LTR ERVL -310 211 24 450 0 0 0 chr20 39114396 39114446 -33039436 + (TG)n Simple_repeat Simple_repeat 1 50 0 976 107 9 5 chr20 39114673 39114894 -33038988 + (TCCA)n Simple_repeat Simple_repeat 1 222 0 194 81 27 0 chr20 39115578 39115615 -33038267 + (TCCA)n Simple_repeat Simple_repeat 1 38 0 201 274 123 0 chr20 39116236 39116309 -33037573 - L2 LINE L2 -2280 1034 953 1212 123 0 0 chr20 39116564 39116727 -33037155 - AluJo SINE Alu -21 291 129 871 139 0 40 chr20 39117613 39117764 -33036118 - AluJo SINE Alu -167 145 1 1701 164 4 0 chr20 39118234 39118503 -33035379 + AluJb SINE Alu 30 299 -13 229 222 69 14 chr20 39118503 39118575 -33035307 + MLT1F1-int LTR MaLR 819 894 -477 464 253 59 121 chr20 39118744 39119116 -33034766 + MLT1F1-int LTR MaLR 1023 1371 0 1008 100 0 0 chr20 39119143 39119283 -33034599 - AluYa8 SINE Alu -8 302 163 1786 187 86 69 chr20 39119283 39119817 -33034065 + MLT1F1 LTR MaLR 17 559 -8 869 132 6 19 chr20 39119914 39120073 -33033809 + MLT1A1 LTR MaLR 1 157 -208 5419 103 9 2 chr20 39120075 39120935 -33032947 + L1PA15 LINE L1 5297 6162 -3 1111 197 47 0 chr20 39120935 39121169 -33032713 + MLT1A1 LTR MaLR 121 365 0 835 218 76 76 chr20 39121563 39121781 -33032101 - L2 LINE L2 -47 3266 3046 1871 185 38 22 chr20 39121781 39122149 -33031733 - MLT1A2 LTR MaLR 0 374 1 835 218 76 76 chr20 39122149 39122284 -33031598 - L2 LINE L2 -266 3047 2913 709 312 54 22 chr20 39122332 39122742 -33031140 + L1MEc LINE L1 100 522 -5874 600 274 82 12 chr20 39122747 39123075 -33030807 + L1MEc LINE L1 626 976 -5420 * 608 286 61 0 chr20 39123063 39123210 -33030672 - MER91A DNA MER1_type -40 156 1 768 320 114 12 chr20 39123210 39123632 -33030250 - L2 LINE L2 -395 2919 2455 251 54 27 0 chr20 39124845 39124882 -33029000 + (TTCC)n Simple_repeat Simple_repeat 4 41 0 191 267 95 17 chr20 39125277 39125393 -33028489 - L2 LINE L2 -282 2990 2866 1467 118 0 0 chr20 39127019 39127538 -33026344 + (TGGA)n Simple_repeat Simple_repeat 1 519 0 219 193 35 18 chr20 39128568 39128625 -33025257 + GA-rich Low_complexity Low_complexity 4 61 0 445 217 70 16 chr20 39128925 39129054 -33024828 + MER63 DNA MER1_type 28 789 -273 214 318 12 0 chr20 39129559 39129644 -33024238 - L2 LINE L2 -67 3246 3161 599 145 23 8 chr20 39130762 39130893 -33022989 + (TGGA)n Simple_repeat Simple_repeat 1 133 0 651 125 0 0 chr20 39130907 39131011 -33022871 + (GGAA)n Simple_repeat Simple_repeat 1 104 0 691 304 43 10 chr20 39131888 39132191 -33021691 - MLT1F1-int LTR MaLR -751 620 308 398 255 38 25 chr20 39132231 39132388 -33021494 - MLT1F1-int LTR MaLR -1211 160 2 2051 196 76 60 chr20 39132390 39132940 -33020942 - MLT1F1 LTR MaLR -1 566 8 2153 140 0 3 chr20 39133017 39133317 -33020565 + AluSx SINE Alu 1 299 -13 1510 205 36 29 chr20 39133449 39133864 -33020018 - L1ME2 LINE L1 -1 6163 5746 959 93 0 36 chr20 39133864 39134003 -33019879 - AluSg/x SINE Alu -2 310 177 225 36 0 0 chr20 39134003 39134031 -33019851 - U2 snRNA snRNA -153 35 8 1572 91 20 0 chr20 39134031 39134228 -33019654 - AluSq SINE Alu -112 201 1 2287 179 16 20 chr20 39134230 39134696 -33019186 - L1ME2 LINE L1 -416 5748 5283 1502 163 28 78 chr20 39134696 39135015 -33018867 - AluJb SINE Alu -9 303 1 2287 179 16 20 chr20 39135015 39135041 -33018841 - L1ME2 LINE L1 -881 5283 5258 1670 212 36 38 chr20 39135028 39135346 -33018536 - L1ME2 LINE L1 -1159 4987 4669 * 2223 93 3 10 chr20 39135346 39135647 -33018235 - AluSq SINE Alu -14 299 1 1670 212 36 38 chr20 39135647 39135776 -33018106 - L1ME2 LINE L1 -1477 4669 4541 277 339 19 0 chr20 39135997 39136114 -33017768 + MIR SINE MIR 35 152 -68 202 393 0 9 chr20 39136184 39136296 -33017586 + L2 LINE L2 1157 1267 -2047 202 275 155 48 chr20 39137112 39137319 -33016563 + L2 LINE L2 1870 2098 -1216 954 158 12 23 chr20 39137350 39137521 -33016361 - FRAM SINE Alu 0 176 8 319 276 9 19 chr20 39137689 39137794 -33016088 + MLT1-int LTR MaLR 484 587 -784 288 221 0 73 chr20 39137909 39137977 -33015905 - L2 LINE L2 0 3272 3210 700 268 16 58 chr20 39138193 39138503 -33015379 + LTR16A1 LTR ERVL 161 457 0 2456 202 66 69 chr20 39138781 39139504 -33014378 + L1ME1 LINE L1 5441 6161 -5 189 0 0 0 chr20 39139512 39139533 -33014349 + (A)n Simple_repeat Simple_repeat 1 21 0 1169 168 79 113 chr20 39139542 39139861 -33014021 + AluJo SINE Alu 1 309 0 999 184 24 5 chr20 39139873 39140080 -33013802 + L1ME3 LINE L1 5545 5755 -407 1385 233 46 6 chr20 39140279 39140627 -33013255 + L1ME3 LINE L1 5778 6139 -23 1396 196 4 29 chr20 39140654 39140934 -33012948 + AluJo SINE Alu 40 312 0 210 159 43 0 chr20 39141291 39141360 -33012522 + CT-rich Low_complexity Low_complexity 3 74 0 354 287 228 0 chr20 39142087 39142289 -33011593 + L2 LINE L2 2669 2916 -398 2397 144 32 40 chr20 39142351 39142448 -33011434 + MLT1C LTR MaLR 1 97 -370 2399 107 0 0 chr20 39142448 39142756 -33011126 + AluSx SINE Alu 1 308 -4 2397 144 32 40 chr20 39142756 39142788 -33011094 + MLT1C LTR MaLR 97 128 -339 2388 125 57 45 chr20 39142788 39143211 -33010671 + MSTA LTR MaLR 1 428 0 2397 144 32 40 chr20 39143211 39143551 -33010331 + MLT1C LTR MaLR 128 467 0 417 291 23 107 chr20 39143554 39143901 -33009981 + L2 LINE L2 2952 3269 -44 2089 124 13 22 chr20 39144528 39144843 -33009039 + AluJo SINE Alu 1 312 0 322 236 49 57 chr20 39146196 39146319 -33007563 + L1MC4a LINE L1 6053 6174 -1634 701 260 50 20 chr20 39146871 39147071 -33006811 + MIR SINE MIR 39 244 -18 252 253 80 80 chr20 39147087 39147210 -33006672 + L2 LINE L2 2340 2465 -849 204 40 0 0 chr20 39147210 39147235 -33006647 + (TCC)n Simple_repeat Simple_repeat 2 26 0 252 253 80 80 chr20 39147235 39147273 -33006609 + L2 LINE L2 2464 2501 -813 378 316 35 65 chr20 39147276 39147586 -33006296 + L2 LINE L2 1822 2122 -1192 181 321 46 53 chr20 39147803 39147934 -33005948 + L2 LINE L2 2650 2779 -535 1394 169 27 71 chr20 39147934 39148341 -33005541 - L1M4 LINE L1 -744 5402 5014 290 293 147 17 chr20 39148445 39148561 -33005321 + L2 LINE L2 2732 2862 -452 564 229 100 57 chr20 39148880 39149340 -33004542 - L1ME4a LINE L1 -196 5925 5393 279 296 22 30 chr20 39149653 39149788 -33004094 - L1P LINE L1 -1134 5012 4879 637 314 150 42 chr20 39151922 39152502 -33001380 + L2 LINE L2 1983 2499 -773 1175 59 0 32 chr20 39152502 39152688 -33001194 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 637 314 150 42 chr20 39152688 39152703 -33001179 + L2 LINE L2 2499 2511 -761 1920 154 0 40 chr20 39152703 39153028 -33000854 - AluSx SINE Alu 0 312 1 637 314 150 42 chr20 39153028 39153571 -33000311 + L2 LINE L2 2511 3264 -8 811 310 47 52 chr20 39153578 39154000 -32999882 + L2 LINE L2 1706 2125 -1189 730 239 28 75 chr20 39154003 39154321 -32999561 + L1M4 LINE L1 4532 4834 -1312 1034 318 33 23 chr20 39154928 39155504 -32998378 - L1ME4a LINE L1 -215 5906 5325 195 42 0 0 chr20 39155716 39155740 -32998142 + (T)n Simple_repeat Simple_repeat 1 24 0 2363 108 0 7 chr20 39155760 39156066 -32997816 + AluSq SINE Alu 1 304 -9 24 32 0 0 chr20 39156116 39156147 -32997735 + AT_rich Low_complexity Low_complexity 1 31 0 278 274 53 44 chr20 39156655 39156768 -32997114 + MIR SINE MIR 39 152 -56 467 325 96 37 chr20 39156825 39157179 -32996703 - L2 LINE L2 -50 3263 2889 2263 99 0 0 chr20 39157189 39157506 -32996376 + AluSx SINE Alu 1 317 0 882 287 136 44 chr20 39159000 39159286 -32994596 + L2 LINE L2 1897 2155 -1159 2187 116 3 0 chr20 39159286 39159578 -32994304 - AluSx SINE Alu -19 293 1 882 287 136 44 chr20 39159578 39160203 -32993679 + L2 LINE L2 2155 2892 -422 2038 85 4 0 chr20 39160216 39160474 -32993408 - AluY SINE Alu -4 307 49 537 261 195 8 chr20 39160476 39160722 -32993160 + MLT1L LTR MaLR 244 613 -2 269 304 243 25 chr20 39160724 39160908 -32992974 + L2 LINE L2 2869 3012 -260 1966 131 3 67 chr20 39160908 39161237 -32992645 - AluJo SINE Alu -4 308 1 269 304 243 25 chr20 39161237 39161332 -32992550 + L2 LINE L2 3012 3209 -63 780 251 144 31 chr20 39161373 39161728 -32992154 - LTR33 LTR ERVL -4 517 123 371 200 0 0 chr20 39161728 39161793 -32992089 - Tigger5 DNA MER2_type 0 2323 2259 2017 144 0 13 chr20 39161805 39162110 -32991772 - AluSx SINE Alu -11 301 1 337 167 0 0 chr20 39162139 39162193 -32991689 - Tigger5 DNA MER2_type -2268 55 2 299 229 101 9 chr20 39162195 39162304 -32991578 - LTR33 LTR ERVL -398 123 5 382 327 89 54 chr20 39162522 39163798 -32990084 + L2 LINE L2 1631 3043 -229 876 252 151 62 chr20 39163940 39163995 -32989887 - MLT1H1 LTR MaLR -13 542 493 1864 185 3 3 chr20 39163995 39164303 -32989579 + AluJb SINE Alu 1 308 -4 876 252 151 62 chr20 39164303 39164766 -32989116 - MLT1H1 LTR MaLR -62 493 13 251 356 64 25 chr20 39165664 39165900 -32987982 + L2 LINE L2 2451 2695 -619 420 317 78 0 chr20 39166106 39166248 -32987634 - MIR SINE MIR -10 252 100 246 274 68 0 chr20 39166515 39166588 -32987294 + MLT1K LTR MaLR 507 584 -4 2264 112 7 7 chr20 39166630 39166935 -32986947 + AluSx SINE Alu 1 305 -7 899 210 18 0 chr20 39167376 39167543 -32986339 - FAM SINE Alu -5 170 1 241 282 91 0 chr20 39167697 39167807 -32986075 - MLT1L LTR MaLR 0 615 496 256 256 47 47 chr20 39167851 39167937 -32985945 - MLT1L LTR MaLR -221 394 309 1861 186 0 3 chr20 39167968 39168269 -32985613 - AluJb SINE Alu -12 300 1 277 228 40 30 chr20 39168598 39168699 -32985183 - HAL1b LINE L1 -500 848 747 21 36 0 0 chr20 39168980 39169008 -32984874 + AT_rich Low_complexity Low_complexity 1 28 0 337 347 6 0 chr20 39169183 39169359 -32984523 + L1MC4a LINE L1 4397 4573 -1573 521 264 122 29 chr20 39169675 39170501 -32983381 + L1MC4a LINE L1 4981 5887 -277 575 280 32 65 chr20 39170905 39171108 -32982774 + L1ME LINE L1 4381 4570 -1576 2236 120 0 0 chr20 39171108 39171407 -32982475 + AluSg SINE Alu 1 299 -11 575 280 32 65 chr20 39171407 39171542 -32982340 + L1ME LINE L1 4570 4708 -1438 195 42 0 0 chr20 39171808 39171832 -32982050 + (CA)n Simple_repeat Simple_repeat 1 24 0 755 267 102 22 chr20 39171839 39172538 -32981344 + L1ME LINE L1 5024 5789 -373 522 318 49 44 chr20 39173042 39173172 -32980710 + L1M4 LINE L1 4358 4486 -1660 207 0 0 0 chr20 39173172 39173195 -32980687 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 522 318 49 44 chr20 39173195 39173400 -32980482 + L1M4 LINE L1 4486 4698 -1448 2267 115 0 3 chr20 39173400 39173705 -32980177 + AluSx SINE Alu 1 304 -8 522 318 49 44 chr20 39173705 39173818 -32980064 + L1M4 LINE L1 4698 4809 -1337 334 254 63 21 chr20 39173860 39174002 -32979880 + L1M4 LINE L1 4905 5052 -1094 191 294 82 44 chr20 39174182 39174307 -32979575 + MIR SINE MIR 20 151 -57 425 321 158 50 chr20 39175185 39176235 -32977647 + L2 LINE L2 2053 3312 -1 839 331 111 4 chr20 39176419 39176914 -32976968 + L2 LINE L2 1862 2409 -905 830 196 0 0 chr20 39176958 39177101 -32976781 + FLAM_C SINE Alu 1 143 0 272 268 83 91 chr20 39178080 39178476 -32975406 + L2 LINE L2 1797 2189 -1125 999 324 143 26 chr20 39178751 39179634 -32974248 + L2 LINE L2 1860 2845 -469 378 0 0 0 chr20 39179917 39179959 -32973923 + (TG)n Simple_repeat Simple_repeat 2 43 0 784 197 0 0 chr20 39179961 39180083 -32973799 - FLAM_C SINE Alu -20 123 2 209 260 80 0 chr20 39180096 39180146 -32973736 + L2 LINE L2 3255 3308 -5 563 260 68 43 chr20 39180191 39180495 -32973387 - L1MC/D LINE L1 -549 5572 5259 565 221 41 0 chr20 39181353 39181475 -32972407 - MIR3 SINE MIR -17 191 65 201 74 0 0 chr20 39181824 39181851 -32972031 + (A)n Simple_repeat Simple_repeat 1 27 0 2240 113 3 3 chr20 39181991 39182293 -32971589 - AluSx SINE Alu -8 304 3 210 344 149 18 chr20 39182870 39183091 -32970791 + MIR SINE MIR 8 257 -5 214 267 37 52 chr20 39184292 39184423 -32969459 + MIR SINE MIR 14 143 -67 295 252 81 49 chr20 39185248 39185371 -32968511 - MIR3 SINE MIR -11 197 71 225 316 138 53 chr20 39187234 39187459 -32966423 + L2 LINE L2 2974 3217 -55 205 234 117 99 chr20 39188361 39188472 -32965410 + L2 LINE L2 3116 3228 -44 355 343 64 17 chr20 39188533 39188705 -32965177 + L1M4 LINE L1 3087 3266 -2880 191 88 29 0 chr20 39191427 39191461 -32962421 + (CAGA)n Simple_repeat Simple_repeat 4 38 0 294 29 0 0 chr20 39191461 39191496 -32962386 + (A)n Simple_repeat Simple_repeat 1 35 0 304 278 92 92 chr20 39193933 39194271 -32959611 + L1M2 LINE L1 1733 2070 -4779 248 203 0 78 chr20 39195598 39195662 -32958220 + L2 LINE L2 3121 3179 -93 228 366 27 27 chr20 39196845 39196957 -32956925 + MIR SINE MIR 18 129 -79 226 175 0 48 chr20 39199866 39199929 -32953953 + (CCG)n Simple_repeat Simple_repeat 3 62 0 292 305 113 82 chr20 39200539 39200893 -32952989 - L2 LINE L2 -2 3311 2947 1078 250 249 20 chr20 39200957 39201641 -32952241 - L2 LINE L2 -516 2798 1959 238 250 259 0 chr20 39201758 39201870 -32952012 - MLT1L LTR MaLR -128 487 347 2040 242 60 13 chr20 39202796 39203395 -32950487 + L1ME3 LINE L1 5476 6102 -60 615 191 0 0 chr20 39203412 39203517 -32950365 + AluSg/x SINE Alu 204 308 -1 2408 110 0 0 chr20 39203574 39203883 -32949999 + AluSg SINE Alu 1 309 -1 373 246 140 68 chr20 39204264 39204481 -32949401 + L2 LINE L2 2443 2643 -629 2162 120 7 3 chr20 39204481 39204781 -32949101 - AluSx SINE Alu -11 301 1 373 246 140 68 chr20 39204781 39204912 -32948970 + L2 LINE L2 2643 3047 -225 381 238 0 0 chr20 39204914 39204994 -32948888 - L2 LINE L2 -3 3310 3231 1944 122 0 86 chr20 39204995 39205322 -32948560 + AluJb SINE Alu 1 299 -13 184 152 0 109 chr20 39205401 39205447 -32948435 + L2 LINE L2 3137 3177 -95 748 249 37 5 chr20 39205896 39206085 -32947797 + MIR SINE MIR 24 218 -44 2364 102 0 0 chr20 39206094 39206388 -32947494 + AluSq SINE Alu 1 294 -19 244 312 71 18 chr20 39206810 39206980 -32946902 + L2 LINE L2 2493 2671 -643 448 313 69 42 chr20 39206992 39207048 -32946834 - L2 LINE L2 -553 2761 2708 2256 83 0 33 chr20 39207048 39207350 -32946532 - AluSq SINE Alu -21 292 1 448 313 69 42 chr20 39207350 39207555 -32946327 - L2 LINE L2 -606 2708 2493 4106 130 29 24 chr20 39207560 39208135 -32945747 + MER50 LTR ERV1 7 587 -147 5145 75 38 0 chr20 39208135 39208801 -32945081 + LTR8 LTR ERV1 1 691 0 4106 130 29 24 chr20 39208801 39208927 -32944955 + MER50 LTR ERV1 587 711 -23 342 261 113 0 chr20 39209106 39209221 -32944661 - L2 LINE L2 -836 2478 2351 831 289 64 20 chr20 39209747 39210093 -32943789 + L2 LINE L2 2904 3264 -49 725 229 18 6 chr20 39210098 39210264 -32943618 - MLT1I LTR MaLR -12 397 230 305 219 16 0 chr20 39210468 39210532 -32943350 - MIR SINE MIR -136 126 62 1966 145 137 11 chr20 39210533 39210913 -32942969 + MSTA LTR MaLR 1 428 0 261 231 0 19 chr20 39210917 39210969 -32942913 + MIR SINE MIR 18 68 -194 578 103 77 17 chr20 39210990 39211107 -32942775 + L1MC4 LINE L1 7006 7129 -913 1860 200 145 17 chr20 39211111 39211641 -32942241 + L1MC4 LINE L1 7297 7894 -148 423 68 0 0 chr20 39211644 39211703 -32942179 + (TCTA)n Simple_repeat Simple_repeat 3 61 0 1317 96 11 0 chr20 39211706 39211894 -32941988 - MER4E LTR ERV1 -4 762 573 21 57 0 0 chr20 39211894 39211929 -32941953 + AT_rich Low_complexity Low_complexity 1 35 0 1828 136 84 75 chr20 39212005 39212432 -32941450 - MER4B LTR ERV1 -179 431 1 539 207 8 17 chr20 39212434 39212592 -32941290 + L1MC4 LINE L1 6241 6358 -1 2196 128 3 13 chr20 39212747 39213060 -32940822 + AluSx SINE Alu 1 310 -2 431 269 77 32 chr20 39213095 39213251 -32940631 + MIR SINE MIR 94 256 -6 605 218 6 32 chr20 39213251 39213407 -32940475 + L1MA10 LINE L1 6170 6321 -13 2236 123 3 3 chr20 39213654 39213962 -32939920 + AluSx SINE Alu 1 308 -4 1048 159 39 10 chr20 39214005 39214213 -32939669 + L1ME2 LINE L1 5847 6060 -104 604 156 125 0 chr20 39214234 39214362 -32939520 - LTR47A LTR ERVL -44 408 265 370 225 25 0 chr20 39214638 39214718 -32939164 + L1ME2 LINE L1 6068 6149 -15 2200 110 0 0 chr20 39214759 39215070 -32938812 + AluSx SINE Alu 1 311 0 348 197 54 84 chr20 39215081 39215147 -32938735 + L1MC4 LINE L1 7837 7903 -139 1398 194 44 27 chr20 39215147 39215441 -32938441 + AluJo SINE Alu 1 299 -13 348 197 54 84 chr20 39215441 39215577 -32938305 + L1MC4 LINE L1 7903 8033 -9 457 335 174 0 chr20 39215925 39216080 -32937802 - MER91A DNA MER1_type -7 189 8 593 314 21 0 chr20 39216809 39216997 -32936885 + MIR SINE MIR 52 243 -19 1704 244 71 16 chr20 39217444 39217882 -32936000 + L2 LINE L2 2262 2723 -591 719 180 167 0 chr20 39217882 39218032 -32935850 + AluJb SINE Alu 130 304 -8 1213 239 96 83 chr20 39218033 39218291 -32935591 + L2 LINE L2 2713 2966 -347 2361 90 0 3 chr20 39218291 39218591 -32935291 - AluSg SINE Alu -11 299 1 1213 239 96 83 chr20 39218591 39218771 -32935111 + L2 LINE L2 2966 3158 -155 1886 160 3 0 chr20 39218771 39219079 -32934803 - AluJb SINE Alu 0 309 1 1213 239 96 83 chr20 39219079 39219229 -32934653 + L2 LINE L2 3158 3305 -8 2296 169 65 18 chr20 39219232 39219888 -32933994 - MER21A LTR ERV1 -132 799 1 679 276 23 0 chr20 39219900 39220114 -32933768 + L1M4 LINE L1 4465 4683 -1463 261 186 0 6 chr20 39220117 39220176 -32933706 + AluSg/x SINE Alu 118 171 -131 435 179 11 0 chr20 39220185 39220280 -32933602 - L1MEc LINE L1 -4663 2459 2364 * 8132 133 19 48 chr20 39220269 39220878 -32933004 - L1MA4 LINE L1 -1 6299 5673 2757 42 0 0 chr20 39220878 39221189 -32932693 + AluY SINE Alu 1 311 0 8132 133 19 48 chr20 39221189 39221269 -32932613 - L1MA4 LINE L1 -627 5673 5592 2142 125 0 58 chr20 39221269 39221598 -32932284 - AluSg SINE Alu 0 310 1 8132 133 19 48 chr20 39221598 39222188 -32931694 - L1MA4 LINE L1 -708 5592 4986 4901 69 3 18 chr20 39222188 39222809 -32931073 - SVA Other Other 0 1386 775 8132 133 19 48 chr20 39222809 39223217 -32930665 - L1MA4 LINE L1 -1314 4986 4567 2314 113 3 0 chr20 39223217 39223518 -32930364 - AluSp SINE Alu -11 302 1 8132 133 19 48 chr20 39223518 39223744 -32930138 - L1MA4 LINE L1 -1733 4567 4336 1926 142 0 24 chr20 39223744 39224039 -32929843 - AluJb SINE Alu -4 308 21 8132 133 19 48 chr20 39224039 39225246 -32928636 - L1MA4 LINE L1 -1964 4336 3246 2457 165 11 9 chr20 39225245 39225416 -32928466 + L1M4 LINE L1 2873 3042 -3104 * 1948 181 0 10 chr20 39225416 39225725 -32928157 + AluJb SINE Alu 1 306 -6 2457 165 11 9 chr20 39225725 39226092 -32927790 + L1M4 LINE L1 3042 3412 -2734 1000 208 9 0 chr20 39226090 39226311 -32927571 - L1MA4 LINE L1 -3272 2874 2652 * 1020 122 32 154 chr20 39226323 39226544 -32927338 + MER70B LTR ERVL 279 476 0 4421 126 20 4 chr20 39226624 39227313 -32926569 + MER50 LTR ERV1 7 706 -28 450 177 14 113 chr20 39227319 39227421 -32926461 - L1MEc LINE L1 -6278 145 59 2195 121 0 0 chr20 39227421 39227718 -32926164 - AluSx SINE Alu -15 297 1 450 177 14 113 chr20 39227718 39227756 -32926126 - L1MEc LINE L1 -6364 59 19 1024 243 33 7 chr20 39227793 39228098 -32925784 + L1M4 LINE L1 4325 4637 -1509 564 115 90 8 chr20 39228098 39228220 -32925662 + L1MB7 LINE L1 6053 6184 0 2082 143 3 0 chr20 39228226 39228526 -32925356 + AluSx SINE Alu 1 301 -11 254 239 65 0 chr20 39228570 39228662 -32925220 - MER96 DNA MER1_type? -77 98 1 940 272 102 42 chr20 39228847 39229296 -32924586 + L2 LINE L2 2838 3313 0 190 320 10 99 chr20 39229291 39229603 -32924279 - L2 LINE L2 -76 3196 2913 * 390 151 0 0 chr20 39229615 39229688 -32924194 + (TG)n Simple_repeat Simple_repeat 2 74 0 2079 136 10 7 chr20 39229756 39230065 -32923817 + AluJb SINE Alu 1 310 -2 888 159 0 0 chr20 39230194 39230326 -32923556 - FLAM_C SINE Alu 0 133 2 372 118 0 35 chr20 39230373 39230458 -32923424 - MER113 DNA MER1_type? -376 145 64 932 244 137 16 chr20 39230946 39231311 -32922571 + LTR16C LTR ERVL 83 491 0 3754 136 47 0 chr20 39231524 39232021 -32921861 + MER41B LTR ERV1 2 533 -102 2053 130 20 3 chr20 39232021 39232321 -32921561 - AluSx SINE Alu -2 310 6 3754 136 47 0 chr20 39232321 39232421 -32921461 + MER41B LTR ERV1 533 627 -8 613 251 62 22 chr20 39232477 39232656 -32921226 + L2 LINE L2 2921 3106 -207 529 210 95 2 chr20 39232673 39232816 -32921066 - L1ME1 LINE L1 0 6334 6024 2102 94 106 44 chr20 39232844 39233051 -32920831 + MER41C LTR ERV1 1 241 -313 2461 77 3 7 chr20 39233051 39233361 -32920521 - AluSg SINE Alu -1 309 1 2102 94 106 44 chr20 39233361 39233513 -32920369 + MER41C LTR ERV1 241 382 -172 1750 94 0 0 chr20 39233519 39233743 -32920139 - AluSg/x SINE Alu -8 302 79 874 98 0 0 chr20 39233743 39233866 -32920016 + MER41B LTR ERV1 513 635 0 1548 179 13 88 chr20 39233867 39234151 -32919731 - L1ME1 LINE L1 -179 5985 5681 2219 97 0 4 chr20 39234151 39234455 -32919427 + AluSg SINE Alu 2 304 0 1548 179 13 88 chr20 39234455 39234497 -32919385 - L1ME1 LINE L1 -483 5681 5688 4080 93 22 0 chr20 39234497 39235035 -32918847 - MER41A LTR ERV1 0 554 5 1548 179 13 88 chr20 39235035 39235102 -32918780 - L1ME1 LINE L1 -475 5689 5619 222 284 157 29 chr20 39235146 39235248 -32918634 + L2 LINE L2 3157 3271 -1 3432 142 53 33 chr20 39235541 39236224 -32917658 + LTR8A LTR ERV1 1 691 0 258 219 179 41 chr20 39236273 39236396 -32917486 - MER115 DNA AcHobo -257 436 297 186 189 27 0 chr20 39236908 39236945 -32916937 + L3 LINE CR1 1514 1551 -26 555 316 54 30 chr20 39237376 39237876 -32916006 - L2 LINE L2 -45 3268 2527 2256 131 0 0 chr20 39237884 39238196 -32915686 + AluSx SINE Alu 1 312 0 255 250 69 95 chr20 39238370 39238486 -32915396 + MER5A DNA MER1_type 3 115 -74 401 228 13 0 chr20 39239213 39239292 -32914590 - MIR SINE MIR -114 148 69 246 331 31 55 chr20 39240190 39240317 -32913565 + MIR3 SINE MIR 37 160 -48 687 244 77 12 chr20 39240570 39240738 -32913144 + L3 LINE CR1 1388 1566 -11 2670 112 2 19 chr20 39240743 39241161 -32912721 - L1PA13 LINE L1 -7 6156 5746 1967 167 10 0 chr20 39241431 39241736 -32912146 - AluJb SINE Alu -4 308 1 867 106 0 38 chr20 39241836 39241858 -32912024 - AluSg/x SINE Alu -11 299 278 1262 148 30 4 chr20 39241858 39242094 -32911788 - L1MA3 LINE L1 0 6305 6064 867 106 0 38 chr20 39242094 39242203 -32911679 - AluSg/x SINE Alu -32 278 173 1672 140 0 7 chr20 39242203 39242489 -32911393 - L1MA3 LINE L1 -241 6064 5781 377 266 0 0 chr20 39242974 39243053 -32910829 + MER63 DNA MER1_type 673 751 -85 285 268 0 14 chr20 39243054 39243125 -32910757 + MER63 DNA MER1_type 979 1048 -14 2224 107 10 7 chr20 39243446 39243746 -32910136 - AluSx SINE Alu -11 301 1 275 302 0 0 chr20 39243787 39243862 -32910020 - MIR SINE MIR -63 145 79 187 297 16 16 chr20 39243878 39243942 -32909940 - MIR SINE MIR -1 261 198 791 223 121 19 chr20 39243944 39244200 -32909682 - LTR16A1 LTR ERVL -3 454 173 2405 96 7 0 chr20 39244254 39244289 -32909593 - AluSx SINE Alu 0 542 509 1091 81 5 32 chr20 39244289 39244474 -32909408 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 2405 96 7 0 chr20 39244474 39244794 -32909088 - AluSx SINE Alu -33 509 1 706 204 29 0 chr20 39244859 39244996 -32908886 - MIR SINE MIR -62 200 60 2226 125 0 0 chr20 39245177 39245466 -32908416 + AluSx SINE Alu 1 289 -23 426 248 0 29 chr20 39245583 39245688 -32908194 + MIR SINE MIR 109 210 -52 223 309 9 9 chr20 39246087 39246197 -32907685 + (TG)n Simple_repeat Simple_repeat 1 110 0 2076 120 7 3 chr20 39247298 39247607 -32906275 - AluSq SINE Alu 0 310 1 2129 119 28 0 chr20 39248401 39248687 -32905195 - AluSx SINE Alu -12 300 7 352 282 164 64 chr20 39248699 39249029 -32904853 + L2 LINE L2 2894 3256 -16 274 218 30 89 chr20 39249322 39249423 -32904459 + MIR SINE MIR 53 141 -67 3292 87 12 37 chr20 39249686 39250171 -32903711 + MER1A DNA MER1_type 57 529 0 379 221 0 0 chr20 39250171 39250239 -32903643 - L2 LINE L2 -21 3292 3225 325 237 140 0 chr20 39250274 39250367 -32903515 - L2 LINE L2 0 3313 3208 268 315 11 22 chr20 39250470 39250562 -32903320 - MIR SINE MIR -152 110 20 2142 112 14 14 chr20 39250613 39250907 -32902975 - AluSx SINE Alu -18 294 1 2248 132 0 0 chr20 39251593 39251897 -32901985 - AluSx SINE Alu -8 304 1 536 245 167 31 chr20 39252186 39252378 -32901504 - MIR SINE MIR -29 233 16 1708 142 59 7 chr20 39252725 39253013 -32900869 + AluJb SINE Alu 1 303 -9 222 227 45 15 chr20 39253589 39253655 -32900227 + MIR SINE MIR 78 145 -63 202 230 135 81 chr20 39254302 39254450 -32899432 + L2 LINE L2 376 531 -2783 1314 139 72 0 chr20 39254523 39254732 -32899150 + AluSg/x SINE Alu 89 312 0 2557 150 28 6 chr20 39254742 39255208 -32898674 - MER31A LTR ERV1 -6 479 4 224 0 65 0 chr20 39255231 39255262 -32898620 + (TAAAAA)n Simple_repeat Simple_repeat 2 34 0 2283 117 0 28 chr20 39255304 39255621 -32898261 - AluSx SINE Alu -4 308 1 203 227 30 0 chr20 39255716 39255782 -32898100 + (TA)n Simple_repeat Simple_repeat 1 68 0 347 308 19 6 chr20 39255785 39255944 -32897938 - L1ME3A LINE L1 -230 5940 5780 882 209 94 17 chr20 39255963 39256197 -32897685 + L1ME LINE L1 5522 5773 -389 682 211 58 0 chr20 39257459 39257630 -32896252 + L1M4 LINE L1 16 196 -6346 850 196 13 13 chr20 39257631 39257789 -32896093 - AluJb SINE Alu -12 300 143 673 205 12 53 chr20 39257831 39258002 -32895880 + MER21B LTR ERV1 1 164 -699 2131 269 37 32 chr20 39258013 39258983 -32894899 + L1M4 LINE L1 1461 2555 -4270 2320 116 3 0 chr20 39258983 39259285 -32894597 + AluSq SINE Alu 1 303 -10 2131 269 37 32 chr20 39259285 39259408 -32894474 + L1M4 LINE L1 2555 2676 -4149 3076 243 15 14 chr20 39259412 39260290 -32893592 + L1M4 LINE L1 2776 3654 -2990 3720 162 62 7 chr20 39260292 39260988 -32892894 + L1MB7 LINE L1 5443 6176 -8 2275 116 3 3 chr20 39261087 39261397 -32892485 - AluSx SINE Alu -2 310 1 308 238 197 7 chr20 39261405 39261552 -32892330 - MER104 DNA Tc2 -2 178 4 1548 149 24 98 chr20 39261771 39262107 -32891775 + AluYb8 SINE Alu 1 311 -7 2093 138 0 10 chr20 39262521 39262825 -32891057 - AluJb SINE Alu -11 301 1 467 241 17 17 chr20 39264074 39264190 -32889692 + MIR SINE MIR 31 146 -62 453 265 0 10 chr20 39264415 39264517 -32889365 + MIR SINE MIR 83 183 -79 280 200 17 17 chr20 39264589 39264649 -32889233 + MIR SINE MIR 184 243 -19 628 282 110 31 chr20 39264929 39265156 -32888726 - MIR SINE MIR -5 257 13 604 325 60 5 chr20 39265224 39265424 -32888458 - MIR SINE MIR -32 230 20 182 182 0 68 chr20 39265436 39265480 -32888402 - L2 LINE L2 -401 2913 2873 189 385 103 0 chr20 39265562 39265718 -32888164 - L2 LINE L2 -556 2758 2587 2348 102 0 13 chr20 39266395 39266710 -32887172 - AluSx SINE Alu -1 311 1 550 282 8 0 chr20 39266753 39266877 -32887005 - FLAM_A SINE Alu -8 125 1 714 239 42 46 chr20 39267037 39267101 -32886781 - L1ME3 LINE L1 -2 6160 6097 2129 100 13 39 chr20 39267101 39267410 -32886472 - AluSx SINE Alu -11 301 1 714 239 42 46 chr20 39267410 39267608 -32886274 - L1ME3 LINE L1 -65 6097 5899 1868 171 14 0 chr20 39267843 39268129 -32885753 + AluJb SINE Alu 1 290 -22 807 228 246 21 chr20 39268136 39268474 -32885408 - MLT1K LTR MaLR -10 578 165 1644 116 86 73 chr20 39268634 39268936 -32884946 + AluJo SINE Alu 1 306 -6 2495 177 18 46 chr20 39269233 39269729 -32884153 + MER66B LTR ERV1 5 486 0 217 256 26 90 chr20 39269940 39270018 -32883864 - L2 LINE L2 -74 3198 3126 189 74 0 0 chr20 39270696 39270723 -32883159 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 434 314 92 28 chr20 39270723 39270999 -32882883 - L2 LINE L2 -10 3262 2966 235 314 182 25 chr20 39271381 39271502 -32882380 + MIR3 SINE MIR 6 145 -63 294 170 0 0 chr20 39271555 39271608 -32882274 + MER74B LTR ERVL 1 53 -569 196 40 0 0 chr20 39271623 39271648 -32882234 - MIR SINE MIR -225 37 13 1834 182 0 0 chr20 39271667 39271953 -32881929 + AluJb SINE Alu 1 286 -26 306 0 0 0 chr20 39271953 39271987 -32881895 + (CAAAT)n Simple_repeat Simple_repeat 2 35 0 944 200 132 11 chr20 39272001 39272266 -32881616 + MER74B LTR ERVL 259 555 -67 257 268 92 37 chr20 39272969 39273133 -32880749 + LTR33A LTR ERVL 351 523 0 244 198 142 47 chr20 39273192 39273298 -32880584 + L3 LINE CR1 975 1090 -487 3061 102 12 19 chr20 39273367 39273798 -32880084 + MSTC LTR MaLR 1 428 0 313 277 12 0 chr20 39273814 39273897 -32879985 + L2 LINE L2 2592 2675 -639 997 118 0 9 chr20 39275313 39275539 -32878343 + (TTCC)n Simple_repeat Simple_repeat 1 223 0 1917 154 35 0 chr20 39275539 39275825 -32878057 - AluJo SINE Alu -16 296 1 431 313 0 0 chr20 39276082 39276194 -32877688 - L2 LINE L2 -1 3312 3201 385 239 56 169 chr20 39276191 39276547 -32877335 + L2 LINE L2 2920 3235 -37 * 204 40 0 0 chr20 39276555 39276580 -32877302 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 502 310 19 46 chr20 39276815 39276913 -32876969 + MIR SINE MIR 53 152 -110 1858 171 49 25 chr20 39276913 39277240 -32876642 + MER1B DNA MER1_type 3 337 0 502 310 19 46 chr20 39277240 39277357 -32876525 + MIR SINE MIR 152 262 0 1594 159 12 0 chr20 39277842 39278087 -32875795 + AluJo SINE Alu 2 249 -63 469 268 76 13 chr20 39278261 39278319 -32875563 - L1MC4a LINE L1 -1911 5897 5844 2042 130 0 3 chr20 39278319 39278624 -32875258 - AluSx SINE Alu 0 304 1 469 268 76 13 chr20 39278624 39278720 -32875162 - L1MC4a LINE L1 -1964 5844 5731 287 298 12 0 chr20 39278729 39278813 -32875069 - L1MC4a LINE L1 -2154 5654 5570 2086 142 0 0 chr20 39278897 39279192 -32874690 - AluSx SINE Alu -17 295 1 260 167 19 19 chr20 39279380 39279434 -32874448 + LTR16A1 LTR ERVL 259 312 -145 1064 216 94 95 chr20 39279441 39279578 -32874304 + MLT1F1 LTR MaLR 1 137 -430 2388 81 14 0 chr20 39279578 39279874 -32874008 + AluSq SINE Alu 1 300 -13 1064 216 94 95 chr20 39279874 39279961 -32873921 + MLT1F1 LTR MaLR 137 223 -344 707 57 0 19 chr20 39279961 39280067 -32873815 + (ATATG)n Simple_repeat Simple_repeat 3 106 0 1064 216 94 95 chr20 39280067 39280184 -32873698 + MLT1F1 LTR MaLR 223 339 -228 2056 142 0 0 chr20 39280184 39280472 -32873410 - AluSx SINE Alu -24 288 1 1064 216 94 95 chr20 39280472 39280664 -32873218 + MLT1F1 LTR MaLR 339 567 0 374 197 59 92 chr20 39280664 39280735 -32873147 + LTR16A1 LTR ERVL 321 386 -71 2254 76 28 14 chr20 39280735 39281026 -32872856 - AluSq SINE Alu -18 295 1 374 197 59 92 chr20 39281026 39281096 -32872786 + LTR16A1 LTR ERVL 386 457 0 1898 154 171 11 chr20 39281779 39282148 -32871734 - MSTA LTR MaLR 0 428 1 436 262 227 0 chr20 39282320 39282461 -32871421 - MIR SINE MIR -29 233 61 838 231 187 3 chr20 39282534 39282855 -32871027 + LTR16C LTR ERVL 103 482 -9 1982 99 67 18 chr20 39283032 39283315 -32870567 - AluSx SINE Alu -15 297 1 409 318 47 27 chr20 39283797 39283945 -32869937 + L2 LINE L2 3122 3272 0 623 226 48 43 chr20 39284009 39284217 -32869665 - MLT1K LTR MaLR -13 575 367 247 236 0 56 chr20 39284286 39284358 -32869524 + MIR3 SINE MIR 110 177 -31 526 284 8 8 chr20 39284372 39284499 -32869383 - MIR3 SINE MIR -38 170 44 506 250 91 11 chr20 39284677 39284853 -32869029 + MIR SINE MIR 39 228 -34 1727 191 0 0 chr20 39284940 39285253 -32868629 + AluJb SINE Alu 1 313 0 3012 113 7 5 chr20 39285311 39285737 -32868145 + MSTA LTR MaLR 2 428 0 293 291 17 60 chr20 39286017 39286134 -32867748 - MIR3 SINE MIR -15 193 82 194 175 250 50 chr20 39286272 39286352 -32867530 + MIR SINE MIR 52 147 -61 249 125 0 0 chr20 39286507 39286555 -32867327 + MER113 DNA MER1_type? 61 108 -413 225 0 0 0 chr20 39286603 39286628 -32867254 + (TA)n Simple_repeat Simple_repeat 2 26 0 2273 118 0 0 chr20 39286628 39286932 -32866950 - AluSx SINE Alu -8 304 1 212 389 0 0 chr20 39287099 39287189 -32866693 - MIR SINE MIR -81 127 38 294 301 155 35 chr20 39287231 39287457 -32866425 + L2 LINE L2 2909 3161 -111 239 302 47 0 chr20 39288191 39288277 -32865605 - MIR SINE MIR -53 209 120 1253 270 146 11 chr20 39288282 39288777 -32865105 - L2 LINE L2 -4 3309 2742 836 119 10 98 chr20 39288789 39288816 -32865066 + MER53 DNA DNA 11 39 -150 1654 203 39 0 chr20 39288816 39289102 -32864780 + AluJb SINE Alu 1 297 -15 836 119 10 98 chr20 39289102 39289267 -32864615 + MER53 DNA DNA 39 186 -3 1600 249 39 25 chr20 39289272 39289714 -32864168 - L2 LINE L2 -565 2749 2302 689 139 148 66 chr20 39289728 39289977 -32863905 + MLT1C LTR MaLR 4 270 -173 205 257 27 27 chr20 39289999 39290073 -32863809 - L2 LINE L2 -1032 2282 2209 25 0 0 0 chr20 39290073 39290098 -32863784 + AT_rich Low_complexity Low_complexity 1 25 0 2214 110 3 3 chr20 39290098 39290389 -32863493 - AluSx SINE Alu -21 291 1 1294 258 61 3 chr20 39290395 39290763 -32863119 - L2 LINE L2 -1099 2215 1823 1700 167 4 0 chr20 39290763 39291026 -32862856 + AluJb SINE Alu 42 305 -7 298 266 13 13 chr20 39291033 39291112 -32862770 + CT-rich Low_complexity Low_complexity 6 84 0 481 284 189 41 chr20 39291387 39291806 -32862076 - L2 LINE L2 0 3313 2833 797 154 8 8 chr20 39291809 39291932 -32861950 + FLAM_C SINE Alu 2 124 -19 674 316 107 42 chr20 39291941 39292088 -32861794 - L2 LINE L2 -470 2844 2708 2767 113 16 0 chr20 39292088 39292513 -32861369 - L1MA5A LINE L1 -2 6295 5864 674 316 107 42 chr20 39292513 39292909 -32860973 - L2 LINE L2 -606 2708 2266 308 271 102 57 chr20 39293018 39293262 -32860620 - L2 LINE L2 -205 3067 2813 1207 172 48 31 chr20 39293379 39293606 -32860276 - AluJb SINE Alu -81 231 1 207 0 0 0 chr20 39293637 39293660 -32860222 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2258 92 28 0 chr20 39293662 39293944 -32859938 - AluSg SINE Alu -20 290 1 249 295 66 59 chr20 39293994 39294151 -32859731 + MIR SINE MIR 6 167 -63 201 241 0 0 chr20 39294153 39294207 -32859675 + CT-rich Low_complexity Low_complexity 3 56 0 444 307 186 35 chr20 39294207 39294631 -32859251 - L2 LINE L2 -1 3312 2825 293 267 118 41 chr20 39294934 39295129 -32858753 + MLT1H LTR MaLR 132 341 -208 571 291 86 22 chr20 39295453 39295731 -32858151 + L2 LINE L2 2715 3004 -268 691 249 111 0 chr20 39295765 39295954 -32857928 - MIR SINE MIR -8 254 45 747 302 0 5 chr20 39296091 39296280 -32857602 - MIR SINE MIR -33 229 42 290 297 9 9 chr20 39296851 39296962 -32856920 + CT-rich Low_complexity Low_complexity 2 112 0 243 330 32 0 chr20 39297023 39297117 -32856765 + MIR SINE MIR 79 175 -87 223 309 32 11 chr20 39297413 39297507 -32856375 + L3b LINE CR1 1300 1395 -188 250 349 128 0 chr20 39297545 39297654 -32856228 + L2 LINE L2 3148 3270 -2 195 237 0 0 chr20 39298130 39298168 -32855714 + MIR SINE MIR 31 68 -140 1478 289 34 2 chr20 39298241 39298649 -32855233 - LTR16A LTR ERVL -5 445 25 187 299 214 19 chr20 39298685 39298839 -32855043 - MIR SINE MIR -65 197 14 239 329 85 0 chr20 39298901 39298983 -32854899 + MIR3 SINE MIR 88 176 -32 227 208 42 0 chr20 39299136 39299184 -32854698 + MIR3 SINE MIR 152 201 -7 288 339 92 49 chr20 39300270 39300639 -32853243 + L2 LINE L2 2437 2821 -493 337 277 34 47 chr20 39300692 39300840 -32853042 + L2 LINE L2 2914 3059 -213 616 258 126 20 chr20 39300933 39301131 -32852751 + MIR SINE MIR 38 256 -6 1307 231 82 41 chr20 39301185 39301622 -32852260 - LTR16A1 LTR ERVL 0 457 3 499 331 59 66 chr20 39301729 39302034 -32851848 - L2 LINE L2 0 3272 2970 194 271 250 42 chr20 39302567 39302711 -32851171 + MIR3 SINE MIR 23 196 -12 343 327 25 19 chr20 39303197 39303359 -32850523 - MIR SINE MIR -98 164 2 546 240 200 20 chr20 39303446 39303646 -32850236 + MIR SINE MIR 20 255 -7 796 200 0 89 chr20 39304272 39304497 -32849385 + L2 LINE L2 3089 3293 -20 282 256 143 23 chr20 39304715 39304848 -32849034 + MIR SINE MIR 74 222 -40 342 0 0 0 chr20 39305124 39305162 -32848720 + (TG)n Simple_repeat Simple_repeat 1 38 0 442 225 33 86 chr20 39305627 39305778 -32848104 + MIR3 SINE MIR 50 192 -16 340 238 0 0 chr20 39306016 39306079 -32847803 - MIR SINE MIR -119 143 81 208 278 204 9 chr20 39306340 39306448 -32847434 - MIR SINE MIR -61 147 19 183 277 0 0 chr20 39306740 39306787 -32847095 - MIR3 SINE MIR -38 170 124 228 353 61 0 chr20 39306860 39306959 -32846923 - MIR SINE MIR -65 143 47 671 273 31 5 chr20 39306966 39307160 -32846722 + MLT1A2 LTR MaLR 171 369 -5 576 118 0 0 chr20 39307169 39307254 -32846628 + L1MD1 LINE L1 6090 6174 -68 386 236 0 22 chr20 39307255 39307344 -32846538 + MIR SINE MIR 58 144 -64 431 248 33 84 chr20 39307370 39307644 -32846238 + L1M4 LINE L1 2927 3186 -2960 615 306 115 54 chr20 39307678 39307992 -32845890 - L2 LINE L2 -2 3270 2938 589 289 14 0 chr20 39308060 39308202 -32845680 - MIR SINE MIR -81 181 38 237 251 47 94 chr20 39309464 39309635 -32844247 + L2 LINE L2 2902 3064 -208 2487 62 0 0 chr20 39309639 39309965 -32843917 - AluY SINE Alu 0 326 1 1871 168 17 0 chr20 39309973 39310270 -32843612 - AluJb SINE Alu -10 302 1 452 257 105 35 chr20 39310309 39310480 -32843402 + MIR SINE MIR 1 183 -79 435 331 12 24 chr20 39310663 39310832 -32843050 + MIR3 SINE MIR 17 183 -25 367 241 36 36 chr20 39310931 39311043 -32842839 + MIR SINE MIR 80 191 -71 500 272 27 54 chr20 39311060 39311244 -32842638 - L2 LINE L2 -18 3295 3117 1443 174 17 55 chr20 39311247 39311570 -32842312 + AluJb SINE Alu 1 312 0 219 222 22 0 chr20 39311600 39311645 -32842237 - L2 LINE L2 -217 3055 3010 632 230 62 11 chr20 39311645 39311823 -32842059 - MLT1F1 LTR MaLR 0 567 381 593 301 52 48 chr20 39311866 39312175 -32841707 - MLT1F1 LTR MaLR -285 310 1 288 243 99 36 chr20 39312175 39312286 -32841596 - L2 LINE L2 -258 3014 2897 * 768 235 88 137 chr20 39312263 39313139 -32840743 - L2 LINE L2 -37 3276 2442 234 274 0 0 chr20 39313160 39313211 -32840671 - MIR SINE MIR -89 119 69 809 243 60 48 chr20 39313732 39313983 -32839899 + MIR SINE MIR 2 255 -7 662 130 0 8 chr20 39314342 39314465 -32839417 + (TCCA)n Simple_repeat Simple_repeat 3 124 0 452 171 9 0 chr20 39314517 39314628 -32839254 + (TCCA)n Simple_repeat Simple_repeat 4 115 0 213 366 56 56 chr20 39314730 39314891 -32838991 - L2 LINE L2 0 3272 3112 204 330 21 21 chr20 39315184 39315278 -32838604 - L3 LINE CR1 -65 1512 1419 674 272 27 16 chr20 39315388 39315572 -32838310 + MIR SINE MIR 16 201 -61 593 210 67 76 chr20 39315834 39315866 -32838016 - LTR33A LTR ERVL -170 353 322 1895 127 28 3 chr20 39315866 39316150 -32837732 - AluJb SINE Alu -21 291 1 593 210 67 76 chr20 39316150 39316341 -32837541 - LTR33A LTR ERVL -201 322 132 281 276 0 0 chr20 39316598 39316656 -32837226 + MIR SINE MIR 119 176 -86 336 291 0 0 chr20 39316693 39316772 -32837110 - L2 LINE L2 -47 3225 3147 368 172 0 0 chr20 39316782 39316846 -32837036 + MIR SINE MIR 187 250 -12 284 219 164 0 chr20 39316852 39316925 -32836957 - MER103 DNA DNA -79 87 3 267 197 66 53 chr20 39317237 39317313 -32836569 - L2 LINE L2 0 3272 3196 304 294 98 10 chr20 39317361 39317463 -32836419 - L2 LINE L2 -186 3086 2976 519 293 26 16 chr20 39317602 39317793 -32836089 + MIR SINE MIR 20 212 -50 372 232 0 23 chr20 39318284 39318381 -32835501 + MIR SINE MIR 63 157 -51 938 241 38 44 chr20 39318500 39318837 -32835045 - MLT1I LTR MaLR -23 386 82 1972 114 0 4 chr20 39318922 39319184 -32834698 + AluSx SINE Alu 21 281 -31 2121 151 0 0 chr20 39319191 39319490 -32834392 + AluSx SINE Alu 5 303 -9 1639 107 5 0 chr20 39319584 39319799 -32834083 - AluSx SINE Alu -77 235 20 508 258 15 38 chr20 39319979 39320111 -32833771 - L2 LINE L2 0 3272 3144 525 198 12 125 chr20 39320432 39320488 -32833394 + L1ME1 LINE L1 6004 6065 -269 2219 114 0 0 chr20 39320488 39320777 -32833105 + AluSx SINE Alu 1 289 -23 525 198 12 125 chr20 39320777 39320914 -32832968 + L1ME1 LINE L1 6065 6333 -1 250 233 6 11 chr20 39320955 39321043 -32832839 - MIR SINE MIR -86 122 36 366 86 0 26 chr20 39321307 39321396 -32832486 - Alu SINE Alu -1 299 244 420 295 35 9 chr20 39321601 39321757 -32832125 - MIR SINE MIR -32 176 15 507 311 75 95 chr20 39322342 39322647 -32831235 - L2 LINE L2 -1 3271 2973 774 230 127 29 chr20 39322693 39322907 -32830975 + MIR SINE MIR 14 247 -15 524 251 99 35 chr20 39323110 39323281 -32830601 - MIR SINE MIR -79 183 2 632 244 87 6 chr20 39323555 39323727 -32830155 + MIR SINE MIR 77 262 0 236 247 24 47 chr20 39323824 39323909 -32829973 + MIR SINE MIR 61 143 -65 237 237 69 99 chr20 39324530 39324661 -32829221 + MIR SINE MIR 24 150 -112 298 247 147 0 chr20 39324676 39324792 -32829090 + L1ME1 LINE L1 5560 5613 -551 971 168 0 0 chr20 39324793 39324960 -32828922 - AluSg/x SINE Alu -9 301 135 1471 244 14 0 chr20 39324960 39325313 -32828569 + L1ME1 LINE L1 5697 6054 -112 436 154 0 0 chr20 39325313 39325391 -32828491 - FLAM_C SINE Alu -4 139 62 815 144 0 0 chr20 39325391 39325516 -32828366 - AluSg/x SINE Alu -54 256 132 349 200 25 0 chr20 39325567 39325647 -32828235 + L1MB7 LINE L1 6103 6184 0 2317 114 16 24 chr20 39325702 39326078 -32827804 - THE1C LTR MaLR -2 373 1 10741 109 22 30 chr20 39326107 39327699 -32826183 - THE1C-int LTR MaLR 0 1580 1 2085 133 27 29 chr20 39327699 39328075 -32825807 - THE1C LTR MaLR 0 375 1 1486 182 7 11 chr20 39328075 39328355 -32825527 - AluJb SINE Alu -33 279 1 707 238 70 48 chr20 39328376 39328649 -32825233 - L1ME3 LINE L1 0 6162 5884 475 320 89 54 chr20 39328665 39329221 -32824661 + L2 LINE L2 2690 3272 0 1945 147 3 19 chr20 39329337 39329651 -32824231 + AluSq SINE Alu 1 309 -4 2383 223 51 19 chr20 39329799 39330386 -32823496 - L1ME3 LINE L1 0 6162 5557 259 217 14 145 chr20 39330970 39331023 -32822859 + L1ME4a LINE L1 5696 5754 -367 2343 97 0 0 chr20 39331023 39331332 -32822550 + AluSx SINE Alu 3 311 -1 259 217 14 145 chr20 39331332 39331416 -32822466 + L1ME4a LINE L1 5754 5815 -306 2347 211 24 6 chr20 39331420 39331872 -32822010 + L1MD3 LINE L1 7481 7944 -51 1969 118 6 13 chr20 39331872 39332186 -32821696 - AluSq SINE Alu -1 312 1 2347 211 24 6 chr20 39332186 39332231 -32821651 + L1MD3 LINE L1 7944 7987 -8 2134 212 41 0 chr20 39332253 39332715 -32821167 - Charlie4a DNA MER1_type 0 508 28 236 267 35 43 chr20 39332756 39332872 -32821010 + L1ME4a LINE L1 5835 5949 -172 343 281 125 0 chr20 39332889 39332985 -32820897 - L2 LINE L2 -4 3268 3161 2086 125 0 0 chr20 39333033 39333337 -32820545 - AluSx SINE Alu -1 311 8 850 312 56 31 chr20 39333427 39333818 -32820064 - L3 LINE CR1 -195 1382 982 5876 156 53 101 chr20 39333829 39333869 -32820013 - L1MB8 LINE L1 0 6178 6138 2093 205 29 50 chr20 39333869 39334385 -32819497 - MLT1D LTR MaLR 0 505 1 5876 156 53 101 chr20 39334385 39334847 -32819035 - L1MB8 LINE L1 -40 6138 5655 2292 109 0 0 chr20 39334847 39335160 -32818722 - AluSq SINE Alu 0 313 1 5876 156 53 101 chr20 39335160 39335575 -32818307 - L1MB8 LINE L1 -523 5655 5221 4251 92 4 0 chr20 39335575 39336127 -32817755 - MER41A LTR ERV1 0 554 1 5876 156 53 101 chr20 39336127 39336195 -32817687 - L1MB8 LINE L1 -957 5221 5151 1898 133 19 7 chr20 39336195 39336503 -32817379 - AluSx SINE Alu 0 312 1 5876 156 53 101 chr20 39336503 39336709 -32817173 - L1MB8 LINE L1 -1027 5151 4937 2284 92 75 26 chr20 39336709 39337056 -32816826 - THE1B LTR MaLR 0 364 1 5876 156 53 101 chr20 39337056 39337737 -32816145 - L1MB8 LINE L1 -1241 4937 4225 777 120 60 0 chr20 39337737 39337854 -32816028 - AluJo SINE Alu -178 134 11 5876 156 53 101 chr20 39337854 39338173 -32815709 - L1MB8 LINE L1 -1953 4225 4024 1875 140 3 10 chr20 39338173 39338465 -32815417 - AluSx SINE Alu -22 290 1 5876 156 53 101 chr20 39338465 39338802 -32815080 - L1MB8 LINE L1 -2154 4024 3672 227 314 68 51 chr20 39338951 39339069 -32814813 + MIR SINE MIR 26 145 -63 346 186 144 0 chr20 39339291 39339384 -32814498 - MER5A DNA MER1_type -77 112 4 22 35 0 0 chr20 39339468 39339497 -32814385 + AT_rich Low_complexity Low_complexity 1 29 0 1053 152 0 12 chr20 39339592 39339763 -32814119 - AluSg/x SINE Alu -21 289 121 2253 86 0 0 chr20 39339986 39340276 -32813606 - AluSc SINE Alu -19 290 1 254 268 42 0 chr20 39340762 39340833 -32813049 + MIR SINE MIR 99 172 -90 2099 117 3 0 chr20 39340865 39341165 -32812717 + AluSx SINE Alu 1 301 -11 401 273 136 57 chr20 39341187 39341363 -32812519 + MIR SINE MIR 61 250 -12 201 213 0 0 chr20 39341462 39341509 -32812373 + CT-rich Low_complexity Low_complexity 3 49 0 238 163 23 0 chr20 39341943 39341986 -32811896 + MIR SINE MIR 81 124 -138 498 251 58 139 chr20 39343005 39343300 -32810582 + L2 LINE L2 2992 3262 -10 318 233 23 174 chr20 39343342 39343514 -32810368 + MIR SINE MIR 117 262 0 233 255 0 0 chr20 39343620 39343671 -32810211 - MIR SINE MIR -84 124 74 506 293 70 6 chr20 39343705 39343862 -32810020 + MIR SINE MIR 82 248 -14 198 293 136 68 chr20 39343959 39344283 -32809599 - L2 LINE L2 -8 3264 2919 269 269 43 43 chr20 39344319 39344412 -32809470 + L2 LINE L2 2934 3026 -246 706 213 131 15 chr20 39344555 39344919 -32808963 + LTR33A LTR ERVL 74 523 0 904 86 0 0 chr20 39345138 39345255 -32808627 + AluSg SINE Alu 1 117 -193 360 265 0 83 chr20 39345849 39345981 -32807901 - LTR16C LTR ERVL 0 491 371 785 293 19 60 chr20 39346417 39346626 -32807256 - L2 LINE L2 -1 3312 3119 2234 95 40 53 chr20 39346626 39346963 -32806919 + THE1C LTR MaLR 1 334 -41 2136 117 0 0 chr20 39346963 39347263 -32806619 - AluSg SINE Alu -10 300 1 2234 95 40 53 chr20 39347263 39347305 -32806577 + THE1C LTR MaLR 334 375 0 785 293 19 60 chr20 39347305 39347409 -32806473 - L2 LINE L2 -194 3119 3012 415 93 0 0 chr20 39349276 39349330 -32804552 + AluJ/FRAM SINE Alu 226 279 -33 396 0 0 0 chr20 39349330 39349374 -32804508 + (GA)n Simple_repeat Simple_repeat 1 44 0 1714 199 28 58 chr20 39349382 39349813 -32804069 + MLT1C LTR MaLR 43 460 -7 788 246 65 58 chr20 39349965 39350242 -32803640 + L2 LINE L2 2994 3272 0 392 308 23 8 chr20 39350887 39351017 -32802865 - MIR3 SINE MIR -67 141 10 2415 77 3 0 chr20 39351036 39351348 -32802534 + AluSq SINE Alu 1 313 0 285 303 35 35 chr20 39351398 39351540 -32802342 - L2 LINE L2 -181 3091 2950 1863 154 3 19 chr20 39351618 39351936 -32801946 - AluSq SINE Alu 0 313 1 433 277 63 13 chr20 39352008 39352125 -32801757 + MLT1L LTR MaLR 150 279 -336 1386 192 23 19 chr20 39352125 39352433 -32801449 - AluJb SINE Alu -3 309 1 433 277 63 13 chr20 39352433 39352474 -32801408 + MLT1L LTR MaLR 279 316 -299 314 317 150 22 chr20 39352541 39352721 -32801161 + MLT1L LTR MaLR 411 613 -2 635 98 11 11 chr20 39352744 39352836 -32801046 - MLT1A1 LTR MaLR -272 93 2 478 202 209 0 chr20 39352853 39352982 -32800900 + MIR SINE MIR 38 193 -69 2001 120 0 3 chr20 39353032 39353324 -32800558 + AluSg1 SINE Alu 1 291 -18 213 65 0 0 chr20 39353324 39353355 -32800527 + (TTAA)n Simple_repeat Simple_repeat 2 32 0 2025 94 24 7 chr20 39354187 39354475 -32799407 - AluSq SINE Alu -15 298 6 1068 268 91 48 chr20 39354504 39354875 -32799007 - LTR16C LTR ERVL -2 489 93 2331 99 0 0 chr20 39354875 39355187 -32798695 + AluSx SINE Alu 1 312 0 1068 268 91 48 chr20 39355187 39355278 -32798604 - LTR16C LTR ERVL -398 93 7 1955 114 35 0 chr20 39355362 39355651 -32798231 - AluSx SINE Alu -13 299 1 1915 118 24 0 chr20 39355651 39355940 -32797942 - AluSx SINE Alu -16 296 1 23 0 0 0 chr20 39356061 39356084 -32797798 + AT_rich Low_complexity Low_complexity 1 23 0 1623 171 0 7 chr20 39356292 39356599 -32797283 - AluJb SINE Alu 0 305 1 329 241 36 18 chr20 39356669 39356781 -32797101 - L1ME4a LINE L1 -21 6100 5987 713 120 154 8 chr20 39356800 39356917 -32796965 - AluJo SINE Alu -177 135 2 266 203 0 25 chr20 39357015 39357094 -32796788 + GA-rich Low_complexity Low_complexity 1 77 0 921 139 46 0 chr20 39357761 39357912 -32795970 - AluJb SINE Alu -26 286 129 470 265 26 0 chr20 39358098 39358215 -32795667 + MER103 DNA DNA 3 122 -44 888 192 124 21 chr20 39358425 39358618 -32795264 - MLT1F LTR MaLR -9 533 321 * 2290 189 102 38 chr20 39358606 39359104 -32794778 + MLT1F LTR MaLR 13 542 0 1112 137 112 0 chr20 39359458 39359655 -32794227 - AluJb SINE Alu -12 300 82 653 204 50 45 chr20 39359827 39360047 -32793835 - L1MC5 LINE L1 -76 7885 7665 246 269 148 19 chr20 39360287 39360395 -32793487 + MIR SINE MIR 37 158 -104 1566 182 0 20 chr20 39361022 39361319 -32792563 - AluJo SINE Alu -21 291 1 682 281 69 39 chr20 39361399 39361705 -32792177 - L2 LINE L2 0 3313 2999 729 134 116 17 chr20 39361811 39361983 -32791899 - MER53 DNA DNA 0 189 1 313 322 33 8 chr20 39362062 39362183 -32791699 + L2 LINE L2 2924 3047 -266 1878 119 29 23 chr20 39362374 39362684 -32791198 - AluJo SINE Alu 0 312 1 526 282 31 0 chr20 39362717 39362880 -32791002 - MIR SINE MIR -21 241 74 194 328 0 0 chr20 39362857 39362915 -32790967 + MIR SINE MIR 116 173 -89 * 481 252 37 0 chr20 39362924 39363031 -32790851 + L2 LINE L2 3190 3300 -13 207 0 0 0 chr20 39363031 39363054 -32790828 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 329 198 37 160 chr20 39363055 39363157 -32790725 - MIR SINE MIR -64 144 31 579 222 4 122 chr20 39363157 39363189 -32790693 + MER63A DNA MER1_type 5 39 -1649 1584 157 70 0 chr20 39363189 39363306 -32790576 + AluJb SINE Alu 1 108 -204 258 32 0 0 chr20 39363306 39363337 -32790545 + (CAA)n Simple_repeat Simple_repeat 3 33 0 1584 157 70 0 chr20 39363337 39363506 -32790376 + AluJb SINE Alu 108 307 -5 579 222 4 122 chr20 39363506 39363703 -32790179 + MER63A DNA MER1_type 39 207 -3 329 198 37 160 chr20 39363703 39363763 -32790119 - MIR SINE MIR -177 31 1 2162 91 3 3 chr20 39363793 39364090 -32789792 - AluSc SINE Alu -12 297 1 225 246 0 141 chr20 39364167 39364256 -32789626 + L2 LINE L2 2691 2754 -560 2089 102 34 3 chr20 39364256 39364549 -32789333 - AluSx SINE Alu -10 302 1 225 246 0 141 chr20 39364549 39364601 -32789281 + L2 LINE L2 2754 2812 -502 * 542 278 88 42 chr20 39364595 39364879 -32789003 - L2 LINE L2 -21 3292 2996 36 23 0 0 chr20 39365011 39365054 -32788828 + AT_rich Low_complexity Low_complexity 1 43 0 207 287 26 61 chr20 39365218 39365333 -32788549 - MIR3 SINE MIR -42 166 56 * 286 246 90 67 chr20 39365248 39365346 -32788536 + MIR3 SINE MIR 10 113 -95 1214 137 164 55 chr20 39365346 39365638 -32788244 - MER33 DNA MER1_type 0 324 1 286 246 90 67 chr20 39365638 39365673 -32788209 + MIR3 SINE MIR 113 146 -62 473 309 25 25 chr20 39366436 39366598 -32787284 + MIR SINE MIR 47 208 -54 293 258 62 41 chr20 39366720 39366817 -32787065 - MIR SINE MIR -76 132 34 832 160 24 173 chr20 39366876 39367129 -32786753 + MER33 DNA MER1_type 1 180 -2405 1525 181 50 0 chr20 39367129 39367411 -32786471 - AluJo SINE Alu -10 302 7 832 160 24 173 chr20 39367411 39367538 -32786344 + MER33 DNA MER1_type 180 324 0 815 250 52 16 chr20 39367538 39367790 -32786092 + MIR SINE MIR 2 262 0 928 271 77 58 chr20 39368019 39368218 -32785664 - L2 LINE L2 0 3313 3119 1120 152 28 121 chr20 39368218 39368359 -32785523 + MER33 DNA MER1_type 2 155 -2430 2328 81 3 0 chr20 39368359 39368666 -32785216 - AluSp SINE Alu -5 308 1 1120 152 28 121 chr20 39368666 39368823 -32785059 + MER33 DNA MER1_type 155 264 -2321 2269 104 0 3 chr20 39368823 39369131 -32784751 + AluSp SINE Alu 1 307 -6 1120 152 28 121 chr20 39369131 39369186 -32784696 + MER33 DNA MER1_type 264 323 -1 928 271 77 58 chr20 39369186 39369521 -32784361 - L2 LINE L2 -194 3119 2772 321 355 43 7 chr20 39369520 39369658 -32784224 - MIR3 SINE MIR -28 180 38 * 355 330 96 0 chr20 39369672 39369860 -32784022 - MIR SINE MIR -56 206 1 1876 168 0 0 chr20 39370687 39370997 -32782885 + AluJb SINE Alu 1 310 -2 808 226 45 6 chr20 39371062 39371239 -32782643 - MIR SINE MIR -77 185 2 444 302 62 26 chr20 39371239 39371426 -32782456 - MIR SINE MIR -21 241 48 446 145 72 0 chr20 39371624 39371707 -32782175 - MER5A DNA MER1_type -68 121 33 502 234 17 15 chr20 39371830 39371962 -32781920 + MIR3 SINE MIR 65 202 -6 550 305 12 36 chr20 39372026 39372193 -32781689 + MIR3 SINE MIR 30 192 -16 443 366 49 9 chr20 39373044 39373268 -32780614 - L1MC4a LINE L1 -1903 5905 5673 768 168 0 46 chr20 39373973 39374104 -32779778 - FLAM_C SINE Alu -8 125 1 196 369 0 0 chr20 39374734 39374799 -32779083 + L2 LINE L2 3208 3272 0 1259 183 186 3 chr20 39375018 39375329 -32778553 - L1MD3 LINE L1 -10 7985 7618 2276 94 27 0 chr20 39375701 39376000 -32777882 - AluSp SINE Alu -6 307 1 210 288 23 141 chr20 39376096 39376273 -32777609 - L2 LINE L2 -89 3183 3028 1814 161 14 0 chr20 39376360 39376646 -32777236 + AluJo SINE Alu 5 294 -18 780 204 20 146 chr20 39377039 39377333 -32776549 + MIR SINE MIR 4 260 -2 22 0 0 0 chr20 39377385 39377407 -32776475 + AT_rich Low_complexity Low_complexity 1 22 0 15575 122 45 9 chr20 39377843 39379852 -32774030 - Tigger1 DNA MER2_type -2 2416 480 204 40 0 0 chr20 39379852 39379877 -32774005 + (GA)n Simple_repeat Simple_repeat 1 25 0 15575 122 45 9 chr20 39379877 39380109 -32773773 - Tigger1 DNA MER2_type -1938 480 258 1821 150 52 0 chr20 39380109 39380395 -32773487 - AluJb SINE Alu -11 301 1 15575 122 45 9 chr20 39380395 39380485 -32773397 - Tigger1 DNA MER2_type -2160 258 1 2356 90 3 0 chr20 39380780 39381079 -32772803 + AluSc SINE Alu 1 300 -9 273 229 131 72 chr20 39381843 39381991 -32771891 - MIR3 SINE MIR -43 165 9 912 290 116 48 chr20 39383332 39383958 -32769924 - L2 LINE L2 -1 3312 2654 564 302 23 0 chr20 39385785 39385957 -32767925 - MIR SINE MIR -24 238 63 236 348 62 5 chr20 39386062 39386216 -32767666 + L2 LINE L2 3072 3312 -1 187 267 0 0 chr20 39386544 39386589 -32767293 - L2 LINE L2 0 3313 3269 278 242 198 11 chr20 39386808 39386899 -32766983 - MIR SINE MIR -135 127 20 463 301 42 42 chr20 39387146 39387359 -32766523 + MIR SINE MIR 41 253 -9 7100 56 6 33 chr20 39389530 39390578 -32763304 - SVA Other Other -629 1386 433 302 230 180 30 chr20 39390851 39390951 -32762931 + MIR3 SINE MIR 44 158 -50 1633 161 13 30 chr20 39391753 39391937 -32761945 - AluJb SINE Alu -1 311 132 2282 81 0 17 chr20 39391937 39392251 -32761631 - AluY SINE Alu 0 311 1 1633 161 13 30 chr20 39392251 39392371 -32761511 - AluJb SINE Alu -180 132 12 26 30 0 0 chr20 39392413 39392446 -32761436 + AT_rich Low_complexity Low_complexity 1 33 0 342 346 53 60 chr20 39392695 39392978 -32760904 - L2 LINE L2 -25 3247 2967 205 346 124 7 chr20 39393288 39393441 -32760441 - L3 LINE CR1 -1108 469 299 647 271 80 44 chr20 39393726 39394086 -32759796 - L1ME LINE L1 -469 5701 5325 2019 139 0 0 chr20 39394115 39394448 -32759434 + AluSx SINE Alu 1 333 0 184 370 43 22 chr20 39394633 39394725 -32759157 - MIR SINE MIR -94 114 21 190 230 95 95 chr20 39394785 39394859 -32759023 + L2 LINE L2 3199 3272 0 222 94 0 0 chr20 39395648 39395680 -32758202 - MIR SINE MIR -74 188 157 239 346 47 19 chr20 39396356 39396567 -32757315 + L3 LINE CR1 1317 1533 -44 1957 142 20 3 chr20 39396832 39397128 -32756754 - AluJo SINE Alu -9 303 3 2035 125 3 3 chr20 39397224 39397519 -32756363 - AluSq SINE Alu -18 295 1 2144 135 0 0 chr20 39397623 39397926 -32755956 + AluSx SINE Alu 1 303 -9 335 331 73 16 chr20 39397981 39398105 -32755777 - MIR SINE MIR -110 152 22 270 219 83 83 chr20 39398376 39398472 -32755410 + MIR3 SINE MIR 89 184 -24 1581 162 70 7 chr20 39400026 39400342 -32753540 + MER33 DNA MER1_type 1 318 -6 351 266 138 9 chr20 39400347 39400456 -32753426 + L2 LINE L2 3150 3272 0 287 352 32 0 chr20 39402395 39402520 -32751362 - MIR3 SINE MIR -68 140 12 799 212 0 0 chr20 39402617 39402749 -32751133 + FLAM_A SINE Alu 1 132 -1 204 327 80 9 chr20 39402768 39402881 -32751001 + MIR3 SINE MIR 1 121 -87 24 32 0 0 chr20 39402881 39402912 -32750970 + AT_rich Low_complexity Low_complexity 1 31 0 5660 140 27 14 chr20 39402913 39403160 -32750722 - L1MA7 LINE L1 0 6291 6049 2553 57 3 0 chr20 39403160 39403456 -32750426 - AluSp SINE Alu -16 297 1 5660 140 27 14 chr20 39403456 39404164 -32749718 - L1MA7 LINE L1 -242 6049 5323 1003 97 0 8 chr20 39404620 39404754 -32749128 - AluJb SINE Alu -179 133 1 353 286 36 0 chr20 39405038 39405150 -32748732 + MIR SINE MIR 85 200 -62 191 309 69 106 chr20 39405223 39405440 -32748442 - L2 LINE L2 -213 3059 2851 1063 260 91 44 chr20 39405455 39405862 -32748020 + L2 LINE L2 2888 3313 0 210 71 0 0 chr20 39407123 39407151 -32746731 + (TCCCC)n Simple_repeat Simple_repeat 3 30 0 238 235 0 0 chr20 39407155 39407206 -32746676 - L2 LINE L2 -1 3271 3221 196 244 37 49 chr20 39407270 39407352 -32746530 - L2 LINE L2 -473 2841 2761 438 274 0 0 chr20 39408180 39408264 -32745618 - MER58 DNA MER1_type -2336 84 1 234 159 45 0 chr20 39408411 39408455 -32745427 + L2 LINE L2 3268 3313 0 1684 126 77 0 chr20 39408465 39408712 -32745170 - AluSx SINE Alu -15 297 32 2272 105 0 3 chr20 39408863 39409169 -32744713 + AluY SINE Alu 1 305 -6 1558 260 85 30 chr20 39409498 39410029 -32743853 - MER68 LTR ERV1 0 562 3 604 236 76 0 chr20 39410146 39410303 -32743579 + MIR SINE MIR 89 257 -5 258 381 42 18 chr20 39410655 39410823 -32743059 - L2 LINE L2 -224 3048 2877 351 0 0 0 chr20 39411000 39411039 -32742843 + (TG)n Simple_repeat Simple_repeat 2 40 0 804 284 128 25 chr20 39411208 39411616 -32742266 - L1MC4a LINE L1 -1897 5911 5462 219 306 149 8 chr20 39411624 39411745 -32742137 + L2 LINE L2 3115 3252 -20 366 179 30 0 chr20 39412523 39412590 -32741292 - Charlie1 DNA MER1_type -4 2757 2689 * 1342 147 16 52 chr20 39412587 39412838 -32741044 - Charlie1 DNA MER1_type -2519 242 1 299 214 43 0 chr20 39413284 39413354 -32740528 - MIR SINE MIR -13 249 177 425 247 34 0 chr20 39413518 39413607 -32740275 + L2 LINE L2 3209 3300 -13 265 262 12 34 chr20 39413605 39413696 -32740186 - MIR SINE MIR -110 98 20 * 343 286 161 6 chr20 39413847 39414008 -32739874 - L3 LINE CR1 -11 1566 1381 253 311 107 0 chr20 39414032 39414135 -32739747 - L3 LINE CR1 -385 1192 1079 197 377 13 0 chr20 39414242 39414319 -32739563 - L2 LINE L2 -7 3265 3188 531 319 20 54 chr20 39414400 39414698 -32739184 - L3 LINE CR1 -677 900 613 2168 131 0 0 chr20 39414725 39415022 -32738860 - AluSx SINE Alu -12 300 4 297 304 87 54 chr20 39415393 39415784 -32738098 + L1ME LINE L1 4628 5031 -1115 557 278 176 13 chr20 39416060 39416440 -32737442 + L1ME LINE L1 5351 5816 -305 549 237 17 40 chr20 39416454 39416627 -32737255 + MER117 DNA MER1_type 1 169 -28 244 257 81 14 chr20 39417269 39417343 -32736539 - L2 LINE L2 -55 3258 3180 865 198 219 50 chr20 39417374 39417615 -32736267 - MIR SINE MIR 0 262 1 281 248 89 30 chr20 39418962 39419017 -32734865 + L2 LINE L2 3204 3254 -59 2012 152 10 13 chr20 39419017 39419326 -32734556 + AluSx SINE Alu 1 308 -4 281 248 89 30 chr20 39419326 39419371 -32734511 + L2 LINE L2 3254 3310 -3 1327 165 39 31 chr20 39419496 39419756 -32734126 - AluJo SINE Alu -8 304 43 280 271 94 12 chr20 39419772 39419857 -32734025 + MIR SINE MIR 171 262 0 248 297 0 0 chr20 39420373 39420437 -32733445 - L2 LINE L2 -4 3268 3205 1592 144 37 9 chr20 39420494 39420818 -32733064 - MLT1A1 LTR MaLR 0 365 1 198 0 0 0 chr20 39423123 39423145 -32730737 + (TAA)n Simple_repeat Simple_repeat 1 22 0 396 309 10 36 chr20 39425651 39425816 -32728066 - MIR SINE MIR -52 210 46 298 333 46 0 chr20 39425851 39425938 -32727944 - MIR SINE MIR -61 147 57 987 113 0 0 chr20 39426209 39426342 -32727540 - FLAM_C SINE Alu 0 133 1 183 80 0 0 chr20 39426372 39426397 -32727485 + (TGGA)n Simple_repeat Simple_repeat 1 25 0 2205 118 3 0 chr20 39426733 39427020 -32726862 - AluSx SINE Alu -16 296 9 329 197 76 0 chr20 39428185 39428251 -32725631 - MIR3 SINE MIR -43 165 95 198 0 0 0 chr20 39428322 39428344 -32725538 + (TC)n Simple_repeat Simple_repeat 1 22 0 333 125 0 0 chr20 39428350 39428406 -32725476 + (TG)n Simple_repeat Simple_repeat 1 56 0 188 108 0 27 chr20 39428503 39428540 -32725342 + (TTTTC)n Simple_repeat Simple_repeat 5 40 0 2030 134 0 40 chr20 39428551 39428872 -32725010 - AluJo SINE Alu -4 308 1 268 255 221 35 chr20 39429818 39429963 -32723919 - MIR SINE MIR -70 192 21 284 248 59 20 chr20 39430711 39430812 -32723070 + MER5A DNA MER1_type 22 126 -63 26 0 0 0 chr20 39431542 39431568 -32722314 + AT_rich Low_complexity Low_complexity 1 26 0 736 258 58 11 chr20 39432495 39432685 -32721197 + MIR SINE MIR 63 261 -1 187 233 0 23 chr20 39432697 39432740 -32721142 + MIR SINE MIR 216 257 -5 605 300 135 30 chr20 39433478 39434082 -32719800 - L2 LINE L2 -1 3312 2626 293 328 84 0 chr20 39435658 39435777 -32718105 + MIR3 SINE MIR 34 162 -46 280 309 66 79 chr20 39435821 39435973 -32717909 - L2 LINE L2 0 3272 3123 254 191 0 0 chr20 39436087 39436129 -32717753 - MIR SINE MIR -113 149 108 186 385 24 0 chr20 39436363 39436446 -32717436 + MIR SINE MIR 42 126 -82 421 324 28 45 chr20 39436789 39436968 -32716914 + MIR SINE MIR 22 197 -65 313 304 112 53 chr20 39438295 39438801 -32715081 - L2 LINE L2 -18 3254 2717 291 271 145 29 chr20 39440396 39440484 -32713398 - L1ME LINE L1 -317 5873 5797 1825 127 54 30 chr20 39440484 39440685 -32713197 + MER44D DNA MER2_type 1 196 -2295 2367 99 0 13 chr20 39440685 39440999 -32712883 - AluSx SINE Alu -2 310 1 1825 127 54 30 chr20 39440999 39441128 -32712754 + MER44D DNA MER2_type 196 609 0 291 271 145 29 chr20 39441128 39441246 -32712636 - L1ME LINE L1 -393 5797 5643 342 277 122 43 chr20 39441294 39441482 -32712400 - L1ME LINE L1 -2338 5539 5364 356 247 52 21 chr20 39442928 39443025 -32710857 + MIR SINE MIR 48 147 -115 2780 227 58 30 chr20 39443171 39443924 -32709958 - L1MEc LINE L1 -2962 3253 2499 2576 93 8 3 chr20 39443924 39444277 -32709605 - THE1A LTR MaLR 0 355 1 2780 227 58 30 chr20 39444277 39444615 -32709267 - L1MEc LINE L1 -3716 2499 2172 906 133 0 13 chr20 39444619 39444770 -32709112 - L1MA10 LINE L1 -10 6324 6176 1193 176 27 0 chr20 39444780 39445069 -32708813 - L1MB1 LINE L1 -70 6119 5782 654 286 6 6 chr20 39445069 39445237 -32708645 - MER8 DNA MER2_type 0 239 72 199 311 87 29 chr20 39445519 39445622 -32708260 - MIR SINE MIR -108 154 46 557 306 59 50 chr20 39446367 39446954 -32706928 + L1ME2 LINE L1 5284 5888 -276 24 0 0 0 chr20 39447127 39447151 -32706731 + AT_rich Low_complexity Low_complexity 1 24 0 27 0 0 0 chr20 39447314 39447341 -32706541 + AT_rich Low_complexity Low_complexity 1 27 0 756 212 18 0 chr20 39447490 39447660 -32706222 - L1MB7 LINE L1 -164 6020 5848 * 3764 180 31 83 chr20 39447657 39448781 -32705101 + L1MB3 LINE L1 4871 5905 -278 234 0 0 0 chr20 39448781 39448807 -32705075 + (CA)n Simple_repeat Simple_repeat 1 26 0 3764 180 31 83 chr20 39448807 39449072 -32704810 + L1MB3 LINE L1 5905 6182 -1 1703 195 36 3 chr20 39449440 39449773 -32704109 - MER2 DNA MER2_type 0 344 1 265 231 191 4 chr20 39450025 39450250 -32703632 + HAL1 LINE L1 996 1262 -1245 404 294 128 38 chr20 39450349 39450584 -32703298 - HAL1 LINE L1 -1139 1368 1113 28 29 0 0 chr20 39451635 39451670 -32702212 + AT_rich Low_complexity Low_complexity 1 35 0 583 217 107 122 chr20 39451716 39452126 -32701756 - MLT1J LTR MaLR -3 508 105 938 214 114 23 chr20 39452376 39452727 -32701155 - L1MB8 LINE L1 -38 6140 5758 32 43 0 0 chr20 39452736 39452782 -32701100 + AT_rich Low_complexity Low_complexity 1 46 0 1081 202 83 12 chr20 39452887 39453140 -32700742 + MLT1F LTR MaLR 267 537 -5 2996 147 6 23 chr20 39453466 39453990 -32699892 - L1PA16 LINE L1 0 6166 5652 274 286 1 0 chr20 39454258 39454357 -32699525 + L1 LINE L1 4891 4990 -1156 273 180 49 0 chr20 39455791 39455852 -32698030 - MIR SINE MIR -55 207 144 859 237 101 9 chr20 39456287 39456515 -32697367 + MLT1G LTR MaLR 32 280 -310 222 37 0 0 chr20 39456686 39456713 -32697169 + (CCTA)n Simple_repeat Simple_repeat 1 27 0 1030 118 88 53 chr20 39456898 39457126 -32696756 - MLT2A2 LTR ERVL 0 453 218 1330 221 40 24 chr20 39457232 39457607 -32696275 - MLT1D-int LTR MaLR -990 381 1 2276 189 12 43 chr20 39457608 39458122 -32695760 - MLT1D LTR MaLR -1 504 7 896 267 64 17 chr20 39458125 39458421 -32695461 + LTR16C LTR ERVL 181 490 -1 698 182 0 0 chr20 39458601 39458711 -32695171 + FLAM_A SINE Alu 16 125 -17 1079 187 23 14 chr20 39458814 39459028 -32694854 + MER20 DNA MER1_type 4 219 0 1116 149 28 102 chr20 39459512 39459834 -32694048 + L1 LINE L1 4427 4724 -1422 973 270 32 83 chr20 39460934 39461818 -32692064 - L1MC4 LINE L1 0 8042 7204 294 109 0 0 chr20 39461848 39461894 -32691988 + L1MC4 LINE L1 7093 7138 -904 755 255 48 44 chr20 39462100 39462351 -32691531 - MIR SINE MIR -9 253 2 2384 66 10 3 chr20 39463596 39463898 -32689984 - AluY SINE Alu -7 304 1 321 351 30 8 chr20 39463911 39464042 -32689840 + MIR3 SINE MIR 32 165 -43 1190 244 19 22 chr20 39464518 39464837 -32689045 - MLT1I LTR MaLR -8 401 84 471 206 0 0 chr20 39465243 39465335 -32688547 + MER34C LTR ERV1 1 92 -493 1019 161 55 46 chr20 39467175 39467255 -32686627 - Tigger5 DNA MER2_type 0 2323 2245 782 212 18 12 chr20 39467255 39467420 -32686462 + FRAM SINE Alu 1 166 0 1019 161 55 46 chr20 39467420 39467557 -32686325 - Tigger5 DNA MER2_type -78 2245 2104 1218 151 17 17 chr20 39467557 39467789 -32686093 + Charlie3 DNA MER1_type 1 232 -2478 440 141 0 0 chr20 39467791 39467855 -32686027 + Charlie3 DNA MER1_type 178 241 -2469 218 405 14 27 chr20 39468099 39468247 -32685635 - L2 LINE L2 0 3272 3127 336 216 0 0 chr20 39471017 39471114 -32682768 + (CATTC)n Simple_repeat Simple_repeat 1 97 0 21 0 0 0 chr20 39471750 39471771 -32682111 + AT_rich Low_complexity Low_complexity 1 21 0 13265 137 23 3 chr20 39472607 39474809 -32679073 - Tigger1 DNA MER2_type -172 2246 1 423 211 73 8 chr20 39475668 39475791 -32678091 + Charlie8 DNA MER1_type 84 214 -2203 1460 152 33 23 chr20 39475792 39476095 -32677787 + L1MB8 LINE L1 5856 6161 -17 452 346 53 5 chr20 39477165 39477373 -32676509 - MIR SINE MIR -5 257 40 219 366 59 0 chr20 39478028 39478129 -32675753 + MIR SINE MIR 30 136 -72 249 33 0 0 chr20 39478190 39478220 -32675662 + (CA)n Simple_repeat Simple_repeat 2 31 0 1741 207 22 18 chr20 39478792 39479237 -32674645 + L1MA9 LINE L1 5830 6276 -36 194 293 121 0 chr20 39480985 39481043 -32672839 + L2 LINE L2 3129 3193 -79 241 381 79 14 chr20 39481083 39481222 -32672660 + MIR3 SINE MIR 40 187 -21 324 196 0 0 chr20 39481318 39481374 -32672508 + Tigger5 DNA MER2_type 1 56 -2267 476 185 0 0 chr20 39481379 39481460 -32672422 + Tigger5 DNA MER2_type 2234 2314 -9 437 313 27 27 chr20 39481602 39481749 -32672133 + MIR SINE MIR 36 182 -80 1399 167 21 14 chr20 39482675 39482956 -32670926 - L1MA9 LINE L1 -439 5873 5591 4023 156 42 11 chr20 39482967 39483769 -32670113 - L1MA8 LINE L1 -1 6290 5464 459 331 78 9 chr20 39484181 39484580 -32669302 + MLT1K LTR MaLR 115 588 0 364 349 86 14 chr20 39484819 39485028 -32668854 + MIR SINE MIR 2 225 -37 702 205 17 36 chr20 39485037 39485253 -32668629 - L1M4 LINE L1 -3786 2360 2146 340 330 9 0 chr20 39486621 39486733 -32667149 + MIR SINE MIR 69 181 -81 383 299 15 15 chr20 39486789 39486923 -32666959 + MLT1H LTR MaLR 29 162 -387 255 224 45 0 chr20 39487089 39487156 -32666726 + MLT1H LTR MaLR 479 548 -1 723 189 11 89 chr20 39487469 39487659 -32666223 - MER57A LTR ERV1 -1 402 228 1661 191 3 25 chr20 39489251 39489566 -32664316 - AluJo SINE Alu -4 308 1 448 313 102 12 chr20 39489732 39489898 -32663984 - MER5A DNA MER1_type -1 188 8 649 222 141 0 chr20 39492317 39492551 -32661331 + LTR50 LTR ERVL 8 274 -521 318 210 22 10 chr20 39492762 39492860 -32661022 + LTR50 LTR ERVL 425 795 0 2084 123 7 13 chr20 39492978 39493279 -32660603 - AluSx SINE Alu -13 299 1 181 268 0 0 chr20 39544148 39544189 -32609693 - L2 LINE L2 -90 3223 3183 180 347 28 14 chr20 39544545 39544617 -32609265 + L2 LINE L2 104 176 -3138 463 295 112 14 chr20 39544740 39545064 -32608818 + L2 LINE L2 237 646 -2668 681 298 217 13 chr20 39545064 39545511 -32608371 + L2 LINE L2 2423 2960 -354 267 331 25 38 chr20 39545523 39545680 -32608202 + L2 LINE L2 3097 3251 -62 628 208 54 0 chr20 39545692 39545822 -32608060 - MER5A DNA MER1_type -4 185 49 198 0 0 0 chr20 39545827 39545849 -32608033 + (CTG)n Simple_repeat Simple_repeat 2 23 0 1064 178 104 107 chr20 39545902 39546268 -32607614 - MLT1A1 LTR MaLR 0 365 1 323 248 124 0 chr20 39547085 39547198 -32606684 + MER5B DNA MER1_type 52 178 0 2356 82 0 13 chr20 39547255 39547570 -32606312 - AluY SINE Alu 0 311 1 950 176 29 12 chr20 39547572 39547742 -32606140 - AluJb SINE Alu -9 303 131 227 284 40 14 chr20 39547742 39547816 -32606066 + MIR SINE MIR 79 154 -108 2007 138 3 3 chr20 39547947 39548245 -32605637 + AluJb SINE Alu 1 298 -14 282 261 0 0 chr20 39548503 39548572 -32605310 - MER117 DNA MER1_type -126 71 3 335 377 7 7 chr20 39548850 39548996 -32604886 - MIR SINE MIR -109 153 8 479 293 117 5 chr20 39550810 39551015 -32602867 - L1MC/D LINE L1 -2014 5794 5567 208 298 160 11 chr20 39551188 39551282 -32602600 - MIR SINE MIR -1 261 154 631 144 10 0 chr20 39551294 39551391 -32602491 - AluJ/FLAM SINE Alu -213 99 2 218 234 289 23 chr20 39551393 39551521 -32602361 - MIR SINE MIR -100 162 1 228 262 16 16 chr20 39552007 39552068 -32601814 - L2 LINE L2 -11 3302 3242 636 317 78 32 chr20 39552960 39553332 -32600550 - L2 LINE L2 -77 3236 2848 393 286 108 24 chr20 39553357 39553570 -32600312 - L2 LINE L2 -569 2745 2515 2149 120 20 0 chr20 39554190 39554491 -32599391 + AluSx SINE Alu 1 307 -5 264 289 135 17 chr20 39554566 39554734 -32599148 - MIR SINE MIR -18 244 44 2016 105 52 0 chr20 39554864 39555150 -32598732 + AluSq SINE Alu 1 301 -12 422 311 30 54 chr20 39555158 39555325 -32598557 - MIR SINE MIR -21 241 79 541 197 97 1 chr20 39555732 39555860 -32598022 + MIR SINE MIR 9 148 -60 443 356 86 29 chr20 39556529 39556903 -32596979 - L2 LINE L2 -24 3248 2854 267 326 63 37 chr20 39557013 39557203 -32596679 - L2 LINE L2 -3 3269 3075 361 333 47 0 chr20 39557505 39557655 -32596227 - MIR3 SINE MIR -38 170 14 182 294 88 0 chr20 39558277 39558345 -32595537 + L2 LINE L2 3177 3250 -63 576 285 21 112 chr20 39558378 39558545 -32595337 - L2 LINE L2 -37 3276 3095 1882 155 10 0 chr20 39558545 39558849 -32595033 + AluJo SINE Alu 1 307 -5 2031 103 18 4 chr20 39558857 39559169 -32594713 + AluSq SINE Alu 1 316 0 576 285 21 112 chr20 39559169 39559366 -32594516 - L2 LINE L2 -225 3088 2936 2179 108 3 7 chr20 39559864 39560170 -32593712 - AluSx SINE Alu -7 305 1 342 337 31 31 chr20 39560229 39560392 -32593490 - MIR SINE MIR -54 208 46 406 269 7 48 chr20 39560398 39560543 -32593339 + L1MC4 LINE L1 7738 7876 -166 283 340 9 28 chr20 39560702 39560808 -32593074 - MIR SINE MIR -92 170 67 343 283 26 62 chr20 39561591 39561753 -32592129 - MIR SINE MIR -65 143 27 261 295 162 0 chr20 39561796 39561901 -32591981 - L3 LINE CR1 -111 1466 1345 343 328 64 0 chr20 39561956 39562081 -32591801 - MIR3 SINE MIR -7 201 69 315 303 198 21 chr20 39562191 39562892 -32590990 - L2 LINE L2 -1 3271 2460 528 243 46 33 chr20 39563394 39563546 -32590336 - MIR SINE MIR -58 204 51 381 316 40 29 chr20 39563937 39564111 -32589771 + MIR3 SINE MIR 8 183 -25 547 288 16 78 chr20 39564145 39564232 -32589650 - MIR SINE MIR -3 259 168 2112 124 13 7 chr20 39564232 39564538 -32589344 + AluSx SINE Alu 1 308 -4 547 288 16 78 chr20 39564538 39564693 -32589189 - MIR SINE MIR -94 168 32 339 299 97 26 chr20 39564850 39565005 -32588877 + MIR SINE MIR 73 237 -25 332 287 147 0 chr20 39565012 39565141 -32588741 - MIR SINE MIR -67 195 48 264 59 0 0 chr20 39565200 39565234 -32588648 + (TGGA)n Simple_repeat Simple_repeat 2 35 0 221 318 60 33 chr20 39565919 39566070 -32587812 - MIR3 SINE MIR -24 184 30 1002 174 0 11 chr20 39566112 39566290 -32587592 + FRAM SINE Alu 1 175 -1 268 370 48 7 chr20 39566437 39566583 -32587299 + MIR SINE MIR 111 262 0 * 663 225 102 5 chr20 39566579 39566788 -32587094 + MIR SINE MIR 31 256 -6 284 328 103 0 chr20 39566843 39566959 -32586923 - L2 LINE L2 -5 3267 3140 497 269 182 8 chr20 39566993 39567235 -32586647 - L2 LINE L2 -4 3309 3026 435 292 51 7 chr20 39567680 39567817 -32586065 - MIR SINE MIR -74 188 46 252 348 0 0 chr20 39567827 39567919 -32585963 + L3 LINE CR1 1379 1470 -107 242 325 38 0 chr20 39567968 39568048 -32585834 - L2 LINE L2 -62 3251 3169 1458 175 41 15 chr20 39568083 39568351 -32585531 + AluJo SINE Alu 1 275 -37 1128 85 11 6 chr20 39568368 39568398 -32585484 + (TTCC)n Simple_repeat Simple_repeat 1 207 0 1128 85 11 6 chr20 39568398 39568574 -32585308 + (TTCC)n Simple_repeat Simple_repeat 3 179 0 1606 183 16 22 chr20 39568627 39568939 -32584943 - AluJb SINE Alu -1 311 2 400 278 194 5 chr20 39569244 39569429 -32584453 + MIR SINE MIR 22 252 -10 1895 139 6 16 chr20 39569496 39569819 -32584063 + MER33 DNA MER1_type 1 320 -4 556 174 97 45 chr20 39570149 39570304 -32583578 + MLT1B LTR MaLR 1 163 -211 2069 116 0 7 chr20 39570315 39570633 -32583249 + AluSx SINE Alu 1 316 0 211 209 23 0 chr20 39570653 39570696 -32583186 + CT-rich Low_complexity Low_complexity 4 47 0 766 252 5 19 chr20 39570697 39570903 -32582979 + MLT1B LTR MaLR 188 390 0 447 320 39 22 chr20 39571016 39571194 -32582688 + MIR3 SINE MIR 3 183 -25 1501 178 34 20 chr20 39571210 39571508 -32582374 + AluJo SINE Alu 1 302 -10 201 298 36 56 chr20 39572107 39572256 -32581626 + MER5A DNA MER1_type 20 184 -5 679 254 12 12 chr20 39572269 39572434 -32581448 + MER5B DNA MER1_type 1 165 -13 346 295 0 11 chr20 39572486 39572581 -32581301 - MIR SINE MIR -73 135 42 478 297 62 5 chr20 39574009 39574203 -32579679 + MIR SINE MIR 3 206 -56 335 322 70 0 chr20 39574257 39574400 -32579482 + MIR3 SINE MIR 1 154 -54 237 324 29 20 chr20 39574450 39574552 -32579330 + MIR SINE MIR 77 179 -83 * 1094 243 42 0 chr20 39574518 39574757 -32579125 - MIR SINE MIR 0 262 14 213 324 68 0 chr20 39574767 39574841 -32579041 + MIR SINE MIR 158 236 -26 2282 108 0 0 chr20 39575134 39575440 -32578442 - AluSg SINE Alu -4 306 1 185 305 0 51 chr20 39575697 39575756 -32578126 + MIR SINE MIR 42 97 -111 33 25 0 0 chr20 39576485 39576525 -32577357 + GC_rich Low_complexity Low_complexity 1 40 0 181 325 84 0 chr20 39576648 39576731 -32577151 + MIR SINE MIR 76 165 -97 363 182 0 0 chr20 39576837 39576914 -32576968 + (CA)n Simple_repeat Simple_repeat 1 77 0 461 325 95 26 chr20 39577084 39577315 -32576567 - MIR SINE MIR 0 262 16 226 106 43 0 chr20 39577643 39577690 -32576192 + GA-rich Low_complexity Low_complexity 2 50 0 21 0 0 0 chr20 39577932 39577953 -32575929 + GC_rich Low_complexity Low_complexity 1 21 0 213 94 0 0 chr20 39578566 39578598 -32575284 + (CA)n Simple_repeat Simple_repeat 1 32 0 516 265 26 13 chr20 39579576 39579727 -32574155 - MIR SINE MIR -95 167 15 183 129 32 0 chr20 39580983 39581014 -32572868 + L2 LINE L2 3264 3295 -18 371 282 159 18 chr20 39581094 39581264 -32572618 - MIR SINE MIR -10 252 59 344 293 18 67 chr20 39581618 39581710 -32572172 - MER5B DNA MER1_type -22 156 74 1770 173 3 3 chr20 39581710 39582011 -32571871 - AluJo SINE Alu -3 309 9 344 293 18 67 chr20 39582011 39582082 -32571800 - MER5B DNA MER1_type -104 74 1 216 122 0 0 chr20 39582266 39582307 -32571575 + (CA)n Simple_repeat Simple_repeat 1 41 0 257 308 55 11 chr20 39582990 39583081 -32570801 - MIR3 SINE MIR -28 180 86 1860 146 33 0 chr20 39583143 39583444 -32570438 + AluJo SINE Alu 1 311 -1 693 296 20 5 chr20 39583471 39583670 -32570212 - MIR SINE MIR -30 232 31 189 74 0 0 chr20 39585064 39585091 -32568791 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 551 271 33 20 chr20 39585091 39585242 -32568640 - L2 LINE L2 -13 3300 3148 1870 158 3 19 chr20 39585244 39585560 -32568322 + AluJo SINE Alu 1 311 -1 1809 78 0 0 chr20 39585603 39585834 -32568048 + AluSg1 SINE Alu 1 231 -78 216 0 0 0 chr20 39585848 39585872 -32568010 + (A)n Simple_repeat Simple_repeat 1 24 0 314 318 0 0 chr20 39585939 39586024 -32567858 + L3 LINE CR1 1428 1512 -65 306 235 78 0 chr20 39586330 39586432 -32567450 + MIR3 SINE MIR 61 170 -38 288 130 0 0 chr20 39586491 39586537 -32567345 + (TG)n Simple_repeat Simple_repeat 1 46 0 453 315 103 0 chr20 39586648 39586832 -32567050 - MIR SINE MIR -44 218 16 268 188 8 31 chr20 39587422 39587550 -32566332 + CT-rich Low_complexity Low_complexity 2 126 0 250 143 0 0 chr20 39587699 39587741 -32566141 + L2 LINE L2 3231 3272 0 313 352 8 8 chr20 39587946 39588074 -32565808 - MIR SINE MIR -61 147 20 718 162 0 27 chr20 39588754 39588939 -32564943 + (TG)n Simple_repeat Simple_repeat 1 180 0 717 143 29 6 chr20 39588960 39589135 -32564747 + (TG)n Simple_repeat Simple_repeat 2 180 0 204 202 69 58 chr20 39589135 39589246 -32564636 + L2 LINE L2 2879 2990 -282 273 322 45 68 chr20 39589279 39589456 -32564426 - MIR3 SINE MIR -7 201 29 267 288 144 9 chr20 39590185 39590296 -32563586 - MIR SINE MIR -118 144 19 469 266 18 0 chr20 39591220 39591333 -32562549 + MIR SINE MIR 87 201 -61 1182 184 137 3 chr20 39591351 39591644 -32562238 + L1MB5 LINE L1 5810 6143 -26 2130 119 0 10 chr20 39591644 39591956 -32561926 + AluSg SINE Alu 1 309 -1 377 343 127 0 chr20 39592082 39592263 -32561619 - MIR SINE MIR -9 253 50 1290 242 30 8 chr20 39592967 39593331 -32560551 - MER113 DNA MER1_type? -145 376 5 235 280 51 59 chr20 39593331 39593449 -32560433 + L2 LINE L2 2950 3066 -206 234 154 0 0 chr20 39593559 39593598 -32560284 - MER91 DNA MER1_type -99 41 3 209 329 105 14 chr20 39593598 39593739 -32560143 + L2 LINE L2 3093 3246 -26 456 288 120 11 chr20 39594401 39594592 -32559290 + MIR SINE MIR 30 241 -21 493 320 63 11 chr20 39594771 39594946 -32558936 + MIR SINE MIR 20 203 -59 195 138 0 0 chr20 39595372 39595401 -32558481 + MIR SINE MIR 223 251 -11 233 56 0 28 chr20 39595401 39595437 -32558445 + (TGAA)n Simple_repeat Simple_repeat 1 35 0 246 95 0 0 chr20 39595507 39595549 -32558333 + (ATTG)n Simple_repeat Simple_repeat 2 43 0 554 273 127 48 chr20 39596096 39596411 -32557471 - L2 LINE L2 -16 3297 2958 901 130 0 0 chr20 39596443 39596574 -32557308 - FRAM SINE Alu 0 40 1 1805 172 91 0 chr20 39596637 39597021 -32556861 - L1MB3 LINE L1 -7 6176 5758 596 285 134 0 chr20 39597638 39597817 -32556065 - MIR SINE MIR -14 248 46 591 255 70 19 chr20 39598408 39598565 -32555317 + MIR SINE MIR 48 212 -50 1869 135 0 55 chr20 39598569 39598880 -32555002 + AluJo SINE Alu 3 296 -16 2406 83 0 3 chr20 39598883 39599196 -32554686 + AluSq SINE Alu 1 312 -1 180 0 0 0 chr20 39599289 39599309 -32554573 + (CAG)n Simple_repeat Simple_repeat 1 20 0 200 238 0 0 chr20 39599429 39599471 -32554411 + L3 LINE CR1 1422 1463 -114 351 167 15 15 chr20 39599597 39599663 -32554219 + MIR SINE MIR 82 147 -61 369 310 58 12 chr20 39599939 39600110 -32553772 - MIR3 SINE MIR -21 187 9 254 321 70 21 chr20 39600411 39600598 -32553284 + L2 LINE L2 2904 3099 -173 2197 113 0 0 chr20 39600673 39600974 -32552908 - AluSq SINE Alu -12 301 1 264 56 0 0 chr20 39601005 39601041 -32552841 + Alu SINE Alu 1 36 -266 855 104 97 0 chr20 39601041 39601175 -32552707 + AluSc SINE Alu 156 302 -7 559 90 13 0 chr20 39601178 39601256 -32552626 + MADE1 DNA Mariner 1 79 -1 249 303 109 25 chr20 39601290 39601411 -32552471 + MIR SINE MIR 20 148 -72 902 185 43 79 chr20 39601468 39601586 -32552296 + MER33 DNA MER1_type 30 151 -2434 2090 120 10 0 chr20 39601586 39601877 -32552005 - AluSx SINE Alu -18 294 1 902 185 43 79 chr20 39601877 39602061 -32551821 + MER33 DNA MER1_type 151 321 -3 182 338 26 0 chr20 39602214 39602291 -32551591 + MIR3 SINE MIR 81 159 -49 239 288 45 45 chr20 39602529 39602640 -32551242 + MIR SINE MIR 36 146 -116 291 132 13 145 chr20 39603055 39603080 -32550802 - L2 LINE L2 0 3313 3286 1761 158 3 20 chr20 39603080 39603377 -32550505 + AluJo SINE Alu 1 292 -20 291 132 13 145 chr20 39603377 39603427 -32550455 - L2 LINE L2 -27 3286 3248 601 253 20 113 chr20 39603441 39603469 -32550413 - L2 LINE L2 -186 3127 3098 986 188 64 30 chr20 39603469 39603671 -32550211 - MER3 DNA MER1_type 0 209 1 601 253 20 113 chr20 39603671 39603942 -32549940 - L2 LINE L2 -215 3098 2856 429 200 12 0 chr20 39603985 39604065 -32549817 - AluJb SINE Alu -43 269 189 353 159 0 16 chr20 39604066 39604129 -32549753 + AluJ/FLAM SINE Alu 2 63 -239 956 276 43 8 chr20 39604129 39604499 -32549383 - L2 LINE L2 -536 2778 2396 390 301 54 18 chr20 39605555 39605721 -32548161 - L2 LINE L2 -219 3053 2882 258 282 13 0 chr20 39605746 39605824 -32548058 - L2 LINE L2 -557 2757 2679 189 342 60 8 chr20 39606638 39606755 -32547127 - MIR3 SINE MIR -12 196 74 1371 242 66 8 chr20 39606995 39607388 -32546494 + LTR16C LTR ERVL 76 491 0 442 257 99 29 chr20 39607572 39607743 -32546139 - LTR16C LTR ERVL -304 187 5 393 310 118 15 chr20 39608630 39608833 -32545049 - MIR SINE MIR -37 225 2 219 240 0 0 chr20 39609109 39609159 -32544723 + (TG)n Simple_repeat Simple_repeat 2 51 0 531 285 186 49 chr20 39610055 39610441 -32543441 + L2 LINE L2 2828 3266 -6 2009 120 0 36 chr20 39610497 39610806 -32543076 - AluSq SINE Alu -13 300 3 305 315 19 0 chr20 39610960 39611068 -32542814 - Charlie8 DNA MER1_type -2273 144 35 183 125 62 0 chr20 39611314 39611346 -32542536 + MIR SINE MIR 41 74 -134 1727 126 12 0 chr20 39611555 39611802 -32542080 + AluSx SINE Alu 2 251 -61 191 36 36 0 chr20 39611838 39611866 -32542016 + (TAA)n Simple_repeat Simple_repeat 1 29 0 328 286 0 0 chr20 39611866 39611943 -32541939 - MIR SINE MIR -2 260 184 453 313 52 60 chr20 39612277 39612526 -32541356 - L2 LINE L2 -57 3215 2969 392 174 306 0 chr20 39613624 39613722 -32540160 + MIR SINE MIR 65 192 -70 1970 129 0 43 chr20 39613735 39614061 -32539821 + AluJo SINE Alu 1 312 0 22 0 0 0 chr20 39614150 39614172 -32539710 + AT_rich Low_complexity Low_complexity 1 22 0 210 216 0 59 chr20 39614354 39614405 -32539477 + L2 LINE L2 3265 3312 -1 394 288 27 18 chr20 39615151 39615262 -32538620 + MIR SINE MIR 32 143 -65 1596 156 60 26 chr20 39615275 39615627 -32538255 - THE1C LTR MaLR -11 364 1 550 270 214 34 chr20 39615706 39616061 -32537821 - L2 LINE L2 -1 3312 2894 229 248 88 18 chr20 39616513 39616626 -32537256 - L1MD3 LINE L1 0 7995 7875 1065 287 76 21 chr20 39616657 39616812 -32537070 + L1ME3 LINE L1 5679 5824 -338 2044 130 17 0 chr20 39616812 39617105 -32536777 + AluSq SINE Alu 1 298 -15 1065 287 76 21 chr20 39617105 39617410 -32536472 + L1ME3 LINE L1 5824 6162 0 856 138 6 60 chr20 39617545 39617567 -32536315 - AluJo/FRAM SINE Alu -1 311 289 2060 105 0 43 chr20 39617567 39617891 -32535991 - AluSx SINE Alu -2 310 1 856 138 6 60 chr20 39617891 39618035 -32535847 - AluJo/FRAM SINE Alu -23 289 154 189 0 0 0 chr20 39618040 39618061 -32535821 + (T)n Simple_repeat Simple_repeat 1 21 0 27 0 0 0 chr20 39618782 39618809 -32535073 + GC_rich Low_complexity Low_complexity 1 27 0 2098 123 0 10 chr20 39620411 39620713 -32533169 - AluSc SINE Alu -9 300 2 974 128 0 0 chr20 39620734 39620867 -32533015 - AluSq/x SINE Alu -179 133 1 1166 132 6 0 chr20 39620921 39621095 -32532787 - L1PA10 LINE L1 0 6168 5994 610 276 86 52 chr20 39621105 39621395 -32532487 - L1ME3A LINE L1 -202 5968 5669 373 235 167 8 chr20 39621417 39621549 -32532333 - MIR SINE MIR -31 231 79 214 315 82 0 chr20 39621880 39621953 -32531929 - MIR SINE MIR -76 186 108 200 128 51 0 chr20 39621957 39621996 -32531886 + (TGGA)n Simple_repeat Simple_repeat 2 42 0 356 274 10 0 chr20 39622439 39622541 -32531341 + MIR SINE MIR 45 147 -115 4527 160 5 23 chr20 39622546 39622924 -32530958 + L1MB8 LINE L1 5412 5770 -408 2045 96 0 105 chr20 39622924 39623256 -32530626 + AluSc SINE Alu 3 299 -10 4527 160 5 23 chr20 39623256 39623655 -32530227 + L1MB8 LINE L1 5770 6175 -3 1914 135 38 0 chr20 39623843 39624131 -32529751 - AluSx SINE Alu -13 299 1 737 247 4 54 chr20 39624386 39624415 -32529467 - L1ME LINE L1 -301 5803 5774 2376 158 57 10 chr20 39624415 39624820 -32529062 - MSTB LTR MaLR -2 424 1 737 247 4 54 chr20 39624820 39625029 -32528853 - L1ME LINE L1 -330 5774 5577 1384 148 0 14 chr20 39625032 39625241 -32528641 - AluJo SINE Alu -25 287 82 484 249 53 120 chr20 39625340 39625512 -32528370 - L1ME LINE L1 -2201 5590 5445 2372 81 3 0 chr20 39625512 39625807 -32528075 - AluSp SINE Alu -17 296 1 484 249 53 120 chr20 39625807 39625935 -32527947 - L1ME LINE L1 -2346 5445 5310 244 293 110 45 chr20 39626171 39626553 -32527329 - L1ME LINE L1 -1170 4959 4553 1694 152 107 0 chr20 39626586 39626856 -32527026 - AluSx SINE Alu -13 299 1 2114 114 21 0 chr20 39626926 39627216 -32526666 + AluSx SINE Alu 1 296 -16 1329 113 173 49 chr20 39627501 39627698 -32526184 + LTR51 LTR ERV1 26 266 -405 2200 123 0 3 chr20 39627698 39628008 -32525874 - AluSx SINE Alu -3 309 1 1329 113 173 49 chr20 39628008 39628076 -32525806 + LTR51 LTR ERV1 266 324 -347 2192 101 0 0 chr20 39628180 39628477 -32525405 + AluSc SINE Alu 1 297 -12 1951 141 47 32 chr20 39628484 39628566 -32525316 + LTR51 LTR ERV1 326 405 -266 2075 99 32 0 chr20 39628566 39628850 -32525032 + AluSx SINE Alu 1 293 -19 1951 141 47 32 chr20 39628850 39629108 -32524774 + LTR51 LTR ERV1 405 671 0 2219 115 0 33 chr20 39629219 39629550 -32524332 - MER1B DNA MER1_type 0 339 20 455 279 31 31 chr20 39629685 39629846 -32524036 - L1ME LINE L1 -1931 4198 4038 334 254 94 43 chr20 39630117 39630255 -32523627 + MIR SINE MIR 4 148 -114 2193 112 0 0 chr20 39630370 39630665 -32523217 - AluSq SINE Alu -18 295 1 184 299 156 0 chr20 39630909 39630986 -32522896 - L3 LINE CR1 -5 1572 1484 240 273 25 19 chr20 39631063 39631166 -32522716 + CT-rich Low_complexity Low_complexity 1 103 0 2173 171 33 71 chr20 39631301 39631821 -32522061 + Charlie4a DNA MER1_type 9 508 0 522 288 101 42 chr20 39631974 39632332 -32521550 + MLT1L LTR MaLR 227 605 -10 479 320 185 38 chr20 39632451 39632553 -32521329 - L3 LINE CR1 -351 1226 1140 1107 161 5 55 chr20 39632553 39632752 -32521130 - MER5A DNA MER1_type 0 189 1 2491 74 0 3 chr20 39632755 39633064 -32520818 + AluY SINE Alu 1 308 -3 479 320 185 38 chr20 39633064 39633638 -32520244 - L3 LINE CR1 -438 1139 446 573 275 45 17 chr20 39634100 39634431 -32519451 - L1ME LINE L1 -3699 2430 2090 1840 144 68 74 chr20 39634591 39634930 -32518952 + MER1B DNA MER1_type 1 337 0 2115 125 7 3 chr20 39635105 39635402 -32518480 - AluSq SINE Alu -15 298 1 440 327 98 20 chr20 39635515 39635821 -32518061 - L1ME LINE L1 -4501 1628 1299 570 253 31 35 chr20 39635871 39636100 -32517782 - L1ME LINE L1 -4917 1202 975 487 110 0 88 chr20 39636148 39636163 -32517719 - Alu SINE Alu 0 310 295 2375 90 0 3 chr20 39636163 39636473 -32517409 - AluY SINE Alu -2 309 1 487 110 0 88 chr20 39636473 39636548 -32517334 - Alu SINE Alu -15 295 228 2781 32 0 0 chr20 39636623 39636934 -32516948 + AluYb8 SINE Alu 2 312 -6 248 51 0 0 chr20 39637145 39637184 -32516698 - Alu SINE Alu 0 301 263 1414 193 37 0 chr20 39637487 39637782 -32516100 - L1ME1 LINE L1 -4 6162 5857 23 0 0 0 chr20 39637782 39637805 -32516077 + AT_rich Low_complexity Low_complexity 1 23 0 6029 139 35 12 chr20 39637805 39638434 -32515448 - L1PB1 LINE L1 -1 6150 5537 189 0 0 0 chr20 39638434 39638455 -32515427 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 6029 139 35 12 chr20 39638455 39639661 -32514221 - L1PB1 LINE L1 -614 5537 3844 201 162 0 27 chr20 39640586 39640623 -32513259 + CT-rich Low_complexity Low_complexity 2 37 0 2076 142 6 3 chr20 39640626 39640937 -32512945 - AluJb SINE Alu 0 312 1 275 263 83 23 chr20 39640937 39641070 -32512812 - MIR SINE MIR -59 203 63 213 277 31 15 chr20 39641454 39641519 -32512363 - MIR SINE MIR -160 102 37 248 130 0 13 chr20 39641665 39641715 -32512167 - MIR SINE MIR -102 160 113 2318 206 112 8 chr20 39641728 39642256 -32511626 - MER119 DNA MER1_type 0 583 1 202 339 0 0 chr20 39642417 39642476 -32511406 + L2 LINE L2 3213 3271 -1 215 189 0 0 chr20 39645377 39645414 -32508468 - L3 LINE CR1 -180 1397 1361 272 262 89 63 chr20 39645427 39645618 -32508264 + L1ME3A LINE L1 5968 6163 -7 186 103 0 0 chr20 39646875 39646904 -32506978 + (A)n Simple_repeat Simple_repeat 1 29 0 204 333 43 75 chr20 39647058 39647151 -32506731 - L2 LINE L2 -44 3228 3139 347 279 93 19 chr20 39647269 39647430 -32506452 - L1ME1 LINE L1 -267 5854 5682 970 151 125 31 chr20 39647453 39647645 -32506237 - MER6B DNA MER2_type 0 210 1 356 241 70 70 chr20 39648603 39648790 -32505092 + MIR SINE MIR 2 188 -74 321 297 89 20 chr20 39648854 39648955 -32504927 - L2 LINE L2 -49 3223 3116 418 118 237 11 chr20 39649153 39649246 -32504636 - L1ME1 LINE L1 -5 6161 6048 1787 150 64 13 chr20 39649246 39649619 -32504263 - Charlie5 DNA MER1_type 0 2624 2233 523 246 78 0 chr20 39649628 39649770 -32504112 - MER3 DNA MER1_type -41 168 16 937 169 0 31 chr20 39649774 39649934 -32503948 - AluJb SINE Alu -157 155 1 14614 137 31 14 chr20 39649935 39653189 -32500693 - L1 LINE L1 -2837 4728 1417 308 262 39 19 chr20 39653233 39653336 -32500546 + L1MC4 LINE L1 6599 6703 -1339 815 218 83 6 chr20 39653848 39654004 -32499878 - FAM SINE Alu -12 173 6 2810 7 0 0 chr20 39654067 39654367 -32499515 - AluYa5 SINE Alu -11 300 1 248 289 84 12 chr20 39654946 39655029 -32498853 + L2 LINE L2 3132 3220 -52 3065 205 91 20 chr20 39657514 39658315 -32495567 - L1ME1 LINE L1 -44 6191 5334 1865 146 29 0 chr20 39658348 39658623 -32495259 + MER1B DNA MER1_type 57 339 0 275 219 143 0 chr20 39658650 39658769 -32495113 - L1ME1 LINE L1 -913 5302 5167 * 760 199 107 26 chr20 39658768 39659040 -32494842 - L1ME1 LINE L1 -2736 3479 3186 189 121 0 0 chr20 39659046 39659079 -32494803 + (TG)n Simple_repeat Simple_repeat 2 34 0 627 244 0 0 chr20 39659081 39659196 -32494686 - FLAM_A SINE Alu -18 115 1 1150 152 37 5 chr20 39659260 39659451 -32494431 + MER46A DNA MER2_type 36 232 -4 3146 190 41 11 chr20 39659490 39660200 -32493682 - L1ME1 LINE L1 -3121 3094 2364 424 155 91 35 chr20 39660211 39660330 -32493552 + MLT1B LTR MaLR 1 145 -240 1105 234 24 70 chr20 39660368 39660504 -32493378 - L1ME1 LINE L1 -4411 1985 1844 2419 87 0 0 chr20 39660504 39660802 -32493080 - AluSg SINE Alu -12 298 1 1105 234 24 70 chr20 39660802 39661037 -32492845 - L1ME1 LINE L1 -4552 1844 1631 1193 131 0 0 chr20 39661038 39661206 -32492676 - AluSg/x SINE Alu -10 302 135 1975 141 6 28 chr20 39661206 39661525 -32492357 - AluSx SINE Alu 0 312 1 402 269 115 75 chr20 39661526 39661857 -32492025 - L1ME1 LINE L1 -4619 1596 1253 1019 183 0 83 chr20 39661859 39662088 -32491794 - AluJb SINE Alu -13 299 90 2768 216 179 36 chr20 39662197 39663254 -32490628 - L1ME1 LINE L1 -5153 1243 36 233 296 23 11 chr20 39663270 39663358 -32490524 - L1M4 LINE L1 -1773 4373 4285 787 279 72 10 chr20 39663375 39663665 -32490217 - MLT1I LTR MaLR -4 405 98 569 254 25 0 chr20 39663704 39663822 -32490060 - MER63A DNA MER1_type -1 209 89 21 0 0 0 chr20 39664078 39664099 -32489783 + AT_rich Low_complexity Low_complexity 1 21 0 372 314 105 73 chr20 39664505 39664932 -32488950 + L2 LINE L2 2832 3272 0 283 328 92 65 chr20 39665825 39666456 -32487426 + L2 LINE L2 2570 3250 -22 327 261 136 0 chr20 39666571 39666659 -32487223 + MER81 DNA DNA 1 100 -14 552 273 130 68 chr20 39667529 39667851 -32486031 + L2 LINE L2 2879 3220 -93 1982 217 70 5 chr20 39668351 39668793 -32485089 + L1M4 LINE L1 3906 4376 -1770 2539 139 67 17 chr20 39668793 39669254 -32484628 + L1MB8 LINE L1 5694 6177 -1 307 289 143 15 chr20 39669254 39669500 -32484382 - L1ME4a LINE L1 -55 6066 5782 202 301 96 44 chr20 39671030 39671166 -32482716 - MIR SINE MIR -4 258 116 * 317 265 88 48 chr20 39671143 39671290 -32482592 + MIR3 SINE MIR 21 173 -35 290 304 156 74 chr20 39671996 39672114 -32481768 + L2 LINE L2 2906 3013 -259 2197 108 29 7 chr20 39672114 39672420 -32481462 - AluSq SINE Alu 0 313 1 290 304 156 74 chr20 39672420 39672640 -32481242 + L2 LINE L2 3013 3272 0 3557 154 72 11 chr20 39673101 39673730 -32480152 - LTR51 LTR ERV1 0 671 5 436 322 41 0 chr20 39673849 39674020 -32479862 + MIR SINE MIR 63 240 -22 209 340 188 5 chr20 39675379 39675799 -32478083 + L2 LINE L2 2150 2646 -668 261 322 87 27 chr20 39676129 39676278 -32477604 - MIR SINE MIR -55 207 50 313 217 0 0 chr20 39676525 39676585 -32477297 + L2 LINE L2 3213 3272 0 193 291 145 8 chr20 39676751 39676842 -32477040 + MIR SINE MIR 124 236 -26 1414 225 105 19 chr20 39676842 39677260 -32476622 - MSTB2 LTR MaLR 0 457 4 193 291 145 8 chr20 39677260 39677285 -32476597 + MIR SINE MIR 236 256 -6 682 275 0 35 chr20 39677515 39677744 -32476138 + MIR SINE MIR 15 235 -27 344 268 113 42 chr20 39678779 39678992 -32474890 + MIR SINE MIR 32 259 -3 347 292 58 15 chr20 39679769 39679906 -32473976 - MER5A DNA MER1_type 0 189 47 256 277 10 69 chr20 39679992 39680093 -32473789 + MIR SINE MIR 161 255 -7 566 229 30 32 chr20 39680706 39680884 -32472998 - MIR SINE MIR -56 206 34 253 230 198 16 chr20 39681316 39681442 -32472440 - MER5B DNA MER1_type -2 176 28 314 236 65 8 chr20 39681639 39681762 -32472120 - L1ME4a LINE L1 -3 6118 5989 282 29 0 0 chr20 39681795 39681830 -32472052 + (TG)n Simple_repeat Simple_repeat 2 36 0 2374 93 0 0 chr20 39682039 39682341 -32471541 - AluSq SINE Alu -11 302 1 270 240 102 79 chr20 39683100 39683294 -32470588 + MIR3 SINE MIR 7 212 -50 325 202 112 0 chr20 39684251 39684340 -32469542 + MIR SINE MIR 40 138 -124 567 190 177 32 chr20 39684340 39684498 -32469384 - MER5A DNA MER1_type 0 189 9 183 233 68 41 chr20 39684506 39684579 -32469303 + MIR SINE MIR 131 205 -57 6118 142 20 16 chr20 39685343 39686416 -32467466 + Ricksha_a DNA DNA 2 1123 -58 2277 109 0 7 chr20 39686596 39686900 -32466982 - AluSx SINE Alu -10 302 1 1729 168 46 32 chr20 39687206 39687576 -32466306 + THE1C LTR MaLR 1 375 0 490 244 91 28 chr20 39688131 39688307 -32465575 - L1MC5 LINE L1 -36 7925 7739 757 233 33 17 chr20 39688455 39688635 -32465247 - MER20 DNA MER1_type 0 219 37 442 271 68 17 chr20 39689422 39689599 -32464283 + MIR SINE MIR 65 250 -12 658 244 45 65 chr20 39691255 39691456 -32462426 - MLT1J LTR MaLR 0 511 315 189 236 91 18 chr20 39691456 39691511 -32462371 + L2 LINE L2 3214 3272 -41 792 209 78 119 chr20 39691528 39691794 -32462088 - MLT1J LTR MaLR -202 309 34 2271 131 0 0 chr20 39691794 39692106 -32461776 + AluSx SINE Alu 1 312 0 2259 116 0 0 chr20 39692116 39692409 -32461473 + AluSq SINE Alu 1 293 -20 792 209 78 119 chr20 39692409 39692451 -32461431 - MLT1J LTR MaLR -486 25 3 417 251 41 78 chr20 39693343 39693562 -32460320 - L1MC4 LINE L1 -3 8039 7829 1803 176 104 35 chr20 39693598 39694084 -32459798 - L1ME2 LINE L1 -19 6143 5611 418 251 43 49 chr20 39694122 39694285 -32459597 - MIR3 SINE MIR -24 184 23 214 365 26 9 chr20 39694648 39694763 -32459119 + L2 LINE L2 2906 3022 -250 594 249 51 17 chr20 39695194 39695371 -32458511 + MIR SINE MIR 69 251 -11 1799 158 0 7 chr20 39696573 39696845 -32457037 - AluJb SINE Alu -30 282 13 630 134 67 40 chr20 39696865 39697014 -32456868 - L1MA9 LINE L1 0 6312 6160 2253 133 19 17 chr20 39697349 39697711 -32456171 - MER47A DNA MER2_type -3 363 1 2349 106 0 3 chr20 39698077 39698389 -32455493 - AluY SINE Alu 0 311 1 227 304 0 0 chr20 39698450 39698506 -32455376 + L2 LINE L2 3193 3248 -24 324 282 20 12 chr20 39699197 39699314 -32454568 - MIR SINE MIR -62 146 30 222 341 82 0 chr20 39699806 39699941 -32453941 + MIR3 SINE MIR 42 187 -21 189 171 0 0 chr20 39700292 39700327 -32453555 + (TG)n Simple_repeat Simple_repeat 2 36 0 436 325 52 20 chr20 39701365 39701617 -32452265 + MIR SINE MIR 3 262 0 433 141 28 0 chr20 39701861 39701932 -32451950 + MLT2B2 LTR ERVL 1 73 -442 * 987 173 46 0 chr20 39701929 39702102 -32451780 + MLT2B1 LTR ERVL 340 520 0 871 292 33 64 chr20 39702102 39702557 -32451325 + L1MC/D LINE L1 5377 5817 -1991 249 313 86 76 chr20 39703063 39703472 -32450410 + L2 LINE L2 2842 3254 -18 333 291 135 7 chr20 39703473 39703614 -32450268 + MIR3 SINE MIR 35 193 -15 1208 239 67 37 chr20 39704499 39704905 -32448977 - L2 LINE L2 -3 3310 2893 * 1875 241 76 38 chr20 39704902 39705329 -32448553 - L2 LINE L2 -538 2776 2314 1895 151 24 7 chr20 39705329 39705627 -32448255 + AluJb SINE Alu 1 303 -9 1875 241 76 38 chr20 39705627 39705858 -32448024 - L2 LINE L2 -1000 2314 2093 363 272 160 24 chr20 39707212 39707381 -32446501 + MIR SINE MIR 1 192 -70 215 309 15 0 chr20 39707863 39707931 -32445951 - MIR SINE MIR -104 158 90 247 268 28 0 chr20 39708032 39708103 -32445779 + MIR SINE MIR 73 145 -117 232 263 25 12 chr20 39709542 39709622 -32444260 - MIR3 SINE MIR -24 184 104 251 274 142 9 chr20 39710955 39711068 -32442814 + MIR SINE MIR 17 144 -64 282 286 51 0 chr20 39711256 39711354 -32442528 + MIR SINE MIR 68 170 -92 1796 151 0 4 chr20 39711423 39711688 -32442194 + AluSx SINE Alu 36 299 -13 238 281 112 12 chr20 39713396 39713607 -32440275 + L2 LINE L2 2795 3087 -226 2141 123 0 19 chr20 39714870 39715179 -32438703 - AluJo SINE Alu -9 303 1 325 257 29 43 chr20 39715400 39715561 -32438321 + MIR SINE MIR 35 192 -70 566 319 103 35 chr20 39715593 39716136 -32437746 + L2 LINE L2 2271 2850 -464 199 351 0 0 chr20 39716324 39716381 -32437501 - L2 LINE L2 -6 3307 3251 865 278 12 4 chr20 39716474 39716715 -32437167 + MIR SINE MIR 20 262 0 575 261 37 53 chr20 39718303 39718548 -32435334 + MIR SINE MIR 22 262 0 281 348 30 0 chr20 39719390 39719554 -32434328 - MER117 DNA MER1_type -28 169 1 352 313 35 0 chr20 39719554 39719669 -32434213 - MIR3 SINE MIR -48 160 42 438 233 106 58 chr20 39721174 39721275 -32432607 + MIR SINE MIR 50 145 -117 1943 138 3 0 chr20 39721275 39721612 -32432270 - AluSx SINE Alu 0 338 1 438 233 106 58 chr20 39721612 39721698 -32432184 + MIR SINE MIR 145 247 -15 336 259 131 122 chr20 39721922 39722265 -32431617 + L2 LINE L2 2927 3272 0 1634 105 0 0 chr20 39722678 39722887 -32430995 + AluSq SINE Alu 1 209 -104 363 94 0 0 chr20 39722887 39722940 -32430942 + AluSq SINE Alu 247 299 -4 1661 183 16 29 chr20 39724632 39724938 -32428944 + AluJb SINE Alu 1 302 -10 551 154 145 0 chr20 39725323 39725440 -32428442 + L1MB8 LINE L1 6036 6169 -9 207 0 0 0 chr20 39725444 39725467 -32428415 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 491 200 0 0 chr20 39725733 39725813 -32428069 - Tigger5 DNA MER2_type 0 2323 2244 2137 97 62 0 chr20 39725817 39726106 -32427776 + AluSp SINE Alu 2 308 -5 301 211 8 42 chr20 39726110 39726222 -32427660 - Tigger5 DNA MER2_type -2131 192 28 1786 116 70 52 chr20 39727432 39727760 -32426122 + MER44D DNA MER2_type 6 609 0 196 239 22 0 chr20 39727897 39727943 -32425939 + L2 LINE L2 3209 3255 -17 220 256 51 39 chr20 39728209 39728287 -32425595 + MIR3 SINE MIR 82 160 -48 297 252 68 39 chr20 39728385 39728488 -32425394 + MIR SINE MIR 16 121 -141 510 205 43 60 chr20 39729615 39729800 -32424082 + L2 LINE L2 3117 3298 -15 190 203 144 93 chr20 39729844 39729962 -32423920 - L2 LINE L2 -12 3260 3137 290 292 62 0 chr20 39730026 39730122 -32423760 - L2 LINE L2 -31 3241 3140 452 142 108 8 chr20 39732168 39732287 -32421595 - L1MB3 LINE L1 -102 6081 5941 524 306 56 13 chr20 39733074 39733306 -32420576 + MIR SINE MIR 17 258 -4 231 238 0 48 chr20 39733378 39733441 -32420441 + MIR SINE MIR 81 140 -122 228 135 0 0 chr20 39734414 39734451 -32419431 + (CA)n Simple_repeat Simple_repeat 2 38 0 325 269 154 22 chr20 39735047 39735229 -32418653 + MIR SINE MIR 51 256 -6 251 238 12 48 chr20 39736053 39736101 -32417781 + MIR SINE MIR 66 111 -97 1231 137 164 55 chr20 39736101 39736393 -32417489 - MER33 DNA MER1_type 0 324 1 251 238 12 48 chr20 39736393 39736428 -32417454 + MIR SINE MIR 111 146 -62 407 309 25 25 chr20 39737191 39737353 -32416529 + MIR SINE MIR 47 208 -54 260 258 62 41 chr20 39737475 39737572 -32416310 - MIR SINE MIR -76 132 34 857 160 24 173 chr20 39737631 39737884 -32415998 + MER33 DNA MER1_type 1 180 -2405 1634 181 50 0 chr20 39737884 39738166 -32415716 - AluJo SINE Alu -10 302 7 857 160 24 173 chr20 39738166 39738293 -32415589 + MER33 DNA MER1_type 180 324 0 818 250 52 16 chr20 39738293 39738545 -32415337 + MIR SINE MIR 2 262 0 767 271 77 58 chr20 39738774 39738973 -32414909 - L2 LINE L2 0 3313 3119 1153 152 28 121 chr20 39738973 39739114 -32414768 + MER33 DNA MER1_type 2 155 -2430 2462 81 3 0 chr20 39739114 39739421 -32414461 - AluSp SINE Alu -5 308 1 1153 152 28 121 chr20 39739421 39739578 -32414304 + MER33 DNA MER1_type 155 264 -2321 2398 104 0 3 chr20 39739578 39739886 -32413996 + AluSp SINE Alu 1 307 -6 1153 152 28 121 chr20 39739886 39739941 -32413941 + MER33 DNA MER1_type 264 323 -1 767 271 77 58 chr20 39739941 39740276 -32413606 - L2 LINE L2 -194 3119 2772 272 355 43 7 chr20 39740275 39740413 -32413469 - MIR3 SINE MIR -28 180 38 * 286 330 96 0 chr20 39740427 39740615 -32413267 - MIR SINE MIR -56 206 1 1991 168 0 0 chr20 39741442 39741752 -32412130 + AluJb SINE Alu 1 310 -2 731 226 45 6 chr20 39741817 39741994 -32411888 - MIR SINE MIR -77 185 2 366 294 65 27 chr20 39741997 39742181 -32411701 - MIR SINE MIR -24 238 48 411 145 72 0 chr20 39742379 39742462 -32411420 - MER5A DNA MER1_type -68 121 33 454 232 53 8 chr20 39742585 39742717 -32411165 + MIR3 SINE MIR 65 202 -6 494 305 12 36 chr20 39742781 39742948 -32410934 + MIR3 SINE MIR 30 192 -16 327 375 49 9 chr20 39743799 39744023 -32409859 - L1MC4a LINE L1 -1903 5905 5673 719 168 0 46 chr20 39744728 39744859 -32409023 - FLAM_C SINE Alu -8 125 1 1235 183 186 3 chr20 39745773 39746084 -32407798 - L1MD3 LINE L1 -10 7985 7618 2297 94 27 0 chr20 39746456 39746755 -32407127 - AluSp SINE Alu -6 307 1 201 256 0 0 chr20 39746851 39746890 -32406992 - L2 LINE L2 -89 3183 3145 1826 161 14 0 chr20 39747115 39747401 -32406481 + AluJo SINE Alu 5 294 -18 698 204 20 146 chr20 39747794 39748088 -32405794 + MIR SINE MIR 4 260 -2 22 0 0 0 chr20 39748140 39748162 -32405720 + AT_rich Low_complexity Low_complexity 1 22 0 14819 122 45 9 chr20 39748598 39750607 -32403275 - Tigger1 DNA MER2_type -2 2416 480 204 40 0 0 chr20 39750607 39750632 -32403250 + (GA)n Simple_repeat Simple_repeat 1 25 0 14819 122 45 9 chr20 39750632 39750864 -32403018 - Tigger1 DNA MER2_type -1938 480 258 1837 150 52 0 chr20 39750864 39751150 -32402732 - AluJb SINE Alu -11 301 1 14819 122 45 9 chr20 39751150 39751240 -32402642 - Tigger1 DNA MER2_type -2160 258 1 2376 90 3 0 chr20 39751535 39751834 -32402048 + AluSc SINE Alu 1 300 -9 242 274 75 38 chr20 39752598 39752704 -32401178 - MIR3 SINE MIR -43 165 56 773 290 116 48 chr20 39754087 39754713 -32399169 - L2 LINE L2 -1 3312 2654 515 302 23 0 chr20 39756540 39756712 -32397170 - MIR SINE MIR -24 238 63 219 348 62 5 chr20 39756817 39756971 -32396911 + L2 LINE L2 3072 3312 -1 244 242 198 11 chr20 39757563 39757654 -32396228 - MIR SINE MIR -135 127 20 402 311 66 33 chr20 39757901 39758113 -32395769 + MIR SINE MIR 41 259 -3 7233 58 6 34 chr20 39760285 39761266 -32392616 - SVA Other Other 0 1386 433 268 230 180 30 chr20 39761606 39761706 -32392176 + MIR3 SINE MIR 44 158 -50 1649 161 13 30 chr20 39762508 39762692 -32391190 - AluJb SINE Alu -1 311 132 2303 81 0 17 chr20 39762692 39763006 -32390876 - AluY SINE Alu 0 311 1 1649 161 13 30 chr20 39763006 39763126 -32390756 - AluJb SINE Alu -180 132 12 26 30 0 0 chr20 39763168 39763201 -32390681 + AT_rich Low_complexity Low_complexity 1 33 0 262 346 53 60 chr20 39763450 39763733 -32390149 - L2 LINE L2 -25 3247 2967 626 271 80 44 chr20 39764481 39764841 -32389041 - L1ME LINE L1 -469 5701 5325 2043 139 0 0 chr20 39764870 39765203 -32388679 + AluSx SINE Alu 1 333 0 210 94 0 0 chr20 39766403 39766435 -32387447 - MIR SINE MIR -74 188 157 187 346 47 19 chr20 39767111 39767322 -32386560 + L3 LINE CR1 1317 1533 -44 1971 142 20 3 chr20 39767587 39767883 -32385999 - AluJo SINE Alu -9 303 3 1962 131 3 13 chr20 39767979 39768277 -32385605 - AluSq SINE Alu -18 295 1 2150 139 0 0 chr20 39768380 39768683 -32385199 + AluSx SINE Alu 1 303 -9 298 339 73 16 chr20 39768738 39768862 -32385020 - MIR SINE MIR -110 152 22 238 219 83 83 chr20 39769133 39769229 -32384653 + MIR3 SINE MIR 89 184 -24 1559 162 70 7 chr20 39770783 39771099 -32382783 + MER33 DNA MER1_type 1 318 -6 313 266 138 9 chr20 39771104 39771213 -32382669 + L2 LINE L2 3150 3272 0 287 261 45 45 chr20 39773139 39773273 -32380609 - MIR SINE MIR -109 153 20 799 212 0 0 chr20 39773374 39773506 -32380376 + FLAM_A SINE Alu 1 132 -1 204 327 80 9 chr20 39773525 39773638 -32380244 + MIR3 SINE MIR 1 121 -87 24 32 0 0 chr20 39773638 39773669 -32380213 + AT_rich Low_complexity Low_complexity 1 31 0 5660 140 27 14 chr20 39773670 39773917 -32379965 - L1MA7 LINE L1 0 6291 6049 2553 57 3 0 chr20 39773917 39774213 -32379669 - AluSp SINE Alu -16 297 1 5660 140 27 14 chr20 39774213 39774921 -32378961 - L1MA7 LINE L1 -242 6049 5323 1003 97 0 8 chr20 39775377 39775511 -32378371 - AluJb SINE Alu -179 133 1 353 286 36 0 chr20 39775795 39775907 -32377975 + MIR SINE MIR 85 200 -62 191 309 69 106 chr20 39775980 39776197 -32377685 - L2 LINE L2 -213 3059 2851 1063 260 91 44 chr20 39776212 39776619 -32377263 + L2 LINE L2 2888 3313 0 210 71 0 0 chr20 39777880 39777908 -32375974 + (TCCCC)n Simple_repeat Simple_repeat 3 30 0 238 235 0 0 chr20 39777912 39777963 -32375919 - L2 LINE L2 -1 3271 3221 196 244 37 49 chr20 39778027 39778109 -32375773 - L2 LINE L2 -473 2841 2761 438 274 0 0 chr20 39778937 39779021 -32374861 - MER58 DNA MER1_type -2336 84 1 234 159 45 0 chr20 39779168 39779212 -32374670 + L2 LINE L2 3268 3313 0 1684 126 77 0 chr20 39779222 39779469 -32374413 - AluSx SINE Alu -15 297 32 2272 105 0 3 chr20 39779620 39779926 -32373956 + AluY SINE Alu 1 305 -6 1558 260 85 30 chr20 39780255 39780786 -32373096 - MER68 LTR ERV1 0 562 3 604 236 76 0 chr20 39780903 39781060 -32372822 + MIR SINE MIR 89 257 -5 258 381 42 18 chr20 39781412 39781580 -32372302 - L2 LINE L2 -224 3048 2877 351 0 0 0 chr20 39781757 39781796 -32372086 + (TG)n Simple_repeat Simple_repeat 2 40 0 804 284 128 25 chr20 39781965 39782373 -32371509 - L1MC4a LINE L1 -1897 5911 5462 219 306 149 8 chr20 39782381 39782502 -32371380 + L2 LINE L2 3115 3252 -20 366 179 30 0 chr20 39783280 39783347 -32370535 - Charlie1 DNA MER1_type -4 2757 2689 * 1342 147 16 52 chr20 39783344 39783595 -32370287 - Charlie1 DNA MER1_type -2519 242 1 299 214 43 0 chr20 39784041 39784111 -32369771 - MIR SINE MIR -13 249 177 425 247 34 0 chr20 39784275 39784364 -32369518 + L2 LINE L2 3209 3300 -13 265 262 12 34 chr20 39784362 39784453 -32369429 - MIR SINE MIR -110 98 20 * 343 286 161 6 chr20 39784604 39784765 -32369117 - L3 LINE CR1 -11 1566 1381 253 311 107 0 chr20 39784789 39784892 -32368990 - L3 LINE CR1 -385 1192 1079 197 377 13 0 chr20 39784999 39785076 -32368806 - L2 LINE L2 -7 3265 3188 531 319 20 54 chr20 39785157 39785455 -32368427 - L3 LINE CR1 -677 900 613 2168 131 0 0 chr20 39785482 39785779 -32368103 - AluSx SINE Alu -12 300 4 297 304 87 54 chr20 39786150 39786541 -32367341 + L1ME LINE L1 4628 5031 -1115 557 278 176 13 chr20 39786817 39787197 -32366685 + L1ME LINE L1 5351 5816 -305 549 237 17 40 chr20 39787211 39787384 -32366498 + MER117 DNA MER1_type 1 169 -28 244 257 81 14 chr20 39788026 39788100 -32365782 - L2 LINE L2 -55 3258 3180 865 198 219 50 chr20 39788131 39788372 -32365510 - MIR SINE MIR 0 262 1 281 248 89 30 chr20 39789719 39789774 -32364108 + L2 LINE L2 3204 3254 -59 2012 152 10 13 chr20 39789774 39790083 -32363799 + AluSx SINE Alu 1 308 -4 281 248 89 30 chr20 39790083 39790128 -32363754 + L2 LINE L2 3254 3310 -3 1327 165 39 31 chr20 39790253 39790513 -32363369 - AluJo SINE Alu -8 304 43 280 271 94 12 chr20 39790529 39790614 -32363268 + MIR SINE MIR 171 262 0 248 297 0 0 chr20 39791130 39791194 -32362688 - L2 LINE L2 -4 3268 3205 1592 144 37 9 chr20 39791251 39791575 -32362307 - MLT1A1 LTR MaLR 0 365 1 198 0 0 0 chr20 39793880 39793902 -32359980 + (TAA)n Simple_repeat Simple_repeat 1 22 0 392 309 10 36 chr20 39796408 39796573 -32357309 - MIR SINE MIR -52 210 46 296 310 46 11 chr20 39796608 39796695 -32357187 - MIR SINE MIR -62 146 57 1045 113 0 0 chr20 39796966 39797099 -32356783 - FLAM_C SINE Alu 0 133 1 183 80 0 0 chr20 39797129 39797154 -32356728 + (TGGA)n Simple_repeat Simple_repeat 1 25 0 2190 118 3 0 chr20 39797490 39797777 -32356105 - AluSx SINE Alu -16 296 9 326 197 76 0 chr20 39798942 39799008 -32354874 - MIR3 SINE MIR -43 165 95 198 0 0 0 chr20 39799079 39799101 -32354781 + (TC)n Simple_repeat Simple_repeat 1 22 0 333 125 0 0 chr20 39799107 39799163 -32354719 + (TG)n Simple_repeat Simple_repeat 1 56 0 188 108 0 27 chr20 39799260 39799297 -32354585 + (TTTTC)n Simple_repeat Simple_repeat 5 40 0 2014 134 0 40 chr20 39799308 39799629 -32354253 - AluJo SINE Alu -4 308 1 267 255 221 35 chr20 39800575 39800720 -32353162 - MIR SINE MIR -70 192 21 287 248 59 20 chr20 39801468 39801569 -32352313 + MER5A DNA MER1_type 22 126 -63 26 0 0 0 chr20 39802299 39802325 -32351557 + AT_rich Low_complexity Low_complexity 1 26 0 725 274 47 0 chr20 39803252 39803442 -32350440 + MIR SINE MIR 63 261 -1 185 233 0 23 chr20 39803454 39803497 -32350385 + MIR SINE MIR 216 257 -5 595 300 141 26 chr20 39804235 39804839 -32349043 - L2 LINE L2 -1 3312 2626 285 328 84 0 chr20 39806415 39806534 -32347348 + MIR3 SINE MIR 34 162 -46 279 281 67 89 chr20 39806578 39806713 -32347169 - L2 LINE L2 0 3272 3141 255 191 0 0 chr20 39806844 39806886 -32346996 - MIR SINE MIR -113 149 108 186 337 36 12 chr20 39807120 39807203 -32346679 + MIR SINE MIR 42 126 -82 411 324 28 45 chr20 39807547 39807726 -32346156 + MIR SINE MIR 22 197 -65 308 304 89 53 chr20 39809053 39809559 -32344323 - L2 LINE L2 -18 3254 2717 381 271 145 29 chr20 39811154 39811242 -32342640 - L1ME LINE L1 -317 5804 5728 1990 127 54 30 chr20 39811242 39811443 -32342439 + MER44D DNA MER2_type 1 196 -2295 2362 99 0 13 chr20 39811443 39811757 -32342125 - AluSx SINE Alu -2 310 1 1990 127 54 30 chr20 39811757 39811886 -32341996 + MER44D DNA MER2_type 196 609 0 381 271 145 29 chr20 39811886 39812004 -32341878 - L1ME LINE L1 -393 5728 5574 333 277 122 43 chr20 39812052 39812240 -32341642 - L1ME LINE L1 -2338 5470 5295 479 229 33 82 chr20 39813686 39813864 -32340018 + MIR SINE MIR 48 216 -46 266 329 96 36 chr20 39813864 39814031 -32339851 + MER5B DNA MER1_type 1 177 -1 412 325 24 8 chr20 39814486 39814609 -32339273 - MIR3 SINE MIR -81 127 3 876 168 47 68 chr20 39814887 39815015 -32338867 + MER5A DNA MER1_type 1 126 -63 2350 65 7 0 chr20 39815015 39815326 -32338556 - AluY SINE Alu 0 313 1 876 168 47 68 chr20 39815326 39815386 -32338496 + MER5A DNA MER1_type 126 186 -3 10999 139 32 23 chr20 39865662 39866193 -32287689 - L1PBa LINE L1 -2249 4613 4089 2217 113 6 28 chr20 39866193 39866513 -32287369 - AluSq SINE Alu 0 313 1 2641 49 0 7 chr20 39866522 39866828 -32287054 - AluY SINE Alu -7 304 1 10999 139 32 23 chr20 39866828 39870101 -32283781 - L1PBa LINE L1 -2780 4082 621 1222 143 5 0 chr20 39870089 39870285 -32283597 - L1PBa LINE L1 -6663 200 4 * 1409 162 77 74 chr20 39870299 39870651 -32283231 - L1ME1 LINE L1 -300 5866 5514 391 280 0 8 chr20 39870744 39870862 -32283020 + L2 LINE L2 3195 3311 -2 904 249 73 38 chr20 39871008 39871321 -32282561 - MLT1J LTR MaLR -161 350 27 1028 225 78 9 chr20 39871875 39872106 -32281776 - LTR16C LTR ERVL 0 491 245 288 105 0 168 chr20 39872113 39872208 -32281674 - LTR19A LTR ERV1 -2 484 406 * 775 48 0 10 chr20 39872160 39872263 -32281619 + LTR19A LTR ERV1 385 486 0 573 276 69 30 chr20 39872266 39872498 -32281384 - LTR16C LTR ERVL -250 241 1 580 285 149 62 chr20 39872547 39872937 -32280945 + L2 LINE L2 2849 3272 0 260 248 124 35 chr20 39873583 39873696 -32280186 + L2 LINE L2 2927 3049 -223 180 315 164 0 chr20 39873844 39873917 -32279965 - MIR SINE MIR -98 164 80 188 167 28 0 chr20 39874074 39874110 -32279772 + L2 LINE L2 3268 3304 -9 1679 86 112 37 chr20 39874564 39874857 -32279025 - AluSg1 SINE Alu 0 309 1 2111 113 3 0 chr20 39875222 39875522 -32278360 - AluSq SINE Alu -12 301 1 771 226 153 22 chr20 39875526 39875800 -32278082 - L1MC4a LINE L1 -1921 5887 5578 1026 102 0 182 chr20 39875908 39876144 -32277738 - 7SK RNA RNA 0 193 1 2264 98 3 0 chr20 39876259 39876565 -32277317 - AluSp SINE Alu -6 307 1 657 197 0 0 chr20 39876617 39876734 -32277148 - FRAM SINE Alu -59 117 1 208 260 80 0 chr20 39876883 39876933 -32276949 + L2 LINE L2 3251 3304 -9 328 296 201 15 chr20 39876951 39877150 -32276732 - L1MC/D LINE L1 -2096 5712 5477 309 300 31 15 chr20 39877150 39877280 -32276602 - MIR3 SINE MIR -13 195 64 237 167 0 0 chr20 39877977 39878031 -32275851 + G-rich Low_complexity Low_complexity 1 54 0 227 270 79 34 chr20 39878734 39878823 -32275059 + MLT1K LTR MaLR 26 118 -470 2256 71 0 7 chr20 39878987 39879284 -32274598 + AluY SINE Alu 1 295 -16 1434 193 0 39 chr20 39879308 39879658 -32274224 + AluJo SINE Alu 1 312 0 381 200 33 33 chr20 39879660 39879750 -32274132 + MER58C DNA MER1_type 126 215 0 529 174 43 0 chr20 39879811 39879903 -32273979 + FLAM_C SINE Alu 27 122 -21 283 225 56 22 chr20 39880060 39880149 -32273733 + MLT1K LTR MaLR 489 580 -8 264 284 174 9 chr20 39880182 39880291 -32273591 + L2 LINE L2 2934 3060 -212 353 361 19 24 chr20 39880433 39880641 -32273241 - MIR SINE MIR -36 226 20 243 309 32 21 chr20 39881295 39881389 -32272493 + MIR3 SINE MIR 81 175 -33 1045 112 6 6 chr20 39882170 39882339 -32271543 - AluSg/x SINE Alu -3 309 141 1564 239 59 59 chr20 39882339 39882806 -32271076 + L1MC5 LINE L1 7060 7529 -432 2281 91 3 0 chr20 39882806 39883104 -32270778 - AluSp SINE Alu -14 299 1 1564 239 59 59 chr20 39883104 39883276 -32270606 + L1MC5 LINE L1 7528 7699 -262 304 234 50 92 chr20 39883283 39883424 -32270458 + L1MC5 LINE L1 7749 7883 -78 368 276 79 55 chr20 39885408 39885535 -32268347 + L2 LINE L2 3175 3304 -9 361 236 164 14 chr20 39885759 39885899 -32267983 + MIR SINE MIR 74 234 -28 2217 88 7 0 chr20 39886193 39886489 -32267393 - AluSx SINE Alu -14 298 1 264 319 50 8 chr20 39888679 39888798 -32265084 - L2 LINE L2 -9 3263 3140 256 222 63 0 chr20 39888897 39888960 -32264922 + MIR3 SINE MIR 123 189 -19 243 241 19 0 chr20 39891073 39891127 -32262755 - MIR SINE MIR -67 141 87 217 232 145 0 chr20 39892446 39892515 -32261367 + L2 LINE L2 3193 3271 -42 424 305 55 0 chr20 39892520 39892648 -32261234 - MIR SINE MIR -55 207 73 1940 147 0 3 chr20 39892941 39893240 -32260642 - AluJb SINE Alu -14 298 1 489 262 183 12 chr20 39894520 39894772 -32259110 - L2 LINE L2 -620 2694 2400 1799 121 0 18 chr20 39894827 39895100 -32258782 - AluSg SINE Alu -42 268 1 2016 112 0 14 chr20 39898596 39898891 -32254991 - AluSg SINE Alu -19 291 1 449 259 54 18 chr20 39899495 39899607 -32254275 + MIR SINE MIR 68 183 -79 866 299 96 54 chr20 39900085 39900938 -32252944 - L2 LINE L2 -4 3268 2351 360 264 89 136 chr20 39901487 39901870 -32252012 + L2 LINE L2 2949 3313 0 700 253 17 51 chr20 39901907 39902085 -32251797 - MIR SINE MIR -85 177 6 2171 109 7 0 chr20 39902378 39902680 -32251202 - AluSp SINE Alu -9 304 1 456 120 14 0 chr20 39903488 39903566 -32250316 + MSTD LTR MaLR 326 396 0 325 265 74 43 chr20 39903568 39903636 -32250246 + L1ME4a LINE L1 5748 5812 -309 1590 183 10 7 chr20 39903636 39903926 -32249956 - AluJo SINE Alu -21 291 1 325 265 74 43 chr20 39903926 39904019 -32249863 + L1ME4a LINE L1 5812 5914 -207 1910 103 4 0 chr20 39904171 39904432 -32249450 + AluSq SINE Alu 38 299 -14 211 250 43 22 chr20 39904717 39904809 -32249073 + MIR SINE MIR 106 199 -63 193 135 81 0 chr20 39904978 39905015 -32248867 + L3b LINE CR1 1283 1322 -261 219 167 0 0 chr20 39905821 39905863 -32248019 + A-rich Low_complexity Low_complexity 1 42 0 907 230 78 84 chr20 39906073 39906569 -32247313 + L1ME LINE L1 5279 5762 -359 503 306 45 63 chr20 39907208 39907541 -32246341 + L2 LINE L2 2882 3208 -105 301 289 86 0 chr20 39907650 39907778 -32246104 + L1MC/D LINE L1 5559 5697 -2111 1821 235 55 0 chr20 39908676 39909114 -32244768 + L1MC/D LINE L1 5361 5822 -1986 244 243 14 40 chr20 39909911 39909985 -32243897 + L2 LINE L2 3155 3226 -46 742 294 141 34 chr20 39909988 39910164 -32243718 + L2 LINE L2 2749 2905 -408 1700 156 26 10 chr20 39910164 39910466 -32243416 - AluJo SINE Alu -5 307 1 742 294 141 34 chr20 39910466 39910796 -32243086 + L2 LINE L2 2905 3313 0 2321 68 0 19 chr20 39911131 39911439 -32242443 - AluY SINE Alu -9 302 1 370 153 17 0 chr20 39911542 39911556 -32242326 + MER3 DNA MER1_type 33 47 -162 648 204 235 0 chr20 39911556 39911718 -32242164 - MER3 DNA MER1_type 0 209 10 322 327 19 9 chr20 39911843 39911963 -32241919 + MIR SINE MIR 57 252 -10 188 138 0 0 chr20 39911963 39911992 -32241890 + L2 LINE L2 3226 3254 -18 322 327 19 9 chr20 39911992 39912004 -32241878 + MIR SINE MIR 252 262 0 375 208 42 0 chr20 39914583 39914655 -32239227 - L2 LINE L2 0 3272 3198 931 208 30 39 chr20 39914904 39915135 -32238747 - L1ME3 LINE L1 -1 6161 5933 180 111 0 0 chr20 39915351 39915378 -32238504 + (CAGG)n Simple_repeat Simple_repeat 4 30 0 224 355 59 32 chr20 39915433 39915619 -32238263 - L2 LINE L2 -1904 1410 1220 237 260 0 0 chr20 39915622 39915672 -32238210 - MIR3 SINE MIR -6 202 153 26 0 0 0 chr20 39916298 39916324 -32237558 + AT_rich Low_complexity Low_complexity 1 26 0 343 338 41 5 chr20 39916617 39916837 -32237045 + L1MDa LINE L1 1671 1944 -957 269 345 31 93 chr20 39917377 39917635 -32236247 + L2 LINE L2 2620 2861 -453 321 324 196 0 chr20 39917712 39917885 -32235997 + L2 LINE L2 3094 3300 -13 288 0 0 0 chr20 39918068 39918100 -32235782 + (TG)n Simple_repeat Simple_repeat 1 32 0 427 256 139 64 chr20 39918783 39919530 -32234352 + L1ME LINE L1 676 1365 -4896 1703 174 7 3 chr20 39919530 39919828 -32234054 + AluJb SINE Alu 1 299 -13 427 256 139 64 chr20 39919828 39920348 -32233534 + L1ME LINE L1 1365 2091 -4170 1016 164 22 78 chr20 39920389 39920621 -32233261 - MER20 DNA MER1_type 0 219 1 1923 246 79 19 chr20 39920622 39920987 -32232895 + L1ME LINE L1 4512 4853 -1251 300 53 0 0 chr20 39920987 39921025 -32232857 + (TA)n Simple_repeat Simple_repeat 2 39 0 1923 246 79 19 chr20 39921025 39921816 -32232066 + L1ME LINE L1 4853 5742 -362 232 273 0 0 chr20 39921816 39921871 -32232011 + MARNA DNA Mariner 350 404 -182 618 239 230 25 chr20 39922857 39923175 -32230707 + L2 LINE L2 2928 3310 -3 264 287 228 15 chr20 39923513 39923649 -32230233 + MIR3 SINE MIR 23 187 -21 366 249 67 55 chr20 39923790 39923945 -32229937 - MIR SINE MIR -95 167 8 301 265 39 77 chr20 39923945 39924126 -32229756 + MER5B DNA MER1_type 1 174 -4 24 32 0 0 chr20 39924909 39924940 -32228942 + AT_rich Low_complexity Low_complexity 1 31 0 6881 173 129 45 chr20 39924957 39925957 -32227925 + L1MDa LINE L1 2 916 -5624 2204 120 0 0 chr20 39925957 39926258 -32227624 + AluSq SINE Alu 8 308 -5 6881 173 129 45 chr20 39926258 39926830 -32227052 + L1MDa LINE L1 916 1438 -5102 1881 156 7 0 chr20 39926830 39927119 -32226763 - AluSx SINE Alu -19 293 3 6881 173 129 45 chr20 39927119 39927801 -32226081 + L1MDa LINE L1 1438 2501 -4039 1401 208 72 39 chr20 39927802 39928070 -32225812 + MER2 DNA MER2_type 2 285 -60 2357 151 84 12 chr20 39928070 39928307 -32225575 - Tigger2a DNA MER2_type -2274 434 155 2251 108 7 0 chr20 39928307 39928614 -32225268 + AluSx SINE Alu 1 309 -3 2357 151 84 12 chr20 39928614 39928781 -32225101 - Tigger2a DNA MER2_type -2553 155 1 1401 208 72 39 chr20 39928781 39928844 -32225038 + MER2 DNA MER2_type 285 344 -1 4562 209 67 92 chr20 39928844 39929363 -32224519 + L1MDa LINE L1 2531 3061 -3479 1891 176 7 0 chr20 39929363 39929670 -32224212 - AluJb SINE Alu -3 309 1 4562 209 67 92 chr20 39929670 39930355 -32223527 + L1MDa LINE L1 3061 3762 -2778 2100 122 212 3 chr20 39930355 39930709 -32223173 + MSTC LTR MaLR 1 428 0 4562 209 67 92 chr20 39930709 39931192 -32222690 + L1MDa LINE L1 3762 4173 -2367 306 0 0 0 chr20 39931192 39931226 -32222656 + (CA)n Simple_repeat Simple_repeat 2 35 0 4562 209 67 92 chr20 39931226 39931348 -32222534 + L1MDa LINE L1 4173 4297 -2243 2213 271 127 8 chr20 39931348 39932376 -32221506 + L2 LINE L2 2094 3313 0 491 266 63 68 chr20 39932380 39932632 -32221250 + MIR SINE MIR 12 262 0 655 243 96 19 chr20 39932735 39932961 -32220921 + MIR SINE MIR 20 262 0 1334 152 160 0 chr20 39933252 39933508 -32220374 - AluJo SINE Alu -15 297 1 276 273 212 10 chr20 39934900 39934999 -32218883 - MIR SINE MIR -62 146 28 549 268 26 26 chr20 39935110 39935263 -32218619 + MIR SINE MIR 19 171 -91 321 330 0 0 chr20 39935244 39935347 -32218535 - MIR SINE MIR -4 258 156 * 189 0 0 0 chr20 39935386 39935407 -32218475 + (TCTCC)n Simple_repeat Simple_repeat 2 22 0 202 222 0 74 chr20 39935448 39935502 -32218380 - L2 LINE L2 -13 3259 3210 331 215 159 28 chr20 39935505 39935612 -32218270 + MIR SINE MIR 23 143 -119 224 280 152 53 chr20 39935612 39935744 -32218138 - MIR SINE MIR -4 258 114 187 327 0 19 chr20 39935857 39935909 -32217973 - L2 LINE L2 -86 3186 3136 2448 76 0 3 chr20 39936423 39936727 -32217155 - AluY SINE Alu -8 303 1 445 246 127 42 chr20 39936852 39936994 -32216888 - MIR SINE MIR -89 173 20 834 158 44 127 chr20 39937364 39937592 -32216290 + MER3 DNA MER1_type 1 209 0 1277 75 0 17 chr20 39938971 39939145 -32214737 - AluSg/x SINE Alu -13 299 129 2428 87 0 6 chr20 39939149 39939461 -32214421 - AluY SINE Alu -1 310 1 2308 98 3 0 chr20 39940071 39940366 -32213516 - AluSp SINE Alu -16 297 2 2327 111 0 0 chr20 39940399 39940697 -32213185 - AluSx SINE Alu -14 298 1 180 111 0 0 chr20 39940896 39940923 -32212959 + (T)n Simple_repeat Simple_repeat 1 27 0 412 275 44 31 chr20 39942353 39942513 -32211369 + MIR SINE MIR 64 225 -37 234 280 53 0 chr20 39942541 39942616 -32211266 + L2 LINE L2 3190 3268 -4 269 133 44 0 chr20 39942676 39942721 -32211161 + L2 LINE L2 3267 3313 0 1374 146 0 15 chr20 39942816 39943021 -32210861 + AluJo SINE Alu 85 286 -26 1354 286 167 47 chr20 39943677 39944662 -32209220 - L2 LINE L2 -5 3308 2207 2279 187 94 40 chr20 39944667 39945036 -32208846 - MER68 LTR ERV1 -2 560 152 2465 66 0 3 chr20 39945036 39945337 -32208545 - AluY SINE Alu -11 300 1 2279 187 94 40 chr20 39945337 39945497 -32208385 - MER68 LTR ERV1 -410 152 2 1175 255 109 31 chr20 39947094 39947775 -32206107 - L2 LINE L2 -63 3250 2516 240 367 20 20 chr20 39949449 39949547 -32204335 + MIR SINE MIR 30 127 -81 2182 99 7 0 chr20 39949618 39949911 -32203971 - AluSx SINE Alu -17 295 1 2363 107 0 0 chr20 39950023 39950331 -32203551 - AluSg1 SINE Alu -1 308 1 186 306 119 62 chr20 39950470 39950663 -32203219 + L2 LINE L2 2774 2977 -337 424 65 0 0 chr20 39951851 39951913 -32201969 + L1MA7 LINE L1 6230 6291 0 524 293 107 18 chr20 39952064 39952289 -32201593 - MIR SINE MIR -7 255 11 447 247 23 69 chr20 39952392 39952423 -32201459 + MIR SINE MIR 40 71 -191 2245 96 7 0 chr20 39952423 39952714 -32201168 - AluSp SINE Alu -20 293 1 447 247 23 69 chr20 39952714 39952856 -32201026 + MIR SINE MIR 71 205 -57 185 333 29 29 chr20 39953005 39953074 -32200808 + MIR SINE MIR 8 76 -186 729 86 0 0 chr20 39953314 39953407 -32200475 - HY3 scRNA scRNA -5 96 4 252 0 0 0 chr20 39953416 39953444 -32200438 + (T)n Simple_repeat Simple_repeat 1 28 0 31 0 0 0 chr20 39953883 39953914 -32199968 + AT_rich Low_complexity Low_complexity 1 31 0 1086 148 59 25 chr20 39954452 39954655 -32199227 - MER2 DNA MER2_type -135 210 1 188 319 42 69 chr20 39954793 39955009 -32198873 - L2 LINE L2 -819 2495 2286 184 269 75 81 chr20 39955156 39955316 -32198566 + MIR3 SINE MIR 44 202 -6 201 291 36 0 chr20 39955567 39955622 -32198260 - L2 LINE L2 -6 3307 3251 4944 181 64 21 chr20 39955668 39956704 -32197178 - Tigger6a DNA MER2_type -3 1080 1 2039 126 3 16 chr20 39956768 39957077 -32196805 + AluSq SINE Alu 1 305 -8 252 300 122 0 chr20 39957312 39957402 -32196480 + MIR SINE MIR 88 188 -74 21 71 0 0 chr20 39957694 39957736 -32196146 + AT_rich Low_complexity Low_complexity 1 42 0 254 238 25 62 chr20 39958826 39958906 -32194976 - MIR SINE MIR -166 96 20 1901 166 0 23 chr20 39959369 39959677 -32194205 - AluJo SINE Alu -11 301 1 24 0 0 0 chr20 39959804 39959828 -32194054 + AT_rich Low_complexity Low_complexity 1 24 0 360 270 130 9 chr20 39960817 39960932 -32192950 - MIR SINE MIR -114 148 20 602 259 45 32 chr20 39961113 39961360 -32192522 - L2 LINE L2 -179 3134 2885 389 260 123 23 chr20 39961384 39961603 -32192279 + L2 LINE L2 891 1131 -2183 887 200 38 23 chr20 39961784 39962004 -32191878 - L1MB2 LINE L1 -2 6169 5955 184 194 28 0 chr20 39962012 39962048 -32191834 + L2 LINE L2 1153 1189 -2125 1120 256 217 2 chr20 39962065 39962498 -32191384 + L2 LINE L2 1492 2017 -1297 1181 178 63 44 chr20 39962498 39962768 -32191114 + MLT1D LTR MaLR 1 275 -230 414 162 0 0 chr20 39962784 39962852 -32191030 + MLT1D LTR MaLR 429 496 -9 1376 271 208 20 chr20 39962852 39963495 -32190387 + L2 LINE L2 2021 2784 -530 847 213 12 0 chr20 39963502 39963662 -32190220 - FRAM SINE Alu -15 161 1 942 256 104 30 chr20 39963684 39964087 -32189795 + L2 LINE L2 2827 3259 -54 367 288 192 23 chr20 39964130 39964484 -32189398 - L2 LINE L2 -1439 1875 1462 254 246 35 97 chr20 39965347 39965449 -32188433 - MER112 DNA MER1_type -5 255 159 1738 76 0 5 chr20 39965449 39965672 -32188210 + AluY SINE Alu 83 304 -7 254 246 35 97 chr20 39965672 39965683 -32188199 - MER112 DNA MER1_type -101 159 149 248 208 21 0 chr20 39965745 39965793 -32188089 - MER112 DNA MER1_type -210 50 2 1422 187 87 19 chr20 39966054 39966375 -32187507 + MER2 DNA MER2_type 2 344 0 2474 77 0 0 chr20 39967318 39967618 -32186264 - AluY SINE Alu -11 300 1 1551 144 4 32 chr20 39969065 39969315 -32184567 - AluSx SINE Alu -21 291 49 24 0 0 0 chr20 39969632 39969656 -32184226 + AT_rich Low_complexity Low_complexity 1 24 0 201 200 31 77 chr20 39970565 39970630 -32183252 + L2 LINE L2 3199 3260 -12 2116 109 31 3 chr20 39971402 39971695 -32182187 - AluSx SINE Alu -11 301 1 465 119 165 55 chr20 39971862 39971971 -32181911 - L1MB5 LINE L1 -1 6173 6053 4005 184 47 9 chr20 39971973 39973346 -32180536 - L1MB5 LINE L1 -283 5895 4479 213 257 100 0 chr20 39973610 39973680 -32180202 - MIR3 SINE MIR -24 184 108 197 105 0 26 chr20 39974807 39974845 -32179037 + (TTTTC)n Simple_repeat Simple_repeat 4 40 0 189 0 0 0 chr20 39975405 39975426 -32178456 + (TTTTTG)n Simple_repeat Simple_repeat 5 25 0 345 174 252 0 chr20 39975426 39975541 -32178341 - L1ME4a LINE L1 0 6121 5978 297 309 42 18 chr20 39977540 39977570 -32176312 + L2 LINE L2 2137 2165 -1149 2346 103 10 3 chr20 39977570 39977881 -32176001 - AluSq SINE Alu 0 313 1 297 309 42 18 chr20 39977881 39978018 -32175864 + L2 LINE L2 2165 2308 -1006 444 283 98 63 chr20 39978334 39978557 -32175325 + L2 LINE L2 2564 2809 -505 1924 135 35 3 chr20 39978557 39978846 -32175036 + AluJb SINE Alu 1 298 -14 444 283 98 63 chr20 39978846 39979021 -32174861 + L2 LINE L2 2809 2976 -338 8993 188 23 38 chr20 39979917 39981183 -32172699 - L1PA15 LINE L1 0 6165 4881 2067 128 3 3 chr20 39981183 39981488 -32172394 - AluSx SINE Alu -7 305 1 8993 188 23 38 chr20 39981488 39983017 -32170865 - L1PA15 LINE L1 -1284 4881 3359 2371 86 0 3 chr20 39983046 39983350 -32170532 - AluY SINE Alu -8 303 1 1745 134 98 0 chr20 39986503 39986778 -32167104 - AluJb SINE Alu -10 302 1 713 194 30 0 chr20 39987162 39987296 -32166586 - FLAM_C SINE Alu -3 140 3 2195 112 3 10 chr20 39987610 39987923 -32165959 - AluSq SINE Alu -2 311 1 191 225 0 0 chr20 39988050 39988090 -32165792 + MIR SINE MIR 37 76 -132 239 284 55 16 chr20 39988533 39988660 -32165222 - L2 LINE L2 -2 3270 3139 275 250 185 0 chr20 39989023 39989131 -32164751 - MIR3 SINE MIR -51 157 30 231 248 58 66 chr20 39993242 39993363 -32160519 - MIR SINE MIR -77 185 66 363 196 20 142 chr20 39994048 39994118 -32159764 + MIR3 SINE MIR 70 114 -94 1653 156 46 29 chr20 39994118 39994425 -32159457 - AluJo SINE Alu 0 312 1 363 196 20 142 chr20 39994425 39994502 -32159380 + MIR3 SINE MIR 114 199 -9 306 286 10 20 chr20 39995110 39995208 -32158674 + MIR3 SINE MIR 78 174 -34 3674 166 13 22 chr20 39996713 39996759 -32157123 - L1MB5 LINE L1 0 6174 6129 2438 79 0 16 chr20 39996759 39997075 -32156807 + AluSq SINE Alu 1 311 -2 207 0 0 0 chr20 39997075 39997098 -32156784 + (TA)n Simple_repeat Simple_repeat 1 23 0 3674 166 13 22 chr20 39997098 39997729 -32156153 - L1MB5 LINE L1 -43 6131 5502 1999 174 54 13 chr20 39997729 39998119 -32155763 - MLT2D LTR ERVL 0 414 9 1729 216 81 17 chr20 39998185 39998607 -32155275 - MLT1C LTR MaLR 0 467 19 1813 143 66 51 chr20 39998639 39999123 -32154759 - L1MB5 LINE L1 -709 5471 4975 1722 141 0 0 chr20 39999123 39999364 -32154518 - 7SLRNA srpRNA srpRNA -79 241 1 5475 227 74 71 chr20 39999508 40001694 -32152188 + L1MEc LINE L1 73 2251 -3964 2324 98 0 7 chr20 40001694 40001999 -32151883 - AluSc SINE Alu -6 303 1 5475 227 74 71 chr20 40001999 40002361 -32151521 + L1MEc LINE L1 2251 2610 -3605 1447 197 43 50 chr20 40002361 40002737 -32151145 + MLT1A2 LTR MaLR 1 373 -1 5475 227 74 71 chr20 40002737 40003024 -32150858 + L1MEc LINE L1 2610 2880 -3335 2212 111 7 0 chr20 40003024 40003313 -32150569 + AluSx SINE Alu 1 291 -21 5475 227 74 71 chr20 40003313 40003477 -32150405 + L1MEc LINE L1 2880 3042 -3173 4955 189 41 71 chr20 40003480 40003601 -32150281 + L1M4 LINE L1 3960 4083 -2063 715 162 7 29 chr20 40003601 40003737 -32150145 + FLAM_C SINE Alu 1 133 0 4955 189 41 71 chr20 40003737 40003756 -32150126 + L1M4 LINE L1 4083 4101 -2045 2448 69 0 34 chr20 40003756 40004076 -32149806 + AluY SINE Alu 3 311 0 4955 189 41 71 chr20 40004076 40004591 -32149291 + L1M4 LINE L1 4101 4630 -1516 2379 106 0 0 chr20 40004591 40004892 -32148990 + AluSx SINE Alu 1 301 -11 4955 189 41 71 chr20 40004892 40005553 -32148329 + L1M4 LINE L1 4630 5238 -908 288 275 87 27 chr20 40005648 40005797 -32148085 - MIR SINE MIR -72 190 33 188 281 31 0 chr20 40005856 40005920 -32147962 - MIR SINE MIR -62 146 81 183 179 0 0 chr20 40006185 40006224 -32147658 + MIR SINE MIR 114 152 -56 186 43 0 0 chr20 40006377 40006400 -32147482 + (TC)n Simple_repeat Simple_repeat 2 24 0 2243 105 0 0 chr20 40006432 40006717 -32147165 + AluSq SINE Alu 1 285 -28 23 0 0 0 chr20 40006723 40006746 -32147136 + AT_rich Low_complexity Low_complexity 1 23 0 611 158 0 0 chr20 40006807 40006902 -32146980 - AluJo SINE Alu -8 304 210 1083 148 0 6 chr20 40006902 40007064 -32146818 - AluJo SINE Alu -151 161 1 779 201 0 21 chr20 40007167 40007311 -32146571 + MER58A DNA MER1_type 45 185 -39 328 248 40 20 chr20 40007328 40007429 -32146453 - MER70B LTR ERVL -17 561 459 7703 26 9 0 chr20 40007542 40008568 -32145314 + L1PA4 LINE L1 5120 6153 -2 2317 78 0 36 chr20 40008761 40009070 -32144812 + AluSx SINE Alu 1 298 -14 259 160 0 20 chr20 40009228 40009278 -32144604 + MER58A DNA MER1_type 174 222 -2 181 313 0 0 chr20 40009627 40009675 -32144207 + MIR SINE MIR 58 105 -103 405 283 50 19 chr20 40009800 40009959 -32143923 + MIR SINE MIR 31 194 -68 225 200 211 42 chr20 40011128 40011223 -32142659 + L3 LINE CR1 1400 1510 -67 595 214 130 67 chr20 40011237 40011475 -32142407 - MER102a DNA MER1_type -1 329 77 347 236 114 7 chr20 40011678 40011818 -32142064 + MIR3 SINE MIR 30 184 -24 1831 171 0 34 chr20 40011918 40012240 -32141642 - AluJo SINE Alu -1 311 1 360 250 50 29 chr20 40012461 40012601 -32141281 + MIR3 SINE MIR 60 202 -6 677 106 23 15 chr20 40012680 40012812 -32141070 + CT-rich Low_complexity Low_complexity 2 134 0 375 153 85 0 chr20 40012813 40012872 -32141010 - FRAM SINE Alu -29 137 74 593 233 238 0 chr20 40012899 40013105 -32140777 + MLT1F1 LTR MaLR 313 567 0 207 304 25 13 chr20 40013606 40013685 -32140197 - MIR SINE MIR -70 192 113 250 269 29 29 chr20 40014001 40014105 -32139777 + MIR SINE MIR 142 245 -17 201 39 0 0 chr20 40014105 40014131 -32139751 + (TGG)n Simple_repeat Simple_repeat 3 28 0 361 310 155 14 chr20 40014752 40015036 -32138846 - L2 LINE L2 0 3313 2990 1063 256 118 42 chr20 40015036 40015461 -32138421 + MLT1G1 LTR MaLR 1 457 -138 2234 114 0 0 chr20 40015524 40015821 -32138061 - AluSx SINE Alu -14 298 2 319 319 199 8 chr20 40015891 40016132 -32137750 - L2 LINE L2 -371 2943 2657 767 164 0 29 chr20 40016178 40016318 -32137564 - FRAM SINE Alu -9 167 32 786 286 81 3 chr20 40016320 40016677 -32137205 - L1MEc LINE L1 -2502 3713 3329 237 306 0 10 chr20 40016691 40016789 -32137093 - L1MEc LINE L1 -4098 2298 2202 353 196 0 22 chr20 40016791 40016883 -32136999 + CT-rich Low_complexity Low_complexity 1 90 0 979 313 46 11 chr20 40017293 40017941 -32135941 - L1MEc LINE L1 -4723 1673 1003 642 119 10 0 chr20 40017950 40018051 -32135831 - L1MB3 LINE L1 -7 6176 6075 200 401 80 7 chr20 40018427 40018564 -32135318 - L2 LINE L2 -8 3264 3118 4280 167 47 58 chr20 40018816 40019702 -32134180 - L1MB7 LINE L1 -1 6183 5302 1762 145 14 25 chr20 40019702 40019985 -32133897 - AluJo SINE Alu -30 282 3 4280 167 47 58 chr20 40019985 40020192 -32133690 - L1MB7 LINE L1 -882 5302 5094 383 211 96 0 chr20 40020193 40020297 -32133585 + L1ME3A LINE L1 6043 6156 -14 203 320 0 41 chr20 40020310 40020407 -32133475 + MIR SINE MIR 137 229 -33 2163 113 7 3 chr20 40020454 40020763 -32133119 - AluSg SINE Alu 0 310 1 301 247 21 21 chr20 40020773 40020866 -32133016 + MIR SINE MIR 52 144 -118 2055 249 29 50 chr20 40021476 40021587 -32132295 - L1ME3A LINE L1 -9 6161 6049 2164 125 23 0 chr20 40021587 40021892 -32131990 + AluSx SINE Alu 1 312 0 2055 249 29 50 chr20 40021892 40022057 -32131825 - L1ME3A LINE L1 -121 6049 5882 2219 92 7 3 chr20 40022057 40022353 -32131529 - AluSx SINE Alu -16 296 2 2055 249 29 50 chr20 40022353 40022759 -32131123 - L1ME3A LINE L1 -288 5882 5492 262 286 13 13 chr20 40022828 40022905 -32130977 + (TATG)n Simple_repeat Simple_repeat 2 78 0 318 293 0 7 chr20 40023035 40023171 -32130711 - L1MC4 LINE L1 -1329 6713 6613 2203 131 0 0 chr20 40023259 40023571 -32130311 + AluSx SINE Alu 1 312 0 321 238 59 20 chr20 40023797 40023898 -32129984 - MER69 DNA AcHobo -2421 105 1 211 316 51 13 chr20 40024065 40024144 -32129738 + L2 LINE L2 2989 3070 -243 277 304 37 43 chr20 40024181 40024342 -32129540 + MIR SINE MIR 2 161 -101 307 255 59 49 chr20 40024364 40024466 -32129416 + L1MCa LINE L1 1963 2065 -4361 * 346 303 65 47 chr20 40024406 40024800 -32129082 - L1MCa LINE L1 -4210 2216 1844 * 389 309 64 48 chr20 40024786 40025228 -32128654 - L1MCa LINE L1 -4212 2214 1933 1889 131 0 7 chr20 40025264 40025546 -32128336 - AluJb SINE Alu -30 282 3 221 333 0 43 chr20 40025559 40025652 -32128230 - MIR SINE MIR -56 206 118 395 269 50 19 chr20 40025823 40025983 -32127899 - L1ME3A LINE L1 0 6170 6006 677 195 0 0 chr20 40026608 40026726 -32127156 + MIR SINE MIR 35 152 -110 558 288 30 30 chr20 40026786 40026984 -32126898 - MIR SINE MIR -31 231 34 299 392 53 18 chr20 40027349 40027576 -32126306 - L2 LINE L2 -95 3177 2943 269 227 71 58 chr20 40027825 40027979 -32125903 + LTR33A LTR ERVL 368 523 0 1468 154 30 43 chr20 40028223 40028550 -32125332 + MER33 DNA MER1_type 1 322 -2 487 374 79 16 chr20 40028613 40029001 -32124881 - L2 LINE L2 -81 3191 2783 354 254 116 35 chr20 40029824 40029997 -32123885 - MIR3 SINE MIR -5 203 17 307 238 0 0 chr20 40031290 40031370 -32122512 + L1ME3A LINE L1 6091 6170 0 201 100 0 0 chr20 40032029 40032059 -32121823 + MIR SINE MIR 111 140 -122 474 235 190 11 chr20 40032166 40032345 -32121537 + MIR SINE MIR 20 230 -32 622 290 149 0 chr20 40032459 40032673 -32121209 - MIR SINE MIR 0 262 17 253 258 32 21 chr20 40033233 40033326 -32120556 - MIR SINE MIR -141 121 28 309 250 29 57 chr20 40033337 40033477 -32120405 + MIR3 SINE MIR 1 136 -72 460 297 91 23 chr20 40033592 40033811 -32120071 - MIR SINE MIR -1 261 28 220 276 31 31 chr20 40033936 40034034 -32119848 + MIR SINE MIR 40 137 -71 678 289 74 17 chr20 40034290 40034308 -32119574 + MER113 DNA MER1_type? 207 223 -298 2106 126 0 7 chr20 40034308 40034617 -32119265 + AluJb SINE Alu 5 311 -1 678 289 74 17 chr20 40034617 40034896 -32118986 + MER113 DNA MER1_type? 223 521 0 458 101 0 14 chr20 40035999 40036068 -32117814 + L1PB4 LINE L1 6076 6143 -13 348 24 0 0 chr20 40036068 40036109 -32117773 + (CA)n Simple_repeat Simple_repeat 2 42 0 215 306 48 61 chr20 40036112 40036259 -32117623 - MIR3 SINE MIR -22 186 42 306 360 16 32 chr20 40036536 40036725 -32117157 - MIR SINE MIR -60 202 17 180 308 39 0 chr20 40037445 40037523 -32116359 + MIR SINE MIR 43 123 -85 650 266 42 42 chr20 40037792 40037866 -32116016 - MER3 DNA MER1_type 0 209 136 1709 108 128 0 chr20 40037866 40038153 -32115729 + AluSx SINE Alu 1 319 0 650 266 42 42 chr20 40038153 40038269 -32115613 - MER3 DNA MER1_type -72 137 18 695 278 6 6 chr20 40038500 40038680 -32115202 + MIR SINE MIR 72 251 -11 289 214 0 14 chr20 40039218 40039288 -32114594 + L2 LINE L2 2986 3054 -218 233 260 192 0 chr20 40039331 40039404 -32114478 + L2 LINE L2 3158 3244 -28 455 254 150 0 chr20 40040475 40040648 -32113234 + MIR SINE MIR 16 214 -48 1242 229 91 26 chr20 40041108 40041528 -32112354 + Charlie4a DNA MER1_type 22 468 -40 226 299 32 70 chr20 40041584 40041771 -32112111 + L1ME4a LINE L1 5926 6105 -16 313 252 58 65 chr20 40042575 40042714 -32111168 + L2 LINE L2 2968 3105 -167 339 269 202 49 chr20 40042986 40043094 -32110788 + L2 LINE L2 2593 2683 -631 2146 86 24 10 chr20 40043094 40043385 -32110497 + AluSx SINE Alu 1 295 -17 339 269 202 49 chr20 40043385 40043603 -32110279 + L2 LINE L2 2683 2969 -345 195 235 0 0 chr20 40043788 40043839 -32110043 + GA-rich Low_complexity Low_complexity 3 53 0 260 256 170 10 chr20 40043888 40044007 -32109875 + MIR3 SINE MIR 12 147 -77 452 275 58 0 chr20 40044868 40045006 -32108876 + MIR SINE MIR 47 192 -70 657 255 78 15 chr20 40045225 40045429 -32108453 - MIR SINE MIR -35 227 11 999 161 0 6 chr20 40046075 40046236 -32107646 - AluJb SINE Alu -18 294 135 890 243 11 0 chr20 40046236 40046421 -32107461 - MIR SINE MIR -55 207 21 1455 157 19 34 chr20 40046422 40046690 -32107192 - AluJo SINE Alu -1 311 48 518 262 131 11 chr20 40046907 40047098 -32106784 - MIR SINE MIR -2 260 47 189 282 8 94 chr20 40047222 40047339 -32106543 - MIR3 SINE MIR -87 121 15 589 291 120 11 chr20 40047922 40048292 -32105590 + L2 LINE L2 2753 3216 -97 207 0 0 0 chr20 40048292 40048315 -32105567 + (TCCCC)n Simple_repeat Simple_repeat 4 26 0 589 291 120 11 chr20 40048315 40048425 -32105457 + L2 LINE L2 3216 3313 0 410 239 284 17 chr20 40049228 40049529 -32104353 + L2 LINE L2 2698 3061 -252 420 292 74 47 chr20 40049712 40049969 -32103913 + L2 LINE L2 2827 3090 -182 2522 49 0 7 chr20 40050059 40050365 -32103517 + AluY SINE Alu 1 304 -7 482 197 61 127 chr20 40050849 40051081 -32102801 + MLT1H LTR MaLR 255 549 0 453 214 0 0 chr20 40051088 40051172 -32102710 + MER5A DNA MER1_type 1 84 -105 499 314 0 0 chr20 40051924 40052077 -32101805 - MIR SINE MIR -12 250 98 268 217 185 33 chr20 40052088 40052180 -32101702 + MIR3 SINE MIR 11 116 -92 308 347 40 36 chr20 40052336 40052587 -32101295 - L2 LINE L2 -189 3083 2832 1179 211 46 11 chr20 40052647 40052908 -32100974 + ORSL DNA AcHobo 3 272 -3 2322 91 0 0 chr20 40053906 40054213 -32099669 + AluSx SINE Alu 1 307 -5 273 314 19 0 chr20 40054214 40054319 -32099563 + L1MC4a LINE L1 5818 5924 -1884 1775 143 4 7 chr20 40054491 40054764 -32099118 - AluJb SINE Alu -23 289 18 199 359 51 0 chr20 40055064 40055142 -32098740 - MIR3 SINE MIR -21 187 106 306 360 46 0 chr20 40055206 40055359 -32098523 + MIR SINE MIR 42 201 -61 2075 121 0 0 chr20 40055487 40055808 -32098074 + AluSq SINE Alu 1 313 0 1692 177 0 19 chr20 40056000 40056311 -32097571 - AluJo SINE Alu -7 305 1 415 291 34 8 chr20 40056786 40056966 -32096916 + MIR3 SINE MIR 3 184 -54 256 326 59 0 chr20 40057445 40057553 -32096329 - MIR SINE MIR -72 136 32 213 347 41 10 chr20 40058089 40058187 -32095695 + MIR3 SINE MIR 61 161 -47 * 780 283 38 13 chr20 40058163 40058400 -32095482 + MIR SINE MIR 20 262 0 266 350 0 0 chr20 40058418 40058515 -32095367 + MIR SINE MIR 162 258 -4 219 355 0 0 chr20 40058563 40058656 -32095226 - MIR3 SINE MIR -9 199 107 491 291 8 0 chr20 40058660 40058787 -32095095 - MER94 DNA DNA 0 134 7 224 196 36 0 chr20 40059403 40059459 -32094423 + MIR SINE MIR 77 134 -74 210 163 20 20 chr20 40059871 40059885 -32093997 + GA-rich Low_complexity Low_complexity 1 14 -35 2000 123 0 13 chr20 40059885 40060193 -32093689 + L1PA13 LINE L1 5859 6162 -1 210 163 20 20 chr20 40060193 40060227 -32093655 + GA-rich Low_complexity Low_complexity 13 49 0 410 228 62 62 chr20 40060334 40060485 -32093397 + MIR SINE MIR 10 170 -38 415 204 19 37 chr20 40061179 40061287 -32092595 - MIR SINE MIR -124 138 33 1308 153 139 36 chr20 40061494 40061768 -32092114 - AluSp SINE Alu -11 302 1 276 227 45 41 chr20 40061835 40061968 -32091914 + MIR SINE MIR 40 171 -62 225 0 0 0 chr20 40062037 40062062 -32091820 + (TGG)n Simple_repeat Simple_repeat 3 27 0 1256 148 65 120 chr20 40062450 40062775 -32091107 - AluJo SINE Alu -5 307 1 456 283 0 0 chr20 40062857 40062963 -32090919 + MIR SINE MIR 154 259 -3 1015 232 165 36 chr20 40063034 40063556 -32090326 + L1MC5 LINE L1 7328 7916 -45 249 190 127 38 chr20 40063953 40064032 -32089850 - MIR SINE MIR -82 126 41 329 292 130 47 chr20 40064064 40064256 -32089626 - MIR SINE MIR -50 212 5 29 0 0 0 chr20 40065972 40066001 -32087881 + GC_rich Low_complexity Low_complexity 1 29 0 399 119 0 0 chr20 40066335 40066402 -32087480 + (CA)n Simple_repeat Simple_repeat 2 68 0 335 218 10 0 chr20 40066875 40066976 -32086906 + (TCCA)n Simple_repeat Simple_repeat 2 103 0 485 249 158 0 chr20 40067598 40067775 -32086107 + MIR SINE MIR 46 250 -12 1785 147 10 7 chr20 40068009 40068302 -32085580 - AluJb SINE Alu -18 294 1 727 275 22 26 chr20 40068474 40068706 -32085176 + MIR SINE MIR 27 258 -4 248 228 244 31 chr20 40068891 40069018 -32084864 + MIR3 SINE MIR 1 154 -54 556 226 151 0 chr20 40069183 40069342 -32084540 + MIR SINE MIR 69 251 -11 358 243 180 0 chr20 40069631 40069742 -32084140 - MIR SINE MIR -72 190 60 236 311 106 0 chr20 40070675 40070836 -32083046 + L2 LINE L2 2800 2977 -337 232 253 120 0 chr20 40070963 40071038 -32082844 + L2 LINE L2 3230 3313 0 194 280 15 0 chr20 40071335 40071413 -32082469 - MIR SINE MIR -84 124 45 564 250 7 28 chr20 40072403 40072547 -32081335 + MIR SINE MIR 46 186 -76 1781 180 10 38 chr20 40072591 40072986 -32080896 + L1MB7 LINE L1 5801 6184 0 380 325 72 13 chr20 40073071 40073327 -32080555 + L1MC4a LINE L1 5648 5822 -342 256 218 0 0 chr20 40073953 40074021 -32079861 - MIR SINE MIR -82 126 58 2441 197 26 2 chr20 40074945 40075447 -32078435 - L1ME1 LINE L1 -21 6145 5632 407 289 35 0 chr20 40075635 40075749 -32078133 - MIR SINE MIR -70 192 75 275 188 14 58 chr20 40075902 40075971 -32077911 + MIR3 SINE MIR 111 176 -32 459 286 117 15 chr20 40076562 40076768 -32077114 + MIR SINE MIR 36 262 0 2448 99 0 6 chr20 40076936 40077250 -32076632 - AluSx SINE Alu 0 312 1 2449 91 0 0 chr20 40077395 40077692 -32076190 + AluY SINE Alu 1 297 -14 1846 241 147 16 chr20 40078197 40078893 -32074989 + L2 LINE L2 2187 2973 -341 245 208 116 24 chr20 40079021 40079113 -32074769 + MIR SINE MIR 80 176 -32 293 279 48 10 chr20 40079149 40079253 -32074629 - MIR3 SINE MIR -37 171 64 1686 186 0 21 chr20 40079423 40079759 -32074123 + AluJb SINE Alu 1 330 0 201 350 57 43 chr20 40079803 40079943 -32073939 - L2 LINE L2 -172 3100 2959 2345 162 16 46 chr20 40079946 40080045 -32073837 + MSTA LTR MaLR 1 101 -327 2725 80 0 0 chr20 40080045 40080410 -32073472 + L1PA8 LINE L1 5795 6159 -13 2345 162 16 46 chr20 40080410 40080749 -32073133 + MSTA LTR MaLR 101 426 -2 180 395 0 0 chr20 40080940 40081016 -32072866 - L2 LINE L2 -553 2761 2686 187 229 86 67 chr20 40081024 40081040 -32072842 - MIR3 SINE MIR -2 206 192 2199 110 23 7 chr20 40081040 40081340 -32072542 - AluSx SINE Alu -7 305 1 187 229 86 67 chr20 40081340 40081428 -32072454 - MIR3 SINE MIR -16 192 100 258 224 40 14 chr20 40081655 40081742 -32072140 + MIR SINE MIR 74 163 -45 342 248 33 0 chr20 40082578 40082699 -32071183 - L1ME4a LINE L1 -20 6101 5977 200 339 17 0 chr20 40082778 40082837 -32071045 - L2 LINE L2 0 3313 3254 375 296 153 25 chr20 40082856 40083059 -32070823 - L1ME4a LINE L1 -224 5897 5705 233 154 26 0 chr20 40083153 40083192 -32070690 + MLT1J LTR MaLR 95 134 -377 2405 180 35 23 chr20 40083730 40084161 -32069721 - L1MB8 LINE L1 -2 6176 5736 1854 151 49 0 chr20 40084161 40084325 -32069557 - AluJo SINE Alu -14 298 113 186 43 0 0 chr20 40084325 40084348 -32069534 + (TTTTA)n Simple_repeat Simple_repeat 4 26 0 1854 151 49 0 chr20 40084348 40084467 -32069415 - AluJo SINE Alu -199 113 1 2405 180 35 23 chr20 40084467 40084557 -32069325 - L1MB8 LINE L1 -442 5736 5649 2291 96 0 34 chr20 40085185 40085508 -32068374 + AluSx SINE Alu 1 312 0 5058 183 70 37 chr20 40085603 40085957 -32067925 - L1MB8 LINE L1 -523 5661 5320 2218 127 0 0 chr20 40085957 40086256 -32067626 - AluSx SINE Alu -13 299 1 5058 183 70 37 chr20 40086256 40087509 -32066373 - L1MB8 LINE L1 -864 5320 3987 212 225 0 0 chr20 40087687 40087727 -32066155 + G-rich Low_complexity Low_complexity 1 40 0 1947 108 65 11 chr20 40087826 40088104 -32065778 + AluSx SINE Alu 1 293 -19 1078 176 85 126 chr20 40088202 40088576 -32065306 + MLT2D LTR ERVL 1 472 -48 339 25 0 0 chr20 40088576 40088616 -32065266 + (CA)n Simple_repeat Simple_repeat 2 41 0 1078 176 85 126 chr20 40088616 40088656 -32065226 + MLT2D LTR ERVL 472 512 -8 1618 258 55 35 chr20 40088664 40089108 -32064774 - L1ME3A LINE L1 -27 6143 5686 2007 136 3 7 chr20 40089108 40089410 -32064472 - AluJb SINE Alu -11 301 1 1618 258 55 35 chr20 40089410 40089473 -32064409 - L1ME3A LINE L1 -484 5686 5626 535 182 74 0 chr20 40089560 40089681 -32064201 - MER20B DNA MER1_type -127 656 527 545 273 85 18 chr20 40090630 40090795 -32063087 - MER20B DNA MER1_type -581 202 27 1697 161 0 65 chr20 40090898 40091221 -32062661 - AluJo SINE Alu -10 302 1 571 333 81 4 chr20 40091221 40091467 -32062415 - L3 LINE CR1 -762 815 551 253 313 0 0 chr20 40091540 40091620 -32062262 - MIR SINE MIR -70 138 59 192 288 12 37 chr20 40091959 40092045 -32061837 + MIR SINE MIR 104 183 -61 1651 264 68 12 chr20 40092054 40092572 -32061310 - L2 LINE L2 -492 2822 2276 694 144 0 0 chr20 40092870 40092981 -32060901 + FRAM SINE Alu 60 170 -6 206 286 154 0 chr20 40093090 40093181 -32060701 + MIR SINE MIR 41 145 -63 240 297 22 11 chr20 40093330 40093421 -32060461 - MIR SINE MIR -77 131 40 316 217 92 112 chr20 40093711 40093806 -32060076 - MIR SINE MIR -10 252 160 2279 117 0 0 chr20 40093806 40094105 -32059777 + AluSg SINE Alu 5 303 -7 316 217 92 112 chr20 40094105 40094161 -32059721 - MIR SINE MIR -102 160 104 370 291 9 9 chr20 40094785 40094895 -32058987 - MIR3 SINE MIR -54 154 45 200 209 0 0 chr20 40095096 40095139 -32058743 + A-rich Low_complexity Low_complexity 2 44 0 516 68 0 0 chr20 40095227 40095300 -32058582 + (TCCA)n Simple_repeat Simple_repeat 3 75 0 523 328 86 55 chr20 40095300 40095697 -32058185 - L2 LINE L2 -15 3257 2849 204 280 27 27 chr20 40096086 40096161 -32057721 - MIR SINE MIR -141 121 47 358 285 88 44 chr20 40096215 40096633 -32057249 - LTR16C LTR ERVL 0 474 57 425 323 37 67 chr20 40096795 40097064 -32056818 - L2 LINE L2 -2 3270 3010 209 274 0 0 chr20 40097178 40097229 -32056653 + MIR SINE MIR 91 141 -67 1497 227 56 84 chr20 40097683 40098181 -32055701 - L2 LINE L2 -1 3312 2829 263 154 15 0 chr20 40098227 40098292 -32055590 + GA-rich Low_complexity Low_complexity 1 66 0 187 286 0 0 chr20 40098657 40098699 -32055183 - MIR SINE MIR -58 150 109 751 200 178 0 chr20 40098824 40099004 -32054878 - MER58A DNA MER1_type -6 218 7 270 254 45 0 chr20 40099065 40099132 -32054750 + MIR SINE MIR 81 150 -58 1769 213 134 25 chr20 40099245 40099755 -32054127 - MLT1G1 LTR MaLR -29 526 1 2314 112 0 7 chr20 40100009 40100314 -32053568 + AluSg SINE Alu 1 303 -7 235 263 42 11 chr20 40100751 40100846 -32053036 - MIR SINE MIR -74 134 37 2172 109 0 3 chr20 40100911 40101232 -32052650 + AluSx SINE Alu 1 320 0 1838 114 76 8 chr20 40101690 40101954 -32051928 - AluSx SINE Alu -30 282 1 223 182 0 23 chr20 40101955 40101999 -32051883 - MIR SINE MIR -112 150 108 369 279 98 0 chr20 40102318 40102440 -32051442 + MER94 DNA DNA 1 134 0 501 316 75 22 chr20 40102603 40102831 -32051051 + MIR SINE MIR 23 262 0 193 319 35 26 chr20 40103711 40103827 -32050055 - L2 LINE L2 -266 3006 2890 454 266 175 0 chr20 40104364 40104507 -32049375 - MER117 DNA MER1_type 0 197 30 321 309 194 0 chr20 40104518 40104683 -32049199 - L2 LINE L2 0 3313 3117 1616 184 5 27 chr20 40104917 40105287 -32048595 - L1MB8 LINE L1 -1 6177 5816 6953 200 25 36 chr20 40105288 40106455 -32047427 - L1MB7 LINE L1 -10 6174 4997 2178 96 27 0 chr20 40106455 40106641 -32047241 - AluY SINE Alu 0 311 120 192 40 0 0 chr20 40106641 40106666 -32047216 + (TTTTG)n Simple_repeat Simple_repeat 5 29 0 2178 96 27 0 chr20 40106666 40106790 -32047092 - AluY SINE Alu -191 120 1 6953 200 25 36 chr20 40106790 40108217 -32045665 - L1MB7 LINE L1 -1187 4997 3608 2664 186 14 16 chr20 40108203 40108777 -32045105 - L1MB8 LINE L1 -356 5828 5256 * 516 290 67 10 chr20 40108890 40109083 -32044799 + LTR16A1 LTR ERVL 252 455 -2 439 309 144 21 chr20 40109087 40109572 -32044310 - L2 LINE L2 -397 2917 2373 218 314 48 9 chr20 40109609 40109714 -32044168 - MIR3 SINE MIR -49 159 51 441 217 11 114 chr20 40110067 40110242 -32043640 + MIR SINE MIR 70 226 -36 378 294 38 25 chr20 40110518 40110678 -32043204 - MIR3 SINE MIR -46 162 1 452 272 61 49 chr20 40110954 40111178 -32042704 + MIR SINE MIR 38 262 0 331 314 81 0 chr20 40112572 40112696 -32041186 + LTR16C LTR ERVL 211 344 -147 1537 157 67 26 chr20 40112701 40112968 -32040914 + AluJo SINE Alu 5 282 -30 699 120 0 19 chr20 40112998 40113106 -32040776 + FLAM_C SINE Alu 25 130 -13 250 257 80 18 chr20 40113153 40113266 -32040616 + LTR16C LTR ERVL 363 482 -9 2235 119 3 0 chr20 40114619 40114914 -32038968 - AluSx SINE Alu -16 296 1 342 176 13 11 chr20 40114952 40115041 -32038841 + MIR3 SINE MIR 102 192 -16 471 220 10 0 chr20 40115167 40115267 -32038615 - MIR SINE MIR -63 145 45 300 290 52 39 chr20 40115807 40115962 -32037920 - MIR3 SINE MIR -22 186 30 405 317 74 44 chr20 40116033 40116399 -32037483 - L2 LINE L2 -24 3248 2872 712 233 106 5 chr20 40116588 40116777 -32037105 + MIR SINE MIR 34 241 -21 371 243 53 15 chr20 40117343 40117491 -32036391 + MIR SINE MIR 102 251 -11 396 184 12 59 chr20 40118218 40118332 -32035550 + MIR SINE MIR 90 196 -62 241 255 9 75 chr20 40118597 40118703 -32035179 + MER5A DNA MER1_type 65 163 -26 192 328 0 0 chr20 40118710 40118768 -32035114 - L2 LINE L2 -206 3066 3009 190 274 16 16 chr20 40119326 40119388 -32034494 + L3 LINE CR1 1382 1443 -134 327 256 13 0 chr20 40119475 40119553 -32034329 + MIR SINE MIR 68 146 -62 618 264 17 22 chr20 40119647 40119825 -32034057 - MIR SINE MIR -64 198 22 379 286 81 12 chr20 40119915 40120076 -32033806 + MIR SINE MIR 79 250 -12 192 130 72 87 chr20 40120523 40120592 -32033290 + MIR SINE MIR 57 124 -84 623 277 6 6 chr20 40120679 40120838 -32033044 + MIR SINE MIR 38 196 -66 415 254 50 99 chr20 40120843 40120961 -32032921 + MER5B DNA MER1_type 4 111 -67 2306 92 3 41 chr20 40120961 40121277 -32032605 - AluSx SINE Alu -8 304 1 415 254 50 99 chr20 40121277 40121339 -32032543 + MER5B DNA MER1_type 111 175 -3 273 211 0 0 chr20 40121451 40121503 -32032379 - MIR SINE MIR -61 147 96 840 261 46 0 chr20 40122158 40122376 -32031506 + MIR SINE MIR 29 256 -6 291 248 194 0 chr20 40122644 40122773 -32031109 + MIR SINE MIR 39 192 -70 784 289 137 21 chr20 40123360 40124084 -32029798 + L2 LINE L2 2492 3311 -2 972 153 16 16 chr20 40124392 40124581 -32029301 - MER5A DNA MER1_type 0 189 1 986 169 6 0 chr20 40124713 40124885 -32028997 + MIR SINE MIR 60 232 -30 810 222 79 0 chr20 40125178 40125381 -32028501 + MER20 DNA MER1_type 1 219 0 2143 125 0 38 chr20 40125645 40125965 -32027917 - AluSx SINE Alu -4 308 1 945 170 64 5 chr20 40125996 40126184 -32027698 - MIR SINE MIR -51 211 13 640 271 77 0 chr20 40126643 40126824 -32027058 - MER117 DNA MER1_type -2 195 1 467 148 16 0 chr20 40127034 40127138 -32026744 + MER5A DNA MER1_type 4 109 -80 228 179 299 51 chr20 40127409 40127526 -32026356 + MIR3 SINE MIR 17 162 -46 198 260 0 20 chr20 40128135 40128185 -32025697 + MIR3 SINE MIR 109 157 -51 628 266 88 76 chr20 40128277 40128698 -32025184 + MLT1K LTR MaLR 152 577 -11 185 267 57 57 chr20 40129007 40129112 -32024770 + L2 LINE L2 2986 3090 -182 589 249 21 53 chr20 40129272 40129461 -32024421 + MLT1L LTR MaLR 125 307 -308 454 225 183 0 chr20 40129859 40130028 -32023854 + MIR SINE MIR 63 262 0 199 213 193 33 chr20 40130018 40130135 -32023747 - MIR SINE MIR -105 157 18 * 218 358 68 20 chr20 40130142 40130290 -32023592 + L2 LINE L2 3106 3260 -12 389 158 12 0 chr20 40130882 40130964 -32022918 + (CTCA)n Simple_repeat Simple_repeat 4 86 0 345 288 27 55 chr20 40130995 40131086 -32022796 + L2 LINE L2 3008 3100 -172 871 147 43 38 chr20 40131086 40131270 -32022612 + MER5A DNA MER1_type 1 185 -4 2415 102 3 0 chr20 40131270 40131574 -32022308 + AluSp SINE Alu 1 305 -8 345 288 27 55 chr20 40131574 40131730 -32022152 + L2 LINE L2 3098 3206 -66 380 333 0 35 chr20 40132056 40132197 -32021685 + L2 LINE L2 2924 3059 -213 637 289 76 0 chr20 40132249 40132460 -32021422 + MIR SINE MIR 24 250 -12 29 0 0 0 chr20 40132977 40133006 -32020876 + AT_rich Low_complexity Low_complexity 1 29 0 2580 53 0 7 chr20 40133008 40133310 -32020572 + AluY SINE Alu 1 300 -11 408 226 121 31 chr20 40133410 40133499 -32020383 + L1MC5 LINE L1 7695 7775 -267 1893 157 3 14 chr20 40133499 40133792 -32020090 + AluJo SINE Alu 1 290 -22 408 226 121 31 chr20 40133792 40134026 -32019856 + L1MC5 LINE L1 7775 8042 0 2029 133 79 16 chr20 40134473 40134840 -32019042 + MLT1B LTR MaLR 1 390 0 308 318 0 23 chr20 40134882 40135011 -32018871 + L2 LINE L2 2934 3059 -213 273 269 0 0 chr20 40135256 40135334 -32018548 - MER5A DNA MER1_type -108 81 4 2115 181 50 24 chr20 40135994 40136458 -32017424 + MLT1D LTR MaLR 23 498 -7 4016 267 94 29 chr20 40136656 40138235 -32015647 - L2 LINE L2 -655 2659 978 190 316 148 6 chr20 40138249 40138581 -32015301 - L2 LINE L2 -2247 1067 689 288 246 0 0 chr20 40138643 40138708 -32015174 - L2 LINE L2 -2616 698 634 399 216 11 0 chr20 40138737 40138825 -32015057 - MIR SINE MIR -86 122 34 688 259 12 112 chr20 40139077 40139417 -32014465 + L2 LINE L2 2918 3223 -49 806 217 106 115 chr20 40139477 40139928 -32013954 + LTR16A1 LTR ERVL 1 447 -10 195 250 0 0 chr20 40139951 40140003 -32013879 + (TAGA)n Simple_repeat Simple_repeat 3 54 0 283 204 0 0 chr20 40140017 40140071 -32013811 - MIR3 SINE MIR -46 162 109 241 246 15 0 chr20 40140476 40140541 -32013341 - MIR SINE MIR 0 262 197 1086 162 12 0 chr20 40140565 40140732 -32013150 - AluJo SINE Alu -17 295 127 473 104 13 0 chr20 40140735 40140812 -32013070 + (TTCC)n Simple_repeat Simple_repeat 3 80 0 313 195 24 73 chr20 40140815 40140897 -32012985 - AluJ/FLAM SINE Alu -223 79 2 483 271 50 7 chr20 40140910 40141050 -32012832 - MIR SINE MIR -74 188 43 287 227 57 34 chr20 40142681 40142769 -32011113 - MER96 DNA MER1_type? -17 158 69 397 262 19 9 chr20 40142993 40143100 -32010782 + MIR SINE MIR 91 198 -64 1382 138 19 31 chr20 40143100 40143361 -32010521 - Tigger5 DNA MER2_type 0 2323 2066 188 67 33 0 chr20 40143453 40143483 -32010399 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 485 263 35 48 chr20 40144177 40144343 -32009539 - MIR SINE MIR -64 144 31 469 333 82 22 chr20 40144476 40144707 -32009175 - MIR SINE MIR -4 258 14 230 268 24 12 chr20 40144975 40145057 -32008825 - MIR SINE MIR 0 262 180 2276 95 0 58 chr20 40145364 40145689 -32008193 - AluSg SINE Alu -4 306 1 725 255 86 59 chr20 40145712 40146002 -32007880 + MLT1K LTR MaLR 126 423 -165 870 193 41 10 chr20 40146829 40147092 -32006790 + L2 LINE L2 2768 3036 -277 411 176 224 8 chr20 40147223 40147348 -32006534 + MLT1K LTR MaLR 398 549 0 358 228 131 73 chr20 40147962 40148221 -32005661 + L2 LINE L2 2836 3109 -163 1510 234 31 100 chr20 40148244 40148470 -32005412 + MLT1D LTR MaLR 1 241 -264 792 137 0 0 chr20 40148470 40148587 -32005295 + FLAM_C SINE Alu 1 117 -16 1510 234 31 100 chr20 40148587 40148610 -32005272 + MLT1D LTR MaLR 241 264 -241 1977 141 27 3 chr20 40148610 40148909 -32004973 + AluSx SINE Alu 1 306 -6 1510 234 31 100 chr20 40148909 40149200 -32004682 + MLT1D LTR MaLR 264 505 0 972 172 17 6 chr20 40149318 40149523 -32004359 - AluSg/x SINE Alu 0 312 137 243 0 0 0 chr20 40149526 40149553 -32004329 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1942 149 0 3 chr20 40149557 40149839 -32004043 - AluJb SINE Alu -31 281 1 183 80 0 0 chr20 40150242 40150267 -32003615 + (TGAA)n Simple_repeat Simple_repeat 2 26 0 221 269 42 76 chr20 40150574 40150693 -32003189 + MIR3 SINE MIR 44 158 -50 366 240 20 27 chr20 40150720 40150866 -32003016 + MER113 DNA MER1_type? 13 157 -364 807 221 32 37 chr20 40150880 40151097 -32002785 + MIR SINE MIR 34 249 -13 216 0 0 0 chr20 40151126 40151150 -32002732 + (TTA)n Simple_repeat Simple_repeat 3 26 0 408 20 0 0 chr20 40151151 40151200 -32002682 + (TG)n Simple_repeat Simple_repeat 1 49 0 2442 119 19 8 chr20 40151200 40151577 -32002305 - LTR9B LTR ERV1 -86 558 178 37 52 0 0 chr20 40151693 40151751 -32002131 + AT_rich Low_complexity Low_complexity 1 58 0 442 272 138 30 chr20 40151793 40152025 -32001857 + MER113 DNA MER1_type? 203 459 -62 2280 121 0 0 chr20 40152231 40152529 -32001353 - AluSx SINE Alu -14 298 1 471 234 52 19 chr20 40152532 40152686 -32001196 - L1ME3 LINE L1 -2 6160 6002 184 278 0 82 chr20 40152755 40152852 -32001030 + MIR SINE MIR 114 202 -60 276 291 121 36 chr20 40153032 40153197 -32000685 - MIR SINE MIR -36 226 48 437 251 68 12 chr20 40154034 40154197 -31999685 - L1ME3 LINE L1 -2 6160 5989 361 291 94 72 chr20 40154226 40154449 -31999433 + L1ME4a LINE L1 5894 6121 0 2238 99 0 3 chr20 40154543 40154848 -31999034 - AluSq SINE Alu 0 304 1 295 274 12 12 chr20 40155071 40155155 -31998727 + MIR3 SINE MIR 117 200 -8 1786 168 20 3 chr20 40155169 40155461 -31998421 + AluJo SINE Alu 1 297 -15 2166 122 3 0 chr20 40155558 40155853 -31998029 + AluSx SINE Alu 1 296 -16 292 240 93 13 chr20 40156139 40156214 -31997668 - Charlie8 DNA MER1_type -2334 83 3 196 339 0 0 chr20 40156271 40156330 -31997552 - L3b LINE CR1 -174 1409 1351 277 257 97 0 chr20 40156428 40156541 -31997341 + MIR3 SINE MIR 14 137 -71 381 268 229 0 chr20 40156643 40156796 -31997086 - MIR SINE MIR -30 232 45 198 324 144 0 chr20 40156825 40156936 -31996946 + L2 LINE L2 2632 2758 -556 21 0 0 0 chr20 40157113 40157134 -31996748 + AT_rich Low_complexity Low_complexity 1 21 0 1966 148 3 17 chr20 40157184 40157481 -31996401 + AluJo SINE Alu 1 293 -19 191 364 45 0 chr20 40157804 40157870 -31996012 + L2 LINE L2 3117 3185 -87 2083 142 3 0 chr20 40157963 40158265 -31995617 + AluSx SINE Alu 1 303 -9 1287 239 64 27 chr20 40158287 40158564 -31995318 - MER113 DNA MER1_type? -29 492 194 2418 77 0 3 chr20 40158564 40158864 -31995018 - AluSq SINE Alu -14 299 1 1287 239 64 27 chr20 40158864 40158991 -31994891 - MER113 DNA MER1_type? -327 194 73 491 306 73 5 chr20 40159232 40159438 -31994444 - L2 LINE L2 -209 3063 2844 382 291 122 9 chr20 40159670 40159883 -31993999 + MIR SINE MIR 22 258 -4 468 174 0 0 chr20 40160103 40160195 -31993687 + (TG)n Simple_repeat Simple_repeat 1 92 0 306 0 0 0 chr20 40160484 40160518 -31993364 + (CA)n Simple_repeat Simple_repeat 1 34 0 212 186 34 17 chr20 40161337 40161396 -31992486 + (CAGAGA)n Simple_repeat Simple_repeat 5 64 0 201 39 0 0 chr20 40161452 40161478 -31992404 + (CGGGG)n Simple_repeat Simple_repeat 2 27 0 23 33 0 0 chr20 40161514 40161544 -31992338 + GC_rich Low_complexity Low_complexity 1 30 0 238 283 119 38 chr20 40161704 40161827 -31992055 + MIR SINE MIR 16 156 -106 351 0 0 0 chr20 40161827 40161866 -31992016 + (ATG)n Simple_repeat Simple_repeat 2 40 0 238 283 119 38 chr20 40161866 40161901 -31991981 + MIR SINE MIR 156 187 -75 847 136 0 21 chr20 40162085 40162225 -31991657 + MLT1A1 LTR MaLR 2 138 -227 380 279 47 0 chr20 40162238 40162324 -31991558 - L1MC4 LINE L1 -1339 6703 6614 334 200 27 40 chr20 40162327 40162402 -31991480 - L1MCa LINE L1 -4358 2068 1995 312 340 0 21 chr20 40162330 40162424 -31991458 + L1MC4 LINE L1 6612 6703 -1339 * 2164 111 0 14 chr20 40162429 40162718 -31991164 - AluSx SINE Alu -27 285 1 1116 127 40 115 chr20 40162718 40162971 -31990911 + MLT1A1 LTR MaLR 132 365 0 358 225 137 81 chr20 40163078 40163362 -31990520 - L2 LINE L2 -90 3223 2924 246 230 130 10 chr20 40163796 40163896 -31989986 - LTR67 LTR ERVL -5 552 441 634 299 24 14 chr20 40164013 40164220 -31989662 - MIR SINE MIR -51 211 3 1093 145 0 0 chr20 40164289 40164455 -31989427 + FRAM SINE Alu 1 166 0 2099 130 3 3 chr20 40164618 40164911 -31988971 + AluSx SINE Alu 3 295 -17 186 43 0 0 chr20 40165062 40165085 -31988797 + (CA)n Simple_repeat Simple_repeat 1 23 0 378 250 152 0 chr20 40165108 40165240 -31988642 + MIR SINE MIR 82 233 -29 6850 177 26 7 chr20 40165273 40165541 -31988341 + L1MA2 LINE L1 3595 3856 -2448 185 0 40 0 chr20 40165541 40165566 -31988316 + (CACAT)n Simple_repeat Simple_repeat 2 27 0 6850 177 26 7 chr20 40165566 40167948 -31985934 + L1MA2 LINE L1 3856 6304 0 502 250 21 35 chr20 40168262 40168406 -31985476 + MIR SINE MIR 109 250 -12 622 276 32 5 chr20 40168573 40168758 -31985124 - MER117 DNA MER1_type -3 194 5 996 291 75 19 chr20 40168887 40169300 -31984582 + LTR16B LTR ERVL 16 451 -13 2380 98 0 3 chr20 40169486 40169783 -31984099 - AluSq SINE Alu -17 296 1 274 133 100 0 chr20 40169784 40169844 -31984038 - MLT1K LTR MaLR -10 578 513 560 246 8 8 chr20 40169982 40170104 -31983778 - MLT1K LTR MaLR -327 261 140 279 260 30 20 chr20 40170638 40170738 -31983144 + MIR SINE MIR 43 143 -65 488 250 25 17 chr20 40170833 40170953 -31982929 - L2 LINE L2 -18 3254 3134 522 117 0 0 chr20 40171098 40171175 -31982707 + AluS SINE Alu 2 78 -233 8811 153 26 17 chr20 40371178 40373066 -31780816 + L1PB1 LINE L1 3539 5461 -690 1673 111 33 120 chr20 40373066 40373400 -31780482 + AluSq SINE Alu 1 305 -8 8811 153 26 17 chr20 40373400 40374096 -31779786 + L1PB1 LINE L1 5461 6149 -2 27 0 0 0 chr20 40374105 40374132 -31779750 + AT_rich Low_complexity Low_complexity 1 27 0 483 220 71 35 chr20 40374132 40374273 -31779609 + L1ME1 LINE L1 5876 6021 -145 350 228 0 0 chr20 40374265 40374344 -31779538 + L1ME2 LINE L1 6076 6154 -10 * 203 293 0 0 chr20 40374371 40374429 -31779453 - MER5A DNA MER1_type -45 144 87 2028 192 61 25 chr20 40374451 40374894 -31778988 + LTR2B LTR ERV1 32 490 0 210 241 37 0 chr20 40374897 40374951 -31778931 - MER5A DNA MER1_type -105 84 29 864 174 42 12 chr20 40375530 40375697 -31778185 + FRAM SINE Alu 4 175 -1 227 322 50 51 chr20 40376143 40376447 -31777435 + L2 LINE L2 2924 3270 -2 180 329 14 0 chr20 40376585 40376655 -31777227 + MIR3 SINE MIR 123 193 -15 210 333 19 9 chr20 40376806 40376914 -31776968 + CT-rich Low_complexity Low_complexity 5 113 0 224 275 25 0 chr20 40377554 40377634 -31776248 + C-rich Low_complexity Low_complexity 2 83 0 248 314 16 33 chr20 40381389 40381510 -31772372 + CT-rich Low_complexity Low_complexity 2 120 0 2175 96 0 7 chr20 40383327 40383666 -31770216 + AluY SINE Alu 1 311 0 412 333 88 0 chr20 40383759 40383975 -31769907 + MIR SINE MIR 15 249 -13 1802 126 15 11 chr20 40383996 40384265 -31769617 + AluSx SINE Alu 43 312 0 511 251 68 31 chr20 40385319 40385482 -31768400 - MIR3 SINE MIR -18 190 22 216 0 0 0 chr20 40386640 40386664 -31767218 + (CA)n Simple_repeat Simple_repeat 1 24 0 29 0 0 0 chr20 40388574 40388603 -31765279 + GC_rich Low_complexity Low_complexity 1 29 0 30 83 0 0 chr20 40388639 40388711 -31765171 + GC_rich Low_complexity Low_complexity 1 72 0 21 0 0 0 chr20 40389108 40389129 -31764753 + AT_rich Low_complexity Low_complexity 1 21 0 468 245 90 37 chr20 40389251 40389439 -31764443 + MIR SINE MIR 47 244 -18 182 227 0 0 chr20 40389563 40389607 -31764275 - L3 LINE CR1 -291 1286 1243 711 191 143 21 chr20 40389652 40389841 -31764041 + AluJb SINE Alu 87 298 -14 183 302 66 66 chr20 40389851 40389957 -31763925 + L2 LINE L2 3202 3307 -6 228 67 0 0 chr20 40390841 40390871 -31763011 + (TG)n Simple_repeat Simple_repeat 1 30 0 189 107 0 0 chr20 40391042 40391070 -31762812 + (CATATA)n Simple_repeat Simple_repeat 2 29 0 861 207 11 35 chr20 40391092 40391266 -31762616 - FAM SINE Alu -2 173 4 6032 98 27 1 chr20 40391336 40392201 -31761681 + L1PA14 LINE L1 5275 6161 0 2290 109 0 3 chr20 40392338 40392649 -31761233 + AluSq SINE Alu 1 310 -3 401 329 81 46 chr20 40393355 40393854 -31760028 + L2 LINE L2 2762 3271 -1 870 321 48 40 chr20 40394977 40395372 -31758510 + MLT1E LTR MaLR 22 419 -174 633 296 97 49 chr20 40395473 40395939 -31757943 + L1ME3A LINE L1 347 834 -5285 248 233 194 0 chr20 40396609 40396712 -31757170 - L2 LINE L2 -871 2443 2321 242 292 88 18 chr20 40396843 40396956 -31756926 + MER65A LTR ERV1 2 122 -323 286 323 50 50 chr20 40397094 40397354 -31756528 + MER65A LTR ERV1 186 445 0 1022 291 71 14 chr20 40397641 40398300 -31755582 + L2 LINE L2 2616 3309 -4 543 228 16 31 chr20 40398300 40398493 -31755389 + L1ME3A LINE L1 3777 3966 -2163 288 281 120 16 chr20 40398490 40398682 -31755200 + L1ME3A LINE L1 4488 4699 -1430 * 1915 220 37 26 chr20 40398879 40399369 -31754513 + MLT1D LTR MaLR 1 495 -10 1056 278 107 25 chr20 40399369 40400407 -31753475 + L1ME3A LINE L1 4906 6010 -94 31 44 0 0 chr20 40400699 40400744 -31753138 + AT_rich Low_complexity Low_complexity 1 45 0 2211 123 29 45 chr20 40400828 40401209 -31752673 - THE1C LTR MaLR 0 375 1 438 56 106 0 chr20 40402228 40402370 -31751512 + (TA)n Simple_repeat Simple_repeat 2 158 0 2551 57 0 0 chr20 40402504 40402801 -31751081 - AluY SINE Alu -14 297 1 37 69 0 0 chr20 40402872 40402944 -31750938 + AT_rich Low_complexity Low_complexity 1 72 0 245 164 0 18 chr20 40404307 40404362 -31749520 + (TATATG)n Simple_repeat Simple_repeat 3 56 0 544 146 0 0 chr20 40404401 40404497 -31749385 + L1MA5 LINE L1 6200 6295 -5 227 133 22 0 chr20 40404640 40404685 -31749197 + (TA)n Simple_repeat Simple_repeat 1 46 0 482 257 0 9 chr20 40404960 40405073 -31748809 + L2 LINE L2 3197 3308 -5 411 391 38 21 chr20 40405084 40405635 -31748247 + L2 LINE L2 2710 3270 -2 1906 170 13 0 chr20 40405798 40406098 -31747784 + AluJb SINE Alu 1 304 -8 975 128 41 25 chr20 40407259 40407455 -31746427 + L1MA5 LINE L1 6101 6299 -1 1459 208 46 37 chr20 40407456 40408226 -31745656 + L1M4c LINE L1 1446 2313 -4071 21 36 0 0 chr20 40408353 40408381 -31745501 + AT_rich Low_complexity Low_complexity 1 28 0 332 236 109 36 chr20 40408768 40408878 -31745004 - L2 LINE L2 -1 3312 3195 2006 130 0 0 chr20 40409002 40409272 -31744610 - AluSx SINE Alu -42 270 1 233 261 39 78 chr20 40409713 40409818 -31744064 - L2 LINE L2 -5 3308 3209 2324 108 0 0 chr20 40409818 40410123 -31743759 - AluSq SINE Alu -8 305 1 233 261 39 78 chr20 40410123 40410170 -31743712 - L2 LINE L2 -104 3209 3162 1842 113 3 65 chr20 40410610 40410903 -31742979 - AluSx SINE Alu -1 311 37 711 127 0 18 chr20 40410905 40411015 -31742867 - FLAM_C SINE Alu -9 134 27 682 158 0 0 chr20 40411017 40411118 -31742764 + FLAM_C SINE Alu 3 103 -40 930 211 25 0 chr20 40411118 40411225 -31742657 + L1M2c LINE L1 1930 2033 -4756 2285 97 3 23 chr20 40411225 40411535 -31742347 + AluSg SINE Alu 1 304 -6 930 211 25 0 chr20 40411535 40411971 -31741911 + L1M2c LINE L1 2033 2551 -4238 461 148 13 8 chr20 40411990 40412221 -31741661 + AluSq SINE Alu 5 313 0 2228 106 0 0 chr20 40415302 40415605 -31738277 - AluSg SINE Alu -7 303 1 1687 178 0 7 chr20 40416993 40417291 -31736591 - AluJo SINE Alu -16 296 1 413 226 39 49 chr20 40417402 40417504 -31736378 + MER8 DNA MER2_type 3 103 -136 920 219 0 5 chr20 40417504 40417691 -31736191 + AluJb SINE Alu 117 302 -10 1294 47 3 27 chr20 40417709 40418346 -31735536 + (CCCTAA)n Simple_repeat Simple_repeat 1 621 0 275 174 0 58 chr20 40418347 40418416 -31735466 + (CCCCAA)n Simple_repeat Simple_repeat 6 70 0 1131 58 9 27 chr20 40418419 40418643 -31735239 + (CCCTAA)n Simple_repeat Simple_repeat 1 220 0 3992 195 47 54 chr20 40418643 40420147 -31733735 - TAR1 Satellite telomeric -782 1493 1 1162 176 67 133 chr20 40419992 40420458 -31733424 - LTR60 LTR ERV1 -43 543 109 * 473 229 19 0 chr20 40420497 40420602 -31733280 - LTR60 LTR ERV1 -479 107 1 1236 224 91 17 chr20 40420618 40421225 -31732657 + L1MC/D LINE L1 4898 5546 -745 2745 167 49 9 chr20 40421230 40421756 -31732126 + MER34C LTR ERV1 37 583 -2 509 278 27 16 chr20 40421761 40421948 -31731934 + L1MC/D LINE L1 5577 5765 -2020 3561 145 77 50 chr20 40422240 40422889 -31730993 + MER72 LTR ERV1 1 672 -50 2190 108 0 0 chr20 40422889 40423175 -31730707 + AluSq SINE Alu 21 306 -7 3561 145 77 50 chr20 40423175 40423228 -31730654 + MER72 LTR ERV1 672 722 0 3756 194 47 37 chr20 40423305 40423826 -31730056 + L1MB5 LINE L1 5224 5762 -412 2236 89 4 0 chr20 40423826 40424131 -31729751 + AluSq SINE Alu 1 306 0 3756 194 47 37 chr20 40424131 40424549 -31729333 + L1MB5 LINE L1 5762 6174 0 799 236 46 92 chr20 40425788 40426136 -31727746 + MLT1B LTR MaLR 2 333 -57 1909 179 40 30 chr20 40428239 40428787 -31725095 + MLT2A2 LTR ERVL 1 554 0 2211 119 0 3 chr20 40432512 40432806 -31721076 - AluSx SINE Alu -19 293 1 193 270 45 45 chr20 40434642 40434731 -31719151 + L2 LINE L2 2564 2652 -662 243 224 29 52 chr20 40435006 40435180 -31718702 + (CACAC)n Simple_repeat Simple_repeat 5 174 0 268 228 17 56 chr20 40435398 40435578 -31718304 + (CACAC)n Simple_repeat Simple_repeat 2 174 0 650 236 163 26 chr20 40435729 40436072 -31717810 + MER110A LTR ERV1 41 430 -38 186 340 31 21 chr20 40436329 40436426 -31717456 + L2 LINE L2 2958 3055 -217 253 270 112 20 chr20 40437619 40437771 -31716111 + L1MC5 LINE L1 7277 7442 -519 300 326 87 27 chr20 40438434 40438618 -31715264 + L1 LINE L1 4439 4633 -1513 1357 217 36 7 chr20 40438664 40438786 -31715096 + AluJo SINE Alu 2 119 -193 2369 71 0 4 chr20 40438786 40439107 -31714775 + AluSg SINE Alu 1 320 0 1357 217 36 7 chr20 40439107 40439260 -31714622 + AluJo SINE Alu 119 286 -26 211 208 52 0 chr20 40439609 40439686 -31714196 + GA-rich Low_complexity Low_complexity 1 81 0 265 258 186 6 chr20 40439739 40439899 -31713983 + MIR SINE MIR 54 258 -4 434 302 20 39 chr20 40441519 40441779 -31712103 + L1ME3 LINE L1 5913 6156 -6 2084 138 0 3 chr20 40443072 40443368 -31710514 - AluSx SINE Alu -13 299 5 696 194 52 0 chr20 40443776 40443910 -31709972 - FRAM SINE Alu -31 145 5 209 323 10 42 chr20 40443927 40444023 -31709859 + L2 LINE L2 2476 2568 -746 1566 189 54 0 chr20 40444349 40444645 -31709237 + AluJo SINE Alu 1 312 0 2264 115 0 3 chr20 40445653 40445966 -31707916 + AluSx SINE Alu 1 312 0 220 269 11 54 chr20 40447467 40447560 -31706322 - MIR SINE MIR -160 102 14 225 222 0 48 chr20 40448341 40448404 -31705478 + Tigger5 DNA MER2_type 1 60 -2263 * 263 208 0 0 chr20 40448381 40448429 -31705453 + Tigger5 DNA MER2_type 2275 2322 -1 226 283 194 22 chr20 40448429 40448609 -31705273 + L3 LINE CR1 1256 1466 -111 189 0 0 0 chr20 40449446 40449467 -31704415 + (CGG)n Simple_repeat Simple_repeat 2 22 0 234 0 0 0 chr20 40449593 40449619 -31704263 + (CCG)n Simple_repeat Simple_repeat 2 27 0 411 189 89 0 chr20 40450048 40450138 -31703744 + MER4A LTR ERV1 1 98 -566 1576 139 14 75 chr20 40450138 40450506 -31703376 + MER4A LTR ERV1 261 664 0 4789 88 3 3 chr20 40451078 40451738 -31702144 - PABL_A LTR ERV1 0 660 1 296 242 20 61 chr20 40451861 40451889 -31701993 - MIR SINE MIR -93 169 141 1259 227 149 41 chr20 40451889 40452404 -31701478 + MER90 LTR ERV1 5 575 0 296 242 20 61 chr20 40452404 40452474 -31701408 - MIR SINE MIR -121 141 75 187 250 75 0 chr20 40452619 40452699 -31701183 - L2 LINE L2 -332 2981 2896 627 159 117 0 chr20 40452751 40452896 -31700986 - L1MB4 LINE L1 -1 6179 6018 * 1285 244 21 47 chr20 40452881 40452920 -31700962 + L1MC2 LINE L1 3930 3968 -2178 2371 94 0 0 chr20 40452920 40453219 -31700663 + AluSg SINE Alu 1 299 -11 1285 244 21 47 chr20 40453219 40453561 -31700321 + L1MC2 LINE L1 3968 4301 -1845 239 169 211 42 chr20 40453561 40453632 -31700250 - Tigger7 DNA MER2_type 0 2491 2409 * 1194 132 0 41 chr20 40453609 40453829 -31700053 - Tigger7 DNA MER2_type -22 2465 2255 1347 201 29 0 chr20 40453833 40454072 -31699810 - Tigger7 DNA MER2_type -486 247 2 2895 229 86 2 chr20 40454072 40454889 -31698993 + L1MC2 LINE L1 4299 5183 -963 3128 163 50 60 chr20 40454890 40455390 -31698492 + L1MC2 LINE L1 5607 6098 -246 1681 136 89 7 chr20 40455390 40455670 -31698212 + AluJb SINE Alu 1 303 -9 3128 163 50 60 chr20 40455670 40455913 -31697969 + L1MC2 LINE L1 6098 6342 -2 510 250 58 0 chr20 40455926 40456098 -31697784 + L1MEc LINE L1 1651 1832 -4564 21 0 0 0 chr20 40456192 40456213 -31697669 + AT_rich Low_complexity Low_complexity 1 21 0 2181 98 30 10 chr20 40456242 40456539 -31697343 - AluSx SINE Alu -7 305 3 22 0 0 0 chr20 40457072 40457094 -31696788 + GC_rich Low_complexity Low_complexity 1 22 0 310 132 19 0 chr20 40457464 40457517 -31696365 + MLT2B1 LTR ERVL 467 520 0 367 289 58 42 chr20 40459078 40459268 -31694614 + MIR SINE MIR 14 206 -56 960 297 165 22 chr20 40461235 40461828 -31692054 + HAL1 LINE L1 5 682 -1825 350 308 8 23 chr20 40462518 40462648 -31691234 - MLT1K LTR MaLR -49 539 412 27 73 0 0 chr20 40463505 40463560 -31690322 + AT_rich Low_complexity Low_complexity 1 55 0 27 29 0 0 chr20 40463698 40463732 -31690150 + AT_rich Low_complexity Low_complexity 1 34 0 373 329 53 53 chr20 40467316 40467562 -31686320 - MIR SINE MIR -9 253 8 391 274 114 60 chr20 40471606 40471807 -31682075 + L2 LINE L2 3102 3313 0 205 237 13 13 chr20 40471827 40471903 -31681979 + G-rich Low_complexity Low_complexity 3 78 0 710 105 5 63 chr20 40471908 40472099 -31681783 + (GGGGA)n Simple_repeat Simple_repeat 1 180 0 305 280 40 29 chr20 40475857 40476032 -31677850 + (GGGTG)n Simple_repeat Simple_repeat 3 179 0 342 278 47 6 chr20 40476046 40476215 -31677667 + (GGGTG)n Simple_repeat Simple_repeat 5 180 0 242 303 101 0 chr20 40476703 40476792 -31677090 + MIR3 SINE MIR 60 157 -51 382 349 8 0 chr20 40477216 40477345 -31676537 + MIR SINE MIR 31 160 -102 915 208 0 0 chr20 40477561 40477900 -31675982 + (CCA)n Simple_repeat Simple_repeat 1 339 0 612 240 0 0 chr20 40477869 40478048 -31675834 + (CAT)n Simple_repeat Simple_repeat 2 180 0 * 1228 189 113 76 chr20 40478172 40478496 -31675386 - MSTD LTR MaLR -12 384 42 2112 100 0 7 chr20 40478496 40478797 -31675085 + AluSg SINE Alu 1 299 0 1228 189 113 76 chr20 40478797 40478841 -31675041 - MSTD LTR MaLR -354 42 1 692 149 47 0 chr20 40478909 40479057 -31674825 + L1MB5 LINE L1 5789 5943 -231 2171 104 7 7 chr20 40479057 40479366 -31674516 + AluSc SINE Alu 1 309 0 425 211 32 0 chr20 40479404 40479499 -31674383 - L1ME2 LINE L1 -30 6134 6037 2044 106 10 26 chr20 40479503 40479805 -31674077 + AluSx SINE Alu 5 301 -11 533 188 5 48 chr20 40481287 40481473 -31672409 + G-rich Low_complexity Low_complexity 1 178 0 2391 59 0 0 chr20 40484034 40484322 -31669560 - AluSq SINE Alu -25 288 1 216 222 0 19 chr20 40489805 40489859 -31664023 + GA-rich Low_complexity Low_complexity 2 54 0 303 310 109 6 chr20 40493303 40493477 -31660405 + MIR SINE MIR 28 219 -43 192 40 0 0 chr20 40494735 40494760 -31659122 + (CTG)n Simple_repeat Simple_repeat 1 25 0 1240 189 28 65 chr20 40498658 40498949 -31654933 + AluJo SINE Alu 1 280 -32 183 42 0 0 chr20 40498951 40498975 -31654907 + (TAA)n Simple_repeat Simple_repeat 1 24 0 286 329 114 5 chr20 40499359 40499578 -31654304 + L3 LINE CR1 638 880 -697 398 380 0 0 chr20 40500153 40500332 -31653550 + (CA)n Simple_repeat Simple_repeat 1 179 0 225 243 0 0 chr20 40500759 40500829 -31653053 + (CA)n Simple_repeat Simple_repeat 1 70 0 279 233 0 0 chr20 40502287 40502390 -31651492 + C-rich Low_complexity Low_complexity 6 108 0 233 333 81 11 chr20 40503728 40503815 -31650067 - MIR SINE MIR -121 141 49 993 101 0 0 chr20 40506437 40506585 -31647297 + (TCC)n Simple_repeat Simple_repeat 2 149 0 23 0 0 0 chr20 40507319 40507342 -31646540 + AT_rich Low_complexity Low_complexity 1 23 0 1801 114 92 0 chr20 40507373 40507646 -31646236 + AluSx SINE Alu 5 302 -10 301 196 10 21 chr20 40510968 40511065 -31642817 + GA-rich Low_complexity Low_complexity 4 99 0 2731 10 0 7 chr20 40516239 40516549 -31637333 - AluY SINE Alu -3 308 1 198 0 0 0 chr20 40517647 40517669 -31636213 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 2254 105 0 0 chr20 40518857 40519151 -31634731 + AluSx SINE Alu 1 294 -18 387 0 0 0 chr20 40519155 40519198 -31634684 + (CA)n Simple_repeat Simple_repeat 2 44 0 1688 104 154 0 chr20 40519399 40519659 -31634223 + AluSg SINE Alu 1 300 0 224 211 0 0 chr20 40520436 40520474 -31633408 + (TGGA)n Simple_repeat Simple_repeat 2 39 0 816 163 22 6 chr20 40522655 40522833 -31631049 + MER96B DNA MER1_type? 67 247 -170 2174 123 0 0 chr20 40523554 40523856 -31630026 - AluSx SINE Alu 0 312 11 1848 120 4 33 chr20 40523886 40524161 -31629721 - AluSx SINE Alu -45 267 1 245 275 88 25 chr20 40527906 40527986 -31625896 + MIR SINE MIR 65 149 -59 203 274 0 4 chr20 40529774 40529869 -31624013 + L2 LINE L2 2431 2561 -753 3771 201 60 13 chr20 40529888 40530433 -31623449 + L1MB7 LINE L1 4612 5130 -1054 2092 126 3 0 chr20 40530433 40530727 -31623155 + AluSx SINE Alu 1 295 -17 3771 201 60 13 chr20 40530727 40531686 -31622196 + L1MB7 LINE L1 5130 6182 -2 992 282 79 25 chr20 40533056 40533624 -31620258 + HAL1 LINE L1 1064 1662 -845 637 304 8 21 chr20 40534114 40534357 -31619525 + L1MC4 LINE L1 6464 6703 -1339 322 211 9 44 chr20 40534372 40534514 -31619368 + (TG)n Simple_repeat Simple_repeat 1 137 0 490 238 5 38 chr20 40534534 40534719 -31619163 + (TG)n Simple_repeat Simple_repeat 2 180 0 257 214 36 0 chr20 40534796 40534852 -31619030 + L1MC3 LINE L1 6708 6765 -1020 302 250 138 0 chr20 40534903 40535019 -31618863 + L1MC4 LINE L1 6938 7069 -973 539 255 11 33 chr20 40535029 40535213 -31618669 + L1MC4 LINE L1 7234 7413 -629 354 372 81 0 chr20 40536045 40536193 -31617689 + L1MC4 LINE L1 7515 7674 -368 1930 118 66 0 chr20 40541524 40541813 -31612069 + AluSx SINE Alu 1 308 -4 1715 120 18 35 chr20 40543334 40543617 -31610265 + AluSx SINE Alu 1 278 -34 459 0 0 0 chr20 40543617 40543668 -31610214 + (TC)n Simple_repeat Simple_repeat 2 52 0 333 0 0 0 chr20 40543667 40543704 -31610178 + (TA)n Simple_repeat Simple_repeat 1 37 0 * 224 214 0 0 chr20 40553412 40553454 -31600428 + (CA)n Simple_repeat Simple_repeat 1 42 0 180 313 84 0 chr20 40555091 40555174 -31598708 + MIR SINE MIR 35 124 -138 317 301 145 4 chr20 40555280 40555529 -31598353 - L2 LINE L2 -805 2509 2226 283 303 0 49 chr20 40555637 40555822 -31598060 + G-rich Low_complexity Low_complexity 4 179 0 277 354 0 12 chr20 40555839 40556000 -31597882 + (CGGGG)n Simple_repeat Simple_repeat 1 159 0 290 244 28 44 chr20 40556201 40556381 -31597501 + (CAGGA)n Simple_repeat Simple_repeat 3 179 0 * 388 291 6 28 chr20 40556353 40556535 -31597347 + (CAGGG)n Simple_repeat Simple_repeat 3 180 0 300 314 40 29 chr20 40556454 40556629 -31597253 + G-rich Low_complexity Low_complexity 2 178 0 * 345 280 0 0 chr20 40556724 40556799 -31597083 + MIR SINE MIR 85 159 -103 201 297 39 19 chr20 40558753 40558908 -31594974 + (CAGAGA)n Simple_repeat Simple_repeat 6 163 0 348 143 54 0 chr20 40560620 40560732 -31593150 + (CA)n Simple_repeat Simple_repeat 2 119 0 655 117 47 0 chr20 40560746 40560917 -31592965 + (CA)n Simple_repeat Simple_repeat 1 179 0 619 134 41 6 chr20 40560945 40561116 -31592766 + (CA)n Simple_repeat Simple_repeat 1 177 0 2024 139 10 0 chr20 40561681 40561983 -31591899 + AluSg SINE Alu 1 305 -5 191 212 0 0 chr20 40563385 40563418 -31590464 + L2 LINE L2 3181 3213 -100 198 253 11 5 chr20 40563970 40564051 -31589831 - MIR3 SINE MIR -54 154 31 381 336 0 1 chr20 40564169 40564866 -31589016 + (TG)n Simple_repeat Simple_repeat 1 696 0 1756 125 7 11 chr20 40565911 40566620 -31587262 + MER4A LTR ERV1 1 779 0 360 329 15 26 chr20 40569974 40570214 -31583668 + (CATA)n Simple_repeat Simple_repeat 1 237 0 * 409 326 0 33 chr20 40570168 40570349 -31583533 + (CATATA)n Simple_repeat Simple_repeat 2 176 0 * 494 349 6 13 chr20 40570296 40570642 -31583240 + (CA)n Simple_repeat Simple_repeat 1 343 0 987 122 6 45 chr20 40572358 40572514 -31581368 - FRAM SINE Alu -13 153 4 2282 69 7 7 chr20 40572528 40572831 -31581051 - AluY SINE Alu -8 303 1 376 253 101 0 chr20 40574708 40574807 -31579075 - MER81 DNA DNA -1 113 5 183 42 0 0 chr20 40574904 40574928 -31578954 + (CCCTAA)n Simple_repeat Simple_repeat 4 27 0 2264 94 0 10 chr20 40575553 40575860 -31578022 + AluY SINE Alu 1 304 -7 489 270 230 5 chr20 40576068 40576272 -31577610 + MIR SINE MIR 2 251 -11 305 252 63 9 chr20 40576989 40577100 -31576782 + LTR33 LTR ERVL 404 520 -1 767 153 0 62 chr20 40577310 40577454 -31576428 + FLAM_A SINE Alu 8 142 0 897 103 0 0 chr20 40577554 40577671 -31576211 + AluSq/x SINE Alu 21 137 -175 422 99 14 70 chr20 40577671 40577742 -31576140 + AluJo SINE Alu 68 134 -178 333 345 25 20 chr20 40577828 40578031 -31575851 + L1MC/D LINE L1 5552 5755 -2053 1557 58 0 0 chr20 40579690 40579881 -31574001 + L1PA4 LINE L1 5962 6152 -3 21 36 0 0 chr20 40579937 40579965 -31573917 + AT_rich Low_complexity Low_complexity 1 28 0 1214 221 122 38 chr20 40583909 40584289 -31569593 - MLT1C LTR MaLR -5 462 41 2238 74 7 7 chr20 40584289 40584588 -31569294 - AluSc SINE Alu -10 299 1 1214 221 122 38 chr20 40584588 40584633 -31569249 - MLT1C LTR MaLR -426 41 1 279 200 29 0 chr20 40584748 40584818 -31569064 - LTR37A LTR ERV1 -242 184 113 1163 164 27 9 chr20 40585342 40585561 -31568321 + AluJo SINE Alu 74 296 -16 3248 219 114 8 chr20 40585567 40586659 -31567223 + L1M4 LINE L1 3583 4789 -1357 225 111 0 44 chr20 40586763 40586808 -31567074 + L1M4 LINE L1 4744 4786 -1360 * 235 125 0 42 chr20 40586801 40586849 -31567033 + L1M4 LINE L1 4744 4789 -1357 235 89 0 44 chr20 40586839 40586884 -31566998 + L1M4 LINE L1 4744 4786 -1360 239 89 0 44 chr20 40586953 40586998 -31566884 + L1M4 LINE L1 4744 4786 -1360 244 104 0 42 chr20 40587029 40587077 -31566805 + L1M4 LINE L1 4744 4789 -1357 235 125 0 42 chr20 40587181 40587229 -31566653 + L1M4 LINE L1 4744 4789 -1357 235 89 0 44 chr20 40587219 40587264 -31566618 + L1M4 LINE L1 4744 4786 -1360 244 104 0 42 chr20 40587447 40587495 -31566387 + L1M4 LINE L1 4744 4789 -1357 225 111 0 44 chr20 40587599 40587644 -31566238 + L1M4 LINE L1 4744 4786 -1360 * 235 125 0 42 chr20 40587637 40587685 -31566197 + L1M4 LINE L1 4744 4789 -1357 225 146 0 42 chr20 40587713 40587761 -31566121 + L1M4 LINE L1 4744 4789 -1357 * 235 89 0 44 chr20 40587751 40587796 -31566086 + L1M4 LINE L1 4744 4786 -1360 235 89 0 44 chr20 40588544 40588589 -31565293 + L1M4 LINE L1 4744 4786 -1360 235 89 0 44 chr20 40588998 40589043 -31564839 + L1M4 LINE L1 4744 4786 -1360 226 125 0 42 chr20 40589263 40589311 -31564571 + L1M4 LINE L1 4744 4789 -1357 238 135 0 0 chr20 40589756 40589793 -31564089 + Alu SINE Alu 2 38 -262 2341 78 7 13 chr20 40589837 40589971 -31563911 + AluSx SINE Alu 3 136 -176 2348 85 0 0 chr20 40589971 40590278 -31563604 + AluY SINE Alu 1 307 -4 2341 78 7 13 chr20 40590278 40590451 -31563431 + AluSx SINE Alu 136 308 -4 1856 92 45 41 chr20 40590455 40590747 -31563135 + AluSx SINE Alu 1 293 -19 26 0 0 0 chr20 40590817 40590843 -31563039 + AT_rich Low_complexity Low_complexity 1 26 0 2376 85 0 7 chr20 40592330 40592637 -31561245 - AluSq SINE Alu -8 305 1 253 339 57 0 chr20 40592811 40592935 -31560947 + Charlie4 DNA MER1_type 1743 1873 -88 194 237 0 0 chr20 40595285 40595323 -31558559 + MIR SINE MIR 109 146 -116 198 244 322 15 chr20 40595773 40596043 -31557839 + L2 LINE L2 2623 2975 -339 1111 141 11 5 chr20 40596205 40596378 -31557504 - AluSg/x SINE Alu -4 306 130 2138 108 0 46 chr20 40596378 40596701 -31557181 - AluSx SINE Alu -1 311 4 1111 141 11 5 chr20 40596701 40596712 -31557170 - AluSg/x SINE Alu -180 130 121 507 286 7 14 chr20 40596713 40596853 -31557029 + L2 LINE L2 3172 3310 -3 253 216 32 65 chr20 40601826 40602011 -31551871 + (CCCG)n Simple_repeat Simple_repeat 2 180 0 257 189 27 14 chr20 40602110 40602184 -31551698 + (CCG)n Simple_repeat Simple_repeat 2 76 0 * 262 184 41 20 chr20 40602129 40602227 -31551655 + (CCGCG)n Simple_repeat Simple_repeat 5 104 0 244 288 0 0 chr20 40602385 40602465 -31551417 + G-rich Low_complexity Low_complexity 1 80 0 21 0 0 0 chr20 40603039 40603060 -31550822 + GC_rich Low_complexity Low_complexity 1 21 0 24 67 0 0 chr20 40603755 40603800 -31550082 + AT_rich Low_complexity Low_complexity 1 45 0 2225 82 26 0 chr20 40604559 40604862 -31549020 - AluY SINE Alu 0 311 1 249 224 129 0 chr20 40607030 40607115 -31546767 - L1MB7 LINE L1 -40 6144 6049 226 118 0 0 chr20 40607121 40607155 -31546727 - tRNA-Cys-TGC tRNA tRNA -40 35 2 330 170 330 0 chr20 40607162 40607256 -31546626 - FLAM_C SINE Alu -8 125 1 252 0 0 0 chr20 40607256 40607284 -31546598 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 483 129 129 40 chr20 40607284 40607385 -31546497 - FAM SINE Alu -28 157 48 1202 188 66 110 chr20 40607411 40607848 -31546034 - L1MB7 LINE L1 -109 6075 5658 2486 65 7 0 chr20 40608108 40608417 -31545465 - AluSx SINE Alu -1 311 1 202 201 0 112 chr20 40608445 40608579 -31545303 + C-rich Low_complexity Low_complexity 2 120 0 * 271 282 9 27 chr20 40608481 40608591 -31545291 + (CCCCG)n Simple_repeat Simple_repeat 1 108 0 277 284 108 0 chr20 40610098 40610200 -31543682 - L2 LINE L2 -5 3267 3155 419 263 165 0 chr20 40611450 40611583 -31542299 + MIR SINE MIR 46 200 -62 27 0 0 0 chr20 40612748 40612775 -31541107 + GC_rich Low_complexity Low_complexity 1 27 0 28 29 0 0 chr20 40612963 40612998 -31540884 + GC_rich Low_complexity Low_complexity 1 35 0 681 246 15 41 chr20 40616018 40616213 -31537669 + Tigger3(Golem) DNA MER2_type 2839 3028 -1 192 276 35 0 chr20 40616575 40616633 -31537249 + MIR3 SINE MIR 110 169 -39 1159 70 9 3 chr20 40617531 40617759 -31536123 + AluSx SINE Alu 1 293 -17 2363 84 7 0 chr20 40619635 40619943 -31533939 - AluSg SINE Alu 0 310 1 1919 113 3 25 chr20 40622175 40622459 -31531423 - AluSx SINE Alu -34 278 1 1766 118 69 0 chr20 40624514 40624801 -31529081 - AluY SINE Alu 0 305 1 2259 80 10 0 chr20 40624812 40625113 -31528769 - AluSp SINE Alu -9 304 1 2047 121 0 0 chr20 40628730 40629010 -31524872 + AluSx SINE Alu 1 280 -32 252 0 0 0 chr20 40629321 40629349 -31524533 + (CA)n Simple_repeat Simple_repeat 1 28 0 204 40 0 0 chr20 40629378 40629403 -31524479 + (CA)n Simple_repeat Simple_repeat 1 25 0 309 354 0 14 chr20 40629417 40629561 -31524321 + (CA)n Simple_repeat Simple_repeat 1 142 0 186 43 0 0 chr20 40629590 40629613 -31524269 + (CA)n Simple_repeat Simple_repeat 1 23 0 198 118 0 0 chr20 40629696 40629730 -31524152 + (CA)n Simple_repeat Simple_repeat 1 34 0 231 61 0 0 chr20 40629761 40629794 -31524088 + (CA)n Simple_repeat Simple_repeat 1 33 0 240 184 0 0 chr20 40629952 40630001 -31523881 + (CA)n Simple_repeat Simple_repeat 1 49 0 195 129 0 0 chr20 40630021 40630052 -31523830 + (CA)n Simple_repeat Simple_repeat 1 31 0 2128 123 0 0 chr20 40630259 40630552 -31523330 + AluSx SINE Alu 9 301 -11 2247 89 0 3 chr20 40630912 40631205 -31522677 - AluSx SINE Alu -20 292 1 1822 107 0 48 chr20 40631967 40632257 -31521625 + AluSx SINE Alu 37 312 0 266 337 31 18 chr20 40632405 40632568 -31521314 + L1MC4 LINE L1 7008 7172 -870 731 151 42 8 chr20 40632578 40632697 -31521185 + FLAM_C SINE Alu 3 125 -18 252 200 60 40 chr20 40632700 40632800 -31521082 + L1MC4a LINE L1 7051 7152 -656 * 932 252 178 52 chr20 40632790 40633131 -31520751 + L1MC4 LINE L1 7287 7584 -458 1806 151 35 0 chr20 40633131 40633416 -31520466 - AluJo SINE Alu -17 295 1 932 252 178 52 chr20 40633416 40633654 -31520228 + L1MC4 LINE L1 7584 7939 -103 302 122 14 40 chr20 40633655 40633699 -31520183 + AluS SINE Alu 1 42 -261 293 108 15 15 chr20 40633699 40633743 -31520139 + Alu SINE Alu 1 44 -257 295 92 15 15 chr20 40633743 40633787 -31520095 + Alu SINE Alu 1 44 -257 287 68 0 0 chr20 40633787 40633831 -31520051 + Alu SINE Alu 1 44 -255 417 208 77 60 chr20 40633831 40634007 -31519875 + AluSx SINE Alu 1 179 -133 426 68 14 40 chr20 40634007 40634081 -31519801 + AluS SINE Alu 1 72 -241 2348 69 0 13 chr20 40634095 40634400 -31519482 + AluY SINE Alu 1 301 -10 364 261 82 118 chr20 40634803 40634914 -31518968 + L1ME2 LINE L1 5326 5439 -2369 2109 97 10 23 chr20 40634914 40635222 -31518660 + AluSg SINE Alu 1 304 -6 1317 206 48 11 chr20 40635222 40635492 -31518390 - AluJo SINE Alu -30 282 1 364 261 82 118 chr20 40635492 40635743 -31518139 + L1ME2 LINE L1 5437 5676 -2132 288 222 173 0 chr20 40636099 40636180 -31517702 - Tigger5 DNA MER2_type -2228 95 1 297 194 29 29 chr20 40636180 40636283 -31517599 + L1MB7 LINE L1 5225 5327 -819 * 428 215 65 17 chr20 40636252 40636417 -31517465 + L1MB7 LINE L1 5758 5923 -255 1295 158 94 34 chr20 40636425 40636643 -31517239 + MER47A DNA MER2_type 51 294 -2029 2035 108 3 14 chr20 40636643 40636965 -31516917 - AluSq SINE Alu 0 319 1 1295 158 94 34 chr20 40636965 40637043 -31516839 + MER47A DNA MER2_type 294 366 0 757 238 57 12 chr20 40637043 40637101 -31516781 + L1MB7 LINE L1 5922 5976 -208 1852 145 3 19 chr20 40637101 40637412 -31516470 + AluJb SINE Alu 4 309 -3 757 238 57 12 chr20 40637412 40637597 -31516285 + L1MB7 LINE L1 5976 6176 -8 1628 178 46 23 chr20 40637599 40637902 -31515980 + AluJo SINE Alu 2 311 -1 1728 127 8 30 chr20 40638113 40638380 -31515502 + AluSx SINE Alu 41 301 -11 368 228 26 26 chr20 40641275 40641389 -31512493 + L1MC5 LINE L1 6754 6867 -1094 942 214 33 66 chr20 40641397 40641600 -31512282 + L1ME2 LINE L1 5842 6033 -131 2058 126 3 0 chr20 40641600 40641893 -31511989 - AluSx SINE Alu -14 298 5 942 214 33 66 chr20 40641893 40641992 -31511890 + L1ME2 LINE L1 6033 6134 -30 2286 82 10 3 chr20 40642030 40642335 -31511547 - AluSc SINE Alu -2 307 1 581 260 48 100 chr20 40642368 40642787 -31511095 + L1MC5 LINE L1 6832 7228 -733 236 215 32 21 chr20 40642910 40643003 -31510879 + L1MC5 LINE L1 7299 7392 -569 2058 118 3 0 chr20 40643272 40643560 -31510322 + AluSx SINE Alu 12 300 -12 1859 156 0 20 chr20 40643579 40643880 -31510002 + AluJb SINE Alu 9 303 -9 300 174 20 20 chr20 40643880 40643978 -31509904 + G-rich Low_complexity Low_complexity 1 98 0 398 317 63 19 chr20 40644112 40644383 -31509499 + ERVL LTR ERVL 3434 3716 -2048 443 181 9 29 chr20 40645088 40645193 -31508689 + MER4D LTR ERV1 800 902 -1 1980 193 45 6 chr20 40645194 40645707 -31508175 - L1M4 LINE L1 -852 5294 4762 1945 120 7 7 chr20 40645742 40646026 -31507856 - AluSx SINE Alu 0 312 29 449 234 26 71 chr20 40646113 40646145 -31507737 + MER5B DNA MER1_type 27 59 -119 2088 118 91 109 chr20 40646145 40646585 -31507297 + MSTB1 LTR MaLR 1 432 0 449 234 26 71 chr20 40646585 40646706 -31507176 + MER5B DNA MER1_type 59 173 -5 181 208 38 19 chr20 40646977 40647030 -31506852 + L2 LINE L2 3168 3221 -92 2704 107 89 0 chr20 40647041 40647434 -31506448 - MSTC LTR MaLR 0 428 1 333 0 0 0 chr20 40647779 40647816 -31506066 + (CA)n Simple_repeat Simple_repeat 1 37 0 288 0 0 0 chr20 40647815 40647847 -31506035 + (TC)n Simple_repeat Simple_repeat 2 33 0 * 420 277 75 6 chr20 40648037 40648203 -31505679 - MIR SINE MIR -62 146 13 274 275 92 38 chr20 40648679 40648810 -31505072 + MIR SINE MIR 106 243 -19 444 223 11 0 chr20 40650951 40651045 -31502837 + MER81 DNA DNA 19 113 -1 218 330 0 0 chr20 40654278 40654369 -31499513 + (TG)n Simple_repeat Simple_repeat 1 91 0 192 77 0 0 chr20 40654386 40654412 -31499470 + (TG)n Simple_repeat Simple_repeat 2 27 0 193 366 28 0 chr20 40656118 40656189 -31497693 + L2 LINE L2 3180 3252 -61 1963 146 0 13 chr20 40656594 40656761 -31497121 - AluJb SINE Alu -14 298 135 2286 89 0 0 chr20 40656761 40657063 -31496819 - AluSx SINE Alu -10 302 1 1963 146 0 13 chr20 40657063 40657197 -31496685 - AluJb SINE Alu -177 135 1 1869 141 16 13 chr20 40659451 40659755 -31494127 + AluJb SINE Alu 1 305 -7 224 305 11 0 chr20 40660192 40660287 -31493595 + (CA)n Simple_repeat Simple_repeat 1 96 0 254 219 0 16 chr20 40662356 40662420 -31491462 + (CAT)n Simple_repeat Simple_repeat 1 63 0 688 156 17 17 chr20 40662446 40662625 -31491257 + C-rich Low_complexity Low_complexity 2 180 0 216 143 0 0 chr20 40662629 40662671 -31491211 + (CCCCCA)n Simple_repeat Simple_repeat 4 45 0 206 300 20 27 chr20 40663168 40663318 -31490564 + (CCCTG)n Simple_repeat Simple_repeat 3 151 0 1366 248 54 23 chr20 40664329 40664808 -31489074 - MLT1F1 LTR MaLR 0 567 74 1926 126 3 17 chr20 40664822 40665124 -31488758 - AluJb SINE Alu -1 311 14 232 272 14 79 chr20 40666080 40666215 -31487667 - MIR SINE MIR -62 146 48 1172 233 45 19 chr20 40666526 40666886 -31486996 + MLT1A1 LTR MaLR 2 365 0 389 316 52 26 chr20 40670470 40670625 -31483257 + MER5A DNA MER1_type 17 175 -14 702 169 0 39 chr20 40671040 40671272 -31482610 + (ATGGTG)n Simple_repeat Simple_repeat 1 223 0 298 164 0 0 chr20 40723468 40723523 -31430359 - Alu SINE Alu -247 56 2 1979 155 0 3 chr20 40723558 40723862 -31430020 - AluJb SINE Alu -9 303 1 493 177 0 54 chr20 40723862 40723961 -31429921 - L1 LINE L1 -2155 3991 3899 2383 74 0 0 chr20 40723961 40724258 -31429624 + AluY SINE Alu 1 297 -14 493 177 0 54 chr20 40724258 40724288 -31429594 - L1 LINE L1 -2247 3899 3869 276 357 92 25 chr20 40724631 40724869 -31429013 - MIR SINE MIR -3 259 6 2041 101 7 26 chr20 40725412 40725719 -31428163 + AluSp SINE Alu 1 301 -12 424 252 126 0 chr20 40725720 40725847 -31428035 - L1MDa LINE L1 -3461 3079 2937 381 230 25 37 chr20 40725847 40726045 -31427837 - L1MDa LINE L1 -3921 2619 2452 26 0 0 0 chr20 40726077 40726103 -31427779 + AT_rich Low_complexity Low_complexity 1 26 0 890 169 25 12 chr20 40726105 40726265 -31427617 - FRAM SINE Alu 0 166 5 735 253 12 0 chr20 40728360 40728522 -31425360 - FRAM SINE Alu -2 164 1 2346 65 0 0 chr20 40728533 40728825 -31425057 - AluY SINE Alu -16 295 4 235 83 21 21 chr20 40729062 40729110 -31424772 + (CTG)n Simple_repeat Simple_repeat 3 50 0 1175 154 48 0 chr20 40730490 40730678 -31423204 - AluJb SINE Alu -115 197 1 2153 83 17 3 chr20 40730718 40731007 -31422875 + AluSp SINE Alu 1 293 -20 534 143 102 0 chr20 40731098 40731196 -31422686 + AluJb SINE Alu 32 139 -173 1215 186 9 101 chr20 40731200 40731353 -31422529 + AluJo SINE Alu 9 120 -192 2327 104 0 0 chr20 40731353 40731662 -31422220 + AluSg SINE Alu 1 309 -1 1215 186 9 101 chr20 40731662 40731825 -31422057 + AluJo SINE Alu 120 296 -16 2420 174 48 0 chr20 40731825 40731910 -31421972 + L1 LINE L1 4553 4632 -1514 2159 116 30 0 chr20 40731910 40732212 -31421670 + AluSx SINE Alu 1 311 -1 2420 174 48 0 chr20 40732212 40732671 -31421211 + L1 LINE L1 4632 5123 -1023 423 111 83 0 chr20 40732699 40732771 -31421111 + AluS SINE Alu 223 300 -10 332 272 109 27 chr20 40732775 40732895 -31420987 - L1ME4a LINE L1 -31 6090 5954 1795 90 0 0 chr20 40732895 40733129 -31420753 - AluSg SINE Alu -76 234 1 332 272 109 27 chr20 40733129 40733155 -31420727 - L1ME4a LINE L1 -167 5954 5932 1023 146 18 0 chr20 40733167 40733331 -31420551 + AluSg/x SINE Alu 134 300 -12 1424 86 0 5 chr20 40733574 40733760 -31420122 - AluSg SINE Alu -125 185 1 293 0 27 0 chr20 40734840 40734877 -31419005 + (TG)n Simple_repeat Simple_repeat 1 38 0 1769 150 3 7 chr20 40734889 40735175 -31418707 - AluJo SINE Alu -27 285 1 597 208 131 0 chr20 40735175 40735358 -31418524 + MLT1D LTR MaLR 29 235 -270 291 211 33 22 chr20 40735444 40735534 -31418348 + MLT1D LTR MaLR 284 374 -16 2244 96 0 0 chr20 40737524 40737839 -31416043 + AluSx SINE Alu 6 320 0 2279 108 0 0 chr20 40737844 40738150 -31415732 + AluSc SINE Alu 1 306 -3 1778 111 42 45 chr20 40738154 40738384 -31415498 + AluSx SINE Alu 3 233 -79 2712 183 68 47 chr20 40738384 40738792 -31415090 - LTR27 LTR ERV1 -3 633 206 2087 113 3 3 chr20 40738792 40739083 -31414799 + AluSg SINE Alu 1 291 -19 2712 183 68 47 chr20 40739083 40739293 -31414589 - LTR27 LTR ERV1 -430 206 2 1778 111 42 45 chr20 40739293 40739351 -31414531 + AluSx SINE Alu 233 290 -22 458 231 133 5 chr20 40739357 40739408 -31414474 - L1M4 LINE L1 -2565 3581 3538 2308 72 10 3 chr20 40739408 40739713 -31414169 - AluY SINE Alu -4 307 1 458 231 133 5 chr20 40739713 40739856 -31414026 - L1M4 LINE L1 -2608 3538 3362 508 101 45 0 chr20 40739956 40740045 -31413837 + L1 LINE L1 4209 4301 -1845 1244 162 5 5 chr20 40740050 40740260 -31413622 + AluSx SINE Alu 3 212 -100 435 66 0 49 chr20 40740260 40740321 -31413561 + AluSq/x SINE Alu 78 135 -177 1981 96 7 20 chr20 40740321 40740613 -31413269 + AluY SINE Alu 2 289 -22 21 0 0 0 chr20 40740613 40740634 -31413248 + AT_rich Low_complexity Low_complexity 1 21 0 1335 193 60 4 chr20 40740643 40740932 -31412950 + AluJo SINE Alu 3 306 0 297 386 21 14 chr20 40741049 40741189 -31412693 + MIR SINE MIR 17 157 -105 269 262 182 37 chr20 40741186 40741373 -31412509 - MIR SINE MIR -1 261 48 * 2093 95 3 7 chr20 40741589 40741885 -31411997 - AluSg SINE Alu -15 295 1 836 190 51 19 chr20 40742478 40742636 -31411246 + FRAM SINE Alu 1 163 -3 986 95 0 22 chr20 40742636 40742773 -31411109 + AluSq/x SINE Alu 1 134 -179 1297 68 0 6 chr20 40742774 40742937 -31410945 + U1 snRNA snRNA 1 162 -3 1226 220 70 4 chr20 40742968 40743241 -31410641 + AluSx SINE Alu 2 292 -10 2259 62 7 14 chr20 40743246 40743537 -31410345 + AluY SINE Alu 1 289 -22 21 0 0 0 chr20 40743537 40743558 -31410324 + AT_rich Low_complexity Low_complexity 1 21 0 1335 193 60 4 chr20 40743567 40743856 -31410026 + AluJo SINE Alu 3 306 0 898 165 14 78 chr20 40744159 40744255 -31409627 + L1 LINE L1 3692 3793 -2353 2172 92 0 38 chr20 40744255 40744570 -31409312 + AluSx SINE Alu 1 303 -9 898 165 14 78 chr20 40744570 40744691 -31409191 + L1 LINE L1 3793 3895 -2251 2164 70 23 23 chr20 40744691 40744992 -31408890 - AluSx SINE Alu -11 301 1 2291 61 37 0 chr20 40746243 40746540 -31407342 - AluY SINE Alu -3 308 1 868 104 16 0 chr20 40747081 40747206 -31406676 - FRAM SINE Alu -13 163 37 2195 104 0 25 chr20 40747238 40747556 -31406326 + AluSg SINE Alu 1 310 0 1837 224 19 34 chr20 40747556 40747755 -31406127 + L1MB3 LINE L1 5658 5858 -325 2098 113 0 16 chr20 40747755 40747892 -31405990 + AluSx SINE Alu 1 139 -173 2046 110 0 4 chr20 40747892 40748173 -31405709 + AluSc SINE Alu 17 296 -13 2098 113 0 16 chr20 40748173 40748345 -31405537 + AluSx SINE Alu 139 305 -7 1837 224 19 34 chr20 40748345 40748677 -31405205 + L1MB3 LINE L1 5858 6181 -2 1624 156 21 21 chr20 40748689 40748971 -31404911 - AluJo SINE Alu -15 297 16 1362 185 0 20 chr20 40749016 40749265 -31404617 + AluJb SINE Alu 1 244 -68 1623 95 9 0 chr20 40749265 40749487 -31404395 - AluSg/x SINE Alu -1 309 86 35 0 0 0 chr20 40749639 40749674 -31404208 + AT_rich Low_complexity Low_complexity 1 35 0 2063 118 0 7 chr20 40749674 40749962 -31403920 + AluSx SINE Alu 1 286 -26 432 181 0 0 chr20 40750004 40750087 -31403795 + GA-rich Low_complexity Low_complexity 2 84 0 1788 149 38 0 chr20 40750845 40751133 -31402749 - AluJb SINE Alu -13 299 1 2505 61 3 3 chr20 40751173 40751486 -31402396 + AluSp SINE Alu 1 313 0 2069 142 3 0 chr20 40751581 40751892 -31401990 + AluSx SINE Alu 1 312 0 345 47 0 0 chr20 40752361 40752404 -31401478 + (CA)n Simple_repeat Simple_repeat 2 44 0 2234 100 0 0 chr20 40752404 40752695 -31401187 - AluSg SINE Alu -19 291 1 1006 152 18 0 chr20 40752733 40752897 -31400985 + AluSg/x SINE Alu 132 298 -12 808 170 109 14 chr20 40753060 40753074 -31400808 + AluSg/x SINE Alu 118 129 -181 2111 129 16 0 chr20 40753074 40753377 -31400505 + AluSq SINE Alu 1 308 -5 808 170 109 14 chr20 40753377 40753509 -31400373 + AluSg/x SINE Alu 129 278 -32 270 0 0 0 chr20 40753510 40753540 -31400342 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 2300 85 7 0 chr20 40753828 40754121 -31399761 - AluSc SINE Alu -14 295 1 1692 175 20 13 chr20 40754186 40754489 -31399393 - AluJo SINE Alu -7 305 1 1450 169 54 51 chr20 40754545 40754677 -31399205 + AluJo SINE Alu 1 131 -181 2203 94 0 35 chr20 40754677 40754995 -31398887 + AluSg SINE Alu 1 307 -3 1450 169 54 51 chr20 40754995 40755158 -31398724 + AluJo SINE Alu 131 297 -15 295 211 0 0 chr20 40755246 40755298 -31398584 + AluJ/monomer SINE Alu 1 52 -250 715 184 112 11 chr20 40755298 40755477 -31398405 + MSTA LTR MaLR 2 198 -230 1596 126 0 0 chr20 40755478 40755692 -31398190 + AluSx SINE Alu 1 214 -98 25 0 0 0 chr20 40755694 40755719 -31398163 + AT_rich Low_complexity Low_complexity 1 25 0 358 248 148 34 chr20 40755790 40755819 -31398063 + L1ME4a LINE L1 5925 5949 -172 1794 86 4 0 chr20 40755819 40756052 -31397830 + AluSg SINE Alu 1 234 -76 358 248 148 34 chr20 40756052 40756171 -31397711 + L1ME4a LINE L1 5949 6090 -31 423 111 83 0 chr20 40756175 40756247 -31397635 - AluS SINE Alu -10 301 224 4257 159 189 111 chr20 40756275 40756734 -31397148 - L1 LINE L1 -1023 5123 4701 2180 113 30 0 chr20 40756734 40757036 -31396846 - AluSx SINE Alu -1 311 1 4257 159 189 111 chr20 40757036 40757121 -31396761 - L1 LINE L1 -1445 4701 4624 2148 99 0 20 chr20 40757121 40757284 -31396598 - AluSx SINE Alu -16 296 140 2154 139 0 0 chr20 40757284 40757593 -31396289 - AluSx SINE Alu -2 310 2 2148 99 0 20 chr20 40757593 40757731 -31396151 - AluSx SINE Alu -172 140 1 944 113 0 8 chr20 40757731 40757864 -31396018 - AluSq/x SINE Alu -178 134 3 4257 159 189 111 chr20 40757864 40758143 -31395739 - L1 LINE L1 -1522 4624 4368 1498 155 117 8 chr20 40758143 40758407 -31395475 - AluSg1 SINE Alu -16 293 1 4257 159 189 111 chr20 40758407 40758442 -31395440 - L1 LINE L1 -1778 4368 4337 1979 155 0 3 chr20 40758442 40758746 -31395136 - AluJb SINE Alu -9 303 1 4257 159 189 111 chr20 40758746 40758845 -31395037 - L1 LINE L1 -1809 4337 4247 2422 70 0 0 chr20 40758845 40759145 -31394737 + AluY SINE Alu 1 300 -11 4257 159 189 111 chr20 40759145 40759266 -31394616 - L1 LINE L1 -1899 4247 4137 2157 95 0 38 chr20 40759266 40759581 -31394301 - AluSx SINE Alu -9 303 1 4257 159 189 111 chr20 40759581 40760000 -31393882 - L1 LINE L1 -2009 4137 3360 1576 178 53 0 chr20 40760270 40760551 -31393331 - AluJo SINE Alu -16 296 1 226 244 80 28 chr20 40760837 40761196 -31392686 + L1MD2 LINE L1 6194 6533 -1449 2150 107 0 3 chr20 40761196 40761494 -31392388 - AluY SINE Alu -14 297 1 226 244 80 28 chr20 40761494 40761509 -31392373 + L1MD2 LINE L1 6533 7976 -6 2154 106 7 0 chr20 40761680 40761982 -31391900 + AluSp SINE Alu 1 304 -9 226 326 190 15 chr20 40762817 40763154 -31390728 + L2 LINE L2 2299 2694 -620 2137 99 3 0 chr20 40763163 40763467 -31390415 + AluSg SINE Alu 1 305 0 30 0 0 0 chr20 40763959 40763989 -31389893 + GC_rich Low_complexity Low_complexity 1 30 0 188 259 231 14 chr20 40764030 40764177 -31389705 - MIR SINE MIR -58 204 26 205 153 17 34 chr20 40766029 40766088 -31387794 + (CGGGG)n Simple_repeat Simple_repeat 4 61 0 24 53 0 0 chr20 40766193 40766231 -31387651 + GC_rich Low_complexity Low_complexity 1 38 0 345 320 28 65 chr20 40768760 40768842 -31385040 - L1MDa LINE L1 -5058 1482 1399 2138 120 7 0 chr20 40768842 40769151 -31384731 - AluSq SINE Alu 0 313 3 345 320 28 65 chr20 40769151 40769315 -31384567 - L1MDa LINE L1 -5141 1399 1245 278 270 22 0 chr20 40769319 40769408 -31384474 + CT-rich Low_complexity Low_complexity 1 91 0 2116 101 0 0 chr20 40769432 40769738 -31384144 - AluSx SINE Alu 0 311 6 580 229 109 45 chr20 40771726 40772104 -31381778 - MLT1D LTR MaLR -16 451 29 1789 154 3 3 chr20 40772104 40772389 -31381493 + AluJo SINE Alu 1 285 -27 293 0 27 0 chr20 40772401 40772438 -31381444 + (CA)n Simple_repeat Simple_repeat 1 38 0 2212 88 10 3 chr20 40773510 40773807 -31380075 + AluSg SINE Alu 1 299 -11 2438 59 0 3 chr20 40773919 40774222 -31379660 + AluY SINE Alu 1 302 -9 1737 199 0 0 chr20 40774231 40774543 -31379339 + AluJo SINE Alu 1 312 0 350 196 0 0 chr20 40774543 40774599 -31379283 + G-rich Low_complexity Low_complexity 3 58 0 741 116 11 44 chr20 40774601 40774782 -31379100 + (GGAA)n Simple_repeat Simple_repeat 4 178 0 811 115 6 38 chr20 40774796 40774979 -31378903 + (GGAA)n Simple_repeat Simple_repeat 2 178 0 189 0 0 0 chr20 40774979 40775000 -31378882 + (CAGG)n Simple_repeat Simple_repeat 1 21 0 266 50 25 0 chr20 40775633 40775673 -31378209 + (CCCCCG)n Simple_repeat Simple_repeat 3 43 0 24 77 0 0 chr20 40775770 40775822 -31378060 + GC_rich Low_complexity Low_complexity 1 52 0 210 37 0 0 chr20 40775822 40775849 -31378033 + (CCCGG)n Simple_repeat Simple_repeat 4 30 0 204 281 17 45 chr20 40775980 40776158 -31377724 + C-rich Low_complexity Low_complexity 2 174 0 232 229 100 0 chr20 40786879 40786949 -31366933 - MIR SINE MIR -64 144 68 252 0 0 0 chr20 40787837 40787865 -31366017 + (GGGGA)n Simple_repeat Simple_repeat 4 31 0 2011 81 27 30 chr20 40790418 40790716 -31363166 - AluSx SINE Alu -15 297 1 2165 84 47 3 chr20 40791967 40792265 -31361617 - AluSq SINE Alu -2 311 1 2198 88 3 0 chr20 40792276 40792587 -31361295 - AluSp SINE Alu 0 312 1 934 78 31 0 chr20 40792589 40792717 -31361165 - AluSp SINE Alu -181 132 1 21 0 0 0 chr20 40795240 40795261 -31358621 + AT_rich Low_complexity Low_complexity 1 21 0 603 189 49 0 chr20 40795266 40795388 -31358494 - FLAM_C SINE Alu -15 128 1 373 224 6 49 chr20 40796954 40797190 -31356692 + C-rich Low_complexity Low_complexity 1 225 0 2075 104 10 20 chr20 40798740 40799037 -31354845 - AluSx SINE Alu -18 294 1 326 179 0 15 chr20 40802328 40802395 -31351487 - MIR SINE MIR -116 146 81 321 210 0 92 chr20 40803451 40803646 -31350236 + (CCCTG)n Simple_repeat Simple_repeat 3 179 0 333 202 0 93 chr20 40803674 40803867 -31350015 + (CCCTG)n Simple_repeat Simple_repeat 4 178 0 205 321 8 30 chr20 40803933 40804067 -31349815 + C-rich Low_complexity Low_complexity 5 135 0 26 30 0 0 chr20 40807163 40807196 -31346686 + GC_rich Low_complexity Low_complexity 1 33 0 1867 96 75 7 chr20 40807522 40807804 -31346078 + AluSg SINE Alu 1 301 -9 1989 101 28 3 chr20 40808174 40808460 -31345422 + AluSx SINE Alu 1 293 -19 2366 55 0 29 chr20 40808462 40808774 -31345108 + AluY SINE Alu 1 303 -8 2097 97 0 20 chr20 40808971 40809271 -31344611 - AluSc SINE Alu -15 294 1 1339 184 64 11 chr20 40809333 40809616 -31344266 - AluJb SINE Alu -14 298 1 235 83 21 21 chr20 40814904 40814952 -31338930 + (CAG)n Simple_repeat Simple_repeat 3 50 0 2346 65 0 0 chr20 40815189 40815481 -31338401 + AluY SINE Alu 4 295 -16 735 253 12 0 chr20 40815492 40815654 -31338228 + FRAM SINE Alu 1 164 -2 890 169 25 12 chr20 40817723 40817883 -31335999 + FRAM SINE Alu 5 166 0 26 0 0 0 chr20 40817885 40817911 -31335971 + AT_rich Low_complexity Low_complexity 1 26 0 381 230 25 37 chr20 40817943 40818141 -31335741 + L1MEc LINE L1 2452 2619 -3921 433 245 75 41 chr20 40818141 40818269 -31335613 + L1MEc LINE L1 2937 3072 -3468 1999 92 0 85 chr20 40818269 40818597 -31335285 - AluSp SINE Alu -12 301 2 433 245 75 41 chr20 40818597 40818615 -31335267 + L1MEc LINE L1 3072 3088 -3452 414 300 143 7 chr20 40818647 40818920 -31334962 + L1MEc LINE L1 3038 3347 -3193 491 287 58 37 chr20 40818927 40819348 -31334534 + MLT2B1 LTR ERVL 3 520 0 509 229 160 14 chr20 40819355 40819499 -31334383 + L1MEc LINE L1 3442 3606 -2934 648 237 142 0 chr20 40819504 40819705 -31334177 + L1MEc LINE L1 3687 3933 -2607 2374 74 0 3 chr20 40819705 40820017 -31333865 + AluY SINE Alu 1 311 0 648 237 142 0 chr20 40820017 40820068 -31333814 + L1MEc LINE L1 3933 3975 -2565 1505 130 61 36 chr20 40820074 40820128 -31333754 - AluSx SINE Alu -26 286 235 2712 183 68 47 chr20 40820128 40820338 -31333544 + LTR27 LTR ERV1 2 206 -430 2087 113 3 3 chr20 40820338 40820629 -31333253 - AluSg SINE Alu -19 291 1 2712 183 68 47 chr20 40820629 40821037 -31332845 + LTR27 LTR ERV1 206 633 -3 1505 130 61 36 chr20 40821037 40821259 -31332623 - AluSx SINE Alu -77 235 3 897 222 6 0 chr20 40821277 40821453 -31332429 + FRAM SINE Alu 1 171 -5 784 242 59 26 chr20 40821489 40821828 -31332054 + L1MEc LINE L1 4884 5233 -1307 362 276 49 32 chr20 40821831 40821954 -31331928 + L1MEc LINE L1 5598 5722 -818 1315 209 55 0 chr20 40822122 40822376 -31331506 - AluJo SINE Alu -44 268 1 1541 186 51 0 chr20 40822379 40822654 -31331228 - AluJo SINE Alu -18 294 6 2227 114 0 3 chr20 40822669 40822975 -31330907 - AluSx SINE Alu -7 305 1 229 241 0 0 chr20 40822976 40823034 -31330848 + L1MEc LINE L1 1754 1811 -4585 1503 167 17 31 chr20 40823040 40823328 -31330554 - AluJb SINE Alu -7 305 22 2033 99 3 20 chr20 40823350 40823643 -31330239 - AluSx SINE Alu -14 298 11 2026 140 0 0 chr20 40823754 40824047 -31329835 + AluSx SINE Alu 1 293 -19 2366 67 0 0 chr20 40824225 40824523 -31329359 - AluY SINE Alu -13 298 1 2006 121 4 0 chr20 40824574 40824884 -31328998 + AluSp SINE Alu 1 311 0 1801 122 4 11 chr20 40824889 40825167 -31328715 + AluSx SINE Alu 37 312 0 308 303 15 76 chr20 40826489 40826621 -31327261 - L2 LINE L2 -3 3269 3146 2321 61 7 3 chr20 40826939 40827236 -31326646 + AluY SINE Alu 1 298 -13 421 320 39 23 chr20 40827404 40827469 -31326413 - L1ME3A LINE L1 -218 5952 5889 747 172 16 8 chr20 40827469 40827597 -31326285 - FLAM_A SINE Alu -4 129 1 421 320 39 23 chr20 40827597 40827790 -31326092 - L1ME3A LINE L1 -281 5889 5690 2018 108 0 4 chr20 40828001 40828280 -31325602 + AluSx SINE Alu 26 303 -9 1707 184 10 0 chr20 40828280 40828574 -31325308 + AluSx SINE Alu 1 297 -15 4241 63 54 1 chr20 40828604 40829586 -31324296 + MER11A LTR ERVK 1 1266 0 1886 134 0 47 chr20 40829587 40829885 -31323997 + AluSx SINE Alu 3 286 -26 371 226 119 19 chr20 40829885 40830044 -31323838 + MER5C DNA MER1_type 149 323 -1 334 362 35 0 chr20 40830287 40830403 -31323479 - L1ME3A LINE L1 -875 5271 5152 236 200 0 0 chr20 40830405 40830460 -31323422 - L1MB2 LINE L1 0 6171 6117 2180 107 0 3 chr20 40830917 40831216 -31322666 + AluSx SINE Alu 1 298 -14 2162 94 0 10 chr20 40831216 40831514 -31322368 + AluY SINE Alu 1 295 -16 2013 114 16 22 chr20 40831954 40832269 -31321613 + AluSq SINE Alu 1 313 0 1196 146 0 0 chr20 40832269 40832447 -31321435 + AluSg/x SINE Alu 132 309 -1 2094 85 3 29 chr20 40832927 40833233 -31320649 + AluSc SINE Alu 1 298 -11 1975 160 0 0 chr20 40833506 40833812 -31320070 - AluSx SINE Alu -6 306 1 1749 179 7 20 chr20 40833855 40834156 -31319726 + AluJb SINE Alu 1 297 -15 2214 94 7 0 chr20 40834864 40835161 -31318721 + AluSg SINE Alu 1 299 -11 2281 72 3 0 chr20 40835279 40835570 -31318312 - AluY SINE Alu -19 292 1 1917 100 89 0 chr20 40836128 40836300 -31317582 - AluSx SINE Alu -6 306 98 2034 58 4 18 chr20 40836300 40836577 -31317305 - AluY SINE Alu 0 311 39 1917 100 89 0 chr20 40836577 40836685 -31317197 - AluSx SINE Alu -214 98 1 1286 74 0 6 chr20 40836715 40836878 -31317004 - U1 snRNA snRNA -3 162 1 986 95 0 22 chr20 40836879 40837016 -31316866 - AluSq/x SINE Alu -179 134 1 836 190 51 19 chr20 40837016 40837174 -31316708 - FRAM SINE Alu -3 163 1 2063 98 3 7 chr20 40837767 40838063 -31315819 + AluSg SINE Alu 1 295 -15 269 262 182 37 chr20 40838279 40838466 -31315416 + MIR SINE MIR 48 261 -1 * 297 386 21 14 chr20 40838463 40838603 -31315279 - MIR SINE MIR -105 157 17 1334 193 60 4 chr20 40838720 40839009 -31314873 - AluJo SINE Alu 0 306 3 21 0 0 0 chr20 40839018 40839039 -31314843 + AT_rich Low_complexity Low_complexity 1 21 0 2259 62 7 14 chr20 40839039 40839330 -31314552 - AluY SINE Alu -22 289 1 1923 133 14 14 chr20 40839335 40839628 -31314254 - AluSq SINE Alu -20 293 1 1123 102 32 43 chr20 40839783 40839801 -31314081 + AluSp SINE Alu 118 135 -178 2288 78 14 3 chr20 40839801 40840096 -31313786 + AluSx SINE Alu 1 298 -14 1123 102 32 43 chr20 40840096 40840264 -31313618 + AluSp SINE Alu 135 302 -11 529 196 75 0 chr20 40840305 40840412 -31313470 + AluJb SINE Alu 182 296 -16 2106 135 0 3 chr20 40840419 40840730 -31313152 + AluSx SINE Alu 3 312 0 2282 84 3 3 chr20 40840730 40841038 -31312844 + AluSq SINE Alu 1 309 -4 1298 167 0 46 chr20 40841789 40842029 -31311853 - AluJb SINE Alu -83 229 1 747 211 0 0 chr20 40842032 40842165 -31311717 - AluJo/FLAM SINE Alu -169 133 1 21 0 0 0 chr20 40842172 40842193 -31311689 + AT_rich Low_complexity Low_complexity 1 21 0 2090 98 14 3 chr20 40842226 40842512 -31311370 + AluSc SINE Alu 1 289 -20 1122 202 65 16 chr20 40842601 40842848 -31311034 + AluJo SINE Alu 32 290 -22 2397 69 0 7 chr20 40842856 40843162 -31310720 + AluY SINE Alu 1 304 -7 2338 84 3 10 chr20 40843165 40843476 -31310406 + AluSp SINE Alu 1 309 -4 2341 54 0 20 chr20 40843479 40843777 -31310105 + AluY SINE Alu 1 292 -19 2064 130 0 0 chr20 40844572 40844864 -31309018 + AluSx SINE Alu 5 296 -16 1861 152 7 3 chr20 40845229 40845532 -31308350 - AluJb SINE Alu -3 309 6 243 154 0 0 chr20 40845605 40845644 -31308238 + Alu SINE Alu 55 93 -209 2103 136 0 0 chr20 40845644 40845952 -31307930 + AluSx SINE Alu 1 308 -4 2178 110 0 0 chr20 40845954 40846255 -31307627 + AluY SINE Alu 3 303 -8 2181 90 3 3 chr20 40846972 40847271 -31306611 - AluSc SINE Alu -10 299 1 230 329 66 0 chr20 40847703 40847779 -31306103 + MIR SINE MIR 19 99 -109 1095 138 0 11 chr20 40848242 40848416 -31305466 - AluSg/x SINE Alu -7 305 134 2308 87 3 0 chr20 40848416 40848716 -31305166 - AluSq SINE Alu -8 305 5 266 211 0 0 chr20 40848983 40849035 -31304847 - L2 LINE L2 -1 3271 3220 239 282 39 29 chr20 40849198 40849301 -31304581 - L2 LINE L2 -354 2960 2857 189 0 0 0 chr20 40850270 40850291 -31303591 + (CCCGG)n Simple_repeat Simple_repeat 5 25 0 31 92 0 0 chr20 40850316 40850403 -31303479 + GC_rich Low_complexity Low_complexity 1 87 0 273 155 43 26 chr20 40850426 40850542 -31303340 + (CCCG)n Simple_repeat Simple_repeat 3 120 0 288 176 0 0 chr20 40850617 40850685 -31303197 + (CGG)n Simple_repeat Simple_repeat 2 69 0 306 289 37 45 chr20 40851904 40852108 -31301774 + L1MD1 LINE L1 5595 5799 -371 1400 142 61 64 chr20 40852112 40852408 -31301474 + AluJb SINE Alu 13 307 -5 2229 108 0 3 chr20 40852551 40852856 -31301026 + AluSx SINE Alu 3 306 -6 268 281 177 0 chr20 40852900 40852996 -31300886 - MIR SINE MIR -31 231 119 197 331 77 39 chr20 40853105 40853235 -31300647 + L2 LINE L2 3137 3271 -1 1882 179 0 3 chr20 40853534 40853847 -31300035 - AluJb SINE Alu 0 312 1 568 200 38 0 chr20 40853852 40853957 -31299925 - FLAM_A SINE Alu -18 124 16 217 299 60 88 chr20 40853999 40854250 -31299632 + L2 LINE L2 2958 3201 -71 1133 258 33 58 chr20 40856087 40856514 -31297368 + L1MD1 LINE L1 5797 6212 -30 2215 85 17 0 chr20 40858890 40859184 -31294698 + AluSc SINE Alu 1 299 -10 2313 25 42 3 chr20 40859184 40859467 -31294415 + AluY SINE Alu 1 294 -17 345 24 0 0 chr20 40861973 40862015 -31291867 + (CAGG)n Simple_repeat Simple_repeat 2 43 0 182 271 129 0 chr20 40862345 40862415 -31291467 - MIR SINE MIR -179 83 5 2114 113 7 0 chr20 40864451 40864753 -31289129 - AluSx SINE Alu -8 304 1 2340 76 0 3 chr20 40864923 40865224 -31288658 - AluY SINE Alu -11 300 1 194 303 91 10 chr20 40866823 40866922 -31286960 - MIR SINE MIR -37 225 119 304 220 77 0 chr20 40867163 40867254 -31286628 + MLT1K LTR MaLR 118 215 -373 226 200 0 18 chr20 40867328 40867383 -31286499 + MLT1K LTR MaLR 518 571 -17 1070 75 0 0 chr20 40868374 40868508 -31285374 + AluY SINE Alu 1 134 -177 2311 87 0 0 chr20 40868508 40868817 -31285065 + AluY SINE Alu 1 309 -2 210 37 0 0 chr20 40870653 40870680 -31283202 + (TA)n Simple_repeat Simple_repeat 1 27 0 2089 115 0 7 chr20 40870680 40870975 -31282907 - AluSx SINE Alu -19 293 1 1834 177 6 3 chr20 40871158 40871469 -31282413 + AluJo SINE Alu 1 312 0 1970 107 0 7 chr20 40871483 40871575 -31282307 + AluSg SINE Alu 31 122 -188 261 0 0 0 chr20 40871575 40871604 -31282278 + (CA)n Simple_repeat Simple_repeat 2 30 0 1970 107 0 7 chr20 40871604 40871792 -31282090 + AluSg SINE Alu 122 309 -1 2277 94 10 0 chr20 40872316 40872625 -31281257 - AluSp SINE Alu -1 312 1 2242 84 0 34 chr20 40872820 40873142 -31280740 + AluY SINE Alu 1 311 0 2200 115 7 0 chr20 40873155 40873459 -31280423 + AluSx SINE Alu 1 306 -6 195 42 0 0 chr20 40873769 40873793 -31280089 + (A)n Simple_repeat Simple_repeat 1 24 0 2152 102 10 0 chr20 40873899 40874194 -31279688 + AluSq SINE Alu 1 298 -15 2079 94 0 4 chr20 40874203 40874479 -31279403 + AluSx SINE Alu 21 295 -17 2002 156 0 0 chr20 40874490 40874792 -31279090 + AluSx SINE Alu 1 302 -10 2213 108 0 0 chr20 40874817 40875114 -31278768 + AluSg SINE Alu 1 297 -13 1484 61 20 5 chr20 40875114 40875312 -31278570 + AluY SINE Alu 106 306 -5 1748 157 20 27 chr20 40875690 40875990 -31277892 - AluJb SINE Alu -14 298 1 2034 99 18 0 chr20 40876884 40877167 -31276715 - AluSx SINE Alu -20 292 5 1552 86 9 5 chr20 40877621 40877831 -31276051 + AluSx SINE Alu 2 212 -100 949 60 0 0 chr20 40877895 40878012 -31275870 + AluSq/x SINE Alu 1 117 -196 246 105 0 0 chr20 40878030 40878068 -31275814 + (A)n Simple_repeat Simple_repeat 1 38 0 1889 147 3 3 chr20 40878250 40878550 -31275332 - AluSx SINE Alu -12 300 1 1074 118 5 59 chr20 40878565 40878580 -31275302 + AluJo SINE Alu 120 134 -178 2168 104 3 3 chr20 40878580 40878888 -31274994 + AluSp SINE Alu 1 308 -5 1074 118 5 59 chr20 40878888 40879075 -31274807 + AluJo SINE Alu 134 311 -1 2284 81 7 3 chr20 40879075 40879383 -31274499 + AluY SINE Alu 1 309 -2 2423 78 0 0 chr20 40879431 40879740 -31274142 + AluSc SINE Alu 1 309 0 2189 97 0 10 chr20 40881041 40881352 -31272530 - AluSq SINE Alu 0 313 6 346 254 92 31 chr20 40881549 40881679 -31272203 - MIR SINE MIR -116 146 9 181 358 67 8 chr20 40882376 40882510 -31271372 + L2 LINE L2 2957 3098 -174 39 22 0 0 chr20 40882758 40882804 -31271078 + GC_rich Low_complexity Low_complexity 1 46 0 825 142 0 30 chr20 40884587 40884721 -31269161 - FLAM_C SINE Alu -3 130 1 251 174 0 0 chr20 40884725 40884771 -31269111 - Alu SINE Alu -256 46 1 641 134 74 144 chr20 40885569 40885718 -31268164 - MER53 DNA DNA -1 188 55 2128 105 0 10 chr20 40885718 40886034 -31267848 - AluSq SINE Alu 0 313 1 641 134 74 144 chr20 40886034 40886086 -31267796 - MER53 DNA DNA -134 55 1 657 202 0 0 chr20 40888169 40888283 -31265599 + FRAM SINE Alu 1 114 -62 2509 58 0 0 chr20 40888937 40889247 -31264635 - AluY SINE Alu -1 310 1 195 42 0 0 chr20 40890332 40890356 -31263526 + (GGGGA)n Simple_repeat Simple_repeat 3 26 0 214 261 0 0 chr20 40890927 40890973 -31262909 + GA-rich Low_complexity Low_complexity 1 46 0 202 218 18 18 chr20 40891560 40891615 -31262267 + (CCCCAG)n Simple_repeat Simple_repeat 4 58 0 2228 100 0 0 chr20 40892453 40892764 -31261118 - AluSx SINE Alu -1 311 1 1076 128 6 0 chr20 40892773 40892937 -31260945 - AluSx SINE Alu -3 309 145 517 154 0 0 chr20 40892937 40893015 -31260867 - AluSx SINE Alu -234 78 1 1467 190 75 4 chr20 40893018 40893297 -31260585 - AluSx SINE Alu -3 299 1 2286 78 0 13 chr20 40893571 40893745 -31260137 - AluSc SINE Alu -4 305 135 2280 108 0 0 chr20 40893745 40894051 -31259831 - AluSg SINE Alu -4 306 1 2286 78 0 13 chr20 40894051 40894185 -31259697 - AluSc SINE Alu -174 135 1 230 392 63 0 chr20 40895088 40895231 -31258651 - L2 LINE L2 0 3313 3162 2511 40 0 0 chr20 40895234 40895536 -31258346 + AluY SINE Alu 1 302 -9 578 285 128 8 chr20 40895557 40896046 -31257836 + L1ME1 LINE L1 5619 6162 -4 2490 58 0 0 chr20 40896065 40896375 -31257507 - AluY SINE Alu 0 311 2 2196 81 7 16 chr20 40896636 40896943 -31256939 - AluSx SINE Alu -8 304 1 680 172 0 4 chr20 40898444 40898937 -31254945 + (TG)n Simple_repeat Simple_repeat 1 491 0 2331 83 3 0 chr20 40899747 40900048 -31253834 - AluSg SINE Alu -8 302 1 2308 60 3 7 chr20 40900060 40900358 -31253524 - AluY SINE Alu -14 297 1 664 327 95 22 chr20 40900410 40900903 -31252979 - L1ME3A LINE L1 -16 6154 5626 1677 134 69 0 chr20 40902644 40902906 -31250976 - AluJb SINE Alu -14 298 19 2129 122 0 0 chr20 40903697 40903985 -31249897 + AluSx SINE Alu 1 288 -24 2371 74 0 0 chr20 40903987 40904306 -31249576 + AluY SINE Alu 1 319 0 2265 111 0 0 chr20 40904311 40904617 -31249265 + AluSc SINE Alu 1 306 -3 1985 101 25 11 chr20 40904621 40904929 -31248953 + AluSq SINE Alu 3 314 0 2188 88 10 3 chr20 40905560 40905856 -31248026 - AluY SINE Alu -13 298 1 912 108 8 0 chr20 40906513 40906643 -31247239 + AluSq/x SINE Alu 5 135 -178 2021 94 0 0 chr20 40906643 40906908 -31246974 + AluSg SINE Alu 1 265 -45 1152 254 66 45 chr20 40907039 40907237 -31246645 - L1MD3 LINE L1 -179 7816 7624 2103 116 0 28 chr20 40907237 40907555 -31246327 + AluSx SINE Alu 3 311 -1 1152 254 66 45 chr20 40907555 40907981 -31245901 - L1MD3 LINE L1 -371 7624 6941 346 82 49 76 chr20 40909337 40909521 -31244361 + (CCCTG)n Simple_repeat Simple_repeat 2 180 0 411 72 33 87 chr20 40909556 40910000 -31243882 + (CCCTG)n Simple_repeat Simple_repeat 1 419 0 2524 50 0 0 chr20 40912280 40912581 -31241301 - AluY SINE Alu -10 301 1 26 64 0 0 chr20 40914262 40914309 -31239573 + GC_rich Low_complexity Low_complexity 1 47 0 328 138 31 0 chr20 40914445 40914510 -31239372 - AluS SINE Alu -233 67 1 209 114 29 0 chr20 40914578 40914613 -31239269 + A-rich Low_complexity Low_complexity 2 37 0 2493 74 0 0 chr20 40914618 40914927 -31238955 + AluSc SINE Alu 1 309 0 1243 229 39 110 chr20 40914936 40915083 -31238799 + L1M4 LINE L1 4758 4914 -1232 1708 163 32 0 chr20 40915083 40915366 -31238516 + AluJb SINE Alu 2 293 -19 1243 229 39 110 chr20 40915366 40915837 -31238045 + L1M4 LINE L1 4914 5332 -814 2198 116 0 0 chr20 40915837 40916147 -31237735 + AluSg SINE Alu 1 310 0 330 333 69 14 chr20 40916924 40916939 -31236943 - HAL1 LINE L1 -2339 168 155 1695 197 3 10 chr20 40916939 40917249 -31236633 - AluJo SINE Alu -4 308 1 330 333 69 14 chr20 40917249 40917377 -31236505 - HAL1 LINE L1 -2352 155 17 754 158 86 40 chr20 40917500 40917652 -31236230 + AluJb SINE Alu 153 311 -1 516 328 10 5 chr20 40917661 40917853 -31236029 - LTR16A LTR ERVL -90 360 168 1169 259 27 16 chr20 40917967 40918334 -31235548 + MER20B DNA MER1_type 408 778 -5 643 313 100 23 chr20 40918830 40919196 -31234686 + L2 LINE L2 2586 3010 -303 3633 122 17 15 chr20 40919196 40919722 -31234160 - MER1A DNA MER1_type 0 527 1 643 313 100 23 chr20 40919722 40919894 -31233988 + L2 LINE L2 3010 3167 -146 1128 170 0 0 chr20 40919898 40920080 -31233802 - AluSg/x SINE Alu -9 303 122 2001 122 7 0 chr20 40920415 40920709 -31233173 + AluSx SINE Alu 3 298 -14 1019 252 133 36 chr20 40920874 40921287 -31232595 - L2 LINE L2 -179 3134 2654 1933 145 3 3 chr20 40921287 40921576 -31232306 + AluJb SINE Alu 4 292 -20 1019 252 133 36 chr20 40921576 40921651 -31232231 - L2 LINE L2 -659 2654 2588 270 0 0 0 chr20 40921936 40921966 -31231916 + (A)n Simple_repeat Simple_repeat 1 30 0 332 265 189 10 chr20 40923246 40923442 -31230440 - L2 LINE L2 0 3313 3083 1974 123 0 46 chr20 40923975 40924091 -31229791 - AluSq SINE Alu -2 311 191 2404 60 3 0 chr20 40924091 40924391 -31229491 - AluY SINE Alu -10 301 1 1974 123 0 46 chr20 40924391 40924600 -31229282 - AluSq SINE Alu -122 191 1 1124 261 164 3 chr20 40924865 40925255 -31228627 + LTR16B LTR ERVL 1 453 -11 839 261 20 0 chr20 40925269 40925468 -31228414 - MER63A DNA MER1_type -7 203 1 300 227 23 80 chr20 40925468 40925556 -31228326 + L1ME LINE L1 5642 5724 -438 1311 104 24 9 chr20 40925661 40925873 -31228009 - AluY SINE Alu -58 253 39 8094 101 14 19 chr20 40925873 40927759 -31226123 - L1PA8A LINE L1 -302 5829 3958 259 122 0 0 chr20 40927860 40927901 -31225981 - AluY SINE Alu -262 41 1 1169 231 74 0 chr20 40928175 40928487 -31225395 + MER65A LTR ERV1 110 444 -1 330 269 35 58 chr20 40928489 40928621 -31225261 - L1MC4a LINE L1 -1087 6721 6592 1617 112 51 83 chr20 40928621 40928934 -31224948 + AluSg1 SINE Alu 1 303 -6 330 269 35 58 chr20 40928934 40928972 -31224910 - L1MC4a LINE L1 -1216 6592 6555 318 345 79 0 chr20 40929510 40929649 -31224233 + HAL1 LINE L1 1114 1263 -1244 1993 96 0 38 chr20 40929649 40929971 -31223911 + AluSx SINE Alu 1 311 0 353 355 103 34 chr20 40930066 40930251 -31223631 - MIR SINE MIR 0 262 56 2512 51 0 13 chr20 40930251 40930566 -31223316 + AluY SINE Alu 1 311 0 353 355 103 34 chr20 40930566 40930614 -31223268 - MIR SINE MIR -206 56 13 2278 81 0 0 chr20 40931303 40931598 -31222284 + AluSg SINE Alu 1 295 -15 910 238 80 37 chr20 40932029 40932353 -31221529 - MLT1B LTR MaLR -49 341 4 2121 98 0 53 chr20 40933296 40933614 -31220268 - AluSx SINE Alu -11 301 1 268 281 16 31 chr20 40934574 40934702 -31219180 + C-rich Low_complexity Low_complexity 6 131 0 450 366 73 0 chr20 40934919 40935110 -31218772 - MIR SINE MIR -36 226 22 262 317 57 24 chr20 40936119 40936242 -31217640 - MER5A DNA MER1_type -37 152 26 337 266 30 18 chr20 40938406 40938575 -31215307 + (CCCTG)n Simple_repeat Simple_repeat 5 175 0 352 275 67 18 chr20 40939587 40939749 -31214133 + MIR SINE MIR 21 184 -71 295 339 26 0 chr20 40940762 40940877 -31213005 + MIR SINE MIR 30 147 -61 204 157 0 59 chr20 40941446 40941548 -31212334 + (TG)n Simple_repeat Simple_repeat 1 96 0 220 336 88 16 chr20 40946252 40946377 -31207505 + MIR SINE MIR 90 223 -39 238 230 16 75 chr20 40948218 40948405 -31205477 + C-rich Low_complexity Low_complexity 2 177 0 808 182 96 20 chr20 40951592 40951790 -31202092 + MER52A LTR ERV1 1 213 -1542 * 4686 181 85 54 chr20 40951777 40953110 -31200772 + MER52A LTR ERV1 382 1755 0 2063 129 3 3 chr20 40955171 40955474 -31198408 - AluSx SINE Alu -9 303 1 194 200 0 114 chr20 40955895 40955965 -31197917 + L2 LINE L2 417 478 -2836 207 69 0 0 chr20 40956399 40956428 -31197454 + (CCCCAA)n Simple_repeat Simple_repeat 1 29 0 1101 286 122 46 chr20 40956952 40957379 -31196503 + L1MEc LINE L1 460 853 -5543 2082 120 3 3 chr20 40957379 40957678 -31196204 + AluSq SINE Alu 1 299 -14 1101 286 122 46 chr20 40957678 40958347 -31195535 + L1MEc LINE L1 853 1640 -4756 1206 250 46 2 chr20 40959187 40959679 -31194203 + L1MCc LINE L1 1146 1666 -4887 527 292 5 0 chr20 40959719 40960151 -31193731 + (CA)n Simple_repeat Simple_repeat 1 434 0 559 234 0 10 chr20 40960199 40960518 -31193364 + (CA)n Simple_repeat Simple_repeat 1 315 0 750 263 191 67 chr20 40960541 40960731 -31193151 + L1MCc LINE L1 1779 1944 -5129 2169 104 7 0 chr20 40960731 40961028 -31192854 + AluSx SINE Alu 3 301 -11 750 263 191 67 chr20 40961028 40961560 -31192322 + L1MCc LINE L1 1944 2684 -4389 1379 271 17 22 chr20 40961572 40962146 -31191736 + L1MCc LINE L1 2869 3392 -3549 1438 123 32 0 chr20 40962146 40962366 -31191516 + AluSg/x SINE Alu 86 312 0 2265 233 85 17 chr20 40962368 40963021 -31190861 + L1MCc LINE L1 3380 4116 -2825 1981 128 7 0 chr20 40963021 40963311 -31190571 + AluSx SINE Alu 1 292 -20 2265 233 85 17 chr20 40963311 40963585 -31190297 + L1MCc LINE L1 4116 4370 -2571 704 298 176 18 chr20 40963668 40964174 -31189708 - MLT1G1 LTR MaLR -9 586 1 725 134 7 34 chr20 40964784 40964933 -31188949 - MER83 LTR ERV1 -9 439 295 1946 144 6 0 chr20 40965027 40965353 -31188529 - MER83 LTR ERV1 -120 328 1 1678 221 68 94 chr20 40969120 40969845 -31184037 - L1MB3 LINE L1 0 6183 5478 257 75 25 0 chr20 40970648 40970688 -31183194 + (TGAA)n Simple_repeat Simple_repeat 1 41 0 472 223 16 43 chr20 40975676 40975860 -31178022 + (TG)n Simple_repeat Simple_repeat 1 179 0 374 346 17 11 chr20 40975871 40976050 -31177832 + (TG)n Simple_repeat Simple_repeat 1 180 0 193 260 26 39 chr20 40976386 40976463 -31177419 + L2 LINE L2 3137 3212 -60 22 0 0 0 chr20 40979413 40979435 -31174447 + GC_rich Low_complexity Low_complexity 1 22 0 372 329 7 7 chr20 40981469 40981609 -31172273 + (TG)n Simple_repeat Simple_repeat 2 141 0 203 398 23 0 chr20 40983481 40983569 -31170313 - MIR SINE MIR -92 170 81 233 309 10 21 chr20 40985317 40985414 -31168468 + (CA)n Simple_repeat Simple_repeat 2 97 0 183 80 0 0 chr20 40985449 40985474 -31168408 + (CA)n Simple_repeat Simple_repeat 2 26 0 777 217 39 10 chr20 40986850 40987053 -31166829 + L1MB5 LINE L1 5966 6174 0 198 71 0 0 chr20 40987421 40987449 -31166433 + (CAGA)n Simple_repeat Simple_repeat 4 31 0 203 158 0 26 chr20 40994855 40994893 -31158989 + GA-rich Low_complexity Low_complexity 2 38 0 457 205 39 133 chr20 40997159 40997393 -31156489 - MLT1C LTR MaLR -203 264 53 1916 244 51 114 chr20 40997426 40997555 -31156327 - MLT1C-int LTR MaLR -5 1730 1594 2300 93 0 0 chr20 40997555 40997855 -31156027 + AluSx SINE Alu 1 300 -12 1916 244 51 114 chr20 40997855 40998985 -31154897 - MLT1C-int LTR MaLR -141 1594 91 295 256 128 35 chr20 40998983 40999055 -31154827 - MLT1-int LTR MaLR -35 1336 1272 * 2155 119 0 3 chr20 40999055 40999367 -31154515 + AluSx SINE Alu 1 311 -1 295 256 128 35 chr20 40999367 40999466 -31154416 - MLT1-int LTR MaLR -99 1272 1149 738 255 106 19 chr20 40999548 40999870 -31154012 - MLT1C LTR MaLR 0 467 118 216 250 18 0 chr20 41001268 41001324 -31152558 + (CACCC)n Simple_repeat Simple_repeat 3 59 0 1331 62 11 0 chr20 41003599 41003775 -31150107 + AluY SINE Alu 125 302 -9 456 198 260 17 chr20 41003775 41003952 -31149930 - LTR10A LTR ERV1 -389 220 1 1733 167 0 45 chr20 41003978 41004290 -31149592 + AluSx SINE Alu 3 300 -12 3139 184 69 95 chr20 41004558 41004997 -31148885 + MER31-int LTR ERV1 3611 4060 -876 2399 70 3 0 chr20 41004997 41005296 -31148586 + AluY SINE Alu 1 300 -11 3139 184 69 95 chr20 41005296 41005341 -31148541 + MER31-int LTR ERV1 4060 4105 -831 1533 188 3 7 chr20 41005341 41005623 -31148259 + AluJo SINE Alu 22 302 -10 3139 184 69 95 chr20 41005623 41005794 -31148088 + MER31-int LTR ERV1 4105 4279 -657 2316 98 0 0 chr20 41005794 41006100 -31147782 + AluSx SINE Alu 1 306 -6 2419 85 0 0 chr20 41006106 41006412 -31147470 + AluSp SINE Alu 1 306 -7 3139 184 69 95 chr20 41006412 41006727 -31147155 + MER31-int LTR ERV1 4284 4565 -371 1719 141 54 24 chr20 41006731 41007029 -31146853 + AluJo SINE Alu 1 307 -5 2157 238 32 59 chr20 41007030 41007779 -31146103 - LTR49-int LTR ERV1 -1394 3542 2814 2388 69 0 22 chr20 41007783 41008101 -31145781 - AluY SINE Alu 0 311 1 422 184 82 61 chr20 41008102 41008249 -31145633 - LTR49-int LTR ERV1 -4795 1536 1387 253 233 0 17 chr20 41008287 41008347 -31145535 - LTR49-int LTR ERV1 -5697 634 576 2638 30 0 0 chr20 41010527 41010829 -31143053 + AluY SINE Alu 1 302 -9 207 0 0 0 chr20 41010829 41010852 -31143030 + (TA)n Simple_repeat Simple_repeat 1 23 0 1237 114 0 0 chr20 41010852 41011019 -31142863 + AluSg/x SINE Alu 131 297 -13 666 136 7 22 chr20 41011549 41011831 -31142051 + (TG)n Simple_repeat Simple_repeat 1 277 0 186 43 0 0 chr20 41012438 41012461 -31141421 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 2096 96 0 4 chr20 41012466 41012746 -31141136 - AluSg SINE Alu -31 279 1 381 329 7 7 chr20 41014758 41014910 -31138972 + (CACG)n Simple_repeat Simple_repeat 4 155 0 457 205 39 133 chr20 41016370 41016604 -31137278 - MLT1C LTR MaLR -203 264 53 1901 245 51 115 chr20 41016637 41016766 -31137116 - MLT1C-int LTR MaLR -5 1730 1594 2300 93 0 0 chr20 41016766 41017066 -31136816 + AluSx SINE Alu 1 300 -12 1901 245 51 115 chr20 41017066 41018198 -31135684 - MLT1C-int LTR MaLR -141 1594 91 295 256 128 35 chr20 41018196 41018268 -31135614 - MLT1-int LTR MaLR -35 1336 1272 * 2155 119 0 3 chr20 41018268 41018580 -31135302 + AluSx SINE Alu 1 311 -1 295 256 128 35 chr20 41018580 41018679 -31135203 - MLT1-int LTR MaLR -99 1272 1149 693 258 106 19 chr20 41018761 41019083 -31134799 - MLT1C LTR MaLR 0 467 118 216 250 18 0 chr20 41020481 41020537 -31133345 + (CACCC)n Simple_repeat Simple_repeat 3 59 0 1624 284 68 22 chr20 41025780 41026411 -31127471 - L1MB5 LINE L1 -15 6159 5500 1585 174 49 0 chr20 41026447 41026735 -31127147 + AluJb SINE Alu 1 302 -10 600 132 9 0 chr20 41026750 41026856 -31127026 + Tigger1 DNA MER2_type 1739 1845 -573 2779 167 20 48 chr20 41027322 41027577 -31126305 + Tigger1 DNA MER2_type 1832 2093 -325 2459 54 0 0 chr20 41027577 41027874 -31126008 + AluY SINE Alu 1 297 -14 2779 167 20 48 chr20 41027874 41028103 -31125779 + Tigger1 DNA MER2_type 2093 2298 -120 2315 86 0 7 chr20 41028103 41028406 -31125476 - AluSx SINE Alu -11 301 1 2779 167 20 48 chr20 41028406 41028524 -31125358 + Tigger1 DNA MER2_type 2298 2418 0 378 254 43 25 chr20 41028842 41028996 -31124886 - MLT1D LTR MaLR -197 270 110 2375 68 0 0 chr20 41029139 41029435 -31124447 - AluSg SINE Alu -14 296 1 207 0 0 0 chr20 41030488 41030511 -31123371 + (CCCTG)n Simple_repeat Simple_repeat 1 23 0 1369 37 0 0 chr20 41032289 41032473 -31121409 - AluY SINE Alu 0 305 122 1188 120 0 0 chr20 41033719 41033837 -31120045 + (CCA)n Simple_repeat Simple_repeat 1 478 0 1188 120 0 0 chr20 41033837 41034197 -31119685 + (CCA)n Simple_repeat Simple_repeat 1 360 0 1016 137 0 11 chr20 41034208 41034390 -31119492 + (CCA)n Simple_repeat Simple_repeat 1 180 0 1125 132 0 4 chr20 41034467 41034795 -31119087 + (CCA)n Simple_repeat Simple_repeat 1 506 0 1832 138 3 7 chr20 41038759 41039071 -31114811 - AluSx SINE Alu 0 311 1 698 276 98 40 chr20 41040127 41040475 -31113407 + MLT1K LTR MaLR 206 573 -15 263 231 51 51 chr20 41041248 41041365 -31112517 + C-rich Low_complexity Low_complexity 4 120 0 493 194 14 156 chr20 41042039 41042166 -31111716 + LTR62 LTR ERVK 1 88 -631 1936 134 23 13 chr20 41042166 41042473 -31111409 + AluSx SINE Alu 1 310 -2 493 194 14 156 chr20 41042473 41042556 -31111326 + LTR62 LTR ERVK 88 181 -538 856 222 153 11 chr20 41042603 41042878 -31111004 + LTR62 LTR ERVK 376 689 -30 918 241 40 0 chr20 41043628 41043881 -31110001 - MLT2C2 LTR ERVL -184 280 18 213 286 73 68 chr20 41044941 41045189 -31108693 - L2 LINE L2 -176 3096 2848 194 216 3 0 chr20 41045964 41046013 -31107869 - MIR SINE MIR -63 145 101 309 286 84 11 chr20 41049683 41049861 -31104021 + L2 LINE L2 2874 3064 -249 377 295 91 53 chr20 41050444 41050542 -31103340 + L1MB5 LINE L1 5844 5937 -237 1593 169 26 0 chr20 41050542 41050844 -31103038 + AluJo SINE Alu 1 310 -2 377 295 91 53 chr20 41050844 41051064 -31102818 + L1MB5 LINE L1 5937 6174 0 222 315 31 39 chr20 41051814 41051944 -31101938 - L3 LINE CR1 -42 1535 1407 288 0 0 0 chr20 41054363 41054395 -31099487 + (TG)n Simple_repeat Simple_repeat 1 32 0 802 164 7 14 chr20 41054450 41054590 -31099292 + FRAM SINE Alu 28 166 -10 197 299 78 0 chr20 41060167 41060244 -31093638 + MIR SINE MIR 51 133 -129 24 0 0 0 chr20 41063576 41063600 -31090282 + GC_rich Low_complexity Low_complexity 1 24 0 34 55 0 0 chr20 41063811 41063866 -31090016 + GC_rich Low_complexity Low_complexity 1 55 0 34 55 0 0 chr20 41063955 41064010 -31089872 + GC_rich Low_complexity Low_complexity 1 55 0 821 111 17 28 chr20 41064054 41064235 -31089647 + (GGGGA)n Simple_repeat Simple_repeat 2 180 0 304 147 37 37 chr20 41064238 41064347 -31089535 + G-rich Low_complexity Low_complexity 1 109 0 1668 174 17 0 chr20 41067257 41067556 -31086326 + AluJo SINE Alu 1 304 -8 1214 145 0 0 chr20 41067556 41067735 -31086147 + AluJo/FRAM SINE Alu 134 312 0 21 0 0 0 chr20 41067738 41067759 -31086123 + AT_rich Low_complexity Low_complexity 1 21 0 2270 104 0 0 chr20 41067769 41068067 -31085815 + AluSq SINE Alu 1 298 -15 2068 129 6 0 chr20 41068069 41068380 -31085502 + AluSp SINE Alu 1 313 0 1198 220 34 18 chr20 41070706 41071033 -31082849 + MLT1A1 LTR MaLR 21 352 -13 655 238 37 37 chr20 41071673 41071887 -31081995 + MER20 DNA MER1_type 1 214 -5 2193 89 10 3 chr20 41071898 41072191 -31081691 + AluSg SINE Alu 1 295 -15 2132 126 3 0 chr20 41072232 41072542 -31081340 + AluSq SINE Alu 1 311 -2 235 333 83 0 chr20 41072807 41072927 -31080955 + MIR SINE MIR 28 157 -105 2196 52 28 0 chr20 41074880 41075170 -31078712 + AluY SINE Alu 1 298 -13 430 225 139 20 chr20 41075849 41076000 -31077882 + Charlie1 DNA MER1_type 4 172 -2589 478 255 101 0 chr20 41077145 41077294 -31076588 - MER53 DNA DNA 0 189 26 698 278 153 11 chr20 41077577 41077930 -31075952 + MLT1D LTR MaLR 23 425 -80 27 62 0 0 chr20 41079491 41079539 -31074343 + GC_rich Low_complexity Low_complexity 1 48 0 265 173 19 77 chr20 41080795 41080810 -31073072 + MER69 DNA AcHobo 2221 2235 -291 2298 93 0 0 chr20 41080810 41081110 -31072772 + AluSx SINE Alu 1 300 -12 265 173 19 77 chr20 41081110 41081198 -31072684 + MER69 DNA AcHobo 2235 2318 -208 2446 60 3 3 chr20 41081372 41081674 -31072208 - AluSc SINE Alu -7 302 1 990 177 0 11 chr20 41082906 41083260 -31070622 + (TGGA)n Simple_repeat Simple_repeat 2 351 0 966 149 0 12 chr20 41083277 41084009 -31069873 + (TGGA)n Simple_repeat Simple_repeat 1 722 0 807 165 0 0 chr20 41084033 41084209 -31069673 + (TGGA)n Simple_repeat Simple_repeat 1 176 0 349 290 44 2 chr20 41086525 41086668 -31067214 + MIR SINE MIR 8 136 -72 48 81 0 0 chr20 41090117 41090228 -31063654 + GC_rich Low_complexity Low_complexity 1 111 0 22 35 0 0 chr20 41090274 41090303 -31063579 + GC_rich Low_complexity Low_complexity 1 29 0 339 193 16 86 chr20 41090441 41090628 -31063254 + G-rich Low_complexity Low_complexity 6 179 0 812 208 235 4 chr20 41092456 41092720 -31061162 + MSTD LTR MaLR 21 345 -51 252 79 0 0 chr20 41092775 41092813 -31061069 + MSTD LTR MaLR 406 443 -14 262 197 16 0 chr20 41093032 41093093 -31060789 - MIR SINE MIR -131 131 70 687 255 7 19 chr20 41095242 41095498 -31058384 - L1ME3A LINE L1 -200 5970 5660 1995 157 0 0 chr20 41095651 41095956 -31057926 - AluJb SINE Alu -7 305 1 243 243 0 14 chr20 41095957 41096027 -31057855 - LTR41 LTR ERVL -701 72 4 265 298 12 0 chr20 41096028 41096112 -31057770 - L1MCc LINE L1 -5045 1378 1294 984 264 99 15 chr20 41096551 41097025 -31056857 + MLT1E3 LTR MaLR 43 617 -7 526 270 195 0 chr20 41097488 41097729 -31056153 - L1MC4 LINE L1 -460 7582 7295 1971 116 3 14 chr20 41097729 41098022 -31055860 + AluSx SINE Alu 1 290 -22 2268 133 23 76 chr20 41098049 41098217 -31055665 - MER41E LTR ERV1 0 512 337 531 165 174 17 chr20 41098217 41098332 -31055550 + FLAM_A SINE Alu 1 133 0 2268 133 23 76 chr20 41098332 41098650 -31055232 - MER41E LTR ERV1 -175 337 52 242 265 77 29 chr20 41098654 41098824 -31055058 + (CAGTC)n Simple_repeat Simple_repeat 3 180 0 * 282 297 58 0 chr20 41098789 41098977 -31054905 + (CTCGG)n Simple_repeat Simple_repeat 1 198 0 295 210 25 0 chr20 41098977 41099058 -31054824 - MER41E LTR ERV1 -429 83 1 277 258 72 0 chr20 41099138 41099235 -31054647 - L1MC4 LINE L1 -762 7280 7177 235 310 65 39 chr20 41099275 41099430 -31054452 - L1ME1 LINE L1 -18 6148 5990 1012 304 86 33 chr20 41099498 41100036 -31053846 - L1ME1 LINE L1 -278 5888 5319 2267 80 3 19 chr20 41100036 41100347 -31053535 - AluSq SINE Alu -3 310 5 3424 191 59 60 chr20 41100361 41100805 -31053077 - L1MB7 LINE L1 0 6184 5741 2350 79 0 0 chr20 41100805 41101095 -31052787 - AluSx SINE Alu -22 290 1 3424 191 59 60 chr20 41101095 41101470 -31052412 - L1MB7 LINE L1 -443 5741 5367 1967 118 7 7 chr20 41101470 41101767 -31052115 - AluSg SINE Alu -13 297 1 3424 191 59 60 chr20 41101767 41102235 -31051647 - L1MB7 LINE L1 -817 5367 4895 1740 156 32 0 chr20 41102237 41102520 -31051362 - AluJb SINE Alu -19 293 2 330 26 0 0 chr20 41102680 41102719 -31051163 + (TC)n Simple_repeat Simple_repeat 1 39 0 294 50 0 0 chr20 41102718 41102758 -31051124 + (CA)n Simple_repeat Simple_repeat 1 40 0 * 1926 118 25 0 chr20 41103147 41103462 -31050420 + AluSx SINE Alu 1 322 0 336 233 12 0 chr20 41103470 41103556 -31050326 + L1MB5 LINE L1 4884 4970 -1176 3244 191 72 15 chr20 41103876 41103913 -31049969 + L1MB5 LINE L1 5022 5055 -1119 1676 185 0 7 chr20 41103913 41104215 -31049667 + AluJb SINE Alu 1 300 -12 3244 191 72 15 chr20 41104215 41105169 -31048713 + L1MB5 LINE L1 5055 6165 -9 2256 93 0 0 chr20 41105205 41105495 -31048387 - AluSx SINE Alu -22 290 1 459 298 45 25 chr20 41105504 41105775 -31048107 - L1MB7 LINE L1 -1446 4700 4436 2103 113 144 46 chr20 41105775 41106060 -31047822 - MSTA LTR MaLR 0 428 93 2256 85 0 31 chr20 41106060 41106379 -31047503 + AluSg SINE Alu 1 309 -1 2103 113 144 46 chr20 41106379 41106483 -31047399 - MSTA LTR MaLR -335 93 1 459 298 45 25 chr20 41106483 41106698 -31047184 - L1MB7 LINE L1 -1710 4436 4227 1825 134 12 38 chr20 41106698 41107018 -31046864 - AluSx SINE Alu 0 312 1 459 298 45 25 chr20 41107018 41107211 -31046671 - L1MB7 LINE L1 -1919 4227 3918 1189 114 5 27 chr20 41107316 41107500 -31046382 - AluSp SINE Alu 0 313 134 2145 118 16 0 chr20 41107500 41107804 -31046078 - AluSx SINE Alu -2 310 2 2482 57 0 10 chr20 41107866 41108180 -31045702 - AluY SINE Alu 0 311 1 230 215 15 0 chr20 41108180 41108245 -31045637 - L1MDb LINE L1 -5401 1246 1181 847 168 21 0 chr20 41108255 41108398 -31045484 - FRAM SINE Alu -16 160 15 321 280 35 7 chr20 41108400 41108543 -31045339 - L1MDb LINE L1 -6382 160 14 202 291 87 39 chr20 41108580 41108683 -31045199 - L2 LINE L2 -5 3267 3160 279 358 109 0 chr20 41108740 41108877 -31045005 - MIR SINE MIR -2 260 109 22 56 0 0 chr20 41112204 41112240 -31041642 + GC_rich Low_complexity Low_complexity 1 36 0 22 0 0 0 chr20 41112404 41112426 -31041456 + GC_rich Low_complexity Low_complexity 1 22 0 2486 132 110 18 chr20 41115025 41115352 -31038530 - LTR10A LTR ERV1 -64 545 155 2395 63 0 7 chr20 41115352 41115655 -31038227 + AluY SINE Alu 1 301 -10 2486 132 110 18 chr20 41115655 41115826 -31038056 - LTR10A LTR ERV1 -454 155 1 1767 162 0 45 chr20 41115852 41116166 -31037716 + AluSx SINE Alu 3 302 -10 3110 184 69 95 chr20 41116434 41116873 -31037009 + MER31-int LTR ERV1 3611 4060 -876 2602 20 0 7 chr20 41116873 41117172 -31036710 + AluY SINE Alu 1 297 -14 3110 184 69 95 chr20 41117172 41117217 -31036665 + MER31-int LTR ERV1 4060 4105 -831 1520 191 3 7 chr20 41117217 41117499 -31036383 + AluJo SINE Alu 22 302 -10 3110 184 69 95 chr20 41117499 41117670 -31036212 + MER31-int LTR ERV1 4105 4279 -657 2311 98 0 0 chr20 41117670 41117975 -31035907 + AluSx SINE Alu 1 305 -7 2403 86 0 0 chr20 41117981 41118285 -31035597 + AluSp SINE Alu 1 304 -9 3110 184 69 95 chr20 41118285 41118600 -31035282 + MER31-int LTR ERV1 4284 4565 -371 1719 141 54 24 chr20 41118604 41118902 -31034980 + AluJo SINE Alu 1 307 -5 2159 236 31 57 chr20 41118903 41119652 -31034230 - LTR49-int LTR ERV1 -1394 3542 2814 2420 63 0 22 chr20 41119656 41119974 -31033908 - AluY SINE Alu 0 311 1 422 184 82 61 chr20 41119975 41120122 -31033760 - LTR49-int LTR ERV1 -4795 1536 1387 253 233 0 17 chr20 41120160 41120220 -31033662 - LTR49-int LTR ERV1 -5697 634 576 2670 33 0 0 chr20 41122404 41122711 -31031171 + AluY SINE Alu 1 307 -4 1279 128 5 0 chr20 41122711 41122898 -31030984 + AluSg/x SINE Alu 113 300 -12 789 145 3 15 chr20 41123390 41123721 -31030161 + (TG)n Simple_repeat Simple_repeat 1 327 0 2307 107 0 0 chr20 41124330 41124640 -31029242 - AluSg SINE Alu 0 310 1 381 329 7 7 chr20 41126655 41126807 -31027075 + (CACG)n Simple_repeat Simple_repeat 4 155 0 224 295 13 0 chr20 41127008 41127086 -31026796 + (CCCG)n Simple_repeat Simple_repeat 2 80 0 252 139 0 0 chr20 41134980 41135023 -31018859 + L2 LINE L2 3271 3313 0 870 184 16 3 chr20 41135025 41135348 -31018534 + (TGAA)n Simple_repeat Simple_repeat 1 327 0 221 216 0 78 chr20 41137786 41137888 -31015994 + (CCCCAG)n Simple_repeat Simple_repeat 6 99 0 192 125 0 0 chr20 41138317 41138349 -31015533 + (TGAA)n Simple_repeat Simple_repeat 1 32 0 586 217 78 28 chr20 41140445 41140625 -31013257 + L1M3 LINE L1 5571 5759 -424 1431 119 175 0 chr20 41140726 41140978 -31012904 - AluJo SINE Alu -6 306 11 778 124 7 58 chr20 41141695 41141832 -31012050 + AluJo/FLAM SINE Alu 1 130 -172 2037 118 3 10 chr20 41141832 41142129 -31011753 + AluSx SINE Alu 1 295 -17 380 179 42 53 chr20 41142132 41142227 -31011655 + MIR SINE MIR 47 140 -122 1082 225 105 6 chr20 41142604 41142946 -31010936 + L1MD1 LINE L1 5861 6236 -6 1974 100 3 50 chr20 41142946 41143120 -31010762 - AluSq SINE Alu 0 306 151 1695 51 56 0 chr20 41143120 41143334 -31010548 - AluY SINE Alu -11 300 75 1974 100 3 50 chr20 41143334 41143479 -31010403 - AluSq SINE Alu -155 151 1 1717 166 0 13 chr20 41143480 41143781 -31010101 - AluJb SINE Alu -15 297 1 444 242 16 31 chr20 41144117 41144245 -31009637 + FLAM_C SINE Alu 1 126 -7 23 0 0 0 chr20 41145459 41145482 -31008400 + GC_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr20 41145597 41145618 -31008264 + GC_rich Low_complexity Low_complexity 1 21 0 198 197 106 0 chr20 41148608 41148674 -31005208 + L2 LINE L2 3005 3077 -195 267 31 0 0 chr20 41149740 41149772 -31004110 + (GGGTG)n Simple_repeat Simple_repeat 4 35 0 2221 90 7 0 chr20 41149907 41150207 -31003675 - AluSx SINE Alu -9 303 2 263 379 0 11 chr20 41150795 41150969 -31002913 + (GGGTG)n Simple_repeat Simple_repeat 4 175 0 299 201 27 60 chr20 41151038 41151222 -31002660 + (TCGGG)n Simple_repeat Simple_repeat 1 178 0 251 242 65 0 chr20 41158208 41158270 -30995612 - MIR SINE MIR -80 182 117 275 318 47 9 chr20 41161248 41161355 -30992527 + MIR SINE MIR 37 147 -115 2106 105 3 35 chr20 41161455 41161768 -30992114 - AluSq SINE Alu -10 303 1 472 263 20 56 chr20 41161775 41161956 -30991926 - MIR SINE MIR -61 147 25 21 0 0 0 chr20 41164697 41164718 -30989164 + GC_rich Low_complexity Low_complexity 1 21 0 279 184 0 116 chr20 41166263 41166410 -30987472 + C-rich Low_complexity Low_complexity 2 131 0 222 37 0 0 chr20 41166504 41166531 -30987351 + (CCCCG)n Simple_repeat Simple_repeat 1 27 0 1146 137 0 0 chr20 41167148 41167323 -30986559 + AluSg/x SINE Alu 133 307 -5 314 167 0 0 chr20 41167329 41167383 -30986499 + MLT1G1 LTR MaLR 535 588 -7 1339 174 6 104 chr20 41167781 41168109 -30985773 - AluJb SINE Alu -16 296 1 2148 89 0 74 chr20 41168280 41168616 -30985266 + AluSx SINE Alu 1 311 -1 454 299 74 42 chr20 41169027 41169171 -30984711 + L1 LINE L1 5109 5247 -922 2319 56 24 3 chr20 41169171 41169458 -30984424 - AluY SINE Alu -18 293 1 454 299 74 42 chr20 41169458 41169623 -30984259 + L1 LINE L1 5247 5425 -744 808 181 0 0 chr20 41169913 41170051 -30983831 + FRAM SINE Alu 1 138 -38 272 237 35 53 chr20 41170722 41170836 -30983046 + L1MC4 LINE L1 7931 8042 0 2222 179 136 25 chr20 41171472 41172060 -30981822 + MER21B LTR ERV1 1 653 -210 371 286 149 7 chr20 41173099 41173253 -30980629 + MER21B LTR ERV1 677 852 -11 931 286 44 70 chr20 41173919 41174113 -30979769 + L1ME3A LINE L1 4886 5083 -1091 2366 73 6 19 chr20 41174113 41174428 -30979454 - AluY SINE Alu 0 311 1 931 286 44 70 chr20 41174428 41174607 -30979275 + L1ME3A LINE L1 5083 5265 -909 1857 158 10 0 chr20 41174607 41174911 -30978971 - AluJo SINE Alu 0 312 6 931 286 44 70 chr20 41174911 41175692 -30978190 + L1ME3A LINE L1 5265 6011 -163 2308 60 20 13 chr20 41175750 41176048 -30977834 + AluSx SINE Alu 1 300 -12 1928 124 7 10 chr20 41176050 41176348 -30977534 + AluSx SINE Alu 1 297 -15 717 200 54 25 chr20 41176349 41176571 -30977311 + L1MC/D LINE L1 5239 5466 -743 877 97 0 91 chr20 41176577 41176700 -30977182 + AluJo SINE Alu 1 109 -203 2323 71 0 3 chr20 41176700 41176997 -30976885 - AluY SINE Alu -15 296 1 877 97 0 91 chr20 41176997 41177027 -30976855 + AluJo SINE Alu 109 140 -172 2043 136 3 0 chr20 41177027 41177335 -30976547 + AluSx SINE Alu 1 309 -3 392 161 49 0 chr20 41177335 41177416 -30976466 + L1MC/D LINE L1 5465 5549 -784 237 200 46 0 chr20 41177540 41177605 -30976277 + L1MC/D LINE L1 5495 5562 -2223 259 154 19 0 chr20 41177618 41177670 -30976212 + L1MC/D LINE L1 5497 5549 -784 * 1574 179 19 6 chr20 41177656 41177969 -30975913 + L1MC/D LINE L1 5497 5813 -520 2302 92 0 0 chr20 41178779 41179073 -30974809 - AluSq SINE Alu -17 296 3 562 221 15 7 chr20 41179454 41179590 -30974292 + MLT1A1 LTR MaLR 228 364 -1 315 235 167 8 chr20 41179610 41179742 -30974140 - Charlie1 DNA MER1_type -2603 158 6 303 211 5 106 chr20 41183419 41183618 -30970264 + (CA)n Simple_repeat Simple_repeat 2 180 0 1957 126 10 3 chr20 41183727 41184020 -30969862 - AluSx SINE Alu -17 295 1 1983 107 7 0 chr20 41185997 41186278 -30967604 + AluSx SINE Alu 3 285 -27 2024 104 50 0 chr20 41187010 41187290 -30966592 - AluSx SINE Alu -18 294 1 2045 136 3 0 chr20 41188991 41189300 -30964582 + AluSx SINE Alu 1 310 -2 1750 182 6 10 chr20 41189408 41189721 -30964161 - AluJb SINE Alu 0 312 1 342 0 0 0 chr20 41190602 41190640 -30963242 + (CA)n Simple_repeat Simple_repeat 2 39 0 238 309 0 0 chr20 41191982 41192050 -30961832 - L1MC3 LINE L1 -12 7773 7706 1409 250 75 44 chr20 41192123 41192315 -30961567 - L1MC4 LINE L1 -159 7883 7699 2031 118 0 10 chr20 41192315 41192611 -30961271 - AluSx SINE Alu -19 293 1 1409 250 75 44 chr20 41192611 41192702 -30961180 - L1MC4 LINE L1 -343 7699 7612 2123 134 0 0 chr20 41192702 41193009 -30960873 + AluSx SINE Alu 1 307 -5 1409 250 75 44 chr20 41193009 41193320 -30960562 - L1MC4 LINE L1 -430 7612 7269 363 243 36 18 chr20 41193429 41193540 -30960342 - L1MC4 LINE L1 -980 7062 6950 302 237 53 9 chr20 41193633 41193747 -30960135 - L1MEd LINE L1 -5063 1056 938 855 123 0 43 chr20 41193805 41193943 -30959939 - FLAM_C SINE Alu -1 132 1 25 31 0 0 chr20 41193945 41193977 -30959905 + AT_rich Low_complexity Low_complexity 1 32 0 2069 65 0 48 chr20 41195741 41196031 -30957851 + AluSc SINE Alu 24 299 -10 2186 121 0 3 chr20 41196040 41196345 -30957537 + AluSx SINE Alu 1 304 -8 1809 141 7 46 chr20 41196353 41196658 -30957224 + AluJb SINE Alu 1 293 -19 1899 117 53 11 chr20 41197238 41197520 -30956362 + AluSx SINE Alu 1 294 -18 1955 134 40 0 chr20 41197520 41197818 -30956064 + AluSx SINE Alu 1 310 -2 2149 128 0 0 chr20 41197942 41198239 -30955643 + AluSx SINE Alu 1 297 -15 458 308 58 84 chr20 41198374 41198618 -30955264 + HAL1b LINE L1 1 250 -5896 2396 70 0 0 chr20 41198618 41198916 -30954966 - AluY SINE Alu -13 298 1 458 308 58 84 chr20 41198916 41199024 -30954858 + HAL1b LINE L1 250 5288 -858 2500 59 0 0 chr20 41202509 41202816 -30951066 + AluY SINE Alu 1 307 -4 236 268 21 52 chr20 41203055 41203152 -30950730 + MLT1H LTR MaLR 72 165 -384 278 225 99 49 chr20 41203260 41203402 -30950480 + MLT1H LTR MaLR 395 543 -6 2059 123 3 10 chr20 41203600 41203901 -30949981 + AluSx SINE Alu 1 299 -13 1523 159 0 114 chr20 41204005 41204338 -30949544 + AluJo SINE Alu 1 295 -7 24 32 0 0 chr20 41204422 41204453 -30949429 + AT_rich Low_complexity Low_complexity 1 31 0 242 250 102 98 chr20 41204955 41205219 -30948663 + MLT1H LTR MaLR 256 520 -29 1181 115 0 0 chr20 41205219 41205384 -30948498 - AluY SINE Alu 0 311 147 2199 96 27 0 chr20 41205780 41206081 -30947801 - AluSx SINE Alu -3 309 1 8000 46 31 23 chr20 41206337 41207043 -30946839 + LTR13 LTR ERVK 1 719 -288 194 0 39 0 chr20 41207043 41207069 -30946813 + (TC)n Simple_repeat Simple_repeat 2 28 0 8000 46 31 23 chr20 41207069 41207361 -30946521 + LTR13 LTR ERVK 719 1007 0 1921 158 3 7 chr20 41207591 41207895 -30945987 - AluJb SINE Alu -9 303 1 431 304 44 7 chr20 41208169 41208304 -30945578 + L1ME4a LINE L1 5944 6083 -38 22 70 0 0 chr20 41208340 41208383 -30945499 + AT_rich Low_complexity Low_complexity 1 43 0 2164 123 0 0 chr20 41208431 41208732 -30945150 + AluSq SINE Alu 1 301 -12 946 204 77 96 chr20 41209111 41209248 -30944634 + MLT1A2 LTR MaLR 19 157 -217 1771 162 10 14 chr20 41209248 41209545 -30944337 - AluJb SINE Alu -16 296 1 946 204 77 96 chr20 41209545 41209770 -30944112 + MLT1A2 LTR MaLR 157 374 0 1053 112 0 0 chr20 41212209 41212361 -30941521 - AluSx SINE Alu -4 308 157 809 103 0 0 chr20 41212361 41212468 -30941414 - AluSx SINE Alu -206 107 1 21 0 0 0 chr20 41212477 41212498 -30941384 + AT_rich Low_complexity Low_complexity 1 21 0 249 272 45 107 chr20 41212889 41213113 -30940769 + L1MDb LINE L1 747 956 -5453 388 293 86 9 chr20 41213221 41213337 -30940545 + L1MDb LINE L1 1099 1223 -5183 803 143 16 0 chr20 41213345 41213471 -30940411 + FRAM SINE Alu 25 152 -24 1191 164 13 55 chr20 41213475 41213663 -30940219 + L1MB4 LINE L1 5952 6129 -51 2296 79 33 3 chr20 41213663 41213967 -30939915 + AluSq SINE Alu 1 313 0 1191 164 13 55 chr20 41213967 41214016 -30939866 + L1MB4 LINE L1 6129 6179 -1 1881 149 6 16 chr20 41214113 41214428 -30939454 + AluJo SINE Alu 1 312 0 2173 106 0 3 chr20 41215786 41216078 -30937804 + AluSg SINE Alu 1 291 -19 2081 126 7 10 chr20 41216099 41216401 -30937481 + AluSx SINE Alu 1 301 -11 2182 92 0 49 chr20 41216404 41216731 -30937151 + AluSx SINE Alu 1 311 -1 2276 69 0 0 chr20 41216985 41217275 -30936607 - AluSg SINE Alu -20 290 1 2135 109 10 0 chr20 41217449 41217742 -30936140 - AluSx SINE Alu -16 296 1 2128 129 0 0 chr20 41217862 41218165 -30935717 - AluSg SINE Alu -7 303 1 22 0 0 0 chr20 41218972 41218994 -30934888 + GC_rich Low_complexity Low_complexity 1 22 0 282 194 28 37 chr20 41219013 41219121 -30934761 + C-rich Low_complexity Low_complexity 5 111 0 27 29 0 0 chr20 41219187 41219221 -30934661 + GC_rich Low_complexity Low_complexity 1 34 0 287 103 0 17 chr20 41219255 41219313 -30934569 + (CGG)n Simple_repeat Simple_repeat 1 57 0 28 0 0 0 chr20 41219335 41219363 -30934519 + GC_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr20 41219562 41219585 -30934297 + GC_rich Low_complexity Low_complexity 1 23 0 718 160 46 30 chr20 41220836 41220967 -30932915 + FLAM_C SINE Alu 1 133 0 266 191 32 0 chr20 41221290 41221353 -30932529 - MLT1D LTR MaLR -4 501 437 632 142 108 17 chr20 41221353 41221473 -30932409 + FLAM_C SINE Alu 1 131 -12 2352 64 0 0 chr20 41221480 41221775 -30932107 + AluY SINE Alu 6 300 -11 752 254 84 49 chr20 41221778 41222184 -30931698 - MLT1D LTR MaLR -61 444 25 1343 140 26 143 chr20 41222242 41222369 -30931513 - AluYb8 SINE Alu 0 308 168 195 69 0 0 chr20 41222369 41222398 -30931484 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1343 140 26 143 chr20 41222398 41222412 -30931470 - AluYb8 SINE Alu -140 168 154 2776 10 0 0 chr20 41222412 41222721 -30931161 + AluY SINE Alu 1 309 -2 1343 140 26 143 chr20 41222721 41222927 -30930955 - AluYb8 SINE Alu -154 154 1 2240 100 0 0 chr20 41222959 41223250 -30930632 - AluSg SINE Alu -19 291 1 1819 167 7 0 chr20 41223285 41223579 -30930303 + AluJo SINE Alu 1 296 -16 2003 122 10 7 chr20 41223582 41223878 -30930004 + AluSx SINE Alu 3 299 -13 468 223 10 0 chr20 41223883 41223986 -30929896 + LTR39 LTR ERV1 70 173 -610 2397 57 0 10 chr20 41223990 41224289 -30929593 + AluY SINE Alu 1 296 -15 1314 101 0 0 chr20 41224289 41224467 -30929415 + AluSg/x SINE Alu 132 309 -1 573 188 0 9 chr20 41224474 41224586 -30929296 + LTR39 LTR ERV1 172 282 -501 1791 160 3 0 chr20 41224609 41224897 -30928985 + AluSx SINE Alu 23 311 -1 1960 122 27 14 chr20 41224909 41225203 -30928679 + AluSx SINE Alu 1 298 -14 2184 127 0 0 chr20 41225520 41225827 -30928055 - AluSq SINE Alu -6 307 1 884 246 46 25 chr20 41226045 41226330 -30927552 + MER21B LTR ERV1 468 758 -105 2511 33 3 0 chr20 41226388 41226688 -30927194 + AluY SINE Alu 1 301 -10 450 241 18 65 chr20 41226694 41226864 -30927018 + Charlie1 DNA MER1_type 1884 2045 -716 2061 110 3 36 chr20 41226867 41227176 -30926706 - AluSx SINE Alu -13 299 1 1983 138 20 0 chr20 41227366 41227662 -30926220 - AluJo SINE Alu -10 302 1 286 194 16 16 chr20 41227663 41227725 -30926157 + MLT1C LTR MaLR 402 463 -4 777 136 40 13 chr20 41227990 41228180 -30925702 - MSTD LTR MaLR 0 396 169 362 132 15 29 chr20 41228210 41228278 -30925604 - MSTD LTR MaLR -329 67 1 2045 104 21 0 chr20 41228328 41228628 -30925254 + AluSq SINE Alu 1 306 0 1090 135 0 6 chr20 41228638 41228801 -30925081 + AluSq SINE Alu 137 298 -15 1730 119 23 99 chr20 41228801 41229145 -30924737 + AluYb8 SINE Alu 1 318 0 817 253 173 15 chr20 41229145 41229619 -30924263 + MLT1F LTR MaLR 17 538 -4 2437 66 0 0 chr20 41229961 41230263 -30923619 - AluY SINE Alu -9 302 1 2432 72 7 0 chr20 41230270 41230575 -30923307 - AluY SINE Alu -4 307 1 982 123 104 0 chr20 41230932 41231095 -30922787 - AluSp SINE Alu 0 313 134 2280 73 3 10 chr20 41231095 41231397 -30922485 - AluSx SINE Alu -12 300 1 213 169 11 90 chr20 41234037 41234126 -30919756 + C-rich Low_complexity Low_complexity 4 85 0 339 109 0 97 chr20 41234287 41234452 -30919430 + (CCCCG)n Simple_repeat Simple_repeat 1 149 0 2065 135 3 6 chr20 41235619 41235930 -30917952 - AluSx SINE Alu -2 310 1 1308 226 43 12 chr20 41236974 41237297 -30916585 + MLT1A1 LTR MaLR 1 333 -32 311 293 6 12 chr20 41237329 41237493 -30916389 + (TCTCTG)n Simple_repeat Simple_repeat 3 165 0 2199 121 0 6 chr20 41238018 41238332 -30915550 + AluSx SINE Alu 1 312 0 200 163 0 41 chr20 41238332 41238381 -30915501 + GA-rich Low_complexity Low_complexity 3 49 0 2347 81 3 0 chr20 41238704 41239002 -30914880 - AluY SINE Alu -12 299 1 617 248 69 14 chr20 41239005 41239150 -30914732 - FRAM SINE Alu -9 157 5 1165 101 6 0 chr20 41239168 41239327 -30914555 - AluSg/x SINE Alu -76 234 75 2174 89 24 3 chr20 41239375 41239668 -30914214 + AluSq SINE Alu 1 299 -14 2208 103 0 3 chr20 41239684 41239984 -30913898 + AluSg SINE Alu 1 299 -11 369 294 11 11 chr20 41239985 41240077 -30913805 + L1MC4 LINE L1 6618 6709 -1333 * 410 231 12 32 chr20 41240070 41240197 -30913685 + L1MC4 LINE L1 6612 6702 -1340 * 411 268 0 31 chr20 41240137 41240234 -30913648 - L1MC4 LINE L1 -1338 6704 6611 * 489 215 16 41 chr20 41240230 41240351 -30913531 + L1MC4 LINE L1 6611 6728 -1314 651 220 8 0 chr20 41240356 41240474 -30913408 - FLAM_C SINE Alu -24 119 1 2069 133 0 0 chr20 41240803 41241097 -30912785 + AluSx SINE Alu 1 294 -18 241 200 86 14 chr20 41241727 41241797 -30912085 - MIR3 SINE MIR -21 187 113 2430 75 0 0 chr20 41241872 41242177 -30911705 - AluY SINE Alu -4 307 3 2286 91 0 3 chr20 41242179 41242477 -30911405 - AluSx SINE Alu -15 297 1 261 70 0 0 chr20 41242478 41242521 -30911361 - Alu SINE Alu -258 43 1 220 184 0 0 chr20 41243260 41243298 -30910584 + CT-rich Low_complexity Low_complexity 4 41 0 1850 146 3 10 chr20 41243299 41243600 -30910282 - AluSq SINE Alu -4 309 11 259 325 50 17 chr20 41243601 41243721 -30910161 - MIR SINE MIR -111 151 28 349 376 39 6 chr20 41243972 41244153 -30909729 - MIR SINE MIR -19 243 57 23 33 0 0 chr20 41244842 41244872 -30909010 + GC_rich Low_complexity Low_complexity 1 30 0 198 71 0 0 chr20 41245777 41245805 -30908077 + (GGGGA)n Simple_repeat Simple_repeat 1 28 0 516 204 12 12 chr20 41245834 41245996 -30907886 + GA-rich Low_complexity Low_complexity 1 162 0 238 359 7 48 chr20 41246412 41246557 -30907325 + MIR3 SINE MIR 6 144 -64 194 330 96 0 chr20 41246696 41246790 -30907092 - MIR SINE MIR -119 143 41 677 246 121 27 chr20 41247005 41247402 -30906480 + MLT1E3 LTR MaLR 146 624 0 207 310 103 0 chr20 41247667 41247754 -30906128 + MIR SINE MIR 51 146 -116 2142 119 0 0 chr20 41248179 41248473 -30905409 + AluSq SINE Alu 1 294 -19 2350 99 0 0 chr20 41248533 41248837 -30905045 + AluSg SINE Alu 1 304 -6 244 264 19 0 chr20 41248879 41248932 -30904950 - L2 LINE L2 0 3272 3219 291 276 26 0 chr20 41249127 41249203 -30904679 + MIR SINE MIR 87 164 -98 2191 98 3 3 chr20 41249203 41249499 -30904383 + AluSq SINE Alu 1 296 -17 798 192 119 15 chr20 41249499 41249745 -30904137 - THE1C LTR MaLR -151 281 1 200 262 66 0 chr20 41250380 41250441 -30903441 - L2 LINE L2 -685 2629 2565 195 353 44 0 chr20 41251062 41251130 -30902752 - MIR SINE MIR -111 151 81 3921 198 35 51 chr20 41252039 41253024 -30900858 - LTR5 LTR ERVK 0 969 1 658 250 127 0 chr20 41255410 41255630 -30898252 + MER68 LTR ERV1 10 257 -305 334 252 142 0 chr20 41255638 41255765 -30898117 + MER68 LTR ERV1 369 513 -49 261 163 0 0 chr20 41257449 41257498 -30896384 + (TG)n Simple_repeat Simple_repeat 1 49 0 1754 166 21 0 chr20 41258895 41259179 -30894703 - AluJb SINE Alu -22 290 1 2638 36 0 0 chr20 41259182 41259488 -30894394 - AluY SINE Alu -5 306 1 290 294 244 6 chr20 41260684 41260844 -30893038 - L2 LINE L2 -17 3296 3099 276 275 88 0 chr20 41261042 41261122 -30892760 + MER5B DNA MER1_type 6 92 -86 403 262 49 0 chr20 41261126 41261248 -30892634 + L1M4 LINE L1 4629 4756 -1390 1036 133 6 0 chr20 41261338 41261496 -30892386 - AluSg/x SINE Alu -17 293 135 876 244 102 76 chr20 41261509 41262021 -30891861 + L1M4 LINE L1 4856 5380 -793 567 294 102 8 chr20 41262753 41262988 -30890894 + L1ME1 LINE L1 5308 5564 -602 920 114 8 0 chr20 41263051 41263183 -30890699 + FLAM_C SINE Alu 1 133 0 299 292 87 80 chr20 41263190 41263402 -30890480 + L1ME1 LINE L1 5676 5892 -274 2045 147 0 0 chr20 41263402 41263708 -30890174 - AluSg SINE Alu -4 306 1 299 292 87 80 chr20 41263708 41263759 -30890123 + L1ME1 LINE L1 5892 5941 -225 2245 63 0 33 chr20 41263838 41264140 -30889742 - AluY SINE Alu -19 292 1 223 286 29 86 chr20 41264152 41264225 -30889657 + MER5B DNA MER1_type 47 115 -63 2188 89 0 0 chr20 41264225 41264531 -30889351 - AluSg SINE Alu 0 306 1 223 286 29 86 chr20 41264531 41264561 -30889321 + MER5B DNA MER1_type 115 145 -33 801 138 0 0 chr20 41265341 41265457 -30888425 + AluSg/x SINE Alu 178 293 -19 2236 108 0 7 chr20 41265461 41265768 -30888114 + AluSc SINE Alu 1 305 -4 2079 124 0 0 chr20 41265789 41266088 -30887794 - AluJb SINE Alu -13 299 1 1253 202 39 0 chr20 41266810 41267067 -30886815 + AluJb SINE Alu 36 302 -10 2366 76 10 0 chr20 41267251 41267554 -30886328 - AluSp SINE Alu -7 306 1 204 40 0 0 chr20 41267852 41267877 -30886005 + (TA)n Simple_repeat Simple_repeat 2 26 0 762 236 0 0 chr20 41267883 41268027 -30885855 - FRAM SINE Alu -32 144 1 804 145 0 96 chr20 41268432 41268598 -30885284 - AluJb SINE Alu -26 286 137 351 341 82 11 chr20 41268814 41268996 -30884886 - L1MC5 LINE L1 -722 7239 7045 2202 77 3 7 chr20 41269003 41269288 -30884594 + AluSc SINE Alu 1 284 -25 533 272 74 9 chr20 41269412 41269629 -30884253 - L1MC5 LINE L1 -1097 6864 6634 1749 170 16 3 chr20 41269684 41269990 -30883892 + AluSx SINE Alu 1 310 -2 335 200 25 36 chr20 41270921 41271265 -30882617 + (CA)n Simple_repeat Simple_repeat 1 340 0 1788 161 0 7 chr20 41275324 41275615 -30878267 - AluJo SINE Alu -23 289 1 275 254 0 14 chr20 41275827 41275898 -30877984 + (CACG)n Simple_repeat Simple_repeat 3 72 0 2269 65 34 3 chr20 41276701 41276992 -30876890 - AluY SINE Alu -11 300 1 985 94 0 0 chr20 41276995 41277122 -30876760 - AluSq/x SINE Alu -185 127 1 312 223 0 134 chr20 41277153 41277237 -30876645 - L1M4 LINE L1 -1487 4659 4592 1628 163 7 33 chr20 41277237 41277537 -30876345 - AluJb SINE Alu -20 292 1 312 223 0 134 chr20 41277537 41277564 -30876318 - L1M4 LINE L1 -1554 4592 4563 1191 91 0 0 chr20 41285773 41286118 -30867764 + (CCA)n Simple_repeat Simple_repeat 1 345 0 1568 165 70 0 chr20 41294819 41295092 -30858790 + AluJb SINE Alu 1 292 -20 1575 197 142 44 chr20 41298101 41298552 -30855330 + LTR42 LTR ERVL 1 495 0 216 321 18 9 chr20 41299485 41299597 -30854285 + L2 LINE L2 2378 2490 -824 34 89 0 0 chr20 41300582 41300672 -30853210 + GC_rich Low_complexity Low_complexity 1 90 0 205 156 0 0 chr20 41301281 41301313 -30852569 + GA-rich Low_complexity Low_complexity 3 34 0 1751 146 4 0 chr20 41301704 41301978 -30851904 + AluSx SINE Alu 1 275 -37 1081 159 5 11 chr20 41302014 41302203 -30851679 - AluJb SINE Alu -1 311 124 2468 60 0 0 chr20 41302210 41302508 -30851374 - AluY SINE Alu -13 298 1 2000 120 0 7 chr20 41302508 41302800 -30851082 - AluSg1 SINE Alu -19 290 1 292 263 19 76 chr20 41302831 41303093 -30850789 - L1MC5 LINE L1 -30 7931 7685 1409 147 17 13 chr20 41303371 41303603 -30850279 - AluJb SINE Alu -8 304 72 397 315 87 0 chr20 41303637 41303786 -30850096 - MIR SINE MIR -22 240 79 1983 92 67 18 chr20 41303950 41304233 -30849649 - AluSq SINE Alu -16 297 1 3135 192 58 21 chr20 41304234 41304962 -30848920 - L1M4c LINE L1 -864 5780 5013 2082 119 10 10 chr20 41304962 41305272 -30848610 + AluSx SINE Alu 1 310 -2 3135 192 58 21 chr20 41305272 41305409 -30848473 - L1M4c LINE L1 -1631 5013 4883 1228 121 6 0 chr20 41305413 41305586 -30848296 - AluSg/x SINE Alu -5 305 132 2186 89 3 7 chr20 41305586 41305879 -30848003 - AluY SINE Alu -19 292 1 1484 178 34 192 chr20 41305879 41305937 -30847945 - L1M4c LINE L1 -1764 4880 4815 2314 96 0 0 chr20 41305937 41306239 -30847643 + AluSq SINE Alu 1 302 -11 1484 178 34 192 chr20 41306239 41306492 -30847390 - L1M4c LINE L1 -1829 4815 4524 2036 142 0 3 chr20 41306492 41306795 -30847087 + AluSx SINE Alu 1 302 -10 1484 178 34 192 chr20 41306795 41306998 -30846884 - L1M4c LINE L1 -2120 4524 4291 1804 154 11 3 chr20 41306998 41307283 -30846599 - AluJo SINE Alu -19 293 7 1484 178 34 192 chr20 41307283 41307446 -30846436 - L1M4c LINE L1 -2353 4291 4104 820 146 0 0 chr20 41307446 41307569 -30846313 - AluJb SINE Alu -178 134 12 2149 96 7 3 chr20 41307578 41307879 -30846003 - AluSg SINE Alu 0 310 9 1484 178 34 192 chr20 41307879 41308182 -30845700 - L1M4c LINE L1 -2549 4095 3746 225 0 0 0 chr20 41308182 41308207 -30845675 + (GA)n Simple_repeat Simple_repeat 2 26 0 1484 178 34 192 chr20 41308207 41308377 -30845505 - L1M4c LINE L1 -2898 3746 3551 2032 130 0 10 chr20 41308377 41308678 -30845204 - AluSx SINE Alu -14 298 1 1484 178 34 192 chr20 41308678 41308852 -30845030 - L1M4c LINE L1 -3093 3551 3771 2068 129 10 10 chr20 41308852 41309026 -30844856 - AluSx SINE Alu -2 310 134 2106 128 3 0 chr20 41309026 41309330 -30844552 - AluSx SINE Alu -7 305 1 2068 129 10 10 chr20 41309330 41309465 -30844417 - AluSx SINE Alu -177 135 1 1484 178 34 192 chr20 41309465 41309672 -30844210 - L1M4c LINE L1 -2872 3772 3534 883 83 41 55 chr20 41309678 41309823 -30844059 - AluSg/x SINE Alu 0 310 168 623 203 42 52 chr20 41309837 41309914 -30843968 - L1M4c LINE L1 -3101 3543 3467 1552 178 12 50 chr20 41309914 41310109 -30843773 - AluJo SINE Alu -3 309 129 2329 96 0 0 chr20 41310109 41310410 -30843472 + AluSq SINE Alu 1 301 -12 1552 178 12 50 chr20 41310410 41310535 -30843347 - AluJo SINE Alu -183 129 1 623 203 42 52 chr20 41310535 41310669 -30843213 - L1M4c LINE L1 -3177 3467 3334 1847 152 40 7 chr20 41310673 41310969 -30842913 - AluSx SINE Alu -6 306 1 773 177 15 0 chr20 41310974 41311104 -30842778 - FLAM_C SINE Alu -1 132 1 3695 209 31 81 chr20 41311104 41311133 -30842749 - L1M4 LINE L1 -4787 1859 1830 2401 78 0 0 chr20 41311133 41311429 -30842453 + AluY SINE Alu 1 296 -15 3695 209 31 81 chr20 41311429 41312074 -30841808 - L1M4 LINE L1 -4816 1830 1154 1998 152 0 9 chr20 41312074 41312390 -30841492 - AluSq SINE Alu 0 313 1 3695 209 31 81 chr20 41312390 41312498 -30841384 - L1M4 LINE L1 -5492 1154 1042 2105 115 0 7 chr20 41312498 41312803 -30841079 - AluSc SINE Alu -6 303 1 1541 212 3 10 chr20 41312805 41313102 -30840780 - AluJo SINE Alu -17 295 1 3695 209 31 81 chr20 41313102 41313418 -30840464 - L1M4 LINE L1 -5605 1041 711 2255 119 0 0 chr20 41313418 41313730 -30840152 + AluSx SINE Alu 1 312 0 3695 209 31 81 chr20 41313730 41314082 -30839800 - L1M4 LINE L1 -5935 711 460 2321 90 10 0 chr20 41314082 41314383 -30839499 + AluSx SINE Alu 1 304 -8 3695 209 31 81 chr20 41314383 41314508 -30839374 - L1M4 LINE L1 -6186 460 330 230 301 21 0 chr20 41314761 41314854 -30839028 - L1M4 LINE L1 -6443 99 5 363 215 39 23 chr20 41314858 41314988 -30838894 - L1M4c LINE L1 -4279 2546 2415 2078 92 18 0 chr20 41314991 41315273 -30838609 - AluSx SINE Alu -19 293 7 1315 241 85 87 chr20 41316021 41316145 -30837737 - L1M4c LINE L1 -4427 2398 2275 1493 172 28 35 chr20 41316145 41316430 -30837452 + AluJb SINE Alu 9 291 -21 1315 241 85 87 chr20 41316430 41316442 -30837440 - L1M4c LINE L1 -4550 2275 2264 2152 116 3 0 chr20 41316442 41316743 -30837139 + AluSx SINE Alu 11 312 0 838 150 0 23 chr20 41316750 41316883 -30836999 + FLAM_C SINE Alu 3 132 -1 1315 241 85 87 chr20 41316883 41317022 -30836860 - L1M4c LINE L1 -4567 2258 2120 1962 138 10 10 chr20 41317022 41317320 -30836562 - AluSg SINE Alu -12 298 1 2466 50 0 3 chr20 41317329 41317632 -30836250 - AluY SINE Alu -9 302 1 1315 241 85 87 chr20 41317632 41318161 -30835721 - L1M4c LINE L1 -4713 2112 1583 1980 116 0 20 chr20 41318161 41318487 -30835395 - AluSq SINE Alu 0 320 1 1315 241 85 87 chr20 41318487 41318553 -30835329 - L1M4c LINE L1 -5242 1583 1518 2182 81 0 7 chr20 41318553 41318836 -30835046 - AluSx SINE Alu -18 294 14 2033 108 0 36 chr20 41318846 41319175 -30834707 - AluSx SINE Alu 0 312 1 1957 160 12 21 chr20 41319177 41319514 -30834368 - L1MC1 LINE L1 -10 6323 5990 1315 241 85 87 chr20 41319514 41319576 -30834306 - L1M4c LINE L1 -5317 1508 1302 1626 134 0 4 chr20 41319577 41319830 -30834052 - AluSx SINE Alu 0 312 61 1381 136 5 0 chr20 41319833 41320039 -30833843 + AluSg/x SINE Alu 97 303 -9 763 243 152 20 chr20 41320040 41320375 -30833507 - L1M4b LINE L1 -5253 1694 1274 2075 120 0 13 chr20 41320375 41320684 -30833198 - AluY SINE Alu -6 305 1 763 243 152 20 chr20 41320684 41320765 -30833117 - L1M4b LINE L1 -5673 1274 1205 330 329 25 78 chr20 41321119 41321362 -30832520 - L1M4b LINE L1 -6246 609 380 2225 113 7 0 chr20 41321368 41321678 -30832204 - AluSx SINE Alu 0 312 1 452 325 76 68 chr20 41321729 41322126 -30831756 - L1M4 LINE L1 -1100 5046 4647 1374 165 9 4 chr20 41322133 41322363 -30831519 + AluJb SINE Alu 47 277 -35 252 0 0 0 chr20 41322369 41322397 -30831485 + (CA)n Simple_repeat Simple_repeat 1 28 0 304 195 122 12 chr20 41322403 41322485 -30831397 - L1ME LINE L1 -481 5640 5550 2208 82 10 0 chr20 41322839 41323130 -30830752 - AluSg SINE Alu -16 294 1 441 0 0 0 chr20 41323271 41323320 -30830562 + (TC)n Simple_repeat Simple_repeat 2 50 0 189 0 0 0 chr20 41323319 41323340 -30830542 + (TG)n Simple_repeat Simple_repeat 2 22 0 * 209 125 0 21 chr20 41323617 41323665 -30830217 + (TG)n Simple_repeat Simple_repeat 1 47 0 316 291 5 63 chr20 41323751 41323940 -30829942 + (TG)n Simple_repeat Simple_repeat 2 179 0 252 286 0 48 chr20 41323961 41324087 -30829795 + (TG)n Simple_repeat Simple_repeat 2 121 0 1087 171 45 2 chr20 41324095 41324380 -30829502 - MER2 DNA MER2_type 0 345 3 184 219 24 37 chr20 41324380 41324462 -30829420 + (TATG)n Simple_repeat Simple_repeat 1 81 0 279 266 0 0 chr20 41324493 41324606 -30829276 + (TG)n Simple_repeat Simple_repeat 1 113 0 582 270 2 3 chr20 41324620 41325240 -30828642 + (TG)n Simple_repeat Simple_repeat 1 618 0 741 208 0 0 chr20 41325288 41325466 -30828416 + (TG)n Simple_repeat Simple_repeat 2 179 0 207 162 0 0 chr20 41326544 41326581 -30827301 + (TG)n Simple_repeat Simple_repeat 1 37 0 28 0 0 0 chr20 41330419 41330447 -30823435 + GC_rich Low_complexity Low_complexity 1 28 0 26 30 0 0 chr20 41331853 41331886 -30821996 + GC_rich Low_complexity Low_complexity 1 33 0 34 72 0 0 chr20 41331957 41332026 -30821856 + GC_rich Low_complexity Low_complexity 1 69 0 417 109 0 0 chr20 41332060 41332124 -30821758 + (CGGGG)n Simple_repeat Simple_repeat 2 65 0 29 0 0 0 chr20 41332130 41332159 -30821723 + GC_rich Low_complexity Low_complexity 1 29 0 182 37 37 0 chr20 41332177 41332204 -30821678 + (CCCGG)n Simple_repeat Simple_repeat 1 28 0 39 98 0 0 chr20 41332242 41332365 -30821517 + GC_rich Low_complexity Low_complexity 1 123 0 53 90 0 0 chr20 41332464 41332608 -30821274 + GC_rich Low_complexity Low_complexity 1 144 0 23 0 0 0 chr20 41332823 41332846 -30821036 + GC_rich Low_complexity Low_complexity 1 23 0 211 193 0 53 chr20 41334853 41334910 -30818972 + C-rich Low_complexity Low_complexity 2 55 0 333 282 6 39 chr20 41339656 41339902 -30813980 + (CGGGG)n Simple_repeat Simple_repeat 1 237 0 2416 77 0 0 chr20 41341674 41341985 -30811897 - AluY SINE Alu 0 311 1 1644 138 55 35 chr20 41342598 41342888 -30810994 - AluJo SINE Alu -16 296 1 1937 153 10 0 chr20 41342972 41343273 -30810609 + AluJb SINE Alu 1 304 -8 927 109 0 29 chr20 41346809 41346946 -30806936 - FLAM_C SINE Alu 0 133 1 2463 48 0 0 chr20 41346955 41347248 -30806634 - AluY SINE Alu -18 293 1 22 35 0 0 chr20 41347304 41347333 -30806549 + AT_rich Low_complexity Low_complexity 1 29 0 811 268 100 34 chr20 41347579 41347960 -30805922 - MLT1C LTR MaLR -18 449 44 402 343 209 3 chr20 41348935 41349241 -30804641 - L1ME3 LINE L1 -29 6202 5834 367 274 46 46 chr20 41349242 41349417 -30804465 - L1ME3 LINE L1 -430 5809 5635 2130 93 4 0 chr20 41349494 41349772 -30804110 - AluSx SINE Alu -33 279 1 254 228 13 38 chr20 41349776 41349855 -30804027 - L1ME3 LINE L1 -1194 5021 4945 320 339 35 0 chr20 41349893 41350008 -30803874 - L1ME3 LINE L1 -1353 4862 4744 647 234 62 5 chr20 41350009 41350201 -30803681 + MER74A LTR ERVL 1 203 -355 281 204 31 99 chr20 41350326 41350517 -30803365 + (CCCA)n Simple_repeat Simple_repeat 2 179 0 1202 225 52 6 chr20 41350550 41350914 -30802968 + MER74A LTR ERVL 156 536 -22 829 237 95 72 chr20 41350939 41351082 -30802800 - L1ME3 LINE L1 -1468 4747 4609 2321 54 10 7 chr20 41351082 41351380 -30802502 - AluY SINE Alu -11 300 2 829 237 95 72 chr20 41351380 41351738 -30802144 - L1ME3 LINE L1 -1606 4609 4231 909 140 0 22 chr20 41351738 41351874 -30802008 - FLAM_C SINE Alu 0 133 1 829 237 95 72 chr20 41351874 41351899 -30801983 - L1ME3 LINE L1 -1984 4231 4208 1305 335 55 5 chr20 41352015 41352767 -30801115 - L1ME3 LINE L1 -2013 4202 3414 2258 69 31 3 chr20 41352815 41353106 -30800776 - AluY SINE Alu -12 299 1 781 184 0 54 chr20 41353175 41353322 -30800560 - AluJo SINE Alu -49 263 125 1071 211 51 156 chr20 41353323 41353347 -30800535 - L1ME3 LINE L1 -2978 3237 3212 2142 125 0 0 chr20 41353347 41353644 -30800238 - AluSx SINE Alu -11 301 5 1071 211 51 156 chr20 41353644 41353851 -30800031 - L1ME3 LINE L1 -3003 3212 2985 2225 98 0 0 chr20 41353851 41354147 -30799735 + AluSg SINE Alu 1 296 -14 1071 211 51 156 chr20 41354147 41354722 -30799160 - L1ME3 LINE L1 -3230 2985 2546 2012 89 14 11 chr20 41354722 41355034 -30798848 + AluSg SINE Alu 2 314 0 1071 211 51 156 chr20 41355034 41355198 -30798684 - L1ME3 LINE L1 -3669 2546 2366 1698 195 7 0 chr20 41355201 41355509 -30798373 - AluJo SINE Alu -2 310 1 259 224 96 39 chr20 41355536 41355668 -30798214 - L1ME3 LINE L1 -4119 2277 2133 2257 160 91 5 chr20 41355668 41356062 -30797820 - MSTA LTR MaLR 0 428 1 259 224 96 39 chr20 41356062 41356085 -30797797 - L1ME3 LINE L1 -4263 2133 2113 1046 181 0 16 chr20 41356305 41356487 -30797395 - AluJb SINE Alu -2 310 132 2115 108 7 3 chr20 41356504 41356799 -30797083 + AluSx SINE Alu 1 296 -16 368 286 94 12 chr20 41356799 41356944 -30796938 - L1ME3 LINE L1 -4765 1631 1466 2296 82 13 0 chr20 41356944 41357248 -30796634 - AluSp SINE Alu -5 308 1 368 286 94 12 chr20 41357248 41357266 -30796616 - L1ME3 LINE L1 -4930 1466 1451 837 90 0 0 chr20 41357266 41357377 -30796505 - AluSg/x SINE Alu -10 302 192 600 148 0 0 chr20 41357377 41357485 -30796397 + (TG)n Simple_repeat Simple_repeat 1 108 0 225 269 43 11 chr20 41357507 41357600 -30796282 - L1ME3 LINE L1 -5674 531 436 1777 160 3 3 chr20 41357782 41358075 -30795807 - AluJo SINE Alu -15 297 5 2399 90 0 0 chr20 41358555 41358865 -30795017 - AluSq SINE Alu -3 310 1 2161 82 0 52 chr20 41360668 41360974 -30792908 + AluSx SINE Alu 11 300 -12 2073 108 20 3 chr20 41364348 41364645 -30789237 - AluSq SINE Alu -11 302 1 1977 129 0 0 chr20 41364786 41365072 -30788810 + AluSx SINE Alu 1 286 -26 405 0 0 0 chr20 41365072 41365117 -30788765 + (CA)n Simple_repeat Simple_repeat 2 46 0 1307 135 39 14 chr20 41365580 41365787 -30788095 - AluJb SINE Alu -14 298 87 183 42 0 0 chr20 41366398 41366422 -30787460 + (C)n Simple_repeat Simple_repeat 1 24 0 2575 45 0 0 chr20 41367041 41367352 -30786530 - AluY SINE Alu 0 311 1 715 191 285 32 chr20 41368696 41368872 -30785010 + L1P4 LINE L1 4989 5119 -1055 2349 81 0 0 chr20 41368872 41369168 -30784714 + AluSx SINE Alu 2 297 -15 715 191 285 32 chr20 41369168 41369370 -30784512 + L1P4 LINE L1 5119 5457 -717 1963 225 47 83 chr20 41369507 41369537 -30784345 + L1MB7 LINE L1 5451 5481 -703 1540 184 30 20 chr20 41369537 41369836 -30784046 + AluJo SINE Alu 1 302 -10 1963 225 47 83 chr20 41369836 41370565 -30783317 + L1MB7 LINE L1 5481 6183 -1 810 254 104 51 chr20 41371187 41371542 -30782340 - MLT1A2 LTR MaLR 0 374 1 29 0 0 0 chr20 41371562 41371591 -30782291 + AT_rich Low_complexity Low_complexity 1 29 0 2272 85 0 20 chr20 41371591 41371757 -30782125 - AluSp SINE Alu -14 299 140 2510 54 0 10 chr20 41371757 41372071 -30781811 - AluY SINE Alu 0 311 1 2272 85 0 20 chr20 41372071 41372209 -30781673 - AluSp SINE Alu -173 140 1 2045 134 10 3 chr20 41372341 41372648 -30781234 + AluSq SINE Alu 2 310 -3 455 300 32 0 chr20 41372679 41372869 -30781013 + L1M4 LINE L1 4872 5067 -1079 2382 62 0 0 chr20 41372870 41373160 -30780722 + AluY SINE Alu 1 290 -21 488 251 111 19 chr20 41373165 41373198 -30780684 + L1M4 LINE L1 5169 5198 -984 2180 106 0 37 chr20 41373198 41373520 -30780362 + AluSg SINE Alu 1 310 0 488 251 111 19 chr20 41373520 41373701 -30780181 + L1M4 LINE L1 5198 5406 -776 270 215 252 9 chr20 41373747 41373854 -30780028 + L1ME LINE L1 5304 5436 -726 1984 120 7 3 chr20 41373858 41374149 -30779733 + AluSx SINE Alu 1 292 -20 2370 72 0 7 chr20 41374153 41374457 -30779425 + AluY SINE Alu 1 302 -9 566 234 258 21 chr20 41374516 41374904 -30778978 + MLT1D LTR MaLR 16 495 -10 1754 124 9 87 chr20 41375172 41375494 -30778388 + AluJb SINE Alu 1 297 -15 2326 86 0 3 chr20 41375497 41375800 -30778082 + AluSc SINE Alu 1 302 -7 2347 73 20 0 chr20 41377301 41377604 -30776278 + AluSc SINE Alu 1 309 0 2129 96 13 10 chr20 41377628 41377930 -30775952 + AluSq SINE Alu 1 303 -10 537 200 29 36 chr20 41378672 41378812 -30775070 + MER20 DNA MER1_type 49 187 -32 2171 80 0 23 chr20 41378834 41379159 -30774723 - AluSc SINE Alu 0 309 1 630 185 44 52 chr20 41379160 41379295 -30774587 - AluJb SINE Alu -172 140 7 555 203 187 5 chr20 41379394 41379501 -30774381 + L1MB4 LINE L1 5960 6046 -134 1961 211 110 68 chr20 41379501 41380075 -30773807 + MER7C DNA MER2_type 4 601 -1 555 203 187 5 chr20 41380075 41380154 -30773728 + L1MB4 LINE L1 6046 6180 0 901 178 6 12 chr20 41380459 41380628 -30773254 - AluJb SINE Alu -9 303 136 2161 104 3 22 chr20 41380906 41381182 -30772700 + AluSx SINE Alu 1 272 -40 2181 56 70 3 chr20 41381182 41381466 -30772416 - AluSp SINE Alu -10 303 1 2161 104 3 22 chr20 41381466 41381505 -30772377 + AluSx SINE Alu 272 310 -2 2351 72 0 3 chr20 41383563 41383869 -30770013 + AluY SINE Alu 1 305 -6 1021 223 60 19 chr20 41384219 41384593 -30769289 - MLT1C LTR MaLR 0 390 2 2212 89 3 7 chr20 41384863 41385167 -30768715 - AluSx SINE Alu -9 303 1 28 29 0 0 chr20 41386194 41386229 -30767653 + AT_rich Low_complexity Low_complexity 1 35 0 2472 47 0 13 chr20 41386254 41386555 -30767327 + AluY SINE Alu 1 297 -14 1551 155 0 4 chr20 41386593 41386838 -30767044 - AluJo SINE Alu -64 248 5 2227 84 3 0 chr20 41388893 41389214 -30764668 + AluSq SINE Alu 1 322 0 1787 116 0 92 chr20 41389237 41389355 -30764527 + AluJb SINE Alu 1 128 -184 7364 48 12 0 chr20 41389355 41390700 -30763182 - L1PA5 LINE L1 0 6154 4800 1787 116 0 92 chr20 41390700 41390742 -30763140 + AluJb SINE Alu 128 172 -140 2398 83 0 0 chr20 41390742 41391043 -30762839 + AluSx SINE Alu 1 301 -11 1787 116 0 92 chr20 41391043 41391209 -30762673 + AluJb SINE Alu 172 298 -14 1789 153 0 30 chr20 41391389 41391689 -30762193 - AluJb SINE Alu -21 291 1 1999 125 7 3 chr20 41391702 41391990 -30761892 - AluSx SINE Alu -16 296 8 689 282 139 27 chr20 41392019 41392423 -30761459 + L1ME2 LINE L1 5322 5770 -396 323 263 120 28 chr20 41392543 41392729 -30761153 + L1ME2 LINE L1 5833 6039 -123 5479 120 88 19 chr20 41392729 41394171 -30759711 + pTR5 LTR ERV1 743 2438 0 283 271 0 0 chr20 41394221 41394291 -30759591 + L1MA10 LINE L1 6252 6321 -13 793 190 24 52 chr20 41394360 41394490 -30759392 + MLT1C LTR MaLR 1 124 -343 2090 116 10 0 chr20 41394490 41394782 -30759100 + AluSx SINE Alu 1 295 -17 793 190 24 52 chr20 41394782 41394862 -30759020 + MLT1C LTR MaLR 124 205 -262 373 294 11 1 chr20 41395218 41395341 -30758541 + MLT1B LTR MaLR 239 378 -12 1628 171 31 0 chr20 41396057 41396343 -30757539 - AluJb SINE Alu -12 300 6 2238 89 0 0 chr20 41396961 41397263 -30756619 + AluSg SINE Alu 1 302 -8 2319 85 0 0 chr20 41397273 41397568 -30756314 - AluSc SINE Alu -14 295 1 796 202 6 36 chr20 41397664 41397832 -30756050 + FRAM SINE Alu 1 163 -3 453 286 100 8 chr20 41397841 41398082 -30755800 + MLT1C LTR MaLR 205 467 0 2184 80 0 58 chr20 41398099 41398424 -30755458 - AluSx SINE Alu -6 306 1 21 0 0 0 chr20 41398429 41398450 -30755432 + AT_rich Low_complexity Low_complexity 1 21 0 2221 107 0 16 chr20 41398469 41398786 -30755096 + AluSq SINE Alu 1 312 -1 1103 140 0 0 chr20 41398961 41399125 -30754757 - AluSg/x SINE Alu -15 297 134 2426 69 0 0 chr20 41399125 41399431 -30754451 - AluY SINE Alu -5 306 1 359 161 32 200 chr20 41399431 41399586 -30754296 - L1 LINE L1 -2562 3584 3456 329 305 73 57 chr20 41399569 41399693 -30754189 - L1M4 LINE L1 -2565 3581 3452 * 2043 126 0 10 chr20 41399693 41399994 -30753888 - AluSx SINE Alu -14 298 1 329 305 73 57 chr20 41399994 41400046 -30753836 - L1M4 LINE L1 -2694 3452 3402 2405 48 3 13 chr20 41401045 41401355 -30752527 + AluY SINE Alu 4 310 -1 1727 163 3 3 chr20 41402039 41402334 -30751548 + AluJb SINE Alu 11 305 -7 232 328 92 0 chr20 41402466 41402597 -30751285 + L1ME LINE L1 5614 5756 -365 1900 149 0 0 chr20 41402836 41403124 -30750758 + AluSx SINE Alu 24 311 -1 1369 151 128 11 chr20 41404577 41404842 -30749040 + AluSc SINE Alu 1 296 -3 1772 135 3 14 chr20 41404844 41405158 -30748724 + AluSg SINE Alu 1 311 0 2036 125 7 13 chr20 41405163 41405467 -30748415 + AluSc SINE Alu 1 302 -7 2379 90 3 0 chr20 41405516 41405826 -30748056 + AluSx SINE Alu 1 311 -1 345 373 123 15 chr20 41405938 41406206 -30747676 + L1MC5 LINE L1 7360 7656 -305 2433 74 3 0 chr20 41406302 41406611 -30747271 + AluY SINE Alu 1 310 -1 26 64 0 0 chr20 41406739 41406786 -30747096 + AT_rich Low_complexity Low_complexity 1 47 0 226 377 68 0 chr20 41407032 41407252 -30746630 + Charlie4a DNA MER1_type 186 420 -88 1026 187 0 0 chr20 41407252 41407434 -30746448 + AluJb SINE Alu 118 299 -13 233 212 48 41 chr20 41407519 41407665 -30746217 + (CGGTG)n Simple_repeat Simple_repeat 3 149 0 * 254 147 42 100 chr20 41407564 41407754 -30746128 + (CAGTG)n Simple_repeat Simple_repeat 1 179 0 229 190 50 56 chr20 41408165 41408344 -30745538 + (CAGTG)n Simple_repeat Simple_repeat 1 178 0 311 122 67 67 chr20 41408385 41408549 -30745333 + (CGGTG)n Simple_repeat Simple_repeat 1 164 0 1023 246 91 48 chr20 41409007 41409172 -30744710 + MLT1C LTR MaLR 1 157 -310 2355 83 3 3 chr20 41409172 41409485 -30744397 + AluSp SINE Alu 1 313 0 1731 163 51 0 chr20 41409487 41409782 -30744100 + AluJo SINE Alu 1 310 -2 2212 121 0 3 chr20 41409782 41410095 -30743787 + AluSx SINE Alu 1 312 0 1023 246 91 48 chr20 41410095 41410364 -30743518 + MLT1C LTR MaLR 156 458 -9 2071 94 0 56 chr20 41410923 41411242 -30742640 + AluSg SINE Alu 1 301 -9 2209 86 3 3 chr20 41411242 41411533 -30742349 + AluSg SINE Alu 1 291 -19 2337 73 0 20 chr20 41412447 41412748 -30741134 - AluY SINE Alu -16 295 1 2147 76 17 0 chr20 41412793 41413081 -30740801 - AluSp SINE Alu -20 293 1 1581 173 24 10 chr20 41413083 41413245 -30740637 - AluSg SINE Alu -17 293 124 2217 76 28 0 chr20 41413245 41413534 -30740348 - AluSq SINE Alu -16 297 1 1581 173 24 10 chr20 41413534 41413660 -30740222 - AluSg SINE Alu -186 124 1 753 155 16 16 chr20 41413661 41413790 -30740092 - FLAM_A SINE Alu 0 142 14 2168 108 0 26 chr20 41413790 41414097 -30739785 - AluSq SINE Alu -14 299 1 858 135 0 0 chr20 41415081 41415207 -30738675 + AluJ SINE Alu 1 126 -186 1926 138 0 22 chr20 41415228 41415547 -30738335 + AluSx SINE Alu 1 312 0 1743 164 9 31 chr20 41415558 41415876 -30738006 + AluSx SINE Alu 1 311 -1 1088 143 18 0 chr20 41415888 41416056 -30737826 + AluJ SINE Alu 121 291 -21 279 0 0 0 chr20 41416208 41416239 -30737643 + (TG)n Simple_repeat Simple_repeat 2 32 0 2281 97 0 0 chr20 41417468 41417767 -30736115 + AluSx SINE Alu 1 299 -13 2228 78 0 10 chr20 41418790 41419085 -30734797 + AluY SINE Alu 1 292 -19 190 255 39 0 chr20 41419544 41419595 -30734287 + L2 LINE L2 3199 3251 -21 2807 6 0 3 chr20 41419675 41419990 -30733892 + AluYb8 SINE Alu 1 314 -4 984 189 0 0 chr20 41420259 41420434 -30733448 - FRAM SINE Alu -1 175 1 233 153 56 14 chr20 41422720 41422792 -30731090 + (CCCCG)n Simple_repeat Simple_repeat 1 75 0 29 0 0 0 chr20 41422967 41422996 -30730886 + GC_rich Low_complexity Low_complexity 1 29 0 367 50 0 33 chr20 41424286 41424346 -30729536 + (CA)n Simple_repeat Simple_repeat 1 58 0 298 117 44 61 chr20 41427902 41428082 -30725800 + (CCCTG)n Simple_repeat Simple_repeat 2 178 0 278 254 0 6 chr20 41432976 41433157 -30720725 + G-rich Low_complexity Low_complexity 1 180 0 21 0 0 0 chr20 41435174 41435195 -30718687 + GC_rich Low_complexity Low_complexity 1 21 0 473 268 87 59 chr20 41439877 41440198 -30713684 - L1ME2 LINE L1 -131 6033 5704 612 284 180 5 chr20 41440232 41440654 -30713228 + MER74A LTR ERVL 17 512 -46 320 303 8 16 chr20 41440966 41441088 -30712794 + MER112 DNA MER1_type 100 220 -40 334 253 68 27 chr20 41441749 41441895 -30711987 - L1ME2 LINE L1 -684 5480 5329 719 344 65 20 chr20 41441900 41442484 -30711398 - L1M4 LINE L1 -3317 2829 2220 567 251 92 77 chr20 41442481 41442688 -30711194 - L1ME2 LINE L1 -91 6073 5853 * 5324 77 49 3 chr20 41442688 41443418 -30710464 - MER4E LTR ERV1 0 766 3 567 251 92 77 chr20 41443418 41443529 -30710353 - L1ME2 LINE L1 -311 5853 5745 304 364 11 62 chr20 41443875 41444051 -30709831 - L1ME3A LINE L1 -241 5929 5763 348 307 57 69 chr20 41444253 41444585 -30709297 - L1MB7 LINE L1 -213 5971 5644 957 280 106 33 chr20 41444736 41445060 -30708822 - L1ME2 LINE L1 -235 6323 6024 2173 106 0 7 chr20 41445060 41445362 -30708520 - AluSc SINE Alu -9 300 1 957 280 106 33 chr20 41445362 41445945 -30707937 - L1ME2 LINE L1 -534 6024 5341 321 347 113 47 chr20 41446470 41446790 -30707092 - L1ME2 LINE L1 -4465 2075 1735 413 114 0 14 chr20 41446791 41446861 -30707021 - U6 snRNA snRNA -25 82 14 237 233 0 17 chr20 41447454 41447514 -30706368 + (TG)n Simple_repeat Simple_repeat 2 60 0 524 257 0 6 chr20 41447587 41447766 -30706116 + (CA)n Simple_repeat Simple_repeat 1 178 0 340 284 43 7 chr20 41448186 41448327 -30705555 + MLT1J LTR MaLR 121 266 -245 1744 163 3 29 chr20 41449493 41449806 -30704076 + AluJb SINE Alu 1 305 -7 420 313 104 29 chr20 41449811 41450156 -30703726 - L1M4 LINE L1 -3126 3020 2650 300 301 0 10 chr20 41455320 41455423 -30698459 + GA-rich Low_complexity Low_complexity 1 102 0 466 370 83 21 chr20 41459459 41460534 -30693348 + L1M4 LINE L1 3688 4828 -1318 204 267 191 0 chr20 41464276 41464391 -30689491 + MIR SINE MIR 30 166 -65 180 342 54 36 chr20 41465400 41465511 -30688371 + MIR SINE MIR 111 223 -39 26 30 0 0 chr20 41466660 41466693 -30687189 + AT_rich Low_complexity Low_complexity 1 33 0 1257 214 62 7 chr20 41466725 41467015 -30686867 - AluSg SINE Alu -4 306 1 218 323 146 0 chr20 41469597 41469727 -30684155 + L3 LINE CR1 1426 1574 -3 288 180 90 10 chr20 41469897 41469997 -30683885 + (CTGGGG)n Simple_repeat Simple_repeat 1 108 0 198 102 0 68 chr20 41470631 41470690 -30683192 + (CACAC)n Simple_repeat Simple_repeat 4 58 0 905 195 128 8 chr20 41473093 41473350 -30680532 + L1MB8 LINE L1 5886 6173 -5 217 339 59 10 chr20 41473476 41473627 -30680255 - MIR SINE MIR -72 136 2 180 0 0 0 chr20 41479474 41479494 -30674388 + (GGGA)n Simple_repeat Simple_repeat 3 22 0 207 301 7 35 chr20 41479553 41479696 -30674186 + GA-rich Low_complexity Low_complexity 2 140 0 221 320 0 0 chr20 41479953 41480056 -30673826 + GA-rich Low_complexity Low_complexity 2 104 0 240 35 0 0 chr20 41480393 41480422 -30673460 + (GGGA)n Simple_repeat Simple_repeat 2 30 0 531 236 185 15 chr20 41480585 41480777 -30673105 - MIR SINE MIR -3 259 34 729 189 0 0 chr20 41480869 41480991 -30672891 + FLAM_A SINE Alu 16 137 -5 1247 281 34 56 chr20 41481252 41481593 -30672289 + L1MC5 LINE L1 7260 7580 -381 2172 104 0 0 chr20 41481593 41481880 -30672002 + AluSx SINE Alu 1 287 -25 1247 281 34 56 chr20 41481880 41482220 -30671662 + L1MC5 LINE L1 7580 7926 -35 * 2723 264 92 19 chr20 41482217 41482890 -30670992 + L1ME3 LINE L1 2144 2766 -3449 2282 86 0 0 chr20 41482890 41483181 -30670701 - AluSx SINE Alu -21 291 1 2723 264 92 19 chr20 41483181 41484113 -30669769 + L1ME3 LINE L1 2766 3831 -2384 802 209 0 64 chr20 41484116 41484288 -30669594 + AluJo SINE Alu 122 282 -30 347 299 0 52 chr20 41484291 41484388 -30669494 - L1MC4 LINE L1 -1337 6705 6614 237 281 89 7 chr20 41484407 41484553 -30669329 + L1ME3 LINE L1 3897 4054 -2161 259 286 0 0 chr20 41484633 41484703 -30669179 + L1MD2 LINE L1 6050 6119 -240 932 289 112 18 chr20 41484745 41485247 -30668635 + L1ME3 LINE L1 5488 6036 -195 1904 126 9 28 chr20 41485627 41485944 -30667938 + AluJb SINE Alu 1 311 -1 226 86 0 267 chr20 41486752 41486984 -30666898 + (GGCTG)n Simple_repeat Simple_repeat 4 173 0 319 202 0 32 chr20 41490157 41490251 -30663631 + C-rich Low_complexity Low_complexity 1 91 0 2040 125 0 0 chr20 41492513 41492800 -30661082 - AluSq SINE Alu -22 291 5 840 167 16 88 chr20 41503902 41504094 -30649788 + FRAM SINE Alu 1 176 0 2078 108 0 10 chr20 41504204 41504499 -30649383 - AluSx SINE Alu -15 297 6 2177 107 0 23 chr20 41504855 41505165 -30648717 + AluSx SINE Alu 1 303 -9 21 0 0 0 chr20 41510028 41510049 -30643833 + GC_rich Low_complexity Low_complexity 1 21 0 200 222 14 104 chr20 41511805 41511949 -30641933 + G-rich Low_complexity Low_complexity 2 132 0 1480 236 121 6 chr20 41512391 41512868 -30641014 - L1ME1 LINE L1 -10 6154 5542 2113 127 0 0 chr20 41512868 41513168 -30640714 + AluSx SINE Alu 1 300 -12 1480 236 121 6 chr20 41513168 41513306 -30640576 - L1ME1 LINE L1 -622 5542 5421 189 369 15 0 chr20 41514244 41514309 -30639573 + MIR SINE MIR 81 146 -62 399 278 0 0 chr20 41514428 41514525 -30639357 - MIR SINE MIR -118 144 48 239 317 12 12 chr20 41514805 41514887 -30638995 + (TATG)n Simple_repeat Simple_repeat 1 82 0 1521 198 34 9 chr20 41515519 41515868 -30638014 + MLT1A1 LTR MaLR 8 365 0 259 188 87 0 chr20 41515868 41515937 -30637945 + LTR16A1 LTR ERVL 383 457 0 246 356 0 0 chr20 41516983 41517073 -30636809 - L1ME LINE L1 -411 5710 5621 322 279 31 58 chr20 41518143 41518343 -30635539 - MLT1K LTR MaLR 0 598 422 1948 140 0 19 chr20 41519010 41519318 -30634564 + AluSx SINE Alu 1 302 -10 228 164 36 36 chr20 41519556 41519611 -30634271 - L2 LINE L2 -4 3268 3214 1506 159 165 71 chr20 41520153 41520380 -30633502 + LTR54 LTR ERV1 1 205 -305 2185 84 11 0 chr20 41520380 41520664 -30633218 - AluSc SINE Alu -18 291 5 2021 119 7 0 chr20 41520667 41520953 -30632929 - AluSx SINE Alu -10 302 15 1506 159 165 71 chr20 41520953 41521187 -30632695 + LTR54 LTR ERV1 206 510 0 281 317 30 10 chr20 41521687 41521788 -30632094 + MIR SINE MIR 95 197 -65 500 249 132 89 chr20 41522234 41522583 -30631299 + MLT1A1 LTR MaLR 1 364 -1 211 150 25 0 chr20 41522647 41522687 -30631195 + GA-rich Low_complexity Low_complexity 1 41 0 494 204 0 0 chr20 41525813 41525901 -30627981 + AluJ/FLAM SINE Alu 1 88 -224 654 254 124 38 chr20 41525903 41526250 -30627632 + MLT1C LTR MaLR 91 467 0 286 335 0 0 chr20 41526428 41526604 -30627278 + (TCCTG)n Simple_repeat Simple_repeat 3 178 0 200 369 0 0 chr20 41526608 41526784 -30627098 + CT-rich Low_complexity Low_complexity 1 176 0 * 209 352 0 0 chr20 41526708 41526884 -30626998 + (TCCTG)n Simple_repeat Simple_repeat 3 178 0 281 325 0 0 chr20 41527038 41527204 -30626678 + (TCCTG)n Simple_repeat Simple_repeat 3 168 0 622 206 0 7 chr20 41528465 41528612 -30625270 - L1MB7 LINE L1 0 6178 6039 313 281 12 18 chr20 41529714 41529881 -30624001 + G-rich Low_complexity Low_complexity 2 167 0 21 57 0 0 chr20 41530184 41530219 -30623663 + GC_rich Low_complexity Low_complexity 1 35 0 28 0 0 0 chr20 41530500 41530528 -30623354 + GC_rich Low_complexity Low_complexity 1 28 0 6596 51 30 0 chr20 41532498 41533179 -30620703 + LTR13 LTR ERVK 2 718 -289 212 0 36 0 chr20 41533179 41533207 -30620675 + (TC)n Simple_repeat Simple_repeat 2 30 0 6596 51 30 0 chr20 41533207 41533409 -30620473 + LTR13 LTR ERVK 718 912 -95 215 151 41 55 chr20 41533409 41533482 -30620400 + (GGGTG)n Simple_repeat Simple_repeat 4 75 0 245 213 40 93 chr20 41533922 41533997 -30619885 - MIR SINE MIR -48 160 89 220 258 186 0 chr20 41534660 41534757 -30619125 - MIR SINE MIR -36 226 112 272 250 16 0 chr20 41534927 41534982 -30618900 - MER58A DNA MER1_type -7 217 162 343 256 44 0 chr20 41534982 41535072 -30618810 - MER58A DNA MER1_type 0 133 40 292 275 66 11 chr20 41535645 41535736 -30618146 + L2 LINE L2 3212 3307 -6 287 327 10 0 chr20 41537444 41537548 -30616334 + MIR SINE MIR 69 173 -89 2441 57 0 3 chr20 41538135 41538434 -30615448 + AluY SINE Alu 1 298 -13 274 298 65 40 chr20 41539365 41539489 -30614393 - MIR3 SINE MIR -68 140 14 186 43 0 0 chr20 41541934 41541957 -30611925 + (TCCA)n Simple_repeat Simple_repeat 1 23 0 248 248 105 29 chr20 41541964 41542069 -30611813 - L2 LINE L2 -20 3252 3140 207 209 0 0 chr20 41543086 41543129 -30610753 + A-rich Low_complexity Low_complexity 1 43 0 240 267 50 0 chr20 41547294 41547354 -30606528 - MIR SINE MIR -173 89 27 298 136 0 85 chr20 41548948 41549066 -30604816 + (CCCCCT)n Simple_repeat Simple_repeat 4 111 0 206 227 173 0 chr20 41549971 41550046 -30603836 + L3b LINE CR1 1326 1413 -170 241 379 0 0 chr20 41550057 41550226 -30603656 + CT-rich Low_complexity Low_complexity 2 170 0 * 246 354 6 6 chr20 41550134 41550309 -30603573 + C-rich Low_complexity Low_complexity 6 180 0 226 262 146 10 chr20 41551040 41551143 -30602739 + L1MD2 LINE L1 6226 6342 -17 4057 82 24 15 chr20 41552040 41552588 -30601294 + MER41A LTR ERV1 2 554 0 1217 203 95 62 chr20 41552588 41552958 -30600924 + LTR26B LTR ERV1 3 384 -147 1035 171 0 17 chr20 41552959 41553140 -30600742 + AluJo SINE Alu 48 225 -87 3564 119 68 70 chr20 41553147 41553922 -30599960 + LTR1 LTR ERV1 12 785 0 888 188 0 6 chr20 41606136 41606296 -30547586 - FRAM SINE Alu -7 159 1 372 246 160 27 chr20 41606520 41606707 -30547175 - MLT1E1 LTR MaLR -6 648 437 * 421 183 8 87 chr20 41606705 41606728 -30547154 + MER53 DNA DNA 73 96 -93 2096 125 3 7 chr20 41606728 41607025 -30546857 + AluJo SINE Alu 1 296 -16 421 183 8 87 chr20 41607025 41607127 -30546755 + MER53 DNA DNA 96 188 -1 375 289 239 13 chr20 41607129 41607434 -30546448 - MLT1E1 LTR MaLR -273 381 8 2353 97 3 7 chr20 41610201 41610511 -30543371 - AluSx SINE Alu -3 309 1 1641 163 89 0 chr20 41621706 41621976 -30531906 + AluJb SINE Alu 1 294 -18 527 54 27 0 chr20 41623172 41623246 -30530636 + AluSg/x SINE Alu 218 293 -17 216 229 14 29 chr20 41626285 41626355 -30527527 + (TG)n Simple_repeat Simple_repeat 2 70 0 2073 109 7 17 chr20 41630986 41631153 -30522729 - AluSg SINE Alu -11 299 135 2405 74 0 6 chr20 41631153 41631464 -30522418 - AluSc SINE Alu 0 309 1 2073 109 7 17 chr20 41631464 41631598 -30522284 - AluSg SINE Alu -175 135 1 2284 95 0 3 chr20 41631787 41632093 -30521789 + AluSx SINE Alu 3 307 -5 210 402 0 0 chr20 41635410 41635507 -30518375 + (CTGGGG)n Simple_repeat Simple_repeat 2 98 0 210 366 8 8 chr20 41635545 41635679 -30518203 + G-rich Low_complexity Low_complexity 1 134 0 1659 292 131 88 chr20 41638741 41639602 -30514280 - ERVL LTR ERVL -3527 2237 1415 1188 89 0 0 chr20 41639602 41639782 -30514100 + (TGGGGG)n Simple_repeat Simple_repeat 1 180 0 1659 292 131 88 chr20 41639782 41640469 -30513413 - ERVL LTR ERVL -4349 1415 599 8204 55 17 1 chr20 41640469 41641460 -30512422 - LTR13 LTR ERVK 0 1007 1 1659 292 131 88 chr20 41641460 41641695 -30512187 - ERVL LTR ERVL -5165 599 376 2136 114 0 0 chr20 41642103 41642393 -30511489 + AluSg SINE Alu 1 290 -20 447 160 126 42 chr20 41643075 41643194 -30510688 + FLAM_C SINE Alu 5 133 0 2031 93 33 23 chr20 41643198 41643500 -30510382 + AluSg SINE Alu 1 305 -5 2076 105 0 7 chr20 41643503 41643824 -30510058 + AluSx SINE Alu 1 319 0 323 257 20 0 chr20 41644071 41644172 -30509710 - MLT2F LTR ERVL -323 340 238 1736 203 24 48 chr20 41644228 41644319 -30509563 + MLT1A1 LTR MaLR 1 93 -272 2315 96 0 6 chr20 41644319 41644633 -30509249 + AluSx SINE Alu 1 312 0 1736 203 24 48 chr20 41644633 41644915 -30508967 + MLT1A1 LTR MaLR 93 365 0 700 186 22 16 chr20 41644919 41645102 -30508780 - L1MEc LINE L1 -1550 4665 4482 2044 114 0 3 chr20 41645102 41645391 -30508491 - AluSx SINE Alu -3 309 22 2254 102 3 0 chr20 41645417 41645720 -30508162 + AluSg SINE Alu 1 304 -6 1602 168 9 40 chr20 41645725 41646046 -30507836 + AluJo SINE Alu 1 311 -1 2492 257 60 48 chr20 41646048 41646460 -30507422 - L1MEc LINE L1 -2412 3803 3398 1689 183 7 7 chr20 41646460 41646760 -30507122 - AluJb SINE Alu -8 304 5 2492 257 60 48 chr20 41646760 41646895 -30506987 - L1MEc LINE L1 -2817 3398 3266 2326 82 0 7 chr20 41646895 41647201 -30506681 - AluSx SINE Alu -8 304 1 2492 257 60 48 chr20 41647201 41647783 -30506099 - L1MEc LINE L1 -2949 3266 2659 2022 123 0 43 chr20 41647784 41648108 -30505774 - AluSx SINE Alu 0 312 3 2138 98 3 7 chr20 41648110 41648407 -30505475 - AluSg SINE Alu -14 296 1 2142 116 0 0 chr20 41648417 41648742 -30505140 - AluSx SINE Alu 0 325 1 303 273 157 0 chr20 41648743 41648864 -30505018 - L1MEc LINE L1 -3657 2558 2419 596 247 124 41 chr20 41648903 41649024 -30504858 - L1MEc LINE L1 -3926 2470 2360 2148 65 0 4 chr20 41649024 41649303 -30504579 - AluY SINE Alu -33 278 1 596 247 124 41 chr20 41649303 41649472 -30504410 - L1MEc LINE L1 -4036 2360 2156 293 214 86 0 chr20 41649493 41649563 -30504319 - AluJ/FRAM SINE Alu -3 299 224 387 268 27 0 chr20 41649582 41649694 -30504188 - L1MEc LINE L1 -4265 2131 2017 * 1011 288 77 73 chr20 41649687 41649872 -30504010 - L1MEc LINE L1 -4613 1783 1600 1740 167 43 58 chr20 41649872 41650023 -30503859 + MER2 DNA MER2_type 1 153 -191 1656 168 0 27 chr20 41650023 41650315 -30503567 + AluJo SINE Alu 4 287 -25 1740 167 43 58 chr20 41650315 41650510 -30503372 + MER2 DNA MER2_type 153 342 -2 1011 288 77 73 chr20 41650510 41650611 -30503271 - L1MEc LINE L1 -4796 1600 1501 1979 113 0 13 chr20 41650611 41650912 -30502970 - AluSc SINE Alu -12 297 1 1011 288 77 73 chr20 41650912 41650952 -30502930 - L1MEc LINE L1 -4895 1501 1463 207 0 0 0 chr20 41650952 41650975 -30502907 + (TG)n Simple_repeat Simple_repeat 2 24 0 1011 288 77 73 chr20 41650975 41651017 -30502865 - L1MEc LINE L1 -4933 1463 1423 2049 136 3 3 chr20 41651017 41651325 -30502557 + AluSx SINE Alu 1 308 -4 1011 288 77 73 chr20 41651325 41651436 -30502446 - L1MEc LINE L1 -4973 1423 1314 2177 115 0 3 chr20 41651436 41651748 -30502134 - AluSx SINE Alu 0 312 2 1011 288 77 73 chr20 41651748 41651962 -30501920 - L1MEc LINE L1 -5082 1314 1083 398 214 107 0 chr20 41652248 41652360 -30501522 + L1MB8 LINE L1 5895 6018 -160 2369 71 0 0 chr20 41652435 41652731 -30501151 - AluSg SINE Alu -14 296 1 216 169 11 34 chr20 41653056 41653145 -30500737 + G-rich Low_complexity Low_complexity 3 89 0 209 162 40 40 chr20 41653263 41653337 -30500545 + (CCGCG)n Simple_repeat Simple_repeat 1 74 0 28 105 0 0 chr20 41653342 41653447 -30500435 + GC_rich Low_complexity Low_complexity 1 105 0 33 73 0 0 chr20 41653583 41653651 -30500231 + GC_rich Low_complexity Low_complexity 1 68 0 38 51 0 0 chr20 41653919 41653978 -30499904 + GC_rich Low_complexity Low_complexity 1 59 0 222 232 54 0 chr20 41654003 41654059 -30499823 + (CTGGGG)n Simple_repeat Simple_repeat 6 64 0 1813 143 43 3 chr20 41655000 41655300 -30498582 + AluSx SINE Alu 1 312 0 1489 251 136 2 chr20 41657753 41658238 -30495644 - MER68 LTR ERV1 0 562 13 2402 55 0 7 chr20 41658279 41658586 -30495296 - AluY SINE Alu -6 305 1 2304 89 0 13 chr20 41658727 41659040 -30494842 - AluSg SINE Alu -1 309 1 219 36 0 0 chr20 41659211 41659239 -30494643 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 2115 92 3 0 chr20 41659241 41659523 -30494359 - AluSp SINE Alu -29 284 2 1356 177 62 17 chr20 41659563 41659851 -30494031 + AluJo SINE Alu 1 301 -11 238 328 0 0 chr20 41659946 41660007 -30493875 - L2 LINE L2 -3 3269 3209 221 433 0 0 chr20 41660033 41660137 -30493745 + MIR SINE MIR 159 262 0 1812 130 3 59 chr20 41661358 41661681 -30492201 + AluJb SINE Alu 1 305 -7 2012 95 21 3 chr20 41662904 41663188 -30490694 + AluSx SINE Alu 1 289 -23 360 191 0 85 chr20 41664996 41665017 -30488865 - AluJo SINE Alu -151 151 130 1741 154 21 0 chr20 41665017 41665332 -30488550 - AluJb SINE Alu 0 321 1 360 191 0 85 chr20 41665332 41665403 -30488479 - AluJo SINE Alu -172 130 66 348 104 0 0 chr20 41665380 41665428 -30488454 - Alu SINE Alu -255 48 1 * 292 316 66 0 chr20 41665471 41665623 -30488259 - L1MC4 LINE L1 -369 7673 7512 490 268 92 4 chr20 41665646 41665834 -30488048 - L1MD3 LINE L1 -5 8037 7834 1918 118 21 7 chr20 41665834 41666122 -30487760 - AluSx SINE Alu -20 292 1 995 92 15 0 chr20 41666122 41666253 -30487629 - AluSg SINE Alu -177 133 1 2080 92 10 3 chr20 41666258 41666550 -30487332 - AluSx SINE Alu -18 294 1 218 311 113 23 chr20 41666928 41667105 -30486777 + L2 LINE L2 1668 1860 -1454 1218 78 0 0 chr20 41667127 41667281 -30486601 - AluSx SINE Alu -158 154 1 426 274 109 84 chr20 41667548 41667809 -30486073 - L1M4 LINE L1 -2954 3192 2918 2096 101 14 0 chr20 41667809 41668106 -30485776 - AluSp SINE Alu -12 301 1 426 274 109 84 chr20 41668106 41668212 -30485670 - L1M4 LINE L1 -3228 2918 2816 855 180 17 39 chr20 41668212 41668390 -30485492 - FRAM SINE Alu 0 40 1 2107 120 0 3 chr20 41669586 41669885 -30483997 + AluSq SINE Alu 1 298 -15 2170 97 0 55 chr20 41670113 41670443 -30483439 + AluSx SINE Alu 1 312 0 487 165 32 46 chr20 41670443 41670601 -30483281 + AluJb SINE Alu 120 308 -4 3616 198 64 16 chr20 41670601 41671419 -30482463 + L1MB4 LINE L1 5323 6179 -1 538 277 113 30 chr20 41671545 41671917 -30481965 - L1MC5 LINE L1 -143 7818 7416 2177 105 0 3 chr20 41672234 41672529 -30481353 - AluSq SINE Alu -19 294 1 252 163 0 150 chr20 41675197 41675357 -30478525 + G-rich Low_complexity Low_complexity 18 153 0 2157 83 3 23 chr20 41675766 41676066 -30477816 - AluSx SINE Alu -18 294 1 892 287 52 0 chr20 41676511 41676839 -30477043 + MER7A DNA MER2_type 1 346 0 1052 99 7 0 chr20 41677032 41677174 -30476708 - AluSq/x SINE Alu -170 143 1 2330 91 0 0 chr20 41677184 41677482 -30476400 - AluSg SINE Alu -12 298 1 1028 266 94 6 chr20 41679490 41679835 -30474047 + MSTD LTR MaLR 19 396 0 2248 84 10 0 chr20 41680070 41680367 -30473515 + AluSg SINE Alu 1 300 -10 2057 99 16 35 chr20 41680699 41680835 -30473047 + AluSq SINE Alu 1 138 -175 2160 93 19 19 chr20 41680835 41681147 -30472735 + AluSx SINE Alu 1 312 0 2057 99 16 35 chr20 41681147 41681306 -30472576 + AluSq SINE Alu 138 292 -21 2400 60 3 13 chr20 41681306 41681620 -30472262 + AluY SINE Alu 1 311 0 2057 99 16 35 chr20 41681620 41681635 -30472247 + AluSq SINE Alu 292 306 -7 375 170 0 78 chr20 41684201 41684342 -30469540 + (TTGGGG)n Simple_repeat Simple_repeat 1 130 0 1652 188 7 3 chr20 41691650 41691954 -30461928 - AluJo SINE Alu -7 305 1 27 29 0 0 chr20 41697397 41697431 -30456451 + GC_rich Low_complexity Low_complexity 1 34 0 206 146 24 0 chr20 41697973 41698014 -30455868 + (CGGG)n Simple_repeat Simple_repeat 2 43 0 21 36 0 0 chr20 41698093 41698121 -30455761 + GC_rich Low_complexity Low_complexity 1 28 0 225 214 18 0 chr20 41699035 41699091 -30454791 + AluJo SINE Alu 86 142 -160 1096 191 5 0 chr20 41699091 41699300 -30454582 + AluJb SINE Alu 80 289 -23 189 0 0 0 chr20 41703648 41703669 -30450213 + (CAGA)n Simple_repeat Simple_repeat 2 22 0 1531 135 123 15 chr20 41703669 41703929 -30449953 - AluSg SINE Alu -22 288 1 419 252 54 14 chr20 41705912 41706005 -30447877 - MER58 DNA MER1_type -124 217 114 2419 80 0 10 chr20 41706005 41706317 -30447565 - AluSg SINE Alu -1 309 1 419 252 54 14 chr20 41706317 41706370 -30447512 - MER58 DNA MER1_type -227 114 65 338 234 0 0 chr20 41706404 41706481 -30447401 + MER58A DNA MER1_type 134 210 -14 1460 144 17 4 chr20 41708512 41708748 -30445134 - AluSq SINE Alu -74 239 1 360 77 0 0 chr20 41709564 41709616 -30444266 + (CCCCAG)n Simple_repeat Simple_repeat 3 54 0 21 0 0 0 chr20 41709924 41709945 -30443937 + GC_rich Low_complexity Low_complexity 1 21 0 180 143 0 0 chr20 41710078 41710120 -30443762 + (TCC)n Simple_repeat Simple_repeat 1 42 0 200 322 23 0 chr20 41710153 41710240 -30443642 + G-rich Low_complexity Low_complexity 5 93 0 341 279 82 39 chr20 41710739 41710947 -30442935 - MLT1E LTR MaLR -281 312 96 203 0 37 0 chr20 41712043 41712070 -30441812 + (TG)n Simple_repeat Simple_repeat 1 28 0 450 36 0 0 chr20 41712243 41712299 -30441583 + (CA)n Simple_repeat Simple_repeat 1 56 0 187 265 20 0 chr20 41717302 41717351 -30436531 + L2 LINE L2 2708 2757 -557 277 298 12 18 chr20 41717935 41718103 -30435779 + (GGGTG)n Simple_repeat Simple_repeat 3 169 0 * 345 218 11 73 chr20 41718082 41718261 -30435621 + G-rich Low_complexity Low_complexity 3 170 0 24 53 0 0 chr20 41718272 41718310 -30435572 + GC_rich Low_complexity Low_complexity 1 38 0 847 213 32 0 chr20 41718722 41718942 -30434940 + L1MB7 LINE L1 5144 5373 -785 2289 45 31 7 chr20 41718942 41719234 -30434648 + AluSq SINE Alu 1 299 -14 847 213 32 0 chr20 41719234 41719245 -30434637 + L1MB7 LINE L1 5373 5382 -776 724 239 99 35 chr20 41719665 41719820 -30434062 + L1MB7 LINE L1 5874 6018 -166 2167 94 10 0 chr20 41719820 41720118 -30433764 - AluSx SINE Alu -11 301 1 724 239 99 35 chr20 41720118 41720246 -30433636 + L1MB7 LINE L1 6018 6175 -9 314 197 8 51 chr20 41720481 41720598 -30433284 + (CGGGG)n Simple_repeat Simple_repeat 5 116 0 262 197 15 45 chr20 41720649 41720715 -30433167 + C-rich Low_complexity Low_complexity 6 69 0 320 323 44 6 chr20 41720802 41720960 -30432922 + MIR SINE MIR 22 185 -77 257 322 124 30 chr20 41721640 41721842 -30432040 - MIR SINE MIR -27 235 15 281 341 25 84 chr20 41721926 41722249 -30431633 + L2 LINE L2 2962 3265 -7 544 117 21 0 chr20 41723714 41723808 -30430074 + MER53 DNA DNA 1 96 -93 360 0 0 0 chr20 41723808 41723848 -30430034 + (TA)n Simple_repeat Simple_repeat 2 41 0 222 150 0 0 chr20 41723970 41724010 -30429872 + (TATAA)n Simple_repeat Simple_repeat 2 41 0 242 170 19 0 chr20 41724086 41724139 -30429743 - MER53 DNA DNA -128 61 8 294 282 0 0 chr20 41724562 41724633 -30429249 + MER5A DNA MER1_type 5 75 -114 232 277 9 9 chr20 41724717 41724829 -30429053 + (CA)n Simple_repeat Simple_repeat 2 113 0 1366 189 0 26 chr20 41725146 41725411 -30428471 + AluJo SINE Alu 25 307 0 193 40 0 0 chr20 41725411 41725436 -30428446 + (CAAA)n Simple_repeat Simple_repeat 2 172 0 315 333 138 5 chr20 41725574 41725763 -30428119 - MIR SINE MIR -26 236 23 2784 110 0 3 chr20 41727349 41727723 -30426159 - THE1C LTR MaLR 0 375 3 254 229 10 52 chr20 41729536 41729632 -30424250 + (CACCC)n Simple_repeat Simple_repeat 4 95 0 237 184 0 51 chr20 41729644 41729742 -30424140 + (CACCC)n Simple_repeat Simple_repeat 3 95 0 2154 120 0 10 chr20 41730834 41731142 -30422740 - AluSx SINE Alu -6 306 2 1361 266 70 25 chr20 41731699 41732217 -30421665 - MLT1E2 LTR MaLR -7 619 79 1926 116 45 63 chr20 41732390 41732716 -30421166 - MER51A LTR ERV1 0 634 304 2033 125 0 20 chr20 41732716 41733020 -30420862 + AluSx SINE Alu 1 298 -14 238 67 44 0 chr20 41733023 41733068 -30420814 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 1926 116 45 63 chr20 41733068 41733287 -30420595 - MER51A LTR ERV1 -332 302 1 2049 95 11 3 chr20 41733466 41733750 -30420132 - AluSg1 SINE Alu -23 286 1 2742 245 46 23 chr20 41734356 41734919 -30418963 - MER67C LTR ERV1 0 710 127 2100 99 13 3 chr20 41734919 41735221 -30418661 + AluSc SINE Alu 1 305 -4 2742 245 46 23 chr20 41735221 41735351 -30418531 - MER67C LTR ERV1 -583 127 1 239 176 0 39 chr20 41736357 41736408 -30417474 + L2 LINE L2 3219 3267 -5 324 329 42 6 chr20 41737672 41737839 -30416043 + (TCCCG)n Simple_repeat Simple_repeat 3 175 0 * 372 251 16 49 chr20 41737715 41737898 -30415984 + CT-rich Low_complexity Low_complexity 1 177 0 255 168 76 0 chr20 41737927 41738046 -30415836 + (TCCTG)n Simple_repeat Simple_repeat 3 130 0 372 277 108 19 chr20 41738120 41738333 -30415549 + LTR16A LTR ERVL 202 433 -17 613 200 157 5 chr20 41739121 41739331 -30414551 + MLT1D LTR MaLR 107 348 -157 245 246 33 0 chr20 41739338 41739399 -30414483 + MER91B DNA MER1_type 1 63 -127 324 235 41 10 chr20 41741630 41741728 -30412154 + L1MC/D LINE L1 5534 5634 -2174 490 95 0 0 chr20 41742333 41742407 -30411475 - Alu SINE Alu 0 311 238 228 313 0 0 chr20 41742535 41742602 -30411280 - LTR16A LTR ERVL -296 154 88 273 292 35 0 chr20 41744082 41744176 -30409706 + MIR SINE MIR 51 138 -70 340 327 7 4 chr20 41745638 41745927 -30407955 + (TG)n Simple_repeat Simple_repeat 1 290 0 306 73 0 0 chr20 41746698 41746739 -30407143 + (TGGA)n Simple_repeat Simple_repeat 3 43 0 389 322 41 0 chr20 41746753 41746899 -30406983 - MER5A DNA MER1_type -2 187 36 1032 108 11 11 chr20 41747284 41747460 -30406422 + (TTTC)n Simple_repeat Simple_repeat 4 179 0 2185 119 6 3 chr20 41747460 41747920 -30405962 - AluSq SINE Alu 0 461 1 208 239 15 15 chr20 41748294 41748361 -30405521 + GA-rich Low_complexity Low_complexity 1 67 0 234 245 28 56 chr20 41749671 41749814 -30404068 + GA-rich Low_complexity Low_complexity 3 141 0 203 222 0 37 chr20 41751938 41751992 -30401890 - MIR SINE MIR -64 144 93 201 244 0 0 chr20 41752167 41752212 -30401670 + (TGAG)n Simple_repeat Simple_repeat 4 48 0 193 260 188 0 chr20 41752742 41752838 -30401044 - MIR SINE MIR -128 134 21 234 188 14 110 chr20 41753223 41753310 -30400572 - MIR SINE MIR -61 147 86 2441 44 0 3 chr20 41755219 41755512 -30398370 - AluY SINE Alu -15 296 5 277 347 55 18 chr20 41755631 41755850 -30398032 - L3 LINE CR1 -40 1537 1311 572 272 40 0 chr20 41755903 41756076 -30397806 + MER68 LTR ERV1 1 180 -382 402 219 110 105 chr20 41756111 41756321 -30397561 + MER68 LTR ERV1 351 603 -2 3125 202 64 9 chr20 41757321 41758249 -30395633 + L1M3 LINE L1 4509 5485 -698 203 238 172 8 chr20 41758665 41758787 -30395095 + L2 LINE L2 2910 3051 -262 693 144 11 17 chr20 41759048 41759228 -30394654 + GA-rich Low_complexity Low_complexity 2 180 0 749 127 21 0 chr20 41759259 41759498 -30394384 + GA-rich Low_complexity Low_complexity 1 244 0 680 136 23 0 chr20 41759499 41759675 -30394207 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 213 194 0 0 chr20 41759675 41759711 -30394171 + polypurine Low_complexity Low_complexity 1 36 0 216 111 0 0 chr20 41759716 41759752 -30394130 + (GGGA)n Simple_repeat Simple_repeat 2 37 0 716 173 6 0 chr20 41759771 41759950 -30393932 + GA-rich Low_complexity Low_complexity 1 180 0 390 312 133 48 chr20 41763266 41763641 -30390241 + MLT1K LTR MaLR 149 555 -33 21 36 0 0 chr20 41763750 41763778 -30390104 + AT_rich Low_complexity Low_complexity 1 28 0 350 100 0 0 chr20 41763782 41763832 -30390050 - L1MA9 LINE L1 0 6312 6263 1747 170 0 7 chr20 41763832 41764121 -30389761 + AluJo SINE Alu 1 287 -25 291 292 83 18 chr20 41764164 41764332 -30389550 - L2 LINE L2 -1100 2214 2036 1707 123 8 4 chr20 41764430 41764691 -30389191 - AluJo SINE Alu -9 303 42 37 52 0 0 chr20 41765250 41765308 -30388574 + GC_rich Low_complexity Low_complexity 1 58 0 302 121 0 17 chr20 41765418 41765476 -30388406 + (CGGGGG)n Simple_repeat Simple_repeat 2 58 0 22 35 0 0 chr20 41766147 41766176 -30387706 + GC_rich Low_complexity Low_complexity 1 29 0 327 229 211 0 chr20 41766503 41766612 -30387270 + Charlie2a DNA MER1_type 1522 1653 -1209 2208 83 7 0 chr20 41766685 41766985 -30386897 - AluSg SINE Alu -8 302 1 2090 113 7 7 chr20 41766987 41767297 -30386585 - AluSq SINE Alu -3 310 1 844 117 0 29 chr20 41767301 41767438 -30386444 - FLAM_C SINE Alu 0 133 1 272 342 107 34 chr20 41767572 41768114 -30385768 + L2 LINE L2 2479 3113 -159 370 289 132 49 chr20 41769027 41769397 -30384485 - L2 LINE L2 -836 2478 2078 1414 180 24 4 chr20 41769723 41769973 -30383909 - AluJb SINE Alu -49 263 9 2231 101 7 0 chr20 41770332 41770638 -30383244 - AluSp SINE Alu -5 308 1 24 0 0 0 chr20 41770840 41770864 -30383018 + AT_rich Low_complexity Low_complexity 1 24 0 24 53 0 0 chr20 41771113 41771151 -30382731 + AT_rich Low_complexity Low_complexity 1 38 0 752 161 8 0 chr20 41771240 41771358 -30382524 - AluJb SINE Alu -193 119 1 663 180 25 8 chr20 41771399 41771521 -30382361 + FLAM_C SINE Alu 6 129 -14 1786 142 30 7 chr20 41772334 41772629 -30381253 + AluJb SINE Alu 1 302 -10 1791 71 139 29 chr20 41773336 41773616 -30380266 - AluSx SINE Alu 0 312 2 24 0 0 0 chr20 41777025 41777049 -30376833 + GC_rich Low_complexity Low_complexity 1 24 0 240 35 0 0 chr20 41777293 41777322 -30376560 + (CGGG)n Simple_repeat Simple_repeat 4 32 0 196 250 97 14 chr20 41778287 41778359 -30375523 - L2 LINE L2 -52 3220 3143 2060 111 17 3 chr20 41780095 41780392 -30373490 + AluSx SINE Alu 1 301 -11 743 187 0 52 chr20 41780392 41780547 -30373335 + AluJo/FRAM SINE Alu 134 280 -32 303 175 0 0 chr20 41781292 41781349 -30372533 + (TG)n Simple_repeat Simple_repeat 2 58 0 269 276 23 0 chr20 41781358 41781445 -30372437 + L1MC4 LINE L1 6615 6703 -1339 253 168 17 50 chr20 41781458 41781577 -30372305 + (TA)n Simple_repeat Simple_repeat 2 116 0 300 209 61 87 chr20 41781577 41781692 -30372190 + L1MC4 LINE L1 6593 6704 -1338 1005 125 24 30 chr20 41781768 41781936 -30371946 + AluJb SINE Alu 135 301 -11 833 254 188 22 chr20 41782212 41782373 -30371509 - Charlie1b DNA MER1_type -2238 523 390 2119 100 7 7 chr20 41782373 41782672 -30371210 + AluSx SINE Alu 1 299 -13 833 254 188 22 chr20 41782672 41782958 -30370924 - Charlie1b DNA MER1_type -2371 390 2 2168 85 31 3 chr20 41784010 41784303 -30369579 - AluSq SINE Alu -12 301 1 610 203 24 16 chr20 41785134 41785257 -30368625 + AluJb SINE Alu 136 259 -53 2514 254 135 23 chr20 41785610 41786238 -30367644 + Charlie1a DNA MER1_type 4 561 -2200 1506 135 0 80 chr20 41786238 41786527 -30367355 + AluJb SINE Alu 1 266 -46 2514 254 135 23 chr20 41786527 41787146 -30366736 + Charlie1a DNA MER1_type 561 1453 -2 1520 188 7 26 chr20 41787776 41788085 -30365797 + AluJo SINE Alu 1 303 -9 538 176 118 66 chr20 41788238 41788374 -30365508 - AluJb SINE Alu -167 145 3 343 265 0 0 chr20 41789507 41789575 -30364307 - MER2 DNA MER2_type -9 336 269 21 36 0 0 chr20 41789594 41789622 -30364260 + AT_rich Low_complexity Low_complexity 1 28 0 277 161 18 0 chr20 41789651 41789707 -30364175 - MER2 DNA MER2_type -192 153 97 2190 107 16 0 chr20 41790511 41790819 -30363063 - AluSq SINE Alu 0 313 1 356 57 0 0 chr20 41791090 41791143 -30362739 + AluSc SINE Alu 246 298 -1 424 229 189 40 chr20 41791181 41791408 -30362474 - MLT1H1 LTR MaLR 0 555 295 838 121 0 0 chr20 41792547 41792671 -30361211 + AluSg/x SINE Alu 179 302 -8 559 245 71 49 chr20 41793110 41793294 -30360588 + MER20 DNA MER1_type 25 212 -7 216 226 0 0 chr20 41796951 41797013 -30356869 + (CA)n Simple_repeat Simple_repeat 2 63 0 548 268 91 42 chr20 41800142 41800407 -30353475 - LTR16C LTR ERVL -17 474 197 401 302 84 6 chr20 41802548 41802727 -30351155 + L2 LINE L2 1611 1803 -1511 1404 198 127 12 chr20 41802798 41803207 -30350675 - MLT1C LTR MaLR -6 461 6 5455 166 42 10 chr20 41803451 41805001 -30348881 + L1MB3 LINE L1 1464 3060 -3322 5439 199 38 10 chr20 41804986 41806305 -30347577 + L1MB3 LINE L1 3930 5285 -1097 * 2126 155 53 27 chr20 41806318 41806731 -30347151 + MSTB1 LTR MaLR 9 432 0 4153 181 54 23 chr20 41806731 41806867 -30347015 + L1MB3 LINE L1 5283 5413 -1006 1570 158 39 21 chr20 41806867 41807152 -30346730 - AluJo SINE Alu -22 290 1 4153 181 54 23 chr20 41807152 41808115 -30345767 + L1MB3 LINE L1 5413 6409 -10 347 248 101 9 chr20 41808136 41808245 -30345637 + MLT1G1 LTR MaLR 214 332 -263 286 289 70 26 chr20 41808276 41808390 -30345492 + MLT1G1 LTR MaLR 438 556 -39 1650 183 0 7 chr20 41808491 41808797 -30345085 - AluJb SINE Alu -8 304 1 22 88 0 0 chr20 41810674 41810731 -30343151 + GC_rich Low_complexity Low_complexity 1 57 0 243 280 0 59 chr20 41810894 41811080 -30342802 + G-rich Low_complexity Low_complexity 5 179 0 850 131 15 0 chr20 41812352 41812482 -30341400 + FLAM_C SINE Alu 1 132 -1 201 74 0 0 chr20 41812487 41812514 -30341368 + (GAAAA)n Simple_repeat Simple_repeat 3 29 0 1961 123 16 16 chr20 41813536 41813845 -30340037 + AluSx SINE Alu 1 309 -3 234 219 0 0 chr20 41814856 41814920 -30338962 + (TGAA)n Simple_repeat Simple_repeat 4 67 0 4110 205 45 8 chr20 41818879 41819415 -30334467 + L1MB3 LINE L1 5058 5573 -610 2015 111 0 0 chr20 41819415 41819738 -30334144 + AluSg SINE Alu 1 323 0 4110 205 45 8 chr20 41819738 41820293 -30333589 + L1MB3 LINE L1 5573 6183 0 442 45 0 124 chr20 41820869 41821071 -30332811 + (CAGGA)n Simple_repeat Simple_repeat 4 180 0 506 32 0 116 chr20 41821093 41821283 -30332599 + (CAGGA)n Simple_repeat Simple_repeat 5 172 0 185 16 0 115 chr20 41821296 41821357 -30332525 + (CAGGA)n Simple_repeat Simple_repeat 3 56 0 417 71 0 107 chr20 41821371 41821567 -30332315 + (CAGGA)n Simple_repeat Simple_repeat 3 177 0 492 63 0 105 chr20 41821670 41821928 -30331954 + (CAGGA)n Simple_repeat Simple_repeat 1 230 0 1736 154 3 7 chr20 41823346 41823660 -30330222 + AluSx SINE Alu 1 313 0 374 230 0 35 chr20 41825060 41825234 -30328648 + (TGAG)n Simple_repeat Simple_repeat 2 169 0 711 215 22 4 chr20 41825235 41826109 -30327773 + (TGAA)n Simple_repeat Simple_repeat 1 890 0 1029 245 54 24 chr20 41828473 41828845 -30325037 + MLT1C LTR MaLR 53 435 -32 181 338 15 0 chr20 41829515 41829583 -30324299 + L2 LINE L2 3191 3259 -13 319 188 94 10 chr20 41829767 41829863 -30324019 - LTR33 LTR ERVL -379 142 39 206 176 39 0 chr20 41830485 41830536 -30323346 + CT-rich Low_complexity Low_complexity 3 55 0 1300 67 11 4 chr20 41833717 41833986 -30319896 + (GGA)n Simple_repeat Simple_repeat 1 271 0 1383 251 180 0 chr20 41834613 41835103 -30318779 + MER77 LTR ERV1 2 579 -26 343 343 77 36 chr20 41835573 41835821 -30318061 + L1ME3A LINE L1 5656 5913 -257 1197 210 42 93 chr20 41836663 41837048 -30316834 - MLT1A1 LTR MaLR 0 365 1 3693 271 67 25 chr20 41840256 41841195 -30312687 + L1M4 LINE L1 2076 2974 -3408 2067 136 0 13 chr20 41841195 41841503 -30312379 + AluSx SINE Alu 1 304 -8 3693 271 67 25 chr20 41841503 41842418 -30311464 + L1M4 LINE L1 2974 4014 -2368 * 5002 203 36 30 chr20 41842406 41843511 -30310371 + L1MB4 LINE L1 4241 5337 -1079 2154 119 0 0 chr20 41843511 41843806 -30310076 + AluSx SINE Alu 1 295 -17 5002 203 36 30 chr20 41843806 41843892 -30309990 + L1MB4 LINE L1 5337 5421 -995 2557 52 0 0 chr20 41843892 41844202 -30309680 + AluY SINE Alu 1 310 -1 5002 203 36 30 chr20 41844202 41844472 -30309410 + L1MB4 LINE L1 5421 5705 -711 1320 127 5 0 chr20 41844473 41844670 -30309212 + AluSg/x SINE Alu 114 311 -1 1261 262 55 0 chr20 41844670 41845036 -30308846 + L1MB4 LINE L1 5729 6114 -302 1015 228 54 0 chr20 41845203 41845462 -30308420 + L1MB4 LINE L1 6090 6362 -54 914 166 51 0 chr20 41845498 41845655 -30308227 - AluJb SINE Alu -14 298 134 1319 289 46 77 chr20 41845655 41846487 -30307395 + L1M4 LINE L1 3996 4801 -1581 243 232 16 72 chr20 41847200 41847325 -30306557 + (CCCTG)n Simple_repeat Simple_repeat 2 119 0 584 262 92 34 chr20 41849590 41850119 -30303763 - MER45B DNA AcHobo -25 1015 364 429 276 39 0 chr20 41850174 41850301 -30303581 - MER45B DNA AcHobo -858 182 51 2415 66 7 0 chr20 41851806 41852109 -30301773 - AluSp SINE Alu -8 305 1 289 274 8 0 chr20 41854907 41855024 -30298858 + C-rich Low_complexity Low_complexity 2 119 0 312 301 111 4 chr20 41855334 41855571 -30298311 + L1MB8 LINE L1 5893 6167 -10 295 287 148 0 chr20 41855759 41855874 -30298008 + MER45A DNA AcHobo 47 178 0 958 217 62 27 chr20 41856362 41856734 -30297148 + MLT1C LTR MaLR 3 457 -10 200 317 58 19 chr20 41859568 41859672 -30294210 + L2 LINE L2 2991 3098 -174 350 272 97 61 chr20 41859971 41860199 -30293683 + MLT1K LTR MaLR 330 565 -23 226 178 22 0 chr20 41860175 41860220 -30293662 - MLT1K LTR MaLR -4 584 539 * 2027 289 161 10 chr20 41861721 41862711 -30291171 + L1MEc LINE L1 80 919 -5477 1906 141 7 7 chr20 41862711 41863010 -30290872 + AluSx SINE Alu 1 299 -13 2027 289 161 10 chr20 41863010 41863530 -30290352 + L1MEc LINE L1 919 1818 -4578 828 116 39 0 chr20 41863543 41863672 -30290210 + AluJb SINE Alu 1 134 -178 414 189 33 57 chr20 41863676 41863798 -30290084 + L1MEc LINE L1 1827 1945 -4451 234 169 46 0 chr20 41863802 41863867 -30290015 + (CGGG)n Simple_repeat Simple_repeat 4 71 0 2216 107 13 0 chr20 41863981 41864289 -30289593 + AluSx SINE Alu 1 312 0 216 97 0 0 chr20 41864293 41864324 -30289558 + (GGAA)n Simple_repeat Simple_repeat 3 33 0 302 289 51 39 chr20 41864425 41864581 -30289301 + L1M4 LINE L1 4415 4572 -1574 318 304 63 0 chr20 41866357 41866515 -30287367 + Tigger5 DNA MER2_type 2151 2318 -5 339 286 78 26 chr20 41866562 41866754 -30287128 - MLT1H1 LTR MaLR 0 555 354 206 247 0 11 chr20 41866992 41867081 -30286801 + (CGGGG)n Simple_repeat Simple_repeat 1 88 0 313 335 120 14 chr20 41867167 41867376 -30286506 - L1M2a LINE L1 -5929 1239 1009 443 311 209 6 chr20 41868307 41868622 -30285260 - L2 LINE L2 -883 2431 2053 231 88 0 0 chr20 41869112 41869146 -30284736 + L1MCa LINE L1 248 281 -6145 680 317 70 25 chr20 41869162 41869846 -30284036 + L1MCa LINE L1 840 1554 -4862 * 2183 207 83 5 chr20 41869837 41870401 -30283481 + L1MCa LINE L1 4 611 -5815 2293 98 3 0 chr20 41870475 41870780 -30283102 + AluSx SINE Alu 5 310 -2 1514 104 4 17 chr20 41870780 41871021 -30282861 - PRIMA41-int LTR ERV1 -231 7525 7288 6879 88 1 1 chr20 41871026 41872003 -30281879 - PRIMA41-int LTR ERV1 -1286 6470 5494 2540 43 0 0 chr20 41872003 41872306 -30281576 + AluY SINE Alu 9 311 0 454 239 10 0 chr20 41872306 41872444 -30281438 + L1MB3 LINE L1 5476 5598 -570 831 299 40 0 chr20 41872510 41872788 -30281094 + L1MB3 LINE L1 5879 6167 -16 278 175 53 0 chr20 41873398 41873455 -30280427 - MIR SINE MIR -117 145 86 188 67 33 0 chr20 41874056 41874086 -30279796 + (CCCCAG)n Simple_repeat Simple_repeat 5 35 0 23 33 0 0 chr20 41875833 41875863 -30278019 + GC_rich Low_complexity Low_complexity 1 30 0 191 61 30 0 chr20 41875893 41875926 -30277956 + (CCGCG)n Simple_repeat Simple_repeat 1 34 0 231 195 0 0 chr20 41876114 41876155 -30277727 + GA-rich Low_complexity Low_complexity 1 41 0 267 282 13 26 chr20 41876503 41876659 -30277223 + (CGG)n Simple_repeat Simple_repeat 2 155 0 24 53 0 0 chr20 41878613 41878651 -30275231 + AT_rich Low_complexity Low_complexity 1 38 0 1856 125 7 21 chr20 41879401 41879715 -30274167 - AluSx SINE Alu 0 310 1 756 226 80 44 chr20 41879826 41880101 -30273781 - MER33 DNA MER1_type -13 311 27 225 108 0 0 chr20 41880299 41880336 -30273546 + (CTGGGG)n Simple_repeat Simple_repeat 3 39 0 1930 134 27 0 chr20 41880512 41880804 -30273078 - AluSg SINE Alu -10 300 1 2481 70 0 6 chr20 41881087 41881399 -30272483 - AluSg SINE Alu 0 310 1 190 154 0 39 chr20 41883944 41883996 -30269886 + C-rich Low_complexity Low_complexity 1 50 0 419 203 28 11 chr20 41884306 41884483 -30269399 + (TG)n Simple_repeat Simple_repeat 1 180 0 477 286 34 6 chr20 41884502 41884677 -30269205 + (TG)n Simple_repeat Simple_repeat 1 180 0 225 286 110 0 chr20 41885482 41885573 -30268309 - MER46C DNA MER2_type -204 134 34 2111 102 13 22 chr20 41885713 41886027 -30267855 + AluSx SINE Alu 1 311 -1 421 279 18 0 chr20 41887131 41887242 -30266640 - L1MB4 LINE L1 -25 6155 6043 380 293 237 0 chr20 41887261 41887493 -30266389 - L1ME1 LINE L1 -8 6158 5872 403 237 9 18 chr20 41889134 41889248 -30264634 - MER53 DNA DNA -76 113 1 244 223 15 62 chr20 41889248 41889378 -30264504 + C-rich Low_complexity Low_complexity 2 125 0 * 456 222 0 32 chr20 41889334 41889519 -30264363 + CT-rich Low_complexity Low_complexity 1 179 0 417 238 0 33 chr20 41889547 41889728 -30264154 + CT-rich Low_complexity Low_complexity 1 175 0 856 200 29 11 chr20 41889904 41890079 -30263803 - MER45A DNA AcHobo 0 178 1 1119 135 0 22 chr20 41890581 41890759 -30263123 + FRAM SINE Alu 1 174 -2 2135 152 105 5 chr20 41890769 41891158 -30262724 - MSTA LTR MaLR 0 428 1 545 254 90 11 chr20 41891668 41891845 -30262037 + MLT1C LTR MaLR 273 463 -4 3223 154 26 22 chr20 41893364 41893988 -30259894 - MER41B LTR ERV1 -8 627 2 364 200 120 0 chr20 41893988 41894088 -30259794 - MLT1F1 LTR MaLR -75 492 381 406 210 251 40 chr20 41894098 41894288 -30259594 - MLT1F1 LTR MaLR -95 447 298 2333 93 0 7 chr20 41894288 41894598 -30259284 - AluSx SINE Alu -4 308 1 406 210 251 40 chr20 41894598 41894715 -30259167 - MLT1F1 LTR MaLR -244 298 1 1980 128 0 10 chr20 41894756 41895087 -30258795 + AluSx SINE Alu 1 312 0 202 250 19 0 chr20 41895965 41896017 -30257865 + MIR SINE MIR 95 147 -61 338 296 0 28 chr20 41896333 41896475 -30257407 + (CCCG)n Simple_repeat Simple_repeat 2 139 0 * 362 251 22 49 chr20 41896406 41896589 -30257293 + (CCCA)n Simple_repeat Simple_repeat 1 178 0 280 366 66 9 chr20 41898910 41899123 -30254759 + L1MD2 LINE L1 5780 6004 -355 * 1108 228 43 0 chr20 41898945 41899248 -30254634 + L1MB5 LINE L1 5821 6136 -38 1018 105 98 0 chr20 41899249 41899402 -30254480 + AluJb SINE Alu 132 299 -13 189 239 333 11 chr20 41899612 41899792 -30254090 - L2 LINE L2 -184 3088 2851 222 171 0 0 chr20 41901662 41901703 -30252179 + G-rich Low_complexity Low_complexity 1 41 0 229 257 57 0 chr20 41905768 41905873 -30248009 - LTR16A LTR ERVL -107 343 233 1045 211 132 38 chr20 41906058 41906341 -30247541 + MLT1B LTR MaLR 1 323 -67 1785 156 23 13 chr20 41906341 41906649 -30247233 - AluJo SINE Alu -1 311 1 1045 211 132 38 chr20 41906649 41906706 -30247176 + MLT1B LTR MaLR 323 373 -17 517 167 194 36 chr20 41907769 41907979 -30245903 - MLT1G1 LTR MaLR -283 312 10 2356 53 0 0 chr20 41909067 41909373 -30244509 + AluY SINE Alu 1 306 0 279 395 0 6 chr20 41910630 41910797 -30243085 + (CACG)n Simple_repeat Simple_repeat 2 167 0 * 507 214 15 33 chr20 41910709 41911389 -30242493 + (CA)n Simple_repeat Simple_repeat 1 668 0 267 172 16 65 chr20 41911434 41911620 -30242262 + (CA)n Simple_repeat Simple_repeat 2 178 0 1461 171 112 4 chr20 41912813 41913082 -30240800 + AluJb SINE Alu 1 298 -14 2255 100 0 0 chr20 41913092 41913401 -30240481 + AluSx SINE Alu 1 309 -3 1647 214 42 7 chr20 41913429 41913835 -30240047 + L1MB3 LINE L1 5747 6166 -17 462 252 75 0 chr20 41914273 41914420 -30239462 + LTR37A LTR ERV1 217 374 -52 400 244 73 16 chr20 41914946 41915069 -30238813 + MER20 DNA MER1_type 33 162 -57 246 319 4 0 chr20 41924899 41925090 -30228792 + (CA)n Simple_repeat Simple_repeat 1 191 0 228 329 13 0 chr20 41925024 41925103 -30228779 + (CATA)n Simple_repeat Simple_repeat 3 82 0 * 326 302 4 11 chr20 41925131 41925410 -30228472 + (CACG)n Simple_repeat Simple_repeat 1 276 0 1675 165 14 10 chr20 41927439 41927557 -30226325 + AluJb SINE Alu 1 117 -195 222 62 0 0 chr20 41927557 41927589 -30226293 + (CAAAA)n Simple_repeat Simple_repeat 5 36 0 1675 165 14 10 chr20 41927589 41927605 -30226277 + AluJb SINE Alu 117 131 -181 2206 87 0 47 chr20 41927605 41927927 -30225955 + AluSg SINE Alu 1 307 -3 1675 165 14 10 chr20 41927927 41928082 -30225800 + AluJb SINE Alu 131 292 -20 181 209 0 47 chr20 41930671 41930714 -30223168 + MIR SINE MIR 126 166 -96 235 218 0 18 chr20 41931560 41931615 -30222267 - L2 LINE L2 -89 3224 3171 27 0 0 0 chr20 41937514 41937541 -30216341 + AT_rich Low_complexity Low_complexity 1 27 0 192 239 22 0 chr20 41938425 41938471 -30215411 - L2 LINE L2 -77 3195 3149 2040 117 31 0 chr20 41938924 41939214 -30214668 + AluSx SINE Alu 1 299 -13 1639 174 24 17 chr20 41940591 41940879 -30213003 - AluJb SINE Alu -22 290 1 331 344 28 38 chr20 41941782 41941994 -30211888 + L1ME2 LINE L1 5572 5781 -389 564 271 127 11 chr20 41942008 41942292 -30211590 - MER46C DNA MER2_type -16 322 6 356 242 71 20 chr20 41942295 41942394 -30211488 + L1ME2 LINE L1 5782 5885 -279 2502 40 0 0 chr20 41942402 41942699 -30211183 + AluY SINE Alu 1 297 -14 1387 79 0 0 chr20 41942699 41942877 -30211005 + AluY SINE Alu 133 310 -1 329 337 192 18 chr20 41943221 41943616 -30210266 - L2 LINE L2 -611 2703 2240 716 208 26 0 chr20 41943733 41943887 -30209995 + LTR26B LTR ERV1 374 531 0 1706 261 22 35 chr20 41943930 41944383 -30209499 - LTR2 LTR ERV1 0 449 3 340 286 35 14 chr20 41944435 41944575 -30209307 - MIR SINE MIR -28 234 91 573 315 51 22 chr20 41944663 41945001 -30208881 - LTR29 LTR ERV1 -127 517 127 267 311 4 15 chr20 41944991 41945141 -30208741 - LTR48B LTR ERV1 -410 132 31 2353 179 38 99 chr20 41945141 41945349 -30208533 + MER4D LTR ERV1 1 220 -683 1714 151 23 20 chr20 41945349 41945653 -30208229 + AluJb SINE Alu 1 305 -7 2353 179 38 99 chr20 41945653 41945788 -30208094 + MER4D LTR ERV1 220 362 -541 2133 100 10 3 chr20 41945788 41946088 -30207794 + AluSx SINE Alu 1 302 -10 2164 125 3 0 chr20 41946092 41946404 -30207478 + AluSp SINE Alu 1 313 0 2353 179 38 99 chr20 41946404 41946768 -30207114 + MER4D LTR ERV1 365 670 -233 1052 209 12 28 chr20 41946888 41947137 -30206745 + MER4E LTR ERV1 532 776 -3 211 279 9 9 chr20 41947541 41947652 -30206230 + GA-rich Low_complexity Low_complexity 2 112 0 1954 119 21 7 chr20 41948032 41948318 -30205564 + AluSq SINE Alu 1 290 -23 2393 79 3 0 chr20 41948323 41948627 -30205255 + AluSp SINE Alu 7 311 -2 2156 163 48 16 chr20 41948628 41949063 -30204819 + MER4C LTR ERV1 17 465 0 277 219 260 0 chr20 41950365 41950461 -30203421 - MER3 DNA MER1_type -4 205 85 354 284 142 0 chr20 41951027 41951182 -30202700 - MLT1K LTR MaLR -5 583 407 339 225 118 53 chr20 41951862 41952031 -30201851 + MER45C DNA AcHobo 85 264 -689 513 218 287 0 chr20 41952083 41952271 -30201611 + MER45C DNA AcHobo 684 925 -28 216 231 39 0 chr20 41953646 41953724 -30200158 + (CACTC)n Simple_repeat Simple_repeat 1 81 0 211 211 27 14 chr20 41953735 41953882 -30200000 + (CACTC)n Simple_repeat Simple_repeat 5 153 0 1176 207 169 43 chr20 41955618 41956033 -30197849 + MLT1C LTR MaLR 1 467 0 21 57 0 0 chr20 41957947 41957982 -30195900 + GC_rich Low_complexity Low_complexity 1 35 0 267 103 0 0 chr20 41958013 41958052 -30195830 + (CCG)n Simple_repeat Simple_repeat 2 40 0 41 26 0 51 chr20 41958115 41958193 -30195689 + GC_rich Low_complexity Low_complexity 1 74 0 24 0 0 0 chr20 41958231 41958255 -30195627 + GC_rich Low_complexity Low_complexity 1 24 0 22 35 0 0 chr20 41958319 41958348 -30195534 + GC_rich Low_complexity Low_complexity 1 29 0 1917 114 131 20 chr20 41959232 41959765 -30194117 + MER4A LTR ERV1 1 663 -1 577 248 83 69 chr20 41960691 41960726 -30193156 + MIR SINE MIR 29 62 -200 2104 121 0 0 chr20 41960726 41961016 -30192866 - AluSq SINE Alu -23 290 1 577 248 83 69 chr20 41961016 41961198 -30192684 + MIR SINE MIR 62 249 -13 914 195 56 37 chr20 41961226 41961441 -30192441 - MER20 DNA MER1_type 0 219 1 432 0 0 0 chr20 41962157 41962205 -30191677 + (TG)n Simple_repeat Simple_repeat 2 49 0 1672 174 10 14 chr20 41962206 41962494 -30191388 - AluJo SINE Alu -25 287 1 1781 175 3 3 chr20 41962692 41962984 -30190898 - AluJo SINE Alu -20 292 1 2267 87 0 13 chr20 41963354 41963664 -30190218 - AluSp SINE Alu -7 306 1 2086 157 99 17 chr20 41963944 41964408 -30189474 + Tigger3b DNA MER2_type 25 526 -705 437 188 99 40 chr20 41964408 41964537 -30189345 - AluJ SINE Alu 0 312 192 871 149 7 0 chr20 41964537 41964678 -30189204 - AluJ SINE Alu -170 142 1 2170 153 99 14 chr20 41964678 41965175 -30188707 + Tigger3b DNA MER2_type 532 1070 -161 2022 118 47 0 chr20 41966145 41966441 -30187441 - AluSg SINE Alu 0 310 1 2218 71 0 45 chr20 41966668 41966977 -30186905 - AluY SINE Alu -14 297 3 2241 96 0 0 chr20 41968357 41968649 -30185233 + AluSx SINE Alu 1 292 -20 1007 127 0 0 chr20 41973106 41973248 -30180634 - AluSg/x SINE Alu -15 295 154 1948 134 14 0 chr20 41973797 41974087 -30179795 - AluSx SINE Alu -18 294 1 1779 151 24 3 chr20 41974096 41974388 -30179494 - AluJo SINE Alu -13 299 2 2321 92 0 0 chr20 41974623 41974928 -30178954 - AluY SINE Alu -6 305 1 1724 149 0 42 chr20 41975727 41976015 -30177867 - AluSx SINE Alu -36 276 1 1049 127 18 0 chr20 41976401 41976567 -30177315 - FRAM SINE Alu -7 169 1 301 336 114 28 chr20 41977853 41978064 -30175818 - L1M4 LINE L1 -2789 3357 3129 501 156 0 0 chr20 41979187 41979264 -30174618 - AluS SINE Alu -234 79 3 2121 132 0 0 chr20 41980434 41980738 -30173144 - AluSq SINE Alu -9 304 1 2526 50 0 0 chr20 41981396 41981698 -30172184 + AluY SINE Alu 1 302 -9 2426 72 0 0 chr20 41981705 41982010 -30171872 + AluY SINE Alu 1 305 -6 2317 90 0 3 chr20 41982052 41982362 -30171520 + AluSp SINE Alu 1 309 -4 336 171 86 65 chr20 41984299 41984459 -30169423 - L1MD3 LINE L1 0 8039 7882 376 214 30 0 chr20 41984529 41984697 -30169185 + (TG)n Simple_repeat Simple_repeat 1 173 0 223 283 87 29 chr20 41987575 41987713 -30166169 - L2 LINE L2 -252 3020 2875 277 333 24 0 chr20 41987755 41987878 -30166004 + (CA)n Simple_repeat Simple_repeat 1 126 0 336 330 0 0 chr20 41989100 41989218 -30164664 + (CA)n Simple_repeat Simple_repeat 1 118 0 291 269 0 0 chr20 41989969 41990077 -30163805 + (ATG)n Simple_repeat Simple_repeat 3 110 0 23 54 0 0 chr20 41994984 41995021 -30158861 + GC_rich Low_complexity Low_complexity 1 37 0 23 0 0 0 chr20 41995138 41995161 -30158721 + GC_rich Low_complexity Low_complexity 1 23 0 27 96 0 0 chr20 41995296 41995379 -30158503 + GC_rich Low_complexity Low_complexity 1 83 0 210 118 0 0 chr20 41996540 41996574 -30157308 + (CCG)n Simple_repeat Simple_repeat 3 36 0 187 89 0 44 chr20 41996935 41996980 -30156902 + (CACGC)n Simple_repeat Simple_repeat 4 46 0 424 237 5 48 chr20 42001522 42001708 -30152174 + (TCTCTG)n Simple_repeat Simple_repeat 3 180 0 184 130 43 0 chr20 42001729 42001775 -30152107 + (TCTCTG)n Simple_repeat Simple_repeat 2 49 0 401 164 15 47 chr20 42001801 42002150 -30151732 + (TCTCTG)n Simple_repeat Simple_repeat 1 337 0 435 339 42 4 chr20 42002923 42003183 -30150699 - MER113 DNA MER1_type? -151 370 101 269 225 11 0 chr20 42006606 42006695 -30147187 + G-rich Low_complexity Low_complexity 5 94 0 247 211 22 78 chr20 42009305 42009395 -30144487 + MER69A DNA AcHobo 8 92 -85 707 281 91 37 chr20 42012117 42012469 -30141413 - MLT1C LTR MaLR -52 415 45 1375 248 41 55 chr20 42014271 42014356 -30139526 - L1MB7 LINE L1 -6 6178 6093 2294 89 3 0 chr20 42014356 42014660 -30139222 - AluSg SINE Alu -5 305 1 1375 248 41 55 chr20 42014660 42015087 -30138795 - L1MB7 LINE L1 -91 6093 5673 416 252 19 0 chr20 42015156 42015263 -30138619 - L1M4 LINE L1 -470 5708 5600 375 234 5 0 chr20 42015360 42015456 -30138426 - L1M4 LINE L1 -588 5596 5502 409 127 84 0 chr20 42015491 42015657 -30138225 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 587 118 65 18 chr20 42015701 42015871 -30138011 + (TCCA)n Simple_repeat Simple_repeat 2 179 0 237 222 0 0 chr20 42015889 42015952 -30137930 + (TCCA)n Simple_repeat Simple_repeat 1 63 0 2310 94 0 0 chr20 42016201 42016500 -30137382 - AluSg SINE Alu -11 299 1 327 308 171 14 chr20 42016687 42016833 -30137049 - MER5A DNA MER1_type 0 189 21 442 136 20 58 chr20 42019202 42019519 -30134363 + GA-rich Low_complexity Low_complexity 1 304 0 257 281 12 12 chr20 42019666 42019748 -30134134 + CT-rich Low_complexity Low_complexity 1 82 0 491 285 23 0 chr20 42020663 42020793 -30133089 - MIR SINE MIR -117 145 13 439 160 113 9 chr20 42021516 42021622 -30132260 + MIR SINE MIR 13 129 -133 522 219 129 9 chr20 42023912 42024140 -30129742 - MLT1C LTR MaLR -178 212 1 1744 169 0 23 chr20 42024570 42024871 -30129011 + AluJb SINE Alu 6 299 -13 181 364 85 8 chr20 42025242 42025360 -30128522 + MIR SINE MIR 116 242 -20 1212 275 65 7 chr20 42025480 42025895 -30127987 + L1MB8 LINE L1 5735 6173 -5 315 306 20 41 chr20 42025932 42026030 -30127852 + L1ME2 LINE L1 678 773 -5297 4119 274 66 39 chr20 42026038 42028659 -30125223 + L1ME2 LINE L1 879 3575 -2505 892 226 67 5 chr20 42028659 42028854 -30125028 + MER63A DNA MER1_type 1 207 -3 4119 274 66 39 chr20 42028854 42028964 -30124918 + L1ME2 LINE L1 3575 3681 -2399 242 186 0 0 chr20 42028964 42029007 -30124875 - Tigger5 DNA MER2_type 0 2323 2281 319 234 0 0 chr20 42029007 42029071 -30124811 + Tigger5 DNA MER2_type 2251 2314 -9 990 134 5 85 chr20 42029138 42029361 -30124521 + MER2 DNA MER2_type 6 210 -135 566 241 24 6 chr20 42029467 42029633 -30124249 + L1ME2 LINE L1 3680 3848 -2232 299 205 51 90 chr20 42029744 42029900 -30123982 + L1ME2 LINE L1 5001 5150 -930 5734 137 95 19 chr20 42029923 42030075 -30123807 + HSMAR2 DNA Mariner 3 142 -1160 2263 121 0 0 chr20 42030075 42030388 -30123494 + AluSq SINE Alu 1 313 0 5734 137 95 19 chr20 42030388 42031442 -30122440 + HSMAR2 DNA Mariner 142 1301 -1 2137 280 48 16 chr20 42031490 42032255 -30121627 + L1ME2 LINE L1 5291 6080 -18 192 260 20 0 chr20 42032509 42032559 -30121323 + MIR SINE MIR 97 147 -115 2329 80 0 3 chr20 42033593 42033892 -30119990 + AluSx SINE Alu 1 298 -14 269 167 76 0 chr20 42034433 42034499 -30119383 - AluJ/FRAM SINE Alu -13 289 219 2420 247 85 32 chr20 42034501 42035524 -30118358 - L1MD2 LINE L1 -22 6220 5188 3451 210 15 15 chr20 42036324 42037011 -30116871 + L1MB7 LINE L1 5488 6174 -10 21 36 0 0 chr20 42037459 42037487 -30116395 + AT_rich Low_complexity Low_complexity 1 28 0 2121 95 14 0 chr20 42037994 42038277 -30115605 + AluSg SINE Alu 1 287 -23 366 328 17 0 chr20 42038568 42038742 -30115140 + C-rich Low_complexity Low_complexity 3 179 0 399 314 18 0 chr20 42038763 42038932 -30114950 + C-rich Low_complexity Low_complexity 2 173 0 374 319 18 0 chr20 42039098 42039267 -30114615 + C-rich Low_complexity Low_complexity 2 173 0 368 292 6 48 chr20 42039297 42039533 -30114349 + C-rich Low_complexity Low_complexity 1 226 0 310 218 39 13 chr20 42041429 42041507 -30112375 + MIR SINE MIR 65 144 -118 250 354 0 0 chr20 42041714 42041810 -30112072 + (TG)n Simple_repeat Simple_repeat 1 96 0 2088 148 44 25 chr20 42042135 42042500 -30111382 + THE1C LTR MaLR 4 375 0 293 279 0 0 chr20 42043806 42043885 -30109997 + G-rich Low_complexity Low_complexity 1 79 0 483 341 89 40 chr20 42044505 42044868 -30109014 + L1 LINE L1 4303 4696 -1450 361 348 60 26 chr20 42045617 42045850 -30108032 + L1ME3 LINE L1 5730 5970 -192 1730 214 50 71 chr20 42045874 42046449 -30107433 + L1MB3 LINE L1 5620 6182 -1 1708 221 112 4 chr20 42047226 42047724 -30106158 - L1MC2 LINE L1 -2 6342 5791 259 339 83 0 chr20 42048624 42048745 -30105137 + MIR SINE MIR 60 190 -72 1831 138 55 0 chr20 42050001 42050291 -30103591 + AluSx SINE Alu 1 306 -6 264 175 25 12 chr20 42050292 42050372 -30103510 + MER53 DNA DNA 109 189 0 * 379 156 13 0 chr20 42050304 42050381 -30103501 - MER53 DNA DNA -111 78 1 483 141 77 0 chr20 42050949 42051027 -30102855 - FRAM SINE Alu -46 130 47 467 227 31 0 chr20 42051044 42051172 -30102710 + L1 LINE L1 4890 5021 -1125 540 227 89 49 chr20 42051504 42051707 -30102175 + MLT1D LTR MaLR 1 211 -294 234 288 91 8 chr20 42051786 42051918 -30101964 + MLT1D LTR MaLR 363 505 0 343 332 115 34 chr20 42052190 42052398 -30101484 - L1MC2 LINE L1 -683 5483 5259 734 319 49 0 chr20 42055273 42055599 -30098283 + L1ME3 LINE L1 5408 5749 -417 360 231 111 0 chr20 42055956 42056073 -30097809 + L1ME3 LINE L1 5947 6076 -86 465 167 0 24 chr20 42056208 42056292 -30097590 + AluJb SINE Alu 163 244 -68 232 242 95 42 chr20 42057824 42057919 -30095963 - L2 LINE L2 -33 3280 3181 445 160 30 8 chr20 42058783 42058914 -30094968 + (TG)n Simple_repeat Simple_repeat 1 134 0 282 29 0 0 chr20 42058962 42058997 -30094885 + (TG)n Simple_repeat Simple_repeat 1 35 0 326 256 220 12 chr20 42059610 42059860 -30094022 + LTR16C LTR ERVL 186 487 -4 2105 129 7 0 chr20 42060378 42060681 -30093201 - AluSx SINE Alu 0 312 8 1089 321 155 29 chr20 42061808 42062750 -30091132 + L1M4 LINE L1 3273 4393 -1753 530 289 114 23 chr20 42062951 42063294 -30090588 + L1M4 LINE L1 15 388 -6152 4487 245 60 9 chr20 42063497 42063733 -30090149 + L1M4 LINE L1 4156 4379 -2189 2696 139 59 0 chr20 42063733 42064137 -30089745 + MSTA LTR MaLR 1 428 0 4487 245 60 9 chr20 42064137 42065595 -30088287 + L1M4 LINE L1 4379 5943 -625 1323 209 4 4 chr20 42065625 42065902 -30087980 - MLT1A1 LTR MaLR -87 278 2 699 206 167 0 chr20 42067109 42067366 -30086516 - MLT1D LTR MaLR -33 472 173 267 250 43 11 chr20 42067450 42067542 -30086340 - MLT1D LTR MaLR -359 146 52 * 373 250 26 26 chr20 42067538 42067654 -30086228 - MLT1D LTR MaLR -389 116 1 583 180 163 0 chr20 42069742 42069914 -30083968 - MER58 DNA MER1_type -2187 233 34 382 134 47 35 chr20 42070690 42070862 -30083020 + CT-rich Low_complexity Low_complexity 1 174 0 180 231 0 0 chr20 42072271 42072323 -30081559 + (CA)n Simple_repeat Simple_repeat 1 52 0 1109 117 9 0 chr20 42072386 42072609 -30081273 + (GA)n Simple_repeat Simple_repeat 1 225 0 203 333 0 0 chr20 42074194 42074260 -30079622 + CT-rich Low_complexity Low_complexity 2 67 0 685 173 25 3 chr20 42075047 42075592 -30078290 + (TCCA)n Simple_repeat Simple_repeat 1 557 0 2295 84 0 3 chr20 42075839 42076138 -30077744 + AluSg SINE Alu 5 302 -8 207 100 0 0 chr20 42078373 42078403 -30075479 + (CAAG)n Simple_repeat Simple_repeat 2 31 0 638 203 145 32 chr20 42078502 42078546 -30075336 - MLT1D LTR MaLR -9 496 458 601 146 0 36 chr20 42078546 42078656 -30075226 + L1MA3 LINE L1 6200 6305 0 638 203 145 32 chr20 42078656 42078910 -30074972 - MLT1D LTR MaLR -47 458 116 399 244 0 0 chr20 42079063 42079153 -30074729 + MER53 DNA DNA 15 104 -85 2221 108 0 0 chr20 42080236 42080533 -30073349 - AluSx SINE Alu -15 297 1 307 70 0 0 chr20 42083437 42083480 -30070402 + Alu SINE Alu 1 43 -258 1629 106 0 13 chr20 42083482 42083719 -30070163 + AluY SINE Alu 3 236 -75 24 0 0 0 chr20 42184992 42185016 -29968866 + GC_rich Low_complexity Low_complexity 1 24 0 34 55 0 0 chr20 42185227 42185282 -29968600 + GC_rich Low_complexity Low_complexity 1 55 0 34 55 0 0 chr20 42185371 42185426 -29968456 + GC_rich Low_complexity Low_complexity 1 55 0 821 111 17 28 chr20 42185470 42185651 -29968231 + (GGGGA)n Simple_repeat Simple_repeat 2 180 0 304 147 37 37 chr20 42185654 42185763 -29968119 + G-rich Low_complexity Low_complexity 1 109 0 1668 174 17 0 chr20 42188670 42188969 -29964913 + AluJo SINE Alu 1 304 -8 1222 140 0 0 chr20 42188969 42189147 -29964735 + AluJo/FRAM SINE Alu 134 311 -1 21 0 0 0 chr20 42189156 42189177 -29964705 + AT_rich Low_complexity Low_complexity 1 21 0 2270 104 0 0 chr20 42189187 42189485 -29964397 + AluSq SINE Alu 1 298 -15 2080 125 6 0 chr20 42189487 42189798 -29964084 + AluSp SINE Alu 1 313 0 1198 220 34 18 chr20 42192124 42192451 -29961431 + MLT1A1 LTR MaLR 21 352 -13 655 238 37 37 chr20 42193091 42193305 -29960577 + MER20 DNA MER1_type 1 214 -5 2193 89 10 3 chr20 42193316 42193609 -29960273 + AluSg SINE Alu 1 295 -15 2132 126 3 0 chr20 42193650 42193960 -29959922 + AluSq SINE Alu 1 311 -2 235 333 83 0 chr20 42194225 42194345 -29959537 + MIR SINE MIR 28 157 -105 2196 52 28 0 chr20 42196298 42196588 -29957294 + AluY SINE Alu 1 298 -13 430 225 139 20 chr20 42197265 42197416 -29956466 + Charlie1 DNA MER1_type 4 172 -2589 478 255 101 0 chr20 42198561 42198710 -29955172 - MER53 DNA DNA 0 189 26 698 278 153 11 chr20 42198993 42199346 -29954536 + MLT1D LTR MaLR 23 425 -80 211 119 17 51 chr20 42200907 42200966 -29952916 + G-rich Low_complexity Low_complexity 5 61 0 21 71 0 0 chr20 42200978 42201020 -29952862 + GC_rich Low_complexity Low_complexity 1 42 0 265 173 19 77 chr20 42202209 42202224 -29951658 + MER69 DNA AcHobo 2221 2235 -291 2317 90 0 0 chr20 42202224 42202524 -29951358 + AluSx SINE Alu 1 300 -12 265 173 19 77 chr20 42202524 42202612 -29951270 + MER69 DNA AcHobo 2235 2318 -208 2434 63 3 3 chr20 42202786 42203088 -29950794 - AluSc SINE Alu -7 302 1 777 185 0 0 chr20 42204343 42204516 -29949366 + (TGGA)n Simple_repeat Simple_repeat 2 174 0 1159 137 13 2 chr20 42204562 42205278 -29948604 + (TGGA)n Simple_repeat Simple_repeat 1 724 0 899 143 2 19 chr20 42205302 42205719 -29948163 + (TGGA)n Simple_repeat Simple_repeat 1 409 0 349 290 44 2 chr20 42207988 42208131 -29945751 + MIR SINE MIR 8 136 -72 48 81 0 0 chr20 42211584 42211695 -29942187 + GC_rich Low_complexity Low_complexity 1 111 0 22 35 0 0 chr20 42211741 42211770 -29942112 + GC_rich Low_complexity Low_complexity 1 29 0 339 193 16 86 chr20 42211909 42212096 -29941786 + G-rich Low_complexity Low_complexity 6 179 0 812 208 235 4 chr20 42213925 42214189 -29939693 + MSTD LTR MaLR 21 345 -51 252 79 0 0 chr20 42214244 42214282 -29939600 + MSTD LTR MaLR 406 443 -14 250 213 16 0 chr20 42214501 42214562 -29939320 - MIR SINE MIR -131 131 70 687 253 7 19 chr20 42216711 42216967 -29936915 - L1ME3A LINE L1 -200 5970 5660 1995 157 0 0 chr20 42217120 42217425 -29936457 - AluJb SINE Alu -7 305 1 243 243 0 14 chr20 42217426 42217496 -29936386 - LTR41 LTR ERVL -701 72 4 265 298 12 0 chr20 42217497 42217581 -29936301 - L1MCc LINE L1 -5045 1378 1294 984 264 99 15 chr20 42218020 42218494 -29935388 + MLT1E3 LTR MaLR 43 617 -7 526 270 195 0 chr20 42218957 42219198 -29934684 - L1MC4 LINE L1 -460 7582 7295 1956 119 3 14 chr20 42219198 42219491 -29934391 + AluSx SINE Alu 1 290 -22 2268 133 23 76 chr20 42219518 42219686 -29934196 - MER41E LTR ERV1 0 512 337 531 165 174 17 chr20 42219686 42219801 -29934081 + FLAM_A SINE Alu 1 133 0 2268 133 23 76 chr20 42219801 42220119 -29933763 - MER41E LTR ERV1 -175 337 52 242 265 77 29 chr20 42220123 42220293 -29933589 + (CAGTC)n Simple_repeat Simple_repeat 3 180 0 * 282 297 58 0 chr20 42220258 42220446 -29933436 + (CTCGG)n Simple_repeat Simple_repeat 1 198 0 295 210 25 0 chr20 42220446 42220527 -29933355 - MER41E LTR ERV1 -429 83 1 277 258 72 0 chr20 42220607 42220704 -29933178 - L1MC4 LINE L1 -762 7280 7177 1017 302 86 35 chr20 42220967 42221506 -29932376 - L1ME1 LINE L1 -278 5888 5319 2238 78 3 23 chr20 42221506 42221815 -29932067 - AluSx SINE Alu -5 307 5 3425 201 55 64 chr20 42221829 42222273 -29931609 - L1MB7 LINE L1 0 6184 5737 2350 79 0 0 chr20 42222273 42222563 -29931319 - AluSx SINE Alu -22 290 1 3425 201 55 64 chr20 42222563 42222938 -29930944 - L1MB7 LINE L1 -447 5737 5360 2252 94 0 3 chr20 42222938 42223237 -29930645 - AluSg SINE Alu -12 298 1 3425 201 55 64 chr20 42223237 42223707 -29930175 - L1MB7 LINE L1 -824 5360 4905 1740 156 32 0 chr20 42223707 42223990 -29929892 - AluJb SINE Alu -19 293 2 3425 201 55 64 chr20 42223990 42224129 -29929753 - L1MB7 LINE L1 -1279 4905 4766 2478 75 0 0 chr20 42224129 42224437 -29929445 - AluSc SINE Alu -1 308 1 209 114 29 0 chr20 42224442 42224477 -29929405 + T-rich Low_complexity Low_complexity 2 37 0 1961 104 25 0 chr20 42224548 42224863 -29929019 + AluSx SINE Alu 1 322 0 336 233 12 0 chr20 42224871 42224957 -29928925 + L1MB5 LINE L1 4884 4970 -1176 3273 187 72 15 chr20 42225314 42225351 -29928531 + L1MB5 LINE L1 5022 5055 -1119 1685 185 0 7 chr20 42225351 42225653 -29928229 + AluJb SINE Alu 1 300 -12 3273 187 72 15 chr20 42225653 42226607 -29927275 + L1MB5 LINE L1 5055 6165 -9 2256 93 0 0 chr20 42226643 42226933 -29926949 - AluSx SINE Alu -22 290 1 459 298 45 25 chr20 42226942 42227213 -29926669 - L1MB7 LINE L1 -1446 4700 4436 2097 113 143 49 chr20 42227213 42227498 -29926384 - MSTA LTR MaLR 0 428 95 2309 78 0 31 chr20 42227498 42227818 -29926064 + AluSg SINE Alu 1 310 0 2097 113 143 49 chr20 42227818 42227923 -29925959 - MSTA LTR MaLR -333 95 1 459 298 45 25 chr20 42227923 42228138 -29925744 - L1MB7 LINE L1 -1710 4436 4227 1872 134 9 37 chr20 42228138 42228459 -29925423 - AluSx SINE Alu 0 312 1 459 298 45 25 chr20 42228459 42228652 -29925230 - L1MB7 LINE L1 -1919 4227 3918 1189 114 5 27 chr20 42228757 42228941 -29924941 - AluSp SINE Alu 0 313 134 2145 118 16 0 chr20 42228941 42229245 -29924637 - AluSx SINE Alu -2 310 2 2466 58 0 10 chr20 42229307 42229619 -29924263 - AluY SINE Alu -2 309 1 230 215 15 0 chr20 42229619 42229684 -29924198 - L1MDb LINE L1 -5401 1246 1181 847 168 21 0 chr20 42229694 42229837 -29924045 - FRAM SINE Alu -16 160 15 321 280 35 7 chr20 42229839 42229982 -29923900 - L1MDb LINE L1 -6382 160 14 202 291 87 39 chr20 42230019 42230122 -29923760 - L2 LINE L2 -5 3267 3160 279 358 109 0 chr20 42230179 42230316 -29923566 - MIR SINE MIR -2 260 109 22 56 0 0 chr20 42233657 42233693 -29920189 + GC_rich Low_complexity Low_complexity 1 36 0 22 0 0 0 chr20 42233857 42233879 -29920003 + GC_rich Low_complexity Low_complexity 1 22 0 273 246 0 0 chr20 42234655 42234720 -29919162 + C-rich Low_complexity Low_complexity 1 65 0 2464 129 109 30 chr20 42236480 42236807 -29917075 - LTR10A LTR ERV1 -64 545 163 2425 59 0 7 chr20 42236807 42237111 -29916771 + AluY SINE Alu 1 302 -9 2464 129 109 30 chr20 42237111 42237288 -29916594 - LTR10A LTR ERV1 -446 163 1 1733 167 0 45 chr20 42237314 42237626 -29916256 + AluSx SINE Alu 3 300 -12 3172 182 69 95 chr20 42237894 42238333 -29915549 + MER31-int LTR ERV1 3611 4060 -876 2412 63 3 0 chr20 42238333 42238632 -29915250 + AluY SINE Alu 1 300 -11 3172 182 69 95 chr20 42238632 42238677 -29915205 + MER31-int LTR ERV1 4060 4105 -831 1533 188 3 7 chr20 42238677 42238959 -29914923 + AluJo SINE Alu 22 302 -10 3172 182 69 95 chr20 42238959 42239130 -29914752 + MER31-int LTR ERV1 4105 4279 -657 2308 98 0 0 chr20 42239130 42239435 -29914447 + AluSx SINE Alu 1 305 -7 2419 85 0 0 chr20 42239441 42239747 -29914135 + AluSp SINE Alu 1 306 -7 3172 182 69 95 chr20 42239747 42240062 -29913820 + MER31-int LTR ERV1 4284 4565 -371 1719 141 54 24 chr20 42240066 42240364 -29913518 + AluJo SINE Alu 1 307 -5 2157 238 32 59 chr20 42240365 42241114 -29912768 - LTR49-int LTR ERV1 -1394 3542 2814 2420 63 0 22 chr20 42241118 42241436 -29912446 - AluY SINE Alu 0 311 1 422 184 82 61 chr20 42241437 42241584 -29912298 - LTR49-int LTR ERV1 -4795 1536 1387 253 233 0 17 chr20 42241622 42241682 -29912200 - LTR49-int LTR ERV1 -5697 634 576 2604 30 0 0 chr20 42243863 42244161 -29909721 + AluY SINE Alu 1 298 -13 243 0 0 0 chr20 42244161 42244188 -29909694 + (TA)n Simple_repeat Simple_repeat 1 27 0 1260 108 0 0 chr20 42244188 42244355 -29909527 + AluSg/x SINE Alu 131 297 -13 768 145 3 16 chr20 42244847 42245168 -29908714 + (TG)n Simple_repeat Simple_repeat 1 316 0 2301 107 0 0 chr20 42245779 42246089 -29907793 - AluSg SINE Alu 0 310 1 381 329 7 7 chr20 42248104 42248256 -29905626 + (CACG)n Simple_repeat Simple_repeat 4 155 0 478 322 0 0 chr20 42248481 42248661 -29905221 + C-rich Low_complexity Low_complexity 1 180 0 331 239 0 38 chr20 42248697 42248926 -29904956 + C-rich Low_complexity Low_complexity 1 220 0 252 139 0 0 chr20 42256424 42256467 -29897415 + L2 LINE L2 3271 3313 0 879 183 13 3 chr20 42256469 42256782 -29897100 + (TGAA)n Simple_repeat Simple_repeat 1 316 0 192 125 0 0 chr20 42259695 42259727 -29894155 + (TGAA)n Simple_repeat Simple_repeat 1 32 0 465 322 0 0 chr20 42261868 42262045 -29891837 + C-rich Low_complexity Low_complexity 1 177 0 1431 119 175 0 chr20 42262080 42262332 -29891550 - AluJo SINE Alu -6 306 11 778 124 7 58 chr20 42263049 42263186 -29890696 + AluJo/FLAM SINE Alu 1 130 -172 2037 118 3 10 chr20 42263186 42263483 -29890399 + AluSx SINE Alu 1 295 -17 380 179 42 53 chr20 42263486 42263581 -29890301 + MIR SINE MIR 47 140 -122 1103 219 105 6 chr20 42263958 42264300 -29889582 + L1MD1 LINE L1 5861 6236 -6 1974 100 3 50 chr20 42264300 42264474 -29889408 - AluSq SINE Alu 0 306 151 1672 52 57 0 chr20 42264474 42264685 -29889197 - AluY SINE Alu -14 297 75 1974 100 3 50 chr20 42264685 42264830 -29889052 - AluSq SINE Alu -155 151 1 1717 166 0 13 chr20 42264831 42265132 -29888750 - AluJb SINE Alu -15 297 1 444 242 16 31 chr20 42265468 42265596 -29888286 + FLAM_C SINE Alu 1 126 -7 23 0 0 0 chr20 42266810 42266833 -29887049 + GC_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr20 42266948 42266969 -29886913 + GC_rich Low_complexity Low_complexity 1 21 0 198 197 106 0 chr20 42269960 42270026 -29883856 + L2 LINE L2 3005 3077 -195 267 31 0 0 chr20 42271092 42271124 -29882758 + (GGGTG)n Simple_repeat Simple_repeat 4 35 0 2221 90 7 0 chr20 42271259 42271559 -29882323 - AluSx SINE Alu -9 303 2 263 379 0 11 chr20 42272147 42272321 -29881561 + (GGGTG)n Simple_repeat Simple_repeat 4 175 0 299 201 27 60 chr20 42272390 42272574 -29881308 + (TCGGG)n Simple_repeat Simple_repeat 1 178 0 251 242 65 0 chr20 42279423 42279485 -29874397 - MIR SINE MIR -80 182 117 275 318 47 9 chr20 42282463 42282570 -29871312 + MIR SINE MIR 37 147 -115 2130 102 3 35 chr20 42282670 42282983 -29870899 - AluSq SINE Alu -10 303 1 472 263 20 56 chr20 42282990 42283171 -29870711 - MIR SINE MIR -61 147 25 21 0 0 0 chr20 42285198 42285219 -29868663 + GC_rich Low_complexity Low_complexity 1 21 0 285 204 14 88 chr20 42286764 42286911 -29866971 + C-rich Low_complexity Low_complexity 2 137 0 222 37 0 0 chr20 42287005 42287032 -29866850 + (CCCCG)n Simple_repeat Simple_repeat 1 27 0 1146 137 0 0 chr20 42287649 42287824 -29866058 + AluSg/x SINE Alu 133 307 -5 314 167 0 0 chr20 42287830 42287884 -29865998 + MLT1G1 LTR MaLR 535 588 -7 1330 174 6 104 chr20 42288282 42288609 -29865273 - AluJb SINE Alu -17 295 1 2148 89 0 74 chr20 42288780 42289116 -29864766 + AluSx SINE Alu 1 311 -1 454 299 74 42 chr20 42289527 42289671 -29864211 + L1 LINE L1 5109 5247 -922 2319 56 24 3 chr20 42289671 42289958 -29863924 - AluY SINE Alu -18 293 1 454 299 74 42 chr20 42289958 42290123 -29863759 + L1 LINE L1 5247 5425 -744 808 181 0 0 chr20 42290413 42290551 -29863331 + FRAM SINE Alu 1 138 -38 269 237 35 53 chr20 42291215 42291329 -29862553 + L1MC4 LINE L1 7931 8042 0 2256 175 136 25 chr20 42291965 42292553 -29861329 + MER21B LTR ERV1 1 653 -210 371 286 149 7 chr20 42293573 42293727 -29860155 + MER21B LTR ERV1 677 852 -11 931 284 48 72 chr20 42294393 42294585 -29859297 + L1ME3A LINE L1 4886 5081 -1093 2380 70 6 19 chr20 42294585 42294900 -29858982 - AluY SINE Alu 0 311 1 931 284 48 72 chr20 42294900 42295079 -29858803 + L1ME3A LINE L1 5081 5263 -911 1857 158 10 0 chr20 42295079 42295383 -29858499 - AluJo SINE Alu 0 312 6 931 284 48 72 chr20 42295383 42296164 -29857718 + L1ME3A LINE L1 5263 6011 -163 2175 90 20 17 chr20 42296222 42296521 -29857361 + AluSx SINE Alu 1 300 -12 1928 124 7 10 chr20 42296523 42296821 -29857061 + AluSx SINE Alu 1 297 -15 2186 121 0 3 chr20 42296885 42297190 -29856692 - AluSx SINE Alu -8 304 1 2085 62 0 48 chr20 42297199 42297489 -29856393 - AluSc SINE Alu -10 299 24 556 318 114 8 chr20 42299207 42299286 -29854596 + L1MEd LINE L1 780 849 -5270 848 129 0 43 chr20 42299286 42299425 -29854457 + FLAM_C SINE Alu 1 133 0 556 318 114 8 chr20 42299425 42299600 -29854282 + L1MEd LINE L1 849 1061 -5058 363 243 36 18 chr20 42299688 42299799 -29854083 + L1MC4 LINE L1 6950 7062 -980 1414 248 75 44 chr20 42299908 42300219 -29853663 + L1MC4 LINE L1 7269 7569 -473 2314 101 0 0 chr20 42300219 42300525 -29853357 - AluSx SINE Alu -6 306 1 1414 248 75 44 chr20 42300525 42300616 -29853266 + L1MC4 LINE L1 7569 7656 -386 2156 98 0 10 chr20 42300616 42300912 -29852970 + AluSx SINE Alu 1 293 -19 1414 248 75 44 chr20 42300912 42301104 -29852778 + L1MC4 LINE L1 7656 7883 -159 238 309 0 0 chr20 42301177 42301245 -29852637 + L1MC3 LINE L1 7706 7773 -12 270 0 0 0 chr20 42302587 42302617 -29851265 + (TG)n Simple_repeat Simple_repeat 2 31 0 1728 184 7 10 chr20 42303498 42303808 -29850074 + AluJb SINE Alu 1 309 -3 2056 133 3 0 chr20 42303916 42304225 -29849657 - AluSx SINE Alu -2 310 1 2012 107 50 0 chr20 42305926 42306206 -29847676 + AluSx SINE Alu 1 294 -18 1998 106 7 0 chr20 42306938 42307221 -29846661 - AluSx SINE Alu -27 285 1 1961 123 10 3 chr20 42309196 42309488 -29844394 + AluSx SINE Alu 1 294 -18 303 211 5 106 chr20 42309597 42309796 -29844086 + (TG)n Simple_repeat Simple_repeat 2 180 0 315 235 167 8 chr20 42313473 42313605 -29840277 + Charlie1 DNA MER1_type 6 158 -2603 562 221 15 7 chr20 42313625 42313761 -29840121 - MLT1A1 LTR MaLR -1 364 228 2311 85 3 0 chr20 42314142 42314435 -29839447 + AluSq SINE Alu 3 296 -17 1587 176 19 6 chr20 42315245 42315558 -29838324 - L1MC/D LINE L1 -520 5813 5497 259 154 19 0 chr20 42315544 42315596 -29838286 - L1MC/D LINE L1 -795 5549 5497 * 237 200 46 0 chr20 42315609 42315674 -29838208 - L1MC/D LINE L1 -2223 5562 5495 392 161 49 0 chr20 42315798 42315879 -29838003 - L1MC/D LINE L1 -784 5549 5465 2043 136 3 0 chr20 42315879 42316187 -29837695 - AluSx SINE Alu -3 309 1 877 97 0 91 chr20 42316187 42316217 -29837665 - AluJo SINE Alu -172 140 109 2254 71 10 3 chr20 42316217 42316511 -29837371 + AluY SINE Alu 1 296 -15 877 97 0 91 chr20 42316511 42316634 -29837248 - AluJo SINE Alu -203 109 1 717 201 54 25 chr20 42316640 42316864 -29837018 - L1MC/D LINE L1 -743 5403 5237 697 239 101 36 chr20 42416869 42417016 -29736866 + L1MB7 LINE L1 5882 6018 -166 2167 94 10 0 chr20 42417016 42417314 -29736568 - AluSx SINE Alu -11 301 1 697 239 101 36 chr20 42417314 42417442 -29736440 + L1MB7 LINE L1 6018 6175 -9 328 188 8 51 chr20 42417677 42417794 -29736088 + (CGGGG)n Simple_repeat Simple_repeat 5 116 0 262 197 15 45 chr20 42417845 42417911 -29735971 + C-rich Low_complexity Low_complexity 6 69 0 320 323 44 6 chr20 42417998 42418156 -29735726 + MIR SINE MIR 22 185 -77 257 322 124 30 chr20 42418836 42419038 -29734844 - MIR SINE MIR -27 235 15 281 341 25 84 chr20 42419122 42419445 -29734437 + L2 LINE L2 2962 3265 -7 544 117 21 0 chr20 42420910 42421004 -29732878 + MER53 DNA DNA 1 96 -93 504 0 0 0 chr20 42421004 42421060 -29732822 + (TA)n Simple_repeat Simple_repeat 2 57 0 222 150 0 0 chr20 42421182 42421222 -29732660 + (TATAA)n Simple_repeat Simple_repeat 2 41 0 242 170 19 0 chr20 42421298 42421351 -29732531 - MER53 DNA DNA -128 61 8 294 282 0 0 chr20 42421774 42421845 -29732037 + MER5A DNA MER1_type 5 75 -114 232 277 9 9 chr20 42421929 42422041 -29731841 + (CA)n Simple_repeat Simple_repeat 2 113 0 1366 189 0 26 chr20 42422358 42422648 -29731234 + AluJo SINE Alu 25 307 0 315 333 138 5 chr20 42422786 42422975 -29730907 - MIR SINE MIR -26 236 23 2784 110 0 3 chr20 42424561 42424935 -29728947 - THE1C LTR MaLR 0 375 3 238 240 10 52 chr20 42426729 42426825 -29727057 + (CACCC)n Simple_repeat Simple_repeat 4 95 0 208 195 0 46 chr20 42426848 42426935 -29726947 + (CACCC)n Simple_repeat Simple_repeat 3 85 0 2098 127 0 10 chr20 42428027 42428335 -29725547 - AluSx SINE Alu -6 306 2 1361 266 70 25 chr20 42428892 42429410 -29724472 - MLT1E2 LTR MaLR -7 619 79 1926 116 45 63 chr20 42429583 42429909 -29723973 - MER51A LTR ERV1 0 634 304 2033 125 0 20 chr20 42429909 42430213 -29723669 + AluSx SINE Alu 1 298 -14 238 67 44 0 chr20 42430216 42430261 -29723621 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 1926 116 45 63 chr20 42430261 42430480 -29723402 - MER51A LTR ERV1 -332 302 1 2084 98 3 3 chr20 42430659 42430945 -29722937 - AluSg1 SINE Alu -23 286 1 2741 246 46 23 chr20 42431551 42432114 -29721768 - MER67C LTR ERV1 0 710 127 2115 99 13 3 chr20 42432114 42432418 -29721464 + AluSc SINE Alu 1 307 -2 2741 246 46 23 chr20 42432418 42432548 -29721334 - MER67C LTR ERV1 -583 127 1 239 176 0 39 chr20 42433554 42433605 -29720277 + L2 LINE L2 3219 3267 -5 324 329 42 6 chr20 42434869 42435036 -29718846 + (TCCCG)n Simple_repeat Simple_repeat 3 175 0 * 372 251 16 49 chr20 42434912 42435095 -29718787 + CT-rich Low_complexity Low_complexity 1 177 0 255 168 76 0 chr20 42435124 42435243 -29718639 + (TCCTG)n Simple_repeat Simple_repeat 3 130 0 372 277 108 19 chr20 42435317 42435530 -29718352 + LTR16A LTR ERVL 202 433 -17 622 195 157 5 chr20 42436318 42436528 -29717354 + MLT1D LTR MaLR 107 348 -157 227 262 33 0 chr20 42436535 42436596 -29717286 + MER91B DNA MER1_type 1 63 -127 324 235 41 10 chr20 42438828 42438926 -29714956 + L1MC/D LINE L1 5534 5634 -2174 490 95 0 0 chr20 42439531 42439605 -29714277 - Alu SINE Alu 0 311 238 228 313 0 0 chr20 42439733 42439800 -29714082 - LTR16A LTR ERVL -296 154 88 273 292 35 0 chr20 42441280 42441374 -29712508 + MIR SINE MIR 51 138 -70 340 327 7 4 chr20 42442836 42443125 -29710757 + (TG)n Simple_repeat Simple_repeat 1 290 0 306 73 0 0 chr20 42443896 42443937 -29709945 + (TGGA)n Simple_repeat Simple_repeat 3 43 0 389 322 41 0 chr20 42443951 42444097 -29709785 - MER5A DNA MER1_type -2 187 36 324 0 0 0 chr20 42444484 42444520 -29709362 + (TTCC)n Simple_repeat Simple_repeat 2 37 0 1105 95 12 0 chr20 42444524 42444693 -29709189 + (TTTC)n Simple_repeat Simple_repeat 1 171 0 2185 119 6 3 chr20 42444702 42445120 -29708762 - AluSq SINE Alu 0 419 1 208 239 15 15 chr20 42445494 42445561 -29708321 + GA-rich Low_complexity Low_complexity 1 67 0 234 245 28 56 chr20 42446873 42447016 -29706866 + GA-rich Low_complexity Low_complexity 3 141 0 203 222 0 37 chr20 42449140 42449194 -29704688 - MIR SINE MIR -64 144 93 201 244 0 0 chr20 42449369 42449414 -29704468 + (TGAG)n Simple_repeat Simple_repeat 4 48 0 193 260 188 0 chr20 42449944 42450040 -29703842 - MIR SINE MIR -128 134 21 234 188 14 110 chr20 42450425 42450512 -29703370 - MIR SINE MIR -61 147 86 2441 44 0 3 chr20 42452920 42453213 -29700669 - AluY SINE Alu -15 296 5 277 347 55 18 chr20 42453332 42453551 -29700331 - L3 LINE CR1 -40 1537 1311 572 272 40 0 chr20 42453604 42453777 -29700105 + MER68 LTR ERV1 1 180 -382 402 219 110 105 chr20 42453812 42454022 -29699860 + MER68 LTR ERV1 351 603 -2 3125 202 64 9 chr20 42454984 42455912 -29697970 + L1M3 LINE L1 4509 5485 -698 203 238 172 8 chr20 42456328 42456450 -29697432 + L2 LINE L2 2910 3051 -262 693 144 11 17 chr20 42456711 42456891 -29696991 + GA-rich Low_complexity Low_complexity 2 180 0 749 127 21 0 chr20 42456922 42457161 -29696721 + GA-rich Low_complexity Low_complexity 1 244 0 680 136 23 0 chr20 42457162 42457338 -29696544 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 213 194 0 0 chr20 42457338 42457374 -29696508 + polypurine Low_complexity Low_complexity 1 36 0 216 111 0 0 chr20 42457379 42457415 -29696467 + (GGGA)n Simple_repeat Simple_repeat 2 37 0 716 173 6 0 chr20 42457434 42457613 -29696269 + GA-rich Low_complexity Low_complexity 1 180 0 390 312 133 48 chr20 42460929 42461304 -29692578 + MLT1K LTR MaLR 149 555 -33 21 36 0 0 chr20 42461413 42461441 -29692441 + AT_rich Low_complexity Low_complexity 1 28 0 6039 176 67 106 chr20 42461450 42461495 -29692387 - L1MA9 LINE L1 -5 6307 6262 1774 166 0 7 chr20 42461495 42461784 -29692098 + AluJo SINE Alu 1 287 -25 6039 176 67 106 chr20 42461784 42461956 -29691926 - L1MA9 LINE L1 -50 6262 6085 2581 39 0 3 chr20 42461956 42462263 -29691619 - AluY SINE Alu -5 306 1 6039 176 67 106 chr20 42462263 42463328 -29690554 - L1MA9 LINE L1 -227 6085 4980 1625 27 0 0 chr20 42463328 42463512 -29690370 - AluY SINE Alu -127 184 1 6039 176 67 106 chr20 42463512 42463602 -29690280 - L1MA9 LINE L1 -1332 4980 4888 2511 171 17 2 chr20 42463602 42464024 -29689858 - MSTC LTR MaLR 0 428 1 6039 176 67 106 chr20 42464024 42464476 -29689406 - L1MA9 LINE L1 -1424 4888 4420 2184 113 3 0 chr20 42464476 42464778 -29689104 - AluSq SINE Alu -10 303 1 6039 176 67 106 chr20 42464778 42466144 -29687738 - L1MA9 LINE L1 -1892 4420 3240 379 354 85 55 chr20 42466990 42467462 -29686420 - L1MEd LINE L1 -1185 1305 749 1155 129 0 6 chr20 42467924 42468095 -29685787 - AluSp SINE Alu -10 303 134 2306 95 0 3 chr20 42468095 42468399 -29685483 - AluY SINE Alu -8 303 1 219 333 0 0 chr20 42470703 42470760 -29683122 - MIR SINE MIR -93 169 113 200 271 83 52 chr20 42473759 42473855 -29680027 + MIR3 SINE MIR 78 176 -32 367 293 18 42 chr20 42475292 42475459 -29678423 - MER58B DNA MER1_type -2 339 177 1810 160 52 17 chr20 42475551 42475913 -29677969 - THE1C LTR MaLR 0 375 1 627 276 92 0 chr20 42477748 42477987 -29675895 - Charlie5 DNA MER1_type 0 2624 2364 223 319 85 21 chr20 42478573 42478667 -29675215 + MIR SINE MIR 45 144 -64 564 214 17 0 chr20 42478874 42479047 -29674835 + CT-rich Low_complexity Low_complexity 1 176 0 1216 266 34 78 chr20 42479858 42480474 -29673408 + L1MC2 LINE L1 3544 4132 -2014 818 251 41 38 chr20 42480476 42480536 -29673346 + L1MC2 LINE L1 4713 4771 -1375 2186 117 0 3 chr20 42480536 42480835 -29673047 - AluSx SINE Alu -14 298 1 818 251 41 38 chr20 42480835 42481113 -29672769 + L1MC2 LINE L1 4771 5052 -1094 4388 184 54 26 chr20 42481121 42481288 -29672594 + L1MC2 LINE L1 5011 5172 -1172 2325 67 3 0 chr20 42481288 42481610 -29672272 + AluSp SINE Alu 1 323 0 4388 184 54 26 chr20 42481610 42482737 -29671145 + L1MC2 LINE L1 5172 6334 -10 2121 98 30 3 chr20 42482749 42483045 -29670837 + AluSx SINE Alu 1 304 -8 289 278 21 32 chr20 42483062 42483184 -29670698 - MER5B DNA MER1_type -56 133 13 314 188 0 0 chr20 42483207 42483276 -29670606 + LTR16A1 LTR ERVL 374 442 -15 971 171 18 0 chr20 42485962 42486126 -29667756 - AluJb SINE Alu -15 297 131 194 126 11 69 chr20 42486817 42486904 -29666978 + (TCC)n Simple_repeat Simple_repeat 2 83 0 627 253 220 10 chr20 42487613 42487972 -29665910 + MLT1C LTR MaLR 1 420 -47 401 330 62 17 chr20 42489840 42490131 -29663751 + L1ME1 LINE L1 65 368 -6028 315 328 23 0 chr20 42490512 42490683 -29663199 + L1MEc LINE L1 711 885 -5511 256 277 89 9 chr20 42490864 42490976 -29662906 + L1ME1 LINE L1 402 522 -5683 3332 253 51 22 chr20 42491116 42492362 -29661520 + L1ME1 LINE L1 598 1807 -4408 2002 134 0 0 chr20 42492362 42492652 -29661230 - AluSx SINE Alu -20 292 3 3332 253 51 22 chr20 42492652 42493011 -29660871 + L1ME1 LINE L1 1807 3935 -2280 968 156 6 6 chr20 42492999 42493179 -29660703 + L1MB3 LINE L1 5915 6094 -89 * 461 167 79 18 chr20 42493219 42493333 -29660549 + L1MB3 LINE L1 6061 6181 -2 * 742 244 38 53 chr20 42493330 42493649 -29660233 + L1ME1 LINE L1 3910 4223 -1992 * 1067 299 72 19 chr20 42493630 42494269 -29659613 + L1ME1 LINE L1 5544 6067 -168 757 279 196 21 chr20 42494286 42494931 -29658951 + L2 LINE L2 2538 3312 -1 472 337 130 0 chr20 42495063 42495247 -29658635 - MIR SINE MIR -17 245 38 314 248 199 0 chr20 42496187 42496348 -29657534 - L1ME1 LINE L1 -100 6066 5874 823 202 25 6 chr20 42496430 42496645 -29657237 + L1MB3 LINE L1 5948 6181 0 466 309 6 17 chr20 42497583 42497764 -29656118 - L1MC5 LINE L1 -104 7857 7679 693 307 48 35 chr20 42497956 42498353 -29655529 - L1MC5 LINE L1 -531 7430 7029 2152 91 35 0 chr20 42498568 42498854 -29655028 - AluSq SINE Alu -17 296 1 291 205 133 0 chr20 42499017 42499100 -29654782 - L1MC4 LINE L1 -136 7906 7813 351 297 109 0 chr20 42502245 42502383 -29651499 - MIR SINE MIR -19 243 91 23 0 0 0 chr20 42504078 42504101 -29649781 + GC_rich Low_complexity Low_complexity 1 23 0 326 251 115 20 chr20 42505613 42505731 -29648151 + MIR SINE MIR 33 162 -46 2122 78 58 3 chr20 42505885 42506180 -29647702 - AluY SINE Alu 0 311 1 421 169 0 0 chr20 42507629 42507706 -29646176 - MLT1F1 LTR MaLR 0 567 491 389 254 8 51 chr20 42508684 42508802 -29645080 - MER81 DNA DNA 0 114 2 233 289 0 0 chr20 42509414 42509466 -29644416 + (TG)n Simple_repeat Simple_repeat 2 53 0 441 232 136 26 chr20 42509779 42509934 -29643948 + MIR SINE MIR 21 192 -70 459 265 38 57 chr20 42509944 42510155 -29643727 + MLT1D LTR MaLR 3 209 -296 181 296 28 14 chr20 42511086 42511157 -29642725 - L2 LINE L2 -248 3065 2994 233 209 75 0 chr20 42512939 42513006 -29640876 + MLT1J LTR MaLR 99 170 -341 1166 257 26 12 chr20 42513268 42513610 -29640272 - MLT1A1 LTR MaLR 0 365 19 253 207 198 0 chr20 42513931 42514042 -29639840 + MLT1K LTR MaLR 431 563 -25 711 283 61 9 chr20 42515173 42515650 -29638232 - MER77 LTR ERV1 -4 601 58 1883 184 47 19 chr20 42516044 42516409 -29637473 - THE1C LTR MaLR 0 375 1 248 259 0 0 chr20 42517452 42517510 -29636372 - MARNA DNA Mariner -93 493 436 305 244 37 0 chr20 42517832 42517914 -29635968 - MLT1E2 LTR MaLR -418 208 124 276 294 0 0 chr20 42518027 42518095 -29635787 + MER21B LTR ERV1 19 86 -777 2299 258 92 8 chr20 42518106 42518858 -29635024 + MER21B LTR ERV1 49 863 0 396 0 0 0 chr20 42520105 42520149 -29633733 + (CA)n Simple_repeat Simple_repeat 2 45 0 2310 81 7 3 chr20 42521232 42521541 -29632341 + AluY SINE Alu 1 310 -1 22 0 0 0 chr20 42526128 42526150 -29627732 + AT_rich Low_complexity Low_complexity 1 22 0 234 256 26 13 chr20 42527486 42527564 -29626318 + C-rich Low_complexity Low_complexity 4 82 0 188 333 0 0 chr20 42528370 42528418 -29625464 + MIR SINE MIR 109 156 -106 298 283 11 22 chr20 42528474 42528566 -29625316 - MIR SINE MIR -85 177 87 1165 252 55 3 chr20 42528952 42529277 -29624605 - MER7A DNA MER2_type -6 340 1 421 345 40 0 chr20 42529872 42530046 -29623836 - MIR SINE MIR -32 230 50 252 0 0 0 chr20 42530097 42530125 -29623757 + (TG)n Simple_repeat Simple_repeat 1 28 0 246 304 47 70 chr20 42530379 42530636 -29623246 - MLT1E2-int LTR MaLR -7 1364 1114 448 242 113 36 chr20 42530871 42531065 -29622817 + L1M4 LINE L1 3415 3623 -2523 235 197 237 0 chr20 42531064 42531140 -29622742 + L1MD2 LINE L1 5606 5699 -543 * 661 244 80 20 chr20 42531382 42531583 -29622299 + L1MD2 LINE L1 6131 6343 -16 * 2260 245 49 43 chr20 42531578 42531589 -29622293 + L1M4 LINE L1 3602 3611 -2535 1305 173 98 29 chr20 42531589 42531866 -29622016 + AluJb SINE Alu 1 296 -16 2260 245 49 43 chr20 42531866 42532625 -29621257 + L1M4 LINE L1 3611 4377 -1769 268 273 53 45 chr20 42533057 42533114 -29620768 - L1ME1 LINE L1 0 6166 6111 1833 164 0 3 chr20 42533114 42533413 -29620469 + AluJo SINE Alu 3 300 -12 268 273 53 45 chr20 42533413 42533487 -29620395 - L1ME1 LINE L1 -55 6111 6034 675 301 54 30 chr20 42533489 42533550 -29620332 - L1ME1 LINE L1 -92 6074 6016 1950 118 52 0 chr20 42533550 42533838 -29620044 - AluSx SINE Alu -9 303 1 675 301 54 30 chr20 42533838 42534132 -29619750 - L1ME1 LINE L1 -150 6016 5716 727 150 0 0 chr20 42534132 42534245 -29619637 + AluSg/x SINE Alu 190 302 -10 646 283 80 4 chr20 42534249 42534486 -29619396 - L1ME1 LINE L1 -651 5708 5454 233 228 18 0 chr20 42534958 42535015 -29618867 - MLT1G1 LTR MaLR -312 283 226 3269 205 48 23 chr20 42535458 42536335 -29617547 - L1MB7 LINE L1 -7 6177 5279 1815 151 0 17 chr20 42536336 42536628 -29617254 - AluJb SINE Alu -11 301 15 789 262 105 20 chr20 42537779 42538122 -29615760 - MLT1A2 LTR MaLR -1 373 2 449 275 129 30 chr20 42538847 42539142 -29614740 - MLT1F1 LTR MaLR 0 567 244 418 242 121 0 chr20 42539972 42540121 -29613761 - MLT1F1 LTR MaLR -223 167 1 227 290 0 0 chr20 42540234 42540303 -29613579 + MER8 DNA MER2_type 111 179 -60 * 235 258 0 0 chr20 42540279 42540341 -29613541 + MER2 DNA MER2_type 283 344 -1 570 194 65 45 chr20 42541272 42541473 -29612409 + MLT1C LTR MaLR 32 236 -231 698 278 27 0 chr20 42542232 42542455 -29611427 - Tigger7 DNA MER2_type -314 419 191 825 231 54 0 chr20 42542670 42542856 -29611026 - Tigger7 DNA MER2_type -531 202 7 180 231 39 0 chr20 42545927 42545979 -29607903 - MIR SINE MIR -70 138 85 257 188 42 0 chr20 42546470 42546518 -29607364 - MIR SINE MIR -119 143 94 264 149 0 0 chr20 42546617 42546664 -29607218 + (AGGGGG)n Simple_repeat Simple_repeat 6 52 0 237 304 0 59 chr20 42547935 42548070 -29605812 + G-rich Low_complexity Low_complexity 4 130 0 185 135 68 27 chr20 42553594 42553668 -29600214 + (TCTCTG)n Simple_repeat Simple_repeat 6 82 0 703 284 90 35 chr20 42557725 42558070 -29595812 + MLT1B LTR MaLR 1 364 -26 416 238 62 25 chr20 42558510 42558689 -29595193 + MLT1C LTR MaLR 48 247 -258 2119 59 0 0 chr20 42558815 42559071 -29594811 - L1PA5 LINE L1 -1 6153 5898 197 190 103 17 chr20 42559785 42559843 -29594039 - L2 LINE L2 -23 3249 3187 * 297 279 58 0 chr20 42559823 42559927 -29593955 - MIR SINE MIR -124 138 29 216 184 0 0 chr20 42560616 42560654 -29593228 + (CA)n Simple_repeat Simple_repeat 1 38 0 282 243 0 0 chr20 42560786 42560860 -29593022 + G-rich Low_complexity Low_complexity 1 74 0 1732 231 86 25 chr20 42563400 42563890 -29589992 + MLT2B1 LTR ERVL 1 520 0 683 274 61 22 chr20 42568858 42569088 -29584794 + MIR SINE MIR 8 246 -16 22 0 0 0 chr20 42570348 42570370 -29583512 + GC_rich Low_complexity Low_complexity 1 22 0 392 330 84 0 chr20 42571053 42571232 -29582650 + MIR SINE MIR 43 236 -26 279 363 9 9 chr20 42571948 42572061 -29581821 + L3 LINE CR1 1417 1529 -48 495 244 154 5 chr20 42572088 42572289 -29581593 + MER113 DNA MER1_type? 61 291 -230 240 111 0 0 chr20 42572700 42572736 -29581146 + (T)n Simple_repeat Simple_repeat 1 36 0 487 66 0 0 chr20 42776607 42776668 -29377214 - Alu SINE Alu -249 62 2 504 259 7 14 chr20 42776797 42776944 -29376938 - MLT1C LTR MaLR -4 463 318 316 106 0 0 chr20 42776937 42776984 -29376898 + AluJb SINE Alu 190 236 -66 * 357 222 77 26 chr20 42777010 42777127 -29376755 - MLT1C LTR MaLR -156 311 189 546 332 29 13 chr20 42778681 42778919 -29374963 + L1ME3A LINE L1 5560 5801 -369 394 294 32 37 chr20 42779538 42779725 -29374157 + L1ME3A LINE L1 5852 6037 -133 270 149 27 40 chr20 42779743 42779817 -29374065 + L1ME3A LINE L1 6090 6162 -8 491 275 48 67 chr20 42779973 42780304 -29373578 + Charlie7 DNA MER1_type 320 644 -1968 2522 78 10 0 chr20 42780305 42780613 -29373269 + AluSp SINE Alu 3 313 0 384 226 139 15 chr20 42781062 42781199 -29372683 - MLT2E LTR ERVL -1 627 474 181 343 76 19 chr20 42781959 42782064 -29371818 + L2 LINE L2 2746 2856 -458 343 250 0 28 chr20 42782216 42782392 -29371490 + (CA)n Simple_repeat Simple_repeat 2 172 0 309 281 7 14 chr20 42782406 42782695 -29371187 + (CA)n Simple_repeat Simple_repeat 1 287 0 402 304 71 11 chr20 42786345 42786529 -29367353 + L1ME LINE L1 5468 5662 -508 384 231 36 147 chr20 42786528 42786753 -29367129 + L1ME3A LINE L1 5624 5823 -347 * 345 195 106 32 chr20 42786833 42786956 -29366926 + L1ME3A LINE L1 6027 6158 -12 616 309 31 35 chr20 42787275 42787531 -29366351 - MIR SINE MIR 0 262 8 1029 140 0 0 chr20 42787675 42787811 -29366071 + (TGGA)n Simple_repeat Simple_repeat 1 314 0 1029 140 0 0 chr20 42787811 42787989 -29365893 + (TGGA)n Simple_repeat Simple_repeat 1 178 0 432 268 36 7 chr20 42788147 42788285 -29365597 - MER5A DNA MER1_type -32 157 16 2167 141 0 6 chr20 42789506 42789819 -29364063 - AluJb SINE Alu -1 311 1 2117 268 49 34 chr20 42789839 42790694 -29363188 - L1ME2 LINE L1 -42 6122 5255 191 128 51 0 chr20 42790725 42790764 -29363118 + (TATG)n Simple_repeat Simple_repeat 2 42 0 1519 251 69 41 chr20 42790764 42790993 -29362889 - L1ME2 LINE L1 -904 5242 5021 2418 102 0 0 chr20 42790993 42791298 -29362584 - AluSx SINE Alu -7 305 1 1519 251 69 41 chr20 42791298 42791705 -29362177 - L1ME2 LINE L1 -1125 5021 4588 240 279 90 9 chr20 42793384 42793495 -29360387 - MIR SINE MIR -78 184 65 381 249 153 54 chr20 42794115 42794356 -29359526 + L2 LINE L2 2848 3112 -160 1497 239 133 53 chr20 42794427 42795091 -29358791 - MER21B LTR ERV1 -122 741 25 328 295 36 0 chr20 42795093 42795205 -29358677 + L2 LINE L2 3179 3294 -19 397 328 83 0 chr20 42796060 42796264 -29357618 - MER58A DNA MER1_type 0 224 4 403 295 33 74 chr20 42797691 42797908 -29355974 - MLT1H1 LTR MaLR -305 290 39 275 264 139 0 chr20 42799414 42799543 -29354339 - MIR3 SINE MIR -1 207 61 1792 210 22 0 chr20 42799646 42800003 -29353879 + MLT1A1 LTR MaLR 1 365 0 567 261 22 71 chr20 42801005 42801231 -29352651 - MER20 DNA MER1_type -4 215 1 308 174 11 0 chr20 42801921 42802013 -29351869 + (TG)n Simple_repeat Simple_repeat 2 94 0 530 198 6 0 chr20 42802036 42802198 -29351684 + (TG)n Simple_repeat Simple_repeat 2 164 0 357 205 0 0 chr20 42802219 42802336 -29351546 + (TG)n Simple_repeat Simple_repeat 2 118 0 549 231 0 2 chr20 42802414 42803354 -29350528 + (TG)n Simple_repeat Simple_repeat 1 937 0 236 254 17 0 chr20 42803875 42803934 -29349948 + C-rich Low_complexity Low_complexity 3 62 0 237 307 85 28 chr20 42804842 42805018 -29348864 - L1ME LINE L1 -305 5816 5631 2057 113 0 57 chr20 42805491 42805820 -29348062 - AluSx SINE Alu 0 312 1 189 0 0 0 chr20 42805971 42805992 -29347890 + (T)n Simple_repeat Simple_repeat 1 21 0 183 270 79 16 chr20 42809192 42809255 -29344627 + L2 LINE L2 3202 3268 -4 257 224 208 48 chr20 42809669 42809794 -29344088 + MIR SINE MIR 10 154 -108 233 307 13 0 chr20 42810008 42810083 -29343799 + GA-rich Low_complexity Low_complexity 3 78 0 184 377 41 32 chr20 42811700 42811920 -29341962 + MIR SINE MIR 23 244 -18 2796 84 14 3 chr20 42812084 42812455 -29341427 + THE1C LTR MaLR 1 375 0 391 305 31 8 chr20 42812515 42812643 -29341239 - L2 LINE L2 -18 3295 3165 2507 63 0 0 chr20 42812792 42813091 -29340791 - AluY SINE Alu -12 299 1 808 77 92 0 chr20 42813303 42813433 -29340449 - L1MB7 LINE L1 -9 6175 6034 307 152 51 38 chr20 42813433 42813512 -29340370 - L1MD2 LINE L1 -229 6130 6051 729 298 135 28 chr20 42813512 42814120 -29339762 - MER20B DNA MER1_type -110 673 1 496 194 6 6 chr20 42814222 42814382 -29339500 + (TGGA)n Simple_repeat Simple_repeat 1 160 0 305 198 12 0 chr20 42814412 42814498 -29339384 + (TGGA)n Simple_repeat Simple_repeat 2 88 0 686 231 26 70 chr20 42814712 42814941 -29338941 + MER20 DNA MER1_type 1 219 0 447 182 15 57 chr20 42815785 42816067 -29337815 + (ATGGTG)n Simple_repeat Simple_repeat 1 270 0 320 283 0 11 chr20 42816043 42816223 -29337659 + (TGG)n Simple_repeat Simple_repeat 1 178 0 * 316 182 23 57 chr20 42816198 42816374 -29337508 + (ATGGTG)n Simple_repeat Simple_repeat 1 170 0 * 317 296 11 0 chr20 42816375 42816463 -29337419 + (TGG)n Simple_repeat Simple_repeat 1 89 0 553 188 0 33 chr20 42816464 42816645 -29337237 + (ATGGTG)n Simple_repeat Simple_repeat 2 176 0 423 232 11 17 chr20 42816718 42816895 -29336987 + (ATGGTG)n Simple_repeat Simple_repeat 4 179 0 271 270 0 14 chr20 42816895 42816969 -29336913 + (ATG)n Simple_repeat Simple_repeat 3 75 0 403 278 11 0 chr20 42816974 42817150 -29336732 + (TGG)n Simple_repeat Simple_repeat 3 180 0 289 185 0 0 chr20 42821134 42821188 -29332694 - MER67D-int LTR ERV1 -4485 451 398 2260 137 28 14 chr20 42821266 42821625 -29332257 + THE1B LTR MaLR 1 364 0 274 247 14 0 chr20 42821901 42821974 -29331908 - MER67D-int LTR ERV1 -4846 90 17 662 203 166 0 chr20 42822025 42822212 -29331670 - MER67D LTR ERV1 0 514 297 424 139 38 0 chr20 42822220 42822299 -29331583 - MER67D LTR ERV1 -431 83 2 1700 197 0 23 chr20 42824908 42825218 -29328664 + AluSx SINE Alu 1 303 -9 278 333 53 21 chr20 42825366 42825555 -29328327 - MIR SINE MIR -2 260 66 520 138 0 12 chr20 42825826 42825906 -29327976 + AluJ/FLAM SINE Alu 6 84 -228 1782 249 39 24 chr20 42826164 42826697 -29327185 - MER77 LTR ERV1 -11 594 54 14462 160 25 10 chr20 42826754 42830715 -29323167 - L1MA3 LINE L1 0 7724 3700 1665 100 0 15 chr20 42830718 42830988 -29322894 - L1MA3 LINE L1 -4005 3560 3295 1167 260 49 3 chr20 42831377 42831742 -29322140 + MER63 DNA MER1_type 673 1054 -6 429 179 0 0 chr20 42832076 42832199 -29321683 + (CA)n Simple_repeat Simple_repeat 1 123 0 2322 93 3 44 chr20 42832499 42832820 -29321062 - AluSx SINE Alu -4 308 1 546 144 22 44 chr20 42833796 42833977 -29319905 + CT-rich Low_complexity Low_complexity 2 178 0 182 146 0 24 chr20 42834002 42834043 -29319839 + (TCTCCC)n Simple_repeat Simple_repeat 6 45 0 203 176 0 0 chr20 42834711 42834745 -29319137 + (TG)n Simple_repeat Simple_repeat 2 35 0 336 258 157 13 chr20 42834818 42834977 -29318905 - MIR SINE MIR -59 203 22 538 305 33 56 chr20 42837135 42837529 -29316353 - L1MEc LINE L1 -4593 1803 1419 2400 18 14 0 chr20 42837552 42837829 -29316053 - L1PA4 LINE L1 -1 6154 5874 1240 14 0 0 chr20 42837829 42837976 -29315906 + L1P1 LINE L1 5673 5819 -336 806 264 107 29 chr20 42837985 42838535 -29315347 - L1MEc LINE L1 -4829 1386 839 428 284 162 13 chr20 42838554 42838783 -29315099 - L1MEc LINE L1 -6091 305 43 588 224 50 45 chr20 42839493 42839672 -29314210 + MER20 DNA MER1_type 6 185 -34 650 309 60 17 chr20 42841150 42841383 -29312499 - MIR SINE MIR -17 245 3 25 0 0 0 chr20 42842014 42842039 -29311843 + GC_rich Low_complexity Low_complexity 1 25 0 319 213 0 40 chr20 42842121 42842196 -29311686 + MLT1H LTR MaLR 405 476 -73 1622 206 13 7 chr20 42844955 42845256 -29308626 + AluJo SINE Alu 1 303 -9 1156 211 4 0 chr20 42845368 42845615 -29308267 - L1M4 LINE L1 -1072 5074 4827 209 274 20 0 chr20 42847189 42847240 -29306642 + MER5A DNA MER1_type 10 61 -128 305 49 0 0 chr20 42847665 42847706 -29306176 + MADE1 DNA Mariner 1 41 -39 310 234 215 0 chr20 42847717 42847824 -29306058 + L1ME LINE L1 5598 5727 -437 352 328 17 0 chr20 42848015 42848131 -29305751 - MIR SINE MIR -50 212 95 301 313 38 44 chr20 42848212 42848372 -29305510 - MER5A DNA MER1_type -22 167 9 725 270 140 31 chr20 42848430 42848765 -29305117 + L1ME2 LINE L1 5595 5973 -191 2412 86 0 0 chr20 42848765 42849056 -29304826 + AluSg SINE Alu 1 291 -19 725 270 140 31 chr20 42849056 42849076 -29304806 + L1ME2 LINE L1 5973 5989 -175 363 273 8 8 chr20 42850004 42850136 -29303746 + (TTG)n Simple_repeat Simple_repeat 3 134 0 201 255 0 0 chr20 42850138 42850236 -29303646 + (TGG)n Simple_repeat Simple_repeat 1 98 0 261 279 0 0 chr20 42850285 42850464 -29303418 + (TGG)n Simple_repeat Simple_repeat 1 179 0 553 255 0 0 chr20 42850501 42850908 -29302974 + (TTG)n Simple_repeat Simple_repeat 1 407 0 521 298 63 57 chr20 42850959 42851275 -29302607 - L2 LINE L2 -30 3283 2966 184 303 123 16 chr20 42853529 42853651 -29300231 - L2 LINE L2 -5 3267 3133 325 164 28 23 chr20 42853857 42853948 -29299934 + Alu SINE Alu 248 300 -2 2360 115 0 0 chr20 42853967 42854271 -29299611 + AluSx SINE Alu 1 304 -8 248 309 9 82 chr20 42854377 42854465 -29299417 - L1MC4 LINE L1 -1 8041 7948 2027 131 7 13 chr20 42854465 42854763 -29299119 + AluJb SINE Alu 1 296 -16 248 309 9 82 chr20 42854763 42854907 -29298975 - L1MC4 LINE L1 -94 7948 7826 542 251 82 24 chr20 42854935 42855142 -29298740 - L1ME2 LINE L1 -11 6153 5935 291 225 0 0 chr20 42855215 42855286 -29298596 - L1ME2 LINE L1 -437 5727 5657 457 308 54 30 chr20 42855330 42855773 -29298109 - L1MEc LINE L1 -3758 2457 2042 6338 36 0 0 chr20 42855827 42856567 -29297315 + L1PA5 LINE L1 5415 6154 0 1300 130 74 9 chr20 42857007 42857223 -29296659 + MER30 DNA MER1_type 1 230 0 196 320 29 10 chr20 42857596 42857699 -29296183 + MIR SINE MIR 35 139 -69 182 204 82 0 chr20 42862857 42862906 -29290976 - MIR SINE MIR -85 123 71 1596 182 95 3 chr20 42865939 42866286 -29287596 + L1MC3 LINE L1 7405 7783 -2 2240 161 40 31 chr20 42869078 42869500 -29284382 - MSTB LTR MaLR 0 426 1 4101 150 53 48 chr20 42872212 42872991 -29280891 - LTR39 LTR ERV1 0 783 1 243 235 0 15 chr20 42874170 42874238 -29279644 + CT-rich Low_complexity Low_complexity 1 67 0 569 309 61 11 chr20 42875295 42875546 -29278336 - L1ME3A LINE L1 0 6170 5902 1657 186 10 17 chr20 42875546 42875842 -29278040 - AluJo SINE Alu -18 294 1 569 309 61 11 chr20 42875842 42875868 -29278014 - L1ME3A LINE L1 -268 5902 5879 749 144 42 5 chr20 42876760 42877354 -29276528 + (TCCA)n Simple_repeat Simple_repeat 1 615 0 202 312 65 0 chr20 42878511 42878588 -29275294 + MIR SINE MIR 102 183 -79 613 309 62 5 chr20 42878675 42878885 -29274997 + MIR SINE MIR 19 240 -22 230 262 33 0 chr20 42879961 42880022 -29273860 - tRNA-Thr-ACT tRNA tRNA -2 75 13 380 208 29 46 chr20 42882757 42882836 -29271046 + L1MD3 LINE L1 7673 7752 -236 1887 150 7 0 chr20 42882836 42883130 -29270752 - AluJb SINE Alu -16 296 1 380 208 29 46 chr20 42883130 42883169 -29270713 + L1MD3 LINE L1 7752 7986 -2 280 337 0 0 chr20 42884313 42884402 -29269480 - MIR SINE MIR -93 169 81 1445 12 0 12 chr20 42884843 42885009 -29268873 - L1PA3 LINE L1 0 6155 5992 237 265 49 10 chr20 42885431 42885533 -29268349 - L1ME3A LINE L1 -5 6165 6060 2081 122 3 0 chr20 42885603 42885897 -29267985 - AluSx SINE Alu -17 295 1 2088 116 0 3 chr20 42886441 42886733 -29267149 + AluSx SINE Alu 1 291 -21 451 122 22 11 chr20 42886734 42886824 -29267058 + G-rich Low_complexity Low_complexity 4 94 0 827 163 8 0 chr20 42886835 42886964 -29266918 + FLAM_C SINE Alu 1 130 -3 917 174 0 0 chr20 42888180 42888352 -29265530 - AluSg/x SINE Alu 0 305 134 1669 103 8 0 chr20 42888352 42888620 -29265262 - AluSx SINE Alu 0 312 59 463 43 43 0 chr20 42938996 42939065 -29214817 + (TCTCCC)n Simple_repeat Simple_repeat 5 76 0 405 277 44 29 chr20 42940186 42940323 -29213559 + MIR SINE MIR 91 229 -33 398 300 38 57 chr20 42941538 42941748 -29212134 + L2 LINE L2 2632 2837 -477 229 267 129 40 chr20 42941761 42941862 -29212020 + L2 LINE L2 3160 3269 -3 198 410 0 0 chr20 42942028 42942111 -29211771 - L2 LINE L2 -21 3251 3169 553 296 111 36 chr20 42943619 42944153 -29209729 - L1ME4a LINE L1 -12 6109 5536 225 83 0 0 chr20 42944388 42944424 -29209458 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 10584 25 3 105 chr20 42944424 42945926 -29207956 - SVA Other Other -18 1368 20 209 270 27 14 chr20 42946585 42946659 -29207223 + (TATG)n Simple_repeat Simple_repeat 2 76 0 210 128 0 0 chr20 42946832 42946871 -29207011 + (CA)n Simple_repeat Simple_repeat 2 40 0 195 194 215 54 chr20 42947171 42947264 -29206618 - L2 LINE L2 -2 3311 3204 293 325 0 0 chr20 42947683 42947852 -29206030 + (GGGTG)n Simple_repeat Simple_repeat 4 172 0 * 303 349 0 6 chr20 42947787 42947959 -29205923 + (TGGG)n Simple_repeat Simple_repeat 3 173 0 182 259 121 0 chr20 42950448 42950506 -29203376 - MER5A DNA MER1_type -121 68 4 735 211 99 34 chr20 42950587 42950881 -29203001 + L1MCa LINE L1 2063 2375 -4051 198 0 0 0 chr20 42952941 42952963 -29200919 + (T)n Simple_repeat Simple_repeat 1 22 0 282 295 115 0 chr20 42953353 42953475 -29200407 + L1MD1 LINE L1 6106 6241 -1 188 321 5 83 chr20 42954843 42955036 -29198846 - L2 LINE L2 -263 3050 2873 402 294 63 0 chr20 42958814 42958962 -29194920 - MIR SINE MIR -61 147 30 285 299 10 21 chr20 42960093 42960190 -29193692 - MIR SINE MIR -73 135 40 218 366 74 20 chr20 42960656 42960858 -29193024 - L2 LINE L2 -250 3063 2851 948 294 105 22 chr20 42961637 42962045 -29191837 - MLT1K LTR MaLR -110 478 37 553 181 14 0 chr20 42962530 42962668 -29191214 + (TGGA)n Simple_repeat Simple_repeat 2 141 0 1890 165 0 13 chr20 42962680 42962983 -29190899 + AluJo SINE Alu 1 299 -13 222 118 0 0 chr20 42962984 42963018 -29190864 + (TGGA)n Simple_repeat Simple_repeat 1 34 0 820 144 29 0 chr20 42963045 42963218 -29190664 + (TGGA)n Simple_repeat Simple_repeat 1 178 0 776 166 21 3 chr20 42963235 42963578 -29190304 + (TGGA)n Simple_repeat Simple_repeat 1 349 0 550 222 12 0 chr20 42963615 42963782 -29190100 + (TGGA)n Simple_repeat Simple_repeat 4 172 0 773 235 83 60 chr20 42964366 42964715 -29189167 + MLT1D LTR MaLR 119 475 -30 713 254 39 19 chr20 42966017 42966277 -29187605 - MER33 DNA MER1_type 0 324 60 824 249 14 5 chr20 42966303 42966520 -29187362 + MER58A DNA MER1_type 6 224 0 375 294 63 53 chr20 42968130 42968594 -29185288 - L2 LINE L2 -82 3231 2733 504 218 35 0 chr20 42969128 42969302 -29184580 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 405 130 74 9 chr20 42969303 42969534 -29184348 + (TAGA)n Simple_repeat Simple_repeat 1 246 0 218 175 50 0 chr20 42969592 42969672 -29184210 + (TGGA)n Simple_repeat Simple_repeat 3 86 0 476 96 32 11 chr20 42969707 42969801 -29184081 + (TGGA)n Simple_repeat Simple_repeat 4 99 0 706 241 170 18 chr20 42970026 42970425 -29183457 - MLT1C LTR MaLR -1 466 7 523 237 130 12 chr20 42970771 42970940 -29182942 - MER5A DNA MER1_type 0 189 1 640 210 12 0 chr20 42973602 42973769 -29180113 + (TGGA)n Simple_repeat Simple_repeat 4 172 0 285 156 0 0 chr20 42973772 42973817 -29180065 + GA-rich Low_complexity Low_complexity 4 48 0 777 153 11 6 chr20 42973825 42974002 -29179880 + (TGGA)n Simple_repeat Simple_repeat 1 178 0 182 250 0 12 chr20 42974017 42974101 -29179781 + GA-rich Low_complexity Low_complexity 2 84 0 739 221 60 115 chr20 42976352 42976701 -29177181 - L1MB7 LINE L1 -9 6175 5846 528 281 0 0 chr20 42977806 42978089 -29175793 + (TG)n Simple_repeat Simple_repeat 1 283 0 405 273 0 0 chr20 42978119 42978269 -29175613 + (TG)n Simple_repeat Simple_repeat 2 151 0 203 316 0 53 chr20 42981322 42981493 -29172389 + (GGGTG)n Simple_repeat Simple_repeat 3 164 0 657 217 0 0 chr20 42982724 42982904 -29170978 + (TG)n Simple_repeat Simple_repeat 1 180 0 312 341 47 59 chr20 42982909 42982985 -29170897 + L1MC4 LINE L1 6588 6663 -1379 1627 242 26 0 chr20 42982985 42983324 -29170558 - MER7A DNA MER2_type 0 346 1 312 341 47 59 chr20 42983324 42983417 -29170465 + L1MC4 LINE L1 6663 6755 -1287 870 157 0 0 chr20 42983552 42983776 -29170106 + (TG)n Simple_repeat Simple_repeat 1 224 0 189 94 0 0 chr20 42984291 42984323 -29169559 + (T)n Simple_repeat Simple_repeat 1 32 0 1985 124 40 3 chr20 42985351 42985650 -29168232 - AluSx SINE Alu 0 312 3 806 279 87 14 chr20 42988195 42988564 -29165318 + MLT1D LTR MaLR 5 400 -105 2190 88 0 36 chr20 42988788 42989095 -29164787 + AluSg SINE Alu 1 296 -14 188 276 41 81 chr20 42989406 42989529 -29164353 + MIR3 SINE MIR 4 121 -87 423 217 204 0 chr20 42990113 42990265 -29163617 - MER20 DNA MER1_type -10 209 27 1041 224 30 29 chr20 42992404 42992833 -29161049 - MLT1C LTR MaLR 0 467 1 229 381 25 0 chr20 42994467 42994585 -29159297 - L2 LINE L2 -10 3303 3183 250 253 0 60 chr20 42996093 42996176 -29157706 - Charlie8 DNA MER1_type -2236 181 104 641 259 85 10 chr20 42996192 42996393 -29157489 - MER20 DNA MER1_type 0 219 4 184 350 68 0 chr20 42998656 42998773 -29155109 + L2 LINE L2 3147 3271 -1 1210 170 8 38 chr20 42999091 42999326 -29154556 - MER1B DNA MER1_type -2 337 110 405 241 82 20 chr20 43000226 43000435 -29153447 + MER5C DNA MER1_type 6 307 -17 2006 123 7 3 chr20 43000744 43001045 -29152837 - AluSx SINE Alu -9 303 2 237 261 58 0 chr20 43001710 43001779 -29152103 + MIR SINE MIR 58 130 -78 292 281 124 33 chr20 43002239 43002360 -29151522 - L2 LINE L2 0 3272 3141 1457 218 141 0 chr20 43002361 43002457 -29151425 - MLT1D LTR MaLR 0 505 424 2281 124 7 79 chr20 43002457 43002861 -29151021 + THE1C LTR MaLR 1 375 0 1457 218 141 0 chr20 43002861 43003204 -29150678 - MLT1D LTR MaLR -81 424 4 218 278 151 8 chr20 43003249 43003375 -29150507 - L2 LINE L2 -201 3112 2969 252 233 33 0 chr20 43003998 43004058 -29149824 + C-rich Low_complexity Low_complexity 3 64 0 2305 71 0 0 chr20 43005486 43005811 -29148071 - AluY SINE Alu 0 311 6 4988 129 30 3 chr20 43005899 43006810 -29147072 - L1PB3 LINE L1 -2 6152 5219 884 202 226 0 chr20 43006810 43007102 -29146780 - MSTD LTR MaLR -38 358 1 1987 136 7 0 chr20 43008104 43008405 -29145477 + AluSx SINE Alu 7 309 -3 1965 131 3 16 chr20 43008913 43008946 -29144936 - AluSx SINE Alu -1 311 279 213 65 0 0 chr20 43008946 43008977 -29144905 + (TTTG)n Simple_repeat Simple_repeat 1 31 0 1965 131 3 16 chr20 43008977 43009255 -29144627 - AluSx SINE Alu -33 279 4 217 316 34 17 chr20 43011922 43012099 -29141783 + (GAGTG)n Simple_repeat Simple_repeat 1 180 0 245 195 49 12 chr20 43012365 43012447 -29141435 + LTR65 LTR ERV1 585 669 0 397 309 77 58 chr20 43013865 43014227 -29139655 + MLT1I LTR MaLR 41 409 0 232 160 160 0 chr20 43014302 43014352 -29139530 + MER103 DNA DNA 67 124 -42 1724 178 3 16 chr20 43016299 43016608 -29137274 + AluJo SINE Alu 1 305 -7 236 206 16 16 chr20 43017205 43017268 -29136614 + G-rich Low_complexity Low_complexity 5 67 0 306 356 30 0 chr20 43017895 43018027 -29135855 + MIR SINE MIR 112 247 -15 454 193 0 73 chr20 43018037 43018229 -29135653 + (CACCAT)n Simple_repeat Simple_repeat 3 180 0 356 182 0 88 chr20 43018289 43018568 -29135314 + (CACCAT)n Simple_repeat Simple_repeat 1 254 0 357 294 0 0 chr20 43018574 43018927 -29134955 + (CAT)n Simple_repeat Simple_repeat 1 353 0 1991 179 39 55 chr20 43018962 43019398 -29134484 - MSTB1 LTR MaLR -3 429 1 302 349 62 21 chr20 43019981 43020173 -29133709 + MIR SINE MIR 36 235 -27 1250 209 104 82 chr20 43021457 43021959 -29131923 - L1MC2 LINE L1 -11 6333 5821 204 364 16 39 chr20 43021998 43022127 -29131755 - L2 LINE L2 -3 3269 3144 188 259 56 19 chr20 43022532 43022586 -29131296 - L2 LINE L2 -1034 2280 2225 397 275 53 6 chr20 43023897 43024068 -29129814 + L2 LINE L2 2836 3014 -299 453 181 0 0 chr20 43025119 43025213 -29128669 + GA-rich Low_complexity Low_complexity 1 94 0 277 246 29 0 chr20 43026117 43026186 -29127696 + MIR3 SINE MIR 123 193 -15 555 221 0 0 chr20 43026743 43026847 -29127035 - L1MB5 LINE L1 0 6174 6071 257 346 93 42 chr20 43027661 43028016 -29125866 + L2 LINE L2 2815 3187 -85 397 167 0 22 chr20 43028061 43028151 -29125731 + GA-rich Low_complexity Low_complexity 3 90 0 199 296 56 0 chr20 43029021 43029092 -29124790 + L2 LINE L2 3196 3270 -2 245 372 115 5 chr20 43029189 43029380 -29124502 - MIR SINE MIR -1 261 50 2086 126 7 0 chr20 43032400 43032702 -29121180 + AluSx SINE Alu 2 305 -7 2348 57 0 10 chr20 43032968 43033264 -29120618 - AluY SINE Alu -18 293 1 266 114 0 0 chr20 43033264 43033308 -29120574 - Alu SINE Alu -255 44 1 485 252 126 13 chr20 43035434 43035593 -29118289 + MER45A DNA AcHobo 1 177 -1 193 183 33 0 chr20 43035752 43035812 -29118070 + GA-rich Low_complexity Low_complexity 1 62 0 713 211 0 4 chr20 43035826 43036079 -29117803 + GA-rich Low_complexity Low_complexity 1 251 0 210 303 202 0 chr20 43037868 43037957 -29115925 - MIR SINE MIR -37 225 119 180 331 88 38 chr20 43038089 43038249 -29115633 + MIR SINE MIR 66 233 -29 2165 88 10 26 chr20 43038630 43038937 -29114945 + AluY SINE Alu 1 302 -9 464 284 78 69 chr20 43039003 43039604 -29114278 + L1ME3 LINE L1 1255 1877 -4670 1930 111 0 0 chr20 43039604 43039865 -29114017 - AluSg SINE Alu -13 297 37 464 284 78 69 chr20 43039865 43039963 -29113919 + L1ME3 LINE L1 1877 1973 -4574 425 347 90 43 chr20 43039966 43040391 -29113491 + L1ME3 LINE L1 2038 2494 -4046 1916 294 85 21 chr20 43040422 43041249 -29112633 + L1ME3 LINE L1 2591 3537 -3003 1993 147 7 0 chr20 43041249 43041548 -29112334 + AluSx SINE Alu 1 301 -11 1916 294 85 21 chr20 43041548 43042068 -29111814 + L1ME3 LINE L1 3537 4023 -2517 850 252 127 48 chr20 43042107 43042643 -29111239 + L1ME3 LINE L1 4516 5093 -1447 648 219 19 12 chr20 43042674 43042834 -29111048 - MER20 DNA MER1_type -58 161 1 467 206 80 55 chr20 43043083 43043256 -29110626 + MER58 DNA MER1_type 36 2419 -1 607 291 93 19 chr20 43043268 43043521 -29110361 + L1ME3 LINE L1 5280 5564 -976 2173 119 7 0 chr20 43043521 43043824 -29110058 + AluSx SINE Alu 2 306 -6 607 291 93 19 chr20 43043824 43043893 -29109989 + L1ME3 LINE L1 5564 5626 -914 * 655 334 70 3 chr20 43043885 43044214 -29109668 + L1ME3 LINE L1 5910 6260 -296 1489 202 83 2 chr20 43045318 43045714 -29108168 + MLT1C LTR MaLR 6 433 -34 325 137 68 29 chr20 43046090 43046375 -29107507 + (CA)n Simple_repeat Simple_repeat 1 296 0 2743 80 8 0 chr20 43046386 43046738 -29107144 - THE1A LTR MaLR 0 355 1 227 88 53 18 chr20 43046742 43046799 -29107083 + (CA)n Simple_repeat Simple_repeat 1 59 0 498 105 64 23 chr20 43046830 43047002 -29106880 + (CA)n Simple_repeat Simple_repeat 1 179 0 203 156 52 21 chr20 43047022 43047118 -29106764 + (CA)n Simple_repeat Simple_repeat 1 99 0 243 139 35 35 chr20 43047201 43047287 -29106595 + (CA)n Simple_repeat Simple_repeat 1 86 0 425 353 79 29 chr20 43049442 43049785 -29104097 - L2 LINE L2 -32 3281 2922 475 367 0 6 chr20 43050381 43050561 -29103321 + (TG)n Simple_repeat Simple_repeat 1 179 0 26 50 0 0 chr20 43051115 43051155 -29102727 + AT_rich Low_complexity Low_complexity 1 40 0 459 235 108 0 chr20 43051237 43051403 -29102479 + MER20 DNA MER1_type 33 216 -3 207 134 0 90 chr20 43053368 43053435 -29100447 + (CACAG)n Simple_repeat Simple_repeat 2 62 0 194 191 21 43 chr20 43055004 43055051 -29098831 - MER5A DNA MER1_type -89 100 55 195 42 0 0 chr20 43057040 43057064 -29096818 + (GGA)n Simple_repeat Simple_repeat 1 24 0 228 220 44 22 chr20 43057353 43057444 -29096438 - MLT1K LTR MaLR -355 233 141 257 312 75 11 chr20 43057685 43057778 -29096104 + MIR3 SINE MIR 57 155 -53 187 346 109 0 chr20 43057987 43058088 -29095794 - MIR SINE MIR -51 211 100 188 353 16 42 chr20 43058160 43058350 -29095532 + L2 LINE L2 2877 3061 -211 195 69 0 0 chr20 43059661 43059690 -29094192 + (CA)n Simple_repeat Simple_repeat 2 30 0 363 324 46 12 chr20 43059719 43059892 -29093990 + (CATG)n Simple_repeat Simple_repeat 1 179 0 371 200 126 11 chr20 43060724 43060819 -29093063 - MER5A DNA MER1_type -66 123 18 2465 65 0 0 chr20 43062075 43062382 -29091500 + AluY SINE Alu 4 310 -1 485 323 82 22 chr20 43062420 43062468 -29091414 - L1ME4a LINE L1 -105 6016 5972 2224 116 3 0 chr20 43062468 43062778 -29091104 - AluSq SINE Alu 0 313 3 485 323 82 22 chr20 43062778 43062812 -29091070 - L1ME4a LINE L1 -149 5972 5941 2117 131 7 0 chr20 43062812 43063117 -29090765 + AluSx SINE Alu 1 307 -5 485 323 82 22 chr20 43063117 43063448 -29090434 - L1ME4a LINE L1 -180 5941 5577 262 330 27 58 chr20 43063532 43063720 -29090162 - MIR SINE MIR -32 230 49 738 274 111 31 chr20 43063824 43064254 -29089628 - L1ME4a LINE L1 -744 5402 4998 4485 88 12 3 chr20 43065984 43066588 -29087294 - L1PA11 LINE L1 -3 6171 5563 847 210 113 0 chr20 43066894 43067089 -29086793 - MER58A DNA MER1_type -2 222 6 268 228 109 10 chr20 43068138 43068239 -29085643 - MLT1J1 LTR MaLR -52 394 284 567 259 44 0 chr20 43068252 43068410 -29085472 - MLT1J2 LTR MaLR -282 168 4 280 363 170 0 chr20 43068532 43068714 -29085168 + L2 LINE L2 3088 3300 -13 204 97 0 0 chr20 43068714 43068745 -29085137 + (TGAG)n Simple_repeat Simple_repeat 1 31 0 375 283 0 0 chr20 43069112 43069289 -29084593 + (CA)n Simple_repeat Simple_repeat 2 178 0 268 279 6 23 chr20 43069318 43069490 -29084392 + (CA)n Simple_repeat Simple_repeat 2 170 0 836 66 9 0 chr20 43069536 43069642 -29084240 - AluSq/x SINE Alu -206 107 1 245 203 94 102 chr20 43070455 43070502 -29083380 + MIR SINE MIR 105 151 -111 2303 101 0 3 chr20 43070502 43070808 -29083074 + AluSx SINE Alu 1 305 -7 245 203 94 102 chr20 43070808 43070888 -29082994 + MIR SINE MIR 151 231 -31 547 231 82 34 chr20 43072108 43072316 -29081566 - MLT1E1 LTR MaLR -3 651 434 363 136 0 0 chr20 43073941 43074000 -29079882 + (T)n Simple_repeat Simple_repeat 1 59 0 210 247 0 0 chr20 43074491 43074539 -29079343 - MIR SINE MIR -115 147 101 566 211 30 0 chr20 43074875 43075008 -29078874 - MER45A DNA AcHobo 0 178 42 205 118 39 20 chr20 43075751 43075802 -29078080 + GA-rich Low_complexity Low_complexity 2 53 0 183 80 0 0 chr20 43076012 43076037 -29077845 + (CATA)n Simple_repeat Simple_repeat 3 27 0 342 253 55 0 chr20 43076037 43076128 -29077754 + MER20 DNA MER1_type 52 147 -72 1759 177 49 0 chr20 43078601 43078945 -29074937 - MLT1B LTR MaLR 0 390 30 430 266 24 24 chr20 43081184 43081308 -29072574 + MLT1I LTR MaLR 29 152 -257 395 256 47 18 chr20 43081373 43081532 -29072350 + MLT1I LTR MaLR 280 407 -2 283 281 231 0 chr20 43081533 43081654 -29072228 - L1MC/D LINE L1 -2068 5740 5592 1995 175 42 25 chr20 43082061 43082600 -29071282 - MLT2A2 LTR ERVL -8 546 1 490 248 87 44 chr20 43083481 43083687 -29070195 + MER20 DNA MER1_type 3 217 -2 223 192 19 0 chr20 43085052 43085104 -29068778 + (TG)n Simple_repeat Simple_repeat 1 53 0 300 206 19 19 chr20 43085135 43085295 -29068587 + (TG)n Simple_repeat Simple_repeat 1 160 0 375 296 12 6 chr20 43085337 43085499 -29068383 + (TG)n Simple_repeat Simple_repeat 1 163 0 201 182 23 0 chr20 43085518 43085562 -29068320 + (TG)n Simple_repeat Simple_repeat 1 45 0 242 262 27 0 chr20 43085582 43085731 -29068151 + (TG)n Simple_repeat Simple_repeat 2 154 0 2367 69 0 25 chr20 43086509 43086826 -29067056 - AluY SINE Alu -2 309 1 198 0 0 0 chr20 43086888 43086910 -29066972 + (TGGGGG)n Simple_repeat Simple_repeat 3 24 0 247 151 93 0 chr20 43089323 43089409 -29064473 + (CCCTG)n Simple_repeat Simple_repeat 3 96 0 318 170 21 75 chr20 43089488 43089676 -29064206 + (CCTG)n Simple_repeat Simple_repeat 3 180 0 526 372 28 0 chr20 43090286 43090504 -29063378 + MIR SINE MIR 37 260 -2 990 260 99 23 chr20 43090650 43091004 -29062878 - L1ME3A LINE L1 -9 6161 5781 3869 189 33 17 chr20 43091029 43091729 -29062153 + L1MB7 LINE L1 4727 5415 -769 2111 128 0 3 chr20 43091729 43092042 -29061840 + AluSx SINE Alu 1 312 0 3869 189 33 17 chr20 43092042 43092762 -29061120 + L1MB7 LINE L1 5415 6165 -19 835 280 69 0 chr20 43092782 43093057 -29060825 - L1ME3A LINE L1 -422 5748 5455 245 397 23 0 chr20 43094034 43094165 -29059717 + (CATG)n Simple_repeat Simple_repeat 3 136 0 * 301 400 6 0 chr20 43094108 43094283 -29059599 + (TG)n Simple_repeat Simple_repeat 2 177 0 234 310 0 26 chr20 43094327 43094440 -29059442 + (TG)n Simple_repeat Simple_repeat 1 110 0 513 333 25 0 chr20 43096496 43096700 -29057182 - MER58A DNA MER1_type -15 209 1 2097 125 0 3 chr20 43098349 43098646 -29055236 + AluSg SINE Alu 1 296 -14 2068 123 19 13 chr20 43098822 43099131 -29054751 - AluSx SINE Alu -1 311 1 280 100 150 0 chr20 43099569 43099629 -29054253 - L1PA16 LINE L1 -7 6159 6091 212 331 35 55 chr20 43100628 43100773 -29053109 - MIR SINE MIR -79 183 42 807 236 91 5 chr20 43100905 43101104 -29052778 + MER58A DNA MER1_type 9 224 0 484 193 92 66 chr20 43103392 43103584 -29050298 - MLT1C LTR MaLR -193 197 6 2611 128 36 5 chr20 43103621 43104034 -29049848 + MSTB LTR MaLR 1 426 0 575 167 12 11 chr20 43104363 43104722 -29049160 + (TGG)n Simple_repeat Simple_repeat 1 359 0 1832 185 46 14 chr20 43106578 43106929 -29046953 - MLT1A1 LTR MaLR -3 362 1 1643 179 34 0 chr20 43107013 43107304 -29046578 + AluJo SINE Alu 1 301 -11 2445 86 39 8 chr20 43107484 43107843 -29046039 + THE1C LTR MaLR 1 370 -5 372 385 103 10 chr20 43107906 43108293 -29045589 + L2 LINE L2 2886 3308 -5 635 280 58 27 chr20 43108380 43108605 -29045277 + MIR SINE MIR 31 262 0 1232 257 39 74 chr20 43108632 43109201 -29044681 - L1MC4 LINE L1 -1 8041 7493 362 176 12 0 chr20 43111026 43111111 -29042771 + C-rich Low_complexity Low_complexity 2 87 0 471 244 50 25 chr20 43111192 43111352 -29042530 - MIR SINE MIR -79 183 20 513 121 0 0 chr20 43112137 43112220 -29041662 + (TGGA)n Simple_repeat Simple_repeat 4 86 0 977 132 0 11 chr20 43112233 43112415 -29041467 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 399 353 157 0 chr20 43114371 43114657 -29039225 - MLT1K LTR MaLR -6 582 252 1149 200 42 0 chr20 43114889 43115104 -29038778 + MER58A DNA MER1_type 1 224 0 215 328 0 0 chr20 43115325 43115386 -29038496 + GA-rich Low_complexity Low_complexity 2 62 0 243 272 86 0 chr20 43115828 43115909 -29037973 - MER117 DNA MER1_type -3 194 107 2184 110 0 0 chr20 43118598 43118899 -29034983 - AluSx SINE Alu -11 301 1 209 400 48 0 chr20 43118925 43119050 -29034832 + L2 LINE L2 3175 3305 -8 2074 115 0 34 chr20 43119485 43119808 -29034074 + AluSx SINE Alu 1 312 0 1179 225 44 19 chr20 43120550 43120866 -29033016 - MLT1D LTR MaLR 0 505 182 578 268 51 33 chr20 43120847 43121123 -29032759 - MLT1D LTR MaLR -224 281 1 * 1046 244 25 11 chr20 43122074 43122353 -29031529 - L1MB8 LINE L1 0 6178 5896 1898 153 0 3 chr20 43123189 43123477 -29030405 + AluSx SINE Alu 1 287 -25 406 341 66 56 chr20 43123546 43123939 -29029943 + L2 LINE L2 2917 3313 0 250 240 31 31 chr20 43124379 43124475 -29029407 - MIR SINE MIR -120 142 47 889 120 6 17 chr20 43124938 43125113 -29028769 + (ATGGTG)n Simple_repeat Simple_repeat 4 176 0 834 145 14 0 chr20 43125130 43125356 -29028526 + (ATGGTG)n Simple_repeat Simple_repeat 1 229 0 473 220 0 9 chr20 43125358 43125591 -29028291 + (ATG)n Simple_repeat Simple_repeat 1 230 0 231 289 13 13 chr20 43125635 43125711 -29028171 - MIR SINE MIR -8 254 179 492 299 6 37 chr20 43125895 43126073 -29027809 - MIR SINE MIR -30 178 6 188 281 281 0 chr20 43126190 43126279 -29027603 - L2 LINE L2 0 3313 3200 195 293 0 0 chr20 43128905 43128946 -29024936 - L2 LINE L2 -20 3252 3212 723 73 2 2 chr20 43128949 43129078 -29024804 - L1PA4 LINE L1 -30 6125 5997 498 29 0 0 chr20 43129078 43129144 -29024738 + L1PA3 LINE L1 6088 6155 0 3623 235 47 24 chr20 43130523 43131608 -29022274 - Charlie1 DNA MER1_type -83 2678 1569 954 223 71 61 chr20 43131748 43132142 -29021740 - L1MB7 LINE L1 0 6184 5787 930 198 69 9 chr20 43132142 43132374 -29021508 + MLT1D LTR MaLR 1 246 -259 399 250 10 0 chr20 43132418 43132522 -29021360 + MLT1D LTR MaLR 401 505 0 1234 244 14 22 chr20 43132531 43132888 -29020994 - L1MB7 LINE L1 -396 5782 5429 717 225 12 0 chr20 43132878 43133047 -29020835 - L1M4b LINE L1 -6678 181 11 * 443 265 6 50 chr20 43133319 43133500 -29020382 + G-rich Low_complexity Low_complexity 3 175 0 228 250 12 38 chr20 43133511 43133591 -29020291 + G-rich Low_complexity Low_complexity 1 78 0 219 297 68 0 chr20 43134249 43134323 -29019559 - L2 LINE L2 0 3313 3235 217 299 0 69 chr20 43135916 43136003 -29017879 - L2 LINE L2 -16 3297 3217 1005 282 121 15 chr20 43136128 43136582 -29017300 - Charlie4a DNA MER1_type -6 502 1 246 355 118 28 chr20 43139687 43139898 -29013984 + MIR SINE MIR 14 243 -19 875 196 26 9 chr20 43139934 43140215 -29013667 + MER2 DNA MER2_type 23 345 0 2186 160 98 0 chr20 43140327 43140714 -29013168 - MSTB LTR MaLR 0 426 2 234 0 0 0 chr20 43142007 43142033 -29011849 + (A)n Simple_repeat Simple_repeat 1 26 0 182 247 195 13 chr20 43142196 43142273 -29011609 + MER5A DNA MER1_type 7 97 -92 281 330 61 17 chr20 43142319 43142434 -29011448 - L2 LINE L2 -23 3290 3171 248 360 90 11 chr20 43142446 43142624 -29011258 - L2 LINE L2 -18 3295 3104 374 257 64 21 chr20 43142969 43143109 -29010773 - L2 LINE L2 -162 3110 2965 242 319 0 0 chr20 43143237 43143309 -29010573 + (CA)n Simple_repeat Simple_repeat 2 73 0 633 201 0 0 chr20 43144637 43144965 -29008917 + CT-rich Low_complexity Low_complexity 1 328 0 716 277 61 14 chr20 43145563 43145776 -29008106 - MIR SINE MIR -19 243 21 484 287 154 2 chr20 43149151 43149164 -29004718 - L1M3e LINE L1 -5044 2445 2435 4073 198 18 18 chr20 43149164 43149983 -29003899 - L1MA4 LINE L1 0 6300 5482 484 287 154 2 chr20 43149983 43150174 -29003708 - L1M3e LINE L1 -5054 2435 1897 225 0 0 0 chr20 43150494 43150519 -29003363 + (CCCCAG)n Simple_repeat Simple_repeat 4 28 0 563 212 84 59 chr20 43150525 43150728 -29003154 - MER21B LTR ERV1 -635 228 21 730 340 14 38 chr20 43150863 43151286 -29002596 - L1M3e LINE L1 -5532 1954 1542 1148 208 11 4 chr20 43151404 43151683 -29002199 - L1MA4 LINE L1 -6 6294 6014 336 326 65 14 chr20 43152017 43152155 -29001727 - L1M4 LINE L1 -1044 5102 4958 899 252 254 25 chr20 43153359 43153997 -28999885 + MER21B LTR ERV1 1 784 -79 2162 120 3 0 chr20 43154425 43154734 -28999148 - AluSx SINE Alu -2 310 1 364 324 84 28 chr20 43156452 43156665 -28997217 + L2 LINE L2 3085 3309 -4 468 211 28 0 chr20 43156665 43156774 -28997108 - MER72 LTR ERV1 0 722 611 855 253 17 38 chr20 43156808 43157100 -28996782 - MER72 LTR ERV1 -195 527 242 2388 103 39 28 chr20 43157105 43157465 -28996417 + THE1B LTR MaLR 1 364 0 633 277 37 0 chr20 43157535 43157723 -28996159 - MER72 LTR ERV1 -526 196 2 189 0 0 0 chr20 43158553 43158574 -28995308 + (CCCCAG)n Simple_repeat Simple_repeat 5 25 0 446 212 20 14 chr20 43159467 43159613 -28994269 + (TGGA)n Simple_repeat Simple_repeat 1 147 0 572 150 46 31 chr20 43159617 43159827 -28994055 + (TAGA)n Simple_repeat Simple_repeat 1 237 -51 189 0 0 0 chr20 43159827 43159848 -28994034 + (CATA)n Simple_repeat Simple_repeat 3 23 0 572 150 46 31 chr20 43159848 43159901 -28993981 + (TAGA)n Simple_repeat Simple_repeat 237 288 0 26 50 0 0 chr20 43159954 43159994 -28993888 + AT_rich Low_complexity Low_complexity 1 40 0 194 83 56 0 chr20 43160045 43160081 -28993801 + (TTTG)n Simple_repeat Simple_repeat 1 38 0 991 209 80 0 chr20 43161977 43162178 -28991704 - MER20 DNA MER1_type -2 217 1 329 370 20 0 chr20 43163313 43163459 -28990423 + MIR SINE MIR 40 188 -74 194 161 0 0 chr20 43165237 43165268 -28988614 + MIR SINE MIR 158 188 -74 364 291 27 0 chr20 43165373 43165483 -28988399 - L2 LINE L2 -16 3297 3185 479 204 56 14 chr20 43166725 43166867 -28987015 - MER20 DNA MER1_type -54 165 18 234 0 0 0 chr20 43167741 43167767 -28986115 + (TTCA)n Simple_repeat Simple_repeat 2 27 0 189 364 66 0 chr20 43168181 43168302 -28985580 + L2 LINE L2 3141 3269 -3 22 0 0 0 chr20 43168701 43168723 -28985159 + AT_rich Low_complexity Low_complexity 1 22 0 200 219 156 31 chr20 43170258 43170354 -28983528 - L2 LINE L2 -202 3111 3004 1939 133 13 17 chr20 43170673 43170974 -28982908 + AluSx SINE Alu 1 300 -12 358 313 11 28 chr20 43171909 43172088 -28981794 + (CCCA)n Simple_repeat Simple_repeat 2 177 0 246 219 0 0 chr20 43172151 43172215 -28981667 + (CCCA)n Simple_repeat Simple_repeat 1 64 0 980 168 4 0 chr20 43172266 43172519 -28981363 + (TCCA)n Simple_repeat Simple_repeat 1 254 0 762 199 0 6 chr20 43172542 43172880 -28981002 + (TCCA)n Simple_repeat Simple_repeat 1 335 0 396 375 20 0 chr20 43172965 43173117 -28980765 + MIR SINE MIR 93 247 -15 248 299 20 75 chr20 43173312 43173459 -28980423 + MIR SINE MIR 63 201 -61 2417 244 55 4 chr20 43173958 43174662 -28979220 - L1MB3 LINE L1 0 6183 5444 230 222 49 37 chr20 43176441 43176522 -28977360 - L1MD3 LINE L1 -10 7985 7904 2167 108 0 31 chr20 43177051 43177374 -28976508 + AluSq SINE Alu 1 313 0 305 294 99 78 chr20 43180927 43181260 -28972622 + L1M2 LINE L1 1015 1354 -5495 808 191 191 30 chr20 43181375 43181610 -28972272 - ORSL DNA AcHobo -2 273 1 244 355 70 30 chr20 43181716 43181916 -28971966 - L2 LINE L2 -418 2896 2689 1895 177 100 30 chr20 43181946 43182336 -28971546 - MLT1D LTR MaLR -4 501 71 1484 217 111 30 chr20 43182336 43182732 -28971150 - MSTC LTR MaLR 0 428 1 1895 177 100 30 chr20 43182732 43182809 -28971073 - MLT1D LTR MaLR -434 71 1 1122 231 196 35 chr20 43183199 43183597 -28970285 - MER31B LTR ERV1 -4 462 1 402 185 101 107 chr20 43184289 43184467 -28969415 - MLT1A2 LTR MaLR -157 217 30 280 286 9 38 chr20 43184546 43184651 -28969231 + MIR SINE MIR 41 142 -120 1779 166 7 17 chr20 43184657 43184958 -28968924 + AluJo SINE Alu 1 298 -14 572 313 25 33 chr20 43184959 43185199 -28968683 - MIR SINE MIR -2 260 23 420 270 32 27 chr20 43185737 43185900 -28967982 + MIR SINE MIR 9 171 -37 786 211 0 0 chr20 43236562 43236737 -28917145 + (ATG)n Simple_repeat Simple_repeat 1 175 0 244 342 52 67 chr20 43236912 43237242 -28916640 - L2 LINE L2 -5 3267 2943 339 85 0 0 chr20 43237426 43237473 -28916409 + (TGAA)n Simple_repeat Simple_repeat 4 50 0 344 362 35 0 chr20 43237767 43237908 -28915974 - MIR SINE MIR -92 170 25 1702 141 28 10 chr20 43239117 43239408 -28914474 + AluJo SINE Alu 9 304 -8 22 35 0 0 chr20 43239773 43239802 -28914080 + GC_rich Low_complexity Low_complexity 1 29 0 263 241 30 54 chr20 43242095 43242233 -28911649 - MIR SINE MIR -57 151 19 1290 235 37 45 chr20 43243081 43243566 -28910316 - MLT1D LTR MaLR 0 505 25 369 355 27 27 chr20 43243788 43243974 -28909908 - MIR SINE MIR -71 191 6 689 324 117 29 chr20 43246400 43246915 -28906967 - MLT1K LTR MaLR -6 582 23 263 313 0 0 chr20 43248122 43248189 -28905693 + (CA)n Simple_repeat Simple_repeat 2 68 0 252 0 0 0 chr20 43249941 43249969 -28903913 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 2054 111 38 0 chr20 43253282 43253571 -28900311 - AluSx SINE Alu -12 300 1 424 253 134 1 chr20 43253739 43254091 -28899791 - LTR16A1 LTR ERVL -12 445 8 333 256 131 29 chr20 43255020 43255157 -28898725 - MIR SINE MIR -86 176 26 305 200 80 0 chr20 43255864 43255939 -28897943 - MIR SINE MIR -136 126 46 308 85 85 0 chr20 43259100 43259159 -28894723 - FAM SINE Alu 0 179 116 199 274 153 24 chr20 43259163 43259287 -28894595 + L2 LINE L2 3073 3212 -60 1320 101 11 5 chr20 43259617 43259806 -28894076 - AluSg/x SINE Alu 0 312 123 1757 167 16 19 chr20 43259994 43260305 -28893577 + AluJo SINE Alu 1 310 -2 227 324 23 29 chr20 43262928 43263101 -28890781 + C-rich Low_complexity Low_complexity 4 175 0 * 308 282 35 35 chr20 43262979 43263153 -28890729 + (CCCCAG)n Simple_repeat Simple_repeat 4 177 0 569 264 110 48 chr20 43264538 43264811 -28889071 - MLT2C1 LTR ERVL 0 397 108 827 182 3 0 chr20 43264811 43265119 -28888763 + (ATGGTG)n Simple_repeat Simple_repeat 1 309 0 194 191 21 43 chr20 43266418 43266465 -28887417 - MER5A DNA MER1_type -89 100 55 195 42 0 0 chr20 43268454 43268478 -28885404 + (GGA)n Simple_repeat Simple_repeat 1 24 0 228 220 44 22 chr20 43268767 43268858 -28885024 - MLT1K LTR MaLR -355 233 141 257 312 75 11 chr20 43269099 43269192 -28884690 + MIR3 SINE MIR 57 155 -53 187 346 109 0 chr20 43269401 43269502 -28884380 - MIR SINE MIR -51 211 100 188 353 16 42 chr20 43269574 43269764 -28884118 + L2 LINE L2 2877 3061 -211 195 69 0 0 chr20 43271075 43271104 -28882778 + (CA)n Simple_repeat Simple_repeat 2 30 0 363 324 46 12 chr20 43271133 43271306 -28882576 + (CATG)n Simple_repeat Simple_repeat 1 179 0 371 200 126 11 chr20 43272138 43272233 -28881649 - MER5A DNA MER1_type -66 123 18 2465 65 0 0 chr20 43273489 43273796 -28880086 + AluY SINE Alu 4 310 -1 485 323 82 22 chr20 43273834 43273882 -28880000 - L1ME4a LINE L1 -105 6016 5972 2224 116 3 0 chr20 43273882 43274192 -28879690 - AluSq SINE Alu 0 313 3 485 323 82 22 chr20 43274192 43274226 -28879656 - L1ME4a LINE L1 -149 5972 5941 2117 131 7 0 chr20 43274226 43274531 -28879351 + AluSx SINE Alu 1 307 -5 485 323 82 22 chr20 43274531 43274862 -28879020 - L1ME4a LINE L1 -180 5941 5577 262 330 27 58 chr20 43274946 43275134 -28878748 - MIR SINE MIR -32 230 49 738 274 111 31 chr20 43275238 43275668 -28878214 - L1ME4a LINE L1 -744 5402 4998 4485 88 12 3 chr20 43277398 43278002 -28875880 - L1PA11 LINE L1 -3 6171 5563 847 210 113 0 chr20 43278308 43278503 -28875379 - MER58A DNA MER1_type -2 222 6 268 228 109 10 chr20 43279552 43279653 -28874229 - MLT1J1 LTR MaLR -52 394 284 567 259 44 0 chr20 43279666 43279824 -28874058 - MLT1J2 LTR MaLR -282 168 4 280 363 170 0 chr20 43279946 43280128 -28873754 + L2 LINE L2 3088 3300 -13 204 97 0 0 chr20 43280128 43280159 -28873723 + (TGAG)n Simple_repeat Simple_repeat 1 31 0 375 283 0 0 chr20 43280526 43280703 -28873179 + (CA)n Simple_repeat Simple_repeat 2 178 0 268 279 6 23 chr20 43280732 43280904 -28872978 + (CA)n Simple_repeat Simple_repeat 2 170 0 192 233 50 17 chr20 43281761 43281821 -28872061 - L2 LINE L2 -17 3255 3194 1685 296 64 55 chr20 43283500 43284909 -28868973 + L1ME LINE L1 11 1482 -4779 2149 116 0 7 chr20 43284909 43285211 -28868671 + AluSx SINE Alu 1 300 -12 1685 296 64 55 chr20 43285211 43285650 -28868232 + L1ME LINE L1 1482 1916 -4345 2100 129 0 3 chr20 43285686 43285981 -28867901 + AluSx SINE Alu 1 294 -18 280 346 76 44 chr20 43288002 43288317 -28865565 + L2 LINE L2 2989 3313 0 611 94 10 0 chr20 43289969 43290065 -28863817 + (TCCA)n Simple_repeat Simple_repeat 1 97 0 2699 108 11 3 chr20 43290090 43290462 -28863420 - THE1C LTR MaLR 0 375 1 508 277 180 0 chr20 43290612 43290979 -28862903 - L2 LINE L2 -243 3070 2637 796 192 9 0 chr20 43292928 43293852 -28860030 + (TCCA)n Simple_repeat Simple_repeat 1 932 0 406 345 108 29 chr20 43294385 43295144 -28858738 - L2 LINE L2 -46 3267 2441 2101 121 0 3 chr20 43295543 43295833 -28858049 - AluSg SINE Alu -21 289 1 2109 119 3 7 chr20 43295839 43296149 -28857733 - AluSq SINE Alu -4 309 1 662 192 182 44 chr20 43296156 43296359 -28857523 + MER106A DNA MER1_type 3 233 -3 2371 77 0 0 chr20 43296444 43296741 -28857141 + AluSg1 SINE Alu 1 297 -12 2299 82 0 16 chr20 43296741 43297045 -28856837 + AluY SINE Alu 1 299 -12 874 284 97 5 chr20 43297106 43297528 -28856354 - LTR16C LTR ERVL -30 461 1 579 212 0 0 chr20 43297889 43298040 -28855842 + (ATG)n Simple_repeat Simple_repeat 1 151 0 848 180 12 0 chr20 43298141 43298308 -28855574 - L1 LINE L1 -1855 4291 4123 231 364 10 30 chr20 43298713 43298812 -28855070 + L3 LINE CR1 1327 1423 -154 2070 113 10 22 chr20 43299125 43299436 -28854446 - AluSx SINE Alu -5 307 1 433 243 128 37 chr20 43299799 43300095 -28853787 + MLT1H LTR MaLR 23 345 -204 761 223 118 85 chr20 43300433 43300823 -28853059 + MLT1C LTR MaLR 65 467 0 279 214 0 0 chr20 43301257 43301327 -28852555 + (TG)n Simple_repeat Simple_repeat 1 70 0 386 251 3 69 chr20 43301884 43302110 -28851772 + G-rich Low_complexity Low_complexity 1 211 0 * 416 212 0 96 chr20 43302044 43302242 -28851640 + GA-rich Low_complexity Low_complexity 1 179 0 227 158 118 92 chr20 43303343 43303419 -28850463 - MLT1A1 LTR MaLR -171 194 117 284 231 83 0 chr20 43303492 43303600 -28850282 + MLT1A1 LTR MaLR 172 288 -77 328 240 24 0 chr20 43308368 43308493 -28845389 + (ATGGTG)n Simple_repeat Simple_repeat 2 129 0 449 323 103 22 chr20 43308511 43308743 -28845139 - MIR SINE MIR -6 256 6 1675 168 28 7 chr20 43310185 43310476 -28843406 + AluSx SINE Alu 1 297 -15 712 305 34 4 chr20 43310552 43310785 -28843097 - MIR SINE MIR -15 247 8 1384 297 67 31 chr20 43310807 43311536 -28842346 + L2 LINE L2 2312 3069 -244 306 368 91 49 chr20 43311898 43312022 -28841860 + L1M2 LINE L1 1734 1851 -4998 465 19 0 0 chr20 43312022 43312076 -28841806 + (TG)n Simple_repeat Simple_repeat 2 55 0 306 368 91 49 chr20 43312076 43312280 -28841602 + L1M2 LINE L1 1851 2076 -4773 1735 254 55 85 chr20 43312493 43313613 -28840269 + L1MC5 LINE L1 6455 7547 -414 462 290 13 13 chr20 43313721 43313876 -28840006 + MIR SINE MIR 35 189 -73 1883 147 52 31 chr20 43313877 43314203 -28839679 - MER1B DNA MER1_type -1 336 4 1401 246 52 14 chr20 43314210 43314650 -28839232 - L1MB7 LINE L1 -167 6017 5561 207 160 0 60 chr20 43315135 43315185 -28838697 + C-rich Low_complexity Low_complexity 2 48 0 287 291 103 0 chr20 43317115 43317232 -28836650 + MLT1K LTR MaLR 157 285 -303 655 236 0 114 chr20 43317258 43317483 -28836399 + MIR SINE MIR 12 208 -54 1988 138 52 35 chr20 43317483 43317852 -28836030 - THE1C LTR MaLR 0 375 1 655 236 0 114 chr20 43317852 43317872 -28836010 + MIR SINE MIR 208 229 -33 268 224 122 20 chr20 43318193 43318291 -28835591 + MLT1K LTR MaLR 458 565 -23 356 331 39 0 chr20 43319027 43319205 -28834677 - MLT1K LTR MaLR -332 256 72 180 234 39 52 chr20 43320050 43320127 -28833755 - L2 LINE L2 -89 3183 3108 195 42 0 0 chr20 43320132 43320156 -28833726 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1124 149 26 88 chr20 43320190 43320418 -28833464 - AluJo SINE Alu -92 220 7 416 199 16 4 chr20 43320726 43320826 -28833056 + LTR16A1 LTR ERVL 376 457 0 1773 173 3 0 chr20 43321971 43322260 -28831622 + AluJo SINE Alu 1 290 -22 265 301 68 0 chr20 43322458 43322561 -28831321 + MIR SINE MIR 36 145 -63 237 132 0 0 chr20 43323193 43323231 -28830651 + (CCTG)n Simple_repeat Simple_repeat 2 39 0 1955 112 19 56 chr20 43323589 43323911 -28829971 + AluSx SINE Alu 1 310 -2 661 160 34 13 chr20 43324351 43325028 -28828854 + (TG)n Simple_repeat Simple_repeat 1 691 0 203 308 0 0 chr20 43326788 43326840 -28827042 + (CGTG)n Simple_repeat Simple_repeat 4 55 0 543 366 87 46 chr20 43327692 43328148 -28825734 - L1M4 LINE L1 -2882 3264 2779 1692 136 23 45 chr20 43328148 43328228 -28825654 + AluJo SINE Alu 1 81 -231 2760 19 0 0 chr20 43328228 43328538 -28825344 + AluYb8 SINE Alu 1 310 -8 1692 136 23 45 chr20 43328538 43328767 -28825115 + AluJo SINE Alu 81 303 -9 543 366 87 46 chr20 43328767 43328873 -28825009 - L1M4 LINE L1 -3367 2779 2679 449 263 88 29 chr20 43329996 43330167 -28823715 - MER5A DNA MER1_type -8 181 1 227 326 82 14 chr20 43330615 43330762 -28823120 + MIR SINE MIR 16 172 -36 313 322 41 27 chr20 43330950 43331096 -28822786 + L2 LINE L2 3161 3308 -5 405 136 7 65 chr20 43331579 43331734 -28822148 + (CAGAGA)n Simple_repeat Simple_repeat 6 151 0 2363 169 31 5 chr20 43332648 43333063 -28820819 - MSTB LTR MaLR 0 426 1 980 145 0 0 chr20 43333424 43333569 -28820313 - AluJb SINE Alu -5 307 163 216 0 0 0 chr20 43333575 43333599 -28820283 + (TATTG)n Simple_repeat Simple_repeat 2 25 0 1971 136 0 7 chr20 43333599 43333887 -28819995 - AluSx SINE Alu -24 288 1 1111 214 91 93 chr20 43334409 43334894 -28818988 - MLT1E2 LTR MaLR 0 626 143 618 297 26 5 chr20 43335224 43335412 -28818470 + MIR SINE MIR 64 256 -6 265 333 89 17 chr20 43336821 43337032 -28816850 + L2 LINE L2 3005 3313 0 234 316 13 13 chr20 43337614 43337693 -28816189 - MIR SINE MIR -104 158 80 473 278 46 0 chr20 43338984 43339135 -28814747 - MER53 DNA DNA -11 178 21 250 305 0 12 chr20 43342088 43342170 -28811712 - MLT1K LTR MaLR -272 316 236 950 229 5 9 chr20 43342729 43342952 -28810930 - L1MD2 LINE L1 -3 6356 6135 600 177 0 0 chr20 43342971 43343146 -28810736 + (TG)n Simple_repeat Simple_repeat 2 176 0 690 167 0 0 chr20 43343197 43343377 -28810505 + (TG)n Simple_repeat Simple_repeat 1 180 0 259 208 0 26 chr20 43343377 43343454 -28810428 + (TCTCTG)n Simple_repeat Simple_repeat 2 76 0 627 183 0 0 chr20 43343457 43343637 -28810245 + (TG)n Simple_repeat Simple_repeat 1 180 0 2320 269 36 11 chr20 43343638 43344803 -28809079 - L1MD2 LINE L1 -362 5997 4808 184 303 132 0 chr20 43345037 43345113 -28808769 + MIR SINE MIR 85 170 -92 354 333 65 23 chr20 43346360 43346576 -28807306 - MIR SINE MIR -29 233 9 230 119 0 24 chr20 43346603 43346645 -28807237 - MLT1L LTR MaLR -7 608 568 207 341 123 15 chr20 43347078 43347339 -28806543 + L2 LINE L2 2914 3202 -70 649 222 133 18 chr20 43349045 43349270 -28804612 + MLT1C LTR MaLR 54 304 -163 327 316 57 10 chr20 43350848 43351057 -28802825 - MER89 LTR ERV1 -340 219 1 216 270 34 67 chr20 43351229 43351318 -28802564 + L2 LINE L2 3216 3301 -12 344 257 73 9 chr20 43351367 43351476 -28802406 - L1ME LINE L1 -443 5678 5563 2026 147 3 0 chr20 43352327 43352634 -28801248 + AluSx SINE Alu 1 308 -4 784 259 93 0 chr20 43354317 43354522 -28799360 + MER58A DNA MER1_type 1 224 0 278 217 9 94 chr20 43354573 43354679 -28799203 + MIR3 SINE MIR 99 195 -13 243 0 0 0 chr20 43356099 43356126 -28797756 + (TG)n Simple_repeat Simple_repeat 2 28 0 477 339 21 16 chr20 43356154 43356346 -28797536 - L1MDa LINE L1 -4472 2068 1876 230 163 0 0 chr20 43356362 43356405 -28797477 - HAL1 LINE L1 -963 1544 1502 279 198 62 0 chr20 43357412 43357493 -28796389 - L2 LINE L2 -266 3006 2921 375 290 33 49 chr20 43358427 43358610 -28795272 + MIR3 SINE MIR 26 205 -3 180 0 0 0 chr20 43360997 43361017 -28792865 + (CA)n Simple_repeat Simple_repeat 2 21 0 577 277 212 11 chr20 43366844 43367198 -28786684 + MLT1C LTR MaLR 6 430 -37 407 288 137 37 chr20 43367490 43367841 -28786041 + Charlie8 DNA MER1_type 85 470 -1947 227 308 67 8 chr20 43368003 43368123 -28785759 + L2 LINE L2 2642 2768 -546 252 328 174 12 chr20 43368143 43368402 -28785480 + L2 LINE L2 2895 3195 -118 474 294 77 0 chr20 43368407 43368601 -28785281 + MER20 DNA MER1_type 6 214 -5 201 147 0 0 chr20 43368932 43368966 -28784916 + (CAGA)n Simple_repeat Simple_repeat 3 36 0 1705 278 65 0 chr20 43370214 43370786 -28783096 - L1MB5 LINE L1 -9 6165 5557 201 179 26 0 chr20 43372447 43372486 -28781396 + (CA)n Simple_repeat Simple_repeat 1 40 0 201 288 0 0 chr20 43372512 43372592 -28781290 + (CA)n Simple_repeat Simple_repeat 1 80 0 192 270 40 119 chr20 43373837 43373963 -28779919 + MIR SINE MIR 25 140 -68 894 69 46 17 chr20 43374353 43374528 -28779354 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 826 113 47 5 chr20 43374552 43374963 -28778919 + (TGGA)n Simple_repeat Simple_repeat 1 428 0 815 135 43 0 chr20 43375001 43375695 -28778187 + (TGGA)n Simple_repeat Simple_repeat 1 724 0 264 300 62 0 chr20 43375869 43375949 -28777933 - L2 LINE L2 -1 3271 3187 897 248 14 0 chr20 43377013 43377223 -28776659 - MER58A DNA MER1_type -4 220 8 213 320 40 109 chr20 43377352 43377627 -28776255 - L2 LINE L2 -3 3269 3014 761 230 5 53 chr20 43377707 43377916 -28775966 - MLT1H LTR MaLR 0 549 351 267 281 0 0 chr20 43377916 43377980 -28775902 + GA-rich Low_complexity Low_complexity 4 67 0 697 211 7 10 chr20 43377996 43378287 -28775595 + (TGGA)n Simple_repeat Simple_repeat 1 290 0 718 193 11 0 chr20 43378300 43378476 -28775406 + (TGGA)n Simple_repeat Simple_repeat 1 178 0 601 226 11 0 chr20 43378505 43378682 -28775200 + (TGGA)n Simple_repeat Simple_repeat 1 179 0 417 236 20 0 chr20 43378728 43378876 -28775006 + (TGGG)n Simple_repeat Simple_repeat 3 153 0 * 836 133 17 22 chr20 43378854 43379035 -28774847 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 201 384 92 24 chr20 43383795 43384001 -28769881 + MIR SINE MIR 31 250 -12 278 345 58 7 chr20 43384040 43384179 -28769703 + MIR3 SINE MIR 4 149 -59 1823 107 72 38 chr20 43384182 43384473 -28769409 + AluSg1 SINE Alu 1 301 -8 2411 61 0 0 chr20 43384599 43384894 -28768988 - AluY SINE Alu -16 295 1 375 261 245 0 chr20 43385901 43386085 -28767797 + MIR SINE MIR 9 237 -25 275 229 0 0 chr20 43386365 43386435 -28767447 + GA-rich Low_complexity Low_complexity 2 71 0 782 261 62 0 chr20 43387696 43387907 -28765975 - MER58A DNA MER1_type 0 224 1 1098 112 12 0 chr20 43388061 43388222 -28765660 + FRAM SINE Alu 10 172 -4 180 0 0 0 chr20 43388308 43388328 -28765554 + (TTCA)n Simple_repeat Simple_repeat 3 22 0 2233 88 19 0 chr20 43388443 43388750 -28765132 + AluSq SINE Alu 1 313 0 336 230 102 7 chr20 43388950 43389061 -28764821 + MIR SINE MIR 80 203 -5 236 286 13 13 chr20 43390907 43390984 -28762898 - LTR67 LTR ERVL -379 178 102 659 243 44 6 chr20 43391368 43391549 -28762333 - MER58A DNA MER1_type 0 224 37 583 197 23 23 chr20 43394182 43394314 -28759568 - MLT1B LTR MaLR -258 132 1 265 264 116 23 chr20 43394488 43394617 -28759265 + L1ME3A LINE L1 5830 5970 -200 558 266 148 20 chr20 43394617 43395050 -28758832 - MLT1D LTR MaLR -1 466 8 257 206 16 0 chr20 43395266 43395329 -28758553 + L1ME3A LINE L1 6047 6110 -60 333 157 83 65 chr20 43395468 43395576 -28758306 + L1ME3A LINE L1 6044 6153 -17 366 309 114 5 chr20 43396055 43396265 -28757617 - L1M4 LINE L1 -2266 3880 3648 334 354 69 45 chr20 43396313 43396559 -28757323 - L1M4 LINE L1 -2569 3577 3326 767 300 58 26 chr20 43397106 43397453 -28756429 - MLT1J LTR MaLR -50 461 104 302 208 57 16 chr20 43397632 43397772 -28756110 - L1MC5 LINE L1 0 8042 7842 345 194 31 22 chr20 43399338 43399449 -28754433 + MER4A LTR ERV1 1 116 -349 606 273 14 37 chr20 43399453 43399731 -28754151 + MER4C LTR ERV1 275 443 -22 259 283 192 8 chr20 43400251 43400371 -28753511 - MIR SINE MIR -70 192 51 650 322 96 15 chr20 43400734 43401069 -28752813 + L1ME1 LINE L1 5787 6148 -18 456 337 30 20 chr20 43401484 43401686 -28752196 + MIR SINE MIR 47 250 -12 213 211 0 0 chr20 43401699 43401756 -28752126 + (CAT)n Simple_repeat Simple_repeat 3 59 0 1899 167 0 0 chr20 43404070 43404363 -28749519 - AluJb SINE Alu -19 293 1 2213 98 7 0 chr20 43407204 43407501 -28746381 + AluSx SINE Alu 1 299 -13 930 298 61 8 chr20 43407566 43407929 -28745953 - L1MC4a LINE L1 -1762 6046 5665 572 284 152 16 chr20 43408237 43408480 -28745402 - MLT1C LTR MaLR -15 452 177 875 200 24 24 chr20 43408486 43408651 -28745231 - FRAM SINE Alu -1 165 1 235 218 161 0 chr20 43408678 43408765 -28745117 - MLT1C LTR MaLR -391 114 14 282 261 178 22 chr20 43408864 43409094 -28744788 - LTR33 LTR ERVL -233 288 23 304 303 97 0 chr20 43409665 43409810 -28744072 + MIR SINE MIR 23 181 -81 343 298 213 5 chr20 43411043 43411231 -28742651 + MIR SINE MIR 9 235 -27 634 333 13 22 chr20 43411505 43411820 -28742062 - MLT1J LTR MaLR -199 312 1 308 325 93 0 chr20 43411904 43412055 -28741827 - L2 LINE L2 -255 3058 2894 2254 102 0 7 chr20 43412322 43412627 -28741255 + AluSg SINE Alu 1 303 -7 207 272 0 35 chr20 43413540 43413654 -28740228 + (TG)n Simple_repeat Simple_repeat 1 110 0 374 256 115 32 chr20 43414464 43414873 -28739009 - L1MC4a LINE L1 -455 5666 5219 1799 125 57 4 chr20 43414889 43415169 -28738713 - AluSx SINE Alu -17 295 1 379 252 42 17 chr20 43415947 43416066 -28737816 - MLT1K LTR MaLR -319 269 148 331 346 5 32 chr20 43418132 43418368 -28735514 + (CA)n Simple_repeat Simple_repeat 1 229 0 225 310 51 19 chr20 43418438 43418596 -28735286 + (CATG)n Simple_repeat Simple_repeat 1 163 0 253 226 54 21 chr20 43420060 43420153 -28733729 + MIR SINE MIR 34 129 -79 1129 65 0 0 chr20 43421207 43421346 -28732536 + AluSq/x SINE Alu 1 139 -174 1945 114 24 13 chr20 43421346 43421644 -28732238 + AluSx SINE Alu 6 306 -6 297 239 0 0 chr20 43422045 43422162 -28731720 + C-rich Low_complexity Low_complexity 1 117 0 354 98 0 0 chr20 43422951 43423002 -28730880 + (A)n Simple_repeat Simple_repeat 1 51 0 204 357 12 0 chr20 43426455 43426539 -28727343 - L2 LINE L2 -1 3312 3228 983 256 160 17 chr20 43426562 43427042 -28726840 - MER115 DNA AcHobo -49 644 96 248 397 7 7 chr20 43427081 43427217 -28726665 + (CA)n Simple_repeat Simple_repeat 2 137 0 309 158 12 0 chr20 43427991 43428069 -28725813 - MIR SINE MIR -61 147 103 284 231 83 0 chr20 43434297 43434405 -28719477 - MLT1A1 LTR MaLR -77 288 172 227 158 118 92 chr20 43434478 43434554 -28719328 + MLT1A1 LTR MaLR 117 194 -171 416 212 0 96 chr20 43435655 43435853 -28718029 + CT-rich Low_complexity Low_complexity 1 179 0 386 251 3 69 chr20 43435787 43436013 -28717869 + C-rich Low_complexity Low_complexity 1 211 0 * 2706 3 0 0 chr20 43436063 43436360 -28717522 + AluYa5 SINE Alu 1 297 -14 279 214 0 0 chr20 43436875 43436945 -28716937 + (CA)n Simple_repeat Simple_repeat 1 70 0 761 223 118 85 chr20 43437379 43437769 -28716113 - MLT1C LTR MaLR 0 467 65 433 243 128 37 chr20 43438110 43438406 -28715476 - MLT1H LTR MaLR -204 345 23 2070 113 10 22 chr20 43438769 43439080 -28714802 + AluSx SINE Alu 1 307 -5 231 364 10 30 chr20 43439393 43439492 -28714390 - L3 LINE CR1 -154 1423 1327 5077 164 34 4 chr20 43439897 43441199 -28712683 + L1PB3 LINE L1 4123 5485 -669 3746 74 72 45 chr20 43441199 43441778 -28712104 - LTR61 LTR ERV1 0 595 1 5077 164 34 4 chr20 43441778 43442092 -28711790 + L1PB3 LINE L1 5485 5788 -366 312 158 0 0 chr20 43442095 43442152 -28711730 + (TGGA)n Simple_repeat Simple_repeat 3 59 0 2462 110 13 37 chr20 43442180 43442437 -28711445 + L1PB3 LINE L1 5783 6030 -124 2233 91 7 0 chr20 43442437 43442735 -28711147 + AluSp SINE Alu 1 300 -13 2462 110 13 37 chr20 43442735 43442858 -28711024 + L1PB3 LINE L1 6030 6154 0 1728 164 3 23 chr20 43442865 43443170 -28710712 + AluJo SINE Alu 1 299 -13 626 159 24 8 chr20 43443175 43443301 -28710581 - L1ME1 LINE L1 -10 6156 6029 2513 259 43 6 chr20 43443303 43444067 -28709815 - L1ME1 LINE L1 -84 6082 5293 256 208 104 13 chr20 43444316 43444393 -28709489 + MER51C LTR ERV1 346 429 -211 324 211 14 0 chr20 43444458 43444529 -28709353 + MER51A LTR ERV1 474 545 -89 25 0 0 0 chr20 43444923 43444948 -28708934 + AT_rich Low_complexity Low_complexity 1 25 0 560 184 0 35 chr20 43444952 43445093 -28708789 + MER51C LTR ERV1 505 640 0 357 287 28 66 chr20 43445101 43445227 -28708655 - L1MEc LINE L1 -4572 1716 1587 2062 116 31 0 chr20 43445227 43445519 -28708363 + AluSx SINE Alu 1 301 -11 357 287 28 66 chr20 43445519 43445622 -28708260 - L1MEc LINE L1 -4701 1587 1423 1370 155 0 0 chr20 43445724 43445937 -28707945 - AluJb SINE Alu -99 213 1 1895 273 80 39 chr20 43445938 43446310 -28707572 - L1MEc LINE L1 -4862 1357 1002 930 144 0 0 chr20 43446310 43446442 -28707440 - FLAM_C SINE Alu -1 132 1 1895 273 80 39 chr20 43446442 43446965 -28706917 - L1MEc LINE L1 -5217 1002 465 308 228 33 11 chr20 43446980 43447072 -28706810 - MLT1C LTR MaLR -15 452 359 1729 149 28 7 chr20 43447393 43447681 -28706201 + AluJo SINE Alu 1 294 -18 2337 85 0 0 chr20 43447682 43447989 -28705893 + AluY SINE Alu 1 307 -4 1173 283 65 16 chr20 43448313 43448661 -28705221 + L1M4 LINE L1 4044 4430 -1716 2682 97 14 3 chr20 43448661 43449021 -28704861 - THE1B LTR MaLR 0 364 1 1173 283 65 16 chr20 43449021 43449223 -28704659 + L1M4 LINE L1 4430 4621 -1525 1513 162 46 0 chr20 43449291 43449532 -28704350 - AluJo SINE Alu -52 260 9 198 0 0 0 chr20 43449553 43449575 -28704307 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 274 274 12 49 chr20 43450609 43450773 -28703109 + C-rich Low_complexity Low_complexity 5 162 0 262 231 0 0 chr20 43450884 43450936 -28702946 - MIR SINE MIR -103 159 108 240 231 182 35 chr20 43451524 43451667 -28702215 - MLT1K LTR MaLR -112 476 313 363 192 19 68 chr20 43452387 43452696 -28701186 + C-rich Low_complexity Low_complexity 1 293 0 394 240 91 32 chr20 43452778 43452960 -28700922 - L1MA10 LINE L1 0 6334 5980 310 196 271 0 chr20 43453065 43453172 -28700710 - L1ME LINE L1 -450 5714 5579 1866 113 24 14 chr20 43454111 43454403 -28699479 - AluSx SINE Alu -13 299 5 1172 300 91 2 chr20 43454898 43455415 -28698467 - L1ME3 LINE L1 -4 6158 5596 645 228 112 1 chr20 43456585 43456853 -28697029 - L1ME3 LINE L1 -680 5484 5191 248 283 125 0 chr20 43457220 43457340 -28696542 - L1ME3 LINE L1 -968 5178 5044 657 363 92 6 chr20 43457445 43458111 -28695771 - L1ME3 LINE L1 -1352 4794 4072 1053 229 93 20 chr20 43458582 43458982 -28694900 + MLT1C LTR MaLR 8 378 -12 298 158 0 26 chr20 43460450 43460526 -28693356 + G-rich Low_complexity Low_complexity 3 76 0 229 283 46 17 chr20 43461833 43462006 -28691876 + (CACGA)n Simple_repeat Simple_repeat 1 178 0 216 283 33 56 chr20 43463376 43463556 -28690326 + (CGAGG)n Simple_repeat Simple_repeat 4 179 0 307 192 167 0 chr20 43468101 43468179 -28685703 + L1MC1 LINE L1 5287 5377 -2665 1480 193 7 30 chr20 43468190 43468495 -28685387 + AluJo SINE Alu 1 298 -14 258 305 48 0 chr20 43468516 43468683 -28685199 + L1MC4a LINE L1 2219 2393 -4003 342 313 23 8 chr20 43469138 43469266 -28684616 + L1MC4a LINE L1 5638 5767 -2110 351 371 0 0 chr20 43469668 43469838 -28684044 + G-rich Low_complexity Low_complexity 1 170 0 659 251 60 14 chr20 43469841 43470056 -28683826 + L1MC4a LINE L1 6112 6336 -1541 626 244 0 7 chr20 43470113 43470248 -28683634 + FLAM_A SINE Alu 1 134 -8 813 283 102 62 chr20 43470269 43470721 -28683161 + L1MC4a LINE L1 6331 6800 -1077 1846 275 115 19 chr20 43471354 43472208 -28681674 + L1MC4a LINE L1 6773 7708 -169 1131 295 42 39 chr20 43472190 43472784 -28681098 + L1MA3 LINE L1 5294 5889 -416 * 4682 166 48 14 chr20 43472294 43473207 -28680675 + L1MC1 LINE L1 5388 6331 -2 460 186 48 0 chr20 43473249 43473358 -28680524 + L1MD3 LINE L1 7655 7985 -10 448 291 145 64 chr20 43473821 43474241 -28679641 + L1MC4a LINE L1 6447 6900 -908 277 213 0 16 chr20 43475101 43475162 -28678720 + L1MC4 LINE L1 7982 8041 -1 1963 114 25 41 chr20 43475953 43476269 -28677613 + AluSx SINE Alu 1 311 -1 777 159 30 0 chr20 43476308 43476440 -28677442 + AluJb SINE Alu 176 311 -1 420 370 126 17 chr20 43476528 43476950 -28676932 + HAL1b LINE L1 178 645 -703 1046 296 82 53 chr20 43477309 43478328 -28675554 + L1MC5 LINE L1 6478 7506 -455 2179 82 0 0 chr20 43478563 43478844 -28675038 - AluSg SINE Alu -6 304 24 733 279 103 34 chr20 43479958 43480398 -28673484 + L1M4b LINE L1 1363 1999 -4958 2830 6 0 0 chr20 43480398 43480713 -28673169 + AluYb8 SINE Alu 1 315 -3 733 279 103 34 chr20 43480713 43480865 -28673017 + L1M4b LINE L1 1999 2139 -4818 1312 130 4 43 chr20 43480990 43481221 -28672661 + AluJb SINE Alu 83 304 -8 943 291 27 35 chr20 43481229 43481335 -28672547 + L1M4b LINE L1 2278 2383 -4755 2255 90 7 0 chr20 43481335 43481635 -28672247 + AluSc SINE Alu 1 302 -7 943 291 27 35 chr20 43481635 43481930 -28671952 + L1M4b LINE L1 2383 2676 -4462 1661 181 0 10 chr20 43484481 43484774 -28669108 + AluSx SINE Alu 2 291 -21 247 300 67 0 chr20 43485932 43486022 -28667860 - L1MC4 LINE L1 -142 7900 7805 307 337 56 17 chr20 43486140 43486318 -28667564 - L1MC4 LINE L1 -403 7639 7455 880 255 27 23 chr20 43486599 43486906 -28666976 - L1MC4 LINE L1 -991 6902 6521 1415 207 7 20 chr20 43487314 43487609 -28666273 - AluJo SINE Alu -19 293 3 433 168 103 9 chr20 43488371 43488478 -28665404 + L1MB3 LINE L1 6067 6183 0 1838 145 19 16 chr20 43489132 43489443 -28664439 - AluJb SINE Alu 0 312 1 297 339 93 11 chr20 43489760 43489943 -28663939 - MER46C DNA MER2_type 0 338 141 627 201 110 0 chr20 43491839 43491993 -28661889 + L1MA4A LINE L1 6122 6292 -11 239 352 37 0 chr20 43494190 43494298 -28659584 + L1ME LINE L1 5610 5721 -400 180 111 0 0 chr20 43497418 43497445 -28656437 + (A)n Simple_repeat Simple_repeat 1 27 0 405 0 0 0 chr20 43498723 43498768 -28655114 + (TG)n Simple_repeat Simple_repeat 1 45 0 405 39 0 0 chr20 43498830 43498881 -28655001 + (TG)n Simple_repeat Simple_repeat 1 51 0 225 276 35 0 chr20 43498994 43499052 -28654830 - MIR SINE MIR -104 158 99 1943 166 63 31 chr20 43501064 43501597 -28652285 + MLT2A2 LTR ERVL 6 554 0 1491 177 30 33 chr20 43501678 43501977 -28651905 + AluJo SINE Alu 5 302 -10 2257 75 0 38 chr20 43502173 43502491 -28651391 + AluY SINE Alu 1 306 -5 1162 112 24 0 chr20 43502500 43502670 -28651212 + AluSg/x SINE Alu 127 300 -10 291 315 110 0 chr20 43504166 43504293 -28649589 - L1ME LINE L1 -268 5853 5713 278 316 51 0 chr20 43504860 43504958 -28648924 - L1MEd LINE L1 -5445 674 572 331 304 30 7 chr20 43505264 43505399 -28648483 - L1MEd LINE L1 -5967 152 15 313 202 34 45 chr20 43505433 43505522 -28648360 + HAL1 LINE L1 830 917 -1590 388 304 109 39 chr20 43505627 43506169 -28647713 + HAL1 LINE L1 1243 1822 -685 24 32 0 0 chr20 43506643 43506674 -28647208 + AT_rich Low_complexity Low_complexity 1 31 0 2248 263 99 33 chr20 43507739 43507976 -28645906 + L1ME1 LINE L1 4457 4677 -1489 1722 147 41 3 chr20 43507976 43508268 -28645614 + AluSx SINE Alu 1 303 -9 2248 263 99 33 chr20 43508268 43508308 -28645574 + L1ME1 LINE L1 4677 4713 -1453 2114 98 0 0 chr20 43508308 43508594 -28645288 + AluSx SINE Alu 27 312 0 2248 263 99 33 chr20 43508594 43508630 -28645252 + L1ME1 LINE L1 4713 4745 -1421 1685 140 19 4 chr20 43508630 43508901 -28644981 + AluSx SINE Alu 14 288 -24 2248 263 99 33 chr20 43508901 43509403 -28644479 + L1ME1 LINE L1 4745 5212 -954 2054 111 0 10 chr20 43509403 43509701 -28644181 + AluSx SINE Alu 1 295 -17 2248 263 99 33 chr20 43509701 43510245 -28643637 + L1ME1 LINE L1 5212 5934 -232 1639 154 128 18 chr20 43510245 43510582 -28643300 + THE1C LTR MaLR 1 374 -1 2248 263 99 33 chr20 43510582 43510827 -28643055 + L1ME1 LINE L1 5934 6161 -5 866 229 138 0 chr20 43513169 43513379 -28640503 - MER8 DNA MER2_type 0 239 1 2378 70 0 0 chr20 43513731 43514029 -28639853 + AluY SINE Alu 1 298 -13 219 114 0 0 chr20 43514303 43514338 -28639544 + (CA)n Simple_repeat Simple_repeat 1 35 0 2229 97 0 0 chr20 43514442 43514741 -28639141 + AluSc SINE Alu 1 299 -10 2154 128 0 0 chr20 43518271 43518576 -28635306 + AluSq SINE Alu 1 305 -8 2375 80 0 0 chr20 43518577 43518878 -28635004 + AluY SINE Alu 1 301 -10 1319 284 47 43 chr20 43519078 43519142 -28634740 + L1ME LINE L1 4303 4365 -1781 1879 145 0 23 chr20 43519142 43519446 -28634436 - AluJo SINE Alu -15 297 1 1319 284 47 43 chr20 43519446 43519640 -28634242 + L1ME LINE L1 4365 4557 -1589 2499 54 0 0 chr20 43519640 43519936 -28633946 - AluY SINE Alu -15 296 1 1319 284 47 43 chr20 43519936 43520759 -28633123 + L1ME LINE L1 4557 5389 -757 2186 85 0 23 chr20 43520836 43521141 -28632741 - AluSq SINE Alu -15 298 1 278 307 88 0 chr20 43521156 43521293 -28632589 + L1ME LINE L1 5417 5565 -597 1589 246 45 27 chr20 43521326 43521605 -28632277 + L1ME1 LINE L1 3689 3961 -2185 1195 176 176 22 chr20 43521605 43521918 -28631964 + MLT1A1 LTR MaLR 5 365 0 1589 246 45 27 chr20 43521918 43522194 -28631688 + L1ME1 LINE L1 3961 4254 -1892 2324 81 3 0 chr20 43522834 43523143 -28630739 - AluY SINE Alu -1 310 1 1046 78 0 0 chr20 43523143 43523272 -28630610 - AluY SINE Alu -177 134 6 2108 263 58 59 chr20 43523301 43523587 -28630295 + L1ME1 LINE L1 4317 4602 -1564 2042 103 10 27 chr20 43523587 43523888 -28629994 + AluSx SINE Alu 1 296 -16 2108 263 58 59 chr20 43523888 43525432 -28628450 + L1ME1 LINE L1 4602 6161 -5 774 294 61 25 chr20 43525429 43525837 -28628045 + L1ME1 LINE L1 5414 5836 -330 * 227 290 0 0 chr20 43526177 43526239 -28627643 + Tigger3b DNA MER2_type 1 62 -1169 1666 101 0 0 chr20 43526239 43526467 -28627415 + AluY SINE Alu 76 303 -8 1201 173 150 38 chr20 43526479 43526745 -28627137 + AluJo SINE Alu 1 296 -6 4320 161 85 20 chr20 43526751 43526787 -28627095 + Tigger3b DNA MER2_type 208 240 -2788 3050 162 186 46 chr20 43526787 43527511 -28626371 + LTR1B LTR ERV1 1 826 0 4320 161 85 20 chr20 43527511 43527857 -28626025 + Tigger3b DNA MER2_type 240 562 -2466 1589 147 26 15 chr20 43527857 43528122 -28625760 + AluJb SINE Alu 2 269 -43 4320 161 85 20 chr20 43528122 43528699 -28625183 + Tigger3b DNA MER2_type 562 1231 0 587 298 170 35 chr20 43529195 43529537 -28624345 + L1MC4a LINE L1 6131 6518 -1290 233 209 154 22 chr20 43529634 43529725 -28624157 + L1MC5 LINE L1 6716 6818 -1143 1082 292 82 7 chr20 43531037 43531441 -28622441 - L1ME1 LINE L1 -5 6161 5728 964 250 77 26 chr20 43531514 43531976 -28621906 - L1ME1 LINE L1 -644 5530 5045 194 345 91 0 chr20 43534547 43534657 -28619225 + MIR SINE MIR 19 138 -70 252 288 324 14 chr20 43540459 43540681 -28613201 + L2 LINE L2 2931 3221 -92 2191 118 0 0 chr20 43540771 43541076 -28612806 + AluSx SINE Alu 1 305 -7 311 273 152 30 chr20 43541083 43541215 -28612667 + L1ME4a LINE L1 5332 5479 -2329 240 312 98 17 chr20 43541476 43541649 -28612233 + L1ME4a LINE L1 5932 6118 -3 25 31 0 0 chr20 43549442 43549474 -28604408 + GC_rich Low_complexity Low_complexity 1 32 0 63 56 0 28 chr20 43549603 43549745 -28604137 + GC_rich Low_complexity Low_complexity 1 138 0 795 283 111 6 chr20 43550305 43550658 -28603224 + MLT1J LTR MaLR 91 480 -31 1071 192 264 5 chr20 43553410 43553838 -28600044 + MLT1H LTR MaLR 11 549 0 260 313 173 6 chr20 43553869 43553942 -28599940 - MIR SINE MIR -7 255 196 2074 144 0 0 chr20 43553942 43554248 -28599634 - AluSx SINE Alu -1 311 6 260 313 173 6 chr20 43554248 43554353 -28599529 - MIR SINE MIR -66 196 47 392 228 44 15 chr20 43555927 43556063 -28597819 - L1MC4 LINE L1 0 8042 7903 1104 271 121 30 chr20 43556186 43556339 -28597543 - L1MC4 LINE L1 -104 7938 7800 2036 121 3 10 chr20 43556339 43556637 -28597245 - AluSx SINE Alu -16 296 1 1104 271 121 30 chr20 43556637 43557054 -28596828 - L1MC4 LINE L1 -242 7800 7316 21 0 0 0 chr20 43557173 43557194 -28596688 + AT_rich Low_complexity Low_complexity 1 21 0 617 165 43 0 chr20 43557203 43557318 -28596564 + FLAM_A SINE Alu 23 142 0 1652 152 0 102 chr20 43557327 43557474 -28596408 + AluSx SINE Alu 1 97 -215 2279 79 33 0 chr20 43557474 43557777 -28596105 + AluSp SINE Alu 1 313 0 1652 152 0 102 chr20 43557777 43557964 -28595918 + AluSx SINE Alu 97 301 -11 787 163 8 0 chr20 43557980 43558103 -28595779 - FLAM_C SINE Alu -9 124 1 1955 106 0 0 chr20 43558912 43559176 -28594706 + AluSc SINE Alu 36 299 -10 1734 77 5 0 chr20 43559243 43559464 -28594418 + AluSp SINE Alu 1 222 -91 236 348 9 9 chr20 43559708 43559823 -28594059 + C-rich Low_complexity Low_complexity 2 116 0 487 297 89 30 chr20 43560080 43560450 -28593432 - L1ME4a LINE L1 0 6121 5730 294 271 66 0 chr20 43560509 43560631 -28593251 - L1ME4a LINE L1 -93 6028 5899 354 257 59 0 chr20 43560794 43560895 -28592987 - L2 LINE L2 -1106 2208 2102 2493 54 0 0 chr20 43560898 43561195 -28592687 + AluSx SINE Alu 1 297 -15 441 115 0 0 chr20 43561195 43561256 -28592626 + Alu SINE Alu 234 294 -16 1545 108 4 26 chr20 43561256 43561488 -28592394 + AluSg/x SINE Alu 80 306 -4 2435 64 0 0 chr20 43562068 43562364 -28591518 + AluSc SINE Alu 5 300 -9 227 208 94 75 chr20 43564462 43564568 -28589314 - Charlie8 DNA MER1_type -2254 163 56 23 0 0 0 chr20 43565433 43565456 -28588426 + AT_rich Low_complexity Low_complexity 1 23 0 1397 167 7 78 chr20 43565640 43565922 -28587960 + AluJo SINE Alu 15 276 -36 1189 221 149 27 chr20 43566118 43566520 -28587362 - MLT1C LTR MaLR -7 460 10 1401 165 129 22 chr20 43567476 43567748 -28586134 + AluSx SINE Alu 1 301 -11 372 253 30 108 chr20 43567908 43568088 -28585794 + L1M4 LINE L1 4358 4506 -1640 7121 34 11 3 chr20 43568088 43569564 -28584318 + L1PA5 LINE L1 4671 6154 0 372 253 30 108 chr20 43569564 43569688 -28584194 + L1M4 LINE L1 4506 4638 -1508 780 276 69 14 chr20 43569688 43569963 -28583919 + L1ME LINE L1 3 292 -5778 1962 174 37 25 chr20 43569970 43570518 -28583364 + MLT2A2 LTR ERVL 1 554 0 4027 99 0 0 chr20 43570537 43571084 -28582798 + HERVL LTR ERVL 4273 4819 -835 828 281 45 0 chr20 43571093 43571317 -28582565 + L1ME LINE L1 309 542 -5528 342 0 0 0 chr20 43571318 43571356 -28582526 + (CA)n Simple_repeat Simple_repeat 1 38 0 1778 278 107 40 chr20 43571379 43571545 -28582337 + L1ME LINE L1 653 806 -5274 1770 139 16 46 chr20 43571545 43571848 -28582034 - AluJb SINE Alu -18 294 1 1778 278 107 40 chr20 43571848 43571899 -28581983 + L1ME LINE L1 806 852 -5228 1792 161 3 7 chr20 43571899 43572190 -28581692 - AluJb SINE Alu -21 291 2 1778 278 107 40 chr20 43572190 43572642 -28581240 + L1ME LINE L1 852 1272 -4808 1902 161 17 7 chr20 43572642 43572940 -28580942 + AluSx SINE Alu 3 303 -9 1778 278 107 40 chr20 43572940 43573096 -28580786 + L1ME LINE L1 1272 1416 -4664 2461 76 0 10 chr20 43573096 43573397 -28580485 + AluY SINE Alu 1 298 -13 1778 278 107 40 chr20 43573397 43573476 -28580406 + L1ME LINE L1 1416 1488 -4592 2429 90 0 0 chr20 43573476 43573775 -28580107 + AluY SINE Alu 3 301 -10 1778 278 107 40 chr20 43573775 43574269 -28579613 + L1ME LINE L1 1488 2154 -3926 2228 108 0 42 chr20 43574269 43574576 -28579306 - AluSx SINE Alu -18 294 1 1778 278 107 40 chr20 43574576 43574843 -28579039 + L1ME LINE L1 2154 2402 -3678 1352 198 8 4 chr20 43574849 43575086 -28578796 + AluJo SINE Alu 1 238 -74 244 209 55 22 chr20 43575093 43575184 -28578698 + L1MCa LINE L1 1511 1604 -4822 1707 170 0 44 chr20 43575300 43575443 -28578439 + AluJo SINE Alu 3 128 -184 2387 69 3 29 chr20 43575443 43575749 -28578133 + AluY SINE Alu 1 298 -13 1707 170 0 44 chr20 43575749 43575899 -28577983 + AluJo SINE Alu 128 283 -29 2058 153 7 0 chr20 43575973 43576268 -28577614 + AluJb SINE Alu 1 297 -15 1199 249 127 11 chr20 43576334 43576767 -28577115 + L1MB2 LINE L1 5318 5800 -370 1540 149 24 64 chr20 43576778 43576829 -28577053 - THE1C LTR MaLR 0 375 324 2247 118 3 0 chr20 43576829 43577134 -28576748 - AluSq SINE Alu -7 306 1 1540 149 24 64 chr20 43577134 43577411 -28576471 - THE1C LTR MaLR -51 324 60 473 195 0 0 chr20 43577419 43577501 -28576381 - FRAM SINE Alu -83 93 12 332 174 14 14 chr20 43577501 43577570 -28576312 - L1MB2 LINE L1 -112 6059 5991 259 241 0 0 chr20 43577610 43577664 -28576218 + MER45 DNA AcHobo 1528 1581 0 701 207 10 113 chr20 43577796 43577999 -28575883 - MER63A DNA MER1_type -26 184 3 2328 82 16 10 chr20 43578083 43578387 -28575495 + AluY SINE Alu 1 306 -5 2367 180 45 28 chr20 43578398 43578474 -28575408 + L1MB2 LINE L1 5632 5705 -466 2319 108 3 0 chr20 43578474 43578771 -28575111 - AluSg SINE Alu -12 298 1 2367 180 45 28 chr20 43578771 43579223 -28574659 + L1MB2 LINE L1 5705 6169 -2 370 288 36 22 chr20 43579230 43579369 -28574513 + MIR3 SINE MIR 20 160 -48 1748 146 20 78 chr20 43579492 43579838 -28574044 + THE1C LTR MaLR 1 323 -52 2249 118 3 0 chr20 43579838 43580143 -28573739 + AluSq SINE Alu 1 306 -7 1748 146 20 78 chr20 43580143 43580194 -28573688 + THE1C LTR MaLR 323 375 0 233 182 73 0 chr20 43580227 43580282 -28573600 - L1MB2 LINE L1 -778 5513 5455 344 198 66 11 chr20 43580293 43580384 -28573498 - L1MB3 LINE L1 -40 6143 6048 330 161 0 0 chr20 43580384 43580440 -28573442 - Alu SINE Alu -2 299 244 705 209 0 0 chr20 43580441 43580599 -28573283 + CT-rich Low_complexity Low_complexity 2 159 0 917 208 116 33 chr20 43580599 43580902 -28572980 + MLT2B3 LTR ERVL 223 550 -4 937 203 23 0 chr20 43580994 43581211 -28572671 + L1MA7 LINE L1 6070 6291 0 278 175 0 0 chr20 43581218 43581275 -28572607 + L1MB2 LINE L1 6115 6171 0 784 158 5 119 chr20 43581292 43581379 -28572503 + L1MB2 LINE L1 5870 5923 -248 2309 97 0 7 chr20 43581379 43581688 -28572194 + AluJb SINE Alu 1 307 -5 784 158 5 119 chr20 43581688 43581802 -28572080 + L1MB2 LINE L1 5923 6048 -123 1408 200 72 38 chr20 43581907 43582307 -28571575 + MLT1C LTR MaLR 42 455 -12 2585 57 0 0 chr20 43582630 43582926 -28570956 - AluY SINE Alu -15 296 1 2269 103 0 52 chr20 43583111 43583440 -28570442 + AluSx SINE Alu 1 312 0 525 263 30 0 chr20 43583838 43583971 -28569911 + MLT1C LTR MaLR 453 589 -1 273 374 0 11 chr20 43584570 43584752 -28569130 + (CCCA)n Simple_repeat Simple_repeat 1 180 0 * 388 350 0 6 chr20 43584634 43584814 -28569068 + (CA)n Simple_repeat Simple_repeat 1 179 0 343 358 0 6 chr20 43584830 43585006 -28568876 + (CA)n Simple_repeat Simple_repeat 2 176 0 470 355 0 0 chr20 43585102 43585440 -28568442 + (CA)n Simple_repeat Simple_repeat 1 338 0 234 0 0 0 chr20 43585495 43585521 -28568361 + (CA)n Simple_repeat Simple_repeat 1 26 0 4307 134 57 110 chr20 43585525 43585843 -28568039 + Tigger3b DNA MER2_type 1 334 -2694 2175 143 0 0 chr20 43585843 43586150 -28567732 - AluSx SINE Alu 0 312 6 2071 140 0 10 chr20 43586156 43586456 -28567426 - AluJo SINE Alu -15 297 1 4307 134 57 110 chr20 43586456 43586950 -28566932 + Tigger3b DNA MER2_type 339 857 -2171 1855 161 0 34 chr20 43586950 43587248 -28566634 - AluJo SINE Alu -24 288 1 4307 134 57 110 chr20 43587248 43587452 -28566430 + Tigger3b DNA MER2_type 857 969 -2059 2154 107 4 0 chr20 43587452 43587762 -28566120 - AluSx SINE Alu 0 311 1 4307 134 57 110 chr20 43587762 43587812 -28566070 + Tigger3b DNA MER2_type 969 1020 -211 2247 143 31 29 chr20 43587812 43587862 -28566020 - MSTC LTR MaLR 0 428 380 2126 119 0 26 chr20 43587862 43588165 -28565717 - AluSg SINE Alu -15 295 1 2247 143 31 29 chr20 43588165 43588527 -28565355 - MSTC LTR MaLR -48 380 15 1015 214 0 19 chr20 43588539 43588745 -28565137 + Tigger3b DNA MER2_type 1028 1229 -2 237 205 0 0 chr20 43588745 43588775 -28565107 + Tigger3b DNA MER2_type 1202 1231 0 289 211 0 0 chr20 43588775 43588830 -28565052 + MLT2B1 LTR ERVL 466 520 0 3237 229 48 101 chr20 43588835 43589390 -28564492 + MLT1A1-int LTR MaLR 6 589 -782 2506 82 0 0 chr20 43589390 43589695 -28564187 + AluY SINE Alu 1 305 -6 3237 229 48 101 chr20 43589695 43590327 -28563555 + MLT1A1-int LTR MaLR 589 1109 -262 2109 148 3 0 chr20 43590327 43590631 -28563251 - AluSx SINE Alu -7 305 1 3237 229 48 101 chr20 43590631 43590854 -28563028 + MLT1A1-int LTR MaLR 1109 1342 -29 1284 192 51 40 chr20 43590869 43591213 -28562669 + MLT1A1 LTR MaLR 7 350 -15 2242 123 0 0 chr20 43591437 43591730 -28562152 - AluSq SINE Alu -20 293 1 2511 76 0 0 chr20 43591755 43592058 -28561824 - AluY SINE Alu -8 303 1 181 289 13 40 chr20 43592186 43592262 -28561620 + MER5B DNA MER1_type 105 178 0 2055 110 33 0 chr20 43592576 43592849 -28561033 + AluSx SINE Alu 1 282 -30 594 75 0 0 chr20 43592849 43592929 -28560953 + (AATAG)n Simple_repeat Simple_repeat 2 81 0 723 149 15 22 chr20 43592943 43593077 -28560805 + AluJo/FLAM SINE Alu 1 133 -169 1705 189 3 3 chr20 43593079 43593375 -28560507 + AluJo SINE Alu 1 296 -16 2399 93 3 3 chr20 43595515 43595825 -28558057 + AluSg SINE Alu 1 310 0 233 287 35 0 chr20 43596468 43596555 -28557327 + MER5B DNA MER1_type 3 92 -86 694 284 154 50 chr20 43597731 43597881 -28556001 - HAL1 LINE L1 -1168 1339 1206 2154 130 0 7 chr20 43597881 43598182 -28555700 - AluSx SINE Alu -13 299 1 694 284 154 50 chr20 43598182 43598876 -28555006 - HAL1 LINE L1 -1301 1206 407 1909 166 89 0 chr20 43599581 43599961 -28553921 + MSTB LTR MaLR 1 414 -12 2307 101 3 3 chr20 43600034 43600330 -28553552 + AluSx SINE Alu 1 296 -16 220 300 9 5 chr20 43600365 43600446 -28553436 + MIR SINE MIR 66 144 -64 191 265 93 60 chr20 43600795 43601010 -28552872 - L2 LINE L2 -252 3061 2840 259 299 130 10 chr20 43601066 43601273 -28552609 - L2 LINE L2 -653 2661 2430 278 278 0 81 chr20 43601837 43602010 -28551872 + G-rich Low_complexity Low_complexity 6 164 0 205 329 29 0 chr20 43602607 43602677 -28551205 + L2 LINE L2 3155 3226 -46 1230 175 0 0 chr20 43602702 43603065 -28550817 + (TGGA)n Simple_repeat Simple_repeat 1 363 0 1737 136 88 0 chr20 43603395 43603667 -28550215 + AluSq SINE Alu 3 298 -15 1228 158 0 0 chr20 43603669 43603846 -28550036 + AluJb SINE Alu 136 312 0 943 190 98 0 chr20 43604664 43604869 -28549013 + MSTA LTR MaLR 164 388 -40 209 266 165 0 chr20 43605197 43605276 -28548606 + MIR SINE MIR 58 149 -59 3209 198 37 67 chr20 43605281 43605334 -28548548 + L1M4 LINE L1 4141 4194 -1952 2338 100 6 19 chr20 43605334 43605645 -28548237 + AluSp SINE Alu 1 307 -6 3209 198 37 67 chr20 43605645 43605726 -28548156 + L1M4 LINE L1 4194 4276 -1870 1812 153 22 0 chr20 43605726 43605994 -28547888 + AluJo SINE Alu 31 304 -8 3209 198 37 67 chr20 43605994 43606750 -28547132 + L1M4 LINE L1 4276 5005 -1141 2569 66 0 7 chr20 43606751 43607055 -28546827 + AluY SINE Alu 3 304 -7 1546 169 118 87 chr20 43607060 43607400 -28546482 + MSTA LTR MaLR 1 329 -99 2244 99 7 3 chr20 43607400 43607692 -28546190 + AluSg SINE Alu 1 293 -17 1546 169 118 87 chr20 43607692 43607720 -28546162 + MSTA LTR MaLR 329 355 -73 2618 74 0 0 chr20 43607720 43608031 -28545851 - AluY SINE Alu 0 311 1 1546 169 118 87 chr20 43608031 43608076 -28545806 + MSTA LTR MaLR 355 428 0 2432 155 2 2 chr20 43608076 43608483 -28545399 + MSTA-int LTR MaLR 1 407 -1244 2182 59 63 0 chr20 43608484 43608793 -28545089 + AluY SINE Alu 1 326 0 437 119 0 0 chr20 43608801 43608868 -28545014 + L1MA1 LINE L1 6230 6296 -6 1148 161 75 89 chr20 43608892 43609172 -28544710 + AluJb SINE Alu 11 286 -26 309 51 0 0 chr20 43609172 43609211 -28544671 + (GGGGA)n Simple_repeat Simple_repeat 4 42 0 1673 162 0 57 chr20 43611044 43611359 -28542523 + AluJo SINE Alu 11 307 -5 2339 86 0 13 chr20 43611359 43611660 -28542222 + AluSg SINE Alu 12 308 -2 2125 131 0 0 chr20 43611662 43611960 -28541922 + AluSx SINE Alu 1 298 -14 1997 142 16 13 chr20 43612360 43612663 -28541219 - AluJb SINE Alu -7 305 2 180 97 0 0 chr20 43612675 43612706 -28541176 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1946 154 11 0 chr20 43612708 43612987 -28540895 - AluJo SINE Alu -30 282 1 510 328 140 9 chr20 43613065 43613294 -28540588 + MIR SINE MIR 4 262 0 2224 101 3 22 chr20 43613299 43613615 -28540267 - AluSx SINE Alu -2 310 1 225 297 51 51 chr20 43614760 43614878 -28539004 + MIR SINE MIR 17 134 -128 296 273 0 13 chr20 43615434 43615511 -28538371 + G-rich Low_complexity Low_complexity 3 78 0 215 310 28 0 chr20 43617584 43617655 -28536227 + MIR SINE MIR 99 171 -91 258 314 20 0 chr20 43617674 43617776 -28536106 + MER112 DNA MER1_type 33 136 -124 1442 167 20 59 chr20 43617778 43618083 -28535799 - AluJo SINE Alu -9 303 11 2002 123 0 16 chr20 43618112 43618429 -28535453 - AluSx SINE Alu 0 312 1 25 0 0 0 chr20 43618829 43618854 -28535028 + GC_rich Low_complexity Low_complexity 1 25 0 28 61 0 0 chr20 43619039 43619088 -28534794 + GC_rich Low_complexity Low_complexity 1 49 0 29 60 0 0 chr20 43619578 43619628 -28534254 + GC_rich Low_complexity Low_complexity 1 50 0 21 0 0 0 chr20 43619861 43619882 -28534000 + GC_rich Low_complexity Low_complexity 1 21 0 28 48 0 0 chr20 43620082 43620124 -28533758 + GC_rich Low_complexity Low_complexity 1 42 0 2208 108 0 0 chr20 43621883 43622179 -28531703 - AluSc SINE Alu -13 296 1 2082 109 7 3 chr20 43622796 43623089 -28530793 + AluSx SINE Alu 19 312 0 2087 131 0 0 chr20 43623717 43624007 -28529875 + AluSg SINE Alu 1 290 -20 28 0 0 0 chr20 43627019 43627047 -28526835 + AT_rich Low_complexity Low_complexity 1 28 0 2110 112 3 20 chr20 43627762 43628065 -28525817 + AluSx SINE Alu 1 298 -14 989 304 121 20 chr20 43629295 43629791 -28524091 - L2 LINE L2 -491 2823 2278 214 171 24 0 chr20 43633867 43633908 -28519974 + CT-rich Low_complexity Low_complexity 1 42 0 186 43 0 0 chr20 43634116 43634139 -28519743 + (CAG)n Simple_repeat Simple_repeat 2 24 0 344 330 139 24 chr20 43634867 43635076 -28518806 + MIR SINE MIR 22 254 -8 2217 99 0 10 chr20 43635551 43635854 -28518028 - AluSq SINE Alu -9 304 5 382 250 23 0 chr20 43637081 43637169 -28516713 - Tigger5 DNA MER2_type 0 2323 2234 1391 154 75 19 chr20 43637988 43638254 -28515628 + AluJb SINE Alu 2 282 -30 582 296 42 14 chr20 43638927 43639140 -28514742 - MER20 DNA MER1_type 0 219 1 26 50 0 0 chr20 43639865 43639905 -28513977 + GC_rich Low_complexity Low_complexity 1 40 0 266 269 0 34 chr20 43640079 43640198 -28513684 + C-rich Low_complexity Low_complexity 3 117 0 21 0 0 0 chr20 43640304 43640325 -28513557 + GC_rich Low_complexity Low_complexity 1 21 0 29 94 0 0 chr20 43640636 43640721 -28513161 + GC_rich Low_complexity Low_complexity 1 85 0 229 183 33 75 chr20 43640889 43641009 -28512873 + (CGGGG)n Simple_repeat Simple_repeat 3 117 0 477 257 84 106 chr20 43642156 43642393 -28511489 - MIR SINE MIR -10 252 21 485 263 83 74 chr20 43643399 43643606 -28510276 - MLT1B LTR MaLR 0 390 177 2116 69 12 62 chr20 43643606 43643926 -28509956 - AluSp SINE Alu -9 304 1 485 263 83 74 chr20 43643926 43644056 -28509826 - MLT1B LTR MaLR -213 177 50 194 195 49 0 chr20 43644513 43644554 -28509328 + MIR SINE MIR 220 262 0 235 319 0 0 chr20 43646605 43646674 -28507208 + MIR SINE MIR 101 169 -93 249 277 24 0 chr20 43647304 43647387 -28506495 + MER117 DNA MER1_type 97 181 -16 738 129 9 0 chr20 43647642 43647758 -28506124 - AluJb SINE Alu 0 312 196 208 273 21 86 chr20 43648836 43649023 -28504859 + C-rich Low_complexity Low_complexity 3 177 0 2273 132 24 16 chr20 43649967 43650339 -28503543 - THE1C LTR MaLR 0 375 1 279 279 90 16 chr20 43650567 43650689 -28503193 - HAL1 LINE L1 -357 2150 2020 315 250 189 34 chr20 43650744 43650892 -28502990 - HAL1 LINE L1 -670 1837 1667 521 311 148 21 chr20 43650899 43651326 -28502556 - L1MC4 LINE L1 -48 7994 7514 261 263 128 83 chr20 43651731 43652121 -28501761 - HAL1 LINE L1 -1148 1359 943 1797 143 6 38 chr20 43652121 43652435 -28501447 + AluJb SINE Alu 1 304 -8 261 263 128 83 chr20 43652435 43652504 -28501378 - HAL1 LINE L1 -1564 943 879 257 342 18 0 chr20 43652768 43652879 -28501003 - HAL1 LINE L1 -2285 222 110 1054 176 0 0 chr20 43655379 43655561 -28498321 + MER46A DNA MER2_type 18 199 -37 756 171 0 0 chr20 43657258 43657422 -28496460 + (GGGTG)n Simple_repeat Simple_repeat 3 166 0 1624 198 0 22 chr20 43658939 43659258 -28494624 + AluJb SINE Alu 1 312 0 2239 93 0 13 chr20 43659294 43659604 -28494278 - AluSx SINE Alu -6 306 1 853 78 35 0 chr20 43660883 43660998 -28492884 + AluSq/x SINE Alu 14 132 -180 868 200 0 0 chr20 43661764 43661924 -28491958 + AluJb SINE Alu 153 312 0 230 281 91 33 chr20 43662152 43662273 -28491609 - MIR SINE MIR -29 233 106 345 294 10 0 chr20 43663059 43663161 -28490721 + MER63A DNA MER1_type 71 173 -37 640 184 120 0 chr20 43663344 43663502 -28490380 - LTR55 LTR ERV -321 227 51 230 345 0 0 chr20 43663509 43663593 -28490289 + L1MA9 LINE L1 6224 6307 -5 2276 106 0 0 chr20 43663654 43663956 -28489926 + AluSq SINE Alu 12 313 0 1610 151 10 53 chr20 43663958 43664035 -28489847 + AluJb SINE Alu 1 80 -232 2339 88 3 0 chr20 43664035 43664343 -28489539 - AluSg SINE Alu -1 309 1 1610 151 10 53 chr20 43664343 43664569 -28489313 + AluJb SINE Alu 80 291 -21 1540 166 19 55 chr20 43664816 43665124 -28488758 - AluJo SINE Alu -15 297 1 184 313 90 0 chr20 43665353 43665420 -28488462 + L3 LINE CR1 1186 1258 -319 1734 159 24 0 chr20 43665539 43665828 -28488054 + AluJb SINE Alu 1 296 -16 1982 140 0 3 chr20 43666497 43666797 -28487085 + AluSx SINE Alu 1 299 -13 2342 70 0 3 chr20 43667224 43667523 -28486359 + AluY SINE Alu 1 298 -13 2448 67 0 3 chr20 43667890 43668202 -28485680 - AluY SINE Alu 0 311 1 1666 164 3 39 chr20 43668738 43668881 -28485001 + AluJo SINE Alu 2 149 -163 2306 81 0 7 chr20 43668881 43669179 -28484703 + AluY SINE Alu 1 296 -15 1666 164 3 39 chr20 43669179 43669345 -28484537 + AluJo SINE Alu 149 300 -12 405 181 53 0 chr20 43669345 43669439 -28484443 - MLT1C LTR MaLR -362 105 7 264 321 50 75 chr20 43670217 43670376 -28483506 + MER5B DNA MER1_type 3 157 -21 2031 131 7 0 chr20 43670428 43670726 -28483156 + AluSx SINE Alu 1 300 -12 2006 122 7 17 chr20 43670740 43671035 -28482847 + AluJb SINE Alu 7 298 -14 183 294 0 39 chr20 43671733 43671784 -28482098 + L3 LINE CR1 1519 1567 -10 196 376 112 8 chr20 43671892 43672017 -28481865 - L2 LINE L2 0 3313 3176 250 329 29 21 chr20 43672415 43672555 -28481327 - L2 LINE L2 -326 2987 2847 1920 141 17 7 chr20 43673236 43673533 -28480349 + AluJb SINE Alu 1 300 -12 1832 115 72 0 chr20 43673533 43673811 -28480071 + AluSx SINE Alu 1 298 -14 643 203 52 0 chr20 43673964 43674117 -28479765 - MER20 DNA MER1_type -58 161 1 736 174 94 13 chr20 43674144 43674293 -28479589 + AluSp SINE Alu 137 297 -16 1894 121 46 26 chr20 43674711 43675017 -28478865 - AluSx SINE Alu 0 312 1 739 100 0 0 chr20 43675017 43675117 -28478765 - AluJb SINE Alu -9 303 204 2183 114 3 22 chr20 43675136 43675453 -28478429 - AluSx SINE Alu -1 311 1 711 122 0 0 chr20 43675461 43675559 -28478323 - FLAM_C SINE Alu -8 135 38 1203 142 51 0 chr20 43675565 43675762 -28478120 - AluJb SINE Alu -21 291 85 2104 98 4 0 chr20 43677619 43677926 -28475956 + AluSp SINE Alu 6 313 0 314 254 57 49 chr20 43677967 43678089 -28475793 - MIR SINE MIR -46 216 94 312 327 73 24 chr20 43678517 43678682 -28475200 + L1M4c LINE L1 1747 1919 -4465 551 254 194 7 chr20 43680429 43680717 -28473165 - Charlie2 DNA MER1_type -471 2391 2050 516 213 48 53 chr20 43680717 43680905 -28472977 - Charlie2 DNA MER1_type -2630 232 46 311 237 13 0 chr20 43680982 43681058 -28472824 + MIR SINE MIR 81 157 -105 2263 86 0 3 chr20 43681078 43681382 -28472500 + AluSg SINE Alu 2 304 -6 270 329 116 0 chr20 43681390 43681554 -28472328 - LTR33 LTR ERVL -34 487 305 2075 139 0 0 chr20 43681828 43682130 -28471752 + AluSq SINE Alu 1 302 -11 2324 81 7 3 chr20 43682131 43682439 -28471443 + AluSg SINE Alu 1 309 -1 198 167 0 0 chr20 43682443 43682479 -28471403 + (TA)n Simple_repeat Simple_repeat 2 37 0 1004 152 0 29 chr20 43682480 43682651 -28471231 + AluSg/x SINE Alu 126 291 -21 499 207 140 6 chr20 43682652 43682816 -28471066 + MER3 DNA MER1_type 19 204 -5 524 245 43 7 chr20 43683174 43683313 -28470569 + MIR SINE MIR 73 216 -46 2196 287 135 25 chr20 43683313 43683518 -28470364 - L1MEc LINE L1 -1673 4542 4361 2412 93 0 0 chr20 43683518 43683829 -28470053 - AluSx SINE Alu -1 311 1 2196 287 135 25 chr20 43683829 43684989 -28468893 - L1MEc LINE L1 -1854 4361 3027 1245 51 13 0 chr20 43684991 43685147 -28468735 + AluY SINE Alu 142 299 -12 651 219 0 0 chr20 43685147 43685311 -28468571 - L1MEc LINE L1 -3180 3035 2872 1456 164 3 66 chr20 43685366 43685653 -28468229 - AluJo SINE Alu -43 269 1 430 115 23 0 chr20 43685654 43685741 -28468141 + MER2 DNA MER2_type 123 211 -134 372 235 74 6 chr20 43685852 43686014 -28467868 - L1MEc LINE L1 -3387 2828 2656 1632 161 70 7 chr20 43686041 43686326 -28467556 + AluJo SINE Alu 1 303 -9 1484 190 22 4 chr20 43686337 43686605 -28467277 - AluJo SINE Alu -39 273 1 1143 280 82 30 chr20 43686610 43686665 -28467217 - L1MEc LINE L1 -4080 2316 2265 2385 74 3 0 chr20 43686665 43686963 -28466919 - AluSg SINE Alu -11 299 1 1143 280 82 30 chr20 43686963 43687629 -28466253 - L1MEc LINE L1 -4131 2265 1558 301 315 19 0 chr20 43687632 43687740 -28466142 + L1MD3 LINE L1 7721 7830 -165 338 324 29 0 chr20 43688016 43688155 -28465727 + L1MC4 LINE L1 6459 6601 -1441 243 203 34 0 chr20 43688457 43688516 -28465366 + L1MC4 LINE L1 7981 8041 -1 1716 270 95 33 chr20 43689008 43689733 -28464149 - MER21B LTR ERV1 -52 811 42 286 333 0 0 chr20 43689744 43689825 -28464057 - MER21B LTR ERV1 -774 89 9 1035 90 0 0 chr20 43690958 43691091 -28462791 + AluSq/x SINE Alu 1 133 -179 31 0 0 0 chr20 43691096 43691127 -28462755 + AT_rich Low_complexity Low_complexity 1 31 0 40 79 0 0 chr20 43691572 43691661 -28462221 + AT_rich Low_complexity Low_complexity 1 89 0 2392 76 0 0 chr20 43691915 43692219 -28461663 + AluYa5 SINE Alu 1 304 -7 767 179 0 0 chr20 43693031 43693148 -28460734 + AluJo SINE Alu 1 117 -185 180 97 0 0 chr20 43693148 43693179 -28460703 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 906 160 72 33 chr20 43693198 43693379 -28460503 + AluJo SINE Alu 115 302 -10 1824 168 10 0 chr20 43693391 43693700 -28460182 + AluJb SINE Alu 1 312 0 2342 85 0 19 chr20 43693747 43694066 -28459816 + AluSq SINE Alu 1 313 0 2130 124 0 0 chr20 43694115 43694413 -28459469 + AluSx SINE Alu 1 298 -14 2372 73 0 3 chr20 43696364 43696664 -28457218 + AluY SINE Alu 1 299 -12 2283 83 0 32 chr20 43696693 43697005 -28456877 - AluSx SINE Alu -10 302 1 812 139 0 8 chr20 43699325 43699469 -28454413 + AluJb SINE Alu 172 312 0 2392 64 0 3 chr20 43699473 43699768 -28454114 + AluY SINE Alu 3 296 -15 939 205 75 4 chr20 43700527 43700781 -28453101 - L1MB7 LINE L1 -22 6162 5891 2280 101 3 0 chr20 43701023 43701329 -28452553 - AluSx SINE Alu -5 307 1 495 0 0 0 chr20 43701338 43701393 -28452489 + (TG)n Simple_repeat Simple_repeat 1 55 0 342 0 0 0 chr20 43701392 43701430 -28452452 + (GA)n Simple_repeat Simple_repeat 1 38 0 * 738 92 0 0 chr20 43701431 43701529 -28452353 - AluSg/x SINE Alu -35 275 178 481 236 113 78 chr20 43701691 43701751 -28452131 - MLT1B LTR MaLR -2 388 332 1877 134 33 10 chr20 43701751 43702056 -28451826 + AluSx SINE Alu 1 312 0 481 236 113 78 chr20 43702056 43702330 -28451552 - MLT1B LTR MaLR -58 332 42 1928 140 0 0 chr20 43702399 43702677 -28451205 - AluSx SINE Alu -34 278 1 319 205 262 0 chr20 43703655 43703777 -28450105 + L1MB3 LINE L1 6028 6181 -2 1825 76 121 11 chr20 43703786 43704050 -28449832 + AluSc SINE Alu 1 293 -16 261 0 0 0 chr20 43704052 43704081 -28449801 + (TA)n Simple_repeat Simple_repeat 2 30 0 293 297 55 41 chr20 43704083 43704302 -28449580 + L1MD2 LINE L1 6124 6345 -14 580 330 98 21 chr20 43706298 43706777 -28447105 - MLT1K LTR MaLR -9 579 64 241 263 61 71 chr20 43707314 43707413 -28446469 - MIR SINE MIR -150 112 15 298 299 46 0 chr20 43707862 43707949 -28445933 + MIR SINE MIR 41 131 -77 272 345 41 48 chr20 43708309 43708454 -28445428 + MIR3 SINE MIR 3 146 -62 241 291 179 26 chr20 43709002 43709153 -28444729 + L2 LINE L2 3079 3252 -20 262 189 8 58 chr20 43709894 43710246 -28443636 + G-rich Low_complexity Low_complexity 1 334 0 347 236 0 32 chr20 43710281 43710725 -28443157 + G-rich Low_complexity Low_complexity 1 429 0 194 173 0 19 chr20 43714043 43714095 -28439787 + CT-rich Low_complexity Low_complexity 1 51 0 33 43 0 0 chr20 43716887 43716934 -28436948 + GC_rich Low_complexity Low_complexity 1 47 0 21 36 0 0 chr20 43717026 43717054 -28436828 + GC_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr20 43717115 43717137 -28436745 + GC_rich Low_complexity Low_complexity 1 22 0 30 59 0 0 chr20 43717277 43717328 -28436554 + GC_rich Low_complexity Low_complexity 1 51 0 193 57 57 0 chr20 43717336 43717371 -28436511 + C-rich Low_complexity Low_complexity 105 141 0 189 313 0 0 chr20 43719553 43719601 -28434281 + MIR SINE MIR 77 124 -138 264 281 10 0 chr20 43721367 43721463 -28432419 + LTR16B LTR ERVL 356 452 -12 492 285 213 16 chr20 43721477 43722146 -28431736 - L2 LINE L2 -241 3072 2248 358 279 132 52 chr20 43722727 43723075 -28430807 - MLT1K LTR MaLR -18 570 195 825 165 0 0 chr20 43723521 43723654 -28430228 + FLAM_C SINE Alu 1 133 -10 375 303 0 7 chr20 43725680 43725825 -28428057 + (TG)n Simple_repeat Simple_repeat 1 144 0 416 151 36 6 chr20 43726054 43726220 -28427662 + (CA)n Simple_repeat Simple_repeat 1 171 0 180 149 28 28 chr20 43726233 43726340 -28427542 + (CA)n Simple_repeat Simple_repeat 1 107 0 284 277 17 0 chr20 43726380 43726499 -28427383 + (CA)n Simple_repeat Simple_repeat 1 121 0 180 135 0 0 chr20 43726510 43726547 -28427335 + (CA)n Simple_repeat Simple_repeat 1 37 0 456 256 29 0 chr20 43726592 43726764 -28427118 + (CA)n Simple_repeat Simple_repeat 1 177 0 356 257 23 17 chr20 43726701 43726876 -28427006 + (CTCA)n Simple_repeat Simple_repeat 3 178 0 * 185 185 15 0 chr20 43726888 43726953 -28426929 + (CA)n Simple_repeat Simple_repeat 1 66 0 246 222 16 0 chr20 43726966 43727029 -28426853 + (CA)n Simple_repeat Simple_repeat 1 64 0 460 196 5 58 chr20 43727041 43727230 -28426652 + (CA)n Simple_repeat Simple_repeat 1 179 0 427 214 40 17 chr20 43727149 43727322 -28426560 + (CTCA)n Simple_repeat Simple_repeat 2 178 0 * 491 232 5 38 chr20 43727355 43727540 -28426342 + (CA)n Simple_repeat Simple_repeat 1 179 0 235 185 0 42 chr20 43727580 43727699 -28426183 + (CA)n Simple_repeat Simple_repeat 1 114 0 353 307 18 0 chr20 43729527 43729641 -28424241 - MER45A DNA AcHobo 0 178 63 523 215 60 93 chr20 43730749 43731007 -28422875 + MLT1J LTR MaLR 136 469 -146 249 249 95 77 chr20 43730980 43731149 -28422733 + MLT1J LTR MaLR 305 476 -35 * 294 301 0 0 chr20 43732412 43732485 -28421397 + MIR SINE MIR 80 152 -110 409 273 16 33 chr20 43733010 43733131 -28420751 + MIR SINE MIR 92 210 -52 291 71 0 0 chr20 43733146 43733188 -28420694 + (CAT)n Simple_repeat Simple_repeat 1 42 0 305 259 205 12 chr20 43734344 43734510 -28419372 - MLT1K LTR MaLR -44 544 347 322 273 0 0 chr20 43734621 43734698 -28419184 - MLT1K LTR MaLR -320 268 192 329 244 130 73 chr20 43734774 43734897 -28418985 - MIR SINE MIR -117 145 16 223 233 0 0 chr20 43735648 43735708 -28418174 + G-rich Low_complexity Low_complexity 6 65 0 200 206 0 0 chr20 43735731 43735765 -28418117 + (CCCCAG)n Simple_repeat Simple_repeat 1 34 0 2083 113 3 0 chr20 43736852 43737153 -28416729 - AluSq SINE Alu -11 302 1 201 305 126 11 chr20 43737224 43737319 -28416563 + L2 LINE L2 3208 3313 0 750 284 55 5 chr20 43737416 43737634 -28416248 - MIR SINE MIR -32 230 2 1253 37 0 117 chr20 43738176 43738364 -28415518 - AluY SINE Alu -17 294 129 286 311 19 19 chr20 43740539 43740671 -28413211 + MER5A DNA MER1_type 6 148 -41 37 0 0 0 chr20 43740835 43740872 -28413010 + AT_rich Low_complexity Low_complexity 1 37 0 2000 95 27 10 chr20 43742098 43742393 -28411489 - AluSx SINE Alu -12 300 1 262 307 102 0 chr20 43743233 43743370 -28410512 - MER3 DNA MER1_type -6 203 53 181 0 0 65 chr20 43744582 43744613 -28409269 + (GGA)n Simple_repeat Simple_repeat 3 31 0 2313 88 7 0 chr20 43744658 43744963 -28408919 - AluSg SINE Alu -3 307 1 2200 122 0 3 chr20 43745143 43745454 -28408428 - AluSx SINE Alu 0 312 3 279 0 0 0 chr20 43745674 43745705 -28408177 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1555 170 7 31 chr20 43745710 43745999 -28407883 - AluJo SINE Alu -30 282 1 2068 96 13 19 chr20 43746562 43746875 -28407007 - AluSx SINE Alu -1 311 1 262 211 0 0 chr20 43747140 43747192 -28406690 + L2 LINE L2 3221 3272 0 1446 222 3 13 chr20 43747640 43747976 -28405906 + AluJb SINE Alu 1 312 0 2330 50 3 50 chr20 43748039 43748357 -28405525 - AluY SINE Alu -6 305 3 2306 90 3 0 chr20 43748409 43748709 -28405173 - AluSp SINE Alu -12 301 1 1953 169 0 6 chr20 43748871 43749185 -28404697 - AluJb SINE Alu 0 312 1 484 210 42 17 chr20 43749194 43749210 -28404672 - L1MA10 LINE L1 0 6334 6319 331 285 86 20 chr20 43749210 43749361 -28404521 - L1ME1 LINE L1 -5 6161 6001 1960 199 92 3 chr20 43749630 43750021 -28403861 - MSTB LTR MaLR 0 426 1 480 280 65 52 chr20 43750133 43750458 -28403424 - L1MC5 LINE L1 -750 7211 6883 723 216 46 0 chr20 43750507 43750701 -28403181 - MSTD LTR MaLR 0 396 194 500 246 47 20 chr20 43750718 43750785 -28403097 - MSTC LTR MaLR -154 242 178 2045 107 0 21 chr20 43750785 43751099 -28402783 - AluSq SINE Alu 0 308 1 500 246 47 20 chr20 43751099 43751262 -28402620 - MSTC LTR MaLR -218 178 4 2133 89 0 48 chr20 43752100 43752413 -28401469 - AluSx SINE Alu -13 299 2 2040 140 0 3 chr20 43752472 43752806 -28401076 - AluSx SINE Alu 0 312 1 2357 80 0 0 chr20 43754717 43755016 -28398866 - AluSx SINE Alu -13 299 1 1888 152 0 7 chr20 43757707 43758009 -28395873 + AluJo SINE Alu 1 300 -12 2137 106 3 7 chr20 43758037 43758338 -28395544 + AluSc SINE Alu 1 300 -9 1780 145 43 0 chr20 43758773 43759055 -28394827 - AluSx SINE Alu -18 294 1 2473 59 0 3 chr20 43760785 43761092 -28392790 + AluY SINE Alu 1 306 -5 948 242 156 15 chr20 43761604 43762687 -28391195 - L1MD3 LINE L1 -10 7985 6596 1572 174 48 24 chr20 43762848 43763142 -28390740 + AluJo SINE Alu 1 301 -1 614 227 55 32 chr20 43763643 43763863 -28390019 - L1MC5 LINE L1 -134 7827 7603 1593 176 35 7 chr20 43763972 43764261 -28389621 + AluJb SINE Alu 1 297 -15 268 179 18 0 chr20 43764378 43764434 -28389448 - L1MC4 LINE L1 -1050 6992 6936 420 351 193 42 chr20 43764438 43764879 -28389003 - L1MC4a LINE L1 -1007 6801 6428 2222 72 6 50 chr20 43764879 43765198 -28388684 - AluSg SINE Alu -5 305 1 420 351 193 42 chr20 43765198 43765545 -28388337 - L1MC4a LINE L1 -1380 6428 5894 1699 156 3 47 chr20 43765594 43765785 -28388097 - AluJo SINE Alu -5 307 134 2077 104 0 10 chr20 43765785 43766074 -28387808 + AluSg SINE Alu 9 294 -16 1699 156 3 47 chr20 43766074 43766203 -28387679 - AluJo SINE Alu -178 134 1 411 332 86 4 chr20 43766232 43766476 -28387406 - L1MC4a LINE L1 -2012 5796 5533 222 261 6 51 chr20 43767299 43767475 -28386407 + CT-rich Low_complexity Low_complexity 2 169 0 * 435 84 0 215 chr20 43767395 43767609 -28386273 + (TCTCCC)n Simple_repeat Simple_repeat 3 170 0 475 91 0 201 chr20 43767643 43768082 -28385800 + (TCTCCC)n Simple_repeat Simple_repeat 1 350 0 2061 129 0 0 chr20 43768458 43768753 -28385129 - AluSx SINE Alu -17 295 1 250 317 14 14 chr20 43769590 43769624 -28384258 + (TG)n Simple_repeat Simple_repeat 2 35 -111 1573 188 17 7 chr20 43769624 43769912 -28383970 + AluJo SINE Alu 7 297 -15 250 317 14 14 chr20 43769912 43770022 -28383860 + (TG)n Simple_repeat Simple_repeat 34 146 0 667 194 85 24 chr20 43772055 43772220 -28381662 + AluJo SINE Alu 125 299 -13 682 142 53 0 chr20 43772394 43772507 -28381375 - AluJb SINE Alu -6 306 188 1619 148 0 0 chr20 43772512 43772749 -28381133 - AluJb SINE Alu -75 237 1 349 196 65 11 chr20 43772752 43772844 -28381038 + HsTC2 DNA Tc2 1802 1898 0 2036 112 3 26 chr20 43772914 43773218 -28380664 - AluSx SINE Alu -15 297 1 2250 87 3 19 chr20 43773968 43774280 -28379602 + AluSx SINE Alu 1 307 -5 516 311 13 2 chr20 43778519 43778713 -28375169 - L1MB8 LINE L1 -2 6176 5974 1936 136 24 0 chr20 43779553 43779840 -28374042 + AluSx SINE Alu 1 294 -18 1880 169 6 13 chr20 43781366 43781680 -28372202 - AluJo SINE Alu 0 312 1 2172 113 0 3 chr20 43783168 43783470 -28370412 + AluSx SINE Alu 1 301 -11 22 0 0 0 chr20 43784180 43784202 -28369680 + AT_rich Low_complexity Low_complexity 1 22 0 23 54 0 0 chr20 43784278 43784315 -28369567 + AT_rich Low_complexity Low_complexity 1 37 0 1774 161 3 7 chr20 43784461 43784759 -28369123 - AluJo SINE Alu -15 297 1 273 295 86 0 chr20 43785167 43785306 -28368576 - L2 LINE L2 -531 2783 2633 970 234 18 0 chr20 43785933 43786159 -28367723 + MER44D DNA MER2_type 481 582 -23 342 235 66 94 chr20 43786492 43786623 -28367259 - MER5C DNA MER1_type -4 320 196 1995 136 0 3 chr20 43786623 43786931 -28366951 + AluSx SINE Alu 1 307 -5 342 235 66 94 chr20 43786931 43787012 -28366870 - MER5C DNA MER1_type -128 196 114 1695 152 3 71 chr20 43787236 43787404 -28366478 - AluJb SINE Alu -11 301 123 2313 73 0 22 chr20 43787404 43787721 -28366161 - AluY SINE Alu -1 310 1 2258 73 3 0 chr20 43787727 43788016 -28365866 - AluSq SINE Alu 0 313 24 1695 152 3 71 chr20 43788016 43788163 -28365719 - AluJb SINE Alu -194 118 1 1911 54 96 29 chr20 43789884 43790164 -28363718 - AluY SINE Alu -12 299 1 2440 80 3 0 chr20 43791941 43792253 -28361629 - AluSp SINE Alu 0 313 1 1773 137 25 14 chr20 43793269 43793553 -28360329 - AluJo SINE Alu -25 287 1 297 271 9 19 chr20 43796046 43796153 -28357729 + MLT1A1 LTR MaLR 227 332 -33 22 35 0 0 chr20 43796284 43796313 -28357569 + AT_rich Low_complexity Low_complexity 1 29 0 2056 132 3 13 chr20 43796320 43796630 -28357252 + AluSx SINE Alu 6 312 0 349 238 38 9 chr20 43796728 43796833 -28357049 - L1MC/D LINE L1 -929 5430 5323 1371 152 74 26 chr20 43796930 43797199 -28356683 - AluJb SINE Alu -24 288 7 770 195 59 14 chr20 43797959 43798180 -28355702 - Charlie1 DNA MER1_type -7 2754 2524 2090 99 0 14 chr20 43798629 43798945 -28354937 - AluSx SINE Alu 0 315 4 336 226 0 68 chr20 43799213 43799403 -28354479 + C-rich Low_complexity Low_complexity 2 178 0 268 206 18 91 chr20 43800032 43800197 -28353685 + G-rich Low_complexity Low_complexity 4 156 0 322 342 81 22 chr20 43801925 43802247 -28351635 - L1MC4a LINE L1 -1870 5938 5598 289 308 108 0 chr20 43802353 43802483 -28351399 - MER58A DNA MER1_type -51 173 30 291 239 0 0 chr20 43806587 43806654 -28347228 + G-rich Low_complexity Low_complexity 1 67 0 238 223 0 92 chr20 43810812 43810942 -28342940 + (CGAGG)n Simple_repeat Simple_repeat 2 119 0 186 216 0 0 chr20 43813276 43813313 -28340569 - MIR SINE MIR -114 148 112 309 395 0 6 chr20 43814840 43815002 -28338880 + G-rich Low_complexity Low_complexity 3 163 0 193 270 18 9 chr20 43815010 43815121 -28338761 + GA-rich Low_complexity Low_complexity 1 112 0 339 189 36 18 chr20 43815183 43815294 -28338588 + GA-rich Low_complexity Low_complexity 1 113 0 2339 75 13 0 chr20 43817011 43817317 -28336565 + AluSp SINE Alu 1 310 -3 314 266 11 60 chr20 43818099 43818457 -28335425 + G-rich Low_complexity Low_complexity 1 340 0 180 154 58 0 chr20 43822387 43822439 -28331443 + (CAGG)n Simple_repeat Simple_repeat 3 57 0 302 353 50 13 chr20 43822995 43823222 -28330660 + L1M4 LINE L1 4952 5200 -946 2139 117 10 0 chr20 43823222 43823529 -28330353 + AluSx SINE Alu 1 310 -2 302 353 50 13 chr20 43823529 43823681 -28330201 + L1M4 LINE L1 5200 5345 -801 234 0 0 0 chr20 43826649 43826675 -28327207 + (CAGCC)n Simple_repeat Simple_repeat 1 26 0 250 215 114 13 chr20 43828466 43828615 -28325267 + (CGGTG)n Simple_repeat Simple_repeat 1 164 0 2144 134 0 0 chr20 43829053 43829359 -28324523 + AluSx SINE Alu 1 306 -6 201 94 0 0 chr20 43831117 43831149 -28322733 + (GGGTG)n Simple_repeat Simple_repeat 5 36 0 214 143 0 54 chr20 43832010 43832066 -28321816 + (CTAGGG)n Simple_repeat Simple_repeat 6 58 0 310 264 23 35 chr20 43834477 43834651 -28319231 + (CA)n Simple_repeat Simple_repeat 2 173 0 2357 81 0 0 chr20 43836040 43836335 -28317547 + AluSg SINE Alu 1 295 -15 2205 71 3 0 chr20 43836511 43836794 -28317088 - AluY SINE Alu -2 309 26 1015 338 55 92 chr20 43837427 43837585 -28316297 + L1 LINE L1 2484 2646 -3500 2309 94 3 0 chr20 43837585 43837894 -28315988 - AluSp SINE Alu -3 310 1 1015 338 55 92 chr20 43837894 43838037 -28315845 + L1 LINE L1 2646 2793 -3353 2026 112 0 14 chr20 43838037 43838379 -28315503 + AluSx SINE Alu 2 339 0 1015 338 55 92 chr20 43838379 43838667 -28315215 + L1 LINE L1 2793 3090 -3056 993 208 52 24 chr20 43838667 43838879 -28315003 - MER20 DNA MER1_type -1 218 1 1015 338 55 92 chr20 43838879 43839304 -28314578 + L1 LINE L1 3090 3529 -2617 2229 85 3 3 chr20 43839304 43839598 -28314284 + AluSx SINE Alu 1 294 -18 1015 338 55 92 chr20 43839598 43839679 -28314203 + L1 LINE L1 3529 3506 -2640 2398 77 0 6 chr20 43839679 43839992 -28313890 + AluY SINE Alu 1 311 0 1015 338 55 92 chr20 43839992 43840166 -28313716 + L1 LINE L1 3505 3684 -2462 783 207 83 51 chr20 43840311 43840528 -28313354 + MER58A DNA MER1_type 1 224 0 2162 110 7 0 chr20 43840777 43841076 -28312806 + AluSp SINE Alu 1 301 -12 2046 142 3 0 chr20 43841147 43841449 -28312433 + AluSp SINE Alu 2 304 -9 370 347 0 7 chr20 43841470 43841614 -28312268 - MER104 DNA Tc2 -13 167 25 2071 102 37 10 chr20 43841737 43842032 -28311850 - AluSx SINE Alu -9 303 1 2090 93 55 0 chr20 43842296 43842586 -28311296 - AluSq SINE Alu -7 306 1 1448 147 0 26 chr20 43842593 43842612 -28311270 - AluJb SINE Alu -1 311 293 688 0 0 0 chr20 43842612 43842693 -28311189 - L1PA2 LINE L1 -3 6152 6072 1448 147 0 26 chr20 43842693 43842904 -28310978 - AluJb SINE Alu -19 293 87 240 210 74 25 chr20 43845207 43845288 -28308594 + L1MEd LINE L1 343 427 -5692 453 309 136 16 chr20 43845344 43845606 -28308276 + L1MEd LINE L1 531 760 -5550 2271 89 3 13 chr20 43845606 43845920 -28307962 + AluY SINE Alu 1 311 0 453 309 136 16 chr20 43845920 43846271 -28307611 + L1MEd LINE L1 760 1068 -5242 2422 72 0 7 chr20 43846271 43846577 -28307305 + AluY SINE Alu 1 304 -7 453 309 136 16 chr20 43846577 43846857 -28307025 + L1MEd LINE L1 1068 1575 -4735 789 185 0 0 chr20 43846942 43847120 -28306762 + (ATGGTG)n Simple_repeat Simple_repeat 3 180 0 443 261 11 0 chr20 43847157 43847333 -28306549 + (ATGGTG)n Simple_repeat Simple_repeat 1 178 0 208 233 33 0 chr20 43847333 43847393 -28306489 + G-rich Low_complexity Low_complexity 6 67 0 227 366 78 7 chr20 43848265 43848407 -28305475 + L2 LINE L2 3161 3312 -1 184 178 22 22 chr20 43848761 43848806 -28305076 + L3 LINE CR1 1400 1444 -133 228 229 86 19 chr20 43849009 43849114 -28304768 - MIR SINE MIR -64 144 33 322 292 0 23 chr20 43849608 43849738 -28304144 + (CCCCG)n Simple_repeat Simple_repeat 1 127 0 369 232 142 0 chr20 43850291 43850446 -28303436 + MLT1K LTR MaLR 304 480 -108 201 100 0 0 chr20 43851680 43851710 -28302172 + L2 LINE L2 3029 3058 -255 261 0 0 0 chr20 43851818 43851847 -28302035 + (TCCC)n Simple_repeat Simple_repeat 4 32 0 736 177 10 14 chr20 43857799 43858089 -28295793 + (TGGG)n Simple_repeat Simple_repeat 1 289 0 215 163 50 0 chr20 43858093 43858173 -28295709 + (TGGA)n Simple_repeat Simple_repeat 4 87 0 * 824 172 6 0 chr20 43858166 43858340 -28295542 + (TGGG)n Simple_repeat Simple_repeat 2 176 0 206 267 33 0 chr20 43858391 43858451 -28295431 - MIR3 SINE MIR -41 167 106 235 268 212 22 chr20 43860463 43860694 -28293188 - L2 LINE L2 -168 3104 2830 261 308 100 8 chr20 43860949 43861079 -28292803 + MIR SINE MIR 46 187 -75 199 336 22 59 chr20 43863364 43863523 -28290359 + MIR SINE MIR 35 187 -61 21 36 0 0 chr20 43864704 43864732 -28289150 + GC_rich Low_complexity Low_complexity 1 28 0 23 54 0 0 chr20 43864806 43864843 -28289039 + GC_rich Low_complexity Low_complexity 1 37 0 25 0 0 0 chr20 43864868 43864893 -28288989 + GC_rich Low_complexity Low_complexity 1 25 0 25 65 0 0 chr20 43865042 43865088 -28288794 + GC_rich Low_complexity Low_complexity 1 46 0 185 159 23 0 chr20 43865096 43865140 -28288742 + G-rich Low_complexity Low_complexity 3 47 0 209 224 0 35 chr20 43866651 43866709 -28287173 + G-rich Low_complexity Low_complexity 4 59 0 237 225 88 38 chr20 43867208 43867288 -28286594 - MIR3 SINE MIR -52 156 73 412 327 136 32 chr20 43870643 43871071 -28282811 - L1MEc LINE L1 -1206 1370 827 393 344 28 0 chr20 43872151 43872363 -28281519 + L1M4 LINE L1 5581 5798 -376 183 42 0 0 chr20 43872998 43873022 -28280860 + (AGGGGG)n Simple_repeat Simple_repeat 5 28 0 2229 93 13 0 chr20 43873633 43873933 -28279949 - AluSq SINE Alu -9 304 1 224 242 0 16 chr20 43874438 43874500 -28279382 + L2 LINE L2 3001 3061 -252 340 223 80 0 chr20 43874597 43874709 -28279173 - MER20 DNA MER1_type -96 123 3 199 344 52 0 chr20 43874738 43874834 -28279048 + L2 LINE L2 3143 3243 -29 1289 224 14 0 chr20 43874886 43875176 -28278706 + MER47A DNA MER2_type 73 366 0 2431 65 3 0 chr20 43876683 43876992 -28276890 - AluY SINE Alu -1 310 1 1105 60 0 0 chr20 43876992 43877126 -28276756 - AluY SINE Alu -177 134 1 2386 51 3 29 chr20 43877465 43877776 -28276106 + AluSp SINE Alu 1 303 -10 1240 93 0 0 chr20 43877776 43877937 -28275945 + AluY SINE Alu 133 293 -18 2320 69 0 0 chr20 43877956 43878244 -28275638 + AluY SINE Alu 7 294 -17 659 225 3 3 chr20 43879648 43879962 -28273920 + (ATG)n Simple_repeat Simple_repeat 1 314 0 302 227 13 78 chr20 43880456 43880521 -28273361 - L1MA10 LINE L1 -15 6319 6251 2365 68 0 3 chr20 43880521 43880813 -28273069 - AluY SINE Alu -20 291 1 302 227 13 78 chr20 43880813 43880901 -28272981 - L1MA10 LINE L1 -83 6251 6176 335 257 71 44 chr20 43880905 43881088 -28272794 - L1ME1 LINE L1 -89 6077 5890 447 246 42 0 chr20 43881092 43881210 -28272672 - L1ME1 LINE L1 -381 5785 5663 2294 104 0 0 chr20 43881210 43881519 -28272363 - AluSx SINE Alu -3 309 1 329 118 21 75 chr20 43881519 43881583 -28272299 - L1M4 LINE L1 -883 5263 5204 1444 190 39 16 chr20 43881583 43881888 -28271994 - AluJb SINE Alu 0 312 1 329 118 21 75 chr20 43881888 43881916 -28271966 - L1M4 LINE L1 -942 5204 5176 * 740 157 14 0 chr20 43881890 43882037 -28271845 - L1M4 LINE L1 -2448 3698 3550 2198 82 0 0 chr20 43882037 43882352 -28271530 + AluSg SINE Alu 1 315 0 505 102 11 0 chr20 43882352 43882440 -28271442 + L1MA3 LINE L1 5597 5685 -619 1196 138 0 0 chr20 43882440 43882614 -28271268 + AluSg/x SINE Alu 135 308 -4 2130 95 37 26 chr20 43882645 43883024 -28270858 + L1MA3 LINE L1 5921 6303 -2 2189 76 10 7 chr20 43883035 43883326 -28270556 - AluY SINE Alu -19 292 1 269 289 55 16 chr20 43883500 43883652 -28270230 - L1ME LINE L1 -421 5700 5542 232 158 61 37 chr20 43884373 43884455 -28269427 + (CTGGGG)n Simple_repeat Simple_repeat 4 87 0 251 336 55 16 chr20 43889228 43889356 -28264526 - L2 LINE L2 -504 2810 2678 186 103 0 0 chr20 43894061 43894090 -28259792 + (CACAG)n Simple_repeat Simple_repeat 5 33 0 223 319 110 21 chr20 43894272 43894463 -28259419 + L2 LINE L2 2856 3063 -250 324 228 40 40 chr20 43894784 43894885 -28258997 - MIR SINE MIR -141 121 21 1086 150 2 0 chr20 43895092 43895587 -28258295 + (TGG)n Simple_repeat Simple_repeat 1 496 0 184 281 94 42 chr20 43896067 43896163 -28257719 - MIR SINE MIR -143 119 19 1911 124 3 14 chr20 43896163 43896453 -28257429 - AluSx SINE Alu -15 297 11 2244 86 0 7 chr20 43896456 43896760 -28257122 - AluY SINE Alu -9 302 1 2184 107 0 0 chr20 43896807 43897097 -28256785 - AluSx SINE Alu -12 300 11 480 156 21 0 chr20 43897098 43897194 -28256688 - MER47A DNA MER2_type -188 178 81 483 324 50 22 chr20 43898128 43898307 -28255575 - MIR SINE MIR -46 216 33 619 220 124 98 chr20 43900416 43900835 -28253047 + MLT1C LTR MaLR 1 430 -37 1473 155 58 0 chr20 43901128 43901405 -28252477 + AluJb SINE Alu 1 293 -19 424 271 42 0 chr20 43901520 43901638 -28252244 - MIR SINE MIR -132 130 8 29 98 0 0 chr20 43904189 43904281 -28249601 + GC_rich Low_complexity Low_complexity 1 92 0 64 75 0 0 chr20 43904431 43904565 -28249317 + GC_rich Low_complexity Low_complexity 1 134 0 30 69 0 0 chr20 43904576 43904634 -28249248 + GC_rich Low_complexity Low_complexity 1 58 0 192 246 74 66 chr20 43905491 43905613 -28248269 - L2 LINE L2 -28 3244 3122 504 231 62 8 chr20 43907107 43907237 -28246645 - MER5A DNA MER1_type -2 187 51 356 351 43 13 chr20 43908709 43908867 -28245015 + MIR SINE MIR 13 175 -67 190 278 96 26 chr20 43909631 43909740 -28244142 - MIR3 SINE MIR -44 164 46 343 269 30 4 chr20 43910272 43910395 -28243487 - MIR SINE MIR -66 142 22 280 276 44 22 chr20 43911891 43912045 -28241837 - MIR SINE MIR -63 145 23 205 294 0 0 chr20 43913619 43913687 -28240195 + L2 LINE L2 3202 3269 -3 308 254 0 0 chr20 43914364 43914435 -28239447 - MER103 DNA DNA -82 84 14 348 282 11 60 chr20 43915503 43915667 -28238215 + MIR SINE MIR 33 190 -58 502 254 24 9 chr20 43917641 43917988 -28235894 + (CA)n Simple_repeat Simple_repeat 1 352 0 368 290 0 40 chr20 43918498 43918674 -28235208 + (TG)n Simple_repeat Simple_repeat 1 169 0 246 219 0 26 chr20 43918687 43918801 -28235081 + (TG)n Simple_repeat Simple_repeat 1 111 0 371 288 11 33 chr20 43918856 43919040 -28234842 + (TG)n Simple_repeat Simple_repeat 1 180 0 416 276 0 29 chr20 43919053 43919223 -28234659 + (TG)n Simple_repeat Simple_repeat 1 165 0 417 245 0 0 chr20 43919839 43919978 -28233904 + G-rich Low_complexity Low_complexity 3 141 0 246 270 70 35 chr20 43920519 43920634 -28233248 - MIR SINE MIR -72 136 18 241 233 107 29 chr20 43921660 43921763 -28232119 - MIR SINE MIR -117 145 35 304 204 84 43 chr20 43922257 43922373 -28231509 + MIR SINE MIR 16 136 -72 746 309 7 0 chr20 43923160 43923521 -28230361 + (CAG)n Simple_repeat Simple_repeat 1 363 0 190 280 242 0 chr20 43923757 43923889 -28229993 - MIR SINE MIR -92 170 7 294 234 33 23 chr20 43925241 43925344 -28228538 + MIR SINE MIR 76 181 -27 205 284 0 15 chr20 43925707 43925774 -28228108 + C-rich Low_complexity Low_complexity 5 70 0 303 230 15 22 chr20 43926176 43926311 -28227571 + (TG)n Simple_repeat Simple_repeat 1 134 0 1064 226 29 14 chr20 43926330 43926609 -28227273 + MLT1A1 LTR MaLR 1 283 -82 771 222 17 0 chr20 43926622 43926802 -28227080 + MER66A LTR ERV1 291 473 -5 615 307 62 4 chr20 43928139 43928413 -28225469 - L1PB4 LINE L1 -2 6154 5865 1272 243 63 0 chr20 43928622 43929080 -28224802 - L1MB7 LINE L1 -51 6133 5598 2195 120 0 0 chr20 43929080 43929379 -28224503 - AluSq SINE Alu -14 299 1 287 181 0 24 chr20 43929381 43929464 -28224418 + MER96B DNA MER1_type? 101 181 -236 1909 156 0 13 chr20 43930044 43930351 -28223531 - AluJo SINE Alu -9 303 1 1151 291 76 0 chr20 43932396 43932843 -28221039 - L1MB5 LINE L1 -8 6166 5686 419 315 131 2 chr20 43932959 43933190 -28220692 - L1ME3 LINE L1 -6 6164 5909 2384 174 105 0 chr20 43933190 43933620 -28220262 + MER66A LTR ERV1 1 475 -3 705 305 120 0 chr20 43933703 43933995 -28219887 - L1ME3 LINE L1 -396 5778 5452 324 303 98 0 chr20 43934001 43934123 -28219759 - MIR3 SINE MIR -65 143 10 309 222 49 0 chr20 43936553 43936634 -28217248 + MLT1A1 LTR MaLR 349 433 -34 709 211 96 50 chr20 43937469 43937749 -28216133 + LTR16A1 LTR ERVL 160 452 -5 245 370 46 17 chr20 43939393 43939566 -28214316 - MIR SINE MIR -45 217 40 216 301 75 15 chr20 43939593 43939726 -28214156 + (TTAGGG)n Simple_repeat Simple_repeat 5 145 0 470 294 67 112 chr20 43940029 43940536 -28213346 - L1ME4a LINE L1 -16 6105 5622 405 291 43 21 chr20 43940670 43940768 -28213114 - L1ME4a LINE L1 -595 5526 5432 2188 106 7 3 chr20 43940768 43941070 -28212812 - AluSp SINE Alu -10 303 1 405 291 43 21 chr20 43941070 43941312 -28212570 - L1ME4a LINE L1 -689 5432 5180 216 300 20 50 chr20 43941894 43941994 -28211888 + MIR SINE MIR 118 214 -48 995 167 31 21 chr20 43942333 43942525 -28211357 - AluJo SINE Alu -116 196 3 234 293 24 0 chr20 43942982 43943064 -28210818 - MIR SINE MIR -86 122 39 377 225 16 60 chr20 43943374 43943556 -28210326 + G-rich Low_complexity Low_complexity 6 179 0 329 303 82 0 chr20 43944599 43944721 -28209161 + Charlie5 DNA MER1_type 2419 2550 -62 217 213 0 0 chr20 43944963 43945010 -28208872 + MIR SINE MIR 103 149 -113 1369 237 63 5 chr20 43945219 43945632 -28208250 - MLT1C LTR MaLR -15 452 16 341 221 84 0 chr20 43945826 43945921 -28207961 - LTR16A1 LTR ERVL -14 443 341 379 185 0 125 chr20 43948117 43948301 -28205581 + C-rich Low_complexity Low_complexity 4 164 0 607 221 0 11 chr20 43948835 43949016 -28204866 + GA-rich Low_complexity Low_complexity 2 180 0 810 170 17 13 chr20 43949043 43949601 -28204281 + GA-rich Low_complexity Low_complexity 1 560 0 340 279 32 14 chr20 43949927 43950062 -28203820 - MIR SINE MIR -61 147 18 267 340 24 58 chr20 43950501 43950707 -28203175 - L2 LINE L2 -20 3252 3054 204 302 148 5 chr20 43951830 43951951 -28201931 - MIR SINE MIR -68 140 7 188 83 0 56 chr20 43953581 43953617 -28200265 + (TCTCTG)n Simple_repeat Simple_repeat 3 36 0 2014 139 13 23 chr20 44156220 44156530 -27997352 - AluJo SINE Alu -3 309 3 491 225 162 0 chr20 44156541 44156652 -27997230 - FLAM_A SINE Alu -4 129 1 2423 84 0 0 chr20 44157211 44157508 -27996374 - AluSg SINE Alu -13 297 1 2360 89 3 7 chr20 44157508 44157812 -27996070 - AluSg SINE Alu -7 303 1 28 0 0 0 chr20 44157821 44157849 -27996033 + AT_rich Low_complexity Low_complexity 1 28 0 2075 135 3 0 chr20 44158429 44158726 -27995156 + AluSx SINE Alu 1 298 -14 210 84 48 60 chr20 44158731 44158814 -27995068 + A-rich Low_complexity Low_complexity 4 85 0 184 333 63 18 chr20 44158816 44158878 -27995004 + MIR SINE MIR 31 102 -106 2555 68 0 3 chr20 44158878 44159188 -27994694 - AluY SINE Alu -2 309 1 184 333 63 18 chr20 44159188 44159236 -27994646 + MIR SINE MIR 102 146 -62 1005 120 38 36 chr20 44159991 44160605 -27993277 + (TA)n Simple_repeat Simple_repeat 1 615 0 1704 177 10 7 chr20 44160607 44160739 -27993143 + AluJb SINE Alu 1 131 -181 2301 105 0 3 chr20 44160739 44161044 -27992838 + AluSg SINE Alu 1 304 -6 1704 177 10 7 chr20 44161044 44161205 -27992677 + AluJb SINE Alu 131 295 -17 625 118 11 0 chr20 44161243 44161336 -27992546 - AluSg/x SINE Alu 0 310 217 248 167 0 19 chr20 44161490 44161544 -27992338 + CT-rich Low_complexity Low_complexity 1 53 0 * 300 137 0 0 chr20 44161533 44161584 -27992298 + (TC)n Simple_repeat Simple_repeat 2 52 0 186 43 0 0 chr20 44161585 44161608 -27992274 + (CCTG)n Simple_repeat Simple_repeat 2 24 0 23 54 0 0 chr20 44161758 44161795 -27992087 + AT_rich Low_complexity Low_complexity 1 37 0 609 185 104 7 chr20 44163444 44163579 -27990303 + MER58C DNA MER1_type 68 215 0 21 0 0 0 chr20 44163959 44163980 -27989902 + AT_rich Low_complexity Low_complexity 1 21 0 1647 228 18 23 chr20 44164866 44165301 -27988581 + L1M4 LINE L1 3867 4299 -1847 907 193 158 26 chr20 44165312 44165577 -27988305 + MLT1E1 LTR MaLR 2 301 -353 235 276 78 17 chr20 44165997 44166113 -27987769 + L3b LINE CR1 1290 1412 -171 216 305 117 31 chr20 44166748 44166876 -27987006 + MIR SINE MIR 101 239 -23 1474 211 13 58 chr20 44167631 44168010 -27985872 - L1MA10 LINE L1 0 6334 5973 354 319 108 25 chr20 44218105 44218262 -27935620 - MER5B DNA MER1_type -6 172 3 235 198 37 123 chr20 44218765 44218846 -27935036 + MER91B DNA MER1_type 2 75 -115 195 42 0 0 chr20 44219028 44219052 -27934830 + (TTTC)n Simple_repeat Simple_repeat 2 25 0 688 232 122 0 chr20 44221228 44221409 -27932473 + MIR SINE MIR 5 207 -55 904 191 43 14 chr20 44221409 44221618 -27932264 + MER20 DNA MER1_type 1 215 -4 567 134 0 0 chr20 44221618 44221735 -27932147 - AluSg/x SINE Alu 0 318 202 300 373 0 0 chr20 44222127 44222245 -27931637 - MIR3 SINE MIR -49 159 42 272 160 20 0 chr20 44222574 44222624 -27931258 + L2 LINE L2 3263 3313 0 368 319 21 21 chr20 44222647 44222791 -27931091 - MIR SINE MIR -102 160 17 2154 95 7 36 chr20 44222791 44223097 -27930785 - AluSg SINE Alu -13 297 1 1178 262 43 18 chr20 44223140 44223635 -27930247 - MLT1G LTR MaLR -22 549 4 281 233 0 0 chr20 44223653 44223713 -27930169 - L2 LINE L2 -32 3281 3222 241 256 247 27 chr20 44224024 44224243 -27929639 - L2 LINE L2 -667 2647 2381 383 328 81 34 chr20 44224315 44224495 -27929387 + MIR SINE MIR 7 202 -60 1382 196 87 0 chr20 44224495 44224770 -27929112 + AluJo SINE Alu 1 299 -13 383 328 81 34 chr20 44224770 44224824 -27929058 + MIR SINE MIR 202 252 -10 225 274 32 0 chr20 44224852 44224914 -27928968 + L1ME3A LINE L1 6107 6170 0 703 221 27 0 chr20 44225613 44225762 -27928120 - MER45A DNA AcHobo -24 154 2 321 205 184 47 chr20 44225957 44226106 -27927776 + L1ME LINE L1 5605 5776 -345 1920 163 3 3 chr20 44226462 44226785 -27927097 + AluJb SINE Alu 1 312 0 26 0 0 0 chr20 44226789 44226815 -27927067 + AT_rich Low_complexity Low_complexity 1 26 0 431 288 14 14 chr20 44228344 44228483 -27925399 + L2 LINE L2 2591 2729 -585 497 108 12 24 chr20 44228492 44228575 -27925307 - L2 LINE L2 -6 3307 3226 209 226 0 0 chr20 44228616 44228669 -27925213 + L2 LINE L2 2727 2779 -535 1164 237 101 30 chr20 44228682 44229190 -27924692 - MLT1G3 LTR MaLR -8 559 1 1275 303 30 2 chr20 44229210 44229669 -27924213 + L2 LINE L2 2805 3276 -37 2221 137 0 6 chr20 44230095 44230409 -27923473 - AluSx SINE Alu 0 312 1 514 274 19 23 chr20 44230459 44230674 -27923208 - MER113 DNA MER1_type? -307 214 1 428 294 7 20 chr20 44231015 44231168 -27922714 + MER5A DNA MER1_type 1 151 -38 434 174 17 11 chr20 44232006 44232184 -27921698 + (TG)n Simple_repeat Simple_repeat 1 179 0 560 149 17 6 chr20 44232222 44232397 -27921485 + (TG)n Simple_repeat Simple_repeat 2 178 0 1362 190 113 72 chr20 44232563 44232963 -27920919 - MER66A LTR ERV1 0 478 63 2528 51 0 0 chr20 44233000 44233294 -27920588 - AluY SINE Alu -17 294 1 595 283 17 6 chr20 44233390 44233570 -27920312 + MIR SINE MIR 4 185 -77 191 167 17 150 chr20 44234455 44234515 -27919367 - L2 LINE L2 0 3272 3221 201 74 0 0 chr20 44234706 44234733 -27919149 + (TCCC)n Simple_repeat Simple_repeat 4 30 0 1963 173 0 3 chr20 44234741 44235210 -27918672 - AluJo SINE Alu 0 468 1 238 213 25 12 chr20 44235448 44235528 -27918354 - L1ME3 LINE L1 -123 6039 5959 1974 151 24 0 chr20 44235722 44236020 -27917862 + AluJo SINE Alu 4 308 -4 1948 103 157 16 chr20 44236026 44236345 -27917537 - THE1B LTR MaLR 0 364 1 318 265 78 10 chr20 44236522 44236624 -27917258 - L1MD3 LINE L1 -22 7973 7865 2165 126 7 0 chr20 44236637 44236953 -27916929 - AluSx SINE Alu 0 318 1 2529 58 3 0 chr20 44236957 44237250 -27916632 - AluY SINE Alu -17 294 1 1705 153 10 49 chr20 44237383 44237530 -27916352 + AluJo SINE Alu 1 133 -179 2297 118 0 0 chr20 44237530 44237826 -27916056 + AluSx SINE Alu 1 296 -16 1705 153 10 49 chr20 44237826 44237966 -27915916 + AluJo SINE Alu 133 277 -35 612 274 158 14 chr20 44238116 44238331 -27915551 - MIR SINE MIR -16 246 1 262 292 71 67 chr20 44238676 44238767 -27915115 - MIR SINE MIR -14 248 159 1992 153 0 0 chr20 44238767 44239061 -27914821 + AluJb SINE Alu 9 302 -10 262 292 71 67 chr20 44239061 44239209 -27914673 - MIR SINE MIR -103 159 8 2546 84 0 0 chr20 44239562 44239870 -27914012 - AluSc SINE Alu -1 308 1 280 226 0 12 chr20 44239905 44239989 -27913893 - L1ME4a LINE L1 0 6121 6039 1895 144 4 0 chr20 44240076 44240354 -27913528 + AluJb SINE Alu 5 283 -29 249 225 180 15 chr20 44240480 44240614 -27913268 - MLT1I LTR MaLR 0 536 289 538 268 118 35 chr20 44240635 44240889 -27912993 - MLT1H LTR MaLR -245 304 30 370 250 27 76 chr20 44240917 44240941 -27912941 - L1ME4a LINE L1 -278 5843 5819 1982 168 0 3 chr20 44240941 44241251 -27912631 - AluJb SINE Alu -1 311 3 370 250 27 76 chr20 44241251 44241517 -27912365 - L1ME4a LINE L1 -302 5819 5483 200 31 62 0 chr20 44241522 44241554 -27912328 + (GTTTG)n Simple_repeat Simple_repeat 1 34 0 2299 112 0 10 chr20 44241835 44242139 -27911743 - AluSq SINE Alu -12 301 1 294 287 11 11 chr20 44242568 44242662 -27911220 + MIR SINE MIR 8 101 -161 234 62 0 0 chr20 44242663 44242695 -27911187 + (TTG)n Simple_repeat Simple_repeat 2 33 0 2301 66 7 24 chr20 44242718 44243039 -27910843 + AluY SINE Alu 1 316 0 535 72 0 0 chr20 44243052 44243121 -27910761 - FLAM SINE Alu -18 125 57 303 296 88 19 chr20 44243172 44243331 -27910551 + MIR SINE MIR 93 262 0 457 228 29 31 chr20 44243725 44243869 -27910013 - MIR SINE MIR -21 241 98 1956 164 0 16 chr20 44244780 44245210 -27908672 - AluJo SINE Alu 0 425 1 546 355 70 10 chr20 44245333 44245750 -27908132 + L2 LINE L2 2829 3270 -2 285 169 0 0 chr20 44245754 44245813 -27908069 + GA-rich Low_complexity Low_complexity 4 62 0 207 0 0 0 chr20 44246568 44246591 -27907291 + (TTCA)n Simple_repeat Simple_repeat 1 23 0 408 269 31 38 chr20 44246748 44246908 -27906974 + MER103 DNA DNA 8 166 0 190 360 0 50 chr20 44247103 44247203 -27906679 + MIR SINE MIR 108 202 -60 380 130 14 0 chr20 44247265 44247334 -27906548 + CT-rich Low_complexity Low_complexity 1 70 0 192 97 0 0 chr20 44247395 44247426 -27906456 + (TCCA)n Simple_repeat Simple_repeat 2 32 0 391 227 99 81 chr20 44247442 44247531 -27906351 + MIR SINE MIR 65 151 -111 2202 133 0 16 chr20 44247531 44247848 -27906034 + AluSx SINE Alu 1 312 0 391 227 99 81 chr20 44247848 44247930 -27905952 + MIR SINE MIR 151 239 -23 500 245 92 38 chr20 44248882 44249066 -27904816 + L1MCc LINE L1 834 1027 -5396 502 195 8 8 chr20 44249212 44249340 -27904542 + (CCCA)n Simple_repeat Simple_repeat 1 128 0 476 240 0 6 chr20 44249413 44249588 -27904294 + (TCCA)n Simple_repeat Simple_repeat 1 174 0 244 289 27 117 chr20 44249665 44249921 -27903961 + L2 LINE L2 2827 3059 -213 315 296 53 83 chr20 44251989 44252038 -27901844 - L2 LINE L2 0 3272 3223 2155 112 0 7 chr20 44252038 44252360 -27901522 - AluSx SINE Alu 0 320 1 315 296 53 83 chr20 44252360 44252478 -27901404 - L2 LINE L2 -49 3223 3109 195 220 95 38 chr20 44252554 44252666 -27901216 - L2 LINE L2 -333 2980 2867 312 336 42 0 chr20 44252751 44252870 -27901012 - MIR3 SINE MIR -37 171 48 478 189 322 7 chr20 44253820 44253963 -27899919 - MER5A DNA MER1_type -1 188 1 1081 261 69 26 chr20 44253964 44254386 -27899496 - LTR16A1 LTR ERVL -17 440 1 1644 248 61 23 chr20 44255747 44256190 -27897692 - LTR16C LTR ERVL 0 491 32 611 206 6 0 chr20 44256247 44256422 -27897460 + (ATG)n Simple_repeat Simple_repeat 1 176 0 747 181 0 0 chr20 44256459 44256614 -27897268 + (ATG)n Simple_repeat Simple_repeat 1 155 0 521 238 150 19 chr20 44256723 44256883 -27896999 - MIR SINE MIR -15 247 67 367 291 132 7 chr20 44257228 44257367 -27896515 - MIR SINE MIR -65 143 20 204 298 50 8 chr20 44257517 44257638 -27896244 + L2 LINE L2 2477 2602 -712 747 215 0 0 chr20 44257647 44257870 -27896012 + (ATGGTG)n Simple_repeat Simple_repeat 1 223 0 699 211 0 0 chr20 44257876 44258047 -27895835 + (TGG)n Simple_repeat Simple_repeat 3 173 0 1224 277 87 39 chr20 44258112 44258767 -27895115 + L2 LINE L2 2605 3297 -16 270 81 0 0 chr20 44258770 44258807 -27895075 + (TGAA)n Simple_repeat Simple_repeat 1 37 0 21 0 0 0 chr20 44258942 44258963 -27894919 + AT_rich Low_complexity Low_complexity 1 21 0 1461 208 57 59 chr20 44259430 44259819 -27894063 + MLT1B LTR MaLR 1 388 -2 633 292 72 8 chr20 44260122 44260372 -27893510 - L2 LINE L2 -3 3310 3045 788 259 65 7 chr20 44260372 44260666 -27893216 - LTR16C LTR ERVL -1 490 180 370 252 7 50 chr20 44260797 44260936 -27892946 - L2 LINE L2 -251 3062 2930 848 110 19 7 chr20 44261037 44261191 -27892691 + (TC)n Simple_repeat Simple_repeat 2 157 0 645 200 45 0 chr20 44261728 44261883 -27891999 - LTR16C LTR ERVL -1 490 329 409 258 52 70 chr20 44261917 44262048 -27891834 - LTR16C LTR ERVL -146 345 218 1940 138 9 44 chr20 44262048 44262366 -27891516 + AluJo SINE Alu 1 307 -5 409 258 52 70 chr20 44262366 44262463 -27891419 - LTR16C LTR ERVL -273 218 121 447 305 100 37 chr20 44263000 44263410 -27890472 - L2 LINE L2 -55 3258 2823 2001 155 0 0 chr20 44264559 44264862 -27889020 + AluJo SINE Alu 5 307 -5 1531 184 69 7 chr20 44265742 44266030 -27887852 + AluJo SINE Alu 7 312 0 452 97 0 0 chr20 44266142 44266214 -27887668 - Alu SINE Alu -3 309 238 1800 112 46 14 chr20 44266467 44266752 -27887130 + L1PA16 LINE L1 5863 6156 -10 1953 143 0 31 chr20 44266752 44267046 -27886836 + AluJo SINE Alu 1 285 -27 234 0 0 0 chr20 44267046 44267072 -27886810 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 213 318 24 35 chr20 44267087 44267172 -27886710 - L2 LINE L2 -5 3267 3184 394 185 11 33 chr20 44267310 44267402 -27886480 + L1MB4 LINE L1 6074 6163 -17 230 163 0 23 chr20 44267402 44267435 -27886447 + (TATG)n Simple_repeat Simple_repeat 2 35 -8 2269 78 11 0 chr20 44267435 44267718 -27886164 - AluSp SINE Alu -27 286 1 230 163 0 23 chr20 44267718 44267727 -27886155 + (TATG)n Simple_repeat Simple_repeat 35 43 0 1220 128 50 5 chr20 44267728 44267946 -27885936 - L1MB3 LINE L1 -3 6180 5953 1406 104 0 6 chr20 44267949 44268132 -27885750 - AluSg/x SINE Alu -10 300 119 440 303 61 8 chr20 44268139 44268271 -27885611 - L2 LINE L2 0 3272 3134 239 213 21 0 chr20 44268382 44268429 -27885453 + MIR SINE MIR 100 147 -61 263 174 0 0 chr20 44268530 44268576 -27885306 - MIR SINE MIR -109 153 108 191 287 188 20 chr20 44268895 44268996 -27884886 + MIR SINE MIR 24 141 -67 1593 170 78 39 chr20 44269062 44269421 -27884461 - MLT1B LTR MaLR -16 374 2 1036 194 19 95 chr20 44269449 44269774 -27884108 + L1ME1 LINE L1 5867 6166 0 329 232 0 12 chr20 44269820 44269902 -27883980 + MIR SINE MIR 170 250 -12 542 271 83 17 chr20 44270254 44270274 -27883608 - MIR SINE MIR -44 218 201 329 215 13 0 chr20 44270274 44270353 -27883529 + MER116 DNA Mariner 1 80 0 542 271 83 17 chr20 44270353 44270513 -27883369 - MIR SINE MIR -61 201 26 253 136 23 0 chr20 44271593 44271637 -27882245 - L2 LINE L2 0 3313 3269 665 264 13 87 chr20 44271658 44271718 -27882164 + MLT1H1 LTR MaLR 3 66 -476 2564 71 0 0 chr20 44271718 44272026 -27881856 + AluY SINE Alu 1 308 -3 665 264 13 87 chr20 44272026 44272239 -27881643 + MLT1H1 LTR MaLR 66 256 -286 634 266 46 0 chr20 44272254 44272427 -27881455 + MLT1H1 LTR MaLR 375 555 0 2531 76 0 0 chr20 44273155 44273456 -27880426 - AluSq SINE Alu -12 301 1 321 220 220 20 chr20 44273463 44273563 -27880319 - MER5B DNA MER1_type -52 126 7 703 216 74 0 chr20 44273664 44273826 -27880056 + MER63B DNA MER1_type 1 174 -262 450 248 177 7 chr20 44273906 44274047 -27879835 + MER5A DNA MER1_type 25 189 0 1638 175 10 23 chr20 44274091 44274531 -27879351 + AluJo SINE Alu 6 441 0 249 301 79 46 chr20 44274546 44274757 -27879125 - L2 LINE L2 -202 3070 2853 560 195 55 16 chr20 44274757 44274885 -27878997 + MER5A DNA MER1_type 2 134 -55 1980 81 4 0 chr20 44274886 44275133 -27878749 - AluSx SINE Alu -4 308 61 715 259 11 26 chr20 44275493 44275682 -27878200 - MIR SINE MIR -14 248 63 312 273 207 8 chr20 44276195 44276316 -27877566 + MIR SINE MIR 117 261 -1 1470 196 23 4 chr20 44276482 44276769 -27877113 + AluJo SINE Alu 17 308 0 787 301 37 0 chr20 44276957 44277203 -27876679 + MIR SINE MIR 8 262 0 316 289 110 37 chr20 44277355 44277492 -27876390 - MIR SINE MIR -21 187 33 202 348 33 0 chr20 44277643 44277735 -27876147 + MIR SINE MIR 167 261 -1 1907 160 0 7 chr20 44277752 44278046 -27875836 - AluJb SINE Alu -20 292 1 342 270 62 62 chr20 44278363 44278589 -27875293 - L2 LINE L2 -221 3092 2867 201 267 8 46 chr20 44279108 44279239 -27874643 + (CCCCG)n Simple_repeat Simple_repeat 3 128 0 677 283 138 21 chr20 44280063 44280388 -27873494 + L2 LINE L2 2951 3313 0 216 286 154 11 chr20 44280393 44280484 -27873398 + L2 LINE L2 3169 3272 0 2310 107 0 0 chr20 44280515 44280806 -27873076 + AluSx SINE Alu 1 291 -21 932 269 5 5 chr20 44280878 44281094 -27872788 - MIR SINE MIR 0 262 47 623 289 11 25 chr20 44281333 44281529 -27872353 - MIR SINE MIR -53 209 16 332 230 266 22 chr20 44282305 44282444 -27871438 + L2 LINE L2 3100 3272 0 202 278 14 14 chr20 44283335 44283407 -27870475 + (TG)n Simple_repeat Simple_repeat 1 72 0 273 250 188 31 chr20 44283848 44283976 -27869906 + MIR SINE MIR 77 224 -38 300 329 0 0 chr20 44284137 44284222 -27869660 - L2 LINE L2 0 3313 3229 446 200 40 10 chr20 44284235 44284335 -27869547 - MER103 DNA DNA -63 103 1 258 223 471 19 chr20 44284443 44284600 -27869282 + MIR SINE MIR 8 235 -27 482 206 135 41 chr20 44284942 44285112 -27868770 + MLT1H LTR MaLR 364 549 0 399 273 133 94 chr20 44286082 44286412 -27867470 - L2 LINE L2 -5 3267 2925 1043 256 119 9 chr20 44286412 44286841 -27867041 + L1ME3 LINE L1 5476 5951 -219 3957 134 57 6 chr20 44287363 44287999 -27865883 - LTR51 LTR ERV1 0 671 4 241 26 26 26 chr20 44288515 44288554 -27865328 + (CAAA)n Simple_repeat Simple_repeat 1 39 0 1555 151 4 0 chr20 44288560 44288792 -27865090 + AluJo SINE Alu 1 233 -79 749 281 45 83 chr20 44288943 44289650 -27864232 - L1MC4a LINE L1 -302 5819 5262 196 299 43 34 chr20 44289675 44289792 -27864090 - MIR SINE MIR -61 147 30 555 323 5 27 chr20 44289865 44290051 -27863831 + MER5A DNA MER1_type 7 188 -1 222 37 0 0 chr20 44290135 44290162 -27863720 + (CCA)n Simple_repeat Simple_repeat 1 27 0 183 344 12 74 chr20 44291474 44291637 -27862245 - MIR SINE MIR -6 256 104 2489 79 3 12 chr20 44291820 44292150 -27861732 - L1PA8A LINE L1 0 6131 5805 353 241 303 0 chr20 44292377 44292522 -27861360 + L1ME3 LINE L1 5973 6161 -1 400 335 26 26 chr20 44292655 44292810 -27861072 + L3 LINE CR1 878 1032 -545 800 278 10 10 chr20 44292912 44293121 -27860761 + MIR SINE MIR 23 231 -31 295 259 49 0 chr20 44293935 44294016 -27859866 + MIR SINE MIR 103 187 -75 * 598 193 133 24 chr20 44294014 44294180 -27859702 - MIR SINE MIR 0 262 79 339 323 135 0 chr20 44294204 44294337 -27859545 + L2 LINE L2 2187 2337 -977 264 225 239 0 chr20 44294351 44294422 -27859460 - MIR SINE MIR -127 135 48 928 219 0 49 chr20 44294506 44294689 -27859193 + FAM SINE Alu 1 174 -1 2275 83 0 65 chr20 44294961 44295285 -27858597 + AluSg SINE Alu 1 303 -7 252 355 56 19 chr20 44295700 44295807 -27858075 - MIR3 SINE MIR -88 120 10 444 321 42 31 chr20 44296205 44296398 -27857484 + MIR SINE MIR 68 262 0 955 193 19 0 chr20 44296447 44296608 -27857274 - FRAM SINE Alu -19 157 1 1746 177 6 10 chr20 44296621 44296932 -27856950 - AluJb SINE Alu -2 310 1 326 298 0 39 chr20 44297077 44297181 -27856701 + C-rich Low_complexity Low_complexity 4 103 0 394 258 17 73 chr20 44298292 44298486 -27855396 + MIR SINE MIR 25 207 -55 313 372 112 18 chr20 44298823 44299207 -27854675 + L2 LINE L2 665 1084 -2230 263 91 0 23 chr20 44299214 44299258 -27854624 + (TTCA)n Simple_repeat Simple_repeat 1 43 0 1939 139 20 27 chr20 44299303 44299598 -27854284 - AluJb SINE Alu -19 293 1 362 273 40 10 chr20 44299599 44299698 -27854184 - L2 LINE L2 -11 3302 3201 417 154 0 31 chr20 44299957 44300022 -27853860 - AluJ/FLAM SINE Alu -248 64 2 207 69 0 0 chr20 44300415 44300444 -27853438 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 2348 202 25 39 chr20 44300447 44300848 -27853034 - MLT1F LTR MaLR -34 508 114 1727 159 0 54 chr20 44300848 44301162 -27852720 - AluJo SINE Alu -15 297 1 2348 202 25 39 chr20 44301162 44301271 -27852611 - MLT1F LTR MaLR -428 114 5 1084 229 25 8 chr20 44301496 44301740 -27852142 - MIR SINE MIR -3 259 12 1980 72 79 7 chr20 44303034 44303313 -27850569 - LTR17 LTR ERV1 0 780 482 1153 86 0 17 chr20 44303308 44303482 -27850400 + LTR17 LTR ERV1 289 459 -321 * 544 43 0 14 chr20 44303496 44303566 -27850316 - LTR17 LTR ERV1 -711 69 1 2143 102 7 3 chr20 44303970 44304286 -27849596 + AluSg SINE Alu 1 317 0 448 278 172 0 chr20 44304424 44304575 -27849307 - MER5A DNA MER1_type -12 177 1 217 268 18 0 chr20 44304635 44304691 -27849191 + GA-rich Low_complexity Low_complexity 1 57 0 195 42 0 0 chr20 44304795 44304819 -27849063 + (TC)n Simple_repeat Simple_repeat 1 24 0 239 306 0 0 chr20 44304831 44304903 -27848979 + LTR16C LTR ERVL 411 482 -9 1032 247 48 54 chr20 44305922 44306314 -27847568 + LTR16C LTR ERVL 97 486 -5 2120 145 0 0 chr20 44306458 44306762 -27847120 - AluSx SINE Alu -2 310 7 330 320 19 29 chr20 44307116 44307219 -27846663 + L2 LINE L2 3121 3222 -50 275 313 12 0 chr20 44307233 44307313 -27846569 + L2 LINE L2 2564 2644 -670 1075 269 133 6 chr20 44307669 44308140 -27845742 - L2 LINE L2 -267 3046 2537 381 308 150 40 chr20 44308452 44308725 -27845157 + L2 LINE L2 2848 3150 -122 535 255 21 130 chr20 44309073 44309187 -27844695 + MIR SINE MIR 37 113 -149 2414 112 0 0 chr20 44309187 44309499 -27844383 - AluSx SINE Alu 0 312 1 535 255 21 130 chr20 44309499 44309623 -27844259 + MIR SINE MIR 113 249 -13 327 280 93 0 chr20 44310433 44310540 -27843342 - MER117 DNA MER1_type -40 157 41 195 259 0 0 chr20 44310583 44310641 -27843241 + (ATGGTG)n Simple_repeat Simple_repeat 5 62 0 437 261 0 9 chr20 44310912 44311023 -27842859 - MIR SINE MIR -55 153 44 270 251 64 96 chr20 44311685 44311720 -27842162 - MIR SINE MIR -38 224 189 2391 104 0 0 chr20 44311720 44312018 -27841864 - AluSg SINE Alu -12 298 1 270 251 64 96 chr20 44312018 44312169 -27841713 - MIR SINE MIR -73 189 44 * 617 240 91 0 chr20 44312128 44312282 -27841600 + MIR SINE MIR 5 172 -90 2118 115 18 0 chr20 44312698 44312977 -27840905 + AluSg SINE Alu 1 284 -26 779 57 9 0 chr20 44312978 44313083 -27840799 + (AATAG)n Simple_repeat Simple_repeat 4 109 0 317 260 98 8 chr20 44313258 44313381 -27840501 + L2 LINE L2 3138 3271 -1 301 293 21 29 chr20 44313505 44313645 -27840237 + L1MC4a LINE L1 5829 5967 -1841 2021 96 8 4 chr20 44313706 44313995 -27839887 + AluSq SINE Alu 21 310 0 195 189 0 0 chr20 44314546 44314599 -27839283 + A-rich Low_complexity Low_complexity 1 53 0 2164 101 0 80 chr20 44314761 44315097 -27838785 + AluSx SINE Alu 1 309 -3 859 235 78 4 chr20 44315812 44316042 -27837840 - MIR SINE MIR -12 250 4 236 325 9 9 chr20 44316166 44316280 -27837602 + MIR SINE MIR 29 142 -120 2306 120 0 3 chr20 44316455 44316756 -27837126 - AluSx SINE Alu -12 300 1 218 257 43 0 chr20 44317111 44317181 -27836701 + MIR SINE MIR 189 261 -1 2243 97 10 0 chr20 44317186 44317476 -27836406 - AluSx SINE Alu -19 293 1 1328 150 9 19 chr20 44317500 44317713 -27836169 + AluJb SINE Alu 84 294 -18 252 330 70 10 chr20 44318117 44318217 -27835665 - L2 LINE L2 -168 3104 2999 425 271 53 32 chr20 44318258 44318446 -27835436 - MIR SINE MIR -50 212 21 2269 59 37 4 chr20 44318448 44318768 -27835114 + AluY SINE Alu 1 329 0 385 175 0 0 chr20 44319585 44319648 -27834234 - L2 LINE L2 0 3272 3210 317 320 10 0 chr20 44319686 44319789 -27834093 - MIR SINE MIR 0 262 159 407 194 51 20 chr20 44320196 44320294 -27833588 - MIR SINE MIR -106 156 56 26 30 0 0 chr20 44321066 44321099 -27832783 + AT_rich Low_complexity Low_complexity 1 33 0 2174 93 14 0 chr20 44321099 44321377 -27832505 + AluSq SINE Alu 1 282 -31 1786 128 40 0 chr20 44321510 44321759 -27832123 - AluSx SINE Alu -53 259 1 638 276 9 46 chr20 44322161 44322378 -27831504 + MIR SINE MIR 47 255 -7 876 222 6 2 chr20 44322616 44322816 -27831066 - MLT1B LTR MaLR -3 382 174 239 150 17 0 chr20 44322818 44322878 -27831004 + GA-rich Low_complexity Low_complexity 1 61 0 679 172 96 6 chr20 44322891 44323048 -27830834 - MLT1B LTR MaLR -219 171 1 248 230 27 27 chr20 44323285 44323359 -27830523 + MIR SINE MIR 175 248 -14 354 311 25 25 chr20 44324034 44324153 -27829729 - L3 LINE CR1 -30 1547 1429 315 0 0 0 chr20 44325255 44325290 -27828592 + (TG)n Simple_repeat Simple_repeat 1 35 0 437 304 84 5 chr20 44325984 44326175 -27827707 - MIR SINE MIR 0 262 57 336 248 38 19 chr20 44326441 44326546 -27827336 + MIR SINE MIR 40 146 -62 278 24 73 0 chr20 44327228 44327269 -27826613 + T-rich Low_complexity Low_complexity 2 45 0 258 32 0 0 chr20 44329063 44329094 -27824788 + (CCG)n Simple_repeat Simple_repeat 2 32 0 315 258 103 62 chr20 44334372 44334566 -27819316 - L2 LINE L2 -4 3309 3108 183 80 0 0 chr20 44335133 44335158 -27818724 + (TG)n Simple_repeat Simple_repeat 1 25 0 1846 158 3 17 chr20 44337064 44337355 -27816527 - AluJb SINE Alu -25 287 1 887 198 35 70 chr20 44337409 44337666 -27816216 - MER96B DNA MER1_type? -169 248 1 332 274 0 69 chr20 44338072 44338174 -27815708 - L2 LINE L2 -4 3309 3215 580 288 116 9 chr20 44338384 44338599 -27815283 + LTR16C LTR ERVL 252 489 -2 285 151 0 0 chr20 44338753 44338806 -27815076 + CT-rich Low_complexity Low_complexity 3 55 0 219 69 0 0 chr20 44338875 44338904 -27814978 + (TGGA)n Simple_repeat Simple_repeat 1 29 0 201 274 20 39 chr20 44338929 44339031 -27814851 + (TGAA)n Simple_repeat Simple_repeat 1 100 0 313 327 18 9 chr20 44339070 44339183 -27814699 + L2 LINE L2 3157 3270 -2 215 327 41 83 chr20 44339193 44339320 -27814562 - L2 LINE L2 -1079 2235 2123 2368 99 0 3 chr20 44339320 44339624 -27814258 + AluSx SINE Alu 1 303 -9 215 327 41 83 chr20 44339624 44339762 -27814120 - L2 LINE L2 -1191 2123 1981 2664 131 26 12 chr20 44339829 44340249 -27813633 + MSTB LTR MaLR 1 426 0 496 261 75 32 chr20 44340476 44340664 -27813218 - LTR16C LTR ERVL -9 482 287 2117 104 0 38 chr20 44341084 44341226 -27812656 + AluSg SINE Alu 3 149 -262 2185 93 39 0 chr20 44341226 44341506 -27812376 + AluY SINE Alu 5 295 -16 2117 104 0 38 chr20 44341506 44341783 -27812099 + AluSg SINE Alu 149 411 0 228 163 0 0 chr20 44341805 44341848 -27812034 + GA-rich Low_complexity Low_complexity 1 43 0 349 266 58 27 chr20 44341888 44342076 -27811806 + L1M4 LINE L1 2133 2326 -3820 2208 102 3 0 chr20 44342078 44342388 -27811494 + AluSp SINE Alu 1 311 0 1768 181 3 17 chr20 44342523 44342816 -27811066 - AluJo SINE Alu -23 289 1 2056 138 26 0 chr20 44342920 44343224 -27810658 - AluSx SINE Alu 0 312 1 4790 259 109 47 chr20 44343242 44343383 -27810499 - HAL1 LINE L1 0 2507 2376 2308 95 7 0 chr20 44343383 44343677 -27810205 - AluSp SINE Alu -16 297 2 4790 259 109 47 chr20 44343677 44343730 -27810152 - HAL1 LINE L1 -131 2376 2328 1898 164 0 4 chr20 44343730 44344011 -27809871 + AluSx SINE Alu 1 280 -32 4790 259 109 47 chr20 44344011 44344308 -27809574 - HAL1 LINE L1 -179 2328 2051 1487 141 82 59 chr20 44344308 44344500 -27809382 - AluJo SINE Alu 0 312 109 1819 174 40 0 chr20 44344500 44344798 -27809084 - AluJo SINE Alu -2 310 1 1487 141 82 59 chr20 44344798 44344910 -27808972 - AluJo SINE Alu -203 109 1 4790 259 109 47 chr20 44344910 44346708 -27807174 - HAL1 LINE L1 -456 2051 74 644 203 74 88 chr20 44347492 44347622 -27806260 + MLT1C LTR MaLR 65 192 -275 1882 107 110 11 chr20 44347622 44347903 -27805979 + AluSg1 SINE Alu 1 309 0 644 203 74 88 chr20 44347903 44347989 -27805893 + MLT1C LTR MaLR 192 278 -189 1387 211 84 88 chr20 44348017 44348194 -27805688 - MLT2B1 LTR ERVL 0 520 344 1861 135 146 13 chr20 44348194 44348572 -27805310 - MSTA LTR MaLR 0 428 1 1387 211 84 88 chr20 44348572 44348688 -27805194 - MLT2B1 LTR ERVL -176 344 229 2438 97 10 0 chr20 44348688 44348998 -27804884 + AluSp SINE Alu 1 313 0 1387 211 84 88 chr20 44348998 44349225 -27804657 - MLT2B1 LTR ERVL -291 229 1 772 209 16 22 chr20 44349233 44349415 -27804467 + MLT1C LTR MaLR 287 467 0 2153 118 7 3 chr20 44349431 44349720 -27804162 - AluSx SINE Alu -22 290 1 826 150 9 112 chr20 44349783 44349844 -27804038 - MER3 DNA MER1_type 0 209 143 2274 131 0 0 chr20 44349844 44350157 -27803725 + AluSq SINE Alu 1 313 0 826 150 9 112 chr20 44350157 44350328 -27803554 - MER3 DNA MER1_type -66 143 1 265 208 0 0 chr20 44350589 44350642 -27803240 - MLT1I LTR MaLR -271 138 86 403 163 279 0 chr20 44350788 44350874 -27803008 + AluJb SINE Alu 82 191 -121 * 607 118 0 0 chr20 44350867 44350952 -27802930 - AluJ/FLAM SINE Alu -221 91 7 41 0 0 0 chr20 44350979 44351020 -27802862 + AT_rich Low_complexity Low_complexity 1 41 0 2516 82 0 0 chr20 44351029 44351333 -27802549 - AluSq SINE Alu -9 304 1 2141 129 0 3 chr20 44351544 44351855 -27802027 + AluSx SINE Alu 1 310 -2 1238 127 0 0 chr20 44352020 44352185 -27801697 + AluJb SINE Alu 85 249 -63 1606 216 145 22 chr20 44353720 44354450 -27799432 - L2 LINE L2 -3 3310 2492 378 280 110 22 chr20 44354961 44355143 -27798739 + MIR3 SINE MIR 11 208 0 200 189 57 38 chr20 44355162 44355215 -27798667 + L2 LINE L2 3215 3268 -4 2092 114 19 10 chr20 44355270 44355577 -27798305 - AluSx SINE Alu -2 310 1 249 167 0 74 chr20 44355617 44355671 -27798211 + L2 LINE L2 3259 3308 -5 273 276 95 9 chr20 44355834 44355939 -27797943 + MIR SINE MIR 99 212 -50 405 222 183 26 chr20 44356361 44356514 -27797368 - MER5A DNA MER1_type -6 183 7 265 316 13 0 chr20 44356589 44356665 -27797217 + L3 LINE CR1 1498 1574 -3 307 119 60 0 chr20 44357569 44357636 -27796246 - L1MB2 LINE L1 0 6171 6101 364 156 13 39 chr20 44357892 44357969 -27795913 + L1ME1 LINE L1 6003 6077 -89 768 190 15 36 chr20 44358003 44358198 -27795684 + L1MD2 LINE L1 5806 5996 -363 243 164 213 0 chr20 44358198 44358259 -27795623 - L1M4 LINE L1 -490 5688 5615 * 1546 249 82 26 chr20 44358257 44358958 -27794924 - L1MDa LINE L1 -3838 2702 1967 2111 94 4 4 chr20 44359083 44359359 -27794523 + AluY SINE Alu 1 276 -35 1402 85 0 6 chr20 44359359 44359535 -27794347 - AluY SINE Alu -136 175 1 517 253 59 12 chr20 44360051 44360221 -27793661 - L1ME3A LINE L1 0 6170 5993 2090 116 3 0 chr20 44361269 44361571 -27792311 + AluSq SINE Alu 1 303 -10 1535 196 3 7 chr20 44361577 44361873 -27792009 - AluJo SINE Alu -17 295 1 2335 71 0 0 chr20 44363011 44363307 -27790575 + AluSx SINE Alu 1 296 -16 1388 161 77 28 chr20 44364532 44364817 -27789065 + AluJo SINE Alu 1 299 -13 499 238 172 20 chr20 44365271 44365422 -27788460 - MIR SINE MIR -87 175 2 361 195 12 24 chr20 44365492 44365574 -27788308 - AluJo SINE Alu -1 301 221 1293 123 9 32 chr20 44365647 44365867 -27788015 - AluJo SINE Alu -97 215 1 954 111 8 184 chr20 44366175 44366409 -27787473 + 7SK RNA RNA 1 193 0 1810 244 79 79 chr20 44366637 44367220 -27786662 - MLT1G LTR MaLR -8 582 5 362 298 30 38 chr20 44368239 44368370 -27785512 + MIR SINE MIR 21 150 -112 388 293 177 9 chr20 44368832 44369047 -27784835 - L3 LINE CR1 -7 1570 1320 1691 161 3 10 chr20 44369320 44369619 -27784263 - AluJb SINE Alu -15 297 1 191 261 0 46 chr20 44371162 44371227 -27782655 + L2 LINE L2 3202 3263 -9 368 218 50 20 chr20 44371717 44371818 -27782064 + L1ME1 LINE L1 6010 6113 -53 22 56 0 0 chr20 44371836 44371872 -27782010 + AT_rich Low_complexity Low_complexity 1 36 0 274 239 193 0 chr20 44372312 44372421 -27781461 - L1ME4a LINE L1 -100 6021 5892 285 263 96 56 chr20 44372550 44372748 -27781134 - L2 LINE L2 -344 2970 2765 210 328 141 16 chr20 44372818 44372946 -27780936 + MIR SINE MIR 100 243 -19 2462 205 72 4 chr20 44372958 44373484 -27780398 - MER68 LTR ERV1 0 562 1 287 269 97 35 chr20 44373484 44373629 -27780253 - L2 LINE L2 -538 2776 2623 411 240 161 21 chr20 44373718 44373910 -27779972 + L2 LINE L2 2841 3059 -213 225 227 41 41 chr20 44375128 44375225 -27778657 - L1ME4a LINE L1 -224 5897 5801 1000 168 0 12 chr20 44376940 44377107 -27776775 + FAM SINE Alu 1 165 -10 215 388 78 0 chr20 44377178 44377307 -27776575 - MIR3 SINE MIR -54 154 16 4483 158 41 50 chr20 44377952 44377990 -27775892 - L1MB2 LINE L1 -12 6159 6122 2123 104 0 3 chr20 44377990 44378289 -27775593 - AluY SINE Alu -13 298 1 4483 158 41 50 chr20 44378289 44379414 -27774468 - L1MB2 LINE L1 -49 6122 5003 231 261 92 76 chr20 44379570 44379619 -27774263 + HAL1b LINE L1 312 359 -989 2050 119 7 0 chr20 44379619 44379912 -27773970 + AluSx SINE Alu 1 295 -17 231 261 92 76 chr20 44379912 44379981 -27773901 + HAL1b LINE L1 359 432 -916 411 321 84 77 chr20 44380016 44380138 -27773744 + L1M4 LINE L1 3191 3311 -2835 1387 190 78 4 chr20 44380138 44380407 -27773475 + AluJo SINE Alu 1 289 -23 411 321 84 77 chr20 44380407 44380875 -27773007 + L1M4 LINE L1 3311 3788 -2358 2213 99 0 0 chr20 44380875 44381178 -27772704 + AluSc SINE Alu 1 303 -6 411 321 84 77 chr20 44381178 44381194 -27772688 + L1M4 LINE L1 3788 3802 -2344 276 142 85 108 chr20 44381194 44381328 -27772554 - MLT1J2 LTR MaLR -1 449 313 328 348 17 0 chr20 44381383 44381501 -27772381 - MLT1I LTR MaLR -203 206 87 300 267 57 0 chr20 44381501 44381557 -27772325 - L1MDa LINE L1 -4122 2418 2367 321 26 0 0 chr20 44381557 44381595 -27772287 + (TG)n Simple_repeat Simple_repeat 1 38 0 300 267 57 0 chr20 44381595 44381643 -27772239 - L1MDa LINE L1 -4173 2367 2308 399 278 73 37 chr20 44381665 44381856 -27772026 - L1MDa LINE L1 -4363 2358 2161 1915 132 0 41 chr20 44381866 44382001 -27771881 + AluJo SINE Alu 1 140 -172 2378 88 0 0 chr20 44382001 44382309 -27771573 + AluSc SINE Alu 2 309 0 1915 132 0 41 chr20 44382309 44382491 -27771391 + AluJo SINE Alu 140 305 -7 2263 80 0 16 chr20 44382795 44383108 -27770774 - AluSc SINE Alu -1 308 1 1941 117 3 7 chr20 44383879 44384162 -27769720 + AluSq SINE Alu 1 282 -31 558 288 63 115 chr20 44384929 44385433 -27768449 + L1MC4a LINE L1 6114 6591 -1217 1692 117 0 4 chr20 44385491 44385766 -27768116 + AluSx SINE Alu 53 326 0 363 119 30 45 chr20 44385779 44385846 -27768036 + L1MC4 LINE L1 6944 7009 -1033 593 185 104 7 chr20 44487221 44487356 -27666526 + MER58C DNA MER1_type 68 215 0 21 0 0 0 chr20 44487736 44487757 -27666125 + AT_rich Low_complexity Low_complexity 1 21 0 1612 228 18 23 chr20 44488643 44489078 -27664804 + L1M4 LINE L1 3867 4299 -1847 891 196 158 26 chr20 44489089 44489354 -27664528 + MLT1E1 LTR MaLR 2 301 -353 253 284 78 17 chr20 44489774 44489890 -27663992 + L3b LINE CR1 1290 1412 -171 238 305 117 31 chr20 44490525 44490653 -27663229 + MIR SINE MIR 101 239 -23 4845 172 26 26 chr20 44491408 44492355 -27661527 - L1MA10 LINE L1 0 6334 5388 222 250 86 107 chr20 44492727 44492901 -27660981 - MIR SINE MIR -67 141 5 251 286 156 0 chr20 44493122 44493353 -27660529 - L1MC4 LINE L1 -194 7848 7582 25 0 0 0 chr20 44493459 44493484 -27660398 + AT_rich Low_complexity Low_complexity 1 25 0 595 80 0 0 chr20 44493500 44493575 -27660307 - AluJb SINE Alu -199 113 39 309 118 0 0 chr20 44498080 44498131 -27655751 + (CA)n Simple_repeat Simple_repeat 2 52 0 200 59 29 0 chr20 44498428 44498462 -27655420 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 320 133 0 0 chr20 44498801 44498846 -27655036 + L2 LINE L2 3219 3263 -9 258 302 62 62 chr20 44500399 44500528 -27653354 - MER5A DNA MER1_type -7 182 54 628 257 82 20 chr20 44500899 44501144 -27652738 + Charlie8 DNA MER1_type 15 274 -2143 208 154 26 0 chr20 44501582 44501621 -27652261 + (CAGCC)n Simple_repeat Simple_repeat 1 40 0 475 257 7 81 chr20 44502082 44502230 -27651652 - MER91A DNA MER1_type -58 138 2 1599 152 67 0 chr20 44502510 44502780 -27651102 + AluJb SINE Alu 2 289 -23 2249 105 0 0 chr20 44503193 44503499 -27650383 - AluSq SINE Alu -7 306 1 581 278 51 6 chr20 44503524 44503700 -27650182 - MIR SINE MIR 0 262 79 701 257 86 0 chr20 44503715 44503902 -27649980 + MIR SINE MIR 36 238 -24 372 264 197 24 chr20 44504928 44505124 -27648758 + MIR SINE MIR 30 252 -10 2318 65 3 0 chr20 44505165 44505456 -27648426 - AluSc SINE Alu -17 292 1 265 252 157 26 chr20 44505474 44505589 -27648293 - MIR SINE MIR -1 261 132 448 239 49 48 chr20 44506830 44507096 -27646786 + L2 LINE L2 2966 3311 -2 180 0 0 0 chr20 44507101 44507121 -27646761 + (TTA)n Simple_repeat Simple_repeat 1 20 0 226 358 83 0 chr20 44507136 44507245 -27646637 - MIR SINE MIR -18 244 127 407 272 152 62 chr20 44507311 44507620 -27646262 + L2 LINE L2 2168 2504 -810 721 184 141 0 chr20 44507842 44507998 -27645884 + MER45A DNA AcHobo 1 178 0 2090 139 0 0 chr20 44508109 44508419 -27645463 - AluSx SINE Alu -2 310 1 733 242 82 70 chr20 44509120 44509185 -27644697 - MIR SINE MIR -9 253 190 2012 123 13 3 chr20 44509185 44509487 -27644395 + AluSx SINE Alu 1 305 -7 733 242 82 70 chr20 44509487 44509665 -27644217 - MIR SINE MIR -72 190 7 601 178 0 11 chr20 44510320 44510494 -27643388 + (CA)n Simple_repeat Simple_repeat 2 173 0 693 197 4 8 chr20 44510529 44511033 -27642849 + (CA)n Simple_repeat Simple_repeat 1 501 0 204 184 0 0 chr20 44511112 44511161 -27642721 + (CA)n Simple_repeat Simple_repeat 2 50 0 210 150 0 0 chr20 44511693 44511733 -27642149 + (CA)n Simple_repeat Simple_repeat 1 40 0 579 229 78 0 chr20 44511805 44511958 -27641924 - MIR SINE MIR -29 233 69 1008 233 59 81 chr20 44512367 44512775 -27641107 - MLT1C LTR MaLR 0 467 69 2849 71 100 5 chr20 44512777 44513186 -27640696 - LTR7 LTR ERV1 -2 448 1 2233 97 39 39 chr20 44513186 44513576 -27640306 - HERVH LTR ERV1 0 7713 7324 1343 105 53 0 chr20 44513576 44513785 -27640097 - HERVH LTR ERV1 -1894 5819 5600 4037 122 64 0 chr20 44513786 44514408 -27639474 - HERVH LTR ERV1 -2564 5149 4488 15950 148 23 27 chr20 44514410 44518767 -27635115 - HERVH LTR ERV1 -2882 3647 1 2722 78 92 5 chr20 44518769 44519181 -27634701 - LTR7 LTR ERV1 -2 448 1 269 128 39 103 chr20 44519181 44519259 -27634623 - MLT1C LTR MaLR -394 73 1 243 232 0 0 chr20 44519272 44519328 -27634554 + MIR SINE MIR 172 227 -35 1795 160 0 19 chr20 44519368 44519675 -27634207 + AluJb SINE Alu 1 301 -11 600 260 53 6 chr20 44519708 44519877 -27634005 - MIR SINE MIR -28 234 58 414 323 0 0 chr20 44520420 44520547 -27633335 + (CTCA)n Simple_repeat Simple_repeat 1 127 0 423 165 0 0 chr20 44520556 44520641 -27633241 + (TCCA)n Simple_repeat Simple_repeat 3 87 0 243 125 0 0 chr20 44520717 44520757 -27633125 + (TCCA)n Simple_repeat Simple_repeat 1 40 0 254 191 0 0 chr20 44521851 44521898 -27631984 - MIR SINE MIR -108 154 108 322 296 152 0 chr20 44522526 44522658 -27631224 - MIR SINE MIR -79 183 32 390 300 54 38 chr20 44523047 44523360 -27630522 - L1MC4a LINE L1 -114 6007 5688 838 50 22 22 chr20 44523783 44523922 -27629960 + (TCTA)n Simple_repeat Simple_repeat 4 142 0 225 108 27 0 chr20 44523922 44523959 -27629923 - MLT1D LTR MaLR -7 498 461 183 42 0 0 chr20 44523966 44523990 -27629892 + (TC)n Simple_repeat Simple_repeat 1 24 0 2079 165 80 49 chr20 44523993 44524483 -27629399 - MLT1D LTR MaLR 0 505 1 192 152 0 0 chr20 44524509 44524542 -27629340 + (TCTA)n Simple_repeat Simple_repeat 4 36 0 2453 91 0 0 chr20 44524779 44525075 -27628807 - AluSg SINE Alu -14 296 1 22 35 0 0 chr20 44525110 44525139 -27628743 + AT_rich Low_complexity Low_complexity 1 29 0 251 267 47 23 chr20 44525529 44525615 -27628267 + L2 LINE L2 3225 3312 -1 703 268 102 54 chr20 44526190 44526265 -27627617 - L1MC4a LINE L1 -298 5823 5753 1433 166 116 22 chr20 44526265 44526542 -27627340 - AluJo SINE Alu -9 303 1 703 268 102 54 chr20 44526542 44526979 -27626903 - L1MC4a LINE L1 -368 5753 5373 819 241 14 18 chr20 44527277 44527497 -27626385 + MIR SINE MIR 42 260 -2 221 307 148 0 chr20 44527597 44527685 -27626197 + MIR SINE MIR 45 145 -63 400 289 74 36 chr20 44528103 44528507 -27625375 - L1MC4a LINE L1 -753 5393 5111 182 282 141 0 chr20 44528961 44529032 -27624850 - MIR SINE MIR -171 91 11 1630 205 74 44 chr20 44529075 44529556 -27624326 - MLT1D LTR MaLR -4 485 4 957 179 0 0 chr20 44529651 44529819 -27624063 - MER5A DNA MER1_type -21 168 1 612 301 126 23 chr20 44529826 44530215 -27623667 - L2 LINE L2 -1 3271 2843 1602 188 33 9 chr20 44530784 44531120 -27622762 - MER4D LTR ERV1 -11 892 549 1636 149 0 55 chr20 44531156 44531261 -27622621 - MER49 LTR ERV1 -630 293 184 2284 111 20 0 chr20 44531261 44531567 -27622315 - AluSx SINE Alu 0 312 1 1636 149 0 55 chr20 44531567 44531769 -27622113 - MER49 LTR ERV1 -739 184 3 1910 155 0 56 chr20 44531795 44531966 -27621916 - AluJo SINE Alu -8 304 158 2288 73 21 10 chr20 44531966 44532255 -27621627 - AluY SINE Alu -19 292 1 1910 155 0 56 chr20 44532255 44532405 -27621477 - AluJo SINE Alu -154 158 1 1245 166 46 14 chr20 44532451 44532734 -27621148 - Charlie5 DNA MER1_type -85 2527 2236 2053 146 13 0 chr20 44532773 44533116 -27620766 + AluSx SINE Alu 1 347 0 385 167 107 36 chr20 44533133 44533217 -27620665 - Charlie5 DNA MER1_type -2521 91 2 444 245 37 75 chr20 44533365 44533553 -27620329 - Charlie8 DNA MER1_type -2174 243 63 354 319 108 25 chr20 44533804 44533961 -27619921 - MER5B DNA MER1_type -6 172 3 235 198 37 123 chr20 44534464 44534545 -27619337 + MER91B DNA MER1_type 2 75 -115 195 42 0 0 chr20 44534727 44534751 -27619131 + (TTTC)n Simple_repeat Simple_repeat 2 25 0 688 232 122 0 chr20 44536927 44537108 -27616774 + MIR SINE MIR 5 207 -55 886 196 43 14 chr20 44537108 44537317 -27616565 + MER20 DNA MER1_type 1 215 -4 567 134 0 0 chr20 44537317 44537426 -27616456 - AluSg/x SINE Alu 0 310 202 300 373 0 0 chr20 44537818 44537936 -27615946 - MIR3 SINE MIR -49 159 42 272 160 20 0 chr20 44538265 44538315 -27615567 + L2 LINE L2 3263 3313 0 368 319 21 21 chr20 44538338 44538482 -27615400 - MIR SINE MIR -102 160 17 2124 101 7 36 chr20 44538482 44538788 -27615094 - AluSg SINE Alu -13 297 1 1178 262 43 18 chr20 44538831 44539326 -27614556 - MLT1G LTR MaLR -22 549 4 281 233 0 0 chr20 44539344 44539404 -27614478 - L2 LINE L2 -32 3281 3222 241 256 247 27 chr20 44539715 44539934 -27613948 - L2 LINE L2 -667 2647 2381 383 328 81 34 chr20 44540006 44540186 -27613696 + MIR SINE MIR 7 202 -60 1382 196 87 0 chr20 44540186 44540461 -27613421 + AluJo SINE Alu 1 299 -13 383 328 81 34 chr20 44540461 44540515 -27613367 + MIR SINE MIR 202 252 -10 225 274 32 0 chr20 44540543 44540605 -27613277 + L1ME3A LINE L1 6107 6170 0 703 221 27 0 chr20 44541304 44541453 -27612429 - MER45A DNA AcHobo -24 154 2 321 205 184 47 chr20 44541648 44541797 -27612085 + L1ME LINE L1 5605 5776 -345 1936 159 3 3 chr20 44542153 44542476 -27611406 + AluJb SINE Alu 1 312 0 26 0 0 0 chr20 44542480 44542506 -27611376 + AT_rich Low_complexity Low_complexity 1 26 0 431 288 14 14 chr20 44544034 44544173 -27609709 + L2 LINE L2 2591 2729 -585 497 108 12 24 chr20 44544182 44544265 -27609617 - L2 LINE L2 -6 3307 3226 209 226 0 0 chr20 44544306 44544359 -27609523 + L2 LINE L2 2727 2779 -535 1164 237 101 30 chr20 44544372 44544880 -27609002 - MLT1G3 LTR MaLR -8 559 1 1248 302 30 4 chr20 44544900 44545360 -27608522 + L2 LINE L2 2805 3276 -37 2221 137 0 6 chr20 44545786 44546100 -27607782 - AluSx SINE Alu 0 312 1 514 274 19 23 chr20 44546150 44546365 -27607517 - MER113 DNA MER1_type? -307 214 1 428 294 7 20 chr20 44546706 44546859 -27607023 + MER5A DNA MER1_type 1 151 -38 434 174 17 11 chr20 44547697 44547875 -27606007 + (TG)n Simple_repeat Simple_repeat 1 179 0 548 154 23 0 chr20 44547913 44548088 -27605794 + (TG)n Simple_repeat Simple_repeat 2 180 0 1362 190 113 72 chr20 44548254 44548654 -27605228 - MER66A LTR ERV1 0 478 63 2528 51 0 0 chr20 44548691 44548985 -27604897 - AluY SINE Alu -17 294 1 595 283 17 6 chr20 44549081 44549261 -27604621 + MIR SINE MIR 4 185 -77 191 167 17 150 chr20 44550146 44550206 -27603676 - L2 LINE L2 0 3272 3221 213 121 0 0 chr20 44550397 44550430 -27603452 + (TCCC)n Simple_repeat Simple_repeat 2 34 0 1963 173 0 3 chr20 44550433 44550902 -27602980 - AluJo SINE Alu 0 468 1 238 213 25 12 chr20 44551140 44551220 -27602662 - L1ME3 LINE L1 -123 6039 5959 1974 151 24 0 chr20 44551414 44551712 -27602170 + AluJo SINE Alu 4 308 -4 1948 103 157 16 chr20 44551718 44552037 -27601845 - THE1B LTR MaLR 0 364 1 318 265 78 10 chr20 44552214 44552316 -27601566 - L1MD3 LINE L1 -22 7973 7865 2165 126 7 0 chr20 44552329 44552645 -27601237 - AluSx SINE Alu 0 318 1 2529 58 3 0 chr20 44552649 44552942 -27600940 - AluY SINE Alu -17 294 1 1705 153 10 49 chr20 44553075 44553222 -27600660 + AluJo SINE Alu 1 133 -179 2297 118 0 0 chr20 44553222 44553518 -27600364 + AluSx SINE Alu 1 296 -16 1705 153 10 49 chr20 44553518 44553658 -27600224 + AluJo SINE Alu 133 277 -35 612 274 158 14 chr20 44553808 44554023 -27599859 - MIR SINE MIR -16 246 1 262 292 71 67 chr20 44554368 44554459 -27599423 - MIR SINE MIR -14 248 159 1992 153 0 0 chr20 44554459 44554753 -27599129 + AluJb SINE Alu 9 302 -10 262 292 71 67 chr20 44554753 44554901 -27598981 - MIR SINE MIR -103 159 8 2538 85 0 0 chr20 44555254 44555561 -27598321 - AluSc SINE Alu -2 307 1 280 226 0 12 chr20 44555596 44555680 -27598202 - L1ME4a LINE L1 0 6121 6039 1895 144 4 0 chr20 44555767 44556045 -27597837 + AluJb SINE Alu 5 283 -29 249 225 180 15 chr20 44556171 44556305 -27597577 - MLT1I LTR MaLR 0 536 289 538 268 118 35 chr20 44556326 44556580 -27597302 - MLT1H LTR MaLR -245 304 30 370 250 27 76 chr20 44556608 44556632 -27597250 - L1ME4a LINE L1 -278 5843 5819 1982 168 0 3 chr20 44556632 44556942 -27596940 - AluJb SINE Alu -1 311 3 370 250 27 76 chr20 44556942 44557208 -27596674 - L1ME4a LINE L1 -302 5819 5483 200 31 62 0 chr20 44557213 44557245 -27596637 + (GTTTG)n Simple_repeat Simple_repeat 1 34 0 2299 112 0 10 chr20 44557526 44557830 -27596052 - AluSq SINE Alu -12 301 1 281 298 11 11 chr20 44558259 44558353 -27595529 + MIR SINE MIR 8 101 -161 234 62 0 0 chr20 44558354 44558386 -27595496 + (TTG)n Simple_repeat Simple_repeat 2 33 0 2269 73 7 21 chr20 44558409 44558729 -27595153 + AluY SINE Alu 1 316 0 535 72 0 0 chr20 44558742 44558811 -27595071 - FLAM SINE Alu -18 125 57 303 296 88 19 chr20 44558862 44559021 -27594861 + MIR SINE MIR 93 262 0 457 228 29 31 chr20 44559415 44559559 -27594323 - MIR SINE MIR -21 241 98 1956 164 0 16 chr20 44560470 44560903 -27592979 - AluJo SINE Alu 0 428 1 546 355 70 10 chr20 44561026 44561443 -27592439 + L2 LINE L2 2829 3270 -2 285 169 0 0 chr20 44561447 44561506 -27592376 + GA-rich Low_complexity Low_complexity 4 62 0 207 0 0 0 chr20 44562261 44562284 -27591598 + (TTCA)n Simple_repeat Simple_repeat 1 23 0 408 269 31 38 chr20 44562441 44562601 -27591281 + MER103 DNA DNA 8 166 0 201 350 0 50 chr20 44562796 44562896 -27590986 + MIR SINE MIR 108 202 -60 380 130 14 0 chr20 44562958 44563027 -27590855 + CT-rich Low_complexity Low_complexity 1 70 0 303 85 0 0 chr20 44563088 44563135 -27590747 + (TCCA)n Simple_repeat Simple_repeat 2 48 0 380 213 103 98 chr20 44563151 44563240 -27590642 + MIR SINE MIR 65 152 -110 2202 133 0 16 chr20 44563240 44563557 -27590325 + AluSx SINE Alu 1 312 0 380 213 103 98 chr20 44563557 44563641 -27590241 + MIR SINE MIR 152 239 -23 500 245 92 38 chr20 44564593 44564777 -27589105 + L1MCc LINE L1 834 1027 -5396 502 195 8 8 chr20 44564923 44565051 -27588831 + (CCCA)n Simple_repeat Simple_repeat 1 128 0 476 240 0 6 chr20 44565124 44565299 -27588583 + (TCCA)n Simple_repeat Simple_repeat 1 174 0 244 289 27 117 chr20 44565376 44565632 -27588250 + L2 LINE L2 2827 3059 -213 315 296 53 83 chr20 44567699 44567748 -27586134 - L2 LINE L2 0 3272 3223 2140 116 0 7 chr20 44567748 44568074 -27585808 - AluSx SINE Alu 0 324 1 315 296 53 83 chr20 44568074 44568192 -27585690 - L2 LINE L2 -49 3223 3109 195 220 95 38 chr20 44568268 44568380 -27585502 - L2 LINE L2 -333 2980 2867 312 336 42 0 chr20 44568465 44568584 -27585298 - MIR3 SINE MIR -37 171 48 478 189 322 7 chr20 44569534 44569677 -27584205 - MER5A DNA MER1_type -1 188 1 1059 263 69 26 chr20 44569678 44570100 -27583782 - LTR16A1 LTR ERVL -17 440 1 1598 251 64 21 chr20 44571462 44571933 -27581949 - LTR16C LTR ERVL 0 491 1 687 201 0 0 chr20 44571966 44572145 -27581737 + (ATG)n Simple_repeat Simple_repeat 1 179 0 747 181 0 0 chr20 44572182 44572337 -27581545 + (ATG)n Simple_repeat Simple_repeat 1 155 0 521 238 150 19 chr20 44572446 44572606 -27581276 - MIR SINE MIR -15 247 67 367 291 132 7 chr20 44572951 44573090 -27580792 - MIR SINE MIR -65 143 20 204 298 50 8 chr20 44573240 44573361 -27580521 + L2 LINE L2 2477 2602 -712 747 215 0 0 chr20 44573370 44573593 -27580289 + (ATGGTG)n Simple_repeat Simple_repeat 1 223 0 699 211 0 0 chr20 44573599 44573770 -27580112 + (TGG)n Simple_repeat Simple_repeat 3 173 0 1129 292 84 36 chr20 44573835 44574490 -27579392 + L2 LINE L2 2605 3297 -16 306 73 0 0 chr20 44574493 44574534 -27579348 + (TGAA)n Simple_repeat Simple_repeat 1 41 0 21 0 0 0 chr20 44574669 44574690 -27579192 + AT_rich Low_complexity Low_complexity 1 21 0 1328 221 54 57 chr20 44575157 44575546 -27578336 + MLT1B LTR MaLR 1 388 -2 618 288 72 8 chr20 44575849 44576099 -27577783 - L2 LINE L2 -3 3310 3045 847 259 65 7 chr20 44576099 44576393 -27577489 - LTR16C LTR ERVL -1 490 180 332 271 8 16 chr20 44576524 44576646 -27577236 - L2 LINE L2 -251 3062 2942 754 135 14 7 chr20 44576776 44576917 -27576965 + CT-rich Low_complexity Low_complexity 1 142 0 664 200 45 0 chr20 44577449 44577604 -27576278 - LTR16C LTR ERVL -1 490 329 464 258 52 70 chr20 44577638 44577769 -27576113 - LTR16C LTR ERVL -146 345 218 1914 140 9 44 chr20 44577769 44578084 -27575798 + AluJo SINE Alu 1 304 -8 464 258 52 70 chr20 44578084 44578181 -27575701 - LTR16C LTR ERVL -273 218 121 412 324 102 19 chr20 44578718 44579089 -27574793 - L2 LINE L2 -55 3258 2857 2013 155 0 0 chr20 44580276 44580579 -27573303 + AluJo SINE Alu 5 307 -5 1595 182 70 0 chr20 44581459 44581745 -27572137 + AluJo SINE Alu 7 312 0 432 97 0 0 chr20 44581857 44581929 -27571953 - Alu SINE Alu -3 309 238 1693 112 46 14 chr20 44582182 44582467 -27571415 + L1PA16 LINE L1 5863 6156 -10 1964 143 0 31 chr20 44582467 44582761 -27571121 + AluJo SINE Alu 1 285 -27 198 0 0 0 chr20 44582761 44582783 -27571099 + (TTAA)n Simple_repeat Simple_repeat 1 22 0 202 318 24 35 chr20 44582798 44582883 -27570999 - L2 LINE L2 -5 3267 3184 375 185 11 33 chr20 44583021 44583113 -27570769 + L1MB4 LINE L1 6074 6163 -17 213 39 0 0 chr20 44583126 44583152 -27570730 + (TA)n Simple_repeat Simple_repeat 1 26 0 2281 78 11 0 chr20 44583152 44583435 -27570447 - AluSp SINE Alu -27 286 1 1153 142 46 0 chr20 44583445 44583663 -27570219 - L1MB3 LINE L1 -3 6180 5953 1386 109 0 6 chr20 44583666 44583849 -27570033 - AluSg/x SINE Alu -10 302 121 422 296 61 8 chr20 44583856 44583988 -27569894 - L2 LINE L2 0 3272 3134 225 213 21 0 chr20 44584099 44584146 -27569736 + MIR SINE MIR 100 147 -61 253 174 0 0 chr20 44584247 44584293 -27569589 - MIR SINE MIR -109 153 108 1638 176 77 39 chr20 44584775 44585138 -27568744 - MLT1B LTR MaLR -12 378 2 1071 191 19 95 chr20 44585166 44585491 -27568391 + L1ME1 LINE L1 5867 6166 0 298 303 25 8 chr20 44585508 44585627 -27568255 + MIR SINE MIR 138 258 -4 500 276 83 17 chr20 44585974 44585994 -27567888 - MIR SINE MIR -44 218 201 314 215 13 0 chr20 44585994 44586073 -27567809 + MER116 DNA Mariner 1 80 0 500 276 83 17 chr20 44586073 44586233 -27567649 - MIR SINE MIR -61 201 26 242 136 23 0 chr20 44587313 44587357 -27566525 - L2 LINE L2 0 3313 3269 742 270 14 67 chr20 44587378 44587438 -27566444 + MLT1H1 LTR MaLR 3 65 -477 2575 74 0 0 chr20 44587438 44587749 -27566133 + AluY SINE Alu 1 311 0 742 270 14 67 chr20 44587749 44587956 -27565926 + MLT1H1 LTR MaLR 65 256 -286 652 266 46 0 chr20 44587971 44588144 -27565738 + MLT1H1 LTR MaLR 375 555 0 2568 73 0 0 chr20 44588872 44589173 -27564709 - AluSq SINE Alu -12 301 1 295 220 220 20 chr20 44589180 44589280 -27564602 - MER5B DNA MER1_type -52 126 7 738 210 74 0 chr20 44589381 44589543 -27564339 + MER63B DNA MER1_type 1 174 -262 413 248 177 7 chr20 44589623 44589764 -27564118 + MER5A DNA MER1_type 25 189 0 1644 175 10 23 chr20 44589808 44590265 -27563617 + AluJo SINE Alu 6 458 0 277 324 24 53 chr20 44590280 44590450 -27563432 - L2 LINE L2 -202 3070 2906 518 202 57 8 chr20 44590495 44590619 -27563263 + MER5A DNA MER1_type 5 134 -55 1965 85 4 0 chr20 44590620 44590867 -27563015 - AluSx SINE Alu -4 308 61 184 304 72 0 chr20 44590981 44591050 -27562832 + L2 LINE L2 2977 3050 -222 678 268 11 16 chr20 44591227 44591410 -27562472 - MIR SINE MIR -14 248 67 295 273 207 8 chr20 44591930 44592051 -27561831 + MIR SINE MIR 117 261 -1 1475 196 23 4 chr20 44592217 44592504 -27561378 + AluJb SINE Alu 17 308 0 761 297 37 0 chr20 44592692 44592938 -27560944 + MIR SINE MIR 8 262 0 292 274 63 15 chr20 44593104 44593223 -27560659 - MIR SINE MIR -42 166 41 194 348 33 0 chr20 44593378 44593470 -27560412 + MIR SINE MIR 167 261 -1 1918 160 0 7 chr20 44593487 44593781 -27560101 - AluJb SINE Alu -20 292 1 348 285 192 6 chr20 44594098 44594270 -27559612 - L2 LINE L2 -221 3092 2889 201 267 8 46 chr20 44594843 44594974 -27558908 + (CCCCG)n Simple_repeat Simple_repeat 3 128 0 656 290 130 13 chr20 44595819 44596119 -27557763 + L2 LINE L2 2979 3313 0 196 286 154 11 chr20 44596124 44596215 -27557667 + L2 LINE L2 3169 3272 0 2323 107 0 0 chr20 44596246 44596537 -27557345 + AluSx SINE Alu 1 291 -21 888 269 5 5 chr20 44596609 44596825 -27557057 - MIR SINE MIR 0 262 47 597 301 1 5 chr20 44597075 44597260 -27556622 - MIR SINE MIR -62 200 16 292 230 266 22 chr20 44598036 44598175 -27555707 + L2 LINE L2 3100 3272 0 202 278 14 14 chr20 44599066 44599138 -27554744 + (TG)n Simple_repeat Simple_repeat 1 72 0 249 242 105 18 chr20 44599579 44599707 -27554175 + MIR SINE MIR 77 224 -38 282 329 0 0 chr20 44599868 44599953 -27553929 - L2 LINE L2 0 3313 3229 454 200 40 10 chr20 44599966 44600066 -27553816 - MER103 DNA DNA -63 103 1 238 216 258 31 chr20 44600234 44600331 -27553551 + MIR SINE MIR 117 235 -27 499 206 135 41 chr20 44600673 44600843 -27553039 + MLT1H LTR MaLR 364 549 0 334 279 136 90 chr20 44601812 44602135 -27551747 - L2 LINE L2 -5 3267 2930 1082 268 117 7 chr20 44602142 44602571 -27551311 + L1ME3A LINE L1 5476 5951 -219 1097 196 126 0 chr20 44702780 44702979 -27450903 - MER58A DNA MER1_type 0 224 1 790 276 71 4 chr20 44703146 44703371 -27450511 - MIR SINE MIR -3 259 20 1168 247 139 17 chr20 44703550 44703894 -27449988 + LTR40a LTR ERVL 5 390 -129 1871 137 0 0 chr20 44704006 44704291 -27449591 + MST-int LTR MaLR 15 299 -1352 * 4045 171 0 48 chr20 44704284 44705040 -27448842 + THE1-int LTR MaLR 417 1136 -444 679 105 0 0 chr20 44705144 44705239 -27448643 + MLT1A1 LTR MaLR 271 365 0 215 224 75 30 chr20 44705391 44705458 -27448424 - L2 LINE L2 -62 3210 3141 259 154 31 0 chr20 44706517 44706582 -27447300 + GA-rich Low_complexity Low_complexity 1 67 0 227 393 84 0 chr20 44707079 44707186 -27446696 + L2 LINE L2 291 406 -2908 1532 188 18 7 chr20 44707445 44707727 -27446155 - MER89 LTR ERV1 -3 556 272 615 266 113 45 chr20 44707896 44708250 -27445632 - L2 LINE L2 -1 3312 2935 2483 71 0 3 chr20 44708260 44708570 -27445312 + AluSc SINE Alu 1 309 0 1084 185 45 19 chr20 44708576 44708841 -27445041 - Zaphod DNA AcHobo -165 3866 3595 26 0 0 0 chr20 44708884 44708910 -27444972 + AT_rich Low_complexity Low_complexity 1 26 0 4292 184 35 35 chr20 44709585 44710370 -27443512 + L1MC4 LINE L1 7120 7907 -135 255 79 0 0 chr20 44710370 44710408 -27443474 + (TG)n Simple_repeat Simple_repeat 2 39 0 4292 184 35 35 chr20 44710408 44710545 -27443337 + L1MC4 LINE L1 7906 8042 0 184 304 54 0 chr20 44710574 44710630 -27443252 - L2 LINE L2 -82 3190 3132 2484 227 158 40 chr20 44710921 44711692 -27442190 + MER21B LTR ERV1 1 862 -1 338 350 106 0 chr20 44712604 44712764 -27441118 + MIR3 SINE MIR 10 186 -22 189 0 0 0 chr20 44714021 44714042 -27439840 + (T)n Simple_repeat Simple_repeat 1 21 0 311 204 119 13 chr20 44714045 44714136 -27439746 - MIR SINE MIR -78 130 28 422 341 112 32 chr20 44714870 44715441 -27438441 + L2 LINE L2 2468 3084 -188 264 305 21 21 chr20 44716233 44716328 -27437554 + L2 LINE L2 3219 3313 0 929 165 33 16 chr20 44716411 44716593 -27437289 - MER20 DNA MER1_type -4 215 31 514 271 131 45 chr20 44716711 44716932 -27436950 + MIR SINE MIR 7 246 -16 1631 99 25 8 chr20 44717747 44717989 -27435893 - L1PB1 LINE L1 0 6151 5906 246 108 0 0 chr20 44718352 44718389 -27435493 - MER33 DNA MER1_type -4 320 284 560 180 0 0 chr20 44718391 44718507 -27435375 - AluSx SINE Alu 0 309 194 1034 118 14 0 chr20 44718508 44718652 -27435230 - AluSx SINE Alu -166 146 1 999 199 13 57 chr20 44718654 44718972 -27434910 - MER33 DNA MER1_type -34 290 1 402 318 53 26 chr20 44719760 44719911 -27433971 - MIR SINE MIR -50 212 58 192 125 0 0 chr20 44720441 44720473 -27433409 + (TTA)n Simple_repeat Simple_repeat 3 34 0 301 181 14 42 chr20 44721063 44721135 -27432747 + MIR SINE MIR 84 153 -109 314 342 82 56 chr20 44721235 44721685 -27432197 + L1MEc LINE L1 1748 2209 -4187 2092 126 39 39 chr20 44722662 44723026 -27430856 + THE1B LTR MaLR 1 364 0 1628 156 7 3 chr20 44723141 44723423 -27430459 - L1M4 LINE L1 -533 5651 5369 514 286 42 31 chr20 44724101 44724293 -27429589 + MIR SINE MIR 5 198 -64 191 267 27 113 chr20 44724508 44724658 -27429224 + L3 LINE CR1 802 938 -639 293 310 143 32 chr20 44724867 44724905 -27428977 + L3 LINE CR1 1212 1244 -333 1985 205 87 11 chr20 44724905 44725374 -27428508 - MLT1D LTR MaLR 0 505 1 293 310 143 32 chr20 44725374 44725551 -27428331 + L3 LINE CR1 1244 1451 -126 301 319 134 18 chr20 44725664 44726006 -27427876 - MLT1I LTR MaLR 0 409 28 258 105 0 0 chr20 44726248 44726286 -27427596 + (ATG)n Simple_repeat Simple_repeat 1 38 0 425 317 14 0 chr20 44726766 44726908 -27426974 - MER58B DNA MER1_type 0 341 198 7764 14 1 6 chr20 44727130 44728475 -27425407 + L1PA3 LINE L1 4815 6155 0 44 20 0 0 chr20 44728543 44728594 -27425288 + AT_rich Low_complexity Low_complexity 1 51 0 413 301 180 32 chr20 44728603 44729141 -27424741 - L1ME LINE L1 -646 5518 4902 333 0 0 0 chr20 44729184 44729221 -27424661 + (TA)n Simple_repeat Simple_repeat 2 38 0 239 318 36 42 chr20 44729262 44729709 -27424173 - L1ME LINE L1 -1333 4813 4370 287 250 250 10 chr20 44729773 44729877 -27424005 - MIR SINE MIR -73 189 61 245 310 60 10 chr20 44730805 44730905 -27422977 - L2 LINE L2 0 3272 3168 473 294 72 13 chr20 44731831 44731984 -27421898 + MIR SINE MIR 48 209 -53 1982 247 89 4 chr20 44732416 44732955 -27420927 - MLT1E LTR MaLR -8 585 1 472 114 13 0 chr20 44733342 44733421 -27420461 - MADE1 DNA Mariner 0 80 1 487 295 13 0 chr20 44733706 44733855 -27420027 + MIR SINE MIR 112 262 0 336 247 62 41 chr20 44734799 44734896 -27418986 - MIR SINE MIR -66 196 98 304 386 18 0 chr20 44734924 44735038 -27418844 + L2 LINE L2 3137 3252 -20 1326 289 28 11 chr20 44736086 44736543 -27417339 + LTR16C LTR ERVL 27 491 0 228 298 48 19 chr20 44736543 44736630 -27417252 - MLT1K LTR MaLR -52 536 447 288 198 45 10 chr20 44736760 44737056 -27416826 + (TA)n Simple_repeat Simple_repeat 1 306 0 391 230 28 22 chr20 44737094 44737272 -27416610 + (TA)n Simple_repeat Simple_repeat 2 180 0 1013 284 95 25 chr20 44738221 44739282 -27414600 + L1MEc LINE L1 600 1702 -4513 663 226 42 15 chr20 44739306 44739543 -27414339 - MER106B DNA MER1_type 0 1059 2 1600 219 57 63 chr20 44739545 44740053 -27413829 - MLT1D LTR MaLR 0 505 1 1549 237 48 54 chr20 44740061 44740247 -27413635 + L1MEc LINE L1 1770 1956 -4440 1979 128 0 4 chr20 44740247 44740560 -27413322 + AluSg SINE Alu 10 321 0 1549 237 48 54 chr20 44740560 44741043 -27412839 + L1MEc LINE L1 1956 2436 -3960 3536 239 60 22 chr20 44741053 44742795 -27411087 + L1MCb LINE L1 1 1803 -4761 2221 235 28 14 chr20 44742795 44743374 -27410508 + L1MB5 LINE L1 5586 6172 -2 1174 194 145 18 chr20 44743376 44743777 -27410105 + L1MCb LINE L1 1879 2330 -4234 288 228 98 22 chr20 44743777 44743869 -27410013 - MLT1C LTR MaLR -367 100 2 330 172 23 23 chr20 44743870 44743957 -27409925 + L1MC3 LINE L1 7699 7785 0 * 1464 204 70 82 chr20 44743952 44744090 -27409792 + L1MCb LINE L1 2734 2872 -3692 2684 88 6 0 chr20 44744090 44744443 -27409439 - THE1A LTR MaLR 0 355 1 1464 204 70 82 chr20 44744443 44744493 -27409389 + L1MCb LINE L1 2872 2921 -3643 2090 148 3 0 chr20 44744493 44744803 -27409079 + AluSx SINE Alu 1 311 -1 1464 204 70 82 chr20 44744803 44745092 -27408790 + L1MCb LINE L1 2921 3203 -3361 2160 104 0 49 chr20 44745092 44745399 -27408483 - AluSg SINE Alu -16 294 3 1464 204 70 82 chr20 44745399 44745624 -27408258 + L1MCb LINE L1 3203 3429 -3135 228 278 0 0 chr20 44746197 44746251 -27407631 + L2 LINE L2 3219 3272 0 1835 158 0 35 chr20 44746643 44746954 -27406928 - AluJb SINE Alu -12 300 1 518 298 105 0 chr20 44747257 44747438 -27406444 + MIR SINE MIR 41 240 -22 1843 220 31 21 chr20 44747681 44748103 -27405779 + MSTB LTR MaLR 1 426 0 836 200 64 4 chr20 44748135 44748370 -27405512 + L1MD3 LINE L1 7744 7992 -3 590 299 99 15 chr20 44749139 44749340 -27404542 - MIR SINE MIR -32 230 13 181 111 0 0 chr20 44749346 44749373 -27404509 + L2 LINE L2 3244 3270 -2 253 218 109 69 chr20 44750105 44750206 -27403676 + MIR SINE MIR 57 161 -101 1869 136 0 34 chr20 44750928 44751242 -27402640 + AluSx SINE Alu 1 304 0 258 268 28 0 chr20 44751245 44751316 -27402566 + (CAA)n Simple_repeat Simple_repeat 3 75 0 231 250 44 0 chr20 44751352 44751420 -27402462 + GA-rich Low_complexity Low_complexity 2 72 0 316 296 133 15 chr20 44751476 44751630 -27402252 - MIR SINE MIR -64 144 16 194 273 102 34 chr20 44751702 44751790 -27402092 + L2 LINE L2 398 491 -2823 189 0 0 0 chr20 44751903 44751924 -27401958 + (T)n Simple_repeat Simple_repeat 1 21 0 195 42 0 0 chr20 44751934 44751958 -27401924 + (TTTC)n Simple_repeat Simple_repeat 2 25 0 541 287 10 35 chr20 44752423 44752625 -27401257 - LTR33 LTR ERVL -2 519 323 349 361 0 0 chr20 44752760 44752893 -27400989 - LTR33 LTR ERVL -385 136 4 194 376 113 15 chr20 44753570 44753703 -27400179 + L2 LINE L2 3127 3272 0 367 336 0 8 chr20 44754196 44754324 -27399558 - MIR SINE MIR -62 146 20 1142 182 49 7 chr20 44755533 44755819 -27398063 + MER33 DNA MER1_type 27 324 0 198 118 0 0 chr20 44755884 44755918 -27397964 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 186 321 57 19 chr20 44755929 44755982 -27397900 - L2 LINE L2 -25 3247 3193 185 128 0 26 chr20 44756027 44756066 -27397816 + (CA)n Simple_repeat Simple_repeat 1 38 0 547 250 140 23 chr20 44756743 44757217 -27396665 - LTR50 LTR ERVL -99 696 55 401 276 0 9 chr20 44757426 44757542 -27396340 - MER103 DNA DNA -48 118 4 331 343 8 0 chr20 44757850 44757984 -27395898 + LTR16B LTR ERVL 243 377 -87 28 48 0 0 chr20 44758530 44758572 -27395310 + AT_rich Low_complexity Low_complexity 1 42 0 21 71 0 0 chr20 44758845 44758887 -27394995 + AT_rich Low_complexity Low_complexity 1 42 0 240 243 37 140 chr20 44759627 44759763 -27394119 - MIR SINE MIR -62 200 79 203 261 14 43 chr20 44760113 44760182 -27393700 + L2 LINE L2 3204 3270 -2 21 57 0 0 chr20 44761117 44761152 -27392730 + AT_rich Low_complexity Low_complexity 1 35 0 182 410 79 29 chr20 44761160 44761187 -27392695 - L2 LINE L2 -5 3267 3243 1542 234 11 11 chr20 44761187 44761550 -27392332 + MLT1A1 LTR MaLR 1 363 -2 182 410 79 29 chr20 44761550 44761661 -27392221 - L2 LINE L2 -29 3243 3122 244 331 38 45 chr20 44762747 44762880 -27391002 - MER5B DNA MER1_type 0 178 47 212 258 16 0 chr20 44762973 44763035 -27390847 + (TTCA)n Simple_repeat Simple_repeat 2 64 0 427 298 96 11 chr20 44763178 44763356 -27390526 - MIR SINE MIR -10 252 60 388 234 200 14 chr20 44763547 44763692 -27390190 - MER5B DNA MER1_type 0 178 7 365 340 168 19 chr20 44764127 44764389 -27389493 - L2 LINE L2 -1 3271 2971 193 239 65 76 chr20 44764600 44764692 -27389190 + L3 LINE CR1 815 905 -672 332 362 122 11 chr20 44764788 44765067 -27388815 + L3 LINE CR1 1073 1382 -195 406 281 0 0 chr20 44765285 44765381 -27388501 - MER58A DNA MER1_type -11 96 1 184 296 0 0 chr20 44765383 44765427 -27388455 + L3 LINE CR1 1421 1464 -113 180 0 0 0 chr20 44766882 44766902 -27386980 + (TG)n Simple_repeat Simple_repeat 1 20 0 865 52 30 15 chr20 44766954 44767088 -27386794 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 2079 122 0 0 chr20 44767088 44767367 -27386515 - AluSc SINE Alu -30 279 1 232 276 71 63 chr20 44767417 44767544 -27386338 - MIR SINE MIR -93 169 42 819 224 6 22 chr20 44768015 44768194 -27385688 + LTR28 LTR ERV1 1 176 -844 307 181 14 14 chr20 44768220 44768292 -27385590 + LTR1 LTR ERV1 121 192 -593 * 851 217 75 101 chr20 44768259 44768605 -27385277 + LTR27 LTR ERV1 300 636 0 229 245 143 61 chr20 44768686 44768784 -27385098 - MIR SINE MIR -109 153 48 189 292 28 14 chr20 44769019 44769091 -27384791 + L2 LINE L2 3191 3263 -9 763 186 14 7 chr20 44769981 44770126 -27383756 - MER5A DNA MER1_type -42 147 2 24 0 0 0 chr20 44770454 44770478 -27383404 + AT_rich Low_complexity Low_complexity 1 24 0 182 360 122 7 chr20 44771267 44771414 -27382468 - L2 LINE L2 0 3272 3109 1862 195 33 26 chr20 44771643 44772067 -27381815 + MLT1C LTR MaLR 9 435 -32 2122 183 56 3 chr20 44772067 44772444 -27381438 + MER6 DNA MER2_type 1 397 -468 2123 124 3 0 chr20 44772445 44772735 -27381147 + AluSp SINE Alu 1 291 -22 301 220 0 0 chr20 44772737 44772796 -27381086 + MER6 DNA MER2_type 807 865 0 466 291 94 32 chr20 44773278 44773652 -27380230 + L1ME4a LINE L1 5519 5915 -206 1668 176 0 30 chr20 44773771 44774072 -27379810 - AluJo SINE Alu -8 304 13 724 186 175 11 chr20 44774257 44774440 -27379442 + MER58A DNA MER1_type 12 224 0 1913 148 4 4 chr20 44774652 44774952 -27378930 - AluSx SINE Alu 0 305 6 477 62 0 0 chr20 44775534 44775599 -27378283 + (TTCA)n Simple_repeat Simple_repeat 3 67 0 29 0 0 0 chr20 44775731 44775760 -27378122 + AT_rich Low_complexity Low_complexity 1 29 0 603 291 54 21 chr20 44775814 44776055 -27377827 - MIR SINE MIR -2 260 12 1777 172 67 82 chr20 44776276 44776741 -27377141 - MER31B LTR ERV1 0 466 9 237 293 30 61 chr20 44777041 44777140 -27376742 + MER5A DNA MER1_type 49 144 -45 392 327 67 26 chr20 44778252 44778521 -27375361 + L2 LINE L2 2474 2753 -561 280 248 9 55 chr20 44778764 44778873 -27375009 + L2 LINE L2 3128 3231 -82 448 309 7 0 chr20 44779554 44779690 -27374192 + MIR SINE MIR 107 243 -19 3554 170 91 27 chr20 44779750 44780533 -27373349 - LTR1B LTR ERV1 -7 819 8 1741 127 33 0 chr20 44780689 44780965 -27372917 + L1PB3 LINE L1 5870 6154 0 284 298 54 71 chr20 44781346 44781769 -27372113 - L1ME LINE L1 -292 5829 5414 363 279 14 61 chr20 44782202 44782349 -27371533 - L2 LINE L2 0 3272 3133 686 273 125 36 chr20 44783196 44783533 -27370349 + L2 LINE L2 2946 3312 -1 1010 201 0 6 chr20 44784919 44785093 -27368789 + FAM SINE Alu 1 173 -2 978 260 44 52 chr20 44785122 44785506 -27368376 + L1ME3A LINE L1 5742 6122 -48 1107 123 0 0 chr20 44787485 44787640 -27366242 + LTR8A LTR ERV1 1 155 -572 1614 107 0 13 chr20 44787640 44787865 -27366017 - AluSp SINE Alu -7 306 85 302 0 26 0 chr20 44787932 44787970 -27365912 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 26 50 0 0 chr20 44788755 44788795 -27365087 + AT_rich Low_complexity Low_complexity 1 40 0 24 32 0 0 chr20 44788840 44788871 -27365011 + AT_rich Low_complexity Low_complexity 1 31 0 1300 159 130 25 chr20 44788903 44789179 -27364703 - AluJo SINE Alu -7 305 1 2173 92 0 0 chr20 44789224 44789496 -27364386 + AluSq SINE Alu 30 301 -12 186 133 0 0 chr20 44789501 44789531 -27364351 + (GAAA)n Simple_repeat Simple_repeat 1 30 0 270 287 78 6 chr20 44790198 44790365 -27363517 + L1ME4a LINE L1 5936 6114 -7 291 263 12 0 chr20 44790632 44790712 -27363170 + MIR SINE MIR 163 243 -19 245 354 102 19 chr20 44790712 44790927 -27362955 + MIR SINE MIR 16 248 -14 206 361 14 0 chr20 44791387 44791459 -27362423 + L2 LINE L2 3125 3197 -75 254 198 20 0 chr20 44791524 44791625 -27362257 + (TCTA)n Simple_repeat Simple_repeat 2 104 0 367 288 42 72 chr20 44791630 44791894 -27361988 - L2 LINE L2 -38 3275 3020 1057 243 19 13 chr20 44792420 44792826 -27361056 - MLT1B LTR MaLR 0 390 3 378 313 180 0 chr20 44794017 44794234 -27359648 + L3 LINE CR1 1072 1327 -250 669 43 43 9 chr20 44794388 44794503 -27359379 + (TCTA)n Simple_repeat Simple_repeat 2 120 0 220 368 70 10 chr20 44795351 44795552 -27358330 - MIR SINE MIR -49 213 1 1133 251 48 14 chr20 44795604 44795899 -27357983 - MLT1F1 LTR MaLR 0 567 263 424 322 75 0 chr20 44795895 44796041 -27357841 - MLT1F1 LTR MaLR -435 158 2 * 360 236 38 28 chr20 44796379 44796485 -27357397 + MER21B LTR ERV1 1 107 -756 336 271 0 0 chr20 44796482 44796552 -27357330 + MER21B LTR ERV1 19 88 -775 * 3758 210 52 16 chr20 44796556 44797348 -27356534 + MER21B LTR ERV1 43 862 -1 249 36 0 0 chr20 44798980 44799008 -27354874 + MER21B LTR ERV1 239 266 -597 1644 190 32 34 chr20 44799057 44799196 -27354686 - Zaphod DNA AcHobo -27 4004 3866 2138 121 0 13 chr20 44799196 44799509 -27354373 + AluSc SINE Alu 1 309 0 1644 190 32 34 chr20 44799509 44799780 -27354102 - Zaphod DNA AcHobo -165 3866 3595 * 2212 203 73 83 chr20 44799778 44800611 -27353271 - Zaphod DNA AcHobo -3041 990 166 3401 132 143 133 chr20 44800654 44801216 -27352666 - L1MC3 LINE L1 0 7785 7116 256 269 43 11 chr20 44801216 44801309 -27352573 - MLT1F1 LTR MaLR -437 130 35 3401 132 143 133 chr20 44801309 44801671 -27352211 - L1MC3 LINE L1 -669 7116 6759 375 282 0 0 chr20 44801786 44801889 -27351993 + MIR SINE MIR 160 262 0 1737 166 79 18 chr20 44802171 44802514 -27351368 - THE1C LTR MaLR -11 364 1 180 0 0 0 chr20 44802881 44802901 -27350981 + (TA)n Simple_repeat Simple_repeat 2 21 0 859 269 40 0 chr20 44803088 44803311 -27350571 + MIR SINE MIR 10 241 -21 400 236 118 8 chr20 44803669 44803796 -27350086 + MIR SINE MIR 39 179 -83 198 0 0 0 chr20 44804600 44804622 -27349260 + (T)n Simple_repeat Simple_repeat 1 22 0 735 216 111 58 chr20 44804724 44804932 -27348950 + MER20 DNA MER1_type 1 219 0 548 127 0 0 chr20 44804952 44805031 -27348851 + MADE1 DNA Mariner 1 79 -1 336 191 60 12 chr20 44805179 44805263 -27348619 + MIR SINE MIR 98 185 -77 458 230 96 45 chr20 44806097 44806275 -27347607 + MIR SINE MIR 57 243 -19 761 320 42 65 chr20 44808044 44808519 -27345363 - LTR16B LTR ERVL 0 464 1 204 310 11 11 chr20 44808598 44808685 -27345197 + (CATATA)n Simple_repeat Simple_repeat 4 90 0 236 268 0 0 chr20 44809166 44809222 -27344660 - L2 LINE L2 0 3272 3217 196 326 87 14 chr20 44809443 44809581 -27344301 + MIR3 SINE MIR 37 184 -24 1249 178 163 31 chr20 44809763 44810021 -27343861 - AluJo SINE Alu -9 293 2 273 330 0 0 chr20 44810049 44810137 -27343745 + MIR SINE MIR 53 140 -122 285 269 84 17 chr20 44811071 44811190 -27342692 + MIR SINE MIR 29 155 -107 2512 114 11 19 chr20 44811908 44812286 -27341596 - THE1C LTR MaLR 0 375 1 212 187 0 0 chr20 44812913 44812963 -27340919 + MIR SINE MIR 104 152 -61 199 200 55 0 chr20 44813024 44813079 -27340803 + MIR SINE MIR 166 223 -39 2334 115 0 0 chr20 44813562 44813867 -27340015 - AluSc SINE Alu -4 305 1 29 60 0 0 chr20 44814153 44814203 -27339679 + AT_rich Low_complexity Low_complexity 1 50 0 314 273 0 26 chr20 44814266 44814343 -27339539 + MIR SINE MIR 14 88 -174 991 282 49 14 chr20 44815086 44815433 -27338449 - LTR16A LTR ERVL -5 445 87 507 322 17 0 chr20 44815695 44815869 -27338013 + MIR SINE MIR 6 182 -80 616 205 180 6 chr20 44816302 44816463 -27337419 + MER5A DNA MER1_type 1 189 0 920 181 12 6 chr20 44816472 44816638 -27337244 - MER58B DNA MER1_type -1 340 174 183 100 0 0 chr20 44816757 44816787 -27337095 + (TTCA)n Simple_repeat Simple_repeat 3 32 0 271 324 139 23 chr20 44816808 44817067 -27336815 - L2 LINE L2 -25 3288 3000 413 301 184 0 chr20 44817104 44817267 -27336615 - MIR SINE MIR -67 195 3 265 400 38 0 chr20 44817362 44817467 -27336415 - L2 LINE L2 -30 3242 3134 6249 229 64 70 chr20 44818017 44818754 -27335128 + L1MD1 LINE L1 2330 3070 -3172 814 233 23 11 chr20 44818754 44818930 -27334952 + FRAM SINE Alu 1 170 -6 6249 229 64 70 chr20 44818930 44821698 -27332184 + L1MD1 LINE L1 3070 5974 -268 424 303 74 52 chr20 44821858 44822172 -27331710 + L1ME LINE L1 5332 5658 -463 2021 181 80 11 chr20 44822172 44822608 -27331274 - MLT1C LTR MaLR -1 466 1 424 303 74 52 chr20 44822608 44822699 -27331183 + L1ME LINE L1 5658 5746 -375 302 130 14 27 chr20 44822724 44822796 -27331086 - Alu SINE Alu -265 38 1 255 276 4 39 chr20 44822818 44822922 -27330960 + MIR SINE MIR 88 148 -60 59 46 0 0 chr20 44823293 44823380 -27330502 + AT_rich Low_complexity Low_complexity 1 87 0 357 301 28 28 chr20 44824650 44824793 -27329089 - MIR SINE MIR -6 256 114 486 108 0 27 chr20 44824869 44824943 -27328939 - MER3 DNA MER1_type -132 77 6 279 93 0 0 chr20 44825385 44825428 -27328454 + (TG)n Simple_repeat Simple_repeat 2 44 0 367 151 47 23 chr20 44825980 44826066 -27327816 - MER103 DNA DNA -31 135 48 628 72 0 0 chr20 44826066 44826149 -27327733 - L1PA4 LINE L1 -188 5967 5885 231 36 0 0 chr20 44826149 44826177 -27327705 + (CAAA)n Simple_repeat Simple_repeat 3 30 0 253 327 44 44 chr20 44826962 44827121 -27326761 + L2 LINE L2 2932 3090 -182 2263 78 0 0 chr20 44827132 44827443 -27326439 - AluSc SINE Alu 0 311 1 212 262 167 32 chr20 44827820 44827946 -27325936 - MIR SINE MIR -53 209 67 243 292 15 0 chr20 44828205 44828270 -27325612 + GA-rich Low_complexity Low_complexity 6 71 0 1791 201 12 32 chr20 44828311 44828720 -27325162 + L1MA10 LINE L1 5921 6321 -13 737 249 68 27 chr20 44828735 44829073 -27324809 + L1MC5 LINE L1 7534 7885 -76 22 0 0 0 chr20 44829087 44829109 -27324773 + AT_rich Low_complexity Low_complexity 1 22 0 2111 121 0 16 chr20 44829262 44829567 -27324315 - AluSq SINE Alu -13 300 1 21 0 0 0 chr20 44829708 44829729 -27324153 + AT_rich Low_complexity Low_complexity 1 21 0 439 200 20 30 chr20 44831823 44831923 -27321959 - MER5B DNA MER1_type -5 173 75 217 249 103 103 chr20 44831929 44832114 -27321768 - L2 LINE L2 -1597 1717 1533 21 36 0 0 chr20 44832911 44832939 -27320943 + AT_rich Low_complexity Low_complexity 1 28 0 399 341 119 37 chr20 44833387 44833739 -27320143 + L3 LINE CR1 260 640 -937 207 170 19 75 chr20 44833776 44833829 -27320053 + L2 LINE L2 3261 3310 -3 209 115 327 0 chr20 44834795 44834847 -27319035 + MER5A DNA MER1_type 44 112 -77 346 191 0 21 chr20 44834985 44835079 -27318803 + G-rich Low_complexity Low_complexity 2 93 0 1530 188 35 17 chr20 44835397 44835520 -27318362 + AluJo SINE Alu 1 120 -192 423 0 0 0 chr20 44835520 44835567 -27318315 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 1530 188 35 17 chr20 44835567 44835731 -27318151 + AluJo SINE Alu 120 293 -19 228 305 110 104 chr20 44835785 44836159 -27317723 - L2 LINE L2 -88 3184 2809 183 318 106 20 chr20 44837313 44837464 -27316418 + L2 LINE L2 2226 2389 -925 182 281 263 9 chr20 44837641 44837755 -27316127 + L2 LINE L2 2831 2973 -299 1186 328 47 24 chr20 44838958 44839675 -27314207 - L2 LINE L2 0 3313 2577 218 286 100 113 chr20 44839715 44840085 -27313797 - L3 LINE CR1 -96 1481 1117 243 0 0 0 chr20 44840236 44840263 -27313619 + (TAG)n Simple_repeat Simple_repeat 1 27 0 988 270 77 49 chr20 44841239 44841732 -27312150 + MLT1J LTR MaLR 3 509 -2 643 233 50 10 chr20 44842782 44842984 -27310898 + L1ME2 LINE L1 5677 5886 -278 1237 234 27 35 chr20 44843049 44843387 -27310495 - L1ME2 LINE L1 -281 5883 5549 6142 102 44 2 chr20 44843416 44844422 -27309460 - L1MA1 LINE L1 -101 6201 5155 533 233 75 0 chr20 44844423 44844543 -27309339 - L1ME2 LINE L1 -604 5560 5432 878 276 78 8 chr20 44844543 44844916 -27308966 - Charlie4a DNA MER1_type -70 438 40 374 326 28 39 chr20 44845202 44845380 -27308502 - MER5B DNA MER1_type -1 177 2 192 77 0 0 chr20 44846237 44846263 -27307619 + (TTG)n Simple_repeat Simple_repeat 2 27 0 2140 87 7 30 chr20 44846623 44846923 -27306959 + AluSq SINE Alu 1 293 -20 2190 118 3 3 chr20 44847018 44847314 -27306568 + AluSc SINE Alu 1 296 -13 1038 364 15 13 chr20 44847549 44848005 -27305877 + L1M3b LINE L1 1217 1673 -5823 4072 242 57 12 chr20 44848085 44850379 -27303503 + L1M3b LINE L1 1949 4350 -3215 1759 181 3 48 chr20 44850536 44850889 -27302993 - MER1B DNA MER1_type 0 337 1 224 178 10 168 chr20 44851301 44851402 -27302480 + L2 LINE L2 3188 3272 0 1846 142 3 7 chr20 44853322 44853630 -27300252 + AluSx SINE Alu 1 307 0 220 282 130 69 chr20 44854957 44855088 -27298794 - MIR3 SINE MIR -67 141 3 1299 33 0 0 chr20 44855479 44855630 -27298252 - L1PA2 LINE L1 -1900 4246 4096 9728 25 0 0 chr20 44855630 44857545 -27296337 + L1PA2 LINE L1 4236 6150 -5 413 319 0 0 chr20 44858319 44858432 -27295450 + MER117 DNA MER1_type 85 197 0 293 188 32 204 chr20 44858432 44858618 -27295264 - MIR3 SINE MIR -48 160 7 2140 106 40 7 chr20 44859341 44859644 -27294238 - AluSq SINE Alu 0 313 1 306 280 173 27 chr20 44860051 44860201 -27293681 + MIR SINE MIR 46 217 -45 206 318 0 0 chr20 44860603 44860666 -27293216 + G-rich Low_complexity Low_complexity 6 68 0 304 301 51 64 chr20 44861379 44861535 -27292347 - MIR SINE MIR -94 168 15 870 260 49 77 chr20 44861917 44862348 -27291534 + L1ME LINE L1 50 468 -5955 1672 163 32 73 chr20 44862424 44862793 -27291089 - MLT1B LTR MaLR -10 380 27 4628 194 79 48 chr20 44862807 44863049 -27290833 - L1MC3 LINE L1 -662 7123 6890 239 53 0 26 chr20 44863049 44863087 -27290795 + (TTTG)n Simple_repeat Simple_repeat 3 39 0 4628 194 79 48 chr20 44863087 44864059 -27289823 - L1MC3 LINE L1 -895 6890 5871 1619 223 18 72 chr20 44864101 44864587 -27289295 + MLT1C-int LTR MaLR 963 1725 -10 1507 244 25 23 chr20 44864609 44865040 -27288842 + MLT1C LTR MaLR 34 465 -2 1198 254 40 27 chr20 44865042 44865412 -27288470 - L1M4 LINE L1 -1840 4306 3932 24 0 0 0 chr20 44865438 44865462 -27288420 + AT_rich Low_complexity Low_complexity 1 24 0 1421 273 55 12 chr20 44865470 44866224 -27287658 + L1ME LINE L1 3931 4735 -2206 3523 252 69 16 chr20 44866307 44867843 -27286039 + L1ME LINE L1 4851 6461 -500 1832 167 63 61 chr20 44867846 44868272 -27285610 - MSTA LTR MaLR -1 427 1 8246 177 36 10 chr20 44868272 44869860 -27284022 - MSTA-int LTR MaLR 0 1651 25 711 306 84 10 chr20 44870219 44870516 -27283366 + MLT1J1 LTR MaLR 4 322 -124 3938 109 0 8 chr20 44870714 44871229 -27282653 - MER9 LTR ERVK 0 511 1 2187 62 37 0 chr20 44871229 44871501 -27282381 - HERVK9 LTR ERVK 0 5916 5635 15666 70 2 0 chr20 44871597 44873518 -27280364 - HERVK9 LTR ERVK -282 5634 3711 21397 65 16 24 chr20 44873518 44875458 -27278424 - HERVK9 LTR ERVK -3130 2786 817 183 211 0 105 chr20 44875458 44875515 -27278367 - MER5B DNA MER1_type -70 108 58 21397 65 16 24 chr20 44875515 44876326 -27277556 - HERVK9 LTR ERVK -5099 817 1 3940 96 0 19 chr20 44876326 44876847 -27277035 - MER9 LTR ERVK 0 511 1 250 330 19 0 chr20 44877302 44877408 -27276474 - MIR SINE MIR -13 249 142 2156 87 6 69 chr20 44877492 44877824 -27276058 - AluY SINE Alu 0 311 1 262 273 0 0 chr20 44878204 44878270 -27275612 - MIR SINE MIR -25 237 172 1060 186 11 6 chr20 44878278 44878461 -27275421 - MER5A DNA MER1_type -5 184 1 1845 197 77 22 chr20 44878523 44878939 -27274943 - MLT1C LTR MaLR -2 465 27 315 296 0 12 chr20 44878952 44879033 -27274849 - MIR SINE MIR -170 92 13 700 252 26 10 chr20 44880058 44880269 -27273613 + L1MD3 LINE L1 6137 7976 -19 2122 122 10 7 chr20 44881475 44881771 -27272111 - AluSx SINE Alu -15 297 1 351 273 67 30 chr20 44881825 44881990 -27271892 - L2 LINE L2 -49 3264 3094 325 284 86 37 chr20 44882952 44883114 -27270768 - MARNA DNA Mariner -392 194 25 32 0 0 0 chr20 44883192 44883224 -27270658 + AT_rich Low_complexity Low_complexity 1 32 0 301 189 0 0 chr20 44884481 44884534 -27269348 - L1MD1 LINE L1 -262 5980 5928 516 219 44 15 chr20 44884564 44884701 -27269181 - L1M4 LINE L1 -3454 2692 2552 600 332 23 35 chr20 44984802 44985045 -27168837 - L2 LINE L2 -666 2648 2409 2164 154 146 34 chr20 44985045 44985512 -27168370 + MLT2B1 LTR ERVL 2 520 0 600 332 23 35 chr20 44985512 44985614 -27168268 - L2 LINE L2 -905 2409 2307 2402 105 0 10 chr20 44986020 44986334 -27167548 + AluSx SINE Alu 1 311 -1 276 297 77 41 chr20 44986391 44986586 -27167296 - L2 LINE L2 -712 2602 2401 699 202 0 0 chr20 44986916 44987045 -27166837 - FLAM_A SINE Alu -4 129 1 437 94 0 0 chr20 44987295 44987359 -27166523 + MER53 DNA DNA 1 64 -125 1237 99 0 0 chr20 44987368 44987530 -27166352 - AluSq SINE Alu 0 313 152 1167 110 0 0 chr20 44987593 44987739 -27166143 - AluSq SINE Alu -167 146 1 414 191 82 18 chr20 44987746 44987856 -27166026 + MER53 DNA DNA 73 189 0 202 318 182 0 chr20 44988488 44988598 -27165284 - MIR3 SINE MIR -44 164 35 2020 167 0 0 chr20 44988847 44989158 -27164724 - AluJb SINE Alu -1 311 1 249 252 112 0 chr20 44989409 44989516 -27164366 + L2 LINE L2 2914 3032 -240 661 137 0 0 chr20 44989674 44989776 -27164106 + AluS SINE Alu 1 102 -211 901 81 0 0 chr20 44989802 44989913 -27163969 + AluSg/x SINE Alu 193 303 -9 482 238 73 26 chr20 44989988 44990139 -27163743 - MER63B DNA MER1_type -263 173 16 520 324 88 15 chr20 44990260 44990352 -27163530 + LTR16C LTR ERVL 69 153 -338 2086 189 65 7 chr20 44990352 44990811 -27163071 - MER66B LTR ERV1 0 486 1 520 324 88 15 chr20 44990811 44990980 -27162902 + LTR16C LTR ERVL 153 349 -142 2499 92 0 3 chr20 44991110 44991424 -27162458 + AluSp SINE Alu 1 313 0 312 266 43 21 chr20 44991503 44991597 -27162285 + LTR16C LTR ERVL 385 480 -11 952 181 201 36 chr20 44992065 44992314 -27161568 + AluJo SINE Alu 3 292 -10 2232 114 0 3 chr20 44992324 44992614 -27161268 + AluSg SINE Alu 1 289 -21 2036 107 7 7 chr20 44992624 44992896 -27160986 + AluSx SINE Alu 1 272 -40 237 310 122 33 chr20 44993350 44993743 -27160139 + L1M4 LINE L1 2788 3215 -2931 2270 107 0 0 chr20 44993795 44994086 -27159796 + AluSx SINE Alu 1 291 -21 1396 178 66 49 chr20 44994262 44994605 -27159277 - MLT1B LTR MaLR 0 457 43 672 50 10 30 chr20 44994605 44994705 -27159177 + MER4A LTR ERV1 1 98 -566 1899 107 158 75 chr20 44994705 44995078 -27158804 + MER4A LTR ERV1 261 664 0 345 176 0 29 chr20 44995078 44995124 -27158758 - MLT1B LTR MaLR -346 44 1 234 345 166 0 chr20 44995841 44995980 -27157902 + L3 LINE CR1 1412 1573 -4 2415 88 0 3 chr20 44996376 44996684 -27157198 + AluSg SINE Alu 1 307 -3 1680 164 10 10 chr20 44997033 44997331 -27156551 + AluJo SINE Alu 1 298 -14 23 0 0 29 chr20 44997436 44997456 -27156426 + AT_rich Low_complexity Low_complexity 1 21 -12 2430 69 0 0 chr20 44997456 44997746 -27156136 + AluY SINE Alu 1 290 -21 23 0 0 29 chr20 44997746 44997759 -27156123 + AT_rich Low_complexity Low_complexity 21 33 0 1992 135 21 0 chr20 44997759 44998041 -27155841 - AluJb SINE Alu -24 288 1 953 244 99 44 chr20 44998441 44998806 -27155076 + MLT1I LTR MaLR 25 409 0 324 48 0 0 chr20 44999220 44999262 -27154620 + (CA)n Simple_repeat Simple_repeat 2 43 0 274 233 0 17 chr20 44999262 44999322 -27154560 - MIR SINE MIR -163 99 41 930 225 43 10 chr20 44999343 44999552 -27154330 - MER58A DNA MER1_type -3 221 6 311 266 37 46 chr20 44999694 44999803 -27154079 - L1M4 LINE L1 -1549 4597 4490 2303 95 7 3 chr20 45000185 45000490 -27153392 + AluSx SINE Alu 7 312 0 1537 255 33 73 chr20 45001419 45001789 -27152093 + L1MC4a LINE L1 5362 5745 -2063 466 190 147 0 chr20 45001789 45001905 -27151977 + FLAM_A SINE Alu 1 133 0 1537 255 33 73 chr20 45001905 45002052 -27151830 + L1MC4a LINE L1 5745 5896 -1912 1012 236 28 0 chr20 45002052 45002268 -27151614 - MER58A DNA MER1_type 0 224 3 1537 255 33 73 chr20 45002268 45002295 -27151587 + L1MC4a LINE L1 5896 5923 -1885 2290 103 7 0 chr20 45002295 45002605 -27151277 + AluSx SINE Alu 1 312 0 1537 255 33 73 chr20 45002605 45002701 -27151181 + L1MC4a LINE L1 5923 5978 -1830 1334 157 9 5 chr20 45002990 45003206 -27150676 - AluJo SINE Alu -9 303 87 251 248 46 98 chr20 45003775 45003886 -27149996 - MIR SINE MIR -50 212 110 2158 115 30 7 chr20 45003886 45004181 -27149701 + AluSx SINE Alu 1 302 -10 251 248 46 98 chr20 45004181 45004222 -27149660 - MIR SINE MIR -152 110 68 293 211 56 22 chr20 45004243 45004333 -27149549 + L1ME3A LINE L1 5622 5714 -456 482 192 0 30 chr20 45004435 45004534 -27149348 - SVA Other Other -783 603 508 752 223 194 64 chr20 45004534 45004626 -27149256 + L1ME3A LINE L1 5703 5782 -388 924 115 49 22 chr20 45004626 45004809 -27149073 + L1MA7 LINE L1 6103 6290 -1 1699 165 13 35 chr20 45004811 45005127 -27148755 + AluJo SINE Alu 1 309 -3 752 223 194 64 chr20 45005127 45005439 -27148443 + L1ME3A LINE L1 5782 6163 -7 5272 161 128 12 chr20 45005514 45006657 -27147225 + MER52C LTR ERV1 4 1278 0 225 299 153 7 chr20 45006913 45007057 -27146825 - MIR SINE MIR -77 185 21 382 235 36 66 chr20 45007449 45007615 -27146267 - MLT1H LTR MaLR -2 547 387 2338 84 10 14 chr20 45007861 45008157 -27145725 - AluSp SINE Alu -18 295 1 238 217 71 159 chr20 45008514 45008601 -27145281 + L2 LINE L2 3107 3200 -113 2450 84 0 13 chr20 45008601 45008909 -27144973 + AluY SINE Alu 1 304 -7 238 217 71 159 chr20 45008909 45008934 -27144948 + L2 LINE L2 3200 3226 -87 1626 157 92 18 chr20 45008934 45009215 -27144667 - AluJb SINE Alu -10 302 1 238 217 71 159 chr20 45009215 45009304 -27144578 + L2 LINE L2 3226 3290 -23 1852 157 0 23 chr20 45009304 45009609 -27144273 - AluJb SINE Alu -14 298 1 238 217 71 159 chr20 45009609 45009631 -27144251 + L2 LINE L2 3290 3312 -1 230 212 121 0 chr20 45011830 45011896 -27141986 + MIR3 SINE MIR 85 158 -50 293 274 84 50 chr20 45012087 45012266 -27141616 - L2 LINE L2 -208 3105 2921 191 336 99 8 chr20 45012564 45012695 -27141187 + MIR3 SINE MIR 35 177 -31 2306 79 3 10 chr20 45012718 45013010 -27140872 + AluY SINE Alu 1 290 -21 181 270 180 11 chr20 45013465 45013554 -27140328 - MIR SINE MIR -82 126 23 2455 85 3 0 chr20 45013960 45014265 -27139617 + AluSp SINE Alu 1 306 -7 1528 187 30 30 chr20 45018913 45019212 -27134670 + AluJo SINE Alu 1 299 -13 1716 190 10 0 chr20 45019247 45019536 -27134346 + AluJb SINE Alu 1 292 -20 898 67 42 8 chr20 45019972 45020092 -27133790 + AluSq/x SINE Alu 15 138 -175 360 212 177 0 chr20 45020100 45020213 -27133669 + L1MEc LINE L1 1662 1794 -4602 1727 137 6 104 chr20 45020428 45020633 -27133249 - AluJo SINE Alu -5 307 146 2414 95 0 0 chr20 45020633 45020927 -27132955 + AluSg SINE Alu 1 294 -16 1727 137 6 104 chr20 45020927 45021056 -27132826 - AluJo SINE Alu -166 146 6 1018 196 15 39 chr20 45021520 45021647 -27132235 + AluJo SINE Alu 1 124 -188 2376 82 0 0 chr20 45021647 45021929 -27131953 + AluY SINE Alu 1 327 0 406 0 0 0 chr20 45021929 45021974 -27131908 + (TAAA)n Simple_repeat Simple_repeat 2 76 0 1018 196 15 39 chr20 45021974 45022049 -27131833 + AluJo SINE Alu 124 199 -113 462 280 113 11 chr20 45022824 45023010 -27130872 - MIR SINE MIR -12 250 46 1064 155 183 66 chr20 45023216 45023331 -27130551 + MLT1B LTR MaLR 1 101 -289 1977 109 20 53 chr20 45023331 45023633 -27130249 + AluSx SINE Alu 1 292 -20 1064 155 183 66 chr20 45023633 45023866 -27130016 + MLT1B LTR MaLR 101 390 0 264 252 48 48 chr20 45024602 45024705 -27129177 + L2 LINE L2 3168 3270 -43 1855 157 0 51 chr20 45025331 45025497 -27128385 - AluJo SINE Alu -16 296 152 1857 102 147 0 chr20 45025497 45025763 -27128119 - AluSx SINE Alu -7 305 1 1855 157 0 51 chr20 45025763 45025908 -27127974 - AluJo SINE Alu -160 152 1 387 339 72 4 chr20 45026458 45026694 -27127188 + MIR SINE MIR 10 261 -1 338 241 126 0 chr20 45026806 45026893 -27126989 + MIR SINE MIR 75 172 -90 236 229 16 0 chr20 45027285 45027346 -27126536 + L2 LINE L2 2989 3050 -222 221 313 50 10 chr20 45027403 45027502 -27126380 + L2 LINE L2 3154 3256 -16 538 224 182 30 chr20 45027939 45028246 -27125636 + L1MC4 LINE L1 7391 7828 -96 2293 107 0 23 chr20 45028301 45028610 -27125272 + AluSq SINE Alu 1 302 -11 1078 183 26 136 chr20 45028644 45028983 -27124899 + AluJo SINE Alu 1 302 0 2497 64 0 3 chr20 45028985 45029281 -27124601 + AluY SINE Alu 17 311 0 830 130 69 0 chr20 45029298 45029429 -27124453 + FLAM_C SINE Alu 2 141 -2 369 266 102 16 chr20 45029462 45029590 -27124292 + L1ME LINE L1 5191 5329 -817 298 91 23 159 chr20 45029677 45029714 -27124168 + L1MA9 LINE L1 6237 6277 -35 2452 68 0 39 chr20 45029714 45030025 -27123857 - AluY SINE Alu -12 299 1 2043 140 7 3 chr20 45030026 45030319 -27123563 - AluSx SINE Alu -18 294 1 298 91 23 159 chr20 45030319 45030367 -27123515 + L1MA9 LINE L1 6276 6312 0 367 300 108 40 chr20 45030380 45030622 -27123260 + L1ME LINE L1 5409 5686 -435 2351 93 0 0 chr20 45030622 45030913 -27122969 + AluSc SINE Alu 1 291 -18 367 300 108 40 chr20 45030913 45031040 -27122842 + L1ME LINE L1 5686 5803 -318 2191 83 72 0 chr20 45031126 45031403 -27122479 + AluSp SINE Alu 1 297 -16 1007 112 12 59 chr20 45031611 45031780 -27122102 - AluSg/x SINE Alu -11 298 138 351 199 23 0 chr20 45031781 45031866 -27122016 - Alu SINE Alu -247 52 1 1161 190 28 0 chr20 45031866 45032077 -27121805 - AluJo SINE Alu -95 217 1 337 280 87 40 chr20 45032110 45032260 -27121622 + L1ME1 LINE L1 5629 5785 -2023 2057 122 13 26 chr20 45032306 45032609 -27121273 + AluSq SINE Alu 1 299 -14 21 0 0 0 chr20 45033151 45033172 -27120710 + AT_rich Low_complexity Low_complexity 1 21 0 33 20 0 20 chr20 45033271 45033293 -27120589 + AT_rich Low_complexity Low_complexity 1 22 -28 2519 73 0 0 chr20 45033293 45033596 -27120286 - AluY SINE Alu -8 303 1 33 20 0 20 chr20 45033596 45033624 -27120258 + AT_rich Low_complexity Low_complexity 22 50 0 1587 172 12 0 chr20 45033624 45033874 -27120008 - AluJb SINE Alu -55 257 5 1891 142 35 3 chr20 45034014 45034303 -27119579 + AluSx SINE Alu 5 302 -10 1947 149 7 3 chr20 45034316 45034604 -27119278 + AluSx SINE Alu 2 290 -22 743 216 75 10 chr20 45034619 45034818 -27119064 + L1ME1 LINE L1 5901 6112 -54 26 0 0 0 chr20 45034849 45034875 -27119007 + AT_rich Low_complexity Low_complexity 1 26 0 670 197 0 0 chr20 45034877 45034994 -27118888 - AluJb SINE Alu -194 118 2 295 299 119 0 chr20 45035503 45035637 -27118245 + MIR3 SINE MIR 41 190 -18 34 24 0 0 chr20 45035765 45035806 -27118076 + AT_rich Low_complexity Low_complexity 1 41 0 2116 121 7 10 chr20 45035806 45036103 -27117779 + AluSp SINE Alu 2 297 -16 307 152 0 0 chr20 45036114 45036160 -27117722 + Alu SINE Alu 1 46 -256 1222 133 0 0 chr20 45036161 45036334 -27117548 + AluSg/x SINE Alu 135 307 -3 26 0 0 0 chr20 45036334 45036360 -27117522 + AT_rich Low_complexity Low_complexity 1 26 0 200 280 112 56 chr20 45036535 45036660 -27117222 + MIR SINE MIR 104 235 -27 1167 61 0 0 chr20 45036763 45036894 -27116988 + AluSq/x SINE Alu 1 131 -182 2096 82 0 0 chr20 45037196 45037453 -27116429 + AluSx SINE Alu 56 312 0 316 289 107 25 chr20 45037586 45037745 -27116137 + LTR16A1 LTR ERVL 286 457 0 438 350 56 43 chr20 45037821 45038235 -27115647 - L2 LINE L2 -18 3254 2836 269 221 6 128 chr20 45038372 45038544 -27115338 + HAL1 LINE L1 27 177 -2330 2299 106 0 3 chr20 45038556 45038848 -27115034 + AluSq SINE Alu 1 291 -22 1239 181 161 4 chr20 45038904 45039152 -27114730 + AluJo SINE Alu 1 287 -15 2144 128 16 10 chr20 45039154 45039460 -27114422 + AluSg SINE Alu 3 310 0 2148 105 24 3 chr20 45039619 45039913 -27113969 - AluSx SINE Alu -12 300 1 256 337 48 48 chr20 45040202 45040368 -27113514 - MIR3 SINE MIR -38 170 5 2502 74 3 0 chr20 45041584 45041883 -27111999 - AluSp SINE Alu -5 308 9 1598 104 18 5 chr20 45041885 45042106 -27111776 - AluSg/x SINE Alu -23 289 66 2198 112 0 0 chr20 45042166 45042471 -27111411 + AluSq SINE Alu 1 305 0 2254 129 0 0 chr20 45042471 45042780 -27111102 - AluSp SINE Alu -2 311 3 1016 154 59 6 chr20 45042783 45042952 -27110930 - FRAM SINE Alu -3 173 1 829 139 0 0 chr20 45042983 45043112 -27110770 + FLAM_C SINE Alu 13 141 -2 2356 100 3 6 chr20 45043112 45043423 -27110459 + AluSg SINE Alu 1 310 0 1600 189 21 14 chr20 45043430 45043715 -27110167 + AluJb SINE Alu 11 297 -15 233 176 20 0 chr20 45043718 45043769 -27110113 + Alu SINE Alu 238 289 -11 2393 96 0 7 chr20 45043793 45044095 -27109787 + AluSg SINE Alu 1 300 -10 358 314 8 8 chr20 45044217 45044341 -27109541 + MIR SINE MIR 68 191 -71 914 244 56 26 chr20 45046520 45046786 -27107096 + L1ME1 LINE L1 5816 6089 -77 1011 181 46 119 chr20 45046831 45046854 -27107028 + L1MB2 LINE L1 5759 5782 -389 2295 94 10 19 chr20 45046854 45047161 -27106721 + AluSg SINE Alu 1 304 -6 1011 181 46 119 chr20 45047161 45047319 -27106563 + L1MB2 LINE L1 5782 5950 -221 2068 145 10 0 chr20 45047319 45047623 -27106259 + AluSx SINE Alu 1 307 -5 1011 181 46 119 chr20 45047623 45047721 -27106161 + L1MB2 LINE L1 5950 6054 -117 1651 160 24 14 chr20 45047721 45048009 -27105873 - AluJo SINE Alu -17 295 5 1011 181 46 119 chr20 45048009 45048027 -27105855 + L1MB2 LINE L1 6054 6072 -99 671 226 0 0 chr20 45048027 45048160 -27105722 - FLAM_C SINE Alu 0 133 1 1011 181 46 119 chr20 45048160 45048269 -27105613 + L1MB2 LINE L1 6072 6138 -33 2404 97 3 3 chr20 45048764 45049072 -27104810 - AluSq SINE Alu -5 308 1 234 91 0 0 chr20 45049295 45049328 -27104554 + (TTTC)n Simple_repeat Simple_repeat 1 33 0 6395 35 10 3 chr20 45049328 45050040 -27103842 - SVA Other Other -1 1385 669 204 278 72 41 chr20 45050425 45050522 -27103360 + L2 LINE L2 3161 3260 -12 730 128 45 30 chr20 45050603 45050736 -27103146 + FLAM_C SINE Alu 1 135 -8 1347 224 156 43 chr20 45050881 45051241 -27102641 + L1ME2 LINE L1 5537 5855 -309 1642 93 35 97 chr20 45051241 45051428 -27102454 + L1PA15 LINE L1 5866 6028 -137 2078 114 7 46 chr20 45051428 45051735 -27102147 + AluSx SINE Alu 1 295 -17 1642 93 35 97 chr20 45051735 45051858 -27102024 + L1PA15 LINE L1 6028 6157 -8 225 0 0 0 chr20 45051860 45051885 -27101997 + (CA)n Simple_repeat Simple_repeat 2 26 0 1347 224 156 43 chr20 45051885 45052035 -27101847 + L1ME2 LINE L1 5855 6108 -56 2237 106 17 0 chr20 45052041 45052333 -27101549 + AluSx SINE Alu 8 304 -8 1987 151 10 3 chr20 45052367 45052665 -27101217 + AluJo SINE Alu 1 300 -12 2101 105 40 20 chr20 45052815 45052953 -27100929 + AluSq SINE Alu 1 135 -178 2286 76 7 30 chr20 45052953 45053255 -27100627 + AluSg SINE Alu 1 295 -15 2101 105 40 20 chr20 45053255 45053412 -27100470 + AluSq SINE Alu 135 302 -11 2025 143 3 7 chr20 45053998 45054292 -27099590 - AluJo SINE Alu -19 293 1 2231 128 7 3 chr20 45054402 45054706 -27099176 + AluSx SINE Alu 1 305 -7 1621 188 16 20 chr20 45054879 45055183 -27098699 - AluJo SINE Alu -9 303 1 778 165 0 8 chr20 45055205 45055338 -27098544 - FLAM_C SINE Alu 0 133 2 2259 95 0 10 chr20 45055424 45055719 -27098163 - AluSg SINE Alu -18 292 1 2564 69 10 0 chr20 45055877 45056183 -27097699 + AluSp SINE Alu 1 309 -4 2270 90 3 29 chr20 45056191 45056501 -27097381 + AluSg SINE Alu 1 302 -8 1411 113 0 0 chr20 45056504 45056690 -27097192 + AluSg/x SINE Alu 125 310 0 225 312 13 13 chr20 45057402 45057479 -27096403 + L2 LINE L2 3195 3271 -1 1801 118 84 11 chr20 45057516 45057803 -27096079 - AluSg SINE Alu 0 306 1 316 231 26 0 chr20 45057900 45057978 -27095904 - MIR SINE MIR -106 156 77 1347 140 0 173 chr20 45058345 45058509 -27095373 + AluJb SINE Alu 2 70 -242 1536 138 115 4 chr20 45058509 45058762 -27095120 + AluSx SINE Alu 2 282 -30 1347 140 0 173 chr20 45058762 45058961 -27094921 + AluJb SINE Alu 70 302 -10 2453 69 0 7 chr20 45059147 45059452 -27094430 + AluSc SINE Alu 1 303 -6 181 185 74 0 chr20 45059570 45059624 -27094258 + MIR SINE MIR 19 76 -186 29 106 0 0 chr20 45060363 45060476 -27093406 + GC_rich Low_complexity Low_complexity 1 113 0 180 0 0 0 chr20 45060643 45060663 -27093219 + (CGGGG)n Simple_repeat Simple_repeat 5 24 0 1697 135 10 40 chr20 45060999 45061172 -27092710 - AluJo SINE Alu -3 309 147 2238 64 6 73 chr20 45061172 45061486 -27092396 - AluSc SINE Alu -10 299 7 1697 135 10 40 chr20 45061486 45061616 -27092266 - AluJo SINE Alu -165 147 15 207 343 46 9 chr20 45061827 45061935 -27091947 + L2 LINE L2 3123 3234 -38 1537 148 22 26 chr20 45062011 45062282 -27091600 + AluJo SINE Alu 12 281 -31 496 193 21 93 chr20 45062642 45062731 -27091151 + MIR SINE MIR 18 95 -167 2067 149 3 0 chr20 45062731 45063026 -27090856 - AluSx SINE Alu -16 296 1 496 193 21 93 chr20 45063026 45063076 -27090806 + MIR SINE MIR 95 147 -115 368 158 0 0 chr20 45063106 45063163 -27090719 - AluSg/x SINE Alu -117 185 129 964 193 64 0 chr20 45063178 45063365 -27090517 - MIR SINE MIR -56 206 8 340 225 25 0 chr20 45063361 45063441 -27090441 + MIR SINE MIR 160 241 -21 * 2232 104 3 3 chr20 45063446 45063733 -27090149 + AluSx SINE Alu 1 287 -25 1341 102 5 11 chr20 45063733 45063920 -27089962 - AluSx SINE Alu -125 187 2 1962 146 3 3 chr20 45064870 45065157 -27088725 + AluSx SINE Alu 1 287 -25 697 134 0 82 chr20 45065168 45065302 -27088580 + FLAM_C SINE Alu 3 125 -18 685 183 0 46 chr20 45065360 45065491 -27088391 + FLAM_C SINE Alu 2 126 -17 2188 83 13 20 chr20 45065724 45066024 -27087858 - AluSq SINE Alu -15 298 1 2050 165 0 0 chr20 45066147 45066456 -27087426 + AluSx SINE Alu 1 309 -3 352 122 0 0 chr20 45066557 45066606 -27087276 + FRAM SINE Alu 76 124 -42 536 172 13 133 chr20 45066608 45066759 -27087123 - AluJo SINE Alu -57 255 123 210 320 13 0 chr20 45066787 45066862 -27087020 - MIR SINE MIR -120 142 67 207 163 122 0 chr20 45067215 45067264 -27086618 + L2 LINE L2 2460 2514 -800 1117 152 47 0 chr20 45067264 45067475 -27086407 + L1ME1 LINE L1 5357 5577 -589 1894 123 3 48 chr20 45067475 45067791 -27086091 - AluSg SINE Alu 0 303 1 1204 151 26 21 chr20 45067797 45067820 -27086062 + AluSg/x SINE Alu 108 129 -181 2586 52 10 3 chr20 45067820 45068125 -27085757 + AluY SINE Alu 1 307 -4 1204 151 26 21 chr20 45068125 45068293 -27085589 + AluSg/x SINE Alu 129 300 -10 669 177 233 45 chr20 45068295 45068561 -27085321 + L1ME1 LINE L1 5596 5911 -255 1092 153 0 17 chr20 45068561 45068737 -27085145 - AluJb SINE Alu -6 306 134 2049 139 14 0 chr20 45068737 45069031 -27084851 - AluSx SINE Alu -14 298 1 1211 126 0 11 chr20 45069044 45069219 -27084663 + AluSg/x SINE Alu 123 295 -15 183 328 62 55 chr20 45070326 45070454 -27083428 + L2 LINE L2 3047 3175 -97 967 113 13 19 chr20 45070467 45070626 -27083256 - LTR8 LTR ERV1 -8 683 526 505 56 0 0 chr20 45070629 45070701 -27083181 - Alu SINE Alu -9 300 229 2510 48 3 0 chr20 45070836 45071146 -27082736 + AluY SINE Alu 2 312 0 420 251 211 34 chr20 45071202 45071394 -27082488 + L1MC5 LINE L1 7268 7425 -536 1868 168 0 25 chr20 45071394 45071709 -27082173 + AluJo SINE Alu 1 307 -5 420 251 211 34 chr20 45071709 45071871 -27082011 + L1MC5 LINE L1 7425 7685 -276 257 247 14 0 chr20 45071867 45071940 -27081942 + L1MC4 LINE L1 7830 7903 -139 * 2043 102 35 18 chr20 45071947 45072232 -27081650 + AluSg SINE Alu 1 290 -20 968 144 68 0 chr20 45072254 45072400 -27081482 + AluSg/x SINE Alu 145 300 -10 2413 98 0 0 chr20 45072419 45072716 -27081166 - AluSx SINE Alu -15 297 1 305 241 116 27 chr20 45072754 45072866 -27081016 + L1MC4 LINE L1 7894 8015 -27 2350 108 0 0 chr20 45072877 45073174 -27080708 - AluSx SINE Alu -15 297 1 192 200 20 80 chr20 45073517 45073567 -27080315 + MIR3 SINE MIR 114 160 -48 338 116 49 0 chr20 45073608 45073673 -27080209 - MLT1G3 LTR MaLR 0 555 486 679 162 0 0 chr20 45073675 45073774 -27080108 + AluJ/FLAM SINE Alu 2 100 -212 907 102 0 0 chr20 45073849 45073967 -27079915 - FLAM_C SINE Alu -25 118 1 33 0 0 0 chr20 45073978 45074011 -27079871 + AT_rich Low_complexity Low_complexity 1 33 0 2229 66 17 3 chr20 45074011 45074300 -27079582 - AluSp SINE Alu -20 293 1 2816 16 0 0 chr20 45074605 45074923 -27078959 - AluYb8 SINE Alu 0 318 1 252 0 0 0 chr20 45075145 45075173 -27078709 + (TC)n Simple_repeat Simple_repeat 2 29 0 225 0 0 0 chr20 45075172 45075197 -27078685 + (TA)n Simple_repeat Simple_repeat 1 25 0 * 2313 62 3 7 chr20 45075197 45075503 -27078379 - AluY SINE Alu -6 305 1 1120 129 0 50 chr20 45075517 45075701 -27078181 + AluJo SINE Alu 122 297 -15 2236 105 0 3 chr20 45075701 45076014 -27077868 + AluSx SINE Alu 1 312 0 1120 129 0 50 chr20 45076014 45076030 -27077852 + AluJo SINE Alu 297 312 0 1452 202 163 37 chr20 45076065 45076501 -27077381 - MLT1G3 LTR MaLR -39 491 1 247 254 142 62 chr20 45076857 45077035 -27076847 + L2 LINE L2 2196 2399 -915 2049 94 24 0 chr20 45077035 45077322 -27076560 - AluSq SINE Alu -19 294 1 247 254 142 62 chr20 45077322 45077383 -27076499 + L2 LINE L2 2399 2454 -860 424 146 22 0 chr20 45077577 45077666 -27076216 + CT-rich Low_complexity Low_complexity 4 94 0 876 189 23 6 chr20 45077915 45078090 -27075792 - AluJo SINE Alu -48 264 87 1130 98 57 122 chr20 45078102 45078208 -27075674 + MER30 DNA MER1_type 1 112 -118 2326 93 0 0 chr20 45078208 45078518 -27075364 + AluY SINE Alu 1 310 -1 1130 98 57 122 chr20 45078518 45078544 -27075338 + MER30 DNA MER1_type 112 138 -92 1620 134 16 84 chr20 45078544 45078716 -27075166 - AluSx SINE Alu -13 299 158 1956 135 7 0 chr20 45078716 45079012 -27074870 - AluSx SINE Alu -14 298 1 1620 134 16 84 chr20 45079012 45079160 -27074722 - AluSx SINE Alu -154 158 1 1130 98 57 122 chr20 45079160 45079191 -27074691 + MER30 DNA MER1_type 138 169 -61 2280 39 42 3 chr20 45079191 45079477 -27074405 + AluY SINE Alu 1 297 -14 1130 98 57 122 chr20 45079477 45079557 -27074325 + MER30 DNA MER1_type 169 230 0 2030 117 0 10 chr20 45079692 45079992 -27073890 - AluSc SINE Alu -12 297 1 2164 93 10 0 chr20 45080005 45080294 -27073588 - AluSx SINE Alu -20 292 1 263 277 43 43 chr20 45081142 45081236 -27072646 + L2 LINE L2 3133 3226 -46 542 280 137 36 chr20 45081385 45081421 -27072461 - L1ME4a LINE L1 0 6121 6090 2329 47 7 10 chr20 45081421 45081719 -27072163 - AluY SINE Alu -14 297 1 542 280 137 36 chr20 45081719 45081767 -27072115 - L1ME4a LINE L1 -31 6090 6048 1788 153 14 7 chr20 45081767 45082062 -27071820 - AluJb SINE Alu -15 297 1 542 280 137 36 chr20 45082062 45082076 -27071806 - L1ME4a LINE L1 -73 6048 6037 2139 84 0 27 chr20 45082076 45082375 -27071507 - AluY SINE Alu -20 291 1 542 280 137 36 chr20 45082375 45082534 -27071348 - L1ME4a LINE L1 -84 6037 5895 2099 104 21 0 chr20 45082534 45082822 -27071060 - AluSx SINE Alu -18 294 1 542 280 137 36 chr20 45082822 45082836 -27071046 - L1ME4a LINE L1 -226 5895 5884 2186 109 0 3 chr20 45082836 45083147 -27070735 - AluSg SINE Alu 0 310 1 542 280 137 36 chr20 45083147 45083424 -27070458 - L1ME4a LINE L1 -237 5884 5513 2061 98 3 29 chr20 45083520 45083827 -27070055 - AluSc SINE Alu -10 299 1 1113 264 12 68 chr20 45083857 45084143 -27069739 + L2 LINE L2 2835 3135 -178 2164 110 0 0 chr20 45084143 45084443 -27069439 - AluSx SINE Alu -12 300 1 221 53 53 0 chr20 45084445 45084483 -27069399 + T-rich Low_complexity Low_complexity 1 40 0 1982 118 7 0 chr20 45084483 45084762 -27069120 - AluSx SINE Alu -31 281 1 1113 264 12 68 chr20 45084762 45084899 -27068983 + L2 LINE L2 3134 3238 -75 1880 139 4 0 chr20 45085553 45085854 -27068028 + AluSx SINE Alu 1 302 0 2005 80 0 8 chr20 45085854 45086117 -27067765 + AluSg SINE Alu 2 262 -48 1983 81 3 65 chr20 45086117 45086449 -27067433 + AluSp SINE Alu 9 313 0 1850 146 20 3 chr20 45086592 45086893 -27066989 - AluJb SINE Alu -6 306 1 2152 112 0 16 chr20 45087160 45087472 -27066410 - AluSg SINE Alu -3 307 1 1582 158 50 7 chr20 45087472 45087751 -27066131 - AluJo SINE Alu -19 293 3 1278 215 16 32 chr20 45087787 45087966 -27065916 - AluJo SINE Alu -4 308 135 2245 82 3 0 chr20 45087966 45088258 -27065624 - AluSp SINE Alu -20 293 1 1278 215 16 32 chr20 45088258 45088389 -27065493 - AluJo SINE Alu -177 135 3 288 206 96 0 chr20 45088395 45088468 -27065414 - FLAM_A SINE Alu 0 133 54 291 205 156 41 chr20 45088478 45088600 -27065282 - L1ME LINE L1 -370 5751 5616 181 375 0 0 chr20 45088643 45088715 -27065167 + L2 LINE L2 3186 3257 -15 300 307 8 70 chr20 45088775 45089016 -27064866 - L1ME4a LINE L1 -187 5934 5709 649 128 0 0 chr20 45089036 45089122 -27064760 - FLAM_A SINE Alu -21 121 36 2066 125 0 0 chr20 45089156 45089453 -27064429 + AluSq SINE Alu 1 297 -16 2359 75 0 0 chr20 45090084 45090378 -27063504 + AluSq SINE Alu 1 294 -19 600 187 32 24 chr20 45091021 45091144 -27062738 + MER63 DNA MER1_type 1 750 -86 3918 62 23 37 chr20 45091832 45092050 -27061832 + L1PA13 LINE L1 5607 5827 -336 2030 106 3 23 chr20 45092050 45092351 -27061531 + AluSq SINE Alu 1 295 -18 3918 62 23 37 chr20 45092351 45092449 -27061433 + L1PA13 LINE L1 5827 5925 -238 2275 100 3 0 chr20 45092449 45092758 -27061124 - AluSg SINE Alu 0 310 1 3918 62 23 37 chr20 45092758 45093005 -27060877 + L1PA13 LINE L1 5925 6163 0 1421 191 0 44 chr20 45093467 45093765 -27060117 - AluJo SINE Alu -27 285 1 2273 102 0 0 chr20 45093914 45094219 -27059663 - AluSg SINE Alu -5 305 1 2319 61 3 3 chr20 45094293 45094586 -27059296 - AluSp SINE Alu -20 293 1 666 259 174 45 chr20 45094919 45095086 -27058796 - L2 LINE L2 -6 3307 3163 2306 87 0 0 chr20 45095086 45095386 -27058496 + AluSx SINE Alu 1 300 -12 666 259 174 45 chr20 45095386 45095422 -27058460 - L2 LINE L2 -150 3163 3133 2370 82 3 0 chr20 45095422 45095728 -27058154 + AluSp SINE Alu 1 307 -6 666 259 174 45 chr20 45095728 45095948 -27057934 - L2 LINE L2 -180 3133 2828 486 294 85 35 chr20 45096321 45096522 -27057360 - MIR SINE MIR -6 256 46 513 234 90 42 chr20 45097672 45097839 -27056043 + MIR SINE MIR 29 203 -59 201 329 185 7 chr20 45097909 45098055 -27055827 + MIR SINE MIR 74 245 -17 2324 80 0 0 chr20 45098075 45098386 -27055496 + AluY SINE Alu 1 311 0 987 295 89 16 chr20 45098518 45098780 -27055102 + L2 LINE L2 1075 1375 -1939 2249 78 0 14 chr20 45098780 45099076 -27054806 - AluSg SINE Alu -18 292 1 987 295 89 16 chr20 45099076 45099196 -27054686 + L2 LINE L2 1375 1485 -1829 1238 125 0 0 chr20 45099207 45099375 -27054507 + L1P3 LINE L1 644 811 -5650 2152 111 3 7 chr20 45099418 45099724 -27054158 + AluSx SINE Alu 1 305 -7 740 164 31 0 chr20 45099780 45099908 -27053974 + FLAM_C SINE Alu 1 132 -1 2172 247 45 38 chr20 45099936 45100453 -27053429 + L2 LINE L2 1565 2088 -1226 2066 119 0 10 chr20 45100453 45100765 -27053117 - AluSx SINE Alu -3 309 1 2172 247 45 38 chr20 45100765 45100898 -27052984 + L2 LINE L2 2088 2219 -1095 462 158 58 17 chr20 45100898 45101018 -27052864 - MER104 DNA Tc2 0 180 56 192 216 0 0 chr20 45101018 45101069 -27052813 + A-rich Low_complexity Low_complexity 1 51 0 1904 109 63 0 chr20 45101103 45101388 -27052494 + AluSq SINE Alu 3 305 -8 576 247 73 0 chr20 45101425 45101603 -27052279 + L2 LINE L2 2230 2420 -894 670 163 130 0 chr20 45101603 45101726 -27052156 - AluJb SINE Alu -6 306 168 1090 284 83 33 chr20 45101800 45102130 -27051752 + L2 LINE L2 2709 3082 -231 1911 135 10 0 chr20 45102130 45102418 -27051464 - AluSg SINE Alu -19 291 1 1090 284 83 33 chr20 45102418 45102663 -27051219 + L2 LINE L2 3082 3313 0 243 360 70 35 chr20 45102695 45102867 -27051015 - L2 LINE L2 -8 3264 3087 367 239 28 55 chr20 45103258 45103367 -27050515 + MER81 DNA DNA 4 109 -5 1314 271 86 27 chr20 45103934 45104166 -27049716 + L2 LINE L2 1098 1315 -1999 1641 169 24 10 chr20 45104166 45104456 -27049426 + AluJb SINE Alu 1 294 -18 1314 271 86 27 chr20 45104456 45104702 -27049180 + L2 LINE L2 1315 1604 -1710 310 279 34 55 chr20 45104787 45104914 -27048968 - L1MC4 LINE L1 -1337 6705 6583 351 167 26 0 chr20 45104914 45105028 -27048854 + (TA)n Simple_repeat Simple_repeat 1 117 0 2235 61 3 17 chr20 45105033 45105330 -27048552 - AluY SINE Alu -18 293 1 548 296 73 16 chr20 45105589 45105794 -27048088 + MIR SINE MIR 17 231 -31 283 232 54 62 chr20 45105768 45105880 -27048002 - MIR SINE MIR -30 232 122 * 2064 128 0 3 chr20 45105884 45106189 -27047693 + AluSx SINE Alu 1 304 -8 1883 142 7 0 chr20 45106981 45107270 -27046612 - AluSx SINE Alu -20 292 2 2232 95 3 0 chr20 45107431 45107736 -27046146 + AluSx SINE Alu 1 306 -6 210 338 86 7 chr20 45108037 45108188 -27045694 + L2 LINE L2 2546 2708 -606 312 336 134 13 chr20 45108395 45108544 -27045338 + L2 LINE L2 3106 3272 0 2220 89 3 7 chr20 45108864 45109166 -27044716 + AluSx SINE Alu 1 301 -11 969 146 67 0 chr20 45109268 45109432 -27044450 + FRAM SINE Alu 1 171 -5 1840 125 3 24 chr20 45109598 45109893 -27043989 + AluSx SINE Alu 1 289 -23 2112 126 0 0 chr20 45109903 45110205 -27043677 + AluSx SINE Alu 1 302 -10 592 321 96 27 chr20 45110451 45110617 -27043265 + L1ME4a LINE L1 5711 5864 -257 1722 165 28 0 chr20 45110617 45110908 -27042974 - AluJo SINE Alu -13 299 1 592 321 96 27 chr20 45110908 45111115 -27042767 + L1ME4a LINE L1 5864 6110 -11 2026 133 0 7 chr20 45111120 45111422 -27042460 - AluSx SINE Alu -12 300 1 1048 101 0 77 chr20 45111666 45111698 -27042184 - AluSq SINE Alu -158 155 122 2128 79 20 17 chr20 45111698 45111990 -27041892 - AluSc SINE Alu -16 293 1 1048 101 0 77 chr20 45111990 45112125 -27041757 - AluSq SINE Alu -191 122 1 1558 124 80 4 chr20 45112304 45112554 -27041328 + AluSx SINE Alu 1 269 -43 2142 112 0 0 chr20 45112554 45112847 -27041035 + AluSx SINE Alu 15 309 -3 21 57 0 0 chr20 45113101 45113136 -27040746 + AT_rich Low_complexity Low_complexity 1 35 0 2012 63 15 30 chr20 45113136 45113405 -27040477 + AluY SINE Alu 32 296 -15 1523 142 103 0 chr20 45113886 45114147 -27039735 - AluSx SINE Alu -24 288 1 1900 166 3 0 chr20 45114929 45115236 -27038646 - AluJb SINE Alu -4 308 1 2064 118 0 0 chr20 45115590 45115899 -27037983 - AluSq SINE Alu 0 309 1 1667 81 64 0 chr20 45115971 45116205 -27037677 + AluSq SINE Alu 63 311 -2 362 364 11 33 chr20 45116276 45116460 -27037422 - L2 LINE L2 -266 3006 2827 324 296 80 45 chr20 45116640 45116839 -27037043 - MIR SINE MIR -42 220 15 2302 74 0 19 chr20 45116886 45117195 -27036687 - AluY SINE Alu -8 303 1 1944 113 30 17 chr20 45117326 45117627 -27036255 - AluSx SINE Alu -5 307 3 249 57 0 0 chr20 45117659 45117694 -27036188 + (TTTAA)n Simple_repeat Simple_repeat 3 37 0 1114 110 0 18 chr20 45117694 45117847 -27036035 - AluSg/x SINE Alu -27 283 132 2209 94 0 10 chr20 45117847 45118156 -27035726 - AluSq SINE Alu -6 307 2 22 0 0 0 chr20 45118166 45118188 -27035694 + AT_rich Low_complexity Low_complexity 1 22 0 1673 169 7 20 chr20 45118392 45118693 -27035189 - AluJb SINE Alu -15 297 1 1835 125 3 31 chr20 45118703 45119022 -27034860 - AluSx SINE Alu 0 312 3 468 225 142 132 chr20 45119132 45119450 -27034432 + L1ME LINE L1 5297 5610 -511 10254 25 2 144 chr20 45119450 45121055 -27032827 + SVA Other Other 3 1380 -6 468 225 142 132 chr20 45121055 45121100 -27032782 + L1ME LINE L1 5610 5653 -468 2106 88 0 0 chr20 45121100 45121373 -27032509 + AluSx SINE Alu 28 300 -12 468 225 142 132 chr20 45121373 45121414 -27032468 + L1ME LINE L1 5653 5692 -429 1891 143 0 0 chr20 45121414 45121708 -27032174 - AluSx SINE Alu -18 294 1 468 225 142 132 chr20 45121708 45121726 -27032156 + L1ME LINE L1 5692 5708 -413 336 250 299 15 chr20 45121726 45121930 -27031952 + MIR SINE MIR 1 262 0 468 225 142 132 chr20 45121930 45122025 -27031857 + L1ME LINE L1 5708 5822 -299 1992 125 0 3 chr20 45122094 45122383 -27031499 - AluSx SINE Alu -24 288 1 773 153 0 0 chr20 45122724 45122835 -27031047 + AluJb SINE Alu 178 288 -24 1846 139 0 23 chr20 45123057 45123360 -27030522 - AluSx SINE Alu -16 296 1 213 281 62 42 chr20 45123516 45123612 -27030270 - MIR3 SINE MIR -2 206 109 621 194 36 65 chr20 45124170 45124309 -27029573 - MER20 DNA MER1_type -84 135 1 1880 138 0 4 chr20 45124879 45125148 -27028734 + AluSx SINE Alu 43 310 -2 2077 108 14 0 chr20 45125185 45125510 -27028372 + AluSx SINE Alu 1 312 0 225 315 55 71 chr20 45125621 45125748 -27028134 + L2 LINE L2 3139 3263 -9 1118 243 48 77 chr20 45126499 45126665 -27027217 + MER20B DNA MER1_type 103 272 -511 2052 126 17 0 chr20 45126665 45126958 -27026924 - AluSx SINE Alu -14 298 1 1118 243 48 77 chr20 45126958 45127072 -27026810 + MER20B DNA MER1_type 272 388 -395 2150 84 0 7 chr20 45127072 45127347 -27026535 + AluY SINE Alu 32 304 -7 1118 243 48 77 chr20 45127347 45127584 -27026298 + MER20B DNA MER1_type 388 606 -177 476 187 94 23 chr20 45127569 45127740 -27026142 + MER20B DNA MER1_type 545 727 -56 * 3796 141 10 63 chr20 45128852 45128931 -27024951 - L1MB2 LINE L1 0 6171 6089 2210 119 16 0 chr20 45128931 45129234 -27024648 - AluSx SINE Alu -4 308 1 3796 141 10 63 chr20 45129234 45129735 -27024147 - L1MB2 LINE L1 -82 6089 5635 2332 88 10 0 chr20 45129735 45130029 -27023853 - AluSx SINE Alu -9 303 7 3796 141 10 63 chr20 45130029 45130171 -27023711 - L1MB2 LINE L1 -536 5635 5487 2421 82 3 0 chr20 45130253 45130556 -27023326 - AluSp SINE Alu -8 305 2 2467 85 0 3 chr20 45130606 45130913 -27022969 + AluSg SINE Alu 1 306 -4 313 271 392 0 chr20 45130919 45131100 -27022782 - MIR SINE MIR -8 254 3 494 261 45 15 chr20 45131304 45131438 -27022444 - L3 LINE CR1 -8 1569 1432 1969 151 7 3 chr20 45131739 45132043 -27021839 - AluSx SINE Alu -7 305 1 1618 123 5 0 chr20 45132085 45132305 -27021577 - AluSg/x SINE Alu -16 296 76 * 2246 101 3 13 chr20 45132304 45132612 -27021270 - AluSg1 SINE Alu -4 305 1 635 64 0 0 chr20 45132613 45132691 -27021191 - AluSc SINE Alu -226 83 6 2359 107 0 0 chr20 45133320 45133619 -27020263 - AluSg SINE Alu -11 299 1 352 260 68 48 chr20 45133631 45133783 -27020099 - L1MC4a LINE L1 -1850 5958 5798 1866 170 20 7 chr20 45133783 45134083 -27019799 + AluJb SINE Alu 1 304 -8 352 260 68 48 chr20 45134083 45134180 -27019702 - L1MC4a LINE L1 -2010 5798 5704 401 290 145 36 chr20 45134257 45134510 -27019372 - L1MC4a LINE L1 -532 5589 5302 1543 192 39 26 chr20 45134510 45134818 -27019064 - AluJb SINE Alu 0 312 1 401 290 145 36 chr20 45134818 45134840 -27019042 - L1MC4a LINE L1 -819 5302 5284 1091 118 31 0 chr20 45135061 45135222 -27018660 - AluSg/x SINE Alu -15 295 130 1981 105 94 0 chr20 45135297 45135574 -27018308 - AluSx SINE Alu -9 303 1 661 214 0 0 chr20 45135761 45135887 -27017995 - FLAM_A SINE Alu -4 129 4 343 267 22 0 chr20 45137305 45137395 -27016487 - L2 LINE L2 -249 3023 2932 1892 138 0 17 chr20 45137685 45137981 -27015901 + AluJb SINE Alu 1 291 -21 1612 159 23 65 chr20 45138013 45138321 -27015561 + AluJo SINE Alu 1 295 -17 2140 84 0 60 chr20 45138551 45138850 -27015032 + AluSq SINE Alu 1 281 -32 367 277 40 85 chr20 45138873 45139007 -27014875 + MIR SINE MIR 20 158 -104 186 43 0 0 chr20 45139007 45139030 -27014852 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 2119 125 0 0 chr20 45139033 45139313 -27014569 - AluSg SINE Alu -30 280 1 367 277 40 85 chr20 45139313 45139398 -27014484 + MIR SINE MIR 160 233 -29 1896 125 62 7 chr20 45139980 45140269 -27013613 - AluSg SINE Alu -5 305 1 2506 73 3 0 chr20 45140399 45140701 -27013181 + AluSp SINE Alu 1 303 -10 644 289 40 13 chr20 45140987 45141212 -27012670 + MIR SINE MIR 8 238 -24 266 275 152 51 chr20 45141222 45141316 -27012566 - LTR67 LTR ERVL -34 523 440 2042 132 7 3 chr20 45141316 45141611 -27012271 + AluSx SINE Alu 1 296 -16 266 275 152 51 chr20 45141611 45141694 -27012188 - LTR67 LTR ERVL -117 440 328 319 217 17 150 chr20 45141805 45141985 -27011897 - LTR67 LTR ERVL -399 158 3 791 263 109 56 chr20 45142116 45142595 -27011287 + MLT1J LTR MaLR 7 510 -1 634 235 133 53 chr20 45143004 45143268 -27010614 - L2 LINE L2 -2 3311 3027 961 251 88 49 chr20 45143268 45143672 -27010210 + MLT1H LTR MaLR 14 485 -64 1500 191 31 17 chr20 45143672 45143960 -27009922 - AluJb SINE Alu -20 292 1 961 251 88 49 chr20 45143960 45144028 -27009854 + MLT1H LTR MaLR 485 549 0 2008 104 0 32 chr20 45144681 45144960 -27008922 + AluSx SINE Alu 31 300 -12 2289 132 0 0 chr20 45144960 45145270 -27008612 + AluSx SINE Alu 1 311 -1 1676 159 10 48 chr20 45145290 45145604 -27008278 + AluJb SINE Alu 1 302 -10 559 271 65 85 chr20 45145609 45145818 -27008064 + L1ME4a LINE L1 5393 5605 -516 2019 118 83 0 chr20 45145818 45146106 -27007776 + AluSx SINE Alu 1 312 0 559 271 65 85 chr20 45146106 45146472 -27007410 + L1ME4a LINE L1 5605 5977 -144 2462 64 0 0 chr20 45146472 45146790 -27007092 + AluY SINE Alu 1 318 0 559 271 65 85 chr20 45146790 45146898 -27006984 + L1ME4a LINE L1 5977 6065 -56 2150 148 0 0 chr20 45146898 45147201 -27006681 - AluSx SINE Alu -9 303 1 559 271 65 85 chr20 45147201 45147255 -27006627 + L1ME4a LINE L1 6065 6119 -2 348 260 93 27 chr20 45147420 45147570 -27006312 + MIR3 SINE MIR 47 206 -2 290 290 50 10 chr20 45147884 45147984 -27005898 - L2 LINE L2 0 3313 3210 2323 109 7 0 chr20 45148331 45148635 -27005247 + AluSx SINE Alu 1 306 -6 790 218 63 91 chr20 45148924 45149147 -27004735 - MIR SINE MIR -11 251 34 2112 125 0 14 chr20 45149147 45149444 -27004438 - AluSx SINE Alu -19 293 1 790 218 63 91 chr20 45149444 45149472 -27004410 - MIR SINE MIR -228 34 7 2301 101 0 3 chr20 45149702 45149998 -27003884 + AluSx SINE Alu 1 295 -17 2430 86 3 0 chr20 45149998 45150299 -27003583 + AluSc SINE Alu 1 302 -7 354 259 0 0 chr20 45150309 45150394 -27003488 + L2 LINE L2 2662 2746 -568 947 262 84 46 chr20 45150425 45150685 -27003197 + L2 LINE L2 2929 3209 -104 2144 122 3 7 chr20 45150685 45150988 -27002894 - AluSq SINE Alu -11 302 1 947 262 84 46 chr20 45150988 45151097 -27002785 + L2 LINE L2 3209 3312 -1 184 289 0 0 chr20 45152043 45152088 -27001794 + MIR SINE MIR 105 149 -113 2147 129 0 7 chr20 45152163 45152466 -27001416 - AluSx SINE Alu -11 301 1 186 259 19 19 chr20 45152771 45152825 -27001057 + MIR3 SINE MIR 111 164 -44 199 324 0 0 chr20 45152869 45152937 -27000945 - L2 LINE L2 -5 3267 3200 378 299 48 90 chr20 45152948 45153115 -27000767 + MER91A DNA MER1_type 1 160 -36 223 246 77 0 chr20 45153116 45153181 -27000701 + MER91A DNA MER1_type 127 196 0 225 320 125 31 chr20 45153528 45153656 -27000226 + MIR SINE MIR 82 221 -41 2482 82 0 0 chr20 45154137 45154440 -26999442 - AluSq SINE Alu -10 303 1 1415 162 18 49 chr20 45154653 45154945 -26998937 + MER33 DNA MER1_type 7 289 -2296 2434 97 0 3 chr20 45154945 45155253 -26998629 - AluSq SINE Alu -6 307 1 1415 162 18 49 chr20 45155253 45155288 -26998594 + MER33 DNA MER1_type 289 324 0 727 287 84 30 chr20 45156028 45156324 -26997558 + LTR16A LTR ERVL 139 450 0 278 352 14 14 chr20 45156363 45156508 -26997374 + (CATATA)n Simple_repeat Simple_repeat 2 146 0 366 23 0 0 chr20 45156539 45156582 -26997300 + (CA)n Simple_repeat Simple_repeat 1 43 0 612 294 77 23 chr20 45157230 45157451 -26996431 - MIR SINE MIR -10 252 20 480 291 28 21 chr20 45157890 45158031 -26995851 + MIR3 SINE MIR 21 162 -46 199 349 12 0 chr20 45158371 45158454 -26995428 + L2 LINE L2 2722 2805 -509 183 327 84 0 chr20 45158610 45158717 -26995165 + L2 LINE L2 2935 3050 -222 1958 133 42 0 chr20 45158876 45159162 -26994720 + AluSx SINE Alu 1 298 -14 738 164 0 0 chr20 45159182 45159292 -26994590 + FRAM SINE Alu 11 120 -56 182 329 24 12 chr20 45159309 45159394 -26994488 - MIR3 SINE MIR -30 178 93 195 42 0 0 chr20 45160727 45160751 -26993131 + (TCCC)n Simple_repeat Simple_repeat 3 26 0 343 269 134 0 chr20 45160781 45160915 -26992967 - MIR SINE MIR -70 192 41 307 290 116 32 chr20 45161491 45161646 -26992236 - MIR3 SINE MIR -7 201 34 464 275 11 6 chr20 45162862 45163040 -26990842 + (TG)n Simple_repeat Simple_repeat 2 180 0 195 222 0 0 chr20 45163132 45163177 -26990705 + (CGTG)n Simple_repeat Simple_repeat 3 47 0 2977 275 86 41 chr20 45164011 45164481 -26989401 + L2 LINE L2 1712 2160 -1153 2392 105 0 9 chr20 45164481 45164796 -26989086 - AluSx SINE Alu 0 312 1 2977 275 86 41 chr20 45164796 45164885 -26988997 + L2 LINE L2 2160 2244 -1069 2283 109 3 0 chr20 45164885 45165188 -26988694 - AluSx SINE Alu -8 304 1 2977 275 86 41 chr20 45165188 45165202 -26988680 + L2 LINE L2 2244 2256 -1057 2036 147 0 13 chr20 45165202 45165515 -26988367 - AluJb SINE Alu -3 309 1 2977 275 86 41 chr20 45165515 45165960 -26987922 + L2 LINE L2 2256 2680 -633 2533 73 3 0 chr20 45165960 45166260 -26987622 + AluSc SINE Alu 1 301 -8 2977 275 86 41 chr20 45166260 45166541 -26987341 + L2 LINE L2 2680 2947 -366 417 185 206 0 chr20 45166541 45166633 -26987249 + MER81 DNA DNA 3 113 -1 2977 275 86 41 chr20 45166633 45166854 -26987028 + L2 LINE L2 2947 3313 0 507 274 63 79 chr20 45166864 45167131 -26986751 + L1ME4a LINE L1 5771 6034 -87 2427 94 0 0 chr20 45167131 45167430 -26986452 - AluSx SINE Alu -13 299 1 507 274 63 79 chr20 45167430 45167465 -26986417 + L1ME4a LINE L1 6034 6068 -53 615 277 57 0 chr20 45168033 45168192 -26985690 - MIR SINE MIR -70 192 25 235 162 0 59 chr20 45168320 45168388 -26985494 + GA-rich Low_complexity Low_complexity 1 64 0 294 274 35 53 chr20 45168809 45168922 -26984960 + MIR3 SINE MIR 76 186 -22 204 313 50 10 chr20 45168908 45169007 -26984875 + L2 LINE L2 2976 3078 -194 * 2516 67 3 0 chr20 45169374 45169673 -26984209 - AluY SINE Alu -11 300 1 425 310 123 75 chr20 45170131 45170229 -26983653 - L1ME4a LINE L1 -53 6068 5976 2426 91 0 0 chr20 45170229 45170526 -26983356 + AluY SINE Alu 1 297 -14 425 310 123 75 chr20 45170526 45170962 -26982920 - L1ME4a LINE L1 -145 5976 5508 415 235 23 30 chr20 45171470 45171602 -26982280 - HAL1 LINE L1 -129 2378 2248 22 56 0 0 chr20 45171682 45171718 -26982164 + AT_rich Low_complexity Low_complexity 1 36 0 234 273 67 83 chr20 45171726 45171904 -26981978 - HAL1 LINE L1 -522 1985 1811 1923 110 36 7 chr20 45171904 45172185 -26981697 - AluSx SINE Alu -14 298 10 234 273 67 83 chr20 45172185 45172259 -26981623 - HAL1 LINE L1 -696 1811 1737 3770 177 57 57 chr20 45172269 45172553 -26981329 - L1MB4 LINE L1 -3 6177 5894 2378 81 0 3 chr20 45172553 45172848 -26981034 - AluSg SINE Alu -16 294 1 3770 177 57 57 chr20 45172848 45173588 -26980294 - L1MB4 LINE L1 -286 5894 5155 2384 75 3 3 chr20 45173588 45173881 -26980001 - AluSc SINE Alu -16 293 1 3770 177 57 57 chr20 45173881 45174187 -26979695 - L1MB4 LINE L1 -1025 5155 4853 2650 50 0 0 chr20 45174187 45174487 -26979395 + AluY SINE Alu 1 300 -11 3770 177 57 57 chr20 45174487 45174583 -26979299 - L1MB4 LINE L1 -1327 4853 4758 355 152 45 0 chr20 45174583 45174649 -26979233 + AluSp/q SINE Alu 235 303 0 1127 191 9 34 chr20 45174681 45175006 -26978876 - L1MB4 LINE L1 -1429 4717 4401 737 219 13 29 chr20 45174982 45175086 -26978796 - HAL1 LINE L1 -1241 1266 1162 * 2440 103 0 0 chr20 45175086 45175396 -26978486 - AluSg SINE Alu 0 310 1 737 219 13 29 chr20 45175396 45175529 -26978353 - HAL1 LINE L1 -1345 1162 1033 317 354 70 28 chr20 45175550 45175765 -26978117 - L2 LINE L2 -1761 1553 1330 225 373 55 0 chr20 45175918 45176028 -26977854 - L2 LINE L2 -2190 1124 1009 1461 158 31 46 chr20 45176140 45176400 -26977482 - AluJo SINE Alu -56 256 1 21 0 0 0 chr20 45176401 45176422 -26977460 + AT_rich Low_complexity Low_complexity 1 21 0 318 50 0 0 chr20 45177892 45177932 -26975950 + (CA)n Simple_repeat Simple_repeat 1 40 0 321 335 0 43 chr20 45179549 45179734 -26974148 + G-rich Low_complexity Low_complexity 1 177 0 * 341 308 24 24 chr20 45179598 45179767 -26974115 + GA-rich Low_complexity Low_complexity 3 171 0 194 98 49 0 chr20 45180047 45180088 -26973794 + (CAGAGA)n Simple_repeat Simple_repeat 3 45 0 1058 264 84 38 chr20 45180090 45180243 -26973639 + L1MC5 LINE L1 7303 7447 -514 2775 23 0 0 chr20 45180243 45180544 -26973338 + AluY SINE Alu 1 301 -10 1058 264 84 38 chr20 45180544 45180924 -26972958 + L1MC5 LINE L1 7447 7861 -100 750 250 20 10 chr20 45181084 45181284 -26972598 - MIR SINE MIR -10 252 51 1665 133 4 0 chr20 45182266 45182500 -26971382 - AluSx SINE Alu -14 298 64 2104 125 10 6 chr20 45182652 45182963 -26970919 - AluSx SINE Alu 0 312 1 303 291 79 8 chr20 45183637 45183764 -26970118 + L2 LINE L2 3133 3268 -4 1102 295 146 23 chr20 45184226 45184700 -26969182 + L3 LINE CR1 492 1023 -554 1232 185 89 17 chr20 45184705 45185007 -26968875 + L1ME2 LINE L1 5732 6055 -109 210 71 0 0 chr20 45185007 45185035 -26968847 + (T)n Simple_repeat Simple_repeat 1 28 0 278 300 42 0 chr20 45185067 45185187 -26968695 + L1ME2 LINE L1 6038 6162 -2 191 391 58 16 chr20 45185194 45185383 -26968499 + L3 LINE CR1 1020 1216 -361 2253 120 3 0 chr20 45185419 45185718 -26968164 - AluSx SINE Alu -12 300 1 719 205 84 25 chr20 45185867 45186186 -26967696 + Tigger3(Golem) DNA MER2_type 1 3029 0 362 274 132 74 chr20 45186188 45186378 -26967504 - MIR SINE MIR -42 220 20 626 230 137 25 chr20 45189612 45189816 -26964066 - MIR SINE MIR -34 228 2 207 216 95 54 chr20 45189919 45189993 -26963889 - L2 LINE L2 -3 3269 3193 2173 140 10 49 chr20 45190042 45190448 -26963434 + MLT1B LTR MaLR 1 390 0 610 289 57 9 chr20 45190520 45190731 -26963151 + MIR SINE MIR 35 255 -7 368 260 19 10 chr20 45190788 45190892 -26962990 - MIR SINE MIR -127 135 31 314 276 60 26 chr20 45193039 45193155 -26960727 - MIR SINE MIR -109 153 34 234 355 65 0 chr20 45195363 45195456 -26958426 - MIR SINE MIR -150 112 14 1889 145 3 30 chr20 45195598 45195901 -26957981 - AluJo SINE Alu -17 295 1 2276 108 0 7 chr20 45195919 45196215 -26957667 - AluSq SINE Alu -19 294 1 458 322 95 23 chr20 45197675 45198023 -26955859 + L2 LINE L2 2821 3193 -79 2488 98 0 0 chr20 45199454 45199760 -26954122 + AluSx SINE Alu 1 306 -6 1243 125 0 0 chr20 45199760 45199928 -26953954 + AluSg/x SINE Alu 134 301 -11 232 246 0 29 chr20 45200037 45200106 -26953776 + (CA)n Simple_repeat Simple_repeat 1 67 0 223 296 148 0 chr20 45200392 45200473 -26953409 + MIR SINE MIR 112 204 -58 2024 126 44 0 chr20 45200675 45200969 -26952913 - AluSx SINE Alu -5 307 1 195 337 11 34 chr20 45201814 45201903 -26951979 - MIR SINE MIR -50 212 126 521 239 23 124 chr20 45202073 45202291 -26951591 + MER91A DNA MER1_type 1 196 0 384 322 125 33 chr20 45202373 45202677 -26951205 + L2 LINE L2 2333 2664 -650 184 361 0 10 chr20 45202845 45202942 -26950940 + L2 LINE L2 2924 3019 -253 * 231 328 15 0 chr20 45202940 45203007 -26950875 + L2 LINE L2 3240 3307 -6 261 83 0 0 chr20 45203013 45203049 -26950833 + (TGGA)n Simple_repeat Simple_repeat 2 37 0 409 313 62 14 chr20 45203153 45203297 -26950585 + L2 LINE L2 3114 3264 -8 323 228 63 79 chr20 45203297 45203486 -26950396 + L1M4 LINE L1 2933 3118 -3028 513 161 0 85 chr20 45203555 45203632 -26950250 + FLAM_C SINE Alu 36 101 -211 2104 84 8 4 chr20 45203632 45203895 -26949987 - AluSx SINE Alu -8 304 41 513 161 0 85 chr20 45203895 45203935 -26949947 + FLAM_C SINE Alu 101 143 -169 2162 122 6 19 chr20 45204514 45204826 -26949056 - AluSx SINE Alu -4 308 1 180 0 0 0 chr20 45204846 45204866 -26949016 + (A)n Simple_repeat Simple_repeat 1 20 0 2015 160 3 3 chr20 45204875 45205187 -26948695 + AluSx SINE Alu 1 312 0 2307 91 0 3 chr20 45205285 45205572 -26948310 - AluSc SINE Alu -23 286 1 798 188 0 0 chr20 45205795 45205928 -26947954 + FLAM_A SINE Alu 1 133 0 4400 141 65 11 chr20 45206906 45207731 -26946151 + L1MB8 LINE L1 5308 6177 -1 256 196 72 31 chr20 45207756 45207853 -26946029 + L1M4 LINE L1 5106 5206 -940 821 216 7 0 chr20 45207859 45207998 -26945884 + FAM SINE Alu 18 157 -28 2360 92 3 0 chr20 45207998 45208292 -26945590 - AluSp SINE Alu -18 295 1 1983 136 0 0 chr20 45208292 45208571 -26945311 - AluJb SINE Alu -12 300 22 2150 102 3 62 chr20 45208595 45208920 -26944962 - AluSg SINE Alu -4 306 1 738 151 34 0 chr20 45208943 45209062 -26944820 + Tigger7 DNA MER2_type 2368 2490 -1 330 304 11 0 chr20 45209985 45210077 -26943805 - L2 LINE L2 0 3272 3180 728 228 74 0 chr20 45210081 45210243 -26943639 + FAM SINE Alu 2 175 0 2064 133 17 0 chr20 45210253 45210547 -26943335 + AluSx SINE Alu 1 299 -13 1736 152 3 58 chr20 45210550 45210880 -26943002 + AluJo SINE Alu 1 312 0 22 35 0 0 chr20 45213590 45213619 -26940263 + GC_rich Low_complexity Low_complexity 1 29 0 1116 122 14 72 chr20 45214963 45215141 -26938741 + MER3 DNA MER1_type 1 165 -44 727 186 0 0 chr20 45215141 45215270 -26938612 + FLAM_A SINE Alu 5 133 0 1116 122 14 72 chr20 45215270 45215313 -26938569 + MER3 DNA MER1_type 165 209 0 1241 252 84 35 chr20 45215334 45215846 -26938036 + L2 LINE L2 2512 3076 -237 2298 100 3 0 chr20 45215846 45216147 -26937735 - AluSx SINE Alu -10 302 1 1241 252 84 35 chr20 45216147 45216384 -26937498 + L2 LINE L2 3076 3300 -13 1166 99 0 50 chr20 45216434 45216615 -26937267 + AluSg/x SINE Alu 139 310 0 1938 161 3 20 chr20 45216624 45216928 -26936954 + AluJo SINE Alu 1 299 -13 2241 118 0 37 chr20 45216930 45217252 -26936630 + AluSx SINE Alu 1 310 -2 1115 97 0 7 chr20 45217347 45217491 -26936391 + AluJb SINE Alu 1 143 -169 1975 121 37 4 chr20 45217492 45217785 -26936097 + AluSx SINE Alu 1 302 0 264 287 148 0 chr20 45217952 45218053 -26935829 - L2 LINE L2 -26 3287 3172 * 437 252 9 146 chr20 45218035 45218120 -26935762 - L2 LINE L2 -1037 2277 2182 1847 153 0 7 chr20 45218120 45218402 -26935480 + AluJb SINE Alu 1 280 -32 437 252 9 146 chr20 45218402 45218638 -26935244 - L2 LINE L2 -1132 2182 2000 1018 246 98 21 chr20 45218638 45218975 -26934907 + LTR16A LTR ERVL 88 450 0 307 194 104 0 chr20 45218975 45219042 -26934840 + L2 LINE L2 3196 3269 -3 408 233 107 0 chr20 45220807 45220910 -26932972 + L2 LINE L2 3200 3313 0 1864 140 0 31 chr20 45221565 45221858 -26932024 + AluJo SINE Alu 12 295 -17 1761 170 13 39 chr20 45222220 45222320 -26931562 + AluJo SINE Alu 2 103 -209 3681 170 60 34 chr20 45222320 45223085 -26930797 - LTR1 LTR ERV1 0 785 1 1761 170 13 39 chr20 45223085 45223296 -26930586 + AluJo SINE Alu 103 305 -7 791 128 0 0 chr20 45223500 45223617 -26930265 - FLAM_C SINE Alu -15 118 2 2405 90 0 3 chr20 45223716 45224015 -26929867 + AluY SINE Alu 1 298 -13 571 283 69 75 chr20 45224017 45224245 -26929637 + L1MEd LINE L1 107 334 -5785 1822 156 56 0 chr20 45224245 45224533 -26929349 + AluJo SINE Alu 1 304 -8 571 283 69 75 chr20 45224533 45224636 -26929246 + L1MEd LINE L1 334 436 -5683 373 319 14 14 chr20 45224869 45225010 -26928872 + L1MEd LINE L1 689 829 -5290 794 173 0 0 chr20 45225010 45225143 -26928739 + FLAM_C SINE Alu 1 133 0 448 161 102 0 chr20 45225158 45225270 -26928612 + L1M3 LINE L1 5457 5586 -582 2181 121 0 0 chr20 45225407 45225697 -26928185 + AluSg SINE Alu 1 290 -20 458 246 24 8 chr20 45225714 45225840 -26928042 + L1MEc LINE L1 37 164 -6232 877 191 11 21 chr20 45225842 45225868 -26928014 - AluJo SINE Alu -9 303 278 2212 103 17 98 chr20 45225868 45225919 -26927963 - THE1C LTR MaLR 0 375 321 2134 122 0 0 chr20 45225919 45226222 -26927660 - AluSg SINE Alu -6 304 2 2212 103 17 98 chr20 45226222 45226412 -26927470 - THE1C LTR MaLR -54 321 178 2405 59 3 3 chr20 45226412 45226716 -26927166 + AluY SINE Alu 1 304 -7 2212 103 17 98 chr20 45226716 45226881 -26927001 - THE1C LTR MaLR -197 178 1 877 191 11 21 chr20 45226881 45227042 -26926840 - AluJo SINE Alu -34 278 118 2143 98 3 0 chr20 45227047 45227334 -26926548 - AluSg SINE Alu -22 288 1 21 0 0 0 chr20 45227344 45227365 -26926517 + AT_rich Low_complexity Low_complexity 1 21 0 2225 205 118 74 chr20 45227452 45227990 -26925892 + L1MEc LINE L1 257 770 -5626 1296 152 127 69 chr20 45227990 45228126 -26925756 + AluJo SINE Alu 2 129 -173 1738 148 4 4 chr20 45228126 45228404 -26925478 + AluJb SINE Alu 1 278 -34 369 0 0 0 chr20 45228409 45228450 -26925432 + (TAA)n Simple_repeat Simple_repeat 2 42 0 1296 152 127 69 chr20 45228450 45228583 -26925299 + AluJo SINE Alu 132 293 -9 2225 205 118 74 chr20 45228583 45228740 -26925142 + L1MEc LINE L1 770 919 -5477 2276 85 0 0 chr20 45228740 45229033 -26924849 - AluY SINE Alu -18 293 1 1977 119 17 7 chr20 45229042 45229335 -26924547 + AluSx SINE Alu 1 296 -16 2225 205 118 74 chr20 45229335 45229413 -26924469 + L1MEc LINE L1 926 1076 -5320 1173 171 82 14 chr20 45229415 45229708 -26924174 + L1MC3 LINE L1 6824 7136 -649 1043 163 47 11 chr20 45229709 45229899 -26923983 - MSTD LTR MaLR 0 396 200 819 182 18 73 chr20 45229915 45229949 -26923933 - FAM SINE Alu -143 42 136 1928 110 23 33 chr20 45229949 45230250 -26923632 + AluSx SINE Alu 1 298 -14 819 182 18 73 chr20 45230250 45230380 -26923502 - FAM SINE Alu -48 137 1 813 214 58 0 chr20 45230410 45230583 -26923299 - MSTD LTR MaLR -213 183 1 490 141 0 54 chr20 45230583 45230675 -26923207 + L1MC3 LINE L1 7133 7219 -566 2072 189 30 84 chr20 45230928 45230997 -26922885 - MLT1D LTR MaLR 0 505 434 2332 83 0 0 chr20 45230997 45231298 -26922584 - AluY SINE Alu -10 301 1 2072 189 30 84 chr20 45231298 45231762 -26922120 - MLT1D LTR MaLR -71 434 1 2348 172 33 79 chr20 45231782 45232363 -26921519 + MLT2B3 LTR ERVL 1 554 0 4119 67 13 9 chr20 45232680 45233076 -26920806 + MER41A LTR ERV1 14 414 -140 2236 97 7 0 chr20 45233076 45233386 -26920496 - AluSx SINE Alu 0 312 1 4119 67 13 9 chr20 45233386 45233528 -26920354 + MER41A LTR ERV1 414 554 0 1615 199 7 0 chr20 45234030 45234332 -26919550 - AluJo SINE Alu -4 308 5 274 265 117 48 chr20 45234443 45234621 -26919261 - MIR SINE MIR -45 217 16 1951 111 7 7 chr20 45234850 45235170 -26918712 + AluSq SINE Alu 1 313 0 1747 210 18 15 chr20 45235180 45235571 -26918311 - MER90 LTR ERV1 -153 461 70 1485 204 130 25 chr20 45235598 45235637 -26918245 - LTR54B LTR ERV1 -4 494 460 1932 140 10 0 chr20 45235637 45235930 -26917952 + AluSx SINE Alu 1 296 -16 2481 56 0 0 chr20 45235932 45236234 -26917648 + AluY SINE Alu 1 302 -9 1485 204 130 25 chr20 45236234 45236638 -26917244 - LTR54B LTR ERV1 -38 460 1 2098 123 7 0 chr20 45236899 45237207 -26916675 + AluSx SINE Alu 3 312 0 1904 127 64 105 chr20 45237261 45237586 -26916296 + MER57A LTR ERV1 1 307 -96 750 118 118 0 chr20 45237586 45237705 -26916177 - FLAM_C SINE Alu 0 133 1 1904 127 64 105 chr20 45237705 45237798 -26916084 + MER57A LTR ERV1 307 402 -1 1055 249 20 10 chr20 45237836 45238130 -26915752 + MER57A-int LTR ERV1 3 391 -7146 971 186 6 0 chr20 45238142 45238314 -26915568 + LTR1B LTR ERV1 654 826 0 625 114 74 126 chr20 45238314 45238354 -26915528 + MER57A-int LTR ERV1 638 679 -6858 2407 69 3 0 chr20 45238354 45238660 -26915222 + AluY SINE Alu 1 307 -4 625 114 74 126 chr20 45238660 45238794 -26915088 + MER57A-int LTR ERV1 679 803 -6734 1626 144 8 4 chr20 45238804 45239060 -26914822 + AluSx SINE Alu 20 276 -36 27 29 0 0 chr20 45239077 45239111 -26914771 + AT_rich Low_complexity Low_complexity 1 34 0 2308 111 73 14 chr20 45239135 45239479 -26914403 + THE1B LTR MaLR 1 364 0 12248 84 8 0 chr20 45239479 45241047 -26912835 + THE1B-int LTR MaLR 1 1580 0 2264 112 85 15 chr20 45241047 45241387 -26912495 + THE1B LTR MaLR 1 364 0 881 125 0 22 chr20 45241452 45241588 -26912294 + FLAM_C SINE Alu 1 133 0 195 42 0 0 chr20 45241706 45241730 -26912152 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 350 254 0 27 chr20 45241758 45241868 -26912014 + MER57A-int LTR ERV1 884 990 -4133 583 258 143 29 chr20 45241870 45242114 -26911768 + MER34C LTR ERV1 159 430 -155 198 0 0 0 chr20 45242137 45242159 -26911723 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 1968 125 7 0 chr20 45242161 45242448 -26911434 - AluSq SINE Alu -24 289 1 316 271 42 0 chr20 45242449 45242545 -26911337 + MER57A-int LTR ERV1 1091 1190 -3681 1705 161 3 11 chr20 45242545 45242860 -26911022 - AluJb SINE Alu 0 313 1 1275 160 15 45 chr20 45242962 45243231 -26910651 + MER57A-int LTR ERV1 3081 3341 -2990 465 245 0 0 chr20 45243283 45243385 -26910497 + MER57A-int LTR ERV1 3345 3446 -2885 410 208 68 39 chr20 45243508 45243715 -26910167 + MER57A-int LTR ERV1 1709 1921 -3015 847 167 0 0 chr20 45243719 45243857 -26910025 + AluJo SINE Alu 1 138 -174 1702 187 3 0 chr20 45243914 45244208 -26909674 - AluJb SINE Alu -17 295 1 1508 163 78 96 chr20 45244208 45244656 -26909226 + MER57A-int LTR ERV1 3851 4292 -2039 624 176 66 29 chr20 45244657 45244793 -26909089 + FLAM_C SINE Alu 2 142 -1 4705 154 19 82 chr20 45244795 45244887 -26908995 + MER57A-int LTR ERV1 4835 4931 -2606 225 0 0 0 chr20 45244887 45244912 -26908970 + (TG)n Simple_repeat Simple_repeat 2 26 0 4705 154 19 82 chr20 45244912 45245091 -26908791 + MER57A-int LTR ERV1 4931 5120 -2417 1583 160 59 10 chr20 45245091 45245379 -26908503 + AluJb SINE Alu 6 307 -5 4705 154 19 82 chr20 45245379 45246160 -26907722 + MER57A-int LTR ERV1 5120 5821 -1716 240 111 0 0 chr20 45246479 45246515 -26907367 + (TTTC)n Simple_repeat Simple_repeat 2 37 0 1885 152 0 16 chr20 45246522 45246837 -26907045 - AluJb SINE Alu -2 310 1 3430 182 22 18 chr20 45246855 45247480 -26906402 + MER57A-int LTR ERV1 5825 6452 -1085 3583 139 2 6 chr20 45247606 45248140 -26905742 + MER50 LTR ERV1 73 604 -130 1417 137 0 99 chr20 45248156 45248350 -26905532 + MER57A-int LTR ERV1 6431 6590 -947 1593 149 45 15 chr20 45248350 45248618 -26905264 + AluJo SINE Alu 14 289 -23 1417 137 0 99 chr20 45248618 45248707 -26905175 + MER57A-int LTR ERV1 6590 6686 -851 378 0 0 0 chr20 45248770 45248816 -26905066 - L1PA3 LINE L1 -3 6152 6107 2147 187 43 45 chr20 45248816 45249286 -26904596 + MER57A-int LTR ERV1 6678 7146 -391 529 170 82 81 chr20 45249286 45249509 -26904373 + LTR54B LTR ERV1 3 239 -271 639 148 148 16 chr20 45249528 45249650 -26904232 + MER57A-int LTR ERV1 7399 7536 -1 2393 155 34 0 chr20 45249651 45250039 -26903843 + MER57A LTR ERV1 1 401 -2 1345 165 121 18 chr20 45250051 45250323 -26903559 + AluJb SINE Alu 1 300 -12 4454 142 54 26 chr20 45250848 45251059 -26902823 + MER6 DNA MER2_type 1 205 -660 204 40 0 0 chr20 45251059 45251084 -26902798 + (TG)n Simple_repeat Simple_repeat 1 25 0 4454 142 54 26 chr20 45251084 45251633 -26902249 + MER6 DNA MER2_type 205 782 -83 956 176 0 41 chr20 45251646 45251816 -26902066 - FRAM SINE Alu 0 166 4 23 0 0 0 chr20 45251820 45251843 -26902039 + AT_rich Low_complexity Low_complexity 1 23 0 1151 135 22 0 chr20 45251908 45252093 -26901789 - AluSg/x SINE Alu -12 300 112 1972 123 20 0 chr20 45252313 45252613 -26901269 - AluSg SINE Alu -4 306 1 718 210 0 29 chr20 45252695 45252833 -26901049 + AluJo SINE Alu 1 134 -178 1538 158 153 14 chr20 45252888 45253254 -26900628 + MER31B LTR ERV1 35 451 -15 266 253 40 10 chr20 45253305 45253348 -26900534 + CT-rich Low_complexity Low_complexity 3 43 -61 903 99 23 15 chr20 45253348 45253479 -26900403 - FLAM_C SINE Alu -1 132 1 266 253 40 10 chr20 45253479 45253534 -26900348 + CT-rich Low_complexity Low_complexity 43 104 0 895 153 54 64 chr20 45253535 45253654 -26900228 + LTR54 LTR ERV1 1 119 -391 2223 100 0 10 chr20 45253654 45253964 -26899918 - AluSq SINE Alu -6 307 1 895 153 54 64 chr20 45253964 45254047 -26899835 + LTR54 LTR ERV1 119 201 -309 995 141 32 0 chr20 45254054 45254210 -26899672 - AluJo SINE Alu -146 166 6 1953 88 22 4 chr20 45254230 45254503 -26899379 + LTR35 LTR ERV1 150 427 -191 25 0 0 0 chr20 45254503 45254528 -26899354 + AT_rich Low_complexity Low_complexity 1 25 0 892 66 0 0 chr20 45254528 45254634 -26899248 - U6 snRNA snRNA -1 106 1 476 263 156 49 chr20 45254706 45255123 -26898759 - LTR33 LTR ERVL -9 512 8 299 215 118 21 chr20 45255176 45255269 -26898613 + MIR SINE MIR 82 183 -79 315 233 79 72 chr20 45255294 45255556 -26898326 - MLT1H LTR MaLR -1 548 190 247 214 0 18 chr20 45255560 45255616 -26898266 - MLT1D LTR MaLR 0 467 413 2309 67 3 0 chr20 45255617 45255917 -26897965 - AluY SINE Alu -10 301 1 306 89 0 0 chr20 45255926 45255971 -26897911 - MADE1 DNA Mariner -35 45 1 * 1211 149 145 158 chr20 45255971 45256424 -26897458 - MLT1D LTR MaLR -56 449 3 2093 113 0 0 chr20 45256548 45256848 -26897034 - AluSx SINE Alu -12 300 1 321 312 52 56 chr20 45257282 45257397 -26896485 + L3 LINE CR1 1000 1114 -463 2441 56 0 7 chr20 45257397 45257700 -26896182 + AluY SINE Alu 2 302 -9 321 312 52 56 chr20 45257700 45257815 -26896067 + L3 LINE CR1 1114 1229 -348 967 202 81 8 chr20 45257866 45258135 -26895747 + L1MC5 LINE L1 6619 6954 -1041 1935 156 0 0 chr20 45258155 45258457 -26895425 + AluJb SINE Alu 1 302 -10 235 208 0 0 chr20 45258516 45258569 -26895313 + L1MC5 LINE L1 7187 7239 -722 410 181 133 67 chr20 45258577 45258682 -26895200 - FLAM_C SINE Alu -28 115 4 1818 139 10 7 chr20 45258693 45258996 -26894886 - AluJb SINE Alu -8 304 1 420 147 40 0 chr20 45259026 45259101 -26894781 + L1PB4 LINE L1 6059 6136 -20 353 280 11 21 chr20 45259146 45259223 -26894659 - MER5A DNA MER1_type -1 188 111 1836 125 30 10 chr20 45259223 45259519 -26894363 - AluSx SINE Alu -10 302 1 353 280 11 21 chr20 45259519 45259534 -26894348 - MER5A DNA MER1_type -78 111 97 253 91 0 23 chr20 45259555 45259599 -26894283 + Alu SINE Alu 256 298 -4 1997 95 62 144 chr20 45259599 45260051 -26893831 - L1MA2 LINE L1 -6 6298 5884 353 219 76 19 chr20 45260055 45260146 -26893736 - MER5A DNA MER1_type -76 113 14 1591 141 83 0 chr20 45260146 45260423 -26893459 - AluJo SINE Alu -7 305 6 353 219 76 19 chr20 45260423 45260436 -26893446 - MER5A DNA MER1_type -175 14 3 1427 139 73 8 chr20 45260443 45260702 -26893180 + AluJb SINE Alu 2 277 -35 351 0 0 0 chr20 45260703 45260742 -26893140 + (CA)n Simple_repeat Simple_repeat 1 39 0 601 216 117 18 chr20 45260749 45260920 -26892962 + L1MC5 LINE L1 7330 7517 -444 250 160 173 27 chr20 45260928 45261003 -26892879 + L1MC5 LINE L1 7712 7797 -164 1589 157 57 0 chr20 45261246 45261527 -26892355 - AluSx SINE Alu -13 299 3 563 194 284 0 chr20 45261853 45261987 -26891895 + FAM SINE Alu 1 172 -3 1847 131 3 3 chr20 45262062 45262345 -26891537 + AluSp SINE Alu 1 283 -30 349 235 151 8 chr20 45262362 45262481 -26891401 - L1MC4 LINE L1 -499 7543 7408 712 222 143 4 chr20 45262565 45262817 -26891065 + L1MC4 LINE L1 7554 7840 -202 1871 135 3 14 chr20 45262823 45263112 -26890770 - AluSx SINE Alu -22 290 5 215 238 189 25 chr20 45263751 45263873 -26890009 - MIR SINE MIR -30 232 91 333 0 0 0 chr20 45266272 45266309 -26887573 + (A)n Simple_repeat Simple_repeat 1 37 0 497 263 153 22 chr20 45270561 45270789 -26883093 - L2 LINE L2 -1076 2238 1981 809 154 0 34 chr20 45270990 45271139 -26882743 + FRAM SINE Alu 17 160 -16 250 133 0 0 chr20 45271139 45271184 -26882698 - LTR30 LTR ERV1 -134 588 544 1463 74 230 0 chr20 45271191 45271408 -26882474 - LTR12 LTR ERV1 -445 269 3 1823 155 2 103 chr20 45271415 45271821 -26882061 + MLT1D LTR MaLR 4 368 -137 1686 104 4 4 chr20 45271846 45272087 -26881795 - AluSx SINE Alu -71 241 1 847 156 0 0 chr20 45272283 45272424 -26881458 + FRAM SINE Alu 22 162 -14 1115 129 5 48 chr20 45272435 45272621 -26881261 + AluJo SINE Alu 6 183 -129 1141 157 29 14 chr20 45272633 45272843 -26881039 + MER20 DNA MER1_type 1 213 -6 778 149 15 22 chr20 45272877 45273011 -26880871 - FLAM_C SINE Alu 0 133 1 188 237 132 13 chr20 45273061 45273137 -26880745 - L3 LINE CR1 -13 1564 1480 1435 194 26 3 chr20 45273229 45273533 -26880349 + AluJo SINE Alu 2 312 0 28 0 0 0 chr20 45273899 45273927 -26879955 + AT_rich Low_complexity Low_complexity 1 28 0 1668 60 75 21 chr20 45274029 45274286 -26879596 + LTR12 LTR ERV1 340 714 0 1377 183 33 11 chr20 45274328 45274453 -26879429 + AluJo SINE Alu 1 122 -190 2018 110 24 0 chr20 45274453 45274745 -26879137 + AluSx SINE Alu 1 299 -13 1377 183 33 11 chr20 45274745 45274893 -26878989 + AluJo SINE Alu 122 280 -32 279 275 55 18 chr20 45274913 45275022 -26878860 - L2 LINE L2 -1227 2087 1975 952 198 13 75 chr20 45275248 45275475 -26878407 + MER58A DNA MER1_type 10 222 -2 1728 159 28 0 chr20 45275594 45275883 -26877999 - AluJb SINE Alu -15 297 1 270 333 105 18 chr20 45276028 45276142 -26877740 + L2 LINE L2 2901 3024 -289 874 187 35 40 chr20 45276148 45276346 -26877536 + MSTD LTR MaLR 1 197 -199 810 70 0 0 chr20 45276386 45276486 -26877396 + HY3 scRNA scRNA 1 100 -1 263 48 71 0 chr20 45276498 45276540 -26877342 + MSTD LTR MaLR 323 367 -29 246 128 170 0 chr20 45276543 45276590 -26877292 + MSTD LTR MaLR 336 390 -6 377 340 94 9 chr20 45276594 45276806 -26877076 + L2 LINE L2 3036 3265 -48 2072 109 0 31 chr20 45276815 45277137 -26876745 + AluSx SINE Alu 1 312 0 742 193 89 0 chr20 45277159 45277322 -26876560 + FRAM SINE Alu 1 174 0 473 220 34 0 chr20 45277556 45277671 -26876211 + L1ME3A LINE L1 5477 5603 -566 553 259 86 0 chr20 45277692 45277866 -26876016 + L1ME3A LINE L1 5981 6169 -1 821 134 0 0 chr20 45277960 45278079 -26875803 - AluSc SINE Alu -10 299 181 270 132 0 0 chr20 45278079 45278117 -26875765 - AluSp/q SINE Alu -78 225 188 1531 103 0 0 chr20 45278118 45278322 -26875560 - AluSg SINE Alu -83 227 24 571 318 83 37 chr20 45278553 45278906 -26874976 - L3 LINE CR1 -11 1566 1188 1243 93 144 222 chr20 45278906 45279139 -26874743 + MSTA LTR MaLR 1 182 -246 1100 114 11 0 chr20 45279139 45279314 -26874568 + (TCCC)n Simple_repeat Simple_repeat 4 180 0 1243 93 144 222 chr20 45279314 45279544 -26874338 + MSTA LTR MaLR 182 428 0 571 318 83 37 chr20 45279544 45279621 -26874261 - L3 LINE CR1 -389 1188 1116 610 183 0 131 chr20 45279813 45279928 -26873954 + FLAM_A SINE Alu 1 93 -209 2131 111 0 3 chr20 45279928 45280226 -26873656 - AluSx SINE Alu -10 302 6 610 183 0 131 chr20 45280226 45280263 -26873619 + FLAM_A SINE Alu 93 133 -169 2101 107 3 3 chr20 45280407 45280705 -26873177 + AluSq SINE Alu 2 299 -14 961 242 49 0 chr20 45281402 45281625 -26872257 + L1ME1 LINE L1 5930 6163 -3 2216 99 0 3 chr20 45281642 45281945 -26871937 + AluSq SINE Alu 1 302 -11 1883 102 25 7 chr20 45282013 45282287 -26871595 + AluSx SINE Alu 1 279 -33 1267 231 62 3 chr20 45282486 45282710 -26871172 - MER7A DNA MER2_type -2692 346 98 2289 164 72 36 chr20 45282710 45282915 -26870967 - MER66B LTR ERV1 0 486 290 2035 130 0 0 chr20 45282915 45283214 -26870668 - AluSx SINE Alu -13 299 1 2289 164 72 36 chr20 45283214 45283477 -26870405 - MER66B LTR ERV1 -196 290 1 1267 231 62 3 chr20 45283477 45283576 -26870306 - MER7A DNA MER2_type -2940 98 6 766 288 44 26 chr20 45283590 45283816 -26870066 + MIR SINE MIR 33 262 0 1790 148 20 13 chr20 45284061 45284237 -26869645 - AluJb SINE Alu -4 308 128 2394 69 3 0 chr20 45284237 45284541 -26869341 - AluY SINE Alu -6 305 1 1790 148 20 13 chr20 45284541 45284667 -26869215 - AluJb SINE Alu -184 128 4 1016 229 60 89 chr20 45284843 45285258 -26868624 - LTR16C LTR ERVL -8 483 81 2287 107 0 0 chr20 45285351 45285661 -26868221 + AluSx SINE Alu 1 310 -2 1480 152 76 4 chr20 45285676 45285795 -26868087 + AluJo SINE Alu 5 114 -198 189 74 0 0 chr20 45285795 45285822 -26868060 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1480 152 76 4 chr20 45285822 45285978 -26867904 + AluJo SINE Alu 114 300 -12 2040 120 0 3 chr20 45286359 45286659 -26867223 - AluY SINE Alu -6 305 7 311 272 154 37 chr20 45286745 45286907 -26866975 + MIR SINE MIR 49 229 -33 657 197 57 0 chr20 45286916 45287038 -26866844 - MER58B DNA MER1_type 0 341 213 1927 109 27 0 chr20 45287063 45287356 -26866526 + AluSx SINE Alu 5 305 -7 216 294 35 47 chr20 45287444 45287529 -26866353 + L2 LINE L2 3188 3271 -1 442 264 120 24 chr20 45287536 45287703 -26866179 + MIR SINE MIR 5 187 -75 1244 243 38 10 chr20 45288296 45288584 -26865298 - LTR16C LTR ERVL -2 489 194 1718 97 208 0 chr20 45288584 45288863 -26865019 - MER51A LTR ERV1 0 634 298 1256 102 6 0 chr20 45288864 45289041 -26864841 - MER51A LTR ERV1 -456 178 1 247 207 230 11 chr20 45289094 45289181 -26864701 - LTR16C LTR ERVL -309 182 77 1977 107 0 24 chr20 45289286 45289598 -26864284 - AluSx SINE Alu 0 305 1 194 305 20 86 chr20 45289623 45289674 -26864208 + L2 LINE L2 2343 2396 -918 1618 156 96 53 chr20 45289674 45290072 -26863810 - MER96B DNA MER1_type -2 415 1 194 305 20 86 chr20 45290072 45290171 -26863711 + L2 LINE L2 2396 2483 -831 189 0 0 0 chr20 45290235 45290256 -26863626 + (T)n Simple_repeat Simple_repeat 1 21 0 260 340 39 33 chr20 45290272 45290425 -26863457 + MLT2E LTR ERVL 358 511 -117 1921 143 3 0 chr20 45290645 45290945 -26862937 - AluSx SINE Alu -11 301 1 221 280 56 28 chr20 45291735 45291842 -26862040 + MIR SINE MIR 121 230 -32 2270 127 24 0 chr20 45292313 45292644 -26861238 + THE1B LTR MaLR 1 339 -25 1045 75 0 0 chr20 45292645 45292778 -26861104 - AluSq/x SINE Alu -180 133 1 361 0 0 0 chr20 45292779 45292818 -26861064 + THE1B LTR MaLR 326 364 0 791 295 80 39 chr20 45292983 45293029 -26860853 + L2 LINE L2 2828 2871 -442 1724 163 7 7 chr20 45293029 45293330 -26860552 - AluJo SINE Alu -11 301 1 791 295 80 39 chr20 45293330 45293748 -26860134 + L2 LINE L2 2871 3311 -2 207 0 0 0 chr20 45293857 45293880 -26860002 + (TTTA)n Simple_repeat Simple_repeat 1 23 0 501 185 44 0 chr20 45294011 45294146 -26859736 + CT-rich Low_complexity Low_complexity 2 142 0 713 174 5 27 chr20 45294160 45294344 -26859538 + CT-rich Low_complexity Low_complexity 1 180 0 2126 135 3 0 chr20 45294352 45294663 -26859219 - AluSx SINE Alu 0 312 1 263 280 67 28 chr20 45294705 45294829 -26859053 + MIR SINE MIR 35 157 -58 961 146 103 27 chr20 45294830 45295015 -26858867 - MER20 DNA MER1_type -1 218 20 264 317 10 0 chr20 45295054 45295155 -26858727 + MIR SINE MIR 151 252 -10 456 237 10 10 chr20 45295252 45295349 -26858533 - MER63 DNA MER1_type -3 1059 963 * 460 149 0 0 chr20 45295342 45295416 -26858466 - MER63 DNA MER1_type -319 743 44 1401 182 88 0 chr20 45295437 45295733 -26858149 - Charlie4a DNA MER1_type -186 322 1 725 131 16 41 chr20 45295744 45295866 -26858016 + AluJb SINE Alu 7 125 -187 244 123 70 0 chr20 45295866 45295923 -26857959 + GA-rich Low_complexity Low_complexity 2 62 0 437 243 243 12 chr20 45295963 45296132 -26857750 + MIR SINE MIR 28 235 -27 495 90 0 0 chr20 45296134 45296212 -26857670 + (TG)n Simple_repeat Simple_repeat 2 79 0 1903 177 39 6 chr20 45296939 45297273 -26856609 - MER66B LTR ERV1 -141 345 1 1042 186 276 60 chr20 45297420 45297801 -26856081 + MER31B LTR ERV1 1 463 -3 976 172 12 0 chr20 45297997 45298160 -26855722 + FRAM SINE Alu 1 165 -1 1976 100 52 0 chr20 45298167 45298458 -26855424 + AluSp SINE Alu 1 306 -7 1624 164 7 14 chr20 45298884 45299177 -26854705 + AluJb SINE Alu 1 291 -21 2091 97 10 3 chr20 45299189 45299488 -26854394 - AluSx SINE Alu -11 301 1 2465 58 0 0 chr20 45299494 45299805 -26854077 - AluY SINE Alu 0 311 1 687 163 0 0 chr20 45299805 45299928 -26853954 + CT-rich Low_complexity Low_complexity 4 126 0 1116 286 216 23 chr20 45299934 45300643 -26853239 - L2 LINE L2 -529 2785 1940 1335 177 0 0 chr20 45300668 45300905 -26852977 + AluJb SINE Alu 65 301 -11 243 146 0 0 chr20 45300974 45301015 -26852867 + (TCCC)n Simple_repeat Simple_repeat 1 41 0 327 176 73 0 chr20 45301015 45301083 -26852799 - L1ME4a LINE L1 -62 6059 5987 1270 154 13 21 chr20 45301151 45301385 -26852497 - AluJo SINE Alu -11 301 70 22 0 0 0 chr20 45301532 45301554 -26852328 + AT_rich Low_complexity Low_complexity 1 22 0 457 284 16 88 chr20 45301628 45301971 -26851911 - L1MC4a LINE L1 -395 5769 5579 315 336 51 42 chr20 45301973 45302187 -26851695 - L1MC4 LINE L1 -26 8016 7801 3185 216 51 30 chr20 45302194 45302461 -26851421 - L1ME2 LINE L1 -10 6154 5894 2510 61 0 3 chr20 45302461 45302774 -26851108 - AluSx SINE Alu 0 312 1 3185 216 51 30 chr20 45302774 45303326 -26850556 - L1ME2 LINE L1 -270 5894 5318 1935 146 0 0 chr20 45303338 45303626 -26850256 - AluSx SINE Alu -24 288 1 1815 163 0 13 chr20 45303669 45304002 -26849880 + AluJb SINE Alu 1 312 0 3292 90 6 22 chr20 45304742 45305231 -26848651 - L1MA5A LINE L1 -3 6294 5814 508 181 0 0 chr20 45305247 45305330 -26848552 - AluSg/x SINE Alu -31 278 196 882 166 0 0 chr20 45305331 45305470 -26848412 - AluJb SINE Alu -173 139 1 3560 196 46 28 chr20 45305472 45305768 -26848114 - L1M4 LINE L1 -3224 3624 3335 2160 128 0 0 chr20 45305768 45306080 -26847802 - AluSx SINE Alu 0 312 1 3560 196 46 28 chr20 45306080 45306361 -26847521 - L1M4 LINE L1 -3513 3335 3061 2628 98 5 19 chr20 45306361 45306729 -26847153 - THE1B LTR MaLR 0 364 2 3560 196 46 28 chr20 45306729 45307285 -26846597 - L1M4 LINE L1 -3787 3061 2516 1782 149 6 37 chr20 45307285 45307607 -26846275 - AluJo SINE Alu 0 312 1 3560 196 46 28 chr20 45307607 45307981 -26845901 - L1M4 LINE L1 -4332 2516 2087 1321 220 13 32 chr20 45307981 45308290 -26845592 - AluJb SINE Alu -9 303 1 3560 196 46 28 chr20 45308290 45308340 -26845542 - L1M4 LINE L1 -4761 2087 2039 613 186 11 28 chr20 45308340 45308517 -26845365 + CT-rich Low_complexity Low_complexity 2 175 0 519 155 29 35 chr20 45308540 45308714 -26845168 + CT-rich Low_complexity Low_complexity 4 176 0 3112 126 0 3 chr20 45308746 45308765 -26845117 - L1M4 LINE L1 -4770 2079 2061 225 0 0 0 chr20 45308765 45308790 -26845092 + (TTCC)n Simple_repeat Simple_repeat 3 27 0 3112 126 0 3 chr20 45308790 45309283 -26844599 - L1M4 LINE L1 -4788 2061 1472 3026 124 35 4 chr20 45309288 45309773 -26844109 + L1PB2 LINE L1 5652 6151 0 1043 166 0 0 chr20 45309773 45309936 -26843946 + FRAM SINE Alu 1 158 -18 264 219 0 0 chr20 45310060 45310124 -26843758 - L1M4 LINE L1 -5263 1586 1523 1125 102 0 0 chr20 45310126 45310321 -26843561 + AluSg/x SINE Alu 128 322 0 6703 201 30 11 chr20 45310327 45311936 -26841946 - L1M4 LINE L1 -5312 1537 61 415 232 18 94 chr20 45311993 45312071 -26841811 - L1MEc LINE L1 -875 5205 5123 2137 96 23 3 chr20 45312071 45312373 -26841509 - AluSq SINE Alu -5 308 1 415 232 18 94 chr20 45312373 45312634 -26841248 - L1MEc LINE L1 -957 5123 4820 455 139 23 0 chr20 45312638 45312724 -26841158 + CT-rich Low_complexity Low_complexity 1 88 0 2042 118 7 3 chr20 45312724 45313020 -26840862 - AluSx SINE Alu -15 297 1 4337 241 31 65 chr20 45313020 45313910 -26839972 - L1MEc LINE L1 -1240 4840 3921 2003 138 0 0 chr20 45313910 45314207 -26839675 + AluJo SINE Alu 2 298 -14 4337 241 31 65 chr20 45314207 45314708 -26839174 - L1MEc LINE L1 -2159 3921 3517 2156 118 3 6 chr20 45314708 45315021 -26838861 - AluSx SINE Alu 0 312 1 4337 241 31 65 chr20 45315021 45315357 -26838525 - L1MEc LINE L1 -2563 3517 3171 1628 173 35 3 chr20 45315359 45315642 -26838240 - AluJo SINE Alu -20 292 1 8360 193 30 14 chr20 45315642 45315822 -26838060 - L1 LINE L1 -780 5548 5372 2217 105 0 13 chr20 45315822 45316135 -26837747 - AluSg SINE Alu -1 309 1 8360 193 30 14 chr20 45316135 45317779 -26836103 - L1 LINE L1 -956 5372 3694 756 156 67 78 chr20 45317779 45317958 -26835924 - FRAM SINE Alu 0 176 1 5293 157 7 10 chr20 45317959 45318823 -26835059 - L1 LINE L1 -4465 863 3 1605 244 72 50 chr20 45318826 45319604 -26834278 - L1MEc LINE L1 -3643 2437 1678 2167 132 127 5 chr20 45319604 45319983 -26833899 - MSTA LTR MaLR -3 425 1 1605 244 72 50 chr20 45319983 45320010 -26833872 - L1MEc LINE L1 -4402 1678 1653 1644 224 77 10 chr20 45320010 45320425 -26833457 + LTR47B LTR ERVL 1 443 0 1605 244 72 50 chr20 45320425 45320578 -26833304 - L1MEc LINE L1 -4427 1653 1499 995 213 57 48 chr20 45320581 45321063 -26832819 + MLT1E LTR MaLR 1 580 -13 227 122 41 0 chr20 45321065 45321114 -26832768 - L1MEc LINE L1 -4621 1459 1409 1362 140 5 14 chr20 45321118 45321340 -26832542 - AluJb SINE Alu -6 306 87 636 269 88 44 chr20 45321341 45321609 -26832273 - L1MEc LINE L1 -4692 1388 1094 1973 125 0 23 chr20 45321609 45321912 -26831970 - AluSq SINE Alu -17 296 1 636 269 88 44 chr20 45321912 45322052 -26831830 - L1MEc LINE L1 -4986 1094 962 26 0 0 0 chr20 45322052 45322078 -26831804 + AT_rich Low_complexity Low_complexity 1 26 0 711 104 10 0 chr20 45322078 45322174 -26831708 - U6 snRNA snRNA -10 97 1 693 249 42 8 chr20 45322183 45322420 -26831462 - L1MEc LINE L1 -5097 973 729 426 318 56 34 chr20 45322421 45322690 -26831192 - LTR16B LTR ERVL -8 442 128 622 203 7 65 chr20 45322732 45322830 -26831052 + MLT2F LTR ERVL 1 88 -575 2310 84 0 0 chr20 45322830 45323128 -26830754 - AluSx SINE Alu -14 298 1 622 203 7 65 chr20 45323128 45323182 -26830700 + MLT2F LTR ERVL 88 144 -519 18292 41 1 1 chr20 45323221 45326218 -26827664 + L1PA5 LINE L1 3145 6154 0 1808 115 0 0 chr20 45326552 45326835 -26827047 + AluSx SINE Alu 30 312 0 2080 217 45 9 chr20 45326839 45327281 -26826601 + MLT1C LTR MaLR 1 458 -9 776 157 51 67 chr20 45327279 45327309 -26826573 - MER33 DNA MER1_type -2410 175 146 * 1515 143 92 22 chr20 45327309 45327581 -26826301 - AluJb SINE Alu -11 291 1 776 157 51 67 chr20 45327581 45327728 -26826154 - MER33 DNA MER1_type -2439 146 1 2202 101 3 0 chr20 45327999 45328297 -26825585 + AluSq SINE Alu 1 299 -14 433 309 86 7 chr20 45328332 45328484 -26825398 - MER91A DNA MER1_type -30 166 3 702 233 151 6 chr20 45328964 45329123 -26824759 - MIR SINE MIR -49 213 32 1629 167 0 26 chr20 45329241 45329546 -26824336 - AluJo SINE Alu -15 297 1 8119 13 0 0 chr20 45330494 45331650 -26822232 + L1HS LINE L1 4999 6154 -1 180 0 0 0 chr20 45331654 45331674 -26822208 + (A)n Simple_repeat Simple_repeat 1 20 0 816 123 18 0 chr20 45331674 45331788 -26822094 - AluJb SINE Alu -195 117 2 405 184 119 37 chr20 45331971 45332080 -26821802 - MIR SINE MIR -70 138 21 396 250 27 92 chr20 45332215 45332343 -26821539 - MIR SINE MIR 0 262 148 2010 120 0 13 chr20 45332343 45332651 -26821231 - AluSq SINE Alu -9 304 1 396 250 27 92 chr20 45332651 45332706 -26821176 - MIR SINE MIR -114 148 91 2587 189 54 22 chr20 45332708 45333248 -26820634 - MER119 DNA MER1_type 0 583 27 1829 171 3 0 chr20 45333250 45333549 -26820333 - AluSx SINE Alu -10 302 3 1883 185 16 11 chr20 45333562 45333930 -26819952 - MLT1A2 LTR MaLR 0 374 5 226 292 31 0 chr20 45334099 45334164 -26819718 - L2 LINE L2 0 3313 3247 1023 307 50 28 chr20 45334566 45335003 -26818879 - MER115 DNA AcHobo -237 456 10 348 309 90 33 chr20 45335210 45335307 -26818575 - L1MEc LINE L1 -3559 2656 2566 1697 127 3 50 chr20 45335307 45335626 -26818256 - AluJb SINE Alu 0 305 1 348 309 90 33 chr20 45335626 45335973 -26817909 - L1MEc LINE L1 -3649 2566 2225 2045 130 7 0 chr20 45336005 45336313 -26817569 + AluSx SINE Alu 1 310 -2 1344 249 171 33 chr20 45336337 45337005 -26816877 + L1MC5 LINE L1 7155 7914 -47 1902 138 14 0 chr20 45337761 45338051 -26815831 - AluSx SINE Alu -18 294 1 487 278 139 41 chr20 45338321 45338566 -26815316 - L2 LINE L2 0 3272 3004 1909 125 50 0 chr20 45339290 45339587 -26814295 - AluSx SINE Alu 0 312 1 1558 249 32 0 chr20 45339790 45340131 -26813751 + LTR16C LTR ERVL 131 482 -9 1919 158 127 16 chr20 45340380 45340765 -26813117 + MSTA LTR MaLR 1 428 0 279 260 117 0 chr20 45340986 45341063 -26812819 - L2 LINE L2 0 3272 3187 876 99 0 0 chr20 45341124 45341245 -26812637 - L1PA15 LINE L1 -277 5888 5768 406 110 14 0 chr20 45341248 45341321 -26812561 + L1PA16 LINE L1 6093 6166 0 190 257 64 55 chr20 45341349 45341458 -26812424 - L2 LINE L2 -156 3116 3007 315 120 0 0 chr20 45341724 45341774 -26812108 - AluSp/q SINE Alu -8 295 246 2114 110 0 16 chr20 45341792 45342109 -26811773 - AluSx SINE Alu 0 312 1 352 239 137 26 chr20 45342215 45342332 -26811550 + MIR SINE MIR 108 237 -25 2377 87 0 0 chr20 45342332 45342641 -26811241 - AluSq SINE Alu -4 309 1 1453 169 16 0 chr20 45342695 45342938 -26810944 + Tigger3(Golem) DNA MER2_type 2782 3028 -1 304 273 9 36 chr20 45343504 45343614 -26810268 - MIR3 SINE MIR -29 179 73 2681 90 62 25 chr20 45344846 45345278 -26808604 - LTR7 LTR ERV1 -2 448 1 363 284 74 34 chr20 45345398 45345546 -26808336 + MIR SINE MIR 20 173 -89 926 154 74 17 chr20 45345564 45345739 -26808143 - MER5A DNA MER1_type -3 186 2 2105 156 37 3 chr20 45345765 45346117 -26807765 + THE1B LTR MaLR 1 364 0 860 191 31 46 chr20 45346158 45346352 -26807530 + MER20 DNA MER1_type 29 219 0 220 318 45 0 chr20 45346366 45346432 -26807450 + MIR SINE MIR 55 123 -85 560 264 233 15 chr20 45347043 45347502 -26806380 - L2 LINE L2 -628 2686 2128 490 234 5 0 chr20 45347510 45347625 -26806257 - LTR16C LTR ERVL -2 464 338 1135 239 133 42 chr20 45347626 45348086 -26805796 + MLT1H LTR MaLR 1 546 -3 569 302 10 26 chr20 45348125 45348317 -26805565 + L3 LINE CR1 819 1007 -570 2021 123 7 10 chr20 45348643 45348944 -26804938 - AluSx SINE Alu -12 300 1 1133 152 16 5 chr20 45349052 45349236 -26804646 - MER5A DNA MER1_type 0 189 4 886 137 0 0 chr20 45349328 45349459 -26804423 - FLAM_C SINE Alu 0 133 3 414 0 0 0 chr20 45349504 45349550 -26804332 + (TG)n Simple_repeat Simple_repeat 1 46 0 392 184 86 161 chr20 45349805 45349864 -26804018 + MER5B DNA MER1_type 9 71 -107 2756 90 5 0 chr20 45349864 45350231 -26803651 + L1PB1 LINE L1 5782 6150 -1 392 184 86 161 chr20 45350231 45350345 -26803537 + MER5B DNA MER1_type 71 169 -9 892 231 0 0 chr20 45350406 45350579 -26803303 + MER5B DNA MER1_type 1 173 -5 1167 209 69 52 chr20 45350682 45350797 -26803085 + LTR50 LTR ERVL 441 553 -242 192 40 0 0 chr20 45350797 45350822 -26803060 + (TATG)n Simple_repeat Simple_repeat 2 26 0 1167 209 69 52 chr20 45350822 45350835 -26803047 + LTR50 LTR ERVL 553 564 -231 1656 171 4 4 chr20 45350835 45351116 -26802766 - AluJb SINE Alu -31 281 1 1167 209 69 52 chr20 45351116 45351335 -26802547 + LTR50 LTR ERVL 564 795 0 382 289 78 87 chr20 45351345 45352010 -26801872 + HAL1b LINE L1 114 772 -576 1433 201 10 13 chr20 45352205 45352383 -26801499 - AluJb SINE Alu 0 312 134 203 61 30 0 chr20 45352383 45352416 -26801466 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 1433 201 10 13 chr20 45352416 45352550 -26801332 - AluJb SINE Alu -178 134 1 2197 93 0 0 chr20 45352989 45353278 -26800604 + AluSq SINE Alu 9 297 -16 438 306 88 10 chr20 45353607 45353800 -26800082 + MIR SINE MIR 45 252 -10 261 272 11 11 chr20 45353868 45353882 -26800000 + HAL1b LINE L1 1186 1199 -149 1161 176 18 27 chr20 45353882 45354103 -26799779 - MER20 DNA MER1_type 0 219 1 261 272 11 11 chr20 45354103 45354180 -26799702 + HAL1b LINE L1 1198 1277 -71 2297 94 7 0 chr20 45354183 45354491 -26799391 - AluSg SINE Alu 0 310 1 2313 94 7 0 chr20 45355541 45355849 -26798033 + AluSx SINE Alu 1 310 -2 21135 32 3 0 chr20 45355906 45359195 -26794687 - L1PA3 LINE L1 0 6155 2858 483 202 89 8 chr20 45359203 45359327 -26794555 - MER3 DNA MER1_type -11 198 65 2058 114 42 30 chr20 45359359 45359692 -26794190 - MER1B DNA MER1_type 0 337 1 320 248 73 80 chr20 45359695 45359969 -26793913 - L1ME4a LINE L1 -37 6084 5813 3670 96 29 16 chr20 45360150 45360162 -26793720 - L1PA16 LINE L1 -9 6157 6147 2057 114 0 3 chr20 45360162 45360461 -26793421 + AluSx SINE Alu 1 298 -14 3670 96 29 16 chr20 45360461 45361002 -26792880 - L1PA16 LINE L1 -19 6147 5597 275 175 0 16 chr20 45361312 45361375 -26792507 + CT-rich Low_complexity Low_complexity 3 64 0 387 296 52 0 chr20 45361386 45361501 -26792381 - L2 LINE L2 -25 3288 3168 979 206 9 18 chr20 45361803 45362022 -26791860 + MER20 DNA MER1_type 1 217 -2 2137 97 21 0 chr20 45362407 45362697 -26791185 + AluSx SINE Alu 1 296 -16 613 183 57 51 chr20 45363006 45363191 -26790691 - MER51C LTR ERV1 -3 613 197 424 325 19 12 chr20 45363514 45363674 -26790208 + MIR3 SINE MIR 2 162 -46 493 309 33 7 chr20 45364087 45364239 -26789643 - MIR SINE MIR -70 192 37 183 42 0 0 chr20 45364327 45364351 -26789531 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2153 106 14 0 chr20 45364713 45365006 -26788876 - AluSx SINE Alu -13 299 3 369 272 44 67 chr20 45365131 45365311 -26788571 + L2 LINE L2 2985 3160 -112 210 297 40 14 chr20 45365552 45365626 -26788256 - MIR SINE MIR -78 184 109 782 218 69 0 chr20 45365752 45365926 -26787956 + MER5A DNA MER1_type 4 189 0 1810 142 4 0 chr20 45366008 45366289 -26787593 + AluSx SINE Alu 26 307 -5 362 214 79 0 chr20 45366815 45366904 -26786978 - L1ME3 LINE L1 0 6162 6067 211 222 0 0 chr20 45367070 45367115 -26786767 + MER5A DNA MER1_type 9 53 -136 1995 111 7 7 chr20 45367115 45367413 -26786469 - AluSx SINE Alu -10 302 5 647 308 35 39 chr20 45368386 45368435 -26785447 - L1ME3A LINE L1 -315 5855 5807 437 96 0 160 chr20 45368435 45368529 -26785353 + MADE1 DNA Mariner 1 79 -1 647 308 35 39 chr20 45368529 45368914 -26784968 - L1ME3A LINE L1 -363 5807 5423 369 265 133 7 chr20 45368933 45369084 -26784798 + MIR3 SINE MIR 2 171 -37 509 131 71 0 chr20 45369661 45369745 -26784137 + MER53 DNA DNA 100 189 0 2648 137 18 32 chr20 45369837 45370275 -26783607 + MSTB1 LTR MaLR 1 432 0 880 225 39 0 chr20 45370520 45370698 -26783184 + MER5A DNA MER1_type 3 187 -2 2342 75 0 0 chr20 45370904 45371199 -26782683 - AluY SINE Alu -16 295 1 2402 62 7 0 chr20 45371208 45371513 -26782369 - AluY SINE Alu -4 307 1 266 260 240 41 chr20 45371808 45371954 -26781928 + L3 LINE CR1 1379 1553 -24 467 96 0 27 chr20 45372771 45372844 -26781038 + Alu SINE Alu 234 304 -8 1258 199 25 75 chr20 45372844 45373008 -26780874 + MER97a DNA MER1_type? 484 655 -239 1921 138 3 3 chr20 45373008 45373313 -26780569 - AluSx SINE Alu -7 305 1 1258 199 25 75 chr20 45373313 45373550 -26780332 + MER97a DNA MER1_type? 655 865 -29 213 173 19 19 chr20 45374836 45374888 -26778994 + GA-rich Low_complexity Low_complexity 4 55 0 757 259 73 12 chr20 45374967 45375214 -26778668 + LTR16C LTR ERVL 230 491 0 2647 157 43 12 chr20 45375244 45375734 -26778148 - MLT1D LTR MaLR 0 505 1 2024 72 58 0 chr20 45376136 45376413 -26777469 - AluSc SINE Alu -16 293 1 1385 218 74 42 chr20 45376488 45376733 -26777149 - MLT1C LTR MaLR -16 451 183 1949 116 3 24 chr20 45376733 45377070 -26776812 - AluSx SINE Alu 0 331 1 1385 218 74 42 chr20 45377070 45377253 -26776629 - MLT1C LTR MaLR -284 183 7 761 214 99 36 chr20 45377257 45377509 -26776373 + LTR16C LTR ERVL 218 485 -6 245 190 17 52 chr20 45379441 45379499 -26774383 + L2 LINE L2 3013 3068 -245 2165 115 0 3 chr20 45379539 45379826 -26774056 - AluSx SINE Alu -4 308 23 429 228 53 116 chr20 45379893 45380082 -26773800 - MIR SINE MIR -60 202 26 456 288 61 15 chr20 45380267 45380465 -26773417 - MIR SINE MIR -48 214 8 239 343 124 25 chr20 45380583 45380784 -26773098 + MIR SINE MIR 32 252 -10 389 272 56 0 chr20 45380941 45381066 -26772816 - L2 LINE L2 0 3313 3182 1072 193 11 0 chr20 45381267 45381454 -26772428 - MER5A DNA MER1_type 0 189 1 333 283 134 37 chr20 45381459 45381646 -26772236 - LTR33 LTR ERVL -273 248 44 * 365 293 37 60 chr20 45381643 45381858 -26772024 + LTR33 LTR ERVL 312 521 0 563 217 0 50 chr20 45382075 45382195 -26771687 - MER81 DNA DNA 0 114 1 791 286 13 21 chr20 45382268 45382502 -26771380 - MIR SINE MIR -4 258 27 2042 60 4 8 chr20 45382507 45382757 -26771125 - AluSp SINE Alu -10 303 55 277 350 48 0 chr20 45383571 45383674 -26770208 + MIR SINE MIR 83 190 -72 589 317 91 9 chr20 45383816 45384046 -26769836 + MIR SINE MIR 3 251 -11 24 0 0 0 chr20 45384491 45384515 -26769367 + AT_rich Low_complexity Low_complexity 1 24 0 296 157 20 0 chr20 45385129 45385180 -26768702 + AluJ/FRAM SINE Alu 227 278 -24 * 301 118 20 0 chr20 45385179 45385230 -26768652 + AluJ/FRAM SINE Alu 227 278 -24 * 305 120 3 0 chr20 45385229 45385280 -26768602 + AluSc SINE Alu 232 275 -24 287 150 67 0 chr20 45385270 45385330 -26768552 + AluJ/FRAM SINE Alu 215 278 -24 * 309 118 20 0 chr20 45385329 45385380 -26768502 + AluJ/FRAM SINE Alu 227 278 -24 * 321 115 19 0 chr20 45385378 45385430 -26768452 + AluJ/FRAM SINE Alu 226 278 -24 321 115 19 0 chr20 45385428 45385480 -26768402 + AluJ/FRAM SINE Alu 226 278 -24 321 115 19 0 chr20 45385478 45385530 -26768352 + AluJ/FRAM SINE Alu 226 278 -24 321 115 19 0 chr20 45385528 45385580 -26768302 + AluJ/FRAM SINE Alu 226 278 -24 302 135 19 0 chr20 45385578 45385630 -26768252 + AluJ/FRAM SINE Alu 226 278 -24 * 321 115 19 0 chr20 45385628 45385680 -26768202 + AluJ/FRAM SINE Alu 226 278 -24 321 115 19 0 chr20 45385678 45385730 -26768152 + AluJ/FRAM SINE Alu 226 278 -24 302 135 19 0 chr20 45385728 45385780 -26768102 + AluJ/FRAM SINE Alu 226 278 -24 * 314 135 19 0 chr20 45385778 45385830 -26768052 + AluJ/FRAM SINE Alu 226 278 -24 314 135 19 0 chr20 45385828 45385880 -26768002 + AluJ/FRAM SINE Alu 226 278 -24 * 321 115 19 0 chr20 45385878 45385930 -26767952 + AluJ/FRAM SINE Alu 226 278 -24 274 192 19 0 chr20 45385928 45385980 -26767902 + AluJ/FRAM SINE Alu 226 278 -24 * 283 242 32 0 chr20 45389479 45389537 -26764345 + MLT1E LTR MaLR 1 60 -482 2456 163 80 18 chr20 45389537 45389988 -26763894 + MLT2B1 LTR ERVL 1 366 -48 231 204 0 0 chr20 45389988 45390042 -26763840 + CT-rich Low_complexity Low_complexity 2 55 0 195 129 0 0 chr20 45390055 45390086 -26763796 + (GA)n Simple_repeat Simple_repeat 2 32 0 2050 147 3 0 chr20 45390108 45390400 -26763482 - AluSq SINE Alu -20 293 1 255 127 0 84 chr20 45390430 45390501 -26763381 + MLT2B1 LTR ERVL 443 507 -8 1253 258 108 21 chr20 45390509 45390944 -26762938 + MLT1E LTR MaLR 57 529 -64 28 48 0 0 chr20 45391420 45391462 -26762420 + AT_rich Low_complexity Low_complexity 1 42 0 242 264 73 36 chr20 45391467 45391577 -26762305 + L1MC4 LINE L1 6865 6978 -1064 2031 149 0 7 chr20 45392029 45392330 -26761552 - AluSx SINE Alu -13 299 1 221 0 35 0 chr20 45392471 45392500 -26761382 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 404 323 30 10 chr20 45392634 45392835 -26761047 - L1MC/D LINE L1 -2187 5621 5417 475 341 90 14 chr20 45392923 45393146 -26760736 - MIR SINE MIR -1 261 22 1732 202 105 18 chr20 45393171 45393760 -26760122 - L1MB8 LINE L1 -39 6145 5536 2108 127 0 10 chr20 45394044 45394336 -26759546 + AluSc SINE Alu 1 289 -20 2123 127 10 0 chr20 45395293 45395592 -26758290 + AluSx SINE Alu 5 306 -6 759 315 22 1 chr20 45395720 45395956 -26757926 - MIR SINE MIR -21 241 3 201 154 0 0 chr20 45398133 45398172 -26755710 + CT-rich Low_complexity Low_complexity 1 39 0 210 139 0 0 chr20 45399403 45399439 -26754443 + (CGGGGG)n Simple_repeat Simple_repeat 6 41 0 26 30 0 0 chr20 45399557 45399590 -26754292 + GC_rich Low_complexity Low_complexity 1 33 0 291 54 0 0 chr20 45399607 45399644 -26754238 + (CCG)n Simple_repeat Simple_repeat 2 38 0 208 403 7 13 chr20 45400961 45401110 -26752772 - MER5B DNA MER1_type 0 178 31 218 296 0 14 chr20 45401114 45401185 -26752697 - L2 LINE L2 -8 3305 3236 187 229 146 0 chr20 45402418 45402466 -26751416 + MIR SINE MIR 81 135 -127 362 252 84 15 chr20 45402575 45402706 -26751176 - L2 LINE L2 -3 3310 3171 275 238 19 19 chr20 45402901 45402981 -26750901 - MIR SINE MIR -30 178 99 610 193 64 21 chr20 45403080 45403220 -26750662 - MER3 DNA MER1_type -63 146 1 481 189 0 0 chr20 45403248 45403338 -26750544 + MER58A DNA MER1_type 29 118 0 1048 226 32 5 chr20 45403374 45403591 -26750291 + MER58A DNA MER1_type 1 223 -1 1071 173 22 0 chr20 45403643 45403822 -26750060 + MER5A DNA MER1_type 7 189 0 331 227 42 59 chr20 45404686 45404805 -26749077 - L3 LINE CR1 -360 1217 1101 422 303 74 6 chr20 45404822 45404997 -26748885 + MIR SINE MIR 44 230 -32 2399 90 3 0 chr20 45405632 45405933 -26747949 + AluSx SINE Alu 1 302 -10 301 330 7 84 chr20 45406014 45406241 -26747641 + L2 LINE L2 2615 2817 -497 1971 151 3 10 chr20 45406241 45406540 -26747342 - AluSx SINE Alu -15 297 1 301 330 7 84 chr20 45406540 45406597 -26747285 + L2 LINE L2 2817 2877 -437 286 309 41 0 chr20 45406610 45406707 -26747175 - L2 LINE L2 -283 2989 2889 196 276 124 81 chr20 45406726 45406911 -26746971 + L2 LINE L2 2828 3020 -252 241 366 65 0 chr20 45406987 45407110 -26746772 + L2 LINE L2 3132 3262 -10 303 233 302 0 chr20 45408026 45408142 -26745740 - MER5B DNA MER1_type 0 178 28 397 191 0 45 chr20 45408435 45408524 -26745358 + MER5A DNA MER1_type 96 180 -9 683 255 76 85 chr20 45408683 45409130 -26744752 - MLT1K LTR MaLR -4 584 142 2276 62 48 7 chr20 45409261 45409552 -26744330 + AluY SINE Alu 1 303 -8 2074 142 0 0 chr20 45409671 45409967 -26743915 - AluSx SINE Alu -16 296 1 291 250 208 0 chr20 45410074 45410194 -26743688 - MIR SINE MIR -22 240 96 257 204 20 0 chr20 45411017 45411066 -26742816 - MIR SINE MIR -107 155 106 366 276 147 6 chr20 45412219 45412375 -26741507 + MIR SINE MIR 85 262 0 276 323 21 0 chr20 45412389 45412485 -26741397 - MLT1K LTR MaLR 0 588 491 1248 241 91 50 chr20 45412492 45412989 -26740893 - LTR33A LTR ERVL -5 518 2 390 256 128 23 chr20 45413219 45413352 -26740530 - MLT1K LTR MaLR -360 228 82 1594 261 30 8 chr20 45413426 45413821 -26740061 + MLT1I LTR MaLR 1 404 -5 511 271 149 14 chr20 45414051 45414265 -26739617 - MIR SINE MIR 0 262 20 592 227 23 0 chr20 45414450 45414582 -26739300 - MLT1I LTR MaLR -272 137 3 301 314 38 13 chr20 45415221 45415380 -26738502 - L2 LINE L2 -4 3309 3147 2833 120 34 7 chr20 45416056 45416473 -26737409 - MSTA LTR MaLR 0 428 1 244 335 16 73 chr20 45417466 45417657 -26736225 + MIR3 SINE MIR 24 203 -5 595 203 122 0 chr20 45418385 45418508 -26735374 + MIR SINE MIR 3 140 -122 1354 204 49 17 chr20 45418555 45418899 -26734983 + MLT1A1 LTR MaLR 11 365 0 1074 268 117 51 chr20 45419041 45419261 -26734621 - L2 LINE L2 -2 3311 3107 2325 108 0 0 chr20 45419261 45419556 -26734326 + AluSx SINE Alu 1 295 -17 1074 268 117 51 chr20 45419556 45419898 -26733984 - L2 LINE L2 -206 3107 2717 318 239 52 67 chr20 45420130 45420264 -26733618 - L2 LINE L2 0 3272 3141 379 218 0 23 chr20 45420631 45420718 -26733164 - MIR SINE MIR -5 257 173 873 218 116 118 chr20 45420745 45421194 -26732688 + LTR16C LTR ERVL 44 491 0 465 246 16 120 chr20 45421211 45421394 -26732488 - MIR SINE MIR -97 165 2 245 224 0 35 chr20 45422543 45422628 -26731254 + GA-rich Low_complexity Low_complexity 4 85 0 1077 300 38 11 chr20 45422973 45423340 -26730542 - MLT1I LTR MaLR -16 393 17 1439 175 173 22 chr20 45423340 45423711 -26730171 + MSTC LTR MaLR 1 427 -1 2385 125 31 0 chr20 45424079 45424431 -26729451 + THE1B LTR MaLR 2 364 0 198 0 0 0 chr20 45424470 45424492 -26729390 + (TTCA)n Simple_repeat Simple_repeat 1 22 0 632 263 60 81 chr20 45424924 45425331 -26728551 + LTR16A1 LTR ERVL 73 452 -5 591 324 32 88 chr20 45425336 45425778 -26728104 - L2 LINE L2 -27 3245 2829 1060 282 134 12 chr20 45426108 45426527 -26727355 - LTR16C LTR ERVL -5 486 17 1642 231 19 26 chr20 45427069 45427488 -26726394 - LTR16C LTR ERVL -2 489 74 310 337 22 0 chr20 45428238 45428330 -26725552 + L2 LINE L2 3178 3271 -1 582 334 101 43 chr20 45428495 45428662 -26725220 - L2 LINE L2 -1 3271 3115 2042 206 84 50 chr20 45428662 45429207 -26724675 + MLT1F1 LTR MaLR 2 565 -2 582 334 101 43 chr20 45429207 45429574 -26724308 - L2 LINE L2 -157 3115 2703 1007 256 87 64 chr20 45429947 45430384 -26723498 - LTR16A1 LTR ERVL -10 447 1 900 276 29 16 chr20 45430734 45430977 -26722905 + MIR SINE MIR 7 252 -10 420 262 128 24 chr20 45431386 45431550 -26722332 - MIR SINE MIR -5 257 77 1720 161 7 23 chr20 45431843 45432153 -26721729 + 7SLRNA srpRNA srpRNA 1 305 -15 1276 278 44 17 chr20 45432222 45432632 -26721250 - LTR16C LTR ERVL 0 491 71 449 239 114 36 chr20 45432732 45432899 -26720983 - MIR SINE MIR -81 181 2 1254 226 37 34 chr20 45432991 45433340 -26720542 - L1MA9 LINE L1 -38 6274 5925 723 260 36 0 chr20 45433675 45433871 -26720011 + MIR SINE MIR 45 247 -15 208 204 0 23 chr20 45433837 45433881 -26720001 + L2 LINE L2 3259 3301 -12 * 420 20 0 0 chr20 45433997 45434046 -26719836 + (TG)n Simple_repeat Simple_repeat 1 49 0 1315 133 0 0 chr20 45434830 45435025 -26718857 - AluSg/x SINE Alu -14 296 102 356 292 58 0 chr20 45435044 45435164 -26718718 - MIR SINE MIR -91 171 45 470 82 0 0 chr20 45435339 45435400 -26718482 - Alu SINE Alu -256 62 2 959 261 36 12 chr20 45435836 45436085 -26717797 - MIR SINE MIR -5 257 3 392 311 53 0 chr20 45436169 45436301 -26717581 - MIR SINE MIR -7 255 117 185 282 0 0 chr20 45436417 45436456 -26717426 - MIR SINE MIR -176 86 48 35 92 0 0 chr20 45436530 45436628 -26717254 + AT_rich Low_complexity Low_complexity 1 98 0 1792 158 13 0 chr20 45436775 45437086 -26716796 - L1MA4 LINE L1 -6 6294 5980 882 115 0 14 chr20 45437088 45437227 -26716655 - AluSg/x SINE Alu 0 309 173 294 81 99 0 chr20 45437227 45437285 -26716597 - L1MA3 LINE L1 -309 5996 5925 3637 192 60 28 chr20 45437454 45438302 -26715580 - L1MC4a LINE L1 0 7808 6934 419 319 45 30 chr20 45438334 45438670 -26715212 - L1M4 LINE L1 -1314 4832 4492 2195 88 0 39 chr20 45438825 45439133 -26714749 - AluSc SINE Alu -13 296 1 1286 294 200 19 chr20 45439153 45439870 -26714012 - L2 LINE L2 0 3313 2471 1693 169 3 10 chr20 45440045 45440353 -26713529 + AluJb SINE Alu 1 306 -6 310 308 47 9 chr20 45441251 45441358 -26712524 + MIR3 SINE MIR 82 192 -16 1546 217 110 17 chr20 45442597 45442773 -26711109 + MLT1C LTR MaLR 10 168 -299 270 0 0 0 chr20 45442773 45442803 -26711079 + (CA)n Simple_repeat Simple_repeat 2 31 0 1546 217 110 17 chr20 45442803 45443045 -26710837 + MLT1C LTR MaLR 168 467 0 334 351 73 33 chr20 45443268 45443478 -26710404 + MIR SINE MIR 2 225 -37 2248 167 10 10 chr20 45443478 45443868 -26710014 + MLT1B LTR MaLR 1 390 0 334 351 73 33 chr20 45443868 45443902 -26709980 + MIR SINE MIR 225 256 -6 189 0 0 0 chr20 45443939 45443960 -26709922 + (TA)n Simple_repeat Simple_repeat 1 21 0 1986 131 0 3 chr20 45443961 45444258 -26709624 - AluSx SINE Alu -16 296 1 2096 240 59 50 chr20 45444283 45445017 -26708865 + HsTC2a DNA MER2_type 5 744 0 386 232 112 27 chr20 45445019 45445188 -26708694 - MIR SINE MIR -62 146 6 698 259 57 0 chr20 45445773 45445931 -26707951 - MER5A DNA MER1_type -22 167 1 438 165 72 21 chr20 45446111 45446208 -26707674 + MIR SINE MIR 94 195 -67 27 29 0 0 chr20 45446297 45446331 -26707551 + AT_rich Low_complexity Low_complexity 1 34 0 239 259 0 12 chr20 45446642 45446723 -26707159 + CT-rich Low_complexity Low_complexity 2 81 0 422 313 48 20 chr20 45446855 45447002 -26706880 + MIR SINE MIR 1 151 -111 1035 184 45 0 chr20 45447041 45447220 -26706662 - MSTC LTR MaLR -8 420 234 245 206 206 0 chr20 45447399 45447467 -26706415 + MER91C DNA MER1_type 37 118 -22 370 232 11 32 chr20 45447627 45447722 -26706160 - MIR SINE MIR 0 262 170 226 244 0 0 chr20 45447726 45447767 -26706115 - MIR SINE MIR -206 56 16 355 274 62 9 chr20 45447869 45447982 -26705900 - MIR SINE MIR -112 150 32 523 215 154 3 chr20 45448628 45448841 -26705041 + MLT1J2 LTR MaLR 66 302 -148 1998 134 46 52 chr20 45449352 45449718 -26704164 - THE1B LTR MaLR 0 364 1 182 235 0 0 chr20 45449927 45449961 -26703921 + L2 LINE L2 2938 2971 -301 234 258 16 16 chr20 45449987 45450049 -26703833 + MLT1K LTR MaLR 4 65 -523 772 127 0 0 chr20 45450270 45450380 -26703502 + AluSg/x SINE Alu 190 299 -13 527 237 32 58 chr20 45450391 45450438 -26703444 + MLT1K LTR MaLR 411 458 -130 1461 240 37 56 chr20 45450438 45450900 -26702982 + LTR16A1 LTR ERVL 5 457 0 527 237 32 58 chr20 45450900 45451008 -26702874 + MLT1K LTR MaLR 458 562 -26 526 323 10 30 chr20 45451828 45452029 -26701853 - MIR SINE MIR -64 198 2 365 213 74 25 chr20 45452376 45452498 -26701384 + MIR SINE MIR 125 252 -10 237 273 15 0 chr20 45452529 45452595 -26701287 - MIR SINE MIR -65 143 77 1878 141 56 24 chr20 45453730 45454071 -26699811 + L1MB5 LINE L1 5813 6164 -10 2187 93 0 0 chr20 45454087 45454376 -26699506 + AluSg1 SINE Alu 3 291 -18 340 240 220 20 chr20 45454955 45455105 -26698777 - MIR SINE MIR -51 211 32 230 320 74 8 chr20 45455193 45455315 -26698567 + L2 LINE L2 3138 3267 -5 499 330 195 14 chr20 45455672 45456021 -26697861 + L3 LINE CR1 727 1138 -439 241 336 112 61 chr20 45456399 45456810 -26697072 + L2 LINE L2 2841 3272 0 241 215 21 0 chr20 45456812 45456905 -26696977 + (TGGA)n Simple_repeat Simple_repeat 4 98 0 1070 272 164 3 chr20 45457242 45457613 -26696269 - LTR16A LTR ERVL -4 446 16 332 237 21 0 chr20 45457694 45457787 -26696095 + (TGGA)n Simple_repeat Simple_repeat 4 98 0 990 271 71 16 chr20 45457800 45458439 -26695443 - HERV16 LTR ERVL -3938 1058 358 1356 191 22 4 chr20 45458473 45458740 -26695142 - AluJb SINE Alu -40 272 1 303 247 35 12 chr20 45458750 45458835 -26695047 - HERV16 LTR ERVL -4644 352 266 247 282 39 0 chr20 45459049 45459127 -26694755 - LTR16A LTR ERVL 0 450 370 890 256 111 23 chr20 45459199 45459550 -26694332 - MLT1J2 LTR MaLR -63 387 6 1474 280 98 24 chr20 45460696 45461088 -26692794 + LTR16C LTR ERVL 6 438 -53 2170 52 44 0 chr20 45461088 45461397 -26692485 + AluY SINE Alu 1 321 0 1474 280 98 24 chr20 45461397 45461453 -26692429 + LTR16C LTR ERVL 438 488 -3 216 67 0 0 chr20 45461649 45461679 -26692203 + (CA)n Simple_repeat Simple_repeat 1 30 0 418 211 10 19 chr20 45461940 45462044 -26691838 + L1MD2 LINE L1 6240 6342 -17 293 299 30 26 chr20 45462195 45462426 -26691456 + HAL1 LINE L1 1093 1324 -1183 275 199 130 137 chr20 45463134 45463280 -26690602 - MER102a DNA MER1_type 0 330 186 190 327 0 0 chr20 45463454 45463509 -26690373 + L2 LINE L2 3223 3277 -36 393 250 121 14 chr20 45463583 45463723 -26690159 - MIR SINE MIR -74 188 34 207 261 62 54 chr20 45463865 45463995 -26689887 + L2 LINE L2 2568 2698 -616 258 303 60 72 chr20 45464079 45464330 -26689552 + L2 LINE L2 2811 3058 -214 365 283 102 24 chr20 45464591 45464721 -26689161 - MIR SINE MIR -56 206 59 1119 75 0 44 chr20 45464721 45464880 -26689002 + L1PA11 LINE L1 6022 6173 -1 365 283 102 24 chr20 45464880 45464915 -26688967 - MIR SINE MIR -203 59 28 226 298 75 11 chr20 45464968 45465062 -26688820 - L3 LINE CR1 -337 1240 1141 367 145 16 0 chr20 45465264 45465326 -26688556 - L1MB7 LINE L1 -234 5950 5888 800 168 15 0 chr20 45465338 45465469 -26688413 + L1MB7 LINE L1 5990 6122 -62 632 168 44 7 chr20 45465469 45465606 -26688276 - L1MB3 LINE L1 -1 6182 6041 350 122 0 0 chr20 45465606 45465655 -26688227 - MLT2C1 LTR ERVL 0 397 349 2952 152 9 6 chr20 45465665 45466132 -26687750 - Tigger3(Golem) DNA MER2_type -1 3028 2561 1874 114 89 0 chr20 45466227 45466508 -26687374 - AluSq SINE Alu -7 306 1 289 113 0 19 chr20 45466511 45466564 -26687318 + L1MB7 LINE L1 6114 6165 -19 253 250 8 70 chr20 45466595 45466723 -26687159 + L1MC4 LINE L1 7522 7641 -401 442 304 119 57 chr20 45466846 45467231 -26686651 + MLT1J LTR MaLR 103 511 0 514 244 28 68 chr20 45467253 45467429 -26686453 + MIR SINE MIR 94 262 0 2639 25 0 13 chr20 45467526 45467841 -26686041 + AluYa5 SINE Alu 1 311 0 1249 117 0 0 chr20 45467841 45468021 -26685861 + AluSc SINE Alu 124 303 -6 397 321 9 0 chr20 45468138 45468244 -26685638 + MIR SINE MIR 5 111 -151 506 168 42 0 chr20 45468246 45468341 -26685541 + MSTA LTR MaLR 2 100 -326 2108 168 59 35 chr20 45468341 45468877 -26685005 + MLT2A2 LTR ERVL 1 553 -1 1878 138 41 11 chr20 45468878 45469182 -26684700 + MSTA LTR MaLR 105 428 0 536 208 67 0 chr20 45469182 45469302 -26684580 + MIR SINE MIR 109 236 -26 474 96 0 0 chr20 45469427 45469500 -26684382 + (TGGA)n Simple_repeat Simple_repeat 4 76 0 2137 106 3 3 chr20 45469680 45469981 -26683901 - AluSc SINE Alu -8 301 1 257 298 135 10 chr20 45470579 45470683 -26683199 - MIR SINE MIR -115 147 31 311 259 95 54 chr20 45471094 45471241 -26682641 - L2 LINE L2 0 3313 3161 568 280 32 16 chr20 45471328 45471517 -26682365 - MIR SINE MIR -70 192 1 274 299 0 23 chr20 45472113 45472200 -26681682 + MARNA DNA Mariner 44 128 -458 204 97 0 0 chr20 45472935 45472966 -26680916 + (TC)n Simple_repeat Simple_repeat 2 32 0 245 290 103 19 chr20 45473990 45474097 -26679785 - MIR3 SINE MIR -6 202 87 389 294 106 69 chr20 45474148 45474423 -26679459 - MARNA DNA Mariner -254 332 48 2358 77 0 0 chr20 45474466 45474777 -26679105 + AluY SINE Alu 1 311 0 620 254 76 63 chr20 45474893 45475308 -26678574 - L1MC4a LINE L1 -109 6012 5591 882 263 16 12 chr20 45475461 45475704 -26678178 - LTR16B LTR ERVL -3 461 218 258 191 0 0 chr20 45475828 45475870 -26678012 - LTR16A LTR ERVL -407 43 2 2042 113 0 49 chr20 45476005 45476334 -26677548 - AluSq SINE Alu 0 313 1 322 333 18 0 chr20 45478629 45478740 -26675142 + MIR3 SINE MIR 77 189 -19 260 349 65 29 chr20 45478754 45479061 -26674821 - L2 LINE L2 -339 2975 2658 486 313 127 50 chr20 45479063 45479848 -26674034 - L2 LINE L2 -886 2428 1583 197 234 149 43 chr20 45479940 45480034 -26673848 + L2 LINE L2 3119 3222 -91 705 231 58 44 chr20 45480040 45480265 -26673617 + L2 LINE L2 3084 3311 -2 351 245 0 33 chr20 45480308 45480419 -26673463 + GA-rich Low_complexity Low_complexity 2 106 -73 2127 121 0 6 chr20 45480419 45480732 -26673150 + AluSx SINE Alu 1 311 -1 351 245 0 33 chr20 45480732 45480804 -26673078 + GA-rich Low_complexity Low_complexity 106 179 0 461 316 58 23 chr20 45480877 45481051 -26672831 - MIR SINE MIR -34 228 49 439 191 287 0 chr20 45482024 45482139 -26671743 - MIR SINE MIR -7 255 108 296 252 203 49 chr20 45482659 45482782 -26671100 - MIR3 SINE MIR -55 153 12 654 298 18 18 chr20 45483002 45483227 -26670655 + L2 LINE L2 2865 3089 -224 827 239 33 5 chr20 45483229 45483413 -26670469 - MER5A DNA MER1_type 0 189 1 623 268 33 47 chr20 45483423 45483636 -26670246 + L2 LINE L2 3104 3313 0 1038 162 10 13 chr20 45483697 45484004 -26669878 + (TGGA)n Simple_repeat Simple_repeat 4 307 0 215 208 0 21 chr20 45484290 45484338 -26669544 + CT-rich Low_complexity Low_complexity 3 49 0 191 402 71 6 chr20 45484623 45484792 -26669090 - L2 LINE L2 -1921 1393 1214 1136 181 143 3 chr20 45484855 45485087 -26668795 - MLT1D LTR MaLR -2 503 248 255 157 0 0 chr20 45485099 45485150 -26668732 + CT-rich Low_complexity Low_complexity 1 51 0 296 237 11 118 chr20 45485387 45485480 -26668402 + MIR SINE MIR 76 145 -63 * 388 275 211 0 chr20 45485477 45485619 -26668263 - MIR SINE MIR -3 259 88 316 315 150 31 chr20 45485671 45485957 -26667925 + L2 LINE L2 877 1196 -2118 224 233 155 9 chr20 45486013 45486129 -26667753 - L2 LINE L2 -557 2757 2625 2204 132 30 48 chr20 45486192 45486563 -26667319 - THE1B LTR MaLR 0 364 1 269 330 22 0 chr20 45486661 45486752 -26667130 + MIR SINE MIR 41 133 -75 2312 148 3 0 chr20 45487372 45487737 -26666145 + MER47A DNA MER2_type 1 366 0 1645 255 56 7 chr20 45489225 45489633 -26664249 - MLT1J2 LTR MaLR -2 448 21 183 314 59 0 chr20 45489683 45489734 -26664148 + L2 LINE L2 3138 3191 -81 180 281 94 0 chr20 45490066 45490130 -26663752 - MIR SINE MIR -75 187 118 745 250 11 106 chr20 45490459 45490723 -26663159 + MER102a DNA MER1_type 92 330 0 390 298 97 0 chr20 45490769 45490893 -26662989 - L2 LINE L2 0 3272 3137 1067 260 99 6 chr20 45491066 45491378 -26662504 + LTR16C LTR ERVL 151 491 0 1910 133 0 0 chr20 45492260 45492714 -26661168 + AluSq SINE Alu 1 454 0 22 0 0 0 chr20 45493755 45493777 -26660105 + AT_rich Low_complexity Low_complexity 1 22 0 2010 127 7 0 chr20 45493857 45494156 -26659726 + AluSx SINE Alu 12 312 0 1409 217 76 37 chr20 45494678 45495116 -26658766 - MER66A LTR ERV1 0 478 125 348 24 0 0 chr20 45495465 45495506 -26658376 + (CA)n Simple_repeat Simple_repeat 1 41 0 1213 276 98 40 chr20 45496014 45496817 -26657065 + HAL1b LINE L1 37 886 -462 22 0 0 0 chr20 45496894 45496916 -26656966 + AT_rich Low_complexity Low_complexity 1 22 0 2231 80 0 3 chr20 45496920 45497206 -26656676 + AluSc SINE Alu 1 285 -24 264 237 97 21 chr20 45497395 45497488 -26656394 + LTR67 LTR ERVL 77 176 -381 * 753 223 244 4 chr20 45497408 45497637 -26656245 + MLT1J LTR MaLR 92 375 -136 3471 130 15 13 chr20 45497673 45497796 -26656086 - MER1A DNA MER1_type -2173 527 406 1844 148 10 13 chr20 45497796 45498106 -26655776 - AluSx SINE Alu -1 311 3 3471 130 15 13 chr20 45498106 45498505 -26655377 - MER1A DNA MER1_type -2294 406 4 2185 136 63 0 chr20 45498593 45498976 -26654906 + L1MB4 LINE L1 5774 6180 0 857 156 120 36 chr20 45499091 45499283 -26654599 - MER3 DNA MER1_type 0 209 2 675 327 156 45 chr20 45499294 45499450 -26654432 + L2 LINE L2 2257 2394 -920 2067 102 27 7 chr20 45499450 45499743 -26654139 + AluSx SINE Alu 1 299 -13 675 327 156 45 chr20 45499743 45500188 -26653694 + L2 LINE L2 2394 2925 -389 369 0 0 0 chr20 45500405 45500446 -26653436 + (TG)n Simple_repeat Simple_repeat 1 41 0 252 246 82 0 chr20 45500494 45500555 -26653327 + L2 LINE L2 3210 3275 -38 517 241 152 25 chr20 45501679 45501837 -26652045 + MER5A DNA MER1_type 9 186 -3 276 371 29 6 chr20 45502029 45502199 -26651683 - MIR SINE MIR -12 250 77 1137 259 50 20 chr20 45502354 45502752 -26651130 - LTR16A1 LTR ERVL -30 427 18 553 249 11 0 chr20 45502765 45502942 -26650940 + (TG)n Simple_repeat Simple_repeat 2 180 0 1114 213 30 0 chr20 45503488 45503685 -26650197 + MIR SINE MIR 36 238 -24 203 365 0 0 chr20 45503652 45503715 -26650167 + L2 LINE L2 3251 3313 0 * 181 161 0 0 chr20 45504088 45504119 -26649763 + MER5A DNA MER1_type 21 51 -138 1800 156 30 73 chr20 45504124 45504289 -26649593 + MLT1B LTR MaLR 36 207 -183 2172 112 0 0 chr20 45504289 45504592 -26649290 + AluSx SINE Alu 1 303 -9 1800 156 30 73 chr20 45504592 45504797 -26649085 + MLT1B LTR MaLR 207 390 0 430 311 62 0 chr20 45504801 45504962 -26648920 - MIR SINE MIR -25 237 67 4105 130 24 13 chr20 45505333 45505970 -26647912 + LTR9B LTR ERV1 1 644 0 229 176 11 121 chr20 45506412 45506503 -26647379 - L1ME4a LINE L1 -42 6079 5999 311 294 172 22 chr20 45506682 45506862 -26647020 + MLT1J LTR MaLR 100 306 -205 466 260 46 29 chr20 45506972 45507145 -26646737 + MLT1J LTR MaLR 328 503 -8 466 287 25 42 chr20 45507147 45507384 -26646498 - L1ME4a LINE L1 -272 5849 5617 613 291 52 0 chr20 45507599 45507771 -26646111 + MIR SINE MIR 82 262 0 727 338 90 42 chr20 45507771 45507999 -26645883 - HAL1b LINE L1 -549 799 584 2069 106 0 0 chr20 45507999 45508312 -26645570 - AluSc SINE Alu 0 313 1 727 338 90 42 chr20 45508312 45508636 -26645246 - HAL1b LINE L1 -764 584 219 219 227 0 0 chr20 45508653 45508697 -26645185 + (CTG)n Simple_repeat Simple_repeat 1 44 0 396 327 40 70 chr20 45508874 45509073 -26644809 + L2 LINE L2 2627 2819 -495 460 317 161 5 chr20 45509361 45509560 -26644322 - MIR SINE MIR -13 249 20 453 277 107 45 chr20 45509849 45509917 -26643965 + MLT1J2 LTR MaLR 213 275 -175 1887 94 0 4 chr20 45509917 45510171 -26643711 + AluSc SINE Alu 36 288 -21 453 277 107 45 chr20 45510171 45510326 -26643556 + MLT1J2 LTR MaLR 275 450 0 327 313 35 9 chr20 45510433 45510548 -26643334 + MIR3 SINE MIR 46 163 -45 518 297 26 0 chr20 45511014 45511169 -26642713 - LTR33 LTR ERVL -362 159 1 296 301 164 48 chr20 45511211 45511357 -26642525 + L2 LINE L2 3109 3271 -1 825 310 5 0 chr20 45512050 45512234 -26641648 + MER91A DNA MER1_type 1 185 -11 249 267 93 47 chr20 45513134 45513220 -26640662 + MIR SINE MIR 5 94 -168 2061 184 73 21 chr20 45513220 45513656 -26640226 - LTR2B LTR ERV1 0 490 32 361 273 151 14 chr20 45513871 45514010 -26639872 - MIR3 SINE MIR -29 179 22 315 278 60 49 chr20 45514344 45514630 -26639252 + L1ME1 LINE L1 5759 5916 -250 264 164 82 33 chr20 45514958 45515019 -26638863 + L2 LINE L2 3249 3312 -1 374 251 71 55 chr20 45515099 45515282 -26638600 - L2 LINE L2 -655 2659 2474 2401 134 91 5 chr20 45515686 45516080 -26637802 - MSTA LTR MaLR 0 428 1 1128 127 0 0 chr20 45516080 45516238 -26637644 + FRAM SINE Alu 11 168 -8 2098 105 0 10 chr20 45516238 45516534 -26637348 + AluY SINE Alu 1 293 -18 1966 192 43 45 chr20 45517372 45517878 -26636004 + Charlie4a DNA MER1_type 1 505 -3 1359 227 125 68 chr20 45518027 45518570 -26635312 + MER77 LTR ERV1 50 673 -4 342 281 10 0 chr20 45518744 45518840 -26635042 - MER5A DNA MER1_type -83 106 10 271 287 91 79 chr20 45519713 45519978 -26633904 + MLT1I LTR MaLR 49 316 -93 283 128 0 29 chr20 45520028 45520084 -26633798 + MLT1H LTR MaLR 507 549 0 462 318 32 32 chr20 45520550 45520704 -26633178 + L2 LINE L2 3117 3270 -2 260 276 9 0 chr20 45520732 45520837 -26633045 + GA-rich Low_complexity Low_complexity 3 108 0 201 132 0 0 chr20 45520855 45520893 -26632989 + (TGGA)n Simple_repeat Simple_repeat 1 38 0 754 243 32 0 chr20 45521419 45521604 -26632278 + MIR SINE MIR 43 233 -29 1468 181 48 7 chr20 45521604 45521874 -26632008 + LTR32 LTR ERVL 11 291 -180 1929 86 43 13 chr20 45521916 45521986 -26631896 + L1MA2 LINE L1 5994 6060 -244 1525 157 61 7 chr20 45521986 45522266 -26631616 + AluSx SINE Alu 1 295 -17 1929 86 43 13 chr20 45522266 45522497 -26631385 + L1MA2 LINE L1 6060 6304 0 478 228 22 0 chr20 45522546 45522638 -26631244 + LTR32 LTR ERVL 259 352 -119 245 184 61 0 chr20 45522681 45522730 -26631152 + LTR32 LTR ERVL 317 368 -103 830 169 20 7 chr20 45522734 45522882 -26631000 + LTR32 LTR ERVL 322 471 0 2165 99 3 3 chr20 45523663 45523965 -26629917 - AluSg SINE Alu -8 302 1 244 313 116 9 chr20 45524124 45524236 -26629646 + L3 LINE CR1 1448 1571 -6 337 211 28 0 chr20 45524570 45524641 -26629241 + MIR SINE MIR 58 130 -78 408 291 63 60 chr20 45524649 45524951 -26628931 - MLT1I LTR MaLR -2 407 105 460 288 186 44 chr20 45525177 45525451 -26628431 - L2 LINE L2 -10 3303 2991 609 241 0 8 chr20 45525483 45525616 -26628266 + FLAM_A SINE Alu 11 142 0 291 357 28 11 chr20 45525622 45525804 -26628078 - L2 LINE L2 -284 2988 2804 490 298 13 53 chr20 45526163 45526314 -26627568 + MIR3 SINE MIR 31 175 -33 230 382 15 8 chr20 45526620 45526751 -26627131 - L3 LINE CR1 -20 1557 1426 286 226 16 0 chr20 45526765 45526827 -26627055 + L2 LINE L2 3209 3271 -1 638 242 12 24 chr20 45526963 45527128 -26626754 - LTR16C LTR ERVL -53 438 276 1148 171 92 40 chr20 45527132 45527361 -26626521 + MER33 DNA MER1_type 5 255 -2330 2149 119 3 0 chr20 45527361 45527672 -26626210 - AluSx SINE Alu 0 312 1 1148 171 92 40 chr20 45527672 45527746 -26626136 + MER33 DNA MER1_type 255 324 0 774 270 53 0 chr20 45527755 45527944 -26625938 - LTR16C LTR ERVL -219 272 74 266 291 68 34 chr20 45528035 45528183 -26625699 - L3 LINE CR1 -335 1242 1090 202 268 14 28 chr20 45528458 45528529 -26625353 - L2 LINE L2 -1884 1430 1361 331 278 21 98 chr20 45528779 45528952 -26624930 - MIR SINE MIR -73 135 30 495 238 70 86 chr20 45529190 45529434 -26624448 + MLT1J1 LTR MaLR 207 446 0 708 188 0 0 chr20 45529442 45529554 -26624328 - LTR53 LTR ERVL -406 113 2 1639 166 69 77 chr20 45530806 45530872 -26623010 - MLT1B LTR MaLR -2 388 323 1887 156 3 3 chr20 45530872 45531180 -26622702 - AluSx SINE Alu -2 310 3 1639 166 69 77 chr20 45531180 45531504 -26622378 - MLT1B LTR MaLR -67 323 1 604 321 170 16 chr20 45531721 45532092 -26621790 + L3 LINE CR1 1085 1512 -65 339 25 0 0 chr20 45532311 45532351 -26621531 + (CA)n Simple_repeat Simple_repeat 1 40 0 1219 207 115 17 chr20 45532508 45532949 -26620933 + MLT1D LTR MaLR 27 505 0 430 289 114 9 chr20 45532949 45533160 -26620722 + MIR SINE MIR 20 252 -10 620 147 0 35 chr20 45533647 45533763 -26620119 - AluJo SINE Alu -25 287 176 421 207 17 69 chr20 45533779 45533895 -26619987 - AluJo SINE Alu -118 194 85 1564 151 43 7 chr20 45534061 45534339 -26619543 - L1MB5 LINE L1 -94 6080 5793 319 171 86 0 chr20 45534339 45534409 -26619473 + MER45A DNA AcHobo 102 177 -1 262 331 21 21 chr20 45534444 45534586 -26619296 + L2 LINE L2 2625 2766 -548 2151 93 3 7 chr20 45535160 45535451 -26618431 - AluSp SINE Alu -22 291 2 326 256 0 23 chr20 45536225 45536311 -26617571 + MIR3 SINE MIR 104 187 -21 332 131 0 16 chr20 45536318 45536379 -26617503 + (CA)n Simple_repeat Simple_repeat 2 61 0 2957 124 35 43 chr20 45536822 45537802 -26616080 - L1PA7 LINE L1 -15 6139 5184 1114 193 134 26 chr20 45538374 45538680 -26615202 + MER58B DNA MER1_type 1 339 -2 643 154 14 144 chr20 45538839 45539047 -26614835 - L1MC5 LINE L1 -54 7907 7727 2184 108 3 13 chr20 45539303 45539619 -26614263 + AluSq SINE Alu 1 313 0 2036 128 0 0 chr20 45539979 45540275 -26613607 + AluSg SINE Alu 1 296 -14 2108 156 47 18 chr20 45540389 45540731 -26613151 + MLT2C1 LTR ERVL 3 359 -38 231 36 0 0 chr20 45540731 45540759 -26613123 + (CA)n Simple_repeat Simple_repeat 1 28 0 2108 156 47 18 chr20 45540759 45540800 -26613082 + MLT2C1 LTR ERVL 359 397 0 633 113 57 128 chr20 45540861 45541040 -26612842 + FLAM_C SINE Alu 1 169 0 822 159 38 51 chr20 45541048 45541205 -26612677 - MIR SINE MIR 0 262 108 180 111 0 0 chr20 45542616 45542643 -26611239 + (TTCCC)n Simple_repeat Simple_repeat 5 31 0 320 299 11 0 chr20 45542657 45542744 -26611138 - L2 LINE L2 -16 3256 3169 4223 70 34 26 chr20 45542768 45542857 -26611025 + LTR10C LTR ERV1 1 88 -503 5668 31 1 3 chr20 45542857 45543509 -26610373 + SVA Other Other 732 1382 -4 4223 70 34 26 chr20 45543509 45544005 -26609877 + LTR10C LTR ERV1 88 591 0 676 179 45 26 chr20 45544055 45544211 -26609671 - L2 LINE L2 0 3313 3155 1833 144 128 50 chr20 45544352 45544749 -26609133 + MSTA LTR MaLR 1 428 0 317 365 55 16 chr20 45544805 45545117 -26608765 - L2 LINE L2 -437 2877 2554 1448 183 72 85 chr20 45545172 45545561 -26608321 - MLT1B LTR MaLR -4 386 3 2220 127 26 40 chr20 45545561 45545939 -26607943 + MER83C LTR ERV1 1 373 0 2173 107 3 0 chr20 45545960 45546258 -26607624 + AluSx SINE Alu 2 300 -12 194 264 0 19 chr20 45546682 45546735 -26607147 - MER5A DNA MER1_type -34 155 104 1617 140 22 7 chr20 45547199 45547477 -26606405 - AluJo SINE Alu -22 290 9 5395 67 89 11 chr20 45547493 45548685 -26605197 - SVA Other Other -954 1386 26 201 39 0 0 chr20 45548697 45548723 -26605159 + (GGGAGA)n Simple_repeat Simple_repeat 2 27 0 2212 97 3 0 chr20 45548746 45549046 -26604836 - AluSp SINE Alu -12 301 1 1391 228 14 7 chr20 45549244 45549529 -26604353 + LTR16C LTR ERVL 205 491 0 1980 92 0 4 chr20 45549662 45549935 -26603947 - AluY SINE Alu -1 310 39 3119 177 30 25 chr20 45550090 45550728 -26603154 + L1MB7 LINE L1 5544 6184 0 1632 167 7 7 chr20 45550806 45551099 -26602783 - AluJo SINE Alu -19 293 1 2003 117 0 0 chr20 45551503 45551793 -26602089 - AluSg SINE Alu -20 290 1 254 262 206 9 chr20 45551821 45551928 -26601954 + MIR SINE MIR 129 256 -6 278 308 58 0 chr20 45552019 45552139 -26601743 - MIR3 SINE MIR -4 204 78 551 268 100 26 chr20 45552691 45552881 -26601001 + MIR SINE MIR 49 252 -10 1071 292 79 14 chr20 45553119 45553485 -26600397 + LTR16C LTR ERVL 1 390 -101 1521 208 87 77 chr20 45553509 45554058 -26599824 + MER34B LTR ERV1 11 565 0 259 218 207 0 chr20 45554058 45554128 -26599754 + LTR16C LTR ERVL 401 488 -3 556 264 93 101 chr20 45554143 45554737 -26599145 + L2 LINE L2 2268 2856 -458 1686 177 7 7 chr20 45554817 45555117 -26598765 - AluJb SINE Alu -12 300 1 329 269 0 0 chr20 45555330 45555397 -26598485 + L2 LINE L2 3205 3271 -1 482 287 77 21 chr20 45556014 45556157 -26597725 - L2 LINE L2 0 3272 3122 1439 166 116 152 chr20 45556260 45556359 -26597523 + MER67D LTR ERV1 1 102 -412 1872 125 0 4 chr20 45556359 45556639 -26597243 - AluSx SINE Alu -14 298 20 1439 166 116 152 chr20 45556639 45556955 -26596927 + MER67D LTR ERV1 102 396 -118 2312 73 0 19 chr20 45556955 45557272 -26596610 + AluY SINE Alu 1 311 0 1439 166 116 152 chr20 45557272 45557374 -26596508 + MER67D LTR ERV1 396 500 -14 2265 216 60 41 chr20 45559595 45560177 -26593705 - MLT1E LTR MaLR 0 593 1 400 272 130 0 chr20 45560857 45561019 -26592863 + Tigger8 DNA MER2_type 129 311 -355 2070 110 0 10 chr20 45561304 45561604 -26592278 - AluSx SINE Alu -15 297 1 972 111 0 0 chr20 45561604 45561739 -26592143 - AluSp SINE Alu -178 135 1 246 307 193 7 chr20 45561856 45562006 -26591876 + L2 LINE L2 2677 2854 -460 2346 99 30 51 chr20 45562011 45562188 -26591694 - THE1B LTR MaLR 0 364 185 2261 80 0 13 chr20 45562188 45562489 -26591393 + AluSq SINE Alu 5 301 -12 2346 99 30 51 chr20 45562489 45562683 -26591199 - THE1B LTR MaLR -179 185 1 1593 227 25 0 chr20 45562706 45563028 -26590854 + MER58B DNA MER1_type 2 331 -10 214 285 69 69 chr20 45563032 45563176 -26590706 + L2 LINE L2 2865 3008 -305 267 230 170 79 chr20 45563212 45563377 -26590505 + L2 LINE L2 3134 3313 0 22 35 0 0 chr20 45563542 45563571 -26590311 + AT_rich Low_complexity Low_complexity 1 29 0 2193 78 0 0 chr20 45563984 45564290 -26589592 - AluY SINE Alu 0 306 1 298 253 171 80 chr20 45564598 45564961 -26588921 - L2 LINE L2 -20 3252 2857 638 227 171 32 chr20 45565167 45565383 -26588499 + MIR SINE MIR 14 259 -3 349 274 98 0 chr20 45566454 45566556 -26587326 - MER58A DNA MER1_type 0 113 2 783 161 0 0 chr20 45566593 45566711 -26587171 + FLAM_C SINE Alu 1 118 -15 422 273 28 74 chr20 45566747 45566923 -26586959 - L1ME3A LINE L1 -52 6118 5951 268 366 35 35 chr20 45566983 45567215 -26586667 + MIR SINE MIR 31 262 0 207 100 0 0 chr20 45567614 45567644 -26586238 + (T)n Simple_repeat Simple_repeat 1 30 0 464 315 28 7 chr20 45568103 45568246 -26585636 - MIR SINE MIR -29 233 88 1234 259 4 0 chr20 45568378 45568648 -26585234 + LTR16C LTR ERVL 190 460 -31 548 239 168 38 chr20 45568693 45568902 -26584980 - MIR SINE MIR -14 248 13 2130 236 90 34 chr20 45569168 45569905 -26583977 + L2 LINE L2 2200 2977 -337 318 168 15 153 chr20 45569932 45570063 -26583819 + MER94 DNA DNA 1 113 -21 450 236 35 86 chr20 45570187 45570271 -26583611 + L2 LINE L2 3149 3221 -92 1735 141 0 39 chr20 45570271 45570577 -26583305 - AluJb SINE Alu -18 294 1 450 236 35 86 chr20 45570577 45570666 -26583216 + L2 LINE L2 3221 3313 0 370 323 44 19 chr20 45571227 45571385 -26582497 + MIR3 SINE MIR 37 198 -10 22 35 0 0 chr20 45571793 45571822 -26582060 + AT_rich Low_complexity Low_complexity 1 29 0 5904 135 47 13 chr20 45571822 45573035 -26580847 - L1MA8 LINE L1 0 6291 5028 3106 141 2 0 chr20 45573029 45573524 -26580358 + L1MA8 LINE L1 4555 5050 -1096 * 319 271 8 85 chr20 45574311 45574440 -26579442 - L1ME4a LINE L1 -102 6019 5901 241 280 140 85 chr20 45575035 45575235 -26578647 - L2 LINE L2 0 3272 3062 293 266 65 29 chr20 45575295 45575434 -26578448 - L1ME4a LINE L1 -12 6109 5966 2158 113 0 3 chr20 45575766 45576067 -26577815 - AluSp SINE Alu -13 300 1 2296 74 3 22 chr20 45576311 45576622 -26577260 - AluSp SINE Alu -8 305 1 2061 136 0 0 chr20 45576890 45577192 -26576690 + AluSx SINE Alu 1 302 -10 381 307 22 7 chr20 45577438 45577575 -26576307 - Charlie8 DNA MER1_type -2183 234 96 431 280 91 7 chr20 45577955 45578098 -26575784 - MIR SINE MIR -45 217 63 259 274 0 27 chr20 45579103 45579176 -26574706 - L2 LINE L2 -2 3311 3241 317 261 243 0 chr20 45580293 45580404 -26573478 - MIR SINE MIR -78 184 47 183 333 35 69 chr20 45580428 45580572 -26573310 - L2 LINE L2 -183 3089 2951 647 200 53 20 chr20 45580828 45580978 -26572904 - MER69A DNA AcHobo 0 177 23 268 378 13 7 chr20 45582126 45582277 -26571605 + L3 LINE CR1 879 1030 -547 255 79 0 0 chr20 45582373 45582411 -26571471 + (TAAA)n Simple_repeat Simple_repeat 3 40 0 269 320 200 0 chr20 45582416 45582541 -26571341 - L2 LINE L2 -21 3251 3102 348 280 80 27 chr20 45582576 45582853 -26571029 - L2 LINE L2 -290 2982 2688 1317 136 15 4 chr20 45582860 45583088 -26570794 - L1MB8 LINE L1 -63 6115 5886 228 243 207 18 chr20 45583677 45583788 -26570094 + L3 LINE CR1 1410 1541 -36 212 229 0 0 chr20 45584173 45584221 -26569661 + L2 LINE L2 3225 3272 0 387 282 106 6 chr20 45584558 45584728 -26569154 + MIR SINE MIR 21 207 -55 1467 253 74 40 chr20 45585938 45586467 -26567415 + MLT1H LTR MaLR 1 547 -2 474 188 0 0 chr20 45587107 45587203 -26566679 + (CA)n Simple_repeat Simple_repeat 2 97 0 288 255 7 5 chr20 45587286 45587370 -26566512 + L1ME LINE L1 5666 5752 -410 256 320 41 8 chr20 45588640 45588762 -26565120 - MIR3 SINE MIR -25 183 58 416 299 47 0 chr20 45589123 45589250 -26564632 - MIR SINE MIR -71 191 59 320 294 159 12 chr20 45589512 45589682 -26564200 - MIR SINE MIR -21 241 47 234 220 0 0 chr20 45589838 45589897 -26563985 + (TG)n Simple_repeat Simple_repeat 2 60 0 1018 241 14 0 chr20 45590142 45590362 -26563520 - MER58A DNA MER1_type -1 223 1 430 270 33 26 chr20 45590368 45590520 -26563362 + MIR3 SINE MIR 19 171 -37 423 280 40 24 chr20 45591242 45591367 -26562515 - L2 LINE L2 -2 3311 3185 243 292 85 23 chr20 45592078 45592208 -26561674 - L1ME4a LINE L1 -24 6097 5960 704 254 109 80 chr20 45592361 45592567 -26561315 - L1MC5 LINE L1 -55 7906 7708 1005 196 4 52 chr20 45592567 45592796 -26561086 + MER20 DNA MER1_type 1 218 -1 704 254 109 80 chr20 45592796 45592936 -26560946 - L1MC5 LINE L1 -253 7708 7574 2797 123 58 13 chr20 45592936 45593400 -26560482 - MER31A LTR ERV1 0 485 1 704 254 109 80 chr20 45593400 45593679 -26560203 - L1MC5 LINE L1 -387 7574 7305 957 160 27 37 chr20 45593679 45593867 -26560015 + MER5A DNA MER1_type 1 186 -3 704 254 109 80 chr20 45593867 45593881 -26560001 - L1MC5 LINE L1 -656 7305 7293 2519 56 0 10 chr20 45593881 45594183 -26559699 - AluY SINE Alu -12 299 1 704 254 109 80 chr20 45594183 45594395 -26559487 - L1MC5 LINE L1 -668 7293 7027 681 200 34 11 chr20 45594403 45594584 -26559298 - L1ME3 LINE L1 0 6164 5976 357 267 134 71 chr20 45595231 45595979 -26557903 - L1M4 LINE L1 -1711 4435 3641 2891 10 0 0 chr20 45597729 45598036 -26555846 + AluYa5 SINE Alu 1 307 -4 211 264 28 14 chr20 45598653 45598725 -26555157 + (CATATA)n Simple_repeat Simple_repeat 6 78 0 2561 60 0 0 chr20 45600207 45600505 -26553377 - AluY SINE Alu -13 298 1 241 261 9 126 chr20 45600659 45600770 -26553112 - MLT1J2 LTR MaLR -62 388 291 2271 118 3 6 chr20 45601266 45601579 -26552303 - AluSx SINE Alu 0 312 1 2071 139 0 13 chr20 45602347 45602648 -26551234 + AluSq SINE Alu 1 297 -16 273 216 165 21 chr20 45602896 45602993 -26550889 + L2 LINE L2 3203 3313 0 276 234 31 0 chr20 45603764 45603828 -26550054 - MIR SINE MIR -59 149 84 834 238 134 45 chr20 45603889 45604225 -26549657 - MLT1J LTR MaLR -1 510 145 2479 151 14 28 chr20 45604451 45604493 -26549389 - MSTB LTR MaLR 0 426 385 2202 99 3 3 chr20 45604493 45604813 -26549069 + AluSq SINE Alu 1 320 0 2479 151 14 28 chr20 45604813 45605201 -26548681 - MSTB LTR MaLR -41 385 1 230 309 37 0 chr20 45605338 45605419 -26548463 - L2 LINE L2 -2 3270 3187 674 194 0 0 chr20 45605439 45605563 -26548319 + MER5A DNA MER1_type 1 124 -65 495 238 32 24 chr20 45605620 45605746 -26548136 + MIR SINE MIR 6 132 -130 2325 248 81 31 chr20 45606001 45606800 -26547082 + L1ME3A LINE L1 5327 6165 -5 2528 55 0 0 chr20 45607076 45607369 -26546513 + AluY SINE Alu 1 293 -18 544 204 9 9 chr20 45607543 45607651 -26546231 + FRAM SINE Alu 3 110 -66 421 250 20 66 chr20 45608810 45608909 -26544973 + MIR SINE MIR 51 142 -120 2243 85 7 10 chr20 45608909 45609202 -26544680 + AluSc SINE Alu 1 292 -17 421 250 20 66 chr20 45609202 45609254 -26544628 + MIR SINE MIR 142 195 -67 669 226 195 46 chr20 45609390 45609585 -26544297 + MER58A DNA MER1_type 1 224 0 558 278 126 50 chr20 45610347 45610649 -26543233 + MLT1H LTR MaLR 3 327 -222 280 236 0 0 chr20 45611531 45611586 -26542296 + tRNA-Ile-ATT tRNA tRNA 10 64 -13 182 346 87 8 chr20 45611798 45611925 -26541957 - MIR3 SINE MIR -68 140 4 1090 182 16 10 chr20 45611963 45612155 -26541727 - MER20 DNA MER1_type -23 196 4 257 303 0 0 chr20 45612599 45612675 -26541207 + MIR SINE MIR 187 262 0 932 209 26 22 chr20 45613138 45613368 -26540514 - MIR SINE MIR -27 235 5 2424 82 0 19 chr20 45616074 45616389 -26537493 - AluSg SINE Alu -1 309 1 569 295 21 5 chr20 45616970 45617160 -26536722 - L1ME3A LINE L1 -5 6165 5973 431 295 106 52 chr20 45617165 45617225 -26536657 + L2 LINE L2 2686 2741 -531 1795 179 69 45 chr20 45617225 45617645 -26536237 + MSTB1 LTR MaLR 3 432 0 431 295 106 52 chr20 45617645 45618092 -26535790 + L2 LINE L2 2741 3222 -50 1165 246 122 40 chr20 45619097 45619647 -26534235 - MLT1G1 LTR MaLR 0 595 1 2305 98 3 0 chr20 45620557 45620852 -26533030 + AluSp SINE Alu 1 296 -17 24 32 0 0 chr20 45620853 45620884 -26532998 + AT_rich Low_complexity Low_complexity 1 31 0 222 174 0 0 chr20 45620914 45620960 -26532922 + CT-rich Low_complexity Low_complexity 1 46 0 2360 93 3 3 chr20 45620960 45621271 -26532611 - AluSq SINE Alu -2 311 1 191 364 17 8 chr20 45621420 45621538 -26532344 - MIR3 SINE MIR -86 122 4 2006 150 3 0 chr20 45621947 45622240 -26531642 + AluSx SINE Alu 1 294 -18 560 189 110 0 chr20 45622364 45622491 -26531391 - MER5A DNA MER1_type 0 189 49 321 228 25 0 chr20 45622788 45622867 -26531015 - MIR SINE MIR -62 200 120 397 312 163 5 chr20 45623029 45623244 -26530638 - MIR SINE MIR -12 250 2 827 151 66 34 chr20 45623816 45623869 -26530013 - MER106B DNA MER1_type 0 236 186 243 0 0 0 chr20 45623869 45623896 -26529986 + (TTA)n Simple_repeat Simple_repeat 1 27 0 827 151 66 34 chr20 45623896 45624058 -26529824 - MER106B DNA MER1_type -50 186 3 590 276 30 10 chr20 45624736 45624939 -26528943 - LTR16C LTR ERVL 0 491 285 365 39 0 19 chr20 45625321 45625373 -26528509 + (TG)n Simple_repeat Simple_repeat 1 51 0 1176 177 150 74 chr20 45625447 45625786 -26528096 + MLT1A1 LTR MaLR 1 365 0 464 276 116 27 chr20 45626082 45626307 -26527575 - MIR SINE MIR -16 246 2 219 295 42 32 chr20 45626372 45626467 -26527415 - MIR SINE MIR -56 206 111 205 340 52 10 chr20 45626874 45626971 -26526911 + L2 LINE L2 3081 3181 -91 1945 148 7 13 chr20 45627247 45627552 -26526330 - AluSx SINE Alu -8 304 2 184 409 0 0 chr20 45628190 45628305 -26525577 + MIR SINE MIR 23 137 -71 189 74 0 0 chr20 45629081 45629108 -26524774 + (A)n Simple_repeat Simple_repeat 1 27 0 518 208 138 0 chr20 45629265 45629395 -26524487 - MIR SINE MIR -113 149 2 588 288 114 0 chr20 45629996 45630180 -26523702 + MIR SINE MIR 36 240 -22 274 355 25 1 chr20 45630286 45630430 -26523452 - MIR SINE MIR -47 161 37 554 205 23 16 chr20 45631400 45631707 -26522175 + GA-rich Low_complexity Low_complexity 1 309 0 573 170 19 42 chr20 45631747 45632061 -26521821 + GA-rich Low_complexity Low_complexity 1 306 0 260 219 164 39 chr20 45632226 45632354 -26521528 + MIR SINE MIR 48 191 -71 202 267 116 55 chr20 45632582 45632728 -26521154 + L2 LINE L2 2898 3052 -220 570 311 63 58 chr20 45632808 45632950 -26520932 - L2 LINE L2 -19 3294 3154 2459 91 7 0 chr20 45632950 45633259 -26520623 + AluSp SINE Alu 1 311 -2 2333 92 7 0 chr20 45633261 45633567 -26520315 + AluSc SINE Alu 1 308 -1 570 311 63 58 chr20 45633567 45634068 -26519814 - L2 LINE L2 -159 3154 2632 981 319 25 22 chr20 45634735 45635139 -26518743 - MLT1I LTR MaLR 0 409 5 334 278 32 79 chr20 45635383 45635599 -26518283 + LTR16C LTR ERVL 286 491 0 24 0 0 0 chr20 45635990 45636014 -26517868 + AT_rich Low_complexity Low_complexity 1 24 0 231 88 0 0 chr20 45636075 45636109 -26517773 + (TG)n Simple_repeat Simple_repeat 1 34 0 706 94 17 0 chr20 45636109 45636226 -26517656 + (GA)n Simple_repeat Simple_repeat 2 120 0 699 298 89 78 chr20 45636229 45636404 -26517478 - HAL1 LINE L1 -916 1591 1420 2174 95 17 10 chr20 45636404 45636698 -26517184 - AluSx SINE Alu -16 296 1 699 298 89 78 chr20 45636698 45637079 -26516803 - HAL1 LINE L1 -1087 1420 1021 2443 67 0 3 chr20 45637079 45637376 -26516506 + AluY SINE Alu 1 296 -15 699 298 89 78 chr20 45637376 45637590 -26516292 - HAL1 LINE L1 -1486 1021 811 420 287 43 21 chr20 45638411 45638599 -26515283 + MIR SINE MIR 71 262 0 242 162 0 0 chr20 45639227 45639264 -26514618 + MARNA DNA Mariner 159 195 -391 414 0 0 0 chr20 45639267 45639313 -26514569 + (CA)n Simple_repeat Simple_repeat 2 47 0 1640 160 59 0 chr20 45639472 45639779 -26514103 - L1MA5A LINE L1 -3 6294 5970 1922 150 37 0 chr20 45639983 45640283 -26513599 + AluSx SINE Alu 1 311 -1 1211 155 42 139 chr20 45640381 45640749 -26513133 + L1ME1 LINE L1 5834 6160 -2 2564 84 25 8 chr20 45641822 45642180 -26511702 + THE1B LTR MaLR 1 364 0 185 217 0 0 chr20 45642181 45642227 -26511655 + L2 LINE L2 3265 3310 -3 451 230 104 7 chr20 45642717 45642852 -26511030 - L1ME4a LINE L1 -7 6114 5967 2723 185 60 72 chr20 45642944 45643014 -26510868 + L1MB8 LINE L1 5453 5522 -656 2069 114 57 38 chr20 45643014 45643382 -26510500 + THE1C LTR MaLR 1 375 0 2723 185 60 72 chr20 45643382 45643988 -26509894 + L1MB8 LINE L1 5522 6134 -44 2088 112 7 0 chr20 45643988 45644273 -26509609 + AluSx SINE Alu 1 287 -25 462 36 0 0 chr20 45644273 45644329 -26509553 + (TA)n Simple_repeat Simple_repeat 2 57 0 2723 185 60 72 chr20 45644329 45644384 -26509498 + L1MB8 LINE L1 6132 6177 -1 3328 126 10 4 chr20 45644466 45644960 -26508922 - LOR1a LTR ERV1 0 497 1 497 293 121 40 chr20 45645388 45646057 -26507825 + L1M4 LINE L1 2122 2844 -3302 376 293 71 55 chr20 45646074 45646385 -26507497 + L1M4 LINE L1 3192 3507 -2639 333 314 118 57 chr20 45646443 45646672 -26507210 + L1M4 LINE L1 3587 3829 -2317 613 248 255 46 chr20 45646721 45647027 -26506855 - MLT1J2 LTR MaLR -69 381 67 257 229 10 52 chr20 45647085 45647181 -26506701 + L1M4 LINE L1 3840 3931 -2215 1110 290 25 3 chr20 45647207 45647524 -26506358 - MLT1I LTR MaLR 0 409 86 426 303 130 36 chr20 45647623 45648294 -26505588 + L1M4 LINE L1 3973 4706 -1440 297 208 0 0 chr20 45648428 45648500 -26505382 + GA-rich Low_complexity Low_complexity 1 72 0 221 261 193 94 chr20 45649453 45649805 -26504077 - L2 LINE L2 -1 3312 2926 222 345 124 34 chr20 45650537 45650917 -26502965 - L2 LINE L2 -468 2846 2433 285 263 59 59 chr20 45652905 45653023 -26500859 - MIR3 SINE MIR -39 169 52 * 310 264 0 23 chr20 45653005 45653092 -26500790 + MIR SINE MIR 40 124 -138 509 165 16 41 chr20 45653460 45653581 -26500301 - MER106B DNA MER1_type -4 1055 938 1758 163 7 11 chr20 45653593 45653876 -26500006 + AluJo SINE Alu 1 282 -30 366 254 16 24 chr20 45653975 45653998 -26499884 + (TA)n Simple_repeat Simple_repeat 2 24 -102 654 51 0 0 chr20 45653998 45654076 -26499806 - MADE1 DNA Mariner -2 78 1 366 254 16 24 chr20 45654076 45654178 -26499704 + (TA)n Simple_repeat Simple_repeat 24 126 0 2343 87 3 3 chr20 45655844 45656144 -26497738 - AluSp SINE Alu -13 300 1 943 204 11 0 chr20 45656237 45656418 -26497464 - MER5A DNA MER1_type -2 187 5 556 211 215 63 chr20 45656419 45656666 -26497216 - LTR16A1 LTR ERVL -71 386 89 6276 37 9 0 chr20 45656666 45657402 -26496480 - L1PA5 LINE L1 0 6154 5412 556 211 215 63 chr20 45657402 45657438 -26496444 - LTR16A1 LTR ERVL -368 89 60 240 321 0 0 chr20 45657573 45657626 -26496256 - Charlie8 DNA MER1_type -2364 53 1 2429 60 3 7 chr20 45659122 45659424 -26494458 - AluY SINE Alu -10 301 1 726 148 34 17 chr20 45659464 45659640 -26494242 + CT-rich Low_complexity Low_complexity 1 179 0 353 96 39 0 chr20 45659648 45659700 -26494182 + C-rich Low_complexity Low_complexity 4 57 0 1611 162 4 15 chr20 45659701 45659967 -26493915 - AluJo SINE Alu -49 263 1 235 146 0 0 chr20 45660069 45660110 -26493772 + L2 LINE L2 2712 2752 -562 2577 156 46 2 chr20 45660157 45660613 -26493269 - L1MB5 LINE L1 -8 6166 5691 1071 191 27 31 chr20 45660646 45660871 -26493011 - MER58A DNA MER1_type 0 224 1 345 282 36 18 chr20 45661680 45661790 -26492092 + MIR SINE MIR 37 148 -60 556 254 26 48 chr20 45662153 45662342 -26491540 + MLT1J2 LTR MaLR 24 208 -242 318 258 86 11 chr20 45662400 45662493 -26491389 + MLT1J2 LTR MaLR 342 441 -9 834 265 155 25 chr20 45663199 45663592 -26490290 - MLT1J2 LTR MaLR -6 444 1 390 145 0 0 chr20 45664085 45664147 -26489735 - 7SK RNA RNA -6 187 126 822 91 0 53 chr20 45664188 45664320 -26489562 - 7SK RNA RNA -68 125 1 301 242 22 11 chr20 45665275 45665366 -26488516 - MIR SINE MIR -135 127 36 1209 208 70 26 chr20 45665408 45665720 -26488162 - L1ME2 LINE L1 -22 6142 5817 355 282 65 0 chr20 45665914 45666038 -26487844 + MIR SINE MIR 131 262 0 405 136 0 0 chr20 45666523 45666589 -26487293 + (TCCA)n Simple_repeat Simple_repeat 2 67 0 216 250 0 0 chr20 45666590 45666642 -26487240 + (CCTA)n Simple_repeat Simple_repeat 1 52 0 547 228 78 24 chr20 45666649 45666816 -26487066 - L1ME2 LINE L1 0 6164 5989 240 236 35 0 chr20 45666843 45666908 -26486974 - L1ME1 LINE L1 -217 5947 5878 353 322 52 23 chr20 45666944 45667118 -26486764 - MIR SINE MIR -15 247 69 1741 226 19 3 chr20 45667118 45667477 -26486405 + MLT1A1 LTR MaLR 1 365 0 3568 178 39 86 chr20 45667481 45667690 -26486192 + MLT1A1-int LTR MaLR 5 222 -1329 1894 138 0 0 chr20 45667690 45667950 -26485932 - AluSx SINE Alu -52 260 1 3568 178 39 86 chr20 45667950 45668754 -26485128 + MLT1A1-int LTR MaLR 222 896 -655 388 224 11 17 chr20 45669213 45669392 -26484490 + CT-rich Low_complexity Low_complexity 1 178 0 398 317 49 0 chr20 45669658 45669800 -26484082 - L2 LINE L2 -1 3312 3164 684 171 43 13 chr20 45669948 45670135 -26483747 - L1MD3 LINE L1 -10 7985 6154 507 185 25 33 chr20 45670135 45670384 -26483498 + CT-rich Low_complexity Low_complexity 1 247 0 1283 216 68 14 chr20 45670404 45670696 -26483186 - L1MD2 LINE L1 -231 6128 5821 598 296 132 52 chr20 45670994 45671342 -26482540 - MLT1J2 LTR MaLR -1 449 74 230 325 25 0 chr20 45671565 45671645 -26482237 + MIR3 SINE MIR 95 176 -32 1886 175 0 13 chr20 45673061 45673375 -26480507 - AluJb SINE Alu -2 310 1 1125 199 158 35 chr20 45674476 45674787 -26479095 - L1MB7 LINE L1 -247 5927 5579 1037 238 16 12 chr20 45674776 45675032 -26478850 + L1MB7 LINE L1 5927 6183 -1 * 351 297 51 8 chr20 45675160 45675278 -26478604 + L2 LINE L2 3190 3312 -1 216 0 0 0 chr20 45675997 45676021 -26477861 + (T)n Simple_repeat Simple_repeat 1 24 0 816 270 91 89 chr20 45676358 45676909 -26476973 - MLT1K LTR MaLR -4 584 33 264 293 92 0 chr20 45676950 45677048 -26476834 - MIR SINE MIR -85 123 45 186 384 12 0 chr20 45677737 45677823 -26476059 - MIR SINE MIR -88 120 34 327 49 0 0 chr20 45678279 45678320 -26475562 + (TATG)n Simple_repeat Simple_repeat 4 44 0 420 259 159 16 chr20 45679730 45679919 -26473963 + MIR SINE MIR 47 262 0 231 146 0 0 chr20 45679919 45679960 -26473922 + (CAT)n Simple_repeat Simple_repeat 2 42 0 1991 67 104 4 chr20 45681089 45681357 -26472525 - AluY SINE Alu -16 295 1 243 268 120 63 chr20 45681464 45681606 -26472276 + L2 LINE L2 2683 2832 -482 1857 163 0 28 chr20 45681886 45682205 -26471677 + AluJo SINE Alu 3 312 0 185 156 0 0 chr20 45682257 45682289 -26471593 + MIR SINE MIR 217 248 -14 383 316 40 23 chr20 45682916 45683093 -26470789 - MIR SINE MIR -43 219 40 294 333 10 10 chr20 45683829 45683928 -26469954 + MIR3 SINE MIR 75 173 -35 349 333 27 27 chr20 45684063 45684246 -26469636 + MIR SINE MIR 80 262 0 203 220 0 34 chr20 45684247 45684306 -26469576 + CT-rich Low_complexity Low_complexity 4 60 0 250 244 39 0 chr20 45684868 45684946 -26468936 + (TGGG)n Simple_repeat Simple_repeat 2 82 0 363 316 181 5 chr20 45685491 45685684 -26468198 - MIR SINE MIR -16 246 20 1115 222 14 0 chr20 45685710 45685931 -26467951 - MER58A DNA MER1_type 0 224 1 356 273 49 39 chr20 45686379 45686534 -26467348 + MIR SINE MIR 5 169 -39 * 973 162 17 0 chr20 45686527 45686706 -26467176 - MER5A DNA MER1_type -7 182 1 190 279 0 44 chr20 45687105 45687173 -26466709 + MIR SINE MIR 197 261 -1 23 54 0 0 chr20 45687182 45687219 -26466663 + AT_rich Low_complexity Low_complexity 1 37 0 1896 183 0 0 chr20 45687576 45687888 -26465994 - AluSx SINE Alu 0 312 1 217 154 0 26 chr20 45688172 45688211 -26465671 + CT-rich Low_complexity Low_complexity 3 40 0 557 307 94 30 chr20 45688414 45689245 -26464637 - L1M4 LINE L1 -1351 4795 3912 1019 231 54 11 chr20 45689378 45689638 -26464244 - MER46C DNA MER2_type 0 338 68 373 243 10 19 chr20 45689644 45689747 -26464135 - LTR16A1 LTR ERVL 0 457 356 277 262 87 0 chr20 45689946 45690049 -26463833 - MER46C DNA MER2_type -226 112 1 190 310 184 0 chr20 45690477 45690564 -26463318 + L2 LINE L2 3210 3312 -1 723 242 0 32 chr20 45691251 45691408 -26462474 + FAM SINE Alu 1 152 -33 645 199 0 3 chr20 45692152 45692309 -26461573 + MER58A DNA MER1_type 27 224 0 551 66 53 0 chr20 45692959 45693035 -26460847 + MADE1 DNA Mariner 1 80 0 23 0 0 0 chr20 45693084 45693107 -26460775 + AT_rich Low_complexity Low_complexity 1 23 0 271 250 83 33 chr20 45693544 45693664 -26460218 + MIR SINE MIR 20 145 -117 367 245 65 50 chr20 45693723 45693862 -26460020 + MIR SINE MIR 8 148 -114 191 315 80 75 chr20 45694386 45694599 -26459283 + L3 LINE CR1 1216 1429 -148 21 0 0 0 chr20 45695155 45695176 -26458706 + AT_rich Low_complexity Low_complexity 1 21 0 718 195 0 65 chr20 45695270 45695424 -26458458 + MER3 DNA MER1_type 1 144 -65 285 309 21 0 chr20 45695461 45695558 -26458324 + MIR SINE MIR 57 155 -107 206 288 99 18 chr20 45695958 45696069 -26457813 + MIR SINE MIR 21 140 -122 1036 212 10 0 chr20 45696098 45696296 -26457586 - MLT1A1 LTR MaLR 0 365 166 1254 283 23 30 chr20 45696375 45696771 -26457111 + LTR16A LTR ERVL 52 444 -6 216 213 43 0 chr20 45697446 45697493 -26456389 + L2 LINE L2 3242 3290 -23 770 268 83 61 chr20 45697566 45697879 -26456003 - MLT1I LTR MaLR -4 405 86 1485 152 21 82 chr20 45699870 45700157 -26453725 - MLT1B LTR MaLR 0 390 124 2333 105 0 0 chr20 45700157 45700451 -26453431 - AluSg SINE Alu -16 294 1 1485 152 21 82 chr20 45700451 45700491 -26453391 - MLT1B LTR MaLR -266 124 83 4450 102 46 25 chr20 45700493 45701210 -26452672 + L1MA3 LINE L1 5574 6305 0 2231 120 0 3 chr20 45701230 45701531 -26452351 + AluSg SINE Alu 1 300 -10 422 174 0 54 chr20 45701537 45701629 -26452253 - MLT1B LTR MaLR -303 87 1 599 343 68 12 chr20 45701767 45702167 -26451715 + L3 LINE CR1 1136 1557 -20 1840 119 0 4 chr20 45703041 45703292 -26450590 - AluSg SINE Alu -14 296 47 624 252 50 28 chr20 45703368 45703586 -26450296 - MIR SINE MIR -32 230 8 546 300 43 63 chr20 45705438 45705738 -26448144 + MLT1J LTR MaLR 4 297 -214 338 218 20 7 chr20 45707389 45707536 -26446346 + (TA)n Simple_repeat Simple_repeat 1 149 0 247 158 0 0 chr20 45707536 45707574 -26446308 + (CA)n Simple_repeat Simple_repeat 1 38 0 1815 201 108 25 chr20 45707590 45707989 -26445893 - MLT2B3 LTR ERVL -46 508 77 2387 100 0 0 chr20 45708007 45708308 -26445574 - AluSc SINE Alu -8 301 1 494 125 0 34 chr20 45708384 45708472 -26445410 - MLT2B3 LTR ERVL -469 85 1 609 309 85 25 chr20 45708474 45709307 -26444575 - L1MC4a LINE L1 -804 5342 4967 293 276 0 0 chr20 45709522 45709598 -26444284 + MIR SINE MIR 79 154 -108 998 218 70 33 chr20 45710372 45710702 -26443180 - MER96B DNA MER1_type? -75 342 1 230 284 0 0 chr20 45710743 45710810 -26443072 + GA-rich Low_complexity Low_complexity 1 67 0 1842 130 88 0 chr20 45710810 45711094 -26442788 + AluSx SINE Alu 1 309 -3 245 219 65 81 chr20 45711856 45711979 -26441903 - MIR SINE MIR -114 148 28 271 280 136 32 chr20 45712321 45712446 -26441436 - MIR SINE MIR -98 164 27 510 251 107 45 chr20 45713616 45713859 -26440023 - MIR SINE MIR -3 259 2 294 226 32 21 chr20 45713859 45713939 -26439943 + L2 LINE L2 3192 3272 0 589 169 154 49 chr20 45714415 45714632 -26439250 + MER106B DNA MER1_type 1 1059 0 426 196 124 64 chr20 45714639 45714931 -26438951 - LTR16A1 LTR ERVL -23 434 99 2124 153 29 5 chr20 45715042 45715428 -26438454 - L1MB3 LINE L1 -2 6181 5787 1640 189 71 76 chr20 45715428 45715935 -26437947 - MLT2B3 LTR ERVL 0 554 1 493 181 0 11 chr20 45715935 45716029 -26437853 - L1MB3 LINE L1 -392 5791 5699 186 272 65 22 chr20 45716416 45716508 -26437374 + L2 LINE L2 3177 3272 0 283 237 158 0 chr20 45717101 45717177 -26436705 - MLT1C LTR MaLR -374 93 6 1569 183 31 86 chr20 45718855 45718934 -26434948 - MLT1A1 LTR MaLR 0 365 283 1839 173 0 10 chr20 45718934 45719241 -26434641 - AluSx SINE Alu -8 304 1 1569 183 31 86 chr20 45719241 45719543 -26434339 - MLT1A1 LTR MaLR -82 283 5 580 180 109 33 chr20 45719632 45719815 -26434067 - MIR SINE MIR 0 262 66 325 281 82 7 chr20 45721680 45721826 -26432056 - L1ME LINE L1 -320 5801 5645 329 316 105 68 chr20 45721904 45722517 -26431365 - L2 LINE L2 -2 3311 2677 275 131 273 30 chr20 45722926 45723025 -26430857 - L1M2 LINE L1 -525 5766 5644 322 285 136 63 chr20 45723324 45723640 -26430242 - L1ME LINE L1 -768 5378 5040 239 271 57 29 chr20 45723659 45723799 -26430083 - L1ME LINE L1 -2314 3832 3689 370 167 294 0 chr20 45723848 45723950 -26429932 - MER5A DNA MER1_type -3 186 55 187 225 0 0 chr20 45724068 45724108 -26429774 - MER5A DNA MER1_type -139 50 11 1629 160 3 49 chr20 45724145 45724451 -26429431 + AluJo SINE Alu 1 292 -20 797 273 109 40 chr20 45724537 45725134 -26428748 - L1ME LINE L1 -2751 3395 2758 1864 130 53 56 chr20 45725336 45725712 -26428170 - THE1C LTR MaLR 0 375 1 321 47 0 0 chr20 45725748 45725791 -26428091 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 26 50 0 0 chr20 45726233 45726273 -26427609 + AT_rich Low_complexity Low_complexity 1 40 0 262 218 0 51 chr20 45726479 45726557 -26427325 + CT-rich Low_complexity Low_complexity 1 74 0 328 345 135 37 chr20 45726559 45727017 -26426865 - HAL1b LINE L1 -809 539 37 543 118 0 0 chr20 45727546 45727631 -26426251 + (TCCC)n Simple_repeat Simple_repeat 4 88 0 1449 189 0 47 chr20 45727826 45727993 -26425889 - AluJo SINE Alu -16 296 148 276 53 0 0 chr20 45727993 45728031 -26425851 + (CAA)n Simple_repeat Simple_repeat 2 39 0 1449 189 0 47 chr20 45728031 45728160 -26425722 - AluJo SINE Alu -164 148 14 414 257 34 40 chr20 45728245 45728523 -26425359 - L1ME4a LINE L1 -11 6110 5798 243 299 63 30 chr20 45728757 45728896 -26424986 + MIR SINE MIR 23 163 -61 287 218 13 51 chr20 45729793 45729871 -26424011 + MIR SINE MIR 34 108 -154 482 267 51 67 chr20 45729877 45729972 -26423910 - MIR SINE MIR 0 262 167 1904 219 116 26 chr20 45729972 45730516 -26423366 - MLT1G1 LTR MaLR 0 595 3 482 267 51 67 chr20 45730516 45730675 -26423207 - MIR SINE MIR -95 167 12 590 276 69 24 chr20 45730681 45730927 -26422955 - MIR SINE MIR -4 258 2 219 231 0 0 chr20 45731198 45731237 -26422645 + polypyrimidine Low_complexity Low_complexity 3 41 0 1142 118 27 86 chr20 45731597 45731817 -26422065 + AluJo SINE Alu 84 290 -22 699 228 0 25 chr20 45732359 45732521 -26421361 + MLT1F1 LTR MaLR 409 566 -1 275 219 16 16 chr20 45732996 45733060 -26420822 - MLT1I LTR MaLR 0 409 346 449 255 125 38 chr20 45733205 45733542 -26420340 - MLT1J2 LTR MaLR -44 406 15 642 219 0 0 chr20 45734068 45734214 -26419668 + (TA)n Simple_repeat Simple_repeat 1 146 0 2225 87 0 0 chr20 45734215 45734490 -26419392 - AluY SINE Alu -16 295 21 660 256 117 94 chr20 45734490 45734799 -26419083 + MLT1G LTR MaLR 7 322 -273 447 220 118 35 chr20 45734825 45734999 -26418883 + MLT1F1 LTR MaLR 368 567 0 21 71 0 0 chr20 45735547 45735589 -26418293 + AT_rich Low_complexity Low_complexity 1 42 0 1692 136 14 14 chr20 45735899 45736179 -26417703 - L1MB4 LINE L1 0 6180 5901 510 230 0 0 chr20 45736217 45736317 -26417565 + MER58 DNA MER1_type 182 281 -2139 225 213 21 0 chr20 45737335 45737382 -26416500 - MER58 DNA MER1_type 0 2420 2373 180 359 0 0 chr20 45739329 45739393 -26414489 - MIR3 SINE MIR -29 179 116 193 279 176 0 chr20 45739427 45739495 -26414387 - L2 LINE L2 -16 3256 3177 701 226 239 29 chr20 45739499 45739805 -26414077 + MLT1F LTR MaLR 5 374 -168 979 221 5 0 chr20 45740196 45740404 -26413478 + MER3 DNA MER1_type 1 209 0 355 299 30 8 chr20 45740850 45740984 -26412898 + MIR SINE MIR 97 233 -29 326 281 83 103 chr20 45741694 45742088 -26411794 + L2 LINE L2 2834 3234 -79 186 71 0 0 chr20 45742088 45742116 -26411766 + (TTCTG)n Simple_repeat Simple_repeat 4 31 0 326 281 83 103 chr20 45742116 45742133 -26411749 + L2 LINE L2 3234 3250 -63 180 0 0 0 chr20 45742133 45742153 -26411729 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 2261 84 4 0 chr20 45742156 45742431 -26411451 - AluSg SINE Alu -33 277 2 326 281 83 103 chr20 45742431 45742469 -26411413 + L2 LINE L2 3252 3279 -34 375 244 207 21 chr20 45742854 45743047 -26410835 + MIR SINE MIR 20 248 -14 184 133 22 67 chr20 45743015 45743060 -26410822 + L2 LINE L2 3265 3307 -6 * 474 274 108 50 chr20 45744967 45745423 -26408459 + L2 LINE L2 2810 3291 -22 367 297 27 14 chr20 45745840 45745988 -26407894 - MLT1H LTR MaLR -7 542 393 368 278 93 51 chr20 45746020 45746236 -26407646 - MLT1H LTR MaLR -217 332 108 1462 193 83 42 chr20 45746456 45746969 -26406913 - MER67C LTR ERV1 -8 506 1 278 335 141 6 chr20 45747209 45747379 -26406503 - MIR3 SINE MIR -1 207 15 180 176 0 0 chr20 45747417 45747451 -26406431 + T-rich Low_complexity Low_complexity 2 35 0 4131 98 2 0 chr20 45748580 45749133 -26404749 - MER41A LTR ERV1 0 554 1 333 253 24 0 chr20 45749166 45749249 -26404633 + L1ME4a LINE L1 5540 5624 -497 1552 163 18 47 chr20 45749250 45749634 -26404248 + MER44D DNA MER2_type 3 671 -34 573 219 0 0 chr20 45749632 45749737 -26404145 + MER44D DNA MER2_type 504 608 -1 * 405 220 64 35 chr20 45750028 45750201 -26403681 + L1ME4a LINE L1 5939 6116 -5 261 353 90 12 chr20 45750239 45750406 -26403476 + MIR SINE MIR 8 187 -75 2209 127 0 3 chr20 45750942 45751250 -26402632 + AluSx SINE Alu 3 309 -3 262 174 43 43 chr20 45751548 45751617 -26402265 + MIR SINE MIR 84 152 -110 459 63 32 116 chr20 45751756 45751851 -26402031 - L1PA10 LINE L1 0 6168 6082 566 261 151 31 chr20 45752158 45752449 -26401433 - L1ME4a LINE L1 -13 6108 5783 183 217 0 0 chr20 45753121 45753181 -26400701 + (TG)n Simple_repeat Simple_repeat 1 60 0 250 290 89 32 chr20 45753981 45754105 -26399777 - L2 LINE L2 -5 3267 3137 201 39 0 0 chr20 45754173 45754199 -26399683 + (CA)n Simple_repeat Simple_repeat 1 26 0 663 270 127 93 chr20 45754351 45754637 -26399245 + L2 LINE L2 2365 2640 -674 960 218 30 0 chr20 45754637 45754839 -26399043 - MER3 DNA MER1_type -1 208 1 663 270 127 93 chr20 45754839 45754948 -26398934 + L2 LINE L2 2640 2744 -570 2151 122 0 25 chr20 45754948 45755267 -26398615 - AluSx SINE Alu -1 311 1 663 270 127 93 chr20 45755267 45755463 -26398419 + L2 LINE L2 2744 2977 -337 535 233 8 31 chr20 45755696 45755825 -26398057 + L2 LINE L2 3188 3313 0 255 259 19 0 chr20 45755838 45755892 -26397990 - MER91 DNA MER1_type 0 196 142 554 345 23 19 chr20 45755980 45756244 -26397638 - L2 LINE L2 -349 2965 2701 280 213 84 45 chr20 45756805 45756960 -26396922 - MER104 DNA Tc2 0 180 20 814 240 40 0 chr20 45757018 45757218 -26396664 - MIR SINE MIR -44 218 11 505 312 56 16 chr20 45757565 45757709 -26396173 + MIR SINE MIR 3 163 -99 1122 245 20 35 chr20 45757709 45758052 -26395830 - MER46C DNA MER2_type 0 338 1 505 312 56 16 chr20 45758052 45758157 -26395725 + MIR SINE MIR 163 262 0 291 290 117 14 chr20 45758865 45759010 -26394872 + MIR SINE MIR 60 219 -43 1294 199 118 72 chr20 45759986 45760469 -26393413 - MLT1D LTR MaLR 0 505 1 381 253 126 25 chr20 45761246 45761493 -26392389 + L1ME LINE L1 5327 5605 -516 456 283 41 93 chr20 45761672 45762038 -26391844 - L1M4 LINE L1 -1374 4772 4446 1598 217 73 10 chr20 45762038 45762448 -26391434 - MER63B DNA MER1_type 0 436 1 456 283 41 93 chr20 45762448 45762664 -26391218 - L1M4 LINE L1 -1700 4446 4220 335 337 67 39 chr20 45763030 45763493 -26390389 - L1M4 LINE L1 -3543 2603 2128 552 204 140 32 chr20 45763596 45763753 -26390129 + MER58C DNA MER1_type 39 212 -3 23 0 0 0 chr20 45764006 45764029 -26389853 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr20 45764208 45764229 -26389653 + AT_rich Low_complexity Low_complexity 1 21 0 1950 99 31 71 chr20 45764229 45764421 -26389461 - AluSx SINE Alu -1 311 136 2458 74 3 7 chr20 45764421 45764730 -26389152 - AluY SINE Alu -3 308 1 1950 99 31 71 chr20 45764730 45764861 -26389021 - AluSx SINE Alu -176 136 1 2427 161 99 13 chr20 45765500 45765965 -26387917 - MLT1D LTR MaLR 0 505 1 202 200 0 0 chr20 45766944 45766979 -26386903 + (TG)n Simple_repeat Simple_repeat 2 36 0 1848 193 11 30 chr20 45767097 45767465 -26386417 + MLT1A1 LTR MaLR 1 361 -4 486 285 0 0 chr20 45768075 45768212 -26385670 + MIR SINE MIR 94 230 -32 21 0 0 0 chr20 45768327 45768348 -26385534 + AT_rich Low_complexity Low_complexity 1 21 0 593 241 200 0 chr20 45768363 45768558 -26385324 - MIR SINE MIR -22 240 7 470 228 89 16 chr20 45768858 45768981 -26384901 - MER94 DNA DNA -2 132 1 522 183 0 48 chr20 45769186 45769372 -26384510 + C-rich Low_complexity Low_complexity 3 179 0 274 263 15 0 chr20 45769351 45769484 -26384398 + CT-rich Low_complexity Low_complexity 1 135 0 * 289 287 37 52 chr20 45770537 45770673 -26383209 - MER5A DNA MER1_type -2 187 54 2400 121 15 91 chr20 45770993 45771456 -26382426 - MSTA LTR MaLR 0 428 1 450 13 0 77 chr20 45771766 45771844 -26382038 + (TCCC)n Simple_repeat Simple_repeat 3 74 0 224 312 28 28 chr20 45771947 45772056 -26381826 + MIR SINE MIR 97 205 -57 400 223 18 18 chr20 45772394 45772506 -26381376 + MIR SINE MIR 150 261 -1 261 253 13 13 chr20 45772527 45772602 -26381280 + MER103 DNA DNA 88 162 -4 259 271 6 17 chr20 45772621 45772797 -26381085 + CT-rich Low_complexity Low_complexity 1 174 0 918 223 63 0 chr20 45773669 45773875 -26380007 + MER20 DNA MER1_type 1 219 0 381 176 44 22 chr20 45774238 45774329 -26379553 + MIR SINE MIR 37 129 -133 723 262 49 13 chr20 45774987 45775212 -26378670 - MIR SINE MIR -10 252 20 455 238 205 7 chr20 45775703 45775854 -26378028 - MIR SINE MIR -35 227 47 355 308 9 0 chr20 45775920 45776027 -26377855 + L2 LINE L2 2565 2672 -642 327 292 50 17 chr20 45776042 45776162 -26377720 + L2 LINE L2 3190 3313 0 518 227 22 0 chr20 45776219 45776457 -26377425 + (TCCA)n Simple_repeat Simple_repeat 1 243 0 188 167 21 0 chr20 45776507 45776555 -26377327 + (TCCA)n Simple_repeat Simple_repeat 3 51 0 188 301 32 65 chr20 45777678 45777771 -26376111 - L2 LINE L2 -1 3271 3182 961 248 87 112 chr20 45777897 45778449 -26375433 - MLT1G LTR MaLR 0 590 53 241 301 24 0 chr20 45778744 45778827 -26375055 - L2 LINE L2 -1004 2310 2226 856 303 66 49 chr20 45778843 45779269 -26374613 - MLT1K LTR MaLR -19 569 137 290 278 98 35 chr20 45779370 45779625 -26374257 - L2 LINE L2 -1095 2219 1949 267 31 0 0 chr20 45779629 45779661 -26374221 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 596 168 8 25 chr20 45779661 45779780 -26374102 - L2 LINE L2 -13 3300 3184 344 272 49 53 chr20 45779771 45780014 -26373868 - L2 LINE L2 -1367 1947 1706 * 1025 152 41 35 chr20 45780665 45780862 -26373020 + MER20 DNA MER1_type 22 219 0 1826 157 17 34 chr20 45781578 45781928 -26371954 + L1MB5 LINE L1 5821 6164 -10 410 184 13 0 chr20 45782326 45782402 -26371480 + MIR SINE MIR 67 143 -119 225 65 0 0 chr20 45782428 45782459 -26371423 + (CATA)n Simple_repeat Simple_repeat 2 32 0 313 132 58 33 chr20 45782478 45782599 -26371283 + (TA)n Simple_repeat Simple_repeat 1 124 0 614 322 103 25 chr20 45782687 45783333 -26370549 - L2 LINE L2 0 3313 2616 240 111 0 0 chr20 45783583 45783619 -26370263 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 1859 151 3 17 chr20 45783622 45783914 -26369968 - AluJo SINE Alu -24 288 1 529 330 40 9 chr20 45784765 45784992 -26368890 - MIR SINE MIR 0 262 29 258 335 139 26 chr20 45785023 45785253 -26368629 - L2 LINE L2 -39 3274 3019 329 280 84 35 chr20 45786261 45786404 -26367478 - MIR SINE MIR -6 256 107 2244 100 0 7 chr20 45786532 45786847 -26367035 - AluSg SINE Alu 0 313 1 352 323 16 37 chr20 45787470 45787659 -26366223 + MIR SINE MIR 78 262 0 350 252 43 111 chr20 45787822 45788056 -26365826 + L2 LINE L2 3095 3312 -1 198 308 88 0 chr20 45788091 45788182 -26365700 - L2 LINE L2 -12 3260 3162 842 184 148 131 chr20 45789272 45789691 -26364191 + LTR37A LTR ERV1 1 426 0 213 233 35 81 chr20 45789705 45789791 -26364091 + MIR SINE MIR 85 166 -96 513 299 45 23 chr20 45789987 45790208 -26363674 + L3 LINE CR1 1244 1469 -108 198 274 0 0 chr20 45790408 45790459 -26363423 + MIR SINE MIR 206 256 -6 1168 282 133 35 chr20 45790715 45791617 -26362265 + L2 LINE L2 2310 3271 -42 1926 135 8 0 chr20 45791618 45791885 -26361997 + AluSp SINE Alu 20 288 -25 303 93 0 0 chr20 45791905 45791948 -26361934 + (GACTG)n Simple_repeat Simple_repeat 3 45 0 196 222 0 56 chr20 45791952 45792006 -26361876 + L2 LINE L2 3222 3272 0 1891 249 30 66 chr20 45792101 45792207 -26361675 + MLT1E LTR MaLR 22 130 -463 1837 164 48 0 chr20 45792207 45792499 -26361383 + AluJo SINE Alu 1 306 -6 1891 249 30 66 chr20 45792499 45792554 -26361328 + MLT1E LTR MaLR 130 185 -408 2114 118 7 33 chr20 45792554 45792860 -26361022 - AluSx SINE Alu -14 298 1 1891 249 30 66 chr20 45792860 45793288 -26360594 + MLT1E LTR MaLR 185 591 -2 195 316 0 0 chr20 45794126 45794183 -26359699 - L2 LINE L2 -15 3298 3242 196 292 0 52 chr20 45794395 45794491 -26359391 - L2 LINE L2 -333 2980 2890 343 215 204 0 chr20 45794955 45795048 -26358834 + MER81 DNA DNA 1 112 -2 195 214 0 0 chr20 45795883 45795925 -26357957 - L2 LINE L2 -2 3311 3270 1111 205 128 48 chr20 45796172 45796508 -26357374 - MLT1B LTR MaLR -17 373 11 1837 170 10 0 chr20 45796869 45797158 -26356724 + AluJo SINE Alu 3 294 -18 27 29 0 0 chr20 45798042 45798076 -26355806 + AT_rich Low_complexity Low_complexity 1 34 0 429 275 176 47 chr20 45798089 45798493 -26355389 - L1ME4a LINE L1 -21 6100 5645 414 276 9 9 chr20 45799634 45799750 -26354132 + MIR SINE MIR 1 116 -146 215 93 47 47 chr20 45800013 45800056 -26353826 + CT-rich Low_complexity Low_complexity 2 44 0 2019 151 6 0 chr20 45800056 45800367 -26353515 - AluSq SINE Alu 0 313 1 390 267 61 12 chr20 45800836 45801007 -26352875 - MIR SINE MIR -48 214 37 822 166 51 11 chr20 45801842 45802017 -26351865 + MER5A DNA MER1_type 8 189 0 963 278 91 7 chr20 45802033 45802451 -26351431 - MER113 DNA MER1_type? -8 513 61 526 279 27 6 chr20 45802640 45802823 -26351059 + MER5A DNA MER1_type 1 187 -2 230 301 175 14 chr20 45802834 45802977 -26350905 + MIR SINE MIR 19 184 -78 2017 146 0 40 chr20 45803492 45803814 -26350068 + AluSx SINE Alu 1 309 -3 331 352 21 0 chr20 45803953 45804098 -26349784 + MIR SINE MIR 59 206 -56 401 238 49 8 chr20 45804954 45805076 -26348806 - LTR33 LTR ERVL -5 516 390 1358 286 61 13 chr20 45805082 45805413 -26348469 - L2 LINE L2 -913 2401 2033 2206 116 0 0 chr20 45805413 45805697 -26348185 + AluSg SINE Alu 1 284 -26 1358 286 61 13 chr20 45805697 45805904 -26347978 - L2 LINE L2 -1281 2033 1837 1161 175 24 5 chr20 45806040 45806246 -26347636 - AluJo SINE Alu -8 304 95 343 213 67 0 chr20 45806288 45806363 -26347519 - AluJb SINE Alu -176 126 47 289 154 0 0 chr20 45806564 45806616 -26347266 - L1ME4a LINE L1 -224 5897 5846 1068 226 80 62 chr20 45807079 45807481 -26346401 - L1ME1 LINE L1 -7 6159 5751 270 208 39 13 chr20 45807994 45808071 -26345811 + MIR SINE MIR 174 252 -10 241 135 0 0 chr20 45809148 45809185 -26344697 - MER92A LTR ERV1 -323 89 53 1200 149 154 0 chr20 45809194 45809408 -26344474 - MER92B LTR ERV1 -389 247 1 7524 40 5 0 chr20 45810049 45811705 -26342177 + L1PA4 LINE L1 4518 6177 0 1423 134 112 34 chr20 45811746 45812015 -26341867 + AluJo SINE Alu 1 290 -22 195 42 0 0 chr20 45812024 45812048 -26341834 + (TAGA)n Simple_repeat Simple_repeat 3 26 0 361 240 90 0 chr20 45812796 45812896 -26340986 - L1MC5 LINE L1 -76 7885 7777 1101 208 23 23 chr20 45812908 45813172 -26340710 - L1ME1 LINE L1 -121 6045 5782 344 333 40 5 chr20 45813583 45813784 -26340098 + L1ME4a LINE L1 3738 3945 -2201 2226 188 37 26 chr20 45814011 45814473 -26339409 + MLT1C LTR MaLR 1 467 0 656 316 34 4 chr20 45814477 45814711 -26339171 - MIR SINE MIR -10 252 12 398 262 19 0 chr20 45814730 45814833 -26339049 + L1ME4a LINE L1 4746 4850 -1296 829 274 120 50 chr20 45815204 45815997 -26337885 + L1ME4a LINE L1 5267 6114 -7 22 0 0 0 chr20 45816047 45816069 -26337813 + AT_rich Low_complexity Low_complexity 1 22 0 222 279 19 39 chr20 45816287 45816391 -26337491 - MIR SINE MIR 0 262 161 2320 118 19 19 chr20 45816499 45816871 -26337011 + THE1C LTR MaLR 4 375 0 838 234 60 67 chr20 45818089 45818388 -26335494 + MER69 DNA AcHobo 13 309 -2217 222 37 0 0 chr20 45818452 45818479 -26335403 + (TATG)n Simple_repeat Simple_repeat 2 28 0 1836 147 7 0 chr20 45818487 45818759 -26335123 - AluJo SINE Alu -25 287 14 303 270 0 27 chr20 45818774 45818848 -26335034 + MER69 DNA AcHobo 328 399 -827 * 1634 222 118 15 chr20 45818842 45819368 -26334514 + MER69 DNA AcHobo 1947 2526 0 356 192 64 0 chr20 45819368 45819446 -26334436 - MIR SINE MIR -99 163 81 3932 106 46 141 chr20 45820880 45821574 -26332308 - LTR1 LTR ERV1 0 785 188 7191 53 2 0 chr20 45821574 45822905 -26330977 - L1PA6 LINE L1 0 6154 4816 3932 106 46 141 chr20 45822905 45823077 -26330805 - LTR1 LTR ERV1 -597 188 1 220 324 0 0 chr20 45823192 45823266 -26330616 - MIR SINE MIR -102 106 33 266 320 49 0 chr20 45824384 45824506 -26329376 + MIR SINE MIR 120 247 -15 356 305 45 45 chr20 45824606 45824760 -26329122 + L2 LINE L2 3159 3312 -1 405 260 87 35 chr20 45824877 45825050 -26328832 + MIR SINE MIR 53 234 -28 1128 244 0 9 chr20 45825618 45825835 -26328047 - MER58A DNA MER1_type -9 215 1 526 152 83 83 chr20 45826267 45826365 -26327517 - MIR SINE MIR 0 262 162 4725 43 30 28 chr20 45826365 45826970 -26326912 - LTR14B LTR ERVK -2 606 1 526 152 83 83 chr20 45826970 45827016 -26326866 - MIR SINE MIR -99 163 118 521 241 62 12 chr20 45827552 45827714 -26326168 + MIR SINE MIR 65 234 -28 275 284 42 11 chr20 45827734 45827829 -26326053 - MIR SINE MIR -105 157 60 297 274 145 46 chr20 45827966 45828269 -26325613 - L2 LINE L2 -74 3239 2907 1639 157 8 4 chr20 45829159 45829420 -26324462 + AluJo SINE Alu 21 282 -30 244 249 48 47 chr20 45829453 45829566 -26324316 - MIR SINE MIR -53 155 44 771 246 83 31 chr20 45829752 45829980 -26323902 - MIR SINE MIR -22 240 1 582 202 73 79 chr20 45830890 45830985 -26322897 + MER45A DNA AcHobo 1 96 -1485 2302 105 7 0 chr20 45830985 45831291 -26322591 - AluSp SINE Alu -4 309 2 582 202 73 79 chr20 45831291 45831373 -26322509 + MER45A DNA AcHobo 96 177 -1 219 208 40 89 chr20 45831478 45831579 -26322303 + MIR SINE MIR 116 211 -51 1123 236 71 11 chr20 45831790 45832057 -26321825 + MER58 DNA MER1_type 2 284 -57 641 211 62 19 chr20 45832059 45832220 -26321662 + MLT1E1 LTR MaLR 1 168 -486 1128 220 108 10 chr20 45832226 45832521 -26321361 + MLT1B LTR MaLR 67 390 0 378 155 0 0 chr20 45832522 45832580 -26321302 + MER58 DNA MER1_type 2361 2418 -2 739 258 36 27 chr20 45833023 45833244 -26320638 + MIR SINE MIR 7 229 -33 27 0 0 0 chr20 45833596 45833623 -26320259 + AT_rich Low_complexity Low_complexity 1 27 0 7715 31 18 0 chr20 45833623 45834597 -26319285 - L1PA3 LINE L1 -1 6154 5177 984 228 87 0 chr20 45835575 45835781 -26318101 + MER58A DNA MER1_type 1 224 0 197 184 0 0 chr20 45835864 45835902 -26317980 + L2 LINE L2 3261 3298 -15 2111 127 53 28 chr20 45836513 45836868 -26317014 - THE1B LTR MaLR 0 364 1 201 273 31 62 chr20 45837157 45837285 -26316597 - MIR3 SINE MIR -17 191 68 191 423 0 0 chr20 45838780 45838851 -26315031 + L2 LINE L2 3119 3189 -83 465 278 45 58 chr20 45839044 45839267 -26314615 + MIR SINE MIR 22 241 -21 341 196 18 131 chr20 45839328 45839496 -26314386 - MLT1J2 LTR MaLR 0 450 302 1574 227 36 14 chr20 45839504 45839861 -26314021 - MLT1A1 LTR MaLR 0 365 1 1945 175 11 35 chr20 45840139 45840511 -26313371 - MLT1A1 LTR MaLR -2 363 1 287 331 32 0 chr20 45841169 45841293 -26312589 - MIR SINE MIR -55 207 80 189 0 0 0 chr20 45841575 45841596 -26312286 + (TA)n Simple_repeat Simple_repeat 2 22 0 286 241 54 27 chr20 45841904 45842016 -26311866 + L3 LINE CR1 1372 1486 -91 199 146 45 22 chr20 45842243 45842332 -26311550 + (TTATA)n Simple_repeat Simple_repeat 5 95 0 191 62 94 16 chr20 45842369 45842433 -26311449 + (TA)n Simple_repeat Simple_repeat 2 70 0 221 21 42 42 chr20 45842466 45842514 -26311368 + (TTA)n Simple_repeat Simple_repeat 3 50 0 307 323 148 8 chr20 45842905 45843162 -26310720 + L2 LINE L2 2029 2321 -993 572 214 6 0 chr20 45843648 45843826 -26310056 + (TG)n Simple_repeat Simple_repeat 1 179 0 251 211 18 0 chr20 45843845 45843902 -26309980 + (TG)n Simple_repeat Simple_repeat 1 58 0 194 298 18 0 chr20 45843943 45844000 -26309882 - MIR SINE MIR -105 157 100 275 357 138 5 chr20 45844429 45844653 -26309229 + L2 LINE L2 2708 2961 -353 2241 124 0 0 chr20 45844727 45845033 -26308849 - AluSx SINE Alu -5 307 2 391 96 0 0 chr20 45845584 45845636 -26308246 - MADE1 DNA Mariner -28 52 1 380 129 0 14 chr20 45846673 45846743 -26307139 + (CA)n Simple_repeat Simple_repeat 2 70 0 1479 251 63 18 chr20 45846881 45847327 -26306555 + MLT1C LTR MaLR 1 466 -1 2438 81 0 3 chr20 45847423 45847730 -26306152 - AluY SINE Alu -5 306 1 250 312 64 24 chr20 45847830 45847955 -26305927 - MIR SINE MIR -87 175 46 607 270 59 9 chr20 45848139 45848361 -26305521 - L1ME4a LINE L1 -227 5894 5662 281 295 199 33 chr20 45849463 45849734 -26304148 + L2 LINE L2 2932 3247 -25 22 35 0 0 chr20 45850284 45850313 -26303569 + AT_rich Low_complexity Low_complexity 1 29 0 272 224 17 0 chr20 45850396 45850454 -26303428 + GA-rich Low_complexity Low_complexity 3 61 0 766 263 58 5 chr20 45850496 45850720 -26303162 - MIR SINE MIR -21 241 6 225 255 0 0 chr20 45850826 45850873 -26303009 - L1MC/D LINE L1 -2000 5808 5762 621 187 0 0 chr20 45851493 45851600 -26302282 + AluSp/q SINE Alu 206 312 -1 787 242 45 14 chr20 45851666 45851889 -26301993 - MIR SINE MIR -27 235 6 1540 156 83 7 chr20 45852682 45852984 -26300898 + MER33 DNA MER1_type 1 323 -1 585 255 83 10 chr20 45853053 45853257 -26300625 - MIR SINE MIR 0 262 44 418 229 166 19 chr20 45853663 45853820 -26300062 + MIR3 SINE MIR 28 207 -1 404 192 0 13 chr20 45854588 45854666 -26299216 - LTR33A LTR ERVL -3 520 444 1850 195 75 47 chr20 45854691 45855225 -26298657 + L1MB2 LINE L1 4837 5412 -759 2363 111 0 3 chr20 45855225 45855532 -26298350 + AluSx SINE Alu 1 306 -6 1850 195 75 47 chr20 45855532 45855774 -26298108 + L1MB2 LINE L1 5412 5646 -525 711 213 0 0 chr20 45855775 45855902 -26297980 - Tigger3(Golem) DNA MER2_type -2 3027 2901 355 213 0 0 chr20 45855898 45855959 -26297923 - Tigger3(Golem) DNA MER2_type -2966 63 3 * 2204 160 8 5 chr20 45855961 45856330 -26297552 + L1MB2 LINE L1 5645 6014 -157 1410 247 16 30 chr20 45856336 45856705 -26297177 - MLT1A1 LTR MaLR 0 365 2 7446 209 44 44 chr20 45856706 45858441 -26295441 - MLT1A1-int LTR MaLR 0 1735 1 573 185 6 108 chr20 45858442 45858495 -26295387 - MLT1A1 LTR MaLR -1 364 307 2183 121 7 0 chr20 45858495 45858793 -26295089 + AluSx SINE Alu 1 300 -12 573 185 6 108 chr20 45858793 45858896 -26294986 - MLT1A1 LTR MaLR -58 307 224 243 0 0 0 chr20 45859059 45859086 -26294796 + (A)n Simple_repeat Simple_repeat 1 27 0 353 321 47 31 chr20 45859120 45859313 -26294569 + MIR SINE MIR 23 218 -44 500 255 38 38 chr20 45859513 45859670 -26294212 - MIR SINE MIR -39 223 67 267 252 244 0 chr20 45860330 45860461 -26293421 + MER5A DNA MER1_type 27 189 0 295 273 107 16 chr20 45860924 45861045 -26292837 + L2 LINE L2 3182 3313 0 386 300 61 44 chr20 45861133 45861313 -26292569 + MIR3 SINE MIR 23 205 -3 186 221 0 128 chr20 45861824 45861910 -26291972 + MIR SINE MIR 76 150 -112 188 67 33 0 chr20 45862114 45862144 -26291738 + (TCTCC)n Simple_repeat Simple_repeat 2 32 0 202 320 52 21 chr20 45863345 45863442 -26290440 + MIR SINE MIR 48 147 -115 274 204 0 0 chr20 45864125 45864174 -26289708 - L2 LINE L2 -14 3258 3210 613 209 130 3 chr20 45864280 45864420 -26289462 + MER33 DNA MER1_type 45 166 -2458 186 43 0 0 chr20 45864420 45864443 -26289439 + (TG)n Simple_repeat Simple_repeat 2 24 0 613 209 130 3 chr20 45864443 45864522 -26289360 + MER33 DNA MER1_type 166 363 0 413 293 177 66 chr20 45864536 45864765 -26289117 + L2 LINE L2 2825 3027 -286 261 0 0 0 chr20 45864765 45864794 -26289088 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 413 293 177 66 chr20 45864794 45865004 -26288878 + L2 LINE L2 3027 3313 0 477 227 114 28 chr20 45865108 45865284 -26288598 - LTR33 LTR ERVL -3 518 328 301 260 10 83 chr20 45865340 45865436 -26288446 - LTR33 LTR ERVL -351 170 82 255 302 94 18 chr20 45865664 45865995 -26287887 + L1ME LINE L1 4204 4559 -1587 192 40 0 0 chr20 45866242 45866267 -26287615 + (TG)n Simple_repeat Simple_repeat 1 25 0 22 35 0 0 chr20 45866446 45866475 -26287407 + AT_rich Low_complexity Low_complexity 1 29 0 2415 71 0 34 chr20 45866585 45866907 -26286975 + AluY SINE Alu 1 311 0 248 279 35 12 chr20 45867018 45867104 -26286778 + L1ME LINE L1 5491 5578 -543 245 367 9 0 chr20 45867160 45867269 -26286613 + MIR SINE MIR 77 186 -76 1926 159 187 10 chr20 45867555 45867717 -26286165 + MER31B LTR ERV1 1 133 -333 1574 198 70 9 chr20 45867717 45868061 -26285821 - MLT1A1 LTR MaLR 0 365 1 1926 159 187 10 chr20 45868061 45868294 -26285588 + MER31B LTR ERV1 133 466 0 495 218 105 8 chr20 45868400 45868524 -26285358 - L2 LINE L2 0 3272 3137 697 233 37 19 chr20 45869293 45869502 -26284380 + L1M4 LINE L1 5460 5677 -497 2165 126 10 0 chr20 45870745 45871047 -26282835 + AluSx SINE Alu 1 305 -7 284 282 118 9 chr20 45872149 45872259 -26281623 + L2 LINE L2 3192 3313 0 2496 153 32 104 chr20 45872690 45873245 -26280637 + MLT2B2 LTR ERVL 1 515 0 1159 217 14 0 chr20 45874634 45874846 -26279036 + MER58A DNA MER1_type 10 224 0 460 336 40 16 chr20 45876655 45876908 -26276974 - MIR SINE MIR -3 259 1 6143 124 30 4 chr20 45877277 45878634 -26275248 + L1PB1 LINE L1 4766 6146 -5 270 288 86 37 chr20 45878987 45879267 -26274615 + LTR33 LTR ERVL 23 346 -175 300 346 0 44 chr20 45879401 45879560 -26274322 - MIR SINE MIR -63 199 48 274 281 33 33 chr20 45881085 45881206 -26272676 - MIR3 SINE MIR -5 203 83 339 267 0 0 chr20 45882282 45882372 -26271510 + MIR SINE MIR 159 248 -14 201 374 17 9 chr20 45883325 45883440 -26270442 - MIR3 SINE MIR -9 199 84 1554 210 60 14 chr20 45883460 45883758 -26270124 + MLT1A1 LTR MaLR 3 321 -44 1964 160 7 0 chr20 45883758 45884065 -26269817 + AluSx SINE Alu 1 309 -3 1554 210 60 14 chr20 45884065 45884113 -26269769 + MLT1A1 LTR MaLR 321 365 0 775 266 87 25 chr20 45884753 45884818 -26269064 + MER46C DNA MER2_type 2 62 -276 441 0 0 0 chr20 45884818 45884867 -26269015 + (TG)n Simple_repeat Simple_repeat 2 50 0 775 266 87 25 chr20 45884867 45885076 -26268806 + MER46C DNA MER2_type 62 293 -45 326 255 11 11 chr20 45885119 45885213 -26268669 - MIR SINE MIR -109 153 60 1828 190 70 50 chr20 45885725 45885765 -26268117 + MLT1C LTR MaLR 1 39 -428 2271 117 0 13 chr20 45885765 45886081 -26267801 + AluSx SINE Alu 1 312 0 1828 190 70 50 chr20 45886081 45886498 -26267384 + MLT1C LTR MaLR 39 467 0 450 296 50 6 chr20 45886526 45886685 -26267197 + MER5B DNA MER1_type 11 176 -2 233 311 40 14 chr20 45887416 45887490 -26266392 - L2 LINE L2 -95 3177 3102 2072 116 31 0 chr20 45888160 45888453 -26265429 + AluSq SINE Alu 1 302 -11 248 283 0 0 chr20 45888773 45888833 -26265049 - L2 LINE L2 -40 3273 3214 189 379 19 0 chr20 45889290 45889393 -26264489 + MIR SINE MIR 45 149 -59 718 260 73 10 chr20 45889472 45889676 -26264206 + MIR SINE MIR 32 248 -14 246 299 128 8 chr20 45889730 45889847 -26264035 - MIR SINE MIR -110 152 22 338 229 59 34 chr20 45890705 45890823 -26263059 - L1ME4a LINE L1 -37 6084 5964 384 278 61 28 chr20 45890855 45891067 -26262815 - HAL1 LINE L1 -29 2478 2260 710 276 143 48 chr20 45891124 45891620 -26262262 - HAL1 LINE L1 -410 2097 1555 391 209 29 65 chr20 45891616 45891755 -26262127 - L1MC3 LINE L1 -1624 6161 6028 * 545 79 45 11 chr20 45891764 45891853 -26262029 - LTR10D LTR ERV1 -421 92 1 5844 235 52 43 chr20 45891862 45892880 -26261002 - L1MC3 LINE L1 -421 5745 4738 1231 195 78 35 chr20 45892880 45893037 -26260845 - AluJo SINE Alu -18 294 118 203 0 0 36 chr20 45893037 45893065 -26260817 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1231 195 78 35 chr20 45893065 45893189 -26260693 - AluJo SINE Alu -194 118 1 5844 235 52 43 chr20 45893189 45893373 -26260509 - L1MC3 LINE L1 -1428 4738 4557 1383 198 57 7 chr20 45893373 45893656 -26260226 - AluJb SINE Alu -15 297 1 5844 235 52 43 chr20 45893656 45893962 -26259920 - L1MC3 LINE L1 -1609 4557 4255 5937 108 23 4 chr20 45893962 45895781 -26258101 - L1PA14 LINE L1 0 6161 4294 5844 235 52 43 chr20 45895781 45896861 -26257021 - L1MC3 LINE L1 -1911 4255 3145 1202 123 6 6 chr20 45896861 45897032 -26256850 - AluSx SINE Alu -141 171 1 10169 128 36 0 chr20 45897032 45898510 -26255372 - THE1C-int LTR MaLR -48 1532 1 2714 120 3 8 chr20 45898510 45898885 -26254997 - THE1C LTR MaLR 0 375 3 4393 206 11 10 chr20 45898887 45899845 -26254037 - L1PA14 LINE L1 -3124 3022 2064 438 70 0 0 chr20 45899864 45899921 -26253961 - U2 snRNA snRNA -128 60 4 1175 300 56 63 chr20 45899924 45900866 -26253016 - HAL1 LINE L1 -1570 937 2 427 294 78 26 chr20 45900930 45901236 -26252646 - L1ME4a LINE L1 -157 5964 5643 280 304 75 71 chr20 45901649 45901840 -26252042 - L1ME4a LINE L1 -954 5192 5003 189 107 0 0 chr20 45901840 45901868 -26252014 + (TTAA)n Simple_repeat Simple_repeat 3 30 0 280 304 75 71 chr20 45901868 45902887 -26250995 - L1ME4a LINE L1 -1143 5003 3967 26145 140 13 18 chr20 45902971 45908122 -26245760 - L1PA8A LINE L1 -21 6425 1236 225 65 0 0 chr20 45908122 45908153 -26245729 + (TTG)n Simple_repeat Simple_repeat 3 33 0 26145 140 13 18 chr20 45908153 45908797 -26245085 - L1PA8A LINE L1 -5210 1236 590 335 274 65 13 chr20 45909200 45909353 -26244529 - HAL1 LINE L1 -106 2401 2241 1732 120 55 120 chr20 45909633 45910034 -26243848 - THE1C LTR MaLR 0 375 1 359 291 170 6 chr20 45910543 45910725 -26243157 - HAL1 LINE L1 -795 1712 1501 204 284 20 29 chr20 45912022 45912124 -26241758 - MIR SINE MIR -50 212 112 424 173 39 0 chr20 45913002 45913106 -26240776 + GA-rich Low_complexity Low_complexity 3 110 0 540 259 104 16 chr20 45913616 45913809 -26240073 - MIR SINE MIR 0 262 53 510 207 27 0 chr20 45913889 45914000 -26239882 - L1M4 LINE L1 -597 5581 5468 1312 189 23 0 chr20 45914000 45914259 -26239623 + L1MB4 LINE L1 5912 6176 -4 2521 256 59 58 chr20 45914263 45915342 -26238540 + HAL1b LINE L1 260 1340 -8 281 257 37 18 chr20 45915372 45915481 -26238401 + L1ME4a LINE L1 5963 6073 -48 22 0 0 0 chr20 45915487 45915509 -26238373 + AT_rich Low_complexity Low_complexity 1 22 0 198 0 0 0 chr20 45916152 45916174 -26237708 + (TTTTA)n Simple_repeat Simple_repeat 2 23 0 1853 132 0 28 chr20 45916180 45916468 -26237414 - AluSx SINE Alu -32 280 1 1204 240 157 14 chr20 45916548 45916989 -26236893 + MLT1D LTR MaLR 2 505 0 189 309 0 0 chr20 45917309 45917364 -26236518 + L2 LINE L2 2591 2645 -669 261 330 60 0 chr20 45918022 45918122 -26235760 + L2 LINE L2 2928 3033 -239 808 269 99 27 chr20 45918169 45918571 -26235311 - LTR16A LTR ERVL -8 442 12 204 125 0 0 chr20 45918699 45918731 -26235151 + (TGAA)n Simple_repeat Simple_repeat 2 33 0 765 234 25 90 chr20 45919642 45919691 -26234191 - MIR SINE MIR 0 262 211 917 211 50 41 chr20 45919691 45919909 -26233973 + MER58A DNA MER1_type 1 220 -4 765 234 25 90 chr20 45919909 45919976 -26233906 - MIR SINE MIR -51 211 141 2286 114 0 0 chr20 45919976 45920275 -26233607 - AluSc SINE Alu -10 299 1 765 234 25 90 chr20 45920275 45920435 -26233447 - MIR SINE MIR -121 141 3 21 0 0 0 chr20 45920455 45920476 -26233406 + AT_rich Low_complexity Low_complexity 1 21 0 421 198 25 0 chr20 45920940 45921021 -26232861 + L2 LINE L2 3226 3308 -5 2604 150 38 20 chr20 45921461 45921913 -26231969 + MLT1C LTR MaLR 1 460 -7 2284 118 0 6 chr20 45922625 45922939 -26230943 + AluSx SINE Alu 1 312 0 656 238 93 0 chr20 45923105 45923277 -26230605 - MER5A DNA MER1_type -1 188 1 859 237 19 42 chr20 45923493 45923708 -26230174 - MIR SINE MIR -34 228 19 204 286 48 16 chr20 45923760 45923823 -26230059 + MIR SINE MIR 84 148 -114 952 188 112 0 chr20 45924254 45924424 -26229458 + MER5A DNA MER1_type 1 189 0 473 270 17 67 chr20 45924427 45924605 -26229277 + MIR3 SINE MIR 18 186 -22 298 362 141 52 chr20 45924629 45924955 -26228927 + L2 LINE L2 2905 3259 -13 24 0 0 0 chr20 45925381 45925405 -26228477 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr20 45925908 45925930 -26227952 + AT_rich Low_complexity Low_complexity 1 22 0 795 221 25 6 chr20 45926232 45926395 -26227487 + MIR SINE MIR 43 208 -54 185 200 36 0 chr20 45927291 45927346 -26226536 + CT-rich Low_complexity Low_complexity 2 58 0 326 281 10 10 chr20 45927363 45927459 -26226423 + CT-rich Low_complexity Low_complexity 3 98 0 2253 157 79 53 chr20 45928415 45928907 -26224975 - MLT1D LTR MaLR 0 505 1 271 268 46 51 chr20 45929446 45929619 -26224263 - MIR SINE MIR -15 247 78 232 273 201 22 chr20 45929908 45930047 -26223835 + MIR3 SINE MIR 3 166 -42 845 241 45 0 chr20 45930106 45930305 -26223577 + MER3 DNA MER1_type 1 208 -1 475 249 172 12 chr20 45930357 45930526 -26223356 + MIR SINE MIR 66 261 -1 506 232 26 51 chr20 45930598 45930757 -26223125 - MIR SINE MIR -63 145 38 225 358 97 17 chr20 45931804 45931980 -26221902 - MLT1J2 LTR MaLR -64 386 197 465 266 158 6 chr20 45931980 45932138 -26221744 - MER5A DNA MER1_type 0 189 8 589 191 37 44 chr20 45932174 45932310 -26221572 - MLT1J2 LTR MaLR -268 182 48 1933 182 3 0 chr20 45932964 45933282 -26220600 + L1PB4 LINE L1 5824 6142 -14 189 121 0 0 chr20 45933566 45933599 -26220283 + (TC)n Simple_repeat Simple_repeat 1 33 0 353 318 66 0 chr20 45933967 45934118 -26219764 - L3 LINE CR1 -106 1471 1311 622 227 14 14 chr20 45934475 45934616 -26219266 - MLT1H LTR MaLR -380 169 29 350 288 64 8 chr20 45934759 45934884 -26218998 - MIR SINE MIR -50 212 81 324 268 12 0 chr20 45935589 45935671 -26218211 - MIR SINE MIR -95 167 85 236 288 35 82 chr20 45935692 45935862 -26218020 - L2 LINE L2 -209 3063 2902 208 321 167 0 chr20 45935982 45936066 -26217816 - MER5C DNA MER1_type 0 324 227 583 292 6 6 chr20 45936248 45936426 -26217456 - L1MB8 LINE L1 0 6178 6001 693 259 30 0 chr20 45936864 45937030 -26216852 - MIR SINE MIR -2 260 90 1591 190 26 6 chr20 45937096 45937443 -26216439 - Charlie5 DNA MER1_type 0 2616 2263 338 239 0 0 chr20 45937467 45937538 -26216344 - Charlie5 DNA MER1_type -2491 121 51 227 292 0 34 chr20 45938008 45938097 -26215785 + GA-rich Low_complexity Low_complexity 2 87 0 1127 225 22 41 chr20 45938466 45938782 -26215100 - MER46C DNA MER2_type -7 331 22 422 248 83 0 chr20 45939140 45939261 -26214621 - MER94 DNA DNA -3 131 1 1201 199 24 0 chr20 45939327 45939538 -26214344 - MER58A DNA MER1_type -8 216 1 261 291 35 0 chr20 45939557 45939643 -26214239 - MIR SINE MIR -85 123 35 213 361 0 0 chr20 45940079 45940162 -26213720 + MIR SINE MIR 73 149 -59 2153 137 30 24 chr20 45940220 45940593 -26213289 - THE1C LTR MaLR 0 375 1 223 216 40 0 chr20 45940616 45940690 -26213192 + GA-rich Low_complexity Low_complexity 1 77 0 1058 193 0 14 chr20 45941321 45941544 -26212338 - L1MA7 LINE L1 -1 6290 6071 259 250 44 64 chr20 45943006 45943210 -26210672 - L1M4 LINE L1 -759 5387 5188 658 259 123 0 chr20 45944416 45944636 -26209246 - MIR SINE MIR -10 252 6 184 361 12 0 chr20 45944647 45944730 -26209152 - L2 LINE L2 -1362 1952 1869 25 31 0 0 chr20 45946695 45946727 -26207155 + AT_rich Low_complexity Low_complexity 1 32 0 499 303 68 55 chr20 45948759 45949139 -26204743 - L2 LINE L2 0 3313 2929 401 284 62 12 chr20 45949435 45949597 -26204285 - L2 LINE L2 0 3313 3144 386 216 18 30 chr20 45949631 45949798 -26204084 + (TA)n Simple_repeat Simple_repeat 2 166 0 1591 195 7 81 chr20 45949808 45950229 -26203653 - MLT1B LTR MaLR 0 390 1 546 285 113 81 chr20 45951872 45952279 -26201603 + Charlie8 DNA MER1_type 1 420 -1997 264 289 67 0 chr20 45953021 45953125 -26200757 + MIR SINE MIR 138 248 -14 520 288 47 43 chr20 45953456 45953689 -26200193 + MIR SINE MIR 29 262 0 330 313 97 0 chr20 45954131 45954275 -26199607 + MIR SINE MIR 84 241 -21 474 282 67 24 chr20 45954588 45954797 -26199085 + MIR SINE MIR 36 253 -9 400 238 112 14 chr20 45955093 45955236 -26198646 - LTR46 LTR ERV1 -29 431 275 496 238 10 0 chr20 45955320 45955421 -26198461 - LTR46 LTR ERV1 -357 103 2 1318 91 0 0 chr20 45956180 45956345 -26197537 + AluSq SINE Alu 125 289 -24 2863 217 64 30 chr20 45956360 45957129 -26196753 - L1ME1 LINE L1 -5 6161 5367 253 35 0 0 chr20 45958424 45958453 -26195429 - MLT2B1 LTR ERVL 0 515 487 432 0 0 0 chr20 45958453 45958501 -26195381 + (TG)n Simple_repeat Simple_repeat 2 49 0 209 254 33 25 chr20 45958510 45958632 -26195250 + (TTATA)n Simple_repeat Simple_repeat 2 124 0 232 146 56 0 chr20 45958632 45958721 -26195161 + (TA)n Simple_repeat Simple_repeat 1 94 0 271 212 40 0 chr20 45958748 45958847 -26195035 + (TA)n Simple_repeat Simple_repeat 2 104 0 1108 177 65 66 chr20 45958931 45959312 -26194570 - MLT2B1 LTR ERVL -51 469 1 483 242 127 69 chr20 45960410 45960931 -26192951 + L1ME4a LINE L1 5543 6093 -28 343 299 27 33 chr20 45961683 45961903 -26191979 - MIR SINE MIR -27 235 19 205 329 49 21 chr20 45962200 45962343 -26191539 + L2 LINE L2 1846 1992 -1322 1153 174 0 5 chr20 45962374 45962558 -26191324 - LTR40a LTR ERVL 0 519 337 228 179 0 18 chr20 45962965 45963021 -26190861 + T-rich Low_complexity Low_complexity 2 56 0 390 193 353 8 chr20 45964105 45964224 -26189658 + MER5A DNA MER1_type 30 189 0 293 246 303 0 chr20 45964671 45964813 -26189069 + MER5A DNA MER1_type 4 188 -1 282 243 0 14 chr20 45964826 45964896 -26188986 + MIR SINE MIR 100 168 -94 * 693 214 0 109 chr20 45964889 45965015 -26188867 - MER5A DNA MER1_type -7 182 84 2377 90 3 0 chr20 45965015 45965326 -26188556 - AluSp SINE Alu -1 312 1 693 214 0 109 chr20 45965326 45965400 -26188482 - MER5A DNA MER1_type -105 84 4 411 164 0 0 chr20 45965712 45965779 -26188103 - MER5A DNA MER1_type -116 73 7 225 242 33 33 chr20 45965787 45965878 -26188004 + MIR SINE MIR 166 256 -6 243 0 0 0 chr20 45966071 45966098 -26187784 + (A)n Simple_repeat Simple_repeat 1 27 0 898 267 171 8 chr20 45966217 45966603 -26187279 + LTR16A1 LTR ERVL 9 457 0 933 65 0 0 chr20 45966987 45967095 -26186787 - AluY SINE Alu -203 108 1 260 266 73 40 chr20 45967095 45967219 -26186663 + MIR SINE MIR 121 248 -14 204 348 22 11 chr20 45967658 45967747 -26186135 - MIR SINE MIR -89 119 30 1684 175 7 16 chr20 45969402 45969711 -26184171 - AluJo SINE Alu -6 306 1 388 265 12 66 chr20 45970794 45970960 -26182922 - L1ME LINE L1 -457 5664 5508 477 274 72 72 chr20 45971259 45971565 -26182317 + L2 LINE L2 2969 3274 -39 241 284 27 0 chr20 45971578 45971652 -26182230 + MER116 DNA Mariner 5 80 0 1129 113 0 25 chr20 45971896 45972056 -26181826 + AluSx SINE Alu 1 156 -156 1786 100 0 0 chr20 45972056 45972285 -26181597 + AluSx SINE Alu 64 292 -20 598 289 50 5 chr20 45974004 45974222 -26179660 + MIR SINE MIR 30 257 -5 1774 236 51 51 chr20 45974490 45975036 -26178846 - MLT2B3 LTR ERVL -8 546 1 279 353 15 15 chr20 45975943 45976079 -26177803 + MIR SINE MIR 16 151 -111 232 149 95 14 chr20 45976109 45976183 -26177699 + (CATATA)n Simple_repeat Simple_repeat 2 81 0 453 287 8 0 chr20 45976831 45976960 -26176922 - MIR SINE MIR -76 186 57 796 255 168 58 chr20 45977471 45977899 -26175983 - LTR16C LTR ERVL -16 475 1 1005 281 78 50 chr20 45978194 45978262 -26175620 + L2 LINE L2 2519 2584 -729 943 210 58 5 chr20 45978262 45978467 -26175415 - MER58A DNA MER1_type -4 220 5 1005 281 78 50 chr20 45978467 45979172 -26174710 + L2 LINE L2 2584 3305 -8 1125 185 20 5 chr20 45980914 45981114 -26172768 + MER20 DNA MER1_type 1 203 -16 807 295 116 23 chr20 45981560 45981906 -26171976 + MLT1J2 LTR MaLR 73 450 0 239 324 70 16 chr20 45983542 45983727 -26170155 + MIR SINE MIR 16 210 -52 503 259 134 30 chr20 45983844 45984076 -26169806 + MLT1J2 LTR MaLR 119 374 -76 2326 103 0 3 chr20 45984833 45985135 -26168747 + AluSq SINE Alu 1 301 -12 366 346 64 52 chr20 45986057 45986574 -26167308 - MLT1K LTR MaLR -4 584 62 262 261 21 31 chr20 45987082 45987200 -26166682 + CT-rich Low_complexity Low_complexity 2 193 0 1856 148 44 3 chr20 45987392 45987689 -26166193 - AluJb SINE Alu -3 309 1 313 355 41 6 chr20 45987775 45987947 -26165935 - L2 LINE L2 -4 3309 3132 2113 129 14 0 chr20 45987954 45988248 -26165634 - AluSx SINE Alu -14 298 1 222 301 77 21 chr20 45988347 45988490 -26165392 + MIR SINE MIR 47 197 -65 2231 188 19 21 chr20 45988675 45988835 -26165047 - MLT1C LTR MaLR 0 467 308 2229 108 0 3 chr20 45988835 45989130 -26164752 - AluSx SINE Alu -18 294 1 2231 188 19 21 chr20 45989130 45989437 -26164445 - MLT1C LTR MaLR -159 308 1 371 250 116 9 chr20 45989929 45990041 -26163841 + L2 LINE L2 3148 3271 -1 265 270 0 0 chr20 45990177 45990240 -26163642 + L2 LINE L2 2924 2986 -286 218 283 0 0 chr20 45990505 45990565 -26163317 - MIR SINE MIR -106 156 97 411 323 62 34 chr20 45991531 45991822 -26162060 + MLT1I LTR MaLR 79 377 -32 192 193 70 18 chr20 45991866 45991923 -26161959 - MIR SINE MIR -76 186 127 188 371 86 13 chr20 45993862 45994013 -26159869 + L2 LINE L2 2932 3093 -179 898 207 9 38 chr20 45994166 45994379 -26159503 + MER3 DNA MER1_type 1 207 -2 404 348 66 8 chr20 45994514 45994765 -26159117 - L2 LINE L2 -220 3052 2790 885 278 88 23 chr20 45995448 45995800 -26158082 - LTR16A LTR ERVL 0 457 83 243 291 78 0 chr20 45996423 45996526 -26157356 + MIR SINE MIR 125 235 -27 220 252 130 41 chr20 45997786 45997909 -26155973 + MIR SINE MIR 81 214 -48 194 333 71 0 chr20 45997959 45998058 -26155824 + MIR3 SINE MIR 9 114 -94 661 222 56 6 chr20 45998100 45998280 -26155602 + MER5A DNA MER1_type 1 189 0 264 259 76 65 chr20 45998565 45998750 -26155132 - L2 LINE L2 -451 2863 2677 279 272 40 48 chr20 45999821 45999946 -26153936 - MIR SINE MIR -111 151 28 830 189 27 86 chr20 46000057 46000100 -26153782 + MLT1D LTR MaLR 1 45 -460 2016 135 4 0 chr20 46000100 46000421 -26153461 + AluSq SINE Alu 1 322 0 830 189 27 86 chr20 46000421 46000598 -26153284 + MLT1D LTR MaLR 45 209 -296 1715 62 0 0 chr20 46000602 46000812 -26153070 - L1P4 LINE L1 -467 5701 5492 331 151 3 11 chr20 46000812 46000878 -26153004 + MLT1D LTR MaLR 450 503 -2 256 232 59 2 chr20 46000946 46001020 -26152862 + MIR SINE MIR 82 151 -57 227 95 48 0 chr20 46001181 46001223 -26152659 - AluJo/FRAM SINE Alu 0 301 258 1614 99 5 0 chr20 46001224 46001436 -26152446 + AluSq SINE Alu 73 285 -28 297 0 0 0 chr20 46001436 46001469 -26152413 + (CA)n Simple_repeat Simple_repeat 2 34 0 941 215 24 5 chr20 46001469 46001674 -26152208 + MLT1D LTR MaLR 27 235 -270 638 235 0 0 chr20 46001704 46001823 -26152059 - FRAM SINE Alu -53 123 5 528 233 31 0 chr20 46001828 46001957 -26151925 - LTR33 LTR ERVL -66 455 323 387 326 62 31 chr20 46002001 46002194 -26151688 - LTR33 LTR ERVL -309 212 14 401 277 107 0 chr20 46002297 46002409 -26151473 + L2 LINE L2 3190 3313 0 202 341 45 0 chr20 46002485 46002573 -26151309 - MIR SINE MIR -87 121 30 399 290 44 83 chr20 46003288 46003540 -26150342 - MIR SINE MIR -9 253 12 523 269 154 6 chr20 46003647 46003829 -26150053 - MER3 DNA MER1_type 0 209 1 380 147 266 37 chr20 46004209 46004318 -26149564 + MER5A DNA MER1_type 27 160 -29 311 225 176 0 chr20 46006116 46006207 -26147675 + MIR SINE MIR 79 186 -22 386 250 34 61 chr20 46006809 46006957 -26146925 - MIR SINE MIR -41 221 78 250 383 86 10 chr20 46007040 46007353 -26146529 + L2 LINE L2 2012 2348 -966 1382 240 143 51 chr20 46007675 46007912 -26145970 - L1ME3A LINE L1 -80 6159 5945 2380 77 0 13 chr20 46007912 46008223 -26145659 - AluY SINE Alu -4 307 1 1382 240 143 51 chr20 46008223 46009262 -26144620 - L1ME3A LINE L1 -294 5945 4771 306 0 0 0 chr20 46009263 46009297 -26144585 + (TTA)n Simple_repeat Simple_repeat 3 36 0 4271 31 0 0 chr20 46009297 46009786 -26144096 - L1PA4 LINE L1 -18 6137 5649 3369 34 2 0 chr20 46009786 46010224 -26143658 + L1PA4 LINE L1 5213 5651 -504 411 165 24 35 chr20 46010457 46010542 -26143340 - L1MC1 LINE L1 0 6333 6250 620 283 86 60 chr20 46010559 46011937 -26141945 - L1MEc LINE L1 -1447 4768 34 246 331 39 33 chr20 46012252 46012433 -26141449 - MIR3 SINE MIR 0 208 27 2594 159 21 2 chr20 46012434 46012854 -26141028 - MSTA LTR MaLR 0 428 1 1242 263 127 17 chr20 46013156 46013295 -26140587 - L1MC4a LINE L1 -1633 6175 6053 387 105 0 0 chr20 46013295 46013352 -26140530 + (TG)n Simple_repeat Simple_repeat 2 58 0 1242 263 127 17 chr20 46013352 46013802 -26140080 - L1MC4a LINE L1 -1755 6053 5521 209 351 90 0 chr20 46013830 46013964 -26139918 - MIR3 SINE MIR -25 183 38 358 343 21 7 chr20 46014514 46014654 -26139228 + MIR SINE MIR 10 151 -111 309 229 115 25 chr20 46014663 46014785 -26139097 - MLT1I LTR MaLR 0 409 277 2146 163 72 17 chr20 46014800 46015204 -26138678 - MSTB LTR MaLR 0 426 1 8997 181 18 10 chr20 46015204 46016842 -26137040 - MSTB-int LTR MaLR 0 1651 1 2131 176 69 10 chr20 46016842 46017234 -26136648 - MSTB LTR MaLR 0 426 12 584 275 40 13 chr20 46017245 46017394 -26136488 - MLT1I LTR MaLR -153 256 104 224 270 48 40 chr20 46017592 46017718 -26136164 - MIR SINE MIR -77 185 59 22 35 0 0 chr20 46018192 46018221 -26135661 + AT_rich Low_complexity Low_complexity 1 29 0 2111 222 160 108 chr20 46018473 46018680 -26135202 - MLT1E3 LTR MaLR 0 624 429 653 221 0 8 chr20 46018680 46018807 -26135075 - FLAM_A SINE Alu -7 126 1 2111 222 160 108 chr20 46018807 46019217 -26134665 - MLT1E3 LTR MaLR -195 429 5 2036 156 43 63 chr20 46019239 46019701 -26134181 - MLT1C LTR MaLR -2 465 13 349 204 68 53 chr20 46020045 46020177 -26133705 - LTR33A LTR ERVL -6 517 384 459 35 0 0 chr20 46020231 46020246 -26133636 + (CA)n Simple_repeat Simple_repeat 1 72 0 459 35 0 0 chr20 46020246 46020303 -26133579 + (CA)n Simple_repeat Simple_repeat 2 58 0 270 214 179 34 chr20 46020340 46020457 -26133425 - LTR33A LTR ERVL -333 190 57 579 243 7 26 chr20 46021101 46021253 -26132629 + LTR7 LTR ERV1 302 450 0 2105 126 3 0 chr20 46021269 46021555 -26132327 - AluSp SINE Alu -26 287 1 2254 253 48 7 chr20 46022050 46022640 -26131242 - MER90 LTR ERV1 0 614 1 284 273 20 30 chr20 46022759 46022858 -26131024 + MIR3 SINE MIR 83 180 -28 249 108 31 31 chr20 46023040 46023105 -26130777 + T-rich Low_complexity Low_complexity 5 69 0 237 146 0 0 chr20 46023232 46023280 -26130602 + (TC)n Simple_repeat Simple_repeat 1 48 0 345 257 92 48 chr20 46023380 46023602 -26130280 - MLT1K LTR MaLR -357 231 13 240 297 25 17 chr20 46023677 46023795 -26130087 + MIR3 SINE MIR 55 173 -35 228 263 105 0 chr20 46024505 46024581 -26129301 + MIR SINE MIR 61 144 -118 400 248 87 7 chr20 46025672 46025821 -26128061 - MIR3 SINE MIR -25 183 23 185 233 165 39 chr20 46026681 46026784 -26127098 - L2 LINE L2 -40 3232 3117 333 125 0 0 chr20 46027583 46027639 -26126243 + (TTCA)n Simple_repeat Simple_repeat 3 58 0 181 241 69 17 chr20 46027716 46027774 -26126108 + L2 LINE L2 3212 3272 0 601 258 66 0 chr20 46027783 46027950 -26125932 - MER5B DNA MER1_type 0 178 1 207 204 0 0 chr20 46029317 46029361 -26124521 + T-rich Low_complexity Low_complexity 1 44 0 586 256 120 17 chr20 46029477 46029711 -26124171 - MLT1F1 LTR MaLR 0 567 310 2347 91 0 0 chr20 46029724 46030020 -26123862 + AluY SINE Alu 1 296 -15 242 273 27 15 chr20 46030108 46030370 -26123512 + GA-rich Low_complexity Low_complexity 1 265 0 524 277 29 18 chr20 46030371 46030561 -26123321 - MLT1E LTR MaLR -369 198 10 894 219 62 4 chr20 46031194 46031436 -26122446 + L1MD2 LINE L1 5094 5349 -797 379 81 0 16 chr20 46031436 46031498 -26122384 - AluJ/FLAM SINE Alu -241 61 1 484 228 73 23 chr20 46031517 46031681 -26122201 + MLT1F1 LTR MaLR 317 525 -68 2546 199 78 56 chr20 46031682 46032141 -26121741 + L1MD2 LINE L1 5380 5860 -499 2581 74 0 0 chr20 46032141 46032452 -26121430 + AluY SINE Alu 1 311 0 2546 199 78 56 chr20 46032452 46032656 -26121226 + L1MD2 LINE L1 5860 6058 -301 1248 271 50 53 chr20 46032684 46033397 -26120485 - L1M4 LINE L1 -1062 5084 4374 537 281 50 66 chr20 46033405 46033647 -26120235 - L1ME3 LINE L1 -8 6162 5925 1565 293 91 8 chr20 46033649 46034376 -26119506 - L1M4 LINE L1 -1817 4329 3543 347 303 59 0 chr20 46035588 46035707 -26118175 - MIR SINE MIR -72 190 65 1447 183 222 26 chr20 46036489 46036904 -26116978 - MLT1D LTR MaLR 0 505 10 354 188 29 0 chr20 46036914 46036983 -26116899 - LTR1B LTR ERV1 0 826 756 2237 178 49 28 chr20 46036990 46037457 -26116425 - LTR1B LTR ERV1 -349 477 1 468 242 133 0 chr20 46037742 46037870 -26116012 + MIR SINE MIR 17 161 -101 426 277 87 2 chr20 46037874 46038130 -26115752 - LTR33A LTR ERVL -2 666 320 535 263 165 22 chr20 46038257 46038481 -26115401 - LTR50 LTR ERVL -539 256 1 310 305 51 0 chr20 46038484 46038602 -26115280 + MIR SINE MIR 118 241 -21 499 266 21 7 chr20 46039392 46039535 -26114347 - MIR SINE MIR -25 237 93 603 254 66 96 chr20 46039551 46039687 -26114195 - LTR16C LTR ERVL -4 487 348 2369 81 0 34 chr20 46039687 46040007 -26113875 + AluSc SINE Alu 1 309 0 603 254 66 96 chr20 46040007 46040204 -26113678 - LTR16C LTR ERVL -143 348 164 327 311 51 51 chr20 46041116 46041373 -26112509 - HAL1b LINE L1 -659 689 433 294 286 39 10 chr20 46041384 46041541 -26112341 + MIR SINE MIR 7 220 -42 392 309 24 78 chr20 46041626 46041921 -26111961 - HAL1 LINE L1 -982 1525 1247 2092 118 28 0 chr20 46042121 46042408 -26111474 - AluSx SINE Alu -17 295 1 2022 128 0 0 chr20 46042901 46043214 -26110668 + AluSx SINE Alu 1 313 0 338 298 144 6 chr20 46044191 46044372 -26109510 - L1ME2 LINE L1 0 6164 5959 906 210 72 40 chr20 46044376 46044652 -26109230 - L1ME2 LINE L1 -97 6067 5783 450 352 60 30 chr20 46045879 46046177 -26107705 + L3 LINE CR1 76 382 -1195 517 293 79 30 chr20 46046525 46046791 -26107091 + L1ME4a LINE L1 5606 5884 -237 239 300 12 0 chr20 46046904 46046984 -26106898 + T-rich Low_complexity Low_complexity 5 85 0 2138 124 0 9 chr20 46047875 46048190 -26105692 + AluSx SINE Alu 1 312 0 219 395 9 35 chr20 46049767 46049881 -26104001 - MIR SINE MIR -65 143 33 234 0 0 0 chr20 46049914 46049940 -26103942 + (GA)n Simple_repeat Simple_repeat 2 27 0 444 250 0 0 chr20 46050309 46050401 -26103481 + Tigger4(Zombi) DNA MER2_type 1 92 -2639 * 5292 129 32 9 chr20 46050392 46051230 -26102652 + Tigger4(Zombi) DNA MER2_type 1872 2728 -3 773 225 16 39 chr20 46052634 46052678 -26101204 + MER5A DNA MER1_type 1 44 -145 1990 194 73 3 chr20 46052678 46053019 -26100863 + MLT1A1 LTR MaLR 1 365 0 773 225 16 39 chr20 46053019 46053156 -26100726 + MER5A DNA MER1_type 44 178 -11 247 242 0 30 chr20 46053469 46053535 -26100347 - L2 LINE L2 -1 3271 3208 3669 75 23 0 chr20 46053964 46054407 -26099475 - MLT2A2 LTR ERVL 0 453 1 204 253 229 12 chr20 46054449 46054532 -26099350 - L2 LINE L2 -954 2360 2260 275 318 0 0 chr20 46055087 46055175 -26098707 - L3 LINE CR1 -104 1473 1386 297 360 76 18 chr20 46056041 46056266 -26097616 + MIR SINE MIR 20 257 -5 215 288 0 27 chr20 46056846 46056919 -26096963 + MIR SINE MIR 103 173 -89 2403 48 0 61 chr20 46057474 46057785 -26096097 + AluY SINE Alu 6 297 -14 1299 207 79 19 chr20 46058278 46058810 -26095072 + LTR36 LTR ERV1 1 611 0 274 306 144 29 chr20 46059066 46059239 -26094643 - MIR SINE MIR -20 242 50 621 283 8 33 chr20 46059271 46059511 -26094371 + L1ME4a LINE L1 3758 3991 -2155 555 270 87 54 chr20 46059569 46059961 -26093921 + L1ME4a LINE L1 4254 4658 -1488 208 323 104 10 chr20 46060204 46060300 -26093582 - MIR SINE MIR -6 256 152 7981 25 12 3 chr20 46060373 46061724 -26092158 - L1PA4 LINE L1 0 6155 4799 710 111 20 0 chr20 46061744 46061843 -26092039 + AluJo SINE Alu 35 135 -177 357 323 136 17 chr20 46062203 46062497 -26091385 + L1ME4a LINE L1 5256 5584 -2224 663 256 28 43 chr20 46062502 46062756 -26091126 + L1ME4a LINE L1 5649 5898 -223 243 250 15 15 chr20 46063407 46063475 -26090407 + L1MC4 LINE L1 6636 6703 -1339 276 30 0 0 chr20 46063479 46063512 -26090370 + (CA)n Simple_repeat Simple_repeat 2 34 0 287 308 60 8 chr20 46063786 46063903 -26089979 + MIR SINE MIR 50 172 -90 372 239 167 7 chr20 46063981 46064119 -26089763 - MIR SINE MIR -87 175 16 196 243 0 0 chr20 46064139 46064176 -26089706 + L2 LINE L2 3217 3253 -19 2148 128 3 0 chr20 46065330 46065636 -26088246 + AluSg SINE Alu 1 307 -3 371 300 80 27 chr20 46065682 46065832 -26088050 + L2 LINE L2 3156 3313 0 226 218 59 20 chr20 46065852 46065953 -26087929 - L1ME4a LINE L1 -28 6093 5989 261 325 35 35 chr20 46066363 46066566 -26087316 - MIR SINE MIR -46 216 14 251 265 48 42 chr20 46067373 46067539 -26086343 - L1ME4a LINE L1 -11 6110 5944 3224 215 26 28 chr20 46067764 46068410 -26085472 - MER82 DNA MER2_type -4 649 5 326 341 99 50 chr20 46068425 46068481 -26085401 - L2 LINE L2 -1054 2260 2208 1279 179 80 87 chr20 46068481 46068906 -26084976 - LTR37A LTR ERV1 0 426 5 326 341 99 50 chr20 46068906 46069166 -26084716 - L2 LINE L2 -1106 2208 1921 2619 121 11 0 chr20 46069166 46069537 -26084345 - THE1C LTR MaLR 0 375 1 326 341 99 50 chr20 46069537 46069583 -26084299 - L2 LINE L2 -1393 1921 1879 341 292 108 20 chr20 46069672 46069867 -26084015 - L1ME4a LINE L1 -317 5804 5593 183 281 53 35 chr20 46070456 46070570 -26083312 + L2 LINE L2 2094 2209 -1105 2153 117 0 13 chr20 46070971 46071271 -26082611 - AluSx SINE Alu -16 296 1 534 303 58 14 chr20 46071654 46071862 -26082020 + MIR SINE MIR 42 258 -4 202 280 28 103 chr20 46073055 46073087 -26080795 + L2 LINE L2 3151 3184 -88 2804 97 19 11 chr20 46073087 46073459 -26080423 - THE1C LTR MaLR 0 375 1 202 280 28 103 chr20 46073459 46073533 -26080349 + L2 LINE L2 3184 3249 -23 197 294 15 44 chr20 46074105 46074173 -26079709 + L2 LINE L2 3247 3312 -1 2291 115 0 3 chr20 46074401 46074714 -26079168 - AluSx SINE Alu 0 312 1 452 229 130 43 chr20 46074715 46074855 -26079027 - MIR SINE MIR -58 150 3 401 305 75 27 chr20 46074935 46075122 -26078760 + MIR SINE MIR 56 251 -11 292 213 238 12 chr20 46076231 46076311 -26077571 + MIR SINE MIR 47 144 -118 431 189 183 67 chr20 46076317 46076481 -26077401 + MLT1J LTR MaLR 2 184 -327 2720 91 5 57 chr20 46077047 46077360 -26076522 + THE1B LTR MaLR 1 292 -72 2391 78 0 25 chr20 46077360 46077679 -26076203 + AluY SINE Alu 1 311 0 2720 91 5 57 chr20 46077679 46077749 -26076133 + THE1B LTR MaLR 292 364 0 304 287 61 26 chr20 46079094 46079209 -26074673 - L2 LINE L2 -1 3271 3153 1786 163 10 13 chr20 46079282 46079595 -26074287 + AluJo SINE Alu 1 312 0 296 252 113 0 chr20 46079599 46079714 -26074168 - LTR16A1 LTR ERVL 0 457 330 1024 221 25 0 chr20 46079768 46079972 -26073910 + MER3 DNA MER1_type 1 209 0 967 214 46 0 chr20 46079983 46080179 -26073703 - MER58A DNA MER1_type -4 220 16 276 307 31 61 chr20 46080220 46080448 -26073434 - LTR16A1 LTR ERVL -236 221 1 225 327 0 37 chr20 46080448 46080555 -26073327 - MIR SINE MIR -4 258 156 366 61 0 0 chr20 46080675 46080724 -26073158 + (CA)n Simple_repeat Simple_repeat 2 50 0 858 231 206 18 chr20 46080910 46081191 -26072691 - LTR16C LTR ERVL 0 491 158 263 232 0 0 chr20 46081509 46081565 -26072317 + MIR SINE MIR 95 150 -112 232 345 99 18 chr20 46082142 46082313 -26071569 - L2 LINE L2 -565 2749 2565 508 274 56 51 chr20 46082733 46082862 -26071020 + MIR SINE MIR 9 141 -121 1809 176 17 3 chr20 46082862 46083163 -26070719 + AluJb SINE Alu 1 305 -7 508 274 56 51 chr20 46083163 46083248 -26070634 + MIR SINE MIR 141 224 -38 614 280 64 38 chr20 46083387 46083623 -26070259 - MLT1H LTR MaLR -202 347 106 244 301 96 0 chr20 46083866 46083949 -26069933 + MIR SINE MIR 150 240 -22 215 255 0 0 chr20 46083973 46084024 -26069858 + (TTA)n Simple_repeat Simple_repeat 2 52 0 333 245 53 0 chr20 46084042 46084136 -26069746 - MIR SINE MIR -100 162 64 212 259 19 0 chr20 46084596 46084650 -26069232 - MIR SINE MIR -136 72 18 948 281 82 6 chr20 46085188 46085554 -26068328 + L1ME4a LINE L1 5522 5915 -206 202 95 95 95 chr20 46085593 46085635 -26068247 - MER5A DNA MER1_type -103 86 45 1604 134 69 0 chr20 46085826 46086072 -26067810 + AluSg SINE Alu 25 287 -23 275 312 177 0 chr20 46086304 46086490 -26067392 - L2 LINE L2 -1360 1954 1736 673 264 0 0 chr20 46088355 46088499 -26065383 + MER63A DNA MER1_type 43 186 -24 1213 283 72 22 chr20 46088690 46089215 -26064667 - L2 LINE L2 0 3313 2744 904 258 0 0 chr20 46089250 46089432 -26064450 + MER5A DNA MER1_type 1 182 -7 222 37 0 0 chr20 46089662 46089689 -26064193 + (TTAA)n Simple_repeat Simple_repeat 1 27 0 2124 133 3 0 chr20 46089689 46089975 -26063907 - AluSx SINE Alu -22 290 1 318 253 24 12 chr20 46091454 46091537 -26062345 - L2 LINE L2 -1 3271 3188 550 223 82 114 chr20 46091937 46092121 -26061761 - MLT1J2 LTR MaLR -24 426 245 192 45 23 45 chr20 46092326 46092370 -26061512 + (TTATA)n Simple_repeat Simple_repeat 2 44 0 652 19 107 0 chr20 46092374 46092533 -26061349 + (TA)n Simple_repeat Simple_repeat 2 177 0 373 76 97 0 chr20 46092550 46092694 -26061188 + (TA)n Simple_repeat Simple_repeat 2 159 0 1604 160 48 11 chr20 46092697 46092965 -26060917 - AluSx SINE Alu -34 278 1 305 315 34 0 chr20 46093570 46093659 -26060223 + LTR16A LTR ERVL 16 107 -343 620 206 32 0 chr20 46093659 46093785 -26060097 - MER77 LTR ERV1 0 605 476 241 184 39 48 chr20 46093788 46093891 -26059991 + (TATAA)n Simple_repeat Simple_repeat 3 104 0 1780 206 75 85 chr20 46093893 46093956 -26059926 - MER77 LTR ERV1 -94 511 449 2082 109 49 0 chr20 46093956 46094240 -26059642 + AluSg SINE Alu 1 298 -12 1780 206 75 85 chr20 46094240 46094682 -26059200 - MER77 LTR ERV1 -156 449 11 216 0 0 0 chr20 46094693 46094717 -26059165 + (TTCA)n Simple_repeat Simple_repeat 3 26 0 953 282 61 21 chr20 46094723 46095053 -26058829 + LTR16A LTR ERVL 103 445 -5 2573 175 47 17 chr20 46096059 46096528 -26057354 - MLT1D LTR MaLR 0 505 23 409 294 49 57 chr20 46097452 46097553 -26056329 + MIR SINE MIR 4 104 -158 931 179 129 15 chr20 46097553 46097754 -26056128 - MER58A DNA MER1_type 0 224 1 409 294 49 57 chr20 46097754 46097897 -26055985 + MIR SINE MIR 104 246 -16 191 143 0 24 chr20 46097910 46097952 -26055930 + (TGGA)n Simple_repeat Simple_repeat 4 44 0 1468 174 77 33 chr20 46098907 46099206 -26054676 + AluJo SINE Alu 1 312 0 189 103 0 0 chr20 46102367 46102396 -26051486 + L2 LINE L2 3247 3275 -38 204 67 0 0 chr20 46102443 46102473 -26051409 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 2008 179 136 0 chr20 46103015 46103435 -26050447 - LTR1B LTR ERV1 0 826 350 1225 197 4 32 chr20 46103436 46103685 -26050197 - LTR1B LTR ERV1 -584 242 1 2387 75 3 0 chr20 46103939 46104233 -26049649 + AluY SINE Alu 1 295 -16 335 332 197 9 chr20 46104633 46105292 -26048590 - L2 LINE L2 -996 2318 1536 1235 106 28 11 chr20 46105331 46105511 -26048371 + THE1B LTR MaLR 1 183 -181 43433 36 21 1 chr20 46105511 46111541 -26042341 + L1PA2 LINE L1 1 6153 -2 1190 126 10 55 chr20 46111575 46111774 -26042108 + THE1B LTR MaLR 175 364 0 224 276 31 31 chr20 46111815 46111913 -26041969 - L2 LINE L2 -1884 1430 1333 2430 167 13 36 chr20 46112087 46112536 -26041346 + MLT1C LTR MaLR 29 467 0 611 223 191 38 chr20 46113391 46113710 -26040172 - L1ME4a LINE L1 -30 6091 5724 321 285 58 15 chr20 46114969 46115106 -26038776 + MIR SINE MIR 68 210 -52 3110 186 63 19 chr20 46115106 46115801 -26038081 + L1MB8 LINE L1 5448 6173 -5 920 128 0 0 chr20 46115959 46116092 -26037790 + FLAM_C SINE Alu 1 133 0 183 254 17 17 chr20 46116394 46116453 -26037429 - L3b LINE CR1 -199 1384 1326 266 335 25 19 chr20 46116897 46117058 -26036824 + MIR3 SINE MIR 15 176 -32 2137 139 0 0 chr20 46117105 46117407 -26036475 + AluSx SINE Alu 1 302 -10 519 266 114 38 chr20 46117508 46117964 -26035918 + MLT1G LTR MaLR 1 497 -86 288 277 84 2 chr20 46118328 46118450 -26035432 + MIR SINE MIR 21 148 -60 2476 176 32 2 chr20 46119104 46119575 -26034307 - L1MB3 LINE L1 0 6183 5699 336 191 0 0 chr20 46119827 46119890 -26033992 + MIR SINE MIR 88 150 -112 232 188 0 0 chr20 46120003 46120051 -26033831 + L2 LINE L2 3262 3309 -4 203 260 87 55 chr20 46120529 46120656 -26033226 - MER5A DNA MER1_type -24 165 35 * 356 328 17 0 chr20 46120562 46120678 -26033204 + MER5A DNA MER1_type 71 188 -1 758 273 79 84 chr20 46122786 46123449 -26030433 + L2 LINE L2 2658 3313 0 382 311 23 15 chr20 46123582 46123714 -26030168 - MIR SINE MIR -110 152 20 741 299 17 4 chr20 46123807 46124038 -26029844 + MIR SINE MIR 8 241 -21 266 181 24 24 chr20 46124710 46124793 -26029089 + (TTTA)n Simple_repeat Simple_repeat 3 85 0 2297 201 26 0 chr20 46125553 46126010 -26027872 + L1PB4 LINE L1 5686 6154 -2 24 0 0 0 chr20 46126012 46126036 -26027846 + AT_rich Low_complexity Low_complexity 1 24 0 1897 172 0 0 chr20 46126039 46126361 -26027521 + AluSx SINE Alu 1 312 0 23 33 0 0 chr20 46126363 46126393 -26027489 + AT_rich Low_complexity Low_complexity 1 30 0 214 348 70 27 chr20 46127569 46127756 -26026126 - L2 LINE L2 -33 3239 3045 1894 178 209 65 chr20 46128578 46128676 -26025206 + MLT1E1 LTR MaLR 5 87 -567 2459 145 41 10 chr20 46128676 46129090 -26024792 - MSTA LTR MaLR 0 428 2 1894 178 209 65 chr20 46129090 46129559 -26024323 + MLT1E1 LTR MaLR 87 654 0 298 289 122 31 chr20 46129567 46129854 -26024028 - L1MB3 LINE L1 -2230 5578 5266 1123 168 27 32 chr20 46130990 46131210 -26022672 + MER20 DNA MER1_type 1 219 0 189 246 87 87 chr20 46133188 46133314 -26020568 + L3 LINE CR1 1446 1571 -6 2372 76 13 0 chr20 46134204 46134506 -26019376 + AluY SINE Alu 1 306 -5 432 0 0 0 chr20 46135503 46135551 -26018331 + (CA)n Simple_repeat Simple_repeat 2 49 0 297 258 76 45 chr20 46135948 46136061 -26017821 + L2 LINE L2 3164 3283 -30 1583 226 115 48 chr20 46136061 46136619 -26017263 - MLT1G1 LTR MaLR 0 595 1 297 258 76 45 chr20 46136619 46136637 -26017245 + L2 LINE L2 3283 3299 -14 536 292 120 9 chr20 46137462 46137678 -26016204 + MIR SINE MIR 21 260 -2 1018 175 21 118 chr20 46137752 46138014 -26015868 - MER33 DNA MER1_type -2285 300 75 1973 139 10 16 chr20 46138014 46138317 -26015565 - AluSx SINE Alu -11 301 1 1018 175 21 118 chr20 46138317 46138386 -26015496 - MER33 DNA MER1_type -2510 75 1 272 221 118 53 chr20 46138474 46138638 -26015244 - MIR SINE MIR -48 214 45 202 262 0 16 chr20 46138817 46138878 -26015004 + (CTGGGG)n Simple_repeat Simple_repeat 4 63 0 257 248 208 7 chr20 46139670 46139819 -26014063 + L1MC4a LINE L1 5778 5956 -1852 290 279 0 12 chr20 46140497 46140583 -26013299 + (TATG)n Simple_repeat Simple_repeat 4 88 0 494 245 58 7 chr20 46140797 46140936 -26012946 + MIR SINE MIR 116 261 -1 376 277 59 0 chr20 46141198 46141317 -26012565 - L2 LINE L2 0 3313 3188 471 338 24 35 chr20 46141321 46141648 -26012234 + L1ME3A LINE L1 5373 5698 -423 1266 247 36 93 chr20 46141658 46142232 -26011650 - L2 LINE L2 0 3313 2775 1388 189 23 23 chr20 46142254 46142518 -26011364 - MLT1H1 LTR MaLR -48 507 244 248 278 19 46 chr20 46142634 46142742 -26011140 + L1ME3A LINE L1 5697 5801 -320 239 226 0 0 chr20 46142842 46142895 -26010987 + (TG)n Simple_repeat Simple_repeat 2 54 0 222 287 203 42 chr20 46143881 46144024 -26009858 - MER91A DNA MER1_type -28 168 3 1858 231 92 60 chr20 46144977 46145489 -26008393 - L2 LINE L2 -8 3305 2811 11576 32 8 1 chr20 46145489 46147560 -26006322 + L1PA4 LINE L1 4069 6144 -11 1858 231 92 60 chr20 46147560 46148017 -26005865 - L2 LINE L2 -502 2811 2313 326 331 6 41 chr20 46148041 46148210 -26005672 + MIR SINE MIR 29 191 -71 250 321 75 0 chr20 46148267 46148373 -26005509 + MIR SINE MIR 39 152 -56 423 0 0 0 chr20 46148508 46148555 -26005327 + (CA)n Simple_repeat Simple_repeat 2 48 0 279 0 0 0 chr20 46148610 46148641 -26005241 + (CA)n Simple_repeat Simple_repeat 2 32 0 183 162 0 0 chr20 46149648 46149685 -26004197 + (TAAA)n Simple_repeat Simple_repeat 3 39 0 274 311 222 34 chr20 46150042 46150335 -26003547 - L2 LINE L2 -6 3266 2919 670 289 32 18 chr20 46150441 46150725 -26003157 - L2 LINE L2 -520 2794 2507 547 162 45 72 chr20 46150811 46150922 -26002960 + MER58B DNA MER1_type 234 341 0 2061 115 39 58 chr20 46151394 46151776 -26002106 - THE1C LTR MaLR 0 375 1 2362 81 3 7 chr20 46152433 46152741 -26001141 + AluSg1 SINE Alu 2 308 -1 408 258 126 42 chr20 46153379 46153546 -26000336 - L2 LINE L2 0 3313 3133 584 239 97 58 chr20 46153551 46153777 -26000105 + L1ME3A LINE L1 5934 6168 -2 329 315 73 51 chr20 46153842 46154115 -25999767 - L2 LINE L2 -181 3091 2813 1738 214 26 3 chr20 46154167 46154513 -25999369 + MLT1A1 LTR MaLR 1 354 -11 344 330 16 16 chr20 46154518 46154700 -25999182 - L2 LINE L2 -582 2732 2551 476 254 16 25 chr20 46154765 46154887 -25998995 + L1ME LINE L1 5557 5677 -444 1473 163 28 0 chr20 46154907 46155157 -25998725 - MLT1D LTR MaLR 0 505 261 856 132 5 157 chr20 46155497 46155734 -25998148 + MLT1D LTR MaLR 4 196 -309 205 195 24 0 chr20 46155748 46155789 -25998093 + CT-rich Low_complexity Low_complexity 1 42 0 288 314 76 0 chr20 46156426 46156531 -25997351 + MIR SINE MIR 31 143 -119 187 206 63 32 chr20 46156802 46156865 -25997017 - L3 LINE CR1 -1230 347 283 423 313 8 23 chr20 46157053 46157184 -25996698 - L2 LINE L2 -5 3267 3139 378 226 87 9 chr20 46157233 46157348 -25996534 + MIR SINE MIR 105 228 -34 279 0 0 0 chr20 46157366 46157397 -25996485 + (TA)n Simple_repeat Simple_repeat 1 31 0 2277 113 3 3 chr20 46157401 46157711 -25996171 - AluSg SINE Alu 0 310 1 431 328 26 31 chr20 46158013 46158205 -25995677 + MIR SINE MIR 60 250 -12 2317 99 0 0 chr20 46158212 46158515 -25995367 + AluSg1 SINE Alu 1 303 -6 247 359 84 0 chr20 46158955 46159086 -25994796 - L2 LINE L2 -169 3103 2962 2275 99 0 7 chr20 46159186 46159489 -25994393 - AluSq SINE Alu -12 301 1 874 209 114 35 chr20 46159498 46159752 -25994130 - L1MD3 LINE L1 -1 7994 7721 398 282 53 44 chr20 46159777 46159983 -25993899 - MLT1J1 LTR MaLR -132 314 107 357 117 0 50 chr20 46159990 46160050 -25993832 + L1MC1 LINE L1 6267 6323 -10 1753 174 23 0 chr20 46160050 46160349 -25993533 + AluJb SINE Alu 1 306 -6 349 21 43 0 chr20 46160358 46160405 -25993477 - L1PA4 LINE L1 -1 6154 6106 228 276 146 8 chr20 46160424 46160547 -25993335 - MLT1J LTR MaLR -371 140 1 1374 239 36 12 chr20 46161489 46161716 -25992166 + MER2 DNA MER2_type 1 240 -105 2360 56 0 43 chr20 46161716 46162020 -25991862 - L1PA8 LINE L1 -8 6164 5874 1374 239 36 12 chr20 46162020 46162127 -25991755 + MER2 DNA MER2_type 240 343 -2 1046 274 95 0 chr20 46162304 46162629 -25991253 + MLT1J2 LTR MaLR 50 405 -45 716 310 117 16 chr20 46162734 46163314 -25990568 - L1ME4a LINE L1 -224 5897 5255 1627 241 46 24 chr20 46163860 46164362 -25989520 + L1ME3 LINE L1 5641 6153 -9 261 246 18 0 chr20 46164398 46164455 -25989427 - MIR SINE MIR -64 144 87 755 223 18 82 chr20 46165905 46166125 -25987757 + MER20 DNA MER1_type 14 219 0 561 300 71 6 chr20 46166127 46166297 -25987585 - LTR33 LTR ERVL -270 251 71 3834 104 50 9 chr20 46167935 46168495 -25985387 + L1PA13 LINE L1 5579 6161 -2 298 291 68 10 chr20 46169185 46169288 -25984594 + L2 LINE L2 3204 3312 -1 293 290 75 19 chr20 46169792 46169899 -25983983 + MIR SINE MIR 24 136 -126 236 263 111 40 chr20 46169999 46170098 -25983784 + MIR SINE MIR 40 145 -63 331 217 14 0 chr20 46170388 46170457 -25983425 + MIR SINE MIR 66 135 -73 217 245 20 0 chr20 46170455 46170504 -25983378 + L2 LINE L2 2999 3048 -265 * 391 265 107 79 chr20 46170513 46170830 -25983052 - MLT1I LTR MaLR -13 396 71 344 269 21 97 chr20 46170949 46171187 -25982695 + L2 LINE L2 3046 3265 -48 1075 251 60 55 chr20 46171489 46171887 -25981995 - Tigger8 DNA MER2_type -19 647 248 286 367 27 7 chr20 46171912 46172059 -25981823 - L2 LINE L2 0 3272 3123 237 98 0 78 chr20 46172175 46172226 -25981656 - L1PB3 LINE L1 0 6154 6108 * 269 163 0 0 chr20 46172218 46172261 -25981621 + L1PB3 LINE L1 5942 5984 -170 233 353 92 20 chr20 46172452 46172701 -25981181 + L2 LINE L2 2373 2639 -675 451 268 119 82 chr20 46173286 46173763 -25980119 - L1ME LINE L1 -362 5759 5265 463 291 89 14 chr20 46175329 46175542 -25978340 - MIR SINE MIR -13 249 21 267 278 10 21 chr20 46175985 46176082 -25977800 - MLT1K LTR MaLR -13 575 480 271 302 91 24 chr20 46177367 46177619 -25976263 - L1ME LINE L1 -504 5658 5390 648 304 98 30 chr20 46177650 46178745 -25975137 - L1ME LINE L1 -786 5360 4146 3275 170 33 15 chr20 46179346 46179928 -25973954 + Tigger1 DNA MER2_type 1 593 -1825 2219 171 16 12 chr20 46179928 46180360 -25973522 + MER57B LTR ERV1 1 434 0 377 172 0 0 chr20 46180360 46180418 -25973464 + Tigger1 DNA MER2_type 579 636 -1782 781 202 8 0 chr20 46181527 46181656 -25972226 + FLAM_C SINE Alu 2 131 -12 10804 134 11 4 chr20 46181935 46183595 -25970287 + Tigger1 DNA MER2_type 645 2316 -102 1047 268 131 36 chr20 46183602 46184189 -25969693 - L1MC4a LINE L1 -1911 5897 5255 2700 107 20 3 chr20 46184234 46184589 -25969293 - THE1B LTR MaLR -3 361 1 59 15 0 0 chr20 46184619 46184685 -25969197 + AT_rich Low_complexity Low_complexity 1 66 0 24 0 0 0 chr20 46185329 46185353 -25968529 + AT_rich Low_complexity Low_complexity 1 24 0 3532 239 96 50 chr20 46185353 46186929 -25966953 - HAL1 LINE L1 -7 2500 853 298 125 0 0 chr20 46187051 46187091 -25966791 - 5S rRNA rRNA -26 95 56 334 352 88 54 chr20 46187298 46187684 -25966198 - L2 LINE L2 -2 3270 2872 620 237 13 124 chr20 46188235 46188513 -25965369 + MIR SINE MIR 17 262 0 490 360 18 6 chr20 46188679 46188843 -25965039 + L2 LINE L2 3103 3268 -4 331 271 136 0 chr20 46188846 46188964 -25964918 + MIR SINE MIR 20 153 -109 330 321 22 27 chr20 46189382 46189566 -25964316 - L1MC4a LINE L1 -1922 5886 5704 302 281 123 66 chr20 46189603 46189832 -25964050 - L1MC4a LINE L1 -584 5582 5353 272 277 42 48 chr20 46189832 46189984 -25963898 - MIR SINE MIR -62 146 39 233 365 60 15 chr20 46190053 46190253 -25963629 + MIR SINE MIR 34 242 -20 2178 142 14 11 chr20 46190992 46191345 -25962537 - L1PA15 LINE L1 -9 6156 5803 428 327 22 40 chr20 46191373 46191578 -25962304 + MIR SINE MIR 51 249 -13 249 282 83 58 chr20 46191601 46191757 -25962125 - MIR SINE MIR -74 188 29 2497 68 0 10 chr20 46191820 46192127 -25961755 - AluY SINE Alu -7 304 1 798 225 64 17 chr20 46192721 46192952 -25960930 - MIR SINE MIR -12 250 10 1295 203 0 28 chr20 46193816 46194067 -25959815 + AluJo SINE Alu 46 289 -23 256 223 204 10 chr20 46194166 46194269 -25959613 - MIR SINE MIR -44 218 96 194 324 19 28 chr20 46194578 46194686 -25959196 + MIR3 SINE MIR 91 197 -11 222 37 0 0 chr20 46196604 46196631 -25957251 + (T)n Simple_repeat Simple_repeat 1 27 0 2027 137 3 3 chr20 46196692 46196992 -25956890 + AluSx SINE Alu 1 300 -12 257 242 10 91 chr20 46198065 46198164 -25955718 - L2 LINE L2 0 3313 3223 519 315 129 9 chr20 46198213 46198532 -25955350 - L2 LINE L2 -224 3048 2693 2614 58 0 0 chr20 46199216 46199527 -25954355 + AluY SINE Alu 1 311 0 372 289 53 50 chr20 46200092 46200449 -25953433 + HAL1b LINE L1 36 393 -955 365 394 24 5 chr20 46200467 46200675 -25953207 + HAL1 LINE L1 1506 1717 -790 369 276 103 0 chr20 46200921 46201066 -25952816 + L1ME3A LINE L1 98 257 -5862 1433 183 43 18 chr20 46201193 46201472 -25952410 + AluJb SINE Alu 1 286 -26 359 296 81 40 chr20 46201556 46202020 -25951862 + L1ME3A LINE L1 942 1467 -4843 1038 196 0 0 chr20 46202471 46202639 -25951243 - FAM SINE Alu -7 168 1 1934 139 3 17 chr20 46203718 46204013 -25949869 + AluSx SINE Alu 1 291 -21 22 35 0 0 chr20 46204176 46204205 -25949677 + AT_rich Low_complexity Low_complexity 1 29 0 589 325 40 12 chr20 46204529 46204858 -25949024 + HAL1b LINE L1 301 638 -710 375 254 6 12 chr20 46205326 46205499 -25948383 + (TAGA)n Simple_repeat Simple_repeat 4 175 0 1043 198 4 46 chr20 46205547 46205590 -25948292 + L1MD3 LINE L1 6620 6663 -1332 423 0 0 0 chr20 46205590 46205637 -25948245 + (TCTA)n Simple_repeat Simple_repeat 1 47 0 1043 198 4 46 chr20 46205637 46205648 -25948234 + L1MD3 LINE L1 6663 6673 -1322 210 71 0 0 chr20 46205648 46205676 -25948206 + (TA)n Simple_repeat Simple_repeat 2 29 0 1043 198 4 46 chr20 46205676 46205858 -25948024 + L1MD3 LINE L1 6673 6847 -1148 275 284 96 61 chr20 46206070 46206267 -25947615 + L1ME3A LINE L1 5962 6165 -5 629 299 75 12 chr20 46206372 46206773 -25947109 + L1ME3A LINE L1 2264 2689 -3440 2478 191 41 6 chr20 46207028 46207567 -25946315 + L1MD1 LINE L1 5670 6227 -15 496 283 211 21 chr20 46207578 46208013 -25945869 + L1ME3A LINE L1 2925 3442 -2687 305 268 62 53 chr20 46208281 46208524 -25945358 + L1ME3A LINE L1 2374 2618 -3528 1268 300 93 20 chr20 46208551 46209619 -25944263 + L1ME3A LINE L1 2681 3826 -2320 1104 260 94 60 chr20 46209716 46210213 -25943669 + L1ME3A LINE L1 5521 6050 -120 4605 17 0 0 chr20 46210213 46210741 -25943141 - L1PA2 LINE L1 -2 6153 5626 1104 260 94 60 chr20 46210741 46210862 -25943020 + L1ME3A LINE L1 6050 6165 -5 2137 119 7 0 chr20 46210979 46211272 -25942610 - AluSg SINE Alu -11 299 5 266 277 81 27 chr20 46211298 46211446 -25942436 + L1ME3A LINE L1 4440 4595 -1534 275 258 103 0 chr20 46211536 46211633 -25942249 + L1ME3A LINE L1 4724 4830 -1299 358 269 7 14 chr20 46211885 46212030 -25941852 + L1ME3A LINE L1 5144 5287 -842 677 314 60 24 chr20 46212120 46212617 -25941265 + L1ME3A LINE L1 5399 5913 -240 342 0 0 0 chr20 46213239 46213277 -25940605 + (CA)n Simple_repeat Simple_repeat 2 39 0 2234 109 0 0 chr20 46213319 46213633 -25940249 + AluSq SINE Alu 1 314 0 1851 251 64 23 chr20 46213695 46214330 -25939552 + L1MD2 LINE L1 5480 6130 -35 2263 140 43 38 chr20 46215191 46215613 -25938269 - MSTC LTR MaLR -4 424 1 182 229 0 0 chr20 46216653 46216688 -25937194 + L2 LINE L2 3277 3311 -2 25 31 0 0 chr20 46216921 46216953 -25936929 + AT_rich Low_complexity Low_complexity 1 32 0 425 86 27 113 chr20 46216956 46217142 -25936740 + (TTAAA)n Simple_repeat Simple_repeat 2 171 0 425 86 27 113 chr20 46217154 46217340 -25936542 + (TTAAA)n Simple_repeat Simple_repeat 2 171 0 418 91 27 112 chr20 46217352 46217598 -25936284 + (TTAAA)n Simple_repeat Simple_repeat 1 224 0 738 218 109 16 chr20 46217753 46217946 -25935936 + MIR SINE MIR 31 241 -21 196 283 193 48 chr20 46217988 46218133 -25935749 - MIR SINE MIR -76 186 21 207 0 0 0 chr20 46218328 46218351 -25935531 + (CA)n Simple_repeat Simple_repeat 2 24 0 241 298 106 40 chr20 46218819 46218970 -25934912 - MIR SINE MIR -6 256 96 290 272 113 31 chr20 46218972 46219167 -25934715 + MLT1I LTR MaLR 2 212 -197 341 234 11 21 chr20 46219335 46219429 -25934453 + MLT1I LTR MaLR 294 386 -23 282 148 27 164 chr20 46220184 46220367 -25933515 - Charlie7 DNA MER1_type -15 2597 2440 2104 126 0 0 chr20 46220877 46221163 -25932719 + AluSx SINE Alu 1 286 -26 21 57 0 0 chr20 46221235 46221270 -25932612 + AT_rich Low_complexity Low_complexity 1 35 0 465 301 24 26 chr20 46221741 46222120 -25931762 + L1ME3A LINE L1 2148 2525 -3621 195 42 0 0 chr20 46222145 46222169 -25931713 + (TTCA)n Simple_repeat Simple_repeat 3 26 0 793 312 128 15 chr20 46222314 46222711 -25931171 - L2 LINE L2 -32 3281 2840 674 288 65 27 chr20 46222721 46223356 -25930526 + L1ME3A LINE L1 2558 3216 -2930 672 296 24 70 chr20 46223484 46223995 -25929887 + L1ME3A LINE L1 5461 5947 -223 390 21 0 0 chr20 46224030 46224077 -25929805 + (TG)n Simple_repeat Simple_repeat 2 48 0 474 292 74 24 chr20 46224345 46224636 -25929246 + L1ME3A LINE L1 3404 3710 -2436 1683 246 70 23 chr20 46224699 46224752 -25929130 + L1ME3A LINE L1 5541 5590 -580 944 236 37 0 chr20 46224752 46224968 -25928914 - MER58A DNA MER1_type 0 224 1 1683 246 70 23 chr20 46224968 46225515 -25928367 + L1ME3A LINE L1 5590 6169 -1 351 281 81 75 chr20 46225554 46226138 -25927744 + L1ME3A LINE L1 3802 4388 -1758 * 362 251 171 11 chr20 46226122 46226297 -25927585 + L1ME3A LINE L1 5968 6170 0 332 226 110 13 chr20 46226294 46226449 -25927433 + L1ME3A LINE L1 4372 4541 -1605 * 345 270 44 0 chr20 46226480 46226617 -25927265 + L1ME3A LINE L1 5743 5885 -285 14574 137 35 69 chr20 46226639 46226889 -25926993 + Tigger2 DNA MER2_type 1 258 -2460 2210 111 7 0 chr20 46226889 46227186 -25926696 + AluSq SINE Alu 1 299 -14 14574 137 35 69 chr20 46227186 46227399 -25926483 + Tigger2 DNA MER2_type 258 477 -2241 5521 110 18 31 chr20 46227399 46228282 -25925600 - MER4D LTR ERV1 0 872 1 14574 137 35 69 chr20 46228282 46228897 -25924985 + Tigger2 DNA MER2_type 477 1111 -1607 646 231 15 0 chr20 46228897 46229031 -25924851 + FLAM_A SINE Alu 1 136 -6 14574 137 35 69 chr20 46229031 46230631 -25923251 + Tigger2 DNA MER2_type 1111 2718 0 348 274 21 0 chr20 46231293 46231388 -25922494 + MIR3 SINE MIR 106 202 -6 253 203 0 0 chr20 46231572 46231631 -25922251 - L1ME4a LINE L1 -4 6117 6059 424 281 98 78 chr20 46231676 46232011 -25921871 - L2 LINE L2 0 3313 2972 455 273 21 28 chr20 46232926 46233069 -25920813 + MIR SINE MIR 111 252 -10 216 196 33 0 chr20 46233119 46233166 -25920716 - MIR SINE MIR -37 171 119 439 296 146 19 chr20 46233166 46233372 -25920510 + MIR SINE MIR 4 235 -27 687 265 65 22 chr20 46233629 46233950 -25919932 + L1ME LINE L1 2684 3018 -3128 3349 187 19 15 chr20 46233990 46234673 -25919209 + L1MD2 LINE L1 5360 6045 -314 758 217 92 109 chr20 46234673 46234976 -25918906 - MLT1A1 LTR MaLR 0 365 68 1362 210 23 4 chr20 46234976 46235238 -25918644 + Tigger7 DNA MER2_type 1 267 -466 364 244 142 35 chr20 46235238 46235492 -25918390 + L1ME LINE L1 3663 3943 -2203 * 395 242 0 11 chr20 46235465 46235556 -25918326 + L1MC/D LINE L1 5677 5766 -593 729 299 95 32 chr20 46235561 46236670 -25917212 + L1ME LINE L1 3917 5093 -1053 23 0 0 0 chr20 46236948 46236971 -25916911 + AT_rich Low_complexity Low_complexity 1 23 0 585 271 49 9 chr20 46236971 46237274 -25916608 - MLT1I LTR MaLR -6 403 3 523 41 14 0 chr20 46237301 46237374 -25916508 + L1PA4 LINE L1 6079 6152 -3 459 0 0 0 chr20 46237419 46237470 -25916412 + (CA)n Simple_repeat Simple_repeat 2 52 0 2083 115 51 0 chr20 46237499 46237795 -25916087 - AluSp SINE Alu -1 312 2 352 372 51 26 chr20 46237855 46238464 -25915418 + L1ME LINE L1 5268 5892 -270 1766 188 176 0 chr20 46238648 46239074 -25914808 - MLT1D LTR MaLR 0 505 5 242 246 0 0 chr20 46239822 46239883 -25913999 + MLT1F1 LTR MaLR 494 554 -13 189 307 184 18 chr20 46239906 46240020 -25913862 - MIR SINE MIR -58 204 72 267 218 103 0 chr20 46241685 46241763 -25912119 - LTR50 LTR ERVL 0 795 710 1935 249 64 17 chr20 46241768 46242301 -25911581 + MER119 DNA MER1_type 5 562 -21 280 258 109 39 chr20 46242304 46242432 -25911450 - LTR50 LTR ERVL -88 707 571 * 563 210 157 3 chr20 46242427 46242718 -25911164 - LTR50 LTR ERVL -384 411 4 2076 119 14 3 chr20 46243014 46243308 -25910574 + AluSx SINE Alu 1 297 -15 280 380 80 0 chr20 46243555 46243668 -25910214 + L2 LINE L2 3136 3257 -15 585 254 43 73 chr20 46243769 46244001 -25909881 + L2 LINE L2 3065 3289 -24 315 49 0 0 chr20 46244673 46244714 -25909168 + (TG)n Simple_repeat Simple_repeat 1 41 0 646 212 7 44 chr20 46244759 46244896 -25908986 + AluJo SINE Alu 44 175 -137 777 195 0 53 chr20 46245279 46245448 -25908434 + MER58B DNA MER1_type 167 326 -15 195 292 214 0 chr20 46245886 46245975 -25907907 + L2 LINE L2 3160 3267 -5 246 280 42 59 chr20 46246199 46246317 -25907565 - MIR SINE MIR -61 201 86 1193 185 83 5 chr20 46246616 46246832 -25907050 - MER46A DNA MER2_type 0 236 4 198 143 0 0 chr20 46247560 46247595 -25906287 + (TTTA)n Simple_repeat Simple_repeat 3 37 0 193 336 131 0 chr20 46247780 46247902 -25905980 - L2 LINE L2 -218 3054 2917 291 284 49 31 chr20 46248243 46248405 -25905477 - MER115 DNA AcHobo -245 448 284 381 287 64 32 chr20 46248447 46248635 -25905247 - MER115 DNA AcHobo -492 201 8 25 0 0 0 chr20 46249077 46249102 -25904780 + AT_rich Low_complexity Low_complexity 1 25 0 333 302 36 14 chr20 46249367 46249506 -25904376 + MER115 DNA AcHobo 309 450 -243 229 280 0 0 chr20 46249619 46249669 -25904213 + MIR SINE MIR 81 130 -78 522 246 71 22 chr20 46250314 46250497 -25903385 - MIR SINE MIR -20 242 51 190 305 195 0 chr20 46250981 46251099 -25902783 + MIR SINE MIR 30 170 -92 308 348 0 9 chr20 46251169 46251284 -25902598 + MIR SINE MIR 36 149 -59 201 122 0 49 chr20 46252335 46252376 -25901506 + (TTA)n Simple_repeat Simple_repeat 2 40 0 397 281 69 44 chr20 46252411 46252614 -25901268 - MIR SINE MIR -20 242 35 1364 174 41 41 chr20 46252704 46252998 -25900884 + AluJo SINE Alu 1 294 -18 263 299 15 0 chr20 46254341 46254408 -25899474 + MER91 DNA MER1_type 2 69 -71 1996 130 125 78 chr20 46254482 46254523 -25899359 - MSTA LTR MaLR 0 428 390 1963 121 11 11 chr20 46254523 46254805 -25899077 + AluSx SINE Alu 1 282 -30 185 0 40 0 chr20 46254812 46254837 -25899045 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 1996 130 125 78 chr20 46254837 46255196 -25898686 - MSTA LTR MaLR -43 385 1 301 292 92 43 chr20 46255372 46255557 -25898325 + L2 LINE L2 2304 2497 -817 509 314 32 22 chr20 46255653 46255838 -25898044 + L2 LINE L2 2918 3104 -168 516 274 56 39 chr20 46255953 46256187 -25897695 - LTR16A1 LTR ERVL -4 453 216 474 264 19 65 chr20 46256915 46256977 -25896905 + MIR SINE MIR 90 153 -109 2181 97 3 7 chr20 46256977 46257267 -25896615 + AluSc SINE Alu 1 289 -20 474 264 19 65 chr20 46257267 46257359 -25896523 + MIR SINE MIR 153 237 -25 216 125 0 0 chr20 46258543 46258575 -25895307 - L2 LINE L2 -18 3295 3264 213 309 29 0 chr20 46258544 46258612 -25895270 - MIR SINE MIR -13 249 180 * 343 260 28 116 chr20 46258623 46258977 -25894905 - L1MC4 LINE L1 -1 8041 7719 4168 259 104 36 chr20 46259021 46260197 -25893685 - L1MC4a LINE L1 -410 7398 6064 3962 82 49 0 chr20 46260197 46260708 -25893174 + L1PA10 LINE L1 5630 6165 -3 4168 259 104 36 chr20 46260708 46261284 -25892598 - L1MC4a LINE L1 -1744 6064 5528 27 92 0 0 chr20 46261367 46261443 -25892439 + AT_rich Low_complexity Low_complexity 1 76 0 210 315 108 0 chr20 46261884 46261995 -25891887 - MIR SINE MIR -14 248 126 299 296 184 10 chr20 46262009 46262205 -25891677 + L2 LINE L2 3023 3252 -61 700 219 60 0 chr20 46262373 46262524 -25891358 - MER63 DNA MER1_type -276 786 1 229 290 65 0 chr20 46262767 46262860 -25891022 - MIR SINE MIR -56 206 108 228 135 0 0 chr20 46262860 46262897 -25890985 + (GGGGA)n Simple_repeat Simple_repeat 5 41 0 232 333 27 27 chr20 46263503 46263614 -25890268 + MIR SINE MIR 33 143 -65 2148 283 140 25 chr20 46263808 46264928 -25888954 + L2 LINE L2 822 2070 -1244 1153 205 7 96 chr20 46264929 46265106 -25888776 - AluJo SINE Alu -15 297 106 219 23 0 70 chr20 46265106 46265149 -25888733 + (TTTA)n Simple_repeat Simple_repeat 2 41 0 2253 88 3 0 chr20 46265149 46265433 -25888449 - AluSp SINE Alu -28 285 1 1153 205 7 96 chr20 46265433 46265556 -25888326 - AluJo SINE Alu -204 108 23 2032 148 35 40 chr20 46265580 46265957 -25887925 - THE1C LTR MaLR 0 375 1 853 228 32 11 chr20 46266019 46266208 -25887674 - MER58A DNA MER1_type -28 196 4 1128 272 10 3 chr20 46266211 46266501 -25887381 + L2 LINE L2 2163 2454 -860 404 140 0 0 chr20 46266563 46266620 -25887262 + AluS SINE Alu 2 58 -260 1065 173 6 0 chr20 46266620 46266788 -25887094 + AluJb SINE Alu 132 300 -12 1268 290 61 29 chr20 46266855 46267668 -25886214 + L2 LINE L2 2487 3313 0 815 253 50 0 chr20 46267940 46268138 -25885744 - MIR SINE MIR -21 241 34 278 247 26 0 chr20 46269110 46269187 -25884695 + L1M4 LINE L1 4487 4565 -1581 1715 273 134 32 chr20 46269456 46270971 -25882911 + L1ME3A LINE L1 3426 5094 -1052 801 236 17 0 chr20 46270986 46271160 -25882722 - LTR16C LTR ERVL -4 487 311 385 259 259 9 chr20 46271165 46271385 -25882497 + MER5C DNA MER1_type 1 275 -49 588 278 24 18 chr20 46271427 46271596 -25882286 - LTR16C LTR ERVL -202 289 120 693 297 120 33 chr20 46271823 46272402 -25881480 + L1ME3A LINE L1 5328 5951 -219 2052 126 0 82 chr20 46272480 46272821 -25881061 + AluSq SINE Alu 1 313 0 180 0 0 0 chr20 46272855 46272875 -25881007 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 870 326 119 41 chr20 46274111 46274197 -25879685 + L2 LINE L2 1566 1644 -1670 2332 102 0 0 chr20 46274197 46274490 -25879392 - AluSc SINE Alu -16 293 1 870 326 119 41 chr20 46274490 46275443 -25878439 + L2 LINE L2 1644 2686 -628 218 352 16 16 chr20 46275635 46275760 -25878122 + L2 LINE L2 3180 3304 -9 718 279 117 66 chr20 46276087 46276661 -25877221 + L1ME4a LINE L1 5485 6087 -34 465 340 56 15 chr20 46276762 46276959 -25876923 + MIR SINE MIR 7 211 -51 252 231 0 0 chr20 46277220 46277272 -25876610 - L2 LINE L2 0 3313 3262 1682 105 18 13 chr20 46277494 46277723 -25876159 - MER30 DNA MER1_type 0 230 1 1295 224 9 0 chr20 46277860 46278079 -25875803 + MER58A DNA MER1_type 4 224 0 309 251 64 82 chr20 46279045 46279211 -25874671 + MIR SINE MIR 17 183 -58 378 0 0 0 chr20 46279856 46279898 -25873984 + (CA)n Simple_repeat Simple_repeat 1 42 0 576 329 59 9 chr20 46280998 46281220 -25872662 + MIR SINE MIR 29 261 -1 197 284 78 71 chr20 46281193 46281334 -25872548 - MIR SINE MIR -86 176 35 * 373 219 0 0 chr20 46281346 46281419 -25872463 + MER5A DNA MER1_type 14 86 -103 586 294 63 58 chr20 46282212 46282574 -25871308 - L2 LINE L2 -285 2987 2623 470 278 181 0 chr20 46283074 46283218 -25870664 + MER5A DNA MER1_type 20 189 0 624 301 165 19 chr20 46284674 46285360 -25868522 + L2 LINE L2 2425 3218 -95 1212 189 19 80 chr20 46285364 46285677 -25868205 + MLT2D LTR ERVL 1 294 -120 2567 63 0 0 chr20 46285702 46286005 -25867877 + AluY SINE Alu 1 303 -8 292 278 0 0 chr20 46286041 46286113 -25867769 + L2 LINE L2 3242 3313 0 207 97 0 0 chr20 46286174 46286205 -25867677 + MER5B DNA MER1_type 6 36 -142 426 68 0 17 chr20 46286214 46286273 -25867609 + L1MC1 LINE L1 6271 6328 -5 2248 112 7 0 chr20 46286274 46286578 -25867304 + AluSc SINE Alu 1 306 -3 226 273 16 125 chr20 46286652 46286780 -25867102 + MER5B DNA MER1_type 59 172 -6 303 28 0 0 chr20 46288892 46288928 -25864954 + (CATA)n Simple_repeat Simple_repeat 2 37 0 238 338 0 0 chr20 46289118 46289192 -25864690 + MIR3 SINE MIR 114 187 -21 1221 287 116 14 chr20 46289592 46290837 -25863045 - L1ME3 LINE L1 -307 5855 4474 415 341 34 10 chr20 46290913 46291121 -25862761 + L2 LINE L2 2849 3061 -252 218 261 0 31 chr20 46291289 46291354 -25862528 + (CATATA)n Simple_repeat Simple_repeat 2 64 0 2043 152 0 9 chr20 46291426 46291799 -25862083 - AluSx SINE Alu 0 370 1 451 239 80 0 chr20 46292037 46292150 -25861732 + L2 LINE L2 3191 3312 -1 416 337 5 49 chr20 46292867 46293072 -25860810 - MER117 DNA MER1_type -1 196 1 1687 196 50 9 chr20 46293456 46293797 -25860085 - MER4D LTR ERV1 0 903 549 1321 167 123 0 chr20 46293829 46294081 -25859801 - MER49 LTR ERV1 -640 283 1 279 323 50 10 chr20 46295161 46295260 -25858622 + MIR SINE MIR 10 112 -150 317 240 0 5 chr20 46295464 46295535 -25858347 - L1MC/D LINE L1 -487 5634 5564 302 195 220 25 chr20 46296009 46296127 -25857755 + MER5A DNA MER1_type 37 177 -12 227 350 143 0 chr20 46297288 46297428 -25856454 - MIR SINE MIR -88 174 15 21 0 0 0 chr20 46298116 46298137 -25855745 + AT_rich Low_complexity Low_complexity 1 21 0 1868 164 32 51 chr20 46298310 46298379 -25855503 + MLT1A1 LTR MaLR 2 71 -294 2150 132 75 55 chr20 46298379 46298818 -25855064 - LTR7 LTR ERV1 -2 448 1 1868 164 32 51 chr20 46298818 46299119 -25854763 + MLT1A1 LTR MaLR 71 365 0 268 341 65 18 chr20 46299332 46299502 -25854380 + MER5B DNA MER1_type 1 178 0 4366 169 99 7 chr20 46299652 46300408 -25853474 - LTR1B LTR ERV1 0 826 1 1993 131 52 0 chr20 46300711 46301017 -25852865 - L1MA9 LINE L1 -5 6307 5986 665 165 16 0 chr20 46301019 46301140 -25852742 + L1MA9 LINE L1 5858 5980 -332 305 300 89 0 chr20 46301281 46301371 -25852511 + L2 LINE L2 3161 3258 -14 332 310 44 54 chr20 46302659 46302862 -25851020 - L1ME LINE L1 -303 5818 5618 6285 91 11 1 chr20 46303285 46304896 -25848986 - L1PA13 LINE L1 0 6163 4519 357 125 0 0 chr20 46305181 46305237 -25848645 + (TG)n Simple_repeat Simple_repeat 2 57 0 252 306 31 50 chr20 46305909 46306069 -25847813 + L1ME4a LINE L1 5965 6121 0 1599 209 41 41 chr20 46306326 46306742 -25847140 - MLT1C LTR MaLR -2 465 50 380 310 43 0 chr20 46307431 46307547 -25846335 - L2 LINE L2 -1 3312 3192 973 188 68 15 chr20 46308128 46308394 -25845488 - MER33 DNA MER1_type -2 322 43 228 289 149 0 chr20 46308405 46308519 -25845363 + MIR SINE MIR 120 250 -12 1112 197 10 10 chr20 46308519 46308755 -25845127 + AluJo SINE Alu 79 314 0 398 268 39 45 chr20 46309605 46309784 -25844098 - L1ME4a LINE L1 -200 5921 5744 1772 216 58 27 chr20 46310034 46310479 -25843403 - MLT1C LTR MaLR -8 459 1 333 214 20 189 chr20 46310799 46310967 -25842915 - MIR SINE MIR -8 254 140 1511 200 18 11 chr20 46310967 46311084 -25842798 + AluJo SINE Alu 1 116 -196 248 0 31 0 chr20 46311084 46311116 -25842766 + (CAAA)n Simple_repeat Simple_repeat 4 36 0 1511 200 18 11 chr20 46311116 46311283 -25842599 + AluJo SINE Alu 116 287 -25 333 214 20 189 chr20 46311283 46311362 -25842520 - MIR SINE MIR -122 140 49 399 307 130 50 chr20 46311419 46312291 -25841591 - L1ME4a LINE L1 -1314 4832 3892 1948 112 69 0 chr20 46312347 46312624 -25841258 + AluSx SINE Alu 1 296 -16 221 290 32 32 chr20 46312679 46312772 -25841110 - L2 LINE L2 -252 3061 2969 384 311 77 19 chr20 46312791 46313051 -25840831 - L1ME4a LINE L1 -2244 3902 3628 3349 233 86 12 chr20 46313438 46314612 -25839270 - L1ME1 LINE L1 -21 6145 4887 735 250 22 9 chr20 46314703 46314931 -25838951 - L1ME4a LINE L1 -2705 3441 3211 1875 98 0 0 chr20 46314931 46315177 -25838705 - AluSq SINE Alu 0 313 68 1036 123 0 0 chr20 46315177 46315315 -25838567 - AluSq/x SINE Alu -174 139 2 2534 249 23 12 chr20 46315316 46316055 -25837827 - L1ME4a LINE L1 -2925 3221 2475 21 57 0 0 chr20 46316111 46316146 -25837736 + AT_rich Low_complexity Low_complexity 1 35 0 27 0 0 0 chr20 46316475 46316502 -25837380 + AT_rich Low_complexity Low_complexity 1 27 0 329 273 61 10 chr20 46316639 46316738 -25837144 - MER58A DNA MER1_type 0 125 22 2443 90 0 3 chr20 46316967 46317278 -25836604 - AluSg SINE Alu 0 310 1 1542 211 42 17 chr20 46317388 46317744 -25836138 + MLT1A1 LTR MaLR 1 365 0 531 299 69 52 chr20 46318259 46319031 -25834851 - L1ME1 LINE L1 -1442 4704 3920 358 327 13 26 chr20 46319046 46319202 -25834680 - MLT1K LTR MaLR -3 585 432 454 310 42 33 chr20 46319368 46319581 -25834301 - MLT1K LTR MaLR -369 219 5 754 293 182 48 chr20 46319590 46320577 -25833305 - L1ME1 LINE L1 -2238 3908 2789 6187 43 0 0 chr20 46320588 46321286 -25832596 + L1PA5 LINE L1 5457 6154 0 26 30 0 0 chr20 46321365 46321398 -25832484 + AT_rich Low_complexity Low_complexity 1 33 0 217 188 42 0 chr20 46321458 46321506 -25832376 + (TATATG)n Simple_repeat Simple_repeat 5 54 0 413 319 0 0 chr20 46321797 46321913 -25831969 - MIR3 SINE MIR -12 196 81 808 239 144 43 chr20 46322087 46322392 -25831490 - MLT1J2 LTR MaLR -114 336 1 361 291 61 26 chr20 46323112 46323342 -25830540 + L1ME4a LINE L1 5689 5926 -195 273 119 0 0 chr20 46323625 46323667 -25830215 + (CA)n Simple_repeat Simple_repeat 2 43 0 237 65 0 0 chr20 46323964 46323995 -25829887 + (T)n Simple_repeat Simple_repeat 1 31 0 277 218 39 13 chr20 46324135 46324213 -25829669 - MLT1K LTR MaLR 0 588 509 224 311 98 45 chr20 46324788 46324920 -25828962 - MIR SINE MIR -55 153 15 21 36 0 0 chr20 46325061 46325089 -25828793 + AT_rich Low_complexity Low_complexity 1 28 0 321 26 0 0 chr20 46325307 46325345 -25828537 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 219 384 79 44 chr20 46325753 46326120 -25827762 + L2 LINE L2 2853 3232 -40 297 271 28 76 chr20 46326854 46326998 -25826884 + MER5B DNA MER1_type 18 154 -24 924 313 67 49 chr20 46327219 46327730 -25826152 + MLT1H LTR MaLR 30 549 0 27 29 0 0 chr20 46327738 46327772 -25826110 + AT_rich Low_complexity Low_complexity 1 34 0 334 264 97 21 chr20 46327909 46328123 -25825759 - L1ME4a LINE L1 -213 5908 5665 320 351 61 0 chr20 46328399 46328564 -25825318 + MIR SINE MIR 65 239 -23 3887 132 36 11 chr20 46328567 46329182 -25824700 + L1PA16 LINE L1 5534 6163 -3 888 252 148 60 chr20 46329277 46329621 -25824261 - L2 LINE L2 -1 3312 2921 2080 116 17 3 chr20 46329621 46329913 -25823969 + AluSx SINE Alu 1 296 -16 888 252 148 60 chr20 46329913 46330000 -25823882 - L2 LINE L2 -392 2921 2843 * 4222 279 83 12 chr20 46329989 46331541 -25822341 - L2 LINE L2 -579 2735 1074 277 311 35 48 chr20 46331548 46331776 -25822106 - L1ME LINE L1 -260 5861 5637 583 306 70 22 chr20 46331794 46332023 -25821859 - MLT1L LTR MaLR -22 593 354 454 299 29 0 chr20 46332072 46332209 -25821673 - MLT1L LTR MaLR -349 266 126 23 0 0 0 chr20 46332413 46332436 -25821446 + AT_rich Low_complexity Low_complexity 1 23 0 1274 226 33 73 chr20 46333205 46333690 -25820192 + MER39 LTR ERV1 4 707 0 1121 217 9 9 chr20 46335654 46336023 -25817859 - MLT1F1 LTR MaLR -57 510 2 237 159 45 0 chr20 46336271 46336315 -25817567 - Alu SINE Alu -156 146 101 282 361 31 10 chr20 46336318 46336415 -25817467 - L2 LINE L2 -36 3236 3138 913 191 101 17 chr20 46336427 46336601 -25817281 - MSTD LTR MaLR 0 396 238 1694 171 10 19 chr20 46336601 46336911 -25816971 - AluJo SINE Alu -5 307 1 913 191 101 17 chr20 46336911 46337062 -25816820 - MSTD LTR MaLR -158 238 1 7943 40 0 0 chr20 46337191 46338291 -25815591 - L1PA5 LINE L1 -1 6153 5054 756 220 27 90 chr20 46338299 46338390 -25815492 - MER20 DNA MER1_type -4 215 120 2177 117 3 0 chr20 46338390 46338689 -25815193 + AluSg SINE Alu 1 300 -10 756 220 27 90 chr20 46338689 46338820 -25815062 - MER20 DNA MER1_type -99 120 7 248 299 102 66 chr20 46339469 46339595 -25814287 + MIR SINE MIR 12 147 -115 2045 102 0 0 chr20 46339595 46339860 -25814022 - AluSg1 SINE Alu -6 303 39 248 299 102 66 chr20 46339860 46339900 -25813982 + MIR SINE MIR 147 184 -78 2080 163 13 24 chr20 46340498 46340559 -25813323 - L1MB1 LINE L1 0 6168 6108 2376 103 55 9 chr20 46340559 46340907 -25812975 + THE1B LTR MaLR 1 364 0 2080 163 13 24 chr20 46340907 46341219 -25812663 - L1MB1 LINE L1 -60 6108 5799 2935 166 40 1 chr20 46341271 46342002 -25811880 + L1M3 LINE L1 5027 5786 -382 223 348 106 43 chr20 46342361 46342758 -25811124 - L3 LINE CR1 -119 1458 1037 357 331 21 28 chr20 46343404 46343546 -25810336 - MIR SINE MIR -120 142 2 184 374 24 12 chr20 46343975 46344058 -25809824 - L3 LINE CR1 -1086 491 408 313 309 11 11 chr20 46344753 46344847 -25809035 + CT-rich Low_complexity Low_complexity 4 97 0 1076 249 20 87 chr20 46344865 46345255 -25808627 - MLT1I LTR MaLR 0 409 46 2847 98 48 29 chr20 46345261 46345679 -25808203 + MSTA LTR MaLR 3 428 0 238 228 63 38 chr20 46345728 46345807 -25808075 - L2 LINE L2 -76 3196 3116 398 309 27 7 chr20 46347157 46347306 -25806576 - L2 LINE L2 -197 3075 2924 826 251 55 0 chr20 46347588 46347807 -25806075 - MIR SINE MIR -16 246 16 266 305 78 23 chr20 46347859 46347987 -25805895 - L2 LINE L2 -1 3271 3137 214 385 28 14 chr20 46348069 46348212 -25805670 - MIR3 SINE MIR -24 184 40 268 296 0 0 chr20 46348235 46348316 -25805566 - L2 LINE L2 -39 3233 3153 424 133 13 0 chr20 46348929 46349004 -25804878 + MER5A DNA MER1_type 30 105 -84 186 133 0 0 chr20 46350742 46350772 -25803110 + (TCTA)n Simple_repeat Simple_repeat 4 33 0 1069 241 62 34 chr20 46350809 46351162 -25802720 - MLT1A1 LTR MaLR -2 363 1 254 204 0 0 chr20 46351166 46351215 -25802667 + L2 LINE L2 3179 3227 -86 241 290 123 32 chr20 46351667 46351919 -25801963 - L1ME LINE L1 -579 5542 5268 394 337 30 6 chr20 46353231 46353400 -25800482 + MIR SINE MIR 76 248 -14 1497 222 83 3 chr20 46353505 46353843 -25800039 - MLT1A1 LTR MaLR 0 365 1 2166 141 0 3 chr20 46353894 46354199 -25799683 + AluSx SINE Alu 1 304 -8 334 293 80 40 chr20 46354846 46354996 -25798886 - L2 LINE L2 0 3313 3158 212 316 66 13 chr20 46355311 46355387 -25798495 + MER91C DNA MER1_type 26 105 -35 255 337 74 31 chr20 46355420 46355738 -25798144 - L2 LINE L2 -196 3076 2734 724 232 17 0 chr20 46355764 46355941 -25797941 - MIR SINE MIR -14 248 69 632 139 9 28 chr20 46357215 46357323 -25796559 + FLAM_A SINE Alu 1 106 -36 643 170 0 18 chr20 46357323 46357488 -25796394 + GA-rich Low_complexity Low_complexity 3 164 0 582 249 38 119 chr20 46358708 46359102 -25794780 + L2 LINE L2 2952 3313 0 235 135 19 82 chr20 46360616 46360677 -25793205 - MIR3 SINE MIR -46 162 105 1558 140 0 0 chr20 46360693 46360922 -25792960 - MER30 DNA MER1_type -1 229 1 321 197 16 0 chr20 46360930 46360991 -25792891 + MER106B DNA MER1_type 1 62 -997 269 227 101 42 chr20 46361081 46361200 -25792682 + MER106B DNA MER1_type 934 1059 0 1508 179 20 13 chr20 46361203 46361505 -25792377 + MER33 DNA MER1_type 19 322 -2 216 200 0 0 chr20 46361608 46361658 -25792224 + MIR SINE MIR 81 130 -132 706 266 35 4 chr20 46362611 46362840 -25791042 + MIR SINE MIR 16 251 -11 2379 88 3 3 chr20 46362869 46363177 -25790705 + AluSp SINE Alu 1 308 -5 279 0 0 0 chr20 46363177 46363208 -25790674 + (TA)n Simple_repeat Simple_repeat 2 32 0 260 181 66 86 chr20 46363329 46363349 -25790533 - L1MC2 LINE L1 0 7981 7962 2246 114 7 0 chr20 46363349 46363655 -25790227 - AluSx SINE Alu -4 308 1 260 181 66 86 chr20 46363655 46364180 -25789702 - L1MC2 LINE L1 -19 7962 6208 1217 157 0 34 chr20 46364180 46364415 -25789467 - AluJo SINE Alu 0 312 86 258 196 0 0 chr20 46364416 46364467 -25789415 - L1MC4a LINE L1 -481 7327 7277 2261 241 51 11 chr20 46364574 46365139 -25788743 - MLT1G LTR MaLR 0 590 3 886 215 11 0 chr20 46367276 46367462 -25786420 - MER5A DNA MER1_type -1 188 1 206 359 0 0 chr20 46367582 46367646 -25786236 + MER91A DNA MER1_type 1 64 -132 205 283 50 0 chr20 46367768 46367828 -25786054 + MER91A DNA MER1_type 128 190 0 203 263 0 18 chr20 46368085 46368142 -25785740 + L2 LINE L2 3246 3301 -12 1146 186 92 38 chr20 46368207 46368524 -25785358 - L1MD3 LINE L1 -1 7994 7661 1776 154 3 20 chr20 46368529 46368847 -25785035 - AluJo SINE Alu 0 312 6 220 241 37 0 chr20 46368986 46369040 -25784842 - MIR SINE MIR -131 131 76 180 220 0 40 chr20 46369077 46369127 -25784755 - L2 LINE L2 -76 3237 3190 942 253 18 5 chr20 46369128 46369349 -25784533 - MER58A DNA MER1_type 0 224 1 2103 119 0 3 chr20 46369780 46370066 -25783816 - AluSp SINE Alu -28 285 1 568 274 199 43 chr20 46371053 46371400 -25782482 - LTR16C LTR ERVL -3 488 88 936 223 103 50 chr20 46372096 46372406 -25781476 + L1ME3A LINE L1 5833 6162 -8 1656 173 10 33 chr20 46372406 46372712 -25781170 - AluJo SINE Alu -13 299 1 376 254 53 9 chr20 46372798 46372912 -25780970 + MER5C DNA MER1_type 3 121 -203 188 128 26 51 chr20 46373208 46373247 -25780635 - MER5A DNA MER1_type -97 92 55 1154 214 35 39 chr20 46373280 46373599 -25780283 + MER33 DNA MER1_type 1 310 -14 2225 134 39 16 chr20 46373601 46373988 -25779894 - L1MA2 LINE L1 0 6304 5909 306 0 0 0 chr20 46374759 46374793 -25779089 + (TGAA)n Simple_repeat Simple_repeat 4 37 0 257 298 73 26 chr20 46375042 46375334 -25778548 - L1MC/D LINE L1 -520 5824 5522 1333 191 0 24 chr20 46376010 46376262 -25777620 + AluJb SINE Alu 67 312 0 346 305 56 51 chr20 46376853 46377050 -25776832 - L2 LINE L2 0 3272 3075 312 369 21 7 chr20 46377879 46378020 -25775862 - MIR SINE MIR -116 146 4 315 0 0 0 chr20 46378073 46378108 -25775774 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 421 279 18 0 chr20 46378407 46378518 -25775364 - L2 LINE L2 -6 3266 3154 1208 223 113 22 chr20 46378599 46378979 -25774903 - LTR45B LTR ERV1 0 525 75 228 335 35 46 chr20 46379260 46379472 -25774410 - MIR SINE MIR -55 207 3 285 355 38 43 chr20 46380429 46380640 -25773242 + L2 LINE L2 2652 2861 -453 345 100 0 0 chr20 46380846 46380896 -25772986 + (CA)n Simple_repeat Simple_repeat 1 50 0 251 220 0 24 chr20 46380896 46381064 -25772818 + (TA)n Simple_repeat Simple_repeat 1 164 0 243 0 0 0 chr20 46381085 46381112 -25772770 + (TG)n Simple_repeat Simple_repeat 2 28 0 925 234 15 0 chr20 46381146 46381343 -25772539 + MER3 DNA MER1_type 2 201 -8 385 298 72 14 chr20 46381468 46381676 -25772206 - L2 LINE L2 -211 3061 2842 223 314 108 0 chr20 46382147 46382249 -25771633 + MIR SINE MIR 98 210 -52 1986 155 0 0 chr20 46382279 46382576 -25771306 + AluSx SINE Alu 1 297 -15 190 323 0 11 chr20 46383081 46383174 -25770708 - L2 LINE L2 -818 2496 2405 497 239 128 18 chr20 46384760 46384978 -25768904 - L2 LINE L2 -1035 2279 2038 1005 174 68 32 chr20 46386229 46386419 -25767463 - MER3 DNA MER1_type -1 208 12 387 258 170 6 chr20 46386713 46386872 -25767010 - MER5A DNA MER1_type -4 185 1 754 260 17 6 chr20 46388703 46388884 -25764998 + MER5A DNA MER1_type 1 183 -6 424 274 156 23 chr20 46389971 46390278 -25763604 - HAL1 LINE L1 -11 2496 2149 25 65 0 0 chr20 46390344 46390390 -25763492 + AT_rich Low_complexity Low_complexity 1 46 0 846 262 19 0 chr20 46390401 46390611 -25763271 - MIR SINE MIR -46 216 3 473 262 82 56 chr20 46390844 46391149 -25762733 - HAL1 LINE L1 -1408 1099 787 252 331 81 62 chr20 46391245 46391614 -25762268 - HAL1 LINE L1 -2130 377 2 185 311 144 30 chr20 46391618 46391785 -25762097 - MIR SINE MIR -57 205 20 256 346 32 25 chr20 46391804 46392084 -25761798 - L1ME LINE L1 -512 5609 5328 1133 173 32 36 chr20 46392100 46392320 -25761562 + MER20 DNA MER1_type 1 219 0 5538 200 51 42 chr20 46392370 46392498 -25761384 - Charlie1a DNA MER1_type -1310 1451 1326 1981 141 0 7 chr20 46392498 46392789 -25761093 + AluSx SINE Alu 1 289 -23 5538 200 51 42 chr20 46392789 46392847 -25761035 - Charlie1a DNA MER1_type -1435 1326 1270 2261 94 0 7 chr20 46392847 46393135 -25760747 + AluSc SINE Alu 1 286 -23 5538 200 51 42 chr20 46393135 46393969 -25759913 - Charlie1a DNA MER1_type -1491 1270 411 2367 90 0 3 chr20 46393969 46394268 -25759614 + AluY SINE Alu 1 298 -13 5538 200 51 42 chr20 46394268 46394655 -25759227 - Charlie1a DNA MER1_type -2350 411 29 23 0 0 0 chr20 46395036 46395059 -25758823 + AT_rich Low_complexity Low_complexity 1 23 0 411 211 11 42 chr20 46395554 46395649 -25758233 - MER5A DNA MER1_type -83 106 15 544 141 0 0 chr20 46395753 46395838 -25758044 - FRAM SINE Alu -17 159 75 258 217 0 0 chr20 46395842 46395888 -25757994 - AluJ/monomer SINE Alu -256 46 1 2076 136 0 16 chr20 46395980 46396290 -25757592 - AluSx SINE Alu -7 305 1 23 0 0 0 chr20 46396541 46396564 -25757318 + AT_rich Low_complexity Low_complexity 1 23 0 447 19 0 0 chr20 46396953 46397005 -25756877 + (TG)n Simple_repeat Simple_repeat 1 52 0 462 332 90 28 chr20 46397008 46397330 -25756552 - L1ME LINE L1 -1315 4831 4490 243 311 56 54 chr20 46397591 46398018 -25755864 - L1ME LINE L1 -1922 4224 3797 22 0 0 0 chr20 46398564 46398586 -25755296 + AT_rich Low_complexity Low_complexity 1 22 0 910 246 52 29 chr20 46398770 46399156 -25754726 - L1MC4 LINE L1 -16 8026 7632 294 29 0 0 chr20 46399363 46399398 -25754484 + (CA)n Simple_repeat Simple_repeat 1 35 0 222 217 58 43 chr20 46399745 46399814 -25754068 - L2 LINE L2 0 3272 3203 238 206 93 47 chr20 46399991 46400098 -25753784 - L1 LINE L1 -1854 4292 4181 1751 265 88 13 chr20 46400373 46401011 -25752871 - L2 LINE L2 -160 3153 2458 2826 216 35 16 chr20 46401940 46402679 -25751203 - L1MB7 LINE L1 -9 6175 5423 189 25 25 50 chr20 46402680 46402720 -25751162 + (TTTTA)n Simple_repeat Simple_repeat 4 42 0 7536 27 1 0 chr20 46402722 46404368 -25749514 - L1PA3 LINE L1 -18 6137 4492 2048 76 47 7 chr20 46404400 46404677 -25749205 - AluYa5 SINE Alu -23 288 1 368 305 81 35 chr20 46404681 46404878 -25749004 - L2 LINE L2 0 3313 3108 754 247 11 34 chr20 46405065 46405243 -25748639 - MER5B DNA MER1_type -4 174 1 913 228 114 25 chr20 46405560 46405920 -25747962 + LTR16A1 LTR ERVL 66 457 0 244 295 162 9 chr20 46407215 46407320 -25746562 + MIR SINE MIR 19 139 -69 430 316 104 71 chr20 46409377 46410312 -25743570 - L2 LINE L2 -1 3271 2304 806 250 51 14 chr20 46410838 46411054 -25742828 + MER58A DNA MER1_type 1 224 0 215 238 175 0 chr20 46411080 46411143 -25742739 + MIR SINE MIR 90 163 -99 1083 8 0 0 chr20 46411265 46411386 -25742496 - AluYb8 SINE Alu -1 317 197 448 328 58 63 chr20 46411439 46411820 -25742062 - L3 LINE CR1 -1 1576 1198 2431 77 7 3 chr20 46411922 46412232 -25741650 - AluY SINE Alu 0 311 1 4035 91 7 0 chr20 46413040 46413590 -25740292 - MER41A LTR ERV1 0 554 1 198 0 0 0 chr20 46413654 46413676 -25740206 + (A)n Simple_repeat Simple_repeat 1 22 0 420 309 92 18 chr20 46414072 46414409 -25739473 + HAL1b LINE L1 414 775 -573 263 315 135 0 chr20 46415101 46415190 -25738692 + MIR SINE MIR 7 107 -155 524 294 53 29 chr20 46415207 46415377 -25738505 - L2 LINE L2 -4 3309 3136 671 336 75 44 chr20 46415779 46416282 -25737600 - L3 LINE CR1 -1 1576 1058 491 322 72 70 chr20 46416340 46416756 -25737126 + L2 LINE L2 2896 3312 -1 264 234 65 13 chr20 46416785 46416862 -25737020 + MIR SINE MIR 112 192 -70 255 269 87 29 chr20 46417704 46417808 -25736074 + MIR SINE MIR 4 113 -149 4047 117 26 5 chr20 46418146 46418768 -25735114 - MER41B LTR ERV1 0 635 1 459 324 115 11 chr20 46419095 46419382 -25734500 - MLT1I LTR MaLR -92 317 1 252 349 59 18 chr20 46420610 46420781 -25733101 + MIR SINE MIR 16 190 -62 282 116 0 0 chr20 46420836 46420879 -25733003 + (CA)n Simple_repeat Simple_repeat 2 44 0 625 86 9 35 chr20 46420888 46421004 -25732878 + Charlie5 DNA MER1_type 2234 2346 -266 282 300 0 0 chr20 46421008 46421088 -25732794 + (TA)n Simple_repeat Simple_repeat 2 81 0 2143 142 7 0 chr20 46421098 46421408 -25732474 - AluSx SINE Alu 0 312 1 574 325 27 5 chr20 46421910 46422098 -25731784 + MIR SINE MIR 68 259 -3 454 345 10 10 chr20 46422620 46422823 -25731059 + L2 LINE L2 2482 2684 -630 211 308 77 31 chr20 46422815 46422945 -25730937 - MIR SINE MIR -82 180 45 * 405 261 158 42 chr20 46423498 46423663 -25730219 - MIR3 SINE MIR -8 200 17 419 328 83 79 chr20 46423736 46424207 -25729675 - L2 LINE L2 -11 3261 2765 247 271 14 14 chr20 46424354 46424424 -25729458 - MIR SINE MIR -111 151 82 316 242 57 32 chr20 46424518 46424642 -25729240 - L1MC5 LINE L1 -47 7914 7788 2622 252 102 81 chr20 46424664 46425685 -25728197 - L1MC4 LINE L1 -2 8434 7435 284 0 0 27 chr20 46425685 46425722 -25728160 + (TAA)n Simple_repeat Simple_repeat 3 38 0 2622 252 102 81 chr20 46425722 46426198 -25727684 - L1MC4 LINE L1 -1001 7435 6970 2435 92 3 0 chr20 46426198 46426503 -25727379 - AluSq SINE Alu -7 306 1 2622 252 102 81 chr20 46426503 46426532 -25727350 - L1MC4 LINE L1 -1466 6970 6943 2337 88 0 10 chr20 46426532 46426837 -25727045 + AluSc SINE Alu 1 302 -7 2622 252 102 81 chr20 46426837 46427532 -25726350 - L1MC4 LINE L1 -1493 6943 6264 2082 106 0 3 chr20 46427532 46427837 -25726045 - AluSc SINE Alu 0 305 2 2622 252 102 81 chr20 46427837 46429181 -25724701 - L1MC4 LINE L1 -2172 6264 4779 305 297 68 47 chr20 46429255 46429447 -25724435 - L1MC4 LINE L1 -3679 2861 2666 1264 63 19 63 chr20 46429497 46429702 -25724180 - L1MA1 LINE L1 -5 6297 6102 306 294 113 22 chr20 46429730 46429961 -25723921 - L1MC4 LINE L1 -3891 2649 2398 2170 129 0 0 chr20 46430018 46430313 -25723569 - AluSg SINE Alu -15 295 1 2152 131 50 8 chr20 46430407 46430767 -25723115 - THE1C LTR MaLR 0 375 1 391 326 93 25 chr20 46430815 46431548 -25722334 - HAL1b LINE L1 -501 847 65 21 36 0 0 chr20 46431872 46431900 -25721982 + AT_rich Low_complexity Low_complexity 1 28 0 987 340 92 13 chr20 46432587 46433284 -25720598 - L2 LINE L2 -791 2523 1772 212 240 200 10 chr20 46433906 46434006 -25719876 + MIR SINE MIR 73 191 -71 707 125 0 90 chr20 46434028 46434172 -25719710 + AluSp/q SINE Alu 183 313 0 426 362 82 31 chr20 46434437 46434849 -25719033 + L2 LINE L2 2567 2999 -273 556 302 43 0 chr20 46435112 46435251 -25718631 + L2 LINE L2 3118 3262 -10 243 0 0 0 chr20 46435808 46435835 -25718047 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 246 275 0 14 chr20 46435989 46436058 -25717824 - MIR3 SINE MIR -49 159 92 2363 161 31 19 chr20 46436788 46437520 -25716362 - L1PA16 LINE L1 -604 5562 4823 * 3486 146 0 13 chr20 46437511 46438137 -25715745 + L1PA16 LINE L1 5554 6171 0 581 267 26 11 chr20 46438190 46438381 -25715501 + L1ME3A LINE L1 5963 6156 -14 305 320 0 0 chr20 46438470 46438592 -25715290 - L1ME4a LINE L1 -227 5894 5773 5795 142 23 32 chr20 46438605 46440827 -25713055 - L1MA5A LINE L1 0 6297 4105 240 316 0 0 chr20 46440882 46440977 -25712905 - L1ME4a LINE L1 -393 5728 5634 229 257 148 30 chr20 46441731 46441832 -25712050 + L3 LINE CR1 342 454 -1123 357 343 185 35 chr20 46441890 46442640 -25711242 + L3 LINE CR1 562 1424 -153 526 321 30 46 chr20 46442654 46443025 -25710857 + MLT1I LTR MaLR 40 404 -5 25 0 0 0 chr20 46443822 46443847 -25710035 + AT_rich Low_complexity Low_complexity 1 25 0 180 111 0 0 chr20 46444201 46444228 -25709654 + (TGGA)n Simple_repeat Simple_repeat 1 27 0 1664 179 3 3 chr20 46446886 46447193 -25706689 - MLT1C LTR MaLR -2 465 159 337 335 71 52 chr20 46448000 46448344 -25705538 + L2 LINE L2 2804 3161 -152 549 0 0 0 chr20 46448344 46448405 -25705477 + (TA)n Simple_repeat Simple_repeat 1 61 0 337 335 71 52 chr20 46448405 46448522 -25705360 + L2 LINE L2 3161 3274 -39 468 91 0 0 chr20 46448536 46448602 -25705280 + (TGGA)n Simple_repeat Simple_repeat 1 66 0 274 294 50 31 chr20 46448732 46448892 -25704990 - L3 LINE CR1 -92 1485 1323 214 226 38 0 chr20 46449575 46449628 -25704254 - MIR SINE MIR -61 147 93 224 261 22 76 chr20 46449754 46449846 -25704036 + MIR SINE MIR 20 106 -102 567 0 0 0 chr20 46449919 46449982 -25703900 + (TA)n Simple_repeat Simple_repeat 2 64 0 504 0 0 0 chr20 46451886 46451942 -25701940 + (CA)n Simple_repeat Simple_repeat 2 57 0 403 245 60 33 chr20 46452053 46452365 -25701517 - MLT1I LTR MaLR 0 409 21 337 288 81 0 chr20 46452639 46452750 -25701132 - MIR SINE MIR -72 190 71 2244 112 3 0 chr20 46452964 46453259 -25700623 + AluSp SINE Alu 1 296 -17 274 367 0 0 chr20 46453261 46453370 -25700512 + MIR SINE MIR 148 256 -6 288 130 0 0 chr20 46453727 46453773 -25700109 + (TG)n Simple_repeat Simple_repeat 1 46 0 1818 172 9 29 chr20 46454095 46454443 -25699439 - MER58B DNA MER1_type 0 341 1 223 293 94 28 chr20 46454757 46454863 -25699019 + MIR SINE MIR 20 132 -130 520 355 47 41 chr20 46454869 46455334 -25698548 - L2 LINE L2 -1 3271 2804 477 370 53 3 chr20 46455414 46455736 -25698146 - L2 LINE L2 -639 2675 2338 243 369 27 0 chr20 46455723 46455834 -25698048 + MIR SINE MIR 149 262 0 * 315 179 0 0 chr20 46456182 46456249 -25697633 + (CCCA)n Simple_repeat Simple_repeat 1 67 0 381 226 17 52 chr20 46456289 46456404 -25697478 - L2 LINE L2 0 3272 3162 1335 240 76 28 chr20 46457226 46457660 -25696222 - LTR16A1 LTR ERVL 0 457 3 256 334 32 23 chr20 46458437 46458613 -25695269 + MIR SINE MIR 16 190 -67 956 197 14 49 chr20 46458711 46458934 -25694948 - MER20 DNA MER1_type 0 219 5 536 190 16 0 chr20 46458946 46459067 -25694815 - MER33 DNA MER1_type -5 358 236 2173 171 0 21 chr20 46459067 46459441 -25694441 - MER47A DNA MER2_type 0 366 1 516 160 59 155 chr20 46459442 46459661 -25694221 - MER33 DNA MER1_type -126 198 1 488 189 21 0 chr20 46459778 46459873 -25694009 + MER20 DNA MER1_type 33 129 -90 226 211 14 99 chr20 46460263 46460334 -25693548 + MIR SINE MIR 79 143 -119 527 274 99 14 chr20 46461009 46461221 -25692661 - MIR SINE MIR -25 237 8 247 111 0 0 chr20 46461462 46461498 -25692384 - MIR SINE MIR -63 145 110 371 351 76 23 chr20 46462384 46462646 -25691236 + L2 LINE L2 2437 2712 -602 1383 171 53 50 chr20 46462654 46462800 -25691082 + AluJo SINE Alu 1 145 -160 2420 94 0 0 chr20 46462800 46463107 -25690775 + AluSg SINE Alu 1 307 -3 1383 171 53 50 chr20 46463107 46463264 -25690618 + AluJo SINE Alu 145 305 0 1700 213 56 20 chr20 46464996 46465442 -25688440 + MLT1C LTR MaLR 3 464 -3 499 273 99 37 chr20 46468456 46468608 -25685274 + MIR SINE MIR 1 175 -87 2456 114 60 48 chr20 46468608 46469028 -25684854 - MSTA LTR MaLR 0 428 4 499 273 99 37 chr20 46469028 46469117 -25684765 + MIR SINE MIR 175 257 -5 259 216 112 112 chr20 46469395 46469529 -25684353 + LTR33 LTR ERVL 43 176 -345 410 233 159 23 chr20 46469648 46469824 -25684058 + LTR33A LTR ERVL 321 520 -3 230 375 40 55 chr20 46469892 46470145 -25683737 - L3 LINE CR1 -1297 280 32 205 287 62 47 chr20 46471136 46471265 -25682617 - MIR SINE MIR -64 198 68 419 337 22 0 chr20 46471822 46472000 -25681882 - L3 LINE CR1 -202 1375 1194 397 250 153 0 chr20 46472045 46472197 -25681685 - MER5A DNA MER1_type -7 182 4 226 315 22 0 chr20 46472225 46472317 -25681565 - L3 LINE CR1 -468 1109 1016 1210 340 81 31 chr20 46473869 46474815 -25679067 + L2 LINE L2 1961 2954 -360 408 270 113 0 chr20 46475031 46475146 -25678736 + L2 LINE L2 3144 3271 -1 186 259 69 35 chr20 46475213 46475271 -25678611 + L2 LINE L2 3193 3252 -20 312 314 58 7 chr20 46476191 46476328 -25677554 - L2 LINE L2 -13 3259 3116 336 300 115 45 chr20 46476801 46477001 -25676881 + MIR SINE MIR 34 247 -15 547 216 12 48 chr20 46477407 46477574 -25676308 + MIR SINE MIR 88 248 -14 207 324 117 0 chr20 46482289 46482400 -25671482 + MIR SINE MIR 74 197 -65 402 176 0 0 chr20 46483354 46483439 -25670443 + CT-rich Low_complexity Low_complexity 2 86 0 247 313 114 23 chr20 46483461 46483637 -25670245 + L2 LINE L2 2563 2754 -560 207 0 0 0 chr20 46484349 46484372 -25669510 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 396 326 0 16 chr20 46484439 46484568 -25669314 - MIR SINE MIR -125 137 11 855 263 36 5 chr20 46485318 46485542 -25668340 + MIR SINE MIR 1 231 -31 514 149 8 8 chr20 46485712 46485833 -25668049 + (TGGA)n Simple_repeat Simple_repeat 3 123 0 198 0 0 0 chr20 46486008 46486030 -25667852 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 199 284 54 0 chr20 46486579 46486653 -25667229 + MIR SINE MIR 119 196 -66 2639 61 0 6 chr20 46486757 46487069 -25666813 + AluY SINE Alu 1 310 -1 641 239 54 5 chr20 46487110 46487294 -25666588 + MIR SINE MIR 70 262 0 332 289 0 10 chr20 46487559 46487656 -25666226 - MIR SINE MIR -109 153 58 389 302 0 47 chr20 46487702 46487851 -25666031 - MIR3 SINE MIR -44 164 23 246 383 0 9 chr20 46488260 46488375 -25665507 + MIR SINE MIR 34 147 -61 773 247 21 47 chr20 46489202 46489392 -25664490 - MLT1G1 LTR MaLR -4 591 407 602 229 35 57 chr20 46489434 46489681 -25664201 - MLT1F LTR MaLR -287 268 6 182 336 17 43 chr20 46489889 46490005 -25663877 + L3 LINE CR1 1339 1451 -126 2176 96 14 0 chr20 46490920 46491240 -25662642 + AluSq SINE Alu 1 324 0 185 274 0 0 chr20 46491993 46492044 -25661838 - L2 LINE L2 -317 2955 2905 526 320 74 9 chr20 46492051 46492282 -25661600 + MIR SINE MIR 11 256 -6 319 319 59 0 chr20 46492964 46493099 -25660783 - MIR SINE MIR -55 207 65 207 0 0 0 chr20 46493642 46493665 -25660217 + (T)n Simple_repeat Simple_repeat 1 23 0 537 188 208 0 chr20 46493979 46494128 -25659754 + MER5A DNA MER1_type 10 189 0 226 216 59 0 chr20 46494139 46494190 -25659692 + MIR SINE MIR 117 170 -92 539 248 51 47 chr20 46494295 46494529 -25659353 - L2 LINE L2 -1 3312 3078 903 251 32 9 chr20 46494607 46494826 -25659056 - MER58A DNA MER1_type 0 224 1 184 385 0 0 chr20 46494877 46494942 -25658940 - L2 LINE L2 -21 3251 3187 316 297 109 7 chr20 46495770 46495908 -25657974 + MIR SINE MIR 111 262 0 293 286 117 26 chr20 46496707 46496861 -25657021 + MIR SINE MIR 81 248 -14 237 350 36 22 chr20 46497193 46497330 -25656552 + MER5A DNA MER1_type 50 188 -1 203 272 70 53 chr20 46497623 46497737 -25656145 + L2 LINE L2 3156 3271 -1 419 103 0 175 chr20 46498248 46498345 -25655537 + MADE1 DNA Mariner 1 80 0 2416 97 3 3 chr20 46498570 46498878 -25655004 + AluSq SINE Alu 1 308 -5 304 246 8 51 chr20 46499150 46499268 -25654614 + LTR16A LTR ERVL 245 357 -93 196 146 21 21 chr20 46499271 46499319 -25654563 + CT-rich Low_complexity Low_complexity 4 51 0 266 318 26 45 chr20 46500109 46500263 -25653619 + MIR SINE MIR 73 223 -39 1863 162 0 7 chr20 46500526 46500828 -25653054 + AluSx SINE Alu 1 300 -12 375 260 191 6 chr20 46500971 46501129 -25652753 + MIR SINE MIR 19 204 -58 202 56 56 0 chr20 46501202 46501238 -25652644 + GA-rich Low_complexity Low_complexity 1 38 0 401 193 96 0 chr20 46501776 46501859 -25652023 - MER5B DNA MER1_type -85 93 3 432 244 160 88 chr20 46503036 46503274 -25650608 + MIR SINE MIR 8 262 0 2973 152 55 41 chr20 46503354 46503895 -25649987 - MER21A LTR ERV1 -7 924 376 1291 156 43 16 chr20 46503900 46504157 -25649725 - MER21A LTR ERV1 -667 264 1 1926 148 48 58 chr20 46504483 46504660 -25649222 + THE1C LTR MaLR 1 178 -197 1968 143 28 0 chr20 46504660 46504947 -25648935 + AluSx SINE Alu 1 295 -17 1926 148 48 58 chr20 46504947 46505148 -25648734 + THE1C LTR MaLR 178 375 0 2215 121 0 13 chr20 46505175 46505489 -25648393 + AluSx SINE Alu 1 310 -2 835 149 37 0 chr20 46505914 46506048 -25647834 - FLAM_C SINE Alu -3 140 2 1041 272 10 0 chr20 46506129 46506423 -25647459 - L1M4 LINE L1 -1543 4603 4307 24 32 0 0 chr20 46506423 46506454 -25647428 + AT_rich Low_complexity Low_complexity 1 31 0 431 300 176 9 chr20 46506672 46506882 -25647000 + MIR SINE MIR 15 259 -3 299 291 45 9 chr20 46506906 46507016 -25646866 + L3 LINE CR1 1338 1451 -126 647 233 5 68 chr20 46508180 46508399 -25645483 - L1ME4a LINE L1 -200 5921 5717 343 358 154 0 chr20 46508428 46508629 -25645253 + MIR SINE MIR 21 252 -10 918 200 5 82 chr20 46508663 46508883 -25644999 + MER20 DNA MER1_type 17 219 0 257 136 17 51 chr20 46508937 46508996 -25644886 - L1ME LINE L1 -453 5668 5612 456 19 0 0 chr20 46509053 46509106 -25644776 + (TG)n Simple_repeat Simple_repeat 2 54 0 2013 105 4 7 chr20 46509110 46509387 -25644495 - AluSx SINE Alu -36 276 1 598 217 186 12 chr20 46509478 46509639 -25644243 + MER5A DNA MER1_type 1 189 0 241 236 18 18 chr20 46509998 46510053 -25643829 - L2 LINE L2 -215 3057 3003 351 354 39 0 chr20 46510074 46510204 -25643678 - L2 LINE L2 -5 3267 3133 259 294 105 20 chr20 46510620 46510773 -25643109 + L3 LINE CR1 1410 1575 -2 311 305 117 49 chr20 46511017 46511240 -25642642 - MIR SINE MIR 0 262 25 700 279 25 33 chr20 46511396 46511636 -25642246 - MIR SINE MIR -5 257 20 228 111 0 0 chr20 46511947 46511983 -25641899 + (CTG)n Simple_repeat Simple_repeat 1 36 0 707 288 25 21 chr20 46512286 46512522 -25641360 + MIR SINE MIR 21 257 -5 1689 212 56 50 chr20 46512557 46513019 -25640863 - MLT1C LTR MaLR -2 465 1 250 379 52 0 chr20 46513060 46513176 -25640706 - MIR SINE MIR -55 153 32 820 182 123 12 chr20 46513239 46513409 -25640473 - MER5A DNA MER1_type 0 189 1 722 209 144 0 chr20 46513417 46513570 -25640312 + MER5B DNA MER1_type 1 175 -3 784 276 20 16 chr20 46513713 46513963 -25639919 - MIR SINE MIR -10 252 2 195 42 0 0 chr20 46514038 46514062 -25639820 + (T)n Simple_repeat Simple_repeat 1 24 0 43568 35 21 4 chr20 46514161 46520209 -25633673 - L1PA2 LINE L1 0 6155 1 209 299 45 0 chr20 46520456 46520523 -25633359 + MIR SINE MIR 81 150 -58 316 289 21 10 chr20 46520928 46521025 -25632857 - L3 LINE CR1 -62 1515 1418 823 20 0 0 chr20 46521320 46521419 -25632463 - L1PA4 LINE L1 -74 6081 5983 729 44 0 0 chr20 46521419 46521504 -25632378 + L1PA5 LINE L1 6064 6154 0 309 301 172 31 chr20 46521504 46521760 -25632122 - L3 LINE CR1 -218 1359 1068 197 306 153 0 chr20 46522460 46522571 -25631311 - L2 LINE L2 -4 3309 3182 252 304 17 43 chr20 46522857 46522972 -25630910 - L2 LINE L2 -189 3083 2972 1715 171 4 4 chr20 46524209 46524489 -25629393 + AluSx SINE Alu 1 280 -32 315 71 0 0 chr20 46524489 46524531 -25629351 + (CA)n Simple_repeat Simple_repeat 1 42 0 575 292 86 73 chr20 46524561 46525024 -25628858 + LTR33 LTR ERVL 27 495 -26 185 0 40 0 chr20 46525157 46525182 -25628700 + (TTTG)n Simple_repeat Simple_repeat 1 26 0 1611 134 65 8 chr20 46525185 46525446 -25628436 - AluJb SINE Alu -36 276 1 246 344 33 25 chr20 46525461 46525583 -25628299 - L3 LINE CR1 -111 1466 1344 409 326 124 16 chr20 46525768 46526026 -25627856 + L3 LINE CR1 1230 1515 -62 639 286 36 27 chr20 46526085 46526309 -25627573 - MIR SINE MIR -21 241 16 262 308 173 8 chr20 46526320 46526396 -25627486 + MER5A DNA MER1_type 35 97 -92 189 0 0 0 chr20 46526396 46526417 -25627465 + (TG)n Simple_repeat Simple_repeat 2 22 0 262 308 173 8 chr20 46526417 46526473 -25627409 + MER5A DNA MER1_type 97 189 0 242 276 55 87 chr20 46527620 46527747 -25626135 - MIR SINE MIR -90 172 50 275 336 14 42 chr20 46528202 46528345 -25625537 - MIR SINE MIR -78 184 46 275 302 16 88 chr20 46528348 46528530 -25625352 + MER5B DNA MER1_type 4 172 -6 1580 245 43 77 chr20 46528591 46529077 -25624805 - L1MC4 LINE L1 -10 8032 7576 2435 72 7 0 chr20 46529077 46529381 -25624501 - AluY SINE Alu -5 306 1 1580 245 43 77 chr20 46529381 46529596 -25624286 - L1MC4 LINE L1 -466 7576 7355 1515 109 65 0 chr20 46529888 46530135 -25623747 + L1MA5 LINE L1 6036 6298 -2 240 353 8 0 chr20 46530642 46530764 -25623118 + (TA)n Simple_repeat Simple_repeat 2 124 0 2190 54 4 0 chr20 46531310 46531570 -25622312 - L1PA4 LINE L1 0 6155 5895 355 209 99 43 chr20 46532404 46532560 -25621322 - MIR SINE MIR -63 145 4 526 283 76 31 chr20 46532772 46532995 -25620887 - MIR SINE MIR -10 252 20 388 358 25 39 chr20 46533200 46533404 -25620478 - MIR SINE MIR -33 229 29 260 341 48 0 chr20 46534321 46534447 -25619435 - MIR SINE MIR -11 251 120 247 291 131 76 chr20 46534747 46535341 -25618541 - L3 LINE CR1 -240 1337 711 437 311 27 59 chr20 46535406 46535628 -25618254 - MIR SINE MIR -20 242 28 268 258 15 15 chr20 46535667 46535733 -25618149 - MIR SINE MIR -108 154 89 996 150 19 0 chr20 46535733 46535893 -25617989 + MER5A DNA MER1_type 1 163 -26 180 347 16 41 chr20 46536395 46536516 -25617366 + L3 LINE CR1 637 754 -823 265 336 109 0 chr20 46536635 46536754 -25617128 - MIR3 SINE MIR -23 185 54 216 305 124 9 chr20 46536962 46537067 -25616815 - L2 LINE L2 -15 3298 3182 530 251 223 6 chr20 46537906 46538081 -25615801 - MIR SINE MIR -2 260 48 484 256 85 6 chr20 46538108 46538284 -25615598 + L2 LINE L2 1987 2176 -1138 282 307 40 20 chr20 46538320 46538470 -25615412 - L2 LINE L2 -924 2390 2238 339 268 0 2 chr20 46538515 46538603 -25615279 - MIR SINE MIR -75 133 46 854 315 54 39 chr20 46539539 46540021 -25613861 + L2 LINE L2 2463 2951 -363 1100 211 15 10 chr20 46540120 46540324 -25613558 + MER58A DNA MER1_type 19 223 -1 271 213 62 50 chr20 46540504 46540584 -25613298 + L2 LINE L2 3173 3253 -60 309 367 33 0 chr20 46540592 46540712 -25613170 + L2 LINE L2 3180 3303 -10 2003 132 0 28 chr20 46541543 46541831 -25612051 + AluSx SINE Alu 1 280 -32 915 92 0 0 chr20 46541833 46541844 -25612038 + (GAA)n Simple_repeat Simple_repeat 1 142 0 915 92 0 0 chr20 46541844 46541975 -25611907 + (GAA)n Simple_repeat Simple_repeat 3 133 0 775 257 37 107 chr20 46542196 46542821 -25611061 - MLT1G LTR MaLR -20 575 1 342 0 0 0 chr20 46543533 46543571 -25610311 + (CA)n Simple_repeat Simple_repeat 2 39 0 733 320 48 37 chr20 46544190 46544797 -25609085 + L2 LINE L2 2698 3309 -4 814 274 48 24 chr20 46545377 46545625 -25608257 - MIR SINE MIR -6 256 3 489 270 148 109 chr20 46545804 46546197 -25607685 - L2 LINE L2 0 3313 2906 1384 295 68 40 chr20 46547366 46547943 -25605939 + MLT1E LTR MaLR 1 593 0 294 261 29 0 chr20 46547956 46548030 -25605852 - MIR SINE MIR -94 114 40 2105 134 10 0 chr20 46548243 46548550 -25605332 + AluSg SINE Alu 1 310 0 265 206 47 0 chr20 46548558 46548665 -25605217 + GA-rich Low_complexity Low_complexity 1 112 0 583 133 23 0 chr20 46549215 46549319 -25604563 + MER5A DNA MER1_type 6 112 -77 399 309 138 0 chr20 46549367 46549490 -25604392 - MIR3 SINE MIR -49 159 20 348 304 0 0 chr20 46550325 46550404 -25603478 - L2 LINE L2 -51 3221 3143 398 261 88 51 chr20 46550797 46551012 -25602870 - L1ME2 LINE L1 -10 6154 5932 280 330 74 49 chr20 46551012 46551427 -25602455 - L2 LINE L2 -235 3037 2615 399 223 33 41 chr20 46551638 46551759 -25602123 - MIR SINE MIR -131 131 12 570 323 56 33 chr20 46552599 46552995 -25600887 - Tigger8 DNA MER2_type -32 634 230 208 297 0 62 chr20 46553415 46553479 -25600403 + MER91 DNA MER1_type 81 140 0 1515 195 56 3 chr20 46553651 46553954 -25599928 + L1MD2 LINE L1 6039 6357 -2 499 288 38 103 chr20 46554262 46554769 -25599113 - L1MEd LINE L1 -5154 965 492 658 283 92 27 chr20 46556159 46556495 -25597387 - MLT1L LTR MaLR -28 587 230 441 0 0 0 chr20 46556686 46556735 -25597147 + (TG)n Simple_repeat Simple_repeat 2 50 0 2829 126 0 51 chr20 46558191 46558642 -25595240 + Tigger2a DNA MER2_type 7 434 0 380 269 154 0 chr20 46559315 46559445 -25594437 - MIR SINE MIR -24 238 89 2045 127 3 13 chr20 46559543 46559842 -25594040 - AluSx SINE Alu -16 296 1 1092 185 24 5 chr20 46560010 46560215 -25593667 - MER3 DNA MER1_type 0 209 1 1398 208 22 6 chr20 46560324 46560642 -25593240 + MER33 DNA MER1_type 1 323 -1 1148 200 0 0 chr20 46560711 46560916 -25592966 - MER3 DNA MER1_type 0 209 5 219 318 112 9 chr20 46562832 46562939 -25590943 + L2 LINE L2 3136 3253 -19 564 218 9 0 chr20 46563423 46563533 -25590349 + MER81 DNA DNA 1 111 -3 494 227 173 0 chr20 46565200 46565350 -25588532 + MER5A DNA MER1_type 12 187 -2 215 235 0 20 chr20 46566206 46566257 -25587625 + CT-rich Low_complexity Low_complexity 5 54 0 208 360 63 9 chr20 46566570 46566681 -25587201 + MIR3 SINE MIR 81 197 -11 245 27 0 0 chr20 46567022 46567059 -25586823 + L1PA3 LINE L1 6119 6155 0 313 208 0 13 chr20 46567533 46567610 -25586272 + L1ME4a LINE L1 6046 6121 0 205 298 53 23 chr20 46567931 46568062 -25585820 + MIR3 SINE MIR 48 182 -26 462 259 42 88 chr20 46568116 46568309 -25585573 - L2 LINE L2 -4 3309 3126 1603 273 62 60 chr20 46568309 46568859 -25585023 - MLT1G LTR MaLR -15 575 27 2017 128 0 0 chr20 46568859 46569140 -25584742 + AluSx SINE Alu 27 307 -5 1603 273 62 60 chr20 46569140 46569168 -25584714 - MLT1G LTR MaLR -563 27 1 2509 269 75 11 chr20 46569309 46570121 -25583761 - L2 LINE L2 -330 2983 2101 344 304 132 29 chr20 46570135 46570415 -25583467 - L2 LINE L2 -43 3229 2921 390 313 23 40 chr20 46570843 46571019 -25582863 + MIR3 SINE MIR 30 202 -6 462 219 5 181 chr20 46571218 46571433 -25582449 + MER5B DNA MER1_type 1 177 -1 312 240 130 0 chr20 46573030 46573130 -25580752 + MIR SINE MIR 31 143 -65 190 396 50 10 chr20 46573206 46573307 -25580575 - L2 LINE L2 -15 3257 3153 569 251 0 59 chr20 46574251 46574438 -25579444 - MER91B DNA MER1_type 0 190 15 473 295 0 0 chr20 46574579 46574684 -25579198 - MER81 DNA DNA 0 114 10 4816 50 16 15 chr20 46574734 46575348 -25578534 + L1PA8 LINE L1 5558 6172 0 235 239 0 0 chr20 46575458 46575504 -25578378 - L2 LINE L2 -24 3248 3203 470 238 60 36 chr20 46575564 46575732 -25578150 - L1ME1 LINE L1 -15 6151 5980 2387 86 0 10 chr20 46576755 46577056 -25576826 + AluSp SINE Alu 1 298 -15 387 320 34 23 chr20 46577167 46577342 -25576540 + L2 LINE L2 2852 3028 -285 2519 197 61 20 chr20 46577346 46577884 -25575998 - MER90 LTR ERV1 -15 560 1 370 287 57 0 chr20 46578018 46578140 -25575742 + MIR3 SINE MIR 77 205 -3 198 0 0 0 chr20 46578196 46578218 -25575664 + (A)n Simple_repeat Simple_repeat 1 22 0 291 249 171 58 chr20 46578917 46579210 -25574672 + L3 LINE CR1 1246 1571 -6 352 296 35 0 chr20 46579477 46579592 -25574290 - L2 LINE L2 -220 3052 2934 262 355 28 0 chr20 46579727 46579834 -25574048 - L2 LINE L2 -583 2731 2622 704 200 7 0 chr20 46579873 46580018 -25573864 - MER5B DNA MER1_type -16 162 17 228 311 0 0 chr20 46580444 46580505 -25573377 + GA-rich Low_complexity Low_complexity 3 63 0 775 252 4 57 chr20 46580888 46580927 -25572955 + MER58A DNA MER1_type 5 44 -2376 465 19 0 0 chr20 46580927 46580981 -25572901 + (TCTA)n Simple_repeat Simple_repeat 4 57 0 2061 126 7 0 chr20 46580981 46581259 -25572623 - AluSg SINE Alu -30 280 1 775 252 4 57 chr20 46581259 46581448 -25572434 + MER58A DNA MER1_type 42 222 -2 281 264 28 0 chr20 46582031 46582103 -25571779 + L2 LINE L2 2264 2337 -977 310 320 0 13 chr20 46582179 46582332 -25571550 + L2 LINE L2 2336 2486 -828 1226 287 75 23 chr20 46582351 46582794 -25571088 + LTR16C LTR ERVL 17 482 -9 835 252 105 57 chr20 46582827 46582904 -25570978 + L2 LINE L2 2549 2621 -692 2359 83 0 7 chr20 46582904 46583205 -25570677 - AluY SINE Alu -12 299 1 835 252 105 57 chr20 46583205 46583565 -25570317 + L2 LINE L2 2621 3002 -311 1630 139 97 29 chr20 46583619 46583929 -25569953 + MER44D DNA MER2_type 9 609 0 687 262 100 15 chr20 46583932 46584203 -25569679 + L2 LINE L2 3020 3313 0 314 286 167 0 chr20 46585439 46585565 -25568317 + MIR SINE MIR 9 155 -107 358 301 34 23 chr20 46585741 46585917 -25567965 - L2 LINE L2 -569 2745 2568 225 0 0 0 chr20 46586290 46586315 -25567567 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 693 235 145 8 chr20 46586914 46587148 -25566734 + LTR16C LTR ERVL 226 491 0 542 268 50 25 chr20 46588075 46588273 -25565609 - LTR33 LTR ERVL -233 288 86 924 243 0 0 chr20 46588273 46588454 -25565428 + MER5A DNA MER1_type 3 183 -6 241 218 128 0 chr20 46588467 46588545 -25565337 - LTR33 LTR ERVL -433 88 1 194 268 134 21 chr20 46588615 46588712 -25565170 + MIR SINE MIR 36 143 -65 287 301 30 30 chr20 46588810 46588943 -25564939 - MIR3 SINE MIR -43 165 33 1589 263 75 4 chr20 46589310 46589763 -25564119 + LTR16C LTR ERVL 5 489 -2 225 0 0 0 chr20 46590221 46590246 -25563636 + (A)n Simple_repeat Simple_repeat 1 25 0 317 287 70 31 chr20 46590658 46590787 -25563095 + MIR SINE MIR 98 231 -31 927 158 6 0 chr20 46590953 46591111 -25562771 - MER5A DNA MER1_type -8 181 23 257 262 126 49 chr20 46591177 46591354 -25562528 - MIR SINE MIR -60 202 16 207 333 20 30 chr20 46591499 46591598 -25562284 - L2 LINE L2 -372 2941 2844 943 174 53 39 chr20 46591655 46591862 -25562020 - MER63A DNA MER1_type 0 210 1 253 196 0 0 chr20 46592576 46592622 -25561260 - L2 LINE L2 -12 3260 3215 6477 132 27 15 chr20 46592624 46593158 -25560724 - L1MC2 LINE L1 -21 6323 5797 2059 163 8 3 chr20 46593158 46593519 -25560363 - MER47A DNA MER2_type -3 363 1 6477 132 27 15 chr20 46593519 46594111 -25559771 - L1MC2 LINE L1 -547 5797 5184 239 262 262 28 chr20 46594115 46594260 -25559622 - MIR SINE MIR -51 211 33 212 234 0 0 chr20 46594806 46594853 -25559029 + L2 LINE L2 3266 3312 -1 400 235 20 10 chr20 46595415 46595517 -25558365 + MIR SINE MIR 57 159 -103 298 156 0 62 chr20 46595773 46595837 -25558045 + L2 LINE L2 3213 3272 0 1304 235 106 41 chr20 46595868 46596331 -25557551 + LTR33A LTR ERVL 2 494 -29 283 244 103 55 chr20 46596357 46596529 -25557353 + MIR SINE MIR 16 192 -69 232 333 22 0 chr20 46596557 46596647 -25557235 - L2 LINE L2 -22 3291 3200 187 327 133 0 chr20 46597301 46597414 -25556468 - MIR SINE MIR -43 219 92 243 240 289 0 chr20 46597459 46597580 -25556302 + MIR SINE MIR 101 256 -6 209 283 0 17 chr20 46597949 46598009 -25555873 + (TTCA)n Simple_repeat Simple_repeat 1 59 0 240 111 0 0 chr20 46599063 46599108 -25554774 + (CAGA)n Simple_repeat Simple_repeat 2 46 0 1044 239 56 50 chr20 46599112 46599488 -25554394 + LTR33A LTR ERVL 144 521 -2 334 272 52 51 chr20 46599741 46599950 -25553932 - L2 LINE L2 -86 3186 2976 452 308 91 10 chr20 46599973 46600171 -25553711 - MIR SINE MIR -48 214 1 500 345 23 6 chr20 46600257 46600431 -25553451 - MIR SINE MIR -66 196 20 335 248 181 0 chr20 46601088 46601193 -25552689 + MIR SINE MIR 47 170 -92 444 310 110 26 chr20 46601338 46601648 -25552234 - LTR33 LTR ERVL -182 339 4 795 273 148 29 chr20 46602452 46602836 -25551046 - L2 LINE L2 -3 3310 2881 254 359 168 27 chr20 46602936 46603156 -25550726 + L2 LINE L2 3020 3270 -2 210 348 125 24 chr20 46603550 46603878 -25550004 - L2 LINE L2 -388 2926 2566 306 217 75 42 chr20 46604177 46604297 -25549585 - MIR SINE MIR 0 262 139 2261 128 8 31 chr20 46604299 46604682 -25549200 - L1PB4 LINE L1 -1 6155 5782 232 178 0 0 chr20 46604709 46604754 -25549128 + (TA)n Simple_repeat Simple_repeat 2 46 0 421 109 10 27 chr20 46604756 46604852 -25549030 - L1PB4 LINE L1 -365 5791 5712 564 219 8 31 chr20 46604856 46604984 -25548898 - MIR SINE MIR -136 126 2 201 175 0 0 chr20 46605618 46605658 -25548224 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 268 310 202 0 chr20 46606305 46606434 -25547448 - MIR SINE MIR 0 262 108 584 299 51 24 chr20 46606956 46607250 -25546632 + L1ME4a LINE L1 5565 5866 -255 252 0 0 0 chr20 46607437 46607465 -25546417 + (T)n Simple_repeat Simple_repeat 1 28 0 245 353 24 35 chr20 46608216 46608386 -25545496 + L2 LINE L2 1314 1481 -1833 294 266 13 0 chr20 46608405 46608484 -25545398 - MER116 DNA Mariner 0 80 1 419 325 150 18 chr20 46608544 46608990 -25544892 + L2 LINE L2 1581 2085 -1229 357 252 98 49 chr20 46609336 46609479 -25544403 - MIR3 SINE MIR -46 162 13 221 162 27 0 chr20 46609662 46609699 -25544183 - L2 LINE L2 -25 3247 3210 802 216 46 55 chr20 46609764 46609982 -25543900 + MIR SINE MIR 47 262 0 237 330 119 0 chr20 46609980 46610096 -25543786 - MIR SINE MIR -124 138 9 181 195 73 0 chr20 46610096 46610137 -25543745 + MER5C DNA MER1_type 1 44 -280 621 195 17 75 chr20 46610157 46610331 -25543551 - MER103 DNA DNA -1 165 2 381 271 41 41 chr20 46610774 46610944 -25542938 + MIR SINE MIR 76 245 -17 230 0 33 0 chr20 46611120 46611150 -25542732 + (TCTCTG)n Simple_repeat Simple_repeat 2 32 0 513 333 78 49 chr20 46611331 46611723 -25542159 - L2 LINE L2 -1 3312 2904 1274 129 9 44 chr20 46611723 46611948 -25541934 + MER20 DNA MER1_type 3 219 0 513 333 78 49 chr20 46611948 46612006 -25541876 - L2 LINE L2 -409 2904 2849 1110 213 14 9 chr20 46612069 46612285 -25541597 - MIR SINE MIR 0 262 46 1678 279 16 2 chr20 46612673 46613124 -25540758 - LTR16A1 LTR ERVL 0 457 1 642 255 52 26 chr20 46613691 46613922 -25539960 - LTR16A1 LTR ERVL -4 453 217 442 195 0 0 chr20 46613953 46614035 -25539847 - MER81 DNA DNA -16 98 17 434 269 14 14 chr20 46614111 46614252 -25539630 - LTR16A1 LTR ERVL -305 152 12 619 312 58 87 chr20 46614256 46614643 -25539239 + L2 LINE L2 2637 2992 -280 816 229 63 32 chr20 46614643 46614896 -25538986 + MIR SINE MIR 2 262 0 619 312 58 87 chr20 46614896 46615170 -25538712 + L2 LINE L2 2992 3272 0 390 308 8 0 chr20 46615724 46615841 -25538041 - MER103 DNA DNA -46 120 3 2070 88 0 18 chr20 46616163 46616435 -25537447 + AluSg SINE Alu 35 301 -9 306 370 51 14 chr20 46616666 46616804 -25537078 - MIR SINE MIR -19 243 101 210 229 181 0 chr20 46617308 46617391 -25536491 - MIR SINE MIR -58 204 107 264 238 69 89 chr20 46617634 46617735 -25536147 + MIR SINE MIR 151 249 -13 266 258 72 21 chr20 46617794 46617891 -25535991 + L2 LINE L2 3204 3305 -8 623 222 31 72 chr20 46618024 46618218 -25535664 - MIR SINE MIR -75 187 2 235 209 0 0 chr20 46619241 46619284 -25534598 + GA-rich Low_complexity Low_complexity 2 44 0 292 267 33 22 chr20 46619924 46620014 -25533868 + L3 LINE CR1 1427 1517 -60 187 296 14 56 chr20 46620045 46620116 -25533766 - L2 LINE L2 -19 3294 3227 262 292 92 49 chr20 46620246 46620431 -25533451 - MIR SINE MIR -6 256 64 1000 260 47 11 chr20 46621104 46621381 -25532501 - LTR16C LTR ERVL -22 469 183 872 251 0 5 chr20 46621939 46622130 -25531752 - MLT1A2 LTR MaLR -2 372 183 924 163 0 0 chr20 46622151 46622292 -25531590 - FLAM_C SINE Alu -2 141 1 730 189 13 20 chr20 46622298 46622451 -25531431 - MLT1A2 LTR MaLR -213 152 1 1704 101 0 13 chr20 46622795 46623023 -25530859 + AluSg/x SINE Alu 84 308 -2 583 231 150 12 chr20 46623023 46623183 -25530699 + MER5A DNA MER1_type 8 189 0 185 260 110 27 chr20 46624699 46624772 -25529110 - L2 LINE L2 -38 3234 3156 198 176 0 0 chr20 46624814 46624848 -25529034 + L2 LINE L2 3228 3261 -11 445 304 53 0 chr20 46625085 46625256 -25528626 - MIR3 SINE MIR -25 183 4 223 254 18 0 chr20 46625718 46625773 -25528109 + (TG)n Simple_repeat Simple_repeat 1 56 0 296 243 43 79 chr20 46626374 46626514 -25527368 - MIR SINE MIR -108 154 20 194 245 132 0 chr20 46626935 46626988 -25526894 + MIR3 SINE MIR 97 156 -52 183 307 102 44 chr20 46627091 46627228 -25526654 - MIR SINE MIR -24 238 94 258 220 0 0 chr20 46627274 46627333 -25526549 + (TGAA)n Simple_repeat Simple_repeat 1 59 0 413 278 48 72 chr20 46628920 46629281 -25524601 - L2 LINE L2 -151 3121 2771 1448 138 93 90 chr20 46629603 46629868 -25524014 + AluJo SINE Alu 1 269 -43 2014 131 10 3 chr20 46629868 46630158 -25523724 - AluSx SINE Alu -20 292 1 1448 138 93 90 chr20 46630158 46630203 -25523679 + AluJo SINE Alu 269 312 0 1168 268 101 65 chr20 46630618 46631455 -25522427 - L2 LINE L2 0 3313 2462 1446 151 7 99 chr20 46631461 46631587 -25522295 + AluJb SINE Alu 18 154 -158 2040 120 28 0 chr20 46631587 46631871 -25522011 - AluSx SINE Alu -20 292 1 1446 151 7 99 chr20 46631871 46632048 -25521834 + AluJb SINE Alu 154 293 -19 181 213 164 0 chr20 46632048 46632109 -25521773 - L2 LINE L2 -841 2473 2403 377 186 0 19 chr20 46633379 46633459 -25520423 + MLT1D LTR MaLR 1 69 -436 389 344 33 7 chr20 46633919 46634070 -25519812 + MIR3 SINE MIR 33 187 -21 254 148 19 0 chr20 46634655 46634709 -25519173 + CT-rich Low_complexity Low_complexity 2 56 0 237 301 14 14 chr20 46636379 46636452 -25517430 - MIR SINE MIR -149 113 41 255 31 0 0 chr20 46637345 46637377 -25516505 + (CA)n Simple_repeat Simple_repeat 2 33 0 369 248 10 30 chr20 46637575 46637676 -25516206 - MIR SINE MIR -3 259 161 1199 225 5 0 chr20 46637676 46637898 -25515984 - MER58A DNA MER1_type -1 223 1 2325 114 3 0 chr20 46638578 46638885 -25514997 - AluSg SINE Alu -2 308 1 1928 123 0 63 chr20 46638932 46639260 -25514622 + AluSc SINE Alu 1 309 0 954 203 63 10 chr20 46639268 46639475 -25514407 - MER20 DNA MER1_type -1 218 1 274 228 250 11 chr20 46639608 46639700 -25514182 - MIR SINE MIR -109 153 40 888 39 0 0 chr20 46639724 46639828 -25514054 - AluY SINE Alu -2 309 206 359 245 173 22 chr20 46639956 46640095 -25513787 - MIR SINE MIR -55 207 48 2156 135 30 0 chr20 46640240 46640544 -25513338 + AluSq SINE Alu 1 313 0 367 347 24 18 chr20 46641321 46641488 -25512394 - L2 LINE L2 -183 3089 2922 279 313 15 60 chr20 46642329 46642463 -25511419 + MIR3 SINE MIR 73 190 -18 691 241 24 6 chr20 46644158 46644324 -25509558 - MIR3 SINE MIR -3 205 37 681 236 147 0 chr20 46645139 46645296 -25508586 + MER5A DNA MER1_type 10 189 0 202 231 15 31 chr20 46645479 46645544 -25508338 + CT-rich Low_complexity Low_complexity 4 67 0 348 286 13 91 chr20 46646891 46647045 -25506837 - MIR SINE MIR -6 256 115 214 329 143 24 chr20 46647615 46647825 -25506057 - L2 LINE L2 -227 3045 2811 214 260 48 103 chr20 46648725 46648872 -25505010 - MIR SINE MIR -70 192 55 584 315 38 5 chr20 46649321 46649534 -25504348 - MIR SINE MIR -37 225 6 253 266 96 34 chr20 46653825 46653942 -25499940 - MIR SINE MIR -58 150 61 327 215 25 13 chr20 46653951 46654030 -25499852 + MER5A DNA MER1_type 3 82 -107 492 252 160 82 chr20 46654076 46654500 -25499382 - MLT1H LTR MaLR 0 549 45 1723 187 3 7 chr20 46654521 46654834 -25499048 + AluJb SINE Alu 1 312 0 264 289 0 26 chr20 46654956 46655032 -25498850 - MER5A DNA MER1_type -85 104 31 251 312 0 13 chr20 46654973 46655050 -25498832 + MER5A DNA MER1_type 114 189 0 * 248 264 238 8 chr20 46655659 46655894 -25497988 - L1ME4a LINE L1 -11 6110 5822 2440 79 3 10 chr20 46660137 46660441 -25493441 + AluSq SINE Alu 1 302 -11 257 200 85 46 chr20 46660477 46660607 -25493275 + L1 LINE L1 3835 3969 -2177 545 301 25 93 chr20 46660651 46661047 -25492835 + MLT1I LTR MaLR 2 370 -39 1117 251 96 51 chr20 46661207 46661741 -25492141 - MLT1H1 LTR MaLR 0 555 1 280 230 0 35 chr20 46661802 46661889 -25491993 + L1 LINE L1 4256 4339 -1807 245 299 68 34 chr20 46661953 46662274 -25491608 + L1P LINE L1 4360 4691 -1455 278 233 143 37 chr20 46665234 46665395 -25488487 + MLT1I LTR MaLR 277 409 0 696 257 71 0 chr20 46665405 46665588 -25488294 - MIR SINE MIR -65 197 2 2179 110 53 31 chr20 46665694 46666050 -25487832 - THE1B LTR MaLR 0 364 1 282 304 72 50 chr20 46666252 46666478 -25487404 + MIR SINE MIR 33 262 0 312 153 28 28 chr20 46666909 46666981 -25486901 - MER116 DNA Mariner -8 72 1 319 239 134 22 chr20 46667269 46667379 -25486503 + MIR3 SINE MIR 38 162 -46 317 287 134 6 chr20 46667379 46667536 -25486346 - MER5B DNA MER1_type 0 178 2 1662 177 36 0 chr20 46668613 46668890 -25484992 + AluJo SINE Alu 14 300 -12 378 252 139 0 chr20 46669645 46669760 -25484122 - MER94 DNA DNA -3 131 1 209 284 11 74 chr20 46669909 46670004 -25483878 + L2 LINE L2 3184 3272 0 1014 9 0 0 chr20 46671382 46671495 -25482387 - L1PA2 LINE L1 -3 6152 6040 204 220 0 20 chr20 46671966 46672016 -25481866 + MIR3 SINE MIR 154 202 -6 369 275 11 0 chr20 46673192 46673314 -25480568 + MER5A DNA MER1_type 17 150 -39 902 232 101 0 chr20 46673370 46673568 -25480314 + MER58A DNA MER1_type 7 224 0 543 218 32 0 chr20 46675051 46675175 -25478707 + LTR16C LTR ERVL 364 491 0 229 297 68 0 chr20 46675839 46675913 -25477969 - L2 LINE L2 0 3272 3194 666 201 14 0 chr20 46675989 46676128 -25477754 + MIR SINE MIR 8 148 -114 252 229 86 14 chr20 46676804 46676874 -25477008 + MER5A DNA MER1_type 115 189 0 1753 263 57 30 chr20 46677319 46677367 -25476515 - MLT1G LTR MaLR 0 590 545 2008 102 11 4 chr20 46677367 46677670 -25476212 + AluSq SINE Alu 9 313 0 1753 263 57 30 chr20 46677670 46678186 -25475696 - MLT1G LTR MaLR -45 545 10 234 81 0 0 chr20 46679668 46679705 -25474177 + (CA)n Simple_repeat Simple_repeat 2 38 0 322 229 193 0 chr20 46680694 46680803 -25473079 + MIR SINE MIR 29 158 -104 2048 204 40 50 chr20 46681246 46681750 -25472132 + MLT1D LTR MaLR 3 501 -4 285 327 0 10 chr20 46681754 46681858 -25472024 + MIR SINE MIR 154 256 -6 219 293 179 0 chr20 46682340 46682480 -25471402 + L2 LINE L2 3106 3270 -2 825 291 23 77 chr20 46682729 46683121 -25470761 - MLT1I LTR MaLR 0 409 39 206 125 0 0 chr20 46683158 46683190 -25470692 - L2 LINE L2 -91 3222 3191 350 311 56 22 chr20 46683192 46683372 -25470510 - MER5A DNA MER1_type 0 189 4 663 269 84 0 chr20 46684666 46684893 -25468989 - MIR SINE MIR 0 262 17 2477 113 46 10 chr20 46686289 46686680 -25467202 + L1MA8 LINE L1 5402 5806 -494 2732 153 47 12 chr20 46686778 46687269 -25466613 + L1MA8 LINE L1 5782 6289 -2 28 0 0 0 chr20 46687270 46687298 -25466584 + AT_rich Low_complexity Low_complexity 1 28 0 365 324 128 0 chr20 46687761 46687909 -25465973 - MIR SINE MIR -58 204 38 417 290 97 10 chr20 46688161 46688352 -25465530 + MIR SINE MIR 46 251 -11 241 293 179 0 chr20 46688426 46688532 -25465350 + MIR SINE MIR 138 262 0 537 257 188 9 chr20 46689931 46690149 -25463733 + MIR SINE MIR 2 258 -4 881 259 133 7 chr20 46690279 46690573 -25463309 + LTR16C LTR ERVL 161 491 0 267 220 0 0 chr20 46690726 46690776 -25463106 - L2 LINE L2 -20 3252 3203 210 236 0 0 chr20 46692051 46692106 -25461776 + CT-rich Low_complexity Low_complexity 2 56 0 1541 220 90 11 chr20 46692116 46692470 -25461412 + MLT1E LTR MaLR 212 593 0 451 296 34 11 chr20 46692707 46692886 -25460996 - MIR SINE MIR -65 197 15 1098 228 70 98 chr20 46693430 46693920 -25459962 - MLT1F1 LTR MaLR -85 482 3 793 209 129 0 chr20 46694381 46694582 -25459300 + MIR SINE MIR 7 233 -29 371 277 72 10 chr20 46694731 46694868 -25459014 - MIR3 SINE MIR -66 142 13 2299 177 28 9 chr20 46695654 46696077 -25457805 + MSTB1 LTR MaLR 2 432 0 933 324 59 5 chr20 46696201 46696593 -25457289 - LTR16B LTR ERVL 0 464 52 587 221 60 101 chr20 46697933 46698150 -25455732 - MER63A DNA MER1_type 0 210 3 272 70 23 0 chr20 46698200 46698243 -25455639 + (TG)n Simple_repeat Simple_repeat 2 45 0 1047 187 94 0 chr20 46698449 46698652 -25455230 + MER58A DNA MER1_type 1 222 -2 409 323 0 0 chr20 46698901 46699034 -25454848 + MIR SINE MIR 65 197 -65 233 260 0 27 chr20 46699741 46699814 -25454068 + LTR16C LTR ERVL 36 106 -385 851 283 49 0 chr20 46699848 46700134 -25453748 + LTR16C LTR ERVL 192 491 0 791 325 78 19 chr20 46700190 46700715 -25453167 + L2 LINE L2 2766 3313 0 1588 118 137 0 chr20 46700887 46701142 -25452740 + AluJb SINE Alu 1 290 -12 308 333 67 13 chr20 46702012 46702162 -25451720 + MIR SINE MIR 21 178 -84 315 119 87 6 chr20 46702206 46702282 -25451600 + MLT1I LTR MaLR 85 141 -268 289 256 56 22 chr20 46702419 46702509 -25451373 + MLT1H LTR MaLR 454 546 -3 543 318 26 0 chr20 46703186 46703378 -25450504 + MIR SINE MIR 11 207 -55 312 300 114 48 chr20 46703438 46703648 -25450234 - L2 LINE L2 -48 3224 3001 394 287 143 14 chr20 46703779 46703988 -25449894 - MIR SINE MIR -6 256 21 248 176 0 20 chr20 46704613 46704664 -25449218 - MLT2B2 LTR ERVL -7 513 464 243 146 0 0 chr20 46704673 46704714 -25449168 + (CA)n Simple_repeat Simple_repeat 2 42 0 2457 164 111 0 chr20 46704715 46705147 -25448735 - MLT2B2 LTR ERVL -35 480 1 2188 113 0 20 chr20 46706228 46706529 -25447353 + AluSx SINE Alu 1 295 -17 337 277 15 42 chr20 46706807 46706998 -25446884 - L1M4 LINE L1 -370 5751 5618 314 330 17 0 chr20 46706998 46707116 -25446766 - MIR SINE MIR -67 141 22 243 265 72 0 chr20 46707409 46707492 -25446390 + MIR SINE MIR 112 200 -62 1005 224 28 28 chr20 46707505 46707755 -25446127 - MIR SINE MIR -1 261 12 519 17 0 0 chr20 46708448 46708508 -25445374 + (TAGA)n Simple_repeat Simple_repeat 2 61 0 191 287 179 20 chr20 46708825 46709020 -25444862 - L2 LINE L2 -238 3034 2809 362 247 0 34 chr20 46709413 46709502 -25444380 + MLT1J2 LTR MaLR 23 108 -342 2272 104 3 10 chr20 46709606 46709914 -25443968 - AluSx SINE Alu -5 307 2 273 295 191 0 chr20 46710069 46710242 -25443640 + LTR16C LTR ERVL 286 491 0 261 256 189 0 chr20 46710242 46710332 -25443550 + MLT1J2 LTR MaLR 102 208 -242 304 307 0 0 chr20 46710778 46710866 -25443016 + L2 LINE L2 3184 3271 -1 332 273 55 18 chr20 46711260 46711370 -25442512 + MIR SINE MIR 74 187 -75 2348 82 3 29 chr20 46711872 46712188 -25441694 + AluY SINE Alu 2 309 -2 437 237 40 3 chr20 46712990 46713142 -25440740 - MIR SINE MIR -68 140 36 418 308 103 6 chr20 46713270 46713426 -25440456 + MER5B DNA MER1_type 8 178 0 217 303 148 21 chr20 46713526 46713668 -25440214 - L3 LINE CR1 -586 991 832 22 0 0 0 chr20 46714389 46714411 -25439471 + AT_rich Low_complexity Low_complexity 1 22 0 242 288 55 36 chr20 46715122 46715341 -25438541 + L1M4 LINE L1 2213 2435 -3711 9551 92 50 88 chr20 46715487 46717129 -25436753 + THE1C-int LTR MaLR 1 1580 0 2714 101 8 8 chr20 46717129 46717504 -25436378 + THE1C LTR MaLR 1 375 0 296 292 123 13 chr20 46717520 46717674 -25436208 + L1MC/D LINE L1 5622 5792 -2016 387 0 0 0 chr20 46718053 46718096 -25435786 + (TG)n Simple_repeat Simple_repeat 2 44 0 879 206 6 12 chr20 46718251 46718416 -25435466 - FRAM SINE Alu -1 165 2 241 205 112 13 chr20 46718784 46718870 -25435012 - MIR SINE MIR -87 121 20 188 245 20 0 chr20 46719835 46719884 -25433998 + MIR3 SINE MIR 150 199 -9 288 203 43 0 chr20 46720095 46720164 -25433718 - MLT1K LTR MaLR 0 588 517 307 219 66 39 chr20 46720595 46720702 -25433180 - MIR SINE MIR -47 161 50 307 239 78 56 chr20 46720779 46720921 -25432961 - L1ME4a LINE L1 -49 6072 5928 720 203 157 42 chr20 46720970 46721187 -25432695 + LTR16A1 LTR ERVL 1 242 -215 230 284 46 28 chr20 46721242 46721351 -25432531 + LTR16A1 LTR ERVL 341 451 -6 502 311 107 49 chr20 46721907 46722108 -25431774 - L1M4 LINE L1 -1538 4608 4420 2384 80 7 0 chr20 46722108 46722407 -25431475 + AluSg SINE Alu 1 301 -9 502 311 107 49 chr20 46722407 46722857 -25431025 - L1M4 LINE L1 -1726 4420 3919 203 352 107 25 chr20 46722884 46723080 -25430802 + MIR SINE MIR 2 213 -49 268 341 41 0 chr20 46723099 46723222 -25430660 - L1M4 LINE L1 -2306 3840 3713 484 285 49 8 chr20 46723423 46723629 -25430253 - MIR SINE MIR -3 259 50 489 283 68 34 chr20 46723717 46724042 -25429840 - L1M4 LINE L1 -2726 3420 3085 11877 217 26 41 chr20 46724096 46727039 -25426843 + L1M2 LINE L1 1 2900 -3948 21 36 0 0 chr20 46727040 46727068 -25426814 + GC_rich Low_complexity Low_complexity 1 28 0 213 200 0 47 chr20 46728434 46728519 -25425363 + GA-rich Low_complexity Low_complexity 2 82 0 181 194 0 0 chr20 46728731 46728767 -25425115 - L2 LINE L2 -1906 1408 1373 6415 202 34 27 chr20 46729936 46730178 -25423704 + L1M2 LINE L1 2878 3117 -3731 297 0 0 0 chr20 46730178 46730211 -25423671 + (CA)n Simple_repeat Simple_repeat 2 34 0 6415 202 34 27 chr20 46730211 46731580 -25422302 + L1M2 LINE L1 3117 4500 -2348 600 210 48 0 chr20 46731554 46731678 -25422204 + L1M2 LINE L1 5434 5563 -1285 * 25 31 0 0 chr20 46731695 46731727 -25422155 + AT_rich Low_complexity Low_complexity 1 32 0 180 0 0 0 chr20 46731958 46731978 -25421904 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 627 252 150 60 chr20 46732596 46732910 -25420972 + LTR33A LTR ERVL 7 348 -175 1356 197 28 92 chr20 46733731 46734121 -25419761 + MLT1A1 LTR MaLR 1 365 0 393 243 221 0 chr20 46735804 46735944 -25417938 + MIR SINE MIR 86 256 -6 203 167 0 0 chr20 46736570 46736612 -25417270 + A-rich Low_complexity Low_complexity 2 43 0 21 0 0 0 chr20 46736612 46736633 -25417249 + AT_rich Low_complexity Low_complexity 1 21 0 2102 119 0 14 chr20 46736691 46737018 -25416864 + AluSx SINE Alu 1 323 0 269 241 0 0 chr20 46737188 46737246 -25416636 + G-rich Low_complexity Low_complexity 1 58 0 214 300 100 50 chr20 46737316 46737556 -25416326 + L2 LINE L2 2622 2873 -441 702 291 34 29 chr20 46737616 46738025 -25415857 - L1M4 LINE L1 -1542 4604 4194 900 251 40 14 chr20 46738463 46738686 -25415196 - L1ME1 LINE L1 -53 6113 5885 21 36 0 0 chr20 46740058 46740086 -25413796 + AT_rich Low_complexity Low_complexity 1 28 0 345 283 159 21 chr20 46740276 46740399 -25413483 - MER5A DNA MER1_type -16 173 26 2888 116 120 31 chr20 46740399 46740656 -25413226 - MER1A DNA MER1_type -2173 527 294 2279 98 3 19 chr20 46740656 46740971 -25412911 - AluSg SINE Alu 0 310 1 2888 116 120 31 chr20 46740971 46741197 -25412685 - MER1A DNA MER1_type -2406 294 1 345 283 159 21 chr20 46741197 46741218 -25412664 - MER5A DNA MER1_type -163 26 9 2598 163 49 20 chr20 46741226 46741716 -25412166 - MLT1D LTR MaLR 0 505 2 789 326 59 7 chr20 46742607 46742911 -25410971 + LTR33 LTR ERVL 4 323 -198 272 244 111 11 chr20 46743217 46743307 -25410575 - L2 LINE L2 -49 3223 3125 261 271 206 35 chr20 46743348 46743547 -25410335 - MIR SINE MIR -14 248 16 201 304 134 9 chr20 46743676 46743788 -25410094 + L3 LINE CR1 478 603 -974 756 302 86 15 chr20 46743793 46744061 -25409821 + MER45C DNA AcHobo 338 624 -329 181 136 0 68 chr20 46744373 46744417 -25409465 + L3 LINE CR1 1430 1470 -107 423 291 0 0 chr20 46745025 46745128 -25408754 + MIR3 SINE MIR 83 185 -23 314 350 76 25 chr20 46745235 46745681 -25408201 + L2 LINE L2 2367 2835 -479 210 241 54 54 chr20 46746831 46746943 -25406939 + MIR SINE MIR 96 207 -55 856 156 0 8 chr20 46746998 46747126 -25406756 - FLAM_C SINE Alu -16 127 1 241 256 111 11 chr20 46747152 46747242 -25406640 + L2 LINE L2 3125 3223 -49 226 313 40 30 chr20 46747252 46747351 -25406531 + MIR SINE MIR 163 262 0 224 271 73 62 chr20 46747452 46747629 -25406253 + MIR3 SINE MIR 5 183 -25 200 333 67 7 chr20 46747662 46747797 -25406085 + MIR SINE MIR 49 191 -71 1035 172 17 0 chr20 46747904 46748084 -25405798 + MER5A DNA MER1_type 5 187 -2 283 314 25 8 chr20 46748147 46748265 -25405617 + MIR SINE MIR 33 152 -110 563 261 147 6 chr20 46748493 46748650 -25405232 - MER5A DNA MER1_type -2 187 9 372 350 78 0 chr20 46749016 46749196 -25404686 - L2 LINE L2 -965 2349 2156 446 321 59 27 chr20 46749349 46749570 -25404312 + MIR SINE MIR 28 255 -7 230 218 0 0 chr20 46749862 46749917 -25403965 - MIR SINE MIR -123 139 85 290 217 11 54 chr20 46750910 46751002 -25402880 + L2 LINE L2 3150 3237 -76 1422 234 64 38 chr20 46751630 46752099 -25401783 + LTR16C LTR ERVL 11 491 0 274 240 168 16 chr20 46752350 46752475 -25401407 - L3 LINE CR1 -15 1562 1419 423 296 157 0 chr20 46752521 46752751 -25401131 - L3 LINE CR1 -278 1299 1034 294 313 31 8 chr20 46752861 46752989 -25400893 - L2 LINE L2 0 3313 3183 980 211 10 21 chr20 46753003 46753197 -25400685 + MER58A DNA MER1_type 30 221 -3 393 287 67 36 chr20 46753327 46753522 -25400360 - L2 LINE L2 -5 3308 3108 247 221 0 44 chr20 46754310 46754378 -25399504 + MIR SINE MIR 198 262 0 198 71 0 0 chr20 46754400 46754428 -25399454 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 8451 51 1 0 chr20 46754618 46755583 -25398299 - LTR5 LTR ERVK -3 966 1 362 234 78 54 chr20 46755583 46755750 -25398132 - L2 LINE L2 -891 2423 2253 250 135 77 0 chr20 46755972 46756076 -25397806 + (TA)n Simple_repeat Simple_repeat 1 112 0 702 239 89 9 chr20 46756126 46756339 -25397543 - MIR SINE MIR -27 235 6 379 282 23 30 chr20 46756957 46757088 -25396794 - MIR3 SINE MIR -26 182 53 331 317 16 8 chr20 46757558 46757681 -25396201 - MIR3 SINE MIR -1 207 84 4661 123 4 12 chr20 46757838 46758514 -25395368 + L1PA7 LINE L1 5 675 -5786 15652 84 15 3 chr20 46758514 46761394 -25392488 + L1PA7 LINE L1 3574 6469 0 547 294 0 18 chr20 46761471 46761634 -25392248 + MER5B DNA MER1_type 4 163 -15 2233 118 0 0 chr20 46762313 46762618 -25391264 + AluSx SINE Alu 1 305 -7 1097 162 6 0 chr20 46762954 46763127 -25390755 - FRAM SINE Alu -2 174 1 2039 133 10 3 chr20 46763289 46763583 -25390299 + AluSq SINE Alu 3 298 -15 578 267 69 15 chr20 46764034 46764055 -25389827 - MIR SINE MIR -30 232 214 480 88 25 25 chr20 46764055 46764135 -25389747 + MADE1 DNA Mariner 1 80 0 578 267 69 15 chr20 46764135 46764315 -25389567 - MIR SINE MIR -48 214 20 1157 275 106 19 chr20 46764447 46764617 -25389265 - LTR33 LTR ERVL -2 519 365 2476 116 22 0 chr20 46764617 46764972 -25388910 - THE1B LTR MaLR 0 364 2 1157 275 106 19 chr20 46764972 46765274 -25388608 - LTR33 LTR ERVL -156 365 6 560 289 0 6 chr20 46765560 46765716 -25388166 + MIR SINE MIR 48 202 -60 627 283 38 34 chr20 46766850 46767087 -25386795 - L2 LINE L2 0 3313 3076 2541 147 40 14 chr20 46767670 46768091 -25385791 - MSTB1 LTR MaLR 0 432 1 643 246 32 96 chr20 46768120 46768571 -25385311 - MLT1H LTR MaLR -3 546 32 818 298 8 12 chr20 46768739 46768987 -25384895 - MIR SINE MIR -2 260 14 194 321 0 19 chr20 46769722 46769775 -25384107 - MIR SINE MIR -83 125 74 227 329 86 31 chr20 46770203 46770425 -25383457 - L2 LINE L2 -105 3208 2975 597 239 16 33 chr20 46770502 46770686 -25383196 - MIR SINE MIR 0 262 82 221 336 0 18 chr20 46771640 46771753 -25382129 - L2 LINE L2 -249 3023 2913 300 319 117 35 chr20 46772256 46772538 -25381344 - L2 LINE L2 0 3313 3009 404 311 88 22 chr20 46772582 46772810 -25381072 + MIR SINE MIR 12 254 -8 228 303 0 0 chr20 46772840 46772995 -25380887 + (ATG)n Simple_repeat Simple_repeat 1 155 0 206 292 0 0 chr20 46773367 46773415 -25380467 - L2 LINE L2 -39 3233 3186 * 284 274 57 34 chr20 46773411 46773557 -25380325 - MIR SINE MIR -66 142 14 228 298 123 26 chr20 46773862 46773976 -25379906 - MIR SINE MIR -118 144 20 345 282 51 0 chr20 46774472 46774589 -25379293 + MIR SINE MIR 42 164 -98 340 260 41 118 chr20 46774597 46774961 -25378921 - MLT1I LTR MaLR -4 545 59 228 241 17 0 chr20 46774990 46775048 -25378834 - MLT1G1 LTR MaLR -1 594 536 305 216 85 85 chr20 46775444 46775597 -25378285 + L2 LINE L2 2654 2806 -508 438 294 58 34 chr20 46775612 46775938 -25377944 + L2 LINE L2 2980 3313 0 268 338 46 44 chr20 46776782 46777170 -25376712 + L1ME LINE L1 4871 5259 -887 736 318 68 42 chr20 46777204 46777826 -25376056 + L1MEd LINE L1 12 649 -5470 254 193 133 12 chr20 46777969 46778052 -25375830 + L1ME LINE L1 5380 5472 -2336 180 97 0 0 chr20 46778332 46778363 -25375519 + (TTGG)n Simple_repeat Simple_repeat 2 32 0 4197 163 7 12 chr20 46778373 46779116 -25374766 - L1MB5 LINE L1 -8 6166 5428 260 130 0 0 chr20 46779117 46779163 -25374719 - L1MB5 LINE L1 -1749 4397 4352 318 270 131 15 chr20 46779166 46779303 -25374579 + L1ME LINE L1 5515 5667 -454 2123 140 53 36 chr20 46779305 46779544 -25374338 + L1MA4 LINE L1 5874 6124 -176 192 40 0 0 chr20 46779544 46779569 -25374313 + (TTTA)n Simple_repeat Simple_repeat 1 25 0 2123 140 53 36 chr20 46779569 46779743 -25374139 + L1MA4 LINE L1 6124 6294 -6 2274 141 57 24 chr20 46779794 46780000 -25373882 + L1MA9 LINE L1 5848 6046 -266 1812 164 20 13 chr20 46780000 46780304 -25373578 + AluJo SINE Alu 1 306 -6 2274 141 57 24 chr20 46780304 46780361 -25373521 + L1MA9 LINE L1 6046 6100 -212 2302 117 0 0 chr20 46780361 46780668 -25373214 + AluSx SINE Alu 1 307 -5 2274 141 57 24 chr20 46780668 46780822 -25373060 + L1MA9 LINE L1 6100 6280 -32 302 316 43 43 chr20 46780988 46781197 -25372685 + L1ME4a LINE L1 4500 4708 -1438 450 229 40 27 chr20 46781499 46781699 -25372183 + L1ME4a LINE L1 5683 5880 -241 273 230 24 12 chr20 46782235 46782400 -25371482 + (TA)n Simple_repeat Simple_repeat 2 168 0 392 228 48 12 chr20 46782465 46782632 -25371250 + (TA)n Simple_repeat Simple_repeat 1 173 0 22 35 0 0 chr20 46782731 46782760 -25371122 + AT_rich Low_complexity Low_complexity 1 29 0 202 214 14 14 chr20 46782781 46782851 -25371031 + (TA)n Simple_repeat Simple_repeat 2 71 0 268 233 0 27 chr20 46782914 46782987 -25370895 + L1ME4a LINE L1 5985 6055 -66 945 80 58 0 chr20 46782990 46783127 -25370755 - L1PA7 LINE L1 -1 6153 6009 207 301 54 21 chr20 46783937 46784030 -25369852 - L2 LINE L2 -4 3268 3173 480 184 73 9 chr20 46784219 46784328 -25369554 - MIR SINE MIR -46 216 101 309 302 17 26 chr20 46784421 46784537 -25369345 + MER5A DNA MER1_type 53 167 -22 518 321 70 9 chr20 46784910 46785125 -25368757 - MIR SINE MIR -15 247 20 1354 260 135 0 chr20 46785249 46785634 -25368248 - LTR16C LTR ERVL 0 491 55 202 340 0 19 chr20 46786567 46786673 -25367209 + (TATATG)n Simple_repeat Simple_repeat 1 104 0 518 273 0 37 chr20 46786689 46786850 -25367032 + MIR SINE MIR 64 218 -44 2068 118 16 10 chr20 46786901 46787206 -25366676 - AluSq SINE Alu -6 307 1 375 330 145 31 chr20 46788269 46788620 -25365262 + L1MC4a LINE L1 5549 5939 -1869 687 278 69 52 chr20 46789117 46789481 -25364401 - MLT1I LTR MaLR 0 409 40 222 37 0 0 chr20 46789684 46789711 -25364171 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 316 273 141 0 chr20 46789711 46789810 -25364072 - L2 LINE L2 -13 3300 3188 343 209 76 9 chr20 46790373 46790478 -25363404 + L2 LINE L2 3015 3126 -187 380 128 101 110 chr20 46791412 46791521 -25362361 + MER94 DNA DNA 1 108 -26 492 164 29 48 chr20 46791607 46791711 -25362171 - MER58 DNA MER1_type 0 2420 2319 266 213 307 0 chr20 46791724 46791799 -25362083 - MER58 DNA MER1_type -2321 99 2 241 379 7 0 chr20 46792078 46792218 -25361664 - L2 LINE L2 -550 2764 2624 848 207 17 0 chr20 46792311 46792485 -25361397 + MER45A DNA AcHobo 2 178 0 1645 169 55 95 chr20 46792553 46793069 -25360813 - MSTB LTR MaLR 0 426 4 8797 196 22 2 chr20 46793096 46794698 -25359184 - MSTB-int LTR MaLR -15 1636 2 6462 198 16 6 chr20 46794705 46795878 -25358004 + MSTB-int LTR MaLR 466 1650 -1 2109 159 103 10 chr20 46795879 46796268 -25357614 + MSTB LTR MaLR 1 425 -1 848 279 94 28 chr20 46796548 46797006 -25356876 - LTR16C LTR ERVL 0 491 4 2802 191 99 10 chr20 46797538 46798145 -25355737 + L1MB7 LINE L1 5524 6184 0 824 274 62 41 chr20 46798176 46798643 -25355239 - L2 LINE L2 -46 3267 2791 254 225 42 0 chr20 46799223 46799294 -25354588 + MIR SINE MIR 60 133 -75 727 176 0 27 chr20 46799414 46799562 -25354320 - L1MB8 LINE L1 0 6178 6035 328 213 27 0 chr20 46799656 46799731 -25354151 - MER116 DNA Mariner 0 80 4 2139 150 0 0 chr20 46800174 46800480 -25353402 - AluSx SINE Alu -6 306 1 296 247 75 89 chr20 46800483 46800629 -25353253 + L2 LINE L2 3169 3312 -1 241 200 0 0 chr20 46801892 46801947 -25351935 + MIR SINE MIR 99 153 -109 249 33 0 0 chr20 46802079 46802109 -25351773 + (TA)n Simple_repeat Simple_repeat 2 31 0 189 242 45 15 chr20 46802278 46802344 -25351538 - MIR SINE MIR -86 176 109 366 364 92 33 chr20 46803699 46804158 -25349724 - L2 LINE L2 -1 3312 2827 862 225 100 105 chr20 46805173 46805743 -25348139 - MLT1F1 LTR MaLR 0 567 1 1547 149 0 4 chr20 46805891 46806133 -25347749 - AluSg/x SINE Alu 0 310 70 10122 111 13 30 chr20 46806134 46807678 -25346204 + Tigger1 DNA MER2_type 898 2415 -3 277 197 15 15 chr20 46808107 46808173 -25345709 - MLT1K LTR MaLR -5 583 518 1075 112 11 6 chr20 46808175 46808211 -25345671 + (GAAA)n Simple_repeat Simple_repeat 1 216 0 1075 112 11 6 chr20 46808211 46808390 -25345492 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 428 126 19 29 chr20 46808741 46808844 -25345038 + CT-rich Low_complexity Low_complexity 6 107 0 2226 42 0 0 chr20 46808969 46809231 -25344651 - L1PA5 LINE L1 -30 6124 5863 230 56 0 0 chr20 46809229 46809265 -25344617 + L1PA6 LINE L1 6118 6153 -1 * 189 107 0 0 chr20 46809466 46809494 -25344388 + (A)n Simple_repeat Simple_repeat 1 28 0 4285 166 17 3 chr20 46810691 46811384 -25342498 + L1MB2 LINE L1 5458 6160 -11 366 287 0 37 chr20 46811407 46811515 -25342367 + L2 LINE L2 3210 3313 0 366 261 87 63 chr20 46811852 46812059 -25341823 + HAL1b LINE L1 69 280 -1068 356 301 102 45 chr20 46812661 46812996 -25340886 + L1ME3A LINE L1 2169 2480 -3735 996 251 36 37 chr20 46813076 46813526 -25340356 + L1ME3A LINE L1 2762 3232 -2983 1110 246 53 64 chr20 46813545 46813838 -25340044 + L1ME3A LINE L1 5139 5434 -797 2339 95 3 0 chr20 46813838 46814134 -25339748 + AluSg SINE Alu 7 303 -7 1110 246 53 64 chr20 46814134 46814466 -25339416 + L1ME3A LINE L1 5434 5812 -419 531 220 127 6 chr20 46814596 46814769 -25339113 + L1ME3A LINE L1 5838 6031 -208 273 316 33 46 chr20 46814825 46814977 -25338905 + L1ME3A LINE L1 6031 6180 -59 36 0 0 0 chr20 46814983 46815019 -25338863 + AT_rich Low_complexity Low_complexity 1 36 0 181 304 0 0 chr20 46815161 46815207 -25338675 - L2 LINE L2 -4 3309 3264 1614 226 195 2 chr20 46815402 46815832 -25338050 + MLT1H LTR MaLR 37 549 0 474 289 107 83 chr20 46817100 46817969 -25335913 + L1ME LINE L1 4153 5042 -1104 794 188 10 37 chr20 46817983 46818100 -25335782 - MER8 DNA MER2_type 0 239 82 3012 126 14 0 chr20 46818100 46818528 -25335354 + MER57B LTR ERV1 1 434 0 794 188 10 37 chr20 46818528 46818606 -25335276 - MER8 DNA MER2_type -157 82 3 211 200 40 0 chr20 46818632 46818682 -25335200 + (TA)n Simple_repeat Simple_repeat 1 52 0 243 247 0 72 chr20 46818683 46818780 -25335102 + L1MC4 LINE L1 6614 6703 -1339 242 156 0 0 chr20 46818790 46818835 -25335047 + LTR66 LTR ERVL 394 438 -172 2128 97 0 11 chr20 46818960 46819238 -25334644 + AluSq SINE Alu 12 286 -27 206 23 93 0 chr20 46819238 46819281 -25334601 + (TA)n Simple_repeat Simple_repeat 2 48 0 493 273 71 40 chr20 46819382 46819720 -25334162 + L1ME LINE L1 5255 5617 -504 27 29 0 0 chr20 46819731 46819765 -25334117 + AT_rich Low_complexity Low_complexity 1 34 0 307 273 71 0 chr20 46819765 46819864 -25334018 + L1ME LINE L1 5594 5699 -422 325 333 30 18 chr20 46821311 46821479 -25332403 + LTR67 LTR ERVL 93 262 -295 483 197 53 23 chr20 46821505 46821637 -25332245 + LTR67 LTR ERVL 410 545 -12 969 284 77 52 chr20 46821730 46822212 -25331670 - LTR33 LTR ERVL 0 521 28 195 94 170 57 chr20 46822965 46823018 -25330864 - L2 LINE L2 0 3313 3255 402 290 97 0 chr20 46823121 46823245 -25330637 - MIR SINE MIR 0 262 127 384 300 0 0 chr20 46823773 46823873 -25330009 + MIR SINE MIR 23 122 -140 23 0 0 0 chr20 46824096 46824119 -25329763 + AT_rich Low_complexity Low_complexity 1 23 0 198 189 0 0 chr20 46824508 46824545 -25329337 + MIR SINE MIR 156 192 -70 1024 168 6 0 chr20 46824545 46824706 -25329176 + FRAM SINE Alu 1 154 -22 491 269 156 0 chr20 46824911 46825071 -25328811 - MER5A DNA MER1_type -1 188 4 884 175 10 121 chr20 46825087 46825148 -25328734 - MER5A DNA MER1_type -6 183 117 1816 112 93 11 chr20 46825148 46825416 -25328466 + AluSx SINE Alu 3 292 -20 884 175 10 121 chr20 46825416 46825560 -25328322 - MER5A DNA MER1_type -72 117 1 181 235 148 37 chr20 46826905 46826986 -25326896 + L2 LINE L2 2419 2508 -806 * 318 260 39 0 chr20 46826974 46827051 -25326831 + L2 LINE L2 3185 3264 -49 517 323 44 8 chr20 46827071 46827322 -25326560 + L2 LINE L2 2497 2756 -558 288 250 156 0 chr20 46827713 46827809 -25326073 - MIR SINE MIR -119 143 33 790 332 24 0 chr20 46827912 46828165 -25325717 - MIR SINE MIR 0 262 4 186 374 0 0 chr20 46829279 46829362 -25324520 - MIR SINE MIR -108 154 72 428 167 52 126 chr20 46829505 46829679 -25324203 + MLT1H LTR MaLR 4 164 -385 189 0 0 0 chr20 46831098 46831119 -25322763 + (A)n Simple_repeat Simple_repeat 1 21 0 221 244 0 0 chr20 46831463 46831508 -25322374 + CT-rich Low_complexity Low_complexity 5 49 0 482 253 37 12 chr20 46832018 46832180 -25321702 + (CA)n Simple_repeat Simple_repeat 1 166 0 340 291 27 20 chr20 46832204 46832352 -25321530 + (CATA)n Simple_repeat Simple_repeat 1 149 0 * 344 288 55 6 chr20 46832256 46832419 -25321463 + (CA)n Simple_repeat Simple_repeat 2 172 0 354 196 239 0 chr20 46833127 46833219 -25320663 - L2 LINE L2 -2 3311 3198 259 239 0 0 chr20 46833692 46833738 -25320144 - L2 LINE L2 -91 3181 3136 2569 136 23 77 chr20 46833786 46834264 -25319618 - LTR32 LTR ERVL 0 471 20 216 362 20 0 chr20 46834458 46834610 -25319272 - L2 LINE L2 -435 2879 2725 215 286 125 9 chr20 46834682 46834794 -25319088 + MER5A DNA MER1_type 63 187 -2 282 287 26 113 chr20 46835090 46835195 -25318687 + MIR SINE MIR 20 133 -129 722 196 0 0 chr20 46835195 46835307 -25318575 - MER81 DNA DNA -2 112 1 282 287 26 113 chr20 46835307 46835339 -25318543 + MIR SINE MIR 133 138 -124 1924 157 0 10 chr20 46835339 46835638 -25318244 + AluJb SINE Alu 1 296 -16 282 287 26 113 chr20 46835638 46835694 -25318188 + MIR SINE MIR 138 197 -65 203 252 19 84 chr20 46835810 46835917 -25317965 - MIR SINE MIR -61 201 102 664 320 13 4 chr20 46837043 46837274 -25316608 - L3 LINE CR1 -15 1562 1330 593 278 64 6 chr20 46837459 46837632 -25316250 - MIR SINE MIR -79 183 1 217 360 63 0 chr20 46838247 46838358 -25315524 - L2 LINE L2 -643 2671 2554 1421 258 83 41 chr20 46838437 46838987 -25314895 + MLT1F1 LTR MaLR 1 567 0 204 380 25 19 chr20 46839036 46839194 -25314688 - L2 LINE L2 -819 2495 2337 464 98 6 0 chr20 46839194 46839265 -25314617 - L1PA10 LINE L1 -261 5890 5818 743 99 33 33 chr20 46839265 46839380 -25314502 + L1PA11 LINE L1 6053 6173 -1 300 333 0 0 chr20 46839380 46839485 -25314397 - L2 LINE L2 -985 2329 2225 205 313 30 0 chr20 46839485 46839552 -25314330 - L3 LINE CR1 -255 1322 1254 2460 75 0 0 chr20 46839555 46839849 -25314033 - AluSg SINE Alu 0 310 17 196 323 115 10 chr20 46839865 46839961 -25313921 - L3 LINE CR1 -311 1266 1161 312 215 308 0 chr20 46840026 46840156 -25313726 + MIR SINE MIR 92 261 -1 372 167 158 9 chr20 46840186 46840246 -25313636 - Charlie5 DNA MER1_type 0 2585 2535 1734 98 33 0 chr20 46840246 46840491 -25313391 - L1PB2 LINE L1 -8 6143 5891 372 167 158 9 chr20 46840491 46840544 -25313338 - Charlie5 DNA MER1_type -50 2535 2455 699 110 0 0 chr20 46840548 46840639 -25313243 - AluS SINE Alu -213 100 10 2299 107 0 0 chr20 46840653 46840951 -25312931 - AluSx SINE Alu -14 298 1 405 342 15 10 chr20 46841024 46841226 -25312656 + L1ME LINE L1 5568 5770 -351 345 282 46 23 chr20 46841522 46841653 -25312229 - MIR SINE MIR -27 235 102 3991 247 60 58 chr20 46841756 46843220 -25310662 - L2 LINE L2 -13 3300 1825 2659 92 30 14 chr20 46843717 46844086 -25309796 - THE1C LTR MaLR 0 375 1 212 225 0 0 chr20 46844534 46844574 -25309308 + L2 LINE L2 3217 3256 -16 546 148 0 0 chr20 46844608 46844723 -25309159 + (TGGA)n Simple_repeat Simple_repeat 2 116 0 525 144 0 31 chr20 46845410 46845507 -25308375 - MLT1K LTR MaLR -8 580 487 310 250 0 15 chr20 46845537 46845605 -25308277 - MLT1K LTR MaLR -197 391 325 596 272 65 75 chr20 46847932 46848211 -25305671 - Charlie8 DNA MER1_type -2141 276 1 2246 102 0 0 chr20 46848686 46848981 -25304901 + AluY SINE Alu 1 295 -16 1648 236 11 8 chr20 46849097 46849448 -25304434 - LTR16C LTR ERVL 0 491 140 252 345 60 17 chr20 46850447 46850563 -25303319 + L2 LINE L2 3143 3263 -9 397 311 53 8 chr20 46850603 46850735 -25303147 + MIR SINE MIR 5 142 -120 527 308 66 30 chr20 46850740 46851096 -25302786 - LTR16C LTR ERVL 0 491 97 205 298 77 29 chr20 46851420 46851524 -25302358 - L2 LINE L2 -30 3242 3134 1479 263 20 30 chr20 46851783 46852178 -25301704 - LTR16C LTR ERVL 0 491 101 373 278 87 0 chr20 46852382 46852497 -25301385 + L2 LINE L2 3145 3269 -3 243 185 12 111 chr20 46852492 46852573 -25301309 - L2 LINE L2 -223 3049 2977 * 349 307 121 19 chr20 46852629 46852844 -25301038 - L3 LINE CR1 -151 1426 1190 321 311 160 0 chr20 46852942 46853061 -25300821 + MIR SINE MIR 29 166 -96 468 258 65 5 chr20 46853964 46854105 -25299777 + L1ME LINE L1 5540 5686 -435 2246 91 3 0 chr20 46854322 46854608 -25299274 + AluSg SINE Alu 1 287 -23 393 22 0 0 chr20 46854608 46854654 -25299228 + (GGAA)n Simple_repeat Simple_repeat 3 48 0 1324 204 81 68 chr20 46855047 46855446 -25298436 - MER66A LTR ERV1 0 478 97 609 299 51 5 chr20 46856081 46856278 -25297604 + MLT1H LTR MaLR 20 225 -324 3493 184 223 19 chr20 46856282 46856689 -25297193 + L1MDa LINE L1 934 1257 -5283 213 39 0 0 chr20 46856689 46856715 -25297167 + (CAA)n Simple_repeat Simple_repeat 2 27 0 3493 184 223 19 chr20 46856715 46857331 -25296551 + L1MDa LINE L1 1257 2165 -4375 2075 244 32 47 chr20 46857317 46858086 -25295796 + L1M4 LINE L1 4419 5176 -970 * 3281 182 11 9 chr20 46858082 46858718 -25295164 - L1PA14 LINE L1 -1275 4871 4235 6797 95 8 1 chr20 46858722 46859967 -25293915 + L1PA14 LINE L1 4897 6161 0 393 268 28 49 chr20 46859974 46860116 -25293766 + L1M4 LINE L1 5164 5302 -844 348 159 0 0 chr20 46860118 46860181 -25293701 + L1MD2 LINE L1 6294 6356 -3 1414 241 118 6 chr20 46860189 46860546 -25293336 + MLT1H LTR MaLR 153 549 0 497 95 0 24 chr20 46860692 46860776 -25293106 - L1MA1 LINE L1 -180 6122 6041 1500 60 0 0 chr20 46860776 46860952 -25292930 + L1MA1 LINE L1 6121 6302 0 314 275 108 24 chr20 46862012 46862168 -25291714 - MIR SINE MIR -66 142 19 1220 222 5 0 chr20 46862175 46862391 -25291491 + MER58A DNA MER1_type 4 220 -4 192 324 21 69 chr20 46862476 46862621 -25291261 + MER5A DNA MER1_type 50 187 -2 499 236 73 30 chr20 46862645 46862810 -25291072 + LTR16C LTR ERVL 179 350 -141 1084 256 9 0 chr20 46862879 46863098 -25290784 - MER58A DNA MER1_type 0 224 4 577 178 0 9 chr20 46863135 46863242 -25290640 + LTR16C LTR ERVL 367 472 -19 282 227 21 124 chr20 46863660 46863757 -25290125 - MIR SINE MIR -64 198 112 596 259 80 33 chr20 46865228 46865440 -25288442 - MIR SINE MIR -13 249 28 1007 263 51 33 chr20 46865893 46866224 -25287658 + MLT1J1 LTR MaLR 42 378 -68 764 208 82 0 chr20 46866456 46866615 -25287267 + L1MC4 LINE L1 6459 6630 -1412 * 2305 211 14 54 chr20 46866614 46867203 -25286679 + L1MC4 LINE L1 7478 8042 0 247 169 91 26 chr20 46867206 46867283 -25286599 + MLT1J1 LTR MaLR 365 446 0 380 262 36 0 chr20 46867321 46867405 -25286477 - L2 LINE L2 -1 3312 3226 2326 191 19 22 chr20 46867406 46867867 -25286015 + MER65C LTR ERV1 1 460 -1 373 270 11 0 chr20 46868121 46868210 -25285672 + MER65C-int LTR ERV1 4782 4871 0 2086 207 15 22 chr20 46868210 46868649 -25285233 + MER65C LTR ERV1 1 438 -23 1507 150 0 78 chr20 46868649 46868943 -25284939 - AluSx SINE Alu -3 309 39 2086 207 15 22 chr20 46868943 46868962 -25284920 + MER65C LTR ERV1 438 456 -5 249 288 0 0 chr20 46868969 46869042 -25284840 - L2 LINE L2 -81 3232 3160 2158 147 42 31 chr20 46869681 46870041 -25283841 - THE1B LTR MaLR 0 364 1 920 253 47 12 chr20 46870061 46870318 -25283564 + LTR16C LTR ERVL 188 453 -38 413 298 76 8 chr20 46870906 46871037 -25282845 - L2 LINE L2 -1 3271 3132 1898 208 63 67 chr20 46871044 46871550 -25282332 - MLT1F LTR MaLR -4 538 35 191 286 103 32 chr20 46871566 46871692 -25282190 - L2 LINE L2 -141 3172 3038 * 324 342 0 0 chr20 46871684 46871798 -25282084 + MIR SINE MIR 69 182 -80 2088 100 27 3 chr20 46871817 46872118 -25281764 + L1MA5A LINE L1 5990 6297 0 252 259 19 56 chr20 46872673 46872781 -25281101 + L1ME LINE L1 5463 5566 -555 430 240 102 49 chr20 46873070 46873316 -25280566 + L1ME3 LINE L1 2669 2927 -3219 490 212 0 20 chr20 46873316 46873415 -25280467 + Tigger5 DNA MER2_type 1 97 -2226 879 301 54 0 chr20 46873509 46873768 -25280114 + MLT1J LTR MaLR 3 275 -236 1790 241 101 65 chr20 46873802 46874494 -25279388 + MER21B LTR ERV1 22 738 -125 636 147 0 0 chr20 46874506 46874601 -25279281 + MER81 DNA DNA 5 99 -15 435 291 28 50 chr20 46874620 46874799 -25279083 + MLT1J LTR MaLR 288 462 -49 309 93 0 0 chr20 46875077 46875120 -25278762 - MADE1 DNA Mariner -37 43 1 1884 119 30 3 chr20 46875200 46875495 -25278387 + L1MA8 LINE L1 5853 6155 -136 26 50 0 0 chr20 46875506 46875546 -25278336 + AT_rich Low_complexity Low_complexity 1 40 0 1068 288 109 26 chr20 46876536 46877002 -25276880 + MLT1J LTR MaLR 1 505 -6 252 297 43 47 chr20 46877288 46877520 -25276362 + L1ME3 LINE L1 3337 3567 -2579 544 280 23 101 chr20 46877629 46877886 -25275996 - MLT1I LTR MaLR -26 383 147 31 0 0 0 chr20 46877898 46877929 -25275953 + AT_rich Low_complexity Low_complexity 1 31 0 313 80 40 0 chr20 46877963 46878013 -25275869 + Alu SINE Alu 250 301 0 29 28 0 0 chr20 46878213 46878249 -25275633 + AT_rich Low_complexity Low_complexity 1 36 0 1315 54 0 0 chr20 46878344 46878512 -25275370 - L1PA3 LINE L1 -889 5257 5090 8130 27 2 0 chr20 46878519 46879416 -25274466 + L1PA3 LINE L1 5254 6152 -3 807 296 102 56 chr20 46879420 46880557 -25273325 + L1ME3 LINE L1 3836 5052 -1094 2163 147 19 11 chr20 46880557 46880917 -25272965 + L1MA6 LINE L1 5938 6300 0 807 296 102 56 chr20 46880917 46881178 -25272704 + L1ME3 LINE L1 5052 5299 -847 378 340 47 19 chr20 46881567 46881779 -25272103 + L3 LINE CR1 863 1080 -497 298 274 36 0 chr20 46881783 46881867 -25272015 + L1M4c LINE L1 1379 1465 -4919 313 370 0 9 chr20 46881945 46882053 -25271829 - L2 LINE L2 -2 3270 3164 431 331 29 11 chr20 46882169 46882344 -25271538 - MLT1I LTR MaLR 0 409 232 5093 146 41 13 chr20 46882376 46883631 -25270251 - L1MA4A LINE L1 -1 6155 4936 458 278 40 13 chr20 46883646 46883797 -25270085 - MLT1I LTR MaLR -192 217 63 2453 56 0 0 chr20 46883869 46884181 -25269701 + AluY SINE Alu 1 312 0 2324 121 140 11 chr20 46884209 46884588 -25269294 + MSTA LTR MaLR 1 428 0 959 220 123 36 chr20 46884588 46884947 -25268935 + L1ME3 LINE L1 5666 6055 -107 699 228 0 0 chr20 46884991 46885171 -25268711 + GA-rich Low_complexity Low_complexity 1 180 0 990 135 0 0 chr20 46885187 46885365 -25268517 + (GGGA)n Simple_repeat Simple_repeat 1 178 0 397 373 62 14 chr20 46885426 46885864 -25268018 - L2 LINE L2 -219 3053 2596 233 314 195 18 chr20 46885988 46886157 -25267725 + L3 LINE CR1 1153 1351 -226 230 382 22 0 chr20 46886221 46886310 -25267572 + L3 LINE CR1 1458 1548 -29 3152 153 12 12 chr20 46886564 46887079 -25266803 + MLT2B1 LTR ERVL 6 520 0 720 231 7 0 chr20 46887283 46887430 -25266452 + LTR16A LTR ERVL 301 448 -2 328 350 41 16 chr20 46887489 46887683 -25266199 - LTR16C LTR ERVL -165 326 128 620 233 5 29 chr20 46888692 46888948 -25264934 - LTR16C LTR ERVL 0 491 265 303 244 26 0 chr20 46889055 46889133 -25264749 - LTR33 LTR ERVL -2 519 440 925 164 73 23 chr20 46889137 46889314 -25264568 - MER5A DNA MER1_type -1 188 3 2115 158 28 40 chr20 46889340 46889395 -25264487 + L1MB5 LINE L1 5774 5828 -346 1706 114 153 0 chr20 46889395 46889650 -25264232 + AluSq SINE Alu 3 296 -17 2115 158 28 40 chr20 46889650 46889994 -25263888 + L1MB5 LINE L1 5828 6168 -6 592 259 64 36 chr20 46890151 46890371 -25263511 - LTR33 LTR ERVL -271 250 25 358 209 23 23 chr20 46891839 46891925 -25261957 + L2 LINE L2 3223 3308 -5 236 276 230 0 chr20 46891928 46892015 -25261867 + MIR SINE MIR 37 143 -65 589 231 30 0 chr20 46892459 46892593 -25261289 + MER103 DNA DNA 9 146 -20 245 351 0 0 chr20 46892713 46892807 -25261075 - MIR SINE MIR 0 262 169 182 182 0 0 chr20 46893498 46893531 -25260351 - MIR SINE MIR -167 95 63 317 198 94 21 chr20 46895062 46895158 -25258724 + MIR SINE MIR 79 181 -81 1532 276 48 28 chr20 46895388 46895885 -25257997 + MLT1J LTR MaLR 5 511 0 24 0 0 0 chr20 46896313 46896337 -25257545 + AT_rich Low_complexity Low_complexity 1 24 0 337 226 78 10 chr20 46896565 46896667 -25257215 - MER5B DNA MER1_type -16 162 54 2450 157 38 7 chr20 46896813 46897259 -25256623 - L1MB8 LINE L1 -3 6175 5716 602 247 6 6 chr20 46897349 46897507 -25256375 - MER52A LTR ERV1 0 1755 1598 544 271 13 67 chr20 46897507 46897732 -25256150 - MER52A LTR ERV1 -281 1474 1262 552 194 10 0 chr20 46897736 46897839 -25256043 - LTR28 LTR ERV1 -916 104 1 1364 157 38 22 chr20 46897839 46898106 -25255776 - L1MB8 LINE L1 -462 5722 5452 261 299 51 73 chr20 46898120 46898257 -25255625 + MIR SINE MIR 81 214 -48 1375 179 16 4 chr20 46898420 46898666 -25255216 - MER73 LTR ERVL 0 644 396 * 2982 172 18 4 chr20 46898651 46899144 -25254738 - MER54A LTR ERVL -395 506 7 221 347 64 23 chr20 46899161 46899334 -25254548 + MIR SINE MIR 83 262 0 2369 121 38 3 chr20 46899833 46900206 -25253676 - L1MA5A LINE L1 -3 6294 5909 609 226 155 13 chr20 46900215 46900370 -25253512 - MER5A DNA MER1_type -6 183 7 7223 115 30 9 chr20 46900523 46900924 -25252958 + L1MA3 LINE L1 4912 5303 -1002 2177 107 40 0 chr20 46900924 46901224 -25252658 + AluSp SINE Alu 1 312 -1 7223 115 30 9 chr20 46901224 46902179 -25251703 + L1MA3 LINE L1 5303 6304 -1 630 208 45 0 chr20 46902306 46902460 -25251422 + L1MD1 LINE L1 6081 6241 -1 505 267 30 0 chr20 46902476 46902607 -25251275 + Charlie2 DNA MER1_type 1864 1998 -864 872 230 15 36 chr20 46903051 46903247 -25250635 + MER63A DNA MER1_type 12 203 -7 364 273 86 23 chr20 46903260 46903388 -25250494 - MIR3 SINE MIR -43 165 30 346 252 150 14 chr20 46903641 46903788 -25250094 + MLT1J LTR MaLR 325 491 -20 1570 118 0 0 chr20 46904366 46904570 -25249312 - AluSg/x SINE Alu -17 293 90 306 272 87 11 chr20 46904885 46904977 -25248905 + L1ME4a LINE L1 5552 5650 -471 331 229 253 12 chr20 46904998 46905168 -25248714 + L1ME4a LINE L1 5704 5914 -207 220 315 185 0 chr20 46905370 46905548 -25248334 + L3 LINE CR1 674 884 -693 893 315 52 34 chr20 46905615 46905805 -25248077 + L3 LINE CR1 1091 1276 -301 2332 87 3 0 chr20 46905805 46906094 -25247788 - AluSx SINE Alu -21 291 2 893 315 52 34 chr20 46906094 46906379 -25247503 + L3 LINE CR1 1276 1575 -2 22 0 0 0 chr20 46906481 46906503 -25247379 + AT_rich Low_complexity Low_complexity 1 22 0 186 274 95 12 chr20 46907434 46907518 -25246364 - L2 LINE L2 -14 3258 3168 606 232 56 90 chr20 46907747 46907980 -25245902 - MIR SINE MIR -12 250 26 228 277 60 12 chr20 46908071 46908154 -25245728 + MIR SINE MIR 166 252 -10 2223 109 0 0 chr20 46909240 46909545 -25244337 + AluSg SINE Alu 1 305 0 287 222 16 0 chr20 46910645 46910708 -25243174 - MIR SINE MIR -105 103 40 1774 238 52 35 chr20 46912094 46912158 -25241724 - L1ME3 LINE L1 -1 6563 6502 2107 148 0 0 chr20 46912158 46912455 -25241427 + AluSx SINE Alu 1 297 -15 1774 238 52 35 chr20 46912455 46912967 -25240915 - L1ME3 LINE L1 -62 6502 5981 7625 215 61 36 chr20 46913054 46913293 -25240589 - L1ME3 LINE L1 -3873 2848 2617 2815 178 27 4 chr20 46913293 46913777 -25240105 + LTR42 LTR ERVL 1 495 0 7625 215 61 36 chr20 46913777 46914155 -25239727 - L1ME3 LINE L1 -4104 2617 2250 2045 137 0 16 chr20 46914155 46914470 -25239412 + AluSx SINE Alu 1 310 -2 7625 215 61 36 chr20 46914470 46916485 -25237397 - L1ME3 LINE L1 -4471 2250 18 2110 186 30 61 chr20 46917231 46917429 -25236453 + MSTB LTR MaLR 1 204 -222 2316 84 0 42 chr20 46917429 46917738 -25236144 + AluY SINE Alu 1 296 -15 2110 186 30 61 chr20 46917738 46917754 -25236128 + MSTB LTR MaLR 204 219 -207 3738 44 0 9 chr20 46917754 46918230 -25235652 + L1PA7 LINE L1 5691 6162 0 2110 186 30 61 chr20 46918230 46918453 -25235429 + MSTB LTR MaLR 219 426 0 708 139 48 24 chr20 46918606 46918772 -25235110 + L1MD3 LINE L1 7826 7995 0 26 0 0 0 chr20 46918853 46918879 -25235003 + AT_rich Low_complexity Low_complexity 1 26 0 42867 52 8 0 chr20 46919081 46925181 -25228701 + L1PA5 LINE L1 11 6154 0 324 0 0 0 chr20 46925186 46925222 -25228660 + (TA)n Simple_repeat Simple_repeat 2 37 0 884 245 48 0 chr20 46925222 46925410 -25228472 - MER58A DNA MER1_type -27 197 1 803 180 71 38 chr20 46926506 46926572 -25227310 + MER5A DNA MER1_type 1 63 -126 2114 142 0 3 chr20 46926572 46926883 -25226999 - AluSx SINE Alu -2 310 1 803 180 71 38 chr20 46926883 46926999 -25226883 + MER5A DNA MER1_type 63 189 0 429 195 76 27 chr20 46928483 46928624 -25225258 - MIR SINE MIR -63 145 20 879 200 27 11 chr20 46928670 46928855 -25225027 + MER5A DNA MER1_type 2 189 0 1113 85 30 12 chr20 46929022 46929186 -25224696 + MLT2D LTR ERVL 2 168 -246 11709 178 49 1 chr20 46929186 46931214 -25222668 + ERVL-D LTR ERVL 3634 5757 -7 2452 143 9 62 chr20 46931216 46931651 -25222231 + MLT2D LTR ERVL 3 414 0 235 245 120 74 chr20 46931651 46931867 -25222015 - L3 LINE CR1 -92 1485 1260 251 238 0 12 chr20 46931969 46932053 -25221829 + GA-rich Low_complexity Low_complexity 3 85 0 2533 79 0 0 chr20 46932226 46932530 -25221352 + AluSg SINE Alu 1 304 -6 693 286 0 0 chr20 46932608 46932755 -25221127 - MLT1K LTR MaLR -325 263 117 426 69 0 0 chr20 46932923 46932981 -25220901 + (TA)n Simple_repeat Simple_repeat 1 58 0 225 0 0 0 chr20 46933892 46933917 -25219965 + (TTCA)n Simple_repeat Simple_repeat 1 25 0 278 352 57 0 chr20 46933917 46934022 -25219860 - L2 LINE L2 -13 3300 3190 1830 180 40 0 chr20 46934023 46934351 -25219531 + MER58B DNA MER1_type 1 341 0 626 191 147 7 chr20 46935096 46935232 -25218650 - MER5A DNA MER1_type -34 155 1 259 290 0 0 chr20 46935289 46935358 -25218524 + (ATG)n Simple_repeat Simple_repeat 1 69 0 26 0 0 0 chr20 46936057 46936083 -25217799 + AT_rich Low_complexity Low_complexity 1 26 0 1694 154 3 86 chr20 46936104 46936429 -25217453 + AluSx SINE Alu 1 298 -14 384 250 25 8 chr20 46936555 46936675 -25217207 + MIR SINE MIR 141 262 0 848 316 85 27 chr20 46936748 46937229 -25216653 + LTR33 LTR ERVL 1 509 -12 370 204 172 25 chr20 46937232 46937389 -25216493 - MER119 DNA MER1_type 0 583 404 372 189 67 0 chr20 46937389 46937479 -25216403 + L1MA6 LINE L1 4325 4420 -1726 1329 210 0 4 chr20 46937479 46937731 -25216151 - AluJb SINE Alu -22 290 40 5842 138 36 26 chr20 46937731 46938623 -25215259 + L1MA6 LINE L1 4413 5295 -1005 2484 97 0 0 chr20 46938623 46938932 -25214950 + AluSx SINE Alu 1 309 -3 5842 138 36 26 chr20 46938932 46939883 -25213999 + L1MA6 LINE L1 5295 6286 -14 1536 225 51 34 chr20 46939883 46940227 -25213655 - MER119 DNA MER1_type -163 420 66 7889 21 1 0 chr20 46940227 46941252 -25212630 + L1PA2 LINE L1 5130 6155 0 1536 225 51 34 chr20 46941252 46941320 -25212562 - MER119 DNA MER1_type -517 66 1 342 298 173 12 chr20 46942290 46942458 -25211424 + MIR SINE MIR 46 240 -22 304 267 118 56 chr20 46942548 46942743 -25211139 + MIR SINE MIR 25 231 -31 690 178 7 37 chr20 46943678 46943813 -25210069 - MLT1B LTR MaLR -259 131 1 270 0 0 0 chr20 46944492 46944522 -25209360 + (TG)n Simple_repeat Simple_repeat 2 31 0 534 253 155 21 chr20 46944772 46944966 -25208916 - MIR SINE MIR -27 235 16 368 293 173 18 chr20 46945517 46945858 -25208024 - L2 LINE L2 0 3313 2920 606 249 97 100 chr20 46945861 46946150 -25207732 - MLT1H LTR MaLR 0 549 262 2019 90 0 0 chr20 46946261 46946529 -25207353 - L1PA8 LINE L1 -1 6171 5904 858 80 0 0 chr20 46946529 46946641 -25207241 + L1PA8 LINE L1 5780 5891 -281 421 240 52 0 chr20 46946652 46946748 -25207134 + MER96B DNA MER1_type? 317 417 0 289 370 24 0 chr20 46946777 46946942 -25206940 - L2 LINE L2 -190 3082 2914 686 268 118 0 chr20 46947121 46947341 -25206541 - MIR SINE MIR -5 257 12 1263 248 65 3 chr20 46948194 46948504 -25205378 + LTR16C LTR ERVL 163 491 0 304 278 31 0 chr20 46948505 46948602 -25205280 - MIR SINE MIR -79 129 30 1035 280 48 38 chr20 46948741 46949101 -25204781 + MLT1I LTR MaLR 63 409 0 490 276 31 36 chr20 46949105 46949243 -25204639 + MIR SINE MIR 70 208 -54 1837 97 115 7 chr20 46949243 46949512 -25204370 + AluSg1 SINE Alu 5 302 -7 490 276 31 36 chr20 46949512 46949565 -25204317 + MIR SINE MIR 208 260 -2 687 311 50 5 chr20 46950752 46950974 -25202908 - MIR SINE MIR 0 262 31 1031 252 34 34 chr20 46951097 46951269 -25202613 + LTR16C LTR ERVL 194 368 -123 1922 138 15 56 chr20 46951269 46951660 -25202222 - THE1C LTR MaLR 0 375 1 1031 252 34 34 chr20 46951660 46951785 -25202097 + LTR16C LTR ERVL 367 491 0 413 217 89 12 chr20 46952406 46952479 -25201403 + MIR SINE MIR 89 155 -107 181 306 0 0 chr20 46952479 46952528 -25201354 - L2 LINE L2 -2 3311 3263 413 217 89 12 chr20 46952528 46952588 -25201294 + MIR SINE MIR 155 247 -15 657 142 19 0 chr20 46952590 46952696 -25201186 - L1PA15 LINE L1 -5 6160 6053 227 317 84 21 chr20 46952717 46952859 -25201023 - MIR SINE MIR -64 198 48 1151 194 37 0 chr20 46952956 46953172 -25200710 - MER58A DNA MER1_type 0 224 1 230 340 78 13 chr20 46953195 46953348 -25200534 + MIR SINE MIR 20 182 -80 1235 258 48 36 chr20 46953936 46954378 -25199504 - LTR16A1 LTR ERVL -1 456 10 2067 143 0 0 chr20 46955376 46955669 -25198213 + AluSx SINE Alu 3 295 -17 238 304 11 33 chr20 46955743 46955835 -25198047 - L2 LINE L2 -4 3268 3179 353 226 69 39 chr20 46956132 46956234 -25197648 + L2 LINE L2 3197 3301 -12 912 283 87 30 chr20 46956332 46956700 -25197182 - MLT1J2 LTR MaLR -2 448 60 220 300 0 0 chr20 46957217 46957277 -25196605 - MIR SINE MIR 0 262 203 656 13 0 0 chr20 46957295 46957371 -25196511 + AluYb8 SINE Alu 232 307 -11 208 281 49 0 chr20 46957421 46957503 -25196379 - MIR SINE MIR -63 145 60 334 176 29 29 chr20 46958474 46958499 -25195383 + FRAM SINE Alu 70 94 -208 2009 103 11 4 chr20 46958499 46958770 -25195112 + AluSx SINE Alu 3 275 -37 334 176 29 29 chr20 46958770 46958812 -25195070 + FRAM SINE Alu 93 137 -29 458 138 0 0 chr20 46958812 46958877 -25195005 + AluJ/FRAM SINE Alu 230 294 -18 1655 113 47 106 chr20 46958892 46959212 -25194670 + AluSx SINE Alu 1 301 -11 7160 59 10 0 chr20 46959645 46961263 -25192619 - L1PA5 LINE L1 -2 6152 4524 2186 173 38 42 chr20 46961269 46961772 -25192110 - Charlie4a DNA MER1_type -6 502 2 13866 94 1 12 chr20 46962464 46965210 -25188672 + L1PA8 LINE L1 3413 6171 -1 243 61 0 0 chr20 46965580 46965613 -25188269 + (TTA)n Simple_repeat Simple_repeat 3 35 0 487 295 27 0 chr20 46965834 46965983 -25187899 - MIR SINE MIR -51 211 59 338 303 62 47 chr20 46966033 46966244 -25187638 + L1M4 LINE L1 4943 5156 -990 2405 103 0 0 chr20 46966248 46966560 -25187322 + AluSx SINE Alu 1 312 0 450 261 5 28 chr20 46967003 46967157 -25186725 - LTR16A1 LTR ERVL 0 457 347 4537 213 58 35 chr20 46967157 46968281 -25185601 + L1MB8 LINE L1 3144 4241 -1943 6020 86 50 14 chr20 46968281 46969796 -25184086 + L1PA11 LINE L1 4573 6174 0 4537 213 58 35 chr20 46969796 46970190 -25183692 + L1MB8 LINE L1 4241 5634 -550 2565 152 38 26 chr20 46970346 46970880 -25183002 + L1MB8 LINE L1 5639 6178 0 2002 128 0 0 chr20 46970886 46971159 -25182723 + AluJb SINE Alu 1 273 -39 703 118 35 7 chr20 46971166 46971310 -25182572 + GA-rich Low_complexity Low_complexity 4 151 0 1898 141 35 7 chr20 46971363 46971653 -25182229 + AluSx SINE Alu 1 298 -14 3660 119 19 3 chr20 46972038 46972603 -25181279 + L1PB2 LINE L1 5576 6149 -2 525 253 69 98 chr20 46973129 46973611 -25180271 - L1MC4a LINE L1 -1 6120 5649 22 0 0 0 chr20 46974279 46974301 -25179581 + AT_rich Low_complexity Low_complexity 1 22 0 1816 170 3 13 chr20 46974494 46974794 -25179088 - AluJo SINE Alu -15 297 1 181 300 180 13 chr20 46974804 46974954 -25178928 - L2 LINE L2 -575 2739 2565 1499 197 64 51 chr20 46975173 46975564 -25178318 - MSTD LTR MaLR 0 396 1 1364 290 78 52 chr20 46977639 46978604 -25175278 + L1PA12 LINE L1 12 2073 -5508 244 357 98 8 chr20 46978854 46979098 -25174784 + L1M2 LINE L1 802 1067 -5782 364 320 0 29 chr20 46979303 46979478 -25174404 + L1PA16 LINE L1 395 564 -5640 13701 193 26 25 chr20 46979494 46982347 -25171535 + L1PA16 LINE L1 676 3524 -2699 2452 73 0 19 chr20 46982347 46982664 -25171218 + AluY SINE Alu 1 311 0 13701 193 26 25 chr20 46982664 46983355 -25170527 + L1PA16 LINE L1 3524 4213 -2010 2237 102 3 13 chr20 46983355 46983659 -25170223 + AluSg SINE Alu 1 301 -9 13701 193 26 25 chr20 46983659 46983949 -25169933 + L1PA16 LINE L1 4213 4501 -1722 1856 167 0 7 chr20 46983949 46984236 -25169646 + AluJb SINE Alu 1 285 -27 13701 193 26 25 chr20 46984236 46985928 -25167954 + L1PA16 LINE L1 4501 6213 -10 404 299 14 77 chr20 46986056 46986277 -25167605 + L2 LINE L2 2674 2880 -434 404 211 70 0 chr20 46986405 46986519 -25167363 - MIR SINE MIR -55 207 86 523 181 0 0 chr20 46986716 46986799 -25167083 - MER81 DNA DNA 0 114 32 290 351 0 0 chr20 46987123 46987217 -25166665 + L2 LINE L2 3220 3313 0 557 258 32 16 chr20 46988080 46988270 -25165612 - L2 LINE L2 -1 3312 3120 233 240 13 0 chr20 46988488 46988563 -25165319 + (CA)n Simple_repeat Simple_repeat 1 76 0 184 194 0 0 chr20 46988815 46988851 -25165031 - L3 LINE CR1 -11 1566 1531 180 163 70 23 chr20 46988941 46988984 -25164898 + MIR SINE MIR 100 144 -64 22 70 0 0 chr20 46989142 46989185 -25164697 + AT_rich Low_complexity Low_complexity 1 43 0 1979 180 103 14 chr20 46989192 46989788 -25164094 + L1MC4a LINE L1 7057 7678 -130 235 247 143 85 chr20 46989867 46990126 -25163756 - L1ME4a LINE L1 -89 6032 5759 207 193 34 125 chr20 46990479 46990503 -25163379 + MIR SINE MIR 92 117 -145 2287 202 68 19 chr20 46990503 46991019 -25162863 + MLT1F LTR MaLR 2 542 0 207 193 34 125 chr20 46991019 46991082 -25162800 + MIR SINE MIR 117 171 -91 2272 117 0 0 chr20 46992069 46992369 -25161513 + AluSx SINE Alu 1 300 -12 356 189 12 61 chr20 46992369 46992443 -25161439 - MLT1A1 LTR MaLR -25 365 268 182 260 68 0 chr20 46992482 46992555 -25161327 + MIR SINE MIR 114 191 -71 532 280 21 42 chr20 46992921 46992956 -25160926 - MIR SINE MIR -73 189 155 2875 112 19 2 chr20 46992956 46993383 -25160499 - MER57B LTR ERV1 0 434 1 532 280 21 42 chr20 46993383 46993536 -25160346 - MIR SINE MIR -107 155 5 262 348 44 6 chr20 46993568 46993726 -25160156 + L2 LINE L2 2897 3060 -212 365 235 31 10 chr20 46994080 46994178 -25159704 - HAL1 LINE L1 -1665 842 743 706 198 111 32 chr20 46994216 46994468 -25159414 + ORSL DNA AcHobo 1 272 -3 195 42 0 0 chr20 46994604 46994628 -25159254 + (CA)n Simple_repeat Simple_repeat 1 24 0 4930 61 2 2 chr20 46994774 46995384 -25158498 + L1PA6 LINE L1 5545 6154 0 288 297 118 56 chr20 46995570 46995765 -25158117 - MLT1K LTR MaLR -16 572 366 424 221 0 13 chr20 46996196 46996273 -25157609 + MLT1I LTR MaLR 5 80 -425 350 219 21 42 chr20 46996274 46996370 -25157512 - MIR SINE MIR -96 166 73 2035 153 67 27 chr20 46997536 46997908 -25155974 - MSTD LTR MaLR -9 387 1 748 148 9 0 chr20 46997908 46998023 -25155859 - MSTD-int LTR MaLR 0 1735 1620 2726 237 16 11 chr20 46998038 46998381 -25155501 + L1PA13 LINE L1 1 350 -6437 5276 86 106 1 chr20 46998381 46999128 -25154754 + LTR12 LTR ERV1 1 825 -1 2726 237 16 11 chr20 46999128 46999391 -25154491 + L1PA13 LINE L1 350 610 -6177 313 302 48 0 chr20 46999849 46999995 -25153887 + MIR SINE MIR 41 192 -63 181 316 13 40 chr20 47000325 47000401 -25153481 + MIR3 SINE MIR 5 78 -130 1809 203 18 49 chr20 47000950 47001325 -25152557 + L1ME1 LINE L1 5683 6043 -123 1793 102 149 80 chr20 47001325 47001610 -25152272 + MLT1B LTR MaLR 1 318 -72 2427 94 3 0 chr20 47001610 47001917 -25151965 + AluSx SINE Alu 1 308 -4 1793 102 149 80 chr20 47001917 47001994 -25151888 + MLT1B LTR MaLR 318 388 -2 1809 203 18 49 chr20 47001994 47002071 -25151811 + L1ME1 LINE L1 6043 6121 -45 1129 160 0 55 chr20 47002082 47002282 -25151600 + AluJo SINE Alu 1 189 -123 291 83 0 42 chr20 47002316 47002364 -25151518 + L1MA10 LINE L1 6286 6331 -3 2135 123 0 10 chr20 47002374 47002682 -25151200 + AluSx SINE Alu 1 305 -7 654 231 30 18 chr20 47002908 47003077 -25150805 + MER5B DNA MER1_type 8 178 0 256 302 58 0 chr20 47003847 47003933 -25149949 + L2 LINE L2 3142 3232 -40 705 227 193 42 chr20 47003934 47004317 -25149565 - MLT1L LTR MaLR 0 615 175 482 248 82 95 chr20 47004529 47004823 -25149059 + MLT1I LTR MaLR 120 409 0 341 250 34 11 chr20 47004951 47005039 -25148843 + MIR SINE MIR 91 180 -82 533 343 13 23 chr20 47005051 47005360 -25148522 + L1MC4a LINE L1 5617 5922 -1886 1979 137 3 3 chr20 47005504 47005687 -25148195 - AluSq SINE Alu 0 311 126 753 107 0 0 chr20 47005687 47005809 -25148073 + (TA)n Simple_repeat Simple_repeat 1 122 0 1979 137 3 3 chr20 47005809 47005936 -25147946 - AluSq SINE Alu -184 127 1 30 27 0 0 chr20 47005936 47005973 -25147909 + AT_rich Low_complexity Low_complexity 1 37 0 49 18 0 0 chr20 47005997 47006053 -25147829 + AT_rich Low_complexity Low_complexity 1 56 0 2374 70 0 30 chr20 47006115 47006415 -25147467 + AluY SINE Alu 7 297 -14 1761 180 44 14 chr20 47006909 47007269 -25146613 + MLT1D LTR MaLR 1 371 -134 988 192 65 8 chr20 47007269 47007563 -25146319 + MLT1A1 LTR MaLR 1 365 0 926 151 0 0 chr20 47007563 47007702 -25146180 + MLT1D LTR MaLR 367 505 0 236 213 0 0 chr20 47007781 47007828 -25146054 - MLT1L LTR MaLR -223 392 346 681 216 142 10 chr20 47007983 47008187 -25145695 + MIR SINE MIR 2 232 -30 242 220 0 0 chr20 47008242 47008292 -25145590 - LTR67 LTR ERVL -506 51 2 369 271 34 20 chr20 47008667 47008850 -25145032 - L2 LINE L2 -173 3099 2918 624 277 176 38 chr20 47008976 47009395 -25144487 + L2 LINE L2 2804 3290 -23 1546 236 77 28 chr20 47009395 47009891 -25143991 + MLT2B1 LTR ERVL 1 520 0 624 277 176 38 chr20 47009891 47009919 -25143963 + L2 LINE L2 3290 3313 0 261 284 81 76 chr20 47010551 47010653 -25143229 - MIR SINE MIR -2 260 160 2768 168 8 15 chr20 47010653 47011128 -25142754 + MER70A LTR ERVL 1 472 0 261 284 81 76 chr20 47011128 47011177 -25142705 - MIR SINE MIR -102 160 113 2443 60 0 26 chr20 47011177 47011479 -25142403 + AluY SINE Alu 1 294 -17 261 284 81 76 chr20 47011479 47011523 -25142359 - MIR SINE MIR -149 113 63 375 328 45 0 chr20 47012821 47012955 -25140927 - L2 LINE L2 0 3272 3133 414 0 0 0 chr20 47013106 47013152 -25140730 + (TG)n Simple_repeat Simple_repeat 2 47 0 743 318 102 28 chr20 47013186 47013822 -25140060 - L2 LINE L2 -406 2908 2226 210 158 26 0 chr20 47014001 47014039 -25139843 + GA-rich Low_complexity Low_complexity 1 39 0 1549 266 14 32 chr20 47014189 47014403 -25139479 - L1M3b LINE L1 -4701 1580 1364 2358 92 0 0 chr20 47014403 47014698 -25139184 - AluSg SINE Alu -11 299 5 1549 266 14 32 chr20 47014698 47014979 -25138903 - L1M3b LINE L1 -4917 1364 1094 674 333 41 43 chr20 47015349 47015832 -25138050 - L1M3b LINE L1 -5797 484 3 424 206 38 69 chr20 47015873 47016004 -25137878 + L1MC4a LINE L1 7379 7505 -303 24 0 0 0 chr20 47016004 47016028 -25137854 + AT_rich Low_complexity Low_complexity 1 24 0 234 67 0 0 chr20 47016031 47016061 -25137821 + AluY SINE Alu 1 30 -269 1975 55 0 4 chr20 47016061 47016297 -25137585 + AluY SINE Alu 64 298 -13 2250 101 0 7 chr20 47016307 47016604 -25137278 + AluSx SINE Alu 1 295 -17 1280 214 90 34 chr20 47016628 47017039 -25136843 + L1MC4 LINE L1 7609 8042 0 1141 241 65 106 chr20 47017059 47017762 -25136120 - MER77 LTR ERV1 -4 601 26 1808 125 3 49 chr20 47017769 47018056 -25135826 - AluSq SINE Alu -39 274 1 537 16 0 0 chr20 47018798 47018860 -25135022 + (TTTC)n Simple_repeat Simple_repeat 3 64 0 2276 110 0 3 chr20 47018865 47018894 -25134988 - AluSg SINE Alu -1 309 281 1179 79 11 6 chr20 47018894 47019072 -25134810 + (TTCC)n Simple_repeat Simple_repeat 2 180 0 369 0 0 0 chr20 47019072 47019113 -25134769 + (TTTC)n Simple_repeat Simple_repeat 4 44 0 2276 110 0 3 chr20 47019113 47019392 -25134490 - AluSg SINE Alu -27 283 1 2274 111 0 3 chr20 47019421 47019728 -25134154 + AluSq SINE Alu 1 306 -7 207 0 0 0 chr20 47019767 47019790 -25134092 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1567 164 22 25 chr20 47020127 47020402 -25133480 + AluJo SINE Alu 1 274 -38 274 214 86 0 chr20 47020467 47020537 -25133345 + MER5C DNA MER1_type 1 76 -248 2579 136 36 23 chr20 47020610 47021052 -25132830 - Tigger2 DNA MER2_type -4 2714 2267 491 145 0 0 chr20 47021036 47021105 -25132777 - Tigger2 DNA MER2_type -2649 69 1 * 233 240 248 16 chr20 47021247 47021372 -25132510 - L1MC/D LINE L1 -2030 5778 5625 200 317 125 10 chr20 47021484 47021588 -25132294 - MIR3 SINE MIR -53 155 40 518 338 40 18 chr20 47022032 47022360 -25131522 - L2 LINE L2 -1241 2073 1739 687 276 38 17 chr20 47022598 47022837 -25131045 - MIR SINE MIR 0 262 19 256 299 7 69 chr20 47023141 47023285 -25130597 + MER5A DNA MER1_type 55 189 0 286 215 114 0 chr20 47023347 47023426 -25130456 + MIR SINE MIR 102 189 -73 917 300 71 21 chr20 47023429 47023809 -25130073 - MLT1J LTR MaLR -1 510 112 210 156 0 0 chr20 47023866 47023911 -25129971 + A-rich Low_complexity Low_complexity 1 45 0 2125 140 0 0 chr20 47023923 47024223 -25129659 + AluSx SINE Alu 1 300 -12 753 293 138 17 chr20 47024234 47024640 -25129242 + LTR16B LTR ERVL 8 462 -2 1671 152 45 0 chr20 47024944 47025208 -25128674 + AluJb SINE Alu 19 294 -18 2098 108 3 11 chr20 47025482 47025768 -25128114 + AluSx SINE Alu 15 298 -14 1993 60 48 4 chr20 47025768 47026018 -25127864 + AluY SINE Alu 39 299 -12 198 179 0 0 chr20 47026141 47026180 -25127702 + MIR SINE MIR 219 257 -5 2278 96 26 3 chr20 47026250 47026552 -25127330 + AluSc SINE Alu 1 309 0 323 330 0 0 chr20 47026554 47026648 -25127234 - L2 LINE L2 -15 3298 3205 522 182 0 0 chr20 47026763 47026851 -25127031 + HY4 scRNA scRNA 1 88 -5 186 43 0 0 chr20 47026862 47026885 -25126997 + (TTAAA)n Simple_repeat Simple_repeat 3 25 0 1765 203 62 104 chr20 47027001 47027442 -25126440 - MLT1F LTR MaLR 0 542 129 2101 144 0 0 chr20 47027442 47027747 -25126135 - AluJo SINE Alu -7 305 1 1765 203 62 104 chr20 47027747 47027871 -25126011 - MLT1F LTR MaLR -413 129 1 281 325 80 0 chr20 47028913 47029026 -25124856 - MIR SINE MIR -28 180 58 314 246 0 0 chr20 47029666 47029731 -25124151 - MER3 DNA MER1_type -144 65 1 2102 80 80 3 chr20 47030340 47030628 -25123254 + AluSx SINE Alu 1 310 -2 219 300 42 42 chr20 47030790 47030910 -25122972 - L2 LINE L2 -236 3036 2917 2406 89 7 0 chr20 47031075 47031377 -25122505 + AluSp SINE Alu 1 304 -9 740 310 67 42 chr20 47031406 47031854 -25122028 + L2 LINE L2 2837 3295 -18 2167 97 41 81 chr20 47031966 47032057 -25121825 + MER51B LTR ERV1 1 94 -283 194 0 39 0 chr20 47032057 47032083 -25121799 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1885 95 40 29 chr20 47032083 47032356 -25121526 - AluSx SINE Alu -36 276 1 2167 97 41 81 chr20 47032356 47032656 -25121226 + MER51B LTR ERV1 92 377 0 1142 219 78 100 chr20 47034450 47034875 -25119007 - MER66A LTR ERV1 -10 520 100 604 176 9 9 chr20 47034910 47035018 -25118864 - MER66A-int LTR ERV1 0 6676 6569 * 2288 262 31 16 chr20 47035001 47035888 -25117994 - MER66A-int LTR ERV1 -1579 6177 4608 258 288 0 0 chr20 47035936 47036002 -25117880 + PRIMA41-int LTR ERV1 4556 4621 -3135 641 170 9 0 chr20 47036141 47036247 -25117635 + AluSg/x SINE Alu 185 291 -21 330 132 0 0 chr20 47036247 47036300 -25117582 + (TG)n Simple_repeat Simple_repeat 1 53 0 5163 278 35 34 chr20 47036300 47036599 -25117283 - MER66A-int LTR ERV1 -3162 4594 4297 2265 92 0 26 chr20 47036599 47036903 -25116979 - AluSc SINE Alu -13 296 1 5163 278 35 34 chr20 47036903 47039453 -25114429 - MER66A-int LTR ERV1 -3459 4297 1740 473 230 0 0 chr20 47039453 47039540 -25114342 + AluJ/FLAM SINE Alu 2 88 -224 783 208 71 163 chr20 47039542 47039979 -25113903 - MER66A-int LTR ERV1 -5880 796 400 362 210 80 30 chr20 47039985 47040085 -25113797 - MER66A-int LTR ERV1 -6411 265 161 1126 244 64 28 chr20 47040159 47040519 -25113363 - MER66A LTR ERV1 -9 469 97 563 158 32 21 chr20 47041388 47041483 -25112399 + U6 snRNA snRNA 1 96 -11 566 239 126 20 chr20 47041866 47042159 -25111723 - MER5C DNA MER1_type 0 324 1 914 162 7 0 chr20 47042185 47042333 -25111549 + FRAM SINE Alu 1 146 -30 1967 125 4 7 chr20 47042334 47042635 -25111247 - AluJb SINE Alu 0 301 2 2190 92 0 4 chr20 47042696 47042977 -25110905 + AluY SINE Alu 1 280 -31 15208 30 1 0 chr20 47042977 47045531 -25108351 + L1PA5 LINE L1 3596 6150 -4 2301 98 0 3 chr20 47045996 47046292 -25107590 + AluSx SINE Alu 1 295 -17 1254 265 112 76 chr20 47046329 47047082 -25106800 - L1ME3A LINE L1 -214 5956 5231 922 124 0 0 chr20 47047082 47047211 -25106671 - FLAM_C SINE Alu 0 133 5 1254 265 112 76 chr20 47047211 47047620 -25106262 - L1ME3A LINE L1 -939 5231 4838 2266 115 3 0 chr20 47047620 47047932 -25105950 - AluSp SINE Alu 0 313 1 1254 265 112 76 chr20 47047932 47048104 -25105778 - L1ME3A LINE L1 -1332 4838 4674 2183 104 13 7 chr20 47048104 47048411 -25105471 + AluSx SINE Alu 1 309 -3 1254 265 112 76 chr20 47048411 47048775 -25105107 - L1ME3A LINE L1 -1496 4674 4204 1038 219 0 0 chr20 47048800 47048992 -25104890 + MLT1D LTR MaLR 1 192 -313 956 296 99 16 chr20 47048992 47049479 -25104403 - L1ME3A LINE L1 -1979 4167 3641 1959 259 94 26 chr20 47049525 47050397 -25103485 - HAL1 LINE L1 -290 2217 1287 180 0 0 0 chr20 47050401 47050421 -25103461 + (TG)n Simple_repeat Simple_repeat 1 20 0 336 64 0 0 chr20 47050423 47050470 -25103412 + (GA)n Simple_repeat Simple_repeat 2 48 0 475 306 82 15 chr20 47050731 47050937 -25102945 - L1ME3 LINE L1 -211 5951 5732 2024 241 92 65 chr20 47050967 47051171 -25102711 - HAL1 LINE L1 -1224 1283 1086 848 154 0 0 chr20 47051171 47051314 -25102568 - L1PA16 LINE L1 0 6166 6024 2024 241 92 65 chr20 47051314 47051363 -25102519 - HAL1 LINE L1 -1421 1086 1040 2090 107 11 0 chr20 47051363 47051644 -25102238 - AluSp SINE Alu -29 284 1 2024 241 92 65 chr20 47051644 47052327 -25101555 - HAL1 LINE L1 -1467 1040 321 496 175 23 40 chr20 47052330 47052436 -25101446 - LTR9 LTR ERV1 0 779 509 541 68 8 7 chr20 47052438 47052673 -25101209 + AluY SINE Alu 1 297 -13 2622 167 9 65 chr20 47052673 47053213 -25100669 - LTR9 LTR ERV1 -93 519 10 382 283 29 78 chr20 47053313 47053518 -25100364 - HAL1 LINE L1 -2286 221 27 1652 158 10 30 chr20 47054518 47054821 -25099061 - AluJo SINE Alu -15 297 1 485 307 80 17 chr20 47055127 47055365 -25098517 + LTR16C LTR ERVL 239 491 0 219 167 0 0 chr20 47056524 47056566 -25097316 + (TCTCTG)n Simple_repeat Simple_repeat 2 43 0 229 299 0 13 chr20 47056577 47056654 -25097228 + CT-rich Low_complexity Low_complexity 1 76 0 471 219 44 51 chr20 47056773 47056910 -25096972 - L1ME3 LINE L1 -392 5729 5594 320 250 64 36 chr20 47058180 47058320 -25095562 - MLT1I LTR MaLR -263 146 3 2066 137 3 0 chr20 47058622 47058929 -25094953 - AluSg SINE Alu -2 308 1 770 289 97 4 chr20 47059366 47059704 -25094178 - L1ME4a LINE L1 -296 5825 5460 256 238 69 10 chr20 47059718 47059819 -25094063 + HAL1 LINE L1 1534 1640 -867 301 281 115 81 chr20 47059819 47060146 -25093736 + L1M4 LINE L1 3115 3460 -2686 1661 195 0 13 chr20 47060146 47060454 -25093428 + AluJo SINE Alu 1 304 -8 301 281 115 81 chr20 47060454 47060536 -25093346 + L1M4 LINE L1 3460 3538 -2608 851 283 83 65 chr20 47060667 47061585 -25092297 + L1M4 LINE L1 3730 4663 -1483 1323 230 79 41 chr20 47061605 47062023 -25091859 + MLT1J LTR MaLR 69 502 -9 2361 99 0 0 chr20 47062226 47062528 -25091354 - AluSx SINE Alu -9 303 2 548 299 132 7 chr20 47062633 47062948 -25090934 - L1M2 LINE L1 -463 5658 5352 345 272 132 34 chr20 47062994 47063464 -25090418 - L1ME4a LINE L1 -1515 4631 4116 210 343 15 0 chr20 47063566 47063633 -25090249 + L2 LINE L2 3169 3236 -36 402 301 70 0 chr20 47063659 47063802 -25090080 - L2 LINE L2 -1311 2003 1851 2388 103 0 0 chr20 47064961 47065272 -25088610 - AluSq SINE Alu -2 311 1 1568 259 39 14 chr20 47065297 47065822 -25088060 - L2 LINE L2 -12 3301 2768 1917 263 70 3 chr20 47065836 47066418 -25087464 - L2 LINE L2 -740 2574 1954 485 247 100 71 chr20 47066418 47066657 -25087225 - MLT1J1 LTR MaLR 0 446 201 1337 275 75 5 chr20 47066666 47067051 -25086831 - LTR33 LTR ERVL 0 521 110 790 239 44 6 chr20 47067091 47067309 -25086573 - MLT1J2 LTR MaLR -225 221 2 2126 231 20 58 chr20 47067311 47067446 -25086436 - L2 LINE L2 -1358 1956 1817 1312 161 39 140 chr20 47067446 47067566 -25086316 + AluJb SINE Alu 1 132 -170 324 70 0 0 chr20 47067566 47067609 -25086273 + (TAAAA)n Simple_repeat Simple_repeat 2 44 0 1312 161 39 140 chr20 47067609 47067823 -25086059 + AluJb SINE Alu 132 301 -1 2126 231 20 58 chr20 47067823 47068181 -25085701 - L2 LINE L2 -1497 1817 1494 2386 78 0 37 chr20 47068181 47068502 -25085380 + AluY SINE Alu 1 309 -2 2126 231 20 58 chr20 47068502 47068699 -25085183 - L2 LINE L2 -1820 1494 1291 715 176 209 14 chr20 47069062 47069272 -25084610 - MIR SINE MIR 0 262 12 435 229 85 26 chr20 47069798 47069951 -25083931 - MIR SINE MIR -74 188 27 391 287 17 21 chr20 47070677 47070825 -25083057 - MIR SINE MIR -58 150 17 207 156 0 0 chr20 47071110 47071142 -25082740 + G-rich Low_complexity Low_complexity 1 32 0 333 271 260 0 chr20 47071150 47071327 -25082555 - MIR SINE MIR -14 248 26 929 253 48 74 chr20 47072621 47072686 -25081196 + HAL1 LINE L1 1126 1191 -1316 2118 124 0 3 chr20 47072686 47072977 -25080905 - AluSx SINE Alu -22 290 1 929 253 48 74 chr20 47072977 47073373 -25080509 + HAL1 LINE L1 1191 1575 -932 397 221 5 122 chr20 47073575 47073626 -25080256 - HAL1 LINE L1 -1068 1439 1384 2373 103 0 0 chr20 47073626 47073926 -25079956 + AluSq SINE Alu 1 300 -13 397 221 5 122 chr20 47073926 47074087 -25079795 - HAL1 LINE L1 -1123 1384 1252 616 177 107 60 chr20 47074372 47074587 -25079295 + LTR45B LTR ERV1 265 489 0 2195 246 142 44 chr20 47074636 47075404 -25078478 - HAL1 LINE L1 -1664 843 1 278 276 0 35 chr20 47075436 47075523 -25078359 + MIR SINE MIR 39 122 -140 405 0 0 0 chr20 47075544 47075589 -25078293 + (TTA)n Simple_repeat Simple_repeat 3 47 0 198 189 0 0 chr20 47076573 47076610 -25077272 + L2 LINE L2 2942 2978 -335 278 111 19 0 chr20 47076996 47077029 -25076853 + (TC)n Simple_repeat Simple_repeat 1 37 -18 207 0 0 0 chr20 47077029 47077052 -25076830 + (TG)n Simple_repeat Simple_repeat 2 24 0 278 111 19 0 chr20 47077052 47077072 -25076810 + (TC)n Simple_repeat Simple_repeat 37 55 0 1428 228 91 39 chr20 47078520 47079006 -25074876 - LTR33A LTR ERVL -2 521 11 414 344 75 19 chr20 47080150 47080470 -25073412 + L2 LINE L2 2306 2643 -671 265 294 167 0 chr20 47080498 47080600 -25073282 - L2 LINE L2 -1 3312 3194 1790 115 12 0 chr20 47081152 47081404 -25072478 - THE1B LTR MaLR 0 364 110 1663 154 35 21 chr20 47081425 47081710 -25072172 - AluJo SINE Alu -10 302 14 1577 159 20 30 chr20 47083358 47083654 -25070228 + AluJo SINE Alu 1 293 -19 522 256 96 0 chr20 47084449 47084605 -25069277 + MIR SINE MIR 73 243 -19 327 265 106 7 chr20 47084698 47084849 -25069033 + L1M LINE L1 5255 5420 -2388 357 274 39 73 chr20 47084989 47085271 -25068611 - L1 LINE L1 -776 5370 5113 368 262 42 79 chr20 47085834 47085921 -25067961 - MIR SINE MIR -17 245 156 2139 134 0 3 chr20 47085921 47086226 -25067656 - AluSx SINE Alu -8 304 1 368 262 42 79 chr20 47086226 47086352 -25067530 - MIR SINE MIR -106 156 40 659 268 27 7 chr20 47087043 47087270 -25066612 - MIR SINE MIR -6 256 25 344 351 56 56 chr20 47087797 47088139 -25065743 - L2 LINE L2 -1 3271 2930 2350 98 0 3 chr20 47088309 47088327 -25065555 - AluSq SINE Alu -8 305 288 276 77 0 0 chr20 47088327 47088366 -25065516 + (TATG)n Simple_repeat Simple_repeat 2 40 0 2350 98 0 3 chr20 47088366 47088653 -25065229 - AluSq SINE Alu -25 288 1 1694 195 10 0 chr20 47088655 47088962 -25064920 - AluJo SINE Alu -2 310 1 297 317 12 24 chr20 47089005 47089169 -25064713 + (TCTA)n Simple_repeat Simple_repeat 1 162 0 183 281 0 0 chr20 47089198 47089280 -25064602 + (TCCA)n Simple_repeat Simple_repeat 4 85 0 500 305 11 0 chr20 47089312 47089437 -25064445 + (TTCA)n Simple_repeat Simple_repeat 4 133 -46 2274 176 70 27 chr20 47089437 47089921 -25063961 - MLT1D LTR MaLR 0 505 1 500 305 11 0 chr20 47089921 47089969 -25063913 + (TTCA)n Simple_repeat Simple_repeat 133 179 0 195 188 0 0 chr20 47090021 47090069 -25063813 + (TCTA)n Simple_repeat Simple_repeat 3 50 0 201 323 15 0 chr20 47090083 47090148 -25063734 + (TTCA)n Simple_repeat Simple_repeat 4 69 0 218 235 12 0 chr20 47090182 47090263 -25063619 + (TCCA)n Simple_repeat Simple_repeat 4 85 0 490 140 0 19 chr20 47090338 47090445 -25063437 + (TC)n Simple_repeat Simple_repeat 1 105 0 2270 85 3 0 chr20 47091313 47091616 -25062266 - AluSp SINE Alu 0 304 1 891 165 83 69 chr20 47092229 47092447 -25061435 + AluJo SINE Alu 87 307 -5 335 299 30 71 chr20 47092528 47092585 -25061297 + MER117 DNA MER1_type 5 63 -134 2134 119 0 3 chr20 47092585 47092910 -25060972 + AluSx SINE Alu 1 324 0 335 299 30 71 chr20 47092910 47093048 -25060834 + MER117 DNA MER1_type 63 193 -4 257 234 117 13 chr20 47093067 47093144 -25060738 - L2 LINE L2 -6 3266 3182 808 246 98 81 chr20 47093216 47093531 -25060351 + MLT1J2 LTR MaLR 7 333 -113 2180 109 0 0 chr20 47093531 47093986 -25059896 + AluSx SINE Alu 1 455 0 808 246 98 81 chr20 47093986 47094099 -25059783 + MLT1J2 LTR MaLR 333 443 -3 626 182 61 0 chr20 47094456 47094588 -25059294 - MER5A DNA MER1_type -48 141 2 2388 95 0 7 chr20 47094621 47094927 -25058955 - AluSx SINE Alu -8 304 1 2469 85 0 0 chr20 47094934 47095240 -25058642 - AluSq SINE Alu -6 307 2 2236 176 23 117 chr20 47095271 47095833 -25058049 - MLT2B2 LTR ERVL -6 509 1 347 196 155 0 chr20 47096076 47096173 -25057709 + MIR SINE MIR 114 225 -37 5820 117 13 18 chr20 47096173 47096807 -25057075 + L1PA16 LINE L1 4701 5336 -830 1797 152 53 3 chr20 47096807 47097090 -25056792 + AluJb SINE Alu 1 297 -15 5820 117 13 18 chr20 47097090 47097919 -25055963 + L1PA16 LINE L1 5336 6157 -9 21 0 0 0 chr20 47097919 47097940 -25055942 + AT_rich Low_complexity Low_complexity 1 21 0 2136 133 110 38 chr20 47098271 47098670 -25055212 + MSTA LTR MaLR 1 428 0 2117 224 80 35 chr20 47098839 47099349 -25054533 - MLT1F LTR MaLR -7 535 3 255 93 0 0 chr20 47099574 47099617 -25054265 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 2259 99 0 0 chr20 47099620 47099902 -25053980 - AluSx SINE Alu -30 282 1 406 215 277 15 chr20 47100396 47100504 -25053378 - MIR SINE MIR -2 260 181 2241 121 0 7 chr20 47100504 47100810 -25053072 - AluSx SINE Alu -8 304 1 406 215 277 15 chr20 47100810 47100896 -25052986 - MIR SINE MIR -81 181 15 837 174 0 0 chr20 47101217 47101349 -25052533 + FLAM_C SINE Alu 1 132 -1 313 191 59 15 chr20 47101495 47101563 -25052319 + MARNA DNA Mariner 426 496 -90 548 283 14 7 chr20 47101746 47101884 -25051998 + L2 LINE L2 3134 3272 0 2110 201 27 52 chr20 47101902 47102459 -25051423 + L1MB8 LINE L1 5635 6177 -1 1296 239 111 42 chr20 47102536 47103013 -25050869 + MLT1J LTR MaLR 1 510 -1 2417 73 0 3 chr20 47103016 47103342 -25050540 - AluY SINE Alu 0 311 1 473 273 39 19 chr20 47103379 47103533 -25050349 + MER103 DNA DNA 2 158 -8 284 382 56 6 chr20 47103624 47103802 -25050080 + L2 LINE L2 2657 2843 -471 849 270 73 37 chr20 47104099 47104452 -25049430 - MLT1J2 LTR MaLR -33 376 23 2528 60 0 3 chr20 47105729 47106030 -25047852 + AluY SINE Alu 1 300 -11 580 250 0 0 chr20 47106319 47106447 -25047435 + L2 LINE L2 3185 3312 -1 309 274 78 0 chr20 47107098 47107200 -25046682 + L2 LINE L2 3204 3313 0 215 125 42 21 chr20 47107729 47107777 -25046105 + (CCCCG)n Simple_repeat Simple_repeat 1 49 0 26 30 0 0 chr20 47108197 47108230 -25045652 + GC_rich Low_complexity Low_complexity 1 33 0 210 186 17 17 chr20 47108285 47108344 -25045538 + (CGGG)n Simple_repeat Simple_repeat 1 59 0 233 222 82 15 chr20 47108448 47108583 -25045299 + (CCGGG)n Simple_repeat Simple_repeat 2 145 0 29 47 0 0 chr20 47110207 47110250 -25043632 + AT_rich Low_complexity Low_complexity 1 43 0 212 373 0 0 chr20 47111168 47111243 -25042639 - L2 LINE L2 -12 3260 3186 377 333 9 0 chr20 47111276 47111387 -25042495 - MIR SINE MIR -139 123 12 683 245 133 14 chr20 47114218 47114504 -25039378 + MER5C DNA MER1_type 1 320 -4 634 210 85 62 chr20 47114487 47114543 -25039339 + MER5A DNA MER1_type 10 63 -126 * 2134 109 0 48 chr20 47114543 47114854 -25039028 + AluSx SINE Alu 2 297 -15 634 210 85 62 chr20 47114854 47114973 -25038909 + MER5A DNA MER1_type 63 189 0 922 210 77 5 chr20 47114981 47115176 -25038706 + MER3 DNA MER1_type 1 209 0 2317 64 11 0 chr20 47115680 47116000 -25037882 - AluY SINE Alu 0 323 1 2266 115 3 3 chr20 47116323 47116635 -25037247 + AluSx SINE Alu 1 312 0 193 250 0 0 chr20 47116831 47116875 -25037007 - L3 LINE CR1 -1 1576 1533 758 153 73 0 chr20 47117187 47117311 -25036571 - FLAM_A SINE Alu 0 133 1 231 347 82 14 chr20 47117746 47117893 -25035989 - MIR3 SINE MIR -8 200 44 274 254 0 0 chr20 47118389 47118448 -25035434 - MIR SINE MIR 0 262 204 578 250 44 12 chr20 47118454 47118614 -25035268 + MLT1I LTR MaLR 5 169 -240 195 338 104 104 chr20 47118984 47119262 -25034620 - L2 LINE L2 -3 3269 2992 746 260 41 0 chr20 47119555 47119724 -25034158 + MER5B DNA MER1_type 2 177 -1 2326 94 0 13 chr20 47119790 47119954 -25033928 - AluSg SINE Alu -15 295 135 2355 71 3 14 chr20 47119954 47120250 -25033632 - AluY SINE Alu -18 293 1 2326 94 0 13 chr20 47120250 47120384 -25033498 - AluSg SINE Alu -175 135 1 182 336 146 9 chr20 47120468 47120578 -25033304 + L2 LINE L2 3134 3258 -14 915 239 63 63 chr20 47121195 47121609 -25032273 - L1MC4 LINE L1 0 8042 7629 298 324 176 0 chr20 47122128 47122332 -25031550 + L2 LINE L2 2143 2382 -932 180 0 0 0 chr20 47122592 47122612 -25031270 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 2007 117 0 11 chr20 47122613 47122896 -25030986 - AluSx SINE Alu -32 280 1 256 209 104 117 chr20 47123040 47123119 -25030763 + MER112 DNA MER1_type 23 101 -159 1993 128 38 0 chr20 47123119 47123408 -25030474 - AluSx SINE Alu -11 301 2 256 209 104 117 chr20 47123408 47123491 -25030391 + MER112 DNA MER1_type 101 183 -77 1420 176 115 4 chr20 47123497 47123758 -25030124 + AluJo SINE Alu 1 290 -22 233 188 21 0 chr20 47123758 47123806 -25030076 - L1MB7 LINE L1 -14 6170 6122 727 187 117 35 chr20 47124638 47124809 -25029073 - MIR SINE MIR 0 262 78 323 331 97 39 chr20 47125237 47125391 -25028491 - L2 LINE L2 -125 3147 2985 1067 212 24 38 chr20 47125898 47126186 -25027696 - L1ME3 LINE L1 -27 6135 5852 307 270 252 0 chr20 47126257 47126372 -25027510 - L2 LINE L2 0 3272 3129 1609 171 39 4 chr20 47126372 47126652 -25027230 - LTR10B LTR ERV1 0 547 258 9992 247 19 20 chr20 47126805 47129210 -25024672 - HERVI LTR ERV1 0 6649 4246 5301 224 7 23 chr20 47129213 47130399 -25023483 - HERVI LTR ERV1 -4610 2039 873 2411 228 53 25 chr20 47130404 47131463 -25022419 - HERVI LTR ERV1 -6654 1131 5 1571 172 61 13 chr20 47131463 47131768 -25022114 - LTR10B LTR ERV1 0 547 250 238 157 98 0 chr20 47131843 47131894 -25021988 - LTR10B LTR ERV1 -491 56 1 2093 182 46 0 chr20 47132507 47132880 -25021002 - MLT1B LTR MaLR 0 390 1 2297 100 0 0 chr20 47134361 47134662 -25019220 - AluY SINE Alu -10 301 1 1874 118 0 8 chr20 47134771 47135033 -25018849 - AluSp SINE Alu -15 298 39 339 191 0 0 chr20 47135049 47135117 -25018765 + (TATATG)n Simple_repeat Simple_repeat 5 72 0 14690 43 6 1 chr20 47135119 47137591 -25016291 - L1PA5 LINE L1 -13 6141 3663 233 195 25 110 chr20 47138130 47138248 -25015634 + MLT1J2 LTR MaLR 318 425 -25 6625 255 65 43 chr20 47139189 47139855 -25014027 - L1MCa LINE L1 -1683 4743 4093 5711 100 33 8 chr20 47139855 47140616 -25013266 - LTR17 LTR ERV1 0 780 1 6625 255 65 43 chr20 47140616 47140944 -25012938 - L1MCa LINE L1 -2333 4093 3774 2279 76 13 25 chr20 47140944 47141258 -25012624 - AluSp SINE Alu -3 310 1 6625 255 65 43 chr20 47141258 47143935 -25009947 - L1MCa LINE L1 -2652 3774 775 257 279 107 21 chr20 47144552 47144692 -25009190 + L2 LINE L2 3109 3260 -12 2356 88 0 3 chr20 47144790 47145085 -25008797 - AluSc SINE Alu -15 294 1 864 235 0 28 chr20 47145126 47145305 -25008577 + MIR SINE MIR 14 187 -75 1363 173 79 22 chr20 47145811 47146088 -25007794 - AluJb SINE Alu -7 305 13 199 375 39 19 chr20 47146446 47146550 -25007332 - L2 LINE L2 -693 2621 2516 2183 107 0 10 chr20 47147024 47147324 -25006558 - AluSg SINE Alu -12 298 2 2236 81 0 0 chr20 47147326 47147597 -25006285 - AluSx SINE Alu -6 306 36 757 192 23 0 chr20 47147601 47147731 -25006151 - FLAM_A SINE Alu 0 133 1 1123 124 0 62 chr20 47147757 47147951 -25005931 - AluSq SINE Alu 0 313 132 24 32 0 0 chr20 47148054 47148085 -25005797 + AT_rich Low_complexity Low_complexity 1 31 0 525 284 144 10 chr20 47148493 47148687 -25005195 - MIR SINE MIR -21 241 22 2033 93 42 28 chr20 47149787 47150076 -25003806 - AluSx SINE Alu -19 293 1 2521 99 74 107 chr20 47151107 47151692 -25002190 - MER51A LTR ERV1 0 634 1 272 322 82 7 chr20 47152000 47152146 -25001736 + L3b LINE CR1 1104 1260 -323 248 208 0 14 chr20 47152286 47152358 -25001524 + CT-rich Low_complexity Low_complexity 4 74 0 386 259 12 0 chr20 47153104 47153189 -25000693 - L2 LINE L2 -1 3271 3186 2469 62 0 0 chr20 47153271 47153562 -25000320 + AluY SINE Alu 1 291 -20 292 313 12 0 chr20 47153666 47153746 -25000136 - LTR41 LTR ERVL -183 590 510 830 192 23 17 chr20 47154226 47154403 -24999479 - LTR41 LTR ERVL -595 178 1 815 232 146 19 chr20 47154408 47154675 -24999207 + L1ME3A LINE L1 5861 6161 -9 1655 101 13 0 chr20 47154862 47155090 -24998792 + AluSg/x SINE Alu 73 303 -9 1059 147 95 11 chr20 47156532 47156722 -24997160 + MER2 DNA MER2_type 1 206 -139 35 0 0 0 chr20 47156733 47156768 -24997114 + AT_rich Low_complexity Low_complexity 1 35 0 2980 193 22 0 chr20 47159561 47160069 -24993813 - LTR53 LTR ERVL 0 519 1 238 247 227 53 chr20 47160270 47160420 -24993462 - MER5B DNA MER1_type -1 177 2 * 298 299 107 45 chr20 47160420 47160595 -24993287 + L2 LINE L2 2308 2493 -821 323 368 84 0 chr20 47160788 47160943 -24992939 + MIR3 SINE MIR 21 188 -20 2378 78 10 0 chr20 47161086 47161382 -24992500 + AluSq SINE Alu 1 299 -14 1384 224 73 0 chr20 47161805 47162135 -24991747 - L1ME1 LINE L1 -4 6162 5809 334 248 141 41 chr20 47162366 47162487 -24991395 - MIR3 SINE MIR -67 141 9 220 294 73 0 chr20 47162939 47163007 -24990875 + MIR3 SINE MIR 115 187 -21 225 356 55 0 chr20 47163679 47163752 -24990130 - L2 LINE L2 -37 3235 3159 1884 232 190 50 chr20 47164220 47165253 -24988629 + HAL1 LINE L1 1022 2198 -309 1078 142 28 11 chr20 47165283 47165459 -24988423 + MER58A DNA MER1_type 46 224 0 626 201 47 73 chr20 47165459 47165693 -24988189 + HAL1 LINE L1 2261 2488 -19 277 333 112 54 chr20 47165819 47166077 -24987805 - L2 LINE L2 0 3272 3000 274 322 184 49 chr20 47166153 47166577 -24987305 - L2 LINE L2 -456 2858 2493 282 56 0 0 chr20 47166577 47166613 -24987269 + (TG)n Simple_repeat Simple_repeat 2 37 0 274 322 184 49 chr20 47166613 47167072 -24986810 - L2 LINE L2 -821 2493 1855 294 300 56 0 chr20 47167205 47167295 -24986587 - L2 LINE L2 0 3313 3219 279 0 0 0 chr20 47167301 47167332 -24986550 + (TG)n Simple_repeat Simple_repeat 2 32 0 482 219 123 9 chr20 47167381 47167495 -24986387 - MER6B DNA MER2_type -46 164 38 348 275 12 58 chr20 47167548 47167719 -24986163 - L2 LINE L2 -155 3158 2996 229 57 86 0 chr20 47168595 47168630 -24985252 - L1ME4a LINE L1 -10 6111 6074 251 346 8 0 chr20 47169996 47170126 -24983756 - L1ME1 LINE L1 -459 5662 5532 8829 15 6 286 chr20 47170173 47172109 -24981773 + SVA Other Other 2 1405 0 1910 164 17 0 chr20 47172320 47172612 -24981270 - AluJb SINE Alu -15 297 1 2382 125 31 18 chr20 47172668 47173236 -24980646 - LTR10E LTR ERV1 0 633 1 725 143 0 0 chr20 47173938 47174057 -24979825 - L1MA7 LINE L1 -10 6281 6163 263 278 10 21 chr20 47174694 47174791 -24979091 - HAL1 LINE L1 -182 2325 2230 461 299 48 11 chr20 47176180 47176367 -24977515 + L1ME LINE L1 5626 5819 -302 2154 104 10 7 chr20 47176379 47176667 -24977215 + AluSq SINE Alu 1 289 -24 8145 25 5 0 chr20 47176826 47178013 -24975869 - L1PA4 LINE L1 -3 6152 4964 190 250 120 54 chr20 47179148 47179240 -24974642 + MIR SINE MIR 117 214 -48 22 0 0 0 chr20 47179761 47179783 -24974099 + AT_rich Low_complexity Low_complexity 1 22 0 295 321 195 18 chr20 47181178 47181455 -24972427 + L3 LINE CR1 1125 1450 -127 182 261 65 0 chr20 47181509 47181555 -24972327 + L3 LINE CR1 1508 1556 -21 218 243 58 23 chr20 47181636 47181809 -24972073 + (TATAA)n Simple_repeat Simple_repeat 1 179 0 38 51 0 0 chr20 47181814 47181873 -24972009 + AT_rich Low_complexity Low_complexity 1 59 0 2076 122 7 3 chr20 47182227 47182522 -24971360 - AluSq SINE Alu -17 296 1 468 271 106 24 chr20 47183118 47183288 -24970594 + MIR SINE MIR 1 184 -78 2342 98 0 3 chr20 47183360 47183657 -24970225 - AluSc SINE Alu -13 296 1 2491 66 0 3 chr20 47183768 47184069 -24969813 - AluY SINE Alu -11 300 1 439 312 74 49 chr20 47184706 47184991 -24968891 + L2 LINE L2 1912 2203 -1111 345 192 14 27 chr20 47185166 47185239 -24968643 - Tigger5 DNA MER2_type -1 2322 2251 334 200 0 0 chr20 47185208 47185263 -24968619 - Tigger5 DNA MER2_type -2268 55 1 * 421 299 92 50 chr20 47186383 47186837 -24967045 - L1ME4a LINE L1 -59 6062 5579 5442 148 38 24 chr20 47186837 47187725 -24966157 + MER54A LTR ERVL 1 901 0 421 299 92 50 chr20 47187725 47187825 -24966057 - L1ME4a LINE L1 -542 5579 5485 3129 153 133 41 chr20 47187834 47188100 -24965782 - L1MB7 LINE L1 -23 6161 5921 2202 123 3 0 chr20 47188100 47188410 -24965472 - AluSx SINE Alu -1 311 1 3129 153 133 41 chr20 47188410 47188821 -24965061 - L1MB7 LINE L1 -263 5921 5422 704 260 51 38 chr20 47188413 47188929 -24964953 - L1MC4a LINE L1 -827 5319 5198 * 1339 228 72 12 chr20 47188938 47189258 -24964624 + MER2 DNA MER2_type 7 345 0 232 176 20 0 chr20 47189259 47189310 -24964572 - L1MC4a LINE L1 -951 5195 5144 25 0 0 0 chr20 47190500 47190525 -24963357 + AT_rich Low_complexity Low_complexity 1 25 0 1813 160 0 29 chr20 47190596 47190903 -24962979 - AluJo SINE Alu -14 298 1 411 357 62 26 chr20 47190997 47191224 -24962658 + MIR SINE MIR 22 256 -6 302 107 18 36 chr20 47191615 47191671 -24962211 - L1MB2 LINE L1 -2 6169 6115 207 0 0 0 chr20 47191778 47191801 -24962081 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 689 305 52 11 chr20 47192392 47192661 -24961221 - MARNA DNA Mariner -62 524 245 462 286 0 27 chr20 47192716 47192828 -24961054 + L2 LINE L2 3160 3268 -4 304 319 71 9 chr20 47194131 47194244 -24959638 + L2 LINE L2 3147 3266 -6 189 214 0 0 chr20 47195896 47195938 -24957944 + (TA)n Simple_repeat Simple_repeat 2 43 0 291 243 184 10 chr20 47196993 47197096 -24956786 - MIR SINE MIR -57 151 31 348 243 101 17 chr20 47197280 47197429 -24956453 - MIR3 SINE MIR -65 143 11 24 0 0 0 chr20 47197801 47197825 -24956057 + AT_rich Low_complexity Low_complexity 1 24 0 267 194 0 83 chr20 47197833 47197905 -24955977 - AluSp SINE Alu -121 182 117 231 254 0 32 chr20 47198096 47198159 -24955723 + (CATA)n Simple_repeat Simple_repeat 4 64 0 1707 196 89 24 chr20 47198375 47198747 -24955135 - MSTD LTR MaLR 0 396 1 1878 115 65 4 chr20 47199045 47199324 -24954558 - AluSx SINE Alu -16 296 1 426 280 107 18 chr20 47199497 47199665 -24954217 - MER5A DNA MER1_type -3 186 4 238 300 30 10 chr20 47201741 47201841 -24952041 + HAL1 LINE L1 2228 2329 -178 492 312 116 50 chr20 47203226 47203624 -24950258 - MLT1K LTR MaLR 0 588 165 208 265 15 0 chr20 47203752 47203820 -24950062 + (TA)n Simple_repeat Simple_repeat 1 69 0 335 263 0 0 chr20 47203841 47203917 -24949965 - L1MC4 LINE L1 -145 7897 7822 2953 255 94 75 chr20 47203935 47204105 -24949777 - L1MC4a LINE L1 -552 7256 7091 1788 171 3 19 chr20 47204105 47204421 -24949461 - AluJb SINE Alu -1 311 1 2953 255 94 75 chr20 47204421 47205644 -24948238 - L1MC4a LINE L1 -717 7091 5824 7873 34 12 2 chr20 47205644 47206908 -24946974 - L1PA4 LINE L1 0 6155 4888 2953 255 94 75 chr20 47206908 47207153 -24946729 - L1MC4a LINE L1 -1984 5824 5585 1838 154 0 3 chr20 47207172 47207480 -24946402 - AluJb SINE Alu 0 307 1 208 234 129 31 chr20 47208626 47208762 -24945120 + MIR SINE MIR 33 181 -62 2213 81 18 0 chr20 47209035 47209318 -24944564 - L1PA13 LINE L1 0 6163 5876 655 237 85 59 chr20 47209869 47210006 -24943876 + MIR SINE MIR 15 162 -100 1923 125 13 46 chr20 47210006 47210311 -24943571 + AluSx SINE Alu 1 295 -17 655 237 85 59 chr20 47210311 47210409 -24943473 + MIR SINE MIR 162 256 -6 211 362 53 40 chr20 47210588 47210740 -24943142 - L2 LINE L2 -15 3257 3104 218 346 29 29 chr20 47210869 47210973 -24942909 - L2 LINE L2 -181 3091 2988 188 341 0 44 chr20 47213106 47213197 -24940685 - MIR3 SINE MIR -23 185 99 521 319 74 49 chr20 47213708 47214207 -24939675 + L2 LINE L2 2696 3201 -112 1966 137 17 3 chr20 47214214 47214506 -24939376 + AluSx SINE Alu 1 296 -16 251 307 42 60 chr20 47214776 47214991 -24938891 - L2 LINE L2 -433 2881 2671 227 291 102 26 chr20 47215391 47215468 -24938414 - MIR SINE MIR -62 146 73 180 369 48 60 chr20 47216883 47217135 -24936747 + L2 LINE L2 2943 3191 -81 501 203 17 42 chr20 47219591 47219709 -24934173 - L2 LINE L2 -2 3311 3197 2281 272 109 24 chr20 47219813 47220815 -24933067 - L2 LINE L2 -121 3192 2110 21 0 0 0 chr20 47220825 47220846 -24933036 + AT_rich Low_complexity Low_complexity 1 21 0 243 327 10 20 chr20 47221570 47221769 -24932113 + L1ME3 LINE L1 1336 1532 -5327 1891 167 0 10 chr20 47221775 47222081 -24931801 + AluJb SINE Alu 7 309 -3 458 268 85 23 chr20 47222087 47222340 -24931542 + L1ME3 LINE L1 1659 1929 -5018 2400 115 0 0 chr20 47222372 47222684 -24931198 - AluSx SINE Alu 0 312 1 246 218 102 60 chr20 47222704 47222920 -24930962 + L1ME3 LINE L1 1947 2171 -4786 740 238 120 69 chr20 47222929 47223433 -24930449 + L1ME3 LINE L1 4837 5394 -1563 2065 124 3 0 chr20 47223433 47223755 -24930127 - AluSx SINE Alu 0 323 1 740 238 120 69 chr20 47223755 47224001 -24929881 + L1ME3 LINE L1 5394 5626 -1331 1143 141 104 4 chr20 47224004 47224273 -24929609 + MER33 DNA MER1_type 1 296 -28 760 221 108 29 chr20 47224296 47225210 -24928672 + L1ME3 LINE L1 5898 6964 -9 220 264 69 35 chr20 47225940 47226027 -24927855 + L2 LINE L2 3170 3259 -13 277 346 58 13 chr20 47226615 47226771 -24927111 - MIR SINE MIR -50 212 50 695 203 0 0 chr20 47227504 47227622 -24926260 + FLAM_C SINE Alu 1 118 -15 531 113 0 0 chr20 47227630 47227710 -24926172 + (CA)n Simple_repeat Simple_repeat 2 81 0 520 267 47 17 chr20 47228457 47228629 -24925253 + MER5B DNA MER1_type 1 177 -1 247 260 0 0 chr20 47229859 47229909 -24923973 + L3 LINE CR1 619 668 -909 396 319 148 44 chr20 47230171 47230488 -24923394 + L3 LINE CR1 810 1159 -418 373 308 60 56 chr20 47230508 47230694 -24923188 + MIR SINE MIR 9 198 -64 3302 132 16 39 chr20 47230694 47231310 -24922572 - L1MA9 LINE L1 -2 6310 5709 373 308 60 56 chr20 47231310 47231373 -24922509 + MIR SINE MIR 198 259 -3 315 329 125 7 chr20 47231607 47231759 -24922123 + L3 LINE CR1 1392 1561 -16 463 222 172 21 chr20 47231804 47232005 -24921877 + MIR SINE MIR 33 262 0 556 201 114 13 chr20 47232016 47232165 -24921717 - L1ME3A LINE L1 -5 6165 6002 1945 128 34 14 chr20 47233543 47233840 -24920042 - AluSx SINE Alu -9 303 1 331 378 118 0 chr20 47234235 47234354 -24919528 - L2 LINE L2 -18 3254 3122 183 42 0 0 chr20 47235113 47235137 -24918745 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 240 100 0 0 chr20 47235139 47235179 -24918703 + (TA)n Simple_repeat Simple_repeat 2 41 0 2633 120 67 67 chr20 47235246 47235418 -24918464 + Tigger3(Golem) DNA MER2_type 2480 2651 -378 188 67 33 0 chr20 47235418 47235448 -24918434 + (CTCA)n Simple_repeat Simple_repeat 1 31 0 2633 120 67 67 chr20 47235448 47235518 -24918364 + Tigger3(Golem) DNA MER2_type 2651 2720 -309 814 86 0 9 chr20 47235518 47235634 -24918248 - L1PA10 LINE L1 -2 6166 6052 2249 113 0 0 chr20 47235638 47235948 -24917934 - AluSx SINE Alu -2 310 1 2633 120 67 67 chr20 47235948 47236249 -24917633 + Tigger3(Golem) DNA MER2_type 2722 3029 0 256 210 16 65 chr20 47238386 47238448 -24915434 + L2 LINE L2 3255 3313 0 241 242 91 76 chr20 47240105 47240237 -24913645 + L2 LINE L2 3159 3292 -21 34 24 0 0 chr20 47240479 47240520 -24913362 + AT_rich Low_complexity Low_complexity 1 41 0 1497 135 129 3 chr20 47240527 47240830 -24913052 - L1MA8 LINE L1 -3 6288 5948 348 285 70 41 chr20 47242196 47242381 -24911501 - MIR SINE MIR -67 141 1 30 45 0 0 chr20 47244619 47244663 -24909219 + AT_rich Low_complexity Low_complexity 1 44 0 271 282 86 39 chr20 47244800 47245080 -24908802 - L1ME LINE L1 -510 5611 5319 811 218 51 0 chr20 47245357 47245513 -24908369 - FRAM SINE Alu -13 163 1 2625 247 117 18 chr20 47245608 47246918 -24906964 - HAL1 LINE L1 0 2507 872 1473 251 172 44 chr20 47246914 47248201 -24905681 - L1ME LINE L1 -4651 1429 5 * 372 271 156 91 chr20 47248252 47248592 -24905290 - HAL1 LINE L1 -1688 819 458 635 256 155 32 chr20 47248596 47248944 -24904938 - HAL1 LINE L1 -2112 395 5 1644 179 0 14 chr20 47249209 47249524 -24904358 - AluJo SINE Alu 0 311 1 201 237 0 0 chr20 47249576 47249635 -24904247 + (TA)n Simple_repeat Simple_repeat 2 60 0 210 174 0 0 chr20 47249648 47249694 -24904188 + T-rich Low_complexity Low_complexity 1 46 0 212 382 13 0 chr20 47249770 47249846 -24904036 - L2 LINE L2 -10 3262 3186 209 125 25 0 chr20 47249944 47249984 -24903898 + T-rich Low_complexity Low_complexity 4 44 0 496 213 28 118 chr20 47251133 47251344 -24902538 + MIR SINE MIR 71 262 0 266 68 45 0 chr20 47252712 47252756 -24901126 + T-rich Low_complexity Low_complexity 1 46 0 1478 239 85 38 chr20 47253407 47253985 -24899897 + Charlie7 DNA MER1_type 77 681 -1931 2027 123 0 26 chr20 47254217 47254527 -24899355 - AluSx SINE Alu -10 302 1 2333 75 10 10 chr20 47254644 47254938 -24898944 + AluY SINE Alu 1 294 -17 912 204 28 0 chr20 47255230 47255411 -24898471 + MER58A DNA MER1_type 37 222 -2 1486 146 98 8 chr20 47257488 47257742 -24896140 - AluJb SINE Alu -31 281 5 488 321 119 51 chr20 47257867 47258069 -24895813 - L2 LINE L2 -2 3311 3124 2402 92 0 0 chr20 47258069 47258373 -24895509 + AluSq SINE Alu 1 304 -9 488 321 119 51 chr20 47258373 47258565 -24895317 - L2 LINE L2 -189 3124 2890 538 164 43 35 chr20 47258776 47258892 -24894990 - FLAM_C SINE Alu -26 117 1 225 0 0 0 chr20 47258892 47258917 -24894965 + (T)n Simple_repeat Simple_repeat 1 25 0 426 280 13 27 chr20 47259352 47259502 -24894380 - MLT1J LTR MaLR -65 446 299 228 247 139 38 chr20 47259583 47259741 -24894141 - MLT1J LTR MaLR -333 178 5 442 212 116 50 chr20 47259992 47260190 -24893692 + L1MD3 LINE L1 5712 5922 -1886 2308 97 3 0 chr20 47260258 47260556 -24893326 - AluSg SINE Alu -11 299 1 5268 208 62 35 chr20 47260704 47262207 -24891675 - L1MC4a LINE L1 -17 7791 6248 5583 199 49 82 chr20 47262367 47264022 -24889860 - L1MC4 LINE L1 -55 7987 6388 375 259 39 80 chr20 47264132 47264455 -24889427 + L1MD3 LINE L1 6397 6757 -1101 2577 96 8 3 chr20 47264784 47265137 -24888745 - THE1A LTR MaLR 0 355 1 11164 97 27 1 chr20 47265138 47266678 -24887204 - THE1A-int LTR MaLR -1 1579 1 2529 92 29 3 chr20 47266678 47267024 -24886858 - THE1A LTR MaLR 0 355 1 181 326 32 0 chr20 47267478 47267573 -24886309 + MIR SINE MIR 23 120 -88 456 190 83 41 chr20 47267695 47267816 -24886066 + L1MC5 LINE L1 6719 6844 -1117 539 204 23 102 chr20 47267822 47267998 -24885884 - L1MC4 LINE L1 -1351 6691 6530 617 191 158 102 chr20 47267998 47268446 -24885436 + L1MC5 LINE L1 6840 7405 -556 21 0 0 0 chr20 47268666 47268687 -24885195 + AT_rich Low_complexity Low_complexity 1 21 0 185 316 97 44 chr20 47269543 47269657 -24884225 + L2 LINE L2 3153 3272 0 215 264 83 0 chr20 47271957 47272029 -24881853 + MIR SINE MIR 184 261 -1 189 328 16 16 chr20 47272678 47272742 -24881140 - L3b LINE CR1 -140 1443 1380 188 359 51 34 chr20 47276140 47276257 -24877625 - L3 LINE CR1 -33 1544 1426 181 229 82 0 chr20 47276364 47276425 -24877457 - L3 LINE CR1 -276 1301 1236 587 283 44 10 chr20 47276577 47276782 -24877100 + L1ME3A LINE L1 5950 6161 -9 2427 87 0 3 chr20 47277276 47277575 -24876307 + AluSq SINE Alu 1 298 -15 529 178 271 0 chr20 47277762 47277891 -24875991 - MSTD LTR MaLR 0 396 233 205 333 0 29 chr20 47277899 47277968 -24875914 + L2 LINE L2 3239 3305 -8 208 276 0 69 chr20 47280491 47280578 -24873304 - MER5B DNA MER1_type -97 81 1 496 234 63 58 chr20 47281563 47281768 -24872114 + MIR SINE MIR 36 241 -21 1023 207 30 0 chr20 47282013 47282216 -24871666 + MER3 DNA MER1_type 1 209 0 336 325 97 8 chr20 47282844 47283081 -24870801 + L1M4 LINE L1 2255 2512 -3634 1812 142 3 50 chr20 47284017 47284319 -24869563 - AluJo SINE Alu -22 290 3 328 337 0 11 chr20 47285210 47285302 -24868580 - L2 LINE L2 -39 3233 3143 2292 115 0 0 chr20 47287108 47287403 -24866479 - AluSg SINE Alu -15 295 1 2268 99 0 0 chr20 47287875 47288167 -24865715 - AluSx SINE Alu -16 296 5 357 247 11 0 chr20 47288727 47288820 -24865062 - MER2 DNA MER2_type -145 94 2 1394 107 95 65 chr20 47288844 47289107 -24864775 - MER44D DNA MER2_type -47 562 22 5547 156 27 14 chr20 47289370 47290409 -24863473 - L1MD1 LINE L1 0 6636 5589 623 96 0 0 chr20 47290409 47290492 -24863390 + AluJb SINE Alu 54 136 -176 1061 229 38 35 chr20 47290499 47290856 -24863026 - L1MD1 LINE L1 -1284 5256 4896 1776 165 10 36 chr20 47290856 47291165 -24862717 - AluJo SINE Alu -11 301 1 1061 229 38 35 chr20 47291165 47291179 -24862703 - L1MD1 LINE L1 -1644 4896 4884 * 6501 204 106 38 chr20 47291166 47291810 -24862072 - L1MD1 LINE L1 -3060 3480 2881 2123 118 3 0 chr20 47291810 47292097 -24861785 + AluSx SINE Alu 2 289 -23 6501 204 106 38 chr20 47292097 47294296 -24859586 - L1MD1 LINE L1 -3659 2881 259 2413 92 0 3 chr20 47294296 47294600 -24859282 - AluSq SINE Alu -8 305 3 6501 204 106 38 chr20 47294600 47294878 -24859004 - L1MD1 LINE L1 -6281 259 1 2074 79 98 4 chr20 47295347 47295624 -24858258 + AluSg SINE Alu 1 303 -7 233 258 11 54 chr20 47295810 47295903 -24857979 - MIR SINE MIR -62 146 58 440 322 99 27 chr20 47296678 47297010 -24856872 - L3 LINE CR1 -138 1439 1084 193 220 0 0 chr20 47297005 47297055 -24856827 - MIR3 SINE MIR -3 205 156 * 185 264 0 0 chr20 47297602 47297655 -24856227 - MIR SINE MIR -91 171 119 207 258 107 32 chr20 47297819 47297913 -24855969 - MIR SINE MIR -62 146 47 274 329 0 0 chr20 47298150 47298232 -24855650 - L3 LINE CR1 -634 943 862 874 297 0 0 chr20 47298884 47299113 -24854769 + MIR SINE MIR 6 234 -28 655 218 231 0 chr20 47299307 47299463 -24854419 - MER58C DNA MER1_type -22 193 2 195 69 0 0 chr20 47300661 47300690 -24853192 + (T)n Simple_repeat Simple_repeat 1 29 0 200 273 106 0 chr20 47302314 47302380 -24851502 + MIR3 SINE MIR 131 203 -5 721 201 111 10 chr20 47302438 47302637 -24851245 + HAL1 LINE L1 2250 2468 -39 1335 165 16 44 chr20 47303863 47304112 -24849770 - AluJo SINE Alu -59 253 12 209 171 0 0 chr20 47305436 47305471 -24848411 + GA-rich Low_complexity Low_complexity 2 36 0 1995 115 87 0 chr20 47306894 47307181 -24846701 - AluSx SINE Alu 0 312 1 359 254 45 100 chr20 47307871 47308091 -24845791 + L2 LINE L2 2697 2904 -410 202 277 24 24 chr20 47308250 47308333 -24845549 + L2 LINE L2 3138 3220 -52 193 133 0 0 chr20 47309958 47309988 -24843894 - L2 LINE L2 -1 3271 3242 458 245 166 7 chr20 47310402 47310553 -24843329 - MER5B DNA MER1_type -3 175 1 492 184 184 40 chr20 47310573 47310698 -24843184 + MER5A DNA MER1_type 13 155 -34 301 238 127 16 chr20 47311674 47311800 -24842082 + MIR SINE MIR 35 174 -88 770 277 48 0 chr20 47312015 47312264 -24841618 - MIR SINE MIR 0 262 2 267 332 160 46 chr20 47314527 47314789 -24839093 - L3b LINE CR1 -34 1549 1258 1420 185 73 16 chr20 47315998 47316312 -24837570 - MLT1A1 LTR MaLR -3 362 31 566 259 118 54 chr20 47316585 47316882 -24837000 - L1MC4 LINE L1 -104 7938 7623 231 353 167 0 chr20 47318163 47318313 -24835569 + MIR3 SINE MIR 12 186 -22 31 0 0 0 chr20 47318391 47318422 -24835460 + AT_rich Low_complexity Low_complexity 1 31 0 329 327 28 0 chr20 47318525 47318632 -24835250 + MIR SINE MIR 132 241 -21 237 275 236 39 chr20 47320351 47320529 -24833353 - MIR SINE MIR -3 259 47 2335 89 0 0 chr20 47324611 47324914 -24828968 + AluSx SINE Alu 1 303 -9 332 130 41 84 chr20 47326210 47326317 -24827565 + MIR SINE MIR 99 197 -62 2301 77 7 0 chr20 47326322 47326622 -24827260 - AluSp SINE Alu -7 306 5 256 233 129 17 chr20 47326951 47327067 -24826815 + MER53 DNA DNA 1 129 -60 233 211 165 0 chr20 47326979 47327088 -24826794 - MER53 DNA DNA -22 167 41 * 1684 158 21 14 chr20 47327096 47327387 -24826495 + AluJo SINE Alu 1 293 -19 1282 170 5 5 chr20 47327387 47327611 -24826271 - AluJo SINE Alu -88 224 1 373 138 46 0 chr20 47327611 47327676 -24826206 + MER53 DNA DNA 121 188 -1 567 231 118 32 chr20 47327699 47327885 -24825997 - MIR SINE MIR -13 249 48 220 342 88 9 chr20 47328455 47328569 -24825313 - MIR SINE MIR -120 142 20 1020 194 72 54 chr20 47328638 47328726 -24825156 + MER58B DNA MER1_type 56 141 -2279 2350 66 0 0 chr20 47328726 47329015 -24824867 + AluY SINE Alu 16 304 -7 1020 194 72 54 chr20 47329015 47329205 -24824677 + MER58B DNA MER1_type 141 339 -2 2104 108 0 0 chr20 47329268 47329556 -24824326 + AluSx SINE Alu 1 288 -24 231 36 0 0 chr20 47329569 47329597 -24824285 + (TA)n Simple_repeat Simple_repeat 2 29 0 878 90 0 38 chr20 47329805 47329938 -24823944 - FRAM SINE Alu -1 175 48 204 135 0 0 chr20 47330621 47330658 -24823224 + (GGGA)n Simple_repeat Simple_repeat 3 39 0 2175 114 0 0 chr20 47331554 47331852 -24822030 + AluSx SINE Alu 1 298 -14 221 291 25 0 chr20 47332894 47332973 -24820909 + (CA)n Simple_repeat Simple_repeat 2 82 0 261 0 0 0 chr20 47333075 47333104 -24820778 + (CA)n Simple_repeat Simple_repeat 1 29 0 210 339 61 9 chr20 47333549 47333664 -24820218 + MIR SINE MIR 7 127 -135 1230 186 50 39 chr20 47333692 47333991 -24819891 - AluJo SINE Alu 0 302 1 409 184 136 19 chr20 47334402 47334505 -24819377 - L2 LINE L2 -5 3308 3194 632 156 41 9 chr20 47334760 47334893 -24818989 + THE1B LTR MaLR 179 313 -51 2438 34 0 14 chr20 47334905 47335245 -24818637 + AluY SINE Alu 1 336 0 1778 178 3 0 chr20 47335491 47335783 -24818099 + AluJo SINE Alu 7 299 -13 191 271 0 0 chr20 47335846 47335894 -24817988 - L2 LINE L2 0 3313 3266 366 335 32 19 chr20 47336048 47336203 -24817679 - L2 LINE L2 -219 3053 2897 240 279 137 11 chr20 47336661 47336851 -24817031 - L1P LINE L1 -1075 5071 4858 722 115 0 0 chr20 47337149 47337253 -24816629 + AluSg/x SINE Alu 205 308 -4 351 253 126 21 chr20 47337253 47337348 -24816534 + L1MC4 LINE L1 6615 6719 -1323 306 314 36 44 chr20 47337263 47337365 -24816517 - L1MCa LINE L1 -4362 2064 1962 * 2202 97 3 0 chr20 47337365 47337674 -24816208 + AluY SINE Alu 1 310 -1 306 314 36 44 chr20 47337674 47337708 -24816174 - L1MCa LINE L1 -4464 1962 1929 1726 143 25 0 chr20 47338182 47338462 -24815420 - AluJb SINE Alu -12 300 14 241 148 19 19 chr20 47338479 47338533 -24815349 - LTR49 LTR ERV1 -74 521 468 589 326 37 0 chr20 47338640 47338855 -24815027 + L3 LINE CR1 1218 1440 -137 193 280 149 28 chr20 47339014 47339121 -24814761 - MIR SINE MIR -66 196 77 200 139 83 0 chr20 47339735 47339771 -24814111 - L2 LINE L2 -4 3309 3271 1868 169 0 3 chr20 47340193 47340506 -24813376 + AluJo SINE Alu 1 312 0 2002 113 0 7 chr20 47340527 47340862 -24813020 + AluSx SINE Alu 1 333 0 2266 92 0 0 chr20 47341152 47341446 -24812436 - AluSc SINE Alu -13 296 3 1104 211 20 61 chr20 47341449 47341603 -24812279 - L1ME2 LINE L1 -73 6091 5932 2644 137 5 0 chr20 47341603 47341991 -24811891 + MLT1B LTR MaLR 1 390 0 1104 211 20 61 chr20 47341991 47342178 -24811704 - L1ME2 LINE L1 -232 5932 5764 457 280 155 0 chr20 47342476 47342644 -24811238 + MIR SINE MIR 8 201 -61 1702 158 83 75 chr20 47342652 47342860 -24811022 - THE1B LTR MaLR 0 364 150 2071 126 3 0 chr20 47342860 47343153 -24810729 + AluSg SINE Alu 1 294 -16 1702 158 83 75 chr20 47343153 47343305 -24810577 - THE1B LTR MaLR -214 150 1 2365 73 0 0 chr20 47344230 47344533 -24809349 + AluY SINE Alu 1 303 -8 2271 64 14 0 chr20 47344643 47344959 -24808923 - AluSp SINE Alu 0 320 1 1804 91 20 0 chr20 47345821 47346073 -24807809 + AluSg SINE Alu 39 295 -15 446 300 49 37 chr20 47346214 47346541 -24807341 + HAL1 LINE L1 1208 1538 -969 33 25 0 0 chr20 47347176 47347216 -24806666 + AT_rich Low_complexity Low_complexity 1 40 0 733 137 0 26 chr20 47347216 47347333 -24806549 - AluSq/x SINE Alu -178 134 21 2231 105 3 0 chr20 47347560 47347865 -24806017 - AluSx SINE Alu -6 306 1 2009 133 0 10 chr20 47348300 47348609 -24805273 - AluSx SINE Alu -6 306 1 188 209 0 15 chr20 47349371 47349438 -24804444 + CT-rich Low_complexity Low_complexity 1 66 0 2126 125 0 0 chr20 47349563 47349867 -24804015 - AluSx SINE Alu -8 304 1 181 119 48 0 chr20 47351006 47351048 -24802834 + GA-rich Low_complexity Low_complexity 5 48 0 207 357 10 0 chr20 47352934 47353032 -24800850 + L2 LINE L2 2876 2974 -298 849 215 204 31 chr20 47353193 47353431 -24800451 - LTR16A1 LTR ERVL -2 455 259 2450 126 34 14 chr20 47353431 47353788 -24800094 - THE1B LTR MaLR 0 364 1 849 215 204 31 chr20 47353788 47353931 -24799951 - LTR16A1 LTR ERVL -198 259 8 417 312 8 8 chr20 47354229 47354354 -24799528 - MIR SINE MIR -64 144 20 2184 110 0 0 chr20 47354420 47354719 -24799163 + AluSx SINE Alu 1 299 -13 2007 91 48 45 chr20 47355493 47355802 -24798080 + AluSg SINE Alu 1 310 0 724 188 0 0 chr20 47355832 47355949 -24797933 + FLAM_C SINE Alu 14 130 -13 182 391 0 0 chr20 47356615 47356679 -24797203 + L3 LINE CR1 401 464 -1113 413 92 62 0 chr20 47356763 47356828 -24797054 + U3 snRNA snRNA 1 69 -148 1442 175 73 131 chr20 47357039 47357201 -24796681 + MLT1C LTR MaLR 1 171 -296 1294 194 93 0 chr20 47357201 47357459 -24796423 + AluJb SINE Alu 1 282 -30 2298 90 0 0 chr20 47357461 47357762 -24796120 - AluSq SINE Alu -12 301 1 1442 175 73 131 chr20 47357762 47357792 -24796090 + MLT1C LTR MaLR 172 202 -265 2307 62 0 37 chr20 47357792 47358113 -24795769 + AluY SINE Alu 1 309 -2 1442 175 73 131 chr20 47358113 47358412 -24795470 + MLT1C LTR MaLR 202 467 0 612 339 140 15 chr20 47358595 47358937 -24794945 + L3 LINE CR1 544 928 -649 33 97 0 0 chr20 47359739 47359842 -24794040 + GC_rich Low_complexity Low_complexity 1 103 0 22 0 0 0 chr20 47360014 47360036 -24793846 + GC_rich Low_complexity Low_complexity 1 22 0 2302 85 0 3 chr20 47363037 47363343 -24790539 + AluY SINE Alu 1 305 -6 2317 99 0 6 chr20 47367042 47367356 -24786526 + AluSx SINE Alu 1 312 0 410 307 140 4 chr20 47370070 47370298 -24783584 + L3 LINE CR1 1209 1467 -110 286 248 129 0 chr20 47371036 47371137 -24782745 + MIR SINE MIR 33 146 -62 2159 100 7 0 chr20 47371174 47371475 -24782407 + AluSx SINE Alu 9 311 -1 315 206 113 31 chr20 47373090 47373187 -24780695 + L2 LINE L2 3208 3312 -1 750 192 6 62 chr20 47374746 47374884 -24778998 + MER3 DNA MER1_type 1 128 -34 2299 82 0 3 chr20 47374884 47375178 -24778704 + AluSc SINE Alu 1 293 -16 750 192 6 62 chr20 47375178 47375216 -24778666 + MER3 DNA MER1_type 128 167 -42 338 195 11 11 chr20 47375209 47375233 -24778649 + MER3 DNA MER1_type 123 146 -63 * 1560 112 18 72 chr20 47375233 47375509 -24778373 - AluJo SINE Alu -45 267 7 338 195 11 11 chr20 47375509 47375571 -24778311 + MER3 DNA MER1_type 145 209 0 521 330 173 8 chr20 47375624 47376006 -24777876 + L2 LINE L2 2811 3255 -17 272 68 0 23 chr20 47376908 47376952 -24776930 + (GGAA)n Simple_repeat Simple_repeat 2 44 0 908 142 30 24 chr20 47376982 47377151 -24776731 + L1MB4 LINE L1 6011 6180 0 386 202 58 10 chr20 47377157 47377261 -24776621 + L1ME LINE L1 5328 5436 -728 275 289 24 0 chr20 47377472 47377555 -24776327 - MIR SINE MIR -128 134 50 207 227 30 15 chr20 47378126 47378192 -24775690 + L2 LINE L2 2993 3059 -213 258 219 0 152 chr20 47378511 47378662 -24775220 + L2 LINE L2 2968 3095 -177 267 321 166 14 chr20 47378959 47379320 -24774562 + L2 LINE L2 2855 3270 -43 533 312 73 18 chr20 47379344 47379562 -24774320 - MIR SINE MIR -32 230 1 2176 94 0 0 chr20 47379700 47380020 -24773862 - AluSq SINE Alu 0 320 1 291 298 90 43 chr20 47380045 47380233 -24773649 - MIR SINE MIR -6 256 60 265 310 30 10 chr20 47380843 47380943 -24772939 + MIR SINE MIR 45 146 -62 556 273 6 42 chr20 47381026 47381191 -24772691 - MIR SINE MIR -70 192 34 490 185 66 60 chr20 47382273 47382387 -24771495 + MER5A DNA MER1_type 9 126 -63 1993 153 0 6 chr20 47382387 47382701 -24771181 - AluJb SINE Alu 0 312 1 490 185 66 60 chr20 47382701 47382737 -24771145 + MER5A DNA MER1_type 126 160 -29 1200 147 18 41 chr20 47383286 47383504 -24770378 - MER20 DNA MER1_type -4 215 3 482 230 35 0 chr20 47384191 47384304 -24769578 + MIR SINE MIR 35 151 -111 2163 94 17 0 chr20 47384479 47384777 -24769105 - AluY SINE Alu -7 304 2 272 222 49 49 chr20 47385144 47385225 -24768657 - MIR SINE MIR -67 141 61 263 350 92 18 chr20 47385811 47385974 -24767908 + MIR SINE MIR 20 194 -68 224 314 190 50 chr20 47385989 47386231 -24767651 + L2 LINE L2 3019 3294 -19 271 204 82 61 chr20 47386932 47387030 -24766852 + MIR SINE MIR 97 196 -66 325 236 402 8 chr20 47387033 47387160 -24766722 - MER5B DNA MER1_type -1 177 1 27 0 0 0 chr20 47387223 47387250 -24766632 + AT_rich Low_complexity Low_complexity 1 27 0 1966 110 0 64 chr20 47387354 47387468 -24766414 + AluSx SINE Alu 5 125 -187 2274 98 0 0 chr20 47387468 47387773 -24766109 - AluY SINE Alu -6 305 1 1966 110 0 64 chr20 47387773 47387984 -24765898 + AluSx SINE Alu 125 309 -3 1599 151 0 45 chr20 47388356 47388526 -24765356 - AluJo SINE Alu -6 306 153 2181 118 0 0 chr20 47388526 47388832 -24765050 - AluSg1 SINE Alu -3 306 1 1599 151 0 45 chr20 47388832 47388953 -24764929 - AluJo SINE Alu -159 153 28 915 167 10 56 chr20 47389241 47389439 -24764443 + MER53 DNA DNA 1 189 0 388 272 103 7 chr20 47389709 47389845 -24764037 - MIR SINE MIR -4 258 110 1861 87 0 4 chr20 47389854 47390096 -24763786 - AluSq SINE Alu -72 241 1 2260 92 0 25 chr20 47390104 47390418 -24763464 - AluSx SINE Alu -6 306 1 1104 116 35 81 chr20 47390422 47390620 -24763262 + MER5A DNA MER1_type 1 189 0 1113 151 22 0 chr20 47392259 47392438 -24761444 + MLT1E LTR MaLR 2 184 -409 1783 154 0 33 chr20 47392438 47392743 -24761139 + AluJo SINE Alu 1 295 -17 1934 128 16 16 chr20 47392877 47393182 -24760700 - AluSx SINE Alu -7 305 1 2163 74 0 14 chr20 47393713 47394024 -24759858 - AluY SINE Alu 0 308 2 1707 162 55 0 chr20 47394405 47394695 -24759187 + AluSx SINE Alu 1 306 -6 895 226 12 0 chr20 47395541 47395705 -24758177 + FRAM SINE Alu 1 166 0 501 266 172 51 chr20 47395712 47395996 -24757886 + L2 LINE L2 2940 3271 -42 1791 139 42 0 chr20 47395996 47396283 -24757599 + AluSx SINE Alu 1 299 -13 501 266 172 51 chr20 47396283 47396329 -24757553 + L2 LINE L2 3271 3310 -3 260 380 75 20 chr20 47397238 47397493 -24756389 + L1ME LINE L1 5538 5806 -356 1759 158 13 29 chr20 47397569 47397885 -24755997 + AluJo SINE Alu 1 311 -1 468 181 83 62 chr20 47397912 47397963 -24755919 - L1MA10 LINE L1 -1 6333 6285 2492 39 0 7 chr20 47397963 47398270 -24755612 + AluY SINE Alu 1 305 -6 468 181 83 62 chr20 47398270 47398362 -24755520 - L1MA10 LINE L1 -49 6285 6187 1680 124 75 11 chr20 47398732 47399014 -24754868 + AluJb SINE Alu 1 300 -12 1585 254 92 29 chr20 47399308 47399662 -24754220 - L1ME3A LINE L1 -219 6020 5690 1994 120 3 3 chr20 47399662 47399954 -24753928 + AluSc SINE Alu 3 294 -15 1585 254 92 29 chr20 47399954 47400156 -24753726 - L1ME3A LINE L1 -549 5690 5502 291 28 0 0 chr20 47400156 47400192 -24753690 + (TG)n Simple_repeat Simple_repeat 1 36 0 1585 254 92 29 chr20 47400192 47400408 -24753474 - L1ME3A LINE L1 -737 5502 5301 2298 65 13 7 chr20 47400408 47400714 -24753168 - AluY SINE Alu -3 308 1 1585 254 92 29 chr20 47400714 47400809 -24753073 - L1ME3A LINE L1 -938 5301 5065 226 200 0 0 chr20 47400878 47400923 -24752959 - L2 LINE L2 -3 3310 3266 421 169 0 0 chr20 47400958 47401023 -24752859 - AluJ/FLAM SINE Alu -246 66 2 320 234 19 102 chr20 47401029 47401271 -24752611 - L1ME3A LINE L1 -4062 2334 2112 2089 96 20 3 chr20 47401271 47401563 -24752319 - AluSc SINE Alu -12 297 1 320 234 19 102 chr20 47401563 47401576 -24752306 - L1ME3A LINE L1 -4284 2112 2100 2670 153 23 35 chr20 47401580 47401633 -24752249 - L1MB2 LINE L1 0 6171 6119 2173 117 0 0 chr20 47401633 47401932 -24751950 - AluSx SINE Alu -13 299 1 2670 153 23 35 chr20 47401932 47402394 -24751488 - L1MB2 LINE L1 -52 6119 5662 3238 132 78 40 chr20 47402472 47403023 -24750859 + Tigger3b DNA MER2_type 27 606 -2422 1904 131 0 0 chr20 47403023 47403297 -24750585 + AluSx SINE Alu 39 312 0 3238 132 78 40 chr20 47403297 47403372 -24750510 + Tigger3b DNA MER2_type 606 677 -554 839 168 15 0 chr20 47403372 47403503 -24750379 + AluJb SINE Alu 164 296 -16 2988 130 12 52 chr20 47403503 47403615 -24750267 + Tigger3b DNA MER2_type 665 780 -2248 1682 188 3 10 chr20 47403615 47403929 -24749953 - AluJo SINE Alu 0 312 1 2988 130 12 52 chr20 47403929 47403967 -24749915 + Tigger3b DNA MER2_type 780 818 -2210 1875 153 0 3 chr20 47403967 47404261 -24749621 + AluSx SINE Alu 1 293 -19 2988 130 12 52 chr20 47404261 47404700 -24749182 + Tigger3b DNA MER2_type 818 1231 0 428 189 0 22 chr20 47404701 47404791 -24749091 - MLT1I LTR MaLR -269 140 53 2198 120 0 0 chr20 47404858 47405166 -24748716 + AluSx SINE Alu 1 308 -4 2146 113 3 0 chr20 47406209 47406511 -24747371 - AluSq SINE Alu -10 303 1 204 216 20 0 chr20 47406595 47406646 -24747236 + L2 LINE L2 3261 3312 -1 827 269 159 29 chr20 47406679 47407120 -24746762 - L2 LINE L2 -2 3311 2788 943 174 0 0 chr20 47407140 47407301 -24746581 + AluJb SINE Alu 123 283 -29 987 236 228 8 chr20 47407334 47407702 -24746180 - L2 LINE L2 -534 2780 2332 245 352 56 23 chr20 47407785 47408001 -24745881 - MIR SINE MIR -25 237 15 309 244 0 0 chr20 47408704 47408790 -24745092 + (CCGAG)n Simple_repeat Simple_repeat 1 86 0 38 112 0 0 chr20 47408835 47409013 -24744869 + GC_rich Low_complexity Low_complexity 1 178 0 217 132 0 0 chr20 47410426 47410464 -24743418 + (TTTTTG)n Simple_repeat Simple_repeat 2 39 0 336 252 120 39 chr20 47410541 47410775 -24743107 - L1ME4a LINE L1 -11 6110 5858 1018 239 167 24 chr20 47410818 47410999 -24742883 + L2 LINE L2 2691 2845 -468 1911 88 0 42 chr20 47410999 47411283 -24742599 + AluSg SINE Alu 15 286 -24 1018 239 167 24 chr20 47411283 47411626 -24742256 + L2 LINE L2 2845 3312 -1 23 33 0 0 chr20 47412146 47412176 -24741706 + AT_rich Low_complexity Low_complexity 1 30 0 2492 53 3 0 chr20 47412582 47412884 -24740998 + AluY SINE Alu 1 303 -8 880 302 113 50 chr20 47413046 47413920 -24739962 + L2 LINE L2 2151 3134 -179 639 167 0 9 chr20 47413928 47414036 -24739846 - LTR12 LTR ERV1 -127 587 481 297 258 11 0 chr20 47414038 47414127 -24739755 - LTR30 LTR ERV1 -80 642 553 1254 146 29 54 chr20 47414128 47414367 -24739515 - LTR12 LTR ERV1 -429 285 53 246 173 0 58 chr20 47414367 47414419 -24739463 - LTR30 LTR ERV1 -670 52 4 285 273 85 62 chr20 47414420 47414596 -24739286 + L2 LINE L2 3126 3305 -8 406 325 43 55 chr20 47414604 47414859 -24739023 - MIR SINE MIR -2 260 9 439 258 97 7 chr20 47415047 47415202 -24738680 + MIR SINE MIR 40 208 -54 2554 65 0 3 chr20 47415370 47415676 -24738206 + AluSc SINE Alu 1 305 -4 491 298 218 37 chr20 47416079 47416858 -24737024 - L2 LINE L2 -1907 1407 488 264 267 74 52 chr20 47416966 47417101 -24736781 - MER5A DNA MER1_type -2 187 50 * 329 290 26 71 chr20 47416983 47417138 -24736744 + MER5A DNA MER1_type 36 183 -6 226 255 0 0 chr20 47417147 47417194 -24736688 + MIR SINE MIR 12 58 -204 375 248 111 43 chr20 47419847 47419964 -24733918 - L2 LINE L2 -1 3271 3147 196 352 0 0 chr20 47420022 47420076 -24733806 + MIR SINE MIR 45 98 -110 2506 55 0 0 chr20 47420660 47420975 -24732907 - AluY SINE Alu 0 315 1 1582 143 108 0 chr20 47420981 47421240 -24732642 - AluJo SINE Alu -25 287 1 274 274 170 0 chr20 47421634 47421740 -24732142 - L2 LINE L2 -7 3265 3142 619 157 37 0 chr20 47421741 47421849 -24732033 + MLT2C2 LTR ERVL 299 410 -54 248 146 0 0 chr20 47421914 47421955 -24731927 + MLT2C1 LTR ERVL 357 397 0 702 323 86 59 chr20 47422024 47423067 -24730815 - L2 LINE L2 -961 2353 1283 359 291 51 8 chr20 47423278 47423395 -24730487 + MIR SINE MIR 36 157 -105 504 213 47 40 chr20 47423561 47423816 -24730066 - MLT1J1 LTR MaLR 0 446 154 285 287 102 24 chr20 47424150 47424279 -24729603 - MIR SINE MIR -67 141 23 2830 16 0 0 chr20 47424395 47424705 -24729177 - AluYa5 SINE Alu -1 310 1 682 332 47 16 chr20 47424910 47425274 -24728608 - L2 LINE L2 -348 2966 2592 183 214 24 24 chr20 47425274 47425316 -24728566 - L2 LINE L2 -1038 2276 2235 207 277 100 58 chr20 47425599 47425859 -24728023 + L2 LINE L2 2812 3082 -190 2165 118 0 32 chr20 47426584 47426898 -24726984 - AluSx SINE Alu -8 304 1 200 233 44 56 chr20 47427620 47427710 -24726172 - L3 LINE CR1 -300 1277 1189 356 322 44 44 chr20 47428068 47428248 -24725634 - MIR SINE MIR -1 261 82 24 0 0 0 chr20 47428378 47428402 -24725480 + AT_rich Low_complexity Low_complexity 1 24 0 985 263 93 57 chr20 47429372 47429847 -24724035 - LTR33 LTR ERVL -2 519 28 200 264 42 42 chr20 47429973 47430045 -24723837 - MIR SINE MIR -79 183 112 333 0 0 0 chr20 47430208 47430245 -24723637 + (T)n Simple_repeat Simple_repeat 1 37 0 2270 43 60 7 chr20 47430612 47430893 -24722989 - AluY SINE Alu -15 296 1 25 0 0 0 chr20 47431158 47431183 -24722699 + AT_rich Low_complexity Low_complexity 1 25 0 1669 161 46 18 chr20 47431477 47431757 -24722125 + AluSx SINE Alu 1 288 -24 2097 125 0 3 chr20 47431815 47432102 -24721780 + AluSx SINE Alu 1 286 -26 454 289 16 16 chr20 47432534 47432662 -24721220 + L2 LINE L2 3181 3308 -5 429 318 51 35 chr20 47432671 47432926 -24720956 - L3 LINE CR1 -305 1272 1014 180 316 0 0 chr20 47432951 47433008 -24720874 - L3 LINE CR1 -672 905 849 428 318 91 7 chr20 47433009 47433156 -24720726 - L3 LINE CR1 -857 720 561 384 266 158 32 chr20 47433156 47433314 -24720568 - MER5A DNA MER1_type -3 186 9 217 241 17 17 chr20 47433566 47433624 -24720258 - L3 LINE CR1 -835 742 685 858 164 0 8 chr20 47434447 47434581 -24719301 - FLAM_A SINE Alu 0 133 1 351 214 51 34 chr20 47434598 47434715 -24719167 - L1MC5 LINE L1 -268 7693 7575 230 253 138 11 chr20 47434786 47434873 -24719009 - L1MC4 LINE L1 -1339 6703 6606 395 247 0 0 chr20 47435329 47435402 -24718480 + MIR SINE MIR 41 113 -149 455 238 41 48 chr20 47435745 47435892 -24717990 + MIR SINE MIR 46 191 -71 2104 148 3 0 chr20 47435901 47436211 -24717671 + 7SLRNA srpRNA srpRNA 2 312 -8 202 229 0 0 chr20 47436270 47436305 -24717577 + L2 LINE L2 3258 3292 -21 278 257 147 9 chr20 47436399 47436508 -24717374 - MARNA DNA Mariner -18 568 445 329 310 26 17 chr20 47436618 47436734 -24717148 - L2 LINE L2 -9 3304 3188 1653 155 13 43 chr20 47437178 47437482 -24716400 + AluJo SINE Alu 2 296 -16 368 270 63 9 chr20 47438017 47438128 -24715754 - L2 LINE L2 0 3313 3197 1729 179 27 3 chr20 47438158 47438454 -24715428 + AluJb SINE Alu 1 303 -9 1521 234 89 56 chr20 47438576 47439093 -24714789 - MLT1F LTR MaLR -8 534 1 703 278 46 60 chr20 47439109 47439393 -24714489 - L2 LINE L2 -150 3163 2884 1671 166 83 12 chr20 47439395 47439733 -24714149 - THE1C LTR MaLR 0 375 14 531 179 55 48 chr20 47439759 47439904 -24713978 - L2 LINE L2 -441 2873 2728 264 241 114 0 chr20 47440003 47440082 -24713800 + HAL1b LINE L1 417 504 -844 729 262 47 19 chr20 47440526 47440740 -24713142 - MIR SINE MIR 0 262 43 439 331 58 0 chr20 47440937 47441091 -24712791 - MIR3 SINE MIR -10 198 36 225 275 74 137 chr20 47441257 47441704 -24712178 - L2 LINE L2 -85 3228 2810 376 273 141 21 chr20 47441991 47442233 -24711649 - L2 LINE L2 -904 2410 2140 2375 82 3 0 chr20 47442708 47443001 -24710881 - AluY SINE Alu -17 294 1 1993 150 3 3 chr20 47443269 47443575 -24710307 + AluSx SINE Alu 1 306 -6 2058 122 14 3 chr20 47443820 47444116 -24709766 + AluSg SINE Alu 1 299 -11 995 307 136 11 chr20 47444353 47444816 -24709066 + L2 LINE L2 2394 2914 -400 502 298 88 59 chr20 47445067 47445661 -24708221 - HAL1 LINE L1 -741 1766 1156 1048 82 0 8 chr20 47445761 47445895 -24707987 + AluSq/x SINE Alu 1 133 -180 594 226 26 45 chr20 47446072 47446227 -24707655 - MER5B DNA MER1_type -21 157 6 22 35 0 0 chr20 47446822 47446851 -24707031 + AT_rich Low_complexity Low_complexity 1 29 0 595 296 70 5 chr20 47447176 47447389 -24706493 + L1ME LINE L1 5473 5699 -422 2282 86 0 16 chr20 47447403 47447707 -24706175 + AluY SINE Alu 3 301 -10 286 192 68 0 chr20 47447866 47447939 -24705943 + L1M LINE L1 5345 5422 -2386 1856 161 3 3 chr20 47448118 47448416 -24705466 - AluSx SINE Alu -14 298 1 2624 50 0 0 chr20 47448587 47448888 -24704994 + AluY SINE Alu 1 301 -10 1141 219 107 43 chr20 47449145 47449164 -24704718 - L1ME2 LINE L1 -49 6115 6099 760 215 0 0 chr20 47449164 47449294 -24704588 - FLAM_A SINE Alu -2 131 2 1141 219 107 43 chr20 47449294 47449648 -24704234 - L1ME2 LINE L1 -65 6099 5718 26 0 0 0 chr20 47450546 47450572 -24703310 + AT_rich Low_complexity Low_complexity 1 26 0 2292 102 0 7 chr20 47451301 47451604 -24702278 - AluSq SINE Alu -12 301 1 4438 180 56 15 chr20 47452499 47453930 -24699952 + L1MB5 LINE L1 4502 6009 -165 189 0 0 0 chr20 47453930 47453951 -24699931 + (GGA)n Simple_repeat Simple_repeat 1 21 0 4438 180 56 15 chr20 47453951 47454125 -24699757 + L1MB5 LINE L1 6009 6174 0 2361 81 3 0 chr20 47455160 47455456 -24698426 + AluSc SINE Alu 1 297 -12 541 158 10 30 chr20 47455456 47455546 -24698336 - AluJo SINE Alu -186 126 37 2438 77 0 3 chr20 47455785 47456084 -24697798 - AluY SINE Alu -13 298 1 2129 81 53 0 chr20 47456084 47456368 -24697514 - AluSg SINE Alu -11 299 1 357 291 142 0 chr20 47456384 47456532 -24697350 + MIR SINE MIR 89 257 -5 988 272 104 53 chr20 47458588 47459040 -24694842 + L2 LINE L2 2839 3313 0 2111 106 30 13 chr20 47459330 47459633 -24694249 + AluSx SINE Alu 1 308 -4 2523 63 0 0 chr20 47459633 47459934 -24693948 + AluY SINE Alu 1 301 -10 698 232 24 0 chr20 47460752 47460916 -24692966 - MER5B DNA MER1_type -7 171 4 318 361 59 31 chr20 47460916 47460976 -24692906 - L1M4 LINE L1 -1813 4333 4276 2393 87 3 0 chr20 47460976 47461276 -24692606 + AluSp SINE Alu 1 301 -12 318 361 59 31 chr20 47461276 47461636 -24692246 - L1M4 LINE L1 -1870 4276 3901 1991 85 7 65 chr20 47461899 47462192 -24691690 - AluSp SINE Alu -11 302 27 939 106 8 0 chr20 47462219 47462351 -24691531 - AluSq/x SINE Alu -180 133 1 312 233 302 26 chr20 47462356 47462588 -24691294 - L1M4 LINE L1 -2659 3487 3192 21 57 0 0 chr20 47462740 47462775 -24691107 + AT_rich Low_complexity Low_complexity 1 35 0 2179 106 0 13 chr20 47462779 47463082 -24690800 + AluSx SINE Alu 1 299 -13 244 298 77 29 chr20 47463737 47463841 -24690041 - L2 LINE L2 0 3272 3164 192 77 0 0 chr20 47463913 47463939 -24689943 + (GA)n Simple_repeat Simple_repeat 2 27 0 627 340 95 44 chr20 47464083 47464769 -24689113 - L2 LINE L2 -457 2857 2137 23 0 0 0 chr20 47465215 47465238 -24688644 + AT_rich Low_complexity Low_complexity 1 23 0 1063 208 24 5 chr20 47465536 47465748 -24688134 + MIR SINE MIR 1 216 -46 288 219 172 23 chr20 47466151 47466279 -24687603 - L1M4 LINE L1 -1922 4224 4078 261 253 78 45 chr20 47466617 47466771 -24687111 - L1ME4a LINE L1 -17 6104 5946 218 217 22 0 chr20 47466795 47466841 -24687041 + CT-rich Low_complexity Low_complexity 2 48 0 576 287 135 0 chr20 47466881 47467118 -24686764 - L1MC4a LINE L1 -1928 5880 5612 226 236 194 14 chr20 47467275 47467347 -24686535 - MIR SINE MIR -144 118 34 2675 231 28 5 chr20 47467650 47468260 -24685622 + L1MC4a LINE L1 7182 7805 -3 2097 101 21 0 chr20 47468278 47468566 -24685316 + AluSq SINE Alu 1 294 -19 2241 103 0 3 chr20 47468567 47468878 -24685004 + AluSg SINE Alu 1 310 0 1197 144 64 0 chr20 47469451 47469653 -24684229 + L1PB4 LINE L1 5909 6123 -33 485 313 9 0 chr20 47470136 47470251 -24683631 - L2 LINE L2 -2 3270 3155 2323 66 0 0 chr20 47471028 47471316 -24682566 + AluY SINE Alu 2 289 -22 233 321 111 45 chr20 47471457 47471700 -24682182 + L2 LINE L2 3008 3266 -47 746 245 55 70 chr20 47471706 47471963 -24681919 - MIR SINE MIR -8 254 2 681 219 70 43 chr20 47472013 47472200 -24681682 - MIR SINE MIR 0 262 71 843 126 0 0 chr20 47472356 47472475 -24681407 - FLAM_C SINE Alu -24 119 1 225 263 42 34 chr20 47472533 47472651 -24681231 - L1MC5 LINE L1 -37 7924 7806 466 191 82 77 chr20 47472783 47472977 -24680905 - L1ME2 LINE L1 -42 6122 5928 183 254 439 0 chr20 47473090 47473220 -24680662 - MIR SINE MIR -56 206 20 21 0 0 0 chr20 47474624 47474645 -24679237 + AT_rich Low_complexity Low_complexity 1 21 0 1284 195 109 11 chr20 47474773 47475155 -24678727 - L1MDa LINE L1 -3893 2322 1929 252 289 72 0 chr20 47475216 47475299 -24678583 - L1MC5 LINE L1 -28 7933 7845 1838 138 11 3 chr20 47475793 47476076 -24677806 - AluSx SINE Alu -27 285 1 241 273 11 23 chr20 47476076 47476164 -24677718 - L1P3 LINE L1 -387 5767 5681 939 260 99 81 chr20 47476285 47477173 -24676709 - L1M4 LINE L1 -1087 5059 4156 327 271 68 17 chr20 47477294 47477412 -24676470 - L1MDa LINE L1 -4643 1753 1630 811 294 91 71 chr20 47477510 47478057 -24675825 - L1MDa LINE L1 -4888 1317 760 202 290 0 0 chr20 47478062 47478124 -24675758 + T-rich Low_complexity Low_complexity 2 63 0 405 131 66 0 chr20 47478209 47478270 -24675612 - AluJ/FLAM SINE Alu -246 66 2 1348 188 67 45 chr20 47479622 47480285 -24673597 + L1ME2 LINE L1 5001 5882 -282 1821 135 14 7 chr20 47480285 47480581 -24673301 + AluSx SINE Alu 1 298 -14 1348 188 67 45 chr20 47480581 47480715 -24673167 + L1ME2 LINE L1 5882 6012 -152 274 147 53 7 chr20 47481884 47481946 -24671936 - Alu SINE Alu -6 296 246 832 152 0 28 chr20 47482853 47482998 -24670884 - AluSg/x SINE Alu -37 273 133 449 327 33 14 chr20 47483286 47483500 -24670382 + MER112 DNA MER1_type 43 260 0 196 226 0 81 chr20 47483673 47483735 -24670147 + L3b LINE CR1 1293 1349 -234 1965 69 46 56 chr20 47483877 47484181 -24669701 + AluY SINE Alu 1 301 -10 196 314 70 23 chr20 47484471 47484557 -24669325 - L2 LINE L2 -1 3271 3182 936 170 0 29 chr20 47484560 47484731 -24669151 + FAM SINE Alu 1 41 -8 408 168 99 0 chr20 47485212 47485313 -24668569 + L1MC4 LINE L1 7739 7849 -193 334 208 80 40 chr20 47485477 47485602 -24668280 + L1MC4 LINE L1 7907 8036 -6 1263 174 107 0 chr20 47486098 47486351 -24667531 + AluJb SINE Alu 1 280 -32 1378 186 71 4 chr20 47487352 47487621 -24666261 + AluJo SINE Alu 1 287 -25 2463 36 10 3 chr20 47487662 47487966 -24665916 - AluY SINE Alu -5 306 1 319 149 0 0 chr20 47488062 47488109 -24665773 + Charlie4a DNA MER1_type 120 166 -342 232 310 40 30 chr20 47489062 47489162 -24664720 - L2 LINE L2 -5 3267 3167 1034 186 131 34 chr20 47489323 47489614 -24664268 - Charlie4a DNA MER1_type -98 410 92 805 179 0 0 chr20 47489614 47489748 -24664134 + AluJo SINE Alu 1 134 -178 225 191 169 34 chr20 47489757 47489846 -24664036 - Charlie4a DNA MER1_type -402 106 6 2334 55 0 3 chr20 47491032 47491321 -24662561 - AluY SINE Alu -21 290 3 664 224 82 69 chr20 47493128 47493360 -24660522 + MIR SINE MIR 2 236 -26 31 26 0 0 chr20 47494222 47494260 -24659622 + AT_rich Low_complexity Low_complexity 1 38 0 614 218 176 9 chr20 47496733 47496949 -24656933 - L1MB8 LINE L1 -49 6129 5878 493 280 87 39 chr20 47496949 47497330 -24656552 + L2 LINE L2 2015 2489 -825 333 0 0 0 chr20 47497658 47497695 -24656187 + (TG)n Simple_repeat Simple_repeat 2 38 0 1943 84 88 0 chr20 47497707 47497981 -24655901 - AluSg SINE Alu -12 298 1 655 254 28 7 chr20 47498011 47498153 -24655729 + AluJo SINE Alu 137 281 -31 505 231 113 5 chr20 47498174 47498360 -24655522 + L1MC5 LINE L1 7709 7914 -47 7923 20 3 0 chr20 47498370 47499485 -24654397 - L1PA3 LINE L1 -3 6152 5037 5039 16 0 0 chr20 47499485 47500058 -24653824 + L1PA3 LINE L1 4457 5029 -1117 2037 120 3 7 chr20 47500058 47500357 -24653525 - AluSx SINE Alu -14 298 1 1619 185 0 20 chr20 47500397 47500695 -24653187 - AluJo SINE Alu -19 293 2 1539 156 79 18 chr20 47500864 47501189 -24652693 + L1ME1 LINE L1 5824 6163 -3 2243 71 10 3 chr20 47501229 47501524 -24652358 + AluSq SINE Alu 1 297 -16 258 337 42 11 chr20 47501949 47502044 -24651838 + L2 LINE L2 3066 3163 -109 2018 89 41 7 chr20 47502660 47502953 -24650929 + AluSx SINE Alu 1 303 -9 603 282 49 0 chr20 47503431 47503594 -24650288 + LTR16A LTR ERVL 1 171 -279 650 253 44 6 chr20 47503626 47503808 -24650074 + LTR16A LTR ERVL 262 450 0 864 124 22 0 chr20 47503825 47503962 -24649920 + AluSp/q SINE Alu 172 311 -2 604 237 254 0 chr20 47504034 47504211 -24649671 + MIR SINE MIR 20 241 -21 202 217 65 0 chr20 47504187 47504233 -24649649 - MIR SINE MIR -21 241 193 * 326 327 173 20 chr20 47504892 47505244 -24648638 + L2 LINE L2 2818 3223 -49 416 321 64 21 chr20 47505451 47505638 -24648244 + MIR SINE MIR 30 224 -38 470 268 235 29 chr20 47506163 47506614 -24647268 - L2 LINE L2 -405 2909 2366 22 56 0 0 chr20 47507657 47507693 -24646189 + GC_rich Low_complexity Low_complexity 1 36 0 729 270 150 0 chr20 47509755 47509981 -24643901 + MIR SINE MIR 3 262 0 186 320 93 0 chr20 47511110 47511185 -24642697 - MIR SINE MIR -118 144 63 224 328 109 66 chr20 47512254 47512574 -24641308 - L2 LINE L2 0 3272 2939 616 257 81 59 chr20 47512891 47513113 -24640769 + MIR SINE MIR 8 234 -28 291 236 170 82 chr20 47513970 47514152 -24639730 + MIR SINE MIR 33 230 -32 282 216 215 31 chr20 47514407 47514545 -24639337 - MIR SINE MIR -61 147 41 227 133 22 22 chr20 47514554 47514599 -24639283 + L1M2a LINE L1 1645 1689 -5479 2333 88 3 10 chr20 47517850 47518147 -24635735 + AluSg SINE Alu 1 295 -15 294 309 57 0 chr20 47518909 47519032 -24634850 - L2 LINE L2 -62 3251 3122 514 231 47 47 chr20 47519129 47519298 -24634584 + MIR SINE MIR 21 189 -73 633 347 88 23 chr20 47519611 47520187 -24633695 - L2 LINE L2 -773 2541 1928 1533 187 19 4 chr20 47520193 47520460 -24633422 + AluJb SINE Alu 1 271 -41 974 133 0 0 chr20 47520466 47520601 -24633281 + FLAM_C SINE Alu 1 135 -8 395 360 6 31 chr20 47521154 47521315 -24632567 + L2 LINE L2 3116 3272 0 219 212 159 44 chr20 47521561 47521674 -24632208 + MIR3 SINE MIR 59 184 -24 1363 179 7 84 chr20 47523549 47523846 -24630036 - AluJo SINE Alu -4 308 35 2074 114 4 0 chr20 47523900 47524172 -24629710 + AluSx SINE Alu 5 277 -35 288 299 8 43 chr20 47524304 47524421 -24629461 - MIR SINE MIR -43 219 107 293 231 88 0 chr20 47526100 47526209 -24627673 - MIR SINE MIR -65 143 63 333 0 0 0 chr20 47527486 47527523 -24626359 + (TG)n Simple_repeat Simple_repeat 2 38 0 193 283 87 49 chr20 47528056 47528240 -24625642 - L2 LINE L2 -429 2885 2695 381 329 50 28 chr20 47528831 47529079 -24624803 - MIR SINE MIR -12 250 3 251 281 122 36 chr20 47529082 47529221 -24624661 - MIR3 SINE MIR -40 168 18 2030 244 238 20 chr20 47530780 47531782 -24622100 - L2 LINE L2 -474 2840 1621 253 236 56 0 chr20 47531798 47531870 -24622012 + MIR SINE MIR 117 192 -70 264 91 0 0 chr20 47532493 47532537 -24621345 + (T)n Simple_repeat Simple_repeat 1 44 0 211 299 103 26 chr20 47532540 47532657 -24621225 - MIR3 SINE MIR -72 136 11 203 317 171 12 chr20 47540162 47540326 -24613556 + MIR SINE MIR 36 225 -37 335 287 0 9 chr20 47540735 47540843 -24613039 - L2 LINE L2 -961 2353 2247 2587 69 0 0 chr20 47541586 47541891 -24611991 + AluSx SINE Alu 1 305 -7 356 227 311 15 chr20 47547216 47547348 -24606534 - MER5B DNA MER1_type -7 171 1 2587 64 0 0 chr20 47549913 47550211 -24603671 - AluSx SINE Alu -14 298 1 224 215 0 46 chr20 47553435 47553500 -24600382 + (TATATG)n Simple_repeat Simple_repeat 2 63 0 4286 170 60 16 chr20 47556276 47557322 -24596560 - L1MB4 LINE L1 -10 6406 5285 1562 160 55 59 chr20 47557322 47557629 -24596253 + AluJo SINE Alu 1 306 -6 4286 170 60 16 chr20 47557629 47558059 -24595823 - L1MB4 LINE L1 -1131 5285 4875 2429 124 25 5 chr20 47558062 47558505 -24595377 - L1MA4A LINE L1 -1 7004 6553 7234 151 51 36 chr20 47558505 47558690 -24595192 - L1MA4A LINE L1 -743 6105 5924 2007 132 31 7 chr20 47558690 47558978 -24594904 - AluJb SINE Alu -13 299 5 7234 151 51 36 chr20 47558978 47560429 -24593453 - L1MA4A LINE L1 -924 5924 4519 363 158 0 0 chr20 47560434 47560491 -24593391 - AluSp/q SINE Alu -14 289 233 1942 126 15 0 chr20 47560491 47560752 -24593130 - AluSx SINE Alu -47 265 1 12332 192 69 16 chr20 47560752 47563449 -24590433 - L1MA4A LINE L1 -4000 2849 12 5835 229 80 39 chr20 47563472 47563766 -24590116 - L1MB4 LINE L1 -1518 4864 4584 442 151 179 19 chr20 47563766 47563872 -24590010 - FLAM_A SINE Alu -10 123 1 5835 229 80 39 chr20 47563872 47563977 -24589905 - L1MB4 LINE L1 -1798 4584 4485 2141 118 23 7 chr20 47563977 47564281 -24589601 - AluSc SINE Alu 0 309 1 5835 229 80 39 chr20 47564281 47565409 -24588473 - L1MB4 LINE L1 -1897 4485 3406 1660 188 14 10 chr20 47565409 47565697 -24588185 - AluJo SINE Alu -23 289 1 2358 105 0 0 chr20 47565701 47565996 -24587886 - AluSq SINE Alu -17 296 2 5835 229 80 39 chr20 47565996 47566562 -24587320 - L1MB4 LINE L1 -2978 3404 2676 247 156 16 16 chr20 47566562 47566626 -24587256 + (TA)n Simple_repeat Simple_repeat 2 65 0 363 285 59 59 chr20 47566626 47566938 -24586944 - L1MC4 LINE L1 -1337 6985 1813 312 167 54 0 chr20 47567469 47567714 -24586168 + (TA)n Simple_repeat Simple_repeat 1 258 0 * 363 312 68 64 chr20 47567484 47567734 -24586148 - L1MCa LINE L1 -4346 2080 1830 943 203 51 12 chr20 47567738 47568089 -24585793 - L1MB4 LINE L1 -3791 2591 2230 5126 215 99 55 chr20 47568123 47568281 -24585601 - L1MB4 LINE L1 -4331 2053 1903 2255 81 24 7 chr20 47568281 47568577 -24585305 - AluSg SINE Alu -9 301 1 5126 215 99 55 chr20 47568577 47569984 -24583898 - L1MB4 LINE L1 -4481 1903 296 2193 125 7 0 chr20 47569984 47570280 -24583602 - AluSx SINE Alu -14 298 1 5126 215 99 55 chr20 47570280 47570560 -24583322 - L1MB4 LINE L1 -6088 296 30 11171 84 4 8 chr20 47576095 47577611 -24576271 + L1PA6 LINE L1 656 2165 -3981 23360 45 8 3 chr20 47577611 47581132 -24572750 + L1PA6 LINE L1 2624 6150 -4 33 56 0 0 chr20 47581758 47581812 -24572070 + AT_rich Low_complexity Low_complexity 1 54 0 358 298 133 39 chr20 47581887 47582172 -24571710 - L1ME4a LINE L1 -234 5887 5576 4598 140 60 21 chr20 47582254 47582797 -24571085 + L1MB7 LINE L1 5063 5583 -601 2203 102 3 0 chr20 47582797 47583124 -24570758 + AluSp SINE Alu 1 328 0 4598 140 60 21 chr20 47583124 47583586 -24570296 + L1MB7 LINE L1 5583 6109 -75 287 185 0 19 chr20 47584037 47584091 -24569791 - MARNA DNA Mariner -240 346 294 1486 194 65 7 chr20 47584092 47584371 -24569511 + AluJo SINE Alu 1 295 -17 680 330 18 9 chr20 47584512 47584739 -24569143 - MIR SINE MIR -21 241 13 2047 118 9 22 chr20 47585255 47585570 -24568312 + AluSx SINE Alu 1 311 -1 2221 57 9 57 chr20 47585934 47586250 -24567632 + AluY SINE Alu 1 301 -10 523 284 104 38 chr20 47586614 47587290 -24566592 - L1ME4a LINE L1 -69 6052 5313 713 195 57 74 chr20 47587404 47587702 -24566180 + L1MC5 LINE L1 7637 7929 -32 22 0 0 0 chr20 47587753 47587775 -24566107 + AT_rich Low_complexity Low_complexity 1 22 0 247 265 145 43 chr20 47588036 47588153 -24565729 - MIR SINE MIR -61 147 19 851 160 0 35 chr20 47588298 47588442 -24565440 + FRAM SINE Alu 23 161 -15 1624 174 11 7 chr20 47588444 47588754 -24565128 + AluJo SINE Alu 1 311 0 2505 66 0 0 chr20 47589205 47589510 -24564372 - AluY SINE Alu -6 305 1 390 326 14 14 chr20 47589628 47589772 -24564110 - L3 LINE CR1 0 1577 1434 201 107 0 0 chr20 47589888 47589916 -24563966 - MIR SINE MIR -18 244 217 1034 249 183 11 chr20 47589976 47590325 -24563557 + MLT1I LTR MaLR 1 409 0 458 335 9 57 chr20 47590446 47590673 -24563209 - L2 LINE L2 -182 3090 2875 608 184 46 81 chr20 47590692 47590866 -24563016 + MER69A DNA AcHobo 5 172 -5 1860 146 22 0 chr20 47590943 47591269 -24562613 - AluJb SINE Alu 0 332 1 536 283 54 22 chr20 47591314 47591498 -24562384 - L3 LINE CR1 -334 1243 1054 1890 257 49 32 chr20 47591729 47592624 -24561258 - L2 LINE L2 -4 3309 2400 222 118 0 0 chr20 47593188 47593222 -24560660 + (A)n Simple_repeat Simple_repeat 1 34 0 1536 276 45 39 chr20 47593327 47593935 -24559947 + L1MC4a LINE L1 5370 6001 -177 287 339 274 25 chr20 47594409 47594807 -24559075 - L3 LINE CR1 -48 1529 1033 398 245 75 108 chr20 47595080 47595358 -24558524 + L2 LINE L2 3042 3310 -3 469 284 40 31 chr20 47595396 47595594 -24558288 + MIR SINE MIR 64 259 -3 2141 179 14 85 chr20 47595725 47595770 -24558112 - L1MB2 LINE L1 -7 6164 6117 2322 104 0 0 chr20 47595770 47596067 -24557815 - AluSq SINE Alu -14 299 3 2141 179 14 85 chr20 47596067 47596397 -24557485 - L1MB2 LINE L1 -54 6117 5840 1766 107 162 0 chr20 47596397 47596650 -24557232 + AluY SINE Alu 1 294 -7 2141 179 14 85 chr20 47596650 47596836 -24557046 - L1MB2 LINE L1 -331 5840 5642 2230 149 34 8 chr20 47598679 47599035 -24554847 - MLT1A1 LTR MaLR 0 365 1 5039 167 22 19 chr20 47599173 47600401 -24553481 - L1MB3 LINE L1 -7 6176 4789 604 140 153 6 chr20 47600401 47600558 -24553324 + Charlie5 DNA MER1_type 2406 2585 -27 1518 168 55 26 chr20 47600739 47600984 -24552898 + MER33 DNA MER1_type 1 258 -2327 3383 117 25 14 chr20 47600984 47601499 -24552383 - L1MC1 LINE L1 0 6333 5813 1518 168 55 26 chr20 47601499 47601562 -24552320 + MER33 DNA MER1_type 258 318 -6 486 338 153 29 chr20 47601649 47601989 -24551893 + L2 LINE L2 2891 3272 0 906 244 36 9 chr20 47602357 47602578 -24551304 + L3b LINE CR1 1129 1355 -228 2412 41 21 0 chr20 47602875 47603166 -24550716 - AluY SINE Alu -14 297 1 15250 31 11 0 chr20 47605562 47608049 -24545833 + L1PA4 LINE L1 3649 6152 -3 228 308 128 38 chr20 47608211 47608344 -24545538 + L2 LINE L2 3109 3253 -19 248 266 25 13 chr20 47608658 47608737 -24545145 + GA-rich Low_complexity Low_complexity 3 82 0 391 256 116 118 chr20 47609135 47609274 -24544608 - MLT1K LTR MaLR -24 564 426 2508 54 0 22 chr20 47609274 47609590 -24544292 - AluY SINE Alu -2 309 1 391 256 116 118 chr20 47609590 47609943 -24543939 - MLT1K LTR MaLR -162 426 100 1478 111 0 19 chr20 47610284 47610500 -24543382 - AluSg/x SINE Alu -18 292 81 6655 108 175 10 chr20 47610682 47612161 -24541721 - L1MA3 LINE L1 -3 6302 4521 629 235 93 39 chr20 47612450 47612654 -24541228 - MIR SINE MIR -34 228 14 201 293 229 29 chr20 47613713 47613853 -24540029 - MIR SINE MIR -18 244 77 23 0 0 0 chr20 47613951 47613974 -24539908 + AT_rich Low_complexity Low_complexity 1 23 0 1139 207 18 9 chr20 47614280 47614497 -24539385 - MER20 DNA MER1_type 0 219 1 745 196 0 38 chr20 47614671 47614804 -24539078 + FLAM_C SINE Alu 2 129 -14 197 204 56 0 chr20 47615307 47615361 -24538521 - L2 LINE L2 -1905 1409 1353 236 313 27 80 chr20 47615383 47615533 -24538349 - MIR SINE MIR -10 252 111 2172 119 0 0 chr20 47616872 47617194 -24536688 + AluSx SINE Alu 1 322 0 1839 147 3 27 chr20 47617260 47617559 -24536323 + AluJb SINE Alu 1 292 -20 356 280 21 98 chr20 47617582 47617818 -24536064 + MIR SINE MIR 2 219 -43 260 364 60 38 chr20 47618204 47618511 -24535371 + L2 LINE L2 2721 3037 -276 1431 201 95 22 chr20 47619985 47620354 -24533528 + L1MDb LINE L1 16 411 -5998 1331 180 65 17 chr20 47620388 47620682 -24533200 + L1MDb LINE L1 659 966 -5443 710 165 0 0 chr20 47620683 47620792 -24533090 + AluJb SINE Alu 1 109 -203 1253 208 61 15 chr20 47620794 47621145 -24532737 + L1MDb LINE L1 1320 1690 -4716 1014 114 0 0 chr20 47621146 47621278 -24532604 + AluSq/x SINE Alu 1 132 -181 343 217 38 9 chr20 47621303 47621447 -24532435 + L1MDb LINE L1 1677 1965 -4441 595 198 0 18 chr20 47621466 47621577 -24532305 + FLAM_A SINE Alu 21 129 -13 464 312 86 68 chr20 47622036 47622360 -24531522 + L2 LINE L2 2528 2857 -457 470 294 30 51 chr20 47622566 47622763 -24531119 - L2 LINE L2 -195 3077 2885 227 150 50 0 chr20 47622840 47622880 -24531002 + L2 LINE L2 3021 3062 -251 238 313 61 62 chr20 47623092 47623309 -24530573 + MIR SINE MIR 8 224 -38 284 119 226 18 chr20 47623324 47623436 -24530446 - L1MB3 LINE L1 -2 6181 6041 2216 100 0 0 chr20 47623861 47624150 -24529732 - AluSx SINE Alu -23 289 1 412 279 16 39 chr20 47624799 47624928 -24528954 + L2 LINE L2 3147 3272 0 3507 185 73 3 chr20 47625391 47626076 -24527806 + MER44D DNA MER2_type 1 605 0 564 169 67 128 chr20 47627463 47627658 -24526224 - MER58A DNA MER1_type 0 224 42 519 213 207 7 chr20 47629842 47629992 -24523890 + MER5A DNA MER1_type 10 189 0 2136 109 7 3 chr20 47630110 47630404 -24523478 + AluSx SINE Alu 1 295 -17 1949 146 23 13 chr20 47631132 47631441 -24522441 + AluSx SINE Alu 1 312 0 1141 161 0 0 chr20 47632395 47632575 -24521307 - AluJb SINE Alu 0 312 133 182 161 0 0 chr20 47632770 47632801 -24521081 + MER5A DNA MER1_type 1 31 -158 245 362 0 9 chr20 47632966 47633082 -24520800 + GA-rich Low_complexity Low_complexity 2 116 0 198 307 53 61 chr20 47634445 47634559 -24519323 - L2 LINE L2 -940 2374 2262 2206 82 0 31 chr20 47634632 47634925 -24518957 + AluSg SINE Alu 19 302 -8 341 241 137 20 chr20 47634939 47635216 -24518666 - L1MC5 LINE L1 -134 7908 7503 25 0 0 0 chr20 47635255 47635280 -24518602 + AT_rich Low_complexity Low_complexity 1 25 0 1649 188 96 15 chr20 47635396 47635672 -24518210 + L1MB3 LINE L1 4838 5167 -979 1971 144 0 10 chr20 47635672 47635971 -24517911 + AluSx SINE Alu 1 296 -16 1649 188 96 15 chr20 47635971 47636151 -24517731 + L1MB3 LINE L1 5167 5331 -815 2280 96 0 17 chr20 47636199 47636501 -24517381 + AluSx SINE Alu 1 297 -15 3807 166 62 18 chr20 47636513 47637152 -24516730 + L1MB3 LINE L1 5324 6008 -175 2444 84 0 3 chr20 47637152 47637460 -24516422 + AluSx SINE Alu 1 307 -5 3807 166 62 18 chr20 47637460 47637644 -24516238 + L1MB3 LINE L1 6008 6183 0 186 311 14 14 chr20 47637653 47637727 -24516155 - MIR3 SINE MIR -13 195 122 2283 84 0 16 chr20 47637951 47638261 -24515621 - AluY SINE Alu -6 305 1 23 33 0 0 chr20 47638756 47638786 -24515096 + AT_rich Low_complexity Low_complexity 1 30 0 187 237 0 0 chr20 47639978 47640016 -24513866 - L2 LINE L2 0 3313 3276 2447 92 0 0 chr20 47640192 47640497 -24513385 - AluSx SINE Alu -7 305 1 264 306 92 24 chr20 47641056 47641262 -24512620 - L1ME LINE L1 -536 5585 5366 205 279 213 0 chr20 47642106 47642167 -24511715 - MIR3 SINE MIR -9 199 126 180 378 111 0 chr20 47642866 47643001 -24510881 - MIR3 SINE MIR -9 199 50 904 249 51 24 chr20 47643951 47644204 -24509678 + MIR SINE MIR 3 262 0 426 257 60 53 chr20 47644583 47644845 -24509037 - L2 LINE L2 -281 2991 2723 198 91 0 0 chr20 47645606 47645639 -24508243 + (TAAAA)n Simple_repeat Simple_repeat 3 35 0 237 226 38 0 chr20 47646539 47646592 -24507290 - MIR SINE MIR -79 183 129 364 204 57 0 chr20 47648424 47648512 -24505370 + L1MB7 LINE L1 6015 6107 -77 726 182 0 28 chr20 47649258 47649401 -24504481 + FLAM_C SINE Alu 1 139 -4 248 316 20 0 chr20 47650192 47650290 -24503592 + T-rich Low_complexity Low_complexity 3 102 0 258 303 0 0 chr20 47650892 47650981 -24502901 + L1ME LINE L1 5574 5662 -459 2429 56 0 0 chr20 47651007 47651295 -24502587 + AluY SINE Alu 1 288 -23 21 0 0 0 chr20 47651295 47651316 -24502566 + AT_rich Low_complexity Low_complexity 1 21 0 200 109 0 65 chr20 47651340 47651386 -24502496 + (CAAAAA)n Simple_repeat Simple_repeat 4 46 0 447 290 65 12 chr20 47652671 47652840 -24501042 - MIR SINE MIR -37 225 48 260 71 48 0 chr20 47653062 47653104 -24500778 + T-rich Low_complexity Low_complexity 1 44 0 181 271 51 17 chr20 47653666 47653725 -24500157 + MER5A DNA MER1_type 41 101 -88 2324 99 3 10 chr20 47654833 47655147 -24498735 + AluSx SINE Alu 1 312 0 709 235 138 0 chr20 47655471 47655667 -24498215 - MIR SINE MIR -33 229 7 303 314 29 0 chr20 47656912 47657014 -24496868 - MIR SINE MIR -95 167 63 1356 179 70 25 chr20 47657783 47658068 -24495814 + AluJo SINE Alu 1 298 -14 2308 88 0 3 chr20 47659059 47659356 -24494526 + AluSg SINE Alu 1 296 -14 2460 72 7 0 chr20 47659624 47659930 -24493952 + AluY SINE Alu 1 308 -3 247 226 48 0 chr20 47660109 47660171 -24493711 - MIR SINE MIR -128 134 70 1530 181 151 46 chr20 47660569 47661071 -24492811 + L1MB4 LINE L1 5618 6172 -8 299 294 66 149 chr20 47661184 47661273 -24492609 - L2 LINE L2 0 3272 3177 2136 109 3 3 chr20 47661273 47661581 -24492301 + AluSx SINE Alu 1 308 0 299 294 66 149 chr20 47661581 47661912 -24491970 - L2 LINE L2 -95 3177 2886 242 224 69 0 chr20 47662090 47662148 -24491734 - L1M4 LINE L1 -3409 2737 2676 5543 128 14 7 chr20 47662176 47663539 -24490343 + L1PA16 LINE L1 4764 6161 -5 908 240 53 3 chr20 47663575 47663875 -24490007 - L1M4 LINE L1 -3466 2680 2366 1010 218 87 60 chr20 47665520 47665855 -24488027 - MER2 DNA MER2_type 0 344 1 2792 223 73 17 chr20 47665885 47666865 -24487017 - L1ME1 LINE L1 -88 6078 5054 484 237 0 0 chr20 47666914 47667011 -24486871 - FLAM_A SINE Alu -38 104 8 450 0 0 0 chr20 47667018 47667068 -24486814 + (TTTA)n Simple_repeat Simple_repeat 2 51 0 339 238 67 98 chr20 47667083 47667145 -24486737 - L1ME1 LINE L1 -1178 4968 4906 3027 104 13 11 chr20 47667145 47667596 -24486286 - L1PA13 LINE L1 -2 6161 5710 339 238 67 98 chr20 47667596 47667697 -24486185 - L1ME1 LINE L1 -1240 4906 4810 1965 234 92 10 chr20 47667728 47668227 -24485655 + MLT1F1 LTR MaLR 28 567 0 253 282 12 0 chr20 47668768 47668853 -24485029 + L1ME4a LINE L1 5953 6038 -83 1199 87 0 0 chr20 47669074 47669224 -24484658 - AluSg/x SINE Alu -8 302 153 1952 94 4 22 chr20 47669224 47669499 -24484383 - AluSx SINE Alu -42 270 1 1452 208 27 10 chr20 47669696 47669989 -24483893 + AluJo SINE Alu 1 298 -14 271 293 183 45 chr20 47670039 47670285 -24483597 + L3 LINE CR1 1237 1516 -61 427 235 69 78 chr20 47670306 47670523 -24483359 + L1MC5 LINE L1 7712 7926 -35 200 279 0 0 chr20 47671748 47671791 -24482091 - L2 LINE L2 -85 3187 3145 2578 83 23 54 chr20 47671973 47672360 -24481522 - THE1C LTR MaLR 0 375 1 245 210 32 0 chr20 47672441 47672503 -24481379 + HsTC2 DNA Tc2 5 68 -1830 350 265 43 17 chr20 47672506 47672623 -24481259 + L1MC/D LINE L1 5552 5671 -2137 293 295 29 29 chr20 47673156 47673261 -24480621 - L2 LINE L2 -215 3057 2953 1982 137 3 0 chr20 47673469 47673769 -24480113 - AluSx SINE Alu -11 301 1 207 222 74 37 chr20 47674274 47674328 -24479554 + MIR SINE MIR 57 112 -150 237 250 0 0 chr20 47674418 47674466 -24479416 - MIR SINE MIR -63 145 98 2110 112 3 3 chr20 47676160 47676465 -24477417 + AluSq SINE Alu 1 305 -8 199 204 318 23 chr20 47676713 47676801 -24477081 - L2 LINE L2 0 3313 3200 26 30 0 0 chr20 47677661 47677694 -24476188 + AT_rich Low_complexity Low_complexity 1 33 0 249 295 0 0 chr20 47677917 47677978 -24475904 + MIR SINE MIR 84 144 -64 28 0 0 0 chr20 47678365 47678393 -24475489 + AT_rich Low_complexity Low_complexity 1 28 0 1060 236 24 24 chr20 47678716 47678970 -24474912 - MER58B DNA MER1_type -4 337 84 * 1925 134 46 3 chr20 47678953 47679260 -24474622 - MER7A DNA MER2_type -27 319 2 296 176 20 0 chr20 47679262 47679313 -24474569 - MER58B DNA MER1_type -246 95 44 326 289 81 102 chr20 47680093 47680339 -24473543 + MIR SINE MIR 19 259 -3 225 200 50 50 chr20 47680921 47680981 -24472901 + MIR SINE MIR 157 216 -46 219 36 0 0 chr20 47681306 47681334 -24472548 + (TAAAA)n Simple_repeat Simple_repeat 1 28 0 1669 157 11 4 chr20 47681390 47681670 -24472212 + AluSx SINE Alu 1 282 -30 516 156 0 0 chr20 47681705 47681782 -24472100 - MER3 DNA MER1_type -124 85 9 2349 63 7 0 chr20 47682182 47682483 -24471399 - AluSp SINE Alu -10 303 1 838 201 16 16 chr20 47683222 47683406 -24470476 - MER5A DNA MER1_type -3 186 3 2661 133 23 12 chr20 47683406 47683833 -24470049 + Tigger2a DNA MER2_type 1 433 -1 1824 143 0 3 chr20 47684268 47684555 -24469327 + AluSx SINE Alu 1 286 -26 198 0 0 0 chr20 47684569 47684591 -24469291 + (CAT)n Simple_repeat Simple_repeat 2 23 0 299 271 66 88 chr20 47684691 47684872 -24469010 + MER5A DNA MER1_type 7 183 -6 1518 148 45 8 chr20 47685018 47685282 -24468600 - AluJo SINE Alu -8 304 31 1319 111 10 5 chr20 47685653 47685851 -24468031 - AluSg/x SINE Alu -9 303 105 2330 57 3 10 chr20 47686555 47686854 -24467028 - AluY SINE Alu -14 297 1 1786 138 3 26 chr20 47687470 47687774 -24466108 - AluJb SINE Alu -15 297 1 284 264 123 74 chr20 47688099 47688262 -24465620 - MIR SINE MIR -43 219 49 2417 66 0 0 chr20 47689348 47689650 -24464232 + AluY SINE Alu 1 302 -9 1598 160 29 7 chr20 47691294 47691569 -24462313 + AluJo SINE Alu 1 281 -31 180 0 0 0 chr20 47693110 47693130 -24460752 + (T)n Simple_repeat Simple_repeat 1 20 0 618 220 46 40 chr20 47694753 47694926 -24458956 + MIR SINE MIR 89 262 0 433 285 110 53 chr20 47695374 47695602 -24458280 + L2 LINE L2 3014 3254 -18 216 214 36 0 chr20 47696645 47696701 -24457181 + GA-rich Low_complexity Low_complexity 1 58 0 24 53 0 0 chr20 47696960 47696998 -24456884 + GC_rich Low_complexity Low_complexity 1 38 0 209 148 34 80 chr20 47697286 47697374 -24456508 + (CCGGG)n Simple_repeat Simple_repeat 5 88 0 24 0 0 0 chr20 47698196 47698220 -24455662 + AT_rich Low_complexity Low_complexity 1 24 0 280 225 25 38 chr20 47698302 47698382 -24455500 - L2 LINE L2 -5 3308 3230 1668 138 64 17 chr20 47698779 47699076 -24454806 + AluJb SINE Alu 1 311 -1 243 302 47 28 chr20 47699098 47699204 -24454678 + L2 LINE L2 2625 2732 -582 2062 120 7 0 chr20 47699523 47699832 -24454050 + AluSx SINE Alu 1 311 -1 404 307 34 45 chr20 47699850 47700029 -24453853 + L2 LINE L2 3118 3294 -19 519 301 7 7 chr20 47700057 47700193 -24453689 + MIR SINE MIR 15 150 -112 263 274 40 23 chr20 47700217 47700322 -24453560 - MIR SINE MIR -103 105 1 2153 109 13 0 chr20 47700516 47700818 -24453064 - AluSg SINE Alu -4 306 1 280 220 64 18 chr20 47701183 47701292 -24452590 - MER113 DNA MER1_type? -407 114 1 310 248 48 19 chr20 47701468 47701573 -24452309 + MER103 DNA DNA 44 151 -15 984 79 0 22 chr20 47701582 47701721 -24452161 + AluSq/x SINE Alu 1 136 -177 2098 112 0 3 chr20 47701721 47702015 -24451867 + AluSx SINE Alu 1 293 -19 1420 97 5 0 chr20 47702087 47702273 -24451609 - U2 snRNA snRNA -1 187 1 285 278 49 56 chr20 47702526 47702688 -24451194 + MLT1K LTR MaLR 194 354 -234 1404 181 49 0 chr20 47702784 47703049 -24450833 + AluJb SINE Alu 11 288 -24 2341 60 7 0 chr20 47703544 47703843 -24450039 + AluSp SINE Alu 1 301 -12 805 283 29 29 chr20 47705171 47705411 -24448471 - MIR SINE MIR -11 251 12 263 354 205 16 chr20 47705548 47705801 -24448081 + L2 LINE L2 1896 2100 -1214 2186 105 3 0 chr20 47705801 47706095 -24447787 - AluSx SINE Alu -17 295 1 263 354 205 16 chr20 47706095 47706349 -24447533 + L2 LINE L2 2100 2499 -815 414 0 0 0 chr20 47706454 47706500 -24447382 + (CA)n Simple_repeat Simple_repeat 1 46 0 1086 306 77 69 chr20 47706505 47707089 -24446793 - L2 LINE L2 -35 3237 2659 1502 151 133 0 chr20 47707089 47707215 -24446667 + AluSx SINE Alu 1 109 -203 351 0 0 0 chr20 47707215 47707254 -24446628 + (CA)n Simple_repeat Simple_repeat 2 40 0 1502 151 133 0 chr20 47707254 47707398 -24446484 + AluSx SINE Alu 109 307 -5 1086 306 77 69 chr20 47707398 47707428 -24446454 - L2 LINE L2 -613 2659 2631 1297 212 13 30 chr20 47707428 47707730 -24446152 + AluJo SINE Alu 1 297 -15 1086 306 77 69 chr20 47707730 47708149 -24445733 - L2 LINE L2 -641 2631 2183 370 306 22 56 chr20 47708153 47708333 -24445549 - L2 LINE L2 -1443 1871 1698 1715 294 85 9 chr20 47709260 47709584 -24444298 + L2 LINE L2 2103 2401 -913 2140 108 0 0 chr20 47709584 47709879 -24444003 - AluSg SINE Alu -14 296 2 1715 294 85 9 chr20 47709879 47710116 -24443766 + L2 LINE L2 2401 2707 -607 1425 170 22 11 chr20 47710145 47710422 -24443460 + AluJo SINE Alu 1 280 -32 285 29 0 0 chr20 47710426 47710460 -24443422 + (GAAAA)n Simple_repeat Simple_repeat 2 35 0 2147 112 0 10 chr20 47710462 47710776 -24443106 + AluSx SINE Alu 1 311 -1 2056 106 4 0 chr20 47710782 47711057 -24442825 + AluSx SINE Alu 1 276 -36 441 0 0 0 chr20 47711064 47711113 -24442769 + (CAAAA)n Simple_repeat Simple_repeat 3 51 0 1142 284 46 20 chr20 47711113 47711604 -24442278 + L2 LINE L2 2711 3226 -87 1374 218 16 19 chr20 47711604 47711911 -24441971 - AluJo SINE Alu -6 306 1 1142 284 46 20 chr20 47711911 47712002 -24441880 + L2 LINE L2 3226 3313 0 2113 107 0 7 chr20 47712089 47712387 -24441495 - AluSp SINE Alu -17 296 1 194 235 0 0 chr20 47712387 47712421 -24441461 - MIR SINE MIR -112 150 117 1961 134 3 0 chr20 47712425 47712744 -24441138 + AluSx SINE Alu 1 320 0 487 247 0 80 chr20 47712843 47712870 -24441012 + L2 LINE L2 3176 3204 -109 2131 68 0 41 chr20 47712870 47713189 -24440693 - AluY SINE Alu 0 307 1 487 247 0 80 chr20 47713189 47713310 -24440572 + L2 LINE L2 3204 3313 0 417 20 0 0 chr20 47713968 47714018 -24439864 + (TG)n Simple_repeat Simple_repeat 1 50 0 414 266 78 0 chr20 47714283 47714411 -24439471 - MIR SINE MIR -53 209 72 2083 110 0 0 chr20 47715075 47715366 -24438516 - AluSc SINE Alu -5 304 14 1675 127 39 11 chr20 47715410 47715693 -24438189 + AluSg SINE Alu 1 291 -19 261 224 35 82 chr20 47715929 47716014 -24437868 - L3 LINE CR1 -106 1471 1391 318 250 71 0 chr20 47716081 47716165 -24437717 - L3 LINE CR1 -203 1374 1285 1072 170 129 0 chr20 47716664 47716905 -24436977 + MER33 DNA MER1_type 1 272 -52 1137 211 5 5 chr20 47716905 47717128 -24436754 + AluJb SINE Alu 1 223 -89 1234 167 124 14 chr20 47717139 47717328 -24436554 - AluJb SINE Alu -7 305 75 2785 10 0 0 chr20 47717328 47717639 -24436243 + AluYa5 SINE Alu 1 311 0 1234 167 124 14 chr20 47717639 47717724 -24436158 - AluJb SINE Alu -237 75 1 254 226 0 0 chr20 47717726 47717779 -24436103 + MER33 DNA MER1_type 311 363 0 401 326 150 28 chr20 47717850 47718634 -24435248 - L2 LINE L2 -154 3118 2233 355 265 59 0 chr20 47718629 47718731 -24435151 + MIR SINE MIR 91 198 -64 * 9133 148 120 15 chr20 47718732 47720319 -24433563 + MER52A LTR ERV1 1 1753 -2 191 350 98 16 chr20 47720614 47720737 -24433145 + MIR SINE MIR 16 148 -60 219 311 126 0 chr20 47721233 47721336 -24432546 - MIR SINE MIR -88 174 59 215 278 33 56 chr20 47721369 47721459 -24432423 + MIR SINE MIR 17 104 -158 832 237 16 1 chr20 47721479 47721685 -24432197 + MIR SINE MIR 27 234 -28 1926 155 10 7 chr20 47722185 47722488 -24431394 - AluJb SINE Alu -8 304 1 265 238 16 0 chr20 47722948 47723011 -24430871 + MIR SINE MIR 88 151 -57 484 253 103 66 chr20 47723136 47723409 -24430473 + MLT1I LTR MaLR 3 285 -124 245 242 105 21 chr20 47723463 47723558 -24430324 + MLT1I LTR MaLR 282 384 -25 2335 98 0 13 chr20 47723640 47723956 -24429926 - AluSx SINE Alu 0 312 1 597 277 28 0 chr20 47723960 47724126 -24429756 - L2 LINE L2 -265 3048 2875 2521 81 0 0 chr20 47724126 47724436 -24429446 + AluY SINE Alu 1 310 -1 6051 134 25 52 chr20 47724563 47724918 -24428964 - L1MA6 LINE L1 0 6300 5937 1778 147 13 40 chr20 47724918 47725077 -24428805 - AluJo SINE Alu -15 297 148 2361 79 0 10 chr20 47725077 47725369 -24428513 - AluSg SINE Alu -16 294 6 1778 147 13 40 chr20 47725369 47725509 -24428373 - AluJo SINE Alu -164 148 6 6051 134 25 52 chr20 47725509 47725794 -24428088 - L1MA6 LINE L1 -363 5937 5646 207 0 0 0 chr20 47725794 47725817 -24428065 + (TTTCC)n Simple_repeat Simple_repeat 3 25 0 2106 135 0 3 chr20 47725818 47726114 -24427768 - AluSg SINE Alu -15 295 1 6051 134 25 52 chr20 47726114 47726670 -24427212 - L1MA6 LINE L1 -654 5646 5132 1973 150 0 7 chr20 47726670 47726963 -24426919 - AluSx SINE Alu -21 291 1 6051 134 25 52 chr20 47726963 47727305 -24426577 - L1MA6 LINE L1 -1168 5132 4782 1063 222 43 65 chr20 47727453 47727558 -24426324 - L1MC5 LINE L1 -36 7925 7819 2417 57 0 30 chr20 47727558 47727857 -24426025 - AluY SINE Alu -21 290 1 1063 222 43 65 chr20 47727857 47728080 -24425802 - L1MC5 LINE L1 -142 7819 7593 1671 128 117 8 chr20 47728080 47728345 -24425537 + AluSg1 SINE Alu 1 294 -15 198 0 0 0 chr20 47728345 47728367 -24425515 + (TA)n Simple_repeat Simple_repeat 2 23 0 189 0 0 0 chr20 47728372 47728393 -24425489 + (TG)n Simple_repeat Simple_repeat 2 22 0 1063 222 43 65 chr20 47728393 47728516 -24425366 - L1MC5 LINE L1 -371 7590 7476 874 146 8 0 chr20 47728595 47728725 -24425157 + AluSx SINE Alu 1 131 -182 1377 111 0 0 chr20 47728790 47728970 -24424912 + AluSx SINE Alu 128 307 -3 234 0 0 0 chr20 47728970 47728996 -24424886 + (TA)n Simple_repeat Simple_repeat 2 27 0 321 214 24 36 chr20 47728998 47729082 -24424800 - L1MC5 LINE L1 -516 7445 7363 1592 118 49 151 chr20 47729082 47729386 -24424496 + Charlie3 DNA MER1_type 32 2677 -33 396 93 19 0 chr20 47729449 47729503 -24424379 + Charlie3 DNA MER1_type 2652 2706 -4 1322 214 59 52 chr20 47729503 47729924 -24423958 - L1MC5 LINE L1 -575 7386 6963 479 148 47 27 chr20 47729948 47730097 -24423785 + CT-rich Low_complexity Low_complexity 3 154 0 2151 132 3 10 chr20 47730243 47730554 -24423328 + AluSq SINE Alu 1 309 -4 795 101 0 0 chr20 47730574 47730683 -24423199 - L1MA5 LINE L1 -9 6291 6183 1509 288 131 43 chr20 47730695 47731247 -24422635 - L1MC4a LINE L1 -304 5817 5315 2326 94 0 16 chr20 47731247 47731555 -24422327 + AluSp SINE Alu 1 303 -10 1509 288 131 43 chr20 47731555 47732013 -24421869 - L1MC4a LINE L1 -806 5315 5834 1574 209 0 31 chr20 47732013 47732334 -24421548 - AluJb SINE Alu -1 311 1 1509 288 131 43 chr20 47732334 47732604 -24421278 - L1MC4a LINE L1 -286 5835 5590 572 210 0 0 chr20 47732672 47732791 -24421091 - L1MA7 LINE L1 0 6291 6173 635 189 31 78 chr20 47732798 47732937 -24420945 + MIR SINE MIR 75 206 -56 2028 120 0 31 chr20 47732937 47733075 -24420807 + AluSx SINE Alu 1 142 -182 2077 142 0 13 chr20 47733075 47733391 -24420491 + AluSx SINE Alu 1 312 0 2028 120 0 31 chr20 47733391 47733585 -24420297 + AluSx SINE Alu 142 324 0 635 189 31 78 chr20 47733585 47733634 -24420248 + MIR SINE MIR 206 256 -6 250 171 0 0 chr20 47734232 47734273 -24419609 + MER3 DNA MER1_type 42 82 -127 * 358 239 34 0 chr20 47734260 47734348 -24419534 - MER3 DNA MER1_type -118 91 1 208 311 0 0 chr20 47735375 47735436 -24418446 + L2 LINE L2 3153 3213 -59 240 227 200 45 chr20 47736074 47736184 -24417698 - L1ME3A LINE L1 -69 6101 5975 1369 121 44 10 chr20 47736211 47736417 -24417465 - AluSg/x SINE Alu -14 298 86 1260 283 34 24 chr20 47736417 47736520 -24417362 - L1ME3A LINE L1 -264 5906 5806 1870 150 35 40 chr20 47736520 47736621 -24417261 - MER2 DNA MER2_type 0 344 244 2106 134 3 6 chr20 47736621 47736934 -24416948 - AluSx SINE Alu 0 312 1 1870 150 35 40 chr20 47736934 47736958 -24416924 - MER2 DNA MER2_type -100 244 221 2330 72 9 31 chr20 47736958 47737276 -24416606 - AluY SINE Alu 0 311 1 1870 150 35 40 chr20 47737276 47737495 -24416387 - MER2 DNA MER2_type -123 221 1 1260 283 34 24 chr20 47737495 47737857 -24416025 - L1ME3A LINE L1 -364 5806 5436 2108 141 7 0 chr20 47738105 47738410 -24415472 - AluSx SINE Alu -5 307 1 291 93 0 0 chr20 47738509 47738552 -24415330 + (TA)n Simple_repeat Simple_repeat 2 44 0 227 114 0 171 chr20 47738582 47738652 -24415230 - L1ME LINE L1 -474 5696 5639 288 0 0 0 chr20 47738673 47738705 -24415177 + (CA)n Simple_repeat Simple_repeat 1 32 0 2276 105 7 0 chr20 47739092 47739387 -24414495 - AluSq SINE Alu -16 297 1 1958 157 92 61 chr20 47740605 47740843 -24413039 + MLT1D LTR MaLR 1 230 -275 1699 168 7 4 chr20 47740843 47741147 -24412735 + AluJb SINE Alu 1 305 0 1958 157 92 61 chr20 47741147 47741397 -24412485 + MLT1D LTR MaLR 230 505 0 249 33 0 0 chr20 47741405 47741435 -24412447 + (CA)n Simple_repeat Simple_repeat 2 31 0 1040 186 37 52 chr20 47742030 47742482 -24411400 - MLT1A1 LTR MaLR -1 373 1 397 265 17 0 chr20 47742745 47742862 -24411020 - MIR SINE MIR -15 247 129 1808 161 20 26 chr20 47742876 47743181 -24410701 - AluJb SINE Alu -9 303 1 30 0 0 0 chr20 47743230 47743260 -24410622 + AT_rich Low_complexity Low_complexity 1 30 0 284 299 31 55 chr20 47743261 47743388 -24410494 - L2 LINE L2 0 3272 3149 247 360 35 0 chr20 47743985 47744099 -24409783 + MIR SINE MIR 47 164 -98 2116 142 0 0 chr20 47744158 47744461 -24409421 - AluJb SINE Alu -9 303 1 3710 120 16 0 chr20 47744895 47745411 -24408471 - MER1A DNA MER1_type 0 529 6 23632 144 15 20 chr20 47745421 47747174 -24406708 + L1M1 LINE L1 16 1777 -5788 195 42 0 0 chr20 47747174 47747198 -24406684 + (GA)n Simple_repeat Simple_repeat 2 25 0 23632 144 15 20 chr20 47747198 47750304 -24403578 + L1M1 LINE L1 1777 4829 -2736 2487 90 0 0 chr20 47750304 47750615 -24403267 + AluY SINE Alu 1 311 0 23632 144 15 20 chr20 47750615 47752419 -24401463 + L1M1 LINE L1 4829 6641 -924 6411 95 67 38 chr20 47752444 47753262 -24400620 + L1MA3 LINE L1 3845 4637 -1668 1941 134 3 55 chr20 47753262 47753591 -24400291 + AluSx SINE Alu 1 312 0 6411 95 67 38 chr20 47753591 47753912 -24399970 + L1MA3 LINE L1 4637 4947 -1358 1777 149 19 16 chr20 47753912 47754221 -24399661 + AluJb SINE Alu 1 310 -2 6411 95 67 38 chr20 47754221 47754274 -24399608 + L1MA3 LINE L1 4947 6305 0 602 301 107 46 chr20 47754295 47754950 -24398932 - HAL1b LINE L1 -554 794 100 2067 150 0 3 chr20 47755513 47755820 -24398062 - AluSx SINE Alu -6 306 1 2348 107 0 0 chr20 47756321 47756621 -24397261 - AluSx SINE Alu -12 300 1 377 245 10 0 chr20 47756863 47756961 -24396921 + LTR30 LTR ERV1 544 642 -80 2573 67 0 0 chr20 47756961 47757288 -24396594 + pTR5 LTR ERV1 66 392 -2046 1747 156 3 14 chr20 47757812 47758124 -24395758 + AluJo SINE Alu 6 314 0 208 269 65 21 chr20 47758188 47758281 -24395601 + MIR SINE MIR 20 116 -146 261 0 0 0 chr20 47758345 47758374 -24395508 + (A)n Simple_repeat Simple_repeat 1 29 0 1317 228 115 0 chr20 47758404 47758742 -24395140 + MLT1D LTR MaLR 129 505 0 2385 87 3 0 chr20 47758789 47759087 -24394795 - AluSq SINE Alu -14 299 1 379 217 104 9 chr20 47759213 47759319 -24394563 - L2 LINE L2 -1 3312 3197 5215 253 70 72 chr20 47760100 47760878 -24393004 + HAL1 LINE L1 201 979 -1528 1287 170 40 12 chr20 47760878 47761131 -24392751 + L1MB8 LINE L1 5914 6173 -5 5215 253 70 72 chr20 47761131 47761700 -24392182 + HAL1 LINE L1 979 1547 -960 2015 211 119 28 chr20 47761700 47762194 -24391688 - MLT1F LTR MaLR -1 541 3 5215 253 70 72 chr20 47762194 47763154 -24390728 + HAL1 LINE L1 1547 2505 -2 207 100 0 0 chr20 47763568 47763598 -24390284 + (ATG)n Simple_repeat Simple_repeat 1 30 0 578 250 62 0 chr20 47763649 47763809 -24390073 - MIR SINE MIR -64 198 29 1414 191 44 85 chr20 47764019 47764407 -24389475 + MLT1A2 LTR MaLR 3 374 0 196 315 45 34 chr20 47764457 47764546 -24389336 + MIR SINE MIR 2 91 -171 527 261 19 25 chr20 47764688 47764849 -24389033 - MIR SINE MIR -46 216 57 1066 234 64 24 chr20 47764904 47765199 -24388683 + MLT1G LTR MaLR 284 590 0 441 272 0 26 chr20 47765901 47766015 -24387867 - L2 LINE L2 -8 3264 3154 423 317 73 36 chr20 47766332 47766717 -24387165 - L2 LINE L2 -458 2856 2458 844 273 132 40 chr20 47767562 47768100 -24385782 - L2 LINE L2 -5 3308 2716 718 260 30 0 chr20 47768337 47768537 -24385345 - MIR SINE MIR -56 206 1 208 308 0 0 chr20 47768722 47768774 -24385108 + L2 LINE L2 3209 3260 -12 29 78 0 0 chr20 47768913 47768977 -24384905 + AT_rich Low_complexity Low_complexity 1 64 0 234 323 0 31 chr20 47769530 47769626 -24384256 + C-rich Low_complexity Low_complexity 2 94 0 779 180 400 34 chr20 47770446 47770786 -24383096 + MLT1G LTR MaLR 92 590 0 372 342 43 6 chr20 47770925 47771086 -24382796 + MIR SINE MIR 19 185 -77 448 252 223 16 chr20 47771124 47771331 -24382551 + MIR SINE MIR 1 248 -14 415 253 20 67 chr20 47772253 47772403 -24381479 - MIR SINE MIR -40 222 80 413 308 36 54 chr20 47773371 47773595 -24380287 + L2 LINE L2 2830 3049 -223 338 129 16 16 chr20 47773692 47773754 -24380128 + MLT1H LTR MaLR 52 113 -436 301 256 128 38 chr20 47774051 47774184 -24379698 - L2 LINE L2 -10 3303 3159 258 222 37 0 chr20 47774361 47774415 -24379467 - L2 LINE L2 -5 3308 3253 299 326 143 15 chr20 47774476 47774672 -24379210 - MIR SINE MIR -6 256 36 1990 136 13 31 chr20 47774980 47775297 -24378585 - AluJb SINE Alu -1 311 1 541 326 157 34 chr20 47776036 47776450 -24377432 - L2 LINE L2 0 3272 2808 241 241 35 103 chr20 47776491 47776636 -24377246 - L2 LINE L2 -642 2672 2538 865 264 108 10 chr20 47776819 47777133 -24376749 - LTR16C LTR ERVL 0 491 147 385 345 29 19 chr20 47777489 47777695 -24376187 - MIR SINE MIR -3 259 52 1273 204 37 22 chr20 47777760 47778084 -24375798 + L1MC4 LINE L1 7699 8027 -15 244 223 348 27 chr20 47778608 47778720 -24375162 + MIR SINE MIR 22 139 -69 770 264 56 40 chr20 47778733 47779036 -24374846 - L2 LINE L2 0 3313 3006 832 263 140 0 chr20 47779417 47779702 -24374180 + LTR16C LTR ERVL 164 488 -3 377 219 12 12 chr20 47779781 47779863 -24374019 + L2 LINE L2 3226 3307 -6 598 327 44 43 chr20 47781001 47781027 -24372855 - L2 LINE L2 -2 3270 3246 1565 161 10 65 chr20 47781027 47781337 -24372545 + AluJo SINE Alu 3 295 -17 598 327 44 43 chr20 47781337 47781483 -24372399 - L2 LINE L2 -26 3246 3102 2355 224 28 9 chr20 47781483 47782011 -24371871 - MLT1F LTR MaLR 0 542 5 598 327 44 43 chr20 47782011 47782195 -24371687 - L2 LINE L2 -170 3102 2917 205 255 20 0 chr20 47782447 47782498 -24371384 + (TTAGGG)n Simple_repeat Simple_repeat 1 52 0 546 195 11 136 chr20 47782517 47782700 -24371182 + MIR SINE MIR 37 201 -61 331 267 30 20 chr20 47783098 47783199 -24370683 + L2 LINE L2 3169 3270 -43 640 239 71 47 chr20 47783199 47783357 -24370525 + MIR SINE MIR 1 169 -93 2089 115 31 0 chr20 47783357 47783643 -24370239 + AluSq SINE Alu 1 295 -18 640 239 71 47 chr20 47783643 47783739 -24370143 + MIR SINE MIR 169 261 -1 1070 184 304 0 chr20 47785193 47785558 -24368324 + MLT1D LTR MaLR 28 503 -2 883 273 0 0 chr20 47785570 47785768 -24368114 + MIR SINE MIR 52 249 -13 437 311 0 8 chr20 47785877 47786009 -24367873 - L2 LINE L2 -1 3312 3182 29 60 0 0 chr20 47786020 47786070 -24367812 + AT_rich Low_complexity Low_complexity 1 50 0 190 224 207 0 chr20 47786142 47786200 -24367682 - L2 LINE L2 -213 3059 2990 254 239 53 62 chr20 47786516 47786629 -24367253 - MLT1I LTR MaLR -271 138 27 253 250 12 36 chr20 47786872 47786956 -24366926 + L2 LINE L2 3191 3272 0 215 59 0 29 chr20 47787426 47787460 -24366422 + (GAAA)n Simple_repeat Simple_repeat 1 33 0 258 328 55 71 chr20 47788374 47788557 -24365325 - L2 LINE L2 -221 3051 2872 964 191 34 19 chr20 47789425 47789634 -24364248 - MER20 DNA MER1_type 0 219 8 600 143 0 11 chr20 47790042 47790133 -24363749 - 5S rRNA rRNA -31 90 1 517 247 38 70 chr20 47790133 47790224 -24363658 + L2 LINE L2 2898 2981 -291 240 100 0 0 chr20 47790224 47790264 -24363618 + (CA)n Simple_repeat Simple_repeat 2 41 0 517 247 38 70 chr20 47790264 47790358 -24363524 + L2 LINE L2 2981 3077 -195 400 299 69 88 chr20 47790651 47790855 -24363027 - MIR SINE MIR -62 200 1 475 150 0 0 chr20 47791748 47791828 -24362054 + MIR SINE MIR 72 151 -111 274 347 147 16 chr20 47792019 47792375 -24361507 - L2 LINE L2 -221 3051 2658 1965 114 55 81 chr20 47792927 47793312 -24360570 + THE1C LTR MaLR 1 375 0 190 271 43 29 chr20 47794941 47795011 -24358871 + MIR SINE MIR 79 149 -113 337 222 71 10 chr20 47796478 47796577 -24357305 - MIR SINE MIR -78 184 80 254 293 152 12 chr20 47796625 47796789 -24357093 - MIR SINE MIR -48 214 28 597 308 90 5 chr20 47796799 47797010 -24356872 + MIR SINE MIR 9 237 -25 1107 239 85 10 chr20 47797709 47798098 -24355784 + LTR16C LTR ERVL 74 491 0 203 254 15 60 chr20 47798184 47798251 -24355631 - L2 LINE L2 -21 3292 3229 479 219 71 15 chr20 47798819 47798964 -24354918 - MIR SINE MIR -48 214 64 755 268 46 61 chr20 47799226 47799379 -24354503 + L2 LINE L2 2912 3066 -247 1684 191 83 31 chr20 47799379 47799823 -24354059 + MLT1C LTR MaLR 1 467 0 755 268 46 61 chr20 47799823 47800061 -24353821 + L2 LINE L2 3066 3297 -16 * 1051 276 76 61 chr20 47800059 47800534 -24353348 - L2 LINE L2 -1 3312 2831 323 188 20 0 chr20 47800554 47800655 -24353227 + (TGGA)n Simple_repeat Simple_repeat 2 104 0 1067 284 133 51 chr20 47801455 47802065 -24351817 + L2 LINE L2 1945 2604 -710 1311 142 26 17 chr20 47802337 47802570 -24351312 + MER46A DNA MER2_type 1 235 -1 392 273 196 7 chr20 47803075 47803218 -24350664 - MER5B DNA MER1_type -6 172 3 736 247 52 56 chr20 47803384 47803635 -24350247 - MIR SINE MIR -5 257 8 327 296 35 35 chr20 47803716 47803831 -24350051 - MER5A DNA MER1_type -68 121 7 535 218 89 0 chr20 47803850 47803974 -24349908 + MLT1F LTR MaLR 1 135 -432 972 208 14 23 chr20 47804078 47804293 -24349589 + MLT1F LTR MaLR 151 363 -179 347 132 19 0 chr20 47804293 47804346 -24349536 - MER94 DNA DNA 0 134 81 350 291 48 0 chr20 47804442 47804545 -24349337 - L2 LINE L2 -514 2800 2693 193 308 118 35 chr20 47805016 47805185 -24348697 - MIR SINE MIR -34 228 46 842 215 59 19 chr20 47806140 47806400 -24347482 - MLT1C LTR MaLR -1 466 176 200 97 32 0 chr20 47806401 47806432 -24347450 + (TG)n Simple_repeat Simple_repeat 1 32 0 1209 189 23 108 chr20 47806439 47806745 -24347137 - AluYb8 SINE Alu -38 280 1 1003 129 12 6 chr20 47806745 47806915 -24346967 - MLT1C LTR MaLR -281 186 16 342 279 202 0 chr20 47806981 47807110 -24346772 - L2 LINE L2 -2 3270 3116 411 297 70 58 chr20 47807593 47807852 -24346030 + L2 LINE L2 3010 3271 -1 207 374 56 0 chr20 47808501 47808608 -24345274 + MIR3 SINE MIR 43 155 -53 475 233 102 84 chr20 47808719 47808816 -24345066 - MER20 DNA MER1_type 0 219 125 2363 56 6 38 chr20 47808816 47809135 -24344747 - AluY SINE Alu -1 310 2 475 233 102 84 chr20 47809135 47809252 -24344630 - MER20 DNA MER1_type -94 125 1 371 279 44 44 chr20 47809331 47809467 -24344415 - L2 LINE L2 0 3313 3178 2558 134 86 42 chr20 47809493 47809972 -24343910 + MLT1D LTR MaLR 4 503 -2 626 305 36 12 chr20 47810024 47810191 -24343691 + MER91A DNA MER1_type 1 171 -25 221 284 40 54 chr20 47810211 47810285 -24343597 + MER91 DNA MER1_type 124 190 0 * 448 322 84 34 chr20 47810285 47810374 -24343508 - L2 LINE L2 -191 3081 2998 2067 91 0 45 chr20 47810374 47810660 -24343222 + AluSx SINE Alu 21 293 -19 448 322 84 34 chr20 47810660 47810913 -24342969 - L2 LINE L2 -274 2998 2249 1407 161 16 81 chr20 47812176 47812498 -24341384 + AluJo SINE Alu 5 305 -7 189 362 0 0 chr20 47812812 47812870 -24341012 - L3 LINE CR1 -107 1470 1413 220 235 20 0 chr20 47812913 47812964 -24340918 + (TATATG)n Simple_repeat Simple_repeat 2 53 0 680 292 63 34 chr20 47813228 47813559 -24340323 + L1ME4a LINE L1 5278 5614 -507 833 231 49 61 chr20 47813595 47814002 -24339880 + L1MC5 LINE L1 7487 7888 -73 3171 85 14 2 chr20 47814114 47814551 -24339331 + L1PA5 LINE L1 5712 6153 -1 2610 88 21 29 chr20 47814555 47814587 -24339295 + L1PB1 LINE L1 5769 5800 -351 306 0 0 0 chr20 47814587 47814621 -24339261 + (CA)n Simple_repeat Simple_repeat 2 35 0 2610 88 21 29 chr20 47814621 47814974 -24338908 + L1PB1 LINE L1 5800 6151 0 562 244 152 32 chr20 47815028 47815376 -24338506 + L1ME4a LINE L1 5663 6052 -69 287 214 0 0 chr20 47815747 47815803 -24338079 + L1ME4a LINE L1 6064 6119 -2 606 325 129 30 chr20 47815835 47816207 -24337675 - L3 LINE CR1 -195 1382 974 1830 204 279 5 chr20 47816221 47816845 -24337037 + LTR50 LTR ERVL 1 795 0 550 287 126 18 chr20 47816845 47817068 -24336814 - L3 LINE CR1 -685 892 646 2052 127 38 0 chr20 47817091 47817383 -24336499 + AluSx SINE Alu 4 306 -6 2020 121 16 47 chr20 47818476 47818798 -24335084 - AluJb SINE Alu 0 312 1 303 246 52 19 chr20 47818983 47819087 -24334795 + MLT1J2 LTR MaLR 56 194 -295 2435 166 35 13 chr20 47819403 47819860 -24334022 - MLT1C LTR MaLR 0 467 1 198 299 65 26 chr20 47820243 47820320 -24333562 + MIR SINE MIR 22 101 -161 451 273 59 55 chr20 47820640 47820811 -24333071 - MIR SINE MIR -61 147 2 212 261 203 14 chr20 47821604 47821742 -24332140 + L2 LINE L2 2810 2973 -299 638 260 72 6 chr20 47822501 47822682 -24331200 + MIR SINE MIR 2 194 -68 440 202 11 11 chr20 47822687 47822776 -24331106 - MER81 DNA DNA 0 114 26 273 75 0 0 chr20 47822786 47822826 -24331056 + (GA)n Simple_repeat Simple_repeat 1 40 0 244 331 0 23 chr20 47823410 47823543 -24330339 + C-rich Low_complexity Low_complexity 5 134 0 1892 139 0 22 chr20 47824371 47824687 -24329195 + AluSx SINE Alu 1 309 -3 2595 90 40 11 chr20 47825173 47825527 -24328355 - THE1B LTR MaLR 0 364 1 410 235 72 65 chr20 47825546 47825699 -24328183 - MER103 DNA DNA -3 163 10 543 303 7 0 chr20 47825750 47825905 -24327977 - MIR SINE MIR -50 212 57 285 320 10 0 chr20 47826571 47826674 -24327208 + MLT1L LTR MaLR 512 615 0 252 323 81 10 chr20 47826921 47827020 -24326862 - MIR SINE MIR -138 124 19 276 269 134 15 chr20 47827484 47827618 -24326264 + MIR SINE MIR 86 235 -27 479 294 118 12 chr20 47828058 47828228 -24325654 - MIR SINE MIR -57 205 18 652 262 23 78 chr20 47828370 47828626 -24325256 - LTR16A1 LTR ERVL 0 457 216 23 33 0 0 chr20 47829161 47829191 -24324691 + AT_rich Low_complexity Low_complexity 1 30 0 195 370 11 11 chr20 47830065 47830157 -24323725 - MIR SINE MIR -15 247 156 799 267 126 29 chr20 47830192 47830311 -24323571 + MLT1J2 LTR MaLR 67 173 -277 1063 252 5 0 chr20 47830311 47830533 -24323349 - MER58A DNA MER1_type -1 223 1 799 267 126 29 chr20 47830533 47830761 -24323121 + MLT1J2 LTR MaLR 173 448 -2 395 162 27 14 chr20 47830864 47830938 -24322944 - MER81 DNA DNA 0 114 40 277 206 59 15 chr20 47830938 47831006 -24322876 - MIR SINE MIR -170 92 22 409 278 15 15 chr20 47831514 47831607 -24322275 - L2 LINE L2 -254 3059 2964 1615 148 55 14 chr20 47831607 47831898 -24321984 + AluJb SINE Alu 1 303 -9 409 278 15 15 chr20 47831898 47831937 -24321945 - L2 LINE L2 -348 2965 2927 267 350 39 17 chr20 47832037 47832217 -24321665 - L2 LINE L2 -1230 2084 1901 198 229 114 43 chr20 47832216 47832286 -24321596 - L2 LINE L2 -13 3300 3226 * 216 311 178 22 chr20 47832351 47832576 -24321306 - L2 LINE L2 -177 3095 2836 636 237 0 0 chr20 47832687 47832818 -24321064 + FLAM_A SINE Alu 12 142 0 360 288 110 20 chr20 47832833 47832979 -24320903 + MIR3 SINE MIR 50 208 0 236 280 193 49 chr20 47833510 47833753 -24320129 - L2 LINE L2 -401 2913 2636 403 177 101 0 chr20 47833763 47833842 -24320040 + Charlie5 DNA MER1_type 1 87 -2525 1863 176 23 9 chr20 47833870 47834216 -24319666 - L1PB4 LINE L1 -5 6151 5801 29 0 0 0 chr20 47834223 47834252 -24319630 + AT_rich Low_complexity Low_complexity 1 29 0 1648 188 21 18 chr20 47834263 47834651 -24319231 + Charlie5 DNA MER1_type 2236 2624 0 761 284 74 66 chr20 47834657 47834938 -24318944 - L2 LINE L2 -710 2604 2318 2125 114 0 0 chr20 47834938 47835228 -24318654 + AluSx SINE Alu 1 290 -22 761 284 74 66 chr20 47835228 47835323 -24318559 - L2 LINE L2 -996 2318 2225 201 74 0 0 chr20 47835364 47835391 -24318491 + (CAGA)n Simple_repeat Simple_repeat 4 30 0 536 275 35 0 chr20 47836165 47836307 -24317575 + MIR SINE MIR 9 155 -107 285 22 44 0 chr20 47836438 47836483 -24317399 - L1MB2 LINE L1 0 6171 6125 562 261 199 23 chr20 47836487 47836793 -24317089 + LTR16A1 LTR ERVL 58 417 -40 1780 154 33 13 chr20 47836824 47837130 -24316752 - AluJo SINE Alu 0 312 1 356 121 45 30 chr20 47837130 47837196 -24316686 + MLT1H LTR MaLR 483 549 0 317 296 79 69 chr20 47837213 47837329 -24316553 + L1ME4a LINE L1 5794 5907 -214 2130 125 3 3 chr20 47837329 47837640 -24316242 - AluSx SINE Alu -1 311 1 317 296 79 69 chr20 47837640 47837800 -24316082 + L1ME4a LINE L1 5907 6073 -48 2071 122 0 7 chr20 47837864 47838160 -24315722 - AluSx SINE Alu -18 294 1 729 135 12 0 chr20 47838161 47838281 -24315601 - L1MB2 LINE L1 -52 6119 5999 584 283 31 31 chr20 47838315 47838506 -24315376 - L2 LINE L2 -5 3308 3118 778 269 14 36 chr20 47838522 47838741 -24315141 - MIR SINE MIR -16 246 33 1268 251 70 50 chr20 47838777 47839010 -24314872 - L2 LINE L2 0 3313 3086 2304 102 0 0 chr20 47839010 47839315 -24314567 - AluSx SINE Alu -7 305 1 1268 251 70 50 chr20 47839315 47839630 -24314252 - L2 LINE L2 -227 3086 2749 2928 139 42 4 chr20 47839630 47840111 -24313771 + L1MC2 LINE L1 5845 6343 -1 1268 251 70 50 chr20 47840111 47840373 -24313509 - L2 LINE L2 -564 2749 2494 409 237 107 15 chr20 47840799 47840930 -24312952 - MIR3 SINE MIR -33 175 33 1364 205 82 27 chr20 47840958 47841379 -24312503 - MLT1C LTR MaLR 0 467 18 2411 231 26 17 chr20 47841542 47842127 -24311755 + MLT1E LTR MaLR 1 590 -3 341 270 57 50 chr20 47842140 47842299 -24311583 + L2 LINE L2 2381 2540 -774 1672 187 0 10 chr20 47842462 47842767 -24311115 + AluJo SINE Alu 1 302 -10 294 29 0 0 chr20 47842903 47842938 -24310944 + (CA)n Simple_repeat Simple_repeat 1 35 0 239 280 110 8 chr20 47843557 47843675 -24310207 + L2 LINE L2 2538 2667 -647 276 257 92 66 chr20 47843819 47843971 -24309911 + L2 LINE L2 2906 3061 -211 182 390 57 8 chr20 47844059 47844182 -24309700 + L3 LINE CR1 1404 1532 -45 1579 240 135 16 chr20 47844213 47844562 -24309320 - MLT1H1 LTR MaLR 0 555 130 2089 120 0 3 chr20 47844562 47844862 -24309020 + AluSc SINE Alu 1 299 -10 1579 240 135 16 chr20 47844862 47845000 -24308882 - MLT1H1 LTR MaLR -425 130 10 264 247 10 41 chr20 47845053 47845150 -24308732 + MLT1F1 LTR MaLR 444 537 -30 1447 118 9 5 chr20 47845150 47845370 -24308512 - AluSx SINE Alu -19 293 73 4094 128 15 143 chr20 47845370 47847065 -24306817 - pTR5 LTR ERV1 0 2606 1524 3871 146 105 28 chr20 47847061 47848292 -24305590 + pTR5 LTR ERV1 890 2606 0 * 545 62 0 0 chr20 47848292 47848357 -24305525 - AluSx SINE Alu -237 76 12 357 302 12 0 chr20 47848588 47848674 -24305208 - L2 LINE L2 -12 3260 3174 1968 110 7 3 chr20 47848772 47849072 -24304810 + AluSq SINE Alu 13 313 0 202 274 83 36 chr20 47850152 47850236 -24303646 - L3 LINE CR1 -1074 503 416 865 204 30 12 chr20 47850646 47850813 -24303069 - MER20 DNA MER1_type -19 200 31 674 142 24 65 chr20 47850820 47850989 -24302893 - MER53 DNA DNA -3 186 25 27 0 0 0 chr20 47851239 47851266 -24302616 + AT_rich Low_complexity Low_complexity 1 27 0 845 136 0 0 chr20 47851279 47851411 -24302471 + FLAM_C SINE Alu 9 140 -3 294 365 79 0 chr20 47851570 47851748 -24302134 - L3 LINE CR1 -1072 505 314 339 283 33 33 chr20 47851819 47851999 -24301883 + L1P LINE L1 4916 5095 -1051 1056 279 113 17 chr20 47852164 47852687 -24301195 + L1MC4a LINE L1 5338 5910 -1898 2645 186 43 54 chr20 47852905 47853108 -24300774 + L1ME4a LINE L1 4847 5051 -1070 3520 13 0 0 chr20 47853108 47853484 -24300398 + L1PA3 LINE L1 5762 6152 -3 2645 186 43 54 chr20 47853484 47853794 -24300088 + L1ME4a LINE L1 5051 5363 -758 2034 100 10 30 chr20 47853794 47854095 -24299787 + AluSc SINE Alu 1 295 -14 2645 186 43 54 chr20 47854095 47854562 -24299320 + L1ME4a LINE L1 5363 5855 -266 1616 207 0 0 chr20 47854562 47854857 -24299025 + AluJb SINE Alu 1 295 -17 2645 186 43 54 chr20 47854857 47855117 -24298765 + L1ME4a LINE L1 5855 6116 -5 24 0 0 0 chr20 47855581 47855605 -24298277 + AT_rich Low_complexity Low_complexity 1 24 0 1830 151 3 22 chr20 47855614 47855933 -24297949 + AluSq SINE Alu 1 313 0 418 337 44 8 chr20 47855938 47856190 -24297692 - MIR SINE MIR 0 262 2 239 267 12 35 chr20 47856507 47856593 -24297289 + LTR67 LTR ERVL 470 553 -4 274 154 19 0 chr20 47856598 47856650 -24297232 + L1MD2 LINE L1 5254 5306 -936 * 6788 184 38 30 chr20 47856646 47857187 -24296695 + L1MB7 LINE L1 3728 4263 -1921 1603 192 6 6 chr20 47857187 47857499 -24296383 + AluJb SINE Alu 1 312 0 6788 184 38 30 chr20 47857499 47858398 -24295484 + L1MB7 LINE L1 4263 5154 -1030 1964 149 0 0 chr20 47858398 47858699 -24295183 + AluSg SINE Alu 1 301 -9 6788 184 38 30 chr20 47858699 47859202 -24294680 + L1MB7 LINE L1 5154 5652 -532 2145 102 3 22 chr20 47859202 47859515 -24294367 + AluSq SINE Alu 1 307 -6 6788 184 38 30 chr20 47859515 47860011 -24293871 + L1MB7 LINE L1 5652 6184 0 1868 163 3 3 chr20 47860041 47860367 -24293515 + L1MD2 LINE L1 5283 5608 -634 353 120 4 110 chr20 47860368 47860628 -24293254 + AluSq SINE Alu 2 294 -6 3582 174 47 30 chr20 47860628 47861368 -24292514 + L1MD2 LINE L1 5606 6358 -1 2110 106 0 0 chr20 47861385 47861694 -24292188 + AluSg SINE Alu 1 309 0 296 151 57 0 chr20 47861808 47861861 -24292021 - MIR SINE MIR -97 165 110 2265 222 42 35 chr20 47862649 47863361 -24290521 + L1MC4a LINE L1 5279 5344 -802 397 293 28 65 chr20 47863563 47863763 -24290119 + L2 LINE L2 2791 2974 -298 2223 91 0 3 chr20 47863763 47864060 -24289822 - AluSg SINE Alu -14 296 1 397 293 28 65 chr20 47864060 47864187 -24289695 + L2 LINE L2 2974 3104 -168 283 180 54 90 chr20 47864413 47864457 -24289425 - MER103 DNA DNA -52 114 70 1697 174 48 22 chr20 47864457 47864813 -24289069 - MLT1A1 LTR MaLR 0 365 1 283 180 54 90 chr20 47864813 47864879 -24289003 - MER103 DNA DNA -96 70 8 2008 120 24 0 chr20 47865002 47865293 -24288589 + AluSx SINE Alu 1 298 -14 206 183 183 92 chr20 47867244 47867375 -24286507 - MIR SINE MIR -111 151 9 472 270 73 39 chr20 47867941 47868119 -24285763 + MIR SINE MIR 79 262 0 180 169 91 117 chr20 47868846 47868923 -24284959 - MIR SINE MIR -70 192 118 1803 175 7 0 chr20 47868943 47869252 -24284630 - AluJb SINE Alu -1 311 1 302 224 106 112 chr20 47869263 47869433 -24284449 - L2 LINE L2 -1 3312 3144 464 256 183 40 chr20 47869464 47869737 -24284145 + MLT1H LTR MaLR 1 312 -237 738 319 63 19 chr20 47869912 47870387 -24283495 - L2 LINE L2 -228 3044 2550 801 169 0 0 chr20 47870393 47870517 -24283365 + FLAM_C SINE Alu 2 125 -18 341 219 14 0 chr20 47870579 47870652 -24283230 + L1ME1 LINE L1 4822 4895 -1251 1675 138 0 64 chr20 47870712 47871009 -24282873 + AluSx SINE Alu 3 280 -32 22 0 0 0 chr20 47871013 47871035 -24282847 + AT_rich Low_complexity Low_complexity 1 22 0 4373 156 24 26 chr20 47871038 47871962 -24281920 + L1MB8 LINE L1 5128 6037 -141 1009 133 53 27 chr20 47872061 47872249 -24281633 - L1PA16 LINE L1 -6 6160 5968 648 135 20 101 chr20 47872267 47872415 -24281467 + L1MB7 LINE L1 6040 6175 -9 * 1419 201 33 28 chr20 47872412 47872864 -24281018 + L1ME1 LINE L1 4985 5441 -725 1419 224 16 43 chr20 47872864 47873404 -24280478 + L1ME1 LINE L1 5654 6178 0 456 313 44 40 chr20 47873406 47873678 -24280204 - L2 LINE L2 -797 2517 2245 2048 130 0 27 chr20 47873690 47873989 -24279893 + AluSx SINE Alu 1 291 -21 400 299 45 26 chr20 47874606 47874760 -24279122 - MIR SINE MIR -31 231 75 3122 150 36 42 chr20 47875474 47876088 -24277794 - L1MA9 LINE L1 0 6312 5703 854 101 36 14 chr20 47876088 47876227 -24277655 + L1MA9 LINE L1 5562 5703 -609 216 341 22 11 chr20 47876235 47876322 -24277560 - L2 LINE L2 -78 3194 3107 546 207 69 109 chr20 47876322 47876378 -24277504 + MER5B DNA MER1_type 3 60 -118 1876 114 68 0 chr20 47876378 47876641 -24277241 + AluSx SINE Alu 5 285 -27 414 53 0 0 chr20 47876641 47876698 -24277184 + (CA)n Simple_repeat Simple_repeat 2 58 0 546 207 69 109 chr20 47876698 47876814 -24277068 + MER5B DNA MER1_type 58 169 -9 805 153 204 0 chr20 47877010 47877167 -24276715 - MER5A DNA MER1_type 0 189 1 820 201 19 0 chr20 47877448 47877602 -24276280 + MER5A DNA MER1_type 33 189 0 569 242 131 29 chr20 47877689 47877911 -24275971 - MIR SINE MIR 0 262 22 1998 128 155 11 chr20 47877925 47878299 -24275583 - MSTA LTR MaLR 0 428 1 718 211 23 0 chr20 47878656 47878784 -24275098 + FRAM SINE Alu 1 131 -45 364 240 0 0 chr20 47879047 47879122 -24274760 - MER81 DNA DNA 0 114 40 394 175 82 10 chr20 47879282 47879379 -24274503 - MLT1A1 LTR MaLR 0 374 271 534 216 54 48 chr20 47879394 47879561 -24274321 - MLT1A1 LTR MaLR -197 168 1 435 306 140 5 chr20 47880087 47880273 -24273609 + MIR SINE MIR 52 262 0 740 166 166 53 chr20 47880412 47880659 -24273223 - ORSL DNA AcHobo 0 275 1 2427 88 10 0 chr20 47880690 47880998 -24272884 + AluSx SINE Alu 1 311 -1 399 315 175 2 chr20 47880998 47881403 -24272479 + L2 LINE L2 2538 3021 -251 201 181 0 169 chr20 47881455 47881538 -24272344 + L2 LINE L2 3164 3232 -40 218 235 62 74 chr20 47881894 47881975 -24271907 + MIR3 SINE MIR 109 188 -20 280 283 24 122 chr20 47882944 47883149 -24270733 - MIR SINE MIR -70 192 8 287 259 30 137 chr20 47883198 47883267 -24270615 - MER5B DNA MER1_type -2 176 126 2290 90 10 13 chr20 47883267 47883567 -24270315 + AluSc SINE Alu 1 299 -10 287 259 30 137 chr20 47883567 47883628 -24270254 - MER5B DNA MER1_type -52 126 60 1373 152 15 0 chr20 47883633 47883837 -24270045 - AluJb SINE Alu -20 292 86 226 264 0 0 chr20 47883860 47883913 -24269969 + MER5B DNA MER1_type 125 177 -1 192 340 96 0 chr20 47884018 47884112 -24269770 + MIR SINE MIR 154 256 -6 3790 144 5 5 chr20 47884160 47884784 -24269098 - MER41B LTR ERV1 -9 626 3 1109 282 49 6 chr20 47885453 47885801 -24268081 + LTR16C LTR ERVL 94 456 -35 468 289 70 35 chr20 47885897 47886125 -24267757 + MIR SINE MIR 20 255 -7 1304 113 5 0 chr20 47886313 47886507 -24267375 - MER3 DNA MER1_type 0 209 15 332 285 45 50 chr20 47886526 47886705 -24267177 + MIR SINE MIR 47 224 -38 2537 148 43 19 chr20 47887042 47887508 -24266374 + L1MC1 LINE L1 5857 6333 0 631 298 26 26 chr20 47888513 47888704 -24265178 - L2 LINE L2 -1 3271 3081 873 255 10 15 chr20 47888778 47888878 -24265004 + MIR SINE MIR 55 154 -108 1998 157 7 3 chr20 47888878 47889177 -24264705 + AluJo SINE Alu 1 300 -12 873 255 10 15 chr20 47889177 47889280 -24264602 + MIR SINE MIR 154 257 -5 424 306 114 33 chr20 47889333 47889613 -24264269 - L2 LINE L2 -181 3091 2776 2187 218 86 35 chr20 47889664 47890186 -24263696 + MLT1H LTR MaLR 1 549 0 239 231 46 0 chr20 47890218 47890283 -24263599 + GA-rich Low_complexity Low_complexity 4 71 0 435 251 214 0 chr20 47891027 47891214 -24262668 - LTR33 LTR ERVL 0 521 295 613 224 98 15 chr20 47891240 47891445 -24262437 - LTR33 LTR ERVL -298 223 2 938 187 12 0 chr20 47891581 47891747 -24262135 + Charlie1 DNA MER1_type 1 168 -2593 * 1380 176 111 41 chr20 47891745 47891888 -24261994 + Charlie1 DNA MER1_type 2308 2440 -321 2078 118 10 10 chr20 47891888 47892193 -24261689 + AluSx SINE Alu 1 305 -7 1380 176 111 41 chr20 47892193 47892465 -24261417 + Charlie1 DNA MER1_type 2440 2752 -9 466 321 12 0 chr20 47892471 47892633 -24261249 - MIR SINE MIR -77 185 22 411 169 56 0 chr20 47893219 47893308 -24260574 - MER53 DNA DNA 0 189 96 2137 104 0 7 chr20 47893876 47894163 -24259719 + AluSx SINE Alu 21 305 -7 200 33 0 33 chr20 47894431 47894461 -24259421 + (TTA)n Simple_repeat Simple_repeat 1 29 0 1024 190 10 15 chr20 47894490 47894695 -24259187 - MER20 DNA MER1_type 0 219 16 2282 120 0 0 chr20 47894984 47895292 -24258590 - AluSx SINE Alu -4 308 1 261 139 0 0 chr20 47895324 47895367 -24258515 + (GGGGA)n Simple_repeat Simple_repeat 3 45 0 1208 91 6 0 chr20 47895374 47895403 -24258479 + (GGAA)n Simple_repeat Simple_repeat 1 206 0 1208 91 6 0 chr20 47895403 47895579 -24258303 + (GGAA)n Simple_repeat Simple_repeat 2 178 0 187 333 64 0 chr20 47895647 47895725 -24258157 + MIR3 SINE MIR 104 186 -22 200 59 29 0 chr20 47896303 47896337 -24257545 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 192 152 0 0 chr20 47896869 47896902 -24256980 + G-rich Low_complexity Low_complexity 3 35 0 206 250 0 0 chr20 47897607 47897659 -24256223 + A-rich Low_complexity Low_complexity 1 52 0 271 317 112 43 chr20 47897808 47897969 -24255913 - MIR SINE MIR -44 218 47 465 211 62 31 chr20 47898148 47898276 -24255606 - MIR SINE MIR -71 191 60 658 264 148 14 chr20 47898438 47898654 -24255228 + MIR SINE MIR 13 257 -5 199 256 100 11 chr20 47898922 47899012 -24254870 + L3 LINE CR1 1430 1527 -50 647 299 47 5 chr20 47899212 47899423 -24254459 - MIR SINE MIR -34 228 9 428 327 89 41 chr20 47899520 47899789 -24254093 - L2 LINE L2 -14 3258 2977 299 262 36 0 chr20 47900033 47900117 -24253765 - L1M1 LINE L1 -515 5787 5701 2322 114 0 0 chr20 47900237 47900535 -24253347 - AluSx SINE Alu -14 298 1 4313 102 84 16 chr20 47900937 47901614 -24252268 - L1PA13 LINE L1 0 6163 5441 421 294 38 87 chr20 47902511 47902776 -24251106 + L2 LINE L2 3015 3266 -6 965 158 169 18 chr20 47903602 47903880 -24250002 - MER33 DNA MER1_type 0 324 5 407 230 89 37 chr20 47906812 47906974 -24246908 + MIR SINE MIR 88 258 -4 202 318 16 0 chr20 47907131 47907194 -24246688 + L3b LINE CR1 1195 1258 -325 211 308 19 0 chr20 47907358 47907410 -24246472 + MIR SINE MIR 48 100 -162 24 53 0 0 chr20 47908219 47908257 -24245625 + AT_rich Low_complexity Low_complexity 1 38 0 636 240 61 31 chr20 47910176 47910372 -24243510 - MER63A DNA MER1_type -8 202 1 277 293 156 18 chr20 47910740 47910907 -24242975 + MIR3 SINE MIR 11 200 -8 694 277 23 18 chr20 47911151 47911371 -24242511 + MIR SINE MIR 28 248 -14 266 253 189 21 chr20 47912231 47912326 -24241556 + L3 LINE CR1 448 558 -1019 517 143 0 33 chr20 47912367 47912458 -24241424 - FRAM SINE Alu -18 158 71 215 319 103 34 chr20 47913031 47913173 -24240709 + L2 LINE L2 2977 3132 -140 547 272 19 32 chr20 47913173 47913331 -24240551 + MER5A DNA MER1_type 1 156 -33 541 325 76 5 chr20 47913332 47913589 -24240293 - L2 LINE L2 -280 3033 2747 1352 187 47 63 chr20 47913625 47913802 -24240080 - AluJo SINE Alu -18 294 123 207 0 0 0 chr20 47913802 47913825 -24240057 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1352 187 47 63 chr20 47913825 47913946 -24239936 - AluJo SINE Alu -189 123 1 282 266 26 44 chr20 47914237 47914350 -24239532 + MLT1H LTR MaLR 416 526 -23 988 230 22 173 chr20 47914381 47914977 -24238905 - L2 LINE L2 -571 2743 2238 385 290 311 20 chr20 47915009 47915257 -24238625 + L2 LINE L2 2932 3251 -21 287 309 159 12 chr20 47915276 47915474 -24238408 - MIR SINE MIR -38 224 3 283 250 40 13 chr20 47916072 47916148 -24237734 + MIR SINE MIR 88 165 -97 362 287 143 23 chr20 47916680 47916896 -24236986 + MLT1J2 LTR MaLR 203 444 -6 233 301 106 92 chr20 47917234 47917526 -24236356 + MLT1K LTR MaLR 149 444 -144 356 267 29 0 chr20 47918322 47918427 -24235455 + L2 LINE L2 2828 2935 -378 2059 214 60 27 chr20 47918427 47918942 -24234940 - MLT1F LTR MaLR 0 542 11 452 285 85 30 chr20 47918952 47919152 -24234730 + L2 LINE L2 2931 3141 -172 441 185 43 0 chr20 47919173 47919265 -24234617 - L1MD3 LINE L1 -10 7985 7890 729 214 13 13 chr20 47919287 47919446 -24234436 + L2 LINE L2 3154 3312 -1 201 313 0 16 chr20 47920171 47920235 -24233647 - MIR SINE MIR -10 252 190 215 205 0 0 chr20 47920420 47920459 -24233423 - MIR SINE MIR -65 143 105 392 218 113 32 chr20 47920560 47920684 -24233198 + MER5B DNA MER1_type 25 158 -20 483 339 60 0 chr20 47921278 47921461 -24232421 - MIR SINE MIR -21 241 48 2963 158 45 2 chr20 47921677 47922234 -24231648 - L1MC1 LINE L1 -50 6283 5703 265 283 75 9 chr20 47922692 47922798 -24231084 - L2 LINE L2 -1303 2011 1899 379 323 106 0 chr20 47922926 47923087 -24230795 - MIR SINE MIR -54 208 31 520 330 10 21 chr20 47923439 47923633 -24230249 - MIR SINE MIR -25 237 46 499 307 55 0 chr20 47924707 47924870 -24229012 + MIR SINE MIR 20 191 -71 201 147 0 0 chr20 47925324 47925358 -24228524 + (A)n Simple_repeat Simple_repeat 1 34 0 508 203 68 68 chr20 47925521 47925684 -24228198 - MIR SINE MIR -34 228 66 974 154 15 77 chr20 47926027 47926157 -24227725 + MER5A DNA MER1_type 7 124 -65 2051 98 0 14 chr20 47926157 47926494 -24227388 - AluSx SINE Alu 0 333 1 974 154 15 77 chr20 47926494 47926557 -24227325 + MER5A DNA MER1_type 124 189 0 439 317 0 8 chr20 47927284 47927404 -24226478 + MIR SINE MIR 21 139 -123 888 260 19 10 chr20 47927890 47928098 -24225784 + MIR SINE MIR 47 256 -6 511 326 17 13 chr20 47929142 47929372 -24224510 + MLT1H LTR MaLR 75 305 -244 730 101 0 0 chr20 47929510 47929609 -24224273 - L1PA10 LINE L1 -10 6158 6060 1981 132 0 0 chr20 47929634 47929941 -24223941 + AluSx SINE Alu 1 307 0 448 272 68 20 chr20 47929977 47930124 -24223758 + MER5A DNA MER1_type 36 189 0 475 243 36 0 chr20 47930317 47930457 -24223425 + L1MA10 LINE L1 6183 6327 -7 446 260 47 0 chr20 47930799 47930926 -24222956 - MIR SINE MIR -117 145 13 490 277 88 22 chr20 47931094 47931231 -24222651 - MIR SINE MIR -70 192 47 250 299 247 0 chr20 47931255 47931352 -24222530 - MER5A DNA MER1_type -12 177 57 213 39 0 0 chr20 47931358 47931384 -24222498 + (TTG)n Simple_repeat Simple_repeat 3 28 0 805 84 0 0 chr20 47933036 47933143 -24220739 + AluSc SINE Alu 187 293 -16 197 139 23 0 chr20 47933633 47933676 -24220206 + (CACCAT)n Simple_repeat Simple_repeat 6 49 0 1043 196 36 32 chr20 47933693 47933913 -24219969 - MIR SINE MIR -28 234 14 319 146 134 49 chr20 47935123 47935205 -24218677 + L2 LINE L2 3225 3313 0 1850 141 67 28 chr20 47935211 47935572 -24218310 - THE1C LTR MaLR 0 375 1 222 209 0 0 chr20 47936104 47936147 -24217735 + MIR SINE MIR 117 159 -103 717 214 0 38 chr20 47936665 47936824 -24217058 + MIR SINE MIR 110 262 0 574 199 48 65 chr20 47936760 47936946 -24216936 - MIR SINE MIR -50 212 30 * 469 234 196 0 chr20 47937279 47937437 -24216445 + MIR SINE MIR 68 256 -6 205 255 0 0 chr20 47938673 47938724 -24215158 + GA-rich Low_complexity Low_complexity 6 56 0 1349 257 48 6 chr20 47938760 47939095 -24214787 - LTR16C LTR ERVL -9 482 134 288 263 13 13 chr20 47939199 47939275 -24214607 - MIR SINE MIR -110 152 77 195 256 0 0 chr20 47939479 47939518 -24214364 + L2 LINE L2 3222 3260 -12 196 275 204 14 chr20 47939647 47939789 -24214093 - L2 LINE L2 -300 2972 2804 263 250 56 9 chr20 47939981 47940089 -24213793 + L1MC4a LINE L1 5870 5982 -1826 262 250 42 0 chr20 47940477 47940573 -24213309 - L1ME4a LINE L1 -3 6118 6019 571 286 129 15 chr20 47940624 47940893 -24212989 - L1ME4a LINE L1 -197 5924 5610 2334 88 3 0 chr20 47940893 47941198 -24212684 - AluSp SINE Alu -6 307 2 571 286 129 15 chr20 47941198 47941253 -24212629 - L1ME4a LINE L1 -511 5610 5563 1090 177 56 0 chr20 47941286 47941484 -24212398 - MER3 DNA MER1_type 0 209 1 1619 253 36 47 chr20 47941487 47942238 -24211644 - L2 LINE L2 -113 3200 2460 216 296 0 0 chr20 47943471 47943525 -24210357 + GA-rich Low_complexity Low_complexity 1 54 0 306 0 0 0 chr20 47943615 47943649 -24210233 + (TG)n Simple_repeat Simple_repeat 2 35 0 261 196 0 0 chr20 47943650 47943706 -24210176 + GA-rich Low_complexity Low_complexity 2 57 0 1613 244 43 17 chr20 47943769 47944191 -24209691 - LTR16A LTR ERVL 0 450 18 848 288 118 22 chr20 47944668 47945168 -24208714 + L2 LINE L2 2233 2780 -534 729 201 29 117 chr20 47945280 47945588 -24208294 + MER33 DNA MER1_type 1 274 -50 4081 92 12 5 chr20 47945639 47946229 -24207653 - L1MA2 LINE L1 0 6304 5711 1869 145 0 0 chr20 47946794 47947098 -24206784 + AluSx SINE Alu 1 304 0 633 316 94 19 chr20 47947582 47947889 -24205993 + L2 LINE L2 2943 3272 0 416 234 153 7 chr20 47948621 47948758 -24205124 - MIR SINE MIR -34 228 72 255 204 0 56 chr20 47948752 47948806 -24205076 + MIR SINE MIR 96 146 -62 * 250 220 20 0 chr20 47948811 47948861 -24205021 + L2 LINE L2 3210 3260 -12 478 285 15 0 chr20 47949301 47949438 -24204444 + MER117 DNA MER1_type 31 169 -28 361 345 148 18 chr20 47949693 47949977 -24203905 + L2 LINE L2 2952 3272 0 522 322 90 12 chr20 47950091 47950559 -24203323 - L2 LINE L2 -60 3253 2734 230 290 32 0 chr20 47950570 47950632 -24203250 - L2 LINE L2 0 3272 3209 790 203 20 6 chr20 47950816 47950997 -24202885 - MER63A DNA MER1_type 0 210 26 485 269 220 16 chr20 47951152 47951338 -24202544 + MIR SINE MIR 39 262 0 214 286 0 14 chr20 47951530 47951600 -24202282 + MIR SINE MIR 181 249 -13 4384 239 56 47 chr20 47951701 47954140 -24199742 - L1ME1 LINE L1 -7 6439 4022 1780 203 8 14 chr20 47954140 47954505 -24199377 + MLT1A1 LTR MaLR 3 365 0 4384 239 56 47 chr20 47954505 47954704 -24199178 - L1ME1 LINE L1 -2424 4022 3826 231 36 0 0 chr20 47954704 47954732 -24199150 + (TTTG)n Simple_repeat Simple_repeat 4 31 0 1477 181 38 0 chr20 47954732 47954998 -24198884 - AluJo SINE Alu -32 280 5 4384 239 56 47 chr20 47954998 47955797 -24198085 - L1ME1 LINE L1 -2619 3827 1486 270 241 0 0 chr20 47955811 47955865 -24198017 + L1MEc LINE L1 499 552 -5844 1365 246 66 54 chr20 47955870 47956060 -24197822 - L1ME1 LINE L1 -5825 782 596 261 0 0 0 chr20 47956060 47956089 -24197793 + (CA)n Simple_repeat Simple_repeat 1 29 0 1365 246 66 54 chr20 47956089 47956397 -24197485 - L1ME1 LINE L1 -6011 596 278 532 321 22 5 chr20 47956949 47957133 -24196749 - MER117 DNA MER1_type 0 197 11 23 33 0 0 chr20 47957290 47957320 -24196562 + AT_rich Low_complexity Low_complexity 1 30 0 547 236 27 0 chr20 47957515 47957625 -24196257 + MER81 DNA DNA 2 114 0 221 287 39 146 chr20 47958034 47958204 -24195678 - L2 LINE L2 -12 3260 3142 749 259 43 28 chr20 47958204 47958459 -24195423 - MIR SINE MIR -1 261 3 221 287 39 146 chr20 47958459 47958623 -24195259 - L2 LINE L2 -130 3142 2962 359 286 224 39 chr20 47958698 47959215 -24194667 - L2 LINE L2 -455 2859 2247 490 282 48 48 chr20 47959519 47959728 -24194154 - MIR SINE MIR -6 256 48 2193 105 0 0 chr20 47959987 47960291 -24193591 + AluSc SINE Alu 1 304 -5 2055 117 0 10 chr20 47960626 47960924 -24192958 - AluSc SINE Alu -14 295 1 196 157 98 59 chr20 47961271 47961322 -24192560 - L2 LINE L2 -7 3265 3213 29 84 0 0 chr20 47961350 47961421 -24192461 + AT_rich Low_complexity Low_complexity 1 71 0 272 190 155 0 chr20 47961432 47961490 -24192392 + MIR SINE MIR 86 152 -110 189 327 149 9 chr20 47961722 47961829 -24192053 - MIR SINE MIR -129 133 12 581 279 45 6 chr20 47961965 47962144 -24191738 + MIR SINE MIR 33 218 -44 348 214 60 12 chr20 47962141 47962225 -24191657 - L2 LINE L2 -17 3255 3168 * 1763 166 29 37 chr20 47962349 47962699 -24191183 - MLT1B LTR MaLR -42 348 2 260 365 10 19 chr20 47963059 47963163 -24190719 - MIR SINE MIR -147 115 13 411 281 61 65 chr20 47963469 47963700 -24190182 + L2 LINE L2 2618 2847 -467 709 283 170 0 chr20 47963862 47964138 -24189744 - MLT1J2 LTR MaLR -125 325 3 2133 148 11 48 chr20 47964412 47964791 -24189091 - MLT1A1 LTR MaLR 0 365 1 198 381 39 32 chr20 47965976 47966131 -24187751 - L2 LINE L2 -1 3271 3116 238 135 0 0 chr20 47966141 47966178 -24187704 - L2 LINE L2 -16 3297 3261 1128 262 86 38 chr20 47966414 47966811 -24187071 + LTR16C LTR ERVL 73 488 -3 1944 127 7 13 chr20 47967000 47967308 -24186574 + AluSx SINE Alu 1 306 -6 587 271 45 8 chr20 47969264 47969397 -24184485 + MER91C DNA MER1_type 1 138 -2 205 343 11 0 chr20 47970516 47970601 -24183281 - MIR SINE MIR -67 141 83 622 196 46 88 chr20 47970713 47970907 -24182975 + LTR33A LTR ERVL 335 520 -3 188 241 12 72 chr20 47970955 47971038 -24182844 + L2 LINE L2 3119 3196 -117 506 235 0 0 chr20 47971077 47971175 -24182707 + FLAM_A SINE Alu 24 121 -21 398 298 10 10 chr20 47971178 47971282 -24182600 + L2 LINE L2 3210 3313 0 1771 202 19 25 chr20 47971651 47972018 -24181864 + MLT1A1 LTR MaLR 1 365 0 198 258 0 0 chr20 47972021 47972083 -24181799 + (CA)n Simple_repeat Simple_repeat 2 63 0 362 322 6 47 chr20 47972085 47972256 -24181626 + (CATG)n Simple_repeat Simple_repeat 4 167 0 426 256 28 28 chr20 47972485 47972665 -24181217 + (TG)n Simple_repeat Simple_repeat 1 180 0 312 319 91 24 chr20 47973818 47974028 -24179854 - L2 LINE L2 -135 3137 2914 244 283 152 0 chr20 47974410 47974509 -24179373 - MIR SINE MIR -62 146 33 411 236 11 6 chr20 47974813 47974991 -24178891 + CT-rich Low_complexity Low_complexity 2 180 0 590 246 37 32 chr20 47975491 47975678 -24178204 + MIR SINE MIR 44 231 -31 689 166 92 18 chr20 47976013 47976176 -24177706 + MER53 DNA DNA 15 189 0 182 286 29 71 chr20 47977081 47977151 -24176731 + L2 LINE L2 3190 3256 -16 * 289 329 13 0 chr20 47977125 47977204 -24176678 - MIR SINE MIR -12 250 171 586 259 27 40 chr20 47977443 47977667 -24176215 + LTR33 LTR ERVL 298 518 -3 388 229 39 16 chr20 47977669 47977808 -24176074 - MIR SINE MIR -61 147 35 1311 175 19 0 chr20 47978121 47978332 -24175550 + MER20 DNA MER1_type 1 215 -4 218 250 135 55 chr20 47978337 47978486 -24175396 - MIR3 SINE MIR -11 197 27 323 245 133 0 chr20 47979359 47979457 -24174425 - LTR33 LTR ERVL -55 466 356 1799 124 34 7 chr20 47979457 47979755 -24174127 - THE1B LTR MaLR 0 355 1 691 237 119 5 chr20 47979790 47980007 -24173875 - LTR33 LTR ERVL -259 264 47 315 294 48 16 chr20 47980898 47981024 -24172858 + MER117 DNA MER1_type 68 197 0 235 342 124 26 chr20 47981546 47981853 -24172029 + L2 LINE L2 2823 3159 -113 240 320 50 20 chr20 47983099 47983199 -24170683 + MIR SINE MIR 87 189 -73 191 339 0 0 chr20 47983333 47983398 -24170484 - MIR SINE MIR -162 100 36 262 359 96 15 chr20 47983914 47984112 -24169770 + L2 LINE L2 2849 3062 -210 280 295 53 11 chr20 47984182 47984277 -24169605 + L2 LINE L2 3169 3267 -5 301 244 12 12 chr20 47984458 47984544 -24169338 + L1M4 LINE L1 2968 3053 -3093 549 170 45 9 chr20 47984591 47984703 -24169179 - HAL1 LINE L1 -2344 163 48 1243 267 20 8 chr20 47984732 47985125 -24168757 + LTR16B LTR ERVL 9 433 -31 512 308 8 0 chr20 47985387 47985520 -24168362 + MIR3 SINE MIR 37 170 -38 241 224 17 17 chr20 47986013 47986071 -24167811 + MIR SINE MIR 107 164 -98 321 301 89 0 chr20 47986288 47986411 -24167471 - MIR SINE MIR -51 211 78 21 0 0 0 chr20 47987106 47987127 -24166755 + AT_rich Low_complexity Low_complexity 1 21 0 1972 82 55 7 chr20 47987905 47988196 -24165686 - AluSc SINE Alu -2 307 3 1201 151 49 0 chr20 47988273 47988478 -24165404 - MER20 DNA MER1_type -4 215 1 487 244 82 0 chr20 47988697 47988832 -24165050 + MIR SINE MIR 111 256 -6 674 220 138 32 chr20 47989056 47989274 -24164608 - MIR SINE MIR -5 257 17 1659 185 7 7 chr20 47989281 47989578 -24164304 - AluJb SINE Alu -15 297 1 2539 102 24 16 chr20 47989647 47990019 -24163863 + THE1C LTR MaLR 1 375 0 522 278 12 35 chr20 47991288 47991457 -24162425 + MIR SINE MIR 98 262 0 761 175 119 26 chr20 47991950 47992144 -24161738 + L2 LINE L2 3102 3313 0 1185 234 34 125 chr20 47992307 47992859 -24161023 + L2 LINE L2 2804 3305 -8 509 303 67 58 chr20 47992869 47993245 -24160637 + HAL1b LINE L1 343 721 -627 22 56 0 0 chr20 47993322 47993358 -24160524 + AT_rich Low_complexity Low_complexity 1 36 0 192 143 0 0 chr20 47993778 47993820 -24160062 + (T)n Simple_repeat Simple_repeat 1 42 0 195 162 0 0 chr20 47993900 47993937 -24159945 + (CAAG)n Simple_repeat Simple_repeat 2 38 0 1994 68 4 11 chr20 47994021 47994286 -24159596 - AluY SINE Alu -16 295 33 1648 193 6 3 chr20 47994300 47994611 -24159271 + AluJb SINE Alu 1 312 0 1338 32 6 0 chr20 47994670 47994828 -24159054 - L1PA4 LINE L1 -126 6029 5871 995 56 0 0 chr20 47994828 47994950 -24158932 + L1PA4 LINE L1 6025 6150 -5 260 254 36 9 chr20 47995395 47995505 -24158377 - Charlie7 DNA MER1_type -6 2606 2494 285 258 43 11 chr20 47995678 47995771 -24158111 - Charlie7 DNA MER1_type -2511 101 6 601 315 83 87 chr20 47995790 47996278 -24157604 + L1M4 LINE L1 2686 3174 -2972 1991 107 3 30 chr20 47996278 47996578 -24157304 + AluSx SINE Alu 1 292 -20 601 315 83 87 chr20 47996578 47997050 -24156832 + L1M4 LINE L1 3174 3845 -2301 313 351 79 26 chr20 47997496 47997724 -24156158 + L1M4 LINE L1 3839 4078 -2068 520 217 85 0 chr20 47997724 47997830 -24156052 - MER20 DNA MER1_type -98 121 7 623 305 84 17 chr20 47997851 47998195 -24155687 + L1M4 LINE L1 4116 4482 -1664 256 299 92 0 chr20 47998217 47998304 -24155578 + L2 LINE L2 2688 2782 -532 507 319 61 28 chr20 47998384 47998597 -24155285 - L3 LINE CR1 -316 1261 1042 311 279 169 15 chr20 47998650 47998786 -24155096 + MIR SINE MIR 47 203 -59 259 348 201 4 chr20 47998834 47999093 -24154789 + L2 LINE L2 2553 2862 -452 786 128 0 0 chr20 47999834 47999959 -24153923 - L1MB1 LINE L1 -1 6167 6043 764 191 28 51 chr20 48000164 48000342 -24153540 + MER5B DNA MER1_type 2 175 -3 553 233 8 16 chr20 48000484 48000613 -24153269 + MLT1A2 LTR MaLR 197 324 -50 234 108 27 0 chr20 48000667 48000704 -24153178 + MLT1A2 LTR MaLR 418 455 -2 587 243 56 19 chr20 48000801 48000985 -24152897 - MIR SINE MIR -65 143 2 235 217 0 0 chr20 48001307 48001353 -24152529 - L2 LINE L2 -6 3307 3262 252 318 106 12 chr20 48001402 48001487 -24152395 + MIR SINE MIR 16 108 -154 22 35 0 0 chr20 48001510 48001539 -24152343 + AT_rich Low_complexity Low_complexity 1 29 0 264 111 0 0 chr20 48001904 48001949 -24151933 + (CAGA)n Simple_repeat Simple_repeat 2 46 0 211 234 75 47 chr20 48001974 48002081 -24151801 + MIR SINE MIR 15 124 -138 420 232 81 10 chr20 48002350 48002449 -24151433 + MIR SINE MIR 30 135 -73 661 228 56 41 chr20 48002557 48002754 -24151128 + L2 LINE L2 3114 3313 0 181 222 0 0 chr20 48003006 48003042 -24150840 - L2 LINE L2 -2918 396 361 188 200 44 22 chr20 48003111 48003156 -24150726 + MIR SINE MIR 147 192 -70 3043 205 123 11 chr20 48003162 48003248 -24150634 + L1MC4 LINE L1 6986 7061 -981 180 77 0 0 chr20 48003248 48003274 -24150608 + (TAAA)n Simple_repeat Simple_repeat 4 29 0 3043 205 123 11 chr20 48003274 48003973 -24149909 + L1MC4 LINE L1 7061 7859 -183 264 331 51 39 chr20 48004527 48004705 -24149177 - MIR SINE MIR -6 256 77 196 289 0 0 chr20 48005003 48005055 -24148827 - L2 LINE L2 0 3313 3262 983 129 71 6 chr20 48005085 48005255 -24148627 + MER5A DNA MER1_type 8 188 -1 293 325 110 6 chr20 48005679 48005842 -24148040 - MER5A DNA MER1_type -3 186 7 479 231 79 94 chr20 48006505 48006708 -24147174 + MIR SINE MIR 14 213 -49 324 218 172 0 chr20 48006679 48006766 -24147116 - MIR SINE MIR 0 262 161 * 257 313 0 0 chr20 48006792 48006856 -24147026 + MIR SINE MIR 193 256 -6 387 0 0 0 chr20 48008369 48008412 -24145470 + (CA)n Simple_repeat Simple_repeat 2 44 0 298 272 49 0 chr20 48009485 48009566 -24144316 - MIR SINE MIR -105 157 73 328 336 46 8 chr20 48009581 48009712 -24144170 - MIR SINE MIR -94 168 33 215 358 0 0 chr20 48010120 48010201 -24143681 + L2 LINE L2 3021 3101 -171 192 179 0 0 chr20 48010421 48010460 -24143422 + (CA)n Simple_repeat Simple_repeat 1 39 0 659 312 82 13 chr20 48011039 48011270 -24142612 + MIR SINE MIR 9 255 -7 308 257 243 20 chr20 48011634 48011786 -24142096 - MIR SINE MIR -43 219 34 282 267 103 68 chr20 48012107 48012253 -24141629 + MIR3 SINE MIR 33 183 -25 317 281 83 57 chr20 48015901 48016081 -24137801 + L1ME4a LINE L1 5179 5361 -785 622 251 56 40 chr20 48016081 48016332 -24137550 - MIR SINE MIR -3 259 5 317 281 83 57 chr20 48016332 48016363 -24137519 + L1ME4a LINE L1 5361 5390 -756 1943 154 0 0 chr20 48016477 48016776 -24137106 + AluSx SINE Alu 1 299 -13 670 240 136 27 chr20 48016807 48017252 -24136630 + L1ME4a LINE L1 5573 6103 -18 298 214 237 23 chr20 48017434 48017565 -24136317 + MIR SINE MIR 103 261 -1 395 299 119 21 chr20 48017824 48018018 -24135864 - MIR SINE MIR -19 243 31 360 225 225 18 chr20 48018037 48018148 -24135734 + MIR SINE MIR 11 144 -118 1437 207 83 18 chr20 48018159 48018545 -24135337 - HsTC2 DNA Tc2 -29 1869 1283 463 181 147 35 chr20 48018558 48018674 -24135208 - HsTC2 DNA Tc2 -1769 129 1 343 220 11 22 chr20 48018674 48018765 -24135117 + MIR SINE MIR 156 245 -17 189 0 0 0 chr20 48018765 48018786 -24135096 + (CAT)n Simple_repeat Simple_repeat 2 22 0 312 298 0 53 chr20 48018964 48019095 -24134787 + CT-rich Low_complexity Low_complexity 2 125 0 294 305 139 22 chr20 48019818 48020044 -24133838 - MIR SINE MIR -7 255 8 513 280 59 63 chr20 48021032 48021303 -24132579 - L1ME4a LINE L1 0 6121 5852 290 198 161 12 chr20 48021372 48021453 -24132429 - L2 LINE L2 -1 3271 3179 297 239 184 28 chr20 48021845 48021954 -24131928 + MIR SINE MIR 20 145 -117 488 335 74 47 chr20 48022627 48023030 -24130852 + L2 LINE L2 2899 3312 -1 231 246 18 0 chr20 48023033 48023090 -24130792 + (TGAA)n Simple_repeat Simple_repeat 4 61 0 1119 228 69 65 chr20 48023360 48023882 -24130000 - L1MC5 LINE L1 -170 7791 7268 252 263 0 0 chr20 48024122 48024179 -24129703 + MIR SINE MIR 104 160 -102 1097 208 14 5 chr20 48024233 48024440 -24129442 - MIR SINE MIR -48 214 6 418 242 13 105 chr20 48024682 48024835 -24129047 - MIR3 SINE MIR -26 182 44 215 225 0 0 chr20 48025148 48025188 -24128694 - MIR SINE MIR -137 71 32 188 243 287 45 chr20 48026143 48026345 -24127537 - L2 LINE L2 -339 2975 2725 548 250 95 47 chr20 48027363 48027595 -24126287 + MIR SINE MIR 10 252 -10 1117 219 0 4 chr20 48027642 48027880 -24126002 + LTR16B LTR ERVL 228 464 0 234 0 0 0 chr20 48028184 48028210 -24125672 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 184 250 0 0 chr20 48029015 48029055 -24124827 - L2 LINE L2 -9 3304 3265 928 276 101 15 chr20 48029539 48029934 -24123948 + L1MC4a LINE L1 5465 5893 -1915 344 305 107 15 chr20 48030596 48030727 -24123155 - MER5A DNA MER1_type -2 187 45 421 284 143 46 chr20 48031021 48031391 -24122491 - L2 LINE L2 -347 2967 2562 507 240 172 16 chr20 48032084 48032276 -24121606 + MIR SINE MIR 10 231 -31 265 193 53 0 chr20 48032311 48032368 -24121514 + MIR SINE MIR 132 191 -71 2009 97 0 26 chr20 48032381 48032679 -24121203 + AluSx SINE Alu 42 332 0 24 32 0 0 chr20 48037158 48037189 -24116693 + GC_rich Low_complexity Low_complexity 1 31 0 215 185 0 37 chr20 48037260 48037314 -24116568 + (CGAG)n Simple_repeat Simple_repeat 4 55 0 210 128 0 0 chr20 48038017 48038056 -24115826 + (CCA)n Simple_repeat Simple_repeat 3 41 0 21 82 0 0 chr20 48038187 48038236 -24115646 + GC_rich Low_complexity Low_complexity 1 49 0 235 258 21 31 chr20 48038606 48038703 -24115179 + (CCCCAG)n Simple_repeat Simple_repeat 3 98 0 245 197 33 0 chr20 48038719 48038780 -24115102 + (CGGG)n Simple_repeat Simple_repeat 2 64 0 264 350 107 7 chr20 48045721 48045861 -24108021 - MIR SINE MIR -89 173 20 303 85 0 0 chr20 48046171 48046218 -24107664 + (TG)n Simple_repeat Simple_repeat 1 47 0 191 188 21 0 chr20 48046611 48046659 -24107223 + (CATA)n Simple_repeat Simple_repeat 4 52 0 297 278 143 40 chr20 48047540 48047666 -24106216 - L2 LINE L2 0 3272 3134 207 100 0 0 chr20 48047701 48047731 -24106151 + (TTCTCC)n Simple_repeat Simple_repeat 4 33 0 839 199 34 0 chr20 48047735 48047881 -24106001 - AluJo SINE Alu -36 276 126 293 293 53 0 chr20 48047973 48048048 -24105834 - L2 LINE L2 -218 3054 2976 880 179 6 6 chr20 48048067 48048229 -24105653 + MER3 DNA MER1_type 1 162 -47 1106 266 6 98 chr20 48048254 48048784 -24105098 + L2 LINE L2 2827 3307 -6 230 153 34 17 chr20 48048864 48048923 -24104959 + (CAAT)n Simple_repeat Simple_repeat 3 62 0 419 118 39 45 chr20 48048924 48049102 -24104780 + (TCTA)n Simple_repeat Simple_repeat 2 178 0 201 254 0 32 chr20 48049257 48049320 -24104562 + G-rich Low_complexity Low_complexity 6 66 0 236 313 78 9 chr20 48051221 48051336 -24102546 + L3 LINE CR1 264 386 -1191 924 287 20 4 chr20 48051367 48051611 -24102271 - MIR SINE MIR -13 249 2 2032 151 0 7 chr20 48051790 48052082 -24101800 + AluSx SINE Alu 1 290 -22 232 284 21 32 chr20 48052484 48052579 -24101303 + MIR SINE MIR 53 146 -62 717 313 20 4 chr20 48053334 48053580 -24100302 + MIR SINE MIR 13 262 0 565 259 207 5 chr20 48053597 48053790 -24100092 + MIR SINE MIR 1 232 -30 204 40 0 0 chr20 48053843 48053868 -24100014 + (TTC)n Simple_repeat Simple_repeat 1 25 0 445 305 60 43 chr20 48054353 48054586 -24099296 + MIR SINE MIR 7 243 -19 265 297 139 0 chr20 48056218 48056319 -24097563 + MIR SINE MIR 33 147 -61 717 259 6 6 chr20 48057179 48057353 -24096529 - MER45A DNA AcHobo -4 174 1 247 259 0 0 chr20 48057804 48057858 -24096024 - L2 LINE L2 -18 3295 3242 325 257 40 6 chr20 48058483 48058846 -24095036 + (CA)n Simple_repeat Simple_repeat 1 375 0 368 175 33 48 chr20 48058863 48059111 -24094771 + (CA)n Simple_repeat Simple_repeat 1 244 0 2930 10 0 0 chr20 48059130 48059439 -24094443 - AluYa5 SINE Alu -2 309 1 270 211 26 26 chr20 48060255 48060331 -24093551 - MIR SINE MIR -68 140 65 1833 194 26 35 chr20 48060555 48060984 -24092898 + MLT1D LTR MaLR 8 432 -73 229 278 0 0 chr20 48061133 48061205 -24092677 + (TAA)n Simple_repeat Simple_repeat 2 73 0 769 193 0 83 chr20 48061242 48061434 -24092448 - MIR SINE MIR -48 214 39 243 0 0 0 chr20 48062065 48062092 -24091790 + (CAGGC)n Simple_repeat Simple_repeat 1 27 0 280 254 0 45 chr20 48062168 48062278 -24091604 + G-rich Low_complexity Low_complexity 6 110 0 364 349 74 19 chr20 48062851 48063066 -24090816 - MIR SINE MIR -10 252 26 202 232 0 0 chr20 48063093 48063149 -24090733 - L2 LINE L2 -299 2973 2918 410 258 147 53 chr20 48063365 48063555 -24090327 + MIR SINE MIR 34 241 -21 1968 132 3 24 chr20 48064076 48064372 -24089510 + AluSx SINE Alu 1 290 -22 872 178 153 25 chr20 48064557 48064798 -24089084 - ORSL DNA AcHobo 0 275 4 531 261 8 8 chr20 48064846 48064976 -24088906 + MIR SINE MIR 20 149 -113 202 28 28 28 chr20 48065759 48065795 -24088087 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 2078 128 3 14 chr20 48065798 48066095 -24087787 - AluSq SINE Alu -18 295 2 383 311 42 0 chr20 48066571 48066690 -24087192 + L2 LINE L2 3187 3310 -3 347 255 85 19 chr20 48066926 48067032 -24086850 - L2 LINE L2 0 3272 3160 371 299 122 0 chr20 48067034 48067181 -24086701 + MIR SINE MIR 89 253 -9 201 159 0 0 chr20 48067335 48067379 -24086503 + (CA)n Simple_repeat Simple_repeat 1 44 0 192 77 0 0 chr20 48067378 48067404 -24086478 + (GA)n Simple_repeat Simple_repeat 2 27 0 * 210 261 143 34 chr20 48067861 48067980 -24085902 + MIR3 SINE MIR 7 138 -70 23 33 0 0 chr20 48068395 48068425 -24085457 + AT_rich Low_complexity Low_complexity 1 30 0 257 184 23 103 chr20 48068536 48068623 -24085259 - MER116 DNA Mariner 0 80 1 599 313 95 40 chr20 48068871 48069293 -24084589 + L2 LINE L2 2827 3271 -1 1806 230 82 29 chr20 48069485 48070045 -24083837 - MLT1G LTR MaLR 0 590 1 2104 127 3 3 chr20 48070166 48070473 -24083409 + AluSq SINE Alu 7 313 0 462 312 99 0 chr20 48070523 48070664 -24083218 + MIR SINE MIR 46 200 -62 294 328 48 32 chr20 48070932 48071121 -24082761 + L3 LINE CR1 529 720 -857 522 307 15 0 chr20 48071200 48071337 -24082545 - MIR SINE MIR -40 222 84 385 255 57 0 chr20 48071340 48071446 -24082436 + L3 LINE CR1 951 1062 -515 337 311 91 8 chr20 48071670 48071802 -24082080 + L3 LINE CR1 1386 1528 -49 525 302 41 0 chr20 48071963 48072135 -24081747 - MIR SINE MIR -48 214 36 244 354 0 0 chr20 48072374 48072453 -24081429 - L2 LINE L2 -63 3250 3172 1240 287 93 0 chr20 48072491 48072930 -24080952 + LTR16C LTR ERVL 4 483 -8 357 231 170 34 chr20 48074063 48074203 -24079679 + MIR SINE MIR 26 188 -74 2326 93 3 0 chr20 48074203 48074493 -24079389 - AluSq SINE Alu -22 291 1 603 239 75 68 chr20 48075022 48075302 -24078580 - L1ME LINE L1 -382 5739 5458 471 348 59 4 chr20 48076701 48076937 -24076945 - MIR SINE MIR -12 250 2 236 311 123 16 chr20 48076961 48077083 -24076799 + L2 LINE L2 3138 3272 0 328 317 10 10 chr20 48077124 48077225 -24076657 - MIR SINE MIR -157 105 5 190 256 0 0 chr20 48077255 48077294 -24076588 + MIR SINE MIR 218 256 -6 210 191 0 0 chr20 48079452 48079499 -24074383 + (TG)n Simple_repeat Simple_repeat 1 47 0 281 118 20 0 chr20 48080555 48080606 -24073276 + CT-rich Low_complexity Low_complexity 1 52 0 718 248 52 22 chr20 48080666 48080896 -24072986 + MIR SINE MIR 16 252 -10 695 263 58 5 chr20 48081106 48081296 -24072586 + MIR SINE MIR 12 211 -51 232 196 0 0 chr20 48081645 48081691 -24072191 - L2 LINE L2 0 3272 3227 181 352 14 0 chr20 48081747 48081818 -24072064 + L2 LINE L2 2993 3064 -208 240 272 78 10 chr20 48082645 48082748 -24071134 + (CATG)n Simple_repeat Simple_repeat 2 111 0 1139 196 27 5 chr20 48083619 48083838 -24070044 + MER58A DNA MER1_type 1 224 0 230 250 0 0 chr20 48083875 48083923 -24069959 + L2 LINE L2 3266 3313 0 392 181 0 11 chr20 48084035 48084129 -24069753 + (CA)n Simple_repeat Simple_repeat 2 94 0 282 287 31 0 chr20 48084189 48084318 -24069564 - L2 LINE L2 -256 3057 2925 239 333 72 0 chr20 48084553 48084691 -24069191 + MIR SINE MIR 87 234 -28 845 164 14 111 chr20 48084703 48084911 -24068971 - MER53 DNA DNA 0 189 2 180 245 0 0 chr20 48085068 48085121 -24068761 - MIR SINE MIR -78 130 78 288 281 74 0 chr20 48085289 48085410 -24068472 + MIR SINE MIR 83 212 -50 293 270 190 29 chr20 48085918 48086092 -24067790 - MIR SINE MIR -27 235 34 271 307 40 17 chr20 48087011 48087187 -24066695 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 225 139 0 0 chr20 48088073 48088116 -24065766 + (TC)n Simple_repeat Simple_repeat 1 43 0 292 300 0 25 chr20 48088143 48088263 -24065619 + CT-rich Low_complexity Low_complexity 2 118 0 2222 117 0 0 chr20 48088497 48088788 -24065094 - AluSx SINE Alu -21 291 1 578 285 48 16 chr20 48089097 48089283 -24064599 + MIR SINE MIR 1 192 -70 1036 315 52 26 chr20 48089304 48089729 -24064153 - MLT2F LTR ERVL -1 662 227 417 306 81 29 chr20 48090193 48090366 -24063516 + MLT1J1 LTR MaLR 119 300 -146 989 171 11 6 chr20 48090373 48090554 -24063328 + MER5A DNA MER1_type 1 182 -7 275 250 15 0 chr20 48090876 48090944 -24062938 - MIR SINE MIR -85 177 109 912 198 21 11 chr20 48091430 48091617 -24062265 - MER5A DNA MER1_type 0 189 1 202 98 49 24 chr20 48091843 48091884 -24061998 + A-rich Low_complexity Low_complexity 2 43 0 316 268 165 46 chr20 48093179 48093373 -24060509 - MIR SINE MIR -6 256 40 1026 271 162 22 chr20 48093497 48093955 -24059927 - LTR33A LTR ERVL 0 523 2 2370 104 0 0 chr20 48094334 48094633 -24059249 - AluSx SINE Alu -13 299 1 279 309 0 0 chr20 48094760 48094854 -24059028 - MIR SINE MIR -108 154 61 468 201 66 138 chr20 48095565 48095791 -24058091 + MLT1K LTR MaLR 307 507 -81 1983 138 3 0 chr20 48095791 48096080 -24057802 - AluSx SINE Alu -22 290 1 468 201 66 138 chr20 48096080 48096157 -24057725 + MLT1K LTR MaLR 507 588 0 547 326 16 0 chr20 48096458 48096648 -24057234 - MIR SINE MIR -62 200 8 1689 260 64 25 chr20 48097090 48097574 -24056308 + MER69 DNA AcHobo 66 568 -1958 1062 192 132 42 chr20 48097581 48097967 -24055915 + MER69 DNA AcHobo 2019 2439 -87 934 230 49 52 chr20 48097976 48098263 -24055619 - L1ME1 LINE L1 -3 6163 5878 236 167 0 83 chr20 48098448 48098508 -24055374 + L2 LINE L2 2923 2977 -295 1520 225 53 46 chr20 48099055 48099486 -24054396 + MLT1C LTR MaLR 34 467 0 26 50 0 0 chr20 48099652 48099692 -24054190 + AT_rich Low_complexity Low_complexity 1 40 0 367 289 150 28 chr20 48099697 48099984 -24053898 + L1ME4a LINE L1 5403 5724 -397 2017 130 74 42 chr20 48099985 48100338 -24053544 + THE1B LTR MaLR 1 364 0 665 202 118 59 chr20 48100338 48100576 -24053306 + MLT1C LTR MaLR 109 360 -107 260 289 25 50 chr20 48100633 48100792 -24053090 + L1ME4a LINE L1 5720 5874 -247 218 356 10 10 chr20 48100830 48100934 -24052948 - MIR SINE MIR -112 150 47 850 157 6 36 chr20 48100946 48101112 -24052770 + MLT1B LTR MaLR 1 161 -229 43855 30 23 3 chr20 48101121 48107155 -24046727 - L1PA3 LINE L1 0 6155 2 1375 136 51 21 chr20 48107155 48107391 -24046491 + MLT1B LTR MaLR 148 390 0 1431 166 33 48 chr20 48107435 48107770 -24046112 - MER33 DNA MER1_type -1 323 1 5327 144 28 46 chr20 48108019 48109046 -24044836 - Ricksha_b DNA DNA -7 1247 239 607 170 18 0 chr20 48109058 48109170 -24044712 - Ricksha_b DNA DNA -1135 119 6 4682 226 79 47 chr20 48110304 48112892 -24040990 + L1ME2 LINE L1 3496 6154 -10 251 164 36 0 chr20 48112964 48113019 -24040863 + (CATATA)n Simple_repeat Simple_repeat 2 58 0 271 266 0 0 chr20 48113647 48113711 -24040171 + Tigger6 DNA MER2_type 1 64 -1019 25 0 0 0 chr20 48113739 48113764 -24040118 + AT_rich Low_complexity Low_complexity 1 25 0 2096 113 0 7 chr20 48114192 48114476 -24039406 - AluSx SINE Alu -30 282 1 266 237 52 31 chr20 48114714 48114811 -24039071 + L1ME4a LINE L1 5979 6077 -44 4062 167 25 57 chr20 48114933 48115945 -24037937 - L1MB8 LINE L1 -9 6169 5191 374 77 0 0 chr20 48115967 48116019 -24037863 - L1PA6 LINE L1 -2 6152 6101 3003 82 0 5 chr20 48116019 48116411 -24037471 - L1PA8A LINE L1 -2 6129 5740 3609 186 22 25 chr20 48116413 48116724 -24037158 - L1MB8 LINE L1 -1436 4710 4400 5248 27 2 28 chr20 48116724 48117357 -24036525 - L1PA3 LINE L1 -3 6152 5537 3609 186 22 25 chr20 48117357 48117890 -24035992 - L1MB8 LINE L1 -1746 4400 3868 1684 203 92 43 chr20 48119306 48119750 -24034132 + MLT1D LTR MaLR 1 466 -39 382 269 25 0 chr20 48120193 48120312 -24033570 + MIR SINE MIR 56 177 -85 267 326 11 11 chr20 48120974 48121069 -24032813 - MIR SINE MIR -74 134 40 201 39 0 0 chr20 48121113 48121139 -24032743 + (CA)n Simple_repeat Simple_repeat 2 27 0 883 204 21 34 chr20 48121175 48121410 -24032472 + MIR SINE MIR 28 259 -3 224 281 35 0 chr20 48121391 48121448 -24032434 - L2 LINE L2 -10 3303 3245 * 225 306 16 0 chr20 48122174 48122236 -24031646 + (CACCAT)n Simple_repeat Simple_repeat 6 68 0 282 184 184 23 chr20 48122238 48122325 -24031557 + MIR SINE MIR 28 128 -134 270 310 90 0 chr20 48122422 48122567 -24031315 + MIR SINE MIR 94 251 -11 312 352 111 10 chr20 48122748 48123143 -24030739 + L2 LINE L2 2059 2493 -821 917 77 16 44 chr20 48123157 48123340 -24030542 + (TTCCC)n Simple_repeat Simple_repeat 3 180 0 237 175 0 111 chr20 48123367 48123430 -24030452 - L2 LINE L2 -10 3262 3207 308 337 77 0 chr20 48123479 48123648 -24030234 - LTR67 LTR ERVL 0 557 376 1393 185 59 11 chr20 48124034 48124321 -24029561 + AluJo SINE Alu 2 302 0 2237 73 30 27 chr20 48124496 48124796 -24029086 - AluY SINE Alu -10 301 1 572 251 29 29 chr20 48126216 48126423 -24027459 + MIR SINE MIR 41 247 -15 259 266 12 92 chr20 48126450 48126474 -24027408 - L1MA10 LINE L1 0 6334 6311 3539 232 43 46 chr20 48126474 48127858 -24026024 - L1ME1 LINE L1 -8 6158 4798 792 181 0 15 chr20 48127858 48127991 -24025891 - FLAM_A SINE Alu -2 131 1 3539 232 43 46 chr20 48127991 48128555 -24025327 - L1ME1 LINE L1 -1368 4798 4234 331 218 11 35 chr20 48128558 48128645 -24025237 + MIR SINE MIR 123 207 -55 2540 150 18 27 chr20 48128702 48129150 -24024732 - L1PA16 LINE L1 -2 6164 5721 839 213 93 5 chr20 48129167 48129383 -24024499 + L1ME3A LINE L1 5935 6169 -1 246 303 50 0 chr20 48129454 48129553 -24024329 - MIR SINE MIR -89 173 70 466 288 73 29 chr20 48130111 48130316 -24023566 + MIR SINE MIR 35 248 -14 463 292 90 87 chr20 48130996 48131386 -24022496 + L2 LINE L2 2882 3272 0 182 313 50 12 chr20 48132290 48132370 -24021512 - L2 LINE L2 -40 3232 3150 237 242 32 16 chr20 48133195 48133257 -24020625 + MIR SINE MIR 87 149 -59 305 350 65 50 chr20 48133779 48134274 -24019608 + L2 LINE L2 2245 2746 -568 184 311 27 40 chr20 48135680 48135754 -24018128 - MIR SINE MIR -170 92 20 317 363 88 43 chr20 48136164 48136492 -24017390 + L3 LINE CR1 36 378 -1199 494 261 31 12 chr20 48137014 48137175 -24016707 + LTR67 LTR ERVL 386 549 -8 276 317 49 0 chr20 48137191 48137314 -24016568 + L3 LINE CR1 398 526 -1051 1933 179 69 43 chr20 48137384 48137876 -24016006 + MLT1D LTR MaLR 1 505 0 21 0 0 0 chr20 48137915 48137936 -24015946 + AT_rich Low_complexity Low_complexity 1 21 0 741 247 64 30 chr20 48138182 48138417 -24015465 - MIR SINE MIR 0 262 20 227 289 231 0 chr20 48139823 48139944 -24013938 + MIR SINE MIR 113 261 -1 394 342 0 7 chr20 48140287 48140442 -24013440 + MIR3 SINE MIR 37 190 -18 257 263 0 12 chr20 48140518 48140598 -24013284 - MIR SINE MIR -11 251 173 580 254 32 73 chr20 48141024 48141075 -24012807 - MIR SINE MIR 0 262 210 865 244 48 0 chr20 48141075 48141284 -24012598 + MER20 DNA MER1_type 1 219 0 580 254 32 73 chr20 48141284 48141480 -24012402 - MIR SINE MIR -52 210 25 225 0 0 0 chr20 48141734 48141759 -24012123 + (AGCTG)n Simple_repeat Simple_repeat 1 25 0 470 315 19 0 chr20 48142721 48142883 -24010999 + MIR SINE MIR 90 254 -8 214 266 47 0 chr20 48142920 48142984 -24010898 - MIR SINE MIR -91 171 105 214 305 30 89 chr20 48142992 48143228 -24010654 + L2 LINE L2 3016 3237 -35 360 0 0 0 chr20 48143319 48143359 -24010523 + (TG)n Simple_repeat Simple_repeat 2 41 0 475 309 78 60 chr20 48143820 48144153 -24009729 - L2 LINE L2 0 3272 2934 398 313 119 14 chr20 48144274 48144626 -24009256 - L2 LINE L2 -499 2815 2427 224 284 157 30 chr20 48145220 48145354 -24008528 - L2 LINE L2 0 3313 3163 781 295 99 16 chr20 48145386 48145837 -24008045 - L2 LINE L2 -262 3051 2568 1163 227 61 12 chr20 48145977 48146303 -24007579 + MER2 DNA MER2_type 2 343 -1 183 296 273 12 chr20 48146728 48146981 -24006901 - L2 LINE L2 -574 2740 2422 1383 224 58 11 chr20 48147062 48147552 -24006330 + MLT1H LTR MaLR 13 548 -1 519 188 129 0 chr20 48147775 48147876 -24006006 - MER81 DNA DNA 0 114 1 229 295 29 38 chr20 48147962 48148067 -24005815 - MIR SINE MIR -118 144 41 255 61 0 0 chr20 48149416 48149449 -24004433 + (TGAA)n Simple_repeat Simple_repeat 1 33 0 358 247 0 0 chr20 48149560 48149637 -24004245 + L2 LINE L2 2977 3053 -219 2089 114 3 3 chr20 48149676 48149966 -24003916 - AluSg SINE Alu 0 310 21 325 274 41 63 chr20 48150485 48150618 -24003264 + MIR SINE MIR 15 145 -63 805 192 12 41 chr20 48150671 48150843 -24003039 - FRAM SINE Alu -6 170 4 4611 205 54 71 chr20 48150856 48152658 -24001224 - L1MB2 LINE L1 -2 6169 4425 1945 138 21 3 chr20 48152658 48152941 -24000941 - AluSx SINE Alu -18 294 7 4611 205 54 71 chr20 48152941 48153094 -24000788 - L1MB2 LINE L1 -1746 4425 4271 543 309 6 0 chr20 48153105 48153270 -24000612 - MIR SINE MIR -24 238 73 418 365 15 10 chr20 48154900 48155100 -23998782 + MIR SINE MIR 59 259 -3 251 252 42 76 chr20 48155186 48155305 -23998577 + MIR SINE MIR 21 135 -73 252 268 0 37 chr20 48155567 48155649 -23998233 + L2 LINE L2 3234 3312 -1 494 176 12 0 chr20 48155738 48155823 -23998059 + MER45A DNA AcHobo 93 178 0 273 299 23 0 chr20 48155860 48155947 -23997935 + L2 LINE L2 2724 2812 -502 286 288 45 83 chr20 48156024 48156136 -23997746 + L2 LINE L2 2990 3105 -208 2862 108 15 43 chr20 48156136 48156492 -23997390 - L1PA16 LINE L1 -9 6157 5815 2511 78 0 3 chr20 48156492 48156799 -23997083 - AluY SINE Alu -5 306 1 2862 108 15 43 chr20 48156799 48156903 -23996979 - L1PA16 LINE L1 -351 5815 5710 286 288 45 83 chr20 48156903 48157127 -23996755 + L2 LINE L2 3105 3313 0 182 348 14 0 chr20 48157475 48157544 -23996338 - MIR3 SINE MIR -41 167 98 200 173 0 77 chr20 48157683 48157735 -23996147 + MIR SINE MIR 183 230 -32 358 299 194 19 chr20 48157774 48157985 -23995897 - MIR SINE MIR -13 249 2 442 305 0 0 chr20 48158775 48158893 -23994989 - L2 LINE L2 -5 3308 3191 1174 221 30 55 chr20 48158970 48159408 -23994474 - MER63B DNA MER1_type -2 434 8 313 139 83 28 chr20 48160025 48160049 -23993833 - MER46A DNA MER2_type -64 172 145 702 164 0 0 chr20 48160049 48160159 -23993723 + MER46A DNA MER2_type 1 110 -126 453 225 0 0 chr20 48160169 48160258 -23993624 + LTR16C LTR ERVL 403 491 0 453 238 0 0 chr20 48161316 48161459 -23992423 + (TG)n Simple_repeat Simple_repeat 2 144 0 1573 160 21 3 chr20 48161939 48162226 -23991656 + MER33 DNA MER1_type 1 292 -32 1175 162 51 0 chr20 48162285 48162482 -23991400 + MER58A DNA MER1_type 18 224 0 191 271 0 0 chr20 48162519 48162567 -23991315 + L2 LINE L2 3266 3313 0 196 289 0 36 chr20 48162603 48162686 -23991196 - L2 LINE L2 -309 2963 2884 463 287 22 0 chr20 48163186 48163322 -23990560 - MIR SINE MIR -14 248 110 338 279 90 8 chr20 48163792 48163914 -23989968 + L2 LINE L2 3181 3312 -1 2072 98 31 14 chr20 48164683 48164970 -23988912 + AluSp SINE Alu 5 296 -17 1373 166 71 14 chr20 48165401 48165697 -23988185 - MER33 DNA MER1_type -11 313 1 1717 191 0 0 chr20 48166395 48166693 -23987189 + AluJo SINE Alu 1 298 -14 2439 230 31 7 chr20 48166754 48167307 -23986575 + L1ME2 LINE L1 5485 6050 -114 281 298 61 9 chr20 48167544 48167658 -23986224 + L2 LINE L2 3153 3272 0 880 119 11 38 chr20 48167791 48167976 -23985906 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 379 183 0 39 chr20 48167952 48168056 -23985826 + T-rich Low_complexity Low_complexity 4 103 0 * 25 0 0 0 chr20 48168197 48168222 -23985660 + AT_rich Low_complexity Low_complexity 1 25 0 2001 164 64 32 chr20 48168556 48168995 -23984887 + MLT1D LTR MaLR 1 453 -52 26 0 0 0 chr20 48169005 48169031 -23984851 + AT_rich Low_complexity Low_complexity 1 26 0 5804 94 14 8 chr20 48169060 48169071 -23984811 - L1PA10 LINE L1 -10 6158 6149 180 0 0 0 chr20 48169071 48169091 -23984791 + (TTTAA)n Simple_repeat Simple_repeat 3 22 0 5804 94 14 8 chr20 48169091 48169870 -23984012 - L1PA10 LINE L1 -19 6149 5363 16095 177 28 26 chr20 48169878 48173120 -23980762 - L1P3 LINE L1 -2259 4202 956 652 251 6 12 chr20 48173150 48173317 -23980565 - L1P3 LINE L1 -5705 170 5 238 286 14 14 chr20 48173317 48173387 -23980495 + MLT1D LTR MaLR 524 593 0 635 295 46 23 chr20 48173403 48173620 -23980262 - MIR SINE MIR -1 261 40 271 340 142 10 chr20 48174107 48174395 -23979487 + L2 LINE L2 2982 3307 -6 360 0 0 0 chr20 48174553 48174593 -23979289 + (CA)n Simple_repeat Simple_repeat 2 41 0 356 207 153 0 chr20 48175655 48175796 -23978086 + MIR SINE MIR 36 197 -63 311 272 0 0 chr20 48175802 48175883 -23977999 - L2 LINE L2 -8 3264 3184 791 193 42 0 chr20 48176320 48176486 -23977396 + MER5A DNA MER1_type 17 189 0 320 323 82 6 chr20 48177455 48177613 -23976269 + MIR SINE MIR 80 249 -13 1018 253 112 18 chr20 48177665 48178165 -23975717 - MLT1G LTR MaLR 0 530 1 233 73 0 24 chr20 48178946 48178987 -23974895 + (TTTTA)n Simple_repeat Simple_repeat 1 40 0 1683 63 18 5 chr20 48178987 48179209 -23974673 - L1PA4 LINE L1 -24 6131 5907 205 257 251 27 chr20 48179237 48179424 -23974458 + MIR SINE MIR 23 251 -11 455 231 68 59 chr20 48180365 48180586 -23973296 + L2 LINE L2 3074 3296 -17 593 246 192 0 chr20 48181032 48181235 -23972647 + MIR SINE MIR 21 262 0 426 288 52 101 chr20 48181234 48181513 -23972369 - L2 LINE L2 -33 3239 3005 * 1705 251 114 26 chr20 48181513 48182058 -23971824 - MLT1E LTR MaLR 0 593 1 426 288 52 101 chr20 48182058 48182333 -23971549 - L2 LINE L2 -267 3005 2718 2256 123 3 0 chr20 48182708 48183010 -23970872 - AluSx SINE Alu -9 303 1 242 299 167 56 chr20 48183024 48183057 -23970825 - MIR SINE MIR -2 260 232 2190 189 3 3 chr20 48183057 48183422 -23970460 - MLT1A1 LTR MaLR 0 365 1 242 299 167 56 chr20 48183422 48183622 -23970260 - MIR SINE MIR -30 232 1 253 228 70 0 chr20 48183938 48183995 -23969887 + MIR SINE MIR 56 116 -146 335 293 51 19 chr20 48184157 48184314 -23969568 + LTR16C LTR ERVL 228 389 -102 1294 198 17 34 chr20 48184342 48184640 -23969242 + L1MC4 LINE L1 7506 7798 -244 987 179 10 5 chr20 48184647 48184872 -23969010 + L1PA13 LINE L1 5878 6102 -64 738 57 28 0 chr20 48184877 48184983 -23968899 + L1PA15 LINE L1 6057 6165 0 1841 147 0 24 chr20 48184994 48185287 -23968595 + AluJb SINE Alu 1 286 -26 878 232 17 34 chr20 48185300 48185537 -23968345 + L1MC4 LINE L1 7809 8041 -1 248 174 22 0 chr20 48185538 48185584 -23968298 + LTR16C LTR ERVL 445 491 0 229 330 136 0 chr20 48185584 48185702 -23968180 + MIR SINE MIR 109 242 -20 211 289 0 0 chr20 48186218 48186270 -23967612 + L3 LINE CR1 1423 1474 -103 1713 178 100 25 chr20 48186313 48186673 -23967209 + MLT1B LTR MaLR 4 390 0 242 376 10 0 chr20 48186734 48186835 -23967047 + MER5B DNA MER1_type 1 102 -76 223 326 54 0 chr20 48186874 48186966 -23966916 + L2 LINE L2 3200 3296 -17 258 278 0 98 chr20 48187011 48187144 -23966738 + L2 LINE L2 3194 3313 0 263 278 65 0 chr20 48187273 48187381 -23966501 - L1ME4a LINE L1 -30 6091 5977 246 247 94 0 chr20 48187457 48187542 -23966340 - L1ME4a LINE L1 -265 5856 5764 587 115 0 0 chr20 48187654 48187732 -23966150 + MADE1 DNA Mariner 1 78 -2 381 235 46 33 chr20 48188037 48188190 -23965692 - L1ME4a LINE L1 0 6121 5967 218 143 54 18 chr20 48188425 48188481 -23965401 + (TA)n Simple_repeat Simple_repeat 2 59 0 1540 180 55 50 chr20 48188837 48189238 -23964644 - L1MD1 LINE L1 0 6636 6234 1742 280 47 29 chr20 48189285 48189838 -23964044 + MLT1E LTR MaLR 1 563 -30 1246 286 93 37 chr20 48189908 48191140 -23962742 - L1MD1 LINE L1 -345 6211 4910 1811 170 68 99 chr20 48191147 48191630 -23962252 + MLT1D LTR MaLR 14 481 -24 228 67 0 0 chr20 48191643 48191673 -23962209 + (TAGG)n Simple_repeat Simple_repeat 2 31 0 312 287 42 63 chr20 48191796 48192033 -23961849 - L1MD1 LINE L1 -3328 3212 2981 333 256 233 9 chr20 48192035 48192352 -23961530 - L1MD1 LINE L1 -3578 2962 2575 1855 154 0 37 chr20 48192779 48193103 -23960779 + AluJb SINE Alu 1 312 0 391 317 35 26 chr20 48193191 48193470 -23960412 - L1MD1 LINE L1 -838 2063 1716 325 258 54 115 chr20 48193476 48193771 -23960111 - L1MD1 LINE L1 -5096 1434 1158 1398 251 59 53 chr20 48194068 48194346 -23959536 - L1ME3 LINE L1 0 6162 5882 1976 80 94 7 chr20 48194346 48194622 -23959260 - AluSc SINE Alu -9 300 1 1398 251 59 53 chr20 48194622 48194874 -23959008 - L1ME3 LINE L1 -280 5882 5633 324 317 25 46 chr20 48194912 48195152 -23958730 - L1MC4a LINE L1 -104 6017 5781 216 330 0 10 chr20 48195750 48195847 -23958035 + CT-rich Low_complexity Low_complexity 1 96 0 2757 20 10 0 chr20 48196511 48196817 -23957065 - AluYa5 SINE Alu -2 309 1 917 273 18 0 chr20 48196916 48197136 -23956746 - MER58A DNA MER1_type 0 224 1 223 310 14 0 chr20 48197853 48197924 -23955958 - L2 LINE L2 0 3313 3242 810 303 180 43 chr20 48197968 48198217 -23955665 - L2 LINE L2 -237 3076 2862 2073 115 0 50 chr20 48198217 48198538 -23955344 + AluSq SINE Alu 1 305 -8 810 303 180 43 chr20 48198538 48198970 -23954912 - L2 LINE L2 -451 2862 2306 948 272 55 4 chr20 48199376 48199716 -23954166 + LTR16C LTR ERVL 97 491 0 316 184 125 22 chr20 48199800 48199936 -23953946 - L1ME4a LINE L1 -8 6113 5964 192 247 134 31 chr20 48200742 48200839 -23953043 - L2 LINE L2 -10 3262 3156 399 41 0 0 chr20 48201648 48201697 -23952185 + (GA)n Simple_repeat Simple_repeat 2 50 0 1101 246 69 65 chr20 48202456 48202752 -23951130 + MLT1H LTR MaLR 61 361 -188 2098 135 3 0 chr20 48202752 48203048 -23950834 - AluSq SINE Alu -16 297 1 1101 246 69 65 chr20 48203048 48203230 -23950652 + MLT1H LTR MaLR 361 541 -8 990 177 68 5 chr20 48204377 48204569 -23949313 - MLT2F LTR ERVL -2 661 458 4239 168 45 29 chr20 48204569 48205458 -23948424 + L1MB7 LINE L1 5279 6181 -3 904 246 33 6 chr20 48205476 48205854 -23948028 - MLT2F LTR ERVL -230 433 1 182 370 93 48 chr20 48205900 48206276 -23947606 - L2 LINE L2 -557 2757 2365 2181 71 4 0 chr20 48206286 48206581 -23947301 + AluY SINE Alu 13 308 0 213 154 0 0 chr20 48207629 48207668 -23946214 + (TG)n Simple_repeat Simple_repeat 2 40 0 657 246 63 0 chr20 48207858 48208033 -23945849 - MER119 DNA MER1_type -6 577 392 234 294 24 0 chr20 48208301 48208386 -23945496 + L2 LINE L2 3227 3313 0 244 266 0 25 chr20 48208453 48208532 -23945350 + (CATATA)n Simple_repeat Simple_repeat 5 81 0 505 274 0 35 chr20 48208587 48208700 -23945182 - MIR SINE MIR -145 117 9 262 244 130 57 chr20 48209175 48209298 -23944584 + MIR3 SINE MIR 37 168 -40 325 294 104 39 chr20 48209592 48209814 -23944068 - MIR SINE MIR -21 241 1 483 186 245 0 chr20 48209967 48210069 -23943813 + FLAM_C SINE Alu 3 129 -14 480 212 21 124 chr20 48210365 48210558 -23943324 - LTR16B LTR ERVL -7 457 285 305 388 50 0 chr20 48211086 48211207 -23942675 - L2 LINE L2 -3 3269 3143 238 185 92 15 chr20 48211310 48211375 -23942507 - MLT1K LTR MaLR -22 566 497 246 298 136 30 chr20 48211666 48211864 -23942018 - MLT1K LTR MaLR -10 578 360 260 254 0 0 chr20 48212008 48212063 -23941819 - MLT1K LTR MaLR -342 246 192 260 255 39 29 chr20 48212872 48212974 -23940908 + L2 LINE L2 2953 3055 -217 2593 58 0 0 chr20 48213146 48213457 -23940425 + AluY SINE Alu 1 311 0 243 236 0 0 chr20 48213937 48213992 -23939890 + MER103 DNA DNA 25 79 -87 468 0 0 0 chr20 48214053 48214105 -23939777 + (TA)n Simple_repeat Simple_repeat 1 52 0 1494 206 10 32 chr20 48214233 48214543 -23939339 - AluJo SINE Alu -9 303 1 183 129 0 0 chr20 48214652 48214683 -23939199 + (TC)n Simple_repeat Simple_repeat 1 31 0 4689 144 1 1 chr20 48215458 48216146 -23937736 - L1PA16 LINE L1 -10 6156 5469 2454 138 11 19 chr20 48216382 48216760 -23937122 + THE1C LTR MaLR 1 375 0 438 237 37 30 chr20 48216760 48216895 -23936987 - MIR SINE MIR -40 222 87 416 249 137 25 chr20 48217344 48217518 -23936364 + MLT1J2 LTR MaLR 55 249 -197 454 280 17 0 chr20 48217534 48217652 -23936230 + MLT1J1 LTR MaLR 327 446 0 323 266 129 36 chr20 48218041 48218180 -23935702 - MER112 DNA MER1_type -5 255 104 519 148 0 0 chr20 48218347 48218435 -23935447 + (TCCA)n Simple_repeat Simple_repeat 1 88 0 267 265 0 0 chr20 48218472 48218540 -23935342 - MER112 DNA MER1_type -185 75 8 2264 100 13 10 chr20 48218713 48219022 -23934860 - AluSg SINE Alu 0 310 1 206 171 0 0 chr20 48219392 48219427 -23934455 - L2 LINE L2 -12 3301 3267 252 312 46 105 chr20 48219924 48220478 -23933404 + L2 LINE L2 2715 3269 -3 457 288 147 9 chr20 48221081 48221296 -23932586 - MIR SINE MIR -1 261 14 183 129 0 0 chr20 48221570 48221601 -23932281 + (TCTA)n Simple_repeat Simple_repeat 2 32 0 204 364 64 29 chr20 48222453 48222593 -23931289 - L2 LINE L2 -224 3048 2904 184 338 26 26 chr20 48223406 48223483 -23930399 + MIR3 SINE MIR 118 194 -14 2433 68 0 0 chr20 48223531 48223827 -23930055 + AluY SINE Alu 1 296 -15 593 282 58 0 chr20 48223900 48224056 -23929826 - MIR SINE MIR -86 176 12 189 159 0 0 chr20 48224492 48224536 -23929346 + T-rich Low_complexity Low_complexity 2 45 0 187 326 51 10 chr20 48225459 48225557 -23928325 + MIR SINE MIR 104 205 -57 675 218 109 57 chr20 48225705 48225953 -23927929 + MIR SINE MIR 1 261 -1 376 276 55 14 chr20 48226833 48226978 -23926904 + MIR SINE MIR 2 152 -110 2097 108 3 3 chr20 48227572 48227868 -23926014 + AluY SINE Alu 1 296 -15 24 53 0 0 chr20 48228414 48228452 -23925430 + AT_rich Low_complexity Low_complexity 1 38 0 785 263 61 0 chr20 48229036 48229234 -23924648 - MER63A DNA MER1_type 0 210 1 232 259 0 17 chr20 48229397 48229455 -23924427 + GA-rich Low_complexity Low_complexity 1 57 0 722 322 92 29 chr20 48230317 48230952 -23922930 - L2 LINE L2 0 3313 2630 345 203 0 0 chr20 48231106 48231170 -23922712 + MIR SINE MIR 78 141 -67 21 36 0 0 chr20 48231474 48231502 -23922380 + AT_rich Low_complexity Low_complexity 1 28 0 317 203 24 0 chr20 48231581 48231674 -23922208 + L1ME3 LINE L1 5264 5355 -1004 873 301 65 8 chr20 48231791 48232176 -23921706 + L1ME3 LINE L1 5352 5758 -406 1803 174 0 13 chr20 48232228 48232533 -23921349 + AluSx SINE Alu 1 301 -11 282 264 8 16 chr20 48232676 48232797 -23921085 + L1ME3 LINE L1 6037 6156 -6 2122 108 0 0 chr20 48232846 48233123 -23920759 - AluSc SINE Alu -32 277 1 1109 172 29 70 chr20 48233446 48233816 -23920066 + MLT2B1 LTR ERVL 1 350 -64 359 185 0 9 chr20 48233819 48233927 -23919955 + (TAGA)n Simple_repeat Simple_repeat 1 107 0 262 211 0 115 chr20 48233932 48234036 -23919846 + L1MC4 LINE L1 6614 6705 -1337 279 133 0 0 chr20 48234054 48234099 -23919783 + MLT2B1 LTR ERVL 419 463 -1 3049 229 170 15 chr20 48234579 48235559 -23918323 + L1MC4 LINE L1 6768 7899 -143 347 264 161 55 chr20 48235762 48236141 -23917741 + L1ME4a LINE L1 5468 5886 -235 522 309 11 63 chr20 48236241 48236510 -23917372 + MLT1H LTR MaLR 97 351 -198 240 273 20 0 chr20 48236632 48236731 -23917151 + L1ME4a LINE L1 6005 6105 -16 316 294 49 54 chr20 48236854 48237058 -23916824 - MIR SINE MIR -13 249 47 1420 270 111 15 chr20 48237261 48237738 -23916144 + MLT1G1 LTR MaLR 73 595 0 204 241 0 0 chr20 48237760 48237818 -23916064 + GA-rich Low_complexity Low_complexity 4 61 0 550 246 43 101 chr20 48238493 48238700 -23915182 + LTR33A LTR ERVL 1 195 -328 549 136 0 0 chr20 48239260 48239363 -23914519 + (TCCA)n Simple_repeat Simple_repeat 1 103 0 195 236 28 56 chr20 48239440 48239512 -23914370 + MIR SINE MIR 65 134 -128 443 319 6 12 chr20 48239538 48239704 -23914178 + MIR SINE MIR 97 261 -1 309 26 0 0 chr20 48239704 48239742 -23914140 + (ATG)n Simple_repeat Simple_repeat 3 40 0 * 376 190 10 10 chr20 48239740 48239840 -23914042 + GA-rich Low_complexity Low_complexity 2 101 0 2397 87 0 3 chr20 48240657 48240967 -23912915 - AluSc SINE Alu 0 309 1 23 0 0 0 chr20 48241529 48241552 -23912330 + AT_rich Low_complexity Low_complexity 1 23 0 1261 150 4 77 chr20 48241567 48241813 -23912069 + AluJo SINE Alu 74 301 -11 228 224 0 52 chr20 48241815 48241873 -23912009 + GA-rich Low_complexity Low_complexity 6 60 0 1526 240 36 47 chr20 48241889 48242384 -23911498 - MLT1D LTR MaLR -15 490 1 321 304 0 73 chr20 48242404 48242501 -23911381 + MER5A DNA MER1_type 12 90 -99 2057 123 20 3 chr20 48242501 48242794 -23911088 - AluSq SINE Alu -15 298 1 321 304 0 73 chr20 48242794 48242887 -23910995 + MER5A DNA MER1_type 90 188 -1 1547 103 0 13 chr20 48243594 48243826 -23910056 + L1PA11 LINE L1 5946 6174 0 281 268 98 20 chr20 48243833 48243986 -23909896 - MIR SINE MIR -42 220 56 2061 196 51 5 chr20 48244406 48244819 -23909063 - MSTB1 LTR MaLR 0 432 1 378 171 43 0 chr20 48244842 48244912 -23908970 + MER116 DNA Mariner 6 78 -2 1988 142 6 22 chr20 48244980 48245296 -23908586 + AluSq SINE Alu 1 311 -2 204 40 0 0 chr20 48245314 48245339 -23908543 + (GAAA)n Simple_repeat Simple_repeat 3 27 0 372 297 19 34 chr20 48245499 48245708 -23908174 - L1MC4 LINE L1 -5 8037 7832 334 301 133 14 chr20 48245909 48246195 -23907687 - L2 LINE L2 -653 2661 2342 2195 138 0 0 chr20 48246236 48246548 -23907334 + AluJo SINE Alu 1 312 0 235 156 16 62 chr20 48248751 48248815 -23905067 + Looper DNA T2_type 149 209 -1349 282 259 31 0 chr20 48248816 48248919 -23904963 - L1MD2 LINE L1 -82 7726 6203 1182 244 86 41 chr20 48249252 48249694 -23904188 + MLT1C LTR MaLR 6 467 0 232 280 32 11 chr20 48249814 48249907 -23903975 - MIR SINE MIR -119 143 49 189 0 0 0 chr20 48250425 48250446 -23903436 + (TTTTTA)n Simple_repeat Simple_repeat 2 22 0 425 311 71 76 chr20 48250523 48251099 -23902783 - L1ME4a LINE L1 -94 6027 5444 239 228 36 48 chr20 48251145 48251242 -23902640 + L1ME3A LINE L1 6071 6170 0 2138 114 3 3 chr20 48251245 48251544 -23902338 + AluSx SINE Alu 1 299 -13 707 280 54 57 chr20 48251723 48252094 -23901788 - L2 LINE L2 -420 2894 2525 2230 130 0 3 chr20 48253401 48253708 -23900174 - AluSg SINE Alu -4 306 1 513 255 81 37 chr20 48253788 48254110 -23899772 + L1MC4a LINE L1 5613 5948 -1860 38 0 0 0 chr20 48254299 48254337 -23899545 + AT_rich Low_complexity Low_complexity 1 38 0 624 180 55 16 chr20 48254920 48255048 -23898834 + L1ME3A LINE L1 6030 6162 -8 2325 104 0 0 chr20 48255406 48255705 -23898177 - AluSx SINE Alu -13 299 1 230 316 44 52 chr20 48255883 48256019 -23897863 + MER5A DNA MER1_type 7 141 -48 274 319 76 17 chr20 48256137 48256256 -23897626 + L2 LINE L2 3133 3258 -14 225 0 0 0 chr20 48256257 48256282 -23897600 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 364 307 80 6 chr20 48256634 48256797 -23897085 + MIR SINE MIR 3 177 -85 332 278 30 53 chr20 48256809 48256942 -23896940 - L2 LINE L2 -2 3311 3182 216 0 0 0 chr20 48257706 48257730 -23896152 + (TG)n Simple_repeat Simple_repeat 1 24 0 585 291 81 9 chr20 48259868 48260091 -23893791 - MIR SINE MIR -15 247 9 241 289 74 30 chr20 48260134 48260269 -23893613 + L1ME4a LINE L1 5522 5662 -504 344 302 97 35 chr20 48260318 48260427 -23893455 + L1ME4a LINE L1 5669 5770 -351 2542 62 0 3 chr20 48260427 48260733 -23893149 + AluY SINE Alu 1 305 -6 344 302 97 35 chr20 48260733 48260881 -23893001 + L1ME4a LINE L1 5770 5942 -179 234 287 90 41 chr20 48261495 48261617 -23892265 + MIR3 SINE MIR 60 187 -21 191 196 0 43 chr20 48262386 48262432 -23891450 + L2 LINE L2 3218 3261 -11 2644 36 3 10 chr20 48263171 48263480 -23890402 + AluY SINE Alu 1 307 -4 529 294 31 0 chr20 48263492 48263652 -23890230 + MIR SINE MIR 81 245 -17 392 238 6 0 chr20 48264097 48264265 -23889617 + (TG)n Simple_repeat Simple_repeat 2 170 0 310 278 33 11 chr20 48264435 48264525 -23889357 + L2 LINE L2 3181 3272 0 1112 196 108 30 chr20 48265804 48266100 -23887782 - MER2 DNA MER2_type -25 320 2 24 53 0 0 chr20 48266388 48266426 -23887456 + AT_rich Low_complexity Low_complexity 1 38 0 579 114 41 63 chr20 48266430 48266588 -23887294 - L1PA8A LINE L1 -93 6038 5889 1119 198 10 0 chr20 48266887 48267094 -23886788 - MER3 DNA MER1_type 0 209 1 760 287 64 94 chr20 48267144 48267226 -23886656 + LTR33 LTR ERVL 33 116 -405 2716 133 5 38 chr20 48267226 48267670 -23886212 - L1PA15 LINE L1 -1 6164 5736 760 287 64 94 chr20 48267670 48267964 -23885918 + LTR33 LTR ERVL 116 395 -126 2197 130 0 9 chr20 48267964 48268279 -23885603 - AluSq SINE Alu -1 312 1 760 287 64 94 chr20 48268279 48268382 -23885500 + LTR33 LTR ERVL 395 499 -22 842 252 68 19 chr20 48268547 48268753 -23885129 - MER58A DNA MER1_type 0 224 9 22 70 0 0 chr20 48268781 48268824 -23885058 + AT_rich Low_complexity Low_complexity 1 43 0 228 163 0 0 chr20 48268824 48268867 -23885015 + (TG)n Simple_repeat Simple_repeat 2 44 0 329 286 116 34 chr20 48269495 48269642 -23884240 + L1ME3A LINE L1 5725 5883 -238 304 290 53 0 chr20 48269848 48269979 -23883903 - MIR SINE MIR -74 188 51 211 205 0 0 chr20 48270566 48270605 -23883277 + A-rich Low_complexity Low_complexity 5 43 0 834 214 81 37 chr20 48271121 48271392 -23882490 + L1ME3A LINE L1 5877 6159 -11 637 20 40 10 chr20 48271392 48271492 -23882390 + (TAGA)n Simple_repeat Simple_repeat 2 104 0 254 242 158 21 chr20 48271612 48271707 -23882175 - L2 LINE L2 -614 2700 2593 2325 92 0 3 chr20 48271715 48272008 -23881874 + AluSc SINE Alu 1 292 -17 274 255 19 113 chr20 48273362 48273572 -23880310 + MLT1H LTR MaLR 95 312 -237 234 277 34 101 chr20 48273592 48273711 -23880171 + MLT1H LTR MaLR 439 549 0 525 194 62 23 chr20 48273871 48274000 -23879882 - MER94 DNA DNA 0 134 1 1924 144 21 0 chr20 48274669 48274954 -23878928 + AluSx SINE Alu 1 291 -21 1436 28 6 0 chr20 48274979 48275156 -23878726 + (GGAA)n Simple_repeat Simple_repeat 2 179 0 2162 150 9 15 chr20 48275414 48275754 -23878128 + MER2 DNA MER2_type 1 338 -7 655 142 0 94 chr20 48275772 48275899 -23877983 - FLAM_C SINE Alu -26 117 3 305 333 147 13 chr20 48276219 48276615 -23877267 + L2 LINE L2 2422 2870 -444 199 350 68 0 chr20 48276861 48276978 -23876904 + L2 LINE L2 3141 3265 -7 453 237 30 15 chr20 48277008 48277139 -23876743 - L2 LINE L2 -1 3312 3180 377 305 47 0 chr20 48278663 48278791 -23875091 - MIR SINE MIR -73 189 56 1031 249 4 4 chr20 48278864 48279105 -23874777 + MIR SINE MIR 12 252 -10 191 351 30 18 chr20 48279248 48279416 -23874466 - MIR SINE MIR -70 192 23 224 82 0 61 chr20 48279837 48279886 -23873996 + (T)n Simple_repeat Simple_repeat 1 46 0 252 86 0 0 chr20 48280623 48280658 -23873224 + (TG)n Simple_repeat Simple_repeat 2 36 0 422 297 56 20 chr20 48281175 48281370 -23872512 - L1ME LINE L1 -335 5786 5585 735 232 17 0 chr20 48281675 48281852 -23872030 - LTR33 LTR ERVL -13 508 329 511 204 11 108 chr20 48282593 48282769 -23871113 - MIR SINE MIR -72 190 32 285 254 68 83 chr20 48282956 48283161 -23870721 + L2 LINE L2 2955 3156 -157 202 93 23 23 chr20 48283163 48283206 -23870676 + (TG)n Simple_repeat Simple_repeat 1 43 0 328 312 0 50 chr20 48283264 48283357 -23870525 + L2 LINE L2 3134 3219 -53 2160 162 87 12 chr20 48283357 48283759 -23870123 + MSTB1 LTR MaLR 1 432 0 328 312 0 50 chr20 48283759 48283806 -23870076 + L2 LINE L2 3219 3267 -5 454 328 77 0 chr20 48284914 48285109 -23868773 + MIR SINE MIR 4 213 -49 771 125 86 0 chr20 48285110 48285238 -23868644 + MER85 DNA T2_type 1 139 0 233 241 69 23 chr20 48286248 48286335 -23867547 + MER91C DNA MER1_type 25 115 -25 360 351 40 9 chr20 48286776 48287004 -23866878 - MIR SINE MIR -6 256 22 234 259 0 0 chr20 48287293 48287347 -23866535 + L2 LINE L2 3002 3055 -217 255 61 0 0 chr20 48288007 48288040 -23865842 + (TGAA)n Simple_repeat Simple_repeat 2 34 0 2406 64 3 7 chr20 48289829 48290125 -23863757 + AluY SINE Alu 1 295 -16 639 283 122 23 chr20 48290552 48290856 -23863026 - L1MC4a LINE L1 -1895 5913 5580 1615 167 0 16 chr20 48290856 48291114 -23862768 - AluJb SINE Alu -58 254 1 482 286 183 14 chr20 48292211 48292501 -23861381 + L2 LINE L2 2967 3305 -8 1389 205 94 24 chr20 48294621 48294992 -23858890 - L1ME2 LINE L1 -214 5950 5554 1567 203 3 30 chr20 48295219 48295353 -23858529 + AluJb SINE Alu 1 137 -175 2599 50 0 0 chr20 48295353 48295652 -23858230 + AluY SINE Alu 1 299 -12 1567 203 3 30 chr20 48295652 48295812 -23858070 + AluJb SINE Alu 137 287 -25 243 297 70 39 chr20 48295844 48295972 -23857910 + MIR SINE MIR 117 248 -14 321 26 0 0 chr20 48296041 48296079 -23857803 + (TC)n Simple_repeat Simple_repeat 1 38 0 423 298 103 60 chr20 48297273 48297555 -23856327 + MLT1K LTR MaLR 261 554 -34 1930 204 14 40 chr20 48299470 48299969 -23853913 + Charlie4a DNA MER1_type 23 508 0 687 89 0 0 chr20 48300177 48300267 -23853615 + FLAM_C SINE Alu 35 124 -19 441 0 0 0 chr20 48300275 48300324 -23853558 + (CA)n Simple_repeat Simple_repeat 2 50 0 502 305 72 41 chr20 48300520 48301078 -23852804 - L1ME4a LINE L1 -73 6048 5474 21 36 0 0 chr20 48301078 48301106 -23852776 + AT_rich Low_complexity Low_complexity 1 28 0 747 239 15 20 chr20 48301258 48301455 -23852427 + MLT1H LTR MaLR 354 549 0 254 179 62 89 chr20 48301497 48301609 -23852273 - L1ME4a LINE L1 -76 6045 5937 344 342 68 55 chr20 48301615 48302232 -23851650 + L1ME4a LINE L1 3692 4316 -1830 441 301 36 0 chr20 48302371 48302567 -23851315 + L1ME4a LINE L1 5724 5926 -195 570 258 13 7 chr20 48303113 48303264 -23850618 + MIR SINE MIR 37 188 -74 257 217 72 0 chr20 48303519 48303588 -23850294 + MER53 DNA DNA 1 74 -115 262 289 11 22 chr20 48303634 48303724 -23850158 + L2 LINE L2 3225 3313 0 1009 270 186 48 chr20 48303736 48304296 -23849586 - MLT2F LTR ERVL -25 638 2 4325 258 83 40 chr20 48304298 48305174 -23848708 - ERVL-F LTR ERVL -9 5755 4783 2045 156 0 0 chr20 48305174 48305462 -23848420 + AluSx SINE Alu 1 288 -24 4325 258 83 40 chr20 48305462 48306124 -23847758 - ERVL-F LTR ERVL -981 4783 4151 205 244 200 26 chr20 48306981 48307096 -23846786 + MIR SINE MIR 57 191 -71 1849 89 0 12 chr20 48307395 48307641 -23846241 - AluY SINE Alu -7 304 62 215 265 36 12 chr20 48307709 48307792 -23846090 + MER5A DNA MER1_type 8 92 -97 286 271 43 0 chr20 48308996 48309066 -23844816 + polypurine Low_complexity Low_complexity 3 75 0 314 318 201 0 chr20 48310505 48310659 -23843223 - MER5A DNA MER1_type -1 188 4 502 268 46 12 chr20 48310982 48311158 -23842724 + MIR SINE MIR 56 231 -31 321 254 69 46 chr20 48311736 48311866 -23842016 - MER94 DNA DNA -1 133 1 34 24 0 0 chr20 48311949 48311990 -23841892 + AT_rich Low_complexity Low_complexity 1 41 0 660 266 52 31 chr20 48311990 48312254 -23841628 + MLT1G1 LTR MaLR 10 319 -276 439 304 88 0 chr20 48312306 48312454 -23841428 + MLT1G1 LTR MaLR 426 586 -9 192 40 0 0 chr20 48312568 48312593 -23841289 + (TA)n Simple_repeat Simple_repeat 1 25 0 243 203 0 0 chr20 48312593 48312657 -23841225 - L1MC4 LINE L1 -1339 6703 6640 328 311 16 82 chr20 48313165 48313471 -23840411 - L2 LINE L2 0 3272 2987 471 277 29 0 chr20 48313736 48313873 -23840009 + L2 LINE L2 2919 3059 -213 196 241 17 17 chr20 48314281 48314339 -23839543 + MIR SINE MIR 109 166 -96 279 212 30 20 chr20 48314944 48315043 -23838839 + (TTTA)n Simple_repeat Simple_repeat 4 103 0 254 228 33 33 chr20 48315005 48315097 -23838785 + (TTCA)n Simple_repeat Simple_repeat 1 92 0 * 298 200 0 38 chr20 48315120 48315225 -23838657 + (TTTA)n Simple_repeat Simple_repeat 2 102 0 574 136 18 27 chr20 48315310 48315420 -23838462 - MER33 DNA MER1_type 0 363 255 26 64 0 0 chr20 48315474 48315521 -23838361 + AT_rich Low_complexity Low_complexity 1 47 0 1057 193 29 0 chr20 48315534 48315741 -23838141 - MER33 DNA MER1_type -111 213 1 204 100 0 0 chr20 48316493 48316523 -23837359 - MIR SINE MIR -118 144 115 3526 77 0 4 chr20 48316740 48317207 -23836675 + L1PA8 LINE L1 5707 6171 -1 217 167 24 0 chr20 48317786 48317828 -23836054 + GA-rich Low_complexity Low_complexity 1 43 0 226 200 31 15 chr20 48318023 48318088 -23835794 + GA-rich Low_complexity Low_complexity 1 66 0 351 255 57 25 chr20 48318105 48318262 -23835620 + L2 LINE L2 2901 3062 -251 474 252 152 9 chr20 48320115 48320325 -23833557 - MIR SINE MIR -10 252 13 184 330 62 18 chr20 48320480 48320592 -23833290 - L2 LINE L2 -168 3104 2988 345 287 116 6 chr20 48320718 48320882 -23833000 + MIR SINE MIR 47 228 -34 387 224 36 62 chr20 48321040 48321201 -23832681 + MIR SINE MIR 17 170 -62 294 242 40 20 chr20 48322057 48322156 -23831726 - L1ME4a LINE L1 -86 6035 5935 213 276 81 11 chr20 48322259 48322346 -23831536 + MIR SINE MIR 36 128 -80 389 273 89 59 chr20 48322427 48322764 -23831118 - L1ME4a LINE L1 -213 5908 5562 184 294 0 0 chr20 48322986 48323037 -23830845 - MIR SINE MIR -63 145 95 197 315 0 14 chr20 48323108 48323181 -23830701 + L2 LINE L2 2681 2752 -562 233 290 18 112 chr20 48323204 48323344 -23830538 + L2 LINE L2 2877 2990 -282 693 168 8 24 chr20 48323344 48323469 -23830413 - FLAM_A SINE Alu -10 123 1 233 290 18 112 chr20 48323469 48323552 -23830330 + L2 LINE L2 2990 3079 -193 685 190 32 36 chr20 48323630 48323828 -23830054 + MER6 DNA MER2_type -65 862 -3 255 307 139 7 chr20 48324101 48324238 -23829644 + MIR SINE MIR 28 182 -80 288 343 19 0 chr20 48324759 48324864 -23829018 - L2 LINE L2 -18 3254 3148 1641 182 10 7 chr20 48325177 48325474 -23828408 - AluJb SINE Alu -10 302 5 211 231 0 0 chr20 48325539 48325578 -23828304 + polypurine Low_complexity Low_complexity 1 39 0 623 209 17 6 chr20 48325578 48325755 -23828127 + GA-rich Low_complexity Low_complexity 2 180 0 187 279 103 0 chr20 48325822 48325890 -23827992 - L2 LINE L2 -50 3263 3189 327 250 146 7 chr20 48325970 48326114 -23827768 - MER103 DNA DNA -1 165 2 369 294 106 6 chr20 48326789 48326959 -23826923 + MIR SINE MIR 76 262 0 256 132 132 59 chr20 48327334 48327402 -23826480 + MLT1G LTR MaLR 514 586 -4 500 272 88 0 chr20 48328168 48328315 -23825567 - MIR SINE MIR -24 238 79 232 318 24 0 chr20 48328511 48328596 -23825286 + L2 LINE L2 2606 2692 -622 379 326 11 37 chr20 48329036 48329223 -23824659 + L2 LINE L2 2898 3079 -193 1804 127 4 4 chr20 48329724 48329991 -23823891 - AluSx SINE Alu -1 311 45 600 237 58 143 chr20 48330021 48330490 -23823392 + L2 LINE L2 2885 3313 0 7804 47 2 0 chr20 48330902 48332290 -23821592 - L1PA6 LINE L1 0 6154 4766 2761 165 0 56 chr20 48332470 48332992 -23820890 + L1MB3 LINE L1 5684 6176 -7 211 286 63 16 chr20 48333049 48333112 -23820770 + MIR SINE MIR 36 101 -107 279 217 0 60 chr20 48333125 48333208 -23820674 - LTR33A LTR ERVL -2 521 444 391 200 55 18 chr20 48333635 48333745 -23820137 + MIR SINE MIR 107 220 -42 335 319 108 32 chr20 48333766 48334045 -23819837 + L2 LINE L2 2921 3220 -93 263 207 0 17 chr20 48334552 48334610 -23819272 + MIR SINE MIR 99 155 -107 561 244 0 0 chr20 48335226 48335386 -23818496 + CT-rich Low_complexity Low_complexity 2 161 0 314 263 95 15 chr20 48336000 48336137 -23817745 + L3 LINE CR1 1371 1518 -59 372 292 139 23 chr20 48336368 48336584 -23817298 + MIR SINE MIR 18 258 -4 461 287 94 6 chr20 48337133 48337314 -23816568 + MIR SINE MIR 21 217 -45 748 249 82 87 chr20 48337406 48337784 -23816098 - MLT1I LTR MaLR 0 409 24 525 236 112 41 chr20 48338843 48339063 -23814819 - MIR SINE MIR -10 252 15 193 353 79 57 chr20 48339439 48339895 -23813987 + L2 LINE L2 2512 2977 -337 184 317 63 56 chr20 48340526 48340668 -23813214 + L2 LINE L2 3163 3305 -8 303 284 174 55 chr20 48341730 48341931 -23811951 + MIR SINE MIR 38 262 0 448 267 187 16 chr20 48342595 48342782 -23811100 - MIR SINE MIR -20 242 24 1183 154 18 59 chr20 48342783 48343004 -23810878 - AluSg/x SINE Alu -14 298 87 4365 138 2 6 chr20 48343050 48343694 -23810188 - L1PA13 LINE L1 -11 6152 5512 440 184 58 19 chr20 48344131 48344234 -23809648 - MIR SINE MIR -77 185 79 423 375 19 9 chr20 48344837 48345053 -23808829 + Charlie8 DNA MER1_type 3 220 -2197 284 222 111 0 chr20 48345173 48345245 -23808637 - MIR SINE MIR -115 147 68 417 249 6 18 chr20 48345706 48345875 -23808007 + (CATATA)n Simple_repeat Simple_repeat 6 172 0 306 227 5 49 chr20 48345887 48346072 -23807810 + (CATA)n Simple_repeat Simple_repeat 2 178 0 198 167 0 0 chr20 48346112 48346148 -23807734 + GA-rich Low_complexity Low_complexity 2 37 0 588 311 16 26 chr20 48346192 48346385 -23807497 - MIR SINE MIR -20 242 52 333 312 92 36 chr20 48346421 48346671 -23807211 - L2 LINE L2 -31 3282 3019 269 233 11 0 chr20 48346850 48346940 -23806942 + (CATA)n Simple_repeat Simple_repeat 4 94 0 914 254 38 0 chr20 48347769 48347978 -23805904 - MLT1C LTR MaLR 0 467 251 338 327 48 98 chr20 48348084 48348695 -23805187 + L2 LINE L2 2680 3263 -9 208 255 149 32 chr20 48348820 48348914 -23804968 + MIR SINE MIR 33 137 -71 561 193 78 34 chr20 48348972 48349121 -23804761 - MIR SINE MIR -65 143 33 369 286 0 54 chr20 48349156 48349268 -23804614 - L2 LINE L2 -15 3298 3193 256 153 17 34 chr20 48350261 48350320 -23803562 - MIR SINE MIR -119 143 86 339 306 130 21 chr20 48351105 48351275 -23802607 - MIR SINE MIR -65 143 1 408 268 62 9 chr20 48351631 48351743 -23802139 - L2 LINE L2 -5 3267 3150 1417 203 158 3 chr20 48351971 48352287 -23801595 - MLT1A1 LTR MaLR 0 365 1 444 303 64 82 chr20 48353223 48353544 -23800338 - L2 LINE L2 -2 3270 2956 425 309 139 9 chr20 48353544 48353774 -23800108 + MIR SINE MIR 2 261 -1 193 319 22 0 chr20 48353995 48354086 -23799796 - L2 LINE L2 -719 2595 2503 1580 217 30 40 chr20 48354087 48354488 -23799394 + MLT2C1 LTR ERVL 1 397 0 3179 157 35 12 chr20 48354490 48355058 -23798824 + L1MA10 LINE L1 5754 6334 0 12181 155 17 7 chr20 48355220 48358407 -23795475 + L1MA2 LINE L1 3088 6304 0 1999 144 56 39 chr20 48358420 48358830 -23795052 + L1MA9 LINE L1 5894 6310 -2 565 276 82 15 chr20 48359228 48359424 -23794458 - MIR SINE MIR -14 248 40 319 294 0 59 chr20 48361008 48361110 -23792772 - L2 LINE L2 -182 3090 2995 323 302 47 30 chr20 48361241 48361473 -23792409 - L2 LINE L2 -556 2758 2523 2240 196 99 11 chr20 48361521 48361985 -23791897 + MLT1D LTR MaLR 1 505 0 257 350 45 68 chr20 48362612 48362832 -23791050 + MIR SINE MIR 21 235 -27 406 290 186 34 chr20 48364031 48364300 -23789582 + L2 LINE L2 3002 3311 -2 186 43 0 0 chr20 48364300 48364323 -23789559 + (TGAA)n Simple_repeat Simple_repeat 3 25 0 303 164 0 0 chr20 48364555 48364616 -23789266 + (CA)n Simple_repeat Simple_repeat 1 61 0 1186 181 23 19 chr20 48364656 48364871 -23789011 + MER20 DNA MER1_type 3 218 -1 417 257 37 17 chr20 48365106 48365241 -23788641 - MIR SINE MIR -63 145 9 189 0 0 0 chr20 48365410 48365431 -23788451 + (CTG)n Simple_repeat Simple_repeat 3 23 0 465 285 8 15 chr20 48366003 48366133 -23787749 - L2 LINE L2 0 3313 3185 906 197 111 144 chr20 48366549 48366908 -23786974 - Charlie2 DNA MER1_type -118 2744 2374 1077 82 7 7 chr20 48366908 48367053 -23786829 + L1PA13 LINE L1 6013 6158 -5 906 197 111 144 chr20 48367053 48367489 -23786393 - Charlie2 DNA MER1_type -488 2374 1976 429 274 164 36 chr20 48367485 48367766 -23786116 - Charlie2 DNA MER1_type -2545 317 1 * 372 283 12 54 chr20 48368020 48368186 -23785696 - L2 LINE L2 -203 3069 2911 183 275 107 69 chr20 48368329 48368460 -23785422 - L3 LINE CR1 -495 1082 947 200 263 0 0 chr20 48370697 48370735 -23783147 - L2 LINE L2 -97 3175 3138 663 318 28 56 chr20 48370923 48371313 -23782569 - MLT1J2 LTR MaLR -42 408 30 30 83 0 0 chr20 48372112 48372184 -23781698 + AT_rich Low_complexity Low_complexity 1 72 0 204 40 0 0 chr20 48372280 48372305 -23781577 + (GGAA)n Simple_repeat Simple_repeat 1 25 0 359 237 68 68 chr20 48372537 48372655 -23781227 - L2 LINE L2 0 3313 3196 361 235 118 10 chr20 48372690 48372792 -23781090 - MER5A DNA MER1_type -76 113 1 2382 100 3 0 chr20 48373563 48373872 -23780010 - AluSp SINE Alu -3 310 1 735 110 37 170 chr20 48374614 48374832 -23779050 + MER53 DNA DNA 1 189 0 396 335 89 36 chr20 48375260 48375484 -23778398 + L2 LINE L2 3033 3268 -4 387 0 0 0 chr20 48375502 48375545 -23778337 + (TGGA)n Simple_repeat Simple_repeat 4 46 0 1427 240 43 39 chr20 48375600 48376067 -23777815 + L1ME2 LINE L1 5684 6152 -12 399 254 41 77 chr20 48376107 48376327 -23777555 + L1MC4 LINE L1 7830 8041 -1 16173 147 18 42 chr20 48377059 48378608 -23775274 - L1 LINE L1 -3055 4510 2927 2330 110 0 0 chr20 48378608 48378908 -23774974 - AluY SINE Alu -11 300 1 16173 147 18 42 chr20 48378908 48380991 -23772891 - L1 LINE L1 -4638 2927 964 937 154 51 75 chr20 48380990 48381119 -23772763 - L1MA7 LINE L1 -384 5907 5783 * 333 0 0 0 chr20 48381119 48381156 -23772726 + (TG)n Simple_repeat Simple_repeat 2 38 0 937 154 51 75 chr20 48381156 48381240 -23772642 - L1MA7 LINE L1 -508 5783 5699 888 182 0 0 chr20 48381258 48381401 -23772481 - L1M1 LINE L1 -5851 1714 1572 2166 154 21 10 chr20 48381424 48381807 -23772075 - L1MA7 LINE L1 -585 5706 5320 284 228 25 0 chr20 48381830 48381909 -23771973 - L1MC4 LINE L1 -1345 6697 6617 * 3300 254 74 34 chr20 48381898 48384497 -23769385 - L1M4 LINE L1 -3688 3479 1095 1621 168 7 14 chr20 48384503 48384798 -23769084 - L1M4 LINE L1 -6743 348 1 199 394 0 0 chr20 48385185 48385251 -23768631 + MIR3 SINE MIR 90 155 -53 403 302 86 74 chr20 48385326 48385770 -23768112 - L1M4 LINE L1 -1830 4316 3868 481 272 124 49 chr20 48386889 48387197 -23766685 - LTR16A1 LTR ERVL 0 483 156 246 270 14 54 chr20 48387380 48387454 -23766428 + MER5B DNA MER1_type 59 129 -49 336 309 0 65 chr20 48387840 48387963 -23765919 - L2 LINE L2 0 3313 3199 664 289 57 41 chr20 48389737 48389983 -23763899 + MLT1K LTR MaLR 2 251 -337 248 351 132 0 chr20 48390110 48390224 -23763658 + L2 LINE L2 3137 3265 -7 214 363 60 12 chr20 48391112 48391280 -23762602 + MIR SINE MIR 31 206 -56 250 298 41 53 chr20 48391456 48391627 -23762255 - L2 LINE L2 -188 3084 2916 4254 159 43 36 chr20 48391761 48392312 -23761570 + L1MA9 LINE L1 5406 5967 -345 228 35 0 0 chr20 48392312 48392341 -23761541 + (CAA)n Simple_repeat Simple_repeat 2 30 0 4254 159 43 36 chr20 48392341 48392648 -23761234 + L1MA9 LINE L1 5967 6270 -42 185 324 29 0 chr20 48392664 48392732 -23761150 - MER5A DNA MER1_type -99 90 21 182 367 34 11 chr20 48393058 48393235 -23760647 - L2 LINE L2 -640 2674 2494 284 337 20 20 chr20 48393540 48393641 -23760241 + MIR SINE MIR 55 155 -107 378 278 84 60 chr20 48394081 48394380 -23759502 - L2 LINE L2 -356 2958 2653 194 268 10 82 chr20 48394338 48394435 -23759447 + MIR SINE MIR 163 252 -10 * 1339 189 53 13 chr20 48395217 48395519 -23758363 + MER33 DNA MER1_type 6 319 -5 537 293 31 40 chr20 48395673 48395895 -23757987 + MIR SINE MIR 10 229 -33 252 111 0 0 chr20 48396021 48396066 -23757816 + (TTCA)n Simple_repeat Simple_repeat 1 45 0 187 237 26 0 chr20 48397319 48397357 -23756525 + L2 LINE L2 3215 3253 -19 361 349 10 36 chr20 48397412 48397604 -23756278 - MER5A DNA MER1_type -2 187 1 236 293 27 0 chr20 48398001 48398076 -23755806 + L2 LINE L2 3234 3310 -3 206 119 48 0 chr20 48398343 48398385 -23755497 + GA-rich Low_complexity Low_complexity 3 46 0 208 402 17 8 chr20 48398495 48398612 -23755270 - MIR SINE MIR -70 138 21 230 279 33 116 chr20 48398626 48398841 -23755041 - MER117 DNA MER1_type 0 197 1 552 245 192 24 chr20 48399055 48399263 -23754619 - MIR SINE MIR 0 262 20 563 245 155 0 chr20 48400374 48400529 -23753353 + MER5A DNA MER1_type 4 182 -7 207 100 0 0 chr20 48400829 48400859 -23753023 + (TTA)n Simple_repeat Simple_repeat 1 30 0 1093 264 42 28 chr20 48401353 48401644 -23752238 + MLT1C LTR MaLR 7 386 -236 1764 118 23 0 chr20 48401644 48401907 -23751975 + L1MA2 LINE L1 6036 6304 0 1093 264 42 28 chr20 48401907 48402029 -23751853 + MLT1C LTR MaLR 386 505 -117 2152 111 3 7 chr20 48402176 48402473 -23751409 - AluSc SINE Alu -13 296 1 252 250 17 0 chr20 48403199 48403259 -23750623 - L2 LINE L2 0 3272 3212 189 291 0 36 chr20 48403262 48403317 -23750565 + L2 LINE L2 2710 2762 -552 926 200 0 27 chr20 48403327 48403512 -23750370 - MER58A DNA MER1_type 0 224 45 270 320 66 86 chr20 48403625 48404034 -23749848 + L2 LINE L2 2851 3251 -62 198 294 88 0 chr20 48404131 48404199 -23749683 - L2 LINE L2 -84 3188 3115 2212 122 0 0 chr20 48404209 48404503 -23749379 + AluSx SINE Alu 11 304 -8 2395 82 0 3 chr20 48404695 48404998 -23748884 + AluY SINE Alu 1 302 -9 467 261 191 0 chr20 48405037 48405194 -23748688 - MIR SINE MIR -29 233 47 364 254 192 15 chr20 48406818 48406948 -23746934 - MIR SINE MIR 0 262 110 1801 249 63 45 chr20 48406949 48407318 -23746564 - MLT1G LTR MaLR 0 590 206 1930 153 52 36 chr20 48407318 48407683 -23746199 + THE1C LTR MaLR 5 375 0 1801 249 63 45 chr20 48407683 48407884 -23745998 - MLT1G LTR MaLR -384 206 10 327 296 26 17 chr20 48407886 48408001 -23745881 - MIR SINE MIR -144 118 3 693 298 48 8 chr20 48409172 48409420 -23744462 - LTR16C LTR ERVL 0 491 234 482 308 30 30 chr20 48409680 48409878 -23744004 - MIR SINE MIR -62 200 3 477 76 0 0 chr20 48410779 48410845 -23743037 + (TTCA)n Simple_repeat Simple_repeat 3 68 0 884 335 80 50 chr20 48410876 48411090 -23742792 - L2 LINE L2 -31 3282 3076 1998 118 21 0 chr20 48411090 48411378 -23742504 + AluSg1 SINE Alu 1 294 -15 884 335 80 50 chr20 48411378 48411930 -23741952 - L2 LINE L2 -237 3076 2496 485 334 63 65 chr20 48412834 48413247 -23740635 + L2 LINE L2 2860 3271 -1 309 197 132 0 chr20 48413564 48413640 -23740242 - MIR SINE MIR -11 251 166 457 292 36 41 chr20 48413658 48413877 -23740005 - L2 LINE L2 0 3313 3096 327 251 63 57 chr20 48413907 48414082 -23739800 - MLT1J1 LTR MaLR -250 196 21 435 354 71 28 chr20 48414109 48414455 -23739427 - L2 LINE L2 -276 2996 2615 250 314 74 25 chr20 48414688 48414809 -23739073 + MIR SINE MIR 15 141 -121 336 228 87 78 chr20 48414833 48415168 -23738714 - MLT1I LTR MaLR -27 382 1 211 269 86 65 chr20 48415173 48415266 -23738616 + MIR SINE MIR 163 257 -5 432 0 0 0 chr20 48415278 48415326 -23738556 + (TA)n Simple_repeat Simple_repeat 1 48 0 352 288 83 8 chr20 48415467 48415599 -23738283 + MIR SINE MIR 47 188 -74 180 351 14 0 chr20 48415838 48415912 -23737970 + L2 LINE L2 2896 2970 -302 197 354 165 0 chr20 48416236 48416363 -23737519 - L2 LINE L2 -573 2741 2594 2196 175 49 57 chr20 48416955 48417129 -23736753 - L1MC2 LINE L1 -8 6336 6162 1936 143 7 0 chr20 48417129 48417441 -23736441 - AluSx SINE Alu 0 314 1 2196 175 49 57 chr20 48417441 48417774 -23736108 - L1MC2 LINE L1 -182 6162 5832 264 170 0 0 chr20 48417785 48417838 -23736044 + (CA)n Simple_repeat Simple_repeat 1 53 0 282 224 17 0 chr20 48419530 48419588 -23734294 - MIR SINE MIR -81 181 123 292 267 114 15 chr20 48420532 48420663 -23733219 + MIR3 SINE MIR 41 184 -24 258 254 30 0 chr20 48421246 48421313 -23732569 - MIR SINE MIR -4 258 190 21 0 0 0 chr20 48421369 48421390 -23732492 + AT_rich Low_complexity Low_complexity 1 21 0 481 146 21 0 chr20 48422461 48422557 -23731325 + L1PA16 LINE L1 6069 6166 0 32 67 0 0 chr20 48422977 48423037 -23730845 + AT_rich Low_complexity Low_complexity 1 60 0 510 284 76 28 chr20 48423173 48423423 -23730459 - L1MC2 LINE L1 -325 5796 5535 1835 138 33 16 chr20 48423469 48423774 -23730108 - AluSx SINE Alu -2 310 1 23 0 0 0 chr20 48424117 48424140 -23729742 + AT_rich Low_complexity Low_complexity 1 23 0 243 248 0 40 chr20 48424263 48424388 -23729494 + CT-rich Low_complexity Low_complexity 1 120 0 751 35 0 0 chr20 48424618 48424704 -23729178 + L1PA7 LINE L1 6061 6146 -8 225 350 0 0 chr20 48425669 48425772 -23728110 + MER117 DNA MER1_type 4 106 -91 1495 284 34 14 chr20 48426087 48426502 -23727380 + MLT1G1 LTR MaLR 3 425 -170 183 348 45 11 chr20 48427123 48427212 -23726670 + L3 LINE CR1 1005 1096 -481 426 35 126 0 chr20 48427791 48427934 -23725948 + (TA)n Simple_repeat Simple_repeat 2 162 0 496 123 30 30 chr20 48427937 48428243 -23725639 + (TATAA)n Simple_repeat Simple_repeat 1 306 0 21 0 0 0 chr20 48428246 48428267 -23725615 + AT_rich Low_complexity Low_complexity 1 21 0 6232 260 62 22 chr20 48428331 48431335 -23722547 - L1MEc LINE L1 -1511 4704 1624 302 359 8 0 chr20 48431471 48431599 -23722283 - L2 LINE L2 -655 2659 2531 233 259 47 0 chr20 48433242 48433327 -23720555 + MIR SINE MIR 64 152 -110 264 347 0 10 chr20 48433422 48433520 -23720362 - Charlie8 DNA MER1_type -2136 281 185 1216 58 7 0 chr20 48433537 48433692 -23720190 - L1PA7 LINE L1 0 6154 5999 3642 78 4 0 chr20 48433539 48433999 -23719883 - L1PA7 LINE L1 -2 6152 5691 921 86 0 0 chr20 48434066 48434182 -23719700 - L1PA7 LINE L1 0 6154 6039 227 254 0 0 chr20 48434377 48434432 -23719450 + CT-rich Low_complexity Low_complexity 1 55 0 22 56 0 0 chr20 48434670 48434706 -23719176 + AT_rich Low_complexity Low_complexity 1 36 0 416 248 131 13 chr20 48435085 48435238 -23718644 - MER117 DNA MER1_type -20 177 7 1739 228 20 22 chr20 48435238 48435689 -23718193 + L1MB7 LINE L1 5726 6175 -9 365 300 47 13 chr20 48435746 48435896 -23717986 + MIR3 SINE MIR 35 189 -19 363 335 126 5 chr20 48436344 48436559 -23717323 + MIR SINE MIR 16 256 -6 223 348 43 0 chr20 48437746 48437861 -23716021 - L2 LINE L2 -4 3309 3190 225 308 42 17 chr20 48437927 48438047 -23715835 - MIR SINE MIR -109 153 31 582 328 26 22 chr20 48438270 48438499 -23715383 + MIR SINE MIR 33 262 0 253 268 24 0 chr20 48439606 48439690 -23714192 + MIR SINE MIR 82 145 -63 542 287 133 5 chr20 48439730 48439925 -23713957 - MIR SINE MIR -40 222 3 199 318 141 0 chr20 48440017 48440102 -23713780 + L2 LINE L2 3136 3232 -40 716 303 39 8 chr20 48442926 48443180 -23710702 - MIR SINE MIR 0 262 1 1019 231 23 14 chr20 48443198 48443419 -23710463 - MER58A DNA MER1_type -1 223 1 432 245 148 6 chr20 48443453 48443649 -23710233 - MIR SINE MIR -5 257 37 1086 256 53 43 chr20 48444325 48444724 -23709158 + L2 LINE L2 2911 3313 0 320 338 12 0 chr20 48444766 48444846 -23709036 + L2 LINE L2 3137 3217 -55 185 0 40 0 chr20 48444876 48444901 -23708981 + (CAA)n Simple_repeat Simple_repeat 2 27 0 2198 106 0 31 chr20 48445048 48445369 -23708513 - AluSx SINE Alu 0 312 2 196 345 24 0 chr20 48445402 48445486 -23708396 + L2 LINE L2 3227 3312 -1 2011 127 3 17 chr20 48445924 48446223 -23707659 + AluSx SINE Alu 9 303 -9 260 344 56 0 chr20 48446483 48446608 -23707274 - MIR SINE MIR -40 222 91 219 114 0 0 chr20 48446775 48446810 -23707072 + (A)n Simple_repeat Simple_repeat 1 35 0 195 276 294 18 chr20 48447986 48448156 -23705726 + MIR SINE MIR 40 256 -6 2329 84 0 13 chr20 48448706 48449004 -23704878 - AluSc SINE Alu -15 294 1 191 35 0 35 chr20 48450658 48450687 -23703195 + (TTTC)n Simple_repeat Simple_repeat 2 29 0 211 183 17 33 chr20 48451346 48451406 -23702476 + (CA)n Simple_repeat Simple_repeat 1 59 0 183 235 0 0 chr20 48451445 48451496 -23702386 + (CA)n Simple_repeat Simple_repeat 2 52 0 3695 53 2 7 chr20 48451709 48452159 -23701723 - LTR7 LTR ERV1 -2 448 1 2546 87 45 13 chr20 48452159 48452539 -23701343 - HERVH LTR ERV1 0 7713 7322 1425 115 23 9 chr20 48452537 48452754 -23701128 - HERVH LTR ERV1 -1894 5819 5600 * 4371 149 0 3 chr20 48452755 48453419 -23700463 - HERVH LTR ERV1 -2564 5149 4488 3023 110 84 2 chr20 48453421 48453885 -23699997 - HERVH LTR ERV1 -3720 3993 3492 920 135 20 0 chr20 48453875 48454023 -23699859 - HERVH LTR ERV1 -4423 3290 3140 * 20316 99 21 8 chr20 48454017 48456965 -23696917 - HERVH LTR ERV1 -4726 2987 1 3565 69 2 7 chr20 48456967 48457417 -23696465 - LTR7 LTR ERV1 -2 448 1 520 301 70 53 chr20 48457714 48458013 -23695869 + L2 LINE L2 3008 3311 -2 1742 238 47 31 chr20 48458106 48458556 -23695326 + LTR16A1 LTR ERVL 1 457 0 2297 104 0 0 chr20 48458590 48458889 -23694993 - AluSx SINE Alu -11 301 3 530 207 0 167 chr20 48458901 48459099 -23694783 + MER63A DNA MER1_type 27 191 -19 537 239 130 11 chr20 48459188 48459372 -23694510 - MIR SINE MIR -28 234 29 193 244 76 50 chr20 48459536 48459655 -23694227 - MIR SINE MIR -121 141 20 377 314 83 18 chr20 48460372 48460541 -23693341 + MIR SINE MIR 23 202 -60 228 263 70 13 chr20 48461544 48461650 -23692232 - MIR SINE MIR -64 144 38 217 319 14 14 chr20 48461698 48461770 -23692112 - L2 LINE L2 -59 3213 3142 310 102 20 0 chr20 48462418 48462467 -23691415 + L1ME3A LINE L1 6027 6076 -94 202 288 25 25 chr20 48463935 48464015 -23689867 + MIR SINE MIR 81 160 -102 224 321 119 28 chr20 48464681 48464790 -23689092 + L2 LINE L2 3153 3271 -1 32 0 0 0 chr20 48464820 48464852 -23689030 + AT_rich Low_complexity Low_complexity 1 32 0 3461 136 136 25 chr20 48464957 48465302 -23688580 - Tigger3(Golem) DNA MER2_type 0 3029 2724 203 61 30 0 chr20 48465302 48465335 -23688547 + (TGAG)n Simple_repeat Simple_repeat 1 34 0 3461 136 136 25 chr20 48465335 48465601 -23688281 - Tigger3(Golem) DNA MER2_type -305 2724 2332 2328 105 0 7 chr20 48465601 48465907 -23687975 + AluSg SINE Alu 1 304 -6 3461 136 136 25 chr20 48465907 48465977 -23687905 - Tigger3(Golem) DNA MER2_type -697 2332 2271 545 171 0 0 chr20 48465993 48466075 -23687807 - Tigger3(Golem) DNA MER2_type -2947 82 1 264 111 0 0 chr20 48466094 48466139 -23687743 + (CA)n Simple_repeat Simple_repeat 2 46 0 1501 185 8 20 chr20 48466175 48466534 -23687348 - MER34 LTR ERV1 0 542 139 2424 84 3 25 chr20 48466534 48466854 -23687028 - AluSp SINE Alu 0 313 1 1501 185 8 20 chr20 48466854 48466992 -23686890 - MER34 LTR ERV1 -403 139 1 227 224 20 0 chr20 48466993 48467042 -23686840 + (TATATG)n Simple_repeat Simple_repeat 3 52 0 372 269 85 80 chr20 48467148 48467360 -23686522 - MIR SINE MIR -45 217 5 220 213 0 21 chr20 48467481 48467528 -23686354 + (TGAA)n Simple_repeat Simple_repeat 1 46 0 407 274 110 7 chr20 48468302 48468448 -23685434 + MIR SINE MIR 92 252 -10 25 65 0 0 chr20 48469014 48469060 -23684822 + AT_rich Low_complexity Low_complexity 1 46 0 237 308 62 0 chr20 48469731 48469796 -23684086 + L2 LINE L2 3202 3270 -2 1717 262 70 64 chr20 48469916 48470576 -23683306 - L1ME3A LINE L1 -5 6165 5502 183 156 0 0 chr20 48471019 48471051 -23682831 + T-rich Low_complexity Low_complexity 1 32 0 202 283 17 0 chr20 48471401 48471461 -23682421 + L2 LINE L2 3242 3302 -11 237 65 0 0 chr20 48471462 48471493 -23682389 + (TGAA)n Simple_repeat Simple_repeat 4 34 0 426 283 130 11 chr20 48471708 48471885 -23681997 - MIR SINE MIR -28 234 37 423 0 0 0 chr20 48472431 48472478 -23681404 + (CA)n Simple_repeat Simple_repeat 1 47 0 2652 97 21 19 chr20 48473250 48473623 -23680259 - THE1C LTR MaLR 0 375 2 317 349 68 5 chr20 48473691 48473883 -23679999 - L1M4 LINE L1 -1913 4233 4030 22 80 0 0 chr20 48473951 48474001 -23679881 + AT_rich Low_complexity Low_complexity 1 50 0 313 303 43 25 chr20 48474322 48474484 -23679398 + L1ME4a LINE L1 5494 5658 -463 319 236 139 42 chr20 48474500 48474644 -23679238 + L1ME4a LINE L1 5709 5866 -255 531 209 130 28 chr20 48474833 48475010 -23678872 + LTR41 LTR ERVL 1 195 -578 847 206 25 84 chr20 48475141 48475427 -23678455 + LTR41 LTR ERVL 495 763 -10 21 36 0 0 chr20 48475757 48475785 -23678097 + AT_rich Low_complexity Low_complexity 1 28 0 25 0 0 0 chr20 48476239 48476264 -23677618 + AT_rich Low_complexity Low_complexity 1 25 0 1302 69 29 6 chr20 48476264 48476437 -23677445 - L1MA1 LINE L1 -7 6295 6119 323 347 66 6 chr20 48476554 48476721 -23677161 - MIR SINE MIR -54 208 32 367 349 8 0 chr20 48477216 48477345 -23676537 + MIR3 SINE MIR 52 181 -27 326 191 16 0 chr20 48477423 48477486 -23676396 + MER97b DNA MER1_type? 46 109 -944 2656 23 7 7 chr20 48477959 48478269 -23675613 + AluY SINE Alu 1 310 -1 241 222 83 65 chr20 48478362 48478470 -23675412 + MIR SINE MIR 132 241 -21 1221 234 23 75 chr20 48481105 48481490 -23672392 + MLT1A1 LTR MaLR 1 365 0 554 287 63 30 chr20 48485261 48485561 -23668321 - LTR16C LTR ERVL 0 491 182 866 19 9 0 chr20 48485598 48485706 -23668176 + (TCTA)n Simple_repeat Simple_repeat 1 109 0 195 100 0 0 chr20 48485742 48485772 -23668110 + (GA)n Simple_repeat Simple_repeat 1 30 0 218 211 19 0 chr20 48486040 48486092 -23667790 + (TATG)n Simple_repeat Simple_repeat 2 54 0 252 246 0 0 chr20 48486117 48486186 -23667696 - L1MC/D LINE L1 -1972 5836 5768 202 194 32 32 chr20 48486193 48486286 -23667596 + (TATAA)n Simple_repeat Simple_repeat 2 94 0 343 323 97 40 chr20 48486313 48486539 -23667343 + MIR SINE MIR 10 248 -14 362 320 41 0 chr20 48486820 48486942 -23666940 + MLT1H1 LTR MaLR 37 163 -392 1977 130 48 0 chr20 48486948 48487240 -23666642 + AluSc SINE Alu 1 306 -3 717 181 0 0 chr20 48487240 48487378 -23666504 + GA-rich Low_complexity Low_complexity 1 138 0 342 235 75 84 chr20 48487396 48487609 -23666273 + MLT1H1 LTR MaLR 185 395 -195 2719 250 74 55 chr20 48487737 48488312 -23665570 - Charlie7 DNA MER1_type -423 2189 1626 2280 89 0 3 chr20 48488312 48488603 -23665279 - AluSg SINE Alu -20 290 1 2719 250 74 55 chr20 48488603 48489491 -23664391 - Charlie7 DNA MER1_type -986 1626 699 1654 132 106 7 chr20 48489919 48490192 -23663690 + AluSx SINE Alu 1 300 -12 291 248 32 0 chr20 48492420 48492545 -23661337 + (TA)n Simple_repeat Simple_repeat 2 130 0 190 364 40 0 chr20 48492874 48492973 -23660909 + MIR SINE MIR 81 183 -79 369 261 28 21 chr20 48493326 48493468 -23660414 + LTR16C LTR ERVL 349 491 0 526 341 22 0 chr20 48493492 48493671 -23660211 + MIR SINE MIR 31 213 -49 337 342 20 13 chr20 48494259 48494411 -23659471 - L2 LINE L2 0 3313 3161 409 324 131 9 chr20 48495061 48495382 -23658500 + MLT1L LTR MaLR 168 527 -88 1009 108 12 6 chr20 48495503 48495670 -23658212 + (TTCC)n Simple_repeat Simple_repeat 4 171 0 525 294 118 0 chr20 48495916 48496103 -23657779 + MIR SINE MIR 34 242 -20 262 200 29 19 chr20 48496432 48496537 -23657345 + (TA)n Simple_repeat Simple_repeat 1 106 0 198 103 0 0 chr20 48496548 48496577 -23657305 + (TG)n Simple_repeat Simple_repeat 2 30 0 484 349 5 16 chr20 48497026 48497218 -23656664 + MIR SINE MIR 2 191 -71 580 301 25 0 chr20 48497268 48497431 -23656451 - MIR SINE MIR -90 172 6 180 245 94 0 chr20 48498570 48498623 -23655259 - MIR3 SINE MIR -36 172 115 1114 237 0 0 chr20 48498650 48498865 -23655017 - MER58A DNA MER1_type -1 223 9 237 255 28 19 chr20 48498910 48499016 -23654866 + (TATAA)n Simple_repeat Simple_repeat 1 107 0 1043 217 9 5 chr20 48500713 48500930 -23652952 - MER20 DNA MER1_type -1 218 1 183 188 0 0 chr20 48501845 48501877 -23652005 + L2 LINE L2 3263 3294 -19 842 312 34 0 chr20 48501933 48502170 -23651712 - MIR SINE MIR 0 262 18 233 303 83 18 chr20 48503106 48503215 -23650667 + L2 LINE L2 3197 3312 -1 635 270 177 55 chr20 48503268 48503855 -23650027 + L2 LINE L2 2677 3313 0 259 200 0 0 chr20 48504148 48504193 -23649689 + MIR SINE MIR 218 262 0 205 310 0 0 chr20 48505603 48505661 -23648221 + L2 LINE L2 3196 3253 -19 975 195 4 61 chr20 48506536 48506767 -23647115 - MER20 DNA MER1_type 0 219 2 594 302 50 18 chr20 48507191 48507454 -23646428 - MIR SINE MIR 0 262 6 272 27 27 0 chr20 48508254 48508291 -23645591 + (TAA)n Simple_repeat Simple_repeat 2 39 0 785 277 36 5 chr20 48508846 48509070 -23644812 + MIR SINE MIR 12 242 -20 23 0 0 0 chr20 48509431 48509454 -23644428 + AT_rich Low_complexity Low_complexity 1 23 0 576 252 200 68 chr20 48510496 48510952 -23642930 - MLT1H LTR MaLR -32 517 2 383 328 113 36 chr20 48511169 48511529 -23642353 - L2 LINE L2 -160 3112 2723 570 295 38 19 chr20 48511820 48512030 -23641852 + MIR SINE MIR 13 226 -36 540 142 41 53 chr20 48512296 48512465 -23641417 - Charlie5 DNA MER1_type -64 2548 2382 479 322 139 53 chr20 48512484 48512837 -23641045 - L1MEd LINE L1 -2742 3387 3066 1913 128 10 24 chr20 48512837 48513133 -23640749 - AluSx SINE Alu 0 312 21 479 322 139 53 chr20 48513133 48513456 -23640426 - L1MEd LINE L1 -3063 3066 2653 456 288 63 49 chr20 48513442 48513727 -23640155 - L1MEd LINE L1 -5091 1028 740 * 265 324 19 0 chr20 48514347 48514455 -23639427 + HAL1b LINE L1 406 515 -833 1404 226 20 31 chr20 48514455 48514845 -23639037 - MER63B DNA MER1_type -44 392 7 236 310 35 0 chr20 48514874 48514987 -23638895 + HAL1b LINE L1 531 647 -701 418 224 120 49 chr20 48515288 48515471 -23638411 + L1M4 LINE L1 4027 4222 -1924 41 21 0 0 chr20 48515540 48515588 -23638294 + AT_rich Low_complexity Low_complexity 1 48 0 490 328 25 25 chr20 48516008 48516334 -23637548 - HAL1b LINE L1 -708 640 315 4117 195 17 13 chr20 48516353 48517788 -23636094 - L1PB4 LINE L1 -2 6154 4721 21 36 0 0 chr20 48517833 48517861 -23636021 + AT_rich Low_complexity Low_complexity 1 28 0 430 241 85 124 chr20 48517886 48518324 -23635558 - HAL1b LINE L1 -1112 1311 13 1883 197 0 8 chr20 48518925 48519276 -23634606 - MER7A DNA MER2_type 0 346 1 36 77 0 0 chr20 48519383 48519461 -23634421 + AT_rich Low_complexity Low_complexity 1 78 0 405 330 23 60 chr20 48520447 48520662 -23633220 + L3 LINE CR1 1170 1376 -201 287 398 16 8 chr20 48521700 48521823 -23632059 + L2 LINE L2 3148 3271 -1 183 340 113 28 chr20 48522232 48522373 -23631509 + MIR SINE MIR 33 185 -77 231 167 0 0 chr20 48523110 48523152 -23630730 + A-rich Low_complexity Low_complexity 1 42 0 183 222 0 0 chr20 48523220 48523265 -23630617 + CT-rich Low_complexity Low_complexity 3 47 0 382 194 10 10 chr20 48523441 48523539 -23630343 + CT-rich Low_complexity Low_complexity 6 103 0 2165 111 4 0 chr20 48523539 48523818 -23630064 - AluSx SINE Alu -32 280 1 649 276 143 19 chr20 48524232 48524595 -23629287 - MLT1I LTR MaLR 0 409 2 738 325 65 14 chr20 48524596 48525106 -23628776 + L1M4 LINE L1 4829 5364 -782 21 57 0 0 chr20 48525531 48525566 -23628316 + AT_rich Low_complexity Low_complexity 1 35 0 234 259 71 12 chr20 48525958 48526043 -23627839 - MLT1L LTR MaLR -378 237 148 435 312 83 29 chr20 48526126 48526331 -23627551 - MIR SINE MIR 0 262 47 22 35 0 0 chr20 48526808 48526837 -23627045 + AT_rich Low_complexity Low_complexity 1 29 0 2082 117 40 0 chr20 48527875 48528175 -23625707 - AluSx SINE Alu 0 312 1 206 354 131 15 chr20 48530309 48530439 -23623443 + MIR3 SINE MIR 10 154 -54 241 100 40 0 chr20 48530881 48530931 -23622951 + (TA)n Simple_repeat Simple_repeat 1 52 0 469 338 7 0 chr20 48530996 48531147 -23622735 + L2 LINE L2 3161 3312 -1 650 201 71 80 chr20 48531385 48531431 -23622451 - L1 LINE L1 -2222 3924 3879 2262 104 0 3 chr20 48531431 48531730 -23622152 - AluSx SINE Alu -14 298 1 650 201 71 80 chr20 48531730 48531908 -23621974 - L1 LINE L1 -2267 3879 3702 277 188 50 0 chr20 48531971 48532051 -23621831 + (TA)n Simple_repeat Simple_repeat 1 84 0 268 156 16 0 chr20 48532056 48532120 -23621762 + L1MA9 LINE L1 6218 6282 -30 219 302 125 0 chr20 48532343 48532439 -23621443 - L2 LINE L2 -7 3306 3199 427 197 125 82 chr20 48532440 48532648 -23621234 + MER112 DNA MER1_type 2 218 -42 268 356 10 0 chr20 48532870 48532971 -23620911 - MER5A DNA MER1_type -84 105 4 2469 58 3 0 chr20 48533128 48533464 -23620418 + AluY SINE Alu 1 337 0 1547 184 38 53 chr20 48534847 48535319 -23618563 + LTR55 LTR ERV 82 546 -2 221 281 21 42 chr20 48535319 48535415 -23618467 - MER5A DNA MER1_type -66 123 30 188 303 67 22 chr20 48535466 48535555 -23618327 + MIR SINE MIR 38 130 -78 236 30 30 0 chr20 48536338 48536371 -23617511 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2215 132 0 0 chr20 48537078 48537388 -23616494 - AluSx SINE Alu -1 311 2 217 250 83 14 chr20 48537392 48537464 -23616418 + MIR SINE MIR 84 160 -102 2411 241 104 33 chr20 48537476 48538404 -23615478 + L1ME1 LINE L1 46 1039 -5357 236 128 0 0 chr20 48538483 48538530 -23615352 - LTR66 LTR ERVL -170 440 394 3730 251 38 39 chr20 48538536 48540470 -23613412 + L1ME1 LINE L1 1906 3811 -2404 506 234 96 0 chr20 48540475 48540714 -23613168 + L1ME1 LINE L1 4246 4507 -1708 1681 249 16 10 chr20 48540719 48541225 -23612657 + L1ME1 LINE L1 4582 5090 -1125 1306 125 39 4 chr20 48541225 48541457 -23612425 + MSTA LTR MaLR 1 240 -188 1382 250 47 19 chr20 48541481 48541949 -23611933 + L1ME1 LINE L1 5562 6042 -193 280 336 75 22 chr20 48542017 48542151 -23611731 - MER5A DNA MER1_type -26 163 23 195 341 24 12 chr20 48543616 48543698 -23610184 - L2 LINE L2 -17 3255 3173 180 0 0 0 chr20 48543764 48543784 -23610098 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 23 0 0 0 chr20 48543837 48543860 -23610022 + AT_rich Low_complexity Low_complexity 1 23 0 567 307 64 23 chr20 48543896 48544114 -23609768 - MIR SINE MIR 0 262 36 213 329 12 12 chr20 48545142 48545227 -23608655 + L2 LINE L2 2448 2532 -782 503 104 0 0 chr20 48545294 48545371 -23608511 - L1PA5 LINE L1 -6 6148 6072 286 0 0 0 chr20 48545371 48545404 -23608478 + L1PA4 LINE L1 5850 5882 -273 192 304 38 38 chr20 48545520 48545599 -23608283 - L2 LINE L2 0 3272 3194 2326 89 3 9 chr20 48545668 48545983 -23607899 + AluSp SINE Alu 1 313 0 401 343 132 5 chr20 48546384 48546603 -23607279 + MIR SINE MIR 3 249 -13 361 311 8 38 chr20 48546685 48546817 -23607065 + L2 LINE L2 3136 3263 -9 230 184 0 0 chr20 48546898 48546936 -23606946 + MIR SINE MIR 195 232 -30 2619 175 47 13 chr20 48547789 48548320 -23605562 - L1PB4 LINE L1 -2 6154 5606 276 30 0 0 chr20 48548467 48548500 -23605382 + (CA)n Simple_repeat Simple_repeat 1 33 0 1888 168 0 3 chr20 48548560 48548857 -23605025 - AluSx SINE Alu -16 296 1 286 279 63 0 chr20 48549049 48549128 -23604754 + MIR SINE MIR 157 240 -22 426 353 16 27 chr20 48552814 48553001 -23600881 - MER5A DNA MER1_type -1 188 4 224 169 28 56 chr20 48553157 48553228 -23600654 + A-rich Low_complexity Low_complexity 4 72 0 380 274 121 33 chr20 48553362 48553577 -23600305 + L1ME4a LINE L1 5608 5841 -280 2450 134 0 3 chr20 48553722 48554087 -23599795 + THE1B LTR MaLR 1 364 0 23 0 0 0 chr20 48554689 48554712 -23599170 + AT_rich Low_complexity Low_complexity 1 23 0 606 214 66 60 chr20 48555217 48555399 -23598483 - MER5A DNA MER1_type 0 189 7 872 193 6 34 chr20 48555401 48555577 -23598305 - MER5B DNA MER1_type -7 171 1 216 338 98 44 chr20 48555700 48555829 -23598053 - MIR SINE MIR -23 239 91 538 261 0 0 chr20 48555829 48555940 -23597942 + MER81 DNA DNA 2 112 -2 216 338 98 44 chr20 48555940 48556035 -23597847 - MIR SINE MIR -171 91 3 188 265 102 51 chr20 48556179 48556207 -23597675 + MER5B DNA MER1_type 74 99 -79 764 178 61 11 chr20 48556207 48556387 -23597495 + MER5A DNA MER1_type 1 189 0 188 265 102 51 chr20 48556387 48556456 -23597426 + MER5B DNA MER1_type 99 176 -2 636 256 88 0 chr20 48556473 48556633 -23597249 + MER5B DNA MER1_type 1 174 -4 1081 133 0 44 chr20 48557693 48557874 -23596008 + AluSg/x SINE Alu 133 305 -5 618 26 0 0 chr20 48558143 48558219 -23595663 + (TCTA)n Simple_repeat Simple_repeat 3 78 0 1161 209 60 76 chr20 48558259 48558627 -23595255 + MLT1B LTR MaLR 29 390 0 24 32 0 0 chr20 48558670 48558701 -23595181 + AT_rich Low_complexity Low_complexity 1 31 0 291 267 86 0 chr20 48559335 48559440 -23594442 + MIR SINE MIR 85 198 -64 1725 216 75 36 chr20 48560861 48561329 -23592553 + MLT1D LTR MaLR 20 505 0 378 0 0 0 chr20 48561965 48562007 -23591875 + (CA)n Simple_repeat Simple_repeat 2 43 0 232 301 102 58 chr20 48562374 48562580 -23591302 + L3 LINE CR1 1160 1374 -203 240 325 0 36 chr20 48562733 48562816 -23591066 + L3 LINE CR1 1425 1504 -73 285 336 45 0 chr20 48563091 48563225 -23590657 - MIR SINE MIR -48 214 75 444 67 0 0 chr20 48565170 48565230 -23588652 + (CA)n Simple_repeat Simple_repeat 1 60 0 24 0 0 0 chr20 48565369 48565393 -23588489 + AT_rich Low_complexity Low_complexity 1 24 0 180 0 0 0 chr20 48565551 48565571 -23588311 + (CA)n Simple_repeat Simple_repeat 1 20 0 402 238 55 30 chr20 48565588 48565752 -23588130 - L1MC4a LINE L1 -1911 5897 5730 23 33 0 0 chr20 48565785 48565815 -23588067 + AT_rich Low_complexity Low_complexity 1 30 0 341 307 11 26 chr20 48566379 48566568 -23587314 - L1ME4a LINE L1 -221 5900 5715 212 184 0 0 chr20 48566740 48566778 -23587104 + (TTA)n Simple_repeat Simple_repeat 2 39 0 1790 94 27 94 chr20 48567172 48567471 -23586411 + AluSx SINE Alu 1 279 -33 234 0 0 0 chr20 48567475 48567501 -23586381 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 252 363 20 10 chr20 48567568 48567670 -23586212 + MIR SINE MIR 11 113 -149 357 258 58 33 chr20 48567850 48567970 -23585912 + L2 LINE L2 3148 3270 -2 352 320 92 59 chr20 48568467 48569063 -23584819 - L2 LINE L2 -457 2857 2242 426 307 128 0 chr20 48569139 48569318 -23584564 + MIR SINE MIR 30 231 -31 321 336 150 14 chr20 48569745 48569965 -23583917 - MIR SINE MIR -1 261 12 488 285 24 73 chr20 48570536 48570870 -23583012 - L2 LINE L2 0 3313 2950 384 321 65 30 chr20 48571008 48571176 -23582706 - MIR SINE MIR -69 193 20 276 313 86 0 chr20 48571912 48572040 -23581842 + L2 LINE L2 2919 3057 -256 374 300 113 25 chr20 48572080 48572240 -23581642 - MIR SINE MIR -4 258 85 402 219 53 150 chr20 48572246 48572492 -23581390 + L2 LINE L2 3092 3313 0 324 274 32 21 chr20 48572553 48572648 -23581234 - MIR SINE MIR -91 171 76 2045 104 42 7 chr20 48572683 48572967 -23580915 + AluSq SINE Alu 5 299 -10 342 67 0 0 chr20 48572967 48573012 -23580870 + (TA)n Simple_repeat Simple_repeat 2 46 0 193 320 155 35 chr20 48573670 48574045 -23579837 + L2 LINE L2 2426 2845 -469 185 275 143 22 chr20 48574352 48574443 -23579439 + L2 LINE L2 3144 3245 -27 2252 90 7 0 chr20 48574518 48574846 -23579036 + AluSc SINE Alu 1 330 0 2078 145 0 0 chr20 48576179 48576488 -23577394 + AluSx SINE Alu 1 309 0 351 0 0 0 chr20 48577075 48577114 -23576768 + (TG)n Simple_repeat Simple_repeat 1 39 0 423 304 68 6 chr20 48577477 48577654 -23576228 + MIR SINE MIR 67 253 -9 11918 128 50 5 chr20 48578248 48578563 -23575319 + Tigger1 DNA MER2_type 1 300 -2118 288 0 0 0 chr20 48578563 48578595 -23575287 + (TC)n Simple_repeat Simple_repeat 1 32 0 11918 128 50 5 chr20 48578595 48580320 -23573562 + Tigger1 DNA MER2_type 300 2133 -285 467 16 0 16 chr20 48580320 48580381 -23573501 + (GGA)n Simple_repeat Simple_repeat 2 61 0 3425 159 9 30 chr20 48580381 48581073 -23572809 + L1MB2 LINE L1 5488 6164 -7 548 318 17 50 chr20 48582531 48582770 -23571112 + MIR SINE MIR 9 239 -23 522 319 24 40 chr20 48583231 48583482 -23570400 - MIR SINE MIR -3 259 13 313 333 72 61 chr20 48584811 48585349 -23568533 + L2 LINE L2 2297 2840 -474 210 204 41 0 chr20 48585425 48585474 -23568408 + CT-rich Low_complexity Low_complexity 2 52 0 224 316 49 126 chr20 48585506 48585753 -23568129 + L2 LINE L2 3033 3260 -12 32 57 0 0 chr20 48586331 48586384 -23567498 + AT_rich Low_complexity Low_complexity 1 53 0 1084 313 127 23 chr20 48586578 48587991 -23565891 + L1ME LINE L1 2111 3670 -2476 251 161 59 85 chr20 48588223 48588341 -23565541 + L1ME LINE L1 3877 3991 -2155 261 289 41 83 chr20 48588342 48588560 -23565322 - L1ME3A LINE L1 -7 6163 5955 880 254 63 48 chr20 48588619 48589016 -23564866 - L1MC5 LINE L1 -433 7528 7126 1025 295 81 29 chr20 48589145 48589871 -23564011 + L1ME LINE L1 4105 4868 -1278 552 219 53 130 chr20 48589931 48590232 -23563650 - MLT1I LTR MaLR 0 409 132 2366 39 54 0 chr20 48590409 48590689 -23563193 + AluY SINE Alu 1 295 -16 513 303 56 72 chr20 48590784 48591174 -23562708 + L1ME LINE L1 5259 5645 -524 234 0 0 0 chr20 48591566 48591592 -23562290 + (TA)n Simple_repeat Simple_repeat 1 26 0 * 333 0 0 0 chr20 48591591 48591628 -23562254 + (CA)n Simple_repeat Simple_repeat 2 38 0 25 75 0 0 chr20 48591809 48591862 -23562020 + AT_rich Low_complexity Low_complexity 1 53 0 240 226 32 0 chr20 48592053 48592115 -23561767 + MER117 DNA MER1_type 106 169 -28 23 0 0 0 chr20 48592630 48592653 -23561229 + AT_rich Low_complexity Low_complexity 1 23 0 252 332 27 28 chr20 48594147 48594317 -23559565 + MER5A DNA MER1_type 1 180 -9 215 279 128 0 chr20 48595425 48595511 -23558371 - MIR SINE MIR -17 245 149 183 156 0 0 chr20 48595837 48595869 -23558013 - MIR SINE MIR -147 115 84 2218 202 85 15 chr20 48596232 48596702 -23557180 - MLT1D LTR MaLR -1 504 2 356 206 43 114 chr20 48596867 48597051 -23556831 - MER69A DNA AcHobo -6 171 1 2101 111 20 7 chr20 48597487 48597785 -23556097 - AluSx SINE Alu -10 302 1 796 198 108 33 chr20 48598124 48598336 -23555546 - MER33 DNA MER1_type -96 228 1 747 234 31 22 chr20 48598463 48598689 -23555193 - L1MC5 LINE L1 -722 7239 7012 574 258 99 9 chr20 48599487 48599700 -23554182 + MIR SINE MIR 10 241 -21 974 144 7 7 chr20 48599846 48599999 -23553883 + L1PA14 LINE L1 6000 6152 -9 21 71 0 0 chr20 48600005 48600047 -23553835 + AT_rich Low_complexity Low_complexity 1 42 0 450 378 73 3 chr20 48602538 48602824 -23551058 - L2 LINE L2 -455 2859 2554 207 0 0 0 chr20 48602840 48602863 -23551019 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 1911 147 4 0 chr20 48602863 48603142 -23550740 - AluSx SINE Alu -32 280 1 858 311 84 25 chr20 48603275 48603720 -23550162 - L2 LINE L2 -34 3279 2802 648 348 65 21 chr20 48604226 48604608 -23549274 - LTR16A LTR ERVL -22 428 30 237 331 118 22 chr20 48606284 48606420 -23547462 + MIR3 SINE MIR 57 205 -3 333 265 118 76 chr20 48606461 48606699 -23547183 + MIR SINE MIR 11 258 -4 243 103 0 0 chr20 48606774 48606813 -23547069 + (TC)n Simple_repeat Simple_repeat 2 40 0 207 217 17 17 chr20 48606982 48607042 -23546840 + (TAGA)n Simple_repeat Simple_repeat 2 61 0 462 299 81 10 chr20 48608775 48608972 -23544910 + MIR SINE MIR 45 255 -7 1038 231 19 40 chr20 48609363 48609688 -23544194 - HsTC2 DNA Tc2 -122 1776 1283 193 276 69 0 chr20 48610473 48610531 -23543351 - MIR SINE MIR -28 234 173 330 255 163 0 chr20 48612427 48612525 -23541357 + MIR SINE MIR 62 175 -87 321 68 0 0 chr20 48612573 48612617 -23541265 + (CA)n Simple_repeat Simple_repeat 1 44 0 446 51 0 17 chr20 48612765 48612824 -23541058 - L1PA5 LINE L1 -4 6150 6093 186 150 0 0 chr20 48612956 48612996 -23540886 + (TG)n Simple_repeat Simple_repeat 2 41 0 857 187 148 24 chr20 48616355 48616564 -23537318 - MER96B DNA MER1_type? -182 235 1 274 323 39 15 chr20 48616564 48616694 -23537188 + MIR SINE MIR 111 243 -19 1827 136 10 52 chr20 48617745 48618054 -23535828 - AluSx SINE Alu -16 296 1 190 319 0 0 chr20 48619119 48619166 -23534716 - L3 LINE CR1 -106 1471 1425 331 348 37 31 chr20 48619381 48619542 -23534340 - MIR SINE MIR -82 180 19 270 353 10 10 chr20 48619952 48620054 -23533828 - MER5A DNA MER1_type -87 102 1 2215 108 3 7 chr20 48620105 48620411 -23533471 - AluSc SINE Alu -4 305 1 282 327 0 64 chr20 48621178 48621334 -23532548 - L3 LINE CR1 -1108 469 324 2317 100 0 3 chr20 48621384 48621683 -23532199 - AluSx SINE Alu -14 298 1 421 333 20 7 chr20 48623097 48623250 -23530632 - MER5A DNA MER1_type 0 189 35 658 291 90 0 chr20 48623389 48623623 -23530259 - MIR SINE MIR 0 262 8 396 277 0 11 chr20 48623629 48623723 -23530159 + Cheshire DNA MER1_type 1 93 -2327 254 255 0 0 chr20 48623737 48623788 -23530094 + Cheshire DNA MER1_type 843 893 -1527 246 216 14 108 chr20 48623790 48623823 -23530059 + Cheshire DNA MER1_type 2354 2378 -42 1189 166 83 9 chr20 48623823 48624040 -23529842 + MER46A DNA MER2_type 1 233 -3 246 216 14 108 chr20 48624040 48624080 -23529802 + Cheshire DNA MER1_type 2378 2420 0 345 216 138 35 chr20 48624488 48624604 -23529278 - MIR SINE MIR -125 137 10 274 305 9 9 chr20 48624617 48624722 -23529160 - MIR SINE MIR -79 183 79 688 318 15 0 chr20 48624987 48625185 -23528697 + MIR SINE MIR 62 262 0 429 270 127 34 chr20 48625236 48625473 -23528409 - MIR SINE MIR 0 262 4 297 358 8 33 chr20 48626667 48626787 -23527095 + L2 LINE L2 2930 3046 -226 216 297 0 71 chr20 48627170 48627249 -23526633 - MIR SINE MIR -97 111 38 1060 144 149 0 chr20 48627257 48627458 -23526424 + MSTA LTR MaLR 1 231 -197 2764 107 46 9 chr20 48627462 48627894 -23525988 - LTR7 LTR ERV1 -2 448 1 2575 77 48 3 chr20 48627894 48628269 -23525613 - HERVH LTR ERV1 0 7713 7322 1313 126 37 9 chr20 48628267 48628481 -23525401 - HERVH LTR ERV1 -1894 5819 5600 * 2958 135 23 23 chr20 48628482 48629099 -23524783 - HERVH LTR ERV1 -2564 5149 4488 3488 93 6 10 chr20 48629101 48629597 -23524285 - HERVH LTR ERV1 -3720 3993 3500 827 157 27 0 chr20 48629596 48629743 -23524139 - HERVH LTR ERV1 -4423 3290 3140 * 19373 97 49 12 chr20 48629737 48631816 -23522066 - HERVH LTR ERV1 -4726 2987 772 2519 68 0 0 chr20 48631816 48632124 -23521758 + AluY SINE Alu 1 308 -3 19373 97 49 12 chr20 48632124 48632926 -23520956 - HERVH LTR ERV1 -6941 772 1 2772 104 58 21 chr20 48632928 48633360 -23520522 - LTR7 LTR ERV1 -2 448 1 1051 160 105 0 chr20 48633360 48633541 -23520341 + MSTA LTR MaLR 229 428 0 9217 171 23 43 chr20 48633541 48633848 -23520034 + MSTA-int LTR MaLR 1 312 -1339 1545 191 14 0 chr20 48633848 48634125 -23519757 - AluJb SINE Alu -1 311 31 9217 171 23 43 chr20 48634125 48635501 -23518381 + MSTA-int LTR MaLR 312 1651 0 2155 159 113 13 chr20 48635501 48635890 -23517992 + MSTA LTR MaLR 1 428 0 602 296 68 0 chr20 48636517 48636693 -23517189 - MER5A DNA MER1_type -1 188 1 745 247 11 11 chr20 48636696 48636874 -23517008 + MER5B DNA MER1_type 1 178 0 231 173 0 0 chr20 48636893 48636945 -23516937 + (TG)n Simple_repeat Simple_repeat 2 53 0 190 436 17 0 chr20 48637152 48637269 -23516613 - L2 LINE L2 -268 3045 2927 202 344 31 0 chr20 48637291 48637355 -23516527 - MIR SINE MIR -163 99 34 461 281 126 9 chr20 48637899 48638130 -23515752 + L1ME LINE L1 5531 5788 -333 293 240 13 0 chr20 48639460 48639535 -23514347 - L1MB7 LINE L1 -10 6174 6099 1347 202 32 8 chr20 48640351 48640603 -23513279 + AluJo SINE Alu 33 290 -22 308 275 28 115 chr20 48641058 48641240 -23512642 - HAL1b LINE L1 -450 898 733 208 197 15 15 chr20 48641532 48641598 -23512284 + CT-rich Low_complexity Low_complexity 2 67 0 2224 88 0 3 chr20 48641637 48641922 -23511960 - AluY SINE Alu -27 284 1 2170 107 0 0 chr20 48641927 48642237 -23511645 - AluSx SINE Alu 0 310 1 716 238 0 64 chr20 48642549 48642751 -23511131 - MER5A DNA MER1_type 0 189 1 246 234 0 16 chr20 48643315 48643379 -23510503 - HAL1 LINE L1 -864 1643 1581 1639 228 82 53 chr20 48643688 48644408 -23509474 - MER21B LTR ERV1 -69 794 19 2001 210 58 29 chr20 48644557 48645038 -23508844 + LTR31 LTR ERV1 116 610 -9 299 232 14 0 chr20 48645051 48645120 -23508762 - MER21B LTR ERV1 -789 74 5 190 202 39 10 chr20 48645124 48645228 -23508654 + (TA)n Simple_repeat Simple_repeat 2 108 0 257 308 26 0 chr20 48645250 48645328 -23508554 + ORSL DNA AcHobo 195 274 -1 518 318 28 8 chr20 48645329 48645584 -23508298 - HAL1 LINE L1 -979 1528 1269 255 377 101 0 chr20 48646790 48646928 -23506954 + MIR SINE MIR 2 153 -109 456 262 110 62 chr20 48646940 48648042 -23505840 + L1ME1 LINE L1 998 2332 -4413 1526 233 112 7 chr20 48648044 48649010 -23504872 + L1ME1 LINE L1 5459 6576 -8 704 219 17 11 chr20 48649036 48649214 -23504668 - L1M4 LINE L1 -3294 2852 2674 366 340 12 31 chr20 48649675 48649837 -23504045 + MIR SINE MIR 42 200 -62 750 266 79 9 chr20 48650679 48650893 -23502989 + MIR SINE MIR 13 241 -21 351 322 13 25 chr20 48650949 48651070 -23502812 - MIR SINE MIR -70 138 30 281 208 0 0 chr20 48652220 48652268 -23501614 + MER94 DNA DNA 1 48 -86 1048 238 66 25 chr20 48653218 48653525 -23500357 - L1M4 LINE L1 -3321 2825 2519 19570 170 28 19 chr20 48653525 48655313 -23498569 - L1MA2 LINE L1 0 7723 5953 1834 156 14 3 chr20 48655313 48655601 -23498281 + AluJb SINE Alu 1 291 -21 19570 170 28 19 chr20 48655601 48655692 -23498190 - L1MA2 LINE L1 -1770 5953 5864 2043 146 0 0 chr20 48655692 48655987 -23497895 - AluSq SINE Alu -18 295 1 19570 170 28 19 chr20 48655987 48658604 -23495278 - L1MA2 LINE L1 -1859 5864 3272 2100 110 3 11 chr20 48658604 48658886 -23494996 - AluSg SINE Alu -30 280 1 19570 170 28 19 chr20 48658886 48662025 -23491857 - L1MA2 LINE L1 -4451 3272 13 531 321 124 4 chr20 48662127 48662401 -23491481 + MLT1K LTR MaLR 255 561 -27 24 53 0 0 chr20 48662630 48662668 -23491214 + AT_rich Low_complexity Low_complexity 1 38 0 375 157 36 0 chr20 48662668 48662751 -23491131 - L1MB3 LINE L1 -3 6180 6095 1596 181 3 31 chr20 48662780 48663068 -23490814 + AluJb SINE Alu 1 280 -32 248 53 26 0 chr20 48663070 48663108 -23490774 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 439 258 49 82 chr20 48663263 48663530 -23490352 - L1MC4 LINE L1 -2 8040 7783 277 149 0 0 chr20 48663542 48663589 -23490293 + U5 snRNA snRNA 1 47 -69 667 32 21 11 chr20 48663755 48663849 -23490033 + (TCTA)n Simple_repeat Simple_repeat 4 98 0 498 232 53 13 chr20 48664051 48664202 -23489680 - L1ME LINE L1 -5178 892 736 1593 180 68 17 chr20 48664245 48664600 -23489282 - THE1C LTR MaLR 0 375 3 9198 147 5 52 chr20 48664602 48665721 -23488161 - THE1B-int LTR MaLR 0 1580 410 2121 135 48 25 chr20 48665721 48666077 -23487805 - THE1B LTR MaLR 0 364 1 9198 147 5 52 chr20 48666077 48666211 -23487671 - THE1B-int LTR MaLR -1170 410 271 2136 136 10 0 chr20 48666211 48666520 -23487362 - AluSq SINE Alu -1 312 1 9198 147 5 52 chr20 48666520 48666921 -23486961 - THE1B-int LTR MaLR -1309 271 3 1888 129 73 20 chr20 48666923 48667279 -23486603 - THE1C LTR MaLR 0 375 1 563 253 13 133 chr20 48667288 48667543 -23486339 - L1ME LINE L1 -5772 298 83 1756 140 36 70 chr20 48667543 48667929 -23485953 + THE1C LTR MaLR 3 375 0 563 253 13 133 chr20 48667929 48667973 -23485909 - L1ME LINE L1 -5987 83 35 347 296 90 16 chr20 48668427 48668616 -23485266 - L1M4 LINE L1 -1897 4249 4047 457 226 186 8 chr20 48668840 48668964 -23484918 - MLT1A2 LTR MaLR -49 325 180 23 0 0 0 chr20 48669252 48669275 -23484607 + AT_rich Low_complexity Low_complexity 1 23 0 292 197 15 15 chr20 48671148 48671214 -23482668 + MER94 DNA DNA 1 66 -68 334 357 28 7 chr20 48671369 48671512 -23482370 - MER117 DNA MER1_type -2 195 50 404 45 182 0 chr20 48671535 48671601 -23482281 + MADE1 DNA Mariner 1 78 -2 21 0 0 0 chr20 48671663 48671684 -23482198 + AT_rich Low_complexity Low_complexity 1 21 0 686 25 0 0 chr20 48671927 48672007 -23481875 - MADE1 DNA Mariner 0 80 1 869 301 70 33 chr20 48675366 48675695 -23478187 + LTR16C LTR ERVL 139 479 -12 21 71 0 0 chr20 48676550 48676592 -23477290 + AT_rich Low_complexity Low_complexity 1 42 0 1582 199 62 41 chr20 48677813 48678201 -23475681 + MSTD LTR MaLR 1 396 0 21 0 0 0 chr20 48679281 48679302 -23474580 + AT_rich Low_complexity Low_complexity 1 21 0 266 335 13 63 chr20 48679909 48680067 -23473815 + MER5B DNA MER1_type 11 160 -18 222 211 0 0 chr20 48680430 48680482 -23473400 + (TGAA)n Simple_repeat Simple_repeat 1 52 0 225 356 85 8 chr20 48680486 48680604 -23473278 - L2 LINE L2 -13 3259 3133 237 244 107 47 chr20 48680715 48681014 -23472868 + L1ME LINE L1 2920 3236 -2910 151 37 0 5 chr20 48681204 48681308 -23472574 + AT_rich Low_complexity Low_complexity 1 104 -113 2114 73 3 14 chr20 48681308 48681595 -23472287 + L1PA7 LINE L1 5864 6147 -7 151 37 0 5 chr20 48681595 48681708 -23472174 + AT_rich Low_complexity Low_complexity 104 217 0 21 0 0 0 chr20 48681960 48681981 -23471901 + AT_rich Low_complexity Low_complexity 1 21 0 2474 171 22 35 chr20 48681996 48682487 -23471395 - LTR45B LTR ERV1 -2 487 3 315 300 97 34 chr20 48682542 48682941 -23470941 + L1ME LINE L1 3817 4241 -1905 201 94 0 0 chr20 48683001 48683033 -23470849 + (TAAAAA)n Simple_repeat Simple_repeat 2 33 0 1103 184 10 0 chr20 48683034 48683240 -23470642 - MER2 DNA MER2_type -136 209 2 2558 41 0 29 chr20 48683428 48683743 -23470139 - AluY SINE Alu -5 306 1 253 239 111 0 chr20 48683870 48683987 -23469895 + L1ME LINE L1 4564 4693 -1453 24 0 0 0 chr20 48684223 48684247 -23469635 + AT_rich Low_complexity Low_complexity 1 24 0 349 261 43 53 chr20 48684303 48684491 -23469391 + L1ME LINE L1 5101 5286 -860 270 305 59 21 chr20 48684574 48684813 -23469069 + L1ME LINE L1 5370 5617 -553 1926 131 0 59 chr20 48684820 48685126 -23468756 + AluSq SINE Alu 3 290 -23 180 0 0 0 chr20 48685129 48685149 -23468733 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 192 97 0 0 chr20 48685601 48685632 -23468250 + (TG)n Simple_repeat Simple_repeat 1 31 0 228 268 169 0 chr20 48686962 48687033 -23466849 - L2 LINE L2 0 3313 3231 629 295 62 38 chr20 48687860 48688148 -23465734 - L2 LINE L2 -124 3189 2895 432 343 71 25 chr20 48688472 48688796 -23465086 - L1 LINE L1 -1793 4353 4015 533 262 7 7 chr20 48688812 48688953 -23464929 - L1ME1 LINE L1 -7 6159 6019 * 591 289 94 18 chr20 48688947 48689286 -23464596 - L1 LINE L1 -2173 3973 3609 * 859 302 83 18 chr20 48689284 48689882 -23464000 - L1MDb LINE L1 -4708 2430 1757 * 2796 191 24 66 chr20 48689877 48691090 -23462792 - L1MA5A LINE L1 -33 6264 5151 472 255 68 45 chr20 48691102 48691439 -23462443 - L1MDb LINE L1 -5187 1672 1328 488 258 14 109 chr20 48691475 48691750 -23462132 - L1MDb LINE L1 -5532 1415 1167 325 319 14 71 chr20 48691873 48692083 -23461799 - L1MDb LINE L1 -5602 1345 1148 523 282 67 35 chr20 48692102 48692357 -23461525 - MLT1J LTR MaLR -35 476 214 423 283 0 55 chr20 48692427 48692572 -23461310 - MLT1J LTR MaLR -327 184 48 359 280 136 42 chr20 48693713 48693927 -23459955 + MIR SINE MIR 18 251 -11 217 206 22 0 chr20 48694122 48694214 -23459668 + (TA)n Simple_repeat Simple_repeat 1 94 0 1107 299 107 19 chr20 48695299 48695721 -23458161 + L2 LINE L2 2492 2950 -364 718 175 0 12 chr20 48696723 48696883 -23456999 + CT-rich Low_complexity Low_complexity 4 161 0 217 135 39 19 chr20 48696901 48696953 -23456929 + C-rich Low_complexity Low_complexity 4 56 0 1212 219 3 57 chr20 48697501 48697798 -23456084 - AluJo SINE Alu -30 282 2 3013 103 39 47 chr20 48698311 48698823 -23455059 + L1PB2 LINE L1 5642 6149 -2 279 71 0 0 chr20 48698887 48698929 -23454953 + (CA)n Simple_repeat Simple_repeat 2 43 0 186 395 25 8 chr20 48699492 48699611 -23454271 - MIR SINE MIR -63 145 25 204 260 0 110 chr20 48700008 48700081 -23453801 - L2 LINE L2 -69 3203 3139 514 304 124 25 chr20 48700138 48700421 -23453461 + MLT1J LTR MaLR 1 311 -200 1856 146 70 0 chr20 48701121 48701436 -23452446 + MER1B DNA MER1_type 1 337 0 21 0 0 0 chr20 48701922 48701943 -23451939 + AT_rich Low_complexity Low_complexity 1 21 0 742 291 65 62 chr20 48702906 48703322 -23450560 - LTR16A1 LTR ERVL -40 417 1 263 293 27 13 chr20 48704063 48704138 -23449744 - MIR3 SINE MIR -11 197 122 527 247 78 30 chr20 48704193 48704359 -23449523 + MIR SINE MIR 78 251 -11 192 171 86 0 chr20 48704366 48704401 -23449481 - MIR SINE MIR -156 106 69 33 73 0 0 chr20 48704427 48704495 -23449387 + AT_rich Low_complexity Low_complexity 1 68 0 388 274 32 105 chr20 48704558 48704748 -23449134 + MIR SINE MIR 15 190 -72 263 256 23 12 chr20 48705439 48705525 -23448357 - MLT1J LTR MaLR 0 511 425 1011 152 39 22 chr20 48705589 48705820 -23448062 - L1MA8 LINE L1 -11 6280 6046 302 277 38 41 chr20 48705855 48706073 -23447809 - MLT1J2 LTR MaLR -202 309 63 186 133 0 0 chr20 48706095 48706125 -23447757 + (CAAAG)n Simple_repeat Simple_repeat 3 32 0 24 53 0 0 chr20 48706191 48706229 -23447653 + AT_rich Low_complexity Low_complexity 1 38 0 25 75 0 0 chr20 48706255 48706308 -23447574 + AT_rich Low_complexity Low_complexity 1 53 0 2714 216 52 68 chr20 48707401 48708544 -23445338 - L1ME1 LINE L1 -5 6161 5040 308 349 65 35 chr20 48709040 48709269 -23444613 - MIR SINE MIR -24 238 3 221 154 0 0 chr20 48709354 48709393 -23444489 + (CA)n Simple_repeat Simple_repeat 2 40 0 493 275 76 95 chr20 48709692 48710008 -23443874 + MLT1H LTR MaLR 31 340 -209 234 175 127 0 chr20 48710072 48710135 -23443747 + MLT1J1 LTR MaLR 354 424 -22 471 394 12 4 chr20 48710661 48710907 -23442975 + MIR SINE MIR 13 260 -2 403 271 31 0 chr20 48710888 48710984 -23442898 - MIR SINE MIR -91 171 73 * 180 286 120 30 chr20 48711807 48711940 -23441942 - MIR SINE MIR -8 254 110 345 336 21 29 chr20 48712045 48712185 -23441697 + L2 LINE L2 3134 3272 0 453 326 58 11 chr20 48712418 48712608 -23441274 - L2 LINE L2 0 3313 3115 24 0 0 0 chr20 48712962 48712986 -23440896 + AT_rich Low_complexity Low_complexity 1 24 0 223 362 9 19 chr20 48712990 48713095 -23440787 - L3 LINE CR1 0 1577 1474 249 341 40 72 chr20 48713108 48713235 -23440647 - L2 LINE L2 -859 2455 2326 1055 174 63 5 chr20 48713235 48713442 -23440440 - MER20 DNA MER1_type 0 219 1 249 341 40 72 chr20 48713442 48713789 -23440093 - L2 LINE L2 -988 2326 1996 2011 135 10 3 chr20 48714000 48714289 -23439593 + AluSc SINE Alu 3 293 -16 205 263 0 0 chr20 48715305 48715362 -23438520 - MIR SINE MIR -75 133 77 1998 275 35 26 chr20 48716384 48717065 -23436817 - L1ME3 LINE L1 -13 6944 6258 21 36 0 0 chr20 48717175 48717203 -23436679 + AT_rich Low_complexity Low_complexity 1 28 0 290 282 110 25 chr20 48717477 48717640 -23436242 - MIR SINE MIR -34 228 52 1008 211 38 35 chr20 48717943 48718204 -23435678 - MLT1H1 LTR MaLR 0 555 294 1819 153 172 5 chr20 48719503 48719870 -23434012 - MSTA LTR MaLR 0 428 1 21 0 0 0 chr20 48721368 48721389 -23432493 + AT_rich Low_complexity Low_complexity 1 21 0 2135 76 7 13 chr20 48722070 48722374 -23431508 + L1PA13 LINE L1 5862 6163 0 243 0 0 0 chr20 48722483 48722510 -23431372 + (TG)n Simple_repeat Simple_repeat 2 28 0 247 184 61 0 chr20 48722819 48722868 -23431014 + MLT1F1 LTR MaLR 66 117 -450 2257 207 53 16 chr20 48722870 48723012 -23430870 + L1MD3 LINE L1 7389 7524 -471 2673 142 16 7 chr20 48723012 48723436 -23430446 - MSTA LTR MaLR 0 428 1 2257 207 53 16 chr20 48723436 48723863 -23430019 + L1MD3 LINE L1 7524 7979 -16 2041 114 6 3 chr20 48723911 48724227 -23429655 - L1PA8 LINE L1 -11 6161 5845 424 344 38 27 chr20 48724841 48725027 -23428855 - MIR SINE MIR -12 250 63 498 238 172 0 chr20 48725140 48725291 -23428591 - MER5A DNA MER1_type 0 189 13 1428 135 5 0 chr20 48725430 48725638 -23428244 + AluSg/x SINE Alu 86 294 -18 188 318 0 0 chr20 48726010 48726054 -23427828 + L2 LINE L2 3217 3260 -12 2525 235 99 24 chr20 48726104 48727066 -23426816 - L1ME3 LINE L1 -895 6046 5013 996 234 40 43 chr20 48727172 48727570 -23426312 - L1ME3 LINE L1 -3087 3854 3458 2209 59 39 0 chr20 48727605 48727891 -23425991 - L1PA8A LINE L1 -180 5951 5655 5892 105 20 2 chr20 48727898 48727912 -23425970 - L1PA8A LINE L1 -325 5806 5794 288 0 0 0 chr20 48727912 48727944 -23425938 + (TA)n Simple_repeat Simple_repeat 2 33 0 5892 105 20 2 chr20 48727944 48729202 -23424680 - L1PA8A LINE L1 -337 5794 4508 3280 97 23 4 chr20 48729202 48729685 -23424197 + L1PA8A LINE L1 4023 4514 -1632 423 259 108 11 chr20 48729683 48729868 -23424014 - L1M4 LINE L1 -3291 2855 2653 * 229 261 20 77 chr20 48730014 48730209 -23423673 - L1ME3 LINE L1 -4965 1458 1275 465 34 0 0 chr20 48730598 48730657 -23423225 + (TG)n Simple_repeat Simple_repeat 2 60 0 406 283 36 22 chr20 48730865 48731003 -23422879 + L2 LINE L2 3171 3310 -3 211 304 78 35 chr20 48731438 48731553 -23422329 + L2 LINE L2 3153 3272 0 272 250 69 14 chr20 48733975 48734047 -23419835 - L2 LINE L2 -7 3265 3190 380 279 90 0 chr20 48734097 48734208 -23419674 - MIR SINE MIR -1 261 141 286 323 12 3 chr20 48734569 48734782 -23419100 - L1ME LINE L1 -366 5804 5444 33 25 0 0 chr20 48735066 48735106 -23418776 + AT_rich Low_complexity Low_complexity 1 40 0 992 204 0 24 chr20 48735989 48736195 -23417687 + MER3 DNA MER1_type 8 208 -1 398 310 62 40 chr20 48736252 48736675 -23417207 + L1MEc LINE L1 1261 1692 -4704 21 0 0 0 chr20 48737353 48737374 -23416508 + AT_rich Low_complexity Low_complexity 1 21 0 26 0 0 0 chr20 48737660 48737686 -23416196 + AT_rich Low_complexity Low_complexity 1 26 0 2366 104 0 0 chr20 48738188 48738497 -23415385 + AluSg SINE Alu 1 309 -1 186 43 0 0 chr20 48738580 48738603 -23415279 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 25 31 0 0 chr20 48738898 48738930 -23414952 + AT_rich Low_complexity Low_complexity 1 32 0 323 188 38 12 chr20 48739297 48739377 -23414505 - L1ME2 LINE L1 -52 6112 6031 298 0 48 0 chr20 48740394 48740436 -23413446 + (TG)n Simple_repeat Simple_repeat 2 45 0 708 208 161 47 chr20 48741236 48741510 -23412372 - Charlie4a DNA MER1_type -17 491 187 405 70 0 0 chr20 48741991 48742048 -23411834 + (TG)n Simple_repeat Simple_repeat 1 57 0 679 304 18 22 chr20 48742083 48742310 -23411572 + MIR SINE MIR 1 226 -36 294 350 39 14 chr20 48742831 48743024 -23410858 + MIR SINE MIR 1 196 -66 1521 213 121 69 chr20 48743708 48744230 -23409652 - MLT1H LTR MaLR 0 549 1 206 186 0 23 chr20 48745387 48745430 -23408452 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 297 299 121 53 chr20 48745436 48745643 -23408239 - MIR SINE MIR -15 247 27 1859 167 0 13 chr20 48745909 48746221 -23407661 - AluJb SINE Alu 0 312 5 207 171 73 0 chr20 48746361 48746402 -23407480 + L2 LINE L2 3221 3264 -8 206 164 27 55 chr20 48746632 48746705 -23407177 + T-rich Low_complexity Low_complexity 4 74 0 242 293 28 38 chr20 48746764 48746870 -23407012 + MIR SINE MIR 78 182 -80 9356 20 4 0 chr20 48746883 48748686 -23405196 - L1PA2 LINE L1 0 6155 4352 2431 61 6 3 chr20 48748686 48748993 -23404889 - L1P LINE L1 -5832 314 7 307 324 90 7 chr20 48749373 48749518 -23404364 + L2 LINE L2 3116 3272 0 1563 169 64 10 chr20 48749635 48749931 -23403951 + AluJb SINE Alu 1 312 0 21 0 0 0 chr20 48750725 48750746 -23403136 + AT_rich Low_complexity Low_complexity 1 21 0 27459 144 13 14 chr20 48750898 48757310 -23396572 + L1PA8 LINE L1 3 6477 -10 1045 271 173 18 chr20 48758414 48758871 -23395011 - MLT1H LTR MaLR 0 549 22 382 305 96 23 chr20 48759261 48759438 -23394444 + L2 LINE L2 3124 3313 0 460 275 144 6 chr20 48761381 48761541 -23392341 + MIR SINE MIR 80 261 -1 387 261 0 23 chr20 48761543 48761631 -23392251 + MER21B LTR ERV1 1 86 -777 3218 227 73 25 chr20 48761658 48762461 -23391421 + MER21B LTR ERV1 20 861 -2 23 0 0 0 chr20 48762479 48762502 -23391380 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr20 48762917 48762940 -23390942 + AT_rich Low_complexity Low_complexity 1 23 0 2370 102 0 0 chr20 48763542 48763837 -23390045 + AluSg SINE Alu 1 295 -15 809 230 73 11 chr20 48765722 48765913 -23387969 + MIR SINE MIR 13 215 -47 677 187 0 0 chr20 48766109 48766216 -23387666 - MER63A DNA MER1_type -33 177 71 389 296 138 39 chr20 48766376 48766425 -23387457 - MIR SINE MIR 0 262 219 1882 163 7 7 chr20 48766425 48766725 -23387157 - AluSx SINE Alu -12 300 1 389 296 138 39 chr20 48766725 48766878 -23387004 - MIR SINE MIR -43 219 40 231 268 71 79 chr20 48767063 48767190 -23386692 - L2 LINE L2 -2 3270 3145 307 286 25 17 chr20 48767290 48767409 -23386473 + MIR SINE MIR 117 236 -26 1349 258 75 52 chr20 48767680 48767774 -23386108 + L2 LINE L2 2687 2777 -536 2206 108 10 10 chr20 48767774 48768069 -23385813 + AluSc SINE Alu 1 295 -14 2130 118 0 0 chr20 48768076 48768356 -23385526 + AluSx SINE Alu 1 280 -32 324 0 0 0 chr20 48768356 48768392 -23385490 + (TAAA)n Simple_repeat Simple_repeat 4 39 0 1349 258 75 52 chr20 48768392 48768927 -23384955 + L2 LINE L2 2781 3313 0 580 267 7 0 chr20 48768928 48769074 -23384808 + MIR SINE MIR 98 244 -18 366 248 16 64 chr20 48769744 48769869 -23384013 + MIR SINE MIR 79 197 -65 192 77 0 0 chr20 48770475 48770501 -23383381 + (TCCA)n Simple_repeat Simple_repeat 2 27 0 867 213 30 42 chr20 48771170 48771433 -23382449 + MIR SINE MIR 3 262 0 183 80 0 0 chr20 48771716 48771741 -23382141 + (TC)n Simple_repeat Simple_repeat 2 26 0 42 82 0 0 chr20 48772168 48772266 -23381616 + AT_rich Low_complexity Low_complexity 1 98 0 316 270 58 51 chr20 48772297 48772434 -23381448 - MIR SINE MIR -107 155 18 497 190 18 0 chr20 48773846 48774014 -23379868 + CT-rich Low_complexity Low_complexity 1 171 0 297 348 38 38 chr20 48774724 48774882 -23379000 - L2 LINE L2 -74 3198 3041 268 345 69 0 chr20 48775403 48775548 -23378334 - MIR SINE MIR -52 210 56 2210 103 3 10 chr20 48776050 48776350 -23377532 - AluY SINE Alu -13 298 1 213 94 0 0 chr20 48776363 48776395 -23377487 + (TGAA)n Simple_repeat Simple_repeat 3 34 0 408 262 0 0 chr20 48776415 48776499 -23377383 + MIR SINE MIR 5 88 -174 331 282 112 27 chr20 48776767 48776955 -23376927 - MIR SINE MIR -1 261 58 269 183 108 179 chr20 48777921 48778172 -23375710 + MLT1H LTR MaLR 123 355 -194 232 211 53 0 chr20 48778247 48778304 -23375578 + MLT1I LTR MaLR 347 406 -3 287 350 0 10 chr20 48780075 48780178 -23373704 + (CATA)n Simple_repeat Simple_repeat 3 104 0 210 287 0 0 chr20 48780184 48780271 -23373611 + (CA)n Simple_repeat Simple_repeat 1 87 0 222 220 66 44 chr20 48780273 48780364 -23373518 + (CATG)n Simple_repeat Simple_repeat 2 94 0 900 254 37 0 chr20 48780394 48780611 -23373271 - MIR SINE MIR -6 256 32 1437 223 10 16 chr20 48780612 48780926 -23372956 - AluJo SINE Alu 0 312 1 228 341 0 24 chr20 48781568 48781653 -23372229 + L2 LINE L2 3180 3262 -10 218 233 23 0 chr20 48781705 48781748 -23372134 - L2 LINE L2 -91 3181 3138 324 0 0 0 chr20 48781851 48781887 -23371995 + (CA)n Simple_repeat Simple_repeat 2 37 0 368 268 95 96 chr20 48782902 48783024 -23370858 + MLT1J LTR MaLR 1 122 -389 1139 237 14 0 chr20 48783024 48783239 -23370643 + MER20 DNA MER1_type 2 219 0 368 268 95 96 chr20 48783239 48783491 -23370391 + MLT1J LTR MaLR 122 318 -193 2671 26 3 0 chr20 48784090 48784393 -23369489 + AluY SINE Alu 1 304 -7 426 280 229 0 chr20 48785354 48785529 -23368353 - MIR SINE MIR -16 246 32 845 122 0 7 chr20 48786334 48786482 -23367400 + (TCCA)n Simple_repeat Simple_repeat 2 148 0 493 346 94 26 chr20 48786482 48787202 -23366680 - L2 LINE L2 0 3313 2538 220 264 142 61 chr20 48787276 48787424 -23366458 - L2 LINE L2 -1 3271 3112 2524 221 87 40 chr20 48787889 48788663 -23365219 - L1ME1 LINE L1 -4 6162 5353 597 305 33 19 chr20 48790080 48790290 -23363592 - MIR SINE MIR -2 260 48 323 303 77 29 chr20 48790735 48790943 -23362939 + L1M4 LINE L1 4381 4598 -1548 723 205 225 30 chr20 48791064 48791413 -23362469 - L1ME3 LINE L1 -87 6075 5653 218 186 47 0 chr20 48791420 48791506 -23362376 + (TA)n Simple_repeat Simple_repeat 1 90 0 318 266 139 52 chr20 48791506 48791679 -23362203 - L1ME3 LINE L1 -518 5652 5465 637 210 48 0 chr20 48791681 48791805 -23362077 + MER20 DNA MER1_type 90 219 0 1416 280 91 38 chr20 48791827 48792090 -23361792 - L1ME3 LINE L1 -1096 5050 4802 2030 103 70 28 chr20 48792090 48792449 -23361433 + THE1C LTR MaLR 1 374 -1 1416 280 91 38 chr20 48792449 48793148 -23360734 - L1ME3 LINE L1 -1344 4802 4037 1793 278 56 34 chr20 48793712 48794248 -23359634 - L1ME3 LINE L1 -2393 3753 3231 2794 101 0 3 chr20 48794248 48794624 -23359258 - THE1C LTR MaLR 0 375 1 1793 278 56 34 chr20 48794624 48795378 -23358504 - L1ME3 LINE L1 -2915 3231 2390 321 267 8 16 chr20 48795437 48795679 -23358203 - L1ME LINE L1 -704 5462 5187 233 236 0 0 chr20 48795759 48795831 -23358051 - L1 LINE L1 -1701 4445 4374 21 0 0 0 chr20 48795870 48795891 -23357991 + AT_rich Low_complexity Low_complexity 1 21 0 305 274 89 50 chr20 48796118 48796399 -23357483 + L1M4 LINE L1 4756 5047 -1099 24 67 0 0 chr20 48796479 48796524 -23357358 + AT_rich Low_complexity Low_complexity 1 45 0 222 221 35 12 chr20 48796586 48796672 -23357210 + (TTA)n Simple_repeat Simple_repeat 2 89 0 430 313 73 41 chr20 48796675 48797183 -23356699 + L1P4 LINE L1 5282 5805 -356 246 333 139 8 chr20 48797861 48797990 -23355892 + L2 LINE L2 2975 3120 -193 333 329 93 42 chr20 48798424 48798852 -23355030 - L1 LINE L1 -3366 2780 2331 23 54 0 0 chr20 48799343 48799380 -23354502 + AT_rich Low_complexity Low_complexity 1 37 0 473 322 118 23 chr20 48799952 48800343 -23353539 - HAL1 LINE L1 -978 1529 1102 2090 139 0 0 chr20 48800661 48800963 -23352919 + AluSx SINE Alu 1 302 -10 2282 200 85 11 chr20 48801770 48802325 -23351557 + L1MD3 LINE L1 7400 7995 0 18768 33 4 1 chr20 48803658 48806767 -23347115 - L1PA4 LINE L1 0 6155 3087 2994 40 5 0 chr20 48806767 48807146 -23346736 + L1P LINE L1 2037 2417 -3729 1378 98 0 73 chr20 48807146 48807351 -23346531 + AluSg/x SINE Alu 106 295 -17 1193 213 33 69 chr20 48807379 48807640 -23346242 - L1MCb LINE L1 -3396 3168 2899 2060 148 3 0 chr20 48807640 48807950 -23345932 - AluSx SINE Alu -1 311 1 1193 213 33 69 chr20 48807950 48808000 -23345882 - L1MCb LINE L1 -3665 2899 2849 2678 88 6 0 chr20 48808000 48808353 -23345529 + THE1A LTR MaLR 1 355 0 1193 213 33 69 chr20 48808353 48808491 -23345391 - L1MCb LINE L1 -3715 2849 2734 354 172 23 23 chr20 48808486 48808573 -23345309 - L1MC3 LINE L1 0 7785 7699 * 318 228 98 22 chr20 48808574 48808666 -23345216 + MLT1C LTR MaLR 2 100 -367 1290 194 145 18 chr20 48808666 48809067 -23344815 - L1MCb LINE L1 -4234 2330 1879 2384 235 28 14 chr20 48809069 48809648 -23344234 - L1MB5 LINE L1 -2 6172 5586 3922 223 72 138 chr20 48809648 48811404 -23342478 - L1MCb LINE L1 -4761 1803 1 1696 237 48 54 chr20 48811400 48811883 -23341999 - L1MEc LINE L1 -3960 2436 1956 * 1970 128 0 4 chr20 48811883 48812196 -23341686 - AluSg SINE Alu 0 321 10 1696 237 48 54 chr20 48812196 48812382 -23341500 - L1MEc LINE L1 -4440 1956 1770 1621 219 57 63 chr20 48812390 48812898 -23340984 + MLT1D LTR MaLR 1 505 0 703 226 42 15 chr20 48812900 48813137 -23340745 + MER106B DNA MER1_type 2 1059 0 1159 283 95 25 chr20 48813161 48814222 -23339660 - L1MEc LINE L1 -4513 1702 600 391 230 28 22 chr20 48815171 48815349 -23338533 + (TA)n Simple_repeat Simple_repeat 2 180 0 304 195 45 10 chr20 48815387 48815683 -23338199 + (TA)n Simple_repeat Simple_repeat 1 306 0 259 298 48 19 chr20 48815813 48815900 -23337982 + MLT1K LTR MaLR 447 536 -52 1470 289 28 11 chr20 48815900 48816357 -23337525 - LTR16C LTR ERVL 0 491 27 304 386 18 0 chr20 48817405 48817519 -23336363 - L2 LINE L2 -20 3252 3137 337 247 62 41 chr20 48817547 48817644 -23336238 + MIR SINE MIR 98 196 -66 491 295 13 0 chr20 48818588 48818737 -23335145 - MIR SINE MIR 0 262 112 518 113 0 0 chr20 48819022 48819102 -23334780 + MADE1 DNA Mariner 1 80 0 2154 247 89 4 chr20 48819489 48820028 -23333854 + MLT1E LTR MaLR 1 585 -8 474 294 72 13 chr20 48820460 48820613 -23333269 - MIR SINE MIR -53 209 48 246 310 60 10 chr20 48821539 48821639 -23332243 + L2 LINE L2 3168 3272 0 292 250 250 10 chr20 48822567 48822671 -23331211 + MIR SINE MIR 61 189 -73 340 313 60 40 chr20 48822713 48823182 -23330700 + L1ME LINE L1 4336 4813 -1333 225 0 0 0 chr20 48823223 48823248 -23330634 + (TA)n Simple_repeat Simple_repeat 1 25 0 356 304 151 45 chr20 48823291 48823643 -23330239 + L1ME LINE L1 4902 5290 -856 227 290 95 12 chr20 48823669 48823838 -23330044 + L1ME LINE L1 5336 5518 -644 38 22 0 0 chr20 48823853 48823898 -23329984 + AT_rich Low_complexity Low_complexity 1 45 0 7726 16 0 0 chr20 48823966 48825311 -23328571 - L1PA3 LINE L1 0 6155 4815 466 317 14 0 chr20 48825533 48825675 -23328207 + MER58B DNA MER1_type 198 341 0 258 105 0 0 chr20 48826155 48826193 -23327689 + (CAT)n Simple_repeat Simple_repeat 1 38 0 400 316 134 18 chr20 48826435 48826777 -23327105 + MLT1I LTR MaLR 28 409 0 289 310 143 32 chr20 48826890 48827067 -23326815 - L3 LINE CR1 -126 1451 1244 2037 200 87 11 chr20 48827067 48827536 -23326346 + MLT1D LTR MaLR 1 505 0 289 310 143 32 chr20 48827536 48827574 -23326308 - L3 LINE CR1 -333 1244 1212 192 267 27 113 chr20 48827783 48827933 -23325949 - L3 LINE CR1 -639 938 802 512 286 42 31 chr20 48828148 48828340 -23325542 - MIR SINE MIR -64 198 5 1720 156 7 3 chr20 48829018 48829300 -23324582 + L1M4 LINE L1 5369 5651 -533 2109 124 39 39 chr20 48829415 48829779 -23324103 - THE1B LTR MaLR 0 364 1 318 338 84 58 chr20 48830760 48831210 -23322672 - L1MEc LINE L1 -4187 2209 1748 303 181 14 42 chr20 48831310 48831382 -23322500 - MIR SINE MIR -109 153 84 444 320 54 0 chr20 48832542 48832689 -23321193 + MIR SINE MIR 58 212 -50 1079 206 13 57 chr20 48833477 48833795 -23320087 + MER33 DNA MER1_type 1 290 -34 553 146 8 2 chr20 48833797 48834058 -23319824 + AluSx SINE Alu 1 309 0 258 108 0 0 chr20 48834060 48834097 -23319785 + MER33 DNA MER1_type 323 359 -4 1634 99 25 8 chr20 48834460 48834702 -23319180 + L1PB1 LINE L1 5906 6151 0 511 271 131 45 chr20 48835517 48835738 -23318144 - MIR SINE MIR -16 246 7 912 165 33 16 chr20 48835856 48836038 -23317844 + MER20 DNA MER1_type 31 215 -4 267 305 21 21 chr20 48836121 48836216 -23317666 - L2 LINE L2 0 3313 3219 414 338 116 35 chr20 48837007 48837578 -23316304 - L2 LINE L2 -188 3084 2468 307 283 94 63 chr20 48838316 48838475 -23315407 + MIR SINE MIR 28 191 -71 345 350 106 0 chr20 48839687 48839847 -23314035 - MIR3 SINE MIR -22 186 10 2464 228 158 40 chr20 48840759 48841530 -23312352 - MER21B LTR ERV1 -1 862 1 184 304 54 0 chr20 48841821 48841877 -23312005 + L2 LINE L2 3132 3190 -82 4292 184 35 35 chr20 48841906 48842043 -23311839 - L1MC4 LINE L1 0 8042 7906 255 79 0 0 chr20 48842043 48842081 -23311801 + (CA)n Simple_repeat Simple_repeat 2 39 0 4292 184 35 35 chr20 48842081 48842866 -23311016 - L1MC4 LINE L1 -135 7907 7120 8697 44 118 6 chr20 48844442 48845604 -23308278 - L1P LINE L1 -4371 1775 484 26493 26 0 0 chr20 48845604 48849344 -23304538 + L1PA2 LINE L1 2418 6155 0 25 31 0 0 chr20 48849786 48849818 -23304064 + AT_rich Low_complexity Low_complexity 1 32 0 267 234 94 0 chr20 48849905 48849969 -23303913 + MIR SINE MIR 122 191 -71 434 241 153 53 chr20 48850052 48850280 -23303602 + MLT1E2 LTR MaLR 2 252 -374 456 54 0 0 chr20 48850289 48850345 -23303537 - L1P1 LINE L1 -391 5764 5709 293 0 0 26 chr20 48850362 48850400 -23303482 + (TAA)n Simple_repeat Simple_repeat 3 39 0 1479 229 63 9 chr20 48850407 48850739 -23303143 + MLT1E2 LTR MaLR 269 618 -8 266 283 90 14 chr20 48850773 48850918 -23302964 - MIR SINE MIR -5 257 102 302 116 0 0 chr20 48851360 48851403 -23302479 - MER96B DNA MER1_type? -185 232 190 719 183 104 20 chr20 48851739 48851941 -23301941 + MER96B DNA MER1_type? 198 416 -1 267 152 0 0 chr20 48853819 48853865 -23300017 + A-rich Low_complexity Low_complexity 1 46 0 444 278 59 67 chr20 48855146 48855371 -23298511 + MLT1K LTR MaLR 49 305 -244 675 269 41 68 chr20 48855709 48856081 -23297801 + MLT1G3 LTR MaLR 1 335 -195 415 263 44 29 chr20 48856084 48856221 -23297661 + MLT1G3 LTR MaLR 454 592 -3 273 313 80 0 chr20 48857535 48857647 -23296235 - Tigger8 DNA MER2_type -436 230 110 467 297 126 18 chr20 48857732 48858018 -23295864 + L1MC4a LINE L1 5569 5885 -1923 257 345 18 35 chr20 48858589 48858702 -23295180 + Tigger8 DNA MER2_type 92 202 -464 572 335 65 20 chr20 48859138 48859386 -23294496 + MIR SINE MIR 3 261 -1 272 333 35 9 chr20 48859467 48859581 -23294301 + Tigger8 DNA MER2_type 520 636 -30 995 212 168 20 chr20 48859635 48860000 -23293882 - L1ME3 LINE L1 -11 6151 5680 1805 102 0 0 chr20 48860000 48860247 -23293635 + AluSg SINE Alu 59 305 0 995 212 168 20 chr20 48860247 48860345 -23293537 - L1ME3 LINE L1 -482 5680 5598 2974 91 3 0 chr20 48860458 48860821 -23293061 - THE1B LTR MaLR 0 364 1 252 337 22 0 chr20 48861435 48861527 -23292355 + MIR SINE MIR 11 104 -158 644 299 93 31 chr20 48862379 48862767 -23291115 - L1ME4a LINE L1 -160 5961 5550 2046 92 66 0 chr20 48862832 48863105 -23290777 + AluSc SINE Alu 1 291 -18 1471 183 0 64 chr20 48863354 48863665 -23290217 + AluJo SINE Alu 1 291 -21 1755 148 44 17 chr20 48863921 48864219 -23289663 + AluJo SINE Alu 1 306 -6 532 315 26 30 chr20 48865093 48865360 -23288522 + MLT1K LTR MaLR 316 581 -7 319 320 116 54 chr20 48865933 48866192 -23287690 - L2 LINE L2 -43 3229 2955 590 277 74 15 chr20 48867161 48867363 -23286519 + MIR SINE MIR 47 260 -2 1757 235 76 15 chr20 48868374 48868847 -23285035 + MLT1F LTR MaLR 1 502 -40 3712 118 34 31 chr20 48870073 48870304 -23283578 + MER41C LTR ERV1 1 230 -324 1890 139 0 56 chr20 48870304 48870607 -23283275 + AluSx SINE Alu 1 286 -26 3712 118 34 31 chr20 48870607 48870927 -23282955 + MER41C LTR ERV1 230 554 0 2658 138 55 33 chr20 48871112 48871569 -23282313 + MLT1C LTR MaLR 1 467 0 180 245 19 38 chr20 48871871 48871924 -23281958 + L2 LINE L2 3261 3312 -1 384 280 24 32 chr20 48873205 48873330 -23280552 - MER94 DNA DNA -1 133 10 523 270 156 23 chr20 48873436 48873699 -23280183 - LTR16C LTR ERVL -2 489 192 243 306 16 0 chr20 48873888 48873950 -23279932 + L2 LINE L2 3134 3196 -76 1807 150 20 20 chr20 48874219 48874519 -23279363 - AluJo SINE Alu -12 300 1 1458 226 87 34 chr20 48874909 48875321 -23278561 + MER63B DNA MER1_type 2 435 -1 435 296 5 82 chr20 48875559 48875755 -23278127 + LTR33 LTR ERVL 59 239 -282 315 277 21 11 chr20 48875865 48875959 -23277923 + LTR33 LTR ERVL 427 521 0 980 286 93 31 chr20 48876673 48877159 -23276723 + LTR33A LTR ERVL 5 520 -3 335 291 71 35 chr20 48877329 48877470 -23276412 + L2 LINE L2 3167 3312 -1 198 261 0 0 chr20 48877483 48877529 -23276353 - MIR SINE MIR -62 146 101 748 147 199 0 chr20 48878002 48878158 -23275724 - MER53 DNA DNA -2 187 1 207 292 158 0 chr20 48878240 48878360 -23275522 - MER5B DNA MER1_type -25 153 15 709 155 219 0 chr20 48878670 48878825 -23275057 - MER53 DNA DNA 0 189 1 5066 151 21 32 chr20 48878913 48879278 -23274604 - L1PA16 LINE L1 -8 6158 5791 672 52 67 0 chr20 48879278 48879413 -23274469 + (TA)n Simple_repeat Simple_repeat 2 145 0 5066 151 21 32 chr20 48879413 48880179 -23273703 - L1PA16 LINE L1 -375 5791 5041 398 234 318 21 chr20 48880632 48880871 -23273011 - L2 LINE L2 0 3313 3004 511 326 21 5 chr20 48881115 48881302 -23272580 + MIR SINE MIR 8 197 -65 654 224 34 14 chr20 48881341 48881488 -23272394 + MER63A DNA MER1_type 23 172 -38 1180 185 22 36 chr20 48881633 48881855 -23272027 - MER20 DNA MER1_type 0 219 1 454 237 82 22 chr20 48882070 48882205 -23271677 + MIR3 SINE MIR 2 144 -64 244 279 96 48 chr20 48883259 48883363 -23270519 + MIR SINE MIR 32 140 -122 387 290 36 51 chr20 48883399 48883537 -23270345 - L2 LINE L2 0 3272 3137 1078 288 80 5 chr20 48883604 48883990 -23269892 + L2 LINE L2 2898 3312 -1 198 0 0 0 chr20 48885135 48885157 -23268725 + (TG)n Simple_repeat Simple_repeat 2 23 0 291 362 60 40 chr20 48885236 48885435 -23268447 + L2 LINE L2 2584 2786 -528 21 0 0 0 chr20 48886816 48886837 -23267045 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr20 48887051 48887073 -23266809 + AT_rich Low_complexity Low_complexity 1 22 0 632 292 0 0 chr20 48887869 48888023 -23265859 + MIR SINE MIR 36 189 -73 1188 280 93 23 chr20 48888074 48888723 -23265159 - L2 LINE L2 -8 3305 2594 219 296 80 40 chr20 48889607 48889732 -23264150 + L2 LINE L2 2535 2664 -650 202 342 11 114 chr20 48889967 48890151 -23263731 + L2 LINE L2 3016 3180 -92 427 325 29 48 chr20 48890331 48890537 -23263345 - MIR SINE MIR -50 212 11 250 374 107 33 chr20 48891051 48891388 -23262494 - L2 LINE L2 -4 3309 2948 250 291 89 0 chr20 48892174 48892253 -23261629 - MIR SINE MIR -78 184 99 369 213 32 11 chr20 48892392 48892486 -23261396 - MIR SINE MIR -98 164 69 1026 265 8 22 chr20 48894997 48895265 -23258617 - MLT1H1 LTR MaLR 0 555 292 405 143 8 193 chr20 48895324 48895443 -23258439 - FRAM SINE Alu -17 159 63 517 301 28 23 chr20 48895445 48895621 -23258261 - MLT1H1 LTR MaLR -318 237 61 320 318 64 40 chr20 48896477 48896650 -23257232 - MER5B DNA MER1_type -1 177 1 668 319 52 4 chr20 48897118 48897350 -23256532 + MIR SINE MIR 5 247 -15 3787 176 67 20 chr20 48897371 48897718 -23256164 - L1MB1 LINE L1 -1 6167 5838 2099 111 10 3 chr20 48897718 48898007 -23255875 + AluSq SINE Alu 1 291 -22 3787 176 67 20 chr20 48898007 48898445 -23255437 - L1MB1 LINE L1 -330 5838 5345 1122 206 13 0 chr20 48898440 48898673 -23255209 + L1 LINE L1 5023 5258 -888 * 240 269 159 68 chr20 48898688 48899097 -23254785 + L2 LINE L2 2412 2857 -457 192 323 112 37 chr20 48899173 48899334 -23254548 + L2 LINE L2 2919 3091 -181 377 289 87 13 chr20 48899447 48899596 -23254286 + MIR SINE MIR 103 262 0 203 234 142 78 chr20 48899593 48899734 -23254148 + L2 LINE L2 3163 3312 -1 * 349 291 24 16 chr20 48899845 48899972 -23253910 + CT-rich Low_complexity Low_complexity 3 130 0 849 236 50 46 chr20 48900128 48900387 -23253495 + MLT1F1 LTR MaLR 308 567 0 876 225 29 0 chr20 48900718 48900891 -23252991 + MER5A DNA MER1_type 1 178 -11 284 270 140 78 chr20 48900895 48901464 -23252418 - L1MC/D LINE L1 -463 5658 5346 2394 85 0 3 chr20 48901883 48902189 -23251693 - AluSx SINE Alu -3 309 5 183 114 0 0 chr20 48902207 48902242 -23251640 + (T)n Simple_repeat Simple_repeat 1 35 0 929 208 101 39 chr20 48902419 48902626 -23251256 - MER58A DNA MER1_type -4 220 1 244 307 0 23 chr20 48902698 48902786 -23251096 + CT-rich Low_complexity Low_complexity 5 90 0 242 281 11 0 chr20 48902814 48902903 -23250979 + MIR SINE MIR 100 189 -73 2638 186 17 9 chr20 48903556 48904019 -23249863 + MLT1C LTR MaLR 1 467 0 616 295 13 50 chr20 48904072 48904317 -23249565 - MIR SINE MIR -16 246 13 327 317 89 17 chr20 48905157 48905337 -23248545 + MIR SINE MIR 33 225 -37 480 286 103 19 chr20 48906717 48906930 -23246952 - MIR SINE MIR -22 240 10 21 36 0 0 chr20 48907161 48907189 -23246693 + AT_rich Low_complexity Low_complexity 1 28 0 486 309 12 70 chr20 48907322 48907403 -23246479 - MIR SINE MIR -14 248 164 490 227 241 0 chr20 48907403 48907544 -23246338 + MER96 DNA MER1_type 1 175 0 486 309 12 70 chr20 48907544 48907705 -23246177 - MIR SINE MIR -98 164 20 216 0 0 0 chr20 48907893 48907917 -23245965 + (T)n Simple_repeat Simple_repeat 1 24 0 1236 173 0 41 chr20 48907930 48908150 -23245732 - AluJb SINE Alu -101 211 1 529 51 0 25 chr20 48908178 48908257 -23245625 + (GGAA)n Simple_repeat Simple_repeat 4 80 0 286 241 13 25 chr20 48908322 48908401 -23245481 - MLT1K LTR MaLR 0 588 511 200 194 0 0 chr20 48908507 48908543 -23245339 + CT-rich Low_complexity Low_complexity 2 37 0 402 100 0 0 chr20 48908543 48908603 -23245279 + (CACCAT)n Simple_repeat Simple_repeat 3 62 0 180 176 0 0 chr20 48909065 48909099 -23244783 + (TTCA)n Simple_repeat Simple_repeat 4 37 0 195 42 0 0 chr20 48909494 48909518 -23244364 + (GA)n Simple_repeat Simple_repeat 2 25 0 518 272 6 31 chr20 48909867 48910029 -23243853 + MER105 DNA DNA 3 160 -44 2223 97 19 16 chr20 48910252 48910561 -23243321 + AluSg SINE Alu 1 310 0 636 268 88 70 chr20 48910800 48911128 -23242754 + LTR16A LTR ERVL 93 426 -24 217 279 82 16 chr20 48911258 48911319 -23242563 - L2 LINE L2 0 3313 3249 969 285 77 15 chr20 48911569 48911959 -23241923 + MLT1J2 LTR MaLR 37 450 0 198 327 77 19 chr20 48911972 48912128 -23241754 - L2 LINE L2 -1594 1720 1556 457 265 8 8 chr20 48912533 48912665 -23241217 - MIR SINE MIR 0 262 131 251 165 117 78 chr20 48912665 48912768 -23241114 + L1ME4a LINE L1 5978 6084 -37 911 304 45 51 chr20 48913153 48913647 -23240235 - LTR16C LTR ERVL 0 491 1 587 264 0 21 chr20 48914686 48914826 -23239056 - MIR3 SINE MIR -32 176 40 502 329 31 31 chr20 48914999 48915224 -23238658 + MIR SINE MIR 20 244 -18 1502 168 53 33 chr20 48915373 48915677 -23238205 - AluJo SINE Alu -2 310 1 249 366 54 0 chr20 48916277 48916370 -23237512 + L2 LINE L2 3167 3264 -8 180 274 123 19 chr20 48917421 48917527 -23236355 + MIR SINE MIR 146 262 0 218 265 0 0 chr20 48917790 48917839 -23236043 - L2 LINE L2 -2 3311 3263 378 0 0 0 chr20 48918030 48918072 -23235810 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 1995 5 5 0 chr20 48918072 48918283 -23235599 - L1PA3 LINE L1 -10 6145 5934 1110 0 0 16 chr20 48918283 48918409 -23235473 + L1PA3 LINE L1 5818 5941 -214 492 354 35 0 chr20 48919630 48919859 -23234023 - MIR SINE MIR -18 244 8 319 306 21 35 chr20 48921530 48921674 -23232208 + L2 LINE L2 3172 3313 0 1511 246 126 7 chr20 48921960 48922411 -23231471 + MLT1D LTR MaLR 1 505 0 895 298 58 36 chr20 48922533 48922705 -23231177 - MLT1J1 LTR MaLR -9 437 270 1751 82 20 39 chr20 48922705 48922960 -23230922 - L1PA13 LINE L1 -2 6161 5912 895 298 58 36 chr20 48922960 48923206 -23230676 - MLT1J1 LTR MaLR -176 270 43 262 340 12 30 chr20 48923476 48923619 -23230263 + MIR SINE MIR 12 151 -57 1001 108 0 74 chr20 48923680 48923856 -23230026 + AluSg/x SINE Alu 150 312 0 1909 143 7 19 chr20 48924152 48924460 -23229422 + AluJo SINE Alu 1 304 -8 318 26 0 0 chr20 48924830 48924869 -23229013 + (CA)n Simple_repeat Simple_repeat 2 40 0 442 231 52 61 chr20 48924919 48925131 -23228751 + L1MEd LINE L1 815 1024 -5095 34 42 0 0 chr20 48925494 48925542 -23228340 + AT_rich Low_complexity Low_complexity 1 48 0 312 307 249 26 chr20 48926853 48927198 -23226684 - L2 LINE L2 -1372 1942 1521 1874 167 20 0 chr20 48927916 48928209 -23225673 - AluJo SINE Alu -13 299 1 234 276 146 0 chr20 48929206 48929329 -23224553 + MIR SINE MIR 109 249 -13 309 361 104 30 chr20 48929445 48930043 -23223839 + L2 LINE L2 2331 2972 -342 860 131 0 41 chr20 48930166 48930311 -23223571 - L1PA11 LINE L1 -2 6172 6034 330 67 0 0 chr20 48930496 48930541 -23223341 + (TG)n Simple_repeat Simple_repeat 2 46 0 1629 184 7 7 chr20 48930592 48930901 -23222981 - AluJb SINE Alu -3 309 1 332 294 0 0 chr20 48931599 48931684 -23222198 - MER5A DNA MER1_type -82 107 23 421 356 11 27 chr20 48932110 48932288 -23221594 - MIR SINE MIR -59 203 29 317 258 79 11 chr20 48932288 48932377 -23221505 - MER5B DNA MER1_type -2 176 82 625 290 81 18 chr20 48932663 48932884 -23220998 - MIR SINE MIR -27 235 1 405 378 15 12 chr20 48933013 48933272 -23220610 + L3 LINE CR1 1317 1576 -1 429 317 72 11 chr20 48934339 48934526 -23219356 - MIR SINE MIR -48 214 13 2284 150 108 3 chr20 48935066 48935453 -23218429 - MSTB1 LTR MaLR -4 428 1 1971 151 3 0 chr20 48935673 48935972 -23217910 + AluSx SINE Alu 1 300 -12 222 312 96 40 chr20 48936311 48936436 -23217446 - L2 LINE L2 -2 3270 3139 274 304 22 85 chr20 48938416 48938640 -23215242 - L2 LINE L2 -985 2329 2120 21 0 0 0 chr20 48938756 48938777 -23215105 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr20 48938864 48938886 -23214996 + AT_rich Low_complexity Low_complexity 1 22 0 233 238 57 48 chr20 48940499 48940604 -23213278 - MIR SINE MIR -56 206 101 183 42 0 0 chr20 48941675 48941699 -23212183 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 744 303 32 5 chr20 48941980 48942201 -23211681 - MIR SINE MIR -14 248 22 292 281 199 0 chr20 48942593 48942739 -23211143 + MIR SINE MIR 8 182 -80 2031 150 6 10 chr20 48943217 48943530 -23210352 - AluSx SINE Alu 0 312 1 21 0 0 0 chr20 48943741 48943762 -23210120 + AT_rich Low_complexity Low_complexity 1 21 0 312 350 16 0 chr20 48943767 48943890 -23209992 - L1MC4a LINE L1 -1935 5873 5749 633 315 98 49 chr20 48944132 48944695 -23209187 - L2 LINE L2 -18 3295 2697 309 263 66 0 chr20 48944719 48944795 -23209087 + L2 LINE L2 3201 3281 -32 350 341 111 0 chr20 48944878 48945004 -23208878 - L2 LINE L2 0 3272 3133 255 31 0 0 chr20 48945110 48945142 -23208740 + (TTTAA)n Simple_repeat Simple_repeat 4 35 0 2083 124 0 10 chr20 48945143 48945433 -23208449 - AluSx SINE Alu -23 289 3 197 333 48 30 chr20 48945531 48945699 -23208183 - L2 LINE L2 -924 2390 2220 426 345 49 10 chr20 48945799 48946002 -23207880 + MIR SINE MIR 11 221 -41 657 219 0 7 chr20 48946172 48946327 -23207555 - L1MA10 LINE L1 -1 6333 6180 253 319 137 33 chr20 48948444 48948626 -23205256 + MIR SINE MIR 29 229 -33 420 265 84 84 chr20 48948631 48948880 -23205002 - MIR SINE MIR 0 262 14 194 250 77 19 chr20 48948849 48948901 -23204981 + L2 LINE L2 3200 3254 -18 * 250 200 0 27 chr20 48949566 48949641 -23204241 + GA-rich Low_complexity Low_complexity 3 75 0 354 329 14 14 chr20 48949956 48950096 -23203786 + MIR SINE MIR 4 143 -119 291 104 0 0 chr20 48950764 48950812 -23203070 + (TC)n Simple_repeat Simple_repeat 1 48 0 235 275 125 0 chr20 48952762 48952842 -23201040 - L2 LINE L2 -1 3271 3182 198 314 210 36 chr20 48952965 48953213 -23200669 + L2 LINE L2 2564 2854 -460 2550 199 54 39 chr20 48953363 48953975 -23199907 + MLT1E3 LTR MaLR 3 623 -1 1293 161 85 0 chr20 48954858 48955106 -23198776 - L1PA16 LINE L1 -4 6162 5894 656 72 2 38 chr20 48955114 48955221 -23198661 + L1MC/D LINE L1 5705 5808 -370 829 330 89 20 chr20 48956045 48956607 -23197275 - L2 LINE L2 -6 3307 2699 345 297 40 0 chr20 48956691 48956792 -23197090 - L2 LINE L2 0 3272 3168 447 212 40 10 chr20 48957259 48957358 -23196524 + MER63 DNA MER1_type 19 746 -90 279 343 50 43 chr20 48958144 48958284 -23195598 - MIR3 SINE MIR -62 146 6 213 275 66 33 chr20 48958262 48958353 -23195529 + L2 LINE L2 3219 3312 -1 * 189 196 0 0 chr20 48958707 48958753 -23195129 + T-rich Low_complexity Low_complexity 1 46 0 246 32 0 0 chr20 48960225 48960256 -23193626 + (TAGA)n Simple_repeat Simple_repeat 4 34 0 272 244 37 22 chr20 48960260 48960395 -23193487 + (TA)n Simple_repeat Simple_repeat 2 138 0 5129 29 20 0 chr20 48961606 48962264 -23191618 - L1P LINE L1 -3053 3093 2423 754 132 0 0 chr20 48962264 48962370 -23191512 - AluSg SINE Alu -202 108 3 519 209 158 28 chr20 48962380 48962595 -23191287 + L1M4 LINE L1 2769 3011 -3135 228 278 0 0 chr20 48963168 48963222 -23190660 + L2 LINE L2 3219 3272 0 1835 158 0 35 chr20 48963614 48963925 -23189957 - AluJb SINE Alu -12 300 1 518 298 105 0 chr20 48964228 48964409 -23189473 + MIR SINE MIR 41 240 -22 1843 220 31 21 chr20 48964652 48965074 -23188808 + MSTB LTR MaLR 1 426 0 836 200 64 4 chr20 48965106 48965341 -23188541 + L1MD3 LINE L1 7744 7992 -3 590 299 99 15 chr20 48966110 48966311 -23187571 - MIR SINE MIR -32 230 13 181 111 0 0 chr20 48966317 48966344 -23187538 + L2 LINE L2 3244 3270 -2 253 218 109 69 chr20 48967076 48967177 -23186705 + MIR SINE MIR 57 161 -101 1869 136 0 34 chr20 48967899 48968213 -23185669 + AluSx SINE Alu 1 304 0 258 268 28 0 chr20 48968216 48968287 -23185595 + (CAA)n Simple_repeat Simple_repeat 3 75 0 231 250 44 0 chr20 48968323 48968391 -23185491 + GA-rich Low_complexity Low_complexity 2 72 0 316 296 133 15 chr20 48968447 48968601 -23185281 - MIR SINE MIR -64 144 16 194 273 102 34 chr20 48968673 48968761 -23185121 + L2 LINE L2 398 491 -2823 189 0 0 0 chr20 48968874 48968895 -23184987 + (T)n Simple_repeat Simple_repeat 1 21 0 195 42 0 0 chr20 48968905 48968929 -23184953 + (TTTC)n Simple_repeat Simple_repeat 2 25 0 541 287 10 35 chr20 48969394 48969596 -23184286 - LTR33 LTR ERVL -2 519 323 349 361 0 0 chr20 48969731 48969864 -23184018 - LTR33 LTR ERVL -385 136 4 194 376 113 15 chr20 48970541 48970674 -23183208 + L2 LINE L2 3127 3272 0 367 336 0 8 chr20 48971167 48971295 -23182587 - MIR SINE MIR -62 146 20 1142 182 49 7 chr20 48972504 48972790 -23181092 + MER33 DNA MER1_type 27 324 0 198 118 0 0 chr20 48972855 48972889 -23180993 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 186 321 57 19 chr20 48972900 48972953 -23180929 - L2 LINE L2 -25 3247 3193 185 128 0 26 chr20 48972998 48973037 -23180845 + (CA)n Simple_repeat Simple_repeat 1 38 0 547 250 140 23 chr20 48973714 48974188 -23179694 - LTR50 LTR ERVL -99 696 55 401 276 0 9 chr20 48974397 48974513 -23179369 - MER103 DNA DNA -48 118 4 201 406 19 9 chr20 48974774 48974880 -23179002 + L2 LINE L2 3192 3298 -15 1348 212 16 0 chr20 48974976 48975158 -23178724 - MER33 DNA MER1_type -2261 324 133 2293 98 3 0 chr20 48975158 48975455 -23178427 - AluSg SINE Alu -12 298 1 1348 212 16 0 chr20 48975455 48975588 -23178294 - MER33 DNA MER1_type -2452 133 4 2221 118 3 3 chr20 48975632 48975928 -23177954 + AluSc SINE Alu 1 296 -13 905 364 15 13 chr20 48976163 48976619 -23177263 + L1M3b LINE L1 1217 1673 -5823 3841 241 57 12 chr20 48976719 48978993 -23174889 + L1M3b LINE L1 1969 4350 -3215 1772 181 3 48 chr20 48979150 48979503 -23174379 - MER1B DNA MER1_type 0 337 1 226 178 10 168 chr20 48979915 48980016 -23173866 + L2 LINE L2 3188 3272 0 1856 142 3 7 chr20 48981934 48982242 -23171640 + AluSx SINE Alu 1 307 0 223 282 130 69 chr20 48983569 48983700 -23170182 - MIR3 SINE MIR -67 141 3 1242 33 0 0 chr20 48984091 48984242 -23169640 - L1PA2 LINE L1 -1900 4246 4096 9726 25 0 0 chr20 48984242 48986157 -23167725 + L1PA2 LINE L1 4236 6150 -5 379 319 0 0 chr20 48986931 48987044 -23166838 + MER117 DNA MER1_type 85 197 0 303 188 32 204 chr20 48987044 48987230 -23166652 - MIR3 SINE MIR -48 160 7 2178 106 40 7 chr20 48987953 48988256 -23165626 - AluSq SINE Alu 0 313 1 297 280 173 27 chr20 48988663 48988813 -23165069 + MIR SINE MIR 46 217 -45 206 318 0 0 chr20 48989215 48989278 -23164604 + G-rich Low_complexity Low_complexity 6 68 0 311 301 51 64 chr20 48989991 48990147 -23163735 - MIR SINE MIR -94 168 15 759 260 49 77 chr20 48990529 48990960 -23162922 + L1MCc LINE L1 50 468 -5955 1556 163 32 73 chr20 48991036 48991405 -23162477 - MLT1B LTR MaLR -10 380 27 4271 196 79 48 chr20 48991419 48991661 -23162221 - L1MC3 LINE L1 -662 7123 6890 239 53 0 26 chr20 48991661 48991699 -23162183 + (TTTG)n Simple_repeat Simple_repeat 3 39 0 4271 196 79 48 chr20 48991699 48992671 -23161211 - L1MC3 LINE L1 -895 6890 5871 1497 216 17 72 chr20 48992777 48993194 -23160688 + MLT1C-int LTR MaLR 963 1356 -15 1376 244 25 23 chr20 48993221 48993652 -23160230 + MLT1C LTR MaLR 34 465 -2 1103 254 40 27 chr20 48993654 48994024 -23159858 - L1M4 LINE L1 -1840 4306 3932 24 0 0 0 chr20 48994050 48994074 -23159808 + AT_rich Low_complexity Low_complexity 1 24 0 1304 274 40 12 chr20 48994082 48994746 -23159136 + L1ME LINE L1 3136 3819 -2327 3200 254 63 16 chr20 48994919 48996437 -23157445 + L1ME LINE L1 4056 5632 -534 1832 167 63 61 chr20 48996458 48996884 -23156998 - MSTA LTR MaLR -1 427 1 8284 174 35 9 chr20 48996884 48998470 -23155412 - MSTA-int LTR MaLR 0 1651 25 608 306 84 10 chr20 48998829 48999126 -23154756 + MLT1J1 LTR MaLR 4 322 -124 3680 109 0 8 chr20 48999324 48999839 -23154043 - MER9 LTR ERVK 0 511 1 2039 74 36 0 chr20 48999839 49000124 -23153758 - HERVK9 LTR ERVK 0 7055 5635 14612 70 2 0 chr20 49000207 49002128 -23151754 - HERVK9 LTR ERVK -282 5634 3711 19914 65 16 24 chr20 49002128 49004068 -23149814 - HERVK9 LTR ERVK -3130 2786 817 185 228 0 88 chr20 49004068 49004125 -23149757 - MER5B DNA MER1_type -69 109 58 19914 65 16 24 chr20 49004125 49004936 -23148946 - HERVK9 LTR ERVK -5099 817 1 3679 96 0 19 chr20 49004936 49005457 -23148425 - MER9 LTR ERVK 0 511 1 263 330 19 0 chr20 49005912 49006018 -23147864 - MIR SINE MIR -13 249 142 2156 87 6 69 chr20 49006102 49006434 -23147448 - AluY SINE Alu 0 311 1 267 273 0 0 chr20 49006814 49006880 -23147002 - MIR SINE MIR -25 237 172 1059 186 11 6 chr20 49006888 49007071 -23146811 - MER5A DNA MER1_type -5 184 1 1661 197 77 22 chr20 49007133 49007549 -23146333 - MLT1C LTR MaLR -2 465 27 319 296 0 12 chr20 49007562 49007643 -23146239 - MIR SINE MIR -170 92 13 616 252 26 10 chr20 49008668 49008879 -23145003 + L1MD3 LINE L1 6137 7976 -19 182 259 37 62 chr20 49009912 49009993 -23143889 + L3 LINE CR1 1426 1504 -73 2133 122 10 7 chr20 49010085 49010381 -23143501 - AluSx SINE Alu -15 297 1 359 279 67 30 chr20 49010435 49010600 -23143282 - L2 LINE L2 -49 3264 3094 250 290 86 37 chr20 49011562 49011724 -23142158 - MARNA DNA Mariner -392 194 25 54 29 0 0 chr20 49011802 49011870 -23142012 + AT_rich Low_complexity Low_complexity 1 68 0 192 77 0 0 chr20 49012046 49012072 -23141810 + (CAA)n Simple_repeat Simple_repeat 2 27 0 370 326 28 39 chr20 49012929 49013107 -23140775 + MER5B DNA MER1_type 2 177 -1 787 276 78 8 chr20 49013393 49013766 -23140116 + Charlie4a DNA MER1_type 40 438 -70 476 242 75 0 chr20 49013766 49013886 -23139996 + L1ME2 LINE L1 5432 5560 -604 5826 103 45 1 chr20 49013887 49014891 -23138991 + L1MA1 LINE L1 5155 6201 -101 1133 237 27 35 chr20 49014920 49015258 -23138624 + L1ME2 LINE L1 5549 5883 -281 591 243 45 5 chr20 49015323 49015525 -23138357 - L1ME2 LINE L1 -278 5886 5677 897 257 83 57 chr20 49016589 49017083 -23136799 - MLT1J LTR MaLR -2 509 3 946 9 0 9 chr20 49017351 49017466 -23136416 - AluYa5/8 SINE Alu 0 310 197 216 0 0 0 chr20 49018196 49018220 -23135662 + (CTA)n Simple_repeat Simple_repeat 1 24 0 226 286 100 113 chr20 49018371 49018741 -23135141 + L3 LINE CR1 1117 1481 -96 1224 327 47 24 chr20 49018781 49019498 -23134384 + L2 LINE L2 2577 3313 0 185 281 263 9 chr20 49020701 49020815 -23133067 - L2 LINE L2 -299 2973 2831 195 318 106 20 chr20 49020992 49021143 -23132739 - L2 LINE L2 -925 2389 2226 185 290 152 65 chr20 49022297 49022528 -23131354 + L2 LINE L2 2809 3059 -213 202 339 54 18 chr20 49022615 49022671 -23131211 + L2 LINE L2 3127 3184 -88 1592 184 35 17 chr20 49022725 49022889 -23130993 - AluJo SINE Alu -19 293 120 423 0 0 0 chr20 49022889 49022936 -23130946 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 1592 184 35 17 chr20 49022936 49023059 -23130823 - AluJo SINE Alu -192 120 1 367 181 0 21 chr20 49023377 49023471 -23130411 + C-rich Low_complexity Low_complexity 2 93 0 213 115 327 0 chr20 49023609 49023661 -23130221 - MER5A DNA MER1_type -77 112 44 205 170 19 75 chr20 49024627 49024680 -23129202 - L2 LINE L2 -3 3310 3261 397 341 119 37 chr20 49024717 49025069 -23128813 - L3 LINE CR1 -937 640 260 21 36 0 0 chr20 49025517 49025545 -23128337 + AT_rich Low_complexity Low_complexity 1 28 0 219 249 103 103 chr20 49026342 49026527 -23127355 + L2 LINE L2 1533 1717 -1597 443 200 20 30 chr20 49026533 49026633 -23127249 + MER5B DNA MER1_type 75 173 -5 21 0 0 0 chr20 49028727 49028748 -23125134 + AT_rich Low_complexity Low_complexity 1 21 0 2318 115 0 3 chr20 49028889 49029194 -23124688 + AluSq SINE Alu 1 304 -9 22 0 0 0 chr20 49029347 49029369 -23124513 + AT_rich Low_complexity Low_complexity 1 22 0 657 249 68 27 chr20 49029383 49029721 -23124161 - L1MC5 LINE L1 -76 7885 7534 1778 198 12 32 chr20 49029736 49030145 -23123737 - L1MA10 LINE L1 -13 6321 5921 243 292 15 0 chr20 49030186 49030251 -23123631 + CT-rich Low_complexity Low_complexity 6 71 0 228 254 167 32 chr20 49030510 49030636 -23123246 + MIR SINE MIR 67 209 -53 2263 78 0 0 chr20 49031013 49031320 -23122562 + AluSc SINE Alu 1 307 0 259 327 44 44 chr20 49031331 49031490 -23122392 - L2 LINE L2 -182 3090 2932 195 42 0 0 chr20 49032275 49032299 -23121583 + (TTTG)n Simple_repeat Simple_repeat 3 26 0 600 72 0 0 chr20 49032299 49032382 -23121500 + L1PA4 LINE L1 5885 5967 -188 339 151 47 23 chr20 49032382 49032468 -23121414 + MER103 DNA DNA 48 135 -31 279 93 0 0 chr20 49033020 49033063 -23120819 + (CA)n Simple_repeat Simple_repeat 2 44 0 459 108 0 27 chr20 49033505 49033579 -23120303 + MER3 DNA MER1_type 6 77 -132 356 301 28 28 chr20 49033655 49033798 -23120084 + MIR SINE MIR 114 256 -6 59 46 0 0 chr20 49035068 49035155 -23118727 + AT_rich Low_complexity Low_complexity 1 87 0 259 276 4 39 chr20 49035526 49035630 -23118252 - MIR SINE MIR -60 148 88 287 130 14 27 chr20 49035652 49035724 -23118158 + Alu SINE Alu 1 38 -263 328 309 66 51 chr20 49035749 49035840 -23118042 - L1ME LINE L1 -375 5746 5658 2014 181 80 11 chr20 49035840 49036276 -23117606 + MLT1C LTR MaLR 1 466 -1 328 309 66 51 chr20 49036276 49036579 -23117303 - L1ME LINE L1 -463 5658 5346 5533 228 64 70 chr20 49036751 49039518 -23114364 - L1MD1 LINE L1 -268 5974 3070 814 233 23 11 chr20 49039518 49039694 -23114188 - FRAM SINE Alu -6 170 1 5533 228 64 70 chr20 49039694 49040431 -23113451 - L1MD1 LINE L1 -3172 3070 2330 304 404 37 0 chr20 49040981 49041090 -23112792 + L2 LINE L2 3134 3246 -26 471 282 184 0 chr20 49041181 49041344 -23112538 + MIR SINE MIR 3 195 -67 358 324 139 23 chr20 49041381 49041640 -23112242 + L2 LINE L2 3000 3288 -25 183 100 0 0 chr20 49041661 49041691 -23112191 + (TGAA)n Simple_repeat Simple_repeat 3 32 0 856 181 12 6 chr20 49041810 49041976 -23111906 + MER58B DNA MER1_type 174 340 -1 608 205 180 6 chr20 49041985 49042146 -23111736 - MER5A DNA MER1_type 0 189 1 563 328 17 0 chr20 49042579 49042753 -23111129 - MIR SINE MIR -80 182 6 890 294 46 11 chr20 49043015 49043362 -23110520 + LTR16A LTR ERVL 87 445 -5 338 273 0 26 chr20 49044105 49044182 -23109700 - MIR SINE MIR -174 88 14 192 176 0 0 chr20 49044190 49044224 -23109658 - L2 LINE L2 -8 3305 3272 29 60 0 0 chr20 49044245 49044295 -23109587 + AT_rich Low_complexity Low_complexity 1 50 0 2334 115 0 0 chr20 49044581 49044886 -23108996 + AluSc SINE Alu 1 305 -4 240 200 100 0 chr20 49045357 49045427 -23108455 - MIR SINE MIR -20 242 166 212 187 0 0 chr20 49045488 49045538 -23108344 - MIR SINE MIR -61 147 104 2512 114 11 19 chr20 49046165 49046543 -23107339 + THE1C LTR MaLR 1 375 0 285 269 84 17 chr20 49047261 49047380 -23106502 - MIR SINE MIR -107 155 29 273 330 0 0 chr20 49048314 49048402 -23105480 - MIR SINE MIR -122 140 53 1249 178 163 31 chr20 49048430 49048688 -23105194 + AluJo SINE Alu 2 293 -9 196 326 87 14 chr20 49048870 49049008 -23104874 - MIR3 SINE MIR -24 184 37 236 268 0 0 chr20 49049229 49049285 -23104597 + L2 LINE L2 3217 3272 0 220 299 11 11 chr20 49049766 49049853 -23104029 + (TATATG)n Simple_repeat Simple_repeat 4 90 0 786 318 42 65 chr20 49049932 49050407 -23103475 + LTR16B LTR ERVL 1 464 0 471 225 96 45 chr20 49052177 49052355 -23101527 - MIR SINE MIR -19 243 57 336 191 60 12 chr20 49053189 49053273 -23100609 - MIR SINE MIR -77 185 98 524 139 0 0 chr20 49053421 49053500 -23100382 - MADE1 DNA Mariner -1 79 1 783 211 111 58 chr20 49053520 49053728 -23100154 - MER20 DNA MER1_type 0 219 1 399 21 0 0 chr20 49053830 49053878 -23100004 + (A)n Simple_repeat Simple_repeat 1 48 0 462 252 52 7 chr20 49054682 49054817 -23099065 - MIR SINE MIR -83 179 39 873 265 40 0 chr20 49055175 49055398 -23098484 - MIR SINE MIR -21 241 10 24 32 0 0 chr20 49055585 49055616 -23098266 + AT_rich Low_complexity Low_complexity 1 31 0 1737 166 79 18 chr20 49055969 49056312 -23097570 + THE1C LTR MaLR 1 364 -11 375 282 0 0 chr20 49056594 49056697 -23097185 - MIR SINE MIR 0 262 160 3456 129 143 133 chr20 49056812 49057174 -23096708 + L1MC3 LINE L1 6759 7116 -669 227 280 43 11 chr20 49057174 49057267 -23096615 + MLT1F1 LTR MaLR 35 130 -437 3456 129 143 133 chr20 49057267 49057829 -23096053 + L1MC3 LINE L1 7116 7785 0 2242 205 71 80 chr20 49057872 49058705 -23095177 + Zaphod DNA AcHobo 166 990 -3041 1575 189 31 48 chr20 49058703 49058980 -23094902 + Zaphod DNA AcHobo 3595 3864 -167 * 2120 113 0 35 chr20 49058980 49059298 -23094584 - AluSc SINE Alu -2 307 1 1575 189 31 48 chr20 49059298 49059437 -23094445 + Zaphod DNA AcHobo 3864 4004 -27 249 36 0 0 chr20 49059486 49059514 -23094368 - MER21B LTR ERV1 -597 266 239 3741 212 52 16 chr20 49061146 49061938 -23091944 - MER21B LTR ERV1 -1 862 43 336 271 0 0 chr20 49061942 49062012 -23091870 - MER21B LTR ERV1 -775 88 19 * 360 236 38 28 chr20 49062009 49062115 -23091767 - MER21B LTR ERV1 -756 107 1 415 324 76 0 chr20 49062454 49062599 -23091283 + MLT1F1 LTR MaLR 3 158 -435 * 1133 251 48 14 chr20 49062595 49062890 -23090992 + MLT1F1 LTR MaLR 263 567 0 220 368 70 10 chr20 49062942 49063143 -23090739 + MIR SINE MIR 1 213 -49 741 41 41 8 chr20 49063991 49064114 -23089768 + (TAGA)n Simple_repeat Simple_repeat 2 128 0 378 313 180 0 chr20 49064268 49064485 -23089397 - L3 LINE CR1 -250 1327 1072 1057 243 19 13 chr20 49065677 49066083 -23087799 + MLT1B LTR MaLR 3 390 0 381 284 42 72 chr20 49066609 49066873 -23087009 + L2 LINE L2 3020 3275 -38 327 189 0 0 chr20 49066890 49066912 -23086970 + GA-rich Low_complexity Low_complexity 2 23 -73 219 103 0 0 chr20 49066912 49066951 -23086931 + (CATA)n Simple_repeat Simple_repeat 2 40 0 327 189 0 0 chr20 49066951 49067023 -23086859 + GA-rich Low_complexity Low_complexity 22 96 0 206 361 14 0 chr20 49067052 49067124 -23086758 - L2 LINE L2 -75 3197 3125 245 354 102 19 chr20 49067584 49067799 -23086083 - MIR SINE MIR -14 248 16 291 263 12 0 chr20 49067799 49067879 -23086003 - MIR SINE MIR -19 243 163 270 287 78 6 chr20 49068146 49068313 -23085569 - L1ME4a LINE L1 -7 6114 5936 186 133 0 0 chr20 49068980 49069010 -23084872 + (TTTC)n Simple_repeat Simple_repeat 1 30 0 2173 92 0 0 chr20 49069015 49069287 -23084595 - AluSq SINE Alu -12 301 30 1300 159 130 25 chr20 49069332 49069608 -23084274 + AluJo SINE Alu 1 305 -7 24 32 0 0 chr20 49069640 49069671 -23084211 + AT_rich Low_complexity Low_complexity 1 31 0 26 50 0 0 chr20 49069716 49069756 -23084126 + AT_rich Low_complexity Low_complexity 1 40 0 302 0 26 0 chr20 49070541 49070579 -23083303 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 1614 107 0 13 chr20 49070646 49070871 -23083011 + AluSp SINE Alu 85 306 -7 1107 123 0 0 chr20 49070871 49071026 -23082856 - LTR8A LTR ERV1 -572 155 1 990 266 44 52 chr20 49073004 49073388 -23080494 - L1ME3A LINE L1 -48 6122 5742 985 207 0 6 chr20 49073417 49073591 -23080291 - FAM SINE Alu -2 173 1 696 270 125 36 chr20 49074977 49075314 -23078568 - L2 LINE L2 -1 3312 2946 207 271 146 0 chr20 49076036 49076132 -23077750 - L2 LINE L2 -300 2972 2863 363 279 14 61 chr20 49076161 49076308 -23077574 + L2 LINE L2 3133 3272 0 275 298 79 54 chr20 49076741 49077106 -23076776 + L1ME LINE L1 5414 5791 -330 180 0 0 0 chr20 49077106 49077126 -23076756 + (TA)n Simple_repeat Simple_repeat 1 20 0 275 298 79 54 chr20 49077126 49077166 -23076716 + L1ME LINE L1 5791 5829 -292 1741 127 33 0 chr20 49077547 49077823 -23076059 - L1PB3 LINE L1 0 6154 5870 3554 170 91 27 chr20 49077979 49078762 -23075120 + LTR1B LTR ERV1 8 819 -7 448 309 7 0 chr20 49078822 49078958 -23074924 - MIR SINE MIR -19 243 107 244 250 19 56 chr20 49079639 49079747 -23074135 - L2 LINE L2 -82 3231 3128 392 327 67 26 chr20 49079989 49080258 -23073624 - L2 LINE L2 -561 2753 2474 237 293 30 61 chr20 49081370 49081469 -23072413 - MER5A DNA MER1_type -45 144 49 1763 174 67 82 chr20 49081769 49082234 -23071648 + MER31B LTR ERV1 9 466 0 614 286 54 21 chr20 49082453 49082694 -23071188 + MIR SINE MIR 12 260 -2 29 0 0 0 chr20 49082748 49082777 -23071105 + AT_rich Low_complexity Low_complexity 1 29 0 405 70 0 0 chr20 49082909 49082966 -23070916 + (TGAA)n Simple_repeat Simple_repeat 3 59 0 1914 148 4 4 chr20 49083548 49083848 -23070034 + AluSx SINE Alu 6 305 0 724 186 175 11 chr20 49084060 49084243 -23069639 - MER58A DNA MER1_type 0 224 12 1685 173 0 30 chr20 49084428 49084729 -23069153 + AluJo SINE Alu 13 304 -8 478 294 91 29 chr20 49084848 49085222 -23068660 - L1ME4a LINE L1 -206 5915 5519 301 220 0 0 chr20 49085704 49085763 -23068119 + MER6 DNA MER2_type -65 4294967289 -151 2090 128 3 0 chr20 49085765 49086055 -23067827 - AluSp SINE Alu -22 291 1 2122 183 56 3 chr20 49086056 49086433 -23067449 - MER6 DNA MER2_type -468 397 1 1862 195 33 26 chr20 49086433 49086857 -23067025 - MLT1C LTR MaLR -32 435 9 182 360 122 7 chr20 49087086 49087233 -23066649 + L2 LINE L2 3109 3272 0 24 0 0 0 chr20 49088022 49088046 -23065836 + AT_rich Low_complexity Low_complexity 1 24 0 763 186 14 7 chr20 49088374 49088519 -23065363 + MER5A DNA MER1_type 2 147 -42 189 292 28 14 chr20 49089409 49089481 -23064401 - L2 LINE L2 -9 3263 3191 229 245 143 61 chr20 49089716 49089814 -23064068 + MIR SINE MIR 48 153 -109 851 217 75 101 chr20 49089895 49090241 -23063641 - LTR27 LTR ERV1 0 636 300 307 181 14 14 chr20 49090208 49090280 -23063602 - LTR1 LTR ERV1 -593 192 121 * 817 224 6 22 chr20 49090306 49090485 -23063397 - LTR28 LTR ERV1 -844 176 1 190 276 71 63 chr20 49090956 49091083 -23062799 + MIR SINE MIR 42 169 -93 2122 111 0 0 chr20 49091133 49091580 -23062302 + AluSc SINE Alu 1 447 0 456 271 0 0 chr20 49093151 49093247 -23060635 + MER58A DNA MER1_type 1 96 -11 275 280 34 103 chr20 49093465 49093640 -23060242 - L3 LINE CR1 -195 1382 1220 258 340 168 19 chr20 49094144 49094406 -23059476 + L2 LINE L2 2971 3271 -1 388 234 200 14 chr20 49094841 49094986 -23058896 + MER5B DNA MER1_type 7 178 0 451 292 90 6 chr20 49095177 49095355 -23058527 + MIR SINE MIR 60 252 -10 212 258 16 0 chr20 49095498 49095560 -23058322 + (TGAA)n Simple_repeat Simple_repeat 2 64 0 244 331 38 45 chr20 49095653 49095786 -23058096 + MER5B DNA MER1_type 47 178 0 182 410 79 29 chr20 49096867 49096978 -23056904 + L2 LINE L2 3122 3243 -29 1542 234 11 11 chr20 49096978 49097341 -23056541 - MLT1A1 LTR MaLR -2 363 1 182 410 79 29 chr20 49097341 49097368 -23056514 + L2 LINE L2 3243 3267 -5 21 57 0 0 chr20 49097376 49097411 -23056471 + AT_rich Low_complexity Low_complexity 1 35 0 203 261 14 43 chr20 49098346 49098415 -23055467 - L2 LINE L2 -2 3270 3204 240 243 37 140 chr20 49098765 49098901 -23054981 + MIR SINE MIR 79 200 -62 21 71 0 0 chr20 49099641 49099683 -23054199 + AT_rich Low_complexity Low_complexity 1 42 0 28 48 0 0 chr20 49099956 49099998 -23053884 + AT_rich Low_complexity Low_complexity 1 42 0 347 343 7 0 chr20 49100544 49100681 -23053201 - LTR16B LTR ERVL -87 377 240 1249 337 25 31 chr20 49100772 49101461 -23052421 - ERVL LTR ERVL -1252 4512 3826 1751 174 20 64 chr20 49101461 49101868 -23052014 + MLT1B LTR MaLR 1 389 -1 1249 337 25 31 chr20 49101868 49101922 -23051960 - ERVL LTR ERVL -1938 3826 3773 220 317 70 54 chr20 49102938 49103124 -23050758 - L2 LINE L2 -25 3288 3100 1881 132 58 28 chr20 49103310 49103674 -23050208 - THE1C LTR MaLR 0 375 1 1569 151 62 39 chr20 49103791 49104096 -23049786 - AluJb SINE Alu 0 312 1 1580 248 42 0 chr20 49104126 49104577 -23049305 - L1ME1 LINE L1 -280 5955 5486 2199 114 0 22 chr20 49104578 49104895 -23048987 - AluSg SINE Alu 0 310 1 180 219 0 0 chr20 49104959 49105000 -23048882 + GA-rich Low_complexity Low_complexity 2 42 0 521 205 18 0 chr20 49105013 49105125 -23048757 + L1M LINE L1 5296 5409 -757 508 238 37 23 chr20 49105123 49105337 -23048545 - L1ME1 LINE L1 -912 5303 5087 * 1682 245 57 4 chr20 49105337 49105847 -23048035 - L1ME1 LINE L1 -1814 4401 3865 309 169 0 0 chr20 49105853 49105912 -23047970 + (TG)n Simple_repeat Simple_repeat 2 60 0 202 191 45 22 chr20 49105936 49106025 -23047857 + (TA)n Simple_repeat Simple_repeat 2 92 0 639 224 26 0 chr20 49106066 49106218 -23047664 - L1ME1 LINE L1 -2384 3831 3676 2601 246 112 16 chr20 49106230 49107145 -23046737 - L1ME1 LINE L1 -5162 1234 233 414 267 30 0 chr20 49107153 49107284 -23046598 - L1MEc LINE L1 -5640 756 622 308 275 84 34 chr20 49107287 49107465 -23046417 - L1ME1 LINE L1 -6170 226 40 572 269 26 55 chr20 49107498 49107806 -23046076 - MER113 DNA MER1_type? -222 299 1 967 178 16 105 chr20 49108000 49108315 -23045567 + MER33 DNA MER1_type 1 287 -37 767 187 0 0 chr20 49108316 49108439 -23045443 + FLAM_C SINE Alu 3 125 -8 2091 146 0 0 chr20 49108452 49108761 -23045121 + AluSx SINE Alu 1 309 -3 1016 203 141 8 chr20 49108785 49108897 -23044985 + AluJo SINE Alu 3 99 -213 465 34 0 0 chr20 49108897 49108956 -23044926 + (TC)n Simple_repeat Simple_repeat 2 60 0 456 104 0 0 chr20 49108955 49109022 -23044860 + (TA)n Simple_repeat Simple_repeat 2 68 0 * 1016 203 141 8 chr20 49108956 49109150 -23044732 + AluJo SINE Alu 99 275 -37 316 326 28 7 chr20 49109427 49109568 -23044314 + MIR SINE MIR 117 260 -2 198 0 0 0 chr20 49109813 49109835 -23044047 + (TG)n Simple_repeat Simple_repeat 2 23 0 221 289 44 74 chr20 49110770 49110905 -23042977 - MIR SINE MIR -80 182 52 241 229 72 36 chr20 49110937 49111020 -23042862 - L2 LINE L2 -4 3309 3224 494 234 89 0 chr20 49111026 49111184 -23042698 + L1ME LINE L1 5558 5729 -435 1789 236 4 21 chr20 49111215 49111685 -23042197 + L1ME2 LINE L1 5693 6154 -10 227 291 0 0 chr20 49111727 49111806 -23042076 + L1MC4 LINE L1 7826 7904 -138 219 286 0 0 chr20 49111809 49111858 -23042024 + (TGGA)n Simple_repeat Simple_repeat 2 50 0 447 320 55 71 chr20 49111998 49112436 -23041446 - L2 LINE L2 -78 3235 2805 488 268 9 114 chr20 49112537 49112765 -23041117 - MIR SINE MIR 0 262 59 275 332 166 59 chr20 49112785 49113158 -23040724 + L3 LINE CR1 1158 1570 -7 225 370 72 22 chr20 49113577 49113715 -23040167 - MIR SINE MIR -117 145 1 469 309 44 17 chr20 49114619 49114800 -23039082 + MER117 DNA MER1_type 12 197 0 9881 109 7 1 chr20 49115405 49117647 -23036235 - L1PA8A LINE L1 -1 6130 3883 215 295 83 41 chr20 49118497 49118656 -23035226 + MIR SINE MIR 20 225 -37 805 235 36 36 chr20 49119001 49119248 -23034634 + MLT1K LTR MaLR 332 578 -10 239 319 56 38 chr20 49119358 49119518 -23034364 + MIR SINE MIR 89 251 -11 203 304 72 56 chr20 49119763 49119888 -23033994 - MER5A DNA MER1_type 0 189 63 980 295 71 6 chr20 49120259 49120598 -23033284 + LTR16A LTR ERVL 85 445 -5 549 269 95 16 chr20 49121337 49121579 -23032303 + LTR16C LTR ERVL 231 491 0 414 162 50 30 chr20 49122360 49122459 -23031423 + L1M3 LINE L1 5578 5678 -505 1062 296 50 17 chr20 49123268 49123372 -23030510 - LTR16C LTR ERVL -3 488 389 2143 102 68 34 chr20 49123372 49123724 -23030158 + THE1B LTR MaLR 1 364 0 1062 296 50 17 chr20 49123724 49123980 -23029902 - LTR16C LTR ERVL -102 389 116 984 210 4 63 chr20 49123980 49124160 -23029722 + L1MDa LINE L1 35 197 -6343 2377 83 0 0 chr20 49124160 49124460 -23029422 + AluY SINE Alu 1 300 -11 984 210 4 63 chr20 49124460 49124531 -23029351 + L1MDa LINE L1 197 271 -6269 6917 233 50 33 chr20 49124550 49126181 -23027701 + L1MDa LINE L1 1131 2734 -3806 4601 38 0 2 chr20 49126181 49126733 -23027149 - L1PA4 LINE L1 -8 6147 5597 6917 233 50 33 chr20 49126733 49127058 -23026824 + L1MDa LINE L1 2734 3052 -3488 2296 159 61 2 chr20 49127058 49127453 -23026429 + MER47B DNA MER2_type 1 418 0 6917 233 50 33 chr20 49127453 49129561 -23024321 + L1MDa LINE L1 3052 5253 -1287 2158 225 72 22 chr20 49129558 49130225 -23023657 - L1MD2 LINE L1 0 6359 5660 * 2393 96 3 0 chr20 49130878 49131190 -23022692 + AluSp SINE Alu 1 313 0 4042 154 77 42 chr20 49131590 49132537 -23021345 + L1MB3 LINE L1 5589 6566 -11 4810 99 0 1 chr20 49132925 49133593 -23020289 + L1PA13 LINE L1 5478 6144 -19 22 0 0 0 chr20 49135098 49135120 -23018762 + AT_rich Low_complexity Low_complexity 1 22 0 192 77 0 0 chr20 49135647 49135673 -23018209 + (TCC)n Simple_repeat Simple_repeat 2 27 0 658 283 109 39 chr20 49136007 49136067 -23017815 + L2 LINE L2 2558 2612 -701 1818 152 14 14 chr20 49136067 49136357 -23017525 - AluSg SINE Alu -20 290 1 658 283 109 39 chr20 49136357 49136736 -23017146 + L2 LINE L2 2612 3026 -287 199 322 191 0 chr20 49137067 49137182 -23016700 + L2 LINE L2 3136 3272 0 368 306 211 6 chr20 49137824 49138004 -23015878 + MIR SINE MIR 37 253 -9 198 336 96 0 chr20 49138964 49139068 -23014814 - L2 LINE L2 -700 2614 2501 321 26 0 0 chr20 49139336 49139374 -23014508 + (A)n Simple_repeat Simple_repeat 1 38 0 385 219 37 24 chr20 49140268 49140350 -23013532 + L2 LINE L2 3172 3254 -18 229 350 10 0 chr20 49140355 49140458 -23013424 + MIR SINE MIR 131 234 -28 1081 233 5 0 chr20 49140494 49140717 -23013165 - MER58A DNA MER1_type 0 224 1 300 314 49 91 chr20 49141171 49141435 -23012447 - L2 LINE L2 -2 3270 3018 328 251 121 0 chr20 49142148 49142284 -23011598 - MIR SINE MIR -27 235 76 553 287 44 22 chr20 49143552 49143733 -23010149 - MIR SINE MIR -19 243 59 420 37 0 0 chr20 49143738 49143792 -23010090 + (TA)n Simple_repeat Simple_repeat 2 55 0 1983 116 4 0 chr20 49143824 49144092 -23009790 - AluSx SINE Alu -43 269 1 2452 54 3 0 chr20 49144386 49144680 -23009202 + AluY SINE Alu 1 295 -16 258 186 0 17 chr20 49144923 49144982 -23008900 + MLT1H LTR MaLR 492 549 0 269 300 11 22 chr20 49145029 49145119 -23008763 - MIR SINE MIR -72 136 48 289 269 48 39 chr20 49145385 49145489 -23008393 - MIR SINE MIR -41 221 117 243 224 26 53 chr20 49145604 49145680 -23008202 - MIR3 SINE MIR -46 162 89 215 266 119 37 chr20 49145951 49146060 -23007822 + MIR SINE MIR 120 237 -25 528 323 51 13 chr20 49146066 49146310 -23007572 - MIR SINE MIR 0 262 13 184 338 0 27 chr20 49147470 49147544 -23006338 - MIR SINE MIR 0 262 191 441 339 68 70 chr20 49147655 49148124 -23005758 - L2 LINE L2 -1 3271 2804 920 256 12 16 chr20 49148703 49148949 -23004933 - MIR SINE MIR -5 257 13 200 211 0 18 chr20 49149507 49149564 -23004318 + CT-rich Low_complexity Low_complexity 3 58 0 1162 229 9 5 chr20 49149929 49150152 -23003730 - MER58A DNA MER1_type 0 224 1 533 271 71 65 chr20 49150900 49151272 -23002610 + LTR16A1 LTR ERVL 73 427 -30 27 49 0 0 chr20 49152006 49152047 -23001835 + AT_rich Low_complexity Low_complexity 1 41 0 4376 179 24 67 chr20 49152108 49153148 -23000734 - L1MA9 LINE L1 -39 6273 5279 710 240 28 60 chr20 49153306 49153523 -23000359 - MER63A DNA MER1_type 0 210 1 339 302 112 9 chr20 49154180 49154296 -22999586 + MIR SINE MIR 37 164 -98 2317 61 0 0 chr20 49154475 49154754 -22999128 + AluY SINE Alu 1 279 -32 222 37 0 0 chr20 49154754 49154781 -22999101 + (TAAA)n Simple_repeat Simple_repeat 1 27 0 185 191 32 95 chr20 49155196 49155259 -22998623 + MER5B DNA MER1_type 91 149 -29 516 229 44 62 chr20 49155672 49155899 -22997983 - L1ME4a LINE L1 -207 5914 5692 2167 107 7 0 chr20 49155899 49156188 -22997694 + AluSq SINE Alu 23 313 0 1507 44 0 11 chr20 49157613 49157793 -22996089 + L1PA7 LINE L1 5977 6154 0 2158 180 34 102 chr20 49157896 49158050 -22995832 - L1MD3 LINE L1 -19 7976 7813 1769 166 44 93 chr20 49158050 49158502 -22995380 + MSTB1 LTR MaLR 3 432 0 2158 180 34 102 chr20 49158502 49158935 -22994947 - L1MD3 LINE L1 -182 7813 7429 2505 84 0 0 chr20 49159041 49159351 -22994531 - AluY SINE Alu -1 310 1 389 301 52 7 chr20 49159578 49159731 -22994151 + MIR SINE MIR 97 256 -6 496 209 0 0 chr20 49160632 49160718 -22993164 + MLT1E1 LTR MaLR 1 86 -568 * 1664 215 29 81 chr20 49160716 49161172 -22992710 + MLT1E1 LTR MaLR 223 654 0 1818 116 8 0 chr20 49161763 49162014 -22991868 - AluSx SINE Alu 0 312 60 753 289 113 21 chr20 49162041 49162422 -22991460 + L2 LINE L2 2898 3313 0 1095 274 91 29 chr20 49162659 49163067 -22990815 + LTR16A LTR ERVL 18 450 0 3081 294 63 42 chr20 49163067 49164346 -22989536 + HERV16 LTR ERVL 1 1306 -3690 1524 288 34 55 chr20 49164352 49164784 -22989098 + HERV16 LTR ERVL 1517 1924 -3072 2284 92 3 0 chr20 49164784 49165090 -22988792 + AluY SINE Alu 5 311 0 1524 288 34 55 chr20 49165090 49165337 -22988545 + HERV16 LTR ERVL 1924 2175 -2821 330 316 92 15 chr20 49166092 49166288 -22987594 - MIR SINE MIR -39 223 13 1545 179 4 8 chr20 49167101 49167369 -22986513 + MER66B LTR ERV1 1 267 -219 328 265 113 26 chr20 49167396 49167547 -22986335 + L1ME3A LINE L1 5674 5837 -333 1058 279 50 9 chr20 49167556 49167897 -22985985 + L1ME3 LINE L1 5784 6138 -24 261 0 0 0 chr20 49168146 49168175 -22985707 + (TG)n Simple_repeat Simple_repeat 2 30 0 246 200 360 0 chr20 49169566 49169666 -22984216 - MIR SINE MIR -8 254 119 407 333 0 7 chr20 49170061 49170199 -22983683 + MIR SINE MIR 121 257 -5 512 307 8 0 chr20 49170250 49170377 -22983505 - MIR SINE MIR -117 145 18 231 163 0 61 chr20 49172685 49172734 -22981148 + MER3 DNA MER1_type 2 47 -162 647 185 206 7 chr20 49172735 49172881 -22981001 - MER58C DNA MER1_type -1 214 40 3573 166 53 32 chr20 49172889 49173605 -22980277 + L1MB5 LINE L1 5443 6173 -1 402 161 315 23 chr20 49173680 49173755 -22980127 + MER3 DNA MER1_type 38 90 -119 1889 153 10 0 chr20 49173755 49174043 -22979839 + AluSq SINE Alu 1 291 -22 402 161 315 23 chr20 49174043 49174097 -22979785 + MER3 DNA MER1_type 90 205 -4 482 336 72 56 chr20 49174161 49174853 -22979029 + HAL1b LINE L1 178 802 -546 586 313 114 27 chr20 49175527 49176201 -22977681 + L1M4 LINE L1 2132 2864 -3282 1974 110 0 0 chr20 49176560 49176832 -22977050 - AluSx SINE Alu -7 305 34 2091 127 3 0 chr20 49176913 49177204 -22976678 + AluSx SINE Alu 3 294 -18 255 234 109 0 chr20 49177443 49177507 -22976375 + L2 LINE L2 3242 3312 -1 611 100 0 0 chr20 49178238 49178318 -22975564 - MADE1 DNA Mariner 0 80 1 547 151 0 63 chr20 49178513 49178639 -22975243 + MER96B DNA MER1_type? 192 309 -108 276 316 98 17 chr20 49179167 49179341 -22974541 - MIR SINE MIR -16 246 59 193 291 61 54 chr20 49179340 49179488 -22974394 - L2 LINE L2 -518 2796 2648 * 436 287 14 62 chr20 49179627 49179836 -22974046 + MIR SINE MIR 8 206 -56 312 326 90 30 chr20 49180555 49180788 -22973094 - L2 LINE L2 0 3313 3067 1018 182 20 98 chr20 49180901 49180932 -22972950 - L1MD3 LINE L1 0 7995 7963 2204 124 0 3 chr20 49180932 49181239 -22972643 - AluSx SINE Alu -6 306 1 1018 182 20 98 chr20 49181239 49181503 -22972379 - L1MD3 LINE L1 -32 7963 7723 1342 236 103 34 chr20 49183310 49183747 -22970135 + MLT1C LTR MaLR 1 467 0 225 241 0 17 chr20 49183792 49183850 -22970032 + (TG)n Simple_repeat Simple_repeat 2 58 0 241 221 52 39 chr20 49184076 49184153 -22969729 - L2 LINE L2 -13 3259 3182 556 273 45 0 chr20 49184390 49184544 -22969338 + LTR16A LTR ERVL 285 445 -5 253 284 74 21 chr20 49185383 49185478 -22968404 + L2 LINE L2 3150 3249 -23 615 285 26 66 chr20 49185933 49186161 -22967721 + MIR SINE MIR 11 229 -33 308 271 0 0 chr20 49186184 49186254 -22967628 - MER96B DNA MER1_type? -105 70 1 436 209 93 0 chr20 49186356 49186442 -22967440 + MER58A DNA MER1_type 1 94 -13 325 274 14 127 chr20 49187594 49187806 -22966076 + MER5A DNA MER1_type 2 189 0 249 150 0 0 chr20 49188477 49188517 -22965365 - MLT2B2 LTR ERVL -4 511 472 662 115 4 59 chr20 49188533 49188817 -22965065 + (TA)n Simple_repeat Simple_repeat 1 268 0 254 167 0 0 chr20 49188851 49188893 -22964989 + MLT2C2 LTR ERVL 420 461 -3 242 217 0 17 chr20 49188930 49188990 -22964892 + L1MC4 LINE L1 6645 6703 -1339 192 68 45 23 chr20 49188992 49189036 -22964846 + (TATAA)n Simple_repeat Simple_repeat 5 49 0 2548 140 15 68 chr20 49189041 49189633 -22964249 - L1M2c LINE L1 -4598 2191 1631 201 39 0 0 chr20 49189633 49189659 -22964223 + (TC)n Simple_repeat Simple_repeat 2 27 0 2416 161 18 43 chr20 49189682 49190123 -22963759 - LTR3 LTR ERVK -2 430 1 282 301 128 0 chr20 49190126 49190259 -22963623 - LTR16A LTR ERVL -197 253 104 2117 174 3 26 chr20 49190363 49190708 -22963174 - MER1B DNA MER1_type 0 337 1 208 356 11 0 chr20 49192249 49192339 -22961543 + MIR SINE MIR 172 262 0 310 232 48 64 chr20 49192846 49192971 -22960911 + L1ME4a LINE L1 5774 5896 -225 751 277 30 17 chr20 49193402 49193633 -22960249 + MIR SINE MIR 19 252 -10 180 0 0 0 chr20 49193640 49193660 -22960222 + (CAT)n Simple_repeat Simple_repeat 2 21 0 2129 174 156 5 chr20 49193826 49194263 -22959619 + MLT1D LTR MaLR 1 503 -2 2701 256 35 25 chr20 49194660 49194967 -22958915 + L1ME1 LINE L1 5391 5693 -641 2210 128 0 0 chr20 49194967 49195272 -22958610 + AluSx SINE Alu 1 305 -7 2701 256 35 25 chr20 49195272 49195741 -22958141 + L1ME1 LINE L1 5693 6334 0 256 229 60 12 chr20 49195748 49195831 -22958051 - MER5A DNA MER1_type -77 112 26 185 222 0 0 chr20 49197012 49197048 -22956834 + L2 LINE L2 3264 3299 -14 378 305 87 59 chr20 49200414 49200873 -22953009 + HAL1b LINE L1 71 542 -806 728 112 0 35 chr20 49201388 49201504 -22952378 - L1MA3 LINE L1 0 6305 6194 422 319 113 4 chr20 49201529 49202015 -22951867 - L1M4 LINE L1 -1497 4649 4111 236 200 17 0 chr20 49202167 49202227 -22951655 + GA-rich Low_complexity Low_complexity 3 63 0 242 247 0 55 chr20 49202227 49202300 -22951582 + G-rich Low_complexity Low_complexity 1 69 0 186 118 0 0 chr20 49202313 49202347 -22951535 + (T)n Simple_repeat Simple_repeat 1 34 0 8233 19 6 0 chr20 49202348 49203451 -22950431 - L1PA3 LINE L1 -1 6154 5050 11037 30 0 0 chr20 49203451 49204733 -22949149 + L1PA3 LINE L1 3759 5040 -1106 335 355 34 28 chr20 49204742 49205149 -22948733 + L2 LINE L2 2632 3035 -237 1961 188 29 5 chr20 49205201 49205578 -22948304 - L1MB5 LINE L1 -1 6173 5788 229 130 0 0 chr20 49205597 49205643 -22948239 + LTR66 LTR ERVL 394 439 -171 848 166 0 7 chr20 49205658 49205803 -22948079 - L1MB5 LINE L1 -388 5792 5649 274 292 83 49 chr20 49205863 49206007 -22947875 + L2 LINE L2 3165 3313 0 270 243 40 34 chr20 49206627 49206775 -22947107 + (TCTCTG)n Simple_repeat Simple_repeat 4 152 0 250 345 111 25 chr20 49207204 49207601 -22946281 - L2 LINE L2 -24 3248 2818 549 246 91 45 chr20 49207686 49207885 -22945997 + MER3 DNA MER1_type 1 208 -1 629 308 70 29 chr20 49208517 49209030 -22944852 + L1ME2 LINE L1 4613 5146 -1000 536 268 86 82 chr20 49209067 49209683 -22944199 + L1ME2 LINE L1 5236 5863 -301 415 280 24 85 chr20 49209860 49210071 -22943811 - MIR SINE MIR 0 262 65 370 327 42 14 chr20 49210858 49211072 -22942810 + MARNA DNA Mariner 341 560 -26 460 226 35 17 chr20 49211254 49211369 -22942513 + L2 LINE L2 3195 3311 -2 207 0 0 0 chr20 49211798 49211821 -22942061 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 300 355 45 0 chr20 49211932 49212042 -22941840 + L2 LINE L2 3157 3271 -1 329 239 92 37 chr20 49212145 49212254 -22941628 + MIR SINE MIR 23 137 -125 649 300 91 9 chr20 49212360 49212580 -22941302 + MIR SINE MIR 13 250 -12 957 211 139 20 chr20 49212740 49213211 -22940671 - MLT1E LTR MaLR -7 586 1 368 274 0 19 chr20 49213211 49213317 -22940565 + L2 LINE L2 3169 3272 0 198 0 0 0 chr20 49213347 49213369 -22940513 + (TG)n Simple_repeat Simple_repeat 2 23 0 22 0 0 0 chr20 49213788 49213810 -22940072 + AT_rich Low_complexity Low_complexity 1 22 0 302 326 50 28 chr20 49215055 49215196 -22938686 - L2 LINE L2 -246 3026 2883 525 234 0 0 chr20 49215199 49215336 -22938546 + (TG)n Simple_repeat Simple_repeat 1 137 0 1203 301 126 52 chr20 49216206 49217428 -22936454 + L2 LINE L2 1204 2516 -798 482 280 71 78 chr20 49218017 49218413 -22935469 - LTR16A LTR ERVL -40 410 18 660 78 33 44 chr20 49218716 49218896 -22934986 + (TCTA)n Simple_repeat Simple_repeat 3 180 0 1157 23 35 11 chr20 49218908 49219082 -22934800 + (TCTA)n Simple_repeat Simple_repeat 1 178 0 887 226 39 34 chr20 49219529 49219733 -22934149 - MER63A DNA MER1_type -5 205 1 664 252 68 24 chr20 49221058 49221264 -22932618 - MIR SINE MIR -1 261 47 351 0 0 0 chr20 49221598 49221637 -22932245 + (CA)n Simple_repeat Simple_repeat 2 40 0 3148 150 37 11 chr20 49222041 49222587 -22931295 - L1MB3 LINE L1 0 6183 5624 2690 39 0 6 chr20 49223254 49223566 -22930316 + AluY SINE Alu 1 310 -1 536 299 94 16 chr20 49225290 49225534 -22928348 - LTR33 LTR ERVL -236 285 23 332 283 42 17 chr20 49225825 49225945 -22927937 - MIR SINE MIR -37 225 103 208 254 0 51 chr20 49226252 49226311 -22927571 + L2 LINE L2 3214 3269 -3 455 323 99 14 chr20 49226507 49226730 -22927152 + MIR SINE MIR 2 243 -19 25 31 0 0 chr20 49227014 49227046 -22926836 + AT_rich Low_complexity Low_complexity 1 32 0 581 275 62 29 chr20 49227159 49227399 -22926483 - L1ME4a LINE L1 -202 5919 5672 342 328 8 8 chr20 49227734 49227853 -22926029 - MIR SINE MIR -141 121 3 692 270 73 39 chr20 49228854 49229328 -22924554 + LTR33 LTR ERVL 4 520 -1 2205 109 10 13 chr20 49229695 49230006 -22923876 - AluSx SINE Alu -2 310 1 352 282 17 0 chr20 49230055 49230082 -22923800 - L1MA4A LINE L1 -3 6300 6274 4508 175 30 12 chr20 49230082 49230969 -22922913 - L1PB4 LINE L1 -14 6142 5244 255 341 159 0 chr20 49231573 49231699 -22922183 + MER117 DNA MER1_type 9 154 -43 328 288 106 8 chr20 49232134 49232266 -22921616 - LTR67 LTR ERVL -2 555 411 669 235 140 53 chr20 49232268 49232690 -22921192 - MLT1C LTR MaLR 0 467 1 2134 172 49 0 chr20 49233340 49233688 -22920194 - MLT1A1 LTR MaLR 0 365 1 405 302 102 68 chr20 49234313 49234343 -22919539 + L2 LINE L2 2738 2766 -547 1534 206 77 75 chr20 49234343 49234809 -22919073 + MLT1C LTR MaLR 1 467 0 405 302 102 68 chr20 49234809 49235179 -22918703 + L2 LINE L2 2766 3165 -148 2044 99 0 14 chr20 49235179 49235463 -22918419 - AluSg1 SINE Alu 0 309 30 405 302 102 68 chr20 49235463 49235617 -22918265 + L2 LINE L2 3165 3312 -1 449 348 64 51 chr20 49235620 49236151 -22917731 - L2 LINE L2 -346 2968 2431 2650 126 45 61 chr20 49237416 49237910 -22915972 - LTR19A LTR ERV1 0 486 1 11543 161 40 55 chr20 49237910 49239698 -22914184 - LTR19A-int LTR ERV1 0 5586 3773 2660 33 18 0 chr20 49239698 49240029 -22913853 - L1P LINE L1 -3053 3093 2757 17564 23 3 0 chr20 49240030 49242743 -22911139 + L1PA4 LINE L1 3438 6152 -3 11543 161 40 55 chr20 49242743 49243936 -22909946 - LTR19A-int LTR ERV1 -1812 3774 2323 887 208 110 13 chr20 49244003 49244239 -22909643 - L1ME1 LINE L1 -5 6161 5903 493 293 75 0 chr20 49244245 49244392 -22909490 - L2 LINE L2 -2106 1208 1051 568 304 37 5 chr20 49244807 49244998 -22908884 + MIR SINE MIR 36 232 -30 339 277 13 1 chr20 49245819 49245904 -22907978 + MER5A DNA MER1_type 89 184 -5 1208 198 0 22 chr20 49245912 49246139 -22907743 + MER58A DNA MER1_type 1 222 -2 253 291 221 0 chr20 49246283 49246369 -22907513 - L2 LINE L2 -7 3306 3202 604 192 158 5 chr20 49246394 49246597 -22907285 - HsTC2 DNA Tc2 -1 1897 1664 337 242 74 11 chr20 49246606 49246701 -22907181 - HsTC2 DNA Tc2 -564 1334 1234 * 606 209 61 27 chr20 49246699 49246847 -22907035 - HsTC2 DNA Tc2 -1744 154 2 2337 100 10 3 chr20 49247189 49247500 -22906382 - AluSq SINE Alu 0 313 1 757 240 129 4 chr20 49247911 49248144 -22905738 - ORSL DNA AcHobo -13 262 1 231 342 0 0 chr20 49248296 49248375 -22905507 - MER5A DNA MER1_type 0 189 111 300 186 0 128 chr20 49249262 49249348 -22904534 + MER21B LTR ERV1 12 86 -777 1134 243 66 18 chr20 49249408 49249741 -22904141 + MER21B LTR ERV1 100 448 -415 939 219 45 42 chr20 49249927 49250214 -22903668 + MER21B LTR ERV1 522 809 -54 468 261 17 0 chr20 49250392 49250511 -22903371 + MER94 DNA DNA 5 125 -9 264 209 0 0 chr20 49250513 49250556 -22903326 - MIR SINE MIR -105 103 61 1993 154 2 50 chr20 49250621 49251023 -22902859 + MLT1B LTR MaLR 1 383 -7 568 280 69 11 chr20 49251811 49251986 -22901896 - MIR SINE MIR -3 259 75 497 276 166 20 chr20 49252119 49252318 -22901564 - MIR SINE MIR -10 252 25 1992 160 73 18 chr20 49253649 49254086 -22899796 + L1MB7 LINE L1 5704 6164 -20 6127 26 0 0 chr20 49254569 49255331 -22898551 - L1P LINE L1 -1167 4979 4218 7857 13 0 4 chr20 49255331 49256558 -22897324 + L1PA3 LINE L1 4931 6153 -2 214 347 10 0 chr20 49257104 49257202 -22896680 + L2 LINE L2 2561 2659 -655 373 213 28 19 chr20 49257513 49257621 -22896261 + MLT1J2 LTR MaLR 45 153 -297 759 237 12 6 chr20 49257622 49257791 -22896091 - MER5B DNA MER1_type -3 175 6 23 0 0 0 chr20 49257957 49257980 -22895902 + AT_rich Low_complexity Low_complexity 1 23 0 201 109 219 78 chr20 49258308 49258372 -22895510 + MER5B DNA MER1_type 1 73 -105 1051 176 22 102 chr20 49258628 49258952 -22894930 + L1ME2 LINE L1 5847 6144 -20 221 211 19 0 chr20 49260255 49260307 -22893575 + (TA)n Simple_repeat Simple_repeat 1 53 0 1463 215 138 33 chr20 49260327 49260782 -22893100 + MLT1D LTR MaLR 1 503 -2 339 270 58 58 chr20 49261343 49261480 -22892402 - MIR SINE MIR 0 262 126 747 266 87 68 chr20 49261824 49262488 -22891394 + L2 LINE L2 2649 3313 0 283 204 74 28 chr20 49264467 49264575 -22889307 - MIR SINE MIR -2 260 148 988 191 8 77 chr20 49264651 49264886 -22888996 + MER20 DNA MER1_type 1 219 0 973 214 11 0 chr20 49265023 49265210 -22888672 - MER5A DNA MER1_type 0 189 1 652 312 32 43 chr20 49265583 49265862 -22888020 + L2 LINE L2 3036 3311 -2 1909 117 37 0 chr20 49265878 49266151 -22887731 - AluY SINE Alu -13 298 16 254 246 0 0 chr20 49266475 49266532 -22887350 + (CAA)n Simple_repeat Simple_repeat 2 58 0 507 352 6 0 chr20 49266556 49266732 -22887150 - MIR SINE MIR -71 191 15 261 0 0 0 chr20 49266757 49266786 -22887096 + (ATTG)n Simple_repeat Simple_repeat 2 30 0 550 372 85 26 chr20 49267697 49268574 -22885308 + L2 LINE L2 2164 3085 -187 533 326 31 13 chr20 49268720 49268947 -22884935 + MIR SINE MIR 6 236 -26 793 242 84 47 chr20 49269166 49269464 -22884418 + L2 LINE L2 3005 3313 0 455 183 0 88 chr20 49269482 49269619 -22884263 - Charlie1 DNA MER1_type -14 2747 2623 * 539 268 149 0 chr20 49269616 49269810 -22884072 - Charlie1 DNA MER1_type -2535 226 4 204 83 56 0 chr20 49270690 49270726 -22883156 + A-rich Low_complexity Low_complexity 2 39 0 533 236 84 42 chr20 49270968 49271231 -22882651 + HAL1 LINE L1 1187 1460 -1047 632 314 102 35 chr20 49271570 49272022 -22881860 - L2 LINE L2 0 3313 2832 782 136 277 5 chr20 49272988 49273172 -22880710 + MER46A DNA MER2_type 1 234 -2 217 313 45 0 chr20 49273180 49273247 -22880635 - MIR SINE MIR -171 91 22 470 293 30 18 chr20 49273671 49273838 -22880044 - MIR3 SINE MIR -11 197 29 275 244 50 75 chr20 49274223 49274383 -22879499 + MER103 DNA DNA 7 162 -4 2358 102 0 6 chr20 49275296 49275609 -22878273 + AluSx SINE Alu 1 311 -1 455 248 62 31 chr20 49275731 49275860 -22878022 + L2 LINE L2 3175 3307 -6 1390 308 33 10 chr20 49276285 49276772 -22877110 + LTR33 LTR ERVL 1 498 -23 549 303 82 25 chr20 49277098 49277771 -22876111 - L1M4 LINE L1 -1587 4559 3849 270 81 0 0 chr20 49277971 49278008 -22875874 + (TGAA)n Simple_repeat Simple_repeat 1 37 0 520 346 117 53 chr20 49278103 49278837 -22875045 + L3 LINE CR1 791 1571 -6 270 0 0 0 chr20 49279117 49279147 -22874735 + (TG)n Simple_repeat Simple_repeat 2 31 0 475 328 17 0 chr20 49279147 49279321 -22874561 + Charlie8 DNA MER1_type 100 276 -2141 260 396 61 13 chr20 49279609 49279839 -22874043 - L2 LINE L2 -388 2926 2686 367 359 85 50 chr20 49279839 49280354 -22873528 + L1MEc LINE L1 36 568 -5828 749 204 93 0 chr20 49280396 49280558 -22873324 + MER58C DNA MER1_type 38 214 -1 689 287 60 51 chr20 49280559 49281088 -22872794 + L1MEc LINE L1 632 1170 -5226 1080 144 53 0 chr20 49281088 49281276 -22872606 + L1PA16 LINE L1 5960 6157 -9 689 287 60 51 chr20 49281276 49281416 -22872466 + L1MEc LINE L1 1170 1307 -5089 2230 98 0 47 chr20 49281544 49281862 -22872020 + AluSx SINE Alu 6 308 -4 189 214 0 0 chr20 49282030 49282072 -22871810 + (CATATA)n Simple_repeat Simple_repeat 3 44 0 755 254 28 0 chr20 49282780 49282961 -22870921 - MER58A DNA MER1_type 0 224 39 362 309 99 43 chr20 49282980 49283191 -22870691 - MIR SINE MIR -10 252 25 1093 187 49 115 chr20 49283191 49283582 -22870300 + MLT1A1 LTR MaLR 1 365 0 362 309 99 43 chr20 49283582 49283603 -22870279 - MIR SINE MIR -237 25 7 2246 78 0 50 chr20 49283750 49284070 -22869812 + AluY SINE Alu 1 304 -7 227 228 0 18 chr20 49284070 49284121 -22869761 - L1ME LINE L1 -458 5663 5614 1927 130 32 66 chr20 49284289 49284666 -22869216 + THE1B LTR MaLR 1 364 0 1699 139 68 49 chr20 49285192 49285558 -22868324 - THE1C LTR MaLR 0 375 3 2134 218 47 24 chr20 49286079 49286716 -22867166 + L1MD2 LINE L1 1379 2030 -4510 * 3643 243 62 13 chr20 49286699 49287905 -22865977 + L1MD2 LINE L1 3732 4996 -1544 942 207 26 0 chr20 49287907 49288100 -22865782 - Tigger1 DNA MER2_type 0 2418 2221 1338 173 78 0 chr20 49288101 49288385 -22865497 + L1MA4 LINE L1 5984 6289 -11 718 197 0 7 chr20 49288419 49288556 -22865326 - Tigger1 DNA MER2_type -2282 136 1 3308 201 50 31 chr20 49288591 49289983 -22863899 + L1MD2 LINE L1 5024 6438 -315 1811 131 8 0 chr20 49289988 49290256 -22863626 + AluSq SINE Alu 9 278 -35 1483 89 36 0 chr20 49290312 49290559 -22863323 + L1MA1 LINE L1 5892 6147 -155 1288 220 23 3 chr20 49290559 49290857 -22863025 + L1MD2 LINE L1 6438 6743 -10 2611 62 0 0 chr20 49290862 49291168 -22862714 + AluY SINE Alu 1 306 -5 1150 91 91 0 chr20 49291485 49291672 -22862210 - L1MA2 LINE L1 0 6304 6101 891 296 55 49 chr20 49291773 49292279 -22861603 + LTR33 LTR ERVL 1 509 -12 21 0 0 0 chr20 49292284 49292305 -22861577 + AT_rich Low_complexity Low_complexity 1 21 0 334 287 99 7 chr20 49292585 49292753 -22861129 - MIR SINE MIR -52 210 30 493 246 35 7 chr20 49292802 49292944 -22860938 - MLT1B LTR MaLR 0 390 245 21 57 0 0 chr20 49292952 49292987 -22860895 + AT_rich Low_complexity Low_complexity 1 35 0 784 29 0 0 chr20 49292988 49293094 -22860788 + L1PA2 LINE L1 5721 5826 -329 643 199 45 136 chr20 49293094 49293381 -22860501 - MLT1B LTR MaLR -127 263 3 189 0 0 0 chr20 49293928 49293949 -22859933 + (A)n Simple_repeat Simple_repeat 1 21 0 196 286 66 121 chr20 49294479 49294661 -22859221 - L2 LINE L2 -109 3163 2992 21 0 0 0 chr20 49295047 49295068 -22858814 + AT_rich Low_complexity Low_complexity 1 21 0 638 245 231 18 chr20 49297850 49298317 -22855565 - MLT1G3 LTR MaLR 0 530 38 482 139 12 0 chr20 49298361 49298447 -22855435 + GA-rich Low_complexity Low_complexity 1 87 0 208 143 29 0 chr20 49298522 49298557 -22855325 + CT-rich Low_complexity Low_complexity 1 36 0 * 228 194 32 16 chr20 49298550 49298572 -22855310 - L1MC3 LINE L1 -1114 6671 6651 2302 194 24 58 chr20 49298572 49299047 -22854835 + MLT2B1 LTR ERVL 4 464 -56 1342 171 68 43 chr20 49299047 49299328 -22854554 + AluJb SINE Alu 1 288 -24 748 170 12 73 chr20 49299328 49299357 -22854525 + AluJo SINE Alu 1 300 0 2302 194 24 58 chr20 49299357 49299413 -22854469 + MLT2B1 LTR ERVL 464 520 0 228 194 32 16 chr20 49299413 49299452 -22854430 - L1MC3 LINE L1 -1134 6651 6609 188 406 49 8 chr20 49299655 49299778 -22854104 + MIR SINE MIR 16 143 -65 244 32 0 0 chr20 49300206 49300237 -22853645 + L1PA13 LINE L1 6114 6144 -19 1974 135 3 20 chr20 49300246 49300573 -22853309 + AluSx SINE Alu 1 312 0 569 210 93 12 chr20 49300605 49300772 -22853110 + MIR SINE MIR 52 228 -34 858 204 74 0 chr20 49300772 49300948 -22852934 - MER5A DNA MER1_type 0 189 1 300 127 0 0 chr20 49300969 49301024 -22852858 + (ATG)n Simple_repeat Simple_repeat 2 56 0 220 293 13 13 chr20 49301404 49301479 -22852403 + MIR3 SINE MIR 133 207 -1 1384 78 5 44 chr20 49302000 49302204 -22851678 + MER107 DNA MER1_type 2 197 0 249 339 16 0 chr20 49302281 49302343 -22851539 + L2 LINE L2 3210 3272 0 770 209 121 24 chr20 49302401 49302607 -22851275 - MIR SINE MIR -1 261 36 1730 179 3 18 chr20 49302995 49303357 -22850525 + AluJb SINE Alu 1 358 0 2628 152 13 6 chr20 49304508 49304981 -22848901 + L1MA9 LINE L1 5836 6311 -1 590 222 64 41 chr20 49305027 49305198 -22848684 - MER5B DNA MER1_type -3 175 1 208 239 0 0 chr20 49305702 49305748 -22848134 - MIR SINE MIR -11 251 206 358 190 63 0 chr20 49306307 49306386 -22847496 - L2 LINE L2 -21 3251 3168 300 308 30 8 chr20 49306485 49306618 -22847264 + L2 LINE L2 2402 2537 -777 283 218 172 23 chr20 49306747 49306834 -22847048 - L2 LINE L2 0 3313 3214 369 233 48 101 chr20 49307215 49307404 -22846478 - MER117 DNA MER1_type -1 196 18 194 200 0 0 chr20 49307838 49307878 -22846004 - L2 LINE L2 -219 3053 3014 190 256 13 64 chr20 49309320 49309398 -22844484 + MIR SINE MIR 177 250 -12 707 293 66 26 chr20 49309502 49309775 -22844107 + L3 LINE CR1 1293 1576 -1 267 31 0 0 chr20 49310148 49310180 -22843702 + (TG)n Simple_repeat Simple_repeat 2 33 0 231 61 0 0 chr20 49310181 49310214 -22843668 + (GA)n Simple_repeat Simple_repeat 2 34 0 21 0 0 0 chr20 49310731 49310752 -22843130 + AT_rich Low_complexity Low_complexity 1 21 0 265 297 144 35 chr20 49311097 49311299 -22842583 + MLT1K LTR MaLR 365 588 0 306 0 0 0 chr20 49311417 49311451 -22842431 + (CA)n Simple_repeat Simple_repeat 2 35 0 314 311 17 34 chr20 49311867 49311986 -22841896 + MIR SINE MIR 12 128 -80 638 308 47 39 chr20 49312265 49312603 -22841279 - HERVL LTR ERVL -1405 4249 3909 1899 39 0 8 chr20 49312608 49312842 -22841040 - L1PA5 LINE L1 -7 6147 5916 261 269 83 19 chr20 49313205 49313313 -22840569 - LTR16B LTR ERVL -8 456 342 584 294 35 30 chr20 49313314 49313511 -22840371 + MIR SINE MIR 51 248 -14 187 285 23 115 chr20 49313662 49313792 -22840090 - L2 LINE L2 -222 3050 2933 274 369 37 53 chr20 49313839 49314083 -22839799 - L2 LINE L2 -481 2833 2594 662 342 67 19 chr20 49314100 49314416 -22839466 - L3 LINE CR1 -98 1479 1149 693 272 92 27 chr20 49314933 49315422 -22838460 + L1ME LINE L1 5299 5819 -302 5021 160 17 33 chr20 49315658 49316038 -22837844 - L1PA16 LINE L1 -9 6157 5772 210 37 0 0 chr20 49316038 49316065 -22837817 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5021 160 17 33 chr20 49316065 49316387 -22837495 - L1PA16 LINE L1 -394 5772 5446 183 80 0 0 chr20 49316387 49316412 -22837470 + (TTG)n Simple_repeat Simple_repeat 2 26 0 5021 160 17 33 chr20 49316412 49317086 -22836796 - L1PA16 LINE L1 -720 5446 4801 228 86 0 0 chr20 49317270 49317305 -22836577 + (A)n Simple_repeat Simple_repeat 1 35 0 2162 131 0 0 chr20 49317386 49317677 -22836205 + AluSx SINE Alu 2 292 -20 525 291 45 49 chr20 49318383 49318579 -22835303 - MIR SINE MIR -51 211 19 274 263 125 0 chr20 49318637 49318717 -22835165 - MIR SINE MIR -65 197 108 1658 164 65 14 chr20 49318765 49319132 -22834750 - L1MB1 LINE L1 0 6168 5783 541 270 128 18 chr20 49320317 49320591 -22833291 - LTR16C LTR ERVL 0 491 188 281 215 63 0 chr20 49320702 49320781 -22833101 + (TATATG)n Simple_repeat Simple_repeat 2 85 0 463 31 31 0 chr20 49320795 49320860 -22833022 + (CATATA)n Simple_repeat Simple_repeat 2 68 0 2128 111 0 14 chr20 49321607 49321904 -22831978 - AluSx SINE Alu -19 293 1 242 271 19 56 chr20 49322274 49322381 -22831501 - L2 LINE L2 -29 3284 3182 207 0 0 0 chr20 49322872 49322895 -22830987 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 696 275 5 5 chr20 49323908 49324097 -22829785 + MER5A DNA MER1_type 1 189 0 399 124 54 132 chr20 49324543 49324672 -22829210 + MLT1C LTR MaLR 6 124 -343 1872 127 187 14 chr20 49324995 49325358 -22828524 - MSTA LTR MaLR -2 426 1 220 250 135 54 chr20 49325556 49325704 -22828178 - MIR SINE MIR -62 200 41 196 260 219 10 chr20 49325832 49325928 -22827954 - MIR SINE MIR -77 185 70 679 236 84 15 chr20 49325929 49326132 -22827750 - MLT1C LTR MaLR 0 467 251 228 132 26 0 chr20 49326269 49326307 -22827575 + MIR SINE MIR 213 251 -11 207 256 0 0 chr20 49326273 49326312 -22827570 + L2 LINE L2 3263 3301 -12 * 2530 214 19 14 chr20 49328033 49328546 -22825336 - MLT2B1 LTR ERVL 0 520 5 338 83 0 17 chr20 49328585 49328645 -22825237 + (ATG)n Simple_repeat Simple_repeat 2 60 0 895 235 18 32 chr20 49328661 49328882 -22825000 - MIR SINE MIR -33 229 12 235 349 5 80 chr20 49328910 49329122 -22824760 + MIR SINE MIR 48 243 -19 482 308 155 19 chr20 49329395 49329717 -22824165 - L2 LINE L2 -2 3311 2946 366 260 62 34 chr20 49329796 49329942 -22823940 + MIR SINE MIR 48 197 -65 215 277 0 0 chr20 49330655 49330702 -22823180 + (TTA)n Simple_repeat Simple_repeat 3 49 0 232 348 132 25 chr20 49331009 49331213 -22822669 + L2 LINE L2 2562 2787 -527 774 185 0 15 chr20 49331283 49331418 -22822464 - AluJo SINE Alu -12 300 168 180 0 0 0 chr20 49331419 49331439 -22822443 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 589 219 0 0 chr20 49331443 49331557 -22822325 - AluJo SINE Alu -188 114 1 314 341 14 29 chr20 49331604 49331742 -22822140 + L2 LINE L2 2920 3055 -217 1281 201 14 24 chr20 49331751 49332045 -22821837 - MER58B DNA MER1_type 0 341 51 272 325 37 49 chr20 49332146 49332309 -22821573 + L2 LINE L2 3111 3271 -1 1113 289 38 8 chr20 49332593 49332966 -22820916 - LTR16A LTR ERVL -17 433 50 937 215 10 10 chr20 49332990 49333199 -22820683 - MER3 DNA MER1_type 0 209 1 285 299 87 69 chr20 49333666 49333862 -22820020 + MIR SINE MIR 15 212 -50 1076 213 47 24 chr20 49334794 49335047 -22818835 + MLT1A1 LTR MaLR 1 259 -106 999 273 107 37 chr20 49335085 49335514 -22818368 + L2 LINE L2 2855 3313 0 209 269 125 10 chr20 49335529 49335633 -22818249 - MIR SINE MIR -56 152 37 * 224 292 135 10 chr20 49335611 49335707 -22818175 + MIR SINE MIR 46 153 -109 21 36 0 0 chr20 49336625 49336653 -22817229 + AT_rich Low_complexity Low_complexity 1 28 0 1900 164 3 13 chr20 49337333 49337637 -22816245 + AluSx SINE Alu 1 301 -11 293 312 50 50 chr20 49337964 49338105 -22815777 - MER5A DNA MER1_type -48 141 1 24 32 0 0 chr20 49338306 49338337 -22815545 + AT_rich Low_complexity Low_complexity 1 31 0 300 377 101 53 chr20 49338351 49338709 -22815173 + L1ME LINE L1 308 682 -5734 286 268 0 32 chr20 49338760 49338883 -22814999 + L1ME LINE L1 950 1068 -5348 2524 136 28 15 chr20 49338989 49339446 -22814436 - L1MA9 LINE L1 0 6312 5850 315 171 40 26 chr20 49339515 49339591 -22814291 + L1ME LINE L1 1989 2065 -4361 510 135 11 0 chr20 49339606 49339695 -22814187 + L1MA9 LINE L1 5987 6076 -236 234 185 46 0 chr20 49339699 49339764 -22814118 + (TA)n Simple_repeat Simple_repeat 2 69 0 282 29 0 0 chr20 49339764 49339799 -22814083 + (CA)n Simple_repeat Simple_repeat 2 36 0 1340 296 77 38 chr20 49339801 49341199 -22812683 + L1ME LINE L1 4071 5522 -904 374 254 50 29 chr20 49341200 49341440 -22812442 + L1ME LINE L1 5543 5787 -659 207 286 0 0 chr20 49341925 49342002 -22811880 + (TA)n Simple_repeat Simple_repeat 2 78 0 29 60 0 0 chr20 49342146 49342196 -22811686 + AT_rich Low_complexity Low_complexity 1 50 0 513 180 0 33 chr20 49342365 49342487 -22811395 - L1MA8 LINE L1 -1 6290 6173 291 311 0 142 chr20 49342760 49342950 -22810932 + L2 LINE L2 3024 3186 -86 442 276 111 31 chr20 49342977 49343331 -22810551 - L1ME LINE L1 -653 5511 5127 263 292 45 0 chr20 49343583 49343672 -22810210 - MLT1I LTR MaLR -33 376 284 886 211 74 0 chr20 49344917 49345092 -22808790 + MER5A DNA MER1_type 1 188 -1 486 294 35 12 chr20 49345295 49345464 -22808418 + MIR SINE MIR 2 170 -38 547 181 64 0 chr20 49345477 49345571 -22808311 + MER5A DNA MER1_type 1 100 -89 1332 219 116 73 chr20 49345571 49345924 -22807958 - MLT1F1 LTR MaLR -8 559 164 2251 117 3 0 chr20 49345924 49346233 -22807649 - AluSq SINE Alu -3 310 1 1332 219 116 73 chr20 49346233 49346405 -22807477 - MLT1F1 LTR MaLR -403 164 1 356 221 39 0 chr20 49346405 49346482 -22807400 + MER5A DNA MER1_type 92 171 -18 670 256 11 6 chr20 49346648 49346824 -22807058 + MER5B DNA MER1_type 1 177 -1 188 231 209 11 chr20 49347910 49348001 -22805881 + MIR SINE MIR 39 147 -115 1897 100 21 7 chr20 49348007 49348296 -22805586 + L1PB3 LINE L1 5825 6117 -37 203 214 43 43 chr20 49348312 49348382 -22805500 + MIR SINE MIR 168 237 -25 220 250 52 0 chr20 49348398 49348534 -22805348 + GA-rich Low_complexity Low_complexity 3 145 0 400 321 74 16 chr20 49350060 49350250 -22803632 - MIR SINE MIR -15 247 47 299 176 0 15 chr20 49350573 49350641 -22803241 + GA-rich Low_complexity Low_complexity 2 68 0 249 83 0 0 chr20 49350786 49350822 -22803060 + (CA)n Simple_repeat Simple_repeat 2 37 0 263 342 43 8 chr20 49351277 49351394 -22802488 - MIR SINE MIR -126 136 16 184 266 16 47 chr20 49351669 49351733 -22802149 + L2 LINE L2 3252 3313 0 318 50 0 0 chr20 49351940 49351980 -22801902 + (CA)n Simple_repeat Simple_repeat 1 40 0 1800 112 4 12 chr20 49352337 49352587 -22801295 + AluSg SINE Alu 50 297 -13 373 232 45 58 chr20 49352762 49352917 -22800965 - L2 LINE L2 0 3313 3161 35526 28 3 0 chr20 49352983 49358229 -22795653 - L1PA2 LINE L1 -4 6151 900 595 325 63 45 chr20 49358258 49358578 -22795304 - L2 LINE L2 -211 3102 2777 2523 62 0 7 chr20 49358578 49358885 -22794997 - AluY SINE Alu -6 305 1 595 325 63 45 chr20 49358885 49358947 -22794935 - L2 LINE L2 -536 2777 2718 598 278 93 64 chr20 49358975 49359248 -22794634 - L3 LINE CR1 -479 1098 809 1611 84 5 19 chr20 49359248 49359461 -22794421 - AluSp SINE Alu -23 290 81 598 278 93 64 chr20 49359461 49359575 -22794307 - L3 LINE CR1 -768 809 700 375 309 120 37 chr20 49359661 49359776 -22794106 - MIR SINE MIR -23 239 100 2045 134 80 11 chr20 49359776 49360127 -22793755 - THE1C LTR MaLR 0 375 1 375 309 120 37 chr20 49360127 49360202 -22793680 - MIR SINE MIR -162 100 33 226 338 12 25 chr20 49360328 49360408 -22793474 - L3 LINE CR1 -932 645 567 297 151 0 0 chr20 49360477 49360530 -22793352 + (TTA)n Simple_repeat Simple_repeat 2 54 0 505 355 58 40 chr20 49360540 49360968 -22792914 - L3 LINE CR1 -1077 500 65 1424 166 124 4 chr20 49361187 49361452 -22792430 - AluJb SINE Alu -5 297 1 239 260 79 39 chr20 49362417 49362544 -22791338 + MIR SINE MIR 120 251 -11 278 339 141 0 chr20 49362850 49363027 -22790855 - MIR SINE MIR -2 260 59 247 210 92 50 chr20 49363521 49363640 -22790242 + MER113 DNA MER1_type? 1 124 -397 31 44 0 0 chr20 49363711 49363756 -22790126 + AT_rich Low_complexity Low_complexity 1 45 0 221 194 32 131 chr20 49363873 49364055 -22789827 - MER5B DNA MER1_type -39 150 1 308 296 19 0 chr20 49364063 49364171 -22789711 + MIR SINE MIR 153 262 0 284 380 100 0 chr20 49364648 49364798 -22789084 + L3 LINE CR1 1067 1231 -346 532 318 99 18 chr20 49364818 49365101 -22788781 - L2 LINE L2 -349 2965 2660 381 253 188 16 chr20 49365116 49365302 -22788580 + L3 LINE CR1 1236 1453 -124 421 193 17 67 chr20 49365302 49365421 -22788461 - MLT1H LTR MaLR 0 549 437 627 283 149 35 chr20 49365452 49365767 -22788115 - MLT1H LTR MaLR -198 351 1 289 279 6 32 chr20 49366602 49366760 -22787122 + (CATATA)n Simple_repeat Simple_repeat 1 154 0 508 287 207 35 chr20 49367073 49367498 -22786384 + L2 LINE L2 2808 3305 -8 373 298 202 39 chr20 49367511 49367793 -22786089 - LTR16C LTR ERVL -120 371 44 548 251 31 42 chr20 49368848 49369023 -22784859 + MER5A DNA MER1_type 1 175 -14 2134 120 0 0 chr20 49369023 49369306 -22784576 + AluSq SINE Alu 7 289 -24 548 251 31 42 chr20 49369306 49369321 -22784561 + MER5A DNA MER1_type 175 189 0 2215 128 0 0 chr20 49369659 49369955 -22783927 - AluSx SINE Alu -16 296 1 425 286 151 5 chr20 49370028 49370234 -22783648 - L1ME3 LINE L1 -76 6086 5851 1031 287 52 14 chr20 49370282 49370966 -22782916 - L1ME3 LINE L1 -717 5447 4738 12025 209 46 42 chr20 49370976 49371477 -22782405 - L1MA9 LINE L1 0 7272 6774 330 67 0 0 chr20 49371477 49371522 -22782360 + (TG)n Simple_repeat Simple_repeat 1 45 0 12025 209 46 42 chr20 49371522 49372369 -22781513 - L1MA9 LINE L1 -498 6774 5932 2184 163 81 2 chr20 49372369 49372762 -22781120 + MSTB LTR MaLR 3 426 0 12025 209 46 42 chr20 49372762 49373476 -22780406 - L1MA9 LINE L1 -1340 5932 5222 988 151 0 0 chr20 49373476 49373615 -22780267 - 7SLRNA srpRNA srpRNA -76 244 106 12025 209 46 42 chr20 49373615 49374318 -22779564 - L1MA9 LINE L1 -2050 5222 4523 2673 89 16 5 chr20 49374318 49374689 -22779193 - THE1C LTR MaLR 0 375 1 12025 209 46 42 chr20 49374689 49376488 -22777394 - L1MA9 LINE L1 -2749 4523 2732 2018 114 44 7 chr20 49376488 49376786 -22777096 - AluSc SINE Alu 0 309 1 12025 209 46 42 chr20 49376786 49377075 -22776807 - L1MA9 LINE L1 -4540 2732 2446 2122 160 0 0 chr20 49377075 49377387 -22776495 + 7SLRNA srpRNA srpRNA 1 312 -8 12025 209 46 42 chr20 49377387 49379112 -22774770 - L1MA9 LINE L1 -4826 2446 1 1081 261 75 48 chr20 49379144 49379960 -22773922 - L1ME3 LINE L1 -1428 4718 3881 857 302 78 40 chr20 49380076 49381323 -22772559 - L1ME3 LINE L1 -2542 3604 2311 3573 133 51 16 chr20 49381341 49381674 -22772208 - Tigger3b DNA MER2_type -2334 694 374 2146 122 3 0 chr20 49381674 49381962 -22771920 - AluSx SINE Alu -13 299 11 3573 133 51 16 chr20 49381962 49382299 -22771583 - Tigger3b DNA MER2_type -2654 374 1 236 317 103 0 chr20 49382432 49382577 -22771305 - MIR SINE MIR -13 249 90 270 394 0 0 chr20 49383039 49383194 -22770688 + MER117 DNA MER1_type 37 191 -6 363 203 0 0 chr20 49383374 49383448 -22770434 + MER116 DNA Mariner 5 78 -2 469 253 34 7 chr20 49384010 49384156 -22769726 + L1MC4a LINE L1 5725 5874 -1934 2059 95 15 0 chr20 49384156 49384420 -22769462 + AluSg SINE Alu 31 298 -12 2313 97 0 3 chr20 49384670 49384968 -22768914 + AluSq SINE Alu 1 297 -16 1237 138 71 18 chr20 49385259 49385483 -22768399 + MER54B LTR ERVL 447 682 -111 3030 94 6 34 chr20 49385559 49386036 -22767846 - L1PA16 LINE L1 -1 6165 5702 1755 251 42 5 chr20 49386065 49386471 -22767411 - LTR16C LTR ERVL -3 488 68 290 289 122 61 chr20 49386919 49387116 -22766766 + MIR SINE MIR 48 256 -6 885 255 99 83 chr20 49388060 49388787 -22765095 - L2 LINE L2 0 3313 2560 1304 159 38 3 chr20 49388980 49389269 -22764613 - MER33 DNA MER1_type 0 324 26 277 323 32 0 chr20 49389365 49389458 -22764424 - MIR SINE MIR -49 213 118 420 303 48 69 chr20 49390287 49390518 -22763364 + L2 LINE L2 2399 2624 -690 381 311 99 55 chr20 49391092 49391475 -22762407 + MLT1K LTR MaLR 168 567 -21 887 203 34 28 chr20 49391691 49391868 -22762014 - MER45A DNA AcHobo 0 178 1 214 182 0 23 chr20 49392507 49392551 -22761331 + (TG)n Simple_repeat Simple_repeat 2 44 0 381 318 128 9 chr20 49392609 49392820 -22761062 + MIR SINE MIR 6 241 -21 448 235 206 12 chr20 49392854 49393024 -22760858 - L2 LINE L2 -3 3310 3108 1175 242 127 60 chr20 49393119 49393178 -22760704 - MLT1G1 LTR MaLR -3 592 538 1977 166 34 3 chr20 49393178 49393533 -22760349 + MER47A DNA MER2_type 1 366 0 1175 242 127 60 chr20 49393533 49393960 -22759922 - MLT1G1 LTR MaLR -57 538 73 1007 231 212 21 chr20 49394129 49394555 -22759327 - MLT1H LTR MaLR -1 548 1 719 274 46 14 chr20 49394777 49394996 -22758886 + MIR SINE MIR 24 249 -13 638 238 40 58 chr20 49395297 49395520 -22758362 - MER20 DNA MER1_type 0 219 1 359 293 0 32 chr20 49396078 49396201 -22757681 - MER94 DNA DNA -15 119 1 1694 200 52 24 chr20 49398206 49398689 -22755193 - MER69 DNA AcHobo -65 2461 1962 2241 104 9 25 chr20 49398689 49399007 -22754875 + AluSp SINE Alu 1 313 0 1694 200 52 24 chr20 49399007 49399027 -22754855 - MER69 DNA AcHobo -564 1962 1944 266 250 42 28 chr20 49399044 49399116 -22754766 - MER69 DNA AcHobo -1153 73 1 581 300 52 91 chr20 49399155 49399615 -22754267 + L2 LINE L2 2827 3268 -4 383 336 8 0 chr20 49400447 49400572 -22753310 + MER117 DNA MER1_type 72 197 0 1537 199 101 71 chr20 49400695 49401133 -22752749 + MER74C LTR ERVL 10 460 0 199 296 11 57 chr20 49402042 49402116 -22751766 + L3 LINE CR1 1144 1215 -362 1126 132 0 38 chr20 49402116 49402329 -22751553 + L1MA6 LINE L1 6096 6300 0 199 296 11 57 chr20 49402329 49402342 -22751540 + L3 LINE CR1 1215 1227 -350 522 263 33 47 chr20 49402414 49402627 -22751255 - MIR SINE MIR -50 212 3 683 268 38 5 chr20 49402887 49403096 -22750786 - LTR16C LTR ERVL 0 491 276 25 0 0 0 chr20 49403145 49403170 -22750712 + AT_rich Low_complexity Low_complexity 1 25 0 2148 216 104 75 chr20 49403562 49404556 -22749326 + L1MC5 LINE L1 6562 7586 -375 1741 137 0 4 chr20 49404556 49404819 -22749063 - Tigger5 DNA MER2_type -1 2322 2061 22 35 0 0 chr20 49405162 49405191 -22748691 + AT_rich Low_complexity Low_complexity 1 29 0 220 333 49 12 chr20 49405419 49405581 -22748301 + MIR SINE MIR 95 262 0 247 313 0 12 chr20 49405779 49405859 -22748023 + CT-rich Low_complexity Low_complexity 1 79 0 618 268 26 32 chr20 49406518 49406708 -22747174 + MIR SINE MIR 68 256 -6 605 293 19 64 chr20 49406783 49407049 -22746833 + MIR SINE MIR 3 256 -6 679 319 39 19 chr20 49407747 49408054 -22745828 + Tigger8 DNA MER2_type 147 459 -207 297 171 57 0 chr20 49408061 49408131 -22745751 - MIR SINE MIR -5 257 184 2126 209 31 18 chr20 49408164 49408710 -22745172 + L1MC4 LINE L1 7490 8042 0 236 316 59 48 chr20 49408712 49408899 -22744983 + Tigger8 DNA MER2_type 473 661 -5 255 289 24 12 chr20 49409132 49409215 -22744667 + MIR SINE MIR 23 106 -102 234 277 0 0 chr20 49409422 49409487 -22744395 - MER116 DNA Mariner 0 80 16 332 281 50 8 chr20 49409688 49409809 -22744073 - L2 LINE L2 -12 3301 3176 207 231 0 0 chr20 49409847 49409886 -22743996 - MIR SINE MIR -7 255 217 337 315 9 9 chr20 49410568 49410676 -22743206 - MIR SINE MIR -108 154 47 272 282 77 0 chr20 49411270 49411348 -22742534 - L2 LINE L2 -932 2382 2299 230 296 0 14 chr20 49411426 49411497 -22742385 - L2 LINE L2 -1037 2277 2208 317 256 39 64 chr20 49411581 49411737 -22742145 + MIR SINE MIR 2 153 -109 1639 160 3 23 chr20 49411759 49412059 -22741823 + L1MD3 LINE L1 7700 7993 -2 615 175 47 85 chr20 49414543 49414754 -22739128 + L1MC5 LINE L1 7710 7912 -49 203 247 39 13 chr20 49414800 49414877 -22739005 - MIR SINE MIR -111 151 73 649 303 80 31 chr20 49414889 49415239 -22738643 + LTR16A LTR ERVL 8 374 -76 603 176 46 0 chr20 49416038 49416146 -22737736 - MER81 DNA DNA -1 113 1 714 173 154 6 chr20 49416609 49416771 -22737111 + MER5A DNA MER1_type 4 189 0 516 182 152 86 chr20 49417132 49417330 -22736552 - MLT1H1 LTR MaLR -291 264 54 586 201 11 116 chr20 49417377 49417526 -22736356 - MER5B DNA MER1_type -7 171 45 2338 110 3 0 chr20 49417526 49417836 -22736046 - AluSx SINE Alu -1 311 1 586 201 11 116 chr20 49417836 49417875 -22736007 - MER5B DNA MER1_type -133 45 3 185 325 12 38 chr20 49417877 49417957 -22735925 - MER5A DNA MER1_type -34 155 78 1165 266 131 42 chr20 49417957 49418453 -22735429 + MLT1F LTR MaLR 1 540 -2 236 278 0 0 chr20 49418469 49418523 -22735359 + MER5A DNA MER1_type 136 189 0 4247 129 17 46 chr20 49418734 49419140 -22734742 + L1MA4A LINE L1 5548 5964 -339 2561 80 0 0 chr20 49419140 49419451 -22734431 + AluSq SINE Alu 1 311 -2 4247 129 17 46 chr20 49419451 49419463 -22734419 + L1MA4A LINE L1 5964 5975 -328 282 29 0 0 chr20 49419463 49419498 -22734384 + (CA)n Simple_repeat Simple_repeat 2 36 0 4247 129 17 46 chr20 49419498 49419855 -22734027 + L1MA4A LINE L1 5975 6301 -2 552 279 86 27 chr20 49419924 49420146 -22733736 - LTR16C LTR ERVL -10 481 247 265 241 78 60 chr20 49420483 49420599 -22733283 + L2 LINE L2 3181 3298 -15 1125 226 121 56 chr20 49420865 49421294 -22732588 + LTR16A1 LTR ERVL 1 457 0 252 280 21 11 chr20 49421414 49421507 -22732375 - MIR SINE MIR -13 249 156 1275 218 154 94 chr20 49421509 49422092 -22731790 - MLT1E1 LTR MaLR 0 624 7 261 317 39 19 chr20 49422343 49422447 -22731435 + MIR SINE MIR 23 130 -78 562 256 10 13 chr20 49422504 49422667 -22731215 + MLT1J2 LTR MaLR 61 220 -189 266 209 47 47 chr20 49422732 49422818 -22731064 + MLT1J2 LTR MaLR 365 450 0 187 359 19 9 chr20 49422818 49422924 -22730958 + MIR SINE MIR 154 260 -2 294 53 0 158 chr20 49423626 49423683 -22730199 + L1PA3 LINE L1 6107 6154 0 397 138 55 1 chr20 49423756 49423849 -22730033 + L1MA7 LINE L1 6203 6291 0 368 281 23 72 chr20 49424024 49424245 -22729637 - MIR SINE MIR -41 221 12 479 281 157 5 chr20 49424252 49424462 -22729420 - MIR SINE MIR -4 258 17 302 305 317 4 chr20 49425419 49425681 -22728201 + L3 LINE CR1 560 903 -674 21 57 0 0 chr20 49426289 49426324 -22727558 + AT_rich Low_complexity Low_complexity 1 35 0 467 202 8 50 chr20 49426459 49426578 -22727304 + MER103 DNA DNA 52 165 -1 469 293 104 22 chr20 49426679 49426901 -22726981 + MIR SINE MIR 23 262 0 1099 248 94 33 chr20 49427041 49427465 -22726417 - LTR33A LTR ERVL -8 515 66 195 100 0 0 chr20 49428506 49428536 -22725346 + (CA)n Simple_repeat Simple_repeat 1 30 0 239 216 328 9 chr20 49428539 49428655 -22725227 - L2 LINE L2 0 3313 3161 318 234 0 0 chr20 49428656 49428763 -22725119 + (CA)n Simple_repeat Simple_repeat 2 108 0 1759 176 14 3 chr20 49429070 49429366 -22724516 + AluJo SINE Alu 1 299 -13 773 307 4 4 chr20 49429547 49429772 -22724110 - MIR SINE MIR 0 262 38 1285 130 43 17 chr20 49429895 49430126 -22723756 + MER96B DNA MER1_type? 4 240 -177 450 288 64 64 chr20 49430165 49430401 -22723481 - MLT1F1 LTR MaLR -194 396 161 2384 108 0 3 chr20 49430420 49430727 -22723155 - AluSg SINE Alu 0 310 5 544 214 26 8 chr20 49430732 49430857 -22723025 - MLT1F1 LTR MaLR -372 171 52 1108 207 190 55 chr20 49431724 49432140 -22721742 - LTR33A LTR ERVL -49 474 3 462 333 22 0 chr20 49432242 49432422 -22721460 - MIR SINE MIR -71 191 8 280 270 140 39 chr20 49432429 49432607 -22721275 + MIR SINE MIR 21 216 -46 834 275 71 11 chr20 49432978 49433258 -22720624 + LTR16C LTR ERVL 195 491 0 332 301 0 18 chr20 49434195 49434308 -22719574 - MER5A DNA MER1_type -23 166 56 1017 207 85 30 chr20 49434341 49434646 -22719236 - LTR37A LTR ERV1 -20 406 85 2445 138 20 8 chr20 49434676 49435067 -22718815 + MER57A LTR ERV1 8 403 0 1280 286 71 56 chr20 49435092 49435698 -22718184 - MER21B LTR ERV1 -149 714 100 260 222 74 104 chr20 49435674 49435809 -22718073 - MER77 LTR ERV1 -409 196 66 * 1236 228 126 6 chr20 49435895 49436237 -22717645 - L1ME3A LINE L1 -2 6168 5786 279 361 10 17 chr20 49436488 49436691 -22717191 + GA-rich Low_complexity Low_complexity 1 201 0 180 158 0 193 chr20 49437111 49437168 -22716714 - L2 LINE L2 -17 3255 3210 639 300 70 9 chr20 49437303 49437530 -22716352 + MIR SINE MIR 3 243 -19 2711 90 3 3 chr20 49437969 49438324 -22715558 - THE1A LTR MaLR 0 355 1 12084 83 13 1 chr20 49438324 49439886 -22713996 - THE1A-int LTR MaLR 0 1580 1 2768 76 3 6 chr20 49439886 49440242 -22713640 - THE1A LTR MaLR 0 355 1 267 278 0 0 chr20 49440424 49440496 -22713386 + LTR16A1 LTR ERVL 2 73 -384 1014 201 56 13 chr20 49440503 49440737 -22713145 + LTR16A1 LTR ERVL 214 457 0 341 271 222 0 chr20 49441861 49442064 -22711818 - MIR SINE MIR -2 260 13 485 248 18 0 chr20 49442657 49442770 -22711112 + MER94 DNA DNA 19 133 -1 529 264 18 36 chr20 49443079 49443257 -22710625 + MER5A DNA MER1_type 1 164 -14 180 364 45 0 chr20 49444663 49444729 -22709153 + L2 LINE L2 3182 3250 -22 423 311 5 53 chr20 49444961 49445151 -22708731 - L2 LINE L2 -173 3099 2919 230 354 53 0 chr20 49445600 49445713 -22708169 - L2 LINE L2 0 3272 3154 496 259 30 8 chr20 49445823 49445954 -22707928 - MIR SINE MIR -117 145 12 624 275 111 53 chr20 49446264 49446787 -22707095 + L1ME4a LINE L1 5297 5849 -272 289 237 67 52 chr20 49446809 49446944 -22706938 + L1ME4a LINE L1 5974 6110 -11 273 293 31 100 chr20 49447107 49447366 -22706516 + L2 LINE L2 2546 2786 -528 921 218 57 19 chr20 49448447 49448658 -22705224 + MER58A DNA MER1_type 2 220 -4 184 366 59 20 chr20 49448704 49448805 -22705077 - L2 LINE L2 0 3272 3168 2110 232 61 20 chr20 49448813 49449409 -22704473 - MLT1E2 LTR MaLR 0 626 3 576 306 93 34 chr20 49449419 49449844 -22704038 - MLT1J1 LTR MaLR -1 449 28 219 300 17 0 chr20 49452658 49452718 -22701164 + MER91 DNA MER1_type 130 190 0 790 226 28 11 chr20 49452874 49453055 -22700827 - MER5A DNA MER1_type 0 189 6 287 305 86 23 chr20 49453362 49453490 -22700392 - MIR SINE MIR -1 261 126 387 315 84 14 chr20 49453676 49453889 -22699993 + MIR SINE MIR 20 247 -15 200 320 139 25 chr20 49454463 49454585 -22699297 + MIR SINE MIR 127 262 0 389 284 127 8 chr20 49454653 49454787 -22699095 + MIR SINE MIR 113 262 0 695 126 27 9 chr20 49454817 49454928 -22698954 - MER81 DNA DNA 0 114 2 352 357 14 0 chr20 49455848 49456022 -22697860 + (TG)n Simple_repeat Simple_repeat 1 176 0 341 291 24 31 chr20 49456261 49456388 -22697494 + L2 LINE L2 3188 3313 0 408 226 11 17 chr20 49456401 49456578 -22697304 + (TGGA)n Simple_repeat Simple_repeat 4 179 0 405 176 0 0 chr20 49458336 49458404 -22695478 - MER63 DNA MER1_type -311 750 683 406 231 68 113 chr20 49458610 49458850 -22695032 + MIR SINE MIR 22 261 -1 321 262 138 42 chr20 49459462 49459610 -22694272 + MIR3 SINE MIR 6 166 -62 221 348 0 0 chr20 49460215 49460307 -22693575 + (TATATG)n Simple_repeat Simple_repeat 6 97 0 219 311 204 44 chr20 49460745 49461108 -22692774 + L2 LINE L2 2433 2853 -461 439 230 108 58 chr20 49461366 49461505 -22692377 + L2 LINE L2 3163 3308 -5 424 344 122 32 chr20 49462089 49462253 -22691629 + L1ME LINE L1 5414 5562 -559 1803 191 31 8 chr20 49462253 49462608 -22691274 + MLT1A1 LTR MaLR 3 365 0 424 344 122 32 chr20 49462608 49462649 -22691233 + L1ME LINE L1 5562 5598 -523 2630 105 70 2 chr20 49462649 49463050 -22690832 + MSTA LTR MaLR 1 428 0 424 344 122 32 chr20 49463050 49463154 -22690728 + L1ME LINE L1 5598 5752 -369 3661 120 64 3 chr20 49463248 49463838 -22690044 - L1MA5 LINE L1 -2 6298 5673 352 290 121 59 chr20 49463842 49464149 -22689733 + L1ME4a LINE L1 5710 6035 -86 608 335 173 24 chr20 49464290 49464523 -22689359 - L2 LINE L2 -605 2709 2512 1954 122 3 23 chr20 49464523 49464827 -22689055 + AluSg SINE Alu 1 298 -12 608 335 173 24 chr20 49464827 49465316 -22688566 - L2 LINE L2 -802 2512 1879 429 258 152 0 chr20 49465375 49465526 -22688356 + MIR SINE MIR 31 204 -58 758 208 7 7 chr20 49465529 49465673 -22688209 + FAM SINE Alu 23 166 -19 528 316 93 63 chr20 49465732 49466283 -22687599 - L2 LINE L2 -1506 1808 1242 199 220 140 80 chr20 49466668 49466768 -22687114 - MER5A DNA MER1_type -26 163 58 253 269 21 54 chr20 49467546 49467639 -22686243 - L2 LINE L2 0 3272 3183 231 88 0 0 chr20 49467781 49467815 -22686067 + (TTA)n Simple_repeat Simple_repeat 2 35 0 476 303 216 9 chr20 49467849 49468169 -22685713 - L2 LINE L2 -2 3311 2926 2016 135 0 6 chr20 49468763 49469075 -22684807 + AluSq SINE Alu 1 310 -3 1276 170 90 48 chr20 49469086 49469375 -22684507 + AluSq SINE Alu 2 302 -1 694 211 91 0 chr20 49469396 49469571 -22684311 + L1MD3 LINE L1 7790 7980 -15 306 248 133 53 chr20 49469804 49470118 -22683764 + L2 LINE L2 2723 3054 -218 230 349 0 0 chr20 49470316 49470382 -22683500 + L2 LINE L2 3192 3257 -15 201 213 0 0 chr20 49470418 49470465 -22683417 + GA-rich Low_complexity Low_complexity 4 50 0 2034 177 0 49 chr20 49470876 49470988 -22682894 + MLT1B LTR MaLR 5 121 -269 1529 139 56 38 chr20 49470988 49471276 -22682606 + AluJb SINE Alu 1 293 -19 2034 177 0 49 chr20 49471276 49471569 -22682313 + MLT1B LTR MaLR 121 390 0 653 276 41 0 chr20 49471748 49471918 -22681964 + MIR SINE MIR 16 192 -70 251 114 23 0 chr20 49472044 49472088 -22681794 + GA-rich Low_complexity Low_complexity 2 46 0 2260 101 3 0 chr20 49472236 49472543 -22681339 + AluSx SINE Alu 1 308 -4 188 323 0 15 chr20 49473133 49473198 -22680684 + MIR SINE MIR 3 66 -196 550 279 165 30 chr20 49473298 49473595 -22680287 + MLT1I LTR MaLR 5 341 -68 824 233 70 0 chr20 49473609 49473781 -22680101 - MER58A DNA MER1_type -40 184 1 417 260 112 35 chr20 49473810 49473979 -22679903 + L2 LINE L2 3129 3310 -3 326 321 37 15 chr20 49473984 49474118 -22679764 + MIR SINE MIR 74 210 -52 1045 209 42 0 chr20 49474330 49474545 -22679337 + MER58A DNA MER1_type 1 224 0 249 378 45 20 chr20 49474601 49474802 -22679080 - L3 LINE CR1 -711 866 661 2247 87 0 7 chr20 49474839 49475138 -22678744 + AluSg SINE Alu 1 297 -13 231 361 12 0 chr20 49475308 49475391 -22678491 - L3 LINE CR1 -921 656 573 226 365 94 5 chr20 49475444 49475647 -22678235 - MIR SINE MIR -1 261 41 250 279 49 0 chr20 49475847 49475908 -22677974 + L2 LINE L2 3246 3309 -4 296 296 65 24 chr20 49476007 49476208 -22677674 + MIR SINE MIR 32 241 -21 589 265 66 29 chr20 49476229 49476465 -22677417 - MIR SINE MIR -3 259 20 316 250 162 41 chr20 49476993 49477186 -22676696 + MIR SINE MIR 15 232 -30 724 237 69 25 chr20 49477274 49477493 -22676389 - MIR SINE MIR 0 262 36 242 284 45 0 chr20 49478719 49478807 -22675075 - MIR SINE MIR -78 130 39 402 305 16 23 chr20 49478967 49479095 -22674787 + MIR SINE MIR 20 146 -116 844 280 86 52 chr20 49479096 49479539 -22674343 - L2 LINE L2 -9 3304 2847 266 302 47 9 chr20 49479535 49479641 -22674241 + MIR SINE MIR 49 158 -104 * 241 313 15 0 chr20 49480075 49480142 -22673740 + MIR SINE MIR 79 146 -116 250 236 42 42 chr20 49480152 49480224 -22673658 - L2 LINE L2 -7 3306 3235 219 299 0 0 chr20 49481481 49481651 -22672231 + (CA)n Simple_repeat Simple_repeat 1 170 0 520 248 15 15 chr20 49481786 49481923 -22671959 - MIR SINE MIR -113 149 13 293 0 27 0 chr20 49482124 49482161 -22671721 + (CA)n Simple_repeat Simple_repeat 1 38 0 357 204 226 0 chr20 49482189 49482282 -22671600 + MER81 DNA DNA 1 114 0 253 305 11 42 chr20 49482674 49482769 -22671113 + MIR SINE MIR 28 120 -88 437 309 23 23 chr20 49482831 49483006 -22670876 + L2 LINE L2 2532 2706 -608 4217 225 40 40 chr20 49483007 49485083 -22668799 - L1ME1 LINE L1 -5 6161 4083 709 230 25 29 chr20 49485082 49485286 -22668596 - L1ME1 LINE L1 -2518 3628 3426 * 1854 192 87 38 chr20 49485254 49485310 -22668572 - L1ME1 LINE L1 -2951 3195 3143 2146 105 3 0 chr20 49485310 49485606 -22668276 - AluSx SINE Alu -15 297 1 1854 192 87 38 chr20 49485606 49486101 -22667781 - L1ME1 LINE L1 -3003 3143 2617 345 314 13 59 chr20 49486105 49486258 -22667624 + MLT1J2 LTR MaLR 268 413 -37 282 143 0 0 chr20 49486711 49486760 -22667122 + (TGGG)n Simple_repeat Simple_repeat 4 52 0 252 308 135 16 chr20 49487512 49487697 -22666185 + L1MEd LINE L1 465 671 -5448 2344 73 0 3 chr20 49488132 49488433 -22665449 - AluY SINE Alu -11 300 1 772 314 81 8 chr20 49488538 49488920 -22664962 - LTR16C LTR ERVL -8 483 74 2023 173 99 18 chr20 49489136 49489530 -22664352 - MSTB LTR MaLR 0 426 1 315 311 92 68 chr20 49489664 49489870 -22664012 + MIR SINE MIR 25 235 -27 252 269 72 8 chr20 49489993 49490145 -22663737 - MLT1G1 LTR MaLR -3 592 395 844 209 7 0 chr20 49490174 49490322 -22663560 + MER58B DNA MER1_type 190 338 -3 1584 223 59 19 chr20 49490338 49490710 -22663172 - MLT1G1 LTR MaLR -208 387 1 260 254 16 0 chr20 49491092 49491155 -22662727 - MIR SINE MIR 0 262 199 212 98 0 24 chr20 49491206 49491247 -22662635 + (TTTTTG)n Simple_repeat Simple_repeat 3 42 0 2282 77 3 0 chr20 49493161 49493458 -22660424 - AluSx SINE Alu -14 298 1 618 210 158 74 chr20 49494258 49494568 -22659314 + MLT1L LTR MaLR 263 598 -17 588 96 4 3 chr20 49494573 49494804 -22659078 - AluSc SINE Alu -9 300 1 625 301 141 38 chr20 49494968 49495387 -22658495 + L2 LINE L2 2851 3312 -1 409 358 24 0 chr20 49495400 49495565 -22658317 - MIR SINE MIR -42 220 52 792 120 0 0 chr20 49495766 49495883 -22657999 + AluSg/x SINE Alu 190 306 -3 437 230 111 0 chr20 49496146 49496272 -22657610 - MER91C DNA MER1_type 0 140 1 195 118 29 0 chr20 49496311 49496345 -22657537 - MER5A DNA MER1_type -45 144 110 2078 117 0 16 chr20 49497530 49497846 -22656036 + AluY SINE Alu 1 311 0 734 319 44 4 chr20 49498023 49498274 -22655608 + MIR SINE MIR 2 262 0 673 199 35 0 chr20 49499249 49499390 -22654492 - MER103 DNA DNA -16 150 5 478 211 301 0 chr20 49499465 49499598 -22654284 + MER5A DNA MER1_type 11 183 -6 291 274 103 8 chr20 49500243 49500360 -22653522 + MIR SINE MIR 9 136 -126 * 416 188 35 0 chr20 49500356 49500441 -22653441 + L2 LINE L2 3185 3272 0 195 313 0 0 chr20 49500451 49500515 -22653367 + MIR SINE MIR 131 194 -68 359 289 21 0 chr20 49501133 49501230 -22652652 + MIR SINE MIR 105 203 -59 850 248 3 14 chr20 49501456 49501683 -22652199 - MIR SINE MIR -2 260 39 260 169 17 34 chr20 49503122 49503181 -22650701 + MLT1I LTR MaLR 347 450 0 1172 203 33 0 chr20 49503318 49503530 -22650352 + MER20 DNA MER1_type 1 219 0 566 268 75 115 chr20 49504952 49505430 -22648452 + LTR16C LTR ERVL 1 459 -32 246 200 15 31 chr20 49506363 49506428 -22647454 + GA-rich Low_complexity Low_complexity 2 65 0 226 355 65 0 chr20 49507094 49507201 -22646681 + MIR SINE MIR 90 203 -59 1212 266 77 19 chr20 49507753 49507842 -22646040 + L1ME4a LINE L1 5277 5359 -762 1079 154 12 0 chr20 49507842 49508004 -22645878 + FAM SINE Alu 2 165 -10 1212 266 77 19 chr20 49508004 49508449 -22645433 + L1ME4a LINE L1 5359 5828 -293 355 270 40 27 chr20 49508459 49508607 -22645275 + L1ME4a LINE L1 5880 6029 -92 21 0 0 0 chr20 49508910 49508931 -22644951 + AT_rich Low_complexity Low_complexity 1 21 0 306 318 68 16 chr20 49508956 49509148 -22644734 + L1M4 LINE L1 4124 4325 -1821 487 305 73 26 chr20 49509244 49509546 -22644336 - HsTC2 DNA Tc2 -1021 877 562 470 304 0 63 chr20 49510040 49510231 -22643651 + G-rich Low_complexity Low_complexity 1 179 0 306 286 34 8 chr20 49510708 49510827 -22643055 - MIR SINE MIR -30 232 111 227 364 18 0 chr20 49510826 49510936 -22642946 + L2 LINE L2 3140 3251 -21 * 188 278 165 9 chr20 49511675 49511790 -22642092 - L2 LINE L2 -13 3259 3127 324 247 22 0 chr20 49512208 49512297 -22641585 - MER103 DNA DNA -41 125 35 271 365 0 9 chr20 49512743 49512850 -22641032 - MER5A DNA MER1_type 0 189 84 270 290 112 9 chr20 49513055 49513162 -22640720 - MIR SINE MIR -70 192 75 400 316 30 43 chr20 49513210 49513441 -22640441 - L2 LINE L2 -887 2427 2200 1744 126 0 69 chr20 49513505 49513822 -22640060 + L1MB5 LINE L1 5585 5879 -295 1316 178 40 44 chr20 49513823 49514098 -22639784 + AluJo SINE Alu 1 274 -38 814 279 23 49 chr20 49514371 49514718 -22639164 + L2 LINE L2 2433 2770 -544 2295 174 5 3 chr20 49514931 49515310 -22638572 - MLT1B LTR MaLR -10 380 1 600 268 161 0 chr20 49516046 49516253 -22637629 + MIR SINE MIR 13 252 -10 1022 249 50 79 chr20 49517156 49517597 -22636285 - LTR16A1 LTR ERVL 0 457 30 1111 209 25 17 chr20 49517610 49517845 -22636037 + MER92B LTR ERV1 1 237 -399 2284 109 0 10 chr20 49517863 49518167 -22635715 + AluSx SINE Alu 3 303 -9 814 214 17 17 chr20 49519189 49519362 -22634520 - MLT2F LTR ERVL -490 173 1 456 288 0 8 chr20 49519394 49519526 -22634356 + MLT1K LTR MaLR 458 588 0 651 268 48 17 chr20 49519956 49520187 -22633695 + MIR SINE MIR 14 251 -11 1591 128 3 125 chr20 49520318 49520653 -22633229 + AluSg1 SINE Alu 1 294 -15 700 138 191 0 chr20 49520897 49521049 -22632833 - MER96B DNA MER1_type? -1 416 236 2112 203 29 46 chr20 49521384 49521866 -22632016 + MLT1D LTR MaLR 1 474 -31 370 133 67 0 chr20 49521874 49521934 -22631948 + MLT1D-int LTR MaLR 1 64 -1307 562 303 49 67 chr20 49522979 49523263 -22630619 + MLT1I LTR MaLR 98 376 -33 451 163 81 0 chr20 49523401 49523487 -22630395 - MER103 DNA DNA -8 158 66 687 275 26 16 chr20 49523492 49523681 -22630201 + MIR SINE MIR 5 195 -67 441 308 77 16 chr20 49524073 49524255 -22629627 - MLT1-int LTR MaLR -487 884 692 212 321 0 0 chr20 49524508 49524564 -22629318 + L2 LINE L2 3257 3312 -1 774 262 69 83 chr20 49525202 49525683 -22628199 + LTR16C LTR ERVL 1 474 -17 505 303 72 11 chr20 49525816 49526048 -22627834 + MIR SINE MIR 5 250 -12 351 307 75 96 chr20 49526527 49526872 -22627010 - L2 LINE L2 0 3272 2935 670 266 153 65 chr20 49527163 49527593 -22626289 + MLT1G LTR MaLR 35 498 -57 186 362 129 25 chr20 49527993 49528358 -22625524 - L2 LINE L2 -518 2796 2394 262 298 68 58 chr20 49528449 49528640 -22625242 - L2 LINE L2 -3 3310 3118 1419 243 81 70 chr20 49528698 49529282 -22624600 - MLT1G1 LTR MaLR -5 590 1 435 302 15 63 chr20 49529282 49529487 -22624395 - L2 LINE L2 -213 3059 2865 1464 266 83 33 chr20 49529740 49530256 -22623626 + MLT1F LTR MaLR 1 542 0 228 255 20 0 chr20 49530401 49530452 -22623430 - L3 LINE CR1 -105 1472 1421 2743 209 52 54 chr20 49531505 49531595 -22622287 + MER44D DNA MER2_type 1 90 -2397 4763 86 16 2 chr20 49531595 49532223 -22621659 + L1PA11 LINE L1 5523 6159 -15 2743 209 52 54 chr20 49532223 49532772 -22621110 + MER44D DNA MER2_type 90 513 -1974 2397 107 0 0 chr20 49532772 49533082 -22620800 + AluSg SINE Alu 1 310 0 2743 209 52 54 chr20 49533082 49533167 -22620715 + MER44D DNA MER2_type 513 597 -8 1000 207 5 0 chr20 49534358 49534546 -22619336 + MER5A DNA MER1_type 1 189 0 312 210 3 15 chr20 49535398 49535482 -22618400 + MIR SINE MIR 12 96 -112 390 300 119 48 chr20 49535821 49536408 -22617474 + L2 LINE L2 2628 3257 -15 312 298 113 30 chr20 49536848 49537016 -22616866 - L3 LINE CR1 -3 1574 1393 606 350 66 30 chr20 49537218 49537775 -22616107 - L3 LINE CR1 -571 1006 430 652 301 96 42 chr20 49537863 49538248 -22615634 + MLT1J LTR MaLR 104 509 -2 257 360 208 0 chr20 49538270 49538506 -22615376 - L3 LINE CR1 -1182 395 111 2578 149 14 19 chr20 49538934 49539362 -22614520 - MSTB LTR MaLR 0 426 1 268 267 0 57 chr20 49540737 49540842 -22613040 - LTR67 LTR ERVL -3 554 456 270 0 0 0 chr20 49541051 49541081 -22612801 + (TG)n Simple_repeat Simple_repeat 1 30 0 251 339 40 20 chr20 49541100 49541348 -22612534 - L1M4 LINE L1 -1861 4285 4033 2377 212 85 80 chr20 49541413 49542163 -22611719 + MER21B LTR ERV1 25 778 -85 7858 24 0 1 chr20 49542701 49544282 -22609600 + L1PA4 LINE L1 4575 6155 0 41 21 0 0 chr20 49544424 49544472 -22609410 + AT_rich Low_complexity Low_complexity 1 48 0 1496 181 18 93 chr20 49544472 49544859 -22609023 - MLT2D LTR ERVL -56 358 1 252 259 0 0 chr20 49544870 49544928 -22608954 + LTR16B LTR ERVL 407 464 0 4845 175 54 28 chr20 49545429 49545611 -22608271 - L1MA10 LINE L1 -3 6331 6155 375 89 0 0 chr20 49545611 49545667 -22608215 + (TG)n Simple_repeat Simple_repeat 2 57 0 4845 175 54 28 chr20 49545667 49546803 -22607079 - L1MA10 LINE L1 -179 6155 4980 1676 278 54 15 chr20 49546991 49547246 -22606636 + L2 LINE L2 2361 2605 -708 2027 164 27 27 chr20 49547246 49547611 -22606271 + MLT1A1 LTR MaLR 1 365 0 1676 278 54 15 chr20 49547611 49548049 -22605833 + L2 LINE L2 2605 3076 -237 889 199 31 66 chr20 49548073 49548329 -22605553 - MLT1D LTR MaLR -258 247 1 208 307 13 13 chr20 49548550 49548625 -22605257 + MIR SINE MIR 49 123 -139 724 295 91 9 chr20 49548714 49549043 -22604839 - L2 LINE L2 0 3313 2958 289 378 8 0 chr20 49549092 49549211 -22604671 - MIR SINE MIR -133 129 10 684 167 215 0 chr20 49549455 49549599 -22604283 - MER96 DNA MER1_type 0 175 1 187 254 0 51 chr20 49550626 49550685 -22603197 - L2 LINE L2 -2082 1232 1177 977 276 96 32 chr20 49551414 49551852 -22602030 + LTR33A LTR ERVL 7 472 -51 995 207 31 18 chr20 49552329 49552551 -22601331 + MER96B DNA MER1_type? 2 226 -191 476 214 54 0 chr20 49552663 49552775 -22601107 + L2 LINE L2 3196 3313 0 1349 262 91 48 chr20 49552824 49553472 -22600410 + L1ME4a LINE L1 5348 6034 -87 1717 160 7 17 chr20 49553472 49553765 -22600117 - AluJb SINE Alu -22 290 1 1349 262 91 48 chr20 49553765 49553854 -22600028 + L1ME4a LINE L1 6034 6118 -3 192 286 95 0 chr20 49554170 49554233 -22599649 + MIR SINE MIR 102 170 -92 1144 297 41 8 chr20 49554261 49554648 -22599234 - MLT1I LTR MaLR -9 400 1 273 146 36 55 chr20 49554773 49554828 -22599054 - MIR SINE MIR -155 107 54 199 135 0 39 chr20 49555602 49555654 -22598228 + (CA)n Simple_repeat Simple_repeat 1 50 0 2115 131 58 17 chr20 49555919 49556279 -22597603 - THE1C LTR MaLR 0 375 1 426 185 40 113 chr20 49556472 49556623 -22597259 - L2 LINE L2 -15 3298 3159 701 179 20 40 chr20 49556660 49556811 -22597071 + MIR SINE MIR 114 261 -1 398 333 115 23 chr20 49556829 49557219 -22596663 - L2 LINE L2 -192 3080 2655 700 279 26 5 chr20 49557679 49557869 -22596013 + MER117 DNA MER1_type 4 197 0 755 283 116 45 chr20 49557878 49558232 -22595650 - MLT1K LTR MaLR 0 588 210 234 0 0 0 chr20 49558856 49558882 -22595000 + (A)n Simple_repeat Simple_repeat 1 26 0 1068 211 105 40 chr20 49558954 49559258 -22594624 + MER5C DNA MER1_type 1 324 0 690 246 92 71 chr20 49559583 49559960 -22593922 - MLT1F LTR MaLR 0 590 197 467 256 185 84 chr20 49560429 49560656 -22593226 - MIR SINE MIR 0 262 13 402 296 15 15 chr20 49561325 49561457 -22592425 + MIR SINE MIR 3 134 -128 457 278 42 84 chr20 49561475 49561812 -22592070 + MLT1I LTR MaLR 89 388 -21 2401 167 33 17 chr20 49561812 49562231 -22591651 - MSTB LTR MaLR 0 426 1 457 278 42 84 chr20 49562231 49562252 -22591630 + MLT1I LTR MaLR 388 408 -1 462 227 99 6 chr20 49562259 49562442 -22591440 - MER58C DNA MER1_type 0 215 3 213 176 0 78 chr20 49562444 49562495 -22591387 + MIR SINE MIR 158 204 -58 192 217 315 22 chr20 49562546 49562638 -22591244 - L2 LINE L2 -12 3301 3183 243 255 92 38 chr20 49563120 49563326 -22590556 - MIR3 SINE MIR -4 258 3 246 116 0 0 chr20 49563408 49563451 -22590431 + (A)n Simple_repeat Simple_repeat 1 43 0 3150 173 18 14 chr20 49563451 49564053 -22589829 - L1 LINE L1 -1527 4619 4013 2550 117 11 13 chr20 49564053 49564429 -22589453 - THE1C LTR MaLR 0 375 1 3150 173 18 14 chr20 49564429 49564450 -22589432 - L1 LINE L1 -2133 4013 3994 * 4837 163 54 28 chr20 49564449 49565528 -22588354 + L1 LINE L1 3137 4243 -1903 974 302 113 22 chr20 49565740 49566561 -22587321 + L2 LINE L2 2409 3311 -2 247 250 0 0 chr20 49566765 49566821 -22587061 + L2 LINE L2 3201 3256 -16 896 261 84 45 chr20 49567184 49567541 -22586341 - L2 LINE L2 -4 3309 2939 1433 196 4 0 chr20 49567543 49567823 -22586059 + AluJb SINE Alu 20 300 -12 1626 201 10 0 chr20 49567828 49568136 -22585746 + AluJo SINE Alu 1 311 -1 430 287 194 20 chr20 49568141 49568388 -22585494 + L3 LINE CR1 591 880 -697 24 0 0 0 chr20 49569955 49569979 -22583903 + AT_rich Low_complexity Low_complexity 1 24 0 866 215 0 11 chr20 49570697 49570883 -22582999 + FRAM SINE Alu 1 176 0 250 222 40 91 chr20 49571726 49571825 -22582057 - L1MC/D LINE L1 -2027 5781 5688 345 179 90 15 chr20 49571827 49571894 -22581988 + Tigger7 DNA MER2_type 1 72 -633 2393 129 22 67 chr20 49571894 49572345 -22581537 + Tigger7 DNA MER2_type 2156 2586 -1 584 295 86 33 chr20 49572351 49572771 -22581111 - L1MC/D LINE L1 -423 5698 5257 333 364 98 40 chr20 49573874 49574171 -22579711 + L2 LINE L2 2955 3268 -4 189 0 0 0 chr20 49574194 49574215 -22579667 + (CA)n Simple_repeat Simple_repeat 1 21 0 551 225 56 44 chr20 49574453 49574613 -22579269 - MER58B DNA MER1_type 0 341 180 430 243 39 19 chr20 49574801 49574904 -22578978 - MER91C DNA MER1_type 0 140 36 234 298 106 0 chr20 49576023 49576117 -22577765 - L2 LINE L2 0 3272 3169 1710 179 0 10 chr20 49576133 49576434 -22577448 + AluJb SINE Alu 1 298 -14 1515 172 12 43 chr20 49576581 49576906 -22576976 + MER33 DNA MER1_type 1 315 -9 226 321 25 0 chr20 49577458 49577539 -22576343 - MIR SINE MIR -19 243 161 570 213 88 7 chr20 49577640 49577776 -22576106 + MER117 DNA MER1_type 1 147 -50 469 302 189 36 chr20 49577890 49578277 -22575605 + L3 LINE CR1 887 1332 -245 370 333 22 7 chr20 49578293 49578431 -22575451 + LTR33 LTR ERVL 6 145 -376 1752 166 0 13 chr20 49578653 49578955 -22574927 - AluJb SINE Alu -14 298 1 335 221 52 0 chr20 49578956 49579033 -22574849 + LTR33 LTR ERVL 431 511 -10 466 254 127 52 chr20 49579043 49579256 -22574626 - L2 LINE L2 -75 3238 3010 236 375 36 18 chr20 49579330 49579442 -22574440 + L3 LINE CR1 1391 1504 -73 330 267 144 0 chr20 49579866 49579956 -22573926 - MER5B DNA MER1_type -3 175 73 222 400 0 0 chr20 49580131 49580221 -22573661 - MER5A DNA MER1_type -54 135 46 380 335 10 36 chr20 49580687 49580758 -22573124 - MIR SINE MIR -40 222 151 442 70 127 28 chr20 49580758 49580829 -22573053 - MADE1 DNA Mariner -2 78 1 380 335 10 36 chr20 49580829 49580951 -22572931 - MIR SINE MIR -111 151 34 292 348 26 17 chr20 49581114 49581229 -22572653 - L2 LINE L2 0 3272 3157 482 294 82 11 chr20 49581237 49581421 -22572461 - MER117 DNA MER1_type 0 197 1 2218 110 0 0 chr20 49581737 49582045 -22571837 - AluY SINE Alu -3 308 1 7737 20 9 0 chr20 49582176 49583068 -22570814 - L1PA2 LINE L1 -2 6153 5254 367 180 0 0 chr20 49583079 49583140 -22570742 - MADE1 DNA Mariner -19 61 1 375 195 154 73 chr20 49583475 49583598 -22570284 + MER5B DNA MER1_type 1 133 -56 227 182 23 0 chr20 49583974 49584018 -22569864 + C-rich Low_complexity Low_complexity 3 47 0 355 359 8 8 chr20 49584116 49584247 -22569635 - L2 LINE L2 0 3313 3183 436 212 84 67 chr20 49584344 49584485 -22569397 - MIR SINE MIR -68 194 48 1140 248 118 22 chr20 49584485 49584892 -22568990 + MLT1J1 LTR MaLR 1 446 0 436 212 84 67 chr20 49584892 49584929 -22568953 - MIR SINE MIR -214 48 13 1596 158 27 34 chr20 49585459 49585757 -22568125 + AluSx SINE Alu 2 297 -15 419 248 31 31 chr20 49585815 49585944 -22567938 + MLT1L LTR MaLR 477 605 -10 196 240 20 0 chr20 49585960 49586010 -22567872 + MIR SINE MIR 98 148 -114 247 274 24 12 chr20 49586620 49586704 -22567178 - MIR SINE MIR -77 131 47 2037 120 3 0 chr20 49586709 49587009 -22566873 + AluSc SINE Alu 1 301 -8 831 269 178 7 chr20 49587481 49587779 -22566103 - LTR16C LTR ERVL -1 490 142 639 292 52 36 chr20 49587967 49588217 -22565665 + MIR SINE MIR 7 260 -2 525 269 23 29 chr20 49588219 49588390 -22565492 + MER91A DNA MER1_type 1 170 -26 221 226 81 0 chr20 49588412 49588474 -22565408 + MER91A DNA MER1_type 124 190 0 366 156 0 0 chr20 49590151 49590215 -22563667 + (CA)n Simple_repeat Simple_repeat 2 65 0 411 73 0 0 chr20 49590612 49590667 -22563215 + (CA)n Simple_repeat Simple_repeat 2 56 0 622 197 161 0 chr20 49590839 49590976 -22562906 - MLT1C LTR MaLR 0 467 309 2197 83 0 0 chr20 49591120 49591408 -22562474 + AluSg SINE Alu 13 300 -10 708 285 127 29 chr20 49591864 49592211 -22561671 + L2 LINE L2 2857 3237 -76 200 248 18 18 chr20 49592211 49592320 -22561562 + GA-rich Low_complexity Low_complexity 2 110 0 1246 126 17 65 chr20 49592364 49592594 -22561288 - MER20 DNA MER1_type 0 219 1 237 289 82 0 chr20 49592723 49592820 -22561062 - MLT1H LTR MaLR -11 538 434 326 297 0 0 chr20 49593419 49593510 -22560372 - L2 LINE L2 -5 3267 3177 24 0 0 0 chr20 49593907 49593931 -22559951 + AT_rich Low_complexity Low_complexity 1 24 0 306 0 0 0 chr20 49593972 49594006 -22559876 + (TTA)n Simple_repeat Simple_repeat 2 35 0 735 217 16 112 chr20 49594008 49594257 -22559625 - MIR SINE MIR -6 256 32 199 298 35 0 chr20 49594233 49594290 -22559592 + L2 LINE L2 3213 3271 -1 * 556 334 38 52 chr20 49594481 49594901 -22558981 - L2 LINE L2 -191 3081 2670 204 67 0 0 chr20 49595893 49595923 -22557959 + (GA)n Simple_repeat Simple_repeat 1 30 0 246 32 0 0 chr20 49595923 49595954 -22557928 + (TG)n Simple_repeat Simple_repeat 1 31 0 219 372 21 11 chr20 49596326 49596420 -22557462 + MIR SINE MIR 17 111 -97 221 286 12 36 chr20 49596450 49596534 -22557348 + MIR3 SINE MIR 5 86 -122 354 224 318 0 chr20 49596680 49596787 -22557095 + MIR SINE MIR 36 176 -86 8438 174 16 21 chr20 49598457 49599950 -22553932 + L1M1 LINE L1 23 1507 -6058 1152 227 29 26 chr20 49600377 49600650 -22553232 - LTR16C LTR ERVL -2 489 216 1901 206 79 63 chr20 49600662 49601153 -22552729 + MLT1D LTR MaLR 7 505 0 290 262 198 27 chr20 49601153 49601335 -22552547 - LTR16C LTR ERVL -271 220 7 427 225 212 13 chr20 49603023 49603174 -22550708 + MER5A DNA MER1_type 9 189 0 204 40 0 0 chr20 49603690 49603715 -22550167 + (TTTA)n Simple_repeat Simple_repeat 3 27 0 342 0 0 0 chr20 49604094 49604132 -22549750 + (TG)n Simple_repeat Simple_repeat 2 39 0 222 222 283 20 chr20 49604979 49605078 -22548804 + L2 LINE L2 3181 3305 -8 432 200 30 0 chr20 49605222 49605322 -22548560 + MER117 DNA MER1_type 61 163 -34 378 317 104 43 chr20 49605915 49606145 -22547737 + L2 LINE L2 2900 3143 -129 1131 203 5 0 chr20 49606179 49606386 -22547496 - MER58A DNA MER1_type -8 216 9 260 191 138 30 chr20 49607689 49607797 -22546085 + MLT1I LTR MaLR 285 554 -13 1586 229 163 29 chr20 49608461 49608945 -22544937 + MLT1H LTR MaLR 1 549 0 3961 158 17 39 chr20 49608971 49609720 -22544162 + L1MB3 LINE L1 5444 6176 -7 512 298 185 18 chr20 49609923 49610323 -22543559 - MLT1K LTR MaLR 0 588 122 268 321 201 14 chr20 49610464 49610673 -22543209 + MIR SINE MIR 2 249 -13 445 206 10 10 chr20 49610871 49610968 -22542914 - MER96 DNA MER1_type? -2 173 77 199 246 112 79 chr20 49610979 49611160 -22542722 - MER5B DNA MER1_type -3 175 6 2250 111 0 10 chr20 49611426 49611723 -22542159 - AluSg SINE Alu -16 294 1 327 134 183 0 chr20 49612272 49612354 -22541528 + L1MA8 LINE L1 6194 6290 -1 242 203 34 0 chr20 49613484 49613543 -22540339 + (TTA)n Simple_repeat Simple_repeat 3 63 0 577 199 13 26 chr20 49614649 49614967 -22538915 + CT-rich Low_complexity Low_complexity 1 313 0 570 328 47 0 chr20 49615188 49615380 -22538502 + MIR SINE MIR 11 211 -51 244 272 147 60 chr20 49615358 49615542 -22538340 - MIR SINE MIR -31 231 32 * 285 336 87 54 chr20 49615575 49615873 -22538009 + L2 LINE L2 2934 3241 -31 301 261 38 9 chr20 49615874 49616088 -22537794 + GA-rich Low_complexity Low_complexity 1 220 0 524 209 0 35 chr20 49616152 49616324 -22537558 + GA-rich Low_complexity Low_complexity 4 169 0 287 242 135 59 chr20 49617388 49617607 -22536275 - MIR SINE MIR 0 262 19 299 341 106 6 chr20 49618234 49618404 -22535478 + MER117 DNA MER1_type 11 197 0 464 264 125 14 chr20 49619336 49619480 -22534402 - MER5B DNA MER1_type -2 176 17 847 257 158 20 chr20 49619529 49619922 -22533960 + MLT1J2 LTR MaLR 1 447 -3 930 262 120 40 chr20 49620176 49620600 -22533282 + L2 LINE L2 2855 3312 -1 235 371 57 0 chr20 49620782 49620887 -22532995 + MER91C DNA MER1_type 30 140 0 299 338 205 5 chr20 49622139 49622267 -22531615 + MIR SINE MIR 10 111 -151 1268 225 152 46 chr20 49622267 49622720 -22531162 + MLT1D LTR MaLR 5 505 0 299 338 205 5 chr20 49622720 49622801 -22531081 + MIR SINE MIR 111 261 -1 583 198 0 24 chr20 49622837 49623087 -22530795 + (CACCAT)n Simple_repeat Simple_repeat 1 244 0 239 289 134 45 chr20 49624103 49624304 -22529578 - L2 LINE L2 -143 3129 2911 210 267 233 0 chr20 49624445 49624535 -22529347 - MIR SINE MIR -140 122 12 243 0 0 0 chr20 49625845 49625872 -22528010 + (TG)n Simple_repeat Simple_repeat 2 28 0 224 333 28 7 chr20 49625980 49626121 -22527761 + (TATATG)n Simple_repeat Simple_repeat 6 149 0 * 227 293 5 53 chr20 49626028 49626263 -22527619 + (TATG)n Simple_repeat Simple_repeat 1 223 0 587 325 15 10 chr20 49626291 49626488 -22527394 + MIR SINE MIR 29 226 -36 451 194 94 9 chr20 49627215 49627332 -22526550 - MER33 DNA MER1_type -265 59 1 199 296 56 0 chr20 49628028 49628082 -22525800 - MIR SINE MIR -62 146 90 186 333 0 0 chr20 49628073 49628124 -22525758 + L2 LINE L2 3263 3313 0 * 647 150 39 31 chr20 49628283 49628410 -22525472 - FRAM SINE Alu -8 168 41 1938 157 10 3 chr20 49628445 49628750 -22525132 - AluJb SINE Alu -5 307 1 532 290 11 23 chr20 49628885 49629061 -22524821 + MIR SINE MIR 14 187 -75 335 217 132 9 chr20 49629109 49629215 -22524667 - L2 LINE L2 -7 3306 3188 180 62 42 42 chr20 49629279 49629327 -22524555 + (TCCC)n Simple_repeat Simple_repeat 3 50 0 351 0 0 0 chr20 49629743 49629782 -22524100 + (CA)n Simple_repeat Simple_repeat 2 40 0 207 88 0 0 chr20 49629782 49629816 -22524066 + (GA)n Simple_repeat Simple_repeat 1 34 0 363 307 20 0 chr20 49630501 49630602 -22523280 + MIR SINE MIR 40 142 -66 1730 134 25 147 chr20 49630642 49630744 -22523138 + MLT1B LTR MaLR 4 117 -273 1883 134 22 0 chr20 49630744 49631052 -22522830 + AluJo SINE Alu 1 314 0 2113 123 0 40 chr20 49631052 49631376 -22522506 + AluSx SINE Alu 2 312 0 1730 134 25 147 chr20 49631376 49631711 -22522171 + MLT1B LTR MaLR 115 390 0 2021 169 36 11 chr20 49632077 49632433 -22521449 - MLT1A1 LTR MaLR 0 365 1 2206 114 7 0 chr20 49632466 49632763 -22521119 - AluSx SINE Alu -13 299 1 330 342 40 30 chr20 49633415 49633614 -22520268 + L2 LINE L2 2880 3080 -192 551 301 21 27 chr20 49633767 49633953 -22519929 - MIR SINE MIR -70 192 8 250 170 19 19 chr20 49634624 49634677 -22519205 + GA-rich Low_complexity Low_complexity 2 54 0 284 284 49 0 chr20 49636134 49636215 -22517667 + MER91C DNA MER1_type 55 139 -1 499 293 149 0 chr20 49636456 49636657 -22517225 + MIR SINE MIR 29 259 -3 22 0 0 0 chr20 49636725 49636747 -22517135 + AT_rich Low_complexity Low_complexity 1 22 0 1652 207 3 7 chr20 49636789 49637094 -22516788 + AluJo SINE Alu 1 304 -8 428 295 54 30 chr20 49637433 49637599 -22516283 + L2 LINE L2 3144 3313 0 341 236 135 0 chr20 49637600 49637689 -22516193 - MIR SINE MIR -89 173 73 262 322 141 34 chr20 49637740 49637889 -22515993 - MIR SINE MIR -21 241 77 1153 203 42 89 chr20 49638435 49638663 -22515219 - MER2 DNA MER2_type 0 344 138 2378 96 3 3 chr20 49638663 49638966 -22514916 + AluSx SINE Alu 1 303 -9 1153 203 42 89 chr20 49638966 49639097 -22514785 - MER2 DNA MER2_type -206 138 2 409 244 17 96 chr20 49639125 49639355 -22514527 - L1MC4a LINE L1 -1879 5929 5718 1564 178 45 65 chr20 49639605 49639987 -22513895 - MLT1A2 LTR MaLR 0 374 1 1821 174 16 7 chr20 49640077 49640382 -22513500 + AluSx SINE Alu 1 308 -4 320 283 113 0 chr20 49641138 49641261 -22512621 - MIR SINE MIR -59 149 50 956 251 121 72 chr20 49641265 49641600 -22512282 - L2 LINE L2 0 3313 2938 2100 134 0 0 chr20 49641600 49641890 -22511992 + AluSx SINE Alu 3 292 -20 956 251 121 72 chr20 49641890 49642156 -22511726 - L2 LINE L2 -375 2938 2686 857 246 161 22 chr20 49642950 49643360 -22510522 + LTR33 LTR ERVL 22 488 -33 490 171 198 0 chr20 49643479 49643590 -22510292 - MER45 DNA AcHobo -818 135 3 296 291 48 44 chr20 49643590 49643841 -22510041 + L2 LINE L2 558 809 -2505 208 379 16 0 chr20 49643832 49643956 -22509926 - L3 LINE CR1 -151 1426 1301 * 1355 176 77 0 chr20 49643998 49644271 -22509611 + MLT1D LTR MaLR 212 505 0 2127 121 30 0 chr20 49644368 49644665 -22509217 - AluSx SINE Alu -6 306 1 267 215 0 122 chr20 49644688 49644795 -22509087 + MIR SINE MIR 169 262 0 1102 178 48 10 chr20 49644833 49645041 -22508841 + MER20 DNA MER1_type 4 219 0 219 300 62 0 chr20 49645305 49645385 -22508497 - MIR SINE MIR -70 192 108 238 352 0 38 chr20 49645601 49645706 -22508176 + MER5B DNA MER1_type 1 101 -77 474 191 248 7 chr20 49646106 49646247 -22507635 + MER5B DNA MER1_type 1 175 -3 481 250 152 37 chr20 49646253 49646417 -22507465 + MER5A DNA MER1_type 4 186 -3 2062 117 4 0 chr20 49646447 49646753 -22507129 + AluSx SINE Alu 1 307 0 695 297 98 60 chr20 49646909 49647055 -22506827 - L2 LINE L2 -25 3288 3149 1812 180 20 0 chr20 49647055 49647361 -22506521 + AluSx SINE Alu 1 312 0 695 297 98 60 chr20 49647361 49647408 -22506474 - L2 LINE L2 -164 3149 3105 2124 122 32 35 chr20 49647408 49647784 -22506098 - THE1C LTR MaLR 0 375 1 695 297 98 60 chr20 49647784 49648002 -22505880 - L2 LINE L2 -208 3105 2897 2457 52 0 23 chr20 49648002 49648310 -22505572 + AluY SINE Alu 1 301 -10 695 297 98 60 chr20 49648310 49648508 -22505374 - L2 LINE L2 -416 2897 2660 189 279 33 49 chr20 49648532 49648593 -22505289 + MIR SINE MIR 26 85 -177 1749 145 0 11 chr20 49648632 49648901 -22504981 + AluJo SINE Alu 35 300 -12 1180 129 89 71 chr20 49649527 49649593 -22504289 + MER30 DNA MER1_type 1 64 -166 2302 81 0 34 chr20 49649593 49649889 -22503993 + AluSx SINE Alu 9 294 -18 1180 129 89 71 chr20 49649889 49649939 -22503943 + MER30 DNA MER1_type 64 112 -118 189 0 0 0 chr20 49649939 49649960 -22503922 + (TA)n Simple_repeat Simple_repeat 1 21 0 1180 129 89 71 chr20 49649960 49650067 -22503815 + MER30 DNA MER1_type 112 229 -1 252 261 36 91 chr20 49650121 49650176 -22503706 - L1MC/D LINE L1 -2357 5451 5395 1466 202 111 65 chr20 49650176 49650672 -22503210 - MLT2B1 LTR ERVL -1 519 1 252 261 36 91 chr20 49650672 49650781 -22503101 - L1MC/D LINE L1 -2413 5395 5296 1919 159 13 17 chr20 49650847 49651149 -22502733 - AluJo SINE Alu -11 301 1 307 346 28 28 chr20 49651294 49651473 -22502409 - L1MC/D LINE L1 -1095 5051 4873 309 259 54 60 chr20 49651504 49651689 -22502193 - L1MC/D LINE L1 -1330 4816 4633 324 298 8 38 chr20 49652565 49652696 -22501186 + (TATG)n Simple_repeat Simple_repeat 2 128 0 1789 174 56 0 chr20 49652794 49653081 -22500801 + AluJb SINE Alu 1 303 -9 596 274 38 27 chr20 49653144 49653372 -22500510 + L1ME1 LINE L1 5947 6334 0 335 240 30 50 chr20 49653583 49653683 -22500199 - MIR SINE MIR -96 166 69 1407 224 74 54 chr20 49654551 49655051 -22498831 + MLT2B1 LTR ERVL 1 510 -10 595 317 128 7 chr20 49655250 49655540 -22498342 + MLT1K LTR MaLR 17 341 -247 901 182 7 0 chr20 49655572 49655726 -22498156 + FRAM SINE Alu 1 155 -11 856 133 0 22 chr20 49656807 49656942 -22496940 - FLAM_C SINE Alu 0 133 2 201 147 0 0 chr20 49657021 49657055 -22496827 + (CA)n Simple_repeat Simple_repeat 1 34 0 1500 217 60 78 chr20 49657733 49658281 -22495601 + MLT1F1 LTR MaLR 1 563 -4 1446 216 85 71 chr20 49658409 49658927 -22494955 - MLT1H LTR MaLR -13 536 12 2434 85 0 0 chr20 49660066 49660361 -22493521 + AluSx SINE Alu 1 295 -17 1614 147 0 113 chr20 49660433 49660759 -22493123 + AluJo SINE Alu 1 289 -23 2080 118 0 33 chr20 49660864 49661170 -22492712 - AluSq SINE Alu -17 296 1 1183 236 23 12 chr20 49661226 49661485 -22492397 - MIR SINE MIR 0 262 1 542 207 18 0 chr20 49662208 49662319 -22491563 + MER106A DNA MER1_type 3 115 -121 696 111 0 0 chr20 49662321 49662411 -22491471 + AluS SINE Alu 2 91 -222 525 124 106 26 chr20 49662445 49662558 -22491324 - MLT1C LTR MaLR -345 122 1 2021 131 45 0 chr20 49662584 49663059 -22490823 + AluSx SINE Alu 1 488 0 347 59 0 20 chr20 49663064 49663115 -22490767 + (GAAA)n Simple_repeat Simple_repeat 4 53 0 591 215 26 71 chr20 49663169 49663380 -22490502 + LTR33 LTR ERVL 315 518 -3 905 221 51 97 chr20 49663460 49663655 -22490227 + L1ME3 LINE L1 5532 5735 -435 1852 151 28 3 chr20 49663655 49663775 -22490107 + AluSx SINE Alu 2 118 -194 216 0 0 0 chr20 49663775 49663799 -22490083 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1852 151 28 3 chr20 49663799 49663963 -22489919 + AluSx SINE Alu 118 293 -19 1228 46 0 0 chr20 49663966 49664117 -22489765 + L1PA8 LINE L1 6021 6171 -1 905 221 51 97 chr20 49664117 49664369 -22489513 + L1ME3 LINE L1 5737 5962 -208 227 185 19 56 chr20 49664437 49664814 -22489068 + L1MC2 LINE L1 6149 6539 -1443 2355 63 3 3 chr20 49664814 49665098 -22488784 - AluY SINE Alu -11 300 17 227 185 19 56 chr20 49665098 49665116 -22488766 + L1MC2 LINE L1 6539 7981 -1 326 275 156 6 chr20 49665137 49665297 -22488585 + L1ME3 LINE L1 5971 6154 -8 2181 112 3 13 chr20 49665325 49665630 -22488252 + AluSx SINE Alu 1 302 -10 410 292 73 23 chr20 49665817 49666036 -22487846 - L1MC4a LINE L1 -1877 5931 5702 1139 199 34 19 chr20 49666211 49666473 -22487409 - L1MB4 LINE L1 -1 6179 5914 2231 96 4 0 chr20 49666503 49666817 -22487065 - AluSq SINE Alu 0 315 1 2263 100 7 7 chr20 49667730 49668029 -22485853 - AluSx SINE Alu -13 299 1 25 0 0 0 chr20 49668207 49668232 -22485650 + AT_rich Low_complexity Low_complexity 1 25 0 369 286 225 4 chr20 49668730 49669006 -22484876 - L3 LINE CR1 -8 1569 1233 921 244 95 54 chr20 49669008 49669377 -22484505 - MLT1C LTR MaLR -1 466 83 2377 125 0 0 chr20 49669400 49669712 -22484170 - AluSx SINE Alu 0 312 1 189 0 0 0 chr20 49669723 49669744 -22484138 + (A)n Simple_repeat Simple_repeat 1 21 0 217 283 17 0 chr20 49669806 49669866 -22484016 - L3 LINE CR1 -343 1234 1174 223 320 40 16 chr20 49669908 49670033 -22483849 - L3 LINE CR1 -1051 526 399 272 250 62 31 chr20 49670067 49670163 -22483719 + MIR SINE MIR 70 168 -94 1022 185 6 0 chr20 49670875 49671037 -22482845 - FRAM SINE Alu -3 163 1 210 333 17 50 chr20 49671374 49671494 -22482388 - L2 LINE L2 -59 3254 3139 564 313 62 0 chr20 49671581 49671773 -22482109 - L2 LINE L2 -195 3118 2915 550 326 17 6 chr20 49671757 49671929 -22481953 - MER5A DNA MER1_type -9 180 7 * 511 283 36 24 chr20 49672328 49672494 -22481388 + MIR SINE MIR 11 178 -84 2161 142 0 0 chr20 49672756 49673066 -22480816 + AluSx SINE Alu 1 310 -2 532 241 159 36 chr20 49674300 49674463 -22479419 + MIR SINE MIR 16 214 -48 2044 201 29 36 chr20 49674463 49674990 -22478892 + Charlie1b DNA MER1_type 1 523 0 532 241 159 36 chr20 49674990 49675046 -22478836 + MIR SINE MIR 214 262 0 387 175 44 35 chr20 49675476 49675590 -22478292 - MER74B LTR ERVL 0 622 508 707 172 15 0 chr20 49676708 49676842 -22477040 + FRAM SINE Alu 40 175 -1 407 142 123 28 chr20 49677037 49677143 -22476739 - MLT1G LTR MaLR -67 500 348 699 229 63 5 chr20 49677181 49677410 -22476472 - MLT1G LTR MaLR -279 276 20 1736 156 19 42 chr20 49677444 49677752 -22476130 - AluJo SINE Alu -11 301 1 232 102 41 20 chr20 49678994 49679043 -22474839 + GA-rich Low_complexity Low_complexity 1 50 0 281 271 52 12 chr20 49679054 49679170 -22474712 - MIR SINE MIR -58 150 42 963 192 54 43 chr20 49679170 49679446 -22474436 + L1ME1 LINE L1 5883 6161 -5 1014 96 0 0 chr20 49679712 49679837 -22474045 + FLAM_C SINE Alu 16 140 -3 2348 87 0 0 chr20 49681205 49681492 -22472390 - AluSc SINE Alu 0 309 23 282 320 53 19 chr20 49681825 49682031 -22471851 - L1P5 LINE L1 -688 5468 5256 2372 58 41 3 chr20 49682128 49682421 -22471461 + AluY SINE Alu 1 304 -7 1489 145 179 0 chr20 49682518 49682780 -22471102 + AluJb SINE Alu 1 309 -3 2407 107 0 0 chr20 49684330 49684638 -22469244 + AluSx SINE Alu 1 308 -4 196 286 22 55 chr20 49684995 49685086 -22468796 - MER5A DNA MER1_type -24 165 78 186 363 157 10 chr20 49688409 49688511 -22465371 - L2 LINE L2 -19 3253 3137 2491 86 0 3 chr20 49689711 49690024 -22463858 - AluSx SINE Alu 0 312 1 26 0 0 0 chr20 49690614 49690640 -22463242 + AT_rich Low_complexity Low_complexity 1 26 0 713 248 107 30 chr20 49690702 49690964 -22462918 - MER102b DNA MER1_type -3 338 57 251 356 61 8 chr20 49690964 49691096 -22462786 + L1MEc LINE L1 45 183 -6213 2315 120 0 0 chr20 49691096 49691404 -22462478 + AluSx SINE Alu 1 308 -4 832 133 8 0 chr20 49691413 49691533 -22462349 + AluJb SINE Alu 6 126 -186 1934 110 9 95 chr20 49691550 49691877 -22462005 + AluSx SINE Alu 1 299 -13 289 232 111 40 chr20 49692364 49692463 -22461419 - MIR SINE MIR -29 233 128 405 239 194 0 chr20 49692624 49692758 -22461124 + L1ME2 LINE L1 5998 6157 -7 1693 155 19 4 chr20 49693225 49693496 -22460386 - AluJo SINE Alu -23 289 15 766 229 53 0 chr20 49693664 49693834 -22460048 - MER5A DNA MER1_type -8 181 3 237 232 20 40 chr20 49693931 49693996 -22459886 - MER5C DNA MER1_type 0 324 260 2047 113 44 0 chr20 49693996 49694271 -22459611 + AluSx SINE Alu 1 287 -25 237 232 20 40 chr20 49694271 49694304 -22459578 - MER5C DNA MER1_type -64 260 228 669 223 118 32 chr20 49694332 49694552 -22459330 - MER5C DNA MER1_type -69 255 17 402 321 94 55 chr20 49694572 49694831 -22459051 + L2 LINE L2 2898 3176 -96 2257 114 0 10 chr20 49694831 49695137 -22458745 + AluSx SINE Alu 1 303 -9 402 321 94 55 chr20 49695137 49695238 -22458644 + L2 LINE L2 3176 3272 0 2369 101 3 0 chr20 49695289 49695587 -22458295 - AluSx SINE Alu -13 299 1 2346 101 3 0 chr20 49696189 49696487 -22457395 + AluSp SINE Alu 1 299 -14 349 352 95 0 chr20 49696876 49697055 -22456827 + L3 LINE CR1 688 883 -694 424 310 66 54 chr20 49698526 49698669 -22455213 - L1ME LINE L1 -386 5735 5586 541 218 115 6 chr20 49698669 49698825 -22455057 + MER104 DNA MER2_type 5 177 -3 424 310 66 54 chr20 49698825 49698923 -22454959 - L1ME LINE L1 -535 5586 5491 21 71 0 0 chr20 49699058 49699100 -22454782 + AT_rich Low_complexity Low_complexity 1 42 0 892 146 0 55 chr20 49699328 49699492 -22454390 + MER106B DNA MER1_type 2 156 -903 666 270 44 15 chr20 49700115 49700319 -22453563 + MIR SINE MIR 43 252 -10 304 323 124 27 chr20 49700406 49700592 -22453290 + MIR SINE MIR 18 221 -41 21 0 0 0 chr20 49700735 49700756 -22453126 + AT_rich Low_complexity Low_complexity 1 21 0 1611 166 71 17 chr20 49702816 49703111 -22450771 + AluJo SINE Alu 2 312 0 458 273 80 21 chr20 49703131 49703318 -22450564 + MIR SINE MIR 3 200 -62 536 310 109 44 chr20 49703892 49704012 -22449870 + MIR SINE MIR 7 118 -144 2039 94 32 14 chr20 49704012 49704311 -22449571 + AluSx SINE Alu 1 304 0 536 310 109 44 chr20 49704311 49704418 -22449464 + MIR SINE MIR 118 250 -12 1168 168 69 0 chr20 49704772 49704975 -22448907 + AluJb SINE Alu 87 303 -9 2320 107 3 16 chr20 49705505 49705814 -22448068 + AluSx SINE Alu 1 305 -7 4531 133 9 58 chr20 49706078 49706893 -22446989 + L1MA7 LINE L1 5514 6288 -3 3131 164 32 4 chr20 49706900 49707455 -22446427 + L1MB3 LINE L1 5594 6164 -19 2003 122 109 3 chr20 49708273 49708593 -22445289 + THE1B LTR MaLR 1 354 -10 2642 154 27 63 chr20 49709237 49710057 -22443825 + L1MB8 LINE L1 4947 5843 -335 1986 147 83 57 chr20 49710057 49710478 -22443404 + MSTB1 LTR MaLR 1 432 0 2642 154 27 63 chr20 49710478 49710803 -22443079 + L1MB8 LINE L1 5843 6178 0 633 90 0 0 chr20 49710966 49711044 -22442838 + MADE1 DNA Mariner 3 80 0 204 338 38 31 chr20 49711676 49711836 -22442046 + L2 LINE L2 2899 3059 -213 188 250 62 0 chr20 49712191 49712239 -22441643 - L2 LINE L2 -5 3267 3217 439 265 98 8 chr20 49712405 49712537 -22441345 - MIR3 SINE MIR -63 145 2 275 310 53 0 chr20 49713123 49713236 -22440646 - L1ME LINE L1 -308 5813 5695 25 51 0 0 chr20 49713365 49713404 -22440478 + AT_rich Low_complexity Low_complexity 1 39 0 2142 117 0 3 chr20 49713643 49713934 -22439948 + AluSx SINE Alu 7 296 -16 2310 106 0 3 chr20 49714199 49714502 -22439380 - AluSx SINE Alu -10 302 1 1990 132 7 16 chr20 49714827 49715137 -22438745 + AluSx SINE Alu 1 307 -5 28 79 0 0 chr20 49715198 49715261 -22438621 + AT_rich Low_complexity Low_complexity 1 63 0 30 69 0 0 chr20 49715354 49715412 -22438470 + AT_rich Low_complexity Low_complexity 1 58 0 256 245 53 11 chr20 49715522 49715616 -22438266 + L1ME LINE L1 5569 5666 -455 234 298 125 10 chr20 49715677 49715781 -22438101 + L2 LINE L2 2920 3035 -237 2630 182 94 2 chr20 49718027 49718572 -22435310 + L1MB5 LINE L1 5572 6166 -8 313 309 145 34 chr20 49719026 49719233 -22434649 + L2 LINE L2 3041 3270 -2 430 329 24 18 chr20 49719493 49719660 -22434222 + L2 LINE L2 3105 3272 0 441 240 170 21 chr20 49720469 49720636 -22433246 + MIR SINE MIR 38 228 -34 621 270 37 108 chr20 49720704 49721254 -22432628 - L2 LINE L2 0 3313 2726 38 68 0 0 chr20 49721295 49721368 -22432514 + AT_rich Low_complexity Low_complexity 1 73 0 310 228 88 26 chr20 49721415 49721529 -22432353 - MIR SINE MIR -108 154 34 2511 50 0 10 chr20 49722103 49722401 -22431481 + AluY SINE Alu 1 295 -16 302 336 82 8 chr20 49726421 49726555 -22427327 + MIR SINE MIR 110 253 -9 2024 107 28 10 chr20 49727376 49727667 -22426215 + AluSq SINE Alu 1 296 -17 2005 140 0 0 chr20 49729097 49729421 -22424461 + AluSx SINE Alu 1 324 0 25 31 0 0 chr20 49729474 49729506 -22424376 + AT_rich Low_complexity Low_complexity 1 32 0 308 322 98 28 chr20 49729837 49730092 -22423790 + L2 LINE L2 2595 2867 -447 1045 270 160 18 chr20 49730094 49730551 -22423331 - L2 LINE L2 -4 3309 2794 243 312 32 71 chr20 49730599 49730753 -22423129 + L2 LINE L2 2948 3095 -177 2316 105 3 0 chr20 49730929 49731225 -22422657 - AluSq SINE Alu -16 297 1 23 0 0 0 chr20 49731885 49731908 -22421974 + AT_rich Low_complexity Low_complexity 1 23 0 296 298 78 54 chr20 49732061 49732303 -22421579 + L1ME4a LINE L1 5312 5559 -562 208 100 25 25 chr20 49732346 49732386 -22421496 + (TAA)n Simple_repeat Simple_repeat 2 41 0 445 324 125 17 chr20 49732408 49732584 -22421298 + MER91A DNA MER1_type 1 195 -1 535 246 0 0 chr20 49732658 49732768 -22421114 + MER3 DNA MER1_type 7 116 -93 183 80 0 0 chr20 49732768 49732793 -22421089 + (A)n Simple_repeat Simple_repeat 1 25 0 2315 95 3 19 chr20 49732803 49733119 -22420763 + AluSp SINE Alu 1 311 -2 432 232 0 10 chr20 49733119 49733218 -22420664 + MER3 DNA MER1_type 99 196 -13 299 98 0 131 chr20 49733185 49733246 -22420636 - MER3 DNA MER1_type -116 93 41 * 340 198 10 5 chr20 49733247 49733350 -22420532 - MIR SINE MIR -106 156 4 363 191 99 43 chr20 49733408 49733549 -22420333 + L1MC5 LINE L1 7783 7931 -30 * 972 246 130 19 chr20 49733545 49733826 -22420056 + L1ME4a LINE L1 5653 5998 -123 267 54 0 0 chr20 49733826 49733863 -22420019 + (CA)n Simple_repeat Simple_repeat 2 38 0 972 246 130 19 chr20 49733863 49734003 -22419879 + L1ME4a LINE L1 5998 6121 0 1062 227 15 27 chr20 49735459 49735653 -22418229 + MIR SINE MIR 6 198 -64 1544 170 122 19 chr20 49735653 49735964 -22417918 + MER2 DNA MER2_type 2 344 0 1062 227 15 27 chr20 49735964 49736029 -22417853 + MIR SINE MIR 198 262 0 313 368 68 15 chr20 49736885 49737018 -22416864 + MIR3 SINE MIR 42 181 -27 2362 65 3 53 chr20 49737055 49737377 -22416505 + AluY SINE Alu 1 306 -5 2175 133 0 0 chr20 49737818 49738120 -22415762 - AluSx SINE Alu -10 302 1 2006 104 47 13 chr20 49738934 49739233 -22414649 + AluSx SINE Alu 1 309 -3 245 26 0 51 chr20 49739905 49739944 -22413938 + L1MA2 LINE L1 6264 6300 -4 27 0 0 0 chr20 49740098 49740125 -22413757 + AT_rich Low_complexity Low_complexity 1 27 0 341 290 78 56 chr20 49740279 49740510 -22413372 - MIR SINE MIR -15 247 12 1786 141 48 17 chr20 49741072 49741363 -22412519 - AluJo SINE Alu -8 304 5 377 234 75 0 chr20 49741416 49741523 -22412359 + HAL1b LINE L1 397 511 -837 1361 243 161 29 chr20 49741564 49742222 -22411660 + HAL1b LINE L1 604 1348 0 2286 111 0 7 chr20 49742258 49742565 -22411317 + AluSg SINE Alu 1 305 -5 335 339 8 34 chr20 49742905 49743023 -22410859 - MIR SINE MIR -64 144 30 2063 117 28 3 chr20 49743252 49743542 -22410340 + AluSx SINE Alu 4 300 -12 249 98 24 0 chr20 49743670 49743711 -22410171 + L1ME4a LINE L1 6080 6121 0 6249 199 97 55 chr20 49743724 49744500 -22409382 + L1MC4a LINE L1 5951 6693 -1115 2365 101 0 3 chr20 49744500 49744807 -22409075 - AluSx SINE Alu -6 306 1 6249 199 97 55 chr20 49744807 49745812 -22408070 + L1MC4a LINE L1 6693 7806 -2 653 238 48 12 chr20 49745968 49746136 -22407746 - MIR SINE MIR 0 262 89 631 248 96 32 chr20 49747073 49747305 -22406577 + L1MC/D LINE L1 5580 5820 -398 * 3386 163 30 11 chr20 49747285 49747953 -22405929 + L1MA6 LINE L1 4652 5332 -814 6124 132 19 10 chr20 49749033 49750006 -22403876 + L1MA6 LINE L1 5317 6297 -3 21 71 0 0 chr20 49750007 49750049 -22403833 + AT_rich Low_complexity Low_complexity 1 42 0 207 69 0 0 chr20 49750107 49750136 -22403746 + (CA)n Simple_repeat Simple_repeat 1 29 0 25 65 0 0 chr20 49750294 49750340 -22403542 + AT_rich Low_complexity Low_complexity 1 46 0 1087 248 90 16 chr20 49750530 49750852 -22403030 + MLT1I LTR MaLR 58 403 -6 429 248 18 28 chr20 49750925 49751034 -22402848 + MIR SINE MIR 105 212 -50 195 200 0 25 chr20 49751291 49751331 -22402551 - MER5B DNA MER1_type -37 141 103 1881 214 82 65 chr20 49752337 49752571 -22401311 + L1ME3A LINE L1 5559 5788 -382 977 216 18 31 chr20 49752571 49752798 -22401084 - MER58A DNA MER1_type 0 224 1 1881 214 82 65 chr20 49752798 49753162 -22400720 + L1ME3A LINE L1 5788 6167 -3 2120 122 0 13 chr20 49754157 49754468 -22399414 + AluSg SINE Alu 1 307 -3 740 268 34 30 chr20 49754490 49754755 -22399127 + L1MC4a LINE L1 5649 5914 -1894 518 246 8 0 chr20 49754870 49754992 -22398890 - LTR47B LTR ERVL -320 123 1 1991 123 3 7 chr20 49755091 49755398 -22398484 - AluSx SINE Alu 0 306 1 808 288 55 0 chr20 49755729 49755948 -22397934 - MIR SINE MIR -18 244 14 750 139 0 0 chr20 49756259 49756360 -22397522 + FLAM_C SINE Alu 15 115 -28 294 95 0 0 chr20 49756360 49756402 -22397480 + (CAGA)n Simple_repeat Simple_repeat 3 44 0 329 204 168 53 chr20 49756888 49757001 -22396881 + L1MC5 LINE L1 7805 7930 -31 2119 117 3 16 chr20 49757616 49757923 -22395959 + AluSx SINE Alu 1 303 -9 416 268 91 134 chr20 49758299 49758575 -22395307 - L2 LINE L2 -11 3302 3039 578 330 72 27 chr20 49758771 49759104 -22394778 + L3 LINE CR1 1140 1487 -90 2009 128 17 0 chr20 49759792 49760080 -22393802 - AluSx SINE Alu -19 293 1 541 202 216 14 chr20 49760343 49760551 -22393331 - MER112 DNA MER1_type -10 250 1 272 242 186 25 chr20 49760767 49760928 -22392954 + Charlie8 DNA MER1_type 68 254 -2163 199 291 165 16 chr20 49761136 49761263 -22392619 + MIR SINE MIR 106 251 -11 682 246 23 11 chr20 49761313 49761488 -22392394 - MER5B DNA MER1_type 0 178 2 189 324 98 73 chr20 49761653 49761739 -22392143 + L2 LINE L2 2657 2739 -533 2339 110 0 3 chr20 49761739 49762048 -22391834 + AluSc SINE Alu 1 308 -1 189 324 98 73 chr20 49762048 49762332 -22391550 + L2 LINE L2 2739 3051 -221 603 246 63 16 chr20 49762414 49762605 -22391277 - MIR SINE MIR -62 200 1 194 263 88 0 chr20 49763265 49763322 -22390560 + L2 LINE L2 3211 3272 0 612 273 147 5 chr20 49763478 49763676 -22390206 - MIR SINE MIR -14 248 23 207 208 62 83 chr20 49764536 49764632 -22389250 + MIR SINE MIR 96 189 -73 305 278 119 16 chr20 49764817 49764943 -22388939 - MER5A DNA MER1_type 0 189 51 260 339 93 0 chr20 49764854 49764972 -22388910 + MER5A DNA MER1_type 55 183 -6 * 188 324 14 27 chr20 49765179 49765253 -22388629 + MIR SINE MIR 10 82 -180 285 215 76 13 chr20 49765294 49765373 -22388509 + MIR SINE MIR 179 262 0 180 383 17 33 chr20 49765908 49766028 -22387854 + L2 LINE L2 3111 3228 -44 2164 122 6 6 chr20 49766346 49766658 -22387224 + AluSx SINE Alu 1 312 0 1559 108 9 0 chr20 49766750 49766962 -22386920 - AluSg/x SINE Alu -18 294 81 534 317 66 16 chr20 49766964 49767147 -22386735 - MIR3 SINE MIR -8 200 9 372 228 78 90 chr20 49767671 49767762 -22386120 - MLT1K LTR MaLR 0 588 498 2195 131 0 10 chr20 49767762 49768076 -22385806 + AluSq SINE Alu 1 311 -2 372 228 78 90 chr20 49768076 49768151 -22385731 - MLT1K LTR MaLR -90 498 424 495 301 31 31 chr20 49768281 49768507 -22385375 - MLT1K LTR MaLR -360 228 3 461 250 16 24 chr20 49768953 49769077 -22384805 + MER94 DNA DNA 1 123 -11 885 200 0 0 chr20 49769346 49769496 -22384386 - AluJb SINE Alu -17 295 146 324 155 106 84 chr20 49769908 49769988 -22383894 + L1MC5 LINE L1 7600 7686 -275 2348 97 7 0 chr20 49769988 49770288 -22383594 - AluSg SINE Alu -8 302 1 324 155 106 84 chr20 49770288 49770349 -22383533 + L1MC5 LINE L1 7686 7744 -217 216 247 21 93 chr20 49770458 49770555 -22383327 - MER5A DNA MER1_type -99 90 1 2919 7 0 0 chr20 49770656 49770966 -22382916 - AluYa5 SINE Alu -1 310 1 2722 35 0 6 chr20 49770979 49771292 -22382590 - AluY SINE Alu 0 311 1 284 253 63 0 chr20 49771408 49771503 -22382379 - MER103 DNA DNA -48 118 18 834 184 0 0 chr20 49771592 49771717 -22382165 + AluJo/FLAM SINE Alu 1 125 -187 457 160 27 0 chr20 49771719 49771794 -22382088 + AluJ/FRAM SINE Alu 224 300 -12 2409 86 13 13 chr20 49771843 49772156 -22381726 - AluSp SINE Alu 0 313 1 412 242 72 77 chr20 49772277 49772471 -22381411 + MIR SINE MIR 21 213 -49 1097 124 90 0 chr20 49773526 49773704 -22380178 - MER7A DNA MER2_type -153 193 2 815 147 0 0 chr20 49775172 49775313 -22378569 - FLAM_C SINE Alu 0 141 1 188 250 13 105 chr20 49775331 49775345 -22378537 - MIR3 SINE MIR -23 185 171 1879 143 0 50 chr20 49775345 49775667 -22378215 + AluSx SINE Alu 1 306 -6 188 250 13 105 chr20 49775667 49775728 -22378154 - MIR3 SINE MIR -37 171 117 327 255 64 0 chr20 49776122 49776216 -22377666 + MLT1K LTR MaLR 142 241 -347 2108 94 30 20 chr20 49776347 49776645 -22377237 + AluY SINE Alu 1 301 -10 2108 130 7 0 chr20 49777008 49777307 -22376575 + AluSx SINE Alu 1 301 -11 214 196 43 0 chr20 49779409 49779455 -22374427 - L2 LINE L2 0 3272 3225 2007 161 80 64 chr20 49779557 49780123 -22373759 + L1MD1 LINE L1 5651 6225 -17 1538 155 50 118 chr20 49780150 49780244 -22373638 + L1MC4a LINE L1 7357 7456 -352 2234 107 44 7 chr20 49780244 49780542 -22373340 - AluSq SINE Alu -4 309 1 1538 155 50 118 chr20 49780542 49780573 -22373309 + L1MC4a LINE L1 7456 7488 -320 793 167 0 30 chr20 49780573 49780705 -22373177 + FLAM_A SINE Alu 1 128 -5 1538 155 50 118 chr20 49780705 49781063 -22372819 + L1MC4a LINE L1 7488 7808 0 256 256 89 44 chr20 49781079 49781169 -22372713 - L2 LINE L2 -175 3097 3004 2468 64 0 0 chr20 49781514 49781810 -22372072 - AluY SINE Alu -15 296 1 274 57 0 0 chr20 49782410 49782445 -22371437 - U2 snRNA snRNA -153 35 1 2426 105 0 3 chr20 49782476 49782790 -22371092 + AluSq SINE Alu 1 313 0 380 320 89 57 chr20 49782946 49783144 -22370738 + MIR SINE MIR 2 211 -51 2138 130 3 0 chr20 49783144 49783443 -22370439 + AluSx SINE Alu 1 300 -12 380 320 89 57 chr20 49783443 49783491 -22370391 + MIR SINE MIR 211 256 -6 2406 164 69 27 chr20 49783643 49784197 -22369685 - L1MB8 LINE L1 -1 6177 5601 230 369 28 21 chr20 49784873 49785014 -22368868 + MIR3 SINE MIR 62 203 -5 223 280 67 40 chr20 49785441 49785516 -22368366 + MIR SINE MIR 69 145 -117 192 246 14 72 chr20 49786427 49786496 -22367386 - MIR SINE MIR -117 91 27 * 787 242 16 0 chr20 49786439 49786627 -22367255 + MIR SINE MIR 30 219 -43 2062 137 0 3 chr20 49786817 49787131 -22366751 + AluSx SINE Alu 1 313 0 235 267 114 50 chr20 49787197 49787399 -22366483 - L2 LINE L2 -220 3052 2838 197 260 192 29 chr20 49787984 49788088 -22365794 - L2 LINE L2 -14 3299 3179 1794 171 31 0 chr20 49788496 49788783 -22365099 - AluSx SINE Alu -16 296 1 484 272 8 24 chr20 49789700 49789825 -22364057 - MIR SINE MIR -111 151 29 1850 176 0 10 chr20 49790722 49791035 -22362847 + AluJb SINE Alu 1 310 -2 249 231 58 39 chr20 49791238 49791342 -22362540 - L1MC4a LINE L1 -1633 6175 6070 234 289 22 0 chr20 49791396 49791486 -22362396 + (TA)n Simple_repeat Simple_repeat 2 93 0 256 123 105 0 chr20 49791567 49791624 -22362258 + MER3 DNA MER1_type 122 184 -25 713 286 70 30 chr20 49791646 49791947 -22361935 - L1MC4a LINE L1 -1952 5856 5544 1526 106 5 0 chr20 49791953 49792151 -22361731 - AluSp SINE Alu -9 304 106 2237 100 13 3 chr20 49792314 49792615 -22361267 + AluSc SINE Alu 1 304 -5 1324 125 28 5 chr20 49792619 49792835 -22361047 + L1MB3 LINE L1 5955 6175 -8 433 45 30 30 chr20 49792970 49793037 -22360845 + MER20 DNA MER1_type 1 67 -152 821 147 110 0 chr20 49793037 49793200 -22360682 - L1MB4 LINE L1 -4 6176 5996 840 192 18 18 chr20 49793202 49793369 -22360513 + MER20 DNA MER1_type 53 219 0 2146 137 0 0 chr20 49794065 49794364 -22359518 - AluJo SINE Alu -13 299 1 2167 131 3 10 chr20 49795398 49795532 -22358350 + AluSx SINE Alu 1 134 -178 2106 97 49 0 chr20 49795532 49795820 -22358062 + AluSq SINE Alu 1 302 -11 2167 131 3 10 chr20 49795820 49795999 -22357883 + AluSx SINE Alu 134 312 0 704 220 120 5 chr20 49796017 49796208 -22357674 + MIR SINE MIR 33 245 -17 547 237 258 26 chr20 49796466 49796656 -22357226 + MIR SINE MIR 8 241 -21 1175 149 6 6 chr20 49796662 49796837 -22357045 - FAM SINE Alu 0 175 1 204 274 123 47 chr20 49797117 49797223 -22356659 + L2 LINE L2 3138 3251 -21 2460 83 0 3 chr20 49797269 49797571 -22356311 - AluSg SINE Alu -9 301 1 2472 71 16 0 chr20 49798669 49798977 -22354905 + AluSq SINE Alu 1 313 0 180 0 0 0 chr20 49799768 49799788 -22354094 + (CCG)n Simple_repeat Simple_repeat 3 22 0 1755 241 198 51 chr20 49800529 49800741 -22353141 + L2 LINE L2 1039 1219 -2095 2241 89 0 0 chr20 49800741 49801062 -22352820 + AluSq SINE Alu 1 321 0 1755 241 198 51 chr20 49801062 49801481 -22352401 + L2 LINE L2 1219 1575 -1739 1886 139 3 77 chr20 49801481 49801818 -22352064 + AluJo SINE Alu 1 312 0 1755 241 198 51 chr20 49801818 49801980 -22351902 + L2 LINE L2 1575 1952 -1362 2016 87 0 4 chr20 49802205 49802459 -22351423 - AluSg SINE Alu -1 309 57 2151 133 0 3 chr20 49802780 49803088 -22350794 + AluSx SINE Alu 1 307 -5 23 0 0 0 chr20 49803456 49803479 -22350403 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr20 49803649 49803679 -22350203 + AT_rich Low_complexity Low_complexity 1 30 0 340 279 36 43 chr20 49805025 49805165 -22348717 + L2 LINE L2 3134 3272 0 273 57 0 0 chr20 49807431 49807466 -22346416 + (TG)n Simple_repeat Simple_repeat 2 36 0 888 265 153 13 chr20 49808488 49808881 -22345001 + MLT1K LTR MaLR 120 567 -21 283 303 106 62 chr20 49809119 49809156 -22344726 + L1MC1 LINE L1 5254 5288 -2520 2328 101 3 0 chr20 49809156 49809453 -22344429 - AluSx SINE Alu -14 298 1 283 303 106 62 chr20 49809453 49809735 -22344147 + L1MC1 LINE L1 5288 5587 -2221 23 54 0 0 chr20 49809787 49809824 -22344058 + AT_rich Low_complexity Low_complexity 1 37 0 306 271 47 0 chr20 49809928 49810013 -22343869 + L1MC1 LINE L1 5779 5867 -1941 328 226 39 69 chr20 49810035 49810137 -22343745 + L1MC4 LINE L1 6605 6703 -1339 322 158 0 79 chr20 49810107 49810183 -22343699 - L1MCa LINE L1 -4362 2064 1995 * 838 172 0 0 chr20 49810256 49810384 -22343498 - FLAM_C SINE Alu -5 128 1 419 249 228 1 chr20 49810470 49810622 -22343260 - MER5A DNA MER1_type 0 189 1 207 175 50 0 chr20 49810627 49810667 -22343215 - MER5B DNA MER1_type -12 166 125 2051 132 3 17 chr20 49810678 49810973 -22342909 + AluSx SINE Alu 1 291 -21 496 203 32 17 chr20 49810979 49811122 -22342760 + L1MC1 LINE L1 5881 6035 -309 1551 164 39 0 chr20 49811202 49811488 -22342394 + L1MC2 LINE L1 6048 6344 0 1792 158 7 23 chr20 49811501 49811804 -22342078 + AluJo SINE Alu 2 299 -13 235 252 36 81 chr20 49811814 49811925 -22341957 + L3b LINE CR1 1299 1404 -179 1342 241 107 40 chr20 49812032 49812270 -22341612 + MER92B LTR ERV1 1 222 -414 2269 91 31 0 chr20 49812270 49812557 -22341325 - AluSx SINE Alu -15 297 2 1342 241 107 40 chr20 49812557 49812890 -22340992 + MER92B LTR ERV1 222 610 -26 2392 98 0 0 chr20 49812907 49813204 -22340678 + AluSc SINE Alu 1 297 -12 274 288 62 0 chr20 49813215 49813295 -22340587 - MER5B DNA MER1_type -48 130 46 1986 152 0 19 chr20 49813301 49813610 -22340272 + AluSx SINE Alu 5 307 -5 553 83 0 115 chr20 49813742 49813768 -22340114 - MER5A DNA MER1_type -98 91 64 1421 180 31 63 chr20 49813768 49814085 -22339797 - AluJo SINE Alu -5 307 1 553 83 0 115 chr20 49814085 49814154 -22339728 - MER5A DNA MER1_type -125 64 7 1636 87 5 0 chr20 49814164 49814371 -22339511 + AluSq SINE Alu 96 303 -10 1117 178 130 53 chr20 49814371 49814631 -22339251 + L1ME3A LINE L1 5481 5720 -450 2251 109 0 10 chr20 49814631 49814933 -22338949 + AluSx SINE Alu 1 299 -13 1117 178 130 53 chr20 49814933 49815002 -22338880 + L1ME3A LINE L1 5720 5782 -388 2569 74 0 0 chr20 49815002 49815313 -22338569 + AluY SINE Alu 1 311 0 1980 145 10 32 chr20 49815322 49815445 -22338437 + AluJo SINE Alu 1 125 -187 2309 76 4 0 chr20 49815445 49815752 -22338130 - AluSc SINE Alu 0 308 1 1980 145 10 32 chr20 49815752 49815938 -22337944 + AluJo SINE Alu 125 304 -8 1117 178 130 53 chr20 49815938 49816187 -22337695 + L1ME3A LINE L1 5789 6124 -46 2045 143 3 7 chr20 49816187 49816495 -22337387 + AluSx SINE Alu 1 307 -5 1117 178 130 53 chr20 49816495 49816546 -22337336 + L1ME3A LINE L1 6124 6170 0 1541 214 76 21 chr20 49816996 49817168 -22336714 + MLT1C LTR MaLR 2 163 -304 1987 159 6 16 chr20 49817168 49817483 -22336399 + AluJo SINE Alu 1 312 0 1541 214 76 21 chr20 49817483 49817744 -22336138 + MLT1C LTR MaLR 163 459 -8 632 171 11 28 chr20 49819120 49819301 -22334581 + (TCCA)n Simple_repeat Simple_repeat 3 180 0 2303 97 37 3 chr20 49819884 49820184 -22333698 + AluSx SINE Alu 1 310 -2 2499 199 28 44 chr20 49820803 49821371 -22332511 + MLT1F1 LTR MaLR 1 559 -8 389 246 135 8 chr20 49821997 49822123 -22331759 - MIR SINE MIR -8 254 113 238 312 86 0 chr20 49822664 49822757 -22331125 - L2 LINE L2 -253 3060 2960 232 246 33 0 chr20 49822762 49822823 -22331059 + L2 LINE L2 3200 3262 -10 930 87 0 0 chr20 49822824 49822962 -22330920 + (TGGA)n Simple_repeat Simple_repeat 1 138 0 893 195 43 0 chr20 49823310 49823474 -22330408 - FRAM SINE Alu -5 171 1 232 257 49 125 chr20 49824033 49824177 -22329705 + L2 LINE L2 2935 3067 -246 678 218 39 17 chr20 49824449 49824628 -22329254 + Charlie4 DNA MER1_type 27 209 -1752 582 163 172 62 chr20 49824613 49824758 -22329124 + Charlie4 DNA MER1_type 1730 1906 -55 * 2355 102 0 0 chr20 49824758 49825053 -22328829 + AluSx SINE Alu 1 295 -17 582 163 172 62 chr20 49825053 49825116 -22328766 + Charlie4 DNA MER1_type 1906 1961 0 212 281 35 0 chr20 49825365 49825422 -22328460 + L2 LINE L2 3188 3246 -26 538 282 38 66 chr20 49826235 49826374 -22327508 - MIR SINE MIR -9 253 121 2139 101 10 14 chr20 49826374 49826670 -22327212 + AluSx SINE Alu 1 295 -17 538 282 38 66 chr20 49826670 49826743 -22327139 - MIR SINE MIR -141 121 47 415 206 69 69 chr20 49826914 49827103 -22326779 + MER5A DNA MER1_type 1 189 0 2054 120 3 7 chr20 49828270 49828553 -22325329 + AluSq SINE Alu 1 282 -31 577 288 63 115 chr20 49829320 49829824 -22324058 + L1MC4a LINE L1 6114 6591 -1217 1812 117 0 4 chr20 49829882 49830157 -22323725 + AluSx SINE Alu 53 326 0 893 206 86 23 chr20 49830170 49830458 -22323424 + L1MC5 LINE L1 6877 7153 -808 672 183 8 0 chr20 49830477 49830603 -22323279 - AluSg/x SINE Alu -1 308 182 2005 110 65 0 chr20 49830677 49830969 -22322913 + AluSx SINE Alu 1 311 -1 424 222 46 0 chr20 49831045 49831153 -22322729 + L1MC5 LINE L1 7271 7383 -578 666 243 23 32 chr20 49831343 49831561 -22322321 - LTR33 LTR ERVL -265 256 41 956 216 101 92 chr20 49831596 49831745 -22322137 + L1MC5 LINE L1 7375 7521 -440 1673 164 0 87 chr20 49831745 49832080 -22321802 + AluSx SINE Alu 7 312 0 956 216 101 92 chr20 49832080 49832476 -22321406 + L1MC5 LINE L1 7521 7925 -36 1559 177 64 3 chr20 49832489 49832771 -22321111 + AluJo SINE Alu 1 299 -13 661 118 0 11 chr20 49832891 49832984 -22320898 - FLAM_A SINE Alu -32 110 19 245 203 68 0 chr20 49833124 49833183 -22320699 - L1MC/D LINE L1 -1934 5874 5812 2179 125 0 13 chr20 49833246 49833549 -22320333 - AluSx SINE Alu -13 299 1 2333 105 0 0 chr20 49833778 49834072 -22319810 + AluSx SINE Alu 1 294 -18 234 307 29 29 chr20 49834086 49834223 -22319659 - L1ME3A LINE L1 -24 6146 6010 1733 196 0 29 chr20 49834340 49834652 -22319230 - AluJo SINE Alu -9 303 1 1930 118 24 38 chr20 49834660 49834977 -22318905 - AluSx SINE Alu 0 313 1 487 129 89 0 chr20 49834977 49835078 -22318804 - L1ME3A LINE L1 -297 5873 5764 330 340 81 20 chr20 49835073 49835479 -22318403 - L1M4 LINE L1 -1146 5000 4570 * 446 297 23 80 chr20 49835531 49835820 -22318062 - L1ME2 LINE L1 -293 5871 5610 23 33 0 0 chr20 49835820 49835850 -22318032 + AT_rich Low_complexity Low_complexity 1 30 0 2039 152 3 3 chr20 49835900 49836210 -22317672 + AluSx SINE Alu 1 310 -2 301 26 92 13 chr20 49836210 49836286 -22317596 + (TA)n Simple_repeat Simple_repeat 1 82 0 322 244 41 32 chr20 49836646 49836769 -22317113 + MLT1K LTR MaLR 353 476 -112 794 224 107 37 chr20 49836991 49837317 -22316565 - MLT1H1 LTR MaLR -6 549 201 250 309 0 12 chr20 49837393 49837477 -22316405 - MLT1H1 LTR MaLR -439 103 21 680 263 150 5 chr20 49837719 49837932 -22315950 + MIR SINE MIR 12 255 -7 309 321 14 21 chr20 49838025 49838165 -22315717 - L2 LINE L2 -256 3016 2878 1058 188 57 182 chr20 49838192 49838257 -22315625 + MLT1G3 LTR MaLR 3 75 -455 1974 152 44 41 chr20 49838257 49838355 -22315527 + MLT1B LTR MaLR 1 97 -293 2332 106 3 10 chr20 49838355 49838667 -22315215 + AluSx SINE Alu 1 310 -2 1974 152 44 41 chr20 49838667 49838957 -22314925 + MLT1B LTR MaLR 97 390 0 1058 188 57 182 chr20 49838957 49839555 -22314327 + MLT1G3 LTR MaLR 74 528 -2 772 248 65 40 chr20 49839871 49840024 -22313858 + MER46C DNA MER2_type 1 149 -189 2462 79 7 0 chr20 49840024 49840327 -22313555 - AluSx SINE Alu -7 305 1 772 248 65 40 chr20 49840327 49840396 -22313486 + MER46C DNA MER2_type 149 215 -123 842 202 92 0 chr20 49840396 49840569 -22313313 + MER5A DNA MER1_type 1 189 0 772 248 65 40 chr20 49840569 49840667 -22313215 + MER46C DNA MER2_type 215 330 -8 2388 82 3 0 chr20 49840745 49841038 -22312844 + AluSp SINE Alu 1 294 -19 503 278 80 12 chr20 49841096 49841258 -22312624 - MIR SINE MIR 0 262 90 239 118 0 0 chr20 49841277 49841311 -22312571 - LTR33 LTR ERVL -253 268 235 2255 93 0 17 chr20 49841609 49841924 -22311958 + AluSq SINE Alu 1 310 0 566 275 68 52 chr20 49841931 49842475 -22311407 - L1ME3A LINE L1 -255 5915 5365 337 153 0 141 chr20 49842518 49842603 -22311279 + Tigger2 DNA MER2_type 1 73 -2645 430 299 58 90 chr20 49843155 49843180 -22310702 - L2 LINE L2 -1 3271 3247 1607 164 19 68 chr20 49843180 49843321 -22310561 + AluJo SINE Alu 2 148 -164 2117 143 0 0 chr20 49843321 49843615 -22310267 + AluSx SINE Alu 1 294 -18 1607 164 19 68 chr20 49843615 49843797 -22310085 + AluJo SINE Alu 148 309 -3 430 299 58 90 chr20 49843797 49843896 -22309986 - L2 LINE L2 -25 3247 3146 1582 174 72 72 chr20 49843896 49844169 -22309713 - MLT1B LTR MaLR 0 390 115 2166 138 0 3 chr20 49844169 49844480 -22309402 - AluSx SINE Alu -2 310 1 1582 174 72 72 chr20 49844480 49844596 -22309286 - MLT1B LTR MaLR -274 116 1 430 299 58 90 chr20 49844596 49844815 -22309067 - L2 LINE L2 -126 3146 2938 319 236 36 45 chr20 49844932 49845042 -22308840 - MER5A DNA MER1_type -28 161 53 434 211 24 16 chr20 49845042 49845165 -22308717 - L1MC4 LINE L1 0 8042 7919 1238 290 38 36 chr20 49845189 49845213 -22308669 - L1MC4 LINE L1 -210 7832 7810 1679 164 41 7 chr20 49845213 49845360 -22308522 + AluJo SINE Alu 1 141 -171 2360 98 0 7 chr20 49845360 49845665 -22308217 + AluSc SINE Alu 1 303 -6 1679 164 41 7 chr20 49845665 49845809 -22308073 + AluJo SINE Alu 141 302 -10 1238 290 38 36 chr20 49845809 49846447 -22307435 - L1MC4 LINE L1 -232 7810 7169 932 134 6 0 chr20 49846455 49846612 -22307270 + (TTCC)n Simple_repeat Simple_repeat 2 159 0 2184 126 0 0 chr20 49846613 49846899 -22306983 - AluSx SINE Alu -26 286 1 204 94 0 31 chr20 49846900 49846932 -22306950 - MER5A DNA MER1_type -115 74 44 187 273 71 61 chr20 49847047 49847146 -22306736 + MER5A DNA MER1_type 52 151 -38 2469 169 16 16 chr20 49847165 49847608 -22306274 + MSTB2 LTR MaLR 11 453 -4 447 267 19 9 chr20 49847761 49847866 -22306016 - MER5B DNA MER1_type -72 106 1 2393 95 0 0 chr20 49847905 49848209 -22305673 + AluY SINE Alu 1 304 -7 252 325 123 9 chr20 49848422 49848555 -22305327 - MIR SINE MIR -66 142 16 1392 136 93 107 chr20 49848773 49849083 -22304799 + AluJo SINE Alu 1 306 -6 2008 128 45 0 chr20 49849093 49849381 -22304501 + AluSx SINE Alu 1 301 -11 2554 48 0 0 chr20 49849515 49849809 -22304073 - AluY SINE Alu -17 294 1 4418 153 57 55 chr20 49850124 49850568 -22303314 - L1MB8 LINE L1 0 6178 5737 2874 3 0 0 chr20 49850568 49850871 -22303011 - AluYa5 SINE Alu -8 303 1 4418 153 57 55 chr20 49850871 49851273 -22302609 - L1MB8 LINE L1 -441 5737 5337 1602 123 0 4 chr20 49851273 49851500 -22302382 - AluSg/x SINE Alu 0 310 85 4418 153 57 55 chr20 49851500 49851624 -22302258 - L1MB8 LINE L1 -841 5337 5215 1801 160 22 78 chr20 49851624 49851690 -22302192 - MLT1B LTR MaLR 0 390 322 2346 109 0 0 chr20 49851690 49851993 -22301889 + AluSx SINE Alu 1 303 -9 1801 160 22 78 chr20 49851993 49852339 -22301543 - MLT1B LTR MaLR -68 322 1 4418 153 57 55 chr20 49852339 49852378 -22301504 - L1MB8 LINE L1 -963 5215 5178 1721 186 45 0 chr20 49852378 49852669 -22301213 - AluJo SINE Alu -8 304 1 4418 153 57 55 chr20 49852669 49853136 -22300746 - L1MB8 LINE L1 -1000 5178 4700 412 265 67 0 chr20 49854328 49854444 -22299438 + MIR SINE MIR 24 147 -61 238 292 67 22 chr20 49856280 49856369 -22297513 + MIR SINE MIR 59 151 -111 357 213 67 0 chr20 49857189 49857264 -22296618 - MIR SINE MIR -70 192 113 572 297 28 22 chr20 49857603 49857785 -22296097 + MIR SINE MIR 35 217 -45 2198 117 3 0 chr20 49857792 49858091 -22295791 + AluSx SINE Alu 5 304 -8 263 323 213 0 chr20 49858395 49858522 -22295360 - L2 LINE L2 0 3272 3119 197 311 14 14 chr20 49858585 49858659 -22295223 + MIR SINE MIR 40 113 -149 1999 156 0 16 chr20 49858734 49859048 -22294834 + AluJb SINE Alu 1 309 -3 297 256 39 45 chr20 49859199 49859355 -22294527 - L2 LINE L2 -300 2972 2818 546 294 35 6 chr20 49859710 49859880 -22294002 - MIR SINE MIR -21 241 67 382 277 30 0 chr20 49860353 49860454 -22293428 + MIR SINE MIR 46 149 -113 1208 154 0 66 chr20 49860686 49860913 -22292969 + MER20 DNA MER1_type 3 214 -5 344 298 30 76 chr20 49860918 49861049 -22292833 + L2 LINE L2 3148 3272 0 437 219 62 10 chr20 49861961 49862057 -22291825 - MER5A DNA MER1_type -85 104 4 412 278 8 16 chr20 49862357 49862483 -22291399 + MER5A DNA MER1_type 44 168 -21 550 230 86 59 chr20 49862547 49862699 -22291183 + MER91A DNA MER1_type 1 156 -40 793 254 68 48 chr20 49862699 49862789 -22291093 - MIR SINE MIR -2 260 173 1992 116 0 0 chr20 49862789 49863133 -22290749 - AluSx SINE Alu 0 344 1 793 254 68 48 chr20 49863133 49863289 -22290593 - MIR SINE MIR -89 173 8 404 266 73 32 chr20 49863410 49863534 -22290348 + MIR SINE MIR 29 157 -105 454 246 144 79 chr20 49864387 49864741 -22289141 - L1ME LINE L1 -301 5820 5444 208 333 119 0 chr20 49864812 49864938 -22288944 - L2 LINE L2 -14 3299 3159 368 292 138 31 chr20 49866075 49866205 -22287677 - L2 LINE L2 -22 3250 3107 2139 112 0 7 chr20 49866317 49866621 -22287261 + AluSq SINE Alu 1 302 -11 230 302 70 12 chr20 49866711 49866797 -22287085 - L2 LINE L2 -243 3029 2939 2446 56 0 0 chr20 49866799 49867101 -22286781 + AluY SINE Alu 1 302 -9 509 301 142 13 chr20 49867126 49867352 -22286530 + MIR SINE MIR 3 257 -5 202 342 42 17 chr20 49867524 49867644 -22286238 - L2 LINE L2 -559 2755 2633 271 224 59 0 chr20 49867645 49867730 -22286152 - MER103 DNA DNA -19 147 58 1592 166 12 56 chr20 49867791 49868111 -22285771 - AluJo SINE Alu -6 306 1 775 283 46 25 chr20 49868149 49868386 -22285496 + MIR SINE MIR 20 261 -1 642 189 30 23 chr20 49868403 49868535 -22285347 + FLAM_A SINE Alu 1 133 0 622 215 55 0 chr20 49868693 49868829 -22285053 + MER5B DNA MER1_type 1 144 -45 2064 232 94 37 chr20 49868861 49869313 -22284569 - L1ME3A LINE L1 -30 6140 5715 2354 70 3 0 chr20 49869313 49869611 -22284271 + AluSp SINE Alu 1 299 -14 2064 232 94 37 chr20 49869611 49869787 -22284095 - L1ME3A LINE L1 -455 5715 5469 2376 65 0 29 chr20 49869787 49870096 -22283786 + AluY SINE Alu 1 300 -11 2064 232 94 37 chr20 49870096 49870138 -22283744 - L1ME3A LINE L1 -701 5469 5431 205 183 124 0 chr20 49870142 49870191 -22283691 + MER5B DNA MER1_type 131 173 -5 1773 242 35 104 chr20 49870729 49871639 -22282243 - L1ME LINE L1 -5218 852 6 2159 103 13 10 chr20 49872395 49872706 -22281176 + AluSx SINE Alu 1 312 0 354 288 96 41 chr20 49873006 49873206 -22280676 + MIR SINE MIR 2 214 -48 206 292 0 18 chr20 49873530 49873599 -22280283 + MIR SINE MIR 18 86 -122 1291 145 145 16 chr20 49873784 49874039 -22279843 + AluSg1 SINE Alu 1 288 -21 353 173 0 0 chr20 49874783 49874835 -22279047 - Alu SINE Alu -250 52 1 448 297 18 6 chr20 49874893 49875058 -22278824 - MER117 DNA MER1_type -13 184 18 22 56 0 0 chr20 49875949 49875985 -22277897 + AT_rich Low_complexity Low_complexity 1 36 0 1414 130 0 5 chr20 49875987 49876202 -22277680 - AluJo SINE Alu -13 299 86 189 297 95 95 chr20 49876304 49876452 -22277430 - L3 LINE CR1 -505 1072 925 279 255 48 12 chr20 49877470 49877569 -22276313 - MLT1K LTR MaLR -2 613 489 233 196 71 0 chr20 49877715 49877771 -22276111 - MLT1K LTR MaLR -333 255 196 361 280 21 0 chr20 49879255 49879348 -22274534 + L2 LINE L2 3214 3308 -5 1150 252 137 15 chr20 49879412 49879872 -22274010 + MER113 DNA MER1_type? 5 520 -1 649 239 69 93 chr20 49880542 49880831 -22273051 - MER102b DNA MER1_type 0 341 60 182 405 0 0 chr20 49881058 49881147 -22272735 + L2 LINE L2 2965 3053 -219 586 224 0 42 chr20 49881161 49881304 -22272578 + MIR SINE MIR 61 197 -65 3044 171 49 89 chr20 49881531 49881674 -22272208 + L1MD1 LINE L1 5457 5604 -638 2239 72 20 0 chr20 49881674 49881967 -22271915 + AluSx SINE Alu 2 300 -12 3044 171 49 89 chr20 49881967 49882635 -22271247 + L1MD1 LINE L1 5604 6236 -6 711 174 8 15 chr20 49883215 49883347 -22270535 - FLAM_C SINE Alu -11 132 2 195 273 36 18 chr20 49883397 49883452 -22270430 - MIR SINE MIR -65 143 88 1798 169 47 108 chr20 49883628 49884185 -22269697 - Charlie1b DNA MER1_type 0 523 1 227 253 19 117 chr20 49884474 49884502 -22269380 - L2 LINE L2 -470 2844 2815 1004 174 79 0 chr20 49884502 49884692 -22269190 + MER3 DNA MER1_type 5 209 0 227 253 19 117 chr20 49884692 49884817 -22269065 - L2 LINE L2 -499 2815 2706 1502 179 0 23 chr20 49885393 49885695 -22268187 - AluJb SINE Alu -17 295 1 572 212 18 0 chr20 49885730 49885863 -22268019 - FLAM_A SINE Alu 0 135 1 187 303 146 0 chr20 49885952 49886041 -22267841 - L2 LINE L2 -13 3259 3158 592 306 32 40 chr20 49886151 49886403 -22267479 + MIR SINE MIR 10 259 -3 2021 126 0 19 chr20 49886566 49886884 -22266998 - AluSx SINE Alu 0 312 1 23 0 0 0 chr20 49886923 49886946 -22266936 + AT_rich Low_complexity Low_complexity 1 23 0 368 202 173 9 chr20 49886989 49887119 -22266763 - MIR SINE MIR -37 171 22 340 260 88 78 chr20 49887858 49887957 -22265925 + MIR3 SINE MIR 13 110 -152 2103 90 0 4 chr20 49887957 49888258 -22265624 - AluSx SINE Alu 0 307 8 340 260 88 78 chr20 49888258 49888355 -22265527 + MIR3 SINE MIR 110 216 -46 485 256 83 88 chr20 49888464 49888909 -22264973 - L1MC4a LINE L1 -1671 6137 5695 226 292 107 56 chr20 49889465 49889698 -22264184 + L2 LINE L2 2826 3070 -202 937 239 48 16 chr20 49889736 49889987 -22263895 + MIR SINE MIR 1 259 -3 839 233 57 41 chr20 49890051 49890146 -22263736 - MIR SINE MIR -13 249 157 2838 183 33 26 chr20 49890146 49890282 -22263600 - L1MB7 LINE L1 0 6184 6050 1517 168 40 44 chr20 49890282 49890579 -22263303 + AluJb SINE Alu 2 297 -5 2838 183 33 26 chr20 49890579 49891083 -22262799 - L1MB7 LINE L1 -134 6050 5540 839 233 57 41 chr20 49891083 49891232 -22262650 - MIR SINE MIR -105 157 1 336 188 35 97 chr20 49891851 49891995 -22261887 - L1ME4a LINE L1 -1 6120 5986 281 270 0 11 chr20 49891998 49892087 -22261795 - LTR33 LTR ERVL 0 521 434 810 198 40 0 chr20 49892096 49892269 -22261613 - Charlie1a DNA MER1_type -1 1454 1275 2618 163 152 4 chr20 49892269 49892761 -22261121 - MLT1F1 LTR MaLR -2 565 1 * 5322 182 96 18 chr20 49892761 49893942 -22259940 - Charlie1a DNA MER1_type -181 1274 1 358 241 90 78 chr20 49893942 49894107 -22259775 - LTR33 LTR ERVL -98 423 257 814 218 0 24 chr20 49894337 49894529 -22259353 + FRAM SINE Alu 1 176 0 1246 261 156 64 chr20 49894649 49895568 -22258314 - L2 LINE L2 -358 2956 1954 620 253 94 50 chr20 49895568 49895757 -22258125 - L1ME4a LINE L1 -260 5861 5653 1655 176 10 13 chr20 49895757 49896070 -22257812 + AluJb SINE Alu 1 312 0 620 253 94 50 chr20 49896070 49896177 -22257705 - L1ME4a LINE L1 -468 5653 5552 350 258 142 26 chr20 49896294 49896387 -22257495 - L1ME4a LINE L1 -2349 5436 5355 2238 99 3 0 chr20 49896387 49896691 -22257191 - AluSx SINE Alu -5 307 3 350 258 142 26 chr20 49896691 49896752 -22257130 - L1ME4a LINE L1 -2430 5355 5264 566 353 88 52 chr20 49896818 49897001 -22256881 - L1ME4a LINE L1 -885 5261 5086 1259 191 18 0 chr20 49897001 49897221 -22256661 + MER58A DNA MER1_type 1 224 0 566 353 88 52 chr20 49897221 49897654 -22256228 - L1ME4a LINE L1 -1060 5086 4623 2460 61 0 21 chr20 49897687 49898016 -22255866 + L1PA13 LINE L1 5835 6156 -7 337 304 55 55 chr20 49898151 49898332 -22255550 - L1ME4a LINE L1 -1768 4378 4198 480 306 249 10 chr20 49898393 49898694 -22255188 - L3 LINE CR1 -342 1235 863 212 77 26 0 chr20 49898698 49898737 -22255145 + (CAAAAA)n Simple_repeat Simple_repeat 2 41 0 513 164 125 39 chr20 49898737 49898865 -22255017 - L1ME3A LINE L1 -5 6165 6027 279 218 148 20 chr20 49898981 49899082 -22254800 - MLT1K LTR MaLR -7 581 468 696 291 83 67 chr20 49899120 49899447 -22254435 - MLT1K LTR MaLR -236 352 21 284 172 172 16 chr20 49899539 49899603 -22254279 + MER3 DNA MER1_type 1 74 -135 369 236 55 79 chr20 49899682 49899721 -22254161 - L3 LINE CR1 -903 674 636 2131 94 3 7 chr20 49899721 49900020 -22253862 + AluSx SINE Alu 1 298 -14 369 236 55 79 chr20 49900020 49900145 -22253737 - L3 LINE CR1 -941 636 514 21 36 0 0 chr20 49900188 49900216 -22253666 + AT_rich Low_complexity Low_complexity 1 28 0 2245 102 0 0 chr20 49900219 49900514 -22253368 + AluSx SINE Alu 1 295 -17 262 304 89 27 chr20 49900593 49900705 -22253177 - L2 LINE L2 -4 3268 3150 1525 178 0 41 chr20 49900776 49901069 -22252813 + AluJb SINE Alu 2 282 -30 284 348 108 64 chr20 49901539 49901789 -22252093 - L3 LINE CR1 -1021 556 296 1985 103 7 0 chr20 49901835 49902108 -22251774 - AluSx SINE Alu -37 275 1 496 265 175 43 chr20 49902643 49903074 -22250808 - MLT1H LTR MaLR -3 546 21 432 190 198 9 chr20 49903633 49903749 -22250133 + MIR SINE MIR 16 153 -109 339 25 0 0 chr20 49904941 49904981 -22248901 + (TA)n Simple_repeat Simple_repeat 1 40 0 381 93 0 0 chr20 49904981 49905035 -22248847 + (GA)n Simple_repeat Simple_repeat 1 54 0 707 262 129 9 chr20 49905669 49905894 -22247988 - MIR SINE MIR -6 256 5 28 0 0 0 chr20 49906381 49906409 -22247473 + AT_rich Low_complexity Low_complexity 1 28 0 1544 193 67 22 chr20 49906930 49907288 -22246594 - MLT1A2 LTR MaLR 0 374 1 382 248 216 7 chr20 49907808 49907954 -22245928 - MLT1J2 LTR MaLR 0 555 379 463 254 53 0 chr20 49907986 49908100 -22245782 - MLT1J2 LTR MaLR -284 271 152 303 142 67 134 chr20 49908271 49908405 -22245477 + L1MB8 LINE L1 5968 6092 -86 981 97 14 72 chr20 49908487 49908534 -22245348 - MER33 DNA MER1_type -2261 324 276 1717 174 3 0 chr20 49908534 49908827 -22245055 - AluJo SINE Alu -18 294 1 981 97 14 72 chr20 49908827 49908986 -22244896 - MER33 DNA MER1_type -2309 276 130 1844 119 16 10 chr20 49908987 49909438 -22244444 - AluSq SINE Alu 0 313 1 327 280 103 0 chr20 49909444 49909551 -22244331 - MER33 DNA MER1_type -206 118 1 697 225 66 6 chr20 49909588 49909770 -22244112 - MLT1J2 LTR MaLR -255 195 3 489 269 42 24 chr20 49910127 49910294 -22243588 + MIR SINE MIR 8 177 -85 2441 94 0 0 chr20 49910704 49911011 -22242871 - AluSg SINE Alu -3 307 1 410 163 22 33 chr20 49911362 49911454 -22242428 - MIR SINE MIR -93 169 79 678 322 24 0 chr20 49912577 49912785 -22241097 + MIR SINE MIR 44 256 -6 2903 160 14 14 chr20 49912853 49913410 -22240472 + L1MB8 LINE L1 5622 6178 0 729 219 66 10 chr20 49913435 49913631 -22240251 - MIR SINE MIR -13 249 43 2605 52 0 7 chr20 49914319 49914627 -22239255 - AluY SINE Alu -5 306 1 314 237 44 13 chr20 49914687 49914800 -22239082 - MIR SINE MIR -62 146 32 2226 126 0 3 chr20 49914880 49915190 -22238692 + AluSg SINE Alu 1 309 -1 364 258 10 10 chr20 49915348 49915445 -22238437 + MIR SINE MIR 59 155 -107 2154 150 42 5 chr20 49915785 49916166 -22237716 - L1MB5 LINE L1 0 6174 5780 712 264 74 17 chr20 49916422 49916653 -22237229 + MIR SINE MIR 15 258 -4 2284 124 0 0 chr20 49916702 49917009 -22236873 - AluSx SINE Alu -5 307 1 216 268 56 0 chr20 49917180 49917251 -22236631 + L2 LINE L2 3154 3228 -44 1212 199 11 49 chr20 49917330 49917424 -22236458 - L1MD2 LINE L1 -15 6344 6248 1972 108 8 0 chr20 49917424 49917682 -22236200 - AluSx SINE Alu -15 297 38 1212 199 11 49 chr20 49917682 49917874 -22236008 - L1MD2 LINE L1 -111 6248 6069 553 181 67 0 chr20 49917881 49918030 -22235852 + MER33 DNA MER1_type 199 357 -6 294 218 25 50 chr20 49918033 49918123 -22235759 - L1ME2 LINE L1 -124 6042 5948 2284 110 10 3 chr20 49918187 49918495 -22235387 - AluSx SINE Alu -2 310 1 934 163 33 27 chr20 49918495 49918679 -22235203 - L1MB5 LINE L1 -567 5607 5423 271 239 52 0 chr20 49918667 49918759 -22235123 - L1ME3 LINE L1 -211 5951 5854 * 2241 111 0 43 chr20 49918950 49919274 -22234608 - AluSx SINE Alu -2 310 1 623 279 122 54 chr20 49919279 49919705 -22234177 - L2 LINE L2 -12 3301 2847 235 178 44 0 chr20 49920450 49920495 -22233387 - L2 LINE L2 -1 3271 3225 792 191 0 0 chr20 49920591 49920764 -22233118 + GA-rich Low_complexity Low_complexity 4 176 0 914 186 166 0 chr20 49920862 49921109 -22232773 - MER33 DNA MER1_type 0 324 37 276 169 34 101 chr20 49921340 49921429 -22232453 + L2 LINE L2 3153 3235 -37 854 208 22 22 chr20 49921521 49921704 -22232178 - MER5A DNA MER1_type -6 183 1 1749 105 0 0 chr20 49921808 49922036 -22231846 + 7SLRNA srpRNA srpRNA 5 232 -88 1634 196 152 34 chr20 49922447 49922771 -22231111 - MLT1F LTR MaLR -8 534 135 2309 92 34 0 chr20 49922771 49923065 -22230817 - AluSx SINE Alu -8 304 1 1634 196 152 34 chr20 49923065 49923214 -22230668 - MLT1F LTR MaLR -407 135 5 504 278 127 12 chr20 49923384 49923557 -22230325 - MIR SINE MIR -19 243 51 576 235 25 55 chr20 49923844 49924044 -22229838 + MIR SINE MIR 69 262 0 2367 89 7 3 chr20 49925007 49925309 -22228573 - AluSq SINE Alu -10 303 1 1235 218 73 6 chr20 49925347 49925664 -22228218 - MER58B DNA MER1_type -3 338 1 181 361 0 0 chr20 49925701 49925762 -22228120 - L3 LINE CR1 -50 1527 1467 899 250 133 44 chr20 49925866 49926294 -22227588 - L1ME4a LINE L1 -6 6115 5650 2334 90 3 10 chr20 49926349 49926648 -22227234 - AluSq SINE Alu -16 297 1 300 173 67 0 chr20 49926732 49926807 -22227075 - L1ME1 LINE L1 -165 6001 5922 263 305 28 0 chr20 49926862 49927003 -22226879 - L1M4 LINE L1 -3800 2346 2202 429 251 155 64 chr20 49927568 49927787 -22226095 + MIR SINE MIR 24 262 0 228 176 0 39 chr20 49928277 49928328 -22225554 + GA-rich Low_complexity Low_complexity 5 53 0 24 0 0 0 chr20 49928585 49928609 -22225273 + AT_rich Low_complexity Low_complexity 1 24 0 301 211 211 10 chr20 49928610 49928714 -22225168 - L2 LINE L2 -1 3312 3188 307 346 10 10 chr20 49929294 49929398 -22224484 - L2 LINE L2 -190 3082 2979 2057 122 14 10 chr20 49929421 49929715 -22224167 + AluJb SINE Alu 1 295 -17 1345 202 56 0 chr20 49929715 49930002 -22223880 - L1ME1 LINE L1 -374 5804 5502 684 210 15 132 chr20 49930920 49931192 -22222690 + MIR SINE MIR 2 241 -21 880 201 0 30 chr20 49931386 49931581 -22222301 - FRAM SINE Alu 0 176 1 556 267 46 74 chr20 49931744 49932084 -22221798 - L2 LINE L2 -159 3113 2782 232 222 28 56 chr20 49932760 49932832 -22221050 + L2 LINE L2 3191 3260 -12 404 241 54 9 chr20 49932878 49932990 -22220892 - MIR SINE MIR -75 187 71 235 279 59 0 chr20 49933255 49933323 -22220559 - MER91C DNA MER1_type -17 123 52 1293 189 0 0 chr20 49933419 49933641 -22220241 - MER58A DNA MER1_type 0 224 3 737 171 0 16 chr20 49933691 49933820 -22220062 + FLAM_A SINE Alu 1 127 -6 1643 120 127 0 chr20 49933826 49934093 -22219789 + AluY SINE Alu 1 301 0 815 163 0 34 chr20 49934108 49934255 -22219627 + FLAM_C SINE Alu 1 142 -1 275 340 84 39 chr20 49934588 49934791 -22219091 + MIR SINE MIR 3 214 -48 2325 125 0 0 chr20 49934801 49935112 -22218770 - AluSx SINE Alu -1 311 1 23 0 0 0 chr20 49935119 49935142 -22218740 + AT_rich Low_complexity Low_complexity 1 23 0 216 320 78 29 chr20 49935867 49935970 -22217912 - L2 LINE L2 -47 3225 3118 180 0 0 0 chr20 49936089 49936109 -22217773 + (TG)n Simple_repeat Simple_repeat 2 21 0 196 382 30 15 chr20 49936145 49936276 -22217606 - L2 LINE L2 -263 3009 2877 435 238 38 9 chr20 49936331 49936436 -22217446 + MER91C DNA MER1_type 12 119 -21 288 336 26 0 chr20 49936440 49936556 -22217326 - L2 LINE L2 -493 2821 2703 596 216 146 16 chr20 49936570 49936755 -22217127 + MER3 DNA MER1_type 1 209 0 925 277 97 12 chr20 49937379 49937700 -22216182 - MER115 DNA AcHobo -328 365 18 468 0 0 0 chr20 49937913 49937965 -22215917 + (CA)n Simple_repeat Simple_repeat 2 53 0 604 301 82 0 chr20 49938143 49938349 -22215533 - MIR SINE MIR -28 234 12 258 279 0 0 chr20 49938368 49938436 -22215446 + MIR SINE MIR 195 262 0 236 207 17 0 chr20 49938483 49938541 -22215341 + MIR SINE MIR 112 170 -92 415 300 140 12 chr20 49939198 49939455 -22214427 + L2 LINE L2 2593 2882 -432 347 310 31 8 chr20 49939654 49939783 -22214099 + L2 LINE L2 3141 3272 0 842 186 108 0 chr20 49940241 49940446 -22213436 + MIR SINE MIR 30 262 0 272 262 55 103 chr20 49940447 49940554 -22213328 - MIR SINE MIR -7 255 155 2201 126 0 7 chr20 49940554 49940856 -22213026 + AluSx SINE Alu 1 300 -12 272 262 55 103 chr20 49940856 49940893 -22212989 - MIR SINE MIR -107 155 118 816 196 6 12 chr20 49940893 49941056 -22212826 + MER3 DNA MER1_type 1 162 -47 241 284 0 14 chr20 49941091 49941165 -22212717 - MIR SINE MIR -149 113 41 612 285 56 101 chr20 49941538 49942005 -22211877 - L2 LINE L2 0 3272 2827 563 267 88 58 chr20 49942004 49942244 -22211638 + MIR SINE MIR 16 262 0 * 202 361 0 0 chr20 49942264 49942325 -22211557 + (CTG)n Simple_repeat Simple_repeat 2 62 0 198 343 105 17 chr20 49942335 49942516 -22211366 - L2 LINE L2 -482 2832 2636 187 351 19 92 chr20 49943380 49943642 -22210240 + L2 LINE L2 2545 2787 -527 378 171 0 14 chr20 49944374 49944444 -22209438 - MIR SINE MIR -108 154 86 834 168 23 0 chr20 49944803 49945112 -22208770 + CT-rich Low_complexity Low_complexity 1 316 0 703 275 7 21 chr20 49945143 49945617 -22208265 + CT-rich Low_complexity Low_complexity 1 467 0 1445 149 15 8 chr20 49945629 49945897 -22207985 - L1MB3 LINE L1 -2 6181 5912 2293 92 3 0 chr20 49945901 49946206 -22207676 + AluSp SINE Alu 1 306 0 1067 156 0 0 chr20 49946216 49946376 -22207506 + AluSg/x SINE Alu 136 295 -17 3824 176 94 8 chr20 49946376 49947566 -22206316 - L1MB3 LINE L1 -263 5920 4606 2089 124 0 0 chr20 49947574 49947883 -22205999 + AluSx SINE Alu 11 319 0 337 44 0 0 chr20 49947895 49947940 -22205942 - MADE1 DNA Mariner -35 45 1 1609 166 22 78 chr20 49998080 49998143 -22155739 - MLT1B LTR MaLR -3 387 322 2306 113 0 0 chr20 49998143 49998444 -22155438 + AluSx SINE Alu 1 301 -11 1609 166 22 78 chr20 49998444 49998790 -22155092 - MLT1B LTR MaLR -68 322 1 1727 185 45 0 chr20 49998829 49999121 -22154761 - AluJo SINE Alu -7 305 1 2101 199 84 0 chr20 49999125 49999588 -22154294 - L1M4 LINE L1 -945 5201 4700 385 271 66 0 chr20 50000780 50000904 -22152978 + MIR SINE MIR 24 147 -61 219 292 67 22 chr20 50002732 50002821 -22151061 + MIR SINE MIR 59 151 -111 342 213 67 0 chr20 50003641 50003716 -22150166 - MIR SINE MIR -70 192 113 538 297 28 22 chr20 50004055 50004237 -22149645 + MIR SINE MIR 35 217 -45 2203 117 3 0 chr20 50004244 50004543 -22149339 + AluSx SINE Alu 5 304 -8 234 323 213 0 chr20 50004847 50004974 -22148908 - L2 LINE L2 0 3272 3119 181 311 14 14 chr20 50005037 50005111 -22148771 + MIR SINE MIR 40 113 -149 2005 156 0 16 chr20 50005186 50005500 -22148382 + AluJb SINE Alu 1 309 -3 282 256 39 45 chr20 50005651 50005807 -22148075 - L2 LINE L2 -300 2972 2818 524 294 35 6 chr20 50006162 50006332 -22147550 - MIR SINE MIR -21 241 67 360 277 30 0 chr20 50006805 50006906 -22146976 + MIR SINE MIR 46 149 -113 1157 154 0 66 chr20 50007138 50007365 -22146517 + MER20 DNA MER1_type 3 214 -5 320 298 30 76 chr20 50007370 50007501 -22146381 + L2 LINE L2 3148 3272 0 1208 108 0 6 chr20 50008484 50008650 -22145232 - AluY SINE Alu -146 165 1 1514 250 79 23 chr20 50008775 50009475 -22144407 + L1MDa LINE L1 1967 2702 -3838 243 164 213 0 chr20 50009473 50009534 -22144348 + L1M4 LINE L1 5615 5688 -490 * 768 190 15 36 chr20 50009534 50009729 -22144153 - L1MD2 LINE L1 -363 5996 5806 364 156 13 39 chr20 50009763 50009840 -22144042 - L1ME1 LINE L1 -89 6077 6003 312 104 60 0 chr20 50010096 50010163 -22143719 + L1MB2 LINE L1 6101 6171 0 279 316 13 0 chr20 50011064 50011140 -22142742 - L3 LINE CR1 -3 1574 1498 451 228 177 25 chr20 50011215 50011373 -22142509 + MER5A DNA MER1_type 7 188 -1 292 276 95 9 chr20 50011790 50011895 -22141987 - MIR SINE MIR -50 212 99 238 185 0 74 chr20 50012058 50012112 -22141770 - L2 LINE L2 -5 3308 3259 1955 115 14 11 chr20 50012152 50012431 -22141451 + AluSx SINE Alu 1 280 -32 219 103 0 0 chr20 50012434 50012473 -22141409 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 217 189 57 38 chr20 50012503 50012556 -22141326 - L2 LINE L2 -4 3268 3215 416 272 103 27 chr20 50012575 50012759 -22141123 - MIR3 SINE MIR 0 208 11 1736 212 147 24 chr20 50013270 50014000 -22139882 + L2 LINE L2 2492 3310 -3 184 212 0 0 chr20 50014060 50014093 -22139789 + L2 LINE L2 3229 3261 -52 1233 127 0 0 chr20 50015517 50015682 -22138200 - AluJb SINE Alu -63 249 85 2125 129 0 3 chr20 50015847 50016158 -22137724 - AluSx SINE Alu -2 310 1 2531 76 0 0 chr20 50016369 50016673 -22137209 + AluSq SINE Alu 1 304 -9 41 0 0 0 chr20 50016682 50016723 -22137159 + AT_rich Low_complexity Low_complexity 1 41 0 648 118 0 0 chr20 50016750 50016835 -22137047 + AluJ/FLAM SINE Alu 7 91 -221 441 163 279 0 chr20 50016828 50016914 -22136968 - AluJb SINE Alu -121 191 82 * 259 208 0 0 chr20 50017060 50017113 -22136769 + MLT1I LTR MaLR 86 138 -271 890 150 9 112 chr20 50017374 50017545 -22136337 + MER3 DNA MER1_type 1 143 -66 2227 137 0 0 chr20 50017545 50017858 -22136024 - AluSq SINE Alu 0 313 1 890 150 9 112 chr20 50017858 50017919 -22135963 + MER3 DNA MER1_type 143 209 0 2120 121 7 3 chr20 50017982 50018271 -22135611 + AluSx SINE Alu 1 290 -22 755 209 16 22 chr20 50018287 50018469 -22135413 - MLT1C LTR MaLR 0 467 287 1321 205 88 92 chr20 50018477 50018704 -22135178 + MLT2B1 LTR ERVL 1 227 -293 2435 97 10 0 chr20 50018704 50019014 -22134868 - AluSp SINE Alu 0 313 1 1321 205 88 92 chr20 50019014 50019130 -22134752 + MLT2B1 LTR ERVL 227 342 -178 2027 132 146 13 chr20 50019130 50019508 -22134374 + MSTA LTR MaLR 1 428 0 1321 205 88 92 chr20 50019508 50019685 -22134197 + MLT2B1 LTR ERVL 342 520 0 620 203 74 88 chr20 50019713 50019799 -22134083 - MLT1C LTR MaLR -189 278 192 1861 110 110 11 chr20 50019799 50020080 -22133802 - AluSg1 SINE Alu 0 309 1 620 203 74 88 chr20 50020080 50020210 -22133672 - MLT1C LTR MaLR -275 192 65 184 287 89 50 chr20 50020703 50020804 -22133078 + L2 LINE L2 2928 3032 -240 4621 258 100 47 chr20 50020994 50022790 -22131092 + HAL1 LINE L1 74 1773 -734 1490 144 88 35 chr20 50022790 50022902 -22130980 + AluJo SINE Alu 1 106 -206 1814 174 40 0 chr20 50022902 50023200 -22130682 + AluJo SINE Alu 1 310 -2 1490 144 88 35 chr20 50023200 50023371 -22130511 + AluJo SINE Alu 106 299 -13 4621 258 100 47 chr20 50023371 50023689 -22130193 + HAL1 LINE L1 1773 2073 -434 1886 164 0 4 chr20 50023689 50023970 -22129912 - AluSx SINE Alu -32 280 1 4621 258 100 47 chr20 50023970 50024023 -22129859 + HAL1 LINE L1 2073 2122 -385 2344 85 7 0 chr20 50024023 50024318 -22129564 + AluSp SINE Alu 2 298 -15 4621 258 100 47 chr20 50024318 50024459 -22129423 + HAL1 LINE L1 2122 2507 0 2003 148 26 0 chr20 50024477 50024781 -22129101 + AluSx SINE Alu 1 312 0 1687 188 3 17 chr20 50024885 50025178 -22128704 + AluJo SINE Alu 1 289 -23 2221 97 4 0 chr20 50025313 50025619 -22128263 - AluSp SINE Alu 0 311 5 344 266 58 27 chr20 50025625 50025813 -22128069 - L1M4 LINE L1 -3820 2326 2133 228 163 0 0 chr20 50025853 50025896 -22127986 + CT-rich Low_complexity Low_complexity 1 43 0 2235 104 0 36 chr20 50025918 50026152 -22127730 - AluSg SINE Alu 0 368 149 2190 93 39 0 chr20 50026152 50026432 -22127450 - AluY SINE Alu -16 295 5 2235 104 0 36 chr20 50026432 50026574 -22127308 - AluSg SINE Alu -219 149 3 466 261 75 32 chr20 50026994 50027182 -22126700 + LTR16C LTR ERVL 287 482 -9 2840 131 26 12 chr20 50027409 50027829 -22126053 - MSTB LTR MaLR 0 426 1 255 304 49 90 chr20 50027896 50028034 -22125848 + L2 LINE L2 1981 2104 -1210 2114 100 59 3 chr20 50028034 50028323 -22125559 - AluSx SINE Alu -7 305 1 255 304 49 90 chr20 50028323 50028450 -22125432 + L2 LINE L2 2104 2235 -1079 344 327 18 9 chr20 50028460 50028573 -22125309 - L2 LINE L2 -2 3270 3157 201 274 20 39 chr20 50028612 50028714 -22125168 + (TTCA)n Simple_repeat Simple_repeat 1 100 0 219 69 0 0 chr20 50028739 50028768 -22125114 + (TCCA)n Simple_repeat Simple_repeat 1 29 0 306 132 0 0 chr20 50028837 50028890 -22124992 + (GGA)n Simple_repeat Simple_repeat 3 55 0 197 213 93 67 chr20 50028896 50028971 -22124911 + MER5A DNA MER1_type 92 168 -21 389 273 98 8 chr20 50029044 50029176 -22124706 - LTR16C LTR ERVL -2 489 346 354 274 0 69 chr20 50029469 50029571 -22124311 + L2 LINE L2 3215 3309 -4 921 183 35 70 chr20 50029977 50030234 -22123648 + MER96B DNA MER1_type? 1 248 -169 1834 158 3 17 chr20 50030288 50030579 -22123303 + AluJb SINE Alu 1 287 -25 183 80 0 0 chr20 50032486 50032511 -22121371 + (CA)n Simple_repeat Simple_repeat 1 25 0 347 258 103 62 chr20 50033078 50033272 -22120610 + L2 LINE L2 3108 3309 -4 767 123 9 0 chr20 50035547 50035661 -22118221 + AluY SINE Alu 155 269 -42 1364 104 0 6 chr20 50035661 50035844 -22118038 - AluY SINE Alu -129 182 1 480 253 59 12 chr20 50036360 50036530 -22117352 - L1ME3A LINE L1 0 6170 5993 2243 118 3 0 chr20 50037578 50037883 -22115999 + AluSq SINE Alu 1 306 -7 1685 196 3 7 chr20 50037886 50038182 -22115700 - AluJo SINE Alu -17 295 1 2477 71 0 0 chr20 50039320 50039616 -22114266 + AluSx SINE Alu 1 296 -16 1541 179 60 11 chr20 50040830 50041115 -22112767 + AluJo SINE Alu 1 299 -13 498 238 172 20 chr20 50041569 50041720 -22112162 - MIR SINE MIR -87 175 2 335 195 12 24 chr20 50041790 50041872 -22112010 - AluJo SINE Alu -1 301 221 1394 123 9 32 chr20 50041945 50042165 -22111717 - AluJo SINE Alu -97 215 1 996 119 0 182 chr20 50042473 50042709 -22111173 + 7SK RNA RNA 1 193 0 1660 247 79 79 chr20 50042937 50043520 -22110362 - MLT1G LTR MaLR -8 582 5 366 298 30 38 chr20 50044540 50044671 -22109211 + MIR SINE MIR 21 150 -112 388 293 177 9 chr20 50045133 50045348 -22108534 - L3 LINE CR1 -7 1570 1320 1834 161 3 10 chr20 50045621 50045920 -22107962 - AluJb SINE Alu -15 297 1 195 261 0 46 chr20 50047462 50047527 -22106355 + L2 LINE L2 3202 3263 -9 345 218 50 20 chr20 50048017 50048118 -22105764 + L1ME1 LINE L1 6010 6113 -53 22 56 0 0 chr20 50048136 50048172 -22105710 + AT_rich Low_complexity Low_complexity 1 36 0 254 248 193 0 chr20 50048612 50048721 -22105161 - L1ME4a LINE L1 -100 6021 5892 303 263 96 56 chr20 50048850 50049048 -22104834 - L2 LINE L2 -344 2970 2765 216 328 141 16 chr20 50049118 50049246 -22104636 + MIR SINE MIR 100 243 -19 2528 205 72 4 chr20 50049258 50049784 -22104098 - MER68 LTR ERV1 0 562 1 255 272 105 18 chr20 50049815 50049929 -22103953 - L2 LINE L2 -568 2746 2623 420 240 161 21 chr20 50050018 50050210 -22103672 + L2 LINE L2 2841 3059 -213 477 232 189 46 chr20 50051252 50051558 -22102324 - L1ME4a LINE L1 -2 6119 5770 1028 168 0 12 chr20 50053240 50053407 -22100475 + FAM SINE Alu 1 165 -10 221 388 78 0 chr20 50053478 50053607 -22100275 - MIR3 SINE MIR -54 154 16 4224 159 41 51 chr20 50054251 50054289 -22099593 - L1MB2 LINE L1 -12 6159 6122 2265 104 0 3 chr20 50054289 50054588 -22099294 - AluY SINE Alu -13 298 1 4224 159 41 51 chr20 50054588 50055714 -22098168 - L1MB2 LINE L1 -49 6122 5003 355 308 118 65 chr20 50055738 50055919 -22097963 + HAL1b LINE L1 172 373 -975 2194 119 7 0 chr20 50055919 50056212 -22097670 + AluSx SINE Alu 1 295 -17 355 308 118 65 chr20 50056212 50056293 -22097589 + HAL1b LINE L1 373 448 -900 333 327 82 72 chr20 50056316 50056438 -22097444 + L1M4 LINE L1 3191 3310 -2836 1524 191 77 4 chr20 50056438 50056710 -22097172 + AluJo SINE Alu 1 292 -20 333 327 82 72 chr20 50056710 50057125 -22096757 + L1M4 LINE L1 3310 3733 -2413 2388 92 0 0 chr20 50057175 50057478 -22096404 + AluSc SINE Alu 1 303 -6 239 157 126 81 chr20 50057494 50057628 -22096254 - MLT1J2 LTR MaLR -1 449 313 305 348 17 0 chr20 50057683 50057801 -22096081 - MLT1I LTR MaLR -203 206 87 288 0 0 0 chr20 50057858 50057890 -22095992 + (TG)n Simple_repeat Simple_repeat 1 32 0 374 293 68 31 chr20 50057961 50058152 -22095730 - L1MEc LINE L1 -4363 2033 1836 1187 169 0 47 chr20 50058162 50058297 -22095585 + AluJo SINE Alu 1 124 -188 2564 81 0 0 chr20 50058297 50058605 -22095277 + AluSc SINE Alu 2 309 0 1187 169 0 47 chr20 50058605 50058682 -22095200 + AluJo SINE Alu 124 203 -109 576 169 134 7 chr20 50058694 50058836 -22095046 + L1M3 LINE L1 5480 5639 -529 660 213 0 0 chr20 50058844 50058971 -22094911 - Tigger3(Golem) DNA MER2_type -2 3027 2901 336 213 0 0 chr20 50058967 50059028 -22094854 - Tigger3(Golem) DNA MER2_type -2966 63 3 * 1391 77 6 0 chr20 50059168 50059338 -22094544 - AluSp SINE Alu -142 171 1 782 245 65 40 chr20 50059416 50059514 -22094368 - MER46C DNA MER2_type -8 330 236 867 196 92 0 chr20 50059514 50059687 -22094195 - MER5A DNA MER1_type 0 189 1 782 245 65 40 chr20 50059687 50059756 -22094126 - MER46C DNA MER2_type -102 236 170 2506 74 6 6 chr20 50059756 50060068 -22093814 + AluSx SINE Alu 1 312 0 782 245 65 40 chr20 50060068 50060221 -22093661 - MER46C DNA MER2_type -168 170 1 1058 201 68 58 chr20 50060536 50060886 -22092996 - MLT1G3 LTR MaLR -2 528 187 350 208 106 116 chr20 50060935 50061162 -22092720 - MLT1G1 LTR MaLR -303 292 67 1944 151 43 48 chr20 50061162 50061455 -22092427 - MLT1B LTR MaLR 0 390 98 2348 105 3 10 chr20 50061455 50061769 -22092113 - AluSx SINE Alu 0 312 1 1944 151 43 48 chr20 50061769 50061867 -22092015 - MLT1B LTR MaLR -292 98 1 350 208 106 116 chr20 50061867 50061932 -22091950 - MLT1G1 LTR MaLR -528 67 3 309 321 14 21 chr20 50061959 50062099 -22091783 + L2 LINE L2 2878 3016 -256 680 263 150 5 chr20 50062192 50062405 -22091477 - MIR SINE MIR -7 255 12 258 309 0 12 chr20 50062647 50062731 -22091151 + MLT1H1 LTR MaLR 21 103 -439 872 224 107 37 chr20 50062806 50063133 -22090749 + MLT1H1 LTR MaLR 201 549 -6 341 244 41 32 chr20 50063355 50063478 -22090404 - MLT1K LTR MaLR -112 476 353 338 50 90 10 chr20 50063838 50063938 -22089944 + (TA)n Simple_repeat Simple_repeat 1 108 0 2008 136 3 3 chr20 50063938 50064224 -22089658 - AluSx SINE Alu -26 286 1 25 31 0 0 chr20 50064274 50064306 -22089576 + AT_rich Low_complexity Low_complexity 1 32 0 267 262 28 57 chr20 50064361 50064502 -22089380 + L1MC/D LINE L1 5688 5824 -1984 379 320 89 27 chr20 50064645 50065051 -22088831 + L1ME3A LINE L1 4570 5000 -1146 * 570 256 70 70 chr20 50065046 50065147 -22088735 + L1ME3A LINE L1 5764 5864 -306 1916 118 24 38 chr20 50065147 50065464 -22088418 + AluSx SINE Alu 1 313 0 1713 183 0 30 chr20 50065472 50065767 -22088115 + AluJo SINE Alu 1 286 -26 570 256 70 70 chr20 50065767 50066038 -22087844 + L1ME3A LINE L1 5870 6146 -24 2275 112 0 0 chr20 50066052 50066346 -22087536 - AluSx SINE Alu -18 294 1 25 31 0 0 chr20 50067275 50067307 -22086575 + AT_rich Low_complexity Low_complexity 1 32 0 348 242 91 0 chr20 50067840 50067939 -22085943 - MIR SINE MIR -39 223 116 250 118 0 0 chr20 50067981 50068015 -22085867 - LTR33 LTR ERVL -253 268 235 2243 93 0 17 chr20 50068313 50068628 -22085254 + AluSq SINE Alu 1 310 0 627 271 70 54 chr20 50068635 50069179 -22084703 - L1ME3A LINE L1 -255 5915 5365 362 153 0 141 chr20 50069222 50069307 -22084575 + Tigger2 DNA MER2_type 1 73 -2645 307 299 58 90 chr20 50069859 50069884 -22083998 - L2 LINE L2 -1 3271 3247 1566 161 19 68 chr20 50069884 50070025 -22083857 + AluJo SINE Alu 2 148 -164 2094 143 0 0 chr20 50070025 50070319 -22083563 + AluSx SINE Alu 1 294 -18 1566 161 19 68 chr20 50070319 50070501 -22083381 + AluJo SINE Alu 148 309 -3 307 299 58 90 chr20 50070501 50070600 -22083282 - L2 LINE L2 -25 3247 3146 1554 174 72 72 chr20 50070600 50070873 -22083009 - MLT1B LTR MaLR 0 390 115 2132 138 0 3 chr20 50070873 50071184 -22082698 - AluSx SINE Alu -2 310 1 1554 174 72 72 chr20 50071184 50071300 -22082582 - MLT1B LTR MaLR -274 116 1 307 299 58 90 chr20 50071300 50071519 -22082363 - L2 LINE L2 -126 3146 2938 271 236 36 45 chr20 50071636 50071746 -22082136 - MER5A DNA MER1_type -28 161 53 1452 274 110 36 chr20 50071746 50071917 -22081965 - L1MC4 LINE L1 0 8042 7885 1636 164 41 7 chr20 50071917 50072064 -22081818 + AluJo SINE Alu 1 141 -171 2307 102 0 7 chr20 50072064 50072369 -22081513 + AluSc SINE Alu 1 303 -6 1636 164 41 7 chr20 50072369 50072513 -22081369 + AluJo SINE Alu 141 302 -10 1452 274 110 36 chr20 50072513 50073180 -22080702 - L1MC4 LINE L1 -157 7885 7142 590 99 11 0 chr20 50073180 50073271 -22080611 + (TTCC)n Simple_repeat Simple_repeat 2 93 0 2200 135 0 0 chr20 50073283 50073586 -22080296 - AluSx SINE Alu -9 303 1 189 94 0 31 chr20 50073587 50073619 -22080263 - MER5A DNA MER1_type -115 74 44 2601 167 16 16 chr20 50073852 50074295 -22079587 + MSTB2 LTR MaLR 11 453 -4 403 267 19 9 chr20 50074448 50074553 -22079329 - MER5B DNA MER1_type -72 106 1 2377 95 0 0 chr20 50074592 50074896 -22078986 + AluY SINE Alu 1 304 -7 1360 132 93 107 chr20 50075460 50075770 -22078112 + AluJo SINE Alu 1 306 -6 1983 128 45 0 chr20 50075780 50076068 -22077814 + AluSx SINE Alu 1 301 -11 2553 48 0 0 chr20 50076202 50076496 -22077386 - AluY SINE Alu -17 294 1 4633 142 52 46 chr20 50076811 50077255 -22076627 - L1MB8 LINE L1 0 6178 5738 2867 3 0 0 chr20 50077255 50077557 -22076325 - AluYa5 SINE Alu -9 302 1 4633 142 52 46 chr20 50077557 50077959 -22075923 - L1MB8 LINE L1 -440 5738 5324 1573 123 0 4 chr20 50077959 50078186 -22075696 - AluSg/x SINE Alu 0 312 87 4633 142 52 46 chr20 50078186 50078247 -22075635 - L1MB8 LINE L1 -854 5324 5265 2049 132 0 14 chr20 50078463 50078758 -22075124 + AluSx SINE Alu 9 299 -13 260 203 68 0 chr20 50078821 50078880 -22075002 + L1MC/D LINE L1 5812 5874 -1934 641 118 0 11 chr20 50079020 50079113 -22074769 + FLAM_A SINE Alu 19 110 -32 1519 181 64 3 chr20 50079233 50079515 -22074367 - AluJb SINE Alu -13 299 1 1015 206 100 98 chr20 50079528 50079933 -22073949 - L1MC5 LINE L1 -36 7925 7517 1650 175 3 67 chr20 50079933 50080264 -22073618 - AluSx SINE Alu -2 310 1 1015 206 100 98 chr20 50080264 50080408 -22073474 - L1MC5 LINE L1 -444 7517 7375 692 241 47 34 chr20 50080425 50080661 -22073221 + LTR33 LTR ERVL 18 256 -265 451 194 35 76 chr20 50080851 50080995 -22072887 - L1MC5 LINE L1 -578 7383 7246 1930 116 65 0 chr20 50081039 50081331 -22072551 - AluSx SINE Alu -1 311 1 659 183 8 0 chr20 50081405 50081531 -22072351 + AluSg/x SINE Alu 182 308 -1 948 196 81 61 chr20 50081550 50081846 -22072036 - L1MC5 LINE L1 -808 7153 6852 203 88 29 0 chr20 50081851 50081885 -22071997 + (TTG)n Simple_repeat Simple_repeat 2 36 0 1793 117 0 4 chr20 50081887 50082126 -22071756 - AluSx SINE Alu -22 290 53 306 290 63 115 chr20 50082184 50082688 -22071194 - L1MC4a LINE L1 -1217 6591 6114 2079 113 3 7 chr20 50083455 50083738 -22070144 - AluSq SINE Alu -31 282 1 1895 107 0 11 chr20 50084509 50084779 -22069103 + AluSc SINE Alu 1 267 -42 1565 149 83 7 chr20 50084940 50085242 -22068640 + MER33 DNA MER1_type 1 323 -1 585 255 83 10 chr20 50085311 50085515 -22068367 - MIR SINE MIR 0 262 44 418 229 166 19 chr20 50085921 50086078 -22067804 + MIR3 SINE MIR 28 207 -1 404 192 0 13 chr20 50086846 50086924 -22066958 - LTR33A LTR ERVL -3 520 444 1982 199 64 42 chr20 50086949 50087492 -22066390 + L1MB2 LINE L1 4837 5411 -760 2356 114 0 3 chr20 50087492 50087800 -22066082 + AluSx SINE Alu 1 307 -5 1982 199 64 42 chr20 50087800 50088042 -22065840 + L1MB2 LINE L1 5411 5646 -525 711 213 0 0 chr20 50088043 50088170 -22065712 - Tigger3(Golem) DNA MER2_type 0 3037 2911 355 213 0 0 chr20 50088166 50088227 -22065655 - Tigger3(Golem) DNA MER2_type -2966 63 3 * 2204 160 8 5 chr20 50088229 50088598 -22065284 + L1MB2 LINE L1 5645 6014 -157 1410 247 16 30 chr20 50088604 50088973 -22064909 - MLT1A1 LTR MaLR 0 365 2 5970 215 44 51 chr20 50088974 50090374 -22063508 - MLT1A1-int LTR MaLR 0 1735 345 1423 134 112 34 chr20 50090531 50090800 -22063082 + AluJo SINE Alu 1 290 -22 195 42 0 0 chr20 50090809 50090833 -22063049 + (TAGA)n Simple_repeat Simple_repeat 3 26 0 361 240 90 0 chr20 50091580 50091680 -22062202 - L1MC5 LINE L1 -76 7885 7777 1086 212 23 23 chr20 50091692 50091956 -22061926 - L1ME1 LINE L1 -121 6045 5782 344 333 40 5 chr20 50092367 50092568 -22061314 + L1ME4a LINE L1 3738 3945 -2201 2226 188 37 26 chr20 50092795 50093257 -22060625 + MLT1C LTR MaLR 1 467 0 656 316 34 4 chr20 50093261 50093495 -22060387 - MIR SINE MIR -10 252 12 398 262 19 0 chr20 50093514 50093617 -22060265 + L1ME4a LINE L1 4746 4850 -1296 795 275 121 50 chr20 50093988 50094780 -22059102 + L1ME4a LINE L1 5267 6114 -7 22 0 0 0 chr20 50094830 50094852 -22059030 + AT_rich Low_complexity Low_complexity 1 22 0 222 279 19 39 chr20 50095070 50095174 -22058708 - MIR SINE MIR 0 262 161 2320 118 19 19 chr20 50095282 50095654 -22058228 + THE1C LTR MaLR 4 375 0 838 234 60 67 chr20 50096872 50097171 -22056711 + MER69 DNA AcHobo 13 309 -2217 222 37 0 0 chr20 50097235 50097262 -22056620 + (TATG)n Simple_repeat Simple_repeat 2 28 0 1839 154 7 0 chr20 50097270 50097550 -22056332 - AluJo SINE Alu -25 287 6 303 270 0 27 chr20 50097557 50097631 -22056251 + MER69 DNA AcHobo 328 399 -2127 * 1634 222 118 15 chr20 50097625 50098151 -22055731 + MER69 DNA AcHobo 1947 2526 0 347 205 64 0 chr20 50098151 50098229 -22055653 - MIR SINE MIR -99 163 81 3434 145 46 16 chr20 50099664 50100230 -22053652 - LTR1 LTR ERV1 0 785 203 237 132 0 0 chr20 50100230 50100268 -22053614 - LTR1 LTR ERV1 -539 246 209 360 165 0 25 chr20 50100268 50100347 -22053535 - LTR1 LTR ERV1 -533 252 176 6359 54 13 4 chr20 50100358 50101140 -22052742 - L1PA6 LINE L1 0 6154 5366 774 215 63 34 chr20 50101240 50101445 -22052437 - LTR1 LTR ERV1 -372 413 203 279 149 0 0 chr20 50101439 50101486 -22052396 - LTR1 LTR ERV1 -533 252 206 * 1277 88 61 103 chr20 50101483 50101573 -22052309 - LTR1 LTR ERV1 -533 252 160 7170 54 2 0 chr20 50101573 50102904 -22050978 - L1PA6 LINE L1 0 6154 4816 1277 88 61 103 chr20 50102904 50103076 -22050806 - LTR1 LTR ERV1 -625 160 1 220 324 0 0 chr20 50103191 50103265 -22050617 - MIR SINE MIR -102 106 33 266 320 49 0 chr20 50104383 50104505 -22049377 + MIR SINE MIR 120 247 -15 356 305 45 45 chr20 50104605 50104759 -22049123 + L2 LINE L2 3159 3312 -1 405 260 87 35 chr20 50104876 50105049 -22048833 + MIR SINE MIR 53 234 -28 1128 244 0 9 chr20 50105617 50105834 -22048048 - MER58A DNA MER1_type -9 215 1 526 152 83 83 chr20 50106266 50106364 -22047518 - MIR SINE MIR 0 262 162 4725 43 30 28 chr20 50106364 50106969 -22046913 - LTR14B LTR ERVK -2 606 1 526 152 83 83 chr20 50106969 50107015 -22046867 - MIR SINE MIR -99 163 118 521 241 62 12 chr20 50107552 50107714 -22046168 + MIR SINE MIR 65 234 -28 275 284 42 11 chr20 50107734 50107829 -22046053 - MIR SINE MIR -105 157 60 297 274 145 46 chr20 50107966 50108269 -22045613 - L2 LINE L2 -74 3239 2907 1596 165 8 4 chr20 50109159 50109420 -22044462 + AluJo SINE Alu 21 282 -30 244 249 48 47 chr20 50109453 50109566 -22044316 - MIR SINE MIR -53 155 44 735 254 83 31 chr20 50109752 50109980 -22043902 - MIR SINE MIR -22 240 1 584 202 73 79 chr20 50110890 50110985 -22042897 + MER45A DNA AcHobo 1 96 -1485 2313 104 7 0 chr20 50110985 50111292 -22042590 - AluSp SINE Alu -3 310 2 584 202 73 79 chr20 50111292 50111374 -22042508 + MER45A DNA AcHobo 96 177 -1 206 218 40 89 chr20 50111479 50111580 -22042302 + MIR SINE MIR 116 211 -51 1123 236 71 11 chr20 50111791 50112058 -22041824 + MER58 DNA MER1_type 2 284 -57 641 211 62 19 chr20 50112060 50112221 -22041661 + MLT1E1 LTR MaLR 1 168 -486 1128 220 108 10 chr20 50112227 50112522 -22041360 + MLT1B LTR MaLR 67 390 0 378 155 0 0 chr20 50112523 50112581 -22041301 + MER58 DNA MER1_type 2361 2418 -2 618 261 37 32 chr20 50113024 50113212 -22040670 + MIR SINE MIR 7 195 -67 251 226 24 40 chr20 50113776 50113900 -22039982 + L1M LINE L1 5266 5387 -793 1058 193 0 14 chr20 50115361 50115584 -22038298 + L1MA7 LINE L1 6071 6290 -1 223 216 40 0 chr20 50116215 50116289 -22037593 + CT-rich Low_complexity Low_complexity 1 77 0 2145 139 30 24 chr20 50116312 50116685 -22037197 + THE1C LTR MaLR 1 375 0 213 361 0 0 chr20 50116743 50116826 -22037056 - MIR SINE MIR -59 149 73 261 291 35 0 chr20 50117262 50117348 -22036534 + MIR SINE MIR 35 123 -85 1216 194 24 0 chr20 50117367 50117578 -22036304 + MER58A DNA MER1_type 1 216 -8 422 248 83 0 chr20 50117644 50117765 -22036117 + MER94 DNA DNA 1 131 -3 1093 228 22 41 chr20 50118123 50118439 -22035443 + MER46C DNA MER2_type 22 331 -7 227 292 0 34 chr20 50118814 50118903 -22034979 + CT-rich Low_complexity Low_complexity 2 87 0 334 239 0 0 chr20 50119373 50119444 -22034438 + Charlie5 DNA MER1_type 51 121 -2491 1554 190 26 6 chr20 50119468 50119815 -22034067 + Charlie5 DNA MER1_type 2263 2616 0 643 259 30 0 chr20 50119881 50120047 -22033835 + MIR SINE MIR 90 260 -2 599 286 6 6 chr20 50120485 50120663 -22033219 + L1MB8 LINE L1 6001 6178 0 192 321 167 0 chr20 50120844 50120928 -22032954 + MER5C DNA MER1_type 227 324 0 185 294 35 82 chr20 50121048 50121218 -22032664 + L2 LINE L2 2902 3063 -209 302 268 12 0 chr20 50121239 50121321 -22032561 + MIR SINE MIR 85 167 -95 314 288 64 8 chr20 50122026 50122151 -22031731 + MIR SINE MIR 81 212 -50 625 227 14 14 chr20 50122294 50122435 -22031447 + MLT1H LTR MaLR 29 169 -380 323 338 15 0 chr20 50122810 50122943 -22030939 + L3 LINE CR1 1337 1471 -106 189 121 0 0 chr20 50123311 50123344 -22030538 + (GA)n Simple_repeat Simple_repeat 1 33 0 1834 184 3 0 chr20 50123626 50123946 -22029936 - L1PB4 LINE L1 -12 6144 5824 596 191 37 44 chr20 50124600 50124736 -22029146 + MLT1J2 LTR MaLR 48 182 -268 416 266 158 6 chr20 50124772 50124930 -22028952 + MER5A DNA MER1_type 8 189 0 225 358 97 17 chr20 50124930 50125106 -22028776 + MLT1J2 LTR MaLR 197 386 -64 450 239 26 51 chr20 50126153 50126312 -22027570 + MIR SINE MIR 38 191 -63 422 249 172 12 chr20 50126384 50126553 -22027329 - MIR SINE MIR -1 261 66 786 241 45 0 chr20 50126605 50126804 -22027078 - MER3 DNA MER1_type -1 208 1 187 281 201 22 chr20 50126863 50127002 -22026880 - MIR3 SINE MIR -42 166 3 229 273 55 73 chr20 50127299 50127464 -22026418 + MIR SINE MIR 86 247 -15 2086 154 79 53 chr20 50128003 50128495 -22025387 + MLT1D LTR MaLR 1 505 0 326 281 10 10 chr20 50129452 50129548 -22024334 + GA-rich Low_complexity Low_complexity 3 98 0 185 200 36 0 chr20 50129565 50129620 -22024262 + GA-rich Low_complexity Low_complexity 2 58 0 194 205 0 0 chr20 50130528 50130567 -22023315 - MIR SINE MIR -65 197 159 213 238 0 0 chr20 50130668 50130748 -22023134 + (TG)n Simple_repeat Simple_repeat 2 81 0 685 314 50 63 chr20 50130805 50131427 -22022455 + L2 LINE L2 2324 2937 -377 263 357 0 9 chr20 50131608 50131720 -22022162 + L2 LINE L2 3200 3310 -3 194 298 18 0 chr20 50131829 50131886 -22021996 - MIR SINE MIR -105 157 100 275 357 138 5 chr20 50132315 50132539 -22021343 + L2 LINE L2 2708 2961 -353 2241 124 0 0 chr20 50132613 50132919 -22020963 - AluSx SINE Alu -5 307 2 391 96 0 0 chr20 50133470 50133522 -22020360 - MADE1 DNA Mariner -28 52 1 380 129 0 14 chr20 50134559 50134629 -22019253 + (CA)n Simple_repeat Simple_repeat 2 70 0 1495 249 63 18 chr20 50134767 50135213 -22018669 + MLT1C LTR MaLR 1 466 -1 2416 85 0 3 chr20 50135309 50135616 -22018266 - AluY SINE Alu -5 306 1 250 312 64 24 chr20 50135716 50135841 -22018041 - MIR SINE MIR -87 175 46 621 266 59 9 chr20 50136025 50136247 -22017635 - L1ME4a LINE L1 -227 5894 5662 290 295 199 33 chr20 50137351 50137622 -22016260 + L2 LINE L2 2932 3247 -25 22 35 0 0 chr20 50138172 50138201 -22015681 + AT_rich Low_complexity Low_complexity 1 29 0 272 224 17 0 chr20 50138284 50138342 -22015540 + GA-rich Low_complexity Low_complexity 3 61 0 766 263 58 5 chr20 50138384 50138608 -22015274 - MIR SINE MIR -21 241 6 225 255 0 0 chr20 50138714 50138761 -22015121 - L1MC/D LINE L1 -2000 5808 5762 593 196 0 0 chr20 50139381 50139488 -22014394 + AluSp/q SINE Alu 206 312 -1 787 242 45 14 chr20 50139554 50139777 -22014105 - MIR SINE MIR -27 235 6 418 114 63 13 chr20 50140574 50140653 -22013229 - MLT1A1-int LTR MaLR -1652 83 1 573 185 6 108 chr20 50140654 50140707 -22013175 - MLT1A1 LTR MaLR -1 364 307 2190 118 7 0 chr20 50140707 50141004 -22012878 + AluSx SINE Alu 1 299 -13 573 185 6 108 chr20 50141004 50141107 -22012775 - MLT1A1 LTR MaLR -58 307 224 225 0 0 0 chr20 50141270 50141295 -22012587 + (A)n Simple_repeat Simple_repeat 1 25 0 353 321 47 31 chr20 50141329 50141522 -22012360 + MIR SINE MIR 23 218 -44 498 255 38 38 chr20 50141722 50141879 -22012003 - MIR SINE MIR -39 223 67 257 259 244 0 chr20 50142539 50142670 -22011212 + MER5A DNA MER1_type 27 189 0 305 273 107 16 chr20 50143133 50143254 -22010628 + L2 LINE L2 3182 3313 0 386 300 61 44 chr20 50143342 50143522 -22010360 + MIR3 SINE MIR 23 205 -3 186 221 0 128 chr20 50144033 50144119 -22009763 + MIR SINE MIR 76 150 -112 188 67 33 0 chr20 50144323 50144353 -22009529 + (TCTCC)n Simple_repeat Simple_repeat 2 32 0 202 320 52 21 chr20 50145554 50145651 -22008231 + MIR SINE MIR 48 147 -115 274 204 0 0 chr20 50146336 50146385 -22007497 - L2 LINE L2 -14 3258 3210 613 209 130 3 chr20 50146491 50146631 -22007251 + MER33 DNA MER1_type 45 166 -2458 186 43 0 0 chr20 50146631 50146654 -22007228 + (TG)n Simple_repeat Simple_repeat 2 24 0 613 209 130 3 chr20 50146654 50146733 -22007149 + MER33 DNA MER1_type 166 363 0 401 296 177 66 chr20 50146747 50146976 -22006906 + L2 LINE L2 2825 3027 -286 261 0 0 0 chr20 50146976 50147005 -22006877 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 401 296 177 66 chr20 50147005 50147215 -22006667 + L2 LINE L2 3027 3313 0 477 227 114 28 chr20 50147319 50147495 -22006387 - LTR33 LTR ERVL -3 518 328 301 260 10 83 chr20 50147551 50147647 -22006235 - LTR33 LTR ERVL -351 170 82 255 302 94 18 chr20 50147875 50148206 -22005676 + L1ME LINE L1 4204 4559 -1587 192 40 0 0 chr20 50148453 50148478 -22005404 + (TG)n Simple_repeat Simple_repeat 1 25 0 22 35 0 0 chr20 50148657 50148686 -22005196 + AT_rich Low_complexity Low_complexity 1 29 0 2424 69 0 34 chr20 50148796 50149116 -22004766 + AluY SINE Alu 1 309 -2 248 279 35 12 chr20 50149231 50149317 -22004565 + L1ME LINE L1 5491 5578 -543 245 367 9 0 chr20 50149373 50149482 -22004400 + MIR SINE MIR 77 186 -76 1926 159 187 10 chr20 50149768 50149930 -22003952 + MER31B LTR ERV1 1 133 -333 1574 198 70 9 chr20 50149930 50150274 -22003608 - MLT1A1 LTR MaLR 0 365 1 1926 159 187 10 chr20 50150274 50150507 -22003375 + MER31B LTR ERV1 133 466 0 495 218 105 8 chr20 50150613 50150737 -22003145 - L2 LINE L2 0 3272 3137 697 233 37 19 chr20 50151506 50151715 -22002167 + L1M4 LINE L1 5460 5677 -497 1861 132 0 0 chr20 50152958 50153216 -22000666 + AluSx SINE Alu 1 258 -54 551 101 34 11 chr20 50153216 50153296 -22000586 + AluSg/x SINE Alu 218 302 -7 284 282 118 9 chr20 50154398 50154508 -21999374 + L2 LINE L2 3192 3313 0 2499 148 32 104 chr20 50154939 50155494 -21998388 + MLT2B2 LTR ERVL 1 515 0 24 0 0 0 chr20 50156249 50156273 -21997609 + AT_rich Low_complexity Low_complexity 1 24 0 1159 217 14 0 chr20 50156883 50157095 -21996787 + MER58A DNA MER1_type 10 224 0 460 336 40 16 chr20 50158904 50159157 -21994725 - MIR SINE MIR -3 259 1 6130 125 30 4 chr20 50159526 50160883 -21992999 + L1PB1 LINE L1 4766 6146 -5 270 288 86 37 chr20 50161236 50161516 -21992366 + LTR33 LTR ERVL 23 346 -175 300 346 0 44 chr20 50161650 50161809 -21992073 - MIR SINE MIR -63 199 48 310 282 8 32 chr20 50163334 50163458 -21990424 - MIR3 SINE MIR -5 203 83 366 267 0 0 chr20 50164534 50164624 -21989258 + MIR SINE MIR 159 248 -14 224 360 26 9 chr20 50165577 50165691 -21988191 - MIR3 SINE MIR -9 199 84 1655 210 60 14 chr20 50165711 50166009 -21987873 + MLT1A1 LTR MaLR 3 321 -44 1956 160 7 0 chr20 50166009 50166316 -21987566 + AluSx SINE Alu 1 309 -3 1655 210 60 14 chr20 50166316 50166364 -21987518 + MLT1A1 LTR MaLR 321 365 0 787 266 87 25 chr20 50167004 50167069 -21986813 + MER46C DNA MER2_type 2 62 -276 441 0 0 0 chr20 50167069 50167118 -21986764 + (TG)n Simple_repeat Simple_repeat 2 50 0 787 266 87 25 chr20 50167118 50167327 -21986555 + MER46C DNA MER2_type 62 293 -45 358 275 18 9 chr20 50167370 50167479 -21986403 - MIR SINE MIR -109 153 44 2003 187 65 50 chr20 50167976 50168016 -21985866 + MLT1C LTR MaLR 1 39 -428 2258 117 0 13 chr20 50168016 50168332 -21985550 + AluSx SINE Alu 1 312 0 2003 187 65 50 chr20 50168332 50168751 -21985131 + MLT1C LTR MaLR 39 467 0 502 296 50 6 chr20 50168779 50168938 -21984944 + MER5B DNA MER1_type 11 176 -2 180 270 32 48 chr20 50169138 50169201 -21984681 + MIR SINE MIR 201 262 0 233 311 40 14 chr20 50169669 50169743 -21984139 - L2 LINE L2 -95 3177 3102 27 0 0 0 chr20 50170418 50170445 -21983437 + AT_rich Low_complexity Low_complexity 1 27 0 8074 30 18 0 chr20 50170445 50171419 -21982463 - L1PA3 LINE L1 -1 6154 5177 1048 228 87 0 chr20 50172397 50172603 -21981279 + MER58A DNA MER1_type 1 224 0 207 184 0 0 chr20 50172686 50172724 -21981158 + L2 LINE L2 3261 3298 -15 2234 127 53 28 chr20 50173335 50173690 -21980192 - THE1B LTR MaLR 0 364 1 239 273 31 62 chr20 50173979 50174107 -21979775 - MIR3 SINE MIR -17 191 68 213 423 0 0 chr20 50175602 50175673 -21978209 + L2 LINE L2 3119 3189 -83 529 278 45 58 chr20 50175866 50176089 -21977793 + MIR SINE MIR 22 241 -21 345 196 18 131 chr20 50176150 50176318 -21977564 - MLT1J2 LTR MaLR 0 450 302 1685 224 36 14 chr20 50176326 50176683 -21977199 - MLT1A1 LTR MaLR 0 365 1 2069 175 11 35 chr20 50176961 50177333 -21976549 - MLT1A1 LTR MaLR -2 363 1 1265 121 0 24 chr20 50177849 50178055 -21975827 - AluSx SINE Alu -111 201 1 437 270 61 12 chr20 50178524 50178704 -21975178 - MIR SINE MIR -48 214 27 885 166 51 11 chr20 50179530 50179705 -21974177 + MER5A DNA MER1_type 8 189 0 996 278 91 7 chr20 50179721 50180139 -21973743 - MER113 DNA MER1_type? -8 513 61 586 279 27 6 chr20 50180328 50180511 -21973371 + MER5A DNA MER1_type 1 187 -2 273 301 175 14 chr20 50180522 50180665 -21973217 + MIR SINE MIR 19 184 -78 2003 146 0 40 chr20 50181180 50181502 -21972380 + AluSx SINE Alu 1 309 -3 366 303 58 53 chr20 50181622 50181810 -21972072 + MIR SINE MIR 33 221 -41 185 204 0 68 chr20 50182397 50182441 -21971441 - L2 LINE L2 -254 3059 3019 401 238 49 8 chr20 50182642 50182764 -21971118 - LTR33 LTR ERVL -5 516 390 1504 284 61 13 chr20 50182770 50183101 -21970781 - L2 LINE L2 -913 2401 2033 2184 116 0 0 chr20 50183101 50183385 -21970497 + AluSg SINE Alu 1 284 -26 1504 284 61 13 chr20 50183385 50183592 -21970290 - L2 LINE L2 -1281 2033 1837 1082 194 24 5 chr20 50183728 50183934 -21969948 - AluJo SINE Alu -8 304 95 344 213 67 0 chr20 50183976 50184051 -21969831 - AluJb SINE Alu -176 126 47 292 154 0 0 chr20 50184252 50184304 -21969578 - L1ME4a LINE L1 -224 5897 5846 1082 226 80 62 chr20 50184767 50185169 -21968713 - L1ME1 LINE L1 -7 6159 5751 295 208 39 13 chr20 50185682 50185759 -21968123 + MIR SINE MIR 174 252 -10 240 202 32 53 chr20 50186658 50186752 -21967130 - MER92B LTR ERV1 0 636 545 239 135 0 0 chr20 50186836 50186873 -21967009 - MER92A LTR ERV1 -323 89 53 1173 154 154 0 chr20 50186882 50187096 -21966786 - MER92B LTR ERV1 -389 247 1 7830 37 5 0 chr20 50187737 50189357 -21964525 + L1PA4 LINE L1 4518 6141 -14 4098 67 2 4 chr20 50189457 50189977 -21963905 + L1PA8A LINE L1 5592 6110 -21 296 304 75 71 chr20 50190061 50191080 -21962802 + L1ME4a LINE L1 3967 5003 -1143 189 107 0 0 chr20 50191080 50191108 -21962774 + (TTAA)n Simple_repeat Simple_repeat 3 30 0 296 304 75 71 chr20 50191108 50191299 -21962583 + L1ME4a LINE L1 5003 5192 -954 410 297 78 26 chr20 50191712 50192018 -21961864 + L1ME4a LINE L1 5643 5964 -157 1175 300 56 63 chr20 50192082 50193024 -21960858 + HAL1 LINE L1 2 937 -1570 438 70 0 0 chr20 50193027 50193084 -21960798 + U2 snRNA snRNA 4 60 -128 4404 205 11 10 chr20 50193103 50194061 -21959821 + L1PA14 LINE L1 2064 3022 -3124 2690 123 3 8 chr20 50194063 50194438 -21959444 + THE1C LTR MaLR 3 375 0 10148 127 37 0 chr20 50194438 50195915 -21957967 + THE1C-int LTR MaLR 1 1532 -48 1202 123 6 6 chr20 50195915 50196086 -21957796 + AluSx SINE Alu 1 171 -141 5844 216 44 33 chr20 50196086 50197166 -21956716 + L1MC3 LINE L1 3145 4211 -1955 5937 108 45 6 chr20 50197166 50198985 -21954897 + L1PA14 LINE L1 4294 6161 0 5844 216 44 33 chr20 50198985 50199290 -21954592 + L1MC3 LINE L1 4211 4511 -1655 1359 204 53 7 chr20 50199290 50199574 -21954308 + AluJb SINE Alu 1 297 -15 5844 216 44 33 chr20 50199574 50199758 -21954124 + L1MC3 LINE L1 4511 4691 -1475 1206 199 78 35 chr20 50199758 50199882 -21954000 + AluJo SINE Alu 1 118 -194 203 0 0 36 chr20 50199882 50199910 -21953972 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 1206 199 78 35 chr20 50199910 50200067 -21953815 + AluJo SINE Alu 118 294 -18 5844 216 44 33 chr20 50200067 50201085 -21952797 + L1MC3 LINE L1 4691 5745 -421 545 79 45 11 chr20 50201094 50201183 -21952699 + LTR10D LTR ERV1 1 92 -421 391 209 29 65 chr20 50201192 50201331 -21952551 + L1MC3 LINE L1 6028 6161 -1624 * 694 284 141 46 chr20 50201327 50201823 -21952059 + HAL1 LINE L1 1555 2097 -410 384 278 61 28 chr20 50201880 50202092 -21951790 + HAL1 LINE L1 2260 2478 -29 338 229 59 34 chr20 50202124 50202242 -21951640 + L1ME4a LINE L1 5964 6084 -37 246 299 128 8 chr20 50203100 50203217 -21950665 + MIR SINE MIR 22 152 -110 718 260 73 10 chr20 50203271 50203475 -21950407 - MIR SINE MIR -14 248 32 189 379 19 0 chr20 50203554 50203657 -21950225 - MIR SINE MIR -59 149 45 248 283 0 0 chr20 50204114 50204174 -21949708 + L2 LINE L2 3214 3273 -40 2050 119 31 0 chr20 50204494 50204787 -21949095 - AluSq SINE Alu -11 302 1 407 334 87 31 chr20 50205221 50205762 -21948120 + L1ME LINE L1 2128 2693 -3453 305 259 84 28 chr20 50205889 50206032 -21947850 + L1ME LINE L1 3820 3970 -2176 1083 219 82 8 chr20 50206267 50206523 -21947359 + MER63B DNA MER1_type 1 275 -161 395 253 126 25 chr20 50207164 50207411 -21946471 + L1ME LINE L1 5327 5605 -516 396 299 68 60 chr20 50207590 50207941 -21945941 - L1M4 LINE L1 -1374 4772 4419 26079 147 13 20 chr20 50208076 50212675 -21941207 - L1PA8A LINE L1 -579 5867 1237 225 65 0 0 chr20 50212675 50212706 -21941176 + (TTG)n Simple_repeat Simple_repeat 3 33 0 26079 147 13 20 chr20 50212706 50213350 -21940532 - L1PA8A LINE L1 -5209 1237 590 335 274 65 13 chr20 50213753 50213906 -21939976 - HAL1 LINE L1 -106 2401 2241 1746 117 55 120 chr20 50214186 50214587 -21939295 - THE1C LTR MaLR 0 375 1 359 291 170 6 chr20 50215096 50215278 -21938604 - HAL1 LINE L1 -795 1712 1501 424 173 39 0 chr20 50217555 50217659 -21936223 + GA-rich Low_complexity Low_complexity 3 110 0 483 259 104 16 chr20 50218169 50218362 -21935520 - MIR SINE MIR 0 262 53 508 207 27 0 chr20 50218442 50218553 -21935329 - L1M4 LINE L1 -597 5581 5468 1222 193 23 0 chr20 50218553 50218812 -21935070 + L1MB4 LINE L1 5912 6176 -4 2447 255 59 58 chr20 50218816 50219896 -21933986 + HAL1b LINE L1 260 1340 -8 269 257 37 18 chr20 50219926 50220035 -21933847 + L1ME4a LINE L1 5963 6073 -48 22 0 0 0 chr20 50220041 50220063 -21933819 + AT_rich Low_complexity Low_complexity 1 22 0 198 0 0 0 chr20 50220706 50220728 -21933154 + (TTTTA)n Simple_repeat Simple_repeat 2 23 0 1878 132 0 28 chr20 50220734 50221022 -21932860 - AluSx SINE Alu -32 280 1 1098 243 151 16 chr20 50221098 50221543 -21932339 + MLT1D LTR MaLR 1 505 0 229 330 60 0 chr20 50222576 50222676 -21931206 + L2 LINE L2 2928 3033 -239 832 266 99 27 chr20 50222723 50223125 -21930757 - LTR16A LTR ERVL -8 442 12 204 125 0 0 chr20 50223253 50223285 -21930597 + (TGAA)n Simple_repeat Simple_repeat 2 33 0 690 234 25 90 chr20 50224196 50224245 -21929637 - MIR SINE MIR 0 262 211 825 216 50 41 chr20 50224245 50224463 -21929419 + MER58A DNA MER1_type 1 220 -4 690 234 25 90 chr20 50224463 50224530 -21929352 - MIR SINE MIR -51 211 141 2288 115 0 0 chr20 50224530 50224826 -21929056 - AluSc SINE Alu -13 296 1 690 234 25 90 chr20 50224826 50224986 -21928896 - MIR SINE MIR -121 141 3 394 198 25 0 chr20 50225489 50225570 -21928312 + L2 LINE L2 3226 3308 -5 2592 149 42 20 chr20 50226010 50226460 -21927422 + MLT1C LTR MaLR 1 460 -7 2295 118 0 6 chr20 50227172 50227486 -21926396 + AluSx SINE Alu 1 312 0 613 238 93 0 chr20 50227652 50227824 -21926058 - MER5A DNA MER1_type -1 188 1 792 237 19 42 chr20 50228040 50228255 -21925627 - MIR SINE MIR -34 228 19 186 286 48 16 chr20 50228307 50228370 -21925512 + MIR SINE MIR 84 148 -114 890 188 112 0 chr20 50228801 50228971 -21924911 + MER5A DNA MER1_type 1 189 0 421 279 19 44 chr20 50228994 50229152 -21924730 + MIR3 SINE MIR 33 186 -22 257 391 14 7 chr20 50229176 50229314 -21924568 + L2 LINE L2 2905 3043 -229 242 229 167 31 chr20 50229406 50229502 -21924380 + L2 LINE L2 3192 3300 -13 24 0 0 0 chr20 50229928 50229952 -21923930 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr20 50230455 50230477 -21923405 + AT_rich Low_complexity Low_complexity 1 22 0 385 173 53 0 chr20 50230779 50230854 -21923028 + MIR SINE MIR 43 121 -141 452 234 6 0 chr20 50231007 50231174 -21922708 + (CA)n Simple_repeat Simple_repeat 2 169 0 409 240 11 0 chr20 50231203 50231378 -21922504 + (CA)n Simple_repeat Simple_repeat 1 177 0 572 214 6 0 chr20 50231427 50231605 -21922277 + (CA)n Simple_repeat Simple_repeat 1 179 0 307 323 148 8 chr20 50232091 50232348 -21921534 - L2 LINE L2 -993 2321 2029 221 21 42 42 chr20 50232739 50232787 -21921095 + (TAA)n Simple_repeat Simple_repeat 3 50 0 191 62 94 16 chr20 50232820 50232884 -21920998 + (TA)n Simple_repeat Simple_repeat 2 70 0 199 146 45 22 chr20 50232921 50233010 -21920872 + (TATAA)n Simple_repeat Simple_repeat 5 95 0 286 241 54 27 chr20 50233237 50233349 -21920533 - L3 LINE CR1 -91 1486 1372 189 0 0 0 chr20 50233657 50233678 -21920204 + (TA)n Simple_repeat Simple_repeat 1 21 0 287 331 32 0 chr20 50233960 50234084 -21919798 + MIR SINE MIR 80 207 -55 1848 193 11 30 chr20 50234812 50235180 -21918702 - MLT1A1 LTR MaLR -4 361 1 202 200 0 0 chr20 50235298 50235333 -21918549 + (CA)n Simple_repeat Simple_repeat 2 36 0 2427 161 99 13 chr20 50236312 50236777 -21917105 + MLT1D LTR MaLR 1 505 0 1937 102 31 71 chr20 50237416 50237547 -21916335 + AluSx SINE Alu 1 136 -176 2458 74 3 7 chr20 50237547 50237856 -21916026 + AluY SINE Alu 1 308 -3 1937 102 31 71 chr20 50237856 50238048 -21915834 + AluSx SINE Alu 136 311 -1 21 0 0 0 chr20 50238048 50238069 -21915813 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr20 50238250 50238273 -21915609 + AT_rich Low_complexity Low_complexity 1 23 0 544 192 147 32 chr20 50238526 50238682 -21915200 - MER58C DNA MER1_type -3 212 39 381 293 9 9 chr20 50239015 50239131 -21914751 - MIR SINE MIR -146 116 1 429 275 176 47 chr20 50240272 50240676 -21913206 + L1ME4a LINE L1 5645 6100 -21 27 29 0 0 chr20 50240689 50240723 -21913159 + AT_rich Low_complexity Low_complexity 1 34 0 1837 170 10 0 chr20 50241607 50241896 -21911986 - AluJo SINE Alu -18 294 3 1138 202 128 48 chr20 50242257 50242593 -21911289 + MLT1B LTR MaLR 11 373 -17 195 214 0 0 chr20 50242840 50242882 -21911000 + L2 LINE L2 3270 3311 -2 343 215 204 0 chr20 50243717 50243810 -21910072 - MER81 DNA DNA -2 112 1 196 292 0 52 chr20 50244274 50244370 -21909512 + L2 LINE L2 2890 2980 -333 195 316 0 0 chr20 50244582 50244639 -21909243 + L2 LINE L2 3242 3298 -15 1836 249 34 69 chr20 50245477 50245905 -21907977 - MLT1E LTR MaLR -2 591 149 2023 128 7 33 chr20 50245905 50246211 -21907671 + AluSx SINE Alu 1 298 -14 1836 249 34 69 chr20 50246211 50246266 -21907616 - MLT1E LTR MaLR -444 149 94 1803 161 52 3 chr20 50246266 50246557 -21907325 - AluJo SINE Alu -7 305 1 1836 249 34 69 chr20 50246557 50246663 -21907219 - MLT1E LTR MaLR -499 94 22 196 222 0 56 chr20 50246758 50246812 -21907070 - L2 LINE L2 0 3272 3222 303 93 0 0 chr20 50246816 50246859 -21907023 + (CAGTC)n Simple_repeat Simple_repeat 3 45 0 1910 139 8 0 chr20 50246879 50247146 -21906736 - AluSp SINE Alu -25 288 20 1168 282 133 35 chr20 50247147 50248049 -21905833 - L2 LINE L2 -42 3271 2310 198 274 0 0 chr20 50248305 50248356 -21905526 - MIR SINE MIR -6 256 206 504 303 45 23 chr20 50248556 50248777 -21905105 - L3 LINE CR1 -108 1469 1244 213 233 35 81 chr20 50248973 50249059 -21904823 - MIR SINE MIR -96 166 85 842 184 148 131 chr20 50249073 50249492 -21904390 - LTR37A LTR ERV1 0 426 1 204 297 88 0 chr20 50250582 50250673 -21903209 + L2 LINE L2 3162 3260 -12 350 252 43 111 chr20 50250708 50250942 -21902940 - L2 LINE L2 -1 3312 3095 352 323 16 37 chr20 50251105 50251294 -21902588 - MIR SINE MIR 0 262 78 2272 99 0 7 chr20 50251917 50252232 -21901650 + AluSg SINE Alu 1 313 0 329 280 84 35 chr20 50252360 50252503 -21901379 + MIR SINE MIR 107 256 -6 252 361 41 10 chr20 50253643 50253740 -21900142 + L2 LINE L2 3134 3233 -39 529 330 40 9 chr20 50253771 50253998 -21899884 + MIR SINE MIR 29 262 0 1859 151 3 17 chr20 50254849 50255141 -21898741 + AluJo SINE Alu 1 288 -24 240 111 0 0 chr20 50255144 50255180 -21898702 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 619 322 103 25 chr20 50255430 50256076 -21897806 + L2 LINE L2 2616 3313 0 313 132 58 33 chr20 50256164 50256285 -21897597 + (TA)n Simple_repeat Simple_repeat 1 124 0 225 65 0 0 chr20 50256304 50256335 -21897547 + (TATG)n Simple_repeat Simple_repeat 2 32 0 410 184 13 0 chr20 50256361 50256437 -21897445 - MIR SINE MIR -119 143 67 1826 157 17 34 chr20 50256835 50257185 -21896697 - L1MB5 LINE L1 -10 6164 5821 1025 152 41 35 chr20 50257901 50258098 -21895784 - MER20 DNA MER1_type 0 219 22 361 268 49 53 chr20 50258749 50258992 -21894890 + L2 LINE L2 1706 1947 -1367 * 582 180 9 9 chr20 50258983 50259094 -21894788 + L2 LINE L2 3184 3294 -19 231 36 0 0 chr20 50259102 50259130 -21894752 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 290 278 98 35 chr20 50259134 50259389 -21894493 + L2 LINE L2 1949 2219 -1095 861 301 66 49 chr20 50259490 50259916 -21893966 + MLT1K LTR MaLR 137 569 -19 241 301 24 0 chr20 50259932 50260015 -21893867 + L2 LINE L2 2226 2310 -1004 961 248 87 112 chr20 50260310 50260862 -21893020 + MLT1G LTR MaLR 53 590 0 188 301 32 65 chr20 50260988 50261081 -21892801 + L2 LINE L2 3182 3271 -1 188 167 21 0 chr20 50262204 50262252 -21891630 + (TGGA)n Simple_repeat Simple_repeat 3 51 0 518 227 22 0 chr20 50262302 50262540 -21891342 + (TGGA)n Simple_repeat Simple_repeat 1 243 0 327 292 50 17 chr20 50262597 50262717 -21891165 - L2 LINE L2 0 3313 3190 355 308 9 0 chr20 50262732 50262839 -21891043 - L2 LINE L2 -642 2672 2565 455 238 205 7 chr20 50262905 50263056 -21890826 + MIR SINE MIR 47 227 -35 723 262 49 13 chr20 50263547 50263772 -21890110 + MIR SINE MIR 20 252 -10 381 176 44 22 chr20 50264430 50264521 -21889361 - MIR SINE MIR -133 129 37 918 223 63 0 chr20 50264884 50265090 -21888792 - MER20 DNA MER1_type 0 219 1 259 264 6 18 chr20 50265962 50266131 -21887751 + GA-rich Low_complexity Low_complexity 1 167 0 276 240 13 13 chr20 50266157 50266232 -21887650 - MER103 DNA DNA -4 162 88 455 223 18 18 chr20 50266253 50266365 -21887517 - MIR SINE MIR -1 261 150 229 348 43 43 chr20 50266651 50266812 -21887070 - MIR SINE MIR -5 257 97 450 13 0 77 chr20 50266915 50266993 -21886889 + (GGGA)n Simple_repeat Simple_repeat 3 74 0 2537 140 16 32 chr20 50267303 50267738 -21886144 + MSTA LTR MaLR 1 428 0 340 287 37 52 chr20 50268058 50268194 -21885688 + MER5A DNA MER1_type 54 187 -2 558 186 23 17 chr20 50269297 50269474 -21884408 + GA-rich Low_complexity Low_complexity 1 178 0 652 148 17 28 chr20 50269515 50269691 -21884191 + GA-rich Low_complexity Low_complexity 1 174 0 198 224 0 0 chr20 50269680 50269729 -21884153 + G-rich Low_complexity Low_complexity 5 53 0 * 199 281 67 0 chr20 50269783 50269872 -21884010 - MIR3 SINE MIR -49 159 65 466 228 89 16 chr20 50269921 50270044 -21883838 + MER94 DNA DNA 1 132 -2 671 246 200 0 chr20 50270344 50270539 -21883343 + MIR SINE MIR 7 240 -22 21 0 0 0 chr20 50270554 50270575 -21883307 + AT_rich Low_complexity Low_complexity 1 21 0 613 65 0 0 chr20 50370654 50370731 -21783151 - Alu SINE Alu -232 78 2 1184 156 5 15 chr20 50370732 50370931 -21782951 - MSTA LTR MaLR -230 198 2 268 178 0 0 chr20 50370933 50370978 -21782904 - FRAM/FAM SINE Alu -121 45 1 1217 281 83 11 chr20 50370987 50371725 -21782157 + L2 LINE L2 2527 3312 -1 2014 133 0 0 chr20 50371748 50372042 -21781840 + AluSx SINE Alu 1 294 -18 196 289 84 24 chr20 50373088 50373171 -21780711 - L2 LINE L2 -1546 1768 1681 1687 139 3 78 chr20 50373172 50373504 -21780378 + AluJb SINE Alu 1 307 -5 524 232 145 54 chr20 50373588 50373801 -21780081 - HAL1b LINE L1 -124 1224 979 2214 112 0 0 chr20 50373801 50374106 -21779776 - AluSq SINE Alu -8 305 1 524 232 145 54 chr20 50374106 50374168 -21779714 - HAL1b LINE L1 -369 979 924 2408 116 27 46 chr20 50374336 50374707 -21779175 - THE1B LTR MaLR 0 364 1 512 248 64 0 chr20 50374790 50374931 -21778951 - L1ME1 LINE L1 -105 6061 5912 725 101 13 138 chr20 50374938 50374988 -21778894 - THE1C LTR MaLR 0 375 320 2111 92 0 0 chr20 50374988 50375261 -21778621 + AluSg SINE Alu 20 292 -18 725 101 13 138 chr20 50375261 50375369 -21778513 - THE1C LTR MaLR -55 320 237 634 280 114 53 chr20 50375377 50375773 -21778109 - HAL1 LINE L1 -1946 561 142 2082 120 3 0 chr20 50375778 50376077 -21777805 - AluSx SINE Alu -12 300 1 910 173 0 19 chr20 50376755 50376917 -21776965 + FRAM SINE Alu 1 158 -18 1985 122 3 0 chr20 50376925 50377220 -21776662 + AluSx SINE Alu 4 299 -13 2224 108 0 0 chr20 50377583 50377888 -21775994 + AluSq SINE Alu 1 305 -8 586 211 81 19 chr20 50378357 50378518 -21775364 - LTR37A LTR ERV1 -58 368 198 1200 189 126 15 chr20 50378975 50379245 -21774637 - AluJo SINE Alu -2 300 1 1783 130 0 11 chr20 50379871 50380147 -21773735 - AluSc SINE Alu -36 273 1 1759 163 0 0 chr20 50380147 50380429 -21773453 - AluSx SINE Alu -9 303 21 193 230 299 0 chr20 50380459 50380546 -21773336 + MIR SINE MIR 150 262 0 572 250 18 6 chr20 50380554 50380718 -21773164 + L1ME3A LINE L1 5817 5982 -188 1094 120 11 21 chr20 50380788 50380979 -21772903 + L1MA6 LINE L1 6112 6300 0 1512 184 7 10 chr20 50380988 50381282 -21772600 + AluJo SINE Alu 7 299 -13 547 185 84 8 chr20 50381382 50381501 -21772381 + L1ME3A LINE L1 6042 6169 -1 2127 103 3 3 chr20 50381504 50381804 -21772078 + AluSx SINE Alu 1 300 -12 501 222 86 0 chr20 50381944 50382061 -21771821 - L2 LINE L2 -5 3308 3182 212 234 0 0 chr20 50383197 50383244 -21770638 + L2 LINE L2 3263 3309 -4 299 340 10 0 chr20 50383259 50383362 -21770520 - MIR SINE MIR -99 163 60 234 267 81 0 chr20 50383640 50383726 -21770156 + L2 LINE L2 3174 3266 -6 230 287 23 0 chr20 50384134 50384221 -21769661 + (TG)n Simple_repeat Simple_repeat 1 89 0 489 268 63 58 chr20 50384484 50384674 -21769208 - MIR3 SINE MIR -8 200 10 404 67 17 0 chr20 50385700 50385760 -21768122 + (GGGA)n Simple_repeat Simple_repeat 4 64 0 495 143 0 0 chr20 50385821 50385891 -21767991 + AluJb SINE Alu 150 219 -93 211 162 0 27 chr20 50385915 50385952 -21767930 + MIR SINE MIR 109 144 -64 388 304 9 9 chr20 50385952 50386064 -21767818 - MIR SINE MIR -60 148 37 585 275 180 5 chr20 50386170 50386392 -21767490 + MIR SINE MIR 2 262 0 1863 153 3 10 chr20 50386437 50386738 -21767144 - AluJo SINE Alu -13 299 1 551 169 8 0 chr20 50387015 50387139 -21766743 + CT-rich Low_complexity Low_complexity 1 125 0 786 223 19 0 chr20 50387159 50387316 -21766566 - MER63A DNA MER1_type -4 206 47 356 326 31 16 chr20 50387442 50387571 -21766311 - L2 LINE L2 -3 3310 3180 348 256 0 0 chr20 50387626 50387704 -21766178 - MIR SINE MIR -108 154 77 303 225 0 0 chr20 50388185 50388256 -21765626 + (CA)n Simple_repeat Simple_repeat 2 72 0 735 251 175 50 chr20 50388832 50389210 -21764672 - LTR16A1 LTR ERVL 0 457 33 1286 158 228 39 chr20 50389211 50389571 -21764311 + MSTC LTR MaLR 1 428 0 477 221 186 21 chr20 50389841 50389986 -21763896 + MER5A DNA MER1_type 14 182 -7 483 284 142 45 chr20 50390096 50390457 -21763425 - L2 LINE L2 -1 3312 2878 2079 122 3 0 chr20 50390457 50390760 -21763122 + AluSx SINE Alu 1 304 -8 483 284 142 45 chr20 50390760 50390898 -21762984 - L2 LINE L2 -435 2878 2755 774 253 6 0 chr20 50390941 50391107 -21762775 + MIR SINE MIR 65 231 -31 1766 75 55 4 chr20 50391133 50391387 -21762495 - AluY SINE Alu -13 298 32 740 274 155 68 chr20 50391388 50391892 -21761990 - L2 LINE L2 -571 2743 2196 1870 132 7 0 chr20 50391895 50392212 -21761670 + AluJb SINE Alu 1 319 0 634 288 62 25 chr20 50392235 50392461 -21761421 + MIR SINE MIR 18 241 -21 370 280 19 9 chr20 50392679 50392786 -21761096 + MIR SINE MIR 39 146 -62 1975 166 68 46 chr20 50392804 50392870 -21761012 - MLT1C LTR MaLR 0 467 404 2488 54 0 10 chr20 50392870 50393184 -21760698 + AluY SINE Alu 1 311 0 1975 166 68 46 chr20 50393184 50393574 -21760308 - MLT1C LTR MaLR -63 404 1 272 293 38 28 chr20 50393932 50394038 -21759844 + ERVL LTR ERVL 2546 2652 -3002 3848 149 34 30 chr20 50394176 50394880 -21759002 + L1MC2 LINE L1 5627 6333 -11 180 97 0 0 chr20 50394881 50394912 -21758970 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 870 221 54 80 chr20 50395220 50395645 -21758237 + MER96B DNA MER1_type 4 417 0 214 250 71 0 chr20 50395672 50395728 -21758154 - L2 LINE L2 0 3313 3254 490 305 105 13 chr20 50395830 50396069 -21757813 + ERVL LTR ERVL 4220 4480 -1284 641 262 116 18 chr20 50396099 50396324 -21757558 + ERVL LTR ERVL 4538 4784 -980 439 213 65 28 chr20 50396646 50396754 -21757128 - MER91C DNA MER1_type -6 134 23 990 237 48 0 chr20 50396846 50397074 -21756808 - MIR SINE MIR 0 262 24 189 323 31 0 chr20 50397314 50397379 -21756503 - MIR SINE MIR -16 246 180 2282 121 30 19 chr20 50397454 50397825 -21756057 + THE1C LTR MaLR 1 375 0 333 315 0 27 chr20 50397967 50398078 -21755804 - MIR SINE MIR -137 125 18 243 156 67 0 chr20 50398154 50398199 -21755683 - L1MC/D LINE L1 -2342 5466 5419 981 190 139 4 chr20 50398228 50398465 -21755417 - AluJb SINE Alu -41 271 3 3813 112 7 0 chr20 50398502 50399040 -21754842 - MER41B LTR ERV1 -86 549 8 2285 88 3 0 chr20 50399058 50399364 -21754518 - AluSp SINE Alu -6 307 1 1410 134 0 0 chr20 50399365 50399566 -21754316 - MER41B-int LTR ERV1 -17 5929 5729 569 157 22 0 chr20 50399562 50399651 -21754231 - MER41B-int LTR ERV1 -5855 91 1 * 924 130 55 0 chr20 50399652 50399772 -21754110 - MER41B LTR ERV1 -1 634 503 2340 94 0 0 chr20 50399772 50400079 -21753803 + AluSc SINE Alu 1 307 -2 924 130 55 0 chr20 50400079 50400104 -21753778 - MER41B LTR ERV1 -132 503 481 302 290 100 78 chr20 50400352 50400493 -21753389 - L1MC/D LINE L1 -1007 5139 4988 1981 119 0 3 chr20 50400493 50400807 -21753075 - AluSx SINE Alu 0 315 3 302 290 100 78 chr20 50400807 50400894 -21752988 - L1MC/D LINE L1 -1158 4988 4904 30 0 0 24 chr20 50400915 50400941 -21752941 + AT_rich Low_complexity Low_complexity 1 27 -13 2157 83 3 0 chr20 50400941 50401229 -21752653 - AluY SINE Alu -22 289 1 30 0 0 24 chr20 50401229 50401243 -21752639 + AT_rich Low_complexity Low_complexity 27 40 0 1996 116 3 0 chr20 50401243 50401527 -21752355 - AluSx SINE Alu -27 285 1 447 317 108 56 chr20 50401531 50401793 -21752089 - L1MC/D LINE L1 -1255 4891 4644 2122 117 7 0 chr20 50401793 50402092 -21751790 - AluSp SINE Alu -12 301 1 2105 92 33 3 chr20 50402092 50402395 -21751487 - AluSq SINE Alu -1 312 1 447 317 108 56 chr20 50402395 50402569 -21751313 - L1MC/D LINE L1 -1502 4644 4426 2102 105 7 3 chr20 50402569 50402865 -21751017 - AluSq SINE Alu -16 297 1 447 317 108 56 chr20 50402865 50402890 -21750992 - L1MC/D LINE L1 -1720 4426 4404 211 111 28 0 chr20 50402903 50402939 -21750943 + (CAAT)n Simple_repeat Simple_repeat 2 38 0 837 206 79 11 chr20 50402943 50403132 -21750750 + MER20 DNA MER1_type 10 211 -8 2136 108 16 3 chr20 50403144 50403450 -21750432 + AluSg SINE Alu 1 310 0 433 203 23 31 chr20 50403769 50403897 -21749985 + L1ME2 LINE L1 5911 6037 -127 1885 118 0 46 chr20 50403993 50404298 -21749584 - AluJo SINE Alu -21 291 1 300 134 37 24 chr20 50404451 50404533 -21749349 - L1MB2 LINE L1 -1 6170 6088 4426 142 34 68 chr20 50404573 50405248 -21748634 - L1MB3 LINE L1 -49 6134 5493 1899 111 74 27 chr20 50405248 50405546 -21748336 - AluSx SINE Alu 0 312 1 4426 142 34 68 chr20 50405546 50405768 -21748114 - L1MB3 LINE L1 -690 5493 5265 363 231 169 53 chr20 50405774 50405824 -21748058 - L1ME4a LINE L1 -277 5844 5801 2077 110 0 10 chr20 50405824 50406123 -21747759 - AluSx SINE Alu -14 298 3 363 231 169 53 chr20 50406123 50406297 -21747585 - L1ME4a LINE L1 -320 5801 5667 670 323 96 22 chr20 50406308 50406828 -21747054 - L1MC/D LINE L1 -1883 4263 3673 1214 185 37 44 chr20 50406870 50407168 -21746714 - L1ME2 LINE L1 -9 6155 5860 969 136 0 19 chr20 50407187 50407342 -21746540 - FAM SINE Alu -11 174 23 1075 149 0 0 chr20 50407439 50407607 -21746275 + FRAM SINE Alu 1 165 -11 887 296 103 62 chr20 50407615 50407954 -21745928 - L1MC/D LINE L1 -2529 3617 3293 1979 142 10 0 chr20 50407954 50408263 -21745619 - AluSx SINE Alu 0 312 1 887 296 103 62 chr20 50408263 50408663 -21745219 - L1MC/D LINE L1 -2853 3293 2848 2192 235 72 43 chr20 50409156 50409929 -21743953 + HAL1 LINE L1 594 1389 -1118 2063 103 23 3 chr20 50410026 50410328 -21743554 - AluSg SINE Alu -2 308 1 479 273 86 0 chr20 50410685 50410824 -21743058 - MIR SINE MIR -71 191 41 311 251 12 110 chr20 50410880 50411043 -21742839 - MLT1J LTR MaLR -257 254 108 213 343 0 0 chr20 50411593 50411663 -21742219 - MIR3 SINE MIR -41 167 98 899 325 101 22 chr20 50411727 50412361 -21741521 - L2 LINE L2 -349 2965 2282 295 314 32 52 chr20 50412376 50412444 -21741438 - L1M4 LINE L1 -1771 4375 4307 1349 195 10 43 chr20 50412444 50412746 -21741136 - AluJo SINE Alu -20 292 1 295 314 32 52 chr20 50412746 50412925 -21740957 - L1M4 LINE L1 -1839 4307 4133 818 103 0 0 chr20 50412977 50413084 -21740798 - U6 snRNA snRNA 0 107 1 1503 160 163 53 chr20 50413231 50413588 -21740294 - MSTD LTR MaLR 0 396 1 230 272 96 56 chr20 50414803 50414928 -21738954 + L2 LINE L2 3133 3262 -10 472 215 19 19 chr20 50416610 50416717 -21737165 + L2 LINE L2 2964 3070 -202 274 265 93 45 chr20 50416738 50417018 -21736864 - L2 LINE L2 0 3272 2922 1672 186 3 0 chr20 50417112 50417423 -21736459 - AluJo SINE Alu 0 312 1 727 244 18 18 chr20 50417590 50417758 -21736124 - MIR SINE MIR -91 171 4 1446 85 3 0 chr20 50418151 50418343 -21735539 + AluSg/x SINE Alu 90 282 -28 439 20 0 0 chr20 50418343 50418394 -21735488 + (TAAAA)n Simple_repeat Simple_repeat 2 115 0 1395 190 34 85 chr20 50418394 50418831 -21735051 - L1ME3 LINE L1 -78 6084 5670 514 328 79 29 chr20 50419000 50419044 -21734838 + L2 LINE L2 2491 2531 -782 2312 67 3 3 chr20 50419044 50419344 -21734538 - AluSg SINE Alu -10 300 1 514 328 79 29 chr20 50419344 50419802 -21734080 + L2 LINE L2 2531 3082 -231 10866 211 38 18 chr20 50419802 50420616 -21733266 - L1MB7 LINE L1 -199 5985 5189 1772 142 7 10 chr20 50420616 50420905 -21732977 - AluSx SINE Alu -24 288 1 10866 211 38 18 chr20 50420905 50422708 -21731174 - L1MB7 LINE L1 -995 5189 3424 1849 151 0 13 chr20 50422708 50423020 -21730862 - AluJb SINE Alu -4 308 1 10866 211 38 18 chr20 50423020 50423459 -21730423 - L1MB7 LINE L1 -2760 3424 2995 769 159 0 0 chr20 50423459 50423585 -21730297 - L1MA4A LINE L1 -5 6298 6173 10866 211 38 18 chr20 50423585 50424009 -21729873 - L1MB7 LINE L1 -3189 2995 2442 1882 142 62 21 chr20 50424009 50424348 -21729534 + MER46B DNA MER2_type 1 228 -8 7577 226 52 32 chr20 50424375 50425029 -21728853 - L1M4c LINE L1 -3873 2952 2313 2088 125 0 3 chr20 50425029 50425332 -21728550 + AluSx SINE Alu 1 302 -10 1565 195 0 3 chr20 50425331 50425613 -21728269 - AluJo SINE Alu -31 281 1 * 7577 226 52 32 chr20 50425613 50426707 -21727175 - L1M4c LINE L1 -4793 2032 1023 207 0 0 0 chr20 50426707 50426730 -21727152 + (TTG)n Simple_repeat Simple_repeat 2 24 0 7577 226 52 32 chr20 50426730 50427762 -21726120 - L1M4c LINE L1 -5802 1023 14 1828 152 0 17 chr20 50427812 50428126 -21725756 - AluSx SINE Alu 0 309 1 1787 207 26 21 chr20 50428149 50428489 -21725393 - MER90 LTR ERV1 0 614 270 1726 207 70 27 chr20 50428489 50428672 -21725210 + MLT1D LTR MaLR 1 175 -330 189 0 0 0 chr20 50428672 50428693 -21725189 + (TC)n Simple_repeat Simple_repeat 1 21 0 1726 207 70 27 chr20 50428693 50428993 -21724889 + MLT1D LTR MaLR 175 505 0 1787 207 26 21 chr20 50428993 50429039 -21724843 - MER90 LTR ERV1 -344 270 226 1716 178 121 14 chr20 50429053 50429418 -21724464 + MLT1C LTR MaLR 2 405 -62 2117 86 0 0 chr20 50429419 50429729 -21724153 - AluSq SINE Alu 0 326 17 1001 193 11 6 chr20 50429734 50429910 -21723972 - MER90 LTR ERV1 -398 177 1 1430 168 13 56 chr20 50429989 50430147 -21723735 - AluJo SINE Alu -21 291 151 2371 75 0 3 chr20 50430147 50430454 -21723428 - AluY SINE Alu -5 306 1 1430 168 13 56 chr20 50430454 50430599 -21723283 - AluJo SINE Alu -161 151 1 1233 211 26 4 chr20 50430775 50431002 -21722880 + MLT1A1 LTR MaLR 1 232 -133 43882 33 21 2 chr20 50431002 50437032 -21716850 + L1PA2 LINE L1 2 6152 -3 865 161 35 0 chr20 50437069 50437212 -21716670 + MLT1A1 LTR MaLR 218 365 0 218 283 0 0 chr20 50437718 50437771 -21716111 - MIR SINE MIR -63 145 93 945 165 30 10 chr20 50437884 50438084 -21715798 - Charlie1b DNA MER1_type -1 522 319 304 113 0 0 chr20 50438161 50438214 -21715668 - L1MB4 LINE L1 -1 6179 6127 595 183 100 0 chr20 50438215 50438335 -21715547 - FLAM_C SINE Alu -6 137 6 3118 183 52 6 chr20 50438340 50438979 -21714903 - L1MB3 LINE L1 -40 6143 5476 1243 175 66 7 chr20 50438979 50439253 -21714629 - Charlie1b DNA MER1_type -162 361 72 2071 99 25 0 chr20 50439263 50439545 -21714337 - AluSx SINE Alu -23 289 1 288 229 72 0 chr20 50439573 50439656 -21714226 - L1MC5 LINE L1 -111 7850 7762 2037 144 3 0 chr20 50439871 50440183 -21713699 - AluSq SINE Alu 0 313 1 647 226 39 22 chr20 50440497 50440678 -21713204 - L3 LINE CR1 -30 1547 1364 215 241 148 19 chr20 50440763 50440871 -21713011 + MIR3 SINE MIR 86 207 -1 294 308 65 19 chr20 50441643 50441750 -21712132 - MIR SINE MIR -149 113 2 671 173 45 15 chr20 50442103 50442236 -21711646 - LTR45 LTR ERV1 0 525 389 3226 142 19 18 chr20 50443000 50443544 -21710338 - L1MB2 LINE L1 -7 6164 5617 2728 86 5 24 chr20 50443544 50443915 -21709967 - THE1B LTR MaLR 0 364 1 3226 142 19 18 chr20 50443915 50443941 -21709941 - L1MB2 LINE L1 -554 5617 5593 2941 181 49 2 chr20 50444152 50444683 -21709199 + MER68 LTR ERV1 7 562 0 221 290 105 35 chr20 50444695 50444895 -21708987 - L2 LINE L2 -220 3052 2839 354 223 43 11 chr20 50445292 50445386 -21708496 + MIR SINE MIR 109 205 -57 2508 105 28 19 chr20 50445534 50445895 -21707987 - THE1B LTR MaLR 0 364 1 295 161 113 16 chr20 50446467 50446529 -21707353 + MIR SINE MIR 84 151 -111 186 308 0 0 chr20 50446772 50446824 -21707058 + MIR SINE MIR 73 124 -84 553 293 122 9 chr20 50446970 50447199 -21706683 + MIR SINE MIR 8 262 0 1511 219 119 21 chr20 50447222 50447601 -21706281 + MLT1G1 LTR MaLR 3 418 -177 1748 176 7 3 chr20 50447710 50448006 -21705876 + AluJb SINE Alu 1 297 -15 328 278 62 35 chr20 50448242 50448386 -21705496 + MIR3 SINE MIR 30 177 -31 317 317 30 10 chr20 50449341 50449485 -21704397 + MIR SINE MIR 104 250 -12 718 242 145 26 chr20 50449696 50449923 -21703959 + MIR SINE MIR 9 262 0 309 238 139 20 chr20 50450093 50450232 -21703650 - MIR SINE MIR -69 139 7 328 294 0 11 chr20 50450239 50450331 -21703551 - L2 LINE L2 -23 3249 3159 456 315 174 30 chr20 50450535 50450973 -21702909 + L3 LINE CR1 987 1487 -90 783 248 103 62 chr20 50451013 50451400 -21702482 + L2 LINE L2 2911 3313 0 422 234 8 0 chr20 50451400 50451528 -21702354 + (TGGA)n Simple_repeat Simple_repeat 2 130 0 393 246 61 9 chr20 50451901 50452015 -21701867 + MER5A DNA MER1_type 7 126 -63 247 250 36 12 chr20 50451947 50452031 -21701851 - MER5A DNA MER1_type -45 144 59 * 1988 133 0 37 chr20 50452102 50452425 -21701457 + AluSx SINE Alu 1 311 -1 368 279 19 0 chr20 50452426 50452530 -21701352 - MIR SINE MIR -73 135 30 304 272 72 24 chr20 50452878 50453003 -21700879 - MIR SINE MIR -20 242 112 1588 168 0 31 chr20 50453119 50453444 -21700438 - AluJo SINE Alu 0 316 1 536 139 0 0 chr20 50453718 50453797 -21700085 - L2 LINE L2 0 3313 3235 2562 112 67 17 chr20 50453842 50454260 -21699622 - Tigger2 DNA MER2_type -2 2716 2278 403 188 0 0 chr20 50454255 50454324 -21699558 - Tigger2 DNA MER2_type -2649 69 1 * 209 234 47 47 chr20 50454385 50454513 -21699369 - L2 LINE L2 -247 3066 2939 217 305 17 0 chr20 50454958 50455017 -21698865 - MIR SINE MIR -61 147 88 208 77 0 51 chr20 50455325 50455364 -21698518 + (GGGTG)n Simple_repeat Simple_repeat 3 39 0 182 226 60 71 chr20 50455547 50455631 -21698251 + MIR SINE MIR 31 113 -95 805 251 20 0 chr20 50456646 50456841 -21697041 + MIR SINE MIR 64 262 0 649 279 111 24 chr20 50456872 50457444 -21696438 - L2 LINE L2 -217 3055 2415 181 188 0 0 chr20 50457470 50457502 -21696380 + MIR SINE MIR 106 137 -71 189 312 75 32 chr20 50457665 50457758 -21696124 + MIR SINE MIR 110 206 -56 1789 132 56 0 chr20 50457840 50458009 -21695873 - AluSx SINE Alu -9 303 110 192 40 0 0 chr20 50458009 50458034 -21695848 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 1789 132 56 0 chr20 50458034 50458151 -21695731 - AluSx SINE Alu -202 110 1 926 151 74 128 chr20 50458333 50458670 -21695212 - MER33 DNA MER1_type -4 320 2 365 187 13 0 chr20 50458671 50458746 -21695136 - MIR3 SINE MIR -39 169 94 691 258 45 25 chr20 50459524 50459722 -21694160 - MIR SINE MIR -31 231 30 1054 251 332 27 chr20 50460017 50461099 -21692783 - L2 LINE L2 -4 3309 1889 1469 227 113 34 chr20 50461153 50461620 -21692262 + MLT1D LTR MaLR 1 504 -1 1211 249 98 46 chr20 50461847 50462308 -21691574 + L2 LINE L2 2829 3313 0 261 0 0 0 chr20 50462339 50462368 -21691514 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1199 147 0 0 chr20 50462368 50462541 -21691341 + AluSg/x SINE Alu 129 304 -8 307 234 0 64 chr20 50462541 50462635 -21691247 - L2 LINE L2 -1234 2080 1993 270 350 62 45 chr20 50463542 50463851 -21690031 - L1MC/D LINE L1 -1915 5893 5580 2302 66 0 17 chr20 50464004 50464305 -21689577 - AluY SINE Alu -15 296 1 942 123 0 0 chr20 50464309 50464439 -21689443 - FLAM_C SINE Alu -2 131 2 292 233 17 0 chr20 50464657 50464717 -21689165 - MIR SINE MIR -63 145 85 209 297 55 69 chr20 50464784 50464929 -21688953 + MIR3 SINE MIR 18 160 -48 2153 123 0 7 chr20 50465150 50465459 -21688423 - AluSx SINE Alu -5 307 1 2216 103 0 0 chr20 50465492 50465794 -21688088 - AluSx SINE Alu -10 302 1 1811 206 19 12 chr20 50465927 50466345 -21687537 - Charlie4a DNA MER1_type -51 457 37 226 150 190 40 chr20 50466816 50466916 -21686966 - L1ME4a LINE L1 -10 6111 5997 2142 93 40 0 chr20 50467029 50467329 -21686553 - AluSx SINE Alu 0 312 1 206 322 98 46 chr20 50467336 50467510 -21686372 + L2 LINE L2 3129 3311 -2 2781 237 73 99 chr20 50467978 50468458 -21685424 - L1MC4 LINE L1 -4 8038 7547 2799 10 0 0 chr20 50468458 50468771 -21685111 - AluYb8 SINE Alu -5 313 1 2781 237 73 99 chr20 50468771 50469000 -21684882 - L1MC4 LINE L1 -495 7547 7314 2030 99 7 3 chr20 50469000 50469311 -21684571 - AluSq SINE Alu 0 312 1 2781 237 73 99 chr20 50469311 50469643 -21684239 - L1MC4 LINE L1 -728 7314 6975 323 137 0 0 chr20 50469643 50469694 -21684188 + Alu SINE Alu 249 299 -3 1684 174 3 7 chr20 50469695 50469982 -21683900 + AluJb SINE Alu 3 288 -24 2781 237 73 99 chr20 50469982 50470346 -21683536 - L1MC4 LINE L1 -1067 6975 6608 210 71 0 0 chr20 50470346 50470374 -21683508 + (CA)n Simple_repeat Simple_repeat 2 29 0 2781 237 73 99 chr20 50470374 50470519 -21683363 - L1MC4 LINE L1 -1434 6608 6461 245 257 124 55 chr20 50470778 50470828 -21683054 - L1MC4 LINE L1 -2339 5469 5424 2093 141 0 0 chr20 50470828 50471125 -21682757 - AluSx SINE Alu -15 297 1 245 257 124 55 chr20 50471125 50471276 -21682606 - L1MC4 LINE L1 -2384 5424 5254 2069 143 0 0 chr20 50471533 50471826 -21682056 - AluSx SINE Alu -19 293 1 343 304 57 52 chr20 50471877 50472337 -21681545 - L1MC4 LINE L1 -1278 4868 4407 189 0 0 0 chr20 50472342 50472363 -21681519 + (T)n Simple_repeat Simple_repeat 1 21 0 573 294 15 2 chr20 50472452 50472655 -21681227 + MIR SINE MIR 12 262 0 23 0 0 0 chr20 50472811 50472834 -21681048 + AT_rich Low_complexity Low_complexity 1 23 0 887 167 0 0 chr20 50472863 50472995 -21680887 - FLAM_C SINE Alu -1 132 1 385 338 5 23 chr20 50473187 50473406 -21680476 - L1MC4 LINE L1 -2193 3953 3739 498 177 22 88 chr20 50473529 50473684 -21680198 - L1MC3 LINE L1 -3 6163 6017 329 236 14 21 chr20 50473698 50473972 -21679910 + GA-rich Low_complexity Low_complexity 1 272 0 288 278 127 49 chr20 50474387 50474819 -21679063 - L1MC4 LINE L1 -3379 2767 2302 323 229 11 158 chr20 50475127 50475244 -21678638 - HAL1b LINE L1 -538 810 677 1718 179 0 20 chr20 50475244 50475540 -21678342 - AluJb SINE Alu -22 290 1 323 229 11 158 chr20 50475540 50475641 -21678241 - HAL1b LINE L1 -671 677 641 2322 107 3 0 chr20 50475641 50475950 -21677932 - AluSp SINE Alu -3 310 1 323 229 11 158 chr20 50475950 50476014 -21677868 - HAL1b LINE L1 -707 641 569 * 514 199 57 30 chr20 50476009 50476145 -21677737 + L1MA9 LINE L1 6134 6274 -25 514 298 16 56 chr20 50476210 50476532 -21677350 - HAL1b LINE L1 -835 513 205 2547 53 0 3 chr20 50476912 50477212 -21676670 - AluY SINE Alu -12 299 1 808 208 0 0 chr20 50477220 50477369 -21676513 - MLT1A1 LTR MaLR -215 150 2 220 228 59 30 chr20 50477579 50477680 -21676202 - MIR SINE MIR -26 236 133 26 0 0 0 chr20 50477914 50477940 -21675942 + AT_rich Low_complexity Low_complexity 1 26 0 256 203 116 0 chr20 50478166 50478235 -21675647 + MIR SINE MIR 78 154 -108 287 247 41 0 chr20 50478324 50478397 -21675485 + MIR SINE MIR 65 140 -68 2400 89 0 0 chr20 50478422 50478725 -21675157 - AluSx SINE Alu -9 303 1 645 14 0 0 chr20 50479165 50479239 -21674643 + (TTCC)n Simple_repeat Simple_repeat 4 77 0 1513 184 31 0 chr20 50479239 50479500 -21674382 - AluJo SINE Alu -40 272 4 2330 59 42 3 chr20 50479697 50479985 -21673897 - AluY SINE Alu -12 299 1 274 277 36 12 chr20 50480161 50480244 -21673638 + MIR SINE MIR 48 132 -76 384 258 242 26 chr20 50480316 50480506 -21673376 + MIR SINE MIR 24 254 -8 560 220 0 63 chr20 50481091 50481144 -21672738 - L1ME1 LINE L1 -1 6333 6278 1947 133 10 10 chr20 50481144 50481277 -21672605 + AluSx SINE Alu 1 133 -179 378 0 0 0 chr20 50481277 50481319 -21672563 + (TAA)n Simple_repeat Simple_repeat 2 43 0 1947 133 10 10 chr20 50481319 50481486 -21672396 + AluSx SINE Alu 132 301 -11 560 220 0 63 chr20 50481486 50481593 -21672289 - L1ME1 LINE L1 -56 6278 6032 773 288 106 18 chr20 50481988 50482791 -21671091 - L1ME1 LINE L1 -257 5907 5035 352 221 142 39 chr20 50482800 50482927 -21670955 - MIR SINE MIR -110 152 13 374 303 141 7 chr20 50483370 50483512 -21670370 - MIR SINE MIR -79 183 23 2272 91 0 0 chr20 50483691 50484022 -21669860 - AluSp SINE Alu 0 331 1 340 267 33 0 chr20 50484216 50484306 -21669576 + MIR SINE MIR 100 192 -70 788 282 11 7 chr20 50484396 50484621 -21669261 + MIR SINE MIR 1 221 -41 1144 162 134 97 chr20 50484624 50484730 -21669152 + MLT1B LTR MaLR 3 104 -407 2323 131 40 0 chr20 50484730 50485080 -21668802 + THE1B LTR MaLR 1 364 0 1144 162 134 97 chr20 50485080 50485413 -21668469 + MLT1B LTR MaLR 104 509 -2 31 26 0 0 chr20 50485432 50485470 -21668412 + AT_rich Low_complexity Low_complexity 1 38 0 486 217 78 0 chr20 50485849 50485978 -21667904 - L2 LINE L2 -1849 1465 1327 636 199 15 0 chr20 50485992 50486123 -21667759 - LTR16C LTR ERVL 0 491 359 601 172 0 0 chr20 50486499 50486592 -21667290 - AluSx SINE Alu -156 156 64 962 262 143 35 chr20 50486743 50487227 -21666655 - L1ME4a LINE L1 -13 6108 5573 286 319 83 0 chr20 50487289 50487433 -21666449 - L1MC/D LINE L1 -2109 5699 5544 41898 61 7 3 chr20 50487660 50493811 -21660071 - L1PA5 LINE L1 0 6154 11 429 316 114 55 chr20 50493815 50494243 -21659639 - L1MC/D LINE L1 -1823 4323 3847 2176 109 0 0 chr20 50494243 50494527 -21659355 + AluSx SINE Alu 14 297 -15 429 316 114 55 chr20 50494527 50494711 -21659171 - L1MC/D LINE L1 -2299 3847 3675 259 254 107 71 chr20 50495577 50495801 -21658081 - HAL1b LINE L1 -731 617 386 2218 125 0 3 chr20 50495925 50496238 -21657644 - AluSx SINE Alu 0 312 1 449 249 84 52 chr20 50496955 50497168 -21656714 + L1MC/D LINE L1 5304 5523 -2285 300 234 16 16 chr20 50497736 50497800 -21656082 - MER5B DNA MER1_type 0 178 115 329 279 22 55 chr20 50497858 50498041 -21655841 + L1MC4 LINE L1 7865 8041 -1 327 313 78 0 chr20 50498054 50498169 -21655713 - MER5B DNA MER1_type -52 126 3 667 333 65 60 chr20 50498541 50499129 -21654753 + L1MEd LINE L1 682 1365 -1125 1936 156 3 3 chr20 50499129 50499424 -21654458 + AluJb SINE Alu 1 295 -17 667 333 65 60 chr20 50499424 50499544 -21654338 + L1MEd LINE L1 1365 1483 -1007 244 272 93 45 chr20 50499779 50500154 -21653728 + L1MEd LINE L1 2104 2496 -3633 2906 226 45 40 chr20 50500243 50500479 -21653403 - HAL1 LINE L1 -1063 1444 1211 221 0 35 0 chr20 50500479 50500508 -21653374 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 2906 226 45 40 chr20 50500508 50500787 -21653095 - HAL1 LINE L1 -1296 1211 935 1675 197 112 66 chr20 50500787 50501270 -21652612 - MLT1D LTR MaLR 0 505 1 2906 226 45 40 chr20 50501270 50501620 -21652262 - HAL1 LINE L1 -1572 935 574 1084 272 91 26 chr20 50501716 50502102 -21651780 - HAL1 LINE L1 -2095 412 2 354 118 0 0 chr20 50502282 50502333 -21651549 + MADE1 DNA Mariner 30 80 0 216 67 0 0 chr20 50502474 50502504 -21651378 + (CA)n Simple_repeat Simple_repeat 1 30 0 27 29 0 0 chr20 50502896 50502930 -21650952 + AT_rich Low_complexity Low_complexity 1 34 0 2216 102 0 3 chr20 50503498 50503791 -21650091 + AluSx SINE Alu 1 292 -20 474 63 16 0 chr20 50503938 50504001 -21649881 + MSTB2 LTR MaLR 394 457 0 573 250 6 76 chr20 50504222 50504394 -21649488 + L2 LINE L2 2194 2353 -961 1578 130 8 16 chr20 50504395 50504648 -21649234 + MSTB2 LTR MaLR 207 457 0 317 279 127 19 chr20 50504649 50504807 -21649075 + L2 LINE L2 2968 3142 -171 395 239 114 36 chr20 50504912 50505079 -21648803 + L2 LINE L2 3133 3312 -1 4282 196 64 42 chr20 50505493 50506329 -21647553 + L1M4 LINE L1 749 1565 -5081 2236 81 24 17 chr20 50506329 50506454 -21647428 + AluY SINE Alu 1 124 -187 216 0 0 0 chr20 50506454 50506478 -21647404 + (CAAAA)n Simple_repeat Simple_repeat 5 28 0 2236 81 24 17 chr20 50506478 50506649 -21647233 + AluY SINE Alu 124 299 -12 4282 196 64 42 chr20 50506649 50507620 -21646262 + L1M4 LINE L1 1565 2649 -3997 5196 142 21 38 chr20 50507631 50507919 -21645963 + L1MB7 LINE L1 5149 5441 -743 2491 74 0 0 chr20 50507919 50508218 -21645664 + AluY SINE Alu 1 299 -12 5196 142 21 38 chr20 50508218 50508236 -21645646 + L1MB7 LINE L1 5441 5458 -726 1114 180 0 17 chr20 50508236 50508414 -21645468 - FAM SINE Alu 0 175 1 5196 142 21 38 chr20 50508414 50509138 -21644744 + L1MB7 LINE L1 5458 6165 -19 367 45 0 0 chr20 50509264 50509308 -21644574 - MLT2B2 LTR ERVL 0 515 472 234 301 14 0 chr20 50509708 50509781 -21644101 + L2 LINE L2 2709 2782 -532 494 269 48 43 chr20 50509934 50510142 -21643740 + MIR SINE MIR 7 215 -47 294 331 14 69 chr20 50510847 50510992 -21642890 + MER5B DNA MER1_type 42 178 0 201 318 182 0 chr20 50511453 50511541 -21642341 + MER5A DNA MER1_type 86 189 0 403 248 76 41 chr20 50511690 50511835 -21642047 + MIR SINE MIR 14 163 -99 1761 154 13 35 chr20 50512095 50512303 -21641579 - AluJb SINE Alu -1 311 111 2803 107 0 0 chr20 50512303 50512658 -21641224 + THE1A LTR MaLR 1 355 0 1761 154 13 35 chr20 50512658 50512767 -21641115 - AluJb SINE Alu -201 111 1 1047 319 40 5 chr20 50512984 50513389 -21640493 + L2 LINE L2 2203 2621 -693 2568 57 0 0 chr20 50513414 50513711 -21640171 - AluSc SINE Alu -12 297 1 2228 107 3 13 chr20 50513711 50514019 -21639863 - AluSx SINE Alu -7 305 1 2311 92 3 0 chr20 50514226 50514521 -21639361 + AluSc SINE Alu 5 300 -9 201 231 77 0 chr20 50514564 50514616 -21639266 - L2 LINE L2 -1162 2152 2097 1953 106 36 40 chr20 50514616 50514918 -21638964 + AluSx SINE Alu 1 301 -11 407 271 16 0 chr20 50514920 50515042 -21638840 - L2 LINE L2 -1201 2113 1990 22 0 0 0 chr20 50515505 50515527 -21638355 + AT_rich Low_complexity Low_complexity 1 22 0 218 226 113 0 chr20 50516497 50516559 -21637323 - L2 LINE L2 -1 3312 3244 204 224 35 0 chr20 50516720 50516778 -21637104 - L2 LINE L2 -19 3253 3194 279 0 0 0 chr20 50516926 50516957 -21636925 + (A)n Simple_repeat Simple_repeat 1 31 0 361 212 101 40 chr20 50517418 50517580 -21636302 + MIR3 SINE MIR 23 168 -40 572 251 19 37 chr20 50517842 50518146 -21635736 + MLT1J2 LTR MaLR 62 442 -8 212 289 105 44 chr20 50518268 50518382 -21635500 - L2 LINE L2 -2 3270 3150 2442 122 0 20 chr20 50518528 50518872 -21635010 + MER1B DNA MER1_type 1 337 0 403 263 147 0 chr20 50519366 50519461 -21634421 - MER91A DNA MER1_type -87 109 1 335 192 64 0 chr20 50520004 50520082 -21633800 - L2 LINE L2 0 3313 3231 592 267 36 0 chr20 50522097 50522262 -21631620 - L1ME2 LINE L1 -1 6163 5993 527 233 176 17 chr20 50522439 50522615 -21631267 + MIR SINE MIR 48 251 -11 218 371 97 6 chr20 50523201 50523376 -21630506 + L2 LINE L2 2972 3162 -110 22 35 0 0 chr20 50523425 50523454 -21630428 + AT_rich Low_complexity Low_complexity 1 29 0 289 276 61 70 chr20 50523755 50523983 -21629899 + L1P LINE L1 3550 3775 -2371 1022 165 17 6 chr20 50523984 50524160 -21629722 + AluJo SINE Alu 122 299 -13 873 289 20 37 chr20 50524186 50524729 -21629153 + L1M4 LINE L1 3806 4339 -1807 563 269 100 0 chr20 50524867 50525027 -21628855 + MIR SINE MIR 2 177 -85 1354 244 65 11 chr20 50525349 50525731 -21628151 + LTR16C LTR ERVL 89 491 0 411 106 0 0 chr20 50525946 50526012 -21627870 + (TG)n Simple_repeat Simple_repeat 2 67 0 661 238 14 7 chr20 50526333 50526476 -21627406 - MLT1I LTR MaLR -233 176 33 2810 154 27 32 chr20 50526650 50526665 -21627217 + MER74A LTR ERVL 1 15 -543 2794 29 0 0 chr20 50526665 50526973 -21626909 - AluY SINE Alu -3 308 1 2810 154 27 32 chr20 50526973 50527517 -21626365 + MER74A LTR ERVL 15 557 -1 263 242 165 11 chr20 50528072 50528206 -21625676 + MIR SINE MIR 39 143 -65 1893 106 0 0 chr20 50528246 50528492 -21625390 + AluSc SINE Alu 58 303 -6 938 256 19 34 chr20 50528514 50528834 -21625048 + L1M4 LINE L1 4012 4326 -1820 970 267 76 40 chr20 50528841 50529379 -21624503 - MLT1F1 LTR MaLR 0 590 2 1289 252 47 77 chr20 50529381 50530017 -21623865 + L1M4 LINE L1 4336 4952 -1194 22 35 0 0 chr20 50531165 50531194 -21622688 + GC_rich Low_complexity Low_complexity 1 29 0 32 0 0 0 chr20 50531215 50531247 -21622635 + GC_rich Low_complexity Low_complexity 1 32 0 189 0 0 0 chr20 50531286 50531307 -21622575 + (CGGGGG)n Simple_repeat Simple_repeat 3 23 0 24 0 0 0 chr20 50531321 50531345 -21622537 + GC_rich Low_complexity Low_complexity 1 24 0 180 0 0 0 chr20 50531405 50531425 -21622457 + (CCG)n Simple_repeat Simple_repeat 3 22 0 31 44 0 0 chr20 50531454 50531499 -21622383 + GC_rich Low_complexity Low_complexity 1 45 0 31 26 0 0 chr20 50531534 50531572 -21622310 + GC_rich Low_complexity Low_complexity 1 38 0 361 243 81 27 chr20 50534487 50534598 -21619284 - MIR SINE MIR -59 149 33 1231 184 91 131 chr20 50534850 50534949 -21618933 - L1ME2 LINE L1 0 6164 6063 243 150 0 0 chr20 50534949 50534989 -21618893 - MER3 DNA MER1_type -154 55 16 1231 184 91 131 chr20 50534989 50535392 -21618490 - L1ME2 LINE L1 -101 6063 5648 194 311 122 0 chr20 50535410 50535500 -21618382 + MIR SINE MIR 149 249 -13 629 290 26 33 chr20 50535718 50535990 -21617892 - L2 LINE L2 -2 3311 3042 644 180 28 74 chr20 50536003 50536048 -21617834 - MER5A DNA MER1_type -1 188 142 3173 85 0 5 chr20 50536048 50536495 -21617387 - L1PA10 LINE L1 0 6168 5724 644 180 28 74 chr20 50536495 50536644 -21617238 - MER5A DNA MER1_type -47 142 4 250 246 66 0 chr20 50536700 50536761 -21617121 + L2 LINE L2 3207 3271 -1 244 321 19 22 chr20 50537193 50537354 -21616528 + MIR SINE MIR 57 216 -46 407 149 149 32 chr20 50537439 50537533 -21616349 + L2 LINE L2 3168 3272 0 474 276 123 6 chr20 50537896 50538066 -21615816 + MIR SINE MIR 25 214 -48 999 206 0 0 chr20 50538188 50538363 -21615519 - FRAM SINE Alu -1 175 1 354 335 32 43 chr20 50538536 50538724 -21615158 + MIR SINE MIR 21 206 -56 859 180 24 6 chr20 50538745 50538912 -21614970 - MER20 DNA MER1_type -4 215 46 186 238 0 0 chr20 50539362 50539404 -21614478 - L2 LINE L2 -9 3304 3263 719 216 57 0 chr20 50539926 50540102 -21613780 - MER5A DNA MER1_type -3 186 1 306 278 66 42 chr20 50541485 50541773 -21612109 - HAL1 LINE L1 -1374 1133 839 226 277 59 50 chr20 50542354 50542455 -21611427 - MIR SINE MIR -113 149 48 359 198 74 0 chr20 50542915 50542996 -21610886 + MIR SINE MIR 45 131 -131 477 0 0 0 chr20 50543999 50544052 -21609830 + (CA)n Simple_repeat Simple_repeat 2 54 0 192 179 0 26 chr20 50544064 50544103 -21609779 + MIR SINE MIR 31 68 -194 1091 77 11 27 chr20 50544130 50544313 -21609569 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 198 143 0 0 chr20 50544313 50544348 -21609534 + (TCCC)n Simple_repeat Simple_repeat 3 37 0 746 300 65 33 chr20 50544348 50544685 -21609197 - L2 LINE L2 0 3272 2925 208 259 191 8 chr20 50544732 50544863 -21609019 + MIR SINE MIR 91 245 -17 2023 106 9 81 chr20 50545393 50545741 -21608141 + AluSx SINE Alu 1 312 0 786 295 50 86 chr20 50545772 50546242 -21607640 + L2 LINE L2 2682 3132 -181 2384 105 0 0 chr20 50546242 50546548 -21607334 - AluSg SINE Alu -4 306 1 786 295 50 86 chr20 50546548 50546724 -21607158 + L2 LINE L2 3132 3313 0 1924 146 14 0 chr20 50547676 50547970 -21605912 - AluJb SINE Alu -9 303 6 194 309 0 0 chr20 50547980 50548035 -21605847 + L2 LINE L2 2998 3052 -220 303 286 16 16 chr20 50548198 50548324 -21605558 - L2 LINE L2 -608 2706 2581 798 183 65 11 chr20 50548325 50548511 -21605371 - MER3 DNA MER1_type -4 205 10 340 331 66 13 chr20 50548654 50548805 -21605077 - L1ME LINE L1 -483 5638 5480 313 100 183 0 chr20 50549743 50549803 -21604079 - MLT1A1 LTR MaLR -294 71 1 469 175 252 7 chr20 50549921 50550064 -21603818 - MER5A DNA MER1_type -8 181 4 444 245 63 36 chr20 50550071 50550407 -21603475 - LTR16A1 LTR ERVL 0 457 20 288 0 0 0 chr20 50550677 50550709 -21603173 + (GA)n Simple_repeat Simple_repeat 1 32 0 200 294 47 0 chr20 50550758 50550843 -21603039 - L2 LINE L2 -219 3053 2965 320 286 181 6 chr20 50550876 50551037 -21602845 - MIR SINE MIR -52 210 19 375 73 0 0 chr20 50551327 50551382 -21602500 + (TG)n Simple_repeat Simple_repeat 2 56 0 755 258 46 58 chr20 50551996 50552185 -21601697 - MIR SINE MIR -6 256 69 2471 93 0 3 chr20 50552185 50552496 -21601386 + AluSq SINE Alu 2 311 -2 755 258 46 58 chr20 50552496 50552546 -21601336 - MIR SINE MIR -193 69 20 842 246 79 92 chr20 50552901 50553446 -21600436 - MLT1H LTR MaLR 0 549 12 262 334 195 3 chr20 50553465 50553773 -21600109 - L2 LINE L2 -5 3267 2901 230 305 34 51 chr20 50554434 50554552 -21599330 + MIR SINE MIR 25 140 -68 245 282 16 0 chr20 50555176 50555250 -21598632 - MIR SINE MIR -109 99 43 262 274 16 0 chr20 50555613 50555675 -21598207 + MIR SINE MIR 91 153 -55 725 237 38 5 chr20 50555685 50555871 -21598011 + MIR SINE MIR 1 192 -70 360 267 155 27 chr20 50556194 50556381 -21597501 + MIR SINE MIR 37 247 -15 1751 165 3 36 chr20 50556760 50557063 -21596819 - AluJo SINE Alu -18 294 2 2326 110 0 10 chr20 50557864 50558173 -21595709 - AluSq SINE Alu -7 306 1 257 184 214 39 chr20 50558569 50558672 -21595210 + MIR SINE MIR 97 217 -45 462 184 132 15 chr20 50558752 50558888 -21594994 - MIR SINE MIR -84 178 27 1992 143 0 26 chr20 50558948 50559256 -21594626 + AluJo SINE Alu 13 312 0 408 233 87 12 chr20 50560359 50560530 -21593352 - L1P3 LINE L1 -351 5821 5643 540 328 26 38 chr20 50560708 50561049 -21592833 - L2 LINE L2 -19 3253 2917 445 193 202 8 chr20 50561352 50561471 -21592411 - MIR SINE MIR -101 161 20 372 313 92 18 chr20 50561646 50561809 -21592073 - L1ME4a LINE L1 0 6121 5947 447 309 97 12 chr20 50561893 50562152 -21591730 - L1ME4a LINE L1 -321 5800 5520 243 0 0 0 chr20 50562836 50562863 -21591019 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 189 305 0 34 chr20 50563682 50563741 -21590141 - MIR SINE MIR -16 246 190 * 320 259 126 22 chr20 50563708 50563843 -21590039 + MIR SINE MIR 32 180 -82 371 248 205 31 chr20 50564481 50564642 -21589240 + MIR SINE MIR 22 210 -52 258 247 11 43 chr20 50564797 50564890 -21588992 + MIR SINE MIR 43 132 -76 229 305 9 38 chr20 50565391 50565496 -21588386 + MIR SINE MIR 20 121 -87 562 289 158 9 chr20 50565661 50565983 -21587899 + L2 LINE L2 2372 2741 -573 212 297 99 22 chr20 50566484 50566575 -21587307 + MIR SINE MIR 18 115 -147 1055 282 82 13 chr20 50566996 50567450 -21586432 + L2 LINE L2 2817 3301 -12 568 259 102 42 chr20 50567703 50567834 -21586048 + MIR SINE MIR 13 135 -127 2266 101 3 7 chr20 50567834 50568132 -21585750 + AluSq SINE Alu 1 297 -16 568 259 102 42 chr20 50568132 50568236 -21585646 + MIR SINE MIR 135 262 0 1630 153 16 66 chr20 50568248 50568428 -21585454 - AluJo SINE Alu -8 304 117 219 36 0 0 chr20 50568428 50568456 -21585426 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 2151 92 0 25 chr20 50568456 50568740 -21585142 - AluSc SINE Alu -31 278 2 1630 153 16 66 chr20 50568740 50568878 -21585004 - AluJo SINE Alu -193 119 1 848 276 63 45 chr20 50568900 50569281 -21584601 - MLT1I LTR MaLR -21 388 1 2180 178 69 13 chr20 50569358 50569836 -21584046 + MLT1D LTR MaLR 1 505 0 253 307 62 62 chr20 50570111 50570368 -21583514 - L2 LINE L2 -352 2962 2706 465 292 133 38 chr20 50570526 50571068 -21582814 + L2 LINE L2 2657 3252 -20 524 213 28 0 chr20 50571347 50571455 -21582427 + MIR SINE MIR 38 148 -114 1084 234 94 7 chr20 50571509 50571808 -21582074 + MER46C DNA MER2_type 14 338 0 397 286 133 76 chr20 50572544 50572817 -21581065 + L2 LINE L2 2886 3181 -91 2322 105 7 13 chr20 50572817 50573122 -21580760 + AluSx SINE Alu 3 305 -7 397 286 133 76 chr20 50573122 50573163 -21580719 + L2 LINE L2 3181 3218 -54 439 308 97 57 chr20 50573378 50573880 -21580002 - L1 LINE L1 -755 5391 4878 463 299 152 14 chr20 50573895 50574106 -21579776 + MIR SINE MIR 3 242 -20 808 149 19 39 chr20 50574127 50574217 -21579665 - MLT1B LTR MaLR -46 344 257 2042 137 156 5 chr20 50574217 50574589 -21579293 - MSTA LTR MaLR 0 428 1 808 149 19 39 chr20 50574589 50574652 -21579230 - MLT1B LTR MaLR -133 257 194 182 339 97 8 chr20 50575099 50575223 -21578659 + L2 LINE L2 3138 3272 0 382 250 26 17 chr20 50575727 50575843 -21578039 - MIR SINE MIR -67 141 25 837 313 20 0 chr20 50576470 50576716 -21577166 + MIR SINE MIR 3 253 -9 683 255 75 65 chr20 50576753 50577168 -21576714 + LTR16A LTR ERVL 3 427 -23 349 239 23 85 chr20 50577399 50577529 -21576353 - MIR3 SINE MIR -10 198 77 220 284 74 12 chr20 50578019 50578100 -21575782 + L2 LINE L2 3187 3272 0 349 173 123 25 chr20 50579084 50579165 -21574717 + L2 LINE L2 3225 3313 0 1360 177 20 70 chr20 50579332 50579681 -21574201 - MER33 DNA MER1_type 0 324 1 311 298 11 2 chr20 50580045 50580148 -21573734 + MIR SINE MIR 23 125 -83 231 289 103 0 chr20 50580427 50580524 -21573358 + MIR SINE MIR 119 225 -37 * 635 252 143 17 chr20 50580506 50580736 -21573146 - MIR SINE MIR -3 259 1 280 353 70 11 chr20 50581186 50581373 -21572509 + MIR SINE MIR 45 242 -20 402 271 66 25 chr20 50581938 50582060 -21571822 + L2 LINE L2 3141 3267 -5 335 323 121 0 chr20 50582306 50582554 -21571328 - L2 LINE L2 -1727 1587 1310 334 264 150 93 chr20 50582555 50582801 -21571081 - MIR SINE MIR -1 261 2 2232 112 14 0 chr20 50583017 50583311 -21570571 + AluSx SINE Alu 2 299 -13 245 329 127 27 chr20 50583614 50583945 -21569937 - L2 LINE L2 -800 2514 2151 213 262 0 48 chr20 50583970 50584073 -21569809 + (CCCA)n Simple_repeat Simple_repeat 3 100 0 200 182 0 45 chr20 50584146 50584234 -21569648 + (TCCA)n Simple_repeat Simple_repeat 3 86 0 1007 91 7 0 chr20 50584367 50584510 -21569372 + L1MA2 LINE L1 6126 6269 -35 361 65 0 169 chr20 50584516 50584593 -21569289 + MER33 DNA MER1_type 260 323 -1 370 226 25 6 chr20 50584609 50584768 -21569114 + (TCCA)n Simple_repeat Simple_repeat 1 162 0 300 192 0 0 chr20 50584841 50584893 -21568989 - MIR SINE MIR -130 132 81 255 345 26 18 chr20 50586579 50586684 -21567198 - L2 LINE L2 -17 3255 3150 479 293 114 0 chr20 50586684 50586886 -21566996 + MIR SINE MIR 2 231 -31 215 284 0 30 chr20 50586884 50586951 -21566931 - L2 LINE L2 0 3313 3249 * 289 320 226 6 chr20 50587291 50587472 -21566410 - L2 LINE L2 -52 3220 3000 704 254 12 63 chr20 50587686 50587938 -21565944 - L2 LINE L2 0 3313 3075 804 292 103 11 chr20 50588008 50588385 -21565497 + L1MC4a LINE L1 5502 5913 -1895 330 229 203 17 chr20 50588444 50588562 -21565320 + HAL1 LINE L1 2367 2506 -1 1164 259 31 40 chr20 50588589 50589041 -21564841 + LTR16A1 LTR ERVL 10 457 0 265 276 78 52 chr20 50589090 50589206 -21564676 - MIR SINE MIR -61 201 83 284 323 0 11 chr20 50589567 50589660 -21564222 - L3 LINE CR1 -115 1462 1371 434 333 6 30 chr20 50591928 50592093 -21561789 - MIR SINE MIR -66 196 36 463 316 30 75 chr20 50592107 50592439 -21561443 + L2 LINE L2 2995 3311 -2 249 326 76 0 chr20 50592443 50592535 -21561347 + MIR3 SINE MIR 99 197 -11 1726 221 100 11 chr20 50592668 50593134 -21560748 - MLT1H LTR MaLR 0 549 1 273 57 0 0 chr20 50593323 50593358 -21560524 + (CA)n Simple_repeat Simple_repeat 1 35 0 224 274 39 0 chr20 50593540 50593591 -21560291 - L2 LINE L2 -1 3271 3219 2130 102 7 27 chr20 50593658 50593951 -21559931 - AluSx SINE Alu -25 287 1 286 291 90 26 chr20 50594453 50594617 -21559265 + MIR SINE MIR 15 192 -70 350 155 17 0 chr20 50594671 50594729 -21559153 + LTR16A1 LTR ERVL 63 121 -336 502 245 71 33 chr20 50594800 50594984 -21558898 + LTR16A1 LTR ERVL 265 455 -2 285 343 44 7 chr20 50595082 50595219 -21558663 + L2 LINE L2 2914 3055 -217 315 0 0 0 chr20 50595304 50595339 -21558543 + (TG)n Simple_repeat Simple_repeat 2 36 0 1222 303 133 12 chr20 50595399 50596000 -21557882 - L2 LINE L2 -657 2657 1984 6732 96 36 3 chr20 50596068 50597194 -21556688 + L1MA2 LINE L1 5138 6304 0 30 59 0 0 chr20 50597356 50597407 -21556475 + AT_rich Low_complexity Low_complexity 1 51 0 402 208 9 19 chr20 50597542 50597648 -21556234 + L1MC/D LINE L1 5303 5407 -2401 733 262 122 7 chr20 50597652 50597923 -21555959 + L1MC/D LINE L1 5435 5736 -2072 360 341 100 39 chr20 50598147 50598815 -21555067 - L2 LINE L2 -1269 2045 1337 284 248 213 7 chr20 50600117 50600258 -21553624 + MIR3 SINE MIR 37 206 -2 * 518 247 14 10 chr20 50600253 50600411 -21553471 - MIR SINE MIR -1 261 104 359 252 68 7 chr20 50601631 50601778 -21552104 + MIR3 SINE MIR 33 188 -20 204 250 96 67 chr20 50601964 50602068 -21551814 - L2 LINE L2 -1804 1510 1404 * 267 319 151 12 chr20 50601986 50602152 -21551730 + MIR SINE MIR 48 236 -26 196 162 27 0 chr20 50602167 50602204 -21551678 - MIR SINE MIR -102 160 123 321 26 0 0 chr20 50602797 50602835 -21551047 + (TATG)n Simple_repeat Simple_repeat 2 39 0 2351 98 0 0 chr20 50602835 50603122 -21550760 - AluSx SINE Alu -25 287 1 2097 217 114 15 chr20 50603144 50603324 -21550558 + L1ME3A LINE L1 5452 5613 -557 1826 167 10 3 chr20 50603324 50603612 -21550270 + AluJo SINE Alu 1 290 -22 2097 217 114 15 chr20 50603612 50604082 -21549800 + L1ME3A LINE L1 5613 6170 0 2421 98 0 0 chr20 50604453 50604758 -21549124 - AluSc SINE Alu -4 305 1 456 196 52 0 chr20 50604990 50605087 -21548795 + MIR SINE MIR 80 181 -81 190 276 17 52 chr20 50605136 50605194 -21548688 + L2 LINE L2 3124 3179 -93 268 281 45 45 chr20 50605416 50605505 -21548377 + MIR SINE MIR 30 118 -90 210 296 80 23 chr20 50605507 50605595 -21548287 - MIR SINE MIR -169 93 1 385 295 128 0 chr20 50605599 50605755 -21548127 + MER5A DNA MER1_type 14 189 0 2341 113 0 0 chr20 50606038 50606338 -21547544 + AluSx SINE Alu 1 300 -12 593 295 5 26 chr20 50606344 50606537 -21547345 - MLT1E LTR MaLR -55 538 350 687 245 66 36 chr20 50606552 50606748 -21547134 + MIR SINE MIR 49 250 -12 22 0 0 0 chr20 50606816 50606838 -21547044 + AT_rich Low_complexity Low_complexity 1 22 0 471 244 130 8 chr20 50607592 50607715 -21546167 - MIR3 SINE MIR -35 173 65 417 250 9 28 chr20 50607911 50608019 -21545863 - L2 LINE L2 0 3313 3208 1208 246 132 35 chr20 50608030 50608152 -21545730 - L2 LINE L2 0 3313 3204 1976 131 33 0 chr20 50608152 50608475 -21545407 - AluSx SINE Alu 0 332 1 1208 246 132 35 chr20 50608475 50608782 -21545100 - L2 LINE L2 -109 3204 2841 236 255 0 0 chr20 50609408 50609459 -21544423 - MER58 DNA MER1_type -2366 54 4 280 258 158 0 chr20 50609476 50609596 -21544286 + L2 LINE L2 2338 2476 -838 904 298 106 29 chr20 50609643 50610133 -21543749 - L2 LINE L2 -449 2865 2338 888 227 45 5 chr20 50610135 50610333 -21543549 + MER58A DNA MER1_type 12 217 -7 1839 167 6 10 chr20 50610411 50610722 -21543160 + AluJo SINE Alu 1 310 -2 2012 136 21 0 chr20 50610728 50611015 -21542867 + AluJo SINE Alu 6 298 -14 196 191 143 0 chr20 50611035 50611077 -21542805 + MIR SINE MIR 119 166 -96 4970 93 20 12 chr20 50612054 50612817 -21541065 - L1PA14 LINE L1 -1 6160 5392 434 294 8 0 chr20 50612865 50612984 -21540898 + MER94 DNA DNA 1 120 -14 414 258 94 31 chr20 50613010 50613138 -21540744 + MIR3 SINE MIR 8 143 -65 262 276 162 9 chr20 50613285 50613390 -21540492 - MIR SINE MIR -122 140 20 449 351 78 14 chr20 50613728 50614010 -21539872 + L1M4 LINE L1 2357 2656 -3490 638 255 124 84 chr20 50614065 50614485 -21539397 - L1MDa LINE L1 -2846 3694 3191 2048 148 140 11 chr20 50614485 50614864 -21539018 - MSTA LTR MaLR 0 428 1 638 255 124 84 chr20 50614864 50614982 -21538900 - L1MDa LINE L1 -3349 3191 3079 365 303 62 52 chr20 50615042 50615253 -21538629 - L1MDa LINE L1 -3621 2919 2707 465 19 0 0 chr20 50615261 50615315 -21538567 + (TCTA)n Simple_repeat Simple_repeat 4 57 0 2027 147 0 0 chr20 50615315 50615600 -21538282 - AluSx SINE Alu -27 285 1 355 289 137 8 chr20 50615604 50615837 -21538045 - L1MDa LINE L1 -3892 2648 2454 2384 236 36 0 chr20 50615906 50616512 -21537370 + L1M4 LINE L1 4271 4898 -1248 2946 216 166 52 chr20 50616529 50617617 -21536265 - L2 LINE L2 -337 2977 1765 531 307 94 5 chr20 50617751 50617963 -21535919 + MIR SINE MIR 32 262 0 185 214 0 89 chr20 50618190 50618246 -21535636 - L2 LINE L2 -7 3265 3215 181 263 18 0 chr20 50618437 50618494 -21535388 - MIR SINE MIR -83 125 68 200 88 29 0 chr20 50618678 50618712 -21535170 + L2 LINE L2 3016 3050 -222 927 243 68 40 chr20 50618950 50619102 -21534780 - MIR SINE MIR -3 259 96 2450 168 24 5 chr20 50619102 50619520 -21534362 - MSTB LTR MaLR 0 426 1 927 243 68 40 chr20 50619520 50619618 -21534264 - MIR SINE MIR -166 96 2 1997 119 7 14 chr20 50619724 50620009 -21533873 - AluJb SINE Alu -9 303 21 189 234 62 47 chr20 50620030 50620094 -21533788 - L2 LINE L2 -21 3251 3187 416 284 220 37 chr20 50620278 50620979 -21532903 - L2 LINE L2 -410 2904 2076 1094 121 72 34 chr20 50621433 50621640 -21532242 + L1MA5A LINE L1 6080 6294 -3 510 269 29 49 chr20 50621696 50621941 -21531941 - L1MDa LINE L1 -4909 1621 1382 * 1412 294 50 16 chr20 50621933 50622514 -21531368 + L1M4 LINE L1 3589 4189 -1957 264 278 46 37 chr20 50622517 50622625 -21531257 - L2 LINE L2 -848 2466 2358 323 256 131 15 chr20 50622645 50622782 -21531100 + MIR3 SINE MIR 20 172 -36 215 225 0 0 chr20 50622988 50623028 -21530854 + (TTG)n Simple_repeat Simple_repeat 1 40 0 784 154 7 7 chr20 50623635 50623784 -21530098 - L1MB8 LINE L1 0 6178 6030 1857 179 19 0 chr20 50623788 50624096 -21529786 + 7SLRNA srpRNA srpRNA 1 314 -6 1537 149 27 0 chr20 50624105 50624326 -21529556 + AluJb SINE Alu 2 228 -84 613 203 7 29 chr20 50624355 50624493 -21529389 - L1MB7 LINE L1 -144 6040 5906 274 249 76 96 chr20 50624593 50624790 -21529092 - L2 LINE L2 -340 2974 2782 2108 143 3 0 chr20 50624819 50625119 -21528763 + AluSx SINE Alu 1 301 -11 300 214 171 64 chr20 50625279 50625419 -21528463 - MLT1K LTR MaLR -1 587 433 1029 31 78 0 chr20 50626088 50626217 -21527665 + MER85 DNA T2_type 1 139 0 457 277 81 0 chr20 50626490 50626638 -21527244 + MIR SINE MIR 103 262 0 1525 212 114 30 chr20 50627340 50627806 -21526076 - MLT1D LTR MaLR 0 505 1 263 175 0 0 chr20 50627830 50627870 -21526012 - L2 LINE L2 -20 3293 3254 377 216 35 44 chr20 50629113 50629216 -21524666 + MIR SINE MIR 50 153 -55 737 259 74 109 chr20 50630111 50630390 -21523492 - MLT1H LTR MaLR 0 549 299 2151 131 13 3 chr20 50630390 50630696 -21523186 + AluSx SINE Alu 1 309 -3 737 259 74 109 chr20 50630696 50630983 -21522899 - MLT1H LTR MaLR -250 299 3 632 302 29 41 chr20 50631029 50631274 -21522608 + MIR SINE MIR 1 242 -20 362 284 11 0 chr20 50632731 50632826 -21521056 - MIR SINE MIR -79 183 88 948 144 0 0 chr20 50632832 50632964 -21520918 - AluSq/x SINE Alu -181 132 1 314 306 42 35 chr20 50632975 50633012 -21520870 + L2 LINE L2 2900 2935 -337 1142 157 32 42 chr20 50633012 50633229 -21520653 - MER20 DNA MER1_type 0 219 5 314 306 42 35 chr20 50633229 50633335 -21520547 + L2 LINE L2 2935 3044 -228 698 230 22 11 chr20 50633349 50633527 -21520355 + MER96B DNA MER1_type? 3 182 -235 245 250 89 73 chr20 50633567 50633691 -21520191 + L2 LINE L2 3147 3272 0 382 240 31 10 chr20 50633693 50633789 -21520093 - MIR SINE MIR -94 114 17 901 253 54 5 chr20 50634194 50634415 -21519467 - MIR SINE MIR -10 252 21 291 301 137 16 chr20 50635404 50635621 -21518261 + MIR SINE MIR 10 255 -7 279 0 0 0 chr20 50635621 50635652 -21518230 + (ACTG)n Simple_repeat Simple_repeat 4 34 0 234 0 0 0 chr20 50635654 50635680 -21518202 + (TGAA)n Simple_repeat Simple_repeat 3 28 0 346 310 68 10 chr20 50635780 50635948 -21517934 - MIR3 SINE MIR -63 145 12 378 255 79 37 chr20 50636280 50636464 -21517418 + MIR SINE MIR 22 212 -50 330 215 9 27 chr20 50636524 50636638 -21517244 + MIR SINE MIR 22 131 -77 1351 48 0 0 chr20 50636853 50637019 -21516863 + L1PA8 LINE L1 6006 6171 -1 664 247 32 0 chr20 50637136 50637294 -21516588 + MER5A DNA MER1_type 4 166 -23 1919 145 3 27 chr20 50638179 50638476 -21515406 - AluJb SINE Alu -22 290 1 257 340 26 51 chr20 50638801 50638957 -21514925 + MIR SINE MIR 77 228 -34 234 333 0 0 chr20 50639515 50639578 -21514304 + G-rich Low_complexity Low_complexity 1 63 0 385 185 9 19 chr20 50639622 50639714 -21514168 + GA-rich Low_complexity Low_complexity 1 93 -14 2081 119 0 4 chr20 50639714 50639991 -21513891 + AluSx SINE Alu 28 303 -9 385 185 9 19 chr20 50639991 50640006 -21513876 + GA-rich Low_complexity Low_complexity 93 107 0 787 275 39 11 chr20 50640033 50640317 -21513565 - LTR16B LTR ERVL -172 292 1 600 294 97 69 chr20 50640677 50641129 -21512753 - L1M4 LINE L1 -2749 3397 2933 511 317 60 36 chr20 50641159 50641408 -21512474 - HAL1b LINE L1 0 1348 1094 418 255 55 11 chr20 50641467 50641650 -21512232 - L1MC4a LINE L1 -221 5900 5710 33 0 0 0 chr20 50641686 50641719 -21512163 + AT_rich Low_complexity Low_complexity 1 33 0 646 297 53 27 chr20 50641732 50642069 -21511813 - LTR16A1 LTR ERVL -107 350 5 449 281 137 13 chr20 50642298 50642451 -21511431 + MIR SINE MIR 21 192 -70 2129 88 27 15 chr20 50642684 50642769 -21511113 + L1PB1 LINE L1 5692 5774 -377 189 0 0 0 chr20 50642769 50642790 -21511092 + (TA)n Simple_repeat Simple_repeat 1 21 0 2129 88 27 15 chr20 50642790 50643032 -21510850 + L1PB1 LINE L1 5774 6023 -128 259 313 52 15 chr20 50643975 50644109 -21509773 + L2 LINE L2 2560 2698 -616 180 200 25 0 chr20 50644162 50644202 -21509680 - MIR SINE MIR -86 122 82 448 289 34 102 chr20 50644478 50644772 -21509110 - L2 LINE L2 -6 3266 2993 545 236 54 14 chr20 50645054 50645202 -21508680 - L2 LINE L2 0 3313 3160 456 331 30 6 chr20 50645936 50646105 -21507777 + MIR SINE MIR 11 183 -79 382 298 143 25 chr20 50646232 50646477 -21507405 + L2 LINE L2 1684 1957 -1357 318 302 101 17 chr20 50646905 50647084 -21506798 + L2 LINE L2 2681 2874 -440 273 234 0 0 chr20 50647245 50647292 -21506590 + L2 LINE L2 3207 3253 -19 852 230 17 104 chr20 50648424 50648781 -21505101 - L2 LINE L2 -43 3270 2945 897 183 54 0 chr20 50648789 50648975 -21504907 - MER20 DNA MER1_type 0 219 24 272 238 40 67 chr20 50648992 50649215 -21504667 - L2 LINE L2 -376 2938 2722 1674 208 75 77 chr20 50649923 50650429 -21503453 + MLT1D LTR MaLR 1 505 0 464 284 162 48 chr20 50650585 50651004 -21502878 + L2 LINE L2 2806 3272 0 374 185 12 37 chr20 50651316 50651397 -21502485 + MLT1D LTR MaLR 1 79 -426 276 282 128 10 chr20 50651809 50652004 -21501878 + L2 LINE L2 2828 3045 -227 1088 277 56 15 chr20 50652317 50652711 -21501171 - LTR16A LTR ERVL -8 442 33 501 294 50 23 chr20 50652872 50653093 -21500789 + MIR SINE MIR 6 232 -30 1131 178 36 18 chr20 50653142 50653361 -21500521 + MER58A DNA MER1_type 2 224 0 2284 105 3 0 chr20 50653499 50653794 -21500088 - AluSx SINE Alu -16 296 1 232 284 147 20 chr20 50653886 50653988 -21499894 - MIR SINE MIR -18 244 130 608 251 74 6 chr20 50653997 50654160 -21499722 + MIR SINE MIR 4 177 -85 195 129 0 0 chr20 50654219 50654250 -21499632 + (TTA)n Simple_repeat Simple_repeat 2 32 0 341 150 17 0 chr20 50654292 50654352 -21499530 + MSTA LTR MaLR 368 428 0 1756 108 34 0 chr20 50654354 50654622 -21499260 + MSTA-int LTR MaLR 3 279 -1301 1760 139 4 4 chr20 50654655 50654922 -21498960 + AluJo SINE Alu 2 268 -44 367 207 12 0 chr20 50655021 50655103 -21498779 + L1MA7 LINE L1 6209 6291 0 284 180 0 0 chr20 50655737 50655787 -21498095 - L2 LINE L2 -261 3052 3003 667 242 72 97 chr20 50656070 50656401 -21497481 - LTR16C LTR ERVL -17 474 152 505 260 116 0 chr20 50657045 50657218 -21496664 + MIR SINE MIR 56 248 -14 233 335 126 5 chr20 50657266 50657457 -21496425 - L2 LINE L2 -1415 1899 1686 630 266 163 45 chr20 50657521 50657920 -21495962 - LTR16A1 LTR ERVL -11 446 1 2733 96 25 0 chr20 50658549 50658904 -21494978 - THE1B LTR MaLR 0 364 1 225 310 11 23 chr20 50659288 50659375 -21494507 - L2 LINE L2 -535 2779 2694 619 336 17 14 chr20 50659391 50659686 -21494196 - L2 LINE L2 -754 2560 2265 276 303 62 9 chr20 50660032 50660253 -21493629 - L1ME3 LINE L1 -238 5924 5689 919 183 26 175 chr20 50660255 50660445 -21493437 - LTR37A LTR ERV1 -3 423 206 4404 49 2 0 chr20 50660445 50660979 -21492903 + L1PA5 LINE L1 5620 6154 0 919 183 26 175 chr20 50660979 50661113 -21492769 - LTR37A LTR ERV1 -220 206 194 3553 177 45 18 chr20 50661113 50661830 -21492052 + L1MB3 LINE L1 5445 6180 -3 919 183 26 175 chr20 50661830 50661995 -21491887 - LTR37A LTR ERV1 -232 194 6 369 301 37 31 chr20 50662024 50662187 -21491695 - L1ME3 LINE L1 -2119 5689 5526 390 278 16 8 chr20 50662188 50662341 -21491541 + L1ME3 LINE L1 5355 5511 -663 307 293 93 7 chr20 50662677 50662817 -21491065 + L1M4 LINE L1 2288 2439 -3707 1580 223 83 19 chr20 50662911 50663472 -21490410 + L1MB3 LINE L1 5553 6161 -4 749 139 229 12 chr20 50663698 50663864 -21490018 - MER20 DNA MER1_type 0 219 18 492 310 160 60 chr20 50663876 50664031 -21489851 + L1M4 LINE L1 2266 2404 -3742 3452 24 0 5 chr20 50664031 50664404 -21489478 + SVA Other Other 1016 1386 0 492 310 160 60 chr20 50664404 50664477 -21489405 + L1M4 LINE L1 2404 2468 -3678 2116 136 0 19 chr20 50664477 50664785 -21489097 + AluSx SINE Alu 1 302 -10 492 310 160 60 chr20 50664785 50664929 -21488953 + L1M4 LINE L1 2468 2596 -3550 249 33 0 0 chr20 50664929 50664959 -21488923 + (TA)n Simple_repeat Simple_repeat 1 30 0 492 310 160 60 chr20 50664959 50665356 -21488526 + L1M4 LINE L1 2596 3754 -2392 1599 125 125 23 chr20 50665393 50665657 -21488225 + AluSx SINE Alu 1 291 -21 3868 105 20 5 chr20 50666024 50666577 -21487305 - L1PA10 LINE L1 0 6168 5608 574 124 166 14 chr20 50666609 50666754 -21487128 + L1MA7 LINE L1 6125 6291 0 784 219 37 27 chr20 50667301 50667488 -21486394 - MIR SINE MIR -72 190 2 308 257 7 111 chr20 50668863 50669007 -21484875 - MIR SINE MIR -63 145 17 1077 239 8 31 chr20 50669138 50669393 -21484489 - MIR SINE MIR -13 249 1 364 226 20 54 chr20 50669987 50670102 -21483780 - L1MCa LINE L1 -1339 6983 1996 368 230 0 10 chr20 50670102 50670202 -21483680 + (CATA)n Simple_repeat Simple_repeat 3 101 0 595 222 21 14 chr20 50670203 50670347 -21483535 + LTR37B LTR ERV1 19 163 -305 639 225 19 57 chr20 50670460 50670669 -21483213 + LTR37B LTR ERV1 193 393 -75 186 292 0 0 chr20 50671297 50671345 -21482537 + MIR SINE MIR 102 149 -113 289 306 3 12 chr20 50671489 50671596 -21482286 + MIR SINE MIR 74 181 -27 417 222 159 24 chr20 50671618 50671744 -21482138 - MIR SINE MIR -71 191 49 292 343 106 17 chr20 50671948 50672184 -21481698 - L2 LINE L2 -337 2977 2721 186 286 14 14 chr20 50672335 50672405 -21481477 - L2 LINE L2 -881 2433 2364 1196 257 87 12 chr20 50672476 50672888 -21480994 - LTR16C LTR ERVL -48 443 1 339 278 118 106 chr20 50673243 50673439 -21480443 - L1 LINE L1 -1756 4390 4198 1659 174 12 47 chr20 50673439 50673761 -21480121 - AluJo SINE Alu -1 311 1 339 278 118 106 chr20 50673761 50673989 -21479893 - L1 LINE L1 -1948 4198 3961 1065 221 65 43 chr20 50674203 50674528 -21479354 - MLT1H LTR MaLR 0 549 218 1190 141 26 0 chr20 50674528 50674720 -21479162 + L1PB1 LINE L1 4 200 -6663 9360 176 64 64 chr20 50674722 50678908 -21474974 + L1PB1 LINE L1 636 5130 -1737 438 20 0 0 chr20 50678908 50678959 -21474923 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 9360 176 64 64 chr20 50678959 50680659 -21473223 + L1PB1 LINE L1 5130 6829 -38 304 233 147 17 chr20 50680874 50680990 -21472892 + L1M4 LINE L1 3715 3845 -2301 305 247 24 12 chr20 50681057 50681142 -21472740 - MIR SINE MIR -80 128 43 285 241 49 42 chr20 50681537 50681690 -21472192 - MIR SINE MIR -20 242 45 205 267 0 0 chr20 50681907 50681967 -21471915 - L2 LINE L2 -302 2970 2911 366 294 0 0 chr20 50682712 50682804 -21471078 + MIR SINE MIR 53 144 -118 337 268 0 0 chr20 50682985 50683056 -21470826 - MIR3 SINE MIR -34 174 104 965 202 70 35 chr20 50683698 50684010 -21469872 - LTR16A1 LTR ERVL -2 455 133 192 77 0 0 chr20 50685524 50685550 -21468332 + (CCCCAG)n Simple_repeat Simple_repeat 2 27 0 201 323 87 19 chr20 50686205 50686366 -21467516 + MIR SINE MIR 13 184 -78 1409 222 67 9 chr20 50687368 50687711 -21466171 - MLT1A1 LTR MaLR 0 365 3 462 242 58 21 chr20 50687853 50688043 -21465839 + LTR16A1 LTR ERVL 245 441 -16 554 274 105 5 chr20 50689131 50689321 -21464561 + MIR SINE MIR 12 220 -42 313 187 83 5 chr20 50689383 50689463 -21464419 - MLT1I LTR MaLR 0 409 334 262 287 23 0 chr20 50689489 50689576 -21464306 - MLT1J2 LTR MaLR -143 307 219 2052 116 38 61 chr20 50689694 50690038 -21463844 + MER1B DNA MER1_type 2 337 0 240 267 22 8 chr20 50690116 50690212 -21463670 - MIR SINE MIR -65 143 46 191 305 152 19 chr20 50690729 50690834 -21463048 + MIR SINE MIR 123 241 -21 269 287 28 28 chr20 50690836 50690944 -21462938 + MIR SINE MIR 100 207 -55 285 325 106 16 chr20 50691263 50691386 -21462496 - L2 LINE L2 -3 3269 3136 573 311 97 45 chr20 50691794 50692375 -21461507 - L2 LINE L2 -135 3178 2563 1646 199 41 25 chr20 50692693 50693059 -21460823 + MLT1A2 LTR MaLR 1 372 -2 2425 94 7 0 chr20 50693255 50693563 -21460319 + AluSp SINE Alu 1 310 -3 1294 175 122 16 chr20 50693585 50693888 -21459994 + MER2 DNA MER2_type 9 343 -2 2319 93 0 32 chr20 50693918 50694230 -21459652 + AluY SINE Alu 1 302 -9 362 290 185 37 chr20 50694230 50694386 -21459496 - HAL1 LINE L1 -41 2466 2334 2215 95 3 0 chr20 50694386 50694670 -21459212 - AluY SINE Alu -13 298 14 362 290 185 37 chr20 50694670 50694972 -21458910 - HAL1 LINE L1 -173 2334 1940 1460 259 78 21 chr20 50694976 50695498 -21458384 - HAL1 LINE L1 -629 1878 1327 1987 145 30 0 chr20 50695739 50696036 -21457846 - AluJo SINE Alu -5 307 2 1725 149 72 53 chr20 50696094 50696469 -21457413 - MLT1B LTR MaLR -2 388 7 223 75 0 57 chr20 50697091 50697144 -21456738 + (CAAAA)n Simple_repeat Simple_repeat 2 51 0 313 244 44 0 chr20 50697284 50697374 -21456508 + MIR SINE MIR 167 260 -2 213 333 125 17 chr20 50697513 50697633 -21456249 + MIR3 SINE MIR 1 133 -75 665 301 41 0 chr20 50698491 50698710 -21455172 - MIR SINE MIR -32 230 3 2234 201 31 36 chr20 50698961 50699030 -21454852 - L1ME2 LINE L1 -3 6161 6093 2068 124 3 23 chr20 50699030 50699336 -21454546 - AluSx SINE Alu -12 300 1 2234 201 31 36 chr20 50699336 50699879 -21454003 - L1ME2 LINE L1 -71 6093 5552 421 230 201 28 chr20 50700441 50700724 -21453158 - MLT1G1 LTR MaLR -5 590 259 1932 132 0 35 chr20 50700741 50701030 -21452852 - AluJb SINE Alu -10 302 24 232 65 0 0 chr20 50701140 50701171 -21452711 - MLT1G1 LTR MaLR -342 125 95 1622 203 49 16 chr20 50701175 50701545 -21452337 + MLT1C LTR MaLR 80 461 -6 673 236 64 0 chr20 50701721 50701878 -21452004 - MER20 DNA MER1_type -52 167 1 1685 148 45 21 chr20 50702043 50702334 -21451548 - AluJo SINE Alu -14 298 1 576 209 50 105 chr20 50703032 50703324 -21450558 - L1ME2 LINE L1 -60 6102 5829 1723 139 0 12 chr20 50703324 50703583 -21450299 - AluSx SINE Alu -19 293 38 576 209 50 105 chr20 50703583 50703613 -21450269 - L1ME2 LINE L1 -333 5829 5799 553 137 105 0 chr20 50703859 50703954 -21449928 + L1MA4 LINE L1 6184 6288 -12 425 281 82 0 chr20 50704385 50704520 -21449362 + MIR SINE MIR 107 252 -10 2300 177 12 102 chr20 50704537 50704626 -21449256 + MER70A LTR ERVL 1 96 -376 2145 126 0 7 chr20 50704626 50704919 -21448963 - AluSx SINE Alu -21 291 1 2300 177 12 102 chr20 50704919 50705348 -21448534 + MER70A LTR ERVL 96 472 0 219 244 26 122 chr20 50705348 50705463 -21448419 + MIR SINE MIR 47 150 -58 1062 147 0 0 chr20 50705463 50705606 -21448276 + AluSx SINE Alu 19 161 -151 195 289 0 0 chr20 50705611 50705663 -21448219 + MIR3 SINE MIR 157 208 0 252 291 22 30 chr20 50705691 50705825 -21448057 - L1 LINE L1 -1112 5034 4902 802 240 105 55 chr20 50706658 50707058 -21446824 + MLT1H LTR MaLR 130 549 0 446 286 145 34 chr20 50708268 50708530 -21445352 - HAL1 LINE L1 -7 2500 2210 334 365 22 55 chr20 50708701 50708912 -21444970 - L2 LINE L2 -40 3273 3071 2086 110 7 13 chr20 50708912 50709212 -21444670 + AluSx SINE Alu 1 298 -14 334 365 22 55 chr20 50709212 50709271 -21444611 - L2 LINE L2 -242 3071 3012 563 307 84 0 chr20 50709339 50709564 -21444318 - L1MEc LINE L1 -5920 476 233 590 234 44 6 chr20 50709583 50709741 -21444141 - MLT1B LTR MaLR 0 390 227 799 159 0 16 chr20 50709889 50710015 -21443867 - FLAM_C SINE Alu -14 129 6 827 150 60 30 chr20 50710023 50710190 -21443692 - MLT1B LTR MaLR -217 173 2 387 232 0 0 chr20 50710191 50710273 -21443609 - L1MEc LINE L1 -6194 202 121 457 282 125 78 chr20 50710319 50710540 -21443342 - L1 LINE L1 -2801 3345 3101 2304 116 0 0 chr20 50710540 50710841 -21443041 - AluSx SINE Alu -11 301 1 457 282 125 78 chr20 50710841 50711009 -21442873 - L1 LINE L1 -3045 3101 2942 815 239 108 20 chr20 50711011 50711317 -21442565 - L1ME3A LINE L1 -5 6165 5833 2138 110 7 0 chr20 50711662 50711981 -21441901 + AluSq SINE Alu 1 321 0 1606 194 73 61 chr20 50712299 50712769 -21441113 - MLT1D LTR MaLR -2 503 28 1432 158 16 53 chr20 50712769 50713073 -21440809 - MSTA LTR MaLR 0 428 136 511 153 12 0 chr20 50713347 50713432 -21440450 - MER58B DNA MER1_type 0 341 256 792 144 0 0 chr20 50713432 50713557 -21440325 - MER51C LTR ERV1 0 640 516 830 125 0 0 chr20 50713563 50713683 -21440199 - AluY SINE Alu -3 308 189 796 111 24 0 chr20 50713683 50713809 -21440073 - MER51C LTR ERV1 -114 526 398 3308 112 59 35 chr20 50713929 50714521 -21439361 - LTR18B LTR ERVL 0 614 9 1765 150 26 81 chr20 50715282 50715666 -21438216 - MER51C LTR ERV1 -236 404 1 661 245 21 80 chr20 50715690 50715832 -21438050 - MER58B DNA MER1_type -2197 223 74 2150 126 0 0 chr20 50715832 50716118 -21437764 + AluSx SINE Alu 1 286 -26 423 0 0 0 chr20 50716118 50716165 -21437717 + (CATA)n Simple_repeat Simple_repeat 2 48 0 661 245 21 80 chr20 50716165 50716258 -21437624 - MER58B DNA MER1_type -2344 76 1 402 262 25 25 chr20 50716638 50716760 -21437122 + MIR SINE MIR 93 214 -48 1955 125 33 40 chr20 50717218 50717521 -21436361 - AluSx SINE Alu -11 301 1 6276 108 9 7 chr20 50717682 50718981 -21434901 + L1PA15 LINE L1 4862 6163 -2 461 224 0 0 chr20 50719242 50719358 -21434524 + L1M4 LINE L1 3398 3513 -2633 279 200 0 0 chr20 50719357 50719412 -21434470 - L1 LINE L1 -2710 3436 3382 * 1882 145 18 2 chr20 50719426 50719859 -21434023 + L1M2 LINE L1 5166 5604 -687 671 337 61 15 chr20 50719901 50720230 -21433652 - ERVL LTR ERVL -3929 1835 1492 246 293 14 79 chr20 50720263 50720313 -21433569 - L2 LINE L2 -28 3285 3233 2133 177 11 0 chr20 50720313 50720674 -21433208 + MLT1A1 LTR MaLR 1 365 0 246 293 14 79 chr20 50720674 50720763 -21433119 - L2 LINE L2 -80 3233 3155 22 0 0 0 chr20 50721041 50721063 -21432819 + AT_rich Low_complexity Low_complexity 1 22 0 898 204 6 0 chr20 50721504 50721661 -21432221 + FRAM SINE Alu 1 158 -18 692 245 136 67 chr20 50722402 50722777 -21431105 - MLT1L LTR MaLR -5 610 210 906 268 123 24 chr20 50722935 50723080 -21430802 + LTR16A LTR ERVL 34 163 -287 2341 102 45 23 chr20 50723080 50723434 -21430448 - THE1B LTR MaLR -2 362 1 906 268 123 24 chr20 50723434 50723661 -21430221 + LTR16A LTR ERVL 163 443 -7 220 294 22 87 chr20 50723678 50723770 -21430112 - MIR SINE MIR -120 88 3 923 235 95 41 chr20 50723880 50724174 -21429708 + MLT1J2 LTR MaLR 21 330 -120 197 254 119 0 chr20 50724254 50724313 -21429569 - L2 LINE L2 -65 3207 3142 1039 278 71 71 chr20 50724371 50725057 -21428825 + MER77 LTR ERV1 22 599 -6 430 141 0 0 chr20 50725131 50725202 -21428680 + Alu SINE Alu 240 310 -1 463 239 37 15 chr20 50725346 50725480 -21428402 + MIR3 SINE MIR 58 194 -14 251 354 55 0 chr20 50725540 50725667 -21428215 - L3 LINE CR1 -28 1549 1416 410 278 5 9 chr20 50725694 50725832 -21428050 + MIR SINE MIR 45 183 -60 252 59 0 0 chr20 50726754 50726788 -21427094 + (CA)n Simple_repeat Simple_repeat 2 35 0 2138 122 0 26 chr20 50726962 50727273 -21426609 - AluSx SINE Alu -9 303 1 256 253 84 90 chr20 50727297 50727463 -21426419 - MIR SINE MIR -67 195 31 258 154 179 51 chr20 50727579 50727657 -21426225 + MIR SINE MIR 38 125 -83 417 161 116 27 chr20 50727833 50727945 -21425937 - MIR SINE MIR -41 221 100 234 225 31 108 chr20 50730258 50730387 -21423495 + L2 LINE L2 2935 3053 -219 405 0 0 0 chr20 50731106 50731151 -21422731 + (TG)n Simple_repeat Simple_repeat 1 45 0 202 281 266 23 chr20 50731574 50731702 -21422180 - MIR3 SINE MIR -15 193 35 331 259 146 12 chr20 50731852 50732184 -21421698 + LTR16A1 LTR ERVL 1 457 0 210 219 137 0 chr20 50732941 50733014 -21420868 + MIR SINE MIR 41 123 -85 870 230 77 0 chr20 50733040 50733249 -21420633 - MIR SINE MIR -21 241 17 189 336 67 10 chr20 50733266 50733370 -21420512 + MIR SINE MIR 120 229 -33 2488 77 0 0 chr20 50733539 50733839 -21420043 + AluSc SINE Alu 1 300 -9 692 134 45 30 chr20 50734058 50734192 -21419690 + MER5A DNA MER1_type 1 136 -53 213 277 101 25 chr20 50734211 50734330 -21419552 + L2 LINE L2 2985 3112 -160 576 282 114 10 chr20 50734378 50734580 -21419302 - MIR SINE MIR 0 262 40 262 218 0 0 chr20 50734640 50734695 -21419187 + L2 LINE L2 3236 3290 -23 1024 178 73 14 chr20 50735302 50735521 -21418361 + MLT1J2 LTR MaLR 3 234 -216 1861 176 45 9 chr20 50735545 50735970 -21417912 - Charlie4a DNA MER1_type -8 500 61 1224 221 89 80 chr20 50735972 50736132 -21417750 + LTR16A1 LTR ERVL 1 158 -299 2541 66 0 3 chr20 50736132 50736436 -21417446 + AluY SINE Alu 1 303 -8 1224 221 89 80 chr20 50736436 50736723 -21417159 + LTR16A1 LTR ERVL 158 452 -5 254 78 16 188 chr20 50736725 50736789 -21417093 - Charlie4a DNA MER1_type -449 59 7 381 280 56 0 chr20 50736792 50736935 -21416947 + MLT1J1 LTR MaLR 290 440 -6 701 289 5 20 chr20 50736976 50737180 -21416702 - MIR SINE MIR -31 231 31 1388 108 40 5 chr20 50737180 50737402 -21416480 + MER30 DNA MER1_type 1 230 0 450 267 28 44 chr20 50737670 50737850 -21416032 - L2 LINE L2 -218 3054 2878 299 173 64 109 chr20 50737981 50738091 -21415791 - MIR SINE MIR -74 188 84 652 256 73 61 chr20 50738092 50738251 -21415631 - MIR SINE MIR 0 262 97 1961 142 0 33 chr20 50738251 50738553 -21415329 + AluJo SINE Alu 7 298 -14 652 256 73 61 chr20 50738553 50738639 -21415243 - MIR SINE MIR -165 97 14 201 260 52 39 chr20 50738658 50738735 -21415147 - MIR SINE MIR -183 79 2 188 309 0 18 chr20 50738825 50738880 -21415002 + MIR SINE MIR 17 70 -192 846 169 5 38 chr20 50738880 50739064 -21414818 + MER96B DNA MER1_type? 1 178 -239 461 223 31 46 chr20 50739122 50739252 -21414630 + MIR SINE MIR 87 214 -48 246 341 39 16 chr20 50739908 50740090 -21413792 + L2 LINE L2 2624 2809 -505 454 246 123 29 chr20 50740187 50740358 -21413524 + MER5A DNA MER1_type 1 187 -2 202 224 35 47 chr20 50740846 50740931 -21412951 + L2 LINE L2 2908 2991 -281 429 253 0 10 chr20 50740968 50741067 -21412815 - L2 LINE L2 -1 3312 3215 835 115 0 43 chr20 50741072 50741211 -21412671 + FLAM_C SINE Alu 1 133 0 1095 204 167 7 chr20 50741257 50741366 -21412516 + MER58B DNA MER1_type 1 91 -2329 2069 131 3 23 chr20 50741366 50741672 -21412210 + AluSx SINE Alu 1 300 -12 1095 204 167 7 chr20 50741672 50741856 -21412026 + MER58B DNA MER1_type 91 341 0 460 237 220 17 chr20 50742243 50742420 -21411462 + MIR SINE MIR 6 218 -44 1265 126 44 44 chr20 50742470 50742676 -21411206 + AluJo SINE Alu 87 292 -20 485 131 12 0 chr20 50742676 50742760 -21411122 + GA-rich Low_complexity Low_complexity 3 87 0 270 115 0 39 chr20 50742796 50742848 -21411034 + L1MB5 LINE L1 6094 6143 -31 305 242 21 63 chr20 50743237 50743332 -21410550 - L2 LINE L2 0 3272 3182 333 260 213 0 chr20 50743422 50743549 -21410333 + MIR SINE MIR 109 262 0 3080 165 29 18 chr20 50743641 50744025 -21409857 - L1MB7 LINE L1 -321 5863 5485 2371 73 3 13 chr20 50744025 50744328 -21409554 - AluY SINE Alu -11 300 1 3080 165 29 18 chr20 50744328 50744795 -21409087 - L1MB7 LINE L1 -699 5485 5000 446 133 80 0 chr20 50744844 50744919 -21408963 - MIR SINE MIR -90 172 92 37 23 0 0 chr20 50745073 50745117 -21408765 + AT_rich Low_complexity Low_complexity 1 44 0 1004 171 0 39 chr20 50745209 50745390 -21408492 - FRAM SINE Alu -1 175 2 542 307 28 17 chr20 50745427 50745603 -21408279 + MIR SINE MIR 79 256 -6 2373 110 7 0 chr20 50745813 50746123 -21407759 + AluSx SINE Alu 1 312 0 1340 217 66 22 chr20 50746181 50746606 -21407276 + MLT1D LTR MaLR 12 450 -17 225 0 0 0 chr20 50746606 50746631 -21407251 + (CAAAA)n Simple_repeat Simple_repeat 4 28 0 281 239 68 43 chr20 50746664 50746781 -21407101 - MIR SINE MIR -120 142 23 447 262 79 0 chr20 50747452 50747578 -21406304 + MIR SINE MIR 9 144 -118 1487 212 221 13 chr20 50747604 50748062 -21405820 + MLT1E LTR MaLR 41 593 0 480 197 43 17 chr20 50748062 50748179 -21405703 + MIR SINE MIR 140 259 -3 283 276 31 10 chr20 50748272 50748370 -21405512 + L1MC4a LINE L1 5592 5691 -2117 200 200 229 14 chr20 50748413 50748483 -21405399 + L2 LINE L2 2974 3058 -214 584 281 110 12 chr20 50748556 50748884 -21404998 + L1MC4a LINE L1 5687 6046 -1762 429 36 0 0 chr20 50748888 50748943 -21404939 + (CA)n Simple_repeat Simple_repeat 2 56 0 289 288 29 47 chr20 50748945 50749115 -21404767 + LTR33 LTR ERVL 1 167 -354 368 304 6 17 chr20 50749175 50749431 -21404451 + C-rich Low_complexity Low_complexity 1 253 0 229 249 17 77 chr20 50749442 50749623 -21404259 + C-rich Low_complexity Low_complexity 3 172 0 604 235 84 0 chr20 50749645 50749824 -21404058 + LTR33 LTR ERVL 327 520 -1 299 258 86 0 chr20 50749901 50749994 -21403888 - MIR SINE MIR -45 217 117 426 318 56 96 chr20 50750362 50751388 -21402494 + L1MC5 LINE L1 2131 7745 -216 394 243 37 69 chr20 50751258 50751486 -21402396 - L1MC5 LINE L1 -209 7752 6605 * 188 280 161 32 chr20 50752103 50752196 -21401686 + L2 LINE L2 3137 3241 -31 183 244 0 0 chr20 50752279 50752320 -21401562 - L3 LINE CR1 -11 1566 1526 * 239 174 47 128 chr20 50752286 50752372 -21401510 - MIR3 SINE MIR -22 186 108 418 260 23 73 chr20 50752456 50752633 -21401249 - MIR SINE MIR -27 235 68 210 150 0 0 chr20 50752974 50753014 -21400868 + (CAT)n Simple_repeat Simple_repeat 3 42 0 412 306 200 0 chr20 50753015 50753185 -21400697 - MIR SINE MIR -3 259 56 601 260 6 39 chr20 50753233 50753414 -21400468 + MIR SINE MIR 33 207 -55 202 247 130 0 chr20 50753544 50753621 -21400261 - L2 LINE L2 -36 3236 3150 * 238 296 0 0 chr20 50753620 50753674 -21400208 + MIR SINE MIR 209 262 0 187 355 0 0 chr20 50754186 50754262 -21399620 - L2 LINE L2 0 3272 3197 2233 65 0 81 chr20 50754550 50754857 -21399025 - AluSg SINE Alu -14 296 15 1896 153 0 17 chr20 50754923 50755224 -21398658 - AluJb SINE Alu -16 296 1 283 262 122 33 chr20 50755278 50755492 -21398390 - MER113 DNA MER1_type? -288 233 1 273 215 0 0 chr20 50755726 50755791 -21398091 - MIR SINE MIR -78 130 66 565 239 117 76 chr20 50755851 50756196 -21397686 + L1MC4a LINE L1 5612 5980 -1828 404 152 13 0 chr20 50756196 50756275 -21397607 - MER116 DNA Mariner 0 80 1 565 239 117 76 chr20 50756275 50756364 -21397518 + L1MC4a LINE L1 5980 6064 -1744 2324 93 0 3 chr20 50756420 50756711 -21397171 - AluSg SINE Alu -20 290 1 21 0 0 0 chr20 50756714 50756735 -21397147 + AT_rich Low_complexity Low_complexity 1 21 0 205 204 167 74 chr20 50757370 50757478 -21396404 - MIR SINE MIR -56 206 89 325 241 13 13 chr20 50757667 50757746 -21396136 + MLT1L LTR MaLR 1 79 -536 345 272 60 33 chr20 50757844 50758028 -21395854 + MLT1J LTR MaLR 250 438 -73 1940 108 44 44 chr20 50758053 50758349 -21395533 - AluJo SINE Alu -16 296 1 558 332 41 9 chr20 50758403 50758623 -21395259 + L3 LINE CR1 1312 1538 -39 636 200 188 0 chr20 50758743 50758908 -21394974 + MER3 DNA MER1_type 10 205 -4 624 273 190 19 chr20 50758930 50759351 -21394531 + L2 LINE L2 2817 3309 -4 406 292 105 7 chr20 50759505 50759817 -21394065 - L2 LINE L2 -174 3098 2764 467 239 43 48 chr20 50760084 50760272 -21393610 + LTR16C LTR ERVL 302 488 -3 284 348 50 0 chr20 50760280 50760461 -21393421 - L2 LINE L2 -570 2744 2555 421 345 74 18 chr20 50760891 50761120 -21392762 - MIR SINE MIR -15 247 6 227 252 103 56 chr20 50761272 50761379 -21392503 + MIR SINE MIR 123 234 -28 510 274 31 44 chr20 50761413 50761622 -21392260 - MIR SINE MIR -34 228 21 2183 119 7 3 chr20 50761863 50762165 -21391717 + AluSx SINE Alu 1 303 -9 377 326 0 0 chr20 50762341 50762470 -21391412 + MIR3 SINE MIR 60 188 -20 2363 96 0 0 chr20 50762570 50762873 -21391009 - AluY SINE Alu -8 303 1 522 299 36 21 chr20 50763320 50763514 -21390368 + L1MC4a LINE L1 5458 5654 -2154 479 309 35 17 chr20 50763822 50764052 -21389830 + L1MC4a LINE L1 5675 5908 -1900 289 206 12 101 chr20 50764322 50764421 -21389461 + MIR SINE MIR 25 131 -131 2188 130 0 0 chr20 50764421 50764742 -21389140 + AluSx SINE Alu 1 312 0 289 206 12 101 chr20 50764742 50764828 -21389054 + MIR SINE MIR 131 251 -11 2434 61 3 14 chr20 50765322 50765618 -21388264 + AluY SINE Alu 1 293 -18 190 290 97 0 chr20 50765735 50765859 -21388023 + L2 LINE L2 2553 2688 -626 183 156 0 0 chr20 50765985 50766017 -21387865 + (TG)n Simple_repeat Simple_repeat 2 33 0 2118 105 48 0 chr20 50766238 50766532 -21387350 + AluSx SINE Alu 2 309 -3 329 238 110 64 chr20 50766554 50766726 -21387156 + L1MC5 LINE L1 7249 7491 -542 2016 181 45 19 chr20 50766791 50767254 -21386628 + L1M4 LINE L1 4351 4825 -1321 1930 157 10 22 chr20 50767284 50767597 -21386285 + AluJb SINE Alu 1 309 -3 364 266 11 21 chr20 50767616 50767710 -21386172 + L1MC5 LINE L1 7833 7925 -36 234 329 22 73 chr20 50767711 50767775 -21386107 + Charlie8 DNA MER1_type 93 148 -2269 2297 122 0 0 chr20 50767775 50768079 -21385803 + AluSx SINE Alu 1 304 -8 234 329 22 73 chr20 50768079 50768151 -21385731 + Charlie8 DNA MER1_type 148 222 -2195 583 314 99 32 chr20 50768283 50768731 -21385151 + L2 LINE L2 2792 3267 -5 894 180 49 6 chr20 50768748 50768931 -21384951 + MIR SINE MIR 11 201 -61 972 96 15 29 chr20 50768936 50769072 -21384810 + BC200 scRNA scRNA 3 136 -64 211 274 0 48 chr20 50769072 50769134 -21384748 + MIR SINE MIR 192 250 -12 22 0 0 0 chr20 50769135 50769157 -21384725 + AT_rich Low_complexity Low_complexity 1 22 0 709 296 100 17 chr20 50769300 50769661 -21384221 - MER113 DNA MER1_type? -128 393 3 560 289 40 0 chr20 50769775 50769948 -21383934 - MIR SINE MIR -36 226 47 249 301 122 8 chr20 50770582 50770705 -21383177 + MIR3 SINE MIR 38 174 -34 1582 160 28 9 chr20 50770720 50771038 -21382844 - MER33 DNA MER1_type 0 324 1 442 300 145 15 chr20 50771695 50771895 -21381987 - MIR SINE MIR -29 233 8 240 220 0 0 chr20 50771988 50772038 -21381844 + L1MC3 LINE L1 7048 7097 -688 289 183 11 97 chr20 50772038 50772131 -21381751 + MLT1F1 LTR MaLR 35 119 -448 475 138 12 0 chr20 50772136 50772216 -21381666 + L1MC4 LINE L1 7309 7389 -653 * 1782 205 37 19 chr20 50772209 50772294 -21381588 + L1MD3 LINE L1 7574 7656 -339 2025 159 0 0 chr20 50772294 50772590 -21381292 + AluSx SINE Alu 1 296 -16 1782 205 37 19 chr20 50772590 50772914 -21380968 + L1MD3 LINE L1 7656 7990 -5 338 197 0 0 chr20 50772917 50772978 -21380904 - MER94 DNA DNA -70 64 4 292 213 16 0 chr20 50773000 50773061 -21380821 - MLT1A1 LTR MaLR 0 457 396 * 621 188 31 179 chr20 50773056 50773375 -21380507 - MLT1A1 LTR MaLR -91 274 3 333 250 31 10 chr20 50773536 50773632 -21380250 + MIR3 SINE MIR 65 162 -46 1571 240 58 12 chr20 50773691 50774107 -21379775 + LTR16A LTR ERVL 16 450 0 207 329 13 0 chr20 50774162 50774238 -21379644 - MIR SINE MIR -123 139 63 290 267 99 53 chr20 50774238 50774369 -21379513 - MIR SINE MIR -71 137 1 499 266 22 0 chr20 50774517 50774656 -21379226 + MIR SINE MIR 113 254 -8 200 303 253 0 chr20 50774743 50774842 -21379040 - L2 LINE L2 -270 3043 2920 779 253 34 0 chr20 50774948 50775126 -21378756 + MIR SINE MIR 69 252 -10 382 303 10 26 chr20 50775195 50775564 -21378318 + (TGGG)n Simple_repeat Simple_repeat 1 363 0 326 313 0 21 chr20 50775770 50775914 -21377968 + (TGGA)n Simple_repeat Simple_repeat 1 141 0 1786 111 30 0 chr20 50777352 50777614 -21376268 + AluJb SINE Alu 11 280 -32 973 212 23 23 chr20 50777966 50778183 -21375699 + MIR SINE MIR 2 218 -44 241 205 152 53 chr20 50778279 50778450 -21375432 + L2 LINE L2 2090 2277 -1037 1058 236 79 49 chr20 50778812 50778900 -21374982 + L2 LINE L2 2933 3017 -296 3122 82 65 7 chr20 50778900 50779286 -21374596 + MLT2A2 LTR ERVL 1 363 -90 387 0 0 0 chr20 50779286 50779329 -21374553 + (TA)n Simple_repeat Simple_repeat 2 44 0 333 0 0 0 chr20 50779328 50779365 -21374517 + (CA)n Simple_repeat Simple_repeat 2 38 0 * 3122 82 65 7 chr20 50779329 50779406 -21374476 + MLT2A2 LTR ERVL 363 453 0 1058 236 79 49 chr20 50779406 50779426 -21374456 + L2 LINE L2 3017 3035 -278 484 89 0 78 chr20 50779426 50779516 -21374366 + L1MA1 LINE L1 6213 6295 -7 1058 236 79 49 chr20 50779516 50779774 -21374108 + L2 LINE L2 3035 3311 -2 206 350 67 0 chr20 50779801 50779921 -21373961 + MIR3 SINE MIR 78 205 -3 355 269 179 7 chr20 50780100 50780245 -21373637 - MIR SINE MIR -70 192 23 298 280 11 43 chr20 50780254 50780347 -21373535 - MER5B DNA MER1_type -3 175 86 452 263 35 0 chr20 50780548 50780662 -21373220 - MIR SINE MIR -97 165 48 422 268 169 0 chr20 50780835 50780977 -21372905 + MIR SINE MIR 23 188 -74 1157 214 84 86 chr20 50780987 50781212 -21372670 + L1ME1 LINE L1 5721 5945 -221 432 0 0 0 chr20 50781212 50781260 -21372622 + (CAAA)n Simple_repeat Simple_repeat 2 49 0 1157 214 84 86 chr20 50781260 50781368 -21372514 + L1ME1 LINE L1 5945 6052 -114 2085 107 3 26 chr20 50781368 50781677 -21372205 - AluSq SINE Alu -11 302 1 1157 214 84 86 chr20 50781677 50781782 -21372100 + L1ME1 LINE L1 6052 6159 -7 1481 260 68 14 chr20 50781877 50782651 -21371231 + L2 LINE L2 2498 3313 0 405 270 40 32 chr20 50782742 50782868 -21371014 - MIR SINE MIR -99 163 37 364 336 14 101 chr20 50783482 50783917 -21369965 + L2 LINE L2 2868 3264 -8 327 319 37 12 chr20 50784200 50784344 -21369538 + MIR SINE MIR 33 176 -65 279 270 10 30 chr20 50784396 50784496 -21369386 - L2 LINE L2 -54 3259 3162 278 260 52 0 chr20 50784572 50784649 -21369233 + MIR SINE MIR 168 248 -14 631 175 112 0 chr20 50784837 50785036 -21368846 + Charlie5 DNA MER1_type 2387 2585 -27 216 337 82 10 chr20 50785116 50785214 -21368668 - MIR SINE MIR -66 142 38 2810 113 25 28 chr20 50785323 50785714 -21368168 + MSTB1 LTR MaLR 1 392 -40 2143 105 0 10 chr20 50785714 50786018 -21367864 - AluSg SINE Alu -9 301 1 2810 113 25 28 chr20 50786018 50786059 -21367823 + MSTB1 LTR MaLR 392 432 0 2307 120 126 5 chr20 50786235 50786617 -21367265 + MSTC LTR MaLR 1 428 0 237 319 137 16 chr20 50787460 50787642 -21366240 + L2 LINE L2 2554 2757 -557 679 291 145 0 chr20 50787655 50787896 -21365986 - LTR16A LTR ERVL 0 450 175 735 295 92 49 chr20 50788027 50788529 -21365353 + L2 LINE L2 2766 3272 0 579 223 18 0 chr20 50788689 50788801 -21365081 + MER81 DNA DNA 1 114 0 263 287 0 46 chr20 50788863 50788950 -21364932 + MER63 DNA MER1_type 27 735 -327 1680 166 14 0 chr20 50789022 50789329 -21364553 - AluJo SINE Alu 0 311 1 1196 226 107 89 chr20 50789464 50790138 -21363744 + LTR8A LTR ERV1 1 686 -41 2015 107 4 0 chr20 50790174 50790476 -21363406 + AluSg SINE Alu 1 303 0 537 227 47 28 chr20 50790678 50790834 -21363048 - MIR3 SINE MIR -51 157 16 1827 78 0 0 chr20 50791032 50791263 -21362619 + AluSx SINE Alu 1 231 -81 1492 162 37 24 chr20 50791264 50791561 -21362321 + AluJb SINE Alu 6 306 -6 301 210 0 74 chr20 50791736 50791817 -21362065 + L2 LINE L2 3191 3265 -7 919 219 146 51 chr20 50792485 50792855 -21361027 + L2 LINE L2 2319 2723 -591 803 108 0 0 chr20 50792857 50792968 -21360914 - FLAM_C SINE Alu -2 141 31 378 200 25 0 chr20 50792968 50793048 -21360834 - L1MC4a LINE L1 -449 7359 7278 1812 146 34 0 chr20 50793060 50793355 -21360527 + AluJb SINE Alu 1 305 -7 22 35 0 0 chr20 50793374 50793403 -21360479 + AT_rich Low_complexity Low_complexity 1 29 0 497 335 48 13 chr20 50794410 50794637 -21359245 - MIR SINE MIR -10 252 18 1589 189 50 121 chr20 50794754 50795146 -21358736 + L1M4 LINE L1 4252 4644 -1502 353 111 0 0 chr20 50795146 50795200 -21358682 - Alu SINE Alu 0 302 249 1589 189 50 121 chr20 50795200 50795358 -21358524 + L1M4 LINE L1 4644 4812 -1334 277 185 15 46 chr20 50795676 50795741 -21358141 - MIR SINE MIR -21 241 179 339 196 51 94 chr20 50795743 50795881 -21358001 - MER112 DNA MER1_type -91 169 38 955 183 17 6 chr20 50796080 50796255 -21357627 + MER45A DNA AcHobo 1 177 -1 23 33 0 0 chr20 50796275 50796305 -21357577 + AT_rich Low_complexity Low_complexity 1 30 0 571 227 22 127 chr20 50796333 50796478 -21357404 + MIR SINE MIR 54 168 -94 1943 129 10 3 chr20 50796478 50796773 -21357109 + AluSq SINE Alu 1 297 -16 571 227 22 127 chr20 50796773 50796856 -21357026 + MIR SINE MIR 168 258 -4 1614 134 4 23 chr20 50796872 50797134 -21356748 - AluJb SINE Alu -12 300 44 361 194 69 0 chr20 50797783 50797855 -21356027 + MER112 DNA MER1_type 1 77 -183 644 213 32 43 chr20 50797899 50798087 -21355795 + MER112 DNA MER1_type 65 250 -10 403 346 78 30 chr20 50798207 50798539 -21355343 + L2 LINE L2 2925 3272 0 248 196 324 49 chr20 50798623 50798725 -21355157 - MIR SINE MIR -65 143 14 520 251 300 23 chr20 50799082 50799432 -21354450 + L2 LINE L2 2856 3302 -11 198 0 0 0 chr20 50799433 50799455 -21354427 + (TGAA)n Simple_repeat Simple_repeat 4 25 0 465 151 0 0 chr20 50799555 50799641 -21354241 + (CA)n Simple_repeat Simple_repeat 2 87 0 242 200 0 0 chr20 50799771 50799816 -21354066 + L2 LINE L2 3231 3275 -38 246 326 11 11 chr20 50799848 50799937 -21353945 - MIR SINE MIR -150 112 24 440 178 0 99 chr20 50800377 50800410 -21353472 - MER58 DNA MER1_type -5 2415 2380 1829 146 10 26 chr20 50800410 50800719 -21353163 + AluSx SINE Alu 1 304 -8 440 178 0 99 chr20 50800719 50800786 -21353096 - MER58 DNA MER1_type -40 2380 2325 240 35 0 0 chr20 50800813 50800842 -21353040 + (TTC)n Simple_repeat Simple_repeat 2 30 0 239 355 26 0 chr20 50800846 50800922 -21352960 - MER58 DNA MER1_type -2341 79 2 531 297 46 0 chr20 50800935 50801110 -21352772 - MER5A DNA MER1_type -6 183 1 187 191 95 0 chr20 50801124 50801166 -21352716 - MIR SINE MIR -61 147 102 208 343 118 31 chr20 50801220 50801474 -21352408 + L2 LINE L2 2868 3143 -129 764 165 0 8 chr20 50801485 50801612 -21352270 - FLAM_C SINE Alu -3 130 5 1362 161 4 42 chr20 50801613 50801874 -21352008 + AluJo SINE Alu 57 307 -5 1609 180 0 35 chr20 50801882 50802193 -21351689 + AluJb SINE Alu 1 300 -12 825 187 4 0 chr20 50802210 50802468 -21351414 + (TGGA)n Simple_repeat Simple_repeat 1 259 0 367 250 208 21 chr20 50802607 50802751 -21351131 - MIR SINE MIR -16 246 76 660 149 14 0 chr20 50804934 50805162 -21348720 + (TG)n Simple_repeat Simple_repeat 1 231 0 416 273 31 43 chr20 50805859 50806020 -21347862 - MER5B DNA MER1_type -19 159 1 1490 142 51 40 chr20 50806035 50806331 -21347551 + AluJo SINE Alu 12 310 -2 569 216 85 110 chr20 50806423 50806659 -21347223 + MIR SINE MIR 32 261 -1 1010 149 0 0 chr20 50807028 50807229 -21346653 + AluJb SINE Alu 129 329 0 2212 103 7 0 chr20 50807229 50807539 -21346343 + AluSx SINE Alu 1 312 0 1763 107 0 62 chr20 50807916 50808297 -21345585 - L1PA10 LINE L1 -437 5717 5401 2858 88 37 28 chr20 50808297 50808725 -21345157 + L1PA10 LINE L1 5733 6166 -2 1821 244 190 44 chr20 50808808 50809300 -21344582 + L2 LINE L2 1963 2382 -931 2167 111 3 0 chr20 50809300 50809607 -21344275 + AluSg SINE Alu 1 308 -2 1821 244 190 44 chr20 50809607 50809766 -21344116 + L2 LINE L2 2382 2516 -797 1933 144 0 7 chr20 50809766 50810064 -21343818 + AluSx SINE Alu 1 296 -16 1821 244 190 44 chr20 50810064 50810522 -21343360 + L2 LINE L2 2516 2906 -407 288 0 0 0 chr20 50810522 50810554 -21343328 + (TGAA)n Simple_repeat Simple_repeat 1 32 0 1821 244 190 44 chr20 50810554 50810565 -21343317 + L2 LINE L2 2906 3308 -5 2378 51 3 0 chr20 50811168 50811463 -21342419 - AluY SINE Alu -15 296 1 1293 161 115 35 chr20 50811557 50811621 -21342261 + Charlie1b DNA MER1_type 35 92 -2669 1151 148 101 14 chr20 50811621 50811838 -21342044 + MER46A DNA MER2_type 1 236 0 1293 161 115 35 chr20 50811838 50812203 -21341679 + Charlie1b DNA MER1_type 92 523 0 312 281 41 92 chr20 50814751 50814878 -21339004 + L1MEd LINE L1 813 930 -5275 2393 64 0 0 chr20 50814878 50815204 -21338678 + AluY SINE Alu 1 326 0 312 281 41 92 chr20 50815204 50815270 -21338612 + L1MEd LINE L1 930 998 -5207 4929 144 4 15 chr20 50815291 50815679 -21338203 + MER44D DNA MER2_type 1 251 -2236 1266 194 75 80 chr20 50815679 50816077 -21337805 + MSTD LTR MaLR 1 396 0 4929 144 4 15 chr20 50816077 50816425 -21337457 + MER44D DNA MER2_type 251 601 -4 397 212 0 0 chr20 50816483 50816549 -21337333 + MER58 DNA MER1_type 1 66 -149 543 177 35 18 chr20 50816972 50817085 -21336797 + MER58 DNA MER1_type 2306 2420 0 544 288 65 46 chr20 50817156 50817569 -21336313 + L1MEd LINE L1 1098 1518 -4699 311 283 0 0 chr20 50817575 50817635 -21336247 - MER2 DNA MER2_type -4 341 282 819 180 0 84 chr20 50817724 50817902 -21335980 - MER2 DNA MER2_type -172 173 11 333 269 146 82 chr20 50818123 50818465 -21335417 + L1MEd LINE L1 1863 2186 -4029 612 263 138 38 chr20 50818478 50818634 -21335248 + L1MEd LINE L1 2200 2339 -3876 1804 148 10 26 chr20 50818634 50818945 -21334937 + AluSx SINE Alu 1 306 -6 612 263 138 38 chr20 50818945 50819367 -21334515 + L1MEd LINE L1 2339 2836 -3379 282 263 98 8 chr20 50820102 50820235 -21333647 - L1ME4a LINE L1 -11 6110 5966 333 0 0 0 chr20 50820235 50820272 -21333610 + (CA)n Simple_repeat Simple_repeat 1 37 0 441 302 55 17 chr20 50820341 50820576 -21333306 + L1ME4a LINE L1 5691 5934 -187 254 200 164 9 chr20 50820605 50820715 -21333167 + L1ME4a LINE L1 5992 6118 -3 877 196 83 5 chr20 50821063 50821292 -21332590 - L1PA16 LINE L1 0 6163 5896 1838 138 13 3 chr20 50821377 50821675 -21332207 - AluJb SINE Alu -11 301 1 754 285 68 36 chr20 50822174 50822199 -21331683 + MIR SINE MIR 6 29 -233 2421 66 0 0 chr20 50822199 50822504 -21331378 + AluY SINE Alu 1 305 -6 754 285 68 36 chr20 50822504 50822728 -21331154 + MIR SINE MIR 29 261 -1 265 314 0 0 chr20 50825482 50825552 -21328330 - L2 LINE L2 0 3313 3244 205 246 14 14 chr20 50826966 50827035 -21326847 + G-rich Low_complexity Low_complexity 4 72 0 237 250 29 54 chr20 50827925 50828051 -21325831 + MIR3 SINE MIR 34 155 -53 2262 80 10 13 chr20 50828973 50829272 -21324610 + AluSx SINE Alu 1 298 -14 297 289 52 0 chr20 50829281 50829378 -21324504 + L2 LINE L2 3204 3305 -8 2119 105 3 51 chr20 50830129 50830442 -21323440 + AluSx SINE Alu 1 298 -14 840 251 35 5 chr20 50830496 50830695 -21323187 - MIR SINE MIR -56 206 2 703 254 202 0 chr20 50830811 50831118 -21322764 + L2 LINE L2 2869 3237 -76 474 239 0 44 chr20 50831123 50831303 -21322579 + MER104 DNA Tc2 4 175 -5 321 225 14 0 chr20 50831309 50831380 -21322502 + L2 LINE L2 3242 3313 0 1225 114 34 0 chr20 50831411 50831586 -21322296 - AluSg/x SINE Alu -16 296 116 193 330 76 8 chr20 50831747 50831865 -21322017 - L2 LINE L2 -862 2452 2327 225 309 89 37 chr20 50832007 50832198 -21321684 - L2 LINE L2 -699 2615 2415 1623 167 110 0 chr20 50832288 50832451 -21321431 - AluSx SINE Alu 0 312 168 189 0 0 0 chr20 50832451 50832472 -21321410 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 1623 167 110 0 chr20 50832472 50832589 -21321293 - AluSx SINE Alu -144 168 1 967 182 37 27 chr20 50832610 50832797 -21321085 - MIR SINE MIR -51 211 23 475 314 39 13 chr20 50832832 50833061 -21320821 - L2 LINE L2 -955 2359 2125 301 240 185 14 chr20 50834222 50834368 -21319514 + L1ME3A LINE L1 5995 6165 -5 1455 225 123 54 chr20 50834530 50835090 -21318792 + L1MC4a LINE L1 5307 5905 -1903 216 130 0 0 chr20 50835946 50835992 -21317890 + (TC)n Simple_repeat Simple_repeat 1 46 0 285 51 0 0 chr20 50836037 50836076 -21317806 + (TG)n Simple_repeat Simple_repeat 2 40 0 509 319 122 15 chr20 50836076 50836412 -21317470 + L2 LINE L2 1815 2186 -1128 2295 115 3 3 chr20 50836735 50837047 -21316835 - AluSx SINE Alu 0 312 1 327 312 22 74 chr20 50838257 50838488 -21315394 + L2 LINE L2 2195 2413 -901 37 62 0 0 chr20 50838561 50838626 -21315256 + AT_rich Low_complexity Low_complexity 1 65 0 565 216 22 14 chr20 50838688 50838827 -21315055 - MIR SINE MIR -89 173 34 484 199 102 77 chr20 50838958 50839154 -21314728 + MIR SINE MIR 35 235 -27 1985 147 118 18 chr20 50839156 50839545 -21314337 + MSTB1 LTR MaLR 1 428 -4 2040 174 74 0 chr20 50839632 50840024 -21313858 + MSTB LTR MaLR 6 426 0 261 305 115 43 chr20 50840095 50840400 -21313482 - L1ME LINE L1 -293 5828 5502 2193 123 0 10 chr20 50840646 50840948 -21312934 - AluSx SINE Alu -13 299 1 303 238 215 58 chr20 50841268 50841440 -21312442 - MIR SINE MIR -41 221 23 510 223 45 50 chr20 50841616 50841809 -21312073 + MIR3 SINE MIR 7 192 -65 214 283 0 0 chr20 50841921 50841981 -21311901 + T-rich Low_complexity Low_complexity 1 60 0 3120 149 11 24 chr20 50842022 50842274 -21311608 - L1PA16 LINE L1 -1 6165 5911 2138 113 0 0 chr20 50842274 50842556 -21311326 + AluY SINE Alu 30 311 0 3120 149 11 24 chr20 50842556 50842847 -21311035 - L1PA16 LINE L1 -255 5911 5629 2608 66 0 0 chr20 50843158 50843459 -21310423 + AluSq SINE Alu 1 301 -12 2236 100 7 0 chr20 50843558 50843870 -21310012 - AluSx SINE Alu 0 314 1 1032 145 62 36 chr20 50844091 50844284 -21309598 + MER20 DNA MER1_type 22 219 0 2287 116 0 0 chr20 50844480 50844783 -21309099 - AluSg SINE Alu -6 304 2 232 187 122 81 chr20 50845841 50845964 -21307918 + MIR3 SINE MIR 6 133 -75 304 206 56 65 chr20 50846091 50846198 -21307684 - L1ME4a LINE L1 -5 6116 6011 1976 158 0 3 chr20 50846235 50846539 -21307343 - AluSx SINE Alu -9 303 1 2222 114 10 0 chr20 50847017 50847315 -21306567 + AluSq SINE Alu 1 301 -12 2199 112 17 0 chr20 50847322 50847616 -21306266 + AluSx SINE Alu 1 299 -13 291 250 95 78 chr20 50847648 50847764 -21306118 - L2 LINE L2 -10 3303 3186 443 248 222 15 chr20 50848024 50848222 -21305660 - L3 LINE CR1 -50 1527 1289 359 229 69 13 chr20 50848615 50848722 -21305160 - MER5A DNA MER1_type -69 109 9 2103 129 3 0 chr20 50848788 50849082 -21304800 + AluSx SINE Alu 1 295 -17 216 110 55 55 chr20 50849095 50849168 -21304714 + (TTTA)n Simple_repeat Simple_repeat 2 74 0 247 79 79 13 chr20 50849191 50849267 -21304615 + (TTTA)n Simple_repeat Simple_repeat 2 82 0 1948 127 15 4 chr20 50849274 50849577 -21304305 + AluSx SINE Alu 14 319 0 522 283 0 0 chr20 50849580 50849700 -21304182 + MER5B DNA MER1_type 59 178 0 496 264 18 55 chr20 50849783 50849949 -21303933 + MER5B DNA MER1_type 14 162 -16 331 228 33 11 chr20 50850005 50850097 -21303785 - MER5B DNA MER1_type -82 96 3 * 404 266 56 28 chr20 50850097 50850227 -21303655 + MIR SINE MIR 29 162 -100 559 186 138 25 chr20 50850317 50850513 -21303369 + MLT1J2 LTR MaLR 63 278 -168 302 272 79 18 chr20 50850520 50850634 -21303248 + MLT1J1 LTR MaLR 326 446 0 595 255 74 55 chr20 50850673 50850774 -21303108 + Charlie8 DNA MER1_type 1 99 -242 2153 115 20 0 chr20 50850774 50851070 -21302812 - AluSx SINE Alu -10 302 1 595 255 74 55 chr20 50851070 50851239 -21302643 + Charlie8 DNA MER1_type 99 276 -65 225 267 13 27 chr20 50851557 50851632 -21302250 + MIR SINE MIR 34 107 -101 319 185 22 0 chr20 50851638 50851730 -21302152 + CT-rich Low_complexity Low_complexity 1 94 0 2281 102 3 0 chr20 50851730 50852024 -21301858 - AluSq SINE Alu -18 295 1 24 0 0 0 chr20 50852239 50852263 -21301619 + AT_rich Low_complexity Low_complexity 1 24 0 339 197 0 0 chr20 50852287 50852353 -21301529 - MLT1B LTR MaLR 0 390 325 1263 227 62 9 chr20 50852381 50852702 -21301180 - MLT1B LTR MaLR -52 338 1 2373 119 3 0 chr20 50852743 50853054 -21300828 + AluSx SINE Alu 1 312 0 1902 168 0 3 chr20 50853346 50853631 -21300251 + AluJb SINE Alu 1 284 -28 328 280 149 24 chr20 50853732 50853900 -21299982 + MIR SINE MIR 74 262 0 801 216 144 88 chr20 50854023 50854238 -21299644 - MER46C DNA MER2_type 0 338 98 2705 29 0 6 chr20 50854238 50854551 -21299331 - AluY SINE Alu 0 311 1 801 216 144 88 chr20 50854551 50854654 -21299228 - MER46C DNA MER2_type -240 98 2 2368 107 3 0 chr20 50854859 50855167 -21298715 + AluSx SINE Alu 1 309 -3 241 115 0 58 chr20 50855263 50855315 -21298567 - MLT1L LTR MaLR -421 194 146 257 267 55 24 chr20 50855486 50855531 -21298351 - L1M4 LINE L1 -852 5294 5252 2286 110 56 31 chr20 50855531 50855886 -21297996 + THE1B LTR MaLR 1 364 0 257 267 55 24 chr20 50855886 50856005 -21297877 - L1M4 LINE L1 -894 5252 5125 894 264 61 79 chr20 50856269 50856407 -21297475 - L2 LINE L2 0 3313 3174 2002 141 3 0 chr20 50856407 50856722 -21297160 + AluSp SINE Alu 1 316 0 894 264 61 79 chr20 50856722 50857168 -21296714 - L2 LINE L2 -139 3174 2738 2219 92 7 0 chr20 50857730 50858055 -21295827 + AluSx SINE Alu 1 327 0 272 270 70 84 chr20 50858183 50858309 -21295573 + L2 LINE L2 2901 3024 -248 1524 253 72 13 chr20 50858309 50858768 -21295114 + LTR16C LTR ERVL 4 489 -2 272 270 70 84 chr20 50858768 50858856 -21295026 + L2 LINE L2 3024 3112 -160 1719 146 85 7 chr20 50858950 50859231 -21294651 - AluJb SINE Alu -9 303 1 320 247 72 0 chr20 50859291 50859388 -21294494 + L1MC4 LINE L1 7120 7223 -819 234 305 85 8 chr20 50859400 50859518 -21294364 + L1MC4a LINE L1 7206 7332 -476 564 238 116 65 chr20 50859526 50859908 -21293974 + L1MC4 LINE L1 7258 7672 -289 2057 138 0 3 chr20 50859908 50860197 -21293685 - AluJb SINE Alu -24 288 1 564 238 116 65 chr20 50860197 50860472 -21293410 + L1MC4 LINE L1 7672 7931 -30 * 882 272 164 16 chr20 50860459 50860893 -21292989 + L1MC4a LINE L1 5404 5901 -1907 402 278 0 0 chr20 50860894 50860984 -21292898 + L2 LINE L2 3223 3312 -1 398 266 116 12 chr20 50861116 50861289 -21292593 - Charlie8 DNA MER1_type -2226 191 1 423 212 142 30 chr20 50861337 50861626 -21292256 - MLT1J2 LTR MaLR -9 437 83 342 260 13 0 chr20 50861733 50861810 -21292072 - MIR SINE MIR -108 154 77 2290 120 41 126 chr20 50861869 50862136 -21291746 - MSTA LTR MaLR 0 428 217 204 40 0 0 chr20 50862136 50862161 -21291721 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 2290 120 41 126 chr20 50862161 50862361 -21291521 - MSTA LTR MaLR -211 217 1 362 250 228 7 chr20 50862954 50863090 -21290792 + MIR SINE MIR 49 214 -48 1162 186 84 9 chr20 50863147 50863373 -21290509 + MIR SINE MIR 15 257 -5 212 345 12 36 chr20 50864967 50865051 -21288831 - MIR3 SINE MIR -37 171 90 834 214 12 12 chr20 50865211 50865379 -21288503 - MER5A DNA MER1_type -8 181 14 485 272 12 37 chr20 50865381 50865543 -21288339 + MIR SINE MIR 70 227 -35 2157 125 0 7 chr20 50865579 50865868 -21288014 - AluSx SINE Alu -15 297 11 714 256 110 13 chr20 50866336 50866563 -21287319 + MIR SINE MIR 2 250 -12 1020 280 8 15 chr20 50866749 50867013 -21286869 + MIR SINE MIR 1 262 0 435 273 153 27 chr20 50867014 50867197 -21286685 + MIR SINE MIR 19 224 -38 425 179 137 0 chr20 50867381 50867476 -21286406 + MIR SINE MIR 37 144 -64 738 239 41 32 chr20 50867580 50867798 -21286084 + MIR SINE MIR 43 262 0 316 203 38 0 chr20 50868190 50868269 -21285613 + L2 LINE L2 2725 2806 -508 1803 189 99 20 chr20 50868273 50868729 -21285153 - Charlie4a DNA MER1_type 0 508 17 2127 124 3 23 chr20 50868770 50868898 -21284984 + AluSx SINE Alu 1 130 -182 2289 87 0 0 chr20 50868898 50869175 -21284707 + AluSq SINE Alu 1 277 -36 230 0 33 0 chr20 50869182 50869212 -21284670 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2127 124 3 23 chr20 50869212 50869381 -21284501 + AluSx SINE Alu 136 300 -12 1331 264 80 37 chr20 50869394 50869859 -21284023 + L2 LINE L2 2827 3311 -2 300 96 19 0 chr20 50869902 50869954 -21283928 + L1MC2 LINE L1 6292 6344 0 253 295 13 0 chr20 50869968 50870046 -21283836 - MIR SINE MIR -81 127 49 269 316 9 9 chr20 50870691 50870805 -21283077 + (CA)n Simple_repeat Simple_repeat 1 114 0 192 224 0 0 chr20 50870844 50870911 -21282971 + (CA)n Simple_repeat Simple_repeat 1 67 0 525 276 24 24 chr20 50871077 50871247 -21282635 - MIR3 SINE MIR -22 186 17 416 276 63 24 chr20 50871527 50871654 -21282228 - MIR SINE MIR -116 146 15 485 245 64 80 chr20 50871673 50871802 -21282080 - MIR SINE MIR -25 237 110 2552 93 0 0 chr20 50871802 50872112 -21281770 + AluSx SINE Alu 3 312 0 485 245 64 80 chr20 50872112 50872170 -21281712 - MIR SINE MIR -152 110 53 248 306 117 18 chr20 50872367 50872478 -21281404 + MIR3 SINE MIR 69 190 -18 565 268 34 16 chr20 50872624 50872848 -21281034 + MIR SINE MIR 21 254 -8 1979 143 34 0 chr20 50872928 50873222 -21280660 + AluSx SINE Alu 1 304 -8 391 308 116 7 chr20 50873329 50873475 -21280407 - MIR SINE MIR -99 163 2 377 255 105 20 chr20 50874619 50874772 -21279110 + Charlie8 DNA MER1_type 56 221 -2196 218 234 0 56 chr20 50875218 50875304 -21278578 + CT-rich Low_complexity Low_complexity 1 81 0 204 97 0 0 chr20 50875336 50875367 -21278515 + (TC)n Simple_repeat Simple_repeat 2 32 0 1985 153 0 3 chr20 50876033 50876327 -21277555 - AluSx SINE Alu -9 303 11 246 352 99 7 chr20 50876398 50876540 -21277342 - L2 LINE L2 -44 3228 3074 697 255 80 48 chr20 50876565 50876938 -21276944 + L1MC4a LINE L1 5622 6006 -1802 197 62 0 31 chr20 50877999 50878031 -21275851 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 407 289 102 0 chr20 50878031 50878159 -21275723 - L2 LINE L2 -17 3255 3115 430 309 77 44 chr20 50878358 50879025 -21274857 - L2 LINE L2 -219 3053 2364 1907 134 24 0 chr20 50879248 50879538 -21274344 - AluJo SINE Alu -3 309 13 330 179 36 36 chr20 50879990 50880074 -21273808 + MIR SINE MIR 53 136 -126 2247 119 0 0 chr20 50880102 50880396 -21273486 + AluSx SINE Alu 1 294 -18 28 0 0 0 chr20 50880396 50880424 -21273458 + AT_rich Low_complexity Low_complexity 1 28 0 833 189 184 68 chr20 50880424 50880804 -21273078 - LTR16A1 LTR ERVL -19 438 15 1003 251 30 0 chr20 50881207 50881442 -21272440 + MIR SINE MIR 14 255 -7 471 267 109 45 chr20 50882064 50882268 -21271614 + MIR SINE MIR 37 251 -11 472 260 20 0 chr20 50882286 50882386 -21271496 - MIR SINE MIR -65 143 42 2156 105 3 29 chr20 50882567 50882873 -21271009 + AluSx SINE Alu 1 298 -14 212 195 0 0 chr20 50882983 50883024 -21270858 + MIR SINE MIR 58 98 -110 1719 210 7 49 chr20 50883046 50883392 -21270490 - MLT1B LTR MaLR 0 390 62 1615 108 31 0 chr20 50883392 50883614 -21270268 + MER30 DNA MER1_type 2 230 0 1719 210 7 49 chr20 50883614 50883672 -21270210 - MLT1B LTR MaLR -328 62 3 612 250 26 6 chr20 50883680 50883836 -21270046 - MIR SINE MIR -11 251 93 471 168 26 129 chr20 50883833 50883868 -21270014 + MIR SINE MIR 111 148 -114 * 2339 115 0 3 chr20 50883868 50884172 -21269710 + AluSx SINE Alu 1 303 -9 471 168 26 129 chr20 50884172 50884291 -21269591 + MIR SINE MIR 148 249 -13 683 265 45 27 chr20 50884716 50884939 -21268943 + MIR SINE MIR 34 260 -2 512 293 153 32 chr20 50884948 50885449 -21268433 - L2 LINE L2 -1 3312 2728 526 224 17 63 chr20 50885452 50885626 -21268256 - MLT1H LTR MaLR 0 549 384 353 276 114 24 chr20 50885713 50885836 -21268046 - L2 LINE L2 -1 3312 3179 258 146 10 146 chr20 50885844 50885940 -21267942 - MLT1H LTR MaLR -455 94 12 1422 282 214 34 chr20 50885965 50886190 -21267692 - L2 LINE L2 -604 2710 2527 2035 111 0 0 chr20 50886190 50886451 -21267431 + AluY SINE Alu 1 261 -50 1422 282 214 34 chr20 50886451 50886651 -21267231 - L2 LINE L2 -787 2527 2364 2342 210 45 34 chr20 50886651 50886705 -21267177 - MLT1F1 LTR MaLR 0 567 515 2897 7 0 0 chr20 50886705 50887010 -21266872 - AluYa5 SINE Alu -6 305 1 2342 210 45 34 chr20 50887010 50887516 -21266366 - MLT1F1 LTR MaLR -52 515 1 1579 173 67 7 chr20 50887522 50887806 -21266076 + AluJb SINE Alu 3 303 -9 1422 282 214 34 chr20 50887806 50888302 -21265580 - L2 LINE L2 -954 2360 1614 352 294 7 7 chr20 50888334 50888470 -21265412 - LTR33 LTR ERVL -4 517 382 374 301 68 18 chr20 50888525 50888744 -21265138 - LTR33 LTR ERVL -283 238 9 594 315 120 8 chr20 50888858 50889217 -21264665 - L2 LINE L2 -1866 1448 1050 852 214 37 27 chr20 50889621 50889808 -21264074 + MIR SINE MIR 7 195 -67 492 219 122 30 chr20 50889796 50889960 -21263922 + L2 LINE L2 2020 2198 -1116 * 2837 241 120 69 chr20 50889984 50890361 -21263521 + L2 LINE L2 966 1322 -1992 354 78 0 0 chr20 50890361 50890412 -21263470 - MADE1 DNA Mariner 0 80 30 2837 241 120 69 chr20 50890412 50890482 -21263400 + L2 LINE L2 1322 1387 -1927 401 213 187 26 chr20 50890482 50890637 -21263245 + MER104 DNA MER2_type 1 180 0 2837 241 120 69 chr20 50890637 50891396 -21262486 + L2 LINE L2 1387 2287 -1027 1613 149 21 14 chr20 50891424 50891733 -21262149 - AluJb SINE Alu 0 311 1 193 294 266 18 chr20 50891796 50891905 -21261977 + L2 LINE L2 3137 3272 0 236 244 78 11 chr20 50892060 50892150 -21261732 - L2 LINE L2 -337 2976 2881 2017 138 6 41 chr20 50892580 50893031 -21260851 + AluSx SINE Alu 1 440 0 345 255 0 20 chr20 50893044 50893146 -21260736 - MER113 DNA MER1_type? -218 303 204 827 258 12 42 chr20 50893209 50893449 -21260433 - L2 LINE L2 0 3313 3081 1368 90 0 2 chr20 50893543 50893807 -21260075 - AluSq SINE Alu 0 322 1 2068 255 74 39 chr20 50893817 50894412 -21259470 - L2 LINE L2 -244 3069 2440 2475 107 0 0 chr20 50894412 50894722 -21259160 + AluSx SINE Alu 1 310 -2 2068 255 74 39 chr20 50894722 50894901 -21258981 - L2 LINE L2 -873 2440 2269 2168 146 0 0 chr20 50894920 50895221 -21258661 - AluSx SINE Alu -11 301 1 250 237 103 10 chr20 50895304 50895401 -21258481 - MER113 DNA MER1_type? -415 106 1 186 103 0 0 chr20 50896048 50896077 -21257805 + (GA)n Simple_repeat Simple_repeat 2 30 0 838 188 0 0 chr20 50897186 50897319 -21256563 + FLAM_C SINE Alu 1 133 0 2303 98 10 0 chr20 50897622 50897919 -21255963 + AluSg SINE Alu 1 300 -10 306 0 0 0 chr20 50898210 50898244 -21255638 + (CA)n Simple_repeat Simple_repeat 2 35 0 550 307 0 6 chr20 50898253 50898416 -21255466 - ERVL LTR ERVL -365 5399 5238 3665 273 68 33 chr20 50898494 50900393 -21253489 - ERVL LTR ERVL -657 5107 3274 798 183 15 0 chr20 50900393 50900524 -21253358 + FLAM_A SINE Alu 1 133 0 3665 273 68 33 chr20 50900524 50900934 -21252948 - ERVL LTR ERVL -2490 3274 2879 2302 118 0 0 chr20 50900934 50901231 -21252651 + AluSx SINE Alu 1 297 -15 3665 273 68 33 chr20 50901231 50901426 -21252456 - ERVL LTR ERVL -2885 2879 2422 690 273 19 63 chr20 50901425 50901696 -21252186 - ERVL LTR ERVL -3448 2316 2058 * 940 76 0 0 chr20 50901740 50901871 -21252011 - L1MA3 LINE L1 -34 6271 6141 2056 109 32 3 chr20 50901874 50902158 -21251724 - AluSx SINE Alu -20 292 1 769 170 0 57 chr20 50902166 50902307 -21251575 - AluJo SINE Alu -178 134 2 6823 136 24 14 chr20 50902316 50903556 -21250326 - L1 LINE L1 -1272 4874 3623 316 320 32 56 chr20 50903571 50903822 -21250060 - ERVL LTR ERVL -3650 2030 1799 2618 165 55 20 chr20 50903837 50904292 -21249590 + MER70A LTR ERVL 1 471 -1 2142 120 60 26 chr20 50904297 50904646 -21249236 - THE1B LTR MaLR -2 362 2 333 364 14 0 chr20 50904901 50905044 -21248838 - ERVL LTR ERVL -4285 1479 1335 678 198 16 0 chr20 50905102 50905228 -21248654 + FLAM_A SINE Alu 2 129 -4 1312 295 18 10 chr20 50906526 50906909 -21246973 + LTR16A LTR ERVL 53 438 -12 414 286 14 61 chr20 50906952 50907117 -21246765 - MIR SINE MIR -63 145 35 2154 116 20 0 chr20 50907825 50908118 -21245764 + AluSg SINE Alu 4 302 -8 536 165 0 0 chr20 50908128 50908213 -21245669 + FLAM_C SINE Alu 37 121 -22 562 252 41 50 chr20 50908369 50908587 -21245295 - MLT1J2 LTR MaLR -234 216 1 2173 105 10 7 chr20 50908646 50908940 -21244942 + AluSq SINE Alu 1 295 -18 460 161 20 7 chr20 50908947 50909096 -21244786 + GA-rich Low_complexity Low_complexity 1 151 0 185 265 184 44 chr20 50909117 50909253 -21244629 - MIR3 SINE MIR -24 184 30 1198 123 0 18 chr20 50909255 50909426 -21244456 - FRAM SINE Alu -9 167 1 250 235 20 20 chr20 50909817 50909890 -21243992 + MIR SINE MIR 96 167 -95 * 281 213 276 0 chr20 50909871 50909998 -21243884 - MIR SINE MIR 0 262 101 2131 115 0 7 chr20 50910196 50910483 -21243399 - AluSq SINE Alu -28 285 1 3281 171 13 88 chr20 50910769 50910956 -21242926 - LTR8 LTR ERV1 0 691 492 2319 115 0 10 chr20 50910956 50911270 -21242612 + AluSx SINE Alu 2 312 0 3281 171 13 88 chr20 50911270 50911829 -21242053 - LTR8 LTR ERV1 -199 492 1 2387 100 3 0 chr20 50912209 50912518 -21241364 + AluSp SINE Alu 1 310 -3 403 252 74 44 chr20 50912546 50912681 -21241201 - MIR SINE MIR -111 151 13 2359 111 0 0 chr20 50912863 50913169 -21240713 - AluSx SINE Alu -6 306 1 1558 136 147 19 chr20 50913587 50913845 -21240037 - AluSx SINE Alu -16 296 6 2153 117 3 43 chr20 50914017 50914343 -21239539 - AluSq SINE Alu 0 313 1 728 193 106 0 chr20 50914353 50914514 -21239368 - MIR SINE MIR -43 219 42 316 282 30 23 chr20 50914652 50914783 -21239099 + L2 LINE L2 3138 3269 -3 230 279 81 44 chr20 50914799 50914935 -21238947 - MIR SINE MIR -109 153 13 280 250 78 23 chr20 50915030 50915158 -21238724 - L1MC/D LINE L1 -2057 5751 5617 2283 92 0 0 chr20 50915175 50915482 -21238400 - AluSx SINE Alu 0 307 1 4391 118 114 129 chr20 50915491 50916917 -21236965 + pTR5 LTR ERV1 743 2438 0 1932 147 14 0 chr20 50917152 50917445 -21236437 + AluSx SINE Alu 1 297 -15 493 202 44 18 chr20 50917768 50917882 -21236000 - MIR3 SINE MIR -42 166 50 2060 186 48 3 chr20 50917917 50918294 -21235588 - MSTD LTR MaLR -2 394 1 420 350 78 39 chr20 50918448 50918731 -21235151 + L2 LINE L2 2926 3219 -53 202 235 247 0 chr20 50919795 50919876 -21234006 - MIR SINE MIR -113 149 49 2182 112 32 0 chr20 50920171 50920456 -21233426 - AluSx SINE Alu -18 294 1 857 147 0 16 chr20 50921434 50921563 -21232319 - FLAM_C SINE Alu -16 127 1 321 68 0 0 chr20 50921658 50921702 -21232180 + (CCAA)n Simple_repeat Simple_repeat 2 45 0 2525 64 3 0 chr20 50922081 50922379 -21231503 + AluSp SINE Alu 1 299 -14 2275 112 7 0 chr20 50922428 50922731 -21231151 - AluSx SINE Alu -7 305 1 2255 99 0 0 chr20 50923955 50924266 -21229616 - AluSx SINE Alu 0 311 1 507 224 122 61 chr20 50924295 50924346 -21229536 - MIR SINE MIR -49 213 167 2500 46 0 0 chr20 50924346 50924659 -21229223 + AluY SINE Alu 1 313 0 507 224 122 61 chr20 50924659 50924802 -21229080 - MIR SINE MIR -95 167 6 503 261 97 24 chr20 50924822 50924987 -21228895 - MIR SINE MIR -3 259 83 1884 162 3 22 chr20 50925067 50925382 -21228500 - AluJo SINE Alu -3 309 1 248 248 174 28 chr20 50925433 50925542 -21228340 + MIR3 SINE MIR 38 162 -46 1351 71 24 6 chr20 50925542 50925710 -21228172 - AluSq SINE Alu -17 296 126 2359 119 0 0 chr20 50925710 50926020 -21227862 - AluSx SINE Alu -2 310 1 333 252 148 17 chr20 50926104 50926219 -21227663 + MIR3 SINE MIR 51 180 -28 199 300 0 20 chr20 50926190 50926240 -21227642 + L3 LINE CR1 1525 1573 -4 * 257 260 26 85 chr20 50928016 50928191 -21225691 + MIR SINE MIR 43 207 -55 21 36 0 0 chr20 50928216 50928244 -21225638 + AT_rich Low_complexity Low_complexity 1 28 0 1761 153 0 21 chr20 50928257 50928538 -21225344 - AluJo SINE Alu -36 276 2 29 0 0 0 chr20 50928540 50928569 -21225313 + AT_rich Low_complexity Low_complexity 1 29 0 1971 104 0 92 chr20 50928569 50928886 -21224996 - AluSx SINE Alu -22 290 3 1211 173 14 18 chr20 50928930 50929150 -21224732 + AluJo SINE Alu 89 307 -5 231 200 0 0 chr20 50929323 50929368 -21224514 - MLT1D LTR MaLR -2 503 459 929 109 0 36 chr20 50929383 50929521 -21224361 - FLAM_C SINE Alu 0 133 1 411 80 0 0 chr20 50929615 50929665 -21224217 + Alu SINE Alu 2 51 -258 1601 124 21 8 chr20 50929672 50929906 -21223976 - AluSx SINE Alu -75 237 1 258 224 201 0 chr20 50930345 50930420 -21223462 + MIR SINE MIR 6 88 -120 192 77 0 0 chr20 50930619 50930645 -21223237 + (TTCC)n Simple_repeat Simple_repeat 1 26 0 1218 119 6 6 chr20 50930659 50930835 -21223047 - FRAM SINE Alu 0 176 1 1605 172 111 3 chr20 50930968 50931078 -21222804 - MER63 DNA MER1_type -1 1060 963 2046 145 0 3 chr20 50931078 50931374 -21222508 + AluJo SINE Alu 1 295 -17 1605 172 111 3 chr20 50931374 50931623 -21222259 - MER63 DNA MER1_type -98 963 662 848 140 84 23 chr20 50931662 50931768 -21222114 - MER63 DNA MER1_type -815 246 148 2009 152 0 31 chr20 50931768 50932090 -21221792 - AluJo SINE Alu 0 312 1 848 140 84 23 chr20 50932090 50932197 -21221685 - MER63 DNA MER1_type -913 148 20 1606 124 0 0 chr20 50932198 50932416 -21221466 - AluSg/x SINE Alu -2 308 91 2532 50 3 3 chr20 50932453 50932756 -21221126 - AluY SINE Alu -8 303 1 2454 100 0 0 chr20 50932870 50933180 -21220702 + AluSx SINE Alu 3 312 0 579 221 29 14 chr20 50933224 50933364 -21220518 + MER112 DNA MER1_type 113 254 -6 4104 174 11 10 chr20 50933544 50934208 -21219674 + L1MA7 LINE L1 4494 5161 -985 2197 120 0 0 chr20 50934208 50934500 -21219382 + AluSx SINE Alu 1 292 -20 4104 174 11 10 chr20 50934500 50934668 -21219214 + L1MA7 LINE L1 5161 5327 -819 1050 177 0 6 chr20 50934668 50934843 -21219039 + FRAM SINE Alu 1 169 -7 4999 144 8 52 chr20 50934843 50935491 -21218391 + L1MA7 LINE L1 5325 5913 -378 2388 91 0 19 chr20 50935491 50935809 -21218073 + AluSx SINE Alu 1 312 0 4999 144 8 52 chr20 50935809 50936171 -21217711 + L1MA7 LINE L1 5913 6290 -1 194 262 0 16 chr20 50936181 50936242 -21217640 - L2 LINE L2 -76 3237 3178 281 313 0 0 chr20 50936249 50936313 -21217569 - L2 LINE L2 -2 3270 3207 1287 166 66 118 chr20 50936364 50936447 -21217435 + L1MC5 LINE L1 6741 6827 -1134 790 244 25 106 chr20 50936447 50936853 -21217029 + MER93b LTR ERV1 1 373 0 1287 166 66 118 chr20 50936853 50937175 -21216707 + L1MC5 LINE L1 6827 7122 -839 2143 108 0 65 chr20 50937175 50937499 -21216383 + AluSg SINE Alu 1 303 -7 1287 166 66 118 chr20 50937499 50937549 -21216333 + L1MC5 LINE L1 7122 7173 -788 1373 164 90 90 chr20 50937644 50937956 -21215926 - AluJo SINE Alu 0 312 1 22 0 0 0 chr20 50937959 50937981 -21215901 + AT_rich Low_complexity Low_complexity 1 22 0 25 31 0 0 chr20 50938012 50938044 -21215838 + AT_rich Low_complexity Low_complexity 1 32 0 250 190 51 0 chr20 50938410 50938489 -21215393 + (TA)n Simple_repeat Simple_repeat 1 83 0 1520 163 34 41 chr20 50938590 50938733 -21215149 + AluJo SINE Alu 1 143 -169 2108 143 3 0 chr20 50938733 50939041 -21214841 + AluSx SINE Alu 1 309 -3 1520 163 34 41 chr20 50939041 50939192 -21214690 + AluJo SINE Alu 143 293 -19 2227 112 0 3 chr20 50939308 50939603 -21214279 + AluSx SINE Alu 1 294 -18 449 213 0 0 chr20 50939614 50939708 -21214174 + AluJ/FRAM SINE Alu 218 311 -1 553 229 25 32 chr20 50939780 50939937 -21213945 + L2 LINE L2 3139 3294 -19 2490 75 0 0 chr20 50939976 50940270 -21213612 - AluY SINE Alu -17 294 1 25 31 0 0 chr20 50940325 50940357 -21213525 + AT_rich Low_complexity Low_complexity 1 32 0 2644 50 0 0 chr20 50940358 50940655 -21213227 + AluY SINE Alu 1 297 -14 317 248 120 43 chr20 50940812 50940929 -21212953 - L2 LINE L2 -209 3063 2938 1641 128 25 64 chr20 50941513 50941659 -21212223 + AluJo SINE Alu 1 132 -180 2147 137 3 0 chr20 50941659 50941965 -21211917 + AluSx SINE Alu 1 307 -5 1641 128 25 64 chr20 50941965 50942100 -21211782 + AluJo SINE Alu 132 271 -41 1889 129 14 4 chr20 50942100 50942378 -21211504 + AluJo SINE Alu 11 291 -21 2147 136 0 3 chr20 50942387 50942695 -21211187 + AluSx SINE Alu 1 307 -5 39 0 0 0 chr20 50942699 50942738 -21211144 + AT_rich Low_complexity Low_complexity 1 39 0 1418 139 55 40 chr20 50942738 50943012 -21210870 + AluJo SINE Alu 1 278 -34 239 79 26 0 chr20 50943016 50943054 -21210828 + (TAAAA)n Simple_repeat Simple_repeat 2 40 0 181 200 0 100 chr20 50943085 50943135 -21210747 - MIR SINE MIR -97 165 121 25 65 0 0 chr20 50943275 50943321 -21210561 + GC_rich Low_complexity Low_complexity 1 46 0 1775 149 0 11 chr20 50944088 50944369 -21209513 - AluSx SINE Alu -3 309 32 2017 117 34 10 chr20 50944380 50944671 -21209211 - AluSx SINE Alu -14 298 1 367 309 8 0 chr20 50944858 50944984 -21208898 - L1M4 LINE L1 -1457 4689 4563 192 77 0 0 chr20 50945085 50945111 -21208771 + (TTTTA)n Simple_repeat Simple_repeat 2 27 0 356 306 24 8 chr20 50945124 50945248 -21208634 - MIR SINE MIR -110 152 27 892 158 0 0 chr20 50945615 50945748 -21208134 + FLAM_C SINE Alu 1 133 0 640 204 6 52 chr20 50945756 50945928 -21207954 - L1ME3 LINE L1 -108 6054 5891 301 249 64 88 chr20 50945963 50946025 -21207857 - MIR SINE MIR -44 218 156 1728 166 18 21 chr20 50946025 50946331 -21207551 - AluJb SINE Alu 0 305 1 301 249 64 88 chr20 50946331 50946414 -21207468 - MIR SINE MIR -106 156 75 405 282 29 0 chr20 50946668 50946771 -21207111 + MIR3 SINE MIR 51 156 -52 30 27 0 0 chr20 50946839 50946876 -21207006 + AT_rich Low_complexity Low_complexity 1 37 0 2139 84 0 65 chr20 50946976 50947284 -21206598 + AluSq SINE Alu 2 289 -24 189 0 0 0 chr20 50947285 50947306 -21206576 + (TA)n Simple_repeat Simple_repeat 2 22 0 2380 90 3 3 chr20 50947490 50947790 -21206092 + AluSp SINE Alu 1 300 -13 553 248 50 6 chr20 50947866 50948027 -21205855 + MIR3 SINE MIR 26 193 -15 2158 123 3 7 chr20 50948077 50948379 -21205503 - AluSx SINE Alu -11 301 1 673 315 47 13 chr20 50948401 50948636 -21205246 + MIR SINE MIR 20 262 0 1053 238 60 12 chr20 50948648 50948896 -21204986 - MIR SINE MIR -2 260 1 1610 205 7 7 chr20 50949071 50949373 -21204509 + AluJo SINE Alu 3 304 -8 1753 114 114 4 chr20 50949375 50949667 -21204215 + AluSq SINE Alu 1 320 0 737 234 56 25 chr20 50949917 50950114 -21203768 + MIR SINE MIR 30 232 -30 210 306 16 0 chr20 50950271 50950333 -21203549 + (TG)n Simple_repeat Simple_repeat 2 64 0 369 250 62 56 chr20 50950414 50950558 -21203324 + MIR SINE MIR 89 233 -29 233 337 12 0 chr20 50950780 50950866 -21203016 - MIR SINE MIR -67 141 55 285 29 0 0 chr20 50951370 50951404 -21202478 + (CA)n Simple_repeat Simple_repeat 2 35 0 370 290 0 0 chr20 50951456 50951556 -21202326 + (CA)n Simple_repeat Simple_repeat 2 101 0 726 251 67 20 chr20 50951556 50951751 -21202131 - MIR SINE MIR -11 251 48 1204 151 0 0 chr20 50951884 50952056 -21201826 + AluJb SINE Alu 129 300 -12 1316 105 130 5 chr20 50952058 50952258 -21201624 + AluSg/x SINE Alu 84 308 -2 604 285 95 5 chr20 50952296 50952496 -21201386 + MIR SINE MIR 33 250 -12 211 278 40 29 chr20 50953025 50953198 -21200684 + (TCTCTG)n Simple_repeat Simple_repeat 5 179 0 * 323 291 17 8 chr20 50953088 50953205 -21200677 + CT-rich Low_complexity Low_complexity 2 119 0 208 147 0 0 chr20 50954120 50954154 -21199728 - MIR SINE MIR -110 152 119 291 164 91 0 chr20 50954236 50954291 -21199591 - MIR SINE MIR -111 151 92 427 246 0 93 chr20 50954839 50955022 -21198860 - L2 LINE L2 -41 3272 3107 2186 95 34 3 chr20 50955330 50955625 -21198257 + AluSq SINE Alu 1 304 -9 300 254 155 21 chr20 50955968 50956110 -21197772 + L1MC4a LINE L1 5761 5921 -1887 336 24 0 0 chr20 50956120 50956161 -21197721 + (TG)n Simple_repeat Simple_repeat 2 42 0 2108 121 0 17 chr20 50956323 50956486 -21197396 - AluSx SINE Alu -16 296 139 2270 129 0 0 chr20 50956486 50956795 -21197087 - AluSq SINE Alu -4 309 1 2108 121 0 17 chr20 50956795 50956928 -21196954 - AluSx SINE Alu -173 139 5 1727 133 30 67 chr20 50957074 50957374 -21196508 + AluJb SINE Alu 22 310 -2 356 300 50 8 chr20 50957487 50957607 -21196275 + MIR3 SINE MIR 13 137 -71 605 252 7 33 chr20 50957880 50958031 -21195851 - L2 LINE L2 0 3313 3167 2210 128 0 13 chr20 50958143 50958456 -21195426 + AluSx SINE Alu 1 309 -3 289 313 93 0 chr20 50958537 50958661 -21195221 + MIR3 SINE MIR 42 181 -27 2174 128 0 7 chr20 50959210 50959508 -21194374 + AluSx SINE Alu 1 296 -16 353 266 130 43 chr20 50959684 50959868 -21194014 - MIR SINE MIR 0 262 63 773 158 30 0 chr20 50960224 50960357 -21193525 - AluSg/x SINE Alu 0 309 173 21 36 0 0 chr20 50960358 50960386 -21193496 + AT_rich Low_complexity Low_complexity 1 28 0 1490 198 6 44 chr20 50960396 50960541 -21193341 + AluJo SINE Alu 1 150 -162 2249 105 3 0 chr20 50960541 50960836 -21193046 + AluY SINE Alu 1 296 -15 1490 198 6 44 chr20 50960836 50961009 -21192873 + AluJo SINE Alu 150 307 -5 2120 129 7 3 chr20 50961040 50961343 -21192539 + AluSx SINE Alu 1 304 -8 507 93 221 0 chr20 50961379 50961465 -21192417 + HY1 scRNA scRNA 1 105 -7 238 232 73 73 chr20 50961474 50961625 -21192257 - MER112 DNA MER1_type -92 168 18 1416 172 73 7 chr20 50962062 50962335 -21191547 + AluJo SINE Alu 1 291 -21 2242 133 0 0 chr20 50962351 50962660 -21191222 - AluSx SINE Alu -3 309 1 1903 151 27 3 chr20 50962662 50962954 -21190928 - AluJo SINE Alu -13 299 1 2109 131 0 0 chr20 50963400 50963717 -21190165 + AluSx SINE Alu 1 317 0 1955 141 3 20 chr20 50963743 50964049 -21189833 - AluJo SINE Alu -1 311 11 449 268 36 29 chr20 50964198 50964336 -21189546 - MIR SINE MIR -122 140 2 709 143 0 18 chr20 50964495 50964607 -21189275 - AluJb SINE Alu -4 308 199 448 205 298 12 chr20 50964659 50964820 -21189062 + MIR SINE MIR 8 214 -48 279 208 62 0 chr20 50964945 50965041 -21188841 + CT-rich Low_complexity Low_complexity 1 102 0 1535 173 32 42 chr20 50965041 50965354 -21188528 - AluJb SINE Alu -2 310 1 223 224 153 51 chr20 50965365 50965409 -21188473 + MIR SINE MIR 151 189 -73 1805 112 93 0 chr20 50965409 50965730 -21188152 + AluSx SINE Alu 1 345 0 223 224 153 51 chr20 50965730 50965782 -21188100 + MIR SINE MIR 189 258 -4 236 344 0 0 chr20 50966004 50966068 -21187814 + L2 LINE L2 3209 3272 0 2409 109 0 0 chr20 50966328 50966640 -21187242 + AluSx SINE Alu 1 312 0 1457 153 4 33 chr20 50966772 50967013 -21186869 + AluJo SINE Alu 1 234 -78 207 0 0 0 chr20 50967030 50967053 -21186829 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 230 233 68 27 chr20 50967065 50967138 -21186744 - MIR SINE MIR -78 130 55 714 198 0 0 chr20 50967639 50967755 -21186127 + AluJb SINE Alu 3 118 -194 186 43 0 0 chr20 50967760 50967783 -21186099 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2337 104 3 0 chr20 50967862 50968171 -21185711 + AluSx SINE Alu 3 312 0 389 314 44 7 chr20 50968348 50968485 -21185397 - MIR3 SINE MIR -52 156 15 293 186 49 59 chr20 50968538 50968640 -21185242 + (TCTCTG)n Simple_repeat Simple_repeat 2 102 0 206 250 67 0 chr20 50969133 50969193 -21184689 - MIR SINE MIR -108 154 91 2093 152 3 0 chr20 50969226 50969535 -21184347 + AluSx SINE Alu 1 310 -2 2375 95 3 0 chr20 50969687 50969992 -21183890 + AluSq SINE Alu 3 308 -5 224 240 20 0 chr20 50970004 50970054 -21183828 + MIR SINE MIR 106 156 -106 216 310 13 26 chr20 50970167 50970257 -21183625 + MIR SINE MIR 20 108 -100 2128 139 0 0 chr20 50970354 50970649 -21183233 - AluSx SINE Alu -17 295 1 21 36 0 0 chr20 50970652 50970680 -21183202 + AT_rich Low_complexity Low_complexity 1 28 0 1893 96 77 0 chr20 50970685 50970988 -21182894 - AluSg SINE Alu 0 323 1 534 239 94 0 chr20 50971602 50971719 -21182163 + L2 LINE L2 3181 3308 -5 212 290 48 0 chr20 50971734 50971796 -21182086 + MIR SINE MIR 70 134 -128 294 320 47 23 chr20 50973001 50973173 -21180709 + L1MC4a LINE L1 5727 5902 -1906 551 223 99 12 chr20 50973716 50973886 -21179996 + MIR SINE MIR 20 200 -62 286 224 0 45 chr20 50974695 50974762 -21179120 + MIR SINE MIR 82 145 -63 192 77 0 0 chr20 50974787 50974813 -21179069 + (GAAAA)n Simple_repeat Simple_repeat 5 30 0 2099 131 0 3 chr20 50974868 50975193 -21178689 + AluSx SINE Alu 1 324 0 330 267 35 0 chr20 50975321 50975407 -21178475 + MIR SINE MIR 170 258 -4 461 312 7 22 chr20 50975577 50975715 -21178167 + L2 LINE L2 3136 3271 -1 394 300 27 65 chr20 50975724 50975987 -21177895 - MLT1L LTR MaLR -125 490 238 1013 172 11 5 chr20 50976122 50976308 -21177574 - MER20 DNA MER1_type -2 217 31 215 327 36 27 chr20 50976607 50976717 -21177165 + L2 LINE L2 3162 3272 0 364 223 0 30 chr20 50976756 50976922 -21176960 + (TGGA)n Simple_repeat Simple_repeat 1 161 0 284 258 13 13 chr20 50976964 50977123 -21176759 + (TGGA)n Simple_repeat Simple_repeat 3 161 0 315 223 214 9 chr20 50977355 50977467 -21176415 + MIR SINE MIR 63 197 -65 425 277 96 42 chr20 50977700 50977866 -21176016 + MER5B DNA MER1_type 4 178 0 225 352 0 0 chr20 50977967 50978038 -21175844 - L2 LINE L2 -1 3271 3201 757 178 0 103 chr20 50978045 50978269 -21175613 + AluSc SINE Alu 125 309 0 380 257 52 100 chr20 50978295 50978544 -21175338 - L2 LINE L2 -115 3157 2921 2269 95 6 38 chr20 50978666 50978982 -21174900 + AluSq SINE Alu 1 306 -7 409 352 92 9 chr20 50979085 50979312 -21174570 - MIR SINE MIR -12 250 5 776 183 45 69 chr20 50979337 50979379 -21174503 + MIR SINE MIR 66 108 -154 2264 98 0 44 chr20 50979379 50979696 -21174186 - AluSx SINE Alu -9 303 1 776 183 45 69 chr20 50979696 50979855 -21174027 + MIR SINE MIR 108 262 0 1802 131 74 0 chr20 50980247 50980530 -21173352 - AluSx SINE Alu -8 304 1 761 135 8 8 chr20 50980747 50980880 -21173002 - FLAM_A SINE Alu 0 133 1 2299 110 0 0 chr20 50981007 50981308 -21172574 - AluSg1 SINE Alu -8 301 1 417 225 24 12 chr20 50981404 50981571 -21172311 - MLT1J2 LTR MaLR -249 160 57 373 268 32 32 chr20 50981680 50981694 -21172188 + L1MC4 LINE L1 7852 7865 -177 1526 180 29 41 chr20 50981694 50982010 -21171872 - AluJo SINE Alu 0 312 1 373 268 32 32 chr20 50982010 50982185 -21171697 + L1MC4 LINE L1 7864 8041 -1 1900 152 0 0 chr20 50982265 50982542 -21171340 + AluJb SINE Alu 1 277 -35 320 178 0 14 chr20 50982598 50982671 -21171211 - L1ME3A LINE L1 -8 6162 6091 406 150 9 35 chr20 50982671 50982784 -21171098 - MER112 DNA MER1_type -79 181 72 181 216 297 0 chr20 50982804 50982878 -21171004 - MIR SINE MIR -1 261 166 2355 112 0 0 chr20 50982879 50983183 -21170699 + AluSx SINE Alu 1 304 -8 22 35 0 0 chr20 50983307 50983336 -21170546 + AT_rich Low_complexity Low_complexity 1 29 0 197 231 0 19 chr20 50983547 50983594 -21170288 - MIR SINE MIR -28 234 188 2550 67 3 0 chr20 50983594 50983894 -21169988 + AluSp SINE Alu 1 301 -12 2297 99 10 0 chr20 50983904 50984196 -21169686 + AluSc SINE Alu 1 295 -14 557 209 9 0 chr20 50984207 50984312 -21169570 + FLAM_C SINE Alu 2 107 -36 180 0 0 0 chr20 50984312 50984332 -21169550 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 546 273 35 7 chr20 50984333 50984476 -21169406 - MIR SINE MIR -69 193 47 247 200 0 0 chr20 50984606 50984666 -21169216 + L1MC4 LINE L1 6644 6703 -1339 213 39 0 0 chr20 50984675 50984701 -21169181 + (TA)n Simple_repeat Simple_repeat 1 26 0 2190 144 0 0 chr20 50984701 50985007 -21168875 - AluSx SINE Alu -6 306 1 305 172 0 162 chr20 50985398 50985497 -21168385 + HAL1 LINE L1 2258 2340 -167 2473 80 6 10 chr20 50985506 50985819 -21168063 + AluSq SINE Alu 1 312 -1 706 229 12 18 chr20 50985823 50985989 -21167893 + FRAM SINE Alu 1 165 -1 1337 129 218 0 chr20 50986205 50986453 -21167429 - AluSx SINE Alu 0 302 1 1276 245 87 49 chr20 50986459 50986555 -21167327 + L2 LINE L2 2782 2873 -440 2510 70 0 3 chr20 50986555 50986867 -21167015 - AluY SINE Alu 0 311 1 1276 245 87 49 chr20 50986867 50987268 -21166614 + L2 LINE L2 2873 3313 0 233 314 78 10 chr20 50987689 50987791 -21166091 + MIR3 SINE MIR 52 160 -48 1713 102 0 8 chr20 50987808 50988043 -21165839 - AluSg/x SINE Alu -3 309 77 242 128 0 0 chr20 50988043 50988082 -21165800 + Alu SINE Alu 99 137 -165 2105 127 13 0 chr20 50988083 50988382 -21165500 + AluSx SINE Alu 1 303 -9 366 152 11 54 chr20 50988713 50988805 -21165077 + Charlie5 DNA MER1_type 2498 2585 -27 477 283 157 9 chr20 50989437 50989660 -21164222 + MIR SINE MIR 6 261 -1 1635 174 0 76 chr20 50989697 50990014 -21163868 - AluJo SINE Alu -19 293 1 2084 122 13 22 chr20 50990218 50990530 -21163352 - AluSx SINE Alu -3 309 1 4606 112 6 67 chr20 50990534 50991009 -21162873 - L1PA16 LINE L1 -10 6156 5654 2414 95 0 0 chr20 50991009 50991304 -21162578 - AluSx SINE Alu -17 295 1 4606 112 6 67 chr20 50991304 50992021 -21161861 - L1PA16 LINE L1 -512 5654 5080 309 82 0 0 chr20 50992030 50992079 -21161803 - Alu SINE Alu -2 300 252 377 216 0 0 chr20 50992092 50992166 -21161716 - MIR SINE MIR -81 127 54 268 306 24 0 chr20 50992248 50992333 -21161549 + MER103 DNA DNA 3 89 -77 2226 97 0 64 chr20 50992505 50992816 -21161066 + AluSg SINE Alu 1 291 -19 276 276 0 26 chr20 50992976 50993092 -21160790 - L1MC5 LINE L1 -36 7925 7813 198 0 0 0 chr20 50993097 50993119 -21160763 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 924 105 15 15 chr20 50993460 50993593 -21160289 + AluJb SINE Alu 1 133 -179 2215 158 18 0 chr20 50993605 50993992 -21159890 + L1PA16 LINE L1 5767 6160 -6 1674 111 0 0 chr20 50994021 50994237 -21159645 + AluSq SINE Alu 1 216 -97 459 169 0 0 chr20 50994302 50994391 -21159491 - AluS SINE Alu 0 311 223 319 319 60 12 chr20 50994438 50994604 -21159278 - L1ME LINE L1 -511 5659 5486 355 298 106 26 chr20 50994638 50994805 -21159077 - L1ME LINE L1 -735 5427 5246 2284 115 3 0 chr20 50994812 50995108 -21158774 - AluSx SINE Alu -15 297 1 4680 145 28 54 chr20 50995109 50995246 -21158636 - L1MB3 LINE L1 -48 6135 5996 1626 70 0 91 chr20 50995246 50995489 -21158393 + AluSg/x SINE Alu 92 312 0 4680 145 28 54 chr20 50995489 50996078 -21157804 - L1MB3 LINE L1 -187 5996 5394 1972 139 0 60 chr20 50996078 50996262 -21157620 - AluSx SINE Alu 0 312 155 2540 87 0 0 chr20 50996262 50996572 -21157310 - AluSg SINE Alu 0 310 1 1972 139 0 60 chr20 50996572 50996719 -21157163 - AluSx SINE Alu -157 155 1 4680 145 28 54 chr20 50996719 50996839 -21157043 - L1MB3 LINE L1 -789 5394 5272 1838 166 14 7 chr20 50996839 50997134 -21156748 - AluJo SINE Alu -15 297 1 4680 145 28 54 chr20 50997134 50997519 -21156363 - L1MB3 LINE L1 -911 5272 4924 533 324 44 9 chr20 50997589 50997814 -21156068 - L3 LINE CR1 -54 1523 1291 2012 135 10 16 chr20 50997820 50998123 -21155759 - AluSx SINE Alu -11 301 1 2251 107 0 0 chr20 50998161 50998450 -21155432 - AluSx SINE Alu -22 290 2 463 267 53 27 chr20 50998482 50998669 -21155213 - MIR SINE MIR -28 234 43 2289 112 0 16 chr20 50998770 50999082 -21154800 - AluSc SINE Alu -2 307 1 325 304 171 47 chr20 50999121 50999427 -21154455 - L3 LINE CR1 -457 1120 761 1800 158 17 7 chr20 50999427 50999724 -21154158 + AluJb SINE Alu 1 300 -12 325 304 171 47 chr20 50999724 50999779 -21154103 - L3 LINE CR1 -816 761 714 894 286 8 0 chr20 50999781 51000019 -21153863 - MIR SINE MIR -21 241 2 2164 125 0 10 chr20 51000090 51000394 -21153488 - AluSx SINE Alu -11 301 1 2423 89 0 0 chr20 51000398 51000691 -21153191 - AluSp SINE Alu -20 293 1 401 254 193 4 chr20 51000712 51000976 -21152906 - MER113 DNA MER1_type? -207 314 1 373 291 17 8 chr20 51000979 51001096 -21152786 - MLT1I LTR MaLR -4 405 288 740 223 18 12 chr20 51001151 51001317 -21152565 - MLT1I LTR MaLR -229 180 14 252 0 0 0 chr20 51001600 51001628 -21152254 + (T)n Simple_repeat Simple_repeat 1 28 0 467 126 97 68 chr20 51001892 51001995 -21151887 + FLAM_C SINE Alu 13 118 -25 2036 146 10 0 chr20 51002011 51002305 -21151577 - AluSx SINE Alu -11 301 5 22 35 0 0 chr20 51002311 51002340 -21151542 + AT_rich Low_complexity Low_complexity 1 29 0 2268 96 31 0 chr20 51002398 51002691 -21151191 - AluSx SINE Alu -10 302 1 2289 121 3 0 chr20 51002700 51003007 -21150875 - AluSp SINE Alu -5 308 1 231 191 16 32 chr20 51003009 51003072 -21150810 - MER5B DNA MER1_type -116 62 1 985 195 37 19 chr20 51003114 51003329 -21150553 + MER20 DNA MER1_type 1 219 0 2283 98 51 0 chr20 51003561 51003857 -21150025 + AluSq SINE Alu 1 311 -2 366 346 72 31 chr20 51003857 51004175 -21149707 - L2 LINE L2 -346 2968 2638 270 217 0 0 chr20 51004176 51004236 -21149646 + G-rich Low_complexity Low_complexity 1 60 0 244 294 144 26 chr20 51004276 51004470 -21149412 - L2 LINE L2 -673 2641 2425 976 153 11 51 chr20 51004631 51004808 -21149074 - AluJo SINE Alu -17 295 126 343 250 30 145 chr20 51005767 51005880 -21148002 + L2 LINE L2 3121 3203 -110 763 216 22 0 chr20 51005880 51006065 -21147817 - MER53 DNA DNA 0 189 1 343 250 30 145 chr20 51006065 51006151 -21147731 + L2 LINE L2 3203 3297 -16 445 309 22 8 chr20 51006576 51006726 -21147156 - MIR SINE MIR -63 145 8 398 291 40 40 chr20 51007430 51007578 -21146304 - MIR3 SINE MIR -12 196 49 226 272 84 0 chr20 51008078 51008184 -21145698 + MIR SINE MIR 23 139 -69 338 262 222 18 chr20 51008221 51008496 -21145386 + L1MC4a LINE L1 5840 6170 -1638 25 31 0 0 chr20 51008510 51008542 -21145340 + AT_rich Low_complexity Low_complexity 1 32 0 310 286 186 0 chr20 51008747 51008887 -21144995 - MIR SINE MIR -33 229 64 262 173 264 73 chr20 51008933 51009043 -21144839 - MER5B DNA MER1_type 0 178 48 830 169 0 0 chr20 51009066 51009184 -21144698 - AluJo SINE Alu -194 118 1 230 188 38 25 chr20 51009271 51009339 -21144543 - MIR SINE MIR -79 129 61 685 280 32 5 chr20 51009339 51009525 -21144357 - MER91A DNA MER1_type 0 196 6 681 291 41 5 chr20 51010032 51010228 -21143654 + MIR SINE MIR 17 219 -43 408 242 32 0 chr20 51010258 51010353 -21143529 - MIR SINE MIR -58 204 107 21 36 0 0 chr20 51010411 51010439 -21143443 + AT_rich Low_complexity Low_complexity 1 28 0 630 115 0 0 chr20 51010439 51010526 -21143356 - AluJo SINE Alu -194 118 32 318 222 28 0 chr20 51010842 51010914 -21142968 + MIR3 SINE MIR 87 160 -48 714 269 76 13 chr20 51012649 51012887 -21140995 + MIR SINE MIR 9 261 -1 347 272 80 25 chr20 51013282 51013444 -21140438 - MIR SINE MIR -71 191 21 183 274 188 8 chr20 51013476 51013593 -21140289 - MIR SINE MIR -48 214 77 1457 111 70 0 chr20 51013887 51014158 -21139724 - L1MA4 LINE L1 -3 6297 6008 2041 124 20 24 chr20 51014169 51014467 -21139415 - AluSx SINE Alu -15 297 1 266 200 271 0 chr20 51015349 51015434 -21138448 - MER104 DNA Tc2 0 180 73 312 363 48 0 chr20 51015831 51015955 -21137927 - MIR SINE MIR -58 150 21 490 220 0 19 chr20 51016149 51016308 -21137574 + (CTCA)n Simple_repeat Simple_repeat 1 156 0 267 292 11 0 chr20 51016321 51016410 -21137472 + (CTCA)n Simple_repeat Simple_repeat 2 91 0 631 275 11 11 chr20 51016643 51016821 -21137061 - MER45A DNA AcHobo 0 178 1 201 319 0 14 chr20 51016827 51016899 -21136983 + G-rich Low_complexity Low_complexity 5 75 0 464 275 96 6 chr20 51016908 51017075 -21136807 - MIR SINE MIR -34 228 47 182 215 0 15 chr20 51018773 51018838 -21135044 + (TG)n Simple_repeat Simple_repeat 1 64 0 204 278 56 0 chr20 51019442 51019514 -21134368 + MIR SINE MIR 66 141 -67 559 238 25 12 chr20 51019780 51019940 -21133942 + MIR SINE MIR 31 192 -70 293 253 47 73 chr20 51020229 51020379 -21133503 + MIR3 SINE MIR 26 171 -37 689 284 56 4 chr20 51020707 51020939 -21132943 - MIR SINE MIR -10 252 9 448 203 0 39 chr20 51021012 51021165 -21132717 + (TG)n Simple_repeat Simple_repeat 1 147 0 599 96 35 72 chr20 51021198 51021666 -21132216 + (TG)n Simple_repeat Simple_repeat 1 450 0 31 0 0 0 chr20 51021809 51021840 -21132042 + AT_rich Low_complexity Low_complexity 1 31 0 375 279 12 75 chr20 51021840 51022001 -21131881 - MIR3 SINE MIR -39 169 19 200 283 138 17 chr20 51022377 51022504 -21131378 - MIR3 SINE MIR -52 156 37 277 226 16 0 chr20 51022980 51023042 -21130840 - MIR SINE MIR -12 250 188 592 275 48 11 chr20 51023286 51023475 -21130407 - MIR SINE MIR -20 242 47 382 325 18 24 chr20 51023609 51023778 -21130104 + MIR3 SINE MIR 17 184 -24 315 0 0 0 chr20 51024298 51024333 -21129549 + (TG)n Simple_repeat Simple_repeat 2 36 0 355 319 43 9 chr20 51024743 51024859 -21129023 - MIR SINE MIR -48 160 41 2174 114 7 7 chr20 51024983 51025280 -21128602 + AluSx SINE Alu 1 297 -15 254 243 71 23 chr20 51026195 51026288 -21127594 + MIR3 SINE MIR 69 167 -41 2302 95 17 0 chr20 51026377 51026673 -21127209 - AluSq SINE Alu -12 301 1 335 269 157 22 chr20 51027207 51027341 -21126541 - MIR3 SINE MIR -14 194 43 1978 141 20 7 chr20 51028319 51028618 -21125264 + AluJo SINE Alu 1 303 -9 760 283 149 12 chr20 51028646 51029268 -21124614 - L2 LINE L2 -1 3312 2566 231 317 65 16 chr20 51029389 51029512 -21124370 - MIR3 SINE MIR -70 138 10 209 326 43 11 chr20 51030042 51030134 -21123748 - L3 LINE CR1 -176 1401 1307 357 196 68 0 chr20 51030668 51030758 -21123124 + MIR SINE MIR 61 146 -62 992 221 48 36 chr20 51031311 51031560 -21122322 - MIR SINE MIR -2 260 9 446 310 13 16 chr20 51031597 51031786 -21122096 + MIR SINE MIR 30 219 -43 439 297 20 0 chr20 51032898 51032999 -21120883 - MIR SINE MIR -69 139 37 196 200 67 0 chr20 51033270 51033315 -21120567 - L2 LINE L2 -1 3312 3265 415 248 37 137 chr20 51033348 51033670 -21120212 + L2 LINE L2 3024 3313 0 299 278 56 40 chr20 51034103 51034229 -21119653 + MER5B DNA MER1_type 1 128 -50 2347 97 13 0 chr20 51034231 51034531 -21119351 + AluSx SINE Alu 1 304 -8 237 298 106 11 chr20 51034700 51034794 -21119088 - MIR SINE MIR -86 122 20 260 240 19 39 chr20 51034814 51034918 -21118964 - MIR SINE MIR -94 168 67 2114 131 7 0 chr20 51035325 51035616 -21118266 - AluSx SINE Alu -19 293 1 907 249 42 8 chr20 51035725 51035962 -21117920 - MIR SINE MIR -10 252 8 233 246 58 58 chr20 51036069 51036138 -21117744 + MIR SINE MIR 79 147 -115 2310 83 35 0 chr20 51036590 51036879 -21117003 + AluSx SINE Alu 1 299 -13 253 286 36 0 chr20 51036927 51037011 -21116871 + CT-rich Low_complexity Low_complexity 2 88 0 1341 186 6 113 chr20 51037040 51037385 -21116497 + AluSp SINE Alu 3 310 -3 280 286 100 12 chr20 51037414 51037655 -21116227 - HAL1 LINE L1 -77 2430 2169 226 270 0 16 chr20 51037928 51037991 -21115891 - MIR SINE MIR -11 251 190 2333 103 0 0 chr20 51038012 51038302 -21115580 + AluSq SINE Alu 1 290 -23 424 41 54 61 chr20 51038302 51038449 -21115433 + (TA)n Simple_repeat Simple_repeat 1 146 0 786 249 80 27 chr20 51038478 51038703 -21115179 - MIR SINE MIR -12 250 14 273 241 0 0 chr20 51038903 51038961 -21114921 + L2 LINE L2 3255 3312 -1 222 183 0 0 chr20 51039181 51039252 -21114630 + (TA)n Simple_repeat Simple_repeat 2 72 0 1852 135 4 0 chr20 51039253 51039519 -21114363 - AluSx SINE Alu -45 267 1 312 314 132 68 chr20 51039521 51039575 -21114307 - L2 LINE L2 -8 3264 3215 2169 103 4 0 chr20 51039575 51039880 -21114002 + AluSx SINE Alu 1 306 0 312 314 132 68 chr20 51039880 51040149 -21113733 - L2 LINE L2 -57 3215 2919 371 292 33 16 chr20 51040154 51040281 -21113601 + MIR3 SINE MIR 30 161 -47 431 277 0 0 chr20 51040861 51040962 -21112920 + MIR SINE MIR 49 149 -113 669 277 201 81 chr20 51040988 51041528 -21112354 - L2 LINE L2 -26 3287 2813 1980 141 3 7 chr20 51041528 51041819 -21112063 - AluSx SINE Alu -18 294 5 669 277 201 81 chr20 51041819 51042184 -21111698 - L2 LINE L2 -500 2813 2493 2161 146 0 16 chr20 51042184 51042500 -21111382 - AluJo SINE Alu -1 311 1 669 277 201 81 chr20 51042500 51043007 -21110875 - L2 LINE L2 -820 2493 1724 643 291 42 4 chr20 51043007 51043062 -21110820 - L2 LINE L2 -2268 1046 995 2062 133 3 13 chr20 51043062 51043363 -21110519 + AluSx SINE Alu 1 298 -14 643 291 42 4 chr20 51043363 51043544 -21110338 - L2 LINE L2 -2319 995 801 1135 185 58 5 chr20 51043546 51043751 -21110131 - MER20 DNA MER1_type -3 216 1 659 231 11 48 chr20 51043840 51044026 -21109856 + MIR SINE MIR 84 262 0 295 345 136 12 chr20 51044292 51044547 -21109335 - L2 LINE L2 -213 3059 2777 308 262 12 48 chr20 51045873 51045957 -21107925 - MIR3 SINE MIR -8 200 120 191 303 99 31 chr20 51046982 51047144 -21106738 - L2 LINE L2 -203 3069 2897 206 299 37 19 chr20 51047434 51047541 -21106341 - MIR SINE MIR -18 244 136 397 247 11 40 chr20 51047597 51047725 -21106157 - MIR SINE MIR -69 139 14 216 0 0 0 chr20 51048885 51048909 -21104973 + (T)n Simple_repeat Simple_repeat 1 24 0 288 227 153 39 chr20 51049534 51049677 -21104205 - MIR SINE MIR -61 147 32 221 28 83 0 chr20 51049894 51049930 -21103952 + T-rich Low_complexity Low_complexity 2 40 0 1986 170 0 0 chr20 51049939 51050251 -21103631 + AluJo SINE Alu 1 312 0 789 199 102 16 chr20 51050382 51050568 -21103314 - MER63A DNA MER1_type -6 204 3 332 206 174 0 chr20 51050714 51050806 -21103076 + MIR SINE MIR 83 190 -72 485 202 30 0 chr20 51051292 51051391 -21102491 - MIR SINE MIR -115 147 46 2463 98 0 0 chr20 51051432 51051738 -21102144 + AluSx SINE Alu 1 306 -6 534 184 0 0 chr20 51051751 51051838 -21102044 + LTR26B LTR ERV1 384 470 -61 1287 144 19 19 chr20 51051875 51052090 -21101792 - AluJo SINE Alu -12 300 86 457 224 121 55 chr20 51052442 51052553 -21101329 - MIR SINE MIR -11 251 124 1890 158 0 31 chr20 51052553 51052870 -21101012 + AluSx SINE Alu 1 307 -5 457 224 121 55 chr20 51052870 51052923 -21100959 - MIR SINE MIR -138 124 76 688 264 78 13 chr20 51053500 51053731 -21100151 + MER113 DNA MER1_type? 141 386 -135 2125 138 0 0 chr20 51053939 51054237 -21099645 - AluSx SINE Alu -14 298 1 356 306 82 49 chr20 51054265 51054448 -21099434 - L1MC4 LINE L1 -1322 6720 6532 356 322 94 42 chr20 51054450 51054933 -21098949 - L1M4 LINE L1 -3436 2710 2117 317 213 0 75 chr20 51054902 51054982 -21098900 + L1MCa LINE L1 1995 2068 -4358 * 332 264 23 23 chr20 51054943 51055030 -21098852 - L1MC4 LINE L1 -1339 6703 6617 * 360 315 0 0 chr20 51054999 51055088 -21098794 - L1MC4 LINE L1 -1339 6703 6615 1912 133 35 3 chr20 51055088 51055374 -21098508 - AluJo SINE Alu -17 295 1 433 257 92 0 chr20 51055375 51055527 -21098355 - L2 LINE L2 -596 2718 2553 267 31 0 0 chr20 51055544 51055576 -21098306 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 1258 236 183 27 chr20 51055618 51055872 -21098010 - L2 LINE L2 -477 2837 2624 2520 190 45 80 chr20 51055872 51056448 -21097434 + MLT1E3 LTR MaLR 1 553 -71 2313 113 3 0 chr20 51056448 51056749 -21097133 - AluSq SINE Alu -11 302 1 2520 190 45 80 chr20 51056749 51056819 -21097063 + MLT1E3 LTR MaLR 553 624 0 1258 236 183 27 chr20 51056819 51057111 -21096771 - L2 LINE L2 -690 2624 2206 1630 178 3 33 chr20 51057121 51057425 -21096457 + AluJo SINE Alu 1 295 -17 1459 201 32 30 chr20 51057427 51057486 -21096396 + L1ME1 LINE L1 5789 5846 -320 1986 132 24 7 chr20 51057486 51057781 -21096101 + AluSx SINE Alu 3 302 -10 1459 201 32 30 chr20 51057781 51058090 -21095792 + L1ME1 LINE L1 5846 6158 -8 2293 105 0 10 chr20 51058092 51058397 -21095485 + AluSx SINE Alu 1 302 -10 1813 136 3 71 chr20 51058569 51058892 -21094990 + AluJo SINE Alu 1 301 -11 1703 198 7 0 chr20 51059586 51059879 -21094003 - AluJo SINE Alu -17 295 1 2341 202 60 60 chr20 51059899 51060259 -21093623 + HsTC2a DNA Tc2 14 373 -1527 2596 74 0 0 chr20 51060259 51060569 -21093313 + AluY SINE Alu 1 310 -1 2341 202 60 60 chr20 51060569 51060758 -21093124 + HsTC2a DNA Tc2 373 561 -1339 2244 132 0 0 chr20 51060758 51061053 -21092829 - AluSx SINE Alu -16 296 2 2014 111 21 10 chr20 51061055 51061343 -21092539 - AluSg SINE Alu -19 291 1 2341 202 60 60 chr20 51061343 51061501 -21092381 + HsTC2a DNA Tc2 561 725 -19 243 77 26 26 chr20 51061510 51061549 -21092333 - MIR SINE MIR -113 149 111 2086 123 0 20 chr20 51061757 51062059 -21091823 + AluSx SINE Alu 7 302 -10 322 208 122 9 chr20 51062241 51062352 -21091530 - MIR SINE MIR -60 148 20 742 298 67 0 chr20 51062617 51062947 -21090935 + L2 LINE L2 2712 3058 -255 836 233 22 0 chr20 51062952 51063132 -21090750 - MER58A DNA MER1_type -38 186 3 246 261 54 33 chr20 51063139 51063231 -21090651 + L2 LINE L2 3150 3243 -70 2518 205 44 4 chr20 51063232 51063753 -21090129 + MLT1F LTR MaLR 1 542 0 217 197 33 49 chr20 51063756 51063817 -21090065 + L2 LINE L2 3254 3313 0 31 92 0 0 chr20 51063907 51063994 -21089888 + AT_rich Low_complexity Low_complexity 1 87 0 200 269 0 19 chr20 51064034 51064086 -21089796 + L3 LINE CR1 1523 1573 -4 583 287 63 83 chr20 51064206 51064909 -21088973 - L2 LINE L2 0 3272 2572 2116 131 0 7 chr20 51065027 51065332 -21088550 + AluSx SINE Alu 1 303 -9 203 368 26 13 chr20 51065433 51065509 -21088373 + MIR SINE MIR 108 184 -78 2155 116 0 0 chr20 51066160 51066472 -21087410 + AluSx SINE Alu 1 312 0 181 352 55 21 chr20 51066905 51067050 -21086832 + L2 LINE L2 2909 3058 -214 707 274 133 18 chr20 51067094 51067426 -21086456 + LTR33 LTR ERVL 31 400 -121 878 180 85 0 chr20 51067466 51067655 -21086227 + MER20 DNA MER1_type 1 205 -14 192 164 119 60 chr20 51067781 51067848 -21086034 - L2 LINE L2 -62 3210 3140 2063 98 0 51 chr20 51067989 51068284 -21085598 + AluSx SINE Alu 1 280 -32 329 277 80 0 chr20 51068485 51068597 -21085285 + MIR SINE MIR 128 248 -14 206 196 219 0 chr20 51068660 51068733 -21085149 + MIR SINE MIR 64 151 -62 550 202 26 26 chr20 51068894 51069008 -21084874 - MER81 DNA DNA 0 114 1 780 230 109 42 chr20 51069053 51069064 -21084818 - MIR SINE MIR -3 259 250 2066 124 0 0 chr20 51069064 51069372 -21084510 + AluSx SINE Alu 2 309 0 780 230 109 42 chr20 51069372 51069598 -21084284 - MIR SINE MIR -12 250 5 2090 138 0 13 chr20 51069610 51069914 -21083968 - AluSx SINE Alu -11 301 2 210 118 0 0 chr20 51069945 51069979 -21083903 + (TAA)n Simple_repeat Simple_repeat 1 34 0 342 246 159 59 chr20 51070173 51070432 -21083450 - MER102a DNA MER1_type -10 320 29 2627 18 0 0 chr20 51070535 51070847 -21083035 + AluYa5 SINE Alu 1 312 0 1336 205 75 40 chr20 51070856 51071206 -21082676 + L1ME3A LINE L1 5773 6138 -32 1626 148 28 60 chr20 51071206 51071523 -21082359 - AluJb SINE Alu -5 307 1 1336 205 75 40 chr20 51071523 51071543 -21082339 + L1ME3A LINE L1 6138 6156 -14 346 127 0 0 chr20 51071734 51071797 -21082085 + Alu SINE Alu 239 301 -1 2223 122 3 3 chr20 51071931 51072243 -21081639 - AluSx SINE Alu 0 312 1 282 197 333 17 chr20 51072244 51072361 -21081521 + L2 LINE L2 3159 3312 -1 347 252 99 0 chr20 51072495 51072606 -21081276 - MIR SINE MIR -112 150 29 403 241 0 62 chr20 51072646 51072680 -21081202 - MIR SINE MIR -95 167 132 1743 159 10 36 chr20 51072680 51072988 -21080894 + AluJo SINE Alu 1 300 -12 2288 88 3 0 chr20 51072998 51073310 -21080572 + AluSp SINE Alu 1 313 0 403 241 0 62 chr20 51073310 51073375 -21080507 - MIR SINE MIR -139 123 63 2372 106 0 0 chr20 51073954 51074256 -21079626 + AluSx SINE Alu 1 302 -10 191 292 21 0 chr20 51074386 51074434 -21079448 - L2 LINE L2 -1 3312 3264 541 291 82 41 chr20 51074798 51075042 -21078840 + MIR SINE MIR 3 256 -6 295 205 72 0 chr20 51075109 51075192 -21078690 + L1MC4 LINE L1 6615 6703 -1339 216 216 0 0 chr20 51075192 51075243 -21078639 + (CATA)n Simple_repeat Simple_repeat 4 54 0 1636 160 87 4 chr20 51075311 51075586 -21078296 + AluJb SINE Alu 1 298 -14 290 255 157 10 chr20 51075586 51075688 -21078194 + L2 LINE L2 3197 3313 0 285 311 0 29 chr20 51075719 51075822 -21078060 + MIR SINE MIR 63 162 -100 * 729 234 80 29 chr20 51075813 51076052 -21077830 - MIR SINE MIR -10 252 2 870 231 98 53 chr20 51076074 51076155 -21077727 + L1ME3 LINE L1 5746 5822 -340 852 172 0 8 chr20 51076155 51076289 -21077593 + FLAM_C SINE Alu 1 133 0 870 231 98 53 chr20 51076289 51076328 -21077554 + L1ME3 LINE L1 5822 5858 -304 2275 99 0 48 chr20 51076328 51076641 -21077241 + AluSg SINE Alu 2 299 -11 870 231 98 53 chr20 51076641 51076918 -21076964 + L1ME3 LINE L1 5858 6162 0 1577 158 119 4 chr20 51076926 51077186 -21076696 + AluJb SINE Alu 1 290 -12 358 276 33 30 chr20 51077190 51077337 -21076545 - L1MC4 LINE L1 -1339 6703 6576 1106 138 60 0 chr20 51077681 51077848 -21076034 + 7SLRNA srpRNA srpRNA 137 313 -7 279 233 0 14 chr20 51078164 51078237 -21075645 - L1ME4a LINE L1 -214 5907 5836 785 272 49 29 chr20 51078311 51078554 -21075328 - MIR SINE MIR 0 262 15 2066 125 48 0 chr20 51078850 51079139 -21074743 + AluSx SINE Alu 2 304 -8 738 204 124 163 chr20 51079144 51079431 -21074451 - L1ME1 LINE L1 -6 6160 5863 1716 123 90 7 chr20 51079431 51079708 -21074174 - AluSx SINE Alu -11 301 2 738 204 124 163 chr20 51079708 51079768 -21074114 - L1ME1 LINE L1 -303 5863 5802 394 57 0 0 chr20 51079768 51079821 -21074061 + MADE1 DNA Mariner 28 80 0 738 204 124 163 chr20 51079821 51079838 -21074044 - L1ME1 LINE L1 -364 5802 5786 1671 141 80 14 chr20 51079838 51080114 -21073768 + AluJb SINE Alu 7 300 -12 738 204 124 163 chr20 51080114 51080314 -21073568 - L1ME1 LINE L1 -380 5786 5566 412 243 18 95 chr20 51080382 51080435 -21073447 + MIR SINE MIR 99 154 -108 2422 83 0 0 chr20 51080435 51080724 -21073158 + AluSc SINE Alu 1 289 -20 412 243 18 95 chr20 51080724 51080839 -21073043 + MIR SINE MIR 154 254 -8 2055 99 78 0 chr20 51080840 51081123 -21072759 - AluSx SINE Alu -7 305 1 543 261 100 22 chr20 51081277 51081457 -21072425 - MIR SINE MIR -32 230 37 502 201 103 63 chr20 51081552 51081879 -21072003 - LTR16A1 LTR ERVL -13 444 34 496 315 52 19 chr20 51083588 51083801 -21070081 + MIR SINE MIR 35 254 -8 475 279 93 22 chr20 51084451 51084634 -21069248 + MIR SINE MIR 67 262 0 634 226 157 60 chr20 51084678 51084743 -21069139 + MIR SINE MIR 5 62 -200 1937 123 0 11 chr20 51084743 51085054 -21068828 + AluSx SINE Alu 1 308 0 634 226 157 60 chr20 51085054 51085222 -21068660 + MIR SINE MIR 62 262 0 222 244 0 0 chr20 51085415 51085460 -21068422 + (CATATA)n Simple_repeat Simple_repeat 4 48 0 301 225 35 115 chr20 51085487 51085552 -21068330 - L1ME2 LINE L1 0 6170 6101 1656 164 0 33 chr20 51085552 51085856 -21068026 + AluJb SINE Alu 1 294 -18 301 225 35 115 chr20 51085856 51086019 -21067863 - L1ME2 LINE L1 -69 6101 5961 1863 118 29 13 chr20 51086094 51086400 -21067482 - AluSx SINE Alu -1 311 1 866 235 77 58 chr20 51086400 51086779 -21067103 - L1MC5 LINE L1 -936 6872 6564 351 163 88 25 chr20 51087332 51087412 -21066470 - MIR SINE MIR -64 144 60 2043 127 0 0 chr20 51087543 51087842 -21066040 - AluSx SINE Alu -13 299 1 321 299 65 9 chr20 51087941 51088048 -21065834 - MIR SINE MIR -121 141 29 898 251 9 32 chr20 51088065 51088284 -21065598 + MER20 DNA MER1_type 1 214 -5 2069 126 3 0 chr20 51088326 51088636 -21065246 + AluSx SINE Alu 1 311 -1 2060 111 3 7 chr20 51088941 51089239 -21064643 - AluSx SINE Alu -15 297 1 293 363 26 0 chr20 51089383 51089496 -21064386 + MIR3 SINE MIR 55 170 -38 339 279 91 51 chr20 51089511 51089595 -21064287 + MIR SINE MIR 28 107 -155 1987 117 3 0 chr20 51089595 51089910 -21063972 - AluSx SINE Alu 0 316 1 339 279 91 51 chr20 51089910 51090021 -21063861 + MIR SINE MIR 107 232 -30 1176 106 82 0 chr20 51090401 51090571 -21063311 - AluSq SINE Alu -129 184 1 1905 96 0 93 chr20 51090582 51090904 -21062978 - AluSx SINE Alu -20 292 1 1860 180 122 10 chr20 51090904 51091299 -21062583 + MLT1D LTR MaLR 67 505 0 487 157 24 167 chr20 51091300 51091510 -21062372 + MER53 DNA DNA 9 188 -1 245 284 54 0 chr20 51091907 51091981 -21061901 - MIR SINE MIR -64 144 67 203 153 14 0 chr20 51092220 51092261 -21061621 + MIR SINE MIR 104 144 -118 187 269 65 43 chr20 51092950 51093043 -21060839 + MIR SINE MIR 16 110 -152 316 240 27 0 chr20 51093076 51093151 -21060731 - L2 LINE L2 -50 3263 3187 376 268 71 9 chr20 51093163 51093275 -21060607 + MIR SINE MIR 126 244 -18 510 201 45 52 chr20 51093281 51093415 -21060467 + L2 LINE L2 3178 3310 -3 204 244 126 34 chr20 51093510 51093629 -21060253 - L2 LINE L2 -206 3066 2937 495 264 258 0 chr20 51093859 51094041 -21059841 - L2 LINE L2 -6 3266 3038 * 616 180 74 0 chr20 51094038 51094160 -21059722 + L2 LINE L2 2579 2709 -605 2004 124 0 0 chr20 51094162 51094495 -21059387 - AluSx SINE Alu 0 333 1 1140 113 19 0 chr20 51094499 51094659 -21059223 + AluJo SINE Alu 120 282 -30 812 259 185 42 chr20 51094676 51095081 -21058801 - LTR16B LTR ERVL 0 464 2 849 238 209 27 chr20 51095266 51095330 -21058552 - L1MC4a LINE L1 -1904 5904 5853 2247 77 7 0 chr20 51095330 51095629 -21058253 - AluY SINE Alu -10 301 1 849 238 209 27 chr20 51095629 51095940 -21057942 - L1MC4a LINE L1 -1955 5853 5431 1654 97 120 0 chr20 51095940 51096198 -21057684 - AluSx SINE Alu -1 311 23 849 238 209 27 chr20 51096198 51096271 -21057611 - L1MC4a LINE L1 -2377 5431 5373 226 274 35 53 chr20 51097093 51097206 -21056676 - LTR67 LTR ERVL -6 551 441 853 152 0 0 chr20 51097804 51097936 -21055946 + FLAM_C SINE Alu 2 133 -10 2026 95 0 83 chr20 51098806 51099132 -21054750 + AluSg SINE Alu 1 299 -11 948 275 145 41 chr20 51099387 51099407 -21054475 - MLT1K LTR MaLR 0 588 571 2164 110 0 0 chr20 51099407 51099698 -21054184 - AluSx SINE Alu -21 291 1 948 275 145 41 chr20 51099698 51100208 -21053674 - MLT1K LTR MaLR -17 571 3 510 169 102 114 chr20 51100211 51100342 -21053540 - MIR SINE MIR -98 164 34 1708 150 27 10 chr20 51100342 51100635 -21053247 - AluJb SINE Alu -14 298 1 510 169 102 114 chr20 51100635 51100669 -21053213 - MIR SINE MIR -228 34 1 2195 106 3 0 chr20 51101372 51101675 -21052207 + AluSq SINE Alu 1 304 -9 215 312 24 80 chr20 51101864 51101989 -21051893 - MIR SINE MIR -51 211 94 383 284 14 34 chr20 51102322 51102470 -21051412 - MER103 DNA DNA -10 156 12 2058 119 3 3 chr20 51102627 51102922 -21050960 - AluSx SINE Alu -17 295 1 866 184 4 133 chr20 51103482 51103543 -21050339 + AluJo SINE Alu 89 156 -156 2136 86 14 3 chr20 51103543 51103833 -21050049 + AluSx SINE Alu 5 297 -15 866 184 4 133 chr20 51103833 51104004 -21049878 + AluJo SINE Alu 156 291 -21 2255 88 0 0 chr20 51104314 51104609 -21049273 - AluSx SINE Alu -17 295 1 311 315 110 24 chr20 51104662 51104789 -21049093 - MER5B DNA MER1_type -39 139 2 1116 254 197 19 chr20 51104943 51105694 -21048188 - L2 LINE L2 -1 3312 2409 231 125 0 25 chr20 51105700 51105740 -21048142 - L2 LINE L2 -1 3312 3274 229 293 49 12 chr20 51106911 51106993 -21046889 + MIR3 SINE MIR 115 199 -9 2284 89 0 0 chr20 51107337 51107641 -21046241 + AluSg SINE Alu 1 304 -6 2077 106 7 3 chr20 51109542 51109835 -21044047 + AluSq SINE Alu 1 294 -19 1919 131 0 14 chr20 51110293 51110590 -21043292 + AluSx SINE Alu 1 293 -19 268 269 0 15 chr20 51111560 51111627 -21042255 - MIR SINE MIR -159 103 38 313 276 104 37 chr20 51112626 51112760 -21041122 + MIR SINE MIR 28 170 -92 2149 114 0 0 chr20 51113053 51113351 -21040531 + AluSx SINE Alu 1 298 -14 321 42 146 0 chr20 51113351 51113399 -21040483 + HY3 scRNA scRNA 44 98 -3 320 224 75 0 chr20 51114602 51114669 -21039213 - MIR SINE MIR -178 84 13 2301 73 0 16 chr20 51114834 51115148 -21038734 + AluY SINE Alu 1 309 -2 503 308 111 57 chr20 51115425 51115759 -21038123 + L2 LINE L2 2916 3267 -5 300 314 138 63 chr20 51118044 51118407 -21035475 + L2 LINE L2 2883 3272 0 1695 196 75 21 chr20 51118427 51118846 -21035036 + L1M4 LINE L1 3878 4322 -1824 1588 188 13 7 chr20 51118846 51119154 -21034728 + AluJo SINE Alu 1 310 -2 1366 189 59 0 chr20 51119163 51119433 -21034449 - AluJo SINE Alu -21 291 6 1618 145 26 113 chr20 51119438 51119907 -21033975 + L1M4 LINE L1 4320 4747 -1399 2057 121 0 0 chr20 51119907 51120196 -21033686 + AluSx SINE Alu 1 289 -23 244 299 149 22 chr20 51121716 51121850 -21032032 + MIR3 SINE MIR 55 205 -3 2096 89 20 3 chr20 51121864 51122157 -21031725 - AluSq SINE Alu -10 303 6 1938 100 4 11 chr20 51122162 51122442 -21031440 - AluSq SINE Alu -35 278 1 1785 117 73 0 chr20 51122568 51122842 -21031040 + AluSq SINE Alu 9 302 -11 2186 90 20 0 chr20 51122853 51123152 -21030730 + AluSg1 SINE Alu 1 305 -4 1707 174 7 0 chr20 51124130 51124428 -21029454 + AluJb SINE Alu 1 300 -12 1575 130 46 87 chr20 51124743 51125066 -21028816 + AluJb SINE Alu 1 310 -2 309 208 26 13 chr20 51125076 51125153 -21028729 + L1ME LINE L1 5729 5806 -315 531 192 48 10 chr20 51125531 51125635 -21028247 + L1ME LINE L1 5572 5679 -442 1313 184 11 40 chr20 51126052 51126330 -21027552 - AluJo SINE Alu -1 311 42 1991 104 7 0 chr20 51127073 51127353 -21026529 + AluSg1 SINE Alu 1 282 -27 2072 113 0 0 chr20 51127451 51127755 -21026127 - AluSx SINE Alu 0 304 1 489 253 40 33 chr20 51128374 51128524 -21025358 + MIR SINE MIR 4 154 -108 2228 102 0 0 chr20 51128572 51128885 -21024997 + AluSq SINE Alu 1 313 0 2026 114 0 7 chr20 51129745 51130034 -21023848 + AluSg SINE Alu 1 287 -23 337 276 270 15 chr20 51130712 51130908 -21022974 + MIR SINE MIR 13 258 -4 2427 64 0 6 chr20 51131020 51131331 -21022551 + AluY SINE Alu 2 310 -1 2059 159 110 67 chr20 51131402 51131613 -21022269 + L1MB5 LINE L1 5585 5785 -389 2146 121 0 0 chr20 51131613 51131894 -21021988 + AluSx SINE Alu 1 281 -31 2059 159 110 67 chr20 51131894 51132192 -21021690 + L1MB5 LINE L1 5785 6122 -52 1870 151 10 16 chr20 51132192 51132496 -21021386 - AluSx SINE Alu -10 302 1 2059 159 110 67 chr20 51132496 51132540 -21021342 + L1MB5 LINE L1 6122 6163 -11 2302 93 0 0 chr20 51132563 51132852 -21021030 + AluSg SINE Alu 1 289 -21 2030 116 32 29 chr20 51132922 51133233 -21020649 - AluSx SINE Alu 0 312 1 897 163 62 19 chr20 51133233 51133393 -21020489 - FRAM SINE Alu -12 164 1 318 209 40 74 chr20 51133640 51133788 -21020094 + MIR SINE MIR 120 262 0 2280 165 58 19 chr20 51133877 51134308 -21019574 + MLT1C LTR MaLR 18 465 -2 861 214 33 45 chr20 51134424 51134667 -21019215 + L2 LINE L2 2375 2614 -700 1002 102 15 0 chr20 51134721 51134858 -21019024 + AluSq/x SINE Alu 1 139 -173 204 40 0 0 chr20 51134860 51134885 -21018997 + (A)n Simple_repeat Simple_repeat 1 25 0 2364 98 3 7 chr20 51135224 51135530 -21018352 + AluSp SINE Alu 1 305 -8 267 200 62 38 chr20 51135612 51135692 -21018190 + MER34 LTR ERV1 461 542 0 397 269 15 22 chr20 51135692 51135826 -21018056 + L2 LINE L2 2641 2773 -541 577 44 66 55 chr20 51135826 51135917 -21017965 + AluY SINE Alu 1 92 -219 949 144 62 25 chr20 51136190 51136350 -21017532 + FRAM SINE Alu 1 165 -11 1381 216 117 7 chr20 51136380 51136699 -21017183 + MER21B LTR ERV1 1 445 -486 1067 110 86 6 chr20 51136706 51136869 -21017013 + AluSg/x SINE Alu 70 245 -65 1509 228 58 58 chr20 51136869 51136958 -21016924 + MER21B LTR ERV1 376 464 -399 1997 155 6 9 chr20 51136958 51137306 -21016576 + L1PA16 LINE L1 5806 6152 -14 1509 228 58 58 chr20 51137306 51137629 -21016253 + MER21B LTR ERV1 463 788 -75 185 337 32 21 chr20 51138950 51139045 -21014837 - L2 LINE L2 -189 3083 2988 597 268 147 48 chr20 51139062 51139499 -21014383 - MER113 DNA MER1_type? -4 517 38 384 233 90 15 chr20 51139523 51139656 -21014226 - LTR48 LTR ERV1 -481 306 164 1275 262 101 44 chr20 51140021 51140317 -21013565 - MER90 LTR ERV1 -23 591 256 4209 85 22 4 chr20 51140317 51140869 -21013013 + LTR6A LTR ERV1 1 562 -2 1275 262 101 44 chr20 51140869 51141049 -21012833 - MER90 LTR ERV1 -358 256 88 257 260 299 0 chr20 51141178 51141305 -21012577 - L3 LINE CR1 -31 1546 1382 2670 82 99 5 chr20 51141307 51141712 -21012170 + LTR7 LTR ERV1 1 443 -7 2062 74 0 16 chr20 51141901 51142159 -21011723 - AluSx SINE Alu -8 304 51 726 307 93 24 chr20 51142179 51142413 -21011469 - L2 LINE L2 0 3313 3042 2185 138 0 0 chr20 51142413 51142725 -21011157 - AluSx SINE Alu 0 312 1 726 307 93 24 chr20 51142725 51142865 -21011017 - L2 LINE L2 -271 3042 2913 2217 81 115 29 chr20 51142865 51143106 -21010776 + MER51B LTR ERV1 1 282 -95 2242 89 0 0 chr20 51143106 51143387 -21010495 - AluSg SINE Alu -29 281 1 2217 81 115 29 chr20 51143387 51143492 -21010390 + MER51B LTR ERV1 282 377 0 382 364 0 6 chr20 51143495 51143657 -21010225 - L2 LINE L2 -452 2862 2702 2338 90 3 0 chr20 51143716 51144015 -21009867 - AluSc SINE Alu -9 300 1 251 118 17 193 chr20 51144019 51144138 -21009744 - L2 LINE L2 -604 2710 2613 4817 85 27 33 chr20 51144146 51144670 -21009212 + LTR8 LTR ERV1 1 523 -168 1803 124 21 21 chr20 51144670 51144976 -21008906 + AluSx SINE Alu 1 306 0 4817 85 27 33 chr20 51144976 51145145 -21008737 + LTR8 LTR ERV1 523 691 0 229 254 0 0 chr20 51145226 51145281 -21008601 - L1MC/D LINE L1 -2009 5799 5745 2194 102 0 3 chr20 51145281 51145575 -21008307 - AluSc SINE Alu -16 293 1 1703 154 0 15 chr20 51145575 51145846 -21008036 - AluJb SINE Alu -14 298 31 1810 194 64 113 chr20 51145846 51146088 -21007794 - LTR8 LTR ERV1 -4 687 434 2529 68 0 3 chr20 51146088 51146397 -21007485 + AluY SINE Alu 2 309 -2 1810 194 64 113 chr20 51146397 51146580 -21007302 - LTR8 LTR ERV1 -257 434 243 2211 123 3 0 chr20 51146580 51146881 -21007001 + AluSx SINE Alu 1 302 -10 1810 194 64 113 chr20 51146881 51147062 -21006820 - LTR8 LTR ERV1 -448 243 119 2087 90 87 3 chr20 51147062 51147351 -21006531 + AluSp SINE Alu 1 313 0 1810 194 64 113 chr20 51147351 51147465 -21006417 - LTR8 LTR ERV1 -572 119 1 2187 119 3 0 chr20 51147793 51148104 -21005778 + AluSx SINE Alu 1 312 0 318 252 16 57 chr20 51148825 51148948 -21004934 + MIR SINE MIR 72 189 -73 228 315 48 40 chr20 51149360 51149633 -21004249 - L2 LINE L2 -352 2962 2688 800 169 0 0 chr20 51149746 51149870 -21004012 - FLAM_A SINE Alu -9 124 1 351 208 175 25 chr20 51149872 51149992 -21003890 - L2 LINE L2 -8 3305 3168 301 274 131 91 chr20 51150304 51150830 -21003052 - L2 LINE L2 -1241 2073 1527 347 269 166 58 chr20 51150960 51151011 -21002871 - MIR SINE MIR -4 258 214 2152 134 0 0 chr20 51151011 51151310 -21002572 - AluSx SINE Alu -13 299 1 347 269 166 58 chr20 51151310 51151481 -21002401 - MIR SINE MIR -48 214 12 2186 127 0 0 chr20 51151900 51152191 -21001691 + AluSq SINE Alu 1 291 -22 2450 135 22 33 chr20 51152362 51152822 -21001060 - L1MB2 LINE L1 -30 6141 5687 241 211 133 11 chr20 51152841 51152931 -21000951 + L1ME4a LINE L1 6021 6121 0 2267 95 6 22 chr20 51153454 51153638 -21000244 - AluSx SINE Alu 0 312 134 2259 108 7 0 chr20 51153638 51153943 -20999939 - AluSp SINE Alu -5 308 2 2267 95 6 22 chr20 51153943 51154075 -20999807 - AluSx SINE Alu -178 134 1 2115 118 3 30 chr20 51154123 51154427 -20999455 - AluSx SINE Alu -16 296 1 26 0 0 0 chr20 51154527 51154553 -20999329 + AT_rich Low_complexity Low_complexity 1 26 0 333 296 83 8 chr20 51154824 51154956 -20998926 - MIR SINE MIR -74 188 47 813 215 34 133 chr20 51154982 51155340 -20998542 - L1MC5 LINE L1 -37 7924 7532 594 260 0 0 chr20 51155340 51155463 -20998419 - FLAM_A SINE Alu -10 123 1 2082 121 0 35 chr20 51155463 51155777 -20998105 - AluSx SINE Alu -9 303 1 813 215 34 133 chr20 51155777 51155873 -20998009 - L1MC5 LINE L1 -428 7533 7536 852 70 330 87 chr20 51155873 51155953 -20997929 - MER30 DNA MER1_type 0 230 171 2411 88 7 0 chr20 51155953 51156260 -20997622 - AluSq SINE Alu -4 309 1 852 70 330 87 chr20 51156260 51156364 -20997518 - MER30 DNA MER1_type -59 171 1 813 215 34 133 chr20 51156364 51156492 -20997390 - L1MC5 LINE L1 -424 7537 7398 2227 114 0 10 chr20 51156494 51156802 -20997080 - AluSx SINE Alu -7 305 1 2117 124 3 34 chr20 51157100 51157423 -20996459 - AluSq SINE Alu 0 313 1 1224 193 0 5 chr20 51157824 51158047 -20995835 - AluJo SINE Alu -7 305 84 2209 108 17 0 chr20 51158234 51158530 -20995352 - AluSq SINE Alu -12 301 1 230 163 184 0 chr20 51158759 51158808 -20995074 + MIR SINE MIR 86 143 -65 2186 100 0 44 chr20 51159113 51159433 -20994449 - AluSx SINE Alu -5 307 2 398 249 139 42 chr20 51159574 51159811 -20994071 + MIR SINE MIR 2 261 -1 488 283 115 31 chr20 51160168 51160311 -20993571 - MLT1L LTR MaLR -159 456 326 2355 80 0 38 chr20 51160311 51160624 -20993258 + AluSq SINE Alu 1 301 -12 488 283 115 31 chr20 51160624 51160766 -20993116 - MLT1L LTR MaLR -289 326 147 628 279 70 43 chr20 51160920 51161221 -20992661 - MLT1J LTR MaLR -47 464 156 2308 124 0 0 chr20 51161422 51161774 -20992108 - AluSx SINE Alu 0 355 4 1685 158 29 15 chr20 51162092 51162365 -20991517 + AluJo SINE Alu 11 287 -25 1842 157 3 10 chr20 51162509 51162802 -20991080 + AluJb SINE Alu 3 293 -19 2068 143 0 16 chr20 51163082 51163396 -20990486 - AluSx SINE Alu -3 309 1 403 164 10 58 chr20 51163818 51163922 -20989960 - L1MC5 LINE L1 -52 7909 7811 299 250 12 12 chr20 51164041 51164125 -20989757 + MIR SINE MIR 157 240 -22 330 250 65 11 chr20 51164189 51164281 -20989601 + MIR SINE MIR 64 160 -102 664 155 0 0 chr20 51164295 51164398 -20989484 + AluSq/x SINE Alu 2 104 -208 2126 118 7 16 chr20 51164436 51164741 -20989141 + AluSx SINE Alu 1 302 -10 450 0 0 0 chr20 51165396 51165446 -20988436 + (CA)n Simple_repeat Simple_repeat 1 50 0 1792 173 3 3 chr20 51166084 51166379 -20987503 + AluJb SINE Alu 1 295 -17 263 263 13 0 chr20 51166651 51166727 -20987155 - MIR SINE MIR -10 252 176 2940 73 9 52 chr20 51166749 51167189 -20986693 - HSMAR2 DNA Mariner -2 1300 880 627 188 0 30 chr20 51167214 51167347 -20986535 - MIR SINE MIR -64 198 70 383 241 118 48 chr20 51167401 51167588 -20986294 - L1MC4 LINE L1 0 8042 7843 715 273 77 60 chr20 51167588 51167604 -20986278 - MER20B DNA MER1_type -411 372 358 2313 62 31 3 chr20 51167604 51167895 -20985987 - AluY SINE Alu -12 299 1 715 273 77 60 chr20 51167895 51168244 -20985638 - MER20B DNA MER1_type -425 358 1 454 256 115 26 chr20 51169127 51169318 -20984564 + MIR SINE MIR 54 261 -1 322 300 109 0 chr20 51170140 51170250 -20983632 - L2 LINE L2 -3 3310 3189 1999 128 3 36 chr20 51170618 51170923 -20982959 - AluSx SINE Alu -17 295 1 225 132 408 13 chr20 51170930 51171006 -20982876 - L1ME2 LINE L1 0 6164 6059 221 246 18 0 chr20 51171624 51171681 -20982201 + (TTG)n Simple_repeat Simple_repeat 2 59 0 2141 101 0 14 chr20 51172364 51172680 -20981202 - AluSc SINE Alu 0 312 1 2396 95 0 0 chr20 51172898 51173204 -20980678 - AluSx SINE Alu -6 306 1 1860 121 20 10 chr20 51173783 51174080 -20979802 + AluSx SINE Alu 1 300 -12 2256 109 0 13 chr20 51174080 51174392 -20979490 + AluY SINE Alu 1 308 -3 205 171 0 0 chr20 51174747 51174782 -20979100 + (TAG)n Simple_repeat Simple_repeat 3 37 0 347 281 11 0 chr20 51174808 51174897 -20978985 - MIR SINE MIR -56 206 117 925 95 30 12 chr20 51175097 51175266 -20978616 + CT-rich Low_complexity Low_complexity 1 172 0 1064 171 17 0 chr20 51175285 51175461 -20978421 - AluJb SINE Alu -1 311 133 25 51 0 0 chr20 51175642 51175681 -20978201 + AT_rich Low_complexity Low_complexity 1 39 0 519 245 51 60 chr20 51176244 51176460 -20977422 - L1MC/D LINE L1 -2006 5802 5589 1226 156 6 144 chr20 51176465 51176825 -20977057 + AluJb SINE Alu 2 316 0 621 292 58 62 chr20 51177301 51177597 -20976285 + L1MEd LINE L1 569 864 -5255 2273 99 0 3 chr20 51177597 51177889 -20975993 + AluSg SINE Alu 1 291 -19 621 292 58 62 chr20 51177889 51178160 -20975722 + L1MEd LINE L1 864 1134 -4985 608 223 33 0 chr20 51178175 51178296 -20975586 - FAM SINE Alu -37 148 24 340 268 24 39 chr20 51178300 51178427 -20975455 + L1MEd LINE L1 1108 1232 -4887 354 251 17 91 chr20 51178507 51178549 -20975333 + L1MEd LINE L1 3064 3108 -3021 608 179 60 67 chr20 51178549 51178683 -20975199 + FLAM_A SINE Alu 1 133 0 354 251 17 91 chr20 51178683 51178884 -20974998 + L1MEd LINE L1 3108 3276 -2853 1819 132 34 20 chr20 51178884 51179179 -20974703 + AluJb SINE Alu 14 312 0 354 251 17 91 chr20 51179179 51179284 -20974598 + L1MEd LINE L1 3276 3387 -2742 2040 119 32 0 chr20 51179320 51179605 -20974277 + AluSx SINE Alu 3 296 -16 639 230 51 28 chr20 51179856 51180034 -20973848 - MLT1G LTR MaLR 0 590 409 2044 155 0 3 chr20 51180068 51180372 -20973510 - AluJo SINE Alu -9 303 1 546 172 35 17 chr20 51181111 51181227 -20972655 - FLAM_A SINE Alu -6 136 19 271 265 15 0 chr20 51181731 51181799 -20972083 - L2 LINE L2 -18 3254 3186 303 243 14 0 chr20 51181890 51181960 -20971922 - LTR67 LTR ERVL 0 557 487 2249 104 3 0 chr20 51182306 51182603 -20971279 - AluSx SINE Alu -14 298 1 1148 186 44 15 chr20 51182672 51182876 -20971006 + MER58A DNA MER1_type 1 210 -14 2010 141 7 0 chr20 51183105 51183409 -20970473 + AluSx SINE Alu 1 306 -6 384 269 8 25 chr20 51183565 51183684 -20970198 - LTR67 LTR ERVL -3 554 438 221 214 14 43 chr20 51183993 51184063 -20969819 + CT-rich Low_complexity Low_complexity 5 72 0 1652 143 22 4 chr20 51184425 51184698 -20969184 + AluJb SINE Alu 21 298 -14 929 245 115 67 chr20 51184800 51185014 -20968868 - L1ME4a LINE L1 -2 6119 5917 1796 123 58 0 chr20 51185014 51185290 -20968592 - AluSg SINE Alu -18 292 1 929 245 115 67 chr20 51185290 51185558 -20968324 - L1ME4a LINE L1 -204 5917 5604 462 179 0 0 chr20 51185558 51185642 -20968240 - L1MC2 LINE L1 -9 6335 6252 929 245 115 67 chr20 51185642 51185714 -20968168 - L1ME4a LINE L1 -517 5604 5537 1083 107 0 0 chr20 51186135 51186294 -20967588 - AluSp/q SINE Alu 0 313 155 1543 185 3 11 chr20 51186388 51186675 -20967207 + AluJo SINE Alu 1 285 -27 324 273 154 21 chr20 51186993 51187136 -20966746 + MIR SINE MIR 14 175 -87 432 315 73 59 chr20 51187137 51187426 -20966456 - L2 LINE L2 -16 3297 3005 1940 99 15 0 chr20 51187493 51187765 -20966117 + AluSx SINE Alu 1 276 -36 246 62 0 0 chr20 51187766 51187798 -20966084 + (TAA)n Simple_repeat Simple_repeat 2 33 0 2145 103 0 7 chr20 51188545 51188847 -20965035 - AluSx SINE Alu -12 300 1 23 68 0 0 chr20 51188904 51188948 -20964934 + AT_rich Low_complexity Low_complexity 1 44 0 302 296 10 31 chr20 51189985 51190083 -20963799 + MIR SINE MIR 90 185 -77 522 265 115 30 chr20 51190152 51190352 -20963530 + MIR SINE MIR 46 262 0 367 234 228 41 chr20 51190493 51190664 -20963218 - HAL1 LINE L1 -10 2497 2295 484 246 5 109 chr20 51190667 51190878 -20963004 - HAL1 LINE L1 0 2507 2319 790 169 128 99 chr20 51190885 51191110 -20962772 - L1MC5 LINE L1 -27 7934 7692 1929 126 33 0 chr20 51191110 51191411 -20962471 - AluSx SINE Alu -1 311 1 790 169 128 99 chr20 51191411 51191569 -20962313 - L1MC5 LINE L1 -269 7692 7540 1129 104 12 6 chr20 51191597 51191761 -20962121 - AluSg/x SINE Alu -14 298 134 1483 127 9 0 chr20 51191761 51191989 -20961893 - AluSg/x SINE Alu -11 299 70 378 0 0 0 chr20 51192700 51192742 -20961140 + (TG)n Simple_repeat Simple_repeat 2 43 0 629 288 84 76 chr20 51192747 51193091 -20960791 - L2 LINE L2 -15 3257 2911 243 277 152 18 chr20 51193147 51193259 -20960623 + MIR3 SINE MIR 81 207 -1 1901 108 0 76 chr20 51193659 51193975 -20959907 - AluSx SINE Alu -20 292 1 243 255 61 0 chr20 51194032 51194130 -20959752 + L1ME4a LINE L1 6017 6120 -1 861 188 0 0 chr20 51194424 51194578 -20959304 + MSTB LTR MaLR 31 184 -242 22 0 0 0 chr20 51194578 51194600 -20959282 + AT_rich Low_complexity Low_complexity 1 22 0 2253 62 41 3 chr20 51194600 51194890 -20958992 + AluY SINE Alu 1 301 -10 1221 96 6 0 chr20 51194895 51195061 -20958821 - AluSx SINE Alu -145 167 1 1385 165 41 4 chr20 51195061 51195303 -20958579 + MSTB LTR MaLR 175 425 -1 504 217 42 17 chr20 51195310 51195430 -20958452 + MIR SINE MIR 96 218 -44 828 111 7 30 chr20 51195433 51195568 -20958314 + AluJb SINE Alu 3 134 -178 451 356 10 5 chr20 51195978 51196172 -20957710 + MIR SINE MIR 33 227 -35 182 171 29 0 chr20 51196676 51196711 -20957171 - L2 LINE L2 -14 3299 3264 265 280 40 0 chr20 51196712 51196787 -20957095 - MIR SINE MIR -76 186 109 2104 115 10 10 chr20 51196877 51197189 -20956693 - AluSx SINE Alu 0 312 1 427 275 50 99 chr20 51197646 51197870 -20956012 + MIR SINE MIR 34 246 -16 * 447 272 95 0 chr20 51197827 51197974 -20955908 - MIR SINE MIR 0 262 102 442 259 148 0 chr20 51198436 51198571 -20955311 - MIR3 SINE MIR -11 197 43 402 167 24 36 chr20 51200203 51200287 -20953595 + MIR3 SINE MIR 85 167 -41 274 214 18 0 chr20 51200803 51200859 -20953023 + L2 LINE L2 3181 3237 -35 263 85 21 0 chr20 51201110 51201157 -20952725 + (TTTTG)n Simple_repeat Simple_repeat 3 50 0 1363 104 0 20 chr20 51201261 51201462 -20952420 - AluSg/x SINE Alu -12 300 104 512 317 66 6 chr20 51201946 51202113 -20951769 - MIR SINE MIR -30 232 56 238 211 0 0 chr20 51202173 51202223 -20951659 + MIR SINE MIR 101 149 -64 370 348 13 13 chr20 51202633 51202788 -20951094 + MIR SINE MIR 60 214 -48 291 304 139 9 chr20 51203615 51203730 -20950152 - L2 LINE L2 -7 3265 3136 236 310 199 51 chr20 51204461 51204677 -20949205 - L2 LINE L2 -18 3254 3007 408 360 0 13 chr20 51204684 51204834 -20949048 - L2 LINE L2 -1 3312 3165 2100 108 14 7 chr20 51204901 51205198 -20948684 + AluSx SINE Alu 1 299 -13 259 143 143 0 chr20 51205370 51205426 -20948456 - HAL1 LINE L1 -861 1646 1583 805 196 6 25 chr20 51205732 51205895 -20947987 + FRAM SINE Alu 1 160 -6 574 229 87 82 chr20 51205928 51206294 -20947588 - L1ME4a LINE L1 -215 5906 5539 248 312 194 0 chr20 51207510 51207603 -20946279 - L2 LINE L2 -3 3310 3200 214 248 101 54 chr20 51207868 51207997 -20945885 - L2 LINE L2 -530 2784 2650 338 197 0 3 chr20 51208199 51208270 -20945612 + MIR SINE MIR 89 146 -62 483 259 157 20 chr20 51208627 51208824 -20945058 - MIR SINE MIR -29 233 10 1214 168 0 13 chr20 51209386 51209597 -20944285 + L1 LINE L1 4534 4743 -1403 1538 145 66 52 chr20 51209597 51209886 -20943996 + AluJo SINE Alu 1 293 -19 1214 168 0 13 chr20 51209886 51209906 -20943976 + L1 LINE L1 4743 4762 -1384 432 0 0 0 chr20 51209906 51209954 -20943928 + (CA)n Simple_repeat Simple_repeat 2 49 0 2553 119 111 13 chr20 51209954 51210424 -20943458 + L1MA9 LINE L1 5797 6312 0 406 301 136 0 chr20 51210514 51210720 -20943162 - MIR SINE MIR -19 243 9 487 252 132 30 chr20 51210759 51210976 -20942906 - MIR SINE MIR 0 262 15 643 244 52 5 chr20 51211019 51211208 -20942674 - MIR SINE MIR -61 201 7 2177 109 0 0 chr20 51212049 51212351 -20941531 - AluSg SINE Alu -6 304 3 41 0 0 0 chr20 51212479 51212520 -20941362 + AT_rich Low_complexity Low_complexity 1 41 0 320 312 0 43 chr20 51212597 51212690 -20941192 - L2 LINE L2 -21 3251 3163 247 307 151 0 chr20 51213406 51213585 -20940297 + L2 LINE L2 2764 2969 -345 249 378 47 16 chr20 51213918 51214045 -20939837 + L2 LINE L2 3142 3272 0 281 319 36 36 chr20 51214418 51214443 -20939439 - MIR3 SINE MIR -22 186 162 782 277 105 67 chr20 51214443 51214978 -20938904 - MLT1H1 LTR MaLR 0 555 1 281 319 36 36 chr20 51214978 51215090 -20938792 - MIR3 SINE MIR -45 163 49 448 250 109 0 chr20 51215839 51215967 -20937915 + MIR SINE MIR 96 237 -25 2303 94 0 0 chr20 51215983 51216291 -20937591 + AluSc SINE Alu 1 308 -1 197 333 106 28 chr20 51216291 51216432 -20937450 - MIR SINE MIR -55 207 56 646 320 55 50 chr20 51216643 51217102 -20936780 - L2 LINE L2 -343 2971 2511 805 166 0 14 chr20 51217105 51217250 -20936632 + FLAM_C SINE Alu 1 143 0 310 301 289 5 chr20 51217256 51217671 -20936211 - L2 LINE L2 -798 2516 1984 397 304 196 8 chr20 51218806 51219066 -20934816 + L2 LINE L2 3005 3313 0 2143 105 0 26 chr20 51219092 51219398 -20934484 + AluSx SINE Alu 1 298 -14 209 273 102 11 chr20 51219400 51219488 -20934394 - MIR3 SINE MIR -27 181 86 289 359 83 7 chr20 51219588 51219733 -20934149 - L2 LINE L2 0 3313 3158 278 264 155 58 chr20 51219837 51220011 -20933871 - MIR SINE MIR -12 250 60 355 260 48 0 chr20 51220150 51220254 -20933628 + MIR3 SINE MIR 89 197 -11 396 232 71 0 chr20 51221111 51221223 -20932659 + MIR SINE MIR 94 213 -49 219 300 18 45 chr20 51221260 51221370 -20932512 - L2 LINE L2 -2 3311 3205 517 297 123 62 chr20 51221390 51221665 -20932217 + L1MC/D LINE L1 4532 4789 -1357 2420 52 3 10 chr20 51221665 51221971 -20931911 + AluY SINE Alu 1 304 -7 517 297 123 62 chr20 51221971 51222173 -20931709 + L1MC/D LINE L1 4789 4977 -1169 1675 157 17 0 chr20 51222173 51222460 -20931422 + AluJo SINE Alu 1 292 -20 517 297 123 62 chr20 51222460 51222934 -20930948 + L1MC/D LINE L1 4977 5171 -975 1266 159 95 84 chr20 51222934 51223068 -20930814 + MLT1A1 LTR MaLR 1 132 -233 2006 129 7 0 chr20 51223068 51223363 -20930519 + AluSx SINE Alu 1 297 -15 1266 159 95 84 chr20 51223363 51223587 -20930295 + MLT1A1 LTR MaLR 132 363 -2 517 297 123 62 chr20 51223587 51223676 -20930206 + L1MC/D LINE L1 5171 5253 -893 339 65 0 0 chr20 51223856 51223902 -20929980 + (TG)n Simple_repeat Simple_repeat 2 47 0 2027 88 8 0 chr20 51223919 51224182 -20929700 - AluSx SINE Alu -11 301 37 2341 58 0 39 chr20 51224227 51224537 -20929345 - AluY SINE Alu -13 298 1 22 35 0 0 chr20 51224795 51224824 -20929058 + AT_rich Low_complexity Low_complexity 1 29 0 561 323 7 36 chr20 51225018 51225062 -20928820 - L1ME LINE L1 -374 5747 5703 1483 152 57 47 chr20 51225062 51225358 -20928524 + AluJb SINE Alu 1 299 -13 561 323 7 36 chr20 51225358 51225592 -20928290 - L1ME LINE L1 -418 5703 5477 219 283 0 0 chr20 51226217 51226270 -20927612 - L2 LINE L2 -77 3236 3184 321 235 174 17 chr20 51226751 51226866 -20927016 - MIR SINE MIR -59 149 17 392 37 19 0 chr20 51226988 51227042 -20926840 + (TC)n Simple_repeat Simple_repeat 2 56 0 261 0 0 0 chr20 51227042 51227071 -20926811 + (CA)n Simple_repeat Simple_repeat 1 29 0 266 281 92 36 chr20 51227327 51227415 -20926467 - L1MC/D LINE L1 -416 5754 5672 3834 136 36 36 chr20 51227415 51227594 -20926288 - L1MA6 LINE L1 -1 6299 6121 2071 110 3 7 chr20 51227594 51227895 -20925987 - AluSx SINE Alu -12 300 1 3834 136 36 36 chr20 51227895 51228062 -20925820 - L1MA6 LINE L1 -179 6121 5955 2175 87 7 10 chr20 51228062 51228360 -20925522 - AluY SINE Alu -14 297 1 3834 136 36 36 chr20 51228360 51228754 -20925128 - L1MA6 LINE L1 -344 5956 5558 266 281 92 36 chr20 51228754 51228929 -20924953 - L1MC/D LINE L1 -498 5672 5621 496 304 132 22 chr20 51229268 51229587 -20924295 + L1ME4a LINE L1 5567 5920 -201 570 286 181 41 chr20 51229624 51229706 -20924176 + L2 LINE L2 2144 2213 -1059 1785 70 0 4 chr20 51229706 51229934 -20923948 - AluY SINE Alu -11 300 74 570 286 181 41 chr20 51229934 51230821 -20923061 + L2 LINE L2 2213 3259 -13 239 289 50 8 chr20 51230844 51230965 -20922917 + HAL1b LINE L1 1203 1328 -20 319 295 111 48 chr20 51231491 51231844 -20922038 + L2 LINE L2 2539 2913 -401 187 256 0 0 chr20 51231954 51231993 -20921889 + L2 LINE L2 3213 3251 -21 388 190 13 13 chr20 51232352 51232431 -20921451 - MIR SINE MIR -55 153 75 253 275 188 62 chr20 51232639 51232948 -20920934 + L2 LINE L2 2925 3272 0 253 265 44 0 chr20 51233591 51233681 -20920201 + MIR SINE MIR 94 144 -64 1151 59 0 0 chr20 51234304 51234440 -20919442 + AluSq/x SINE Alu 1 136 -176 263 266 101 36 chr20 51236968 51237107 -20916775 - MIR3 SINE MIR -4 204 57 188 345 73 9 chr20 51237769 51237879 -20916003 - MIR SINE MIR -74 188 72 480 310 214 3 chr20 51238050 51238405 -20915477 + L2 LINE L2 1826 2255 -1059 356 325 50 0 chr20 51238903 51239023 -20914859 + MIR SINE MIR 60 185 -77 550 301 150 4 chr20 51239774 51240000 -20913882 - MIR SINE MIR 0 262 4 385 309 43 6 chr20 51240028 51240190 -20913692 - MIR3 SINE MIR -26 182 15 395 147 0 13 chr20 51240191 51240266 -20913616 + (TTCC)n Simple_repeat Simple_repeat 4 77 0 1925 152 7 0 chr20 51240278 51240587 -20913295 - AluJo SINE Alu -1 311 1 244 390 124 6 chr20 51240993 51241170 -20912712 + MIR SINE MIR 53 250 -12 187 227 152 15 chr20 51241184 51241250 -20912632 - MIR SINE MIR -70 192 118 429 259 132 35 chr20 51241366 51241540 -20912342 + MIR SINE MIR 22 212 -50 582 277 154 31 chr20 51243294 51243720 -20910162 + L2 LINE L2 2506 2878 -435 2182 109 0 0 chr20 51243720 51244022 -20909860 - AluY SINE Alu -9 302 1 582 277 154 31 chr20 51244022 51244248 -20909634 + L2 LINE L2 2878 3302 -11 249 306 9 54 chr20 51244414 51244525 -20909357 + MIR SINE MIR 157 262 0 2053 106 3 7 chr20 51244784 51245105 -20908777 + AluSx SINE Alu 1 320 0 197 328 48 40 chr20 51245387 51245512 -20908370 - MIR3 SINE MIR -49 159 34 180 227 0 23 chr20 51245841 51245885 -20907997 - MIR3 SINE MIR -52 156 114 240 35 0 0 chr20 51245959 51245988 -20907894 + (TG)n Simple_repeat Simple_repeat 1 29 0 632 219 124 76 chr20 51246564 51246601 -20907281 + HAL1 LINE L1 838 872 -1635 2120 122 0 16 chr20 51246601 51246913 -20906969 + AluSc SINE Alu 1 307 -2 632 219 124 76 chr20 51246913 51247282 -20906600 + HAL1 LINE L1 872 1267 -1240 1764 166 33 0 chr20 51247282 51247583 -20906299 + AluJb SINE Alu 1 311 -1 632 219 124 76 chr20 51247583 51247595 -20906287 + HAL1 LINE L1 1267 1277 -1230 218 216 0 20 chr20 51248352 51248403 -20905479 - L2 LINE L2 -50 3222 3173 360 174 43 0 chr20 51248656 51248725 -20905157 - L2 LINE L2 -245 3068 2997 429 286 118 16 chr20 51248783 51249028 -20904854 - L2 LINE L2 -422 2892 2623 2205 105 0 3 chr20 51249227 51249532 -20904350 - AluSq SINE Alu -6 307 4 500 261 17 0 chr20 51249833 51249952 -20903930 + MIR SINE MIR 20 140 -122 * 520 305 198 9 chr20 51249935 51250279 -20903603 - L2 LINE L2 -397 2917 2509 255 291 13 13 chr20 51250875 51250954 -20902928 - MIR SINE MIR -5 257 179 693 276 95 0 chr20 51250968 51251178 -20902704 + MIR SINE MIR 12 241 -21 322 311 99 6 chr20 51251895 51252056 -20901826 + MIR SINE MIR 23 198 -64 2232 104 3 0 chr20 51252158 51252457 -20901425 + AluSx SINE Alu 1 300 -12 183 80 0 0 chr20 51252849 51252874 -20901008 + (GA)n Simple_repeat Simple_repeat 2 26 0 517 319 41 22 chr20 51252940 51253163 -20900719 - MIR SINE MIR -5 257 31 281 246 49 0 chr20 51253162 51253223 -20900659 - MIR SINE MIR -177 85 22 * 2051 115 3 13 chr20 51253342 51253646 -20900236 - AluSx SINE Alu -11 301 1 519 279 79 6 chr20 51253731 51253896 -20899986 + MIR SINE MIR 12 188 -74 303 215 15 0 chr20 51254496 51254561 -20899321 + MIR SINE MIR 74 139 -69 637 276 83 0 chr20 51254631 51254823 -20899059 + MIR SINE MIR 50 257 -5 2202 109 0 3 chr20 51254835 51255147 -20898735 + AluSq SINE Alu 1 311 -2 277 168 25 0 chr20 51255436 51255515 -20898367 - L2 LINE L2 -290 2982 2901 282 333 162 41 chr20 51255688 51255953 -20897929 - L2 LINE L2 -676 2638 2406 2248 96 3 0 chr20 51255953 51256254 -20897628 - AluSq SINE Alu -11 302 1 282 333 162 41 chr20 51256254 51256574 -20897308 - L2 LINE L2 -908 2406 1982 1256 243 88 48 chr20 51256592 51256673 -20897209 + MLT1D LTR MaLR 3 79 -426 2118 116 0 3 chr20 51256673 51256966 -20896916 + AluSx SINE Alu 1 292 -20 1256 243 88 48 chr20 51256966 51256977 -20896905 + MLT1D LTR MaLR 79 88 -417 1713 117 8 0 chr20 51256977 51257224 -20896658 + AluSq SINE Alu 51 299 -14 1256 243 88 48 chr20 51257224 51257608 -20896274 + MLT1D LTR MaLR 88 499 -6 204 334 57 54 chr20 51257614 51257698 -20896184 - L2 LINE L2 -1341 1973 1891 392 304 118 19 chr20 51257698 51257859 -20896023 + MER5B DNA MER1_type 2 178 0 204 334 57 54 chr20 51257859 51258142 -20895740 - L2 LINE L2 -1423 1891 1605 2173 119 0 0 chr20 51258297 51258609 -20895273 - AluSx SINE Alu 0 312 1 461 309 45 45 chr20 51258610 51258856 -20895026 + MLT1I LTR MaLR 158 403 -6 188 339 0 16 chr20 51259219 51259281 -20894601 - L2 LINE L2 -610 2704 2644 573 235 240 0 chr20 51259731 51259927 -20893955 - MIR SINE MIR -18 244 2 324 236 58 115 chr20 51260008 51260178 -20893704 - MIR SINE MIR -63 145 21 305 167 218 0 chr20 51260373 51260451 -20893431 - L2 LINE L2 -11 3302 3208 344 270 11 0 chr20 51260467 51260556 -20893326 - MIR SINE MIR -86 122 33 287 258 108 17 chr20 51260772 51260892 -20892990 + L2 LINE L2 3103 3233 -39 1302 180 97 7 chr20 51261642 51261920 -20891962 + AluSx SINE Alu 1 303 -9 1563 87 0 0 chr20 51261971 51262167 -20891715 + AluSg/x SINE Alu 91 286 -26 500 290 15 0 chr20 51262265 51262396 -20891486 - MIR SINE MIR -97 165 33 359 333 98 22 chr20 51263090 51263315 -20890567 - MIR SINE MIR -19 243 2 755 261 47 34 chr20 51263375 51263609 -20890273 + MIR SINE MIR 8 244 -18 2352 85 0 3 chr20 51263694 51264000 -20889882 + AluSp SINE Alu 1 305 -8 326 266 64 9 chr20 51264060 51264169 -20889713 + MIR SINE MIR 82 196 -66 2031 101 4 0 chr20 51264177 51264454 -20889428 + AluSx SINE Alu 1 278 -34 904 140 14 0 chr20 51264454 51264597 -20889285 + AluSg/x SINE Alu 150 294 -18 2439 157 25 52 chr20 51264796 51265273 -20888609 + LTR32 LTR ERVL 8 471 0 331 247 21 21 chr20 51265301 51265394 -20888488 + MER5A DNA MER1_type 11 103 -86 473 252 56 21 chr20 51265593 51265736 -20888146 + MIR SINE MIR 3 150 -112 189 306 0 0 chr20 51266042 51266091 -20887791 - MIR SINE MIR -65 143 95 2200 112 0 0 chr20 51266272 51266576 -20887306 - AluY SINE Alu -7 304 1 1982 118 0 20 chr20 51266958 51267263 -20886619 - AluJo SINE Alu -1 311 13 180 296 0 0 chr20 51267709 51267753 -20886129 - L2 LINE L2 -18 3254 3211 207 239 0 0 chr20 51267846 51267892 -20885990 - MIR SINE MIR -115 147 102 42 71 0 0 chr20 51268271 51268355 -20885527 + GC_rich Low_complexity Low_complexity 1 84 0 691 303 49 26 chr20 51268808 51269260 -20884622 + L1ME3A LINE L1 5618 5951 -219 487 139 0 0 chr20 51269276 51269403 -20884479 - AluSg/x SINE Alu 0 329 203 634 86 0 0 chr20 51269441 51269522 -20884360 - AluSq SINE Alu -109 204 124 2009 120 13 3 chr20 51269522 51269831 -20884051 - AluSx SINE Alu 0 312 1 203 326 101 22 chr20 51269924 51270102 -20883780 - L2 LINE L2 -443 2871 2680 * 534 223 147 32 chr20 51270099 51270256 -20883626 + MER5A DNA MER1_type 9 183 -6 187 327 104 35 chr20 51270267 51270469 -20883413 - L2 LINE L2 -629 2685 2470 2285 104 18 68 chr20 51270470 51270517 -20883365 - THE1B LTR MaLR 0 364 316 2158 90 3 39 chr20 51270517 51270828 -20883054 + AluSp SINE Alu 3 302 -11 2285 104 18 68 chr20 51270828 51271163 -20882719 - THE1B LTR MaLR -48 316 1 512 350 46 17 chr20 51271239 51271479 -20882403 - MIR SINE MIR 0 262 16 2125 250 65 6 chr20 51271582 51272102 -20881780 + MLT1H1 LTR MaLR 3 553 -2 922 239 39 27 chr20 51272252 51272511 -20881371 + LTR33 LTR ERVL 12 273 -248 2005 133 0 0 chr20 51272580 51272866 -20881016 - AluSx SINE Alu -26 286 1 1021 262 123 37 chr20 51272955 51273363 -20880519 - LTR16C LTR ERVL -7 484 42 551 184 0 0 chr20 51273378 51273476 -20880406 + LTR33 LTR ERVL 424 521 0 1596 70 0 0 chr20 51273686 51273886 -20879996 + AluSx SINE Alu 1 200 -112 240 136 0 0 chr20 51273886 51273930 -20879952 + AluSx SINE Alu 255 298 -3 363 239 92 18 chr20 51273955 51274064 -20879818 + MIR SINE MIR 56 172 -90 402 286 238 0 chr20 51274112 51274322 -20879560 - Charlie8 DNA MER1_type -2132 285 26 1058 229 57 15 chr20 51274411 51274673 -20879209 - MLT1J LTR MaLR -2 509 237 1171 126 11 0 chr20 51274689 51274872 -20879010 - AluY SINE Alu -7 304 120 411 226 38 19 chr20 51274917 51275023 -20878859 - MLT1J LTR MaLR -361 150 43 1899 136 3 3 chr20 51275037 51275324 -20878558 + AluSg SINE Alu 9 295 -15 1835 191 87 6 chr20 51275584 51275950 -20877932 - MSTD LTR MaLR 0 396 1 788 285 55 60 chr20 51276042 51276439 -20877443 - HAL1 LINE L1 -2112 395 1 427 250 45 27 chr20 51277113 51277225 -20876657 + MER81 DNA DNA 1 114 0 1360 194 40 111 chr20 51277289 51277711 -20876171 - MSTD LTR MaLR -4 392 1 2022 117 3 3 chr20 51277783 51278074 -20875808 - AluSq SINE Alu -22 291 1 874 268 26 17 chr20 51278099 51278330 -20875552 + MIR SINE MIR 6 238 -24 601 212 222 68 chr20 51278334 51278627 -20875255 - MER46C DNA MER2_type 0 338 1 2292 94 3 0 chr20 51279157 51279455 -20874427 + AluSx SINE Alu 2 300 -12 272 272 49 0 chr20 51279484 51279565 -20874317 - L2 LINE L2 -1 3312 3228 2103 125 3 0 chr20 51280116 51280427 -20873455 + AluSx SINE Alu 1 312 0 208 263 53 21 chr20 51280440 51280460 -20873422 + MIR SINE MIR 31 49 -159 186 103 0 0 chr20 51280460 51280489 -20873393 + (TTCA)n Simple_repeat Simple_repeat 2 30 0 208 263 53 21 chr20 51280489 51280563 -20873319 + MIR SINE MIR 49 128 -80 * 225 333 21 10 chr20 51280562 51280658 -20873224 - L2 LINE L2 -32 3281 3185 1107 237 23 8 chr20 51280762 51281024 -20872858 + MER69 DNA AcHobo 6 271 -2255 847 172 116 0 chr20 51281021 51281231 -20872651 + MER69 DNA AcHobo 1859 2093 -433 699 160 25 0 chr20 51281231 51281350 -20872532 - Tigger7 DNA MER2_type 0 2487 2366 * 1241 201 41 45 chr20 51281329 51281597 -20872285 - Tigger7 DNA MER2_type -2220 267 1 674 194 90 45 chr20 51281597 51281652 -20872230 + MER69 DNA AcHobo 2091 2142 -384 1557 216 0 0 chr20 51281652 51281948 -20871934 + AluJo SINE Alu 1 296 -16 2206 100 33 0 chr20 51281952 51282252 -20871630 + AluSx SINE Alu 1 310 -2 674 194 90 45 chr20 51282252 51282413 -20871469 + MER69 DNA AcHobo 2144 2322 -204 426 346 96 26 chr20 51282607 51282991 -20870891 - L3 LINE CR1 -27 1550 1140 741 171 44 122 chr20 51283403 51283470 -20870412 + LTR49-int LTR ERV1 1526 1597 -4734 2803 6 0 0 chr20 51283470 51283781 -20870101 + AluYa5 SINE Alu 1 311 0 741 171 44 122 chr20 51283781 51284034 -20869848 + LTR49-int LTR ERV1 1597 1821 -4510 340 154 77 0 chr20 51284025 51284090 -20869792 + LTR49-int LTR ERV1 2741 2810 -3521 * 465 83 17 175 chr20 51284090 51284129 -20869753 + U6 snRNA snRNA 1 45 -62 2184 113 0 0 chr20 51284129 51284412 -20869470 + AluSx SINE Alu 1 314 0 259 32 0 0 chr20 51284412 51284443 -20869439 + (TAAA)n Simple_repeat Simple_repeat 2 156 0 465 83 17 175 chr20 51284443 51284522 -20869360 + U6 snRNA snRNA 45 101 -6 27 29 0 0 chr20 51284522 51284556 -20869326 + AT_rich Low_complexity Low_complexity 1 34 0 1832 133 71 10 chr20 51284556 51284850 -20869032 + AluSx SINE Alu 1 312 0 478 199 70 43 chr20 51284913 51285099 -20868783 + LTR49-int LTR ERV1 1705 1895 -3041 1916 160 0 29 chr20 51285103 51285410 -20868472 + AluJo SINE Alu 1 298 -14 2279 89 24 3 chr20 51285542 51285834 -20868048 + AluSx SINE Alu 1 298 -14 469 211 28 134 chr20 51285834 51286145 -20867737 + LTR49-int LTR ERV1 2762 3116 -1955 * 749 151 23 97 chr20 51286142 51286311 -20867571 + LTR49-int LTR ERV1 4169 4314 -3806 2230 131 0 3 chr20 51286311 51286624 -20867258 - AluSx SINE Alu 0 312 1 749 151 23 97 chr20 51286624 51286712 -20867170 + LTR49-int LTR ERV1 4314 4407 -3713 275 210 0 0 chr20 51286708 51286770 -20867112 + LTR49-int LTR ERV1 3921 3982 -2349 * 1449 156 89 117 chr20 51286770 51287233 -20866649 + LTR7 LTR ERV1 1 450 0 1078 205 20 21 chr20 51287233 51287661 -20866221 + HERVH LTR ERV1 1 459 -7254 14548 174 16 28 chr20 51287719 51292416 -20861466 + HERVH LTR ERV1 590 5020 -2287 2527 121 16 12 chr20 51292420 51292849 -20861033 + HERVH LTR ERV1 7283 7713 0 1411 139 94 131 chr20 51292849 51293316 -20860566 + LTR7 LTR ERV1 1 450 0 566 133 19 19 chr20 51293316 51293421 -20860461 + LTR49-int LTR ERV1 3978 4082 -2249 303 219 0 0 chr20 51293431 51293491 -20860391 + MLT1L LTR MaLR 412 471 -144 1377 191 0 54 chr20 51293491 51293548 -20860334 + MER41D LTR ERV1 1 60 -497 2257 135 0 0 chr20 51293548 51293860 -20860022 + AluSx SINE Alu 1 312 0 1377 191 0 54 chr20 51293860 51294107 -20859775 + MER41D LTR ERV1 60 290 -267 2472 71 14 0 chr20 51294107 51294402 -20859480 - AluY SINE Alu -12 299 1 23 22 0 44 chr20 51294411 51294439 -20859443 + AT_rich Low_complexity Low_complexity 1 28 -15 2046 148 3 13 chr20 51294439 51294744 -20859138 + AluSx SINE Alu 1 302 -10 23 22 0 44 chr20 51294744 51294760 -20859122 + AT_rich Low_complexity Low_complexity 28 43 0 367 288 14 5 chr20 51294766 51294921 -20858961 - L2 LINE L2 -349 2965 2741 549 266 19 77 chr20 51295067 51295326 -20858556 - L2 LINE L2 -173 3099 2856 569 260 76 18 chr20 51295363 51295584 -20858298 - L1ME4a LINE L1 -233 5888 5642 575 253 57 10 chr20 51295863 51296036 -20857846 + MIR SINE MIR 17 197 -62 1214 151 69 75 chr20 51296127 51296194 -20857688 - L1MB8 LINE L1 -2 6176 6110 2290 115 0 0 chr20 51296194 51296498 -20857384 + AluSx SINE Alu 1 304 -8 1214 151 69 75 chr20 51296498 51296703 -20857179 - L1MB8 LINE L1 -68 6110 5904 1895 144 10 13 chr20 51296703 51297002 -20856880 - AluJo SINE Alu -14 298 1 1214 151 69 75 chr20 51297002 51297033 -20856849 - L1MB8 LINE L1 -274 5904 5874 769 187 0 13 chr20 51297032 51297187 -20856695 - L1ME4a LINE L1 -630 5554 5402 * 2158 84 3 84 chr20 51297366 51297686 -20856196 - AluSc SINE Alu -15 294 1 2121 138 0 0 chr20 51297713 51298011 -20855871 + AluSx SINE Alu 1 298 -14 343 102 0 34 chr20 51298506 51298565 -20855317 - MIR SINE MIR -101 161 107 418 257 73 59 chr20 51299225 51299361 -20854521 + MIR3 SINE MIR 3 140 -68 368 292 39 15 chr20 51299390 51299520 -20854362 - L2 LINE L2 -12 3301 3169 427 192 21 11 chr20 51299883 51300001 -20853881 - MIR SINE MIR -65 143 28 366 238 71 100 chr20 51300346 51300556 -20853326 - MIR SINE MIR 0 262 59 650 241 77 0 chr20 51300630 51300800 -20853082 + MER69 DNA AcHobo 1 183 -1043 197 180 120 0 chr20 51300800 51300850 -20853032 + L2 LINE L2 3254 3309 -4 196 296 20 10 chr20 51301002 51301100 -20852782 - L2 LINE L2 -499 2815 2717 508 271 69 21 chr20 51301610 51301858 -20852024 - MIR SINE MIR -6 256 3 389 260 96 107 chr20 51302083 51302287 -20851595 + L1ME3A LINE L1 5335 5537 -2271 2413 96 0 6 chr20 51302287 51302600 -20851282 + AluSx SINE Alu 1 311 -1 389 260 96 107 chr20 51302600 51302676 -20851206 + L1ME3A LINE L1 5537 5612 -2196 278 273 15 0 chr20 51302720 51302786 -20851096 + MER33 DNA MER1_type 1 67 -257 1412 143 14 0 chr20 51302787 51302996 -20850886 + AluSg/x SINE Alu 87 298 -14 762 170 69 53 chr20 51302996 51303141 -20850741 + MER33 DNA MER1_type 56 208 -2377 2270 122 0 13 chr20 51303141 51303453 -20850429 - AluSx SINE Alu -4 308 1 762 170 69 53 chr20 51303453 51303554 -20850328 + MER33 DNA MER1_type 208 306 -18 2887 161 19 13 chr20 51303563 51304097 -20849785 - L1MB3 LINE L1 -3 6180 5644 1534 239 100 7 chr20 51304127 51304558 -20849324 + L1ME3A LINE L1 5695 6165 -5 500 216 60 0 chr20 51304568 51304684 -20849198 + L1MC/D LINE L1 5613 5735 -2073 4006 150 16 36 chr20 51304684 51305185 -20848697 + L1MB3 LINE L1 5442 5951 -232 2470 83 3 0 chr20 51305185 51305485 -20848397 + AluSx SINE Alu 1 301 -11 4006 150 16 36 chr20 51305485 51305687 -20848195 + L1MB3 LINE L1 5951 6132 -51 2398 91 0 0 chr20 51305687 51305984 -20847898 - AluY SINE Alu -10 301 5 4006 150 16 36 chr20 51305984 51306033 -20847849 + L1MB3 LINE L1 6132 6180 -3 1847 124 4 15 chr20 51306932 51307191 -20846691 + AluSx SINE Alu 35 290 -22 575 191 177 47 chr20 51307297 51307512 -20846370 - MLT1H LTR MaLR -302 247 5 302 263 12 0 chr20 51307532 51307612 -20846270 - MLT1J1 LTR MaLR -358 88 8 222 192 0 0 chr20 51307740 51307790 -20846092 + MIR SINE MIR 101 149 -113 465 224 147 7 chr20 51308498 51308641 -20845241 - MIR SINE MIR -28 234 72 375 109 0 0 chr20 51308771 51308826 -20845056 + MLT1I LTR MaLR 355 409 0 2562 149 37 12 chr20 51308912 51309401 -20844481 - L1MB3 LINE L1 -3 6180 5680 221 257 92 0 chr20 51309439 51309503 -20844379 + MIR SINE MIR 37 107 -101 362 273 43 43 chr20 51309817 51309956 -20843926 - MIR3 SINE MIR -8 200 62 999 262 130 13 chr20 51310080 51310465 -20843417 - MLT1J1 LTR MaLR -16 430 1 931 275 85 19 chr20 51310471 51310849 -20843033 + MLT1L LTR MaLR 209 611 -4 264 222 0 0 chr20 51310900 51310954 -20842928 - MLT1J2 LTR MaLR -16 434 381 618 255 61 24 chr20 51311126 51311338 -20842544 + MIR SINE MIR 30 249 -13 327 317 62 37 chr20 51311306 51311467 -20842415 - MIR SINE MIR -52 210 46 * 458 292 163 10 chr20 51311470 51311556 -20842326 - MIR SINE MIR -17 245 174 183 80 0 0 chr20 51311556 51311581 -20842301 + (TTA)n Simple_repeat Simple_repeat 2 26 0 458 292 163 10 chr20 51311581 51311703 -20842179 - MIR SINE MIR -88 174 5 661 295 37 34 chr20 51311873 51312141 -20841741 + L3 LINE CR1 1306 1574 -3 1086 251 82 36 chr20 51312412 51312466 -20841416 + MLT1I LTR MaLR 1 51 -358 2100 157 43 3 chr20 51312466 51312817 -20841065 - MLT1A1 LTR MaLR 0 365 1 1086 251 82 36 chr20 51312817 51313153 -20840729 + MLT1I LTR MaLR 51 409 0 268 278 204 0 chr20 51313681 51313789 -20840093 + L2 LINE L2 3026 3155 -158 1312 86 0 65 chr20 51313791 51313977 -20839905 - AluSc SINE Alu -3 306 133 189 231 0 58 chr20 51313985 51314037 -20839845 + L2 LINE L2 3173 3221 -92 235 216 108 36 chr20 51314071 51314182 -20839700 - L1MC4 LINE L1 -1 8041 7923 2548 67 0 0 chr20 51314253 51314552 -20839330 + AluY SINE Alu 1 299 -12 319 274 116 11 chr20 51314552 51314647 -20839235 + L2 LINE L2 3208 3312 -1 888 229 11 6 chr20 51314650 51314829 -20839053 - MIR SINE MIR -72 190 11 361 259 32 125 chr20 51315303 51315435 -20838447 + MIR SINE MIR 48 154 -108 577 245 80 6 chr20 51315435 51315598 -20838284 - MER96 DNA MER1_type 0 175 1 361 259 32 125 chr20 51315598 51315681 -20838201 + MIR SINE MIR 154 243 -19 2286 110 3 25 chr20 51315708 51315885 -20837997 - AluSx SINE Alu -1 311 143 2615 44 0 3 chr20 51315885 51316183 -20837699 - AluY SINE Alu -14 297 1 2286 110 3 25 chr20 51316183 51316323 -20837559 - AluSx SINE Alu -169 143 1 909 308 4 0 chr20 51316541 51316768 -20837114 - MIR SINE MIR 0 262 35 232 408 0 8 chr20 51317115 51317235 -20836647 - MIR SINE MIR -109 153 35 376 321 115 0 chr20 51317978 51318143 -20835739 + MIR SINE MIR 4 187 -75 233 266 16 0 chr20 51318637 51318701 -20835181 - MIR SINE MIR -21 241 177 2041 110 37 0 chr20 51318701 51319041 -20834841 - AluSx SINE Alu 0 350 1 806 249 0 17 chr20 51319069 51319246 -20834636 - MIR SINE MIR -68 194 21 395 208 0 62 chr20 51320116 51320212 -20833670 - MIR SINE MIR -55 153 64 1017 223 35 0 chr20 51320303 51320500 -20833382 + MIR SINE MIR 2 205 -57 315 263 62 27 chr20 51321353 51321503 -20832379 - MIR3 SINE MIR -21 187 31 593 267 53 72 chr20 51321597 51321957 -20831925 + L2 LINE L2 2827 3179 -93 561 201 6 17 chr20 51322025 51322199 -20831683 + (TGGA)n Simple_repeat Simple_repeat 1 172 0 488 311 61 18 chr20 51322579 51322743 -20831139 - MIR3 SINE MIR -1 207 37 240 208 38 0 chr20 51322747 51322800 -20831082 - L2 LINE L2 0 3313 3259 404 259 88 25 chr20 51323762 51323999 -20829883 + L1M4 LINE L1 3677 3929 -2217 1128 313 47 42 chr20 51324017 51324211 -20829671 + L1M4 LINE L1 3365 3557 -2589 2107 144 3 3 chr20 51324211 51324516 -20829366 - AluJb SINE Alu -7 305 1 1128 313 47 42 chr20 51324516 51325394 -20828488 + L1M4 LINE L1 3557 4442 -1704 1800 159 34 10 chr20 51325432 51325727 -20828155 + AluJb SINE Alu 1 302 -10 320 0 25 0 chr20 51325787 51325827 -20828055 + (CA)n Simple_repeat Simple_repeat 2 42 0 647 234 94 81 chr20 51325875 51326256 -20827626 - MLT1J LTR MaLR -125 386 1 314 279 0 0 chr20 51326287 51326355 -20827527 - MIR SINE MIR -83 125 58 2434 89 0 0 chr20 51326691 51326995 -20826887 - AluSx SINE Alu -8 304 1 225 240 10 10 chr20 51327063 51327130 -20826752 - MIR SINE MIR -108 154 89 417 235 45 52 chr20 51327141 51327297 -20826585 + MLT1I LTR MaLR 1 155 -254 492 240 247 7 chr20 51327349 51327495 -20826387 - MER5A DNA MER1_type 0 189 9 267 232 25 14 chr20 51327522 51327612 -20826270 + MLT1I LTR MaLR 316 389 -20 492 235 87 0 chr20 51327695 51327810 -20826072 + MER96 DNA MER1_type? 51 175 0 428 194 104 35 chr20 51328485 51328629 -20825253 + L1ME3 LINE L1 5939 6092 -70 822 203 40 0 chr20 51328648 51328886 -20824996 + AluJb SINE Alu 130 373 0 429 244 52 17 chr20 51329029 51329144 -20824738 + MIR SINE MIR 34 152 -110 2456 206 40 34 chr20 51329237 51329705 -20824177 + MER97c DNA MER1_type? 1 476 -614 1846 128 36 23 chr20 51329705 51330009 -20823873 - AluSx SINE Alu -4 308 1 2456 206 40 34 chr20 51330009 51330224 -20823658 + MER97c DNA MER1_type? 476 688 -402 434 190 10 10 chr20 51330227 51330327 -20823555 + MER97c DNA MER1_type? 991 1090 0 345 287 80 95 chr20 51330820 51331221 -20822661 + L2 LINE L2 2847 3241 -31 309 51 0 0 chr20 51331622 51331661 -20822221 + (CA)n Simple_repeat Simple_repeat 1 39 0 357 207 0 0 chr20 51331764 51331851 -20822031 + (TG)n Simple_repeat Simple_repeat 1 87 0 210 255 0 0 chr20 51332178 51332229 -20821653 + MIR SINE MIR 81 131 -77 190 224 329 0 chr20 51332565 51332641 -20821241 - MIR SINE MIR -67 195 95 318 221 65 0 chr20 51332643 51332720 -20821162 - MIR SINE MIR -117 145 64 244 295 34 74 chr20 51333378 51333527 -20820355 - MIR SINE MIR -70 192 50 424 253 198 22 chr20 51333641 51333823 -20820059 + MIR SINE MIR 22 235 -27 2445 96 0 13 chr20 51334136 51334450 -20819432 + AluSg SINE Alu 1 310 0 375 222 122 0 chr20 51334491 51334581 -20819301 - MER5A DNA MER1_type -80 109 9 228 290 65 57 chr20 51335233 51335357 -20818525 + MIR3 SINE MIR 34 158 -50 375 305 26 26 chr20 51335359 51335513 -20818369 - MER5A DNA MER1_type 0 189 36 792 243 104 14 chr20 51335740 51335914 -20817968 - MIR SINE MIR -19 243 43 2096 114 3 3 chr20 51335914 51336222 -20817660 + AluSx SINE Alu 1 308 -4 792 243 104 14 chr20 51336222 51336269 -20817613 - MIR SINE MIR -219 43 2 446 276 69 17 chr20 51337013 51337187 -20816695 - MIR SINE MIR 0 262 80 916 179 68 24 chr20 51337358 51337565 -20816317 - MER20 DNA MER1_type 0 219 4 333 192 0 0 chr20 51337614 51337687 -20816195 + HAL1 LINE L1 2435 2507 0 1834 163 3 16 chr20 51337766 51338079 -20815803 + AluJo SINE Alu 1 309 -3 859 197 101 0 chr20 51338272 51338470 -20815412 - MIR SINE MIR -11 251 34 1846 191 127 30 chr20 51338877 51338997 -20814885 + L2 LINE L2 2346 2453 -861 2015 132 3 22 chr20 51338997 51339315 -20814567 - AluSx SINE Alu 0 312 1 1846 191 127 30 chr20 51339315 51339755 -20814127 + L2 LINE L2 2453 2960 -354 210 324 15 0 chr20 51339782 51339850 -20814032 + MIR SINE MIR 173 241 -21 440 263 246 6 chr20 51339874 51340045 -20813837 - MIR SINE MIR -14 248 37 191 260 0 0 chr20 51340322 51340372 -20813510 + L2 LINE L2 3217 3266 -6 189 253 74 53 chr20 51340452 51340547 -20813335 - L2 LINE L2 -33 3239 3143 284 273 143 26 chr20 51340596 51340750 -20813132 - MIR SINE MIR -19 243 72 449 265 27 14 chr20 51340937 51341090 -20812792 - MIR SINE MIR -63 145 27 2109 128 0 0 chr20 51341697 51342001 -20811881 + AluSq SINE Alu 1 304 -9 21 0 0 0 chr20 51342081 51342102 -20811780 + AT_rich Low_complexity Low_complexity 1 21 0 34 72 0 0 chr20 51342192 51342261 -20811621 + AT_rich Low_complexity Low_complexity 1 69 0 777 230 17 17 chr20 51342548 51342722 -20811160 + MIR SINE MIR 62 235 -27 1187 167 38 0 chr20 51342934 51343144 -20810738 - MER20 DNA MER1_type 0 219 2 391 290 148 24 chr20 51343400 51343569 -20810313 - MIR SINE MIR -3 259 70 1915 94 19 66 chr20 51344526 51344846 -20809036 - AluSp SINE Alu -8 305 1 274 170 113 0 chr20 51344846 51344899 -20808983 - MIR SINE MIR -3 259 201 196 53 53 0 chr20 51345037 51345075 -20808807 + A-rich Low_complexity Low_complexity 3 42 0 388 343 0 6 chr20 51345209 51345227 -20808655 - L1MA10 LINE L1 0 6334 6317 1347 217 7 7 chr20 51345227 51345517 -20808365 - L1ME2 LINE L1 -9 6155 5866 353 326 141 4 chr20 51345619 51345889 -20807993 - LTR33A LTR ERVL -183 340 34 313 387 85 10 chr20 51346320 51346519 -20807363 - MIR SINE MIR 0 262 49 752 267 17 0 chr20 51346547 51346727 -20807155 + MIR SINE MIR 13 195 -67 2110 106 0 0 chr20 51346740 51347054 -20806828 + AluSx SINE Alu 1 314 0 3282 122 14 4 chr20 51347054 51347547 -20806335 + LTR3b LTR ERVK 3 500 0 247 118 0 0 chr20 51347547 51347581 -20806301 + LTR3b LTR ERVK 463 496 -4 213 39 0 0 chr20 51347581 51347607 -20806275 + (TAAAA)n Simple_repeat Simple_repeat 4 29 0 358 216 49 39 chr20 51347608 51347710 -20806172 + MIR SINE MIR 91 193 -69 2192 88 7 7 chr20 51347714 51348010 -20805872 + AluSx SINE Alu 1 296 -16 2678 101 127 12 chr20 51348685 51349102 -20804780 - MER4C LTR ERV1 0 465 1 190 222 74 0 chr20 51349127 51349181 -20804701 - MIR SINE MIR -95 167 110 400 186 18 0 chr20 51349246 51349359 -20804523 + CT-rich Low_complexity Low_complexity 1 115 0 624 214 67 31 chr20 51349393 51349429 -20804453 - L1ME3A LINE L1 0 6170 6137 1944 136 10 3 chr20 51349429 51349739 -20804143 + AluJb SINE Alu 1 312 0 624 214 67 31 chr20 51349739 51349926 -20803956 - L1ME3A LINE L1 -33 6137 5939 488 132 189 9 chr20 51349926 51350032 -20803850 + MER5A DNA MER1_type 28 152 -37 4084 91 24 0 chr20 51350487 51351028 -20802854 + MER41A LTR ERV1 1 554 0 801 90 49 0 chr20 51351437 51351559 -20802323 - MER41A LTR ERV1 -13 541 414 667 75 11 0 chr20 51351568 51351662 -20802220 + MER41B LTR ERV1 98 192 -443 4145 82 26 11 chr20 51352002 51352548 -20801334 - MER41A LTR ERV1 0 554 1 794 178 77 24 chr20 51352570 51352739 -20801143 - MER97b DNA MER1_type? -875 178 1 885 215 74 48 chr20 51352764 51353074 -20800808 - MLT1J2 LTR MaLR -68 382 54 773 280 68 81 chr20 51353321 51353559 -20800323 + MLT1J2 LTR MaLR 38 271 -179 1007 191 62 0 chr20 51353559 51353737 -20800145 - MER5A DNA MER1_type 0 189 1 773 280 68 81 chr20 51353737 51353895 -20799987 + MLT1J2 LTR MaLR 271 429 -21 330 44 44 0 chr20 51353916 51353961 -20799921 + MLT1K LTR MaLR 542 588 0 199 333 13 0 chr20 51354599 51354674 -20799208 - MIR SINE MIR -103 105 30 2038 127 7 3 chr20 51354812 51355119 -20798763 + AluJb SINE Alu 5 312 0 1143 227 140 12 chr20 51355277 51355620 -20798262 - MLT1J2 LTR MaLR 0 450 64 316 163 0 0 chr20 51356140 51356202 -20797680 + Alu SINE Alu 1 46 -256 190 234 21 0 chr20 51356314 51356361 -20797521 + MIR SINE MIR 11 58 -204 354 211 0 40 chr20 51356361 51356437 -20797445 - FRAM/FAM SINE Alu -99 67 1 * 358 203 0 0 chr20 51356437 51356508 -20797374 + MER3 DNA MER1_type 134 204 -5 364 284 149 7 chr20 51356854 51357002 -20796880 + MIR SINE MIR 84 252 -10 2188 103 0 10 chr20 51357114 51357416 -20796466 + AluSq SINE Alu 1 299 -14 276 211 0 53 chr20 51357428 51357504 -20796378 - L1MC5 LINE L1 -48 7913 7842 406 147 0 0 chr20 51357528 51357596 -20796286 - AluJb SINE Alu -5 307 240 1621 143 4 8 chr20 51357622 51357867 -20796015 - AluJb SINE Alu -68 244 1 541 231 141 0 chr20 51358530 51358686 -20795196 - MIR SINE MIR -7 255 78 289 298 95 25 chr20 51358717 51358875 -20795007 + MIR SINE MIR 65 233 -29 261 252 37 89 chr20 51359430 51359565 -20794317 + MIR SINE MIR 20 147 -115 556 303 16 43 chr20 51359723 51359838 -20794044 - MIR SINE MIR -68 194 84 1867 157 66 36 chr20 51359838 51360202 -20793680 + THE1C LTR MaLR 1 375 0 556 303 16 43 chr20 51360202 51360271 -20793611 - MIR SINE MIR -178 84 15 760 200 39 7 chr20 51360771 51360926 -20792956 - MLT1J2 LTR MaLR 0 505 346 898 247 97 21 chr20 51361033 51361312 -20792570 - MLT1J2 LTR MaLR -100 350 51 252 289 123 96 chr20 51361353 51361685 -20792197 + L2 LINE L2 2593 2933 -381 874 163 0 9 chr20 51361875 51362108 -20791774 + GA-rich Low_complexity Low_complexity 1 231 0 265 57 0 0 chr20 51362110 51362145 -20791737 + (GGAA)n Simple_repeat Simple_repeat 3 37 0 248 281 61 0 chr20 51362794 51362876 -20791006 + MIR SINE MIR 49 135 -73 467 277 13 32 chr20 51363045 51363200 -20790682 + MIR SINE MIR 35 186 -76 346 310 116 0 chr20 51363276 51363405 -20790477 + L2 LINE L2 3168 3311 -2 502 333 59 14 chr20 51363710 51363929 -20789953 + MIR SINE MIR 13 241 -21 366 257 79 36 chr20 51364474 51364614 -20789268 + MIR SINE MIR 68 213 -49 373 329 63 0 chr20 51364757 51364915 -20788967 - L2 LINE L2 -5 3267 3100 788 280 32 29 chr20 51365136 51365280 -20788602 - L1MC4a LINE L1 -1856 5952 5810 1099 131 79 65 chr20 51365280 51365494 -20788388 - MER20 DNA MER1_type -1 218 2 788 280 32 29 chr20 51365494 51365724 -20788158 - L1MC4a LINE L1 -1998 5810 5577 1505 252 57 14 chr20 51366089 51366530 -20787352 - L1ME1 LINE L1 0 6166 5707 24 0 0 0 chr20 51367171 51367195 -20786687 + GC_rich Low_complexity Low_complexity 1 24 0 400 288 25 0 chr20 51368060 51368178 -20785704 + MIR3 SINE MIR 39 159 -49 300 246 46 32 chr20 51369023 51369167 -20784715 + MIR SINE MIR 43 182 -62 247 268 62 0 chr20 51369623 51369720 -20784162 + MIR SINE MIR 43 145 -63 280 257 73 37 chr20 51369865 51369974 -20783908 + MIR3 SINE MIR 69 181 -27 422 305 90 18 chr20 51373118 51373285 -20780597 - MIR SINE MIR -20 242 64 488 256 73 7 chr20 51373900 51374037 -20779845 - L2 LINE L2 -6 3266 3121 504 218 158 30 chr20 51374884 51375049 -20778833 + MER5A DNA MER1_type 4 189 0 1090 272 171 12 chr20 51375092 51375519 -20778363 + MLT1K LTR MaLR 20 514 -74 332 185 157 19 chr20 51375587 51375695 -20778187 + MIR SINE MIR 103 225 -37 180 265 0 102 chr20 51375721 51375772 -20778110 - MIR SINE MIR -50 212 174 1895 134 0 49 chr20 51375772 51376100 -20777782 - AluSx SINE Alu 0 312 1 180 265 0 102 chr20 51376100 51376146 -20777736 - MIR SINE MIR -88 174 125 542 240 64 79 chr20 51377237 51377504 -20776378 - L2 LINE L2 0 3313 3051 558 241 95 0 chr20 51377706 51377864 -20776018 - MIR SINE MIR -21 241 69 1184 253 98 22 chr20 51377943 51378310 -20775572 + LTR16C LTR ERVL 97 491 0 202 311 0 0 chr20 51378320 51378381 -20775501 - MIR SINE MIR -200 62 2 2226 109 14 43 chr20 51378507 51378854 -20775028 - MER1B DNA MER1_type 0 337 1 257 286 14 0 chr20 51379401 51379471 -20774411 + MIR SINE MIR 69 139 -123 529 245 42 4 chr20 51379755 51379901 -20773981 + MIR SINE MIR 69 219 -43 1314 100 0 0 chr20 51380484 51380794 -20773088 + (TCCA)n Simple_repeat Simple_repeat 1 310 0 861 275 16 24 chr20 51381518 51381769 -20772113 - MIR SINE MIR -13 249 1 585 282 82 25 chr20 51381805 51382050 -20771832 + MIR SINE MIR 3 261 -1 207 0 0 0 chr20 51382050 51382073 -20771809 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 631 245 35 0 chr20 51382701 51382844 -20771038 - MER117 DNA MER1_type -43 154 7 216 268 36 80 chr20 51382846 51382958 -20770924 - L2 LINE L2 -248 3024 2918 312 319 82 43 chr20 51383065 51383272 -20770610 - L2 LINE L2 -678 2636 2422 1261 280 82 17 chr20 51383293 51383754 -20770128 + LTR16C LTR ERVL 1 491 0 275 295 77 0 chr20 51384030 51384108 -20769774 + MLT1L LTR MaLR 435 518 -97 994 214 22 27 chr20 51384139 51384363 -20769519 + MIR SINE MIR 20 242 -20 540 232 192 0 chr20 51384401 51384552 -20769330 - MER5A DNA MER1_type 0 189 10 211 269 15 30 chr20 51384773 51384840 -20769042 + L2 LINE L2 3243 3308 -5 210 250 67 0 chr20 51385302 51385362 -20768520 - MIR SINE MIR -4 258 195 808 238 78 9 chr20 51385446 51385677 -20768205 - MIR SINE MIR 0 262 16 183 326 0 0 chr20 51385812 51385861 -20768021 + MIR SINE MIR 99 147 -115 311 281 0 12 chr20 51385970 51386052 -20767830 - MIR SINE MIR -93 115 35 188 119 0 48 chr20 51386165 51386207 -20767675 + (TCC)n Simple_repeat Simple_repeat 3 42 0 184 245 51 82 chr20 51386347 51386445 -20767437 + MIR3 SINE MIR 12 106 -102 786 212 114 5 chr20 51386448 51386632 -20767250 + MER3 DNA MER1_type 1 204 -5 261 330 119 17 chr20 51386761 51386879 -20767003 + MIR3 SINE MIR 31 160 -48 297 274 62 18 chr20 51387102 51387215 -20766667 + MER5A DNA MER1_type 49 166 -23 676 196 70 100 chr20 51387401 51387630 -20766252 - MIR SINE MIR -5 257 36 257 250 33 0 chr20 51388248 51388308 -20765574 - MIR SINE MIR -6 256 195 848 225 9 65 chr20 51388313 51388544 -20765338 - MER20 DNA MER1_type 0 219 2 445 254 16 8 chr20 51388548 51388670 -20765212 + MIR SINE MIR 33 155 -107 607 287 66 38 chr20 51388707 51388996 -20764886 + L2 LINE L2 3004 3300 -13 348 219 73 44 chr20 51389015 51389152 -20764730 - MIR SINE MIR -75 187 47 200 200 0 0 chr20 51389585 51389635 -20764247 + (CA)n Simple_repeat Simple_repeat 1 50 0 3306 83 11 0 chr20 51390804 51391250 -20762632 + MLT2A2 LTR ERVL 1 451 -2 528 270 84 77 chr20 51391880 51392298 -20761584 + LTR16C LTR ERVL 71 491 0 1909 129 68 14 chr20 51392538 51392832 -20761050 + AluJb SINE Alu 1 310 -2 262 235 86 0 chr20 51393112 51393193 -20760689 + MIR SINE MIR 111 198 -64 737 236 48 44 chr20 51393283 51393512 -20760370 - MIR SINE MIR -15 247 18 481 252 103 23 chr20 51393965 51394179 -20759703 - MIR SINE MIR -18 244 14 368 263 170 41 chr20 51394808 51394935 -20758947 - MIR3 SINE MIR -6 202 46 1764 158 54 0 chr20 51394935 51395214 -20758668 + AluJo SINE Alu 1 294 -18 368 263 170 41 chr20 51395214 51395257 -20758625 - MIR3 SINE MIR -162 46 10 673 197 0 15 chr20 51395293 51395430 -20758452 + MIR SINE MIR 2 136 -126 289 343 56 15 chr20 51395431 51395629 -20758253 + L2 LINE L2 2628 2833 -481 2069 228 34 39 chr20 51395778 51396343 -20757539 - L1ME3A LINE L1 -5 6165 5604 445 265 80 12 chr20 51396697 51396859 -20757023 + MER104 DNA MER2_type 4 176 -4 421 280 101 16 chr20 51397082 51397271 -20756611 - MIR SINE MIR -12 250 46 290 260 80 73 chr20 51397544 51397694 -20756188 - L2 LINE L2 -2 3311 3161 248 336 98 28 chr20 51397694 51397837 -20756045 - L2 LINE L2 -2 3270 3118 453 257 62 50 chr20 51398549 51398728 -20755154 + MIR SINE MIR 18 198 -64 634 194 68 78 chr20 51398737 51398816 -20755066 - MLT1I LTR MaLR -19 390 312 1957 135 7 43 chr20 51398816 51399119 -20754763 - AluSx SINE Alu -20 292 1 634 194 68 78 chr20 51399119 51399230 -20754652 - MLT1I LTR MaLR -97 312 202 317 241 26 60 chr20 51399586 51399702 -20754180 - MIR SINE MIR -86 176 65 2179 175 42 57 chr20 51399704 51399882 -20754000 + L1MB7 LINE L1 5655 5834 -350 2324 113 6 3 chr20 51399882 51400193 -20753689 + AluSx SINE Alu 1 312 0 2179 175 42 57 chr20 51400193 51400539 -20753343 + L1MB7 LINE L1 5834 6171 -13 218 293 0 49 chr20 51401236 51401318 -20752564 - L3b LINE CR1 -227 1356 1279 556 233 167 0 chr20 51401436 51401586 -20752296 - MER5A DNA MER1_type -6 183 9 1674 140 93 14 chr20 51401763 51402042 -20751840 - AluJb SINE Alu -1 311 11 465 272 52 7 chr20 51402134 51402270 -20751612 + MIR3 SINE MIR 19 160 -48 490 233 69 75 chr20 51402272 51402431 -20751451 + MER117 DNA MER1_type 3 160 -37 338 281 96 15 chr20 51403004 51403139 -20750743 - L2 LINE L2 -1 3271 3126 212 371 60 0 chr20 51403206 51403322 -20750560 + L2 LINE L2 3145 3267 -5 219 69 0 0 chr20 51403389 51403418 -20750464 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 369 296 6 51 chr20 51403424 51403600 -20750282 - L2 LINE L2 -17 3296 3129 426 217 123 0 chr20 51403635 51403773 -20750109 - L2 LINE L2 -340 2974 2820 182 171 24 0 chr20 51403840 51403881 -20750001 + (ATG)n Simple_repeat Simple_repeat 2 43 0 584 306 123 1 chr20 51403881 51404116 -20749766 - MIR SINE MIR 0 262 3 597 235 36 18 chr20 51404476 51404662 -20749220 - MIR SINE MIR -67 195 6 200 158 0 0 chr20 51404695 51404733 -20749149 - MIR SINE MIR -90 118 81 916 180 79 0 chr20 51404747 51404925 -20748957 - MER3 DNA MER1_type -17 192 1 1581 181 43 4 chr20 51405036 51405312 -20748570 + AluJo SINE Alu 5 291 -21 225 288 38 0 chr20 51405396 51405476 -20748406 + L2 LINE L2 3231 3313 0 422 271 34 8 chr20 51405571 51405689 -20748193 - MIR SINE MIR -76 186 66 2000 86 4 0 chr20 51405831 51406087 -20747795 - AluY SINE Alu -4 307 51 1508 195 17 30 chr20 51406102 51406404 -20747478 - AluJo SINE Alu -14 298 1 214 314 105 40 chr20 51406434 51406558 -20747324 + L3 LINE CR1 1371 1502 -75 301 302 63 2 chr20 51406596 51406753 -20747129 - MER5A DNA MER1_type 0 189 4 285 349 135 12 chr20 51406944 51407196 -20746686 + L2 LINE L2 2976 3258 -14 669 288 92 0 chr20 51407901 51408085 -20745797 + MIR SINE MIR 61 261 -1 203 303 146 0 chr20 51408652 51408741 -20745141 + L2 LINE L2 3170 3271 -1 472 309 62 37 chr20 51408777 51408837 -20745045 + MIR SINE MIR 13 70 -192 2350 105 3 0 chr20 51408837 51409133 -20744749 - AluSp SINE Alu -16 297 1 472 309 62 37 chr20 51409133 51409315 -20744567 + MIR SINE MIR 70 261 -1 312 317 122 0 chr20 51409429 51409552 -20744330 + MER91A DNA MER1_type 24 161 -35 212 340 0 0 chr20 51409604 51409651 -20744231 + MER91A DNA MER1_type 130 176 -14 921 216 110 16 chr20 51409740 51409994 -20743888 - MER115 DNA AcHobo -1 692 415 568 307 160 11 chr20 51410035 51410322 -20743560 - MER115 DNA AcHobo -358 335 6 1866 168 3 3 chr20 51410329 51410621 -20743261 + AluJo SINE Alu 1 292 -20 25 0 0 0 chr20 51410983 51411008 -20742874 + AT_rich Low_complexity Low_complexity 1 25 0 383 219 115 0 chr20 51411667 51411763 -20742119 - MIR SINE MIR 0 262 156 605 228 48 63 chr20 51411782 51411895 -20741987 + MIR SINE MIR 31 141 -121 2341 83 10 0 chr20 51411895 51412185 -20741697 + AluY SINE Alu 1 293 -18 605 228 48 63 chr20 51412185 51412260 -20741622 + MIR SINE MIR 141 216 -46 301 289 21 0 chr20 51412418 51412515 -20741367 - L1ME4a LINE L1 -25 6096 5998 259 246 31 0 chr20 51412934 51412999 -20740883 + GA-rich Low_complexity Low_complexity 1 67 0 249 268 77 66 chr20 51413060 51413243 -20740639 - L2 LINE L2 -88 3184 3000 986 228 108 66 chr20 51413518 51413716 -20740166 + LTR16C LTR ERVL 64 283 -208 1141 203 9 0 chr20 51413716 51413938 -20739944 + MER58A DNA MER1_type 1 224 0 986 228 108 66 chr20 51413938 51414072 -20739810 + LTR16C LTR ERVL 283 410 -81 350 279 66 16 chr20 51414425 51414547 -20739335 - MIR SINE MIR -57 151 24 406 301 68 18 chr20 51414811 51414974 -20738908 + MIR SINE MIR 1 171 -91 1000 254 131 16 chr20 51415068 51415450 -20738432 + LTR16A1 LTR ERVL 4 429 -28 2277 118 0 0 chr20 51415562 51415858 -20738024 + AluSx SINE Alu 1 296 -16 765 219 93 32 chr20 51416427 51416673 -20737209 - MIR SINE MIR 0 262 2 187 234 39 104 chr20 51417231 51417308 -20736574 - MIR3 SINE MIR -27 181 110 263 277 181 17 chr20 51417558 51417735 -20736147 - MIR SINE MIR -46 216 11 716 183 50 56 chr20 51418477 51418657 -20735225 + MER5A DNA MER1_type 1 179 -10 645 311 14 18 chr20 51418792 51419011 -20734871 - MIR SINE MIR -25 237 20 195 340 132 0 chr20 51419204 51419310 -20734572 + MIR3 SINE MIR 15 134 -74 1097 249 126 28 chr20 51419339 51419800 -20734082 + L2 LINE L2 2808 3313 0 464 272 70 25 chr20 51419784 51419942 -20733940 + MIR3 SINE MIR 16 180 -28 * 295 252 119 73 chr20 51420596 51420747 -20733135 + MIR SINE MIR 33 190 -72 206 236 193 28 chr20 51420784 51420915 -20732967 - MIR SINE MIR -61 147 46 1764 163 3 24 chr20 51421559 51421875 -20732007 + AluJb SINE Alu 1 310 0 237 250 0 0 chr20 51423193 51423245 -20730637 - MIR SINE MIR -1 261 210 766 282 37 29 chr20 51423262 51423507 -20730375 + MIR SINE MIR 6 252 -10 188 241 17 35 chr20 51423507 51423565 -20730317 - MIR SINE MIR -89 173 117 215 318 30 0 chr20 51424540 51424606 -20729276 + MIR SINE MIR 28 95 -113 231 224 0 0 chr20 51424607 51424656 -20729226 + L1MC4 LINE L1 6658 6706 -1336 213 108 0 0 chr20 51424667 51424704 -20729178 + (CA)n Simple_repeat Simple_repeat 1 37 0 196 250 15 59 chr20 51424704 51424761 -20729121 + MIR3 SINE MIR 125 180 -28 187 161 89 18 chr20 51425117 51425173 -20728709 + MIR SINE MIR 97 156 -106 429 267 75 0 chr20 51425662 51425782 -20728100 - MIR SINE MIR -62 146 18 22 0 0 0 chr20 51426813 51426835 -20727047 + GC_rich Low_complexity Low_complexity 1 22 0 210 37 0 0 chr20 51426836 51426863 -20727019 + (CGG)n Simple_repeat Simple_repeat 1 27 0 45 69 0 0 chr20 51426905 51426992 -20726890 + GC_rich Low_complexity Low_complexity 1 87 0 345 47 0 0 chr20 51427034 51427077 -20726805 + (CGG)n Simple_repeat Simple_repeat 2 44 0 209 337 11 6 chr20 51427473 51427648 -20726234 + (CA)n Simple_repeat Simple_repeat 1 176 0 251 323 38 2 chr20 51428300 51428433 -20725449 + MIR SINE MIR 41 146 -62 2100 214 76 17 chr20 51428454 51429058 -20724824 - MLT1E2 LTR MaLR -1 625 1 659 231 50 0 chr20 51429176 51429336 -20724546 + L2 LINE L2 2391 2558 -756 697 270 106 13 chr20 51429346 51429679 -20724203 + L2 LINE L2 2751 3166 -147 213 255 0 0 chr20 51429685 51429732 -20724150 + (TA)n Simple_repeat Simple_repeat 2 48 0 226 307 0 23 chr20 51429735 51429823 -20724059 + L1MC4 LINE L1 6617 6702 -1340 287 250 0 0 chr20 51429874 51429942 -20723940 + L2 LINE L2 3246 3313 0 * 312 246 54 69 chr20 51429931 51430061 -20723821 - MIR SINE MIR -65 197 70 2407 86 3 3 chr20 51430087 51430390 -20723492 + AluSq SINE Alu 1 303 -10 231 281 0 16 chr20 51430397 51430461 -20723421 - L2 LINE L2 -195 3077 3015 209 282 197 69 chr20 51430836 51430927 -20722955 + MIR SINE MIR 38 116 -146 2203 136 0 3 chr20 51430927 51431236 -20722646 + AluSx SINE Alu 1 308 -4 209 282 197 69 chr20 51431236 51431332 -20722550 + MIR SINE MIR 116 249 -13 * 304 349 40 27 chr20 51431321 51431470 -20722412 - L2 LINE L2 -8 3305 3155 279 0 0 0 chr20 51431568 51431599 -20722283 + (TG)n Simple_repeat Simple_repeat 2 32 0 683 164 0 9 chr20 51431615 51431731 -20722151 - FLAM_C SINE Alu -27 116 2 2197 122 0 3 chr20 51431987 51432291 -20721591 + AluSx SINE Alu 1 303 -9 285 98 0 0 chr20 51432901 51432942 -20720940 + (TG)n Simple_repeat Simple_repeat 2 42 0 291 130 0 0 chr20 51433623 51433677 -20720205 + (TCCC)n Simple_repeat Simple_repeat 3 56 0 494 241 96 48 chr20 51433686 51433873 -20720009 + MIR SINE MIR 67 262 0 428 232 30 24 chr20 51434499 51434663 -20719219 + (CAGAGA)n Simple_repeat Simple_repeat 2 166 0 256 237 0 0 chr20 51434773 51434832 -20719050 + (CA)n Simple_repeat Simple_repeat 2 60 0 281 269 82 44 chr20 51434897 51435053 -20718829 + MIR SINE MIR 50 216 -46 2290 110 3 0 chr20 51435232 51435540 -20718342 - AluSc SINE Alu 0 309 1 1025 266 88 62 chr20 51435577 51436224 -20717658 + L1MC4a LINE L1 5261 5924 -1884 473 276 26 45 chr20 51436856 51437012 -20716870 + MIR3 SINE MIR 36 188 -20 643 277 80 5 chr20 51437020 51437233 -20716649 + MIR SINE MIR 33 261 -1 2032 123 7 0 chr20 51437414 51437691 -20716191 + AluSx SINE Alu 4 282 -30 198 0 0 0 chr20 51437693 51437715 -20716167 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 1982 139 13 16 chr20 51438202 51438511 -20715371 - AluSx SINE Alu -4 308 1 2246 123 0 0 chr20 51438931 51439231 -20714651 - AluSx SINE Alu -12 300 1 793 285 76 45 chr20 51439274 51439378 -20714504 - L2 LINE L2 -38 3275 3176 1015 46 61 0 chr20 51439378 51439509 -20714373 - MER85 DNA T2_type 0 139 1 793 285 76 45 chr20 51439509 51439849 -20714033 - L2 LINE L2 -137 3176 2817 1959 157 13 0 chr20 51439892 51440197 -20713685 - AluJb SINE Alu -3 309 1 797 243 55 52 chr20 51440199 51440528 -20713354 + MER113 DNA MER1_type? 41 370 -151 432 236 36 9 chr20 51440581 51440691 -20713191 + MER81 DNA DNA 2 114 0 1744 241 68 43 chr20 51440765 51441343 -20712539 + MLT1E LTR MaLR 1 592 -1 2055 108 32 123 chr20 51441377 51441452 -20712430 - THE1B LTR MaLR 0 364 284 2004 135 7 10 chr20 51441452 51441741 -20712141 - AluSx SINE Alu -24 288 1 2055 108 32 123 chr20 51441741 51442065 -20711817 - THE1B LTR MaLR -80 284 1 323 191 53 38 chr20 51442617 51442748 -20711134 - L1ME4a LINE L1 -11 6110 5978 515 306 117 28 chr20 51442781 51443140 -20710742 - L1ME4a LINE L1 -206 5915 5525 764 120 43 0 chr20 51443248 51443365 -20710517 - AluSp/q SINE Alu -8 305 184 640 284 142 0 chr20 51443579 51443797 -20710085 + MER112 DNA MER1_type 1 249 -11 447 274 118 41 chr20 51443836 51444529 -20709353 - L1P4 LINE L1 -585 5581 4791 205 75 50 0 chr20 51444883 51444923 -20708959 + (TTTG)n Simple_repeat Simple_repeat 2 43 0 867 79 61 9 chr20 51444925 51445039 -20708843 - AluSq/x SINE Alu -187 125 6 1683 158 0 50 chr20 51445055 51445358 -20708524 - AluJo SINE Alu -24 288 1 1348 157 74 0 chr20 51445615 51445826 -20708056 - Tigger2 DNA MER2_type -1 2717 2484 1860 164 0 16 chr20 51445826 51446143 -20707739 + AluJb SINE Alu 1 312 0 1348 157 74 0 chr20 51446143 51446173 -20707709 - Tigger2 DNA MER2_type -234 2484 2458 4326 141 21 51 chr20 51446229 51446621 -20707261 - Tigger2 DNA MER2_type -1972 746 387 761 209 85 0 chr20 51446621 51446774 -20707108 - FAM SINE Alu -9 166 1 4326 141 21 51 chr20 51446774 51447147 -20706735 - Tigger2 DNA MER2_type -2331 387 4 686 120 0 8 chr20 51447779 51447896 -20705986 + (TTCC)n Simple_repeat Simple_repeat 1 116 0 1054 263 72 49 chr20 51447904 51448092 -20705790 + L1ME4a LINE L1 5496 5678 -484 623 269 59 35 chr20 51448092 51448348 -20705534 - MIR SINE MIR 0 262 1 1054 263 72 49 chr20 51448348 51448677 -20705205 + L1ME4a LINE L1 5678 6010 -152 207 0 0 0 chr20 51448815 51448838 -20705044 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 903 123 0 36 chr20 51448930 51449068 -20704814 - FLAM_A SINE Alu 0 133 1 234 196 0 0 chr20 51449746 51449792 -20704090 + HAL1b LINE L1 613 658 -690 23 0 0 0 chr20 51449854 51449877 -20704005 + AT_rich Low_complexity Low_complexity 1 23 0 480 269 128 44 chr20 51449948 51450197 -20703685 + MLT1J LTR MaLR 30 299 -212 2323 103 0 3 chr20 51450354 51450655 -20703227 - AluSq SINE Alu -12 301 2 881 230 170 25 chr20 51450682 51451087 -20702795 + HAL1b LINE L1 792 1255 -93 2447 199 17 30 chr20 51451104 51451641 -20702241 - L1MD3 LINE L1 -8 7987 7458 241 186 0 0 chr20 51451643 51451702 -20702180 + HAL1b LINE L1 1275 1333 -15 373 278 153 0 chr20 51452079 51452223 -20701659 - MIR SINE MIR -21 241 76 264 239 30 0 chr20 51452622 51452689 -20701193 + GA-rich Low_complexity Low_complexity 2 70 0 258 216 0 0 chr20 51452773 51452824 -20701058 + MLT1K LTR MaLR 519 569 -19 348 220 102 34 chr20 51453754 51453872 -20700010 - L2 LINE L2 0 3313 3188 303 273 116 33 chr20 51453900 51454021 -20699861 - MIR SINE MIR -126 136 6 257 311 29 10 chr20 51454266 51454369 -20699513 + LTR67 LTR ERVL 436 540 -17 945 237 74 96 chr20 51454923 51455371 -20698511 - MLT1J LTR MaLR -73 438 1 2287 114 0 0 chr20 51455578 51455876 -20698006 - AluSx SINE Alu -14 298 1 317 250 0 12 chr20 51455945 51456025 -20697857 + MIR SINE MIR 36 114 -148 424 251 15 36 chr20 51456110 51456249 -20697633 - MIR SINE MIR -57 151 29 1786 154 118 108 chr20 51456552 51456624 -20697258 - MLT1D LTR MaLR 0 505 435 1874 146 22 32 chr20 51456624 51456939 -20696943 - AluJo SINE Alu 0 312 1 1786 154 118 108 chr20 51456939 51457366 -20696516 - MLT1D LTR MaLR -70 435 1 3116 100 114 10 chr20 51457432 51457930 -20695952 + LTR43 LTR ERV1 1 550 -52 1319 43 0 106 chr20 51457937 51458082 -20695800 - MER75B DNA T2_type -269 235 117 2075 138 3 10 chr20 51458082 51458394 -20695488 - AluSx SINE Alu 0 312 3 1319 43 0 106 chr20 51458394 51458455 -20695427 - MER75B DNA T2_type -387 117 51 855 109 82 3 chr20 51459081 51459269 -20694613 - MER75 DNA T2_type -250 264 1 1890 99 95 0 chr20 51459296 51459559 -20694323 - AluSx SINE Alu -24 288 1 385 107 0 0 chr20 51459561 51459617 -20694265 + LTR43 LTR ERV1 547 602 0 362 273 31 55 chr20 51459618 51459653 -20694229 - MIR SINE MIR -105 157 123 1268 154 173 110 chr20 51459653 51460005 -20693877 - MLT1D LTR MaLR -2 503 112 1687 163 27 17 chr20 51460005 51460306 -20693576 - AluJb SINE Alu -7 305 2 1268 154 173 110 chr20 51460306 51460426 -20693456 - MLT1D LTR MaLR -393 112 1 362 273 31 55 chr20 51460426 51460518 -20693364 - MIR SINE MIR -139 123 33 359 265 0 90 chr20 51460577 51460743 -20693139 - MIR SINE MIR -67 195 45 1898 167 6 6 chr20 51460757 51461068 -20692814 + AluJb SINE Alu 1 311 -1 201 39 0 0 chr20 51461084 51461110 -20692772 + (GA)n Simple_repeat Simple_repeat 2 27 0 2042 133 10 0 chr20 51461181 51461490 -20692392 + AluSp SINE Alu 1 312 -1 604 228 221 14 chr20 51461528 51461804 -20692078 + L2 LINE L2 2966 3298 -15 1859 152 0 13 chr20 51462009 51462311 -20691571 + AluJb SINE Alu 1 298 -14 526 267 0 8 chr20 51462317 51462448 -20691434 - MER5B DNA MER1_type -38 140 11 358 230 14 0 chr20 51462510 51462584 -20691298 - MER5B DNA MER1_type -41 137 63 692 213 51 14 chr20 51462585 51462794 -20691088 - L1M4c LINE L1 -5273 1007 853 2483 58 0 42 chr20 51462794 51463107 -20690775 - AluY SINE Alu -11 300 1 5365 100 42 7 chr20 51463120 51463891 -20689991 + HSMAR2 DNA Mariner 502 1299 -3 304 248 225 0 chr20 51463931 51464060 -20689822 + HAL1b LINE L1 1191 1348 0 189 0 0 0 chr20 51464179 51464200 -20689682 + (TAA)n Simple_repeat Simple_repeat 2 22 0 1693 233 60 2 chr20 51464309 51464755 -20689127 - Charlie4a DNA MER1_type -5 503 32 678 270 118 19 chr20 51464891 51465102 -20688780 - HAL1 LINE L1 -1653 854 623 1082 147 35 0 chr20 51465133 51465303 -20688579 - AluJb SINE Alu -4 308 133 380 274 19 0 chr20 51465421 51465527 -20688355 - HAL1 LINE L1 -1932 575 468 824 147 53 142 chr20 51465541 51465615 -20688267 - MER3 DNA MER1_type -4 205 126 1979 114 0 8 chr20 51465615 51465900 -20687982 + AluSx SINE Alu 22 304 0 824 147 53 142 chr20 51465900 51466048 -20687834 - MER3 DNA MER1_type -83 126 1 737 238 175 0 chr20 51466058 51466247 -20687635 - MER58A DNA MER1_type -2 222 1 237 180 40 0 chr20 51466258 51466308 -20687574 - HAL1 LINE L1 -2407 100 49 328 344 23 0 chr20 51466373 51466504 -20687378 + L2 LINE L2 3139 3272 0 602 222 42 48 chr20 51466991 51467180 -20686702 + L1ME3 LINE L1 5969 6156 -6 4635 138 9 19 chr20 51467199 51467983 -20685899 + L1MB3 LINE L1 5406 6181 -2 23 0 0 0 chr20 51467988 51468011 -20685871 + AT_rich Low_complexity Low_complexity 1 23 0 729 187 17 152 chr20 51468572 51468644 -20685238 - MIR SINE MIR -5 257 177 2154 128 0 10 chr20 51468644 51468950 -20684932 + AluSx SINE Alu 1 303 -9 729 187 17 152 chr20 51468950 51469166 -20684716 - MIR SINE MIR -85 177 8 1149 166 33 173 chr20 51469213 51469378 -20684504 - MLT1A2 LTR MaLR -6 368 298 2042 149 0 0 chr20 51469378 51469673 -20684209 - AluSx SINE Alu -17 295 1 1149 166 33 173 chr20 51469673 51469935 -20683947 - MLT1A2 LTR MaLR -76 298 1 1739 276 117 21 chr20 51470172 51470882 -20683000 + L1MEc LINE L1 34 811 -5585 1183 200 47 94 chr20 51470886 51471246 -20682636 + MLT1A1 LTR MaLR 23 365 0 2137 114 3 7 chr20 51471257 51471547 -20682335 + AluSx SINE Alu 1 289 -23 1567 258 29 20 chr20 51471604 51472194 -20681688 + L1MEc LINE L1 866 1460 -4936 2809 3 0 3 chr20 51472199 51472498 -20681384 + AluYa5 SINE Alu 14 311 0 540 193 14 48 chr20 51472521 51472666 -20681216 + L1ME1 LINE L1 6022 6161 -5 202 274 0 20 chr20 51472688 51472739 -20681143 + GA-rich Low_complexity Low_complexity 4 53 0 336 209 76 19 chr20 51473007 51473112 -20680770 - MIR SINE MIR 0 262 152 1148 166 0 0 chr20 51473112 51473293 -20680589 + LTR45B LTR ERV1 3 183 -306 344 180 0 16 chr20 51473291 51473352 -20680530 + AluJo SINE Alu 68 127 -175 * 1110 77 12 6 chr20 51473356 51473524 -20680358 + (GAA)n Simple_repeat Simple_repeat 1 169 0 180 200 0 0 chr20 51473524 51473564 -20680318 + G-rich Low_complexity Low_complexity 4 43 0 1360 188 24 21 chr20 51473578 51473866 -20680016 + LTR45B LTR ERV1 200 488 -1 441 264 0 8 chr20 51473867 51473988 -20679894 - MIR SINE MIR -110 152 33 534 249 32 43 chr20 51474383 51474568 -20679314 + L1ME3A LINE L1 5902 6084 -86 2489 69 7 0 chr20 51474586 51474890 -20678992 + AluSp SINE Alu 1 306 -7 1173 135 0 0 chr20 51474892 51475055 -20678827 + AluJo SINE Alu 131 293 -19 665 244 42 23 chr20 51475134 51475351 -20678531 + HAL1 LINE L1 1433 1653 -854 721 280 87 40 chr20 51475490 51475676 -20678206 - MLT1I LTR MaLR -13 396 220 321 26 0 0 chr20 51475676 51475714 -20678168 + (TG)n Simple_repeat Simple_repeat 1 38 0 721 280 87 40 chr20 51475714 51475873 -20678009 - MLT1I LTR MaLR -189 220 35 2173 99 0 3 chr20 51476021 51476336 -20677546 - AluSx SINE Alu 0 314 1 2046 140 82 20 chr20 51476521 51476540 -20677342 - MLT1A1 LTR MaLR -2 363 347 1943 171 89 20 chr20 51476540 51476944 -20676938 + MSTB1 LTR MaLR 1 432 0 2046 140 82 20 chr20 51476944 51477266 -20676616 - MLT1A1 LTR MaLR -18 347 1 1900 112 48 0 chr20 51477347 51477639 -20676243 - AluSg SINE Alu 0 305 1 2176 121 3 0 chr20 51477691 51477980 -20675902 + AluSx SINE Alu 2 291 -21 313 321 7 29 chr20 51477986 51478123 -20675759 + MIR SINE MIR 100 233 -29 197 274 55 14 chr20 51478263 51478336 -20675546 - MIR SINE MIR -108 100 25 548 252 120 74 chr20 51479103 51479412 -20674470 + Charlie8 DNA MER1_type 45 367 -2050 277 293 0 0 chr20 51479415 51479493 -20674389 + Charlie8 DNA MER1_type 1349 1417 -1000 1678 159 16 44 chr20 51479526 51479841 -20674041 + AluJb SINE Alu 1 306 -6 198 220 0 51 chr20 51479863 51479922 -20673960 + L2 LINE L2 3241 3296 -17 534 259 24 49 chr20 51479999 51480204 -20673678 + LTR4 LTR ERV1 1 200 -396 772 238 43 53 chr20 51480378 51480660 -20673222 + LTR4 LTR ERV1 318 596 0 2764 93 3 8 chr20 51480916 51481282 -20672600 - THE1B LTR MaLR 0 364 1 256 110 165 99 chr20 51481351 51481442 -20672440 - MLT1K LTR MaLR -2 586 490 401 297 0 0 chr20 51481461 51481589 -20672293 - MIR SINE MIR -26 236 109 626 58 47 0 chr20 51482009 51482095 -20671787 + MLT2A2 LTR ERVL 364 453 0 263 337 0 0 chr20 51482119 51482205 -20671677 - MIR SINE MIR -124 138 53 250 256 154 0 chr20 51482306 51482423 -20671459 - HAL1b LINE L1 -14 1334 1200 2089 150 0 3 chr20 51482728 51483062 -20670820 + AluSx SINE Alu 1 333 0 2345 106 3 0 chr20 51483937 51484248 -20669634 + AluSx SINE Alu 1 312 0 316 253 63 0 chr20 51484493 51484572 -20669310 - MIR SINE MIR -18 244 161 981 155 107 0 chr20 51484578 51484746 -20669136 + MER6B DNA MER2_type 2 187 -23 203 319 0 78 chr20 51484758 51484874 -20669008 - MIR SINE MIR -75 133 27 349 301 19 0 chr20 51484880 51484983 -20668899 - LTR16A LTR ERVL 0 450 346 331 277 10 10 chr20 51485097 51485198 -20668684 - LTR16A1 LTR ERVL -356 101 1 2176 121 0 13 chr20 51485512 51485826 -20668056 + AluSx SINE Alu 1 310 -2 29 0 0 0 chr20 51485851 51485880 -20668002 + AT_rich Low_complexity Low_complexity 1 29 0 898 266 73 30 chr20 51486008 51486278 -20667604 + MLT1I LTR MaLR 12 320 -89 2043 147 0 3 chr20 51486278 51486584 -20667298 + AluJb SINE Alu 1 305 -7 898 266 73 30 chr20 51486584 51486676 -20667206 + MLT1I LTR MaLR 320 407 -2 2290 85 0 0 chr20 51486894 51487176 -20666706 - AluSx SINE Alu -21 291 10 303 150 12 75 chr20 51487532 51487612 -20666270 + LTR33A LTR ERVL 423 497 -26 622 214 58 66 chr20 51487635 51487892 -20665990 + HAL1 LINE L1 1098 1352 -1155 377 227 65 71 chr20 51487907 51488061 -20665821 + L1MC5 LINE L1 7246 7398 -563 2257 125 0 0 chr20 51488061 51488372 -20665510 + AluSx SINE Alu 1 311 -1 1001 233 4 33 chr20 51488373 51488613 -20665269 + MLT1E2 LTR MaLR 387 619 -7 587 273 5 24 chr20 51488617 51488826 -20665056 + HAL1 LINE L1 1995 2199 -308 1730 139 54 7 chr20 51488832 51489127 -20664755 + AluJb SINE Alu 1 309 -3 2452 71 3 0 chr20 51489380 51489676 -20664206 + AluSp SINE Alu 1 297 -16 245 120 20 40 chr20 51489895 51489945 -20663937 + HAL1 LINE L1 2262 2310 -197 910 112 0 8 chr20 51489957 51490091 -20663791 - AluSp/q SINE Alu -6 307 175 543 212 86 40 chr20 51490123 51490321 -20663561 + HAL1 LINE L1 2301 2507 0 577 167 29 0 chr20 51490427 51490529 -20663353 - MER104 DNA Tc2 -75 105 1 699 144 0 10 chr20 51490546 51490650 -20663232 - FRAM SINE Alu -19 157 55 3656 215 69 40 chr20 51490650 51491181 -20662701 + L1MC2 LINE L1 93 669 -5376 2279 93 0 0 chr20 51491181 51491491 -20662391 + AluSc SINE Alu 1 310 0 3656 215 69 40 chr20 51491491 51491952 -20661930 + L1MC2 LINE L1 669 1115 -4930 1212 75 7 0 chr20 51491952 51492098 -20661784 + AluSq/x SINE Alu 1 147 -165 10127 205 48 45 chr20 51492098 51492292 -20661590 + L1MC2 LINE L1 2751 2943 -3819 2263 78 3 3 chr20 51492292 51492618 -20661264 - AluY SINE Alu 0 326 1 10127 205 48 45 chr20 51492618 51493366 -20660516 + L1MC2 LINE L1 2943 3688 -3074 2321 87 11 0 chr20 51493366 51493653 -20660229 + AluSc SINE Alu 1 290 -19 10127 205 48 45 chr20 51493653 51495378 -20658504 + L1MC2 LINE L1 3688 3392 -3370 1158 147 78 121 chr20 51495378 51495703 -20658179 + LTR56 LTR ERV1 1 302 -143 2337 103 3 0 chr20 51495703 51496004 -20657878 - AluSx SINE Alu -10 302 1 1158 147 78 121 chr20 51496004 51496141 -20657741 + LTR56 LTR ERV1 302 443 -2 10127 205 48 45 chr20 51496141 51496662 -20657220 + L1MC2 LINE L1 3392 3910 -2852 1921 129 11 24 chr20 51496662 51496894 -20656988 - AluSq SINE Alu 0 353 125 200 59 29 0 chr20 51496894 51496928 -20656954 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1921 129 11 24 chr20 51496928 51497052 -20656830 - AluSq SINE Alu -228 125 1 2406 84 0 0 chr20 51497052 51497349 -20656533 - AluSc SINE Alu -11 298 2 2327 122 0 6 chr20 51497355 51497676 -20656206 - 7SLRNA srpRNA srpRNA -1 319 1 10127 205 48 45 chr20 51497676 51497857 -20656025 + L1MC2 LINE L1 3914 4093 -2669 1664 221 51 20 chr20 51497857 51498306 -20655576 - MLT1C LTR MaLR -2 465 3 10127 205 48 45 chr20 51498306 51498319 -20655563 + L1MC2 LINE L1 4093 4104 -2658 2103 133 10 0 chr20 51498319 51498613 -20655269 + AluSx SINE Alu 1 297 -15 10127 205 48 45 chr20 51498613 51498765 -20655117 + L1MC2 LINE L1 4104 4254 -2508 2053 149 10 3 chr20 51498765 51499074 -20654808 + AluJb SINE Alu 2 312 0 10127 205 48 45 chr20 51499074 51499509 -20654373 + L1MC2 LINE L1 4254 6749 -13 922 129 0 0 chr20 51499509 51499633 -20654249 + FLAM_C SINE Alu 1 124 -19 219 255 31 122 chr20 51499687 51499785 -20654097 + L2 LINE L2 3018 3106 -166 650 270 95 49 chr20 51500254 51500517 -20653365 - MER102a DNA MER1_type 0 330 56 311 331 146 0 chr20 51500815 51500945 -20652937 + L2 LINE L2 3124 3272 0 2042 115 29 0 chr20 51501009 51501288 -20652594 + AluSx SINE Alu 1 287 -25 261 0 0 0 chr20 51501291 51501320 -20652562 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 956 174 0 0 chr20 51501466 51501621 -20652261 - FRAM SINE Alu -11 155 1 358 316 0 35 chr20 51501977 51502151 -20651731 + C-rich Low_complexity Low_complexity 4 171 0 255 221 0 0 chr20 51502259 51502345 -20651537 + (CCG)n Simple_repeat Simple_repeat 2 87 0 21 57 0 0 chr20 51502434 51502469 -20651413 + GC_rich Low_complexity Low_complexity 1 35 0 207 284 69 35 chr20 51504255 51504371 -20649511 + MIR SINE MIR 16 135 -73 762 226 59 32 chr20 51504832 51505053 -20648829 - MIR SINE MIR 0 262 36 345 278 215 0 chr20 51506441 51506585 -20647297 + MIR SINE MIR 20 194 -68 2465 88 0 0 chr20 51507042 51507350 -20646532 - AluSg SINE Alu -2 308 1 184 293 35 60 chr20 51507606 51507666 -20646216 - MIR SINE MIR -54 208 151 1973 96 68 7 chr20 51507666 51507946 -20645936 - AluSx SINE Alu -15 297 1 184 293 35 60 chr20 51507946 51508001 -20645881 - MIR SINE MIR -111 151 96 182 211 0 0 chr20 51509011 51509049 -20644833 + L2 LINE L2 3180 3217 -96 234 206 183 40 chr20 51509959 51510085 -20643797 - L1ME4a LINE L1 -12 6109 5966 2281 96 13 7 chr20 51510236 51510538 -20643344 - AluSq SINE Alu -9 304 1 228 246 98 16 chr20 51511278 51511339 -20642543 - MIR SINE MIR -78 184 119 1693 179 21 0 chr20 51512017 51512308 -20641574 - AluJo SINE Alu -15 297 1 397 196 126 35 chr20 51512665 51512808 -20641074 - Charlie5 DNA MER1_type -27 2585 2430 343 131 82 0 chr20 51512806 51512867 -20641015 - Charlie5 DNA MER1_type -2542 70 5 * 216 313 78 35 chr20 51512867 51512982 -20640900 - L2 LINE L2 -219 3053 2934 311 239 15 0 chr20 51514131 51514198 -20639684 + MER2 DNA MER2_type 3 70 -275 358 224 13 0 chr20 51514211 51514287 -20639595 + MER2 DNA MER2_type 268 344 -1 630 296 28 77 chr20 51514330 51514682 -20639200 - MLT1I LTR MaLR -8 401 67 2238 108 7 0 chr20 51515039 51515346 -20638536 - AluY SINE Alu -1 310 2 1987 130 18 0 chr20 51515376 51515661 -20638221 + AluSx SINE Alu 1 290 -22 2106 138 0 6 chr20 51515737 51516049 -20637833 + AluSx SINE Alu 1 310 -2 1238 179 4 49 chr20 51516588 51516834 -20637048 - AluJo SINE Alu -11 301 67 296 279 25 74 chr20 51516886 51517008 -20636874 - MIR3 SINE MIR -80 128 13 2176 111 0 0 chr20 51517326 51517615 -20636267 - AluSg SINE Alu -21 289 1 402 322 25 53 chr20 51517682 51517927 -20635955 + MIR SINE MIR 12 249 -13 766 268 20 29 chr20 51519713 51519959 -20633923 - MIR SINE MIR -18 244 1 481 256 105 60 chr20 51519985 51520317 -20633565 - L1ME4a LINE L1 -1 6120 5774 331 274 179 20 chr20 51521012 51521213 -20632669 - MIR SINE MIR -5 257 25 26 0 0 0 chr20 51522195 51522221 -20631661 + AT_rich Low_complexity Low_complexity 1 26 0 210 71 0 0 chr20 51523046 51523074 -20630808 + (A)n Simple_repeat Simple_repeat 1 28 0 1100 157 17 0 chr20 51523838 51524010 -20629872 + FAM SINE Alu 1 175 0 207 69 0 0 chr20 51524698 51524727 -20629155 + (A)n Simple_repeat Simple_repeat 1 29 0 180 0 0 0 chr20 51527123 51527143 -20626739 + (TGGGGG)n Simple_repeat Simple_repeat 6 25 0 346 232 71 0 chr20 51527170 51527269 -20626613 + MIR SINE MIR 79 184 -78 199 186 153 0 chr20 51527519 51527578 -20626304 + MIR SINE MIR 82 149 -113 414 0 0 0 chr20 51527677 51527723 -20626159 + (TAAA)n Simple_repeat Simple_repeat 2 47 0 2259 116 0 0 chr20 51527723 51528033 -20625849 + AluSx SINE Alu 1 310 -2 241 184 40 53 chr20 51528655 51528731 -20625151 - MIR SINE MIR -98 164 90 223 219 41 32 chr20 51528883 51528977 -20624905 + MIR SINE MIR 105 198 -64 1550 224 62 66 chr20 51529581 51529955 -20623927 - MLT1H LTR MaLR 0 549 141 1788 108 77 52 chr20 51529955 51530242 -20623640 - AluSg SINE Alu -16 294 1 1550 224 62 66 chr20 51530242 51530364 -20623518 - MLT1H LTR MaLR -408 141 20 353 246 105 0 chr20 51530397 51530511 -20623371 + L2 LINE L2 3178 3303 -10 2601 50 0 7 chr20 51530746 51531048 -20622834 - AluY SINE Alu -10 301 2 2284 112 0 3 chr20 51532057 51532361 -20621521 + AluSq SINE Alu 1 303 -10 2225 123 0 3 chr20 51532805 51533115 -20620767 - AluSx SINE Alu -3 309 1 1758 132 0 76 chr20 51533744 51534047 -20619835 - AluJb SINE Alu -32 280 1 183 225 0 0 chr20 51534138 51534178 -20619704 - MIR SINE MIR -111 151 112 22 0 0 0 chr20 51534500 51534522 -20619360 + AT_rich Low_complexity Low_complexity 1 22 0 2123 135 0 13 chr20 51534585 51534896 -20618986 + AluSx SINE Alu 1 307 -5 477 187 20 73 chr20 51535034 51535184 -20618698 - MIR SINE MIR -116 146 5 21 0 0 0 chr20 51536060 51536081 -20617801 + AT_rich Low_complexity Low_complexity 1 21 0 809 212 57 28 chr20 51536112 51536324 -20617558 + AluJo SINE Alu 3 220 -92 2206 177 55 2 chr20 51536537 51536973 -20616909 - L1MC1 LINE L1 -17 6316 5858 2438 97 0 0 chr20 51536999 51537310 -20616572 - AluSx SINE Alu -1 311 1 2129 125 7 3 chr20 51537350 51537655 -20616227 - AluSx SINE Alu -6 306 1 2353 70 7 0 chr20 51537692 51537977 -20615905 - AluSp SINE Alu -14 299 13 254 216 135 27 chr20 51538535 51538646 -20615236 - MER20 DNA MER1_type -90 129 7 2131 114 24 3 chr20 51538780 51539077 -20614805 - AluSg SINE Alu -7 303 1 988 120 8 0 chr20 51539079 51539212 -20614670 - AluSq/x SINE Alu -179 134 1 908 214 44 0 chr20 51539300 51539506 -20614376 + MER20B DNA MER1_type 1 215 -4 804 198 52 74 chr20 51539690 51539882 -20614000 + MIR SINE MIR 3 186 -76 2125 105 3 38 chr20 51539882 51540197 -20613685 + AluSp SINE Alu 1 304 -9 804 198 52 74 chr20 51540197 51540255 -20613627 + MIR SINE MIR 186 244 -18 6106 111 4 2 chr20 51540561 51541730 -20612152 + L1PA15 LINE L1 4992 6162 -3 528 251 74 79 chr20 51541831 51542070 -20611812 - L1M4 LINE L1 -3558 2588 2350 2283 101 0 10 chr20 51542070 51542376 -20611506 - AluSx SINE Alu -9 303 1 528 251 74 79 chr20 51542376 51542594 -20611288 - L1M4 LINE L1 -3796 2350 2133 274 265 200 16 chr20 51542608 51542793 -20611089 + L2 LINE L2 2847 3065 -248 306 172 125 0 chr20 51542867 51542931 -20610951 + L2 LINE L2 3173 3244 -69 906 119 15 15 chr20 51542947 51543081 -20610801 - FLAM_C SINE Alu -9 134 1 2160 112 0 10 chr20 51543592 51543888 -20609994 + AluSg1 SINE Alu 1 293 -16 768 234 35 0 chr20 51544217 51544388 -20609494 - MER5A DNA MER1_type -12 177 1 850 261 49 52 chr20 51544657 51544986 -20608896 - MER102a DNA MER1_type 0 330 3 5085 143 31 9 chr20 51545239 51545370 -20608512 + L1MA4 LINE L1 5305 5432 -868 1573 208 3 7 chr20 51545370 51545668 -20608214 + AluJo SINE Alu 1 297 -15 5085 143 31 9 chr20 51545668 51546480 -20607402 + L1MA4 LINE L1 5432 6268 -32 21 0 0 0 chr20 51546487 51546508 -20607374 + AT_rich Low_complexity Low_complexity 1 21 0 2359 91 3 7 chr20 51546542 51546849 -20607033 - AluSp SINE Alu -7 306 1 420 259 148 7 chr20 51547086 51547221 -20606661 + MER117 DNA MER1_type 44 197 0 977 315 137 10 chr20 51547264 51547646 -20606236 + L2 LINE L2 2655 3138 -175 279 0 0 0 chr20 51547646 51547677 -20606205 + (CA)n Simple_repeat Simple_repeat 1 31 0 977 315 137 10 chr20 51547677 51547856 -20606026 + L2 LINE L2 3138 3293 -20 247 330 42 25 chr20 51548024 51548142 -20605740 - MIR SINE MIR -65 143 24 491 180 153 13 chr20 51549613 51549763 -20604119 + L1ME4a LINE L1 5878 6048 -73 2631 59 0 0 chr20 51549796 51550103 -20603779 + AluY SINE Alu 1 307 -4 382 173 0 0 chr20 51550852 51550927 -20602955 + AluJ/FRAM SINE Alu 227 301 -1 261 0 0 0 chr20 51551898 51551935 -20601947 + L1MB4 LINE L1 6144 6180 0 203 259 0 37 chr20 51552040 51552094 -20601788 + L3 LINE CR1 1525 1576 -1 2056 123 3 26 chr20 51552877 51553179 -20600703 + AluJo SINE Alu 1 295 -17 646 250 130 47 chr20 51553199 51553475 -20600407 + MLT1H LTR MaLR 251 549 0 306 195 0 0 chr20 51553493 51553570 -20600312 + (CA)n Simple_repeat Simple_repeat 1 77 0 278 259 12 12 chr20 51553780 51553861 -20600021 - MIR SINE MIR -61 201 121 2122 173 29 5 chr20 51554532 51554953 -20598929 + L1MB7 LINE L1 5735 6165 -19 1931 150 10 20 chr20 51554964 51555270 -20598612 + AluJo SINE Alu 1 303 -9 689 101 0 18 chr20 51555300 51555409 -20598473 + L1MB8 LINE L1 6059 6165 -13 243 0 0 0 chr20 51555766 51555793 -20598089 + (CAA)n Simple_repeat Simple_repeat 2 28 0 270 95 95 0 chr20 51555918 51555960 -20597922 - MIR SINE MIR -34 228 183 404 332 109 5 chr20 51558123 51558358 -20595524 - MIR SINE MIR -1 261 3 27 73 0 0 chr20 51559441 51559496 -20594386 + AT_rich Low_complexity Low_complexity 1 55 0 1998 119 7 4 chr20 51559547 51559849 -20594033 - AluSx SINE Alu 0 307 5 23 0 0 0 chr20 51559999 51560022 -20593860 + AT_rich Low_complexity Low_complexity 1 23 0 257 255 101 63 chr20 51560237 51560602 -20593280 + L1M4 LINE L1 2629 3007 -3139 391 315 28 0 chr20 51560700 51560881 -20593001 + L1M4 LINE L1 3949 4134 -2012 1639 156 45 54 chr20 51560897 51561211 -20592671 + AluJo SINE Alu 1 311 -1 547 241 67 15 chr20 51561388 51561658 -20592224 + L1M4 LINE L1 4373 4656 -1490 2265 102 3 3 chr20 51561662 51561956 -20591926 + AluSc SINE Alu 1 294 -15 213 39 0 0 chr20 51562265 51562291 -20591591 + (TA)n Simple_repeat Simple_repeat 2 27 0 234 62 0 0 chr20 51562839 51562871 -20591011 + (CAAAAA)n Simple_repeat Simple_repeat 1 32 0 587 316 66 51 chr20 51563312 51563568 -20590314 + MIR SINE MIR 3 262 0 2109 108 7 0 chr20 51563631 51563937 -20589945 + AluSg SINE Alu 1 308 0 5667 155 41 25 chr20 51563940 51565641 -20588241 + L1PA16 LINE L1 4125 5866 -300 2222 98 7 0 chr20 51565641 51565928 -20587954 + AluSx SINE Alu 1 289 -23 5667 155 41 25 chr20 51565928 51566225 -20587657 + L1PA16 LINE L1 5866 6157 -9 387 258 30 76 chr20 51566401 51566422 -20587460 + MIR SINE MIR 21 41 -221 2267 96 13 0 chr20 51566422 51566725 -20587157 - AluSg SINE Alu -3 307 1 387 258 30 76 chr20 51566725 51566835 -20587047 + MIR SINE MIR 41 146 -116 221 0 35 0 chr20 51566929 51566958 -20586924 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 390 280 45 32 chr20 51567353 51567510 -20586372 + L1MEd LINE L1 627 785 -5334 646 193 18 0 chr20 51567597 51567711 -20586171 + FLAM_A SINE Alu 1 116 -17 252 0 0 0 chr20 51567714 51567742 -20586140 + (TAAA)n Simple_repeat Simple_repeat 3 30 0 627 313 85 49 chr20 51567768 51568234 -20585648 + L1M4c LINE L1 1470 1918 -825 2543 55 0 10 chr20 51568323 51568632 -20585250 - AluY SINE Alu -5 306 1 2468 89 0 13 chr20 51568925 51569239 -20584643 + AluSg SINE Alu 1 310 0 1629 108 22 0 chr20 51569249 51569518 -20584364 + L1P LINE L1 5083 5357 -789 185 0 40 0 chr20 51569518 51569543 -20584339 + (TTTTTA)n Simple_repeat Simple_repeat 2 27 0 650 77 10 48 chr20 51569543 51569599 -20584283 - HY3 scRNA scRNA -1 100 48 2217 114 0 3 chr20 51569599 51569898 -20583984 + AluSx SINE Alu 1 298 -14 650 77 10 48 chr20 51569898 51569945 -20583937 - HY3 scRNA scRNA -53 48 1 497 96 52 96 chr20 51569958 51569978 -20583904 - L1MC1 LINE L1 0 6333 6314 2194 108 3 10 chr20 51569978 51570283 -20583599 + AluSx SINE Alu 1 303 -9 497 96 52 96 chr20 51570283 51570377 -20583505 - L1MC1 LINE L1 -19 6314 6224 247 359 23 23 chr20 51570527 51570655 -20583227 - MIR3 SINE MIR -16 192 65 1482 174 50 25 chr20 51570694 51570976 -20582906 + AluJo SINE Alu 1 289 -23 277 232 56 32 chr20 51571254 51571379 -20582503 + L1MC5 LINE L1 7796 7923 -38 256 229 33 0 chr20 51573649 51573710 -20580172 + L2 LINE L2 3250 3312 -1 2265 104 16 7 chr20 51574898 51575207 -20578675 - AluSx SINE Alu 0 312 1 633 245 58 21 chr20 51575256 51575497 -20578385 + MER20B DNA MER1_type 516 765 -18 921 213 62 54 chr20 51575528 51575786 -20578096 - MIR SINE MIR -1 261 2 483 296 128 15 chr20 51575957 51576160 -20577722 + MIR SINE MIR 31 256 -6 1686 170 16 33 chr20 51576280 51576586 -20577296 - AluJb SINE Alu -11 301 1 301 290 104 47 chr20 51577917 51578110 -20575772 - Charlie8 DNA MER1_type -2042 375 172 2325 114 0 0 chr20 51578366 51578672 -20575210 - AluSx SINE Alu -6 306 1 346 283 58 21 chr20 51579186 51579377 -20574505 + L1MC4a LINE L1 5484 5681 -440 315 284 104 45 chr20 51579416 51579617 -20574265 + L1MC4a LINE L1 5730 5942 -1866 221 133 22 22 chr20 51579620 51579665 -20574217 + (TAA)n Simple_repeat Simple_repeat 3 47 0 27 62 0 0 chr20 51579815 51579863 -20574019 + AT_rich Low_complexity Low_complexity 1 48 0 2131 128 3 0 chr20 51580001 51580298 -20573584 - AluSq SINE Alu -14 299 2 227 185 0 19 chr20 51580716 51580770 -20573112 + (TA)n Simple_repeat Simple_repeat 1 53 0 2100 138 6 3 chr20 51581000 51581311 -20572571 + AluSx SINE Alu 1 312 0 1002 154 0 0 chr20 51581321 51581457 -20572425 + FRAM SINE Alu 1 132 -44 1421 195 72 8 chr20 51581457 51581762 -20572120 + AluJo SINE Alu 4 325 0 325 316 40 46 chr20 51581791 51581943 -20571939 + L1ME4a LINE L1 5079 5229 -917 25 75 0 0 chr20 51581967 51582020 -20571862 + AT_rich Low_complexity Low_complexity 1 53 0 1818 166 3 7 chr20 51582032 51582334 -20571548 + AluJb SINE Alu 1 301 -11 538 273 28 76 chr20 51582467 51582823 -20571059 + L1ME4a LINE L1 5488 5826 -295 1257 267 92 30 chr20 51582833 51583440 -20570442 + HAL1 LINE L1 8 652 -1855 4177 177 48 1 chr20 51583592 51585327 -20568555 + L1MB7 LINE L1 4275 6133 -51 264 125 0 0 chr20 51585413 51585469 -20568413 - LTR66 LTR ERVL -161 449 394 198 103 0 0 chr20 51585473 51585502 -20568380 + (CATA)n Simple_repeat Simple_repeat 2 30 0 463 132 0 0 chr20 51585504 51585572 -20568310 - AluYb8 SINE Alu -20 298 231 1453 108 0 0 chr20 51585578 51585763 -20568119 - AluSx SINE Alu -127 185 1 31 0 0 0 chr20 51585997 51586028 -20567854 + AT_rich Low_complexity Low_complexity 1 31 0 255 293 142 0 chr20 51586249 51586355 -20567527 - L2 LINE L2 -1252 2062 1942 1732 263 154 30 chr20 51586997 51587953 -20565929 + L2 LINE L2 2210 3304 -9 262 265 158 52 chr20 51588098 51588276 -20565606 + MIR SINE MIR 7 198 -63 2032 122 18 0 chr20 51588353 51588655 -20565227 + AluSx SINE Alu 1 307 0 536 261 64 43 chr20 51588664 51588852 -20565030 - MIR SINE MIR -26 236 45 444 148 0 0 chr20 51588972 51589053 -20564829 - MER33 DNA MER1_type -1 323 243 973 178 6 0 chr20 51589053 51589216 -20564666 + FRAM SINE Alu 3 166 -10 918 196 14 13 chr20 51589216 51589457 -20564425 - MER33 DNA MER1_type -250 74 1 2243 79 0 35 chr20 51589494 51589809 -20564073 + AluY SINE Alu 1 304 -7 896 328 61 19 chr20 51590307 51590361 -20563521 + L2 LINE L2 2636 2686 -627 1753 143 3 64 chr20 51590361 51590675 -20563207 - AluJo SINE Alu -17 295 1 896 328 61 19 chr20 51590675 51591267 -20562615 + L2 LINE L2 2686 3313 0 1657 145 9 83 chr20 51591561 51591886 -20561996 + AluJo SINE Alu 2 302 -10 385 270 86 64 chr20 51592300 51592541 -20561341 + L1ME4a LINE L1 5532 5785 -336 2129 114 3 3 chr20 51592541 51592838 -20561044 + AluSx SINE Alu 1 297 -15 385 270 86 64 chr20 51592838 51592955 -20560927 + L1ME4a LINE L1 5785 5898 -223 2373 60 3 13 chr20 51593028 51593327 -20560555 + AluY SINE Alu 1 296 -15 297 299 140 9 chr20 51593899 51594006 -20559876 + L2 LINE L2 3140 3260 -12 2203 125 0 25 chr20 51594892 51595212 -20558670 + AluSx SINE Alu 1 312 0 398 284 180 11 chr20 51595797 51595980 -20557902 - MIR SINE MIR -1 261 48 310 288 59 77 chr20 51596310 51596480 -20557402 + MIR SINE MIR 29 195 -67 543 288 110 37 chr20 51596842 51597169 -20556713 + MLT1L LTR MaLR 40 390 -225 438 289 147 11 chr20 51597312 51597871 -20556011 - L1MEd LINE L1 -838 1652 915 2149 117 3 3 chr20 51599227 51599518 -20554364 + AluSc SINE Alu 1 291 -18 865 143 0 0 chr20 51599783 51599902 -20553980 + FLAM_C SINE Alu 3 121 -22 201 74 0 0 chr20 51599902 51599929 -20553953 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 544 276 60 51 chr20 51600128 51600345 -20553537 - MIR SINE MIR -3 259 41 1907 116 8 4 chr20 51602063 51602330 -20551552 + AluY SINE Alu 39 306 -5 387 0 0 0 chr20 51602870 51602913 -20550969 + (TG)n Simple_repeat Simple_repeat 2 44 0 276 30 0 0 chr20 51603073 51603106 -20550776 + (CA)n Simple_repeat Simple_repeat 2 34 0 989 34 0 0 chr20 51603753 51603872 -20550010 - L1PA3 LINE L1 0 6155 6037 1810 168 41 16 chr20 51604766 51605135 -20548747 + MLT1B LTR MaLR 13 390 0 672 224 38 49 chr20 51605545 51605559 -20548323 + MIR SINE MIR 14 27 -235 2245 94 0 0 chr20 51605559 51605856 -20548026 + AluY SINE Alu 1 297 -14 672 224 38 49 chr20 51605856 51606024 -20547858 + MIR SINE MIR 27 194 -68 299 140 0 0 chr20 51606033 51606083 -20547799 - MER116 DNA Mariner -26 54 5 291 232 0 29 chr20 51606086 51606155 -20547727 + MIR SINE MIR 196 262 0 231 241 184 11 chr20 51608021 51608108 -20545774 - MIR SINE MIR 0 262 161 532 256 128 17 chr20 51608147 51608319 -20545563 - MIR SINE MIR -48 214 24 340 231 319 24 chr20 51608647 51608816 -20545066 - MIR SINE MIR -10 252 34 809 150 8 8 chr20 51608838 51608971 -20544911 - FLAM_C SINE Alu -10 133 1 709 204 93 0 chr20 51609119 51609281 -20544601 + MER3 DNA MER1_type 10 186 -23 596 242 15 139 chr20 51609355 51609410 -20544472 - MER8 DNA MER2_type 0 239 179 198 0 0 0 chr20 51609410 51609432 -20544450 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 596 242 15 139 chr20 51609432 51609649 -20544233 - MER8 DNA MER2_type -60 179 1 714 153 169 0 chr20 51609668 51609792 -20544090 + AluJb SINE Alu 3 147 -165 806 170 118 44 chr20 51609962 51610191 -20543691 + L1MB8 LINE L1 5927 6172 -6 762 246 130 13 chr20 51610333 51610834 -20543048 - MLT1G1 LTR MaLR -2 593 1 1806 130 58 11 chr20 51610927 51611204 -20542678 - AluSx SINE Alu -22 290 1 888 234 75 59 chr20 51611237 51611475 -20542407 - MLT1L LTR MaLR -124 491 243 2316 96 7 0 chr20 51611475 51611778 -20542104 - AluY SINE Alu -6 305 1 888 234 75 59 chr20 51611778 51611910 -20541972 - MLT1L LTR MaLR -372 243 115 221 351 61 70 chr20 51612173 51612518 -20541364 - L2 LINE L2 -40 3232 2891 2437 149 30 39 chr20 51612594 51613057 -20540825 + MER65C LTR ERV1 3 461 0 217 189 94 0 chr20 51613075 51613128 -20540754 - L2 LINE L2 0 3313 3256 * 593 298 137 22 chr20 51613113 51613428 -20540454 + L2 LINE L2 2911 3261 -52 296 269 117 113 chr20 51614048 51614605 -20539277 - L2 LINE L2 0 3272 2711 185 384 0 12 chr20 51614897 51614983 -20538899 - MIR SINE MIR -141 121 37 207 279 58 23 chr20 51615307 51615393 -20538489 + MIR SINE MIR 46 134 -74 426 151 0 0 chr20 51615850 51615923 -20537959 + (TA)n Simple_repeat Simple_repeat 1 73 0 256 229 33 0 chr20 51616827 51616888 -20536994 - L2 LINE L2 -1 3312 3250 277 232 56 32 chr20 51619158 51619283 -20534599 - L1MC5 LINE L1 -38 7923 7796 1482 174 50 25 chr20 51619561 51619843 -20534039 - AluJo SINE Alu -23 289 1 247 359 23 23 chr20 51619882 51620010 -20533872 + MIR3 SINE MIR 65 192 -16 497 96 52 96 chr20 51620160 51620254 -20533628 + L1MC1 LINE L1 6224 6314 -19 2194 108 3 10 chr20 51620254 51620559 -20533323 - AluSx SINE Alu -9 303 1 497 96 52 96 chr20 51620559 51620579 -20533303 + L1MC1 LINE L1 6314 6333 0 650 77 10 48 chr20 51620592 51620639 -20533243 + HY3 scRNA scRNA 1 48 -53 2217 114 0 3 chr20 51620639 51620938 -20532944 - AluSx SINE Alu -14 298 1 650 77 10 48 chr20 51620938 51620994 -20532888 + HY3 scRNA scRNA 48 100 -1 185 0 40 0 chr20 51620994 51621019 -20532863 + (TAAAAA)n Simple_repeat Simple_repeat 2 27 0 1629 108 22 0 chr20 51621019 51621288 -20532594 - L1P LINE L1 -789 5357 5083 2468 89 0 13 chr20 51621298 51621612 -20532270 - AluSg SINE Alu 0 310 1 2534 55 0 10 chr20 51621905 51622213 -20531669 + AluY SINE Alu 1 305 -6 627 313 85 49 chr20 51622302 51622768 -20531114 - L1MEd LINE L1 -825 1918 1470 252 0 0 0 chr20 51622794 51622822 -20531060 + (TTTA)n Simple_repeat Simple_repeat 3 30 0 646 193 18 0 chr20 51622825 51622939 -20530943 - FLAM_A SINE Alu -17 116 1 390 280 45 32 chr20 51623026 51623183 -20530699 - L1MEd LINE L1 -5334 1038 880 221 0 35 0 chr20 51623578 51623607 -20530275 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 387 258 30 76 chr20 51623701 51623811 -20530071 - MIR SINE MIR -116 146 41 2267 96 13 0 chr20 51623811 51624114 -20529768 + AluSg SINE Alu 1 307 -3 387 258 30 76 chr20 51624114 51624135 -20529747 - MIR SINE MIR -221 41 21 5667 155 41 25 chr20 51624311 51624608 -20529274 - L1PA16 LINE L1 -9 6157 5866 2222 98 7 0 chr20 51624608 51624895 -20528987 - AluSx SINE Alu -23 289 1 5667 155 41 25 chr20 51624895 51626596 -20527286 - L1PA16 LINE L1 -300 5866 4125 2108 108 7 0 chr20 51626599 51626905 -20526977 - AluSg SINE Alu 0 308 1 587 316 66 51 chr20 51626968 51627224 -20526658 - MIR SINE MIR 0 262 3 234 62 0 0 chr20 51627665 51627697 -20526185 + (TTTTTG)n Simple_repeat Simple_repeat 1 32 0 213 39 0 0 chr20 51628245 51628271 -20525611 + (TA)n Simple_repeat Simple_repeat 2 27 0 2265 102 3 3 chr20 51628580 51628874 -20525008 - AluSc SINE Alu -15 294 1 547 241 67 15 chr20 51628878 51629148 -20524734 - L1M4 LINE L1 -1490 4656 4373 1639 156 45 54 chr20 51629325 51629639 -20524243 - AluJo SINE Alu -1 311 1 391 315 28 0 chr20 51629655 51629836 -20524046 - L1M4 LINE L1 -2012 4134 3949 257 255 101 63 chr20 51629934 51630299 -20523583 - L1M4 LINE L1 -3139 3007 2629 23 0 0 0 chr20 51630514 51630537 -20523345 + AT_rich Low_complexity Low_complexity 1 23 0 1999 119 7 4 chr20 51630687 51630989 -20522893 + AluSx SINE Alu 5 307 0 27 73 0 0 chr20 51631040 51631095 -20522787 + AT_rich Low_complexity Low_complexity 1 55 0 404 332 109 5 chr20 51632178 51632413 -20521469 + MIR SINE MIR 3 261 -1 270 95 95 0 chr20 51634576 51634618 -20519264 + MIR SINE MIR 183 228 -34 243 0 0 0 chr20 51634743 51634770 -20519112 + (TTG)n Simple_repeat Simple_repeat 2 28 0 689 101 0 18 chr20 51635127 51635236 -20518646 - L1MB8 LINE L1 -13 6165 6059 1931 150 10 20 chr20 51635266 51635572 -20518310 - AluJo SINE Alu -9 303 1 2122 173 29 5 chr20 51635583 51636004 -20517878 - L1MB7 LINE L1 -19 6165 5735 278 259 12 12 chr20 51636675 51636756 -20517126 + MIR SINE MIR 121 201 -61 306 195 0 0 chr20 51636966 51637043 -20516839 + (TG)n Simple_repeat Simple_repeat 1 77 0 646 250 130 47 chr20 51637061 51637337 -20516545 - MLT1H LTR MaLR 0 549 251 2056 123 3 26 chr20 51637357 51637659 -20516223 - AluJo SINE Alu -17 295 1 203 259 0 37 chr20 51638442 51638496 -20515386 - L3 LINE CR1 -1 1576 1525 261 0 0 0 chr20 51638601 51638638 -20515244 - L1MB4 LINE L1 0 6180 6144 358 187 0 0 chr20 51639609 51639684 -20514198 - AluJ/FRAM SINE Alu -1 301 227 2631 59 0 0 chr20 51640433 51640740 -20513142 - AluY SINE Alu -4 307 1 491 180 153 13 chr20 51640773 51640923 -20512959 - L1ME4a LINE L1 -73 6048 5878 247 330 42 25 chr20 51642394 51642512 -20511370 + MIR SINE MIR 24 143 -65 977 315 137 10 chr20 51642680 51642859 -20511023 - L2 LINE L2 -20 3293 3138 279 0 0 0 chr20 51642859 51642890 -20510992 + (TG)n Simple_repeat Simple_repeat 1 31 0 977 315 137 10 chr20 51642890 51643272 -20510610 - L2 LINE L2 -175 3138 2655 420 259 148 7 chr20 51643315 51643450 -20510432 - MER117 DNA MER1_type 0 197 44 2377 91 3 7 chr20 51643687 51643996 -20509886 + AluSp SINE Alu 1 308 -5 21 0 0 0 chr20 51644030 51644051 -20509831 + AT_rich Low_complexity Low_complexity 1 21 0 5085 143 31 9 chr20 51644058 51644870 -20509012 - L1MA4 LINE L1 -32 6268 5432 1573 208 3 7 chr20 51644870 51645168 -20508714 - AluJo SINE Alu -15 297 1 5085 143 31 9 chr20 51645168 51645299 -20508583 - L1MA4 LINE L1 -868 5432 5305 850 261 49 52 chr20 51645552 51645881 -20508001 + MER102a DNA MER1_type 3 330 0 768 234 35 0 chr20 51646150 51646321 -20507561 + MER5A DNA MER1_type 1 177 -12 2160 112 0 10 chr20 51646650 51646946 -20506936 - AluSg1 SINE Alu -16 293 1 906 119 15 15 chr20 51647457 51647591 -20506291 + FLAM_C SINE Alu 1 134 -9 306 172 125 0 chr20 51647607 51647671 -20506211 - L2 LINE L2 -69 3244 3173 274 265 200 16 chr20 51647745 51647930 -20505952 - L2 LINE L2 -248 3065 2847 528 251 74 79 chr20 51647944 51648162 -20505720 + L1M4 LINE L1 2133 2350 -3796 2283 101 0 10 chr20 51648162 51648468 -20505414 + AluSx SINE Alu 1 303 -9 528 251 74 79 chr20 51648468 51648707 -20505175 + L1M4 LINE L1 2350 2588 -3558 6106 111 2 4 chr20 51648808 51650107 -20503775 - L1PA15 LINE L1 -3 6162 4863 2194 128 0 10 chr20 51650117 51650422 -20503460 - AluSx SINE Alu -10 302 1 532 267 32 85 chr20 51650455 51650736 -20503146 + L1M4 LINE L1 2785 3050 -3096 413 279 101 35 chr20 51650743 51651001 -20502881 + L1M4 LINE L1 3125 3399 -2747 394 284 42 16 chr20 51651030 51651173 -20502709 + L1M4 LINE L1 4651 4802 -1344 1803 171 3 23 chr20 51651173 51651482 -20502400 + AluJo SINE Alu 1 303 -9 394 284 42 16 chr20 51651482 51651528 -20502354 + L1M4 LINE L1 4802 4845 -1301 28 29 0 0 chr20 51651539 51651574 -20502308 + AT_rich Low_complexity Low_complexity 1 35 0 378 224 187 0 chr20 51652414 51652521 -20501361 - MIR SINE MIR 0 262 136 1067 110 17 38 chr20 51652522 51652733 -20501149 + L1MA8 LINE L1 6036 6227 -64 2528 210 59 27 chr20 51652741 51653441 -20500441 + MER44D DNA MER2_type 12 605 0 340 138 0 0 chr20 51653441 51653506 -20500376 + L1MA8 LINE L1 6226 6290 -1 426 252 87 17 chr20 51653508 51653623 -20500259 - MIR SINE MIR -139 123 1 1041 215 77 54 chr20 51654698 51655215 -20498667 - L1MC5 LINE L1 -102 7859 7331 5364 201 81 8 chr20 51655224 51656558 -20497324 - Charlie1a DNA MER1_type -23 1432 1 1769 237 105 71 chr20 51656558 51657844 -20496038 - L1MC5 LINE L1 -624 7337 5945 192 77 0 0 chr20 51657844 51657870 -20496012 + (CATG)n Simple_repeat Simple_repeat 1 26 0 1769 237 105 71 chr20 51657870 51658095 -20495787 - L1MC5 LINE L1 -2016 5945 5729 3135 86 2 11 chr20 51659373 51659815 -20494067 - L1PA11 LINE L1 0 6174 5737 243 32 0 0 chr20 51659815 51659846 -20494036 + L1PA11 LINE L1 5698 5728 -435 567 260 95 35 chr20 51659936 51660143 -20493739 + MIR SINE MIR 12 236 -26 1166 152 92 5 chr20 51660143 51660360 -20493522 + MER46A DNA MER2_type 1 236 0 567 260 95 35 chr20 51660360 51660383 -20493499 + MIR SINE MIR 236 256 -6 1734 165 0 30 chr20 51660915 51661212 -20492670 + AluJo SINE Alu 10 297 -15 303 228 47 71 chr20 51661341 51661468 -20492414 + MIR SINE MIR 78 201 -61 23 68 0 0 chr20 51661579 51661623 -20492259 + AT_rich Low_complexity Low_complexity 1 44 0 202 313 87 43 chr20 51661834 51661949 -20491933 - MIR SINE MIR -64 144 25 2327 106 0 0 chr20 51662337 51662649 -20491233 - AluSx SINE Alu 0 312 1 1736 174 0 30 chr20 51662698 51663003 -20490879 + AluJo SINE Alu 13 308 -4 2420 93 0 10 chr20 51663209 51663522 -20490360 - AluSg SINE Alu 0 310 1 265 269 80 109 chr20 51663669 51663844 -20490038 - MIR SINE MIR 0 262 93 418 266 180 7 chr20 51664356 51664495 -20489387 + MIR3 SINE MIR 23 185 -23 251 313 78 23 chr20 51664485 51664613 -20489269 + MIR SINE MIR 103 237 -25 * 412 285 21 28 chr20 51664752 51664896 -20488986 + MIR SINE MIR 115 257 -5 2045 74 89 0 chr20 51665054 51665324 -20488558 - AluSx SINE Alu -18 294 1 218 271 21 0 chr20 51666522 51666570 -20487312 + L3 LINE CR1 1520 1568 -9 411 266 147 6 chr20 51666919 51667096 -20486786 - L1MC/D LINE L1 -2038 5770 5569 377 377 28 5 chr20 51667285 51667500 -20486382 - L1MC/D LINE L1 -985 5161 4942 328 291 205 0 chr20 51668361 51668512 -20485370 + MIR SINE MIR 11 192 -70 456 97 28 0 chr20 51668527 51668599 -20485283 + MER46A DNA MER2_type 163 236 0 234 171 13 145 chr20 51668599 51668675 -20485207 + MIR SINE MIR 194 259 -3 440 258 153 30 chr20 51668734 51669067 -20484815 - L1ME4a LINE L1 -6 6115 5742 263 294 211 18 chr20 51670250 51670359 -20483523 - L3 LINE CR1 -3 1574 1445 1884 138 9 50 chr20 51670825 51671143 -20482739 + AluJo SINE Alu 1 305 -7 494 326 38 38 chr20 51671143 51671382 -20482500 + MIR SINE MIR 24 262 0 670 271 103 67 chr20 51671923 51672260 -20481622 - L1M4 LINE L1 -2748 3398 3040 2233 112 0 13 chr20 51672260 51672573 -20481309 - AluSg SINE Alu -1 309 1 670 271 103 67 chr20 51672573 51672670 -20481212 - L1M4 LINE L1 -3106 3040 2948 1369 195 155 3 chr20 51672682 51673030 -20480852 - L1ME1 LINE L1 -5 6161 5761 340 212 41 11 chr20 51673231 51673349 -20480533 - LTR41 LTR ERVL 0 795 658 315 0 0 0 chr20 51674596 51674631 -20479251 + (CA)n Simple_repeat Simple_repeat 1 35 0 3868 165 16 13 chr20 51675553 51676245 -20477637 - MER44D DNA MER2_type -8 597 32 24 32 0 0 chr20 51676560 51676591 -20477291 + AT_rich Low_complexity Low_complexity 1 31 0 696 275 12 57 chr20 51677083 51677330 -20476552 + MIR SINE MIR 27 262 0 191 35 0 35 chr20 51677669 51677698 -20476184 + (CAAAA)n Simple_repeat Simple_repeat 5 32 0 1338 188 72 36 chr20 51677824 51678128 -20475754 + MER44D DNA MER2_type 1 315 -390 8224 166 54 52 chr20 51678139 51678406 -20475476 - L1PA15 LINE L1 0 6165 5900 2262 123 0 13 chr20 51678406 51678722 -20475160 - AluSx SINE Alu 0 312 1 8224 166 54 52 chr20 51678722 51679200 -20474682 - L1PA15 LINE L1 -265 5900 5424 2215 48 0 96 chr20 51679200 51679532 -20474350 - AluY SINE Alu -11 300 1 2084 124 10 16 chr20 51679533 51679847 -20474035 - AluJb SINE Alu 0 312 1 8224 166 54 52 chr20 51679847 51680343 -20473539 - L1PA15 LINE L1 -741 5424 4930 2395 53 0 3 chr20 51680343 51680650 -20473232 - AluY SINE Alu 0 306 1 8224 166 54 52 chr20 51680650 51682495 -20471387 - L1PA15 LINE L1 -1235 4930 3068 732 104 49 49 chr20 51682501 51682664 -20471218 + MER44D DNA MER2_type 296 513 -92 208 170 38 0 chr20 51682669 51682722 -20471160 + (TA)n Simple_repeat Simple_repeat 1 55 0 297 0 0 0 chr20 51682724 51682757 -20471125 + (CA)n Simple_repeat Simple_repeat 2 34 0 274 158 175 0 chr20 51682789 51682846 -20471036 + MER44D DNA MER2_type 539 605 0 351 293 67 30 chr20 51684638 51684802 -20469080 - MIR SINE MIR -77 185 16 386 173 12 25 chr20 51685010 51685091 -20468791 - MIR SINE MIR -115 147 68 387 327 92 0 chr20 51685221 51685374 -20468508 + MIR SINE MIR 65 231 -31 755 270 185 55 chr20 51686346 51687152 -20466730 - L2 LINE L2 -74 3239 2321 2288 78 7 7 chr20 51687152 51687447 -20466435 + AluSx SINE Alu 7 301 -11 877 129 23 82 chr20 51687447 51687618 -20466264 - THE1B LTR MaLR -203 161 1 1789 171 20 0 chr20 51688300 51688604 -20465278 - AluJo SINE Alu -1 311 2 466 288 58 14 chr20 51688612 51688751 -20465131 - MER5A DNA MER1_type -44 145 1 386 252 81 9 chr20 51688751 51688861 -20465021 - MIR3 SINE MIR -25 183 66 537 251 40 89 chr20 51688940 51689187 -20464695 + L2 LINE L2 3076 3310 -3 195 204 0 0 chr20 51689369 51689413 -20464469 + (TAA)n Simple_repeat Simple_repeat 2 45 0 380 332 120 18 chr20 51689444 51689661 -20464221 - MIR SINE MIR -21 241 3 373 304 80 40 chr20 51690391 51690592 -20463290 - MIR SINE MIR -33 229 21 1082 236 46 0 chr20 51690615 51690852 -20463030 + MIR SINE MIR 15 262 0 205 211 35 18 chr20 51690975 51691032 -20462850 + MIR SINE MIR 204 261 -1 32 43 0 0 chr20 51692067 51692113 -20461769 + AT_rich Low_complexity Low_complexity 1 46 0 718 186 62 25 chr20 51692797 51692958 -20460924 - MIR3 SINE MIR -12 196 30 651 246 137 6 chr20 51693516 51693699 -20460183 - MIR SINE MIR 0 262 56 1834 111 66 7 chr20 51693940 51694229 -20459653 - AluSq SINE Alu -7 306 1 2294 87 0 3 chr20 51694737 51695047 -20458835 - AluSg SINE Alu -1 309 1 195 218 0 0 chr20 51695197 51695252 -20458630 + (TGGA)n Simple_repeat Simple_repeat 2 56 0 193 279 0 0 chr20 51695312 51695355 -20458527 - L2 LINE L2 -8 3264 3222 588 247 19 0 chr20 51695385 51695547 -20458335 + L1M4 LINE L1 3283 3447 -2699 1237 155 0 40 chr20 51695547 51695773 -20458109 + AluJb SINE Alu 81 297 -15 607 269 31 6 chr20 51695823 51695983 -20457899 - MIR SINE MIR -97 165 2 394 341 79 54 chr20 51696611 51696928 -20456954 - L2 LINE L2 -15 3257 2933 284 259 89 18 chr20 51697433 51697545 -20456337 - MIR SINE MIR -11 251 132 1713 265 46 8 chr20 51697565 51698067 -20455815 + MER20B DNA MER1_type 19 539 -244 572 285 153 20 chr20 51698148 51698484 -20455398 - L2 LINE L2 -216 3097 2698 530 248 28 21 chr20 51698493 51698530 -20455352 + L1ME3A LINE L1 5382 5417 -745 1521 109 140 71 chr20 51698530 51698600 -20455282 - MER2 DNA MER2_type 0 344 280 1920 118 38 0 chr20 51698600 51698887 -20454995 + AluSx SINE Alu 1 298 -14 1521 109 140 71 chr20 51698887 51699138 -20454744 - MER2 DNA MER2_type -64 280 1 530 248 28 21 chr20 51699138 51699245 -20454637 + L1ME3A LINE L1 5417 5527 -635 799 268 61 0 chr20 51699259 51699472 -20454410 + L1ME3A LINE L1 5611 5836 -334 3082 135 39 14 chr20 51699474 51699993 -20453889 - MER89 LTR ERV1 -27 532 1 1111 230 30 39 chr20 51699993 51700047 -20453835 + L1ME3A LINE L1 5833 5886 -284 2548 101 58 12 chr20 51700047 51700462 -20453420 + L1MB3 LINE L1 5748 6181 -2 1111 230 30 39 chr20 51700462 51700738 -20453144 + L1ME3A LINE L1 5886 6160 -10 386 298 101 27 chr20 51701129 51701317 -20452565 - MIR SINE MIR -12 250 49 229 243 39 17 chr20 51701410 51701551 -20452331 + MLT1K LTR MaLR 383 585 -3 259 270 63 0 chr20 51701653 51701716 -20452166 - MIR SINE MIR -168 94 28 357 258 124 93 chr20 51702135 51702329 -20451553 + MIR SINE MIR 13 212 -50 189 164 309 0 chr20 51702529 51702584 -20451298 + MIR3 SINE MIR 83 154 -54 188 184 20 41 chr20 51702780 51702829 -20451053 - MIR SINE MIR -112 150 103 290 320 11 57 chr20 51703202 51703377 -20450505 + MLT1K LTR MaLR 11 177 -411 395 172 11 43 chr20 51703559 51703652 -20450230 + LTR67 LTR ERVL 468 557 0 605 298 35 44 chr20 51704402 51704718 -20449164 + ERVL LTR ERVL 1001 1313 -4451 3668 107 10 4 chr20 51704959 51705456 -20448426 + LTR3b LTR ERVK 1 500 0 651 306 43 56 chr20 51705478 51705851 -20448031 + ERVL LTR ERVL 1674 2041 -3723 845 274 90 20 chr20 51705950 51706249 -20447633 + ERVL LTR ERVL 2193 2512 -3252 523 316 56 14 chr20 51706688 51706903 -20446979 + ERVL LTR ERVL 3339 3562 -2202 688 284 47 18 chr20 51706932 51707456 -20446426 + ERVL LTR ERVL 4824 5411 -353 1550 226 110 24 chr20 51708085 51708550 -20445332 + MLT1D LTR MaLR 1 505 0 229 268 0 0 chr20 51708644 51708700 -20445182 + MLT1K LTR MaLR 512 567 -21 447 348 60 39 chr20 51709281 51709563 -20444319 + L2 LINE L2 2933 3220 -52 402 243 39 19 chr20 51710973 51711076 -20442806 + MIR SINE MIR 46 150 -112 348 223 117 9 chr20 51711942 51712054 -20441828 - MIR SINE MIR -72 136 14 1151 151 21 0 chr20 51712447 51712633 -20441249 + MER20 DNA MER1_type 29 218 -1 402 221 0 23 chr20 51712708 51712794 -20441088 - MER5A DNA MER1_type -97 92 9 325 286 43 31 chr20 51713151 51713298 -20440584 + MIR SINE MIR 16 165 -68 339 290 137 16 chr20 51713632 51713756 -20440126 + MIR SINE MIR 118 256 -6 253 290 24 48 chr20 51713963 51714087 -20439795 + MIR SINE MIR 113 233 -29 203 261 200 67 chr20 51715394 51715589 -20438293 + MIR SINE MIR 31 251 -11 293 202 155 0 chr20 51715634 51715718 -20438164 + MIR SINE MIR 81 177 -85 949 224 11 0 chr20 51715739 51715922 -20437960 + MER5A DNA MER1_type 5 189 0 502 254 217 5 chr20 51715935 51716124 -20437758 + MIR SINE MIR 21 249 -13 344 255 149 12 chr20 51716145 51716306 -20437576 + MIR SINE MIR 32 214 -48 348 306 58 33 chr20 51716459 51716580 -20437302 + MIR SINE MIR 23 146 -62 449 285 104 42 chr20 51716672 51716865 -20437017 + MIR SINE MIR 47 251 -11 270 333 11 0 chr20 51716930 51717017 -20436865 + MIR SINE MIR 54 141 -67 * 355 283 49 60 chr20 51717007 51717173 -20436709 - MIR3 SINE MIR -91 171 5 * 401 217 62 47 chr20 51717161 51717290 -20436592 - MIR SINE MIR -11 251 121 235 245 50 79 chr20 51717853 51717992 -20435890 - MIR SINE MIR 0 262 128 470 279 137 0 chr20 51718331 51718492 -20435390 - MIR SINE MIR -1 261 79 240 149 56 149 chr20 51718512 51718551 -20435331 - MER33 DNA MER1_type -2261 324 283 180 0 0 0 chr20 51718551 51718571 -20435311 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 2106 97 7 14 chr20 51718574 51718864 -20435018 - AluSx SINE Alu -24 288 1 240 149 56 149 chr20 51718864 51718927 -20434955 - MER33 DNA MER1_type -2304 281 228 780 206 35 12 chr20 51718927 51719097 -20434785 - Tigger2 DNA MER2_type 0 2718 2545 * 1258 135 10 5 chr20 51719076 51719283 -20434599 - Tigger2 DNA MER2_type -2510 208 1 466 138 92 23 chr20 51719283 51719402 -20434480 - MER33 DNA MER1_type -95 268 141 1701 221 90 30 chr20 51719402 51719957 -20433925 - MLT1E3 LTR MaLR -1 623 1 25 0 0 0 chr20 51719973 51719998 -20433884 + AT_rich Low_complexity Low_complexity 1 25 0 546 188 0 0 chr20 51720022 51720107 -20433775 - MER33 DNA MER1_type -239 85 1 312 230 27 0 chr20 51720144 51720218 -20433664 - MIR3 SINE MIR -15 193 118 537 217 66 25 chr20 51720606 51720644 -20433238 + MIR SINE MIR 21 56 -190 2239 207 123 19 chr20 51720644 51721181 -20432701 + MLT1E LTR MaLR 1 593 0 537 217 66 25 chr20 51721181 51721308 -20432574 + MIR SINE MIR 56 183 -63 372 289 139 6 chr20 51721366 51721539 -20432343 - MLT1J LTR MaLR -2 509 314 232 254 15 30 chr20 51721628 51721695 -20432187 + LTR16C LTR ERVL 108 173 -318 383 308 45 0 chr20 51721742 51721898 -20431984 + LTR16C LTR ERVL 329 491 0 353 248 97 83 chr20 51722128 51722273 -20431609 - L1ME3 LINE L1 -1 6169 6023 465 286 194 20 chr20 51722355 51722603 -20431279 + L2 LINE L2 2980 3270 -2 837 284 27 43 chr20 51723175 51723432 -20430450 + MIR SINE MIR 7 259 -3 340 233 124 31 chr20 51723468 51723597 -20430285 + MIR SINE MIR 51 191 -71 231 245 85 32 chr20 51723685 51723779 -20430103 - MLT1I LTR MaLR -33 376 278 2347 92 0 0 chr20 51723867 51724171 -20429711 + AluSq SINE Alu 1 304 -9 227 258 32 0 chr20 51724391 51724453 -20429429 - MIR SINE MIR -75 133 70 1138 173 70 163 chr20 51725010 51725137 -20428745 - MER113 DNA MER1_type? -43 478 341 2193 74 0 0 chr20 51725137 51725466 -20428416 - AluY SINE Alu 0 329 1 1138 173 70 163 chr20 51725466 51725517 -20428365 - MER113 DNA MER1_type? -180 341 287 2112 119 3 0 chr20 51725517 51725819 -20428063 + AluSq SINE Alu 1 303 -10 1138 173 70 163 chr20 51725819 51726165 -20427717 - MER113 DNA MER1_type? -234 287 1 191 244 44 0 chr20 51727472 51727517 -20426365 + MIR3 SINE MIR 112 158 -50 304 298 148 54 chr20 51727548 51728000 -20425882 + L2 LINE L2 2766 3251 -21 200 277 192 16 chr20 51728270 51728401 -20425481 - MIR3 SINE MIR -59 149 5 294 321 6 12 chr20 51729179 51729276 -20424606 + (CATA)n Simple_repeat Simple_repeat 1 97 -169 317 237 26 0 chr20 51729276 51729352 -20424530 + MER116 DNA Mariner 3 80 0 294 321 6 12 chr20 51729352 51729447 -20424435 + (CATA)n Simple_repeat Simple_repeat 97 266 0 399 296 0 28 chr20 51729468 51729644 -20424238 + (CATA)n Simple_repeat Simple_repeat 1 171 0 190 309 0 18 chr20 51729669 51729724 -20424158 - MIR SINE MIR -9 253 200 812 189 24 0 chr20 51730167 51730331 -20423551 + LTR57 LTR ERVL 244 411 0 453 220 37 0 chr20 51730368 51730477 -20423405 + LTR57 LTR ERVL 299 411 0 387 269 34 57 chr20 51730495 51730670 -20423212 + MIR SINE MIR 32 202 -60 297 128 0 0 chr20 51731398 51731445 -20422437 + (CA)n Simple_repeat Simple_repeat 1 47 0 358 314 29 52 chr20 51731795 51731967 -20421915 + MIR3 SINE MIR 1 168 -40 396 277 0 4 chr20 51732473 51732603 -20421279 - MIR SINE MIR -56 152 57 295 293 12 0 chr20 51732714 51732796 -20421086 - L3b LINE CR1 -167 1416 1334 327 113 0 0 chr20 51732894 51732947 -20420935 + (TCCC)n Simple_repeat Simple_repeat 3 55 0 * 386 119 0 15 chr20 51732945 51733012 -20420870 + (TTTC)n Simple_repeat Simple_repeat 1 66 0 888 74 40 17 chr20 51733012 51733187 -20420695 + CT-rich Low_complexity Low_complexity 1 179 0 1460 195 17 7 chr20 51733213 51733515 -20420367 - AluJo SINE Alu -7 305 1 2189 96 3 3 chr20 51733526 51733829 -20420053 - AluSx SINE Alu -4 308 6 21 0 0 0 chr20 51733834 51733855 -20420027 + AT_rich Low_complexity Low_complexity 1 21 0 673 298 13 13 chr20 51733974 51734202 -20419680 - L1ME LINE L1 -334 5787 5560 358 224 65 56 chr20 51734566 51734754 -20419128 - L1ME LINE L1 -738 5428 5255 581 316 75 35 chr20 51735015 51735349 -20418533 - L1ME LINE L1 -986 5160 4808 2202 117 0 0 chr20 51735349 51735656 -20418226 - AluSg SINE Alu -3 307 1 581 316 75 35 chr20 51735656 51735694 -20418188 - L1ME LINE L1 -1338 4808 4773 328 140 0 0 chr20 51735705 51735755 -20418127 - Tigger1 DNA MER2_type -17 2401 2352 742 106 38 76 chr20 51735760 51735892 -20417990 - AluJo SINE Alu -173 139 13 14190 124 26 35 chr20 51735895 51736195 -20417687 - Tigger1 DNA MER2_type -79 2339 2038 416 143 0 0 chr20 51736195 51736265 -20417617 - L1PA16 LINE L1 -1 6165 6096 14190 124 26 35 chr20 51736265 51736369 -20417513 - Tigger1 DNA MER2_type -380 2038 1935 1616 196 10 0 chr20 51736369 51736665 -20417217 + AluJo SINE Alu 6 304 -8 14190 124 26 35 chr20 51736665 51738596 -20415286 - Tigger1 DNA MER2_type -483 1935 24 844 241 118 71 chr20 51738753 51739374 -20414508 - L1MC5 LINE L1 -20 7941 7292 308 193 12 36 chr20 51739570 51739653 -20414229 - L1MC5 LINE L1 -730 7231 7151 354 281 74 69 chr20 51739706 51739909 -20413973 - L1ME LINE L1 -1574 4572 4369 1514 163 27 0 chr20 51739921 51740178 -20413704 - MLT1A1 LTR MaLR 0 365 102 272 295 194 8 chr20 51740415 51740544 -20413338 + MIR3 SINE MIR 36 188 -20 273 231 205 34 chr20 51741266 51741383 -20412499 - MIR3 SINE MIR -66 142 6 405 254 51 42 chr20 51741581 51741699 -20412183 + MIR SINE MIR 55 173 -89 366 23 0 0 chr20 51741759 51741802 -20412080 + (TG)n Simple_repeat Simple_repeat 1 43 0 342 218 39 13 chr20 51742060 51742138 -20411744 + MLT1K LTR MaLR 509 588 0 499 297 83 6 chr20 51742385 51742712 -20411170 - L1MC4 LINE L1 0 8042 7691 364 311 87 59 chr20 51742744 51743033 -20410849 - L1ME3A LINE L1 -12 6158 5862 4667 148 25 37 chr20 51743042 51743907 -20409975 - L1MB1 LINE L1 -5 6163 5309 252 156 0 0 chr20 51743916 51743961 -20409921 - LTR66 LTR ERVL -172 438 394 241 174 0 0 chr20 51743921 51743967 -20409915 + LTR66 LTR ERVL 394 439 -171 * 303 305 81 27 chr20 51743973 51744196 -20409686 + L1 LINE L1 4158 4392 -1754 473 191 38 9 chr20 51744199 51744304 -20409578 + L1 LINE L1 5193 5300 -846 248 172 0 16 chr20 51744310 51744374 -20409508 + (TA)n Simple_repeat Simple_repeat 2 64 0 1062 211 19 0 chr20 51744508 51744717 -20409165 + MER20 DNA MER1_type 7 219 0 578 203 14 7 chr20 51744916 51745064 -20408818 - L1ME LINE L1 -2148 3998 3850 2204 129 3 0 chr20 51745707 51746018 -20407864 + AluSx SINE Alu 1 312 0 1826 134 50 17 chr20 51746221 51746520 -20407362 - AluSx SINE Alu -3 309 1 276 53 0 0 chr20 51746892 51746930 -20406952 + (TG)n Simple_repeat Simple_repeat 2 39 0 478 231 30 85 chr20 51747216 51747415 -20406467 - HAL1 LINE L1 -8 2499 2312 21 89 0 0 chr20 51747444 51747500 -20406382 + AT_rich Low_complexity Low_complexity 1 56 0 2811 145 16 25 chr20 51747500 51747984 -20405898 - L1MB1 LINE L1 -1 6167 5688 491 200 10 10 chr20 51747986 51748086 -20405796 + MER20 DNA MER1_type 120 219 0 226 319 0 29 chr20 51748087 51748156 -20405726 + L2 LINE L2 2579 2645 -669 268 335 6 98 chr20 51748230 51748394 -20405488 + L2 LINE L2 2911 3059 -213 472 292 70 0 chr20 51748488 51748659 -20405223 - L1MC4 LINE L1 -145 7897 7715 5067 156 23 16 chr20 51748662 51750327 -20403555 - L1MA8 LINE L1 -138 6153 4484 3931 235 92 31 chr20 51750350 51750387 -20403495 - L1M1 LINE L1 -4289 2817 2784 758 213 0 0 chr20 51750387 51750509 -20403373 - FLAM_A SINE Alu -11 122 1 3931 235 92 31 chr20 51750509 51752562 -20401320 - L1M1 LINE L1 -4322 2784 902 1232 216 19 62 chr20 51752583 51752907 -20400975 + MER74A LTR ERVL 248 557 -1 866 214 0 0 chr20 51753132 51753305 -20400577 - AluSg/x SINE Alu -2 308 136 1342 268 51 33 chr20 51753335 51753787 -20400095 + LTR16B LTR ERVL 2 461 -3 466 261 37 5 chr20 51753900 51754088 -20399794 + Charlie2 DNA MER1_type 2634 2827 -35 227 161 54 71 chr20 51754788 51754844 -20399038 - MIR3 SINE MIR -38 170 116 575 27 14 0 chr20 51756265 51756338 -20397544 + (TCTA)n Simple_repeat Simple_repeat 3 76 0 21558 64 9 3 chr20 51756419 51759067 -20394815 - HERVL-A1 LTR ERVL -2989 2665 1 3335 73 22 36 chr20 51759067 51759517 -20394365 - MLT2A1 LTR ERVL 0 444 1 1285 213 10 16 chr20 51759517 51759827 -20394055 - L1 LINE L1 -1540 6025 5718 * 4770 161 32 5 chr20 51759825 51760616 -20393266 - L1 LINE L1 -6738 827 16 669 218 62 59 chr20 51760655 51760944 -20392938 - L1MC4a LINE L1 -1595 6213 5924 655 237 26 38 chr20 51760951 51761155 -20392727 - L1MC4a LINE L1 -307 5814 5678 25 31 0 0 chr20 51762748 51762780 -20391102 + AT_rich Low_complexity Low_complexity 1 32 0 874 167 60 5 chr20 51762780 51762981 -20390901 - L1MA9 LINE L1 -25 6274 6066 2501 292 42 9 chr20 51762997 51763750 -20390132 + L1M4b LINE L1 74 851 -6008 307 371 20 25 chr20 51764353 51764550 -20389332 + L1MC/D LINE L1 5266 5461 -2347 2337 117 0 0 chr20 51764818 51765127 -20388755 - AluSx SINE Alu -3 309 1 297 354 106 6 chr20 51765325 51765486 -20388396 + MIR3 SINE MIR 16 192 -16 313 300 65 18 chr20 51767387 51767557 -20386325 - LTR16A LTR ERVL -72 378 201 252 0 0 0 chr20 51769539 51769567 -20384315 + (CA)n Simple_repeat Simple_repeat 2 29 0 756 346 9 15 chr20 51769582 51769914 -20383968 + L1M4b LINE L1 924 1253 -5625 1536 262 20 53 chr20 51770874 51771264 -20382618 + L1M1 LINE L1 1860 2261 -5304 2758 109 5 5 chr20 51771264 51771639 -20382243 + THE1C LTR MaLR 1 375 0 11264 109 14 30 chr20 51771639 51773245 -20380637 + THE1C-int LTR MaLR 1 1580 0 2482 95 7 97 chr20 51773245 51773657 -20380225 + THE1C LTR MaLR 1 375 0 1536 262 20 53 chr20 51773657 51773814 -20380068 + L1M1 LINE L1 2258 2391 -5174 5028 228 32 31 chr20 51773855 51774942 -20378940 + L1M4c LINE L1 147 1234 -5419 4473 239 58 40 chr20 51774931 51776870 -20377012 + L1M4b LINE L1 1405 3089 -3868 * 5286 196 38 12 chr20 51776868 51778045 -20375837 + L1 LINE L1 3935 5142 -1004 956 173 92 129 chr20 51778045 51778340 -20375542 - AluJo SINE Alu -20 292 9 3203 226 18 15 chr20 51778357 51779230 -20374652 - L1 LINE L1 -2366 3780 2905 619 228 0 0 chr20 51779226 51779353 -20374529 + L1 LINE L1 4912 5038 -1108 * 234 167 0 0 chr20 51779361 51779397 -20374485 - L1P LINE L1 -3261 2885 2850 205 259 12 62 chr20 51780055 51780136 -20373746 - MIR SINE MIR -84 124 48 2065 218 108 64 chr20 51780304 51780702 -20373180 + L1M4c LINE L1 1413 1792 -4942 230 174 43 0 chr20 51780702 51780748 -20373134 - MER105 DNA DNA -117 87 40 2065 218 108 64 chr20 51780748 51781111 -20372771 + L1M4c LINE L1 1792 2254 -4480 8185 214 15 21 chr20 51781181 51783984 -20369898 + L1PA15 LINE L1 1303 4103 -2694 7715 44 8 0 chr20 51783984 51785029 -20368853 + L1PA5 LINE L1 5104 6146 -8 9395 205 28 6 chr20 51785046 51787709 -20366173 + L1PA15 LINE L1 4118 6813 -3 640 271 98 20 chr20 51787709 51787957 -20365925 + L1MC/D LINE L1 5470 5740 -2068 186 43 0 0 chr20 51788019 51788042 -20365840 + (TC)n Simple_repeat Simple_repeat 1 23 0 733 271 49 86 chr20 51788257 51788689 -20365193 - L1ME3A LINE L1 -234 5936 5521 1947 233 30 58 chr20 51788709 51788843 -20365039 + L1ME3A LINE L1 5263 5399 -771 2130 122 34 0 chr20 51788843 51789138 -20364744 + AluSq SINE Alu 1 305 -8 1947 233 30 58 chr20 51789138 51789727 -20364155 + L1ME3A LINE L1 5399 5966 -204 291 249 84 80 chr20 51790202 51790427 -20363455 - MLT1K LTR MaLR -2 586 361 377 20 20 0 chr20 51790557 51790607 -20363275 + (CA)n Simple_repeat Simple_repeat 1 51 0 184 300 70 50 chr20 51791053 51791153 -20362729 + MIR SINE MIR 21 122 -140 187 328 50 34 chr20 51793888 51794007 -20359875 + MIR3 SINE MIR 4 124 -84 300 290 58 51 chr20 51794381 51794519 -20359363 - MIR SINE MIR -57 205 67 25 0 0 0 chr20 51794764 51794789 -20359093 + AT_rich Low_complexity Low_complexity 1 25 0 311 314 55 55 chr20 51794960 51795180 -20358702 + L1M4 LINE L1 4735 4954 -1192 634 332 47 40 chr20 51795845 51796294 -20357588 - L1M3a LINE L1 -5503 452 1 1279 91 157 0 chr20 51797696 51797893 -20355989 - MER30 DNA MER1_type 0 230 3 2533 60 0 0 chr20 51797894 51798196 -20355686 + AluY SINE Alu 1 302 -9 327 286 39 45 chr20 51798743 51798897 -20354985 - MIR3 SINE MIR -21 187 35 213 348 22 11 chr20 51799216 51799308 -20354574 - MIR3 SINE MIR -23 185 93 2312 101 3 0 chr20 51799358 51799655 -20354227 + AluSx SINE Alu 1 298 -14 281 206 0 16 chr20 51799894 51799957 -20353925 - Tigger3b DNA MER2_type 0 1241 1180 5545 141 37 40 chr20 51800193 51800792 -20353090 - Tigger3b DNA MER2_type -1867 1161 566 2382 93 0 3 chr20 51800792 51801102 -20352780 + AluY SINE Alu 1 309 -2 5545 141 37 40 chr20 51801102 51801649 -20352233 - Tigger3b DNA MER2_type -2462 566 19 365 307 38 52 chr20 51801765 51801977 -20351905 - L1ME3A LINE L1 -2340 5468 5260 2919 165 60 39 chr20 51802532 51803246 -20350636 - L1MC1 LINE L1 -97 7685 6134 310 323 39 39 chr20 51803260 51803489 -20350393 + L1M4 LINE L1 2381 2609 -3537 403 306 88 5 chr20 51803562 51803778 -20350104 + L1M4 LINE L1 3081 3314 -2832 275 269 115 66 chr20 51804664 51804846 -20349036 + LTR16A LTR ERVL 258 448 -2 263 383 85 0 chr20 51806702 51806843 -20347039 - MIR3 SINE MIR -16 192 40 357 286 16 68 chr20 51807331 51807523 -20346359 - L1MC/D LINE L1 -2370 6249 6068 312 313 104 46 chr20 51807673 51807980 -20345902 - L1MC/D LINE L1 -1088 5869 5545 2556 287 35 25 chr20 51808104 51808163 -20345719 - L1MC/D LINE L1 -6005 854 797 2405 91 0 0 chr20 51808163 51808461 -20345421 - AluSc SINE Alu -11 298 1 2556 287 35 25 chr20 51808461 51809242 -20344640 - L1MC/D LINE L1 -6062 797 6 659 213 30 6 chr20 51809263 51809432 -20344450 + L1MA9 LINE L1 6102 6274 -38 21 57 0 0 chr20 51809432 51809467 -20344415 + AT_rich Low_complexity Low_complexity 1 35 0 215 239 30 15 chr20 51810187 51810254 -20343628 + MIR SINE MIR 57 124 -84 26 30 0 0 chr20 51810266 51810299 -20343583 + AT_rich Low_complexity Low_complexity 1 33 0 856 272 104 25 chr20 51811124 51811606 -20342276 + L1MC4a LINE L1 5694 6213 -1595 7690 25 0 0 chr20 51811782 51813330 -20340552 - L1PA3 LINE L1 -3 6152 4605 260 276 82 31 chr20 51813458 51813556 -20340326 - MIR3 SINE MIR -19 189 87 4446 117 11 20 chr20 51813889 51814597 -20339285 - L1PA16 LINE L1 -5 6161 5460 2163 244 24 28 chr20 51814603 51815271 -20338611 + L1PBa LINE L1 848 1512 -5351 * 4717 280 41 4 chr20 51815269 51816870 -20337012 - L1M2c LINE L1 -5361 1428 11 3320 216 14 10 chr20 51816878 51817788 -20336094 - L1M3e LINE L1 -2695 4870 3957 1908 212 43 0 chr20 51817790 51818182 -20335700 + MSTB LTR MaLR 1 409 -17 2407 219 51 114 chr20 51818198 51818638 -20335244 - L1 LINE L1 -3606 3959 3493 240 35 0 0 chr20 51818638 51818667 -20335215 + (TTTC)n Simple_repeat Simple_repeat 3 31 0 2407 219 51 114 chr20 51818667 51819334 -20334548 - L1 LINE L1 -4072 3493 2786 2711 159 2 11 chr20 51819334 51819807 -20334075 + L1PA16 LINE L1 5698 6166 0 2407 219 51 114 chr20 51819807 51820082 -20333800 - L1 LINE L1 -4779 2786 2495 246 125 18 0 chr20 51820082 51820138 -20333744 - LTR66 LTR ERVL -171 439 383 2407 219 51 114 chr20 51820138 51820751 -20333131 - L1 LINE L1 -5070 2495 2034 315 198 99 54 chr20 51820772 51820883 -20332999 - L1M3e LINE L1 -5112 2377 2262 1034 307 28 0 chr20 51821148 51821510 -20332372 - L1M3e LINE L1 -6645 844 473 274 351 173 13 chr20 51822747 51823140 -20330742 + L2 LINE L2 1621 2076 -1238 261 322 62 0 chr20 51825603 51825749 -20328133 - Charlie7 DNA MER1_type -2455 157 3 299 370 22 15 chr20 51826940 51827075 -20326807 + MIR3 SINE MIR 20 155 -53 628 164 18 24 chr20 51827121 51827286 -20326596 + GA-rich Low_complexity Low_complexity 2 165 0 648 159 35 0 chr20 51827972 51828117 -20325765 + GA-rich Low_complexity Low_complexity 4 153 0 227 86 0 29 chr20 51828118 51828153 -20325729 + (GGGA)n Simple_repeat Simple_repeat 1 34 0 929 148 12 17 chr20 51828153 51828686 -20325196 + GA-rich Low_complexity Low_complexity 1 529 0 922 238 124 30 chr20 51829283 51829774 -20324108 - L1ME2 LINE L1 0 6662 6126 467 259 38 72 chr20 51829771 51830064 -20323818 - L1ME2 LINE L1 -921 5723 5441 * 845 189 26 5 chr20 51830078 51830268 -20323614 - L1M4 LINE L1 -450 5728 5535 1191 208 113 20 chr20 51830269 51830677 -20323205 - L1ME2 LINE L1 -4902 1640 1195 3881 160 1 18 chr20 51830695 51831545 -20322337 + L1P5 LINE L1 4517 5349 -802 2392 58 0 49 chr20 51831545 51831871 -20322011 + AluY SINE Alu 1 310 -1 3881 160 1 18 chr20 51831871 51832307 -20321575 + L1P5 LINE L1 5349 5791 -360 261 130 13 26 chr20 51832307 51832384 -20321498 + (TA)n Simple_repeat Simple_repeat 1 76 0 285 291 0 0 chr20 51832385 51832471 -20321411 - L1M1 LINE L1 -4519 3047 2962 2170 144 0 24 chr20 51832491 51832867 -20321015 + L1PB1 LINE L1 5782 6148 -3 1234 257 31 44 chr20 51832877 51833282 -20320600 + L1M4 LINE L1 4182 4580 -1566 2165 112 26 3 chr20 51833282 51833587 -20320295 - AluSx SINE Alu 0 312 1 1234 257 31 44 chr20 51833587 51833729 -20320153 + L1M4 LINE L1 4580 4722 -1424 665 104 16 8 chr20 51833734 51833859 -20320023 - L1M2 LINE L1 -4206 3359 3234 1250 198 28 10 chr20 51833860 51834148 -20319734 - L1M1 LINE L1 -7260 305 13 1722 203 13 0 chr20 51834149 51834523 -20319359 - L1M2 LINE L1 -4289 3277 2899 * 2269 329 22 18 chr20 51834520 51835592 -20318290 - L1M2 LINE L1 -5178 2388 1552 2390 60 0 0 chr20 51836433 51836761 -20317121 + AluY SINE Alu 1 328 0 262 42 42 21 chr20 51836803 51836851 -20317031 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 259 345 162 16 chr20 51837076 51837458 -20316424 + L2 LINE L2 1637 2074 -1240 207 352 38 9 chr20 51837582 51837687 -20316195 + MIR3 SINE MIR 67 174 -34 261 288 68 7 chr20 51840287 51840433 -20313449 - Charlie7 DNA MER1_type -2455 157 3 223 348 52 26 chr20 51841644 51841759 -20312123 + MIR SINE MIR 19 136 -72 282 179 0 36 chr20 51841827 51841911 -20311971 + GA-rich Low_complexity Low_complexity 2 82 0 795 116 9 37 chr20 51841911 51842132 -20311750 + (GAAA)n Simple_repeat Simple_repeat 1 214 0 226 212 71 35 chr20 51842549 51842634 -20311248 + MIR SINE MIR 110 197 -65 28 0 0 0 chr20 51842686 51842714 -20311168 + AT_rich Low_complexity Low_complexity 1 28 0 1014 251 96 24 chr20 51842717 51843218 -20310664 - L1ME2 LINE L1 0 6662 6126 363 282 94 26 chr20 51843215 51843235 -20310647 - L1ME2 LINE L1 -921 5723 5706 * 189 0 0 0 chr20 51843235 51843256 -20310626 + (TTTTG)n Simple_repeat Simple_repeat 3 23 0 363 282 94 26 chr20 51843256 51843469 -20310413 - L1ME2 LINE L1 -938 5706 5474 400 191 53 0 chr20 51843519 51843613 -20310269 - L1M4 LINE L1 -448 5726 5628 * 1945 220 40 19 chr20 51843609 51844341 -20309541 - L1ME2 LINE L1 -1160 5484 4713 * 2043 245 118 23 chr20 51844338 51844599 -20309283 - L1ME2 LINE L1 -4654 1992 1757 2215 106 7 3 chr20 51844599 51844891 -20308991 + AluSg SINE Alu 1 293 -17 2043 245 118 23 chr20 51844891 51845724 -20308158 - L1ME2 LINE L1 -4889 1757 815 903 75 42 0 chr20 51847678 51847798 -20306084 - AluSg/x SINE Alu -14 298 174 433 248 65 37 chr20 51849383 51849597 -20304285 - Charlie2 DNA MER1_type -38 2824 2605 1994 108 111 42 chr20 51849631 51849991 -20303891 + MER52C LTR ERV1 894 1278 0 6317 219 140 16 chr20 51849991 51853338 -20300544 - L1 LINE L1 -3027 3761 5 393 229 110 44 chr20 51853351 51853578 -20300304 - L1M1 LINE L1 -4357 3208 2967 1317 166 97 8 chr20 51853605 51853864 -20300018 + MER1B DNA MER1_type 58 339 0 1496 212 22 14 chr20 51853864 51854223 -20299659 - L1M1 LINE L1 -4587 2978 2617 425 323 31 0 chr20 51854598 51854728 -20299154 + MIR3 SINE MIR 5 138 -70 685 132 35 17 chr20 51854798 51854972 -20298910 + GA-rich Low_complexity Low_complexity 3 179 0 226 192 19 19 chr20 51855369 51855421 -20298461 + MER99 DNA DNA 269 320 -508 1761 145 76 3 chr20 51855502 51855791 -20298091 - AluSx SINE Alu -2 310 1 539 239 72 45 chr20 51855946 51856168 -20297714 - L1ME2 LINE L1 -2 6162 5935 1752 131 77 15 chr20 51856469 51856743 -20297139 - AluSx SINE Alu -17 295 5 2277 217 88 14 chr20 51857086 51857680 -20296202 + MER99 DNA DNA 2 639 -189 443 272 64 0 chr20 51857749 51857765 -20296117 - L1M4 LINE L1 -1987 4159 4145 2210 129 0 3 chr20 51857765 51858075 -20295807 + AluSq SINE Alu 2 310 -3 443 272 64 0 chr20 51858075 51858183 -20295699 - L1M4 LINE L1 -2001 4145 4027 653 243 22 39 chr20 51858233 51858414 -20295468 - MER97a DNA MER1_type? -715 179 2 1202 289 106 4 chr20 51858421 51858923 -20294959 - L1M4 LINE L1 -2121 4025 3473 297 336 28 0 chr20 51858985 51859092 -20294790 - MER58 DNA MER1_type -2142 278 169 4005 224 34 12 chr20 51859190 51861084 -20292798 - L1MB7 LINE L1 -17 6665 4726 309 183 0 0 chr20 51861086 51861146 -20292736 + (TA)n Simple_repeat Simple_repeat 1 60 0 226 116 47 0 chr20 51861146 51861189 -20292693 + LTR66 LTR ERVL 395 439 -171 236 174 0 0 chr20 51861200 51861246 -20292636 + LTR66 LTR ERVL 395 440 -170 4870 239 66 40 chr20 51861252 51863120 -20290762 - L1MB7 LINE L1 -4654 1992 70 856 147 7 0 chr20 51863121 51863257 -20290625 + Tigger4(Zombi) DNA MER2_type 1 137 -2594 5611 125 14 1 chr20 51863265 51864112 -20289770 + Tigger4(Zombi) DNA MER2_type 1873 2730 -1 643 296 30 21 chr20 51864243 51864571 -20289311 - L1M4 LINE L1 -2193 3953 3623 9696 191 29 23 chr20 51865210 51867599 -20286283 + L1M2 LINE L1 2636 5039 -1809 815 125 52 7 chr20 51867599 51867735 -20286147 - LTR13 LTR ERVK -9 998 857 306 187 27 0 chr20 51867735 51867810 -20286072 - L1 LINE L1 -958 5188 5112 241 230 35 69 chr20 51868803 51868890 -20284992 - L2 LINE L2 0 3272 3189 233 219 78 102 chr20 51869263 51869391 -20284491 - MIR SINE MIR -65 143 28 333 0 0 0 chr20 51870740 51870777 -20283105 + (GA)n Simple_repeat Simple_repeat 1 37 0 235 259 35 0 chr20 51871643 51871701 -20282181 + L2 LINE L2 3195 3254 -18 232 240 0 67 chr20 51871730 51871805 -20282077 + MIR SINE MIR 106 175 -87 1538 140 4 28 chr20 51872145 51872415 -20281467 + AluJo SINE Alu 42 305 0 207 0 0 0 chr20 51872905 51872928 -20280954 + (TC)n Simple_repeat Simple_repeat 2 24 0 2204 133 0 7 chr20 51873010 51873318 -20280564 + AluSx SINE Alu 1 306 -6 241 346 31 31 chr20 51873510 51873555 -20280327 - MIR3 SINE MIR -10 198 154 845 194 124 35 chr20 51873555 51873756 -20280126 + MER58A DNA MER1_type 5 223 -1 241 346 31 31 chr20 51873756 51873840 -20280042 - MIR3 SINE MIR -53 155 69 1831 124 73 0 chr20 51873965 51874239 -20279643 + AluSq SINE Alu 1 294 -19 218 260 26 52 chr20 51874307 51874384 -20279498 - L2 LINE L2 -7 3306 3232 280 246 127 48 chr20 51874446 51874572 -20279310 + MIR SINE MIR 91 226 -36 501 111 37 19 chr20 51874762 51874870 -20279012 + (TAGA)n Simple_repeat Simple_repeat 1 110 0 295 56 0 0 chr20 51874875 51874911 -20278971 + MLT2C1 LTR ERVL 359 394 -3 1249 213 54 17 chr20 51875063 51875359 -20278523 + MER45C DNA AcHobo 647 953 0 228 245 53 21 chr20 51877007 51877101 -20276781 - MIR SINE MIR -56 206 110 453 227 128 47 chr20 51877317 51877489 -20276393 + MIR3 SINE MIR 9 194 -14 385 238 98 8 chr20 51877597 51877719 -20276163 - MIR SINE MIR -102 160 28 237 340 113 0 chr20 51877888 51878038 -20275844 - MLT1K LTR MaLR -107 481 315 390 323 65 35 chr20 51878100 51878301 -20275581 - MLT1K LTR MaLR -372 216 10 584 290 46 44 chr20 51879035 51879341 -20274541 - L1MEd LINE L1 -4862 1257 948 3537 138 23 20 chr20 51879341 51879901 -20273981 - L1PA15 LINE L1 -6 6159 5598 584 290 46 44 chr20 51879901 51879960 -20273922 - L1MEd LINE L1 -5171 948 891 886 114 0 0 chr20 51880388 51880511 -20273371 + FLAM_C SINE Alu 21 143 0 288 288 0 12 chr20 51881391 51881471 -20272411 + MIR SINE MIR 20 98 -164 392 307 29 0 chr20 51881486 51881626 -20272256 - MIR SINE MIR -8 254 111 533 318 92 27 chr20 51881916 51882473 -20271409 - L1M4 LINE L1 -1112 5034 4442 603 330 28 30 chr20 51882519 51882953 -20270929 - L1M4 LINE L1 -1896 4250 3818 206 61 0 30 chr20 51882953 51882986 -20270896 + (TTTA)n Simple_repeat Simple_repeat 3 34 0 1211 185 20 54 chr20 51883033 51883331 -20270551 - L1MC4 LINE L1 0 8042 7755 1289 211 16 75 chr20 51884232 51884383 -20269499 + AluJo SINE Alu 1 159 -143 1152 83 11 11 chr20 51884383 51884563 -20269319 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 729 0 0 0 chr20 51884564 51884645 -20269237 + (GGAAA)n Simple_repeat Simple_repeat 1 81 0 1289 211 16 75 chr20 51884645 51884809 -20269073 + AluJo SINE Alu 158 299 -3 290 273 91 9 chr20 51885322 51885432 -20268450 + LTR67 LTR ERVL 439 557 0 300 293 20 20 chr20 51885439 51885538 -20268344 - MIR SINE MIR -148 114 16 2560 230 22 2 chr20 51885617 51886125 -20267757 - LTR53 LTR ERVL -1 518 1 1825 187 0 0 chr20 51886739 51887044 -20266838 + AluJb SINE Alu 1 305 -7 758 158 127 48 chr20 51887752 51887917 -20265965 + AluJo SINE Alu 121 298 -14 380 285 39 8 chr20 51888381 51888511 -20265371 - MIR3 SINE MIR -1 207 74 371 333 73 17 chr20 51888709 51888943 -20264939 + MIR SINE MIR 16 262 0 252 320 10 48 chr20 51889244 51889347 -20264535 + MIR3 SINE MIR 94 192 -16 424 346 97 5 chr20 51889700 51889885 -20263997 + L2 LINE L2 3050 3251 -21 347 318 9 9 chr20 51889884 51889991 -20263891 + L2 LINE L2 3190 3296 -17 * 236 163 0 23 chr20 51890320 51890363 -20263519 - 7SK RNA RNA -127 66 25 4181 191 23 57 chr20 51890968 51892006 -20261876 - L1ME2 LINE L1 -16 6148 5153 284 291 12 12 chr20 51892134 51892220 -20261662 - MIR SINE MIR -70 192 107 344 291 33 67 chr20 51892639 51892998 -20260884 - L1ME4a LINE L1 -257 5864 5522 412 254 40 69 chr20 51893165 51893338 -20260544 + MIR SINE MIR 24 191 -71 2428 82 0 0 chr20 51893503 51893806 -20260076 + AluSp SINE Alu 1 303 -10 243 0 0 0 chr20 51893910 51893937 -20259945 + (T)n Simple_repeat Simple_repeat 1 27 0 1750 159 28 74 chr20 51894139 51894214 -20259668 + L1MC3 LINE L1 7319 7396 -389 2235 111 3 7 chr20 51894214 51894521 -20259361 + AluSx SINE Alu 1 306 -6 1750 159 28 74 chr20 51894521 51894917 -20258965 + L1MC3 LINE L1 7396 7771 -14 336 198 12 37 chr20 51894836 51894917 -20258965 + L1MC2 LINE L1 6247 6325 -19 2555 225 22 68 chr20 51894985 51895044 -20258838 + L2 LINE L2 1764 1824 -1490 2644 119 11 28 chr20 51895044 51895286 -20258596 - MSTA LTR MaLR 0 428 195 2510 88 3 0 chr20 51895286 51895593 -20258289 - AluSq SINE Alu -5 308 1 2644 119 11 28 chr20 51895593 51895785 -20258097 - MSTA LTR MaLR -233 195 1 2555 225 22 68 chr20 51895785 51896150 -20257732 + L2 LINE L2 1824 2136 -1178 2426 109 0 0 chr20 51896150 51896500 -20257382 - L1PA13 LINE L1 0 6163 5814 2555 225 22 68 chr20 51896500 51896884 -20256998 + L2 LINE L2 2136 2536 -778 267 269 250 0 chr20 51897483 51897587 -20256295 + MIR SINE MIR 133 262 0 420 293 37 65 chr20 51897617 51897832 -20256050 - MIR SINE MIR -53 209 1 1950 121 89 0 chr20 51897913 51898194 -20255688 + AluSx SINE Alu 1 306 -6 1800 143 32 51 chr20 51898374 51898688 -20255194 + AluJb SINE Alu 1 308 -4 229 321 0 19 chr20 51899335 51899441 -20254441 + MIR SINE MIR 142 245 -17 685 155 19 0 chr20 51899573 51899890 -20253992 + (CA)n Simple_repeat Simple_repeat 1 323 0 349 318 11 0 chr20 51900186 51900322 -20253560 + MIR SINE MIR 23 160 -61 266 304 43 17 chr20 51900704 51900819 -20253063 + MIR SINE MIR 93 210 -52 1869 185 0 0 chr20 51900827 51901119 -20252763 + AluJb SINE Alu 1 292 -20 298 268 10 10 chr20 51901205 51901302 -20252580 + L1MC/D LINE L1 5732 5828 -1980 262 158 0 53 chr20 51901307 51901364 -20252518 - LTR67 LTR ERVL -7 550 497 2241 104 0 0 chr20 51901498 51901811 -20252071 + AluSc SINE Alu 1 313 0 485 253 82 94 chr20 51902010 51902243 -20251639 - MIR SINE MIR -2 260 31 1956 164 7 0 chr20 51902381 51902680 -20251202 - AluSx SINE Alu -11 301 1 846 190 45 0 chr20 51902940 51903119 -20250763 - MER5A DNA MER1_type 0 189 3 2437 86 3 3 chr20 51903150 51903453 -20250429 - AluSq SINE Alu -2 311 9 430 202 89 1 chr20 51903896 51904051 -20249831 - MER3 DNA MER1_type -15 194 3 432 321 61 41 chr20 51904062 51904258 -20249624 + L2 LINE L2 3103 3302 -11 410 302 127 5 chr20 51904678 51904867 -20249015 + MIR SINE MIR 31 242 -20 183 274 20 0 chr20 51905282 51905333 -20248549 + MER5A DNA MER1_type 39 90 -99 290 304 15 22 chr20 51905509 51905644 -20248238 + L2 LINE L2 2951 3084 -188 2369 97 3 3 chr20 51905888 51906198 -20247684 - AluSg SINE Alu 0 310 1 278 292 92 8 chr20 51906411 51906531 -20247351 + MIR3 SINE MIR 33 162 -46 212 219 0 0 chr20 51907407 51907448 -20246434 - MIR SINE MIR -175 87 47 355 229 46 11 chr20 51907794 51907887 -20245995 + MIR3 SINE MIR 67 162 -46 192 283 0 0 chr20 51908218 51908271 -20245611 + MIR SINE MIR 10 62 -200 1430 206 120 24 chr20 51908272 51908390 -20245492 + MLT1D LTR MaLR 1 106 -361 2465 74 0 7 chr20 51908390 51908688 -20245194 + AluSp SINE Alu 1 296 -17 1430 206 120 24 chr20 51908688 51909008 -20244874 + MLT1D LTR MaLR 106 460 -7 539 250 60 36 chr20 51909008 51909176 -20244706 + MIR SINE MIR 58 229 -33 242 306 197 0 chr20 51909207 51909354 -20244528 - MIR SINE MIR -2 260 85 379 273 76 8 chr20 51910635 51910767 -20243115 + MIR SINE MIR 15 155 -107 192 77 0 0 chr20 51910803 51910829 -20243053 + (TG)n Simple_repeat Simple_repeat 1 26 0 582 228 181 0 chr20 51910850 51910999 -20242883 - MER5A DNA MER1_type -3 186 11 698 190 55 12 chr20 51911002 51911165 -20242717 + MER3 DNA MER1_type 2 124 -85 3134 143 9 42 chr20 51911232 51911777 -20242105 + MER1A DNA MER1_type 1 527 0 871 227 0 26 chr20 51911801 51911930 -20241952 + MER5A DNA MER1_type 1 125 -64 2118 114 37 0 chr20 51911930 51912227 -20241655 - AluY SINE Alu -3 308 1 871 227 0 26 chr20 51912227 51912291 -20241591 + MER5A DNA MER1_type 125 189 0 356 188 38 0 chr20 51912359 51912439 -20241443 + HsTC2 DNA Tc2 1812 1894 -4 2508 81 0 0 chr20 51912474 51912782 -20241100 + AluY SINE Alu 1 308 -3 256 270 90 36 chr20 51913085 51913196 -20240686 - MIR3 SINE MIR -11 197 81 296 242 30 20 chr20 51913308 51913407 -20240475 + (TA)n Simple_repeat Simple_repeat 1 100 0 1808 114 98 4 chr20 51913408 51913672 -20240210 - AluSx SINE Alu -23 289 1 324 311 166 7 chr20 51914177 51914328 -20239554 - MER5A DNA MER1_type -6 183 9 221 200 40 0 chr20 51915218 51915268 -20238614 - MIR SINE MIR -1 261 210 315 104 0 0 chr20 51915279 51915327 -20238555 + (CACCAT)n Simple_repeat Simple_repeat 5 52 0 326 214 0 0 chr20 51915404 51915474 -20238408 - MIR SINE MIR -1 261 192 556 259 119 30 chr20 51915477 51915713 -20238169 - MIR SINE MIR 0 262 6 338 316 108 35 chr20 51915937 51915981 -20237901 - L2 LINE L2 -218 3054 3015 1196 226 43 94 chr20 51915981 51916148 -20237734 + MLT1A2 LTR MaLR 1 175 -199 1940 144 41 0 chr20 51916148 51916440 -20237442 + AluSx SINE Alu 1 304 -8 1196 226 43 94 chr20 51916440 51916495 -20237387 + MLT1A2 LTR MaLR 175 231 -143 312 83 0 0 chr20 51916495 51916543 -20237339 + (TG)n Simple_repeat Simple_repeat 2 49 0 1196 226 43 94 chr20 51916543 51916713 -20237169 + MLT1A2 LTR MaLR 231 374 0 338 316 108 35 chr20 51916713 51916899 -20236983 - L2 LINE L2 -257 3015 2807 332 274 126 5 chr20 51916910 51917133 -20236749 + MER112 DNA MER1_type 1 250 -10 212 338 70 7 chr20 51917139 51917281 -20236601 - L2 LINE L2 -526 2788 2638 211 242 17 87 chr20 51918151 51918251 -20235631 + MIR SINE MIR 93 180 -28 201 291 18 0 chr20 51918374 51918429 -20235453 + GA-rich Low_complexity Low_complexity 1 56 0 219 354 0 0 chr20 51918899 51918978 -20234904 + MIR SINE MIR 170 248 -14 862 101 0 0 chr20 51919043 51919152 -20234730 + FLAM_C SINE Alu 15 123 -20 2435 95 0 0 chr20 51919341 51919645 -20234237 + AluSx SINE Alu 1 304 -8 568 268 85 25 chr20 51921589 51921824 -20232058 - MER102b DNA MER1_type -5 336 88 291 123 10 30 chr20 51921874 51921942 -20231940 - MIR SINE MIR -62 146 82 2351 93 0 3 chr20 51922343 51922645 -20231237 - AluSx SINE Alu -11 301 1 532 299 16 16 chr20 51922722 51922909 -20230973 - MIR SINE MIR -30 232 46 196 272 272 0 chr20 51923553 51923656 -20230226 - MIR SINE MIR -59 149 19 529 259 25 19 chr20 51924208 51924366 -20229516 - MIR3 SINE MIR -8 200 42 954 268 60 100 chr20 51926478 51926865 -20227017 - L2 LINE L2 0 3313 2912 2348 68 7 3 chr20 51926865 51927157 -20226725 + AluSx SINE Alu 1 293 -19 954 268 60 100 chr20 51927157 51927381 -20226501 - L2 LINE L2 -401 2912 2766 1690 173 16 29 chr20 51927381 51927687 -20226195 + AluJb SINE Alu 11 312 0 954 268 60 100 chr20 51927687 51927967 -20225915 - L2 LINE L2 -547 2766 2476 1739 163 0 58 chr20 51929252 51929565 -20224317 + AluJb SINE Alu 5 299 -13 965 117 0 6 chr20 51929824 51930003 -20223879 + (CCCTAA)n Simple_repeat Simple_repeat 1 178 0 280 268 0 14 chr20 51930159 51930230 -20223652 - MIR SINE MIR -37 225 156 2278 125 0 0 chr20 51931341 51931644 -20222238 + AluSq SINE Alu 1 303 -10 2197 113 3 7 chr20 51932000 51932302 -20221580 + AluSg SINE Alu 1 301 -9 183 80 0 0 chr20 51932320 51932345 -20221537 + (GA)n Simple_repeat Simple_repeat 2 26 0 303 296 112 28 chr20 51932347 51932526 -20221356 + L1M4 LINE L1 3073 3266 -2880 403 97 139 14 chr20 51935817 51935889 -20217993 - MER45A DNA AcHobo -1 177 97 299 238 191 16 chr20 51935880 51936006 -20217876 - MER45A DNA AcHobo -30 148 1 * 230 309 114 32 chr20 51936080 51936203 -20217679 + L2 LINE L2 3163 3295 -18 1457 122 7 86 chr20 51936325 51936448 -20217434 + AluJo SINE Alu 21 111 -201 2543 52 0 7 chr20 51936448 51936758 -20217124 + AluY SINE Alu 1 308 -3 1457 122 7 86 chr20 51936758 51936913 -20216969 + AluJo SINE Alu 111 277 -35 461 263 0 88 chr20 51936994 51937039 -20216843 + MER5B DNA MER1_type 20 67 -111 2376 82 0 26 chr20 51937039 51937343 -20216539 + AluSx SINE Alu 1 296 -16 461 263 0 88 chr20 51937343 51937468 -20216414 + MER5B DNA MER1_type 67 175 -3 283 183 192 25 chr20 51937474 51937576 -20216306 - MIR SINE MIR -59 149 50 198 103 0 0 chr20 51937790 51937819 -20216063 + (TTTC)n Simple_repeat Simple_repeat 2 30 0 2125 123 7 32 chr20 51937963 51938273 -20215609 + AluSx SINE Alu 1 302 -10 1211 123 12 0 chr20 51938275 51938446 -20215436 + AluSg/x SINE Alu 133 305 -5 664 191 85 21 chr20 51938618 51938759 -20215123 - MLT1E1 LTR MaLR -500 154 5 477 162 0 0 chr20 51938901 51938975 -20214907 + tRNA-Val-GTG tRNA tRNA 1 74 -2 2302 119 0 0 chr20 51939055 51939357 -20214525 + AluSx SINE Alu 1 302 -10 2419 197 35 16 chr20 51939497 51940014 -20213868 + MLT1F LTR MaLR 8 534 -8 1935 64 0 8 chr20 51940024 51940260 -20213622 - AluY SINE Alu -8 303 70 191 227 23 0 chr20 51940308 51940352 -20213530 - MIR SINE MIR -1 261 217 951 187 25 15 chr20 51940454 51940652 -20213230 + MER3 DNA MER1_type 10 209 0 723 240 45 20 chr20 51940883 51941083 -20212799 + MIR SINE MIR 30 234 -28 554 209 115 81 chr20 51941352 51941587 -20212295 - MER102b DNA MER1_type -49 292 50 652 188 193 11 chr20 51942250 51942426 -20211456 + MER3 DNA MER1_type 2 209 0 216 0 0 0 chr20 51942924 51942948 -20210934 + (A)n Simple_repeat Simple_repeat 1 24 0 198 0 0 0 chr20 51942993 51943015 -20210867 + (CAAAAA)n Simple_repeat Simple_repeat 4 25 0 2281 88 28 0 chr20 51944192 51944475 -20209407 - AluSg SINE Alu -19 291 1 609 281 107 0 chr20 51944772 51944968 -20208914 + MIR SINE MIR 28 244 -18 307 233 23 47 chr20 51945514 51945600 -20208282 + MIR SINE MIR 23 106 -156 191 222 0 22 chr20 51945832 51945877 -20208005 + MIR3 SINE MIR 114 157 -51 384 290 52 26 chr20 51946368 51946523 -20207359 - MIR SINE MIR -44 218 60 261 296 99 31 chr20 51947338 51947500 -20206382 + L1ME LINE L1 5510 5682 -439 1113 64 0 13 chr20 51947510 51947666 -20206216 + MER41A LTR ERV1 401 554 0 526 133 22 0 chr20 51947666 51947756 -20206126 + MER41A-int LTR ERV1 1 92 -7664 * 1565 89 9 0 chr20 51947752 51947966 -20205916 + MER41B-int LTR ERV1 5729 5944 -2 3548 115 20 0 chr20 51947966 51948505 -20205377 + MER41B LTR ERV1 1 550 -85 241 288 206 22 chr20 51948514 51948698 -20205184 + L1ME LINE L1 5691 5908 -213 2218 100 13 17 chr20 51948701 51949001 -20204881 - AluSx SINE Alu -13 299 1 207 0 0 0 chr20 51949131 51949154 -20204728 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1716 130 71 0 chr20 51949160 51949413 -20204469 - AluSx SINE Alu -37 275 5 186 167 0 0 chr20 51949746 51949776 -20204106 + MIR SINE MIR 116 145 -117 231 264 81 23 chr20 51949858 51949927 -20203955 + MER5A DNA MER1_type 6 82 -107 2324 103 0 0 chr20 51949927 51950228 -20203654 + AluSx SINE Alu 1 301 -11 231 264 81 23 chr20 51950228 51950245 -20203637 + MER5A DNA MER1_type 82 97 -92 302 286 127 16 chr20 51950276 51950402 -20203480 - L1MC4a LINE L1 -1936 5872 5733 2216 91 0 17 chr20 51950541 51950837 -20203045 - AluSc SINE Alu -18 291 1 375 247 0 0 chr20 51950918 51951007 -20202875 + L1MA9 LINE L1 6167 6255 -57 2516 82 3 0 chr20 51951021 51951327 -20202555 - AluSg SINE Alu -3 307 1 23 0 0 0 chr20 51951327 51951350 -20202532 + AT_rich Low_complexity Low_complexity 1 23 0 292 190 76 13 chr20 51951392 51951471 -20202411 - MIR SINE MIR -66 196 113 1447 143 5 14 chr20 51951719 51951936 -20201946 - AluJb SINE Alu -13 299 85 338 242 30 10 chr20 51952553 51952652 -20201230 + MIR SINE MIR 19 119 -89 2298 108 0 3 chr20 51952671 51952968 -20200914 + AluSx SINE Alu 1 296 -16 222 267 0 53 chr20 51953013 51953172 -20200710 - MIR SINE MIR -14 248 29 287 276 124 28 chr20 51953942 51954087 -20199795 - MIR3 SINE MIR -6 202 44 402 287 9 0 chr20 51954685 51954800 -20199082 - MIR SINE MIR -101 161 46 229 311 98 33 chr20 51955163 51955285 -20198597 - MIR SINE MIR -61 147 18 1973 129 61 0 chr20 51956015 51956294 -20197588 + AluJb SINE Alu 1 296 -16 309 312 73 0 chr20 51956469 51956578 -20197304 - MIR SINE MIR -63 145 29 587 311 112 0 chr20 51956778 51956984 -20196898 - MIR SINE MIR -20 242 14 344 295 150 0 chr20 51957533 51957706 -20196176 + MIR SINE MIR 64 262 0 196 220 60 0 chr20 51957924 51957974 -20195908 - MIR SINE MIR -131 131 79 308 249 67 12 chr20 51958377 51958484 -20195398 + MIR SINE MIR 31 141 -67 269 296 118 46 chr20 51960351 51960503 -20193379 - MIR SINE MIR -34 228 66 383 273 66 0 chr20 51961313 51961434 -20192448 - MIR3 SINE MIR -21 187 59 189 224 122 0 chr20 51961531 51961580 -20192302 + MIR SINE MIR 87 141 -67 196 250 0 19 chr20 51961672 51961724 -20192158 - L2 LINE L2 0 3272 3222 243 293 71 0 chr20 51961871 51961970 -20191912 - MIR3 SINE MIR -9 199 94 238 320 70 8 chr20 51962650 51962778 -20191104 + MIR3 SINE MIR 66 201 -7 451 242 109 85 chr20 51963421 51963632 -20190250 + MIR SINE MIR 12 227 -35 256 254 91 64 chr20 51964260 51964370 -20189512 - MIR3 SINE MIR -49 159 47 189 45 45 45 chr20 51965008 51965052 -20188830 + (CCCCG)n Simple_repeat Simple_repeat 5 48 0 320 232 49 0 chr20 51965216 51965298 -20188584 - MIR3 SINE MIR -34 174 89 1445 128 41 88 chr20 51965383 51965637 -20188245 - MER58B DNA MER1_type -2079 341 77 1762 138 7 28 chr20 51965637 51965971 -20187911 + AluJb SINE Alu 1 328 0 1445 128 41 88 chr20 51965971 51965993 -20187889 - MER58B DNA MER1_type -2343 77 77 2233 114 10 0 chr20 51965993 51966300 -20187582 + AluSx SINE Alu 1 310 -2 1445 128 41 88 chr20 51966300 51966341 -20187541 - MER58B DNA MER1_type -2342 78 37 811 280 134 18 chr20 51966599 51966988 -20186894 + Charlie2a DNA MER1_type 272 705 -2157 795 188 188 0 chr20 51966993 51967222 -20186660 + Charlie2a DNA MER1_type 1853 2124 -738 1484 164 130 18 chr20 51967224 51967481 -20186401 + MER63B DNA MER1_type 1 304 -758 2308 100 13 3 chr20 51967481 51967781 -20186101 - AluSc SINE Alu -6 303 1 1484 164 130 18 chr20 51967781 51967853 -20186029 + MER63B DNA MER1_type 304 367 -69 1373 192 53 0 chr20 51967883 51968028 -20185854 - AluJb SINE Alu -31 281 116 390 42 0 0 chr20 51968028 51968076 -20185806 + (TTA)n Simple_repeat Simple_repeat 2 49 0 1373 192 53 0 chr20 51968076 51968175 -20185707 - AluJb SINE Alu -196 116 24 564 180 0 85 chr20 51968251 51968325 -20185557 + Charlie2a DNA MER1_type 2122 2201 -661 189 0 0 0 chr20 51968325 51968346 -20185536 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 1893 167 0 0 chr20 51968348 51968624 -20185258 - AluSx SINE Alu -32 280 5 564 180 0 85 chr20 51968624 51968746 -20185136 + Charlie2a DNA MER1_type 2202 2304 -558 2214 148 57 7 chr20 51968762 51969168 -20184714 + MSTB LTR MaLR 1 426 0 1621 190 14 14 chr20 51969174 51969187 -20184695 + Charlie2a DNA MER1_type 2432 2444 -418 304 185 0 0 chr20 51969187 51969252 -20184630 + L1MA10 LINE L1 6266 6330 -4 1621 190 14 14 chr20 51969252 51969653 -20184229 + Charlie2a DNA MER1_type 2443 2846 -16 240 269 135 77 chr20 51970742 51970898 -20182984 + MIR SINE MIR 16 180 -82 239 279 19 29 chr20 51971194 51971298 -20182584 - MIR3 SINE MIR -1 207 105 536 302 33 24 chr20 51971352 51971564 -20182318 + L2 LINE L2 3098 3311 -2 201 324 148 0 chr20 51971627 51971735 -20182147 - L2 LINE L2 -2 3270 3147 248 272 62 0 chr20 51972261 51972342 -20181540 - MIR SINE MIR -78 184 99 231 137 20 39 chr20 51972414 51972465 -20181417 + MLT1H LTR MaLR 500 549 0 294 329 99 20 chr20 51972667 51972819 -20181063 + L2 LINE L2 3148 3311 -2 1818 174 0 7 chr20 51972991 51973290 -20180592 + AluJo SINE Alu 1 297 -15 2249 121 3 3 chr20 51973290 51973596 -20180286 + AluSq SINE Alu 1 306 -7 862 184 63 44 chr20 51973610 51973816 -20180066 - MER2 DNA MER2_type -135 210 1 361 253 32 11 chr20 51974041 51974181 -20179701 + MIR SINE MIR 69 208 -54 2177 125 0 3 chr20 51974207 51974503 -20179379 - AluSx SINE Alu -17 295 1 648 278 73 5 chr20 51974544 51974749 -20179133 + MIR SINE MIR 34 252 -10 255 125 0 0 chr20 51975069 51975109 -20178773 + (GGGA)n Simple_repeat Simple_repeat 1 40 0 229 286 101 25 chr20 51975155 51975274 -20178608 - MIR SINE MIR -11 251 124 614 233 91 57 chr20 51975310 51975520 -20178362 - MIR SINE MIR -21 241 25 304 189 68 106 chr20 51975746 51975878 -20178004 - MIR3 SINE MIR -6 202 76 326 376 0 32 chr20 51975930 51976087 -20177795 - MER5A DNA MER1_type -2 187 36 277 235 71 59 chr20 51976118 51976203 -20177679 - MIR3 SINE MIR -52 156 71 186 133 0 0 chr20 51976818 51976848 -20177034 + (TCCC)n Simple_repeat Simple_repeat 4 33 0 1530 146 40 86 chr20 51976874 51977034 -20176848 + AluJo SINE Alu 1 142 -170 2291 101 3 0 chr20 51977034 51977322 -20176560 + AluSx SINE Alu 1 289 -23 1530 146 40 86 chr20 51977322 51977463 -20176419 + AluJo SINE Alu 142 288 -24 456 257 103 29 chr20 51977507 51977682 -20176200 + MIR SINE MIR 32 219 -43 2547 70 0 0 chr20 51978005 51978305 -20175577 - AluY SINE Alu -11 300 1 391 217 165 0 chr20 51978355 51978470 -20175412 - MIR3 SINE MIR -28 180 47 183 211 0 0 chr20 51978604 51978642 -20175240 - L2 LINE L2 -1 3312 3275 2381 64 3 0 chr20 51978888 51979206 -20174676 - AluSp SINE Alu 0 319 1 231 299 38 96 chr20 51979209 51979366 -20174516 + MIR3 SINE MIR 47 194 -14 320 279 38 0 chr20 51980301 51980399 -20173483 + MIR SINE MIR 49 149 -73 184 244 58 122 chr20 51980399 51980571 -20173311 + MIR3 SINE MIR 2 162 -46 293 272 114 0 chr20 51980583 51980713 -20173169 + MIR SINE MIR 9 153 -55 316 248 75 35 chr20 51980726 51980860 -20173022 + MIR3 SINE MIR 9 144 -87 297 252 9 37 chr20 51980983 51981003 -20172879 + MIR3 SINE MIR 2 21 -187 2891 13 0 0 chr20 51981003 51981311 -20172571 - AluYa5 SINE Alu -3 308 1 297 252 9 37 chr20 51981311 51981397 -20172485 + MIR3 SINE MIR 21 105 -103 605 229 62 14 chr20 51981722 51981866 -20172016 - MER58A DNA MER1_type 0 151 1 230 301 161 0 chr20 51981889 51981982 -20171900 + MIR SINE MIR 84 191 -71 378 236 150 7 chr20 51982486 51982626 -20171256 + MIR3 SINE MIR 14 173 -35 867 217 90 5 chr20 51982656 51982868 -20171014 + MIR SINE MIR 2 231 -31 651 272 38 86 chr20 51982891 51983181 -20170701 + Charlie8 DNA MER1_type 1 276 -2141 542 322 77 7 chr20 51985429 51985702 -20168180 - MARNA DNA Mariner -159 427 136 616 276 94 10 chr20 51985720 51985923 -20167959 - MIR SINE MIR 0 262 43 2047 125 3 58 chr20 51986132 51986461 -20167421 - AluJb SINE Alu -1 311 1 2055 139 0 23 chr20 51986465 51986766 -20167116 - AluSq SINE Alu -18 295 2 459 209 11 0 chr20 51987597 51987688 -20166194 + MIR SINE MIR 74 165 -97 249 33 0 0 chr20 51987693 51987723 -20166159 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 354 296 48 0 chr20 51987743 51987868 -20166014 + MIR SINE MIR 132 262 0 416 298 129 0 chr20 51987970 51988141 -20165741 - MIR SINE MIR -7 255 63 209 261 43 0 chr20 51988473 51988542 -20165340 - MIR SINE MIR -109 153 82 284 224 0 13 chr20 51990080 51990156 -20163726 + MIR SINE MIR 56 130 -132 2125 142 3 0 chr20 51990809 51991112 -20162770 - AluJo SINE Alu -8 304 1 351 157 7 13 chr20 51992565 51992637 -20161245 + FLAM_A SINE Alu 76 130 -3 807 256 24 20 chr20 51992988 51993242 -20160640 + MIR SINE MIR 2 256 -6 192 40 0 0 chr20 51993302 51993327 -20160555 + (TAAAAA)n Simple_repeat Simple_repeat 4 28 0 512 270 54 29 chr20 51993496 51993700 -20160182 + MIR SINE MIR 17 225 -37 1914 123 7 22 chr20 51994196 51994472 -20159410 + AluSx SINE Alu 1 272 -40 386 286 41 0 chr20 51995025 51995123 -20158759 - MIR SINE MIR -78 184 83 302 271 53 60 chr20 51995218 51995276 -20158606 - L2 LINE L2 0 3313 3256 2417 100 0 0 chr20 51995276 51995585 -20158297 - AluSc SINE Alu 0 309 1 302 271 53 60 chr20 51995585 51995659 -20158223 - L2 LINE L2 -57 3256 3182 1592 203 99 20 chr20 51995661 51996105 -20157777 + MER63C DNA MER1_type 1 479 -451 1044 225 24 4 chr20 51996167 51996416 -20157466 + MER63C DNA MER1_type 678 931 0 275 321 52 16 chr20 51996417 51996610 -20157272 - L2 LINE L2 -163 3150 2951 234 221 164 3 chr20 51996673 51996754 -20157128 - MER5A DNA MER1_type -3 175 90 519 262 8 8 chr20 51997290 51997412 -20156470 + L2 LINE L2 3191 3312 -1 269 266 89 32 chr20 51997439 51997597 -20156285 - L2 LINE L2 -173 3099 2933 191 239 136 34 chr20 51997681 51997769 -20156113 - MIR SINE MIR -72 136 40 3680 161 29 40 chr20 51997812 51997848 -20156034 - L1MB3 LINE L1 -15 6168 6133 2039 137 0 0 chr20 51997848 51998147 -20155735 - AluSx SINE Alu -13 299 1 3680 161 29 40 chr20 51998147 51998457 -20155425 - L1MB3 LINE L1 -50 6133 5821 2071 124 3 0 chr20 51998457 51998755 -20155127 + AluSq SINE Alu 3 301 -12 3680 161 29 40 chr20 51998755 51999135 -20154747 - L1MB3 LINE L1 -362 5821 5449 3494 200 49 40 chr20 51999192 52000202 -20153680 - L1ME1 LINE L1 -5 6161 5162 2333 84 0 0 chr20 52000202 52000501 -20153381 - AluY SINE Alu -12 299 1 3494 200 49 40 chr20 52000501 52000726 -20153156 - L1ME1 LINE L1 -1004 5162 4919 1642 154 56 0 chr20 52000726 52001011 -20152871 - AluSx SINE Alu -11 301 1 3494 200 49 40 chr20 52001011 52001054 -20152828 - L1ME1 LINE L1 -1247 4919 4878 232 232 0 0 chr20 52001048 52001104 -20152778 - L1ME1 LINE L1 -1495 4651 4596 * 716 182 84 159 chr20 52001222 52001511 -20152371 - L1MD2 LINE L1 0 6357 5984 2180 112 0 3 chr20 52001511 52001824 -20152058 - AluSx SINE Alu 0 312 1 716 182 84 159 chr20 52001824 52001892 -20151990 - L1MD2 LINE L1 -373 5984 5912 708 130 37 0 chr20 52001902 52002010 -20151872 - L1MD2 LINE L1 -422 5937 5826 2426 189 123 58 chr20 52002020 52002723 -20151159 - L1MD1 LINE L1 -39 6597 5941 2163 99 0 0 chr20 52002723 52003032 -20150850 + AluSx SINE Alu 1 309 0 2426 189 123 58 chr20 52003032 52003123 -20150759 - L1MD1 LINE L1 -695 5941 5857 1355 176 73 7 chr20 52003123 52003396 -20150486 - AluJo SINE Alu -21 291 1 2426 189 123 58 chr20 52003396 52003614 -20150268 - L1MD1 LINE L1 -779 5857 4456 2771 215 24 47 chr20 52003629 52004494 -20149388 + L1M4 LINE L1 2449 3293 -2853 2024 117 3 0 chr20 52004494 52004800 -20149082 - AluSx SINE Alu 0 307 1 516 246 0 0 chr20 52005275 52005409 -20148473 - L1MD1 LINE L1 -3249 3291 3158 733 186 6 64 chr20 52005409 52005581 -20148301 + FRAM SINE Alu 1 153 -23 4649 243 54 34 chr20 52005586 52005764 -20148118 - L1MD1 LINE L1 -3389 3151 2978 2308 78 7 0 chr20 52005764 52006059 -20147823 - AluSx SINE Alu -11 301 5 4649 243 54 34 chr20 52006059 52007044 -20146838 - L1MD1 LINE L1 -3562 2978 1968 4823 138 23 61 chr20 52007044 52007942 -20145940 + MER6 DNA MER2_type 1 864 -1 4649 243 54 34 chr20 52007942 52008445 -20145437 - L1MD1 LINE L1 -4572 1968 1476 465 174 0 23 chr20 52008446 52008532 -20145350 - AluS SINE Alu -229 84 1 267 302 74 42 chr20 52008535 52008724 -20145158 - MLT1F1-int LTR MaLR -485 886 692 1580 81 27 5 chr20 52008893 52009115 -20144767 - AluSg/x SINE Alu 0 310 84 299 260 14 0 chr20 52009212 52009285 -20144597 - MLT1F1-int LTR MaLR -770 601 528 232 193 18 18 chr20 52009296 52009353 -20144529 - MER20 DNA MER1_type 0 219 163 917 190 25 0 chr20 52009382 52009540 -20144342 - MER20 DNA MER1_type -52 167 6 564 275 0 0 chr20 52009540 52009678 -20144204 - MLT1F1-int LTR MaLR -836 535 398 1631 126 123 0 chr20 52009749 52010026 -20143856 + AluSq SINE Alu 3 313 0 322 241 194 29 chr20 52010061 52010231 -20143651 - MLT1F1-int LTR MaLR -1173 198 1 1599 249 48 32 chr20 52010291 52010728 -20143154 - MLT1F1 LTR MaLR -7 560 117 2631 172 61 181 chr20 52010748 52011995 -20141887 + MER52A LTR ERV1 659 1755 0 2120 135 0 0 chr20 52012117 52012428 -20141454 - AluSx SINE Alu -1 311 1 207 204 0 0 chr20 52012429 52012473 -20141409 + T-rich Low_complexity Low_complexity 1 44 0 2214 105 0 0 chr20 52012488 52012793 -20141089 - AluSx SINE Alu -7 305 1 1674 176 3 7 chr20 52012795 52013091 -20140791 - AluJb SINE Alu -15 297 3 1856 157 7 0 chr20 52013099 52013404 -20140478 - AluJb SINE Alu -5 307 1 1752 217 85 74 chr20 52013407 52014258 -20139624 - L1MEc LINE L1 -3219 3722 2873 1168 252 49 45 chr20 52014279 52014484 -20139398 - LTR40c LTR ERVL -63 399 196 198 0 0 0 chr20 52014484 52014506 -20139376 + (TTTTA)n Simple_repeat Simple_repeat 4 25 0 843 154 0 0 chr20 52014516 52014639 -20139243 - FLAM_C SINE Alu -10 123 1 1168 252 49 45 chr20 52014639 52014831 -20139051 - LTR40c LTR ERVL -274 188 1 565 186 0 24 chr20 52014878 52015002 -20138880 - L1MA9 LINE L1 -25 6287 6167 2001 224 176 54 chr20 52015008 52016040 -20137842 - L1MEc LINE L1 -4124 2817 1913 2683 100 14 0 chr20 52016040 52016410 -20137472 + THE1C LTR MaLR 1 375 0 10084 110 32 46 chr20 52016410 52018011 -20135871 + THE1C-int LTR MaLR 1 1580 0 2582 107 19 0 chr20 52018013 52018379 -20135503 + THE1C LTR MaLR 3 375 0 2001 224 176 54 chr20 52018379 52018630 -20135252 - L1MEc LINE L1 -5028 1913 1372 612 234 7 35 chr20 52018633 52018778 -20135104 - FLAM_C SINE Alu 0 143 3 723 187 16 89 chr20 52018778 52018847 -20135035 - L1MEc LINE L1 -5040 1383 1310 2033 146 0 0 chr20 52018847 52019149 -20134733 - AluSq SINE Alu -11 302 1 723 187 16 89 chr20 52019149 52019336 -20134546 - L1MEc LINE L1 -5113 1310 1146 675 288 26 39 chr20 52019362 52019407 -20134475 - L1MEc LINE L1 -6098 325 281 1300 204 57 50 chr20 52019407 52019706 -20134176 + AluJo SINE Alu 1 301 -1 675 288 26 39 chr20 52019706 52019966 -20133916 - L1MEc LINE L1 -6142 281 24 1981 127 7 0 chr20 52020225 52020516 -20133366 + AluSx SINE Alu 1 293 -19 896 268 126 0 chr20 52020719 52020950 -20132932 + MIR SINE MIR 1 260 -2 320 332 185 14 chr20 52021026 52021237 -20132645 - MIR SINE MIR -3 259 13 200 268 0 85 chr20 52021260 52021342 -20132540 + MIR SINE MIR 122 196 -66 185 292 79 11 chr20 52021405 52021494 -20132388 + L2 LINE L2 2935 3029 -243 316 296 112 54 chr20 52021569 52021654 -20132228 - L2 LINE L2 -601 2713 2634 2737 25 0 0 chr20 52021654 52021969 -20131913 + AluYb8 SINE Alu 1 315 -3 316 296 112 54 chr20 52021969 52022143 -20131739 - L2 LINE L2 -680 2634 2439 25 31 0 0 chr20 52022520 52022552 -20131330 + GC_rich Low_complexity Low_complexity 1 32 0 29 47 0 0 chr20 52022859 52022902 -20130980 + GC_rich Low_complexity Low_complexity 1 43 0 213 217 300 0 chr20 52024312 52024421 -20129461 - MIR SINE MIR -65 143 31 27 92 0 0 chr20 52025705 52025781 -20128101 + AT_rich Low_complexity Low_complexity 1 76 0 600 258 131 18 chr20 52025808 52026029 -20127853 - MIR SINE MIR 0 262 17 467 258 129 27 chr20 52026061 52026247 -20127635 - MIR SINE MIR -8 254 50 274 326 152 14 chr20 52026301 52026439 -20127443 + MIR3 SINE MIR 30 186 -22 195 69 0 0 chr20 52026538 52026567 -20127315 + (TCC)n Simple_repeat Simple_repeat 1 29 0 397 258 167 40 chr20 52027241 52027439 -20126443 - L2 LINE L2 -1 3312 3090 334 226 141 95 chr20 52027672 52027955 -20125927 - MLT1J LTR MaLR -11 500 205 2075 130 0 0 chr20 52027970 52028269 -20125613 - AluSx SINE Alu -13 299 1 855 295 20 26 chr20 52028397 52028699 -20125183 - L2 LINE L2 -897 2417 2118 313 210 62 25 chr20 52030217 52030298 -20123584 - L2 LINE L2 -1 3271 3188 244 270 228 26 chr20 52030680 52030869 -20123013 - MIR SINE MIR -16 246 20 2834 211 72 52 chr20 52031145 52031990 -20121892 + L1ME2 LINE L1 5293 6154 -10 403 261 79 88 chr20 52032023 52032238 -20121644 + L1MC4 LINE L1 7829 8041 -1 227 35 0 0 chr20 52032310 52032339 -20121543 + L1MC/D LINE L1 5411 5439 -803 21 36 0 0 chr20 52033533 52033561 -20120321 + AT_rich Low_complexity Low_complexity 1 28 0 557 281 45 32 chr20 52033804 52034025 -20119857 - Charlie8 DNA MER1_type -2038 379 156 947 111 0 0 chr20 52034042 52034168 -20119714 - FLAM_C SINE Alu -17 126 1 392 238 20 0 chr20 52034170 52034271 -20119611 - Charlie8 DNA MER1_type -2258 159 57 216 293 92 92 chr20 52034841 52035220 -20118662 - L2 LINE L2 -32 3240 2862 191 211 58 39 chr20 52036265 52036317 -20117565 + L2 LINE L2 3248 3300 -13 548 323 68 9 chr20 52036325 52036545 -20117337 + MIR SINE MIR 11 243 -19 264 271 96 54 chr20 52037327 52037493 -20116389 + MIR SINE MIR 32 204 -58 183 329 57 0 chr20 52037525 52037595 -20116287 - L2 LINE L2 -52 3220 3147 200 26 0 105 chr20 52038559 52038597 -20115285 + (TTTTTA)n Simple_repeat Simple_repeat 3 36 0 1390 192 58 0 chr20 52038987 52039263 -20114619 - AluJo SINE Alu -12 300 9 1581 166 0 52 chr20 52039469 52039596 -20114286 + AluJb SINE Alu 5 137 -175 2084 88 0 0 chr20 52039596 52039879 -20114003 - AluY SINE Alu -3 308 26 1581 166 0 52 chr20 52039879 52040058 -20113824 + AluJb SINE Alu 137 295 -17 666 156 52 7 chr20 52040072 52040207 -20113675 - L1MC2 LINE L1 -7 6337 6197 592 248 71 37 chr20 52040207 52040523 -20113359 - L1MC5 LINE L1 -440 7521 7261 320 303 8 59 chr20 52041211 52041330 -20112552 + L1M4 LINE L1 4550 4662 -1484 343 360 148 8 chr20 52041367 52041617 -20112265 - L2 LINE L2 -15 3257 2973 837 34 42 0 chr20 52041645 52041764 -20112118 + (TTTC)n Simple_repeat Simple_repeat 3 126 0 1467 61 0 0 chr20 52041765 52041945 -20111937 - L1PA8 LINE L1 -3 6169 5990 742 211 103 26 chr20 52042499 52042693 -20111189 - MER3 DNA MER1_type 0 209 1 467 250 48 30 chr20 52043123 52043291 -20110591 - MER5A DNA MER1_type -2 187 17 2233 70 0 14 chr20 52043585 52043870 -20110012 + AluSc SINE Alu 1 281 -28 198 0 0 0 chr20 52043870 52043892 -20109990 + (CA)n Simple_repeat Simple_repeat 2 23 0 1113 232 122 28 chr20 52044597 52044951 -20108931 + L2 LINE L2 2191 2577 -737 190 196 22 43 chr20 52044948 52044994 -20108888 + L2 LINE L2 3036 3080 -233 * 552 208 164 1 chr20 52044977 52045126 -20108756 + MER5B DNA MER1_type 8 173 -5 2082 90 11 0 chr20 52045310 52045616 -20108266 + AluSx SINE Alu 1 309 0 232 211 58 0 chr20 52046218 52046270 -20107612 + MIR3 SINE MIR 108 162 -46 339 169 0 0 chr20 52046492 52046551 -20107331 - MER33 DNA MER1_type -2 361 303 848 192 5 21 chr20 52046557 52046750 -20107132 + AluJb SINE Alu 120 309 -3 804 202 67 22 chr20 52046750 52046973 -20106909 - MER33 DNA MER1_type -85 239 7 21 0 0 0 chr20 52047141 52047162 -20106720 + AT_rich Low_complexity Low_complexity 1 21 0 1948 127 13 23 chr20 52047165 52047496 -20106386 - AluSx SINE Alu 0 312 1 231 49 0 49 chr20 52047667 52047708 -20106174 + (TTTA)n Simple_repeat Simple_repeat 2 180 0 644 200 0 0 chr20 52047708 52047813 -20106069 - FLAM_C SINE Alu -1 159 15 285 310 0 11 chr20 52047936 52048023 -20105859 + CT-rich Low_complexity Low_complexity 3 88 0 2286 125 91 0 chr20 52048555 52048920 -20104962 + MSTC LTR MaLR 21 455 -2 301 247 66 114 chr20 52049016 52049182 -20104700 + MLT1H1-int LTR MaLR 1038 1195 -176 1633 178 11 11 chr20 52049276 52049593 -20104289 - AluJb SINE Alu 0 317 1 288 0 0 0 chr20 52049597 52049629 -20104253 + (T)n Simple_repeat Simple_repeat 1 32 0 1910 223 73 25 chr20 52049725 52050075 -20103807 + MLT1H1 LTR MaLR 12 393 -162 180 0 0 0 chr20 52050075 52050095 -20103787 + (CAGCC)n Simple_repeat Simple_repeat 5 24 0 1910 223 73 25 chr20 52050095 52050225 -20103657 + MLT1H1 LTR MaLR 393 515 -40 2159 92 135 65 chr20 52050548 52050891 -20102991 + MSTA LTR MaLR 1 319 -109 2247 63 7 20 chr20 52050891 52051191 -20102691 - AluSp SINE Alu -17 296 1 2159 92 135 65 chr20 52051191 52051203 -20102679 + MSTA LTR MaLR 319 329 -99 2104 120 3 0 chr20 52051203 52051511 -20102371 - AluSp SINE Alu -2 311 3 2159 92 135 65 chr20 52051511 52051554 -20102328 + MSTA LTR MaLR 329 428 0 569 279 115 52 chr20 52051840 52052049 -20101833 - L2 LINE L2 -38 3275 3081 1144 173 20 0 chr20 52052049 52052246 -20101636 - L1PA16 LINE L1 -18 6148 5948 569 279 115 52 chr20 52052246 52052444 -20101438 - L2 LINE L2 -232 3081 2842 704 193 142 24 chr20 52052691 52052903 -20100979 - L1ME3A LINE L1 -119 6051 5815 231 319 83 14 chr20 52053138 52053282 -20100600 - MIR SINE MIR -2 260 107 2861 185 39 39 chr20 52053969 52054607 -20099275 + MER4B-int LTR ERV1 3451 4088 -2670 1241 84 95 0 chr20 52054608 52054787 -20099095 + MER4B-int LTR ERV1 4454 4649 -2109 * 5973 95 43 6 chr20 52054776 52055151 -20098731 + MER4B-int LTR ERV1 5421 5780 -978 2279 84 3 0 chr20 52055151 52055447 -20098435 - AluSq SINE Alu -12 301 5 5973 95 43 6 chr20 52055447 52055926 -20097956 + MER4B-int LTR ERV1 5780 6307 -451 492 18 0 0 chr20 52055926 52055983 -20097899 + (TA)n Simple_repeat Simple_repeat 1 57 0 2351 121 33 56 chr20 52055986 52056213 -20097669 + MER4B-int LTR ERV1 6372 6588 -170 2287 89 0 3 chr20 52056213 52056516 -20097366 - AluSq SINE Alu -11 302 1 2351 121 33 56 chr20 52056516 52056684 -20097198 + MER4B-int LTR ERV1 6588 6758 0 1195 108 128 100 chr20 52056684 52056935 -20096947 + MER4B LTR ERV1 1 258 -352 * 1382 116 93 27 chr20 52056920 52057145 -20096737 + MER4E LTR ERV1 527 766 0 205 232 125 0 chr20 52057150 52057206 -20096676 + MER5A DNA MER1_type 50 112 -77 5436 129 36 26 chr20 52057252 52058146 -20095736 - MER4D LTR ERV1 0 903 1 802 219 27 27 chr20 52058149 52058336 -20095546 + MER21B LTR ERV1 491 677 -186 3218 110 138 16 chr20 52058339 52058883 -20094999 + MER4B LTR ERV1 1 610 0 238 164 91 0 chr20 52058896 52058951 -20094931 + MER21B LTR ERV1 697 756 -107 4695 110 2 0 chr20 52058967 52059601 -20094281 - MER41B LTR ERV1 0 635 1 2091 124 0 3 chr20 52059736 52060035 -20093847 + AluSx SINE Alu 1 298 -14 420 177 127 0 chr20 52060094 52060173 -20093709 + MIR SINE MIR 59 147 -115 3365 157 44 68 chr20 52061103 52061811 -20092071 - LTR8 LTR ERV1 0 691 1 1157 238 140 19 chr20 52062146 52062762 -20091120 - L2 LINE L2 0 3313 2603 612 194 75 6 chr20 52063281 52063441 -20090441 + MER96B DNA MER1_type? 9 179 -238 2008 112 28 0 chr20 52063773 52064059 -20089823 - AluSx SINE Alu -18 294 1 203 259 12 74 chr20 52064500 52064581 -20089301 - MIR3 SINE MIR -15 193 118 479 254 8 34 chr20 52064965 52065083 -20088799 + L2 LINE L2 3158 3272 0 254 203 54 14 chr20 52065387 52065461 -20088421 + LTR67 LTR ERVL 473 549 -8 195 42 0 0 chr20 52065626 52065650 -20088232 + (T)n Simple_repeat Simple_repeat 1 24 0 189 121 0 0 chr20 52065766 52065799 -20088083 + (TG)n Simple_repeat Simple_repeat 2 34 0 650 245 80 16 chr20 52065838 52066006 -20087876 - MIR SINE MIR 0 262 79 1396 170 62 104 chr20 52066006 52066411 -20087471 - MLT1B LTR MaLR -2 388 1 650 245 80 16 chr20 52066411 52066430 -20087452 - MIR SINE MIR -183 79 63 358 275 156 64 chr20 52066600 52066927 -20086955 - LTR16C LTR ERVL -134 357 1 209 235 268 85 chr20 52066932 52067085 -20086797 + MIR SINE MIR 82 262 0 468 270 22 22 chr20 52067129 52067292 -20086590 - MIR3 SINE MIR -10 198 36 329 235 25 64 chr20 52067293 52067441 -20086441 - L1MC4 LINE L1 -1339 6983 1948 302 260 0 39 chr20 52067463 52067540 -20086342 - L1MC4 LINE L1 -4358 2068 1995 1840 149 0 0 chr20 52067667 52067955 -20085927 - AluJo SINE Alu -24 288 1 274 177 123 113 chr20 52068017 52068068 -20085814 - Charlie7 DNA MER1_type 0 2612 2563 219 36 0 0 chr20 52068068 52068096 -20085786 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 1917 104 32 4 chr20 52068098 52068377 -20085505 - AluSx SINE Alu -25 287 1 274 177 123 113 chr20 52068377 52068525 -20085357 - Charlie7 DNA MER1_type -49 2563 2408 271 422 0 8 chr20 52068607 52068735 -20085147 - L2 LINE L2 -177 3095 2969 217 297 56 112 chr20 52069211 52069333 -20084549 - L3 LINE CR1 -103 1474 1372 1831 152 37 0 chr20 52069333 52069629 -20084253 + AluJb SINE Alu 1 307 -5 217 297 56 112 chr20 52069629 52069755 -20084127 - L3 LINE CR1 -205 1372 1240 246 311 44 0 chr20 52070290 52070376 -20083506 - MIR3 SINE MIR -15 193 104 349 302 59 5 chr20 52070376 52070522 -20083360 + MIR SINE MIR 2 159 -62 2408 185 38 55 chr20 52070522 52071106 -20082776 - MER90 LTR ERV1 0 575 2 1827 157 0 20 chr20 52071106 52071478 -20082404 - AluSx SINE Alu 0 378 13 214 337 21 11 chr20 52071502 52071597 -20082285 + MIR SINE MIR 161 256 -6 205 146 0 42 chr20 52071599 52071647 -20082235 + (TAA)n Simple_repeat Simple_repeat 3 48 0 2249 45 0 0 chr20 52071682 52071979 -20081903 - AluY SINE Alu 0 309 13 388 172 31 0 chr20 52072049 52072113 -20081769 + MIR SINE MIR 82 147 -61 790 151 0 0 chr20 52072117 52072236 -20081646 + AluSq/x SINE Alu 1 119 -194 704 198 101 68 chr20 52072304 52072536 -20081346 + MIR SINE MIR 14 246 -16 671 262 230 26 chr20 52072547 52072718 -20081164 - L2 LINE L2 -23 3290 3155 978 141 0 0 chr20 52072718 52072867 -20081015 + L1PA6 LINE L1 6006 6154 0 671 262 230 26 chr20 52072867 52073004 -20080878 - L2 LINE L2 -158 3155 2919 342 301 34 27 chr20 52073028 52073174 -20080708 - L2 LINE L2 -499 2815 2669 222 37 0 0 chr20 52073729 52073756 -20080126 + (TTTTC)n Simple_repeat Simple_repeat 3 29 0 1512 139 31 12 chr20 52073776 52074034 -20079848 - AluJo SINE Alu -5 307 45 492 268 68 45 chr20 52074036 52074256 -20079626 - HAL1 LINE L1 -138 2369 2145 313 301 187 18 chr20 52074400 52074545 -20079337 + MIR SINE MIR 6 125 -137 2114 125 0 7 chr20 52074545 52074848 -20079034 + AluSx SINE Alu 1 301 -11 313 301 187 18 chr20 52074848 52074921 -20078961 + MIR SINE MIR 125 261 -1 195 239 70 28 chr20 52075021 52075092 -20078790 - MIR SINE MIR -116 146 73 906 184 0 0 chr20 52075097 52075255 -20078627 + AluSg/x SINE Alu 140 297 -15 616 297 81 23 chr20 52075486 52075745 -20078137 + L1MEd LINE L1 487 760 -5359 438 137 0 14 chr20 52076401 52076474 -20077408 - AluJ/FLAM SINE Alu -238 74 3 1758 159 12 25 chr20 52076478 52076805 -20077077 + LOR1-int LTR ERV1 1043 1365 -421 * 1790 127 67 6 chr20 52076793 52077124 -20076758 + LOR1-int LTR ERV1 1263 1613 -6507 712 165 6 68 chr20 52077113 52077289 -20076593 + LOR1-int LTR ERV1 3519 3683 -2915 * 503 127 0 0 chr20 52077294 52077373 -20076509 + LOR1-int LTR ERV1 1618 1696 -6424 375 210 80 20 chr20 52077381 52077481 -20076401 - MER50 LTR ERV1 -130 604 499 22 0 0 0 chr20 52077482 52077504 -20076378 + AT_rich Low_complexity Low_complexity 1 22 0 1232 145 0 0 chr20 52077540 52077726 -20076156 - AluSg/x SINE Alu -35 277 92 182 292 0 21 chr20 52077909 52077957 -20075925 - L2 LINE L2 -93 3179 3133 239 77 77 26 chr20 52078143 52078182 -20075700 + MER72 LTR ERV1 640 680 -42 2145 165 47 76 chr20 52078242 52078422 -20075460 + MLT1C LTR MaLR 3 187 -263 3052 120 8 8 chr20 52078422 52078896 -20074986 - L1PB1 LINE L1 0 6151 5678 2145 165 47 76 chr20 52078896 52079192 -20074690 + MLT1C LTR MaLR 187 441 -9 463 271 31 31 chr20 52079235 52079364 -20074518 - MIR SINE MIR -57 151 23 3039 210 15 22 chr20 52079555 52080105 -20073777 - MLT1G LTR MaLR 0 590 43 1663 141 51 90 chr20 52080105 52080495 -20073387 + THE1C LTR MaLR 1 375 0 3039 210 15 22 chr20 52080495 52080538 -20073344 - MLT1G LTR MaLR -547 43 1 2437 212 18 36 chr20 52080695 52081246 -20072636 - MER87 LTR ERV1 0 541 1 788 315 61 34 chr20 52081372 52081795 -20072087 + L2 LINE L2 2590 3021 -292 359 150 0 0 chr20 52082261 52082321 -20071561 - LTR67 LTR ERVL -17 540 481 234 273 0 0 chr20 52082365 52082420 -20071462 + LTR67 LTR ERVL 503 557 0 410 271 47 0 chr20 52083123 52083230 -20070652 + MIR SINE MIR 65 176 -86 1041 140 43 6 chr20 52083427 52083591 -20070291 + MER5A DNA MER1_type 4 173 -16 1642 79 19 0 chr20 52083591 52083806 -20070076 + AluSq SINE Alu 1 219 -94 300 91 0 0 chr20 52083807 52083851 -20070031 + (GGGGA)n Simple_repeat Simple_repeat 5 48 0 247 140 0 0 chr20 52083852 52083902 -20069980 + Alu SINE Alu 251 300 0 204 243 0 0 chr20 52083904 52083941 -20069941 + MER5A DNA MER1_type 152 188 -1 596 197 40 26 chr20 52083941 52084093 -20069789 - Charlie8 DNA MER1_type -2213 204 51 213 344 47 16 chr20 52084156 52084284 -20069598 - MIR SINE MIR -62 200 69 200 328 16 0 chr20 52085411 52085475 -20068407 + L2 LINE L2 3207 3271 -1 241 264 36 45 chr20 52087533 52087643 -20066239 - MIR3 SINE MIR -19 189 81 656 235 84 34 chr20 52088326 52088505 -20065377 + MIR SINE MIR 26 213 -49 32690 113 16 66 chr20 52088660 52095155 -20058727 - L1PA13 LINE L1 0 6163 12 1735 92 89 11 chr20 52095172 52095443 -20058439 - AluSx SINE Alu -18 294 3 630 118 43 4 chr20 52095492 52095597 -20058285 + L1MC/D LINE L1 5663 5768 -402 953 216 60 36 chr20 52095837 52096087 -20057795 + MIR SINE MIR 6 261 -1 185 323 158 0 chr20 52096156 52096283 -20057599 - MIR SINE MIR -82 180 34 214 315 23 39 chr20 52096732 52096862 -20057020 - L2 LINE L2 -213 3059 2932 2012 100 12 47 chr20 52096864 52097183 -20056699 + AluSp SINE Alu 1 308 -5 271 328 156 8 chr20 52097410 52097538 -20056344 + MIR SINE MIR 26 172 -90 189 307 20 50 chr20 52097578 52097679 -20056203 - L2 LINE L2 -2868 446 349 227 314 39 20 chr20 52098199 52098301 -20055581 - MIR SINE MIR -78 184 81 419 273 19 19 chr20 52098718 52098879 -20055003 + CT-rich Low_complexity Low_complexity 1 161 0 845 110 31 8 chr20 52098936 52099063 -20054819 + MER50 LTR ERV1 1 130 -604 2090 117 3 0 chr20 52099063 52099345 -20054537 + AluSx SINE Alu 1 283 -29 21996 124 48 59 chr20 52099359 52103653 -20050229 - MER41-int LTR ERV1 -1699 5719 272 250 175 0 35 chr20 52103654 52103764 -20050118 - Alu SINE Alu 0 354 247 346 106 76 0 chr20 52103765 52103831 -20050051 - MER41-int LTR ERV1 -4680 1266 1203 284 287 6 58 chr20 52103858 52104032 -20049850 + C-rich Low_complexity Low_complexity 5 169 0 * 298 304 14 14 chr20 52103910 52104048 -20049834 + (CCG)n Simple_repeat Simple_repeat 1 138 0 216 308 39 0 chr20 52104300 52104404 -20049478 - L2 LINE L2 -20 3252 3145 2319 49 39 3 chr20 52104492 52104777 -20049105 - AluY SINE Alu -16 295 1 261 0 0 0 chr20 52104783 52104812 -20049070 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 2336 65 11 0 chr20 52104812 52105089 -20048793 - AluSx SINE Alu -32 280 1 1806 138 14 7 chr20 52105089 52105365 -20048517 - MER41B-int LTR ERV1 -5668 278 1 4098 134 9 11 chr20 52105365 52106001 -20047881 - MER41B LTR ERV1 0 635 1 293 270 167 35 chr20 52106576 52106750 -20047132 - MER117 DNA MER1_type 0 197 1 1030 188 0 6 chr20 52107154 52107335 -20046547 + FRAM SINE Alu 1 176 0 989 304 78 13 chr20 52108856 52108933 -20044949 - L2 LINE L2 0 3313 3242 297 0 0 0 chr20 52108933 52108966 -20044916 + (TG)n Simple_repeat Simple_repeat 1 33 0 989 304 78 13 chr20 52108966 52109549 -20044333 - L2 LINE L2 -71 3242 2597 2359 83 0 3 chr20 52109567 52109868 -20044014 + AluSg SINE Alu 1 300 -10 389 226 32 97 chr20 52110022 52110146 -20043736 - MLT1H LTR MaLR -13 536 421 1677 113 0 13 chr20 52110178 52110408 -20043474 + AluSq SINE Alu 58 284 -29 2478 88 0 0 chr20 52110408 52110714 -20043168 + AluSg SINE Alu 1 306 -4 482 224 118 31 chr20 52110798 52110959 -20042923 - MLT1H LTR MaLR -374 175 1 674 256 54 31 chr20 52110985 52111208 -20042674 - ERVL LTR ERVL -969 4795 4568 418 254 81 111 chr20 52111209 52111606 -20042276 + L2 LINE L2 2929 3313 0 1157 272 38 55 chr20 52111613 52112084 -20041798 - ERVL LTR ERVL -1231 4533 4071 295 245 18 87 chr20 52112903 52113137 -20040745 - LTR38B LTR ERV1 0 610 388 233 279 0 29 chr20 52113210 52113278 -20040604 - LTR38 LTR ERV1 -362 194 129 492 202 0 53 chr20 52113391 52113505 -20040377 - LTR38B LTR ERV1 -501 109 2 206 0 69 0 chr20 52113958 52113987 -20039895 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2359 85 10 0 chr20 52114104 52114410 -20039472 - AluSx SINE Alu -2 310 2 1923 144 48 0 chr20 52114885 52115177 -20038705 + AluJb SINE Alu 1 306 -6 1123 171 56 49 chr20 52115523 52115559 -20038323 - L1MC4 LINE L1 -1 8041 8007 1844 174 3 7 chr20 52115559 52115864 -20038018 + AluJo SINE Alu 1 304 -8 1123 171 56 49 chr20 52115864 52115971 -20037911 - L1MC4 LINE L1 -35 8007 7902 189 107 0 0 chr20 52115971 52115999 -20037883 + (CA)n Simple_repeat Simple_repeat 2 29 0 1123 171 56 49 chr20 52115999 52116159 -20037723 - L1MC4 LINE L1 -140 7902 7735 3219 240 49 65 chr20 52116160 52117122 -20036760 - MER45C DNA AcHobo 0 953 8 2312 175 76 94 chr20 52117123 52117718 -20036164 - L1MC4 LINE L1 -300 7742 7159 794 170 14 0 chr20 52117723 52117864 -20036018 - FLAM_C SINE Alu 0 143 1 209 189 0 0 chr20 52118115 52118152 -20035730 + CT-rich Low_complexity Low_complexity 2 38 0 189 291 87 48 chr20 52118266 52118369 -20035513 - L2 LINE L2 -10 3303 3197 727 319 20 4 chr20 52118493 52118744 -20035138 + MIR SINE MIR 6 260 -2 337 286 107 36 chr20 52118758 52119038 -20034844 + L1ME4a LINE L1 5579 5878 -243 1876 145 28 7 chr20 52119709 52119998 -20033884 - AluSx SINE Alu -17 295 1 921 234 184 45 chr20 52120052 52120218 -20033664 + MLT1E LTR MaLR 2 144 -449 1258 126 10 5 chr20 52120218 52120424 -20033458 + L1MA4 LINE L1 6093 6299 -1 2239 105 0 14 chr20 52120426 52120721 -20033161 + AluSx SINE Alu 1 291 -21 921 234 184 45 chr20 52120721 52120969 -20032913 + MLT1E LTR MaLR 144 477 -116 349 232 37 0 chr20 52121234 52121316 -20032566 + L1ME4a LINE L1 5797 5881 -240 207 100 0 0 chr20 52121368 52121398 -20032484 + (TC)n Simple_repeat Simple_repeat 2 31 0 391 185 17 52 chr20 52121398 52121571 -20032311 + (TA)n Simple_repeat Simple_repeat 1 167 0 2531 70 3 0 chr20 52122624 52122925 -20030957 - AluSp SINE Alu -11 302 1 2983 149 70 6 chr20 52123359 52123876 -20030006 - MER44D DNA MER2_type 0 605 1 522 271 95 33 chr20 52123882 52124092 -20029790 - L2 LINE L2 -527 2787 2565 241 212 53 76 chr20 52124570 52124702 -20029180 + LTR31 LTR ERV1 482 610 -9 1875 174 10 3 chr20 52125141 52125153 -20028729 - AluSq SINE Alu 0 313 303 608 13 26 0 chr20 52125153 52125229 -20028653 + (TTCCC)n Simple_repeat Simple_repeat 3 80 0 1875 174 10 3 chr20 52125229 52125527 -20028355 - AluSq SINE Alu -10 303 1 289 237 13 13 chr20 52125907 52125983 -20027899 + MER57-int LTR ERV1 6582 6657 -880 440 273 36 59 chr20 52126213 52126466 -20027416 + MER57-int LTR ERV1 7873 8119 -1 335 313 15 8 chr20 52127578 52127709 -20026173 + MIR SINE MIR 3 134 -128 293 246 8 12 chr20 52127711 52127843 -20026039 - MER5A DNA MER1_type 0 189 9 2228 91 0 42 chr20 52128372 52128681 -20025201 - AluSc SINE Alu -13 296 1 198 0 0 0 chr20 52128687 52128709 -20025173 + (T)n Simple_repeat Simple_repeat 1 22 0 213 39 0 0 chr20 52129102 52129128 -20024754 + (CA)n Simple_repeat Simple_repeat 1 26 0 436 314 26 0 chr20 52129618 52129771 -20024111 + MIR3 SINE MIR 50 206 -2 291 273 45 85 chr20 52129835 52130011 -20023871 + MIR SINE MIR 20 188 -74 225 323 94 0 chr20 52130092 52130188 -20023694 + L2 LINE L2 3199 3303 -10 266 306 41 10 chr20 52130325 52130423 -20023459 - MIR SINE MIR -131 131 31 439 240 4 128 chr20 52130838 52131088 -20022794 - MIR SINE MIR -32 230 12 451 185 217 57 chr20 52131112 52131269 -20022613 - MER5A DNA MER1_type -6 183 2 249 305 13 65 chr20 52131333 52131487 -20022395 + HAL1b LINE L1 1186 1331 -17 434 261 111 20 chr20 52131744 52131943 -20021939 + L2 LINE L2 3093 3309 -4 236 333 124 15 chr20 52132409 52132610 -20021272 - MIR SINE MIR -12 250 28 252 297 0 0 chr20 52132617 52132681 -20021201 - L2 LINE L2 0 3272 3209 2580 123 43 20 chr20 52133026 52133051 -20020831 - L1MA8 LINE L1 -108 6183 6160 319 64 0 103 chr20 52133051 52133084 -20020798 - L1MA7 LINE L1 -1 6290 6268 2276 148 8 0 chr20 52133084 52133443 -20020439 + MER47A DNA MER2_type 2 363 -3 319 64 0 103 chr20 52133443 52133487 -20020395 - L1MA7 LINE L1 -23 6268 6221 2580 123 43 20 chr20 52133487 52133901 -20019981 - L1MA8 LINE L1 -131 6160 5734 342 257 9 53 chr20 52133917 52134030 -20019852 + MIR SINE MIR 86 193 -69 758 184 172 0 chr20 52134653 52134827 -20019055 + MER20 DNA MER1_type 16 219 0 26 0 0 0 chr20 52134851 52134877 -20019005 + AT_rich Low_complexity Low_complexity 1 26 0 543 196 138 29 chr20 52135254 52135392 -20018490 - L1PB4 LINE L1 0 6156 6004 2277 96 0 26 chr20 52135405 52135718 -20018164 - AluSx SINE Alu -7 305 1 279 215 54 43 chr20 52135915 52136008 -20017874 - L1MEc LINE L1 -4401 1995 1902 231 204 0 0 chr20 52136032 52136086 -20017796 + (CA)n Simple_repeat Simple_repeat 1 54 0 465 214 139 29 chr20 52136086 52136259 -20017623 - L1MEc LINE L1 -4577 1819 1628 385 160 40 112 chr20 52136257 52136382 -20017500 - L1MD1 LINE L1 0 6242 6127 * 1990 217 6 82 chr20 52136384 52136910 -20016972 - MLT2B1 LTR ERVL -34 486 1 6695 143 21 13 chr20 52136910 52138250 -20015632 - ERVL-B1 LTR ERVL -7 5757 4353 248 143 18 36 chr20 52138316 52138372 -20015510 + MER5B DNA MER1_type 117 171 -7 841 320 4 14 chr20 52138400 52138675 -20015207 + ERVL LTR ERVL 4832 5103 -661 1762 167 131 81 chr20 52138699 52138723 -20015159 - MLT2B1 LTR ERVL -56 464 443 423 0 0 0 chr20 52138723 52138770 -20015112 + (TG)n Simple_repeat Simple_repeat 2 48 0 1762 167 131 81 chr20 52138770 52139187 -20014695 - MLT2B1 LTR ERVL -77 443 1 642 337 38 0 chr20 52139189 52139453 -20014429 + ERVL LTR ERVL 5111 5384 -380 604 310 125 16 chr20 52139658 52139977 -20013905 + LTR33 LTR ERVL 6 359 -162 270 242 194 48 chr20 52139996 52140161 -20013721 - L2 LINE L2 -1 3312 3124 187 241 37 0 chr20 52140748 52140802 -20013080 - MER5A DNA MER1_type 0 189 134 234 154 0 0 chr20 52141757 52141796 -20012086 + LTR33A LTR ERVL 439 477 -46 332 250 46 72 chr20 52141983 52142135 -20011747 + MIR3 SINE MIR 45 192 -16 275 309 17 88 chr20 52142621 52142802 -20011080 - MIR3 SINE MIR -21 187 20 2338 100 0 3 chr20 52143269 52143568 -20010314 + AluSg SINE Alu 1 298 -12 1866 173 5 16 chr20 52143612 52143983 -20009899 - L1MA9 LINE L1 0 6312 5946 663 140 27 198 chr20 52143983 52144205 -20009677 + L1MA8 LINE L1 6107 6290 -1 2646 176 30 84 chr20 52144205 52144372 -20009510 - L1MA9 LINE L1 -372 5940 5765 1889 147 0 11 chr20 52144372 52144702 -20009180 - AluJo SINE Alu 0 327 1 2646 176 30 84 chr20 52144702 52144739 -20009143 - L1MA9 LINE L1 -547 5765 5728 2297 35 0 24 chr20 52144739 52145026 -20008856 - L1PA4 LINE L1 0 6155 5876 2646 176 30 84 chr20 52145026 52145785 -20008097 - L1MA9 LINE L1 -584 5728 5031 1995 125 29 56 chr20 52145798 52146175 -20007707 - L1MA9 LINE L1 -5 6307 5941 207 0 0 0 chr20 52146177 52146200 -20007682 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 607 191 0 17 chr20 52146200 52146315 -20007567 - FLAM_C SINE Alu -29 114 2 972 125 3 248 chr20 52146318 52146685 -20007197 - L1MA9 LINE L1 -342 5949 5673 3826 186 47 10 chr20 52146688 52147475 -20006407 - L1MA9 LINE L1 -1101 5045 4230 1957 131 44 3 chr20 52147750 52148047 -20005835 - AluSq SINE Alu -4 309 1 1156 268 95 46 chr20 52148057 52148561 -20005321 - MLT1H1 LTR MaLR -3 552 24 203 247 14 55 chr20 52148597 52148670 -20005212 + CT-rich Low_complexity Low_complexity 4 73 0 3209 248 38 45 chr20 52148767 52149338 -20004544 + MER69B DNA AcHobo 1 575 -1951 2183 123 0 3 chr20 52149338 52149631 -20004251 - AluSx SINE Alu -20 292 1 3209 248 38 45 chr20 52149631 52150152 -20003730 + MER69B DNA AcHobo 575 1158 -1368 2335 95 23 0 chr20 52150152 52150458 -20003424 - AluSp SINE Alu 0 313 1 3209 248 38 45 chr20 52150458 52150522 -20003360 + MER69B DNA AcHobo 1158 1221 -5 559 268 0 36 chr20 52151187 52151325 -20002557 - MER94 DNA DNA 0 134 2 318 296 16 48 chr20 52151987 52152112 -20001770 + MIR SINE MIR 63 183 -79 538 238 170 0 chr20 52152978 52153125 -20000757 - MIR SINE MIR -44 218 47 535 187 24 32 chr20 52153582 52153705 -20000177 - LTR24 LTR ERV1 0 467 316 315 320 125 15 chr20 52153705 52153905 -19999977 + L2 LINE L2 2843 3064 -208 182 61 30 30 chr20 52153940 52153973 -19999909 + L2 LINE L2 3281 3313 0 323 318 20 34 chr20 52154208 52154356 -19999526 - MIR3 SINE MIR -27 181 36 199 146 73 73 chr20 52155013 52155068 -19998814 + MIR SINE MIR 82 136 -72 710 256 11 11 chr20 52155195 52155371 -19998511 - MIR SINE MIR -75 187 12 208 204 43 43 chr20 52156372 52156465 -19997417 + (TCTCTG)n Simple_repeat Simple_repeat 3 95 0 238 0 0 0 chr20 52156829 52156856 -19997026 - L1M4 LINE L1 -358 5826 5800 341 356 73 31 chr20 52156858 52157049 -19996833 + LTR16C LTR ERVL 55 253 -238 6436 77 48 1 chr20 52157071 52157941 -19995941 + L1PA10 LINE L1 5254 6164 -4 627 252 78 19 chr20 52157968 52158174 -19995708 + LTR16C LTR ERVL 274 491 0 2428 156 0 11 chr20 52159575 52159990 -19993892 + MLT1C LTR MaLR 59 467 0 291 291 136 40 chr20 52160082 52160436 -19993446 + L2 LINE L2 2561 2948 -366 210 286 36 71 chr20 52160574 52160714 -19993168 + L2 LINE L2 3137 3271 -1 185 125 0 31 chr20 52160734 52160766 -19993116 - L2 LINE L2 -12 3301 3271 429 332 81 22 chr20 52160834 52161057 -19992825 - MIR SINE MIR -3 259 24 211 319 32 77 chr20 52161335 52161583 -19992299 + L2 LINE L2 2828 3064 -208 216 121 0 0 chr20 52161615 52161648 -19992234 + L2 LINE L2 3280 3312 -1 184 229 37 138 chr20 52161961 52162070 -19991812 - MIR SINE MIR -79 129 32 1103 163 84 0 chr20 52162543 52162745 -19991137 - MER20 DNA MER1_type 0 219 1 258 332 221 0 chr20 52162811 52163001 -19990881 + MIR SINE MIR 3 234 -28 947 249 59 0 chr20 52163002 52163223 -19990659 - MIR SINE MIR -1 261 28 185 205 217 24 chr20 52164594 52164677 -19989205 - MIR3 SINE MIR -15 193 95 1836 172 13 0 chr20 52165087 52165494 -19988388 - AluSx SINE Alu 0 411 1 448 279 22 7 chr20 52165592 52165728 -19988154 - MIR3 SINE MIR -14 194 57 603 93 0 0 chr20 52165906 52165981 -19987901 - Alu SINE Alu -13 298 224 367 335 11 11 chr20 52166606 52166782 -19987100 + (TGGG)n Simple_repeat Simple_repeat 3 178 0 495 284 106 63 chr20 52167264 52167885 -19985997 + L1M4 LINE L1 3330 4002 -2144 2178 104 47 3 chr20 52167885 52168184 -19985698 + AluSq SINE Alu 1 312 -1 495 284 106 63 chr20 52168184 52168441 -19985441 + L1M4 LINE L1 4002 4246 -1900 318 316 47 53 chr20 52168970 52169141 -19984741 - MIR3 SINE MIR -3 205 36 197 125 0 0 chr20 52170056 52170088 -19983794 + MIR SINE MIR 122 153 -109 1474 294 59 23 chr20 52170108 52170541 -19983341 - L2 LINE L2 -515 2799 2338 1097 159 61 156 chr20 52170541 52170867 -19983015 - AluJb SINE Alu -7 295 1 1474 294 59 23 chr20 52170867 52171007 -19982875 - L2 LINE L2 -976 2338 2205 345 304 45 0 chr20 52171328 52171440 -19982442 + MIR SINE MIR 50 166 -96 310 333 129 15 chr20 52171531 52171732 -19982150 - MIR SINE MIR -12 250 27 651 338 22 0 chr20 52171973 52172195 -19981687 - MIR SINE MIR -35 227 1 232 194 28 111 chr20 52172538 52172610 -19981272 + MIR SINE MIR 42 107 -101 9753 99 6 30 chr20 52172719 52173952 -19979930 + HSMAR1 DNA Mariner 1 1202 -85 2172 109 0 0 chr20 52173952 52174272 -19979610 - AluSx SINE Alu 0 320 1 9753 99 6 30 chr20 52174272 52174356 -19979526 + HSMAR1 DNA Mariner 1202 1287 0 1733 242 12 19 chr20 52174390 52174925 -19978957 + MER90 LTR ERV1 6 614 0 216 135 0 0 chr20 52174937 52174974 -19978908 + (TGAA)n Simple_repeat Simple_repeat 1 37 0 444 315 55 16 chr20 52176018 52176226 -19977656 + MIR SINE MIR 15 231 -31 198 0 0 0 chr20 52176244 52176266 -19977616 + (TTTTTA)n Simple_repeat Simple_repeat 2 23 0 814 171 0 0 chr20 52176295 52176412 -19977470 - 5S rRNA rRNA 0 121 5 1626 216 104 56 chr20 52176459 52176977 -19976905 + MLT1E3 LTR MaLR 1 543 -81 249 320 143 20 chr20 52177095 52177242 -19976640 - MIR3 SINE MIR 0 208 44 205 284 109 87 chr20 52177360 52177543 -19976339 - MER5A DNA MER1_type -2 187 1 249 330 87 47 chr20 52177728 52178244 -19975638 + L2 LINE L2 2121 2657 -657 330 26 0 0 chr20 52178276 52178315 -19975567 + (TG)n Simple_repeat Simple_repeat 2 40 0 286 322 58 8 chr20 52178803 52178924 -19974958 - MIR3 SINE MIR -7 201 75 291 190 8 41 chr20 52179803 52179897 -19973985 + MIR SINE MIR 107 195 -67 539 306 89 0 chr20 52179924 52180104 -19973778 + MIR SINE MIR 13 208 -54 770 118 16 0 chr20 52180484 52180611 -19973271 - MER53 DNA DNA -58 131 3 720 138 0 0 chr20 52180833 52180927 -19972955 + AluJ/FLAM SINE Alu 3 96 -216 2442 63 0 13 chr20 52180929 52181231 -19972651 + AluY SINE Alu 1 298 -13 834 219 0 0 chr20 52181232 52181378 -19972504 + AluJb SINE Alu 134 279 -33 749 139 7 34 chr20 52181379 52181674 -19972208 + GA-rich Low_complexity Low_complexity 1 287 0 358 310 0 84 chr20 52181698 52181853 -19972029 + MIR3 SINE MIR 19 160 -48 627 293 101 38 chr20 52181861 52182148 -19971734 + Charlie2b DNA MER1_type 9 313 -2469 426 238 29 0 chr20 52182144 52182249 -19971633 + Charlie2b DNA MER1_type 555 662 -2120 * 1053 187 102 142 chr20 52182319 52182869 -19971013 + Charlie2a DNA MER1_type 1467 1994 -868 21 0 0 0 chr20 52182873 52182894 -19970988 + AT_rich Low_complexity Low_complexity 1 21 0 2277 119 0 3 chr20 52182919 52183229 -19970653 + AluSx SINE Alu 1 309 -3 1299 212 79 36 chr20 52183342 52183672 -19970210 + MER2 DNA MER2_type 1 344 0 983 181 0 11 chr20 52184362 52184539 -19969343 - FRAM SINE Alu -9 167 1 254 233 116 0 chr20 52185778 52185864 -19968018 + Charlie2a DNA MER1_type 1981 2076 -786 287 246 40 58 chr20 52185882 52186106 -19967776 + Charlie2a DNA MER1_type 2243 2462 -400 1215 127 0 0 chr20 52186114 52186295 -19967587 - L1P LINE L1 -1080 5066 4886 3443 82 7 4 chr20 52186295 52186745 -19967137 + L1PA13 LINE L1 5713 6163 0 823 208 54 17 chr20 52186750 52186991 -19966891 + Charlie2a DNA MER1_type 2470 2719 -143 1736 209 50 31 chr20 52186997 52187418 -19966464 - L1ME1 LINE L1 -298 5868 5440 5904 140 24 46 chr20 52187887 52188658 -19965224 - L1MA7 LINE L1 -1 6290 5503 2511 60 10 0 chr20 52188658 52188960 -19964922 + AluY SINE Alu 1 305 -6 5904 140 24 46 chr20 52188960 52189126 -19964756 - L1MA7 LINE L1 -788 5503 5335 246 105 0 0 chr20 52189126 52189164 -19964718 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 2068 116 0 0 chr20 52189171 52189446 -19964436 - AluSx SINE Alu -37 275 1 5904 140 24 46 chr20 52189446 52189845 -19964037 - L1MA7 LINE L1 -962 5329 4980 2694 105 41 5 chr20 52189845 52190234 -19963648 - L1PB3 LINE L1 -1 6153 5751 5904 140 24 46 chr20 52190234 52190617 -19963265 - L1MA7 LINE L1 -1311 4980 4590 6624 153 20 26 chr20 52190621 52191052 -19962830 + L1 LINE L1 3359 3791 -2355 1940 159 0 10 chr20 52191052 52191354 -19962528 + AluSx SINE Alu 1 299 -13 6624 153 20 26 chr20 52191354 52192142 -19961740 + L1 LINE L1 3791 4571 -1575 455 282 58 50 chr20 52192681 52192939 -19960943 - L1M4 LINE L1 -3521 2625 2362 1804 161 7 7 chr20 52192939 52193237 -19960645 - AluSx SINE Alu -14 298 1 455 282 58 50 chr20 52193237 52193354 -19960528 - L1M4 LINE L1 -3784 2362 2247 2461 204 22 9 chr20 52193482 52193944 -19959938 - MER82 DNA MER2_type -3 650 183 2292 96 0 3 chr20 52193944 52194237 -19959645 - AluSc SINE Alu -17 292 1 2186 123 3 0 chr20 52194265 52194575 -19959307 + AluSx SINE Alu 1 311 -1 907 165 100 12 chr20 52194699 52194869 -19959013 - MER82 DNA MER2_type -468 185 1 245 307 117 47 chr20 52194889 52195189 -19958693 - MLT1I LTR MaLR -36 373 53 1029 71 0 0 chr20 52195441 52195567 -19958315 + AluSg/x SINE Alu 76 201 -109 679 241 148 0 chr20 52196478 52196694 -19957188 - L1ME3A LINE L1 -223 5930 5683 358 58 135 0 chr20 52196709 52196761 -19957121 + L1PA7 LINE L1 6089 6147 -7 290 167 51 0 chr20 52196766 52196844 -19957038 + Charlie1 DNA MER1_type 2548 2629 -132 1013 274 49 30 chr20 52196884 52197359 -19956523 - L1ME3A LINE L1 -447 5698 5203 375 312 69 92 chr20 52197518 52197859 -19956023 - L1ME3A LINE L1 -5317 802 455 2298 94 0 7 chr20 52197859 52198156 -19955726 - AluSg SINE Alu -15 295 1 375 312 69 92 chr20 52198156 52198565 -19955317 - L1ME3A LINE L1 -5664 455 69 832 115 85 24 chr20 52199104 52199269 -19954613 - L1MA7 LINE L1 -4 6287 6113 235 301 134 16 chr20 52199279 52199585 -19954297 - L1M4 LINE L1 -768 5378 5037 3021 218 90 38 chr20 52199618 52200782 -19953100 + L1MDa LINE L1 16 1421 -5119 3047 81 95 2 chr20 52200784 52201194 -19952688 - LTR7 LTR ERV1 -2 448 1 2099 99 67 24 chr20 52201194 52201568 -19952314 - HERVH LTR ERV1 0 7713 7324 793 118 34 0 chr20 52201568 52201687 -19952195 - HERVH LTR ERV1 -1894 5819 5697 * 3733 110 0 2 chr20 52201680 52202225 -19951657 - HERVH LTR ERV1 -2682 5031 4488 5495 99 11 2 chr20 52202227 52203074 -19950808 - HERVH LTR ERV1 -3720 3993 3140 * 9818 102 13 30 chr20 52203053 52204681 -19949201 - HERVH LTR ERV1 -4718 2995 1395 243 0 0 0 chr20 52205447 52205474 -19948408 + (TTG)n Simple_repeat Simple_repeat 1 27 0 197 295 42 42 chr20 52205571 52205666 -19948216 - MIR SINE MIR -74 188 94 2228 240 76 21 chr20 52206990 52207566 -19946316 - L1ME3 LINE L1 -62 6169 5626 2484 64 0 0 chr20 52207566 52207861 -19946021 - AluY SINE Alu -16 295 1 2228 240 76 21 chr20 52207861 52208327 -19945555 - L1ME3 LINE L1 -605 5626 5070 919 246 54 44 chr20 52208407 52208960 -19944922 - L1ME3 LINE L1 -3605 2610 2095 1089 216 14 0 chr20 52209164 52209377 -19944505 - MER20 DNA MER1_type -1 218 3 558 292 69 38 chr20 52209380 52209475 -19944407 - L1ME3 LINE L1 -4580 1816 1725 2239 124 13 0 chr20 52209475 52209782 -19944100 - AluSx SINE Alu -1 311 1 558 292 69 38 chr20 52209782 52210468 -19943414 - L1ME3 LINE L1 -4671 1725 1011 5264 210 34 48 chr20 52210475 52212253 -19941629 - L1P3 LINE L1 -3902 2559 794 1977 121 0 0 chr20 52212276 52212541 -19941341 + AluSx SINE Alu 31 295 -17 2267 120 3 0 chr20 52213630 52213939 -19939943 - AluSx SINE Alu -2 310 1 1859 136 0 0 chr20 52215610 52215867 -19938015 - AluSx SINE Alu -18 294 38 860 328 22 25 chr20 52216314 52216634 -19937248 + MER115 DNA AcHobo 56 374 -319 385 215 30 7 chr20 52216678 52216813 -19937069 - L1ME4a LINE L1 0 6121 5984 324 119 0 0 chr20 52216840 52216899 -19936983 + (TG)n Simple_repeat Simple_repeat 1 59 0 378 91 0 0 chr20 52217196 52217251 -19936631 + (TC)n Simple_repeat Simple_repeat 2 56 0 1155 117 11 0 chr20 52218007 52218186 -19935696 - Tigger1 DNA MER2_type -2237 181 1 432 253 33 13 chr20 52218196 52218346 -19935536 - L1M4 LINE L1 -3516 2630 2478 24 53 0 0 chr20 52218380 52218418 -19935464 + AT_rich Low_complexity Low_complexity 1 38 0 9442 207 79 36 chr20 52218418 52219274 -19934608 - L1MA9 LINE L1 -40 7691 6874 405 0 0 0 chr20 52219274 52219319 -19934563 + (TG)n Simple_repeat Simple_repeat 1 45 0 9442 207 79 36 chr20 52219319 52221530 -19932352 - L1MA9 LINE L1 -857 6874 4357 2433 78 0 0 chr20 52221530 52221825 -19932057 - AluY SINE Alu -16 295 1 9442 207 79 36 chr20 52221825 52223024 -19930858 - L1MA9 LINE L1 -3374 4357 3212 1298 243 31 10 chr20 52223038 52223187 -19930695 - L1MA9 LINE L1 -4241 3325 3181 2078 153 0 10 chr20 52223187 52223500 -19930382 - AluSx SINE Alu -2 310 1 1298 243 31 10 chr20 52223500 52223825 -19930057 - L1MA9 LINE L1 -4385 3181 2689 1035 293 41 0 chr20 52223904 52224218 -19929664 + MLT1J2 LTR MaLR 6 332 -118 2211 117 7 3 chr20 52225731 52226040 -19927842 - AluSg SINE Alu 0 310 1 309 243 84 9 chr20 52226990 52227097 -19926785 - L1ME4a LINE L1 -7 6114 6000 410 358 50 0 chr20 52228166 52228384 -19925498 - L1ME LINE L1 -386 5735 5507 633 324 29 29 chr20 52228458 52228699 -19925183 + MIR SINE MIR 20 260 -2 511 212 108 104 chr20 52228841 52229053 -19924829 - L2 LINE L2 -1 3312 3100 403 331 25 45 chr20 52229117 52229359 -19924523 + L1M4 LINE L1 3952 4188 -1958 514 172 205 0 chr20 52229580 52229702 -19924180 - MER3 DNA MER1_type -1 208 62 259 167 0 0 chr20 52229820 52229862 -19924020 - MER3 DNA MER1_type -167 42 1 180 0 0 0 chr20 52230660 52230680 -19923202 + (TTTC)n Simple_repeat Simple_repeat 1 20 0 300 303 71 39 chr20 52230928 52231083 -19922799 + MIR SINE MIR 11 170 -92 665 168 0 8 chr20 52232020 52232139 -19921743 - Tigger1 DNA MER2_type 0 2418 2301 24 67 0 0 chr20 52232149 52232194 -19921688 + AT_rich Low_complexity Low_complexity 1 45 0 10906 104 43 155 chr20 52232349 52233714 -19920168 - Tigger1 DNA MER2_type -105 2313 796 2147 120 0 10 chr20 52233714 52234015 -19919867 + AluSg SINE Alu 1 298 -12 10906 104 43 155 chr20 52234015 52234066 -19919816 - Tigger1 DNA MER2_type -1622 796 741 1019 203 149 15 chr20 52234066 52234327 -19919555 - AluJo SINE Alu -5 297 2 10906 104 43 155 chr20 52234327 52235515 -19918367 - Tigger1 DNA MER2_type -1677 741 1 713 251 47 35 chr20 52235944 52236282 -19917600 + L1MEc LINE L1 1599 1940 -4456 2244 120 0 3 chr20 52236282 52236590 -19917292 + AluSx SINE Alu 1 307 -5 1931 140 32 0 chr20 52236858 52237143 -19916739 + AluSx SINE Alu 1 294 -18 427 285 71 69 chr20 52237178 52237615 -19916267 - L1MDa LINE L1 -3660 2880 2443 2941 189 3 21 chr20 52237952 52238517 -19915365 + MER68 LTR ERV1 8 562 0 366 329 85 9 chr20 52238552 52238868 -19915014 - HAL1 LINE L1 -769 1738 1399 410 210 49 31 chr20 52239124 52239286 -19914596 - L1MC4 LINE L1 -140 7902 7738 2132 99 46 0 chr20 52239897 52240179 -19913703 + AluSq SINE Alu 1 295 -18 9513 149 13 34 chr20 52240180 52240452 -19913430 - L1MA5A LINE L1 -4 6293 6017 2252 96 0 3 chr20 52240452 52240745 -19913137 + AluSg SINE Alu 3 294 -16 9513 149 13 34 chr20 52240745 52241547 -19912335 - L1MA5A LINE L1 -280 6017 5200 1793 145 38 41 chr20 52241547 52241912 -19911970 - THE1B LTR MaLR 0 364 1 9513 149 13 34 chr20 52241912 52242344 -19911538 - L1MA5A LINE L1 -1097 5200 4761 2290 117 0 16 chr20 52242344 52242661 -19911221 - AluSq SINE Alu -1 312 1 9513 149 13 34 chr20 52242661 52244130 -19909752 - L1MA5A LINE L1 -1536 4761 3380 599 181 90 42 chr20 52244133 52244277 -19909605 - MER21B LTR ERV1 -385 478 328 301 307 44 15 chr20 52244318 52244588 -19909294 - L1M4 LINE L1 -3307 2839 2562 317 322 86 41 chr20 52244677 52244944 -19908938 - MLT1J2 LTR MaLR -23 427 149 354 160 40 0 chr20 52245193 52245268 -19908614 - MER21A LTR ERV1 -369 562 485 237 294 0 0 chr20 52245635 52245703 -19908179 + (TATATG)n Simple_repeat Simple_repeat 1 68 0 21 0 0 0 chr20 52245763 52245784 -19908098 + AT_rich Low_complexity Low_complexity 1 21 0 11166 121 17 34 chr20 52249100 52249283 -19904599 + Tigger1 DNA MER2_type 1 186 -2232 2138 121 7 0 chr20 52249283 52249573 -19904309 + AluSq SINE Alu 2 293 -20 11166 121 17 34 chr20 52249573 52251216 -19902666 + Tigger1 DNA MER2_type 186 1795 -623 1375 196 0 84 chr20 52251216 52251538 -19902344 - AluJo SINE Alu -17 295 1 11166 121 17 34 chr20 52251538 52251622 -19902260 + Tigger1 DNA MER2_type 1795 1879 -539 886 116 0 23 chr20 52251622 52251751 -19902131 + FRAM SINE Alu 33 158 -18 2950 139 88 2 chr20 52251786 52252288 -19901594 + Tigger1 DNA MER2_type 1874 2418 0 2377 105 0 0 chr20 52252307 52252613 -19901269 + AluSx SINE Alu 1 306 -6 7096 188 50 23 chr20 52253790 52255793 -19898089 - L1MA8 LINE L1 0 7251 5304 2315 67 40 7 chr20 52255793 52256093 -19897789 - AluY SINE Alu -1 310 1 7096 188 50 23 chr20 52256093 52256541 -19897341 - L1MA8 LINE L1 -1947 5304 4679 2385 155 68 10 chr20 52256541 52256940 -19896942 - MSTB LTR MaLR -2 424 3 7096 188 50 23 chr20 52256940 52256998 -19896884 - L1MA8 LINE L1 -2572 4679 4624 6733 208 83 47 chr20 52257932 52259762 -19894120 - L1MA8 LINE L1 -2447 4659 2896 1676 145 57 11 chr20 52259762 52260044 -19893838 + AluSx SINE Alu 5 299 -13 6733 208 83 47 chr20 52260044 52260894 -19892988 - L1MA8 LINE L1 -4210 2896 2078 1776 135 21 31 chr20 52260894 52261183 -19892699 - AluJb SINE Alu -25 287 2 6733 208 83 47 chr20 52261183 52261559 -19892323 - L1MA8 LINE L1 -5028 2078 1717 9563 24 1 236 chr20 52261559 52263371 -19890511 - SVA Other Other 0 1386 1 6733 208 83 47 chr20 52263371 52264719 -19889163 - L1MA8 LINE L1 -5389 1717 389 538 239 14 7 chr20 52264721 52264863 -19889019 - L1MC4a LINE L1 -1288 6520 6378 270 73 0 0 chr20 52266787 52266828 -19887054 + (GA)n Simple_repeat Simple_repeat 2 42 0 2028 76 8 8 chr20 52267451 52267714 -19886168 - L1PA14 LINE L1 -2 6159 5897 244 218 36 0 chr20 52267741 52267796 -19886086 - MIR SINE MIR -9 253 197 665 177 9 9 chr20 52267797 52267910 -19885972 + MER47A DNA MER2_type 2 114 -252 331 273 0 0 chr20 52267933 52268021 -19885861 - L1ME LINE L1 -335 5827 5740 42948 53 5 1 chr20 52268021 52274133 -19879749 + L1PA4 LINE L1 18 6152 -3 932 91 0 8 chr20 52274268 52274400 -19879482 + MER47A DNA MER2_type 113 243 -123 24 53 0 0 chr20 52274511 52274549 -19879333 + AT_rich Low_complexity Low_complexity 1 38 0 1406 202 9 50 chr20 52274569 52274910 -19878972 - L1MA10 LINE L1 -2 6332 6006 * 1669 205 13 3 chr20 52274907 52275292 -19878590 - L1 LINE L1 -2660 3486 3098 * 7029 76 9 1 chr20 52275262 52276597 -19877285 - L1PA7 LINE L1 -1 6153 4807 1411 230 26 13 chr20 52276572 52276954 -19876928 - L1 LINE L1 -3014 3132 2746 * 39683 75 8 8 chr20 52276954 52283109 -19870773 - L1PA3 LINE L1 0 6155 1 701 244 15 32 chr20 52283104 52283442 -19870440 - L1MC4 LINE L1 -201 7841 7400 * 608 257 20 7 chr20 52284232 52284384 -19869498 + MIR SINE MIR 88 241 -21 618 279 70 0 chr20 52284468 52284640 -19869242 - MIR SINE MIR -50 212 29 27 0 0 0 chr20 52285734 52285761 -19868121 + AT_rich Low_complexity Low_complexity 1 27 0 200 308 0 0 chr20 52285761 52285813 -19868069 + MIR SINE MIR 62 113 -95 1063 159 95 0 chr20 52285850 52286039 -19867843 - Tigger1 DNA MER2_type 0 2418 2212 9948 204 38 44 chr20 52286098 52289146 -19864736 + L1MB4 LINE L1 2873 5905 -275 4118 137 24 8 chr20 52288749 52289405 -19864477 + L1PA15 LINE L1 5498 6164 -1 * 12725 128 66 27 chr20 52289406 52291460 -19862422 - Tigger1 DNA MER2_type -187 2231 89 2480 75 0 0 chr20 52291460 52291765 -19862117 + AluY SINE Alu 1 305 -6 12725 128 66 27 chr20 52291765 52291858 -19862024 - Tigger1 DNA MER2_type -2329 89 1 23 54 0 0 chr20 52291997 52292034 -19861848 + AT_rich Low_complexity Low_complexity 1 37 0 5348 145 16 13 chr20 52292106 52293001 -19860881 - L1MA7 LINE L1 0 7710 6814 4616 174 17 6 chr20 52293043 52293923 -19859959 - L1MA7 LINE L1 -745 6820 5931 694 172 0 16 chr20 52293924 52294052 -19859830 + LTR47B LTR ERVL 318 443 0 1837 232 74 38 chr20 52294053 52294923 -19858959 - L1MA7 LINE L1 -4246 3320 2277 720 330 71 28 chr20 52295275 52295738 -19858144 - L1MA7 LINE L1 -5797 1699 1217 1630 263 24 23 chr20 52295995 52296527 -19857355 - L1M1 LINE L1 -4324 3241 2709 * 6249 236 44 37 chr20 52296521 52296702 -19857180 - L1M1 LINE L1 -5296 2190 2012 2494 155 70 2 chr20 52296702 52297103 -19856779 + MSTA LTR MaLR 1 428 0 6249 236 44 37 chr20 52297103 52297568 -19856314 - L1M1 LINE L1 -5474 2012 1552 1995 135 4 4 chr20 52297568 52297849 -19856033 + AluSx SINE Alu 1 281 -31 183 42 0 0 chr20 52297852 52297876 -19856006 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 6249 236 44 37 chr20 52297876 52298885 -19854997 - L1M1 LINE L1 -5935 1551 841 218 213 44 0 chr20 52300716 52300781 -19853101 + MIR SINE MIR 84 140 -68 1965 145 17 3 chr20 52303204 52303500 -19850382 - AluSx SINE Alu -12 300 1 5824 88 45 19 chr20 52303556 52304397 -19849485 - L1PA10 LINE L1 -9 6159 5297 279 0 0 0 chr20 52304400 52304431 -19849451 + (TTA)n Simple_repeat Simple_repeat 3 33 0 44885 36 9 1 chr20 52304431 52310521 -19843361 - L1PA3 LINE L1 -18 6137 1 2373 132 14 0 chr20 52310521 52310892 -19842990 - L1PA10 LINE L1 -838 5308 4933 754 266 32 0 chr20 52310890 52311138 -19842744 + L1M4 LINE L1 2302 2557 -3589 * 2398 201 115 80 chr20 52311140 52311870 -19842012 + MER21B LTR ERV1 3 758 -105 1408 185 88 8 chr20 52311891 52312243 -19841639 + L1M4 LINE L1 2553 2932 -3214 1080 148 35 6 chr20 52312243 52312412 -19841470 + AluJo SINE Alu 1 174 -138 2181 225 14 43 chr20 52312415 52312544 -19841338 + L1M4 LINE L1 2920 3051 -3095 2401 76 0 7 chr20 52312544 52312846 -19841036 + AluSc SINE Alu 1 300 -9 2181 225 14 43 chr20 52312846 52313417 -19840465 + L1M4 LINE L1 3051 3600 -2546 425 215 16 16 chr20 52313416 52313537 -19840345 + L1M4 LINE L1 3898 4018 -2128 * 1904 223 49 4 chr20 52313534 52313843 -19840039 + L1 LINE L1 2445 2784 -3362 7961 31 7 0 chr20 52313843 52314751 -19839131 + L1PA5 LINE L1 5236 6149 -5 1904 223 49 4 chr20 52314751 52314912 -19838970 + L1 LINE L1 2784 2936 -3210 * 5439 120 22 32 chr20 52314909 52316178 -19837704 - L1P4 LINE L1 -460 5714 4465 234 114 0 0 chr20 52316218 52316253 -19837629 - L1PB1 LINE L1 -188 5963 5929 272 229 115 31 chr20 52318432 52318528 -19835354 - L2 LINE L2 -1 3312 3209 504 245 106 43 chr20 52318755 52318865 -19835017 + MIR SINE MIR 42 144 -118 315 65 0 0 chr20 52318865 52318911 -19834971 + (TA)n Simple_repeat Simple_repeat 2 47 0 2499 67 0 0 chr20 52318911 52319208 -19834674 - AluY SINE Alu -14 297 1 504 245 106 43 chr20 52319208 52319304 -19834578 + MIR SINE MIR 143 262 0 2248 73 3 77 chr20 52319373 52319700 -19834182 - AluSp SINE Alu -10 303 1 566 221 30 99 chr20 52320724 52320922 -19832960 - MIR SINE MIR -57 205 19 556 279 123 18 chr20 52321944 52322163 -19831719 - MIR SINE MIR -20 242 1 336 253 154 42 chr20 52322189 52322514 -19831368 - L1M4 LINE L1 -1096 5050 4763 2066 146 3 0 chr20 52322514 52322823 -19831059 + AluSx SINE Alu 1 310 -2 336 253 154 42 chr20 52322823 52323027 -19830855 - L1M4 LINE L1 -1383 4763 4390 24649 167 16 34 chr20 52323039 52325682 -19828200 - L1PA11 LINE L1 -8 6481 3791 1474 185 47 40 chr20 52325682 52325979 -19827903 - AluSg SINE Alu 0 300 2 24649 167 16 34 chr20 52325979 52328064 -19825818 - L1PA11 LINE L1 -2698 3791 1900 2097 136 3 0 chr20 52328064 52328358 -19825524 - AluSq SINE Alu -18 295 1 24649 167 16 34 chr20 52328358 52330214 -19823668 - L1PA11 LINE L1 -4589 1900 11 1584 288 54 30 chr20 52330206 52331107 -19822775 - L1M4 LINE L1 -1752 4394 3472 * 2245 124 0 0 chr20 52331120 52331419 -19822463 - AluSg SINE Alu -11 299 1 6766 164 50 14 chr20 52331445 52333620 -19820262 - L1MB1 LINE L1 -1 6167 3917 698 194 0 0 chr20 52333620 52333751 -19820131 - AluSg/x SINE Alu 0 313 183 240 313 0 0 chr20 52333794 52333861 -19820021 - L2 LINE L2 -18 3295 3229 1669 207 49 12 chr20 52334998 52335424 -19818458 - MER69 DNA AcHobo 0 2526 2085 350 230 27 0 chr20 52335872 52335946 -19817936 - MER69 DNA AcHobo -1149 77 2 750 195 82 36 chr20 52336305 52336500 -19817382 + MER3 DNA MER1_type 1 204 -5 2238 116 0 0 chr20 52337122 52337415 -19816467 - AluSg SINE Alu -17 293 1 202 323 69 15 chr20 52337533 52337663 -19816219 - MIR SINE MIR -79 183 47 555 256 153 22 chr20 52338296 52338519 -19815363 - MIR SINE MIR -2 260 9 183 315 82 0 chr20 52338530 52338603 -19815279 - L2 LINE L2 -40 3273 3195 318 278 21 56 chr20 52338673 52338817 -19815065 - MIR3 SINE MIR -63 145 7 264 183 232 12 chr20 52341481 52341563 -19812319 - MIR SINE MIR -64 144 45 2152 122 0 10 chr20 52342124 52342427 -19811455 - AluSx SINE Alu -12 300 1 377 369 146 22 chr20 52342514 52342967 -19810915 + L2 LINE L2 883 1391 -1923 768 306 80 17 chr20 52343057 52343592 -19810290 - L1 LINE L1 -1979 4167 3599 1540 241 69 39 chr20 52343653 52343930 -19809952 - L1MC4a LINE L1 -1905 5903 5605 2342 92 0 0 chr20 52343930 52344223 -19809659 + AluSg SINE Alu 1 293 -17 1540 241 69 39 chr20 52344223 52344410 -19809472 - L1MC4a LINE L1 -2203 5605 5425 * 2764 162 25 74 chr20 52344405 52344920 -19808962 - L1MB5 LINE L1 -309 6507 6044 2315 99 0 3 chr20 52344920 52345222 -19808660 - AluSx SINE Alu -11 301 1 2764 162 25 74 chr20 52345222 52345602 -19808280 - L1MB5 LINE L1 -772 6044 5647 621 225 39 0 chr20 52345659 52345788 -19808094 - LTR42 LTR ERVL -361 134 1 848 231 56 54 chr20 52345806 52345863 -19808019 - L1MB5 LINE L1 -1484 5304 5249 2459 93 0 0 chr20 52345863 52346174 -19807708 + AluSx SINE Alu 1 311 -1 848 231 56 54 chr20 52346174 52346256 -19807626 - L1MB5 LINE L1 -1539 5249 5169 1811 138 123 0 chr20 52346256 52346524 -19807358 + AluJb SINE Alu 2 302 0 848 231 56 54 chr20 52346524 52346950 -19806932 - L1MB5 LINE L1 -1619 5169 4619 6717 171 27 25 chr20 52347052 52347293 -19806589 - L1MB5 LINE L1 -4069 2720 2481 1911 74 0 0 chr20 52347293 52347524 -19806358 - AluY SINE Alu -4 307 77 1662 191 20 3 chr20 52347532 52347831 -19806051 - AluJb SINE Alu -8 304 1 6717 171 27 25 chr20 52347831 52349163 -19804719 - L1MB5 LINE L1 -4314 2475 1145 1658 175 19 88 chr20 52349442 52349819 -19804063 - MLT1A1 LTR MaLR -10 355 5 490 208 94 0 chr20 52349823 52349929 -19803953 + L1MA9 LINE L1 6123 6238 -74 232 128 0 21 chr20 52349933 52349980 -19803902 + LTR66 LTR ERVL 394 439 -171 486 105 2 10 chr20 52349981 52350062 -19803820 + L1MA9 LINE L1 6240 6333 -1 5698 173 35 35 chr20 52350140 52351233 -19802649 + L1MA7 LINE L1 3911 5010 -1189 698 103 0 0 chr20 52351233 52351320 -19802562 + AluSp/q SINE Alu 208 294 -19 5698 173 35 35 chr20 52351320 52351761 -19802121 + L1MA7 LINE L1 5010 5450 -749 5945 124 169 89 chr20 52351761 52353215 -19800667 + pTR5 LTR ERV1 108 2369 -69 2173 105 0 3 chr20 52353215 52353509 -19800373 + AluY SINE Alu 1 293 -18 5945 124 169 89 chr20 52353509 52353586 -19800296 + pTR5 LTR ERV1 2369 2438 0 2327 145 8 10 chr20 52353586 52353973 -19799909 + L1MA7 LINE L1 5447 5832 -459 2129 143 41 14 chr20 52354131 52354572 -19799310 + L1MA7 LINE L1 5813 6265 -26 1734 156 0 55 chr20 52354574 52354882 -19799000 + AluJo SINE Alu 1 291 -21 420 219 0 37 chr20 52354884 52355071 -19798811 + (TA)n Simple_repeat Simple_repeat 1 180 0 316 283 0 27 chr20 52355084 52355268 -19798614 + (TA)n Simple_repeat Simple_repeat 1 179 0 338 269 5 38 chr20 52355379 52355565 -19798317 + (TA)n Simple_repeat Simple_repeat 1 180 0 336 322 14 20 chr20 52356517 52356663 -19797219 - HERVL LTR ERVL -768 4996 4852 1788 183 7 3 chr20 52357047 52357342 -19796540 + AluJb SINE Alu 1 296 -16 922 217 0 0 chr20 52357348 52357505 -19796377 + AluJb SINE Alu 137 293 -19 650 121 0 85 chr20 52357546 52357644 -19796238 + L1MB4 LINE L1 6052 6136 -44 1814 151 32 0 chr20 52357644 52357923 -19795959 + AluSx SINE Alu 1 288 -24 650 121 0 85 chr20 52357923 52357965 -19795917 + L1MB4 LINE L1 6136 6180 0 2241 97 0 13 chr20 52358313 52358611 -19795271 - AluSc SINE Alu -15 294 1 279 0 0 0 chr20 52358624 52358655 -19795227 + (TG)n Simple_repeat Simple_repeat 2 32 0 735 165 0 0 chr20 52358655 52358770 -19795112 - AluJb SINE Alu -197 115 1 338 260 76 31 chr20 52358814 52359019 -19794863 - HERVL LTR ERVL -1781 3983 3724 2552 69 0 0 chr20 52360377 52360682 -19793200 - AluY SINE Alu -6 305 1 1968 152 0 3 chr20 52360826 52361115 -19792767 + AluSx SINE Alu 1 288 -24 414 195 0 0 chr20 52361116 52361203 -19792679 + (TA)n Simple_repeat Simple_repeat 1 87 0 350 245 0 43 chr20 52361204 52361298 -19792584 + L1MC4 LINE L1 6614 6703 -1339 1454 185 59 13 chr20 52361306 52361609 -19792273 + MLT2D LTR ERVL 98 414 0 277 381 0 0 chr20 52362182 52362350 -19791532 + (CCA)n Simple_repeat Simple_repeat 1 168 0 2189 129 0 0 chr20 52362458 52362753 -19791129 - AluSx SINE Alu -17 295 1 189 289 141 25 chr20 52362850 52362971 -19790911 - MIR3 SINE MIR -19 189 55 2292 229 48 11 chr20 52363155 52363888 -19789994 + L1M4 LINE L1 3325 4084 -2062 472 253 92 52 chr20 52363958 52364207 -19789675 - L1M4 LINE L1 -2878 3268 3010 2092 113 0 23 chr20 52365209 52365519 -19788363 + AluSx SINE Alu 1 303 -9 4480 194 23 31 chr20 52366297 52367220 -19786662 + L1M2 LINE L1 1617 2546 -4303 1667 197 20 3 chr20 52367220 52367519 -19786363 + AluJb SINE Alu 1 304 -8 1911 74 0 0 chr20 52367527 52367758 -19786124 + AluY SINE Alu 77 307 -4 4480 194 23 31 chr20 52367758 52368018 -19785864 + L1M2 LINE L1 2553 2799 -4050 883 79 0 0 chr20 52368018 52368132 -19785750 + AluSc SINE Alu 1 114 -195 544 107 0 0 chr20 52368132 52368207 -19785675 + AluSc SINE Alu 227 301 -8 2742 213 56 1 chr20 52368207 52368840 -19785042 + L1M2 LINE L1 2793 3487 -3361 7451 33 7 0 chr20 52368840 52369748 -19784134 + L1PA5 LINE L1 5236 6149 -5 2742 213 56 1 chr20 52369748 52369909 -19783973 + L1M2 LINE L1 3487 3638 -3210 * 5011 122 22 32 chr20 52369906 52371175 -19782707 - L1P4 LINE L1 -460 5714 4465 278 229 115 31 chr20 52373429 52373525 -19780357 - L2 LINE L2 -1 3312 3209 523 245 106 43 chr20 52373752 52373862 -19780020 + MIR SINE MIR 42 144 -118 228 100 0 0 chr20 52373862 52373902 -19779980 + (TA)n Simple_repeat Simple_repeat 2 41 0 2529 69 0 0 chr20 52373902 52374207 -19779675 - AluY SINE Alu -6 305 1 523 245 106 43 chr20 52374207 52374303 -19779579 + MIR SINE MIR 143 262 0 2238 74 3 77 chr20 52374371 52374697 -19779185 - AluSp SINE Alu -11 302 1 556 243 25 94 chr20 52375722 52375920 -19777962 - MIR SINE MIR -57 205 19 578 279 123 18 chr20 52376942 52377161 -19776721 - MIR SINE MIR -20 242 1 271 274 19 0 chr20 52377187 52377293 -19776589 - L1 LINE L1 -1096 5050 4943 261 210 93 88 chr20 52377437 52377512 -19776370 - L1 LINE L1 -1463 4683 4610 2079 146 3 0 chr20 52377512 52377821 -19776061 + AluSx SINE Alu 1 310 -2 261 210 93 88 chr20 52377821 52377950 -19775932 - L1 LINE L1 -1536 4610 4478 23 0 0 0 chr20 52377991 52378014 -19775868 + AT_rich Low_complexity Low_complexity 1 23 0 22604 168 17 27 chr20 52378039 52380669 -19773213 - L1PA11 LINE L1 -10 7602 4949 1379 188 45 39 chr20 52380669 52380977 -19772905 - AluSg SINE Alu 0 310 1 22604 168 17 27 chr20 52380977 52383061 -19770821 - L1PA11 LINE L1 -2663 4949 2847 2087 139 3 0 chr20 52383061 52383355 -19770527 - AluSq SINE Alu -18 295 1 22604 168 17 27 chr20 52383355 52385211 -19768671 - L1PA11 LINE L1 -4765 2847 11 1248 293 55 26 chr20 52385233 52386104 -19767778 - L1 LINE L1 -1779 4367 3472 2215 130 0 0 chr20 52386117 52386416 -19767466 - AluSg SINE Alu -11 299 1 4776 187 36 14 chr20 52386442 52388614 -19765268 - L1MB1 LINE L1 -1 6167 3916 756 185 0 0 chr20 52388614 52388744 -19765138 - AluSg/x SINE Alu 0 312 183 252 313 0 0 chr20 52388787 52388854 -19765028 - L2 LINE L2 -18 3295 3229 1475 207 49 12 chr20 52389991 52390417 -19763465 - MER69 DNA AcHobo 0 2526 2085 325 230 27 0 chr20 52390865 52390939 -19762943 - MER69 DNA AcHobo -1149 77 2 653 200 82 36 chr20 52391298 52391493 -19762389 + MER3 DNA MER1_type 1 204 -5 2234 116 0 0 chr20 52392115 52392407 -19761475 - AluSg SINE Alu -18 292 1 203 294 40 21 chr20 52392525 52392655 -19761227 - MIR SINE MIR -62 146 47 567 256 153 22 chr20 52393288 52393511 -19760371 - MIR SINE MIR -2 260 9 181 315 82 0 chr20 52393522 52393595 -19760287 - L2 LINE L2 -40 3273 3195 335 278 21 56 chr20 52393665 52393809 -19760073 - MIR3 SINE MIR -63 145 7 568 144 10 31 chr20 52444717 52444814 -19709068 - AluSq/x SINE Alu -204 108 14 2262 100 0 0 chr20 52445146 52445445 -19708437 - AluSg SINE Alu -11 299 1 778 275 91 45 chr20 52445452 52446061 -19707821 - L2 LINE L2 -8 3264 2524 1859 144 14 0 chr20 52446061 52446339 -19707543 - AluJb SINE Alu -15 297 16 778 275 91 45 chr20 52446339 52446497 -19707385 - L2 LINE L2 -748 2524 2375 397 283 28 0 chr20 52447847 52447953 -19705929 + MIR SINE MIR 89 197 -65 423 228 41 55 chr20 52447980 52448125 -19705757 + MIR SINE MIR 70 212 -50 1707 175 0 10 chr20 52448128 52448419 -19705463 + AluJo SINE Alu 1 288 -24 732 142 0 0 chr20 52448470 52448576 -19705306 + FLAM_C SINE Alu 2 107 -36 367 233 25 42 chr20 52448592 52448712 -19705170 - MIR SINE MIR -36 226 109 1007 145 6 6 chr20 52448714 52448873 -19705009 - FRAM SINE Alu -17 159 1 267 235 0 0 chr20 52448903 52448954 -19704928 + MER58B DNA MER1_type 1 51 -290 * 581 235 23 0 chr20 52448947 52449079 -19704803 + MER58B DNA MER1_type 202 336 -5 1798 151 7 20 chr20 52449303 52449607 -19704275 + AluJo SINE Alu 1 300 -12 209 274 36 48 chr20 52449733 52449817 -19704065 - MIR SINE MIR -80 128 46 807 178 8 0 chr20 52451693 52451822 -19702060 - FLAM_A SINE Alu -3 130 1 273 313 54 27 chr20 52452311 52452423 -19701459 - MIR SINE MIR -55 207 93 431 255 54 27 chr20 52452710 52452859 -19701023 + MER5A DNA MER1_type 37 189 0 288 327 35 0 chr20 52452862 52452975 -19700907 - MIR3 SINE MIR -51 157 41 229 314 7 73 chr20 52453040 52453177 -19700705 - MIR SINE MIR -58 150 23 286 287 213 0 chr20 52453575 52453683 -19700199 + MER91A DNA MER1_type 58 188 -8 411 259 26 0 chr20 52453778 52453894 -19699988 - MIR3 SINE MIR -23 185 67 441 233 63 11 chr20 52454223 52454355 -19699527 + MIR SINE MIR 34 168 -62 636 234 142 29 chr20 52454387 52454592 -19699290 - MIR SINE MIR -5 257 30 1704 160 13 13 chr20 52454596 52454761 -19699121 - AluJo SINE Alu -12 300 133 2048 98 0 0 chr20 52454761 52455037 -19698845 - AluSg SINE Alu -9 301 26 881 158 0 0 chr20 52455038 52455171 -19698711 - AluJo/FLAM SINE Alu -169 133 1 899 187 23 51 chr20 52455357 52455503 -19698379 + MER3 DNA MER1_type 2 142 -67 2253 104 3 26 chr20 52455503 52455811 -19698071 - AluSx SINE Alu -9 303 3 899 187 23 51 chr20 52455811 52455878 -19698004 + MER3 DNA MER1_type 142 209 0 713 273 29 10 chr20 52456025 52456234 -19697648 - MIR SINE MIR -48 214 2 200 322 78 52 chr20 52456263 52456378 -19697504 - MIR SINE MIR -72 190 73 2260 118 0 7 chr20 52456604 52456910 -19696972 + AluSx SINE Alu 1 304 -8 23 0 0 0 chr20 52457095 52457118 -19696764 + AT_rich Low_complexity Low_complexity 1 23 0 2094 143 3 0 chr20 52457129 52457422 -19696460 + AluSq SINE Alu 3 296 -17 297 234 42 13 chr20 52457495 52457591 -19696291 - MIR3 SINE MIR -33 175 95 350 276 16 39 chr20 52458352 52458479 -19695403 + MIR SINE MIR 47 170 -92 2558 54 0 6 chr20 52458739 52459052 -19694830 - AluY SINE Alu 0 311 1 225 94 0 0 chr20 52459100 52459132 -19694750 + (CCCCCA)n Simple_repeat Simple_repeat 1 32 0 268 154 0 0 chr20 52459276 52459315 -19694567 - MER81 DNA DNA -1 113 75 24 0 0 0 chr20 52459372 52459396 -19694486 + AT_rich Low_complexity Low_complexity 1 24 0 2103 128 3 0 chr20 52459396 52459685 -19694197 - AluSx SINE Alu -22 290 1 197 0 71 0 chr20 52459685 52459713 -19694169 + (TTTA)n Simple_repeat Simple_repeat 1 30 0 2268 92 0 3 chr20 52459713 52459996 -19693886 - AluSq SINE Alu -31 282 1 2003 135 7 17 chr20 52460001 52460298 -19693584 - AluJb SINE Alu -18 294 1 217 286 52 13 chr20 52460374 52460451 -19693431 - MIR SINE MIR -67 195 116 432 304 175 5 chr20 52460511 52460728 -19693154 + MIR SINE MIR 5 258 -4 2361 101 10 0 chr20 52460904 52461212 -19692670 - AluSx SINE Alu -1 311 1 910 183 110 133 chr20 52461249 52461384 -19692498 - AluJo SINE Alu -8 294 157 1899 166 0 3 chr20 52461384 52461674 -19692208 - AluJb SINE Alu 0 312 24 910 183 110 133 chr20 52461674 52461703 -19692179 - AluJo SINE Alu -145 157 129 2057 101 80 3 chr20 52461703 52461991 -19691891 - AluSg SINE Alu 0 310 1 910 183 110 133 chr20 52461991 52462126 -19691756 - AluJo SINE Alu -173 129 1 783 208 6 6 chr20 52462286 52462445 -19691437 + MIR SINE MIR 94 252 -10 1161 234 173 18 chr20 52462469 52462715 -19691167 + L2 LINE L2 2741 2948 -365 2215 120 7 0 chr20 52462715 52463016 -19690866 - AluSx SINE Alu -8 304 2 1161 234 173 18 chr20 52463016 52463262 -19690620 + L2 LINE L2 2948 3312 -1 2241 117 3 0 chr20 52463382 52463680 -19690202 + AluSq SINE Alu 1 299 -14 1010 128 0 7 chr20 52464086 52464227 -19689655 + AluSp SINE Alu 86 225 -88 779 115 0 0 chr20 52464227 52464331 -19689551 + AluSp/q SINE Alu 188 291 -22 1556 158 112 3 chr20 52464334 52464637 -19689245 - MER89 LTR ERV1 -222 337 2 1291 136 18 50 chr20 52464734 52464955 -19688927 + AluSp SINE Alu 87 300 -13 295 295 139 40 chr20 52464962 52465135 -19688747 - MIR3 SINE MIR -18 190 1 2301 92 9 19 chr20 52465279 52465594 -19688288 - AluSx SINE Alu 0 312 1 2048 154 0 0 chr20 52468196 52468489 -19685393 + AluJb SINE Alu 1 293 -19 2238 78 3 20 chr20 52468490 52468827 -19685055 + AluSp SINE Alu 1 313 0 903 173 0 54 chr20 52468838 52469006 -19684876 + FRAM SINE Alu 1 159 -17 2093 141 0 3 chr20 52469034 52469368 -19684514 + AluSg SINE Alu 1 310 0 687 155 121 0 chr20 52469372 52469488 -19684394 + FLAM_C SINE Alu 1 130 -3 2367 83 0 43 chr20 52469492 52469817 -19684065 + AluY SINE Alu 1 311 0 269 236 35 125 chr20 52470094 52470238 -19683644 - MER5A DNA MER1_type 0 189 59 23 0 0 0 chr20 52470825 52470848 -19683034 + GC_rich Low_complexity Low_complexity 1 23 0 30 27 0 0 chr20 52470860 52470897 -19682985 + GC_rich Low_complexity Low_complexity 1 37 0 1827 107 118 8 chr20 52472596 52472858 -19681024 + AluSg1 SINE Alu 1 291 -18 1608 152 37 21 chr20 52473610 52473938 -19679944 + MER95 LTR ERV 1 333 -98 2251 108 0 0 chr20 52473974 52474262 -19679620 + AluSx SINE Alu 1 288 -24 304 265 0 48 chr20 52474263 52474346 -19679536 + L1MC4 LINE L1 6624 6702 -1340 * 353 326 0 0 chr20 52474309 52474398 -19679484 - L1MC4 LINE L1 -1339 6703 6615 * 384 255 0 43 chr20 52474347 52474441 -19679441 + L1MC4 LINE L1 6614 6703 -1339 1492 185 59 13 chr20 52474449 52474752 -19679130 + MLT2D LTR ERVL 98 414 0 277 381 0 0 chr20 52475325 52475493 -19678389 + (CCA)n Simple_repeat Simple_repeat 1 168 0 2240 125 0 0 chr20 52475601 52475897 -19677985 - AluSx SINE Alu -16 296 1 2365 233 48 11 chr20 52476296 52477029 -19676853 + L1M4 LINE L1 3325 4084 -2062 593 253 92 52 chr20 52477099 52477348 -19676534 - L1M4 LINE L1 -2878 3268 3010 259 250 30 10 chr20 52478547 52478647 -19675235 - LTR33 LTR ERVL -13 508 407 803 160 0 0 chr20 52479117 52479236 -19674646 - FLAM_C SINE Alu -24 119 1 601 222 54 54 chr20 52479244 52479447 -19674435 + MER112 DNA MER1_type 46 248 -12 728 349 39 42 chr20 52480299 52480520 -19673362 - L2 LINE L2 -21 3292 3072 1908 125 47 14 chr20 52480520 52480816 -19673066 - AluSx SINE Alu -6 306 1 728 349 39 42 chr20 52480816 52481052 -19672830 - L2 LINE L2 -241 3072 2836 25 31 0 0 chr20 52481281 52481313 -19672569 + AT_rich Low_complexity Low_complexity 1 32 0 1891 140 38 3 chr20 52481452 52481745 -19672137 - AluSx SINE Alu -9 303 1 427 252 175 14 chr20 52481974 52482117 -19671765 + MIR SINE MIR 47 212 -50 2197 116 3 0 chr20 52482180 52482473 -19671409 - AluSq SINE Alu -18 295 2 549 233 23 15 chr20 52483278 52483411 -19670471 + MIR SINE MIR 39 172 -90 969 211 0 0 chr20 52483436 52483602 -19670280 - AluJb SINE Alu -10 302 137 324 279 96 58 chr20 52483754 52483962 -19669920 - L2 LINE L2 0 3313 3098 * 727 311 36 84 chr20 52483945 52484258 -19669624 - L2 LINE L2 -443 2871 2593 2527 70 6 10 chr20 52484258 52484572 -19669310 + AluSq SINE Alu 1 313 0 727 311 36 84 chr20 52484572 52484792 -19669090 - L2 LINE L2 -721 2593 2364 3183 154 62 8 chr20 52484987 52485520 -19668362 + MER68 LTR ERV1 1 562 0 225 65 0 0 chr20 52485654 52485685 -19668197 + (TG)n Simple_repeat Simple_repeat 2 32 0 2099 109 0 31 chr20 52485685 52485978 -19667904 - AluSx SINE Alu -28 284 1 219 336 115 16 chr20 52486013 52486135 -19667747 + MIR3 SINE MIR 45 178 -30 263 287 45 76 chr20 52486524 52486559 -19667323 + L3 LINE CR1 1349 1384 -193 1976 144 3 29 chr20 52486559 52486871 -19667011 + AluJo SINE Alu 1 304 -8 263 287 45 76 chr20 52486871 52486992 -19666890 + L3 LINE CR1 1384 1500 -77 244 333 86 9 chr20 52487817 52487922 -19665960 + MIR SINE MIR 16 128 -80 33 43 0 0 chr20 52488069 52488116 -19665766 + AT_rich Low_complexity Low_complexity 1 47 0 497 282 145 50 chr20 52488497 52488991 -19664891 - MLT1H LTR MaLR -1 548 1 1821 163 3 10 chr20 52489116 52489422 -19664460 + AluJo SINE Alu 1 304 -8 1044 175 0 0 chr20 52489422 52489576 -19664306 + AluJo/FRAM SINE Alu 137 290 -22 182 206 16 0 chr20 52489598 52489661 -19664221 + (TA)n Simple_repeat Simple_repeat 2 65 0 428 386 0 0 chr20 52490038 52490196 -19663686 + MIR3 SINE MIR 3 160 -48 180 0 0 0 chr20 52490277 52490297 -19663585 + (TA)n Simple_repeat Simple_repeat 2 21 0 2273 106 26 0 chr20 52490304 52490606 -19663276 - AluSg SINE Alu 0 310 1 423 0 0 0 chr20 52490610 52490657 -19663225 + (CA)n Simple_repeat Simple_repeat 2 48 0 191 353 27 91 chr20 52490812 52491033 -19662849 - L2 LINE L2 -81 3191 2985 210 235 20 0 chr20 52491541 52491592 -19662290 - L2 LINE L2 -16 3256 3205 2291 106 7 7 chr20 52491974 52492276 -19661606 - AluSq SINE Alu -11 302 1 2365 92 7 0 chr20 52493153 52493448 -19660434 - AluSx SINE Alu -15 297 1 1025 112 0 0 chr20 52493722 52493856 -19660026 - AluSg/x SINE Alu -12 300 167 432 77 0 0 chr20 52493875 52493927 -19659955 + AluSp SINE Alu 103 154 -159 2418 95 0 3 chr20 52494261 52494566 -19659316 + AluSq SINE Alu 1 304 -9 238 147 0 27 chr20 52494794 52494869 -19659013 + (GA)n Simple_repeat Simple_repeat 1 73 0 357 303 38 8 chr20 52496081 52496158 -19657724 + MIR SINE MIR 127 211 -51 2226 125 0 0 chr20 52496158 52496463 -19657419 + AluSx SINE Alu 1 305 -7 357 303 38 8 chr20 52496463 52496517 -19657365 + MIR SINE MIR 211 262 0 1912 67 0 0 chr20 52496583 52496807 -19657075 - AluY SINE Alu -11 300 77 1691 195 20 3 chr20 52496812 52497114 -19656768 - AluJb SINE Alu -5 307 1 6216 163 28 24 chr20 52497114 52498444 -19655438 - L1M2 LINE L1 -4325 2464 1145 1519 186 16 85 chr20 52498723 52499100 -19654782 - MLT1A1 LTR MaLR -10 355 5 416 224 127 8 chr20 52499104 52499238 -19654644 + L1MA9 LINE L1 6123 6272 -40 469 127 0 0 chr20 52499243 52499322 -19654560 + L1MA9 LINE L1 6229 6307 -5 5332 173 32 31 chr20 52499429 52500503 -19653379 + L1MA7 LINE L1 3928 5013 -1192 685 110 0 0 chr20 52500503 52500594 -19653288 + AluSp/q SINE Alu 208 298 -15 5332 173 32 31 chr20 52500594 52501033 -19652849 + L1MA7 LINE L1 5013 5450 -755 6099 131 190 80 chr20 52501033 52502487 -19651395 + pTR5 LTR ERV1 743 2373 -65 2156 116 0 3 chr20 52502487 52502781 -19651101 + AluY SINE Alu 1 293 -18 6099 131 190 80 chr20 52502781 52502855 -19651027 + pTR5 LTR ERV1 2373 2438 0 2199 142 8 10 chr20 52502858 52503245 -19650637 + L1MA7 LINE L1 5447 5832 -459 2170 149 31 14 chr20 52503404 52503848 -19650034 + L1MA7 LINE L1 5814 6265 -26 1799 149 0 50 chr20 52503855 52504156 -19649726 + AluJo SINE Alu 6 291 -21 404 229 0 24 chr20 52504183 52504349 -19649533 + (TA)n Simple_repeat Simple_repeat 1 162 0 311 277 77 59 chr20 52504382 52504602 -19649280 + L1M4c LINE L1 1826 2049 -4335 308 333 13 20 chr20 52505558 52505711 -19648171 - ERVL LTR ERVL -768 4996 4845 1811 183 7 3 chr20 52506088 52506383 -19647499 + AluJb SINE Alu 1 296 -16 918 218 0 0 chr20 52506389 52506545 -19647337 + AluJb SINE Alu 137 292 -20 667 121 0 85 chr20 52506586 52506670 -19647212 + L1MB4 LINE L1 6052 6142 -38 301 222 0 0 chr20 52506670 52506684 -19647198 + AluSg/x SINE Alu 120 133 -167 1726 153 31 0 chr20 52506684 52506971 -19646911 + AluSx SINE Alu 1 296 -16 667 121 0 85 chr20 52506733 52507013 -19646869 + L1MB4 LINE L1 6142 6180 0 2143 103 0 0 chr20 52507361 52507651 -19646231 - AluSc SINE Alu -19 290 1 405 0 0 0 chr20 52507664 52507709 -19646173 + (TG)n Simple_repeat Simple_repeat 2 46 0 737 165 0 0 chr20 52507709 52507824 -19646058 - AluJb SINE Alu -197 115 1 432 326 96 50 chr20 52507868 52508304 -19645578 - ERVL LTR ERVL -1781 3983 3528 2449 69 0 0 chr20 52509432 52509737 -19644145 - AluY SINE Alu -6 305 1 1863 145 0 3 chr20 52509881 52510170 -19643712 + AluSx SINE Alu 1 288 -24 326 304 0 0 chr20 52510171 52510250 -19643632 + L1MC4 LINE L1 6624 6702 -1340 * 366 287 23 0 chr20 52510221 52510308 -19643574 - L1MC4 LINE L1 -1339 6703 6615 * 380 219 0 62 chr20 52510255 52510351 -19643531 + L1MC4 LINE L1 6614 6703 -1339 1607 181 59 13 chr20 52510359 52510662 -19643220 + MLT2D LTR ERVL 98 414 0 277 381 0 0 chr20 52511236 52511404 -19642478 + (CCA)n Simple_repeat Simple_repeat 1 168 0 2092 125 0 0 chr20 52511512 52511808 -19642074 - AluSx SINE Alu -16 296 1 187 289 141 25 chr20 52511905 52512026 -19641856 - MIR3 SINE MIR -19 189 55 2478 232 48 11 chr20 52512210 52512943 -19640939 + L1M4 LINE L1 3325 4084 -2062 581 241 96 56 chr20 52513013 52513262 -19640620 - L1M4 LINE L1 -2878 3268 3010 1986 123 0 16 chr20 52514264 52514574 -19639308 + AluSx SINE Alu 1 305 -7 672 179 9 0 chr20 52515649 52515755 -19638127 + FLAM_A SINE Alu 1 107 -35 593 97 21 0 chr20 52515762 52515855 -19638027 + (TAGA)n Simple_repeat Simple_repeat 1 95 0 2148 107 0 7 chr20 52515855 52516164 -19637718 + AluSg SINE Alu 3 309 -1 779 167 8 0 chr20 52518307 52518433 -19635449 + AluJo/FLAM SINE Alu 6 132 -180 2102 105 3 0 chr20 52518436 52518744 -19635138 + AluSq SINE Alu 1 309 0 1598 186 10 0 chr20 52518749 52519045 -19634837 + AluSx SINE Alu 1 299 -13 5837 179 52 70 chr20 52519055 52519242 -19634640 + L1 LINE L1 3159 3348 -2798 2254 95 3 0 chr20 52519242 52519538 -19634344 - AluSp SINE Alu -16 297 1 5837 179 52 70 chr20 52519538 52519854 -19634028 + L1 LINE L1 3348 3668 -2478 1912 121 3 27 chr20 52519854 52520151 -19633731 + AluSx SINE Alu 1 290 -22 5837 179 52 70 chr20 52520151 52521225 -19632657 + L1 LINE L1 3668 4760 -1386 1302 88 0 0 chr20 52521225 52521407 -19632475 - AluYa5 SINE Alu -3 308 127 5837 179 52 70 chr20 52521407 52521719 -19632163 + L1 LINE L1 4760 5076 -1070 2103 109 0 7 chr20 52521719 52522022 -19631860 + AluSx SINE Alu 1 301 -11 5837 179 52 70 chr20 52522022 52522056 -19631826 + L1 LINE L1 5076 5109 -1037 1640 152 4 22 chr20 52522056 52522333 -19631549 + AluSx SINE Alu 22 293 -19 5837 179 52 70 chr20 52522333 52522389 -19631493 + L1 LINE L1 5109 5164 -982 772 189 0 0 chr20 52522389 52522516 -19631366 + FLAM_C SINE Alu 1 127 -6 5837 179 52 70 chr20 52522516 52522580 -19631302 + L1 LINE L1 5164 5309 -837 1769 134 18 25 chr20 52522594 52522878 -19631004 + AluSx SINE Alu 6 287 -25 257 194 0 82 chr20 52522885 52522983 -19630899 + L1MC4 LINE L1 6614 6703 -1339 397 296 0 0 chr20 52522985 52523073 -19630809 - L1MC4 LINE L1 -1341 6701 6614 381 300 0 0 chr20 52523007 52523097 -19630785 + L1MC4 LINE L1 6614 6703 -1339 * 2191 85 0 48 chr20 52523887 52524067 -19629815 - AluSx SINE Alu -11 301 141 2211 85 0 25 chr20 52524067 52524383 -19629499 - AluY SINE Alu -3 308 1 2191 85 0 48 chr20 52524383 52524518 -19629364 - AluSx SINE Alu -171 141 1 2767 84 88 17 chr20 52524643 52525061 -19628821 + LTR7 LTR ERV1 1 448 -2 9520 177 122 110 chr20 52525063 52529009 -19624873 + HERVH LTR ERV1 1 3993 -3720 3093 134 0 2 chr20 52529011 52529629 -19624253 + HERVH LTR ERV1 4488 5149 -2564 1101 114 0 0 chr20 52529630 52529796 -19624086 + HERVH LTR ERV1 5600 5765 -1948 * 2248 99 56 21 chr20 52529769 52530143 -19623739 + HERVH LTR ERV1 7327 7713 0 2785 85 92 5 chr20 52530143 52530555 -19623327 + LTR7 LTR ERV1 1 448 -2 377 213 13 0 chr20 52530585 52530660 -19623222 + MER5A DNA MER1_type 31 106 -83 1167 193 14 5 chr20 52530998 52531211 -19622671 + MER20 DNA MER1_type 5 219 0 1354 148 0 0 chr20 52532110 52532326 -19621556 + AluJo SINE Alu 87 302 -10 22 35 0 0 chr20 52532403 52532432 -19621450 + AT_rich Low_complexity Low_complexity 1 29 0 349 281 16 0 chr20 52532510 52532631 -19621251 + L1ME4a LINE L1 5935 6057 -64 1009 203 5 5 chr20 52532669 52532871 -19621011 + L1PA15 LINE L1 5964 6165 0 1993 104 24 17 chr20 52533197 52533494 -19620388 + AluSx SINE Alu 1 299 -13 186 271 21 0 chr20 52533554 52533602 -19620280 + MER5B DNA MER1_type 1 49 -129 241 304 11 43 chr20 52533628 52533720 -19620162 + MER5A DNA MER1_type 60 148 -41 2232 117 24 108 chr20 52533736 52534085 -19619797 - L1MB5 LINE L1 -185 5989 5685 1507 184 19 13 chr20 52534085 52534394 -19619488 - AluJo SINE Alu -1 311 1 2232 117 24 108 chr20 52534394 52534499 -19619383 - L1MB5 LINE L1 -489 5685 5573 1805 164 0 20 chr20 52534503 52534802 -19619080 - AluJo SINE Alu -17 295 3 433 178 0 0 chr20 52534814 52534887 -19618995 + Charlie5 DNA MER1_type 2513 2585 -27 2066 125 3 0 chr20 52534997 52535302 -19618580 + AluJb SINE Alu 1 306 -6 2198 105 0 0 chr20 52535366 52535661 -19618221 + AluSc SINE Alu 3 297 -12 351 255 21 83 chr20 52535726 52535793 -19618089 - MIR SINE MIR 0 262 207 2094 110 0 0 chr20 52535793 52536085 -19617797 - AluSx SINE Alu -20 292 1 351 255 21 83 chr20 52536085 52536162 -19617720 - MIR SINE MIR -55 207 127 238 147 0 27 chr20 52537374 52537449 -19616433 + (TC)n Simple_repeat Simple_repeat 1 73 0 2281 94 0 3 chr20 52537677 52537984 -19615898 - AluSq SINE Alu -7 306 1 429 77 0 0 chr20 52538318 52538370 -19615512 - AluSp SINE Alu -159 154 103 963 101 0 0 chr20 52538389 52538518 -19615364 + AluSg/x SINE Alu 165 293 -17 2219 92 7 0 chr20 52538797 52539092 -19614790 + AluSx SINE Alu 1 297 -15 2140 106 7 7 chr20 52539969 52540271 -19613611 + AluSq SINE Alu 1 302 -11 207 235 20 0 chr20 52540653 52540704 -19613178 + L2 LINE L2 3205 3256 -16 180 353 27 91 chr20 52541212 52541433 -19612449 + L2 LINE L2 2985 3191 -81 387 0 0 0 chr20 52541588 52541631 -19612251 + (TG)n Simple_repeat Simple_repeat 2 44 0 2123 106 26 0 chr20 52541635 52541937 -19611945 + AluSg SINE Alu 1 310 0 234 0 0 0 chr20 52541945 52541971 -19611911 + (TA)n Simple_repeat Simple_repeat 2 27 0 423 386 0 0 chr20 52542050 52542208 -19611674 - MIR3 SINE MIR -48 160 3 182 206 16 0 chr20 52542585 52542648 -19611234 + (TA)n Simple_repeat Simple_repeat 2 65 0 975 174 0 0 chr20 52542670 52542825 -19611057 - AluJo/FRAM SINE Alu -22 290 136 1668 162 3 10 chr20 52542827 52543130 -19610752 - AluJo SINE Alu -11 301 1 603 272 152 56 chr20 52543255 52543749 -19610133 + MLT1H LTR MaLR 1 548 -1 32 43 0 0 chr20 52544129 52544175 -19609707 + AT_rich Low_complexity Low_complexity 1 46 0 246 333 86 9 chr20 52544322 52544427 -19609455 - MIR SINE MIR -80 128 16 260 287 45 76 chr20 52545252 52545373 -19608509 - L3 LINE CR1 -77 1500 1384 1831 144 3 29 chr20 52545373 52545686 -19608196 - AluJo SINE Alu -7 305 1 260 287 45 76 chr20 52545686 52545721 -19608161 - L3 LINE CR1 -193 1384 1349 212 336 115 16 chr20 52546110 52546232 -19607650 - MIR3 SINE MIR -30 178 45 1961 109 0 31 chr20 52546267 52546560 -19607322 + AluSx SINE Alu 1 284 -28 207 69 0 0 chr20 52546560 52546589 -19607293 + (CA)n Simple_repeat Simple_repeat 2 30 0 3143 154 62 8 chr20 52546723 52547256 -19606626 - MER68 LTR ERV1 0 562 1 717 309 36 84 chr20 52547451 52547671 -19606211 + L2 LINE L2 2364 2593 -721 2373 70 6 10 chr20 52547671 52547985 -19605897 - AluSq SINE Alu 0 313 1 717 309 36 84 chr20 52547985 52548298 -19605584 + L2 LINE L2 2593 2871 -443 317 279 96 58 chr20 52548281 52548489 -19605393 + L2 LINE L2 3098 3313 0 * 885 211 0 0 chr20 52548641 52548807 -19605075 + AluJb SINE Alu 137 302 -10 546 231 25 0 chr20 52548832 52548953 -19604929 - MIR SINE MIR -90 172 49 2053 109 7 3 chr20 52549770 52550063 -19603819 + AluSq SINE Alu 2 295 -18 424 252 175 14 chr20 52550126 52550269 -19603613 - MIR SINE MIR -50 212 47 1905 126 34 0 chr20 52550498 52550791 -19603091 + AluSx SINE Alu 1 303 -9 25 31 0 0 chr20 52550930 52550962 -19602920 + AT_rich Low_complexity Low_complexity 1 32 0 887 338 38 40 chr20 52551191 52551427 -19602455 + L2 LINE L2 2836 3071 -242 1767 125 47 14 chr20 52551427 52551723 -19602159 + AluSx SINE Alu 1 306 -6 887 338 38 40 chr20 52551723 52551965 -19601917 + L2 LINE L2 3071 3313 0 2193 110 0 0 chr20 52552122 52552431 -19601451 + AluY SINE Alu 1 309 -2 2433 70 0 3 chr20 52552588 52552900 -19600982 - AluY SINE Alu 0 311 1 2201 103 3 3 chr20 52553331 52553643 -19600239 + AluSp SINE Alu 1 312 -1 349 203 412 6 chr20 52553783 52553960 -19599922 - MIR SINE MIR -10 252 4 427 81 0 32 chr20 52554468 52554530 -19599352 + Alu SINE Alu 238 297 -15 2434 67 0 0 chr20 52554534 52554831 -19599051 + AluY SINE Alu 1 297 -14 1904 113 0 0 chr20 52555795 52556061 -19597821 + AluSx SINE Alu 44 309 -3 616 49 0 0 chr20 52556483 52556565 -19597317 - AluY SINE Alu -2 308 227 2354 57 7 0 chr20 52556607 52556906 -19596976 - AluSx SINE Alu -11 301 1 563 322 33 5 chr20 52557540 52557754 -19596128 + MIR SINE MIR 37 256 -6 268 204 216 131 chr20 52558153 52558329 -19595553 + MIR3 SINE MIR 17 207 -1 237 206 29 29 chr20 52558346 52558414 -19595468 + MIR SINE MIR 2 69 -193 1141 45 0 8 chr20 52558590 52558724 -19595158 + AluSp SINE Alu 1 133 -180 2433 78 0 0 chr20 52558727 52559020 -19594862 + AluSx SINE Alu 1 293 -19 236 345 27 9 chr20 52559027 52559137 -19594745 + MIR SINE MIR 151 262 0 2055 138 7 7 chr20 52559432 52559756 -19594126 - AluSx SINE Alu 0 312 1 248 293 49 0 chr20 52559870 52559952 -19593930 + MIR SINE MIR 175 260 -2 798 121 23 15 chr20 52559979 52560111 -19593771 + AluJo/FLAM SINE Alu 1 133 -169 2436 68 7 0 chr20 52560111 52560407 -19593475 - AluY SINE Alu -13 298 1 1993 162 0 0 chr20 52560826 52561129 -19592753 + AluSx SINE Alu 1 303 -9 1724 131 101 3 chr20 52561343 52561679 -19592203 + L1MA9 LINE L1 5944 6312 0 999 302 108 11 chr20 52561952 52562406 -19591476 + L2 LINE L2 1760 2257 -1057 609 324 70 45 chr20 52562408 52562564 -19591318 + L2 LINE L2 2642 2793 -479 7310 30 1 0 chr20 52562564 52563803 -19590079 + L1PA4 LINE L1 4915 6154 -1 609 324 70 45 chr20 52563803 52564176 -19589706 + L2 LINE L2 2793 3272 0 670 317 147 8 chr20 52564318 52564712 -19589170 - L2 LINE L2 -919 2395 1947 468 292 133 48 chr20 52564717 52565114 -19588768 + L2 LINE L2 2850 3280 -33 2128 113 6 50 chr20 52565135 52565453 -19588429 + AluSg SINE Alu 1 304 -6 2439 86 0 10 chr20 52565701 52566004 -19587878 + AluSq SINE Alu 1 300 -13 558 0 0 0 chr20 52566004 52566066 -19587816 + (TA)n Simple_repeat Simple_repeat 2 63 0 1796 134 0 0 chr20 52566069 52566316 -19587566 + AluSx SINE Alu 49 295 -17 1876 166 3 3 chr20 52566815 52567105 -19586777 + AluJo SINE Alu 1 290 -22 275 276 187 0 chr20 52567631 52567754 -19586128 - MIR SINE MIR -42 220 75 1986 137 26 3 chr20 52567788 52568131 -19585751 - L1MC1 LINE L1 0 6333 5983 244 242 150 46 chr20 52568334 52568487 -19585395 - MIR SINE MIR -74 188 20 451 245 24 183 chr20 52568936 52569226 -19584656 - MIR SINE MIR -7 255 12 900 312 120 40 chr20 52569237 52570327 -19583555 + L2 LINE L2 2066 3249 -23 287 283 80 9 chr20 52570741 52570854 -19583028 + MIR3 SINE MIR 5 125 -83 * 547 267 136 34 chr20 52570851 52571087 -19582795 - MIR SINE MIR 0 262 3 1890 96 8 0 chr20 52571111 52571350 -19582532 + AluSp SINE Alu 1 241 -72 2441 81 3 0 chr20 52571383 52571678 -19582204 + AluSp SINE Alu 1 296 -17 2237 102 7 0 chr20 52572437 52572730 -19581152 - AluSx SINE Alu -17 295 1 303 226 21 0 chr20 52572747 52572840 -19581042 - L1M LINE L1 -2402 5406 5312 2256 96 0 17 chr20 52572974 52573267 -19580615 + AluSx SINE Alu 1 288 -24 1939 167 10 0 chr20 52573374 52573667 -19580215 + AluSx SINE Alu 1 296 -16 2307 82 4 0 chr20 52573668 52573948 -19579934 + AluSp SINE Alu 1 281 -32 264 100 0 0 chr20 52573948 52573988 -19579894 + (CAAT)n Simple_repeat Simple_repeat 4 43 0 418 268 92 18 chr20 52574763 52574927 -19578955 - MER117 DNA MER1_type -1 196 21 270 81 0 0 chr20 52575867 52575904 -19577978 + (T)n Simple_repeat Simple_repeat 1 37 0 1093 139 118 90 chr20 52577096 52577384 -19576498 - AluJb SINE Alu -6 296 1 1966 126 7 4 chr20 52579131 52579400 -19574482 + AluSx SINE Alu 1 270 -42 249 109 0 0 chr20 52579410 52579456 -19574426 + (TC)n Simple_repeat Simple_repeat 1 46 0 189 74 0 0 chr20 52579456 52579483 -19574399 + (TA)n Simple_repeat Simple_repeat 1 27 0 350 250 11 43 chr20 52579511 52579603 -19574279 + L1MC4 LINE L1 6615 6703 -1339 2824 20 3 0 chr20 52580140 52580446 -19573436 - AluYb8 SINE Alu -11 307 1 911 152 0 0 chr20 52580546 52580678 -19573204 + AluJb SINE Alu 1 132 -180 232 229 0 0 chr20 52581441 52581489 -19572393 + Alu SINE Alu 168 215 -87 2085 132 7 10 chr20 52581663 52581958 -19571924 + AluSx SINE Alu 1 294 -18 206 295 26 26 chr20 52582377 52582455 -19571427 + MIR SINE MIR 100 177 -85 336 137 192 0 chr20 52583296 52583369 -19570513 + MER5A DNA MER1_type 6 92 -97 1149 192 43 80 chr20 52583481 52583783 -19570099 + AluJo SINE Alu 1 291 -11 514 253 157 80 chr20 52583831 52584194 -19569688 + MLT1K LTR MaLR 189 579 -9 205 385 86 0 chr20 52584234 52584351 -19569531 - L2 LINE L2 -20 3252 3126 2427 98 3 3 chr20 52584403 52584710 -19569172 + AluSq SINE Alu 3 309 -4 381 152 303 0 chr20 52584793 52584892 -19568990 + MIR SINE MIR 127 255 -7 2234 128 0 0 chr20 52585049 52585347 -19568535 + AluSq SINE Alu 1 298 -15 709 169 11 8 chr20 52585413 52585591 -19568291 + AluJo SINE Alu 83 302 -10 186 308 46 0 chr20 52585592 52585657 -19568225 - L2 LINE L2 -535 2779 2712 2328 101 3 10 chr20 52585657 52585964 -19567918 - AluSp SINE Alu -8 305 1 2002 135 32 0 chr20 52585968 52586250 -19567632 - AluSx SINE Alu -21 291 1 27 49 0 0 chr20 52586258 52586299 -19567583 + AT_rich Low_complexity Low_complexity 1 41 0 453 256 169 0 chr20 52586393 52586553 -19567329 + MIR SINE MIR 74 260 -2 1993 140 10 13 chr20 52586674 52586974 -19566908 + AluJb SINE Alu 1 299 -13 2331 99 7 0 chr20 52586974 52587266 -19566616 + AluSq SINE Alu 1 294 -19 646 175 216 0 chr20 52587267 52587438 -19566444 - MIR SINE MIR -24 238 31 342 319 38 21 chr20 52587512 52587747 -19566135 - L2 LINE L2 -217 3055 2817 1746 129 6 89 chr20 52588775 52589100 -19564782 - AluJo SINE Alu -10 302 5 1788 139 30 4 chr20 52590319 52590586 -19563296 - AluJo SINE Alu -38 274 1 2444 82 7 0 chr20 52590597 52590901 -19562981 - AluSx SINE Alu -6 306 1 2292 104 3 19 chr20 52590911 52591229 -19562653 - AluSp SINE Alu 0 313 1 195 322 26 52 chr20 52591410 52591525 -19562357 + L2 LINE L2 3159 3270 -2 216 360 9 18 chr20 52591527 52591638 -19562244 - L2 LINE L2 -8 3264 3155 192 152 0 0 chr20 52591861 52591894 -19561988 + CT-rich Low_complexity Low_complexity 2 34 0 319 306 147 13 chr20 52592935 52593092 -19560790 + MIR3 SINE MIR 3 180 -28 297 243 131 9 chr20 52593235 52593342 -19560540 - MIR SINE MIR -8 254 135 1687 152 11 19 chr20 52593373 52593643 -19560239 - AluJb SINE Alu -40 272 5 2062 123 0 60 chr20 52594272 52594459 -19559423 - AluSx SINE Alu 0 312 115 2511 89 3 6 chr20 52594459 52594772 -19559110 - AluSp SINE Alu 0 313 2 2062 123 0 60 chr20 52594772 52594807 -19559075 - AluSx SINE Alu -197 115 79 2390 66 0 26 chr20 52594807 52595109 -19558773 + AluY SINE Alu 1 294 -17 2062 123 0 60 chr20 52595109 52595217 -19558665 - AluSx SINE Alu -233 79 1 227 277 45 71 chr20 52595282 52595363 -19558519 + L2 LINE L2 2820 2902 -370 2219 114 0 10 chr20 52595363 52595669 -19558213 + AluSg SINE Alu 1 303 -7 227 277 45 71 chr20 52595669 52595854 -19558028 + L2 LINE L2 2902 3079 -193 658 263 0 13 chr20 52596010 52596166 -19557716 + L3 LINE CR1 1357 1510 -67 726 143 0 30 chr20 52596178 52596311 -19557571 + FLAM_C SINE Alu 5 133 0 1718 166 18 4 chr20 52596325 52596603 -19557279 + AluJo SINE Alu 9 290 -22 2107 118 0 82 chr20 52596605 52596995 -19556887 + AluSx SINE Alu 1 362 0 403 309 73 0 chr20 52597029 52597165 -19556717 + MIR3 SINE MIR 60 205 -3 2152 118 7 0 chr20 52597340 52597620 -19556262 + AluSx SINE Alu 1 282 -30 207 0 0 0 chr20 52597629 52597652 -19556230 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 368 274 124 48 chr20 52597666 52597852 -19556030 + MIR SINE MIR 50 249 -13 1668 150 0 8 chr20 52598210 52598476 -19555406 + AluJb SINE Alu 41 304 -8 288 130 0 0 chr20 52598476 52598522 -19555360 + (GA)n Simple_repeat Simple_repeat 1 46 0 215 221 35 18 chr20 52598524 52598589 -19555293 + MIR SINE MIR 71 136 -72 256 253 13 40 chr20 52598745 52598820 -19555062 - MIR SINE MIR -111 151 79 192 111 0 0 chr20 52599687 52599723 -19554159 + (CGA)n Simple_repeat Simple_repeat 1 36 0 312 224 103 52 chr20 52599906 52600022 -19553860 + MIR SINE MIR 69 190 -72 188 214 0 0 chr20 52600079 52600121 -19553761 - L2 LINE L2 -18 3295 3254 259 167 181 0 chr20 52600130 52600202 -19553680 + MIR SINE MIR 108 192 -70 238 206 29 29 chr20 52600538 52600606 -19553276 - MIR SINE MIR -68 140 73 488 299 125 22 chr20 52600788 52601012 -19552870 + MIR SINE MIR 12 258 -4 2569 50 20 0 chr20 52601526 52601828 -19552054 + AluY SINE Alu 1 308 -3 1025 145 19 19 chr20 52601828 52601979 -19551903 - AluJo/FRAM SINE Alu -26 286 133 649 250 53 61 chr20 52602206 52602434 -19551448 + MIR SINE MIR 16 241 -21 275 169 77 15 chr20 52602814 52602879 -19551003 - MER113 DNA MER1_type? -151 370 302 248 289 34 81 chr20 52602921 52602960 -19550922 - MIR3 SINE MIR -21 187 148 1082 209 64 90 chr20 52602960 52603068 -19550814 + MER113 DNA MER1_type? 1 110 -411 2325 109 10 10 chr20 52603068 52603380 -19550502 - AluSx SINE Alu 0 312 1 1739 126 43 66 chr20 52603387 52603689 -19550193 - AluJo SINE Alu -13 299 5 1082 209 64 90 chr20 52603689 52603787 -19550095 + MER113 DNA MER1_type? 116 215 -306 2137 97 0 0 chr20 52603787 52604056 -19549826 + AluSx SINE Alu 6 274 -38 188 65 0 32 chr20 52604056 52604087 -19549795 + (TAAA)n Simple_repeat Simple_repeat 1 30 0 1082 209 64 90 chr20 52604087 52604205 -19549677 + MER113 DNA MER1_type? 214 334 -187 2228 102 7 20 chr20 52604205 52604509 -19549373 - AluSp SINE Alu -13 300 1 1082 209 64 90 chr20 52604509 52604544 -19549338 + MER113 DNA MER1_type? 334 368 -153 2533 51 0 29 chr20 52604544 52604858 -19549024 + AluY SINE Alu 1 305 -6 1082 209 64 90 chr20 52604858 52604919 -19548963 + MER113 DNA MER1_type? 368 429 -92 1569 174 9 60 chr20 52604919 52605235 -19548647 + AluJo SINE Alu 1 300 -12 1082 209 64 90 chr20 52605235 52605336 -19548546 + MER113 DNA MER1_type? 429 521 0 248 289 34 81 chr20 52605336 52605445 -19548437 - MIR3 SINE MIR -60 148 46 764 177 8 0 chr20 52607320 52607450 -19546432 - FLAM_A SINE Alu -2 131 1 266 313 54 27 chr20 52607947 52608059 -19545823 - MIR SINE MIR -55 207 93 431 255 54 27 chr20 52608346 52608495 -19545387 + MER5A DNA MER1_type 37 189 0 286 327 35 0 chr20 52608498 52608611 -19545271 - MIR3 SINE MIR -51 157 41 212 314 7 73 chr20 52608676 52608813 -19545069 - MIR SINE MIR -58 150 23 284 287 213 0 chr20 52609211 52609319 -19544563 + MER91A DNA MER1_type 58 188 -8 397 259 26 0 chr20 52609414 52609530 -19544352 - MIR3 SINE MIR -23 185 67 442 207 63 9 chr20 52609879 52609990 -19543892 + MIR SINE MIR 52 168 -94 638 229 142 29 chr20 52610022 52610227 -19543655 - MIR SINE MIR -5 257 30 1822 160 13 13 chr20 52610231 52610396 -19543486 - AluJo SINE Alu -12 300 133 2168 98 0 0 chr20 52610396 52610672 -19543210 - AluSg SINE Alu -9 301 26 1822 160 13 13 chr20 52610672 52610806 -19543076 - AluJo SINE Alu -178 134 1 855 182 23 51 chr20 52610992 52611138 -19542744 + MER3 DNA MER1_type 2 142 -67 2254 107 3 26 chr20 52611138 52611448 -19542434 - AluSx SINE Alu -7 305 3 855 182 23 51 chr20 52611448 52611515 -19542367 + MER3 DNA MER1_type 142 209 0 609 233 72 25 chr20 52611619 52611840 -19542042 - MIR SINE MIR -4 258 30 187 322 78 52 chr20 52611895 52612010 -19541872 - MIR SINE MIR -72 190 73 2258 121 0 7 chr20 52612236 52612542 -19541340 + AluSx SINE Alu 1 304 -8 23 0 0 0 chr20 52612727 52612750 -19541132 + AT_rich Low_complexity Low_complexity 1 23 0 2102 143 3 0 chr20 52612761 52613054 -19540828 + AluSq SINE Alu 3 296 -17 2067 138 10 3 chr20 52613087 52613384 -19540498 - AluJb SINE Alu -13 299 1 805 154 0 23 chr20 52613390 52613520 -19540362 - FLAM_C SINE Alu -16 127 1 612 222 54 54 chr20 52613528 52613731 -19540151 + MER112 DNA MER1_type 46 248 -12 751 275 81 9 chr20 52614194 52614416 -19539466 + MIR SINE MIR 20 257 -5 235 65 0 0 chr20 52614560 52614591 -19539291 - MER89 LTR ERV1 -27 532 502 1040 180 0 6 chr20 52614591 52614763 -19539119 - AluSg/x SINE Alu -8 304 134 2099 141 0 0 chr20 52614763 52615061 -19538821 - AluSx SINE Alu -14 298 1 1052 144 29 0 chr20 52615063 52615236 -19538646 - MER89 LTR ERV1 -51 508 331 1657 118 0 5 chr20 52615237 52615457 -19538425 + AluSx SINE Alu 1 219 -93 819 106 0 0 chr20 52615461 52615565 -19538317 + AluSp/q SINE Alu 186 289 -24 1579 160 111 3 chr20 52615566 52615873 -19538009 - MER89 LTR ERV1 -218 341 2 1348 160 0 24 chr20 52615971 52616183 -19537699 + AluJo SINE Alu 87 293 -19 267 192 110 0 chr20 52616913 52616986 -19536896 - MIR SINE MIR -61 201 121 281 215 0 0 chr20 52616994 52617059 -19536823 + MER58 DNA MER1_type 174 238 -2182 314 118 39 0 chr20 52617061 52617112 -19536770 + MER58 DNA MER1_type 2364 2416 -4 1020 138 0 72 chr20 52617299 52617480 -19536402 - AluSg/x SINE Alu -11 301 134 2094 123 3 36 chr20 52617480 52617788 -19536094 - AluSx SINE Alu -14 298 1 2304 105 3 6 chr20 52618066 52618379 -19535503 - AluSx SINE Alu 0 312 1 316 328 73 23 chr20 52618548 52618725 -19535157 + MIR SINE MIR 20 205 -57 689 194 8 0 chr20 52619369 52619503 -19534379 - FLAM_C SINE Alu -2 141 7 2410 45 3 61 chr20 52619508 52619819 -19534063 - AluY SINE Alu -18 293 1 322 296 6 113 chr20 52619853 52620012 -19533870 - MIR3 SINE MIR -22 186 45 2373 109 0 0 chr20 52620781 52621083 -19532799 + AluSx SINE Alu 1 302 -10 314 233 35 47 chr20 52621103 52621189 -19532693 - MIR3 SINE MIR -31 177 93 1764 167 0 14 chr20 52621298 52621586 -19532296 + AluJo SINE Alu 11 294 -18 2060 82 34 21 chr20 52621714 52622005 -19531877 + AluSg SINE Alu 1 295 -15 215 223 75 43 chr20 52622178 52622272 -19531610 + MIR3 SINE MIR 77 173 -35 23 0 0 0 chr20 52623295 52623318 -19530564 + GC_rich Low_complexity Low_complexity 1 23 0 256 171 0 0 chr20 52623399 52623440 -19530442 - L2 LINE L2 -3 3269 3229 192 118 0 0 chr20 52623669 52623690 -19530192 + (TTCA)n Simple_repeat Simple_repeat 3 26 -10 1634 171 44 3 chr20 52623690 52623983 -19529899 - AluJo SINE Alu -7 305 1 192 118 0 0 chr20 52623983 52623995 -19529887 + (TTCA)n Simple_repeat Simple_repeat 25 36 0 207 279 122 41 chr20 52624019 52624166 -19529716 - MIR SINE MIR -1 261 103 440 225 183 26 chr20 52624318 52624509 -19529373 - Charlie8 DNA MER1_type -2140 277 57 189 267 0 33 chr20 52624914 52625004 -19528878 - L2 LINE L2 -315 2957 2871 216 0 0 0 chr20 52625103 52625127 -19528755 + (A)n Simple_repeat Simple_repeat 1 24 0 251 261 62 0 chr20 52625161 52625226 -19528656 + L2 LINE L2 3204 3272 0 1947 176 26 91 chr20 52625362 52625544 -19528338 - MLT1D LTR MaLR 0 505 313 2362 98 13 0 chr20 52625544 52625849 -19528033 + AluSx SINE Alu 2 310 -2 1947 176 26 91 chr20 52625849 52626206 -19527676 - MLT1D LTR MaLR -192 313 1 609 172 28 97 chr20 52626290 52626435 -19527447 + AluJo SINE Alu 2 136 -176 1830 158 0 35 chr20 52626443 52626753 -19527129 + AluJo SINE Alu 1 299 -13 1804 175 0 26 chr20 52626884 52627187 -19526695 - AluJo SINE Alu -11 301 7 800 112 0 0 chr20 52627250 52627357 -19526525 + AluSg/x SINE Alu 194 300 -12 2165 120 10 7 chr20 52627445 52627753 -19526129 - AluSc SINE Alu 0 309 1 2068 145 0 0 chr20 52627765 52628102 -19525780 - AluSx SINE Alu 0 337 1 877 174 0 0 chr20 52628108 52628246 -19525636 - FLAM_C SINE Alu -5 138 1 258 245 0 129 chr20 52628301 52628440 -19525442 - L1MC4a LINE L1 -1842 5966 5846 279 71 0 0 chr20 52628477 52628519 -19525363 + (TTTG)n Simple_repeat Simple_repeat 2 43 0 181 306 16 16 chr20 52628546 52628608 -19525274 - L2 LINE L2 -49 3223 3162 323 231 26 0 chr20 52628891 52628969 -19524913 + MIR SINE MIR 183 262 0 2221 114 0 0 chr20 52629026 52629315 -19524567 + AluSx SINE Alu 1 289 -23 230 376 18 0 chr20 52629530 52629639 -19524243 + L3 LINE CR1 1401 1511 -66 2046 123 7 0 chr20 52629902 52630178 -19523704 + AluSx SINE Alu 12 289 -23 2374 65 0 65 chr20 52630199 52630351 -19523531 + AluY SINE Alu 1 123 -188 2453 87 0 0 chr20 52630351 52630649 -19523233 + AluSq SINE Alu 5 302 -11 2374 65 0 65 chr20 52630649 52630818 -19523064 + AluY SINE Alu 123 301 -10 216 262 82 0 chr20 52630941 52631002 -19522880 + MIR SINE MIR 87 152 -56 2418 94 13 0 chr20 52631026 52631333 -19522549 + AluY SINE Alu 1 311 0 1907 123 26 0 chr20 52631350 52631619 -19522263 + AluSx SINE Alu 18 293 -19 245 158 145 26 chr20 52631752 52631828 -19522054 + MIR SINE MIR 86 171 -37 1994 153 30 0 chr20 52631835 52632136 -19521746 + AluJo SINE Alu 1 310 -2 1764 138 115 23 chr20 52632286 52632313 -19521569 - MER95 LTR ERV -4 427 404 2470 92 0 0 chr20 52632313 52632617 -19521265 - AluSq SINE Alu -9 304 1 1764 138 115 23 chr20 52632617 52632980 -19520902 - MER95 LTR ERV -27 404 1 1860 103 118 8 chr20 52633731 52633993 -19519889 - AluSg1 SINE Alu -18 291 1 2329 101 3 0 chr20 52634116 52634412 -19519470 - AluSx SINE Alu -15 297 1 21 36 0 0 chr20 52634416 52634444 -19519438 + AT_rich Low_complexity Low_complexity 1 28 0 2215 119 3 3 chr20 52634547 52634849 -19519033 + AluSq SINE Alu 1 302 -11 244 155 52 35 chr20 52634849 52634907 -19518975 - MLT1L LTR MaLR 0 615 557 2375 98 0 3 chr20 52635074 52635379 -19518503 + AluSg SINE Alu 2 305 -5 2220 92 32 0 chr20 52635379 52635662 -19518220 + AluSg SINE Alu 1 292 -18 236 216 0 68 chr20 52635674 52635748 -19518134 - MLT1L LTR MaLR -362 253 185 306 174 35 47 chr20 52635908 52635994 -19517888 - MIR SINE MIR -108 154 70 2289 123 0 3 chr20 52635996 52636305 -19517577 - AluSx SINE Alu -4 308 1 251 152 87 0 chr20 52636687 52636733 -19517149 + L2 LINE L2 3262 3311 -2 254 254 30 30 chr20 52636801 52636868 -19517014 + MIR SINE MIR 40 106 -102 186 247 55 82 chr20 52636862 52636935 -19516947 - L2 LINE L2 -2 3270 3200 * 1344 110 9 55 chr20 52636979 52637198 -19516684 + AluSq SINE Alu 102 310 -3 248 312 168 0 chr20 52637412 52637537 -19516345 + MIR SINE MIR 106 251 -11 196 333 95 0 chr20 52637546 52637630 -19516252 - L2 LINE L2 -786 2528 2437 299 309 138 46 chr20 52637751 52638033 -19515849 - L2 LINE L2 -151 3121 2814 220 378 76 0 chr20 52638410 52638430 -19515452 - L2 LINE L2 -6 3266 3249 2405 75 3 0 chr20 52638430 52638722 -19515160 + AluSq SINE Alu 1 293 -20 220 378 76 0 chr20 52638722 52638820 -19515062 - L2 LINE L2 -23 3249 3139 505 253 108 25 chr20 52638866 52639107 -19514775 - MIR SINE MIR 0 262 2 183 290 11 65 chr20 52639152 52639245 -19514637 - L2 LINE L2 -188 3084 2997 232 194 0 65 chr20 52639290 52639352 -19514530 - MIR3 SINE MIR 0 208 151 673 217 16 0 chr20 52639411 52639540 -19514342 + FLAM_A SINE Alu 1 131 -2 2147 130 0 3 chr20 52639540 52639832 -19514050 + AluSx SINE Alu 1 291 -21 286 122 0 0 chr20 52640278 52640319 -19513563 - MER4E LTR ERV1 -73 693 653 2494 69 7 13 chr20 52640346 52640652 -19513230 - AluY SINE Alu -7 304 1 638 155 121 0 chr20 52640656 52640772 -19513110 - FLAM_C SINE Alu -3 130 1 2108 124 0 3 chr20 52640793 52641111 -19512771 - AluSg SINE Alu 0 317 1 905 173 0 54 chr20 52641139 52641307 -19512575 - FRAM SINE Alu -17 159 1 2255 78 3 20 chr20 52641318 52641655 -19512227 - AluSp SINE Alu 0 313 1 2059 154 0 0 chr20 52641656 52641949 -19511933 - AluJb SINE Alu -19 293 1 2314 92 9 19 chr20 52644552 52644867 -19509015 + AluSx SINE Alu 1 312 0 246 296 121 15 chr20 52645052 52645184 -19508698 + MIR3 SINE MIR 45 190 -18 1945 130 27 27 chr20 52645191 52645491 -19508391 - AluSp SINE Alu -13 300 1 2357 74 0 14 chr20 52645916 52646213 -19507669 + AluSg SINE Alu 8 300 -10 344 263 18 0 chr20 52646790 52646902 -19506980 + MIR SINE MIR 38 152 -62 322 271 0 0 chr20 52646979 52647076 -19506806 - MIR SINE MIR -62 146 69 2283 107 0 13 chr20 52647153 52647461 -19506421 - AluSx SINE Alu -8 304 1 403 274 55 41 chr20 52647524 52647743 -19506139 + L2 LINE L2 2975 3196 -117 248 163 23 0 chr20 52647736 52647779 -19506103 + MIR SINE MIR 210 253 -9 * 372 88 0 0 chr20 52649397 52649454 -19504428 + (CA)n Simple_repeat Simple_repeat 1 57 0 373 200 45 18 chr20 52649614 52649661 -19504221 - MER58C DNA MER1_type -2263 157 113 2588 61 3 0 chr20 52649661 52649971 -19503911 - AluY SINE Alu 0 311 1 373 200 45 18 chr20 52649971 52650033 -19503849 - MER58C DNA MER1_type -2307 113 45 2178 97 17 13 chr20 52650038 52650336 -19503546 + AluSq SINE Alu 1 299 -14 292 262 48 39 chr20 52650685 52650788 -19503094 + MIR SINE MIR 44 147 -115 2425 104 0 0 chr20 52650948 52651255 -19502627 + AluSx SINE Alu 1 307 -5 1724 146 80 4 chr20 52651264 52651539 -19502343 + AluJb SINE Alu 1 296 -16 199 289 0 0 chr20 52652613 52652665 -19501217 + L2 LINE L2 3262 3313 0 304 292 18 26 chr20 52653112 52653225 -19500657 + MIR SINE MIR 86 197 -65 2147 100 0 28 chr20 52653318 52653607 -19500275 - AluSx SINE Alu -11 301 21 243 250 33 0 chr20 52653607 52653667 -19500215 + MER5B DNA MER1_type 113 174 -4 597 295 6 12 chr20 52653685 52653858 -19500024 + MER5B DNA MER1_type 7 178 0 214 297 143 11 chr20 52654233 52654324 -19499558 + MIR SINE MIR 31 133 -75 206 326 61 0 chr20 52654403 52654501 -19499381 + L2 LINE L2 3142 3245 -27 1334 149 31 14 chr20 52654654 52654876 -19499006 - AluJo SINE Alu 0 312 87 186 71 0 0 chr20 52654879 52654907 -19498975 + (CTTG)n Simple_repeat Simple_repeat 2 29 0 180 111 0 0 chr20 52654904 52654931 -19498951 + (TC)n Simple_repeat Simple_repeat 1 27 0 * 2152 120 14 0 chr20 52654931 52655223 -19498659 - AluSx SINE Alu -16 296 1 201 348 156 0 chr20 52655320 52655455 -19498427 - MIR3 SINE MIR -19 189 34 261 119 0 0 chr20 52656892 52656934 -19496948 + (CTG)n Simple_repeat Simple_repeat 2 43 0 2038 138 44 3 chr20 52658782 52659080 -19494802 - AluSx SINE Alu -2 310 1 476 343 49 5 chr20 52659602 52659806 -19494076 - MIR SINE MIR -11 251 39 200 286 18 0 chr20 52659820 52659876 -19494006 + MIR3 SINE MIR 114 170 -38 1763 148 26 22 chr20 52660611 52660922 -19492960 - AluJo SINE Alu 0 312 1 1454 155 0 17 chr20 52660955 52661194 -19492688 - AluJo SINE Alu -77 235 1 2123 120 0 0 chr20 52661222 52661521 -19492361 + AluSq SINE Alu 1 299 -14 242 167 74 0 chr20 52661672 52661726 -19492156 - MER20B DNA MER1_type -662 121 64 2270 79 7 20 chr20 52661741 52662045 -19491837 - AluSg SINE Alu -9 301 2 182 319 213 0 chr20 52662445 52662539 -19491343 - MIR SINE MIR -79 129 16 693 208 84 7 chr20 52662695 52662849 -19491033 + MIR SINE MIR 4 169 -93 422 211 128 0 chr20 52664530 52664639 -19489243 - L2 LINE L2 -218 3054 2932 2431 52 13 3 chr20 52665406 52665714 -19488168 - AluY SINE Alu 0 311 1 1695 187 3 3 chr20 52665828 52666138 -19487744 - AluJo SINE Alu -2 310 1 633 243 29 23 chr20 52666166 52666339 -19487543 - MIR SINE MIR -42 220 47 250 345 36 9 chr20 52666334 52666373 -19487509 - MIR SINE MIR -48 214 178 * 961 155 160 6 chr20 52666373 52666554 -19487328 + MER3 DNA MER1_type 1 209 0 250 345 36 9 chr20 52666554 52666624 -19487258 - MIR SINE MIR -84 178 102 1949 145 13 0 chr20 52666625 52666929 -19486953 + AluJo SINE Alu 1 308 -4 2158 118 10 0 chr20 52666929 52667234 -19486648 + AluSq SINE Alu 1 308 -5 202 250 79 13 chr20 52667295 52667371 -19486511 + MIR SINE MIR 54 134 -128 1773 123 75 0 chr20 52668219 52668487 -19485395 - AluSg SINE Alu -18 292 5 1662 145 12 89 chr20 52668502 52668839 -19485043 - AluJb SINE Alu -1 311 1 321 320 20 0 chr20 52668907 52669007 -19484875 - MIR SINE MIR -24 238 137 689 115 9 62 chr20 52669053 52669166 -19484716 + AluSg/x SINE Alu 184 290 -19 776 189 0 8 chr20 52669180 52669307 -19484575 - FLAM_C SINE Alu -16 127 2 563 244 8 0 chr20 52669309 52669436 -19484446 - MIR SINE MIR -114 148 21 1759 163 7 7 chr20 52669492 52669793 -19484089 + AluJb SINE Alu 2 302 -10 222 222 19 0 chr20 52670635 52670689 -19483193 - L2 LINE L2 -213 3059 3005 614 236 83 50 chr20 52670717 52670916 -19482966 - MIR SINE MIR -11 251 41 926 128 0 8 chr20 52670916 52671049 -19482833 - FLAM_C SINE Alu 0 133 2 614 236 83 50 chr20 52671049 52671090 -19482792 - MIR SINE MIR -221 41 3 509 259 22 0 chr20 52671113 52671248 -19482634 + MIR SINE MIR 69 206 -56 582 240 104 11 chr20 52671680 52671863 -19482019 + MIR SINE MIR 63 262 0 2301 88 0 3 chr20 52671917 52672224 -19481658 + AluSx SINE Alu 1 306 -6 2106 98 6 29 chr20 52672356 52672672 -19481210 + AluSc SINE Alu 1 309 0 280 266 97 52 chr20 52672761 52672915 -19480967 - MIR SINE MIR -55 207 47 23 24 0 24 chr20 52673812 52673827 -19480055 + AT_rich Low_complexity Low_complexity 1 15 -25 2052 116 0 7 chr20 52673827 52674121 -19479761 + AluSx SINE Alu 1 292 -20 23 24 0 24 chr20 52674121 52674146 -19479736 + AT_rich Low_complexity Low_complexity 15 40 0 656 285 76 60 chr20 52674221 52674272 -19479610 - MIR SINE MIR -3 259 210 2326 87 0 0 chr20 52674272 52674572 -19479310 - AluSc SINE Alu -9 300 1 656 285 76 60 chr20 52674572 52674769 -19479113 - MIR SINE MIR -52 210 7 263 346 29 10 chr20 52675093 52675197 -19478685 - MIR SINE MIR -77 185 80 2221 86 3 10 chr20 52675641 52675943 -19477939 + AluSx SINE Alu 2 301 -11 285 234 42 13 chr20 52676865 52676961 -19476921 - MIR3 SINE MIR -33 175 95 334 276 16 39 chr20 52677720 52677847 -19476035 + MIR SINE MIR 47 170 -92 2441 54 0 6 chr20 52678107 52678420 -19475462 - AluY SINE Alu 0 311 1 225 94 0 0 chr20 52678468 52678500 -19475382 + (CCCCCA)n Simple_repeat Simple_repeat 1 32 0 269 186 0 0 chr20 52678644 52678687 -19475195 - MER81 DNA DNA -1 113 71 24 0 0 0 chr20 52678740 52678764 -19475118 + AT_rich Low_complexity Low_complexity 1 24 0 1982 128 3 0 chr20 52678764 52679052 -19474830 - AluSx SINE Alu -23 289 1 197 0 71 0 chr20 52679052 52679080 -19474802 + (TTTA)n Simple_repeat Simple_repeat 1 30 0 2146 92 0 3 chr20 52679080 52679363 -19474519 - AluSq SINE Alu -31 282 1 1887 125 3 17 chr20 52679368 52679655 -19474227 - AluJb SINE Alu -18 294 12 207 299 52 13 chr20 52679741 52679818 -19474064 - MIR SINE MIR -67 195 116 397 309 175 5 chr20 52679878 52680095 -19473787 + MIR SINE MIR 5 258 -4 2246 101 10 0 chr20 52680271 52680579 -19473303 - AluSx SINE Alu -1 311 1 912 183 110 133 chr20 52680616 52680751 -19473131 - AluJo SINE Alu -8 294 157 1797 166 0 3 chr20 52680751 52681041 -19472841 - AluJb SINE Alu 0 312 24 912 183 110 133 chr20 52681041 52681070 -19472812 - AluJo SINE Alu -145 157 129 1959 97 80 3 chr20 52681070 52681358 -19472524 - AluSg SINE Alu 0 310 1 912 183 110 133 chr20 52681358 52681493 -19472389 - AluJo SINE Alu -173 129 1 750 208 6 6 chr20 52681653 52681812 -19472070 + MIR SINE MIR 94 252 -10 1044 237 170 15 chr20 52681836 52682082 -19471800 + L2 LINE L2 2741 2948 -365 2082 120 7 0 chr20 52682082 52682383 -19471499 - AluSx SINE Alu -8 304 2 1044 237 170 15 chr20 52682383 52682629 -19471253 + L2 LINE L2 2948 3312 -1 2109 117 3 0 chr20 52682749 52683047 -19470835 + AluSq SINE Alu 1 299 -14 1750 168 0 23 chr20 52683313 52683623 -19470259 - AluJo SINE Alu -9 303 1 581 235 23 0 chr20 52683847 52683979 -19469903 - MER58B DNA MER1_type -5 336 202 267 235 0 0 chr20 52683972 52684023 -19469859 - MER58B DNA MER1_type -290 51 1 * 1007 145 6 6 chr20 52684053 52684212 -19469670 + FRAM SINE Alu 1 159 -17 382 225 25 42 chr20 52684214 52684334 -19469548 + MIR SINE MIR 109 226 -36 732 142 0 0 chr20 52684350 52684456 -19469426 - FLAM_C SINE Alu -36 107 2 1707 175 0 10 chr20 52684507 52684798 -19469084 - AluJo SINE Alu -24 288 1 423 228 41 55 chr20 52684801 52684946 -19468936 - MIR SINE MIR -50 212 70 397 283 28 0 chr20 52684973 52685079 -19468803 - MIR SINE MIR -65 197 89 778 272 62 43 chr20 52686429 52686587 -19467295 + L2 LINE L2 2375 2529 -743 1887 137 18 0 chr20 52686587 52686864 -19467018 + AluJb SINE Alu 16 297 -15 778 272 62 43 chr20 52686864 52687473 -19466409 + L2 LINE L2 2529 3264 -8 2262 100 0 0 chr20 52687480 52687779 -19466103 + AluSg SINE Alu 1 299 -11 2062 101 0 11 chr20 52688111 52688397 -19465485 + AluSx SINE Alu 14 296 -16 1941 230 54 6 chr20 52688397 52688880 -19465002 + L1ME1 LINE L1 5595 6100 -66 1991 98 22 0 chr20 52688884 52689191 -19464691 - AluSg SINE Alu 0 313 1 749 171 62 8 chr20 52689201 52689330 -19464552 - AluJo SINE Alu -175 137 2 950 84 70 0 chr20 52689340 52689507 -19464375 - AluSq SINE Alu 0 310 134 1946 122 7 0 chr20 52689507 52689793 -19464089 - AluSp SINE Alu -9 304 17 305 238 0 0 chr20 52689795 52689858 -19464024 + L1MB7 LINE L1 6113 6175 -9 2017 122 7 0 chr20 52690116 52690404 -19463478 + AluSc SINE Alu 1 290 -19 303 339 128 24 chr20 52690553 52690889 -19462993 + L2 LINE L2 2853 3223 -49 1916 144 0 0 chr20 52691433 52691724 -19462158 + AluSx SINE Alu 1 291 -21 518 208 20 0 chr20 52691728 52691829 -19462053 - MER45A DNA AcHobo -21 157 55 1498 155 74 30 chr20 52691841 52692137 -19461745 - AluJo SINE Alu -1 311 3 1989 136 0 3 chr20 52692432 52692733 -19461149 + AluSx SINE Alu 1 300 -12 592 283 115 62 chr20 52692779 52693080 -19460802 - L2 LINE L2 -5 3267 2938 1372 180 88 27 chr20 52693080 52693374 -19460508 + AluJb SINE Alu 1 312 0 592 283 115 62 chr20 52693374 52693472 -19460410 - L2 LINE L2 -334 2938 2847 356 357 11 16 chr20 52693565 52693750 -19460132 - L2 LINE L2 -510 2804 2621 738 173 23 23 chr20 52693758 52693891 -19459991 + FLAM_C SINE Alu 1 133 0 1908 146 10 0 chr20 52693901 52694195 -19459687 + AluSx SINE Alu 1 297 -15 2268 98 0 0 chr20 52694195 52694501 -19459381 + AluSx SINE Alu 1 307 -5 748 256 79 74 chr20 52694548 52694949 -19458933 + L1ME3A LINE L1 5745 6148 -17 2194 105 3 7 chr20 52694949 52695253 -19458629 - AluSg SINE Alu -7 303 1 1934 145 0 3 chr20 52695266 52695556 -19458326 - AluJb SINE Alu -23 289 1 1355 142 78 34 chr20 52695559 52695827 -19458055 - AluJo SINE Alu -27 285 6 2048 107 3 20 chr20 52695843 52696143 -19457739 - AluSc SINE Alu -14 295 1 714 217 46 51 chr20 52696162 52696185 -19457697 + AluJo SINE Alu 118 140 -172 1826 84 0 84 chr20 52696185 52696471 -19457411 + AluSx SINE Alu 37 298 -14 714 217 46 51 chr20 52696471 52696622 -19457260 + AluJo SINE Alu 140 291 -21 2173 108 0 0 chr20 52696686 52696982 -19456900 - AluSq SINE Alu -17 296 1 2356 72 3 0 chr20 52697103 52697408 -19456474 + AluSp SINE Alu 1 306 -7 230 298 14 83 chr20 52697490 52697651 -19456231 + MIR SINE MIR 5 153 -62 2262 68 0 10 chr20 52697775 52698070 -19455812 + AluSg SINE Alu 1 292 -18 2179 76 0 3 chr20 52698197 52698488 -19455394 - AluSx SINE Alu -22 290 1 558 323 78 0 chr20 52698745 52698962 -19454920 - MIR SINE MIR -17 245 12 30 27 0 0 chr20 52700392 52700429 -19453453 + GC_rich Low_complexity Low_complexity 1 37 0 23 0 0 0 chr20 52700441 52700464 -19453418 + GC_rich Low_complexity Low_complexity 1 23 0 233 243 35 125 chr20 52701051 52701195 -19452687 + MER5A DNA MER1_type 59 189 0 2296 68 0 46 chr20 52701472 52701798 -19452084 - AluY SINE Alu 0 311 1 1082 153 81 59 chr20 52701798 52701958 -19451924 - AluJo SINE Alu -15 297 129 1837 143 16 3 chr20 52701958 52702265 -19451617 + AluSx SINE Alu 1 311 -1 1082 153 81 59 chr20 52702265 52702326 -19451556 - AluJo SINE Alu -183 129 71 927 201 6 12 chr20 52702380 52702549 -19451333 - MER45A DNA AcHobo 0 178 11 410 268 136 57 chr20 52703820 52704100 -19449782 - L2 LINE L2 -28 3244 2943 513 294 7 7 chr20 52704703 52704846 -19449036 - L2 LINE L2 -9 3263 3121 186 347 82 10 chr20 52704832 52704930 -19448952 - L2 LINE L2 -12 3260 3156 * 281 341 78 0 chr20 52705223 52705352 -19448530 - MIR SINE MIR -115 147 9 373 330 99 27 chr20 52705460 52705681 -19448201 - MIR SINE MIR -6 256 20 453 157 0 0 chr20 52706617 52706687 -19447195 + AluJ/FRAM SINE Alu 225 294 -18 1875 131 3 22 chr20 52706753 52707067 -19446815 - AluSg SINE Alu -2 308 1 839 150 0 0 chr20 52707069 52707196 -19446686 - AluJo/FLAM SINE Alu -175 127 1 2438 64 0 10 chr20 52707271 52707583 -19446299 - AluSc SINE Alu 0 309 1 2179 118 0 0 chr20 52707619 52707924 -19445958 - AluSp SINE Alu -8 305 1 1505 154 64 57 chr20 52707924 52708222 -19445660 - AluJb SINE Alu -12 300 1 207 290 72 0 chr20 52709105 52709174 -19444708 + L2 LINE L2 3007 3080 -192 195 344 94 10 chr20 52709773 52709869 -19444013 + L2 LINE L2 3129 3232 -40 540 316 61 4 chr20 52709889 52710120 -19443762 - MIR SINE MIR -7 255 12 315 272 0 19 chr20 52711766 52711869 -19442013 + MIR SINE MIR 29 129 -133 2178 75 10 7 chr20 52716207 52716501 -19437381 - AluSp SINE Alu -18 295 1 1765 188 36 12 chr20 52716753 52717082 -19436800 - MER1B DNA MER1_type 0 337 1 208 282 40 117 chr20 52717163 52717411 -19436471 + L2 LINE L2 3044 3272 0 379 246 98 33 chr20 52718637 52718759 -19435123 + MIR SINE MIR 18 147 -61 813 233 47 0 chr20 52719474 52719667 -19434215 + MER20 DNA MER1_type 18 219 0 426 340 141 38 chr20 52719851 52720080 -19433802 + L1ME4a LINE L1 5174 5378 -743 1839 117 62 0 chr20 52720080 52720353 -19433529 - AluJb SINE Alu -7 305 16 426 340 141 38 chr20 52720353 52720378 -19433504 + L1ME4a LINE L1 5378 5399 -722 2184 86 13 16 chr20 52720378 52720682 -19433200 + AluY SINE Alu 1 303 -8 426 340 141 38 chr20 52720682 52720846 -19433036 + L1ME4a LINE L1 5399 5545 -576 2051 131 0 3 chr20 52720846 52721143 -19432739 + AluSx SINE Alu 1 296 -16 426 340 141 38 chr20 52721143 52721529 -19432353 + L1ME4a LINE L1 5545 6080 -41 2271 91 10 0 chr20 52721529 52721837 -19432045 - AluSp SINE Alu -2 311 1 426 340 141 38 chr20 52721837 52721881 -19432001 + L1ME4a LINE L1 6080 6118 -3 323 280 83 32 chr20 52722028 52722246 -19431636 + L1M4 LINE L1 4939 5167 -979 250 283 50 20 chr20 52722754 52722853 -19431029 + L2 LINE L2 3132 3233 -39 496 333 9 40 chr20 52723289 52723360 -19430522 - MIR SINE MIR -27 235 163 1953 135 14 0 chr20 52723360 52723656 -19430226 - AluSx SINE Alu -12 300 1 496 333 9 40 chr20 52723656 52723812 -19430070 - MIR SINE MIR -99 163 15 1064 261 77 70 chr20 52723857 52724339 -19429543 + MLT1J LTR MaLR 2 486 -25 284 348 96 0 chr20 52725216 52725351 -19428531 - MIR SINE MIR -68 194 47 1280 152 4 59 chr20 52726461 52726698 -19427184 + AluJb SINE Alu 57 280 -32 24 32 0 0 chr20 52726797 52726828 -19427054 + AT_rich Low_complexity Low_complexity 1 31 0 211 293 0 71 chr20 52727959 52728058 -19425824 + MIR SINE MIR 117 208 -54 387 220 48 143 chr20 52728059 52728111 -19425771 - MER91B DNA MER1_type 0 190 135 2299 103 3 0 chr20 52728111 52728422 -19425460 - AluSp SINE Alu -1 312 1 387 220 48 143 chr20 52728422 52728578 -19425304 - MER91B DNA MER1_type -55 135 2 383 331 0 8 chr20 52729527 52729660 -19424222 + MIR SINE MIR 16 147 -61 455 191 61 76 chr20 52729900 52730031 -19423851 + L1ME3A LINE L1 6035 6163 -7 1898 120 33 0 chr20 52730064 52730380 -19423502 + AluSq SINE Alu 1 325 0 280 281 122 55 chr20 52730428 52730592 -19423290 - MIR SINE MIR -73 189 15 399 267 29 0 chr20 52731293 52731398 -19422484 - MER91B DNA MER1_type -5 185 78 556 202 40 0 chr20 52731412 52731536 -19422346 + MER33 DNA MER1_type 1 129 -195 1012 84 8 0 chr20 52731556 52731687 -19422195 - AluY SINE Alu -179 132 1 704 188 0 0 chr20 52731736 52731848 -19422034 + AluJo SINE Alu 2 113 -199 2291 99 0 6 chr20 52731848 52732161 -19421721 - AluSx SINE Alu 0 312 2 1320 142 75 0 chr20 52732162 52732374 -19421508 - AluJb SINE Alu 0 312 85 883 214 6 0 chr20 52732374 52732547 -19421335 + AluJo SINE Alu 104 277 -35 245 212 15 45 chr20 52732587 52732653 -19421229 - MER91B DNA MER1_type -126 64 1 813 180 5 2 chr20 52734107 52734325 -19419557 + AluJo SINE Alu 14 269 -43 722 267 50 5 chr20 52734325 52734546 -19419336 + MIR SINE MIR 32 262 0 390 258 150 18 chr20 52734543 52734710 -19419172 - MIR SINE MIR -13 249 61 * 670 297 52 44 chr20 52735263 52735616 -19418266 + L2 LINE L2 2920 3271 -1 973 216 20 20 chr20 52735696 52735900 -19417982 - MIR SINE MIR 0 262 59 953 98 8 8 chr20 52736068 52736201 -19417681 - FLAM_C SINE Alu 0 133 1 375 323 32 0 chr20 52736288 52736412 -19417470 + MIR SINE MIR 111 238 -24 226 271 17 0 chr20 52738016 52738075 -19415807 - MIR SINE MIR -64 144 85 1874 138 0 30 chr20 52738189 52738494 -19415388 + AluJb SINE Alu 1 296 -16 2022 103 7 7 chr20 52738753 52739053 -19414829 + AluSp SINE Alu 1 300 -13 1780 111 80 3 chr20 52739090 52739379 -19414503 + AluSq SINE Alu 3 313 0 552 174 0 20 chr20 52739800 52739898 -19413984 + FRAM SINE Alu 69 164 -12 364 172 0 0 chr20 52740200 52740264 -19413618 - FLAM SINE Alu -7 126 63 34 0 0 0 chr20 52740808 52740842 -19413040 + AT_rich Low_complexity Low_complexity 1 34 0 1733 139 15 11 chr20 52740842 52741108 -19412774 - AluSx SINE Alu -45 267 1 358 250 24 25 chr20 52741611 52741762 -19412120 - MIR SINE MIR -65 143 19 1888 116 46 16 chr20 52741762 52742065 -19411817 + AluSx SINE Alu 1 312 0 672 246 73 42 chr20 52742078 52742269 -19411613 - MIR SINE MIR -26 236 40 2156 95 3 7 chr20 52742272 52742566 -19411316 + AluSp SINE Alu 1 293 -20 301 288 79 75 chr20 52744673 52744951 -19408931 - L1MCa LINE L1 -4981 1445 1167 24 32 0 0 chr20 52745185 52745216 -19408666 + AT_rich Low_complexity Low_complexity 1 31 0 182 300 0 20 chr20 52745218 52745268 -19408614 - MIR SINE MIR -208 54 6 427 231 0 60 chr20 52745335 52745452 -19408430 - MIR SINE MIR -58 150 41 2308 71 0 7 chr20 52745488 52745785 -19408097 - AluSg SINE Alu -15 295 1 1128 192 0 14 chr20 52745794 52746043 -19407839 - AluJb SINE Alu 0 330 85 1286 139 9 19 chr20 52746102 52746318 -19407564 - AluJb SINE Alu -14 298 85 1973 112 31 0 chr20 52746318 52746605 -19407277 - AluSx SINE Alu -16 296 1 414 237 56 22 chr20 52746628 52746784 -19407098 - MIR SINE MIR -63 145 20 2218 113 3 0 chr20 52747105 52747416 -19406466 + AluSx SINE Alu 1 312 0 236 266 32 43 chr20 52747563 52747657 -19406225 + L2 LINE L2 3220 3312 -1 196 171 0 0 chr20 52747665 52747700 -19406182 - MIR SINE MIR -61 147 113 1613 155 10 41 chr20 52747767 52748058 -19405824 + AluJo SINE Alu 1 282 -30 1486 216 52 65 chr20 52748093 52748570 -19405312 - LTR33A LTR ERVL -49 474 4 209 253 108 36 chr20 52748693 52748776 -19405106 + L2 LINE L2 3019 3107 -165 206 133 0 0 chr20 52748977 52749007 -19404875 + MIR SINE MIR 117 146 -116 398 262 257 15 chr20 52749033 52749239 -19404643 + MIR SINE MIR 7 262 0 297 139 0 0 chr20 52749304 52749371 -19404511 - AluSp/q SINE Alu 0 307 241 826 149 29 69 chr20 52749371 52749546 -19404336 - AluJo SINE Alu -144 168 1 358 253 0 0 chr20 52749547 52749630 -19404252 + L2 LINE L2 3176 3258 -14 1300 205 17 37 chr20 52749633 52749791 -19404091 - AluJb SINE Alu -21 291 140 2720 16 0 0 chr20 52749791 52750100 -19403782 - AluY SINE Alu -2 309 1 1300 205 17 37 chr20 52750100 52750238 -19403644 - AluJb SINE Alu -172 140 1 570 287 97 9 chr20 52750514 52750730 -19403152 - MIR SINE MIR -8 254 20 1268 154 221 32 chr20 52750735 52750988 -19402894 - AluSx SINE Alu -1 301 1 205 269 0 0 chr20 52751026 52751078 -19402804 + GA-rich Low_complexity Low_complexity 5 56 0 373 313 95 20 chr20 52751314 52751600 -19402282 + MIR SINE MIR 35 245 -17 334 273 35 146 chr20 52751584 52751662 -19402220 + MIR SINE MIR 12 97 -165 * 1064 84 22 17 chr20 52751662 52751841 -19402041 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1802 137 0 35 chr20 52751844 52752159 -19401723 - AluSx SINE Alu -7 305 2 334 273 35 146 chr20 52752159 52752336 -19401546 + MIR SINE MIR 99 242 -20 615 302 42 5 chr20 52752363 52752575 -19401307 - MIR SINE MIR -2 260 41 1450 127 88 46 chr20 52753034 52753317 -19400565 + AluJo SINE Alu 1 295 -17 767 87 0 10 chr20 52753340 52753443 -19400439 + AluSq/x SINE Alu 2 103 -209 1943 143 0 3 chr20 52753473 52753773 -19400109 - AluSx SINE Alu -13 299 1 284 248 32 10 chr20 52753780 52753896 -19399986 - L1MB5 LINE L1 -76 6108 5986 1917 152 0 13 chr20 52753902 52754218 -19399664 - AluSx SINE Alu 0 312 1 1164 113 0 6 chr20 52754251 52754419 -19399463 - FRAM SINE Alu -14 162 1 2057 118 11 0 chr20 52754498 52754785 -19399097 + AluSx SINE Alu 1 290 -22 196 360 90 9 chr20 52754856 52754967 -19398915 + L2 LINE L2 3185 3304 -9 512 308 35 8 chr20 52755002 52755262 -19398620 - L1M4 LINE L1 -1091 5055 4789 191 281 0 18 chr20 52755262 52755319 -19398563 - MER5A DNA MER1_type -113 76 21 232 83 56 0 chr20 52755274 52755310 -19398572 + MER5B DNA MER1_type 125 162 -16 2147 91 3 0 chr20 52755524 52755809 -19398073 - AluSp SINE Alu -11 302 17 471 169 0 100 chr20 52755877 52755967 -19397915 - L1ME3A LINE L1 -8 6162 6087 1354 177 119 86 chr20 52755967 52756237 -19397645 - MLT1C LTR MaLR 0 467 175 2252 109 0 0 chr20 52756237 52756549 -19397333 - AluSx SINE Alu 0 312 1 1354 177 119 86 chr20 52756549 52756730 -19397152 - MLT1C LTR MaLR -292 175 1 471 169 0 100 chr20 52756730 52756769 -19397113 - L1ME3A LINE L1 -83 6087 6046 1038 152 12 0 chr20 52756772 52756943 -19396939 + FRAM SINE Alu 1 173 -3 1647 185 30 7 chr20 52757042 52757344 -19396538 - AluJo SINE Alu -3 309 1 616 248 84 75 chr20 52757348 52757646 -19396236 - L1MC4 LINE L1 0 8042 7737 1982 117 26 13 chr20 52757646 52757954 -19395928 + AluSx SINE Alu 1 312 0 616 248 84 75 chr20 52757954 52758071 -19395811 - L1MC4 LINE L1 -305 7737 7623 180 0 0 0 chr20 52758092 52758112 -19395770 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 1904 128 4 0 chr20 52758115 52758389 -19395493 - AluSx SINE Alu -37 275 1 682 177 0 57 chr20 52758439 52758580 -19395302 + FLAM_A SINE Alu 1 133 0 479 126 0 23 chr20 52758587 52758674 -19395208 + (GGAGA)n Simple_repeat Simple_repeat 5 89 0 202 347 20 0 chr20 52759124 52759222 -19394660 + L2 LINE L2 2958 3057 -215 1162 210 30 0 chr20 52759259 52759492 -19394390 + MIR SINE MIR 23 262 0 1631 123 0 175 chr20 52759494 52759714 -19394168 - AluSx SINE Alu -1 301 169 2347 63 3 3 chr20 52759714 52760013 -19393869 - AluSp SINE Alu -14 299 1 1631 123 0 175 chr20 52760013 52760157 -19393725 - AluSx SINE Alu -133 169 1 946 185 17 11 chr20 52760175 52760353 -19393529 + AluJo SINE Alu 120 298 -14 384 302 17 134 chr20 52760356 52760714 -19393168 - L2 LINE L2 -61 3211 2896 382 319 87 14 chr20 52760790 52760928 -19392954 + L2 LINE L2 3123 3270 -2 693 92 0 0 chr20 52761201 52761299 -19392583 + (TTCC)n Simple_repeat Simple_repeat 3 100 0 2205 89 7 0 chr20 52761299 52761581 -19392301 - AluSx SINE Alu -27 285 2 2184 77 26 32 chr20 52761583 52761893 -19391989 - AluSx SINE Alu -4 308 1 1725 170 0 48 chr20 52761897 52762208 -19391674 - AluJb SINE Alu -16 296 1 621 209 133 0 chr20 52762218 52762376 -19391506 - MER5A DNA MER1_type -7 182 4 201 375 0 0 chr20 52762440 52762512 -19391370 - L2 LINE L2 -493 2821 2750 2580 129 13 8 chr20 52762614 52763000 -19390882 + MLT1B LTR MaLR 1 388 -2 321 313 15 8 chr20 52763306 52763437 -19390445 - LTR67 LTR ERVL 0 557 426 612 258 141 52 chr20 52763675 52763981 -19389901 + MLT1H1 LTR MaLR 3 335 -220 947 100 0 8 chr20 52763996 52764126 -19389756 - FLAM_C SINE Alu -9 134 6 2503 185 21 37 chr20 52764138 52764712 -19389170 - MER74B LTR ERVL 0 622 58 1847 158 0 10 chr20 52764712 52765016 -19388866 + AluJo SINE Alu 1 301 -11 606 254 45 32 chr20 52765030 52765250 -19388632 + MLT1H1 LTR MaLR 332 554 -1 414 229 77 16 chr20 52765351 52765504 -19388378 - MIR SINE MIR -35 173 1 671 237 23 45 chr20 52766435 52766612 -19387270 + MER5B DNA MER1_type 6 178 0 1820 134 54 0 chr20 52766794 52767071 -19386811 + AluJb SINE Alu 1 292 -20 361 319 35 30 chr20 52767232 52767401 -19386481 + MIR SINE MIR 5 174 -88 745 166 50 61 chr20 52767424 52767456 -19386426 - MER5A DNA MER1_type -10 179 148 2085 148 0 0 chr20 52767456 52767760 -19386122 + AluSx SINE Alu 1 304 -8 2223 78 0 3 chr20 52767761 52768067 -19385815 + AluSg SINE Alu 1 305 0 745 166 50 61 chr20 52768067 52768212 -19385670 - MER5A DNA MER1_type -40 149 1 2137 109 0 29 chr20 52768629 52768942 -19384940 - AluSx SINE Alu -8 304 1 1870 146 7 13 chr20 52769149 52769457 -19384425 + AluJb SINE Alu 1 306 -6 347 240 102 20 chr20 52769683 52769813 -19384069 + MIR SINE MIR 23 120 -88 189 0 0 0 chr20 52769839 52769860 -19384022 + (TG)n Simple_repeat Simple_repeat 2 22 0 835 271 9 14 chr20 52769861 52770079 -19383803 - MIR SINE MIR -25 237 21 1006 226 45 5 chr20 52770903 52771148 -19382734 - MIR SINE MIR -5 257 5 242 234 28 23 chr20 52771137 52771241 -19382641 + MIR SINE MIR 105 208 0 * 280 369 20 13 chr20 52771228 52771377 -19382505 + L2 LINE L2 3161 3310 -3 882 119 0 62 chr20 52771468 52771628 -19382254 + MER20 DNA MER1_type 12 161 -58 674 289 45 20 chr20 52772016 52772262 -19381620 + MIR SINE MIR 11 262 0 402 228 0 11 chr20 52772269 52772361 -19381521 - MIR SINE MIR -150 112 22 185 97 65 0 chr20 52772451 52772482 -19381400 + L2 LINE L2 3263 3295 -18 2085 114 7 7 chr20 52772492 52772799 -19381083 + AluSx SINE Alu 1 307 -5 301 326 75 27 chr20 52772991 52773138 -19380744 - MIR3 SINE MIR -23 185 32 838 216 12 35 chr20 52773149 52773320 -19380562 - AluJb SINE Alu -24 288 122 363 325 53 30 chr20 52773339 52773508 -19380374 - MIR SINE MIR -3 259 87 423 0 0 0 chr20 52774082 52774129 -19379753 + (CA)n Simple_repeat Simple_repeat 1 47 0 1363 182 4 9 chr20 52774815 52775046 -19378836 + AluJo SINE Alu 2 231 -81 210 335 115 31 chr20 52775484 52775675 -19378207 + MIR SINE MIR 44 250 -12 350 301 22 7 chr20 52776071 52776207 -19377675 - MER91A DNA MER1_type -57 139 2 450 162 90 27 chr20 52776677 52776788 -19377094 + MIR3 SINE MIR 48 165 -43 1725 141 34 13 chr20 52778122 52778420 -19375462 + AluJo SINE Alu 3 306 -6 232 298 240 0 chr20 52779167 52779288 -19374594 - MER91A DNA MER1_type -3 193 44 25 51 0 0 chr20 52779588 52779627 -19374255 + GC_rich Low_complexity Low_complexity 1 39 0 279 308 19 29 chr20 52779909 52780013 -19373869 - MIR SINE MIR -90 118 16 232 259 19 0 chr20 52780047 52780101 -19373781 - L2 LINE L2 -2 3311 3257 346 179 12 60 chr20 52780118 52780202 -19373680 + MIR SINE MIR 72 151 -111 993 326 94 13 chr20 52780459 52780748 -19373134 + L2 LINE L2 2810 3153 -160 2490 61 0 6 chr20 52780748 52781060 -19372822 - AluSg SINE Alu 0 310 1 993 326 94 13 chr20 52781060 52781236 -19372646 + L2 LINE L2 3153 3313 0 237 258 0 15 chr20 52781300 52781366 -19372516 - L2 LINE L2 -1 3312 3248 234 128 0 0 chr20 52781882 52781921 -19371961 + (TATG)n Simple_repeat Simple_repeat 2 40 0 1960 68 30 19 chr20 52782005 52782270 -19371612 + AluY SINE Alu 1 268 -43 638 52 0 0 chr20 52782270 52782347 -19371535 + AluSg/x SINE Alu 217 293 -16 227 281 90 22 chr20 52782350 52782439 -19371443 - MIR SINE MIR -44 218 124 388 235 0 0 chr20 52782450 52782535 -19371347 - L2 LINE L2 -1 3312 3228 256 269 39 13 chr20 52782529 52782607 -19371275 - MER5A DNA MER1_type -9 180 101 * 189 147 0 0 chr20 52782695 52782729 -19371153 + (TG)n Simple_repeat Simple_repeat 2 35 0 339 263 35 2 chr20 52782890 52783012 -19370870 + L1MC/D LINE L1 5665 5786 -392 543 244 6 85 chr20 52783043 52783254 -19370628 - MIR SINE MIR -28 234 41 1532 295 110 31 chr20 52783545 52784351 -19369531 + L2 LINE L2 1598 2467 -847 382 125 69 0 chr20 52784390 52784462 -19369420 - MER20 DNA MER1_type -2 217 141 580 219 8 0 chr20 52784658 52784777 -19369105 - MER20 DNA MER1_type -99 120 1 1983 189 67 73 chr20 52784781 52784883 -19368999 - L1ME3A LINE L1 -18 6152 6051 2021 138 10 10 chr20 52784883 52785195 -19368687 + AluSx SINE Alu 1 312 0 1983 189 67 73 chr20 52785195 52785287 -19368595 - L1ME3A LINE L1 -119 6051 5960 1934 111 0 0 chr20 52785287 52785549 -19368333 - AluSg1 SINE Alu -45 264 3 1983 189 67 73 chr20 52785549 52785982 -19367900 - L1ME3A LINE L1 -210 5960 5528 1331 285 122 6 chr20 52785989 52786747 -19367135 + L2 LINE L2 2454 3299 -14 234 0 0 0 chr20 52786749 52786775 -19367107 + (TGAA)n Simple_repeat Simple_repeat 2 27 0 22 56 0 0 chr20 52786939 52786975 -19366907 + GC_rich Low_complexity Low_complexity 1 36 0 219 247 10 41 chr20 52787209 52787306 -19366576 + (CGGGG)n Simple_repeat Simple_repeat 1 94 0 714 55 0 0 chr20 52788253 52788344 -19365538 + (GGA)n Simple_repeat Simple_repeat 1 91 0 257 275 14 14 chr20 52788419 52788488 -19365394 - MIR3 SINE MIR -27 181 113 385 363 100 25 chr20 52788573 52789210 -19364672 + L2 LINE L2 2387 3266 -6 261 0 0 0 chr20 52789451 52789480 -19364402 + (TG)n Simple_repeat Simple_repeat 2 30 0 540 315 65 5 chr20 52790309 52790493 -19363389 + MIR3 SINE MIR 12 206 -2 211 200 67 0 chr20 52790532 52790577 -19363305 + MIR SINE MIR 106 153 -109 207 245 0 20 chr20 52790761 52790810 -19363072 + C-rich Low_complexity Low_complexity 4 51 0 300 368 75 17 chr20 52791323 52791497 -19362385 + MIR3 SINE MIR 10 193 -15 369 288 34 40 chr20 52791935 52792112 -19361770 - MIR3 SINE MIR 0 208 33 261 0 0 0 chr20 52792938 52792967 -19360915 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 444 286 16 8 chr20 52793067 52793193 -19360689 + MIR SINE MIR 21 147 -61 600 84 0 0 chr20 52795168 52795251 -19358631 + (TG)n Simple_repeat Simple_repeat 2 84 0 529 261 90 37 chr20 52797854 52798042 -19355840 - MIR SINE MIR -53 209 12 868 319 91 48 chr20 52798771 52799821 -19354061 + L2 LINE L2 2167 3272 0 255 362 126 0 chr20 52800047 52800174 -19353708 - MIR SINE MIR -11 251 109 202 338 7 32 chr20 52800858 52801012 -19352870 + GA-rich Low_complexity Low_complexity 1 150 0 421 311 24 55 chr20 52801629 52801860 -19352022 - MIR SINE MIR -30 232 15 267 363 15 37 chr20 52802734 52802869 -19351013 - L2 LINE L2 -2 3270 3139 471 260 133 33 chr20 52802893 52803074 -19350808 - MIR SINE MIR -4 258 60 322 333 59 26 chr20 52803396 52803495 -19350387 - MIR SINE MIR -6 256 148 1577 145 57 21 chr20 52803495 52803798 -19350084 - AluJb SINE Alu 0 313 1 322 333 59 26 chr20 52803798 52803850 -19350032 - MIR SINE MIR -114 148 99 285 271 65 61 chr20 52804286 52804500 -19349382 - L1ME4a LINE L1 -12 6109 5895 508 321 87 42 chr20 52804522 52804787 -19349095 - L1ME4a LINE L1 -10 6111 5835 2318 96 0 0 chr20 52804802 52805103 -19348779 + AluSq SINE Alu 1 301 -12 351 219 162 0 chr20 52805146 52805251 -19348631 - L1MC4a LINE L1 -1980 5828 5707 23 54 0 0 chr20 52805258 52805295 -19348587 + AT_rich Low_complexity Low_complexity 1 37 0 804 191 0 0 chr20 52805346 52805477 -19348405 - FLAM_C SINE Alu -2 131 1 322 292 66 7 chr20 52805481 52805618 -19348264 - L1ME4a LINE L1 -295 5826 5682 552 254 30 53 chr20 52806423 52806592 -19347290 + MER5B DNA MER1_type 1 165 -13 203 313 36 24 chr20 52806945 52807028 -19346854 - L2 LINE L2 -8 3305 3222 711 337 55 47 chr20 52807055 52807764 -19346118 - L2 LINE L2 -2 3270 2547 1237 164 33 5 chr20 52807764 52807977 -19345905 + MER20 DNA MER1_type 1 219 0 711 337 55 47 chr20 52807977 52808199 -19345683 - L2 LINE L2 -725 2547 2328 222 284 126 8 chr20 52808203 52808330 -19345552 + L2 LINE L2 3167 3308 -5 415 302 50 54 chr20 52808719 52808886 -19344996 - MIR3 SINE MIR -60 148 14 678 255 51 15 chr20 52812010 52812206 -19341676 + MIR SINE MIR 23 225 -37 371 235 34 36 chr20 52812236 52812415 -19341467 - MIR SINE MIR -63 145 16 273 286 16 44 chr20 52812881 52813063 -19340819 + (GGGTG)n Simple_repeat Simple_repeat 4 180 0 200 250 0 0 chr20 52813731 52813775 -19340107 - L2 LINE L2 -107 3165 3122 2021 132 14 0 chr20 52813900 52814188 -19339694 + AluSx SINE Alu 2 293 -19 215 300 64 55 chr20 52814383 52814493 -19339389 + L2 LINE L2 3146 3256 -16 308 345 8 0 chr20 52814542 52814664 -19339218 + (TGGA)n Simple_repeat Simple_repeat 1 123 0 212 256 0 12 chr20 52814720 52814802 -19339080 + (TGGG)n Simple_repeat Simple_repeat 2 82 0 263 254 0 0 chr20 52815311 52815370 -19338512 - MIR SINE MIR -118 144 86 269 208 20 154 chr20 52815501 52815650 -19338232 - MIR SINE MIR -114 148 20 361 261 43 7 chr20 52815965 52816103 -19337779 - L2 LINE L2 -5 3267 3125 286 233 0 4 chr20 52816265 52816353 -19337529 - MIR SINE MIR -84 124 38 563 270 40 0 chr20 52816359 52816511 -19337371 + MIR SINE MIR 12 169 -93 278 258 72 0 chr20 52817330 52817426 -19336456 - L2 LINE L2 -30 3242 3140 304 299 24 8 chr20 52817426 52817553 -19336329 + MIR SINE MIR 1 129 -133 368 208 148 13 chr20 52817577 52817726 -19336156 - MIR SINE MIR -1 261 93 607 131 61 0 chr20 52817727 52817826 -19336056 + FLAM_C SINE Alu 1 105 -38 250 341 27 2 chr20 52818011 52818145 -19335737 - MIR SINE MIR -65 143 27 183 266 0 0 chr20 52818442 52818506 -19335376 + (TG)n Simple_repeat Simple_repeat 1 64 0 849 221 62 13 chr20 52819200 52819331 -19334551 - MIR SINE MIR -21 241 93 1789 161 62 27 chr20 52819331 52819667 -19334215 - MER7A DNA MER2_type 0 346 1 849 221 62 13 chr20 52819667 52819761 -19334121 - MIR SINE MIR -169 93 5 307 339 0 8 chr20 52819771 52819898 -19333984 + (TCCA)n Simple_repeat Simple_repeat 3 128 0 * 451 270 19 6 chr20 52819820 52819979 -19333903 + (TTCA)n Simple_repeat Simple_repeat 4 164 0 30 69 0 0 chr20 52822931 52822989 -19330893 + GC_rich Low_complexity Low_complexity 1 58 0 21 0 0 0 chr20 52825434 52825455 -19328427 + AT_rich Low_complexity Low_complexity 1 21 0 205 195 0 0 chr20 52826957 52826998 -19326884 + A-rich Low_complexity Low_complexity 1 41 0 25 0 0 0 chr20 52829912 52829937 -19323945 + GC_rich Low_complexity Low_complexity 1 25 0 1976 143 3 3 chr20 52831015 52831316 -19322566 + AluSx SINE Alu 1 301 -11 979 183 0 6 chr20 52831316 52831485 -19322397 + AluSg/x SINE Alu 134 301 -11 278 59 0 0 chr20 52831485 52831519 -19322363 + MER89 LTR ERV1 499 532 -27 2485 70 3 6 chr20 52831739 52832051 -19321831 - AluY SINE Alu 0 311 1 2322 103 3 3 chr20 52832484 52832796 -19321086 + AluSp SINE Alu 1 312 -1 306 232 184 8 chr20 52832988 52833113 -19320769 - MIR SINE MIR -112 150 4 421 82 0 33 chr20 52833621 52833682 -19320200 + Alu SINE Alu 238 296 -16 2570 67 0 0 chr20 52833686 52833983 -19319899 + AluY SINE Alu 1 297 -14 1862 119 0 0 chr20 52834947 52835198 -19318684 + AluSx SINE Alu 44 294 -18 194 250 0 0 chr20 52835628 52835676 -19318206 + MIR SINE MIR 113 160 -102 332 143 129 0 chr20 52836537 52836607 -19317275 + MER5A DNA MER1_type 6 84 -105 1193 195 43 80 chr20 52836722 52837024 -19316858 + AluJo SINE Alu 1 291 -11 536 240 163 85 chr20 52837072 52837435 -19316447 + MLT1K LTR MaLR 189 579 -9 2392 95 3 3 chr20 52837645 52837951 -19315931 + AluSq SINE Alu 3 308 -5 367 152 303 0 chr20 52838034 52838133 -19315749 + MIR SINE MIR 127 255 -7 2137 128 0 3 chr20 52838290 52838586 -19315296 + AluSq SINE Alu 1 295 -18 682 192 11 8 chr20 52838655 52838832 -19315050 + AluJo SINE Alu 83 301 -11 19571 38 3 0 chr20 52838982 52842095 -19311787 + L1PA4 LINE L1 3041 6152 -3 6358 31 4 0 chr20 52842204 52842946 -19310936 + L1PA4 LINE L1 5408 6152 -3 180 0 0 0 chr20 52842978 52842998 -19310884 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 6552 25 0 0 chr20 52843055 52843803 -19310079 + L1PA3 LINE L1 5408 6155 0 21 36 0 0 chr20 52844721 52844749 -19309133 + AT_rich Low_complexity Low_complexity 1 28 0 2269 101 0 7 chr20 52845080 52845376 -19308506 + AluSg SINE Alu 1 294 -16 536 318 113 18 chr20 52845576 52845956 -19307926 - L2 LINE L2 -5 3308 2893 23 0 0 0 chr20 52846082 52846105 -19307777 + AT_rich Low_complexity Low_complexity 1 23 0 285 355 74 0 chr20 52846987 52847108 -19306774 - L2 LINE L2 -2 3270 3141 222 37 0 0 chr20 52851557 52851584 -19302298 + (CA)n Simple_repeat Simple_repeat 2 28 0 243 290 105 40 chr20 52853835 52854035 -19299847 + MIR SINE MIR 40 252 -10 809 304 45 65 chr20 52854051 52854628 -19299254 + L2 LINE L2 2648 3221 -92 22 56 0 0 chr20 52854657 52854693 -19299189 + AT_rich Low_complexity Low_complexity 1 36 0 23 68 0 0 chr20 52854731 52854775 -19299107 + AT_rich Low_complexity Low_complexity 1 44 0 2348 33 0 0 chr20 52854830 52855125 -19298757 + L1PA4 LINE L1 5870 6164 0 2629 228 118 16 chr20 52855133 52856361 -19297521 + L1MB7 LINE L1 1532 2889 -3493 269 167 0 0 chr20 52856361 52856403 -19297479 - Tigger7 DNA MER2_type -297 42 1 * 430 167 90 0 chr20 52856403 52856472 -19297410 + MLT2B1 LTR ERVL 354 429 -91 3322 194 25 43 chr20 52856482 52857271 -19296611 + L1MB7 LINE L1 5646 6420 0 27 0 0 0 chr20 52857633 52857660 -19296222 + AT_rich Low_complexity Low_complexity 1 27 0 1647 167 4 11 chr20 52857683 52857946 -19295936 - AluJo SINE Alu -35 277 17 610 314 62 77 chr20 52857950 52858431 -19295451 - LTR67 LTR ERVL -79 478 5 2123 81 4 7 chr20 52859800 52860073 -19293809 - AluY SINE Alu -1 310 39 21 36 0 0 chr20 52860462 52860490 -19293392 + AT_rich Low_complexity Low_complexity 1 28 0 2172 121 19 0 chr20 52861883 52862190 -19291692 + AluSp SINE Alu 1 313 0 396 59 0 0 chr20 52862184 52862235 -19291647 + (GGAA)n Simple_repeat Simple_repeat 3 53 0 1393 28 17 0 chr20 52862235 52862412 -19291470 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 396 329 63 25 chr20 52867781 52867939 -19285943 - MIR SINE MIR -87 175 12 2326 94 7 3 chr20 52868118 52868427 -19285455 - AluY SINE Alu -1 310 1 22 0 0 0 chr20 52868720 52868742 -19285140 + AT_rich Low_complexity Low_complexity 1 22 0 226 327 125 10 chr20 52868989 52869093 -19284789 - L2 LINE L2 -220 3052 2937 21 0 0 0 chr20 52869456 52869477 -19284405 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr20 52870375 52870400 -19283482 + AT_rich Low_complexity Low_complexity 1 25 0 566 338 96 35 chr20 52870400 52870794 -19283088 - L2 LINE L2 -19 3294 2877 1047 252 175 11 chr20 52871105 52871546 -19282336 + L2 LINE L2 1859 2371 -943 1073 275 132 28 chr20 52871549 52872018 -19281864 + LTR53 LTR ERVL 2 519 0 508 381 139 15 chr20 52872018 52872847 -19281035 + L2 LINE L2 2372 3313 0 5766 192 16 14 chr20 52873739 52874955 -19278927 - L1P LINE L1 -2792 3354 2137 921 255 160 5 chr20 52875286 52875655 -19278227 - L1ME LINE L1 -359 5811 5386 2272 264 77 25 chr20 52875762 52876976 -19276906 - L1ME LINE L1 -747 5399 4146 344 202 0 43 chr20 52877017 52877111 -19276771 - L1MA8 LINE L1 -10 6281 6192 4654 206 27 3 chr20 52877126 52878879 -19275003 - L1MA9 LINE L1 -232 6080 4295 2853 178 41 16 chr20 52878873 52879486 -19274396 + L1MA9 LINE L1 3652 4279 -1867 * 990 209 11 6 chr20 52879531 52879713 -19274169 + Tigger2 DNA MER2_type 2535 2717 -1 2476 109 58 21 chr20 52880370 52880802 -19273080 + LTR7 LTR ERV1 1 448 -2 20688 91 18 7 chr20 52880804 52883767 -19270115 + HERVH LTR ERV1 1 2995 -4718 915 133 7 0 chr20 52883746 52883896 -19269986 + HERVH LTR ERV1 3140 3290 -4423 * 3249 113 10 0 chr20 52883895 52884382 -19269500 + HERVH LTR ERV1 3500 3991 -3722 * 4217 150 8 1 chr20 52884381 52885046 -19268836 + HERVH LTR ERV1 4481 5149 -2564 1401 118 18 9 chr20 52885043 52885264 -19268618 + HERVH LTR ERV1 5597 5819 -1894 * 2471 85 48 13 chr20 52885264 52885641 -19268241 + HERVH LTR ERV1 7324 7713 0 2384 120 58 21 chr20 52885641 52886073 -19267809 + LTR7 LTR ERV1 1 448 -2 1410 206 134 0 chr20 52886331 52886651 -19267231 - MER47A DNA MER2_type 0 366 4 819 149 43 0 chr20 52886653 52886814 -19267068 - L1MA8 LINE L1 -28 6263 6096 261 367 0 9 chr20 52887119 52887228 -19266654 + MIR SINE MIR 100 207 -55 21 36 0 0 chr20 52887511 52887539 -19266343 + AT_rich Low_complexity Low_complexity 1 28 0 2157 133 0 16 chr20 52887667 52887983 -19265899 - AluSx SINE Alu -1 311 1 21 0 0 0 chr20 52887992 52888013 -19265869 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr20 52888297 52888322 -19265560 + AT_rich Low_complexity Low_complexity 1 25 0 291 283 10 50 chr20 52888705 52888804 -19265078 + MLT1H LTR MaLR 61 155 -394 369 229 224 24 chr20 52888971 52889141 -19264741 + MLT1H LTR MaLR 320 523 -26 230 162 0 0 chr20 52889261 52889298 -19264584 + MER57A LTR ERV1 2 38 -365 1441 150 0 9 chr20 52889324 52889551 -19264331 + MER4E LTR ERV1 555 779 0 21 36 0 0 chr20 52890655 52890683 -19263199 + AT_rich Low_complexity Low_complexity 1 28 0 1895 173 21 0 chr20 52891157 52891493 -19262389 - MER2 DNA MER2_type 0 344 2 1666 221 157 50 chr20 52891614 52892257 -19261625 + MER50 LTR ERV1 1 712 -22 319 316 10 0 chr20 52892282 52892380 -19261502 - MIR SINE MIR -7 255 157 657 192 0 0 chr20 52892381 52892485 -19261397 + LTR18A LTR ERVL 1 104 -253 3874 152 23 0 chr20 52892489 52893093 -19260789 + HERVL18 LTR ERVL 5430 6047 0 1246 221 149 37 chr20 52893094 52893316 -19260566 + LTR18A LTR ERVL 1 271 -86 2565 55 3 0 chr20 52893316 52893626 -19260256 - AluY SINE Alu 0 311 1 1246 221 149 37 chr20 52893626 52893724 -19260158 + LTR18A LTR ERVL 271 357 0 211 250 23 0 chr20 52893731 52893775 -19260107 - MIR SINE MIR -203 59 15 360 172 35 0 chr20 52894179 52894266 -19259616 - L1PA13 LINE L1 -3 6160 6071 234 319 86 0 chr20 52895382 52895498 -19258384 - MER94 DNA DNA 0 134 9 23 0 0 0 chr20 52895537 52895560 -19258322 + AT_rich Low_complexity Low_complexity 1 23 0 1679 212 60 26 chr20 52895802 52896298 -19257584 + Charlie1 DNA MER1_type 33 545 -2216 4819 106 0 0 chr20 52896308 52897350 -19256532 - L1PA8A LINE L1 0 6131 5188 8315 152 16 6 chr20 52897353 52898806 -19255076 + L1P LINE L1 3679 5147 -999 769 169 46 82 chr20 52898841 52899060 -19254822 + Charlie1 DNA MER1_type 703 913 -1848 2722 242 23 36 chr20 52899081 52899928 -19253954 + L1MC3 LINE L1 5489 6341 -1467 10900 33 3 0 chr20 52899943 52902023 -19251859 + L1PA4 LINE L1 4068 6154 -1 230 233 17 0 chr20 52902051 52902111 -19251771 + L1MDa LINE L1 1874 1934 -4606 180 0 0 0 chr20 52902112 52902132 -19251750 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 3433 194 147 128 chr20 52902135 52903064 -19250818 + L1MD3 LINE L1 6365 7460 -535 414 280 8 32 chr20 52903064 52903189 -19250693 + MLT1F1 LTR MaLR 4 125 -442 3433 194 147 128 chr20 52903189 52903728 -19250154 + L1MD3 LINE L1 7460 7987 -8 487 365 41 16 chr20 52904383 52904627 -19249255 - MIR SINE MIR -5 257 8 2463 72 0 3 chr20 52904680 52904986 -19248896 - AluY SINE Alu -6 305 1 304 289 6 90 chr20 52905613 52905769 -19248113 - MIR SINE MIR -50 212 70 23 33 0 0 chr20 52906558 52906588 -19247294 + AT_rich Low_complexity Low_complexity 1 30 0 15332 40 5 1 chr20 52908521 52911168 -19242714 - L1PA4 LINE L1 -1 6154 3499 7883 38 0 3 chr20 52911168 52912162 -19241720 + L1PA4 LINE L1 2522 3512 -2634 219 157 0 59 chr20 52912541 52912592 -19241290 + (TATATG)n Simple_repeat Simple_repeat 1 48 0 1954 211 49 5 chr20 52913442 52913850 -19240032 + MSTB LTR MaLR 1 426 0 292 267 63 5 chr20 52914999 52915205 -19238677 + L1M4 LINE L1 3137 3354 -2792 2326 202 49 34 chr20 52915263 52915977 -19237905 + L1MB3 LINE L1 4767 5489 -694 743 151 32 9 chr20 52916013 52916237 -19237645 + GA-rich Low_complexity Low_complexity 1 229 0 3294 183 18 24 chr20 52916237 52916909 -19236973 + L1MB3 LINE L1 5476 6143 -40 2212 51 0 7 chr20 52916969 52917275 -19236607 - AluY SINE Alu 0 313 10 950 293 62 30 chr20 52917310 52917908 -19235974 + L1M4 LINE L1 3511 4127 -2019 27 62 0 0 chr20 52918022 52918070 -19235812 + AT_rich Low_complexity Low_complexity 1 48 0 365 227 41 0 chr20 52918103 52918275 -19235607 + (TA)n Simple_repeat Simple_repeat 2 180 0 244 297 57 46 chr20 53018627 53018900 -19134982 + L2 LINE L2 2658 3061 -211 516 193 248 7 chr20 53018975 53019120 -19134762 - MER5A DNA MER1_type 0 189 10 226 286 54 54 chr20 53019264 53019376 -19134506 - MIR SINE MIR -20 242 131 415 301 32 21 chr20 53019514 53019700 -19134182 + MIR SINE MIR 36 223 -39 191 302 0 0 chr20 53019947 53019990 -19133892 + MIR SINE MIR 220 262 0 235 274 155 0 chr20 53020205 53020289 -19133593 + MIR3 SINE MIR 85 181 -27 371 265 65 0 chr20 53020975 53021108 -19132774 - MIR SINE MIR -54 208 65 292 318 62 23 chr20 53021112 53021241 -19132641 + MIR SINE MIR 59 192 -70 270 252 174 26 chr20 53021667 53021782 -19132100 - MIR SINE MIR -12 250 119 539 255 116 19 chr20 53022062 53022278 -19131604 + MIR SINE MIR 20 256 -6 207 309 92 70 chr20 53022407 53022679 -19131203 + L2 LINE L2 2991 3268 -4 232 245 245 0 chr20 53022736 53022830 -19131052 + L2 LINE L2 3197 3313 0 340 313 80 13 chr20 53022945 53023095 -19130787 - MIR SINE MIR -36 226 67 21 0 0 0 chr20 53023588 53023609 -19130273 + AT_rich Low_complexity Low_complexity 1 21 0 787 282 20 20 chr20 53024358 53024519 -19129363 - MIR SINE MIR -1 261 98 1793 126 91 13 chr20 53024519 53024837 -19129045 - MER2 DNA MER2_type -1 343 1 787 282 20 20 chr20 53024837 53024923 -19128959 - MIR SINE MIR -163 99 14 321 270 24 8 chr20 53025197 53025323 -19128559 + MIR SINE MIR 21 148 -60 1968 125 42 14 chr20 53025708 53025996 -19127886 + AluSx SINE Alu 4 299 -13 228 331 207 8 chr20 53026032 53026153 -19127729 + MIR SINE MIR 51 195 -67 570 318 19 28 chr20 53026199 53026410 -19127472 - MIR SINE MIR -48 214 6 278 224 158 0 chr20 53026497 53026573 -19127309 + MIR SINE MIR 33 120 -88 207 0 0 0 chr20 53026610 53026633 -19127249 + (TTCA)n Simple_repeat Simple_repeat 1 23 0 256 299 0 13 chr20 53027017 53027094 -19126788 + L2 LINE L2 2970 3045 -227 216 0 0 0 chr20 53027369 53027393 -19126489 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 377 311 114 41 chr20 53027419 53027883 -19125999 - L2 LINE L2 -49 3223 2728 228 163 0 0 chr20 53028360 53028403 -19125479 + (CAG)n Simple_repeat Simple_repeat 1 43 0 22 56 0 0 chr20 53028688 53028724 -19125158 + GC_rich Low_complexity Low_complexity 1 36 0 233 286 92 31 chr20 53028942 53029040 -19124842 - L2 LINE L2 -23 3249 3146 948 280 56 43 chr20 53031346 53031437 -19122445 - L2 LINE L2 -1 3312 3224 2253 128 3 0 chr20 53031437 53031741 -19122141 + AluSq SINE Alu 1 305 -8 948 280 56 43 chr20 53031741 53032042 -19121840 - L2 LINE L2 -89 3224 2915 2080 121 35 0 chr20 53032186 53032476 -19121406 - AluSx SINE Alu -12 300 1 2130 236 121 61 chr20 53033292 53033883 -19119999 - L2 LINE L2 0 3313 2759 2078 140 0 19 chr20 53033883 53034190 -19119692 + AluJo SINE Alu 1 301 -11 1836 141 41 14 chr20 53034190 53034481 -19119401 + AluJb SINE Alu 1 299 -13 2130 236 121 61 chr20 53034481 53035161 -19118721 - L2 LINE L2 -553 2760 1949 561 278 51 0 chr20 53035223 53035399 -19118483 - L2 LINE L2 -1327 1987 1803 228 351 45 15 chr20 53036269 53036403 -19117479 - L2 LINE L2 -1 3271 3134 258 238 48 16 chr20 53036441 53036504 -19117378 - L2 LINE L2 0 3272 3208 186 254 36 18 chr20 53036593 53036648 -19117234 - MIR SINE MIR -6 256 201 334 255 72 33 chr20 53036772 53036925 -19116957 - L2 LINE L2 -181 3091 2933 578 308 147 32 chr20 53037074 53037516 -19116366 + MLT1L LTR MaLR 8 500 -115 623 282 36 52 chr20 53038191 53038439 -19115443 + MIR SINE MIR 19 262 0 203 250 0 0 chr20 53038518 53038562 -19115320 + (TTCA)n Simple_repeat Simple_repeat 1 44 0 204 265 0 0 chr20 53039198 53039247 -19114635 + L2 LINE L2 3248 3296 -17 719 282 36 5 chr20 53039735 53039930 -19113952 - MIR SINE MIR -50 212 12 254 336 0 0 chr20 53040037 53040168 -19113714 + L2 LINE L2 2919 3049 -223 192 125 0 0 chr20 53040368 53040400 -19113482 + (TGGA)n Simple_repeat Simple_repeat 1 32 0 528 274 101 59 chr20 53040466 53040571 -19113311 - L2 LINE L2 0 3313 3214 351 65 0 0 chr20 53040571 53040617 -19113265 + (TG)n Simple_repeat Simple_repeat 1 46 0 528 274 101 59 chr20 53040617 53040817 -19113065 - L2 LINE L2 -99 3214 2995 597 310 108 11 chr20 53040879 53041260 -19112622 - L2 LINE L2 -452 2862 2445 550 202 42 0 chr20 53041270 53041389 -19112493 - MIR SINE MIR -5 257 134 228 213 0 0 chr20 53041549 53041596 -19112286 - MIR SINE MIR 0 262 216 520 208 130 7 chr20 53041644 53041798 -19112084 - MIR SINE MIR -52 210 38 355 179 47 0 chr20 53041980 53042086 -19111796 + (CA)n Simple_repeat Simple_repeat 1 111 0 206 222 22 0 chr20 53042449 53042494 -19111388 + CT-rich Low_complexity Low_complexity 2 47 0 640 171 109 43 chr20 53042742 53042952 -19110930 - L1ME3A LINE L1 -193 5977 5754 323 299 11 0 chr20 53042952 53043039 -19110843 + CT-rich Low_complexity Low_complexity 3 90 0 288 91 0 0 chr20 53043093 53043137 -19110745 + (CA)n Simple_repeat Simple_repeat 1 44 0 608 293 69 5 chr20 53044179 53044367 -19109515 - MIR SINE MIR -41 221 22 201 381 38 0 chr20 53044584 53044689 -19109193 - MIR SINE MIR -77 185 77 259 255 0 0 chr20 53044774 53044825 -19109057 + MIR3 SINE MIR 107 157 -51 241 287 128 0 chr20 53044813 53044907 -19108975 + MIR SINE MIR 35 140 -122 * 612 275 57 4 chr20 53044978 53045235 -19108647 - LTR16A LTR ERVL -1 456 172 288 285 139 28 chr20 53045934 53046078 -19107804 - MIR SINE MIR -65 197 38 193 236 36 0 chr20 53046133 53046188 -19107694 - L3 LINE CR1 -108 1469 1413 232 235 255 0 chr20 53046439 53046537 -19107345 - MIR3 SINE MIR -10 198 76 554 265 121 10 chr20 53046589 53046814 -19107068 - MIR SINE MIR -4 258 15 258 310 43 52 chr20 53047029 53047145 -19106737 + L2 LINE L2 3146 3260 -12 423 256 45 40 chr20 53047150 53047326 -19106556 - L2 LINE L2 -210 3062 2886 351 232 32 21 chr20 53047886 53047981 -19105901 - L2 LINE L2 -1025 2289 2194 492 261 100 37 chr20 53048003 53048217 -19105665 + MIR SINE MIR 34 262 0 402 294 14 35 chr20 53048261 53048404 -19105478 - MIR SINE MIR 0 262 123 1296 310 176 7 chr20 53048512 53049342 -19104540 + L2 LINE L2 1605 2574 -740 1413 273 105 0 chr20 53049356 53049891 -19103991 - L2 LINE L2 -842 2472 1882 299 276 35 11 chr20 53049896 53049983 -19103899 + L2 LINE L2 3134 3222 -50 325 297 51 93 chr20 53050221 53050575 -19103307 - L1MEd LINE L1 -5737 382 44 339 186 0 14 chr20 53050620 53050690 -19103192 + L2 LINE L2 3245 3313 0 190 300 0 0 chr20 53051606 53051656 -19102226 + L2 LINE L2 2630 2679 -635 2657 199 21 26 chr20 53051658 53052277 -19101605 + L1MB7 LINE L1 5559 6174 -10 1157 273 76 22 chr20 53052283 53052827 -19101055 + L2 LINE L2 2746 3313 0 303 342 132 32 chr20 53052836 53053207 -19100675 - L2 LINE L2 -8 3305 2898 409 315 72 20 chr20 53053379 53053630 -19100252 - L2 LINE L2 -495 2819 2556 391 259 7 56 chr20 53053666 53053809 -19100073 - MIR SINE MIR 0 262 127 286 336 10 19 chr20 53054008 53054112 -19099770 - L2 LINE L2 -996 2318 2216 904 132 0 66 chr20 53054171 53054323 -19099559 + FLAM_C SINE Alu 1 142 -1 235 295 133 46 chr20 53054711 53055168 -19098714 - L2 LINE L2 -1208 2106 1610 267 31 0 0 chr20 53055226 53055258 -19098624 + (GGA)n Simple_repeat Simple_repeat 3 34 0 1893 156 9 34 chr20 53055732 53056052 -19097830 - AluJb SINE Alu 0 312 1 207 389 45 28 chr20 53056153 53056385 -19097497 + MIR SINE MIR 20 261 -1 487 335 37 7 chr20 53056458 53056727 -19097155 + L1ME3 LINE L1 5653 5929 -233 27 29 0 0 chr20 53056934 53056968 -19096914 + AT_rich Low_complexity Low_complexity 1 34 0 465 306 28 11 chr20 53057087 53057267 -19096615 - MIR SINE MIR -60 202 20 2113 120 0 0 chr20 53057304 53057580 -19096302 + AluSx SINE Alu 3 278 -34 278 227 82 45 chr20 53057802 53057912 -19095970 + MIR3 SINE MIR 3 116 -92 247 281 51 102 chr20 53058262 53058458 -19095424 - L2 LINE L2 -532 2782 2597 288 269 216 30 chr20 53059026 53059193 -19094689 - MIR SINE MIR -18 244 47 184 304 76 11 chr20 53059293 53059385 -19094497 - L2 LINE L2 0 3272 3175 381 333 111 0 chr20 53060450 53060612 -19093270 + MIR SINE MIR 8 187 -75 363 213 47 16 chr20 53060688 53060796 -19093086 - MIR SINE MIR -61 147 38 233 119 24 0 chr20 53060981 53061023 -19092859 + (CA)n Simple_repeat Simple_repeat 1 43 0 217 289 0 0 chr20 53061616 53061668 -19092214 - L2 LINE L2 -11 3261 3210 942 167 27 59 chr20 53062542 53062764 -19091118 + MER20 DNA MER1_type 1 215 -4 222 121 0 0 chr20 53062810 53062843 -19091039 - MIR SINE MIR -138 70 38 361 330 8 8 chr20 53062925 53063043 -19090839 - L2 LINE L2 -8 3264 3147 326 228 35 4 chr20 53063049 53063175 -19090707 + MIR SINE MIR 79 210 -52 237 314 51 17 chr20 53063301 53063419 -19090463 - MIR SINE MIR -51 211 90 324 289 149 0 chr20 53064156 53064277 -19089605 - L2 LINE L2 0 3272 3134 * 549 257 35 66 chr20 53064271 53064497 -19089385 + MIR SINE MIR 45 262 0 718 297 45 74 chr20 53064557 53065143 -19088739 - L2 LINE L2 -191 3081 2510 186 388 55 16 chr20 53065295 53065478 -19088404 + L2 LINE L2 2924 3113 -159 2598 242 102 33 chr20 53065496 53066661 -19087221 + L2 LINE L2 2065 3307 -6 400 278 135 8 chr20 53066690 53066823 -19087059 + L2 LINE L2 3123 3272 0 1555 116 5 0 chr20 53067429 53067645 -19086237 + MER20 DNA MER1_type 1 217 -2 205 115 58 58 chr20 53067841 53067893 -19085989 + GA-rich Low_complexity Low_complexity 6 57 0 2354 106 3 0 chr20 53068160 53068471 -19085411 + AluSx SINE Alu 1 312 0 710 248 117 9 chr20 53068489 53068719 -19085163 - MIR SINE MIR 0 262 8 317 301 57 24 chr20 53068732 53068855 -19085027 - MIR SINE MIR -59 203 77 1072 187 5 5 chr20 53068975 53069173 -19084709 - MER20 DNA MER1_type 0 219 22 224 300 14 0 chr20 53069247 53069317 -19084565 - MIR SINE MIR -74 134 64 521 297 18 6 chr20 53069553 53069718 -19084164 + MIR3 SINE MIR 39 205 -3 324 297 0 20 chr20 53069720 53069821 -19084061 + MIR SINE MIR 38 136 -72 597 327 116 30 chr20 53069845 53070081 -19083801 + L2 LINE L2 2871 3152 -120 366 23 0 0 chr20 53070081 53070124 -19083758 + (TG)n Simple_repeat Simple_repeat 2 44 0 597 327 116 30 chr20 53070124 53070257 -19083625 + L2 LINE L2 3152 3272 0 2331 82 3 3 chr20 53070899 53071191 -19082691 + AluSg SINE Alu 1 292 -18 227 251 6 0 chr20 53071202 53071259 -19082623 + MIR SINE MIR 101 160 -48 224 296 151 57 chr20 53071350 53071509 -19082373 + MIR3 SINE MIR 33 206 -2 238 235 161 25 chr20 53072003 53072084 -19081798 + L2 LINE L2 3160 3251 -21 915 229 36 27 chr20 53072587 53072810 -19081072 - MIR SINE MIR -10 252 28 1068 168 0 0 chr20 53072935 53073096 -19080786 - FRAM SINE Alu -20 156 1 459 308 111 43 chr20 53074418 53074905 -19078977 + L2 LINE L2 2652 3179 -93 1591 282 126 14 chr20 53075508 53076036 -19077846 + MER20B DNA MER1_type 43 661 -122 2419 79 3 16 chr20 53076036 53076351 -19077531 - AluSp SINE Alu -2 311 1 1591 282 126 14 chr20 53076351 53076482 -19077400 + MER20B DNA MER1_type 661 776 -7 1280 240 68 57 chr20 53076490 53077020 -19076862 + L2 LINE L2 2183 2718 -596 1049 196 5 27 chr20 53077047 53077271 -19076611 - MER20 DNA MER1_type 0 219 1 192 171 57 0 chr20 53077627 53077662 -19076220 - L3 LINE CR1 -13 1564 1528 534 263 68 0 chr20 53077941 53078074 -19075808 + MIR SINE MIR 2 143 -119 1420 282 212 30 chr20 53078124 53078273 -19075609 + L2 LINE L2 1755 1875 -1438 2157 95 44 0 chr20 53078273 53078568 -19075314 - AluSp SINE Alu -5 308 1 1420 282 212 30 chr20 53078568 53079467 -19074415 + L2 LINE L2 1875 2992 -321 228 107 0 89 chr20 53079978 53080034 -19073848 + (CGGGG)n Simple_repeat Simple_repeat 4 54 0 189 74 0 0 chr20 53081357 53081384 -19072498 + (TG)n Simple_repeat Simple_repeat 1 27 0 1647 231 107 63 chr20 53084877 53085461 -19068421 + L1MC5 LINE L1 6970 7610 -351 378 0 0 0 chr20 53085461 53085503 -19068379 + (TG)n Simple_repeat Simple_repeat 2 43 0 1647 231 107 63 chr20 53085503 53085821 -19068061 + L1MC5 LINE L1 7610 7912 -49 757 258 98 22 chr20 53086378 53086603 -19067279 - MIR SINE MIR -8 254 13 270 191 124 11 chr20 53086718 53086807 -19067075 - MIR SINE MIR -71 137 39 276 308 126 31 chr20 53087700 53087859 -19066023 + MIR SINE MIR 22 195 -67 2039 118 0 0 chr20 53087882 53088154 -19065728 + AluSq SINE Alu 37 308 -5 358 265 205 12 chr20 53088217 53088383 -19065499 + L1ME4a LINE L1 5870 6067 -54 1830 144 19 55 chr20 53089425 53089737 -19064145 - AluJo SINE Alu -11 301 1 277 250 73 40 chr20 53090265 53090389 -19063493 + L2 LINE L2 3133 3260 -12 180 42 0 0 chr20 53091082 53091106 -19062776 + L2 LINE L2 3214 3237 -35 274 207 27 36 chr20 53091826 53091937 -19061945 + CT-rich Low_complexity Low_complexity 2 111 0 967 207 62 0 chr20 53092316 53092509 -19061373 - MER3 DNA MER1_type 0 209 5 1099 208 42 8 chr20 53092663 53092928 -19060954 + MER33 DNA MER1_type 51 324 0 449 263 109 0 chr20 53092992 53093148 -19060734 - MER3 DNA MER1_type 0 209 37 393 235 294 0 chr20 53094247 53094383 -19059499 - MIR SINE MIR -21 241 66 2374 92 0 3 chr20 53094499 53094792 -19059090 - AluSq SINE Alu -21 292 1 199 203 135 0 chr20 53095066 53095140 -19058742 + L2 LINE L2 2809 2892 -380 225 188 31 16 chr20 53095666 53095730 -19058152 + (TAA)n Simple_repeat Simple_repeat 1 65 0 500 294 102 21 chr20 53098006 53098193 -19055689 - MIR3 SINE MIR -3 205 4 317 274 26 53 chr20 53098235 53098348 -19055534 - MIR SINE MIR -79 183 74 1111 199 42 5 chr20 53098487 53098703 -19055179 + MER58A DNA MER1_type 1 224 0 503 259 137 9 chr20 53099114 53099326 -19054556 + L1ME4a LINE L1 5590 5828 -293 343 251 187 12 chr20 53099512 53099763 -19054119 + L1ME4a LINE L1 5825 6119 -2 1690 165 47 30 chr20 53100174 53100471 -19053411 + AluJo SINE Alu 1 302 -10 420 236 74 13 chr20 53100961 53101117 -19052765 - MIR SINE MIR -63 145 27 206 360 27 0 chr20 53101374 53101449 -19052433 - L2 LINE L2 -523 2791 2715 344 305 145 0 chr20 53102146 53102277 -19051605 - L3 LINE CR1 -11 1566 1417 216 0 0 0 chr20 53103130 53103154 -19050728 + (A)n Simple_repeat Simple_repeat 1 24 0 365 284 164 11 chr20 53103327 53103522 -19050360 + MIR SINE MIR 37 252 -10 252 257 110 9 chr20 53103597 53103706 -19050176 - MIR SINE MIR -26 236 117 240 35 0 0 chr20 53104092 53104121 -19049761 + (TG)n Simple_repeat Simple_repeat 1 29 0 192 276 0 86 chr20 53104397 53104455 -19049427 + L2 LINE L2 3247 3299 -14 772 229 37 94 chr20 53105005 53105070 -19048812 + L3 LINE CR1 1333 1400 -177 1691 180 17 7 chr20 53105070 53105370 -19048512 + AluJo SINE Alu 2 304 -8 2279 104 0 0 chr20 53105372 53105681 -19048201 + AluSg SINE Alu 1 309 0 772 229 37 94 chr20 53105681 53105856 -19048026 + L3 LINE CR1 1401 1563 -14 835 294 17 8 chr20 53106713 53106951 -19046931 + MIR SINE MIR 2 241 -21 524 366 56 15 chr20 53107362 53107772 -19046110 + L2 LINE L2 1671 2097 -1217 687 275 122 79 chr20 53107773 53108567 -19045315 + L2 LINE L2 2444 3271 -1 443 227 62 87 chr20 53111265 53111481 -19042401 - MIR SINE MIR -1 261 56 825 175 39 104 chr20 53111856 53112136 -19041746 - L1ME3 LINE L1 -6 6156 5895 239 345 0 0 chr20 53213086 53213170 -18940712 - MIR3 SINE MIR -111 97 14 248 269 13 39 chr20 53213198 53213276 -18940606 + L3b LINE CR1 1291 1366 -217 735 315 0 10 chr20 53214358 53214555 -18939327 + MER91A DNA MER1_type 1 195 -1 668 217 166 18 chr20 53214880 53215097 -18938785 + MIR SINE MIR 1 249 -13 412 354 68 21 chr20 53215394 53215719 -18938163 + L2 LINE L2 2553 2892 -422 270 301 53 38 chr20 53215864 53215997 -18937885 - L2 LINE L2 -7 3306 3172 325 319 55 55 chr20 53216150 53216423 -18937459 - L2 LINE L2 -371 2943 2671 235 333 62 28 chr20 53216580 53216757 -18937125 - L2 LINE L2 -908 2406 2224 1212 180 5 31 chr20 53216965 53217187 -18936695 + MER20 DNA MER1_type 1 216 -3 2174 94 0 0 chr20 53217596 53217882 -18936000 - AluSq SINE Alu -27 286 1 195 42 0 0 chr20 53217882 53217906 -18935976 + (TA)n Simple_repeat Simple_repeat 2 25 0 600 266 179 5 chr20 53217952 53218170 -18935712 + MIR SINE MIR 1 256 -6 222 37 0 0 chr20 53218177 53218204 -18935678 + (TG)n Simple_repeat Simple_repeat 2 28 0 953 265 7 20 chr20 53218315 53218613 -18935269 - L1ME4a LINE L1 -178 5943 5650 206 321 0 0 chr20 53218883 53218936 -18934946 + (TG)n Simple_repeat Simple_repeat 1 53 0 372 272 76 35 chr20 53219241 53219412 -18934470 - MIR3 SINE MIR -6 202 26 695 201 211 15 chr20 53219547 53219751 -18934131 + MIR SINE MIR 17 260 -2 180 0 0 0 chr20 53219770 53219790 -18934092 + (TTA)n Simple_repeat Simple_repeat 2 21 0 233 306 41 66 chr20 53219913 53220034 -18933848 + L2 LINE L2 3153 3270 -2 194 312 93 45 chr20 53220024 53220271 -18933611 - L2 LINE L2 -190 3082 2824 * 194 316 118 48 chr20 53220349 53220662 -18933220 - L2 LINE L2 -601 2713 2379 527 111 0 11 chr20 53220715 53220805 -18933077 + (TCCA)n Simple_repeat Simple_repeat 3 91 0 249 196 0 0 chr20 53220983 53221034 -18932848 - L2 LINE L2 -1 3312 3262 383 289 58 32 chr20 53221094 53221284 -18932598 + L3b LINE CR1 1184 1378 -205 393 252 41 21 chr20 53222954 53223108 -18930774 + MIR3 SINE MIR 36 155 -53 1818 151 3 3 chr20 53223348 53223640 -18930242 + AluJo SINE Alu 1 292 -20 871 229 36 27 chr20 53223765 53223988 -18929894 + MIR SINE MIR 28 252 -10 216 235 161 25 chr20 53224491 53224572 -18929310 - L2 LINE L2 -21 3251 3160 204 308 145 50 chr20 53225066 53225225 -18928657 - MIR3 SINE MIR -2 206 33 214 251 6 0 chr20 53225316 53225373 -18928509 - MIR SINE MIR -48 160 101 2208 82 3 3 chr20 53225384 53225676 -18928206 - AluSg SINE Alu -18 292 1 528 336 118 19 chr20 53226322 53226451 -18927431 - L2 LINE L2 0 3272 3157 366 23 0 0 chr20 53226451 53226494 -18927388 + (CA)n Simple_repeat Simple_repeat 2 44 0 528 336 118 19 chr20 53226494 53226730 -18927152 - L2 LINE L2 -115 3157 2871 316 297 0 20 chr20 53226754 53226855 -18927027 - MIR SINE MIR -72 136 38 499 297 18 6 chr20 53226857 53227022 -18926860 - MIR3 SINE MIR -3 205 39 217 300 14 0 chr20 53227258 53227328 -18926554 + MIR SINE MIR 64 134 -74 1112 187 5 5 chr20 53227402 53227600 -18926282 + MER20 DNA MER1_type 22 219 0 317 301 57 24 chr20 53227720 53227843 -18926039 + MIR SINE MIR 77 203 -59 666 244 63 19 chr20 53227848 53228086 -18925796 + MIR SINE MIR 17 262 0 2223 106 3 0 chr20 53228104 53228415 -18925467 - AluSx SINE Alu 0 312 1 205 115 58 58 chr20 53228682 53228734 -18925148 + CT-rich Low_complexity Low_complexity 6 57 0 1564 116 5 0 chr20 53228930 53229146 -18924736 - MER20 DNA MER1_type -2 217 1 375 278 135 8 chr20 53229752 53229885 -18923997 - L2 LINE L2 0 3272 3123 2653 242 102 33 chr20 53229914 53231079 -18922803 - L2 LINE L2 -6 3307 2065 206 388 55 16 chr20 53231097 53231280 -18922602 - L2 LINE L2 -159 3113 2924 719 303 85 65 chr20 53231319 53232018 -18921864 + L2 LINE L2 2366 3081 -191 550 257 35 66 chr20 53232078 53232304 -18921578 - MIR SINE MIR 0 262 45 322 289 149 0 chr20 53232298 53232419 -18921463 + L2 LINE L2 3134 3272 0 * 253 314 51 17 chr20 53233156 53233274 -18920608 + MIR SINE MIR 90 211 -51 331 286 56 8 chr20 53233400 53233526 -18920356 - MIR SINE MIR -52 210 79 367 330 8 8 chr20 53233532 53233650 -18920232 + L2 LINE L2 3147 3264 -8 222 121 0 0 chr20 53233732 53233765 -18920117 + MIR SINE MIR 38 70 -138 1043 167 27 59 chr20 53233811 53234033 -18919849 - MER20 DNA MER1_type -4 215 1 220 289 0 0 chr20 53234907 53234959 -18918923 + L2 LINE L2 3210 3261 -11 233 119 24 0 chr20 53235552 53235594 -18918288 + (TG)n Simple_repeat Simple_repeat 1 43 0 369 213 47 16 chr20 53235779 53235887 -18917995 + MIR SINE MIR 38 147 -61 397 333 111 0 chr20 53235963 53236125 -18917757 - MIR SINE MIR -75 187 8 183 372 0 12 chr20 53236169 53236255 -18917627 + MIR SINE MIR 32 116 -92 187 304 76 11 chr20 53237190 53237282 -18916600 + L2 LINE L2 3175 3272 0 297 269 216 30 chr20 53237382 53237549 -18916333 + MIR SINE MIR 47 244 -18 256 291 46 97 chr20 53238117 53238313 -18915569 + L2 LINE L2 2597 2782 -532 288 246 73 36 chr20 53238663 53238773 -18915109 - MIR3 SINE MIR -92 116 3 1987 120 0 0 chr20 53238995 53239271 -18914611 - AluSx SINE Alu -34 278 3 496 323 16 11 chr20 53239308 53239494 -18914388 + MIR SINE MIR 20 206 -56 27 29 0 0 chr20 53239607 53239641 -18914241 + AT_rich Low_complexity Low_complexity 1 34 0 514 335 37 7 chr20 53239848 53240117 -18913765 - L1ME3 LINE L1 -233 5929 5653 220 392 45 28 chr20 53240190 53240422 -18913460 - MIR SINE MIR -1 261 20 1767 166 10 19 chr20 53240523 53240837 -18913045 + AluJb SINE Alu 1 311 -1 267 31 0 0 chr20 53241317 53241349 -18912533 + (TCC)n Simple_repeat Simple_repeat 3 34 0 296 293 133 46 chr20 53241407 53241864 -18912018 + L2 LINE L2 1610 2106 -1208 851 132 0 66 chr20 53242252 53242404 -18911478 - FLAM_C SINE Alu -1 142 1 288 336 10 19 chr20 53242463 53242567 -18911315 + L2 LINE L2 2216 2318 -996 406 259 7 56 chr20 53242766 53242909 -18910973 + MIR SINE MIR 127 262 0 431 315 72 20 chr20 53242945 53243196 -18910686 + L2 LINE L2 2556 2819 -495 335 342 132 32 chr20 53243368 53243739 -18910143 + L2 LINE L2 2898 3305 -8 1193 283 72 18 chr20 53243748 53244292 -18909590 - L2 LINE L2 0 3313 2746 2965 200 21 26 chr20 53244298 53244917 -18908965 - L1MB7 LINE L1 -10 6174 5559 192 300 0 0 chr20 53244919 53244969 -18908913 - L2 LINE L2 -635 2679 2630 338 186 0 14 chr20 53245885 53245955 -18907927 - L2 LINE L2 0 3313 3245 337 297 51 93 chr20 53246000 53246354 -18907528 + L1MEd LINE L1 44 382 -5737 300 276 35 11 chr20 53246592 53246679 -18907203 - L2 LINE L2 -50 3222 3134 1449 273 105 0 chr20 53246684 53247219 -18906663 + L2 LINE L2 1882 2472 -842 1349 310 176 7 chr20 53247233 53248063 -18905819 - L2 LINE L2 -740 2574 1605 414 301 14 35 chr20 53248171 53248314 -18905568 + MIR SINE MIR 123 262 0 498 261 103 39 chr20 53248358 53248561 -18905321 - MIR SINE MIR 0 262 47 348 232 32 21 chr20 53248594 53248689 -18905193 + L2 LINE L2 2194 2289 -1025 434 256 45 40 chr20 53249249 53249425 -18904457 + L2 LINE L2 2886 3062 -210 270 328 35 43 chr20 53249430 53249546 -18904336 - L2 LINE L2 -12 3260 3146 567 266 121 9 chr20 53249761 53249986 -18903896 + MIR SINE MIR 15 258 -4 237 235 255 0 chr20 53250038 53250136 -18903746 + MIR3 SINE MIR 76 198 -10 199 236 36 0 chr20 53250387 53250442 -18903440 + L3 LINE CR1 1413 1469 -108 304 285 139 28 chr20 53250497 53250641 -18903241 + MIR SINE MIR 38 197 -65 652 301 60 20 chr20 53251280 53251582 -18902300 + LTR16A LTR ERVL 120 433 -17 258 289 96 9 chr20 53251668 53251801 -18902081 - MIR3 SINE MIR -7 201 35 214 397 35 0 chr20 53251886 53252002 -18901880 + MIR SINE MIR 77 196 -66 623 293 69 5 chr20 53252208 53252396 -18901486 + MIR SINE MIR 22 221 -41 288 91 0 0 chr20 53253438 53253482 -18900400 + (TG)n Simple_repeat Simple_repeat 1 44 0 323 299 11 0 chr20 53253536 53253623 -18900259 + GA-rich Low_complexity Low_complexity 3 90 0 639 171 109 43 chr20 53253623 53253833 -18900049 + L1ME3A LINE L1 5754 5977 -193 324 321 72 54 chr20 53253848 53254069 -18899813 + L1ME3 LINE L1 5934 6158 -4 206 222 22 0 chr20 53254081 53254126 -18899756 + GA-rich Low_complexity Low_complexity 2 47 0 355 179 47 0 chr20 53254489 53254595 -18899287 + (TG)n Simple_repeat Simple_repeat 1 111 0 529 208 130 7 chr20 53254777 53254931 -18898951 + MIR SINE MIR 38 210 -52 235 235 0 0 chr20 53254975 53255026 -18898856 + MIR SINE MIR 212 262 0 544 202 42 0 chr20 53255186 53255305 -18898577 + MIR SINE MIR 134 257 -5 634 310 108 11 chr20 53255315 53255696 -18898186 + L2 LINE L2 2445 2862 -452 545 274 101 59 chr20 53255758 53255958 -18897924 + L2 LINE L2 2995 3214 -99 351 65 0 0 chr20 53255958 53256004 -18897878 + (CA)n Simple_repeat Simple_repeat 1 46 0 545 274 101 59 chr20 53256004 53256109 -18897773 + L2 LINE L2 3214 3313 0 192 125 0 0 chr20 53256175 53256207 -18897675 + (TCCA)n Simple_repeat Simple_repeat 1 32 0 276 336 0 0 chr20 53256407 53256538 -18897344 - L2 LINE L2 -223 3049 2919 725 282 36 5 chr20 53256645 53256840 -18897042 + MIR SINE MIR 12 212 -50 207 265 0 0 chr20 53257328 53257377 -18896505 - L2 LINE L2 -17 3296 3248 203 250 0 0 chr20 53258013 53258057 -18895825 + (TGAA)n Simple_repeat Simple_repeat 1 44 0 622 282 36 52 chr20 53258136 53258384 -18895498 - MIR SINE MIR 0 262 19 594 308 147 32 chr20 53259059 53259501 -18894381 - MLT1L LTR MaLR -115 500 8 347 255 72 33 chr20 53259650 53259803 -18894079 + L2 LINE L2 2933 3091 -181 258 238 48 16 chr20 53260071 53260134 -18893748 + L2 LINE L2 3208 3272 0 239 358 45 15 chr20 53260172 53260306 -18893576 + L2 LINE L2 3134 3271 -1 2165 227 102 107 chr20 53261176 53262094 -18891788 + L2 LINE L2 1803 2724 -589 1714 141 41 14 chr20 53262094 53262385 -18891497 - AluJb SINE Alu -13 299 1 1949 140 0 19 chr20 53262385 53262692 -18891190 - AluJo SINE Alu -11 301 1 2165 227 102 107 chr20 53262692 53263283 -18890599 + L2 LINE L2 2722 3313 0 1953 121 35 0 chr20 53264099 53264389 -18889493 + AluSx SINE Alu 1 300 -12 965 285 53 41 chr20 53264533 53264834 -18889048 + L2 LINE L2 2915 3224 -89 2118 128 3 0 chr20 53264834 53265138 -18888744 - AluSq SINE Alu -8 305 1 965 285 53 41 chr20 53265138 53265229 -18888653 + L2 LINE L2 3224 3312 -1 243 294 88 29 chr20 53267535 53267637 -18886245 + L2 LINE L2 3146 3253 -19 22 56 0 0 chr20 53267851 53267887 -18885995 + GC_rich Low_complexity Low_complexity 1 36 0 228 163 0 0 chr20 53268172 53268215 -18885667 + (CTG)n Simple_repeat Simple_repeat 1 43 0 403 312 114 41 chr20 53268692 53269156 -18884726 + L2 LINE L2 2728 3223 -49 216 0 0 0 chr20 53269182 53269206 -18884676 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 183 230 212 26 chr20 53269294 53269407 -18884475 - L2 LINE L2 0 3272 3139 261 299 0 13 chr20 53269481 53269558 -18884324 - L2 LINE L2 -227 3045 2970 207 0 0 0 chr20 53269942 53269965 -18883917 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 287 224 158 0 chr20 53270002 53270078 -18883804 - MIR SINE MIR -88 120 33 582 318 19 28 chr20 53270165 53270376 -18883506 + MIR SINE MIR 6 214 -48 226 317 211 8 chr20 53270420 53270543 -18883339 - MIR SINE MIR -64 198 51 1841 125 42 14 chr20 53270579 53270867 -18883015 - AluSx SINE Alu -13 299 4 334 270 24 8 chr20 53271252 53271378 -18882504 - MIR SINE MIR -60 148 21 195 298 0 0 chr20 53271377 53271434 -18882448 - L2 LINE L2 -9 3263 3207 * 811 282 20 20 chr20 53271652 53271738 -18882144 + MIR SINE MIR 14 99 -163 1949 126 91 13 chr20 53271738 53272056 -18881826 + MER2 DNA MER2_type 1 343 -1 811 282 20 20 chr20 53272056 53272217 -18881665 + MIR SINE MIR 98 261 -1 21 0 0 0 chr20 53272966 53272987 -18880895 + AT_rich Low_complexity Low_complexity 1 21 0 357 353 67 0 chr20 53273480 53273630 -18880252 + MIR SINE MIR 67 226 -36 238 245 245 0 chr20 53273745 53273839 -18880043 - L2 LINE L2 0 3313 3197 232 309 92 70 chr20 53273896 53274168 -18879714 - L2 LINE L2 -4 3268 2991 550 255 116 19 chr20 53274297 53274513 -18879369 - MIR SINE MIR -6 256 20 270 252 174 26 chr20 53274793 53274908 -18878974 + MIR SINE MIR 119 250 -12 306 318 62 23 chr20 53275334 53275463 -18878419 - MIR SINE MIR -70 192 59 377 265 65 0 chr20 53275467 53275600 -18878282 + MIR SINE MIR 65 208 -54 242 274 155 0 chr20 53276286 53276370 -18877512 - MIR3 SINE MIR -27 181 85 191 302 0 0 chr20 53276585 53276628 -18877254 - MIR SINE MIR 0 262 220 444 301 32 21 chr20 53276875 53277061 -18876821 - MIR SINE MIR -39 223 36 224 286 54 54 chr20 53277199 53277311 -18876571 + MIR SINE MIR 131 242 -20 521 193 248 7 chr20 53277455 53277600 -18876282 + MER5A DNA MER1_type 10 189 0 219 311 90 38 chr20 53277675 53278007 -18875875 - L2 LINE L2 -211 3061 2585 193 375 34 0 chr20 53279705 53279793 -18874089 + MIR SINE MIR 31 121 -87 586 187 93 33 chr20 53280158 53280308 -18873574 - L2 LINE L2 0 3313 3155 1620 253 113 31 chr20 53280424 53281008 -18872874 - L2 LINE L2 -481 2833 2202 326 211 184 9 chr20 53280983 53281092 -18872790 - MIR3 SINE MIR -4 204 77 * 307 254 82 41 chr20 53281413 53281535 -18872347 - MIR SINE MIR -72 190 64 331 272 0 0 chr20 53281578 53281659 -18872223 - MIR SINE MIR -62 146 66 399 176 0 0 chr20 53282259 53282327 -18871555 - L2 LINE L2 -1 3312 3245 343 257 106 42 chr20 53282372 53282418 -18871464 + L1MC4 LINE L1 6611 6653 -1308 1756 131 7 11 chr20 53282418 53282692 -18871190 + AluSx SINE Alu 1 273 -39 213 39 0 0 chr20 53282692 53282718 -18871164 + (TC)n Simple_repeat Simple_repeat 2 27 0 318 26 0 0 chr20 53282722 53282761 -18871121 + (TAGA)n Simple_repeat Simple_repeat 4 42 0 343 257 106 42 chr20 53282761 53282913 -18870969 + L1MC4 LINE L1 6655 7782 -179 346 254 0 82 chr20 53282773 53282907 -18870975 - L1MCa LINE L1 -4362 2064 1942 2801 232 76 11 chr20 53282922 53283102 -18870780 - L2 LINE L2 -134 3179 3012 818 168 89 39 chr20 53283102 53283281 -18870601 - MER5A DNA MER1_type 0 189 2 2801 232 76 11 chr20 53283281 53284058 -18869824 - L2 LINE L2 -301 3012 2155 280 202 85 21 chr20 53284477 53284571 -18869311 - L2 LINE L2 -5 3267 3168 758 251 27 5 chr20 53284573 53284760 -18869122 + MER117 DNA MER1_type 2 192 -5 197 344 153 27 chr20 53284918 53285101 -18868781 - MIR SINE MIR -37 225 20 282 279 36 18 chr20 53285173 53285284 -18868598 - MIR SINE MIR -50 212 100 236 227 100 73 chr20 53285745 53285855 -18868027 - L2 LINE L2 -6 3266 3154 216 240 0 0 chr20 53285838 53285888 -18867994 + L2 LINE L2 3222 3271 -1 * 326 273 43 71 chr20 53286926 53287133 -18866749 - MIR SINE MIR -43 219 26 232 308 70 43 chr20 53287478 53287620 -18866262 - MIR SINE MIR -58 150 44 389 264 40 24 chr20 53287792 53287917 -18865965 + MIR SINE MIR 21 147 -115 506 237 47 7 chr20 53287933 53288100 -18865782 - MER5B DNA MER1_type -5 184 1 339 296 98 0 chr20 53288546 53288678 -18865204 - MIR SINE MIR -38 224 80 268 335 44 13 chr20 53288659 53288817 -18865065 + MIR SINE MIR 100 262 0 * 206 143 0 48 chr20 53288880 53288922 -18864960 + MIR SINE MIR 108 147 -115 666 229 19 19 chr20 53288926 53289083 -18864799 - MER63A DNA MER1_type 0 210 54 612 309 36 5 chr20 53289733 53289927 -18863955 - MIR SINE MIR 0 262 63 302 300 84 16 chr20 53289987 53290207 -18863675 + MIR3 SINE MIR 11 246 -16 195 100 0 0 chr20 53290831 53290861 -18863021 + (CCCCCA)n Simple_repeat Simple_repeat 5 34 0 305 350 43 0 chr20 53291439 53291579 -18862303 - MIR SINE MIR -88 174 29 201 82 0 115 chr20 53291907 53291968 -18861914 + (CGGGG)n Simple_repeat Simple_repeat 1 54 0 327 188 16 0 chr20 53292547 53292611 -18861271 - MIR SINE MIR -74 134 70 235 363 36 48 chr20 53292779 53292831 -18861051 - L2 LINE L2 -225 3047 2996 1788 149 11 0 chr20 53292831 53293179 -18860703 + AluJo SINE Alu 4 354 0 235 363 36 48 chr20 53293179 53293293 -18860589 - L2 LINE L2 -276 2996 2882 300 234 39 117 chr20 53293545 53293673 -18860209 - L1ME4a LINE L1 -2 6119 6002 1570 274 126 5 chr20 53293729 53294334 -18859548 - L1MC4a LINE L1 -1646 6162 5485 288 351 26 9 chr20 53294334 53294448 -18859434 - L2 LINE L2 -565 2749 2634 277 315 34 0 chr20 53294945 53295034 -18858848 + MIR SINE MIR 109 200 -62 * 747 299 19 97 chr20 53295033 53295258 -18858624 - L2 LINE L2 0 3313 3072 2191 119 3 0 chr20 53295258 53295568 -18858314 + AluSx SINE Alu 1 311 -1 747 299 19 97 chr20 53295568 53295622 -18858260 - L2 LINE L2 -241 3072 3015 1075 69 35 6 chr20 53295622 53295796 -18858086 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 747 299 19 97 chr20 53295796 53295926 -18857956 - L2 LINE L2 -298 3015 2935 313 316 150 0 chr20 53296936 53297085 -18856797 - L2 LINE L2 -12 3301 3086 252 289 155 10 chr20 53297093 53297190 -18856692 - L2 LINE L2 -2 3270 3160 606 248 57 6 chr20 53297277 53297434 -18856448 - MIR SINE MIR -70 192 28 1097 229 90 64 chr20 53297655 53298078 -18855804 + MLT1H LTR MaLR 3 436 -113 231 36 0 0 chr20 53298114 53298142 -18855740 + (A)n Simple_repeat Simple_repeat 1 28 0 549 249 195 43 chr20 53298142 53298536 -18855346 - MLT1H LTR MaLR -34 515 16 180 278 0 19 chr20 53298866 53298920 -18854962 + L2 LINE L2 3200 3252 -20 382 298 12 6 chr20 53299097 53299449 -18854433 + CT-rich Low_complexity Low_complexity 1 354 0 840 253 10 0 chr20 53299529 53299731 -18854151 + MIR SINE MIR 59 262 0 418 281 6 84 chr20 53299719 53299767 -18854115 - MIR SINE MIR -57 205 155 * 920 169 70 47 chr20 53299767 53299980 -18853902 + MER20 DNA MER1_type 2 219 0 418 281 6 84 chr20 53299980 53300109 -18853773 - MIR SINE MIR -107 155 42 188 122 24 0 chr20 53300314 53300355 -18853527 + (CA)n Simple_repeat Simple_repeat 2 43 0 180 228 18 53 chr20 53301048 53301105 -18852777 - MIR SINE MIR -72 136 82 2124 139 10 0 chr20 53301187 53301496 -18852386 + AluSx SINE Alu 1 312 0 302 221 0 25 chr20 53301520 53301683 -18852199 + (TG)n Simple_repeat Simple_repeat 1 159 0 328 329 0 6 chr20 53301696 53301857 -18852025 + (TG)n Simple_repeat Simple_repeat 1 160 0 240 226 0 0 chr20 53301889 53301982 -18851900 + (TG)n Simple_repeat Simple_repeat 1 93 0 361 300 0 0 chr20 53302014 53302240 -18851642 + (TG)n Simple_repeat Simple_repeat 1 226 0 210 150 50 0 chr20 53303713 53303753 -18850129 + CT-rich Low_complexity Low_complexity 3 44 0 1129 273 131 15 chr20 53303966 53304438 -18849444 - L1ME3A LINE L1 -220 5950 5424 492 333 85 23 chr20 53304479 53305020 -18848862 - L2 LINE L2 -41 3231 2660 1633 266 22 28 chr20 53305163 53305662 -18848220 + L2 LINE L2 2818 3313 0 477 239 19 63 chr20 53305726 53305885 -18847997 - MIR SINE MIR -13 249 98 367 244 193 0 chr20 53306566 53306685 -18847197 - MIR SINE MIR -111 151 10 463 264 58 19 chr20 53306731 53306886 -18846996 - MIR SINE MIR -74 188 28 332 298 179 28 chr20 53307029 53307247 -18846635 - L3 LINE CR1 -16 1561 1311 796 279 41 16 chr20 53307376 53307620 -18846262 - MIR SINE MIR -1 261 12 246 261 176 25 chr20 53307668 53307787 -18846095 - MIR SINE MIR -118 144 8 606 196 116 40 chr20 53308363 53308536 -18845346 + MIR SINE MIR 56 241 -21 209 309 87 16 chr20 53308581 53308707 -18845175 + MIR3 SINE MIR 33 167 -41 216 263 0 26 chr20 53309172 53309248 -18844634 + G-rich Low_complexity Low_complexity 1 74 0 2120 259 44 32 chr20 53309488 53310504 -18843378 + L2 LINE L2 2291 3311 -2 2149 86 14 0 chr20 53310518 53310809 -18843073 + AluSq SINE Alu 1 295 -18 33 25 0 0 chr20 53310809 53310849 -18843033 + AT_rich Low_complexity Low_complexity 1 40 0 187 328 35 0 chr20 53311275 53311333 -18842549 - L2 LINE L2 -8 3264 3205 413 223 58 0 chr20 53311364 53311467 -18842415 + MER91C DNA MER1_type 31 139 -1 313 300 94 19 chr20 53311527 53311687 -18842195 - L2 LINE L2 -209 3063 2892 280 284 55 0 chr20 53312286 53312395 -18841487 - L2 LINE L2 -13 3259 3145 888 256 137 12 chr20 53312557 53312893 -18840989 - L2 LINE L2 -38 3275 2898 417 321 15 0 chr20 53313062 53313199 -18840683 - MIR SINE MIR -111 151 13 561 284 109 12 chr20 53313891 53314164 -18839718 + MIR SINE MIR 1 262 0 541 204 76 15 chr20 53314702 53314834 -18839048 + MIR SINE MIR 21 160 -102 656 246 82 68 chr20 53314893 53314988 -18838894 - MIR SINE MIR -29 233 141 2229 107 0 3 chr20 53314988 53315298 -18838584 - AluSg SINE Alu -1 309 1 656 246 82 68 chr20 53315298 53315422 -18838460 - MIR SINE MIR -121 141 11 287 276 229 24 chr20 53315730 53315940 -18837942 - MIR SINE MIR -1 261 9 212 151 0 57 chr20 53316123 53316176 -18837706 + CT-rich Low_complexity Low_complexity 4 53 0 219 69 0 0 chr20 53316356 53316385 -18837497 + (GGA)n Simple_repeat Simple_repeat 3 31 0 195 203 203 31 chr20 53316537 53316601 -18837281 + MIR3 SINE MIR 109 183 -25 2514 44 0 0 chr20 53316758 53317055 -18836827 + AluY SINE Alu 1 297 -14 370 283 4 37 chr20 53317079 53317129 -18836753 + MIR SINE MIR 47 97 -134 564 275 63 32 chr20 53317129 53317318 -18836564 - MER91A DNA MER1_type 0 196 2 370 283 4 37 chr20 53317318 53317395 -18836487 + MIR SINE MIR 97 172 -59 339 264 23 0 chr20 53317412 53317499 -18836383 + L2 LINE L2 3184 3272 0 414 189 147 21 chr20 53317808 53317951 -18835931 - MIR SINE MIR -70 192 32 316 281 14 3 chr20 53317970 53318073 -18835809 - MIR SINE MIR -56 152 49 182 287 167 0 chr20 53318712 53318820 -18835062 + L2 LINE L2 2918 3043 -229 1770 147 0 23 chr20 53318829 53319135 -18834747 + AluJo SINE Alu 1 299 -13 2370 64 0 6 chr20 53319136 53319448 -18834434 + AluY SINE Alu 1 310 -1 292 143 29 29 chr20 53319454 53319524 -18834358 + GA-rich Low_complexity Low_complexity 2 71 0 413 206 151 16 chr20 53319543 53319669 -18834213 - MIR SINE MIR -42 220 78 1133 253 132 27 chr20 53320294 53321077 -18832805 - L2 LINE L2 -19 3294 2424 405 0 0 0 chr20 53321078 53321123 -18832759 + (TG)n Simple_repeat Simple_repeat 2 46 0 231 36 0 0 chr20 53322087 53322115 -18831767 + (TA)n Simple_repeat Simple_repeat 2 29 0 319 235 92 50 chr20 53322161 53322280 -18831602 - MIR SINE MIR -104 158 35 284 351 9 0 chr20 53322483 53322594 -18831288 + MIR SINE MIR 139 250 -12 305 285 78 39 chr20 53322609 53322808 -18831074 - MIR SINE MIR -39 223 18 1932 134 7 0 chr20 53322837 53323128 -18830754 + AluSx SINE Alu 1 293 -19 472 296 19 12 chr20 53323141 53323303 -18830579 - MIR SINE MIR -65 197 35 235 250 231 19 chr20 53324070 53324178 -18829704 + L2 LINE L2 3183 3313 0 188 305 110 12 chr20 53324234 53324316 -18829566 + MIR SINE MIR 54 143 -65 2227 93 0 0 chr20 53324381 53324672 -18829210 + AluSx SINE Alu 1 291 -21 230 203 0 87 chr20 53324674 53324743 -18829139 - MIR SINE MIR 0 262 200 813 154 7 14 chr20 53325395 53325538 -18828344 - FLAM_C SINE Alu 0 143 2 322 346 49 35 chr20 53325631 53325975 -18827907 - L2 LINE L2 -346 2968 2620 316 265 212 6 chr20 53325958 53326128 -18827754 + L3 LINE CR1 1255 1459 -118 * 189 196 0 0 chr20 53326813 53326864 -18827018 + C-rich Low_complexity Low_complexity 6 56 0 685 289 98 9 chr20 53327158 53327565 -18826317 - L2 LINE L2 0 3313 2761 200 256 23 58 chr20 53327572 53327658 -18826224 - L2 LINE L2 -211 3061 2979 481 302 111 0 chr20 53327668 53327840 -18826042 + MIR SINE MIR 2 192 -70 444 325 84 44 chr20 53328090 53328410 -18825472 + L2 LINE L2 2920 3252 -20 271 201 50 79 chr20 53328429 53328568 -18825314 - MIR3 SINE MIR -43 165 31 419 335 31 6 chr20 53329027 53329188 -18824694 + MIR3 SINE MIR 25 189 -19 340 197 0 0 chr20 53329478 53329544 -18824338 - MER5B DNA MER1_type -112 66 1 540 332 62 26 chr20 53330783 53330882 -18823000 - MIR SINE MIR 0 208 114 1032 39 78 0 chr20 53330882 53331011 -18822871 + MER85 DNA T2_type 1 139 0 540 332 62 26 chr20 53331011 53331289 -18822593 - MIR SINE MIR -94 114 4 219 299 35 0 chr20 53331526 53331613 -18822269 + MIR SINE MIR 117 206 -56 321 305 16 8 chr20 53331639 53331767 -18822115 + (TGG)n Simple_repeat Simple_repeat 3 131 0 344 138 0 38 chr20 53331778 53331858 -18822024 + (ATGGTG)n Simple_repeat Simple_repeat 3 79 0 293 167 65 19 chr20 53331912 53332020 -18821862 + (ATGGTG)n Simple_repeat Simple_repeat 1 113 0 301 188 10 30 chr20 53332095 53332196 -18821686 + (ATGGTG)n Simple_repeat Simple_repeat 3 101 0 242 341 0 0 chr20 53332209 53332294 -18821588 + (ATGGTG)n Simple_repeat Simple_repeat 5 89 0 1809 156 36 3 chr20 53333178 53333480 -18820402 - AluJb SINE Alu 0 312 1 1787 166 10 13 chr20 53333517 53333825 -18820057 - AluJo SINE Alu -5 307 1 478 270 14 15 chr20 53333846 53334017 -18819865 - MIR SINE MIR -60 148 12 1950 95 0 18 chr20 53334225 53334243 -18819639 - AluSx SINE Alu -14 298 281 339 65 0 0 chr20 53334243 53334289 -18819593 + (TG)n Simple_repeat Simple_repeat 1 46 0 202 29 57 0 chr20 53334291 53334326 -18819556 + (TTTG)n Simple_repeat Simple_repeat 1 37 0 1950 95 0 18 chr20 53334326 53334578 -18819304 - AluSx SINE Alu -32 280 30 239 197 131 0 chr20 53334587 53334648 -18819234 + MIR SINE MIR 108 176 -86 332 265 144 39 chr20 53334720 53334901 -18818981 - L2 LINE L2 -3 3310 3111 525 255 195 26 chr20 53334963 53335012 -18818870 - L2 LINE L2 -157 3156 3117 2038 137 0 0 chr20 53335012 53335319 -18818563 + AluSq SINE Alu 1 307 -6 525 255 195 26 chr20 53335319 53335571 -18818311 - L2 LINE L2 -196 3117 2804 1453 169 37 27 chr20 53335704 53335999 -18817883 + AluJo SINE Alu 14 311 -1 434 289 8 23 chr20 53337084 53337212 -18816670 + L2 LINE L2 3185 3310 -3 1904 159 10 3 chr20 53337294 53337782 -18816100 + AluSx SINE Alu 1 490 0 349 115 0 33 chr20 53337782 53337843 -18816039 + (GGAA)n Simple_repeat Simple_repeat 2 60 0 566 298 129 61 chr20 53337850 53338346 -18815536 + L2 LINE L2 2776 3308 -5 1543 177 23 37 chr20 53338346 53338456 -18815426 + AluJb SINE Alu 1 111 -201 351 0 0 0 chr20 53338456 53338495 -18815387 + (CA)n Simple_repeat Simple_repeat 2 40 0 1543 177 23 37 chr20 53338495 53338684 -18815198 + AluJb SINE Alu 111 296 -16 263 321 75 38 chr20 53338731 53338890 -18814992 + MIR SINE MIR 91 255 -7 274 263 50 0 chr20 53339435 53339534 -18814348 - L2 LINE L2 -237 3035 2932 501 256 145 0 chr20 53339600 53339772 -18814110 - MIR SINE MIR 0 262 66 189 0 0 0 chr20 53340814 53340835 -18813047 + (A)n Simple_repeat Simple_repeat 1 21 0 257 307 92 6 chr20 53341800 53341972 -18811910 - MIR SINE MIR -58 150 2 223 222 0 37 chr20 53342859 53342913 -18810969 + (TCCA)n Simple_repeat Simple_repeat 1 52 0 1285 264 83 7 chr20 53342974 53343405 -18810477 - L2 LINE L2 -872 2442 1979 302 269 124 102 chr20 53343444 53343592 -18810290 - L2 LINE L2 0 3272 3114 599 204 154 19 chr20 53343592 53343754 -18810128 - MER5A DNA MER1_type -2 187 4 302 269 124 102 chr20 53343754 53343880 -18810002 - L2 LINE L2 -158 3114 2992 312 250 173 0 chr20 53344108 53344212 -18809670 - L3 LINE CR1 -102 1475 1354 270 156 0 0 chr20 53344522 53344586 -18809296 + G-rich Low_complexity Low_complexity 4 67 0 268 311 180 12 chr20 53345324 53345485 -18808397 - MIR SINE MIR -12 250 63 * 1006 200 15 0 chr20 53345484 53345679 -18808203 + MIR SINE MIR 65 262 0 616 275 34 34 chr20 53346183 53346390 -18807492 + MIR SINE MIR 56 262 0 332 214 71 0 chr20 53346508 53346592 -18807290 - MIR SINE MIR -101 161 72 362 317 96 39 chr20 53346682 53346963 -18806919 - L2 LINE L2 -149 3123 2827 348 303 49 9 chr20 53347262 53347412 -18806470 - MIR SINE MIR -62 146 22 1703 176 30 0 chr20 53347657 53347863 -18806019 - AluJo SINE Alu 0 485 287 195 42 0 0 chr20 53347863 53347887 -18805995 + (TTTC)n Simple_repeat Simple_repeat 1 24 0 1703 176 30 0 chr20 53347887 53348156 -18805726 - AluJo SINE Alu -198 287 1 504 257 0 0 chr20 53348158 53348267 -18805615 + MIR SINE MIR 82 190 -72 729 220 82 11 chr20 53348281 53348463 -18805419 - MIR SINE MIR -39 223 29 185 263 35 0 chr20 53349204 53349261 -18804621 - MIR SINE MIR -11 251 193 211 284 127 75 chr20 53349303 53349437 -18804445 - MIR SINE MIR -42 220 80 200 337 21 11 chr20 53351204 53351299 -18802583 + MIR3 SINE MIR 13 108 -100 740 192 16 16 chr20 53351604 53351786 -18802096 - MER53 DNA DNA -7 182 1 220 349 47 0 chr20 53351794 53351880 -18802002 - L2 LINE L2 -601 2713 2624 1454 255 53 55 chr20 53351894 53352368 -18801514 + MLT1J LTR MaLR 37 509 -2 251 334 135 26 chr20 53352424 53352840 -18801042 - L2 LINE L2 -767 2547 2087 253 245 10 112 chr20 53352842 53352940 -18800942 + MIR3 SINE MIR 115 202 -6 * 522 318 30 25 chr20 53352913 53353114 -18800768 + MIR SINE MIR 59 260 -2 1687 192 146 26 chr20 53353574 53353804 -18800078 - MLT1C LTR MaLR 0 467 266 2160 93 7 0 chr20 53353804 53354138 -18799744 - AluSq SINE Alu 0 313 1 1687 192 146 26 chr20 53354138 53354324 -18799558 - MLT1C LTR MaLR -201 266 1 279 0 0 0 chr20 53354541 53354572 -18799310 + (CA)n Simple_repeat Simple_repeat 1 31 0 312 306 18 6 chr20 53354614 53354784 -18799098 + (CA)n Simple_repeat Simple_repeat 1 172 0 267 31 0 0 chr20 53355224 53355256 -18798626 + (CA)n Simple_repeat Simple_repeat 1 32 0 642 297 71 5 chr20 53356171 53356383 -18797499 - MIR SINE MIR -17 245 20 210 238 16 48 chr20 53356448 53356511 -18797371 + CT-rich Low_complexity Low_complexity 2 62 0 378 264 38 9 chr20 53357781 53357887 -18795995 + L2 LINE L2 3164 3272 0 231 238 38 88 chr20 53357929 53358009 -18795873 + L2 LINE L2 3187 3262 -10 524 284 60 32 chr20 53358609 53358827 -18795055 - MIR SINE MIR -12 250 27 205 222 0 0 chr20 53359067 53359103 -18794779 - MER91A DNA MER1_type -8 182 147 1406 252 50 18 chr20 53359255 53359695 -18794187 + MER113 DNA MER1_type? 1 454 -67 239 197 16 0 chr20 53359822 53359883 -18793999 + MIR SINE MIR 65 126 -82 785 182 40 34 chr20 53359968 53360144 -18793738 - MER58A DNA MER1_type -3 221 45 279 298 61 30 chr20 53360539 53360670 -18793212 + MIR SINE MIR 104 238 -24 317 294 71 16 chr20 53361230 53361356 -18792526 + MIR SINE MIR 50 182 -80 543 261 117 33 chr20 53361953 53362133 -18791749 + MIR SINE MIR 35 229 -33 648 235 26 47 chr20 53362294 53362409 -18791473 - MIR SINE MIR -1 261 149 1895 119 3 14 chr20 53362409 53362724 -18791158 - AluSx SINE Alu 0 312 1 648 235 26 47 chr20 53362724 53362800 -18791082 - MIR SINE MIR -113 149 73 1920 99 33 0 chr20 53362811 53363109 -18790773 + AluSg SINE Alu 1 307 0 317 211 0 0 chr20 53363111 53363168 -18790714 - MLT1F1 LTR MaLR -60 507 451 * 946 198 69 50 chr20 53363162 53363466 -18790416 - MLT1F1 LTR MaLR -241 304 3 315 266 0 0 chr20 53363468 53363532 -18790350 - MIR SINE MIR -181 81 18 308 320 183 26 chr20 53363574 53363918 -18789964 - L2 LINE L2 -71 3201 2804 594 271 133 52 chr20 53364077 53364498 -18789384 - L2 LINE L2 0 3313 2859 338 274 137 0 chr20 53365445 53365547 -18788335 + MIR SINE MIR 96 211 -51 231 290 234 0 chr20 53365563 53365670 -18788212 - MIR SINE MIR -12 250 119 600 192 34 27 chr20 53366244 53366390 -18787492 + MIR SINE MIR 17 163 -99 1582 138 26 8 chr20 53366405 53366673 -18787209 + AluJo SINE Alu 15 287 -25 2123 114 0 0 chr20 53366779 53367076 -18786806 + AluSx SINE Alu 1 297 -15 22 0 0 0 chr20 53367771 53367793 -18786089 + AT_rich Low_complexity Low_complexity 1 22 0 419 211 97 6 chr20 53367935 53368093 -18785789 - MIR SINE MIR -79 183 11 542 237 11 57 chr20 53368697 53368874 -18785008 + MIR SINE MIR 67 235 -27 2108 96 3 3 chr20 53368974 53369266 -18784616 + AluSx SINE Alu 2 293 -19 370 136 0 0 chr20 53369679 53369738 -18784144 + MADE1 DNA Mariner 1 59 -21 646 301 40 0 chr20 53370783 53370982 -18782900 + MIR SINE MIR 47 253 -9 1628 135 16 55 chr20 53370988 53371299 -18782583 + AluJo SINE Alu 1 299 -13 279 225 25 50 chr20 53371331 53371411 -18782471 - MIR3 SINE MIR -49 159 82 244 279 76 0 chr20 53371731 53371810 -18782072 - L3 LINE CR1 -89 1488 1404 291 314 110 8 chr20 53371938 53372056 -18781826 + L2 LINE L2 3123 3252 -20 834 208 94 5 chr20 53372073 53372265 -18781617 - MIR SINE MIR -1 261 53 402 259 49 56 chr20 53372356 53372499 -18781383 + L2 LINE L2 3128 3269 -3 1740 151 50 7 chr20 53372503 53372802 -18781080 + AluJo SINE Alu 1 312 0 343 233 198 0 chr20 53372898 53372984 -18780898 - MER91A DNA MER1_type -1 195 93 240 304 58 0 chr20 53373055 53373124 -18780758 - MER91A DNA MER1_type -123 73 1 405 207 126 18 chr20 53373817 53373928 -18779954 - L2 LINE L2 -10 3262 3140 374 276 94 16 chr20 53373936 53374063 -18779819 - L2 LINE L2 0 3272 3136 597 220 161 0 chr20 53374071 53374239 -18779643 - L2 LINE L2 -2 3311 3117 1375 102 0 0 chr20 53374276 53374453 -18779429 - AluSg/x SINE Alu -1 309 133 713 310 103 20 chr20 53374488 53374912 -18778970 + L2 LINE L2 2776 3235 -37 232 352 19 9 chr20 53374958 53375066 -18778816 - L2 LINE L2 -287 2985 2877 4576 156 31 16 chr20 53375270 53375321 -18778561 - L1MB7 LINE L1 0 6184 6135 2068 143 0 3 chr20 53375321 53375614 -18778268 - AluJo SINE Alu -20 292 1 4576 156 31 16 chr20 53375614 53376470 -18777412 - L1MB7 LINE L1 -49 6135 5264 272 189 44 22 chr20 53376497 53376587 -18777295 + MER113 DNA MER1_type? 127 218 -303 1678 288 175 17 chr20 53376590 53377745 -18776137 - L2 LINE L2 0 3313 1984 641 225 25 0 chr20 53378303 53378423 -18775459 - MIR SINE MIR -117 145 23 297 272 185 17 chr20 53378442 53378615 -18775267 - L3 LINE CR1 -48 1529 1328 427 298 195 5 chr20 53378647 53378852 -18775030 + MIR SINE MIR 7 250 -12 481 299 136 16 chr20 53381526 53381718 -18772164 + MIR SINE MIR 3 218 -44 448 149 7 209 chr20 53382170 53382238 -18771644 - MER5B DNA MER1_type 0 178 154 2251 107 7 3 chr20 53382238 53382536 -18771346 + AluSx SINE Alu 1 299 -13 448 149 7 209 chr20 53382536 53382615 -18771267 - MER5B DNA MER1_type -24 154 61 361 282 129 29 chr20 53382619 53382828 -18771054 + MIR SINE MIR 12 241 -21 279 315 0 55 chr20 53383431 53383596 -18770286 + G-rich Low_complexity Low_complexity 4 159 0 311 330 11 74 chr20 53383675 53383734 -18770148 + L1MC4a LINE L1 5769 5830 -1978 1826 139 43 4 chr20 53383734 53384015 -18769867 + AluJb SINE Alu 2 293 -19 311 330 11 74 chr20 53384015 53384131 -18769751 + L1MC4a LINE L1 5830 5933 -1875 2203 108 7 7 chr20 53385253 53385560 -18768322 - AluSq SINE Alu -6 307 1 356 226 128 37 chr20 53385591 53385632 -18768250 + Charlie8 DNA MER1_type 91 127 -2290 2360 84 0 10 chr20 53385632 53385931 -18767951 + AluY SINE Alu 1 296 -15 356 226 128 37 chr20 53385931 53386053 -18767829 + Charlie8 DNA MER1_type 127 269 -2148 553 271 133 20 chr20 53386142 53386345 -18767537 + MIR SINE MIR 20 245 -17 261 338 96 0 chr20 53386717 53386853 -18767029 - MIR3 SINE MIR -21 187 39 1071 262 78 16 chr20 53386951 53387336 -18766546 - LTR16C LTR ERVL -14 477 69 1941 113 4 7 chr20 53387366 53387641 -18766241 + AluSx SINE Alu 1 274 -38 243 0 0 0 chr20 53387650 53387677 -18766205 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 694 207 43 7 chr20 53387685 53387825 -18766057 + MER5A DNA MER1_type 1 145 -44 280 301 106 0 chr20 53387861 53387984 -18765898 + MIR3 SINE MIR 52 187 -21 372 94 0 0 chr20 53388034 53388087 -18765795 + (TTG)n Simple_repeat Simple_repeat 2 54 0 2251 96 4 0 chr20 53388089 53388370 -18765512 - AluSq SINE Alu -31 282 1 323 292 0 12 chr20 53388438 53388534 -18765348 - MIR SINE MIR -65 143 58 180 77 0 0 chr20 53388970 53388996 -18764886 + (TCCCC)n Simple_repeat Simple_repeat 2 27 0 416 229 76 15 chr20 53389213 53389344 -18764538 + MIR3 SINE MIR 11 149 -59 500 246 17 8 chr20 53389904 53390022 -18763860 - L1MC/D LINE L1 -2010 5798 5680 207 0 0 0 chr20 53391099 53391122 -18762760 + (A)n Simple_repeat Simple_repeat 1 23 0 498 317 60 15 chr20 53391401 53391801 -18762081 + Charlie8 DNA MER1_type 1 409 -2008 1176 216 45 57 chr20 53391801 53392222 -18761660 - MER96B DNA MER1_type 0 417 2 937 66 0 0 chr20 53392282 53392404 -18761478 - L1PA4 LINE L1 -3 6152 6031 517 218 53 8 chr20 53392494 53392627 -18761255 - MIR SINE MIR -89 173 35 1024 166 18 65 chr20 53393150 53393379 -18760503 - MER20 DNA MER1_type -1 218 1 191 311 49 0 chr20 53393391 53393452 -18760430 - L2 LINE L2 -219 3053 2990 2476 81 0 13 chr20 53393855 53394163 -18759719 - AluSc SINE Alu -5 304 1 264 171 281 37 chr20 53394206 53394288 -18759594 - MIR SINE MIR -53 209 108 1934 49 0 5 chr20 53394360 53394584 -18759298 + AluY SINE Alu 1 223 -88 2165 99 7 7 chr20 53394788 53395081 -18758801 - AluSq SINE Alu -20 293 1 464 231 156 59 chr20 53397782 53397968 -18755914 - MIR3 SINE MIR -3 205 2 926 241 96 28 chr20 53397996 53398017 -18755865 + MER113 DNA MER1_type? 104 122 -399 2247 128 0 0 chr20 53398017 53398315 -18755567 - AluSx SINE Alu -14 298 1 926 241 96 28 chr20 53398315 53398646 -18755236 + MER113 DNA MER1_type? 122 480 -41 660 262 124 24 chr20 53398667 53398877 -18755005 + MIR SINE MIR 20 250 -12 522 278 62 8 chr20 53399267 53399470 -18754412 + MIR SINE MIR 19 249 -13 204 234 0 16 chr20 53401358 53401422 -18752460 + (TCCA)n Simple_repeat Simple_repeat 1 63 0 2419 93 3 0 chr20 53401453 53401764 -18752118 + AluSx SINE Alu 1 312 0 1775 140 10 52 chr20 53401781 53402089 -18751793 + AluJo SINE Alu 1 295 -17 186 118 0 0 chr20 53402218 53402252 -18751630 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2417 83 6 10 chr20 53402259 53402571 -18751311 - AluSx SINE Alu -1 311 1 211 304 156 37 chr20 53402617 53402752 -18751130 + MIR3 SINE MIR 43 193 -15 271 309 148 54 chr20 53402846 53403480 -18750402 + L2 LINE L2 2501 3189 -83 192 77 0 0 chr20 53403520 53403546 -18750336 + (TGAA)n Simple_repeat Simple_repeat 1 26 0 22 35 0 0 chr20 53403923 53403952 -18749930 + AT_rich Low_complexity Low_complexity 1 29 0 339 246 8 74 chr20 53404573 53404695 -18749187 + L2 LINE L2 2941 3054 -218 250 320 66 25 chr20 53405843 53405965 -18747917 + L2 LINE L2 3143 3269 -3 491 289 69 23 chr20 53406425 53406643 -18747239 + L2 LINE L2 2919 3146 -167 673 244 6 6 chr20 53406822 53406978 -18746904 + MLT1F1 LTR MaLR 1 156 -386 666 210 8 8 chr20 53406987 53407111 -18746771 + FLAM_C SINE Alu 2 125 -18 741 78 82 0 chr20 53407159 53407478 -18746404 + CT-rich Low_complexity Low_complexity 1 345 0 1252 189 97 38 chr20 53407512 53407851 -18746031 + MLT1F1 LTR MaLR 209 567 0 826 174 0 0 chr20 53408619 53408751 -18745131 - FRAM SINE Alu 0 40 1 885 324 63 12 chr20 53408870 53409456 -18744426 - L1MC4a LINE L1 -1911 5897 5282 192 244 0 0 chr20 53409463 53409504 -18744378 - L2 LINE L2 0 3313 3273 2214 133 6 32 chr20 53409625 53409971 -18743911 - MER1B DNA MER1_type 0 337 1 1450 226 55 42 chr20 53410113 53410547 -18743335 + LTR16C LTR ERVL 38 477 -14 387 299 175 0 chr20 53410608 53410762 -18743120 + MIR SINE MIR 15 195 -67 223 259 17 0 chr20 53410805 53410863 -18743019 - MIR SINE MIR -68 140 82 883 240 29 15 chr20 53411002 53411206 -18742676 + MER3 DNA MER1_type 3 209 0 868 163 0 0 chr20 53411226 53411355 -18742527 + FLAM_C SINE Alu 1 129 -4 393 313 69 0 chr20 53412192 53412323 -18741559 + MIR SINE MIR 49 188 -74 2167 112 18 0 chr20 53412327 53412612 -18741270 - AluSg SINE Alu -20 290 1 782 209 28 28 chr20 53412629 53412811 -18741071 + MIR SINE MIR 62 243 -19 2047 188 32 22 chr20 53412872 53413334 -18740548 - Charlie4a DNA MER1_type -3 505 39 1160 243 25 0 chr20 53413525 53413764 -18740118 - MIR SINE MIR -15 247 3 293 211 78 11 chr20 53413805 53413895 -18739987 - MLT1C LTR MaLR -284 183 88 704 295 153 14 chr20 53413965 53414395 -18739487 - L2 LINE L2 -338 2976 2487 659 212 192 36 chr20 53414412 53414698 -18739184 + MLT1G LTR MaLR 1 301 -289 29 0 0 0 chr20 53415012 53415041 -18738841 + AT_rich Low_complexity Low_complexity 1 29 0 2063 134 16 10 chr20 53415569 53415875 -18738007 + AluSx SINE Alu 3 310 -2 1612 173 50 85 chr20 53416064 53416485 -18737397 - MLT1D LTR MaLR -79 388 1 547 313 53 18 chr20 53416964 53417191 -18736691 - MIR SINE MIR -16 246 12 2303 107 7 0 chr20 53417446 53417744 -18736138 - AluSq SINE Alu -13 300 1 1677 142 15 36 chr20 53417889 53418219 -18735663 + L1MC4 LINE L1 7431 7753 -289 2118 125 0 34 chr20 53418316 53418637 -18735245 - AluSg SINE Alu 0 310 1 402 175 0 0 chr20 53418644 53418724 -18735158 + CT-rich Low_complexity Low_complexity 1 80 0 953 188 18 6 chr20 53418724 53418894 -18734988 - AluJ SINE Alu -20 292 121 849 156 0 15 chr20 53419626 53419761 -18734121 - AluJ SINE Alu -167 145 13 231 151 0 19 chr20 53419776 53419829 -18734053 + L1MC4 LINE L1 7984 8035 -7 358 263 0 0 chr20 53420082 53420162 -18733720 + MIR SINE MIR 84 163 -99 576 285 75 45 chr20 53420163 53420815 -18733067 + L1ME2 LINE L1 5052 5683 -481 2202 105 16 19 chr20 53420815 53421129 -18732753 + AluSq SINE Alu 1 313 0 576 285 75 45 chr20 53421129 53421222 -18732660 + L1ME2 LINE L1 5683 5772 -392 919 209 81 0 chr20 53421222 53421394 -18732488 - MER5A DNA MER1_type 0 189 4 576 285 75 45 chr20 53421394 53421480 -18732402 + L1ME2 LINE L1 5772 5912 -252 1727 150 17 28 chr20 53421567 53421854 -18732028 + AluJo SINE Alu 14 297 -15 2334 117 0 0 chr20 53421938 53422247 -18731635 - AluSq SINE Alu -4 309 1 201 267 0 0 chr20 53422383 53422428 -18731454 + MIR SINE MIR 153 197 -65 28 0 0 0 chr20 53422499 53422527 -18731355 + AT_rich Low_complexity Low_complexity 1 28 0 * 448 227 70 3 chr20 53422508 53422536 -18731346 + HAL1b LINE L1 906 931 -417 1982 169 0 0 chr20 53422536 53422844 -18731038 + AluJb SINE Alu 1 308 -4 448 227 70 3 chr20 53422844 53422955 -18730927 + HAL1b LINE L1 931 1051 -297 609 132 105 0 chr20 53422958 53423072 -18730810 + MER53 DNA DNA 1 126 -63 1643 194 0 0 chr20 53423078 53423372 -18730510 - AluJo SINE Alu -8 304 11 291 247 55 84 chr20 53423528 53423677 -18730205 + MIR SINE MIR 9 151 -57 359 235 139 0 chr20 53423687 53423802 -18730080 - MIR SINE MIR -15 247 117 383 296 46 0 chr20 53423809 53423917 -18729965 + L2 LINE L2 3200 3312 -1 279 257 0 43 chr20 53423919 53423989 -18729893 - MIR SINE MIR -167 95 29 897 208 35 5 chr20 53424012 53424214 -18729668 - L1ME3 LINE L1 -2 6160 5953 2188 82 24 0 chr20 53424344 53424635 -18729247 + AluSg SINE Alu 1 298 -12 1519 114 14 9 chr20 53424686 53424906 -18728976 + AluJb SINE Alu 1 221 -91 25 31 0 0 chr20 53424935 53424967 -18728915 + AT_rich Low_complexity Low_complexity 1 32 0 180 0 0 0 chr20 53425065 53425085 -18728797 + (A)n Simple_repeat Simple_repeat 1 20 0 329 264 142 32 chr20 53425706 53425861 -18728021 + MIR SINE MIR 1 172 -90 8520 116 109 27 chr20 53425861 53427421 -18726461 - pTR5 LTR ERV1 0 2438 751 324 180 169 34 chr20 53427421 53427510 -18726372 + MIR SINE MIR 161 261 -1 231 350 136 0 chr20 53427612 53427752 -18726130 + L2 LINE L2 3140 3298 -15 291 329 43 43 chr20 53428068 53428275 -18725607 + L2 LINE L2 3107 3313 0 417 285 109 82 chr20 53429163 53429531 -18724351 - L1M2 LINE L1 -5719 1130 753 228 226 38 105 chr20 53430030 53430163 -18723719 + MER113 DNA MER1_type? 52 175 -346 279 133 0 0 chr20 53431094 53431139 -18722743 + (TATATG)n Simple_repeat Simple_repeat 4 48 0 2119 98 57 3 chr20 53431326 53431622 -18722260 - AluSp SINE Alu -1 312 1 267 309 32 24 chr20 53431966 53432089 -18721793 - MIR SINE MIR -64 198 75 404 224 86 26 chr20 53432122 53432238 -18721644 + MER103 DNA DNA 3 125 -41 945 155 58 23 chr20 53432920 53433094 -18720788 + AluJb SINE Alu 1 180 -132 209 311 151 36 chr20 53433359 53433584 -18720298 + L2 LINE L2 2810 3060 -212 1798 140 14 4 chr20 53433771 53434049 -18719833 + AluJo SINE Alu 1 281 -31 262 224 149 28 chr20 53434055 53434162 -18719720 + L2 LINE L2 3193 3312 -1 724 303 56 16 chr20 53434781 53435032 -18718850 + MIR SINE MIR 2 262 0 1531 157 77 14 chr20 53435541 53435973 -18717909 - LTR54 LTR ERV1 0 510 1 23 33 0 0 chr20 53438563 53438593 -18715289 + AT_rich Low_complexity Low_complexity 1 30 0 27 0 0 0 chr20 53439056 53439083 -18714799 + AT_rich Low_complexity Low_complexity 1 27 0 23 0 0 0 chr20 53441766 53441789 -18712093 + AT_rich Low_complexity Low_complexity 1 23 0 1850 136 28 7 chr20 53441888 53442175 -18711707 + AluJb SINE Alu 1 293 -19 710 329 60 60 chr20 53446126 53446599 -18707283 - L2 LINE L2 -4 3268 2724 1088 171 0 12 chr20 53446599 53446769 -18707113 + FAM SINE Alu 1 168 -7 710 329 60 60 chr20 53446769 53447142 -18706740 - L2 LINE L2 -548 2724 2353 192 135 0 0 chr20 53447919 53447956 -18705926 + (T)n Simple_repeat Simple_repeat 1 37 0 185 260 142 16 chr20 53448929 53449056 -18704826 + L2 LINE L2 3171 3313 0 3120 171 64 18 chr20 53449072 53449349 -18704533 + L1MB4 LINE L1 5481 5744 -436 1863 156 24 7 chr20 53449349 53449637 -18704245 - AluJb SINE Alu -12 300 8 3120 171 64 18 chr20 53449637 53449986 -18703896 + L1MB4 LINE L1 5744 6136 -44 892 110 22 37 chr20 53449986 53450122 -18703760 + AluSq/x SINE Alu 1 134 -179 197 351 0 0 chr20 53450232 53450306 -18703576 - MIR SINE MIR 0 262 189 1936 166 0 10 chr20 53450865 53451178 -18702704 + AluJb SINE Alu 2 311 -1 43 71 0 0 chr20 53451416 53451501 -18702381 + AT_rich Low_complexity Low_complexity 1 85 0 590 274 58 45 chr20 53451535 53451758 -18702124 + L1ME LINE L1 5412 5637 -484 22 35 0 0 chr20 53451761 53451790 -18702092 + AT_rich Low_complexity Low_complexity 1 29 0 1459 285 65 12 chr20 53452158 53452638 -18701244 - MLT1K LTR MaLR -2 586 82 241 324 48 19 chr20 53453106 53453211 -18700671 - MIR SINE MIR -1 261 154 294 338 26 46 chr20 53453400 53453551 -18700331 - MIR SINE MIR -111 151 4 220 231 150 82 chr20 53453591 53453738 -18700144 + MIR3 SINE MIR 4 160 -48 913 206 70 15 chr20 53454288 53454487 -18699395 + MER63A DNA MER1_type 1 210 0 204 306 45 45 chr20 53554862 53554973 -18598909 - MIR SINE MIR -142 120 10 203 270 16 0 chr20 53555725 53555788 -18598094 + MIR SINE MIR 74 137 -71 626 191 39 87 chr20 53556337 53556568 -18597314 + L2 LINE L2 2932 3151 -162 3733 138 27 19 chr20 53556568 53557198 -18596684 + MER41B LTR ERV1 1 635 0 396 265 7 41 chr20 53557210 53557357 -18596525 + L2 LINE L2 3172 3313 0 204 310 84 29 chr20 53557485 53557704 -18596178 - MIR SINE MIR -16 246 16 2113 72 21 98 chr20 53557737 53558072 -18595810 - AluY SINE Alu -2 309 1 982 81 0 0 chr20 53558110 53558233 -18595649 - AluY SINE Alu -188 123 1 200 369 103 39 chr20 53558233 53558623 -18595259 + L2 LINE L2 2453 2867 -447 * 390 333 7 7 chr20 53558615 53558765 -18595117 - L2 LINE L2 -5 3308 3159 1657 283 71 22 chr20 53559398 53560091 -18593791 - MER20B DNA MER1_type -56 727 1 306 239 154 8 chr20 53560414 53560544 -18593338 + L1 LINE L1 3048 3196 -2950 541 280 265 22 chr20 53561026 53561294 -18592588 - MLT1J LTR MaLR -175 336 4 510 353 67 8 chr20 53561999 53562328 -18591554 - L1MC/D LINE L1 -506 5658 5370 404 289 0 0 chr20 53562335 53562439 -18591443 + MIR SINE MIR 147 250 -12 204 162 81 0 chr20 53562499 53562536 -18591346 + MIR SINE MIR 212 251 -11 848 165 0 0 chr20 53563069 53563196 -18590686 + AluJb SINE Alu 1 127 -185 657 235 70 15 chr20 53563742 53563942 -18589940 - MIR SINE MIR -19 243 33 1827 136 11 17 chr20 53564647 53564934 -18588948 - AluSp SINE Alu -27 286 2 392 224 119 63 chr20 53564939 53565035 -18588847 - MIR SINE MIR -65 197 89 874 224 14 31 chr20 53565035 53565258 -18588624 - MER20 DNA MER1_type 0 219 1 392 224 119 63 chr20 53565258 53565304 -18588578 - MIR SINE MIR -173 89 47 1458 215 10 16 chr20 53565468 53565779 -18588103 - AluJo SINE Alu -3 309 1 480 253 69 87 chr20 53565789 53566114 -18587768 + L2 LINE L2 2697 3025 -288 23 0 0 0 chr20 53566327 53566350 -18587532 + GC_rich Low_complexity Low_complexity 1 23 0 220 276 15 52 chr20 53566361 53566495 -18587387 + C-rich Low_complexity Low_complexity 2 130 0 1988 166 0 6 chr20 53566618 53566932 -18586950 - AluJo SINE Alu 0 312 1 307 333 73 15 chr20 53567014 53567275 -18586607 - L1ME LINE L1 -287 5834 5559 593 162 74 14 chr20 53567833 53567981 -18585901 - MER58 DNA MER1_type -1 2419 2263 * 754 235 34 0 chr20 53567970 53568149 -18585733 - MER58 DNA MER1_type -156 185 1 282 318 70 8 chr20 53569021 53569150 -18584732 + MIR SINE MIR 65 201 -61 946 197 36 0 chr20 53569156 53569349 -18584533 - MER20 DNA MER1_type 0 219 20 558 187 0 57 chr20 53569454 53569553 -18584329 - MIR SINE MIR -105 157 65 2267 82 12 61 chr20 53569553 53569881 -18584001 + AluSx SINE Alu 1 312 0 558 187 0 57 chr20 53569881 53569904 -18583978 - MIR SINE MIR -197 65 42 437 253 23 37 chr20 53570111 53570241 -18583641 + MIR SINE MIR 21 145 -63 796 273 25 16 chr20 53570266 53570508 -18583374 + MIR SINE MIR 15 258 -4 286 246 0 0 chr20 53570998 53571059 -18582823 - MIR SINE MIR -108 154 94 219 266 141 31 chr20 53571431 53571559 -18582323 + MIR3 SINE MIR 13 154 -54 888 300 68 29 chr20 53571657 53572110 -18581772 - L2 LINE L2 -4 3309 2839 2005 188 84 25 chr20 53572113 53572634 -18581248 + MER74A LTR ERVL 7 558 0 249 316 129 34 chr20 53572672 53572881 -18581001 + MIR SINE MIR 28 256 -6 350 329 45 0 chr20 53573292 53573447 -18580435 + MIR SINE MIR 67 228 -34 1202 257 34 87 chr20 53573455 53573984 -18579898 - L2 LINE L2 -1 3312 2812 1731 183 21 0 chr20 53574152 53574436 -18579446 + AluJb SINE Alu 1 290 -22 288 272 136 8 chr20 53574475 53574600 -18579282 + MIR3 SINE MIR 19 159 -49 499 266 35 0 chr20 53574633 53574776 -18579106 - MIR SINE MIR -2 260 113 425 319 25 0 chr20 53574931 53575088 -18578794 - MIR SINE MIR -53 209 49 2088 214 52 10 chr20 53575297 53575782 -18578100 - MLT1D LTR MaLR 0 505 1 833 250 54 82 chr20 53575975 53576399 -18577483 - MER113 DNA MER1_type? -94 427 16 489 259 44 6 chr20 53576663 53576821 -18577061 + MIR SINE MIR 74 237 -25 264 163 0 0 chr20 53577053 53577106 -18576776 + MIR SINE MIR 102 154 -54 201 295 57 9 chr20 53577156 53577261 -18576621 - MIR SINE MIR -61 201 92 673 259 65 11 chr20 53577431 53577616 -18576266 - MER91A DNA MER1_type -1 195 1 318 87 0 22 chr20 53578604 53578650 -18575232 + MER75 DNA T2_type 459 503 -1 1835 145 0 0 chr20 53579026 53579295 -18574587 + AluJb SINE Alu 14 282 -30 447 19 0 0 chr20 53579306 53579358 -18574524 + (CA)n Simple_repeat Simple_repeat 1 52 0 597 251 37 37 chr20 53579378 53579569 -18574313 + MIR SINE MIR 58 248 -14 456 227 144 0 chr20 53579697 53579829 -18574053 + MER69A DNA AcHobo 27 177 0 485 303 73 5 chr20 53580649 53580867 -18573015 + MIR SINE MIR 20 252 -10 658 232 12 6 chr20 53580916 53581084 -18572798 - MIR SINE MIR -15 247 79 1682 147 53 0 chr20 53581175 53581440 -18572442 + AluJo SINE Alu 2 280 -32 215 262 0 48 chr20 53582067 53582151 -18571731 + MIR SINE MIR 73 152 -110 524 239 128 41 chr20 53582157 53582273 -18571609 + MIR SINE MIR 16 120 -142 2792 83 0 5 chr20 53582273 53582646 -18571236 + L1PA13 LINE L1 5788 6158 -5 524 239 128 41 chr20 53582646 53582747 -18571135 + MIR SINE MIR 120 252 -10 1876 100 41 75 chr20 53582765 53583085 -18570797 - AluSg SINE Alu -1 309 1 2227 203 19 19 chr20 53583130 53583751 -18570131 - L1MC/D LINE L1 -577 6059 5434 1608 39 0 39 chr20 53583751 53583956 -18569926 + MER107 DNA MER1_type 1 197 0 2227 203 19 19 chr20 53583956 53583975 -18569907 - L1MC/D LINE L1 -1202 5434 5417 * 3960 143 58 20 chr20 53583957 53584692 -18569190 - L1MB3 LINE L1 -123 6060 5298 938 178 84 22 chr20 53584697 53584922 -18568960 - L1MC/D LINE L1 -4169 2371 2133 2196 117 0 3 chr20 53584922 53585221 -18568661 - AluSq SINE Alu -15 298 1 1752 150 72 42 chr20 53585222 53585608 -18568274 - L1MC/D LINE L1 -4532 2008 1611 593 218 0 6 chr20 53585609 53585765 -18568117 + (TA)n Simple_repeat Simple_repeat 2 156 0 719 95 0 0 chr20 53585769 53585864 -18568018 - MSTA LTR MaLR -60 368 274 203 136 30 30 chr20 53585866 53585932 -18567950 + (TA)n Simple_repeat Simple_repeat 1 66 0 977 114 7 20 chr20 53585959 53586108 -18567774 - L1M3 LINE L1 -377 5806 5660 29 70 0 0 chr20 53586116 53586173 -18567709 + AT_rich Low_complexity Low_complexity 1 57 0 280 143 71 0 chr20 53586185 53586297 -18567585 + (CTATA)n Simple_repeat Simple_repeat 2 121 0 303 191 21 53 chr20 53586305 53586399 -18567483 + L1MC4 LINE L1 6614 6704 -1338 317 133 62 16 chr20 53586413 53586541 -18567341 + (CTATA)n Simple_repeat Simple_repeat 2 135 0 226 214 48 39 chr20 53586541 53586644 -18567238 + (TACTG)n Simple_repeat Simple_repeat 4 107 0 414 162 48 19 chr20 53586666 53586985 -18566897 + (CTATA)n Simple_repeat Simple_repeat 1 328 0 1414 189 69 35 chr20 53587041 53587417 -18566465 - L1MC/D LINE L1 -4926 1614 1226 282 111 0 56 chr20 53587464 53587518 -18566364 + AluSx SINE Alu 83 133 -169 1071 125 25 12 chr20 53587617 53587777 -18566105 + AluSx SINE Alu 133 294 -16 1548 219 59 25 chr20 53587778 53588006 -18565876 - L1MC/D LINE L1 -5432 1108 860 2171 144 98 5 chr20 53588006 53588394 -18565488 - MSTB LTR MaLR -2 424 1 1548 219 59 25 chr20 53588394 53588557 -18565325 - L1MC/D LINE L1 -5680 860 704 1073 264 26 24 chr20 53588562 53588903 -18564979 + L1ME1 LINE L1 5820 6161 -5 919 118 0 0 chr20 53588924 53589043 -18564839 + FLAM_C SINE Alu 1 119 -24 1622 241 29 18 chr20 53589144 53589822 -18564060 - L1MCc LINE L1 -3597 3344 2696 1843 160 6 28 chr20 53589825 53590144 -18563738 + AluJb SINE Alu 1 312 0 594 259 61 25 chr20 53590251 53590448 -18563434 - MER63A DNA MER1_type -6 204 1 1737 251 64 83 chr20 53590457 53591661 -18562221 - L1MCc LINE L1 -4500 2622 1232 404 285 35 60 chr20 53592435 53592719 -18561163 - L1MCc LINE L1 -6130 293 17 719 159 23 38 chr20 53593398 53593530 -18560352 + AluJ SINE Alu 1 130 -172 2013 148 3 7 chr20 53593552 53593850 -18560032 + AluJo SINE Alu 1 297 -15 1016 236 52 4 chr20 53593970 53594220 -18559662 - MIR SINE MIR 0 262 1 839 151 72 12 chr20 53594443 53594609 -18559273 - MER5B DNA MER1_type -2 176 1 587 302 111 40 chr20 53594880 53595434 -18558448 - L2 LINE L2 -20 3293 2702 281 169 0 34 chr20 53595434 53595493 -18558389 - L1MB8 LINE L1 0 6178 6122 1104 164 0 0 chr20 53595505 53595670 -18558212 + AluJ SINE Alu 132 296 -16 3762 168 20 8 chr20 53595673 53596335 -18557547 - L1MB8 LINE L1 -58 6120 5451 491 285 22 0 chr20 53596351 53596488 -18557394 - L2 LINE L2 -700 2614 2475 934 269 72 36 chr20 53596521 53596834 -18557048 - MER113 DNA MER1_type? -1 520 181 2042 153 0 7 chr20 53596834 53597194 -18556688 - AluJb SINE Alu 0 312 1 934 269 72 36 chr20 53597194 53597378 -18556504 - MER113 DNA MER1_type? -340 181 5 276 206 15 0 chr20 53597920 53597988 -18555894 - MIR SINE MIR -25 237 169 183 269 151 11 chr20 53598036 53598129 -18555753 + MIR SINE MIR 53 158 -104 7824 115 75 2 chr20 53598138 53599319 -18554563 + Tigger1 DNA MER2_type 26 1292 -1126 350 242 55 0 chr20 53599400 53599491 -18554391 - MIR SINE MIR -114 148 53 398 275 51 7 chr20 53599744 53599882 -18554000 - MIR SINE MIR -12 250 107 492 174 12 0 chr20 53600245 53600331 -18553551 + Tigger5 DNA MER2_type 2237 2323 0 669 235 92 25 chr20 53600555 53600751 -18553131 + MLT1J LTR MaLR 107 315 -196 513 218 121 68 chr20 53600760 53601173 -18552709 + MLT1H LTR MaLR 20 501 -54 258 284 57 23 chr20 53601209 53601297 -18552585 + MLT1L LTR MaLR 392 482 -133 1434 285 56 2 chr20 53601446 53601857 -18552025 + LTR16A LTR ERVL 18 450 0 302 246 26 50 chr20 53602003 53602153 -18551729 - LTR16A LTR ERVL -76 374 184 469 248 38 23 chr20 53602781 53602914 -18550968 - L2 LINE L2 0 3272 3138 1866 253 84 4 chr20 53602932 53603431 -18550451 + MLT1H1 LTR MaLR 1 539 -16 237 263 61 20 chr20 53603446 53603545 -18550337 + MIR SINE MIR 79 181 -81 209 180 40 0 chr20 53603713 53603763 -18550119 - MIR SINE MIR -12 250 199 311 257 84 84 chr20 53603836 53604062 -18549820 + L2 LINE L2 2886 3111 -202 672 262 50 23 chr20 53604267 53604488 -18549394 - L2 LINE L2 -5 3308 3082 291 28 0 0 chr20 53604995 53605031 -18548851 + (TG)n Simple_repeat Simple_repeat 2 37 0 949 262 100 20 chr20 53605115 53605566 -18548316 - L2 LINE L2 0 3313 2827 2053 130 0 55 chr20 53605606 53605936 -18547946 - AluSx SINE Alu 0 312 1 910 145 28 45 chr20 53605957 53606136 -18547746 - FRAM SINE Alu 0 40 1 251 299 98 18 chr20 53606137 53606301 -18547581 - L2 LINE L2 -596 2718 2542 2120 114 24 0 chr20 53606307 53606597 -18547285 - AluSx SINE Alu -15 297 1 638 250 20 20 chr20 53606601 53606801 -18547081 - L1ME3A LINE L1 -5 6165 5966 997 140 0 0 chr20 53606802 53606945 -18546937 - FLAM_C SINE Alu 0 143 1 180 111 0 0 chr20 53606947 53606974 -18546908 + (TTTTC)n Simple_repeat Simple_repeat 2 28 0 861 135 0 8 chr20 53607008 53607141 -18546741 - FRAM SINE Alu -44 132 1 218 311 98 18 chr20 53607142 53607306 -18546576 - L2 LINE L2 -596 2718 2542 2113 110 24 0 chr20 53607312 53607602 -18546280 - AluSx SINE Alu -15 297 1 676 238 19 24 chr20 53607606 53607812 -18546070 - L1ME3A LINE L1 -5 6165 5961 461 275 30 38 chr20 53607813 53608049 -18545833 - L2 LINE L2 -777 2537 2304 588 232 156 46 chr20 53608100 53608337 -18545545 - Charlie8 DNA MER1_type -2047 370 108 367 284 40 40 chr20 53608459 53608607 -18545275 - MIR3 SINE MIR -48 160 13 367 292 104 84 chr20 53608738 53609136 -18544746 - MLT1L LTR MaLR 0 615 207 2510 136 31 14 chr20 53609136 53609555 -18544327 + MSTB LTR MaLR 1 426 0 367 292 104 84 chr20 53609555 53609570 -18544312 - MLT1L LTR MaLR -408 207 194 996 107 0 8 chr20 53609665 53609796 -18544086 + AluSq/x SINE Alu 1 130 -183 1818 59 5 5 chr20 53609796 53610015 -18543867 + AluY SINE Alu 74 292 -19 2009 134 3 3 chr20 53610029 53610313 -18543569 + AluSx SINE Alu 14 297 -15 354 263 11 11 chr20 53610352 53610447 -18543435 + MIR SINE MIR 66 160 -102 489 204 28 9 chr20 53610517 53610625 -18543257 + MER5A DNA MER1_type 20 129 -60 850 249 97 79 chr20 53610821 53611263 -18542619 + LTR16A LTR ERVL 1 450 0 292 282 18 9 chr20 53611263 53611373 -18542509 - MIR SINE MIR -78 184 74 187 210 188 62 chr20 53611316 53611492 -18542390 - L2 LINE L2 -467 2847 2650 * 207 228 18 18 chr20 53611672 53611729 -18542153 + L2 LINE L2 3216 3272 0 207 254 0 36 chr20 53611775 53611885 -18541997 + GA-rich Low_complexity Low_complexity 1 106 0 2310 140 57 20 chr20 53612018 53612431 -18541451 - MSTC LTR MaLR 0 428 1 478 167 176 0 chr20 53612492 53612594 -18541288 + MER96B DNA MER1_type? 3 122 -295 317 136 186 0 chr20 53612594 53612653 -18541229 + MER58A DNA MER1_type 7 76 -31 423 181 24 0 chr20 53612952 53613035 -18540847 + MIR SINE MIR 60 144 -118 296 165 211 28 chr20 53613086 53613195 -18540687 + MIR SINE MIR 46 174 -88 1670 206 56 86 chr20 53613537 53614167 -18539715 + LTR9 LTR ERV1 1 611 -1 423 264 190 14 chr20 53614229 53614513 -18539369 + L2 LINE L2 2566 2899 -415 2637 86 36 0 chr20 53614706 53615068 -18538814 - THE1C LTR MaLR 0 375 1 395 261 188 5 chr20 53615301 53615490 -18538392 + MIR SINE MIR 16 245 -17 1002 187 52 20 chr20 53615665 53615916 -18537966 + L1M4 LINE L1 2783 3041 -3105 510 177 83 0 chr20 53615906 53616002 -18537880 + L1MA9 LINE L1 6159 6262 -50 * 21 0 0 0 chr20 53616005 53616026 -18537856 + AT_rich Low_complexity Low_complexity 1 21 0 262 254 32 0 chr20 53616034 53616097 -18537785 + L2 LINE L2 3169 3233 -39 182 295 0 16 chr20 53616097 53616158 -18537724 + L2 LINE L2 3208 3267 -5 346 178 346 34 chr20 53616318 53616526 -18537356 + MER113 DNA MER1_type? 11 283 -238 437 206 211 40 chr20 53616560 53616735 -18537147 + MER112 DNA MER1_type 8 212 -48 292 196 272 22 chr20 53616804 53616896 -18536986 + MER113 DNA MER1_type? 349 463 -58 2141 166 12 0 chr20 53619444 53619788 -18534094 - MER7A DNA MER2_type 0 346 1 709 226 142 98 chr20 53619915 53620446 -18533436 + MLT1H1 LTR MaLR 2 548 -4 444 261 73 84 chr20 53621036 53621428 -18532454 + L1ME LINE L1 5317 5705 -416 1963 125 47 4 chr20 53621428 53621707 -18532175 - AluSx SINE Alu -21 291 1 444 261 73 84 chr20 53621707 53621754 -18532128 + L1ME LINE L1 5705 5751 -370 21 89 0 0 chr20 53621791 53621847 -18532035 + AT_rich Low_complexity Low_complexity 1 56 0 22 0 0 0 chr20 53622177 53622199 -18531683 + AT_rich Low_complexity Low_complexity 1 22 0 489 141 13 0 chr20 53622482 53622560 -18531322 - MER1B DNA MER1_type 0 329 251 * 1201 137 6 0 chr20 53622555 53622730 -18531152 - MER1B DNA MER1_type -73 224 49 375 266 81 40 chr20 53622821 53622994 -18530888 + LTR16C LTR ERVL 255 434 -57 226 185 46 62 chr20 53623402 53623467 -18530415 - MLT1E LTR MaLR -96 497 434 279 100 0 0 chr20 53623504 53623544 -18530338 + Charlie3 DNA MER1_type 37 76 -2634 293 229 19 9 chr20 53623547 53623652 -18530230 - L1M4 LINE L1 -2923 3223 3118 1045 101 7 0 chr20 53623679 53623818 -18530064 + AluJb SINE Alu 2 141 -171 36 23 0 0 chr20 53623837 53623880 -18530002 + AT_rich Low_complexity Low_complexity 1 43 0 2239 123 3 0 chr20 53623932 53624234 -18529648 + AluSx SINE Alu 1 303 -9 1271 179 89 87 chr20 53624819 53625292 -18528590 + MER66A LTR ERV1 97 478 0 1418 230 107 18 chr20 53625720 53626102 -18527780 + MLT1G1 LTR MaLR 5 420 -175 276 111 0 0 chr20 53626297 53626342 -18527540 + (GGGGA)n Simple_repeat Simple_repeat 3 47 0 464 265 53 0 chr20 53626725 53626857 -18527025 - MER91C DNA MER1_type 0 140 2 228 200 17 17 chr20 53627080 53627140 -18526742 + LTR67 LTR ERVL 487 546 -11 444 287 62 31 chr20 53627243 53627372 -18526510 - L2 LINE L2 0 3272 3140 224 340 0 0 chr20 53627469 53627563 -18526319 - MIR SINE MIR -50 212 119 379 192 14 0 chr20 53627620 53627693 -18526189 + MER81 DNA DNA 41 114 0 237 375 10 21 chr20 53627694 53627790 -18526092 - MIR SINE MIR -156 106 12 1922 128 39 6 chr20 53628173 53628508 -18525374 - LTR46 LTR ERV1 0 460 115 548 221 0 23 chr20 53628539 53628670 -18525212 + MLT1C LTR MaLR 340 467 0 720 303 105 36 chr20 53628684 53629047 -18524835 + L2 LINE L2 2921 3308 -5 391 292 0 0 chr20 53629083 53629179 -18524703 - MIR SINE MIR -161 101 6 2761 128 117 146 chr20 53629982 53630175 -18523707 + L1MC3 LINE L1 6899 7096 -689 238 299 13 0 chr20 53630175 53630252 -18523630 + MLT1F1 LTR MaLR 37 114 -453 2761 128 117 146 chr20 53630252 53630894 -18522988 + L1MC3 LINE L1 7096 7784 -1 1039 267 59 15 chr20 53630900 53631237 -18522645 - MLT1L LTR MaLR -67 548 197 2209 92 48 0 chr20 53631466 53631759 -18522123 - AluSq SINE Alu -6 307 1 2379 101 0 0 chr20 53631984 53632281 -18521601 - AluSx SINE Alu -15 297 1 573 310 113 25 chr20 53632344 53632628 -18521254 - MLT1K LTR MaLR -3 585 277 283 284 26 17 chr20 53632973 53633089 -18520793 - MLT1K LTR MaLR -470 118 2 427 303 13 59 chr20 53633090 53633242 -18520640 - MIR SINE MIR -98 164 20 189 234 328 0 chr20 53634276 53634340 -18519542 - L2 LINE L2 0 3272 3188 283 230 44 71 chr20 53634462 53634575 -18519307 - MIR SINE MIR -62 146 37 416 219 75 48 chr20 53634755 53634901 -18518981 + MLT1F LTR MaLR 1 150 -445 540 229 75 21 chr20 53635171 53635359 -18518523 + MLT1F LTR MaLR 341 538 -4 697 243 84 71 chr20 53635726 53636119 -18517763 - MLT1L LTR MaLR -44 571 72 608 254 11 74 chr20 53636165 53636210 -18517672 + MER5B DNA MER1_type 1 47 -131 1895 163 6 16 chr20 53636210 53636523 -18517359 - AluJo SINE Alu -2 310 1 608 254 11 74 chr20 53636523 53636666 -18517216 + MER5B DNA MER1_type 47 177 -1 422 283 25 7 chr20 53636696 53636838 -18517044 - MIR3 SINE MIR -25 183 35 207 69 0 0 chr20 53637063 53637092 -18516790 + (GGGTG)n Simple_repeat Simple_repeat 4 32 0 540 0 0 0 chr20 53637355 53637415 -18516467 + (TA)n Simple_repeat Simple_repeat 2 61 0 324 290 0 97 chr20 53637419 53637498 -18516384 - L1ME2 LINE L1 -219 5945 5881 2449 80 0 3 chr20 53637498 53637798 -18516084 - AluY SINE Alu -12 299 1 324 290 0 97 chr20 53637798 53637842 -18516040 - L1ME2 LINE L1 -283 5881 5834 660 197 43 106 chr20 53637876 53638064 -18515818 + MER5B DNA MER1_type 3 178 0 316 247 105 32 chr20 53638407 53638597 -18515285 - L1ME3A LINE L1 -233 5937 5734 595 288 117 0 chr20 53638769 53638991 -18514891 + MIR SINE MIR 4 251 -11 198 254 14 56 chr20 53639224 53639295 -18514587 + MIR SINE MIR 86 153 -109 2577 197 256 17 chr20 53639295 53640222 -18513660 + MER52C LTR ERV1 1 1278 0 3533 215 65 6 chr20 53640380 53640680 -18513202 + L1ME1 LINE L1 4739 5020 -1146 1074 156 18 0 chr20 53640680 53640847 -18513035 + FAM SINE Alu 1 170 -5 3533 215 65 6 chr20 53640847 53641899 -18511983 + L1ME1 LINE L1 5020 6161 -5 227 344 0 31 chr20 53642034 53642130 -18511752 - MIR SINE MIR -124 138 46 212 203 108 68 chr20 53642441 53642515 -18511367 + MIR SINE MIR 108 184 -78 716 283 133 18 chr20 53642768 53643100 -18510782 + L2 LINE L2 2944 3313 0 373 288 12 54 chr20 53643164 53643316 -18510566 - MIR SINE MIR -79 129 20 244 279 153 18 chr20 53643404 53643515 -18510367 + LTR16C LTR ERVL 80 205 -286 250 284 49 10 chr20 53643515 53643617 -18510265 + MER21B LTR ERV1 1 106 -757 * 3109 237 69 7 chr20 53643615 53644369 -18509513 + MER21B LTR ERV1 19 819 -44 1022 270 11 7 chr20 53644362 53644632 -18509250 + LTR16C LTR ERVL 211 481 -10 * 1111 202 31 49 chr20 53644636 53645161 -18508721 - MLT1E LTR MaLR -2 591 1 426 281 211 5 chr20 53645224 53645446 -18508436 + L1MC4a LINE L1 5644 5790 -331 659 254 14 7 chr20 53645635 53645777 -18508105 + MIR SINE MIR 17 159 -103 2184 144 60 3 chr20 53645779 53646160 -18507722 + MER57A LTR ERV1 1 403 0 337 125 0 16 chr20 53646162 53646226 -18507656 - MER53 DNA DNA -118 71 9 216 204 0 56 chr20 53646236 53646290 -18507592 - L2 LINE L2 -556 2758 2708 540 232 37 86 chr20 53646546 53646746 -18507136 - MIR3 SINE MIR -63 199 8 191 302 48 0 chr20 53647265 53647328 -18506554 + MIR SINE MIR 127 192 -70 2164 103 21 3 chr20 53647548 53647839 -18506043 + AluSx SINE Alu 1 296 -16 388 235 10 0 chr20 53648056 53648158 -18505724 + HsTC2 DNA Tc2 481 583 -1315 458 205 200 34 chr20 53648183 53648388 -18505494 + HsTC2 DNA Tc2 1264 1678 -220 2027 129 29 23 chr20 53648399 53648886 -18504996 - AluSx SINE Alu 0 489 1 730 188 43 19 chr20 53648889 53649096 -18504786 + HsTC2 DNA Tc2 1684 1895 -3 297 269 51 56 chr20 53649135 53649177 -18504705 + MER112 DNA MER1_type 14 55 -205 1754 159 3 59 chr20 53649177 53649497 -18504385 + AluJo SINE Alu 1 302 -10 297 269 51 56 chr20 53649497 53649651 -18504231 + MER112 DNA MER1_type 55 209 -51 857 217 43 0 chr20 53649910 53650094 -18503788 - MER58A DNA MER1_type -32 192 1 236 318 58 29 chr20 53650149 53650322 -18503560 - MIR SINE MIR 0 262 85 * 409 268 24 24 chr20 53650301 53650428 -18503454 + MIR SINE MIR 67 193 -69 277 217 0 43 chr20 53651737 53651806 -18502076 + MLT1K LTR MaLR 220 285 -303 226 274 128 68 chr20 53652003 53652120 -18501762 + MIR3 SINE MIR 78 201 -7 423 250 144 0 chr20 53652123 53652227 -18501655 - L2 LINE L2 0 3313 3195 3129 246 84 39 chr20 53652233 53653346 -18500536 - L2 LINE L2 -733 2581 1419 718 231 44 12 chr20 53653354 53653514 -18500368 + MIR SINE MIR 8 172 -90 512 268 32 0 chr20 53653551 53653674 -18500208 + L2 LINE L2 3177 3303 -10 793 279 21 13 chr20 53653685 53653918 -18499964 - L2 LINE L2 -1891 1423 1189 924 274 98 17 chr20 53654008 53654427 -18499455 + MLT1K LTR MaLR 136 588 0 259 337 0 0 chr20 53654430 53654522 -18499360 + MIR SINE MIR 157 248 -14 767 257 38 82 chr20 53654565 53654908 -18498974 - L2 LINE L2 -15 3257 2930 189 0 0 0 chr20 53655059 53655080 -18498802 + (TG)n Simple_repeat Simple_repeat 2 22 0 540 241 62 7 chr20 53655081 53655226 -18498656 + Charlie8 DNA MER1_type 92 244 -2173 730 250 38 38 chr20 53655503 53655730 -18498152 - MIR SINE MIR -14 248 20 303 211 0 0 chr20 53656100 53656157 -18497725 - MIR SINE MIR -112 150 94 379 262 24 32 chr20 53656290 53656411 -18497471 + MIR SINE MIR 32 152 -106 2188 110 7 3 chr20 53656411 53656701 -18497181 + AluSx SINE Alu 1 291 -21 582 281 55 24 chr20 53656712 53656965 -18496917 - MIR SINE MIR 0 262 2 286 272 9 61 chr20 53657287 53657401 -18496481 - MIR SINE MIR -84 124 17 727 247 27 16 chr20 53657871 53658057 -18495825 + MIR SINE MIR 33 220 -42 844 165 0 0 chr20 53658622 53658749 -18495133 - AluJb SINE Alu -185 127 1 701 165 8 0 chr20 53658929 53659050 -18494832 - MLT2D LTR ERVL -282 132 11 757 209 108 5 chr20 53659076 53659339 -18494543 - MER33 DNA MER1_type -80 244 1 682 258 19 105 chr20 53659400 53659695 -18494187 - MER102a DNA MER1_type -1087 330 70 1652 166 7 32 chr20 53659695 53660003 -18493879 + AluJb SINE Alu 1 300 -12 682 258 19 105 chr20 53660003 53660068 -18493814 - MER102a DNA MER1_type -1347 70 1 282 246 27 36 chr20 53660092 53660202 -18493680 + LTR33 LTR ERVL 12 120 -401 1494 216 30 30 chr20 53660222 53660586 -18493296 + MLT2D LTR ERVL 11 377 -37 468 0 0 0 chr20 53660586 53660638 -18493244 + (CA)n Simple_repeat Simple_repeat 2 53 0 1494 216 30 30 chr20 53660638 53660671 -18493211 + MLT2D LTR ERVL 376 408 -6 365 306 8 60 chr20 53660966 53661007 -18492875 - MIR SINE MIR -61 147 105 1745 191 3 7 chr20 53661007 53661301 -18492581 + AluJo SINE Alu 1 293 -19 365 306 8 60 chr20 53661301 53661393 -18492489 - MIR SINE MIR -103 105 21 311 296 61 33 chr20 53661734 53661947 -18491935 - L1MC/D LINE L1 -2514 5528 5310 615 260 81 27 chr20 53661996 53662254 -18491628 + MLT1H LTR MaLR 75 346 -203 440 237 111 7 chr20 53662263 53662398 -18491484 + MLT1H LTR MaLR 447 595 0 479 217 217 106 chr20 53662768 53663109 -18490773 + L2 LINE L2 2935 3313 0 1148 251 109 28 chr20 53663191 53663586 -18490296 - L2 LINE L2 -4 3309 2883 374 338 7 14 chr20 53665489 53665634 -18488248 - MIR SINE MIR -118 144 1 524 244 51 34 chr20 53665658 53665834 -18488048 - MIR SINE MIR -12 250 72 249 265 0 0 chr20 53665865 53665948 -18487934 + (CA)n Simple_repeat Simple_repeat 1 83 0 294 186 86 0 chr20 53666147 53666217 -18487665 - MER113 DNA MER1_type? -86 435 360 584 152 0 10 chr20 53666226 53666325 -18487557 + MER4A LTR ERV1 1 98 -566 1944 109 3 22 chr20 53666325 53666675 -18487207 + MER4A LTR ERV1 263 664 0 419 250 105 53 chr20 53666675 53666903 -18486979 - MER113 DNA MER1_type? -167 354 115 797 272 115 40 chr20 53667347 53667970 -18485912 + L2 LINE L2 2628 3312 -1 258 178 14 27 chr20 53667982 53668055 -18485827 + CT-rich Low_complexity Low_complexity 1 72 0 414 279 6 6 chr20 53668861 53669022 -18484860 + GA-rich Low_complexity Low_complexity 2 162 0 815 202 58 17 chr20 53669172 53669345 -18484537 - MER5A DNA MER1_type -6 183 4 440 237 94 45 chr20 53669890 53670135 -18483747 + L1MC/D LINE L1 5545 5801 -2007 532 357 114 11 chr20 53670314 53670675 -18483207 - L1M4 LINE L1 -2241 3905 3508 1020 175 0 0 chr20 53670714 53670874 -18483008 - AluJo SINE Alu -152 160 1 614 266 43 16 chr20 53670916 53671100 -18482782 + MER20 DNA MER1_type 16 204 -15 310 175 79 0 chr20 53671734 53671797 -18482085 - MIR SINE MIR -58 150 83 48 43 0 0 chr20 53672029 53672098 -18481784 + AT_rich Low_complexity Low_complexity 1 69 0 1720 123 63 0 chr20 53672190 53672442 -18481440 + AluSx SINE Alu 19 286 -26 205 211 0 0 chr20 53672444 53672482 -18481400 + (TA)n Simple_repeat Simple_repeat 1 38 0 392 316 123 0 chr20 53672548 53672703 -18481179 - MIR SINE MIR -2 260 87 2254 105 3 25 chr20 53673363 53673678 -18480204 + AluSx SINE Alu 1 308 -4 1899 157 3 26 chr20 53674231 53674537 -18479345 - AluJo SINE Alu -9 303 5 841 228 37 64 chr20 53674640 53674884 -18478998 + MIR SINE MIR 5 240 -22 354 224 40 0 chr20 53675346 53675422 -18478460 + MIR SINE MIR 53 131 -131 614 253 70 19 chr20 53675510 53675603 -18478279 - MIR SINE MIR -6 256 150 2102 166 96 13 chr20 53675603 53675989 -18477893 - MER47B DNA MER2_type 0 418 1 614 253 70 19 chr20 53675989 53676053 -18477829 - MIR SINE MIR -112 150 91 2737 83 19 13 chr20 53676147 53676520 -18477362 - THE1C LTR MaLR 0 375 1 666 282 145 34 chr20 53676800 53677324 -18476558 - L2 LINE L2 -11 3302 2726 206 303 64 46 chr20 53677828 53677937 -18475945 + L2 LINE L2 2409 2519 -795 * 940 254 0 0 chr20 53677929 53678126 -18475756 - MIR SINE MIR -32 230 34 232 280 0 0 chr20 53678139 53678189 -18475693 + L2 LINE L2 3004 3053 -219 496 219 55 31 chr20 53678217 53678345 -18475537 + MIR SINE MIR 37 167 -95 26 50 0 0 chr20 53678388 53678428 -18475454 + AT_rich Low_complexity Low_complexity 1 40 0 885 256 91 4 chr20 53678452 53678818 -18475064 + LTR16A LTR ERVL 18 447 -3 493 289 41 46 chr20 53678880 53679077 -18474805 - MIR SINE MIR -58 204 9 675 278 24 38 chr20 53679250 53679459 -18474423 + MIR SINE MIR 26 231 -31 558 278 40 23 chr20 53679484 53679657 -18474225 + MIR SINE MIR 22 197 -65 420 217 11 0 chr20 53679709 53679801 -18474081 - MER96 DNA MER1_type? -82 93 1 975 201 52 0 chr20 53679879 53680073 -18473809 + MIR SINE MIR 5 208 -54 525 159 0 56 chr20 53680076 53680183 -18473699 - FRAM SINE Alu 0 176 76 1079 165 0 39 chr20 53680206 53680412 -18473470 + AluJb SINE Alu 106 303 -9 412 176 0 0 chr20 53680412 53680480 -18473402 - AluJo/FLAM SINE Alu -196 116 49 230 284 49 12 chr20 53681174 53681255 -18472627 - MIR SINE MIR -55 207 124 307 237 21 72 chr20 53681275 53681372 -18472510 + L1ME4a LINE L1 5956 6047 -74 917 233 57 0 chr20 53681412 53681622 -18472260 - MER58A DNA MER1_type -2 222 1 221 262 203 0 chr20 53681622 53681730 -18472152 + MIR SINE MIR 16 132 -76 321 257 14 0 chr20 53681819 53681889 -18471993 + L2 LINE L2 3240 3310 -3 181 347 0 0 chr20 53681884 53681933 -18471949 + MIR SINE MIR 194 242 -20 * 183 254 136 0 chr20 53682730 53682789 -18471093 - MIR SINE MIR -86 122 56 206 255 0 0 chr20 53682840 53682887 -18470995 + L2 LINE L2 3210 3256 -16 532 307 98 14 chr20 53683007 53683222 -18470660 + MIR SINE MIR 5 237 -25 543 47 0 25 chr20 53683230 53683480 -18470402 - AluY SINE Alu 0 320 1 1146 298 42 11 chr20 53683491 53683644 -18470238 - L2 LINE L2 -4 3309 3162 2107 122 0 0 chr20 53683644 53683940 -18469942 + AluSx SINE Alu 1 296 -16 1146 298 42 11 chr20 53683940 53684139 -18469743 - L2 LINE L2 -151 3162 2946 294 95 0 0 chr20 53684144 53684186 -18469696 + (CAT)n Simple_repeat Simple_repeat 3 44 0 215 88 88 0 chr20 53684204 53684238 -18469644 + L2 LINE L2 3271 3307 -6 186 191 0 0 chr20 53684344 53684386 -18469496 + CT-rich Low_complexity Low_complexity 1 42 0 1663 153 42 0 chr20 53684388 53684675 -18469207 - AluJo SINE Alu -13 299 1 201 279 0 0 chr20 53684686 53684729 -18469153 + MIR SINE MIR 75 117 -91 993 237 77 59 chr20 53684908 53685222 -18468660 + Charlie8 DNA MER1_type 4 313 -168 1933 120 35 0 chr20 53685222 53685506 -18468376 - AluSx SINE Alu -18 294 1 993 237 77 59 chr20 53685506 53685617 -18468265 + Charlie8 DNA MER1_type 313 421 -60 208 111 69 0 chr20 53685691 53685763 -18468119 + (TA)n Simple_repeat Simple_repeat 1 77 0 393 264 124 8 chr20 53685823 53685952 -18467930 - MIR3 SINE MIR -5 203 60 3167 147 2 10 chr20 53685973 53686463 -18467419 + MER66B LTR ERV1 1 486 0 1456 184 6 66 chr20 53687256 53687384 -18466498 + AluJo SINE Alu 1 135 -177 1720 126 17 34 chr20 53687384 53687678 -18466204 - AluJb SINE Alu -23 289 1 1456 184 6 66 chr20 53687678 53687881 -18466001 + AluJo SINE Alu 135 312 0 628 162 74 14 chr20 53688324 53688472 -18465410 - MER58 DNA MER1_type -1 2419 2263 * 956 210 22 0 chr20 53688461 53688642 -18465240 - MER58 DNA MER1_type -2235 185 1 237 324 135 14 chr20 53689199 53689347 -18464535 - L3 LINE CR1 -3 1574 1409 196 337 102 0 chr20 53689445 53689543 -18464339 - MIR SINE MIR -83 179 72 761 281 132 10 chr20 53689757 53690188 -18463694 + L1ME LINE L1 5343 5819 -302 550 260 116 105 chr20 53690279 53690668 -18463214 + L1ME4a LINE L1 5729 6121 0 504 239 34 0 chr20 53690762 53690879 -18463003 - L1ME1 LINE L1 -4 6162 6042 216 337 31 10 chr20 53691071 53691169 -18462713 - MIR SINE MIR -65 197 98 1301 151 188 4 chr20 53691175 53691447 -18462435 + MER33 DNA MER1_type 2 323 -1 733 300 198 9 chr20 53691462 53692039 -18461843 + L2 LINE L2 1909 2594 -720 1416 186 100 10 chr20 53692047 53692337 -18461545 - MER58B DNA MER1_type 0 341 26 704 200 58 0 chr20 53692427 53692582 -18461300 - MIR SINE MIR -4 258 95 329 328 68 21 chr20 53692577 53692769 -18461113 + L2 LINE L2 2733 2933 -381 * 338 254 14 0 chr20 53692955 53693026 -18460856 + L2 LINE L2 3200 3271 -1 401 205 24 12 chr20 53693028 53693111 -18460771 - MIR SINE MIR -162 100 17 354 230 35 0 chr20 53693122 53693209 -18460673 + MER94 DNA DNA 10 99 -35 261 319 0 9 chr20 53693717 53693833 -18460049 + GA-rich Low_complexity Low_complexity 2 116 0 350 285 87 0 chr20 53693923 53694078 -18459804 - MIR3 SINE MIR -23 185 10 460 294 36 10 chr20 53694554 53694748 -18459134 + L2 LINE L2 2552 2750 -564 290 362 0 0 chr20 53694756 53694894 -18458988 + L1MC4a LINE L1 4778 4915 -1231 1447 177 10 14 chr20 53694897 53695185 -18458697 + L1ME4a LINE L1 4789 5075 -1071 538 234 35 14 chr20 53695194 53695339 -18458543 + L1ME4a LINE L1 5014 5161 -985 766 270 90 53 chr20 53695348 53696071 -18457811 + L1MC4a LINE L1 4904 5663 -795 29 0 0 0 chr20 53696103 53696132 -18457750 + AT_rich Low_complexity Low_complexity 1 29 0 1428 137 37 41 chr20 53696144 53696415 -18457467 + AluSx SINE Alu 11 280 -32 333 68 0 0 chr20 53696415 53696459 -18457423 + (TAAA)n Simple_repeat Simple_repeat 1 44 0 235 332 126 5 chr20 53696482 53696681 -18457201 + L1MC4a LINE L1 5941 6163 -1645 797 301 33 0 chr20 53696717 53696989 -18456893 + MER113 DNA MER1_type? 206 486 -35 1541 178 3 23 chr20 53697180 53697471 -18456411 + AluJo SINE Alu 7 293 -19 456 51 0 0 chr20 53697471 53697530 -18456352 + (CATA)n Simple_repeat Simple_repeat 2 60 0 1541 178 3 23 chr20 53697530 53697541 -18456341 + AluJo SINE Alu 293 303 -9 633 236 182 21 chr20 53698024 53698266 -18455616 - MER102b DNA MER1_type -27 314 34 655 266 60 15 chr20 53698410 53698609 -18455273 + L1ME4a LINE L1 5483 5690 -431 297 230 168 0 chr20 53698732 53698845 -18455037 + L1ME4a LINE L1 5988 6119 -2 24 32 0 0 chr20 53698845 53698876 -18455006 + AT_rich Low_complexity Low_complexity 1 31 0 369 275 81 16 chr20 53698898 53699146 -18454736 + L1ME4a LINE L1 5709 6006 -115 221 226 52 9 chr20 53699451 53699566 -18454316 + (TA)n Simple_repeat Simple_repeat 1 120 0 233 57 29 0 chr20 53700553 53700588 -18453294 + (TTTTC)n Simple_repeat Simple_repeat 2 37 0 347 43 0 0 chr20 53700588 53700635 -18453247 - MER50 LTR ERV1 -130 604 558 230 313 54 9 chr20 53700655 53700767 -18453115 - L3 LINE CR1 -90 1487 1371 1189 250 86 42 chr20 53700804 53701351 -18452531 + L2 LINE L2 2722 3311 -2 489 289 69 16 chr20 53701674 53701920 -18451962 + L1ME4a LINE L1 5559 5817 -304 1858 150 0 7 chr20 53702019 53702312 -18451570 + AluJo SINE Alu 1 291 -21 340 312 58 37 chr20 53702617 53702674 -18451208 + L1ME4a LINE L1 5874 5928 -193 2214 108 0 0 chr20 53702674 53702980 -18450902 - AluSq SINE Alu 0 313 8 340 312 58 37 chr20 53702980 53703111 -18450771 + L1ME4a LINE L1 5928 6066 -55 825 130 0 0 chr20 53703167 53703298 -18450584 + L1MA9 LINE L1 6182 6312 0 381 221 11 21 chr20 53703636 53703731 -18450151 - MIR3 SINE MIR -23 185 92 1239 243 101 52 chr20 53703923 53704515 -18449367 + L2 LINE L2 2701 3312 -1 367 273 0 11 chr20 53704673 53704761 -18449121 - MIR SINE MIR -174 88 2 308 203 25 0 chr20 53705424 53705503 -18448379 + GA-rich Low_complexity Low_complexity 3 83 0 787 98 5 72 chr20 53705510 53705703 -18448179 + (GGAAA)n Simple_repeat Simple_repeat 1 180 0 890 308 109 29 chr20 53705924 53706638 -18447244 - L2 LINE L2 0 3313 2531 901 251 111 64 chr20 53706720 53707292 -18446590 - L2 LINE L2 -10 3303 2697 1492 196 6 13 chr20 53707302 53707613 -18446269 + AluJo SINE Alu 1 309 -3 472 189 104 98 chr20 53707758 53707825 -18446057 + MIR SINE MIR 33 98 -164 1084 203 9 22 chr20 53707825 53708047 -18445835 + MER20 DNA MER1_type 1 219 0 472 189 104 98 chr20 53708047 53708143 -18445739 + MIR SINE MIR 98 197 -65 2240 81 3 17 chr20 53708148 53708446 -18445436 + AluSp SINE Alu 2 295 -18 1277 193 74 40 chr20 53708464 53708633 -18445249 - MER58B DNA MER1_type -2079 341 179 1783 139 0 43 chr20 53708633 53708936 -18444946 - AluJo SINE Alu -20 292 3 1277 193 74 40 chr20 53708936 53709092 -18444790 - MER58B DNA MER1_type -2241 179 5 898 154 7 0 chr20 53709119 53709268 -18444614 + AluJb SINE Alu 160 309 -3 264 136 136 12 chr20 53709423 53709504 -18444378 + MER90 LTR ERV1 251 341 -273 455 273 25 50 chr20 53709518 53709679 -18444203 + MER90 LTR ERV1 458 614 0 184 211 0 0 chr20 53710207 53710245 -18443637 + MER5B DNA MER1_type 140 177 -1 263 193 0 35 chr20 53710258 53710315 -18443567 + MER102b DNA MER1_type 237 291 -50 407 298 6 62 chr20 53710781 53710959 -18442923 - MIR3 SINE MIR -14 194 27 350 283 38 9 chr20 53711149 53711255 -18442627 - MIR SINE MIR -49 213 105 456 192 36 102 chr20 53711275 53711442 -18442440 - L2 LINE L2 0 3313 3158 830 191 12 0 chr20 53711808 53711970 -18441912 + FRAM SINE Alu 1 164 -12 422 242 68 11 chr20 53711971 53712098 -18441784 + MIR SINE MIR 62 192 -67 626 302 139 0 chr20 53712293 53712508 -18441374 + MIR SINE MIR 6 250 -12 346 243 5 0 chr20 53712863 53712944 -18440938 + MIR SINE MIR 69 153 -55 246 330 152 43 chr20 53712993 53713223 -18440659 + MIR SINE MIR 8 262 0 1536 215 46 0 chr20 53713383 53713709 -18440173 + MER58B DNA MER1_type 1 341 0 251 339 99 8 chr20 53713760 53713881 -18440001 + MIR SINE MIR 61 192 -70 559 269 269 26 chr20 53714092 53714360 -18439522 - MLT1J LTR MaLR -175 336 4 498 350 68 9 chr20 53715065 53715394 -18438488 - L1MC/D LINE L1 -506 5658 5370 428 289 0 0 chr20 53715401 53715505 -18438377 + MIR SINE MIR 147 250 -12 214 162 81 0 chr20 53715565 53715602 -18438280 + MIR SINE MIR 212 251 -11 184 204 45 23 chr20 53715941 53715985 -18437897 - MIR3 SINE MIR -52 156 112 200 264 46 58 chr20 53715986 53716073 -18437809 - MIR3 SINE MIR -41 167 82 286 266 0 0 chr20 53716580 53716644 -18437238 + L2 LINE L2 2996 3059 -213 490 255 123 37 chr20 53716808 53717051 -18436831 + L2 LINE L2 2442 2705 -609 214 283 0 0 chr20 53717085 53717131 -18436751 + L2 LINE L2 2701 2746 -568 590 204 90 12 chr20 53717146 53717313 -18436569 + Charlie4a DNA MER1_type 19 198 -310 280 100 0 50 chr20 53717313 53717373 -18436509 + (TTTC)n Simple_repeat Simple_repeat 2 58 0 1834 129 10 29 chr20 53717375 53717685 -18436197 - AluSx SINE Alu -7 305 2 800 266 57 44 chr20 53717686 53718002 -18435880 + Charlie4a DNA MER1_type 182 501 -7 369 259 224 0 chr20 53718232 53718379 -18435503 - MIR SINE MIR -47 215 36 246 297 109 0 chr20 53718392 53718493 -18435389 + MER5B DNA MER1_type 67 178 0 190 293 0 0 chr20 53718503 53718544 -18435338 + L2 LINE L2 3213 3253 -19 360 0 0 0 chr20 53718551 53718591 -18435291 + (TAAA)n Simple_repeat Simple_repeat 2 41 0 366 295 36 0 chr20 53719161 53719273 -18434609 + MIR SINE MIR 86 201 -61 579 253 108 16 chr20 53719283 53719477 -18434405 - LTR16C LTR ERVL -34 457 246 * 1106 285 43 3 chr20 53719476 53719799 -18434083 - LTR16C LTR ERVL -155 336 1 452 217 133 7 chr20 53719897 53720040 -18433842 - MIR SINE MIR -73 189 29 587 215 11 96 chr20 53720114 53720291 -18433591 + L1ME1 LINE L1 5957 6118 -48 853 291 34 8 chr20 53720671 53720936 -18432946 - L2 LINE L2 -649 2665 2394 207 160 144 128 chr20 53721682 53721807 -18432075 - MIR3 SINE MIR -43 165 39 639 226 181 0 chr20 53722239 53722416 -18431466 + L2 LINE L2 3104 3312 -1 184 268 110 49 chr20 53722468 53722550 -18431332 - L2 LINE L2 0 3272 3186 692 176 0 0 chr20 53722610 53722729 -18431153 + FLAM_A SINE Alu 18 136 -6 251 88 0 0 chr20 53722798 53722832 -18431050 + MER63 DNA MER1_type 6 39 -171 348 24 0 0 chr20 53722839 53722880 -18431002 + (TG)n Simple_repeat Simple_repeat 2 42 0 459 245 0 0 chr20 53722882 53722976 -18430906 + MER63 DNA MER1_type 968 1061 0 1923 191 25 0 chr20 53723681 53724037 -18429845 + MLT1A1 LTR MaLR 1 365 0 335 228 78 16 chr20 53724177 53724385 -18429497 + LTR16C LTR ERVL 242 491 0 459 303 203 19 chr20 53724631 53725016 -18428866 + L2 LINE L2 2553 3007 -265 450 302 7 22 chr20 53725106 53725245 -18428637 + MIR SINE MIR 2 138 -124 587 194 71 39 chr20 53725384 53725539 -18428343 - MIR SINE MIR 0 262 103 8940 105 18 6 chr20 53725540 53726826 -18427056 + HSMAR2 DNA Mariner 1 1301 -1 266 342 65 19 chr20 53727022 53727177 -18426705 - MER103 DNA DNA -1 165 4 354 267 20 89 chr20 53727288 53727434 -18426448 + L2 LINE L2 3137 3272 0 222 366 45 64 chr20 53727448 53727650 -18426232 - L2 LINE L2 -31 3241 3044 506 16 16 0 chr20 53727857 53727920 -18425962 + (TG)n Simple_repeat Simple_repeat 2 65 0 990 288 23 20 chr20 53728023 53728419 -18425463 + L1M4 LINE L1 3299 3695 -2451 261 268 146 0 chr20 53728554 53728636 -18425246 - MIR SINE MIR -1 261 168 702 219 0 0 chr20 53728656 53728779 -18425103 - FLAM_A SINE Alu -9 124 2 700 212 111 16 chr20 53729012 53729201 -18424681 - MIR SINE MIR -46 216 10 755 245 6 45 chr20 53729539 53729760 -18424122 - MIR SINE MIR 0 262 55 537 185 0 9 chr20 53729868 53729976 -18423906 - MER53 DNA DNA -60 129 23 1638 174 33 124 chr20 53730745 53731248 -18422634 - L1ME2 LINE L1 -7 6155 5669 703 174 23 4 chr20 53731348 53731620 -18422262 + CT-rich Low_complexity Low_complexity 1 277 0 536 249 111 73 chr20 53732070 53732412 -18421470 + L2 LINE L2 2903 3257 -56 813 220 87 66 chr20 53732648 53732934 -18420948 - MER102b DNA MER1_type -48 293 2 252 244 227 34 chr20 53733093 53733212 -18420670 - MIR3 SINE MIR -49 159 18 1029 185 10 15 chr20 53733911 53734111 -18419771 - MER3 DNA MER1_type -5 204 6 193 336 98 42 chr20 53734121 53734264 -18419618 + MIR SINE MIR 21 171 -91 637 271 118 31 chr20 53734504 53734895 -18418987 - HAL1b LINE L1 -921 427 3 350 269 134 42 chr20 53736016 53736254 -18417628 + MIR SINE MIR 3 262 0 340 296 15 67 chr20 53736332 53736372 -18417510 - MIR3 SINE MIR -14 194 153 946 155 111 53 chr20 53736372 53736579 -18417303 + MER20 DNA MER1_type 1 219 0 340 296 15 67 chr20 53736579 53736673 -18417209 - MIR3 SINE MIR -55 153 67 316 227 40 0 chr20 53736784 53736859 -18417023 + MER96 DNA MER1_type? 98 175 0 537 246 95 86 chr20 53737813 53738045 -18415837 + MIR SINE MIR 8 241 -21 327 191 0 0 chr20 53738046 53738114 -18415768 + CT-rich Low_complexity Low_complexity 1 68 0 423 0 0 0 chr20 53738115 53738162 -18415720 + (TAGA)n Simple_repeat Simple_repeat 4 50 0 736 30 20 0 chr20 53738162 53738261 -18415621 + (TCTA)n Simple_repeat Simple_repeat 2 102 0 259 360 29 22 chr20 53738575 53738711 -18415171 + MIR SINE MIR 3 139 -69 246 327 128 26 chr20 53738872 53739028 -18414854 - MIR SINE MIR -4 258 87 277 316 181 33 chr20 53739063 53739278 -18414604 - MIR SINE MIR -6 256 10 271 218 18 0 chr20 53739324 53739379 -18414503 - MIR SINE MIR -6 256 201 184 222 123 62 chr20 53739533 53739614 -18414268 - MIR SINE MIR -118 144 59 212 270 16 0 chr20 53740032 53740095 -18413787 + MIR SINE MIR 74 137 -71 699 194 35 86 chr20 53740644 53740876 -18413006 + L2 LINE L2 2932 3151 -162 3882 135 27 21 chr20 53740876 53741500 -18412382 + MER41B LTR ERV1 1 628 -7 420 265 7 41 chr20 53741519 53741666 -18412216 + L2 LINE L2 3172 3313 0 209 305 84 29 chr20 53741794 53742013 -18411869 - MIR SINE MIR -16 246 16 2225 92 20 0 chr20 53742046 53742349 -18411533 - AluSg SINE Alu -1 309 1 329 234 146 51 chr20 53742636 53742773 -18411109 - MIR SINE MIR -59 203 54 1016 245 34 8 chr20 53742862 53743099 -18410783 - MIR SINE MIR -1 261 19 286 318 70 8 chr20 53743880 53744009 -18409873 + MIR SINE MIR 65 201 -61 1039 171 36 0 chr20 53744015 53744208 -18409674 - MER20 DNA MER1_type 0 219 20 583 174 41 1 chr20 53744303 53744412 -18409470 - MIR SINE MIR -41 167 56 2150 82 9 61 chr20 53744412 53744741 -18409141 + AluSx SINE Alu 1 312 0 1411 190 16 0 chr20 53744745 53744987 -18408895 + MLT1F1 LTR MaLR 314 559 -8 2030 157 119 9 chr20 53744997 53745213 -18408669 + MLT1C LTR MaLR 1 192 -275 2793 7 0 0 chr20 53745213 53745522 -18408360 + AluYa5 SINE Alu 1 309 -2 2030 157 119 9 chr20 53745522 53745726 -18408156 + MLT1C LTR MaLR 192 467 0 278 232 101 60 chr20 53745738 53745906 -18407976 - L1MDa LINE L1 -4780 1760 1586 186 270 0 0 chr20 53746076 53746150 -18407732 + (CATATA)n Simple_repeat Simple_repeat 3 76 0 426 235 0 12 chr20 53750016 53750101 -18403781 - MER96 DNA MER1_type? -91 84 1 256 181 328 35 chr20 53751737 53751853 -18402029 - Charlie7 DNA MER1_type -2462 150 1 578 294 127 0 chr20 53751946 53752143 -18401739 + MER58A DNA MER1_type 2 223 -1 303 326 0 0 chr20 53752428 53752517 -18401365 - L2 LINE L2 -969 2345 2257 954 228 109 45 chr20 53752550 53752664 -18401218 + L1MC4a LINE L1 5815 5920 -1888 1438 176 45 21 chr20 53752664 53752954 -18400928 + AluJo SINE Alu 1 297 -15 954 228 109 45 chr20 53752954 53753150 -18400732 + L1MC4a LINE L1 5920 6145 -1663 1708 135 28 35 chr20 53753150 53753439 -18400443 + AluJo SINE Alu 1 287 -25 327 167 53 30 chr20 53753470 53753602 -18400280 + GA-rich Low_complexity Low_complexity 3 137 0 805 269 117 7 chr20 53753614 53753922 -18399960 + L1MC4a LINE L1 7453 7794 -14 1697 275 75 22 chr20 53754909 53755599 -18398283 + MER20B DNA MER1_type 1 727 -56 420 303 7 35 chr20 53756237 53756382 -18397500 + L2 LINE L2 3168 3308 -5 233 359 108 44 chr20 53756374 53756764 -18397118 - L2 LINE L2 -447 2867 2453 * 1703 60 0 5 chr20 53756764 53756982 -18396900 + AluY SINE Alu 1 217 -94 838 104 0 0 chr20 53756982 53757097 -18396785 + AluY SINE Alu 186 300 -11 186 321 0 0 chr20 53757217 53757270 -18396612 + L2 LINE L2 2286 2338 -976 891 126 0 22 chr20 53757431 53757566 -18396316 + FLAM_C SINE Alu 2 133 0 362 341 18 29 chr20 53757634 53757804 -18396078 - L2 LINE L2 -1320 1994 1827 196 333 0 0 chr20 53758212 53758263 -18395619 + L2 LINE L2 3254 3304 -9 2160 107 0 0 chr20 53758274 53758574 -18395308 + AluSq SINE Alu 1 300 -13 292 301 82 53 chr20 53758943 53759090 -18394792 + MIR SINE MIR 51 207 -55 1270 154 91 17 chr20 53759090 53759388 -18394494 + MER33 DNA MER1_type 1 320 -4 292 301 82 53 chr20 53759388 53759446 -18394436 + MIR SINE MIR 207 262 0 797 295 107 35 chr20 53759513 53760078 -18393804 - L2 LINE L2 0 3313 2684 2211 66 13 20 chr20 53760078 53760381 -18393501 + AluSx SINE Alu 1 301 -11 797 295 107 35 chr20 53760381 53760520 -18393362 - L2 LINE L2 -629 2684 2556 500 327 69 5 chr20 53761728 53761930 -18391952 - MIR SINE MIR -35 227 13 255 247 45 67 chr20 53761940 53762029 -18391853 - MIR SINE MIR -78 184 98 354 288 27 34 chr20 53762048 53762194 -18391688 - MIR SINE MIR -40 222 78 450 220 33 11 chr20 53762413 53762504 -18391378 - MER96 DNA MER1_type? -82 93 1 364 302 8 16 chr20 53762586 53762712 -18391170 - LTR67 LTR ERVL -5 552 428 265 316 37 59 chr20 53762751 53762887 -18390995 - LTR67 LTR ERVL -310 247 115 731 211 54 22 chr20 53763117 53763302 -18390580 + MIR SINE MIR 68 258 -4 191 231 0 0 chr20 53763316 53763355 -18390527 + L2 LINE L2 3275 3313 0 2043 134 0 0 chr20 53763389 53763687 -18390195 - AluSx SINE Alu -13 299 2 1110 264 81 23 chr20 53763721 53764210 -18389672 + L2 LINE L2 2772 3291 -22 2035 121 0 26 chr20 53764394 53764701 -18389181 - AluSx SINE Alu -13 299 1 398 297 67 12 chr20 53764761 53764926 -18388956 - MIR SINE MIR 0 262 89 640 321 45 9 chr20 53765023 53765247 -18388635 - MIR SINE MIR -11 251 20 396 0 0 0 chr20 53765668 53765712 -18388170 + (TG)n Simple_repeat Simple_repeat 2 45 0 2058 116 0 3 chr20 53765792 53766094 -18387788 - AluJb SINE Alu -11 301 1 518 279 69 44 chr20 53766210 53766414 -18387468 - MIR SINE MIR -46 216 8 553 287 40 108 chr20 53767549 53767901 -18385981 - L2 LINE L2 0 3272 2945 575 0 29 0 chr20 53767948 53768018 -18385864 + (GAGAA)n Simple_repeat Simple_repeat 5 76 0 499 268 10 77 chr20 53768048 53768242 -18385640 - L2 LINE L2 -508 2806 2626 2089 160 6 9 chr20 53768650 53768994 -18384888 - MLT1A1 LTR MaLR 0 365 22 186 209 23 0 chr20 53769036 53769079 -18384803 - L2 LINE L2 -685 2629 2586 1016 197 79 0 chr20 53769257 53769485 -18384397 - LTR50 LTR ERVL 0 795 550 964 206 153 3 chr20 53769502 53769789 -18384093 - LTR50 LTR ERVL -465 330 1 250 59 0 0 chr20 53770148 53770182 -18383700 - MIR SINE MIR -65 143 110 237 279 47 12 chr20 53770275 53770361 -18383521 + MIR SINE MIR 118 206 -56 203 189 0 0 chr20 53770560 53770597 -18383285 + (TAA)n Simple_repeat Simple_repeat 2 38 0 183 300 100 12 chr20 53770708 53770788 -18383094 - MIR SINE MIR -62 200 114 * 357 252 176 8 chr20 53770787 53770918 -18382964 + MIR SINE MIR 107 259 -3 312 27 0 0 chr20 53771298 53771335 -18382547 + (TG)n Simple_repeat Simple_repeat 2 38 0 633 296 65 62 chr20 53771769 53772528 -18381354 + HAL1 LINE L1 823 1587 -920 2377 137 68 22 chr20 53772528 53772750 -18381132 + MER57B LTR ERV1 1 211 -223 2442 46 0 3 chr20 53772750 53773055 -18380827 - AluY SINE Alu -7 304 1 2377 137 68 22 chr20 53773055 53773247 -18380635 + MER57B LTR ERV1 211 434 0 633 296 65 62 chr20 53773247 53773329 -18380553 + HAL1 LINE L1 1587 1667 -840 505 296 56 0 chr20 53773355 53773509 -18380373 - MER20 DNA MER1_type -5 214 53 314 312 77 41 chr20 53774000 53774465 -18379417 + L1M4 LINE L1 2131 2612 -3534 485 47 28 47 chr20 53774505 53774611 -18379271 + (TTTA)n Simple_repeat Simple_repeat 3 106 0 1667 177 0 0 chr20 53774615 53774886 -18378996 - AluJb SINE Alu -41 271 1 902 294 90 39 chr20 53775126 53775738 -18378144 - L1MC4a LINE L1 -1849 5959 5317 309 258 40 53 chr20 53775851 53775963 -18377919 - L1MC4a LINE L1 -1095 5051 4940 1519 149 21 37 chr20 53775963 53776239 -18377643 + MER33 DNA MER1_type 1 273 -2312 1633 171 7 17 chr20 53776239 53776537 -18377345 + AluJb SINE Alu 1 295 -17 1519 149 21 37 chr20 53776537 53776588 -18377294 + MER33 DNA MER1_type 273 323 -1 309 258 40 53 chr20 53776588 53776626 -18377256 - L1MC4a LINE L1 -1206 4940 4903 715 272 164 57 chr20 53776764 53777103 -18376779 + LTR67 LTR ERVL 73 471 -86 1789 135 57 4 chr20 53777103 53777384 -18376498 + AluSx SINE Alu 1 296 -16 715 272 164 57 chr20 53777384 53777482 -18376400 + LTR67 LTR ERVL 471 557 0 243 257 29 73 chr20 53777632 53777768 -18376114 - LTR16A1 LTR ERVL 0 457 328 385 297 67 60 chr20 53778457 53778726 -18375156 - HERVL LTR ERVL -309 5345 5075 294 29 0 0 chr20 53779070 53779105 -18374777 + (TG)n Simple_repeat Simple_repeat 2 36 0 265 196 0 0 chr20 53779108 53779159 -18374723 + MER5A DNA MER1_type 26 76 -113 401 186 13 3 chr20 53779159 53779389 -18374493 + AluJo SINE Alu 1 290 -22 381 187 264 11 chr20 53779390 53779481 -18374401 + MER5A DNA MER1_type 66 179 -10 321 334 75 25 chr20 53779622 53780311 -18373571 - L1M4 LINE L1 -3112 3034 2311 1697 268 28 5 chr20 53780533 53780958 -18372924 + LTR16A LTR ERVL 16 450 0 539 290 43 35 chr20 53780962 53781193 -18372689 + L1MC4 LINE L1 7806 8038 -4 2826 128 62 8 chr20 53781349 53781819 -18372063 + Tigger1 DNA MER2_type 1 495 -1923 6909 115 26 9 chr20 53781819 53782998 -18370884 + L1MA3 LINE L1 5102 6304 -1 13227 120 12 2 chr20 53783005 53784932 -18368950 + Tigger1 DNA MER2_type 473 2418 0 618 197 0 0 chr20 53785928 53786055 -18367827 + (CA)n Simple_repeat Simple_repeat 2 128 0 301 281 91 77 chr20 53786287 53786640 -18367242 + HAL1 LINE L1 1222 1579 -928 322 332 46 23 chr20 53786965 53787182 -18366700 + L1MDa LINE L1 2404 2625 -3915 306 216 59 20 chr20 53787310 53787412 -18366470 - HERV16 LTR ERVL -448 5316 5211 3863 294 40 24 chr20 53787487 53787833 -18366049 - HERV16 LTR ERVL -1900 3096 2757 2394 142 56 141 chr20 53787833 53788036 -18365846 + MLT2B3 LTR ERVL 1 220 -334 189 0 0 0 chr20 53788036 53788057 -18365825 + (CAAAA)n Simple_repeat Simple_repeat 3 23 0 2394 142 56 141 chr20 53788057 53788458 -18365424 + MLT2B3 LTR ERVL 220 554 0 3863 294 40 24 chr20 53788458 53789990 -18363892 - HERV16 LTR ERVL -2239 2757 1688 2251 122 0 0 chr20 53790143 53790446 -18363436 - AluSx SINE Alu -9 303 1 3115 158 12 6 chr20 53790475 53790988 -18362894 + MER34 LTR ERV1 27 542 0 420 211 0 0 chr20 53791273 53791349 -18362533 + L1ME1 LINE L1 5584 5659 -507 1036 204 0 0 chr20 53791354 53791535 -18362347 + AluJb SINE Alu 129 309 -3 569 200 35 35 chr20 53791536 53791793 -18362089 + L1ME1 LINE L1 5657 6041 -125 719 203 19 115 chr20 53791996 53792094 -18361788 - MER106A DNA MER1_type 0 236 130 2577 69 0 0 chr20 53792094 53792399 -18361483 + AluY SINE Alu 1 305 -6 719 203 19 115 chr20 53792399 53792561 -18361321 - MER106A DNA MER1_type -106 130 1 3263 89 14 5 chr20 53793341 53793770 -18360112 + L1PA11 LINE L1 5742 6174 0 415 286 51 5 chr20 53793983 53794179 -18359703 - LTR40c LTR ERVL -88 377 173 1046 182 28 23 chr20 53795036 53795259 -18358623 + L1MC/D LINE L1 5591 5822 -329 1925 130 43 12 chr20 53795437 53795761 -18358121 - L1MD1 LINE L1 0 6636 6303 2069 110 4 4 chr20 53795825 53796270 -18357612 + AluSx SINE Alu 1 445 0 971 252 60 19 chr20 53796442 53796708 -18357174 + MER41E LTR ERV1 226 502 -10 3408 166 82 70 chr20 53796718 53798038 -18355844 - L1MD1 LINE L1 -330 6306 4991 2036 240 51 53 chr20 53798588 53799448 -18354434 - L1MD1 LINE L1 -1548 4992 4200 6685 177 25 3 chr20 53799457 53800593 -18353289 - MER52A LTR ERV1 0 1755 594 1051 258 120 21 chr20 53800594 53801060 -18352822 - L1MD1 LINE L1 -2352 4188 3677 2115 219 52 50 chr20 53801088 53801786 -18352096 - L1MD1 LINE L1 -5671 869 96 1047 173 50 58 chr20 53801795 53802073 -18351809 + L1MDa LINE L1 1323 1598 -4942 474 192 0 0 chr20 53802070 53802148 -18351734 - L1MD1 LINE L1 -6443 97 20 * 418 347 15 0 chr20 53802535 53802734 -18351148 - L1ME LINE L1 -625 5537 5336 459 61 30 0 chr20 53802940 53803057 -18350825 - AluSc SINE Alu 0 358 240 610 247 7 14 chr20 53803082 53803228 -18350654 + MER92B LTR ERV1 9 153 -483 326 217 0 0 chr20 53803270 53803330 -18350552 + MER92C LTR ERV1 484 543 -11 25 0 0 0 chr20 53803343 53803368 -18350514 + AT_rich Low_complexity Low_complexity 1 25 0 1615 158 4 0 chr20 53803395 53803648 -18350234 - L1MD3 LINE L1 -338 7657 7404 392 226 118 0 chr20 53803648 53803750 -18350132 - MLT1F1 LTR MaLR -442 125 12 1310 181 82 122 chr20 53803758 53803949 -18349933 - L1MC5 LINE L1 -455 7506 7309 2109 108 7 4 chr20 53803949 53804228 -18349654 - AluSx SINE Alu -32 280 1 1310 181 82 122 chr20 53804228 53804335 -18349547 - L1MC5 LINE L1 -652 7309 7199 1540 178 51 7 chr20 53804335 53804610 -18349272 - AluJb SINE Alu -25 287 1 1310 181 82 122 chr20 53804610 53804868 -18349014 - L1MC5 LINE L1 -762 7199 6971 233 311 41 8 chr20 53804902 53805024 -18348858 - L1M4 LINE L1 -2324 3822 3697 351 0 0 0 chr20 53805047 53805086 -18348796 + (CA)n Simple_repeat Simple_repeat 2 40 0 2381 80 3 0 chr20 53805936 53806225 -18347657 - AluSx SINE Alu -22 290 1 322 287 82 0 chr20 53806256 53806378 -18347504 + MIR SINE MIR 117 248 -14 340 309 81 15 chr20 53806487 53806623 -18347259 - MIR3 SINE MIR -62 146 2 276 287 196 14 chr20 53807491 53807634 -18346248 - MIR3 SINE MIR -15 193 25 919 185 64 0 chr20 53807886 53808059 -18345823 + MIR SINE MIR 8 191 -71 225 191 0 0 chr20 53808070 53808117 -18345765 + (TA)n Simple_repeat Simple_repeat 1 47 0 185 250 0 0 chr20 53808117 53808149 -18345733 + L2 LINE L2 3255 3286 -27 439 244 8 38 chr20 53808392 53808523 -18345359 - MLT1J LTR MaLR -384 127 1 226 325 7 26 chr20 53808644 53808795 -18345087 - L1M4 LINE L1 -3850 2296 2149 560 288 36 43 chr20 53809357 53809659 -18344223 - L1ME3A LINE L1 -224 5946 5647 287 272 168 8 chr20 53809721 53809846 -18344036 - MER20B DNA MER1_type -638 145 1 229 286 0 0 chr20 53809852 53809908 -18343974 - L1ME3A LINE L1 -520 5650 5595 281 200 0 0 chr20 53811558 53811608 -18342274 + Alu SINE Alu 249 298 -10 408 327 39 7 chr20 53811614 53811767 -18342115 - MIR SINE MIR -9 253 96 1019 170 21 16 chr20 53812469 53812657 -18341225 + MER5A DNA MER1_type 1 189 0 307 320 140 13 chr20 53812857 53813007 -18340875 + MIR SINE MIR 23 191 -71 507 307 73 18 chr20 53813044 53813262 -18340620 - MIR SINE MIR -12 250 21 1795 213 58 95 chr20 53814439 53815125 -18338757 - L1MC4 LINE L1 0 8042 7382 2385 72 0 0 chr20 53815594 53815887 -18337995 + AluY SINE Alu 1 293 -18 2789 132 50 2 chr20 53816223 53816662 -18337220 + LTR46 LTR ERV1 1 460 0 2147 115 0 26 chr20 53817437 53817750 -18336132 + AluSx SINE Alu 1 305 -7 1527 131 0 98 chr20 53819894 53820168 -18333714 + AluJb SINE Alu 7 253 -59 2015 85 19 7 chr20 53820168 53820438 -18333444 + AluY SINE Alu 21 293 -18 254 307 93 46 chr20 53820871 53820943 -18332939 + L1ME LINE L1 5350 5417 -704 207 0 0 0 chr20 53820943 53820966 -18332916 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2048 142 0 0 chr20 53820968 53821256 -18332626 - AluSx SINE Alu -24 288 1 254 307 93 46 chr20 53821256 53821633 -18332249 + L1ME LINE L1 5417 5823 -298 2365 179 66 49 chr20 53822550 53822752 -18331130 - MER66A LTR ERV1 0 478 281 2042 108 7 36 chr20 53822752 53823057 -18330825 - AluSx SINE Alu -16 296 1 2365 179 66 49 chr20 53823057 53823324 -18330558 - MER66A LTR ERV1 -197 281 1 2536 150 22 27 chr20 53823651 53823843 -18330039 - LTR57 LTR ERVL 0 411 220 2384 70 0 13 chr20 53823843 53824144 -18329738 - AluY SINE Alu -14 297 1 2536 150 22 27 chr20 53824144 53824364 -18329518 - LTR57 LTR ERVL -191 220 1 393 298 35 9 chr20 53824587 53824701 -18329181 - MIR3 SINE MIR -54 154 38 2566 256 66 20 chr20 53825152 53826555 -18327327 - L1ME3A LINE L1 -208 5962 4489 587 264 6 18 chr20 53826564 53826731 -18327151 + L2 LINE L2 2737 2901 -413 * 1019 283 143 26 chr20 53826725 53827471 -18326411 - L2 LINE L2 -49 3264 2431 304 259 115 99 chr20 53827471 53827977 -18325905 - L1ME3A LINE L1 -2659 3487 2974 375 209 93 62 chr20 53828102 53828231 -18325651 - L2 LINE L2 -2 3311 3179 2261 99 0 23 chr20 53828565 53828868 -18325014 + AluSg SINE Alu 1 296 -14 203 208 56 14 chr20 53829379 53829451 -18324431 + (CAGAGA)n Simple_repeat Simple_repeat 2 76 0 5534 176 61 13 chr20 53829683 53831071 -18322811 + L1MD2 LINE L1 4890 6358 -1 184 296 141 0 chr20 53831173 53831244 -18322638 - MIR3 SINE MIR -52 156 76 1539 216 7 0 chr20 53831799 53832109 -18321773 - AluJo SINE Alu 0 312 1 398 332 14 47 chr20 53832110 53832321 -18321561 + MIR SINE MIR 21 224 -38 3081 123 48 45 chr20 53832587 53833196 -18320686 - MER4B LTR ERV1 0 779 1 1090 186 21 3 chr20 53833490 53833798 -18320084 - MLT1D LTR MaLR 0 505 112 5232 120 51 21 chr20 53833798 53834667 -18319215 + MER4D LTR ERV1 1 895 -8 521 157 0 0 chr20 53834689 53834772 -18319110 - MLT1D LTR MaLR -422 83 1 1090 166 78 33 chr20 53836300 53836750 -18317132 + MLT1D LTR MaLR 1 450 0 363 349 65 24 chr20 53837234 53837671 -18316211 - L1MC4a LINE L1 -357 5764 5408 811 326 164 21 chr20 53837685 53838409 -18315473 - L1MC4a LINE L1 -767 5379 4552 1161 119 0 0 chr20 53840738 53840898 -18312984 + AluSg/x SINE Alu 133 292 -18 592 299 135 38 chr20 53841163 53841967 -18311915 - L1ME LINE L1 -535 6127 5240 2911 242 59 39 chr20 53842045 53842354 -18311528 - L1M4 LINE L1 -3654 2990 2688 766 219 36 36 chr20 53842354 53842573 -18311309 + MER20 DNA MER1_type 1 219 0 2911 242 59 39 chr20 53842573 53842892 -18310990 - L1M4 LINE L1 -3956 2688 2377 219 36 0 0 chr20 53842892 53842920 -18310962 + (TA)n Simple_repeat Simple_repeat 1 28 0 2911 242 59 39 chr20 53842920 53843611 -18310271 - L1M4 LINE L1 -4267 2377 1539 1746 135 66 0 chr20 53843863 53844152 -18309730 + AluSx SINE Alu 5 312 0 353 354 89 8 chr20 53844651 53844897 -18308985 + L1MC4a LINE L1 5627 5892 -1916 1677 127 0 23 chr20 53847318 53847578 -18306304 + AluSg SINE Alu 45 298 -12 909 87 0 0 chr20 53847974 53848089 -18305793 + AluSx SINE Alu 1 115 -198 412 208 79 10 chr20 53848089 53848190 -18305692 - LTR33 LTR ERVL -13 508 401 1168 110 12 0 chr20 53848239 53848412 -18305470 + AluSx SINE Alu 120 294 -18 530 238 71 24 chr20 53849706 53849874 -18304008 + MLT1C LTR MaLR 3 178 -289 1024 316 73 36 chr20 53850101 53850624 -18303258 - ERVL LTR ERVL -3519 2245 1704 452 198 69 0 chr20 53850859 53850960 -18302922 - LTR33 LTR ERVL -13 508 401 1672 252 155 12 chr20 53850994 53851573 -18302309 + MLT2F LTR ERVL 2 663 0 390 191 154 9 chr20 53851637 53851747 -18302135 - LTR33 LTR ERVL -391 130 5 733 296 209 8 chr20 53852229 53852631 -18301251 + L2 LINE L2 1367 1849 -1465 1043 235 92 20 chr20 53852647 53852898 -18300984 + MLT1F LTR MaLR 3 271 -271 1924 120 0 23 chr20 53852985 53853285 -18300597 + AluSx SINE Alu 1 293 -19 364 255 24 54 chr20 53854202 53854382 -18299500 + MIR SINE MIR 4 148 -60 226 286 0 0 chr20 53854870 53854926 -18298956 + L1ME1 LINE L1 5605 5660 -502 307 356 0 0 chr20 53855184 53855285 -18298597 + L1ME1 LINE L1 6065 6165 -1 194 322 0 67 chr20 53855523 53855613 -18298269 - L2 LINE L2 -182 3090 3007 199 274 84 62 chr20 53856204 53856383 -18297499 + L2 LINE L2 2880 3062 -210 585 227 44 169 chr20 53856451 53856752 -18297130 + MIR SINE MIR 1 262 0 196 271 71 12 chr20 53857928 53858013 -18295869 - MIR SINE MIR -44 218 129 361 200 67 0 chr20 53858117 53858192 -18295690 - MIR SINE MIR -86 122 43 235 330 57 19 chr20 53858669 53858775 -18295107 + MIR SINE MIR 35 144 -64 296 299 189 18 chr20 53858912 53859076 -18294806 - MIR3 SINE MIR -6 202 11 283 216 117 8 chr20 53859414 53859532 -18294350 - L1M LINE L1 -812 5334 5209 325 292 62 31 chr20 53859895 53860025 -18293857 + L2 LINE L2 3124 3257 -15 483 288 91 25 chr20 53860121 53860319 -18293563 + MIR SINE MIR 44 254 -8 1580 206 43 38 chr20 53860391 53860764 -18293118 - LTR16C LTR ERVL -6 485 111 310 253 329 0 chr20 53861254 53861400 -18292482 + MIR3 SINE MIR 12 205 -3 616 320 65 8 chr20 53861468 53861715 -18292167 - MIR SINE MIR 0 262 2 338 282 147 29 chr20 53861791 53861961 -18291921 + MIR SINE MIR 21 210 -52 186 203 62 62 chr20 53862382 53862446 -18291436 + MIR SINE MIR 118 181 -81 502 269 32 48 chr20 53862512 53862698 -18291184 + MIR SINE MIR 80 262 0 311 217 170 9 chr20 53864198 53864304 -18289578 + MIR3 SINE MIR 86 208 0 467 255 25 56 chr20 53865701 53865862 -18288020 - MIR SINE MIR -42 220 65 217 274 0 16 chr20 53865943 53866005 -18287877 + G-rich Low_complexity Low_complexity 2 62 0 1636 146 6 63 chr20 53866569 53866884 -18286998 - AluJb SINE Alu 0 312 16 632 229 38 109 chr20 53868379 53868589 -18285293 + MIR SINE MIR 62 256 -6 200 357 14 0 chr20 53868593 53868663 -18285219 - MIR3 SINE MIR -53 155 85 204 219 141 0 chr20 53868713 53868777 -18285105 + MIR3 SINE MIR 111 183 -25 918 233 0 12 chr20 53869453 53869625 -18284257 + MER91A DNA MER1_type 2 171 -25 188 230 203 14 chr20 53869744 53869818 -18284064 + MIR SINE MIR 43 130 -78 250 271 113 33 chr20 53869900 53870051 -18283831 + MER103 DNA DNA 2 164 -2 254 343 0 0 chr20 53870343 53870416 -18283466 + L2 LINE L2 3147 3219 -53 2362 75 0 0 chr20 53870602 53870896 -18282986 + AluSx SINE Alu 11 304 -8 2401 98 17 9 chr20 53870913 53871261 -18282621 + L1PA13 LINE L1 5807 6157 -6 564 275 56 73 chr20 53871439 53871672 -18282210 - MIR SINE MIR -14 248 20 523 313 21 70 chr20 53871828 53871958 -18281924 - MIR SINE MIR -12 250 136 1684 163 7 3 chr20 53871958 53872253 -18281629 + AluJb SINE Alu 1 296 -16 523 313 21 70 chr20 53872253 53872365 -18281517 - MIR SINE MIR -126 136 20 554 255 103 11 chr20 53872946 53873130 -18280752 - L2 LINE L2 0 3313 3113 2450 157 40 2 chr20 53873158 53873610 -18280272 + Charlie4a DNA MER1_type 17 485 -23 919 256 129 25 chr20 53873633 53874187 -18279695 - L2 LINE L2 -216 3097 2494 373 262 155 52 chr20 53874293 53874583 -18279299 + MLT1J LTR MaLR 1 320 -191 2326 63 3 0 chr20 53874836 53875136 -18278746 + AluY SINE Alu 1 301 -10 326 302 12 0 chr20 53875223 53875309 -18278573 - L2 LINE L2 0 3272 3186 1974 101 24 7 chr20 53875309 53875596 -18278286 - AluSx SINE Alu -20 292 1 297 314 92 20 chr20 53875864 53876017 -18277865 - L2 LINE L2 -67 3205 3042 203 308 31 0 chr20 53877101 53877166 -18276716 - MIR SINE MIR -87 175 109 248 300 60 20 chr20 53877515 53877615 -18276267 + MIR SINE MIR 80 183 -79 353 278 135 0 chr20 53877642 53877775 -18276107 - MIR SINE MIR -20 242 92 341 215 54 38 chr20 53878860 53879020 -18274862 + MIR SINE MIR 49 206 -56 322 310 43 59 chr20 53879218 53879473 -18274409 + L2 LINE L2 2841 3091 -181 941 128 21 4 chr20 53879492 53879785 -18274097 + (TCCA)n Simple_repeat Simple_repeat 2 474 0 1723 241 65 2 chr20 53879992 53880406 -18273476 + LTR16A LTR ERVL 1 440 -10 877 174 0 0 chr20 53880429 53880578 -18273304 + AluJo/FRAM SINE Alu 137 285 -17 388 0 0 0 chr20 53880579 53880622 -18273260 + (TAAAA)n Simple_repeat Simple_repeat 3 85 0 280 286 45 27 chr20 53880632 53880744 -18273138 + L2 LINE L2 3200 3313 0 861 89 81 16 chr20 53881154 53881278 -18272604 + AluSq SINE Alu 1 132 -180 417 193 14 0 chr20 53881294 53881375 -18272507 + LTR16A LTR ERVL 193 274 -176 * 1416 100 0 11 chr20 53881371 53881561 -18272321 + AluSq SINE Alu 114 301 -12 506 265 61 33 chr20 53881683 53881864 -18272018 - MIR SINE MIR -12 250 65 224 281 89 30 chr20 53881899 53882034 -18271848 + MIR SINE MIR 84 226 -36 224 310 46 0 chr20 53883331 53883418 -18270464 + MIR3 SINE MIR 88 178 -30 778 206 127 0 chr20 53883422 53883611 -18270271 + MER58A DNA MER1_type 9 221 -3 543 233 82 19 chr20 53884202 53884361 -18269521 - MIR SINE MIR -51 211 43 232 317 108 0 chr20 53886275 53886395 -18267487 - MER117 DNA MER1_type -47 150 18 226 333 65 0 chr20 53886475 53886583 -18267299 + MIR SINE MIR 120 234 -28 324 308 9 19 chr20 53887764 53887871 -18266011 + MIR3 SINE MIR 54 159 -49 252 368 8 23 chr20 53888265 53888398 -18265484 + L3b LINE CR1 1104 1234 -349 859 204 30 39 chr20 53889099 53889330 -18264552 + MIR SINE MIR 14 242 -20 407 306 122 40 chr20 53893570 53894057 -18259825 + L2 LINE L2 2652 3179 -93 1666 283 126 14 chr20 53894660 53895188 -18258694 + MER20B DNA MER1_type 43 661 -122 2434 79 3 16 chr20 53895188 53895504 -18258378 - AluSp SINE Alu -1 312 1 1666 283 126 14 chr20 53895504 53895635 -18258247 + MER20B DNA MER1_type 661 776 -7 1174 240 68 57 chr20 53895643 53896173 -18257709 + L2 LINE L2 2183 2718 -596 979 201 5 27 chr20 53896200 53896424 -18257458 - MER20 DNA MER1_type 0 219 1 182 171 57 0 chr20 53896780 53896815 -18257067 - L3 LINE CR1 -13 1564 1528 500 263 68 0 chr20 53897094 53897227 -18256655 + MIR SINE MIR 2 143 -119 1298 290 152 29 chr20 53897277 53897426 -18256456 + L2 LINE L2 1755 1884 -1430 2168 95 44 0 chr20 53897426 53897721 -18256161 - AluSp SINE Alu -5 308 1 1298 290 152 29 chr20 53897721 53898434 -18255448 + L2 LINE L2 1884 2723 -591 228 107 0 89 chr20 53899131 53899187 -18254695 + (CGGGG)n Simple_repeat Simple_repeat 4 54 0 189 74 0 0 chr20 53900510 53900537 -18253345 + (TG)n Simple_repeat Simple_repeat 1 27 0 1714 233 106 64 chr20 53904031 53904617 -18249265 + L1MC5 LINE L1 6970 7609 -352 396 0 0 0 chr20 53904617 53904661 -18249221 + (TG)n Simple_repeat Simple_repeat 2 45 0 1714 233 106 64 chr20 53904661 53904979 -18248903 + L1MC5 LINE L1 7609 7912 -49 703 258 98 22 chr20 53905536 53905761 -18248121 - MIR SINE MIR -8 254 13 240 191 124 11 chr20 53905876 53905965 -18247917 - MIR SINE MIR -71 137 39 243 308 126 31 chr20 53906858 53907017 -18246865 + MIR SINE MIR 22 195 -67 2067 114 0 0 chr20 53907040 53907312 -18246570 + AluSq SINE Alu 37 308 -5 354 289 205 12 chr20 53907375 53907541 -18246341 + L1ME4a LINE L1 5870 6067 -54 1833 143 19 57 chr20 53908583 53908897 -18244985 - AluJo SINE Alu -10 302 1 247 250 73 40 chr20 53909425 53909549 -18244333 + L2 LINE L2 3133 3260 -12 274 207 27 36 chr20 53910986 53911097 -18242785 + CT-rich Low_complexity Low_complexity 2 111 0 905 207 62 0 chr20 53911476 53911669 -18242213 - MER3 DNA MER1_type 0 209 5 1073 202 53 8 chr20 53911823 53912085 -18241797 + MER33 DNA MER1_type 51 324 0 468 263 109 0 chr20 53912149 53912305 -18241577 - MER3 DNA MER1_type 0 209 37 359 235 294 0 chr20 53913404 53913540 -18240342 - MIR SINE MIR -21 241 66 2386 92 0 3 chr20 53913656 53913949 -18239933 - AluSq SINE Alu -21 292 1 225 188 31 16 chr20 53914823 53914887 -18238995 + (TAA)n Simple_repeat Simple_repeat 1 65 0 460 337 86 5 chr20 53917163 53917350 -18236532 - MIR3 SINE MIR -3 205 4 302 292 26 53 chr20 53917392 53917505 -18236377 - MIR SINE MIR -79 183 74 1080 199 42 5 chr20 53917644 53917860 -18236022 + MER58A DNA MER1_type 1 224 0 517 264 137 9 chr20 53918271 53918483 -18235399 + L1ME4a LINE L1 5590 5828 -293 353 251 187 12 chr20 53918669 53918920 -18234962 + L1ME4a LINE L1 5825 6119 -2 1679 168 47 30 chr20 53919332 53919629 -18234253 + AluJo SINE Alu 1 302 -10 391 233 75 13 chr20 53920119 53920269 -18233613 - MIR SINE MIR -63 145 34 191 360 27 0 chr20 53920532 53920607 -18233275 - L2 LINE L2 -523 2791 2715 306 305 145 0 chr20 53921304 53921435 -18232447 - L3 LINE CR1 -11 1566 1417 189 0 0 0 chr20 53922288 53922309 -18231573 + (A)n Simple_repeat Simple_repeat 1 21 0 331 295 126 11 chr20 53922495 53922678 -18231204 + MIR SINE MIR 49 252 -10 230 257 110 9 chr20 53922753 53922862 -18231020 - MIR SINE MIR -26 236 117 240 35 0 0 chr20 53923248 53923277 -18230605 + (TG)n Simple_repeat Simple_repeat 1 29 0 715 278 12 69 chr20 53924161 53924226 -18229656 + L3 LINE CR1 1333 1400 -177 1676 183 17 7 chr20 53924226 53924526 -18229356 + AluJo SINE Alu 2 304 -8 2291 104 0 0 chr20 53924528 53924837 -18229045 + AluSg SINE Alu 1 309 0 715 278 12 69 chr20 53924837 53925012 -18228870 + L3 LINE CR1 1401 1563 -14 784 294 17 8 chr20 53925869 53926107 -18227775 + MIR SINE MIR 2 241 -21 469 366 56 15 chr20 53926518 53926928 -18226954 + L2 LINE L2 1671 2097 -1217 576 288 118 75 chr20 53926929 53927723 -18226159 + L2 LINE L2 2444 3271 -1 412 230 62 87 chr20 53930421 53930637 -18223245 - MIR SINE MIR -1 261 56 839 177 38 105 chr20 53931005 53931318 -18222564 - L1ME3 LINE L1 -1 6163 5880 283 289 0 12 chr20 53931474 53931557 -18222325 + MIR3 SINE MIR 120 201 -7 327 264 82 31 chr20 53931712 53931871 -18222011 + MARNA DNA Mariner 219 385 -201 1809 139 0 4 chr20 53932043 53932323 -18221559 + AluSx SINE Alu 1 279 -33 186 118 0 0 chr20 53932323 53932357 -18221525 + (CATA)n Simple_repeat Simple_repeat 1 34 0 2178 118 0 10 chr20 53932955 53933268 -18220614 - AluSq SINE Alu -3 310 1 218 327 0 0 chr20 53933344 53933399 -18220483 - MIR SINE MIR -115 147 93 960 211 30 10 chr20 53933585 53933784 -18220098 - MIR SINE MIR -21 241 39 288 295 106 68 chr20 53933978 53934185 -18219697 + L2 LINE L2 2859 3073 -199 1686 130 91 3 chr20 53934536 53934821 -18219061 + AluJo SINE Alu 1 310 -2 183 180 20 60 chr20 53935747 53935797 -18218085 + L2 LINE L2 3170 3217 -96 311 267 112 78 chr20 53936349 53936607 -18217275 + L2 LINE L2 2894 3160 -112 210 327 0 0 chr20 53936668 53936723 -18217159 + MER5A DNA MER1_type 128 182 -7 191 235 12 74 chr20 53936755 53936836 -18217046 + MER5B DNA MER1_type 1 76 -102 308 304 130 7 chr20 53937342 53937480 -18216402 - MIR3 SINE MIR -52 156 2 308 213 75 0 chr20 53937490 53937570 -18216312 + MIR3 SINE MIR 109 194 -14 334 298 64 0 chr20 53937646 53937740 -18216142 + MIR SINE MIR 121 220 -42 261 224 0 0 chr20 53937985 53938034 -18215848 + L2 LINE L2 3250 3298 -15 283 308 37 19 chr20 53938073 53938180 -18215702 - MER102b DNA MER1_type -3 338 230 29 47 0 0 chr20 53938542 53938585 -18215297 + AT_rich Low_complexity Low_complexity 1 43 0 393 264 124 8 chr20 53938639 53938768 -18215114 - MIR3 SINE MIR -5 203 60 3167 147 2 10 chr20 53938789 53939279 -18214603 + MER66B LTR ERV1 1 486 0 1045 189 20 3 chr20 53989559 53989787 -18164095 - MLT2B1 LTR ERVL -187 227 1 6978 78 17 0 chr20 53989991 53991856 -18162026 + L1PA14 LINE L1 4252 6160 -1 237 276 26 13 chr20 53992196 53992272 -18161610 + MLT1K LTR MaLR 341 417 -171 1520 262 42 5 chr20 53992301 53992687 -18161195 + MLT1K LTR MaLR 126 525 -63 225 363 62 0 chr20 53992846 53992959 -18160923 + L2 LINE L2 3121 3240 -32 342 269 126 8 chr20 53993031 53993150 -18160732 - MIR SINE MIR -99 163 31 715 274 80 24 chr20 53994284 53994496 -18159386 - MIR SINE MIR -34 228 5 572 226 19 52 chr20 53994500 53994655 -18159227 + MER112 DNA MER1_type 2 151 -109 1799 204 37 61 chr20 53994814 53995261 -18158621 + MLT1D LTR MaLR 5 440 -65 2353 97 7 0 chr20 53995261 53995570 -18158312 + AluSq SINE Alu 3 313 0 1799 204 37 61 chr20 53995570 53995631 -18158251 + MLT1D LTR MaLR 440 501 -4 2066 136 0 0 chr20 53995803 53996097 -18157785 - AluSx SINE Alu -18 294 1 574 214 36 21 chr20 53996097 53996282 -18157600 - MER106B DNA MER1_type -32 1027 14 631 153 25 92 chr20 53996339 53996502 -18157380 + MER106B DNA MER1_type 904 1055 -4 479 238 19 0 chr20 53996732 53996837 -18157045 + Charlie8 DNA MER1_type 92 198 -2219 1542 180 18 11 chr20 53996839 53997111 -18156771 + AluJo SINE Alu 1 274 -38 506 243 76 22 chr20 53997275 53997460 -18156422 - MIR SINE MIR 0 262 68 2009 212 79 55 chr20 53997463 53998066 -18155816 - MLT1G LTR MaLR -3 587 1 277 217 17 0 chr20 53998066 53998126 -18155756 - MIR SINE MIR -190 72 12 * 371 252 0 19 chr20 53998124 53998227 -18155655 + MIR SINE MIR 156 256 -6 857 180 36 52 chr20 53999178 53999515 -18154367 - Charlie1 DNA MER1_type -5 2756 49 185 105 0 26 chr20 53999570 53999608 -18154274 + (TC)n Simple_repeat Simple_repeat 2 38 0 194 61 0 30 chr20 53999757 53999779 -18154103 + (GGAAA)n Simple_repeat Simple_repeat 4 26 -9 1480 162 11 25 chr20 53999779 54000057 -18153825 + AluJb SINE Alu 39 312 0 194 61 0 30 chr20 54000057 54000067 -18153815 + (GGAAA)n Simple_repeat Simple_repeat 26 35 0 702 269 92 9 chr20 54000379 54000606 -18153276 - MER113 DNA MER1_type? -57 464 219 441 0 0 0 chr20 54000607 54000656 -18153226 + (TA)n Simple_repeat Simple_repeat 2 50 0 324 0 0 0 chr20 54000655 54000691 -18153191 + (GA)n Simple_repeat Simple_repeat 2 37 0 * 263 208 6 30 chr20 54000695 54000869 -18153013 + (TA)n Simple_repeat Simple_repeat 1 169 0 246 165 24 12 chr20 54000890 54000975 -18152907 + (TA)n Simple_repeat Simple_repeat 2 87 0 389 246 14 14 chr20 54000996 54001138 -18152744 + (TA)n Simple_repeat Simple_repeat 1 142 0 505 262 19 43 chr20 54001143 54001353 -18152529 - MER113 DNA MER1_type? -315 206 2 276 146 61 85 chr20 54001370 54001452 -18152430 + MIR SINE MIR 30 109 -153 228 316 70 18 chr20 54001575 54001689 -18152193 - MIR SINE MIR -49 213 94 964 275 185 25 chr20 54002531 54003051 -18150831 - L2 LINE L2 -337 2977 2375 186 192 0 0 chr20 54003065 54003117 -18150765 + (TG)n Simple_repeat Simple_repeat 1 52 0 215 323 31 15 chr20 54003127 54003257 -18150625 - L2 LINE L2 -921 2393 2262 1979 122 13 22 chr20 54003407 54003719 -18150163 + AluSx SINE Alu 1 309 -3 988 269 81 42 chr20 54004021 54004493 -18149389 + MLT1H LTR MaLR 3 492 -57 299 299 31 0 chr20 54004527 54004624 -18149258 + MIR SINE MIR 107 206 -56 728 255 13 60 chr20 54004744 54004817 -18149065 - MIR SINE MIR -17 245 170 1448 219 56 7 chr20 54004817 54005105 -18148777 + AluJo SINE Alu 1 302 0 728 255 13 60 chr20 54005105 54005266 -18148616 - MIR SINE MIR -92 170 22 2416 99 0 0 chr20 54005291 54005595 -18148287 + AluSx SINE Alu 1 304 -8 606 146 0 10 chr20 54006434 54006537 -18147345 - MER53 DNA DNA -87 102 1 1199 234 87 21 chr20 54006597 54006986 -18146896 + MER113 DNA MER1_type? 59 473 -48 586 161 0 54 chr20 54006986 54007098 -18146784 - FLAM_C SINE Alu 0 143 38 442 244 67 22 chr20 54007698 54007833 -18146049 + L1ME3A LINE L1 6030 6170 0 2752 200 30 4 chr20 54007845 54008348 -18145534 + L1MB3 LINE L1 5634 6122 -61 225 0 0 0 chr20 54008348 54008373 -18145509 + (TA)n Simple_repeat Simple_repeat 1 25 0 2009 128 3 39 chr20 54008373 54008679 -18145203 - AluSx SINE Alu -17 295 1 2752 200 30 4 chr20 54008679 54008708 -18145174 + L1MB3 LINE L1 6121 6181 -2 897 226 98 0 chr20 54009067 54009271 -18144611 - MER58A DNA MER1_type 0 224 1 449 276 70 40 chr20 54009289 54009488 -18144394 + MIR SINE MIR 2 206 -56 1827 98 8 0 chr20 54010041 54010285 -18143597 + AluSx SINE Alu 58 303 -9 2164 180 75 8 chr20 54010389 54010790 -18143092 + MSTA LTR MaLR 1 428 0 2761 106 79 20 chr20 54011292 54011331 -18142551 - MSTA LTR MaLR 0 428 393 2605 65 0 0 chr20 54011331 54011639 -18142243 + AluY SINE Alu 1 308 -3 2761 106 79 20 chr20 54011639 54012003 -18141879 - MSTA LTR MaLR -35 393 1 2409 68 0 0 chr20 54012424 54012716 -18141166 - AluY SINE Alu -19 292 1 1363 236 69 3 chr20 54012768 54013086 -18140796 - MER58B DNA MER1_type -1 340 2 358 312 0 14 chr20 54013342 54013483 -18140399 - L1ME3A LINE L1 -221 5949 5811 332 220 99 73 chr20 54013648 54013839 -18140043 - LTR33A LTR ERVL -343 180 20 2408 70 3 0 chr20 54013880 54014178 -18139704 - AluY SINE Alu -12 299 1 182 285 20 93 chr20 54014476 54014627 -18139255 - L2 LINE L2 -40 3273 3134 415 370 12 17 chr20 54014632 54014805 -18139077 - MER117 DNA MER1_type 0 197 26 253 312 145 72 chr20 54014854 54015130 -18138752 - L2 LINE L2 -10 3262 2967 1155 207 36 115 chr20 54015130 54015521 -18138361 - MLT1K LTR MaLR 0 588 229 210 319 125 19 chr20 54015667 54015883 -18137999 - L2 LINE L2 -354 2960 2722 715 233 84 25 chr20 54016811 54017013 -18136869 + MIR SINE MIR 14 227 -35 495 242 48 0 chr20 54017121 54017245 -18136637 + MER69 DNA AcHobo 9 138 -2388 2119 121 7 0 chr20 54017252 54017549 -18136333 - AluSx SINE Alu -13 299 1 279 210 16 0 chr20 54017564 54017626 -18136256 + MER69 DNA AcHobo 2455 2517 -9 394 214 135 13 chr20 54017645 54017775 -18136107 - MIR SINE MIR -65 143 11 279 0 0 0 chr20 54017882 54017913 -18135969 + (TGAA)n Simple_repeat Simple_repeat 1 31 0 315 316 144 14 chr20 54018354 54018569 -18135313 - L3 LINE CR1 -24 1553 1311 2041 224 19 33 chr20 54018713 54018905 -18134977 + L1ME1 LINE L1 5596 5789 -377 3097 189 100 26 chr20 54018905 54019587 -18134295 - MER44D DNA MER2_type -1 604 1 2041 224 19 33 chr20 54019587 54019912 -18133970 + L1ME1 LINE L1 5789 6106 -60 795 209 74 6 chr20 54019912 54020075 -18133807 + FRAM SINE Alu 1 169 -7 1841 144 7 11 chr20 54020075 54020387 -18133495 + AluSx SINE Alu 1 311 0 235 178 22 0 chr20 54020387 54020432 -18133450 + L1ME3 LINE L1 6097 6142 -20 22 0 0 0 chr20 54020579 54020601 -18133281 + AT_rich Low_complexity Low_complexity 1 22 0 339 241 135 57 chr20 54020691 54020966 -18132916 + L1MC3 LINE L1 5620 5771 -391 610 236 200 0 chr20 54021100 54021265 -18132617 + MIR SINE MIR 14 211 -51 24 53 0 0 chr20 54021347 54021385 -18132497 + AT_rich Low_complexity Low_complexity 1 38 0 204 125 0 0 chr20 54021422 54021454 -18132428 + (TATATG)n Simple_repeat Simple_repeat 2 33 0 320 209 55 18 chr20 54021454 54021564 -18132318 - L1ME4a LINE L1 -61 6060 5947 614 270 22 110 chr20 54021788 54021834 -18132048 + MLT1L LTR MaLR 131 179 -436 2049 129 10 7 chr20 54021834 54022144 -18131738 + AluSx SINE Alu 1 311 -1 614 270 22 110 chr20 54022144 54022499 -18131383 + MLT1L LTR MaLR 179 602 -13 441 229 61 15 chr20 54022503 54022634 -18131248 - L1ME4a LINE L1 -22 6099 5963 1523 203 26 10 chr20 54023773 54024079 -18129803 + AluJo SINE Alu 1 311 -1 552 237 20 10 chr20 54024169 54024320 -18129562 + MIR SINE MIR 24 173 -64 1609 193 83 19 chr20 54024342 54024762 -18129120 - L1ME2 LINE L1 -9 6950 6504 * 8550 233 76 48 chr20 54024760 54024795 -18129087 - L1ME2 LINE L1 -976 5965 5932 2430 84 3 0 chr20 54024795 54025094 -18128788 - AluY SINE Alu -11 300 1 8550 233 76 48 chr20 54025094 54025160 -18128722 - L1ME2 LINE L1 -1009 5932 5869 1062 119 0 182 chr20 54025160 54025396 -18128486 + 7SK RNA RNA 1 193 0 8550 233 76 48 chr20 54025396 54029396 -18124486 - L1ME2 LINE L1 -1072 5869 1706 267 256 122 0 chr20 54029987 54030077 -18123805 - L1ME2 LINE L1 -5381 1560 1460 549 305 47 27 chr20 54030079 54030377 -18123505 - L1ME2 LINE L1 -4991 1432 1129 2225 125 0 6 chr20 54030513 54030826 -18123056 - AluSx SINE Alu -1 311 1 24 0 0 0 chr20 54031058 54031082 -18122800 + AT_rich Low_complexity Low_complexity 1 24 0 2581 222 57 57 chr20 54031129 54031249 -18122633 - L1ME1 LINE L1 0 6235 6117 2375 103 0 0 chr20 54031249 54031560 -18122322 + AluY SINE Alu 1 311 0 2581 222 57 57 chr20 54031560 54032326 -18121556 - L1ME1 LINE L1 -118 6117 5341 2043 135 3 7 chr20 54032326 54032629 -18121253 - AluJb SINE Alu -10 302 1 2581 222 57 57 chr20 54032629 54033076 -18120806 - L1ME1 LINE L1 -894 5341 4896 280 274 11 11 chr20 54033081 54033176 -18120706 - L1ME1 LINE L1 -2028 4187 4093 2962 63 3 0 chr20 54033185 54033537 -18120345 - L1PA8 LINE L1 -1 6171 5819 1358 239 58 10 chr20 54033537 54033957 -18119925 - L1ME1 LINE L1 -3648 2567 2174 1501 152 22 27 chr20 54033990 54034302 -18119580 - MLT1B LTR MaLR 0 390 2 1652 268 88 38 chr20 54034308 54035149 -18118733 - L1ME1 LINE L1 -4260 2136 1254 485 268 29 14 chr20 54035211 54035349 -18118533 + MER5A DNA MER1_type 50 189 0 1356 282 31 33 chr20 54035599 54036057 -18117825 - MLT1K LTR MaLR -4 584 128 302 270 0 20 chr20 54036256 54036356 -18117526 + MER5B DNA MER1_type 1 98 -80 956 283 75 31 chr20 54036446 54036806 -18117076 + MLT1K LTR MaLR 62 437 -151 484 204 0 0 chr20 54037058 54037156 -18116726 - L2 LINE L2 0 3313 3216 447 198 21 10 chr20 54037156 54037252 -18116630 - Charlie7 DNA MER1_type -794 1818 1722 181 288 17 0 chr20 54037363 54037422 -18116460 - L2 LINE L2 -537 2777 2718 349 167 0 0 chr20 54037428 54037488 -18116394 + MIR SINE MIR 88 147 -61 3197 221 24 4 chr20 54037500 54038200 -18115682 + L1MC4a LINE L1 7095 7808 0 1942 230 73 73 chr20 54038821 54039595 -18114287 - Charlie7 DNA MER1_type 0 2612 1836 2300 125 0 0 chr20 54039595 54039907 -18113975 + AluSq SINE Alu 1 312 -1 1942 230 73 73 chr20 54039907 54040023 -18113859 - Charlie7 DNA MER1_type -775 1837 1722 638 252 104 16 chr20 54040410 54040695 -18113187 + MER115 DNA AcHobo 338 693 0 393 341 19 35 chr20 54041177 54041435 -18112447 - Charlie7 DNA MER1_type -2323 289 36 278 321 200 0 chr20 54041635 54041775 -18112107 + MIR3 SINE MIR 3 170 -38 673 229 84 84 chr20 54041803 54042126 -18111756 - MER102a DNA MER1_type -3 327 5 1834 138 3 64 chr20 54043208 54043534 -18110348 + AluJo SINE Alu 1 306 -6 503 282 15 8 chr20 54043539 54043670 -18110212 + MLT1E LTR MaLR 45 176 -417 764 115 0 18 chr20 54043683 54043796 -18110086 - FLAM_A SINE Alu -14 128 18 479 17 17 0 chr20 54043821 54043881 -18110001 + (TG)n Simple_repeat Simple_repeat 1 61 0 1220 203 49 120 chr20 54043913 54044322 -18109560 + MLT1E LTR MaLR 214 593 0 195 326 137 0 chr20 54044376 54044471 -18109411 - MIR3 SINE MIR -41 167 60 420 111 0 0 chr20 54044564 54044627 -18109255 + (TA)n Simple_repeat Simple_repeat 1 63 0 34 0 0 0 chr20 54044659 54044693 -18109189 + AT_rich Low_complexity Low_complexity 1 34 0 290 338 57 24 chr20 54044698 54045032 -18108850 - L1MC/D LINE L1 -2198 5610 5266 766 209 0 0 chr20 54045066 54045205 -18108677 + FRAM SINE Alu 5 143 -33 237 33 0 0 chr20 54045208 54045238 -18108644 + (TAA)n Simple_repeat Simple_repeat 1 30 0 221 0 35 0 chr20 54045296 54045325 -18108557 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 1710 137 4 23 chr20 54045346 54045609 -18108273 - AluJb SINE Alu -54 258 1 2261 120 0 0 chr20 54046032 54046331 -18107551 - AluSx SINE Alu -13 299 1 444 221 80 0 chr20 54046888 54047001 -18106881 + L1MC4 LINE L1 6463 6584 -1458 1252 266 30 12 chr20 54047017 54047351 -18106531 + MER45C DNA AcHobo 1 340 -613 1874 236 59 5 chr20 54047377 54047817 -18106065 + MER45C DNA AcHobo 490 953 0 1297 232 57 60 chr20 54047818 54048006 -18105876 + L1MC4 LINE L1 6595 6782 -1260 180 0 0 0 chr20 54048006 54048026 -18105856 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 1856 163 11 0 chr20 54048026 54048303 -18105579 - AluJo SINE Alu -32 280 1 1297 232 57 60 chr20 54048303 54048496 -18105386 + L1MC4 LINE L1 6780 6976 -1066 1206 185 82 0 chr20 54048493 54048736 -18105146 + L1MC4 LINE L1 7285 7547 -495 * 238 201 40 17 chr20 54048800 54048974 -18104908 + (TATAG)n Simple_repeat Simple_repeat 2 179 0 21 107 0 0 chr20 54048993 54049077 -18104805 + AT_rich Low_complexity Low_complexity 1 84 0 1373 169 128 22 chr20 54049154 54049427 -18104455 - AluJo SINE Alu 0 302 1 442 114 57 0 chr20 54049431 54049501 -18104381 - MSTC LTR MaLR -354 74 1 1588 171 105 26 chr20 54050945 54051132 -18102750 + Charlie4a DNA MER1_type 7 178 -1783 1862 124 0 36 chr20 54051132 54051430 -18102452 - AluSx SINE Alu 0 307 20 1588 171 105 26 chr20 54051430 54051592 -18102290 + Charlie4a DNA MER1_type 178 385 -123 396 248 39 23 chr20 54051595 54051639 -18102243 - L1MA10 LINE L1 -35 6299 6256 2909 229 41 41 chr20 54051639 54051822 -18102060 - L1ME1 LINE L1 -67 6099 5917 2015 142 3 26 chr20 54051822 54052133 -18101749 + AluSx SINE Alu 1 304 -8 2909 229 41 41 chr20 54052133 54052808 -18101074 - L1ME1 LINE L1 -249 5917 5241 1033 76 0 55 chr20 54052965 54053110 -18100772 + AluSg/x SINE Alu 159 295 -17 745 197 101 0 chr20 54053111 54053289 -18100593 + L1M4 LINE L1 5028 5223 -923 574 53 80 0 chr20 54053381 54053456 -18100426 - LTR8 LTR ERV1 -610 81 1 389 165 200 0 chr20 54053459 54053544 -18100338 - MER94 DNA DNA -1 133 32 413 292 58 0 chr20 54053963 54054100 -18099782 - L2 LINE L2 -225 3088 2944 341 135 0 0 chr20 54054301 54054353 -18099529 - AluJ/FLAM SINE Alu -220 82 31 339 191 0 0 chr20 54054355 54054418 -18099464 - L1ME1 LINE L1 -950 5196 5134 457 103 0 0 chr20 54054419 54054505 -18099377 - Alu SINE Alu 0 307 222 1380 202 35 41 chr20 54054536 54054820 -18099062 - MLT1A1 LTR MaLR 0 365 82 2393 78 3 3 chr20 54054820 54055127 -18098755 - AluY SINE Alu -4 307 1 1380 202 35 41 chr20 54055127 54055209 -18098673 - MLT1A1 LTR MaLR -283 82 1 210 37 0 0 chr20 54055629 54055656 -18098226 + (TC)n Simple_repeat Simple_repeat 2 28 0 2401 102 0 0 chr20 54055839 54056144 -18097738 + AluSp SINE Alu 1 305 -8 785 171 28 61 chr20 54057125 54057188 -18096694 - MER5B DNA MER1_type -1 177 113 2334 118 0 0 chr20 54057188 54057493 -18096389 + AluSx SINE Alu 1 305 -7 785 171 28 61 chr20 54057493 54057610 -18096272 - MER5B DNA MER1_type -65 113 3 300 213 50 0 chr20 54057845 54057925 -18095957 + L1MC4 LINE L1 6618 6701 -1341 2032 156 0 6 chr20 54057958 54058284 -18095598 - MER47A DNA MER2_type -42 324 1 192 182 0 0 chr20 54058311 54058355 -18095527 + (TA)n Simple_repeat Simple_repeat 2 45 0 325 304 29 43 chr20 54058537 54058675 -18095207 - MIR SINE MIR -10 252 117 872 207 11 0 chr20 54058827 54059015 -18094867 - MER69 DNA AcHobo 0 2526 2337 727 224 110 37 chr20 54059011 54059256 -18094626 - MER69 DNA AcHobo -2245 281 19 * 259 263 197 20 chr20 54059292 54059444 -18094438 + MIR SINE MIR 18 196 -66 579 241 32 0 chr20 54059476 54059634 -18094248 + MER53 DNA DNA 16 178 -11 215 224 0 0 chr20 54059865 54059922 -18093960 + MIR SINE MIR 89 145 -63 716 261 106 27 chr20 54059940 54060270 -18093612 + L2 LINE L2 2958 3313 0 206 308 0 0 chr20 54060659 54060724 -18093158 + (CGG)n Simple_repeat Simple_repeat 1 65 0 24 53 0 0 chr20 54060761 54060799 -18093083 + GC_rich Low_complexity Low_complexity 1 38 0 21 0 0 0 chr20 54062793 54062814 -18091068 + AT_rich Low_complexity Low_complexity 1 21 0 229 61 20 41 chr20 54064067 54064116 -18089766 + (TTTTTG)n Simple_repeat Simple_repeat 2 49 0 270 0 0 0 chr20 54064221 54064251 -18089631 + (CA)n Simple_repeat Simple_repeat 2 31 0 289 353 60 0 chr20 54064807 54064974 -18088908 - MIR SINE MIR -3 259 83 523 214 139 19 chr20 54068164 54068365 -18085517 - MIR SINE MIR -13 249 31 576 186 106 18 chr20 54068634 54068747 -18085135 + MER58B DNA MER1_type 218 340 -1 608 278 30 39 chr20 54069338 54069568 -18084314 + MIR SINE MIR 8 235 -27 243 282 64 75 chr20 54069599 54069787 -18084095 + MIR SINE MIR 74 259 -3 324 293 96 50 chr20 54069877 54070116 -18083766 + MIR SINE MIR 13 262 0 202 306 65 0 chr20 54070717 54070779 -18083103 + MIR SINE MIR 116 181 -81 215 288 160 0 chr20 54070976 54071101 -18082781 - MIR SINE MIR -26 236 92 260 293 58 7 chr20 54071531 54071677 -18082205 + MIR SINE MIR 59 214 -48 814 263 18 4 chr20 54072390 54072618 -18081264 - MIR SINE MIR -19 243 13 313 221 115 10 chr20 54072806 54072910 -18080972 + MIR SINE MIR 35 149 -113 188 230 81 14 chr20 54073228 54073302 -18080580 - MIR SINE MIR -72 136 58 1896 137 14 0 chr20 54073383 54073693 -18080189 + AluSx SINE Alu 1 314 0 627 247 31 16 chr20 54073931 54074125 -18079757 - L2 LINE L2 0 3313 3117 352 188 177 0 chr20 54074479 54074575 -18079307 - Charlie8 DNA MER1_type -2214 203 91 333 0 0 0 chr20 54074697 54074734 -18079148 + (T)n Simple_repeat Simple_repeat 1 37 0 351 240 47 54 chr20 54075337 54075466 -18078416 - MLT1K LTR MaLR -24 564 437 2526 120 67 10 chr20 54075898 54076299 -18077583 - MSTA LTR MaLR 0 428 5 1046 283 66 43 chr20 54076563 54077002 -18076880 + Charlie8 DNA MER1_type 1 449 -1968 318 149 0 0 chr20 54077011 54077058 -18076824 - MER20 DNA MER1_type 0 219 173 279 0 0 0 chr20 54077058 54077089 -18076793 + (TG)n Simple_repeat Simple_repeat 2 32 0 250 246 14 29 chr20 54077321 54077390 -18076492 + L3 LINE CR1 1463 1530 -47 2631 135 36 5 chr20 54077468 54077906 -18075976 + L1MA4 LINE L1 5841 6292 -8 1753 237 119 32 chr20 54078263 54078507 -18075375 - L2 LINE L2 0 3313 3092 2954 6 0 6 chr20 54078507 54078826 -18075056 - AluYb8 SINE Alu -1 317 1 1753 237 119 32 chr20 54078826 54078860 -18075022 - L2 LINE L2 -221 3092 3062 611 211 108 41 chr20 54078860 54079054 -18074828 + MER63A DNA MER1_type 4 210 0 1753 237 119 32 chr20 54079054 54079659 -18074223 - L2 LINE L2 -251 3062 2358 194 270 60 30 chr20 54079723 54079823 -18074059 - MIR SINE MIR -110 152 50 203 233 147 52 chr20 54080182 54080212 -18073670 + MIR SINE MIR 117 143 -119 2604 101 13 16 chr20 54080212 54080588 -18073294 - THE1C LTR MaLR 0 375 1 203 233 147 52 chr20 54080588 54080673 -18073209 + MIR SINE MIR 143 243 -19 338 283 40 46 chr20 54081226 54081399 -18072483 - MIR3 SINE MIR -21 187 16 1520 241 42 69 chr20 54081403 54081927 -18071955 + Charlie8 DNA MER1_type 1 510 -1907 194 260 8 0 chr20 54082207 54082334 -18071548 + (TG)n Simple_repeat Simple_repeat 1 128 0 272 273 13 0 chr20 54083041 54083118 -18070764 + L2 LINE L2 3176 3253 -19 389 260 79 11 chr20 54083157 54083290 -18070592 - MIR SINE MIR -62 146 9 3114 130 4 23 chr20 54083382 54083865 -18070017 - Tigger1 DNA MER2_type 0 2418 1945 2204 68 20 7 chr20 54083865 54084157 -18069725 + AluY SINE Alu 1 296 -15 1708 147 11 4 chr20 54084155 54084428 -18069454 - AluSx SINE Alu -37 275 1 * 11546 120 22 5 chr20 54084428 54086117 -18067765 - Tigger1 DNA MER2_type -701 1717 1 408 155 0 0 chr20 54086117 54086175 -18067707 + Tigger1 DNA MER2_type 2361 2418 0 1287 280 88 10 chr20 54087305 54087712 -18066170 + MLT1K LTR MaLR 125 563 -25 1790 257 88 69 chr20 54088324 54088907 -18064975 + L1MC4 LINE L1 6978 7589 -453 2043 114 10 0 chr20 54088907 54089205 -18064677 + AluSx SINE Alu 1 301 -11 1790 257 88 69 chr20 54089205 54089621 -18064261 + L1MC4 LINE L1 7589 7996 -46 510 225 151 93 chr20 54089731 54090095 -18063787 - MER113 DNA MER1_type? -125 396 12 2493 52 0 0 chr20 54090210 54090515 -18063367 + AluY SINE Alu 1 305 -6 1724 193 102 19 chr20 54090674 54091105 -18062777 - MLT1C LTR MaLR 0 467 1 1724 294 94 28 chr20 54091134 54092003 -18061879 + L1MC4a LINE L1 5122 5298 -848 2055 163 82 88 chr20 54092003 54092524 -18061358 - MLT2B1 LTR ERVL -2 518 1 1724 294 94 28 chr20 54092524 54092638 -18061244 + L1MC4a LINE L1 5298 5403 -743 2383 105 33 30 chr20 54093226 54093589 -18060293 - THE1B LTR MaLR 0 364 1 437 278 42 21 chr20 54093591 54093735 -18060147 + MIR SINE MIR 64 210 -52 816 267 52 36 chr20 54093791 54094042 -18059840 - MIR SINE MIR 0 262 8 724 292 77 9 chr20 54094207 54094440 -18059442 - MIR SINE MIR 0 262 14 234 91 0 0 chr20 54094974 54095007 -18058875 + (A)n Simple_repeat Simple_repeat 1 33 0 192 378 10 10 chr20 54095314 54095412 -18058470 + L3 LINE CR1 1377 1474 -103 682 162 120 0 chr20 54095546 54095663 -18058219 + FLAM_C SINE Alu 1 131 -2 230 240 20 0 chr20 54095779 54095829 -18058053 + L3 LINE CR1 1525 1575 -2 379 240 40 0 chr20 54095882 54095982 -18057900 + HAL1 LINE L1 2288 2391 -116 276 197 98 0 chr20 54096171 54096232 -18057650 - MIR3 SINE MIR -46 162 96 283 292 45 22 chr20 54096621 54096710 -18057172 - MIR SINE MIR -22 240 150 429 210 12 0 chr20 54096819 54096900 -18056982 - MER20 DNA MER1_type -137 82 1 246 283 163 0 chr20 54096911 54097003 -18056879 - MIR SINE MIR -48 214 108 198 0 0 0 chr20 54097187 54097209 -18056673 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 750 200 65 21 chr20 54097238 54097442 -18056440 + MIR SINE MIR 52 262 0 282 318 109 55 chr20 54098187 54098246 -18055636 + MIR SINE MIR 20 74 -188 1754 125 52 75 chr20 54098246 54098422 -18055460 + THE1C LTR MaLR 1 180 -195 1973 118 3 10 chr20 54098422 54098726 -18055156 + AluSx SINE Alu 1 302 -10 1754 125 52 75 chr20 54098726 54098933 -18054949 + THE1C LTR MaLR 180 375 0 282 318 109 55 chr20 54098933 54099093 -18054789 + MIR SINE MIR 74 251 -11 604 296 51 16 chr20 54099300 54099645 -18054237 - REP3 LTR ERV -133 429 26 343 180 0 0 chr20 54099683 54099744 -18054138 + L2 LINE L2 3253 3313 0 951 260 62 61 chr20 54099949 54100479 -18053403 - MLT1K LTR MaLR 0 588 2 208 218 0 39 chr20 54100545 54100623 -18053259 - L2 LINE L2 -281 2991 2917 273 119 0 0 chr20 54100758 54100800 -18053082 - L2 LINE L2 0 3313 3272 544 250 206 11 chr20 54101109 54101289 -18052593 + MIR SINE MIR 46 260 -2 787 214 31 46 chr20 54101398 54101594 -18052288 + MIR SINE MIR 70 262 0 24 67 0 0 chr20 54101626 54101671 -18052211 + AT_rich Low_complexity Low_complexity 1 45 0 1326 179 0 25 chr20 54101715 54101955 -18051927 + MER46A DNA MER2_type 2 235 -1 1890 143 3 0 chr20 54102011 54102304 -18051578 + AluSx SINE Alu 1 294 -18 769 234 127 0 chr20 54103104 54103301 -18050581 + MIR SINE MIR 41 262 0 322 195 24 24 chr20 54103646 54103728 -18050154 - L2 LINE L2 0 3313 3232 868 243 64 23 chr20 54103733 54103951 -18049931 - MIR SINE MIR -16 246 20 704 251 90 36 chr20 54103968 54104168 -18049714 - L1MC4 LINE L1 0 8042 7815 1540 192 124 74 chr20 54104168 54104684 -18049198 - MLT1F LTR MaLR 0 542 1 704 251 90 36 chr20 54104684 54104817 -18049065 - L1MC4 LINE L1 -227 7815 7691 1728 270 14 76 chr20 54104828 54105421 -18048461 + MLT1K LTR MaLR 33 588 0 676 241 52 21 chr20 54105626 54105817 -18048065 + MIR SINE MIR 52 248 -14 709 246 34 56 chr20 54106041 54106309 -18047573 - MIR SINE MIR 0 262 1 300 301 138 0 chr20 54106997 54107120 -18046762 + MIR SINE MIR 53 192 -70 532 333 29 5 chr20 54107141 54107348 -18046534 + MIR SINE MIR 4 215 -47 646 253 22 34 chr20 54107392 54107570 -18046312 + MIR SINE MIR 63 238 -24 1764 172 10 3 chr20 54107575 54107878 -18046004 - AluJo SINE Alu -7 305 1 216 0 0 0 chr20 54108009 54108033 -18045849 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 1251 167 0 0 chr20 54108037 54108235 -18045647 - AluJo SINE Alu -20 292 95 340 200 106 55 chr20 54108417 54108564 -18045318 + MIR SINE MIR 20 171 -62 1992 103 7 0 chr20 54108576 54108887 -18044995 - AluSx SINE Alu 0 313 1 951 171 14 95 chr20 54108913 54109135 -18044747 + MER20 DNA MER1_type 1 204 -15 207 254 169 0 chr20 54109230 54109301 -18044581 + MIR SINE MIR 117 199 -63 231 208 0 21 chr20 54109717 54109765 -18044117 + CT-rich Low_complexity Low_complexity 1 47 0 363 345 35 0 chr20 54110360 54110502 -18043380 + MIR SINE MIR 109 255 -7 1805 121 0 40 chr20 54110653 54110950 -18042932 + AluJb SINE Alu 11 295 -17 690 212 15 0 chr20 54110994 54111131 -18042751 + MIR SINE MIR 103 241 -21 907 199 147 0 chr20 54112400 54112591 -18041291 - MER58A DNA MER1_type 0 224 6 193 295 158 95 chr20 54112650 54112734 -18041148 - L3b LINE CR1 -203 1380 1303 1189 189 14 0 chr20 54112734 54112951 -18040931 + MER58A DNA MER1_type 4 223 -1 193 295 158 95 chr20 54112951 54113107 -18040775 - L3b LINE CR1 -280 1303 1125 304 222 62 0 chr20 54113255 54113336 -18040546 + MER112 DNA MER1_type 68 153 -107 606 263 33 9 chr20 54113340 54113655 -18040227 - MLT1I LTR MaLR -3 406 1 1774 171 23 0 chr20 54113656 54113961 -18039921 + AluJo SINE Alu 1 312 0 1265 204 0 0 chr20 54113998 54114219 -18039663 - MER58A DNA MER1_type 0 224 4 351 239 43 11 chr20 54114222 54114314 -18039568 + MER112 DNA MER1_type 154 248 -12 245 293 160 0 chr20 54114314 54114420 -18039462 + L2 LINE L2 3145 3267 -5 580 297 51 5 chr20 54114767 54114962 -18038920 - MIR SINE MIR -58 204 1 504 234 82 56 chr20 54115220 54115451 -18038431 - MLT1K LTR MaLR -6 582 346 290 139 0 0 chr20 54115477 54115520 -18038362 + L2 LINE L2 3270 3312 -1 352 271 98 38 chr20 54115605 54115738 -18038144 + MIR SINE MIR 4 144 -118 * 398 314 83 0 chr20 54115718 54115874 -18038008 - MIR SINE MIR -85 177 9 307 225 0 28 chr20 54115851 54115922 -18037960 + L2 LINE L2 3183 3251 -21 * 379 244 98 55 chr20 54116042 54116206 -18037676 + MIR3 SINE MIR 37 207 -1 938 288 42 2 chr20 54116588 54116971 -18036911 - LTR16C LTR ERVL 0 491 2 246 349 54 0 chr20 54117142 54117308 -18036574 + LTR67 LTR ERVL 382 556 -1 404 298 30 15 chr20 54117434 54117565 -18036317 + MIR3 SINE MIR 5 137 -71 271 190 52 17 chr20 54117614 54117672 -18036210 + MIR SINE MIR 92 151 -111 489 294 145 41 chr20 54117773 54118222 -18035660 - L2 LINE L2 -10 3303 2759 289 167 37 0 chr20 54118300 54118354 -18035528 - L2 LINE L2 0 3313 3258 423 305 86 0 chr20 54118960 54119111 -18034771 - MIR SINE MIR -1 261 98 859 186 64 0 chr20 54119394 54119566 -18034316 - MER20 DNA MER1_type -34 185 3 787 308 148 25 chr20 54119690 54120179 -18033703 + L2 LINE L2 2715 3271 -1 1186 58 32 0 chr20 54120960 54121114 -18032768 - AluSp SINE Alu -15 298 140 195 161 0 0 chr20 54121136 54121167 -18032715 - L2 LINE L2 -18 3295 3265 1307 196 0 4 chr20 54121655 54121880 -18032002 - MER58A DNA MER1_type 0 224 1 248 292 15 31 chr20 54122012 54122142 -18031740 - L1MC/D LINE L1 -1898 5910 5783 1182 252 91 17 chr20 54122150 54122566 -18031316 - MLT1J2 LTR MaLR 0 450 4 1979 88 164 16 chr20 54122566 54122883 -18030999 - THE1B LTR MaLR 0 364 1 337 225 0 0 chr20 54122891 54122962 -18030920 + MIR SINE MIR 180 250 -12 1812 215 74 9 chr20 54123159 54123351 -18030531 + MLT1D LTR MaLR 7 185 -320 441 0 0 0 chr20 54123351 54123400 -18030482 + (CA)n Simple_repeat Simple_repeat 1 49 0 1812 215 74 9 chr20 54123400 54123668 -18030214 + MLT1D LTR MaLR 185 497 -8 4000 96 28 2 chr20 54124373 54124946 -18028936 - L1PA13 LINE L1 -3 6160 5573 723 152 146 41 chr20 54125110 54125281 -18028601 - MER20 DNA MER1_type 0 219 31 204 254 0 0 chr20 54125436 54125495 -18028387 + (CACG)n Simple_repeat Simple_repeat 1 59 0 691 234 77 34 chr20 54125975 54126184 -18027698 - MIR SINE MIR -13 249 32 643 283 11 37 chr20 54126188 54126379 -18027503 - MIR SINE MIR 0 262 77 938 218 58 10 chr20 54126427 54126633 -18027249 + MER58A DNA MER1_type 9 224 0 4890 119 37 23 chr20 54126850 54126874 -18027008 + L1MA5 LINE L1 5468 5490 -810 1987 112 30 26 chr20 54126874 54127198 -18026684 + AluSx SINE Alu 1 312 0 4890 119 37 23 chr20 54127198 54127841 -18026041 + L1MA5 LINE L1 5490 6150 -150 1844 156 10 0 chr20 54127841 54128148 -18025734 - AluJo SINE Alu -2 310 1 4890 119 37 23 chr20 54128148 54128297 -18025585 + L1MA5 LINE L1 6150 6296 -4 309 256 15 68 chr20 54128386 54128519 -18025363 + L2 LINE L2 2967 3092 -180 1718 232 29 53 chr20 54128585 54129077 -18024805 + LTR16C LTR ERVL 1 480 -11 695 227 72 10 chr20 54129177 54129371 -18024511 - L2 LINE L2 -2 3311 3106 461 225 23 78 chr20 54129403 54129532 -18024350 - MER5B DNA MER1_type -36 142 21 183 322 251 6 chr20 54129579 54129750 -18024132 - L2 LINE L2 -267 3046 2834 802 270 70 4 chr20 54129796 54130026 -18023856 - MER112 DNA MER1_type -15 245 1 292 290 49 33 chr20 54130027 54130210 -18023672 - L2 LINE L2 -514 2800 2615 832 239 47 14 chr20 54130432 54130645 -18023237 - MIR SINE MIR -18 244 25 200 133 133 0 chr20 54130870 54130915 -18022967 + MIR SINE MIR 26 76 -186 188 261 14 43 chr20 54131034 54131103 -18022779 - MIR SINE MIR -165 97 31 743 211 64 0 chr20 54131951 54132107 -18021775 - FRAM SINE Alu 0 166 1 414 264 27 9 chr20 54132120 54132230 -18021652 - L2 LINE L2 0 3313 3202 1001 169 84 97 chr20 54132246 54132348 -18021534 - MER33 DNA MER1_type -2261 324 222 2197 74 0 23 chr20 54132348 54132647 -18021235 + AluY SINE Alu 1 292 -19 1001 169 84 97 chr20 54132647 54132802 -18021080 - MER33 DNA MER1_type -2363 222 69 1852 146 0 28 chr20 54132802 54133123 -18020759 - AluSx SINE Alu 0 312 1 1001 169 84 97 chr20 54133123 54133184 -18020698 - MER33 DNA MER1_type -2516 69 9 393 264 150 57 chr20 54133321 54133548 -18020334 - L2 LINE L2 -219 3053 2806 464 254 71 0 chr20 54134145 54134271 -18019611 - MIR SINE MIR 0 262 128 1059 167 57 5 chr20 54134410 54134602 -18019280 - MER20 DNA MER1_type -3 216 15 573 244 52 35 chr20 54134653 54134825 -18019057 + MIR SINE MIR 67 241 -21 918 162 60 0 chr20 54135041 54135208 -18018674 - AluSg/x SINE Alu -4 308 132 255 238 32 0 chr20 54135209 54135272 -18018610 + L2 LINE L2 3249 3313 0 265 297 5 10 chr20 54135313 54135439 -18018443 + T-rich Low_complexity Low_complexity 1 125 0 449 275 3 70 chr20 54136139 54136160 -18017722 + L1MC4a LINE L1 5667 5688 -433 1053 181 52 14 chr20 54136160 54136370 -18017512 + MER20 DNA MER1_type 2 219 0 449 275 3 70 chr20 54136370 54136581 -18017301 + L1MC4a LINE L1 5688 5882 -239 550 242 89 45 chr20 54136622 54136891 -18016991 + L1MC5 LINE L1 7633 7913 -48 300 53 0 0 chr20 54136902 54136940 -18016942 + (CA)n Simple_repeat Simple_repeat 2 39 0 1580 236 108 16 chr20 54137009 54137462 -18016420 - MLT1J LTR MaLR -15 496 2 556 318 165 46 chr20 54137673 54138104 -18015778 - L2 LINE L2 -4 3309 2828 358 280 35 19 chr20 54138273 54138394 -18015488 + MIR SINE MIR 44 168 -69 * 760 273 62 9 chr20 54138378 54138605 -18015277 - MIR SINE MIR -20 242 4 550 296 106 47 chr20 54138996 54139574 -18014308 + L1MC5 LINE L1 7314 7925 -36 573 263 106 17 chr20 54139801 54140036 -18013846 + MIR SINE MIR 8 262 0 1230 185 32 22 chr20 54140797 54141208 -18012674 + L1MD2 LINE L1 5880 6347 -12 878 147 0 0 chr20 54141209 54141338 -18012544 + FLAM_C SINE Alu 1 129 -4 1592 99 0 0 chr20 54141454 54141667 -18012215 + AluSx SINE Alu 1 213 -99 1184 154 5 41 chr20 54141900 54142120 -18011762 + AluJo SINE Alu 1 212 -100 2331 72 0 0 chr20 54142212 54142504 -18011378 - AluY SINE Alu -17 294 3 325 266 8 39 chr20 54142772 54142900 -18010982 + L1MC4a LINE L1 5759 5882 -1926 377 298 10 0 chr20 54143249 54143353 -18010529 + L2 LINE L2 3143 3247 -25 481 244 170 30 chr20 54143858 54144088 -18009794 - MLT1K LTR MaLR -233 355 94 641 266 254 22 chr20 54144262 54144706 -18009176 - L2 LINE L2 -337 2977 2431 590 218 98 0 chr20 54145692 54145825 -18008057 - MIR SINE MIR -67 195 50 439 238 346 0 chr20 54145928 54146113 -18007769 + MIR SINE MIR 14 262 0 3081 133 28 9 chr20 54146291 54146834 -18007048 - L1MA4 LINE L1 0 6300 5748 271 256 44 22 chr20 54146991 54147081 -18006801 + MIR SINE MIR 159 250 -12 388 229 83 0 chr20 54147465 54147561 -18006321 - L1MCa LINE L1 -3692 2734 2631 352 280 48 2 chr20 54147567 54147733 -18006149 - L1MCa LINE L1 -3841 2604 2421 302 273 41 50 chr20 54147761 54147882 -18006000 - L1MCa LINE L1 -4182 2244 2125 633 293 130 43 chr20 54147967 54148592 -18005290 - L1MCa LINE L1 -4550 1876 996 2178 116 3 0 chr20 54148592 54148894 -18004988 - AluSq SINE Alu -10 303 1 633 293 130 43 chr20 54148894 54149095 -18004787 - L1MCa LINE L1 -5430 996 814 770 265 45 73 chr20 54150067 54150715 -18003167 + L1M3 LINE L1 5156 5772 -406 247 208 0 38 chr20 54151015 54151068 -18002814 + polypyrimidine Low_complexity Low_complexity 2 52 0 970 216 52 79 chr20 54151409 54151700 -18002182 - MER102a DNA MER1_type -6 324 42 484 101 69 9 chr20 54152088 54152306 -18001576 + (TA)n Simple_repeat Simple_repeat 1 231 0 2207 171 54 12 chr20 54152346 54152755 -18001127 - MSTB LTR MaLR 0 426 1 1591 192 39 18 chr20 54152921 54153255 -18000627 - MER58B DNA MER1_type 0 341 1 245 250 19 0 chr20 54153411 54153463 -18000419 - MER2 DNA MER2_type -19 326 274 1947 120 0 0 chr20 54153472 54153738 -18000144 + AluSx SINE Alu 7 272 -40 441 0 0 0 chr20 54153738 54153787 -18000095 + (TC)n Simple_repeat Simple_repeat 2 50 0 297 0 0 0 chr20 54153786 54153819 -18000063 + (TA)n Simple_repeat Simple_repeat 1 33 0 * 1161 162 5 59 chr20 54153861 54154083 -17999799 - MER2 DNA MER2_type -135 210 1 285 318 93 31 chr20 54154175 54154304 -17999578 - MIR SINE MIR -119 143 7 1744 153 0 14 chr20 54154533 54154827 -17999055 - AluJb SINE Alu -22 290 1 2179 85 0 10 chr20 54155094 54155388 -17998494 - AluSc SINE Alu -18 291 1 591 290 48 29 chr20 54157094 54157301 -17996581 + MIR SINE MIR 41 251 -11 611 235 65 78 chr20 54157357 54157509 -17996373 + MER102a DNA MER1_type 5 155 -186 2271 90 0 3 chr20 54157509 54157808 -17996074 + AluSg SINE Alu 1 298 -12 611 235 65 78 chr20 54157808 54157885 -17995997 + MER102a DNA MER1_type 155 231 -110 190 180 98 33 chr20 54157927 54157988 -17995894 - MIR SINE MIR -19 243 179 908 237 65 0 chr20 54158047 54158233 -17995649 - MIR SINE MIR -64 198 1 485 230 223 7 chr20 54158235 54158383 -17995499 - MIR SINE MIR -70 192 13 570 259 37 55 chr20 54158861 54159061 -17994821 + MIR SINE MIR 20 214 -48 444 283 130 6 chr20 54159077 54159335 -17994547 + L2 LINE L2 2766 3054 -259 1050 279 73 31 chr20 54159370 54159753 -17994129 - L2 LINE L2 0 3313 2915 200 220 20 20 chr20 54159833 54159883 -17993999 + L2 LINE L2 3263 3312 -1 324 345 21 37 chr20 54159939 54160130 -17993752 + MIR SINE MIR 75 262 0 271 238 57 33 chr20 54160675 54160720 -17993162 + MER113 DNA MER1_type? 44 86 -435 2214 103 0 0 chr20 54160720 54161022 -17992860 - AluSq SINE Alu -11 302 1 271 238 57 33 chr20 54161022 54161098 -17992784 + MER113 DNA MER1_type? 86 168 -353 201 244 111 56 chr20 54161254 54161344 -17992538 - MIR SINE MIR -95 113 19 347 346 23 31 chr20 54161740 54161870 -17992012 - MIR SINE MIR -62 146 18 190 289 0 0 chr20 54161909 54161954 -17991928 + L2 LINE L2 3269 3313 0 290 191 0 17 chr20 54162230 54162336 -17991546 + MER5A DNA MER1_type 7 164 -25 216 239 0 120 chr20 54162400 54162492 -17991390 + L2 LINE L2 3158 3238 -75 1303 108 108 9 chr20 54162492 54162704 -17991178 - MSTA LTR MaLR 0 428 196 229 156 0 0 chr20 54162691 54162736 -17991146 + Alu SINE Alu 258 302 -1 * 491 126 71 118 chr20 54163044 54163171 -17990711 - MSTA LTR MaLR -262 166 46 208 250 0 0 chr20 54165203 54165247 -17988635 - MIR SINE MIR -6 256 213 681 302 29 16 chr20 54165557 54165799 -17988083 + MIR SINE MIR 18 262 0 1000 245 32 4 chr20 54165823 54166072 -17987810 + MIR SINE MIR 5 260 -2 445 291 33 6 chr20 54166072 54166234 -17987648 - MIR SINE MIR -62 146 33 266 331 113 16 chr20 54166649 54166773 -17987109 - MLT1K LTR MaLR -435 153 18 279 278 136 45 chr20 54166857 54167012 -17986870 + MIR3 SINE MIR 34 208 0 630 296 86 9 chr20 54167354 54167587 -17986295 + MIR SINE MIR 12 262 0 262 231 15 15 chr20 54167587 54167652 -17986230 + CT-rich Low_complexity Low_complexity 2 66 0 202 70 0 70 chr20 54167701 54167744 -17986138 + (TTTCC)n Simple_repeat Simple_repeat 2 41 0 1025 100 14 0 chr20 54167757 54167897 -17985985 - AluSg/x SINE Alu -16 293 152 354 239 34 26 chr20 54167915 54168019 -17985863 + CT-rich Low_complexity Low_complexity 3 110 -10 3499 105 10 2 chr20 54168019 54168506 -17985376 - L1PA10 LINE L1 -1 6167 5677 354 239 34 26 chr20 54168506 54168518 -17985364 + CT-rich Low_complexity Low_complexity 110 120 0 184 333 75 54 chr20 54168540 54168633 -17985249 - L2 LINE L2 -39 3233 3139 698 237 96 46 chr20 54168962 54169181 -17984701 + MIR SINE MIR 4 233 -29 450 320 81 40 chr20 54169608 54169830 -17984052 + MIR SINE MIR 6 236 -26 377 188 12 24 chr20 54169942 54170027 -17983855 - LTR67 LTR ERVL -12 545 462 230 267 0 0 chr20 54170103 54170163 -17983719 - MLT1K LTR MaLR -325 263 204 1132 241 90 52 chr20 54170231 54170655 -17983227 - MLT1J2 LTR MaLR -6 444 5 894 312 77 13 chr20 54171082 54171457 -17982425 - MLT1K LTR MaLR -8 580 182 232 250 0 76 chr20 54171488 54171580 -17982302 - MLT1K LTR MaLR -494 94 10 1147 276 160 5 chr20 54171712 54172157 -17981725 - MLT1K LTR MaLR -4 584 71 239 121 0 0 chr20 54172283 54172322 -17981560 + MIR SINE MIR 103 142 -66 267 31 0 0 chr20 54172439 54172471 -17981411 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 232 338 14 0 chr20 54172472 54172546 -17981336 - L2 LINE L2 -47 3225 3151 390 270 0 0 chr20 54172639 54172728 -17981154 + MER102a DNA MER1_type 242 330 0 1544 191 7 7 chr20 54172749 54173052 -17980830 - AluJb SINE Alu -9 303 1 538 299 155 46 chr20 54173207 54173429 -17980453 - L2 LINE L2 -341 2973 2777 1581 166 0 38 chr20 54173429 54173749 -17980133 - AluJo SINE Alu -4 308 1 538 299 155 46 chr20 54173749 54173958 -17979924 - L2 LINE L2 -537 2777 2495 863 245 5 0 chr20 54174008 54174200 -17979682 - MIR SINE MIR -56 206 14 524 344 11 16 chr20 54174504 54174693 -17979189 + MIR SINE MIR 5 192 -70 1184 201 10 0 chr20 54174704 54174908 -17978974 - MER58A DNA MER1_type 0 224 19 252 143 0 0 chr20 54174995 54175037 -17978845 + (CA)n Simple_repeat Simple_repeat 1 42 0 1161 212 9 0 chr20 54175445 54175662 -17978220 - MER58A DNA MER1_type -1 223 5 815 277 109 20 chr20 54175669 54176019 -17977863 - L1ME3A LINE L1 -215 5955 5575 334 223 126 0 chr20 54176019 54176163 -17977719 - MLT1H LTR MaLR -2 593 377 1011 142 19 0 chr20 54176298 54176460 -17977422 + AluJb SINE Alu 128 292 -20 218 194 16 0 chr20 54176480 54176542 -17977340 + (TA)n Simple_repeat Simple_repeat 2 64 0 2006 134 0 3 chr20 54176611 54176910 -17976972 - AluSx SINE Alu -14 298 1 240 287 0 46 chr20 54177011 54177098 -17976784 - MIR3 SINE MIR -48 160 78 928 219 32 86 chr20 54177182 54177642 -17976240 + L2 LINE L2 2692 3134 -179 245 250 220 45 chr20 54177823 54177955 -17975927 + L2 LINE L2 3159 3313 0 647 188 216 78 chr20 54178196 54178312 -17975570 - MER5C DNA MER1_type 0 324 225 2004 142 0 0 chr20 54178312 54178615 -17975267 - AluSx SINE Alu -9 303 1 647 188 216 78 chr20 54178615 54178780 -17975102 - MER5C DNA MER1_type -99 225 4 462 313 187 14 chr20 54178919 54179213 -17974669 - L2 LINE L2 -2 3270 2926 290 256 26 0 chr20 54179339 54179431 -17974451 + L1ME4a LINE L1 5695 5788 -571 297 267 78 17 chr20 54179475 54179591 -17974291 - L2 LINE L2 -431 2883 2761 257 264 0 28 chr20 54179823 54179895 -17973987 + MIR SINE MIR 119 188 -74 238 283 65 72 chr20 54179963 54180101 -17973781 - MIR SINE MIR -55 153 17 584 269 68 34 chr20 54180192 54180450 -17973432 + L1MC4a LINE L1 5408 5675 -2128 383 0 21 0 chr20 54180450 54180497 -17973385 + (TG)n Simple_repeat Simple_repeat 1 48 0 316 236 38 19 chr20 54180517 54180623 -17973259 + (TATATG)n Simple_repeat Simple_repeat 4 111 0 340 328 21 38 chr20 54180624 54180859 -17973023 + L1MC4a LINE L1 5694 5924 -1884 310 240 29 118 chr20 54180885 54181089 -17972793 + L1ME4a LINE L1 5934 6119 -2 235 260 0 0 chr20 54181504 54181554 -17972328 - Charlie8 DNA MER1_type -1997 420 371 481 320 46 15 chr20 54181688 54181885 -17971997 - Charlie8 DNA MER1_type -2213 204 2 1078 272 61 46 chr20 54182184 54182737 -17971145 - L2 LINE L2 0 3313 2753 554 202 128 0 chr20 54183142 54183251 -17970631 - FLAM_A SINE Alu -10 123 1 24 0 0 0 chr20 54183305 54183329 -17970553 + AT_rich Low_complexity Low_complexity 1 24 0 427 298 113 13 chr20 54183501 54183652 -17970230 - MIR SINE MIR -6 256 91 225 0 0 0 chr20 54184119 54184144 -17969738 + (TTCA)n Simple_repeat Simple_repeat 2 26 0 342 267 192 49 chr20 54184148 54184492 -17969390 - L2 LINE L2 -22 3291 2899 528 287 13 13 chr20 54184551 54184701 -17969181 - MIR SINE MIR -79 183 34 529 250 47 52 chr20 54184742 54184965 -17968917 - MIR SINE MIR -36 226 1 1604 158 3 21 chr20 54185525 54185809 -17968073 + AluJb SINE Alu 21 299 -13 1107 138 0 0 chr20 54185810 54185970 -17967912 + AluJo/FRAM SINE Alu 137 296 -16 313 241 54 45 chr20 54186011 54186123 -17967759 - MIR SINE MIR -58 150 38 359 273 82 27 chr20 54186463 54186646 -17967236 + MIR SINE MIR 10 202 -60 857 243 51 47 chr20 54186709 54186964 -17966918 + MIR SINE MIR 7 262 0 2240 113 0 0 chr20 54187166 54187476 -17966406 + AluSx SINE Alu 1 310 -2 229 209 0 104 chr20 54187715 54187782 -17966100 + MIR SINE MIR 66 104 -104 399 273 23 8 chr20 54187845 54187977 -17965905 + MER103 DNA DNA 12 145 -21 2086 126 0 0 chr20 54188141 54188435 -17965447 - AluSx SINE Alu -18 294 1 1369 115 18 9 chr20 54188477 54188694 -17965188 - AluJb SINE Alu -10 302 84 842 151 20 7 chr20 54188694 54188846 -17965036 - L1MB7 LINE L1 -43 6141 5988 403 282 23 0 chr20 54189154 54189320 -17964562 - L1MEc LINE L1 -4935 1461 1132 4339 210 68 17 chr20 54189343 54189454 -17964428 - L1MEc LINE L1 -5268 1128 1024 1978 136 10 0 chr20 54189454 54189756 -17964126 - AluSx SINE Alu -7 305 1 4339 210 68 17 chr20 54189756 54190683 -17963199 - L1MEc LINE L1 -5372 1024 37 1809 266 28 26 chr20 54191227 54191799 -17962083 - L1MC4a LINE L1 -1891 5917 5345 475 330 85 16 chr20 54191818 54192252 -17961630 + L1M4 LINE L1 4686 5149 -997 327 210 7 119 chr20 54192278 54192421 -17961461 + L1M4 LINE L1 3093 3219 -2927 498 288 31 101 chr20 54192471 54192798 -17961084 - MER102a DNA MER1_type -3 327 24 944 150 25 6 chr20 54193529 54193689 -17960193 + MER3 DNA MER1_type 1 163 -46 1547 182 27 95 chr20 54193749 54194150 -17959732 + MLT1A2 LTR MaLR 1 374 0 569 237 15 15 chr20 54194345 54194476 -17959406 - L2 LINE L2 -6 3266 3136 550 268 105 68 chr20 54194593 54194918 -17958964 - MER102b DNA MER1_type -4 337 1 1079 168 15 15 chr20 54195742 54195939 -17957943 - MER58A DNA MER1_type 0 224 28 831 191 143 26 chr20 54195949 54196179 -17957703 - MER20B DNA MER1_type -526 257 1 310 323 54 15 chr20 54196241 54196371 -17957511 - L2 LINE L2 -2 3270 3136 704 220 95 0 chr20 54196391 54196559 -17957323 - MLT1B LTR MaLR -18 372 189 866 154 7 14 chr20 54196588 54196731 -17957151 - FRAM SINE Alu -23 153 12 579 194 118 7 chr20 54196739 54196883 -17956999 - MLT1B LTR MaLR -221 169 10 230 252 106 32 chr20 54197149 54197272 -17956610 - L2 LINE L2 -558 2756 2625 250 152 359 11 chr20 54198494 54198586 -17955296 + MIR SINE MIR 37 160 -102 999 208 60 0 chr20 54199125 54199308 -17954574 - MER58A DNA MER1_type -30 194 1 642 303 112 34 chr20 54199409 54199732 -17954150 + MLT1I LTR MaLR 59 406 -3 1393 227 36 36 chr20 54199736 54200124 -17953758 - MER113 DNA MER1_type? -35 486 99 2080 186 79 9 chr20 54200501 54200931 -17952951 - MLT1C LTR MaLR -7 460 1 1579 173 27 10 chr20 54201555 54201850 -17952032 + AluJb SINE Alu 1 300 -12 242 309 161 12 chr20 54201863 54202025 -17951857 - MIR SINE MIR -19 243 58 710 200 46 23 chr20 54202025 54202200 -17951682 + MER96B DNA MER1_type? 1 179 -238 243 139 0 0 chr20 54202442 54202478 -17951404 + MER96B DNA MER1_type? 190 225 -192 716 308 23 42 chr20 54202600 54202743 -17951139 + MIR SINE MIR 8 145 -117 2253 127 13 44 chr20 54202743 54203130 -17950752 - THE1C LTR MaLR 0 375 1 716 308 23 42 chr20 54203130 54203246 -17950636 + MIR SINE MIR 145 262 0 1749 174 92 62 chr20 54203277 54203765 -17950117 - MLT1D LTR MaLR -2 503 1 463 258 109 70 chr20 54203769 54204025 -17949857 - L2 LINE L2 -1 3312 3047 1886 140 31 0 chr20 54204039 54204325 -17949557 + AluJo SINE Alu 1 295 -17 1193 178 33 4 chr20 54204446 54204687 -17949195 - L1MB2 LINE L1 -26 6145 5898 207 100 0 0 chr20 54204933 54204963 -17948919 + (CA)n Simple_repeat Simple_repeat 1 30 0 286 228 39 111 chr20 54204973 54205001 -17948881 + MER112 DNA MER1_type 3 31 -229 1748 188 12 12 chr20 54205001 54205342 -17948540 + MER58B DNA MER1_type 1 341 0 286 228 39 111 chr20 54205342 54205493 -17948389 + MER112 DNA MER1_type 31 169 -91 530 256 183 50 chr20 54205512 54205657 -17948225 + MIR SINE MIR 12 197 -65 2460 66 0 0 chr20 54205657 54205961 -17947921 - AluSx SINE Alu -7 305 2 530 256 183 50 chr20 54205961 54206034 -17947848 + MIR SINE MIR 197 259 -3 249 326 47 16 chr20 54206190 54206319 -17947563 + MIR SINE MIR 60 192 -70 371 276 98 8 chr20 54206492 54206615 -17947267 - MIR SINE MIR -126 136 3 311 210 0 0 chr20 54207483 54207545 -17946337 + MER117 DNA MER1_type 98 159 -38 553 216 63 21 chr20 54207623 54207813 -17946069 + MER113 DNA MER1_type? 46 243 -278 822 294 0 0 chr20 54207957 54208161 -17945721 - MIR SINE MIR -57 205 2 398 313 67 22 chr20 54208261 54208395 -17945487 + MIR3 SINE MIR 17 156 -52 573 247 129 43 chr20 54208508 54208833 -17945049 - MLT1J LTR MaLR -157 458 25 915 219 6 0 chr20 54209410 54209588 -17944294 + MIR SINE MIR 67 245 -17 533 188 54 18 chr20 54209945 54210057 -17943825 + MER91B DNA MER1_type 36 151 -39 597 296 77 49 chr20 54210131 54210418 -17943464 - L2 LINE L2 0 3313 3019 240 186 0 0 chr20 54210468 54210511 -17943371 - L2 LINE L2 0 3272 3230 * 580 292 113 0 chr20 54210484 54210669 -17943213 - MIR SINE MIR -10 252 47 1102 259 150 76 chr20 54210855 54211360 -17942522 - MLT1H LTR MaLR 0 549 1 266 247 32 11 chr20 54211603 54211696 -17942186 - MLT1J LTR MaLR -7 504 410 1932 167 11 47 chr20 54211794 54212153 -17941729 - MLT1A1 LTR MaLR -1 364 19 275 280 75 21 chr20 54212137 54212230 -17941652 - MLT1J LTR MaLR -412 99 2 * 376 289 31 39 chr20 54212704 54212832 -17941050 + MIR SINE MIR 62 188 -74 240 310 35 17 chr20 54212958 54213074 -17940808 + L2 LINE L2 3155 3272 0 319 237 0 0 chr20 54213101 54213177 -17940705 - Charlie8 DNA MER1_type -1 2416 2341 2236 113 0 0 chr20 54213199 54213508 -17940374 - AluSx SINE Alu -3 309 1 1725 177 153 33 chr20 54213539 54213990 -17939892 - MLT1D LTR MaLR 0 505 1 524 262 71 48 chr20 54214078 54214277 -17939605 - Charlie8 DNA MER1_type -65 265 59 1999 130 0 7 chr20 54214277 54214578 -17939304 + AluSg SINE Alu 1 299 -11 792 256 39 24 chr20 54214735 54214942 -17938940 - MIR SINE MIR -11 251 42 2116 217 19 39 chr20 54214960 54215200 -17938682 - L1MD3 LINE L1 -10 7985 7742 2179 122 70 75 chr20 54215200 54215628 -17938254 + MSTB LTR MaLR 1 426 0 2116 217 19 39 chr20 54215628 54215922 -17937960 - L1MD3 LINE L1 -253 7742 7462 217 318 0 28 chr20 54216311 54216418 -17937464 - L2 LINE L2 -1102 2212 2109 270 248 58 74 chr20 54217274 54217395 -17936487 + MIR SINE MIR 16 134 -128 * 398 308 227 8 chr20 54217385 54217645 -17936237 + L2 LINE L2 2996 3312 -1 194 267 0 0 chr20 54217709 54217754 -17936128 + L2 LINE L2 3207 3251 -21 310 268 98 0 chr20 54217786 54217868 -17936014 - L2 LINE L2 -1 3312 3223 523 215 161 72 chr20 54217888 54218167 -17935715 - L2 LINE L2 -15 3298 2995 255 206 239 22 chr20 54218202 54218294 -17935588 + MER5A DNA MER1_type 16 127 -62 1594 142 14 18 chr20 54218433 54218708 -17935174 - AluJo SINE Alu -1 311 38 225 282 56 0 chr20 54218809 54218880 -17935002 + L2 LINE L2 3155 3229 -43 363 267 30 96 chr20 54219111 54219205 -17934677 - MER106B DNA MER1_type -74 985 886 1836 158 0 7 chr20 54219205 54219508 -17934374 + AluJb SINE Alu 1 301 -11 363 267 30 96 chr20 54219508 54219548 -17934334 - MER106B DNA MER1_type -173 886 37 258 182 0 0 chr20 54219545 54219589 -17934293 + MER106A DNA MER1_type 30 73 -163 * 741 266 120 26 chr20 54219709 54219942 -17933940 + MIR SINE MIR 8 262 0 212 371 50 21 chr20 54220110 54220250 -17933632 + L2 LINE L2 3129 3272 0 453 203 157 69 chr20 54220653 54220870 -17933012 - MLT1K LTR MaLR -26 562 327 429 198 9 45 chr20 54220897 54221008 -17932874 - MLT1K LTR MaLR -341 247 141 431 256 112 61 chr20 54221253 54221605 -17932277 + L2 LINE L2 2712 3067 -246 345 275 115 41 chr20 54222320 54222525 -17931357 - MIR SINE MIR -12 250 28 1681 174 3 3 chr20 54222584 54222888 -17930994 + AluJo SINE Alu 1 304 -8 718 102 17 0 chr20 54222888 54223006 -17930876 + (GGAA)n Simple_repeat Simple_repeat 1 120 0 389 248 40 0 chr20 54223744 54223845 -17930037 + MIR SINE MIR 158 262 0 323 297 51 18 chr20 54223959 54224136 -17929746 + L1MC/D LINE L1 5335 5513 -656 1597 181 21 3 chr20 54224384 54224672 -17929210 + AluJo SINE Alu 1 293 -19 2035 119 13 0 chr20 54225168 54225470 -17928412 - AluSg SINE Alu -4 306 1 398 241 241 0 chr20 54225852 54225960 -17927922 + Charlie8 DNA MER1_type 78 211 -2206 522 309 86 8 chr20 54225965 54226221 -17927661 - MLT1L LTR MaLR -2 613 338 230 189 57 0 chr20 54226445 54226498 -17927384 + Charlie8 DNA MER1_type 210 265 -2152 2250 96 7 0 chr20 54226673 54226975 -17926907 - AluSq SINE Alu -9 304 1 1790 136 3 23 chr20 54227066 54227367 -17926515 + AluJo SINE Alu 1 295 -17 202 306 102 19 chr20 54227417 54227525 -17926357 + MER5C DNA MER1_type 8 124 -200 1486 195 21 34 chr20 54228866 54229194 -17924688 - L1MB5 LINE L1 0 6174 5851 471 35 0 0 chr20 54229195 54229252 -17924630 + (TG)n Simple_repeat Simple_repeat 2 58 0 1853 187 67 72 chr20 54229262 54229797 -17924085 + MER51C LTR ERV1 1 640 0 1676 164 0 7 chr20 54229797 54230078 -17923804 - AluJb SINE Alu -33 279 1 2174 181 9 30 chr20 54230078 54230519 -17923363 - L1MB5 LINE L1 -295 5879 5448 3030 61 3 0 chr20 54230697 54231060 -17922822 - THE1B LTR MaLR 0 364 1 508 194 143 56 chr20 54231174 54231390 -17922492 + MER106A DNA MER1_type 2 236 0 41 21 0 0 chr20 54231401 54231449 -17922433 + AT_rich Low_complexity Low_complexity 1 48 0 483 219 11 160 chr20 54231455 54231642 -17922240 - MER5C DNA MER1_type -165 159 1 180 125 0 0 chr20 54231824 54231856 -17922026 + (TGAA)n Simple_repeat Simple_repeat 2 33 0 1751 168 28 0 chr20 54231879 54232165 -17921717 + AluJb SINE Alu 1 294 -18 414 253 102 24 chr20 54232253 54232419 -17921463 - MLT1J LTR MaLR -31 480 302 642 219 34 51 chr20 54232426 54232604 -17921278 - MLT1J LTR MaLR -316 195 21 1376 102 0 0 chr20 54233214 54233420 -17920462 + L1MA2 LINE L1 6099 6304 0 26 0 0 0 chr20 54233420 54233446 -17920436 + AT_rich Low_complexity Low_complexity 1 26 0 1591 174 25 0 chr20 54233514 54233835 -17920047 - L1MDa LINE L1 -4443 2097 1769 643 250 60 22 chr20 54233880 54234064 -17919818 + MIR SINE MIR 57 247 -15 198 156 0 0 chr20 54234072 54234117 -17919765 + (TGAA)n Simple_repeat Simple_repeat 2 46 0 192 265 20 0 chr20 54234241 54234290 -17919592 + MIR SINE MIR 104 153 -55 368 280 16 111 chr20 54234300 54234343 -17919539 + MER5B DNA MER1_type 4 49 -129 180 0 0 0 chr20 54234343 54234363 -17919519 + (TTG)n Simple_repeat Simple_repeat 2 21 0 368 280 16 111 chr20 54234363 54234508 -17919374 + MER5B DNA MER1_type 49 174 -4 2308 171 92 107 chr20 54234891 54235033 -17918849 + L1MB3 LINE L1 4574 4717 -1449 1947 125 21 3 chr20 54235033 54235321 -17918561 + AluSq SINE Alu 1 293 -20 2308 171 92 107 chr20 54235321 54235463 -17918419 + L1MB3 LINE L1 4717 4860 -1306 772 98 9 0 chr20 54235463 54235575 -17918307 + L1MA1 LINE L1 6186 6298 -4 2308 171 92 107 chr20 54235575 54235637 -17918245 + L1MB3 LINE L1 4860 4921 -1245 229 174 0 0 chr20 54235637 54235683 -17918199 + LTR66 LTR ERVL 394 439 -171 2308 171 92 107 chr20 54235683 54236452 -17917430 + L1MB3 LINE L1 4921 5731 -435 905 152 18 6 chr20 54236477 54236642 -17917240 + L1MB3 LINE L1 6010 6176 -7 1142 183 0 17 chr20 54236656 54236835 -17917047 - AluJo SINE Alu 0 312 136 2087 112 0 3 chr20 54236835 54237129 -17916753 - AluSg SINE Alu -17 293 1 1142 183 0 17 chr20 54237129 54237179 -17916703 - AluJo SINE Alu -176 136 87 640 190 88 7 chr20 54237179 54237316 -17916566 + L1ME LINE L1 5455 5602 -564 422 165 0 59 chr20 54237326 54237411 -17916471 - AluJo SINE Alu -231 81 2 299 287 93 19 chr20 54237461 54237569 -17916313 - MIR SINE MIR -63 199 84 399 304 87 0 chr20 54238387 54238502 -17915380 + L2 LINE L2 3143 3267 -5 266 264 56 0 chr20 54238592 54238664 -17915218 + L1MD3 LINE L1 7912 7987 -8 183 303 45 68 chr20 54238873 54238889 -17914993 + MER5A DNA MER1_type 1 13 -176 252 234 171 57 chr20 54238889 54239047 -17914835 - MER5B DNA MER1_type -2 176 1 395 267 12 0 chr20 54239357 54239443 -17914439 - L2 LINE L2 -1 3312 3226 1075 281 122 13 chr20 54239476 54239861 -17914021 + LTR16C LTR ERVL 65 491 0 185 225 25 0 chr20 54239861 54239901 -17913981 - L2 LINE L2 -93 3220 3180 746 261 124 29 chr20 54240324 54240631 -17913251 + MER102b DNA MER1_type 6 341 0 2245 92 3 0 chr20 54240651 54240957 -17912925 + AluSq SINE Alu 1 307 -6 229 255 0 0 chr20 54241014 54241065 -17912817 - L2 LINE L2 0 3313 3263 289 245 219 40 chr20 54241168 54241319 -17912563 - MIR SINE MIR -76 186 9 6029 108 9 7 chr20 54241516 54242376 -17911506 - L1PA15 LINE L1 0 6165 5304 1365 259 61 20 chr20 54242441 54242897 -17910985 - MLT1K LTR MaLR 0 476 2 301 355 0 0 chr20 54242897 54243004 -17910878 - MLT1K LTR MaLR -481 107 1 288 0 0 0 chr20 54244153 54244185 -17909697 + (CA)n Simple_repeat Simple_repeat 1 32 0 410 257 12 7 chr20 54244653 54244795 -17909087 + L1MC4a LINE L1 5548 5695 -426 236 192 14 41 chr20 54244965 54245038 -17908844 + Charlie7 DNA MER1_type 2537 2607 -5 1680 200 116 8 chr20 54245038 54245408 -17908474 - MLT1D LTR MaLR 0 505 96 638 250 40 66 chr20 54245429 54245768 -17908114 + L1MC4a LINE L1 5689 6016 -105 1843 199 10 15 chr20 54245809 54246211 -17907671 + L1ME1 LINE L1 2639 3038 -3108 315 81 16 32 chr20 54246236 54246298 -17907584 + (GGGA)n Simple_repeat Simple_repeat 4 64 0 591 107 66 17 chr20 54246301 54246433 -17907449 + L1MA8 LINE L1 5983 6117 -180 1472 152 15 45 chr20 54246433 54246702 -17907180 - THE1B LTR MaLR 0 364 104 1159 151 17 0 chr20 54246707 54246886 -17906996 - AluJo SINE Alu -30 282 101 648 118 27 27 chr20 54246886 54246996 -17906886 + THE1B LTR MaLR 231 340 -24 * 726 114 9 19 chr20 54246994 54247099 -17906783 - THE1B LTR MaLR -260 104 1 885 126 81 6 chr20 54247099 54247273 -17906609 + L1MA8 LINE L1 6102 6288 -3 2230 112 0 0 chr20 54247318 54247630 -17906252 + AluSx SINE Alu 1 312 0 2093 112 0 0 chr20 54247674 54247960 -17905922 - AluSx SINE Alu -26 286 1 3532 209 70 64 chr20 54248100 54248732 -17905150 + L1ME1 LINE L1 4172 4799 -1367 1542 180 14 0 chr20 54248732 54249010 -17904872 + AluJo SINE Alu 1 282 -30 3532 209 70 64 chr20 54249010 54249115 -17904767 + L1ME1 LINE L1 4799 4902 -1264 2144 103 0 3 chr20 54249115 54249415 -17904467 + AluSx SINE Alu 1 299 -13 3532 209 70 64 chr20 54249415 54249784 -17904098 + L1ME1 LINE L1 4902 5267 -899 2149 96 3 3 chr20 54249784 54250075 -17903807 + AluSx SINE Alu 1 291 -21 1758 160 13 0 chr20 54250085 54250385 -17903497 + AluJb SINE Alu 7 310 -2 3532 209 70 64 chr20 54250385 54250647 -17903235 + L1ME1 LINE L1 5275 5534 -632 2091 136 0 3 chr20 54250647 54250957 -17902925 - AluJo SINE Alu -3 309 1 3532 209 70 64 chr20 54250957 54251186 -17902696 + L1ME1 LINE L1 5534 5760 -406 2251 102 0 0 chr20 54251186 54251489 -17902393 + AluSc SINE Alu 1 303 -6 3532 209 70 64 chr20 54251489 54251830 -17902052 + L1ME1 LINE L1 5760 6160 -6 2466 128 24 49 chr20 54251950 54252024 -17901858 - MSTA LTR MaLR 0 426 352 838 165 0 0 chr20 54252024 54252157 -17901725 + FLAM_C SINE Alu 1 133 0 2466 128 24 49 chr20 54252157 54252566 -17901316 - MSTA LTR MaLR -74 352 1 186 275 0 101 chr20 54253185 54253254 -17900628 + MIR3 SINE MIR 131 192 -16 255 346 27 0 chr20 54253269 54253381 -17900501 + MIR SINE MIR 45 158 -62 192 262 12 60 chr20 54253649 54253733 -17900149 - MIR SINE MIR -23 239 160 2128 102 3 25 chr20 54253765 54254080 -17899802 + AluSx SINE Alu 1 308 -4 180 282 132 114 chr20 54254317 54254421 -17899461 + L2 LINE L2 3028 3129 -184 1511 153 55 7 chr20 54254421 54254695 -17899187 - AluJo SINE Alu -25 287 1 180 282 132 114 chr20 54254695 54254870 -17899012 + L2 LINE L2 3129 3312 -1 877 192 10 61 chr20 54255380 54255578 -17898304 - MER5A DNA MER1_type -1 188 1 484 204 19 10 chr20 54255619 54255722 -17898160 + MER5B DNA MER1_type 2 105 -73 766 246 11 0 chr20 54255857 54256032 -17897850 + MER5B DNA MER1_type 2 178 0 2074 114 0 29 chr20 54256050 54256358 -17897524 - AluSx SINE Alu -11 301 3 485 324 29 0 chr20 54256378 54256585 -17897297 - L1MA9 LINE L1 -41 6271 6059 254 99 25 161 chr20 54257248 54257277 -17896605 - LTR67 LTR ERVL -17 540 509 1507 193 0 20 chr20 54257277 54257577 -17896305 + AluJb SINE Alu 1 294 -18 254 99 25 161 chr20 54257577 54257628 -17896254 - LTR67 LTR ERVL -48 509 471 267 284 10 39 chr20 54258727 54258829 -17895053 - LTR67 LTR ERVL 0 557 459 3554 121 42 42 chr20 54259116 54259729 -17894153 - LTR18B LTR ERVL 0 614 2 526 236 8 16 chr20 54260159 54260286 -17893596 + MER112 DNA MER1_type 1 126 -134 1375 141 97 19 chr20 54260573 54260842 -17893040 + AluJo SINE Alu 1 290 -22 1792 252 108 34 chr20 54260961 54261782 -17892100 + HAL1 LINE L1 995 1876 -631 371 179 90 90 chr20 54262409 54262543 -17891339 + HAL1 LINE L1 2245 2378 -129 320 278 209 8 chr20 54264473 54264736 -17889146 + L2 LINE L2 2546 2861 -453 971 249 172 3 chr20 54264783 54265068 -17888814 - LTR16C LTR ERVL -10 481 149 1417 154 114 0 chr20 54265093 54265339 -17888543 + AluJo SINE Alu 11 284 -28 234 339 16 41 chr20 54265358 54265479 -17888403 - LTR16C LTR ERVL -373 118 1 506 312 108 52 chr20 54265511 54265780 -17888102 + L2 LINE L2 2989 3272 0 456 184 123 18 chr20 54265788 54265824 -17888058 + L2 LINE L2 3187 3218 -95 345 24 0 0 chr20 54265824 54265866 -17888016 + (GTTTG)n Simple_repeat Simple_repeat 3 44 0 456 184 123 18 chr20 54265866 54265943 -17887939 + L2 LINE L2 3218 3312 -1 1106 245 48 16 chr20 54265979 54266289 -17887593 + MER102b DNA MER1_type 12 331 -10 449 242 164 24 chr20 54266303 54266468 -17887414 - MIR3 SINE MIR 0 208 21 1304 227 51 97 chr20 54266622 54266895 -17886987 - MLT1J LTR MaLR -34 477 236 1924 145 3 6 chr20 54266895 54267206 -17886676 - AluJo SINE Alu -1 311 2 1304 227 51 97 chr20 54267206 54267426 -17886456 - MLT1J LTR MaLR -275 236 7 216 333 12 12 chr20 54267503 54267584 -17886298 - L2 LINE L2 -1006 2308 2228 182 343 80 36 chr20 54267618 54267755 -17886127 - MIR3 SINE MIR -62 146 4 642 260 78 34 chr20 54267821 54268224 -17885658 - MLT1K LTR MaLR -55 533 45 3423 193 60 31 chr20 54268918 54269251 -17884631 - L1ME1 LINE L1 -4 6162 5840 1977 178 3 21 chr20 54269251 54269633 -17884249 - THE1C LTR MaLR 0 375 1 3423 193 60 31 chr20 54269633 54270559 -17883323 - L1ME1 LINE L1 -326 5840 4859 1971 136 0 0 chr20 54270559 54270846 -17883036 + AluSx SINE Alu 1 287 -25 3423 193 60 31 chr20 54270846 54271012 -17882870 - L1ME1 LINE L1 -1307 4859 4699 266 273 0 74 chr20 54271072 54271163 -17882719 + L2 LINE L2 2929 3010 -303 2207 107 0 0 chr20 54271163 54271461 -17882421 + AluSx SINE Alu 1 298 -14 266 273 0 74 chr20 54271461 54271490 -17882392 + L2 LINE L2 3010 3040 -273 570 159 15 23 chr20 54271601 54271733 -17882149 - MER96B DNA MER1_type? -42 375 245 226 0 0 56 chr20 54271900 54271936 -17881946 + (TTTTTG)n Simple_repeat Simple_repeat 2 35 0 407 260 0 0 chr20 54272056 54272156 -17881726 + L2 LINE L2 3171 3270 -2 564 187 35 225 chr20 54272897 54273063 -17880819 - L2 LINE L2 -5 3308 3112 1975 148 0 3 chr20 54273063 54273374 -17880508 + AluSx SINE Alu 1 310 -2 822 155 23 0 chr20 54273379 54273508 -17880374 + FLAM_C SINE Alu 1 132 -1 564 187 35 225 chr20 54273508 54273881 -17880001 - L2 LINE L2 -205 3108 2867 2549 118 40 15 chr20 54273953 54274358 -17879524 + MSTB1 LTR MaLR 16 430 -2 1690 142 61 3 chr20 54274380 54274675 -17879207 - AluJo SINE Alu 0 312 1 225 291 19 109 chr20 54274684 54274894 -17878988 - L2 LINE L2 -609 2705 2515 763 152 0 8 chr20 54275377 54275502 -17878380 - FLAM_C SINE Alu -18 125 2 899 201 116 0 chr20 54275561 54275750 -17878132 + MER20 DNA MER1_type 1 211 -8 509 261 70 30 chr20 54275881 54276059 -17877823 - MIR SINE MIR -42 220 32 1404 156 92 14 chr20 54276059 54276342 -17877540 - AluJb SINE Alu -7 305 1 509 261 70 30 chr20 54276342 54276362 -17877520 - MIR SINE MIR -230 32 14 439 266 57 0 chr20 54276427 54276551 -17877331 + L2 LINE L2 3183 3313 0 526 149 50 25 chr20 54276802 54276923 -17876959 - HAL1 LINE L1 -864 1643 1520 331 318 37 0 chr20 54276939 54277046 -17876836 + HAL1 LINE L1 1857 1967 -540 302 192 137 14 chr20 54277048 54277121 -17876761 + HAL1 LINE L1 2036 2117 -390 989 200 132 122 chr20 54277122 54277622 -17876260 - MLT1H LTR MaLR -2 547 43 1416 158 0 44 chr20 54277705 54277977 -17875905 + AluJo SINE Alu 38 297 -15 511 262 89 33 chr20 54277980 54278251 -17875631 + HAL1 LINE L1 2180 2465 -42 228 333 42 0 chr20 54278387 54278459 -17875423 - L2 LINE L2 -191 3081 3007 309 259 49 91 chr20 54278512 54278655 -17875227 - MIR SINE MIR -57 205 69 2145 117 0 3 chr20 54278683 54278992 -17874890 - AluSx SINE Alu -3 309 2 296 246 80 86 chr20 54279201 54279376 -17874506 - MLT1K LTR MaLR -412 176 3 2037 104 4 0 chr20 54280154 54280434 -17873448 + AluSq SINE Alu 1 281 -32 180 0 0 0 chr20 54280435 54280455 -17873427 + (TAA)n Simple_repeat Simple_repeat 2 21 0 2225 166 39 10 chr20 54280479 54280889 -17872993 + MSTA LTR MaLR 1 422 -6 244 332 90 71 chr20 54281128 54281339 -17872543 + L2 LINE L2 2867 3081 -191 234 295 144 51 chr20 54281400 54281892 -17871990 + L2 LINE L2 2538 3081 -191 2400 81 0 0 chr20 54281988 54282298 -17871584 - AluSq SINE Alu -3 310 1 588 264 50 50 chr20 54282373 54282634 -17871248 + LTR16C LTR ERVL 231 491 0 263 237 17 0 chr20 54282744 54282803 -17871079 + MER5A DNA MER1_type 41 100 -89 2043 92 9 51 chr20 54282815 54283130 -17870752 - AluSx SINE Alu -10 302 1 1954 172 65 36 chr20 54285211 54285621 -17868261 + L1MB5 LINE L1 5707 6132 -42 1801 124 0 28 chr20 54285621 54285746 -17868136 + AluJo SINE Alu 17 144 -168 2160 103 3 3 chr20 54285746 54286048 -17867834 + AluSx SINE Alu 1 302 -10 1801 124 0 28 chr20 54286048 54286204 -17867678 + AluJo SINE Alu 144 290 -22 1954 172 65 36 chr20 54286204 54286249 -17867633 + L1MB5 LINE L1 6132 6174 0 853 240 44 44 chr20 54286685 54286896 -17866986 - L1M4 LINE L1 -2459 3687 3477 243 0 0 0 chr20 54286896 54286923 -17866959 + (TTG)n Simple_repeat Simple_repeat 1 27 0 1883 125 10 3 chr20 54286925 54287213 -17866669 - AluSx SINE Alu -22 290 1 853 240 44 44 chr20 54287213 54287315 -17866567 - L1M4 LINE L1 -2669 3477 3371 457 118 47 47 chr20 54287405 54287490 -17866392 + AluJo SINE Alu 50 134 -178 247 293 201 11 chr20 54287507 54287681 -17866201 - MIR SINE MIR -40 222 16 929 211 31 0 chr20 54287821 54288063 -17865819 + Charlie8 DNA MER1_type 71 262 -2155 277 248 0 69 chr20 54288064 54288101 -17865781 + L2 LINE L2 3130 3168 -145 2280 77 0 23 chr20 54288101 54288401 -17865481 - AluY SINE Alu -1 310 18 277 248 0 69 chr20 54288401 54288464 -17865418 + L2 LINE L2 3168 3223 -90 843 252 30 21 chr20 54288484 54288508 -17865374 + MIR SINE MIR 1 23 -239 1068 181 13 68 chr20 54288508 54288745 -17865137 + MER58A DNA MER1_type 1 224 0 843 252 30 21 chr20 54288745 54288954 -17864928 + MIR SINE MIR 23 236 -26 1372 78 26 0 chr20 54288982 54289173 -17864709 - L1MA5A LINE L1 0 6297 6102 3480 142 52 72 chr20 54289178 54289529 -17864353 - LTR62 LTR ERVK -2 717 360 2201 94 35 3 chr20 54289529 54289815 -17864067 + AluSx SINE Alu 1 295 -17 3480 142 52 72 chr20 54289815 54290195 -17863687 - LTR62 LTR ERVK -359 360 1 659 193 0 0 chr20 54290461 54290575 -17863307 - MER81 DNA DNA 0 114 1 2543 62 3 7 chr20 54290868 54291174 -17862708 - AluY SINE Alu -6 305 1 242 200 60 70 chr20 54292230 54292330 -17861552 - MIR SINE MIR -151 111 13 1146 193 28 0 chr20 54292549 54292761 -17861121 + MER20B DNA MER1_type 2 219 0 21 36 0 0 chr20 54292925 54292953 -17860929 + AT_rich Low_complexity Low_complexity 1 28 0 1881 102 0 0 chr20 54293142 54293378 -17860504 + AluSx SINE Alu 1 236 -76 571 252 29 7 chr20 54294447 54294586 -17859296 + MIR SINE MIR 8 149 -113 654 252 197 23 chr20 54294640 54294661 -17859221 - L2 LINE L2 0 3313 3297 2124 133 0 7 chr20 54294661 54294961 -17858921 + AluSx SINE Alu 1 298 -14 654 252 197 23 chr20 54294961 54295501 -17858381 - L2 LINE L2 -16 3297 2647 681 224 17 70 chr20 54295940 54296082 -17857800 - MER20B DNA MER1_type -41 742 617 2654 52 0 3 chr20 54296082 54296392 -17857490 - AluY SINE Alu -2 309 1 681 224 17 70 chr20 54296392 54296490 -17857392 - MER20B DNA MER1_type -166 617 515 1196 231 39 19 chr20 54296608 54296637 -17857245 - MER20B DNA MER1_type -465 318 291 2336 100 3 0 chr20 54296637 54296937 -17856945 + AluSq SINE Alu 3 303 -10 1196 231 39 19 chr20 54296937 54297219 -17856663 - MER20B DNA MER1_type -492 291 1 913 181 103 25 chr20 54297285 54297687 -17856195 + MLT1D LTR MaLR 1 462 -5 549 236 9 90 chr20 54297694 54297796 -17856086 - MER113 DNA MER1_type? -304 217 143 1635 178 69 0 chr20 54297796 54298071 -17855811 - AluJo SINE Alu -14 298 5 549 236 9 90 chr20 54298071 54298201 -17855681 - MER113 DNA MER1_type? -378 143 4 366 333 0 8 chr20 54298365 54298494 -17855388 - MIR SINE MIR -127 135 8 503 289 83 18 chr20 54298845 54299189 -17854693 - MLT1K LTR MaLR -6 582 183 2454 183 101 28 chr20 54299359 54299923 -17853959 - MER77 LTR ERV1 0 605 1 237 255 31 51 chr20 54300123 54300221 -17853661 + MIR SINE MIR 9 104 -104 250 239 0 14 chr20 54300270 54300341 -17853541 - MIR SINE MIR -6 256 187 243 61 0 0 chr20 54300398 54300431 -17853451 + (CA)n Simple_repeat Simple_repeat 1 33 0 788 217 60 32 chr20 54300496 54300673 -17853209 - MER58A DNA MER1_type -2197 223 37 2657 53 0 0 chr20 54300673 54300977 -17852905 + AluY SINE Alu 1 304 -7 788 217 60 32 chr20 54300977 54301016 -17852866 - MER58A DNA MER1_type -2383 37 1 460 196 209 0 chr20 54301101 54301249 -17852633 - MIR SINE MIR -68 194 16 269 87 0 22 chr20 54301280 54301326 -17852556 + (TTA)n Simple_repeat Simple_repeat 2 46 0 844 117 0 0 chr20 54301549 54301669 -17852213 + FLAM_C SINE Alu 23 142 -1 863 165 65 24 chr20 54301702 54301872 -17852010 + FRAM SINE Alu 1 172 -4 1890 143 7 0 chr20 54302309 54302588 -17851294 + AluJo SINE Alu 21 301 -11 250 300 11 11 chr20 54303185 54303275 -17850607 - MIR SINE MIR -1 261 172 3058 31 0 0 chr20 54303625 54303977 -17849905 + L1PA3 LINE L1 5801 6152 -3 2140 95 20 20 chr20 54304295 54304591 -17849291 + AluJb SINE Alu 1 296 -16 488 280 53 68 chr20 54304762 54305101 -17848781 - L1MC4a LINE L1 -245 5921 5588 * 813 263 36 63 chr20 54305097 54305254 -17848628 - HAL1 LINE L1 -7 2500 2340 2377 98 3 0 chr20 54305254 54305559 -17848323 - AluSp SINE Alu -7 306 1 813 263 36 63 chr20 54305559 54305842 -17848040 - HAL1 LINE L1 -167 2340 2072 26 30 0 0 chr20 54306302 54306335 -17847547 + AT_rich Low_complexity Low_complexity 1 33 0 770 223 112 29 chr20 54306445 54306553 -17847329 + MIR SINE MIR 32 130 -132 1726 147 130 69 chr20 54306553 54306960 -17846922 - MSTB1 LTR MaLR 0 432 1 770 223 112 29 chr20 54306960 54307057 -17846825 + MIR SINE MIR 130 254 -8 233 121 0 0 chr20 54307112 54307145 -17846737 - MER5B DNA MER1_type -1 177 145 881 233 6 0 chr20 54307151 54307327 -17846555 - MER5B DNA MER1_type -1 177 1 864 222 69 135 chr20 54307345 54307678 -17846204 - MLT1I LTR MaLR 0 409 99 337 180 55 142 chr20 54307680 54307863 -17846019 - HAL1 LINE L1 -168 2339 2173 583 223 76 60 chr20 54307894 54308078 -17845804 - MER58C DNA MER1_type -28 187 1 291 216 72 65 chr20 54308204 54308343 -17845539 - L1ME4a LINE L1 -207 5914 5775 222 208 0 0 chr20 54309057 54309105 -17844777 + T-rich Low_complexity Low_complexity 1 48 0 2355 75 13 0 chr20 54309912 54310218 -17843664 + AluY SINE Alu 1 310 -1 202 146 98 0 chr20 54310491 54310532 -17843350 + MIR SINE MIR 109 153 -55 284 200 20 0 chr20 54360748 54360798 -17793084 + MLT1E LTR MaLR 361 411 -182 283 200 60 70 chr20 54361867 54361967 -17791915 - MIR SINE MIR -151 111 13 1151 193 28 0 chr20 54362186 54362398 -17791484 + MER20B DNA MER1_type 2 219 0 21 36 0 0 chr20 54362562 54362590 -17791292 + AT_rich Low_complexity Low_complexity 1 28 0 1775 102 0 0 chr20 54362779 54363015 -17790867 + AluSx SINE Alu 1 236 -76 611 267 142 6 chr20 54364084 54364260 -17789622 + MIR SINE MIR 8 207 -55 795 253 197 23 chr20 54364277 54364298 -17789584 - L2 LINE L2 0 3313 3297 2022 130 0 7 chr20 54364298 54364598 -17789284 + AluSx SINE Alu 1 298 -14 795 253 197 23 chr20 54364598 54365138 -17788744 - L2 LINE L2 -16 3297 2647 711 237 17 35 chr20 54365577 54365710 -17788172 - MER20B DNA MER1_type -41 742 613 2489 58 0 3 chr20 54365710 54366022 -17787860 - AluY SINE Alu 0 311 1 711 237 17 35 chr20 54366022 54366120 -17787762 - MER20B DNA MER1_type -170 613 515 1180 234 39 19 chr20 54366238 54366267 -17787615 - MER20B DNA MER1_type -465 318 291 2211 100 3 0 chr20 54366267 54366567 -17787315 + AluSq SINE Alu 3 303 -10 1180 234 39 19 chr20 54366567 54366849 -17787033 - MER20B DNA MER1_type -492 291 1 930 185 101 24 chr20 54366915 54367317 -17786565 + MLT1D LTR MaLR 1 462 -5 544 236 9 90 chr20 54367324 54367426 -17786456 - MER113 DNA MER1_type? -304 217 143 1530 178 69 0 chr20 54367426 54367701 -17786181 - AluJo SINE Alu -14 298 5 544 236 9 90 chr20 54367701 54367831 -17786051 - MER113 DNA MER1_type? -378 143 4 424 336 7 7 chr20 54367987 54368124 -17785758 - MIR SINE MIR -118 144 8 531 287 83 18 chr20 54368475 54368819 -17785063 - MLT1K LTR MaLR -6 582 183 2475 183 101 28 chr20 54368989 54369553 -17784329 - MER77 LTR ERV1 0 605 1 276 255 31 51 chr20 54369753 54369851 -17784031 + MIR SINE MIR 9 104 -104 293 239 0 14 chr20 54369900 54369971 -17783911 - MIR SINE MIR -6 256 187 243 61 0 0 chr20 54370028 54370061 -17783821 + (CA)n Simple_repeat Simple_repeat 1 33 0 779 217 60 32 chr20 54370126 54370303 -17783579 - MER58A DNA MER1_type -2197 223 37 2521 53 0 0 chr20 54370303 54370607 -17783275 + AluY SINE Alu 1 304 -7 779 217 60 32 chr20 54370607 54370646 -17783236 - MER58A DNA MER1_type -2383 37 1 532 196 209 0 chr20 54370731 54370879 -17783003 - MIR SINE MIR -68 194 16 269 87 0 22 chr20 54370910 54370956 -17782926 + (TTA)n Simple_repeat Simple_repeat 2 46 0 824 117 0 0 chr20 54371179 54371299 -17782583 + FLAM_C SINE Alu 23 142 -1 806 165 65 24 chr20 54371332 54371502 -17782380 + FRAM SINE Alu 1 172 -4 1780 143 7 0 chr20 54371939 54372218 -17781664 + AluJo SINE Alu 21 301 -11 295 316 11 11 chr20 54372815 54372910 -17780972 - MIR SINE MIR -1 261 167 3061 29 0 0 chr20 54373255 54373606 -17780276 + L1PA3 LINE L1 5801 6151 -4 2011 95 20 20 chr20 54373925 54374221 -17779661 + AluJb SINE Alu 1 296 -16 477 280 53 68 chr20 54374392 54374731 -17779151 - L1MC4a LINE L1 -245 5921 5588 * 822 261 36 63 chr20 54374727 54374884 -17778998 - HAL1 LINE L1 -7 2500 2340 2178 99 13 0 chr20 54374884 54375186 -17778696 - AluSp SINE Alu -7 306 1 822 261 36 63 chr20 54375186 54375469 -17778413 - HAL1 LINE L1 -167 2340 2072 26 30 0 0 chr20 54375929 54375962 -17777920 + AT_rich Low_complexity Low_complexity 1 33 0 859 223 112 29 chr20 54376072 54376180 -17777702 + MIR SINE MIR 32 130 -132 1723 147 130 69 chr20 54376180 54376587 -17777295 - MSTB1 LTR MaLR 0 432 1 859 223 112 29 chr20 54376587 54376684 -17777198 + MIR SINE MIR 130 254 -8 247 121 0 0 chr20 54376739 54376772 -17777110 - MER5B DNA MER1_type -1 177 145 882 233 6 0 chr20 54376778 54376954 -17776928 - MER5B DNA MER1_type -1 177 1 869 222 69 135 chr20 54376972 54377305 -17776577 - MLT1I LTR MaLR 0 409 99 337 180 55 142 chr20 54377307 54377490 -17776392 - HAL1 LINE L1 -168 2339 2173 586 223 76 60 chr20 54377521 54377705 -17776177 - MER58C DNA MER1_type -28 187 1 315 216 72 65 chr20 54377831 54377970 -17775912 - L1ME4a LINE L1 -207 5914 5775 189 214 0 0 chr20 54378684 54378726 -17775156 + T-rich Low_complexity Low_complexity 1 42 0 2230 75 13 0 chr20 54379533 54379839 -17774043 + AluY SINE Alu 1 310 -1 220 174 87 6 chr20 54380088 54380153 -17773729 + MIR SINE MIR 82 153 -55 302 267 78 0 chr20 54380395 54380485 -17773397 - MLT1K LTR MaLR -7 581 485 182 288 51 0 chr20 54380515 54380574 -17773308 + L2 LINE L2 3163 3224 -48 * 1106 270 103 46 chr20 54380567 54381076 -17772806 - L2 LINE L2 -129 3184 2594 2240 109 0 6 chr20 54381076 54381388 -17772494 + AluSx SINE Alu 3 312 0 1106 270 103 46 chr20 54381388 54381731 -17772151 - L2 LINE L2 -719 2594 2272 937 297 108 16 chr20 54382258 54382512 -17771370 - L2 LINE L2 -20 3293 3064 1899 117 30 23 chr20 54382512 54382811 -17771071 - AluSx SINE Alu -9 303 3 937 297 108 16 chr20 54382811 54383160 -17770722 - L2 LINE L2 -249 3064 2640 2315 93 0 0 chr20 54383234 54383544 -17770338 + AluSx SINE Alu 1 310 -2 471 248 134 6 chr20 54383647 54383804 -17770078 + MIR SINE MIR 54 230 -32 501 122 89 0 chr20 54384467 54384557 -17769325 + AluY SINE Alu 207 304 -7 1667 122 34 61 chr20 54385019 54385313 -17768569 + AluSx SINE Alu 1 286 -26 186 103 0 0 chr20 54385320 54385349 -17768533 + (CATA)n Simple_repeat Simple_repeat 2 30 0 259 248 40 50 chr20 54385674 54385775 -17768107 + L2 LINE L2 2546 2645 -669 343 250 54 27 chr20 54385801 54385913 -17767969 - MLT1J LTR MaLR -43 468 354 1705 148 4 0 chr20 54385944 54386214 -17767668 - AluJo SINE Alu -31 281 11 854 167 154 47 chr20 54386223 54386457 -17767425 - MLT1J LTR MaLR -245 266 8 583 306 138 41 chr20 54386457 54386546 -17767336 + L2 LINE L2 2649 2728 -585 1968 133 0 0 chr20 54386546 54386839 -17767043 + AluSx SINE Alu 1 293 -19 583 306 138 41 chr20 54386839 54387346 -17766536 + L2 LINE L2 2728 3301 -12 188 158 0 26 chr20 54387312 54387350 -17766532 + MIR SINE MIR 223 259 -3 * 2121 119 3 0 chr20 54387987 54388298 -17765584 + AluSx SINE Alu 1 312 0 592 152 0 10 chr20 54388314 54388413 -17765469 + AluSg/x SINE Alu 208 305 -7 298 242 121 24 chr20 54388419 54388543 -17765339 + MER20B DNA MER1_type 54 189 -594 189 0 0 0 chr20 54388649 54388670 -17765212 + (CAAAA)n Simple_repeat Simple_repeat 5 25 0 1786 123 10 58 chr20 54388816 54389125 -17764757 + AluJb SINE Alu 1 294 -18 272 395 6 13 chr20 54389230 54389381 -17764501 + MIR SINE MIR 1 152 -72 * 939 215 146 26 chr20 54389373 54389470 -17764412 - MIR SINE MIR 0 262 178 1634 189 24 80 chr20 54389470 54389883 -17763999 - MLT1B LTR MaLR 0 390 1 939 215 146 26 chr20 54389883 54390018 -17763864 - MIR SINE MIR -84 178 2 1988 119 0 31 chr20 54390254 54390277 -17763605 - AluSx SINE Alu -3 309 287 369 0 0 0 chr20 54390277 54390318 -17763564 + (TG)n Simple_repeat Simple_repeat 2 42 0 1988 119 0 31 chr20 54390318 54390613 -17763269 - AluSx SINE Alu -25 287 1 576 211 16 8 chr20 54390906 54391034 -17762848 - MIR SINE MIR -28 234 106 653 255 98 5 chr20 54391056 54391240 -17762642 - MIR SINE MIR -16 246 46 817 153 0 0 chr20 54391352 54391476 -17762406 + AluSx SINE Alu 1 124 -188 321 197 0 0 chr20 54391476 54391542 -17762340 + (CATA)n Simple_repeat Simple_repeat 3 68 0 396 289 0 0 chr20 54391547 54391637 -17762245 - L1MC4 LINE L1 -1339 6703 6614 1192 122 0 0 chr20 54391641 54391813 -17762069 + AluSx SINE Alu 133 304 -8 2208 107 3 0 chr20 54392530 54392838 -17761044 + AluSx SINE Alu 1 309 -3 296 284 65 89 chr20 54392942 54393403 -17760479 + L1 LINE L1 3209 3658 -2488 234 245 0 0 chr20 54393539 54393588 -17760294 + MIR3 SINE MIR 109 157 -51 2103 120 0 7 chr20 54393692 54393993 -17759889 + AluSq SINE Alu 3 301 -12 4518 161 59 104 chr20 54394000 54395165 -17758717 + L1MC3 LINE L1 6649 7761 -24 1703 96 9 0 chr20 54395165 54395395 -17758487 + AluSx SINE Alu 1 232 -80 692 181 63 70 chr20 54395396 54395667 -17758215 - L2 LINE L2 -421 2893 2625 764 104 0 0 chr20 54495668 54495806 -17658076 + FRAM SINE Alu 41 178 0 1871 104 0 54 chr20 54495806 54496127 -17657755 + AluSg SINE Alu 1 305 0 262 224 0 0 chr20 54496157 54496206 -17657676 + MER96B DNA MER1_type? 190 238 -179 281 151 19 0 chr20 54496868 54496921 -17656961 + L2 LINE L2 2312 2365 -949 974 253 56 0 chr20 54496933 54497166 -17656716 - MIR SINE MIR 0 262 17 21 0 0 0 chr20 54497237 54497258 -17656624 + AT_rich Low_complexity Low_complexity 1 21 0 882 296 57 52 chr20 54497337 54497756 -17656126 - LTR16C LTR ERVL 0 491 71 1319 273 13 3 chr20 54497821 54498125 -17655757 - LTR16C LTR ERVL -106 385 79 242 342 104 43 chr20 54498232 54498463 -17655419 - MIR SINE MIR -12 250 6 524 247 49 25 chr20 54499204 54499366 -17654516 + MIR3 SINE MIR 38 203 -5 602 257 65 64 chr20 54499479 54499778 -17654104 + L1ME4a LINE L1 5392 5683 -452 426 259 126 23 chr20 54499780 54499916 -17653966 + L1ME4a LINE L1 5861 6020 -101 2177 89 10 13 chr20 54499916 54500220 -17653662 + AluSx SINE Alu 1 303 -9 426 259 126 23 chr20 54500220 54500257 -17653625 + L1ME4a LINE L1 6020 6052 -69 536 252 68 59 chr20 54500275 54500497 -17653385 + L2 LINE L2 2991 3214 -99 393 294 0 7 chr20 54500567 54500703 -17653179 + L1ME LINE L1 5676 5810 -311 318 328 31 31 chr20 54501022 54501217 -17652665 - L1ME LINE L1 -325 5796 5602 186 43 0 0 chr20 54501220 54501243 -17652639 + (TTTA)n Simple_repeat Simple_repeat 4 26 0 533 94 0 203 chr20 54501272 54501351 -17652531 + AluSq/x SINE Alu 44 89 -223 2268 99 0 0 chr20 54501351 54501655 -17652227 + AluSg SINE Alu 5 308 -2 533 94 0 203 chr20 54501655 54501703 -17652179 + AluSq/x SINE Alu 89 145 -167 456 286 153 17 chr20 54501737 54502047 -17651835 - L1ME LINE L1 -573 5597 5245 221 169 17 0 chr20 54502273 54502332 -17651550 + (TA)n Simple_repeat Simple_repeat 1 60 0 686 204 126 47 chr20 54502568 54502759 -17651123 - MER63A DNA MER1_type -4 206 1 699 287 91 11 chr20 54502759 54503034 -17650848 - LTR33 LTR ERVL -187 334 38 414 296 110 54 chr20 54503286 54503746 -17650136 - L1ME LINE L1 -1639 4507 3987 575 101 0 0 chr20 54503746 54503825 -17650057 - MADE1 DNA Mariner -1 79 1 414 296 110 54 chr20 54503825 54504118 -17649764 - L1ME LINE L1 -2159 3987 3712 1470 210 6 22 chr20 54504291 54504605 -17649277 - AluJo SINE Alu -3 309 1 369 284 108 56 chr20 54504657 54504907 -17648975 - L1ME LINE L1 -2694 3452 3190 426 306 65 25 chr20 54504961 54505160 -17648722 + MIR SINE MIR 49 255 -7 694 187 183 57 chr20 54505161 54505391 -17648491 - MLT2B1 LTR ERVL -1 519 261 1827 108 79 11 chr20 54506279 54506558 -17647324 + AluSx SINE Alu 1 298 -14 299 276 27 40 chr20 54506649 54506766 -17647116 + MIR SINE MIR 38 151 -64 397 270 40 24 chr20 54507084 54507210 -17646672 + MIR SINE MIR 8 135 -127 831 227 62 40 chr20 54507267 54507492 -17646390 - MIR SINE MIR 0 262 33 280 255 96 0 chr20 54507567 54507661 -17646221 - MIR SINE MIR -127 135 33 239 314 16 25 chr20 54509104 54509225 -17644657 - L1MC4a LINE L1 -1875 5933 5814 539 182 0 0 chr20 54509277 54509376 -17644506 - MER21B LTR ERV1 -351 512 414 5658 141 42 17 chr20 54509376 54511068 -17642814 - L1MA8 LINE L1 -22 6269 4532 360 318 92 23 chr20 54511091 54511308 -17642574 - L1MC4a LINE L1 -392 5729 5498 1004 217 136 78 chr20 54511744 54511955 -17641927 - L2 LINE L2 -4 3309 3112 570 195 7 114 chr20 54511955 54512038 -17641844 - MER94 DNA DNA -1 133 71 2091 110 0 7 chr20 54512038 54512328 -17641554 - AluSx SINE Alu -22 290 3 570 195 7 114 chr20 54512328 54512393 -17641489 - MER94 DNA DNA -63 71 1 1004 217 136 78 chr20 54512393 54512435 -17641447 - L2 LINE L2 -201 3112 3074 1318 173 70 30 chr20 54512435 54512735 -17641147 - AluJo SINE Alu 0 312 1 1004 217 136 78 chr20 54512735 54512876 -17641006 - L2 LINE L2 -239 3074 2891 718 234 24 6 chr20 54512869 54513036 -17640846 + MIR SINE MIR 93 262 0 * 244 199 44 44 chr20 54513247 54513350 -17640532 - MLT1I LTR MaLR 0 446 310 848 214 46 13 chr20 54513458 54513653 -17640229 - MLT1J LTR MaLR -313 198 9 518 272 92 71 chr20 54513664 54513759 -17640123 - MLT1L LTR MaLR -12 603 511 2004 128 0 3 chr20 54513759 54514057 -17639825 + AluSq SINE Alu 1 297 -16 518 272 92 71 chr20 54514057 54514354 -17639528 - MLT1L LTR MaLR -104 511 203 310 336 115 0 chr20 54514512 54514634 -17639248 + MIR SINE MIR 107 242 -20 304 339 39 8 chr20 54515059 54515189 -17638693 + L2 LINE L2 2728 2861 -453 1393 144 0 13 chr20 54515205 54515441 -17638441 - AluJo SINE Alu -6 306 74 610 255 165 14 chr20 54515450 54515802 -17638080 - LTR16C LTR ERVL -71 420 5 2089 188 26 70 chr20 54516043 54516103 -17637779 - MLT1D LTR MaLR 0 505 444 1645 148 13 46 chr20 54516103 54516408 -17637474 - AluJb SINE Alu -17 295 1 2089 188 26 70 chr20 54516408 54516628 -17637254 - MLT1D LTR MaLR -61 444 216 2610 136 24 9 chr20 54516628 54517047 -17636835 - MSTB LTR MaLR 0 426 2 2089 188 26 70 chr20 54517047 54517174 -17636708 - MLT1D LTR MaLR -289 216 123 1954 120 0 27 chr20 54517174 54517475 -17636407 - AluSx SINE Alu -19 293 1 2089 188 26 70 chr20 54517475 54517593 -17636289 - MLT1D LTR MaLR -382 123 1 827 304 60 8 chr20 54517602 54517852 -17636030 - MLT1K LTR MaLR -309 279 17 605 308 63 17 chr20 54518305 54518542 -17635340 - MLT1J LTR MaLR -12 499 252 823 191 180 0 chr20 54518622 54518805 -17635077 + MER20 DNA MER1_type 1 216 -3 206 268 18 18 chr20 54518813 54518869 -17635013 + MIR3 SINE MIR 109 164 -44 295 274 40 48 chr20 54519072 54519196 -17634686 - LTR33 LTR ERVL -69 452 330 1349 213 70 82 chr20 54519280 54519848 -17634034 + L2 LINE L2 2777 3311 -2 935 255 167 7 chr20 54519991 54520297 -17633585 + MLT1K LTR MaLR 228 582 -6 1655 159 4 4 chr20 54520888 54521165 -17632717 - AluJb SINE Alu -34 278 2 978 179 17 17 chr20 54521186 54521365 -17632517 - MER58A DNA MER1_type -4 220 42 321 194 0 185 chr20 54521403 54521511 -17632371 + Charlie8 DNA MER1_type 242 2416 -1 364 224 22 142 chr20 54521602 54521717 -17632165 - L2 LINE L2 -6 3307 3220 1681 176 14 10 chr20 54521717 54522012 -17631870 + AluJb SINE Alu 1 296 -16 364 224 22 142 chr20 54522012 54522079 -17631803 - L2 LINE L2 -93 3220 3147 408 245 0 106 chr20 54522079 54522216 -17631666 + L1MA10 LINE L1 6189 6310 -24 2531 132 44 3 chr20 54522216 54522603 -17631279 + MER57A LTR ERV1 1 403 0 408 245 0 106 chr20 54522603 54522616 -17631266 + L1MA10 LINE L1 6310 6323 -11 310 156 0 0 chr20 54522625 54522670 -17631212 - L1MC4 LINE L1 -1339 6703 6659 2146 116 7 0 chr20 54522971 54523281 -17630601 + AluSx SINE Alu 1 312 0 3067 145 9 49 chr20 54523309 54523862 -17630020 - LTR26B LTR ERV1 0 531 1 864 182 18 0 chr20 54523863 54524028 -17629854 + FAM SINE Alu 1 41 -8 2086 131 144 60 chr20 54524299 54524749 -17629133 - LTR54 LTR ERV1 0 510 23 635 119 280 28 chr20 54524755 54524898 -17628984 + MER53 DNA DNA 2 180 -9 2211 189 58 118 chr20 54525133 54525906 -17627976 - LTR8A LTR ERV1 0 727 1 1505 271 41 53 chr20 54526116 54526677 -17627205 - MLT1E LTR MaLR 0 593 40 415 230 45 2 chr20 54526676 54526835 -17627047 - MLT1G LTR MaLR -340 250 23 * 472 268 46 33 chr20 54527144 54527297 -17626585 + L2 LINE L2 2243 2397 -917 180 352 132 0 chr20 54527314 54527405 -17626477 + L2 LINE L2 2533 2635 -679 545 294 163 46 chr20 54527434 54527938 -17625944 + L2 LINE L2 2734 3311 -2 195 207 66 116 chr20 54528847 54528968 -17624914 - L2 LINE L2 -19 3294 3180 817 293 133 28 chr20 54529091 54529616 -17624266 - L2 LINE L2 -20 3293 2710 1937 91 59 0 chr20 54529616 54529902 -17623980 - AluSc SINE Alu -6 303 1 817 293 133 28 chr20 54529902 54529948 -17623934 - L2 LINE L2 -603 2710 2670 507 245 95 0 chr20 54529979 54530126 -17623756 - MIR SINE MIR -89 173 13 209 184 41 0 chr20 54530236 54530285 -17623597 - MIR SINE MIR -77 131 81 186 393 19 0 chr20 54530578 54530685 -17623197 + MIR SINE MIR 154 262 0 742 282 34 5 chr20 54530705 54530914 -17622968 + MIR SINE MIR 28 242 -20 1871 164 6 3 chr20 54531345 54531698 -17622184 - AluSx SINE Alu 0 354 1 180 77 0 0 chr20 54531836 54531862 -17622020 + (TTCA)n Simple_repeat Simple_repeat 3 28 0 916 267 132 12 chr20 54531864 54532431 -17621451 - L2 LINE L2 -9 3304 2670 190 267 79 40 chr20 54532507 54532608 -17621274 - L2 LINE L2 0 3272 3168 300 257 133 76 chr20 54532859 54533206 -17620676 - MLT1K LTR MaLR -109 479 48 486 295 163 13 chr20 54533732 54533959 -17619923 + MIR SINE MIR 2 262 0 216 0 0 0 chr20 54533977 54534001 -17619881 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 181 352 11 34 chr20 54534471 54534559 -17619323 - MIR SINE MIR -99 109 24 * 249 315 0 0 chr20 54534496 54534569 -17619313 + MIR SINE MIR 5 77 -185 1297 159 0 9 chr20 54534572 54534792 -17619090 - AluJo SINE Alu -9 303 86 435 249 121 17 chr20 54534792 54534897 -17618985 + MIR SINE MIR 71 164 -98 2134 107 3 3 chr20 54534897 54535196 -17618686 - AluSx SINE Alu -13 299 1 435 249 121 17 chr20 54535196 54535263 -17618619 + MIR SINE MIR 164 261 -1 605 230 75 30 chr20 54535390 54535451 -17618431 - MER3 DNA MER1_type 0 209 152 207 0 0 0 chr20 54535451 54535474 -17618408 + (TAAAA)n Simple_repeat Simple_repeat 3 25 0 1989 123 7 13 chr20 54535480 54535781 -17618101 + AluSx SINE Alu 1 299 -13 605 230 75 30 chr20 54535781 54535912 -17617970 - MER3 DNA MER1_type -61 148 1 407 259 68 104 chr20 54535960 54536124 -17617758 + L1MEc LINE L1 2404 2531 -4009 2031 128 3 0 chr20 54536124 54536428 -17617454 - AluSx SINE Alu -7 305 1 407 259 68 104 chr20 54536428 54536541 -17617341 + L1MEc LINE L1 2531 2647 -3893 1777 157 13 3 chr20 54536684 54536983 -17616899 + AluJb SINE Alu 2 303 -9 304 268 72 58 chr20 54537040 54537387 -17616495 - L1M4 LINE L1 -2865 3281 2930 1815 164 0 19 chr20 54537513 54537825 -17616057 - AluJo SINE Alu -6 306 1 2326 106 48 28 chr20 54538090 54538447 -17615435 - THE1B LTR MaLR 0 364 1 491 245 48 14 chr20 54538610 54538757 -17615125 - MIR SINE MIR -110 152 1 369 238 68 82 chr20 54538793 54538940 -17614942 - MIR SINE MIR -60 202 58 482 261 188 32 chr20 54539608 54540024 -17613858 - MLT1H LTR MaLR -6 543 1 210 269 30 15 chr20 54540024 54540091 -17613791 - MIR SINE MIR -89 119 52 756 273 31 26 chr20 54540251 54540478 -17613404 - MLT1K LTR MaLR 0 588 361 481 286 76 12 chr20 54540737 54540908 -17612974 + Charlie8 DNA MER1_type 2 183 -2234 288 281 0 0 chr20 54540908 54540972 -17612910 + MIR SINE MIR 110 173 -89 849 183 97 0 chr20 54540974 54541149 -17612733 - LTR47A LTR ERVL 0 452 261 304 315 0 0 chr20 54541401 54541490 -17612392 + MIR SINE MIR 174 262 0 261 209 149 0 chr20 54541526 54541593 -17612289 + Charlie8 DNA MER1_type 189 265 -2152 689 254 103 113 chr20 54541737 54542213 -17611669 - MLT1J LTR MaLR -14 497 27 22 0 0 0 chr20 54542261 54542283 -17611599 + AT_rich Low_complexity Low_complexity 1 22 0 442 274 75 16 chr20 54542323 54542509 -17611373 + L2 LINE L2 2702 2898 -416 528 264 174 0 chr20 54542550 54542717 -17611165 + MIR SINE MIR 65 260 -2 760 284 198 0 chr20 54542726 54543074 -17610808 + L2 LINE L2 2897 3313 0 875 209 3 11 chr20 54543075 54543448 -17610434 + (TGGA)n Simple_repeat Simple_repeat 1 369 0 1043 117 4 16 chr20 54543487 54543735 -17610147 + (TGGA)n Simple_repeat Simple_repeat 1 244 0 486 194 70 31 chr20 54545192 54545321 -17608561 + MER69A DNA AcHobo 35 168 -9 363 304 11 0 chr20 54545359 54545451 -17608431 - MER81 DNA DNA -7 107 15 2268 110 16 7 chr20 54546050 54546359 -17607523 - AluSx SINE Alu 0 312 1 294 164 0 0 chr20 54546810 54546865 -17607017 + GA-rich Low_complexity Low_complexity 2 56 0 211 272 228 22 chr20 54546865 54547001 -17606881 - MIR3 SINE MIR -29 179 16 2298 97 0 44 chr20 54547348 54547668 -17606214 - AluJb SINE Alu -6 306 1 2643 17 40 3 chr20 54548373 54548673 -17605209 - AluY SINE Alu 0 311 1 1268 242 56 65 chr20 54548926 54549465 -17604417 - L2 LINE L2 0 3313 2776 203 269 91 69 chr20 54549549 54549724 -17604158 - L3 LINE CR1 -79 1498 1320 575 205 85 50 chr20 54549872 54550204 -17603678 - MLT1J LTR MaLR -103 408 1 397 251 76 95 chr20 54551085 54551348 -17602534 - L2 LINE L2 0 3313 3056 303 239 34 23 chr20 54551419 54551507 -17602375 + L2 LINE L2 3223 3311 -2 450 296 126 35 chr20 54551612 54551819 -17602063 - L2 LINE L2 -340 2974 2787 2595 119 67 2 chr20 54551819 54552221 -17601661 - MSTA LTR MaLR 0 428 1 450 296 126 35 chr20 54552221 54552409 -17601473 - L2 LINE L2 -527 2787 2543 1793 152 50 0 chr20 54553021 54553298 -17600584 - AluSx SINE Alu -1 311 21 328 338 124 7 chr20 54553386 54553531 -17600351 + MIR3 SINE MIR 41 202 -6 402 326 34 0 chr20 54553564 54553711 -17600171 + MIR SINE MIR 2 153 -109 2606 200 116 50 chr20 54554059 54554979 -17598903 - MER63C DNA MER1_type 0 930 81 724 115 105 115 chr20 54554983 54555192 -17598690 - MER63 DNA MER1_type -854 207 1 554 259 23 115 chr20 54555346 54555689 -17598193 - Charlie8 DNA MER1_type -1027 1390 2 1980 163 3 0 chr20 54555777 54556072 -17597810 + AluSx SINE Alu 1 296 -16 1873 172 10 0 chr20 54556487 54556790 -17597092 - AluJo SINE Alu -6 306 1 269 224 0 0 chr20 54557008 54557075 -17596807 + MER113 DNA MER1_type? 79 145 -376 644 159 76 38 chr20 54557089 54557221 -17596661 - L2 LINE L2 -5 3308 3172 234 231 0 0 chr20 54557227 54557292 -17596590 + GA-rich Low_complexity Low_complexity 1 65 0 733 280 84 44 chr20 54557292 54557794 -17596088 - L2 LINE L2 -124 3189 2680 696 247 156 10 chr20 54557804 54558112 -17595770 + MER113 DNA MER1_type? 167 519 -2 727 324 140 37 chr20 54558281 54558951 -17594931 + L2 LINE L2 690 1428 -1886 660 236 18 6 chr20 54558954 54559119 -17594763 + MLT1J LTR MaLR 20 186 -325 1106 248 83 53 chr20 54559133 54559600 -17594282 + MLT1J LTR MaLR 1 481 -30 789 262 113 28 chr20 54559633 54559915 -17593967 + MLT1J LTR MaLR 206 511 0 308 264 169 14 chr20 54560264 54560412 -17593470 + LTR33 LTR ERVL 12 182 -339 2092 108 4 0 chr20 54560431 54560700 -17593182 + AluSx SINE Alu 14 283 -29 198 0 0 0 chr20 54560700 54560722 -17593160 + (CAAT)n Simple_repeat Simple_repeat 2 23 0 637 253 98 12 chr20 54560779 54560855 -17593027 + MER69 DNA AcHobo 2231 2299 -227 339 96 0 0 chr20 54560855 54560907 -17592975 + (ATG)n Simple_repeat Simple_repeat 2 53 0 637 253 98 12 chr20 54560907 54561075 -17592807 + MER69 DNA AcHobo 2299 2496 -30 1374 219 87 34 chr20 54562030 54562469 -17591413 - MLT1C LTR MaLR 0 467 6 586 278 10 44 chr20 54562852 54563057 -17590825 + MIR SINE MIR 15 212 -50 641 129 10 0 chr20 54564222 54564323 -17589559 - LTR26 LTR ERV1 0 603 502 2038 148 10 0 chr20 54564455 54564752 -17589130 + AluSx SINE Alu 1 300 -12 428 275 63 7 chr20 54564876 54565018 -17588864 - L1ME4a LINE L1 -11 6110 5961 1042 256 80 109 chr20 54565054 54565100 -17588782 + L2 LINE L2 2412 2458 -855 1616 157 0 118 chr20 54565100 54565438 -17588444 + AluJo SINE Alu 1 298 -14 1042 256 80 109 chr20 54565438 54566312 -17587570 + L2 LINE L2 2458 3300 -13 192 77 0 0 chr20 54566312 54566338 -17587544 + (TGAA)n Simple_repeat Simple_repeat 1 26 0 462 231 16 0 chr20 54566674 54566795 -17587087 + Charlie8 DNA MER1_type 35 157 -2260 270 171 0 0 chr20 54566802 54566843 -17587039 + AluJ/FRAM SINE Alu 229 269 -33 2499 90 0 0 chr20 54566980 54567290 -17586592 + AluSx SINE Alu 1 310 -2 22 0 0 0 chr20 54567485 54567507 -17586375 + AT_rich Low_complexity Low_complexity 1 22 0 233 194 130 46 chr20 54567511 54567619 -17586263 - L1ME4a LINE L1 -44 6077 5961 2247 100 123 50 chr20 54569607 54569831 -17584051 - MSTA LTR MaLR 0 428 222 2649 65 0 0 chr20 54569831 54570139 -17583743 - AluSc SINE Alu -1 308 1 2247 100 123 50 chr20 54570139 54570313 -17583569 - MSTA LTR MaLR -206 222 1 427 286 42 83 chr20 54570821 54571038 -17582844 + MLT1K LTR MaLR 166 373 -215 183 320 0 0 chr20 54571046 54571096 -17582786 + L2 LINE L2 3263 3312 -1 311 242 0 0 chr20 54571242 54571308 -17582574 + MER91B DNA MER1_type 1 66 -124 2606 58 0 0 chr20 54572168 54572476 -17581406 + AluSg SINE Alu 1 308 -2 571 292 97 32 chr20 54572618 54572988 -17580894 + MLT1L LTR MaLR 1 394 -221 2305 112 0 6 chr20 54573106 54573420 -17580462 - AluSx SINE Alu 0 312 1 232 205 0 0 chr20 54573544 54573583 -17580299 - MER5A DNA MER1_type -99 90 52 350 353 7 7 chr20 54573647 54573786 -17580096 + MIR SINE MIR 20 158 -104 * 1622 251 122 16 chr20 54573778 54574597 -17579285 + L2 LINE L2 2349 3232 -81 2287 243 30 18 chr20 54574599 54575258 -17578624 - L1ME1 LINE L1 -1 6165 5499 283 257 14 14 chr20 54575259 54575329 -17578553 + L2 LINE L2 3227 3296 -17 241 318 0 11 chr20 54575381 54575469 -17578413 + MIR SINE MIR 149 235 -27 181 254 51 68 chr20 54576138 54576256 -17577626 - MIR SINE MIR -77 131 16 990 227 14 0 chr20 54576383 54576599 -17577283 + MER20 DNA MER1_type 1 219 0 310 261 0 0 chr20 54576606 54576675 -17577207 - MIR SINE MIR -58 150 82 297 284 65 62 chr20 54577057 54577332 -17576550 - L1ME4a LINE L1 -2 6119 5844 2276 166 57 0 chr20 54577386 54577789 -17576093 - MSTB LTR MaLR 0 426 1 1995 121 84 28 chr20 54578256 54578611 -17575271 + THE1C LTR MaLR 1 375 0 1159 276 66 20 chr20 54578955 54579512 -17574370 - L2 LINE L2 0 3313 2734 732 306 92 17 chr20 54579543 54579958 -17573924 - L1MC5 LINE L1 -64 7897 7452 417 242 65 65 chr20 54579989 54580142 -17573740 + L2 LINE L2 3123 3275 -38 504 225 40 26 chr20 54580184 54580335 -17573547 - MIR SINE MIR -107 155 3 267 209 59 105 chr20 54580778 54580931 -17572951 + MER5A DNA MER1_type 16 161 -28 344 286 143 0 chr20 54581381 54581479 -17572403 + L2 LINE L2 3142 3253 -19 246 62 0 0 chr20 54581487 54581519 -17572363 + (TGAA)n Simple_repeat Simple_repeat 3 34 0 698 249 46 25 chr20 54581875 54582116 -17571766 + MER112 DNA MER1_type 6 251 -9 288 298 58 33 chr20 54582120 54582241 -17571641 - MIR3 SINE MIR -53 155 32 719 245 38 72 chr20 54582347 54582612 -17571270 + L2 LINE L2 3052 3307 -6 852 197 39 34 chr20 54582905 54583113 -17570769 + MER3 DNA MER1_type 1 209 0 280 319 68 58 chr20 54583558 54583765 -17570117 - L2 LINE L2 -249 3064 2856 630 276 209 34 chr20 54584726 54585113 -17568769 + L2 LINE L2 2853 3307 -6 314 290 59 12 chr20 54585671 54585840 -17568042 - L1ME4a LINE L1 -251 5870 5694 408 275 111 41 chr20 54586266 54586437 -17567445 - MIR SINE MIR -33 229 47 425 269 103 35 chr20 54586701 54587089 -17566793 + LTR33 LTR ERVL 33 519 -2 226 222 37 0 chr20 54587433 54587487 -17566395 + Charlie8 DNA MER1_type 2357 2412 -5 540 201 201 0 chr20 54588467 54588601 -17565281 + MER5A DNA MER1_type 4 164 -25 1827 138 29 7 chr20 54588653 54588956 -17564926 - AluJb SINE Alu 0 309 1 1075 274 89 67 chr20 54588957 54589076 -17564806 - L2 LINE L2 -8 3305 3190 2478 107 55 0 chr20 54589076 54589421 -17564461 - THE1B LTR MaLR 0 364 1 1075 274 89 67 chr20 54589421 54589827 -17564055 - L2 LINE L2 -123 3190 2767 376 278 251 22 chr20 54589960 54590183 -17563699 + L2 LINE L2 2999 3272 0 934 202 31 0 chr20 54590643 54590836 -17563046 + MER20 DNA MER1_type 1 199 -20 580 179 57 29 chr20 54590835 54590975 -17562907 - MER106B DNA MER1_type -20 1039 896 * 2172 117 14 0 chr20 54590979 54591269 -17562613 + AluSx SINE Alu 1 294 -18 2110 132 51 67 chr20 54591280 54591728 -17562154 + L1MB3 LINE L1 5743 6183 0 246 231 0 0 chr20 54591745 54591797 -17562085 - MER106A DNA MER1_type -182 54 3 1488 186 47 0 chr20 54592038 54592296 -17561586 + AluJo SINE Alu 1 270 -42 1293 168 13 4 chr20 54592296 54592522 -17561360 + MER50 LTR ERV1 3 230 -504 * 1648 136 0 8 chr20 54592519 54592784 -17561098 + MER50 LTR ERV1 435 697 -37 2074 151 0 0 chr20 54593588 54593886 -17559996 - AluJo SINE Alu -14 298 1 308 297 22 108 chr20 54594281 54594503 -17559379 + L1MC4a LINE L1 5817 6019 -1789 196 361 32 38 chr20 54595035 54595193 -17558689 - L2 LINE L2 -360 2954 2798 1012 260 123 31 chr20 54595201 54595308 -17558574 - L2 LINE L2 -463 2851 2755 207 0 0 0 chr20 54595308 54595331 -17558551 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1805 140 14 25 chr20 54595334 54595619 -17558263 - AluJo SINE Alu -30 282 1 1012 260 123 31 chr20 54595619 54595857 -17558025 - L2 LINE L2 -560 2754 2470 257 264 167 42 chr20 54596641 54596785 -17557097 - MIR SINE MIR -12 250 89 848 226 42 32 chr20 54596810 54597027 -17556855 - MER20 DNA MER1_type 0 219 1 293 333 82 7 chr20 54597077 54597212 -17556670 + MIR3 SINE MIR 14 158 -50 618 14 0 0 chr20 54597833 54597904 -17555978 + (GAAA)n Simple_repeat Simple_repeat 4 74 0 869 206 148 0 chr20 54597926 54598135 -17555747 - MIR SINE MIR -12 250 11 248 240 0 0 chr20 54598538 54598588 -17555294 + L2 LINE L2 3210 3259 -13 351 276 138 0 chr20 54598756 54598872 -17555010 + MIR3 SINE MIR 70 201 -7 1369 82 121 10 chr20 54598959 54599166 -17554716 - MER30 DNA MER1_type 0 230 1 271 273 180 29 chr20 54599602 54599741 -17554141 - MIR SINE MIR -47 215 56 657 161 140 78 chr20 54599791 54599941 -17553941 - MER115 DNA AcHobo -15 678 512 2210 130 3 0 chr20 54599941 54600248 -17553634 + AluSx SINE Alu 1 308 -4 657 161 140 78 chr20 54600248 54600290 -17553592 - MER115 DNA AcHobo -181 512 474 268 233 111 0 chr20 54600312 54600402 -17553480 + MLT1K LTR MaLR 488 587 -1 2740 104 10 0 chr20 54600512 54600905 -17552977 - MER1A DNA MER1_type 0 529 133 290 306 213 9 chr20 54601104 54601212 -17552670 - MIR3 SINE MIR -11 197 68 868 182 15 66 chr20 54601293 54601476 -17552406 + MER58A DNA MER1_type 37 211 -2209 2467 71 0 3 chr20 54601476 54601771 -17552111 + AluSq SINE Alu 1 294 -19 868 182 15 66 chr20 54601771 54601785 -17552097 + MER58A DNA MER1_type 211 224 0 499 246 20 97 chr20 54602351 54602599 -17551283 + L2 LINE L2 2545 2773 -541 182 371 45 23 chr20 54602599 54602731 -17551151 + L2 LINE L2 2748 2882 -432 1624 127 131 4 chr20 54602779 54603039 -17550843 - AluSx SINE Alu -19 293 1 1203 287 66 37 chr20 54603925 54604413 -17549469 + L2 LINE L2 2806 3307 -6 1768 100 0 0 chr20 54604463 54604714 -17549168 + AluSg/x SINE Alu 66 316 0 501 254 28 7 chr20 54605017 54605159 -17548723 - MIR SINE MIR -70 192 48 2066 101 66 0 chr20 54605629 54605916 -17547966 + AluSx SINE Alu 1 306 -6 238 279 168 35 chr20 54605949 54606291 -17547591 + L2 LINE L2 2848 3311 -2 301 270 14 0 chr20 54606301 54606375 -17547507 - MIR SINE MIR -60 148 74 1159 208 100 62 chr20 54606392 54606781 -17547101 - MLT1C LTR MaLR -13 454 51 204 67 22 44 chr20 54607268 54607313 -17546569 + (TG)n Simple_repeat Simple_repeat 2 45 0 183 186 0 0 chr20 54607437 54607480 -17546402 + (TG)n Simple_repeat Simple_repeat 1 43 0 448 244 25 0 chr20 54607583 54608034 -17545848 + (TG)n Simple_repeat Simple_repeat 1 462 0 232 237 29 0 chr20 54608047 54608220 -17545662 + (TG)n Simple_repeat Simple_repeat 2 179 0 413 271 32 46 chr20 54608327 54608545 -17545337 + L2 LINE L2 2757 2971 -343 201 237 68 0 chr20 54608754 54608813 -17545069 - MIR3 SINE MIR -14 194 132 731 267 90 62 chr20 54608839 54609195 -17544687 - MLT1K LTR MaLR -15 573 208 2616 144 19 5 chr20 54609498 54609920 -17543962 - MSTA LTR MaLR 0 428 1 864 162 11 50 chr20 54610082 54610261 -17543621 + L1MB4 LINE L1 6001 6172 -8 228 200 33 0 chr20 54610286 54610346 -17543536 + MLT1K LTR MaLR 511 572 -16 225 154 0 0 chr20 54611156 54611195 -17542687 + (TTCA)n Simple_repeat Simple_repeat 3 41 0 612 246 98 28 chr20 54611225 54611510 -17542372 + L2 LINE L2 2887 3191 -122 1166 224 85 58 chr20 54611614 54612060 -17541822 - LTR16C LTR ERVL 0 491 34 294 329 166 53 chr20 54612121 54612477 -17541405 - L2 LINE L2 0 3313 2918 581 281 86 32 chr20 54612513 54612951 -17540931 + L2 LINE L2 2271 3312 -1 274 273 40 20 chr20 54613374 54613473 -17540409 + MLT1E LTR MaLR 41 141 -452 525 206 10 0 chr20 54613628 54613730 -17540152 + MLT1E LTR MaLR 489 591 -2 229 156 10 73 chr20 54613772 54613835 -17540047 + (CATATA)n Simple_repeat Simple_repeat 2 60 -31 1736 159 44 0 chr20 54613835 54614125 -17539757 + AluJo SINE Alu 1 302 0 229 156 10 73 chr20 54614125 54614156 -17539726 + (CATATA)n Simple_repeat Simple_repeat 60 91 0 399 257 45 5 chr20 54614230 54614375 -17539507 + MER20B DNA MER1_type 64 216 -3 706 275 104 13 chr20 54614381 54614679 -17539203 - Charlie7 DNA MER1_type -2245 367 43 1154 186 33 14 chr20 54614775 54614990 -17538892 + MER20 DNA MER1_type 1 219 0 2204 73 0 60 chr20 54615055 54615356 -17538526 - AluY SINE Alu -12 299 17 272 244 151 0 chr20 54615372 54615458 -17538424 - MLT1L LTR MaLR -206 409 311 204 217 0 0 chr20 54615470 54615516 -17538366 + CT-rich Low_complexity Low_complexity 3 48 0 325 119 36 95 chr20 54615646 54615730 -17538152 - MLT1L LTR MaLR -534 81 3 1340 313 69 34 chr20 54616516 54616624 -17537258 + L2 LINE L2 2430 2533 -780 1982 167 6 6 chr20 54616624 54616936 -17536946 + AluJo SINE Alu 1 312 0 1340 313 69 34 chr20 54616936 54617681 -17536201 + L2 LINE L2 2533 3312 -1 367 345 5 20 chr20 54618031 54618228 -17535654 + L1ME LINE L1 5630 5823 -298 559 220 153 30 chr20 54618272 54618589 -17535293 - L2 LINE L2 -18 3295 65 356 204 23 0 chr20 54618887 54618975 -17534907 + LTR33 LTR ERVL 425 514 -7 270 400 16 8 chr20 54619651 54619776 -17534106 - MIR SINE MIR -21 241 116 533 352 35 4 chr20 54619906 54620133 -17533749 + MIR SINE MIR 8 241 -21 380 269 119 23 chr20 54620369 54620644 -17533238 + MLT1L LTR MaLR 224 615 0 260 301 142 45 chr20 54620943 54621302 -17532580 - L1ME2 LINE L1 -236 5928 5535 529 258 40 27 chr20 54621667 54622147 -17531735 + MLT1K LTR MaLR 2 557 -31 781 281 186 38 chr20 54622323 54622747 -17531135 + L2 LINE L2 2826 3312 -1 258 198 0 31 chr20 54622776 54622872 -17531010 + GA-rich Low_complexity Low_complexity 3 95 0 499 163 189 21 chr20 54623266 54623456 -17530426 - MER69 DNA AcHobo -1 2525 2304 380 168 17 101 chr20 54623475 54623511 -17530371 + MER69 DNA AcHobo 1947 1984 -542 2141 116 0 13 chr20 54623511 54623812 -17530070 + AluSx SINE Alu 16 312 0 380 168 17 101 chr20 54623812 54623894 -17529988 + MER69 DNA AcHobo 1984 2055 -471 336 150 195 62 chr20 54623887 54624000 -17529882 - MER69 DNA AcHobo -246 2280 2153 * 194 91 30 0 chr20 54624000 54624033 -17529849 + A-rich Low_complexity Low_complexity 3 36 0 1990 148 46 22 chr20 54624069 54624440 -17529442 - MLT1B LTR MaLR -10 380 1 647 262 0 6 chr20 54624445 54624609 -17529273 - MER69 DNA AcHobo -447 2079 1917 495 305 61 9 chr20 54624630 54624843 -17529039 - MER69 DNA AcHobo -820 406 183 806 173 10 114 chr20 54624964 54625166 -17528716 - MER69 DNA AcHobo -2343 183 3 1245 249 55 30 chr20 54625299 54625734 -17528148 - MLT1C LTR MaLR -21 605 1 438 242 16 23 chr20 54626184 54626312 -17527570 - MIR SINE MIR -73 189 63 203 284 15 15 chr20 54626378 54626445 -17527437 + G-rich Low_complexity Low_complexity 2 68 0 346 222 62 0 chr20 54626909 54626990 -17526892 - L2 LINE L2 -34 3279 3194 368 215 9 75 chr20 54627001 54627108 -17526774 - MLT1J2 LTR MaLR -8 442 343 679 245 94 8 chr20 54627176 54627421 -17526461 - Charlie4a DNA MER1_type -6 502 237 808 228 64 20 chr20 54627425 54627627 -17526255 + MER58A DNA MER1_type 5 215 -9 821 231 19 19 chr20 54627639 54627851 -17526031 - Charlie4a DNA MER1_type -276 232 21 2230 119 7 0 chr20 54627915 54628225 -17525657 + AluSx SINE Alu 1 312 0 697 259 60 5 chr20 54628248 54628449 -17525433 - MLT1J2 LTR MaLR -188 262 51 449 340 88 0 chr20 54628470 54628708 -17525174 - L2 LINE L2 -137 3176 2918 568 231 58 32 chr20 54628742 54628898 -17524984 + L2 LINE L2 3147 3306 -7 435 283 68 45 chr20 54628929 54629106 -17524776 - L2 LINE L2 -453 2861 2681 613 39 0 13 chr20 54629583 54629661 -17524221 - MADE1 DNA Mariner 0 80 4 28 48 0 0 chr20 54630064 54630106 -17523776 + GC_rich Low_complexity Low_complexity 1 42 0 917 143 0 0 chr20 54630698 54630838 -17523044 - AluJ SINE Alu -8 304 165 822 146 0 0 chr20 54630838 54630961 -17522921 - AluJ SINE Alu -181 131 9 425 302 135 16 chr20 54630993 54631185 -17522697 + MIR SINE MIR 48 262 0 313 305 26 40 chr20 54631185 54631336 -17522546 - L1ME4a LINE L1 -7 6114 5966 2314 85 48 0 chr20 54631346 54631640 -17522242 - AluSx SINE Alu -4 308 1 503 276 15 8 chr20 54631728 54631862 -17522020 + MIR SINE MIR 3 137 -125 306 310 106 9 chr20 54631929 54632042 -17521840 - L1ME4a LINE L1 -211 5910 5787 1102 154 41 14 chr20 54632196 54632417 -17521465 - MER96B DNA MER1_type? 0 417 191 965 142 0 0 chr20 54632690 54632831 -17521051 + FRAM SINE Alu 1 139 -37 215 272 109 104 chr20 54732836 54733038 -17420844 + L2 LINE L2 2584 2786 -528 636 226 124 32 chr20 54733117 54733303 -17420579 + MIR SINE MIR 36 238 -24 202 244 12 58 chr20 54733329 54733415 -17420467 + L2 LINE L2 2992 3073 -199 2390 75 7 3 chr20 54733419 54733713 -17420169 + AluSq SINE Alu 1 295 -18 1983 149 10 0 chr20 54733800 54734096 -17419786 - AluJb SINE Alu -12 300 2 210 167 273 15 chr20 54734130 54734196 -17419686 + L2 LINE L2 3182 3264 -8 2621 56 0 7 chr20 54734284 54734589 -17419293 + AluY SINE Alu 1 303 -8 536 149 0 11 chr20 54735051 54735145 -17418737 + MER53 DNA DNA 1 93 -96 1858 171 3 3 chr20 54735355 54735654 -17418228 + AluJo SINE Alu 4 302 -10 239 281 73 31 chr20 54735909 54736005 -17417877 + L2 LINE L2 3154 3253 -19 2163 140 0 0 chr20 54736016 54736316 -17417566 + AluSx SINE Alu 1 300 -12 423 52 0 0 chr20 54736392 54736450 -17417432 + (TC)n Simple_repeat Simple_repeat 1 58 0 303 189 0 0 chr20 54737273 54737326 -17416556 + L2 LINE L2 3016 3068 -245 2195 115 3 0 chr20 54737423 54737757 -17416125 - AluSp SINE Alu 0 313 1 24 0 0 0 chr20 54737757 54737781 -17416101 + AT_rich Low_complexity Low_complexity 1 24 0 2114 130 3 0 chr20 54737781 54738074 -17415808 - AluSx SINE Alu -18 294 1 1897 160 0 7 chr20 54738074 54738368 -17415514 - AluSx SINE Alu -20 292 1 224 283 22 11 chr20 54738431 54738523 -17415359 + L2 LINE L2 3194 3286 -27 194 0 0 37 chr20 54738550 54738564 -17415318 + (GAA)n Simple_repeat Simple_repeat 2 16 -11 2584 75 0 0 chr20 54738564 54738871 -17415011 + AluSc SINE Alu 1 307 -2 194 0 0 37 chr20 54738871 54738883 -17414999 + (GAA)n Simple_repeat Simple_repeat 16 27 0 548 206 63 0 chr20 54738966 54739092 -17414790 + L2 LINE L2 2935 3068 -245 870 177 0 59 chr20 54739130 54739219 -17414663 + MLT1B LTR MaLR 2 76 -314 2437 91 0 0 chr20 54739219 54739516 -17414366 - AluY SINE Alu -14 297 1 870 177 0 59 chr20 54739516 54739612 -17414270 + MLT1B LTR MaLR 76 176 -214 2045 137 41 0 chr20 54739616 54739908 -17413974 + AluSx SINE Alu 1 304 -8 1493 166 48 86 chr20 54739908 54740003 -17413879 + MLT1C LTR MaLR 86 183 -284 1895 139 54 0 chr20 54740003 54740298 -17413584 + AluJb SINE Alu 1 311 -1 1425 186 102 11 chr20 54740302 54740577 -17413305 + AluJo SINE Alu 1 300 -12 1493 166 48 86 chr20 54740577 54740588 -17413294 + MLT1C LTR MaLR 186 196 -271 2094 136 0 37 chr20 54740588 54740872 -17413010 + AluSx SINE Alu 1 273 -39 237 65 0 0 chr20 54740872 54740903 -17412979 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2094 136 0 37 chr20 54740903 54740942 -17412940 + AluSx SINE Alu 273 312 0 1493 166 48 86 chr20 54740942 54741226 -17412656 + MLT1C LTR MaLR 196 467 0 204 176 39 20 chr20 54741384 54741435 -17412447 - L2 LINE L2 0 3313 3262 442 104 0 0 chr20 54741437 54741504 -17412378 - AluSx SINE Alu -5 306 240 1481 94 5 20 chr20 54741505 54741707 -17412175 - AluSx SINE Alu -113 199 1 207 277 15 15 chr20 54741710 54741775 -17412107 - L2 LINE L2 -95 3218 3154 830 273 87 44 chr20 54741788 54742012 -17411870 - L2 LINE L2 -126 3187 2974 735 163 148 69 chr20 54742012 54742166 -17411716 + MER20 DNA MER1_type 1 176 -43 2528 91 0 0 chr20 54742166 54742475 -17411407 + AluSg SINE Alu 1 309 -1 735 163 148 69 chr20 54742475 54742522 -17411360 + MER20 DNA MER1_type 176 218 -1 830 273 87 44 chr20 54742522 54743004 -17410878 - L2 LINE L2 -339 2974 2444 2118 106 22 0 chr20 54743007 54743309 -17410573 - AluSx SINE Alu 0 311 4 1368 158 13 18 chr20 54743324 54743552 -17410330 - AluJo SINE Alu -53 259 33 972 236 108 14 chr20 54743554 54743905 -17409977 - L2 LINE L2 -855 2459 2076 2276 113 0 7 chr20 54743905 54744215 -17409667 + AluSx SINE Alu 1 308 -4 211 219 151 0 chr20 54744256 54744329 -17409553 + MIR SINE MIR 49 132 -130 2295 104 0 3 chr20 54744682 54744980 -17408902 + AluSg SINE Alu 1 297 -13 1410 61 0 0 chr20 54744980 54745144 -17408738 + AluSg/x SINE Alu 132 295 -15 811 194 6 35 chr20 54745156 54745326 -17408556 + FRAM SINE Alu 1 165 -1 2499 74 10 0 chr20 54745326 54745623 -17408259 + AluSx SINE Alu 1 300 -12 416 202 0 79 chr20 54745641 54745691 -17408191 - MER5B DNA MER1_type -73 105 67 2219 129 0 6 chr20 54745691 54746002 -17407880 - AluSx SINE Alu -1 311 3 416 202 0 79 chr20 54746002 54746065 -17407817 - MER5B DNA MER1_type -111 67 1 1141 117 19 0 chr20 54746108 54746270 -17407612 + AluSg/x SINE Alu 134 298 -14 1244 224 131 13 chr20 54746419 54746911 -17406971 - MER39 LTR ERV1 0 707 1 432 217 125 17 chr20 54746934 54747054 -17406828 - MER5A DNA MER1_type -10 179 47 1748 118 26 109 chr20 54747073 54747412 -17406470 - AluYb8 SINE Alu -6 312 2 341 135 27 144 chr20 54747422 54747533 -17406349 - MER5A DNA MER1_type -88 101 4 208 316 87 17 chr20 54747624 54747756 -17406126 - MIR SINE MIR -67 141 45 2165 109 30 3 chr20 54748242 54748544 -17405338 - AluSq SINE Alu -2 311 2 323 302 125 0 chr20 54748645 54748741 -17405141 - L2 LINE L2 -2 3270 3163 437 279 70 31 chr20 54748830 54748959 -17404923 - L2 LINE L2 -279 3034 2901 2514 56 0 7 chr20 54748959 54749261 -17404621 - AluY SINE Alu -11 300 1 28 0 0 0 chr20 54749261 54749289 -17404593 + AT_rich Low_complexity Low_complexity 1 28 0 2001 135 44 0 chr20 54749290 54749586 -17404296 + AluSq SINE Alu 1 309 -4 1844 94 91 0 chr20 54749592 54749846 -17404036 + AluSg SINE Alu 2 278 -32 1163 197 120 31 chr20 54749868 54750127 -17403755 - AluJo SINE Alu -30 282 1 902 150 0 0 chr20 54750230 54750363 -17403519 - FLAM_C SINE Alu 0 133 1 495 118 26 0 chr20 54750379 54750455 -17403427 - AluSg/x SINE Alu -17 293 216 2258 105 0 7 chr20 54750467 54750763 -17403119 + AluSq SINE Alu 1 294 -19 1746 157 0 11 chr20 54750771 54751051 -17402831 + AluJb SINE Alu 1 277 -35 * 2356 66 28 0 chr20 54751049 54751336 -17402546 + AluY SINE Alu 16 310 -1 240 35 0 0 chr20 54751351 54751380 -17402502 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 319 286 18 27 chr20 54751398 54751510 -17402372 - L2 LINE L2 -1460 1854 1744 2146 89 60 3 chr20 54751564 54751846 -17402036 + AluSx SINE Alu 2 299 -13 536 272 325 39 chr20 54751865 54752358 -17401524 + L2 LINE L2 2116 2467 -847 2592 68 0 3 chr20 54752358 54752668 -17401214 + AluY SINE Alu 1 309 -2 1574 127 59 108 chr20 54752673 54752811 -17401071 - AluJo SINE Alu -20 292 149 2306 109 3 7 chr20 54752811 54753113 -17400769 - AluSx SINE Alu -11 301 1 1574 127 59 108 chr20 54753113 54753134 -17400748 - AluJo SINE Alu -163 149 129 2182 110 7 0 chr20 54753134 54753437 -17400445 - AluSg SINE Alu 0 305 1 1574 127 59 108 chr20 54753437 54753582 -17400300 - AluJo SINE Alu -183 129 1 536 272 325 39 chr20 54753582 54753667 -17400215 + L2 LINE L2 2469 2867 -447 348 172 75 32 chr20 54753879 54753972 -17399910 - MLT1J LTR MaLR -334 177 81 3011 6 0 0 chr20 54754058 54754375 -17399507 - AluYb8 SINE Alu -1 317 1 2400 58 3 14 chr20 54754383 54754677 -17399205 - AluY SINE Alu -20 291 1 2356 102 0 0 chr20 54754809 54755103 -17398779 - AluSx SINE Alu -18 294 1 1628 128 15 51 chr20 54755343 54755616 -17398266 - AluJo SINE Alu -10 302 40 986 266 75 20 chr20 54755658 54756007 -17397875 - MLT1J LTR MaLR -63 448 81 1148 239 96 79 chr20 54756432 54756940 -17396942 + MLT1K LTR MaLR 3 524 -64 2064 150 3 0 chr20 54756940 54757234 -17396648 - AluSx SINE Alu -17 295 1 1148 239 96 79 chr20 54757234 54757297 -17396585 + MLT1K LTR MaLR 524 584 -4 571 100 0 0 chr20 54757362 54757452 -17396430 - MER83B LTR ERV1 -66 312 223 1232 111 0 6 chr20 54757682 54757844 -17396038 - AluSq SINE Alu -152 161 1 2133 147 0 0 chr20 54757857 54758150 -17395732 - AluSq SINE Alu -20 293 1 24 32 0 0 chr20 54758326 54758357 -17395525 + AT_rich Low_complexity Low_complexity 1 31 0 2036 133 7 0 chr20 54758424 54758736 -17395146 + AluSx SINE Alu 3 316 0 2361 98 0 0 chr20 54758806 54759103 -17394779 - AluSq SINE Alu -16 297 1 1392 162 5 0 chr20 54759110 54759320 -17394562 - AluJb SINE Alu -16 296 86 2452 72 3 0 chr20 54759330 54759621 -17394261 - AluSp SINE Alu -19 294 3 2240 94 3 3 chr20 54759643 54759930 -17393952 - AluSx SINE Alu -22 290 4 1836 154 10 0 chr20 54760033 54760326 -17393556 + AluJb SINE Alu 1 296 -16 1604 159 20 0 chr20 54760495 54760746 -17393136 + AluJo SINE Alu 1 256 -56 191 43 65 22 chr20 54760815 54760861 -17393021 + A-rich Low_complexity Low_complexity 2 49 0 277 256 113 62 chr20 54760958 54761118 -17392764 - MLT1L LTR MaLR -207 408 241 2270 91 3 52 chr20 54761191 54761520 -17392362 + AluSq SINE Alu 1 313 0 749 146 118 7 chr20 54761841 54761985 -17391897 + L1MB5 LINE L1 6012 6171 -3 182 114 0 29 chr20 54761986 54762021 -17391861 + (GGGAGA)n Simple_repeat Simple_repeat 5 38 0 2271 101 0 7 chr20 54762114 54762411 -17391471 - AluSq SINE Alu -18 295 1 2231 103 0 3 chr20 54762425 54762725 -17391157 - AluSq SINE Alu -13 300 2 323 263 30 0 chr20 54763065 54763144 -17390738 + (TATG)n Simple_repeat Simple_repeat 3 87 -17 2116 124 16 0 chr20 54763144 54763450 -17390432 - AluSx SINE Alu -1 311 1 323 263 30 0 chr20 54763450 54763469 -17390413 + (TATG)n Simple_repeat Simple_repeat 87 104 0 2273 115 0 10 chr20 54763611 54763923 -17389959 + AluSq SINE Alu 1 309 -4 547 205 76 34 chr20 54764540 54764805 -17389077 + MLT1K LTR MaLR 146 470 -118 2397 72 0 13 chr20 54764846 54765151 -17388731 - AluY SINE Alu -10 301 1 1886 148 21 0 chr20 54765151 54765441 -17388441 - AluJb SINE Alu -16 296 1 1891 153 0 29 chr20 54765522 54765666 -17388216 + AluJo SINE Alu 1 148 -164 2269 90 0 17 chr20 54765666 54765965 -17387917 + AluSx SINE Alu 2 295 -17 1891 153 0 29 chr20 54765965 54766127 -17387755 + AluJo SINE Alu 148 298 -14 2527 68 3 0 chr20 54766160 54766469 -17387413 - AluY SINE Alu -1 310 1 237 305 61 0 chr20 54766469 54766551 -17387331 - L2 LINE L2 -2 3311 3225 466 234 9 147 chr20 54766555 54766666 -17387216 + MLT1J LTR MaLR 1 126 -385 2130 124 7 0 chr20 54766666 54766964 -17386918 - AluSx SINE Alu -12 300 1 466 234 9 147 chr20 54766964 54766983 -17386899 + MLT1J LTR MaLR 126 146 -365 2215 108 26 10 chr20 54766983 54767290 -17386592 - AluSx SINE Alu 0 312 1 466 234 9 147 chr20 54767290 54767389 -17386493 + MLT1J LTR MaLR 146 199 -312 379 298 8 46 chr20 54767445 54767576 -17386306 + MLT1J LTR MaLR 208 333 -178 2385 86 3 0 chr20 54767837 54768128 -17385754 + AluSp SINE Alu 1 292 -21 790 203 0 0 chr20 54768258 54768396 -17385486 + AluJb SINE Alu 136 273 -39 450 0 0 0 chr20 54768397 54768447 -17385435 + (CA)n Simple_repeat Simple_repeat 2 51 0 483 250 0 18 chr20 54768508 54768620 -17385262 - L2 LINE L2 0 3313 3204 1171 236 64 31 chr20 54768667 54769056 -17384826 - MLT1L LTR MaLR -70 545 144 2216 97 11 0 chr20 54769077 54769390 -17384492 + AluSx SINE Alu 1 316 0 770 166 88 0 chr20 54769404 54769597 -17384285 - Charlie1 DNA MER1_type -50 2711 2502 1409 178 8 8 chr20 54769598 54769873 -17384009 - AluJo SINE Alu 0 309 35 722 193 30 12 chr20 54769875 54770041 -17383841 - Charlie1 DNA MER1_type -249 2512 2344 1417 152 33 25 chr20 54770128 54770200 -17383682 + AluJo SINE Alu 56 126 -186 2224 122 6 10 chr20 54770200 54770511 -17383371 + AluSx SINE Alu 1 310 -2 1417 152 33 25 chr20 54770511 54770682 -17383200 + AluJo SINE Alu 126 301 -11 317 230 0 23 chr20 54770741 54770828 -17383054 - MLT1L LTR MaLR -504 111 27 * 338 221 0 13 chr20 54770825 54770902 -17382980 - MLT1L LTR MaLR -538 77 2 1105 181 36 20 chr20 54770920 54771168 -17382714 + MER112 DNA MER1_type 5 256 0 1853 113 95 3 chr20 54771380 54771664 -17382218 + AluSx SINE Alu 1 310 -2 254 333 28 79 chr20 54771914 54771939 -17381943 - MLT1K LTR MaLR -419 169 144 2337 100 7 0 chr20 54771939 54772238 -17381644 - AluSg SINE Alu -9 301 1 254 333 28 79 chr20 54772238 54772389 -17381493 - MLT1K LTR MaLR -444 144 2 277 211 158 32 chr20 54772396 54772491 -17381391 + L2 LINE L2 3160 3266 -6 1829 174 27 0 chr20 54772563 54772857 -17381025 + AluJo SINE Alu 5 306 -6 430 225 0 73 chr20 54772857 54772900 -17380982 + L1M4 LINE L1 4785 4830 -1316 2530 67 3 6 chr20 54772900 54773212 -17380670 + AluY SINE Alu 1 311 0 430 225 0 73 chr20 54773212 54773319 -17380563 + L1M4 LINE L1 4830 4924 -1222 802 130 17 0 chr20 54773319 54773434 -17380448 + AluJb SINE Alu 1 117 -195 180 0 0 0 chr20 54773437 54773457 -17380425 + (TAAA)n Simple_repeat Simple_repeat 1 20 0 2177 104 30 3 chr20 54773498 54773797 -17380085 - AluSg SINE Alu -3 307 1 1801 90 27 136 chr20 54773822 54774154 -17379728 + AluSq SINE Alu 1 296 -17 311 336 82 0 chr20 54774154 54774300 -17379582 + MLT1K LTR MaLR 179 336 -252 2220 109 0 0 chr20 54774542 54774860 -17379022 + AluSx SINE Alu 1 318 0 2655 49 0 13 chr20 54775344 54775651 -17378231 - AluY SINE Alu -8 303 1 284 341 16 24 chr20 54775759 54775882 -17378000 - LTR16C LTR ERVL -224 267 146 1031 175 9 58 chr20 54775926 54776149 -17377733 + AluJo SINE Alu 86 297 -15 2137 138 0 0 chr20 54776150 54776446 -17377436 + AluSx SINE Alu 1 296 -16 688 215 15 0 chr20 54776446 54776576 -17377306 + AluSg/x SINE Alu 178 309 -3 439 285 148 49 chr20 54776827 54776998 -17376884 - MLT1K LTR MaLR -240 348 195 636 242 51 74 chr20 54776998 54777213 -17376669 + MER63A DNA MER1_type 1 210 0 439 285 148 49 chr20 54777213 54777346 -17376536 - MLT1K LTR MaLR -393 195 14 21 0 0 0 chr20 54777442 54777463 -17376419 + AT_rich Low_complexity Low_complexity 1 21 0 1625 146 3 63 chr20 54777465 54777793 -17376089 - AluJb SINE Alu 0 310 1 976 196 22 61 chr20 54777832 54777880 -17376002 + MER58A DNA MER1_type 5 53 -2367 2201 103 0 14 chr20 54777880 54778225 -17375657 - AluSx SINE Alu 0 312 1 976 196 22 61 chr20 54778225 54778405 -17375477 + MER58A DNA MER1_type 53 224 0 2212 133 0 0 chr20 54778471 54778772 -17375110 + AluSx SINE Alu 1 301 -11 252 0 0 0 chr20 54778877 54778905 -17374977 + (CAAAAA)n Simple_repeat Simple_repeat 3 30 0 354 284 197 16 chr20 54779151 54779334 -17374548 + L2 LINE L2 2717 2932 -382 426 191 32 11 chr20 54779340 54779434 -17374448 - MLT1K LTR MaLR -4 584 489 2369 57 7 4 chr20 54779440 54779719 -17374163 + AluSq SINE Alu 1 280 -33 742 106 35 0 chr20 54779721 54779862 -17374020 + GA-rich Low_complexity Low_complexity 3 148 0 240 35 0 0 chr20 54779864 54779893 -17373989 + (GAAAA)n Simple_repeat Simple_repeat 1 29 0 556 283 62 81 chr20 54779945 54780099 -17373783 - MLT1K LTR MaLR -172 416 261 2258 103 3 13 chr20 54780099 54780401 -17373481 + AluSc SINE Alu 1 299 -10 556 283 62 81 chr20 54780401 54780568 -17373314 - MLT1K LTR MaLR -327 261 101 1315 142 26 0 chr20 54780764 54780954 -17372928 + AluJo SINE Alu 34 228 -84 592 136 80 80 chr20 54781102 54781227 -17372655 - MER63 DNA MER1_type -311 751 1 1939 141 20 7 chr20 54781301 54781598 -17372284 + AluJb SINE Alu 1 301 -11 479 93 0 13 chr20 54781598 54781673 -17372209 + (GGAA)n Simple_repeat Simple_repeat 1 74 0 210 71 0 0 chr20 54782524 54782552 -17371330 + (TCCC)n Simple_repeat Simple_repeat 2 29 0 1782 125 6 61 chr20 54782552 54782757 -17371125 - AluJo SINE Alu 0 302 153 2424 76 0 29 chr20 54782757 54782931 -17370951 - AluSx SINE Alu -5 307 144 2316 104 0 3 chr20 54782931 54783229 -17370653 - AluSg SINE Alu -12 298 2 2424 76 0 29 chr20 54783229 54783370 -17370512 - AluSx SINE Alu -168 144 1 1782 125 6 61 chr20 54783370 54783514 -17370368 - AluJo SINE Alu -149 153 3 1871 149 0 67 chr20 54784149 54784254 -17369628 + AluJb SINE Alu 9 119 -193 2148 134 0 3 chr20 54784254 54784560 -17369322 - AluSx SINE Alu -7 305 1 1871 149 0 67 chr20 54784560 54784769 -17369113 + AluJb SINE Alu 119 302 -10 31 19 0 38 chr20 54785195 54785224 -17368658 + AT_rich Low_complexity Low_complexity 1 29 -22 2143 118 3 0 chr20 54785224 54785513 -17368369 + AluSx SINE Alu 1 290 -22 31 19 0 38 chr20 54785513 54785536 -17368346 + AT_rich Low_complexity Low_complexity 29 51 0 1734 171 0 0 chr20 54785536 54785799 -17368083 - AluJo SINE Alu -49 263 1 320 251 78 90 chr20 54785831 54785924 -17367958 + MER102b DNA MER1_type 137 230 -1198 2272 82 4 0 chr20 54785924 54786251 -17367631 - AluSg SINE Alu 0 328 1 320 251 78 90 chr20 54786251 54786323 -17367559 + MER102b DNA MER1_type 230 301 -40 182 268 204 25 chr20 54786372 54786529 -17367353 + L2 LINE L2 2824 3008 -305 343 285 38 48 chr20 54786568 54786754 -17367128 + MLT1J2 LTR MaLR 264 447 -3 2275 114 3 0 chr20 54787653 54787952 -17365930 + AluSx SINE Alu 1 300 -12 23 0 0 0 chr20 54788081 54788104 -17365778 + AT_rich Low_complexity Low_complexity 1 23 0 2502 85 0 0 chr20 54788108 54788413 -17365469 - AluSg SINE Alu -5 305 1 195 242 23 121 chr20 54788419 54788489 -17365393 + L2 LINE L2 3148 3201 -112 2263 109 7 0 chr20 54788489 54788782 -17365100 + AluSx SINE Alu 1 295 -17 195 242 23 121 chr20 54788782 54788843 -17365039 + L2 LINE L2 3201 3266 -47 1117 122 79 0 chr20 54788847 54789011 -17364871 + FRAM SINE Alu 1 176 0 2179 125 0 0 chr20 54789013 54789309 -17364573 + AluSx SINE Alu 4 299 -13 2365 89 0 3 chr20 54789316 54789619 -17364263 - AluY SINE Alu -9 302 1 1055 99 0 0 chr20 54789641 54789772 -17364110 - AluSq/x SINE Alu -178 135 5 2359 105 3 0 chr20 54789782 54790088 -17363794 - AluSg SINE Alu -3 307 1 2600 172 60 72 chr20 54790088 54790370 -17363512 + LTR8A LTR ERV1 72 356 -371 1632 138 28 28 chr20 54790370 54790714 -17363168 + AluJo SINE Alu 1 344 0 2600 172 60 72 chr20 54790714 54791092 -17362790 + LTR8A LTR ERV1 356 725 -2 1706 191 0 17 chr20 54791126 54791425 -17362457 + AluJb SINE Alu 1 294 -18 332 143 0 0 chr20 54791578 54791627 -17362255 - MER66A LTR ERV1 -142 336 288 1011 174 15 30 chr20 54791629 54791830 -17362052 + MER20 DNA MER1_type 22 219 0 266 163 0 0 chr20 54791922 54791965 -17361917 + MER57A LTR ERV1 295 337 -66 275 229 18 59 chr20 54792013 54792135 -17361747 + LTR16A1 LTR ERVL 31 148 -302 727 199 46 83 chr20 54792153 54792270 -17361612 - MER20 DNA MER1_type -11 208 101 1584 87 14 23 chr20 54792270 54792489 -17361393 - AluSg/x SINE Alu -11 299 83 727 199 46 83 chr20 54792489 54792587 -17361295 - MER20 DNA MER1_type -118 101 1 455 296 43 1 chr20 54792591 54792809 -17361073 + LTR16A LTR ERVL 178 434 -16 331 322 19 9 chr20 54792826 54792943 -17360939 - MIR SINE MIR -81 127 8 1398 128 206 4 chr20 54792982 54793225 -17360657 - AluSg1 SINE Alu -15 294 3 946 157 0 0 chr20 54793509 54793643 -17360239 - FLAM_C SINE Alu -9 134 1 503 160 21 11 chr20 54793650 54793744 -17360138 - FLAM_C SINE Alu -3 140 46 838 148 0 15 chr20 54793932 54794067 -17359815 + AluJo/FLAM SINE Alu 1 133 -169 2562 68 0 7 chr20 54794067 54794377 -17359505 + AluSc SINE Alu 1 308 -1 271 208 60 13 chr20 54794416 54794565 -17359317 + (TA)n Simple_repeat Simple_repeat 1 156 0 201 235 35 24 chr20 54794532 54794617 -17359265 + (TATATG)n Simple_repeat Simple_repeat 5 90 0 * 578 188 10 0 chr20 54794652 54794753 -17359129 - MIR SINE MIR -98 164 63 1416 200 23 55 chr20 54795008 54795221 -17358661 - AluJo SINE Alu -12 300 99 2385 100 0 7 chr20 54795221 54795531 -17358351 - AluY SINE Alu -3 308 1 1416 200 23 55 chr20 54795531 54795627 -17358255 - AluJo SINE Alu -213 99 1 2482 71 0 3 chr20 54795676 54795973 -17357909 - AluY SINE Alu -15 296 1 2120 145 3 0 chr20 54796326 54796636 -17357246 + AluSx SINE Alu 2 312 0 344 191 27 0 chr20 54796739 54796887 -17356995 + GA-rich Low_complexity Low_complexity 1 151 0 2341 97 0 25 chr20 54796983 54797303 -17356579 + AluSx SINE Alu 1 312 0 1141 215 20 36 chr20 54797305 54797607 -17356275 + MLT1C LTR MaLR 171 467 0 1249 264 50 48 chr20 54797608 54798000 -17355882 + L1MC4a LINE L1 5402 5797 -2011 984 159 21 92 chr20 54798000 54798117 -17355765 - MER58A DNA MER1_type -2198 222 129 2109 110 3 0 chr20 54798117 54798408 -17355474 + AluSx SINE Alu 1 292 -20 984 159 21 92 chr20 54798408 54798529 -17355353 - MER58A DNA MER1_type -2291 129 1 1249 264 50 48 chr20 54798529 54798635 -17355247 + L1MC4a LINE L1 5797 5901 -1907 27 29 0 0 chr20 54798646 54798680 -17355202 + AT_rich Low_complexity Low_complexity 1 34 0 2076 133 0 0 chr20 54799008 54799316 -17354566 - AluSx SINE Alu -4 308 1 1077 152 43 105 chr20 54799317 54799593 -17354289 + MER58B DNA MER1_type 77 335 -6 2185 71 41 3 chr20 54799877 54800189 -17353693 - AluY SINE Alu 0 323 1 1972 118 0 0 chr20 54800243 54800523 -17353359 - AluSx SINE Alu -32 280 1 283 245 43 43 chr20 54800799 54800893 -17352989 + MER112 DNA MER1_type 6 99 -161 1479 202 13 7 chr20 54800897 54801199 -17352683 + AluJo SINE Alu 1 304 -8 2034 136 0 0 chr20 54801199 54801493 -17352389 - AluSx SINE Alu -18 294 1 2252 88 0 0 chr20 54801509 54801815 -17352067 - AluSg SINE Alu -4 306 1 475 256 164 27 chr20 54801815 54802067 -17351815 + L1MB7 LINE L1 5936 6152 -405 2182 110 0 22 chr20 54802067 54802386 -17351496 + AluSx SINE Alu 1 312 0 475 256 164 27 chr20 54802386 54802407 -17351475 + L1MB7 LINE L1 6152 6557 0 287 374 88 6 chr20 54802416 54802587 -17351295 - L3 LINE CR1 -1342 235 51 934 298 58 33 chr20 54802862 54803224 -17350658 + MLT1K LTR MaLR 18 388 -200 330 67 0 0 chr20 54803247 54803292 -17350590 + (TAAAAA)n Simple_repeat Simple_repeat 2 46 0 2268 76 3 10 chr20 54803301 54803603 -17350279 + AluSx SINE Alu 1 300 -12 1968 114 55 0 chr20 54803637 54803927 -17349955 + AluSx SINE Alu 1 306 -6 468 204 108 54 chr20 54803927 54804094 -17349788 + MLT1K LTR MaLR 387 562 -26 1997 132 6 3 chr20 54804117 54804428 -17349454 + AluSx SINE Alu 1 312 0 34 42 0 0 chr20 54804428 54804476 -17349406 + AT_rich Low_complexity Low_complexity 1 48 0 1094 237 77 109 chr20 54804482 54804545 -17349337 + MLT1J LTR MaLR 6 69 -442 1597 168 6 51 chr20 54804545 54804861 -17349021 - AluJb SINE Alu -10 302 1 1094 237 77 109 chr20 54804861 54805265 -17348617 + MLT1J LTR MaLR 69 458 -53 313 262 66 38 chr20 54805309 54805492 -17348390 - L1MC/D LINE L1 -2281 5527 5340 255 125 0 0 chr20 54805493 54805533 -17348349 + (TCCCC)n Simple_repeat Simple_repeat 4 43 0 437 235 44 66 chr20 54805555 54805569 -17348313 - MLT1K LTR MaLR -158 430 417 1468 180 32 3 chr20 54805569 54805852 -17348030 - AluJo SINE Alu -1 311 21 437 235 44 66 chr20 54805852 54805872 -17348010 - MLT1K LTR MaLR -171 417 398 2220 50 21 0 chr20 54805872 54806151 -17347731 - AluY SINE Alu -6 305 21 437 235 44 66 chr20 54806151 54806298 -17347584 - MLT1K LTR MaLR -190 398 252 293 173 29 101 chr20 54806302 54806395 -17347487 + L1M4 LINE L1 5186 5267 -879 2046 116 7 0 chr20 54806395 54806689 -17347193 + AluSx SINE Alu 1 296 -16 293 173 29 101 chr20 54806689 54806734 -17347148 + L1M4 LINE L1 5267 5314 -832 894 203 31 12 chr20 54806749 54806912 -17346970 + FAM SINE Alu 1 166 -9 2038 120 0 0 chr20 54806947 54807238 -17346644 + AluSg SINE Alu 1 291 -19 1674 169 10 7 chr20 54807238 54807538 -17346344 + AluJb SINE Alu 1 302 -10 2210 106 3 0 chr20 54807543 54807855 -17346027 + AluSp SINE Alu 1 313 0 321 67 0 33 chr20 54807861 54807920 -17345962 + L1MC1 LINE L1 5313 5366 -978 2297 88 0 0 chr20 54807921 54808218 -17345664 + AluSg SINE Alu 1 297 -13 204 125 0 0 chr20 54808218 54808250 -17345632 + (TA)n Simple_repeat Simple_repeat 1 32 0 2465 145 19 113 chr20 54808253 54808388 -17345494 + L1MC1 LINE L1 5341 5487 -857 1860 159 0 3 chr20 54808388 54808689 -17345193 - AluJb SINE Alu -12 300 1 2465 145 19 113 chr20 54808689 54808715 -17345167 + L1MC1 LINE L1 5487 5514 -830 2109 110 0 28 chr20 54808715 54809033 -17344849 - AluSc SINE Alu 0 309 1 2465 145 19 113 chr20 54809033 54809386 -17344496 + L1MC1 LINE L1 5514 5795 -549 1918 134 0 23 chr20 54809386 54809692 -17344190 + AluSx SINE Alu 1 299 -13 2465 145 19 113 chr20 54809692 54809751 -17344131 + L1MC1 LINE L1 5795 5858 -486 818 182 118 166 chr20 54809751 54809899 -17343983 - MSTB2 LTR MaLR 0 457 303 1507 181 24 24 chr20 54809899 54810035 -17343847 + AluJo SINE Alu 1 136 -166 1937 121 0 20 chr20 54810035 54810169 -17343713 + AluSc SINE Alu 1 136 -173 1647 119 29 74 chr20 54810169 54810481 -17343401 + AluSx SINE Alu 1 298 -14 1937 121 0 20 chr20 54810481 54810644 -17343238 + AluSc SINE Alu 136 292 -17 2118 109 0 13 chr20 54810645 54810977 -17342905 + AluSx SINE Alu 1 312 0 1507 181 24 24 chr20 54810977 54811130 -17342752 + AluJo SINE Alu 135 292 -10 1844 156 0 3 chr20 54811133 54811421 -17342461 + AluJo SINE Alu 1 287 -25 2217 106 0 0 chr20 54811431 54811743 -17342139 + AluSx SINE Alu 1 312 0 818 182 118 166 chr20 54811743 54811852 -17342030 - MSTB2 LTR MaLR -165 292 179 2147 90 24 0 chr20 54811852 54812140 -17341742 - AluSp SINE Alu -18 295 1 818 182 118 166 chr20 54812140 54812323 -17341559 - MSTB2 LTR MaLR -278 179 23 2334 159 26 46 chr20 54812330 54812751 -17341131 + L1MC1 LINE L1 5842 6270 -63 388 0 19 19 chr20 54812751 54812804 -17341078 + (TTTA)n Simple_repeat Simple_repeat 2 54 0 1986 108 7 0 chr20 54812807 54813086 -17340796 - AluSq SINE Alu -32 281 1 2007 141 0 0 chr20 54813088 54813385 -17340497 - AluSx SINE Alu -15 297 1 1548 181 24 20 chr20 54813389 54813682 -17340200 - AluJo SINE Alu -8 294 1 2334 159 26 46 chr20 54813682 54813745 -17340137 + L1MC1 LINE L1 6276 6328 -5 27 0 0 26 chr20 54813745 54813758 -17340124 + AT_rich Low_complexity Low_complexity 1 13 -24 2393 75 0 0 chr20 54813758 54814064 -17339818 - AluY SINE Alu -5 306 1 27 0 0 26 chr20 54814064 54814088 -17339794 + AT_rich Low_complexity Low_complexity 13 37 0 2101 108 0 7 chr20 54814088 54814383 -17339499 - AluSq SINE Alu -20 293 1 567 345 16 32 chr20 54814410 54814560 -17339322 - MLT1K LTR MaLR -334 254 108 1626 179 0 35 chr20 54814560 54814878 -17339004 + AluJo SINE Alu 1 307 -5 567 345 16 32 chr20 54814878 54814976 -17338906 - MLT1K LTR MaLR -480 108 10 262 244 0 58 chr20 54815136 54815222 -17338660 - L2 LINE L2 -19 3294 3214 252 143 0 0 chr20 54815817 54815859 -17338023 + (TA)n Simple_repeat Simple_repeat 1 42 0 2180 110 0 3 chr20 54815859 54816167 -17337715 - AluSx SINE Alu -5 307 1 1438 163 62 21 chr20 54816233 54816522 -17337360 - AluJb SINE Alu -7 305 5 302 148 0 0 chr20 54816621 54816675 -17337207 + Alu SINE Alu 245 298 -4 * 828 163 175 12 chr20 54816670 54816836 -17337046 - MER58A DNA MER1_type -23 201 9 654 201 5 132 chr20 54816852 54816995 -17336887 - MER5B DNA MER1_type 0 178 67 2035 133 0 0 chr20 54816995 54817295 -17336587 + AluSx SINE Alu 1 300 -12 654 201 5 132 chr20 54817295 54817355 -17336527 - MER5B DNA MER1_type -111 67 1 766 291 74 16 chr20 54817978 54818301 -17335581 + L1MC4 LINE L1 5508 5849 -1959 1011 114 18 123 chr20 54818406 54818585 -17335297 - MER20 DNA MER1_type 0 219 65 1584 113 76 60 chr20 54818585 54818886 -17334996 + AluSx SINE Alu 1 306 -6 1011 114 18 123 chr20 54818886 54818925 -17334957 - MER20 DNA MER1_type -154 65 24 408 109 0 0 chr20 54819167 54819222 -17334660 + AluSq SINE Alu 1 55 -245 391 121 14 71 chr20 54819224 54819302 -17334580 + (CATATA)n Simple_repeat Simple_repeat 2 70 -63 306 0 0 0 chr20 54819302 54819336 -17334546 + (TG)n Simple_repeat Simple_repeat 2 35 0 391 121 14 71 chr20 54819336 54819397 -17334485 + (CATATA)n Simple_repeat Simple_repeat 70 133 0 406 279 10 8 chr20 54819420 54819542 -17334340 - L1MC4 LINE L1 -1340 6702 6615 * 417 231 0 22 chr20 54819463 54819554 -17334328 + L1MC4 LINE L1 6615 6703 -1339 1644 100 9 4 chr20 54819596 54819826 -17334056 + AluSq SINE Alu 65 295 -18 866 117 0 0 chr20 54819938 54820058 -17333824 + FLAM_C SINE Alu 1 120 -23 2335 59 0 3 chr20 54820078 54820366 -17333516 + AluY SINE Alu 1 287 -24 206 241 37 0 chr20 54821001 54821109 -17332773 + (CA)n Simple_repeat Simple_repeat 1 112 0 199 234 26 0 chr20 54821199 54821276 -17332606 + (CA)n Simple_repeat Simple_repeat 1 79 0 314 158 19 57 chr20 54821287 54821445 -17332437 + (CATATA)n Simple_repeat Simple_repeat 6 157 0 983 169 6 6 chr20 54821598 54821776 -17332106 - AluJo SINE Alu -12 300 123 282 257 14 0 chr20 54821781 54821855 -17332027 + Charlie8 DNA MER1_type 77 151 -2266 483 244 70 19 chr20 54821979 54822135 -17331747 + MIR SINE MIR 17 180 -82 782 259 36 0 chr20 54822135 54822359 -17331523 - L1ME1 LINE L1 -3 6163 5932 236 276 73 57 chr20 54823126 54823249 -17330633 + MIR3 SINE MIR 37 161 -47 203 317 50 8 chr20 54823288 54823408 -17330474 + L2 LINE L2 1954 2078 -1236 461 189 38 38 chr20 54823490 54823596 -17330286 - MER20 DNA MER1_type -34 185 80 328 329 31 12 chr20 54823626 54823787 -17330095 + L2 LINE L2 2209 2372 -942 718 199 35 41 chr20 54823831 54824002 -17329880 - MER20 DNA MER1_type -43 176 7 713 264 116 103 chr20 54824019 54824658 -17329224 + L2 LINE L2 2668 3313 0 2125 93 7 3 chr20 54824680 54824970 -17328912 + AluSp SINE Alu 1 291 -22 1546 148 34 38 chr20 54824995 54825286 -17328596 + AluJo SINE Alu 1 290 -22 405 0 0 0 chr20 54825291 54825336 -17328546 + (CAT)n Simple_repeat Simple_repeat 2 46 0 225 241 0 17 chr20 54825368 54825426 -17328456 - MER112 DNA MER1_type -99 161 105 1997 126 3 0 chr20 54825530 54825824 -17328058 + AluSq SINE Alu 1 295 -18 582 219 77 113 chr20 54827358 54827605 -17326277 + MIR SINE MIR 23 260 -2 814 253 61 0 chr20 54827665 54827863 -17326019 + MER20 DNA MER1_type 1 210 -9 2005 138 0 0 chr20 54828013 54828317 -17325565 - AluSx SINE Alu -8 304 1 1938 128 0 7 chr20 54828494 54828784 -17325098 + AluJb SINE Alu 2 289 -23 204 40 0 0 chr20 54828784 54828809 -17325073 + (TA)n Simple_repeat Simple_repeat 2 26 0 2016 119 0 7 chr20 54829170 54829483 -17324399 - AluSx SINE Alu 0 311 1 1977 104 0 14 chr20 54830037 54830324 -17323558 - AluSq SINE Alu -30 283 1 239 308 15 39 chr20 54830324 54830454 -17323428 + L2 LINE L2 2459 2585 -729 478 179 113 53 chr20 54830454 54830556 -17323326 + MER106A DNA MER1_type 1 116 -120 181 0 69 0 chr20 54830556 54830585 -17323297 + (TG)n Simple_repeat Simple_repeat 2 32 0 478 179 113 53 chr20 54830585 54830633 -17323249 + MER106A DNA MER1_type 116 160 -76 2471 173 42 50 chr20 54830633 54831175 -17322707 + L1MB5 LINE L1 5631 6168 -6 21 0 0 0 chr20 54831227 54831248 -17322634 + GC_rich Low_complexity Low_complexity 1 21 0 273 301 87 53 chr20 54831277 54831732 -17322150 + L2 LINE L2 2593 3107 -206 1627 136 22 63 chr20 54831918 54832031 -17321851 + AluSx SINE Alu 1 117 -195 2448 50 0 3 chr20 54832031 54832333 -17321549 - AluY SINE Alu -10 301 1 1627 136 22 63 chr20 54832333 54832536 -17321346 + AluSx SINE Alu 117 304 -8 2086 123 7 0 chr20 54832659 54832969 -17320913 + AluSx SINE Alu 1 312 0 563 190 99 0 chr20 54833015 54833136 -17320746 + MER20 DNA MER1_type 82 214 -5 1538 195 24 3 chr20 54833702 54833994 -17319888 + AluJo SINE Alu 1 298 -14 982 108 0 0 chr20 54833994 54834133 -17319749 + AluSp/q SINE Alu 164 302 -11 27 29 0 0 chr20 54834134 54834168 -17319714 + AT_rich Low_complexity Low_complexity 1 34 0 953 127 0 8 chr20 54834320 54834454 -17319428 + FLAM_A SINE Alu 1 133 0 245 267 30 84 chr20 54834505 54834536 -17319346 + Charlie8 DNA MER1_type 126 157 -173 2446 65 0 0 chr20 54834536 54834842 -17319040 + AluY SINE Alu 1 306 -5 245 267 30 84 chr20 54834842 54834941 -17318941 + Charlie8 DNA MER1_type 157 249 -81 2149 84 0 7 chr20 54835437 54835723 -17318159 - AluSx SINE Alu -28 284 1 2310 82 0 0 chr20 54835823 54836115 -17317767 - AluY SINE Alu -17 294 3 581 238 55 24 chr20 54836870 54837034 -17316848 + MER58B DNA MER1_type 2 170 -171 1758 141 0 0 chr20 54837038 54837300 -17316582 + AluSx SINE Alu 35 296 -16 818 183 0 0 chr20 54837385 54837516 -17316366 - FRAM SINE Alu -24 152 22 284 253 81 30 chr20 54837521 54837620 -17316262 + MER58B DNA MER1_type 224 327 -14 216 135 0 0 chr20 54838722 54838759 -17315123 + (GA)n Simple_repeat Simple_repeat 2 38 0 2137 103 0 7 chr20 54838950 54839250 -17314632 + AluSx SINE Alu 1 298 -14 1582 175 0 46 chr20 54839323 54839649 -17314233 - AluJb SINE Alu -1 311 1 23 0 0 0 chr20 54840647 54840670 -17313212 + AT_rich Low_complexity Low_complexity 1 23 0 1908 129 7 7 chr20 54841392 54841711 -17312171 - AluSg SINE Alu 0 319 1 1500 186 3 35 chr20 54841711 54842023 -17311859 - AluJo SINE Alu -10 302 1 370 283 65 51 chr20 54842077 54842327 -17311555 - Charlie8 DNA MER1_type -2144 273 33 1406 139 117 11 chr20 54842928 54843201 -17310681 + AluSg1 SINE Alu 1 302 -7 25 0 0 0 chr20 54843229 54843254 -17310628 + AT_rich Low_complexity Low_complexity 1 25 0 255 303 134 0 chr20 54843345 54843443 -17310439 + MIR SINE MIR 55 162 -66 1719 163 3 10 chr20 54843581 54843887 -17309995 + AluSx SINE Alu 1 304 -8 238 310 155 17 chr20 54844748 54844864 -17309018 + L2 LINE L2 3141 3272 0 2147 112 3 0 chr20 54846185 54846490 -17307392 + AluSx SINE Alu 3 308 -4 229 329 26 0 chr20 54846494 54846570 -17307312 + MIR SINE MIR 42 119 -89 602 237 25 68 chr20 54847515 54847669 -17306213 + L2 LINE L2 2542 2684 -630 1922 146 0 0 chr20 54847669 54847963 -17305919 - AluSx SINE Alu -18 294 1 602 237 25 68 chr20 54847963 54848044 -17305838 + L2 LINE L2 2684 2767 -547 486 223 204 19 chr20 54848080 54848237 -17305645 + MER20 DNA MER1_type 30 215 -4 209 336 23 8 chr20 54848241 54848369 -17305513 + L2 LINE L2 2768 2897 -417 599 307 69 13 chr20 54848502 54848733 -17305149 + MIR SINE MIR 3 246 -16 723 265 143 9 chr20 54848739 54848962 -17304920 - MIR SINE MIR -7 255 3 225 139 0 0 chr20 54849205 54849241 -17304641 + L1P5 LINE L1 5411 5446 -705 285 284 142 36 chr20 54849358 54849633 -17304249 + L1ME4a LINE L1 5605 5908 -213 849 172 0 0 chr20 54849649 54849783 -17304099 + AluJo SINE Alu 1 134 -178 248 0 31 0 chr20 54849869 54849918 -17303964 + (TCTA)n Simple_repeat Simple_repeat 1 47 -350 2131 133 3 7 chr20 54849918 54850219 -17303663 - AluSx SINE Alu -12 300 1 248 0 31 0 chr20 54850222 54850254 -17303628 + (TCTA)n Simple_repeat Simple_repeat 2 34 0 916 135 0 0 chr20 54851450 54851576 -17302306 + FLAM_C SINE Alu 1 126 -7 270 81 0 0 chr20 54851578 54851615 -17302267 + (CA)n Simple_repeat Simple_repeat 2 38 0 256 304 36 29 chr20 54851780 54851918 -17301964 + Charlie8 DNA MER1_type 37 175 -2242 2287 112 3 3 chr20 54852130 54852433 -17301449 - AluSx SINE Alu -9 303 1 2044 126 0 0 chr20 54852565 54852865 -17301017 + AluSx SINE Alu 6 305 0 2352 242 53 18 chr20 54852877 54853691 -17300191 + L1ME2 LINE L1 5321 6162 -2 2500 81 3 0 chr20 54854324 54854631 -17299251 - AluSp SINE Alu -5 308 1 383 308 49 38 chr20 54854681 54854866 -17299016 - MIR SINE MIR -70 192 6 276 305 49 12 chr20 54856428 54856510 -17297372 - MER91B DNA MER1_type -1 189 105 1754 152 27 37 chr20 54856510 54856807 -17297075 + AluJo SINE Alu 1 294 -18 914 140 6 0 chr20 54856815 54856994 -17296888 + GA-rich Low_complexity Low_complexity 1 180 0 265 296 14 0 chr20 54857072 54857143 -17296739 - MER91B DNA MER1_type -60 130 59 1723 136 64 75 chr20 54857504 54857813 -17296069 + THE1C LTR MaLR 1 308 -67 1967 113 3 18 chr20 54857813 54858124 -17295758 + AluSx SINE Alu 8 314 0 1723 136 64 75 chr20 54858124 54858189 -17295693 + THE1C LTR MaLR 308 372 -3 1981 136 3 26 chr20 54858855 54859165 -17294717 + AluJb SINE Alu 5 307 -5 1941 164 3 0 chr20 54860414 54860712 -17293170 + AluJo SINE Alu 1 299 -13 309 236 102 24 chr20 54861013 54861140 -17292742 - L1MC4a LINE L1 -1853 5955 5819 1853 175 0 10 chr20 54861162 54861465 -17292417 - AluJo SINE Alu -12 300 1 678 294 128 40 chr20 54861640 54862014 -17291868 + L2 LINE L2 2906 3312 -1 632 245 38 25 chr20 54862970 54863129 -17290753 + MIR SINE MIR 44 204 -58 2503 77 0 10 chr20 54863309 54863622 -17290260 - AluSg SINE Alu 0 310 1 282 200 0 18 chr20 54863982 54864037 -17289845 + MIR SINE MIR 76 129 -133 1417 131 0 32 chr20 54864458 54864625 -17289257 - AluJb SINE Alu -15 297 137 459 0 0 0 chr20 54864625 54864676 -17289206 + (TG)n Simple_repeat Simple_repeat 2 52 0 1417 131 0 32 chr20 54864676 54864729 -17289153 - AluJb SINE Alu -175 137 84 2335 99 0 3 chr20 54864893 54865196 -17288686 - AluSq SINE Alu -11 302 1 1296 85 188 82 chr20 54865369 54865527 -17288355 + MER46B DNA MER2_type 7 147 -2584 2739 80 19 19 chr20 54865527 54865902 -17287980 + THE1C LTR MaLR 1 375 0 1296 85 188 82 chr20 54865902 54865935 -17287947 + MER46B DNA MER2_type 147 175 -2556 1877 115 74 0 chr20 54865935 54866204 -17287678 + AluSx SINE Alu 1 289 -23 1296 85 188 82 chr20 54866204 54866330 -17287552 + MER46B DNA MER2_type 175 234 -2 780 220 53 43 chr20 54866635 54866844 -17287038 - MER20 DNA MER1_type -7 212 2 1961 94 84 4 chr20 54867176 54867451 -17286431 + AluSx SINE Alu 1 297 -15 1038 204 22 27 chr20 54868035 54868260 -17285622 - MER58A DNA MER1_type 0 224 1 1536 187 18 21 chr20 54868701 54868984 -17284898 + AluJo SINE Alu 1 282 -30 2235 112 20 0 chr20 54868984 54869279 -17284603 - AluSx SINE Alu -9 303 3 1731 147 0 88 chr20 54869846 54870186 -17283696 + AluJb SINE Alu 1 310 -2 1071 114 0 0 chr20 54870314 54870454 -17283428 - AluSg/x SINE Alu -15 295 156 297 156 39 39 chr20 54870662 54870739 -17283143 - Charlie8 DNA MER1_type -2152 265 189 727 137 65 33 chr20 54870752 54870905 -17282977 + MLT1A1 LTR MaLR 1 158 -207 2181 102 0 24 chr20 54870909 54871225 -17282657 + AluSq SINE Alu 1 309 0 448 167 143 0 chr20 54871239 54871323 -17282559 + FLAM_A SINE Alu 29 124 -18 1611 127 4 0 chr20 54871349 54871578 -17282304 + AluSq SINE Alu 64 293 -20 2248 109 0 10 chr20 54871578 54871882 -17282000 + AluSg SINE Alu 1 301 -9 366 155 42 0 chr20 54871883 54871954 -17281928 - Charlie5 DNA MER1_type -2531 81 8 2298 103 0 7 chr20 54871960 54872261 -17281621 - AluSx SINE Alu -13 299 1 437 175 88 44 chr20 54872388 54872502 -17281380 - MIR SINE MIR -87 175 57 363 257 88 9 chr20 54873031 54873050 -17280832 - MIR3 SINE MIR -31 177 161 2406 77 0 10 chr20 54873050 54873347 -17280535 - AluSc SINE Alu -15 294 1 363 257 88 9 chr20 54873347 54873440 -17280442 - MIR3 SINE MIR -47 161 56 615 277 94 68 chr20 54874138 54874256 -17279626 + Charlie8 DNA MER1_type 41 155 -2262 2118 120 34 0 chr20 54874256 54874548 -17279334 + AluSg SINE Alu 1 302 -8 615 277 94 68 chr20 54874548 54874899 -17278983 + Charlie8 DNA MER1_type 155 522 -1895 757 109 0 9 chr20 54875068 54875178 -17278704 + AluSq/x SINE Alu 1 109 -204 241 288 130 20 chr20 54875217 54875363 -17278519 - L1MC/D LINE L1 -2042 5766 5605 1701 110 0 17 chr20 54875391 54875628 -17278254 + AluSg/x SINE Alu 67 299 -13 1619 112 0 18 chr20 54876324 54876548 -17277334 + AluSg/x SINE Alu 79 298 -12 239 274 113 42 chr20 54876656 54876824 -17277058 + L1MC/D LINE L1 5605 5784 -2024 721 224 58 0 chr20 54876825 54876981 -17276901 + FRAM SINE Alu 1 165 -1 21 0 0 0 chr20 54876981 54877002 -17276880 + AT_rich Low_complexity Low_complexity 1 21 0 362 80 4 4 chr20 54877010 54877075 -17276807 + AluJb SINE Alu 89 137 -165 2535 62 0 10 chr20 54877081 54877387 -17276495 + AluY SINE Alu 1 303 -8 2267 115 0 3 chr20 54877390 54877695 -17276187 + AluSx SINE Alu 1 304 -8 2094 147 0 0 chr20 54877957 54878264 -17275618 + AluSx SINE Alu 1 307 -5 647 169 42 0 chr20 54878264 54878382 -17275500 + MER5A DNA MER1_type 66 188 -1 234 211 53 0 chr20 54878565 54878622 -17275260 + MIR SINE MIR 89 148 -60 2445 95 0 0 chr20 54879791 54880087 -17273795 + AluSg SINE Alu 1 296 -14 2351 108 0 7 chr20 54880251 54880558 -17273324 + AluSx SINE Alu 1 305 -7 374 241 0 0 chr20 54880627 54880706 -17273176 - MIR SINE MIR -156 106 28 229 323 15 0 chr20 54880709 54880774 -17273108 - MIR SINE MIR -192 70 5 634 287 101 21 chr20 54881492 54881729 -17272153 + MIR SINE MIR 2 257 -5 201 231 0 0 chr20 54881759 54881798 -17272084 + CT-rich Low_complexity Low_complexity 2 40 0 2125 109 7 23 chr20 54884177 54884481 -17269401 + AluSx SINE Alu 1 299 -13 192 273 23 0 chr20 54884892 54884936 -17268946 - MIR SINE MIR -1 261 217 1090 122 21 21 chr20 54885066 54885254 -17268628 + MER20 DNA MER1_type 32 219 0 262 314 226 0 chr20 54885513 54885597 -17268285 - MIR SINE MIR -2 260 196 2181 141 0 0 chr20 54885597 54885901 -17267981 - AluJb SINE Alu -8 304 1 262 314 226 0 chr20 54885901 54885975 -17267907 - MIR SINE MIR -66 196 66 1819 98 113 7 chr20 54886175 54886449 -17267433 - AluSg1 SINE Alu -6 303 1 854 243 77 0 chr20 54886668 54886890 -17266992 + MIR SINE MIR 2 240 -22 1456 199 60 14 chr20 54886984 54887266 -17266616 - AluJb SINE Alu -17 295 1 261 195 122 49 chr20 54887557 54887639 -17266243 + MIR SINE MIR 56 143 -65 2301 98 0 13 chr20 54887659 54887964 -17265918 + AluSc SINE Alu 1 301 -8 2326 82 13 7 chr20 54887977 54888280 -17265602 + AluSq SINE Alu 3 307 -6 401 271 175 59 chr20 54888284 54888643 -17265239 + L2 LINE L2 2710 3150 -163 2295 109 10 0 chr20 54888643 54888945 -17264937 - AluSx SINE Alu -7 305 1 401 271 175 59 chr20 54888945 54889085 -17264797 + L2 LINE L2 3150 3272 -41 2054 90 55 48 chr20 54889513 54889679 -17264203 - AluSq SINE Alu 0 313 143 2125 113 3 7 chr20 54889679 54889998 -17263884 - AluSg SINE Alu 0 310 1 2054 90 55 48 chr20 54889998 54890142 -17263740 - AluSq SINE Alu -170 143 1 1294 73 61 0 chr20 54890872 54891037 -17262845 - AluSg SINE Alu -127 183 9 2010 144 20 7 chr20 54891112 54891410 -17262472 + AluSx SINE Alu 1 302 -10 1822 157 17 3 chr20 54891548 54891842 -17262040 - AluJb SINE Alu -4 308 11 2221 92 42 0 chr20 54892214 54892498 -17261384 - AluSx SINE Alu -16 296 1 203 207 17 52 chr20 54892525 54892583 -17261299 - L2 LINE L2 -2 3270 3215 802 210 23 68 chr20 54892991 54893150 -17260732 + MER3 DNA MER1_type 1 149 -60 2362 88 3 0 chr20 54893150 54893444 -17260438 - AluSp SINE Alu -18 295 1 802 210 23 68 chr20 54893444 54893503 -17260379 + MER3 DNA MER1_type 149 209 0 1435 144 8 61 chr20 54893976 54894240 -17259642 - AluJo SINE Alu -58 254 5 222 339 119 0 chr20 54894255 54894364 -17259518 - L2 LINE L2 -557 2757 2636 195 244 146 12 chr20 54894569 54894651 -17259231 - L2 LINE L2 0 3313 3221 517 343 178 9 chr20 54895122 54895662 -17258220 - L2 LINE L2 -915 2399 1769 1133 69 0 0 chr20 54895663 54895793 -17258089 + AluSg SINE Alu 2 131 -179 2052 108 0 0 chr20 54895805 54896064 -17257818 + AluSg SINE Alu 35 293 -17 1863 184 0 0 chr20 54896170 54896479 -17257403 + AluJo SINE Alu 3 311 -1 1040 227 21 0 chr20 54896493 54896731 -17257151 + L1MB8 LINE L1 5587 5829 -355 256 233 55 0 chr20 54896731 54896804 -17257078 - Tigger5 DNA MER2_type 0 2323 2247 831 148 171 136 chr20 54896812 54897076 -17256806 + AluJo SINE Alu 8 280 -32 1933 112 7 11 chr20 54897091 54897189 -17256693 + AluSx SINE Alu 32 129 -183 2403 95 10 0 chr20 54897189 54897495 -17256387 + AluSc SINE Alu 1 309 0 1933 112 7 11 chr20 54897495 54897672 -17256210 + AluSx SINE Alu 129 306 -6 219 69 0 0 chr20 54897694 54897723 -17256159 + (TAAA)n Simple_repeat Simple_repeat 3 31 0 1042 122 72 0 chr20 54897723 54897904 -17255978 - Tigger5 DNA MER2_type -76 2247 2054 604 180 153 7 chr20 54897902 54898052 -17255830 - Tigger5 DNA MER2_type -2105 218 47 * 1625 123 10 121 chr20 54898066 54898346 -17255536 + L1MB8 LINE L1 5827 6136 -42 198 0 0 0 chr20 54898346 54898368 -17255514 + (TA)n Simple_repeat Simple_repeat 2 23 0 2103 98 4 4 chr20 54898375 54898650 -17255232 - AluSx SINE Alu -37 275 1 1625 123 10 121 chr20 54898650 54898706 -17255176 + L1MB8 LINE L1 6142 6127 -51 2051 136 3 3 chr20 54898706 54899007 -17254875 + AluJb SINE Alu 3 303 -9 1625 123 10 121 chr20 54899007 54899050 -17254832 + L1MB8 LINE L1 6126 6172 -6 2097 97 25 0 chr20 54900810 54901119 -17252763 + AluSx SINE Alu 1 316 0 732 167 15 8 chr20 54901126 54901258 -17252624 + AluJb SINE Alu 2 134 -178 406 248 30 0 chr20 54901290 54901393 -17252489 + MIR SINE MIR 91 197 -63 2556 78 0 0 chr20 54902705 54903012 -17250870 - AluY SINE Alu -4 307 1 341 267 194 53 chr20 54903181 54903226 -17250656 - MIR SINE MIR 0 262 225 2436 61 0 14 chr20 54903226 54903520 -17250362 - AluY SINE Alu -21 290 1 341 267 194 53 chr20 54903520 54903680 -17250202 - MIR SINE MIR -37 225 28 2044 103 3 24 chr20 54903686 54903977 -17249905 - AluSg SINE Alu -15 295 11 1013 163 0 30 chr20 54904084 54904250 -17249632 + FAM SINE Alu 12 172 -13 2031 106 22 51 chr20 54904250 54904562 -17249320 + AluSx SINE Alu 1 303 -9 329 277 18 9 chr20 54904635 54904747 -17249135 + L1ME3 LINE L1 6009 6121 -41 4151 138 122 140 chr20 54904769 54904995 -17248887 + L1MC3 LINE L1 6428 6657 -1128 2203 136 0 0 chr20 54904995 54905289 -17248593 + AluSx SINE Alu 11 304 -8 4151 138 122 140 chr20 54905289 54905329 -17248553 + L1MC3 LINE L1 6657 6696 -1089 2120 115 0 14 chr20 54905329 54905462 -17248420 + AluSg SINE Alu 1 134 -171 2566 53 0 0 chr20 54905462 54905762 -17248120 + AluY SINE Alu 1 300 -11 2120 115 0 14 chr20 54905762 54905937 -17247945 + AluSg SINE Alu 134 305 0 4151 138 122 140 chr20 54905937 54906005 -17247877 + L1MC3 LINE L1 6696 6764 -1021 2416 77 0 10 chr20 54906005 54906304 -17247578 + AluSx SINE Alu 3 298 -14 2161 135 3 6 chr20 54906304 54906616 -17247266 + AluSx SINE Alu 1 311 -1 4151 138 122 140 chr20 54906305 54906738 -17247144 + L1MC3 LINE L1 6764 7203 -582 1833 171 7 16 chr20 54906738 54907042 -17246840 + AluJo SINE Alu 1 301 -11 4151 138 122 140 chr20 54907042 54907261 -17246621 + L1MC3 LINE L1 7203 7424 -361 1914 127 65 4 chr20 54907261 54907537 -17246345 - AluSx SINE Alu -19 293 1 4151 138 122 140 chr20 54907537 54907560 -17246322 + L1MC3 LINE L1 7424 7446 -339 251 306 0 12 chr20 54907560 54907645 -17246237 + MLT1F1 LTR MaLR 42 125 -442 4151 138 122 140 chr20 54907645 54907698 -17246184 + L1MC3 LINE L1 7446 7498 -287 2126 122 6 41 chr20 54907698 54908018 -17245864 - AluSx SINE Alu -3 309 1 4151 138 122 140 chr20 54908018 54908557 -17245325 + L1MC3 LINE L1 7498 7784 -1 1383 163 12 33 chr20 54908571 54908811 -17245071 + AluJo SINE Alu 1 235 -77 401 244 0 0 chr20 54908811 54908889 -17244993 + AluJo/FRAM SINE Alu 204 281 -31 2161 128 0 3 chr20 54909247 54909545 -17244337 - AluSx SINE Alu -11 301 5 695 172 0 97 chr20 54909552 54909697 -17244185 - FLAM_A SINE Alu -2 131 1 238 320 118 20 chr20 54909796 54909949 -17243933 - MIR3 SINE MIR -38 170 3 2421 69 3 3 chr20 54910354 54910644 -17243238 - AluSg SINE Alu -19 291 2 225 94 0 0 chr20 54914061 54914093 -17239789 + (A)n Simple_repeat Simple_repeat 1 32 0 189 0 0 0 chr20 54919530 54919551 -17234331 + (T)n Simple_repeat Simple_repeat 1 21 0 194 150 25 0 chr20 54920035 54920075 -17233807 + GA-rich Low_complexity Low_complexity 2 42 0 * 204 125 0 0 chr20 54920070 54920102 -17233780 + (A)n Simple_repeat Simple_repeat 1 32 0 333 145 16 0 chr20 54923398 54923460 -17230422 - MIR SINE MIR -80 128 66 509 133 0 33 chr20 54923628 54923718 -17230164 - AluJ/FRAM SINE Alu -9 303 217 219 191 179 36 chr20 54923750 54923834 -17230048 - MIR3 SINE MIR -13 195 100 1034 158 67 19 chr20 54923923 54924132 -17229750 + MER20 DNA MER1_type 1 219 0 760 143 84 113 chr20 54925095 54925298 -17228584 + MER20 DNA MER1_type 19 215 -4 312 324 9 37 chr20 54925302 54925410 -17228472 + L2 LINE L2 3148 3252 -20 613 233 40 136 chr20 54925411 54925543 -17228339 + L2 LINE L2 2594 2737 -577 2297 101 0 22 chr20 54925543 54925860 -17228022 - AluSg SINE Alu 0 310 1 2154 101 0 58 chr20 54925862 54926188 -17227694 - AluSx SINE Alu -5 307 1 613 233 40 136 chr20 54926188 54926456 -17227426 + L2 LINE L2 2738 2958 -356 617 320 77 8 chr20 54926714 54926948 -17226934 + MIR SINE MIR 13 262 0 358 213 57 66 chr20 54926957 54926970 -17226912 - MIR SINE MIR -24 238 226 2367 100 3 0 chr20 54926970 54927281 -17226601 - AluSx SINE Alu 0 312 1 358 213 57 66 chr20 54927281 54927389 -17226493 - MIR SINE MIR -36 226 118 2412 81 3 0 chr20 54927407 54927703 -17226179 - AluSx SINE Alu -13 299 3 2534 58 0 0 chr20 54927704 54927999 -17225883 - AluY SINE Alu -12 299 5 1153 207 3 83 chr20 54927999 54928140 -17225742 - AluJo SINE Alu -42 270 119 2317 90 10 22 chr20 54928140 54928451 -17225431 - AluSc SINE Alu 0 309 3 1153 207 3 83 chr20 54928451 54928484 -17225398 - AluJo SINE Alu -193 119 85 2568 63 3 0 chr20 54928484 54928786 -17225096 + AluSp SINE Alu 1 303 -10 1153 207 3 83 chr20 54928786 54928900 -17224982 - AluJo SINE Alu -227 85 4 280 219 243 101 chr20 54928913 54929082 -17224800 - L2 LINE L2 -245 3068 2876 1828 185 0 3 chr20 54929103 54929401 -17224481 + AluJo SINE Alu 1 297 -15 2273 107 10 3 chr20 54929403 54929713 -17224169 + AluSp SINE Alu 1 312 -1 1174 88 75 0 chr20 54929719 54929916 -17223966 + AluSg/x SINE Alu 120 328 0 2120 105 16 26 chr20 54929930 54930070 -17223812 + AluSq SINE Alu 1 141 -172 2200 115 0 7 chr20 54930070 54930374 -17223508 + AluSg SINE Alu 1 302 -8 2120 105 16 26 chr20 54930374 54930537 -17223345 + AluSq SINE Alu 141 301 -12 296 315 49 28 chr20 54930751 54930894 -17222988 + MIR SINE MIR 61 206 -56 1924 108 4 0 chr20 54930905 54931156 -17222726 + AluSx SINE Alu 53 304 -8 1143 134 0 18 chr20 54931156 54931327 -17222555 + AluSg/x SINE Alu 134 301 -11 2289 98 0 28 chr20 54931327 54931644 -17222238 + AluSx SINE Alu 1 308 -4 2305 87 0 29 chr20 54931675 54931986 -17221896 + AluSx SINE Alu 1 302 -10 194 308 15 31 chr20 54932077 54932142 -17221740 - L2 LINE L2 -3004 310 247 810 186 32 13 chr20 54932310 54932466 -17221416 - MIR SINE MIR -12 250 92 1881 148 81 100 chr20 54982943 54983056 -17170826 + LTR8A LTR ERV1 243 357 -370 1503 138 28 28 chr20 54983056 54983400 -17170482 + AluJo SINE Alu 1 344 0 1881 148 81 100 chr20 54983400 54983777 -17170105 + LTR8A LTR ERV1 357 725 -2 1559 191 0 17 chr20 54983811 54984110 -17169772 + AluJb SINE Alu 1 294 -18 352 143 0 0 chr20 54984263 54984312 -17169570 - MER66A LTR ERV1 -142 336 288 1077 169 15 30 chr20 54984314 54984515 -17169367 + MER20 DNA MER1_type 22 219 0 269 200 18 0 chr20 54984595 54984650 -17169232 + MER57A LTR ERV1 282 337 -66 284 237 36 72 chr20 54984669 54984820 -17169062 + LTR16A LTR ERVL 8 148 -302 792 199 46 83 chr20 54984838 54984955 -17168927 - MER20 DNA MER1_type -11 208 101 1476 87 14 23 chr20 54984955 54985174 -17168708 - AluSg/x SINE Alu -11 301 85 792 199 46 83 chr20 54985174 54985272 -17168610 - MER20 DNA MER1_type -118 101 1 484 283 43 1 chr20 54985276 54985494 -17168388 + LTR16A LTR ERVL 178 434 -16 325 322 19 9 chr20 54985511 54985628 -17168254 - MIR SINE MIR -81 127 8 1282 128 0 0 chr20 54985667 54985854 -17168028 - AluSg/x SINE Alu -15 295 109 337 111 19 0 chr20 54985856 54985910 -17167972 - AluS SINE Alu -245 57 3 893 149 0 0 chr20 54986194 54986328 -17167554 - FLAM_C SINE Alu -9 134 1 495 160 21 11 chr20 54986335 54986429 -17167453 - FLAM_C SINE Alu -3 140 46 820 148 0 15 chr20 54986617 54986752 -17167130 + AluJo/FLAM SINE Alu 1 133 -169 2409 68 0 7 chr20 54986752 54987062 -17166820 + AluSc SINE Alu 1 308 -1 271 208 60 13 chr20 54987101 54987250 -17166632 + (TA)n Simple_repeat Simple_repeat 1 156 0 201 235 35 24 chr20 54987217 54987302 -17166580 + (TATATG)n Simple_repeat Simple_repeat 5 90 0 * 578 188 10 0 chr20 54987337 54987438 -17166444 - MIR SINE MIR -98 164 63 1266 200 23 55 chr20 54987693 54987906 -17165976 - AluJo SINE Alu -12 300 99 2235 100 0 7 chr20 54987906 54988216 -17165666 - AluY SINE Alu -3 308 1 1266 200 23 55 chr20 54988216 54988312 -17165570 - AluJo SINE Alu -213 99 1 2340 71 0 3 chr20 54988361 54988658 -17165224 - AluY SINE Alu -15 296 1 1968 145 3 0 chr20 54989011 54989321 -17164561 + AluSx SINE Alu 2 312 0 344 206 23 0 chr20 54989424 54989557 -17164325 + GA-rich Low_complexity Low_complexity 1 136 0 2188 97 0 25 chr20 54989668 54989988 -17163894 + AluSx SINE Alu 1 312 0 1141 215 20 36 chr20 54989990 54990292 -17163590 + MLT1C LTR MaLR 171 467 0 1249 264 50 48 chr20 54990293 54990685 -17163197 + L1MC4a LINE L1 5402 5797 -2011 984 159 21 92 chr20 54990685 54990802 -17163080 - MER58A DNA MER1_type -2198 222 129 2109 110 3 0 chr20 54990802 54991093 -17162789 + AluSx SINE Alu 1 292 -20 984 159 21 92 chr20 54991093 54991214 -17162668 - MER58A DNA MER1_type -2291 129 1 1249 264 50 48 chr20 54991214 54991320 -17162562 + L1MC4a LINE L1 5797 5901 -1907 27 29 0 0 chr20 54991331 54991365 -17162517 + AT_rich Low_complexity Low_complexity 1 34 0 2076 133 0 0 chr20 54991693 54992001 -17161881 - AluSx SINE Alu -4 308 1 1077 152 43 105 chr20 54992002 54992278 -17161604 + MER58B DNA MER1_type 77 335 -6 2185 71 41 3 chr20 54992562 54992874 -17161008 - AluY SINE Alu 0 323 1 1972 118 0 0 chr20 54992928 54993208 -17160674 - AluSx SINE Alu -32 280 1 283 245 43 43 chr20 54993484 54993578 -17160304 + MER112 DNA MER1_type 6 99 -161 1479 202 13 7 chr20 54993582 54993884 -17159998 + AluJo SINE Alu 1 304 -8 2034 136 0 0 chr20 54993884 54994178 -17159704 - AluSx SINE Alu -18 294 1 2252 88 0 0 chr20 54994194 54994500 -17159382 - AluSg SINE Alu -4 306 1 475 256 164 27 chr20 54994500 54994752 -17159130 + L1MB7 LINE L1 5936 6152 -405 2182 110 0 22 chr20 54994752 54995071 -17158811 + AluSx SINE Alu 1 312 0 475 256 164 27 chr20 54995071 54995092 -17158790 + L1MB7 LINE L1 6152 6557 0 287 374 88 6 chr20 54995101 54995272 -17158610 - L3 LINE CR1 -1342 235 51 934 298 58 33 chr20 54995547 54995909 -17157973 + MLT1K LTR MaLR 18 388 -200 330 67 0 0 chr20 54995932 54995977 -17157905 + (TAAAAA)n Simple_repeat Simple_repeat 2 46 0 2268 76 3 10 chr20 54995986 54996288 -17157594 + AluSx SINE Alu 1 300 -12 1968 114 55 0 chr20 54996322 54996612 -17157270 + AluSx SINE Alu 1 306 -6 468 204 108 54 chr20 54996612 54996779 -17157103 + MLT1K LTR MaLR 387 562 -26 1997 132 6 3 chr20 54996802 54997113 -17156769 + AluSx SINE Alu 1 312 0 34 42 0 0 chr20 54997113 54997161 -17156721 + AT_rich Low_complexity Low_complexity 1 48 0 1094 237 77 109 chr20 54997167 54997230 -17156652 + MLT1J LTR MaLR 6 69 -442 1597 168 6 51 chr20 54997230 54997546 -17156336 - AluJb SINE Alu -10 302 1 1094 237 77 109 chr20 54997546 54997950 -17155932 + MLT1J LTR MaLR 69 458 -53 313 262 66 38 chr20 54997994 54998177 -17155705 - L1MC/D LINE L1 -2281 5527 5340 255 125 0 0 chr20 54998178 54998218 -17155664 + (TCCCC)n Simple_repeat Simple_repeat 4 43 0 437 235 44 66 chr20 54998240 54998254 -17155628 - MLT1K LTR MaLR -158 430 417 1468 180 32 3 chr20 54998254 54998537 -17155345 - AluJo SINE Alu -1 311 21 437 235 44 66 chr20 54998537 54998557 -17155325 - MLT1K LTR MaLR -171 417 398 2220 50 21 0 chr20 54998557 54998836 -17155046 - AluY SINE Alu -6 305 21 437 235 44 66 chr20 54998836 54998983 -17154899 - MLT1K LTR MaLR -190 398 252 293 173 29 101 chr20 54998987 54999080 -17154802 + L1M4 LINE L1 5186 5267 -879 2046 116 7 0 chr20 54999080 54999374 -17154508 + AluSx SINE Alu 1 296 -16 293 173 29 101 chr20 54999374 54999419 -17154463 + L1M4 LINE L1 5267 5314 -832 894 203 31 12 chr20 54999434 54999597 -17154285 + FAM SINE Alu 1 166 -9 2038 120 0 0 chr20 54999632 54999923 -17153959 + AluSg SINE Alu 1 291 -19 1674 169 10 7 chr20 54999923 55000223 -17153659 + AluJb SINE Alu 1 302 -10 2210 106 3 0 chr20 55000228 55000540 -17153342 + AluSp SINE Alu 1 313 0 321 67 0 33 chr20 55000546 55000605 -17153277 + L1MC1 LINE L1 5313 5366 -978 2297 88 0 0 chr20 55000606 55000903 -17152979 + AluSg SINE Alu 1 297 -13 204 125 0 0 chr20 55000903 55000935 -17152947 + (TA)n Simple_repeat Simple_repeat 1 32 0 2465 145 19 113 chr20 55000938 55001073 -17152809 + L1MC1 LINE L1 5341 5487 -857 1860 159 0 3 chr20 55001073 55001374 -17152508 - AluJb SINE Alu -12 300 1 2465 145 19 113 chr20 55001374 55001390 -17152492 + L1MC1 LINE L1 5487 5503 -841 2109 110 0 28 chr20 55001390 55001718 -17152164 - AluSc SINE Alu 0 319 1 2465 145 19 113 chr20 55001718 55002071 -17151811 + L1MC1 LINE L1 5503 5795 -549 1918 134 0 23 chr20 55002071 55002377 -17151505 + AluSx SINE Alu 1 299 -13 2465 145 19 113 chr20 55002377 55002436 -17151446 + L1MC1 LINE L1 5795 5858 -486 818 182 118 166 chr20 55002436 55002584 -17151298 - MSTB2 LTR MaLR 0 457 303 1507 181 24 24 chr20 55002584 55002720 -17151162 + AluJo SINE Alu 1 136 -166 1937 121 0 20 chr20 55002720 55002854 -17151028 + AluSc SINE Alu 1 136 -173 1647 119 29 74 chr20 55002854 55003166 -17150716 + AluSx SINE Alu 1 298 -14 1937 121 0 20 chr20 55003166 55003329 -17150553 + AluSc SINE Alu 136 292 -17 2118 109 0 13 chr20 55003330 55003662 -17150220 + AluSx SINE Alu 1 312 0 1507 181 24 24 chr20 55003662 55003815 -17150067 + AluJo SINE Alu 135 292 -10 1844 156 0 3 chr20 55003818 55004106 -17149776 + AluJo SINE Alu 1 287 -25 2217 106 0 0 chr20 55004116 55004428 -17149454 + AluSx SINE Alu 1 312 0 818 182 118 166 chr20 55004428 55004537 -17149345 - MSTB2 LTR MaLR -165 292 179 2147 90 24 0 chr20 55004537 55004825 -17149057 - AluSp SINE Alu -18 295 1 818 182 118 166 chr20 55004825 55005008 -17148874 - MSTB2 LTR MaLR -278 179 23 2334 159 26 46 chr20 55005015 55005436 -17148446 + L1MC1 LINE L1 5842 6270 -63 388 0 19 19 chr20 55005436 55005489 -17148393 + (TTTA)n Simple_repeat Simple_repeat 2 54 0 1986 108 7 0 chr20 55005492 55005771 -17148111 - AluSq SINE Alu -32 281 1 2007 141 0 0 chr20 55005773 55006070 -17147812 - AluSx SINE Alu -15 297 1 1548 181 24 20 chr20 55006074 55006367 -17147515 - AluJo SINE Alu -8 294 1 2334 159 26 46 chr20 55006367 55006430 -17147452 + L1MC1 LINE L1 6276 6328 -5 27 0 0 26 chr20 55006430 55006443 -17147439 + AT_rich Low_complexity Low_complexity 1 13 -24 2393 75 0 0 chr20 55006443 55006749 -17147133 - AluY SINE Alu -5 306 1 27 0 0 26 chr20 55006749 55006773 -17147109 + AT_rich Low_complexity Low_complexity 13 37 0 2101 108 0 7 chr20 55006773 55007068 -17146814 - AluSq SINE Alu -20 293 1 567 345 16 32 chr20 55007095 55007245 -17146637 - MLT1K LTR MaLR -334 254 108 1626 179 0 35 chr20 55007245 55007563 -17146319 + AluJo SINE Alu 1 307 -5 567 345 16 32 chr20 55007563 55007661 -17146221 - MLT1K LTR MaLR -480 108 10 262 244 0 58 chr20 55007821 55007907 -17145975 - L2 LINE L2 -19 3294 3214 252 143 0 0 chr20 55008503 55008545 -17145337 + (TA)n Simple_repeat Simple_repeat 1 42 0 2180 110 0 3 chr20 55008545 55008853 -17145029 - AluSx SINE Alu -5 307 1 1438 163 62 21 chr20 55008919 55009208 -17144674 - AluJb SINE Alu -7 305 5 417 303 34 0 chr20 55009322 55009441 -17144441 + MIR SINE MIR 56 178 -84 189 333 26 26 chr20 55009443 55009521 -17144361 - L2 LINE L2 0 3272 3195 889 161 0 19 chr20 55009612 55009767 -17144115 + FRAM SINE Alu 1 152 -14 1250 231 115 62 chr20 55009839 55010168 -17143714 - MLT1F LTR MaLR 0 542 175 2036 126 7 0 chr20 55010168 55010469 -17143413 + AluSx SINE Alu 1 303 -9 1250 231 115 62 chr20 55010469 55010654 -17143228 - MLT1F LTR MaLR -367 175 1 1758 149 0 38 chr20 55010681 55010996 -17142886 - AluJb SINE Alu -9 303 1 271 148 16 16 chr20 55011021 55011082 -17142800 + CT-rich Low_complexity Low_complexity 6 66 0 1732 160 6 28 chr20 55011090 55011409 -17142473 - AluJb SINE Alu 0 312 1 691 108 36 9 chr20 55011409 55011520 -17142362 + MER69 DNA AcHobo 2413 2526 0 1321 156 41 86 chr20 55012195 55012437 -17141445 - AluJb SINE Alu -12 300 74 1731 147 0 0 chr20 55012437 55012703 -17141179 - AluSx SINE Alu -29 283 18 1321 156 41 86 chr20 55012703 55012774 -17141108 - AluJb SINE Alu -238 74 1 353 275 57 67 chr20 55012862 55013055 -17140827 - MLT1H LTR MaLR -225 324 134 314 267 156 0 chr20 55013055 55013145 -17140737 + L2 LINE L2 3200 3303 -10 2183 105 0 3 chr20 55013273 55013579 -17140303 - AluSx SINE Alu -7 305 1 915 300 12 0 chr20 55013740 55013980 -17139902 + MIR SINE MIR 20 262 0 2212 116 3 0 chr20 55014278 55014588 -17139294 + AluSx SINE Alu 1 311 -1 594 221 28 121 chr20 55014630 55014739 -17139143 - L1MC5 LINE L1 -25 7936 7818 1737 157 0 47 chr20 55014739 55014879 -17139003 + AluJo SINE Alu 5 150 -162 1816 132 38 3 chr20 55014879 55015166 -17138716 + AluJb SINE Alu 1 297 -15 1737 157 0 47 chr20 55015166 55015344 -17138538 + AluJo SINE Alu 150 308 -4 594 221 28 121 chr20 55015344 55015523 -17138359 - L1MC5 LINE L1 -143 7818 7675 372 144 6 0 chr20 55015529 55015601 -17138281 + AluS SINE Alu 1 58 -242 1210 98 6 0 chr20 55015606 55015770 -17138112 + AluSg/x SINE Alu 136 300 -12 2305 179 81 7 chr20 55016037 55016472 -17137410 + MLT2B1 LTR ERVL 34 500 -20 640 103 52 34 chr20 55016473 55016523 -17137359 + (TCTA)n Simple_repeat Simple_repeat 1 49 -587 2000 113 0 0 chr20 55016523 55016798 -17137084 - AluSx SINE Alu -19 293 19 640 103 52 34 chr20 55016798 55017098 -17136784 + (TCTA)n Simple_repeat Simple_repeat 49 636 0 275 88 0 0 chr20 55017108 55017142 -17136740 - U2 snRNA snRNA -152 36 3 534 65 33 0 chr20 55017142 55017234 -17136648 + (TCTA)n Simple_repeat Simple_repeat 3 97 0 294 103 0 0 chr20 55017234 55017273 -17136609 + MLT2B1 LTR ERVL 482 520 0 202 298 0 18 chr20 55017332 55017389 -17136493 + MIR SINE MIR 102 157 -105 1317 116 124 9 chr20 55017399 55017624 -17136258 - AluSx SINE Alu -17 295 45 681 241 67 49 chr20 55017761 55017984 -17135898 - MER20B DNA MER1_type -251 532 306 2014 95 27 201 chr20 55017984 55018409 -17135473 - MSTC LTR MaLR 0 428 107 2112 113 10 7 chr20 55018409 55018718 -17135164 - AluSx SINE Alu -2 310 1 2014 95 27 201 chr20 55018718 55018810 -17135072 - MSTC LTR MaLR -321 107 1 1724 139 44 0 chr20 55018838 55019133 -17134749 + AluSx SINE Alu 1 308 -4 208 214 100 43 chr20 55019135 55019205 -17134677 - MIR SINE MIR -118 144 71 1745 138 21 7 chr20 55019310 55019626 -17134256 + AluSq SINE Alu 1 320 0 349 209 88 0 chr20 55019659 55019750 -17134132 + L1ME3 LINE L1 5590 5688 -476 1295 103 0 2 chr20 55019755 55019999 -17133883 + AluSx SINE Alu 2 301 -11 1367 192 83 21 chr20 55020001 55020209 -17133673 + L1ME3 LINE L1 5686 5924 -238 2079 118 0 0 chr20 55020209 55020505 -17133377 + AluSx SINE Alu 2 297 -15 1367 192 83 21 chr20 55020505 55020634 -17133248 + L1ME3 LINE L1 5924 6044 -118 1059 161 36 16 chr20 55020634 55020826 -17133056 + MER20 DNA MER1_type 24 219 0 359 242 57 14 chr20 55020959 55021260 -17132622 + MLT1J2 LTR MaLR 59 442 -8 235 304 43 26 chr20 55021542 55021657 -17132225 + MLT1K LTR MaLR 80 196 -392 1920 92 19 11 chr20 55021658 55021929 -17131953 - AluSx SINE Alu -39 273 1 555 298 78 46 chr20 55022292 55022574 -17131308 - MLT1L LTR MaLR -322 293 3 999 273 134 30 chr20 55022612 55022978 -17130904 - MLT1K LTR MaLR -23 565 162 833 167 87 7 chr20 55022989 55023139 -17130743 - FRAM SINE Alu 0 166 5 2643 133 89 50 chr20 55023183 55023701 -17130181 - MER50 LTR ERV1 -196 538 1 454 69 0 0 chr20 55023704 55023762 -17130120 + Alu SINE Alu 238 295 -17 243 299 0 0 chr20 55023762 55023829 -17130053 - MER113 DNA MER1_type? -454 67 1 1545 139 13 73 chr20 55023934 55024098 -17129784 - AluJb SINE Alu -28 284 145 2271 98 0 0 chr20 55024098 55024394 -17129488 - AluSg SINE Alu -14 296 1 1545 139 13 73 chr20 55024394 55024531 -17129351 - AluJb SINE Alu -167 145 1 1089 137 0 0 chr20 55025278 55025439 -17128443 - FRAM SINE Alu -19 157 1 339 85 0 0 chr20 55025728 55025775 -17128107 + (TTCC)n Simple_repeat Simple_repeat 3 49 0 2098 75 6 87 chr20 55025782 55026116 -17127766 - AluSc SINE Alu -2 307 1 233 294 168 0 chr20 55026121 55026240 -17127642 - L2 LINE L2 -1 3312 3174 460 208 137 81 chr20 55026343 55026540 -17127342 - Charlie8 DNA MER1_type -2142 275 68 2147 91 0 19 chr20 55026546 55026853 -17127029 + AluY SINE Alu 1 301 -10 2297 90 0 0 chr20 55026863 55027163 -17126719 + AluY SINE Alu 1 300 -11 1494 153 72 81 chr20 55027165 55027525 -17126357 - LTR8A LTR ERV1 -370 357 1 518 181 0 0 chr20 55027544 55027627 -17126255 + FAM SINE Alu 83 165 -20 2117 119 0 0 chr20 55027641 55027936 -17125946 + AluSx SINE Alu 1 295 -17 227 243 14 43 chr20 55027952 55028022 -17125860 - MER81 DNA DNA -8 106 39 * 286 169 34 34 chr20 55027983 55028042 -17125840 + MER81 DNA DNA 56 114 0 722 185 8 0 chr20 55028176 55028295 -17125587 + FLAM_C SINE Alu 3 122 -21 670 209 74 0 chr20 55028314 55028477 -17125405 - L1MD2 LINE L1 -21 6338 6164 838 126 0 0 chr20 55028477 55028596 -17125286 - AluSq/x SINE Alu -193 119 1 1573 176 52 127 chr20 55028596 55028845 -17125037 - L1MD2 LINE L1 -181 6178 5983 1965 100 33 0 chr20 55028845 55029115 -17124767 + AluSx SINE Alu 1 279 -33 1573 176 52 127 chr20 55029115 55029360 -17124522 - L1MD2 LINE L1 -376 5983 5721 891 167 95 0 chr20 55029360 55029528 -17124354 + MER58A DNA MER1_type 40 223 -1 675 243 141 0 chr20 55029529 55029706 -17124176 - MIR SINE MIR -46 216 15 2301 99 0 0 chr20 55029755 55030059 -17123823 + AluSq SINE Alu 1 304 -9 2164 103 7 0 chr20 55030320 55030622 -17123260 - AluSq SINE Alu -9 304 1 2437 74 0 0 chr20 55030783 55031093 -17122789 - AluY SINE Alu -1 310 1 354 243 0 0 chr20 55031152 55031222 -17122660 + MER81 DNA DNA 1 70 -44 1686 91 5 0 chr20 55031222 55031442 -17122440 - AluSx SINE Alu -91 221 1 414 160 0 13 chr20 55031442 55031517 -17122365 + L1MD1 LINE L1 5924 5997 -245 748 269 35 41 chr20 55031654 55031944 -17121938 - L1MEd LINE L1 -5825 294 7 2151 92 3 3 chr20 55032424 55032718 -17121164 - AluSp SINE Alu -19 294 1 245 132 0 0 chr20 55033014 55033052 -17120830 + MER113 DNA MER1_type? 3 40 -481 193 284 147 10 chr20 55033676 55033778 -17120104 + MIR3 SINE MIR 90 205 -3 1132 124 0 54 chr20 55033885 55033923 -17119959 + AluSg/x SINE Alu 103 142 -168 1985 142 0 0 chr20 55033923 55034219 -17119663 + AluSx SINE Alu 4 299 -13 1132 124 0 54 chr20 55034219 55034365 -17119517 + AluSg/x SINE Alu 142 277 -33 846 196 40 0 chr20 55034465 55034613 -17119269 - FRAM SINE Alu -24 152 1 1893 141 3 10 chr20 55034654 55034953 -17118929 + AluSx SINE Alu 12 308 -4 522 136 0 0 chr20 55034953 55035034 -17118848 - MER41A LTR ERV1 -113 441 361 338 130 0 0 chr20 55035035 55035089 -17118793 + Alu SINE Alu 249 302 0 837 175 19 13 chr20 55035174 55035328 -17118554 + MER4E LTR ERV1 218 372 -407 785 161 0 0 chr20 55035337 55035455 -17118427 - FLAM_C SINE Alu -22 121 4 1577 194 65 48 chr20 55035463 55035770 -17118112 + MER4E LTR ERV1 361 678 -101 1645 148 0 64 chr20 55035770 55035905 -17117977 + AluSx SINE Alu 1 108 -204 2134 126 0 0 chr20 55035905 55036215 -17117667 + AluSx SINE Alu 1 310 -2 1645 148 0 64 chr20 55036215 55036376 -17117506 + AluSx SINE Alu 108 278 -34 1577 194 65 48 chr20 55036376 55036480 -17117402 + MER4E LTR ERV1 678 779 0 446 192 0 50 chr20 55036480 55036579 -17117303 - L1MC4 LINE L1 -515 7527 7434 216 128 43 0 chr20 55036614 55036624 -17117258 + (TTTA)n Simple_repeat Simple_repeat 1 9 -40 2038 100 3 3 chr20 55036624 55036914 -17116968 + AluSq SINE Alu 1 290 -23 216 128 43 0 chr20 55036914 55036950 -17116932 + (TTTA)n Simple_repeat Simple_repeat 9 49 0 766 185 0 0 chr20 55037257 55037387 -17116495 + AluJo/FLAM SINE Alu 3 132 -170 2257 103 3 0 chr20 55037390 55037701 -17116181 + AluSx SINE Alu 1 312 0 1512 179 0 42 chr20 55037769 55038081 -17115801 + AluJo SINE Alu 1 299 -13 214 298 43 11 chr20 55038208 55038302 -17115580 - MIR3 SINE MIR -97 111 15 2005 93 24 7 chr20 55038714 55039003 -17114879 - AluSc SINE Alu -10 299 6 201 74 0 0 chr20 55039019 55039046 -17114836 + (CTAAT)n Simple_repeat Simple_repeat 5 31 0 1694 169 7 16 chr20 55039088 55039395 -17114487 + AluJo SINE Alu 1 304 -8 596 171 76 0 chr20 55039438 55039543 -17114339 + AluJb SINE Alu 2 114 -198 243 0 0 0 chr20 55039547 55039574 -17114308 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 981 129 11 7 chr20 55039592 55039863 -17114019 + CT-rich Low_complexity Low_complexity 3 449 0 1601 166 12 38 chr20 55039866 55040186 -17113696 - AluJo SINE Alu 0 312 1 1140 145 5 15 chr20 55040187 55040387 -17113495 + AluJb SINE Alu 105 302 -10 729 329 93 12 chr20 55040467 55040887 -17112995 + L2 LINE L2 2464 2917 -397 1629 177 10 16 chr20 55041055 55041233 -17112649 - AluSx SINE Alu -9 303 126 2174 109 3 6 chr20 55041233 55041546 -17112336 - AluSx SINE Alu 0 312 1 1629 177 10 16 chr20 55041546 55041672 -17112210 - AluSx SINE Alu -186 126 1 431 263 31 72 chr20 55041956 55042150 -17111732 + L2 LINE L2 3113 3298 -15 1273 176 3 96 chr20 55042158 55042334 -17111548 - AluJb SINE Alu -8 304 172 432 55 0 0 chr20 55042334 55042389 -17111493 + (TA)n Simple_repeat Simple_repeat 2 56 0 1273 176 3 96 chr20 55042389 55042547 -17111335 - AluJb SINE Alu -140 172 1 2166 95 0 7 chr20 55042549 55042844 -17111038 - AluSx SINE Alu -19 293 1 995 121 0 0 chr20 55042845 55042985 -17110897 - AluJb SINE Alu -170 142 3 686 120 30 0 chr20 55043014 55043114 -17110768 - U6 snRNA snRNA -3 104 2 222 266 0 85 chr20 55043242 55043380 -17110502 + MIR3 SINE MIR 33 160 -48 1109 213 94 67 chr20 55043382 55043717 -17110165 + MER113 DNA MER1_type? 3 352 -169 1720 163 0 10 chr20 55043717 55044023 -17109859 + AluJo SINE Alu 1 303 -9 1109 213 94 67 chr20 55044023 55044091 -17109791 + MER113 DNA MER1_type? 352 417 -104 2244 96 3 6 chr20 55044093 55044476 -17109406 + AluSq SINE Alu 1 382 0 835 129 0 43 chr20 55044487 55044626 -17109256 + AluJo SINE Alu 1 133 -169 233 248 29 29 chr20 55044704 55044777 -17109105 - MIR3 SINE MIR -47 161 88 970 170 0 28 chr20 55044888 55045070 -17108812 + AluJo SINE Alu 136 312 0 2169 84 3 7 chr20 55045084 55045380 -17108502 - AluSx SINE Alu -17 295 1 2032 75 4 7 chr20 55045389 55045694 -17108188 - AluY SINE Alu 0 311 13 748 269 35 41 chr20 55045915 55046205 -17107677 - L1MEd LINE L1 -5825 294 7 2269 69 7 0 chr20 55046685 55046976 -17106906 - AluSp SINE Alu -19 294 2 2324 82 0 16 chr20 55047157 55047475 -17106407 - AluSq SINE Alu 0 313 1 668 104 0 0 chr20 55047651 55047747 -17106135 - L1MA1 LINE L1 -9 6293 6198 2206 99 0 3 chr20 55047836 55048138 -17105744 + AluSx SINE Alu 1 301 -11 180 0 0 0 chr20 55048151 55048171 -17105711 + (TG)n Simple_repeat Simple_repeat 2 21 0 1545 142 51 44 chr20 55048298 55048593 -17105289 + AluJo SINE Alu 1 297 -15 2420 84 0 0 chr20 55048597 55048908 -17104974 + AluSx SINE Alu 1 311 -1 181 180 40 0 chr20 55048908 55048958 -17104924 + GA-rich Low_complexity Low_complexity 1 52 0 1761 134 72 7 chr20 55048966 55049257 -17104625 + AluSx SINE Alu 3 312 0 2369 81 3 0 chr20 55049259 55049568 -17104314 + AluSp SINE Alu 1 310 -3 1983 96 0 125 chr20 55049913 55050256 -17103626 - AluSq SINE Alu -3 300 1 596 135 0 0 chr20 55050339 55050435 -17103447 + L1MA1 LINE L1 6198 6293 -9 1955 139 13 0 chr20 55050626 55050927 -17102955 + AluSq SINE Alu 1 305 -8 1013 232 5 6 chr20 55051113 55051356 -17102526 - L1ME LINE L1 -444 5722 5491 216 0 0 0 chr20 55051358 55051382 -17102500 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2295 97 0 3 chr20 55051388 55051674 -17102208 + AluSq SINE Alu 1 287 -26 208 0 0 0 chr20 55051674 55051697 -17102185 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2295 97 0 3 chr20 55051697 55051709 -17102173 + AluSq SINE Alu 287 298 -15 682 140 0 10 chr20 55051718 55051818 -17102064 - U6 snRNA snRNA -7 100 2 436 252 48 91 chr20 55052571 55052781 -17101101 - MIR SINE MIR -1 261 61 568 174 10 0 chr20 55052859 55052957 -17100925 - AluJb SINE Alu -93 219 121 1464 156 4 16 chr20 55052991 55053234 -17100648 - AluJb SINE Alu -72 240 1 422 76 15 15 chr20 55053235 55053301 -17100581 - AluJb SINE Alu -176 136 71 807 155 0 0 chr20 55053387 55053516 -17100366 + AluJb SINE Alu 178 306 -6 1962 122 61 0 chr20 55053518 55053797 -17100085 + AluSg SINE Alu 1 296 -14 2192 116 0 3 chr20 55053797 55054098 -17099784 + AluSg SINE Alu 1 300 -10 364 266 8 48 chr20 55054109 55054233 -17099649 - L1MC4 LINE L1 -59 7983 7865 2164 128 20 0 chr20 55054414 55054720 -17099162 + AluSq SINE Alu 1 312 -1 298 211 22 44 chr20 55054742 55054832 -17099050 + T-rich Low_complexity Low_complexity 3 90 0 228 213 0 21 chr20 55054909 55054956 -17098926 + LTR67 LTR ERVL 512 557 0 186 289 88 18 chr20 55054979 55055093 -17098789 + L3 LINE CR1 1448 1569 -8 363 302 79 0 chr20 55055212 55055338 -17098544 - MLT1G1 LTR MaLR 0 555 420 33 18 0 36 chr20 55055342 55055375 -17098507 + AT_rich Low_complexity Low_complexity 1 33 -20 2471 88 3 0 chr20 55055375 55055681 -17098201 - AluSx SINE Alu -5 307 1 33 18 0 36 chr20 55055681 55055702 -17098180 + AT_rich Low_complexity Low_complexity 33 53 0 955 248 68 63 chr20 55055772 55055966 -17097916 - MLT1G1 LTR MaLR -192 398 207 2202 88 0 0 chr20 55055966 55056274 -17097608 - AluSx SINE Alu 0 318 11 955 248 68 63 chr20 55056274 55056406 -17097476 - MLT1G1 LTR MaLR -383 207 77 1986 142 0 3 chr20 55056564 55056853 -17097029 + AluSx SINE Alu 2 289 -23 319 163 20 0 chr20 55056859 55056908 -17096974 + FRAM SINE Alu 65 114 -52 1621 75 0 28 chr20 55056909 55057122 -17096760 + AluSp SINE Alu 95 301 -12 583 281 111 0 chr20 55057209 55057426 -17096456 - L2 LINE L2 -264 3049 2809 963 169 0 0 chr20 55057458 55057606 -17096276 - AluJb SINE Alu -30 282 135 409 281 0 91 chr20 55057609 55057667 -17096215 - L2 LINE L2 -534 2780 2718 2034 134 3 0 chr20 55057667 55057979 -17095903 - AluSq SINE Alu 0 313 1 409 281 0 91 chr20 55057979 55058118 -17095764 - L2 LINE L2 -596 2718 2600 38 0 0 0 chr20 55058168 55058206 -17095676 + AT_rich Low_complexity Low_complexity 1 38 0 1701 159 22 4 chr20 55058206 55058482 -17095400 - AluJo SINE Alu -27 285 5 2415 69 0 3 chr20 55058505 55058796 -17095086 - AluSq SINE Alu -23 290 1 2320 91 7 7 chr20 55058814 55059123 -17094759 - AluSp SINE Alu -4 309 1 882 281 134 20 chr20 55059137 55059725 -17094157 - L2 LINE L2 -135 3178 2530 1096 265 31 28 chr20 55059864 55060223 -17093659 - L1MC4a LINE L1 -307 7501 7142 319 229 288 0 chr20 55060250 55060368 -17093514 + MIR SINE MIR 111 262 0 218 192 0 19 chr20 55060645 55060697 -17093185 + (CGG)n Simple_repeat Simple_repeat 1 51 0 23 0 0 0 chr20 55060940 55060963 -17092919 + GC_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr20 55062925 55062953 -17090929 + AT_rich Low_complexity Low_complexity 1 28 0 225 0 0 0 chr20 55063212 55063237 -17090645 + (T)n Simple_repeat Simple_repeat 1 25 0 2240 92 0 7 chr20 55063256 55063551 -17090331 + AluSg SINE Alu 2 294 -16 22 35 0 0 chr20 55063623 55063652 -17090230 + AT_rich Low_complexity Low_complexity 1 29 0 234 0 0 0 chr20 55063737 55063763 -17090119 + (T)n Simple_repeat Simple_repeat 1 26 0 2345 102 7 0 chr20 55063783 55064088 -17089794 - AluSx SINE Alu 0 312 6 2369 93 0 10 chr20 55064526 55064838 -17089044 - AluSx SINE Alu -3 309 1 21 0 0 0 chr20 55066294 55066315 -17087567 + AT_rich Low_complexity Low_complexity 1 21 0 2192 105 3 3 chr20 55066344 55066652 -17087230 - AluSp SINE Alu 0 308 1 242 132 0 0 chr20 55066948 55066986 -17086896 + MER113 DNA MER1_type? 3 40 -481 180 284 99 12 chr20 55067610 55067691 -17086191 + MIR3 SINE MIR 90 177 -31 1701 160 36 18 chr20 55067850 55068131 -17085751 + AluJb SINE Alu 1 286 -26 804 156 0 23 chr20 55068359 55068487 -17085395 + FLAM_C SINE Alu 1 125 -18 2285 101 0 7 chr20 55068884 55069181 -17084701 + AluSg SINE Alu 1 295 -15 1468 183 44 0 chr20 55069341 55069614 -17084268 - AluJo SINE Alu -25 287 3 1127 174 17 26 chr20 55069968 55070198 -17083684 - AluJo SINE Alu 0 312 85 288 0 0 0 chr20 55070258 55070290 -17083592 + (TA)n Simple_repeat Simple_repeat 2 33 0 1653 115 12 16 chr20 55070294 55070538 -17083344 - AluSg SINE Alu -19 291 49 1034 181 88 0 chr20 55070547 55070762 -17083120 + L1PB4 LINE L1 5923 6156 0 526 252 16 8 chr20 55070768 55070895 -17082987 + FLAM_A SINE Alu 1 128 -5 24 53 0 0 chr20 55070899 55070937 -17082945 + AT_rich Low_complexity Low_complexity 1 38 0 1470 228 32 76 chr20 55070955 55071023 -17082859 + L1MC1 LINE L1 5260 5329 -837 2221 114 3 0 chr20 55071023 55071331 -17082551 + AluSc SINE Alu 1 309 0 1470 228 32 76 chr20 55071331 55071610 -17082272 + L1MC1 LINE L1 5329 5575 -591 1961 128 3 44 chr20 55071610 55071929 -17081953 + AluSx SINE Alu 1 306 -6 1470 228 32 76 chr20 55071929 55072145 -17081737 + L1MC1 LINE L1 5575 5799 -367 2085 141 13 0 chr20 55072178 55072482 -17081400 + AluSx SINE Alu 1 308 -4 326 245 117 0 chr20 55072564 55072658 -17081224 + L1ME3A LINE L1 6061 6165 -5 33 43 0 0 chr20 55072915 55072962 -17080920 + AT_rich Low_complexity Low_complexity 1 47 0 1713 142 21 21 chr20 55073130 55073411 -17080471 - AluSx SINE Alu -14 298 18 1757 136 111 7 chr20 55073440 55073719 -17080163 - AluSg1 SINE Alu -1 308 1 23 0 0 0 chr20 55073882 55073905 -17079977 + AT_rich Low_complexity Low_complexity 1 23 0 1887 116 35 25 chr20 55073905 55074190 -17079692 - AluSg SINE Alu -19 291 4 1828 145 29 23 chr20 55074204 55074514 -17079368 - AluSx SINE Alu 0 312 1 2897 161 46 13 chr20 55074555 55075095 -17078787 + L1MC1 LINE L1 5776 6333 0 1931 137 23 20 chr20 55075373 55075673 -17078209 + AluSx SINE Alu 1 301 -11 1960 131 25 0 chr20 55075676 55075950 -17077932 + AluSx SINE Alu 2 282 -30 2491 90 0 0 chr20 55076175 55076487 -17077395 - AluSx SINE Alu 0 312 1 1858 160 3 28 chr20 55076801 55077119 -17076763 + AluJo SINE Alu 1 310 -2 2325 94 3 19 chr20 55077145 55077463 -17076419 - AluSq SINE Alu 0 313 1 2321 102 0 0 chr20 55077597 55077892 -17075990 + AluSx SINE Alu 6 300 -12 2080 134 10 0 chr20 55077892 55078182 -17075700 + AluSx SINE Alu 1 294 -18 769 186 0 14 chr20 55078384 55078510 -17075372 + FLAM_C SINE Alu 1 126 -186 2089 110 10 7 chr20 55078510 55078800 -17075082 - AluSg SINE Alu -19 291 1 769 186 0 14 chr20 55078800 55078818 -17075064 + FLAM_C SINE Alu 126 143 -169 1673 120 40 40 chr20 55078827 55079152 -17074730 - LTR10A-int LTR ERV1 -7599 1027 703 281 187 121 77 chr20 55079147 55079238 -17074644 - LTR10A-int LTR ERV1 -5580 1069 975 * 1149 233 77 104 chr20 55079273 55080038 -17073844 - LTR10A-int LTR ERV1 -5954 695 3 2056 156 171 26 chr20 55080045 55080513 -17073369 - LTR10A LTR ERV1 -61 548 13 1233 210 31 7 chr20 55080550 55080841 -17073041 - L1M4 LINE L1 -1405 4741 4444 2385 65 7 13 chr20 55080841 55081148 -17072734 - AluY SINE Alu -6 305 1 3173 114 41 33 chr20 55081166 55081650 -17072232 - LTR9B LTR ERV1 -83 561 71 2353 61 14 0 chr20 55081650 55081943 -17071939 + AluY SINE Alu 1 297 -14 3173 114 41 33 chr20 55081943 55081974 -17071908 - LTR9B LTR ERV1 -573 71 42 4645 138 20 19 chr20 55081976 55082666 -17071216 - HUERS-P3b LTR ERV1 -2 7416 6726 1615 159 19 2 chr20 55082668 55082973 -17070909 - HUERS-P3 LTR ERV1 -7784 1135 746 852 152 48 7 chr20 55082978 55083123 -17070759 - HUERS-P3 LTR ERV1 -6859 559 409 468 165 41 52 chr20 55083126 55083223 -17070659 - HUERS-P3 LTR ERV1 -7322 96 1 1207 137 5 61 chr20 55083223 55083435 -17070447 - LTR9B LTR ERV1 0 644 445 928 241 88 42 chr20 55083437 55083496 -17070386 - L1M4 LINE L1 -1690 4456 4401 1815 104 42 110 chr20 55083496 55083670 -17070212 - AluSx SINE Alu -24 288 143 9271 20 3 276 chr20 55083670 55085575 -17068307 - SVA Other Other 0 1386 2 1815 104 42 110 chr20 55085575 55085709 -17068173 - AluSx SINE Alu -169 143 1 928 241 88 42 chr20 55085709 55086026 -17067856 - L1M4 LINE L1 -1745 4401 4063 1747 187 80 89 chr20 55086051 55086670 -17067212 - L1ME1 LINE L1 -198 5968 5318 264 221 29 0 chr20 55086773 55086841 -17067041 - L1ME1 LINE L1 -869 5277 5208 2234 95 27 3 chr20 55087537 55087833 -17066049 - AluSp SINE Alu -10 303 1 24 0 0 0 chr20 55087871 55087895 -17065987 + AT_rich Low_complexity Low_complexity 1 24 0 2082 107 52 0 chr20 55087895 55088184 -17065698 - AluSq SINE Alu -8 305 2 1947 135 21 0 chr20 55088195 55088477 -17065405 - AluSx SINE Alu -24 288 1 2228 115 0 7 chr20 55089228 55089532 -17064350 - AluSx SINE Alu -10 302 1 2028 114 0 18 chr20 55089823 55090103 -17063779 + AluSx SINE Alu 1 275 -37 252 0 0 0 chr20 55090107 55090135 -17063747 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 229 289 36 24 chr20 55090756 55090839 -17063043 - L2 LINE L2 -1 3312 3229 261 0 0 0 chr20 55090878 55090907 -17062975 + (TG)n Simple_repeat Simple_repeat 2 30 0 472 273 76 83 chr20 55090910 55091220 -17062662 - L2 LINE L2 -233 3080 2772 811 242 146 27 chr20 55091279 55091539 -17062343 - AluJo SINE Alu -10 292 2 2466 84 3 6 chr20 55091589 55091900 -17061982 + AluSx SINE Alu 1 310 -2 1195 134 0 12 chr20 55091900 55092072 -17061810 + AluSg/x SINE Alu 132 301 -9 421 186 131 55 chr20 55092121 55092266 -17061616 - L1ME4a LINE L1 0 6121 5966 806 194 60 119 chr20 55092308 55092415 -17061467 - L2 LINE L2 -572 2742 2630 1841 172 13 3 chr20 55092415 55092723 -17061159 + AluJo SINE Alu 1 311 -1 806 194 60 119 chr20 55092723 55092950 -17060932 - L2 LINE L2 -684 2630 2428 22 35 0 0 chr20 55093032 55093061 -17060821 + AT_rich Low_complexity Low_complexity 1 29 0 1613 191 3 3 chr20 55093401 55093683 -17060199 + AluSx SINE Alu 1 282 -30 21 36 0 0 chr20 55093788 55093816 -17060066 + AT_rich Low_complexity Low_complexity 1 28 0 705 154 8 62 chr20 55093835 55093965 -17059917 - AluJo SINE Alu -25 287 165 3436 172 38 57 chr20 55093965 55094275 -17059607 - LTR1 LTR ERV1 -54 731 417 2341 107 0 0 chr20 55094275 55094574 -17059308 - AluSc SINE Alu -10 299 1 3436 172 38 57 chr20 55094574 55095002 -17058880 - LTR1 LTR ERV1 -368 417 7 534 206 151 27 chr20 55095016 55095162 -17058720 - AluJo SINE Alu -147 165 2 693 170 7 37 chr20 55095425 55095560 -17058322 - FLAM_C SINE Alu -2 131 1 2452 74 6 22 chr20 55095566 55095877 -17058005 - AluSg SINE Alu -4 306 1 2148 110 0 13 chr20 55096351 55096650 -17057232 - AluY SINE Alu -16 295 1 2177 122 3 0 chr20 55096651 55096946 -17056936 - AluSq SINE Alu -15 298 3 2058 108 30 27 chr20 55097315 55097612 -17056270 - AluSg SINE Alu -12 298 1 641 163 16 142 chr20 55097940 55098130 -17055752 + FRAM SINE Alu 1 166 -10 489 254 34 0 chr20 55098136 55098254 -17055628 + L2 LINE L2 3188 3309 -4 307 217 0 0 chr20 55098447 55098507 -17055375 - HsTC2 DNA Tc2 -7 1891 1832 629 106 0 0 chr20 55098507 55098592 -17055290 - AluS SINE Alu -227 86 2 261 296 0 28 chr20 55098593 55098701 -17055181 - MER104 DNA Tc2 -47 133 29 243 277 69 0 chr20 55098725 55098826 -17055056 - MIR SINE MIR -54 208 101 2117 112 7 3 chr20 55099064 55099358 -17054524 + AluSq SINE Alu 5 299 -14 828 84 56 0 chr20 55100089 55100232 -17053650 + C-rich Low_complexity Low_complexity 4 154 0 934 146 0 127 chr20 55100235 55100455 -17053427 - AluJo SINE Alu -100 212 21 959 221 98 50 chr20 55100472 55100783 -17053099 - L1MC5 LINE L1 -186 7775 7433 1689 159 3 66 chr20 55100783 55101116 -17052766 - AluJo SINE Alu 0 312 1 959 221 98 50 chr20 55101116 55101265 -17052617 - L1MC5 LINE L1 -528 7433 7293 287 203 62 0 chr20 55101267 55101331 -17052551 - MLT1F LTR MaLR -2 565 498 488 211 0 11 chr20 55101331 55101426 -17052456 + FAM SINE Alu 25 118 -67 1783 159 10 13 chr20 55101457 55101758 -17052124 + AluJb SINE Alu 1 300 -12 1015 221 249 35 chr20 55101776 55102170 -17051712 - MLT1F LTR MaLR -64 478 1 2157 123 7 0 chr20 55102277 55102587 -17051295 - AluSx SINE Alu 0 312 1 444 240 80 27 chr20 55102587 55102737 -17051145 - L1MC5 LINE L1 -844 7117 6960 874 193 106 5 chr20 55102750 55102968 -17050914 - L1MD3 LINE L1 -5 7990 7751 809 202 89 0 chr20 55103094 55103262 -17050620 - AluJb SINE Alu -3 309 127 470 265 91 23 chr20 55103680 55103899 -17049983 - HAL1b LINE L1 -718 630 397 2256 123 0 0 chr20 55103952 55104254 -17049628 - AluSx SINE Alu -10 302 1 2034 138 0 0 chr20 55104510 55104792 -17049090 - AluJb SINE Alu -30 282 1 1196 296 185 20 chr20 55104813 55105305 -17048577 + L2 LINE L2 2255 2664 -649 2197 116 3 0 chr20 55105305 55105608 -17048274 - AluSp SINE Alu -9 304 1 1196 296 185 20 chr20 55105608 55106016 -17047866 + L2 LINE L2 2664 3312 -1 238 26 51 0 chr20 55106168 55106207 -17047675 + (TTA)n Simple_repeat Simple_repeat 2 42 0 2288 70 0 21 chr20 55106209 55106495 -17047387 - AluY SINE Alu -31 280 1 1935 127 42 0 chr20 55106497 55106660 -17047222 - AluSx SINE Alu -16 296 114 203 0 0 36 chr20 55106660 55106688 -17047194 + (TTTTA)n Simple_repeat Simple_repeat 2 28 0 1935 127 42 0 chr20 55106688 55106808 -17047074 - AluSx SINE Alu -198 114 1 2339 103 0 3 chr20 55107037 55107349 -17046533 + AluSq SINE Alu 1 311 -2 823 151 8 8 chr20 55107820 55107946 -17045936 - AluJb SINE Alu -179 133 8 1554 161 0 117 chr20 55108016 55108358 -17045524 + AluJo SINE Alu 1 302 0 262 135 0 58 chr20 55108359 55108411 -17045471 - L1MC5 LINE L1 -592 7369 7321 1850 164 3 13 chr20 55108472 55108776 -17045106 - AluJb SINE Alu -5 307 7 22 0 0 0 chr20 55108910 55108932 -17044950 + AT_rich Low_complexity Low_complexity 1 22 0 2436 83 3 0 chr20 55108943 55109244 -17044638 + AluSp SINE Alu 3 304 -9 1183 205 221 27 chr20 55109299 55110101 -17043781 + Charlie2 DNA MER1_type 1862 2850 -12 1901 158 0 16 chr20 55111710 55112014 -17041868 - AluJb SINE Alu -13 299 1 8123 23 3 0 chr20 55112171 55113254 -17040628 - L1PA4 LINE L1 0 6155 5078 5589 25 1 0 chr20 55113254 55113903 -17039979 + L1P LINE L1 4257 4906 -1240 237 331 105 23 chr20 55114093 55114226 -17039656 + MIR3 SINE MIR 3 146 -62 2503 65 0 13 chr20 55114412 55114721 -17039161 - AluY SINE Alu -6 305 1 1950 147 27 0 chr20 55114721 55115014 -17038868 - AluSx SINE Alu -11 301 1 1489 143 0 5 chr20 55115296 55115520 -17038362 - AluSg/x SINE Alu -6 304 82 298 309 44 49 chr20 55115827 55116031 -17037851 - L1ME LINE L1 -388 5733 5531 849 251 52 26 chr20 55116083 55116314 -17037568 - MIR SINE MIR -12 250 14 1739 164 69 17 chr20 55116637 55116831 -17037051 - MLT1B LTR MaLR -11 379 158 2066 91 6 79 chr20 55116831 55117161 -17036721 - AluSp SINE Alu -7 306 1 1739 164 69 17 chr20 55117161 55117313 -17036569 - MLT1B LTR MaLR -232 158 15 6676 104 29 45 chr20 55117326 55118382 -17035500 - Tigger2 DNA MER2_type -517 2201 1163 882 132 0 0 chr20 55118385 55118514 -17035368 + FLAM_C SINE Alu 7 135 -8 1314 164 5 5 chr20 55118517 55118731 -17035151 - AluSx SINE Alu -98 214 1 745 203 0 15 chr20 55118733 55118866 -17035016 - AluJo/FLAM SINE Alu -171 131 1 1983 132 17 0 chr20 55118870 55119157 -17034725 - AluSx SINE Alu -20 292 1 1981 169 76 8 chr20 55119158 55119604 -17034278 - L1MC/D LINE L1 -743 5403 5198 763 92 92 8 chr20 55119615 55119746 -17034136 - L1PB2 LINE L1 0 6151 6010 1694 171 16 26 chr20 55119746 55120055 -17033827 - AluJb SINE Alu -6 306 1 1660 155 0 88 chr20 55120058 55120400 -17033482 - AluJo SINE Alu 0 312 1 5193 138 73 18 chr20 55120405 55121319 -17032563 - L1MC1 LINE L1 -15 6318 5354 767 177 0 31 chr20 55121698 55121828 -17032054 - FLAM_C SINE Alu -17 126 1 896 194 29 6 chr20 55122089 55122264 -17031618 + L1MC1 LINE L1 6142 6320 -13 313 208 0 0 chr20 55122332 55122385 -17031497 + AluJb SINE Alu 1 53 -248 2237 121 0 6 chr20 55122387 55122701 -17031181 + AluSx SINE Alu 1 312 0 1514 145 52 8 chr20 55122703 55122951 -17030931 + AluJb SINE Alu 44 302 -10 251 303 83 18 chr20 55122961 55123179 -17030703 - L1ME4a LINE L1 -137 5984 5753 313 246 118 27 chr20 55123179 55123289 -17030593 - L2 LINE L2 -8 3305 3186 299 255 121 7 chr20 55123519 55123668 -17030214 - L1P5 LINE L1 -721 5430 5265 2102 120 3 0 chr20 55123772 55124063 -17029819 - AluSq SINE Alu -21 292 1 204 265 101 53 chr20 55124142 55124215 -17029667 - MIR SINE MIR -17 191 123 1689 185 0 23 chr20 55124215 55124518 -17029364 + AluJb SINE Alu 1 296 -16 204 265 101 53 chr20 55124518 55124598 -17029284 - MIR SINE MIR -85 123 28 1457 102 205 8 chr20 55124761 55125005 -17028877 - AluSg1 SINE Alu -17 292 1 1759 174 7 0 chr20 55125299 55125592 -17028290 - AluJb SINE Alu -17 295 1 727 191 40 0 chr20 55125620 55125746 -17028136 + FLAM_A SINE Alu 1 131 -2 495 0 0 0 chr20 55125795 55125850 -17028032 + (TATG)n Simple_repeat Simple_repeat 2 56 0 2290 93 0 0 chr20 55125850 55126130 -17027752 - AluSc SINE Alu -27 282 3 1417 185 22 51 chr20 55126173 55126355 -17027527 - AluJo SINE Alu -5 307 136 2275 106 0 3 chr20 55126355 55126657 -17027225 - AluSq SINE Alu -12 301 1 1417 185 22 51 chr20 55126657 55126788 -17027094 - AluJo SINE Alu -176 136 3 895 130 49 12 chr20 55127146 55127308 -17026574 - Tigger1 DNA MER2_type -34 2384 2217 472 182 136 9 chr20 55127309 55127419 -17026463 + FLAM_C SINE Alu 1 124 -9 1030 171 0 18 chr20 55127425 55127595 -17026287 + AluSg/x SINE Alu 127 293 -17 739 184 14 7 chr20 55127595 55127736 -17026146 - Tigger1 DNA MER2_type -196 2222 2081 801 158 8 0 chr20 55127743 55127863 -17026019 - AluSg/x SINE Alu -16 294 174 325 73 0 0 chr20 55127865 55127906 -17025976 + AluJ/FLAM SINE Alu 46 86 -216 1506 145 0 4 chr20 55127906 55128133 -17025749 + AluJb SINE Alu 57 282 -30 24 32 0 0 chr20 55128153 55128184 -17025698 + AT_rich Low_complexity Low_complexity 1 31 0 2008 116 11 14 chr20 55128184 55128469 -17025413 + AluSx SINE Alu 1 284 -28 6501 112 199 153 chr20 55128485 55128515 -17025367 - Tigger1 DNA MER2_type -463 1955 1928 2433 76 0 3 chr20 55128515 55128819 -17025063 + AluY SINE Alu 1 303 -8 6501 112 199 153 chr20 55128819 55128964 -17024918 - Tigger1 DNA MER2_type -490 1928 1791 1790 137 70 0 chr20 55128964 55129234 -17024648 + AluJb SINE Alu 1 289 -23 6501 112 199 153 chr20 55129234 55129727 -17024155 - Tigger1 DNA MER2_type -627 1791 1322 279 0 0 0 chr20 55129727 55129758 -17024124 + (CA)n Simple_repeat Simple_repeat 2 32 0 6501 112 199 153 chr20 55129758 55129798 -17024084 - Tigger1 DNA MER2_type -1096 1322 1285 2198 126 0 0 chr20 55129798 55130092 -17023790 - AluSx SINE Alu -18 294 1 1806 134 0 0 chr20 55130094 55130355 -17023527 - AluSx SINE Alu -1 311 51 6501 112 199 153 chr20 55130355 55130499 -17023383 - Tigger1 DNA MER2_type -1133 1285 1149 1802 149 3 48 chr20 55130499 55130815 -17023067 - AluJb SINE Alu -10 302 1 6501 112 199 153 chr20 55130815 55131084 -17022798 - Tigger1 DNA MER2_type -1269 1149 894 724 159 0 24 chr20 55131084 55131210 -17022672 + FRAM SINE Alu 42 164 -12 6501 112 199 153 chr20 55131210 55131332 -17022550 - Tigger1 DNA MER2_type -1524 894 779 1933 151 7 0 chr20 55131332 55131624 -17022258 - AluSx SINE Alu -18 294 1 6501 112 199 153 chr20 55131624 55131904 -17021978 - Tigger1 DNA MER2_type -1639 779 513 1913 125 21 28 chr20 55131904 55132217 -17021665 + AluSx SINE Alu 1 311 0 6501 112 199 153 chr20 55132217 55132427 -17021455 - Tigger1 DNA MER2_type -1905 513 1 23 54 0 0 chr20 55133333 55133370 -17020512 + AT_rich Low_complexity Low_complexity 1 37 0 298 281 56 11 chr20 55136278 55136367 -17017515 + L2 LINE L2 3175 3267 -5 187 286 167 24 chr20 55136429 55136513 -17017369 + L2 LINE L2 3168 3263 -9 2286 94 0 0 chr20 55136985 55137273 -17016609 - AluSx SINE Alu -24 288 1 615 227 36 0 chr20 55137947 55138057 -17015825 - FLAM_A SINE Alu -19 114 1 1350 205 143 17 chr20 55138507 55138883 -17014999 - LTR45B LTR ERV1 0 619 72 2010 103 33 7 chr20 55139070 55139343 -17014539 + AluSx SINE Alu 1 280 -32 1922 162 3 13 chr20 55139606 55139909 -17013973 + AluJb SINE Alu 1 300 -12 1113 134 94 5 chr20 55139914 55140115 -17013767 + Tigger4(Zombi) DNA MER2_type 2511 2729 -2 198 0 0 0 chr20 55140984 55141006 -17012876 + (TTAA)n Simple_repeat Simple_repeat 1 22 0 1963 139 3 3 chr20 55141012 55141300 -17012582 - AluSq SINE Alu -25 288 1 865 151 0 22 chr20 55141315 55141454 -17012428 - AluJo SINE Alu -176 136 1 2039 128 3 0 chr20 55141593 55141881 -17012001 - AluSx SINE Alu -23 289 1 1454 159 13 0 chr20 55142228 55142461 -17011421 - Tigger2a DNA MER2_type 0 434 199 1617 206 7 7 chr20 55142461 55142771 -17011111 + AluJb SINE Alu 1 310 -2 1419 194 11 11 chr20 55142814 55143082 -17010800 + AluJo SINE Alu 15 282 -30 189 74 0 0 chr20 55143086 55143113 -17010769 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 2299 117 0 0 chr20 55143125 55143423 -17010459 + AluSx SINE Alu 1 298 -14 928 138 56 56 chr20 55143424 55143619 -17010263 - Tigger2a DNA MER2_type -232 202 8 2073 121 34 0 chr20 55143834 55144131 -17009751 - AluSx SINE Alu -5 307 1 2180 99 27 0 chr20 55144714 55145006 -17008876 - AluSx SINE Alu -12 300 1 2245 246 89 51 chr20 55145016 55146097 -17007785 - L1MD3 LINE L1 0 8041 6934 1455 227 108 112 chr20 55146066 55146215 -17007667 - L1MC4a LINE L1 -1060 6748 6600 * 192 77 0 0 chr20 55146215 55146241 -17007641 + (CATATA)n Simple_repeat Simple_repeat 3 28 0 1013 224 140 26 chr20 55146247 55146555 -17007327 + MER2 DNA MER2_type 1 343 -1 1455 227 108 112 chr20 55146555 55146919 -17006963 - L1MC4a LINE L1 -1213 6595 6231 2080 122 20 0 chr20 55146919 55147222 -17006660 - AluSx SINE Alu -3 309 1 1455 227 108 112 chr20 55147222 55147639 -17006243 - L1MC4a LINE L1 -1577 6231 5814 1962 134 0 33 chr20 55147679 55147986 -17005896 - AluSq SINE Alu -16 297 1 380 238 205 0 chr20 55148009 55148160 -17005722 - L1MC4a LINE L1 -1208 4938 4757 1905 152 3 0 chr20 55148166 55148462 -17005420 - AluSx SINE Alu -15 297 1 576 243 101 41 chr20 55148464 55148682 -17005200 - MER31-int LTR ERV1 -832 4104 3874 27 0 0 0 chr20 55148721 55148748 -17005134 + AT_rich Low_complexity Low_complexity 1 27 0 720 199 0 46 chr20 55148762 55148893 -17004989 - AluJb SINE Alu -186 126 2 913 200 19 0 chr20 55149111 55149266 -17004616 - FRAM SINE Alu -5 161 4 1204 160 0 46 chr20 55149391 55149615 -17004267 + AluJb SINE Alu 84 298 -14 2055 147 3 3 chr20 55149615 55149927 -17003955 + AluSx SINE Alu 1 312 0 1204 160 0 46 chr20 55149927 55149939 -17003943 + AluJb SINE Alu 298 309 -3 1215 272 62 38 chr20 55150282 55150833 -17003049 - L1ME LINE L1 -4602 2005 1389 2146 110 3 10 chr20 55150833 55151132 -17002750 - AluSq SINE Alu -16 297 1 1215 272 62 38 chr20 55151132 55151279 -17002603 - L1ME LINE L1 -5218 1389 1247 248 315 14 14 chr20 55151336 55151409 -17002473 - MIR SINE MIR -86 122 50 2148 104 7 3 chr20 55151731 55152020 -17001862 - AluSq SINE Alu -23 290 1 2508 49 10 7 chr20 55152122 55152430 -17001452 - AluY SINE Alu -2 309 1 2442 92 0 6 chr20 55153168 55153482 -17000400 + AluSx SINE Alu 1 312 0 515 119 0 0 chr20 55153509 55153576 -17000306 + AluS SINE Alu 2 68 -245 2165 122 7 0 chr20 55153576 55153879 -17000003 - AluSq SINE Alu -8 305 1 2117 108 10 7 chr20 55153891 55154187 -16999695 - AluSx SINE Alu -15 297 1 21 0 0 0 chr20 55154461 55154482 -16999400 + AT_rich Low_complexity Low_complexity 1 21 0 563 238 26 117 chr20 55154490 55154721 -16999161 + MIR SINE MIR 15 224 -38 21 57 0 0 chr20 55154787 55154822 -16999060 + AT_rich Low_complexity Low_complexity 1 35 0 272 313 75 0 chr20 55155101 55155261 -16998621 - L1ME LINE L1 -300 5862 5691 1696 148 10 34 chr20 55155369 55155667 -16998215 - AluJb SINE Alu -11 301 11 709 249 58 29 chr20 55155819 55156060 -16997822 - L1ME1 LINE L1 -5 6161 5914 * 1215 158 58 42 chr20 55156057 55156270 -16997612 - L1ME LINE L1 -5160 1266 1045 2217 92 0 26 chr20 55156270 55156576 -16997306 - AluSx SINE Alu -14 298 1 1215 158 58 42 chr20 55156576 55156692 -16997190 - L1ME LINE L1 -5381 1045 932 2451 69 0 7 chr20 55156752 55157057 -16996825 + AluY SINE Alu 2 304 -7 2309 99 0 3 chr20 55157121 55157424 -16996458 - AluSx SINE Alu -10 302 1 1789 175 48 92 chr20 55157463 55157626 -16996256 + L1MB8 LINE L1 5660 5829 -349 1755 161 35 35 chr20 55157626 55157974 -16995908 + MER7A DNA MER2_type 1 346 0 1789 175 48 92 chr20 55157974 55158353 -16995529 + L1MB8 LINE L1 5829 6178 0 315 0 0 0 chr20 55158898 55158933 -16994949 + (TG)n Simple_repeat Simple_repeat 2 36 0 25 0 0 0 chr20 55158933 55158958 -16994924 + AT_rich Low_complexity Low_complexity 1 25 0 2283 98 0 7 chr20 55158958 55159263 -16994619 - AluY SINE Alu -8 303 1 1558 184 14 4 chr20 55159324 55159602 -16994280 - AluJb SINE Alu -30 282 2 785 263 192 8 chr20 55159833 55160187 -16993695 - MSTB2 LTR MaLR -38 419 1 4167 138 107 7 chr20 55162059 55162808 -16991074 - LTR1B LTR ERV1 -2 824 1 316 252 126 44 chr20 55162944 55163103 -16990779 - MIR SINE MIR -12 250 79 743 164 0 0 chr20 55163409 55163525 -16990357 - FLAM_C SINE Alu -17 116 1 2299 92 0 7 chr20 55163647 55163953 -16989929 - AluSc SINE Alu -5 304 1 23 68 0 0 chr20 55164207 55164251 -16989631 + AT_rich Low_complexity Low_complexity 1 44 0 185 150 0 25 chr20 55164745 55164785 -16989097 + (CTTA)n Simple_repeat Simple_repeat 1 39 0 769 206 27 0 chr20 55164785 55164931 -16988951 - AluJo SINE Alu -162 150 1 3597 194 37 38 chr20 55165016 55165966 -16987916 + Charlie1a DNA MER1_type 2 950 -505 3051 90 66 32 chr20 55165963 55166496 -16987386 + MER34C LTR ERV1 35 585 0 * 1216 210 126 18 chr20 55166497 55166817 -16987065 + Charlie1a DNA MER1_type 947 1231 -1530 2225 113 3 22 chr20 55166817 55167136 -16986746 + AluSq SINE Alu 1 313 0 1972 144 0 7 chr20 55167143 55167448 -16986434 + AluJo SINE Alu 1 303 -9 1216 210 126 18 chr20 55167448 55167572 -16986310 + Charlie1a DNA MER1_type 1236 1448 -7 216 273 55 55 chr20 55167930 55168040 -16985842 + L2 LINE L2 3155 3264 -49 1739 114 0 4 chr20 55168295 55168531 -16985351 + AluSg SINE Alu 61 295 -15 30 45 0 0 chr20 55168589 55168633 -16985249 + AT_rich Low_complexity Low_complexity 1 44 0 1776 178 18 0 chr20 55169026 55169307 -16984575 - AluJo SINE Alu -26 286 1 1946 122 0 0 chr20 55170310 55170604 -16983278 + AluSx SINE Alu 14 307 0 1630 167 0 14 chr20 55170632 55170914 -16982968 - AluJo SINE Alu -34 278 1 2363 77 17 7 chr20 55172418 55172718 -16981164 + AluSg SINE Alu 1 303 -7 297 268 177 32 chr20 55173834 55174010 -16979872 + MIR SINE MIR 36 230 -32 1892 100 4 4 chr20 55174668 55174919 -16978963 + AluSq SINE Alu 6 256 -57 21 36 0 0 chr20 55174919 55174947 -16978935 + GC_rich Low_complexity Low_complexity 1 28 0 2290 89 7 0 chr20 55174988 55175280 -16978602 - AluSq SINE Alu -19 294 1 2322 93 0 3 chr20 55175743 55176043 -16977839 - AluSx SINE Alu -13 299 1 2130 132 7 3 chr20 55176742 55177045 -16976837 + AluSx SINE Alu 1 304 -8 2214 121 7 3 chr20 55177136 55177441 -16976441 - AluSp SINE Alu -7 306 1 2184 135 0 0 chr20 55178150 55178453 -16975429 + AluJb SINE Alu 1 303 -9 2315 89 0 3 chr20 55178579 55178881 -16975001 - AluSg SINE Alu -9 301 1 21 36 0 0 chr20 55178882 55178910 -16974972 + AT_rich Low_complexity Low_complexity 1 28 0 1106 232 19 19 chr20 55178911 55179174 -16974708 - AluJo SINE Alu -25 287 25 844 234 55 81 chr20 55179242 55179747 -16974135 - L1MC4 LINE L1 -1 8041 7550 225 184 0 0 chr20 55180014 55180063 -16973819 + T-rich Low_complexity Low_complexity 1 49 0 2087 93 6 75 chr20 55180442 55180763 -16973119 - AluSq SINE Alu -13 300 2 1017 171 189 72 chr20 55181398 55181801 -16972081 - LTR7 LTR ERV1 0 450 1 266 239 233 20 chr20 55182093 55182209 -16971673 - MIR SINE MIR -66 142 35 2122 129 0 3 chr20 55182293 55182595 -16971287 + AluSq SINE Alu 1 301 -12 3467 139 0 11 chr20 55182904 55183435 -16970447 - MER1A DNA MER1_type -2 525 1 2218 122 0 0 chr20 55183549 55183860 -16970022 - AluSx SINE Alu -1 311 1 1000 184 34 15 chr20 55184661 55184867 -16969015 - MER2 DNA MER2_type -135 210 1 1281 179 125 34 chr20 55185412 55185763 -16968119 - MLT1B LTR MaLR -7 383 1 21 0 0 0 chr20 55187040 55187061 -16966821 + AT_rich Low_complexity Low_complexity 1 21 0 2235 126 0 0 chr20 55187197 55187499 -16966383 - AluSx SINE Alu -10 302 1 225 279 73 50 chr20 55187701 55187817 -16966065 - MIR SINE MIR -62 146 21 2327 87 3 10 chr20 55188119 55188418 -16965464 - AluSq SINE Alu -16 297 1 2456 82 0 0 chr20 55189245 55189549 -16964333 - AluY SINE Alu -7 304 1 1519 231 105 96 chr20 55190698 55191169 -16962713 - MER21B LTR ERV1 -60 803 338 2310 109 0 7 chr20 55191169 55191473 -16962409 - AluSg SINE Alu -8 302 1 2207 107 0 0 chr20 55191477 55191768 -16962114 - AluSc SINE Alu -18 291 1 1519 231 105 96 chr20 55191768 55192071 -16961811 - MER21B LTR ERV1 -527 336 17 675 224 8 0 chr20 55192456 55192581 -16961301 - FLAM_A SINE Alu -6 127 2 208 250 36 0 chr20 55193646 55193702 -16960180 + CT-rich Low_complexity Low_complexity 2 59 0 1931 172 0 16 chr20 55193702 55194016 -16959866 - AluJo SINE Alu -3 309 1 28 0 0 0 chr20 55194018 55194046 -16959836 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr20 55196751 55196774 -16957108 + AT_rich Low_complexity Low_complexity 1 23 0 1203 134 0 0 chr20 55197041 55197220 -16956662 + AluSg/x SINE Alu 127 305 -7 2260 79 0 26 chr20 55199386 55199690 -16954192 + AluY SINE Alu 1 296 -15 909 146 61 12 chr20 55200108 55200272 -16953610 - AluJb SINE Alu -5 307 136 2330 72 16 0 chr20 55200278 55200582 -16953300 - AluY SINE Alu -2 309 1 2213 107 0 10 chr20 55201703 55202001 -16951881 - AluSx SINE Alu -17 295 1 1067 264 94 14 chr20 55202386 55202905 -16950977 - HAL1 LINE L1 -716 1791 1231 2451 49 0 33 chr20 55202932 55203236 -16950646 - AluY SINE Alu -17 294 1 418 260 79 8 chr20 55203311 55203438 -16950444 - HAL1 LINE L1 -1629 878 743 2365 84 0 0 chr20 55203484 55203783 -16950099 - AluSg SINE Alu -11 299 1 46 33 0 0 chr20 55203903 55203963 -16949919 + AT_rich Low_complexity Low_complexity 1 60 0 473 163 0 0 chr20 55204508 55204585 -16949297 + FLAM_A SINE Alu 1 74 -58 420 285 119 77 chr20 55204590 55204818 -16949064 - L2 LINE L2 -655 2659 2442 1813 175 11 29 chr20 55204818 55205166 -16948716 + MER2 DNA MER2_type 3 344 0 420 285 119 77 chr20 55205166 55205484 -16948398 - L2 LINE L2 -872 2442 2090 286 237 0 53 chr20 55205701 55205777 -16948105 + L2 LINE L2 3242 3313 0 2112 107 37 3 chr20 55206693 55206992 -16946890 - AluSx SINE Alu -3 309 1 1624 162 73 0 chr20 55207264 55207536 -16946346 - AluJb SINE Alu -4 308 17 278 263 0 25 chr20 55207913 55207993 -16945889 + L2 LINE L2 3194 3271 -1 2063 120 31 0 chr20 55209047 55209338 -16944544 - AluSq SINE Alu -13 300 1 2057 125 14 0 chr20 55209370 55209659 -16944223 + AluSx SINE Alu 1 293 -19 657 69 0 0 chr20 55209858 55209945 -16943937 + (CAG)n Simple_repeat Simple_repeat 3 89 0 2112 100 7 17 chr20 55210452 55210753 -16943129 - AluY SINE Alu -13 298 1 198 0 0 0 chr20 55212156 55212178 -16941704 + (T)n Simple_repeat Simple_repeat 1 22 0 309 51 0 0 chr20 55213636 55213675 -16940207 + (TG)n Simple_repeat Simple_repeat 2 40 0 35 24 0 0 chr20 55214540 55214582 -16939300 + AT_rich Low_complexity Low_complexity 1 42 0 31 0 0 0 chr20 55214943 55214974 -16938908 + AT_rich Low_complexity Low_complexity 1 31 0 216 0 0 0 chr20 55215675 55215699 -16938183 + (T)n Simple_repeat Simple_repeat 1 24 0 249 240 219 0 chr20 55218955 55219051 -16934831 + MIR SINE MIR 120 236 -26 817 201 6 6 chr20 55219398 55219557 -16934325 - FRAM SINE Alu -5 161 3 281 286 263 20 chr20 55219720 55220017 -16933865 + L2 LINE L2 2558 2926 -388 353 268 127 7 chr20 55221196 55221338 -16932544 + Charlie8 DNA MER1_type 63 221 -2196 341 216 0 14 chr20 55223413 55223444 -16930438 + MER3 DNA MER1_type 18 47 -162 750 190 161 6 chr20 55223444 55223618 -16930264 - MER3 DNA MER1_type 0 209 9 1731 182 42 20 chr20 55225542 55225943 -16927939 + L1MB5 LINE L1 5765 6174 0 304 295 21 0 chr20 55227011 55227106 -16926776 + MER58A DNA MER1_type 1 97 -10 240 241 0 0 chr20 55227132 55227186 -16926696 + MER58A DNA MER1_type 168 221 -3 992 196 9 23 chr20 55228117 55228331 -16925551 - MER20 DNA MER1_type 0 219 9 1721 112 10 85 chr20 55228986 55229291 -16924591 - AluSx SINE Alu -16 296 15 1630 206 7 7 chr20 55229334 55229644 -16924238 - AluJb SINE Alu -2 310 1 1442 159 13 0 chr20 55229644 55229877 -16924005 + Tigger2 DNA MER2_type 2473 2708 -10 2060 128 3 0 chr20 55230224 55230512 -16923370 + AluSx SINE Alu 1 289 -23 872 151 0 22 chr20 55230651 55230790 -16923092 + AluJo SINE Alu 1 136 -176 1995 139 3 3 chr20 55230805 55231093 -16922789 + AluSq SINE Alu 1 288 -25 198 0 0 0 chr20 55231099 55231121 -16922761 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 1094 134 94 5 chr20 55231990 55232191 -16921691 - Tigger4(Zombi) DNA MER2_type -2 2729 2511 1939 162 3 13 chr20 55232196 55232499 -16921383 - AluJb SINE Alu -12 300 1 2031 106 33 7 chr20 55232760 55233035 -16920847 - AluSx SINE Alu -30 282 1 1352 205 143 17 chr20 55233222 55233598 -16920284 + LTR45B LTR ERV1 72 619 0 572 227 36 0 chr20 55234048 55234158 -16919724 + FLAM_A SINE Alu 1 114 -19 2312 94 0 0 chr20 55234832 55235120 -16918762 + AluSx SINE Alu 1 288 -24 270 281 56 11 chr20 55235738 55235827 -16918055 - L2 LINE L2 -5 3267 3175 23 54 0 0 chr20 55238735 55238772 -16915110 + AT_rich Low_complexity Low_complexity 1 37 0 6433 112 199 153 chr20 55239678 55239888 -16913994 + Tigger1 DNA MER2_type 1 200 -2218 1931 125 21 28 chr20 55239888 55240201 -16913681 - AluSx SINE Alu 0 311 1 6433 112 199 153 chr20 55240201 55240481 -16913401 + Tigger1 DNA MER2_type 200 466 -1952 1953 151 7 0 chr20 55240481 55240773 -16913109 + AluSx SINE Alu 1 294 -18 6433 112 199 153 chr20 55240773 55240895 -16912987 + Tigger1 DNA MER2_type 466 581 -1837 679 159 0 24 chr20 55240895 55241021 -16912861 - FRAM SINE Alu -12 164 42 6433 112 199 153 chr20 55241021 55241290 -16912592 + Tigger1 DNA MER2_type 581 836 -1582 1821 149 3 48 chr20 55241290 55241606 -16912276 + AluJb SINE Alu 1 302 -10 6433 112 199 153 chr20 55241606 55241750 -16912132 + Tigger1 DNA MER2_type 836 972 -1446 1816 134 0 0 chr20 55241750 55242011 -16911871 + AluSx SINE Alu 51 311 -1 2215 126 0 0 chr20 55242013 55242307 -16911575 + AluSx SINE Alu 1 294 -18 6433 112 199 153 chr20 55242307 55242347 -16911535 + Tigger1 DNA MER2_type 972 1009 -1409 279 0 0 0 chr20 55242347 55242378 -16911504 + (TG)n Simple_repeat Simple_repeat 2 32 0 6433 112 199 153 chr20 55242378 55242871 -16911011 + Tigger1 DNA MER2_type 1009 1478 -940 1810 137 70 0 chr20 55242871 55243141 -16910741 - AluJb SINE Alu -23 289 1 6433 112 199 153 chr20 55243141 55243286 -16910596 + Tigger1 DNA MER2_type 1478 1615 -803 2507 73 0 0 chr20 55243286 55243589 -16910293 - AluY SINE Alu -8 303 1 6433 112 199 153 chr20 55243589 55243619 -16910263 + Tigger1 DNA MER2_type 1615 1955 -463 2032 116 11 14 chr20 55243635 55243920 -16909962 - AluSx SINE Alu -28 284 1 24 32 0 0 chr20 55243920 55243951 -16909931 + AT_rich Low_complexity Low_complexity 1 31 0 1525 145 0 4 chr20 55243971 55244198 -16909684 - AluJb SINE Alu -30 282 57 329 73 0 0 chr20 55244198 55244239 -16909643 - FLAM_A SINE Alu -48 85 45 754 158 8 0 chr20 55244241 55244361 -16909521 + AluSg/x SINE Alu 176 296 -16 740 184 14 7 chr20 55244368 55244509 -16909373 + Tigger1 DNA MER2_type 2081 2222 -196 1041 171 0 18 chr20 55244509 55244679 -16909203 - AluSg/x SINE Alu -17 295 129 429 191 136 9 chr20 55244685 55244795 -16909087 - FLAM_C SINE Alu -9 124 1 878 130 49 12 chr20 55244796 55244958 -16908924 + Tigger1 DNA MER2_type 2217 2384 -34 1422 185 22 51 chr20 55245316 55245447 -16908435 + AluJo SINE Alu 3 136 -176 2294 106 0 3 chr20 55245447 55245749 -16908133 + AluSq SINE Alu 1 301 -12 1422 185 22 51 chr20 55245749 55245931 -16907951 + AluJo SINE Alu 136 307 -5 2311 93 0 0 chr20 55245974 55246254 -16907628 + AluSc SINE Alu 3 282 -27 459 0 0 0 chr20 55246254 55246305 -16907577 + (CATA)n Simple_repeat Simple_repeat 2 52 0 678 195 39 0 chr20 55246352 55246480 -16907402 - FLAM_A SINE Alu 0 133 1 1781 174 7 0 chr20 55246508 55246801 -16907081 + AluJb SINE Alu 1 295 -17 1469 102 205 8 chr20 55247095 55247339 -16906543 + AluSg1 SINE Alu 1 292 -17 191 225 0 0 chr20 55247526 55247566 -16906316 + MIR SINE MIR 51 90 -172 1708 185 0 23 chr20 55247582 55247885 -16905997 - AluJb SINE Alu -16 296 1 2132 117 3 0 chr20 55248037 55248328 -16905554 + AluSq SINE Alu 1 292 -21 292 255 121 7 chr20 55248432 55248581 -16905301 + L1P5 LINE L1 5265 5430 -721 280 260 120 20 chr20 55248821 55248921 -16904961 + L2 LINE L2 3196 3305 -8 235 303 83 18 chr20 55248921 55249139 -16904743 + L1ME4a LINE L1 5753 5984 -137 1527 145 52 8 chr20 55249149 55249397 -16904485 - AluJb SINE Alu -10 302 44 2248 121 0 6 chr20 55249399 55249713 -16904169 - AluSx SINE Alu 0 312 1 317 208 0 0 chr20 55249715 55249768 -16904114 - AluJb SINE Alu -246 53 1 845 194 29 6 chr20 55249836 55250011 -16903871 - L1MC1 LINE L1 -13 6320 6142 714 177 0 31 chr20 55250272 55250402 -16903480 + FLAM_C SINE Alu 1 126 -17 5168 138 73 16 chr20 55250781 55251694 -16902188 + L1MC1 LINE L1 5354 6318 -15 1665 151 0 89 chr20 55251704 55252041 -16901841 + AluJo SINE Alu 6 312 0 1707 171 16 26 chr20 55252043 55252352 -16901530 + AluJb SINE Alu 1 306 -6 718 92 92 8 chr20 55252352 55252483 -16901399 + L1PB2 LINE L1 6010 6151 0 1961 169 76 8 chr20 55252494 55252940 -16900942 + L1MC/D LINE L1 5198 5677 -743 1996 132 17 0 chr20 55252941 55253228 -16900654 + AluSx SINE Alu 1 292 -20 693 203 0 15 chr20 55253232 55253365 -16900517 + AluJo/FLAM SINE Alu 1 131 -171 1332 164 5 5 chr20 55253367 55253581 -16900301 + AluSx SINE Alu 1 214 -98 888 132 0 0 chr20 55253584 55253713 -16900169 - FLAM_C SINE Alu -8 135 7 6659 104 29 45 chr20 55253716 55254772 -16899110 + Tigger2 DNA MER2_type 1163 2201 -517 1734 164 69 17 chr20 55254785 55254937 -16898945 + MLT1B LTR MaLR 15 158 -232 2088 91 6 76 chr20 55254937 55255266 -16898616 + AluSp SINE Alu 1 306 -7 1734 164 69 17 chr20 55255266 55255460 -16898422 + MLT1B LTR MaLR 158 379 -11 777 251 52 26 chr20 55255783 55256014 -16897868 + MIR SINE MIR 14 250 -12 291 309 44 49 chr20 55256066 55256270 -16897612 + L1ME LINE L1 5531 5733 -388 1499 143 0 5 chr20 55256577 55256801 -16897081 + AluSg/x SINE Alu 82 304 -6 1994 143 27 0 chr20 55257083 55257376 -16896506 + AluSx SINE Alu 1 301 -11 2528 65 0 13 chr20 55257376 55257685 -16896197 + AluY SINE Alu 1 305 -6 197 331 105 23 chr20 55257871 55258004 -16895878 - MIR3 SINE MIR -62 146 3 5574 25 1 0 chr20 55258194 55258843 -16895039 - L1P LINE L1 -1240 4906 4257 7777 23 1 8 chr20 55258843 55259926 -16893956 + L1PA4 LINE L1 5078 6155 0 1920 158 0 16 chr20 55260083 55260387 -16893495 + AluJb SINE Alu 1 299 -13 1129 205 221 27 chr20 55261996 55262798 -16891084 - Charlie2 DNA MER1_type -12 2850 1862 2429 87 3 0 chr20 55262853 55263153 -16890729 - AluSp SINE Alu -10 303 3 21 0 0 0 chr20 55263164 55263185 -16890697 + AT_rich Low_complexity Low_complexity 1 21 0 1867 164 3 13 chr20 55263319 55263623 -16890259 + AluJb SINE Alu 7 307 -5 260 135 0 58 chr20 55263684 55263736 -16890146 + L1MC5 LINE L1 7321 7369 -592 1461 158 0 114 chr20 55263737 55264078 -16889804 - AluJo SINE Alu 0 302 1 771 138 8 8 chr20 55264151 55264274 -16889608 + AluJb SINE Alu 11 133 -179 2357 103 0 3 chr20 55264745 55265057 -16888825 - AluSq SINE Alu -2 311 1 1950 127 42 0 chr20 55265287 55265407 -16888475 + AluSx SINE Alu 1 114 -198 203 0 0 36 chr20 55265407 55265435 -16888447 + (TAAAA)n Simple_repeat Simple_repeat 2 28 0 1950 127 42 0 chr20 55265435 55265598 -16888284 + AluSx SINE Alu 114 296 -16 2319 70 0 21 chr20 55265600 55265927 -16887955 + AluY SINE Alu 1 321 0 1013 297 185 20 chr20 55266079 55266487 -16887395 - L2 LINE L2 -1 3312 2973 2214 116 3 0 chr20 55266487 55266790 -16887092 + AluSp SINE Alu 1 304 -9 1013 297 185 20 chr20 55266790 55267282 -16886600 - L2 LINE L2 -340 2973 2255 2051 138 0 0 chr20 55267303 55267585 -16886297 + AluJb SINE Alu 1 282 -30 2269 123 0 0 chr20 55267841 55268143 -16885739 + AluSx SINE Alu 1 302 -10 462 265 91 23 chr20 55268196 55268415 -16885467 + HAL1b LINE L1 397 630 -718 809 202 89 0 chr20 55268833 55269001 -16884881 + AluJb SINE Alu 127 309 -3 862 193 106 5 chr20 55269127 55269345 -16884537 + L1MD3 LINE L1 7751 7990 -5 431 240 80 27 chr20 55269358 55269508 -16884374 + L1MC5 LINE L1 6960 7117 -844 2157 123 7 0 chr20 55269508 55269818 -16884064 + AluSx SINE Alu 1 312 0 1015 221 249 35 chr20 55269925 55270319 -16883563 + MLT1F LTR MaLR 1 478 -64 1783 159 10 13 chr20 55270337 55270638 -16883244 - AluJb SINE Alu -12 300 1 518 213 0 0 chr20 55270669 55270763 -16883119 - FAM SINE Alu -67 118 25 287 203 62 0 chr20 55270763 55270827 -16883055 + MLT1F LTR MaLR 498 565 -2 953 221 109 52 chr20 55270829 55270978 -16882904 + L1MC5 LINE L1 7293 7432 -529 1682 164 3 58 chr20 55270978 55271308 -16882574 + AluJo SINE Alu 1 312 0 953 221 109 52 chr20 55271308 55271615 -16882267 + L1MC5 LINE L1 7432 7775 -186 934 146 0 127 chr20 55271632 55271852 -16882030 + AluJo SINE Alu 21 212 -100 825 78 63 0 chr20 55271855 55271997 -16881885 + G-rich Low_complexity Low_complexity 4 154 0 2117 112 7 3 chr20 55272728 55273022 -16880860 - AluSq SINE Alu -14 299 5 243 277 69 0 chr20 55273260 55273361 -16880521 + MIR SINE MIR 101 208 -54 261 296 0 28 chr20 55273385 55273493 -16880389 + MER104 DNA Tc2 29 133 -47 629 106 0 0 chr20 55273494 55273579 -16880303 + AluS SINE Alu 2 86 -227 307 217 0 0 chr20 55273579 55273639 -16880243 + HsTC2 DNA Tc2 1835 1894 -4 489 254 34 0 chr20 55273832 55273950 -16879932 - L2 LINE L2 -4 3309 3188 641 163 16 142 chr20 55273956 55274146 -16879736 - FRAM SINE Alu -10 166 1 2058 108 30 27 chr20 55274474 55274771 -16879111 + AluSg SINE Alu 1 298 -12 2177 122 3 0 chr20 55275140 55275435 -16878447 + AluSq SINE Alu 3 298 -15 2148 110 0 13 chr20 55275436 55275735 -16878147 + AluY SINE Alu 1 295 -16 2452 74 6 22 chr20 55276209 55276520 -16877362 + AluSg SINE Alu 1 306 -4 693 170 7 37 chr20 55276526 55276661 -16877221 + FLAM_C SINE Alu 1 131 -2 534 206 151 27 chr20 55276924 55277070 -16876812 + AluJo SINE Alu 2 165 -147 3436 172 38 57 chr20 55277084 55277512 -16876370 + LTR1 LTR ERV1 7 417 -368 2341 107 0 0 chr20 55277512 55277811 -16876071 + AluSc SINE Alu 1 299 -10 3436 172 38 57 chr20 55277811 55278121 -16875761 + LTR1 LTR ERV1 417 731 -54 705 154 8 62 chr20 55278121 55278251 -16875631 + AluJo SINE Alu 165 287 -25 21 36 0 0 chr20 55278270 55278298 -16875584 + AT_rich Low_complexity Low_complexity 1 28 0 1613 191 3 3 chr20 55278403 55278685 -16875197 - AluSx SINE Alu -30 282 1 22 35 0 0 chr20 55279025 55279054 -16874828 + AT_rich Low_complexity Low_complexity 1 29 0 806 194 60 119 chr20 55279136 55279363 -16874519 + L2 LINE L2 2428 2630 -684 1841 172 13 3 chr20 55279363 55279671 -16874211 - AluJo SINE Alu -1 311 1 806 194 60 119 chr20 55279671 55279778 -16874104 + L2 LINE L2 2630 2742 -572 421 186 131 55 chr20 55279820 55279965 -16873917 + L1ME4a LINE L1 5966 6121 0 1219 123 0 12 chr20 55280013 55280184 -16873698 - AluSg/x SINE Alu -10 302 134 2474 83 3 6 chr20 55280184 55280496 -16873386 - AluSx SINE Alu -1 311 1 811 242 146 27 chr20 55280546 55280806 -16873076 + AluJo SINE Alu 2 292 -10 472 273 76 83 chr20 55280865 55281175 -16872707 + L2 LINE L2 2772 3080 -233 261 0 0 0 chr20 55281178 55281207 -16872675 + (CA)n Simple_repeat Simple_repeat 2 30 0 229 289 36 24 chr20 55281246 55281329 -16872553 + L2 LINE L2 3229 3312 -1 252 0 0 0 chr20 55281950 55281978 -16871904 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 2028 114 0 18 chr20 55281982 55282262 -16871620 - AluSx SINE Alu -37 275 1 2219 116 0 7 chr20 55282553 55282856 -16871026 + AluSx SINE Alu 1 301 -11 1947 135 21 0 chr20 55283607 55283889 -16869993 + AluSx SINE Alu 1 288 -24 2082 107 52 0 chr20 55283900 55284189 -16869693 + AluSq SINE Alu 2 305 -8 24 0 0 0 chr20 55284189 55284213 -16869669 + AT_rich Low_complexity Low_complexity 1 24 0 2234 95 27 3 chr20 55284251 55284547 -16869335 + AluSp SINE Alu 1 303 -10 264 221 29 0 chr20 55285243 55285311 -16868571 + L1ME1 LINE L1 5208 5277 -869 1747 187 80 89 chr20 55285414 55286033 -16867849 + L1ME1 LINE L1 5318 5968 -198 928 241 88 42 chr20 55286058 55286375 -16867507 + L1M4 LINE L1 4063 4401 -1745 1791 102 42 121 chr20 55286375 55286509 -16867373 + AluSx SINE Alu 1 144 -168 9457 20 3 264 chr20 55286509 55288385 -16865497 + SVA Other Other 2 1386 0 1791 102 42 121 chr20 55288385 55288563 -16865319 + AluSx SINE Alu 144 288 -24 928 241 88 42 chr20 55288563 55288622 -16865260 + L1M4 LINE L1 4401 4456 -1690 1207 137 5 61 chr20 55288624 55288836 -16865046 + LTR9B LTR ERV1 445 644 0 468 165 41 52 chr20 55288836 55288933 -16864949 + HERV17 LTR ERV1 1 96 -7322 852 152 48 7 chr20 55288936 55289081 -16864801 + HERV17 LTR ERV1 409 559 -6859 1615 159 19 2 chr20 55289086 55289391 -16864491 + HERV17 LTR ERV1 746 1135 -7784 4645 138 20 19 chr20 55289393 55290083 -16863799 + HUERS-P3b LTR ERV1 6726 7416 -2 3173 114 41 33 chr20 55290085 55290116 -16863766 + LTR9B LTR ERV1 42 71 -573 2353 61 14 0 chr20 55290116 55290409 -16863473 - AluY SINE Alu -14 297 1 3173 114 41 33 chr20 55290409 55290893 -16862989 + LTR9B LTR ERV1 71 561 -83 2377 65 7 13 chr20 55290912 55291218 -16862664 + AluY SINE Alu 1 304 -7 1233 210 31 7 chr20 55291218 55291509 -16862373 + L1M4 LINE L1 4444 4741 -1405 2056 156 171 26 chr20 55291546 55292014 -16861868 + LTR10A LTR ERV1 13 548 -61 1149 233 77 104 chr20 55292021 55292786 -16861096 + LTR10A-int LTR ERV1 3 695 -5954 281 187 121 77 chr20 55292821 55292912 -16860970 + LTR10A-int LTR ERV1 975 1069 -5580 * 1642 118 53 40 chr20 55292907 55293228 -16860654 + HERV17 LTR ERV1 703 1027 -7599 769 186 0 14 chr20 55293238 55293256 -16860626 - FLAM_C SINE Alu -169 143 126 2089 110 10 7 chr20 55293256 55293546 -16860336 + AluSg SINE Alu 1 291 -19 769 186 0 14 chr20 55293546 55293672 -16860210 - FLAM_C SINE Alu -186 126 1 2095 131 10 0 chr20 55293874 55294165 -16859717 - AluSx SINE Alu -18 294 1 2321 102 0 0 chr20 55294165 55294459 -16859423 - AluSx SINE Alu -12 300 6 2331 92 3 19 chr20 55294593 55294910 -16858972 + AluSq SINE Alu 1 312 -1 1858 160 3 28 chr20 55294935 55295253 -16858629 - AluJo SINE Alu -2 310 1 2491 90 0 0 chr20 55295567 55295879 -16858003 + AluSx SINE Alu 1 312 0 1960 131 25 0 chr20 55296102 55296376 -16857506 - AluSx SINE Alu -30 282 2 1931 137 23 20 chr20 55296379 55296679 -16857203 - AluSx SINE Alu -11 301 1 2897 161 46 13 chr20 55296957 55297497 -16856385 - L1MC1 LINE L1 0 6333 5776 1433 148 35 4 chr20 55297538 55297768 -16856114 + AluSx SINE Alu 1 237 -75 180 311 66 0 chr20 55348015 55348076 -16805806 - L2 LINE L2 -1 3312 3248 1152 262 119 4 chr20 55348080 55348698 -16805184 + L2 LINE L2 2601 3312 -1 385 256 25 33 chr20 55348789 55348910 -16804972 + MLT1K LTR MaLR 138 257 -331 238 289 33 11 chr20 55349037 55349127 -16804755 + MLT1K LTR MaLR 497 588 0 418 319 60 12 chr20 55349145 55349311 -16804571 - MIR SINE MIR -9 253 80 2091 61 4 14 chr20 55349390 55349667 -16804215 + AluY SINE Alu 1 274 -37 209 57 29 0 chr20 55349672 55349707 -16804175 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 261 222 0 0 chr20 55349929 55349983 -16803899 - L2 LINE L2 -1 3312 3259 180 338 39 13 chr20 55350075 55350152 -16803730 - MIR SINE MIR -176 86 8 222 197 15 182 chr20 55350211 55350414 -16803468 - L2 LINE L2 -189 3083 2915 367 252 72 9 chr20 55350871 55350982 -16802900 - L2 LINE L2 -4 3309 3192 565 258 122 15 chr20 55351383 55351607 -16802275 + MIR SINE MIR 12 256 -6 1754 121 106 15 chr20 55351683 55351819 -16802063 + AluSx SINE Alu 1 123 -189 2045 114 17 0 chr20 55351819 55352109 -16801773 + AluY SINE Alu 1 295 -16 1754 121 106 15 chr20 55352109 55352245 -16801637 + AluSx SINE Alu 123 298 -14 259 313 46 46 chr20 55352247 55352378 -16801504 + MLT1K LTR MaLR 73 203 -385 2010 93 3 80 chr20 55353203 55353368 -16800514 - AluSx SINE Alu -13 299 170 2143 86 3 7 chr20 55353368 55353660 -16800222 - AluY SINE Alu -20 291 1 2010 93 3 80 chr20 55353660 55353818 -16800064 - AluSx SINE Alu -142 170 1 813 268 173 18 chr20 55353945 55354333 -16799549 - L2 LINE L2 -11 3302 2855 278 274 18 89 chr20 55354334 55354374 -16799508 - L2 LINE L2 -567 2747 2706 1993 156 0 0 chr20 55354374 55354681 -16799201 - AluJo SINE Alu -5 307 1 278 274 18 89 chr20 55354681 55354808 -16799074 - L2 LINE L2 -608 2706 2592 829 247 191 50 chr20 55354871 55355353 -16798529 - MLT1G1 LTR MaLR 0 595 46 1028 188 79 5 chr20 55356535 55356737 -16797145 - MER20 DNA MER1_type -2 217 1 507 300 185 25 chr20 55357463 55357826 -16796056 - L2 LINE L2 -16 3297 2877 847 244 149 45 chr20 55359404 55359833 -16794049 + MLT1H LTR MaLR 20 533 -16 192 97 0 0 chr20 55359957 55359988 -16793894 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 363 237 0 0 chr20 55360069 55360145 -16793737 + MIR SINE MIR 115 190 -72 393 155 42 0 chr20 55360279 55360350 -16793532 - Charlie8 DNA MER1_type -9 2408 2335 369 269 146 23 chr20 55360500 55360630 -16793252 - Charlie8 DNA MER1_type -2246 171 26 611 246 39 30 chr20 55361287 55361490 -16792392 - L2 LINE L2 -1 3312 3108 906 261 98 22 chr20 55361557 55361925 -16791957 + MLT1L LTR MaLR 176 571 -44 1762 161 45 18 chr20 55362187 55362473 -16791409 + AluJb SINE Alu 1 294 -18 482 271 87 39 chr20 55363190 55363419 -16790463 + L2 LINE L2 2167 2406 -908 886 196 39 6 chr20 55363483 55363662 -16790220 - MER20 DNA MER1_type -31 188 4 802 249 79 43 chr20 55363665 55363923 -16789959 + L2 LINE L2 2473 2720 -593 2354 116 0 0 chr20 55363923 55364225 -16789657 - AluSx SINE Alu -8 304 3 802 249 79 43 chr20 55364225 55364336 -16789546 + L2 LINE L2 2720 2826 -487 2234 133 0 0 chr20 55364336 55364637 -16789245 - AluSx SINE Alu -11 301 1 802 249 79 43 chr20 55364637 55364865 -16789017 + L2 LINE L2 2826 3094 -219 2217 118 0 10 chr20 55364870 55365174 -16788708 - AluSx SINE Alu -11 301 1 245 291 12 35 chr20 55365714 55365800 -16788082 + MLT1L LTR MaLR 114 197 -418 642 283 98 0 chr20 55365943 55366148 -16787734 - MIR SINE MIR -2 260 36 384 270 25 95 chr20 55366215 55366415 -16787467 + MLT1K LTR MaLR 398 583 -5 663 222 103 39 chr20 55367279 55367513 -16786369 + MIR SINE MIR 13 261 -1 250 328 48 8 chr20 55368891 55369016 -16784866 + L2 LINE L2 3142 3271 -1 26 74 0 0 chr20 55369733 55369787 -16784095 + GC_rich Low_complexity Low_complexity 1 54 0 24 85 0 0 chr20 55369839 55369898 -16783984 + GC_rich Low_complexity Low_complexity 1 59 0 450 243 119 17 chr20 55370828 55371005 -16782877 - MIR SINE MIR -50 212 18 1080 127 51 69 chr20 55371417 55371477 -16782405 - MER33 DNA MER1_type -2292 293 233 1955 135 7 7 chr20 55371477 55371765 -16782117 + AluJb SINE Alu 1 288 -24 1080 127 51 69 chr20 55371765 55371980 -16781902 - MER33 DNA MER1_type -2352 233 23 227 319 43 43 chr20 55372020 55372114 -16781768 - MIR3 SINE MIR -44 164 71 216 265 0 0 chr20 55372631 55372680 -16781202 + (TG)n Simple_repeat Simple_repeat 2 50 0 374 273 96 53 chr20 55374675 55374862 -16779020 + MIR SINE MIR 55 249 -13 586 270 135 8 chr20 55375074 55375326 -16778556 - L1MC4 LINE L1 0 8042 7759 833 275 87 54 chr20 55375333 55375780 -16778102 + L2 LINE L2 2852 3313 0 391 250 128 55 chr20 55375870 55376034 -16777848 + MIR SINE MIR 57 232 -30 1952 156 7 3 chr20 55376487 55376782 -16777100 - AluJo SINE Alu -15 297 2 1867 111 4 34 chr20 55376892 55377154 -16776728 + AluSx SINE Alu 1 254 -58 1148 215 139 54 chr20 55377309 55377482 -16776400 + MLT1C LTR MaLR 6 163 -304 2205 129 10 0 chr20 55377482 55377785 -16776097 + AluSx SINE Alu 1 306 -6 1148 215 139 54 chr20 55377785 55378035 -16775847 + MLT1C LTR MaLR 163 465 -2 23 0 0 0 chr20 55378051 55378074 -16775808 + GC_rich Low_complexity Low_complexity 1 23 0 204 288 30 0 chr20 55378157 55378223 -16775659 - MER5B DNA MER1_type -61 117 50 627 184 35 0 chr20 55378224 55378365 -16775517 - L1MB7 LINE L1 0 6184 6039 227 250 17 0 chr20 55378378 55378438 -16775444 + MER5B DNA MER1_type 113 173 -5 2349 93 10 0 chr20 55378945 55379246 -16774636 - AluSx SINE Alu -8 304 1 2407 79 20 3 chr20 55380334 55380639 -16773243 - AluSg SINE Alu 0 310 1 861 151 0 0 chr20 55380992 55381138 -16772744 + MER5A DNA MER1_type 1 146 -43 1872 149 6 19 chr20 55381618 55381940 -16771942 + L1M3 LINE L1 5444 5761 -422 22 35 0 0 chr20 55382025 55382054 -16771828 + AT_rich Low_complexity Low_complexity 1 29 0 1894 137 16 44 chr20 55382061 55382382 -16771500 + AluJb SINE Alu 1 312 0 552 321 87 11 chr20 55382469 55382756 -16771126 + L2 LINE L2 2258 2566 -748 1343 275 83 11 chr20 55383086 55383541 -16770341 - LTR16C LTR ERVL 0 491 4 608 232 176 24 chr20 55383624 55383874 -16770008 - MER113 DNA MER1_type? -140 381 94 474 245 3 0 chr20 55385028 55385426 -16768456 + (TG)n Simple_repeat Simple_repeat 1 399 0 192 161 0 0 chr20 55385645 55385676 -16768206 - MIR SINE MIR -37 225 195 192 269 19 0 chr20 55385685 55385737 -16768145 - L2 LINE L2 -5 3267 3215 321 240 165 8 chr20 55385987 55386108 -16767774 - MIR SINE MIR -110 152 13 222 250 0 0 chr20 55386145 55386197 -16767685 + MIR SINE MIR 94 145 -117 946 285 120 21 chr20 55386807 55387615 -16766267 - L2 LINE L2 -26 3287 2412 1744 105 0 9 chr20 55387956 55388184 -16765698 + AluSx SINE Alu 1 226 -86 3670 106 85 7 chr20 55388184 55388781 -16765101 + LTR9B LTR ERV1 1 644 0 456 157 0 0 chr20 55388781 55388864 -16765018 + AluSx SINE Alu 220 302 -7 1707 101 109 16 chr20 55388875 55389177 -16764705 + AluSx SINE Alu 1 326 0 430 252 101 0 chr20 55389789 55389928 -16763954 - MLT1L LTR MaLR 0 615 463 1809 180 134 116 chr20 55390109 55390858 -16763024 - LTR1B LTR ERV1 -75 751 1 340 269 41 78 chr20 55390914 55391133 -16762749 - MLT1L LTR MaLR -388 227 17 1621 180 4 15 chr20 55391617 55391889 -16761993 + AluJo SINE Alu 1 269 -43 1945 118 7 18 chr20 55391889 55392166 -16761716 + AluSx SINE Alu 21 296 -16 231 213 21 0 chr20 55392179 55392226 -16761656 + Charlie5 DNA MER1_type 19 66 -2546 731 167 0 8 chr20 55392227 55392347 -16761535 + AluJo/FLAM SINE Alu 1 119 -183 2115 85 3 41 chr20 55392348 55392672 -16761210 - AluSp SINE Alu 0 313 1 365 130 0 26 chr20 55392702 55392779 -16761103 + Charlie5 DNA MER1_type 53 127 -2485 * 1418 192 73 14 chr20 55392776 55393145 -16760737 + Charlie5 DNA MER1_type 2234 2624 0 242 299 84 28 chr20 55394783 55394890 -16758992 + MIR SINE MIR 129 241 -21 521 319 123 19 chr20 55395798 55396108 -16757774 - L2 LINE L2 -4 3309 2968 4916 187 47 14 chr20 55396110 55397524 -16756358 + L1MB3 LINE L1 4103 5571 -612 3476 147 22 0 chr20 55397632 55398253 -16755629 + L1MB3 LINE L1 5549 6183 0 441 278 29 17 chr20 55398260 55398433 -16755449 - L2 LINE L2 -341 2973 2799 234 228 0 63 chr20 55398448 55398527 -16755355 - MIR SINE MIR -121 141 68 1149 250 17 41 chr20 55398527 55398871 -16755011 + MLT1J LTR MaLR 2 337 -174 220 336 44 15 chr20 55399139 55399276 -16754606 - L2 LINE L2 -555 2759 2619 866 243 13 47 chr20 55399651 55399886 -16753996 - MIR SINE MIR -1 261 35 197 243 178 9 chr20 55400232 55400339 -16753543 + L2 LINE L2 3184 3308 -5 396 191 119 0 chr20 55400340 55400424 -16753458 + L2 LINE L2 3207 3300 -13 228 67 0 0 chr20 55400425 55400455 -16753427 + (TGAA)n Simple_repeat Simple_repeat 2 31 0 235 293 0 17 chr20 55401367 55401425 -16752457 + MLT1J LTR MaLR 86 142 -369 207 231 11 0 chr20 55401547 55401605 -16752277 + MIR SINE MIR 116 173 -89 297 235 38 76 chr20 55401607 55401739 -16752143 - MLT1K LTR MaLR 0 588 462 530 267 126 15 chr20 55402231 55402493 -16751389 + MER113 DNA MER1_type? 110 400 -121 2088 127 0 36 chr20 55402684 55402991 -16750891 + AluSx SINE Alu 3 298 -14 1847 167 10 13 chr20 55404190 55404501 -16749381 + AluSx SINE Alu 1 310 -2 397 253 30 0 chr20 55404509 55404608 -16749274 + L1ME2 LINE L1 6034 6135 -29 502 350 54 30 chr20 55404621 55404919 -16748963 + L1M4 LINE L1 2875 3181 -2965 2102 142 7 0 chr20 55405150 55405452 -16748430 - AluSx SINE Alu -8 304 1 642 181 128 0 chr20 55405947 55406096 -16747786 + AluSg/x SINE Alu 137 304 -8 841 150 0 0 chr20 55406173 55406306 -16747576 + FLAM_C SINE Alu 1 133 0 247 143 18 18 chr20 55406307 55406363 -16747519 + GA-rich Low_complexity Low_complexity 2 57 0 305 242 16 57 chr20 55406365 55406489 -16747393 - L1ME3A LINE L1 -34 6136 6018 2459 142 35 28 chr20 55406663 55407094 -16746788 + Tigger2a DNA MER2_type 1 434 0 1808 163 3 0 chr20 55407938 55408221 -16745661 + AluJo SINE Alu 19 302 -10 1990 133 0 4 chr20 55408232 55408506 -16745376 + AluSx SINE Alu 13 286 -22 396 82 0 0 chr20 55408506 55408567 -16745315 + (CA)n Simple_repeat Simple_repeat 2 62 0 613 144 0 0 chr20 55408956 55409046 -16744836 - AluSg/x SINE Alu -18 294 205 365 274 34 8 chr20 55409601 55409718 -16744164 + MIR SINE MIR 44 163 -99 251 100 0 0 chr20 55409784 55409824 -16744058 - MIR SINE MIR -112 150 111 304 212 91 30 chr20 55410707 55410806 -16743076 - Charlie8 DNA MER1_type -2235 182 78 273 140 20 0 chr20 55410984 55411034 -16742848 - U7 snRNA snRNA -12 51 1 455 308 51 45 chr20 55411104 55411396 -16742486 + L2 LINE L2 3011 3304 -9 1800 143 79 4 chr20 55412599 55412879 -16741003 + AluSx SINE Alu 1 301 -11 471 233 107 111 chr20 55413022 55413078 -16740804 - MLT1J LTR MaLR -48 463 408 2094 135 13 3 chr20 55413078 55413382 -16740500 + AluSx SINE Alu 1 307 -5 471 233 107 111 chr20 55413382 55413566 -16740316 - MLT1J LTR MaLR -103 408 225 2513 117 42 2 chr20 55413566 55413976 -16739906 - MSTB LTR MaLR 0 426 1 471 233 107 111 chr20 55413976 55414124 -16739758 - MLT1J LTR MaLR -286 225 36 370 233 180 12 chr20 55414151 55414323 -16739559 - L1ME LINE L1 -370 5751 5551 211 329 0 0 chr20 55414742 55414821 -16739061 - L2 LINE L2 -313 3000 2922 503 258 0 0 chr20 55414822 55414919 -16738963 - MER81 DNA DNA -7 107 11 316 330 11 0 chr20 55414914 55415008 -16738874 - MER81 DNA DNA -19 95 1 * 459 286 102 9 chr20 55415090 55415440 -16738442 + MLT1J LTR MaLR 75 481 -30 227 169 62 31 chr20 55417174 55417239 -16736643 + MLT2D LTR ERVL 220 286 -128 237 226 0 65 chr20 55417283 55417345 -16736537 + MLT2D LTR ERVL 229 286 -128 229 218 36 18 chr20 55418519 55418574 -16735308 + MLT2D LTR ERVL 231 286 -128 328 308 92 17 chr20 55422369 55422609 -16731273 + L2 LINE L2 2719 2976 -338 283 289 61 51 chr20 55422605 55422802 -16731080 + L2 LINE L2 2836 3034 -238 * 275 109 22 0 chr20 55422936 55422982 -16730900 + MADE1 DNA Mariner 1 47 -33 315 137 0 0 chr20 55423012 55423063 -16730819 + MADE1 DNA Mariner 30 80 0 256 258 220 30 chr20 55423067 55423199 -16730683 + L2 LINE L2 3155 3311 -2 1363 200 0 16 chr20 55423966 55424244 -16729638 - AluJb SINE Alu 0 312 51 710 211 0 0 chr20 55424255 55424388 -16729494 - FLAM_C SINE Alu 0 133 1 542 299 10 34 chr20 55424389 55424596 -16729286 + L2 LINE L2 3111 3312 -1 2299 110 7 0 chr20 55424882 55425182 -16728700 - AluSx SINE Alu -10 302 1 527 114 6 186 chr20 55425289 55425456 -16728426 - MER96B DNA MER1_type? 0 417 281 458 163 114 66 chr20 55425343 55425509 -16728373 + MER96B DNA MER1_type? 14 187 -230 * 1767 107 121 4 chr20 55425825 55426097 -16727785 + AluSx SINE Alu 1 304 -8 436 337 119 0 chr20 55429151 55429353 -16724529 + MIR SINE MIR 8 233 -29 307 213 0 0 chr20 55429991 55430052 -16723830 - MLT1I LTR MaLR -275 134 74 2158 99 28 0 chr20 55430651 55430935 -16722947 + AluSx SINE Alu 1 292 -20 466 243 45 9 chr20 55431566 55431677 -16722205 + MIR SINE MIR 28 142 -120 214 148 229 0 chr20 55432148 55432209 -16721673 - MIR SINE MIR -12 250 176 792 227 92 0 chr20 55432521 55432728 -16721154 - MIR SINE MIR -12 250 25 629 259 70 53 chr20 55433265 55433624 -16720258 + MLT1K LTR MaLR 124 488 -100 1080 219 72 4 chr20 55433625 55433876 -16720006 - MLT1E2 LTR MaLR 0 626 359 2458 167 20 2 chr20 55433876 55434320 -16719562 - L1MA4 LINE L1 -165 6135 5684 225 0 0 0 chr20 55434321 55434346 -16719536 + (CAAAA)n Simple_repeat Simple_repeat 3 27 0 876 237 170 28 chr20 55434350 55434738 -16719144 - MLT1E1 LTR MaLR -242 400 1 285 172 65 65 chr20 55434738 55434830 -16719052 + MLT1K LTR MaLR 484 575 -13 2054 170 0 0 chr20 55434831 55435143 -16718739 + AluSx SINE Alu 1 312 0 1626 176 60 6 chr20 55435151 55435515 -16718367 + L1MB7 LINE L1 5784 6167 -17 2582 80 0 0 chr20 55435973 55436284 -16717598 + AluY SINE Alu 1 311 0 913 261 129 28 chr20 55436444 55436915 -16716967 - LTR53 LTR ERVL 0 519 1 2251 105 0 3 chr20 55437065 55437381 -16716501 + AluSx SINE Alu 1 315 0 319 336 34 0 chr20 55437860 55438006 -16715876 - L2 LINE L2 -3135 179 29 709 286 118 22 chr20 55438260 55438623 -16715259 - MLT1L LTR MaLR -176 439 42 208 234 43 0 chr20 55438992 55439039 -16714843 - MIR SINE MIR -67 141 93 377 290 62 44 chr20 55441244 55441502 -16712380 + L2 LINE L2 2798 3050 -263 506 304 118 9 chr20 55441722 55441942 -16711940 - MIR SINE MIR -5 257 14 222 118 0 0 chr20 55441961 55441995 -16711887 + (A)n Simple_repeat Simple_repeat 1 34 0 2321 86 0 0 chr20 55442101 55442410 -16711472 - AluSc SINE Alu 0 309 1 602 176 98 69 chr20 55442829 55443033 -16710849 - MER63A DNA MER1_type 0 210 1 393 105 0 0 chr20 55443222 55443279 -16710603 - 5S rRNA rRNA -21 100 44 207 333 15 0 chr20 55443336 55443402 -16710480 - L2 LINE L2 0 3313 3247 291 241 23 23 chr20 55444173 55444260 -16709622 + L2 LINE L2 3184 3270 -2 2067 136 36 0 chr20 55445108 55445409 -16708473 - AluJo SINE Alu 0 312 1 307 284 0 11 chr20 55445662 55445750 -16708132 + CT-rich Low_complexity Low_complexity 2 88 0 1632 76 0 9 chr20 55445998 55446209 -16707673 + AluSx SINE Alu 1 209 -103 2111 85 0 0 chr20 55446209 55446467 -16707415 + AluY SINE Alu 41 298 -13 1428 104 59 18 chr20 55446538 55446759 -16707123 - MER30 DNA MER1_type 0 230 1 777 292 126 7 chr20 55446910 55447338 -16706544 + L1MC4 LINE L1 6888 7366 -676 365 287 57 0 chr20 55448162 55448284 -16705598 - L2 LINE L2 -2 3311 3183 246 318 80 17 chr20 55448442 55448681 -16705201 + LTR16C LTR ERVL 181 434 -57 506 165 31 0 chr20 55449301 55449398 -16704484 + LTR49-int LTR ERV1 3348 3447 -2884 277 257 104 35 chr20 55450185 55450329 -16703553 - LTR16A1 LTR ERVL 0 457 304 668 330 63 54 chr20 55451633 55452060 -16701822 + L1MC4a LINE L1 4876 5306 -840 228 125 36 18 chr20 55452137 55452193 -16701689 + GA-rich Low_complexity Low_complexity 4 60 0 706 320 79 46 chr20 55452196 55452717 -16701165 + L1MC4a LINE L1 5383 5920 -1888 1595 202 123 35 chr20 55453273 55453839 -16700043 + MLT1E1 LTR MaLR 1 624 0 424 334 40 56 chr20 55453839 55453968 -16699914 - L2 LINE L2 -30 3283 3153 1478 204 7 42 chr20 55453968 55454276 -16699606 + AluJo SINE Alu 1 297 -15 424 334 40 56 chr20 55454276 55454520 -16699362 - L2 LINE L2 -160 3153 2916 1854 152 3 3 chr20 55454860 55455143 -16698739 - AluJb SINE Alu -29 283 1 238 270 14 0 chr20 55455150 55455224 -16698658 - MER113 DNA MER1_type? -304 217 143 1011 240 77 17 chr20 55455228 55455515 -16698367 - L1ME1 LINE L1 -5 6161 5858 1839 213 103 22 chr20 55456760 55457305 -16696577 - L1ME1 LINE L1 -292 5872 5284 956 235 153 17 chr20 55457327 55457785 -16696097 + MLT1E3 LTR MaLR 109 624 0 1353 184 37 113 chr20 55459341 55459442 -16694440 + MLT1B LTR MaLR 6 113 -277 2091 113 7 13 chr20 55459442 55459752 -16694130 + AluSx SINE Alu 1 308 -4 1353 184 37 113 chr20 55459752 55460058 -16693824 + MLT1B LTR MaLR 113 382 -8 262 219 269 44 chr20 55460070 55460230 -16693652 + Charlie8 DNA MER1_type 39 234 -2183 233 354 39 6 chr20 55460301 55460482 -16693400 - LTR67 LTR ERVL 0 557 371 1361 206 49 62 chr20 55460615 55460669 -16693213 + LTR55 LTR ERV 1 54 -494 2070 108 3 0 chr20 55460669 55461131 -16692751 - AluSx SINE Alu 0 463 1 1361 206 49 62 chr20 55461131 55461579 -16692303 + LTR55 LTR ERV 54 538 -10 431 264 19 0 chr20 55461922 55462028 -16691854 - MER81 DNA DNA -3 111 4 873 114 38 30 chr20 55462234 55462366 -16691516 - FLAM_C SINE Alu 0 133 1 2695 107 23 6 chr20 55462920 55463388 -16690494 + MER1A DNA MER1_type 1 529 0 197 244 87 47 chr20 55463448 55463575 -16690307 + L2 LINE L2 2928 3059 -213 1106 278 96 17 chr20 55464083 55464662 -16689220 + L2 LINE L2 2449 3095 -218 438 255 195 39 chr20 55464686 55465070 -16688812 + LTR33 LTR ERVL 37 480 -41 308 263 0 80 chr20 55465078 55465215 -16688667 - MER104 DNA Tc2 -49 131 6 321 333 34 20 chr20 55465217 55465364 -16688518 + L2 LINE L2 3154 3302 -11 1719 101 8 0 chr20 55465381 55465628 -16688254 - AluSx SINE Alu 0 312 64 371 127 12 43 chr20 55465749 55465835 -16688047 - Alu SINE Alu -247 53 1 352 313 75 19 chr20 55465860 55466020 -16687862 + MLT1F LTR MaLR 9 177 -365 186 43 0 0 chr20 55466024 55466047 -16687835 + (TC)n Simple_repeat Simple_repeat 1 23 0 1024 208 129 29 chr20 55466047 55466326 -16687556 + MLT1F LTR MaLR 236 542 0 1728 122 4 0 chr20 55466655 55466918 -16686964 + L1PA16 LINE L1 5777 6040 -126 1001 93 0 0 chr20 55466919 55467048 -16686834 + AluSp SINE Alu 1 129 -184 777 257 15 50 chr20 55467175 55467436 -16686446 - MER112 DNA MER1_type -4 252 1 352 311 4 0 chr20 55467965 55468239 -16685643 + (CA)n Simple_repeat Simple_repeat 1 275 0 186 43 0 0 chr20 55468514 55468537 -16685345 + (TG)n Simple_repeat Simple_repeat 1 23 0 1165 184 52 0 chr20 55471344 55471556 -16682326 - MIR SINE MIR -27 235 13 239 269 90 30 chr20 55471688 55471822 -16682060 + L2 LINE L2 2924 3065 -248 * 583 273 91 17 chr20 55471798 55471974 -16681908 - L2 LINE L2 -17 3296 3108 739 245 38 5 chr20 55472008 55472192 -16681690 - MLT1D LTR MaLR 0 505 316 585 160 22 46 chr20 55472203 55472550 -16681332 + CT-rich Low_complexity Low_complexity 1 338 0 1892 126 0 11 chr20 55472583 55472861 -16681021 - AluSx SINE Alu -7 305 31 1099 217 88 0 chr20 55472883 55473155 -16680727 - MLT1D LTR MaLR -202 303 8 998 293 56 7 chr20 55473162 55473654 -16680228 - L2 LINE L2 -232 3081 2572 569 321 38 19 chr20 55473654 55473919 -16679963 + LTR16A LTR ERVL 16 285 -165 834 296 108 22 chr20 55474264 55474710 -16679172 - L2 LINE L2 -1 3312 2829 1363 187 29 38 chr20 55474739 55475054 -16678828 + AluJb SINE Alu 1 312 0 1666 111 118 4 chr20 55477595 55477874 -16676008 - AluSx SINE Alu -1 311 1 492 168 0 200 chr20 55478194 55478414 -16675468 + MER96B DNA MER1_type? 242 417 0 2166 110 7 0 chr20 55478521 55478821 -16675061 + AluSx SINE Alu 1 302 -10 584 302 8 33 chr20 55479107 55479315 -16674567 - L2 LINE L2 -1 3312 3109 1752 180 0 13 chr20 55479315 55479631 -16674251 + AluJb SINE Alu 1 312 0 584 302 8 33 chr20 55479631 55479664 -16674218 - L2 LINE L2 -204 3109 3077 263 304 29 39 chr20 55480435 55480537 -16673345 - L2 LINE L2 -58 3255 3155 318 137 0 0 chr20 55480541 55480592 -16673290 - MADE1 DNA Mariner 0 80 30 258 130 22 0 chr20 55480622 55480668 -16673214 - MADE1 DNA Mariner -33 47 1 295 305 51 41 chr20 55480802 55480999 -16672883 - L2 LINE L2 -238 3034 2836 * 367 308 92 17 chr20 55480995 55481235 -16672647 - L2 LINE L2 -338 2976 2719 234 218 36 18 chr20 55537584 55537639 -16616243 - MLT2D LTR ERVL -128 286 231 261 227 0 61 chr20 55538813 55538879 -16615003 - MLT2D LTR ERVL -128 286 225 283 208 0 70 chr20 55539480 55539581 -16614301 - MLT2D LTR ERVL -128 286 229 238 169 62 31 chr20 55539590 55539655 -16614227 - MLT2D LTR ERVL -128 286 220 479 283 102 9 chr20 55541389 55541739 -16612143 - MLT1J LTR MaLR -30 481 75 326 330 11 0 chr20 55541821 55541915 -16611967 + MER81 DNA DNA 1 95 -19 * 505 258 0 0 chr20 55541910 55542007 -16611875 + MER81 DNA DNA 11 107 -7 220 329 0 0 chr20 55542008 55542087 -16611795 + L2 LINE L2 2922 3000 -313 342 250 174 6 chr20 55542506 55542678 -16611204 + L1ME LINE L1 5551 5751 -370 494 238 107 111 chr20 55542705 55542853 -16611029 + MLT1J LTR MaLR 36 183 -328 2703 117 42 2 chr20 55542853 55543263 -16610619 + MSTB LTR MaLR 1 426 0 494 238 107 111 chr20 55543263 55543447 -16610435 + MLT1J LTR MaLR 183 408 -103 1982 135 13 3 chr20 55543447 55543751 -16610131 - AluSx SINE Alu -5 307 1 494 238 107 111 chr20 55543751 55543807 -16610075 + MLT1J LTR MaLR 408 463 -48 1710 141 78 3 chr20 55543948 55544232 -16609650 - AluSx SINE Alu -7 305 1 514 308 51 45 chr20 55545433 55545725 -16608157 - L2 LINE L2 -9 3304 3011 309 100 20 0 chr20 55545795 55545845 -16608037 + U7 snRNA snRNA 1 51 -12 305 211 100 0 chr20 55546036 55546126 -16607756 + Charlie8 DNA MER1_type 84 182 -2235 252 100 0 0 chr20 55546905 55546945 -16606937 + MIR SINE MIR 111 150 -112 400 241 36 9 chr20 55547011 55547123 -16606759 - MIR SINE MIR -99 163 49 679 260 23 47 chr20 55547828 55548086 -16605796 - MER112 DNA MER1_type -4 252 1 290 286 4 0 chr20 55548614 55548870 -16605012 + (CA)n Simple_repeat Simple_repeat 1 257 0 402 21 0 0 chr20 55549141 55549188 -16604694 + (TG)n Simple_repeat Simple_repeat 1 47 0 1125 198 52 0 chr20 55552008 55552220 -16601662 - MIR SINE MIR -27 235 13 258 261 90 30 chr20 55552352 55552486 -16601396 + L2 LINE L2 2924 3065 -248 * 528 267 81 52 chr20 55552462 55552672 -16601210 - L2 LINE L2 -17 3296 3081 770 235 37 5 chr20 55552672 55552859 -16601023 - MLT1D LTR MaLR 0 505 313 838 102 13 19 chr20 55552869 55553026 -16600856 + (TTTC)n Simple_repeat Simple_repeat 1 156 0 1946 149 0 9 chr20 55553042 55553357 -16600525 - AluSx SINE Alu 0 312 1 1187 220 89 3 chr20 55553357 55553654 -16600228 - MLT1D LTR MaLR -179 326 1 1097 276 56 7 chr20 55553654 55554146 -16599736 - L2 LINE L2 -232 3081 2572 560 322 42 19 chr20 55554146 55554410 -16599472 + LTR16A LTR ERVL 16 285 -165 848 298 52 24 chr20 55554756 55555138 -16598744 - L2 LINE L2 -1 3312 2920 2364 85 0 0 chr20 55555235 55555542 -16598340 + AluY SINE Alu 1 307 -4 1487 174 78 17 chr20 55555546 55555663 -16598219 + AluJb SINE Alu 1 109 -203 549 0 0 0 chr20 55555663 55555724 -16598158 + (CA)n Simple_repeat Simple_repeat 2 62 0 1487 174 78 17 chr20 55555724 55555900 -16597982 + AluJb SINE Alu 109 312 0 554 319 119 53 chr20 55556699 55557143 -16596739 + MLT1K LTR MaLR 2 486 -102 1111 179 22 54 chr20 55557143 55557367 -16596515 - MER20 DNA MER1_type 0 219 3 554 319 119 53 chr20 55557367 55557433 -16596449 + MLT1K LTR MaLR 486 546 -42 201 32 32 0 chr20 55557662 55557693 -16596189 - L2 LINE L2 -219 3053 3022 1314 241 74 35 chr20 55557951 55558437 -16595445 + MLT1D LTR MaLR 1 505 0 2494 158 60 5 chr20 55558972 55559409 -16594473 + LOR1b LTR ERV1 1 461 0 292 273 31 23 chr20 55559473 55559601 -16594281 - LTR67 LTR ERVL -1 556 428 1575 245 167 10 chr20 55559870 55559990 -16593892 - REP3 LTR ERV 0 562 462 2162 174 69 20 chr20 55559990 55560398 -16593484 + MSTA LTR MaLR 1 428 0 1575 245 167 10 chr20 55560398 55560763 -16593119 - REP3 LTR ERV -100 462 1 1937 138 46 35 chr20 55561451 55561822 -16592060 - THE1C LTR MaLR 0 375 1 511 269 23 12 chr20 55561935 55562106 -16591776 - MER96B DNA MER1_type? -7 410 238 2223 81 0 14 chr20 55562209 55562523 -16591359 + AluSg1 SINE Alu 8 309 0 383 232 200 22 chr20 55564265 55564450 -16589432 - MLT1K LTR MaLR -8 580 363 420 20 0 0 chr20 55564710 55564759 -16589123 + (TG)n Simple_repeat Simple_repeat 1 49 0 407 302 26 0 chr20 55565456 55565572 -16588310 + L2 LINE L2 3190 3308 -5 570 322 19 12 chr20 55565584 55565842 -16588040 + MIR SINE MIR 2 261 -1 472 226 0 0 chr20 55565882 55565975 -16587907 + L2 LINE L2 3221 3313 0 1107 287 92 18 chr20 55566708 55567165 -16586717 + LTR16C LTR ERVL 1 491 0 381 268 58 68 chr20 55567186 55567376 -16586506 - MLT1K LTR MaLR -26 562 375 1594 265 90 75 chr20 55567508 55568309 -16585573 - L1ME LINE L1 -5253 817 5 443 320 86 0 chr20 55568313 55568441 -16585441 - MLT1K LTR MaLR -327 261 123 270 239 66 102 chr20 55569131 55569298 -16584584 - MLT1J LTR MaLR -76 435 275 864 224 97 62 chr20 55569465 55569877 -16584005 + MER57A LTR ERV1 20 401 -2 732 273 45 18 chr20 55570010 55570230 -16583652 - MIR SINE MIR -32 230 5 23 33 0 0 chr20 55570312 55570342 -16583540 + AT_rich Low_complexity Low_complexity 1 30 0 1002 188 62 67 chr20 55570348 55570720 -16583162 - L1MC5 LINE L1 -54 7907 7538 387 0 0 0 chr20 55570760 55570803 -16583079 + (TG)n Simple_repeat Simple_repeat 2 44 0 504 239 128 68 chr20 55571812 55572046 -16581836 + MIR SINE MIR 15 262 0 772 301 39 0 chr20 55572059 55572288 -16581594 + MIR SINE MIR 14 251 -11 503 225 92 0 chr20 55572538 55572658 -16581224 - MLT1H1 LTR MaLR 0 555 425 612 252 103 24 chr20 55572687 55572977 -16580905 - L2 LINE L2 -832 2482 2170 2524 62 7 0 chr20 55573287 55573591 -16580291 + AluSx SINE Alu 3 308 -4 437 323 41 14 chr20 55573715 55573935 -16579947 + MIR SINE MIR 13 238 -24 452 300 160 0 chr20 55574093 55574293 -16579589 - MIR SINE MIR 0 262 31 1629 191 70 6 chr20 55574407 55574748 -16579134 + L1ME2 LINE L1 5492 5854 -310 229 345 9 9 chr20 55575675 55575785 -16578097 + L2 LINE L2 3199 3308 -5 1885 189 101 12 chr20 55575788 55576216 -16577666 - MER31B LTR ERV1 0 466 1 769 199 16 27 chr20 55576604 55576790 -16577092 - MER20B DNA MER1_type 0 783 600 730 254 60 18 chr20 55577010 55577227 -16576655 - MER20B DNA MER1_type -465 318 93 1341 209 51 3 chr20 55577347 55577658 -16576224 + LTR37A LTR ERV1 101 426 0 269 256 37 12 chr20 55577662 55577744 -16576138 - MER20B DNA MER1_type -699 84 1 486 0 0 0 chr20 55577749 55577803 -16576079 + (CA)n Simple_repeat Simple_repeat 1 54 0 296 258 65 65 chr20 55578820 55579080 -16574802 + L2 LINE L2 2814 3073 -240 2123 113 0 7 chr20 55579085 55579377 -16574505 + AluSx SINE Alu 1 290 -22 295 288 0 0 chr20 55579475 55579548 -16574334 - Tigger5 DNA MER2_type 0 2323 2251 989 144 11 39 chr20 55579561 55579741 -16574141 - Tigger5 DNA MER2_type 0 2323 2149 415 167 0 15 chr20 55579708 55579774 -16574108 - Tigger5 DNA MER2_type -2258 65 1 * 470 197 28 49 chr20 55579797 55579939 -16573943 + L2 LINE L2 3172 3310 -3 250 272 96 22 chr20 55580362 55580498 -16573384 - L2 LINE L2 -213 3059 2914 226 0 59 0 chr20 55630612 55630646 -16523236 + (TTTTG)n Simple_repeat Simple_repeat 5 40 0 1817 103 0 32 chr20 55630646 55630898 -16522984 - AluSx SINE Alu -32 280 37 2051 193 16 0 chr20 55630909 55631340 -16522542 - L1M4 LINE L1 -404 5774 5337 970 195 54 61 chr20 55631320 55631633 -16522249 - L1M4 LINE L1 -6218 324 14 * 641 218 58 107 chr20 55631658 55631919 -16521963 - MIR SINE MIR -1 261 14 223 296 74 90 chr20 55632313 55632502 -16521380 + L2 LINE L2 3128 3313 0 3270 134 14 5 chr20 55632539 55633104 -16520778 - LTR24B LTR ERV1 -6 570 1 297 311 45 23 chr20 55633147 55633279 -16520603 - MIR SINE MIR 0 262 128 805 252 101 5 chr20 55633539 55633757 -16520125 - MIR SINE MIR -23 239 1 439 305 121 78 chr20 55633849 55634262 -16519620 - MLT1K LTR MaLR 0 588 158 215 316 25 13 chr20 55634777 55634856 -16519026 - MIR SINE MIR -32 230 151 351 208 146 7 chr20 55635005 55635149 -16518733 + MLT1L LTR MaLR 126 289 -326 851 287 120 8 chr20 55635213 55635901 -16517981 + L2 LINE L2 2544 3313 0 191 200 0 0 chr20 55636123 55636163 -16517719 - MIR SINE MIR -191 71 32 339 240 30 10 chr20 55637037 55637137 -16516745 - MLT2C2 LTR ERVL -3 461 360 225 0 0 0 chr20 55637529 55637554 -16516328 + (TCC)n Simple_repeat Simple_repeat 2 26 0 762 306 151 7 chr20 55637644 55638089 -16515793 + L2 LINE L2 2538 3045 -268 1802 200 63 25 chr20 55638089 55638146 -16515736 - MLT2C2 LTR ERVL 0 464 411 252 0 0 0 chr20 55638146 55638174 -16515708 + (GA)n Simple_repeat Simple_repeat 1 28 0 1802 200 63 25 chr20 55638174 55638368 -16515514 - MLT2C2 LTR ERVL -53 411 226 2219 138 0 24 chr20 55638368 55638709 -16515173 - MER1B DNA MER1_type 0 337 5 1802 200 63 25 chr20 55638709 55638902 -16514980 - MLT2C2 LTR ERVL -238 226 2 1109 264 72 8 chr20 55639009 55639384 -16514498 + LTR16C LTR ERVL 87 485 -6 193 272 86 62 chr20 55639491 55639572 -16514310 + L2 LINE L2 3229 3311 -2 343 276 0 0 chr20 55640146 55640233 -16513649 - MLT1L LTR MaLR -5 610 524 342 257 20 20 chr20 55640276 55640377 -16513505 + L2 LINE L2 3197 3297 -16 2317 103 0 19 chr20 55640461 55640780 -16513102 + AluSq SINE Alu 1 313 0 1095 273 98 23 chr20 55641774 55642246 -16511636 - L2 LINE L2 -2 3311 2805 394 307 18 26 chr20 55642280 55642394 -16511488 - L2 LINE L2 0 3313 3201 470 246 120 0 chr20 55644964 55645106 -16508776 + MIR SINE MIR 32 190 -72 462 294 82 30 chr20 55645107 55645338 -16508544 + L2 LINE L2 3003 3245 -68 1122 264 43 70 chr20 55645338 55645891 -16507991 + MER34 LTR ERV1 2 539 -3 211 342 0 13 chr20 55645893 55645972 -16507910 + L2 LINE L2 3195 3272 0 612 303 80 45 chr20 55646111 55646805 -16507077 - L2 LINE L2 -1 3312 2545 1152 272 80 30 chr20 55648409 55648495 -16505387 + L2 LINE L2 2439 2519 -794 1630 194 70 12 chr20 55648495 55648840 -16505042 - MLT1A1 LTR MaLR 0 365 1 1152 272 80 30 chr20 55648840 55649379 -16504503 + L2 LINE L2 2519 3104 -209 207 0 0 0 chr20 55649379 55649402 -16504480 + (CA)n Simple_repeat Simple_repeat 1 23 0 1152 272 80 30 chr20 55649402 55649577 -16504305 + L2 LINE L2 3104 3269 -44 1190 95 6 0 chr20 55649587 55649594 -16504288 + (TGGA)n Simple_repeat Simple_repeat 1 187 0 1190 95 6 0 chr20 55649594 55649773 -16504109 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 505 298 92 8 chr20 55650080 55650318 -16503564 + Charlie8 DNA MER1_type 31 288 -2129 500 271 61 57 chr20 55650717 55650946 -16502936 - MIR SINE MIR -31 231 2 382 304 50 46 chr20 55651427 55651710 -16502172 - MER20B DNA MER1_type -44 739 456 2040 113 20 13 chr20 55651810 55652111 -16501771 + AluSp SINE Alu 1 303 -10 574 267 93 10 chr20 55652246 55652557 -16501325 + LTR16C LTR ERVL 154 490 -1 308 304 41 23 chr20 55652560 55652731 -16501151 - MER20B DNA MER1_type -515 268 95 804 249 57 102 chr20 55653027 55653381 -16500501 + MER102b DNA MER1_type 1 338 -3 185 339 17 0 chr20 55653429 55653488 -16500394 + MIR SINE MIR 158 217 -45 739 306 29 8 chr20 55653551 55653793 -16500089 + MIR SINE MIR 1 247 -15 309 109 0 0 chr20 55654014 55654060 -16499822 + (ATG)n Simple_repeat Simple_repeat 3 48 0 532 312 137 10 chr20 55654202 55654407 -16499475 - MIR SINE MIR -11 251 21 239 102 0 20 chr20 55654751 55654800 -16499082 + (TCTCC)n Simple_repeat Simple_repeat 4 51 0 830 242 202 3 chr20 55654970 55655301 -16498581 - MLT1K LTR MaLR -106 482 86 465 226 72 22 chr20 55655331 55655512 -16498370 + LTR67 LTR ERVL 328 517 -40 391 276 27 28 chr20 55655539 55655682 -16498200 - MIR3 SINE MIR -62 146 15 259 362 138 0 chr20 55656257 55656475 -16497407 + L2 LINE L2 2548 2795 -519 227 269 67 20 chr20 55656481 55656630 -16497252 + LTR33 LTR ERVL 1 156 -365 285 205 41 33 chr20 55656697 55656802 -16497080 + L2 LINE L2 2882 2985 -287 254 346 44 31 chr20 55656832 55656991 -16496891 - L2 LINE L2 -911 2403 2243 194 333 11 11 chr20 55657185 55657275 -16496607 + L2 LINE L2 3183 3272 0 342 301 115 19 chr20 55658397 55658553 -16495329 + MIR SINE MIR 79 249 -13 2600 29 7 3 chr20 55658723 55659033 -16494849 + AluY SINE Alu 1 311 0 306 326 0 11 chr20 55659351 55659443 -16494439 - L2 LINE L2 -2 3311 3221 582 250 23 34 chr20 55659552 55659728 -16494154 - MIR SINE MIR -60 202 29 222 136 0 0 chr20 55659741 55659785 -16494097 + (TGAA)n Simple_repeat Simple_repeat 2 45 0 955 273 85 18 chr20 55659987 55660605 -16493277 + L2 LINE L2 2601 3261 -52 2313 87 3 0 chr20 55660642 55660940 -16492942 + AluSq SINE Alu 2 300 -13 204 343 10 40 chr20 55661274 55661373 -16492509 + L2 LINE L2 3209 3304 -9 890 295 145 8 chr20 55661422 55661844 -16492038 - L2 LINE L2 -275 3038 2575 282 206 15 118 chr20 55662593 55662649 -16491233 - MLT1K LTR MaLR -22 566 506 1957 142 4 0 chr20 55662649 55662924 -16490958 + AluSx SINE Alu 37 312 0 282 206 15 118 chr20 55662924 55663003 -16490879 - MLT1K LTR MaLR -82 506 445 277 303 79 0 chr20 55663210 55663299 -16490583 - MER91A DNA MER1_type 0 196 101 341 308 17 0 chr20 55663329 55663449 -16490433 - MLT1K LTR MaLR -421 167 46 1212 214 76 78 chr20 55663531 55663595 -16490287 - MSTD LTR MaLR 0 396 333 1900 166 0 35 chr20 55663595 55663914 -16489968 + AluJb SINE Alu 1 308 -4 1212 214 76 78 chr20 55663914 55664195 -16489687 - MSTD LTR MaLR -63 333 50 1795 177 0 22 chr20 55664195 55664506 -16489376 - AluJb SINE Alu -8 304 1 1212 214 76 78 chr20 55664506 55664556 -16489326 - MSTD LTR MaLR -346 50 1 1038 249 98 23 chr20 55664563 55665121 -16488761 - L2 LINE L2 -129 3184 2507 1046 253 37 6 chr20 55665583 55665911 -16487971 - MLT1K LTR MaLR -33 555 218 897 222 181 54 chr20 55665911 55666353 -16487529 + MLT1D LTR MaLR 1 498 -7 591 330 80 9 chr20 55667386 55667598 -16486284 + MIR SINE MIR 25 251 -11 315 303 67 0 chr20 55668047 55668166 -16485716 - MIR3 SINE MIR 0 208 82 2265 106 0 0 chr20 55669224 55669533 -16484349 + AluSx SINE Alu 1 309 0 483 341 62 9 chr20 55669533 55669744 -16484138 - MIR SINE MIR -8 254 33 2214 100 13 13 chr20 55669800 55670111 -16483771 + AluSq SINE Alu 1 311 -2 285 295 82 49 chr20 55670573 55670756 -16483126 + MIR SINE MIR 74 262 0 2483 83 83 6 chr20 55671458 55671795 -16482087 - THE1B LTR MaLR 0 364 2 372 209 35 26 chr20 55671982 55672097 -16481785 - L2 LINE L2 -895 2419 2304 376 240 91 16 chr20 55672645 55672766 -16481116 - MIR SINE MIR -61 147 18 331 278 139 25 chr20 55673038 55673319 -16480563 + MLT1K LTR MaLR 93 405 -183 538 277 13 7 chr20 55673545 55673700 -16480182 - MLT1K LTR MaLR -282 306 151 522 254 130 6 chr20 55674172 55674341 -16479541 + MIR SINE MIR 59 248 -14 752 287 117 19 chr20 55674461 55674695 -16479187 + L2 LINE L2 2712 2921 -392 2592 114 14 3 chr20 55674695 55675055 -16478827 + THE1B LTR MaLR 1 364 0 752 287 117 19 chr20 55675055 55675250 -16478632 + L2 LINE L2 2921 3179 -134 1972 170 96 15 chr20 55675630 55676025 -16477857 - MSTA LTR MaLR -1 427 1 225 187 286 22 chr20 55676359 55676450 -16477432 - L2 LINE L2 0 3272 3158 713 303 25 20 chr20 55676634 55676987 -16476895 - L1ME2 LINE L1 -10 6154 5800 1132 221 5 18 chr20 55677012 55677234 -16476648 + AluJo SINE Alu 1 219 -93 1494 163 0 0 chr20 55677350 55677577 -16476305 - AluJb SINE Alu 0 312 86 1323 204 25 94 chr20 55677578 55677970 -16475912 + MLT1A1 LTR MaLR 1 365 0 387 0 0 0 chr20 55679481 55679524 -16474358 + (TG)n Simple_repeat Simple_repeat 1 43 0 1331 265 52 10 chr20 55679641 55680195 -16473687 + L2 LINE L2 2576 3154 -159 417 257 189 61 chr20 55680617 55680913 -16472969 + Charlie8 DNA MER1_type 92 425 -1992 711 266 34 46 chr20 55681689 55681848 -16472034 + MIR SINE MIR 21 178 -84 1829 181 140 41 chr20 55681848 55682153 -16471729 - MER34 LTR ERV1 0 542 168 2625 62 0 0 chr20 55682153 55682461 -16471421 + AluY SINE Alu 1 308 -3 1829 181 140 41 chr20 55682461 55682647 -16471235 - MER34 LTR ERV1 -374 168 2 711 266 34 46 chr20 55682647 55682724 -16471158 + MIR SINE MIR 178 254 -8 317 279 109 82 chr20 55682797 55682868 -16471014 + MER102a DNA MER1_type 29 97 -1320 1938 153 30 0 chr20 55682868 55683169 -16470713 - AluSx SINE Alu -2 310 1 317 279 109 82 chr20 55683169 55683391 -16470491 + MER102a DNA MER1_type 97 330 0 911 308 65 13 chr20 55684588 55685062 -16468820 + L2 LINE L2 2369 2867 -447 251 290 204 12 chr20 55685411 55685666 -16468216 - MER113 DNA MER1_type? -62 459 156 2764 128 9 39 chr20 55686130 55686589 -16467293 + MER65A LTR ERV1 1 445 0 543 53 0 0 chr20 55686935 55687010 -16466872 + (TG)n Simple_repeat Simple_repeat 2 76 0 185 281 31 47 chr20 55687265 55687329 -16466553 + MIR SINE MIR 15 77 -185 593 321 49 8 chr20 55687723 55687969 -16465913 + L2 LINE L2 2586 2841 -473 219 306 19 19 chr20 55688475 55688583 -16465299 + L2 LINE L2 2782 2889 -425 2068 125 0 17 chr20 55689296 55689622 -16464260 - AluSx SINE Alu 0 321 1 239 269 60 97 chr20 55689665 55689799 -16464083 + MIR3 SINE MIR 52 156 -52 189 0 0 0 chr20 55689884 55689905 -16463977 + (GA)n Simple_repeat Simple_repeat 2 22 0 245 320 66 8 chr20 55690249 55690371 -16463511 + L2 LINE L2 2598 2726 -588 223 299 160 21 chr20 55690473 55690667 -16463215 + L2 LINE L2 2708 2928 -386 2134 229 104 51 chr20 55690705 55691472 -16462410 - MER21B LTR ERV1 -51 812 5 1146 285 65 8 chr20 55691490 55691859 -16462023 + L2 LINE L2 2924 3313 0 2264 129 67 48 chr20 55692265 55692658 -16461224 + MSTC LTR MaLR 1 404 -24 5216 135 24 33 chr20 55692658 55693212 -16460670 + MER4D LTR ERV1 1 545 -358 2073 137 13 0 chr20 55693212 55693511 -16460371 - AluSx SINE Alu -9 303 1 5216 135 24 33 chr20 55693511 55693867 -16460015 + MER4D LTR ERV1 545 903 0 2264 129 67 48 chr20 55693867 55693893 -16459989 + MSTC LTR MaLR 404 428 0 316 271 73 20 chr20 55693893 55694044 -16459838 + LTR33 LTR ERVL 237 395 -126 653 260 24 18 chr20 55694044 55694213 -16459669 + MIR SINE MIR 93 262 0 278 388 60 0 chr20 55694258 55694441 -16459441 - MIR SINE MIR -57 205 12 425 157 26 9 chr20 55694492 55694593 -16459289 - MER20 DNA MER1_type -57 162 59 300 215 0 0 chr20 55694554 55694619 -16459263 + MER20 DNA MER1_type 155 219 0 * 1380 174 80 36 chr20 55694643 55694945 -16458937 + L1MDa LINE L1 2244 2568 -3972 2411 126 83 5 chr20 55694945 55695342 -16458540 - MSTA LTR MaLR 0 428 1 1380 174 80 36 chr20 55695342 55695429 -16458453 + L1MDa LINE L1 2568 2650 -3890 * 6663 243 55 46 chr20 55695427 55696074 -16457808 + L1MD2 LINE L1 2010 2650 -3890 2165 130 0 3 chr20 55696074 55696374 -16457508 + AluSq SINE Alu 1 299 -14 6663 243 55 46 chr20 55696374 55698740 -16455142 + L1MD2 LINE L1 2650 5034 -1506 597 289 4 56 chr20 55699134 55699383 -16454499 - L1MDa LINE L1 -6271 269 34 2177 208 42 6 chr20 55699398 55700110 -16453772 + L1MD2 LINE L1 5976 6751 -2 2087 123 38 0 chr20 55700254 55700547 -16453335 - AluSx SINE Alu -8 304 1 266 298 24 12 chr20 55702102 55702186 -16451696 + L2 LINE L2 3187 3271 -1 1860 169 7 0 chr20 55704086 55704370 -16449512 - AluJb SINE Alu -26 286 1 274 322 78 39 chr20 55704497 55704677 -16449205 + MIR SINE MIR 6 192 -70 183 348 169 8 chr20 55704867 55704985 -16448897 - L2 LINE L2 -2 3270 3134 312 321 33 43 chr20 55705207 55705391 -16448491 + L1MCa LINE L1 7 188 -6238 1055 222 43 0 chr20 55705468 55705675 -16448207 + MER20 DNA MER1_type 4 219 0 956 276 98 8 chr20 55705677 55706097 -16447785 + L2 LINE L2 2585 3043 -270 342 136 0 17 chr20 55706126 55706185 -16447697 + L2 LINE L2 3256 3313 0 234 315 63 16 chr20 55706290 55706417 -16447465 + MIR3 SINE MIR 13 145 -63 391 173 37 12 chr20 55706444 55706525 -16447357 - L2 LINE L2 -5 3267 3185 775 217 28 38 chr20 55706535 55706747 -16447135 - MLT1E3 LTR MaLR -24 600 391 358 223 156 3 chr20 55706774 55706948 -16446934 - MLT1E2 LTR MaLR -360 266 6 1012 309 68 23 chr20 55706953 55707423 -16446459 - L2 LINE L2 -324 2989 2494 635 233 48 0 chr20 55708063 55708209 -16445673 + MER45A DNA AcHobo 6 158 -20 1718 173 39 0 chr20 55708803 55708930 -16444952 + AluJo SINE Alu 3 124 -188 234 0 0 0 chr20 55708930 55708956 -16444926 + (CAA)n Simple_repeat Simple_repeat 2 27 0 1718 173 39 0 chr20 55708956 55709087 -16444795 + AluJo SINE Alu 124 275 -37 189 0 0 0 chr20 55709087 55709108 -16444774 + (GA)n Simple_repeat Simple_repeat 2 22 0 1718 173 39 0 chr20 55709108 55709132 -16444750 + AluJo SINE Alu 275 297 -15 587 160 70 51 chr20 55709637 55709793 -16444089 - LTR45B LTR ERV1 0 489 331 250 176 0 20 chr20 55710008 55710059 -16443823 - MER72 LTR ERV1 -243 479 430 224 301 29 58 chr20 55710566 55710669 -16443213 - L2 LINE L2 -34 3238 3139 499 198 10 0 chr20 55710727 55710823 -16443059 - MER97b DNA MER1_type? -938 115 19 654 276 215 19 chr20 55710867 55711230 -16442652 + L2 LINE L2 2879 3312 -1 383 286 20 0 chr20 55711236 55711334 -16442548 + MIR SINE MIR 41 140 -122 357 316 0 0 chr20 55711901 55711996 -16441886 + GA-rich Low_complexity Low_complexity 1 95 0 529 257 9 0 chr20 55712232 55712345 -16441537 + MER81 DNA DNA 1 114 0 1247 237 128 22 chr20 55712363 55712810 -16441072 + MLT1D LTR MaLR 12 505 0 2268 111 100 5 chr20 55713198 55713587 -16440295 - MSTA LTR MaLR -2 426 1 332 115 19 0 chr20 55713663 55713715 -16440167 + MER74B LTR ERVL 1 53 -569 920 232 160 22 chr20 55713775 55713962 -16439920 + MER74B LTR ERVL 193 353 -269 192 77 0 0 chr20 55713962 55713988 -16439894 + (CCCTG)n Simple_repeat Simple_repeat 5 30 0 920 232 160 22 chr20 55713988 55714162 -16439720 + MER74B LTR ERVL 353 604 -18 284 333 109 42 chr20 55714845 55715202 -16438680 + HERVL74 LTR ERVL 622 1002 -4683 29 0 0 0 chr20 55715442 55715471 -16438411 + AT_rich Low_complexity Low_complexity 1 29 0 2030 138 0 3 chr20 55715563 55715868 -16438014 - AluSx SINE Alu -4 308 5 184 291 55 0 chr20 55716095 55716150 -16437732 + MIR SINE MIR 72 129 -79 972 298 58 22 chr20 55716626 55717075 -16436807 + L2 LINE L2 2847 3311 -2 262 167 26 90 chr20 55717481 55717559 -16436323 - MLT1I LTR MaLR -265 144 72 222 37 0 0 chr20 55717694 55717721 -16436161 + (GA)n Simple_repeat Simple_repeat 2 28 0 472 234 240 23 chr20 55718419 55718594 -16435288 + Charlie2 DNA MER1_type 10 222 -2560 902 232 132 48 chr20 55718598 55718952 -16434930 - LTR33 LTR ERVL -3 518 126 4158 89 9 4 chr20 55718952 55719503 -16434379 - MER41A LTR ERV1 0 554 1 902 232 132 48 chr20 55719503 55719541 -16434341 - LTR33 LTR ERVL -395 126 93 * 1524 235 210 20 chr20 55719540 55720203 -16433679 + Charlie2 DNA MER1_type 2030 2818 -44 240 86 0 0 chr20 55720536 55720571 -16433311 + (CAA)n Simple_repeat Simple_repeat 1 35 0 324 209 186 84 chr20 55720582 55720799 -16433083 - MIR SINE MIR -9 253 30 2653 171 52 42 chr20 55720900 55721466 -16432416 + MER41C LTR ERV1 2 554 0 200 262 0 49 chr20 55721472 55721533 -16432349 - L2 LINE L2 -14 3299 3242 918 260 88 62 chr20 55721925 55722325 -16431557 - MLT1J LTR MaLR 0 511 102 1867 143 17 0 chr20 55722388 55722682 -16431200 - AluJb SINE Alu -13 299 1 494 269 8 22 chr20 55723162 55723296 -16430586 - LTR67 LTR ERVL -40 517 386 718 179 26 66 chr20 55723304 55723455 -16430427 - AluJo SINE Alu -145 167 23 707 283 175 21 chr20 55724690 55725068 -16428814 - MLT1K LTR MaLR -9 579 144 2304 168 57 2 chr20 55725153 55725557 -16428325 - MSTB LTR MaLR 0 426 1 2268 143 11 6 chr20 55726138 55726502 -16427380 - MER47A DNA MER2_type 0 366 1 201 213 0 0 chr20 55726510 55726557 -16427325 + (TATATG)n Simple_repeat Simple_repeat 1 47 0 625 269 6 19 chr20 55726766 55726926 -16426956 - MIR SINE MIR -40 222 65 584 301 64 40 chr20 55726927 55727256 -16426626 + MLT1I LTR MaLR 51 387 -22 2165 157 49 40 chr20 55727418 55727846 -16426036 - MSTB1 LTR MaLR 0 432 1 450 251 27 44 chr20 55728084 55728287 -16425595 - MIR SINE MIR -4 258 1 354 318 56 37 chr20 55728381 55728595 -16425287 - MIR SINE MIR -40 222 5 356 203 16 81 chr20 55728643 55728766 -16425116 + Charlie8 DNA MER1_type 103 217 -2200 215 152 22 0 chr20 55729519 55729565 -16424317 + CT-rich Low_complexity Low_complexity 3 49 0 693 297 103 51 chr20 55729582 55730010 -16423872 - L2 LINE L2 -13 3300 2851 2007 103 3 7 chr20 55730256 55730568 -16423314 + AluSx SINE Alu 1 311 0 292 298 128 72 chr20 55730608 55730913 -16422969 - L2 LINE L2 -4 3268 2947 564 213 27 37 chr20 55730927 55731088 -16422794 + MIR SINE MIR 99 256 -6 270 241 145 24 chr20 55731344 55731427 -16422455 + MIR SINE MIR 63 155 -107 1740 202 63 59 chr20 55731488 55731983 -16421899 + MLT1D LTR MaLR 1 497 -8 207 294 33 43 chr20 55732018 55732110 -16421772 + L2 LINE L2 3173 3263 -9 204 282 141 0 chr20 55732723 55732794 -16421088 - MIR SINE MIR -73 189 109 467 221 59 52 chr20 55732794 55732930 -16420952 - L2 LINE L2 -1 3312 3176 417 248 187 57 chr20 55734819 55735081 -16418801 + Charlie2 DNA MER1_type 45 340 -2522 380 237 59 35 chr20 55735101 55735270 -16418612 + Charlie2 DNA MER1_type 2232 2404 -458 435 38 0 0 chr20 55735287 55735340 -16418542 + (TG)n Simple_repeat Simple_repeat 2 54 0 1956 134 46 0 chr20 55735349 55735655 -16418227 - MER2 DNA MER2_type -25 320 1 273 57 0 0 chr20 55735655 55735690 -16418192 + (CA)n Simple_repeat Simple_repeat 1 35 0 291 71 0 0 chr20 55735690 55735732 -16418150 + (TC)n Simple_repeat Simple_repeat 1 42 0 378 0 0 0 chr20 55736060 55736102 -16417780 + (T)n Simple_repeat Simple_repeat 1 42 0 674 267 132 30 chr20 55736364 55736735 -16417147 + MLT1I LTR MaLR 1 409 0 532 263 157 48 chr20 55738010 55738341 -16415541 - MLT1K LTR MaLR -3 585 219 1494 281 92 27 chr20 55739928 55740484 -16413398 - MLT1E LTR MaLR -1 592 1 626 266 75 80 chr20 55741528 55741916 -16411966 + MLT1I LTR MaLR 22 407 -2 2222 79 3 0 chr20 55741982 55742272 -16411610 + AluSx SINE Alu 6 296 -16 275 165 0 118 chr20 55743079 55743164 -16410718 - MLT1G1 LTR MaLR -17 578 504 382 254 41 16 chr20 55744074 55744196 -16409686 + MIR SINE MIR 19 143 -65 1083 247 29 4 chr20 55744221 55744464 -16409418 + MIR SINE MIR 14 262 0 450 272 25 86 chr20 55744558 55744801 -16409081 - MIR SINE MIR -8 254 27 276 149 21 0 chr20 55744871 55744918 -16408964 - L2 LINE L2 -1 3312 3265 740 126 26 0 chr20 55744939 55745090 -16408792 + (TCCA)n Simple_repeat Simple_repeat 4 158 0 430 326 76 25 chr20 55746341 55746657 -16407225 + MLT1J LTR MaLR 27 358 -153 22 35 0 0 chr20 55747002 55747031 -16406851 + AT_rich Low_complexity Low_complexity 1 29 0 183 255 21 0 chr20 55747151 55747198 -16406684 - MIR3 SINE MIR -2 206 159 230 314 39 29 chr20 55747326 55747428 -16406454 + MLT1K LTR MaLR 172 274 -314 2255 70 0 10 chr20 55747516 55747814 -16406068 + AluY SINE Alu 1 295 -16 396 263 0 53 chr20 55747891 55748005 -16405877 + MER94 DNA DNA 6 113 -21 343 252 48 10 chr20 55748123 55748226 -16405656 + MER94 DNA DNA 1 107 -27 352 229 47 59 chr20 55748543 55748713 -16405169 - L1MC4a LINE L1 -1763 6045 5878 799 216 7 7 chr20 55748759 55748912 -16404970 + FRAM SINE Alu 1 153 -23 862 301 51 15 chr20 55749006 55749338 -16404544 - L1MC4a LINE L1 -2039 5769 5426 1733 119 45 35 chr20 55749614 55749900 -16403982 - AluJb SINE Alu -23 289 1 2216 92 10 3 chr20 55749901 55750205 -16403677 - AluSx SINE Alu -6 306 1 207 88 0 0 chr20 55750729 55750763 -16403119 + (TTTTTG)n Simple_repeat Simple_repeat 2 35 0 1145 254 146 31 chr20 55750979 55751815 -16402067 + L2 LINE L2 2376 3313 0 184 284 93 86 chr20 55752417 55752579 -16401303 + MIR SINE MIR 15 177 -85 226 273 57 0 chr20 55752704 55752792 -16401090 - MIR SINE MIR -90 172 80 3703 141 55 91 chr20 55753192 55754006 -16399876 - LTR1 LTR ERV1 0 785 1 1958 117 19 13 chr20 55754758 55755065 -16398817 + AluSc SINE Alu 1 309 0 305 301 18 49 chr20 55755144 55755307 -16398575 - L1MC4a LINE L1 -1917 5891 5734 1027 284 56 28 chr20 55755309 55755703 -16398179 + MLT1I LTR MaLR 5 409 0 549 298 110 12 chr20 55757173 55757428 -16396454 + MLT1K LTR MaLR 15 294 -294 469 309 146 0 chr20 55757903 55758081 -16395801 + MLT1K LTR MaLR 323 526 -62 2090 85 0 0 chr20 55758110 55758380 -16395502 - AluSx SINE Alu -8 304 35 418 264 194 19 chr20 55758512 55758770 -16395112 + L1MC/D LINE L1 5292 5594 -2214 308 248 176 20 chr20 55758795 55758948 -16394934 - LTR33A LTR ERVL 0 523 347 2772 260 55 11 chr20 55759105 55760355 -16393527 + L1MDa LINE L1 17 1482 -5058 1144 295 143 25 chr20 55760351 55760463 -16393419 - HAL1 LINE L1 -43 2464 2367 * 2097 111 0 0 chr20 55760463 55760791 -16393091 - AluSc SINE Alu 0 309 1 1144 295 143 25 chr20 55760791 55761652 -16392230 - HAL1 LINE L1 -140 2367 1376 272 277 161 9 chr20 55762724 55762836 -16391046 - MER5B DNA MER1_type -29 149 21 242 309 151 16 chr20 55762729 55762855 -16391027 + MER5A DNA MER1_type 46 188 -1 * 192 77 0 0 chr20 55762883 55762909 -16390973 + (T)n Simple_repeat Simple_repeat 1 26 0 1078 61 0 0 chr20 55762909 55763041 -16390841 - AluY SINE Alu -179 132 1 564 309 125 32 chr20 55763088 55763289 -16390593 - L1M4b LINE L1 -4106 3032 2851 1881 147 10 0 chr20 55763289 55763582 -16390300 - AluSx SINE Alu -16 296 1 564 309 125 32 chr20 55763582 55764093 -16389789 - L1M4b LINE L1 -4287 2851 2254 795 264 105 40 chr20 55764123 55764331 -16389551 - L1M4b LINE L1 -4823 2138 1945 2506 55 0 16 chr20 55764331 55764640 -16389242 - AluY SINE Alu -7 304 1 795 264 105 40 chr20 55764640 55765139 -16388743 - L1M4b LINE L1 -5016 1945 1260 815 270 29 0 chr20 55766051 55766255 -16387627 + MIR SINE MIR 8 217 -45 241 328 34 50 chr20 55766372 55766491 -16387391 - MIR3 SINE MIR -50 158 42 210 287 42 60 chr20 55767055 55767222 -16386660 + L2 LINE L2 2364 2527 -787 395 278 128 4 chr20 55767256 55767597 -16386285 + L2 LINE L2 2768 3147 -166 269 232 14 0 chr20 55767709 55767778 -16386104 - L2 LINE L2 -39 3274 3205 325 210 153 32 chr20 55768056 55768180 -16385702 - MIR SINE MIR -40 222 84 1163 265 72 25 chr20 55768789 55769235 -16384647 + MLT1C LTR MaLR 1 467 0 374 284 17 17 chr20 55769684 55769800 -16384082 + MIR3 SINE MIR 85 200 -8 727 300 104 19 chr20 55769850 55770695 -16383187 - L2 LINE L2 0 3313 2392 548 144 0 19 chr20 55771275 55771379 -16382503 + (GGGA)n Simple_repeat Simple_repeat 3 104 0 384 22 0 0 chr20 55772659 55772704 -16381178 + (TG)n Simple_repeat Simple_repeat 2 46 0 708 288 101 40 chr20 55773533 55773860 -16380022 - MLT1K LTR MaLR 0 588 242 320 245 43 0 chr20 55774085 55774179 -16379703 - MLT1K LTR MaLR -492 98 1 * 358 245 80 49 chr20 55774179 55774337 -16379545 + LTR16C LTR ERVL 329 491 0 1729 186 10 22 chr20 55775039 55775351 -16378531 - AluJo SINE Alu -3 309 2 328 288 68 92 chr20 55775554 55775804 -16378078 - MIR SINE MIR -4 258 15 246 106 0 85 chr20 55775832 55775879 -16378003 + MER53 DNA DNA 1 43 -146 538 226 32 0 chr20 55776221 55776376 -16377506 + MER113 DNA MER1_type? 46 205 -316 2630 118 13 5 chr20 55776376 55776748 -16377134 + THE1C LTR MaLR 1 375 0 2426 101 0 13 chr20 55776787 55777104 -16376778 + AluSq SINE Alu 1 313 0 21 36 0 0 chr20 55777221 55777249 -16376633 + AT_rich Low_complexity Low_complexity 1 28 0 250 281 45 34 chr20 55777915 55778004 -16375878 + MLT1G1 LTR MaLR 487 576 -19 5445 144 16 0 chr20 55779052 55779957 -16373925 + L1PA11 LINE L1 5254 6172 -2 2658 75 5 48 chr20 55779983 55780254 -16373628 + L1PB2 LINE L1 5767 6017 -134 2251 117 3 0 chr20 55780254 55780561 -16373321 + AluSg SINE Alu 3 310 0 2658 75 5 48 chr20 55780561 55780689 -16373193 + L1PB2 LINE L1 6017 6149 -2 31 0 0 0 chr20 55780689 55780720 -16373162 + AT_rich Low_complexity Low_complexity 1 31 0 278 238 29 38 chr20 55781930 55782035 -16371847 + LTR33 LTR ERVL 44 147 -374 557 289 32 0 chr20 55782585 55782775 -16371107 + MIR SINE MIR 53 248 -14 2259 126 20 12 chr20 55782887 55783228 -16370654 - MER2 DNA MER2_type 0 344 1 339 333 148 29 chr20 55783467 55784562 -16369320 + L2 LINE L2 2035 3271 -1 267 311 58 39 chr20 55785835 55786092 -16367790 - LTR16C LTR ERVL -92 399 138 244 319 100 44 chr20 55786310 55786470 -16367412 + L2 LINE L2 2957 3125 -147 323 270 28 77 chr20 55786775 55786999 -16366883 + MLT1L LTR MaLR 111 407 -193 273 250 11 68 chr20 55787195 55787283 -16366599 - MIR3 SINE MIR -1 207 125 460 280 72 32 chr20 55787433 55787683 -16366199 - MIR SINE MIR -1 261 2 308 303 25 66 chr20 55787895 55788093 -16365789 - MER102a DNA MER1_type -25 305 116 2007 185 23 45 chr20 55788171 55788292 -16365590 - L1MB7 LINE L1 -16 6666 6544 796 203 0 0 chr20 55788292 55788425 -16365457 - FLAM_A SINE Alu 0 133 1 2007 185 23 45 chr20 55788425 55788473 -16365409 - L1MB7 LINE L1 -138 6544 6496 2185 102 20 3 chr20 55788473 55788776 -16365106 + AluSg SINE Alu 3 310 0 2007 185 23 45 chr20 55788776 55789541 -16364341 - L1MB7 LINE L1 -186 6496 5824 5738 226 66 23 chr20 55789577 55791204 -16362678 - L1MB7 LINE L1 -4839 1703 8 230 314 12 12 chr20 55791245 55791331 -16362551 - MER102a DNA MER1_type -241 89 4 187 233 14 82 chr20 55791383 55791456 -16362426 - MIR3 SINE MIR -7 201 134 651 286 74 95 chr20 55791538 55792066 -16361816 + MLT1K LTR MaLR 2 518 -70 192 40 0 0 chr20 55792073 55792098 -16361784 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 284 350 68 57 chr20 55792340 55792780 -16361102 + L2 LINE L2 210 654 -2660 579 271 128 0 chr20 55792814 55793002 -16360880 + MIR SINE MIR 51 262 0 2793 96 3 0 chr20 55793471 55793834 -16360048 + THE1B LTR MaLR 1 364 0 1100 322 61 11 chr20 55795100 55795625 -16358257 - MLT1K LTR MaLR 0 588 38 303 28 0 0 chr20 55795673 55795709 -16358173 + (A)n Simple_repeat Simple_repeat 1 36 0 757 252 70 16 chr20 55796053 55796366 -16357516 - MER113 DNA MER1_type? -44 477 148 919 188 40 10 chr20 55796408 55796610 -16357272 - L1MB3 LINE L1 0 6183 5976 353 275 152 12 chr20 55796731 55796902 -16356980 - L3 LINE CR1 -23 1554 1360 418 293 131 16 chr20 55797071 55797262 -16356620 + MLT1K LTR MaLR 16 228 -360 559 262 110 0 chr20 55797545 55797709 -16356173 - MIR SINE MIR -59 203 22 751 272 39 45 chr20 55798802 55799114 -16354768 + MLT1J LTR MaLR 3 312 -199 470 188 0 0 chr20 55799132 55799217 -16354665 + MER2 DNA MER2_type 38 122 -223 253 330 28 50 chr20 55799219 55799401 -16354481 + MLT1J LTR MaLR 334 511 0 732 273 176 31 chr20 55800168 55800593 -16353289 + L2 LINE L2 2826 3312 -1 214 291 76 0 chr20 55800638 55800717 -16353165 + MIR SINE MIR 66 150 -112 396 341 92 39 chr20 55800954 55801291 -16352591 - L2 LINE L2 -2 3270 2916 195 281 61 0 chr20 55801388 55801470 -16352412 - L2 LINE L2 -652 2662 2576 1733 212 24 5 chr20 55801478 55801856 -16352026 - L1MB7 LINE L1 0 6184 5800 297 289 82 15 chr20 55801912 55802047 -16351835 + L2 LINE L2 2814 2957 -357 1498 181 23 7 chr20 55802065 55802364 -16351518 + MER2 DNA MER2_type 42 345 0 226 0 59 0 chr20 55802381 55802415 -16351467 + (TTTTG)n Simple_repeat Simple_repeat 5 40 0 1855 100 0 62 chr20 55802415 55802675 -16351207 - AluSx SINE Alu -32 280 37 2139 187 16 0 chr20 55802686 55803109 -16350773 - L1MB7 LINE L1 -404 5774 5345 1023 185 58 64 chr20 55803097 55803410 -16350472 - L1M4 LINE L1 -6218 324 14 * 672 218 58 107 chr20 55803435 55803696 -16350186 - MIR SINE MIR -1 261 14 233 265 7 125 chr20 55804143 55804279 -16349603 + L2 LINE L2 3153 3272 0 3470 136 14 5 chr20 55804316 55804881 -16349001 - LTR24B LTR ERV1 -6 570 1 286 214 103 60 chr20 55804933 55805050 -16348832 - MIR SINE MIR -7 255 134 826 202 119 23 chr20 55805316 55805534 -16348348 - MIR SINE MIR -23 239 1 434 294 126 82 chr20 55805626 55806078 -16347804 - MLT1K LTR MaLR 0 588 117 190 316 25 13 chr20 55806553 55806632 -16347250 - MIR SINE MIR -32 230 151 360 198 126 92 chr20 55806781 55806988 -16346894 + MLT1L LTR MaLR 126 339 -276 791 268 130 17 chr20 55806989 55807677 -16346205 + L2 LINE L2 2544 3313 0 193 200 0 0 chr20 55807899 55807939 -16345943 - MIR SINE MIR -191 71 32 349 211 33 11 chr20 55808814 55808904 -16344978 - MLT2C2 LTR ERVL -3 461 370 225 0 0 0 chr20 55809306 55809331 -16344551 + (TCC)n Simple_repeat Simple_repeat 2 26 0 745 292 155 11 chr20 55809421 55809866 -16344016 + L2 LINE L2 2538 3045 -268 1848 197 63 25 chr20 55809866 55809923 -16343959 - MLT2C2 LTR ERVL 0 464 411 270 0 0 0 chr20 55809923 55809953 -16343929 + (GA)n Simple_repeat Simple_repeat 1 30 0 1848 197 63 25 chr20 55809953 55810147 -16343735 - MLT2C2 LTR ERVL -53 411 226 2209 138 0 24 chr20 55810147 55810488 -16343394 - MER1B DNA MER1_type 0 337 5 1848 197 63 25 chr20 55810488 55810681 -16343201 - MLT2C2 LTR ERVL -238 226 2 1075 267 72 8 chr20 55810788 55811163 -16342719 + LTR16C LTR ERVL 87 485 -6 339 276 0 0 chr20 55811925 55812012 -16341870 - MLT1L LTR MaLR -5 610 524 306 228 50 50 chr20 55812055 55812156 -16341726 + L2 LINE L2 3197 3297 -16 2420 103 0 19 chr20 55812240 55812559 -16341323 + AluSq SINE Alu 1 313 0 1075 248 112 38 chr20 55813552 55814024 -16339858 - L2 LINE L2 -2 3311 2805 395 307 18 26 chr20 55814058 55814172 -16339710 - L2 LINE L2 0 3313 3201 433 246 120 0 chr20 55816742 55816884 -16336998 + MIR SINE MIR 32 190 -72 407 294 87 35 chr20 55816885 55817116 -16336766 + L2 LINE L2 3003 3245 -68 1204 259 45 72 chr20 55817116 55817669 -16336213 + MER34 LTR ERV1 2 539 -3 189 289 0 60 chr20 55817671 55817754 -16336128 + L2 LINE L2 3195 3272 0 492 286 73 60 chr20 55817889 55818343 -16335539 - L2 LINE L2 -1 3312 2853 1080 267 80 29 chr20 55820187 55820273 -16333609 + L2 LINE L2 2439 2519 -794 1452 197 70 12 chr20 55820273 55820618 -16333264 - MLT1A1 LTR MaLR 0 365 1 1080 267 80 29 chr20 55820618 55821157 -16332725 + L2 LINE L2 2519 3105 -208 252 0 0 0 chr20 55821157 55821185 -16332697 + (CA)n Simple_repeat Simple_repeat 1 28 0 1080 267 80 29 chr20 55821185 55821359 -16332523 + L2 LINE L2 3105 3269 -44 1151 107 6 0 chr20 55821376 55821554 -16332328 + (TGGA)n Simple_repeat Simple_repeat 1 179 0 531 299 95 12 chr20 55821839 55822080 -16331802 + MER102b DNA MER1_type 39 299 -42 477 257 63 59 chr20 55822479 55822701 -16331181 - MIR SINE MIR -31 231 9 381 290 56 48 chr20 55823207 55823459 -16330423 - MER20B DNA MER1_type -62 721 468 2237 113 20 0 chr20 55823572 55823874 -16330008 + AluSp SINE Alu 1 308 -5 601 254 103 19 chr20 55824009 55824320 -16329562 + LTR16C LTR ERVL 154 490 -1 314 304 41 23 chr20 55824323 55824494 -16329388 - MER20B DNA MER1_type -515 268 95 658 246 60 102 chr20 55824790 55825143 -16328739 + MER102b DNA MER1_type 1 338 -3 667 302 29 8 chr20 55825313 55825555 -16328327 + MIR SINE MIR 1 247 -15 309 109 0 0 chr20 55825776 55825822 -16328060 + (ATG)n Simple_repeat Simple_repeat 3 48 0 473 299 137 15 chr20 55825972 55826169 -16327713 - MIR SINE MIR -21 241 21 1659 158 0 8 chr20 55826490 55826743 -16327139 + AluJb SINE Alu 1 251 -61 185 358 139 11 chr20 55827084 55827271 -16326611 + L2 LINE L2 2512 2722 -592 464 296 30 35 chr20 55827274 55827473 -16326409 + LTR67 LTR ERVL 4 201 -356 436 267 82 24 chr20 55827532 55827738 -16326144 + LTR67 LTR ERVL 340 557 0 721 297 54 0 chr20 55828287 55828509 -16325373 + MIR SINE MIR 29 262 0 2387 59 0 36 chr20 55828520 55828823 -16325059 - AluY SINE Alu -19 292 1 782 228 70 37 chr20 55829027 55829268 -16324614 + MIR SINE MIR 8 256 -6 590 260 7 7 chr20 55829985 55830131 -16323751 + MIR SINE MIR 3 148 -114 537 307 126 22 chr20 55830200 55830431 -16323451 - MIR SINE MIR -6 256 2 887 294 59 32 chr20 55830611 55831054 -16322828 - MLT1L LTR MaLR -6 609 155 635 303 154 23 chr20 55831210 55831645 -16322237 - MLT1J LTR MaLR -19 492 1 197 313 36 12 chr20 55831840 55831923 -16321959 - MIR SINE MIR -79 129 45 1802 238 37 35 chr20 55833078 55833570 -16320312 + MLT1D LTR MaLR 3 495 -10 385 376 15 10 chr20 55833840 55834045 -16319837 - MIR SINE MIR -1 261 56 408 236 87 31 chr20 55834145 55834272 -16319610 - MER94 DNA DNA 0 134 1 200 382 0 0 chr20 55834368 55834436 -16319446 + MIR SINE MIR 28 96 -112 1913 160 17 7 chr20 55834609 55834909 -16318973 + AluJo SINE Alu 1 303 -9 239 296 183 0 chr20 55835337 55835452 -16318430 + L2 LINE L2 2590 2725 -589 378 264 170 22 chr20 55835570 55835752 -16318130 + L2 LINE L2 3104 3312 -1 348 127 0 0 chr20 55835759 55835814 -16318068 + (GGGA)n Simple_repeat Simple_repeat 4 58 0 668 257 53 58 chr20 55836246 55836472 -16317410 + MIR SINE MIR 10 234 -28 376 260 14 0 chr20 55836688 55836834 -16317048 + (CCCA)n Simple_repeat Simple_repeat 3 150 0 713 244 26 49 chr20 55836879 55837169 -16316713 + L2 LINE L2 2775 3061 -252 1326 224 43 0 chr20 55837176 55837453 -16316429 - AluJo SINE Alu -23 289 1 700 190 0 0 chr20 55837468 55837589 -16316293 - FLAM_C SINE Alu -21 122 2 620 297 38 38 chr20 55837589 55837852 -16316030 + L2 LINE L2 3051 3313 0 374 360 54 43 chr20 55838000 55838278 -16315604 - L1 LINE L1 -1071 5075 4795 1912 171 0 0 chr20 55838632 55838937 -16314945 - AluJb SINE Alu -7 305 1 898 287 17 0 chr20 55839435 55839672 -16314210 - MIR SINE MIR -21 241 1 304 77 0 0 chr20 55840661 55840713 -16313169 - AluSp/q SINE Alu 0 303 252 1555 269 64 35 chr20 55840779 55840956 -16312926 + L2 LINE L2 2163 2333 -981 1714 190 14 24 chr20 55840956 55841325 -16312557 + MLT1A1 LTR MaLR 1 365 0 1555 269 64 35 chr20 55841325 55841743 -16312139 + L2 LINE L2 2333 2775 -539 1726 159 71 11 chr20 55841860 55842212 -16311670 + THE1C LTR MaLR 3 375 0 2334 89 0 29 chr20 55842597 55842913 -16310969 - AluY SINE Alu -4 307 1 2396 89 0 0 chr20 55842918 55843242 -16310640 - AluY SINE Alu 0 324 1 181 338 21 35 chr20 55843480 55843622 -16310260 + L2 LINE L2 2332 2471 -843 2368 82 0 23 chr20 55843698 55844001 -16309881 + AluSx SINE Alu 1 296 -16 2217 132 0 3 chr20 55844204 55844508 -16309374 + AluSx SINE Alu 5 307 -5 471 249 52 108 chr20 55844565 55844691 -16309191 - MLT1J LTR MaLR -175 336 229 2178 157 44 2 chr20 55844691 55845100 -16308782 - MSTB LTR MaLR 0 426 1 471 249 52 108 chr20 55845100 55845222 -16308660 - MLT1J LTR MaLR -282 229 102 424 255 96 0 chr20 55845304 55845461 -16308421 - L1ME LINE L1 -420 5701 5530 310 315 8 0 chr20 55845862 55845989 -16307893 - L2 LINE L2 -314 2999 2872 588 233 0 0 chr20 55845991 55846094 -16307788 - MER81 DNA DNA -1 113 11 299 358 0 0 chr20 55846089 55846184 -16307698 - MER81 DNA DNA -19 95 1 * 319 285 145 30 chr20 55846266 55846598 -16307284 + MLT1J LTR MaLR 75 410 -40 247 322 47 23 chr20 55847417 55847588 -16306294 - MLT1K LTR MaLR -1 587 413 234 194 0 65 chr20 55847814 55847876 -16306006 + MLT2D LTR ERVL 229 286 -128 234 275 159 0 chr20 55848463 55848532 -16305350 + MLT2D LTR ERVL 238 317 -97 226 210 0 65 chr20 55849738 55849800 -16304082 + MLT2D LTR ERVL 229 286 -128 359 314 87 30 chr20 55853786 55854050 -16299832 + L2 LINE L2 2698 2976 -338 332 259 37 52 chr20 55854135 55854270 -16299612 + L2 LINE L2 2904 3036 -236 322 111 93 0 chr20 55854403 55854457 -16299425 + MADE1 DNA Mariner 1 59 -21 278 109 0 73 chr20 55854481 55854536 -16299346 + MADE1 DNA Mariner 30 80 0 208 273 220 30 chr20 55854540 55854672 -16299210 + L2 LINE L2 3155 3311 -2 287 250 65 97 chr20 55855209 55855425 -16298457 - MLT1L LTR MaLR -272 343 135 910 263 88 55 chr20 55855908 55856363 -16297519 + MER90 LTR ERV1 55 575 0 522 276 13 39 chr20 55856439 55856671 -16297211 + L1MC5 LINE L1 7306 7531 -430 353 288 98 63 chr20 55856749 55856954 -16296928 + L1ME3A LINE L1 5959 6170 0 397 331 60 5 chr20 55856997 55857181 -16296701 - L2 LINE L2 -657 2657 2464 337 225 45 72 chr20 55857505 55857616 -16296266 - L1M4 LINE L1 -2473 3673 3566 1400 204 0 25 chr20 55858042 55858322 -16295560 - AluJo SINE Alu -39 273 1 7468 171 12 12 chr20 55859187 55860696 -16293186 - L1MB1 LINE L1 -787 5359 3851 4335 150 18 15 chr20 55860697 55861491 -16292391 + L1MB1 LINE L1 5373 6168 0 852 302 74 41 chr20 55862485 55862999 -16290883 - MLT1L LTR MaLR -77 538 8 982 256 136 54 chr20 55863196 55863734 -16290148 + LTR1B LTR ERV1 33 614 -212 294 345 35 0 chr20 55863952 55864065 -16289817 + MER20B DNA MER1_type 28 144 -639 384 265 68 6 chr20 55864975 55865137 -16288745 + LTR33 LTR ERVL 3 174 -347 407 225 159 0 chr20 55865638 55865776 -16288106 - MER5B DNA MER1_type -10 168 9 3927 144 8 3 chr20 55865883 55866515 -16287367 - MER41B LTR ERV1 0 635 1 289 253 154 24 chr20 55866744 55866968 -16286914 + L2 LINE L2 2728 2987 -285 1113 149 0 18 chr20 55867065 55867233 -16286649 - AluSg/x SINE Alu -18 294 130 281 251 118 56 chr20 55867639 55867834 -16286048 - MLT1J LTR MaLR -18 493 287 2939 156 74 60 chr20 55867943 55868660 -16285222 + LTR8A LTR ERV1 1 727 0 263 297 58 26 chr20 55868671 55868826 -16285056 + HAL1 LINE L1 2347 2506 -1 314 287 90 15 chr20 55869409 55869545 -16284337 + MIR3 SINE MIR 10 156 -52 1273 134 14 18 chr20 55869940 55870157 -16283725 - MER20 DNA MER1_type -2 217 2 278 351 18 0 chr20 55870166 55870280 -16283602 - MIR SINE MIR -73 135 20 248 293 43 43 chr20 55871539 55871638 -16282244 + MIR SINE MIR 33 134 -128 228 35 0 0 chr20 55871638 55871667 -16282215 + (TG)n Simple_repeat Simple_repeat 2 30 0 248 293 43 43 chr20 55871667 55871683 -16282199 + MIR SINE MIR 133 148 -114 296 221 52 13 chr20 55871698 55871775 -16282107 - MER116 DNA Mariner 0 80 1 204 282 0 26 chr20 55871787 55871865 -16282017 + MIR SINE MIR 187 262 0 2126 155 47 27 chr20 55871959 55872496 -16281386 - MLT2A2 LTR ERVL -2 552 1 542 314 69 5 chr20 55872813 55873001 -16280881 + MIR SINE MIR 57 256 -6 201 222 0 0 chr20 55874142 55874205 -16279677 + (CAGAGA)n Simple_repeat Simple_repeat 2 64 0 871 213 56 0 chr20 55874591 55874788 -16279094 + MIR SINE MIR 2 209 -53 263 252 58 86 chr20 55874844 55874983 -16278899 + MIR SINE MIR 50 184 -78 215 253 32 53 chr20 55874996 55875091 -16278791 + L2 LINE L2 3151 3243 -70 735 219 55 0 chr20 55875104 55875250 -16278632 + MER45A DNA AcHobo 1 154 -24 974 268 66 36 chr20 55875603 55876044 -16277838 - MLT1C LTR MaLR -2 465 12 542 299 56 26 chr20 55876130 55876364 -16277518 - MIR SINE MIR -21 241 1 226 376 101 0 chr20 55876499 55876648 -16277234 - Charlie8 DNA MER1_type -2249 168 5 817 279 97 74 chr20 55877433 55877907 -16275975 + MLT1K LTR MaLR 97 581 -7 222 328 16 0 chr20 55878607 55878671 -16275211 - L2 LINE L2 0 3272 3208 226 290 16 0 chr20 55878753 55878815 -16275067 - MER117 DNA MER1_type -33 164 102 330 299 38 25 chr20 55878849 55879006 -16274876 - MLT1I LTR MaLR 0 409 251 820 200 83 24 chr20 55879012 55879107 -16274775 - MER20 DNA MER1_type 0 219 131 2581 155 26 7 chr20 55879107 55879565 -16274317 + MLT1C LTR MaLR 1 467 0 820 200 83 24 chr20 55879565 55879674 -16274208 - MER20 DNA MER1_type -88 131 3 353 258 21 11 chr20 55879718 55879811 -16274071 - MLT1H LTR MaLR -347 202 109 271 273 39 0 chr20 55880805 55880882 -16273000 + MIR SINE MIR 6 85 -177 342 317 75 28 chr20 55880882 55881132 -16272750 + MLT1F1 LTR MaLR 1 249 -341 387 281 13 20 chr20 55881581 55881734 -16272148 + GA-rich Low_complexity Low_complexity 2 153 0 296 296 108 33 chr20 55882598 55882838 -16271044 - L2 LINE L2 -61 3252 2995 3326 145 65 47 chr20 55883150 55883854 -16270028 - LTR8A LTR ERV1 -2 725 9 4117 126 10 2 chr20 55883860 55884488 -16269394 + MER41B LTR ERV1 1 633 -2 187 319 87 0 chr20 55884765 55884834 -16269048 - MIR3 SINE MIR -49 159 85 244 123 0 53 chr20 55885006 55885063 -16268819 + (TCCC)n Simple_repeat Simple_repeat 3 56 0 439 243 28 42 chr20 55885794 55885938 -16267944 - L2 LINE L2 -9 3304 3163 218 268 0 6 chr20 55886465 55886633 -16267249 + (TG)n Simple_repeat Simple_repeat 1 167 0 2305 88 7 0 chr20 55886780 55887115 -16266767 + AluSq SINE Alu 1 337 0 226 264 0 0 chr20 55888830 55888883 -16264999 + MIR SINE MIR 210 262 0 398 274 132 59 chr20 55888917 55888953 -16264929 + MER113 DNA MER1_type? 5 37 -484 1779 120 71 8 chr20 55888953 55889256 -16264626 - AluJb SINE Alu 0 320 1 398 274 132 59 chr20 55889256 55889590 -16264292 + MER113 DNA MER1_type? 37 403 -118 260 132 59 73 chr20 55889792 55889860 -16264022 + MIR3 SINE MIR 121 187 -21 816 239 97 0 chr20 55890245 55890483 -16263399 + LTR43 LTR ERV1 176 436 -166 450 208 0 0 chr20 55890854 55891008 -16262874 + (CA)n Simple_repeat Simple_repeat 2 155 0 343 147 0 21 chr20 55891021 55891116 -16262766 + (CA)n Simple_repeat Simple_repeat 1 93 0 213 298 18 0 chr20 55891116 55891173 -16262709 + L2 LINE L2 3200 3257 -56 627 315 102 3 chr20 55891189 55891484 -16262398 - L2 LINE L2 0 3313 2990 467 300 91 9 chr20 55891511 55891721 -16262161 + L2 LINE L2 3085 3311 -2 931 188 48 10 chr20 55892293 55892501 -16261381 - MIR SINE MIR -16 246 31 698 221 40 7 chr20 55892933 55893154 -16260728 + MIR SINE MIR 19 248 -14 487 300 120 34 chr20 55894243 55894626 -16259256 - L1ME3A LINE L1 -272 5898 5483 464 296 54 10 chr20 55894785 55894988 -16258894 + MIR SINE MIR 35 246 -16 332 264 81 7 chr20 55895492 55895640 -16258242 - MER113 DNA MER1_type? -55 466 308 1744 169 15 0 chr20 55895641 55895944 -16257938 - AluJo SINE Alu 0 313 7 2309 104 0 0 chr20 55895957 55896246 -16257636 - AluSx SINE Alu -17 295 7 1331 189 43 105 chr20 55896620 55896930 -16256952 - L1MB7 LINE L1 -7 6177 5849 228 35 0 0 chr20 55896930 55896959 -16256923 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 1730 188 0 0 chr20 55896968 55897244 -16256638 - AluJo SINE Alu -36 276 1 1331 189 43 105 chr20 55897244 55897388 -16256494 - L1MB7 LINE L1 -343 5841 5742 237 218 0 0 chr20 55897391 55897469 -16256413 + GA-rich Low_complexity Low_complexity 1 78 0 291 291 53 53 chr20 55897537 55897688 -16256194 + MIR3 SINE MIR 43 193 -15 268 250 17 67 chr20 55897829 55897949 -16255933 - MLT1K LTR MaLR -10 578 465 * 276 331 99 23 chr20 55897936 55898108 -16255774 - MER45C DNA AcHobo -507 446 262 438 204 21 0 chr20 55898138 55898231 -16255651 - MER45C DNA AcHobo -785 168 74 223 241 0 58 chr20 55898705 55898792 -16255090 + C-rich Low_complexity Low_complexity 3 84 0 476 284 73 61 chr20 55899444 55899705 -16254177 - L2 LINE L2 -9 3304 3041 788 292 115 7 chr20 55899763 55900105 -16253777 + MLT1J2 LTR MaLR 1 391 -55 490 237 21 0 chr20 55900130 55900227 -16253655 - MER81 DNA DNA -15 99 1 458 287 41 51 chr20 55900275 55900470 -16253412 - MIR SINE MIR -67 195 3 192 419 43 8 chr20 55900687 55900804 -16253078 + L2 LINE L2 3141 3261 -11 1050 259 119 9 chr20 55901512 55901855 -16252027 + MLT1K LTR MaLR 181 561 -27 417 215 96 57 chr20 55902088 55902265 -16251617 + LTR33A LTR ERVL 6 189 -334 569 302 72 68 chr20 55903399 55903664 -16250218 + MER21B LTR ERV1 338 603 -260 851 259 70 62 chr20 55903996 55904370 -16249512 - MER21B LTR ERV1 -169 694 318 2788 136 7 84 chr20 55904645 55905183 -16248699 - LOR1a LTR ERV1 0 497 1 266 346 10 20 chr20 55905218 55905319 -16248563 - MIR SINE MIR -161 101 2 782 248 67 0 chr20 55905325 55905535 -16248347 - MLT1K LTR MaLR -2 586 363 1810 254 111 18 chr20 55905551 55906139 -16247743 + MLT1G LTR MaLR 1 590 0 583 297 93 38 chr20 55906139 55906452 -16247430 - MLT1K LTR MaLR -255 333 4 467 320 88 25 chr20 55906577 55907273 -16246609 - L2 LINE L2 -220 3052 2307 837 214 29 6 chr20 55907500 55907795 -16246087 - MLT1A1 LTR MaLR -1 415 1 552 291 37 0 chr20 55908149 55908338 -16245544 - MIR SINE MIR -14 248 53 1661 134 12 0 chr20 55908612 55908858 -16245024 - AluSx SINE Alu -63 249 1 293 311 65 3 chr20 55909068 55909232 -16244650 - LTR33A LTR ERVL -311 210 44 1468 175 135 17 chr20 55910025 55910221 -16243661 - MLT1B LTR MaLR 0 390 218 2781 102 39 0 chr20 55910221 55910633 -16243249 - MSTA LTR MaLR 0 428 1 1468 175 135 17 chr20 55910633 55910785 -16243097 - MLT1B LTR MaLR -172 218 1 396 0 0 0 chr20 55911951 55911995 -16241887 + (ATGTG)n Simple_repeat Simple_repeat 1 44 0 2356 110 88 15 chr20 55912035 55912434 -16241448 - MSTA LTR MaLR 0 428 1 724 196 4 28 chr20 55912853 55913424 -16240458 + (CACCAT)n Simple_repeat Simple_repeat 1 556 0 288 281 0 0 chr20 55913389 55913556 -16240326 + (CAT)n Simple_repeat Simple_repeat 2 168 0 * 570 224 48 30 chr20 55914362 55914522 -16239360 - LTR16C LTR ERVL 0 491 329 1877 252 117 8 chr20 55914522 55915050 -16238832 + MLT1G LTR MaLR 1 586 -4 852 308 53 19 chr20 55915201 55915562 -16238320 + L2 LINE L2 2936 3308 -5 358 292 114 32 chr20 55915624 55915843 -16238039 - L2 LINE L2 -218 3054 2818 2347 112 0 0 chr20 55916078 55916374 -16237508 - AluSx SINE Alu -16 296 1 774 284 124 30 chr20 55916908 55917310 -16236572 + MLT1K LTR MaLR 149 588 0 218 293 102 24 chr20 55918990 55919157 -16234725 + MIR SINE MIR 83 262 0 2586 160 31 0 chr20 55919223 55919636 -16234246 + MSTB LTR MaLR 1 426 0 24 32 0 0 chr20 55919718 55919749 -16234133 + AT_rich Low_complexity Low_complexity 1 31 0 330 293 9 9 chr20 55919816 55919922 -16233960 + CT-rich Low_complexity Low_complexity 2 107 0 705 307 103 21 chr20 55920511 55921353 -16232529 + L2 LINE L2 2398 3313 0 365 284 17 17 chr20 55921403 55921519 -16232363 - MIR3 SINE MIR -8 200 85 287 206 68 0 chr20 55922298 55922371 -16231511 + L2 LINE L2 3209 3286 -27 412 255 155 21 chr20 55922522 55922851 -16231031 - L2 LINE L2 -217 3096 2727 197 316 19 32 chr20 55922855 55923010 -16230872 - L2 LINE L2 -794 2520 2368 272 372 0 33 chr20 55923579 55923700 -16230182 + MIR3 SINE MIR 42 158 -50 753 313 14 0 chr20 55923816 55924030 -16229852 - MIR SINE MIR -45 217 1 261 0 0 0 chr20 55924032 55924061 -16229821 + (TTA)n Simple_repeat Simple_repeat 2 30 0 1131 326 85 14 chr20 55925202 55925488 -16228394 + L1MDb LINE L1 1094 1358 -5088 1796 168 3 3 chr20 55925488 55925792 -16228090 + AluJb SINE Alu 1 304 -8 1131 326 85 14 chr20 55925792 55926321 -16227561 + L1MDb LINE L1 1358 2007 -4439 645 341 78 34 chr20 55926324 55926708 -16227174 + L1MDb LINE L1 2059 2459 -4128 297 257 158 10 chr20 55926786 55926887 -16226995 - MER5A DNA MER1_type -19 170 55 276 252 159 28 chr20 55926794 55926901 -16226981 + MER5B DNA MER1_type 30 150 -28 * 282 116 0 0 chr20 55927825 55927868 -16226014 + (A)n Simple_repeat Simple_repeat 1 43 0 391 185 179 53 chr20 55927912 55928063 -16225819 - L1MC2 LINE L1 0 6344 6175 359 273 25 91 chr20 55928064 55928262 -16225620 + HAL1 LINE L1 1975 2159 -348 1342 162 88 69 chr20 55928266 55928611 -16225271 - L1MA9 LINE L1 0 6312 5989 1288 120 10 0 chr20 55928619 55928811 -16225071 - AluJb SINE Alu -32 280 87 537 229 168 48 chr20 55928841 55929133 -16224749 + HAL1 LINE L1 2177 2503 -4 512 304 92 49 chr20 55929191 55929560 -16224322 + L2 LINE L2 2455 2839 -475 215 108 0 162 chr20 55929772 55929846 -16224036 + (T)n Simple_repeat Simple_repeat 1 62 0 1108 131 0 11 chr20 55929858 55930033 -16223849 + FRAM SINE Alu 4 176 0 2262 85 3 10 chr20 55930035 55930341 -16223541 + AluSp SINE Alu 1 304 -9 245 164 370 0 chr20 55930355 55930428 -16223454 + L1MA9 LINE L1 6000 6099 -213 643 194 0 0 chr20 55930431 55930539 -16223343 - AluJ SINE Alu -203 109 2 28 48 0 0 chr20 55931069 55931111 -16222771 + AT_rich Low_complexity Low_complexity 1 42 0 2054 121 10 0 chr20 55931330 55931628 -16222254 - AluSx SINE Alu -11 301 1 357 247 45 87 chr20 55931628 55931892 -16221990 - L1MC2 LINE L1 -303 5818 5659 450 279 179 10 chr20 55931922 55932123 -16221759 - MLT1K LTR MaLR -24 564 330 387 325 114 16 chr20 55932632 55932887 -16220995 - MLT1K LTR MaLR -294 294 15 1094 180 163 54 chr20 55934378 55934666 -16219216 - MLT1D LTR MaLR 0 505 185 1956 146 0 3 chr20 55934666 55934975 -16218907 - AluSx SINE Alu -1 311 4 1572 145 8 11 chr20 55934985 55935019 -16218863 + L1PA8A LINE L1 5297 5330 -801 3490 92 38 4 chr20 55935019 55935517 -16218365 - L1PA13 LINE L1 -11 6152 5638 1572 145 8 11 chr20 55935517 55935551 -16218331 + L1PA8A LINE L1 5330 5363 -768 2122 96 3 13 chr20 55935551 55935863 -16218019 + AluY SINE Alu 1 309 -2 1572 145 8 11 chr20 55935863 55936098 -16217784 + L1PA8A LINE L1 5363 5597 -534 990 193 37 5 chr20 55936098 55936285 -16217597 - MLT1D LTR MaLR -312 193 1 881 249 45 86 chr20 55936298 55936340 -16217542 - MLT1I LTR MaLR -5 404 362 2191 103 0 10 chr20 55936340 55936652 -16217230 + AluSc SINE Alu 1 309 0 881 249 45 86 chr20 55936652 55936693 -16217189 - MLT1I LTR MaLR -47 362 321 2534 48 0 6 chr20 55936693 55937005 -16216877 - AluY SINE Alu -1 310 1 881 249 45 86 chr20 55937005 55937341 -16216541 - MLT1I LTR MaLR -88 321 1 1980 139 149 8 chr20 55937384 55937759 -16216123 + MSTA LTR MaLR 1 428 0 26 0 0 0 chr20 55938092 55938118 -16215764 + AT_rich Low_complexity Low_complexity 1 26 0 334 287 46 56 chr20 55938288 55938483 -16215399 - MIR3 SINE MIR -15 193 1 * 401 209 54 62 chr20 55938483 55938610 -16215272 + MIR SINE MIR 27 152 -56 2011 134 0 0 chr20 55938860 55939158 -16214724 + AluSx SINE Alu 1 298 -14 181 296 112 0 chr20 55939970 55940095 -16213787 + MIR SINE MIR 34 172 -90 259 254 107 49 chr20 55940261 55940383 -16213499 - MIR SINE MIR -119 143 15 1891 137 13 3 chr20 55940778 55941078 -16212804 + AluSx SINE Alu 1 303 -9 207 0 0 0 chr20 55941279 55941302 -16212580 + (TTCA)n Simple_repeat Simple_repeat 1 23 0 775 255 122 17 chr20 55941307 55941437 -16212445 - L2 LINE L2 -21 3292 3177 2446 53 3 3 chr20 55941437 55941740 -16212142 + AluY SINE Alu 1 303 -8 775 255 122 17 chr20 55941740 55942133 -16211749 - L2 LINE L2 -136 3177 2714 1076 258 84 38 chr20 55942140 55942686 -16211196 - MLT1E LTR MaLR -2 591 7 370 319 110 53 chr20 55942687 55942969 -16210913 - L2 LINE L2 -600 2714 2417 26 0 0 0 chr20 55943065 55943091 -16210791 + AT_rich Low_complexity Low_complexity 1 26 0 320 303 90 37 chr20 55944312 55944500 -16209382 + L2 LINE L2 3062 3259 -13 321 336 68 36 chr20 55944982 55945202 -16208680 - MLT1K LTR MaLR -306 282 56 382 298 30 23 chr20 55945210 55945341 -16208541 + L2 LINE L2 3182 3313 0 2166 153 65 32 chr20 55945702 55946114 -16207768 - MSTB LTR MaLR 0 426 1 260 358 17 8 chr20 55946483 55946603 -16207279 - LTR67 LTR ERVL -3 554 434 1933 134 0 0 chr20 55946959 55947272 -16206610 - AluSx SINE Alu 0 313 1 221 294 0 0 chr20 55947483 55947534 -16206348 + L2 LINE L2 3263 3313 0 704 238 58 100 chr20 55947620 55948100 -16205782 + LTR37B LTR ERV1 9 468 0 201 147 0 0 chr20 55948291 55948325 -16205557 + (TTC)n Simple_repeat Simple_repeat 2 35 0 698 309 101 25 chr20 55948425 55948939 -16204943 + LTR67 LTR ERVL 5 557 0 545 273 104 57 chr20 55949645 55950030 -16203852 - MLT1J LTR MaLR -67 444 42 1752 151 80 11 chr20 55950199 55950550 -16203332 + THE1C LTR MaLR 1 375 0 1393 177 3 68 chr20 55950626 55950920 -16202962 + AluJb SINE Alu 1 275 -37 51 0 0 0 chr20 55950926 55950977 -16202905 + AT_rich Low_complexity Low_complexity 1 51 0 21 36 0 0 chr20 55951165 55951193 -16202689 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr20 55951430 55951452 -16202430 + AT_rich Low_complexity Low_complexity 1 22 0 1213 219 58 128 chr20 55951483 55952022 -16201860 - L1MD2 LINE L1 -216 6143 5643 198 71 0 0 chr20 55952081 55952109 -16201773 + (TG)n Simple_repeat Simple_repeat 1 28 0 1883 144 0 7 chr20 55952232 55952523 -16201359 - AluJb SINE Alu -23 289 1 2478 153 30 14 chr20 55952750 55953176 -16200706 - Tigger2a DNA MER2_type 0 434 2 541 294 33 48 chr20 55953452 55953724 -16200158 - MLT1I LTR MaLR -2 407 140 268 221 25 139 chr20 55953747 55953869 -16200013 + MER21B LTR ERV1 352 459 -404 268 323 26 32 chr20 55953892 55954047 -16199835 - MLT1I LTR MaLR -253 156 3 1619 159 11 0 chr20 55955338 55955608 -16198274 - AluJo SINE Alu -39 273 1 411 316 63 38 chr20 55955991 55956228 -16197654 + MLT1L LTR MaLR 205 447 -168 1030 76 0 14 chr20 55956677 55956821 -16197061 - AluSq/x SINE Alu -171 142 1 407 261 71 72 chr20 55957319 55957689 -16196193 + MLT1K LTR MaLR 189 586 -2 588 263 144 26 chr20 55957835 55958029 -16195853 + MIR SINE MIR 22 238 -24 634 279 213 43 chr20 55958373 55958865 -16195017 + MLT1K LTR MaLR 13 588 0 271 200 0 17 chr20 55960140 55960200 -16193682 - MLT1I LTR MaLR -8 401 343 231 204 20 0 chr20 55960777 55960826 -16193056 - Charlie2 DNA MER1_type -140 2722 2673 1064 193 55 40 chr20 55960826 55961100 -16192782 + pTR5 LTR ERV1 746 1023 -1415 1042 212 96 18 chr20 55961154 55961489 -16192393 + pTR5 LTR ERV1 984 1344 -1094 4457 130 68 39 chr20 55961505 55962304 -16191578 + LTR12 LTR ERV1 5 826 0 540 229 303 17 chr20 55962304 55962652 -16191230 - Charlie2 DNA MER1_type -184 2678 2230 389 282 99 42 chr20 55962652 55962865 -16191017 - Charlie2 DNA MER1_type -2417 365 141 248 283 11 37 chr20 55963204 55963313 -16190569 + CT-rich Low_complexity Low_complexity 3 182 0 2098 119 0 7 chr20 55963833 55964136 -16189746 + AluSx SINE Alu 2 302 -10 2117 87 0 7 chr20 55964136 55964422 -16189460 + AluSg1 SINE Alu 25 308 -1 29 0 0 0 chr20 55964505 55964534 -16189348 + AT_rich Low_complexity Low_complexity 1 29 0 307 196 0 0 chr20 55964772 55964828 -16189054 - MLT1I LTR MaLR -2 407 352 2563 101 25 0 chr20 55965106 55965461 -16188421 + THE1B LTR MaLR 1 364 0 286 157 39 0 chr20 55965682 55965733 -16188149 + L2 LINE L2 3214 3266 -6 502 259 236 0 chr20 55966357 55966531 -16187351 - MIR SINE MIR -31 231 17 288 253 11 35 chr20 55966766 55966853 -16187029 - MIR SINE MIR -10 252 168 288 130 43 0 chr20 55967270 55967316 -16186566 - L2 LINE L2 0 3272 3225 393 274 312 0 chr20 55967350 55967536 -16186346 + MIR SINE MIR 6 249 -13 1100 92 74 0 chr20 55967724 55967887 -16185995 - AluY SINE Alu 0 311 137 248 239 0 15 chr20 55968134 55968201 -16185681 - MLT1I LTR MaLR -228 181 116 394 327 0 0 chr20 55968267 55968371 -16185511 + MIR SINE MIR 86 189 -73 516 295 159 4 chr20 55969100 55969327 -16184555 + MLT1K LTR MaLR 1 262 -326 428 260 141 23 chr20 55969393 55969570 -16184312 + MLT1K LTR MaLR 373 570 -18 1173 151 0 38 chr20 55969582 55969793 -16184089 - MER1B DNA MER1_type 0 339 137 1375 76 32 116 chr20 55969793 55969969 -16183913 + MER30 DNA MER1_type 1 151 -79 3918 18 18 0 chr20 55969969 55970419 -16183463 + L1PA2 LINE L1 5698 6155 0 1375 76 32 116 chr20 55970419 55970493 -16183389 + MER30 DNA MER1_type 151 230 0 890 166 7 0 chr20 55970493 55970632 -16183250 - MER1B DNA MER1_type -157 140 1 2011 126 3 0 chr20 55971402 55971695 -16182187 - AluSx SINE Alu -18 294 1 29 0 0 0 chr20 55971811 55971840 -16182042 + AT_rich Low_complexity Low_complexity 1 29 0 227 234 96 64 chr20 55971923 55972017 -16181865 + LTR67 LTR ERVL 405 501 -56 1034 287 110 14 chr20 55972489 55972918 -16180964 + MLT1J LTR MaLR 1 470 -41 1199 206 50 5 chr20 55973137 55973612 -16180270 + MER34 LTR ERV1 20 542 0 2020 108 4 0 chr20 55973853 55974132 -16179750 + AluSx SINE Alu 1 280 -32 1127 78 6 17 chr20 55974132 55974312 -16179570 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 44 70 0 0 chr20 55974920 55975006 -16178876 + AT_rich Low_complexity Low_complexity 1 86 0 2487 227 53 37 chr20 55975017 55975880 -16178002 - Charlie2 DNA MER1_type -109 2753 1877 322 221 39 63 chr20 55976044 55976171 -16177711 + LTR33 LTR ERVL 33 156 -365 654 274 157 4 chr20 55976210 55976458 -16177424 + LTR33 LTR ERVL 234 519 -2 1676 67 9 4 chr20 55976464 55976689 -16177193 - L1PA7 LINE L1 -4 6150 5925 462 301 8 0 chr20 55976725 55976848 -16177034 - Charlie2 DNA MER1_type -2652 130 7 2215 108 15 3 chr20 55976859 55977016 -16176866 - L1PB1 LINE L1 -48 6103 5947 2199 132 8 85 chr20 55977016 55977570 -16176312 - L1PA5 LINE L1 -207 5947 5469 23 33 0 0 chr20 55978269 55978299 -16175583 + AT_rich Low_complexity Low_complexity 1 30 0 286 276 97 22 chr20 55978381 55978515 -16175367 + MLT1I LTR MaLR 1 144 -265 202 216 39 20 chr20 55978892 55978943 -16174939 - L2 LINE L2 -6 3307 3256 2333 79 79 0 chr20 55979332 55979650 -16174232 - HERVL-A2 LTR ERVL -5311 343 1 3020 87 4 128 chr20 55979650 55980167 -16173715 - MLT2A2 LTR ERVL 0 453 1 683 308 176 0 chr20 55980367 55980708 -16173174 - L2 LINE L2 -17 3296 2896 1501 213 16 9 chr20 55981267 55981582 -16172300 - LTR53 LTR ERVL 0 519 203 1971 218 32 2 chr20 55981769 55982173 -16171709 + MER68 LTR ERV1 138 553 -9 240 200 0 0 chr20 55982751 55982801 -16171081 - L2 LINE L2 0 3313 3264 225 366 11 38 chr20 55982900 55983083 -16170799 + MLT1L LTR MaLR 20 197 -418 481 303 92 80 chr20 55983491 55983967 -16169915 + MLT1K LTR MaLR 85 566 -22 1571 189 3 7 chr20 55984178 55984469 -16169413 + AluJo SINE Alu 1 290 -22 2548 117 54 15 chr20 55984660 55985070 -16168812 - MSTA LTR MaLR 0 428 3 1323 62 351 0 chr20 55985271 55985482 -16168400 + LTR12 LTR ERV1 1 285 -429 329 211 33 11 chr20 55985482 55985572 -16168310 + LTR30 LTR ERV1 552 643 -79 792 81 0 17 chr20 55985573 55985689 -16168193 + LTR12 LTR ERV1 302 714 0 877 265 8 0 chr20 55985706 55985959 -16167923 + L1ME1 LINE L1 894 1148 -5261 * 2159 245 11 15 chr20 55985952 55986687 -16167195 + L1ME1 LINE L1 5302 6031 -743 769 115 0 9 chr20 55986707 55986814 -16167068 + MER4A LTR ERV1 1 106 -558 2637 151 30 44 chr20 55986814 55987311 -16166571 - LTR2B LTR ERV1 0 490 1 2586 122 138 72 chr20 55987311 55987837 -16166045 + MER4A LTR ERV1 98 659 -5 929 262 37 62 chr20 55987838 55988193 -16165689 + L1ME1 LINE L1 6056 6401 -25 22 0 0 0 chr20 55988268 55988290 -16165592 + AT_rich Low_complexity Low_complexity 1 22 0 2058 129 0 0 chr20 55989103 55989397 -16164485 - AluSx SINE Alu -18 294 1 255 290 28 69 chr20 55989478 55989623 -16164259 - MLT1K LTR MaLR 0 588 450 304 316 136 0 chr20 55989800 55989955 -16163927 - MIR SINE MIR 0 262 87 321 328 47 0 chr20 55989955 55990083 -16163799 - MER94 DNA DNA 0 134 1 330 333 42 19 chr20 55990140 55990356 -16163526 - MLT1K LTR MaLR -143 445 225 574 206 128 73 chr20 55990758 55990808 -16163074 - MER58C DNA MER1_type -2205 215 169 2175 94 7 3 chr20 55990808 55991106 -16162776 - AluY SINE Alu -10 301 3 574 206 128 73 chr20 55991106 55991259 -16162623 - MER58C DNA MER1_type -2251 169 1 1091 260 109 34 chr20 55991576 55991984 -16161898 + L2 LINE L2 2682 3058 -255 2276 113 35 32 chr20 55991984 55992356 -16161526 + THE1C LTR MaLR 1 373 -2 536 67 27 0 chr20 55992356 55992431 -16161451 - MADE1 DNA Mariner 0 80 4 1091 260 109 34 chr20 55992431 55992607 -16161275 + L2 LINE L2 3057 3313 0 406 246 47 63 chr20 55992684 55992875 -16161007 + MLT1K LTR MaLR 386 573 -15 332 272 85 76 chr20 55993132 55993356 -16160526 + MIR SINE MIR 21 246 -16 1226 167 14 9 chr20 55993478 55993700 -16160182 + AluJb SINE Alu 1 223 -89 527 151 0 0 chr20 55993754 55993840 -16160042 + AluJb SINE Alu 221 306 -6 1841 131 60 0 chr20 55993962 55994245 -16159637 + AluSg SINE Alu 1 300 -10 231 268 9 54 chr20 55994283 55994395 -16159487 - MER113 DNA MER1_type? -106 415 309 262 61 41 0 chr20 55995957 55996006 -16157876 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 331 250 38 0 chr20 55996006 55996086 -16157796 + L2 LINE L2 3227 3309 -4 2980 180 3 45 chr20 55996087 55996582 -16157300 + L1MB3 LINE L1 5293 5756 -427 4114 170 24 10 chr20 55996582 55997288 -16156594 + LTR62 LTR ERVK 2 717 -2 2980 180 3 45 chr20 55997288 55997432 -16156450 + L1MB3 LINE L1 5756 5905 -278 2136 141 21 9 chr20 55997434 55997774 -16156108 - MER47A DNA MER2_type -1 365 22 1280 112 40 65 chr20 55997783 55998010 -16155872 + L1MB3 LINE L1 5911 6131 -52 2264 83 0 0 chr20 55998010 55998300 -16155582 + AluSg SINE Alu 1 290 -20 1280 112 40 65 chr20 55998300 55998349 -16155533 + L1MB3 LINE L1 6131 6180 -3 22 35 0 0 chr20 55998349 55998378 -16155504 + AT_rich Low_complexity Low_complexity 1 29 0 1509 238 97 54 chr20 55998731 55999008 -16154874 - MLT1K LTR MaLR -10 578 314 1750 109 15 15 chr20 55999008 55999282 -16154600 + AluSq SINE Alu 40 313 0 1509 238 97 54 chr20 55999282 55999543 -16154339 - MLT1K LTR MaLR -274 314 17 988 249 88 35 chr20 56000329 56000671 -16153211 + MLT1J LTR MaLR 32 391 -120 458 247 171 61 chr20 56000893 56001221 -16152661 - L2 LINE L2 -40 3273 2910 511 308 44 22 chr20 56001267 56001483 -16152399 - MIR SINE MIR -24 238 20 534 117 0 0 chr20 56104068 56104145 -16049737 + MADE1 DNA Mariner 3 79 -1 1132 271 33 5 chr20 56104647 56105126 -16048756 + L2 LINE L2 2590 3080 -233 2022 131 0 55 chr20 56106838 56106970 -16046912 + AluJo SINE Alu 1 139 -173 1583 60 32 5 chr20 56106970 56107187 -16046695 + L1PA6 LINE L1 5932 6154 0 2022 131 0 55 chr20 56107187 56107383 -16046499 + AluJo SINE Alu 139 311 -1 484 250 0 9 chr20 56107390 56107502 -16046380 + MIR SINE MIR 48 158 -104 588 309 106 37 chr20 56107704 56108054 -16045828 + L2 LINE L2 2423 2796 -518 403 302 127 24 chr20 56108051 56108303 -16045579 + L2 LINE L2 3034 3311 -2 * 2127 133 64 11 chr20 56108881 56109256 -16044626 - MER44D DNA MER2_type -10 595 329 309 250 186 16 chr20 56109468 56109592 -16044290 - L1MC4 LINE L1 -1 8041 7897 1030 273 79 14 chr20 56109955 56110322 -16043560 + L2 LINE L2 2920 3310 -3 1900 200 112 18 chr20 56110331 56110841 -16043041 - MER74A LTR ERVL 0 558 1 475 234 46 8 chr20 56110913 56111034 -16042848 + MLT1K LTR MaLR 135 247 -341 378 225 0 0 chr20 56111159 56111239 -16042643 - MER53 DNA DNA -5 184 105 356 197 79 70 chr20 56111388 56111516 -16042366 + MLT1L LTR MaLR 236 462 -148 5883 117 244 26 chr20 56111529 56112804 -16041078 + pTR5 LTR ERV1 743 2295 -143 512 250 88 0 chr20 56112900 56113048 -16040834 + MER5B DNA MER1_type 1 161 -17 371 243 220 6 chr20 56113051 56113200 -16040682 + MER5A DNA MER1_type 4 189 0 1486 150 127 8 chr20 56114639 56114899 -16038983 - AluSg1 SINE Alu -18 291 1 229 318 0 0 chr20 56115197 56115260 -16038622 - MIR SINE MIR -75 133 71 2240 116 10 0 chr20 56115323 56115617 -16038265 - AluSq SINE Alu -16 297 1 587 161 168 0 chr20 56115771 56115926 -16037956 - MER53 DNA DNA -2 187 7 652 164 0 24 chr20 56116268 56116433 -16037449 + (TG)n Simple_repeat Simple_repeat 2 162 0 339 25 0 0 chr20 56116455 56116495 -16037387 + (TG)n Simple_repeat Simple_repeat 2 41 0 185 283 85 47 chr20 56118060 56118166 -16035716 - MIR SINE MIR -121 141 32 331 292 69 7 chr20 56118429 56118573 -16035309 + MIR SINE MIR 100 252 -10 452 154 0 0 chr20 56119293 56119371 -16034511 - MER53 DNA DNA 0 189 112 2099 107 7 4 chr20 56119379 56119660 -16034222 + AluSx SINE Alu 1 282 -30 964 203 28 19 chr20 56119734 56119946 -16033936 - MER20 DNA MER1_type 0 219 6 244 250 103 0 chr20 56119991 56120059 -16033823 + MLT1L LTR MaLR 1 75 -540 319 221 141 88 chr20 56120459 56120708 -16033174 + MLT1L LTR MaLR 198 459 -156 1071 184 76 21 chr20 56120832 56121277 -16032605 - MLT1D LTR MaLR 0 505 1 330 222 0 0 chr20 56121283 56121346 -16032536 - MLT1D LTR MaLR -442 63 1 747 341 128 21 chr20 56121389 56121919 -16031963 + L2 LINE L2 2143 2729 -585 270 100 25 0 chr20 56122380 56122420 -16031462 - LTR16C LTR ERVL -3 488 448 2180 165 65 39 chr20 56122421 56122463 -16031419 - L1MB5 LINE L1 0 6174 6135 2223 113 13 0 chr20 56122463 56122765 -16031117 - AluSx SINE Alu -6 306 1 2180 165 65 39 chr20 56122765 56123213 -16030669 - L1MB5 LINE L1 -39 6135 5671 578 293 98 31 chr20 56123214 56123470 -16030412 - LTR16C LTR ERVL -31 460 188 411 132 0 0 chr20 56123521 56123589 -16030293 + (TG)n Simple_repeat Simple_repeat 1 68 0 555 236 123 30 chr20 56123771 56123974 -16029908 - MER113 DNA MER1_type? -80 441 220 23 0 0 0 chr20 56124019 56124042 -16029840 + AT_rich Low_complexity Low_complexity 1 23 0 350 239 0 6 chr20 56124283 56124450 -16029432 + (TG)n Simple_repeat Simple_repeat 1 166 0 195 281 18 0 chr20 56124685 56124742 -16029140 - L2 LINE L2 -5 3308 3251 383 250 129 7 chr20 56124969 56125109 -16028773 - MIR SINE MIR -98 164 8 197 343 0 0 chr20 56125123 56125193 -16028689 + MIR SINE MIR 76 145 -117 897 243 53 127 chr20 56125775 56126358 -16027524 - L2 LINE L2 -1 3312 2787 465 234 27 0 chr20 56126358 56126469 -16027413 + MER81 DNA DNA 1 114 0 897 243 53 127 chr20 56126469 56126702 -16027180 - L2 LINE L2 -526 2787 2538 2443 167 29 27 chr20 56126725 56127210 -16026672 + MER66B LTR ERV1 1 486 0 212 359 86 43 chr20 56127879 56128113 -16025769 - L2 LINE L2 -1 3271 3028 449 270 70 33 chr20 56128114 56128355 -16025527 - MLT1L LTR MaLR 0 615 366 1042 218 10 10 chr20 56128643 56128849 -16025033 + MLT1A1 LTR MaLR 159 364 -1 1985 143 106 3 chr20 56128851 56129237 -16024645 - MSTB1 LTR MaLR 0 432 7 213 318 75 28 chr20 56129612 56129719 -16024163 + MIR SINE MIR 129 240 -22 424 270 63 0 chr20 56130436 56130562 -16023320 - L2 LINE L2 -13 3300 3167 237 258 94 25 chr20 56130820 56130979 -16022903 - L2 LINE L2 -552 2762 2593 978 257 17 17 chr20 56131380 56131621 -16022261 - MIR SINE MIR -1 261 21 2105 146 8 27 chr20 56133328 56133699 -16020183 + THE1B LTR MaLR 1 364 0 285 200 125 0 chr20 56133732 56133812 -16020070 + L2 LINE L2 3183 3272 -41 438 156 115 0 chr20 56133841 56133937 -16019945 + L2 LINE L2 3207 3313 0 294 226 214 0 chr20 56134822 56134906 -16018976 + MLT1J LTR MaLR 74 175 -336 802 141 29 158 chr20 56135014 56135182 -16018700 + LTR39 LTR ERV1 1 130 -653 2348 146 57 0 chr20 56135182 56135587 -16018295 - MSTA LTR MaLR 0 428 1 802 141 29 158 chr20 56135587 56135654 -16018228 + LTR39 LTR ERV1 130 205 -578 1975 162 63 28 chr20 56135654 56136189 -16017693 - MLT2A2 LTR ERVL 0 554 1 2755 192 15 27 chr20 56136190 56136778 -16017104 + LTR39 LTR ERV1 203 783 0 239 320 16 24 chr20 56136813 56136938 -16016944 - MLT1K LTR MaLR -2 586 463 1969 185 38 7 chr20 56137480 56137897 -16015985 + LTR23 LTR ERV1 8 437 0 1467 140 9 22 chr20 56137928 56138157 -16015725 - AluJo SINE Alu -3 309 84 4187 144 97 31 chr20 56138157 56139003 -16014879 + MER4D LTR ERV1 2 903 0 406 208 76 0 chr20 56139003 56139101 -16014781 - AluJo SINE Alu -214 88 1 281 300 148 24 chr20 56139386 56139596 -16014286 - MIR SINE MIR -12 250 15 748 249 51 28 chr20 56139671 56139888 -16013994 - MER58A DNA MER1_type -2 222 1 661 262 107 24 chr20 56139888 56140178 -16013704 + MER113 DNA MER1_type? 86 399 -122 1858 196 79 13 chr20 56140447 56140689 -16013193 + MER66B LTR ERV1 1 226 -260 2173 134 3 0 chr20 56140689 56140996 -16012886 + AluSx SINE Alu 1 308 -4 1858 196 79 13 chr20 56140996 56141207 -16012675 + MER66B LTR ERV1 226 484 -2 606 226 89 32 chr20 56142522 56142666 -16011216 - L2 LINE L2 0 3313 3154 512 219 53 30 chr20 56142666 56142835 -16011047 + MER104 DNA MER2_type 4 176 -4 606 226 89 32 chr20 56142835 56142880 -16011002 - L2 LINE L2 -159 3154 3113 1781 178 20 14 chr20 56142952 56143272 -16010610 - L1PB4 LINE L1 -4 6152 5828 2354 105 0 3 chr20 56143272 56143578 -16010304 - AluSg SINE Alu -5 305 1 1781 178 20 14 chr20 56143578 56143612 -16010270 - L1PB4 LINE L1 -328 5828 5796 333 184 28 0 chr20 56143708 56143797 -16010085 - L1PB4 LINE L1 -493 5807 5710 371 300 107 23 chr20 56143888 56144054 -16009828 - MER102b DNA MER1_type -1136 292 95 1865 138 14 34 chr20 56144054 56144351 -16009531 - AluJb SINE Alu -21 291 1 371 300 107 23 chr20 56144351 56144447 -16009435 - MER102b DNA MER1_type -1333 95 8 1209 227 124 41 chr20 56144709 56145168 -16008714 - MLT1J LTR MaLR 0 511 15 559 124 0 22 chr20 56145359 56145448 -16008434 - AluJo SINE Alu -176 136 50 398 226 83 54 chr20 56145542 56145746 -16008136 + L1 LINE L1 2909 3118 -3028 339 327 18 9 chr20 56145802 56145915 -16007967 + L1 LINE L1 3131 3244 -2902 287 299 59 68 chr20 56145915 56146136 -16007746 - L1MC4a LINE L1 -1907 5901 5683 21 0 0 0 chr20 56146463 56146484 -16007398 + AT_rich Low_complexity Low_complexity 1 21 0 478 333 79 20 chr20 56146492 56146795 -16007087 + LTR16A LTR ERVL 125 445 -5 325 322 83 3 chr20 56147443 56147757 -16006125 + L2 LINE L2 2812 3150 -163 298 343 87 14 chr20 56147775 56148064 -16005818 - LTR16C LTR ERVL -1 490 181 313 316 52 0 chr20 56148220 56148356 -16005526 + L2 LINE L2 3169 3311 -2 1104 280 104 19 chr20 56149108 56149647 -16004235 - L1MC4 LINE L1 -575 7467 6883 243 304 67 22 chr20 56149637 56149772 -16004110 + L1MC4 LINE L1 7534 7674 -368 * 511 260 17 40 chr20 56149794 56149971 -16003911 + L1MC4 LINE L1 7732 7904 -138 228 300 0 0 chr20 56149971 56150031 -16003851 + (CA)n Simple_repeat Simple_repeat 1 60 0 300 279 47 0 chr20 56150085 56150171 -16003711 + L1MC5 LINE L1 7837 7926 -35 896 175 81 126 chr20 56150287 56150596 -16003286 - MER51C LTR ERV1 0 640 346 291 241 23 23 chr20 56151924 56152011 -16001871 - L2 LINE L2 -2 3270 3184 324 238 119 32 chr20 56153099 56153225 -16000657 + MER63A DNA MER1_type 74 210 0 451 327 126 5 chr20 56153791 56154014 -15999868 + MIR SINE MIR 8 257 -5 401 299 30 63 chr20 56154234 56154506 -15999376 - L2 LINE L2 -263 3050 2783 957 157 0 7 chr20 56155123 56155270 -15998612 - AluSq/x SINE Alu -167 146 1 203 77 77 46 chr20 56155682 56155747 -15998135 + (TTATA)n Simple_repeat Simple_repeat 2 68 0 2336 71 0 7 chr20 56155757 56156063 -15997819 - AluSc SINE Alu 0 304 1 2179 131 0 0 chr20 56156284 56156581 -15997301 + AluSx SINE Alu 5 301 -11 536 266 46 46 chr20 56156880 56157088 -15996794 - L2 LINE L2 0 3313 3103 1726 179 9 46 chr20 56157088 56157412 -15996470 + AluJb SINE Alu 1 312 0 536 266 46 46 chr20 56157412 56157440 -15996442 - L2 LINE L2 -209 3104 3077 256 265 220 30 chr20 56158183 56158315 -15995567 - L2 LINE L2 -2 3311 3155 311 154 0 0 chr20 56158319 56158371 -15995511 - MADE1 DNA Mariner 0 80 29 315 106 0 0 chr20 56158401 56158448 -15995434 - MADE1 DNA Mariner -33 47 1 312 287 56 36 chr20 56158582 56158777 -15995105 - L2 LINE L2 -238 3034 2836 * 383 303 87 17 chr20 56158773 56159014 -15994868 - L2 LINE L2 -338 2976 2719 242 255 10 61 chr20 56170536 56170634 -15983248 - MLT2B1 LTR ERVL -130 390 298 255 210 0 65 chr20 56171205 56171267 -15982615 - MLT2D LTR ERVL -128 286 229 234 169 62 31 chr20 56171311 56171376 -15982506 - MLT2D LTR ERVL -128 286 220 475 280 118 29 chr20 56173106 56173457 -15980425 - MLT1J LTR MaLR -27 423 51 363 326 0 0 chr20 56173539 56173634 -15980248 + MER81 DNA DNA 1 95 -19 * 528 237 0 0 chr20 56173629 56173726 -15980156 + MER81 DNA DNA 11 107 -7 236 316 0 0 chr20 56173727 56173806 -15980076 + L2 LINE L2 2922 3000 -313 361 234 181 12 chr20 56174225 56174396 -15979486 + L1ME LINE L1 5551 5750 -371 499 236 107 111 chr20 56174424 56174572 -15979310 + MLT1J LTR MaLR 36 183 -328 2650 117 44 5 chr20 56174572 56174982 -15978900 + MSTB LTR MaLR 1 426 0 499 236 107 111 chr20 56174982 56175166 -15978716 + MLT1J LTR MaLR 183 408 -103 1973 153 0 3 chr20 56175166 56175474 -15978408 - AluSx SINE Alu -5 307 1 499 236 107 111 chr20 56175474 56175530 -15978352 + MLT1J LTR MaLR 408 463 -48 1967 143 7 0 chr20 56175671 56175972 -15977910 - AluSx SINE Alu -9 303 1 466 301 62 55 chr20 56177178 56177470 -15976412 - L2 LINE L2 -9 3304 3011 300 120 20 0 chr20 56177540 56177590 -15976292 + U7 snRNA snRNA 1 51 -12 303 212 91 20 chr20 56177740 56177839 -15976043 + Charlie8 DNA MER1_type 77 182 -2235 252 100 0 0 chr20 56178616 56178656 -15975226 + MIR SINE MIR 111 150 -112 388 250 36 9 chr20 56178722 56178834 -15975048 - MIR SINE MIR -99 163 49 810 263 15 42 chr20 56179535 56179794 -15974088 - MER112 DNA MER1_type -4 252 1 231 264 0 0 chr20 56180317 56180370 -15973512 + (CA)n Simple_repeat Simple_repeat 2 54 0 312 289 0 0 chr20 56180387 56180567 -15973315 + (CA)n Simple_repeat Simple_repeat 1 180 0 1131 193 52 0 chr20 56183722 56183934 -15969948 - MIR SINE MIR -27 235 13 543 278 91 17 chr20 56184176 56184352 -15969530 - L2 LINE L2 -17 3296 3108 759 239 38 5 chr20 56184386 56184570 -15969312 - MLT1D LTR MaLR 0 505 316 1019 102 0 32 chr20 56184581 56184767 -15969115 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 180 0 0 0 chr20 56184770 56184790 -15969092 + (TC)n Simple_repeat Simple_repeat 1 20 0 1635 166 4 0 chr20 56184810 56185088 -15968794 - AluSx SINE Alu -3 309 31 1288 209 72 0 chr20 56185108 56185386 -15968496 - MLT1D LTR MaLR -200 305 8 1046 271 72 6 chr20 56185390 56185878 -15968004 - L2 LINE L2 -224 3089 2572 604 321 38 19 chr20 56185878 56186143 -15967739 + LTR16A LTR ERVL 16 285 -165 843 300 98 31 chr20 56186488 56186945 -15966937 - L2 LINE L2 -1 3312 2825 1028 180 45 18 chr20 56186999 56187221 -15966661 + AluJb SINE Alu 84 311 -1 1954 66 122 0 chr20 56188952 56189223 -15964659 + AluY SINE Alu 1 304 -7 376 127 13 13 chr20 56189647 56189726 -15964156 + CT-rich Low_complexity Low_complexity 3 81 0 756 201 17 6 chr20 56189737 56189911 -15963971 + MER96B DNA MER1_type? 241 416 -1 2437 55 0 16 chr20 56189977 56190288 -15963594 - AluY SINE Alu -5 306 1 253 310 106 53 chr20 56190864 56191203 -15962679 - L2 LINE L2 -94 3219 2863 199 281 67 0 chr20 56191232 56191321 -15962561 - L2 LINE L2 -324 2948 2854 564 336 98 18 chr20 56191927 56192439 -15961443 - L1ME4a LINE L1 0 6121 5569 593 229 39 62 chr20 56194626 56194977 -15958905 - MLT2D LTR ERVL -11 514 241 243 253 18 68 chr20 56195065 56195177 -15958705 - MLT2D LTR ERVL -128 286 225 258 234 26 71 chr20 56195333 56195480 -15958402 - MLT2D LTR ERVL -107 413 225 241 176 0 0 chr20 56200947 56200998 -15952884 - Alu SINE Alu -4 298 248 450 306 127 54 chr20 56201077 56201630 -15952252 - L1ME3A LINE L1 -282 5888 5296 2324 72 7 3 chr20 56201633 56201939 -15951943 - AluY SINE Alu -4 307 1 1982 125 3 13 chr20 56201951 56202262 -15951620 - AluSx SINE Alu -4 308 1 339 288 88 18 chr20 56202374 56202544 -15951338 - L2 LINE L2 -431 2883 2702 194 271 73 31 chr20 56203140 56203236 -15950646 + L2 LINE L2 3149 3248 -24 943 287 139 12 chr20 56203747 56204165 -15949717 - MLT1J LTR MaLR -2 509 39 394 316 0 0 chr20 56204216 56204311 -15949571 + MER81 DNA DNA 1 95 -19 * 515 264 9 0 chr20 56204302 56204408 -15949474 + MER81 DNA DNA 7 113 -1 387 336 0 0 chr20 56204408 56204539 -15949343 + L2 LINE L2 2869 2999 -314 478 251 85 7 chr20 56204957 56205126 -15948756 + L1ME4a LINE L1 5550 5701 -420 595 305 75 30 chr20 56205161 56205564 -15948318 + MLT1J LTR MaLR 39 505 -6 341 294 91 91 chr20 56205571 56205786 -15948096 + L1ME4a LINE L1 5754 5971 -150 879 118 0 0 chr20 56205786 56205930 -15947952 + (TCCA)n Simple_repeat Simple_repeat 1 144 0 341 294 91 91 chr20 56205930 56206023 -15947859 + L1ME4a LINE L1 5970 6062 -59 2093 262 72 6 chr20 56206027 56206565 -15947317 + MLT1E LTR MaLR 14 587 -6 2370 67 0 3 chr20 56206951 56207251 -15946631 + AluY SINE Alu 1 299 -12 193 369 29 0 chr20 56207373 56207476 -15946406 + L2 LINE L2 2600 2705 -609 277 317 34 96 chr20 56207690 56207983 -15945899 + L2 LINE L2 2994 3268 -4 610 317 113 28 chr20 56208515 56209133 -15944749 - L2 LINE L2 -8 3305 2613 2075 124 3 0 chr20 56209483 56209781 -15944101 + AluSq SINE Alu 1 299 -14 1227 246 77 27 chr20 56209792 56209969 -15943913 - MER113 DNA MER1_type? -38 483 316 2867 185 72 50 chr20 56209969 56210645 -15943237 + LTR8 LTR ERV1 1 691 0 1227 246 77 27 chr20 56210645 56210906 -15942976 - MER113 DNA MER1_type? -205 316 23 646 226 167 31 chr20 56210906 56211261 -15942621 + L2 LINE L2 2713 3098 -215 604 261 29 57 chr20 56211885 56212130 -15941752 - MER112 DNA MER1_type -10 250 13 199 330 50 34 chr20 56212386 56212565 -15941317 + L2 LINE L2 3108 3289 -24 365 290 184 14 chr20 56212720 56213013 -15940869 + LTR16C LTR ERVL 1 343 -148 604 217 16 0 chr20 56213127 56213256 -15940626 + LTR16C LTR ERVL 357 487 -4 185 243 14 0 chr20 56213827 56213897 -15939985 + (CA)n Simple_repeat Simple_repeat 2 72 0 372 273 0 0 chr20 56213914 56214079 -15939803 + (CA)n Simple_repeat Simple_repeat 2 166 0 221 264 0 7 chr20 56214147 56214302 -15939580 + (CA)n Simple_repeat Simple_repeat 1 154 0 252 59 0 0 chr20 56214576 56214610 -15939272 + (TG)n Simple_repeat Simple_repeat 2 35 0 443 215 122 0 chr20 56217964 56218071 -15935811 - MIR SINE MIR -73 189 70 391 330 121 21 chr20 56218231 56218561 -15935321 - L2 LINE L2 -6 3307 2945 407 279 180 17 chr20 56218702 56218874 -15935008 + MIR SINE MIR 14 213 -49 2031 108 88 51 chr20 56219219 56219570 -15934312 + THE1B LTR MaLR 1 364 0 347 304 9 18 chr20 56219608 56219720 -15934162 + MIR SINE MIR 15 125 -137 309 245 118 0 chr20 56220168 56220270 -15933612 + L2 LINE L2 3194 3307 -6 2374 58 6 13 chr20 56220487 56220800 -15933082 + AluY SINE Alu 1 311 0 241 366 20 46 chr20 56220999 56221152 -15932730 + MIR SINE MIR 64 212 -50 358 311 31 51 chr20 56221293 56221419 -15932463 + MER112 DNA MER1_type 3 135 -125 1001 48 24 35 chr20 56221419 56221681 -15932201 + (CATCC)n Simple_repeat Simple_repeat 1 259 0 358 311 31 51 chr20 56221681 56221799 -15932083 + MER112 DNA MER1_type 135 254 -6 238 340 58 0 chr20 56221871 56221974 -15931908 + L2 LINE L2 3157 3265 -7 414 310 13 39 chr20 56222249 56222416 -15931466 + MER20B DNA MER1_type 54 219 0 343 127 18 0 chr20 56222919 56222974 -15930908 + MER81 DNA DNA 58 113 -1 2101 107 16 10 chr20 56223062 56223370 -15930512 + AluSx SINE Alu 1 310 -2 365 318 50 11 chr20 56223390 56223569 -15930313 - L2 LINE L2 -555 2759 2574 628 282 55 32 chr20 56223569 56223898 -15929984 + LTR16A LTR ERVL 1 344 -106 740 255 130 43 chr20 56224039 56224361 -15929521 - L1ME3 LINE L1 -7 6155 5806 389 223 114 99 chr20 56224361 56224563 -15929319 - L1MDa LINE L1 -3895 2487 2283 987 264 58 56 chr20 56224569 56224968 -15928914 - L1MDa LINE L1 -4347 2216 1814 2194 97 3 25 chr20 56224968 56225288 -15928594 - AluSp SINE Alu 0 313 1 987 264 58 56 chr20 56225288 56225370 -15928512 - L1MDa LINE L1 -4749 1814 1734 441 254 22 29 chr20 56225370 56225508 -15928374 - LTR45 LTR ERV1 0 525 389 1823 157 0 10 chr20 56225845 56226150 -15927732 - AluSx SINE Alu -10 302 1 715 306 93 32 chr20 56226350 56226534 -15927348 - L1MDa LINE L1 -4820 1564 1393 1804 171 7 0 chr20 56226534 56226844 -15927038 - AluSx SINE Alu 0 312 1 715 306 93 32 chr20 56226844 56227195 -15926687 - L1MDa LINE L1 -4991 1393 996 662 221 8 23 chr20 56227203 56227354 -15926528 - FLAM_A SINE Alu 0 133 4 677 267 34 0 chr20 56227430 56227606 -15926276 + MIR SINE MIR 14 195 -67 245 265 88 10 chr20 56228026 56228128 -15925754 - L2 LINE L2 -2 3311 3202 225 297 101 29 chr20 56228215 56228353 -15925529 + L2 LINE L2 3165 3312 -1 745 268 5 41 chr20 56228496 56228567 -15925315 + MER20 DNA MER1_type 8 80 -139 342 0 0 0 chr20 56228567 56228605 -15925277 + (TG)n Simple_repeat Simple_repeat 1 38 0 745 268 5 41 chr20 56228605 56228753 -15925129 + MER20 DNA MER1_type 80 219 0 295 246 0 15 chr20 56228880 56228945 -15924937 - L2 LINE L2 0 3313 3250 2218 170 6 0 chr20 56228963 56229321 -15924561 + MLT1A1 LTR MaLR 4 363 -2 183 306 28 28 chr20 56229323 56229395 -15924487 - L2 LINE L2 -54 3259 3188 2491 115 0 3 chr20 56230154 56230492 -15923390 - MER1B DNA MER1_type 0 337 1 755 272 165 72 chr20 56230545 56230984 -15922898 + MLT1K LTR MaLR 1 496 -92 1869 122 50 4 chr20 56230984 56231262 -15922620 - AluSg SINE Alu -19 291 1 755 272 165 72 chr20 56231262 56231337 -15922545 + MLT1K LTR MaLR 496 563 -25 196 338 81 0 chr20 56231564 56231700 -15922182 - L2 LINE L2 -189 3083 2937 216 0 0 0 chr20 56232469 56232493 -15921389 + (TTAA)n Simple_repeat Simple_repeat 3 26 0 1967 119 3 7 chr20 56232493 56232781 -15921101 - AluSx SINE Alu -23 289 1 875 200 109 106 chr20 56232910 56233250 -15920632 + MLT1D LTR MaLR 16 356 -149 1831 167 0 3 chr20 56233364 56233663 -15920219 + AluJo SINE Alu 1 298 -14 1434 202 0 28 chr20 56235068 56235385 -15918497 + AluJo SINE Alu 1 308 -4 292 126 264 46 chr20 56235543 56235630 -15918252 + L1MC2 LINE L1 6239 6344 0 305 314 0 9 chr20 56236122 56236227 -15917655 - MLT1L LTR MaLR -102 513 410 227 333 0 0 chr20 56236728 56236785 -15917097 + MIR SINE MIR 206 262 0 * 323 279 8 57 chr20 56236755 56236877 -15917005 + L2 LINE L2 3198 3313 0 2102 125 0 0 chr20 56236915 56237212 -15916670 + AluSq SINE Alu 1 297 -16 3681 168 100 40 chr20 56237538 56238389 -15915493 - MER4D LTR ERV1 -1 902 1 3665 64 60 24 chr20 56238677 56239282 -15914600 + MER41A LTR ERV1 1 554 0 464 277 69 0 chr20 56239376 56239535 -15914347 + LTR16C LTR ERVL 70 239 -252 457 237 76 0 chr20 56240320 56240438 -15913444 + LTR16C LTR ERVL 350 476 -15 230 306 49 56 chr20 56240460 56240604 -15913278 - MLT1K LTR MaLR -12 576 434 342 330 0 0 chr20 56240714 56240814 -15913068 - MLT1K LTR MaLR -304 284 185 736 201 8 8 chr20 56240851 56240985 -15912897 - FRAM SINE Alu -23 153 20 667 259 22 58 chr20 56293935 56294209 -15859673 - MLT1J LTR MaLR -9 502 239 222 296 114 11 chr20 56294368 56294456 -15859426 - MIR SINE MIR -2 260 164 1497 236 134 9 chr20 56294456 56294790 -15859092 + MLT1D LTR MaLR 3 407 -98 3616 118 11 4 chr20 56294790 56295313 -15858569 + MER1A DNA MER1_type 1 527 0 1497 236 134 9 chr20 56295313 56295418 -15858464 + MLT1D LTR MaLR 406 497 -8 580 233 16 45 chr20 56295440 56295604 -15858278 - MIR SINE MIR -51 157 2 538 211 151 77 chr20 56295693 56295992 -15857890 - L1MC5 LINE L1 -32 7929 7609 1226 179 44 37 chr20 56296055 56296352 -15857530 - MER33 DNA MER1_type -23 301 3 2446 97 0 0 chr20 56296390 56296700 -15857182 + AluSx SINE Alu 1 310 -2 319 218 109 0 chr20 56296932 56297033 -15856849 - MER112 DNA MER1_type -12 248 137 750 271 168 25 chr20 56298153 56298445 -15855437 - L2 LINE L2 -1 3312 3063 2222 106 0 3 chr20 56298445 56298854 -15855028 - AluSg SINE Alu 0 408 1 750 271 168 25 chr20 56298854 56299346 -15854536 - L2 LINE L2 -250 3063 2411 1649 204 3 3 chr20 56299491 56299785 -15854097 + AluJo SINE Alu 1 294 -18 447 327 65 23 chr20 56299827 56300044 -15853838 - MIR SINE MIR -6 256 31 324 345 94 21 chr20 56300119 56300310 -15853572 + HAL1 LINE L1 2274 2478 -29 746 194 63 118 chr20 56300499 56300557 -15853325 - MER58A DNA MER1_type -2196 224 164 1933 148 7 10 chr20 56300557 56300848 -15853034 + AluSx SINE Alu 1 290 -22 746 194 63 118 chr20 56300848 56301026 -15852856 - MER58A DNA MER1_type -2256 164 1 427 229 98 89 chr20 56301856 56302070 -15851812 - MLT1J2 LTR MaLR 0 450 231 264 240 115 10 chr20 56302117 56302213 -15851669 - MLT1J2 LTR MaLR -344 106 1 * 759 260 113 35 chr20 56302213 56302646 -15851236 - MLT1J LTR MaLR -41 470 4 538 262 48 5 chr20 56302979 56303166 -15850716 - MER20B DNA MER1_type 0 783 589 351 230 234 40 chr20 56303420 56303642 -15850240 - MER20B DNA MER1_type -493 290 26 1771 147 52 33 chr20 56303672 56303978 -15849904 + AluJo SINE Alu 1 312 0 198 0 0 0 chr20 56304639 56304661 -15849221 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 2908 82 5 23 chr20 56304661 56305090 -15848792 - L1PA13 LINE L1 -23 6140 5720 418 95 25 3 chr20 56305087 56305182 -15848700 + L1M LINE L1 5289 5392 -793 * 927 282 80 19 chr20 56305482 56305855 -15848027 + L1ME1 LINE L1 5720 6058 -108 2105 144 0 0 chr20 56305855 56306154 -15847728 + AluSx SINE Alu 1 299 -13 927 282 80 19 chr20 56306154 56306202 -15847680 + L1ME1 LINE L1 6058 6102 -64 372 256 67 0 chr20 56306458 56306548 -15847334 + MER81 DNA DNA 18 113 -1 334 259 148 12 chr20 56306562 56306724 -15847158 + L2 LINE L2 2997 3180 -133 1782 186 7 13 chr20 56307096 56307403 -15846479 + AluJb SINE Alu 1 305 -7 596 272 163 33 chr20 56308084 56308514 -15845368 - L2 LINE L2 -1 3312 2827 432 269 57 21 chr20 56309105 56309246 -15844636 - MIR SINE MIR -1 261 116 243 312 28 28 chr20 56309444 56309553 -15844329 + MIR SINE MIR 26 134 -128 1006 263 36 8 chr20 56309609 56309860 -15844022 + MIR SINE MIR 5 262 0 543 309 101 11 chr20 56309983 56310171 -15843711 + MIR SINE MIR 58 262 0 272 279 177 32 chr20 56310234 56310392 -15843490 + L2 LINE L2 2905 3085 -228 618 116 265 54 chr20 56310438 56310486 -15843396 - LTR16C LTR ERVL -8 483 446 353 79 270 0 chr20 56310486 56310549 -15843333 + MADE1 DNA Mariner 1 80 0 618 116 265 54 chr20 56310549 56310647 -15843235 - LTR16C LTR ERVL -45 446 306 301 247 113 0 chr20 56310777 56310874 -15843008 + L2 LINE L2 3205 3312 -1 207 0 0 0 chr20 56310946 56310969 -15842913 + (GGAA)n Simple_repeat Simple_repeat 2 24 0 557 209 0 7 chr20 56311007 56311146 -15842736 + GA-rich Low_complexity Low_complexity 2 139 0 249 159 0 0 chr20 56311175 56311219 -15842663 + GA-rich Low_complexity Low_complexity 3 46 0 1146 194 152 77 chr20 56311271 56311725 -15842157 - MER41B LTR ERV1 -34 601 114 189 0 0 0 chr20 56311924 56311945 -15841937 + (T)n Simple_repeat Simple_repeat 1 21 0 1233 247 81 34 chr20 56311980 56312426 -15841456 + MLT2B1 LTR ERVL 6 472 -48 227 157 20 0 chr20 56312427 56312478 -15841404 + CT-rich Low_complexity Low_complexity 1 52 0 355 263 71 85 chr20 56312778 56313002 -15840880 + LTR67 LTR ERVL 335 555 -2 1217 273 55 35 chr20 56313164 56313917 -15839965 - L2 LINE L2 -4 3309 2467 601 292 16 16 chr20 56314031 56314216 -15839666 - MIR3 SINE MIR -3 205 21 263 288 13 97 chr20 56314430 56314656 -15839226 + L1ME LINE L1 5598 5804 -317 1573 248 128 38 chr20 56315555 56316213 -15837669 + MER20B DNA MER1_type 65 781 -2 331 312 137 44 chr20 56317756 56318144 -15835738 + L2 LINE L2 2851 3274 -39 210 348 43 37 chr20 56318191 56318355 -15835527 + MIR SINE MIR 50 214 -48 565 287 55 0 chr20 56318546 56318710 -15835172 - MIR SINE MIR -7 255 83 367 296 115 7 chr20 56319203 56319473 -15834409 + MLT1J LTR MaLR 87 385 -126 523 211 93 6 chr20 56320564 56320725 -15833157 + L3 LINE CR1 1339 1513 -64 205 292 97 0 chr20 56320825 56320897 -15832985 + L2 LINE L2 3188 3266 -6 2345 119 0 0 chr20 56321137 56321449 -15832433 + AluSx SINE Alu 1 312 0 346 306 38 54 chr20 56321512 56321698 -15832184 - HAL1 LINE L1 -99 2408 2226 441 336 23 0 chr20 56322087 56322218 -15831664 + L2 LINE L2 3139 3272 0 240 232 58 0 chr20 56322262 56322331 -15831551 + MER116 DNA Mariner 8 80 0 273 237 72 46 chr20 56323507 56323659 -15830223 + LTR33 LTR ERVL 55 210 -311 361 296 22 0 chr20 56323716 56323851 -15830031 + LTR33 LTR ERVL 319 456 -65 250 185 0 0 chr20 56324154 56324208 -15829674 - MLT2D LTR ERVL -2 518 465 856 153 64 6 chr20 56324244 56324401 -15829481 - MLT2D LTR ERVL -48 366 201 239 154 0 0 chr20 56324787 56324826 -15829056 - MER52A LTR ERV1 -1716 39 1 * 2396 205 50 40 chr20 56324826 56325473 -15828409 + MER52C LTR ERV1 19 656 -622 259 308 44 33 chr20 56325695 56325877 -15828005 - MLT1J LTR MaLR -94 417 234 259 271 107 16 chr20 56326948 56327070 -15826812 - L1MC5 LINE L1 -77 7884 7752 361 296 24 40 chr20 56327076 56327326 -15826556 - L1MC5 LINE L1 -260 7701 7456 3509 95 16 2 chr20 56327588 56328094 -15825788 - LTR10D LTR ERV1 0 513 1 248 299 137 0 chr20 56328513 56328686 -15825196 - MIR SINE MIR -29 233 37 * 786 311 68 13 chr20 56328665 56329291 -15824591 + L2 LINE L2 2632 3294 -19 715 246 156 63 chr20 56329613 56330031 -15823851 - MLT1D LTR MaLR 0 467 5 188 232 125 36 chr20 56330614 56330726 -15823156 + L2 LINE L2 58 179 -3135 2132 78 53 9 chr20 56331267 56331588 -15822294 + LOR1a LTR ERV1 3 337 -160 227 275 14 0 chr20 56331627 56331696 -15822186 + T-rich Low_complexity Low_complexity 1 70 0 308 268 84 56 chr20 56331702 56331803 -15822079 + L1ME LINE L1 5677 5785 -336 1947 183 89 9 chr20 56331803 56332230 -15821652 + LOR1b LTR ERV1 1 461 0 308 268 84 56 chr20 56332230 56332270 -15821612 + L1ME LINE L1 5785 5822 -299 588 211 92 26 chr20 56332343 56332495 -15821387 - MLT2B1 LTR ERVL -30 490 329 657 167 0 43 chr20 56332543 56332729 -15821153 + CT-rich Low_complexity Low_complexity 1 178 0 263 91 0 23 chr20 56332729 56332773 -15821109 + (TTCC)n Simple_repeat Simple_repeat 4 46 0 1711 190 0 29 chr20 56332780 56333091 -15820791 - AluJo SINE Alu -10 302 1 1099 200 9 9 chr20 56333092 56333312 -15820570 - MLT2B1 LTR ERVL -300 220 1 481 272 154 6 chr20 56333391 56333553 -15820329 - MER5A DNA MER1_type 0 189 4 276 286 9 76 chr20 56333690 56333796 -15820086 - MIR SINE MIR -102 106 9 22 0 0 0 chr20 56334365 56334387 -15819495 + AT_rich Low_complexity Low_complexity 1 22 0 276 295 38 19 chr20 56335024 56335129 -15818753 + MIR3 SINE MIR 85 191 -17 382 243 68 34 chr20 56335550 56335698 -15818184 - MLT1K LTR MaLR -341 247 95 23 0 0 0 chr20 56336075 56336098 -15817784 + AT_rich Low_complexity Low_complexity 1 23 0 241 171 0 0 chr20 56336289 56336330 -15817552 - L2 LINE L2 -4 3309 3269 235 261 178 47 chr20 56336374 56336650 -15817232 - L2 LINE L2 -173 3140 2829 383 300 0 0 chr20 56336789 56336909 -15816973 + (TG)n Simple_repeat Simple_repeat 1 120 0 344 357 74 6 chr20 56336909 56337245 -15816637 - L1MC4a LINE L1 -1890 5918 5560 590 219 216 23 chr20 56337500 56337706 -15816176 - MIR SINE MIR -35 227 6 602 121 37 21 chr20 56337772 56338197 -15815685 + (CA)n Simple_repeat Simple_repeat 1 431 0 393 268 9 43 chr20 56339841 56340119 -15813763 + MER112 DNA MER1_type 3 233 -27 1491 261 92 10 chr20 56340666 56341504 -15812378 + L2 LINE L2 2384 3308 -5 531 306 80 46 chr20 56341552 56342101 -15811781 + L2 LINE L2 2727 3298 -15 219 204 0 0 chr20 56343810 56343859 -15810023 + (TATATG)n Simple_repeat Simple_repeat 4 52 0 1844 223 65 28 chr20 56343859 56343883 -15809999 - MLT2B1 LTR ERVL -40 480 458 195 42 0 0 chr20 56343883 56343907 -15809975 + (GA)n Simple_repeat Simple_repeat 1 24 0 1844 223 65 28 chr20 56343907 56344345 -15809537 - MLT2B1 LTR ERVL -62 458 1 310 247 171 0 chr20 56344349 56344507 -15809375 + MER112 DNA MER1_type 57 241 -19 2350 145 11 45 chr20 56344803 56344851 -15809031 - MSTB LTR MaLR 0 426 378 497 101 13 0 chr20 56344851 56344930 -15808952 + MADE1 DNA Mariner 1 80 0 2350 145 11 45 chr20 56344930 56345322 -15808560 - MSTB LTR MaLR -48 378 1 2911 190 59 11 chr20 56345520 56346131 -15807751 - MER82 DNA MER2_type 0 653 14 25 31 0 0 chr20 56346639 56346671 -15807211 + AT_rich Low_complexity Low_complexity 1 32 0 425 233 161 28 chr20 56346980 56347160 -15806722 + MIR SINE MIR 3 206 -56 1009 254 42 40 chr20 56347208 56347681 -15806201 + L2 LINE L2 2503 2976 -338 510 249 95 27 chr20 56347738 56347959 -15805923 + MER106A DNA MER1_type 1 236 0 348 219 133 0 chr20 56349869 56349974 -15803908 - MIR SINE MIR -60 202 84 447 282 33 37 chr20 56352293 56352538 -15801344 - HAL1 LINE L1 -293 2214 1971 721 252 16 52 chr20 56352554 56352804 -15801078 + MER112 DNA MER1_type 8 248 -12 625 222 102 41 chr20 56352929 56353221 -15800661 - LTR48 LTR ERV1 0 787 271 * 1002 241 136 30 chr20 56353215 56353547 -15800335 - LTR48 LTR ERV1 -420 367 1 504 211 11 0 chr20 56354046 56354136 -15799746 - MER20 DNA MER1_type -128 91 1 255 270 119 8 chr20 56356145 56356271 -15797611 - MIR3 SINE MIR -50 158 19 291 278 63 24 chr20 56356284 56356410 -15797472 - MIR SINE MIR -24 238 108 234 350 7 56 chr20 56356656 56356799 -15797083 - MIR SINE MIR -34 228 93 323 295 13 40 chr20 56356897 56357046 -15796836 + MLT1H LTR MaLR 31 175 -374 287 118 98 99 chr20 56357231 56357342 -15796540 + MLT1I LTR MaLR 285 549 0 274 286 0 0 chr20 56358066 56358143 -15795739 - MIR SINE MIR -108 154 78 261 250 15 0 chr20 56358453 56358521 -15795361 + (CTCA)n Simple_repeat Simple_repeat 4 72 0 694 274 26 52 chr20 56359316 56359626 -15794256 + MLT1K LTR MaLR 286 587 -1 2211 104 10 0 chr20 56359815 56360104 -15793778 - AluSc SINE Alu -17 292 1 1936 148 3 0 chr20 56360248 56360563 -15793319 + AluJb SINE Alu 1 316 0 2402 90 3 3 chr20 56361045 56361356 -15792526 + AluY SINE Alu 1 311 0 1282 161 0 10 chr20 56361562 56361761 -15792121 + AluJo SINE Alu 92 288 -24 215 31 31 0 chr20 56361851 56361883 -15791999 + (CAAAA)n Simple_repeat Simple_repeat 4 36 0 319 303 9 0 chr20 56361888 56361997 -15791885 + L1ME4a LINE L1 5748 5857 -264 1401 95 85 9 chr20 56362003 56362214 -15791668 + AluSp SINE Alu 84 310 -3 2630 58 0 6 chr20 56362328 56362641 -15791241 - AluY SINE Alu 0 311 1 483 244 226 33 chr20 56363435 56363519 -15790363 - L2 LINE L2 -12 3301 3235 239 0 32 0 chr20 56363519 56363550 -15790332 + (CCCCCG)n Simple_repeat Simple_repeat 3 34 0 483 244 226 33 chr20 56363550 56363863 -15790019 - L2 LINE L2 -78 3235 2827 470 274 46 0 chr20 56363942 56364117 -15789765 + MER5A DNA MER1_type 5 187 -2 281 272 102 7 chr20 56364310 56364457 -15789425 + LTR16C LTR ERVL 155 315 -176 544 261 34 23 chr20 56365500 56365676 -15788206 + MER5B DNA MER1_type 1 178 0 496 297 0 7 chr20 56365700 56365845 -15788037 - MIR3 SINE MIR 0 208 65 347 113 0 0 chr20 56366467 56366520 -15787362 - MLT1L LTR MaLR -6 609 557 508 248 176 7 chr20 56366531 56366684 -15787198 + MER5A DNA MER1_type 9 187 -2 748 242 94 69 chr20 56366804 56367167 -15786715 - MLT1L LTR MaLR -210 405 34 2673 68 0 0 chr20 56367168 56367478 -15786404 + AluY SINE Alu 1 310 -1 240 86 0 0 chr20 56367536 56367571 -15786311 + (TG)n Simple_repeat Simple_repeat 2 36 0 252 246 8 107 chr20 56367706 56367828 -15786054 - LTR67 LTR ERVL -22 535 426 903 206 38 0 chr20 56368300 56368509 -15785373 - MER20 DNA MER1_type 0 219 3 678 224 161 31 chr20 56368897 56369232 -15784650 + MER57A LTR ERV1 67 403 0 310 281 150 12 chr20 56369368 56369535 -15784347 - MIR SINE MIR -51 211 22 183 352 56 19 chr20 56369722 56369830 -15784052 + L2 LINE L2 3147 3258 -14 201 245 38 0 chr20 56369875 56369928 -15783954 + L2 LINE L2 3253 3307 -6 322 379 0 0 chr20 56370940 56371114 -15782768 + (TG)n Simple_repeat Simple_repeat 2 175 0 402 235 25 53 chr20 56371426 56371621 -15782261 + MLT1K LTR MaLR 144 294 -294 1876 167 0 46 chr20 56371621 56371944 -15781938 + AluJo SINE Alu 1 308 -4 268 351 9 0 chr20 56372244 56372355 -15781527 + L3 LINE CR1 1446 1557 -20 22 0 0 0 chr20 56372461 56372483 -15781399 + AT_rich Low_complexity Low_complexity 1 22 0 1308 256 48 5 chr20 56373615 56374013 -15779869 - L1ME3A LINE L1 -5 6165 5751 234 277 64 0 chr20 56374199 56374293 -15779589 + MIR3 SINE MIR 77 176 -32 1806 162 10 14 chr20 56474329 56474626 -15679256 - AluJb SINE Alu -16 296 1 257 338 30 46 chr20 56474628 56474722 -15679160 - L1MC5 LINE L1 -178 7783 7689 1108 237 9 0 chr20 56474722 56474937 -15678945 + MER20 DNA MER1_type 3 219 0 257 338 30 46 chr20 56474937 56475144 -15678738 - L1MC5 LINE L1 -272 7689 7487 1193 190 9 18 chr20 56475461 56475682 -15678200 + MER20 DNA MER1_type 1 219 0 264 271 35 0 chr20 56476096 56476181 -15677701 - MER113 DNA MER1_type? -99 422 335 420 250 90 6 chr20 56476193 56476349 -15677533 + MLT1J LTR MaLR 247 415 -96 384 293 77 15 chr20 56477014 56477261 -15676621 + MLT1K LTR MaLR 294 584 -4 432 332 40 15 chr20 56477487 56477689 -15676193 - MIR SINE MIR -9 253 47 434 157 35 17 chr20 56478014 56478129 -15675753 - L2 LINE L2 -277 3036 2920 940 202 42 19 chr20 56478340 56478553 -15675329 + MLT1D LTR MaLR 288 505 0 1637 160 13 39 chr20 56478569 56478881 -15675001 + AluJo SINE Alu 1 304 -8 243 338 0 0 chr20 56479333 56479407 -15674475 + L2 LINE L2 3235 3308 -5 397 229 115 16 chr20 56480082 56480204 -15673678 - MIR SINE MIR -109 153 20 720 313 23 19 chr20 56480476 56480732 -15673150 + MIR SINE MIR 6 262 0 1060 177 27 32 chr20 56480798 56481018 -15672864 - MER20 DNA MER1_type 0 219 1 592 269 13 75 chr20 56481344 56481571 -15672311 + MER102a DNA MER1_type 118 330 0 282 312 124 11 chr20 56482431 56482617 -15671265 + MER113 DNA MER1_type? 3 209 -312 849 271 119 25 chr20 56482789 56483323 -15670559 + L2 LINE L2 2728 3312 -1 258 217 17 0 chr20 56483779 56483839 -15670043 + MLT1L LTR MaLR 217 277 -338 482 283 190 37 chr20 56484990 56485364 -15668518 - L2 LINE L2 0 3313 2883 1274 135 10 0 chr20 56485366 56485559 -15668323 + AluJo SINE Alu 1 195 -117 321 131 49 0 chr20 56485559 56485620 -15668262 + G-rich Low_complexity Low_complexity 4 67 0 401 250 23 12 chr20 56485620 56485792 -15668090 + GA-rich Low_complexity Low_complexity 1 174 0 428 320 33 0 chr20 56486540 56486693 -15667189 + Charlie8 DNA MER1_type 7 164 -2253 270 315 136 15 chr20 56486721 56487299 -15666583 + L1 LINE L1 4737 5399 -749 951 208 22 40 chr20 56487331 56487557 -15666325 + MER58A DNA MER1_type 1 222 -2 2192 97 7 3 chr20 56487557 56487865 -15666017 + AluSp SINE Alu 1 309 -4 342 246 0 92 chr20 56487872 56488002 -15665880 - L1MC4 LINE L1 -1339 6703 6586 477 230 135 0 chr20 56488843 56488969 -15664913 + MIR SINE MIR 48 190 -72 1180 108 0 0 chr20 56489800 56489957 -15663925 + AluSp SINE Alu 137 293 -20 642 165 9 0 chr20 56489961 56490070 -15663812 + MER58A DNA MER1_type 37 146 0 276 266 62 9 chr20 56490169 56490282 -15663600 + L2 LINE L2 2538 2656 -658 230 313 15 0 chr20 56490282 56490349 -15663533 + (CA)n Simple_repeat Simple_repeat 2 69 0 248 206 0 48 chr20 56490349 56490412 -15663470 + L2 LINE L2 3175 3234 -38 289 296 146 41 chr20 56490437 56490512 -15663370 - L2 LINE L2 -133 3180 3114 2370 72 0 3 chr20 56490512 56490817 -15663065 + AluY SINE Alu 1 304 -7 289 296 146 41 chr20 56490817 56491008 -15662874 - L2 LINE L2 -199 3114 2886 264 290 0 0 chr20 56491095 56491157 -15662725 + MIR SINE MIR 6 67 -195 656 274 85 5 chr20 56491917 56492140 -15661742 + MIR SINE MIR 22 262 0 307 121 35 17 chr20 56492859 56492917 -15660965 + L2 LINE L2 3193 3251 -62 2421 81 0 0 chr20 56492934 56493244 -15660638 - AluY SINE Alu -1 310 1 616 298 121 48 chr20 56493397 56493770 -15660112 + MLT1J LTR MaLR 108 507 -4 302 304 150 9 chr20 56493780 56494068 -15659814 + MLT1L LTR MaLR 222 615 0 200 308 0 0 chr20 56494097 56494149 -15659733 - L2 LINE L2 -225 3047 2996 194 299 23 0 chr20 56494602 56494689 -15659193 - L2 LINE L2 -299 2973 2885 188 377 18 9 chr20 56494716 56494830 -15659052 + L2 LINE L2 3198 3312 -1 262 281 109 107 chr20 56495588 56495926 -15657956 + L2 LINE L2 2911 3249 -64 228 264 28 14 chr20 56495965 56496037 -15657845 + GA-rich Low_complexity Low_complexity 4 76 0 413 329 55 7 chr20 56496065 56496211 -15657671 + MIR SINE MIR 107 259 -3 311 221 61 99 chr20 56496422 56496553 -15657329 - MIR SINE MIR -21 187 62 344 276 78 0 chr20 56496983 56497099 -15656783 + MIR SINE MIR 13 137 -125 487 204 88 0 chr20 56497272 56497385 -15656497 + MIR SINE MIR 78 200 -62 771 286 158 42 chr20 56497402 56497951 -15655931 + MLT1L LTR MaLR 3 615 0 192 239 87 0 chr20 56498535 56498581 -15655301 + L2 LINE L2 2075 2124 -1190 1001 274 116 31 chr20 56498581 56499449 -15654433 + L2 LINE L2 2344 3298 -15 882 257 45 5 chr20 56500243 56500465 -15653417 - MIR SINE MIR 0 262 32 324 225 25 0 chr20 56501010 56501090 -15652792 + MIR SINE MIR 58 139 -69 278 200 0 0 chr20 56501359 56501409 -15652473 - MER81 DNA DNA -7 107 58 2388 163 24 31 chr20 56501420 56501483 -15652399 + L1MB3 LINE L1 5730 5792 -391 1402 211 71 29 chr20 56501483 56501833 -15652049 + MLT1A1 LTR MaLR 1 365 0 2388 163 24 31 chr20 56501833 56502176 -15651706 + L1MB3 LINE L1 5792 6135 -48 2208 107 0 0 chr20 56502176 56502475 -15651407 + AluSg SINE Alu 1 299 -11 2388 163 24 31 chr20 56502475 56502521 -15651361 + L1MB3 LINE L1 6135 6180 -3 846 185 76 38 chr20 56502958 56503169 -15650713 + MER20 DNA MER1_type 1 219 0 452 264 90 19 chr20 56503881 56504036 -15649846 - MIR SINE MIR 0 262 97 2283 103 0 3 chr20 56504122 56504434 -15649448 + AluSx SINE Alu 1 311 -1 1102 166 5 16 chr20 56504436 56504451 -15649431 + AluJb SINE Alu 121 135 -177 2014 124 14 0 chr20 56504451 56504741 -15649141 + AluSx SINE Alu 1 294 -18 1102 166 5 16 chr20 56504741 56504918 -15648964 + AluJb SINE Alu 135 311 -1 2047 151 39 22 chr20 56504932 56505290 -15648592 + THE1B LTR MaLR 1 364 0 372 303 106 0 chr20 56505312 56505454 -15648428 - L2 LINE L2 -238 3075 2919 * 689 254 35 6 chr20 56505432 56505605 -15648277 - MIR SINE MIR -83 179 2 581 327 0 0 chr20 56505605 56505769 -15648113 - MIR SINE MIR -55 207 44 266 233 17 0 chr20 56506326 56506386 -15647496 - MIR SINE MIR -79 183 123 1189 250 96 30 chr20 56506627 56507386 -15646496 + L2 LINE L2 2498 3312 -1 336 143 0 0 chr20 56508005 56508061 -15645821 + (GGGA)n Simple_repeat Simple_repeat 1 56 0 324 70 0 0 chr20 56508095 56508138 -15645744 + (TGGA)n Simple_repeat Simple_repeat 4 46 0 312 327 6 44 chr20 56508165 56508324 -15645558 + (TGGA)n Simple_repeat Simple_repeat 4 156 0 1297 286 56 25 chr20 56508385 56508981 -15644901 + L2 LINE L2 2704 3312 -1 622 348 45 14 chr20 56509993 56510280 -15643602 - MER102b DNA MER1_type -45 296 1 186 292 0 0 chr20 56510287 56510335 -15643547 - L2 LINE L2 -339 2974 2927 199 309 29 0 chr20 56510566 56510634 -15643248 - L2 LINE L2 -2 3311 3242 194 222 22 0 chr20 56510715 56510760 -15643122 + L2 LINE L2 3136 3181 -91 891 299 87 7 chr20 56511092 56511638 -15642244 + L2 LINE L2 2717 3313 0 581 268 60 0 chr20 56511853 56512036 -15641846 - MIR SINE MIR -40 222 29 1281 135 161 38 chr20 56512064 56512331 -15641551 + AluJo SINE Alu 1 300 -12 439 270 9 0 chr20 56512473 56512584 -15641298 + MIR SINE MIR 80 191 -71 793 274 162 29 chr20 56513407 56513951 -15639931 + L2 LINE L2 2004 2619 -695 736 188 0 7 chr20 56514367 56514511 -15639371 + MLT1B LTR MaLR 240 382 -8 405 185 11 11 chr20 56514549 56514641 -15639241 + LTR33A LTR ERVL 416 507 -16 330 235 78 115 chr20 56514641 56514884 -15638998 - MER112 DNA MER1_type 0 260 27 326 258 183 0 chr20 56515428 56515548 -15638334 - MIR SINE MIR -119 143 2 647 250 21 0 chr20 56515784 56515928 -15637954 - MIR SINE MIR -102 160 14 360 291 63 34 chr20 56516111 56516286 -15637596 + Charlie8 DNA MER1_type 1 180 -2237 607 325 21 35 chr20 56516287 56516626 -15637256 - L2 LINE L2 -710 2604 2271 287 281 34 0 chr20 56516736 56516825 -15637057 - MIR SINE MIR -88 174 83 216 182 73 18 chr20 56517126 56517181 -15636701 + MIR SINE MIR 88 145 -63 364 181 24 24 chr20 56517974 56518057 -15635825 + Charlie4 DNA MER1_type 1879 1961 0 502 311 22 27 chr20 56518132 56518315 -15635567 + L1ME3A LINE L1 5731 5912 -258 1775 163 0 0 chr20 56518327 56518609 -15635273 - AluJo SINE Alu -30 282 1 317 287 207 11 chr20 56518835 56519009 -15634873 + L1ME3A LINE L1 5963 6170 0 248 297 40 20 chr20 56519361 56519462 -15634420 + MIR3 SINE MIR 81 183 -25 362 21 21 0 chr20 56519604 56519651 -15634231 + (TCCA)n Simple_repeat Simple_repeat 1 48 0 2007 181 16 19 chr20 56519703 56519997 -15633885 + MLT1A1 LTR MaLR 3 296 -69 1991 110 3 17 chr20 56519997 56520326 -15633556 - AluY SINE Alu 0 311 1 2131 125 0 0 chr20 56520326 56520631 -15633251 - AluSx SINE Alu -7 305 1 2007 181 16 19 chr20 56520631 56520699 -15633183 + MLT1A1 LTR MaLR 294 365 0 426 260 78 73 chr20 56520779 56520983 -15632899 - L2 LINE L2 -8 3305 3101 296 291 182 0 chr20 56521192 56521357 -15632525 - L2 LINE L2 -526 2788 2594 180 77 0 0 chr20 56521360 56521386 -15632496 + (TG)n Simple_repeat Simple_repeat 2 27 0 206 133 0 44 chr20 56521386 56521431 -15632451 + (CATATA)n Simple_repeat Simple_repeat 4 46 0 1025 203 103 47 chr20 56521431 56521751 -15632131 - L1ME3A LINE L1 0 6170 5833 1188 256 69 15 chr20 56521788 56522194 -15631688 - L1ME3A LINE L1 -454 5708 5281 992 212 5 10 chr20 56522194 56522392 -15631490 - MER58A DNA MER1_type 0 224 28 1748 294 67 5 chr20 56522404 56523018 -15630864 - L1ME3A LINE L1 -870 5276 4617 456 104 0 0 chr20 56523018 56523085 -15630797 + (CATA)n Simple_repeat Simple_repeat 4 70 0 1748 294 67 5 chr20 56523085 56523123 -15630759 - L1ME3A LINE L1 -1529 4617 4583 613 212 222 15 chr20 56523237 56523397 -15630485 + MLT2B1 LTR ERVL 282 492 -28 234 0 0 0 chr20 56523397 56523423 -15630459 + (CA)n Simple_repeat Simple_repeat 2 27 0 613 212 222 15 chr20 56523423 56523460 -15630422 + MLT2B1 LTR ERVL 492 520 0 227 339 43 26 chr20 56523468 56523583 -15630299 - L2 LINE L2 -896 2418 2302 527 276 17 39 chr20 56523601 56523782 -15630100 - MIR SINE MIR -23 239 63 2198 102 0 16 chr20 56523788 56524103 -15629779 - AluSg SINE Alu 0 310 1 422 266 237 6 chr20 56525236 56525405 -15628477 - MIR SINE MIR -19 243 36 203 267 0 0 chr20 56525432 56525477 -15628405 - MIR SINE MIR -55 153 109 317 272 16 40 chr20 56525581 56525706 -15628176 - MIR SINE MIR -71 137 16 231 294 8 25 chr20 56525860 56525979 -15627903 + (TCCA)n Simple_repeat Simple_repeat 1 117 0 261 299 22 22 chr20 56526032 56526166 -15627716 + (TCCA)n Simple_repeat Simple_repeat 1 134 0 249 314 13 19 chr20 56526252 56526408 -15627474 + (TCCA)n Simple_repeat Simple_repeat 3 157 0 249 192 46 146 chr20 56526651 56526709 -15627173 - MIR3 SINE MIR -6 202 162 1500 172 9 64 chr20 56526709 56527052 -15626830 + MER33 DNA MER1_type 1 324 0 249 192 46 146 chr20 56527052 56527123 -15626759 - MIR3 SINE MIR -45 163 86 243 261 58 0 chr20 56527517 56527586 -15626296 - MIR SINE MIR -115 147 75 2013 113 7 16 chr20 56527624 56527933 -15625949 - AluSq SINE Alu -7 306 1 361 319 59 6 chr20 56527954 56528123 -15625759 + L2 LINE L2 3117 3294 -19 2146 105 30 0 chr20 56528354 56528652 -15625230 + AluSx SINE Alu 1 305 -7 371 217 24 0 chr20 56528880 56528963 -15624919 + MLT1J LTR MaLR 80 164 -347 236 292 71 9 chr20 56529056 56529169 -15624713 + MLT1J LTR MaLR 308 427 -84 599 162 86 76 chr20 56530473 56530681 -15623201 - MIR SINE MIR -29 233 6 337 38 0 38 chr20 56530933 56530986 -15622896 + (TTCC)n Simple_repeat Simple_repeat 4 54 0 2191 98 18 0 chr20 56530989 56531275 -15622607 - AluSx SINE Alu -21 291 1 444 293 36 0 chr20 56531477 56531617 -15622265 - MIR SINE MIR -8 254 110 870 295 22 40 chr20 56531640 56532091 -15621791 + Charlie7 DNA MER1_type 275 717 -1895 386 126 35 92 chr20 56532383 56532470 -15621412 + MIR SINE MIR 110 191 -71 326 265 40 49 chr20 56532873 56533067 -15620815 + MLT1L LTR MaLR 121 308 -203 366 290 68 19 chr20 56534175 56534337 -15619545 - MIR SINE MIR -76 186 17 392 261 172 6 chr20 56534438 56534618 -15619264 - Charlie8 DNA MER1_type -2202 215 6 903 279 68 30 chr20 56534918 56535312 -15618570 - L2 LINE L2 -78 3235 2827 330 292 29 0 chr20 56535783 56535906 -15617976 + MIR SINE MIR 1 140 -68 195 100 0 0 chr20 56535910 56535940 -15617942 + (ATG)n Simple_repeat Simple_repeat 3 32 0 336 256 94 0 chr20 56535978 56536095 -15617787 - MIR SINE MIR -96 166 39 262 261 114 0 chr20 56536100 56536188 -15617694 + MIR SINE MIR 163 260 -2 185 263 242 0 chr20 56536686 56536785 -15617097 - L2 LINE L2 0 3272 3150 658 254 104 12 chr20 56536870 56537043 -15616839 - MIR SINE MIR -68 194 6 21 36 0 0 chr20 56537084 56537112 -15616770 + AT_rich Low_complexity Low_complexity 1 28 0 613 293 104 13 chr20 56537136 56537575 -15616307 - L2 LINE L2 -255 3058 2589 701 255 125 10 chr20 56537958 56538158 -15615724 + MER58A DNA MER1_type 1 223 -1 350 261 252 4 chr20 56538165 56538500 -15615382 + MLT1J LTR MaLR 53 502 -9 450 255 130 31 chr20 56538607 56538768 -15615114 - MIR SINE MIR -80 182 6 232 190 17 0 chr20 56539191 56539249 -15614633 + L2 LINE L2 2915 2973 -341 2280 91 0 53 chr20 56539266 56539585 -15614297 + AluSg SINE Alu 4 305 -5 2257 111 0 0 chr20 56539589 56539878 -15614004 + AluSx SINE Alu 1 289 -23 1178 173 13 59 chr20 56539942 56540179 -15613703 + AluJo SINE Alu 71 296 -16 685 90 0 9 chr20 56540189 56540300 -15613582 + L1PA8 LINE L1 6063 6172 0 2438 176 23 39 chr20 56540308 56541125 -15612757 + L1M4 LINE L1 4794 5590 -588 323 252 21 70 chr20 56541126 56541269 -15612613 + MLT1K LTR MaLR 447 582 -6 279 370 103 35 chr20 56541464 56541597 -15612285 + L3 LINE CR1 1115 1237 -340 180 0 0 0 chr20 56541597 56541617 -15612265 + (CTTG)n Simple_repeat Simple_repeat 3 22 0 279 370 103 35 chr20 56541617 56541802 -15612080 + L3 LINE CR1 1237 1455 -122 401 360 89 0 chr20 56541877 56542091 -15611791 + MIR SINE MIR 14 246 -16 863 196 32 21 chr20 56542191 56542380 -15611502 - MIR SINE MIR -2 260 70 755 291 62 13 chr20 56543120 56543426 -15610456 + MLT1K LTR MaLR 181 501 -87 214 200 0 0 chr20 56543917 56543957 -15609925 + A-rich Low_complexity Low_complexity 1 40 0 242 315 0 22 chr20 56544236 56544354 -15609528 + MIR SINE MIR 53 166 -42 585 256 24 82 chr20 56544358 56544565 -15609317 + MER102b DNA MER1_type 144 338 -3 248 128 0 21 chr20 56544732 56544779 -15609103 + (ATGGTG)n Simple_repeat Simple_repeat 4 49 0 464 311 64 15 chr20 56544809 56545200 -15608682 + L1MEc LINE L1 2081 2449 -3766 316 246 141 21 chr20 56545212 56545354 -15608528 - MIR SINE MIR -47 215 57 675 244 47 56 chr20 56545383 56545596 -15608286 - MIR SINE MIR -3 259 49 246 184 103 11 chr20 56546041 56546128 -15607754 + L1MB8 LINE L1 5257 5351 -795 1586 240 44 30 chr20 56546139 56546883 -15606999 + L2 LINE L2 2560 3313 0 320 275 46 9 chr20 56547426 56547535 -15606347 + Charlie8 DNA MER1_type 25 137 -2280 1192 292 147 14 chr20 56547572 56548553 -15605329 - L2 LINE L2 -3 3310 2196 1999 216 14 0 chr20 56548553 56548979 -15604903 + L1MB8 LINE L1 5669 6100 -78 374 285 38 0 chr20 56548988 56549146 -15604736 - L2 LINE L2 -1107 2207 2044 653 305 11 5 chr20 56550566 56550753 -15603129 + MIR SINE MIR 2 189 -73 533 204 63 84 chr20 56550759 56550923 -15602959 - MIR SINE MIR -75 187 26 990 186 14 28 chr20 56550923 56551138 -15602744 - MER58C DNA MER1_type 0 215 4 533 204 63 84 chr20 56551138 56551164 -15602718 - MIR SINE MIR -236 26 1 339 280 43 32 chr20 56551169 56551262 -15602620 - Charlie8 DNA MER1_type -2313 104 11 397 161 36 38 chr20 56552061 56552175 -15601707 + MLT1K LTR MaLR 139 248 -340 458 249 180 37 chr20 56552443 56552688 -15601194 + MLT1K LTR MaLR 282 561 -27 737 217 74 21 chr20 56552980 56553169 -15600713 + MER58A DNA MER1_type 26 224 0 361 273 68 68 chr20 56553185 56553476 -15600406 + L1ME3A LINE L1 5665 5950 -220 192 40 0 0 chr20 56553872 56553897 -15599985 + (TAA)n Simple_repeat Simple_repeat 2 26 0 399 329 12 18 chr20 56553970 56554140 -15599742 - MIR SINE MIR -85 177 9 350 237 133 37 chr20 56554551 56554686 -15599196 - L2 LINE L2 0 3313 3166 202 363 100 6 chr20 56554677 56554837 -15599045 - MIR SINE MIR -10 252 78 * 1063 296 83 30 chr20 56555390 56555495 -15598387 + L2 LINE L2 2092 2190 -1124 2284 117 7 0 chr20 56555495 56555795 -15598087 - AluSx SINE Alu -10 302 1 1063 296 83 30 chr20 56555795 56556196 -15597686 + L2 LINE L2 2190 2625 -689 1304 214 130 20 chr20 56556204 56556611 -15597271 + MLT1C LTR MaLR 8 459 -8 318 203 13 13 chr20 56556664 56556743 -15597139 + L2 LINE L2 2696 2774 -540 668 241 100 12 chr20 56556820 56556832 -15597050 + L1ME3 LINE L1 5891 5901 -261 339 25 0 0 chr20 56556832 56556872 -15597010 + (CA)n Simple_repeat Simple_repeat 1 40 0 668 241 100 12 chr20 56556872 56557108 -15596774 + L1ME3 LINE L1 5901 6161 -1 1813 179 6 10 chr20 56557131 56557443 -15596439 + AluJo SINE Alu 1 311 -1 811 288 119 43 chr20 56557446 56557946 -15595936 + L2 LINE L2 2777 3313 0 296 282 0 69 chr20 56557952 56558083 -15595799 - MIR SINE MIR -112 150 29 1068 299 67 15 chr20 56558430 56558905 -15594977 + Tigger8 DNA MER2_type 138 637 -29 1060 268 129 9 chr20 56559058 56559514 -15594368 + MLT1J LTR MaLR 1 511 0 1409 253 110 41 chr20 56559692 56560109 -15593773 + MLT1K LTR MaLR 63 450 -138 285 29 0 0 chr20 56560109 56560143 -15593739 + (TTG)n Simple_repeat Simple_repeat 2 35 0 1409 253 110 41 chr20 56560143 56560156 -15593726 + MLT1K LTR MaLR 450 461 -127 2154 131 3 16 chr20 56560156 56560470 -15593412 - AluSx SINE Alu -2 310 1 1409 253 110 41 chr20 56560470 56560529 -15593353 + MLT1K LTR MaLR 461 587 -1 1088 188 0 5 chr20 56560635 56560832 -15593050 + MER58A DNA MER1_type 29 224 0 624 241 72 6 chr20 56561295 56561461 -15592421 + MIR SINE MIR 2 178 -84 328 268 88 14 chr20 56562096 56562243 -15591639 - MIR SINE MIR -68 194 32 607 244 28 28 chr20 56562389 56562569 -15591313 + MIR SINE MIR 56 235 -27 563 294 93 14 chr20 56563310 56563524 -15590358 + MIR SINE MIR 32 262 0 261 0 0 0 chr20 56563634 56563663 -15590219 + (A)n Simple_repeat Simple_repeat 1 29 0 228 319 44 26 chr20 56563819 56563932 -15589950 + L2 LINE L2 3194 3308 -5 863 266 106 48 chr20 56563999 56564435 -15589447 + MLT1K LTR MaLR 120 580 -8 519 238 62 12 chr20 56564550 56564710 -15589172 + MER117 DNA MER1_type 1 168 -29 219 320 0 0 chr20 56565225 56565300 -15588582 - MIR3 SINE MIR -41 167 93 693 313 101 12 chr20 56565408 56565714 -15588168 + L2 LINE L2 2700 2977 -336 774 158 47 53 chr20 56565714 56565904 -15587978 - MER53 DNA DNA 0 189 1 693 313 101 12 chr20 56565904 56566140 -15587742 + L2 LINE L2 2977 3298 -15 946 288 4 0 chr20 56566151 56566401 -15587481 + MIR SINE MIR 6 256 -6 532 309 57 20 chr20 56566689 56566935 -15586947 + LTR16A LTR ERVL 16 270 -180 30 45 0 0 chr20 56567119 56567163 -15586719 + AT_rich Low_complexity Low_complexity 1 44 0 538 285 43 11 chr20 56567245 56567431 -15586451 - MER113 DNA MER1_type? -229 292 101 694 118 0 0 chr20 56567431 56567533 -15586349 - AluSg/x SINE Alu -16 294 193 1096 190 0 0 chr20 56567766 56567945 -15585937 - AluJb SINE Alu 0 312 134 690 294 153 24 chr20 56567953 56568457 -15585425 - L2 LINE L2 -48 3265 2687 742 244 115 5 chr20 56568727 56568936 -15584946 - MIR SINE MIR -10 252 21 624 264 13 0 chr20 56569509 56569668 -15584214 - MIR SINE MIR -71 191 31 414 234 144 5 chr20 56569770 56569958 -15583924 + L2 LINE L2 2550 2763 -551 486 227 114 34 chr20 56570027 56570203 -15583679 - MIR SINE MIR -4 258 69 405 0 0 0 chr20 56570409 56570454 -15583428 + (ATG)n Simple_repeat Simple_repeat 3 47 0 1051 194 38 0 chr20 56570481 56570692 -15583190 - MER20 DNA MER1_type 0 219 1 228 241 36 48 chr20 56570733 56570816 -15583066 - MIR SINE MIR -85 177 96 241 221 73 15 chr20 56571051 56571119 -15582763 - MIR3 SINE MIR -129 79 8 430 264 39 8 chr20 56571777 56571906 -15581976 - MIR SINE MIR -44 218 86 597 209 43 91 chr20 56572192 56572379 -15581503 + MER20 DNA MER1_type 1 178 -41 2134 111 3 40 chr20 56572417 56572741 -15581141 - AluSx SINE Alu 0 312 1 1276 265 91 5 chr20 56572751 56573182 -15580700 + L1ME3 LINE L1 5694 6162 0 22 0 0 0 chr20 56573218 56573240 -15580642 + AT_rich Low_complexity Low_complexity 1 22 0 192 77 0 0 chr20 56573304 56573330 -15580552 + (TGAA)n Simple_repeat Simple_repeat 1 26 0 630 0 0 0 chr20 56573360 56573430 -15580452 + (CA)n Simple_repeat Simple_repeat 2 71 0 217 200 22 0 chr20 56573456 56573501 -15580381 + MIR SINE MIR 88 133 -75 259 241 72 0 chr20 56574511 56574594 -15579288 - L2 LINE L2 -25 3288 3200 323 311 118 31 chr20 56574651 56575066 -15578816 - L1MC4a LINE L1 -1596 6212 5762 1707 242 100 38 chr20 56576160 56576186 -15577696 + L2 LINE L2 2185 2208 -1105 872 84 61 0 chr20 56576186 56576317 -15577565 - MER85 DNA T2_type 0 139 1 1707 242 100 38 chr20 56576317 56577101 -15576781 + L2 LINE L2 2208 3050 -263 199 188 208 0 chr20 56577144 56577192 -15576690 - MIR SINE MIR -118 144 87 256 321 88 7 chr20 56577284 56577421 -15576461 + MIR SINE MIR 46 193 -69 * 438 270 10 0 chr20 56577417 56577517 -15576365 + L2 LINE L2 3194 3294 -19 471 262 35 0 chr20 56578394 56578535 -15575347 + L1ME3 LINE L1 5988 6133 -29 1224 253 132 3 chr20 56578870 56579242 -15574640 + LTR16C LTR ERVL 72 491 0 265 292 62 21 chr20 56579553 56579649 -15574233 + MER117 DNA MER1_type 96 195 -2 246 273 39 0 chr20 56579690 56579767 -15574115 - MIR SINE MIR -107 101 22 1117 152 48 9 chr20 56579789 56579999 -15573883 + MER20 DNA MER1_type 1 218 -1 647 263 151 37 chr20 56580080 56580483 -15573399 + L2 LINE L2 2852 3300 -13 530 253 158 16 chr20 56580593 56580783 -15573099 - MIR SINE MIR -5 257 41 495 261 95 40 chr20 56581480 56581736 -15572146 + L1ME4a LINE L1 5748 6029 -92 1402 270 81 25 chr20 56581736 56582218 -15571664 + MLT1J LTR MaLR 1 509 -2 495 261 95 40 chr20 56582218 56582310 -15571572 + L1ME4a LINE L1 6029 6115 -6 651 283 83 43 chr20 56583077 56583184 -15570698 + L2 LINE L2 2904 3005 -308 2806 64 14 0 chr20 56583184 56583543 -15570339 - THE1B LTR MaLR 0 364 1 651 283 83 43 chr20 56583543 56583809 -15570073 + L2 LINE L2 3005 3292 -21 245 304 22 22 chr20 56583950 56584042 -15569840 + MIR SINE MIR 115 206 -56 540 192 47 111 chr20 56584430 56584602 -15569280 - LTR16C LTR ERVL -8 483 323 308 304 89 6 chr20 56584681 56584839 -15569043 - LTR16C LTR ERVL -277 214 44 198 288 0 38 chr20 56585124 56585204 -15568678 - L2 LINE L2 -313 3000 2924 182 316 51 10 chr20 56585244 56585342 -15568540 + L2 LINE L2 3107 3208 -105 540 250 80 21 chr20 56585494 56585682 -15568200 + MIR SINE MIR 2 200 -62 2270 136 0 0 chr20 56585686 56585996 -15567886 + AluSx SINE Alu 1 310 -2 756 249 58 15 chr20 56586030 56586235 -15567647 + MIR SINE MIR 49 262 0 1651 160 17 42 chr20 56586255 56586542 -15567340 + AluJb SINE Alu 15 294 -18 215 279 16 0 chr20 56587145 56587206 -15566676 - L2 LINE L2 -11 3261 3200 920 274 95 31 chr20 56587264 56587621 -15566261 - L2 LINE L2 -10 3303 2924 546 297 35 10 chr20 56587661 56587863 -15566019 + L2 LINE L2 3107 3313 0 499 296 146 8 chr20 56588202 56588442 -15565440 + Charlie8 DNA MER1_type 5 277 -2140 250 264 0 28 chr20 56588504 56588576 -15565306 - MER117 DNA MER1_type -28 169 100 1009 200 28 9 chr20 56588729 56588944 -15564938 - MER20 DNA MER1_type 0 219 1 454 265 91 30 chr20 56588944 56589076 -15564806 + MIR SINE MIR 2 141 -121 680 192 40 68 chr20 56589076 56589116 -15564766 + L1MB8 LINE L1 5990 6030 -148 2351 115 0 0 chr20 56589116 56589421 -15564461 - AluSx SINE Alu -7 305 1 680 192 40 68 chr20 56589421 56589557 -15564325 + L1MB8 LINE L1 6030 6161 -17 207 335 32 38 chr20 56590328 56590486 -15563396 - MIR SINE MIR -46 162 6 2109 165 37 24 chr20 56590728 56590919 -15562963 + MLT1D LTR MaLR 1 188 -317 2013 159 3 0 chr20 56590919 56591228 -15562654 + AluSx SINE Alu 1 310 -2 2109 165 37 24 chr20 56591228 56591490 -15562392 + MLT1D LTR MaLR 188 460 -45 231 283 159 28 chr20 56591976 56592121 -15561761 - MIR SINE MIR -97 165 2 3453 103 4 8 chr20 56592225 56592722 -15561160 + MER1A DNA MER1_type 35 529 0 274 223 16 66 chr20 56592882 56593003 -15560879 + L2 LINE L2 2866 2980 -292 240 277 12 60 chr20 56593269 56593352 -15560530 + MIR SINE MIR 108 186 -76 273 300 0 0 chr20 56593359 56593429 -15560453 + MIR SINE MIR 69 138 -70 337 290 74 33 chr20 56593440 56593590 -15560292 + MIR3 SINE MIR 30 186 -22 458 293 157 43 chr20 56594116 56594512 -15559370 + L2 LINE L2 2863 3303 -10 245 324 37 37 chr20 56594528 56594664 -15559218 + MIR SINE MIR 97 232 -30 1050 265 59 31 chr20 56594664 56594931 -15558951 + L1ME3 LINE L1 5716 5999 -163 2052 100 72 0 chr20 56594931 56595210 -15558672 + AluSx SINE Alu 1 299 -13 1050 265 59 31 chr20 56595210 56595331 -15558551 + L1ME3 LINE L1 5999 6115 -47 1276 251 69 18 chr20 56595964 56596414 -15557468 + L2 LINE L2 2828 3300 -13 262 284 35 85 chr20 56596593 56596734 -15557148 - MER5A DNA MER1_type -18 171 38 2196 123 3 0 chr20 56596847 56597139 -15556743 + AluSx SINE Alu 1 293 -19 299 320 8 35 chr20 56597234 56597406 -15556476 - MER5A DNA MER1_type -3 186 7 324 358 46 25 chr20 56597635 56597875 -15556007 - L1ME LINE L1 -331 5790 5546 1092 170 0 0 chr20 56597907 56598078 -15555804 + AluSp SINE Alu 135 305 -8 229 344 31 0 chr20 56598136 56598232 -15555650 - MIR SINE MIR -6 256 158 2186 106 0 3 chr20 56598330 56598658 -15555224 + AluSx SINE Alu 1 327 0 410 247 107 20 chr20 56599245 56599395 -15554487 + MIR SINE MIR 89 251 -11 2332 122 0 0 chr20 56599403 56599714 -15554168 + AluSx SINE Alu 1 311 -1 181 172 0 0 chr20 56599916 56599945 -15553937 - L2 LINE L2 0 3272 3244 * 1813 236 112 6 chr20 56599936 56600578 -15553304 - L2 LINE L2 -270 3043 2332 231 296 73 34 chr20 56600574 56600753 -15553129 - L2 LINE L2 -97 3175 2990 * 349 310 54 8 chr20 56600877 56601006 -15552876 + MIR SINE MIR 16 150 -112 691 288 130 20 chr20 56601580 56601980 -15551902 - L2 LINE L2 -43 3270 2827 2098 120 57 20 chr20 56601983 56602334 -15551548 + THE1B LTR MaLR 1 364 0 185 225 0 0 chr20 56602561 56602601 -15551281 + MIR SINE MIR 109 148 -114 342 170 140 40 chr20 56603253 56603353 -15550529 - MIR SINE MIR -92 170 61 294 279 0 0 chr20 56604088 56604167 -15549715 + MIR SINE MIR 79 157 -105 563 250 62 92 chr20 56604346 56604618 -15549264 - MER102b DNA MER1_type 0 341 78 3402 222 45 40 chr20 56604619 56604710 -15549172 + L1ME1 LINE L1 4653 4742 -1424 2021 113 10 61 chr20 56604710 56605020 -15548862 + AluSx SINE Alu 1 294 -18 3402 222 45 40 chr20 56605020 56606427 -15547455 + L1ME1 LINE L1 4742 6145 -21 2592 197 131 141 chr20 56606468 56606756 -15547126 + L1MC4a LINE L1 6587 6876 -932 721 139 0 62 chr20 56606756 56606885 -15546997 + FLAM_C SINE Alu 3 123 -20 2592 197 131 141 chr20 56606885 56607823 -15546059 + L1MC4a LINE L1 6876 7808 0 269 285 177 0 chr20 56608076 56608206 -15545676 + MIR SINE MIR 40 192 -70 661 118 59 0 chr20 56608240 56608342 -15545540 - MSTD LTR MaLR -288 108 1 232 220 0 0 chr20 56608343 56608393 -15545489 - MIR SINE MIR -65 143 94 220 308 33 0 chr20 56608445 56608536 -15545346 + MIR SINE MIR 40 133 -75 2087 140 34 11 chr20 56608584 56608940 -15544942 + THE1B LTR MaLR 1 364 0 478 275 6 28 chr20 56609027 56609209 -15544673 - L2 LINE L2 -245 3068 2891 221 302 132 83 chr20 56609216 56609421 -15544461 - L2 LINE L2 -528 2786 2572 * 744 281 30 0 chr20 56609418 56609617 -15544265 + MIR SINE MIR 15 219 -43 824 260 77 0 chr20 56609634 56609934 -15543948 - L2 LINE L2 -734 2580 2258 2383 118 0 0 chr20 56611319 56611632 -15542250 - AluSq SINE Alu 0 313 1 2354 112 0 3 chr20 56612880 56613193 -15540689 + AluSx SINE Alu 1 312 0 372 189 0 0 chr20 56613214 56613288 -15540594 + GA-rich Low_complexity Low_complexity 2 75 0 234 194 16 32 chr20 56613290 56613352 -15540530 + G-rich Low_complexity Low_complexity 2 62 0 186 143 0 0 chr20 56613784 56613819 -15540063 + (A)n Simple_repeat Simple_repeat 1 35 0 234 180 0 0 chr20 56614026 56614076 -15539806 + A-rich Low_complexity Low_complexity 1 50 0 2264 152 28 26 chr20 56615076 56615503 -15538379 + MSTC LTR MaLR 1 428 0 500 262 115 16 chr20 56615804 56615996 -15537886 - MIR SINE MIR -3 259 49 265 242 22 0 chr20 56616225 56616316 -15537566 + (TGGA)n Simple_repeat Simple_repeat 1 93 0 180 195 0 49 chr20 56616372 56616413 -15537469 + MIR SINE MIR 213 251 -11 * 245 122 49 0 chr20 56616382 56616423 -15537459 + L2 LINE L2 3266 3308 -5 755 329 24 0 chr20 56616440 56616689 -15537193 + MIR SINE MIR 3 257 -5 189 0 0 0 chr20 56617568 56617589 -15536293 + (CA)n Simple_repeat Simple_repeat 1 21 0 484 222 193 40 chr20 56617716 56617892 -15535990 - MIR SINE MIR 0 262 60 838 251 27 50 chr20 56618153 56618412 -15535470 + Charlie8 DNA MER1_type 1 253 -2164 229 133 25 12 chr20 56618453 56618545 -15535337 + MIR SINE MIR 106 257 -5 2299 84 21 0 chr20 56618612 56618898 -15534984 + AluSp SINE Alu 1 292 -21 308 280 11 0 chr20 56618900 56618993 -15534889 - MIR SINE MIR -6 256 163 1982 161 102 51 chr20 56618994 56619236 -15534646 + L1MB7 LINE L1 5632 5860 -324 333 0 0 0 chr20 56619236 56619273 -15534609 + (CA)n Simple_repeat Simple_repeat 2 38 0 1982 161 102 51 chr20 56619273 56619342 -15534540 + L1MB7 LINE L1 5860 5924 -260 1926 149 7 0 chr20 56619342 56619660 -15534222 + AluSx SINE Alu 1 320 0 1982 161 102 51 chr20 56619660 56619857 -15534025 + L1MB7 LINE L1 5924 6168 -16 429 153 28 0 chr20 56619872 56619944 -15533938 - MIR SINE MIR -86 176 103 286 302 0 0 chr20 56620685 56620781 -15533101 + GA-rich Low_complexity Low_complexity 2 97 0 215 190 0 20 chr20 56621209 56621296 -15532586 - MIR SINE MIR -5 257 112 192 300 50 20 chr20 56621311 56621411 -15532471 + MIR SINE MIR 160 262 0 328 316 7 43 chr20 56621486 56621625 -15532257 + L2 LINE L2 3140 3273 -40 * 485 250 0 25 chr20 56621619 56621739 -15532143 + MIR SINE MIR 44 160 -102 977 126 68 90 chr20 56621797 56622019 -15531863 + MER20 DNA MER1_type 1 217 -2 334 405 0 6 chr20 56622039 56622197 -15531685 + L1ME3 LINE L1 5733 5889 -281 628 260 121 53 chr20 56622561 56622884 -15530998 + L1MC4a LINE L1 5592 5936 -1872 292 199 17 28 chr20 56623021 56623197 -15530685 + (TA)n Simple_repeat Simple_repeat 1 174 0 867 213 98 24 chr20 56623259 56623513 -15530369 + L1ME3 LINE L1 5888 6160 -2 384 306 153 11 chr20 56624670 56625030 -15528852 + L2 LINE L2 2537 2947 -367 189 255 20 0 chr20 56625029 56625080 -15528802 - MER5A DNA MER1_type -10 179 128 * 2053 108 54 0 chr20 56625321 56625600 -15528282 - AluSx SINE Alu -18 294 1 211 250 47 0 chr20 56626062 56626126 -15527756 - MIR SINE MIR -90 172 106 705 186 28 7 chr20 56626529 56626674 -15527208 - MIR SINE MIR -69 193 46 570 230 9 0 chr20 56626720 56626833 -15527049 + MER81 DNA DNA 1 114 0 222 264 72 72 chr20 56626882 56627052 -15526830 - MIR SINE MIR -1 261 92 926 145 0 0 chr20 56627243 56627374 -15526508 - FLAM_C SINE Alu -12 131 1 380 285 125 0 chr20 56627422 56627566 -15526316 + MIR SINE MIR 66 227 -35 1089 252 69 63 chr20 56627995 56628111 -15525771 + L2 LINE L2 2538 2652 -661 2371 173 68 2 chr20 56628111 56628540 -15525342 + MSTB2 LTR MaLR 1 457 0 1089 252 69 63 chr20 56628540 56629181 -15524701 + L2 LINE L2 2652 3312 -1 451 176 0 59 chr20 56629383 56629485 -15524397 + MER5A DNA MER1_type 14 109 -80 382 232 32 65 chr20 56630099 56630254 -15523628 + MLT1K LTR MaLR 91 240 -348 487 189 63 84 chr20 56630256 56630399 -15523483 + MLT1K LTR MaLR 449 588 0 205 385 62 8 chr20 56630440 56630570 -15523312 + L2 LINE L2 3136 3272 0 1052 268 165 8 chr20 56630579 56631518 -15522364 - L2 LINE L2 -1 3312 2132 300 320 49 33 chr20 56632188 56632310 -15521572 + MIR SINE MIR 21 141 -67 203 250 0 0 chr20 56632356 56632400 -15521482 - MIR SINE MIR -10 252 209 947 181 8 88 chr20 56632400 56632638 -15521244 - MER20 DNA MER1_type 0 219 1 194 227 0 23 chr20 56632646 56632690 -15521192 + L2 LINE L2 3188 3230 -83 652 318 5 9 chr20 56632886 56633097 -15520785 - MIR SINE MIR 0 262 53 298 270 40 0 chr20 56633160 56633234 -15520648 - L2 LINE L2 -11 3261 3185 184 289 111 33 chr20 56633397 56633487 -15520395 - L2 LINE L2 -250 3063 2967 532 320 37 25 chr20 56633815 56634172 -15519710 - L1MC4a LINE L1 -384 5737 5483 524 286 26 16 chr20 56634669 56634858 -15519024 - MIR SINE MIR -7 255 65 789 238 75 67 chr20 56634909 56635283 -15518599 + L2 LINE L2 2599 2975 -339 203 250 18 0 chr20 56635291 56635347 -15518535 - MIR SINE MIR -150 112 56 289 300 56 50 chr20 56635395 56635555 -15518327 + MIR SINE MIR 80 240 -22 372 132 15 15 chr20 56635910 56635978 -15517904 + MLT1K LTR MaLR 514 581 -7 1002 232 53 92 chr20 56636517 56636719 -15517163 - Charlie8 DNA MER1_type -1899 518 310 1862 168 16 13 chr20 56636719 56637023 -15516859 + AluJo SINE Alu 1 305 -7 2205 135 0 3 chr20 56637023 56637335 -15516547 + AluSx SINE Alu 1 311 -1 1002 232 53 92 chr20 56637335 56637600 -15516282 - Charlie8 DNA MER1_type -2105 312 68 938 135 0 0 chr20 56637600 56637733 -15516149 - AluSq/x SINE Alu -180 133 1 188 357 0 0 chr20 56637854 56637924 -15515958 + L2 LINE L2 3185 3254 -18 288 330 17 17 chr20 56637944 56638123 -15515759 + (CA)n Simple_repeat Simple_repeat 2 180 0 549 257 11 49 chr20 56638317 56638500 -15515382 + MIR3 SINE MIR 27 202 -6 221 233 0 85 chr20 56638666 56638855 -15515027 + (TAAA)n Simple_repeat Simple_repeat 3 175 0 24 32 0 0 chr20 56638960 56638991 -15514891 + AT_rich Low_complexity Low_complexity 1 31 0 573 286 91 5 chr20 56639000 56639199 -15514683 - MIR SINE MIR -4 258 43 235 186 136 0 chr20 56639542 56639601 -15514281 + L2 LINE L2 3238 3304 -9 379 200 114 0 chr20 56639608 56639713 -15514169 - MIR SINE MIR -86 176 60 553 257 48 86 chr20 56639782 56640097 -15513785 + L1MC4 LINE L1 7633 7935 -107 663 323 151 16 chr20 56640618 56641093 -15512789 - L2 LINE L2 0 3313 2773 2671 238 43 21 chr20 56641170 56641920 -15511962 + L1MDa LINE L1 2487 3260 -3280 2246 113 3 22 chr20 56642140 56642458 -15511424 + AluSx SINE Alu 1 312 0 501 203 16 56 chr20 56642650 56642725 -15511157 + MIR SINE MIR 3 79 -129 1247 215 71 130 chr20 56642725 56643385 -15510497 + MLT1E3 LTR MaLR 3 623 -1 501 203 16 56 chr20 56643385 56643471 -15510411 + MIR SINE MIR 79 162 -46 589 245 14 0 chr20 56643927 56644066 -15509816 - MIR SINE MIR -121 141 1 975 231 174 79 chr20 56644226 56644642 -15509240 - L2 LINE L2 -1 3312 2820 558 203 0 8 chr20 56644642 56644760 -15509122 + L1MB7 LINE L1 6049 6165 -19 975 231 174 79 chr20 56644760 56644958 -15508924 - L2 LINE L2 -493 2820 2642 231 309 93 14 chr20 56644974 56645113 -15508769 + MIR SINE MIR 62 211 -51 871 235 63 21 chr20 56645556 56645935 -15507947 + L2 LINE L2 2718 3125 -188 615 278 91 0 chr20 56645944 56646120 -15507762 + MIR SINE MIR 70 261 -1 557 226 17 0 chr20 56646164 56646279 -15507603 + L2 LINE L2 3197 3313 0 652 218 79 6 chr20 56646709 56646874 -15507008 - MIR SINE MIR -71 191 15 1161 145 4 57 chr20 56647038 56647265 -15506617 + MER20 DNA MER1_type 1 215 -4 2240 102 0 7 chr20 56647336 56647629 -15506253 + AluSx SINE Alu 1 291 -21 190 343 0 29 chr20 56648381 56648451 -15505431 + L2 LINE L2 3232 3299 -14 576 276 59 0 chr20 56648751 56648903 -15504979 + MIR SINE MIR 2 162 -100 564 260 34 17 chr20 56649823 56650000 -15503882 - MIR SINE MIR -77 185 6 207 217 0 43 chr20 56650143 56650189 -15503693 + MIR SINE MIR 45 88 -120 667 299 85 0 chr20 56650216 56650417 -15503465 + MIR SINE MIR 2 219 -43 182 278 0 56 chr20 56650823 56650895 -15502987 + L2 LINE L2 2992 3059 -213 658 184 152 32 chr20 56650961 56651178 -15502704 - MIR SINE MIR 0 262 20 237 286 48 0 chr20 56651736 56651799 -15502083 - MIR SINE MIR -60 148 83 478 230 109 124 chr20 56652851 56652992 -15500890 + MIR SINE MIR 2 139 -123 2189 95 3 14 chr20 56652992 56653286 -15500596 + AluSx SINE Alu 1 291 -21 478 230 109 124 chr20 56653286 56653409 -15500473 + MIR SINE MIR 139 262 0 38 89 0 0 chr20 56654155 56654256 -15499626 + GC_rich Low_complexity Low_complexity 1 101 0 21 0 0 0 chr20 56654283 56654304 -15499578 + GC_rich Low_complexity Low_complexity 1 21 0 240 210 24 32 chr20 56654358 56654482 -15499400 + (CGGG)n Simple_repeat Simple_repeat 2 124 0 * 278 172 23 46 chr20 56654400 56654487 -15499395 + G-rich Low_complexity Low_complexity 3 87 0 217 185 37 37 chr20 56655072 56655126 -15498756 + CT-rich Low_complexity Low_complexity 2 55 0 482 308 128 2 chr20 56655334 56655557 -15498325 + MIR SINE MIR 15 262 0 21 0 0 0 chr20 56656042 56656063 -15497819 + AT_rich Low_complexity Low_complexity 1 21 0 248 266 0 0 chr20 56656090 56656154 -15497728 + MIR SINE MIR 81 144 -64 455 293 135 24 chr20 56656192 56656341 -15497541 + MIR SINE MIR 26 206 -56 1040 136 50 59 chr20 56656341 56656500 -15497382 - MER20 DNA MER1_type 0 219 61 1738 179 17 10 chr20 56656500 56656797 -15497085 + AluJo SINE Alu 1 299 -13 1040 136 50 59 chr20 56656797 56656858 -15497024 - MER20 DNA MER1_type -158 61 1 455 293 135 24 chr20 56656858 56656916 -15496966 + MIR SINE MIR 206 256 -6 618 236 81 0 chr20 56657149 56657297 -15496585 + MIR SINE MIR 91 250 -12 717 252 117 8 chr20 56657335 56657601 -15496281 - MLT1L LTR MaLR -9 606 312 191 393 28 28 chr20 56657846 56657953 -15495929 - L2 LINE L2 -27 3286 3180 484 176 110 52 chr20 56657980 56658116 -15495766 - L2 LINE L2 -2 3311 3168 728 280 5 0 chr20 56659411 56659597 -15494285 + MIR SINE MIR 39 225 -37 684 241 96 11 chr20 56659626 56659813 -15494069 + MLT1L LTR MaLR 340 542 -73 2385 105 3 0 chr20 56659853 56660159 -15493723 - AluSx SINE Alu -5 307 1 2287 66 7 27 chr20 56660220 56660521 -15493361 + AluY SINE Alu 1 295 -16 1862 163 3 7 chr20 56660985 56661274 -15492608 - AluJb SINE Alu -20 292 5 198 143 0 0 chr20 56661274 56661309 -15492573 - MIR SINE MIR -13 249 215 1313 85 12 0 chr20 56661309 56661473 -15492409 - AluSq SINE Alu -147 166 1 246 206 0 48 chr20 56661478 56661541 -15492341 - MLT1J LTR MaLR -290 198 101 2228 267 97 26 chr20 56661715 56662841 -15491041 - L2 LINE L2 -40 3273 2064 2139 118 44 0 chr20 56663051 56663348 -15490534 + AluSx SINE Alu 1 310 -2 4523 126 7 1 chr20 56663532 56664249 -15489633 + L1PA13 LINE L1 5435 6155 -8 180 77 0 0 chr20 56664250 56664276 -15489606 + (GA)n Simple_repeat Simple_repeat 1 26 0 594 221 0 57 chr20 56664315 56664473 -15489409 + L1ME3A LINE L1 5814 5962 -208 264 337 36 42 chr20 56664522 56664715 -15489167 + L1ME3A LINE L1 5963 6154 -16 569 271 20 79 chr20 56664717 56665060 -15488822 + L1ME4a LINE L1 5574 5896 -225 389 209 122 71 chr20 56665098 56665164 -15488718 + L1ME4a LINE L1 5902 5963 -158 1889 109 127 0 chr20 56665164 56665439 -15488443 + AluSq SINE Alu 1 310 -3 389 209 122 71 chr20 56665439 56665568 -15488314 + L1ME4a LINE L1 5963 6107 -14 237 269 121 40 chr20 56665875 56666024 -15487858 - L1ME3A LINE L1 -222 5948 5788 816 297 40 20 chr20 56666068 56666418 -15487464 + MLT1J1 LTR MaLR 63 419 -27 2130 149 0 0 chr20 56666425 56666733 -15487149 - AluJb SINE Alu -4 308 1 213 39 0 0 chr20 56666758 56666784 -15487098 + (A)n Simple_repeat Simple_repeat 1 26 0 421 304 158 0 chr20 56667063 56667234 -15486648 + LTR67 LTR ERVL 349 546 -11 821 161 0 8 chr20 56667247 56667377 -15486505 - FRAM SINE Alu -18 158 30 1201 159 68 5 chr20 56667433 56667640 -15486242 - AluJo SINE Alu -92 220 1 956 194 87 0 chr20 56667667 56667873 -15486009 - MER58A DNA MER1_type 0 224 1 243 88 0 0 chr20 56668027 56668061 -15485821 + (TGAA)n Simple_repeat Simple_repeat 1 34 0 445 139 0 0 chr20 56668961 56669033 -15484849 + AluJ/FRAM SINE Alu 221 292 -20 257 316 11 21 chr20 56669033 56669128 -15484754 + L2 LINE L2 1920 2013 -1301 226 273 172 15 chr20 56669133 56669259 -15484623 + MIR SINE MIR 18 156 -62 422 234 14 69 chr20 56669288 56669433 -15484449 + L2 LINE L2 3177 3313 0 504 233 101 0 chr20 56669565 56669694 -15484188 - MLT1K LTR MaLR -1 587 446 291 302 181 28 chr20 56669691 56669899 -15483983 - MLT1K LTR MaLR -294 294 13 * 197 321 42 55 chr20 56669915 56670080 -15483802 + L2 LINE L2 2644 2806 -508 330 253 18 108 chr20 56670210 56670281 -15483601 + L2 LINE L2 1862 1911 -1403 1776 154 35 18 chr20 56670281 56670567 -15483315 + AluJb SINE Alu 1 291 -21 330 253 18 108 chr20 56670567 56670661 -15483221 + L2 LINE L2 1911 2012 -1302 832 243 88 17 chr20 56670830 56671203 -15482679 + MLT1L LTR MaLR 85 519 -96 189 369 51 25 chr20 56671267 56671424 -15482458 + L2 LINE L2 2210 2370 -944 755 286 157 31 chr20 56671520 56671840 -15482042 - L2 LINE L2 0 3313 3035 1933 167 7 0 chr20 56671840 56672139 -15481743 + AluJb SINE Alu 1 301 -11 755 286 157 31 chr20 56672139 56672389 -15481493 - L2 LINE L2 -278 3035 2668 860 221 22 30 chr20 56672407 56672638 -15481244 - MIR SINE MIR -1 261 33 183 42 0 0 chr20 56673783 56673807 -15480075 + (A)n Simple_repeat Simple_repeat 1 24 0 2449 194 116 12 chr20 56674066 56674654 -15479228 - L1ME2 LINE L1 -9 6155 5507 1949 178 0 6 chr20 56674661 56674975 -15478907 - AluJb SINE Alu 0 312 1 2144 104 0 4 chr20 56675178 56675456 -15478426 - AluSx SINE Alu -35 277 1 415 134 0 0 chr20 56675464 56675531 -15478351 + AluJ/FRAM SINE Alu 233 299 -13 280 273 81 43 chr20 56675535 56675696 -15478186 - L1ME4a LINE L1 -28 6093 5927 415 222 268 0 chr20 56675831 56675984 -15477898 + L2 LINE L2 3115 3308 -5 260 329 7 22 chr20 56675984 56676121 -15477761 - L1MC4a LINE L1 -1895 5913 5779 773 203 66 0 chr20 56676318 56676500 -15477382 + MIR SINE MIR 5 198 -64 305 310 46 11 chr20 56676698 56676872 -15477010 - L2 LINE L2 -1245 2069 1890 214 255 43 32 chr20 56677184 56677278 -15476604 + L2 LINE L2 2916 3010 -262 1710 172 20 29 chr20 56677282 56677625 -15476257 + MER58B DNA MER1_type 2 341 0 2158 117 0 0 chr20 56677643 56677963 -15475919 + AluSx SINE Alu 1 320 0 30 27 0 0 chr20 56678197 56678234 -15475648 + AT_rich Low_complexity Low_complexity 1 37 0 216 206 143 0 chr20 56678246 56678309 -15475573 + MIR3 SINE MIR 105 176 -32 245 319 0 0 chr20 56678498 56678570 -15475312 + Charlie8 DNA MER1_type 1357 1428 -989 377 346 31 0 chr20 56678800 56678927 -15474955 + L1MC4a LINE L1 5524 5654 -2154 351 248 203 20 chr20 56678928 56679081 -15474801 - MER5A DNA MER1_type 0 189 9 673 279 23 34 chr20 56679104 56679369 -15474513 + L1MC4a LINE L1 5665 5926 -1882 30 45 0 0 chr20 56679553 56679597 -15474285 + AT_rich Low_complexity Low_complexity 1 44 0 1978 121 58 25 chr20 56679677 56680040 -15473842 - THE1C LTR MaLR 0 375 1 271 227 30 0 chr20 56680062 56680128 -15473754 + (CA)n Simple_repeat Simple_repeat 2 69 0 186 253 200 0 chr20 56680166 56680241 -15473641 + MIR SINE MIR 22 111 -151 530 336 69 24 chr20 56680821 56680832 -15473050 - MIR SINE MIR 0 262 253 1069 142 0 18 chr20 56680832 56681001 -15472881 + FRAM SINE Alu 1 166 0 530 336 69 24 chr20 56681001 56681236 -15472646 - MIR SINE MIR -9 253 5 371 245 31 101 chr20 56681325 56681484 -15472398 + MIR SINE MIR 77 224 -38 1239 245 75 29 chr20 56681882 56682035 -15471847 - L2 LINE L2 0 3313 3168 1965 105 3 18 chr20 56682035 56682344 -15471538 + AluSx SINE Alu 1 305 0 1239 245 75 29 chr20 56682344 56682565 -15471317 - L2 LINE L2 -145 3168 2921 198 397 23 0 chr20 56682833 56682964 -15470918 - MIR3 SINE MIR -10 198 65 1983 127 10 0 chr20 56683257 56683557 -15470325 - AluSx SINE Alu -9 303 1 243 119 48 0 chr20 56683627 56683669 -15470213 - MIR SINE MIR -60 148 105 779 192 0 0 chr20 56683819 56683949 -15469933 + FRAM SINE Alu 1 130 -46 1427 145 4 25 chr20 56683967 56684208 -15469674 + AluJo SINE Alu 64 299 -13 347 275 56 39 chr20 56684224 56684543 -15469339 - L2 LINE L2 -241 3072 2741 260 200 12 94 chr20 56685234 56685287 -15468595 - MIR SINE MIR 0 262 215 1614 175 0 18 chr20 56685287 56685617 -15468265 - AluJo SINE Alu 0 327 3 260 200 12 94 chr20 56685617 56685646 -15468236 - MIR SINE MIR -47 215 185 251 136 0 68 chr20 56685898 56685957 -15467925 + L1MB3 LINE L1 5445 5499 -835 4100 133 14 21 chr20 56685959 56686154 -15467728 + L1MB3 LINE L1 5482 5677 -506 2247 116 0 0 chr20 56686154 56686465 -15467417 + AluSx SINE Alu 1 311 -1 4100 133 14 21 chr20 56686465 56686974 -15466908 + L1MB3 LINE L1 5677 6181 -2 1857 117 42 3 chr20 56686984 56687267 -15466615 + AluSc SINE Alu 1 294 -15 829 169 0 0 chr20 56687267 56687409 -15466473 + FLAM_C SINE Alu 1 142 -1 402 250 22 11 chr20 56687653 56687745 -15466137 + MIR3 SINE MIR 64 156 -52 2061 129 3 0 chr20 56688346 56688657 -15465225 + AluSx SINE Alu 1 312 0 683 186 31 0 chr20 56688783 56688912 -15464970 - MIR SINE MIR -14 248 116 293 234 107 75 chr20 56688904 56689038 -15464844 + MIR3 SINE MIR 13 150 -67 * 207 0 0 0 chr20 56689209 56689232 -15464650 + (TA)n Simple_repeat Simple_repeat 2 24 0 1748 163 3 23 chr20 56689245 56689546 -15464336 - AluJo SINE Alu -17 295 1 3261 144 22 54 chr20 56689546 56690005 -15463877 - L1MC2 LINE L1 -13 6331 5896 2138 98 24 0 chr20 56690005 56690301 -15463581 - AluSx SINE Alu -9 303 1 3261 144 22 54 chr20 56690301 56690498 -15463384 - L1MC2 LINE L1 -448 5896 5694 225 271 0 0 chr20 56690591 56690639 -15463243 - MIR SINE MIR -61 147 100 471 277 95 7 chr20 56690670 56690818 -15463064 - L2 LINE L2 0 3313 3153 738 318 32 16 chr20 56690827 56691079 -15462803 - MIR SINE MIR 0 262 7 689 308 56 28 chr20 56691537 56691969 -15461913 + L1MC4a LINE L1 5497 5940 -1868 362 275 98 31 chr20 56692036 56692213 -15461669 + MIR SINE MIR 48 247 -15 1386 167 4 12 chr20 56692369 56692615 -15461267 - AluJo SINE Alu -13 299 56 27 29 0 0 chr20 56692648 56692682 -15461200 + AT_rich Low_complexity Low_complexity 1 34 0 320 264 222 14 chr20 56692777 56692921 -15460961 + MER5A DNA MER1_type 16 189 0 1632 179 3 10 chr20 56693063 56693359 -15460523 + AluJb SINE Alu 1 294 -18 427 328 15 0 chr20 56693633 56693767 -15460115 - MIR3 SINE MIR -21 187 52 310 205 167 13 chr20 56693858 56693936 -15459946 + MLT1K LTR MaLR 180 269 -319 810 83 0 255 chr20 56694008 56694244 -15459638 + AluSg/x SINE Alu 130 313 0 261 70 23 0 chr20 56694246 56694289 -15459593 - L1MB2 LINE L1 -7 6164 6121 812 150 0 0 chr20 56694289 56694422 -15459460 - FLAM_C SINE Alu -5 138 6 338 169 0 0 chr20 56694427 56694486 -15459396 - L1MB2 LINE L1 -45 6126 6068 391 268 62 98 chr20 56694489 56694713 -15459169 - Charlie8 DNA MER1_type -2028 389 174 1838 100 0 41 chr20 56694741 56695012 -15458870 - AluSq SINE Alu -18 295 36 364 243 52 104 chr20 56695106 56695291 -15458591 - L1MC4a LINE L1 -1773 6035 5867 1940 149 10 3 chr20 56695291 56695593 -15458289 - AluJo SINE Alu -8 304 1 364 243 52 104 chr20 56695593 56695675 -15458207 - L1MC4a LINE L1 -1941 5867 5782 236 53 26 0 chr20 56695696 56695734 -15458148 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 825 176 0 0 chr20 56695736 56695872 -15458010 - FRAM SINE Alu -31 145 10 480 249 106 73 chr20 56695881 56695954 -15457928 - L1MC4a LINE L1 -2021 5787 5718 3426 99 2 4 chr20 56695954 56696441 -15457441 + L1PA8 LINE L1 5686 6171 -1 480 249 106 73 chr20 56696441 56696640 -15457242 - L1MC4a LINE L1 -2090 5718 5506 2018 137 0 10 chr20 56697084 56697397 -15456485 + AluSx SINE Alu 1 310 -2 480 292 21 14 chr20 56697438 56697582 -15456300 + MIR SINE MIR 31 175 -87 2056 134 0 10 chr20 56697690 56698003 -15455879 + AluSx SINE Alu 1 310 -2 480 292 21 14 chr20 56698044 56698188 -15455694 + MIR SINE MIR 31 175 -87 2519 47 0 0 chr20 56698296 56698594 -15455288 + AluY SINE Alu 1 298 -13 1898 127 0 7 chr20 56698880 56699201 -15454681 + AluSx SINE Alu 1 319 0 276 301 53 15 chr20 56699664 56699797 -15454085 - MLT1I LTR MaLR -267 142 5 2019 105 3 43 chr20 56699845 56700170 -15453712 + AluSq SINE Alu 1 312 -1 846 142 28 0 chr20 56700322 56700463 -15453419 - AluJb SINE Alu -30 282 138 365 326 90 0 chr20 56700520 56700664 -15453218 - MIR SINE MIR -57 205 49 432 0 0 0 chr20 56700791 56700839 -15453043 + (TG)n Simple_repeat Simple_repeat 2 49 0 2060 136 0 0 chr20 56701013 56701323 -15452559 + AluSq SINE Alu 1 310 -3 435 304 50 14 chr20 56701586 56701806 -15452076 - L2 LINE L2 -194 3078 2851 835 288 97 46 chr20 56703336 56703406 -15450476 - MLT1K LTR MaLR -8 580 515 2236 100 3 7 chr20 56703406 56703716 -15450166 + AluSq SINE Alu 1 309 -4 835 288 97 46 chr20 56703716 56704058 -15449824 - MLT1K LTR MaLR -73 515 147 590 179 45 142 chr20 56704124 56704245 -15449637 + L2 LINE L2 2675 2761 -553 2194 105 0 0 chr20 56704245 56704540 -15449342 + AluSx SINE Alu 1 295 -17 590 179 45 142 chr20 56704540 56704664 -15449218 + L2 LINE L2 2761 2896 -418 2123 105 3 0 chr20 56704761 56705056 -15448826 - AluY SINE Alu -15 296 1 1489 287 72 27 chr20 56705057 56705573 -15448309 + MLT1K LTR MaLR 35 573 -15 195 172 35 86 chr20 56705588 56705646 -15448236 + MIR SINE MIR 171 225 -37 1423 254 47 49 chr20 56706711 56707223 -15446659 - MLT1J LTR MaLR 0 511 1 252 0 0 0 chr20 56707400 56707428 -15446454 + (A)n Simple_repeat Simple_repeat 1 28 0 539 184 77 46 chr20 56707516 56707712 -15446170 + L1MC5 LINE L1 7730 7931 -30 4074 179 27 44 chr20 56707866 56707907 -15445975 - L1MB8 LINE L1 -1 6177 6137 2058 125 0 0 chr20 56707907 56708203 -15445679 - AluSg SINE Alu -14 296 1 4074 179 27 44 chr20 56708203 56708640 -15445242 - L1MB8 LINE L1 -41 6137 5694 2563 43 0 0 chr20 56708640 56708945 -15444937 + AluY SINE Alu 2 306 -5 4074 179 27 44 chr20 56708945 56709350 -15444532 - L1MB8 LINE L1 -484 5694 5307 2005 116 7 13 chr20 56709350 56709652 -15444230 - AluSx SINE Alu -12 300 1 4074 179 27 44 chr20 56709652 56709666 -15444216 - L1MB8 LINE L1 -871 5307 5294 4966 212 52 14 chr20 56709684 56710277 -15443605 + L1M4 LINE L1 3999 4568 -1578 2272 70 7 3 chr20 56710277 56710576 -15443306 + AluY SINE Alu 1 300 -11 4966 212 52 14 chr20 56710576 56711248 -15442634 + L1M4 LINE L1 4568 5312 -834 601 143 0 41 chr20 56711249 56711347 -15442535 + AluS SINE Alu 2 95 -218 821 187 29 23 chr20 56711389 56711560 -15442322 + MIR SINE MIR 36 207 -55 372 257 40 30 chr20 56711640 56711741 -15442141 + L2 LINE L2 3212 3313 0 5061 127 23 46 chr20 56711812 56712678 -15441204 + L1MC1 LINE L1 5484 6329 -4 850 267 24 12 chr20 56713091 56713338 -15440544 - MIR SINE MIR -10 252 3 342 258 57 129 chr20 56713372 56713581 -15440301 - MIR SINE MIR -50 212 19 * 569 286 179 0 chr20 56713525 56713693 -15440189 + MIR SINE MIR 15 212 -50 1442 132 0 141 chr20 56713709 56714069 -15439813 + AluSx SINE Alu 1 313 0 2087 78 0 14 chr20 56714084 56714403 -15439479 + AluY SINE Alu 2 316 0 2677 68 17 6 chr20 56714447 56714798 -15439084 - THE1A LTR MaLR 0 355 1 1798 106 40 7 chr20 56714800 56715074 -15438808 + AluSx SINE Alu 23 305 -7 1000 187 0 0 chr20 56715074 56715245 -15438637 + AluSg/x SINE Alu 134 304 -8 657 154 125 7 chr20 56715248 56715384 -15438498 - MER96B DNA MER1_type? -265 152 1 565 302 124 10 chr20 56715505 56716051 -15437831 + L1MC/D LINE L1 5172 5801 -558 814 283 84 44 chr20 56716493 56716921 -15436961 - HERV16 LTR ERVL -3814 1182 738 200 211 35 18 chr20 56716938 56716995 -15436887 + L3 LINE CR1 1436 1493 -84 596 322 5 5 chr20 56716999 56717198 -15436684 + MIR SINE MIR 27 225 -37 2161 113 7 0 chr20 56717268 56717572 -15436310 + AluSx SINE Alu 1 785 0 1085 126 3 20 chr20 56717572 56718051 -15435831 + (GAA)n Simple_repeat Simple_repeat 3 358 0 1057 170 5 62 chr20 56718349 56718573 -15435309 - MER20 DNA MER1_type -6 213 3 190 179 0 89 chr20 56718600 56718656 -15435226 + MIR SINE MIR 135 185 -77 474 18 0 0 chr20 56718656 56718711 -15435171 + (TTCC)n Simple_repeat Simple_repeat 1 55 0 1705 174 0 13 chr20 56718711 56719022 -15434860 - AluJo SINE Alu -5 307 1 279 323 31 8 chr20 56719026 56719153 -15434729 - MIR SINE MIR -12 250 121 939 240 75 102 chr20 56719259 56719701 -15434181 + LTR33A LTR ERVL 87 516 -7 1501 237 108 14 chr20 56719834 56720269 -15433613 - MLT1K LTR MaLR 0 476 1 2306 77 0 0 chr20 56720516 56720814 -15433068 + AluY SINE Alu 1 298 -13 247 305 19 29 chr20 56720834 56720939 -15432943 - L2 LINE L2 -13 3259 3156 257 256 89 126 chr20 56721119 56721163 -15432719 + MLT1J LTR MaLR 73 117 -394 2201 84 7 7 chr20 56721163 56721471 -15432411 + AluY SINE Alu 1 308 -3 257 256 89 126 chr20 56721471 56721557 -15432325 + MLT1J LTR MaLR 117 205 -306 1725 176 0 20 chr20 56721557 56721859 -15432023 - AluJo SINE Alu -16 296 1 257 256 89 126 chr20 56721859 56721973 -15431909 + MLT1J LTR MaLR 205 309 -202 461 202 371 15 chr20 56721979 56722010 -15431872 + L2 LINE L2 1645 1664 -1650 2069 135 0 0 chr20 56722010 56722314 -15431568 - AluSx SINE Alu -8 304 1 461 202 371 15 chr20 56722314 56722549 -15431333 + L2 LINE L2 1664 2006 -1308 371 66 0 49 chr20 56722549 56722610 -15431272 - L1MB3 LINE L1 -12 6171 6114 1668 53 5 0 chr20 56722610 56722818 -15431064 + L1PA6 LINE L1 5939 6147 -7 1894 216 60 31 chr20 56722840 56722947 -15430935 - L1MB7 LINE L1 -58 6126 6024 1813 175 0 0 chr20 56722947 56723250 -15430632 + AluJo SINE Alu 1 303 -9 2096 107 7 0 chr20 56723253 56723731 -15430151 + AluSx SINE Alu 1 312 0 1894 216 60 31 chr20 56723731 56724138 -15429744 - L1MB7 LINE L1 -161 6023 5593 1984 208 79 140 chr20 56724138 56724646 -15429236 + L2 LINE L2 1991 2529 -784 698 132 0 19 chr20 56724646 56724752 -15429130 + FRAM SINE Alu 55 158 -18 1984 208 79 140 chr20 56724752 56724792 -15429090 + L2 LINE L2 2529 2570 -743 1448 162 34 44 chr20 56724792 56724933 -15428949 + AluJo SINE Alu 1 142 -170 2165 114 0 0 chr20 56724933 56725231 -15428651 + AluSq SINE Alu 1 298 -15 1448 162 34 44 chr20 56725231 56725385 -15428497 + AluJo SINE Alu 142 293 -19 1984 208 79 140 chr20 56725385 56725915 -15427967 + L2 LINE L2 2570 3095 -218 1880 156 0 7 chr20 56725915 56726223 -15427659 - AluSx SINE Alu -6 306 1 1984 208 79 140 chr20 56726223 56726396 -15427486 + L2 LINE L2 3095 3277 -36 575 257 82 18 chr20 56726411 56726728 -15427154 - MLT1K LTR MaLR -42 546 158 916 149 61 101 chr20 56727091 56727146 -15426736 - MER20 DNA MER1_type 0 219 163 2314 65 0 19 chr20 56727146 56727454 -15426428 + AluSg SINE Alu 1 302 -8 916 149 61 101 chr20 56727454 56727626 -15426256 - MER20 DNA MER1_type -56 163 1 516 210 32 48 chr20 56727631 56727755 -15426127 + L2 LINE L2 3191 3312 -1 180 313 108 36 chr20 56727767 56727850 -15426032 - L2 LINE L2 -40 3232 3144 1405 185 63 3 chr20 56728097 56728299 -15425583 - AluJo SINE Alu 0 339 112 240 35 0 0 chr20 56728299 56728328 -15425554 + (TTTA)n Simple_repeat Simple_repeat 3 31 0 1405 185 63 3 chr20 56728328 56728447 -15425435 - AluJo SINE Alu -227 112 1 2716 187 38 7 chr20 56728458 56729009 -15424873 - L1MB7 LINE L1 -16 6168 5601 21 36 0 0 chr20 56729174 56729202 -15424680 + AT_rich Low_complexity Low_complexity 1 28 0 330 26 0 0 chr20 56729427 56729466 -15424416 + (GA)n Simple_repeat Simple_repeat 1 39 0 * 333 0 0 0 chr20 56729465 56729502 -15424380 + (TG)n Simple_repeat Simple_repeat 1 37 0 2156 106 0 0 chr20 56729677 56729979 -15423903 + AluSx SINE Alu 1 302 -10 2033 116 0 13 chr20 56730370 56730673 -15423209 + AluSx SINE Alu 1 299 -13 1810 108 0 22 chr20 56730674 56730952 -15422930 + AluY SINE Alu 1 272 -39 405 79 26 26 chr20 56730952 56731028 -15422854 + (GAAA)n Simple_repeat Simple_repeat 3 78 0 207 0 0 0 chr20 56731552 56731575 -15422307 + (T)n Simple_repeat Simple_repeat 1 23 0 217 303 90 25 chr20 56731792 56731914 -15421968 + L2 LINE L2 2368 2497 -817 2368 119 3 0 chr20 56731957 56732268 -15421614 - AluSx SINE Alu 0 312 1 787 224 18 0 chr20 56732284 56732449 -15421433 - FRAM SINE Alu 0 40 1 554 224 30 15 chr20 56732551 56732685 -15421197 - MLT1G LTR MaLR -454 136 1 384 259 9 37 chr20 56732745 56732853 -15421029 + L2 LINE L2 3163 3267 -46 709 245 137 30 chr20 56733040 56733273 -15420609 + MIR SINE MIR 5 262 0 837 126 34 6 chr20 56733317 56733492 -15420390 + CT-rich Low_complexity Low_complexity 1 180 0 2417 102 0 0 chr20 56733497 56733885 -15419997 - AluSx SINE Alu 0 388 1 644 208 8 31 chr20 56733885 56734015 -15419867 - FLAM_A SINE Alu -6 127 1 1410 149 8 4 chr20 56734032 56734267 -15419615 - L1MB7 LINE L1 -10 6174 5939 870 300 21 8 chr20 56734458 56734695 -15419187 - MIR SINE MIR -20 242 3 924 239 115 62 chr20 56734870 56734958 -15418924 + MLT1H1 LTR MaLR 80 162 -393 1704 178 17 13 chr20 56734958 56735256 -15418626 + AluJo SINE Alu 1 299 -13 924 239 115 62 chr20 56735256 56735619 -15418263 + MLT1H1 LTR MaLR 162 555 0 321 327 31 44 chr20 56735746 56735905 -15417977 + LTR67 LTR ERVL 130 286 -271 1517 261 54 19 chr20 56736125 56736604 -15417278 - MLT1J LTR MaLR -12 499 4 1561 205 113 14 chr20 56736661 56737096 -15416786 - MER66A LTR ERV1 0 601 100 1976 111 64 4 chr20 56737257 56737537 -15416345 - AluSx SINE Alu -15 297 1 198 392 0 0 chr20 56737675 56737749 -15416133 + L2 LINE L2 2920 2993 -279 1581 162 120 0 chr20 56737797 56738063 -15415819 - AluJb SINE Alu -14 298 1 1143 163 25 83 chr20 56738126 56738403 -15415479 - MLT1D LTR MaLR -244 261 1 811 212 40 0 chr20 56738404 56738602 -15415280 - LTR16C LTR ERVL -9 482 277 226 282 28 0 chr20 56738659 56738730 -15415152 - LTR16C LTR ERVL -323 168 96 1082 267 107 16 chr20 56738768 56739218 -15414664 + LTR16C LTR ERVL 1 491 0 1430 108 113 9 chr20 56739361 56739574 -15414308 + AluSx SINE Alu 52 286 -26 272 232 24 12 chr20 56739574 56739656 -15414226 + (CATA)n Simple_repeat Simple_repeat 3 85 0 1766 178 3 3 chr20 56739825 56740112 -15413770 + AluJb SINE Alu 1 287 -25 851 186 21 21 chr20 56740172 56740360 -15413522 - MER53 DNA DNA 0 189 2 261 324 0 9 chr20 56740366 56740477 -15413405 + GA-rich Low_complexity Low_complexity 1 110 0 2199 103 0 29 chr20 56740687 56740998 -15412884 + AluSc SINE Alu 1 302 -7 479 244 39 2 chr20 56741000 56741190 -15412692 - MLT1J LTR MaLR -219 292 56 2057 138 10 6 chr20 56741191 56741502 -15412380 - AluJb SINE Alu 0 312 1 2226 122 0 0 chr20 56741513 56741807 -15412075 - AluSx SINE Alu -8 304 11 2381 68 7 14 chr20 56741917 56742212 -15411670 - AluY SINE Alu -6 305 13 521 190 153 44 chr20 56742329 56742466 -15411416 - L2 LINE L2 0 3313 3162 390 162 15 0 chr20 56742479 56742547 -15411335 + MLT1F1 LTR MaLR 41 109 -458 493 219 102 0 chr20 56742551 56742688 -15411194 + MER20B DNA MER1_type 331 481 -302 2270 110 0 3 chr20 56742729 56743029 -15410853 + AluSc SINE Alu 1 299 -10 1316 195 168 0 chr20 56743078 56743411 -15410471 + MLT1F1 LTR MaLR 179 567 0 1026 267 104 18 chr20 56743569 56743955 -15409927 - MER20B DNA MER1_type 0 783 365 1948 160 0 3 chr20 56743964 56744258 -15409624 + AluJo SINE Alu 1 293 -19 357 149 19 36 chr20 56744268 56744483 -15409399 + AluJo SINE Alu 1 285 -17 291 114 0 0 chr20 56744483 56744527 -15409355 + (CATATA)n Simple_repeat Simple_repeat 2 45 0 754 216 181 57 chr20 56744527 56744590 -15409292 - MER20B DNA MER1_type -429 354 300 2322 77 0 11 chr20 56744590 56744904 -15408978 + AluSx SINE Alu 1 311 0 754 216 181 57 chr20 56744904 56745154 -15408728 - MER20B DNA MER1_type -483 300 1 459 262 80 43 chr20 56745193 56745380 -15408502 - L2 LINE L2 -412 2902 2709 216 0 0 0 chr20 56745458 56745482 -15408400 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 343 224 164 33 chr20 56745501 56745653 -15408229 - MLT1H LTR MaLR 0 549 378 1716 169 7 4 chr20 56745722 56746021 -15407861 - AluJb SINE Alu 0 309 10 612 256 33 22 chr20 56746051 56746231 -15407651 - MLT1H LTR MaLR -307 242 61 232 224 149 0 chr20 56746389 56746456 -15407426 - L2 LINE L2 -228 3085 3009 196 128 21 21 chr20 56746928 56746975 -15406907 + CT-rich Low_complexity Low_complexity 5 51 0 393 295 14 45 chr20 56747006 56747315 -15406567 + CT-rich Low_complexity Low_complexity 1 318 -676 1954 116 10 10 chr20 56747315 56747617 -15406265 - AluJo SINE Alu -10 302 1 393 295 14 45 chr20 56747617 56748032 -15405850 + CT-rich Low_complexity Low_complexity 318 994 0 23 78 0 0 chr20 56748190 56748241 -15405641 + GC_rich Low_complexity Low_complexity 1 51 0 30 45 0 0 chr20 56748264 56748308 -15405574 + GC_rich Low_complexity Low_complexity 1 44 0 220 273 23 45 chr20 56748558 56748646 -15405236 - MIR SINE MIR -59 149 64 630 230 8 8 chr20 56748995 56749121 -15404761 + L2 LINE L2 3187 3312 -1 711 271 66 103 chr20 56749207 56749584 -15404298 - L2 LINE L2 -1 3312 2950 2495 72 0 10 chr20 56750646 56750951 -15402931 + AluY SINE Alu 1 302 -9 369 261 352 35 chr20 56751159 56751358 -15402524 + MIR SINE MIR 1 262 0 21 0 0 0 chr20 56751358 56751379 -15402503 + AT_rich Low_complexity Low_complexity 1 21 0 1705 195 0 3 chr20 56751972 56752259 -15401623 + AluJo SINE Alu 1 286 -26 521 235 276 15 chr20 56752406 56752602 -15401280 - MIR SINE MIR -13 249 3 1233 156 14 23 chr20 56752872 56753090 -15400792 - AluJb SINE Alu -12 300 85 469 276 158 24 chr20 56753358 56753604 -15400278 - L2 LINE L2 -1393 1921 1643 2327 107 3 0 chr20 56753825 56754135 -15399747 + AluSx SINE Alu 1 311 -1 384 303 76 0 chr20 56754453 56754572 -15399310 + MIR SINE MIR 108 235 -27 2903 3 0 0 chr20 56754611 56754916 -15398966 - AluY SINE Alu -6 305 1 2527 48 7 0 chr20 56754922 56755212 -15398670 - AluY SINE Alu -19 292 1 2170 326 68 38 chr20 56755873 56756475 -15397407 - L2 LINE L2 -66 3206 2624 1270 182 252 6 chr20 56756475 56756793 -15397089 - MSTD LTR MaLR 0 396 1 2170 326 68 38 chr20 56756793 56757743 -15396139 - L2 LINE L2 -648 2624 1609 1406 235 103 55 chr20 56757749 56758577 -15395305 - L2 LINE L2 -1 3312 2470 324 316 128 53 chr20 56758589 56759174 -15394708 - L2 LINE L2 -1801 1513 885 553 214 32 70 chr20 56759728 56759915 -15393967 + MIR SINE MIR 13 192 -70 208 222 0 0 chr20 56760071 56760121 -15393761 - L2 LINE L2 -12 3260 3227 246 233 21 167 chr20 56760209 56760256 -15393626 - MIR SINE MIR -61 147 95 2422 101 0 0 chr20 56760256 56760563 -15393319 + AluSx SINE Alu 1 307 -5 246 233 21 167 chr20 56760563 56760692 -15393190 - MIR SINE MIR -113 95 2 6064 57 0 3 chr20 56760764 56761515 -15392367 - L1PA8 LINE L1 -11 6161 5413 7195 59 6 36 chr20 56761516 56762497 -15391385 - SVA Other Other -5 1381 430 1720 104 5 57 chr20 56762558 56762943 -15390939 - SVA Other Other -520 866 502 2185 123 0 7 chr20 56762943 56763245 -15390637 - AluSp SINE Alu -13 300 1 869 101 14 0 chr20 56763245 56763384 -15390498 - L1P LINE L1 -725 5429 5289 278 163 0 0 chr20 56763471 56763520 -15390362 + Alu SINE Alu 248 296 -4 618 285 33 19 chr20 56763545 56763759 -15390123 + L2 LINE L2 2553 2769 -545 720 162 7 54 chr20 56763817 56763965 -15389917 - FLAM_C SINE Alu -1 142 2 329 264 210 14 chr20 56764475 56764634 -15389248 + MIR SINE MIR 21 204 -4 1038 189 53 0 chr20 56764860 56765104 -15388778 - L1MA4 LINE L1 -6 6294 6038 279 276 41 8 chr20 56765130 56765253 -15388629 + Charlie8 DNA MER1_type 98 224 -2193 2344 105 7 0 chr20 56765386 56765691 -15388191 - AluSg SINE Alu -3 307 1 21 0 0 0 chr20 56766631 56766652 -15387230 + AT_rich Low_complexity Low_complexity 1 21 0 545 89 0 11 chr20 56766676 56766766 -15387116 + L1MB3 LINE L1 6088 6176 -7 318 216 204 96 chr20 56766779 56766946 -15386936 - L1ME4a LINE L1 -8 6113 5929 835 209 80 59 chr20 56767004 56767120 -15386762 + MIR SINE MIR 19 131 -131 1054 190 32 23 chr20 56767120 56767336 -15386546 + MER20 DNA MER1_type 1 218 -1 835 209 80 59 chr20 56767336 56767458 -15386424 + MIR SINE MIR 131 262 0 780 199 0 0 chr20 56768727 56768863 -15385019 - FLAM_C SINE Alu -2 141 6 1756 102 0 4 chr20 56768892 56769127 -15384755 - AluSq SINE Alu -2 311 78 2827 204 86 3 chr20 56769177 56769780 -15384102 + MER82 DNA MER2_type 1 653 0 301 295 43 72 chr20 56769816 56769955 -15383927 - MIR3 SINE MIR -67 141 7 1087 164 0 0 chr20 56769983 56770154 -15383728 - FRAM SINE Alu -6 170 1 21 0 0 0 chr20 56770206 56770227 -15383655 + AT_rich Low_complexity Low_complexity 1 21 0 372 321 8 0 chr20 56770292 56770426 -15383456 + MER117 DNA MER1_type 63 197 0 381 333 53 29 chr20 56770745 56770916 -15382966 - MIR SINE MIR 0 262 88 1628 147 0 41 chr20 56770916 56771182 -15382700 - AluJb SINE Alu -55 257 3 979 226 9 27 chr20 56771224 56771304 -15382578 + MER58A DNA MER1_type 1 81 -2339 1806 192 41 14 chr20 56771304 56771668 -15382214 - MLT1A2 LTR MaLR 0 374 1 979 226 9 27 chr20 56771668 56771808 -15382074 + MER58A DNA MER1_type 81 217 -7 1713 147 30 40 chr20 56772000 56772299 -15381583 + AluJb SINE Alu 1 296 -16 23 0 0 0 chr20 56772891 56772914 -15380968 + AT_rich Low_complexity Low_complexity 1 23 0 1422 161 89 66 chr20 56772914 56773218 -15380664 - AluJb SINE Alu -1 311 1 1662 127 0 20 chr20 56773220 56773465 -15380417 - AluJo SINE Alu -12 300 61 2163 137 0 3 chr20 56773535 56773834 -15380048 + AluSx SINE Alu 1 298 -14 727 158 79 0 chr20 56773841 56773955 -15379927 + FLAM_C SINE Alu 2 124 -19 1872 148 22 4 chr20 56773997 56774299 -15379583 + AluSx SINE Alu 1 307 0 183 244 154 13 chr20 56775287 56775365 -15378517 - L2 LINE L2 -454 2860 2772 342 274 53 21 chr20 56775371 56775466 -15378416 + L2 LINE L2 3185 3282 -31 526 280 17 30 chr20 56776326 56776502 -15377380 - MER5A DNA MER1_type -1 188 4 583 136 102 157 chr20 56776868 56776931 -15376951 - L1MB8 LINE L1 -2 6176 6111 1841 174 3 7 chr20 56776931 56777230 -15376652 + AluJo SINE Alu 1 298 -14 387 60 0 0 chr20 56777230 56777280 -15376602 + (TA)n Simple_repeat Simple_repeat 2 51 0 583 136 102 157 chr20 56777280 56777450 -15376432 - L1MB8 LINE L1 -65 6113 5955 1769 135 0 4 chr20 56778567 56778826 -15375056 - AluSx SINE Alu -5 307 50 2121 164 0 0 chr20 56779561 56779894 -15373988 - AluJb SINE Alu 0 333 1 278 295 74 0 chr20 56780538 56780633 -15373249 + L2 LINE L2 3206 3307 -6 22 0 0 0 chr20 56781363 56781385 -15372497 + AT_rich Low_complexity Low_complexity 1 22 0 602 280 225 19 chr20 56781444 56781966 -15371916 + L2 LINE L2 2654 3310 -3 858 209 6 6 chr20 56782210 56782368 -15371514 + FRAM SINE Alu 1 158 -8 497 127 0 0 chr20 56782804 56782875 -15371007 + AluS SINE Alu 9 79 -233 2117 114 3 23 chr20 56782991 56783298 -15370584 - AluSx SINE Alu -11 301 1 271 250 113 0 chr20 56783304 56783384 -15370498 + L2 LINE L2 3184 3272 0 544 249 45 93 chr20 56783454 56783723 -15370159 - MLT1J LTR MaLR -151 360 105 548 208 232 0 chr20 56784612 56784819 -15369063 - MIR SINE MIR 0 262 8 787 240 122 80 chr20 56784822 56784856 -15369026 - Charlie8 DNA MER1_type -65 276 245 2509 56 0 20 chr20 56784856 56785160 -15368722 - AluY SINE Alu -13 298 1 787 240 122 80 chr20 56785160 56785578 -15368304 - Charlie8 DNA MER1_type -96 245 1 230 208 19 0 chr20 56785710 56785763 -15368119 - MIR3 SINE MIR -2 206 153 1025 132 0 11 chr20 56785809 56785828 -15368054 + (TCCC)n Simple_repeat Simple_repeat 1 198 0 1025 132 0 11 chr20 56785828 56786010 -15367872 + (TCCC)n Simple_repeat Simple_repeat 1 180 0 1794 150 37 4 chr20 56786042 56786315 -15367567 - AluJb SINE Alu -26 286 5 6656 116 55 58 chr20 56786446 56786902 -15366980 - Tigger3b DNA MER2_type -1797 1231 775 2284 100 3 0 chr20 56786902 56787201 -15366681 - AluSq SINE Alu -13 300 1 6656 116 55 58 chr20 56787201 56787218 -15366664 - Tigger3b DNA MER2_type -2253 775 759 2380 78 0 0 chr20 56787218 56787531 -15366351 + AluSc SINE Alu 1 313 0 6656 116 55 58 chr20 56787531 56788000 -15365882 - Tigger3b DNA MER2_type -2269 759 290 2347 102 7 0 chr20 56788000 56788295 -15365587 + AluSx SINE Alu 1 297 -15 6656 116 55 58 chr20 56788295 56788315 -15365567 - Tigger3b DNA MER2_type -2738 290 271 2313 110 0 3 chr20 56788315 56788624 -15365258 + AluSp SINE Alu 1 308 -5 6656 116 55 58 chr20 56788624 56788889 -15364993 - Tigger3b DNA MER2_type -2757 271 3 308 235 31 0 chr20 56788894 56788992 -15364890 - MER113 DNA MER1_type? -420 101 1 1510 148 126 0 chr20 56789345 56789608 -15364274 + AluJb SINE Alu 1 296 -6 2285 84 7 0 chr20 56790545 56790831 -15363051 + AluSg SINE Alu 1 288 -22 494 213 77 63 chr20 56791223 56791430 -15362452 - MER112 DNA MER1_type -49 211 2 377 209 12 12 chr20 56791588 56791674 -15362208 + L2 LINE L2 3223 3308 -5 230 284 124 16 chr20 56792801 56792995 -15360887 - L1ME4a LINE L1 -98 6023 5809 646 182 57 25 chr20 56793101 56793260 -15360622 - MER106B DNA MER1_type 0 1059 896 1597 202 17 7 chr20 56793262 56793564 -15360318 - AluJb SINE Alu -7 305 1 606 246 127 28 chr20 56793635 56793887 -15359995 - L1ME4a LINE L1 -227 5894 5618 660 169 51 8 chr20 56793902 56794020 -15359862 + FLAM_A SINE Alu 1 123 -10 242 320 45 45 chr20 56794081 56794237 -15359645 - L1ME4a LINE L1 -519 5602 5447 23 42 0 21 chr20 56794383 56794412 -15359470 + AT_rich Low_complexity Low_complexity 1 30 -17 2524 70 0 0 chr20 56794412 56794711 -15359171 - AluY SINE Alu -12 299 1 23 42 0 21 chr20 56794711 56794729 -15359153 + AT_rich Low_complexity Low_complexity 30 47 0 1354 122 235 16 chr20 56794836 56795083 -15358799 - AluSx SINE Alu 0 302 2 1026 173 0 0 chr20 56795385 56795553 -15358329 - AluJb SINE Alu -18 294 127 188 301 203 7 chr20 56796171 56796314 -15357568 + MIR SINE MIR 21 191 -71 2072 146 0 0 chr20 56796451 56796745 -15357137 + AluSx SINE Alu 1 294 -18 2455 67 6 6 chr20 56796747 56797059 -15356823 + AluSq SINE Alu 1 312 -1 2543 55 0 0 chr20 56798040 56798330 -15355552 + AluY SINE Alu 3 292 -19 451 235 118 7 chr20 56798407 56798543 -15355339 + Charlie8 DNA MER1_type 41 191 -2226 536 208 28 0 chr20 56798999 56799105 -15354777 - MER81 DNA DNA -1 113 5 241 314 108 8 chr20 56799273 56799409 -15354473 - MIR SINE MIR -57 151 33 611 229 179 54 chr20 56799737 56800016 -15353866 - L2 LINE L2 -1 3312 2999 2196 99 48 0 chr20 56800537 56800830 -15353052 - AluSx SINE Alu -5 307 1 35 24 0 0 chr20 56800839 56800881 -15353001 + AT_rich Low_complexity Low_complexity 1 42 0 882 181 7 19 chr20 56801610 56801765 -15352117 - FRAM SINE Alu -13 153 1 317 243 201 12 chr20 56801769 56801938 -15351944 - L1M4 LINE L1 -1318 4828 4628 2144 112 0 3 chr20 56801938 56802234 -15351648 + AluSg SINE Alu 1 295 -15 2487 68 0 0 chr20 56802945 56803241 -15350641 + AluY SINE Alu 1 296 -15 379 32 16 48 chr20 56803334 56803396 -15350486 + (TTTTA)n Simple_repeat Simple_repeat 5 64 0 39997 75 7 8 chr20 56803396 56809546 -15344336 - L1PA6 LINE L1 0 6154 11 350 214 130 30 chr20 56809560 56809691 -15344191 - L1MC4 LINE L1 -124 7918 7775 362 314 180 4 chr20 56809853 56810185 -15343697 + L2 LINE L2 2641 3068 -245 798 136 56 0 chr20 56810350 56810475 -15343407 + FLAM_C SINE Alu 1 132 -1 1435 259 51 49 chr20 56810493 56810960 -15342922 - MLT1J LTR MaLR -38 473 6 464 181 218 8 chr20 56812147 56812280 -15341602 - MIR SINE MIR -24 238 78 514 276 95 1 chr20 56812548 56812750 -15341132 - MIR SINE MIR -6 256 37 1820 122 68 14 chr20 56812765 56813043 -15340839 + AluSx SINE Alu 1 293 -19 1695 181 0 17 chr20 56813128 56813420 -15340462 - AluJb SINE Alu -22 290 4 204 328 35 0 chr20 56813944 56814002 -15339880 + L2 LINE L2 3187 3246 -26 244 227 349 38 chr20 56814003 56814135 -15339747 + MER96 DNA MER1_type? 1 173 -2 2324 98 7 0 chr20 56814200 56814506 -15339376 - AluSx SINE Alu -4 308 1 883 254 20 16 chr20 56815423 56815675 -15338207 + MIR SINE MIR 2 254 -8 2289 100 3 0 chr20 56816316 56816606 -15337276 + AluSp SINE Alu 1 291 -22 334 289 44 50 chr20 56816988 56817147 -15336735 + MIR SINE MIR 20 177 -85 360 263 14 75 chr20 56818048 56818261 -15335621 + L1ME4a LINE L1 5636 5835 -286 755 217 101 23 chr20 56818278 56818536 -15335346 + L1MC5 LINE L1 7246 7523 -438 319 260 113 7 chr20 56818633 56818783 -15335099 + L1ME4a LINE L1 5956 6121 0 337 314 209 0 chr20 56818881 56819072 -15334810 + MIR SINE MIR 16 246 -16 1858 146 10 33 chr20 56819179 56819481 -15334401 + AluJo SINE Alu 1 295 -17 664 276 190 11 chr20 56820233 56820606 -15333276 - L2 LINE L2 0 3313 2874 658 282 14 28 chr20 56821498 56821714 -15332168 - MIR SINE MIR -31 231 19 236 198 0 23 chr20 56821734 56821820 -15332062 + MIR SINE MIR 1 184 -78 2165 86 4 7 chr20 56822606 56822884 -15330998 + AluY SINE Alu 15 291 -20 1983 99 25 28 chr20 56822895 56823178 -15330704 + AluSc SINE Alu 15 296 -13 374 184 114 114 chr20 56823299 56823413 -15330469 - L1MB7 LINE L1 -142 6042 5929 25 51 0 0 chr20 56823434 56823473 -15330409 + AT_rich Low_complexity Low_complexity 1 39 0 261 0 0 0 chr20 56823684 56823713 -15330169 + (ATTG)n Simple_repeat Simple_repeat 4 32 0 2093 121 0 0 chr20 56823716 56823989 -15329893 - AluSx SINE Alu -37 275 3 2225 109 0 7 chr20 56824276 56824578 -15329304 - AluSx SINE Alu -12 300 1 2203 116 0 7 chr20 56825374 56825667 -15328215 + AluSg SINE Alu 1 291 -19 195 39 0 0 chr20 56825877 56825885 -15327997 + (TATG)n Simple_repeat Simple_repeat 2 9 -18 2531 69 3 0 chr20 56825885 56826191 -15327691 + AluY SINE Alu 1 307 -4 195 39 0 0 chr20 56826191 56826208 -15327674 + (TATG)n Simple_repeat Simple_repeat 8 27 0 448 275 92 14 chr20 56826441 56826583 -15327299 + MER63A DNA MER1_type 58 210 0 1814 140 77 0 chr20 56827473 56827758 -15326124 - AluSx SINE Alu -5 307 1 249 250 104 0 chr20 56828262 56828358 -15325524 - L1MB3 LINE L1 -267 5916 5811 2042 150 14 17 chr20 56828359 56828383 -15325499 - L1MB2 LINE L1 -7 6164 6141 1680 132 59 30 chr20 56828383 56828687 -15325195 + AluSq SINE Alu 1 313 0 2042 150 14 17 chr20 56828687 56829022 -15324860 - L1MB2 LINE L1 -30 6141 5806 688 175 0 0 chr20 56829023 56829143 -15324739 - AluSp/q SINE Alu -6 307 188 1584 118 0 9 chr20 56829143 56829364 -15324518 - AluSq SINE Alu -94 219 1 2302 109 3 10 chr20 56829373 56829686 -15324196 - AluSx SINE Alu -1 311 1 2260 102 0 0 chr20 56829741 56830054 -15323828 + AluSx SINE Alu 1 313 0 791 108 54 48 chr20 56830444 56830502 -15323380 + L1MB2 LINE L1 6005 6061 -110 1689 124 117 11 chr20 56830502 56830775 -15323107 + AluSx SINE Alu 2 303 -9 791 108 54 48 chr20 56830775 56830882 -15323000 + L1MB2 LINE L1 6061 6171 0 189 107 0 0 chr20 56830908 56830936 -15322946 + (A)n Simple_repeat Simple_repeat 1 28 0 2148 91 36 0 chr20 56830938 56831234 -15322648 + AluSx SINE Alu 1 306 0 2597 74 0 0 chr20 56831875 56832186 -15321696 + AluY SINE Alu 1 311 0 2328 75 7 0 chr20 56832432 56832747 -15321135 + AluSq SINE Alu 1 317 0 280 170 20 90 chr20 56832768 56832868 -15321014 + L1MC5 LINE L1 7837 7929 -32 508 278 95 38 chr20 56832883 56833302 -15320580 - L2 LINE L2 -137 3176 2735 525 107 0 0 chr20 56833322 56833398 -15320484 - Alu SINE Alu -235 76 2 610 243 211 12 chr20 56833399 56833646 -15320236 - L2 LINE L2 -563 2751 2456 2184 128 3 0 chr20 56833709 56834005 -15319877 - AluSq SINE Alu -14 299 3 216 0 0 0 chr20 56834011 56834035 -15319847 + (T)n Simple_repeat Simple_repeat 1 24 0 435 261 25 25 chr20 56834407 56834564 -15319318 + L1ME LINE L1 5516 5672 -449 2377 92 3 0 chr20 56834699 56834992 -15318890 + AluSx SINE Alu 1 294 -18 2183 122 10 0 chr20 56835126 56835420 -15318462 - AluSx SINE Alu -9 303 7 670 153 0 0 chr20 56835786 56835884 -15317998 + AluSg/x SINE Alu 201 298 -14 404 284 116 60 chr20 56836235 56836485 -15317397 - MLT1L LTR MaLR 0 615 352 190 192 58 0 chr20 56836942 56836994 -15316888 - MIR SINE MIR -31 231 177 3350 178 20 40 chr20 56837147 56837806 -15316076 - MER82 DNA MER2_type 0 653 8 452 259 8 30 chr20 56837817 56837948 -15315934 - MIR SINE MIR -109 153 26 195 42 0 0 chr20 56838246 56838270 -15315612 + (TG)n Simple_repeat Simple_repeat 1 24 0 183 42 0 0 chr20 56838915 56838939 -15314943 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 505 264 81 17 chr20 56839134 56839308 -15314574 - MIR SINE MIR -1 261 77 599 273 38 0 chr20 56839417 56839600 -15314282 + MIR SINE MIR 67 256 -6 777 197 0 0 chr20 56841063 56841195 -15312687 + FLAM_C SINE Alu 2 133 -10 2070 146 7 0 chr20 56841522 56841831 -15312051 - AluSx SINE Alu -1 311 1 413 277 159 62 chr20 56841832 56842343 -15311539 - L1ME4a LINE L1 -286 5835 5283 21 0 0 0 chr20 56842345 56842366 -15311516 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr20 56842462 56842483 -15311399 + AT_rich Low_complexity Low_complexity 1 21 0 325 198 176 44 chr20 56842561 56842652 -15311230 - L1ME LINE L1 -507 5614 5512 27 0 0 0 chr20 56843498 56843525 -15310357 + AT_rich Low_complexity Low_complexity 1 27 0 283 203 54 14 chr20 56844255 56844329 -15309553 - L1ME LINE L1 -247 5874 5798 2350 96 3 10 chr20 56844640 56844954 -15308928 - AluSx SINE Alu 0 312 1 245 192 39 62 chr20 56845607 56845737 -15308145 + (CATATA)n Simple_repeat Simple_repeat 5 131 0 734 300 85 13 chr20 56845779 56846096 -15307786 - L1MC4a LINE L1 -1925 5883 5544 260 211 60 45 chr20 56846129 56846262 -15307620 - L1MC4a LINE L1 -2381 5427 5293 371 268 173 30 chr20 56846395 56846563 -15307319 - MIR SINE MIR -31 231 40 2067 149 0 0 chr20 56846860 56847162 -15306720 - AluJo SINE Alu -8 304 3 22 0 0 0 chr20 56847471 56847493 -15306389 + AT_rich Low_complexity Low_complexity 1 22 0 865 158 0 0 chr20 56847538 56847671 -15306211 + FLAM_C SINE Alu 1 133 0 21 57 0 0 chr20 56847671 56847706 -15306176 + AT_rich Low_complexity Low_complexity 1 35 0 401 205 75 37 chr20 56847916 56847984 -15305898 - LTR50 LTR ERVL -13 782 718 2217 97 13 10 chr20 56847984 56848282 -15305600 + AluSg SINE Alu 1 299 -11 2133 104 13 26 chr20 56848287 56848595 -15305287 + AluSx SINE Alu 1 304 -8 401 205 75 37 chr20 56848595 56848681 -15305201 - LTR50 LTR ERVL -80 715 616 768 110 0 90 chr20 56848696 56848860 -15305022 + FLAM_C SINE Alu 1 133 0 548 285 129 50 chr20 56848991 56849252 -15304630 + L2 LINE L2 2976 3266 -47 801 164 8 0 chr20 56849252 56849380 -15304502 + FLAM_C SINE Alu 1 129 -4 548 285 129 50 chr20 56849380 56849420 -15304462 + L2 LINE L2 3266 3301 -12 787 209 52 57 chr20 56849658 56849868 -15304014 - MER63A DNA MER1_type -1 209 1 2886 13 0 0 chr20 56849945 56850256 -15303626 - AluY SINE Alu 0 311 1 1765 182 0 38 chr20 56850373 56850691 -15303191 - AluJb SINE Alu -6 306 1 474 264 102 59 chr20 56850755 56851058 -15302824 - MER102b DNA MER1_type 0 341 26 2141 87 22 4 chr20 56851136 56851434 -15302448 + AluSg SINE Alu 1 303 0 235 353 15 37 chr20 56851448 56851584 -15302298 - Tigger8 DNA MER2_type -438 228 96 2221 115 0 26 chr20 56852110 56852423 -15301459 + AluSx SINE Alu 1 305 -7 1727 150 41 24 chr20 56852471 56852765 -15301117 + AluJo SINE Alu 1 299 -13 2192 143 0 0 chr20 56853003 56853304 -15300578 - AluSx SINE Alu -11 301 1 1284 99 0 6 chr20 56853492 56853664 -15300218 - AluSc SINE Alu 0 309 139 626 95 0 0 chr20 56853666 56853750 -15300132 - AluY SINE Alu -233 85 2 2016 132 10 0 chr20 56853833 56854121 -15299761 + AluJb SINE Alu 1 291 -21 1670 182 14 10 chr20 56854264 56854398 -15299484 + AluJo SINE Alu 1 133 -179 2321 75 20 0 chr20 56854398 56854690 -15299192 + AluSp SINE Alu 1 298 -15 1670 182 14 10 chr20 56854690 56854846 -15299036 + AluJo SINE Alu 133 292 -20 638 283 71 32 chr20 56855674 56856013 -15297869 + L1ME LINE L1 5471 5822 -299 2237 111 0 3 chr20 56856014 56856311 -15297571 - AluSx SINE Alu -16 296 1 2262 99 10 7 chr20 56856321 56856623 -15297259 - AluSg SINE Alu -7 303 1 809 120 0 0 chr20 56856745 56856862 -15297020 - FLAM_A SINE Alu -10 132 16 2278 87 24 0 chr20 56857135 56857424 -15296458 + AluSq SINE Alu 1 296 -17 532 176 82 82 chr20 56857536 56857639 -15296243 - MIR SINE MIR -11 251 146 2057 156 10 0 chr20 56857639 56857947 -15295935 - AluSx SINE Alu -1 311 1 532 176 82 82 chr20 56857947 56858025 -15295857 - MIR SINE MIR -115 147 70 1811 141 3 17 chr20 56858065 56858362 -15295520 + AluJb SINE Alu 14 306 -6 773 184 7 13 chr20 56858654 56858806 -15295076 - MER105 DNA DNA -53 151 1 2046 141 3 3 chr20 56859013 56859311 -15294571 - AluJb SINE Alu -14 298 1 1748 148 10 24 chr20 56863344 56863642 -15290240 - AluJb SINE Alu -13 299 6 721 176 0 46 chr20 56863836 56863967 -15289915 - FLAM_C SINE Alu -8 125 1 1343 162 58 4 chr20 56863999 56864240 -15289642 + AluJo SINE Alu 51 304 -8 412 200 0 13 chr20 56864491 56864566 -15289316 - FRAM/FAM SINE Alu -111 65 1 464 206 10 20 chr20 56864673 56864775 -15289107 - AluJb SINE Alu -19 293 193 1763 153 0 33 chr20 56865026 56865326 -15288556 - AluJo SINE Alu -22 290 1 2048 135 10 26 chr20 56865380 56865691 -15288191 + AluSx SINE Alu 1 306 -6 1108 86 0 0 chr20 56865697 56865836 -15288046 - AluSq/x SINE Alu -174 139 1 764 134 18 0 chr20 56866021 56866133 -15287749 + AluJb SINE Alu 2 115 -197 367 202 131 89 chr20 56866239 56866407 -15287475 - MIR SINE MIR -75 187 13 694 154 8 0 chr20 56866417 56866534 -15287348 + FLAM_C SINE Alu 1 118 -25 29 0 0 0 chr20 56866534 56866563 -15287319 + AT_rich Low_complexity Low_complexity 1 29 0 2054 142 0 0 chr20 56866563 56866851 -15287031 - AluSx SINE Alu -24 288 1 1560 284 115 10 chr20 56867059 56867668 -15286214 - MER115 DNA AcHobo -11 682 10 1830 104 0 0 chr20 56867743 56867974 -15285908 + AluSx SINE Alu 1 231 -81 687 136 0 0 chr20 56867975 56868078 -15285804 + FLAM_C SINE Alu 23 125 -18 44 20 0 0 chr20 56868078 56868129 -15285753 + AT_rich Low_complexity Low_complexity 1 51 0 1659 116 5 0 chr20 56868207 56868423 -15285459 - AluSg/x SINE Alu -19 293 77 2250 98 17 7 chr20 56868467 56868763 -15285119 + AluSx SINE Alu 1 299 -13 2164 107 13 23 chr20 56869019 56869318 -15284564 - AluSx SINE Alu -16 296 1 2555 64 0 0 chr20 56869829 56870125 -15283757 + AluY SINE Alu 1 296 -15 2327 91 10 3 chr20 56870264 56870571 -15283311 - AluSc SINE Alu 0 309 1 285 139 167 42 chr20 56870632 56870704 -15283178 - L2 LINE L2 -1 3312 3232 2310 86 17 0 chr20 56870753 56871044 -15282838 - AluSp SINE Alu -17 296 1 1789 141 25 7 chr20 56871046 56871322 -15282560 + AluJo SINE Alu 28 308 -4 2186 112 0 26 chr20 56871327 56871639 -15282243 + AluSg SINE Alu 1 304 -6 803 188 74 0 chr20 56871780 56871956 -15281926 - MER53 DNA DNA 0 189 1 598 254 92 36 chr20 56871979 56872259 -15281623 - L2 LINE L2 -234 3079 2784 657 106 0 0 chr20 56872281 56872375 -15281507 + AluS SINE Alu 2 95 -217 610 301 6 0 chr20 56873533 56873716 -15280166 + MIR SINE MIR 12 195 -67 1766 77 0 34 chr20 56873943 56874218 -15279664 - AluSg/x SINE Alu 0 350 84 422 287 103 31 chr20 56874219 56874442 -15279440 + L2 LINE L2 3051 3289 -24 284 271 164 16 chr20 56874767 56874889 -15278993 - L2 LINE L2 -1 3312 3173 333 285 161 10 chr20 56874931 56875176 -15278706 - L2 LINE L2 -264 3049 2761 1243 169 24 10 chr20 56875692 56875899 -15277983 - AluJo SINE Alu -102 210 1 1525 165 8 12 chr20 56876200 56876454 -15277428 + AluJb SINE Alu 36 288 -24 326 42 21 0 chr20 56876605 56876653 -15277229 + (TTTTA)n Simple_repeat Simple_repeat 2 50 0 1502 159 0 63 chr20 56876655 56876804 -15277078 - AluJb SINE Alu -30 282 160 2389 80 0 46 chr20 56876804 56877129 -15276753 - AluSq SINE Alu -3 310 1 1502 159 0 63 chr20 56877129 56877280 -15276602 - AluJb SINE Alu -152 160 1 684 234 95 95 chr20 56877410 56877682 -15276200 - L2 LINE L2 -11 3302 3028 2028 117 10 7 chr20 56877682 56877972 -15275910 + AluSx SINE Alu 1 291 -21 684 234 95 95 chr20 56877972 56878100 -15275782 - L2 LINE L2 -284 3029 2902 1889 169 7 0 chr20 56878119 56878414 -15275468 - AluJo SINE Alu -15 297 1 371 222 119 32 chr20 56878629 56878755 -15275127 - L2 LINE L2 -5 3308 3172 204 211 105 26 chr20 56878916 56878992 -15274890 - L2 LINE L2 -400 2914 2833 225 0 0 0 chr20 56879032 56879057 -15274825 + (TGG)n Simple_repeat Simple_repeat 1 25 0 1073 171 179 12 chr20 56879059 56879305 -15274577 - AluJo SINE Alu -15 287 1 654 195 0 18 chr20 56879452 56879565 -15274317 + FLAM_A SINE Alu 6 116 -26 216 0 0 0 chr20 56879566 56879590 -15274292 + (T)n Simple_repeat Simple_repeat 1 24 0 2256 106 26 0 chr20 56879766 56880069 -15273813 - AluSq SINE Alu -2 311 1 1088 125 6 6 chr20 56880208 56880368 -15273514 - AluJo SINE Alu -113 199 40 252 186 43 43 chr20 56880415 56880485 -15273397 + MER103 DNA DNA 83 152 -14 995 181 126 28 chr20 56881466 56881720 -15272162 - MER46C DNA MER2_type -30 308 30 1823 169 0 7 chr20 56881855 56882151 -15271731 + AluJb SINE Alu 3 296 -16 488 208 31 50 chr20 56882518 56882531 -15271351 - L1MB8 LINE L1 0 6184 6172 2143 103 17 0 chr20 56882531 56882822 -15271060 - AluSx SINE Alu -16 296 1 488 208 31 50 chr20 56882822 56882985 -15270897 - L1MB8 LINE L1 -12 6172 6012 971 104 203 15 chr20 56883162 56883266 -15270616 - L1MA8 LINE L1 -5 6286 6203 360 0 0 0 chr20 56883266 56883306 -15270576 + (TG)n Simple_repeat Simple_repeat 1 40 0 971 104 203 15 chr20 56883306 56883403 -15270479 - L1MA8 LINE L1 -88 6203 6047 962 106 0 0 chr20 56883462 56883585 -15270297 + AluJb SINE Alu 1 123 -189 1484 147 12 92 chr20 56883873 56884059 -15269823 - AluJb SINE Alu -12 300 149 2302 103 0 0 chr20 56884059 56884350 -15269532 - AluSq SINE Alu -22 291 1 1111 165 9 27 chr20 56884350 56884489 -15269393 - AluJo SINE Alu -177 135 1 1484 147 12 92 chr20 56884350 56884489 -15269393 - AluJb SINE Alu -163 149 1 23 0 0 0 chr20 56885043 56885066 -15268816 + AT_rich Low_complexity Low_complexity 1 23 0 2541 51 0 0 chr20 56885268 56885563 -15268319 + AluY SINE Alu 1 295 -16 587 268 72 78 chr20 56885774 56886016 -15267866 - MER102b DNA MER1_type -1098 330 88 2165 99 0 10 chr20 56886016 56886309 -15267573 + AluSc SINE Alu 1 290 -19 587 268 72 78 chr20 56886309 56886322 -15267560 - MER102b DNA MER1_type -1340 88 76 1822 178 3 0 chr20 56886322 56886620 -15267262 + AluJo SINE Alu 1 299 -13 2232 100 17 0 chr20 56886620 56886910 -15266972 + AluSc SINE Alu 1 295 -14 2142 132 0 0 chr20 56886912 56887208 -15266674 + AluSx SINE Alu 1 296 -16 587 268 72 78 chr20 56887208 56887268 -15266614 - MER102b DNA MER1_type -1352 76 12 2528 60 0 0 chr20 56887586 56887888 -15265994 - AluY SINE Alu -7 304 3 22 0 0 54 chr20 56887891 56887905 -15265977 + AT_rich Low_complexity Low_complexity 1 14 -21 2194 78 7 4 chr20 56887905 56888220 -15265662 - AluY SINE Alu 0 317 2 22 0 0 54 chr20 56888220 56888241 -15265641 + AT_rich Low_complexity Low_complexity 14 35 0 285 176 39 0 chr20 56889039 56889090 -15264792 + MIR SINE MIR 77 129 -133 25 31 0 0 chr20 56889131 56889163 -15264719 + AT_rich Low_complexity Low_complexity 1 32 0 29 47 0 0 chr20 56889528 56889571 -15264311 + AT_rich Low_complexity Low_complexity 1 43 0 1016 139 0 14 chr20 56889840 56889984 -15263898 + FRAM SINE Alu 13 154 -22 1203 138 128 10 chr20 56890420 56890616 -15263266 + MER20 DNA MER1_type 1 219 0 1569 194 0 11 chr20 56890846 56891130 -15262752 + AluJb SINE Alu 1 281 -31 1454 174 32 42 chr20 56891291 56891601 -15262281 + AluJb SINE Alu 1 307 -5 1673 144 15 4 chr20 56891732 56891995 -15261887 - AluSx SINE Alu -3 309 44 2423 91 7 0 chr20 56892005 56892312 -15261570 - AluSq SINE Alu -4 309 1 2355 105 0 10 chr20 56893165 56893478 -15260404 + AluSx SINE Alu 1 310 -2 26 0 0 0 chr20 56893719 56893745 -15260137 + AT_rich Low_complexity Low_complexity 1 26 0 443 238 151 27 chr20 56893818 56894003 -15259879 - L1MC5 LINE L1 -45 7916 7709 25 31 0 0 chr20 56894037 56894069 -15259813 + AT_rich Low_complexity Low_complexity 1 32 0 1126 161 65 130 chr20 56894149 56894472 -15259410 - AluJo SINE Alu 0 302 1 256 247 82 0 chr20 56894481 56894554 -15259328 + L1ME LINE L1 5696 5774 -347 2324 80 0 35 chr20 56894725 56895037 -15258845 + AluY SINE Alu 1 301 -10 1594 173 0 36 chr20 56897067 56897374 -15256508 + AluJo SINE Alu 1 296 -16 1378 160 35 64 chr20 56897928 56898129 -15255753 - AluJo SINE Alu -38 274 82 2011 51 113 25 chr20 56898129 56898404 -15255478 + AluY SINE Alu 1 299 -12 1378 160 35 64 chr20 56898404 56898484 -15255398 - AluJo SINE Alu -230 82 1 1844 163 0 7 chr20 56899440 56899729 -15254153 - AluJb SINE Alu -23 289 3 1736 191 3 3 chr20 56899910 56900204 -15253678 - AluJo SINE Alu -18 294 1 1345 201 16 0 chr20 56900351 56900595 -15253287 + AluJb SINE Alu 1 248 -64 378 0 0 0 chr20 56900595 56900637 -15253245 + (TG)n Simple_repeat Simple_repeat 2 43 0 853 97 14 97 chr20 56900643 56900788 -15253094 - FLAM_C SINE Alu 0 133 1 2009 139 7 0 chr20 56902256 56902544 -15251338 - AluSx SINE Alu -17 295 6 2246 82 7 0 chr20 56902584 56902904 -15250978 - AluSp SINE Alu 0 322 1 2165 136 0 3 chr20 56902939 56903249 -15250633 - AluSx SINE Alu -3 309 1 2280 113 0 0 chr20 56903569 56903878 -15250004 - AluSx SINE Alu -3 309 1 2303 93 0 0 chr20 56904142 56904433 -15249449 + AluSg SINE Alu 1 291 -19 367 261 75 37 chr20 56904503 56904664 -15249218 - L1MC5 LINE L1 -37 7924 7758 280 200 93 111 chr20 56905134 56905319 -15248563 - L1MC5 LINE L1 -290 7671 7489 2049 132 0 3 chr20 56905319 56905607 -15248275 - AluSx SINE Alu -21 291 5 280 200 93 111 chr20 56905607 56905646 -15248236 - L1MC5 LINE L1 -472 7489 7451 2165 110 3 3 chr20 56905647 56905946 -15247936 - AluSx SINE Alu -13 299 1 899 222 128 5 chr20 56906036 56906216 -15247666 + MER8 DNA MER2_type 7 216 -23 1924 141 22 0 chr20 56906216 56906486 -15247396 + AluSx SINE Alu 1 276 -36 899 222 128 5 chr20 56906486 56906508 -15247374 + MER8 DNA MER2_type 216 234 -5 234 81 0 0 chr20 56906665 56906702 -15247180 + (T)n Simple_repeat Simple_repeat 1 37 0 709 96 0 0 chr20 56906702 56906796 -15247086 - AluY SINE Alu -82 229 136 2185 90 31 0 chr20 56906904 56907194 -15246688 - AluSp SINE Alu -14 299 1 765 253 0 19 chr20 56907201 56907359 -15246523 - FRAM SINE Alu -11 155 1 2233 115 3 6 chr20 56907390 56907704 -15246178 - AluSq SINE Alu 0 313 1 1077 131 6 6 chr20 56907706 56907866 -15246016 - FRAM SINE Alu -16 160 1 625 178 117 17 chr20 56907938 56908118 -15245764 - L1MC/D LINE L1 -2333 5475 5278 263 176 0 0 chr20 56908507 56908558 -15245324 - Alu SINE Alu -3 298 248 1431 104 40 0 chr20 56908660 56908862 -15245020 - AluSq SINE Alu -103 210 1 2091 79 9 61 chr20 56908911 56909239 -15244643 - AluY SINE Alu 0 311 1 1006 169 0 6 chr20 56909239 56909399 -15244483 - FRAM SINE Alu -4 162 4 2308 87 16 10 chr20 56909431 56909740 -15244142 - AluY SINE Alu 0 311 1 1038 192 0 56 chr20 56909771 56909985 -15243897 - AluJo SINE Alu -108 204 3 2250 103 23 0 chr20 56911981 56912283 -15241599 - AluSx SINE Alu -3 309 1 203 313 75 0 chr20 56912561 56912641 -15241241 + L2 LINE L2 3201 3286 -27 2453 85 3 0 chr20 56912778 56913083 -15240799 - AluSp SINE Alu -7 306 1 2038 127 9 19 chr20 56913758 56914073 -15239809 - AluSx SINE Alu 0 312 1 267 175 79 0 chr20 56914738 56914801 -15239081 - L1ME4a LINE L1 0 6121 6054 32 0 0 23 chr20 56916235 56916262 -15237620 + AT_rich Low_complexity Low_complexity 1 28 -14 1462 179 31 34 chr20 56916262 56916553 -15237329 + AluJo SINE Alu 1 290 -22 32 0 0 23 chr20 56916553 56916568 -15237314 + AT_rich Low_complexity Low_complexity 28 42 0 2378 85 7 0 chr20 56916694 56916989 -15236893 + AluSq SINE Alu 1 297 -16 1837 166 0 10 chr20 56917559 56917861 -15236021 + AluJb SINE Alu 1 299 -13 1611 184 46 0 chr20 56917870 56918153 -15235729 + AluJb SINE Alu 1 296 -16 793 152 40 0 chr20 56918713 56918838 -15235044 + AluJo SINE Alu 1 130 -172 2082 45 0 56 chr20 56918980 56919247 -15234635 + L1PA6 LINE L1 5902 6153 -1 315 151 94 0 chr20 56919279 56919332 -15234550 - U6 snRNA snRNA -49 58 1 460 258 15 23 chr20 56919619 56919751 -15234131 + L1ME LINE L1 5523 5653 -468 240 35 0 0 chr20 56919983 56920012 -15233870 + (T)n Simple_repeat Simple_repeat 1 29 0 2343 108 0 0 chr20 56920053 56920358 -15233524 + AluSq SINE Alu 1 305 -8 1655 150 52 11 chr20 56921733 56922020 -15231862 - AluJo SINE Alu 0 312 14 501 205 262 16 chr20 56922165 56922287 -15231595 + AluJo SINE Alu 137 288 -14 576 241 165 8 chr20 56922341 56922578 -15231304 - L1MC5 LINE L1 -44 7917 7644 2148 113 0 23 chr20 56924001 56924303 -15229579 - AluSg SINE Alu -13 297 3 2391 88 10 0 chr20 56924357 56924663 -15229219 - AluSg SINE Alu -1 309 1 378 0 0 0 chr20 56924741 56924783 -15229099 + (TTG)n Simple_repeat Simple_repeat 1 42 0 576 274 101 9 chr20 56925333 56925552 -15228330 + MIR SINE MIR 5 243 -19 2183 110 10 3 chr20 56925827 56926128 -15227754 - AluSx SINE Alu -9 303 1 30 27 0 0 chr20 56926172 56926209 -15227673 + AT_rich Low_complexity Low_complexity 1 37 0 1477 111 9 26 chr20 56926628 56926854 -15227028 - AluSg/x SINE Alu -7 303 82 1882 137 0 11 chr20 56926880 56927218 -15226664 - AluSx SINE Alu 0 335 1 1279 148 5 5 chr20 56927218 56927427 -15226455 + Tigger5 DNA MER2_type 2115 2323 0 351 161 108 43 chr20 56928417 56928510 -15225372 - MIR SINE MIR -158 104 6 424 222 299 7 chr20 56929945 56930089 -15223793 + MER5A DNA MER1_type 1 186 -3 1293 171 61 41 chr20 56931122 56931415 -15222467 + AluJb SINE Alu 1 299 -13 1935 139 17 0 chr20 56931432 56931726 -15222156 + AluSq SINE Alu 1 299 -14 498 163 0 0 chr20 56931817 56931897 -15221985 - AluSq SINE Alu -14 299 220 841 116 58 22 chr20 56931897 56932035 -15221847 - AluSq SINE Alu -126 187 45 1236 181 26 69 chr20 56932559 56932862 -15221020 - AluJo SINE Alu -22 290 1 1020 206 102 39 chr20 56933475 56933725 -15220157 + L1MC4 LINE L1 6477 6847 -1046 2248 100 3 13 chr20 56933725 56934026 -15219856 + AluSg SINE Alu 1 298 -12 1020 206 102 39 chr20 56934026 56934116 -15219766 + L1MC4 LINE L1 6847 6930 -963 3168 179 124 37 chr20 56934124 56934295 -15219587 + L1MB3 LINE L1 4616 4771 -1412 1459 113 158 45 chr20 56934295 56934560 -15219322 + AluJb SINE Alu 1 295 -17 2858 9 0 36 chr20 56934560 56934889 -15218993 + AluYb8 SINE Alu 1 317 -1 3168 179 124 37 chr20 56934889 56934906 -15218976 + L1MB3 LINE L1 4771 4785 -1398 432 0 0 0 chr20 56934906 56934954 -15218928 + (CA)n Simple_repeat Simple_repeat 2 49 0 3168 179 124 37 chr20 56934954 56935712 -15218170 + L1MB3 LINE L1 4785 5476 -707 2245 98 7 0 chr20 56935712 56936007 -15217875 + AluSq SINE Alu 1 297 -16 3168 179 124 37 chr20 56936007 56936111 -15217771 + L1MB3 LINE L1 5476 5570 -613 2132 137 0 0 chr20 56936111 56936404 -15217478 - AluSx SINE Alu -19 293 1 3168 179 124 37 chr20 56936404 56936755 -15217127 + L1MB3 LINE L1 5570 6137 -46 1166 172 54 0 chr20 56936756 56936960 -15216922 + AluJo SINE Alu 86 300 -12 226 309 178 20 chr20 56937018 56937718 -15216164 + L1MC4a LINE L1 6921 7651 -157 27 0 0 0 chr20 56937827 56937854 -15216028 + AT_rich Low_complexity Low_complexity 1 27 0 1527 192 31 11 chr20 56937861 56938148 -15215734 + AluJo SINE Alu 1 293 -19 645 205 31 0 chr20 56938171 56938298 -15215584 + FLAM_C SINE Alu 2 132 -1 2159 119 10 13 chr20 56938345 56938656 -15215226 + AluSx SINE Alu 1 310 -2 2573 47 0 3 chr20 56938777 56939075 -15214807 - AluY SINE Alu -14 297 1 298 293 152 7 chr20 56941448 56941718 -15212164 + L1MC4a LINE L1 5857 6165 -1643 2174 107 0 10 chr20 56941720 56942019 -15211863 - AluSg1 SINE Alu -13 296 1 27 29 0 0 chr20 56942431 56942465 -15211417 + AT_rich Low_complexity Low_complexity 1 34 0 934 123 0 0 chr20 56942588 56942718 -15211164 - FLAM_C SINE Alu -3 130 1 2060 111 10 14 chr20 56942762 56943050 -15210832 - AluSx SINE Alu -21 291 5 1452 153 121 14 chr20 56945595 56945877 -15208005 - AluJb SINE Alu 0 312 1 1920 193 85 126 chr20 56946688 56947208 -15206674 - MER63C DNA MER1_type -165 895 355 1888 135 59 14 chr20 56947208 56947496 -15206386 - AluSx SINE Alu -11 301 1 1920 193 85 126 chr20 56947496 56947543 -15206339 - MER63C DNA MER1_type -705 355 308 2191 85 0 14 chr20 56947543 56947826 -15206056 + AluSx SINE Alu 1 279 -33 1920 193 85 126 chr20 56947826 56948256 -15205626 - MER63C DNA MER1_type -752 308 2 262 318 19 37 chr20 56948358 56948465 -15205417 + MIR SINE MIR 46 150 -112 2167 99 0 3 chr20 56949054 56949375 -15204507 + AluSg SINE Alu 1 320 0 279 207 134 0 chr20 56950146 56950228 -15203654 + L1MC4 LINE L1 5840 5932 -1876 394 220 114 151 chr20 56951414 56951665 -15202217 + L1MC4a LINE L1 5798 6057 -1751 2146 140 0 3 chr20 56951665 56951973 -15201909 + AluSx SINE Alu 1 307 -5 2427 42 18 7 chr20 56951983 56952266 -15201616 + AluY SINE Alu 1 286 -25 394 220 114 151 chr20 56952266 56952440 -15201442 + L1MC4a LINE L1 6066 6218 -1590 611 250 48 9 chr20 56952468 56952696 -15201186 + L1M4 LINE L1 4989 5225 -921 1840 167 3 22 chr20 56952698 56953016 -15200866 + AluJo SINE Alu 1 312 0 635 213 161 75 chr20 56953045 56953491 -15200391 + L1M4 LINE L1 4676 5169 -977 2441 80 6 3 chr20 56953491 56953802 -15200080 + AluSq SINE Alu 1 312 -1 635 213 161 75 chr20 56953802 56953838 -15200044 + L1M4 LINE L1 5169 5200 -946 2115 145 0 0 chr20 56953842 56954146 -15199736 + AluSx SINE Alu 1 304 -8 1745 156 3 26 chr20 56954148 56954286 -15199596 + AluJb SINE Alu 1 141 -171 2471 81 3 0 chr20 56954286 56954593 -15199289 + AluSp SINE Alu 1 308 -5 1745 156 3 26 chr20 56954593 56954762 -15199120 + AluJb SINE Alu 141 301 -11 685 218 33 126 chr20 56954777 56955048 -15198834 + L1MC4 LINE L1 6695 6940 -1102 244 118 0 0 chr20 56955071 56955105 -15198777 + Alu SINE Alu 2 35 -268 * 309 108 0 8 chr20 56955089 56955143 -15198739 + AluSp/q SINE Alu 251 293 -10 3170 215 78 36 chr20 56955148 56955699 -15198183 + L1ME1 LINE L1 4898 5424 -742 1638 112 0 0 chr20 56955699 56955922 -15197960 - AluSg/x SINE Alu -5 305 83 3170 215 78 36 chr20 56955922 56956049 -15197833 + L1ME1 LINE L1 5424 5544 -622 2134 108 34 3 chr20 56956049 56956346 -15197536 - AluSx SINE Alu -6 306 1 3170 215 78 36 chr20 56956346 56956885 -15196997 + L1ME1 LINE L1 5544 6160 -6 586 242 208 35 chr20 56956904 56957164 -15196718 + L1MC4 LINE L1 6913 7217 -825 346 120 0 0 chr20 56957174 56957224 -15196658 + Alu SINE Alu 1 50 -249 1120 103 14 0 chr20 56957224 56957370 -15196512 + AluSg/x SINE Alu 149 296 -16 2024 200 43 76 chr20 56957454 56957979 -15195903 + L1MC4 LINE L1 7419 7921 -121 2376 106 0 0 chr20 56957979 56958280 -15195602 + AluSx SINE Alu 1 301 -11 2024 200 43 76 chr20 56958280 56958399 -15195483 + L1MC4 LINE L1 7921 8042 0 2057 141 0 0 chr20 56958895 56959203 -15194679 + AluSq SINE Alu 1 308 0 196 271 0 0 chr20 56959319 56959367 -15194515 - L2 LINE L2 -1 3312 3265 2306 100 7 0 chr20 56960568 56960868 -15193014 + AluSp SINE Alu 1 302 -11 1521 131 6 131 chr20 56962397 56962732 -15191150 + AluJb SINE Alu 1 293 -19 2384 69 7 0 chr20 56963123 56963411 -15190471 - AluSg SINE Alu -19 291 2 561 227 34 45 chr20 56963435 56963611 -15190271 + FAM SINE Alu 1 174 -1 2070 117 0 45 chr20 56964089 56964398 -15189484 - AluSq SINE Alu -18 295 1 1420 194 17 27 chr20 56964421 56964714 -15189168 + AluJo SINE Alu 1 290 -12 1699 176 14 7 chr20 56964922 56965218 -15188664 - AluJo SINE Alu -14 298 1 2905 192 90 48 chr20 56965421 56965861 -15188021 + L1MB4 LINE L1 4897 5317 -863 2295 111 0 3 chr20 56965861 56966158 -15187724 + AluSq SINE Alu 1 296 -17 2905 192 90 48 chr20 56966158 56966328 -15187554 + L1MB4 LINE L1 5317 5478 -702 2381 57 32 0 chr20 56966328 56966608 -15187274 + AluSx SINE Alu 7 295 -17 2905 192 90 48 chr20 56966608 56967222 -15186660 + L1MB4 LINE L1 5478 6169 -11 1586 194 0 27 chr20 56967725 56968019 -15185863 + AluJo SINE Alu 1 286 -26 1135 97 0 0 chr20 56968031 56968175 -15185707 + AluSq/x SINE Alu 1 144 -168 682 131 0 19 chr20 56968382 56968475 -15185407 + FLAM_C SINE Alu 23 116 -196 183 42 0 0 chr20 56968475 56968499 -15185383 + (CAA)n Simple_repeat Simple_repeat 1 24 0 2344 102 0 3 chr20 56968502 56968806 -15185076 - AluSx SINE Alu -9 303 1 339 297 47 0 chr20 56968937 56969065 -15184817 + MER5B DNA MER1_type 1 134 -44 1667 171 20 17 chr20 56969226 56969519 -15184363 - AluJb SINE Alu -18 294 1 1857 183 0 3 chr20 56969728 56970039 -15183843 + AluJb SINE Alu 1 310 -2 6248 184 42 39 chr20 56970062 56971562 -15182320 - Looper DNA T2_type 0 1558 64 2556 75 0 0 chr20 56971562 56971869 -15182013 + AluSg SINE Alu 1 307 -3 2368 93 3 0 chr20 56971869 56972169 -15181713 + AluSc SINE Alu 1 301 -8 753 198 66 18 chr20 56972174 56972341 -15181541 + FAM SINE Alu 1 175 0 6248 184 42 39 chr20 56972341 56972372 -15181510 - Looper DNA T2_type -1497 61 15 1875 162 13 7 chr20 56972404 56972707 -15181175 + AluSx SINE Alu 1 305 -7 1771 162 3 13 chr20 56972847 56973150 -15180732 + AluJb SINE Alu 10 309 -3 249 289 33 11 chr20 56973269 56973359 -15180523 - L1MC/D LINE L1 -2020 5788 5697 211 338 143 0 chr20 56973432 56973565 -15180317 + L2 LINE L2 2902 3053 -219 592 242 177 61 chr20 56973908 56974475 -15179407 + L1ME4a LINE L1 5494 6121 0 1793 157 59 6 chr20 56974585 56974923 -15178959 + MER46B DNA MER2_type 1 231 -5 1964 148 7 0 chr20 56975387 56975670 -15178212 + AluSx SINE Alu 1 285 -27 360 0 0 0 chr20 56975670 56975710 -15178172 + (CA)n Simple_repeat Simple_repeat 2 41 0 352 234 64 0 chr20 56975793 56975887 -15177995 + MER5A DNA MER1_type 68 167 -22 1475 236 52 110 chr20 56976642 56976709 -15177173 + MLT1G1 LTR MaLR 3 72 -523 343 176 27 0 chr20 56976709 56976783 -15177099 + L1MB5 LINE L1 6088 6163 -11 2468 71 0 0 chr20 56976785 56977079 -15176803 - AluY SINE Alu -17 294 1 1475 236 52 110 chr20 56977079 56977578 -15176304 + MLT1G1 LTR MaLR 73 591 -4 2429 63 20 0 chr20 56978759 56979058 -15174824 - AluSq SINE Alu -8 305 1 2625 59 0 0 chr20 56979387 56979690 -15174192 + AluY SINE Alu 1 303 -8 780 144 7 50 chr20 56979698 56979837 -15174045 + FLAM_C SINE Alu 1 133 0 2193 117 0 16 chr20 56979842 56980159 -15173723 + AluSx SINE Alu 1 312 0 1807 92 0 4 chr20 56981002 56981231 -15172651 + AluY SINE Alu 1 228 -83 2234 103 0 3 chr20 56981231 56981521 -15172361 + AluSq SINE Alu 11 299 -14 2258 104 3 7 chr20 56983297 56983595 -15170287 - AluSx SINE Alu -15 297 1 1506 161 24 62 chr20 56983740 56983899 -15169983 - AluJo SINE Alu -18 294 149 2398 84 7 0 chr20 56983899 56984196 -15169686 - AluSc SINE Alu -10 299 1 1506 161 24 62 chr20 56984196 56984327 -15169555 - AluJo SINE Alu -163 149 15 225 220 17 17 chr20 56984330 56984389 -15169493 + MER5A DNA MER1_type 130 188 -1 2175 117 0 10 chr20 56984418 56984717 -15169165 + AluSx SINE Alu 1 296 -16 288 45 0 55 chr20 56984923 56984946 -15168936 + AluY SINE Alu 2 2 -299 2240 110 14 0 chr20 56984946 56985237 -15168645 + AluSx SINE Alu 1 295 -17 288 45 0 55 chr20 56985237 56985272 -15168610 + AluY SINE Alu 1 36 -265 * 402 77 0 0 chr20 56985271 56985349 -15168533 + Alu SINE Alu 233 310 0 21 0 0 0 chr20 56985970 56985991 -15167891 + AT_rich Low_complexity Low_complexity 1 21 0 1909 159 0 3 chr20 56985991 56986280 -15167602 - AluSx SINE Alu -24 288 1 238 143 0 0 chr20 56986407 56986442 -15167440 - Alu SINE Alu -110 190 156 805 227 105 22 chr20 56986442 56986671 -15167211 - MIR SINE MIR -8 254 7 323 44 44 0 chr20 56987166 56987211 -15166671 + AluSq/x SINE Alu 97 143 -160 1501 175 21 28 chr20 56987455 56987746 -15166136 + AluJb SINE Alu 1 289 -23 22 0 0 0 chr20 56988615 56988637 -15165245 + AT_rich Low_complexity Low_complexity 1 22 0 2364 61 0 7 chr20 56988911 56989208 -15164674 + AluY SINE Alu 1 295 -16 2281 95 0 0 chr20 56989330 56989624 -15164258 + AluSc SINE Alu 1 294 -15 2108 128 3 0 chr20 56989838 56990142 -15163740 - AluSx SINE Alu -6 306 2 985 161 12 0 chr20 56990193 56990355 -15163527 - FRAM SINE Alu -20 156 1 1868 137 10 0 chr20 56990368 56990661 -15163221 + AluSq SINE Alu 1 296 -17 239 233 0 0 chr20 56990663 56990706 -15163176 - AluJ/monomer SINE Alu -255 48 6 1691 125 56 31 chr20 56990721 56991008 -15162874 - AluJb SINE Alu -18 294 1 701 190 62 62 chr20 56991026 56991221 -15162661 + AluJb SINE Alu 118 312 0 2110 103 0 0 chr20 56991453 56991761 -15162121 - AluSg SINE Alu 0 308 1 1860 131 17 0 chr20 56991763 56992054 -15161828 - AluSx SINE Alu -16 296 1 1888 149 17 0 chr20 56994497 56994799 -15159083 - AluSx SINE Alu -5 307 1 716 156 0 64 chr20 56995111 56995252 -15158630 + MER20 DNA MER1_type 2 133 -86 2038 115 10 0 chr20 56995373 56995668 -15158214 - AluSx SINE Alu -14 298 1 1889 136 7 10 chr20 56996778 56997072 -15156810 - AluSx SINE Alu -19 293 1 2102 68 41 17 chr20 56997711 56998005 -15155877 - AluY SINE Alu -10 301 1 1568 99 134 15 chr20 56999300 56999562 -15154320 - AluSc SINE Alu -16 293 1 2066 102 24 0 chr20 56999594 56999889 -15153993 + AluSp SINE Alu 1 302 -11 24 0 0 0 chr20 57000692 57000716 -15153166 + AT_rich Low_complexity Low_complexity 1 24 0 1231 143 0 10 chr20 57000855 57001051 -15152831 + AluSx SINE Alu 1 194 -118 2301 65 10 0 chr20 57001075 57001369 -15152513 + AluY SINE Alu 2 298 -13 1563 107 13 0 chr20 57001369 57001600 -15152282 + AluSc SINE Alu 71 306 -3 1010 136 6 0 chr20 57001600 57001762 -15152120 + AluSg/x SINE Alu 132 294 -16 1919 113 0 30 chr20 57001907 57002207 -15151675 - AluSx SINE Alu -21 291 1 2536 20 7 0 chr20 57002217 57002511 -15151371 - AluY SINE Alu -14 297 2 2350 57 3 3 chr20 57003331 57003628 -15150254 - AluSg SINE Alu -13 297 1 888 117 0 36 chr20 57003672 57003809 -15150073 + FLAM_C SINE Alu 1 132 -1 2224 87 0 3 chr20 57003815 57004113 -15149769 + AluY SINE Alu 1 297 -14 1558 197 14 0 chr20 57004317 57004611 -15149271 + AluJo SINE Alu 1 298 -14 1985 118 0 53 chr20 57004752 57004886 -15148996 + AluSq SINE Alu 3 142 -171 2010 135 3 6 chr20 57004886 57005198 -15148684 + AluSx SINE Alu 1 311 -1 1985 118 0 53 chr20 57005198 57005210 -15148672 + AluSq SINE Alu 142 153 -160 2181 82 0 26 chr20 57005210 57005516 -15148366 + AluY SINE Alu 1 298 -13 1985 118 0 53 chr20 57005516 57005691 -15148191 + AluSq SINE Alu 153 308 -5 2016 133 0 0 chr20 57006735 57007037 -15146845 - AluSx SINE Alu -5 307 6 246 280 80 48 chr20 57007381 57007506 -15146376 + MIR SINE MIR 3 131 -131 185 200 25 0 chr20 57007698 57007738 -15146144 + MIR SINE MIR 222 262 0 2019 129 6 3 chr20 57007901 57008212 -15145670 + AluSx SINE Alu 1 312 0 2339 70 0 3 chr20 57008976 57009274 -15144608 + AluY SINE Alu 2 298 -13 551 139 0 0 chr20 57009812 57009891 -15143991 + FLAM_A SINE Alu 20 98 -44 1932 144 163 90 chr20 57010160 57010351 -15143531 - MER6A DNA MER2_type -260 605 429 1963 103 0 4 chr20 57010351 57010632 -15143250 - AluSq SINE Alu -16 297 18 1932 144 163 90 chr20 57010632 57011004 -15142878 - MER6A DNA MER2_type -436 429 1 21 0 0 0 chr20 57011367 57011388 -15142494 + AT_rich Low_complexity Low_complexity 1 21 0 347 227 57 78 chr20 57012012 57012153 -15141729 + L1MC5 LINE L1 7747 7884 -77 1102 97 332 4 chr20 57012292 57012518 -15141364 - AluSg SINE Alu 0 300 1 1707 107 8 0 chr20 57012525 57012777 -15141105 + AluSg SINE Alu 42 295 -15 405 215 224 34 chr20 57013933 57014138 -15139744 - MIR SINE MIR -14 248 5 21 57 0 0 chr20 57014192 57014227 -15139655 + GC_rich Low_complexity Low_complexity 1 35 0 30 59 0 0 chr20 57014479 57014530 -15139352 + GC_rich Low_complexity Low_complexity 1 51 0 216 307 0 55 chr20 57014587 57014714 -15139168 + G-rich Low_complexity Low_complexity 3 122 0 249 200 17 0 chr20 57014802 57014862 -15139020 + C-rich Low_complexity Low_complexity 1 61 0 270 209 11 55 chr20 57015059 57015150 -15138732 + CT-rich Low_complexity Low_complexity 4 90 0 532 273 55 12 chr20 57015161 57015326 -15138556 - L2 LINE L2 -1 3312 3141 2215 68 3 10 chr20 57015339 57015650 -15138232 + AluY SINE Alu 3 311 0 2195 78 51 0 chr20 57015771 57016064 -15137818 + AluSx SINE Alu 1 308 -4 1523 154 6 103 chr20 57016704 57017035 -15136847 - AluJb SINE Alu -13 299 1 538 128 0 0 chr20 57017324 57017402 -15136480 - AluS SINE Alu -12 299 222 2127 88 3 7 chr20 57017432 57017729 -15136153 - AluSx SINE Alu 0 312 17 291 295 37 74 chr20 57017762 57017952 -15135930 + L2 LINE L2 3124 3306 -7 1976 130 0 0 chr20 57018187 57018480 -15135402 + AluSx SINE Alu 1 293 -19 2415 72 0 0 chr20 57018483 57018790 -15135092 + AluY SINE Alu 1 307 -4 227 237 59 81 chr20 57018812 57018998 -15134884 + L1MC4a LINE L1 4378 4559 -1587 1151 139 30 25 chr20 57019017 57019219 -15134663 + AluJb SINE Alu 86 288 -24 2114 114 0 0 chr20 57019513 57019810 -15134072 + AluSx SINE Alu 1 297 -15 1807 116 3 24 chr20 57019810 57020102 -15133780 + AluSc SINE Alu 1 286 -23 2018 83 13 13 chr20 57020104 57020406 -15133476 + AluY SINE Alu 1 302 -9 2224 96 3 3 chr20 57020567 57020879 -15133003 + AluSp SINE Alu 1 312 -1 630 175 25 150 chr20 57020898 57021012 -15132870 + FAM SINE Alu 1 81 -240 1902 123 0 4 chr20 57021012 57021289 -15132593 - AluSx SINE Alu -26 286 11 630 175 25 150 chr20 57021289 57021374 -15132508 + FAM SINE Alu 81 175 -10 508 306 112 58 chr20 57021387 57021676 -15132206 + L1MC4a LINE L1 5024 5335 -811 2413 56 7 3 chr20 57021676 57021982 -15131900 + AluY SINE Alu 1 307 -4 508 306 112 58 chr20 57021982 57022022 -15131860 + L1MC4a LINE L1 5335 5371 -775 2200 98 19 0 chr20 57022042 57022349 -15131533 + AluSp SINE Alu 1 313 0 852 125 0 109 chr20 57022389 57022573 -15131309 + AluSg/x SINE Alu 146 309 -1 2442 42 7 3 chr20 57022575 57022884 -15130998 + AluY SINE Alu 1 310 -1 1370 136 95 37 chr20 57022925 57023219 -15130663 + AluSx SINE Alu 1 311 -1 342 218 11 138 chr20 57023237 57023298 -15130584 + L1MC4a LINE L1 5688 5755 -2053 1986 96 11 4 chr20 57023298 57023605 -15130277 + AluSx SINE Alu 4 312 0 342 218 11 138 chr20 57023605 57023716 -15130166 + L1MC4a LINE L1 5755 5839 -1969 * 691 142 113 173 chr20 57023702 57023780 -15130102 + L1MC3 LINE L1 5176 5257 -909 183 80 0 0 chr20 57023780 57023805 -15130077 + (CATATA)n Simple_repeat Simple_repeat 4 28 0 1984 122 3 3 chr20 57023811 57024122 -15129760 - AluSx SINE Alu -1 311 1 1374 191 20 13 chr20 57024127 57024430 -15129452 - AluJo SINE Alu -7 305 1 691 142 113 173 chr20 57024430 57024654 -15129228 + L1MC3 LINE L1 5266 5502 -664 1808 140 27 3 chr20 57024654 57024947 -15128935 + AluSg SINE Alu 1 300 -10 691 142 113 173 chr20 57024947 57024972 -15128910 + L1MC3 LINE L1 5502 5435 -731 1364 157 21 105 chr20 57024972 57025102 -15128780 + AluYb8 SINE Alu 5 144 -174 1904 120 0 18 chr20 57025102 57025386 -15128496 + AluY SINE Alu 1 279 -32 1364 157 21 105 chr20 57025386 57025580 -15128302 + AluYb8 SINE Alu 144 302 -16 691 142 113 173 chr20 57025580 57025622 -15128260 + L1MC3 LINE L1 5434 5477 -689 2345 62 0 0 chr20 57025657 57025949 -15127933 - AluSc SINE Alu -17 292 1 22 35 0 0 chr20 57025952 57025981 -15127901 + AT_rich Low_complexity Low_complexity 1 29 0 2226 105 0 3 chr20 57025981 57026294 -15127588 - AluSx SINE Alu 0 312 1 806 181 0 0 chr20 57026296 57026429 -15127453 - AluJo SINE Alu -178 134 2 2533 216 68 58 chr20 57026429 57026737 -15127145 + L1MC3 LINE L1 5519 5823 -1962 2385 56 0 10 chr20 57026737 57027043 -15126839 + AluY SINE Alu 1 303 -8 2533 216 68 58 chr20 57027043 57027206 -15126676 + L1MC3 LINE L1 5823 5983 -1802 1724 122 3 38 chr20 57027206 57027494 -15126388 + AluJb SINE Alu 34 311 -1 2533 216 68 58 chr20 57027494 57027862 -15126020 + L1MC3 LINE L1 5983 6367 -1418 2073 122 0 3 chr20 57027879 57028182 -15125700 + AluSx SINE Alu 1 302 -10 714 196 32 21 chr20 57028191 57028359 -15125523 + L1M4 LINE L1 2912 3084 -3062 2533 58 0 0 chr20 57028359 57028670 -15125212 + AluY SINE Alu 1 311 0 714 196 32 21 chr20 57028670 57028690 -15125192 + L1M4 LINE L1 3084 3102 -3044 1967 118 3 7 chr20 57028703 57028990 -15124892 + AluSx SINE Alu 3 288 -24 207 0 0 0 chr20 57028995 57029018 -15124864 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 696 196 0 36 chr20 57029021 57029159 -15124723 + FLAM_C SINE Alu 1 133 0 2045 113 3 13 chr20 57029177 57029487 -15124395 + AluSx SINE Alu 1 307 -5 230 219 0 14 chr20 57029489 57029562 -15124320 + L1M4 LINE L1 3084 3155 -2991 1437 160 0 0 chr20 57029567 57029798 -15124084 + AluSx SINE Alu 5 235 -77 307 229 0 52 chr20 57029798 57029894 -15123988 + L1M4 LINE L1 3172 3262 -2884 2093 109 7 0 chr20 57030099 57030403 -15123479 - AluSg SINE Alu -4 306 1 847 201 16 11 chr20 57030532 57030721 -15123161 - AluSg/x SINE Alu -2 310 121 537 313 15 19 chr20 57030723 57030991 -15122891 - L1ME3A LINE L1 -225 5945 5679 453 36 0 0 chr20 57031013 57031068 -15122814 + (TA)n Simple_repeat Simple_repeat 1 55 0 2197 93 20 3 chr20 57031068 57031370 -15122512 - AluSx SINE Alu -5 307 1 2297 87 0 0 chr20 57031784 57032084 -15121798 - AluSg SINE Alu -10 300 1 2243 90 3 7 chr20 57032093 57032394 -15121488 - AluSp SINE Alu -13 300 1 2183 88 3 35 chr20 57032396 57032714 -15121168 - AluSx SINE Alu -4 308 1 361 282 0 36 chr20 57032722 57032832 -15121050 - HAL1 LINE L1 -2 2505 2400 551 106 0 0 chr20 57032835 57032920 -15120962 - Alu SINE Alu -5 306 222 856 163 88 0 chr20 57032937 57033084 -15120798 - AluJb SINE Alu -19 293 134 33 18 0 36 chr20 57033103 57033140 -15120742 + AT_rich Low_complexity Low_complexity 1 38 -15 297 0 0 0 chr20 57033140 57033173 -15120709 + (TA)n Simple_repeat Simple_repeat 2 34 0 2231 100 0 0 chr20 57033173 57033474 -15120408 - AluSc SINE Alu -8 301 1 33 18 0 36 chr20 57033474 57033490 -15120392 + AT_rich Low_complexity Low_complexity 36 53 0 979 161 18 12 chr20 57033490 57033658 -15120224 + FRAM SINE Alu 1 161 -15 1942 125 0 19 chr20 57033927 57034240 -15119642 - AluSg SINE Alu -3 307 1 2096 98 0 54 chr20 57034301 57034471 -15119411 - AluSx SINE Alu -12 300 122 243 0 0 0 chr20 57034471 57034498 -15119384 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2030 107 0 0 chr20 57034498 57034778 -15119104 - AluSc SINE Alu -29 280 1 2096 98 0 54 chr20 57034778 57034922 -15118960 - AluSx SINE Alu -188 124 2 541 115 0 172 chr20 57034965 57035043 -15118839 + FLAM_C SINE Alu 37 127 -185 2285 70 0 10 chr20 57035043 57035342 -15118540 - AluY SINE Alu -15 296 1 1905 148 3 0 chr20 57035351 57035655 -15118227 - AluSx SINE Alu -7 305 1 541 115 0 172 chr20 57035655 57035688 -15118194 + FLAM_C SINE Alu 100 137 -175 180 0 0 0 chr20 57035859 57035879 -15118003 + (A)n Simple_repeat Simple_repeat 1 20 0 1770 153 7 0 chr20 57035883 57036170 -15117712 + AluSq SINE Alu 1 289 -24 2105 112 0 10 chr20 57036187 57036499 -15117383 + AluSc SINE Alu 1 309 0 725 212 187 0 chr20 57036592 57036795 -15117087 - HAL1 LINE L1 -710 1797 1557 183 239 0 0 chr20 57036869 57036915 -15116967 + CT-rich Low_complexity Low_complexity 3 48 0 748 156 0 65 chr20 57037196 57037926 -15115956 - FAM SINE Alu -1 48 1 3621 159 6 43 chr20 57037219 57037789 -15116093 - L1MB5 LINE L1 -8 6166 5625 897 155 5 103 chr20 57037789 57037926 -15115956 - FAM SINE Alu -136 175 61 2081 148 0 0 chr20 57037926 57038224 -15115658 - AluSx SINE Alu -10 302 5 582 140 4 109 chr20 57038224 57038410 -15115472 - L1ME LINE L1 -743 5427 5223 897 155 5 103 chr20 57038224 57038280 -15115602 - FAM SINE Alu -250 61 1 3621 159 6 43 chr20 57038280 57038409 -15115473 - L1MB5 LINE L1 -549 5625 5493 2031 148 3 3 chr20 57038410 57038707 -15115175 - AluJb SINE Alu -13 299 3 582 140 4 109 chr20 57038707 57038769 -15115113 - L1ME LINE L1 -947 5223 5360 741 146 62 0 chr20 57038769 57038913 -15114969 - L1MA9 LINE L1 0 6312 6160 582 140 4 109 chr20 57038913 57039008 -15114874 - L1ME LINE L1 -809 5361 5258 2133 99 46 3 chr20 57039036 57039318 -15114564 - AluSp SINE Alu -19 294 1 1359 153 0 38 chr20 57039414 57039649 -15114233 - AluJo SINE Alu 0 312 87 2266 100 3 0 chr20 57039659 57039948 -15113934 - AluSg SINE Alu -20 290 1 183 243 0 0 chr20 57040139 57040176 -15113706 - MIR SINE MIR -70 192 156 1969 133 7 4 chr20 57040351 57040630 -15113252 + AluSx SINE Alu 1 280 -32 189 0 0 0 chr20 57040630 57040651 -15113231 + (CAAAA)n Simple_repeat Simple_repeat 5 25 0 2330 123 0 0 chr20 57040656 57040966 -15112916 + AluSx SINE Alu 1 310 -2 376 235 176 20 chr20 57040997 57041150 -15112732 + MIR SINE MIR 32 208 -54 598 122 28 9 chr20 57041211 57041318 -15112564 - MLT1A1 LTR MaLR -256 109 1 570 213 79 74 chr20 57041331 57041547 -15112335 - MLT1J LTR MaLR -3 508 292 340 270 224 25 chr20 57041571 57041767 -15112115 + L2 LINE L2 2911 3145 -168 469 215 56 19 chr20 57041776 57041883 -15111999 + MIR SINE MIR 60 170 -92 220 294 15 0 chr20 57041948 57042016 -15111866 + L2 LINE L2 3244 3312 -1 2246 132 0 3 chr20 57042146 57042501 -15111381 + AluSx SINE Alu 2 355 0 738 189 0 8 chr20 57042529 57042656 -15111226 + FLAM_A SINE Alu 1 126 -7 2176 120 3 19 chr20 57042664 57042981 -15110901 + AluSx SINE Alu 1 312 0 969 217 198 24 chr20 57043427 57043846 -15110036 - LTR50 LTR ERVL -303 492 1 348 247 49 0 chr20 57043999 57044080 -15109802 - MIR SINE MIR -158 104 20 30 0 0 0 chr20 57044090 57044120 -15109762 + AT_rich Low_complexity Low_complexity 1 30 0 1245 131 0 0 chr20 57044121 57044297 -15109585 + AluSg/x SINE Alu 137 312 0 2392 82 0 3 chr20 57044302 57044595 -15109287 - AluSp SINE Alu -21 292 1 2640 34 0 3 chr20 57044650 57044945 -15108937 - AluY SINE Alu -17 294 1 246 32 0 0 chr20 57044962 57044993 -15108889 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 605 204 9 0 chr20 57044997 57045110 -15108772 - FLAM_C SINE Alu -19 114 1 1922 106 99 0 chr20 57045180 57045464 -15108418 + AluJb SINE Alu 1 312 0 257 258 21 31 chr20 57045464 57045561 -15108321 - L1ME4a LINE L1 -83 6038 5943 281 356 44 37 chr20 57046316 57046451 -15107431 - L2 LINE L2 -5 3308 3173 342 334 196 26 chr20 57046506 57046934 -15106948 + L2 LINE L2 2247 2747 -567 221 0 35 0 chr20 57047245 57047274 -15106608 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 209 295 48 19 chr20 57047285 57047390 -15106492 + L2 LINE L2 2784 2891 -423 2348 80 0 0 chr20 57047391 57047677 -15106205 - AluSg SINE Alu -21 289 4 884 125 23 0 chr20 57047680 57047808 -15106074 - AluSg SINE Alu -179 131 1 1281 162 0 132 chr20 57048555 57048895 -15104987 - AluSc SINE Alu -14 295 1 2393 62 17 3 chr20 57048941 57049231 -15104651 - AluSp SINE Alu -19 294 1 23 0 0 0 chr20 57049231 57049254 -15104628 + AT_rich Low_complexity Low_complexity 1 23 0 1967 168 0 0 chr20 57050017 57050315 -15103567 + AluSx SINE Alu 1 298 -14 1591 188 11 4 chr20 57050315 57050592 -15103290 - AluJo SINE Alu -30 282 4 2266 123 0 3 chr20 57050773 57051081 -15102801 - AluSx SINE Alu -5 307 1 456 290 208 5 chr20 57051120 57051327 -15102555 + MIR SINE MIR 1 249 -13 687 188 60 0 chr20 57051641 57051758 -15102124 - FLAM_C SINE Alu -18 125 2 1571 247 80 21 chr20 57051785 57051872 -15102010 + L2 LINE L2 2609 2689 -624 2608 50 0 0 chr20 57051872 57052173 -15101709 - AluY SINE Alu -10 301 1 1571 247 80 21 chr20 57052173 57052741 -15101141 + L2 LINE L2 2689 3311 -2 765 139 0 76 chr20 57053076 57053220 -15100662 - FLAM_C SINE Alu 0 133 1 2883 7 0 0 chr20 57053276 57053580 -15100302 - AluYa5 SINE Alu -7 304 1 542 231 91 38 chr20 57053593 57053779 -15100103 - L1MC4a LINE L1 -1 7994 7631 2223 99 0 7 chr20 57053792 57054086 -15099796 - AluSx SINE Alu -19 293 2 2533 80 0 0 chr20 57054257 57054557 -15099325 - AluSg SINE Alu -10 300 1 2131 119 24 0 chr20 57054560 57054854 -15099028 - AluSq SINE Alu -12 301 1 958 92 0 0 chr20 57054858 57054978 -15098904 - AluSq/x SINE Alu -180 133 14 2528 43 23 10 chr20 57055449 57055748 -15098134 - AluY SINE Alu -8 303 1 2063 145 10 13 chr20 57056064 57056368 -15097514 - AluSx SINE Alu -9 303 1 237 297 93 17 chr20 57056982 57057100 -15096782 + MIR SINE MIR 48 174 -88 253 283 142 0 chr20 57057349 57057462 -15096420 + L2 LINE L2 2387 2515 -799 445 319 132 40 chr20 57057492 57057765 -15096117 + L2 LINE L2 2969 3266 -6 336 259 72 7 chr20 57058038 57058177 -15095705 + L1MC4 LINE L1 7275 7422 -620 1700 186 3 13 chr20 57058294 57058605 -15095277 - AluJo SINE Alu -4 308 1 351 143 0 0 chr20 57058605 57058661 -15095221 - AluJo SINE Alu -161 141 86 2186 87 56 7 chr20 57058766 57058900 -15094982 + AluSp SINE Alu 1 127 -186 2699 42 0 3 chr20 57058900 57059209 -15094673 + AluY SINE Alu 1 308 -3 2186 87 56 7 chr20 57059209 57059360 -15094522 + AluSp SINE Alu 127 300 -13 293 244 259 0 chr20 57059454 57059589 -15094293 + L1MC4 LINE L1 7793 7962 -80 563 285 85 49 chr20 57060350 57060682 -15093200 + L2 LINE L2 2546 2909 -404 2207 130 0 0 chr20 57060682 57060982 -15092900 - AluSx SINE Alu -12 300 1 563 285 85 49 chr20 57060982 57061132 -15092750 + L2 LINE L2 2909 3052 -261 256 239 28 0 chr20 57061871 57061942 -15091940 - MIR SINE MIR -12 250 178 2668 40 0 0 chr20 57062165 57062461 -15091421 - AluY SINE Alu -15 296 1 446 264 49 21 chr20 57062985 57063129 -15090753 + MIR SINE MIR 8 155 -107 476 171 0 23 chr20 57063343 57063431 -15090451 - AluJ/FLAM SINE Alu -225 87 2 24 53 0 0 chr20 57063432 57063470 -15090412 + AT_rich Low_complexity Low_complexity 1 38 0 1803 164 20 3 chr20 57063472 57063765 -15090117 + AluJo SINE Alu 3 300 -12 564 251 266 25 chr20 57063912 57064314 -15089568 - L2 LINE L2 -1 3312 2814 2307 101 0 0 chr20 57064429 57064727 -15089155 - AluSc SINE Alu -3 306 9 1735 163 10 36 chr20 57064728 57064886 -15088996 - AluJo SINE Alu -19 293 145 2099 127 3 10 chr20 57064886 57065185 -15088697 - AluSx SINE Alu -15 297 1 1735 163 10 36 chr20 57065185 57065327 -15088555 - AluJo SINE Alu -167 145 1 2269 177 37 77 chr20 57065766 57065844 -15088038 + L1MB4 LINE L1 5582 5662 -518 1695 151 131 0 chr20 57065844 57066142 -15087740 - MER1B DNA MER1_type 0 337 1 2269 177 37 77 chr20 57066142 57066686 -15087196 + L1MB4 LINE L1 5662 6179 -1 359 305 121 72 chr20 57066689 57066847 -15087035 - L1MC4a LINE L1 -1831 5977 5801 2403 87 0 0 chr20 57066847 57067145 -15086737 - AluY SINE Alu -13 298 1 359 305 121 72 chr20 57067145 57067235 -15086647 - L1MC4a LINE L1 -2007 5801 5717 1207 179 5 5 chr20 57067235 57067436 -15086446 + AluJb SINE Alu 85 285 -27 615 208 27 55 chr20 57067469 57067652 -15086230 - L1MC4a LINE L1 -2079 5729 5552 315 292 35 0 chr20 57067763 57067876 -15086006 + HAL1 LINE L1 2245 2361 -146 2190 123 13 0 chr20 57067887 57068187 -15085695 - AluSx SINE Alu -8 304 1 2435 79 3 3 chr20 57069133 57069437 -15084445 - AluSc SINE Alu -4 305 2 279 160 0 0 chr20 57070649 57070699 -15083183 + FAM SINE Alu 125 174 -1 309 299 157 0 chr20 57070815 57070962 -15082920 - MIR SINE MIR -19 243 74 2018 116 4 0 chr20 57071108 57071376 -15082506 - AluSq SINE Alu -44 269 1 1747 160 23 20 chr20 57071730 57072036 -15081846 - AluJb SINE Alu -5 307 1 2472 71 0 3 chr20 57073291 57073585 -15080297 - AluSg SINE Alu -17 293 1 2309 114 0 10 chr20 57076391 57076697 -15077185 + AluSq SINE Alu 1 303 -10 237 320 100 0 chr20 57076792 57076892 -15076990 - MIR SINE MIR -41 221 112 244 222 0 42 chr20 57076893 57076965 -15076917 - FLAM_A SINE Alu 0 133 65 2211 118 3 10 chr20 57076973 57077270 -15076612 - AluSq SINE Alu -18 295 1 1241 108 0 0 chr20 57077270 57077427 -15076455 - AluSc SINE Alu -152 157 1 237 241 52 35 chr20 57077439 57077497 -15076385 - MIR SINE MIR -105 103 45 2129 117 7 17 chr20 57077559 57077859 -15076023 - AluSx SINE Alu -15 297 1 689 205 8 0 chr20 57078134 57078251 -15075631 + AluJo/FLAM SINE Alu 1 118 -184 2004 120 40 10 chr20 57078251 57078550 -15075332 - AluSx SINE Alu -4 308 1 2434 95 3 0 chr20 57078554 57078860 -15075022 - AluSx SINE Alu -5 307 1 23 0 0 0 chr20 57079033 57079056 -15074826 + AT_rich Low_complexity Low_complexity 1 23 0 248 229 0 66 chr20 57079312 57079373 -15074509 - L2 LINE L2 0 3313 3257 1009 307 44 41 chr20 57079537 57079973 -15073909 - L2 LINE L2 -413 2901 2465 2299 124 7 0 chr20 57080437 57080744 -15073138 - AluSx SINE Alu -2 310 2 183 279 123 33 chr20 57081335 57081457 -15072425 + L2 LINE L2 2625 2757 -557 2322 100 3 0 chr20 57081461 57081761 -15072121 - AluY SINE Alu -10 301 1 837 146 8 8 chr20 57081772 57081902 -15071980 - FLAM_C SINE Alu 0 133 4 286 255 122 31 chr20 57082041 57082139 -15071743 + L2 LINE L2 3197 3303 -10 904 231 39 21 chr20 57082514 57082748 -15071134 + MIR SINE MIR 9 246 -16 229 253 81 40 chr20 57082763 57082862 -15071020 + L2 LINE L2 3173 3275 -38 204 211 0 0 chr20 57084042 57084080 -15069802 + CT-rich Low_complexity Low_complexity 3 40 0 2270 87 0 39 chr20 57084121 57084430 -15069452 - AluSg SINE Alu -13 297 1 2397 62 35 0 chr20 57084517 57084806 -15069076 - AluSp SINE Alu -14 299 1 2200 122 7 0 chr20 57084944 57085240 -15068642 + AluSx SINE Alu 1 298 -14 2033 114 7 0 chr20 57085240 57085513 -15068369 + AluSx SINE Alu 1 275 -37 319 55 18 18 chr20 57085530 57085585 -15068297 + (TAAA)n Simple_repeat Simple_repeat 2 56 0 1680 166 20 24 chr20 57085852 57086147 -15067735 - AluJo SINE Alu -18 294 1 549 269 70 17 chr20 57086149 57086550 -15067332 - L1ME1 LINE L1 -280 5886 5325 1283 92 0 29 chr20 57086552 57086725 -15067157 + AluSq SINE Alu 133 300 -13 1617 186 24 17 chr20 57087082 57087217 -15066665 + AluJo SINE Alu 5 138 -174 2154 132 0 3 chr20 57087217 57087506 -15066376 + AluSx SINE Alu 1 288 -24 1617 186 24 17 chr20 57087506 57087666 -15066216 + AluJo SINE Alu 138 302 -10 3033 71 51 29 chr20 57087688 57088067 -15065815 + L1PA13 LINE L1 5704 6096 -67 2504 47 7 10 chr20 57088067 57088366 -15065516 - AluY SINE Alu -13 298 1 3033 71 51 29 chr20 57088366 57088435 -15065447 + L1PA13 LINE L1 6096 6162 -1 464 238 117 95 chr20 57088537 57088551 -15065331 + MER102b DNA MER1_type 103 115 -1313 2135 125 30 7 chr20 57088551 57088856 -15065026 + AluSx SINE Alu 1 312 0 464 238 117 95 chr20 57088856 57089072 -15064810 + MER102b DNA MER1_type 115 338 -3 257 333 0 0 chr20 57089129 57089213 -15064669 - MIR SINE MIR -53 209 126 293 200 31 0 chr20 57089412 57089477 -15064405 - MER116 DNA Mariner -13 67 1 400 240 215 0 chr20 57089481 57089602 -15064280 - MIR SINE MIR -108 154 8 1025 149 0 0 chr20 57090086 57090240 -15063642 + AluSq SINE Alu 1 154 -159 771 134 296 6 chr20 57090240 57090360 -15063522 - MER46A DNA MER2_type -2499 232 148 2256 86 0 0 chr20 57090360 57090651 -15063231 + AluSg SINE Alu 1 291 -19 771 134 296 6 chr20 57090651 57090709 -15063173 - MER46A DNA MER2_type -2583 148 2 526 232 27 0 chr20 57090741 57090853 -15063029 + MLT1J LTR MaLR 1 115 -396 390 294 131 13 chr20 57090947 57091100 -15062782 + MLT1J LTR MaLR 292 462 -49 736 302 60 8 chr20 57091458 57091706 -15062176 + MIR SINE MIR 2 262 0 272 322 56 0 chr20 57091704 57091794 -15062088 - L2 LINE L2 -5 3267 3173 * 22 35 0 0 chr20 57092121 57092150 -15061732 + AT_rich Low_complexity Low_complexity 1 29 0 349 242 90 90 chr20 57092182 57092494 -15061388 - L2 LINE L2 -225 3047 2742 22 0 0 0 chr20 57092757 57092779 -15061103 + AT_rich Low_complexity Low_complexity 1 22 0 342 239 100 110 chr20 57092862 57093171 -15060711 - L1MC4a LINE L1 -1782 6026 5721 2066 107 0 10 chr20 57093316 57093614 -15060268 - AluSc SINE Alu -14 295 1 570 204 191 0 chr20 57093735 57093882 -15060000 - FAM SINE Alu 0 175 1 22 0 0 0 chr20 57093896 57093918 -15059964 + AT_rich Low_complexity Low_complexity 1 22 0 602 264 28 125 chr20 57094131 57094294 -15059588 + MIR SINE MIR 3 128 -134 2281 77 0 7 chr20 57094294 57094593 -15059289 - AluY SINE Alu -14 297 1 602 264 28 125 chr20 57094593 57094717 -15059165 + MIR SINE MIR 128 262 0 22 0 0 0 chr20 57094717 57094739 -15059143 + AT_rich Low_complexity Low_complexity 1 22 0 5773 102 27 49 chr20 57094911 57095818 -15058064 + L1PA15 LINE L1 5113 6009 -156 2105 114 3 0 chr20 57095818 57096108 -15057774 + AluSx SINE Alu 1 291 -21 5773 102 27 49 chr20 57096108 57096260 -15057622 + L1PA15 LINE L1 6009 6163 -2 554 304 203 0 chr20 57098471 57098599 -15055283 + MIR SINE MIR 2 103 -159 2047 100 3 30 chr20 57098599 57098900 -15054982 - AluSg SINE Alu -15 295 3 554 304 203 0 chr20 57098900 57098988 -15054894 + MIR SINE MIR 103 262 0 2104 111 0 0 chr20 57099544 57099850 -15054032 - AluY SINE Alu -5 306 1 1958 141 0 0 chr20 57100066 57100363 -15053519 + AluJb SINE Alu 1 297 -15 572 202 143 25 chr20 57100567 57100770 -15053112 + MER33 DNA MER1_type 1 227 -97 2133 95 0 3 chr20 57100894 57101206 -15052676 + AluSx SINE Alu 1 311 0 247 172 35 58 chr20 57101206 57101259 -15052623 + MER33 DNA MER1_type 271 323 -2301 2541 45 0 3 chr20 57101259 57101571 -15052311 + AluY SINE Alu 1 311 0 247 172 35 58 chr20 57101571 57101604 -15052278 + MER33 DNA MER1_type 323 355 -8 1363 159 6 84 chr20 57101754 57102075 -15051807 - AluJo SINE Alu -16 296 1 222 241 0 35 chr20 57103407 57103465 -15050417 + GA-rich Low_complexity Low_complexity 3 58 0 209 364 0 26 chr20 57103903 57104057 -15049825 + G-rich Low_complexity Low_complexity 2 151 0 2031 125 0 0 chr20 57105761 57106065 -15047817 + AluSx SINE Alu 1 304 -8 2150 154 182 11 chr20 57107529 57107995 -15045887 - LTR10B LTR ERV1 0 547 2 2718 194 31 13 chr20 57107999 57108546 -15045336 - HERVI LTR ERV1 -1 7784 7228 806 116 47 0 chr20 57108552 57108681 -15045201 - AluSg SINE Alu -13 299 165 732 118 0 0 chr20 57108686 57108788 -15045094 - AluSg SINE Alu -207 103 2 6178 237 71 30 chr20 57108788 57110538 -15043344 - HERVI LTR ERV1 -575 6074 4253 2360 243 17 4 chr20 57110548 57111006 -15042876 - HERVI LTR ERV1 -4495 3290 2823 2009 135 13 0 chr20 57111006 57111310 -15042572 - AluSg SINE Alu -2 308 1 2360 243 17 4 chr20 57111310 57111374 -15042508 - HERVI LTR ERV1 -4962 2823 2761 * 2690 241 60 35 chr20 57111369 57112204 -15041678 - HERVI LTR ERV1 -4361 2288 1433 3290 226 93 70 chr20 57112204 57113489 -15040393 - HERVI LTR ERV1 -5330 1319 5 1882 187 236 5 chr20 57113489 57113933 -15039949 - LTR10B LTR ERV1 0 547 1 813 206 93 16 chr20 57114829 57115023 -15038859 - AluJo SINE Alu -19 293 85 358 248 124 18 chr20 57115023 57115136 -15038746 - FAM SINE Alu -50 125 1 2145 99 10 0 chr20 57116165 57116459 -15037423 - AluY SINE Alu -14 297 1 1452 94 72 9 chr20 57116605 57116828 -15037054 - AluSx SINE Alu -75 237 1 359 239 204 9 chr20 57116963 57117076 -15036806 + MLT1F1 LTR MaLR 423 557 -10 1408 237 163 43 chr20 57117217 57117884 -15035998 + L2 LINE L2 2327 3064 -249 701 138 98 24 chr20 57117905 57118028 -15035854 - FLAM_C SINE Alu -1 132 1 200 211 0 18 chr20 57118060 57118117 -15035765 + (TA)n Simple_repeat Simple_repeat 1 56 0 207 270 32 0 chr20 57118121 57118184 -15035698 - MIR SINE MIR -173 89 25 1764 126 39 0 chr20 57118189 57118475 -15035407 - AluSx SINE Alu -15 297 1 270 170 21 0 chr20 57118847 57118894 -15034988 + MIR SINE MIR 99 146 -62 316 244 277 0 chr20 57118894 57119013 -15034869 - MIR SINE MIR -14 248 97 2225 104 0 0 chr20 57119133 57119442 -15034440 + AluSc SINE Alu 1 309 0 292 260 39 0 chr20 57119631 57119708 -15034174 + MIR SINE MIR 118 197 -65 8938 35 21 2 chr20 57119748 57120799 -15033083 + MER11C LTR ERVK 1 1071 0 828 241 98 38 chr20 57120820 57121084 -15032798 + L1ME1 LINE L1 5808 6096 -70 2135 102 0 26 chr20 57121084 57121389 -15032493 + AluSx SINE Alu 1 297 -15 828 241 98 38 chr20 57121389 57121440 -15032442 + L1ME1 LINE L1 6096 6142 -24 1634 152 4 4 chr20 57121444 57121714 -15032168 - AluJb SINE Alu -10 302 33 319 237 51 0 chr20 57121734 57121793 -15032089 + MIR SINE MIR 23 84 -178 299 224 150 82 chr20 57122269 57122416 -15031466 - Charlie8 DNA MER1_type -2260 157 1 2232 101 0 0 chr20 57122505 57122803 -15031079 - AluSc SINE Alu -11 298 1 347 245 145 24 chr20 57123507 57123525 -15030357 - MIR SINE MIR -34 228 214 1874 126 14 3 chr20 57123525 57123819 -15030063 - AluJo SINE Alu -5 307 11 347 245 145 24 chr20 57123819 57124005 -15029877 - MIR SINE MIR -48 214 4 354 196 39 20 chr20 57124601 57124703 -15029179 + L1MD3 LINE L1 7882 7985 -10 1862 64 4 0 chr20 57124901 57125135 -15028747 - AluSq SINE Alu -78 235 1 2007 136 7 0 chr20 57125224 57125532 -15028350 - AluSx SINE Alu -2 310 1 457 247 33 27 chr20 57125712 57125862 -15028020 - L1MC5 LINE L1 -519 7442 7292 1585 128 25 7 chr20 57125906 57126026 -15027856 - L1MA8 LINE L1 0 6291 6175 1807 109 25 4 chr20 57126026 57126302 -15027580 - AluSq SINE Alu -15 298 17 1585 128 25 7 chr20 57126302 57126462 -15027420 - L1MA8 LINE L1 -116 6175 6006 229 121 0 136 chr20 57126474 57126540 -15027342 - L1MA8 LINE L1 -349 5963 5907 1545 145 57 10 chr20 57126565 57126861 -15027021 - AluJb SINE Alu -2 310 1 1998 119 7 0 chr20 57126868 57127153 -15026729 - AluSx SINE Alu -25 287 1 1469 170 18 70 chr20 57127153 57127448 -15026434 - Charlie1a DNA MER1_type -2405 356 78 2226 81 7 0 chr20 57127448 57127746 -15026136 + AluY SINE Alu 1 300 -11 1469 170 18 70 chr20 57127746 57127779 -15026103 - Charlie1a DNA MER1_type -2683 78 45 332 244 171 0 chr20 57127805 57127887 -15025995 - L1MD3 LINE L1 -177 7818 7652 954 175 6 0 chr20 57127902 57128068 -15025814 - L1PA16 LINE L1 -11 6155 5989 2276 143 16 16 chr20 57128068 57128308 -15025574 - L1PA16 LINE L1 -99 6067 5825 2212 105 3 0 chr20 57128308 57128613 -15025269 - AluSx SINE Alu -4 308 3 2276 143 16 16 chr20 57128613 57128756 -15025126 - L1PA16 LINE L1 -340 5826 5684 713 202 0 0 chr20 57128806 57128930 -15024952 - AluSg/x SINE Alu -13 299 176 1945 134 0 3 chr20 57128950 57129241 -15024641 + AluSx SINE Alu 1 290 -22 587 285 47 10 chr20 57129246 57129439 -15024443 - L2 LINE L2 -204 3109 2910 2234 90 0 10 chr20 57129987 57130287 -15023595 - AluSq SINE Alu -16 297 1 351 230 69 0 chr20 57130467 57130554 -15023328 + MIR SINE MIR 72 164 -98 266 246 77 0 chr20 57130653 57130718 -15023164 + MLT1J LTR MaLR 111 180 -331 2149 112 13 0 chr20 57130805 57131108 -15022774 + AluSx SINE Alu 1 307 -5 215 132 53 0 chr20 57131205 57131243 -15022639 - MER5A DNA MER1_type -77 112 73 422 332 59 23 chr20 57131248 57131504 -15022378 - MLT1L LTR MaLR -97 518 254 527 254 25 8 chr20 57131595 57131713 -15022169 - MLT1L LTR MaLR -350 265 146 831 163 11 87 chr20 57131717 57131792 -15022090 + MER5A DNA MER1_type 8 87 -102 2252 103 0 0 chr20 57131792 57132092 -15021790 + AluSg SINE Alu 1 300 -10 831 163 11 87 chr20 57132092 57132200 -15021682 + MER5A DNA MER1_type 87 177 -12 223 283 0 0 chr20 57132202 57132248 -15021634 + MER5B DNA MER1_type 14 59 -119 657 190 4 129 chr20 57132251 57132309 -15021573 + L1ME3 LINE L1 5960 6024 -138 635 179 27 9 chr20 57132309 57132421 -15021461 - MER81 DNA DNA 0 114 1 657 190 4 129 chr20 57132421 57132526 -15021356 + L1ME3 LINE L1 6024 6088 -74 1652 136 7 61 chr20 57132526 57132836 -15021046 + AluJo SINE Alu 1 293 -19 657 190 4 129 chr20 57132836 57132903 -15020979 + L1ME3 LINE L1 6088 6162 0 460 336 0 0 chr20 57132903 57133022 -15020860 + MER5B DNA MER1_type 54 172 -6 373 173 27 0 chr20 57133056 57133131 -15020751 - MER5A DNA MER1_type -80 109 33 1998 104 7 4 chr20 57134089 57134388 -15019494 - AluSx SINE Alu 0 302 3 21 0 0 0 chr20 57134426 57134447 -15019435 + AT_rich Low_complexity Low_complexity 1 21 0 642 162 0 9 chr20 57134493 57134598 -15019284 - AluJb SINE Alu -207 105 2 1998 75 37 34 chr20 57134614 57134909 -15018973 - AluY SINE Alu -15 296 1 781 79 0 0 chr20 57134920 57135021 -15018861 - AluY SINE Alu -24 287 187 280 254 0 0 chr20 57135032 57135045 -15018837 - L1MA10 LINE L1 -88 6246 6234 3554 209 25 20 chr20 57135045 57135857 -15018025 - L1ME1 LINE L1 -92 6074 5259 921 250 78 23 chr20 57136024 57136280 -15017602 + MLT1K LTR MaLR 1 270 -318 457 261 124 29 chr20 57136302 57136543 -15017339 + L2 LINE L2 2990 3253 -60 275 157 0 57 chr20 57136561 57136631 -15017251 - L2 LINE L2 -777 2537 2472 524 246 32 16 chr20 57136685 57136811 -15017071 - MIR3 SINE MIR -75 133 6 1692 225 72 41 chr20 57136888 57137446 -15016436 - MLT1F1 LTR MaLR 0 567 2 1982 246 131 54 chr20 57137448 57137861 -15016021 - L2 LINE L2 -86 3227 2847 1997 98 63 0 chr20 57137861 57138146 -15015736 + AluSx SINE Alu 1 303 -9 1982 246 131 54 chr20 57138146 57138517 -15015365 - L2 LINE L2 -466 2847 2506 243 0 0 0 chr20 57138517 57138544 -15015338 + (TTTTA)n Simple_repeat Simple_repeat 3 29 0 1982 246 131 54 chr20 57138544 57138568 -15015314 - L2 LINE L2 -807 2506 2485 1687 171 3 7 chr20 57138568 57138877 -15015005 - AluJb SINE Alu 0 308 1 1982 246 131 54 chr20 57138877 57139198 -15014684 - L2 LINE L2 -828 2485 2013 648 279 49 37 chr20 57139206 57139567 -15014315 + MLT1G LTR MaLR 3 373 -217 1518 152 4 8 chr20 57140246 57140483 -15013399 + AluYa5 SINE Alu 1 236 -75 * 1948 136 0 0 chr20 57140481 57140786 -15013096 + AluJb SINE Alu 17 321 0 2128 120 3 3 chr20 57141055 57141346 -15012536 + AluSq SINE Alu 1 291 -22 907 249 94 63 chr20 57141361 57141663 -15012219 - L1MC4a LINE L1 -1885 5923 5595 1856 138 3 30 chr20 57141663 57141960 -15011922 - AluJo SINE Alu -1 311 23 907 249 94 63 chr20 57141960 57142199 -15011683 - L1MC4a LINE L1 -2213 5595 5365 445 255 21 21 chr20 57142199 57142344 -15011538 - HAL1 LINE L1 -118 2389 2245 2304 122 6 0 chr20 57142393 57142704 -15011178 - AluSq SINE Alu 0 313 1 232 210 0 0 chr20 57142705 57142767 -15011115 - MER113 DNA MER1_type? -325 196 135 6176 139 22 22 chr20 57142777 57143766 -15010116 - L1MC1 LINE L1 -2 6331 5344 2378 85 0 10 chr20 57143766 57144072 -15009810 - AluSq SINE Alu -10 303 1 6176 139 22 22 chr20 57144072 57144237 -15009645 - L1MC1 LINE L1 -989 5344 5180 366 229 38 15 chr20 57144247 57144378 -15009504 - MER113 DNA MER1_type? -387 134 1 970 144 28 6 chr20 57145584 57145764 -15008118 + MER53 DNA DNA 6 189 0 181 254 85 0 chr20 57145949 57146008 -15007874 - MIR SINE MIR -172 90 27 1035 149 7 0 chr20 57146201 57146355 -15007527 - FRAM SINE Alu -22 154 1 1783 158 11 11 chr20 57146574 57146889 -15006993 + AluJo SINE Alu 1 315 0 237 319 51 58 chr20 57146981 57147119 -15006763 - MIR SINE MIR -57 151 35 914 254 40 26 chr20 57147783 57148011 -15005871 - MIR SINE MIR 0 262 32 1823 147 12 64 chr20 57148131 57148521 -15005361 - AluJb SINE Alu 0 373 1 1574 246 78 34 chr20 57148884 57149421 -15004461 - MLT1K LTR MaLR -8 580 20 2278 98 30 0 chr20 57149767 57150063 -15003819 + AluSg SINE Alu 1 305 -5 478 261 35 0 chr20 57150387 57150502 -15003380 - L2 LINE L2 -18 3254 3136 309 373 53 13 chr20 57150682 57150832 -15003050 - L3 LINE CR1 -30 1547 1392 * 1232 265 58 57 chr20 57150827 57151536 -15002346 + L2 LINE L2 2595 3313 0 202 259 98 45 chr20 57151602 57151714 -15002168 + MIR SINE MIR 41 158 -104 193 306 141 0 chr20 57152047 57152132 -15001750 + MIR SINE MIR 164 260 -2 199 178 22 44 chr20 57152181 57152271 -15001611 + CT-rich Low_complexity Low_complexity 2 89 0 375 324 19 0 chr20 57152505 57152613 -15001269 + L2 LINE L2 3204 3313 0 2069 137 0 23 chr20 57153130 57153436 -15000446 - AluJb SINE Alu -13 299 1 414 196 0 54 chr20 57153444 57153536 -15000346 + MER82 DNA MER2_type 8 94 -559 248 315 97 24 chr20 57153565 57153730 -15000152 - MIR SINE MIR -74 188 12 983 236 10 0 chr20 57153771 57153979 -14999903 + MER82 DNA MER2_type 444 653 0 2091 113 0 3 chr20 57154058 57154367 -14999515 + AluSx SINE Alu 1 308 0 471 319 43 0 chr20 57154478 57154616 -14999266 - MIR SINE MIR -3 259 116 1223 208 112 3 chr20 57155309 57155612 -14998270 - MLT1K LTR MaLR 0 588 253 610 158 20 20 chr20 57155618 57155719 -14998163 + FRAM SINE Alu 8 108 -68 204 40 0 0 chr20 57155737 57155762 -14998120 + (CAAT)n Simple_repeat Simple_repeat 3 27 0 537 248 28 0 chr20 57155762 57155907 -14997975 - L2 LINE L2 -616 2698 2550 411 262 40 56 chr20 57156054 57156180 -14997702 - MIR SINE MIR -80 182 59 2069 106 0 3 chr20 57156249 57156531 -14997351 - AluSq SINE Alu -1 312 32 644 265 95 0 chr20 57156773 57156962 -14996920 - MIR SINE MIR -10 252 46 626 218 4 22 chr20 57157162 57157436 -14996446 + (TCCA)n Simple_repeat Simple_repeat 1 269 0 345 281 63 103 chr20 57157484 57157760 -14996122 - L1ME LINE L1 -5010 1109 844 1639 205 33 3 chr20 57157760 57158063 -14995819 - AluJb SINE Alu 0 312 1 345 281 63 103 chr20 57158063 57158088 -14995794 - L1ME LINE L1 -5275 844 820 2454 97 0 0 chr20 57158511 57158822 -14995060 - AluSx SINE Alu -1 311 1 1205 198 211 22 chr20 57158957 57159462 -14994420 - L2 LINE L2 0 3313 2715 882 77 0 17 chr20 57209462 57209579 -14944303 - AluSq/x SINE Alu -175 137 23 1852 113 0 0 chr20 57209581 57209820 -14944062 - AluSq SINE Alu -74 239 1 644 265 95 0 chr20 57210733 57210922 -14942960 + MIR SINE MIR 46 252 -10 2101 102 0 3 chr20 57211164 57211447 -14942435 + AluSq SINE Alu 32 313 0 411 262 40 56 chr20 57211513 57211639 -14942243 + MIR SINE MIR 59 182 -80 192 305 149 43 chr20 57211620 57211761 -14942121 - L2 LINE L2 -41 3231 3076 * 252 59 0 0 chr20 57211877 57211911 -14941971 + (CAAAA)n Simple_repeat Simple_repeat 3 36 0 2128 120 3 3 chr20 57212180 57212471 -14941411 + AluSq SINE Alu 1 291 -22 907 249 94 63 chr20 57212486 57212788 -14941094 - L1MC4a LINE L1 -1885 5923 5595 1856 138 3 30 chr20 57212788 57213085 -14940797 - AluJo SINE Alu -1 311 23 907 249 94 63 chr20 57213085 57213324 -14940558 - L1MC4a LINE L1 -2213 5595 5365 445 255 21 21 chr20 57213324 57213469 -14940413 - HAL1 LINE L1 -118 2389 2245 2274 125 6 0 chr20 57213518 57213829 -14940053 - AluSq SINE Alu 0 313 1 406 155 36 12 chr20 57213904 57213988 -14939894 - L1MC1 LINE L1 -2 6331 6246 1727 124 40 0 chr20 57214088 57214337 -14939545 - AluSq SINE Alu -54 259 1 268 170 21 0 chr20 57214709 57214756 -14939126 + MIR SINE MIR 99 146 -62 299 252 277 0 chr20 57214756 57214875 -14939007 - MIR SINE MIR -14 248 97 2389 100 0 0 chr20 57214995 57215304 -14938578 + AluSc SINE Alu 1 309 0 297 260 39 0 chr20 57215493 57215570 -14938312 + MIR SINE MIR 118 197 -65 8923 36 21 2 chr20 57215610 57216661 -14937221 + MER11C LTR ERVK 1 1071 0 774 241 98 38 chr20 57216682 57216946 -14936936 + L1ME1 LINE L1 5808 6096 -70 2283 102 0 26 chr20 57216946 57217251 -14936631 + AluSx SINE Alu 1 297 -15 774 241 98 38 chr20 57217251 57217302 -14936580 + L1ME1 LINE L1 6096 6142 -24 1772 152 4 4 chr20 57217306 57217576 -14936306 - AluJb SINE Alu -10 302 33 318 237 51 0 chr20 57217596 57217655 -14936227 + MIR SINE MIR 23 84 -178 2153 148 0 16 chr20 57217971 57218288 -14935594 - AluJb SINE Alu 0 312 1 1180 156 38 5 chr20 57218295 57218506 -14935376 - MER20 DNA MER1_type -1 218 1 640 196 29 17 chr20 57218514 57218728 -14935154 + MER58 DNA MER1_type 1 2420 0 636 272 67 13 chr20 57218742 57218981 -14934901 - L2 LINE L2 -746 2568 2317 413 291 28 35 chr20 57218974 57219115 -14934767 + MIR SINE MIR 6 145 -117 * 269 285 57 16 chr20 57219185 57219308 -14934574 + MER5A DNA MER1_type 6 133 -56 404 288 0 38 chr20 57219399 57219531 -14934351 - MIR3 SINE MIR -28 180 54 971 161 6 0 chr20 57219887 57220048 -14933834 - MER5B DNA MER1_type -6 172 11 537 227 45 11 chr20 57220059 57220235 -14933647 - MER113 DNA MER1_type? -62 459 278 323 239 103 17 chr20 57220264 57220381 -14933501 - MER113 DNA MER1_type? -330 191 65 323 287 77 21 chr20 57220435 57220578 -14933304 + MLT1K LTR MaLR 185 335 -253 238 194 69 42 chr20 57220590 57220662 -14933220 - MIR SINE MIR -94 114 41 264 196 0 0 chr20 57220811 57220857 -14933025 + MIR SINE MIR 105 150 -112 452 288 0 8 chr20 57220978 57221103 -14932779 + MIR SINE MIR 46 164 -62 22 35 0 0 chr20 57221112 57221141 -14932741 + AT_rich Low_complexity Low_complexity 1 29 0 2312 73 21 0 chr20 57221144 57221432 -14932450 + AluSq SINE Alu 1 294 -19 312 225 28 0 chr20 57222054 57222125 -14931757 - MIR SINE MIR -73 135 63 1981 186 62 19 chr20 57222199 57222668 -14931214 + L1MB8 LINE L1 5689 6177 -1 643 140 0 19 chr20 57222703 57222720 -14931162 - AluJb SINE Alu 0 312 296 2322 105 20 0 chr20 57222720 57223026 -14930856 - AluSx SINE Alu 0 312 1 643 140 0 19 chr20 57223026 57223115 -14930767 - AluJb SINE Alu -16 296 208 281 116 0 0 chr20 57223115 57223158 -14930724 - AluJb SINE Alu -169 133 91 823 281 75 57 chr20 57223291 57223761 -14930121 - L2 LINE L2 -5 3308 2831 770 254 49 108 chr20 57223791 57224264 -14929618 + L2 LINE L2 2827 3271 -1 283 281 9 70 chr20 57224275 57224389 -14929493 - MIR SINE MIR -78 130 24 658 235 25 15 chr20 57224797 57224993 -14928889 + Charlie8 DNA MER1_type 70 267 -2150 268 292 80 0 chr20 57225189 57225302 -14928580 - L2 LINE L2 -232 3040 2919 1598 125 25 7 chr20 57225424 57225584 -14928298 + L1MA8 LINE L1 6006 6175 -116 1936 116 22 0 chr20 57225584 57225859 -14928023 + AluSq SINE Alu 17 297 -16 1598 125 25 7 chr20 57225859 57225979 -14927903 + L1MA8 LINE L1 6175 6291 0 425 247 33 27 chr20 57226023 57226173 -14927709 + L1MC5 LINE L1 7292 7442 -519 2188 133 7 0 chr20 57226353 57226661 -14927221 + AluSx SINE Alu 1 310 -2 1973 64 4 0 chr20 57226750 57226984 -14926898 + AluSq SINE Alu 1 235 -78 335 196 39 20 chr20 57227182 57227284 -14926598 - L1MD3 LINE L1 -10 7985 7882 348 245 145 24 chr20 57227880 57228066 -14925816 + MIR SINE MIR 4 214 -48 2020 126 14 3 chr20 57228066 57228360 -14925522 + AluJo SINE Alu 11 307 -5 348 245 145 24 chr20 57228360 57228378 -14925504 + MIR SINE MIR 214 228 -34 2380 101 0 0 chr20 57229082 57229380 -14924502 + AluSc SINE Alu 1 298 -11 272 295 48 9 chr20 57229469 57229574 -14924308 + Charlie8 DNA MER1_type 1 109 -2308 375 324 19 0 chr20 57230147 57230255 -14923627 + L2 LINE L2 3204 3313 0 2069 137 0 23 chr20 57230772 57231078 -14922804 - AluJb SINE Alu -13 299 1 414 196 0 54 chr20 57231086 57231178 -14922704 + MER82 DNA MER2_type 8 94 -559 248 315 97 24 chr20 57231207 57231372 -14922510 - MIR SINE MIR -74 188 12 983 236 10 0 chr20 57231413 57231621 -14922261 + MER82 DNA MER2_type 444 653 0 2090 113 0 3 chr20 57231700 57232013 -14921869 + AluSx SINE Alu 1 312 0 471 319 43 0 chr20 57232124 57232262 -14921620 - MIR SINE MIR -3 259 116 1223 208 112 3 chr20 57232955 57233258 -14920624 - MLT1K LTR MaLR 0 588 253 610 158 20 20 chr20 57233264 57233365 -14920517 + FRAM SINE Alu 8 108 -68 204 40 0 0 chr20 57233383 57233408 -14920474 + (CAAT)n Simple_repeat Simple_repeat 3 27 0 455 268 24 0 chr20 57233408 57233535 -14920347 - L2 LINE L2 -616 2698 2569 997 162 6 6 chr20 57233635 57233802 -14920080 + AluSq SINE Alu 142 308 -5 1816 147 12 9 chr20 57233865 57234192 -14919690 - L1MB8 LINE L1 -25 6153 5826 466 291 95 6 chr20 57234841 57234999 -14918883 - MIR SINE MIR -74 188 17 1213 280 80 39 chr20 57235248 57235787 -14918095 - MLT1K LTR MaLR -2 586 26 502 204 139 0 chr20 57235849 57235957 -14917925 + MIR3 SINE MIR 65 187 -21 484 225 190 7 chr20 57236985 57237127 -14916755 + MIR SINE MIR 92 259 -3 1988 152 0 26 chr20 57237172 57237501 -14916381 - AluSx SINE Alu 0 312 1 942 189 35 0 chr20 57237552 57237721 -14916161 + MER45A DNA AcHobo 1 175 -3 430 208 195 19 chr20 57237786 57237940 -14915942 + Charlie8 DNA MER1_type 85 265 -2152 256 254 42 14 chr20 57238047 57238118 -14915764 + MIR SINE MIR 146 218 -44 798 286 140 23 chr20 57238354 57238697 -14915185 + L2 LINE L2 2889 3271 -1 284 325 159 19 chr20 57238711 57238868 -14915014 - MIR SINE MIR -68 194 16 650 51 0 0 chr20 57239182 57239260 -14914622 - Alu SINE Alu -14 298 221 21 36 0 0 chr20 57239903 57239931 -14913951 + AT_rich Low_complexity Low_complexity 1 28 0 2203 122 6 10 chr20 57240611 57240923 -14912959 - AluSx SINE Alu -1 311 1 451 289 43 58 chr20 57241937 57242145 -14911737 + L3 LINE CR1 1345 1549 -28 396 0 0 0 chr20 57242159 57242203 -14911679 + (TG)n Simple_repeat Simple_repeat 2 45 0 280 247 0 35 chr20 57243510 57243595 -14910287 + (TGAG)n Simple_repeat Simple_repeat 4 85 0 291 54 0 0 chr20 57244332 57244369 -14909513 + (CA)n Simple_repeat Simple_repeat 2 38 0 815 234 35 77 chr20 57244809 57245070 -14908812 - MER102a DNA MER1_type -1 329 80 590 132 167 18 chr20 57245072 57245186 -14908696 + AluSg SINE Alu 2 132 -178 1956 151 0 25 chr20 57245336 57245653 -14908229 - AluSx SINE Alu -3 309 1 2711 168 90 8 chr20 57245656 57246179 -14907703 - MLT1F1 LTR MaLR 0 567 2 1340 145 0 0 chr20 57246281 57246467 -14907415 + AluSg/x SINE Alu 93 278 -32 684 93 0 0 chr20 57246469 57246566 -14907316 + (GGAA)n Simple_repeat Simple_repeat 2 98 0 294 267 0 23 chr20 57246577 57246645 -14907237 + GA-rich Low_complexity Low_complexity 4 72 -15 2194 119 7 3 chr20 57246645 57246948 -14906934 + AluSq SINE Alu 1 304 -9 294 267 0 23 chr20 57246948 57246959 -14906923 + GA-rich Low_complexity Low_complexity 67 82 0 204 40 0 0 chr20 57246959 57246984 -14906898 + (GGGAA)n Simple_repeat Simple_repeat 5 29 0 297 0 0 0 chr20 57247541 57247574 -14906308 + (TTA)n Simple_repeat Simple_repeat 3 35 0 332 130 26 78 chr20 57247583 57247660 -14906222 + ORSL DNA AcHobo 169 241 -34 260 270 0 0 chr20 57247749 57247823 -14906059 + MIR SINE MIR 63 136 -126 211 306 35 24 chr20 57247841 57247991 -14905891 + MIR SINE MIR 13 207 -55 2110 147 0 0 chr20 57248022 57248314 -14905568 + AluSx SINE Alu 1 292 -20 374 308 7 14 chr20 57248333 57248479 -14905403 + L1ME3A LINE L1 5807 5951 -219 371 367 24 24 chr20 57248562 57248769 -14905113 + L1ME3A LINE L1 5963 6169 -1 206 216 43 158 chr20 57248776 57248793 -14905089 - MIR SINE MIR 0 262 245 1953 139 20 0 chr20 57248793 57249094 -14904788 + AluJb SINE Alu 1 307 -5 206 216 43 158 chr20 57249094 57249215 -14904667 - MIR SINE MIR -17 245 140 197 138 0 0 chr20 57249959 57249988 -14903894 - L2 LINE L2 -18 3295 3267 276 250 16 0 chr20 57250160 57250224 -14903658 - MIR SINE MIR -99 109 45 489 307 85 6 chr20 57250444 57250620 -14903262 + MIR SINE MIR 1 190 -72 1472 212 92 42 chr20 57250638 57250872 -14903010 + L2 LINE L2 2833 3054 -259 2054 134 17 0 chr20 57250872 57251164 -14902718 + AluJb SINE Alu 1 297 -15 1472 212 92 42 chr20 57251164 57251386 -14902496 + L2 LINE L2 3054 3312 -1 262 302 0 0 chr20 57251389 57251452 -14902430 + MIR SINE MIR 200 262 0 353 250 65 19 chr20 57251545 57251652 -14902230 + MIR3 SINE MIR 80 171 -37 468 344 15 5 chr20 57251667 57251862 -14902020 - MIR SINE MIR -14 248 52 254 132 19 75 chr20 57252374 57252427 -14901455 - MIR SINE MIR -10 252 203 302 315 28 19 chr20 57252444 57252552 -14901330 + L2 LINE L2 3167 3275 -38 372 241 104 0 chr20 57252599 57252720 -14901162 - MIR SINE MIR -61 147 40 2063 94 4 11 chr20 57252757 57253062 -14900820 - AluSp SINE Alu 0 320 18 395 287 72 31 chr20 57253590 57253785 -14900097 - MIR SINE MIR -55 207 5 253 235 0 0 chr20 57254131 57254182 -14899700 + MER96B DNA MER1_type? 1 51 -366 2040 105 0 65 chr20 57254193 57254516 -14899366 + AluSx SINE Alu 1 302 -10 898 198 60 17 chr20 57254516 57254748 -14899134 + MER96B DNA MER1_type? 176 417 0 519 241 0 9 chr20 57254748 57254860 -14899022 + MIR SINE MIR 67 177 -85 180 167 0 0 chr20 57254867 57254897 -14898985 + L2 LINE L2 3263 3292 -21 406 236 90 62 chr20 57254975 57255119 -14898763 - MER20B DNA MER1_type -635 148 1 576 195 41 24 chr20 57255120 57255243 -14898639 + MIR SINE MIR 31 155 -107 408 288 80 55 chr20 57255425 57255699 -14898183 + MER102b DNA MER1_type 39 319 -22 885 168 0 0 chr20 57255708 57255839 -14898043 - AluJo SINE Alu -11 301 171 2898 136 37 31 chr20 57255854 57256398 -14897484 - LTR10A LTR ERV1 -62 547 1 1160 150 6 0 chr20 57256442 57256615 -14897267 - AluJo SINE Alu -138 174 1 2045 143 36 0 chr20 57256781 57257082 -14896800 + AluJb SINE Alu 1 312 0 217 174 0 43 chr20 57257279 57257325 -14896557 + GA-rich Low_complexity Low_complexity 1 44 0 243 218 0 0 chr20 57257332 57257387 -14896495 + (TGGA)n Simple_repeat Simple_repeat 2 56 0 339 275 50 25 chr20 57257476 57257596 -14896286 - L2 LINE L2 -4 3268 3146 370 259 27 18 chr20 57257795 57257907 -14895975 + L2 LINE L2 3160 3272 0 1194 66 0 0 chr20 57258301 57258437 -14895445 + AluSx SINE Alu 1 136 -177 277 54 0 0 chr20 57258439 57258476 -14895406 + U5 snRNA snRNA 4 40 -76 1273 156 0 0 chr20 57258476 57258662 -14895220 + AluSx SINE Alu 113 298 -12 601 207 47 99 chr20 57258735 57258948 -14894934 - MLT1K LTR MaLR -22 566 365 1586 82 0 5 chr20 57259003 57259197 -14894685 + AluY SINE Alu 1 193 -118 569 268 45 20 chr20 57259304 57259502 -14894380 - L2 LINE L2 -193 3120 2918 2258 106 0 13 chr20 57260058 57260359 -14893523 - AluSq SINE Alu -16 297 1 361 218 69 0 chr20 57260539 57260626 -14893256 + MIR SINE MIR 72 164 -98 249 246 77 0 chr20 57260725 57260790 -14893092 + MLT1J LTR MaLR 111 180 -331 2305 112 13 0 chr20 57260877 57261180 -14892702 + AluSx SINE Alu 1 307 -5 210 162 0 0 chr20 57261278 57261315 -14892567 - MER5A DNA MER1_type -80 109 73 383 332 59 23 chr20 57261320 57261576 -14892306 - MLT1L LTR MaLR -97 518 254 498 254 25 8 chr20 57261667 57261785 -14892097 - MLT1L LTR MaLR -350 265 146 833 163 11 87 chr20 57261789 57261864 -14892018 + MER5A DNA MER1_type 8 87 -102 2402 103 0 0 chr20 57261864 57262164 -14891718 + AluSg SINE Alu 1 300 -10 833 163 11 87 chr20 57262164 57262272 -14891610 + MER5A DNA MER1_type 87 177 -12 224 283 0 0 chr20 57262274 57262320 -14891562 + MER5B DNA MER1_type 14 59 -119 611 190 4 129 chr20 57262323 57262381 -14891501 + L1ME3 LINE L1 5960 6024 -138 649 179 27 9 chr20 57262381 57262493 -14891389 - MER81 DNA DNA 0 114 1 611 190 4 129 chr20 57262493 57262598 -14891284 + L1ME3 LINE L1 6024 6088 -74 1778 139 7 61 chr20 57262598 57262908 -14890974 + AluJo SINE Alu 1 293 -19 611 190 4 129 chr20 57262908 57262975 -14890907 + L1ME3 LINE L1 6088 6162 0 462 336 0 0 chr20 57262975 57263094 -14890788 + MER5B DNA MER1_type 54 172 -6 379 173 27 0 chr20 57263128 57263203 -14890679 - MER5A DNA MER1_type -80 109 33 2133 104 7 4 chr20 57264161 57264460 -14889422 - AluSx SINE Alu 0 302 3 21 0 0 0 chr20 57264498 57264519 -14889363 + AT_rich Low_complexity Low_complexity 1 21 0 661 162 0 9 chr20 57264565 57264670 -14889212 - AluJb SINE Alu -207 105 2 2134 75 37 34 chr20 57264686 57264981 -14888901 - AluY SINE Alu -15 296 1 824 100 0 0 chr20 57264983 57265093 -14888789 - AluY SINE Alu -15 296 187 264 282 0 0 chr20 57265104 57265117 -14888765 - L1MA10 LINE L1 -88 6246 6234 3330 213 25 20 chr20 57265117 57265929 -14887953 - L1ME1 LINE L1 -92 6074 5259 811 254 78 23 chr20 57266096 57266352 -14887530 + MLT1K LTR MaLR 1 270 -318 471 261 124 29 chr20 57266374 57266615 -14887267 + L2 LINE L2 2990 3253 -60 273 157 0 57 chr20 57266633 57266703 -14887179 - L2 LINE L2 -777 2537 2472 507 254 32 16 chr20 57266757 57266883 -14886999 - MIR3 SINE MIR -75 133 6 1549 226 71 41 chr20 57266960 57267518 -14886364 - MLT1F1 LTR MaLR 0 567 2 1179 248 159 30 chr20 57267520 57267933 -14885949 - L2 LINE L2 -86 3227 2869 2144 101 63 0 chr20 57267933 57268220 -14885662 + AluSx SINE Alu 1 305 -7 1179 248 159 30 chr20 57268220 57268572 -14885310 - L2 LINE L2 -444 2869 2368 23 0 0 0 chr20 57269901 57269924 -14883958 + AT_rich Low_complexity Low_complexity 1 23 0 26 0 0 0 chr20 57270066 57270092 -14883790 + AT_rich Low_complexity Low_complexity 1 26 0 246 301 84 0 chr20 57274721 57274804 -14879078 - MIR3 SINE MIR -41 167 78 977 233 56 14 chr20 57274806 57275021 -14878861 - MER58A DNA MER1_type 0 224 1 577 253 237 5 chr20 57275079 57275277 -14878605 - MIR SINE MIR -1 261 18 841 169 0 0 chr20 57275299 57275429 -14878453 + FLAM_C SINE Alu 1 130 -3 248 331 45 23 chr20 57275531 57275664 -14878218 + L2 LINE L2 3177 3312 -1 197 285 203 19 chr20 57275742 57275900 -14877982 + L2 LINE L2 2695 2881 -433 2012 161 0 10 chr20 57276219 57276529 -14877353 + AluJo SINE Alu 6 312 0 1068 107 13 0 chr20 57276545 57276750 -14877132 + AluSg/x SINE Alu 129 335 0 1026 239 51 41 chr20 57276825 57277089 -14876793 + MIR SINE MIR 2 261 -1 202 259 98 45 chr20 57277959 57278071 -14875811 - MIR SINE MIR -104 158 41 1217 267 58 57 chr20 57278137 57278846 -14875036 - L2 LINE L2 0 3313 2595 309 373 53 13 chr20 57278841 57278991 -14874891 + L3 LINE CR1 1392 1547 -30 * 478 261 35 0 chr20 57279171 57279286 -14874596 + L2 LINE L2 3136 3254 -18 2248 102 31 0 chr20 57279610 57279904 -14873978 - AluSg SINE Alu -7 303 1 1574 246 78 34 chr20 57280250 57280787 -14873095 + MLT1K LTR MaLR 20 580 -8 1917 150 13 29 chr20 57281150 57281464 -14872418 + AluJb SINE Alu 1 309 -3 323 133 0 17 chr20 57281474 57281534 -14872348 + (GAAAA)n Simple_repeat Simple_repeat 2 60 0 901 259 40 26 chr20 57281653 57281881 -14872001 + MIR SINE MIR 32 262 0 237 319 51 58 chr20 57282545 57282683 -14871199 + MIR SINE MIR 35 151 -57 1776 158 11 14 chr20 57282775 57283087 -14870795 - AluJo SINE Alu 0 311 1 1035 149 7 0 chr20 57283305 57283459 -14870423 + FRAM SINE Alu 1 154 -22 181 254 85 0 chr20 57283652 57283711 -14870171 + MIR SINE MIR 27 90 -172 970 144 28 6 chr20 57283896 57284076 -14869806 - MER53 DNA DNA 0 189 6 366 229 38 15 chr20 57285277 57285408 -14868474 + MER113 DNA MER1_type? 1 134 -387 4779 141 18 24 chr20 57285418 57285583 -14868299 + L1MC1 LINE L1 5180 5345 -988 2370 85 0 10 chr20 57285583 57285888 -14867994 + AluSq SINE Alu 1 302 -11 4779 141 18 24 chr20 57285888 57286637 -14867245 + L1MC1 LINE L1 5345 6085 -248 343 115 0 0 chr20 57286737 57286789 -14867093 + Alu SINE Alu 242 293 -9 365 283 124 7 chr20 57286911 57287056 -14866826 - L2 LINE L2 -62 3251 3090 * 372 246 35 26 chr20 57287053 57287167 -14866715 + MIR SINE MIR 140 254 -8 521 165 69 151 chr20 57287281 57287407 -14866475 - Charlie4 DNA MER1_type 0 1961 1859 1734 154 6 65 chr20 57287407 57287731 -14866151 - AluJb SINE Alu -7 305 1 521 165 69 151 chr20 57287731 57287822 -14866060 - Charlie4 DNA MER1_type -102 1859 1762 793 187 16 39 chr20 57287822 57288004 -14865878 + AluJo SINE Alu 118 295 -17 427 206 0 0 chr20 57288015 57288107 -14865775 - Charlie4 DNA MER1_type -1685 276 185 1108 155 0 18 chr20 57288107 57288275 -14865607 - FRAM SINE Alu -19 157 1 500 250 0 0 chr20 57288304 57288416 -14865466 - Charlie4 DNA MER1_type -1810 151 40 495 291 30 18 chr20 57288503 57288668 -14865214 - MER112 DNA MER1_type -86 174 8 805 279 51 17 chr20 57289362 57289599 -14864283 + MIR SINE MIR 2 246 -16 2338 82 3 3 chr20 57289677 57289968 -14863914 + AluSx SINE Alu 2 292 -20 299 211 58 77 chr20 57290031 57290135 -14863747 - MIR SINE MIR -1 261 160 831 188 0 45 chr20 57290231 57290407 -14863475 - MLT1F LTR MaLR 0 542 375 1465 127 5 14 chr20 57290408 57290621 -14863261 + AluJo SINE Alu 2 212 -100 684 268 6 12 chr20 57290643 57290807 -14863075 - MLT1F LTR MaLR -379 163 1 337 316 43 8 chr20 57290808 57290925 -14862957 - MIR SINE MIR -137 125 5 362 279 60 66 chr20 57291037 57291057 -14862825 + MIR SINE MIR 33 52 -210 225 0 0 0 chr20 57291057 57291082 -14862800 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 1818 152 3 21 chr20 57291082 57291365 -14862517 - AluJb SINE Alu -32 280 3 362 279 60 66 chr20 57291365 57291526 -14862356 + MIR SINE MIR 50 214 -48 1886 142 16 30 chr20 57291658 57291961 -14861921 - AluJb SINE Alu -13 299 1 537 103 26 0 chr20 57292563 57292641 -14861241 + MADE1 DNA Mariner 1 80 0 573 230 211 10 chr20 57292741 57292945 -14860937 + MIR SINE MIR 17 261 -1 412 337 30 30 chr20 57292913 57292994 -14860888 + L2 LINE L2 3101 3181 -91 * 2296 123 0 0 chr20 57292994 57293304 -14860578 - AluSx SINE Alu -2 310 1 412 337 30 30 chr20 57293304 57293391 -14860491 + L2 LINE L2 3180 3269 -3 1063 252 130 29 chr20 57293395 57293945 -14859937 - L2 LINE L2 -3 3310 2720 1546 84 48 81 chr20 57294409 57294682 -14859200 + L1PB1 LINE L1 5888 6151 0 485 316 126 0 chr20 57294715 57294905 -14858977 - MIR SINE MIR 0 262 49 384 261 109 10 chr20 57294961 57295137 -14858745 + MIR SINE MIR 23 219 -43 996 264 24 39 chr20 57295152 57295651 -14858231 - MLT1K LTR MaLR -44 544 8 258 152 0 22 chr20 57295657 57295703 -14858179 + L2 LINE L2 3226 3270 -2 * 313 288 126 0 chr20 57295686 57295797 -14858085 + MIR SINE MIR 132 256 -6 737 183 24 6 chr20 57295934 57296103 -14857779 - MER96B DNA MER1_type? 0 417 246 359 233 78 10 chr20 57296215 57296318 -14857564 - MER91C DNA MER1_type -30 110 1 1457 259 14 3 chr20 57296519 57296809 -14857073 - HERVI LTR ERV1 -4666 3119 2823 2171 134 13 0 chr20 57296809 57297114 -14856768 - AluSg SINE Alu -1 309 1 1457 259 14 3 chr20 57297114 57297178 -14856704 - HERVI LTR ERV1 -4962 2823 2761 * 2553 241 60 35 chr20 57297173 57298008 -14855874 - HERVI LTR ERV1 -4361 2288 1433 3373 204 110 86 chr20 57298008 57299293 -14854589 - HERVI LTR ERV1 -5330 1319 5 1734 187 236 5 chr20 57299293 57299737 -14854145 - LTR10B LTR ERV1 0 547 1 929 201 93 16 chr20 57300633 57300827 -14853055 - AluJo SINE Alu -19 293 85 315 248 124 18 chr20 57300827 57300940 -14852942 - FAM SINE Alu -50 125 1 2299 95 10 0 chr20 57301969 57302263 -14851619 - AluY SINE Alu -14 297 1 1596 95 72 5 chr20 57302409 57302631 -14851251 - AluSq SINE Alu -76 237 1 399 288 154 30 chr20 57302649 57302916 -14850966 + MLT1F LTR MaLR 233 532 -10 1418 238 162 43 chr20 57303057 57303724 -14850158 + L2 LINE L2 2327 3064 -249 232 175 95 16 chr20 57303747 57303810 -14850072 - FLAM SINE Alu -2 131 64 532 273 29 12 chr20 57303931 57304103 -14849779 - MLT1K LTR MaLR -292 296 122 1072 191 58 2 chr20 57304280 57304505 -14849377 + MIR SINE MIR 27 261 -1 960 251 125 36 chr20 57304566 57304901 -14848981 + L2 LINE L2 2946 3310 -3 215 292 62 0 chr20 57305406 57305471 -14848411 - MIR SINE MIR -14 248 180 456 290 80 0 chr20 57305510 57305648 -14848234 - L2 LINE L2 -4 3309 3161 2259 115 3 10 chr20 57305654 57305967 -14847915 - AluJb SINE Alu -1 311 1 929 295 127 24 chr20 57306262 57306575 -14847307 + L2 LINE L2 2343 2622 -691 428 0 19 0 chr20 57306575 57306627 -14847255 + (TTTTA)n Simple_repeat Simple_repeat 1 53 0 2247 98 14 0 chr20 57306630 57306915 -14846967 - AluSq SINE Alu -24 289 1 929 295 127 24 chr20 57306915 57307305 -14846577 + L2 LINE L2 2623 3126 -187 254 248 248 0 chr20 57307726 57307843 -14846039 - Charlie8 DNA MER1_type -2227 190 45 459 190 11 0 chr20 57307916 57308029 -14845853 - MIR SINE MIR -49 213 101 329 207 134 0 chr20 57308164 57308246 -14845636 - MIR SINE MIR -141 121 29 296 294 11 22 chr20 57308758 57308850 -14845032 + MIR SINE MIR 63 153 -109 1429 285 26 21 chr20 57308855 57309322 -14844560 - MLT1K LTR MaLR -4 584 116 262 197 224 0 chr20 57309396 57309472 -14844410 + MIR SINE MIR 153 245 -17 389 327 94 6 chr20 57309530 57309689 -14844193 + MIR SINE MIR 27 199 -63 349 307 119 32 chr20 57309718 57309936 -14843946 + L2 LINE L2 2833 3069 -203 * 493 333 13 0 chr20 57309912 57310071 -14843811 + MIR SINE MIR 102 262 0 255 93 0 0 chr20 57310198 57310241 -14843641 + (TCCA)n Simple_repeat Simple_repeat 1 43 0 1248 268 47 30 chr20 57310286 57310457 -14843425 - L2 LINE L2 -2 3311 3144 1652 181 57 0 chr20 57310457 57310738 -14843144 + AluJb SINE Alu 1 297 -15 1248 268 47 30 chr20 57310738 57311141 -14842741 - L2 LINE L2 -169 3144 2722 680 243 46 38 chr20 57311670 57311909 -14841973 - MLT1J LTR MaLR -66 445 205 2246 115 3 3 chr20 57311917 57312222 -14841660 + AluSx SINE Alu 1 305 -7 395 315 74 6 chr20 57312249 57312411 -14841471 - MLT1J LTR MaLR -311 200 28 1310 243 148 14 chr20 57312835 57313282 -14840600 + L2 LINE L2 2790 3276 -37 216 0 0 0 chr20 57313288 57313312 -14840570 + (TGAA)n Simple_repeat Simple_repeat 4 27 0 527 281 44 6 chr20 57313316 57313476 -14840406 - MIR SINE MIR -77 185 20 199 288 51 0 chr20 57313515 57313574 -14840308 - L3 LINE CR1 -178 1399 1338 778 236 87 10 chr20 57313585 57313793 -14840089 - MIR SINE MIR -3 259 36 882 245 6 89 chr20 57313903 57314157 -14839725 - Charlie7 DNA MER1_type -1970 642 423 812 135 0 78 chr20 57314157 57314298 -14839584 - FLAM_C SINE Alu 0 133 4 882 245 6 89 chr20 57314298 57314390 -14839492 - Charlie7 DNA MER1_type -2189 423 325 336 355 90 8 chr20 57314660 57314823 -14839059 - Charlie7 DNA MER1_type -2326 286 97 180 0 0 0 chr20 57314823 57314843 -14839039 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 336 355 90 8 chr20 57314843 57314913 -14838969 - Charlie7 DNA MER1_type -2515 97 34 237 325 12 12 chr20 57315026 57315109 -14838773 + MLT1I LTR MaLR 136 218 -191 624 208 71 33 chr20 57316602 57316785 -14837097 - MLT1G1 LTR MaLR 0 595 406 542 275 67 31 chr20 57316807 57317050 -14836832 - MLT1G1 LTR MaLR -297 298 8 307 331 93 0 chr20 57317710 57317849 -14836033 + MIR3 SINE MIR 39 190 -18 1659 255 36 25 chr20 57318101 57318899 -14834983 - L2 LINE L2 -20 3293 2491 552 241 46 30 chr20 57319080 57319262 -14834620 + MIR SINE MIR 9 200 -62 711 274 87 39 chr20 57320219 57320657 -14833225 - L1MC4a LINE L1 -1674 6134 5676 950 177 6 0 chr20 57320684 57320848 -14833034 + FRAM SINE Alu 1 165 -1 558 233 88 16 chr20 57320924 57321117 -14832765 - L2 LINE L2 -291 3022 2816 214 342 196 0 chr20 57321683 57321867 -14832015 + MIR SINE MIR 15 234 -28 1715 149 57 7 chr20 57321930 57322091 -14831791 - AluJo SINE Alu -17 295 113 234 0 0 0 chr20 57322091 57322117 -14831765 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 1715 149 57 7 chr20 57322117 57322236 -14831646 - AluJo SINE Alu -199 113 1 199 288 15 15 chr20 57322336 57322402 -14831480 - L2 LINE L2 -240 3032 2967 408 320 67 16 chr20 57322482 57322676 -14831206 - L2 LINE L2 -494 2820 2617 578 227 151 0 chr20 57323018 57323140 -14830742 + MIR SINE MIR 59 216 -46 393 270 209 5 chr20 57323140 57323351 -14830531 - MER112 DNA MER1_type 0 256 3 578 227 151 0 chr20 57323351 57323400 -14830482 + MIR SINE MIR 216 256 -6 207 284 45 30 chr20 57323466 57323533 -14830349 - MIR SINE MIR -117 145 78 316 313 14 34 chr20 57324004 57324151 -14829731 + MIR3 SINE MIR 31 174 -34 1621 258 139 15 chr20 57324243 57325140 -14828742 - L2 LINE L2 0 3313 2309 248 297 127 30 chr20 57325400 57325565 -14828317 + L2 LINE L2 2880 3060 -212 493 278 113 16 chr20 57325573 57325767 -14828115 - MIR SINE MIR 0 262 50 209 287 208 20 chr20 57325819 57325909 -14827973 + L2 LINE L2 3152 3264 -8 429 20 0 0 chr20 57325909 57325959 -14827923 + (TGGA)n Simple_repeat Simple_repeat 4 53 0 203 276 17 0 chr20 57325970 57326028 -14827854 + (TAGA)n Simple_repeat Simple_repeat 2 60 0 384 236 45 18 chr20 57326168 57326278 -14827604 - MLT1J LTR MaLR -369 142 30 512 228 44 7 chr20 57326319 57326455 -14827427 + L2 LINE L2 3113 3253 -60 246 233 50 17 chr20 57327032 57327092 -14826790 + MIR SINE MIR 1 62 -200 255 188 0 0 chr20 57327103 57327151 -14826731 + MER58B DNA MER1_type 262 309 -32 304 194 222 28 chr20 57327153 57327261 -14826621 + MIR SINE MIR 80 208 -54 1555 205 30 18 chr20 57327269 57327606 -14826276 + MER58B DNA MER1_type 1 341 0 328 247 50 170 chr20 57327669 57327792 -14826090 - MIR SINE MIR -12 250 178 2262 122 0 0 chr20 57327792 57328096 -14825786 + AluSx SINE Alu 1 304 -8 328 247 50 170 chr20 57328096 57328255 -14825627 - MIR SINE MIR -84 178 2 255 311 44 52 chr20 57328312 57328447 -14825435 + MER5B DNA MER1_type 19 152 -26 626 291 55 15 chr20 57328706 57329007 -14824875 + L2 LINE L2 2692 3002 -311 245 343 52 15 chr20 57329491 57329625 -14824257 - MIR SINE MIR -37 225 87 2618 35 3 13 chr20 57329932 57330242 -14823640 + AluY SINE Alu 1 307 -4 313 310 25 57 chr20 57330268 57330426 -14823456 + MIR SINE MIR 35 187 -75 1156 128 50 46 chr20 57330649 57330867 -14823015 - MER20 DNA MER1_type 0 219 1 372 182 232 0 chr20 57331017 57331116 -14822766 - MIR3 SINE MIR -35 173 52 234 217 22 0 chr20 57331135 57331181 -14822701 + MIR3 SINE MIR 118 164 -44 200 315 87 22 chr20 57331189 57331281 -14822601 + L2 LINE L2 2985 3082 -190 22 35 0 0 chr20 57331425 57331454 -14822428 + AT_rich Low_complexity Low_complexity 1 29 0 351 348 123 0 chr20 57331483 57331621 -14822261 - L2 LINE L2 -1 3271 3117 342 214 12 0 chr20 57331642 57331726 -14822156 + MER96 DNA MER1_type? 1 85 -90 2370 239 57 30 chr20 57331880 57332638 -14821244 - MER20B DNA MER1_type -5 778 1 2104 110 0 3 chr20 57332679 57332991 -14820891 - AluSx SINE Alu 0 311 1 1942 196 48 0 chr20 57333538 57333936 -14819946 + L1MB7 LINE L1 5758 6174 -10 723 286 4 47 chr20 57334178 57334286 -14819596 - MIR SINE MIR 0 262 151 2324 214 25 35 chr20 57334286 57334806 -14819076 + LTR40a LTR ERVL 1 515 -4 723 286 4 47 chr20 57334806 57334931 -14818951 - MIR SINE MIR -111 151 39 818 216 90 5 chr20 57335798 57336047 -14817835 + L2 LINE L2 2794 3062 -251 301 42 21 21 chr20 57336085 57336133 -14817749 + (TA)n Simple_repeat Simple_repeat 2 49 0 2189 142 0 3 chr20 57336331 57336642 -14817240 + AluJb SINE Alu 1 310 -2 252 305 21 11 chr20 57336704 57336799 -14817083 + MER102a DNA MER1_type 232 327 -3 245 265 171 26 chr20 57336914 57337031 -14816851 + MIR SINE MIR 117 250 -12 262 266 64 21 chr20 57337153 57337247 -14816635 - MIR3 SINE MIR -18 190 93 1096 275 67 3 chr20 57337474 57337787 -14816095 + MLT1K LTR MaLR 192 524 -64 201 359 19 19 chr20 57337932 57338038 -14815844 - L2 LINE L2 -469 2845 2740 342 323 20 0 chr20 57338734 57338833 -14815049 - MIR3 SINE MIR -54 154 54 379 331 8 0 chr20 57338835 57338956 -14814926 + L2 LINE L2 3190 3311 -2 424 345 36 6 chr20 57338996 57339161 -14814721 - MIR SINE MIR -60 202 33 3399 150 20 7 chr20 57339294 57339879 -14814003 + L1MB7 LINE L1 5583 6175 -9 456 323 6 19 chr20 57340140 57340298 -14813584 - MIR SINE MIR -28 234 79 203 238 79 0 chr20 57340354 57340417 -14813465 + MIR SINE MIR 69 136 -126 886 157 11 0 chr20 57340845 57341023 -14812859 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 335 275 0 11 chr20 57341024 57341115 -14812767 + (TTCA)n Simple_repeat Simple_repeat 2 91 0 698 336 7 46 chr20 57341115 57341398 -14812484 - L2 LINE L2 0 3272 3001 630 290 73 16 chr20 57341407 57341655 -14812227 - MLT1L LTR MaLR -2 613 352 239 159 14 87 chr20 57341662 57341729 -14812153 - MLT1L LTR MaLR -406 209 148 704 186 93 47 chr20 57341729 57341922 -14811960 + MER20 DNA MER1_type 1 202 -17 225 289 0 0 chr20 57341990 57342042 -14811840 - L2 LINE L2 -219 3053 3002 256 344 53 8 chr20 57342112 57342243 -14811639 + L2 LINE L2 3175 3311 -2 386 327 36 24 chr20 57342354 57342522 -14811360 - MIR3 SINE MIR -15 193 24 592 308 21 52 chr20 57342750 57343039 -14810843 + MER102b DNA MER1_type 35 314 -27 190 206 32 0 chr20 57344330 57344393 -14809489 + CT-rich Low_complexity Low_complexity 3 67 0 988 178 89 31 chr20 57344395 57344654 -14809228 - ORSL DNA AcHobo 0 275 2 193 399 77 0 chr20 57344663 57344806 -14809076 + MIR SINE MIR 59 212 -50 739 206 27 0 chr20 57345179 57345325 -14808557 - MER45A DNA AcHobo -17 161 12 216 265 0 0 chr20 57345428 57345477 -14808405 + L2 LINE L2 3253 3301 -12 711 282 29 25 chr20 57345767 57346012 -14807870 + L2 LINE L2 3061 3306 -7 269 267 13 0 chr20 57346044 57346119 -14807763 + MIR SINE MIR 80 155 -107 4361 130 11 39 chr20 57346535 57347329 -14806553 + L1MB7 LINE L1 5405 6176 -8 860 237 69 62 chr20 57347398 57348031 -14805851 - L2 LINE L2 -88 3225 2539 514 217 0 9 chr20 57348343 57348449 -14805433 + MIR SINE MIR 148 252 -10 2119 143 6 19 chr20 57348457 57348821 -14805061 - L1PA16 LINE L1 -2 6164 5806 1862 126 3 82 chr20 57348824 57349141 -14804741 - AluJo SINE Alu -16 296 5 207 231 26 39 chr20 57349362 57349440 -14804442 - MIR SINE MIR -132 130 54 2008 141 0 3 chr20 57349533 57349857 -14804025 - AluSx SINE Alu 0 323 1 27 49 0 0 chr20 57349866 57349907 -14803975 + AT_rich Low_complexity Low_complexity 1 41 0 229 254 0 60 chr20 57349929 57349996 -14803886 - L1MC4a LINE L1 -1672 6136 6074 528 197 51 51 chr20 57350072 57350250 -14803632 + MLT1J LTR MaLR 3 180 -331 23 0 0 0 chr20 57350380 57350403 -14803479 + AT_rich Low_complexity Low_complexity 1 23 0 352 227 110 39 chr20 57350403 57350557 -14803325 + MLT1J LTR MaLR 253 417 -94 767 333 85 21 chr20 57350631 57351106 -14802776 - L1MC4a LINE L1 -327 5794 5477 276 294 37 28 chr20 57351108 57351217 -14802665 - MIR SINE MIR -139 123 14 338 256 54 54 chr20 57351353 57351482 -14802400 + MIR3 SINE MIR 49 177 -31 712 272 12 0 chr20 57351781 57351950 -14801932 - MIR SINE MIR -76 186 16 925 170 122 0 chr20 57351955 57352143 -14801739 - MER20 DNA MER1_type -5 214 4 2064 153 3 0 chr20 57352196 57352497 -14801385 - AluSx SINE Alu -10 302 1 211 300 120 20 chr20 57352738 57352838 -14801044 + MIR SINE MIR 86 195 -67 387 246 29 52 chr20 57352859 57352994 -14800888 + L1MC4a LINE L1 5734 5742 -389 2337 97 3 3 chr20 57352994 57353292 -14800590 - AluSc SINE Alu -9 300 3 387 246 29 52 chr20 57353292 57353378 -14800504 + L1MC4a LINE L1 5742 5828 -303 319 311 48 0 chr20 57353378 57353481 -14800401 - L2 LINE L2 -6 3307 3200 189 0 0 0 chr20 57353620 57353641 -14800241 + (TTTA)n Simple_repeat Simple_repeat 1 21 0 2067 96 37 7 chr20 57353641 57353913 -14799969 - AluSx SINE Alu -32 280 1 450 285 14 21 chr20 57354034 57354178 -14799704 - L2 LINE L2 -7 3306 3164 1007 238 33 8 chr20 57354353 57354597 -14799285 - MIR SINE MIR 0 262 13 273 344 0 0 chr20 57356488 57356613 -14797269 + (CAGA)n Simple_repeat Simple_repeat 1 125 0 347 20 0 41 chr20 57356649 57356698 -14797184 + (CAGA)n Simple_repeat Simple_repeat 1 47 0 203 328 37 0 chr20 57356701 57356835 -14797047 + (CAGT)n Simple_repeat Simple_repeat 3 141 0 297 0 0 0 chr20 57356953 57356970 -14796912 + (CAGG)n Simple_repeat Simple_repeat 1 50 0 297 0 0 0 chr20 57356970 57357003 -14796879 + (CAGG)n Simple_repeat Simple_repeat 2 34 0 366 23 0 0 chr20 57357376 57357419 -14796463 + (TG)n Simple_repeat Simple_repeat 2 44 0 467 254 96 23 chr20 57358016 57358193 -14795689 + MIR SINE MIR 48 237 -25 190 236 28 42 chr20 57358334 57358406 -14795476 + MIR3 SINE MIR 111 181 -27 604 280 139 49 chr20 57358471 57358918 -14794964 + MLT1K LTR MaLR 84 570 -18 630 251 76 0 chr20 57358969 57359140 -14794742 - MIR SINE MIR -74 188 5 418 172 30 20 chr20 57359238 57359337 -14794545 - MIR3 SINE MIR -9 199 100 702 258 111 25 chr20 57359445 57359689 -14794193 + MLT1K LTR MaLR 43 307 -281 249 241 179 45 chr20 57359668 57359780 -14794102 - MER113 DNA MER1_type? -191 330 204 * 336 176 52 143 chr20 57359891 57359970 -14793912 - MER113 DNA MER1_type? -325 196 111 2421 100 0 0 chr20 57359970 57360281 -14793601 + AluSx SINE Alu 1 311 -1 336 176 52 143 chr20 57360281 57360411 -14793471 - MER113 DNA MER1_type? -410 111 6 205 400 0 0 chr20 57360421 57360511 -14793371 + MIR SINE MIR 33 122 -86 274 250 10 67 chr20 57361196 57361300 -14792582 + MIR SINE MIR 165 262 0 1198 234 19 0 chr20 57361322 57361578 -14792304 - L1ME2 LINE L1 -9 6155 5895 812 307 42 0 chr20 57361895 57362133 -14791749 - MIR SINE MIR -4 258 11 265 39 0 0 chr20 57362262 57362301 -14791581 - MIR SINE MIR -57 151 112 471 211 58 0 chr20 57362378 57362482 -14791400 + L2 LINE L2 3204 3313 0 357 290 0 19 chr20 57362487 57362594 -14791288 - MIR3 SINE MIR -32 176 72 2438 81 7 3 chr20 57363171 57363479 -14790403 + AluY SINE Alu 1 309 -2 1093 199 115 101 chr20 57363508 57363944 -14789938 - LTR16A1 LTR ERVL -15 442 1 1043 116 29 0 chr20 57363984 57364157 -14789725 - L1MA2 LINE L1 0 6304 6127 240 105 0 140 chr20 57364908 57364965 -14788917 + (A)n Simple_repeat Simple_repeat 1 49 0 1604 104 0 0 chr20 57364990 57365201 -14788681 + AluSg/x SINE Alu 89 299 -11 1057 262 45 73 chr20 57365630 57366096 -14787786 + MLT1K LTR MaLR 129 581 -7 276 232 0 0 chr20 57366145 57366201 -14787681 - L2 LINE L2 -2 3311 3256 1389 210 172 14 chr20 57366284 57366930 -14786952 + L2 LINE L2 2574 3313 0 2462 97 0 0 chr20 57367065 57367376 -14786506 + AluSx SINE Alu 1 311 -1 381 278 44 142 chr20 57367800 57367824 -14786058 + L1MEd LINE L1 816 841 -1649 1686 197 33 3 chr20 57367824 57368124 -14785758 + AluJb SINE Alu 1 309 -3 381 278 44 142 chr20 57368124 57368416 -14785466 + L1MEd LINE L1 841 1171 -1319 197 211 19 0 chr20 57368427 57368479 -14785403 + (TGGA)n Simple_repeat Simple_repeat 1 53 0 1016 125 0 0 chr20 57418482 57418618 -14735264 - AluSq/x SINE Alu -176 136 1 2152 143 0 0 chr20 57418687 57418988 -14734894 + AluSx SINE Alu 1 301 -11 298 319 62 7 chr20 57419595 57419739 -14734143 - HAL1 LINE L1 -748 1759 1608 1238 159 0 11 chr20 57419915 57420104 -14733778 + AluJb SINE Alu 114 300 -12 2411 82 0 20 chr20 57420176 57420482 -14733400 - AluSx SINE Alu -12 300 1 319 234 178 9 chr20 57420710 57420817 -14733065 + L2 LINE L2 3147 3271 -1 373 269 39 62 chr20 57420957 57421165 -14732717 - L1ME3A LINE L1 0 6170 5968 407 297 38 16 chr20 57421263 57421448 -14732434 - L1MC5 LINE L1 -446 7515 7327 865 111 0 0 chr20 57421851 57421968 -14731914 + AluSg/x SINE Alu 180 296 -14 527 261 38 90 chr20 57422258 57422379 -14731503 - MER113 DNA MER1_type? -83 438 312 2456 77 0 0 chr20 57422379 57422678 -14731204 - AluSc SINE Alu -1 308 10 527 261 38 90 chr20 57422678 57422794 -14731088 - MER113 DNA MER1_type? -209 312 191 2161 123 3 7 chr20 57422794 57423087 -14730795 - AluSx SINE Alu -20 292 1 2282 127 0 0 chr20 57423087 57423395 -14730487 - AluSg SINE Alu -1 309 2 527 261 38 90 chr20 57423395 57423554 -14730328 - MER113 DNA MER1_type? -328 193 61 531 352 17 13 chr20 57423594 57423824 -14730058 + MIR SINE MIR 15 245 -17 493 272 82 46 chr20 57423806 57424001 -14729881 - MIR SINE MIR -59 203 2 * 669 123 0 0 chr20 57424005 57424111 -14729771 + (TCCA)n Simple_repeat Simple_repeat 4 109 0 344 240 80 10 chr20 57424187 57424287 -14729595 + MIR SINE MIR 49 155 -107 293 299 153 23 chr20 57424402 57424663 -14729219 + L2 LINE L2 2819 3113 -159 449 292 0 21 chr20 57424892 57425036 -14728846 + MIR SINE MIR 105 245 -17 393 244 0 0 chr20 57425083 57425169 -14728713 - MER96 DNA MER1_type? 0 175 90 208 231 77 0 chr20 57425255 57425307 -14728575 + MIR SINE MIR 110 165 -97 522 309 52 48 chr20 57425562 57425811 -14728071 - MIR SINE MIR -11 251 2 569 106 21 0 chr20 57425815 57425909 -14727973 + (TCCA)n Simple_repeat Simple_repeat 2 97 0 671 219 40 35 chr20 57425909 57426110 -14727772 - L2 LINE L2 0 3313 3112 1903 138 0 30 chr20 57426114 57426410 -14727472 + AluJo SINE Alu 1 287 -25 2213 100 24 0 chr20 57426410 57426699 -14727183 + AluSx SINE Alu 1 296 -16 205 138 0 0 chr20 57426701 57426730 -14727152 + (CAG)n Simple_repeat Simple_repeat 1 29 0 813 109 13 15 chr20 57428330 57428567 -14725315 + AluSq SINE Alu 1 305 -8 2163 126 0 0 chr20 57428851 57429165 -14724717 + AluSx SINE Alu 1 314 0 2169 105 14 0 chr20 57429528 57429814 -14724068 + AluSx SINE Alu 1 290 -22 302 243 243 47 chr20 57429982 57430130 -14723752 + MIR SINE MIR 21 197 -65 984 217 85 33 chr20 57430269 57430541 -14723341 + MLT1K LTR MaLR 293 578 -10 559 287 49 6 chr20 57430723 57430744 -14723138 - MIR SINE MIR -82 180 161 830 249 0 0 chr20 57430744 57430921 -14722961 + MER45A DNA AcHobo 1 177 -1 559 287 49 6 chr20 57430921 57431063 -14722819 - MIR SINE MIR -101 161 10 279 157 14 57 chr20 57431172 57431242 -14722640 - LTR67 LTR ERVL -1 556 490 204 198 108 108 chr20 57431578 57431689 -14722193 - MIR SINE MIR -65 143 33 507 220 69 53 chr20 57432181 57432382 -14721500 + MIR SINE MIR 7 198 -10 647 291 193 0 chr20 57432998 57433293 -14720589 - MLT1K LTR MaLR -111 477 126 854 247 95 60 chr20 57433332 57433621 -14720261 + MLT1H LTR MaLR 24 328 -221 207 0 0 0 chr20 57433678 57433701 -14720181 + (A)n Simple_repeat Simple_repeat 1 23 0 570 222 118 74 chr20 57433735 57433784 -14720098 + MIR SINE MIR 41 86 -176 1411 233 42 42 chr20 57433784 57434281 -14719601 - MLT1D LTR MaLR -4 501 5 570 222 118 74 chr20 57434281 57434434 -14719448 + MIR SINE MIR 86 252 -10 1904 140 0 38 chr20 57434457 57434771 -14719111 + AluJb SINE Alu 1 302 -10 291 301 0 48 chr20 57434787 57434890 -14718992 + L2 LINE L2 3200 3297 -16 297 227 0 0 chr20 57434901 57434967 -14718915 + MIR SINE MIR 69 134 -74 253 326 30 30 chr20 57435345 57435477 -14718405 - MIR3 SINE MIR -47 161 30 212 291 12 23 chr20 57435611 57435697 -14718185 - L2 LINE L2 -518 2796 2712 204 232 42 147 chr20 57435703 57435798 -14718084 + MER5A DNA MER1_type 7 91 -98 663 287 24 0 chr20 57435912 57436121 -14717761 + MIR SINE MIR 47 260 -2 477 264 102 37 chr20 57436404 57436493 -14717389 - MIR SINE MIR -17 245 163 1099 212 9 0 chr20 57436493 57436710 -14717172 - MER20 DNA MER1_type 0 219 1 477 264 102 37 chr20 57436710 57436836 -14717046 - MIR SINE MIR -99 163 16 567 255 0 0 chr20 57437110 57437255 -14716627 - L2 LINE L2 -596 2718 2574 289 214 0 0 chr20 57437338 57437394 -14716488 + L2 LINE L2 3256 3311 -2 1057 262 45 73 chr20 57437443 57437909 -14715973 - MLT1K LTR MaLR -7 581 129 1604 95 0 5 chr20 57438338 57438549 -14715333 - AluSc SINE Alu -11 298 89 296 141 0 94 chr20 57438574 57438659 -14715223 + (T)n Simple_repeat Simple_repeat 1 77 0 2212 92 3 11 chr20 57438702 57439023 -14714859 + AluSp SINE Alu 2 320 0 350 241 104 0 chr20 57439060 57439181 -14714701 + MIR SINE MIR 40 171 -61 282 315 28 19 chr20 57439228 57439336 -14714546 - L2 LINE L2 -38 3275 3167 237 132 19 75 chr20 57439353 57439406 -14714476 + MIR SINE MIR 203 252 -10 444 344 15 5 chr20 57439918 57440113 -14713769 + MIR SINE MIR 52 248 -14 331 250 65 19 chr20 57440128 57440235 -14713647 - MIR3 SINE MIR -37 171 80 255 302 0 0 chr20 57440328 57440391 -14713491 - MIR SINE MIR 0 262 200 1357 219 90 39 chr20 57440394 57440616 -14713266 - L2 LINE L2 -1 3312 3103 2068 134 17 0 chr20 57440616 57440908 -14712974 - AluJb SINE Alu -15 297 1 1357 219 90 39 chr20 57440908 57441142 -14712740 - L2 LINE L2 -210 3103 2833 448 307 85 6 chr20 57441160 57441336 -14712546 - MIR SINE MIR -72 190 1 261 250 0 0 chr20 57441556 57441612 -14712270 + MIR SINE MIR 45 100 -108 188 138 0 0 chr20 57441792 57441821 -14712061 + L2 LINE L2 3267 3295 -18 188 216 43 158 chr20 57442565 57442686 -14711196 + MIR SINE MIR 140 245 -17 1991 135 20 0 chr20 57442686 57442989 -14710893 - AluJb SINE Alu -3 309 1 188 216 43 158 chr20 57442989 57443006 -14710876 + MIR SINE MIR 245 262 0 229 369 28 11 chr20 57443041 57443220 -14710662 - L1ME3A LINE L1 -26 6144 5963 393 308 7 14 chr20 57443303 57443449 -14710433 - L1ME3A LINE L1 -219 5951 5807 2113 147 0 0 chr20 57443468 57443760 -14710122 - AluSx SINE Alu -20 292 1 198 255 78 0 chr20 57443890 57443941 -14709941 - MIR SINE MIR -195 67 13 245 270 0 0 chr20 57443959 57444033 -14709849 - MIR SINE MIR -126 136 63 332 130 26 78 chr20 57444122 57444199 -14709683 - ORSL DNA AcHobo -34 241 169 378 0 0 0 chr20 57444208 57444250 -14709632 + (TAA)n Simple_repeat Simple_repeat 3 44 0 204 40 0 0 chr20 57444807 57444832 -14709050 + (TTCCC)n Simple_repeat Simple_repeat 5 29 0 646 186 17 12 chr20 57444832 57444843 -14709039 + CT-rich Low_complexity Low_complexity 1 10 -163 2202 119 7 3 chr20 57444843 57445146 -14708736 - AluSq SINE Alu -9 304 1 646 186 17 12 chr20 57445146 57445306 -14708576 + CT-rich Low_complexity Low_complexity 10 173 0 2059 139 0 0 chr20 57445315 57445595 -14708287 - AluSx SINE Alu -32 280 1 827 234 85 10 chr20 57445693 57445894 -14707988 - MIR SINE MIR 0 262 47 483 204 139 0 chr20 57445913 57446021 -14707861 + L2 LINE L2 3181 3303 -10 430 296 94 30 chr20 57446026 57446073 -14707809 + MER113 DNA MER1_type? 159 202 -319 2288 102 6 13 chr20 57446073 57446386 -14707496 + AluSx SINE Alu 1 311 -1 430 296 94 30 chr20 57446386 57446558 -14707324 + MER113 DNA MER1_type? 202 400 -121 1829 147 0 31 chr20 57446558 57446851 -14707031 + AluJb SINE Alu 23 306 -6 430 296 94 30 chr20 57446851 57446897 -14706985 + MER113 DNA MER1_type? 400 442 -79 1816 147 12 9 chr20 57446914 57447241 -14706641 - L1MB8 LINE L1 -25 6153 5826 466 291 95 6 chr20 57447890 57448048 -14705834 - MIR SINE MIR -74 188 17 1213 280 80 39 chr20 57448297 57448836 -14705046 - MLT1K LTR MaLR -2 586 26 502 204 139 0 chr20 57448898 57449006 -14704876 + MIR3 SINE MIR 65 187 -21 484 225 190 7 chr20 57450034 57450176 -14703706 + MIR SINE MIR 92 259 -3 1988 152 0 26 chr20 57450221 57450550 -14703332 - AluSx SINE Alu 0 312 1 942 189 35 0 chr20 57450601 57450770 -14703112 + MER45A DNA AcHobo 1 175 -3 430 208 195 19 chr20 57450835 57450989 -14702893 + Charlie8 DNA MER1_type 85 265 -2152 256 254 42 14 chr20 57451096 57451167 -14702715 + MIR SINE MIR 146 218 -44 837 289 120 23 chr20 57451403 57451752 -14702130 + L2 LINE L2 2889 3271 -1 284 325 159 19 chr20 57451766 57451923 -14701959 - MIR SINE MIR -68 194 16 2375 97 0 0 chr20 57452237 57452535 -14701347 - AluSx SINE Alu -14 298 1 414 0 0 0 chr20 57452594 57452640 -14701242 + (TG)n Simple_repeat Simple_repeat 2 47 0 806 263 26 0 chr20 57452655 57452845 -14701037 + MIR SINE MIR 34 228 -34 1431 210 48 68 chr20 57452959 57453373 -14700509 - L2 LINE L2 -2 3311 2906 359 233 78 10 chr20 57453505 57453608 -14700274 + MER91C DNA MER1_type 1 110 -30 737 183 24 6 chr20 57453720 57453889 -14699993 + MER96B DNA MER1_type? 246 417 0 313 288 126 0 chr20 57454026 57454137 -14699745 - MIR SINE MIR -6 256 132 258 152 0 22 chr20 57454120 57454166 -14699716 - L2 LINE L2 -2 3270 3226 * 996 264 24 39 chr20 57454172 57454671 -14699211 + MLT1K LTR MaLR 8 544 -44 384 261 109 10 chr20 57454686 57454862 -14699020 - MIR SINE MIR -43 219 23 485 316 126 0 chr20 57454918 57455108 -14698774 + MIR SINE MIR 49 262 0 1546 84 48 81 chr20 57455141 57455414 -14698468 - L1PB1 LINE L1 0 6151 5888 1063 252 130 29 chr20 57455878 57456428 -14697454 + L2 LINE L2 2720 3310 -3 412 337 30 30 chr20 57456432 57456519 -14697363 - L2 LINE L2 -3 3269 3180 2266 126 0 0 chr20 57456519 57456829 -14697053 + AluSx SINE Alu 1 310 -2 412 337 30 30 chr20 57456829 57456910 -14696972 - L2 LINE L2 -91 3181 3101 * 573 230 211 10 chr20 57456878 57457082 -14696800 - MIR SINE MIR -1 261 17 537 103 26 0 chr20 57457182 57457260 -14696622 - MADE1 DNA Mariner 0 80 1 1886 142 16 30 chr20 57457862 57458165 -14695717 + AluJb SINE Alu 1 299 -13 362 279 60 66 chr20 57458297 57458458 -14695424 - MIR SINE MIR -48 214 54 1818 152 3 21 chr20 57458458 57458741 -14695141 + AluJb SINE Alu 3 280 -32 225 0 0 0 chr20 57458741 57458766 -14695116 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 362 279 60 66 chr20 57458766 57458786 -14695096 - MIR SINE MIR -206 56 33 337 316 43 8 chr20 57458898 57459015 -14694867 + MIR SINE MIR 5 125 -137 684 268 6 12 chr20 57459016 57459180 -14694702 + MLT1F LTR MaLR 1 163 -379 1465 127 5 14 chr20 57459202 57459415 -14694467 - AluJo SINE Alu -100 212 2 831 188 0 45 chr20 57459416 57459592 -14694290 + MLT1F LTR MaLR 375 542 0 299 211 58 77 chr20 57459688 57459792 -14694090 + MIR SINE MIR 160 261 -1 2338 82 3 3 chr20 57459855 57460146 -14693736 - AluSx SINE Alu -20 292 2 805 279 51 17 chr20 57460224 57460461 -14693421 - MIR SINE MIR -16 246 2 495 291 30 18 chr20 57461155 57461320 -14692562 + MER112 DNA MER1_type 8 174 -86 500 250 0 0 chr20 57461407 57461519 -14692363 + Charlie4 DNA MER1_type 40 151 -1810 1128 153 0 18 chr20 57461546 57461716 -14692166 + AluJo SINE Alu 127 293 -19 427 206 0 0 chr20 57461716 57461808 -14692074 + Charlie4 DNA MER1_type 185 276 -1685 971 165 6 0 chr20 57461819 57461977 -14691905 - FRAM SINE Alu -17 159 1 622 164 63 139 chr20 57461979 57462090 -14691792 + Charlie4 DNA MER1_type 1742 1827 -134 1734 154 6 65 chr20 57462090 57462414 -14691468 + AluJb SINE Alu 1 305 -7 622 164 63 139 chr20 57462414 57462540 -14691342 + Charlie4 DNA MER1_type 1827 1961 0 372 246 35 26 chr20 57462654 57462768 -14691114 - MIR SINE MIR -8 254 140 365 283 124 7 chr20 57462765 57462910 -14690972 + L2 LINE L2 3090 3251 -62 * 281 192 24 80 chr20 57462989 57463032 -14690850 + MER96B DNA MER1_type? 62 106 -311 2032 133 3 20 chr20 57463032 57463192 -14690690 - AluJb SINE Alu -19 293 139 2362 89 0 3 chr20 57463192 57463483 -14690399 - AluSc SINE Alu -19 290 1 2032 133 3 20 chr20 57463483 57463616 -14690266 - AluJb SINE Alu -173 139 5 281 192 24 80 chr20 57463616 57463697 -14690185 + MER96B DNA MER1_type? 106 179 -238 369 297 36 49 chr20 57463786 57463930 -14689952 - MIR SINE MIR -63 145 10 253 270 18 117 chr20 57463961 57464015 -14689867 + MIR SINE MIR 17 56 -152 2362 95 31 0 chr20 57464015 57464309 -14689573 + AluSx SINE Alu 1 303 -9 253 270 18 117 chr20 57464309 57464365 -14689517 + MIR SINE MIR 56 116 -92 1059 338 30 2 chr20 57464440 57464839 -14689043 - L2 LINE L2 -401 2913 2504 747 255 60 41 chr20 57464839 57465115 -14688767 + L1MC4a LINE L1 5687 5971 -1837 384 22 0 0 chr20 57465115 57465160 -14688722 + (TG)n Simple_repeat Simple_repeat 2 46 0 747 255 60 41 chr20 57465160 57465197 -14688685 + L1MC4a LINE L1 5971 6006 -1802 1109 170 35 0 chr20 57465289 57465489 -14688393 + MER20 DNA MER1_type 7 213 -6 2161 117 27 0 chr20 57465516 57465815 -14688067 + AluSx SINE Alu 1 307 -5 453 103 0 0 chr20 57465815 57465883 -14687999 + (GA)n Simple_repeat Simple_repeat 1 68 0 949 204 6 0 chr20 57466054 57466230 -14687652 + AluJo SINE Alu 124 300 -12 2737 166 90 8 chr20 57466303 57466826 -14687056 + MLT1F1 LTR MaLR 2 567 0 2018 152 0 7 chr20 57466829 57467131 -14686751 + AluSx SINE Alu 1 300 -12 590 132 167 18 chr20 57467295 57467409 -14686473 - AluSg SINE Alu -178 132 2 815 234 35 77 chr20 57467411 57467672 -14686210 + MER102a DNA MER1_type 80 329 -1 312 27 0 0 chr20 57468112 57468149 -14685733 + (TG)n Simple_repeat Simple_repeat 2 38 0 280 247 0 35 chr20 57468886 57468971 -14684911 + (CTCA)n Simple_repeat Simple_repeat 4 85 0 396 0 0 0 chr20 57470278 57470322 -14683560 + (CA)n Simple_repeat Simple_repeat 2 45 0 451 289 43 58 chr20 57470336 57470544 -14683338 - L3 LINE CR1 -28 1549 1345 2203 122 6 10 chr20 57471558 57471870 -14682012 + AluSx SINE Alu 1 311 -1 21 36 0 0 chr20 57472550 57472578 -14681304 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr20 57474378 57474401 -14679481 + AT_rich Low_complexity Low_complexity 1 23 0 26 0 0 0 chr20 57474543 57474569 -14679313 + AT_rich Low_complexity Low_complexity 1 26 0 246 301 84 0 chr20 57479197 57479280 -14674602 - MIR3 SINE MIR -41 167 78 977 233 56 14 chr20 57479282 57479497 -14674385 - MER58A DNA MER1_type 0 224 1 577 253 237 5 chr20 57479555 57479753 -14674129 - MIR SINE MIR -1 261 18 864 161 0 0 chr20 57479775 57479905 -14673977 + FLAM_C SINE Alu 1 130 -3 248 331 45 23 chr20 57480007 57480140 -14673742 + L2 LINE L2 3177 3312 -1 197 285 203 19 chr20 57480218 57480376 -14673506 + L2 LINE L2 2695 2881 -433 2012 161 0 10 chr20 57480695 57481005 -14672877 + AluJo SINE Alu 6 312 0 1101 105 13 0 chr20 57481020 57481221 -14672661 + AluSg/x SINE Alu 129 331 0 1006 244 38 27 chr20 57481296 57481560 -14672322 + MIR SINE MIR 2 261 -1 232 333 16 48 chr20 57481884 57482010 -14671872 + L2 LINE L2 2986 3107 -165 261 182 0 0 chr20 57482043 57482098 -14671784 + (TG)n Simple_repeat Simple_repeat 1 55 0 309 327 35 9 chr20 57482108 57482221 -14671661 + L2 LINE L2 3146 3261 -11 1925 165 0 3 chr20 57482276 57482573 -14671309 - AluJo SINE Alu -10 302 7 282 289 67 22 chr20 57482582 57482672 -14671210 - L2 LINE L2 -15 3298 3205 2291 113 0 7 chr20 57482866 57483175 -14670707 + AluSq SINE Alu 1 307 -6 1882 134 72 7 chr20 57483411 57483701 -14670181 - AluJo SINE Alu -1 311 3 365 204 87 60 chr20 57483949 57484066 -14669816 + MIR SINE MIR 30 148 -62 1085 206 23 5 chr20 57484070 57484284 -14669598 + MER20 DNA MER1_type 2 219 0 297 253 25 13 chr20 57484922 57485001 -14668881 + MIR SINE MIR 71 150 -112 452 288 0 8 chr20 57485122 57485247 -14668635 + MIR SINE MIR 46 164 -62 22 35 0 0 chr20 57485256 57485285 -14668597 + AT_rich Low_complexity Low_complexity 1 29 0 2312 73 21 0 chr20 57485288 57485576 -14668306 + AluSq SINE Alu 1 294 -19 312 225 28 0 chr20 57486198 57486269 -14667613 - MIR SINE MIR -73 135 63 1981 186 62 19 chr20 57486343 57486812 -14667070 + L1MB8 LINE L1 5689 6177 -1 643 140 0 19 chr20 57486847 57486864 -14667018 - AluJb SINE Alu 0 312 296 2333 102 20 0 chr20 57486864 57487169 -14666713 - AluSx SINE Alu -1 311 1 643 140 0 19 chr20 57487169 57487258 -14666624 - AluJb SINE Alu -16 296 208 281 116 0 0 chr20 57487258 57487301 -14666581 - AluJb SINE Alu -169 133 91 823 281 75 57 chr20 57487434 57487904 -14665978 - L2 LINE L2 -5 3308 2831 776 256 49 108 chr20 57487934 57488407 -14665475 + L2 LINE L2 2827 3271 -1 283 281 9 70 chr20 57488418 57488532 -14665350 - MIR SINE MIR -78 130 24 658 235 25 15 chr20 57488940 57489136 -14664746 + Charlie8 DNA MER1_type 70 267 -2150 280 290 30 20 chr20 57489346 57489446 -14664436 - L2 LINE L2 -253 3019 2919 856 197 56 2 chr20 57489586 57489845 -14664037 + MLT1J LTR MaLR 5 316 -195 233 147 0 0 chr20 57489861 57489895 -14663987 + MER58A DNA MER1_type 191 224 0 712 320 76 48 chr20 57489983 57490417 -14663465 + L2 LINE L2 2825 3270 -2 270 297 27 0 chr20 57490418 57490492 -14663390 - MIR SINE MIR -70 192 117 2299 111 20 0 chr20 57490535 57490841 -14663041 + AluSx SINE Alu 1 312 0 237 325 12 12 chr20 57491942 57492025 -14661857 - MLT1I LTR MaLR -191 218 136 336 355 90 8 chr20 57492138 57492208 -14661674 + Charlie7 DNA MER1_type 34 97 -2515 180 0 0 0 chr20 57492208 57492228 -14661654 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 336 355 90 8 chr20 57492228 57492391 -14661491 + Charlie7 DNA MER1_type 97 286 -2326 882 245 6 89 chr20 57492661 57492753 -14661129 + Charlie7 DNA MER1_type 325 423 -2189 812 135 0 78 chr20 57492753 57492894 -14660988 + FLAM_C SINE Alu 4 133 0 882 245 6 89 chr20 57492894 57493148 -14660734 + Charlie7 DNA MER1_type 423 642 -1970 765 240 87 10 chr20 57493258 57493466 -14660416 + MIR SINE MIR 36 259 -3 199 288 51 0 chr20 57493477 57493536 -14660346 + L3 LINE CR1 1338 1399 -178 527 281 44 6 chr20 57493575 57493735 -14660147 + MIR SINE MIR 20 185 -77 216 0 0 0 chr20 57493739 57493763 -14660119 + (TTCA)n Simple_repeat Simple_repeat 4 27 0 1310 243 148 14 chr20 57493769 57494216 -14659666 - L2 LINE L2 -37 3276 2790 395 315 74 6 chr20 57494640 57494802 -14659080 + MLT1J LTR MaLR 28 200 -311 2246 115 3 3 chr20 57494829 57495134 -14658748 - AluSx SINE Alu -7 305 1 680 243 46 38 chr20 57495142 57495381 -14658501 + MLT1J LTR MaLR 205 445 -66 1248 268 47 30 chr20 57495910 57496313 -14657569 + L2 LINE L2 2722 3144 -169 1652 181 57 0 chr20 57496313 57496594 -14657288 - AluJb SINE Alu -15 297 1 1248 268 47 30 chr20 57496594 57496765 -14657117 + L2 LINE L2 3144 3311 -2 255 93 0 0 chr20 57496810 57496853 -14657029 + (TGGA)n Simple_repeat Simple_repeat 1 43 0 493 333 13 0 chr20 57496980 57497139 -14656743 - MIR SINE MIR 0 262 102 349 307 119 32 chr20 57497115 57497333 -14656549 - L2 LINE L2 -203 3069 2833 * 389 327 94 6 chr20 57497362 57497521 -14656361 - MIR SINE MIR -63 199 27 262 197 224 0 chr20 57497579 57497655 -14656227 - MIR SINE MIR -17 245 153 1429 285 26 21 chr20 57497729 57498196 -14655686 + MLT1K LTR MaLR 116 584 -4 296 294 11 22 chr20 57498201 57498293 -14655589 - MIR SINE MIR -109 153 63 329 207 134 0 chr20 57498805 57498887 -14654995 + MIR SINE MIR 29 121 -141 459 190 11 0 chr20 57499022 57499135 -14654747 + MIR SINE MIR 101 213 -49 254 248 248 0 chr20 57499208 57499325 -14654557 + Charlie8 DNA MER1_type 45 190 -2227 929 295 127 24 chr20 57499746 57500136 -14653746 - L2 LINE L2 -187 3126 2778 2247 98 14 0 chr20 57500136 57500421 -14653461 + AluSq SINE Alu 1 289 -24 428 0 19 0 chr20 57500424 57500476 -14653406 + (TAAAA)n Simple_repeat Simple_repeat 1 53 0 929 295 127 24 chr20 57500476 57500789 -14653093 - L2 LINE L2 -536 2777 2343 2259 115 3 10 chr20 57501084 57501397 -14652485 + AluJb SINE Alu 1 311 -1 456 290 80 0 chr20 57501403 57501541 -14652341 + L2 LINE L2 3161 3309 -4 215 292 62 0 chr20 57501580 57501645 -14652237 + MIR SINE MIR 180 248 -14 960 251 125 36 chr20 57502150 57502485 -14651397 - L2 LINE L2 -3 3310 2946 1072 191 58 2 chr20 57502546 57502771 -14651111 - MIR SINE MIR -1 261 27 1021 232 93 80 chr20 57502948 57503117 -14650765 + MLT1K LTR MaLR 122 287 -301 2190 100 0 4 chr20 57503117 57503431 -14650451 - AluSc SINE Alu 0 313 1 1021 232 93 80 chr20 57503431 57503699 -14650183 + MLT1K LTR MaLR 287 566 -22 1273 156 0 0 chr20 57503772 57503958 -14649924 - AluSx SINE Alu -12 300 115 277 54 0 0 chr20 57503958 57503995 -14649887 - U5 snRNA snRNA -76 40 4 1194 66 0 0 chr20 57503997 57504133 -14649749 - AluSx SINE Alu -177 136 1 370 259 27 18 chr20 57504527 57504639 -14649243 - L2 LINE L2 0 3272 3160 339 275 50 25 chr20 57504838 57504958 -14648924 + L2 LINE L2 3146 3268 -4 243 218 0 0 chr20 57505047 57505102 -14648780 + (TCCA)n Simple_repeat Simple_repeat 2 56 0 217 174 0 43 chr20 57505109 57505155 -14648727 + CT-rich Low_complexity Low_complexity 1 44 0 2045 143 36 0 chr20 57505353 57505654 -14648228 - AluJb SINE Alu 0 312 1 1160 150 6 0 chr20 57505820 57505993 -14647889 + AluJo SINE Alu 1 174 -138 2935 136 35 31 chr20 57506037 57506582 -14647300 + LTR10A LTR ERV1 1 547 -62 904 153 0 0 chr20 57506597 57506728 -14647154 + AluJo SINE Alu 171 301 -11 408 288 80 55 chr20 57506737 57507011 -14646871 - MER102b DNA MER1_type -22 319 39 576 195 41 24 chr20 57507193 57507316 -14646566 - MIR SINE MIR -107 155 31 406 236 90 62 chr20 57507317 57507461 -14646421 + MER20B DNA MER1_type 1 148 -635 180 167 0 0 chr20 57507539 57507569 -14646313 - L2 LINE L2 -21 3292 3263 519 241 0 9 chr20 57507576 57507688 -14646194 - MIR SINE MIR -85 177 67 898 198 60 17 chr20 57507688 57507920 -14645962 - MER96B DNA MER1_type? 0 417 176 2040 105 0 65 chr20 57507920 57508243 -14645639 - AluSx SINE Alu -10 302 1 253 235 0 0 chr20 57508254 57508305 -14645577 - MER96B DNA MER1_type? -366 51 1 395 287 72 31 chr20 57508651 57508846 -14645036 + MIR SINE MIR 5 207 -55 2105 110 0 3 chr20 57509525 57509837 -14644045 + AluSx SINE Alu 1 311 0 2370 239 57 30 chr20 57509878 57510636 -14643246 + MER20B DNA MER1_type 1 778 -5 342 214 12 0 chr20 57510790 57510874 -14643008 - MER96B DNA MER1_type? -90 85 1 351 348 123 0 chr20 57510895 57511033 -14642849 + L2 LINE L2 3117 3271 -1 22 35 0 0 chr20 57511062 57511091 -14642791 + AT_rich Low_complexity Low_complexity 1 29 0 200 315 87 22 chr20 57511235 57511327 -14642555 - L2 LINE L2 -190 3082 2985 234 217 22 0 chr20 57511335 57511381 -14642501 - MIR3 SINE MIR -44 164 118 372 182 232 0 chr20 57511400 57511499 -14642383 + MIR3 SINE MIR 52 173 -35 1137 133 50 46 chr20 57511649 57511867 -14642015 + MER20 DNA MER1_type 1 219 0 340 312 25 51 chr20 57512090 57512247 -14641635 - MIR SINE MIR -75 187 35 2628 35 3 13 chr20 57512273 57512584 -14641298 - AluY SINE Alu -3 308 1 236 351 52 15 chr20 57512891 57513025 -14640857 + MIR SINE MIR 87 225 -37 626 291 55 15 chr20 57513509 57513810 -14640072 - L2 LINE L2 -311 3002 2692 255 311 44 52 chr20 57514069 57514204 -14639678 - MER5B DNA MER1_type -26 152 19 328 247 50 170 chr20 57514261 57514420 -14639462 + MIR SINE MIR 2 114 -148 2262 122 0 0 chr20 57514420 57514724 -14639158 - AluSx SINE Alu -8 304 1 328 247 50 170 chr20 57514724 57514847 -14639035 + MIR SINE MIR 114 250 -12 1555 205 30 18 chr20 57514910 57515247 -14638635 - MER58B DNA MER1_type 0 341 1 304 194 222 28 chr20 57515255 57515363 -14638519 - MIR SINE MIR -54 208 80 255 188 0 0 chr20 57515365 57515413 -14638469 - MER58B DNA MER1_type -32 309 262 246 233 50 17 chr20 57515424 57515484 -14638398 - MIR SINE MIR -200 62 1 512 228 44 7 chr20 57516061 57516197 -14637685 - L2 LINE L2 -60 3253 3113 384 236 45 18 chr20 57516238 57516348 -14637534 + MLT1J LTR MaLR 30 142 -369 203 276 17 0 chr20 57516488 57516546 -14637336 + (TCTA)n Simple_repeat Simple_repeat 2 60 0 429 20 0 0 chr20 57516557 57516607 -14637275 + (TCCA)n Simple_repeat Simple_repeat 4 53 0 209 287 208 20 chr20 57516607 57516697 -14637185 - L2 LINE L2 -8 3264 3152 493 278 113 16 chr20 57516749 57516943 -14636939 + MIR SINE MIR 50 262 0 248 297 127 30 chr20 57516951 57517116 -14636766 - L2 LINE L2 -212 3060 2880 1636 257 139 15 chr20 57517376 57518273 -14635609 + L2 LINE L2 2309 3313 0 316 313 14 34 chr20 57518365 57518512 -14635370 - MIR3 SINE MIR -34 174 31 207 284 45 30 chr20 57518983 57519050 -14634832 + MIR SINE MIR 78 145 -117 576 227 151 0 chr20 57519116 57519165 -14634717 - MIR SINE MIR -6 256 216 363 269 208 9 chr20 57519165 57519377 -14634505 + MER112 DNA MER1_type 3 256 0 576 227 151 0 chr20 57519377 57519499 -14634383 - MIR SINE MIR -46 216 59 408 320 67 16 chr20 57519841 57520035 -14633847 + L2 LINE L2 2617 2820 -494 199 288 15 15 chr20 57520115 57520181 -14633701 + L2 LINE L2 2967 3032 -240 1715 149 57 7 chr20 57520281 57520400 -14633482 + AluJo SINE Alu 1 113 -199 234 0 0 0 chr20 57520400 57520426 -14633456 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 1715 149 57 7 chr20 57520426 57520587 -14633295 + AluJo SINE Alu 113 295 -17 216 342 196 0 chr20 57520650 57520834 -14633048 - MIR SINE MIR -28 234 15 593 232 82 16 chr20 57521400 57521594 -14632288 + L2 LINE L2 2816 3022 -291 925 189 6 0 chr20 57521670 57521834 -14632048 - FRAM SINE Alu -1 165 1 711 274 87 39 chr20 57521861 57522299 -14631583 + L1MC4a LINE L1 5676 6134 -1674 552 241 46 30 chr20 57523256 57523438 -14630444 - MIR SINE MIR -62 200 9 1659 255 36 25 chr20 57523619 57524417 -14629465 + L2 LINE L2 2491 3293 -20 307 331 93 0 chr20 57524669 57524808 -14629074 - MIR3 SINE MIR -18 190 39 541 275 67 31 chr20 57525468 57525711 -14628171 + MLT1G1 LTR MaLR 8 298 -297 624 208 71 33 chr20 57525733 57525916 -14627966 + MLT1G1 LTR MaLR 406 595 0 899 178 0 0 chr20 57526420 57526566 -14627316 + FRAM SINE Alu 1 146 -30 2315 120 0 0 chr20 57526566 57526865 -14627017 - AluSx SINE Alu -13 299 1 1942 196 48 0 chr20 57527174 57527572 -14626310 + L1MB7 LINE L1 5758 6174 -10 723 286 4 47 chr20 57527814 57527922 -14625960 - MIR SINE MIR 0 262 151 2308 215 25 35 chr20 57527922 57528442 -14625440 + LTR40a LTR ERVL 1 515 -4 723 286 4 47 chr20 57528442 57528567 -14625315 - MIR SINE MIR -111 151 39 818 216 90 5 chr20 57529434 57529683 -14624199 + L2 LINE L2 2794 3062 -251 198 49 49 24 chr20 57529721 57529762 -14624120 + (TA)n Simple_repeat Simple_repeat 2 43 0 2201 141 0 3 chr20 57529960 57530273 -14623609 + AluJb SINE Alu 1 312 0 252 305 21 11 chr20 57530332 57530427 -14623455 + MER102b DNA MER1_type 243 338 -3 245 265 171 26 chr20 57530541 57530658 -14623224 + MIR SINE MIR 117 250 -12 262 266 64 21 chr20 57530780 57530874 -14623008 - MIR3 SINE MIR -18 190 93 1049 281 67 3 chr20 57531101 57531414 -14622468 + MLT1K LTR MaLR 192 524 -64 201 359 19 19 chr20 57531559 57531665 -14622217 - L2 LINE L2 -469 2845 2740 342 323 20 0 chr20 57532361 57532460 -14621422 - MIR3 SINE MIR -54 154 54 379 331 8 0 chr20 57532462 57532583 -14621299 + L2 LINE L2 3190 3311 -2 424 345 36 6 chr20 57532623 57532788 -14621094 - MIR SINE MIR -60 202 33 3412 149 20 7 chr20 57532921 57533506 -14620376 + L1MB7 LINE L1 5583 6175 -9 456 323 6 19 chr20 57533767 57533925 -14619957 - MIR SINE MIR -28 234 79 203 238 79 0 chr20 57533981 57534044 -14619838 + MIR SINE MIR 69 136 -126 914 162 6 0 chr20 57534472 57534651 -14619231 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 335 275 0 11 chr20 57534652 57534743 -14619139 + (TTCA)n Simple_repeat Simple_repeat 2 91 0 698 336 7 46 chr20 57534743 57535026 -14618856 - L2 LINE L2 0 3272 3001 630 290 73 16 chr20 57535035 57535283 -14618599 - MLT1L LTR MaLR -2 613 352 239 159 14 87 chr20 57535290 57535357 -14618525 - MLT1L LTR MaLR -406 209 148 704 186 93 47 chr20 57535357 57535550 -14618332 + MER20 DNA MER1_type 1 202 -17 225 289 0 0 chr20 57535618 57535670 -14618212 - L2 LINE L2 -219 3053 3002 256 344 53 8 chr20 57535740 57535871 -14618011 + L2 LINE L2 3175 3311 -2 386 327 36 24 chr20 57535982 57536150 -14617732 - MIR3 SINE MIR -15 193 24 537 308 21 52 chr20 57536378 57536667 -14617215 + MER102b DNA MER1_type 35 314 -27 190 206 32 0 chr20 57537958 57538021 -14615861 + CT-rich Low_complexity Low_complexity 3 67 0 1055 178 89 31 chr20 57538023 57538282 -14615600 - ORSL DNA AcHobo 0 275 2 204 392 77 0 chr20 57538291 57538434 -14615448 + MIR SINE MIR 59 212 -50 701 206 27 0 chr20 57538807 57538953 -14614929 - MER45A DNA AcHobo -17 161 12 226 265 0 0 chr20 57539056 57539105 -14614777 + L2 LINE L2 3253 3301 -12 743 278 33 29 chr20 57539395 57539640 -14614242 + L2 LINE L2 3061 3306 -7 288 249 45 0 chr20 57539672 57539780 -14614102 + MIR SINE MIR 80 150 -58 4613 128 11 39 chr20 57540163 57540957 -14612925 + L1MB7 LINE L1 5405 6176 -8 947 236 76 59 chr20 57541026 57541659 -14612223 - L2 LINE L2 -88 3225 2539 534 217 0 9 chr20 57541971 57542077 -14611805 + MIR SINE MIR 148 252 -10 2244 143 6 19 chr20 57542085 57542449 -14611433 - L1PA16 LINE L1 -2 6164 5806 1849 126 3 82 chr20 57542452 57542769 -14611113 - AluJo SINE Alu -16 296 5 228 231 26 39 chr20 57542990 57543068 -14610814 - MIR SINE MIR -132 130 54 2022 140 0 3 chr20 57543161 57543484 -14610398 - AluSx SINE Alu 0 322 1 27 49 0 0 chr20 57543493 57543534 -14610348 + AT_rich Low_complexity Low_complexity 1 41 0 506 197 51 51 chr20 57543699 57543877 -14610005 + MLT1J LTR MaLR 3 180 -331 23 0 0 0 chr20 57544007 57544030 -14609852 + AT_rich Low_complexity Low_complexity 1 23 0 331 227 110 39 chr20 57544030 57544184 -14609698 + MLT1J LTR MaLR 253 417 -94 703 319 90 17 chr20 57544258 57544714 -14609168 - L1MC4a LINE L1 -327 5794 5494 302 294 37 28 chr20 57544735 57544844 -14609038 - MIR SINE MIR -139 123 14 343 230 52 89 chr20 57544974 57545109 -14608773 + MIR3 SINE MIR 48 177 -31 755 265 92 0 chr20 57545381 57545577 -14608305 - MIR SINE MIR -33 229 16 900 175 116 0 chr20 57545582 57545771 -14608111 - MER20 DNA MER1_type -5 214 4 2066 152 3 0 chr20 57545824 57546126 -14607756 - AluSx SINE Alu -9 303 1 230 300 120 20 chr20 57546367 57546467 -14607415 + MIR SINE MIR 86 195 -67 387 246 29 52 chr20 57546488 57546623 -14607259 + L1MC4a LINE L1 5734 5742 -389 2337 97 3 3 chr20 57546623 57546921 -14606961 - AluSc SINE Alu -9 300 3 387 246 29 52 chr20 57546921 57547007 -14606875 + L1MC4a LINE L1 5742 5828 -303 341 311 48 0 chr20 57547007 57547110 -14606772 - L2 LINE L2 -6 3307 3200 189 0 0 0 chr20 57547249 57547270 -14606612 + (TTTA)n Simple_repeat Simple_repeat 1 21 0 2067 96 37 7 chr20 57547270 57547542 -14606340 - AluSx SINE Alu -32 280 1 450 285 14 21 chr20 57547663 57547807 -14606075 - L2 LINE L2 -7 3306 3164 1007 238 33 8 chr20 57547982 57548226 -14605656 - MIR SINE MIR 0 262 13 273 344 0 0 chr20 57550117 57550242 -14603640 + (CAGA)n Simple_repeat Simple_repeat 1 125 0 347 20 0 41 chr20 57550278 57550327 -14603555 + (CAGA)n Simple_repeat Simple_repeat 1 47 0 203 328 37 0 chr20 57550330 57550464 -14603418 + (CAGT)n Simple_repeat Simple_repeat 3 141 0 297 0 0 0 chr20 57550582 57550599 -14603283 + (CAGG)n Simple_repeat Simple_repeat 1 50 0 297 0 0 0 chr20 57550599 57550632 -14603250 + (CAGG)n Simple_repeat Simple_repeat 2 34 0 366 23 0 0 chr20 57551005 57551048 -14602834 + (TG)n Simple_repeat Simple_repeat 2 44 0 467 254 96 23 chr20 57551645 57551822 -14602060 + MIR SINE MIR 48 237 -25 190 236 28 42 chr20 57551963 57552035 -14601847 + MIR3 SINE MIR 111 181 -27 604 280 139 49 chr20 57552100 57552547 -14601335 + MLT1K LTR MaLR 84 570 -18 630 251 76 0 chr20 57552598 57552769 -14601113 - MIR SINE MIR -74 188 5 418 172 30 20 chr20 57552867 57552966 -14600916 - MIR3 SINE MIR -9 199 100 702 258 111 25 chr20 57553074 57553318 -14600564 + MLT1K LTR MaLR 43 307 -281 235 250 179 45 chr20 57553297 57553409 -14600473 - MER113 DNA MER1_type? -191 330 204 * 336 176 52 143 chr20 57553520 57553599 -14600283 - MER113 DNA MER1_type? -325 196 111 2421 100 0 0 chr20 57553599 57553910 -14599972 + AluSx SINE Alu 1 311 -1 336 176 52 143 chr20 57553910 57554040 -14599842 - MER113 DNA MER1_type? -410 111 6 205 400 0 0 chr20 57554050 57554140 -14599742 + MIR SINE MIR 33 122 -86 274 250 10 67 chr20 57554825 57554929 -14598953 + MIR SINE MIR 165 262 0 1198 234 19 0 chr20 57554951 57555207 -14598675 - L1ME2 LINE L1 -9 6155 5895 812 307 42 0 chr20 57555524 57555762 -14598120 - MIR SINE MIR -4 258 11 265 39 0 0 chr20 57555891 57555930 -14597952 - MIR SINE MIR -57 151 112 471 211 58 0 chr20 57556007 57556111 -14597771 + L2 LINE L2 3204 3313 0 357 290 0 19 chr20 57556116 57556223 -14597659 - MIR3 SINE MIR -32 176 72 2462 75 7 3 chr20 57556800 57557108 -14596774 + AluY SINE Alu 1 309 -2 1093 199 115 101 chr20 57557137 57557573 -14596309 - LTR16A1 LTR ERVL -15 442 1 1043 116 29 0 chr20 57557613 57557786 -14596096 - L1MA2 LINE L1 0 6304 6127 218 234 0 0 chr20 57558469 57558516 -14595366 - MIR SINE MIR -66 142 96 454 273 123 71 chr20 57558516 57558714 -14595168 - L2 LINE L2 -5 3308 3085 2251 96 0 17 chr20 57558714 57559015 -14594867 + AluSx SINE Alu 1 296 -16 454 273 123 71 chr20 57559015 57559142 -14594740 - L2 LINE L2 -228 3085 2966 741 236 129 4 chr20 57559184 57559425 -14594457 - L2 LINE L2 -469 2845 2575 2154 148 0 16 chr20 57559432 57559749 -14594133 - AluJb SINE Alu 0 312 1 1097 156 38 5 chr20 57559756 57559967 -14593915 - MER20 DNA MER1_type -1 218 1 643 196 29 17 chr20 57559975 57560189 -14593693 + MER58 DNA MER1_type 1 2420 0 597 272 67 13 chr20 57560203 57560442 -14593440 - L2 LINE L2 -746 2568 2317 382 291 28 35 chr20 57560435 57560576 -14593306 + MIR SINE MIR 6 145 -117 * 244 285 57 16 chr20 57560646 57560769 -14593113 + MER5A DNA MER1_type 6 133 -56 * 273 257 50 20 chr20 57560672 57560773 -14593109 - MER5A DNA MER1_type -22 167 64 384 296 0 38 chr20 57560860 57560992 -14592890 - MIR3 SINE MIR -28 180 54 919 161 6 0 chr20 57561348 57561509 -14592373 - MER5B DNA MER1_type -6 172 11 560 227 45 11 chr20 57561520 57561696 -14592186 - MER113 DNA MER1_type? -62 459 278 325 239 103 17 chr20 57561725 57561842 -14592040 - MER113 DNA MER1_type? -330 191 65 359 316 78 16 chr20 57561846 57562039 -14591843 + MLT1K LTR MaLR 131 335 -253 216 194 69 42 chr20 57562051 57562123 -14591759 - MIR SINE MIR -94 114 41 2380 92 0 0 chr20 57562187 57562490 -14591392 - AluY SINE Alu 0 311 9 743 273 60 65 chr20 57562824 57563350 -14590532 - L2 LINE L2 0 3272 2767 253 243 0 27 chr20 57563524 57563598 -14590284 + GA-rich Low_complexity Low_complexity 2 73 0 872 240 25 0 chr20 57563633 57563829 -14590053 + MIR SINE MIR 9 209 -53 258 308 56 30 chr20 57564272 57564563 -14589319 - L2 LINE L2 -234 3038 2742 597 248 73 30 chr20 57564725 57564959 -14588923 - L2 LINE L2 0 3313 3070 330 26 0 0 chr20 57566134 57566173 -14587709 + (ATG)n Simple_repeat Simple_repeat 2 40 0 361 276 78 0 chr20 57566201 57566317 -14587565 - MIR SINE MIR -27 235 111 1594 207 119 14 chr20 57566600 57567020 -14586862 + MLT2B1 LTR ERVL 1 464 -56 933 199 6 0 chr20 57567024 57567195 -14586687 + FRAM SINE Alu 1 171 -5 262 146 0 0 chr20 57567197 57567238 -14586644 + MLT2B1 LTR ERVL 424 464 0 301 276 11 23 chr20 57567353 57567440 -14586442 + Charlie8 DNA MER1_type 1 86 -2331 853 292 36 10 chr20 57567504 57567777 -14586105 + L1MC/D LINE L1 5386 5680 -441 201 39 0 0 chr20 57567777 57567803 -14586079 + (CA)n Simple_repeat Simple_repeat 1 26 0 853 292 36 10 chr20 57567803 57567836 -14586046 + L1MC/D LINE L1 5680 5711 -410 2396 48 0 28 chr20 57567839 57568160 -14585722 - AluY SINE Alu 0 313 1 1848 164 31 0 chr20 57568160 57568446 -14585436 - AluJo SINE Alu -15 297 3 291 227 27 0 chr20 57568449 57568524 -14585358 + Charlie8 DNA MER1_type 70 146 -2271 893 220 6 0 chr20 57568840 57569017 -14584865 + MER45A DNA AcHobo 1 178 0 333 287 100 13 chr20 57569549 57569698 -14584184 - MIR3 SINE MIR -63 145 1 342 179 0 0 chr20 57569845 57569912 -14583970 - L2 LINE L2 -257 3056 2990 299 233 0 0 chr20 57569922 57569982 -14583900 - MIR SINE MIR -73 135 76 325 143 16 32 chr20 57570066 57570129 -14583753 - MER58A DNA MER1_type -4 220 159 353 231 13 0 chr20 57570132 57570210 -14583672 - MER58A DNA MER1_type 0 120 42 1098 250 246 9 chr20 57570623 57571087 -14582795 + MLT1K LTR MaLR 13 586 -2 2031 140 0 24 chr20 57571802 57572095 -14581787 + AluJo SINE Alu 2 287 -25 698 277 94 0 chr20 57572344 57572568 -14581314 - MIR SINE MIR 0 262 18 219 289 63 52 chr20 57572736 57573159 -14580723 - L2 LINE L2 -213 3059 2622 561 253 107 20 chr20 57573210 57573463 -14580419 + L2 LINE L2 2830 3104 -209 2450 84 0 3 chr20 57573491 57573789 -14580093 + AluSx SINE Alu 1 297 -15 543 221 21 14 chr20 57573804 57573949 -14579933 - L1MC5 LINE L1 -206 7755 7610 606 250 27 7 chr20 57574017 57574165 -14579717 + L2 LINE L2 3159 3309 -4 328 205 103 34 chr20 57574196 57574313 -14579569 - MIR SINE MIR -15 247 123 322 266 45 45 chr20 57574428 57574582 -14579300 + L2 LINE L2 2522 2675 -639 487 151 23 0 chr20 57574584 57574670 -14579212 + MER20 DNA MER1_type 128 215 -4 1342 227 149 32 chr20 57574837 57575523 -14578359 - L2 LINE L2 0 3313 2536 1528 218 61 20 chr20 57575785 57576225 -14577657 + L1MB2 LINE L1 4905 5362 -784 1739 108 24 7 chr20 57576225 57576512 -14577370 + MER44D DNA MER2_type 1 562 -47 4212 134 20 70 chr20 57576530 57576690 -14577192 + L1MB2 LINE L1 5360 5526 -645 2082 140 99 13 chr20 57576690 57577082 -14576800 + MSTB LTR MaLR 1 426 0 4212 134 20 70 chr20 57577082 57577776 -14576106 + L1MB2 LINE L1 5526 6171 0 298 214 43 0 chr20 57577802 57577872 -14576010 + MER5B DNA MER1_type 105 177 -1 213 304 152 18 chr20 57577872 57577984 -14575898 - MIR SINE MIR -90 172 46 605 287 48 32 chr20 57578455 57578706 -14575176 + MIR SINE MIR 5 259 -3 934 267 137 12 chr20 57578883 57579220 -14574662 - LTR16C LTR ERVL -4 487 109 657 328 30 21 chr20 57579347 57579582 -14574300 - MIR SINE MIR -3 259 23 192 217 122 70 chr20 57579894 57580009 -14573873 + MIR3 SINE MIR 81 201 -7 * 596 272 26 15 chr20 57579971 57580166 -14573716 - MIR SINE MIR -37 225 29 542 342 49 0 chr20 57580425 57580650 -14573232 - MIR SINE MIR -12 250 15 1890 155 9 28 chr20 57580702 57581019 -14572863 + AluJo SINE Alu 1 311 -1 274 343 78 0 chr20 57581045 57581211 -14572671 - MIR SINE MIR 0 262 84 350 203 0 196 chr20 57581215 57581368 -14572514 + MIR SINE MIR 18 140 -122 985 271 52 50 chr20 57581388 57581416 -14572466 + MLT1L LTR MaLR 30 56 -559 279 292 14 0 chr20 57581416 57581488 -14572394 + LTR67 LTR ERVL 101 173 -384 985 271 52 50 chr20 57581488 57581552 -14572330 + MLT1L LTR MaLR 56 118 -497 2164 121 0 20 chr20 57581552 57581858 -14572024 + AluSx SINE Alu 1 300 -12 985 271 52 50 chr20 57581858 57582177 -14571705 + MLT1L LTR MaLR 118 615 0 242 366 104 12 chr20 57582706 57582870 -14571012 - MIR SINE MIR -23 239 61 405 58 0 0 chr20 57583169 57583221 -14570661 + (TTCA)n Simple_repeat Simple_repeat 2 53 0 1457 241 53 16 chr20 57583234 57583867 -14570015 - L2 LINE L2 -39 3274 2616 336 209 76 48 chr20 57583889 57583994 -14569888 + MIR SINE MIR 48 155 -107 189 0 0 0 chr20 57585256 57585277 -14568605 + (TCC)n Simple_repeat Simple_repeat 3 23 0 22 35 0 0 chr20 57586558 57586587 -14567295 + GC_rich Low_complexity Low_complexity 1 29 0 290 150 0 17 chr20 57587125 57587185 -14566697 + (TTTC)n Simple_repeat Simple_repeat 3 61 0 681 108 8 16 chr20 57587504 57587633 -14566249 + (TCC)n Simple_repeat Simple_repeat 2 129 0 59 97 0 0 chr20 57588054 57588239 -14565643 + GC_rich Low_complexity Low_complexity 1 185 0 195 69 0 0 chr20 57588240 57588269 -14565613 + (TCC)n Simple_repeat Simple_repeat 1 29 0 180 0 0 0 chr20 57588270 57588290 -14565592 + (CGG)n Simple_repeat Simple_repeat 3 22 0 369 270 106 62 chr20 57588562 57588788 -14565094 - L2 LINE L2 -1 3312 3077 295 272 96 8 chr20 57588865 57588990 -14564892 - L2 LINE L2 -124 3189 3054 285 29 0 0 chr20 57588991 57589025 -14564857 + (TTCA)n Simple_repeat Simple_repeat 4 37 0 187 261 250 0 chr20 57589043 57589135 -14564747 - L2 LINE L2 -21 3251 3137 2074 144 7 3 chr20 57589285 57589590 -14564292 + AluJo SINE Alu 1 306 -6 341 265 58 105 chr20 57589750 57590075 -14563807 + L2 LINE L2 2533 2842 -472 * 448 292 70 35 chr20 57590059 57590343 -14563539 - L2 LINE L2 -100 3213 2920 244 296 65 37 chr20 57590730 57590838 -14563044 - MIR SINE MIR -123 139 29 311 245 66 19 chr20 57590913 57591019 -14562863 - L2 LINE L2 -6 3266 3156 892 207 0 0 chr20 57591183 57591347 -14562535 - FRAM SINE Alu -2 164 1 724 308 109 19 chr20 57591673 57592292 -14561590 - L1MC/D LINE L1 -601 5561 4910 396 0 0 0 chr20 57592292 57592336 -14561546 + (TG)n Simple_repeat Simple_repeat 1 44 0 724 308 109 19 chr20 57592336 57592646 -14561236 - L1MC/D LINE L1 -1252 4910 4629 1937 222 68 59 chr20 57592755 57593300 -14560582 + MLT2B3 LTR ERVL 5 554 0 180 0 0 0 chr20 57593417 57593437 -14560445 + (TTTG)n Simple_repeat Simple_repeat 3 22 0 847 179 11 47 chr20 57593445 57593635 -14560247 + MER20 DNA MER1_type 37 219 0 1204 298 101 10 chr20 57593680 57594351 -14559531 - L2 LINE L2 -3 3310 2570 674 152 8 32 chr20 57594394 57594477 -14559405 + MER20 DNA MER1_type 97 178 -41 2409 111 10 0 chr20 57594477 57594784 -14559098 + AluSx SINE Alu 1 310 -2 674 152 8 32 chr20 57594784 57594825 -14559057 + MER20 DNA MER1_type 178 218 -1 577 235 111 30 chr20 57595067 57595252 -14558630 + MIR SINE MIR 2 183 -58 964 291 50 52 chr20 57595347 57595767 -14558115 - MLT1L LTR MaLR -31 584 166 279 235 37 25 chr20 57595860 57595941 -14557941 + L2 LINE L2 3191 3272 0 4872 76 29 10 chr20 57595973 57596695 -14557187 + L1MA1 LINE L1 5567 6302 0 815 208 53 138 chr20 57597022 57597321 -14556561 + MER102a DNA MER1_type 1 265 -1152 2433 103 3 0 chr20 57597321 57597631 -14556251 - AluSx SINE Alu -1 311 1 815 208 53 138 chr20 57597631 57597692 -14556190 + MER102a DNA MER1_type 265 330 0 448 252 36 0 chr20 57597891 57598002 -14555880 + MLT1K LTR MaLR 474 588 0 1911 161 0 17 chr20 57598037 57598328 -14555554 - AluJb SINE Alu -18 294 9 1579 189 21 7 chr20 57598454 57598767 -14555115 + AluJb SINE Alu 1 317 0 305 318 18 0 chr20 57599426 57599536 -14554346 + MIR SINE MIR 136 247 -15 381 210 0 25 chr20 57599566 57599647 -14554235 - MIR SINE MIR 0 262 184 582 240 33 8 chr20 57599876 57599997 -14553885 - FLAM_A SINE Alu -9 124 1 192 279 0 0 chr20 57600128 57600189 -14553693 + (CCCA)n Simple_repeat Simple_repeat 4 64 0 269 258 11 0 chr20 57600243 57600336 -14553546 + (TCCA)n Simple_repeat Simple_repeat 1 94 0 315 263 34 17 chr20 57600350 57600468 -14553414 + (TCCA)n Simple_repeat Simple_repeat 3 122 0 260 333 72 13 chr20 57601043 57601196 -14552686 + L2 LINE L2 2623 2784 -530 594 209 86 144 chr20 57601447 57601844 -14552038 + MLT1H1 LTR MaLR 75 448 -107 2188 126 0 10 chr20 57601911 57602212 -14551670 + AluSx SINE Alu 1 298 -14 399 217 11 0 chr20 57602218 57602310 -14551572 + MLT1H1 LTR MaLR 463 555 0 237 236 102 108 chr20 57602312 57602469 -14551413 + L2 LINE L2 2931 3086 -186 614 211 114 34 chr20 57602533 57602708 -14551174 - MIR SINE MIR -64 198 10 550 279 83 5 chr20 57602934 57603138 -14550744 - MLT1L LTR MaLR -350 265 46 2810 132 19 0 chr20 57603273 57603697 -14550185 - MSTB1 LTR MaLR 0 432 1 573 282 134 43 chr20 57603944 57604434 -14549448 + L2 LINE L2 2684 3228 -85 321 294 147 7 chr20 57604426 57604569 -14549313 + L2 LINE L2 2602 2764 -550 * 1096 267 88 45 chr20 57604558 57604977 -14548905 + L2 LINE L2 2874 3310 -3 1760 178 99 21 chr20 57604978 57605028 -14548854 - L1MB7 LINE L1 -8 6176 6131 1836 142 3 39 chr20 57605028 57605338 -14548544 + AluJb SINE Alu 1 299 -13 1760 178 99 21 chr20 57605338 57605713 -14548169 - L1MB7 LINE L1 -53 6131 5718 804 211 189 19 chr20 57606097 57606362 -14547520 + MLT1J LTR MaLR 100 409 -102 2491 89 0 0 chr20 57606386 57606689 -14547193 + AluSx SINE Alu 1 303 -9 3644 116 0 13 chr20 57607050 57607586 -14546296 - MER1A DNA MER1_type 0 529 1 472 324 36 27 chr20 57607645 57607864 -14546018 + MIR SINE MIR 22 242 -20 204 313 30 0 chr20 57608093 57608160 -14545722 + MIR3 SINE MIR 87 155 -53 516 225 147 59 chr20 57608251 57608484 -14545398 - MER113 DNA MER1_type? -150 371 103 2367 101 7 0 chr20 57608484 57608781 -14545101 + AluSp SINE Alu 1 299 -14 516 225 147 59 chr20 57608781 57608854 -14545028 - MER113 DNA MER1_type? -418 103 38 2519 67 3 0 chr20 57608913 57609212 -14544670 + AluY SINE Alu 1 300 -11 189 0 0 0 chr20 57609241 57609262 -14544620 + (GAAA)n Simple_repeat Simple_repeat 2 22 0 408 262 133 0 chr20 57610181 57610321 -14543561 + MIR SINE MIR 33 188 -63 2149 120 0 0 chr20 57610436 57610728 -14543154 - AluSx SINE Alu 0 312 21 905 256 89 0 chr20 57610854 57611135 -14542747 - MER102b DNA MER1_type -3 338 33 333 268 193 36 chr20 57612292 57612624 -14541258 + MLT1I LTR MaLR 66 449 -1 462 224 65 0 chr20 57612704 57612811 -14541071 - MER91B DNA MER1_type 0 190 77 399 196 21 31 chr20 57612819 57612916 -14540966 - MER91B DNA MER1_type -60 130 35 307 258 89 23 chr20 57613104 57613262 -14540620 + MIR SINE MIR 6 187 -21 251 280 47 65 chr20 57613431 57613538 -14540344 - MIR SINE MIR 0 262 158 2409 99 0 0 chr20 57613948 57614251 -14539631 - AluSx SINE Alu -1 311 9 228 209 104 0 chr20 57614318 57614385 -14539497 - MIR SINE MIR -109 153 80 425 297 92 9 chr20 57614421 57614648 -14539234 - MIR SINE MIR -2 260 15 269 206 41 27 chr20 57614861 57614934 -14538948 - Charlie8 DNA MER1_type -2252 165 92 341 270 224 5 chr20 57615300 57615497 -14538385 + L1MC4a LINE L1 5674 5783 -379 26 30 0 0 chr20 57615706 57615739 -14538143 + AT_rich Low_complexity Low_complexity 1 33 0 926 161 0 6 chr20 57615887 57616067 -14537815 + (TGGA)n Simple_repeat Simple_repeat 1 179 0 402 260 0 0 chr20 57616083 57616210 -14537672 + (TGGA)n Simple_repeat Simple_repeat 4 130 0 852 213 0 0 chr20 57616228 57616587 -14537295 + (TGGA)n Simple_repeat Simple_repeat 1 359 0 189 333 64 0 chr20 57616590 57616668 -14537214 + MIR SINE MIR 179 261 -1 662 251 35 23 chr20 57616928 57617099 -14536783 - MIR SINE MIR -61 201 29 256 232 0 73 chr20 57617389 57617471 -14536411 - MIR SINE MIR -55 153 78 1308 263 131 10 chr20 57617626 57618116 -14535766 + MLT1K LTR MaLR 14 562 -26 679 238 124 18 chr20 57618812 57619085 -14534797 + MLT1H LTR MaLR 23 324 -225 353 198 26 52 chr20 57619065 57619181 -14534701 + MLT1H LTR MaLR 434 546 -3 * 553 273 58 32 chr20 57619636 57619914 -14533968 + L1MC1 LINE L1 5640 5924 -1884 1625 148 8 8 chr20 57619958 57620215 -14533667 - AluJo SINE Alu -19 293 37 1210 144 17 0 chr20 57620386 57620560 -14533322 - AluJo SINE Alu -50 262 86 191 311 33 0 chr20 57620787 57620848 -14533034 - MIR SINE MIR -85 177 115 207 295 33 0 chr20 57620848 57620909 -14532973 + L2 LINE L2 3246 3308 -5 338 229 156 15 chr20 57620976 57621161 -14532721 + MIR SINE MIR 30 243 -19 258 56 0 0 chr20 57621513 57621549 -14532333 + (TG)n Simple_repeat Simple_repeat 1 36 0 818 280 121 14 chr20 57621854 57622225 -14531657 + MLT1K LTR MaLR 22 432 -156 802 203 45 0 chr20 57622281 57622458 -14531424 + L1MC1 LINE L1 6148 6332 -1 1317 145 41 0 chr20 57622474 57622716 -14531166 + L1MD3 LINE L1 7730 7981 -14 544 199 73 52 chr20 57622750 57622886 -14530996 - MIR3 SINE MIR -55 153 15 295 317 0 20 chr20 57623354 57623455 -14530427 + MIR SINE MIR 164 262 0 1472 244 185 12 chr20 57623460 57624407 -14529475 + L2 LINE L2 1941 2723 -590 2275 104 0 3 chr20 57624407 57624704 -14529178 - AluSx SINE Alu -16 296 1 1472 244 185 12 chr20 57624704 57624723 -14529159 + L2 LINE L2 2723 2737 -576 1590 154 11 51 chr20 57624723 57625026 -14528856 - AluJo SINE Alu 0 314 23 1472 244 185 12 chr20 57625026 57625172 -14528710 + L2 LINE L2 2737 3304 -9 730 305 64 13 chr20 57625173 57625406 -14528476 - MIR SINE MIR -11 251 7 585 243 261 27 chr20 57625923 57626448 -14527434 + L2 LINE L2 2474 3112 -201 859 161 0 0 chr20 57626572 57626696 -14527186 - FLAM_A SINE Alu -8 125 2 1432 237 34 53 chr20 57626719 57626813 -14527069 + L1MC4 LINE L1 7530 7624 -418 2296 116 0 10 chr20 57626813 57627124 -14526758 + AluSc SINE Alu 1 308 -1 1432 237 34 53 chr20 57627124 57627552 -14526330 + L1MC4 LINE L1 7624 8042 0 2065 104 59 0 chr20 57627584 57627871 -14526011 + AluSx SINE Alu 1 304 -8 187 172 0 31 chr20 57627952 57628016 -14525866 + (CA)n Simple_repeat Simple_repeat 1 62 0 263 316 0 10 chr20 57628030 57628128 -14525754 + (CA)n Simple_repeat Simple_repeat 1 97 0 256 300 130 20 chr20 57628540 57628625 -14525257 + L2 LINE L2 3203 3302 -11 2169 132 14 20 chr20 57628625 57628676 -14525206 - THE1A LTR MaLR 0 355 305 180 0 0 0 chr20 57628676 57628696 -14525186 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 2169 132 14 20 chr20 57628696 57629001 -14524881 - THE1A LTR MaLR -50 305 1 256 300 130 20 chr20 57629001 57629015 -14524867 + L2 LINE L2 3302 3313 0 390 337 17 12 chr20 57629310 57629482 -14524400 - Charlie8 DNA MER1_type -2236 181 9 23 0 0 0 chr20 57629654 57629677 -14524205 + AT_rich Low_complexity Low_complexity 1 23 0 26 50 0 0 chr20 57629744 57629784 -14524098 + AT_rich Low_complexity Low_complexity 1 40 0 368 246 25 34 chr20 57630150 57630268 -14523614 + MER5B DNA MER1_type 4 120 -58 231 253 67 0 chr20 57630498 57630573 -14523309 + L2 LINE L2 3193 3272 0 4091 171 43 17 chr20 57630578 57631233 -14522649 + L1MB4 LINE L1 5172 5865 -315 1863 115 17 48 chr20 57631233 57631528 -14522354 + AluSx SINE Alu 2 287 -25 4091 171 43 17 chr20 57631528 57631847 -14522035 + L1MB4 LINE L1 5865 6174 -6 2036 116 20 14 chr20 57631924 57632218 -14521664 + AluSx SINE Alu 1 296 -16 917 164 7 0 chr20 57632224 57632370 -14521512 + Tigger7 DNA MER2_type 31 177 -2310 2230 88 0 36 chr20 57632400 57632708 -14521174 + AluSq SINE Alu 1 297 -16 187 310 0 0 chr20 57632734 57632792 -14521090 + MIR SINE MIR 181 238 -24 330 248 170 24 chr20 57632818 57633024 -14520858 + L1MC4a LINE L1 5861 6096 -1712 5275 144 42 37 chr20 57633044 57633556 -14520326 - L1MA9 LINE L1 0 6312 5804 2421 175 105 37 chr20 57633556 57633943 -14519939 + MER44D DNA MER2_type 1 488 -1999 2364 103 3 0 chr20 57633943 57634243 -14519639 + AluSp SINE Alu 1 301 -12 2421 175 105 37 chr20 57634243 57634370 -14519512 + MER44D DNA MER2_type 488 605 0 5275 144 42 37 chr20 57634370 57634835 -14519047 - L1MA9 LINE L1 -508 5804 5312 2416 75 0 3 chr20 57634835 57635127 -14518755 - AluSc SINE Alu -16 293 3 5275 144 42 37 chr20 57635127 57635213 -14518669 - L1MA9 LINE L1 -1000 5312 5228 25 0 0 0 chr20 57635246 57635271 -14518611 + AT_rich Low_complexity Low_complexity 1 25 0 1871 167 7 13 chr20 57635695 57636000 -14517882 - AluJo SINE Alu -9 303 1 1155 209 29 22 chr20 57636048 57636359 -14517523 + MER33 DNA MER1_type 12 324 0 582 244 39 27 chr20 57636472 57636673 -14517209 + MIR SINE MIR 38 241 -21 601 280 71 6 chr20 57636782 57636964 -14516918 + MIR SINE MIR 21 214 -48 337 329 65 42 chr20 57637070 57637238 -14516644 + MIR3 SINE MIR 10 181 -27 2147 121 0 14 chr20 57637745 57638042 -14515840 + AluSx SINE Alu 1 293 -19 191 88 29 0 chr20 57638043 57638077 -14515805 + (TA)n Simple_repeat Simple_repeat 2 36 0 767 236 135 25 chr20 57638086 57638450 -14515432 - L1MC4a LINE L1 -1904 5904 5501 421 299 117 7 chr20 57638677 57638831 -14515051 + MIR SINE MIR 24 194 -68 1260 146 0 0 chr20 57638913 57639091 -14514791 + AluJb SINE Alu 120 297 -15 349 320 149 37 chr20 57639220 57639542 -14514340 + L1ME LINE L1 5416 5773 -348 2201 127 0 7 chr20 57639579 57639886 -14513996 - AluSx SINE Alu -7 305 1 448 304 26 5 chr20 57639897 57640091 -14513791 - L1MC4a LINE L1 -1825 4321 4124 225 296 0 0 chr20 57640460 57640504 -14513378 + L2 LINE L2 3209 3252 -20 2355 99 0 6 chr20 57640512 57640853 -14513029 - AluSx SINE Alu 0 339 1 373 291 154 17 chr20 57640855 57641030 -14512852 - MIR SINE MIR -51 211 13 324 235 88 0 chr20 57641047 57641149 -14512733 - MIR SINE MIR -127 135 25 228 306 57 57 chr20 57641172 57641296 -14512586 + MER5A DNA MER1_type 39 162 -27 2371 112 0 0 chr20 57641543 57641855 -14512027 + AluSx SINE Alu 1 312 0 725 221 41 0 chr20 57641867 57642039 -14511843 + L1ME3 LINE L1 5650 5828 -334 2174 144 0 3 chr20 57642042 57642355 -14511527 + AluJb SINE Alu 1 312 0 836 139 0 56 chr20 57642357 57642501 -14511381 + FLAM_C SINE Alu 6 141 -2 852 241 5 10 chr20 57642501 57642708 -14511174 + L1ME3 LINE L1 5813 6018 -144 2079 119 11 0 chr20 57642733 57643052 -14510830 - AluSx SINE Alu 0 322 1 229 188 0 0 chr20 57643062 57643110 -14510772 + L1ME3 LINE L1 6114 6161 -1 185 0 40 0 chr20 57643128 57643153 -14510729 + (TAAAAA)n Simple_repeat Simple_repeat 2 27 0 248 210 25 37 chr20 57643261 57643342 -14510540 + HAL1b LINE L1 1267 1346 -2 221 238 0 0 chr20 57643395 57643437 -14510445 + MER5A DNA MER1_type 69 110 -79 231 204 0 0 chr20 57643487 57643531 -14510351 - L3 LINE CR1 -117 1460 1417 724 313 94 17 chr20 57643867 57644334 -14509548 - L2 LINE L2 0 3313 2811 392 268 107 24 chr20 57644349 57644554 -14509328 - L2 LINE L2 -214 3058 2837 201 156 0 0 chr20 57644726 57644758 -14509124 + (CA)n Simple_repeat Simple_repeat 1 32 0 445 268 117 48 chr20 57645113 57645514 -14508368 + Charlie8 DNA MER1_type 1 410 -2007 2224 115 3 10 chr20 57645520 57645834 -14508048 + AluSx SINE Alu 1 312 0 541 284 99 7 chr20 57645965 57646257 -14507625 - L2 LINE L2 -168 3145 2827 276 254 175 9 chr20 57646646 57646760 -14507122 + MIR3 SINE MIR 27 159 -49 499 247 151 12 chr20 57646854 57647020 -14506862 + MIR SINE MIR 14 202 -60 203 0 0 36 chr20 57647147 57647175 -14506707 + (TTAAA)n Simple_repeat Simple_repeat 1 27 0 881 268 155 23 chr20 57647270 57647962 -14505920 + L2 LINE L2 2487 3274 -39 181 296 45 0 chr20 57648077 57648121 -14505761 + L3b LINE CR1 1509 1554 -29 633 202 89 30 chr20 57648722 57648890 -14504992 - MIR SINE MIR -70 192 15 932 142 8 0 chr20 57649060 57649194 -14504688 + AluJo SINE Alu 1 135 -177 1846 158 3 53 chr20 57649194 57649517 -14504365 + AluJo SINE Alu 1 307 -5 311 196 0 0 chr20 57650109 57650165 -14503717 + MIR SINE MIR 195 250 -12 762 240 101 9 chr20 57650676 57650893 -14502989 + MIR SINE MIR 20 256 -6 2359 112 0 0 chr20 57651020 57651325 -14502557 + AluSx SINE Alu 1 305 -7 464 244 173 6 chr20 57651348 57651516 -14502366 + MIR SINE MIR 64 259 -3 * 570 220 54 54 chr20 57651483 57651651 -14502231 - MIR3 SINE MIR -19 189 22 300 27 0 0 chr20 57651676 57651713 -14502169 + (CAAA)n Simple_repeat Simple_repeat 1 37 0 576 259 16 95 chr20 57652160 57652403 -14501479 - MIR SINE MIR -25 237 14 1068 111 0 0 chr20 57652494 57652705 -14501177 + (TGGA)n Simple_repeat Simple_repeat 1 211 0 390 42 0 0 chr20 57652723 57652783 -14501099 + (GGAA)n Simple_repeat Simple_repeat 1 108 0 390 42 0 0 chr20 57652783 57652831 -14501051 + (GGAA)n Simple_repeat Simple_repeat 1 48 0 229 230 62 9 chr20 57653014 57653127 -14500755 + (TGGA)n Simple_repeat Simple_repeat 3 121 0 1970 157 33 12 chr20 57653239 57653576 -14500306 + MER2 DNA MER2_type 1 344 0 289 256 5 92 chr20 57653660 57653855 -14500027 + (TGGA)n Simple_repeat Simple_repeat 3 180 0 1549 89 41 20 chr20 57654381 57654627 -14499255 + MER4C LTR ERV1 215 465 0 1356 163 124 72 chr20 57654630 57654992 -14498890 + MER4C-int LTR ERV1 1 381 -6217 2160 125 0 10 chr20 57654992 57655295 -14498587 + AluSx SINE Alu 1 300 -12 2682 127 65 9 chr20 57655296 57655804 -14498078 + MER4B LTR ERV1 77 779 0 318 153 0 0 chr20 57655804 57655863 -14498019 + (TG)n Simple_repeat Simple_repeat 1 59 0 5755 190 94 76 chr20 57655867 57658425 -14495457 + MER4C-int LTR ERV1 1112 3715 -2883 13141 139 46 40 chr20 57658425 57659059 -14494823 + MER4C-int LTR ERV1 3932 4561 -2037 2221 116 7 7 chr20 57659059 57659360 -14494522 + AluSx SINE Alu 1 301 -11 13141 139 46 40 chr20 57659360 57661375 -14492507 + MER4C-int LTR ERV1 4561 6596 -2 1562 130 0 5 chr20 57661389 57661605 -14492277 + AluJb SINE Alu 11 225 -87 279 79 0 0 chr20 57661625 57661663 -14492219 + (GAAAA)n Simple_repeat Simple_repeat 3 40 0 2781 110 86 7 chr20 57661687 57662115 -14491767 + MER4C LTR ERV1 4 465 0 3531 166 26 24 chr20 57662115 57662177 -14491705 + L1MB7 LINE L1 5441 5501 -683 1907 188 0 0 chr20 57662177 57662485 -14491397 + AluJb SINE Alu 1 308 -4 3531 166 26 24 chr20 57662485 57662683 -14491199 + L1MB7 LINE L1 5501 5697 -487 2416 166 37 109 chr20 57662683 57662784 -14491098 + MER41C LTR ERV1 1 108 -446 2264 114 3 0 chr20 57662784 57663083 -14490799 - AluSq SINE Alu -13 300 1 2416 166 37 109 chr20 57663083 57663578 -14490304 + MER41C LTR ERV1 108 554 0 3531 166 26 24 chr20 57663578 57663997 -14489885 + L1MB7 LINE L1 5697 6123 -61 2384 75 3 3 chr20 57663997 57664292 -14489590 - AluSg1 SINE Alu -14 295 1 1352 194 12 23 chr20 57664315 57664573 -14489309 - AluJo SINE Alu -57 255 1 768 249 102 23 chr20 57664612 57665099 -14488783 - L2 LINE L2 -187 3126 2590 278 217 14 29 chr20 57665202 57665271 -14488611 + CT-rich Low_complexity Low_complexity 3 70 0 640 301 102 10 chr20 57665679 57665885 -14487997 + MIR SINE MIR 2 226 -36 780 258 49 20 chr20 57665993 57666237 -14487645 - MIR SINE MIR 0 262 12 230 191 265 0 chr20 57666943 57667011 -14486871 + L2 LINE L2 3186 3271 -42 260 314 0 0 chr20 57667049 57667119 -14486763 + MIR SINE MIR 154 223 -39 184 321 57 0 chr20 57667158 57667211 -14486671 + MIR SINE MIR 79 134 -128 415 250 229 49 chr20 57667411 57667699 -14486183 - Charlie8 DNA MER1_type -1982 435 96 189 305 67 49 chr20 57667993 57668157 -14485725 - MIR3 SINE MIR -28 180 14 322 298 33 39 chr20 57668260 57668328 -14485554 + HAL1b LINE L1 1146 1213 -135 2462 72 0 0 chr20 57668328 57668621 -14485261 - AluY SINE Alu -18 293 1 322 298 33 39 chr20 57668621 57668733 -14485149 + HAL1b LINE L1 1213 1325 -23 303 216 167 7 chr20 57668851 57668950 -14484932 + MIR3 SINE MIR 82 171 -37 1892 68 11 42 chr20 57669043 57669306 -14484576 - AluY SINE Alu -12 299 45 1711 189 17 0 chr20 57669457 57669753 -14484129 + AluJo SINE Alu 1 301 -11 414 154 26 26 chr20 57669783 57669861 -14484021 + MIR SINE MIR 87 164 -98 2303 85 0 0 chr20 57670018 57670324 -14483558 + AluSp SINE Alu 1 306 0 1206 200 18 7 chr20 57670827 57671107 -14482775 + L1MD3 LINE L1 7708 7990 -5 189 376 30 15 chr20 57671386 57671519 -14482363 + MIR SINE MIR 31 165 -97 21 0 0 0 chr20 57672015 57672036 -14481846 + GC_rich Low_complexity Low_complexity 1 21 0 222 171 0 0 chr20 57672415 57672456 -14481426 + G-rich Low_complexity Low_complexity 2 42 0 243 293 0 80 chr20 57672593 57672781 -14481101 + G-rich Low_complexity Low_complexity 4 176 0 329 241 35 69 chr20 57673227 57673372 -14480510 + MIR SINE MIR 91 230 -32 651 264 108 40 chr20 57673509 57673947 -14479935 + L2 LINE L2 2720 3182 -131 393 366 46 0 chr20 57674148 57674342 -14479540 + MIR SINE MIR 50 252 -10 509 253 28 28 chr20 57674396 57674543 -14479339 + MIR SINE MIR 114 259 -3 228 269 123 23 chr20 57674705 57674835 -14479047 + MLT1L LTR MaLR 64 206 -409 280 281 52 22 chr20 57674998 57675133 -14478749 + MLT1L LTR MaLR 476 614 -1 210 366 24 0 chr20 57675508 57675590 -14478292 + MIR SINE MIR 74 157 -105 412 289 39 8 chr20 57676119 57676247 -14477635 - MIR SINE MIR -50 212 81 259 281 21 10 chr20 57676299 57676395 -14477487 + L2 LINE L2 2882 2978 -294 227 223 114 99 chr20 57676535 57676615 -14477267 - LTR16B LTR ERVL -151 313 236 2152 119 13 7 chr20 57676615 57676925 -14476957 + AluSx SINE Alu 1 312 0 227 223 114 99 chr20 57676925 57677046 -14476836 - LTR16B LTR ERVL -228 236 109 472 243 37 7 chr20 57677335 57677471 -14476411 - Charlie8 DNA MER1_type -2152 265 126 254 179 0 15 chr20 57677829 57677896 -14475986 + (CA)n Simple_repeat Simple_repeat 1 66 0 733 147 9 0 chr20 57677948 57678057 -14475825 - MER81 DNA DNA -4 110 1 302 271 24 91 chr20 57678205 57678415 -14475467 + MLT1K LTR MaLR 29 224 -325 2052 105 51 7 chr20 57678801 57679096 -14474786 + AluSq SINE Alu 1 308 -5 2246 118 0 0 chr20 57679110 57679406 -14474476 + AluSx SINE Alu 1 296 -16 205 138 0 0 chr20 57679408 57679437 -14474445 + (CAG)n Simple_repeat Simple_repeat 1 29 0 813 109 13 15 chr20 57681038 57681275 -14472607 + AluSq SINE Alu 1 305 -8 2154 126 0 0 chr20 57681559 57681873 -14472009 + AluSx SINE Alu 1 314 0 2181 101 14 0 chr20 57682236 57682522 -14471360 + AluSx SINE Alu 1 290 -22 341 288 219 7 chr20 57682690 57682836 -14471046 + MIR SINE MIR 21 197 -65 949 217 85 33 chr20 57682975 57683247 -14470635 + MLT1K LTR MaLR 293 578 -10 595 287 49 6 chr20 57683429 57683450 -14470432 - MIR SINE MIR -82 180 161 890 249 0 0 chr20 57683450 57683627 -14470255 + MER45A DNA AcHobo 1 177 -1 595 287 49 6 chr20 57683627 57683769 -14470113 - MIR SINE MIR -101 161 10 263 159 29 58 chr20 57683878 57683947 -14469935 - LTR67 LTR ERVL -1 556 490 228 189 98 123 chr20 57684283 57684405 -14469477 - MIR SINE MIR -65 143 25 544 205 69 53 chr20 57684888 57685089 -14468793 + MIR SINE MIR 7 198 -10 586 291 193 0 chr20 57685705 57686000 -14467882 - MLT1K LTR MaLR -111 477 126 808 254 119 11 chr20 57686039 57686299 -14467583 + MLT1H LTR MaLR 41 328 -221 607 217 118 74 chr20 57686438 57686487 -14467395 + MIR SINE MIR 41 86 -176 1558 229 46 46 chr20 57686487 57686984 -14466898 - MLT1D LTR MaLR -4 501 5 607 217 118 74 chr20 57686984 57687137 -14466745 + MIR SINE MIR 86 252 -10 1926 137 0 38 chr20 57687160 57687474 -14466408 + AluJb SINE Alu 1 302 -10 312 301 9 53 chr20 57687480 57687593 -14466289 + L2 LINE L2 3149 3256 -16 316 227 0 0 chr20 57687604 57687670 -14466212 + MIR SINE MIR 69 134 -74 276 326 30 30 chr20 57688048 57688180 -14465702 - MIR3 SINE MIR -47 161 30 233 221 35 47 chr20 57688314 57688400 -14465482 - L2 LINE L2 -518 2796 2712 223 232 42 147 chr20 57688406 57688501 -14465381 + MER5A DNA MER1_type 7 91 -98 696 240 51 32 chr20 57688607 57688824 -14465058 + MIR SINE MIR 40 260 -2 195 298 113 0 chr20 57688817 57688958 -14464924 - L2 LINE L2 -608 2706 2550 * 511 269 102 37 chr20 57689107 57689196 -14464686 - MIR SINE MIR -17 245 163 1175 212 9 0 chr20 57689196 57689413 -14464469 - MER20 DNA MER1_type 0 219 1 511 269 102 37 chr20 57689413 57689539 -14464343 - MIR SINE MIR -99 163 16 2277 118 0 28 chr20 57690179 57690500 -14463382 - AluSx SINE Alu 0 312 1 2245 116 0 0 chr20 57690569 57690863 -14463019 + AluSx SINE Alu 1 294 -18 2033 120 39 0 chr20 57690863 57691147 -14462735 + AluSq SINE Alu 1 295 -18 216 67 0 0 chr20 57691609 57691639 -14462243 + (TG)n Simple_repeat Simple_repeat 1 30 0 2344 57 27 17 chr20 57691794 57692091 -14461791 + AluY SINE Alu 1 300 -11 357 330 0 0 chr20 57692151 57692248 -14461634 - MER5A DNA MER1_type -80 109 13 209 300 14 14 chr20 57692400 57692470 -14461412 - MIR3 SINE MIR -8 200 131 933 183 61 15 chr20 57692702 57692899 -14460983 - MER20 DNA MER1_type -10 209 4 628 326 31 5 chr20 57693012 57693236 -14460646 - L2 LINE L2 0 3313 3084 1415 170 4 9 chr20 57693330 57693560 -14460322 + AluJb SINE Alu 60 288 -24 1189 267 99 19 chr20 57693898 57694196 -14459686 + L2 LINE L2 2812 3162 -151 2377 149 47 5 chr20 57694196 57694605 -14459277 + MSTA LTR MaLR 1 426 -2 1189 267 99 19 chr20 57694605 57694771 -14459111 + L2 LINE L2 3162 3313 0 279 0 0 0 chr20 57694839 57694870 -14459012 + (TG)n Simple_repeat Simple_repeat 2 32 0 314 229 109 40 chr20 57694877 57695052 -14458830 + MER113 DNA MER1_type? 42 228 -293 463 198 20 0 chr20 57695201 57695302 -14458580 + MER113 DNA MER1_type? 274 376 -145 332 310 53 0 chr20 57695430 57695543 -14458339 + MIR SINE MIR 118 236 -26 * 787 289 30 13 chr20 57695541 57695776 -14458106 - MIR SINE MIR 0 262 24 707 218 0 6 chr20 57696062 57696241 -14457641 + (TCCA)n Simple_repeat Simple_repeat 1 178 0 730 198 11 0 chr20 57696278 57696455 -14457427 + (TCCA)n Simple_repeat Simple_repeat 1 179 0 227 267 22 0 chr20 57696488 57696578 -14457304 + (TCCA)n Simple_repeat Simple_repeat 1 92 0 186 306 56 0 chr20 57696585 57696657 -14457225 - L2 LINE L2 0 3313 3238 351 0 0 0 chr20 57696949 57696988 -14456894 + (TG)n Simple_repeat Simple_repeat 1 39 0 333 0 0 0 chr20 57696987 57697024 -14456858 + (GA)n Simple_repeat Simple_repeat 1 37 0 * 520 273 62 25 chr20 57697589 57697750 -14456132 - MIR SINE MIR -67 195 29 213 296 118 44 chr20 57697976 57698111 -14455771 + L2 LINE L2 3160 3304 -9 288 193 68 22 chr20 57698132 57698231 -14455651 + MIR SINE MIR 43 141 -67 581 211 303 0 chr20 57698392 57698567 -14455315 - Charlie8 DNA MER1_type -2184 233 6 194 233 137 14 chr20 57698574 57698647 -14455235 - MIR3 SINE MIR -46 162 81 602 321 84 15 chr20 57699122 57699465 -14454417 + L2 LINE L2 2809 3175 -138 1593 228 68 37 chr20 57699472 57699954 -14453928 - MLT1D LTR MaLR -8 497 1 213 211 0 0 chr20 57700016 57700054 -14453828 + L2 LINE L2 3221 3258 -14 2416 89 0 10 chr20 57700844 57701158 -14452724 - AluSq SINE Alu -2 311 1 35 41 0 0 chr20 57701158 57701207 -14452675 + AT_rich Low_complexity Low_complexity 1 49 0 2315 109 3 3 chr20 57701244 57701556 -14452326 - AluSx SINE Alu 0 312 1 1350 272 46 30 chr20 57701583 57701857 -14452025 + L1MC4a LINE L1 5383 5651 -2157 392 0 21 0 chr20 57701857 57701905 -14451977 + (CA)n Simple_repeat Simple_repeat 1 49 0 1350 272 46 30 chr20 57701905 57701941 -14451941 + L1MC4a LINE L1 5651 5685 -2123 1706 164 35 7 chr20 57701941 57702228 -14451654 - AluJo SINE Alu -17 295 1 1350 272 46 30 chr20 57702228 57702457 -14451425 + L1MC4a LINE L1 5685 5932 -1876 21 36 0 0 chr20 57702640 57702668 -14451214 + AT_rich Low_complexity Low_complexity 1 28 0 2543 85 0 0 chr20 57702803 57703110 -14450772 - AluSg1 SINE Alu -2 307 1 814 148 0 0 chr20 57703174 57703335 -14450547 + FLAM_C SINE Alu 1 161 0 187 295 152 9 chr20 57703378 57703483 -14450399 - L2 LINE L2 -685 2629 2510 208 259 0 0 chr20 57703786 57703840 -14450042 + (TAA)n Simple_repeat Simple_repeat 3 56 0 648 165 93 50 chr20 57703844 57704026 -14449856 - MIR SINE MIR -8 254 65 237 241 165 8 chr20 57704269 57704402 -14449480 - MER96 DNA MER1_type? 0 175 22 509 284 102 15 chr20 57704603 57704867 -14449015 + LTR16C LTR ERVL 204 490 -1 1998 108 4 14 chr20 57704966 57705244 -14448638 + AluSq SINE Alu 37 311 -2 572 271 92 45 chr20 57705295 57705609 -14448273 - MLT1K LTR MaLR 0 588 260 346 142 17 175 chr20 57705682 57705734 -14448148 - MER5A DNA MER1_type -80 109 85 1923 166 3 0 chr20 57705734 57706023 -14447859 - AluJo SINE Alu -22 290 1 346 142 17 175 chr20 57706023 57706090 -14447792 - MER5A DNA MER1_type -104 85 9 2396 100 0 0 chr20 57706140 57706439 -14447443 + AluSq SINE Alu 1 299 -14 250 320 167 7 chr20 57706539 57706689 -14447193 - MIR SINE MIR -46 216 43 260 321 43 54 chr20 57706717 57706901 -14446981 - L1MC/D LINE L1 -2051 5757 5576 621 267 28 37 chr20 57707113 57707165 -14446717 - MLT1K LTR MaLR -254 334 283 2024 179 13 15 chr20 57707165 57707556 -14446326 + MLT1B LTR MaLR 1 390 0 621 267 28 37 chr20 57707556 57707720 -14446162 - MLT1K LTR MaLR -305 283 120 1915 179 0 7 chr20 57707779 57708081 -14445801 + AluJb SINE Alu 1 300 -12 2411 82 0 20 chr20 57708153 57708459 -14445423 - AluSx SINE Alu -12 300 1 319 234 178 9 chr20 57708687 57708794 -14445088 + L2 LINE L2 3147 3271 -1 373 269 39 62 chr20 57708934 57709142 -14444740 - L1ME3A LINE L1 0 6170 5968 407 297 38 16 chr20 57709240 57709425 -14444457 - L1MC5 LINE L1 -446 7515 7327 865 111 0 0 chr20 57709828 57709945 -14443937 + AluSg/x SINE Alu 180 296 -14 527 261 38 90 chr20 57710235 57710356 -14443526 - MER113 DNA MER1_type? -83 438 312 2448 77 0 0 chr20 57710356 57710654 -14443228 - AluSc SINE Alu -2 307 10 527 261 38 90 chr20 57710654 57710770 -14443112 - MER113 DNA MER1_type? -209 312 191 2161 123 3 7 chr20 57710770 57711063 -14442819 - AluSx SINE Alu -20 292 1 2282 127 0 0 chr20 57711063 57711371 -14442511 - AluSg SINE Alu -1 309 2 527 261 38 90 chr20 57711371 57711530 -14442352 - MER113 DNA MER1_type? -328 193 61 531 352 17 13 chr20 57711570 57711800 -14442082 + MIR SINE MIR 15 245 -17 520 273 82 41 chr20 57711782 57711976 -14441906 - MIR SINE MIR -59 203 2 * 633 128 0 0 chr20 57711980 57712082 -14441800 + (TCCA)n Simple_repeat Simple_repeat 4 105 0 344 240 80 10 chr20 57712158 57712258 -14441624 + MIR SINE MIR 49 155 -107 293 299 153 23 chr20 57712373 57712634 -14441248 + L2 LINE L2 2819 3113 -159 449 292 0 21 chr20 57712863 57713007 -14440875 + MIR SINE MIR 105 245 -17 393 244 0 0 chr20 57713054 57713140 -14440742 - MER96 DNA MER1_type? 0 175 90 208 231 77 0 chr20 57713226 57713278 -14440604 + MIR SINE MIR 110 165 -97 522 309 52 48 chr20 57713533 57713782 -14440100 - MIR SINE MIR -11 251 2 569 106 21 0 chr20 57713786 57713880 -14440002 + (TCCA)n Simple_repeat Simple_repeat 2 97 0 681 236 34 61 chr20 57713880 57714085 -14439797 - L2 LINE L2 0 3313 3104 1903 138 0 30 chr20 57714085 57714381 -14439501 + AluJo SINE Alu 1 287 -25 2455 80 23 0 chr20 57714381 57714682 -14439200 + AluSx SINE Alu 1 308 -4 681 236 34 61 chr20 57714682 57714738 -14439144 - L2 LINE L2 -207 3106 3058 * 840 287 103 2 chr20 57714736 57715172 -14438710 - L2 LINE L2 -510 2804 2325 496 224 7 53 chr20 57715385 57715537 -14438345 - MER20 DNA MER1_type -59 160 16 189 77 0 0 chr20 57715572 57715598 -14438284 - L2 LINE L2 -18 3254 3229 * 254 276 81 32 chr20 57715582 57715705 -14438177 + L2 LINE L2 2939 3067 -246 1872 132 3 37 chr20 57715752 57716048 -14437834 - AluJb SINE Alu -1 311 26 340 311 17 8 chr20 57716145 57716264 -14437618 - L2 LINE L2 -269 3044 2925 322 267 0 93 chr20 57716625 57716729 -14437153 + MIR SINE MIR 46 158 -104 1977 140 4 0 chr20 57716729 57717008 -14436874 + AluJb SINE Alu 1 280 -32 198 0 0 0 chr20 57717008 57717030 -14436852 + (TAAA)n Simple_repeat Simple_repeat 1 22 0 322 267 0 93 chr20 57717030 57717074 -14436808 + MIR SINE MIR 156 181 -81 252 246 110 70 chr20 57717262 57717397 -14436485 + MIR SINE MIR 24 162 -62 714 217 69 21 chr20 57717652 57717841 -14436041 + MIR SINE MIR 1 198 -64 1167 127 0 0 chr20 57717890 57718048 -14435834 + AluJb SINE Alu 137 294 -18 2438 56 0 7 chr20 57718232 57718551 -14435331 + AluY SINE Alu 1 317 0 298 238 12 12 chr20 57718743 57718823 -14435059 + L2 LINE L2 3193 3272 0 287 333 67 9 chr20 57718916 57719126 -14434756 - L2 LINE L2 -356 2958 2737 198 0 0 0 chr20 57719132 57719154 -14434728 + (TG)n Simple_repeat Simple_repeat 1 22 0 2045 131 0 0 chr20 57719180 57719504 -14434378 - AluJb SINE Alu 0 326 3 553 223 70 25 chr20 57719511 57719668 -14434214 - MIR SINE MIR -72 190 27 668 262 72 18 chr20 57720346 57720567 -14433315 - MIR SINE MIR -6 256 24 302 275 18 28 chr20 57720865 57720974 -14432908 - MIR SINE MIR -63 145 38 2298 125 0 0 chr20 57721037 57721349 -14432533 + AluSx SINE Alu 1 312 0 279 217 33 22 chr20 57721450 57721542 -14432340 + (CACCC)n Simple_repeat Simple_repeat 3 95 0 235 140 77 0 chr20 57721548 57721691 -14432191 + (CACCAT)n Simple_repeat Simple_repeat 1 154 0 384 213 50 7 chr20 57721695 57721836 -14432046 + (CACCC)n Simple_repeat Simple_repeat 3 149 0 239 287 76 68 chr20 57721855 57722106 -14431776 + L2 LINE L2 1814 2066 -1248 1137 280 108 47 chr20 57722106 57723121 -14430761 + L2 LINE L2 2191 3293 -20 552 56 9 47 chr20 57723121 57723228 -14430654 + (TGGA)n Simple_repeat Simple_repeat 1 103 0 1137 280 108 47 chr20 57723228 57723251 -14430631 + L2 LINE L2 3293 3313 0 927 99 5 41 chr20 57723281 57723648 -14430234 + (TGGA)n Simple_repeat Simple_repeat 1 353 0 1086 80 5 35 chr20 57723660 57724098 -14429784 + (TGGA)n Simple_repeat Simple_repeat 1 424 0 800 285 83 6 chr20 57725053 57725365 -14428517 - LTR16A LTR ERVL -7 443 108 863 299 89 46 chr20 57725416 57726140 -14427742 + L2 LINE L2 2550 3313 0 875 309 88 34 chr20 57726156 57726681 -14427201 - L1M4 LINE L1 -2839 3307 2755 203 267 100 11 chr20 57726683 57726773 -14427109 + MIR SINE MIR 65 162 -100 2310 120 0 0 chr20 57726781 57727081 -14426801 + AluSx SINE Alu 2 301 -11 2004 114 85 0 chr20 57727257 57727529 -14426353 + AluSx SINE Alu 2 296 -16 2525 86 0 16 chr20 57727811 57728126 -14425756 + AluSg SINE Alu 1 310 0 1930 158 0 0 chr20 57728166 57728445 -14425437 + AluJb SINE Alu 5 283 -29 193 29 59 0 chr20 57728448 57728482 -14425400 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 418 353 52 6 chr20 57728556 57728729 -14425153 - MIR SINE MIR -12 250 70 245 218 103 147 chr20 57728792 57728948 -14424934 - L2 LINE L2 -2 3311 3163 2231 126 3 0 chr20 57729061 57729370 -14424512 - AluSx SINE Alu 0 312 3 1287 149 157 30 chr20 57729475 57729737 -14424145 - AluJo SINE Alu -7 295 1 650 155 14 78 chr20 57730065 57730207 -14423675 + MER58A DNA MER1_type 30 162 0 2063 203 42 56 chr20 57730236 57730280 -14423602 - MER21A LTR ERV1 -26 905 862 2204 114 3 0 chr20 57730280 57730570 -14423312 - AluSx SINE Alu -21 291 1 2063 203 42 56 chr20 57730570 57731043 -14422839 - MER21A LTR ERV1 -69 862 395 2162 95 0 4 chr20 57731044 57731318 -14422564 - AluSx SINE Alu -8 304 32 267 314 83 8 chr20 57731319 57731440 -14422442 - MIR SINE MIR -60 148 19 2200 77 46 11 chr20 57731902 57732187 -14421695 - AluSq SINE Alu -18 295 1 764 113 26 0 chr20 57732322 57732437 -14421445 - FLAM_C SINE Alu -15 118 1 1584 151 0 20 chr20 57732519 57732770 -14421112 - AluJb SINE Alu -23 289 44 286 281 62 0 chr20 57732794 57732890 -14420992 + L1ME3A LINE L1 6069 6170 0 356 246 22 80 chr20 57733035 57733173 -14420709 + L1ME LINE L1 4884 5013 -1133 233 298 36 0 chr20 57733180 57733264 -14420618 + L1ME LINE L1 5525 5611 -510 1891 158 3 3 chr20 57733268 57733559 -14420323 + AluJb SINE Alu 5 295 -17 306 182 0 0 chr20 57733563 57733629 -14420253 + (TG)n Simple_repeat Simple_repeat 1 66 0 456 298 42 21 chr20 57733629 57733820 -14420062 + L1ME LINE L1 5612 5806 -315 930 228 76 14 chr20 57733851 57734127 -14419755 - L2 LINE L2 -2 3311 3019 1957 146 13 30 chr20 57734295 57734597 -14419285 + AluJb SINE Alu 1 297 -15 210 265 133 0 chr20 57734751 57734834 -14419048 + MIR SINE MIR 8 101 -161 317 191 0 0 chr20 57734875 57734938 -14418944 + MER20 DNA MER1_type 101 163 -56 261 274 0 0 chr20 57735020 57735082 -14418800 + MIR SINE MIR 201 262 0 196 380 0 13 chr20 57736496 57736575 -14417307 + L2 LINE L2 3144 3221 -51 204 67 0 0 chr20 57738254 57738284 -14415598 + (CAAA)n Simple_repeat Simple_repeat 3 32 0 189 121 0 0 chr20 57738367 57738400 -14415482 + (CA)n Simple_repeat Simple_repeat 1 33 0 2011 130 7 23 chr20 57738648 57738956 -14414926 + AluJb SINE Alu 1 303 -9 27 0 0 0 chr20 57739294 57739321 -14414561 + GC_rich Low_complexity Low_complexity 1 27 0 296 281 223 0 chr20 57740724 57740845 -14413037 - MIR SINE MIR -48 214 67 261 0 0 0 chr20 57740978 57741007 -14412875 + (CA)n Simple_repeat Simple_repeat 2 30 0 1939 123 38 17 chr20 57741722 57742014 -14411868 + AluSx SINE Alu 1 298 -14 1827 163 10 3 chr20 57742094 57742388 -14411494 - AluJb SINE Alu -16 296 1 331 273 50 0 chr20 57742891 57743012 -14410870 + L1ME4a LINE L1 5718 5844 -277 228 252 230 15 chr20 57743017 57743152 -14410730 - MIR SINE MIR -1 261 98 230 0 33 0 chr20 57743422 57743452 -14410430 + (TG)n Simple_repeat Simple_repeat 2 32 0 871 189 63 0 chr20 57743453 57743612 -14410270 - AluJo SINE Alu -24 288 120 348 192 0 27 chr20 57743621 57743694 -14410188 + Charlie5 DNA MER1_type 2554 2624 0 1948 170 27 27 chr20 57744027 57744468 -14409414 - L1MB8 LINE L1 -1 6177 5737 2200 103 28 7 chr20 57744915 57745206 -14408676 + AluSg SINE Alu 5 301 -9 265 301 13 34 chr20 57745873 57745984 -14407898 - Charlie8 DNA MER1_type 0 2417 221 253 333 48 9 chr20 57746114 57746219 -14407663 - MIR SINE MIR -84 124 16 258 260 41 14 chr20 57747068 57747141 -14406741 + L2 LINE L2 3238 3312 -1 2246 112 13 0 chr20 57747993 57748297 -14405585 - AluSx SINE Alu -4 308 1 774 154 0 0 chr20 57748338 57748455 -14405427 - AluJo SINE Alu -184 118 2 630 150 35 9 chr20 57749170 57749283 -14404599 + FLAM_A SINE Alu 5 120 -13 1416 145 45 45 chr20 57749354 57749537 -14404345 + Tigger3(Golem) DNA MER2_type 20 205 -2824 2394 92 0 0 chr20 57749537 57749832 -14404050 + AluSq SINE Alu 1 295 -18 1416 145 45 45 chr20 57749832 57749937 -14403945 + Tigger3(Golem) DNA MER2_type 204 308 -2721 534 118 0 0 chr20 57749940 57750008 -14403874 - AluJ/FRAM SINE Alu -26 286 219 1021 174 0 66 chr20 57750017 57750213 -14403669 + AluJo SINE Alu 44 226 -86 2869 154 47 24 chr20 57750218 57750751 -14403131 + Tigger3(Golem) DNA MER2_type 2485 3029 0 377 315 111 34 chr20 57751434 57751732 -14402150 - HAL1 LINE L1 -87 2420 2100 282 289 99 8 chr20 57751743 57751864 -14402018 - HAL1 LINE L1 -469 2038 1907 644 244 86 28 chr20 57751915 57752206 -14401676 - HAL1 LINE L1 -1212 1295 988 1212 244 214 19 chr20 57752207 57752727 -14401155 - HAL1 LINE L1 -1787 720 100 1924 161 0 3 chr20 57753367 57753671 -14400211 + AluJb SINE Alu 1 303 -9 30 27 0 0 chr20 57754402 57754439 -14399443 + AT_rich Low_complexity Low_complexity 1 37 0 1658 135 0 64 chr20 57754445 57754727 -14399155 + AluSq SINE Alu 39 302 -11 1867 128 46 7 chr20 57755085 57755367 -14398515 + AluSx SINE Alu 1 293 -19 2348 104 0 0 chr20 57755377 57755674 -14398208 + AluSx SINE Alu 1 297 -15 732 228 6 72 chr20 57755801 57755867 -14398015 + MER5B DNA MER1_type 1 70 -108 2132 125 7 0 chr20 57755867 57756170 -14397712 + AluSx SINE Alu 1 305 -7 732 228 6 72 chr20 57756170 57756283 -14397599 + MER5B DNA MER1_type 70 168 -10 1472 139 8 41 chr20 57757142 57757386 -14396496 - MER46A DNA MER2_type 0 236 1 312 239 11 45 chr20 57757489 57757577 -14396305 - L2 LINE L2 0 3272 3188 378 299 147 22 chr20 57757594 57757778 -14396104 + MIR SINE MIR 14 220 -42 1534 176 3 77 chr20 57758895 57759219 -14394663 + AluJb SINE Alu 1 300 -12 2225 101 0 3 chr20 57759222 57759510 -14394372 + AluSq SINE Alu 4 290 -23 2157 126 3 0 chr20 57759719 57760020 -14393862 + AluSq SINE Alu 3 304 -9 2244 166 73 17 chr20 57760049 57760458 -14393424 + MSTB1 LTR MaLR 1 432 0 554 243 46 7 chr20 57762766 57762918 -14390964 - MER5A DNA MER1_type -31 158 1 311 204 316 36 chr20 57762947 57763143 -14390739 - MIR SINE MIR -4 258 8 1195 92 164 15 chr20 57763871 57764066 -14389816 - AluSc SINE Alu -3 306 83 360 196 120 0 chr20 57764378 57764470 -14389412 - MER103 DNA DNA -45 121 19 345 313 80 18 chr20 57764608 57764771 -14389111 - L3 LINE CR1 -613 964 792 1357 139 128 48 chr20 57764774 57765047 -14388835 + AluJb SINE Alu 1 295 -17 284 317 78 21 chr20 57765129 57765271 -14388611 - MIR SINE MIR -65 197 48 2230 108 7 3 chr20 57765299 57765605 -14388277 - AluSx SINE Alu -5 307 1 203 241 11 115 chr20 57765721 57765808 -14388074 - L2 LINE L2 -9 3263 3186 488 284 0 16 chr20 57766421 57766548 -14387334 + L2 LINE L2 3175 3299 -14 23 0 0 0 chr20 57766548 57766571 -14387311 + AT_rich Low_complexity Low_complexity 1 23 0 481 200 11 74 chr20 57766836 57767011 -14386871 + L1MC4a LINE L1 5664 5827 -1981 1147 249 105 8 chr20 57767013 57767410 -14386472 + L1ME3A LINE L1 5712 6161 -9 810 203 0 0 chr20 57767628 57767761 -14386121 + FLAM_A SINE Alu 1 133 0 321 26 0 0 chr20 57767761 57767799 -14386083 + (TA)n Simple_repeat Simple_repeat 2 39 0 303 262 47 68 chr20 57768008 57768199 -14385683 + L1MC4 LINE L1 7213 7399 -643 918 184 6 11 chr20 57768313 57768487 -14385395 - AluJo SINE Alu -36 276 104 450 0 0 0 chr20 57768492 57768542 -14385340 + (CA)n Simple_repeat Simple_repeat 2 51 0 1015 237 142 76 chr20 57768570 57769055 -14384827 + L1MC4 LINE L1 7526 8042 0 1582 169 32 14 chr20 57769206 57769490 -14384392 + AluJo SINE Alu 1 289 -23 399 41 0 0 chr20 57769505 57769554 -14384328 + (TAA)n Simple_repeat Simple_repeat 1 49 0 239 293 71 0 chr20 57769655 57769754 -14384128 - L2 LINE L2 0 3313 3208 492 244 198 5 chr20 57770998 57771215 -14382667 - MIR SINE MIR -2 260 2 2355 56 6 37 chr20 57771302 57771623 -14382259 - AluY SINE Alu 0 311 1 848 203 13 0 chr20 57771631 57771784 -14382098 - AluJb SINE Alu -25 287 133 1843 163 3 0 chr20 57772942 57773231 -14380651 - AluJo SINE Alu -22 290 1 249 330 217 0 chr20 57773364 57773479 -14380403 + L2 LINE L2 3129 3268 -4 2338 99 3 0 chr20 57773485 57773787 -14380095 + AluSp SINE Alu 1 303 -10 250 271 10 31 chr20 57773931 57774027 -14379855 + L1MB4 LINE L1 5536 5629 -541 497 168 95 0 chr20 57774098 57774193 -14379689 + MER41B LTR ERV1 444 547 -88 782 200 8 0 chr20 57774502 57774627 -14379255 - FLAM_A SINE Alu -7 126 1 646 251 114 20 chr20 57774826 57775125 -14378757 + L1ME4a LINE L1 5501 5827 -294 2084 134 14 0 chr20 57775167 57775451 -14378431 + AluSx SINE Alu 1 288 -24 341 207 0 0 chr20 57776787 57776845 -14377037 + AluS SINE Alu 2 59 -244 337 231 108 31 chr20 57776960 57777090 -14376792 + L1MC4 LINE L1 7282 7421 -621 250 197 124 109 chr20 57777091 57777170 -14376712 + L1MC5 LINE L1 7289 7372 -589 2322 90 0 0 chr20 57777170 57777460 -14376422 + AluSg SINE Alu 1 290 -20 250 197 124 109 chr20 57777460 57777517 -14376365 + L1MC5 LINE L1 7372 7427 -534 273 88 0 0 chr20 57777702 57777736 -14376146 + U2 snRNA snRNA 1 34 -154 444 252 107 42 chr20 57777756 57778018 -14375864 + L1MC4 LINE L1 7764 8042 0 1976 75 89 65 chr20 57778026 57778318 -14375564 + AluY SINE Alu 1 299 -12 323 136 0 0 chr20 57778530 57778574 -14375308 + FLAM_C SINE Alu 1 44 -90 586 109 0 82 chr20 57778674 57778784 -14375098 + FLAM_C SINE Alu 42 142 -1 234 0 0 0 chr20 57781805 57781831 -14372051 + (ATTG)n Simple_repeat Simple_repeat 2 27 0 2097 115 0 7 chr20 57781831 57782118 -14371764 - AluSx SINE Alu -27 285 1 2039 87 0 35 chr20 57783485 57783774 -14370108 + AluSg SINE Alu 29 307 -3 24 0 0 0 chr20 57784423 57784447 -14369435 + AT_rich Low_complexity Low_complexity 1 24 0 1557 154 32 92 chr20 57784494 57784864 -14369018 + L1MB4 LINE L1 5803 6150 -30 531 71 0 0 chr20 57784871 57784941 -14368941 - MER41A LTR ERV1 -85 469 400 236 105 0 0 chr20 57784941 57784979 -14368903 + L1MB4 LINE L1 6135 6172 -8 1593 179 18 4 chr20 57785036 57785310 -14368572 + AluJo SINE Alu 29 306 -6 1207 237 56 6 chr20 57785462 57785783 -14368099 + L2 LINE L2 2096 2432 -882 774 251 89 68 chr20 57785783 57785884 -14367998 + L2 LINE L2 2650 2747 -566 1833 180 0 0 chr20 57785884 57786189 -14367693 + AluJo SINE Alu 1 305 -7 774 251 89 68 chr20 57786189 57786255 -14367627 + L2 LINE L2 2747 2810 -503 449 286 133 0 chr20 57786255 57786451 -14367431 + MER58A DNA MER1_type 1 222 -2 774 251 89 68 chr20 57786451 57786768 -14367114 + L2 LINE L2 2810 3140 -173 242 167 0 0 chr20 57786786 57786828 -14367054 + L2 LINE L2 3265 3306 -7 1699 152 23 46 chr20 57786882 57787185 -14366697 + AluJo SINE Alu 1 296 -16 507 279 102 28 chr20 57787403 57787456 -14366426 + MIR SINE MIR 6 54 -208 2155 96 6 56 chr20 57787456 57787780 -14366102 - AluSx SINE Alu -4 308 1 507 279 102 28 chr20 57787780 57787929 -14365953 + MIR SINE MIR 54 227 -35 2238 120 0 0 chr20 57787929 57788221 -14365661 + AluSx SINE Alu 1 292 -20 507 279 102 28 chr20 57788221 57788232 -14365650 + MIR SINE MIR 227 236 -26 221 256 146 0 chr20 57788227 57788309 -14365573 + MIR SINE MIR 148 241 -21 * 2147 102 10 3 chr20 57788351 57788644 -14365238 + AluY SINE Alu 1 295 -16 207 256 97 8 chr20 57788856 57788937 -14364945 + MIR SINE MIR 40 124 -84 379 186 0 0 chr20 57789016 57789086 -14364796 - L1MC3 LINE L1 -9 7776 7707 21 0 0 0 chr20 57789713 57789734 -14364148 + AT_rich Low_complexity Low_complexity 1 21 0 1379 200 3 54 chr20 57790675 57790990 -14362892 + AluJo SINE Alu 1 299 -13 1246 165 63 0 chr20 57791102 57791308 -14362574 + MER20 DNA MER1_type 1 219 0 2394 100 0 0 chr20 57791435 57791744 -14362138 + AluSg SINE Alu 2 310 0 29 0 0 0 chr20 57791944 57791973 -14361909 + AT_rich Low_complexity Low_complexity 1 29 0 280 234 13 13 chr20 57792635 57792712 -14361170 + L1M4b LINE L1 1331 1407 -5452 2296 100 7 0 chr20 57792727 57793026 -14360856 + AluSp SINE Alu 1 301 -12 325 229 60 59 chr20 57793544 57793750 -14360132 - L1MC5 LINE L1 -1 8041 7829 529 224 32 0 chr20 57793803 57793928 -14359954 - L1ME2 LINE L1 -48 6116 5988 421 130 0 0 chr20 57793953 57794022 -14359860 - FLAM SINE Alu -11 132 64 1992 151 6 6 chr20 57794064 57794376 -14359506 - AluSx SINE Alu 0 312 1 1227 113 0 0 chr20 57794471 57794631 -14359251 + AluSp SINE Alu 135 294 -19 23 0 0 0 chr20 57794643 57794666 -14359216 + AT_rich Low_complexity Low_complexity 1 23 0 1773 128 44 27 chr20 57795305 57795602 -14358280 + AluJo SINE Alu 1 302 -10 663 222 107 23 chr20 57795716 57795932 -14357950 + L1ME4a LINE L1 5887 6120 -1 1549 108 0 14 chr20 57796336 57796559 -14357323 + AluJo SINE Alu 85 304 -8 202 361 14 0 chr20 57796712 57796784 -14357098 + MIR3 SINE MIR 108 180 -28 2134 146 58 0 chr20 57796945 57797274 -14356608 + MER7A DNA MER2_type 1 346 0 397 253 18 66 chr20 57797400 57797556 -14356326 - MIR SINE MIR -75 133 15 1362 172 73 15 chr20 57798442 57798703 -14355179 + AluJo SINE Alu 3 278 -34 187 81 0 122 chr20 57798707 57798781 -14355101 + (GGAAA)n Simple_repeat Simple_repeat 2 66 0 183 100 0 0 chr20 57798900 57798930 -14354952 + (CA)n Simple_repeat Simple_repeat 2 31 0 326 100 0 0 chr20 57799276 57799326 -14354556 - AluSp/q SINE Alu -7 296 247 367 179 12 36 chr20 57799335 57799419 -14354463 + Charlie3 DNA MER1_type 2625 2706 -4 2193 90 42 0 chr20 57799482 57799771 -14354111 - AluSx SINE Alu -11 301 1 2002 132 0 3 chr20 57802110 57802420 -14351462 + AluSx SINE Alu 1 309 -3 198 0 0 0 chr20 57803438 57803460 -14350422 + (A)n Simple_repeat Simple_repeat 1 22 0 2119 158 61 131 chr20 57803557 57803719 -14350163 - MER44D DNA MER2_type -1882 605 433 1634 131 243 114 chr20 57803719 57804307 -14349575 + MER4A LTR ERV1 1 664 0 2119 158 61 131 chr20 57804307 57804405 -14349477 - MER44D DNA MER2_type -2054 433 330 1469 132 106 15 chr20 57804405 57804670 -14349212 - AluJb SINE Alu -23 289 1 2119 158 61 131 chr20 57804670 57804997 -14348885 - MER44D DNA MER2_type -2157 330 3 231 227 0 0 chr20 57805167 57805211 -14348671 + L2 LINE L2 3182 3225 -47 1789 153 34 0 chr20 57805863 57806158 -14347724 + AluSg SINE Alu 1 305 -5 601 152 121 42 chr20 57806475 57806640 -14347242 + L1M4 LINE L1 5106 5283 -863 1736 169 0 13 chr20 57806643 57806951 -14346931 + AluJb SINE Alu 1 304 -8 2234 61 27 3 chr20 57806962 57807256 -14346626 + AluY SINE Alu 1 301 -10 312 135 87 135 chr20 57807256 57807360 -14346522 + L1MB3 LINE L1 6074 6172 -11 226 245 149 11 chr20 57807496 57807590 -14346292 - L2 LINE L2 -1 3312 3206 1837 148 0 0 chr20 57807677 57807975 -14345907 + AluSx SINE Alu 1 298 -14 2742 16 0 0 chr20 57808508 57808819 -14345063 + AluYa5 SINE Alu 1 311 0 300 195 12 73 chr20 57809772 57809854 -14344028 - MIR3 SINE MIR -7 201 125 2052 89 0 54 chr20 57809968 57810284 -14343598 + AluSq SINE Alu 1 299 -14 238 225 62 38 chr20 57810300 57810380 -14343502 - MIR SINE MIR -29 233 152 1573 170 14 10 chr20 57811696 57811984 -14341898 - AluJb SINE Alu -23 289 1 1964 112 0 53 chr20 57812018 57812341 -14341541 + AluSx SINE Alu 1 306 -6 2030 95 50 0 chr20 57812736 57813019 -14340863 + AluSg SINE Alu 1 297 -13 2143 102 14 0 chr20 57813560 57813855 -14340027 + AluSq SINE Alu 1 299 -14 432 200 0 0 chr20 57814370 57814450 -14339432 + MER116 DNA Mariner 1 80 0 2064 115 0 40 chr20 57814465 57814788 -14339094 - AluSg SINE Alu 0 310 1 1137 146 28 19 chr20 57814953 57815165 -14338717 + AluJo SINE Alu 87 300 -12 543 209 179 36 chr20 57816268 57816464 -14337418 - MIR SINE MIR -33 229 6 334 188 17 34 chr20 57817818 57817935 -14335947 + (CCG)n Simple_repeat Simple_repeat 3 117 0 268 149 0 81 chr20 57817954 57818028 -14335854 + (CGGGGG)n Simple_repeat Simple_repeat 4 71 0 253 67 22 22 chr20 57818316 57818361 -14335521 + (TTCA)n Simple_repeat Simple_repeat 3 47 0 778 272 127 31 chr20 57818364 57818783 -14335099 - L2 LINE L2 -40 3273 2815 332 292 104 47 chr20 57818845 57819037 -14334845 - MIR SINE MIR -59 203 1 695 164 131 38 chr20 57819401 57819584 -14334298 + MIR SINE MIR 28 227 -35 541 303 31 10 chr20 57819652 57819847 -14334035 + MIR SINE MIR 21 219 -43 449 267 53 66 chr20 57819930 57820097 -14333785 - L1MC4 LINE L1 -9 8033 7870 1820 143 0 7 chr20 57820097 57820384 -14333498 + AluJb SINE Alu 17 301 -11 449 267 53 66 chr20 57820384 57820519 -14333363 - L1MC4 LINE L1 -172 7870 7735 2065 105 0 32 chr20 57820640 57820954 -14332928 + AluSx SINE Alu 1 304 -8 1081 132 0 6 chr20 57820954 57821121 -14332761 + AluSg/x SINE Alu 132 297 -13 2044 113 7 0 chr20 57821131 57821432 -14332450 - AluSp SINE Alu -9 304 2 999 233 70 43 chr20 57821599 57821900 -14331982 + L2 LINE L2 2999 3307 -6 531 315 75 5 chr20 57822213 57822426 -14331456 + MIR SINE MIR 23 250 -12 196 286 36 0 chr20 57822448 57822504 -14331378 - L2 LINE L2 -540 2774 2717 2294 97 0 3 chr20 57822614 57822923 -14330959 + AluSq SINE Alu 1 308 -5 398 255 125 47 chr20 57822946 57823093 -14330789 + MLT1I LTR MaLR 200 367 -42 2143 103 3 0 chr20 57823093 57823385 -14330497 - AluSx SINE Alu -19 293 1 398 255 125 47 chr20 57823385 57823429 -14330453 + MLT1I LTR MaLR 367 406 -3 232 318 39 28 chr20 57823434 57823613 -14330269 - L1ME LINE L1 -257 5905 5725 631 191 39 103 chr20 57823623 57823827 -14330055 + MER46C DNA MER2_type 3 193 -145 1167 116 0 0 chr20 57823838 57824010 -14329872 - AluJb SINE Alu 0 312 141 2309 86 3 0 chr20 57824107 57824411 -14329471 - AluSp SINE Alu -8 305 1 334 217 0 14 chr20 57824413 57824482 -14329400 + MER46C DNA MER2_type 268 335 -3 1389 222 184 33 chr20 57824510 57824648 -14329234 + MLT1G1 LTR MaLR 1 117 -478 2068 117 0 40 chr20 57824648 57824973 -14328909 + AluSx SINE Alu 1 312 0 1389 222 184 33 chr20 57824973 57825351 -14328531 + MLT1G1 LTR MaLR 117 595 0 1992 129 0 29 chr20 57825357 57825668 -14328214 - AluSx SINE Alu -10 302 1 316 294 38 28 chr20 57825681 57825908 -14327974 - L1ME LINE L1 -531 5639 5461 1975 156 0 6 chr20 57826019 57826340 -14327542 + 7SLRNA srpRNA srpRNA 1 319 -1 1823 119 91 0 chr20 57826354 57826639 -14327243 + AluSq SINE Alu 3 313 0 1962 114 0 60 chr20 57826787 57827103 -14326779 + AluSx SINE Alu 1 297 -15 204 294 0 20 chr20 57827107 57827158 -14326724 - L2 LINE L2 -16 3297 3248 690 313 89 40 chr20 57827275 57827646 -14326236 + MLT1K LTR MaLR 86 474 -114 413 242 16 16 chr20 57827702 57827830 -14326052 - L1ME3A LINE L1 0 6170 6043 248 118 59 15 chr20 57827831 57827899 -14325983 + (TATATG)n Simple_repeat Simple_repeat 1 71 0 2035 158 13 40 chr20 57827905 57827999 -14325883 + MER47A DNA MER2_type 4 99 -2224 2081 117 3 3 chr20 57827999 57828306 -14325576 + AluSx SINE Alu 1 307 -5 2035 158 13 40 chr20 57828306 57828584 -14325298 + MER47A DNA MER2_type 99 366 0 740 242 19 28 chr20 57828584 57828788 -14325094 - L1ME3A LINE L1 -270 5900 5697 1075 251 131 62 chr20 57828844 57829279 -14324603 - MLT1K LTR MaLR -114 474 10 2196 91 0 10 chr20 57829451 57829759 -14324123 - AluSx SINE Alu -7 305 1 31 26 0 0 chr20 57830183 57830221 -14323661 + AT_rich Low_complexity Low_complexity 1 38 0 581 214 0 0 chr20 57830221 57830324 -14323558 - FLAM_C SINE Alu -22 121 19 1973 139 3 0 chr20 57830346 57830649 -14323233 + AluSx SINE Alu 1 304 -8 262 154 0 0 chr20 57830673 57830712 -14323170 - MIR SINE MIR -21 241 203 2070 127 0 0 chr20 57830725 57831024 -14322858 + AluSq SINE Alu 1 299 -14 2068 124 3 0 chr20 57831031 57831330 -14322552 + AluSx SINE Alu 3 302 -10 1710 143 3 23 chr20 57831341 57831641 -14322241 + AluSx SINE Alu 1 294 -18 565 243 9 0 chr20 57831667 57831778 -14322104 - MIR SINE MIR -75 187 76 336 280 47 19 chr20 57831850 57831957 -14321925 + L2 LINE L2 3204 3313 0 1474 167 29 14 chr20 57832088 57832363 -14321519 - AluJb SINE Alu -11 301 23 1838 157 10 0 chr20 57832371 57832664 -14321218 - AluSx SINE Alu -16 296 1 877 277 0 0 chr20 57832665 57832853 -14321029 - MER58A DNA MER1_type -32 192 5 2110 119 0 0 chr20 57832946 57833249 -14320633 - AluSx SINE Alu -9 303 1 1805 115 19 0 chr20 57833399 57833660 -14320222 - AluSx SINE Alu -8 304 39 1988 131 0 0 chr20 57834283 57834581 -14319301 + AluSx SINE Alu 1 298 -14 2183 105 0 6 chr20 57834649 57834963 -14318919 - AluSx SINE Alu 0 312 1 1311 152 23 134 chr20 57835347 57835690 -14318192 + AluYb8 SINE Alu 1 305 -3 1062 145 11 0 chr20 57835690 57835869 -14318013 + AluSg/x SINE Alu 120 300 -12 2279 86 0 3 chr20 57835943 57836245 -14317637 + AluY SINE Alu 1 301 -10 1777 115 0 0 chr20 57836299 57836551 -14317331 + AluSc SINE Alu 58 309 0 23 0 0 0 chr20 57836551 57836574 -14317308 + AT_rich Low_complexity Low_complexity 1 23 0 1956 131 10 0 chr20 57836595 57836893 -14316989 - AluSx SINE Alu -1 311 11 344 95 0 135 chr20 57836932 57837006 -14316876 - FAM SINE Alu 0 179 116 960 124 7 0 chr20 57837006 57837159 -14316723 - LTR24C LTR ERV1 -27 608 455 874 166 0 26 chr20 57837159 57837310 -14316572 - FRAM SINE Alu -21 155 9 2251 109 109 39 chr20 57837319 57837560 -14316322 - LTR24C LTR ERV1 -174 461 238 2175 68 6 59 chr20 57837560 57837881 -14316001 - AluSc SINE Alu -5 304 1 2251 109 109 39 chr20 57837881 57838070 -14315812 - LTR24C LTR ERV1 -397 238 1 311 135 19 0 chr20 57838151 57838203 -14315679 - MER4A LTR ERV1 -351 313 261 660 121 0 10 chr20 57838203 57838302 -14315580 - MER4A LTR ERV1 -566 98 1 2149 93 7 23 chr20 57838331 57838641 -14315241 + AluSx SINE Alu 3 307 -5 577 120 35 106 chr20 57838666 57838747 -14315135 + L1MB8 LINE L1 5727 5812 -362 261 0 0 0 chr20 57838747 57838776 -14315106 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 1559 172 20 27 chr20 57838781 57839077 -14314805 + AluJb SINE Alu 1 294 -18 577 120 35 106 chr20 57839077 57839131 -14314751 + L1MB8 LINE L1 5816 5858 -316 409 138 0 0 chr20 57839156 57839214 -14314668 - FRAM/FAM SINE Alu -99 77 20 1628 184 3 3 chr20 57839243 57839547 -14314335 - AluJo SINE Alu -8 304 1 1627 133 34 43 chr20 57839555 57839813 -14314069 + L1MB8 LINE L1 5855 6111 -67 2087 108 7 0 chr20 57839813 57840108 -14313774 - AluSx SINE Alu -14 298 2 1627 133 34 43 chr20 57840108 57840171 -14313711 + L1MB8 LINE L1 6111 6173 -5 2326 44 7 10 chr20 57840207 57840504 -14313378 + AluY SINE Alu 1 296 -15 426 281 112 46 chr20 57840506 57840565 -14313317 - L1MC4a LINE L1 -1732 6076 6022 306 0 0 0 chr20 57840565 57840599 -14313283 + (CA)n Simple_repeat Simple_repeat 1 34 0 426 281 112 46 chr20 57840599 57840735 -14313147 - L1MC4a LINE L1 -1786 6022 5868 787 175 0 15 chr20 57840774 57840911 -14312971 - AluJo SINE Alu -176 136 2 1777 168 0 16 chr20 57840930 57841240 -14312642 - AluSx SINE Alu -3 309 5 797 224 263 24 chr20 57841241 57841652 -14312230 - L1MC4a LINE L1 -1984 5824 5316 971 185 0 0 chr20 57841808 57841981 -14311901 - FRAM SINE Alu -5 171 1 2110 168 3 14 chr20 57842072 57842441 -14311441 - MLT1A1 LTR MaLR 0 365 1 4689 204 122 94 chr20 57842442 57842536 -14311346 - MLT1A1-int LTR MaLR 0 1735 1645 1811 138 3 7 chr20 57842536 57842825 -14311057 + AluSx SINE Alu 15 302 -10 4689 204 122 94 chr20 57842825 57843665 -14310217 - MLT1A1-int LTR MaLR -90 1645 830 2190 111 0 0 chr20 57843665 57843963 -14309919 - AluSx SINE Alu -14 298 1 4689 204 122 94 chr20 57843963 57844080 -14309802 - MLT1A1-int LTR MaLR -905 830 718 1296 219 20 3 chr20 57844080 57844382 -14309500 - AluJo SINE Alu -5 307 1 4689 204 122 94 chr20 57844382 57844460 -14309422 - MLT1A1-int LTR MaLR -1017 718 644 2198 104 0 7 chr20 57844460 57844768 -14309114 - AluSx SINE Alu -6 306 1 4689 204 122 94 chr20 57844768 57844898 -14308984 - MLT1A1-int LTR MaLR -1091 644 519 1464 165 0 0 chr20 57844898 57845141 -14308741 + AluSx SINE Alu 61 303 -9 4689 204 122 94 chr20 57845141 57845402 -14308480 - MLT1A1-int LTR MaLR -1216 519 168 323 167 0 14 chr20 57845402 57845474 -14308408 + CT-rich Low_complexity Low_complexity 4 74 0 1753 169 14 0 chr20 57845481 57845777 -14308105 - AluJb SINE Alu -12 300 1 849 146 0 7 chr20 57845811 57845948 -14307934 + AluJo SINE Alu 1 136 -176 261 296 79 40 chr20 57845973 57846272 -14307610 + L2 LINE L2 2737 3052 -220 531 214 188 34 chr20 57846302 57846536 -14307346 - L2 LINE L2 -411 2903 2634 302 307 114 0 chr20 57846722 57846810 -14307072 + MIR SINE MIR 165 262 0 2190 77 3 27 chr20 57846843 57847143 -14306739 - AluSp SINE Alu -16 297 5 400 244 110 18 chr20 57847385 57847549 -14306333 - MIR3 SINE MIR 0 208 30 1979 144 7 0 chr20 57847577 57847882 -14306000 - AluSx SINE Alu -4 308 2 1956 122 0 32 chr20 57847939 57848250 -14305632 + AluSg SINE Alu 1 301 -9 361 259 95 9 chr20 57848406 57848522 -14305360 + L2 LINE L2 3188 3313 0 831 140 0 28 chr20 57848527 57848670 -14305212 + FLAM_C SINE Alu 1 139 -4 667 239 80 32 chr20 57848744 57848932 -14304950 + MER3 DNA MER1_type 1 197 -12 568 269 6 23 chr20 57849019 57849194 -14304688 - L1MC4a LINE L1 -1897 5911 5740 688 175 0 9 chr20 57849252 57849366 -14304516 - FLAM_C SINE Alu -29 114 2 29 28 0 0 chr20 57849367 57849403 -14304479 + AT_rich Low_complexity Low_complexity 1 36 0 2192 102 14 0 chr20 57849418 57849713 -14304169 + AluSx SINE Alu 1 299 -13 2272 92 0 3 chr20 57849713 57850018 -14303864 + AluSq SINE Alu 1 304 -9 1130 193 14 9 chr20 57850018 57850236 -14303646 - AluJo SINE Alu -30 282 64 225 94 0 0 chr20 57850366 57850398 -14303484 + (TC)n Simple_repeat Simple_repeat 1 32 0 1995 126 7 7 chr20 57850398 57850692 -14303190 - AluSx SINE Alu -18 294 1 1762 157 13 10 chr20 57850692 57850990 -14302892 - AluSx SINE Alu -12 300 1 283 241 0 36 chr20 57851021 57851104 -14302778 - MIR SINE MIR 0 262 183 839 163 0 46 chr20 57851115 57851268 -14302614 + FRAM SINE Alu 1 146 -30 1133 156 0 0 chr20 57851270 57851449 -14302433 - AluJb SINE Alu -11 301 123 520 294 37 0 chr20 57851508 57851644 -14302238 - MIR SINE MIR -95 167 27 408 206 68 96 chr20 57852392 57852538 -14301344 + MIR SINE MIR 16 157 -105 961 213 16 29 chr20 57852593 57852837 -14301045 - MER58B DNA MER1_type 0 341 101 2133 154 0 0 chr20 57852838 57853149 -14300733 - AluSx SINE Alu -1 311 1 2651 51 0 16 chr20 57853228 57853543 -14300339 - AluY SINE Alu -1 310 1 554 232 43 29 chr20 57853710 57853848 -14300034 + MIR SINE MIR 2 141 -121 2089 118 9 29 chr20 57854175 57854490 -14299392 + AluJo SINE Alu 1 309 -3 437 264 173 45 chr20 57854533 57854886 -14298996 - MLT1K LTR MaLR -1 587 190 705 130 0 89 chr20 57855742 57855888 -14297994 + AluJb SINE Alu 1 133 -179 21 36 0 0 chr20 57855888 57855916 -14297966 + AT_rich Low_complexity Low_complexity 1 28 0 2099 138 0 10 chr20 57855983 57856295 -14297587 - AluSx SINE Alu -3 309 1 288 242 158 67 chr20 57856418 57856538 -14297344 - L2 LINE L2 0 3272 3142 219 256 94 81 chr20 57856538 57856698 -14297184 - L2 LINE L2 -258 3014 2853 * 708 269 35 40 chr20 57856665 57856892 -14296990 - MIR SINE MIR -9 253 28 340 319 62 9 chr20 57857209 57857322 -14296560 + MIR3 SINE MIR 15 133 -75 218 312 195 0 chr20 57857592 57857669 -14296213 + L2 LINE L2 2267 2358 -956 860 185 74 0 chr20 57857669 57857831 -14296051 - AluJb SINE Alu -6 306 133 1437 146 7 80 chr20 57857961 57858236 -14295646 - AluSx SINE Alu -57 255 1 1232 225 82 63 chr20 57858296 57858582 -14295300 + MER69 DNA AcHobo 2 300 -2226 787 163 0 22 chr20 57858582 57858717 -14295165 - FLAM_A SINE Alu -1 132 1 1232 225 82 63 chr20 57858717 57858857 -14295025 + MER69 DNA AcHobo 300 436 -2090 1846 148 10 39 chr20 57858859 57859170 -14294712 + AluJb SINE Alu 6 307 -5 2595 65 0 3 chr20 57859183 57859493 -14294389 + AluY SINE Alu 1 309 -2 1897 169 3 3 chr20 57859903 57860199 -14293683 - AluSx SINE Alu -16 296 1 411 252 26 0 chr20 57860820 57860935 -14292947 - MER103 DNA DNA -3 163 46 2079 113 0 47 chr20 57860947 57861266 -14292616 + AluSq SINE Alu 1 304 -9 241 209 0 0 chr20 57861280 57861323 -14292559 + MIR SINE MIR 144 186 -76 323 237 68 17 chr20 57861364 57861482 -14292400 - MER46C DNA MER2_type -178 160 37 600 295 16 26 chr20 57861627 57861820 -14292062 - MIR SINE MIR -1 261 71 278 289 0 24 chr20 57861810 57861893 -14291989 + MIR SINE MIR 181 261 -1 * 1931 162 17 0 chr20 57861925 57862221 -14291661 - AluJo SINE Alu -11 301 1 1879 145 78 0 chr20 57862288 57862571 -14291311 + AluSx SINE Alu 1 305 -7 251 322 56 43 chr20 57862800 57863149 -14290733 + LTR16B LTR ERVL 38 462 -2 685 315 73 57 chr20 57863160 57863737 -14290145 + MLT1L LTR MaLR 23 608 -7 1904 119 41 0 chr20 57863935 57864204 -14289678 + AluSx SINE Alu 22 301 -11 5634 111 16 54 chr20 57864239 57864446 -14289436 + MER4D LTR ERV1 1 214 -689 2468 88 0 0 chr20 57864446 57864753 -14289129 + AluSx SINE Alu 1 307 -5 5634 111 16 54 chr20 57864753 57865131 -14288751 + MER4D LTR ERV1 214 539 -364 1742 169 30 3 chr20 57865131 57865433 -14288449 - AluJb SINE Alu -2 310 1 5634 111 16 54 chr20 57865433 57865785 -14288097 + MER4D LTR ERV1 539 903 0 2448 90 0 0 chr20 57865832 57866133 -14287749 - AluSq SINE Alu -12 301 1 362 307 121 35 chr20 57866183 57866285 -14287597 + L2 LINE L2 2804 2896 -417 3195 174 61 21 chr20 57866285 57866404 -14287478 - MER41B LTR ERV1 0 635 522 2243 110 0 22 chr20 57866404 57866723 -14287159 + AluSx SINE Alu 1 312 0 3195 174 61 21 chr20 57866723 57867214 -14286668 - MER41B LTR ERV1 -113 522 1 362 307 121 35 chr20 57867214 57867342 -14286540 + L2 LINE L2 2896 3054 -259 2047 125 34 3 chr20 57867342 57867637 -14286245 - AluSx SINE Alu -8 304 1 2200 116 3 0 chr20 57867784 57868078 -14285804 - AluSx SINE Alu -17 295 1 588 261 124 0 chr20 57868078 57868239 -14285643 + MLT2E LTR ERVL 238 418 -210 2146 129 7 0 chr20 57868331 57868640 -14285242 - AluSx SINE Alu 0 312 2 2289 46 68 7 chr20 57868727 57869008 -14284874 - AluY SINE Alu -12 299 2 200 368 88 44 chr20 57869009 57869123 -14284759 - MIR3 SINE MIR -29 179 61 361 121 0 0 chr20 57869123 57869181 -14284701 + Alu SINE Alu 242 299 -1 667 244 220 72 chr20 57869558 57869712 -14284170 - MLT1L LTR MaLR -8 607 477 3989 111 6 0 chr20 57869712 57870261 -14283621 - MER41A LTR ERV1 0 554 3 667 244 220 72 chr20 57870261 57870605 -14283277 - MLT1L LTR MaLR -138 477 35 465 134 0 49 chr20 57870641 57870723 -14283159 + MADE1 DNA Mariner 2 79 -1 1877 146 25 0 chr20 57870726 57871007 -14282875 - AluJb SINE Alu -16 296 9 1201 294 50 22 chr20 57871207 57871667 -14282215 + MLT1K LTR MaLR 1 473 -3 832 131 46 31 chr20 57871681 57871811 -14282071 + AluJo/FLAM SINE Alu 1 132 -170 2574 78 0 0 chr20 57871812 57872121 -14281761 + AluSc SINE Alu 1 309 0 663 223 173 33 chr20 57872801 57873102 -14280780 - MLT1K LTR MaLR -162 426 84 1587 234 35 23 chr20 57873112 57873332 -14280550 - LTR16C LTR ERVL 0 491 262 1468 185 176 12 chr20 57873332 57873672 -14280210 - MSTD LTR MaLR 0 396 1 1587 234 35 23 chr20 57873672 57873848 -14280034 - LTR16C LTR ERVL -229 262 90 392 264 148 7 chr20 57874038 57874193 -14279689 - MLT1J LTR MaLR -274 237 61 1824 169 3 36 chr20 57874195 57874503 -14279379 + AluJo SINE Alu 1 298 -14 344 260 0 0 chr20 57874733 57874806 -14279076 + MER81 DNA DNA 2 74 -40 1576 120 0 5 chr20 57875542 57875759 -14278123 - AluSg/x SINE Alu 0 312 97 909 188 66 47 chr20 57875765 57875978 -14277904 - MER20 DNA MER1_type -2 217 1 2375 78 0 0 chr20 57876015 57876309 -14277573 + AluY SINE Alu 1 294 -17 1118 175 28 9 chr20 57876687 57876898 -14276984 - MER20 DNA MER1_type 0 219 5 192 40 0 0 chr20 57876935 57876960 -14276922 + (TTA)n Simple_repeat Simple_repeat 2 26 0 2177 115 7 7 chr20 57876962 57877258 -14276624 - AluSx SINE Alu -16 296 1 320 315 41 48 chr20 57877359 57877370 -14276512 + MER5A DNA MER1_type 1 11 -178 2494 92 0 3 chr20 57877370 57877684 -14276198 - AluSq SINE Alu 0 313 1 320 315 41 48 chr20 57877684 57877818 -14276064 + MER5A DNA MER1_type 11 145 -44 846 155 0 0 chr20 57877942 57878058 -14275824 - FLAM_C SINE Alu -17 116 1 468 211 184 9 chr20 57878071 57878185 -14275697 - FAM SINE Alu -51 134 1 304 200 71 0 chr20 57878190 57878260 -14275622 - MIR SINE MIR -115 147 73 2090 133 7 0 chr20 57878264 57878564 -14275318 + AluJb SINE Alu 1 302 -10 2159 130 3 13 chr20 57878567 57878882 -14275000 + AluSx SINE Alu 1 312 0 264 306 0 0 chr20 57878886 57878994 -14274888 + A-rich Low_complexity Low_complexity 1 108 0 198 0 0 0 chr20 57879107 57879129 -14274753 + (CA)n Simple_repeat Simple_repeat 2 23 0 340 294 0 42 chr20 57879156 57879275 -14274607 - MLT1L LTR MaLR -485 130 17 30 0 0 0 chr20 57879927 57879957 -14273925 + AT_rich Low_complexity Low_complexity 1 30 0 1060 114 54 0 chr20 57880001 57880150 -14273732 + AluSg/x SINE Alu 135 291 -19 207 0 0 0 chr20 57880150 57880173 -14273709 + (GA)n Simple_repeat Simple_repeat 2 24 0 348 258 100 70 chr20 57880234 57880463 -14273419 - L2 LINE L2 -223 3049 2814 2251 107 10 7 chr20 57880707 57881016 -14272866 - AluSg SINE Alu 0 310 1 325 308 37 0 chr20 57881200 57881307 -14272575 - MIR SINE MIR -70 192 82 1655 172 0 46 chr20 57881318 57881475 -14272407 - AluJo SINE Alu -23 289 151 1926 144 3 39 chr20 57881475 57881787 -14272095 - AluSx SINE Alu -11 301 1 1655 172 0 46 chr20 57881787 57881932 -14271950 - AluJo SINE Alu -161 151 1 265 162 54 40 chr20 57881962 57882036 -14271846 - MIR SINE MIR -115 147 73 2675 166 16 91 chr20 57882036 57882122 -14271760 + L1MB8 LINE L1 5521 5612 -566 845 135 0 64 chr20 57882122 57882263 -14271619 + FLAM_C SINE Alu 2 133 0 2675 166 16 91 chr20 57882263 57882438 -14271444 + L1MB8 LINE L1 5612 5799 -379 2098 130 0 0 chr20 57882438 57882723 -14271159 - AluSx SINE Alu -27 285 1 2675 166 16 91 chr20 57882723 57882846 -14271036 + L1MB8 LINE L1 5799 5930 -248 2086 94 49 3 chr20 57882846 57883132 -14270750 + AluSg SINE Alu 1 299 -11 2675 166 16 91 chr20 57883132 57883451 -14270431 + L1MB8 LINE L1 5930 6173 -5 2094 123 3 0 chr20 57883484 57883811 -14270071 + AluSp SINE Alu 1 328 0 1988 138 0 0 chr20 57883818 57884127 -14269755 + AluSx SINE Alu 7 315 0 993 307 108 14 chr20 57884229 57884653 -14269229 - MLT1K LTR MaLR -69 519 56 250 263 13 26 chr20 57884685 57884761 -14269121 + MIR SINE MIR 27 101 -161 2254 122 3 3 chr20 57884762 57885074 -14268808 - AluSx SINE Alu 0 312 1 2238 103 0 0 chr20 57885081 57885392 -14268490 - AluSg SINE Alu 0 311 1 2654 61 0 0 chr20 57885470 57885780 -14268102 - AluY SINE Alu -1 310 1 320 253 126 9 chr20 57885861 57885974 -14267908 + MIR3 SINE MIR 28 154 -54 568 265 24 49 chr20 57886205 57886492 -14267390 - L1MC4 LINE L1 -6 8036 7757 * 642 193 158 126 chr20 57886486 57886552 -14267330 - L1MC4 LINE L1 -178 7864 7802 2315 113 3 0 chr20 57886552 57886853 -14267029 + AluSx SINE Alu 1 302 -10 642 193 158 126 chr20 57886853 57887014 -14266868 - L1MC4 LINE L1 -240 7802 7620 2291 125 0 0 chr20 57887014 57887326 -14266556 - AluSx SINE Alu 0 312 1 642 193 158 126 chr20 57887326 57887445 -14266437 - L1MC4 LINE L1 -422 7620 7506 377 256 194 72 chr20 57887460 57887727 -14266155 - MLT1G3 LTR MaLR -83 507 149 2025 147 3 19 chr20 57887737 57887912 -14265970 - AluSx SINE Alu -4 308 139 2227 110 0 3 chr20 57887912 57888203 -14265679 - AluSx SINE Alu -22 290 1 2025 147 3 19 chr20 57888203 57888340 -14265542 - AluSx SINE Alu -173 139 1 333 232 49 0 chr20 57888411 57888493 -14265389 - AluSg/x SINE Alu -94 208 123 301 191 60 71 chr20 57888495 57888579 -14265303 + L1MCa LINE L1 1996 2078 -4348 26 0 0 0 chr20 57888579 57888605 -14265277 + AT_rich Low_complexity Low_complexity 1 26 0 846 152 0 14 chr20 57888605 57888743 -14265139 - AluJo SINE Alu -176 136 1 1040 251 23 36 chr20 57888744 57888936 -14264946 + L2 LINE L2 2971 3159 -154 1872 184 7 0 chr20 57888936 57889240 -14264642 - AluJo SINE Alu -5 307 2 1040 251 23 36 chr20 57889240 57889354 -14264528 + L2 LINE L2 3159 3273 -40 228 100 0 0 chr20 57889360 57889400 -14264482 + (TGAA)n Simple_repeat Simple_repeat 1 40 0 2318 100 13 0 chr20 57889478 57889778 -14264104 + AluSp SINE Alu 1 304 -9 989 188 56 56 chr20 57890161 57890464 -14263418 - L1ME3A LINE L1 -8 6162 5860 1907 105 4 0 chr20 57890587 57890835 -14263047 + AluSx SINE Alu 34 282 -30 353 0 64 0 chr20 57890839 57890886 -14262996 + (TAAAA)n Simple_repeat Simple_repeat 2 51 0 460 287 90 12 chr20 57890899 57891066 -14262816 - MIR SINE MIR -74 188 9 455 336 43 25 chr20 57891076 57891311 -14262571 - MIR SINE MIR 0 262 24 2236 124 0 0 chr20 57891374 57891672 -14262210 + AluSx SINE Alu 11 308 -4 561 250 12 19 chr20 57891752 57891912 -14261970 + MLT1J LTR MaLR 6 164 -347 1552 154 0 28 chr20 57892033 57892280 -14261602 + AluJb SINE Alu 45 284 -28 411 107 19 29 chr20 57892293 57892396 -14261486 + (TCTA)n Simple_repeat Simple_repeat 4 105 0 330 155 0 33 chr20 57892455 57892687 -14261195 + AluJo SINE Alu 11 296 -6 25 31 0 0 chr20 57892895 57892927 -14260955 + AT_rich Low_complexity Low_complexity 1 32 0 658 260 78 78 chr20 57892974 57893401 -14260481 + MLT1K LTR MaLR 10 436 -152 2198 128 7 7 chr20 57893401 57893706 -14260176 - AluSx SINE Alu -3 309 5 658 260 78 78 chr20 57893706 57893741 -14260141 + MLT1K LTR MaLR 436 470 -118 1586 241 57 30 chr20 57893741 57894215 -14259667 + LTR16C LTR ERVL 1 487 -4 658 260 78 78 chr20 57894215 57894254 -14259628 + MLT1K LTR MaLR 470 570 -18 207 0 0 0 chr20 57894744 57894767 -14259115 + (TTCA)n Simple_repeat Simple_repeat 1 23 0 2304 101 17 3 chr20 57894844 57895140 -14258742 - AluSx SINE Alu -12 300 1 1717 150 61 10 chr20 57895603 57895897 -14257985 + AluJo SINE Alu 1 309 -3 350 320 59 34 chr20 57896036 57896384 -14257498 - L2 LINE L2 -203 3069 2716 2233 113 3 3 chr20 57896398 57896700 -14257182 - AluSq SINE Alu -11 302 1 272 245 51 61 chr20 57896700 57896792 -14257090 - MIR SINE MIR -8 254 164 581 225 0 31 chr20 57896805 57896934 -14256948 + MIR SINE MIR 87 211 -51 462 232 0 0 chr20 57896951 57897033 -14256849 - MIR SINE MIR -105 157 76 353 290 89 56 chr20 57897264 57897363 -14256519 - L1MC4a LINE L1 -344 5826 5732 890 150 0 0 chr20 57897363 57897496 -14256386 - FLAM_C SINE Alu 0 133 1 2144 87 52 7 chr20 57897505 57897791 -14256091 - AluSx SINE Alu -2 310 12 353 290 89 56 chr20 57897791 57898004 -14255878 - L1MC4a LINE L1 -445 5725 5597 999 202 31 14 chr20 57898080 57898303 -14255579 - MIR SINE MIR -23 239 13 252 333 39 0 chr20 57898312 57898465 -14255417 - L1MC4a LINE L1 -678 5496 5338 1779 179 3 23 chr20 57898579 57898881 -14255001 + AluJo SINE Alu 3 298 -14 638 150 30 0 chr20 57898881 57898981 -14254901 + U6 snRNA snRNA 1 103 -4 835 277 67 0 chr20 57899190 57899414 -14254468 + L2 LINE L2 2831 3069 -244 1768 182 0 0 chr20 57899576 57899872 -14254010 + AluJo SINE Alu 1 296 -16 2303 83 0 3 chr20 57899874 57900200 -14253682 + AluY SINE Alu 1 311 0 2122 120 0 0 chr20 57900208 57900527 -14253355 - AluSx SINE Alu 0 319 1 196 174 72 43 chr20 57900753 57900805 -14253077 + MIR SINE MIR 101 157 -105 2196 139 0 0 chr20 57900805 57901108 -14252774 + AluSx SINE Alu 2 304 -8 196 174 72 43 chr20 57901108 57901124 -14252758 + MIR SINE MIR 157 171 -91 361 221 204 18 chr20 57901197 57901310 -14252572 + MIR SINE MIR 29 162 -100 688 260 107 41 chr20 57901429 57901748 -14252134 - MLT1L LTR MaLR -128 487 148 256 290 151 0 chr20 57901818 57901911 -14251971 + MIR SINE MIR 156 262 0 1682 124 0 0 chr20 57901918 57902151 -14251731 - MER46A DNA MER2_type 0 236 4 1879 142 17 17 chr20 57902155 57902457 -14251425 - AluJb SINE Alu -10 302 1 440 295 103 0 chr20 57902502 57902658 -14251224 + MIR SINE MIR 28 199 -63 1146 216 64 36 chr20 57902712 57903123 -14250759 + MLT1K LTR MaLR 85 564 -24 1582 145 41 48 chr20 57903313 57903603 -14250279 + AluJo SINE Alu 22 309 -3 195 256 122 11 chr20 57903823 57903913 -14249969 + L2 LINE L2 3210 3309 -4 428 66 0 0 chr20 57904378 57904439 -14249443 + AluSp/q SINE Alu 246 306 -7 896 269 56 8 chr20 57904608 57904857 -14249025 - MIR SINE MIR 0 262 2 1281 131 4 80 chr20 57905055 57905292 -14248590 - AluJb SINE Alu -7 305 87 2477 67 6 19 chr20 57905460 57905772 -14248110 + AluSq SINE Alu 1 308 -5 498 212 36 6 chr20 57905826 57905954 -14247928 - MIR SINE MIR -79 129 3 1041 256 70 0 chr20 57906064 57906325 -14247557 - MLT1E2 LTR MaLR -58 568 286 2440 65 0 3 chr20 57906325 57906618 -14247264 - AluY SINE Alu -19 292 1 2202 87 26 23 chr20 57906946 57907255 -14246627 + AluSq SINE Alu 1 310 -3 1788 173 7 3 chr20 57907271 57907577 -14246305 + AluJb SINE Alu 1 307 -5 1440 193 48 0 chr20 57907784 57908074 -14245808 + L1MB7 LINE L1 5863 6166 -18 27 0 0 0 chr20 57908074 57908101 -14245781 + AT_rich Low_complexity Low_complexity 1 27 0 2036 146 7 0 chr20 57908101 57908389 -14245493 - AluSx SINE Alu -20 292 3 642 293 85 9 chr20 57908552 57908854 -14245028 - L2 LINE L2 -296 3017 2686 1947 140 3 40 chr20 57908854 57909176 -14244706 + AluJb SINE Alu 1 310 -2 1865 192 9 3 chr20 57909216 57909550 -14244332 + MER7A DNA MER2_type 13 346 0 1599 157 45 45 chr20 57909902 57910022 -14243860 + AluSx SINE Alu 1 120 -192 2248 100 0 0 chr20 57910022 57910337 -14243545 - AluSc SINE Alu 0 315 1 1599 157 45 45 chr20 57910337 57910527 -14243355 + AluSx SINE Alu 119 312 0 861 130 0 0 chr20 57910527 57910645 -14243237 - AluJb SINE Alu -194 118 1 1219 248 72 39 chr20 57911120 57911551 -14242331 - HAL1 LINE L1 0 2507 2063 1264 125 0 0 chr20 57911553 57911729 -14242153 - AluSg/x SINE Alu -3 307 132 576 153 0 0 chr20 57911853 57911938 -14241944 - AluS SINE Alu -226 86 2 2447 83 3 0 chr20 57912172 57912473 -14241409 + AluSp SINE Alu 1 302 -11 1760 204 21 59 chr20 57912514 57912711 -14241171 + MLT1D LTR MaLR 2 205 -300 2181 102 10 0 chr20 57912711 57913004 -14240878 + AluSx SINE Alu 1 296 -16 1760 204 21 59 chr20 57913004 57913282 -14240600 + MLT1D LTR MaLR 205 459 -46 390 209 23 0 chr20 57913269 57913355 -14240527 + MLT2F LTR ERVL 576 663 0 * 2284 99 7 0 chr20 57913409 57913693 -14240189 + AluSx SINE Alu 1 286 -26 2216 108 14 3 chr20 57913703 57914000 -14239882 + AluSc SINE Alu 1 300 -9 939 187 86 0 chr20 57914000 57914198 -14239684 + MER58B DNA MER1_type 110 324 -17 322 205 116 0 chr20 57914199 57914311 -14239571 - L2 LINE L2 -256 3057 2933 360 203 293 8 chr20 57914967 57915090 -14238792 + MIR SINE MIR 12 169 -93 577 263 169 32 chr20 57915267 57915545 -14238337 + L2 LINE L2 2430 2745 -569 770 316 88 19 chr20 57915566 57915984 -14237898 - L2 LINE L2 0 3313 2867 300 192 254 40 chr20 57916067 57916244 -14237638 - L2 LINE L2 -540 2774 2560 195 293 24 12 chr20 57916312 57916394 -14237488 + L2 LINE L2 3189 3271 -1 23 78 0 0 chr20 57916864 57916915 -14236967 + GC_rich Low_complexity Low_complexity 1 51 0 24 53 0 0 chr20 57917034 57917072 -14236810 + GC_rich Low_complexity Low_complexity 1 38 0 204 314 15 51 chr20 57917426 57917563 -14236319 - L2 LINE L2 -6 3307 3176 1006 59 22 15 chr20 57917601 57917737 -14236145 - MER85 DNA T2_type -2 137 1 231 310 125 16 chr20 57918262 57918446 -14235436 + MIR SINE MIR 46 249 -13 2044 134 20 0 chr20 57919537 57919829 -14234053 + AluSx SINE Alu 1 298 -14 341 220 0 59 chr20 57920077 57920195 -14233687 + MER113 DNA MER1_type? 6 116 -405 2235 132 0 0 chr20 57920208 57920519 -14233363 + AluSx SINE Alu 1 311 -1 180 336 101 8 chr20 57920522 57920641 -14233241 - MIR3 SINE MIR -48 160 31 186 43 0 0 chr20 57920699 57920722 -14233160 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2369 91 0 0 chr20 57920801 57921098 -14232784 - AluY SINE Alu -14 297 1 2003 90 47 43 chr20 57921116 57921415 -14232467 + AluSq SINE Alu 1 300 -13 21 0 0 0 chr20 57921525 57921546 -14232336 + AT_rich Low_complexity Low_complexity 1 21 0 460 151 14 0 chr20 57921642 57921715 -14232167 + AluJo SINE Alu 62 135 -177 2336 123 0 0 chr20 57922550 57922859 -14231023 - AluSx SINE Alu -1 311 3 3995 169 62 30 chr20 57923642 57924277 -14229605 - L1MB5 LINE L1 -36 6138 5525 2024 132 3 26 chr20 57924277 57924580 -14229302 + AluSx SINE Alu 1 296 -16 3995 169 62 30 chr20 57924580 57924611 -14229271 - L1MB5 LINE L1 -649 5525 5496 2247 109 7 0 chr20 57924611 57924915 -14228967 - AluSx SINE Alu -6 306 1 3995 169 62 30 chr20 57924915 57925170 -14228712 - L1MB5 LINE L1 -678 5496 5188 22 0 0 0 chr20 57925496 57925518 -14228364 + AT_rich Low_complexity Low_complexity 1 22 0 294 286 129 33 chr20 57926008 57926218 -14227664 + MIR SINE MIR 14 243 -19 25 31 0 0 chr20 57926508 57926540 -14227342 + AT_rich Low_complexity Low_complexity 1 32 0 1830 172 0 7 chr20 57926573 57926863 -14227019 + AluJb SINE Alu 1 288 -24 478 284 45 11 chr20 57927248 57927424 -14226458 - MIR SINE MIR 0 262 81 1239 214 84 114 chr20 57928750 57929380 -14224502 + MLT1L LTR MaLR 5 615 0 2012 141 0 7 chr20 57929429 57929734 -14224148 + AluSx SINE Alu 1 303 -9 363 313 77 39 chr20 57929760 57930019 -14223863 - MLT1K LTR MaLR -76 512 244 2247 115 7 0 chr20 57931008 57931312 -14222570 - AluSx SINE Alu -6 306 1 2303 116 0 3 chr20 57931391 57931701 -14222181 + AluSx SINE Alu 1 309 -3 379 123 18 0 chr20 57932066 57932123 -14221759 + U7 snRNA snRNA 5 62 -1 2485 88 0 3 chr20 57932144 57932452 -14221430 - AluSq SINE Alu -6 307 1 974 97 8 0 chr20 57932469 57932593 -14221289 - AluSp SINE Alu -188 125 1 25 31 0 0 chr20 57932593 57932625 -14221257 + AT_rich Low_complexity Low_complexity 1 32 0 2129 126 0 3 chr20 57932626 57932941 -14220941 + AluSx SINE Alu 1 314 0 253 284 11 11 chr20 57932983 57933071 -14220811 + (TATG)n Simple_repeat Simple_repeat 2 89 0 2340 77 7 20 chr20 57933308 57933608 -14220274 + AluY SINE Alu 1 296 -15 372 22 0 0 chr20 57935473 57935518 -14218364 + (TC)n Simple_repeat Simple_repeat 1 45 0 2196 125 0 0 chr20 57936977 57937273 -14216609 - AluSg SINE Alu -13 297 2 249 215 31 0 chr20 57937921 57937986 -14215896 + Charlie7 DNA MER1_type 35 101 -2511 1370 105 0 0 chr20 57938037 57938208 -14215674 + AluSx SINE Alu 1 171 -141 423 0 0 0 chr20 57938210 57938257 -14215625 + (TC)n Simple_repeat Simple_repeat 2 48 0 815 123 0 53 chr20 57938257 57938565 -14215317 + (TA)n Simple_repeat Simple_repeat 1 291 0 536 271 70 78 chr20 57938973 57939257 -14214625 + L1ME LINE L1 5383 5664 -457 243 283 107 0 chr20 57939294 57939407 -14214475 + L1ME LINE L1 5653 5782 -380 1622 123 11 42 chr20 57939424 57939708 -14214174 - L1MB7 LINE L1 -25 6159 5885 3126 160 107 32 chr20 57939708 57939750 -14214132 - L1MB8 LINE L1 -6 6172 6135 2109 100 62 7 chr20 57939750 57940040 -14213842 - AluSx SINE Alu -6 306 1 3126 160 107 32 chr20 57940040 57940413 -14213469 - L1MB8 LINE L1 -43 6135 5688 1943 137 25 0 chr20 57940413 57940697 -14213185 - AluSx SINE Alu -21 291 1 3126 160 107 32 chr20 57940697 57940937 -14212945 - L1MB8 LINE L1 -490 5688 5467 2015 112 8 23 chr20 57940937 57941477 -14212405 + MER4A LTR ERV1 1 664 0 876 136 0 3 chr20 57941477 57941614 -14212268 - L1MB8 LINE L1 -709 5469 5336 2053 105 9 49 chr20 57941614 57941939 -14211943 - AluSx SINE Alu 0 312 1 876 136 0 3 chr20 57941939 57941958 -14211924 - L1MB8 LINE L1 -842 5336 5318 22 0 0 0 chr20 57942080 57942102 -14211780 + AT_rich Low_complexity Low_complexity 1 22 0 218 179 0 0 chr20 57942115 57942154 -14211728 + (CA)n Simple_repeat Simple_repeat 1 39 0 199 232 37 85 chr20 57942894 57942976 -14210906 - MER5B DNA MER1_type -96 82 5 799 100 92 0 chr20 57943449 57943569 -14210313 + MER4B LTR ERV1 440 570 -40 362 309 12 88 chr20 57944056 57944284 -14209598 - MIR SINE MIR -51 211 3 27 0 0 0 chr20 57944643 57944670 -14209212 + AT_rich Low_complexity Low_complexity 1 27 0 988 98 8 8 chr20 57944904 57945037 -14208845 + AluJb SINE Alu 1 133 -179 2079 127 0 19 chr20 57945093 57945400 -14208482 + AluJb SINE Alu 1 301 -11 227 160 80 0 chr20 57945580 57945630 -14208252 + MER113 DNA MER1_type? 65 118 -403 2209 122 0 13 chr20 57945652 57945963 -14207919 - AluSx SINE Alu -3 309 3 837 136 0 30 chr20 57945967 57946099 -14207783 - AluJb SINE Alu -173 139 12 222 62 0 0 chr20 57946111 57946143 -14207739 + (TTTTA)n Simple_repeat Simple_repeat 3 34 0 2144 116 0 0 chr20 57946162 57946438 -14207444 - AluSg SINE Alu -34 276 1 332 302 80 19 chr20 57946521 57946733 -14207149 + MER113 DNA MER1_type? 254 478 -43 1201 236 63 44 chr20 57946791 57947235 -14206647 - MLT1C LTR MaLR -6 453 7 1906 165 88 10 chr20 57947832 57948219 -14205663 + MSTB1 LTR MaLR 1 417 -15 1750 145 0 66 chr20 57948572 57948911 -14204971 + AluJo SINE Alu 1 319 0 189 0 0 0 chr20 57949276 57949297 -14204585 + (CAG)n Simple_repeat Simple_repeat 2 22 0 2266 109 0 13 chr20 57949898 57950209 -14203673 - AluSx SINE Alu -5 307 1 2205 115 0 29 chr20 57950702 57951016 -14202866 + AluSx SINE Alu 1 305 -7 26 30 0 0 chr20 57951037 57951070 -14202812 + AT_rich Low_complexity Low_complexity 1 33 0 219 69 0 0 chr20 57951442 57951471 -14202411 + (T)n Simple_repeat Simple_repeat 1 29 0 21 0 0 0 chr20 57951662 57951683 -14202199 + AT_rich Low_complexity Low_complexity 1 21 0 2202 89 6 51 chr20 57951978 57952294 -14201588 - AluSp SINE Alu -11 302 1 834 261 48 66 chr20 57956178 57956512 -14197370 - MER102a DNA MER1_type -2 328 1 1066 121 12 12 chr20 57956927 57957092 -14196790 - MER4B LTR ERV1 -27 583 419 1754 137 12 4 chr20 57957257 57957512 -14196370 - AluJo SINE Alu -55 257 1 204 283 0 0 chr20 57957694 57957747 -14196135 + CT-rich Low_complexity Low_complexity 2 54 0 402 250 120 47 chr20 57958310 57958622 -14195260 + L2 LINE L2 2790 3119 -194 691 225 115 15 chr20 57958688 57958888 -14194994 + MIR SINE MIR 16 235 -27 1962 126 7 14 chr20 57959870 57960163 -14193719 - AluJo SINE Alu -21 291 1 588 286 24 6 chr20 57960193 57960361 -14193521 - MER5A DNA MER1_type -1 188 18 2468 74 3 0 chr20 57960610 57960909 -14192973 + AluSx SINE Alu 1 300 -12 588 164 320 0 chr20 57960911 57961039 -14192843 + AluJb SINE Alu 134 302 -10 270 226 0 0 chr20 57961161 57961214 -14192668 + FLAM SINE Alu 61 113 -20 2319 116 0 0 chr20 57961506 57961809 -14192073 + AluSx SINE Alu 1 303 -9 299 248 80 8 chr20 57962009 57962134 -14191748 - L1ME4a LINE L1 -3 6118 5985 2339 108 7 0 chr20 57962746 57963053 -14190829 + AluSx SINE Alu 1 309 -3 303 298 29 10 chr20 57964009 57964113 -14189769 + MIR SINE MIR 36 141 -67 265 228 218 0 chr20 57964358 57964459 -14189423 + MER103 DNA DNA 37 159 -7 2197 127 0 13 chr20 57964505 57964813 -14189069 + AluSx SINE Alu 1 304 -8 383 336 0 0 chr20 57964877 57964987 -14188895 - L2 LINE L2 0 3313 3204 192 227 153 113 chr20 57965208 57965352 -14188530 - L2 LINE L2 -455 2859 2701 1828 162 4 0 chr20 57965352 57965624 -14188258 + AluJb SINE Alu 21 293 -19 192 227 153 113 chr20 57965624 57965708 -14188174 - L2 LINE L2 -613 2701 2622 582 275 65 106 chr20 57966104 57966329 -14187553 + L2 LINE L2 2813 3009 -263 2425 86 3 0 chr20 57966329 57966630 -14187252 - AluSx SINE Alu -9 303 2 582 275 65 106 chr20 57966630 57966884 -14186998 + L2 LINE L2 3009 3272 0 192 77 0 0 chr20 57966890 57966916 -14186966 + (TGAA)n Simple_repeat Simple_repeat 4 29 0 832 170 0 34 chr20 57967503 57967650 -14186232 + FLAM_C SINE Alu 1 142 -1 413 219 109 0 chr20 57968981 57969109 -14184773 - MLT1K LTR MaLR -2 586 445 460 287 33 13 chr20 57969205 57969355 -14184527 - MIR SINE MIR -94 168 16 228 263 0 0 chr20 57969465 57969522 -14184360 - MIR SINE MIR -53 209 153 250 328 25 0 chr20 57970016 57970030 -14183852 - L1MA10 LINE L1 0 6334 6321 959 247 212 5 chr20 57970030 57970636 -14183246 - L1ME1 LINE L1 -5 6230 5517 1633 245 93 78 chr20 57970659 57971681 -14182201 - L1ME1 LINE L1 -4996 1400 364 258 264 18 36 chr20 57971760 57971870 -14182012 - L1ME1 LINE L1 -6206 190 83 431 291 30 15 chr20 57972680 57972814 -14181068 + MIR SINE MIR 8 143 -119 250 330 20 10 chr20 57972909 57973009 -14180873 - MER94 DNA DNA -33 101 1 2258 77 0 18 chr20 57973282 57973592 -14180290 - AluSg1 SINE Alu 0 305 1 2352 107 0 3 chr20 57973622 57973930 -14179952 + AluSc SINE Alu 1 307 -2 352 279 80 23 chr20 57973986 57974171 -14179711 + L1MC4a LINE L1 5681 5823 -347 815 322 80 22 chr20 57974206 57974619 -14179263 - L2 LINE L2 -7 3306 2870 1811 167 11 3 chr20 57974754 57975070 -14178812 - AluJb SINE Alu 0 318 1 1076 133 0 0 chr20 57976060 57976211 -14177671 + AluSp/q SINE Alu 154 304 -9 2322 82 0 20 chr20 57976528 57976855 -14177027 - AluSg1 SINE Alu 0 309 1 2179 126 3 3 chr20 57977270 57977572 -14176310 + AluJo SINE Alu 1 302 -10 2024 119 58 7 chr20 57977574 57977869 -14176013 + AluSp SINE Alu 1 310 -3 422 255 21 0 chr20 57977943 57978037 -14175845 + MER2 DNA MER2_type 2 97 -248 2048 105 0 46 chr20 57978038 57978343 -14175539 + AluSq SINE Alu 1 291 -22 463 214 53 30 chr20 57978458 57978589 -14175293 - MIR SINE MIR -55 207 74 616 135 62 0 chr20 57979247 57979343 -14174539 + FRAM SINE Alu 1 101 -75 219 114 0 0 chr20 57979345 57979380 -14174502 + (A)n Simple_repeat Simple_repeat 1 35 0 2436 76 0 16 chr20 57979805 57980109 -14173773 - AluY SINE Alu -12 299 1 263 339 69 23 chr20 57980186 57980316 -14173566 - MIR3 SINE MIR -72 136 1 314 310 179 5 chr20 57980387 57980571 -14173311 + L1ME4a LINE L1 5437 5652 -2156 2141 101 0 27 chr20 57981076 57981372 -14172510 + AluSg SINE Alu 1 288 -22 22 0 0 0 chr20 57982147 57982169 -14171713 + AT_rich Low_complexity Low_complexity 1 22 0 316 217 72 100 chr20 57982446 57982626 -14171256 + L1ME4a LINE L1 5913 6087 -34 2286 71 10 20 chr20 57982808 57983105 -14170777 + AluSq SINE Alu 1 294 -19 775 289 43 25 chr20 57983363 57983598 -14170284 + MIR SINE MIR 12 250 -12 2085 81 92 0 chr20 57983613 57983884 -14169998 + AluSx SINE Alu 1 296 -16 1952 163 0 10 chr20 57984049 57984350 -14169532 + AluJo SINE Alu 1 298 -14 203 254 18 0 chr20 57985299 57985354 -14168528 - MIR SINE MIR -150 112 57 198 191 0 0 chr20 57985827 57985869 -14168013 + (TA)n Simple_repeat Simple_repeat 2 43 0 183 100 0 0 chr20 57987069 57987099 -14166783 + (C)n Simple_repeat Simple_repeat 1 30 0 211 335 48 36 chr20 57987427 57987594 -14166288 + MIR SINE MIR 75 243 -19 1087 0 0 34 chr20 57988260 57988408 -14165474 + (CA)n Simple_repeat Simple_repeat 1 143 0 296 238 119 0 chr20 57989302 57989386 -14164496 - MER5A DNA MER1_type -23 166 73 1303 179 0 9 chr20 57989389 57989612 -14164270 - AluJb SINE Alu -5 307 87 389 192 0 0 chr20 57989613 57989686 -14164196 - MER5A DNA MER1_type -114 75 3 302 311 52 15 chr20 57989732 57989867 -14164015 - MIR SINE MIR -14 248 109 771 212 48 48 chr20 57989924 57990113 -14163769 + MER5A DNA MER1_type 1 189 0 205 169 0 51 chr20 57990131 57990190 -14163692 + C-rich Low_complexity Low_complexity 3 58 0 279 292 42 42 chr20 57990508 57990628 -14163254 - MER5B DNA MER1_type 0 178 59 289 349 71 0 chr20 57991514 57991683 -14162199 - MIR SINE MIR -79 183 3 836 291 112 32 chr20 57998410 57998576 -14155306 + MLT1L LTR MaLR 48 199 -416 291 71 0 0 chr20 57998576 57998618 -14155264 + (CAAAA)n Simple_repeat Simple_repeat 3 44 0 2144 82 0 21 chr20 57998618 57998898 -14154984 - AluSx SINE Alu -38 274 1 836 291 112 32 chr20 57998898 57999229 -14154653 + MLT1L LTR MaLR 198 586 -29 447 269 73 62 chr20 57999238 57999410 -14154472 + L1ME4a LINE L1 5854 6031 -90 2323 108 3 0 chr20 57999410 57999707 -14154175 - AluSq SINE Alu -15 298 1 447 269 73 62 chr20 57999707 57999794 -14154088 + L1ME4a LINE L1 6031 6116 -5 563 231 0 0 chr20 57999946 58000063 -14153819 + MER58 DNA MER1_type 1 117 -2303 1666 158 68 14 chr20 58000067 58000346 -14153536 + AluJo SINE Alu 1 294 -18 1217 177 30 13 chr20 58000350 58000587 -14153295 - L1MD2 LINE L1 -37 6322 6082 625 240 52 72 chr20 58000585 58000835 -14153047 + L1MC5 LINE L1 7103 7347 -614 * 4809 205 77 25 chr20 58000851 58001409 -14152473 + L1M3 LINE L1 3931 4459 -1687 1699 171 17 10 chr20 58001409 58001707 -14152175 + AluJo SINE Alu 1 300 -12 4809 205 77 25 chr20 58001707 58002300 -14151582 + L1M3 LINE L1 4459 5163 -983 2513 95 0 0 chr20 58002300 58002604 -14151278 - AluSx SINE Alu -8 304 1 4809 205 77 25 chr20 58002604 58002783 -14151099 + L1M3 LINE L1 5163 5331 -815 861 130 14 29 chr20 58002783 58002921 -14150961 + AluJo SINE Alu 1 136 -176 1346 126 24 32 chr20 58002921 58003168 -14150714 + L1M3 LINE L1 5319 5563 -608 1917 158 0 13 chr20 58003169 58003467 -14150415 + AluJb SINE Alu 1 294 -18 24 0 0 0 chr20 58003493 58003517 -14150365 + AT_rich Low_complexity Low_complexity 1 24 0 477 130 22 22 chr20 58003517 58003609 -14150273 + L1M3 LINE L1 5546 5637 -697 410 227 64 96 chr20 58003881 58003977 -14149905 + L1MC5 LINE L1 7407 7505 -456 1660 158 83 37 chr20 58003977 58004326 -14149556 - MLT1A1 LTR MaLR 0 365 1 410 227 64 96 chr20 58004326 58004516 -14149366 + L1MC5 LINE L1 7505 7881 -80 1267 154 50 5 chr20 58004523 58004743 -14149139 - AluJo SINE Alu -1 311 82 2649 56 0 0 chr20 58004787 58005091 -14148791 + AluY SINE Alu 1 304 -7 945 228 120 26 chr20 58005095 58005512 -14148370 - MLT1J LTR MaLR -55 456 1 2292 114 7 3 chr20 58006019 58006325 -14147557 - AluSq SINE Alu -6 307 1 243 197 113 0 chr20 58006327 58006398 -14147484 + MER113 DNA MER1_type? 123 201 -320 326 285 81 6 chr20 58006448 58006620 -14147262 + MER113 DNA MER1_type? 334 518 -3 309 350 0 0 chr20 58006622 58006722 -14147160 + MIR SINE MIR 105 204 -58 1266 181 59 13 chr20 58006742 58006980 -14146902 + AluJb SINE Alu 51 299 -13 2145 84 42 36 chr20 58006983 58007291 -14146591 + AluY SINE Alu 1 310 -1 21 0 0 0 chr20 58007479 58007500 -14146382 + AT_rich Low_complexity Low_complexity 1 21 0 453 19 0 0 chr20 58007969 58008023 -14145859 + (TA)n Simple_repeat Simple_repeat 2 55 0 21 0 0 0 chr20 58008907 58008928 -14144954 + AT_rich Low_complexity Low_complexity 1 21 0 242 0 61 0 chr20 58009375 58009408 -14144474 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 2317 89 0 0 chr20 58011137 58011428 -14142454 - AluSg SINE Alu -18 292 2 342 295 98 44 chr20 58011744 58012039 -14141843 + L2 LINE L2 2537 2847 -467 210 262 48 87 chr20 58013077 58013102 -14140780 - MIR SINE MIR -54 208 184 2344 96 0 0 chr20 58013102 58013393 -14140489 - AluSx SINE Alu -21 291 1 210 262 48 87 chr20 58013393 58013493 -14140389 - MIR SINE MIR -78 184 88 889 129 8 0 chr20 58013494 58013626 -14140256 + AluJb SINE Alu 1 133 -179 372 257 9 29 chr20 58013639 58013744 -14140138 - MIR SINE MIR -157 105 3 195 328 82 41 chr20 58013746 58013990 -14139892 - L2 LINE L2 -381 2933 2680 378 310 75 5 chr20 58014242 58014429 -14139453 + MIR SINE MIR 16 215 -47 896 150 0 0 chr20 58015003 58015136 -14138746 + FLAM_C SINE Alu 1 133 -10 189 196 196 0 chr20 58015168 58015224 -14138658 + L2 LINE L2 2999 3065 -248 303 253 189 0 chr20 58015353 58015448 -14138434 + L2 LINE L2 3157 3269 -3 2320 102 0 9 chr20 58015452 58015767 -14138115 + AluSx SINE Alu 1 312 0 21 82 0 0 chr20 58016190 58016239 -14137643 + AT_rich Low_complexity Low_complexity 1 49 0 1960 129 31 3 chr20 58016242 58016529 -14137353 + AluSq SINE Alu 1 295 -18 1322 152 0 28 chr20 58016970 58017181 -14136701 + AluJo SINE Alu 80 284 -28 338 264 33 0 chr20 58017209 58017300 -14136582 - MIR SINE MIR -7 255 162 355 288 39 10 chr20 58017526 58017649 -14136233 - MIR SINE MIR -77 131 4 194 28 0 83 chr20 58018101 58018137 -14135745 + (A)n Simple_repeat Simple_repeat 1 33 0 358 272 190 0 chr20 58018937 58019095 -14134787 - MIR SINE MIR 0 262 75 557 189 9 0 chr20 58020154 58020260 -14133622 + MIR SINE MIR 46 152 -110 875 113 0 0 chr20 58020261 58020394 -14133488 + FLAM_A SINE Alu 1 133 0 311 100 0 0 chr20 58020394 58020453 -14133429 + Alu SINE Alu 2 44 -259 2500 81 0 0 chr20 58021060 58021367 -14132515 - AluY SINE Alu -4 307 1 281 268 202 27 chr20 58021644 58021827 -14132055 + L1MC4 LINE L1 5609 5823 -1985 2347 77 3 39 chr20 58021832 58022144 -14131738 + AluY SINE Alu 1 301 -10 339 319 14 50 chr20 58022211 58022352 -14131530 + L2 LINE L2 3125 3260 -12 342 283 72 109 chr20 58022361 58022404 -14131478 - L2 LINE L2 -16 3297 3254 1896 154 0 13 chr20 58022404 58022702 -14131180 - AluJo SINE Alu -14 298 5 342 283 72 109 chr20 58022702 58022962 -14130920 - L2 LINE L2 -59 3254 3005 1958 156 0 9 chr20 58023055 58023370 -14130512 + AluSx SINE Alu 1 312 0 189 339 0 17 chr20 58023469 58023528 -14130354 + L2 LINE L2 3256 3313 0 1687 210 17 0 chr20 58023631 58023931 -14129951 - AluJo SINE Alu -7 305 1 22 35 0 0 chr20 58023941 58023970 -14129912 + AT_rich Low_complexity Low_complexity 1 29 0 1376 192 83 29 chr20 58023972 58024347 -14129535 + L1MC4 LINE L1 6688 7082 -960 2039 118 42 14 chr20 58024358 58024647 -14129235 + AluSx SINE Alu 3 299 -13 621 105 42 0 chr20 58024670 58024765 -14129117 - HY3 scRNA scRNA -2 99 1 1685 105 43 118 chr20 58025218 58025486 -14128396 - AluJb SINE Alu 0 326 81 7525 49 4 40 chr20 58025486 58027221 -14126661 + SVA Other Other 1 1400 0 1685 105 43 118 chr20 58027221 58027297 -14126585 - AluJb SINE Alu -245 81 1 544 301 0 0 chr20 58027302 58027448 -14126434 + MIR SINE MIR 107 252 -10 2411 92 3 0 chr20 58027934 58028239 -14125643 + AluSx SINE Alu 1 306 -6 799 226 97 18 chr20 58028376 58028593 -14125289 + MIR SINE MIR 29 262 0 1655 199 3 13 chr20 58028725 58029032 -14124850 + AluJo SINE Alu 1 304 -8 388 113 56 0 chr20 58029048 58029119 -14124763 + L1MB4 LINE L1 5258 5332 -848 931 163 0 0 chr20 58029120 58029255 -14124627 + AluSq/x SINE Alu 1 135 -178 2152 122 0 52 chr20 58029255 58029384 -14124498 + AluSx SINE Alu 1 135 -177 2287 120 0 0 chr20 58029384 58029685 -14124197 + AluSq SINE Alu 3 303 -10 2152 122 0 52 chr20 58029685 58029882 -14124000 + AluSx SINE Alu 135 310 -2 4700 152 22 11 chr20 58029882 58030730 -14123152 + L1MB4 LINE L1 5323 6180 0 2052 114 3 46 chr20 58030741 58031048 -14122834 + AluSx SINE Alu 1 294 -18 2097 133 7 7 chr20 58031054 58031362 -14122520 + AluSx SINE Alu 1 308 -4 944 189 113 70 chr20 58031362 58031620 -14122262 + L1ME LINE L1 5327 5601 -563 2299 96 14 0 chr20 58031620 58031947 -14121935 + AluSq SINE Alu 1 313 0 944 189 113 70 chr20 58031947 58031989 -14121893 + L1ME LINE L1 5601 5640 -524 855 196 23 14 chr20 58031991 58032211 -14121671 - Charlie7 DNA MER1_type -1879 733 512 2279 97 0 13 chr20 58032285 58032593 -14121289 - AluSx SINE Alu -8 304 1 196 297 188 0 chr20 58032651 58032715 -14121167 + L2 LINE L2 3234 3309 -4 22 0 0 0 chr20 58032765 58032787 -14121095 + AT_rich Low_complexity Low_complexity 1 22 0 1481 190 59 7 chr20 58033174 58033464 -14120418 - AluJo SINE Alu -7 305 1 730 155 0 0 chr20 58033631 58033747 -14120135 - FLAM_C SINE Alu -15 118 3 2404 80 7 7 chr20 58033806 58034107 -14119775 + AluSx SINE Alu 1 301 -11 745 140 0 0 chr20 58034116 58034230 -14119652 - MER81 DNA DNA 0 114 1 27 0 0 65 chr20 58034304 58034326 -14119556 + AT_rich Low_complexity Low_complexity 1 20 -23 2342 107 0 0 chr20 58034326 58034616 -14119266 + AluSx SINE Alu 1 290 -22 27 0 0 65 chr20 58034616 58034639 -14119243 + AT_rich Low_complexity Low_complexity 20 43 0 488 244 0 24 chr20 58034663 58034786 -14119096 - L2 LINE L2 -4 3309 3190 749 167 8 0 chr20 58034920 58035052 -14118830 + MER3 DNA MER1_type 1 133 -76 2298 103 0 7 chr20 58035055 58035365 -14118517 - AluY SINE Alu -3 308 1 1881 160 27 10 chr20 58035365 58035665 -14118217 - AluJo SINE Alu -6 306 2 1370 158 57 24 chr20 58035670 58035917 -14117965 - AluJo SINE Alu -8 304 50 678 127 0 153 chr20 58035917 58036074 -14117808 - AluJo SINE Alu -178 134 2 1947 153 3 0 chr20 58036109 58036397 -14117485 + AluJb SINE Alu 11 299 -13 1600 138 0 0 chr20 58036397 58036620 -14117262 + AluJb SINE Alu 87 310 -2 573 120 0 0 chr20 58036629 58036721 -14117161 + (GGAA)n Simple_repeat Simple_repeat 1 92 0 2473 61 3 10 chr20 58036728 58037025 -14116857 + AluY SINE Alu 1 295 -16 2124 121 7 0 chr20 58037040 58037329 -14116553 - AluSq SINE Alu -22 291 1 1780 229 50 32 chr20 58037347 58037502 -14116380 + L1 LINE L1 2203 2354 -3792 2265 129 0 0 chr20 58037502 58037804 -14116078 + AluSx SINE Alu 1 302 -10 1780 229 50 32 chr20 58037804 58038202 -14115680 + L1 LINE L1 2354 2766 -3380 851 153 0 0 chr20 58038211 58038335 -14115547 + FLAM_C SINE Alu 1 124 -19 224 119 0 24 chr20 58038342 58038384 -14115498 + (GAAA)n Simple_repeat Simple_repeat 3 43 0 243 254 0 0 chr20 58038393 58038448 -14115434 + L1 LINE L1 2770 2824 -3322 521 197 34 134 chr20 58038455 58038588 -14115294 + L1 LINE L1 2801 2895 -3251 2220 116 0 0 chr20 58038588 58038882 -14115000 + AluSx SINE Alu 1 294 -18 521 197 34 134 chr20 58038882 58039017 -14114865 + L1 LINE L1 2895 3042 -3104 * 528 142 77 118 chr20 58039000 58039169 -14114713 + L1MB3 LINE L1 5943 6104 -79 1826 75 0 0 chr20 58039189 58039417 -14114465 - AluY SINE Alu 0 311 84 1886 141 3 47 chr20 58039419 58039739 -14114143 - AluSq SINE Alu -7 306 1 1308 128 3 157 chr20 58039824 58040197 -14113685 + AluJo SINE Alu 1 302 0 309 228 320 32 chr20 58043135 58043354 -14110528 + L2 LINE L2 2960 3241 -72 2305 119 3 0 chr20 58043843 58044154 -14109728 + AluSx SINE Alu 1 312 0 625 124 0 9 chr20 58044366 58044471 -14109411 - U13 snRNA snRNA 0 104 1 2504 50 3 13 chr20 58044483 58044783 -14109099 - AluY SINE Alu -14 297 1 1905 95 76 0 chr20 58044847 58045109 -14108773 - AluSg SINE Alu -28 282 1 290 323 75 0 chr20 58045199 58045332 -14108550 - MIR SINE MIR -1 261 119 1792 148 32 3 chr20 58046053 58046337 -14107545 + AluJo SINE Alu 1 292 -20 1909 162 0 3 chr20 58046611 58046907 -14106975 + AluJb SINE Alu 1 295 -17 1126 202 123 29 chr20 58047285 58047562 -14106320 + AluJo SINE Alu 1 303 -9 1432 85 0 0 chr20 58047719 58047895 -14105987 - AluY SINE Alu -2 309 134 291 54 0 0 chr20 58047904 58047941 -14105941 + (CA)n Simple_repeat Simple_repeat 2 38 0 225 0 0 0 chr20 58047944 58047969 -14105913 + (TA)n Simple_repeat Simple_repeat 1 25 0 1098 85 0 0 chr20 58047969 58048098 -14105784 - AluY SINE Alu -182 129 1 1590 181 30 10 chr20 58048130 58048433 -14105449 - AluJb SINE Alu -3 309 1 2342 105 0 13 chr20 58048669 58048975 -14104907 + AluSx SINE Alu 1 302 -10 2320 100 3 3 chr20 58049737 58050036 -14103846 - AluSx SINE Alu -13 299 1 862 228 43 83 chr20 58050367 58050718 -14103164 - L1MC4 LINE L1 -19 8023 7687 2175 106 4 0 chr20 58051008 58051283 -14102599 + AluSq SINE Alu 1 276 -37 207 0 0 0 chr20 58051284 58051307 -14102575 + (C)n Simple_repeat Simple_repeat 1 23 0 2740 32 3 0 chr20 58051850 58052160 -14101722 - AluY SINE Alu 0 311 1 2257 108 3 23 chr20 58052500 58052807 -14101075 - AluSx SINE Alu -11 301 1 2270 96 0 0 chr20 58053732 58054013 -14099869 - AluSg SINE Alu -29 281 1 2228 92 17 7 chr20 58054040 58054333 -14099549 + AluSx SINE Alu 1 296 -16 1938 158 3 13 chr20 58054473 58054776 -14099106 + AluJb SINE Alu 6 305 -7 206 294 144 52 chr20 58055567 58055668 -14098214 - MIR SINE MIR -19 243 153 2368 91 7 3 chr20 58055668 58055964 -14097918 + AluSc SINE Alu 1 297 -12 206 294 144 52 chr20 58055964 58056056 -14097826 - MIR SINE MIR -109 153 32 215 292 169 22 chr20 58058296 58058474 -14095408 + MIR SINE MIR 49 252 -10 670 137 46 30 chr20 58058513 58058644 -14095238 - FLAM_C SINE Alu 0 133 1 2150 108 24 0 chr20 58058653 58058950 -14094932 - AluSq SINE Alu -9 304 1 713 277 96 30 chr20 58059220 58059681 -14094201 - L2 LINE L2 -276 3037 2545 1837 138 7 4 chr20 58059695 58059964 -14093918 - AluJb SINE Alu -14 298 29 1774 84 9 0 chr20 58059968 58060195 -14093687 + AluSp SINE Alu 67 295 -18 26 0 0 0 chr20 58060378 58060404 -14093478 + AT_rich Low_complexity Low_complexity 1 26 0 2093 139 3 0 chr20 58060462 58060764 -14093118 + AluSx SINE Alu 1 303 -9 280 286 76 62 chr20 58062191 58062217 -14091665 + L2 LINE L2 2554 2578 -736 2561 54 0 0 chr20 58062217 58062514 -14091368 - AluY SINE Alu -14 297 1 280 286 76 62 chr20 58062514 58062777 -14091105 + L2 LINE L2 2578 2847 -467 1181 115 51 75 chr20 58062867 58062988 -14090894 + MER65A LTR ERV1 40 162 -283 2296 107 7 0 chr20 58062988 58063287 -14090595 - AluSq SINE Alu -12 301 1 1181 115 51 75 chr20 58063287 58063418 -14090464 + MER65A LTR ERV1 162 286 -159 764 150 0 8 chr20 58063418 58063545 -14090337 + AluJo SINE Alu 2 127 -175 1675 170 55 7 chr20 58063562 58063851 -14090031 + AluJb SINE Alu 1 303 -9 1037 161 12 0 chr20 58063946 58064108 -14089774 + AluJo SINE Alu 135 298 -14 793 115 23 0 chr20 58064109 58064239 -14089643 + MER65A LTR ERV1 313 445 0 379 259 25 49 chr20 58064245 58064407 -14089475 + MER65A-int LTR ERV1 11 168 -4703 1994 136 10 29 chr20 58064413 58064723 -14089159 - AluJo SINE Alu -8 304 1 989 206 43 49 chr20 58064724 58064735 -14089147 + MER31-int LTR ERV1 1706 1716 -4960 2438 76 7 3 chr20 58064735 58065038 -14088844 - AluY SINE Alu -7 304 1 989 206 43 49 chr20 58065038 58065119 -14088763 + MER31-int LTR ERV1 1716 1796 -4880 2481 97 0 0 chr20 58065119 58065429 -14088453 + AluSx SINE Alu 1 310 -2 989 206 43 49 chr20 58065429 58065807 -14088075 + MER31-int LTR ERV1 1796 4065 -2611 2583 64 0 3 chr20 58065834 58066145 -14087737 - AluY SINE Alu -1 310 1 1709 131 6 89 chr20 58066151 58066329 -14087553 - AluSx SINE Alu 0 312 173 2112 98 56 0 chr20 58066329 58066614 -14087268 - AluSx SINE Alu -10 302 2 1709 131 6 89 chr20 58066614 58066771 -14087111 - AluSx SINE Alu -139 173 5 514 237 77 25 chr20 58066776 58067038 -14086844 + MER31-int LTR ERV1 2470 3023 -1913 2533 57 0 10 chr20 58067087 58067386 -14086496 - AluY SINE Alu -15 296 1 2243 103 3 7 chr20 58067391 58067691 -14086191 - AluSg SINE Alu -11 299 1 1167 150 44 6 chr20 58067798 58067978 -14085904 + AluJo SINE Alu 1 187 -125 272 95 0 0 chr20 58067983 58068025 -14085857 + MER65A LTR ERV1 404 445 0 2333 89 6 13 chr20 58068071 58068384 -14085498 - AluSp SINE Alu -2 311 1 894 157 30 36 chr20 58068492 58068658 -14085224 - AluJb SINE Alu -14 298 134 463 171 11 0 chr20 58068743 58068831 -14085051 - MER53 DNA DNA -100 89 1 189 171 57 0 chr20 58068849 58068884 -14084998 - L2 LINE L2 -12 3260 3224 252 256 189 0 chr20 58068927 58069017 -14084865 + L2 LINE L2 3158 3264 -8 219 202 21 106 chr20 58069563 58069657 -14084225 - MIR SINE MIR -68 140 55 404 191 279 7 chr20 58069738 58069885 -14083997 + MIR SINE MIR 71 257 -5 311 248 102 44 chr20 58069994 58070131 -14083751 - MER5B DNA MER1_type -1 177 33 2331 87 3 7 chr20 58070187 58070485 -14083397 + AluSc SINE Alu 5 301 -8 1939 130 17 13 chr20 58070629 58070928 -14082954 + AluJb SINE Alu 1 300 -12 881 238 164 57 chr20 58070934 58071522 -14082360 + L1MC4 LINE L1 7181 7711 -97 255 229 0 0 chr20 58071785 58071846 -14082036 + (TATG)n Simple_repeat Simple_repeat 4 64 0 250 305 151 47 chr20 58071847 58071873 -14082009 - L1ME4a LINE L1 -157 5964 5942 2077 93 7 55 chr20 58071873 58072183 -14081699 - AluSx SINE Alu -17 295 1 250 305 151 47 chr20 58072183 58072474 -14081408 - L1ME4a LINE L1 -179 5942 5614 229 210 0 20 chr20 58072521 58072596 -14081286 + GA-rich Low_complexity Low_complexity 2 76 -23 2256 129 0 0 chr20 58072596 58072899 -14080983 + AluSx SINE Alu 1 303 -9 229 210 0 20 chr20 58072899 58072923 -14080959 + GA-rich Low_complexity Low_complexity 76 99 0 397 308 14 7 chr20 58073057 58073203 -14080679 + L1ME LINE L1 5634 5780 -341 386 155 284 20 chr20 58073236 58073384 -14080498 + MER53 DNA DNA 1 187 -2 2157 121 0 0 chr20 58073704 58073985 -14079897 + AluSg SINE Alu 1 281 -29 222 37 0 0 chr20 58073989 58074016 -14079866 + (TAAAA)n Simple_repeat Simple_repeat 2 28 0 230 191 96 85 chr20 58074270 58074364 -14079518 + L2 LINE L2 3141 3235 -37 * 388 224 26 52 chr20 58074363 58074479 -14079403 + MIR SINE MIR 68 180 -82 2133 119 0 32 chr20 58075393 58075703 -14078179 + AluSx SINE Alu 1 300 -12 2140 124 0 3 chr20 58075713 58076012 -14077870 + AluSx SINE Alu 1 298 -14 706 140 0 0 chr20 58076176 58076283 -14077599 + U6 snRNA snRNA 1 107 0 1885 145 3 14 chr20 58076311 58076593 -14077289 - AluJo SINE Alu -33 279 1 2387 97 0 0 chr20 58076667 58076965 -14076917 + AluSx SINE Alu 1 298 -14 300 231 0 0 chr20 58076967 58077019 -14076863 - L1MC4 LINE L1 -1339 6703 6652 298 253 179 11 chr20 58077025 58077120 -14076762 - L2 LINE L2 0 3313 3203 971 189 61 93 chr20 58077120 58077264 -14076618 - MER58D DNA MER1_type -2054 366 219 2004 149 0 28 chr20 58077264 58077585 -14076297 - AluJb SINE Alu 0 312 1 971 189 61 93 chr20 58077585 58077609 -14076273 - MER58D DNA MER1_type -2201 219 196 742 153 0 0 chr20 58077609 58077727 -14076155 - FLAM_C SINE Alu -15 118 1 971 189 61 93 chr20 58077727 58077747 -14076135 - MER58D DNA MER1_type -2224 196 177 1674 179 19 0 chr20 58077747 58078038 -14075844 - AluJb SINE Alu 0 308 13 971 189 61 93 chr20 58078038 58078221 -14075661 - MER58D DNA MER1_type -2243 177 3 407 237 88 31 chr20 58078399 58078627 -14075255 - L2 LINE L2 -337 2977 2737 2259 106 0 16 chr20 58078652 58078955 -14074927 - AluSx SINE Alu -14 298 1 2410 97 7 0 chr20 58078969 58079269 -14074613 - AluSp SINE Alu -11 302 1 2593 54 0 0 chr20 58079350 58079646 -14074236 - AluY SINE Alu -15 296 1 873 113 8 0 chr20 58079698 58079822 -14074060 + FLAM_C SINE Alu 12 136 -7 2205 119 10 0 chr20 58080008 58080310 -14073572 - AluSx SINE Alu -7 305 1 195 103 0 0 chr20 58080497 58080526 -14073356 + L2 LINE L2 3225 3253 -19 599 149 0 50 chr20 58080543 58080664 -14073218 + FLAM_C SINE Alu 23 137 -6 2284 108 3 0 chr20 58081201 58081498 -14072384 + AluSp SINE Alu 1 298 -15 235 208 125 0 chr20 58081517 58081589 -14072293 + L1MC4a LINE L1 5413 5493 -628 1711 145 7 66 chr20 58081592 58081895 -14071987 + AluJb SINE Alu 11 295 -17 1141 130 0 45 chr20 58081903 58082080 -14071802 + FRAM SINE Alu 1 169 -7 255 262 68 10 chr20 58082104 58082207 -14071675 + L1MC4a LINE L1 5513 5621 -500 365 236 32 116 chr20 58082217 58082433 -14071449 + L1MC4a LINE L1 5675 5872 -1936 444 37 0 0 chr20 58082532 58082586 -14071296 + (TA)n Simple_repeat Simple_repeat 1 54 0 1511 164 72 0 chr20 58082591 58082733 -14071149 - AluJo SINE Alu -31 281 151 216 0 0 0 chr20 58082733 58082757 -14071125 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1511 164 72 0 chr20 58082757 58082876 -14071006 - AluJo SINE Alu -161 151 1 202 283 0 0 chr20 58083076 58083129 -14070753 + L2 LINE L2 3010 3062 -251 995 147 27 0 chr20 58083710 58083860 -14070022 + AluJo SINE Alu 1 154 -158 292 198 110 22 chr20 58083877 58083968 -14069914 - L2 LINE L2 -188 3125 3027 725 163 128 0 chr20 58084218 58084359 -14069523 + AluJo SINE Alu 141 299 -3 745 235 59 70 chr20 58084426 58084698 -14069184 - L1ME3A LINE L1 -216 5946 5678 591 209 16 64 chr20 58084714 58084901 -14068981 + MER5B DNA MER1_type 1 178 0 448 260 133 12 chr20 58084999 58085172 -14068710 - L1ME3A LINE L1 -584 5582 5389 328 277 119 32 chr20 58085251 58085504 -14068378 - L2 LINE L2 -357 2957 2683 299 307 36 7 chr20 58085954 58086091 -14067791 + L2 LINE L2 2683 2823 -491 371 302 35 85 chr20 58086191 58086449 -14067433 + L2 LINE L2 3027 3271 -1 311 303 71 32 chr20 58088829 58088984 -14064898 + MIR SINE MIR 90 250 -12 310 123 53 0 chr20 58088998 58089055 -14064827 + MIR SINE MIR 64 123 -139 189 237 0 0 chr20 58090667 58090705 -14063177 + L2 LINE L2 3257 3294 -19 670 168 0 8 chr20 58090716 58090835 -14063047 - FLAM_C SINE Alu -24 119 2 184 182 0 0 chr20 58091522 58091555 -14062327 + MIR SINE MIR 113 145 -63 366 259 56 0 chr20 58091669 58091777 -14062105 - MIR SINE MIR -85 177 64 219 324 28 21 chr20 58094134 58094276 -14059606 + MIR SINE MIR 23 165 -97 349 333 72 14 chr20 58094328 58094607 -14059275 - L2 LINE L2 -50 3263 2969 255 304 59 51 chr20 58094659 58094896 -14058986 - L2 LINE L2 -455 2859 2621 1653 136 72 8 chr20 58094901 58095185 -14058697 + AluSx SINE Alu 1 301 0 675 214 6 25 chr20 58095368 58095503 -14058379 + AluJo SINE Alu 3 136 -176 2481 87 3 3 chr20 58095503 58095815 -14058067 + AluSx SINE Alu 1 312 0 675 214 6 25 chr20 58095815 58095838 -14058044 + AluJo SINE Alu 136 158 -154 237 284 91 68 chr20 58095869 58096133 -14057749 + L1MC4a LINE L1 5797 6066 -1742 1013 214 57 94 chr20 58096167 58096325 -14057557 - L1MC4 LINE L1 -1 8041 7879 2265 112 0 0 chr20 58096325 58096621 -14057261 - AluSx SINE Alu -16 296 1 1013 214 57 94 chr20 58096621 58096887 -14056995 - L1MC4 LINE L1 -163 7879 7633 712 118 0 67 chr20 58096894 58097029 -14056853 - FLAM_C SINE Alu 0 143 18 1375 227 34 113 chr20 58097035 58097050 -14056832 - L1MC4 LINE L1 -249 7640 7625 2585 53 3 3 chr20 58097050 58097352 -14056530 - AluSp SINE Alu -3 310 9 1375 227 34 113 chr20 58097352 58097850 -14056032 - L1MC4 LINE L1 -264 7625 7095 2620 65 0 0 chr20 58097850 58098159 -14055723 - AluY SINE Alu -2 309 1 1375 227 34 113 chr20 58098159 58098230 -14055652 - L1MC4 LINE L1 -794 7095 7020 1813 179 27 0 chr20 58098548 58098849 -14055033 - AluJb SINE Alu -3 309 1 2456 80 0 7 chr20 58099030 58099331 -14054551 + AluSg SINE Alu 1 299 -11 2345 91 10 16 chr20 58099367 58099674 -14054208 - AluSx SINE Alu -6 306 2 270 195 201 76 chr20 58099740 58100018 -14053864 + L2 LINE L2 2815 3057 -256 2501 80 7 0 chr20 58100018 58100319 -14053563 - AluSp SINE Alu -10 303 1 270 195 201 76 chr20 58100319 58100423 -14053459 + L2 LINE L2 3057 3311 -2 2171 121 0 13 chr20 58100468 58100774 -14053108 - AluSx SINE Alu -9 303 2 2207 110 10 10 chr20 58100775 58101076 -14052806 - AluSx SINE Alu -11 301 1 791 252 129 29 chr20 58101146 58101319 -14052563 - MLT1B LTR MaLR 0 390 236 2037 100 82 0 chr20 58101319 58101600 -14052282 - AluSx SINE Alu -6 306 3 791 252 129 29 chr20 58101600 58101775 -14052107 - MLT1B LTR MaLR -154 236 7 382 212 0 0 chr20 58101883 58101949 -14051933 - FRAM SINE Alu -25 141 76 198 306 24 0 chr20 58101976 58102061 -14051821 - L2 LINE L2 -198 3074 2988 213 302 151 6 chr20 58102191 58102363 -14051519 - L2 LINE L2 -494 2820 2624 191 217 65 0 chr20 58102575 58102621 -14051261 - MIR SINE MIR -54 208 160 556 283 78 0 chr20 58102655 58102821 -14051061 + MIR SINE MIR 28 206 -56 2445 93 6 0 chr20 58102823 58103134 -14050748 + AluSp SINE Alu 1 313 0 2021 139 0 57 chr20 58103972 58104303 -14049579 - AluJb SINE Alu 0 312 1 1293 129 0 0 chr20 58104369 58104540 -14049342 - AluSg/x SINE Alu -13 299 129 2219 134 0 0 chr20 58104543 58104850 -14049032 - AluSg SINE Alu -3 307 1 1988 143 40 0 chr20 58105227 58105527 -14048355 - AluSx SINE Alu 0 312 1 700 167 0 0 chr20 58105723 58105837 -14048045 + FLAM_C SINE Alu 14 127 -16 198 330 11 45 chr20 58106215 58106303 -14047579 - MIR SINE MIR -118 144 60 1689 94 0 0 chr20 58106305 58106517 -14047365 - AluSp SINE Alu 0 313 102 2250 102 16 0 chr20 58106518 58106826 -14047056 + AluSp SINE Alu 1 309 -4 988 69 0 0 chr20 58106822 58106938 -14046944 - AluSp SINE Alu -197 116 1 2088 117 0 29 chr20 58106948 58107255 -14046627 - AluSg SINE Alu -12 298 1 2156 167 34 73 chr20 58107266 58107800 -14046082 - L1MB7 LINE L1 -1 6183 5671 2007 131 0 0 chr20 58107864 58108173 -14045709 - AluSx SINE Alu 0 309 1 1975 154 0 3 chr20 58108184 58108490 -14045392 - AluJo SINE Alu -7 305 1 2239 91 0 0 chr20 58108979 58109266 -14044616 + AluSg SINE Alu 1 287 -23 372 184 46 46 chr20 58109387 58109496 -14044386 - MIR SINE MIR -105 157 49 636 254 168 28 chr20 58109528 58109962 -14043920 - L2 LINE L2 -160 3112 2615 2246 102 3 0 chr20 58110161 58110464 -14043418 - AluSx SINE Alu -8 304 1 1907 135 62 0 chr20 58110467 58110755 -14043127 - AluSx SINE Alu -5 307 2 414 0 0 0 chr20 58110832 58110878 -14043004 + (TCTA)n Simple_repeat Simple_repeat 4 49 0 1688 156 41 24 chr20 58110878 58111173 -14042709 - AluJo SINE Alu -12 300 1 306 282 77 0 chr20 58111386 58111503 -14042379 - L1ME3A LINE L1 -48 6122 5997 1671 169 15 0 chr20 58111503 58111776 -14042106 - AluJo SINE Alu -2 310 34 1122 145 0 0 chr20 58111798 58111970 -14041912 - FRAM SINE Alu -4 172 1 277 294 49 74 chr20 58112180 58112393 -14041489 + MIR SINE MIR 35 257 -5 250 281 0 0 chr20 58112389 58112453 -14041429 + L2 LINE L2 2910 2973 -340 * 540 132 0 0 chr20 58112569 58112645 -14041237 + AluJ/FLAM SINE Alu 1 76 -236 2222 114 0 0 chr20 58112654 58112961 -14040921 + AluSx SINE Alu 1 307 -5 2352 80 0 0 chr20 58112962 58113262 -14040620 + AluSg SINE Alu 1 300 -10 936 158 27 33 chr20 58113262 58113434 -14040448 + AluSc SINE Alu 132 307 -2 575 318 58 12 chr20 58113451 58113530 -14040352 + L2 LINE L2 3040 3114 -199 183 42 0 0 chr20 58113530 58113554 -14040328 + (CCCCG)n Simple_repeat Simple_repeat 1 24 0 575 318 58 12 chr20 58113554 58113716 -14040166 + L2 LINE L2 3114 3292 -21 203 103 26 0 chr20 58114171 58114210 -14039672 + (CGG)n Simple_repeat Simple_repeat 1 40 0 248 188 62 0 chr20 58114727 58114775 -14039107 + MIR3 SINE MIR 108 158 -50 1989 154 0 0 chr20 58114902 58115199 -14038683 + AluJo SINE Alu 1 297 -15 2253 96 3 3 chr20 58115199 58115500 -14038382 + AluSx SINE Alu 1 301 -11 2119 122 7 0 chr20 58115500 58115796 -14038086 + AluSg SINE Alu 1 298 -12 282 56 0 0 chr20 58115805 58115841 -14038041 + (GGGAA)n Simple_repeat Simple_repeat 5 40 0 2104 125 0 6 chr20 58115996 58116309 -14037573 - AluSx SINE Alu -1 311 1 722 300 120 29 chr20 58116374 58116724 -14037158 + L2 LINE L2 2932 3313 0 339 200 248 8 chr20 58117177 58117302 -14036580 + MIR SINE MIR 1 155 -107 189 0 0 0 chr20 58117393 58117414 -14036468 + (TG)n Simple_repeat Simple_repeat 2 22 0 * 207 0 0 0 chr20 58117413 58117436 -14036446 + (TA)n Simple_repeat Simple_repeat 1 23 0 2147 98 28 0 chr20 58117436 58117721 -14036161 - AluSg SINE Alu -17 293 1 1645 156 83 3 chr20 58117832 58118121 -14035761 - AluJb SINE Alu 0 312 1 661 253 73 13 chr20 58118121 58118354 -14035528 - Charlie4 DNA MER1_type -1689 272 26 276 294 19 6 chr20 58118772 58118932 -14034950 + (TG)n Simple_repeat Simple_repeat 2 163 0 257 208 0 0 chr20 58119587 58119640 -14034242 + C-rich Low_complexity Low_complexity 1 53 0 633 181 39 52 chr20 58119747 58119902 -14033980 + MIR SINE MIR 13 165 -97 336 252 122 0 chr20 58120041 58120156 -14033726 - MIR SINE MIR -121 141 13 230 292 22 11 chr20 58120384 58120473 -14033409 + MIR SINE MIR 34 123 -139 180 344 205 7 chr20 58120629 58120780 -14033102 + MIR SINE MIR 73 253 -9 198 71 0 0 chr20 58120788 58120816 -14033066 + (TC)n Simple_repeat Simple_repeat 1 28 0 1160 162 0 0 chr20 58120816 58120995 -14032887 - AluJb SINE Alu -1 311 133 2103 135 0 0 chr20 58120995 58121307 -14032575 - AluSx SINE Alu 0 312 1 501 257 41 6 chr20 58121467 58121638 -14032244 + MLT1K LTR MaLR 237 413 -175 466 243 129 14 chr20 58121679 58121819 -14032063 - MIR SINE MIR -103 159 4 463 219 24 6 chr20 58122023 58122192 -14031690 + CT-rich Low_complexity Low_complexity 2 173 0 2153 116 0 3 chr20 58122381 58122682 -14031200 + AluSq SINE Alu 1 300 -13 193 289 82 21 chr20 58122739 58122836 -14031046 - L2 LINE L2 -3097 217 115 1550 132 0 5 chr20 58122847 58123067 -14030815 + AluSq SINE Alu 1 219 -94 811 118 0 8 chr20 58123067 58123178 -14030704 + AluSp/q SINE Alu 187 298 -15 573 183 10 0 chr20 58123178 58123282 -14030600 - MIR SINE MIR -139 123 19 218 209 194 0 chr20 58123305 58123372 -14030510 + L2 LINE L2 3221 3300 -13 198 103 0 0 chr20 58123372 58123401 -14030481 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 719 119 0 0 chr20 58123467 58123568 -14030314 - AluJ/FLAM SINE Alu -211 101 1 231 325 133 8 chr20 58123606 58123726 -14030156 + MIR SINE MIR 113 247 -15 215 242 121 0 chr20 58123865 58123931 -14029951 - MIR SINE MIR -19 243 170 260 180 40 0 chr20 58123946 58123996 -14029886 + L2 LINE L2 3221 3272 0 181 296 0 0 chr20 58124354 58124398 -14029484 + MIR SINE MIR 87 130 -78 189 265 20 0 chr20 58124541 58124590 -14029292 + MIR SINE MIR 82 131 -77 2253 113 3 0 chr20 58124726 58125035 -14028847 - AluSx SINE Alu -2 310 1 198 0 0 0 chr20 58125850 58125872 -14028010 + (TTCA)n Simple_repeat Simple_repeat 3 24 0 1126 67 0 0 chr20 58125934 58126069 -14027813 + AluSq/x SINE Alu 1 135 -177 1944 132 3 49 chr20 58126069 58126204 -14027678 + AluSx SINE Alu 1 141 -171 2192 28 0 0 chr20 58126204 58126457 -14027425 + AluY SINE Alu 59 311 0 1944 132 3 49 chr20 58126457 58126669 -14027213 + AluSx SINE Alu 141 312 0 1633 169 0 58 chr20 58126678 58126986 -14026896 + AluJb SINE Alu 7 296 -16 418 143 0 0 chr20 58127013 58127090 -14026792 - MER53 DNA DNA -18 171 95 216 319 165 0 chr20 58127135 58127226 -14026656 - MIR SINE MIR -50 212 107 213 154 0 0 chr20 58127734 58127773 -14026109 + (TTCA)n Simple_repeat Simple_repeat 4 42 0 650 290 100 28 chr20 58127788 58128078 -14025804 - L2 LINE L2 -9 3304 2994 2188 112 3 0 chr20 58128080 58128376 -14025506 + AluSg SINE Alu 1 297 -13 323 278 78 0 chr20 58128474 58128589 -14025293 + L2 LINE L2 2977 3100 -213 889 223 80 0 chr20 58128924 58129148 -14024734 - L1MB5 LINE L1 -38 6136 5895 926 136 36 77 chr20 58129187 58129297 -14024585 - L1MB5 LINE L1 -382 5792 5694 2002 106 0 59 chr20 58129297 58129617 -14024265 - AluSx SINE Alu -11 301 1 926 136 36 77 chr20 58129617 58129727 -14024155 - L1MB5 LINE L1 -480 5694 5581 741 160 8 25 chr20 58129750 58129869 -14024013 - FLAM_C SINE Alu -15 118 2 392 335 57 0 chr20 58129873 58130031 -14023851 - MIR SINE MIR -36 226 60 459 263 39 19 chr20 58130198 58130346 -14023536 + MIR SINE MIR 40 193 -69 2206 111 3 3 chr20 58130346 58130652 -14023230 + AluSx SINE Alu 1 306 -6 579 268 12 24 chr20 58131221 58131389 -14022493 - MIR SINE MIR -83 179 14 238 226 0 0 chr20 58131823 58131876 -14022006 + MIR SINE MIR 96 148 -114 468 268 128 17 chr20 58132320 58132342 -14021540 + L2 LINE L2 2847 2865 -448 447 19 0 0 chr20 58132342 58132394 -14021488 + (CA)n Simple_repeat Simple_repeat 2 53 0 468 268 128 17 chr20 58132394 58132550 -14021332 + L2 LINE L2 2865 3045 -268 1653 140 0 8 chr20 58132551 58132808 -14021074 - AluJb SINE Alu -51 261 7 2252 65 0 49 chr20 58132824 58133131 -14020751 - AluY SINE Alu -18 293 2 843 288 100 22 chr20 58133195 58133752 -14020130 - L2 LINE L2 0 3313 2715 314 264 14 0 chr20 58134634 58134706 -14019176 - L2 LINE L2 -1 3312 3240 455 75 0 60 chr20 58134706 58134804 -14019078 - Alu SINE Alu 0 314 221 2392 88 0 0 chr20 58135013 58135318 -14018564 - AluSx SINE Alu -7 305 1 673 192 72 42 chr20 58135319 58135512 -14018370 - L2 LINE L2 -280 3033 2835 207 279 23 12 chr20 58135625 58135711 -14018171 + (TG)n Simple_repeat Simple_repeat 1 87 0 206 263 47 18 chr20 58135778 58135949 -14017933 + (TG)n Simple_repeat Simple_repeat 1 176 0 2027 117 0 23 chr20 58136754 58137054 -14016828 + AluSx SINE Alu 1 293 -19 310 252 38 69 chr20 58137317 58137352 -14016530 - MIR SINE MIR -49 159 124 1985 149 0 16 chr20 58137352 58137660 -14016222 + AluJo SINE Alu 1 303 -9 310 252 38 69 chr20 58137660 58137755 -14016127 - MIR SINE MIR -84 124 33 1743 158 17 10 chr20 58138168 58138459 -14015423 - AluJo SINE Alu -19 293 1 867 137 0 0 chr20 58138486 58138617 -14015265 - FLAM_C SINE Alu 0 133 3 188 232 36 0 chr20 58138758 58138814 -14015068 + MIR SINE MIR 75 132 -130 2410 73 0 0 chr20 58139367 58139668 -14014214 + AluY SINE Alu 1 301 -10 388 261 33 0 chr20 58139800 58139892 -14013990 + L2 LINE L2 3206 3300 -13 1521 156 46 36 chr20 58139893 58140195 -14013687 + AluJo SINE Alu 1 305 -7 1595 113 0 0 chr20 58140203 58140416 -14013466 + AluSq SINE Alu 1 213 -100 858 131 35 7 chr20 58140511 58140656 -14013226 - MIR SINE MIR -86 176 28 392 308 98 0 chr20 58140661 58140804 -14013078 + L2 LINE L2 3153 3309 -4 378 278 28 0 chr20 58140814 58140922 -14012960 + MIR SINE MIR 81 191 -71 430 263 43 69 chr20 58140933 58141122 -14012760 + MIR SINE MIR 8 186 -22 201 338 88 0 chr20 58141464 58141544 -14012338 - MIR SINE MIR -92 170 84 803 258 100 46 chr20 58141782 58142193 -14011689 + L2 LINE L2 2841 3273 -40 882 153 0 0 chr20 58142380 58142511 -14011371 - FLAM_C SINE Alu 0 133 3 195 333 40 13 chr20 58142530 58142605 -14011277 + MIR SINE MIR 112 188 -74 180 243 0 0 chr20 58143116 58143190 -14010692 + (GGGTG)n Simple_repeat Simple_repeat 3 76 0 308 270 71 56 chr20 58143219 58143345 -14010537 + MIR SINE MIR 22 149 -113 1839 148 7 3 chr20 58143496 58143793 -14010089 + AluJo SINE Alu 1 298 -14 421 256 186 53 chr20 58143800 58144101 -14009781 - L2 LINE L2 -21 3292 2952 419 247 68 62 chr20 58144640 58144786 -14009096 + MIR SINE MIR 20 166 -96 409 278 162 4 chr20 58145139 58145380 -14008502 + L2 LINE L2 2530 2808 -506 400 328 40 35 chr20 58145496 58145697 -14008185 + L2 LINE L2 3111 3312 -1 300 238 218 0 chr20 58145701 58145802 -14008080 - MIR SINE MIR -79 183 61 192 40 0 0 chr20 58145807 58145832 -14008050 + (ATG)n Simple_repeat Simple_repeat 2 26 0 325 272 37 0 chr20 58145837 58145918 -14007964 - L2 LINE L2 -11 3302 3219 1493 142 4 73 chr20 58145920 58146055 -14007827 + AluSx SINE Alu 1 113 -199 1940 102 29 4 chr20 58146055 58146355 -14007527 + AluSp SINE Alu 1 307 0 1493 142 4 73 chr20 58146355 58146478 -14007404 + AluSx SINE Alu 113 243 -69 512 271 8 0 chr20 58146503 58146632 -14007250 - MIR SINE MIR -34 228 99 205 220 60 0 chr20 58147007 58147057 -14006825 + MIR SINE MIR 70 122 -86 2451 73 0 0 chr20 58147515 58147817 -14006065 - AluY SINE Alu -9 302 1 320 256 12 0 chr20 58148006 58148088 -14005794 - MIR SINE MIR -117 145 63 301 215 15 0 chr20 58148557 58148622 -14005260 + MIR SINE MIR 87 152 -56 479 273 93 34 chr20 58148829 58149034 -14004848 + MIR SINE MIR 20 236 -26 237 315 19 25 chr20 58149247 58149409 -14004473 + L2 LINE L2 2819 2979 -293 2283 104 0 0 chr20 58149427 58149736 -14004146 - AluSg SINE Alu -1 309 1 372 313 75 0 chr20 58149820 58149954 -14003928 - L1MDa LINE L1 -3917 2623 2480 207 139 0 0 chr20 58149957 58149993 -14003889 + (TGAA)n Simple_repeat Simple_repeat 1 36 0 518 309 74 25 chr20 58150216 58150459 -14003423 + MIR SINE MIR 8 262 0 893 169 0 0 chr20 58150706 58150848 -14003034 + FLAM_C SINE Alu 1 142 -1 180 302 63 0 chr20 58150853 58150916 -14002966 - MIR SINE MIR -79 183 117 280 258 142 33 chr20 58150925 58151045 -14002837 - L2 LINE L2 -2 3270 3138 234 348 68 28 chr20 58151250 58151500 -14002382 + L2 LINE L2 2932 3191 -81 2071 114 0 35 chr20 58151655 58151970 -14001912 - AluSq SINE Alu -9 304 1 867 145 0 0 chr20 58151995 58152119 -14001763 - FLAM_C SINE Alu -19 124 1 583 273 22 0 chr20 58152130 58152269 -14001613 + L2 LINE L2 3171 3312 -1 316 289 26 0 chr20 58152270 58152346 -14001536 + polypurine Low_complexity Low_complexity 2 79 0 332 305 119 0 chr20 58152372 58152490 -14001392 - L2 LINE L2 0 3313 3182 594 271 77 0 chr20 58153106 58153287 -14000595 + MIR SINE MIR 59 253 -9 1732 167 64 0 chr20 58153343 58153625 -14000257 - AluJo SINE Alu -12 300 1 215 285 181 49 chr20 58153722 58153866 -14000016 + L2 LINE L2 3109 3271 -1 521 247 7 55 chr20 58154128 58154147 -13999735 - L2 LINE L2 -7 3306 3288 1844 133 3 36 chr20 58154147 58154448 -13999434 + AluSx SINE Alu 9 299 -13 521 247 7 55 chr20 58154448 58154574 -13999308 - L2 LINE L2 -25 3288 3168 401 278 40 0 chr20 58155137 58155263 -13998619 + MIR SINE MIR 27 157 -105 1961 123 3 35 chr20 58155273 58155583 -13998299 + AluSx SINE Alu 1 300 -12 2222 78 3 0 chr20 58155590 58155907 -13997975 + AluSg SINE Alu 1 318 0 411 57 0 0 chr20 58155969 58156022 -13997860 - MER1B DNA MER1_type 0 339 287 1123 170 0 0 chr20 58156064 58156252 -13997630 - MER1B DNA MER1_type -107 190 3 210 278 0 0 chr20 58156302 58156356 -13997526 + (TTA)n Simple_repeat Simple_repeat 1 54 0 1929 138 0 28 chr20 58156356 58156676 -13997206 + AluJo SINE Alu 1 311 -1 369 43 0 0 chr20 58156680 58156727 -13997155 + (TAG)n Simple_repeat Simple_repeat 1 47 0 425 266 128 5 chr20 58157691 58157851 -13996031 + MIR SINE MIR 13 191 -34 790 269 79 0 chr20 58158670 58158886 -13994996 - MIR SINE MIR -16 246 14 1906 141 26 20 chr20 58159728 58160033 -13993849 - AluJb SINE Alu -5 307 1 389 341 87 41 chr20 58160214 58160280 -13993602 - L1MC4a LINE L1 -1844 5964 5902 2172 119 27 0 chr20 58160280 58160573 -13993309 + AluSx SINE Alu 3 303 -9 389 341 87 41 chr20 58160573 58160922 -13992960 - L1MC4a LINE L1 -1906 5902 5530 327 163 0 38 chr20 58161029 58161109 -13992773 - L1ME4a LINE L1 -1 6120 6044 403 272 36 14 chr20 58161142 58161326 -13992556 + MIR SINE MIR 8 192 -69 224 271 51 0 chr20 58161954 58162013 -13991869 - L2 LINE L2 0 3272 3211 2355 108 0 13 chr20 58162083 58162399 -13991483 - AluSx SINE Alu 0 312 1 180 0 0 0 chr20 58162422 58162442 -13991440 + (T)n Simple_repeat Simple_repeat 1 20 0 1836 160 17 7 chr20 58162494 58162788 -13991094 + AluJo SINE Alu 1 297 -15 192 323 8 39 chr20 58162846 58162973 -13990909 - L2 LINE L2 -174 3098 2976 262 265 112 31 chr20 58163153 58163251 -13990631 + L2 LINE L2 3142 3247 -25 956 224 59 91 chr20 58163263 58163432 -13990450 + MLT1C LTR MaLR 15 188 -279 2372 116 0 0 chr20 58163432 58163742 -13990140 + AluSx SINE Alu 1 310 -2 956 224 59 91 chr20 58163742 58163979 -13989903 + MLT1C LTR MaLR 188 408 -59 2021 37 114 11 chr20 58163995 58164267 -13989615 - AluY SINE Alu -11 300 1 1565 113 0 9 chr20 58164267 58164488 -13989394 - AluJb SINE Alu -7 305 87 252 130 0 0 chr20 58164556 58164602 -13989280 + (TGAA)n Simple_repeat Simple_repeat 1 46 0 661 141 0 0 chr20 58164702 58164801 -13989081 - AluJo SINE Alu -130 182 84 235 275 122 23 chr20 58165290 58165421 -13988461 + MIR SINE MIR 98 241 -21 581 241 62 0 chr20 58165932 58166094 -13987788 + MIR SINE MIR 13 184 -78 872 133 0 0 chr20 58166171 58166299 -13987583 - FLAM_C SINE Alu -3 130 3 268 302 10 10 chr20 58166460 58166556 -13987326 - MIR SINE MIR -162 100 5 999 133 0 48 chr20 58166632 58166798 -13987084 - FRAM SINE Alu -4 162 5 500 200 153 26 chr20 58166807 58166997 -13986885 - MER20 DNA MER1_type 0 219 6 23 0 0 0 chr20 58167127 58167150 -13986732 + AT_rich Low_complexity Low_complexity 1 23 0 2190 113 20 0 chr20 58167165 58167458 -13986424 + AluSx SINE Alu 3 301 -11 205 118 0 0 chr20 58167711 58167745 -13986137 - MIR SINE MIR -119 143 110 1914 139 7 0 chr20 58167948 58168222 -13985660 + AluJb SINE Alu 1 276 -36 2291 92 0 0 chr20 58168225 58168508 -13985374 - AluSx SINE Alu -18 294 12 1054 75 0 0 chr20 58168508 58168642 -13985240 + AluY SINE Alu 173 306 -5 320 281 42 0 chr20 58168943 58169039 -13984843 - MIR SINE MIR -150 112 13 249 128 0 0 chr20 58169081 58169128 -13984754 + (CA)n Simple_repeat Simple_repeat 2 48 0 253 308 49 21 chr20 58169854 58169972 -13983910 + MIR SINE MIR 116 240 -22 2513 89 0 0 chr20 58169972 58170275 -13983607 - AluSx SINE Alu -9 303 1 253 308 49 21 chr20 58170275 58170299 -13983583 + MIR SINE MIR 240 262 0 372 286 129 0 chr20 58170372 58170519 -13983363 + MIR SINE MIR 47 212 -50 352 242 78 16 chr20 58170602 58170730 -13983152 + MIR3 SINE MIR 2 137 -71 225 214 129 0 chr20 58170857 58170927 -13982955 + MER91A DNA MER1_type 93 171 -25 715 125 0 0 chr20 58171315 58171419 -13982463 - FLAM_C SINE Alu -38 105 2 1439 236 45 73 chr20 58171421 58172179 -13981703 + L2 LINE L2 2546 3306 -7 219 232 0 0 chr20 58172919 58172975 -13980907 + (TCCA)n Simple_repeat Simple_repeat 3 58 0 2378 90 0 0 chr20 58173016 58173304 -13980578 - AluSx SINE Alu -24 288 1 578 266 210 15 chr20 58173338 58173672 -13980210 + L2 LINE L2 2915 3313 0 2279 112 3 0 chr20 58173934 58174238 -13979644 + AluSx SINE Alu 1 305 -7 839 152 0 0 chr20 58174238 58174370 -13979512 + FLAM_C SINE Alu 1 132 -1 300 248 59 10 chr20 58174373 58174474 -13979408 + Charlie8 DNA MER1_type 74 179 -2238 191 213 187 27 chr20 58174571 58174646 -13979236 + MIR3 SINE MIR 68 154 -54 898 117 0 0 chr20 58174646 58174774 -13979108 + AluJo/FLAM SINE Alu 1 128 -174 1299 68 6 0 chr20 58174774 58174936 -13978946 - AluY SINE Alu -18 293 131 23 0 0 0 chr20 58174936 58174959 -13978923 + AT_rich Low_complexity Low_complexity 1 23 0 1576 141 21 95 chr20 58174962 58175289 -13978593 + AluJo SINE Alu 10 312 0 226 291 194 24 chr20 58175667 58175832 -13978050 - MIR SINE MIR 0 262 70 524 301 6 31 chr20 58175935 58176098 -13977784 - L2 LINE L2 0 3313 3155 228 149 0 0 chr20 58176249 58176296 -13977586 + (TA)n Simple_repeat Simple_repeat 1 47 0 2154 131 0 0 chr20 58176297 58176588 -13977294 - AluJb SINE Alu -16 296 6 2357 98 0 3 chr20 58176605 58176911 -13976971 - AluSx SINE Alu -4 308 4 1592 96 0 0 chr20 58176945 58177142 -13976740 + AluSg/x SINE Alu 96 292 -18 2160 127 7 0 chr20 58177869 58178176 -13975706 - AluSx SINE Alu -3 309 1 2236 122 0 3 chr20 58178185 58178522 -13975360 - AluSq SINE Alu 0 313 1 2220 106 7 0 chr20 58178535 58178819 -13975063 - AluSx SINE Alu -26 286 1 1996 104 7 4 chr20 58178939 58179209 -13974673 + AluSx SINE Alu 40 310 -2 2282 128 0 0 chr20 58179211 58179589 -13974293 + AluSx SINE Alu 1 378 0 2299 115 0 0 chr20 58180026 58180322 -13973560 - AluSx SINE Alu -16 296 1 1994 159 7 0 chr20 58180324 58180633 -13973249 - AluSx SINE Alu -1 311 1 322 235 39 20 chr20 58180640 58180742 -13973140 + Charlie8 DNA MER1_type 79 182 -2235 2467 90 3 0 chr20 58181079 58181380 -13972502 - AluSp SINE Alu -11 302 1 2369 83 3 0 chr20 58181569 58181859 -13972023 + AluSp SINE Alu 1 291 -22 2049 117 52 3 chr20 58182304 58182594 -13971288 + AluSx SINE Alu 1 304 -8 2573 63 0 0 chr20 58182990 58183293 -13970589 - AluY SINE Alu -8 303 1 1819 152 10 17 chr20 58183294 58183446 -13970436 - AluJb SINE Alu -18 294 143 2117 66 100 0 chr20 58183446 58183717 -13970165 - AluY SINE Alu -13 298 1 1819 152 10 17 chr20 58183717 58183860 -13970022 - AluJb SINE Alu -169 143 1 2152 103 11 7 chr20 58184427 58184728 -13969154 + AluSq SINE Alu 1 302 0 1440 170 85 25 chr20 58184745 58185109 -13968773 + MER58D DNA MER1_type 1 386 0 22 0 0 0 chr20 58185212 58185234 -13968648 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr20 58185411 58185433 -13968449 + AT_rich Low_complexity Low_complexity 1 22 0 998 277 44 9 chr20 58187494 58187812 -13966070 - MER113 DNA MER1_type? -48 473 145 279 235 243 7 chr20 58187882 58188018 -13965864 + MIR SINE MIR 83 250 -12 2400 77 24 0 chr20 58188962 58189260 -13964622 - AluSp SINE Alu -8 305 1 293 321 156 22 chr20 58189799 58190294 -13963588 + L2 LINE L2 2317 2877 -437 2474 85 0 0 chr20 58190866 58191173 -13962709 + AluY SINE Alu 1 307 -4 1955 158 7 0 chr20 58191184 58191481 -13962401 + AluSx SINE Alu 1 299 -13 270 316 209 8 chr20 58191662 58191896 -13961986 + L1MC4a LINE L1 5512 5792 -2016 2019 151 56 19 chr20 58192151 58192563 -13961319 + L1MC3 LINE L1 7358 7784 -1 2064 141 7 7 chr20 58192574 58192872 -13961010 + AluJo SINE Alu 1 298 -14 266 240 192 0 chr20 58193095 58193241 -13960641 - LTR50 LTR ERVL -5 790 617 973 268 192 11 chr20 58193313 58193683 -13960199 - LTR50 LTR ERVL -330 465 29 248 312 80 0 chr20 58194125 58194263 -13959619 + LTR33A LTR ERVL 324 472 -51 907 102 131 11 chr20 58194272 58194448 -13959434 + L1MA9 LINE L1 5639 5835 -477 809 80 0 0 chr20 58194451 58194551 -13959331 + AluSg/x SINE Alu 188 287 -23 2569 152 50 0 chr20 58194551 58195026 -13958856 + L1MA9 LINE L1 5814 6312 0 2149 122 3 3 chr20 58195126 58195414 -13958468 - AluSx SINE Alu -22 290 3 2019 99 75 7 chr20 58195481 58195763 -13958119 - AluSq SINE Alu -12 301 1 325 265 68 26 chr20 58195773 58195890 -13957992 + L1MC4a LINE L1 5811 5932 -1876 2163 134 0 3 chr20 58196109 58196408 -13957474 + AluSx SINE Alu 1 298 -14 584 218 49 76 chr20 58196437 58196662 -13957220 + MER20 DNA MER1_type 1 219 0 580 296 157 3 chr20 58197073 58197360 -13956522 - L1MC4a LINE L1 -1892 5916 5586 1208 136 11 7 chr20 58197560 58197780 -13956102 + L1M4 LINE L1 5458 5674 -502 2533 72 3 0 chr20 58197780 58198086 -13955796 + AluSg1 SINE Alu 1 307 -2 300 240 21 52 chr20 58198090 58198186 -13955696 + L1MCa LINE L1 1979 2071 -4355 23 0 0 0 chr20 58198186 58198209 -13955673 + AT_rich Low_complexity Low_complexity 1 23 0 305 239 37 55 chr20 58198209 58198318 -13955564 - L1MCa LINE L1 -4328 2098 1992 36 40 0 0 chr20 58198332 58198382 -13955500 + AT_rich Low_complexity Low_complexity 1 50 0 2364 180 66 29 chr20 58198387 58198957 -13954925 + L1MB7 LINE L1 5588 6175 -9 276 143 20 0 chr20 58199122 58199171 -13954711 - L1MB5 LINE L1 -43 6131 6082 577 201 152 12 chr20 58199934 58200098 -13953784 + MIR SINE MIR 1 187 -75 1085 265 204 13 chr20 58201966 58202713 -13951169 - L2 LINE L2 0 3313 2417 441 224 94 40 chr20 58202755 58202978 -13950904 - MER113 DNA MER1_type? -286 235 1 463 132 0 0 chr20 58203280 58203348 -13950534 + MLT1B LTR MaLR 6 73 -317 * 716 145 53 23 chr20 58203334 58203465 -13950417 + MLT1B LTR MaLR 256 390 0 298 244 11 33 chr20 58203504 58203594 -13950288 + L1ME4a LINE L1 5978 6065 -56 300 312 9 9 chr20 58203656 58203765 -13950117 + L2 LINE L2 2911 3019 -294 1876 169 16 3 chr20 58203890 58204198 -13949684 + AluJb SINE Alu 1 312 0 1234 136 0 17 chr20 58204199 58204376 -13949506 + AluJb SINE Alu 131 304 -8 2288 108 3 0 chr20 58204380 58204668 -13949214 + AluSg SINE Alu 5 293 -17 365 186 14 0 chr20 58205417 58205487 -13948395 - Charlie1 DNA MER1_type 0 2761 2691 853 122 0 0 chr20 58205487 58205602 -13948280 - AluSp/q SINE Alu -11 302 188 225 0 0 0 chr20 58205642 58205667 -13948215 + (A)n Simple_repeat Simple_repeat 1 25 0 1256 79 7 0 chr20 58206610 58206762 -13947120 - AluSp SINE Alu -160 153 1 260 359 108 12 chr20 58206765 58207024 -13946858 + L2 LINE L2 2693 2976 -338 684 242 31 53 chr20 58207074 58207301 -13946581 + L2 LINE L2 3092 3313 0 2000 145 0 0 chr20 58207494 58207776 -13946106 - AluSx SINE Alu -30 282 1 244 301 59 39 chr20 58207909 58208062 -13945820 + L2 LINE L2 3158 3313 0 2517 77 0 0 chr20 58208072 58208369 -13945513 + AluSc SINE Alu 1 297 -12 2505 53 7 3 chr20 58208446 58208748 -13945134 + AluY SINE Alu 1 303 -8 2145 113 0 0 chr20 58208805 58209097 -13944785 - AluSx SINE Alu -20 292 1 1688 123 90 0 chr20 58209737 58210043 -13943839 + AluSg SINE Alu 1 330 0 2160 86 6 26 chr20 58210619 58210967 -13942915 + AluSp SINE Alu 1 313 0 583 203 166 6 chr20 58211243 58211406 -13942476 + MER5A DNA MER1_type 1 189 0 481 308 181 16 chr20 58211787 58212410 -13941472 - L2 LINE L2 -7 3306 2474 346 263 274 0 chr20 58212551 58212726 -13941156 + MIR SINE MIR 16 238 -24 217 349 62 20 chr20 58212854 58213000 -13940882 + L3 LINE CR1 1413 1564 -13 2294 87 3 0 chr20 58213539 58213839 -13940043 + AluSg SINE Alu 1 301 -9 282 157 0 0 chr20 58214737 58214788 -13939094 - L2 LINE L2 0 3313 3263 569 279 250 3 chr20 58214875 58215215 -13938667 + L2 LINE L2 2885 3308 -5 26 0 0 0 chr20 58217147 58217173 -13936709 + GC_rich Low_complexity Low_complexity 1 26 0 223 250 45 68 chr20 58217600 58217688 -13936194 - MIR SINE MIR -130 132 47 384 22 0 0 chr20 58217837 58217882 -13936000 + (TTCA)n Simple_repeat Simple_repeat 1 45 0 539 187 218 47 chr20 58217886 58218162 -13935720 - L2 LINE L2 -12 3301 2931 352 239 34 0 chr20 58218234 58218322 -13935560 - MIR SINE MIR -67 141 51 181 295 283 8 chr20 58218351 58218595 -13935287 + L2 LINE L2 2479 2789 -525 361 258 57 0 chr20 58218599 58218723 -13935159 + MER94 DNA DNA 3 133 -1 397 203 94 102 chr20 58218769 58218854 -13935028 - MER96 DNA MER1_type? -44 131 46 2251 94 0 0 chr20 58218854 58219152 -13934730 + AluSx SINE Alu 1 298 -14 397 203 94 102 chr20 58219152 58219194 -13934688 - MER96 DNA MER1_type? -129 46 5 205 281 40 46 chr20 58219222 58219376 -13934506 + L2 LINE L2 2870 3073 -199 463 288 59 13 chr20 58219555 58219708 -13934174 + MIR SINE MIR 31 190 -72 331 182 47 60 chr20 58219768 58219877 -13934005 - MIR SINE MIR -48 214 104 297 293 88 27 chr20 58220191 58220338 -13933544 + MIR SINE MIR 107 262 0 * 494 281 23 47 chr20 58220308 58220479 -13933403 - MIR SINE MIR -48 214 48 2049 119 7 0 chr20 58220761 58221063 -13932819 + AluSx SINE Alu 1 304 -8 323 319 66 24 chr20 58221108 58221274 -13932608 + MLT1L LTR MaLR 443 615 0 1863 112 48 0 chr20 58221631 58221934 -13931948 + AluSx SINE Alu 1 316 0 1083 188 35 4 chr20 58222328 58222563 -13931319 - MIR SINE MIR 0 262 19 354 223 10 10 chr20 58222655 58222681 -13931201 + HsTC2 DNA Tc2 3 28 -1870 2163 77 43 20 chr20 58222681 58222981 -13930901 - AluSg SINE Alu -3 307 1 354 223 10 10 chr20 58222981 58223056 -13930826 + HsTC2 DNA Tc2 27 1895 -3 512 262 163 0 chr20 58223056 58223228 -13930654 + L1MC4a LINE L1 5408 5607 -2201 1650 149 10 27 chr20 58223230 58223526 -13930356 + AluJo SINE Alu 12 302 -10 462 224 54 27 chr20 58223539 58223686 -13930196 + L1MC4a LINE L1 5782 5932 -1876 989 225 119 0 chr20 58223820 58224047 -13929835 - MER58B DNA MER1_type -1 340 87 1846 146 4 0 chr20 58224064 58224369 -13929513 + AluJo SINE Alu 11 316 0 204 143 0 0 chr20 58224538 58224580 -13929302 + (TA)n Simple_repeat Simple_repeat 2 43 0 1806 163 0 13 chr20 58224623 58224923 -13928959 + AluJb SINE Alu 1 296 -16 710 245 73 17 chr20 58225402 58225635 -13928247 + MIR SINE MIR 17 262 0 330 269 32 0 chr20 58225758 58225851 -13928031 + MIR SINE MIR 28 123 -139 834 251 86 13 chr20 58226003 58226370 -13927512 + MLT1K LTR MaLR 112 561 -27 1374 101 0 0 chr20 58226491 58226670 -13927212 + AluSq SINE Alu 1 179 -134 208 305 158 0 chr20 58226780 58226862 -13927020 + L2 LINE L2 3218 3312 -1 1275 182 66 36 chr20 58226890 58227192 -13926690 + AluJo SINE Alu 1 311 -1 1032 286 118 21 chr20 58227218 58227333 -13926549 + L2 LINE L2 2793 2895 -418 2022 116 7 3 chr20 58227333 58227636 -13926246 - AluSq SINE Alu -9 304 1 1032 286 118 21 chr20 58227636 58227988 -13925894 + L2 LINE L2 2895 3308 -5 211 103 0 0 chr20 58229491 58229520 -13924362 - MIR SINE MIR -18 244 216 262 170 0 0 chr20 58229533 58229580 -13924302 + L2 LINE L2 3014 3060 -212 512 30 15 0 chr20 58229615 58229681 -13924201 + (TCTA)n Simple_repeat Simple_repeat 4 70 0 2148 82 4 0 chr20 58229681 58229961 -13923921 - AluSc SINE Alu -28 281 1 716 163 24 24 chr20 58229971 58230094 -13923788 - FLAM_C SINE Alu -19 124 2 407 268 115 32 chr20 58230248 58230438 -13923444 - MIR SINE MIR -21 241 40 219 338 149 36 chr20 58230570 58230792 -13923090 - MIR SINE MIR 0 262 16 1041 261 97 54 chr20 58231022 58231411 -13922471 + L2 LINE L2 2812 3226 -87 2202 85 20 13 chr20 58231411 58231716 -13922166 - AluSx SINE Alu -5 307 1 1041 261 97 54 chr20 58231716 58231790 -13922092 + L2 LINE L2 3226 3295 -18 459 187 28 56 chr20 58231805 58231912 -13921970 + L2 LINE L2 3191 3294 -19 288 338 56 14 chr20 58232484 58232626 -13921256 + MIR SINE MIR 3 150 -112 868 246 40 5 chr20 58232637 58232861 -13921021 - LTR16A1 LTR ERVL -12 445 214 351 212 61 0 chr20 58232932 58233031 -13920851 - LTR16A1 LTR ERVL -352 105 1 272 200 0 33 chr20 58233112 58233172 -13920710 - MIR SINE MIR -55 153 96 783 235 26 77 chr20 58233264 58233536 -13920346 - MER102b DNA MER1_type -30 311 54 1163 253 95 46 chr20 58234113 58234616 -13919266 + MLT1K LTR MaLR 61 588 0 239 318 24 12 chr20 58234799 58234884 -13918998 - MIR SINE MIR -97 165 80 201 243 0 0 chr20 58235070 58235107 -13918775 + (CTCA)n Simple_repeat Simple_repeat 3 39 0 2248 100 0 3 chr20 58235409 58235709 -13918173 + AluSx SINE Alu 1 299 -13 462 196 52 0 chr20 58235893 58235990 -13917892 + MIR SINE MIR 49 150 -112 2162 110 3 0 chr20 58235992 58236293 -13917589 + AluSx SINE Alu 1 302 -10 349 294 73 0 chr20 58236296 58236432 -13917450 - MIR SINE MIR 0 262 117 730 247 183 18 chr20 58236447 58236836 -13917046 + L2 LINE L2 2842 3294 -19 197 156 0 67 chr20 58236819 58236864 -13917018 + MIR SINE MIR 202 243 -19 * 190 186 0 47 chr20 58236837 58236880 -13917002 + L2 LINE L2 3262 3302 -11 * 228 391 33 20 chr20 58237860 58238011 -13915871 - MIR SINE MIR -90 172 20 226 227 151 59 chr20 58238165 58238284 -13915598 + MIR3 SINE MIR 59 188 -20 1913 106 0 4 chr20 58238362 58238627 -13915255 + AluSq SINE Alu 29 292 -21 311 300 45 0 chr20 58238805 58238915 -13914967 - L1ME3 LINE L1 -2 6160 6046 522 202 207 81 chr20 58238937 58238971 -13914911 - MER58A DNA MER1_type -2197 223 195 2061 114 0 7 chr20 58238971 58239268 -13914614 + AluSx SINE Alu 1 295 -17 522 202 207 81 chr20 58239268 58239431 -13914451 - MER58A DNA MER1_type -2225 195 1 2394 85 3 0 chr20 58239447 58239753 -13914129 + AluSp SINE Alu 1 307 -6 1047 288 28 18 chr20 58239754 58240150 -13913732 - L1ME2 LINE L1 -120 6044 5645 278 210 25 12 chr20 58240172 58240253 -13913629 - MIR SINE MIR 0 262 181 2926 168 53 69 chr20 58240430 58240512 -13913370 + L1MC3 LINE L1 7120 7202 -583 2116 122 3 0 chr20 58240512 58240816 -13913066 + AluSx SINE Alu 1 305 -7 1677 168 21 0 chr20 58240825 58241110 -13912772 + AluJb SINE Alu 1 291 -21 2926 168 53 69 chr20 58241110 58241135 -13912747 + L1MC3 LINE L1 7210 7234 -551 1249 167 130 40 chr20 58241135 58241411 -13912471 - AluJb SINE Alu -1 301 1 2926 168 53 69 chr20 58241411 58241661 -13912221 + L1MC3 LINE L1 7234 7487 -298 2240 90 7 0 chr20 58241661 58241961 -13911921 + AluSc SINE Alu 1 302 -7 2926 168 53 69 chr20 58241961 58242268 -13911614 + L1MC3 LINE L1 7487 7785 0 203 211 42 42 chr20 58243242 58243313 -13910569 + L2 LINE L2 2932 3002 -311 434 279 59 63 chr20 58243397 58243684 -13910198 + L2 LINE L2 1861 2146 -1168 1384 128 0 5 chr20 58243742 58243953 -13909929 - AluSg/x SINE Alu -4 308 99 330 93 0 0 chr20 58243953 58243996 -13909886 - Alu SINE Alu -257 43 1 1157 289 106 2 chr20 58243997 58244735 -13909147 + L2 LINE L2 2229 3060 -253 253 258 264 28 chr20 58245263 58245445 -13908437 + MIR SINE MIR 36 260 -2 564 235 92 20 chr20 58245519 58245715 -13908167 - MIR SINE MIR -38 224 15 314 216 99 36 chr20 58246116 58246227 -13907655 + MIR SINE MIR 27 144 -64 1207 286 107 32 chr20 58246303 58246522 -13907360 - L2 LINE L2 0 3313 3112 1950 97 0 47 chr20 58246522 58246822 -13907060 - AluSx SINE Alu -26 286 1 1207 286 107 32 chr20 58246822 58247440 -13906442 - L2 LINE L2 -201 3112 2396 2340 85 0 3 chr20 58247762 58248067 -13905815 - AluSg SINE Alu -6 304 1 202 211 77 0 chr20 58248267 58248319 -13905563 - MIR SINE MIR -135 73 18 229 250 92 0 chr20 58248566 58248642 -13905240 - Charlie8 DNA MER1_type -2258 159 77 516 289 64 25 chr20 58248663 58248867 -13905015 + L1MC4a LINE L1 5687 5898 -1910 25 31 0 0 chr20 58248956 58248988 -13904894 + AT_rich Low_complexity Low_complexity 1 32 0 2170 119 3 0 chr20 58248991 58249302 -13904580 + AluSx SINE Alu 1 312 0 832 159 0 0 chr20 58249323 58249461 -13904421 + FLAM_C SINE Alu 6 143 0 2182 113 13 0 chr20 58249483 58249792 -13904090 + AluSq SINE Alu 1 313 0 386 250 52 22 chr20 58249946 58250082 -13903800 - MIR SINE MIR -122 140 1 191 353 190 19 chr20 58250241 58250510 -13903372 + L2 LINE L2 2915 3229 -43 251 262 47 28 chr20 58250575 58250682 -13903200 - MIR SINE MIR -81 181 73 268 314 57 21 chr20 58250792 58250932 -13902950 - MIR3 SINE MIR -60 148 4 198 268 51 0 chr20 58251547 58251622 -13902260 - MIR SINE MIR -63 145 111 1861 73 9 126 chr20 58251843 58252160 -13901722 + AluSg SINE Alu 1 280 -30 256 338 123 0 chr20 58252184 58252338 -13901544 - MIR SINE MIR -5 257 85 225 305 76 8 chr20 58252352 58252470 -13901412 - MIR3 SINE MIR -1 207 82 1689 184 3 19 chr20 58252899 58253214 -13900668 + AluJo SINE Alu 1 310 -2 203 229 153 76 chr20 58254191 58254322 -13899560 + MIR SINE MIR 121 261 -1 925 289 45 38 chr20 58254414 58254758 -13899124 + L2 LINE L2 2867 3216 -97 2225 97 0 10 chr20 58254758 58255066 -13898816 - AluSx SINE Alu -7 305 1 925 289 45 38 chr20 58255066 58255143 -13898739 + L2 LINE L2 3216 3291 -22 248 155 17 52 chr20 58255171 58255229 -13898653 - MIR SINE MIR -87 121 66 214 277 0 89 chr20 58255536 58255637 -13898245 - MIR SINE MIR -97 165 74 2234 68 0 0 chr20 58255649 58255967 -13897915 + AluY SINE Alu 2 319 0 242 266 64 32 chr20 58256062 58256156 -13897726 - MIR SINE MIR -133 129 33 34 42 0 0 chr20 58257803 58257851 -13896031 + GC_rich Low_complexity Low_complexity 1 48 0 212 320 27 0 chr20 58258441 58258516 -13895366 - MIR SINE MIR -13 249 173 489 309 157 4 chr20 58258523 58258772 -13895110 + L2 LINE L2 3026 3312 -1 2591 23 0 0 chr20 58258887 58259186 -13894696 + AluY SINE Alu 1 299 -12 1911 117 50 0 chr20 58259195 58259478 -13894404 + AluSq SINE Alu 1 297 -16 25 31 0 0 chr20 58259867 58259899 -13893983 + GC_rich Low_complexity Low_complexity 1 32 0 201 229 313 0 chr20 58260081 58260164 -13893718 - L2 LINE L2 0 3313 3205 285 293 0 0 chr20 58260178 58260253 -13893629 - L2 LINE L2 -257 3056 2982 * 297 164 0 75 chr20 58260244 58260311 -13893571 - L2 LINE L2 -542 2772 2711 2855 3 0 0 chr20 58260311 58260625 -13893257 - AluYb8 SINE Alu -4 314 1 2311 72 0 0 chr20 58260628 58260918 -13892964 - AluSc SINE Alu -16 293 4 2070 130 0 10 chr20 58260920 58261227 -13892655 - AluJb SINE Alu -8 304 1 1864 122 10 81 chr20 58261238 58261254 -13892628 - L1MB7 LINE L1 -16 6168 6152 2205 89 10 0 chr20 58261254 58261546 -13892336 - AluSg SINE Alu -11 299 5 1864 122 10 81 chr20 58261546 58261913 -13891969 - L1MB7 LINE L1 -32 6152 5812 1258 115 0 0 chr20 58261919 58262093 -13891789 - AluSx SINE Alu -138 174 1 267 98 0 0 chr20 58262095 58262136 -13891746 - L1MB7 LINE L1 -809 5365 5325 1025 158 0 6 chr20 58262136 58262307 -13891575 + AluSp SINE Alu 134 303 -10 580 221 18 0 chr20 58262307 58262470 -13891412 - L1MB7 LINE L1 -808 5338 5173 892 168 0 0 chr20 58262477 58262620 -13891262 - FRAM SINE Alu -14 162 20 2048 123 7 3 chr20 58262653 58262955 -13890927 - AluSx SINE Alu -9 303 1 1799 145 14 7 chr20 58262977 58263267 -13890615 - AluJo SINE Alu -20 292 1 1160 105 28 6 chr20 58263270 58263451 -13890431 - L1MC1 LINE L1 -132 6201 6017 2064 82 31 10 chr20 58264040 58264331 -13889551 + AluSc SINE Alu 1 297 -12 297 221 95 35 chr20 58264360 58264502 -13889380 + MLT1L LTR MaLR 108 273 -315 277 297 52 16 chr20 58264539 58264684 -13889198 + MLT1K LTR MaLR 375 502 -86 814 215 55 15 chr20 58264686 58264886 -13888996 + MIR SINE MIR 40 247 -15 2082 113 0 0 chr20 58264886 58265188 -13888694 - AluSx SINE Alu 0 305 4 2146 91 3 3 chr20 58265300 58265609 -13888273 - AluSp SINE Alu 0 309 1 289 164 98 0 chr20 58265750 58265811 -13888071 - MIR SINE MIR -105 157 91 2282 91 0 3 chr20 58265813 58266121 -13887761 - AluY SINE Alu -4 307 1 2169 93 3 19 chr20 58266165 58266476 -13887406 + AluSx SINE Alu 2 307 -5 1045 210 182 67 chr20 58266720 58266791 -13887091 - MLT1J LTR MaLR 0 511 450 338 0 0 23 chr20 58266791 58266834 -13887048 + (CA)n Simple_repeat Simple_repeat 2 43 0 1045 210 182 67 chr20 58266834 58267196 -13886686 - MLT1J LTR MaLR -61 450 28 216 289 0 0 chr20 58267417 58267469 -13886413 - MIR SINE MIR 0 262 211 1434 73 5 10 chr20 58267470 58267662 -13886220 - AluSp SINE Alu -122 191 1 987 196 68 65 chr20 58268540 58268810 -13885072 - L1MC4 LINE L1 -17 8025 7752 2127 101 9 22 chr20 58268810 58269127 -13884755 - AluSq SINE Alu 0 313 1 987 196 68 65 chr20 58269127 58269177 -13884705 - L1MC4 LINE L1 -290 7752 7704 2243 108 0 0 chr20 58269365 58269672 -13884210 + AluSx SINE Alu 1 307 -5 1274 136 36 41 chr20 58269707 58269927 -13883955 + MER20 DNA MER1_type 1 219 0 233 116 0 23 chr20 58270432 58270475 -13883407 + (TTCTC)n Simple_repeat Simple_repeat 5 46 0 1614 140 52 88 chr20 58270477 58270777 -13883105 - L1MB3 LINE L1 -328 5855 5546 2048 113 3 0 chr20 58270777 58271097 -13882785 - AluSq SINE Alu 0 321 1 1614 140 52 88 chr20 58271097 58271163 -13882719 - L1MB3 LINE L1 -637 5546 5499 2016 112 0 3 chr20 58271163 58271469 -13882413 - AluSx SINE Alu 0 305 1 1521 189 19 30 chr20 58271469 58271777 -13882105 - L1MB3 LINE L1 -1676 4470 4165 2455 53 0 3 chr20 58271777 58272080 -13881802 - AluY SINE Alu -9 302 1 1521 189 19 30 chr20 58272080 58272142 -13881740 - L1MB3 LINE L1 -1981 4165 4104 1923 119 35 0 chr20 58272152 58272437 -13881445 - AluJb SINE Alu -17 295 1 412 278 46 52 chr20 58272437 58272631 -13881251 + MLT1J LTR MaLR 284 476 -35 1674 181 0 10 chr20 58272809 58273102 -13880780 - AluJb SINE Alu -22 290 1 824 165 30 0 chr20 58273104 58273237 -13880645 - FLAM_C SINE Alu -5 138 2 330 298 19 10 chr20 58273242 58273346 -13880536 + MIR SINE MIR 35 139 -123 237 295 71 23 chr20 58273378 58273542 -13880340 + L1MB4 LINE L1 5599 5783 -338 427 250 47 87 chr20 58273774 58273882 -13880000 + MIR SINE MIR 41 141 -121 2318 90 0 0 chr20 58273882 58274183 -13879699 + AluSg SINE Alu 1 301 -9 427 250 47 87 chr20 58274183 58274246 -13879636 + MIR SINE MIR 141 205 -57 522 277 84 55 chr20 58274298 58274414 -13879468 - L2 LINE L2 -54 3259 3148 1577 158 12 73 chr20 58274414 58274742 -13879140 - AluSx SINE Alu -4 308 1 522 277 84 55 chr20 58274742 58274863 -13879019 - L2 LINE L2 -165 3148 3015 314 271 106 0 chr20 58275129 58275214 -13878668 + MIR SINE MIR 81 174 -88 1604 182 89 39 chr20 58275219 58275331 -13878551 + MLT1B LTR MaLR 1 106 -284 2031 132 0 0 chr20 58275331 58275627 -13878255 + AluSx SINE Alu 1 296 -16 1604 182 89 39 chr20 58275627 58275872 -13878010 + MLT1B LTR MaLR 106 376 -14 548 259 98 26 chr20 58276179 58276445 -13877437 - LTR33A LTR ERVL 0 523 239 273 313 124 21 chr20 58276594 58276827 -13877055 + LTR33A LTR ERVL 263 519 -4 1328 191 97 29 chr20 58276991 58277240 -13876642 + L1MB4 LINE L1 5817 6097 -83 1970 124 0 16 chr20 58277240 58277546 -13876336 - AluJo SINE Alu -6 306 6 1328 191 97 29 chr20 58277546 58277637 -13876245 + L1MB4 LINE L1 6097 6180 0 492 117 117 117 chr20 58277640 58277677 -13876205 + MER65A LTR ERV1 1 37 -408 2243 70 40 3 chr20 58277677 58277976 -13875906 - AluY SINE Alu -1 310 1 492 117 117 117 chr20 58277976 58278083 -13875799 + MER65A LTR ERV1 36 145 -300 2113 121 0 10 chr20 58278084 58278398 -13875484 + AluSx SINE Alu 1 311 -1 2169 96 10 0 chr20 58278398 58278688 -13875194 + AluSp SINE Alu 1 294 -19 1181 148 45 5 chr20 58278690 58278892 -13874990 - AluJo SINE Alu -20 292 83 2091 104 0 0 chr20 58278941 58279250 -13874632 - AluSg SINE Alu 0 309 1 1077 171 0 0 chr20 58279266 58279447 -13874435 - FRAM SINE Alu 0 176 1 252 59 0 0 chr20 58279502 58279536 -13874346 + (TG)n Simple_repeat Simple_repeat 1 34 0 250 162 263 0 chr20 58279559 58279658 -13874224 + L1MC4 LINE L1 7918 8042 0 2235 106 0 0 chr20 58279680 58279982 -13873900 + AluSx SINE Alu 2 303 -9 1769 153 37 10 chr20 58280890 58281184 -13872698 + AluJb SINE Alu 1 302 -10 735 216 26 7 chr20 58281184 58281337 -13872545 + AluJb SINE Alu 134 289 -23 233 184 0 20 chr20 58281376 58281425 -13872457 - L1ME LINE L1 -452 5669 5622 1973 136 26 0 chr20 58281466 58281768 -13872114 - AluSx SINE Alu -2 310 1 251 308 28 19 chr20 58281886 58281925 -13871957 - L1ME2 LINE L1 -15 6149 6112 2028 131 3 0 chr20 58281925 58282231 -13871651 - AluSx SINE Alu -5 307 1 251 308 28 19 chr20 58282231 58282298 -13871584 - L1ME2 LINE L1 -52 6112 6042 1353 199 127 47 chr20 58282302 58282729 -13871153 + MLT1C LTR MaLR 6 466 -1 613 272 82 0 chr20 58282739 58282934 -13870948 - L1ME2 LINE L1 -125 6039 5829 2261 58 0 76 chr20 58283014 58283343 -13870539 - AluSp SINE Alu -9 304 1 185 108 27 0 chr20 58283523 58283560 -13870322 + (GGGTG)n Simple_repeat Simple_repeat 4 41 0 1821 158 3 10 chr20 58283946 58284249 -13869633 - AluJb SINE Alu -11 301 1 2147 100 0 17 chr20 58284264 58284565 -13869317 - AluSx SINE Alu -16 296 1 216 0 0 0 chr20 58284661 58284685 -13869197 + (A)n Simple_repeat Simple_repeat 1 24 0 451 181 32 0 chr20 58284911 58285005 -13868877 + MLT1G LTR MaLR 452 548 -42 1852 134 3 65 chr20 58285019 58285340 -13868542 + AluSx SINE Alu 1 301 -11 488 198 0 0 chr20 58285343 58285429 -13868453 + L1M2 LINE L1 5610 5695 -605 403 219 7 0 chr20 58285426 58285511 -13868371 + L1M2 LINE L1 5642 5732 -570 * 911 173 68 0 chr20 58285620 58285782 -13868100 + FAM SINE Alu 1 173 -2 25 65 0 0 chr20 58285952 58285998 -13867884 + AT_rich Low_complexity Low_complexity 1 46 0 483 123 0 37 chr20 58286002 58286069 -13867813 - AluJ SINE Alu -112 200 135 2169 101 0 26 chr20 58286069 58286376 -13867506 - AluSg SINE Alu -11 299 1 483 123 0 37 chr20 58286376 58286389 -13867493 - AluJ SINE Alu -177 135 123 793 208 0 0 chr20 58286389 58286543 -13867339 - MER3 DNA MER1_type -55 154 1 2880 60 8 13 chr20 58286763 58287145 -13866737 - L1PA4 LINE L1 -1 6154 5775 887 131 0 36 chr20 58287366 58287391 -13866491 - AluJ SINE Alu -170 132 108 2379 34 51 0 chr20 58287391 58287686 -13866196 + AluYa5 SINE Alu 1 310 -1 887 131 0 36 chr20 58287686 58287797 -13866085 - AluJ SINE Alu -194 108 1 2738 130 40 9 chr20 58287808 58288253 -13865629 - L1MB3 LINE L1 0 6183 5725 1279 103 0 0 chr20 58288253 58288427 -13865455 - AluSg/x SINE Alu -7 305 132 1968 147 111 74 chr20 58288427 58288691 -13865191 - L1MB3 LINE L1 -446 5737 5484 1143 98 18 0 chr20 58288691 58288855 -13865027 - L1MA5 LINE L1 0 6300 6134 1722 120 0 0 chr20 58288862 58289104 -13864778 - AluSx SINE Alu -16 296 55 1968 147 111 74 chr20 58289104 58289356 -13864526 - L1MB3 LINE L1 -704 5479 5190 2037 126 0 20 chr20 58289358 58289660 -13864222 - AluSx SINE Alu -16 296 1 591 181 111 47 chr20 58289686 58289857 -13864025 + L2 LINE L2 2889 3070 -243 1159 173 53 0 chr20 58289871 58290079 -13863803 + AluJb SINE Alu 85 303 -9 465 301 84 30 chr20 58290117 58290320 -13863562 + L2 LINE L2 3099 3312 -1 285 221 58 29 chr20 58290552 58290656 -13863226 - MIR3 SINE MIR -1 207 101 206 290 7 131 chr20 58290650 58290795 -13863087 + MIR SINE MIR 9 135 -127 * 197 198 36 0 chr20 58290884 58290937 -13862945 - MIR SINE MIR -58 150 108 716 215 30 60 chr20 58291313 58291513 -13862369 - Charlie8 DNA MER1_type -2219 198 5 202 292 92 0 chr20 58291950 58292015 -13861867 + MIR SINE MIR 75 145 -63 386 224 0 13 chr20 58292095 58292171 -13861711 + MIR SINE MIR 84 158 -104 780 169 0 22 chr20 58292175 58292311 -13861571 + AluJo SINE Alu 2 134 -178 240 253 12 12 chr20 58292312 58292395 -13861487 + MIR SINE MIR 134 216 -46 193 250 0 0 chr20 58292519 58292559 -13861323 - MIR SINE MIR -88 120 81 584 307 110 26 chr20 58292596 58292905 -13860977 - L2 LINE L2 -1 3271 2937 258 220 102 0 chr20 58294038 58294097 -13859785 - MIR SINE MIR -83 125 61 24 91 0 0 chr20 58294660 58294726 -13859156 + GC_rich Low_complexity Low_complexity 1 66 0 21 36 0 0 chr20 58294815 58294843 -13859039 + GC_rich Low_complexity Low_complexity 1 28 0 219 191 24 0 chr20 58294984 58295026 -13858856 + (CAG)n Simple_repeat Simple_repeat 1 43 0 42 36 0 0 chr20 58295232 58295288 -13858594 + GC_rich Low_complexity Low_complexity 1 56 0 21 36 0 0 chr20 58295349 58295377 -13858505 + GC_rich Low_complexity Low_complexity 1 28 0 27 0 0 0 chr20 58295404 58295431 -13858451 + GC_rich Low_complexity Low_complexity 1 27 0 180 77 0 0 chr20 58295587 58295613 -13858269 + (CCG)n Simple_repeat Simple_repeat 2 27 0 24 0 0 0 chr20 58295670 58295694 -13858188 + GC_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr20 58295850 58295872 -13858010 + GC_rich Low_complexity Low_complexity 1 22 0 23 54 0 0 chr20 58296141 58296178 -13857704 + GC_rich Low_complexity Low_complexity 1 37 0 201 94 0 0 chr20 58296193 58296225 -13857657 + (CCCCCG)n Simple_repeat Simple_repeat 1 32 0 33 25 0 0 chr20 58296281 58296321 -13857561 + AT_rich Low_complexity Low_complexity 1 40 0 189 0 0 0 chr20 58296590 58296611 -13857271 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 244 218 26 77 chr20 58297655 58297733 -13856149 + MIR SINE MIR 189 262 0 258 325 17 26 chr20 58297793 58297910 -13855972 - MIR SINE MIR -21 241 126 269 326 23 16 chr20 58299646 58299775 -13854107 - MIR SINE MIR -74 188 59 1733 135 34 24 chr20 58299831 58300128 -13853754 + AluSx SINE Alu 1 300 -12 427 241 11 0 chr20 58300215 58300302 -13853580 - L2 LINE L2 -1 3271 3184 414 309 116 17 chr20 58300499 58300572 -13853310 - MIR SINE MIR -14 248 184 2075 126 7 0 chr20 58300572 58300874 -13853008 - AluSx SINE Alu -8 304 1 414 309 116 17 chr20 58300874 58300981 -13852901 - MIR SINE MIR -78 184 50 286 242 121 68 chr20 58301312 58301444 -13852438 - MIR3 SINE MIR -65 143 5 240 336 0 7 chr20 58301479 58301589 -13852293 + MIR SINE MIR 33 139 -69 361 237 57 34 chr20 58301750 58301927 -13851955 - L2 LINE L2 -262 3010 2830 759 194 40 14 chr20 58302931 58303115 -13850767 + MIR SINE MIR 71 262 0 458 320 33 33 chr20 58303139 58303190 -13850692 + MIR SINE MIR 16 66 -196 2150 110 10 0 chr20 58303190 58303491 -13850391 - AluSg SINE Alu -6 304 1 458 320 33 33 chr20 58303491 58303620 -13850262 + MIR SINE MIR 65 196 -66 1174 249 58 111 chr20 58303698 58304211 -13849671 + MLT1J LTR MaLR 26 511 0 1569 242 68 38 chr20 58305251 58305715 -13848167 - L1ME3A LINE L1 -8 6162 5679 2052 118 10 3 chr20 58305715 58306021 -13847861 - AluSx SINE Alu -3 309 2 1569 242 68 38 chr20 58306021 58306085 -13847797 - L1ME3A LINE L1 -491 5679 5618 2008 261 104 26 chr20 58306203 58306436 -13847446 - L1MC4 LINE L1 -136 7906 7693 2102 118 3 10 chr20 58306436 58306749 -13847133 - AluJo SINE Alu -1 311 1 2008 261 104 26 chr20 58306749 58308083 -13845799 - L1MC4 LINE L1 -349 7693 5896 180 0 0 0 chr20 58308083 58308103 -13845779 + (CA)n Simple_repeat Simple_repeat 2 21 0 2008 261 104 26 chr20 58308103 58308400 -13845482 - L1MC4 LINE L1 -2146 5896 5624 277 347 17 26 chr20 58308390 58308590 -13845292 - L1MC/D LINE L1 -297 5824 5670 * 654 324 138 3 chr20 58308604 58308974 -13844908 - LTR16A LTR ERVL -28 422 3 360 308 28 9 chr20 58309228 58309335 -13844547 + MIR SINE MIR 37 145 -63 565 209 123 61 chr20 58309413 58309511 -13844371 + L1MC4 LINE L1 7363 7453 -332 1889 82 22 19 chr20 58309511 58309780 -13844102 + AluSc SINE Alu 33 302 -7 565 209 123 61 chr20 58309780 58309907 -13843975 + L1MC4 LINE L1 7453 7557 -228 222 37 0 0 chr20 58310148 58310175 -13843707 + (TTCA)n Simple_repeat Simple_repeat 4 30 0 831 219 16 16 chr20 58310178 58310370 -13843512 + MIR SINE MIR 70 261 -1 2142 104 3 0 chr20 58310829 58311126 -13842756 + AluSx SINE Alu 1 298 -14 268 285 108 8 chr20 58311133 58311263 -13842619 - L1MC4 LINE L1 -64 7978 7836 935 238 52 64 chr20 58311285 58311546 -13842336 + L1ME3 LINE L1 5836 6095 -67 1824 153 0 3 chr20 58311546 58311858 -13842024 + AluJo SINE Alu 1 311 0 935 238 52 64 chr20 58311858 58311923 -13841959 + L1ME3 LINE L1 6095 6159 -3 361 229 48 38 chr20 58312133 58312238 -13841644 - MIR SINE MIR -141 121 16 473 343 56 17 chr20 58312490 58312723 -13841159 + MIR SINE MIR 21 262 0 600 205 20 53 chr20 58312916 58313017 -13840865 + MER45A DNA AcHobo 1 104 -1477 1576 182 0 85 chr20 58313017 58313186 -13840696 - AluJo SINE Alu 0 302 120 1829 132 22 29 chr20 58313186 58313360 -13840522 - AluSx SINE Alu -2 310 136 438 20 0 0 chr20 58313360 58313411 -13840471 + (TA)n Simple_repeat Simple_repeat 1 51 0 2348 90 0 3 chr20 58313412 58313722 -13840160 - AluSc SINE Alu 0 309 1 1829 132 22 29 chr20 58313722 58313856 -13840026 - AluSx SINE Alu -175 137 2 2087 120 10 3 chr20 58313858 58314167 -13839715 - AluSq SINE Alu -2 311 1 1576 182 0 85 chr20 58314167 58314324 -13839558 - AluJo SINE Alu -183 119 1 600 205 20 53 chr20 58314324 58314373 -13839509 + MER45A DNA AcHobo 104 146 -32 208 175 25 0 chr20 58314477 58314517 -13839365 + MIR SINE MIR 104 144 -118 30 0 0 0 chr20 58314709 58314739 -13839143 + AT_rich Low_complexity Low_complexity 1 30 0 872 106 68 0 chr20 58314746 58314904 -13838978 + L1PA10 LINE L1 6008 6174 0 867 200 19 6 chr20 58314904 58315064 -13838818 - AluJo SINE Alu -30 282 121 1116 265 90 80 chr20 58315337 58315408 -13838474 - L1ME3A LINE L1 -54 6116 6047 2105 120 0 7 chr20 58315408 58315707 -13838175 - AluSx SINE Alu -15 297 1 1116 265 90 80 chr20 58315707 58316057 -13837825 - L1ME3A LINE L1 -123 6047 5702 979 199 0 0 chr20 58316057 58316223 -13837659 - FRAM SINE Alu 0 166 1 1116 265 90 80 chr20 58316223 58316392 -13837490 - L1ME3A LINE L1 -468 5702 5514 2036 121 3 26 chr20 58316392 58316705 -13837177 - AluSx SINE Alu -6 306 1 1116 265 90 80 chr20 58316705 58316814 -13837068 - L1ME3A LINE L1 -656 5514 5408 197 273 130 0 chr20 58317442 58317519 -13836363 + L2 LINE L2 3225 3311 -2 499 301 61 82 chr20 58317520 58317998 -13835884 - L2 LINE L2 -20 3293 2826 182 380 0 0 chr20 58318104 58318175 -13835707 + MIR SINE MIR 179 249 -13 830 188 0 25 chr20 58318215 58318375 -13835507 - FRAM SINE Alu -21 155 1 357 328 39 0 chr20 58318668 58318796 -13835086 + L2 LINE L2 3180 3312 -1 183 162 0 0 chr20 58318825 58318862 -13835020 + (TGGA)n Simple_repeat Simple_repeat 3 39 0 216 163 0 0 chr20 58318893 58318936 -13834946 + (TGGG)n Simple_repeat Simple_repeat 2 44 0 187 234 31 62 chr20 58319366 58319430 -13834452 - MER5A DNA MER1_type -73 116 55 415 330 146 23 chr20 58319602 58319951 -13833931 + L1MC4a LINE L1 5694 6085 -1723 268 198 11 11 chr20 58320354 58320445 -13833437 + GA-rich Low_complexity Low_complexity 2 92 0 367 320 93 55 chr20 58320999 58321548 -13832334 + L2 LINE L2 2634 3246 -26 216 0 0 0 chr20 58321665 58321689 -13832193 + (CCCCAG)n Simple_repeat Simple_repeat 6 29 0 255 270 16 0 chr20 58322314 58322377 -13831505 + MIR SINE MIR 115 178 -84 596 299 116 48 chr20 58322447 58322591 -13831291 + L2 LINE L2 2550 2683 -589 2023 106 0 0 chr20 58322591 58322864 -13831018 + AluSx SINE Alu 1 273 -39 192 40 0 0 chr20 58322872 58322897 -13830985 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 596 299 116 48 chr20 58322897 58323192 -13830690 + L2 LINE L2 2689 2962 -310 1082 261 97 19 chr20 58323192 58323613 -13830269 + LTR16A1 LTR ERVL 2 455 -2 596 299 116 48 chr20 58323613 58323841 -13830041 + L2 LINE L2 2962 3272 0 549 251 207 16 chr20 58323874 58324125 -13829757 - MLT1L LTR MaLR -149 466 168 253 307 7 7 chr20 58324442 58324582 -13829300 + GA-rich Low_complexity Low_complexity 2 141 0 512 314 71 5 chr20 58325181 58325391 -13828491 + MIR SINE MIR 29 252 -10 267 318 116 0 chr20 58325452 58325581 -13828301 - MIR SINE MIR -105 157 14 1503 271 78 7 chr20 58325946 58326805 -13827077 + L2 LINE L2 2390 3313 0 234 310 96 42 chr20 58326914 58327153 -13826729 + L2 LINE L2 3039 3290 -23 1018 260 101 3 chr20 58327652 58327960 -13825922 + MER102b DNA MER1_type 4 341 0 317 257 168 0 chr20 58328063 58328164 -13825718 - L2 LINE L2 -3 3310 3193 577 299 89 6 chr20 58329149 58329430 -13824452 - L2 LINE L2 -270 3002 2705 2139 122 3 0 chr20 58329459 58329762 -13824120 + AluSx SINE Alu 1 304 -8 557 312 25 25 chr20 58329803 58330002 -13823880 + L2 LINE L2 3114 3312 -1 575 265 59 0 chr20 58330240 58330410 -13823472 - MIR SINE MIR -70 192 13 372 262 57 14 chr20 58330411 58330552 -13823330 + MIR SINE MIR 31 145 -63 780 273 12 59 chr20 58331244 58331380 -13822502 + MIR SINE MIR 16 136 -126 2231 110 7 0 chr20 58331380 58331689 -13822193 + AluSx SINE Alu 1 311 -1 780 273 12 59 chr20 58331689 58331808 -13822074 + MIR SINE MIR 136 259 -3 495 285 98 34 chr20 58331822 58332057 -13821825 + MIR SINE MIR 7 256 -6 224 294 21 20 chr20 58332071 58332214 -13821668 + MIR SINE MIR 5 239 -23 1586 138 50 18 chr20 58332497 58332779 -13821103 - AluJo SINE Alu -21 291 1 261 304 0 38 chr20 58333038 58333117 -13820765 + LTR67 LTR ERVL 3 78 -479 411 315 123 18 chr20 58333277 58333496 -13820386 + L2 LINE L2 2717 2958 -356 295 217 0 17 chr20 58333751 58333811 -13820071 + MER106B DNA MER1_type 15 73 -986 2250 82 0 0 chr20 58333837 58334150 -13819732 + AluSx SINE Alu 1 312 0 329 315 7 20 chr20 58334150 58334350 -13819532 + (CAACT)n Simple_repeat Simple_repeat 1 197 0 301 253 6 11 chr20 58334372 58334546 -13819336 + (CAGCT)n Simple_repeat Simple_repeat 4 176 0 2356 79 3 0 chr20 58334576 58334879 -13819003 - AluSp SINE Alu -9 304 1 1805 162 0 25 chr20 58334882 58335197 -13818685 - AluJb SINE Alu -5 307 1 228 272 172 7 chr20 58335454 58335750 -13818132 - L2 LINE L2 -271 3001 2646 764 204 133 19 chr20 58335849 58336060 -13817822 - MIR SINE MIR 0 262 28 2067 118 0 32 chr20 58336325 58336638 -13817244 - AluSx SINE Alu -9 303 1 557 282 183 22 chr20 58336713 58337226 -13816656 + L2 LINE L2 2721 3300 -13 240 86 0 0 chr20 58337229 58337264 -13816618 + (TGAA)n Simple_repeat Simple_repeat 4 38 0 224 245 0 0 chr20 58337585 58337634 -13816248 - MIR SINE MIR -135 127 79 202 250 0 19 chr20 58338453 58338505 -13815377 + MIR3 SINE MIR 115 165 -43 255 211 35 0 chr20 58338544 58338601 -13815281 + MIR SINE MIR 63 121 -87 930 199 31 5 chr20 58338966 58339162 -13814720 - L1ME1 LINE L1 -4 6162 5962 1006 277 43 43 chr20 58339170 58339611 -13814271 - L1MC4 LINE L1 0 8042 7602 673 37 0 0 chr20 58339642 58339724 -13814158 - AluSg/x SINE Alu -10 300 219 587 254 42 12 chr20 58340007 58340172 -13813710 + MIR SINE MIR 51 220 -42 605 256 176 16 chr20 58340535 58340836 -13813046 - L1MC4a LINE L1 -532 5651 5605 1721 79 0 37 chr20 58340836 58341077 -13812805 + AluY SINE Alu 58 289 -22 605 256 176 16 chr20 58341077 58341108 -13812774 - L1MC4a LINE L1 -578 5605 5580 1918 140 3 7 chr20 58341110 58341418 -13812464 - AluJb SINE Alu 0 312 6 345 235 180 22 chr20 58341427 58341561 -13812321 - L1P1 LINE L1 -331 5824 5668 366 245 10 49 chr20 58341786 58341888 -13811994 + MER5A DNA MER1_type 9 106 -83 182 319 99 50 chr20 58341812 58341894 -13811988 - MER5B DNA MER1_type -24 154 61 * 2019 116 7 13 chr20 58341894 58342197 -13811685 - AluSx SINE Alu -11 301 1 182 319 99 50 chr20 58342197 58342255 -13811627 - MER5B DNA MER1_type -117 61 7 637 222 50 50 chr20 58342324 58342522 -13811360 + MIR SINE MIR 46 243 -19 235 250 43 55 chr20 58342585 58342749 -13811133 + (TCTCTG)n Simple_repeat Simple_repeat 5 166 0 2228 110 3 0 chr20 58343004 58343314 -13810568 - AluSx SINE Alu -1 311 1 633 311 85 28 chr20 58343473 58343827 -13810055 - L2 LINE L2 -29 3284 2911 345 277 36 0 chr20 58343886 58343998 -13809884 + MIR SINE MIR 74 189 -73 221 236 18 0 chr20 58344190 58344245 -13809637 + MIR SINE MIR 182 237 -25 520 129 0 12 chr20 58344702 58344810 -13809072 + AluS SINE Alu 224 311 0 1510 251 148 22 chr20 58344898 58344937 -13808945 - L1ME3 LINE L1 -3 6159 6126 1698 101 0 0 chr20 58344937 58345174 -13808708 - AluY SINE Alu -11 300 64 1510 251 148 22 chr20 58345174 58345669 -13808213 - L1ME3 LINE L1 -36 6126 5558 474 33 0 0 chr20 58345687 58345747 -13808135 + (CA)n Simple_repeat Simple_repeat 2 61 0 585 264 42 0 chr20 58346185 58346352 -13807530 + MIR SINE MIR 28 201 -61 * 654 242 81 16 chr20 58346332 58346518 -13807364 + MIR SINE MIR 16 213 -49 181 263 53 0 chr20 58346720 58346777 -13807105 + MIR SINE MIR 117 176 -86 255 278 33 11 chr20 58347693 58347783 -13806099 + MIR3 SINE MIR 81 172 -36 369 0 0 0 chr20 58347812 58347853 -13806029 + (TTCA)n Simple_repeat Simple_repeat 2 42 0 425 221 150 0 chr20 58347882 58348032 -13805850 - MER45A DNA AcHobo 0 178 1 184 359 39 19 chr20 58348033 58348136 -13805746 - L2 LINE L2 -24 3248 3144 471 293 116 28 chr20 58348291 58348506 -13805376 - MIR SINE MIR 0 262 29 332 265 81 37 chr20 58348925 58349061 -13804821 + L3 LINE CR1 1406 1547 -30 355 282 39 95 chr20 58349152 58349436 -13804446 - L1MC4a LINE L1 -1746 6062 5795 296 316 6 51 chr20 58349753 58349911 -13803971 - L2 LINE L2 -181 3091 2941 662 244 113 48 chr20 58349955 58350185 -13803697 - MIR SINE MIR -12 250 6 449 303 33 26 chr20 58350665 58350817 -13803065 - MIR SINE MIR -74 188 36 395 274 121 0 chr20 58351448 58351572 -13802310 - MIR SINE MIR -21 241 103 238 238 63 0 chr20 58351731 58351794 -13802088 + MIR SINE MIR 106 172 -90 885 133 0 30 chr20 58353157 58353292 -13800590 + FLAM_C SINE Alu 1 131 -2 241 196 20 0 chr20 58353457 58353508 -13800374 - MIR SINE MIR -38 224 173 554 211 24 0 chr20 58353509 58353632 -13800250 - MIR SINE MIR -46 216 91 420 290 191 24 chr20 58353647 58353899 -13799983 - L2 LINE L2 -21 3292 2999 309 298 0 0 chr20 58354226 58354310 -13799572 - MIR SINE MIR -132 130 47 197 250 180 22 chr20 58354973 58355062 -13798820 + MIR SINE MIR 44 147 -61 232 162 0 0 chr20 58355606 58355643 -13798239 + L2 LINE L2 3258 3294 -19 1445 153 47 43 chr20 58355696 58355996 -13797886 - AluJb SINE Alu -11 301 1 651 303 197 0 chr20 58355999 58356457 -13797425 - L2 LINE L2 -2 3311 2757 828 154 29 7 chr20 58356596 58356732 -13797150 - AluJo SINE Alu -173 139 1 681 249 18 6 chr20 58356927 58357096 -13796786 - MIR3 SINE MIR -17 191 21 235 292 14 0 chr20 58357213 58357285 -13796597 - MER20 DNA MER1_type 0 219 147 2093 131 0 3 chr20 58357762 58358074 -13795808 - AluSx SINE Alu -1 311 1 2214 112 0 0 chr20 58358083 58358388 -13795494 - AluSx SINE Alu -7 305 1 5884 186 30 31 chr20 58358389 58358520 -13795362 - L1MC3 LINE L1 -9 7776 7646 1331 196 83 11 chr20 58358520 58358785 -13795097 - AluJo SINE Alu -24 288 5 5884 186 30 31 chr20 58358785 58359908 -13793974 - L1MC3 LINE L1 -139 7646 6524 1681 181 0 3 chr20 58359932 58360220 -13793662 - AluJo SINE Alu -20 292 6 643 275 18 40 chr20 58360263 58360485 -13793397 - MIR SINE MIR -4 258 42 391 333 20 0 chr20 58361187 58361340 -13792542 + Charlie8 DNA MER1_type 36 191 -2226 467 304 48 26 chr20 58361389 58361616 -13792266 + MIR SINE MIR 25 256 -6 882 249 247 11 chr20 58361832 58362197 -13791685 - L2 LINE L2 0 3313 2863 270 73 0 0 chr20 58362551 58362592 -13791290 + (TG)n Simple_repeat Simple_repeat 2 42 0 621 249 113 28 chr20 58362889 58363278 -13790604 + L2 LINE L2 2555 2976 -338 200 243 43 179 chr20 58363395 58363535 -13790347 + L2 LINE L2 3191 3311 -2 318 358 54 0 chr20 58363703 58363851 -13790031 - L1M4c LINE L1 -5273 1111 956 181 183 33 17 chr20 58363858 58363918 -13789964 + CT-rich Low_complexity Low_complexity 2 62 0 627 310 60 21 chr20 58364494 58364778 -13789104 + L2 LINE L2 2862 3156 -116 610 295 113 47 chr20 58364978 58365577 -13788305 + L2 LINE L2 2536 3252 -61 724 76 0 139 chr20 58366002 58366146 -13787736 - L1MB5 LINE L1 -1 6173 6050 447 92 0 0 chr20 58366147 58366212 -13787670 + (TCCCC)n Simple_repeat Simple_repeat 1 65 0 1712 171 20 7 chr20 58366212 58366505 -13787377 - AluJb SINE Alu -15 297 1 1906 159 13 35 chr20 58366505 58366743 -13787139 - L1MB5 LINE L1 -113 6061 5834 2297 91 3 7 chr20 58366743 58367051 -13786831 - AluSx SINE Alu -1 311 5 1906 159 13 35 chr20 58367051 58367208 -13786674 - L1MB5 LINE L1 -340 5834 5675 321 26 0 0 chr20 58367209 58367247 -13786635 + (TG)n Simple_repeat Simple_repeat 2 39 0 2163 113 0 3 chr20 58367260 58367562 -13786320 - AluSx SINE Alu -11 301 1 2059 125 3 0 chr20 58368246 58368550 -13785332 - AluSx SINE Alu -7 305 1 191 289 144 11 chr20 58368551 58368641 -13785241 - MIR SINE MIR -59 149 48 362 315 49 30 chr20 58368750 58368953 -13784929 + MIR SINE MIR 32 238 -24 271 306 69 17 chr20 58369354 58369498 -13784384 - MIR SINE MIR 0 262 111 359 279 195 37 chr20 58369651 58369841 -13784041 + MIR SINE MIR 43 262 0 672 278 98 34 chr20 58370275 58370292 -13783590 - MIR SINE MIR 0 262 248 1801 148 0 32 chr20 58370292 58370603 -13783279 + AluSx SINE Alu 3 303 -9 672 278 98 34 chr20 58370603 58370819 -13783063 - MIR SINE MIR -14 248 14 227 281 50 45 chr20 58370828 58370971 -13782911 - MIR SINE MIR -65 143 30 236 274 123 19 chr20 58371266 58371372 -13782510 - MIR3 SINE MIR -84 124 8 515 231 100 0 chr20 58371475 58371605 -13782277 - MIR SINE MIR -70 192 50 319 294 80 64 chr20 58371969 58372156 -13781726 - MIR SINE MIR -3 259 70 240 310 0 0 chr20 58372358 58372429 -13781453 + MIR SINE MIR 173 243 -19 355 290 149 48 chr20 58372722 58372835 -13781047 - MLT1L LTR MaLR -221 394 294 2321 88 0 7 chr20 58372835 58373141 -13780741 - AluSx SINE Alu -8 304 1 355 290 149 48 chr20 58373141 58373275 -13780607 - MLT1L LTR MaLR -321 294 122 754 295 133 10 chr20 58373664 58374071 -13779811 + L2 LINE L2 2394 2850 -464 234 0 0 0 chr20 58375469 58375495 -13778387 + (TTCA)n Simple_repeat Simple_repeat 1 26 0 390 356 49 41 chr20 58375531 58375798 -13778084 - L2 LINE L2 -90 3182 2914 213 346 8 24 chr20 58376088 58376215 -13777667 - MIR SINE MIR -32 230 106 439 233 42 33 chr20 58376748 58376868 -13777014 - L2 LINE L2 -7 3306 3186 992 328 108 1 chr20 58377074 58377753 -13776129 - L2 LINE L2 -6 3307 2546 381 257 9 0 chr20 58378313 58378418 -13775464 + MER117 DNA MER1_type 57 162 -35 1494 174 0 32 chr20 58378539 58378821 -13775061 + AluJo SINE Alu 40 312 0 243 268 18 0 chr20 58378835 58378891 -13774991 + MIR SINE MIR 117 173 -89 223 256 56 33 chr20 58378913 58379003 -13774879 - MIR SINE MIR -80 128 37 210 118 0 0 chr20 58379334 58379368 -13774514 + (TCC)n Simple_repeat Simple_repeat 2 35 0 361 275 42 85 chr20 58379579 58379768 -13774114 - MIR SINE MIR -2 260 80 557 195 172 0 chr20 58380035 58380209 -13773673 + LTR16C LTR ERVL 288 491 0 440 239 65 36 chr20 58380214 58380352 -13773530 + MIR SINE MIR 5 146 -116 847 281 188 16 chr20 58380855 58381679 -13772203 + L2 LINE L2 2342 3310 -3 625 258 146 26 chr20 58382213 58382724 -13771158 + L2 LINE L2 2459 3060 -253 288 324 78 8 chr20 58382823 58383010 -13770872 - MIR SINE MIR -33 229 20 676 168 0 0 chr20 58383419 58383532 -13770350 + MIR SINE MIR 53 165 -97 1858 155 0 16 chr20 58383533 58383849 -13770033 + AluJo SINE Alu 1 311 -1 571 309 76 38 chr20 58383997 58384288 -13769594 + L2 LINE L2 3012 3313 0 396 260 21 0 chr20 58384427 58384523 -13769359 - MIR SINE MIR -63 145 48 314 207 23 23 chr20 58384669 58384756 -13769126 + (TCTCTG)n Simple_repeat Simple_repeat 2 88 0 402 274 152 25 chr20 58384954 58385158 -13768724 + MIR SINE MIR 21 250 -12 306 303 92 0 chr20 58385245 58385295 -13768587 - MIR SINE MIR -15 247 203 1168 212 9 0 chr20 58385295 58385517 -13768365 + MER58A DNA MER1_type 1 224 0 306 303 92 0 chr20 58385517 58385585 -13768297 - MIR SINE MIR -59 203 118 344 331 131 6 chr20 58386425 58386585 -13767297 + MIR SINE MIR 62 241 -21 1340 272 98 35 chr20 58386712 58387571 -13766311 + L2 LINE L2 2214 3129 -184 214 289 26 44 chr20 58387799 58387913 -13765969 - MIR3 SINE MIR -39 169 58 486 232 32 0 chr20 58388248 58388373 -13765509 + MIR SINE MIR 59 187 -75 * 527 282 171 26 chr20 58388372 58388716 -13765166 + L2 LINE L2 2865 3258 -14 312 27 0 0 chr20 58388718 58388755 -13765127 + (TGAA)n Simple_repeat Simple_repeat 2 38 0 249 337 24 0 chr20 58389074 58389157 -13764725 - MIR3 SINE MIR -37 171 87 482 290 83 0 chr20 58389274 58389419 -13764463 + MIR SINE MIR 26 182 -80 402 193 90 90 chr20 58390142 58390287 -13763595 - Charlie8 DNA MER1_type -2257 160 16 358 306 41 20 chr20 58390795 58390991 -13762891 + LTR67 LTR ERVL 123 322 -235 2332 73 0 13 chr20 58391280 58391582 -13762300 - AluY SINE Alu -13 298 1 392 315 86 74 chr20 58392145 58392551 -13761331 - L2 LINE L2 -15 3298 2888 871 200 19 42 chr20 58392577 58392792 -13761090 - MER20 DNA MER1_type -3 216 7 320 266 172 47 chr20 58392799 58392968 -13760914 - L2 LINE L2 -642 2672 2483 897 159 0 0 chr20 58393297 58393429 -13760453 + FLAM_C SINE Alu 2 133 0 22 35 0 0 chr20 58393429 58393458 -13760424 + AT_rich Low_complexity Low_complexity 1 29 0 343 196 115 81 chr20 58393551 58393648 -13760234 - Charlie8 DNA MER1_type -98 232 127 1221 83 193 5 chr20 58393648 58393840 -13760042 + MER30 DNA MER1_type 3 230 0 343 196 115 81 chr20 58393840 58393890 -13759992 - Charlie8 DNA MER1_type -203 127 80 30 69 0 0 chr20 58394460 58394518 -13759364 + AT_rich Low_complexity Low_complexity 1 58 0 1978 134 17 3 chr20 58394563 58394861 -13759021 - AluSx SINE Alu -10 302 1 561 225 78 6 chr20 58395651 58395813 -13758069 - MIR SINE MIR -65 143 20 521 245 26 33 chr20 58395857 58396008 -13757874 - MIR SINE MIR -104 158 9 349 387 91 17 chr20 58395930 58396160 -13757722 + MIR SINE MIR 5 251 -11 * 252 351 0 0 chr20 58396190 58396267 -13757615 + MIR SINE MIR 178 254 -8 320 239 88 35 chr20 58396474 58396587 -13757295 + MIR SINE MIR 22 140 -68 316 333 115 6 chr20 58397102 58397267 -13756615 - MIR SINE MIR -3 259 77 349 285 271 0 chr20 58397287 58397431 -13756451 - MIR SINE MIR -65 197 15 442 378 50 21 chr20 58397477 58397718 -13756164 + MIR SINE MIR 15 262 0 754 255 187 38 chr20 58397955 58398398 -13755484 - L2 LINE L2 -1 3312 2804 184 329 143 29 chr20 58398448 58398588 -13755294 - MIR3 SINE MIR -18 190 35 217 252 178 44 chr20 58398681 58398816 -13755066 - L2 LINE L2 -223 3049 2897 455 231 12 10 chr20 58399034 58399163 -13754719 + MIR SINE MIR 10 140 -68 421 246 153 0 chr20 58399217 58399335 -13754547 - L2 LINE L2 0 3313 3178 795 222 130 9 chr20 58399335 58399551 -13754331 + MIR SINE MIR 4 245 -17 193 204 61 41 chr20 58399639 58399688 -13754194 + L2 LINE L2 3249 3298 -15 401 271 64 27 chr20 58400569 58400757 -13753125 - L2 LINE L2 -250 3063 2869 344 282 89 24 chr20 58401159 58401283 -13752599 - MIR SINE MIR -61 147 16 194 300 140 50 chr20 58401316 58401516 -13752366 + L3 LINE CR1 1304 1521 -56 366 304 122 28 chr20 58401608 58401855 -13752027 + L2 LINE L2 2681 2950 -364 446 241 95 30 chr20 58401885 58402052 -13751830 - MIR SINE MIR -65 143 16 221 316 20 20 chr20 58402034 58402132 -13751750 + L2 LINE L2 2962 3059 -213 * 835 270 18 54 chr20 58402227 58402560 -13751322 - L1ME1 LINE L1 -5 6161 5841 484 265 68 0 chr20 58402593 58402710 -13751172 + L2 LINE L2 3138 3262 -10 205 271 74 49 chr20 58403436 58403538 -13750344 - MIR SINE MIR -63 145 48 290 305 49 0 chr20 58403571 58403653 -13750229 - L2 LINE L2 -3 3310 3225 2157 83 3 3 chr20 58403653 58403943 -13749939 + AluSc SINE Alu 1 290 -19 378 315 6 55 chr20 58404329 58404510 -13749372 + L2 LINE L2 3006 3177 -95 250 333 10 0 chr20 58404549 58404651 -13749231 + (TGGA)n Simple_repeat Simple_repeat 2 104 0 295 261 6 6 chr20 58404667 58404824 -13749058 + (TGAA)n Simple_repeat Simple_repeat 4 160 0 210 274 0 0 chr20 58404898 58405000 -13748882 + (TAAA)n Simple_repeat Simple_repeat 4 105 0 696 243 2 12 chr20 58405000 58405602 -13748280 + (TGGA)n Simple_repeat Simple_repeat 1 595 0 758 299 50 12 chr20 58406030 58406271 -13747611 + MIR SINE MIR 13 262 0 357 305 103 66 chr20 58407060 58407234 -13746648 - L2 LINE L2 -161 3111 2922 2305 100 0 3 chr20 58407234 58407543 -13746339 + AluSx SINE Alu 1 308 -4 357 305 103 66 chr20 58407543 58407640 -13746242 - L2 LINE L2 -350 2922 2830 452 396 41 16 chr20 58407722 58408159 -13745723 - L2 LINE L2 -620 2694 2247 225 337 61 0 chr20 58408383 58408481 -13745401 + MIR SINE MIR 46 149 -113 532 299 87 45 chr20 58408900 58409188 -13744694 + MER102b DNA MER1_type 1 300 -41 317 172 42 11 chr20 58409769 58409856 -13744026 + MIR SINE MIR 75 169 -81 250 267 209 0 chr20 58409913 58409999 -13743883 + MIR SINE MIR 2 105 -157 1241 249 74 13 chr20 58410053 58410706 -13743176 - L2 LINE L2 0 3313 2608 337 241 149 18 chr20 58410719 58410951 -13742931 + L2 LINE L2 2715 2981 -291 189 280 80 27 chr20 58411000 58411075 -13742807 - L2 LINE L2 -3228 86 8 401 218 44 10 chr20 58411103 58411250 -13742632 + MIR SINE MIR 22 179 -59 705 268 76 5 chr20 58411456 58411680 -13742202 + MIR SINE MIR 8 247 -15 252 0 0 0 chr20 58411698 58411726 -13742156 + (TTA)n Simple_repeat Simple_repeat 3 30 0 521 264 69 7 chr20 58411731 58411875 -13742007 + MIR SINE MIR 67 219 -43 181 0 0 0 chr20 58411893 58411913 -13741969 + (TTTG)n Simple_repeat Simple_repeat 1 180 0 2213 96 0 3 chr20 58411913 58412195 -13741687 - AluSx SINE Alu -31 281 1 304 243 5 0 chr20 58412501 58412585 -13741297 + MIR SINE MIR 79 145 -63 472 257 112 17 chr20 58413267 58413477 -13740405 + MIR SINE MIR 36 262 0 922 218 155 51 chr20 58413619 58414051 -13739831 - L2 LINE L2 -10 3303 2827 309 169 0 0 chr20 58414522 58414581 -13739301 + (TG)n Simple_repeat Simple_repeat 1 59 0 1506 201 28 9 chr20 58415033 58415351 -13738531 + MSTD LTR MaLR 73 396 0 225 256 44 14 chr20 58415351 58415457 -13738425 - MIR SINE MIR -70 138 37 374 234 43 0 chr20 58416030 58416124 -13737758 + MIR SINE MIR 80 177 -85 936 250 203 6 chr20 58416161 58416521 -13737361 + L2 LINE L2 2871 3301 -12 241 288 51 34 chr20 58416540 58416658 -13737224 + MIR3 SINE MIR 56 175 -33 266 269 0 0 chr20 58417225 58417292 -13736590 - MIR SINE MIR -59 149 83 591 240 176 25 chr20 58417347 58417551 -13736331 + MLT1K LTR MaLR 28 262 -326 438 281 14 14 chr20 58417686 58417825 -13736057 + MLT1K LTR MaLR 446 584 -4 205 255 94 28 chr20 58417923 58418029 -13735853 - L2 LINE L2 -235 3037 2925 714 287 43 12 chr20 58418244 58418498 -13735384 - MER113 DNA MER1_type? -20 501 240 350 292 62 0 chr20 58418557 58418701 -13735181 - L1ME3A LINE L1 -95 6075 5923 3030 208 4 46 chr20 58418701 58419517 -13734365 - L1ME1 LINE L1 -198 5968 5189 811 223 4 36 chr20 58419520 58419771 -13734111 - MER113 DNA MER1_type? -270 251 9 337 276 11 0 chr20 58419779 58419866 -13734016 - L2 LINE L2 0 3313 3226 684 296 113 29 chr20 58420394 58420617 -13733265 + L2 LINE L2 2826 3029 -284 1931 143 6 47 chr20 58420617 58420939 -13732943 - AluJo SINE Alu -1 311 3 684 296 113 29 chr20 58420939 58421165 -13732717 + L2 LINE L2 3029 3313 0 943 261 135 34 chr20 58421691 58422128 -13731754 - LTR16C LTR ERVL 0 491 11 394 283 23 0 chr20 58422529 58422714 -13731168 + L1MC/D LINE L1 4646 4835 -1311 945 249 50 4 chr20 58422981 58423262 -13730620 - MER113 DNA MER1_type? -110 411 118 1495 164 69 28 chr20 58423264 58423329 -13730553 + L1MB5 LINE L1 5836 5897 -277 2125 137 3 0 chr20 58423329 58423635 -13730247 - AluJb SINE Alu -5 307 1 1495 164 69 28 chr20 58423635 58423887 -13729995 + L1MB5 LINE L1 5897 6166 -8 251 271 112 0 chr20 58424211 58424318 -13729564 + L2 LINE L2 2956 3074 -198 384 275 105 53 chr20 58424342 58424513 -13729369 + MIR SINE MIR 47 226 -36 884 271 65 12 chr20 58424704 58425192 -13728690 + L2 LINE L2 2539 3051 -262 673 216 149 0 chr20 58425880 58426074 -13727808 - MIR SINE MIR -24 238 16 402 260 47 20 chr20 58426416 58426598 -13727284 - MIR SINE MIR -52 156 16 291 259 0 17 chr20 58426721 58426962 -13726920 + (TCCA)n Simple_repeat Simple_repeat 1 237 0 564 220 0 0 chr20 58426973 58427132 -13726750 + (TCCA)n Simple_repeat Simple_repeat 4 162 0 326 380 135 0 chr20 58427450 58427650 -13726232 - MIR SINE MIR 0 262 36 517 224 150 7 chr20 58427667 58427814 -13726068 - MIR SINE MIR 0 262 95 1114 217 5 0 chr20 58428018 58428239 -13725643 - MER58A DNA MER1_type -2 222 1 831 289 45 6 chr20 58428824 58429225 -13724657 + L1MC/D LINE L1 5197 5609 -747 433 229 17 97 chr20 58429353 58429528 -13724354 + LTR67 LTR ERVL 38 198 -359 273 234 85 11 chr20 58429536 58429630 -13724252 + LTR67 LTR ERVL 355 455 -102 2561 253 58 27 chr20 58429652 58430499 -13723383 - L1ME3A LINE L1 0 6170 5298 1431 189 56 53 chr20 58430545 58430834 -13723048 - MLT2C1 LTR ERVL 0 397 110 2083 141 3 6 chr20 58430834 58431147 -13722735 - AluSx SINE Alu 0 312 1 2308 104 3 16 chr20 58431156 58431463 -13722419 - AluSg SINE Alu -6 304 2 1431 189 56 53 chr20 58431463 58431559 -13722323 - MLT2C1 LTR ERVL -294 103 1 27 33 0 50 chr20 58431784 58431844 -13722038 + AT_rich Low_complexity Low_complexity 1 57 0 728 288 71 56 chr20 58431890 58432259 -13721623 - L2 LINE L2 -2 3311 2934 2427 103 3 14 chr20 58432259 58432627 -13721255 - THE1B LTR MaLR 0 364 1 728 288 71 56 chr20 58432627 58432649 -13721233 - L2 LINE L2 -379 2934 2914 423 289 35 0 chr20 58433050 58433164 -13720718 - MIR SINE MIR -49 213 96 1908 144 0 51 chr20 58433179 58433492 -13720390 - AluJb SINE Alu -15 297 1 723 268 245 15 chr20 58433700 58434096 -13719786 + L2 LINE L2 2827 3313 0 207 204 0 0 chr20 58434096 58434145 -13719737 + (TGGA)n Simple_repeat Simple_repeat 2 50 0 1140 158 0 3 chr20 58434171 58434536 -13719346 + (TGGA)n Simple_repeat Simple_repeat 1 363 0 317 230 10 0 chr20 58434547 58434647 -13719235 + (TGGA)n Simple_repeat Simple_repeat 4 104 0 366 324 42 14 chr20 58435190 58435332 -13718550 - MIR SINE MIR -81 181 36 370 247 0 11 chr20 58435394 58435483 -13718399 + MIR SINE MIR 66 153 -55 1117 279 28 16 chr20 58436331 58436654 -13717228 - LTR16C LTR ERVL -10 481 155 318 253 55 11 chr20 58436783 58436874 -13717008 + L2 LINE L2 2976 3070 -202 250 311 19 28 chr20 58437191 58437297 -13716585 - MER5B DNA MER1_type -1 177 73 365 293 73 0 chr20 58437619 58437742 -13716140 + MER5B DNA MER1_type 2 133 -45 587 231 115 0 chr20 58437853 58438009 -13715873 - MIR SINE MIR -28 234 61 22 0 0 0 chr20 58438160 58438182 -13715700 + AT_rich Low_complexity Low_complexity 1 22 0 364 274 48 3 chr20 58438519 58438644 -13715238 + MIR3 SINE MIR 36 167 -41 2073 155 0 0 chr20 58438661 58438965 -13714917 + AluSx SINE Alu 2 305 -7 243 0 0 0 chr20 58438965 58439004 -13714878 + (CA)n Simple_repeat Simple_repeat 1 66 0 243 0 0 0 chr20 58439004 58439031 -13714851 + (CA)n Simple_repeat Simple_repeat 2 28 0 905 239 57 12 chr20 58439191 58439470 -13714412 - MLT1J1 LTR MaLR -103 343 64 1787 151 25 7 chr20 58439551 58439868 -13714014 - AluSx SINE Alu 0 322 1 591 110 0 0 chr20 58439875 58439957 -13713925 - tRNA-Leu-CTT tRNA tRNA -3 82 1 4201 198 55 20 chr20 58440058 58441553 -13712329 + L1MD1 LINE L1 4706 6242 0 321 355 13 7 chr20 58441705 58441857 -13712025 + MIR SINE MIR 98 250 -12 516 339 59 27 chr20 58442187 58442408 -13711474 - MIR SINE MIR -6 256 29 559 210 0 9 chr20 58443707 58443844 -13710038 + MIR SINE MIR 20 146 -62 886 265 66 50 chr20 58443845 58443991 -13709891 + L2 LINE L2 2709 2851 -462 2126 134 0 13 chr20 58443991 58444296 -13709586 - AluJb SINE Alu -11 301 1 886 265 66 50 chr20 58444296 58444732 -13709150 + L2 LINE L2 2851 3313 0 212 119 0 48 chr20 58445602 58445644 -13708238 + (GGCTG)n Simple_repeat Simple_repeat 4 43 0 821 260 29 45 chr20 58445850 58446158 -13707724 + MER102b DNA MER1_type 17 319 -22 189 258 32 0 chr20 58446159 58446221 -13707661 - L2 LINE L2 -268 3004 2941 249 200 212 24 chr20 58446246 58446331 -13707551 - L2 LINE L2 -4 3309 3209 935 220 9 18 chr20 58446331 58446549 -13707333 + MER20 DNA MER1_type 4 219 0 504 283 38 28 chr20 58447115 58447482 -13706400 - MIR SINE MIR -1 261 13 213 321 23 8 chr20 58448335 58448466 -13705416 - L2 LINE L2 -330 2983 2851 304 279 41 27 chr20 58448688 58448835 -13705047 - MIR3 SINE MIR -56 152 4 612 212 63 2 chr20 58448891 58449040 -13704842 + MIR SINE MIR 16 172 -36 442 257 153 11 chr20 58449074 58449257 -13704625 + L2 LINE L2 3100 3308 -5 201 162 0 0 chr20 58450235 58450272 -13703610 - MIR SINE MIR -8 254 218 955 260 163 22 chr20 58450892 58451384 -13702498 + MLT1K LTR MaLR 26 586 -2 1051 193 14 24 chr20 58451812 58452025 -13701857 - MER20 DNA MER1_type -2 217 7 256 254 0 0 chr20 58452028 58452087 -13701795 + L2 LINE L2 3238 3296 -17 300 287 0 11 chr20 58452156 58452243 -13701639 - LTR67 LTR ERVL -37 520 435 579 228 37 108 chr20 58452333 58452601 -13701281 + MLT1L LTR MaLR 32 280 -335 937 35 18 0 chr20 58452675 58452789 -13701093 - AluSp/q SINE Alu 0 313 198 2480 84 0 0 chr20 58452949 58453245 -13700637 - AluSq SINE Alu -17 296 1 376 257 229 0 chr20 58453741 58453920 -13699962 - MIR SINE MIR 0 262 43 2035 93 10 45 chr20 58454040 58454330 -13699552 + AluSq SINE Alu 31 310 -3 312 352 16 0 chr20 58454345 58454470 -13699412 - L2 LINE L2 0 3313 3187 715 177 15 0 chr20 58454705 58454835 -13699047 + FLAM_C SINE Alu 2 133 -10 253 294 103 37 chr20 58454862 58454998 -13698884 + MIR SINE MIR 39 183 -79 595 154 0 0 chr20 58455000 58455091 -13698791 + Tigger4(Zombi) DNA MER2_type 1 91 -2640 * 2881 154 8 10 chr20 58455086 58455591 -13698291 + Tigger4(Zombi) DNA MER2_type 2218 2721 -10 374 215 278 21 chr20 58455792 58455936 -13697946 - Charlie8 DNA MER1_type -2143 274 94 2038 109 35 39 chr20 58455936 58456247 -13697635 + AluSx SINE Alu 1 310 -2 3311 201 18 7 chr20 58456296 58457021 -13696861 + L1MB7 LINE L1 5443 6175 -9 187 328 0 0 chr20 58457477 58457538 -13696344 - L2 LINE L2 -5 3267 3207 642 253 108 23 chr20 58457596 58458055 -13695827 - L2 LINE L2 -259 3054 2547 192 77 0 0 chr20 58458135 58458161 -13695721 + (CA)n Simple_repeat Simple_repeat 2 27 0 250 242 16 74 chr20 58458193 58458383 -13695499 + (CATATA)n Simple_repeat Simple_repeat 2 180 0 405 252 91 21 chr20 58458612 58458755 -13695127 + MIR SINE MIR 56 208 -54 823 274 99 97 chr20 58459064 58459630 -13694252 - MLT1K LTR MaLR 0 588 22 308 133 47 38 chr20 58459860 58459950 -13693932 + MIR SINE MIR 98 196 -12 560 215 25 32 chr20 58459980 58460138 -13693744 - MIR SINE MIR -59 203 47 296 282 0 13 chr20 58460301 58460379 -13693503 - L2 LINE L2 -1 3312 3236 322 248 8 32 chr20 58460404 58460529 -13693353 - L2 LINE L2 -266 3047 2926 250 290 14 0 chr20 58460579 58460648 -13693234 - MIR SINE MIR -79 129 60 231 300 0 0 chr20 58461210 58461270 -13692612 - MIR SINE MIR -116 146 87 332 299 43 55 chr20 58461526 58461690 -13692192 - MIR SINE MIR 0 262 101 323 317 180 7 chr20 58462172 58462472 -13691410 + L2 LINE L2 2623 2974 -340 686 225 152 5 chr20 58462689 58462880 -13691002 - MER20 DNA MER1_type 0 219 1 359 287 45 124 chr20 58462885 58463240 -13690642 + L2 LINE L2 2931 3257 -15 328 285 177 42 chr20 58463272 58463542 -13690340 - L2 LINE L2 -2 3270 3038 537 175 0 10 chr20 58463542 58463639 -13690243 + L1MB5 LINE L1 6079 6174 0 328 285 177 42 chr20 58463639 58464059 -13689823 - L2 LINE L2 -234 3038 2458 197 246 43 0 chr20 58464201 58464270 -13689612 + MIR SINE MIR 57 128 -80 374 226 29 10 chr20 58464592 58464694 -13689188 + MIR SINE MIR 16 119 -143 1784 220 43 32 chr20 58465509 58465931 -13687951 - Charlie1 DNA MER1_type -23 2738 2307 2073 113 0 0 chr20 58465931 58466215 -13687667 - AluSx SINE Alu -28 284 1 1784 220 43 32 chr20 58466215 58466324 -13687558 - Charlie1 DNA MER1_type -454 2307 2201 469 158 307 0 chr20 58466310 58466424 -13687458 - Charlie1 DNA MER1_type -2612 149 1 * 1985 25 0 0 chr20 58466427 58466668 -13687214 - L1PA4 LINE L1 -310 5845 5605 2705 38 3 0 chr20 58466668 58466980 -13686902 + L1PA4 LINE L1 5836 6155 0 495 265 52 0 chr20 58467068 58467204 -13686678 + MIR SINE MIR 41 183 -79 477 269 28 0 chr20 58467248 58467393 -13686489 + L2 LINE L2 2914 3062 -210 229 343 45 37 chr20 58467983 58468117 -13685765 + L2 LINE L2 3179 3313 0 356 279 39 23 chr20 58468155 58468284 -13685598 - MLT1K LTR MaLR 0 588 458 243 0 0 0 chr20 58468339 58468366 -13685516 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 511 281 87 99 chr20 58468931 58469005 -13684877 - L1ME4a LINE L1 0 6121 6048 1396 161 5 5 chr20 58469005 58469223 -13684659 + MER20 DNA MER1_type 2 219 0 511 281 87 99 chr20 58469223 58469412 -13684470 - L1ME4a LINE L1 -73 6048 5858 2202 103 0 0 chr20 58469412 58469712 -13684170 - AluSg SINE Alu -10 300 1 511 281 87 99 chr20 58469712 58470198 -13683684 - L1ME4a LINE L1 -263 5858 5379 1512 153 137 4 chr20 58470199 58470461 -13683421 - AluJo SINE Alu -2 300 4 350 102 34 0 chr20 58470576 58470635 -13683247 + CT-rich Low_complexity Low_complexity 3 63 0 559 282 25 0 chr20 58471175 58471338 -13682544 + MIR SINE MIR 46 212 -50 981 312 90 17 chr20 58471426 58471891 -13681991 - MLT1L LTR MaLR -116 499 1 313 304 24 16 chr20 58472009 58472134 -13681748 + L2 LINE L2 2263 2388 -926 450 259 169 39 chr20 58472339 58472594 -13681288 + L2 LINE L2 3026 3313 0 336 380 45 10 chr20 58472595 58472887 -13680995 + L2 LINE L2 2665 2966 -348 938 313 72 17 chr20 58472973 58473318 -13680564 - MLT1J LTR MaLR -147 364 1 292 294 20 49 chr20 58473350 58473452 -13680430 + L2 LINE L2 3141 3239 -33 442 337 130 11 chr20 58473909 58474256 -13679626 + L2 LINE L2 2916 3303 -10 380 256 11 0 chr20 58474374 58474464 -13679418 - MIR SINE MIR -109 153 63 291 263 0 93 chr20 58474500 58474570 -13679312 + L1ME1 LINE L1 6051 6107 -55 1205 167 43 0 chr20 58474570 58474780 -13679102 + MER20 DNA MER1_type 1 219 0 291 263 0 93 chr20 58474780 58474827 -13679055 + L1ME1 LINE L1 6107 6157 -5 442 268 99 97 chr20 58474865 58475046 -13678836 + L1MC4a LINE L1 5265 5444 -2364 1471 132 5 0 chr20 58475046 58475266 -13678616 + AluJo SINE Alu 13 233 -79 442 268 99 97 chr20 58475266 58475331 -13678551 + L1MC4a LINE L1 5444 5507 -2301 2499 40 3 0 chr20 58475331 58475627 -13678255 + AluY SINE Alu 1 297 -14 442 268 99 97 chr20 58475627 58475954 -13677928 + L1MC4a LINE L1 5507 5840 -1968 341 300 105 26 chr20 58476223 58476413 -13677469 + MLT1J LTR MaLR 287 491 -20 215 226 108 43 chr20 58477148 58477241 -13676641 + MIR SINE MIR 45 143 -65 * 1197 277 137 36 chr20 58477221 58477504 -13676378 - L2 LINE L2 0 3313 3060 2043 115 61 0 chr20 58477504 58477799 -13676083 + AluSq SINE Alu 1 313 0 1197 277 137 36 chr20 58477799 58478501 -13675381 - L2 LINE L2 -253 3060 2204 267 274 16 0 chr20 58478502 58478564 -13675318 + MIR SINE MIR 119 181 -81 451 241 93 48 chr20 58478641 58478828 -13675054 - MIR SINE MIR -61 147 10 745 253 95 5 chr20 58478972 58479193 -13674689 + MIR SINE MIR 2 242 -20 198 366 91 43 chr20 58479276 58479462 -13674420 + MIR SINE MIR 51 245 -17 691 280 169 22 chr20 58479467 58479835 -13674047 + L1ME2 LINE L1 5742 6163 -1 2001 145 0 3 chr20 58479835 58480146 -13673736 - AluJb SINE Alu -2 310 1 390 255 132 51 chr20 58480335 58480507 -13673375 + MIR SINE MIR 3 185 -62 209 162 0 118 chr20 58480564 58480632 -13673250 + A-rich Low_complexity Low_complexity 3 62 0 434 291 57 0 chr20 58480696 58480837 -13673045 + MIR SINE MIR 86 234 -28 259 331 13 7 chr20 58481451 58481602 -13672280 + (TG)n Simple_repeat Simple_repeat 1 152 0 192 77 0 0 chr20 58481773 58481799 -13672083 + (TG)n Simple_repeat Simple_repeat 2 27 0 2131 91 0 26 chr20 58481839 58482146 -13671736 - AluSx SINE Alu -13 299 1 198 0 0 0 chr20 58482511 58482533 -13671349 + (TTCA)n Simple_repeat Simple_repeat 1 22 0 1076 289 43 31 chr20 58482535 58482950 -13670932 - L2 LINE L2 -16 3297 2878 254 228 0 18 chr20 58483900 58483957 -13669925 + MIR SINE MIR 26 81 -181 204 40 0 0 chr20 58483958 58483983 -13669899 + (TTCA)n Simple_repeat Simple_repeat 2 26 0 506 296 142 8 chr20 58483987 58484234 -13669648 - L2 LINE L2 -22 3291 3012 506 253 80 0 chr20 58484276 58484426 -13669456 + MER96 DNA MER1_type? 14 175 0 293 282 122 6 chr20 58484430 58484611 -13669271 - L2 LINE L2 -337 2977 2776 223 284 27 14 chr20 58484743 58484817 -13669065 + MIR SINE MIR 95 169 -93 255 257 43 0 chr20 58484836 58484906 -13668976 - MIR SINE MIR -103 105 33 546 119 0 0 chr20 58485170 58485254 -13668628 + (GGAA)n Simple_repeat Simple_repeat 4 87 0 401 311 52 40 chr20 58485265 58485513 -13668369 + L1MC4a LINE L1 5665 5915 -1893 897 89 0 0 chr20 58485516 58485662 -13668220 + (TG)n Simple_repeat Simple_repeat 2 147 0 222 286 0 0 chr20 58486124 58486180 -13667702 - MIR3 SINE MIR -48 160 105 * 232 308 125 10 chr20 58486178 58486282 -13667600 + MIR SINE MIR 19 134 -74 639 284 36 92 chr20 58486718 58486791 -13667091 - MLT1J LTR MaLR -92 419 343 2030 120 0 0 chr20 58486791 58487098 -13666784 - AluSx SINE Alu 0 307 1 639 284 36 92 chr20 58487098 58487467 -13666415 - MLT1J LTR MaLR -168 343 1 364 301 22 37 chr20 58487467 58487603 -13666279 - MLT1L LTR MaLR -109 506 373 670 253 21 92 chr20 58487934 58488065 -13665817 - MLT1H LTR MaLR -223 326 224 2055 112 7 20 chr20 58488065 58488233 -13665649 - AluSg SINE Alu -11 299 135 2070 93 0 14 chr20 58488233 58488645 -13665237 - AluSg SINE Alu 0 310 1 2055 112 7 20 chr20 58488645 58488779 -13665103 - AluSg SINE Alu -175 135 1 670 253 21 92 chr20 58488779 58488928 -13664954 - MLT1H LTR MaLR -325 224 66 404 353 109 24 chr20 58488935 58489346 -13664536 + L2 LINE L2 2015 2460 -854 184 396 0 0 chr20 58489391 58489482 -13664400 - MIR SINE MIR -2 260 170 281 267 179 44 chr20 58489707 58489958 -13663924 - L2 LINE L2 -1 3312 3028 568 253 33 33 chr20 58490049 58490231 -13663651 - L2 LINE L2 -518 2796 2615 201 119 48 0 chr20 58491011 58491053 -13662829 + (TAA)n Simple_repeat Simple_repeat 3 46 0 199 260 0 0 chr20 58491132 58491182 -13662700 - MIR SINE MIR -96 166 117 200 122 0 24 chr20 58491254 58491295 -13662587 + (TAAA)n Simple_repeat Simple_repeat 3 42 0 437 302 133 25 chr20 58491386 58491664 -13662218 + L2 LINE L2 2990 3297 -16 1752 164 6 22 chr20 58491715 58492026 -13661856 + AluJb SINE Alu 3 308 -4 246 315 63 9 chr20 58492354 58492465 -13661417 + Charlie8 DNA MER1_type 21 137 -2280 374 253 235 1 chr20 58492770 58492925 -13660957 + Charlie8 DNA MER1_type 94 265 -2152 852 165 0 0 chr20 58493138 58493271 -13660611 + FLAM_C SINE Alu 1 133 0 323 337 47 17 chr20 58493310 58493482 -13660400 + MIR SINE MIR 82 258 -4 201 179 26 0 chr20 58493529 58493568 -13660314 + GA-rich Low_complexity Low_complexity 3 42 0 233 359 179 0 chr20 58494150 58494295 -13659587 + MIR SINE MIR 71 241 -21 330 223 195 9 chr20 58494612 58494758 -13659124 + MIR SINE MIR 21 188 -62 180 341 98 0 chr20 58494924 58495006 -13658876 + L2 LINE L2 3205 3294 -19 229 253 0 88 chr20 58495045 58495136 -13658746 - MIR SINE MIR -77 131 49 410 268 21 35 chr20 58495419 58495561 -13658321 + Charlie8 DNA MER1_type 39 178 -2239 1208 210 51 12 chr20 58495812 58496252 -13657630 + MLT1D LTR MaLR 5 498 -7 294 303 56 34 chr20 58496255 58496433 -13657449 + MIR SINE MIR 47 228 -34 517 275 76 80 chr20 58496624 58496694 -13657188 - MIR SINE MIR 0 262 193 1588 158 16 23 chr20 58496694 58496998 -13656884 + AluJo SINE Alu 1 302 -10 1725 182 0 3 chr20 58497005 58497307 -13656575 + AluJo SINE Alu 1 301 -11 517 275 76 80 chr20 58497307 58497490 -13656392 - MIR SINE MIR -75 187 2 2064 92 55 0 chr20 58497763 58498055 -13655827 + AluSx SINE Alu 1 308 -4 565 174 103 32 chr20 58498334 58498489 -13655393 + MIR SINE MIR 63 228 -34 180 231 161 105 chr20 58498983 58499126 -13654756 - L2 LINE L2 0 3313 3163 613 249 73 11 chr20 58499140 58499317 -13654565 - MIR SINE MIR -55 207 20 459 361 87 0 chr20 58499879 58500098 -13653784 + MIR SINE MIR 10 247 -15 394 244 38 122 chr20 58500124 58500337 -13653545 - MIR SINE MIR -2 260 66 656 294 111 34 chr20 58501152 58501567 -13652315 + L2 LINE L2 2267 2713 -601 2148 97 10 3 chr20 58501567 58501877 -13652005 + AluSq SINE Alu 1 312 -1 1216 257 52 19 chr20 58501889 58502255 -13651627 + MER63B DNA MER1_type 4 381 -55 254 325 26 17 chr20 58502279 58502396 -13651486 + L2 LINE L2 3145 3262 -10 825 203 52 142 chr20 58502456 58502801 -13651081 + MER102b DNA MER1_type 23 336 -5 247 301 196 6 chr20 58503551 58503714 -13650168 - MIR SINE MIR -20 242 49 195 214 157 0 chr20 58503731 58503801 -13650081 + L2 LINE L2 3168 3248 -24 448 211 211 8 chr20 58503833 58504098 -13649784 + L2 LINE L2 2376 2694 -620 1449 244 37 58 chr20 58504136 58504937 -13648945 - L2 LINE L2 -65 3248 2469 1932 84 40 7 chr20 58504937 58505211 -13648671 + L1PA10 LINE L1 5881 6163 -5 1449 244 37 58 chr20 58505211 58505278 -13648604 - L2 LINE L2 -844 2469 2402 889 266 31 19 chr20 58505507 58505766 -13648116 - MIR SINE MIR 0 262 1 314 286 43 50 chr20 58505949 58506089 -13647793 - MIR3 SINE MIR -63 145 7 249 246 45 55 chr20 58506413 58506523 -13647359 + MIR SINE MIR 84 192 -70 361 347 63 11 chr20 58506709 58506899 -13646983 - MIR SINE MIR -28 234 35 698 231 23 121 chr20 58506948 58507082 -13646800 - MIR SINE MIR -14 248 103 1306 147 166 15 chr20 58507082 58507347 -13646535 + AluJo SINE Alu 1 305 -7 2217 111 0 13 chr20 58507351 58507667 -13646215 + AluSx SINE Alu 1 312 0 698 231 23 121 chr20 58507667 58507783 -13646099 - MIR SINE MIR -162 100 18 188 56 83 0 chr20 58508329 58508365 -13645517 + (CAGAGA)n Simple_repeat Simple_repeat 3 41 0 271 89 113 48 chr20 58508401 58508525 -13645357 + (CAGAGA)n Simple_repeat Simple_repeat 4 135 0 686 259 103 0 chr20 58508739 58508963 -13644919 + L2 LINE L2 3024 3270 -2 500 216 29 0 chr20 58509080 58509182 -13644700 + L2 LINE L2 3209 3313 0 219 385 40 0 chr20 58509226 58509374 -13644508 + L2 LINE L2 2708 2861 -453 299 359 100 23 chr20 58509758 58510017 -13643865 + L2 LINE L2 2993 3271 -1 296 259 155 9 chr20 58510061 58510177 -13643705 + L2 LINE L2 3180 3312 -1 423 360 29 0 chr20 58510198 58510334 -13643548 + L2 LINE L2 3133 3272 0 379 206 6 31 chr20 58510334 58510494 -13643388 + (TGGA)n Simple_repeat Simple_repeat 2 157 0 255 330 107 0 chr20 58510890 58510993 -13642889 + MIR SINE MIR 20 133 -129 282 333 49 32 chr20 58511199 58511322 -13642560 + MIR3 SINE MIR 14 138 -70 290 208 19 132 chr20 58511362 58511521 -13642361 - LTR67 LTR ERVL -412 145 5 1937 137 13 0 chr20 58511628 58511927 -13641955 + AluSx SINE Alu 1 303 -9 2126 102 0 3 chr20 58512008 58512301 -13641581 - AluSg SINE Alu -18 292 1 280 261 0 0 chr20 58512385 58512454 -13641428 + (TGAA)n Simple_repeat Simple_repeat 1 69 0 396 135 0 0 chr20 58512489 58512563 -13641319 + (CA)n Simple_repeat Simple_repeat 1 74 0 665 280 25 41 chr20 58512593 58512836 -13641046 - MIR SINE MIR 0 262 24 339 261 22 11 chr20 58512836 58512928 -13640954 - MER5B DNA MER1_type -85 93 1 312 316 65 58 chr20 58512959 58513114 -13640768 + MIR SINE MIR 86 241 -21 858 242 14 5 chr20 58513378 58513589 -13640293 - MER20 DNA MER1_type 0 219 7 342 247 0 0 chr20 58513711 58513804 -13640078 - L1M4 LINE L1 -1888 4258 4166 421 296 89 28 chr20 58513966 58514145 -13639737 - L1ME4a LINE L1 -136 5985 5796 2105 143 3 0 chr20 58514191 58514492 -13639390 + AluSp SINE Alu 1 302 -11 1297 228 169 5 chr20 58514506 58514815 -13639067 + MLT1J LTR MaLR 72 455 -56 2348 94 0 3 chr20 58514815 58515113 -13638769 + AluSg SINE Alu 1 297 -13 1297 228 169 5 chr20 58515113 58515181 -13638701 + MLT1J LTR MaLR 455 511 0 603 284 14 58 chr20 58515232 58515301 -13638581 - L1ME4a LINE L1 -343 5778 5708 2303 121 0 0 chr20 58515301 58515606 -13638276 - AluSx SINE Alu -7 305 1 603 284 14 58 chr20 58515606 58515814 -13638068 - L1ME4a LINE L1 -413 5708 5513 598 274 20 20 chr20 58515963 58516160 -13637722 - LTR67 LTR ERVL -1 556 360 306 278 66 20 chr20 58516253 58516404 -13637478 - LTR67 LTR ERVL -395 162 5 361 240 19 67 chr20 58516708 58516812 -13637070 + L2 LINE L2 3215 3313 0 1017 266 42 88 chr20 58516867 58517321 -13636561 - L2 LINE L2 -4 3309 2877 188 206 15 73 chr20 58517811 58517879 -13636003 - L2 LINE L2 -72 3200 3137 1939 146 0 38 chr20 58518043 58518359 -13635523 - AluJo SINE Alu -8 304 1 365 279 9 36 chr20 58518905 58519016 -13634866 + MIR SINE MIR 44 151 -111 1850 187 0 0 chr20 58519090 58519400 -13634482 - AluJb SINE Alu -2 310 1 1942 136 28 0 chr20 58519423 58519709 -13634173 - AluSq SINE Alu -19 294 1 1841 128 66 4 chr20 58519709 58519983 -13633899 - AluSx SINE Alu -21 291 1 638 191 36 0 chr20 58570025 58570135 -13583747 + MSTB LTR MaLR 102 215 -211 25 0 0 28 chr20 58570164 58570183 -13583699 + AT_rich Low_complexity Low_complexity 1 20 -15 2457 65 7 3 chr20 58570183 58570475 -13583407 + AluSp SINE Alu 1 293 -20 25 0 0 28 chr20 58570475 58570491 -13583391 + AT_rich Low_complexity Low_complexity 20 35 0 317 270 54 81 chr20 58570506 58570728 -13583154 + HAL1b LINE L1 99 314 -1034 593 181 0 26 chr20 58570781 58570897 -13582985 + FRAM SINE Alu 63 175 -1 465 294 50 38 chr20 58570905 58571167 -13582715 + HAL1b LINE L1 348 612 -736 2423 90 3 3 chr20 58571202 58571514 -13582368 + AluSp SINE Alu 1 312 -1 899 188 19 114 chr20 58572985 58573191 -13580691 + L1MD2 LINE L1 6111 6288 -71 2229 92 7 0 chr20 58573191 58573495 -13580387 - AluSq SINE Alu 0 306 1 899 188 19 114 chr20 58573495 58573558 -13580324 + L1MD2 LINE L1 6288 6355 -4 189 291 64 57 chr20 58574743 58574884 -13578998 - L2 LINE L2 -55 3258 3117 1529 141 7 91 chr20 58575510 58575807 -13578075 + AluJo SINE Alu 21 292 -20 2150 109 20 3 chr20 58576314 58576607 -13577275 + AluSg SINE Alu 1 298 -12 207 125 0 0 chr20 58577780 58577820 -13576062 + (CA)n Simple_repeat Simple_repeat 2 41 0 2400 89 0 0 chr20 58578862 58579165 -13574717 + AluSx SINE Alu 2 304 -8 1919 159 0 35 chr20 58579534 58579849 -13574033 + AluJo SINE Alu 1 304 -8 312 77 0 0 chr20 58579851 58579890 -13573992 + AluSc SINE Alu 1 39 -261 2142 94 0 7 chr20 58579904 58580179 -13573703 + AluSc SINE Alu 24 296 -13 198 0 0 0 chr20 58580340 58580362 -13573520 + (A)n Simple_repeat Simple_repeat 1 22 0 2225 92 3 0 chr20 58580364 58580674 -13573208 + AluSx SINE Alu 1 311 0 2409 91 0 28 chr20 58581786 58582106 -13571776 - AluSx SINE Alu -1 311 1 374 289 64 59 chr20 58582297 58582501 -13571381 - L2 LINE L2 -173 3099 2895 1875 119 6 55 chr20 58582879 58583190 -13570692 + AluSx SINE Alu 1 296 -16 838 134 0 16 chr20 58584157 58584284 -13569598 + AluJb SINE Alu 1 125 -187 25 0 0 0 chr20 58584288 58584313 -13569569 + AT_rich Low_complexity Low_complexity 1 25 0 2327 88 0 3 chr20 58585177 58585474 -13568408 + AluSq SINE Alu 1 296 -17 2456 82 3 3 chr20 58585663 58585968 -13567914 + AluSg SINE Alu 1 305 -5 25 51 0 0 chr20 58586129 58586168 -13567714 + AT_rich Low_complexity Low_complexity 1 39 0 490 290 16 108 chr20 58586661 58586975 -13566907 + L2 LINE L2 2988 3272 0 2252 96 0 39 chr20 58587472 58587784 -13566098 + AluSq SINE Alu 1 300 -13 21 0 0 0 chr20 58588027 58588048 -13565834 + AT_rich Low_complexity Low_complexity 1 21 0 481 254 108 67 chr20 58588570 58588885 -13564997 - MER102a DNA MER1_type -1 329 2 257 246 0 15 chr20 58589150 58589215 -13564667 + MIR SINE MIR 197 260 -2 190 321 36 0 chr20 58589683 58589767 -13564115 - MIR SINE MIR -156 106 20 2367 94 3 0 chr20 58590150 58590448 -13563434 - AluSp SINE Alu -14 299 1 181 83 56 0 chr20 58591877 58591913 -13561969 + (CAA)n Simple_repeat Simple_repeat 2 39 0 2013 136 0 26 chr20 58592979 58593288 -13560594 + AluJo SINE Alu 1 301 -11 205 321 110 0 chr20 58594084 58594193 -13559689 - MIR3 SINE MIR -35 173 53 198 339 46 9 chr20 58594817 58594926 -13558956 - L2 LINE L2 -27 3245 3133 878 141 0 22 chr20 58594947 58595082 -13558800 + FLAM_C SINE Alu 2 133 0 735 142 16 24 chr20 58595888 58596015 -13557867 + FLAM_C SINE Alu 15 140 -3 549 306 78 35 chr20 58599091 58599438 -13554444 + L2 LINE L2 2951 3312 -1 2287 135 100 59 chr20 58600820 58600843 -13553039 + LTR54 LTR ERV1 1 22 -488 1577 156 47 0 chr20 58600843 58601119 -13552763 + AluJo SINE Alu 3 291 -21 2083 93 27 33 chr20 58601120 58601420 -13552462 + AluSq SINE Alu 1 298 -15 2287 135 100 59 chr20 58601420 58601884 -13551998 + LTR54 LTR ERV1 21 510 0 306 207 67 89 chr20 58601891 58602026 -13551856 - MER5A DNA MER1_type -32 157 26 360 264 83 16 chr20 58602215 58602336 -13551546 - MIR SINE MIR -12 250 122 2168 130 0 0 chr20 58602336 58602635 -13551247 + AluSx SINE Alu 1 299 -13 1192 146 0 0 chr20 58602635 58602806 -13551076 + AluJb SINE Alu 134 304 -8 2051 136 0 3 chr20 58602808 58603109 -13550773 + AluSx SINE Alu 1 300 -12 33 0 0 0 chr20 58603112 58603145 -13550737 + AT_rich Low_complexity Low_complexity 1 33 0 2128 122 3 7 chr20 58603156 58603451 -13550431 + AluSx SINE Alu 1 294 -18 241 290 0 0 chr20 58603453 58603515 -13550367 - MIR SINE MIR -74 134 73 554 278 142 0 chr20 58603544 58603756 -13550126 + MIR SINE MIR 21 262 0 405 0 0 0 chr20 58604172 58604217 -13549665 + (TTTTG)n Simple_repeat Simple_repeat 3 47 0 2138 112 0 0 chr20 58604223 58604499 -13549383 - AluSx SINE Alu -36 276 1 1215 214 121 49 chr20 58604605 58605076 -13548806 - MLT1D LTR MaLR 0 505 1 609 268 155 25 chr20 58605174 58605649 -13548233 + L2 LINE L2 2697 3234 -79 323 263 62 86 chr20 58606159 58606402 -13547480 + L2 LINE L2 3013 3249 -64 2261 106 0 13 chr20 58606763 58607064 -13546818 - AluSx SINE Alu -15 297 1 188 278 69 0 chr20 58607091 58607163 -13546719 - MIR SINE MIR -82 180 104 1179 247 82 21 chr20 58607312 58607689 -13546193 - MLT1K LTR MaLR -1 587 188 441 240 13 97 chr20 58607692 58607846 -13546036 - MIR SINE MIR -121 141 1 227 217 0 0 chr20 58607870 58607916 -13545966 + (TAA)n Simple_repeat Simple_repeat 1 46 0 480 233 92 0 chr20 58607922 58608042 -13545840 - MIR SINE MIR -84 178 48 288 270 184 26 chr20 58608602 58608754 -13545128 + MIR SINE MIR 84 259 -3 640 146 73 161 chr20 58608882 58608983 -13544899 + MER45A DNA AcHobo 4 112 -1469 2208 93 0 24 chr20 58608983 58609311 -13544571 - AluSx SINE Alu 0 321 1 640 146 73 161 chr20 58609311 58609327 -13544555 + MER45A DNA AcHobo 112 128 -1453 2235 112 0 0 chr20 58609327 58609622 -13544260 - AluSx SINE Alu -17 295 1 640 146 73 161 chr20 58609622 58609694 -13544188 + MER45A DNA AcHobo 128 178 0 517 251 23 29 chr20 58609889 58610060 -13543822 - MIR SINE MIR -11 251 82 938 245 86 93 chr20 58610846 58611070 -13542812 + MLT1J LTR MaLR 13 234 -277 2421 92 0 0 chr20 58611070 58611374 -13542508 - AluSc SINE Alu -5 304 1 938 245 86 93 chr20 58611374 58611577 -13542305 + MLT1J LTR MaLR 234 437 -74 2137 117 21 0 chr20 58611663 58611954 -13541928 + AluSg SINE Alu 1 297 -13 230 279 25 13 chr20 58611956 58612035 -13541847 + MLT1J LTR MaLR 432 511 0 264 185 0 77 chr20 58612384 58612449 -13541433 + MLT1L LTR MaLR 1 60 -555 304 235 52 38 chr20 58612482 58612587 -13541295 + MLT1L LTR MaLR 116 286 -310 2366 87 0 10 chr20 58612599 58612909 -13540973 + AluY SINE Alu 1 307 -4 630 258 75 5 chr20 58612945 58613131 -13540751 + MLT1L LTR MaLR 417 615 0 254 291 0 23 chr20 58613450 58613536 -13540346 + L2 LINE L2 3185 3268 -4 192 40 0 0 chr20 58613641 58613666 -13540216 + (GA)n Simple_repeat Simple_repeat 2 26 0 2391 87 3 0 chr20 58614047 58614345 -13539537 - AluSp SINE Alu -14 299 1 2493 61 0 13 chr20 58614405 58614716 -13539166 - AluY SINE Alu -4 307 1 1910 102 26 4 chr20 58614862 58615128 -13538754 - AluSx SINE Alu -7 305 34 288 242 61 0 chr20 58615283 58615349 -13538533 + MLT1L LTR MaLR 546 615 0 548 204 9 9 chr20 58615505 58615613 -13538269 + LTR16C LTR ERVL 382 489 -2 1320 196 18 61 chr20 58616139 58616465 -13537417 - L1ME3A LINE L1 -5 6165 5854 623 245 101 5 chr20 58616578 58616766 -13537116 + MIR SINE MIR 28 233 -29 323 273 65 98 chr20 58616954 58617137 -13536745 - MIR SINE MIR -59 203 15 2447 87 0 3 chr20 58617469 58617781 -13536101 + AluSq SINE Alu 1 311 -2 673 287 89 58 chr20 58617954 58618313 -13535569 - MLT1L LTR MaLR 0 615 239 2004 142 3 32 chr20 58618313 58618623 -13535259 - AluJb SINE Alu -11 301 1 673 287 89 58 chr20 58618623 58618691 -13535191 - MLT1L LTR MaLR -376 239 175 877 197 19 66 chr20 58618696 58618909 -13534973 + MER20 DNA MER1_type 17 219 0 1566 138 0 0 chr20 58619308 58619532 -13534350 - AluSg/x SINE Alu -5 305 82 441 202 52 59 chr20 58619540 58619703 -13534179 + MLT1H1 LTR MaLR 18 190 -405 443 136 84 155 chr20 58619722 58619828 -13534054 + MLT1F1 LTR MaLR 419 512 -55 2552 52 7 3 chr20 58619828 58620133 -13533749 - AluY SINE Alu -5 306 1 443 136 84 155 chr20 58620133 58620181 -13533701 + MLT1F1 LTR MaLR 512 562 -5 271 143 20 0 chr20 58620244 58620293 -13533589 - MSTB LTR MaLR 0 432 383 * 366 78 0 0 chr20 58620280 58620331 -13533551 + AluJb SINE Alu 85 135 -167 1848 142 9 44 chr20 58620331 58620647 -13533235 + AluSx SINE Alu 1 305 -7 1768 141 133 20 chr20 58620647 58620994 -13532888 - MSTB LTR MaLR -30 396 11 31 44 0 0 chr20 58621003 58621048 -13532834 + AT_rich Low_complexity Low_complexity 1 45 0 2545 159 24 47 chr20 58621267 58621775 -13532107 + MLT1D LTR MaLR 6 501 -4 490 340 13 0 chr20 58621780 58621939 -13531943 - MIR SINE MIR -41 221 61 2114 120 0 40 chr20 58622170 58622495 -13531387 - AluSx SINE Alu 0 312 1 2457 100 0 0 chr20 58623067 58623376 -13530506 - AluSx SINE Alu -1 311 3 1767 220 18 78 chr20 58623542 58623595 -13530287 - L1ME1 LINE L1 -12 6154 6099 1924 145 30 20 chr20 58623595 58623899 -13529983 - AluJo SINE Alu -5 307 1 1767 220 18 78 chr20 58623899 58624197 -13529685 - L1ME1 LINE L1 -67 6099 5847 2149 124 3 0 chr20 58624197 58624488 -13529394 + AluSq SINE Alu 3 294 -19 1767 220 18 78 chr20 58624488 58624699 -13529183 - L1ME1 LINE L1 -319 5847 5625 279 0 0 0 chr20 58624704 58624735 -13529147 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 854 165 0 0 chr20 58624735 58624856 -13529026 - FLAM_C SINE Alu -22 121 1 284 188 12 118 chr20 58624857 58624942 -13528940 - L1ME1 LINE L1 -537 5629 5554 741 142 0 0 chr20 58624946 58625183 -13528699 + AluSg/x SINE Alu 177 413 0 437 214 26 52 chr20 58625186 58625316 -13528566 - L1ME1 LINE L1 -598 5568 5445 2182 88 51 3 chr20 58625333 58625628 -13528254 + AluSp SINE Alu 1 309 -4 318 295 26 0 chr20 58625737 58625848 -13528034 + L2 LINE L2 2922 3035 -237 1332 131 48 0 chr20 58625912 58626118 -13527764 + MER20 DNA MER1_type 1 216 -3 298 337 209 6 chr20 58626187 58626350 -13527532 + L2 LINE L2 3076 3271 -1 242 284 0 30 chr20 58626465 58626532 -13527350 + GA-rich Low_complexity Low_complexity 2 66 0 312 309 89 16 chr20 58626535 58626658 -13527224 + MIR SINE MIR 21 152 -110 330 285 99 67 chr20 58626820 58627104 -13526778 + LTR16C LTR ERVL 49 341 -150 2198 105 44 0 chr20 58627105 58627400 -13526482 - AluSx SINE Alu -4 308 1 293 146 18 18 chr20 58627527 58627582 -13526300 + LTR16C LTR ERVL 188 242 -249 2472 121 70 2 chr20 58627585 58627997 -13525885 - LTR47A LTR ERVL 0 452 13 709 281 113 0 chr20 58628000 58628221 -13525661 + LTR16C LTR ERVL 246 491 0 2194 93 4 0 chr20 58628985 58629290 -13524592 + AluSx SINE Alu 1 306 0 348 218 143 41 chr20 58629467 58629614 -13524268 + LTR33 LTR ERVL 190 351 -170 2317 102 6 22 chr20 58629785 58630100 -13523782 - AluSg SINE Alu 0 310 1 2224 117 13 0 chr20 58630125 58630433 -13523449 - AluSx SINE Alu 0 312 1 450 277 8 31 chr20 58630903 58631033 -13522849 - MIR SINE MIR -69 193 67 4053 127 25 86 chr20 58631036 58631297 -13522585 + LTR1 LTR ERV1 1 276 -509 1971 93 37 93 chr20 58631297 58631619 -13522263 + AluSx SINE Alu 1 304 -8 4053 127 25 86 chr20 58631619 58632193 -13521689 + LTR1 LTR ERV1 276 785 0 312 137 20 0 chr20 58632368 58632419 -13521463 - Charlie8 DNA MER1_type -989 1428 1377 2336 96 3 19 chr20 58632455 58632768 -13521114 - AluSp SINE Alu -1 312 5 285 219 49 12 chr20 58632786 58632861 -13521021 - Charlie8 DNA MER1_type -1989 428 351 515 304 79 29 chr20 58632861 58633101 -13520781 - MLT1J LTR MaLR -3 508 257 534 180 8 55 chr20 58633181 58633309 -13520573 - MER20 DNA MER1_type -17 202 81 225 269 108 23 chr20 58633402 58633532 -13520350 - MLT1J LTR MaLR -370 141 1 293 297 43 7 chr20 58633534 58633672 -13520210 - Charlie8 DNA MER1_type -2059 358 216 2326 100 0 0 chr20 58633977 58634266 -13519616 - AluSx SINE Alu -13 299 11 1018 85 16 0 chr20 58634278 58634407 -13519475 - FLAM_C SINE Alu -2 131 1 1779 119 0 0 chr20 58635113 58635348 -13518534 - AluSx SINE Alu -77 235 1 547 194 34 74 chr20 58635574 58635636 -13518246 - L1ME2 LINE L1 -189 5973 5910 2276 89 0 0 chr20 58635636 58635945 -13517937 + AluY SINE Alu 1 309 0 547 194 34 74 chr20 58635945 58636078 -13517804 - L1ME2 LINE L1 -252 5910 5781 338 243 0 14 chr20 58636173 58636247 -13517635 - L1MC4 LINE L1 -1338 6704 6632 457 122 40 0 chr20 58636267 58636341 -13517541 - L1ME2 LINE L1 -391 5771 5695 2157 114 7 0 chr20 58636341 58636673 -13517209 - AluSx SINE Alu 0 335 2 665 290 168 42 chr20 58636771 58637347 -13516535 + L2 LINE L2 2308 2956 -358 438 246 159 107 chr20 58637467 58637722 -13516160 - L1MC4 LINE L1 -2144 5664 5385 2122 102 35 0 chr20 58637722 58638006 -13515876 - AluSp SINE Alu -19 294 1 438 246 159 107 chr20 58638006 58638096 -13515786 - L1MC4 LINE L1 -2423 5385 5301 2075 142 3 0 chr20 58638097 58638392 -13515490 - AluJb SINE Alu -16 296 1 508 271 0 16 chr20 58638398 58638527 -13515355 + L2 LINE L2 3162 3288 -25 2403 96 3 0 chr20 58638554 58638855 -13515027 - AluSq SINE Alu -11 302 1 1613 218 11 16 chr20 58639006 58639378 -13514504 + L1MC/D LINE L1 5315 5684 -2124 397 261 9 43 chr20 58639403 58639518 -13514364 + L2 LINE L2 3174 3284 -29 485 246 29 7 chr20 58639556 58639694 -13514188 + MLT1J2 LTR MaLR 67 207 -243 1233 163 131 145 chr20 58639736 58640264 -13513618 + MER66A LTR ERV1 100 468 -10 344 218 69 23 chr20 58640311 58640398 -13513484 + MLT1I LTR MaLR 315 405 -4 251 86 0 0 chr20 58640405 58640440 -13513442 + L2 LINE L2 3276 3310 -3 235 149 35 149 chr20 58640492 58640547 -13513335 - L1ME LINE L1 -513 5608 5565 1962 158 0 28 chr20 58640547 58640864 -13513018 - AluJo SINE Alu -4 308 1 235 149 35 149 chr20 58640864 58640895 -13512987 - L1ME LINE L1 -556 5565 5532 823 273 10 1 chr20 58640899 58641118 -13512764 - MIR SINE MIR 0 262 43 187 304 120 24 chr20 58641089 58641214 -13512668 + MER5B DNA MER1_type 39 175 -3 * 950 162 0 0 chr20 58641254 58641396 -13512486 - FLAM_C SINE Alu -1 142 1 1711 175 16 22 chr20 58641545 58641859 -13512023 + AluJo SINE Alu 1 312 0 836 141 35 0 chr20 58641862 58642032 -13511850 + GA-rich Low_complexity Low_complexity 3 178 0 255 225 79 34 chr20 58642186 58642275 -13511607 - MLT1J LTR MaLR -133 378 286 659 211 78 12 chr20 58642295 58642461 -13511421 - MLT1J LTR MaLR -333 178 2 478 362 16 0 chr20 58643054 58643239 -13510643 + MLT1K LTR MaLR 2 189 -399 2236 115 0 7 chr20 58643284 58643588 -13510294 - AluSx SINE Alu -10 302 1 678 254 43 38 chr20 58643673 58643750 -13510132 - L2 LINE L2 0 3313 3238 225 0 0 0 chr20 58643750 58643775 -13510107 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 678 254 43 38 chr20 58643775 58643906 -13509976 - L2 LINE L2 -75 3238 3104 2120 141 0 3 chr20 58643913 58644225 -13509657 + AluSx SINE Alu 1 311 -1 718 130 0 0 chr20 58644287 58644387 -13509495 - AluS SINE Alu -212 101 2 1993 127 3 17 chr20 58644392 58644705 -13509177 - AluSx SINE Alu 0 309 1 2415 105 0 0 chr20 58644707 58645012 -13508870 - AluSg SINE Alu -5 305 1 425 254 122 107 chr20 58645050 58645369 -13508513 - MLT1I LTR MaLR 0 409 86 1007 259 98 15 chr20 58645435 58645771 -13508111 + MER113 DNA MER1_type? 154 517 -4 370 336 50 0 chr20 58645934 58646074 -13507808 - MIR SINE MIR -66 196 50 352 231 231 21 chr20 58646301 58646444 -13507438 - MIR SINE MIR -43 219 47 2004 116 0 38 chr20 58646721 58647042 -13506840 - AluSx SINE Alu 0 310 1 1026 184 0 0 chr20 58647075 58647238 -13506644 + AluJo SINE Alu 120 282 -30 297 214 0 68 chr20 58647247 58647258 -13506624 - L1ME4a LINE L1 -62 6059 6049 1743 175 3 63 chr20 58647258 58647589 -13506293 + AluJo SINE Alu 1 311 -1 297 214 0 68 chr20 58647589 58647680 -13506202 - L1ME4a LINE L1 -72 6049 5964 990 313 66 37 chr20 58647895 58648594 -13505288 - L1MC4a LINE L1 -1836 5972 5254 1430 171 119 0 chr20 58648651 58648903 -13504979 + AluJb SINE Alu 1 282 -30 432 0 0 0 chr20 58648923 58648971 -13504911 + (CA)n Simple_repeat Simple_repeat 1 48 0 552 288 38 28 chr20 58649245 58649457 -13504425 - MIR SINE MIR -12 250 37 838 201 34 0 chr20 58649885 58650064 -13503818 - MER20 DNA MER1_type -34 185 1 764 239 6 0 chr20 58650170 58650329 -13503553 - MIR SINE MIR -90 172 13 713 262 145 47 chr20 58650363 58650791 -13503091 - Charlie8 DNA MER1_type -1946 471 2 209 276 20 20 chr20 58650858 58650956 -13502926 + (TTCA)n Simple_repeat Simple_repeat 3 100 0 1039 125 12 9 chr20 58650959 58651461 -13502421 + (TCCA)n Simple_repeat Simple_repeat 1 686 0 204 40 0 0 chr20 58651550 58651575 -13502307 + (TG)n Simple_repeat Simple_repeat 2 26 0 1692 177 4 0 chr20 58651581 58651846 -13502036 - AluJb SINE Alu -46 266 1 518 255 9 0 chr20 58651855 58651961 -13501921 + MIR SINE MIR 54 160 -102 2490 48 10 3 chr20 58652041 58652334 -13501548 - AluY SINE Alu -14 297 3 423 0 0 0 chr20 58652860 58652907 -13500975 + (TG)n Simple_repeat Simple_repeat 2 48 0 1771 182 16 24 chr20 58652961 58653330 -13500552 + MER47A DNA MER2_type 1 366 0 664 254 166 0 chr20 58653457 58653638 -13500244 - MIR SINE MIR -4 258 48 356 273 81 56 chr20 58653689 58653887 -13499995 - L2 LINE L2 -140 3132 2930 221 305 105 9 chr20 58654134 58654239 -13499643 + L2 LINE L2 3159 3273 -40 972 141 0 0 chr20 58654996 58655138 -13498744 + FRAM SINE Alu 22 163 -13 2200 138 0 0 chr20 58655139 58655444 -13498438 + AluSq SINE Alu 1 305 -8 2266 129 0 0 chr20 58655783 58656085 -13497797 + AluSx SINE Alu 1 302 -10 767 260 67 79 chr20 58656430 58656908 -13496974 - L2 LINE L2 -47 3266 2793 590 222 17 0 chr20 58656921 58657038 -13496844 - MIR SINE MIR -127 135 17 435 194 0 0 chr20 58657113 58657206 -13496676 + (TG)n Simple_repeat Simple_repeat 2 94 0 881 249 35 11 chr20 58657218 58657479 -13496403 - L1ME3A LINE L1 -35 6135 5869 2248 119 6 3 chr20 58657878 58658189 -13495693 + AluSx SINE Alu 1 312 0 1792 182 0 25 chr20 58658341 58658371 -13495511 - AluJb SINE Alu -2 310 281 861 73 15 15 chr20 58658371 58658507 -13495375 + (TTCC)n Simple_repeat Simple_repeat 3 138 0 1792 182 0 25 chr20 58658507 58658794 -13495088 - AluJb SINE Alu -31 281 1 239 278 14 14 chr20 58659024 58659096 -13494786 + MIR SINE MIR 14 85 -177 921 198 68 81 chr20 58659111 58659434 -13494448 - MLT1G LTR MaLR -18 572 254 1222 124 0 0 chr20 58659434 58659612 -13494270 + L1MB7 LINE L1 5995 6172 -12 833 118 110 0 chr20 58659717 58659853 -13494029 + FRAM SINE Alu 21 171 -5 465 194 194 18 chr20 58659858 58660023 -13493859 + MIR SINE MIR 66 259 -3 579 255 130 73 chr20 58660049 58660296 -13493586 + MIR SINE MIR 2 262 0 340 250 75 17 chr20 58660917 58661037 -13492845 - MIR SINE MIR -78 184 58 557 264 201 53 chr20 58661056 58661147 -13492735 - L2 LINE L2 -2 3311 3235 1965 137 32 0 chr20 58661147 58661431 -13492451 + AluSx SINE Alu 1 293 -19 557 264 201 53 chr20 58661431 58661736 -13492146 - L2 LINE L2 -78 3235 2856 2198 141 0 0 chr20 58661771 58662077 -13491805 + AluSx SINE Alu 1 306 -6 2507 86 0 0 chr20 58662077 58662381 -13491501 + AluSp SINE Alu 1 304 -9 1516 229 85 37 chr20 58662392 58663126 -13490756 + L2 LINE L2 2529 3312 -1 519 260 29 23 chr20 58663182 58663355 -13490527 - Charlie8 DNA MER1_type -2152 265 92 218 220 198 11 chr20 58663852 58663943 -13489939 - MER91C DNA MER1_type 0 140 33 1876 166 17 26 chr20 58663954 58664150 -13489732 - MER7A DNA MER2_type -2693 345 154 3805 102 19 6 chr20 58664150 58664670 -13489212 - MER1A DNA MER1_type 0 527 1 1876 166 17 26 chr20 58664670 58664823 -13489059 - MER7A DNA MER2_type -2884 154 1 1651 177 11 76 chr20 58665088 58665372 -13488510 + MER2 DNA MER2_type 1 302 -42 2195 108 14 3 chr20 58665372 58665668 -13488214 - AluSx SINE Alu -13 299 1 1822 79 135 22 chr20 58665675 58665942 -13487940 - AluSg SINE Alu -12 298 2 1651 177 11 76 chr20 58665942 58666017 -13487865 + MER2 DNA MER2_type 308 344 0 312 120 0 0 chr20 58666018 58666068 -13487814 + (CA)n Simple_repeat Simple_repeat 2 51 0 1004 243 37 8 chr20 58666136 58666206 -13487676 + MER58B DNA MER1_type 4 71 -2349 2149 130 3 0 chr20 58666206 58666506 -13487376 - AluSq SINE Alu -12 301 1 1004 243 37 8 chr20 58666506 58666547 -13487335 + MER58B DNA MER1_type 71 109 -2311 1964 158 0 3 chr20 58666547 58666844 -13487038 + AluJb SINE Alu 1 296 -16 2289 123 0 3 chr20 58666848 58667157 -13486725 + AluSx SINE Alu 1 308 -4 1004 243 37 8 chr20 58667157 58667362 -13486520 + MER58B DNA MER1_type 111 335 -6 305 320 58 39 chr20 58667380 58667536 -13486346 - L1MC4a LINE L1 -1905 5903 5745 2125 139 7 0 chr20 58668085 58668386 -13485496 - AluSx SINE Alu -9 303 1 23 54 0 0 chr20 58668406 58668443 -13485439 + AT_rich Low_complexity Low_complexity 1 37 0 1033 251 114 34 chr20 58668531 58668969 -13484913 + MLT1L LTR MaLR 6 478 -137 422 332 75 35 chr20 58669087 58669313 -13484569 + MIR SINE MIR 7 241 -21 181 319 92 61 chr20 58669452 58669681 -13484201 + L3 LINE CR1 900 1135 -442 199 320 214 10 chr20 58669844 58669947 -13483935 + MIR3 SINE MIR 14 137 -71 1402 138 0 0 chr20 58670103 58670299 -13483583 - AluSx SINE Alu -116 196 1 1463 230 137 39 chr20 58670388 58670922 -13482960 - MLT1K LTR MaLR 0 588 3 296 308 42 0 chr20 58671482 58671602 -13482280 - Charlie8 DNA MER1_type -2144 273 149 1965 125 38 3 chr20 58671609 58671898 -13481984 - AluSx SINE Alu -13 299 1 2847 70 3 23 chr20 58671930 58672019 -13481863 - MER41A LTR ERV1 -85 469 380 2299 101 3 3 chr20 58672019 58672317 -13481565 - AluSp SINE Alu -15 298 1 2847 70 3 23 chr20 58672317 58672612 -13481270 - MER41A LTR ERV1 -174 380 93 2374 60 0 7 chr20 58672614 58672923 -13480959 - AluY SINE Alu 0 307 1 2142 164 39 3 chr20 58672923 58673306 -13480576 - L1MC1 LINE L1 -5 6328 5932 313 314 25 8 chr20 58673426 58673544 -13480338 - Charlie8 DNA MER1_type -2295 122 3 426 152 0 111 chr20 58673549 58673648 -13480234 + MIR SINE MIR 34 121 -87 528 226 9 0 chr20 58673994 58674100 -13479782 + MIR SINE MIR 16 122 -140 209 280 67 0 chr20 58674091 58674166 -13479716 + MER91C DNA MER1_type 31 110 -30 * 292 273 0 0 chr20 58674218 58674284 -13479598 + MIR SINE MIR 176 241 -21 350 232 0 0 chr20 58674389 58674458 -13479424 - MIR SINE MIR -127 135 67 197 194 60 30 chr20 58674978 58675045 -13478837 + L2 LINE L2 3026 3094 -219 728 160 83 77 chr20 58675080 58675261 -13478621 - AluSg/x SINE Alu -13 299 118 281 176 0 0 chr20 58675358 58675409 -13478473 - MIR SINE MIR -139 123 73 495 172 0 23 chr20 58675480 58675567 -13478315 + L2 LINE L2 3229 3313 0 346 359 35 30 chr20 58675681 58675752 -13478130 + L2 LINE L2 2914 2983 -289 884 177 121 5 chr20 58675752 58675950 -13477932 + MER58A DNA MER1_type 1 221 -3 346 359 35 30 chr20 58675950 58676076 -13477806 + L2 LINE L2 2983 3112 -160 871 80 0 9 chr20 58676244 58676357 -13477525 + AluSq/x SINE Alu 5 116 -197 342 0 0 0 chr20 58676359 58676397 -13477485 + (CA)n Simple_repeat Simple_repeat 1 38 0 183 80 0 0 chr20 58676929 58676954 -13476928 + (TG)n Simple_repeat Simple_repeat 2 26 0 318 233 175 0 chr20 58677090 58677193 -13476689 + L2 LINE L2 3136 3256 -16 517 291 13 0 chr20 58677255 58677406 -13476476 + L2 LINE L2 2925 3077 -195 950 281 126 17 chr20 58677474 58677975 -13475907 - L2 LINE L2 -9 3304 2736 2112 90 63 0 chr20 58677980 58678290 -13475592 - AluSx SINE Alu 0 327 1 2405 108 0 0 chr20 58678297 58678603 -13475279 - AluSx SINE Alu -6 306 1 1463 251 48 9 chr20 58678787 58679226 -13474656 - LTR16C LTR ERVL -1 490 35 518 263 11 59 chr20 58680006 58680125 -13473757 - MER20 DNA MER1_type -42 177 69 2444 80 10 6 chr20 58680125 58680436 -13473446 + AluSx SINE Alu 1 312 0 518 263 11 59 chr20 58680436 58680502 -13473380 - MER20 DNA MER1_type -150 69 1 293 238 56 56 chr20 58680655 58680781 -13473101 + MIR SINE MIR 61 186 -76 254 283 38 47 chr20 58680800 58680906 -13472976 - MIR SINE MIR 0 262 158 323 185 62 15 chr20 58680979 58681044 -13472838 - MLT1J LTR MaLR -238 273 206 2067 137 22 6 chr20 58681054 58681367 -13472515 + 7SLRNA srpRNA srpRNA 1 318 -2 691 168 92 0 chr20 58681375 58681494 -13472388 + FLAM_C SINE Alu 1 130 -3 2066 128 14 7 chr20 58681519 58681809 -13472073 + AluSc SINE Alu 1 292 -17 240 35 0 0 chr20 58681819 58681848 -13472034 + (TAAAA)n Simple_repeat Simple_repeat 4 32 0 747 237 70 0 chr20 58681851 58682037 -13471845 - MLT1J LTR MaLR -312 199 1 338 214 14 0 chr20 58682039 58682109 -13471773 - MIR SINE MIR -119 143 73 337 241 0 0 chr20 58682451 58682530 -13471352 - MIR SINE MIR -79 129 51 304 284 163 39 chr20 58682570 58682901 -13470981 - HAL1 LINE L1 -1618 889 518 244 245 142 39 chr20 58683104 58683259 -13470623 - HAL1 LINE L1 -2297 210 40 419 314 111 30 chr20 58683271 58683542 -13470340 + MLT1L LTR MaLR 8 300 -315 847 146 0 53 chr20 58683542 58683693 -13470189 + FLAM_C SINE Alu 1 143 0 192 40 0 0 chr20 58683728 58683753 -13470129 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 2261 83 3 10 chr20 58683753 58684035 -13469847 - AluSx SINE Alu -32 280 1 632 318 50 7 chr20 58684068 58684351 -13469531 + MLT1L LTR MaLR 321 615 0 561 273 5 48 chr20 58684699 58684897 -13468985 - MIR SINE MIR -1 261 74 545 239 166 24 chr20 58685115 58685362 -13468520 - MLT1L LTR MaLR -333 282 1 337 277 213 26 chr20 58685364 58685442 -13468440 - MIR SINE MIR -6 256 194 1472 157 14 68 chr20 58685442 58685735 -13468147 - AluJo SINE Alu -10 302 26 337 277 213 26 chr20 58685735 58685811 -13468071 - MIR SINE MIR -68 194 73 404 83 0 28 chr20 58685827 58685899 -13467983 - MER53 DNA DNA 0 189 120 905 266 101 53 chr20 58685924 58686391 -13467491 - Charlie8 DNA MER1_type -1915 502 14 286 304 186 34 chr20 58686492 58686696 -13467186 + MIR SINE MIR 14 248 -14 237 321 12 12 chr20 58686764 58686848 -13467034 + CT-rich Low_complexity Low_complexity 3 86 0 308 328 51 14 chr20 58686856 58686999 -13466883 + MIR3 SINE MIR 11 159 -49 2031 135 0 0 chr20 58687354 58687676 -13466206 - AluSx SINE Alu 0 322 1 603 320 83 72 chr20 58687692 58688151 -13465731 + L2 LINE L2 2809 3272 0 466 276 101 64 chr20 58688223 58688564 -13465318 + L2 LINE L2 2706 3061 -252 934 245 38 66 chr20 58688653 58689045 -13464837 + MLT1J LTR MaLR 71 451 -60 2238 132 0 0 chr20 58689166 58689517 -13464365 - AluSx SINE Alu 0 351 1 285 310 20 0 chr20 58689589 58689689 -13464193 - MIR SINE MIR -77 131 30 306 277 25 42 chr20 58689847 58689966 -13463916 + MIR SINE MIR 19 135 -73 247 331 40 32 chr20 58690123 58690247 -13463635 + MIR SINE MIR 23 147 -115 457 327 133 0 chr20 58690258 58690536 -13463346 - L2 LINE L2 -1 3312 2998 310 268 0 21 chr20 58690693 58690790 -13463092 + L2 LINE L2 2590 2684 -630 1827 204 89 40 chr20 58690800 58691271 -13462611 - MLT1D LTR MaLR -9 496 3 813 250 93 0 chr20 58691272 58691540 -13462342 + L2 LINE L2 2681 2973 -341 2549 68 3 0 chr20 58691550 58691857 -13462025 - AluSg SINE Alu -2 308 1 475 213 41 12 chr20 58691859 58692028 -13461854 + CT-rich Low_complexity Low_complexity 3 176 0 2166 93 0 0 chr20 58692083 58692342 -13461540 - AluSx SINE Alu -47 265 7 589 290 140 37 chr20 58692342 58692670 -13461212 + L2 LINE L2 2948 3309 -4 398 225 0 0 chr20 58692936 58693016 -13460866 + MIR SINE MIR 90 169 -93 356 180 0 0 chr20 58693025 58693086 -13460796 + MIR SINE MIR 109 169 -93 1000 222 29 5 chr20 58693090 58693297 -13460585 - MER20 DNA MER1_type -6 213 2 773 239 17 6 chr20 58693394 58693570 -13460312 + MIR SINE MIR 60 237 -25 295 243 89 134 chr20 58694104 58694351 -13459531 - MIR SINE MIR -13 249 14 401 246 6 0 chr20 58694484 58694655 -13459227 + CT-rich Low_complexity Low_complexity 1 172 0 364 352 166 0 chr20 58695540 58695739 -13458143 + MIR SINE MIR 15 246 -16 1939 146 0 38 chr20 58696249 58696565 -13457317 + AluJo SINE Alu 1 304 -8 188 206 15 73 chr20 58696729 58696797 -13457085 + L2 LINE L2 3137 3200 -72 1017 266 42 88 chr20 58697287 58697741 -13456141 + L2 LINE L2 2877 3309 -4 361 240 19 67 chr20 58697796 58697900 -13455982 - L2 LINE L2 0 3313 3215 306 278 66 20 chr20 58698204 58698355 -13455527 + LTR67 LTR ERVL 5 162 -395 598 274 20 20 chr20 58698448 58698645 -13455237 + LTR67 LTR ERVL 360 556 -1 603 284 14 58 chr20 58698794 58699002 -13454880 + L1ME4a LINE L1 5513 5708 -413 2303 121 0 0 chr20 58699002 58699307 -13454575 + AluSx SINE Alu 1 305 -7 603 284 14 58 chr20 58699307 58699376 -13454506 + L1ME4a LINE L1 5708 5778 -343 1297 228 169 5 chr20 58699427 58699495 -13454387 - MLT1J LTR MaLR 0 511 455 2348 94 0 3 chr20 58699495 58699793 -13454089 - AluSg SINE Alu -13 297 1 1297 228 169 5 chr20 58699793 58700102 -13453780 - MLT1J LTR MaLR -56 455 72 2105 143 3 0 chr20 58700116 58700417 -13453465 - AluSp SINE Alu -11 302 1 406 279 106 45 chr20 58700463 58700642 -13453240 + L1ME4a LINE L1 5796 5985 -136 335 247 0 0 chr20 58700804 58700897 -13452985 + L1M4 LINE L1 4166 4258 -1888 806 209 16 6 chr20 58701048 58701230 -13452652 + MER20 DNA MER1_type 36 219 0 208 308 128 0 chr20 58701494 58701572 -13452310 - MIR SINE MIR -21 241 154 823 195 32 0 chr20 58701578 58701732 -13452150 - MSTB LTR MaLR -267 159 1 2394 87 0 0 chr20 58704972 58705261 -13448621 - AluSg SINE Alu -19 291 3 1836 160 7 17 chr20 58705282 58705575 -13448307 - AluJb SINE Alu -22 290 1 331 283 44 0 chr20 58705755 58705868 -13448014 - LTR16C LTR ERVL -150 341 224 1785 118 32 4 chr20 58705876 58706122 -13447760 + AluSx SINE Alu 35 287 -25 34 0 0 0 chr20 58706237 58706271 -13447611 + AT_rich Low_complexity Low_complexity 1 34 0 667 188 0 0 chr20 58706273 58706374 -13447508 - AluJ/FLAM SINE Alu -210 102 2 1726 146 0 78 chr20 58706853 58707188 -13446694 + AluJo SINE Alu 1 309 -3 378 272 96 16 chr20 58707287 58707412 -13446470 + L2 LINE L2 3138 3272 0 2468 62 14 0 chr20 58708493 58708781 -13445101 - AluSg SINE Alu -18 292 1 1538 176 86 11 chr20 58709546 58709825 -13444057 - AluJo SINE Alu -12 300 1 2093 131 0 7 chr20 58709832 58710137 -13443745 - AluSx SINE Alu -9 303 1 22 0 0 0 chr20 58710943 58710965 -13442917 + AT_rich Low_complexity Low_complexity 1 22 0 243 221 59 15 chr20 58711796 58711864 -13442018 - L2 LINE L2 0 3313 3243 22 0 0 0 chr20 58712229 58712251 -13441631 + AT_rich Low_complexity Low_complexity 1 22 0 484 298 30 6 chr20 58713477 58713645 -13440237 + L2 LINE L2 2531 2702 -612 830 169 0 42 chr20 58713666 58713808 -13440074 + FLAM_C SINE Alu 1 136 -7 1105 273 137 22 chr20 58713848 58714302 -13439580 + L2 LINE L2 2805 3310 -3 448 318 26 7 chr20 58714415 58714569 -13439313 + L1MEc LINE L1 274 430 -5966 727 218 115 40 chr20 58714715 58715063 -13438819 + L1MEc LINE L1 801 1174 -5222 341 364 0 0 chr20 58715122 58715221 -13438661 + L1MEc LINE L1 1287 1385 -5011 1345 189 60 23 chr20 58715232 58715497 -13438385 + AluJo SINE Alu 1 275 -37 252 0 0 0 chr20 58715500 58715528 -13438354 + (TC)n Simple_repeat Simple_repeat 1 28 0 986 234 127 37 chr20 58715529 58716472 -13437410 + L1MEc LINE L1 1633 3489 -2726 644 196 38 64 chr20 58716469 58716692 -13437190 + L1ME1 LINE L1 5957 6184 0 * 1623 174 3 44 chr20 58717285 58717601 -13436281 - AluJo SINE Alu -1 311 9 1643 130 42 0 chr20 58717792 58718030 -13435852 + AluSp SINE Alu 1 248 -65 524 184 0 0 chr20 58718054 58718152 -13435730 - Charlie5 DNA MER1_type -28 2584 2487 232 163 0 0 chr20 58718152 58718201 -13435681 + AluSp SINE Alu 253 301 -2 1068 153 0 48 chr20 58718348 58718537 -13435345 - AluJ SINE Alu -11 301 122 309 199 172 0 chr20 58718625 58718776 -13435106 - HAL1 LINE L1 -304 2203 2027 2052 129 3 68 chr20 58718777 58719117 -13434765 - 7SLRNA srpRNA srpRNA -1 319 2 733 204 0 0 chr20 58719118 58719250 -13434632 - AluJ SINE Alu -176 136 5 1095 192 113 21 chr20 58719357 58719648 -13434234 - MER33 DNA MER1_type -1 323 6 360 235 187 42 chr20 58719655 58719821 -13434061 - HAL1 LINE L1 -581 1926 1737 2486 276 161 31 chr20 58719895 58720150 -13433732 - HAL1 LINE L1 -622 1885 1665 2013 78 16 4 chr20 58720150 58720405 -13433477 - AluSq SINE Alu -9 304 47 2486 276 161 31 chr20 58720405 58721712 -13432170 - HAL1 LINE L1 -842 1665 119 574 129 10 0 chr20 58721741 58721842 -13432040 - L1MB3 LINE L1 0 6183 6082 22 70 0 0 chr20 58721846 58721889 -13431993 + AT_rich Low_complexity Low_complexity 1 43 0 233 214 97 62 chr20 58723568 58723722 -13430160 + MIR SINE MIR 44 253 -9 729 82 0 0 chr20 58724128 58724226 -13429656 + HY3 scRNA scRNA 1 98 -3 241 269 142 60 chr20 58724473 58724607 -13429275 - MIR SINE MIR -37 225 81 2157 112 0 10 chr20 58725429 58725724 -13428158 + AluSx SINE Alu 1 292 -20 2339 112 3 0 chr20 58728265 58728569 -13425313 + AluSx SINE Alu 1 305 -7 478 301 40 6 chr20 58728914 58729087 -13424795 - MIR SINE MIR 0 262 84 24 0 0 0 chr20 58729712 58729736 -13424146 + AT_rich Low_complexity Low_complexity 1 24 0 225 328 164 17 chr20 58730177 58730415 -13423467 + L2 LINE L2 2583 2855 -459 902 160 13 101 chr20 58731790 58732027 -13421855 - MER20 DNA MER1_type -3 216 1 180 277 148 0 chr20 58735663 58735764 -13418118 + L3 LINE CR1 189 304 -1273 183 196 130 0 chr20 58736445 58736491 -13417391 + MIR SINE MIR 31 82 -180 2082 117 7 16 chr20 58736761 58737068 -13416814 + AluJo SINE Alu 1 304 -8 2233 95 0 30 chr20 58737706 58738010 -13415872 + AluSg1 SINE Alu 1 295 -14 217 333 139 0 chr20 58738323 58738431 -13415451 + L2 LINE L2 3149 3271 -1 1979 135 152 3 chr20 58739858 58740221 -13413661 - MSTB LTR MaLR 0 426 10 279 338 84 34 chr20 58741784 58742021 -13411861 + L1MC/D LINE L1 5600 5848 -1960 343 228 47 5 chr20 58746358 58746459 -13407423 - L1MD3 LINE L1 -6 7976 7678 2102 126 9 23 chr20 58746622 58746964 -13406918 - MER1B DNA MER1_type 0 337 1 316 234 106 50 chr20 58749643 58749784 -13404098 + L1ME LINE L1 5586 5734 -387 231 36 0 0 chr20 58749869 58749897 -13403985 + (A)n Simple_repeat Simple_repeat 1 28 0 2655 54 0 6 chr20 58749918 58750231 -13403651 + AluY SINE Alu 1 311 0 2133 90 66 24 chr20 58750427 58750715 -13403167 - AluSx SINE Alu -12 300 1 189 276 17 0 chr20 58751360 58751418 -13402464 + MIR SINE MIR 88 146 -62 565 152 0 0 chr20 58751935 58752027 -13401855 - AluSg/x SINE Alu -13 297 206 863 246 100 34 chr20 58752206 58752645 -13401237 + L1MC5 LINE L1 7461 7928 -33 2090 121 28 0 chr20 58752934 58753223 -13400659 + AluSg SINE Alu 1 297 -13 2247 96 7 3 chr20 58754410 58754703 -13399179 + AluSq SINE Alu 1 294 -19 271 277 47 1 chr20 58754827 58754921 -13398961 + MER5A DNA MER1_type 54 161 -28 2466 75 0 23 chr20 58755108 58755416 -13398466 + AluSg SINE Alu 1 301 -9 186 358 21 0 chr20 58756000 58756095 -13397787 - MIR SINE MIR -45 217 121 311 303 21 62 chr20 58756214 58756359 -13397523 - MIR3 SINE MIR -59 149 11 852 263 69 18 chr20 58756757 58757031 -13396851 + MLT1K LTR MaLR 289 576 -12 189 308 62 0 chr20 58757650 58757715 -13396167 + MIR SINE MIR 78 146 -62 2418 100 7 0 chr20 58758076 58758385 -13395497 - AluSx SINE Alu -1 311 1 278 340 0 9 chr20 58759211 58759317 -13394565 - Charlie8 DNA MER1_type -2272 145 41 1995 109 0 0 chr20 58759784 58760041 -13393841 + AluSx SINE Alu 43 299 -13 2833 214 18 25 chr20 58760048 58760229 -13393653 + MER82 DNA MER2_type 26 207 -446 2375 112 0 0 chr20 58760229 58760533 -13393349 + AluSx SINE Alu 1 304 -8 2833 214 18 25 chr20 58760533 58760978 -13392904 + MER82 DNA MER2_type 207 647 -6 2125 129 0 7 chr20 58761023 58761318 -13392564 - AluSx SINE Alu -15 297 5 1843 169 0 3 chr20 58761599 58761894 -13391988 + AluJo SINE Alu 4 297 -15 2329 95 0 22 chr20 58762271 58762586 -13391296 + AluSx SINE Alu 1 308 -4 387 269 114 11 chr20 58762976 58763151 -13390731 - MIR SINE MIR -64 198 6 567 312 47 32 chr20 58763923 58764327 -13389555 + L2 LINE L2 2819 3228 -85 180 0 0 0 chr20 58764359 58764379 -13389503 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 2220 98 0 0 chr20 58764383 58764658 -13389224 - AluSx SINE Alu -37 275 1 191 35 0 35 chr20 58764664 58764693 -13389189 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 334 272 33 22 chr20 58764927 58765019 -13388863 - MIR SINE MIR -61 201 109 2526 77 0 10 chr20 58765019 58765331 -13388551 + AluSq SINE Alu 1 309 -4 1958 136 0 36 chr20 58766052 58766353 -13387529 - AluJo SINE Alu -22 290 1 254 304 83 55 chr20 58766357 58766538 -13387344 - MIR SINE MIR -48 214 29 1807 165 0 31 chr20 58766606 58766927 -13386955 + AluJb SINE Alu 1 311 -1 2327 103 0 7 chr20 58767041 58767342 -13386540 + AluSx SINE Alu 1 299 -13 3005 127 55 31 chr20 58767405 58767847 -13386035 + MER51C LTR ERV1 5 506 -134 2240 109 7 0 chr20 58767847 58768149 -13385733 - AluSx SINE Alu -8 304 1 3005 127 55 31 chr20 58768149 58768288 -13385594 + MER51C LTR ERV1 506 640 0 197 417 19 0 chr20 58770249 58770357 -13383525 - MIR3 SINE MIR -87 121 12 205 267 33 0 chr20 58770638 58770698 -13383184 + (CCCGG)n Simple_repeat Simple_repeat 5 66 0 316 176 0 123 chr20 58771092 58771296 -13382586 + (CACCC)n Simple_repeat Simple_repeat 1 179 0 203 286 57 0 chr20 58771376 58771446 -13382436 + L2 LINE L2 3238 3311 -2 245 215 31 31 chr20 58771590 58771655 -13382227 + MIR SINE MIR 81 145 -63 485 310 70 0 chr20 58772499 58772657 -13381225 + MIR SINE MIR 3 171 -91 318 118 0 103 chr20 58772855 58772923 -13380959 - MER58 DNA MER1_type -3 2417 2357 2181 124 0 3 chr20 58772961 58773268 -13380614 + AluSx SINE Alu 1 306 -6 345 239 76 0 chr20 58773402 58773494 -13380388 - MER58 DNA MER1_type -70 271 173 1945 158 0 10 chr20 58773930 58774233 -13379649 + AluJo SINE Alu 1 300 -12 1944 131 0 26 chr20 58774289 58774621 -13379261 + AluSx SINE Alu 5 312 0 270 0 0 0 chr20 58775143 58775173 -13378709 + (TTCA)n Simple_repeat Simple_repeat 3 32 0 2046 109 0 0 chr20 58775173 58775449 -13378433 - AluSx SINE Alu -30 282 7 516 169 21 21 chr20 58775753 58775895 -13377987 + MER53 DNA DNA 23 164 -25 1946 121 11 4 chr20 58775896 58776200 -13377682 + AluSx SINE Alu 1 306 0 354 23 0 0 chr20 58776223 58776266 -13377616 + (TG)n Simple_repeat Simple_repeat 2 44 0 2020 146 0 3 chr20 58776366 58776668 -13377214 + AluJb SINE Alu 6 306 -6 281 377 8 66 chr20 58777353 58777449 -13376433 - MIR SINE MIR -29 233 133 1946 162 0 6 chr20 58777449 58777763 -13376119 - AluSx SINE Alu 0 312 1 281 377 8 66 chr20 58777763 58777910 -13375972 - MIR SINE MIR -129 133 4 2072 113 3 0 chr20 58777980 58778271 -13375611 + AluY SINE Alu 1 292 -19 645 133 26 26 chr20 58778590 58778703 -13375179 - AluJb SINE Alu -199 113 1 2011 102 44 0 chr20 58778742 58779036 -13374846 - AluSg SINE Alu -3 307 1 2125 110 3 25 chr20 58779103 58779420 -13374462 + AluSg SINE Alu 1 310 0 866 234 259 24 chr20 58779493 58779912 -13373970 + L2 LINE L2 2791 3300 -13 986 99 8 0 chr20 58779913 58780044 -13373838 + AluSq/x SINE Alu 1 132 -181 1504 88 0 5 chr20 58780048 58780242 -13373640 + AluSq SINE Alu 1 193 -120 224 200 0 0 chr20 58780245 58780285 -13373597 + MIR SINE MIR 112 151 -57 1380 174 41 14 chr20 58780287 58780580 -13373302 + AluSx SINE Alu 2 302 -10 315 361 78 45 chr20 58780649 58780984 -13372898 + L2 LINE L2 2966 3311 -2 449 295 64 13 chr20 58781330 58781464 -13372418 + MIR SINE MIR 11 170 -92 2092 123 0 0 chr20 58781464 58781799 -13372083 + AluSx SINE Alu 1 335 0 449 295 64 13 chr20 58781799 58781863 -13372019 + MIR SINE MIR 170 229 -33 747 299 76 69 chr20 58782411 58782950 -13370932 + MLT1K LTR MaLR 7 549 -39 2263 106 7 0 chr20 58783299 58783601 -13370281 - AluSx SINE Alu -8 304 1 2260 97 13 0 chr20 58784101 58784410 -13369472 + AluSq SINE Alu 1 313 0 209 300 88 0 chr20 58784876 58784956 -13368926 - MIR SINE MIR -20 242 156 2040 117 7 3 chr20 58784956 58785256 -13368626 - AluSx SINE Alu -11 301 1 2062 132 0 3 chr20 58786185 58786488 -13367394 - AluJb SINE Alu -7 305 4 240 206 174 11 chr20 58786488 58786580 -13367302 - MIR SINE MIR -36 226 120 251 250 0 0 chr20 58787778 58787830 -13366052 - MER45 DNA AcHobo 0 1581 1530 985 157 26 42 chr20 58787830 58787859 -13366023 + AluSg/x SINE Alu 111 139 -171 2196 98 27 0 chr20 58787859 58788154 -13365728 + AluSq SINE Alu 1 303 -10 985 157 26 42 chr20 58788154 58788315 -13365567 + AluSg/x SINE Alu 139 298 -12 2177 102 3 32 chr20 58788339 58788653 -13365229 + AluSx SINE Alu 2 306 -6 1237 69 12 0 chr20 58788653 58788813 -13365069 + AluSg/x SINE Alu 134 295 -17 622 194 0 0 chr20 58788815 58788918 -13364964 + AluJb SINE Alu 174 276 -36 236 301 219 41 chr20 58789527 58789896 -13363986 + L2 LINE L2 2874 3308 -5 223 308 61 34 chr20 58790061 58790399 -13363483 - L2 LINE L2 -169 3103 2676 341 297 45 0 chr20 58790828 58790939 -13362943 - MIR SINE MIR -80 182 67 269 219 27 27 chr20 58790996 58791069 -13362813 + MIR SINE MIR 58 130 -78 2083 146 0 9 chr20 58791072 58791387 -13362495 - AluSx SINE Alu 0 312 1 893 121 0 0 chr20 58791411 58791535 -13362347 - FLAM_C SINE Alu -19 124 1 390 101 0 0 chr20 58791660 58791729 -13362153 + (TC)n Simple_repeat Simple_repeat 1 69 0 333 353 78 24 chr20 58792050 58792217 -13361665 - MIR SINE MIR -65 197 22 409 317 133 15 chr20 58792335 58792770 -13361112 - L2 LINE L2 -69 3203 2705 362 333 0 15 chr20 58792871 58793003 -13360879 - L3b LINE CR1 -116 1467 1338 512 297 32 19 chr20 58793759 58793995 -13359887 - MIR SINE MIR -9 253 13 580 272 68 58 chr20 58794057 58794101 -13359781 - MER63A DNA MER1_type -1480 208 166 2134 107 10 3 chr20 58794101 58794409 -13359473 + AluSx SINE Alu 1 310 -2 580 272 68 58 chr20 58794409 58794570 -13359312 - MER63A DNA MER1_type -1522 166 1 248 223 160 32 chr20 58794965 58795059 -13358823 - MIR3 SINE MIR -53 155 82 1977 160 0 0 chr20 58795089 58795401 -13358481 - AluJb SINE Alu 0 312 1 483 276 66 46 chr20 58795472 58795668 -13358214 + L2 LINE L2 2985 3184 -88 693 204 0 78 chr20 58795829 58795870 -13358012 - MER58A DNA MER1_type -2196 224 181 2212 115 0 0 chr20 58795870 58796175 -13357707 + AluSx SINE Alu 1 305 -7 693 204 0 78 chr20 58796175 58796324 -13357558 - MER58A DNA MER1_type -2239 181 49 481 212 32 184 chr20 58796392 58796492 -13357390 - MIR SINE MIR -43 219 178 1663 178 19 16 chr20 58796492 58796801 -13357081 + AluJb SINE Alu 2 311 -1 481 212 32 184 chr20 58796801 58796950 -13356932 - MIR SINE MIR -84 178 8 265 315 54 15 chr20 58798260 58798390 -13355492 - MIR3 SINE MIR -40 168 34 417 289 171 19 chr20 58798421 58798684 -13355198 + L2 LINE L2 2933 3235 -78 2110 104 0 0 chr20 58798725 58799003 -13354879 + AluSx SINE Alu 14 291 -21 24 32 0 0 chr20 58799003 58799034 -13354848 + AT_rich Low_complexity Low_complexity 1 31 0 464 158 13 0 chr20 58799034 58799110 -13354772 - AluJo SINE Alu -178 134 58 2215 112 0 0 chr20 58800079 58800373 -13353509 + AluSx SINE Alu 1 294 -18 181 314 171 7 chr20 58800524 58800664 -13353218 - MIR SINE MIR -25 237 75 658 175 75 8 chr20 58800707 58800827 -13353055 + FLAM_A SINE Alu 2 129 -4 469 197 131 61 chr20 58801902 58802025 -13351857 - ORSL DNA AcHobo -63 212 99 2382 79 0 3 chr20 58802025 58802330 -13351552 - AluSp SINE Alu -9 304 1 1549 138 9 120 chr20 58802333 58802666 -13351216 - AluJo SINE Alu -6 296 1 469 197 131 61 chr20 58802666 58802736 -13351146 - ORSL DNA AcHobo -177 98 1 273 325 81 6 chr20 58803243 58803403 -13350479 - L1P5 LINE L1 -721 5430 5259 309 26 0 0 chr20 58803460 58803498 -13350384 + (TG)n Simple_repeat Simple_repeat 1 38 0 2353 90 3 0 chr20 58803886 58804197 -13349685 + AluSp SINE Alu 1 312 -1 769 155 7 84 chr20 58804207 58804244 -13349638 + AluJo SINE Alu 1 39 -273 1904 125 3 48 chr20 58804244 58804556 -13349326 - AluSx SINE Alu -14 298 1 769 155 7 84 chr20 58804556 58804673 -13349209 + AluJo SINE Alu 39 143 -169 357 114 38 0 chr20 58804673 58804742 -13349140 + MER4D LTR ERV1 671 845 -30 1011 140 0 80 chr20 58804755 58804814 -13349068 + AluJo SINE Alu 129 191 -121 2492 57 0 25 chr20 58804814 58805132 -13348750 - AluY SINE Alu -1 310 1 1011 140 0 80 chr20 58805132 58805272 -13348610 + AluJo SINE Alu 191 312 0 671 171 0 0 chr20 58805286 58805391 -13348491 - AluJb SINE Alu -207 105 1 194 0 39 0 chr20 58805596 58805622 -13348260 + (TTTTC)n Simple_repeat Simple_repeat 3 29 0 1269 162 3 128 chr20 58805644 58805940 -13347942 - AluSp SINE Alu -54 259 1 2234 114 0 6 chr20 58805946 58806261 -13347621 - AluSq SINE Alu 0 313 1 1714 154 0 14 chr20 58807239 58807551 -13346331 - AluJo SINE Alu 0 308 1 2339 87 7 0 chr20 58808159 58808458 -13345424 + AluSq SINE Alu 1 301 -12 428 249 102 45 chr20 58808531 58808593 -13345289 + MIR3 SINE MIR 1 58 -150 2650 42 0 0 chr20 58808593 58808901 -13344981 - AluY SINE Alu -3 308 1 428 249 102 45 chr20 58808901 58809015 -13344867 + MIR3 SINE MIR 58 187 -21 2192 125 0 0 chr20 58809113 58809417 -13344465 + AluSq SINE Alu 1 304 -9 1105 196 30 67 chr20 58809431 58809570 -13344312 - MLT1C LTR MaLR -5 462 319 3598 112 35 21 chr20 58809570 58810090 -13343792 - MER1A DNA MER1_type 0 527 1 1105 196 30 67 chr20 58810090 58810281 -13343601 - MLT1C LTR MaLR -148 319 144 1996 130 14 0 chr20 58810282 58810575 -13343307 + AluSx SINE Alu 1 297 -15 192 239 142 44 chr20 58810991 58811104 -13342778 + MIR SINE MIR 46 169 -93 1000 215 27 70 chr20 58811118 58811430 -13342452 - MLT1A1 LTR MaLR -23 444 46 1765 171 3 10 chr20 58811430 58811723 -13342159 - AluSx SINE Alu -21 291 1 1000 215 27 70 chr20 58811723 58811768 -13342114 - MLT1A1 LTR MaLR -421 46 1 343 223 61 26 chr20 58811893 58812085 -13341797 + MLT1E3 LTR MaLR 5 211 -413 958 99 0 0 chr20 58812086 58812217 -13341665 - AluSg/x SINE Alu -7 303 173 1614 178 107 24 chr20 58812219 58812601 -13341281 + MLT1E3 LTR MaLR 211 624 0 473 285 6 38 chr20 58812653 58812811 -13341071 + MIR SINE MIR 2 154 -108 2304 112 0 0 chr20 58813428 58813776 -13340106 + AluSx SINE Alu 1 348 0 2986 210 11 39 chr20 58813836 58814561 -13339321 + L1MB7 LINE L1 5419 6123 -61 1026 118 65 0 chr20 58814561 58814714 -13339168 - AluSg/x SINE Alu -16 296 134 1488 168 4 4 chr20 58814714 58814964 -13338918 - AluJb SINE Alu -16 296 47 481 296 55 18 chr20 58815045 58815265 -13338617 + L2 LINE L2 2994 3221 -92 1733 122 0 0 chr20 58815276 58815521 -13338361 - AluSq SINE Alu -3 310 66 742 53 0 0 chr20 58815542 58815636 -13338246 - AluY SINE Alu -4 307 214 440 264 9 19 chr20 58815638 58815744 -13338138 + L2 LINE L2 3209 3313 0 1809 168 3 13 chr20 58815853 58816168 -13337714 - AluJb SINE Alu 0 312 1 315 0 0 0 chr20 58816789 58816824 -13337058 + (TG)n Simple_repeat Simple_repeat 2 36 0 1723 67 9 9 chr20 58817118 58817342 -13336540 - AluSg/x SINE Alu -3 309 86 775 275 50 0 chr20 58817359 58817577 -13336305 + MIR SINE MIR 31 259 -3 596 304 43 43 chr20 58817589 58817659 -13336223 - L1ME4a LINE L1 -215 5906 5837 1681 112 105 0 chr20 58817659 58817917 -13335965 - AluSg SINE Alu -25 285 1 596 304 43 43 chr20 58817917 58818195 -13335687 - L1ME4a LINE L1 -283 5838 5558 865 125 0 0 chr20 58818224 58818344 -13335538 + FLAM_C SINE Alu 1 120 -23 2135 148 3 0 chr20 58818364 58818675 -13335207 + AluSx SINE Alu 1 312 0 1879 133 9 40 chr20 58818862 58819184 -13334698 - AluJo SINE Alu 0 312 1 1903 145 12 6 chr20 58819205 58819543 -13334339 + L1MB3 LINE L1 5634 5973 -210 1735 168 31 21 chr20 58819545 58819836 -13334046 + AluJo SINE Alu 1 294 -18 370 303 35 30 chr20 58819842 58820015 -13333867 - MIR3 SINE MIR -54 154 17 2435 99 0 0 chr20 58820484 58820788 -13333094 + AluSq SINE Alu 1 304 -9 2133 182 26 26 chr20 58821335 58821792 -13332090 - MSTB2 LTR MaLR 0 457 1 1763 140 15 85 chr20 58821869 58822075 -13331807 - AluJb SINE Alu -7 305 129 2431 84 7 0 chr20 58822075 58822373 -13331509 + AluSx SINE Alu 1 300 -12 1763 140 15 85 chr20 58822373 58822494 -13331388 - AluJb SINE Alu -183 129 1 217 286 27 89 chr20 58823493 58823605 -13330277 - MIR SINE MIR -86 122 31 365 296 64 0 chr20 58823797 58823922 -13329960 + MIR3 SINE MIR 30 162 -46 2205 115 7 7 chr20 58823932 58824236 -13329646 + AluSx SINE Alu 1 304 -8 250 307 55 31 chr20 58824546 58824673 -13329209 + MIR SINE MIR 102 231 -31 2374 96 0 0 chr20 58825045 58825346 -13328536 - AluSq SINE Alu -12 301 1 324 65 0 0 chr20 58825353 58825399 -13328483 + MADE1 DNA Mariner 35 80 0 188 167 188 73 chr20 58825668 58825764 -13328118 + MIR SINE MIR 30 136 -72 441 211 24 24 chr20 58825771 58825894 -13327988 + MER117 DNA MER1_type 1 123 -74 2330 118 0 9 chr20 58825939 58826254 -13327628 + AluSx SINE Alu 1 312 0 1355 136 9 55 chr20 58826274 58826494 -13327388 + AluJb SINE Alu 1 210 -102 2335 92 0 3 chr20 58826541 58826836 -13327046 - AluSg SINE Alu -13 297 4 239 342 13 0 chr20 58826924 58827000 -13326882 + MLT1K LTR MaLR 184 260 -328 427 274 0 18 chr20 58827021 58827134 -13326748 + MLT1K LTR MaLR 455 565 -23 2067 104 3 47 chr20 58827303 58827643 -13326239 - AluSx SINE Alu 0 327 1 2132 127 16 0 chr20 58827672 58827979 -13325903 - AluSx SINE Alu 0 312 1 2605 69 0 0 chr20 58828406 58828711 -13325171 - AluSg SINE Alu -5 305 1 341 328 8 0 chr20 58828950 58829069 -13324813 + MIR SINE MIR 71 190 -72 2307 108 0 0 chr20 58829694 58829991 -13323891 + AluSx SINE Alu 1 297 -15 309 294 4 21 chr20 58830011 58830304 -13323578 + (CA)n Simple_repeat Simple_repeat 1 287 0 2609 68 0 3 chr20 58830994 58831303 -13322579 + AluSq SINE Alu 1 308 -5 1243 127 0 0 chr20 58832038 58832230 -13321652 - AluSx SINE Alu 0 309 118 855 109 0 0 chr20 58832298 58832408 -13321474 - AluSx SINE Alu -202 110 1 450 226 21 0 chr20 58832417 58832510 -13321372 + MLT1F1 LTR MaLR 103 197 -370 291 114 0 0 chr20 58832536 58832580 -13321302 + (CA)n Simple_repeat Simple_repeat 1 44 0 230 297 81 0 chr20 58832590 58832664 -13321218 + MLT1F1 LTR MaLR 311 390 -264 363 238 63 40 chr20 58832707 58832833 -13321049 + MIR SINE MIR 69 197 -65 815 182 0 11 chr20 58832836 58833017 -13320865 + (TGGA)n Simple_repeat Simple_repeat 1 179 0 942 145 0 0 chr20 58833032 58833198 -13320684 + (TGGA)n Simple_repeat Simple_repeat 3 168 0 237 283 234 0 chr20 58834367 58834512 -13319370 - MIR SINE MIR -70 192 14 473 322 94 10 chr20 58835366 58835568 -13318314 + MIR SINE MIR 31 249 -13 1694 205 98 12 chr20 58835614 58835784 -13318098 + MLT1C LTR MaLR 1 155 -312 747 160 0 30 chr20 58835784 58835915 -13317967 + FLAM_C SINE Alu 1 127 -6 1339 163 81 64 chr20 58835920 58836203 -13317679 + AluJo SINE Alu 1 288 -24 1694 205 98 12 chr20 58836203 58836456 -13317426 + MLT1C LTR MaLR 158 467 0 365 302 188 26 chr20 58836457 58836649 -13317233 - MIR SINE MIR -22 240 18 280 295 124 8 chr20 58836711 58836840 -13317042 - MIR SINE MIR -104 158 15 2059 147 0 0 chr20 58837489 58837788 -13316094 + AluJo SINE Alu 1 299 -13 762 115 39 15 chr20 58837894 58838024 -13315858 - FLAM_C SINE Alu 0 133 1 272 313 71 0 chr20 58838185 58838284 -13315598 - MIR SINE MIR -70 192 87 192 298 32 32 chr20 58838383 58838477 -13315405 - MIR SINE MIR -32 230 137 2392 109 0 0 chr20 58838478 58838791 -13315091 - AluSq SINE Alu 0 313 1 2350 107 0 0 chr20 58838791 58839089 -13314793 - AluSx SINE Alu -14 298 1 328 307 10 0 chr20 58839686 58839787 -13314095 + L1MC/D LINE L1 5690 5791 -2017 334 134 30 15 chr20 58839884 58839951 -13313931 - MIR SINE MIR -50 212 145 2082 139 0 3 chr20 58839959 58840254 -13313628 + AluJo SINE Alu 19 312 0 285 266 18 0 chr20 58840255 58840364 -13313518 + (TA)n Simple_repeat Simple_repeat 2 112 0 180 254 45 100 chr20 58840417 58840480 -13313402 - MIR SINE MIR -136 126 70 1908 139 3 48 chr20 58840480 58840600 -13313282 + AluJo SINE Alu 1 125 -187 2293 73 0 47 chr20 58840600 58840901 -13312981 + AluSc SINE Alu 6 292 -17 1908 139 3 48 chr20 58840901 58841096 -13312786 + AluJo SINE Alu 125 302 -10 180 254 45 100 chr20 58841096 58841142 -13312740 - MIR SINE MIR -192 70 23 2000 134 10 10 chr20 58842067 58842372 -13311510 + AluJb SINE Alu 6 310 -2 284 330 72 0 chr20 58842436 58842533 -13311349 - MIR SINE MIR -60 148 45 756 236 24 47 chr20 58842582 58842794 -13311088 + MIR SINE MIR 23 229 -33 439 252 155 38 chr20 58843132 58843422 -13310460 + L1ME3A LINE L1 5548 5871 -299 1751 151 28 25 chr20 58843445 58843730 -13310152 + AluJb SINE Alu 1 286 -26 205 156 0 0 chr20 58843730 58843762 -13310120 + (TG)n Simple_repeat Simple_repeat 1 32 0 2284 102 3 0 chr20 58843851 58844144 -13309738 - AluSp SINE Alu -17 296 3 655 158 9 0 chr20 58844174 58844288 -13309594 + L1MB3 LINE L1 6039 6153 -30 2041 149 0 13 chr20 58844568 58844876 -13309006 - AluSx SINE Alu -8 304 1 2123 141 0 3 chr20 58844917 58845215 -13308667 + AluSx SINE Alu 1 297 -15 965 256 114 27 chr20 58845215 58845887 -13307995 - L2 LINE L2 -94 3219 2511 1894 168 3 16 chr20 58845887 58846197 -13307685 - AluJo SINE Alu -4 308 3 2380 75 24 0 chr20 58846342 58846634 -13307248 - AluSg SINE Alu -11 299 1 2297 92 17 3 chr20 58846661 58846956 -13306926 + AluSx SINE Alu 1 299 -13 386 314 7 33 chr20 58846980 58847133 -13306749 + L1MC4a LINE L1 5802 5950 -1858 2567 54 0 3 chr20 58847177 58847475 -13306407 - AluY SINE Alu -14 297 1 2372 102 3 6 chr20 58847586 58847899 -13305983 + AluSx SINE Alu 1 312 0 764 165 20 182 chr20 58848597 58848739 -13305143 + MER63 DNA MER1_type 1 54 -1007 2156 141 0 3 chr20 58848739 58849037 -13304845 + AluSx SINE Alu 1 297 -15 764 165 20 182 chr20 58849037 58849245 -13304637 + MER63 DNA MER1_type 54 294 -767 2031 162 0 13 chr20 58849260 58849574 -13304308 - AluJo SINE Alu -2 310 1 867 168 7 0 chr20 58849574 58849729 -13304153 + MER63 DNA MER1_type 905 1060 0 2416 101 3 0 chr20 58850289 58850595 -13303287 - AluSx SINE Alu -5 307 1 453 294 44 7 chr20 58850678 58850814 -13303068 - MIR3 SINE MIR -7 201 61 269 150 0 0 chr20 58850814 58850854 -13303028 + MER81 DNA DNA 1 40 -74 514 301 21 4 chr20 58851757 58851979 -13301903 + MIR SINE MIR 38 261 -1 366 287 23 23 chr20 58851987 58852116 -13301766 - MIR3 SINE MIR -38 170 42 255 303 8 34 chr20 58852963 58853082 -13300800 + CT-rich Low_complexity Low_complexity 2 117 0 1200 176 5 22 chr20 58853840 58854062 -13299820 - AluJo SINE Alu -10 302 85 690 182 0 35 chr20 58854080 58854223 -13299659 - FLAM_C SINE Alu 0 143 6 2282 108 0 0 chr20 58854556 58854852 -13299030 - AluSx SINE Alu -16 296 1 687 160 0 17 chr20 58854969 58855088 -13298794 + FLAM_C SINE Alu 2 118 -15 38 0 0 0 chr20 58855088 58855126 -13298756 + AT_rich Low_complexity Low_complexity 1 38 0 1209 164 8 78 chr20 58855140 58855276 -13298606 + AluJb SINE Alu 1 114 -198 2413 87 3 0 chr20 58855276 58855575 -13298307 + AluSp SINE Alu 1 300 -13 1209 164 8 78 chr20 58855575 58855682 -13298200 + AluJb SINE Alu 114 227 -85 561 148 0 0 chr20 58855682 58855770 -13298112 - AluSg/x SINE Alu -71 241 154 377 174 0 0 chr20 58855773 58855842 -13298040 + Alu SINE Alu 231 299 -2 491 143 8 25 chr20 58855861 58855980 -13297902 + GA-rich Low_complexity Low_complexity 2 118 0 938 219 70 30 chr20 58856666 58856936 -13296946 - MER113 DNA MER1_type? 0 521 241 781 202 9 41 chr20 58857021 58857239 -13296643 + L1MC3 LINE L1 7568 7778 -7 2047 116 38 3 chr20 58857249 58857541 -13296341 + AluSx SINE Alu 9 310 -2 1575 119 72 103 chr20 58857633 58857953 -13295929 + AluJb SINE Alu 1 310 -2 487 183 8 25 chr20 58857953 58858073 -13295809 + L1MC4 LINE L1 7925 8042 0 315 244 0 0 chr20 58858089 58858167 -13295715 - MER113 DNA MER1_type? -412 109 32 485 202 11 0 chr20 58858268 58858357 -13295525 - AluJ SINE Alu -93 219 130 270 81 0 0 chr20 58858379 58858416 -13295466 + (GA)n Simple_repeat Simple_repeat 2 38 0 2133 116 0 3 chr20 58858416 58858700 -13295182 - AluSq SINE Alu -30 283 1 2104 116 42 0 chr20 58858700 58858984 -13294898 - AluSx SINE Alu -14 298 3 800 136 0 0 chr20 58858988 58859098 -13294784 - AluJ SINE Alu -183 129 20 1529 132 31 62 chr20 58859481 58859616 -13294266 + AluJo SINE Alu 12 150 -162 2340 95 13 3 chr20 58859616 58859920 -13293962 + AluSq SINE Alu 1 307 -6 1529 132 31 62 chr20 58859920 58860072 -13293810 + AluJo SINE Alu 150 290 -22 2375 89 3 13 chr20 58860127 58860431 -13293451 + AluSx SINE Alu 1 301 -11 657 228 19 22 chr20 58860897 58861076 -13292806 + MIR SINE MIR 23 202 -60 428 259 142 12 chr20 58861078 58861179 -13292703 + MER5A DNA MER1_type 7 94 -95 2214 109 3 20 chr20 58861179 58861483 -13292399 - AluSx SINE Alu -12 300 2 428 259 142 12 chr20 58861483 58861543 -13292339 + MER5A DNA MER1_type 94 189 0 191 310 42 0 chr20 58861543 58861612 -13292270 + MIR SINE MIR 191 262 0 189 0 0 0 chr20 58861612 58861633 -13292249 + (CAT)n Simple_repeat Simple_repeat 2 22 0 651 168 0 0 chr20 58861680 58861787 -13292095 + L1M1 LINE L1 378 484 -7081 2073 105 10 46 chr20 58863144 58863449 -13290433 - AluSx SINE Alu -18 294 1 551 237 101 48 chr20 58863638 58863866 -13290016 - MIR SINE MIR -5 257 18 1957 152 3 10 chr20 58864090 58864387 -13289495 + AluJo SINE Alu 3 297 -15 1959 142 3 13 chr20 58864388 58864697 -13289185 + AluSx SINE Alu 1 306 -6 421 247 70 6 chr20 58864918 58865076 -13288806 + MLT1H LTR MaLR 66 233 -316 944 144 0 0 chr20 58865094 58865233 -13288649 - FRAM SINE Alu 0 40 1 2440 103 0 0 chr20 58865326 58865637 -13288245 + AluSx SINE Alu 1 311 -1 1458 254 92 5 chr20 58865745 58866189 -13287693 + MER20B DNA MER1_type 247 729 -54 2948 169 11 43 chr20 58866322 58866433 -13287449 + L1MB7 LINE L1 5504 5617 -567 2190 105 14 14 chr20 58866433 58866729 -13287153 - AluSx SINE Alu -16 296 1 2948 169 11 43 chr20 58866729 58866953 -13286929 + L1MB7 LINE L1 5617 5847 -337 2099 131 10 0 chr20 58866953 58867250 -13286632 + AluSx SINE Alu 1 300 -12 2948 169 11 43 chr20 58867250 58867541 -13286341 + L1MB7 LINE L1 5847 6111 -73 1744 160 53 7 chr20 58867547 58867828 -13286054 + AluJo SINE Alu 1 294 -18 2414 57 0 23 chr20 58867830 58868129 -13285753 + AluY SINE Alu 15 306 -5 363 125 16 0 chr20 58868197 58868261 -13285621 + L1MB7 LINE L1 6106 6170 -14 227 292 146 10 chr20 58868306 58868402 -13285480 - L2 LINE L2 -560 2754 2646 2469 54 7 3 chr20 58868425 58868723 -13285159 + AluY SINE Alu 1 299 -12 186 250 21 0 chr20 58868921 58868969 -13284913 - L2 LINE L2 -219 3053 3005 207 290 160 10 chr20 58869136 58869236 -13284646 - MIR SINE MIR -79 183 69 2028 104 24 44 chr20 58869277 58869575 -13284307 + AluSx SINE Alu 1 292 -20 1386 169 7 91 chr20 58869575 58869751 -13284131 - AluJo SINE Alu -30 282 93 1931 135 46 3 chr20 58869751 58870033 -13283849 + AluSx SINE Alu 1 294 -18 870 138 0 0 chr20 58870033 58870163 -13283719 - AluJo/FLAM SINE Alu -171 131 2 24 32 0 0 chr20 58870663 58870694 -13283188 + AT_rich Low_complexity Low_complexity 1 31 0 1580 175 7 23 chr20 58870736 58871039 -13282843 + AluJb SINE Alu 1 298 -14 1950 95 3 44 chr20 58871044 58871391 -13282491 + AluSx SINE Alu 1 312 0 810 199 6 0 chr20 58871466 58871637 -13282245 - AluJo SINE Alu -3 309 138 259 255 28 121 chr20 58871829 58871855 -13282027 - L2 LINE L2 -25 3288 3261 1660 178 0 3 chr20 58871855 58872153 -13281729 - AluJo SINE Alu -15 297 1 259 255 28 121 chr20 58872153 58872267 -13281615 - L2 LINE L2 -52 3261 3161 * 1134 227 95 165 chr20 58872240 58872710 -13281172 - L2 LINE L2 -338 2976 2475 625 169 73 59 chr20 58872710 58872735 -13281147 - AluJo SINE Alu -173 139 116 2028 90 32 4 chr20 58872735 58873064 -13280818 - AluSq SINE Alu 0 337 1 189 0 0 0 chr20 58873064 58873085 -13280797 + (ATTG)n Simple_repeat Simple_repeat 2 22 0 625 169 73 59 chr20 58873085 58873193 -13280689 - AluJo SINE Alu -195 117 2 1134 227 95 165 chr20 58873193 58873527 -13280355 - L2 LINE L2 -839 2475 2103 1566 197 3 7 chr20 58873548 58873847 -13280035 + AluJo SINE Alu 1 298 -14 224 253 172 30 chr20 58873920 58874019 -13279863 + MIR3 SINE MIR 6 118 -90 1839 133 51 0 chr20 58874263 58874557 -13279325 - AluJo SINE Alu 0 312 4 211 318 258 7 chr20 58875071 58875222 -13278660 - MIR SINE MIR -51 211 23 2376 71 0 7 chr20 58875296 58875605 -13278277 - AluY SINE Alu -4 307 1 1981 118 0 7 chr20 58875639 58875928 -13277954 - AluSx SINE Alu -25 287 1 564 194 139 18 chr20 58875928 58876093 -13277789 + MER5C DNA MER1_type 138 322 -2 838 103 9 0 chr20 58876136 58876252 -13277630 + FLAM_C SINE Alu 2 118 -15 1338 152 164 0 chr20 58876732 58876982 -13276900 - AluJb SINE Alu -21 291 1 2390 76 0 0 chr20 58877259 58877560 -13276322 + AluSx SINE Alu 1 301 -11 364 252 70 84 chr20 58877621 58877835 -13276047 + MIR SINE MIR 38 248 -14 199 271 0 0 chr20 58877907 58877955 -13275927 - MIR SINE MIR -12 250 203 201 74 0 0 chr20 58877971 58877998 -13275884 + (T)n Simple_repeat Simple_repeat 1 27 0 2312 109 0 0 chr20 58878011 58878384 -13275498 + AluSq SINE Alu 1 373 0 822 206 0 0 chr20 58878384 58878530 -13275352 - FRAM SINE Alu -30 146 1 1844 159 7 0 chr20 58878569 58878865 -13275017 - AluJb SINE Alu -12 300 3 1672 175 33 3 chr20 58878917 58879220 -13274662 - AluJb SINE Alu 0 312 1 734 211 33 28 chr20 58879922 58880102 -13273780 + MIR SINE MIR 20 200 -62 291 291 89 0 chr20 58880103 58880182 -13273700 + MER81 DNA DNA 29 114 0 2058 121 7 3 chr20 58880195 58880493 -13273389 + AluSx SINE Alu 1 299 -13 819 170 7 7 chr20 58880550 58880685 -13273197 - AluJo SINE Alu -176 136 2 1786 126 50 4 chr20 58880717 58880995 -13272887 - AluSg SINE Alu -19 291 1 1773 144 10 10 chr20 58881401 58881706 -13272176 + AluJb SINE Alu 1 305 -7 813 241 108 21 chr20 58881729 58881970 -13271912 - MIR SINE MIR 0 262 1 2361 78 0 0 chr20 58882074 58882380 -13271502 - AluY SINE Alu -5 306 1 1890 185 19 69 chr20 58882532 58882654 -13271228 + MLT1C LTR MaLR 1 128 -339 2131 117 0 3 chr20 58882654 58882953 -13270929 + AluSx SINE Alu 1 298 -14 1890 185 19 69 chr20 58882953 58883294 -13270588 + MLT1C LTR MaLR 128 441 -26 2058 123 7 0 chr20 58883311 58883619 -13270263 + AluSx SINE Alu 1 310 -2 1808 153 0 3 chr20 58883861 58884149 -13269733 + AluJb SINE Alu 2 288 -24 232 368 35 9 chr20 58884166 58884280 -13269602 + MER5A DNA MER1_type 72 188 -1 336 271 39 90 chr20 58884555 58884656 -13269226 + L2 LINE L2 2743 2835 -479 2199 104 0 3 chr20 58884656 58884955 -13268927 - AluSx SINE Alu -14 298 1 336 271 39 90 chr20 58884955 58885008 -13268874 + L2 LINE L2 2835 2889 -425 266 50 25 0 chr20 58885063 58885103 -13268779 + (CA)n Simple_repeat Simple_repeat 1 41 0 493 198 97 87 chr20 58885134 58885195 -13268687 + Charlie8 DNA MER1_type 73 132 -2285 1839 163 0 7 chr20 58885195 58885496 -13268386 + AluJo SINE Alu 3 301 -11 493 198 97 87 chr20 58885496 58885641 -13268241 + Charlie8 DNA MER1_type 132 281 -2136 306 241 46 11 chr20 58885661 58885748 -13268134 + L2 LINE L2 3182 3271 -1 187 320 53 50 chr20 58885977 58886280 -13267602 + L2 LINE L2 2811 3114 -158 328 224 169 80 chr20 58886429 58886666 -13267216 + L2 LINE L2 3014 3271 -42 792 128 0 0 chr20 58886667 58886776 -13267106 + AluJ SINE Alu 2 110 -202 697 54 0 0 chr20 58886776 58886904 -13266978 - AluY SINE Alu 0 319 192 1126 150 5 61 chr20 58886905 58887118 -13266764 + AluJb SINE Alu 102 302 -10 207 256 0 0 chr20 58887118 58887157 -13266725 + L2 LINE L2 3257 3295 -18 2195 88 3 3 chr20 58887161 58887457 -13266425 - AluSp SINE Alu -17 296 1 740 155 9 0 chr20 58887487 58887603 -13266279 - FLAM_C SINE Alu -25 118 2 382 297 83 7 chr20 58887630 58887775 -13266107 - MIR SINE MIR -98 164 9 761 248 69 25 chr20 58888111 58888348 -13265534 - MIR SINE MIR 0 262 5 470 264 5 83 chr20 58888488 58888681 -13265201 - MIR SINE MIR -32 230 53 209 239 141 0 chr20 58888748 58888819 -13265063 + MIR SINE MIR 180 260 -2 365 228 22 11 chr20 58888965 58889057 -13264825 - MIR3 SINE MIR -7 201 109 1099 186 52 14 chr20 58890492 58890702 -13263180 + Charlie1 DNA MER1_type 10 227 -2534 619 142 58 0 chr20 58890709 58890829 -13263053 + Charlie1 DNA MER1_type 2635 2761 0 27 62 0 0 chr20 58892974 58893022 -13260860 + GC_rich Low_complexity Low_complexity 1 48 0 286 244 218 0 chr20 58893797 58893875 -13260007 - MIR3 SINE MIR -23 185 91 2272 86 0 13 chr20 58894259 58894572 -13259310 + AluSq SINE Alu 3 311 -2 1616 159 58 0 chr20 58895474 58895629 -13258253 - AluJb SINE Alu -20 292 147 270 0 0 0 chr20 58895629 58895659 -13258223 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 1616 159 58 0 chr20 58895659 58895779 -13258103 - AluJb SINE Alu -165 147 1 747 188 0 0 chr20 58895806 58895934 -13257948 - FLAM_C SINE Alu -9 134 7 2169 100 0 7 chr20 58895987 58896286 -13257596 + AluSx SINE Alu 1 297 -15 2188 114 3 0 chr20 58897809 58898117 -13255765 - AluSg SINE Alu -1 309 1 408 277 200 0 chr20 58899637 58899767 -13254115 + MIR SINE MIR 97 252 -10 539 193 167 0 chr20 58899926 58900040 -13253842 - FLAM_C SINE Alu 0 133 1 1963 107 32 0 chr20 58900284 58900564 -13253318 + AluSx SINE Alu 1 289 -23 27 29 0 0 chr20 58901846 58901880 -13252002 + AT_rich Low_complexity Low_complexity 1 34 0 363 296 171 35 chr20 58901912 58902074 -13251808 + L2 LINE L2 2710 2849 -464 2213 98 7 7 chr20 58902074 58902380 -13251502 - AluSx SINE Alu -6 306 1 363 296 171 35 chr20 58902380 58902538 -13251344 + L2 LINE L2 2849 3086 -227 2028 49 49 35 chr20 58902677 58902965 -13250917 - AluY SINE Alu -19 292 1 189 0 0 0 chr20 58903175 58903196 -13250686 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 1762 124 34 0 chr20 58903197 58903463 -13250419 - AluSx SINE Alu -37 275 1 1981 128 0 0 chr20 58903471 58903785 -13250097 - AluSx SINE Alu 0 314 1 227 338 35 63 chr20 58904197 58904339 -13249543 - MER5B DNA MER1_type -36 142 5 2244 60 0 3 chr20 58904746 58905029 -13248853 + AluY SINE Alu 21 302 -9 490 282 184 45 chr20 58905040 58905222 -13248660 + L2 LINE L2 2402 2557 -756 2123 102 3 0 chr20 58905222 58905527 -13248355 - AluSp SINE Alu -1 312 7 490 282 184 45 chr20 58905527 58905752 -13248130 + L2 LINE L2 2557 2749 -564 216 0 0 0 chr20 58905752 58905776 -13248106 + (TCCC)n Simple_repeat Simple_repeat 2 25 0 490 282 184 45 chr20 58905776 58906177 -13247705 + L2 LINE L2 2749 3307 -6 2011 89 64 0 chr20 58906267 58906547 -13247335 + AluSx SINE Alu 1 298 -14 1499 184 10 27 chr20 58906632 58906926 -13246956 - AluJo SINE Alu -23 289 1 295 242 16 0 chr20 58906976 58907038 -13246844 + MER58 DNA MER1_type 2358 2420 0 387 149 0 0 chr20 58908558 58908632 -13245250 + (T)n Simple_repeat Simple_repeat 1 74 0 383 251 123 66 chr20 58908974 58909177 -13244705 + Charlie8 DNA MER1_type 200 421 -1996 1981 110 0 17 chr20 58909177 58909469 -13244413 + AluSx SINE Alu 2 288 -24 383 251 123 66 chr20 58909469 58909508 -13244374 + Charlie8 DNA MER1_type 421 456 -1961 1021 199 76 34 chr20 58909679 58909941 -13243941 - AluJo SINE Alu -39 273 1 767 169 8 0 chr20 58910011 58910141 -13243741 + FLAM_C SINE Alu 1 131 -2 2236 85 0 0 chr20 58910181 58910476 -13243406 + AluY SINE Alu 1 295 -16 1824 152 33 0 chr20 58912063 58912379 -13241503 - AluJo SINE Alu 0 326 1 2342 63 30 0 chr20 58912463 58912763 -13241119 - AluY SINE Alu 0 311 3 1674 103 95 8 chr20 58912843 58913105 -13240777 - AluSx SINE Alu -13 299 15 2087 113 0 10 chr20 58915276 58915576 -13238306 + AluSg SINE Alu 1 297 -13 2354 45 0 35 chr20 58915901 58916213 -13237669 - AluY SINE Alu -10 301 1 2367 43 0 23 chr20 58916769 58917068 -13236814 + AluY SINE Alu 2 293 -18 487 254 48 0 chr20 58917538 58917664 -13236218 + MER94 DNA DNA 2 133 -1 225 250 0 79 chr20 58917674 58917750 -13236132 + MER112 DNA MER1_type 7 76 -184 1795 222 122 51 chr20 58917974 58918481 -13235401 - L1MC4 LINE L1 -2 8040 7480 2086 104 10 7 chr20 58918481 58918778 -13235104 + AluSx SINE Alu 1 298 -14 1795 222 122 51 chr20 58918778 58918883 -13234999 - L1MC4 LINE L1 -562 7480 7384 22 0 0 0 chr20 58918906 58918928 -13234954 + AT_rich Low_complexity Low_complexity 1 22 0 1871 129 3 17 chr20 58918928 58919223 -13234659 + AluJo SINE Alu 2 292 -20 2074 131 0 3 chr20 58919267 58919579 -13234303 + AluSx SINE Alu 1 311 -1 247 260 77 48 chr20 58919846 58919950 -13233932 - MLT1K LTR MaLR -11 577 471 809 194 6 24 chr20 58919984 58920149 -13233733 + MER3 DNA MER1_type 47 208 -1 854 283 129 14 chr20 58920157 58920469 -13233413 - MLT1K LTR MaLR -162 426 68 2212 109 0 0 chr20 58920469 58920773 -13233109 + AluSq SINE Alu 1 304 -9 854 283 129 14 chr20 58920773 58920810 -13233072 - MLT1K LTR MaLR -520 68 37 1425 157 79 0 chr20 58920850 58921079 -13232803 - AluJo SINE Alu -14 298 52 1557 139 54 19 chr20 58921312 58921570 -13232312 + AluJo SINE Alu 46 312 0 316 235 201 13 chr20 58921713 58921862 -13232020 - MER102b DNA MER1_type -2 339 163 2449 86 0 3 chr20 58921867 58922169 -13231713 - AluSq SINE Alu -12 301 1 2435 75 0 7 chr20 58922200 58922505 -13231377 - AluSc SINE Alu -6 303 1 908 181 17 28 chr20 58923324 58923501 -13230381 - AluJo SINE Alu -18 294 120 2142 139 3 3 chr20 58923523 58923824 -13230058 - AluJo SINE Alu -11 301 1 270 0 0 0 chr20 58923871 58923901 -13229981 + (CA)n Simple_repeat Simple_repeat 2 31 0 2127 135 6 6 chr20 58924420 58924732 -13229150 - AluSx SINE Alu 0 312 1 1303 161 80 52 chr20 58924734 58924893 -13228989 - AluJb SINE Alu -18 294 122 2314 110 3 0 chr20 58924893 58925192 -13228690 - AluSx SINE Alu -12 300 1 1303 161 80 52 chr20 58925192 58925318 -13228564 - AluJb SINE Alu -190 122 1 1339 81 0 0 chr20 58925599 58925760 -13228122 + AluSg/x SINE Alu 128 288 -22 2252 91 0 23 chr20 58926011 58926184 -13227698 - AluSg1 SINE Alu -8 301 137 2319 104 7 3 chr20 58926184 58926483 -13227399 - AluSq SINE Alu -13 300 1 2252 91 0 23 chr20 58926483 58926617 -13227265 - AluSg1 SINE Alu -172 137 1 596 247 111 57 chr20 58926877 58927246 -13226636 - L1ME4a LINE L1 -224 5897 5509 375 23 0 0 chr20 58927262 58927306 -13226576 + (TTA)n Simple_repeat Simple_repeat 2 45 0 1611 172 27 0 chr20 58927327 58927588 -13226294 - AluJb SINE Alu -43 269 2 464 222 10 0 chr20 58927590 58927689 -13226193 - L1MD3 LINE L1 -164 7831 7732 241 169 169 36 chr20 58927693 58927776 -13226106 - L1MC/D LINE L1 -1984 5824 5731 2139 119 16 0 chr20 58927779 58928082 -13225800 - AluSp SINE Alu -5 308 1 327 65 0 0 chr20 58928434 58928480 -13225402 + (TC)n Simple_repeat Simple_repeat 1 46 0 237 33 0 0 chr20 58928503 58928533 -13225349 + (CA)n Simple_repeat Simple_repeat 1 30 0 249 313 88 12 chr20 58928588 58928748 -13225134 + L1P5 LINE L1 5259 5430 -721 566 198 207 26 chr20 58929253 58929323 -13224559 + ORSL DNA AcHobo 1 57 -218 1384 146 3 140 chr20 58929323 58929501 -13224381 + AluJo SINE Alu 1 111 -191 2542 54 3 0 chr20 58929501 58929796 -13224086 + AluSp SINE Alu 1 296 -17 1384 146 3 140 chr20 58929796 58929959 -13223923 + AluJo SINE Alu 111 295 -7 566 198 207 26 chr20 58929959 58930115 -13223767 + ORSL DNA AcHobo 57 268 -7 644 171 0 9 chr20 58931170 58931275 -13222607 - FLAM_A SINE Alu -37 105 2 2215 109 0 0 chr20 58931616 58931929 -13221953 - AluSx SINE Alu 0 313 1 2420 95 3 0 chr20 58932300 58932596 -13221286 + AluSp SINE Alu 1 297 -16 475 100 14 0 chr20 58933196 58933266 -13220616 + AluJo/FLAM SINE Alu 58 128 -184 1808 108 116 0 chr20 58933266 58933517 -13220365 - AluSx SINE Alu -19 293 14 370 286 192 5 chr20 58933561 58933785 -13220097 - L2 LINE L2 -81 3232 2967 918 259 92 13 chr20 58933820 58934059 -13219823 - L1MC/D LINE L1 -2128 5680 5461 1990 146 4 0 chr20 58934059 58934340 -13219542 + AluSx SINE Alu 11 292 -20 918 259 92 13 chr20 58934340 58934404 -13219478 - L1MC/D LINE L1 -2347 5461 5403 2300 105 3 3 chr20 58934404 58934717 -13219165 - AluSq SINE Alu 0 313 1 918 259 92 13 chr20 58934717 58934728 -13219154 - L1MC/D LINE L1 -2405 5403 5340 2321 93 0 0 chr20 58934811 58935101 -13218781 - AluSg SINE Alu -16 294 5 2336 92 3 3 chr20 58935138 58935431 -13218451 - AluSc SINE Alu -16 293 1 486 198 63 24 chr20 58935601 58935727 -13218155 - L1ME1 LINE L1 -5 6161 6031 1218 174 43 43 chr20 58935772 58936001 -13217881 - AluJo SINE Alu -20 292 61 2477 89 0 3 chr20 58936001 58936305 -13217577 - AluSq SINE Alu -9 304 2 1218 174 43 43 chr20 58936305 58936351 -13217531 - AluJo SINE Alu -250 62 17 308 313 61 37 chr20 58936357 58936571 -13217311 - L1MC/D LINE L1 -1029 5117 4899 444 196 35 96 chr20 58936669 58936795 -13217087 - L1MC4 LINE L1 -1339 6983 1982 238 147 29 0 chr20 58936802 58936870 -13217012 + (TA)n Simple_repeat Simple_repeat 1 70 0 302 224 15 15 chr20 58936870 58936888 -13216994 - L1MC4 LINE L1 -4352 2074 2057 182 61 0 30 chr20 58936888 58936921 -13216961 + (TA)n Simple_repeat Simple_repeat 2 33 0 302 224 15 15 chr20 58936921 58936969 -13216913 - L1MC4 LINE L1 -4368 2058 2008 * 324 221 0 96 chr20 58936960 58937064 -13216818 - L1MC4 LINE L1 -1337 6705 6612 251 83 0 21 chr20 58937064 58937112 -13216770 + (TA)n Simple_repeat Simple_repeat 1 47 0 2023 136 0 7 chr20 58937117 58937403 -13216479 - AluSx SINE Alu -24 288 5 1414 204 136 44 chr20 58937477 58937934 -13215948 - MLT1D LTR MaLR -4 501 3 1002 158 11 33 chr20 58937945 58938118 -13215764 - AluJo SINE Alu -10 302 132 2013 130 10 17 chr20 58938118 58938448 -13215434 - AluSx SINE Alu 0 312 1 479 357 116 3 chr20 58938646 58938940 -13214942 - L1M4 LINE L1 -2661 3485 3159 912 67 0 0 chr20 58938945 58939065 -13214817 + (TTCC)n Simple_repeat Simple_repeat 4 123 0 1209 109 11 35 chr20 58939066 58939224 -13214658 - AluSc SINE Alu -20 289 134 2730 38 0 10 chr20 58939224 58939538 -13214344 - AluYa5 SINE Alu 0 311 1 1209 109 11 35 chr20 58939538 58939553 -13214329 - AluSc SINE Alu -175 134 120 610 323 159 20 chr20 58939560 58939652 -13214230 - L1M4 LINE L1 -3000 3146 3068 2463 77 3 3 chr20 58939652 58939963 -13213919 - AluY SINE Alu 0 311 1 610 323 159 20 chr20 58939963 58940118 -13213764 - L1M4 LINE L1 -3078 3068 2936 1949 147 3 13 chr20 58940118 58940424 -13213458 + AluJb SINE Alu 1 303 -9 610 323 159 20 chr20 58940424 58940584 -13213298 - L1M4 LINE L1 -3210 2936 2681 252 100 40 0 chr20 58940935 58940985 -13212897 - AluSq SINE Alu 0 301 250 * 338 82 0 20 chr20 58940980 58941029 -13212853 + AluJ/FLAM SINE Alu 11 58 -244 2057 101 0 0 chr20 58941030 58941287 -13212595 - AluSq SINE Alu -56 257 1 397 295 63 67 chr20 58941288 58941573 -13212309 - L1 LINE L1 -1563 4583 4300 2120 128 14 0 chr20 58941761 58942058 -13211824 + AluSq SINE Alu 2 302 -11 1303 109 0 0 chr20 58942058 58942223 -13211659 + AluSg/x SINE Alu 132 296 -14 1537 156 77 21 chr20 58942223 58942563 -13211319 + L1MB8 LINE L1 5819 6177 -1 192 333 39 26 chr20 58942602 58942680 -13211202 - L2 LINE L2 -48 3265 3187 636 138 0 0 chr20 58942721 58942808 -13211074 - AluJ/FLAM SINE Alu -224 88 2 212 128 43 21 chr20 58942867 58942914 -13210968 - MER5A DNA MER1_type -114 75 28 664 179 81 0 chr20 58942937 58943060 -13210822 - FLAM_A SINE Alu 0 133 1 1959 156 20 0 chr20 58943299 58943600 -13210282 - AluSg SINE Alu -3 307 1 1377 171 46 66 chr20 58943602 58943906 -13209976 - AluJo SINE Alu -14 298 1 2267 179 138 66 chr20 58943971 58944037 -13209845 - MLT1E1 LTR MaLR 0 654 594 2521 89 0 9 chr20 58944037 58944352 -13209530 + AluSq SINE Alu 1 312 -1 2267 179 138 66 chr20 58944352 58944724 -13209158 - MLT1E1 LTR MaLR -60 594 157 2142 134 6 13 chr20 58944724 58945038 -13208844 - AluJb SINE Alu 0 312 1 2267 179 138 66 chr20 58945038 58945208 -13208674 - MLT1E1 LTR MaLR -497 157 1 270 273 219 0 chr20 58945335 58945463 -13208419 - L3 LINE CR1 -257 1320 1165 760 179 0 0 chr20 58945502 58945619 -13208263 - AluJb SINE Alu -194 118 2 2344 130 19 64 chr20 58945676 58945850 -13208032 - MER57A LTR ERV1 0 403 223 2414 103 0 3 chr20 58945850 58946160 -13207722 + AluSx SINE Alu 1 309 -3 2344 130 19 64 chr20 58946160 58946304 -13207578 - MER57A LTR ERV1 -180 223 106 2213 116 3 0 chr20 58946304 58946606 -13207276 - AluSx SINE Alu -5 307 5 2344 130 19 64 chr20 58946606 58946708 -13207174 - MER57A LTR ERV1 -297 106 1 955 228 46 54 chr20 58946807 58946886 -13206996 - MIR SINE MIR -3 259 181 2171 125 0 26 chr20 58946886 58947199 -13206683 - AluSx SINE Alu -7 305 1 955 228 46 54 chr20 58947199 58947378 -13206504 - MIR SINE MIR -81 181 3 257 340 95 29 chr20 58947444 58947685 -13206197 - L3 LINE CR1 -552 1025 769 1627 161 27 20 chr20 58947807 58948099 -13205783 + AluJb SINE Alu 1 294 -18 2171 126 10 10 chr20 58948099 58948409 -13205473 + AluSx SINE Alu 1 310 -2 491 152 36 0 chr20 58948444 58948556 -13205326 + GA-rich Low_complexity Low_complexity 1 116 0 1741 143 33 4 chr20 58948578 58948850 -13205032 + AluJb SINE Alu 1 280 -32 361 204 10 10 chr20 58948864 58948962 -13204920 + GA-rich Low_complexity Low_complexity 3 100 0 908 129 8 0 chr20 58948986 58949118 -13204764 + AluSq/x SINE Alu 1 133 -180 740 272 129 14 chr20 58949377 58949664 -13204218 + MER46C DNA MER2_type 9 328 -10 1727 150 0 4 chr20 58950143 58950397 -13203485 - AluJb SINE Alu -13 299 47 2374 88 0 0 chr20 58950422 58950718 -13203164 - AluSq SINE Alu -17 296 1 2132 130 0 7 chr20 58950771 58951070 -13202812 - AluSx SINE Alu -15 297 1 692 124 106 0 chr20 58951166 58951279 -13202603 - FLAM_C SINE Alu -10 133 9 459 184 11 0 chr20 58951320 58951407 -13202475 + MIR SINE MIR 156 243 -19 710 214 0 39 chr20 58951482 58951636 -13202246 + MER5B DNA MER1_type 26 173 -5 408 285 19 53 chr20 58952225 58952391 -13201491 - MER5A DNA MER1_type -2 187 7 196 311 104 28 chr20 58952443 58952549 -13201333 - MER5A DNA MER1_type -29 160 47 1893 139 3 23 chr20 58952581 58952890 -13200992 - AluJb SINE Alu -4 308 6 21 0 0 0 chr20 58952898 58952919 -13200963 + AT_rich Low_complexity Low_complexity 1 21 0 1725 107 0 45 chr20 58953007 58953097 -13200785 + AluSx SINE Alu 56 149 -163 2372 75 17 0 chr20 58953097 58953389 -13200493 + AluSq SINE Alu 1 297 -16 1725 107 0 45 chr20 58953389 58953542 -13200340 + AluSx SINE Alu 149 288 -24 2203 131 0 6 chr20 58953566 58953880 -13200002 + AluSx SINE Alu 1 312 0 1042 178 0 40 chr20 58954626 58954828 -13199054 - AluJo SINE Alu -31 281 88 2227 83 0 43 chr20 58954890 58955216 -13198666 + AluSx SINE Alu 1 312 0 651 253 19 6 chr20 58955582 58955740 -13198142 - MER5B DNA MER1_type -1 177 18 403 271 118 71 chr20 58955800 58955970 -13197912 - MER5B DNA MER1_type 0 178 1 682 130 26 97 chr20 58957058 58957212 -13196670 + AluJb SINE Alu 148 290 -22 2192 72 54 4 chr20 58957220 58957499 -13196383 + AluSq SINE Alu 2 294 -19 195 42 0 0 chr20 58957516 58957540 -13196342 + (TA)n Simple_repeat Simple_repeat 2 25 0 324 0 0 0 chr20 58957572 58957608 -13196274 + (TA)n Simple_repeat Simple_repeat 2 37 0 2515 75 0 3 chr20 58957608 58957913 -13195969 - AluSc SINE Alu -5 304 1 1877 163 7 23 chr20 58957950 58958257 -13195625 - AluJo SINE Alu -10 302 1 897 154 0 29 chr20 58958339 58958514 -13195368 + L1MB7 LINE L1 5996 6165 -19 788 168 0 8 chr20 58958533 58958658 -13195224 + AluJb SINE Alu 2 125 -187 27 73 0 0 chr20 58958661 58958716 -13195166 + AT_rich Low_complexity Low_complexity 1 55 0 784 170 24 164 chr20 58958734 58958788 -13195094 - MER33 DNA MER1_type -2262 323 263 2453 78 3 0 chr20 58958788 58959084 -13194798 - AluSp SINE Alu -16 297 1 784 170 24 164 chr20 58959084 58959133 -13194749 - MER33 DNA MER1_type -2322 263 209 2287 127 0 0 chr20 58959133 58959440 -13194442 + AluSx SINE Alu 1 307 -5 784 170 24 164 chr20 58959440 58959511 -13194371 - MER33 DNA MER1_type -2376 209 130 856 123 0 36 chr20 58959511 58959649 -13194233 + FLAM_C SINE Alu 1 133 0 784 170 24 164 chr20 58959649 58959843 -13194039 - MER33 DNA MER1_type -2455 130 5 1845 157 34 3 chr20 58960893 58961187 -13192695 + AluJb SINE Alu 1 303 -9 453 297 122 13 chr20 58961300 58961529 -13192353 - L2 LINE L2 -209 3063 2810 2337 100 7 3 chr20 58961679 58961980 -13191902 - AluSx SINE Alu -9 303 2 527 266 37 11 chr20 58961983 58962171 -13191711 + Charlie8 DNA MER1_type 312 504 -1913 2196 116 3 3 chr20 58962264 58962566 -13191316 + AluSq SINE Alu 1 302 -11 941 120 0 0 chr20 58962635 58962760 -13191122 - FLAM_C SINE Alu -8 125 1 1034 158 13 0 chr20 58963177 58963335 -13190547 + FRAM SINE Alu 5 164 -12 245 215 76 0 chr20 58963349 58963428 -13190454 - L2 LINE L2 -626 2688 2604 2295 109 0 7 chr20 58963709 58964013 -13189869 + AluSx SINE Alu 1 302 -10 2060 138 3 0 chr20 58964019 58964310 -13189572 + AluSx SINE Alu 1 292 -20 196 241 19 0 chr20 58964620 58964674 -13189208 - MER5B DNA MER1_type -3 175 121 349 165 0 44 chr20 58964680 58964940 -13188942 + AluJo SINE Alu 1 301 -1 449 186 29 20 chr20 58964947 58965049 -13188833 - MER5B DNA MER1_type -49 129 27 275 296 23 0 chr20 58965037 58965125 -13188757 - L2 LINE L2 -569 2745 2656 * 2426 92 0 0 chr20 58965163 58965458 -13188424 - AluSq SINE Alu -18 295 1 656 324 44 0 chr20 58965461 58965733 -13188149 - L1MC4a LINE L1 -1923 5885 5602 248 214 0 0 chr20 58965734 58965776 -13188106 - 5S rRNA rRNA -79 42 1 1058 173 93 13 chr20 58966195 58966432 -13187450 - L1MB8 LINE L1 0 6178 5923 721 270 83 16 chr20 58966450 58966702 -13187180 + Charlie8 DNA MER1_type 8 276 -2141 2233 110 0 7 chr20 58966820 58967111 -13186771 + AluSx SINE Alu 9 297 -15 234 254 62 77 chr20 58967328 58967458 -13186424 - MIR SINE MIR -61 147 20 238 288 96 0 chr20 58967542 58967615 -13186267 - MLT1H LTR MaLR 0 567 488 289 239 53 11 chr20 58967626 58967755 -13186127 - MLT1H LTR MaLR -167 375 245 22 35 0 0 chr20 58967797 58967826 -13186056 + AT_rich Low_complexity Low_complexity 1 29 0 1235 62 0 57 chr20 58967826 58967982 -13185900 - L1MA1 LINE L1 0 6302 6156 2440 107 0 0 chr20 58967982 58968291 -13185591 - AluSx SINE Alu -3 309 1 1235 62 0 57 chr20 58968291 58968311 -13185571 - L1MA1 LINE L1 -146 6156 6136 2044 141 3 3 chr20 58968313 58968611 -13185271 - AluJb SINE Alu -12 300 3 5547 134 40 28 chr20 58968627 58969019 -13184863 - L1PB1 LINE L1 0 6151 5765 2512 51 0 19 chr20 58969019 58969331 -13184551 - AluY SINE Alu -5 306 1 5547 134 40 28 chr20 58969331 58970317 -13183565 - L1PB1 LINE L1 -386 5765 4737 2289 122 3 0 chr20 58970317 58970628 -13183254 - AluSq SINE Alu -1 312 1 5547 134 40 28 chr20 58970628 58971250 -13182632 - L1PB1 LINE L1 -1414 4737 4124 357 91 0 0 chr20 58971245 58971300 -13182582 - L1MA1 LINE L1 -157 6145 6091 * 584 273 35 17 chr20 58971304 58971560 -13182322 - MLT1H LTR MaLR -309 240 10 726 257 142 55 chr20 58971560 58971695 -13182187 - L2 LINE L2 -28 3285 3163 2498 73 0 10 chr20 58971695 58972009 -13181873 - AluY SINE Alu 0 311 1 726 257 142 55 chr20 58972009 58972254 -13181628 - L2 LINE L2 -150 3163 2872 1139 140 35 0 chr20 58972326 58972497 -13181385 + AluJo SINE Alu 119 295 -17 2652 195 52 73 chr20 58972497 58972751 -13181131 - L1MB7 LINE L1 -20 6164 5906 2152 134 0 0 chr20 58972751 58973042 -13180840 - AluSx SINE Alu -21 291 1 2652 195 52 73 chr20 58973042 58973248 -13180634 - L1MB7 LINE L1 -278 5906 5697 2430 82 0 7 chr20 58973248 58973553 -13180329 - AluY SINE Alu -8 303 1 2170 115 0 20 chr20 58973553 58973857 -13180025 - AluSx SINE Alu -12 300 3 2652 195 52 73 chr20 58973857 58973923 -13179959 - L1MB7 LINE L1 -486 5698 5632 2001 159 0 9 chr20 58973923 58974238 -13179644 - AluJo SINE Alu 0 312 1 2652 195 52 73 chr20 58974238 58974446 -13179436 - L1MB7 LINE L1 -552 5632 5443 837 264 20 30 chr20 58974495 58974790 -13179092 - L2 LINE L2 -640 2674 2383 225 0 0 0 chr20 58974794 58974819 -13179063 + (T)n Simple_repeat Simple_repeat 1 25 0 1464 189 46 11 chr20 58975417 58975702 -13178180 - AluJb SINE Alu -17 295 1 845 245 0 0 chr20 58975730 58975914 -13177968 + MIR SINE MIR 31 214 -48 889 111 0 44 chr20 58975949 58976084 -13177798 + FLAM_C SINE Alu 5 133 -10 2273 117 3 0 chr20 58977145 58977445 -13176437 - AluSx SINE Alu -11 301 1 589 264 117 0 chr20 58977553 58977750 -13176132 + MER102a DNA MER1_type 71 290 -40 1631 146 114 29 chr20 58977771 58977912 -13175970 - AluJb SINE Alu -7 305 177 2421 85 7 3 chr20 58977912 58978218 -13175664 - AluSc SINE Alu 0 309 3 1631 146 114 29 chr20 58978218 58978357 -13175525 - AluJb SINE Alu -135 177 1 438 171 24 0 chr20 58978452 58978534 -13175348 - MER53 DNA DNA 0 189 106 355 179 21 63 chr20 58978464 58978559 -13175323 + MER53 DNA DNA 23 113 -76 * 1958 83 4 0 chr20 58978592 58978833 -13175049 - AluSx SINE Alu -22 290 49 464 271 13 40 chr20 58978912 58979063 -13174819 + MIR SINE MIR 14 160 -102 233 75 25 0 chr20 58979552 58979592 -13174290 + (TC)n Simple_repeat Simple_repeat 1 41 0 2422 111 0 0 chr20 58980020 58980327 -13173555 + AluSx SINE Alu 1 307 -5 223 113 32 32 chr20 58980884 58980946 -13172936 + CT-rich Low_complexity Low_complexity 1 62 0 2117 112 27 14 chr20 58980972 58981266 -13172616 - AluSx SINE Alu -14 298 1 198 327 73 28 chr20 58981427 58981675 -13172207 - L2 LINE L2 -167 3105 2847 645 276 105 64 chr20 58981959 58982415 -13171467 + Charlie8 DNA MER1_type 3 479 -1938 248 295 3 0 chr20 58983008 58983092 -13170790 + MIR SINE MIR 66 144 -64 762 248 253 35 chr20 58983093 58983548 -13170334 - MLT1H1 LTR MaLR -1 554 1 1680 199 17 65 chr20 58983604 58983756 -13170126 + L1ME3 LINE L1 5448 5606 -558 2245 89 31 3 chr20 58983756 58984047 -13169835 - AluSx SINE Alu -13 299 1 1680 199 17 65 chr20 58984047 58984178 -13169704 + L1ME3 LINE L1 5606 5742 -422 2301 99 0 26 chr20 58984178 58984480 -13169402 + AluSx SINE Alu 2 295 -17 1680 199 17 65 chr20 58984480 58984658 -13169224 + L1ME3 LINE L1 5742 5888 -276 805 169 0 0 chr20 58984659 58984777 -13169105 + FLAM_C SINE Alu 1 118 -25 1060 214 60 14 chr20 58984794 58985075 -13168807 + L1ME3 LINE L1 5868 6161 -1 39 0 0 0 chr20 58985094 58985133 -13168749 + AT_rich Low_complexity Low_complexity 1 39 0 638 172 6 124 chr20 58985851 58986020 -13167862 - Charlie8 DNA MER1_type -2181 236 88 426 250 0 52 chr20 58986129 58986265 -13167617 + MIR SINE MIR 48 176 -86 842 162 7 15 chr20 58986365 58986501 -13167381 - AluJo SINE Alu -177 135 1 2262 118 3 0 chr20 58986714 58987019 -13166863 + AluSx SINE Alu 1 306 -6 275 250 165 45 chr20 58987390 58987590 -13166292 - MER102a DNA MER1_type -15 315 92 397 107 13 27 chr20 58987603 58987678 -13166204 - L1MC3 LINE L1 -13 7772 7699 386 118 15 15 chr20 58987694 58987762 -13166120 - AluJo SINE Alu -168 134 67 1742 201 60 58 chr20 58987765 58987809 -13166073 - L1MD3 LINE L1 -102 7893 7851 1832 170 23 0 chr20 58987809 58988109 -13165773 + AluJb SINE Alu 1 307 -5 1742 201 60 58 chr20 58988109 58988127 -13165755 - L1MD3 LINE L1 -144 7851 7835 210 37 0 0 chr20 58988127 58988154 -13165728 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1742 201 60 58 chr20 58988154 58988592 -13165290 - L1MD3 LINE L1 -160 7835 7391 897 213 99 12 chr20 58988588 58988841 -13165041 - L1MC3 LINE L1 -752 7033 6759 * 2142 124 0 3 chr20 58988849 58989147 -13164735 - AluSx SINE Alu -15 297 1 208 348 36 0 chr20 58989178 58989290 -13164592 - MIR SINE MIR -128 134 19 23 0 0 0 chr20 58989590 58989613 -13164269 + AT_rich Low_complexity Low_complexity 1 23 0 2151 125 3 0 chr20 58989617 58989913 -13163969 + AluSx SINE Alu 1 297 -15 321 257 10 10 chr20 58989916 58990017 -13163865 - MLT1E LTR MaLR -492 101 1 353 302 54 7 chr20 58990031 58990217 -13163665 - MIR3 SINE MIR -62 200 8 2487 89 0 0 chr20 58990360 58990662 -13163220 - AluSx SINE Alu -10 302 1 2189 137 0 0 chr20 58991687 58991986 -13161896 + AluJb SINE Alu 1 299 -13 454 210 30 0 chr20 58991986 58992086 -13161796 + Charlie8 DNA MER1_type 90 192 -2225 304 295 71 0 chr20 58992114 58992226 -13161656 - L1ME3 LINE L1 -11 6151 6032 1989 124 57 0 chr20 58992266 58992548 -13161334 + AluSx SINE Alu 1 298 -14 308 169 52 0 chr20 58992548 58992625 -13161257 + Charlie8 DNA MER1_type 195 275 -2142 358 180 0 0 chr20 58993249 58993310 -13160572 - MLT1D LTR MaLR -2 503 443 237 191 0 0 chr20 58993311 58993353 -13160529 + MER57A LTR ERV1 296 337 -66 2189 117 0 0 chr20 58993383 58993673 -13160209 - AluSx SINE Alu -18 294 5 1997 172 69 37 chr20 58993677 58994113 -13159769 - MLT1D LTR MaLR -55 450 1 822 162 113 43 chr20 58994512 58994697 -13159185 - MER20 DNA MER1_type -3 216 19 339 273 149 0 chr20 58994701 58994822 -13159060 + MIR SINE MIR 18 156 -106 298 95 0 95 chr20 58995324 58995338 -13158544 - FLAM SINE Alu -171 131 117 207 0 0 0 chr20 58995338 58995361 -13158521 + (TTCA)n Simple_repeat Simple_repeat 3 25 0 298 95 0 95 chr20 58995361 58995409 -13158473 - FLAM SINE Alu -185 117 75 2467 89 3 0 chr20 58995409 58995713 -13158169 - AluSx SINE Alu -6 306 2 2381 220 39 9 chr20 58995720 58996283 -13157599 - L1MB7 LINE L1 -54 6130 5551 282 217 0 14 chr20 58996287 58996356 -13157526 - L1M4 LINE L1 -582 5602 5535 1799 76 0 5 chr20 58996365 58996589 -13157293 - AluSc SINE Alu -12 297 75 1376 87 0 0 chr20 59046590 59046763 -13107119 - AluY SINE Alu -138 173 1 237 261 115 31 chr20 59046991 59047121 -13106761 + Charlie8 DNA MER1_type 296 436 -1981 186 43 0 0 chr20 59047128 59047151 -13106731 + (TTTTC)n Simple_repeat Simple_repeat 2 24 0 2168 89 0 0 chr20 59047155 59047435 -13106447 - AluSg SINE Alu -30 280 1 254 269 207 69 chr20 59047524 59047669 -13106213 + MIR SINE MIR 28 192 -70 1632 158 66 4 chr20 59047954 59048227 -13105655 - AluJo SINE Alu -22 290 1 743 306 19 0 chr20 59048227 59048433 -13105449 - MIR SINE MIR 0 262 53 738 122 19 0 chr20 59048528 59048635 -13105247 + FLAM_C SINE Alu 3 111 -32 339 113 0 0 chr20 59049189 59049242 -13104640 + (CA)n Simple_repeat Simple_repeat 2 54 0 231 114 0 0 chr20 59049353 59049388 -13104494 + (TTCA)n Simple_repeat Simple_repeat 4 38 0 924 111 0 0 chr20 59049652 59049778 -13104104 + AluSq/x SINE Alu 6 131 -181 2113 132 3 0 chr20 59049785 59050088 -13103794 + AluSx SINE Alu 4 307 -5 478 312 51 23 chr20 59050662 59050729 -13103153 - MIR SINE MIR -1 261 197 1921 128 4 11 chr20 59050729 59051010 -13102872 - AluSx SINE Alu -18 294 16 478 312 51 23 chr20 59051010 59051157 -13102725 - MIR SINE MIR -65 197 41 1575 151 0 8 chr20 59051157 59051396 -13102486 - AluJo SINE Alu -75 237 1 41 58 0 0 chr20 59051403 59051472 -13102410 + AT_rich Low_complexity Low_complexity 1 69 0 2255 95 0 0 chr20 59052050 59052345 -13101537 - AluSq SINE Alu -14 299 5 396 249 3 19 chr20 59052655 59052764 -13101118 + MIR SINE MIR 60 171 -37 237 319 143 0 chr20 59053309 59053400 -13100482 - L2 LINE L2 -1 3271 3168 282 241 11 69 chr20 59053624 59053639 -13100243 - MIR3 SINE MIR -41 167 153 2257 101 0 3 chr20 59053639 59053937 -13099945 - AluSx SINE Alu -15 297 1 282 241 11 69 chr20 59053937 59054008 -13099874 - MIR3 SINE MIR -55 153 86 1805 167 17 0 chr20 59054188 59054476 -13099406 - AluJo SINE Alu -19 293 1 569 319 0 6 chr20 59054476 59054639 -13099243 - MIR SINE MIR -15 247 86 189 343 15 0 chr20 59054879 59054946 -13098936 + L2 LINE L2 2992 3059 -213 1814 152 3 17 chr20 59055081 59055377 -13098505 + AluJb SINE Alu 1 292 -20 1595 185 54 14 chr20 59055387 59055684 -13098198 + AluJo SINE Alu 1 309 -3 327 282 34 26 chr20 59055775 59055892 -13097990 - MIR SINE MIR -60 202 85 599 272 63 6 chr20 59056307 59056465 -13097417 - MIR SINE MIR -80 182 16 267 269 0 0 chr20 59057500 59057567 -13096315 + MIR SINE MIR 57 123 -139 510 180 180 0 chr20 59057572 59057672 -13096210 + FLAM_C SINE Alu 2 119 -14 315 264 0 0 chr20 59057737 59057809 -13096073 + L2 LINE L2 2748 2819 -495 2397 77 7 0 chr20 59057823 59058133 -13095749 - AluSx SINE Alu 0 312 1 1805 119 0 0 chr20 59058360 59058604 -13095278 - AluSx SINE Alu -66 246 3 686 163 141 0 chr20 59058713 59058848 -13095034 - MIR SINE MIR -32 230 77 1834 139 23 10 chr20 59058984 59059286 -13094596 + AluJb SINE Alu 5 310 -2 1091 174 0 0 chr20 59059326 59059504 -13094378 + FRAM SINE Alu 1 175 -1 516 317 100 7 chr20 59059513 59059839 -13094043 - L2 LINE L2 -208 3064 2709 920 92 8 23 chr20 59061069 59061200 -13092682 + AluJo SINE Alu 6 134 -178 589 263 116 11 chr20 59061389 59061579 -13092303 - MIR SINE MIR -2 260 51 201 146 62 42 chr20 59061602 59061650 -13092232 + L2 LINE L2 3133 3181 -91 397 291 62 50 chr20 59062942 59063200 -13090682 + L2 LINE L2 2931 3191 -81 250 344 49 16 chr20 59063265 59063387 -13090495 - MIR SINE MIR -51 211 86 189 0 0 0 chr20 59063586 59063607 -13090275 + (TG)n Simple_repeat Simple_repeat 2 22 0 1890 150 27 0 chr20 59063607 59063901 -13089981 - AluSq SINE Alu -11 302 1 2133 121 16 0 chr20 59064354 59064659 -13089223 - AluSx SINE Alu -2 310 1 310 265 12 0 chr20 59064828 59064911 -13088971 - MER20 DNA MER1_type -3 216 133 593 196 88 0 chr20 59065087 59065235 -13088647 - MER20 DNA MER1_type -58 161 1 231 314 14 0 chr20 59065246 59065316 -13088566 + L1MC5 LINE L1 7833 7903 -58 288 272 19 58 chr20 59065377 59065480 -13088402 + MIR SINE MIR 19 117 -145 397 317 88 26 chr20 59065631 59065858 -13088024 - MIR SINE MIR -14 248 8 208 260 20 0 chr20 59065878 59065928 -13087954 + L2 LINE L2 3211 3261 -11 300 242 16 70 chr20 59066465 59066651 -13087231 + (TCTCTG)n Simple_repeat Simple_repeat 2 177 0 239 175 0 0 chr20 59068018 59068058 -13085824 - L2 LINE L2 -11 3302 3263 217 254 45 30 chr20 59068025 59068092 -13085790 - MIR SINE MIR -12 250 183 * 2265 90 3 0 chr20 59068351 59068650 -13085232 - AluSp SINE Alu -13 300 1 606 174 107 13 chr20 59068660 59068809 -13085073 - MIR SINE MIR -46 216 54 180 0 0 0 chr20 59069325 59069345 -13084537 + (TTCA)n Simple_repeat Simple_repeat 1 20 0 1206 149 29 47 chr20 59069353 59069539 -13084343 + MER2 DNA MER2_type 1 182 -163 2178 118 0 0 chr20 59069539 59069843 -13084039 + AluSx SINE Alu 1 304 -8 1206 149 29 47 chr20 59069843 59069932 -13083950 + MER2 DNA MER2_type 182 271 -74 1340 108 19 28 chr20 59069932 59070145 -13083737 - AluJo SINE Alu 0 312 102 198 0 0 0 chr20 59070145 59070167 -13083715 + (TTA)n Simple_repeat Simple_repeat 2 23 0 1655 131 10 38 chr20 59070170 59070461 -13083421 - AluJo SINE Alu -29 283 1 385 149 15 0 chr20 59070468 59070535 -13083347 + MER2 DNA MER2_type 278 345 0 247 298 66 44 chr20 59070777 59071005 -13082877 - L2 LINE L2 -549 2765 2533 1597 250 55 21 chr20 59071012 59071077 -13082805 - L1MD2 LINE L1 -5 6354 6293 1745 164 17 3 chr20 59071077 59071364 -13082518 + AluJo SINE Alu 1 291 -21 1597 250 55 21 chr20 59071364 59071810 -13082072 - L1MD2 LINE L1 -66 6293 5826 2141 117 10 0 chr20 59071813 59072122 -13081760 + AluSx SINE Alu 1 312 0 810 104 0 0 chr20 59072127 59072233 -13081649 + AluJb SINE Alu 196 301 -11 247 103 26 0 chr20 59072234 59072273 -13081609 - L2 LINE L2 -771 2543 2504 247 366 24 0 chr20 59072401 59072483 -13081399 - L2 LINE L2 -17 3296 3213 395 336 94 58 chr20 59072999 59073066 -13080816 - HAL1 LINE L1 -1295 1212 1149 1460 152 4 40 chr20 59073066 59073343 -13080539 - AluJo SINE Alu -5 307 41 395 336 94 58 chr20 59073343 59073617 -13080265 - HAL1 LINE L1 -1358 1149 859 2106 128 34 0 chr20 59074052 59074348 -13079534 - AluSx SINE Alu -5 307 2 2338 120 0 0 chr20 59074468 59074777 -13079105 - AluSx SINE Alu 0 312 1 349 233 11 0 chr20 59075359 59075449 -13078433 - MER45A DNA AcHobo -28 150 60 275 302 23 12 chr20 59075512 59075598 -13078284 + MIR SINE MIR 93 179 -83 1989 101 8 15 chr20 59075659 59075927 -13077955 - AluSx SINE Alu -11 301 36 2399 101 3 0 chr20 59076031 59076338 -13077544 + AluSx SINE Alu 1 308 -4 264 302 43 55 chr20 59077254 59077416 -13076466 + MIR SINE MIR 32 192 -63 412 298 209 0 chr20 59077604 59077839 -13076043 - Charlie8 DNA MER1_type -2133 284 1 437 306 57 6 chr20 59077968 59078125 -13075757 + MIR SINE MIR 23 187 -75 1859 179 87 94 chr20 59078263 59078562 -13075320 - L1MC3 LINE L1 -25 7760 7465 1759 136 0 103 chr20 59078562 59078851 -13075031 - AluJo SINE Alu -8 304 53 2257 123 0 0 chr20 59078851 59079152 -13074730 + AluSx SINE Alu 1 301 -11 1759 136 0 103 chr20 59079152 59079201 -13074681 - AluJo SINE Alu -259 53 1 1859 179 87 94 chr20 59079201 59079465 -13074417 - L1MC3 LINE L1 -320 7465 7201 252 200 46 31 chr20 59079468 59079533 -13074349 - MLT1F1 LTR MaLR -434 133 68 1757 154 14 11 chr20 59079641 59079921 -13073961 - AluJo SINE Alu -11 301 21 241 264 14 42 chr20 59079955 59080027 -13073855 + MIR SINE MIR 39 108 -154 428 275 42 12 chr20 59080116 59080283 -13073599 - MLT1J LTR MaLR -92 419 248 230 196 18 18 chr20 59080302 59080358 -13073524 - MIR SINE MIR -113 149 94 1007 174 23 46 chr20 59080921 59080962 -13072920 + MER58A DNA MER1_type 9 49 -2371 2516 95 0 0 chr20 59080962 59081268 -13072614 - AluSx SINE Alu -6 306 1 1007 174 23 46 chr20 59081268 59081444 -13072438 + MER58A DNA MER1_type 49 221 -3 522 266 49 15 chr20 59081805 59082008 -13071874 - Charlie8 DNA MER1_type -2205 212 3 553 272 51 25 chr20 59082734 59082969 -13070913 - MLT1K LTR MaLR -4 584 344 2293 98 3 16 chr20 59083197 59083504 -13070378 + AluSx SINE Alu 1 303 -9 2571 77 0 3 chr20 59083508 59083820 -13070062 + AluY SINE Alu 1 311 0 302 343 126 11 chr20 59084075 59084250 -13069632 - L3 LINE CR1 -1156 421 227 385 238 59 141 chr20 59085517 59085837 -13068045 + L2 LINE L2 2938 3231 -41 508 259 24 12 chr20 59086280 59086450 -13067432 + MER5B DNA MER1_type 3 174 -4 2090 111 0 54 chr20 59086702 59087017 -13066865 + AluSx SINE Alu 1 298 -14 2086 138 3 0 chr20 59087170 59087468 -13066414 - AluSx SINE Alu -11 301 3 32 0 0 0 chr20 59087911 59087943 -13065939 + AT_rich Low_complexity Low_complexity 1 32 0 782 169 0 0 chr20 59087943 59088061 -13065821 - FLAM_C SINE Alu -23 120 3 806 203 14 0 chr20 59088798 59088941 -13064941 + AluJb SINE Alu 138 282 -30 1901 157 20 23 chr20 59089003 59089309 -13064573 + AluJb SINE Alu 1 305 -7 2305 121 0 0 chr20 59089382 59089689 -13064193 - AluSx SINE Alu -5 307 1 1557 143 34 45 chr20 59089719 59089985 -13063897 - AluJo SINE Alu -15 297 35 554 259 68 79 chr20 59090002 59090369 -13063513 - L1ME3A LINE L1 -10 6160 5798 2331 115 0 0 chr20 59090454 59090758 -13063124 + AluSx SINE Alu 1 304 -8 260 275 84 30 chr20 59090956 59091123 -13062759 + MIR SINE MIR 17 192 -70 838 141 0 30 chr20 59091704 59091839 -13062043 - FLAM_C SINE Alu -2 131 1 1805 174 14 0 chr20 59092171 59092465 -13061417 + AluJo SINE Alu 1 298 -14 522 267 151 23 chr20 59092725 59092884 -13060998 + L1MC4a LINE L1 5314 5451 -2357 2192 132 3 0 chr20 59092884 59093180 -13060702 - AluSx SINE Alu -15 297 1 522 267 151 23 chr20 59093180 59093278 -13060604 + L1MC4a LINE L1 5451 5604 -2204 868 140 0 29 chr20 59093278 59093414 -13060468 + AluJb SINE Alu 163 294 -18 653 287 118 7 chr20 59093437 59093726 -13060156 + L1MC4a LINE L1 5612 5932 -1876 235 250 0 0 chr20 59093854 59093914 -13059968 + Charlie8 DNA MER1_type 88 147 -2270 319 273 0 0 chr20 59094029 59094106 -13059776 + Charlie8 DNA MER1_type 2338 2414 -3 1209 186 81 10 chr20 59094347 59094642 -13059240 + L1M4 LINE L1 3666 3981 -2165 493 217 17 67 chr20 59095651 59095771 -13058111 + MER5B DNA MER1_type 64 177 -1 226 268 18 0 chr20 59095965 59096021 -13057861 + MLT1L LTR MaLR 112 168 -447 2295 103 0 13 chr20 59096592 59096893 -13056989 - AluSp SINE Alu -16 297 1 355 273 93 17 chr20 59096895 59097067 -13056815 - MER113 DNA MER1_type? -206 315 131 905 122 27 20 chr20 59097083 59097230 -13056652 + AluJb SINE Alu 141 288 -24 2436 80 7 0 chr20 59098158 59098457 -13055425 - AluSq SINE Alu -12 301 1 2025 115 0 51 chr20 59099297 59099611 -13054271 + AluY SINE Alu 5 302 -9 303 28 0 0 chr20 59101351 59101387 -13052495 + (A)n Simple_repeat Simple_repeat 1 36 0 2157 86 10 10 chr20 59105832 59106123 -13047759 + AluSq SINE Alu 1 291 -22 14693 118 84 29 chr20 59106379 59106781 -13047101 - Tigger3b DNA MER2_type -1797 1232 854 1505 165 75 0 chr20 59106781 59107047 -13046835 - AluJo SINE Alu -26 286 1 14693 118 84 29 chr20 59107047 59107162 -13046720 - Tigger3b DNA MER2_type -2175 854 747 2120 135 0 0 chr20 59107162 59107459 -13046423 + AluSx SINE Alu 1 297 -15 14693 118 84 29 chr20 59107459 59107557 -13046325 - Tigger3b DNA MER2_type -2282 747 656 1555 105 130 8 chr20 59107557 59107795 -13046087 + AluSg1 SINE Alu 29 295 -14 14693 118 84 29 chr20 59107795 59108159 -13045723 - Tigger3b DNA MER2_type -2373 656 1806 2231 83 13 20 chr20 59108159 59108460 -13045422 - AluSq SINE Alu -14 299 1 14693 118 84 29 chr20 59108460 59110125 -13043757 - Tigger3b DNA MER2_type -1222 1807 236 375 221 74 11 chr20 59110125 59110220 -13043662 + Tigger3b DNA MER2_type 2 102 -1129 969 177 55 6 chr20 59110230 59110411 -13043471 - MER8 DNA MER2_type 0 239 50 2189 90 10 51 chr20 59110417 59110729 -13043153 - AluSq SINE Alu -14 299 1 3609 156 76 67 chr20 59110739 59111668 -13042214 + Tigger3b DNA MER2_type 292 1229 -2 996 162 129 5 chr20 59111669 59111879 -13042003 - Tigger3b DNA MER2_type -995 236 1 234 0 0 0 chr20 59112541 59112567 -13041315 + (A)n Simple_repeat Simple_repeat 1 26 0 536 268 31 8 chr20 59114272 59114399 -13039483 - L2 LINE L2 -5 3267 3138 373 261 106 64 chr20 59114712 59114900 -13038982 + MIR SINE MIR 50 245 -17 1530 179 0 78 chr20 59115424 59115732 -13038150 - AluJb SINE Alu -23 289 6 306 0 0 0 chr20 59116073 59116107 -13037775 + (CAAAAA)n Simple_repeat Simple_repeat 3 36 0 2249 91 7 3 chr20 59117152 59117448 -13036434 + AluSc SINE Alu 3 299 -10 2179 65 36 42 chr20 59118183 59118489 -13035393 - AluY SINE Alu -6 305 2 2288 108 0 3 chr20 59118490 59118786 -13035096 - AluSq SINE Alu -18 295 1 1516 164 14 62 chr20 59118825 59119117 -13034765 - AluJo SINE Alu -34 278 1 198 71 0 0 chr20 59119359 59119387 -13034495 + (T)n Simple_repeat Simple_repeat 1 28 0 2520 70 0 3 chr20 59119712 59120011 -13033871 + AluY SINE Alu 1 298 -13 22 0 0 0 chr20 59120287 59120309 -13033573 + AT_rich Low_complexity Low_complexity 1 22 0 2173 99 33 7 chr20 59120309 59120613 -13033269 + AluSp SINE Alu 2 313 0 226 275 88 12 chr20 59120729 59120809 -13033073 - L2 LINE L2 -1 3271 3186 311 250 153 45 chr20 59121096 59121272 -13032610 + MLT1K LTR MaLR 387 581 -7 234 255 0 0 chr20 59121571 59121618 -13032264 + AluJ/monomer SINE Alu 5 51 -251 874 183 0 0 chr20 59121672 59121814 -13032068 + FRAM SINE Alu 13 154 -22 1660 189 14 17 chr20 59121876 59122173 -13031709 - AluJb SINE Alu -16 296 1 1001 190 91 15 chr20 59122416 59122679 -13031203 - L1 LINE L1 -973 5173 4891 260 79 26 0 chr20 59122678 59122716 -13031166 + L1PB4 LINE L1 6046 6084 -72 * 465 57 29 0 chr20 59122716 59122786 -13031096 - AluSp/q SINE Alu -2 311 240 2044 109 42 11 chr20 59123385 59123669 -13030213 - AluSx SINE Alu -19 293 1 2189 121 10 7 chr20 59124193 59124500 -13029382 + AluSx SINE Alu 5 312 0 21 0 0 0 chr20 59127315 59127336 -13026546 + AT_rich Low_complexity Low_complexity 1 21 0 535 311 223 6 chr20 59127441 59127913 -13025969 - L3 LINE CR1 -54 1523 950 23 0 0 0 chr20 59127920 59127943 -13025939 + AT_rich Low_complexity Low_complexity 1 23 0 1638 201 49 8 chr20 59128940 59129330 -13024552 + L1MB2 LINE L1 5657 6054 -117 260 96 96 0 chr20 59129323 59129375 -13024507 + L1MB3 LINE L1 6125 6181 -2 * 1046 171 101 62 chr20 59130413 59130670 -13023212 + AluJo SINE Alu 12 278 -34 352 266 32 0 chr20 59130670 59130764 -13023118 + L2 LINE L2 3217 3313 0 2216 95 51 0 chr20 59131216 59131511 -13022371 + AluSg SINE Alu 1 310 0 1764 103 95 0 chr20 59131526 59131789 -13022093 + AluSx SINE Alu 9 296 -16 454 277 71 33 chr20 59132159 59132343 -13021539 + MIR SINE MIR 30 220 -42 2495 151 139 32 chr20 59133328 59133798 -13020084 - MER21A LTR ERV1 -6 925 398 2096 125 0 13 chr20 59133798 59134101 -13019781 - AluSg SINE Alu -11 299 1 2495 151 139 32 chr20 59134101 59134127 -13019755 - MER21A LTR ERV1 -533 398 376 1204 183 69 16 chr20 59134141 59134387 -13019495 - MER21A LTR ERV1 -672 259 1 2294 107 0 0 chr20 59134733 59135033 -13018849 - AluSx SINE Alu -8 304 5 252 0 0 0 chr20 59136483 59136511 -13017371 + (CA)n Simple_repeat Simple_repeat 2 29 0 1946 137 10 0 chr20 59137038 59137345 -13016537 + AluSx SINE Alu 1 310 -2 190 235 12 141 chr20 59138467 59138552 -13015330 - L3 LINE CR1 -1 1576 1503 987 118 0 15 chr20 59138780 59138915 -13014967 - FLAM_C SINE Alu 0 133 1 461 281 195 66 chr20 59141603 59142594 -13011288 - L1M2 LINE L1 -5442 1407 542 306 280 138 77 chr20 59142906 59143217 -13010665 + L1M2 LINE L1 671 1000 -5849 1578 172 55 14 chr20 59144912 59145202 -13008680 - AluJo SINE Alu -10 302 1 24 32 0 0 chr20 59146180 59146211 -13007671 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr20 59148263 59148284 -13005598 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr20 59148623 59148651 -13005231 + AT_rich Low_complexity Low_complexity 1 28 0 970 167 33 0 chr20 59148837 59148987 -13004895 - AluJ SINE Alu -24 288 134 201 39 0 0 chr20 59149038 59149064 -13004818 + (TTA)n Simple_repeat Simple_repeat 2 27 0 784 173 0 23 chr20 59149064 59149197 -13004685 - AluJ SINE Alu -181 131 2 2430 52 17 0 chr20 59149608 59149899 -13003983 - AluY SINE Alu -15 296 1 2389 73 3 7 chr20 59149917 59150219 -13003663 + AluSp SINE Alu 1 301 -12 1585 126 159 4 chr20 59150578 59150849 -13003033 - AluYb8 SINE Alu -5 313 1 1895 120 25 4 chr20 59150849 59151124 -13002758 - AluSx SINE Alu -22 290 9 351 0 0 0 chr20 59151306 59151345 -13002537 + (TG)n Simple_repeat Simple_repeat 2 40 0 735 116 107 0 chr20 59152327 59152439 -13001443 + AluJb SINE Alu 2 125 -187 653 140 0 38 chr20 59152447 59152633 -13001249 + (TA)n Simple_repeat Simple_repeat 2 180 0 1306 170 26 4 chr20 59152650 59152880 -13001002 + AluSx SINE Alu 1 235 -77 2316 82 7 3 chr20 59153445 59153739 -13000143 + AluSg1 SINE Alu 1 295 -14 836 208 0 0 chr20 59153739 59153888 -12999994 + AluJb SINE Alu 134 282 -30 2017 132 10 0 chr20 59154115 59154404 -12999478 + AluSx SINE Alu 1 292 -20 2185 83 4 4 chr20 59154574 59154877 -12999005 - AluSc SINE Alu 0 303 1 2565 47 0 3 chr20 59154960 59155259 -12998623 - AluY SINE Alu -13 298 1 306 301 42 83 chr20 59155267 59155579 -12998303 - L1MC/D LINE L1 -2203 5605 5307 219 256 235 43 chr20 59155677 59155907 -12997975 - L2 LINE L2 -339 2975 2702 260 306 159 20 chr20 59156111 59156363 -12997519 - L1MC/D LINE L1 -2082 4064 3778 374 0 22 0 chr20 59156497 59156543 -12997339 + (TG)n Simple_repeat Simple_repeat 2 48 0 1305 192 0 42 chr20 59156565 59156826 -12997056 - AluJo SINE Alu -25 287 38 410 319 128 3 chr20 59157442 59157755 -12996127 + L2 LINE L2 2188 2539 -775 1936 138 7 17 chr20 59158009 59158146 -12995736 + AluSx SINE Alu 1 138 -174 2317 85 3 0 chr20 59158146 59158441 -12995441 + AluSp SINE Alu 1 296 -17 1936 138 7 17 chr20 59158441 59158599 -12995283 + AluSx SINE Alu 138 293 -19 1993 121 0 0 chr20 59158882 59159146 -12994736 - AluSc SINE Alu -45 264 1 1223 273 110 11 chr20 59159218 59159690 -12994192 + LTR33A LTR ERVL 5 523 0 2271 96 0 0 chr20 59160086 59160378 -12993504 - AluSg SINE Alu -18 292 1 1067 208 100 38 chr20 59161018 59161486 -12992396 - L1 LINE L1 -3832 3733 3236 2073 126 3 3 chr20 59161806 59162120 -12991762 + AluSx SINE Alu 1 314 0 1603 147 93 0 chr20 59162141 59162441 -12991441 - MER44D DNA MER2_type -8 601 4 2005 119 3 3 chr20 59162726 59163038 -12990844 + AluSx SINE Alu 1 312 0 373 304 22 0 chr20 59163237 59163329 -12990553 + MIR SINE MIR 2 95 -167 239 208 38 0 chr20 59163545 59163598 -12990284 - L1ME4a LINE L1 -194 5927 5873 284 349 8 8 chr20 59163602 59163731 -12990151 - L1ME4a LINE L1 -503 5618 5490 811 200 188 31 chr20 59164046 59164293 -12989589 + L1MA9 LINE L1 6036 6312 0 882 213 37 42 chr20 59165473 59165689 -12988193 + MER20 DNA MER1_type 1 215 -4 2139 91 24 0 chr20 59166795 59167082 -12986800 - AluY SINE Alu -17 294 1 759 68 0 3 chr20 59167541 59167775 -12986107 + AluY SINE Alu 1 311 0 406 247 71 46 chr20 59168482 59168649 -12985233 + L1ME LINE L1 5503 5676 -445 238 234 143 52 chr20 59168679 59168756 -12985126 - L2 LINE L2 -26 3246 3163 2432 72 0 0 chr20 59171965 59172257 -12981625 - AluSg SINE Alu -14 296 5 520 325 37 0 chr20 59173541 59173732 -12980150 - LTR67 LTR ERVL -357 200 3 2075 132 0 13 chr20 59173758 59174068 -12979814 - AluSx SINE Alu -5 307 2 1506 203 0 30 chr20 59174145 59174446 -12979436 - AluJo SINE Alu -20 292 1 561 305 133 21 chr20 59174591 59174954 -12978928 - L2 LINE L2 -175 3138 2731 233 300 17 0 chr20 59174969 59175029 -12978853 - MIR SINE MIR -200 62 2 1789 103 29 0 chr20 59175246 59175489 -12978393 + AluSp SINE Alu 47 296 -17 414 134 61 49 chr20 59175642 59175724 -12978158 - AluSg/x SINE Alu -19 290 208 625 273 142 56 chr20 59175954 59176460 -12977422 - L2 LINE L2 -5 3308 2847 2363 106 0 3 chr20 59176460 59176763 -12977119 + AluSx SINE Alu 1 302 -10 625 273 142 56 chr20 59176763 59176902 -12976980 - L2 LINE L2 -466 2847 2721 1626 166 68 113 chr20 59176902 59177200 -12976682 - MLT1D LTR MaLR 0 505 240 2538 85 0 0 chr20 59177200 59177507 -12976375 - AluSx SINE Alu -5 307 1 1626 166 68 113 chr20 59177507 59177737 -12976145 - MLT1D LTR MaLR -265 240 1 625 273 142 56 chr20 59177737 59177925 -12975957 - L2 LINE L2 -592 2721 2386 411 253 31 88 chr20 59178276 59178321 -12975561 - L1ME3A LINE L1 -5 6165 6119 844 133 0 37 chr20 59178321 59178456 -12975426 + FLAM_C SINE Alu 1 130 -3 411 253 31 88 chr20 59178456 59178604 -12975278 - L1ME3A LINE L1 -51 6119 5983 203 309 144 21 chr20 59179224 59179321 -12974561 - L2 LINE L2 -9 3304 3196 294 208 192 32 chr20 59179413 59179538 -12974344 - MLT1D LTR MaLR -2 503 359 468 208 59 0 chr20 59179575 59179676 -12974206 - MER45 DNA AcHobo -933 107 1 984 146 11 27 chr20 59179695 59179880 -12974002 + MER20 DNA MER1_type 38 219 0 264 322 11 0 chr20 59179978 59180065 -12973817 - L2 LINE L2 -222 3050 2963 458 41 10 186 chr20 59180198 59180255 -12973627 - MADE1 DNA Mariner 0 80 45 2110 124 0 3 chr20 59180255 59180581 -12973301 + AluSx SINE Alu 1 312 0 458 41 10 186 chr20 59180581 59180620 -12973262 - MADE1 DNA Mariner -35 45 1 1703 124 0 0 chr20 59180959 59181184 -12972698 - AluSq SINE Alu -21 292 68 1029 103 55 0 chr20 59181184 59181329 -12972553 - AluSx SINE Alu -159 153 1 321 271 82 0 chr20 59181330 59181415 -12972467 + MER5B DNA MER1_type 36 127 -51 1852 149 7 24 chr20 59181420 59181716 -12972166 - AluJo SINE Alu -9 303 13 704 203 16 36 chr20 59181775 59181967 -12971915 - MER53 DNA DNA -1 188 1 2103 122 3 14 chr20 59182572 59182866 -12971016 - AluSq SINE Alu -22 291 1 890 235 5 10 chr20 59183360 59183556 -12970326 - MER58A DNA MER1_type 0 224 30 2438 60 0 3 chr20 59183621 59183934 -12969948 + AluY SINE Alu 1 312 0 1837 178 7 0 chr20 59183934 59184221 -12969661 - AluJb SINE Alu -23 289 1 986 211 28 131 chr20 59184879 59184917 -12968965 - L1MC5 LINE L1 -208 7753 7713 2355 100 0 3 chr20 59184917 59185216 -12968666 - AluSq SINE Alu -15 298 1 986 211 28 131 chr20 59185216 59185246 -12968636 - L1MC5 LINE L1 -248 7713 7682 1752 183 10 10 chr20 59185246 59185547 -12968335 + AluJo SINE Alu 4 304 -8 986 211 28 131 chr20 59185547 59185594 -12968288 - L1MC5 LINE L1 -279 7682 7632 1790 154 32 0 chr20 59185594 59185879 -12968003 - AluJb SINE Alu -18 294 1 986 211 28 131 chr20 59185879 59186258 -12967624 - L1MC5 LINE L1 -329 7632 7308 400 171 23 23 chr20 59186260 59186348 -12967534 - FLAM_A SINE Alu -15 127 40 282 244 58 23 chr20 59186350 59186436 -12967446 + MER69 DNA AcHobo 2434 2522 -4 2168 145 0 0 chr20 59186447 59186750 -12967132 - AluSq SINE Alu -10 303 1 365 285 184 10 chr20 59187037 59187244 -12966638 + L2 LINE L2 948 1190 -2124 406 226 42 124 chr20 59187407 59187547 -12966335 - MLT1K LTR MaLR -386 202 52 2104 198 30 61 chr20 59187547 59187633 -12966249 - MER74A LTR ERVL 0 558 471 2333 91 0 7 chr20 59187633 59187930 -12965952 + AluSx SINE Alu 2 296 -16 1537 165 26 19 chr20 59187936 59188202 -12965680 + AluJo SINE Alu 45 312 0 2104 198 30 61 chr20 59188202 59188684 -12965198 - MER74A LTR ERVL -92 466 1 406 226 42 124 chr20 59188684 59188760 -12965122 - MLT1K LTR MaLR -536 52 4 443 230 15 44 chr20 59189735 59189870 -12964012 + L2 LINE L2 2352 2482 -832 593 164 9 0 chr20 59189870 59189986 -12963896 + CT-rich Low_complexity Low_complexity 1 117 0 2147 102 0 4 chr20 59189994 59190268 -12963614 - AluSx SINE Alu -39 273 1 395 275 99 6 chr20 59190268 59190432 -12963450 + L2 LINE L2 2467 2649 -665 1116 214 61 0 chr20 59190527 59190583 -12963299 + AluJo SINE Alu 62 113 -199 423 0 0 0 chr20 59190583 59190630 -12963252 + (CA)n Simple_repeat Simple_repeat 2 48 0 1116 214 61 0 chr20 59190630 59190802 -12963080 + AluJo SINE Alu 113 304 -8 325 272 185 28 chr20 59190804 59191055 -12962827 + L2 LINE L2 2739 2949 -364 703 162 7 37 chr20 59191055 59191191 -12962691 - FLAM_C SINE Alu -1 132 1 325 272 185 28 chr20 59191191 59191317 -12962565 + L2 LINE L2 2949 3175 -138 220 164 182 0 chr20 59191829 59191884 -12961998 + MIR SINE MIR 82 146 -62 275 283 119 19 chr20 59192099 59192356 -12961526 - L2 LINE L2 -266 3047 2765 714 246 47 19 chr20 59193074 59193289 -12960593 - MIR SINE MIR -21 241 21 448 239 28 0 chr20 59193901 59194010 -12959872 + MIR3 SINE MIR 94 205 -3 3416 162 26 49 chr20 59194142 59194877 -12959005 + L1MB2 LINE L1 5452 6169 -2 1271 91 34 6 chr20 59194878 59195054 -12958828 - AluSq SINE Alu -15 298 118 1158 78 21 0 chr20 59195190 59195331 -12958551 - AluSq/x SINE Alu -168 145 2 800 158 105 20 chr20 59195348 59195500 -12958382 - AluJo SINE Alu -22 290 126 257 262 16 104 chr20 59196163 59196218 -12957664 - L1MC4a LINE L1 -1896 5912 5854 2276 102 0 20 chr20 59196218 59196521 -12957361 - AluSx SINE Alu -15 297 1 257 262 16 104 chr20 59196521 59196648 -12957234 - L1MC4a LINE L1 -1954 5854 5746 329 192 0 27 chr20 59196649 59196722 -12957160 - Charlie4 DNA MER1_type -3 1958 1888 2364 105 3 0 chr20 59196726 59197032 -12956850 - AluSx SINE Alu -5 307 1 24 32 0 0 chr20 59197032 59197063 -12956819 + AT_rich Low_complexity Low_complexity 1 31 0 189 0 0 0 chr20 59197064 59197085 -12956797 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2217 68 0 11 chr20 59197085 59197349 -12956533 - AluSc SINE Alu -45 264 4 1694 156 46 11 chr20 59197353 59197636 -12956246 - AluJo SINE Alu -18 294 2 264 200 0 43 chr20 59197642 59197712 -12956170 - Charlie4 DNA MER1_type -76 1885 1819 613 260 172 22 chr20 59197766 59198085 -12955797 - L1MC4a LINE L1 -2073 5735 5369 239 307 89 44 chr20 59198297 59198522 -12955360 - L2 LINE L2 -110 3203 2969 2244 103 40 0 chr20 59198576 59198876 -12955006 - AluSx SINE Alu 0 312 1 189 0 0 0 chr20 59199335 59199356 -12954526 + (T)n Simple_repeat Simple_repeat 1 21 0 2472 88 3 0 chr20 59199686 59199993 -12953889 - AluSp SINE Alu -5 308 1 318 183 0 42 chr20 59199993 59200064 -12953818 - MIR SINE MIR -97 165 98 316 284 23 0 chr20 59200338 59200426 -12953456 + MER5B DNA MER1_type 89 178 0 1337 149 79 4 chr20 59200874 59201102 -12952780 - AluJb SINE Alu -4 308 64 3033 174 9 38 chr20 59201103 59201279 -12952603 - MER41D LTR ERV1 0 557 377 1222 33 11 33 chr20 59201279 59201462 -12952420 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 3033 174 9 38 chr20 59201462 59201479 -12952403 - MER41D LTR ERV1 -180 377 361 2397 90 3 0 chr20 59201479 59201779 -12952103 - AluY SINE Alu -10 301 1 596 171 81 8 chr20 59201781 59201904 -12951978 - FLAM_A SINE Alu -1 132 1 3033 174 9 38 chr20 59201904 59202280 -12951602 - MER41D LTR ERV1 -197 360 1 458 123 0 0 chr20 59202280 59202345 -12951537 - AluJb SINE Alu -246 66 2 324 186 302 0 chr20 59202447 59202533 -12951349 + MER81 DNA DNA 3 114 0 219 223 277 21 chr20 59202603 59202697 -12951185 - MER5A DNA MER1_type -6 183 66 2385 82 0 29 chr20 59202697 59203013 -12950869 - AluY SINE Alu -4 307 1 923 120 23 0 chr20 59203044 59203177 -12950705 - AluJb SINE Alu -176 136 1 294 211 21 0 chr20 59203177 59203247 -12950635 - MER5A DNA MER1_type -115 74 4 256 203 145 0 chr20 59203934 59204003 -12949879 + MIR SINE MIR 84 162 -100 383 186 249 93 chr20 59204006 59204243 -12949639 + LTR33 LTR ERVL 4 277 -244 594 219 27 27 chr20 59204272 59204418 -12949464 + LTR41 LTR ERVL 1 146 -627 771 255 67 80 chr20 59204466 59204842 -12949040 + MLT1K LTR MaLR 156 526 -62 593 254 105 5 chr20 59204953 59205162 -12948720 - MIR SINE MIR 0 262 33 686 297 29 13 chr20 59205542 59205781 -12948101 - MIR SINE MIR 0 262 20 483 269 18 36 chr20 59206153 59206320 -12947562 - MLT1K LTR MaLR -27 561 398 1170 238 78 50 chr20 59206380 59206779 -12947103 - MLT1J LTR MaLR -101 410 1 1997 134 10 3 chr20 59206986 59207284 -12946598 - AluJb SINE Alu -4 308 9 311 254 0 103 chr20 59207406 59207532 -12946350 - MER81 DNA DNA 0 114 2 399 221 49 41 chr20 59207558 59207680 -12946202 - MLT1L LTR MaLR -89 526 404 798 216 52 41 chr20 59207804 59208078 -12945804 - LTR16A1 LTR ERVL -35 415 147 388 254 29 51 chr20 59208240 59208378 -12945504 - MLT1L LTR MaLR -333 282 148 979 257 100 48 chr20 59209571 59209667 -12944215 - L2 LINE L2 0 3313 3223 2253 99 3 16 chr20 59209667 59209979 -12943903 - AluSg SINE Alu -2 308 1 979 257 100 48 chr20 59209979 59210052 -12943830 - L2 LINE L2 -90 3223 3155 2691 181 33 11 chr20 59210052 59210598 -12943284 - MER74A LTR ERVL 0 558 1 979 257 100 48 chr20 59210598 59211159 -12942723 - L2 LINE L2 -158 3155 2467 293 309 172 25 chr20 59211526 59211811 -12942071 + L2 LINE L2 2920 3246 -67 655 215 70 0 chr20 59212006 59212164 -12941718 + MER96B DNA MER1_type? 249 417 0 602 143 30 0 chr20 59213226 59213359 -12940523 + GA-rich Low_complexity Low_complexity 1 137 0 743 211 7 0 chr20 59213451 59213603 -12940279 - FAM SINE Alu -10 175 23 424 283 249 8 chr20 59213617 59213978 -12939904 - L2 LINE L2 -3 3310 2863 750 261 200 16 chr20 59216159 59216653 -12937229 + L2 LINE L2 2174 2758 -556 232 229 198 10 chr20 59217312 59217408 -12936474 + L2 LINE L2 3145 3258 -14 2304 73 4 0 chr20 59217778 59218051 -12935831 - AluSp SINE Alu -39 274 1 637 229 73 24 chr20 59218051 59218256 -12935626 - MIR SINE MIR -36 226 12 717 175 0 8 chr20 59218288 59218408 -12935474 + FLAM_A SINE Alu 1 119 -14 2228 131 0 0 chr20 59218408 59218705 -12935177 - AluSx SINE Alu -15 297 1 22 56 0 0 chr20 59218705 59218741 -12935141 + AT_rich Low_complexity Low_complexity 1 36 0 477 153 0 0 chr20 59218894 59218966 -12934916 + AluSg/x SINE Alu 183 254 -58 630 170 0 0 chr20 59218971 59219083 -12934799 + FLAM_C SINE Alu 24 135 -8 295 194 42 28 chr20 59219198 59219270 -12934612 + MIR SINE MIR 184 256 -6 1956 155 3 10 chr20 59219556 59219852 -12934030 - AluJb SINE Alu -18 294 1 360 273 39 39 chr20 59219853 59220007 -12933875 - Charlie8 DNA MER1_type -2249 168 15 519 249 106 94 chr20 59220481 59220726 -12933156 - L2 LINE L2 0 3272 3025 895 203 83 83 chr20 59221666 59221832 -12932050 + MLT1A2 LTR MaLR 1 166 -208 2412 80 0 0 chr20 59221832 59222156 -12931726 + AluSx SINE Alu 1 324 0 895 203 83 83 chr20 59222156 59222360 -12931522 + MLT1A2 LTR MaLR 165 374 0 247 284 0 14 chr20 59222430 59222504 -12931378 - L2 LINE L2 -54 3259 3187 23 33 0 0 chr20 59222539 59222569 -12931313 + AT_rich Low_complexity Low_complexity 1 30 0 948 213 50 5 chr20 59222612 59222814 -12931068 + MER20 DNA MER1_type 6 216 -3 602 272 25 7 chr20 59222818 59223017 -12930865 + MIR SINE MIR 12 258 0 2148 119 14 0 chr20 59223017 59223312 -12930570 - AluSx SINE Alu -13 299 1 289 278 0 35 chr20 59223319 59223434 -12930448 + MER113 DNA MER1_type? 126 236 -285 380 317 48 60 chr20 59223468 59223717 -12930165 + L2 LINE L2 3009 3254 -18 696 191 115 102 chr20 59223914 59224149 -12929733 + MER102b DNA MER1_type 103 340 -1 2221 101 0 0 chr20 59224241 59224551 -12929331 + AluSc SINE Alu 1 310 0 615 332 130 2 chr20 59225782 59226228 -12927654 - L2 LINE L2 0 3313 2811 304 306 91 28 chr20 59226312 59226564 -12927318 - L2 LINE L2 -656 2658 2391 1849 179 45 67 chr20 59226855 59227363 -12926519 + MLT1D LTR MaLR 1 497 -8 2185 123 0 0 chr20 59227374 59227667 -12926215 + AluSx SINE Alu 1 293 -19 587 311 77 10 chr20 59227760 59227969 -12925913 + MIR SINE MIR 24 246 -16 242 306 5 0 chr20 59228096 59228217 -12925665 + L1ME LINE L1 5531 5655 -515 331 115 19 0 chr20 59228254 59228306 -12925576 + LTR16C LTR ERVL 427 479 -12 253 275 75 33 chr20 59228820 59228940 -12924942 - MER5A DNA MER1_type -26 163 39 267 250 69 0 chr20 59229487 59229559 -12924323 + MIR SINE MIR 108 184 -78 492 261 115 32 chr20 59229848 59230066 -12923816 - MIR SINE MIR -25 237 2 564 160 113 53 chr20 59230361 59230449 -12923433 + MLT1D LTR MaLR 347 450 -55 1694 180 14 7 chr20 59230449 59230756 -12923126 + AluJo SINE Alu 1 309 0 564 160 113 53 chr20 59230756 59230816 -12923066 + MLT1D LTR MaLR 450 505 0 243 295 32 74 chr20 59232907 59233002 -12920880 + L2 LINE L2 3180 3270 -2 199 254 0 113 chr20 59233383 59233454 -12920428 + L2 LINE L2 3251 3313 0 296 105 0 123 chr20 59233578 59233635 -12920247 + L2 LINE L2 3262 3311 -2 205 282 0 14 chr20 59234352 59234423 -12919459 + G-rich Low_complexity Low_complexity 1 70 0 244 214 0 56 chr20 59235510 59235599 -12918283 + CT-rich Low_complexity Low_complexity 2 85 0 491 218 0 0 chr20 59235783 59235884 -12917998 + FRAM SINE Alu 66 166 -10 440 307 50 34 chr20 59236005 59236243 -12917639 - L2 LINE L2 -219 3094 2853 2305 118 0 3 chr20 59236336 59236642 -12917240 - AluSx SINE Alu -7 305 1 1535 143 92 29 chr20 59236660 59236933 -12916949 - AluJo SINE Alu -22 290 1 304 230 103 40 chr20 59236962 59237088 -12916794 + L2 LINE L2 3137 3270 -2 795 204 74 0 chr20 59237182 59237358 -12916524 - MER5A DNA MER1_type 0 189 1 508 209 124 62 chr20 59237946 59238156 -12915726 + Charlie8 DNA MER1_type 12 234 -2183 238 295 64 13 chr20 59238243 59238321 -12915561 - MIR SINE MIR -164 98 17 180 197 167 61 chr20 59238711 59238843 -12915039 + L2 LINE L2 2888 3033 -280 538 178 75 81 chr20 59238918 59239043 -12914839 - MER96B DNA MER1_type? -244 173 48 2385 102 0 3 chr20 59239043 59239357 -12914525 - AluSq SINE Alu 0 313 1 538 178 75 81 chr20 59239357 59239405 -12914477 - MER96B DNA MER1_type? -369 48 1 452 240 31 31 chr20 59239429 59239558 -12914324 + MIR SINE MIR 23 151 -57 396 263 114 0 chr20 59239884 59239998 -12913884 - L2 LINE L2 -6 3266 3140 1017 216 22 43 chr20 59240615 59240893 -12912989 + MER102b DNA MER1_type 70 341 0 530 270 85 52 chr20 59241186 59241397 -12912485 - MIR SINE MIR -1 261 44 202 250 83 12 chr20 59242333 59242417 -12911465 - MIR SINE MIR -89 119 30 306 287 52 26 chr20 59242468 59242583 -12911299 + L2 LINE L2 2925 3042 -271 1877 147 0 42 chr20 59243920 59244226 -12909656 + AluJo SINE Alu 12 304 -8 928 223 10 10 chr20 59244415 59244612 -12909270 + LTR40b LTR ERVL 1 197 -265 1908 137 24 0 chr20 59244612 59244948 -12908934 + L1MB2 LINE L1 5800 6143 -28 369 0 0 0 chr20 59244948 59244989 -12908893 + (TG)n Simple_repeat Simple_repeat 2 42 0 883 199 161 13 chr20 59245011 59245247 -12908635 + LTR40b LTR ERVL 184 454 -8 2338 103 0 3 chr20 59245356 59245657 -12908225 - AluSx SINE Alu -12 300 1 323 203 162 0 chr20 59245666 59245740 -12908142 + L2 LINE L2 3226 3311 -2 199 219 0 0 chr20 59246032 59246073 -12907809 - MIR SINE MIR -64 144 104 679 98 0 0 chr20 59246410 59246502 -12907380 - AluSg/x SINE Alu -11 301 210 200 292 21 0 chr20 59246983 59247031 -12906851 - L2 LINE L2 -11 3302 3254 453 289 38 62 chr20 59247193 59247404 -12906478 - L2 LINE L2 0 3313 3108 672 302 14 39 chr20 59247691 59247976 -12905906 + L2 LINE L2 2888 3165 -148 276 206 199 23 chr20 59248108 59248239 -12905643 - LTR33 LTR ERVL -335 186 33 427 276 24 47 chr20 59248358 59248528 -12905354 + MIR SINE MIR 46 211 -51 279 365 50 19 chr20 59249437 59249596 -12904286 + MIR3 SINE MIR 42 205 -3 959 206 41 41 chr20 59249596 59249768 -12904114 - MER20 DNA MER1_type 0 219 45 2026 145 10 7 chr20 59249768 59250078 -12903804 + AluJo SINE Alu 1 311 -1 959 206 41 41 chr20 59250078 59250124 -12903758 - MER20 DNA MER1_type -173 46 1 395 236 146 9 chr20 59250220 59250330 -12903552 - L2 LINE L2 -2 3270 3146 2484 74 0 16 chr20 59250475 59250787 -12903095 + AluY SINE Alu 1 307 -4 912 129 0 43 chr20 59250796 59250935 -12902947 + FLAM_C SINE Alu 1 133 0 949 241 81 64 chr20 59251130 59251201 -12902681 - MLT1C LTR MaLR 0 467 399 2168 127 0 3 chr20 59251201 59251501 -12902381 + AluSg SINE Alu 1 299 -11 949 241 81 64 chr20 59251501 59251835 -12902047 - MLT1C LTR MaLR -68 399 55 3080 291 148 16 chr20 59252041 59253546 -12900336 + L2 LINE L2 1047 2750 -564 1550 152 20 8 chr20 59253623 59253873 -12900009 + AluJo SINE Alu 58 310 -2 342 283 30 10 chr20 59253875 59254002 -12899880 - MIR SINE MIR -78 130 1 1108 164 6 0 chr20 59254095 59254272 -12899610 - MER45A DNA AcHobo 0 178 1 2271 101 7 10 chr20 59254611 59254908 -12898974 + AluSq SINE Alu 1 296 -17 3625 130 37 22 chr20 59254985 59255291 -12898591 + MER7C DNA MER2_type 2 302 -2726 2116 115 3 17 chr20 59255291 59255586 -12898296 - AluSg SINE Alu -19 291 1 3625 130 37 22 chr20 59255586 59255871 -12898011 + MER7C DNA MER2_type 302 602 0 1914 169 30 0 chr20 59255961 59256262 -12897620 - AluJo SINE Alu -2 310 1 2318 126 40 0 chr20 59256778 59257127 -12896755 - THE1B LTR MaLR -1 363 1 1236 141 73 10 chr20 59257358 59257564 -12896318 + MER20 DNA MER1_type 1 219 0 303 267 81 121 chr20 59257698 59258005 -12895877 + MLT1L LTR MaLR 97 391 -224 202 311 14 14 chr20 59258174 59258248 -12895634 + MIR SINE MIR 174 247 -15 2472 147 89 2 chr20 59258589 59259005 -12894877 - LTR47A LTR ERVL 0 452 1 2159 116 0 0 chr20 59259021 59259335 -12894547 - AluSq SINE Alu 0 314 1 626 202 48 16 chr20 59259335 59259523 -12894359 + MER113 DNA MER1_type? 64 257 -264 1821 127 8 0 chr20 59259990 59260242 -12893640 - AluSx SINE Alu -58 254 1 4721 156 44 6 chr20 59260680 59261624 -12892258 + L1MB3 LINE L1 5200 6183 0 257 322 151 7 chr20 59262328 59262474 -12891408 + L2 LINE L2 2894 3060 -212 378 238 42 71 chr20 59262682 59262850 -12891032 - Charlie8 DNA MER1_type -2153 264 102 539 242 38 0 chr20 59263606 59263738 -12890144 - MIR SINE MIR 0 262 126 433 182 0 0 chr20 59263738 59263804 -12890078 - AluJ/FLAM SINE Alu -246 66 1 3258 154 32 12 chr20 59263866 59263901 -12889981 - L1MB3 LINE L1 -11 6172 6139 2036 132 20 0 chr20 59263901 59264197 -12889685 - AluSx SINE Alu -10 302 1 3258 154 32 12 chr20 59264197 59264752 -12889130 - L1MB3 LINE L1 -44 6139 5570 670 274 65 9 chr20 59265401 59265631 -12888251 - MIR SINE MIR 0 262 20 294 279 0 0 chr20 59266177 59266256 -12887626 + (TG)n Simple_repeat Simple_repeat 2 80 0 941 230 153 38 chr20 59266299 59266766 -12887116 - MLT1E LTR MaLR 0 593 2 2281 75 3 33 chr20 59266820 59267125 -12886757 - AluY SINE Alu -15 296 1 204 200 50 0 chr20 59267254 59267314 -12886568 + (TG)n Simple_repeat Simple_repeat 1 63 0 1395 130 12 16 chr20 59267347 59267600 -12886282 + L1MA2 LINE L1 6053 6304 0 275 208 10 62 chr20 59267615 59267711 -12886171 + MER106B DNA MER1_type 969 1059 0 253 342 144 0 chr20 59267731 59267842 -12886040 - MIR SINE MIR -12 250 124 1597 213 65 92 chr20 59267868 59268463 -12885419 + MLT1E LTR MaLR 15 593 0 289 253 195 0 chr20 59268471 59268558 -12885324 - MIR SINE MIR -86 122 19 2085 152 0 0 chr20 59268616 59268912 -12884970 + AluSx SINE Alu 1 296 -16 632 249 59 66 chr20 59269782 59269962 -12883920 + MIR SINE MIR 10 180 -82 2089 141 0 3 chr20 59269962 59270259 -12883623 - AluJb SINE Alu -16 296 1 632 249 59 66 chr20 59270259 59270334 -12883548 + MIR SINE MIR 180 254 -8 205 175 0 0 chr20 59270661 59270701 -12883181 + (TG)n Simple_repeat Simple_repeat 1 40 0 586 290 17 6 chr20 59270876 59271052 -12882830 + MIR SINE MIR 71 248 -14 489 202 61 0 chr20 59271140 59271254 -12882628 - LTR16A1 LTR ERVL -60 397 277 299 269 31 62 chr20 59271368 59271498 -12882384 - LTR16A1 LTR ERVL -331 126 1 776 162 7 0 chr20 59272290 59272438 -12881444 + (TCCA)n Simple_repeat Simple_repeat 4 152 0 2617 228 115 112 chr20 59273101 59273248 -12880634 - L1MC4 LINE L1 -1 8041 7896 2084 126 65 14 chr20 59273248 59273604 -12880278 + THE1C LTR MaLR 2 375 0 2617 228 115 112 chr20 59273604 59273955 -12879927 - L1MC4 LINE L1 -146 7896 7548 1980 152 7 3 chr20 59273955 59274245 -12879637 - AluJb SINE Alu -20 292 2 2617 228 115 112 chr20 59274245 59275078 -12878804 - L1MC4 LINE L1 -494 7548 6614 2636 51 0 13 chr20 59275078 59275390 -12878492 - AluY SINE Alu -3 308 1 2617 228 115 112 chr20 59275390 59276010 -12877872 - L1MC4 LINE L1 -1428 6614 5997 1547 218 58 58 chr20 59276008 59276321 -12877561 - L1MC4 LINE L1 -2018 5790 5478 * 2251 125 3 6 chr20 59276321 59276633 -12877249 - AluSx SINE Alu -1 311 1 1547 218 58 58 chr20 59276633 59276691 -12877191 - L1MC4 LINE L1 -2330 5478 5421 3788 101 13 13 chr20 59276691 59277245 -12876637 - L1PA14 LINE L1 0 6161 5608 1547 218 58 58 chr20 59277245 59277363 -12876519 - L1MC4 LINE L1 -2387 5421 5297 2386 99 0 10 chr20 59277363 59277667 -12876215 - AluSx SINE Alu -11 301 1 1547 218 58 58 chr20 59277667 59277712 -12876170 - L1MC4 LINE L1 -2510 5298 5254 202 376 14 28 chr20 59277905 59278046 -12875836 + L2 LINE L2 2447 2585 -729 1152 154 0 0 chr20 59278162 59278350 -12875532 - AluJb SINE Alu -8 304 117 1927 122 31 0 chr20 59278380 59278667 -12875215 + AluJb SINE Alu 1 296 -16 1658 253 59 42 chr20 59278678 59279444 -12874438 - L1ME LINE L1 -5070 1000 26 1085 206 4 17 chr20 59279761 59279994 -12873888 - AluJo SINE Alu -82 230 1 22 56 0 0 chr20 59280940 59280976 -12872906 + AT_rich Low_complexity Low_complexity 1 36 0 1921 142 0 3 chr20 59280987 59281282 -12872600 - AluSx SINE Alu -13 299 6 1851 120 0 0 chr20 59281546 59281812 -12872070 + AluSg1 SINE Alu 35 300 -9 273 317 50 0 chr20 59282060 59282161 -12871721 + MIR SINE MIR 101 206 -56 482 279 25 67 chr20 59283641 59283881 -12870001 - L2 LINE L2 -2 3311 3082 643 263 189 5 chr20 59284384 59284601 -12869281 + MIR SINE MIR 6 262 0 488 266 62 26 chr20 59284685 59284864 -12869018 - L2 LINE L2 -2 3311 3123 2035 128 7 0 chr20 59284864 59285168 -12868714 - AluSx SINE Alu -6 306 1 488 266 62 26 chr20 59285168 59285180 -12868702 - L2 LINE L2 -190 3123 3113 852 296 71 28 chr20 59285204 59285747 -12868135 - MLT1L LTR MaLR -15 600 5 574 283 86 85 chr20 59286099 59287041 -12866841 + L2 LINE L2 2308 3250 -22 330 342 34 43 chr20 59287126 59287500 -12866382 - L2 LINE L2 -213 3059 2686 2106 132 0 0 chr20 59287500 59287804 -12866078 + AluSx SINE Alu 1 304 -8 330 342 34 43 chr20 59287804 59287834 -12866048 - L2 LINE L2 -586 2686 2657 443 239 73 0 chr20 59288410 59288519 -12865363 - MIR SINE MIR -70 192 76 528 271 106 14 chr20 59288628 59288835 -12865047 - MIR SINE MIR -1 261 36 322 239 64 37 chr20 59289533 59289642 -12864240 - MIR SINE MIR -114 148 37 315 211 46 4 chr20 59289857 59289943 -12863939 + MIR SINE MIR 61 147 -61 658 145 114 8 chr20 59290267 59290398 -12863484 - L1ME3A LINE L1 -5 6165 6021 1641 120 124 4 chr20 59290420 59290697 -12863185 + AluSc SINE Alu 1 299 0 797 238 55 30 chr20 59290775 59290913 -12862969 - MIR SINE MIR -44 218 72 2764 76 22 3 chr20 59290913 59291281 -12862601 + THE1C LTR MaLR 1 375 0 797 238 55 30 chr20 59291281 59291344 -12862538 - MIR SINE MIR -190 72 12 1940 145 7 0 chr20 59292316 59292619 -12861263 + AluSx SINE Alu 1 305 -7 343 214 12 12 chr20 59292664 59292748 -12861134 + MIR SINE MIR 92 175 -87 482 176 85 106 chr20 59292789 59292873 -12861009 - ORSL DNA AcHobo -8 267 183 1840 145 7 3 chr20 59292873 59293169 -12860713 + AluSx SINE Alu 1 297 -15 482 176 85 106 chr20 59293169 59293283 -12860599 - ORSL DNA AcHobo -92 183 73 476 172 38 38 chr20 59293264 59293421 -12860461 - ORSL DNA AcHobo -118 157 1 * 643 260 137 43 chr20 59293464 59293814 -12860068 - MLT1J LTR MaLR -94 417 35 433 318 99 40 chr20 59294070 59294372 -12859510 + L2 LINE L2 2991 3310 -3 1304 259 108 7 chr20 59294491 59295147 -12858735 - L2 LINE L2 -25 3288 2553 226 208 78 52 chr20 59295558 59295635 -12858247 - MIR3 SINE MIR -48 160 82 198 0 0 0 chr20 59296482 59296504 -12857378 + (T)n Simple_repeat Simple_repeat 1 22 0 1485 243 120 23 chr20 59296806 59297247 -12856635 - MLT1K LTR MaLR -18 570 87 2111 82 16 10 chr20 59297828 59298132 -12855750 - AluSc SINE Alu -3 306 1 198 250 260 10 chr20 59298870 59298966 -12854916 + MER5A DNA MER1_type 41 160 -29 * 396 257 0 46 chr20 59298894 59299003 -12854879 - MER5A DNA MER1_type -77 112 9 315 203 0 14 chr20 59299588 59299657 -12854225 - MLT1H LTR MaLR 0 549 482 1026 203 5 0 chr20 59299667 59299864 -12854018 - L1PA16 LINE L1 -16 6150 5953 536 242 188 76 chr20 59300039 59300395 -12853487 - MLT1H LTR MaLR -113 436 41 234 91 0 0 chr20 59300479 59300512 -12853370 + (TTCA)n Simple_repeat Simple_repeat 4 36 0 54 56 0 32 chr20 59300918 59300941 -12852941 + AT_rich Low_complexity Low_complexity 1 23 -99 1166 95 21 21 chr20 59300941 59301131 -12852751 - L1MA2 LINE L1 -4 6300 6111 54 56 0 32 chr20 59301131 59301233 -12852649 + AT_rich Low_complexity Low_complexity 23 122 0 1362 91 110 0 chr20 59301233 59301442 -12852440 - L1MA2 LINE L1 -159 6145 5914 284 173 49 99 chr20 59301626 59301707 -12852175 + MER63 DNA MER1_type 676 752 -84 375 264 9 55 chr20 59301756 59301866 -12852016 - MIR SINE MIR -80 182 78 226 132 0 53 chr20 59301888 59301926 -12851956 - MER4B LTR ERV1 -469 141 106 245 260 0 0 chr20 59301944 59301994 -12851888 + MER63 DNA MER1_type 1002 1051 -10 523 267 148 10 chr20 59302008 59302210 -12851672 + MIR SINE MIR 31 260 -2 505 261 28 21 chr20 59302454 59302596 -12851286 - MIR SINE MIR -79 183 41 800 162 26 7 chr20 59302675 59302829 -12851053 - L1MB7 LINE L1 0 6184 6028 699 224 50 50 chr20 59304239 59304458 -12849424 - MER20 DNA MER1_type 0 219 1 4309 113 11 2 chr20 59304501 59305122 -12848760 + MER41B LTR ERV1 1 627 -8 1945 115 6 43 chr20 59305140 59305462 -12848420 + AluSg SINE Alu 1 310 0 441 261 95 52 chr20 59305513 59305724 -12848158 + MIR SINE MIR 3 222 -40 785 263 26 49 chr20 59307576 59307842 -12846040 + MIR SINE MIR 3 262 0 417 243 45 27 chr20 59308001 59308112 -12845770 - MIR SINE MIR -39 223 111 242 227 45 15 chr20 59308668 59308734 -12845148 - MIR SINE MIR -188 74 7 539 211 189 22 chr20 59308748 59308928 -12844954 + MIR SINE MIR 12 221 -41 1661 176 3 10 chr20 59309052 59309348 -12844534 - AluJb SINE Alu -18 294 1 819 209 43 26 chr20 59310478 59310687 -12843195 + MIR SINE MIR 11 223 -39 230 270 63 87 chr20 59310719 59310845 -12843037 - MIR SINE MIR -108 154 32 2108 85 3 34 chr20 59312225 59312520 -12841362 + AluSg SINE Alu 1 286 -24 215 147 441 15 chr20 59312524 59312592 -12841290 + MER5A DNA MER1_type 9 105 -84 245 196 59 0 chr20 59312722 59312773 -12841109 + MLT1J LTR MaLR 458 511 0 312 288 114 8 chr20 59312807 59312939 -12840943 - MIR SINE MIR -89 173 28 329 252 19 116 chr20 59313268 59313448 -12840434 - MER5A DNA MER1_type -9 180 8 2027 130 0 3 chr20 59313504 59313796 -12840086 - AluSx SINE Alu -21 291 1 2705 195 84 5 chr20 59314109 59314689 -12839193 + MLT1E2 LTR MaLR 1 626 0 646 273 125 30 chr20 59314906 59315305 -12838577 - L1ME4a LINE L1 -120 6001 5565 401 178 14 0 chr20 59316307 59316380 -12837502 - MER103 DNA DNA -80 86 13 192 260 60 0 chr20 59316479 59316529 -12837353 - MIR SINE MIR -68 140 88 758 118 7 30 chr20 59316982 59317117 -12836765 + L1PA6 LINE L1 6019 6150 -4 24 0 0 0 chr20 59317196 59317220 -12836662 + AT_rich Low_complexity Low_complexity 1 24 0 1854 153 91 26 chr20 59317323 59317531 -12836351 + MLT1A1 LTR MaLR 1 241 -124 2228 116 36 33 chr20 59317531 59317893 -12835989 - THE1B LTR MaLR -1 363 1 1854 153 91 26 chr20 59317893 59318023 -12835859 + MLT1A1 LTR MaLR 241 361 -4 877 204 23 41 chr20 59318289 59318509 -12835373 + MER20 DNA MER1_type 1 216 -3 237 298 48 19 chr20 59319248 59319352 -12834530 - MIR SINE MIR -108 154 48 306 50 0 0 chr20 59319490 59319530 -12834352 + (TG)n Simple_repeat Simple_repeat 1 40 0 713 242 15 14 chr20 59319542 59319754 -12834128 + MIR SINE MIR 13 225 -37 1630 279 13 21 chr20 59320319 59320793 -12833089 + MLT1K LTR MaLR 11 480 -108 21 0 0 0 chr20 59321155 59321176 -12832706 + AT_rich Low_complexity Low_complexity 1 21 0 357 291 112 81 chr20 59321337 59321622 -12832260 + L2 LINE L2 3016 3309 -4 707 129 57 0 chr20 59321678 59321802 -12832080 + L1MA2 LINE L1 6174 6304 0 183 294 71 35 chr20 59322026 59322111 -12831771 - MIR SINE MIR -68 194 107 1896 101 21 21 chr20 59322856 59323144 -12830738 - AluSx SINE Alu -24 288 1 421 331 22 11 chr20 59323334 59323518 -12830364 + MIR SINE MIR 64 249 -13 340 271 56 0 chr20 59323548 59323655 -12830227 - MIR SINE MIR -62 146 34 298 282 247 22 chr20 59323812 59324128 -12829754 - L2 LINE L2 -5 3308 2922 553 257 114 45 chr20 59324180 59324382 -12829500 - MLT1D LTR MaLR 0 505 290 411 160 0 0 chr20 59324422 59324497 -12829385 + CT-rich Low_complexity Low_complexity 4 78 0 1757 151 30 7 chr20 59324502 59324801 -12829081 - AluJo SINE Alu -6 306 1 1678 150 11 11 chr20 59324803 59325089 -12828793 - AluSq SINE Alu -13 300 15 684 244 128 0 chr20 59325726 59325906 -12827976 + MIR SINE MIR 7 209 -53 2331 49 3 29 chr20 59326010 59326318 -12827564 - AluSq SINE Alu -13 300 1 239 213 0 88 chr20 59326321 59326401 -12827481 - MER5A DNA MER1_type -116 73 1 1990 121 7 19 chr20 59326531 59326665 -12827217 + AluJb SINE Alu 1 135 -177 2103 106 0 3 chr20 59326665 59326981 -12826901 + AluSx SINE Alu 1 315 0 1990 121 7 19 chr20 59326981 59327152 -12826730 + AluJb SINE Alu 135 303 -9 268 355 22 14 chr20 59327243 59327381 -12826501 + MIR3 SINE MIR 2 140 -68 2529 205 33 16 chr20 59327551 59328098 -12825784 - MER68 LTR ERV1 -6 556 1 681 274 13 58 chr20 59328112 59328338 -12825544 + LTR67 LTR ERVL 3 218 -339 1260 164 4 4 chr20 59328342 59328567 -12825315 + AluJb SINE Alu 87 311 -1 313 301 83 51 chr20 59328583 59328859 -12825023 + LTR67 LTR ERVL 244 528 -29 676 209 116 43 chr20 59328900 59329177 -12824705 - MER113 DNA MER1_type? -44 477 181 517 268 118 41 chr20 59329747 59330087 -12823795 + L2 LINE L2 2855 3220 -93 597 231 35 12 chr20 59330088 59330257 -12823625 - MER45A DNA AcHobo -3 175 3 355 264 46 0 chr20 59330257 59330344 -12823538 + L2 LINE L2 3210 3300 -13 186 71 0 0 chr20 59330344 59330372 -12823510 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 908 208 85 30 chr20 59331284 59331520 -12822362 - MIR SINE MIR 0 262 14 532 251 63 35 chr20 59331697 59331877 -12822005 - MIR SINE MIR -62 146 8 418 263 17 25 chr20 59331966 59332084 -12821798 - MIR SINE MIR -138 124 8 277 256 171 39 chr20 59332194 59332323 -12821559 + MIR SINE MIR 21 125 -83 427 254 108 33 chr20 59333509 59333722 -12820160 + L2 LINE L2 2545 2773 -541 440 245 133 7 chr20 59333762 59333905 -12819977 + L2 LINE L2 3152 3312 -1 670 305 99 4 chr20 59334104 59334337 -12819545 + MIR SINE MIR 1 255 -7 269 245 61 41 chr20 59334371 59334469 -12819413 - MIR SINE MIR -34 228 129 658 200 36 48 chr20 59334530 59334695 -12819187 + MER5B DNA MER1_type 1 163 -15 1688 138 15 0 chr20 59335108 59335402 -12818480 + AluSp SINE Alu 11 308 0 467 191 199 7 chr20 59335528 59335664 -12818218 + MER53 DNA DNA 28 189 0 437 293 112 52 chr20 59335697 59335929 -12817953 + MIR SINE MIR 17 262 0 248 217 154 83 chr20 59335999 59336146 -12817736 - L1ME4a LINE L1 -1 6120 5948 2180 104 3 0 chr20 59336146 59336444 -12817438 + AluSp SINE Alu 1 299 -14 248 217 154 83 chr20 59336444 59336536 -12817346 - L1ME4a LINE L1 -173 5948 5864 416 149 0 0 chr20 59336538 59336605 -12817277 + Tigger2 DNA MER2_type 1 67 -2651 * 2388 170 41 11 chr20 59336593 59337029 -12816853 + Tigger2 DNA MER2_type 2270 2718 0 252 194 155 29 chr20 59337070 59337173 -12816709 - L1ME4a LINE L1 -317 5804 5689 254 135 0 0 chr20 59337979 59338016 -12815866 - MER8 DNA MER2_type -29 210 174 * 1215 142 90 9 chr20 59338003 59338236 -12815646 + Tigger2 DNA MER2_type 2267 2518 -200 716 293 10 0 chr20 59338602 59338807 -12815075 + MIR SINE MIR 35 241 -21 326 293 152 49 chr20 59338860 59339024 -12814858 - MER5A DNA MER1_type 0 189 9 486 250 23 23 chr20 59339036 59339168 -12814714 + MER5A DNA MER1_type 49 180 -9 339 234 0 0 chr20 59339440 59339504 -12814378 - MER89 LTR ERV1 -298 261 198 327 188 16 0 chr20 59339478 59339542 -12814340 - MER89 LTR ERV1 -470 89 25 * 448 238 58 0 chr20 59340030 59340160 -12813722 - MIR SINE MIR -62 146 45 696 295 153 7 chr20 59341043 59341456 -12812426 + L1ME4a LINE L1 5461 5933 -188 570 319 76 17 chr20 59341652 59341890 -12811992 + MIR SINE MIR 7 258 -4 232 71 0 0 chr20 59342932 59342960 -12810922 + LTR6A LTR ERV1 73 100 -464 230 345 163 20 chr20 59343038 59343241 -12810641 + L3 LINE CR1 1277 1508 -69 187 331 90 15 chr20 59343304 59343437 -12810445 + MIR3 SINE MIR 2 144 -64 183 179 0 125 chr20 59343565 59343621 -12810261 - L2 LINE L2 0 3313 3265 1997 112 3 14 chr20 59344324 59344620 -12809262 + AluSx SINE Alu 1 293 -19 33 43 0 0 chr20 59344636 59344683 -12809199 + AT_rich Low_complexity Low_complexity 1 47 0 217 241 0 62 chr20 59344788 59344885 -12808997 + (TTATA)n Simple_repeat Simple_repeat 1 102 -337 1962 135 10 3 chr20 59344885 59345181 -12808701 + AluSx SINE Alu 1 298 -14 217 241 0 62 chr20 59345181 59345257 -12808625 + (TTATA)n Simple_repeat Simple_repeat 102 439 0 181 256 8 101 chr20 59345381 59345495 -12808387 - L2 LINE L2 -797 2517 2415 4753 170 29 15 chr20 59345495 59346402 -12807480 - MER49 LTR ERV1 0 923 5 181 256 8 101 chr20 59346402 59346416 -12807466 - L2 LINE L2 -899 2415 2401 41 0 0 0 chr20 59346619 59346660 -12807222 + AT_rich Low_complexity Low_complexity 1 41 0 1826 138 3 14 chr20 59346660 59346951 -12806931 - AluSq SINE Alu -23 290 3 594 246 71 14 chr20 59347036 59347247 -12806635 + MER113 DNA MER1_type? 2 224 -297 576 297 101 24 chr20 59347248 59347485 -12806397 - MIR SINE MIR -6 256 4 1056 224 28 89 chr20 59347496 59347854 -12806028 + MER58B DNA MER1_type 6 341 0 532 205 53 46 chr20 59347917 59348068 -12805814 + MER113 DNA MER1_type? 330 481 -40 1540 183 0 24 chr20 59348071 59348360 -12805522 + AluJo SINE Alu 1 282 -30 2267 76 0 0 chr20 59348367 59348658 -12805224 - AluSc SINE Alu -18 291 1 219 36 0 0 chr20 59348667 59348695 -12805187 + (A)n Simple_repeat Simple_repeat 1 28 0 181 116 23 23 chr20 59349389 59349432 -12804450 + CT-rich Low_complexity Low_complexity 3 45 0 2589 55 0 0 chr20 59349446 59349757 -12804125 + AluY SINE Alu 1 311 0 1354 176 72 15 chr20 59349766 59350028 -12803854 - AluJo SINE Alu -35 277 1 378 238 20 30 chr20 59350134 59350235 -12803647 - MIR SINE MIR -142 120 21 636 248 30 61 chr20 59350492 59350505 -12803377 - MER58A DNA MER1_type -2196 224 212 2250 90 0 0 chr20 59350505 59350804 -12803078 - AluSx SINE Alu -1 311 13 636 248 30 61 chr20 59350804 59351020 -12802862 - MER58A DNA MER1_type -2208 212 2 23 0 0 0 chr20 59351078 59351101 -12802781 + AT_rich Low_complexity Low_complexity 1 23 0 298 320 48 61 chr20 59351679 59351826 -12802056 + MIR SINE MIR 21 165 -97 643 315 15 0 chr20 59351864 59352064 -12801818 - MIR SINE MIR -1 261 59 1074 268 109 50 chr20 59352442 59353020 -12800862 - MLT1L LTR MaLR -2 613 2 681 226 19 7 chr20 59353147 59353302 -12800580 + MIR SINE MIR 72 228 -34 889 244 98 49 chr20 59353333 59353360 -12800522 - MER102b DNA MER1_type -1105 323 299 468 298 0 9 chr20 59353360 59353474 -12800408 + MER81 DNA DNA 2 114 0 889 244 98 49 chr20 59353474 59353753 -12800129 - MER102b DNA MER1_type -1129 299 2 1795 145 3 3 chr20 59354283 59354566 -12799316 + AluSx SINE Alu 1 283 -29 333 0 0 0 chr20 59354568 59354605 -12799277 + (CA)n Simple_repeat Simple_repeat 2 38 0 * 360 43 0 0 chr20 59354604 59354650 -12799232 + (GA)n Simple_repeat Simple_repeat 2 47 0 1244 235 137 9 chr20 59355089 59355549 -12798333 + MER113 DNA MER1_type? 1 519 -2 206 255 85 0 chr20 59355927 59355974 -12797908 - L2 LINE L2 -3 3269 3219 333 309 59 22 chr20 59356133 59356269 -12797613 + L1ME LINE L1 352 492 -5924 668 329 32 42 chr20 59356764 59357144 -12796738 + LTR16C LTR ERVL 115 490 -1 1050 278 105 24 chr20 59357294 59358151 -12795731 + L1ME LINE L1 899 2031 -4576 481 176 0 0 chr20 59358262 59358336 -12795546 - Tigger2a DNA MER2_type 0 434 361 756 156 8 23 chr20 59358359 59358487 -12795395 - FLAM_C SINE Alu -16 127 2 2324 126 32 32 chr20 59358488 59358644 -12795238 - Tigger2a DNA MER2_type -2327 381 226 455 0 0 0 chr20 59358644 59358698 -12795184 + L1PA3 LINE L1 6099 6152 -3 2324 126 32 32 chr20 59358698 59358921 -12794961 - Tigger2a DNA MER2_type -2481 227 2 240 35 0 0 chr20 59359056 59359085 -12794797 + (TG)n Simple_repeat Simple_repeat 2 30 0 444 77 0 0 chr20 59359118 59359183 -12794699 + (TG)n Simple_repeat Simple_repeat 2 66 0 1122 174 5 19 chr20 59359189 59359396 -12794486 - AluJb SINE Alu -24 288 85 2074 247 100 30 chr20 59359408 59359829 -12794053 + L1ME LINE L1 2241 2631 -3795 2156 101 3 3 chr20 59359829 59360127 -12793755 - AluSp SINE Alu -13 300 3 2074 247 100 30 chr20 59360127 59360676 -12793206 + L1ME LINE L1 2631 3255 -3171 366 227 34 0 chr20 59360676 59360764 -12793118 + L1ME LINE L1 248 338 -6269 309 222 0 0 chr20 59360830 59360893 -12792989 + L1ME LINE L1 1239 1301 -5115 597 216 46 13 chr20 59360898 59361051 -12792831 + L1ME1 LINE L1 6007 6164 -2 2055 115 3 13 chr20 59361060 59361372 -12792510 + AluSp SINE Alu 1 309 -4 4337 253 87 48 chr20 59361374 59363353 -12790529 + L1ME LINE L1 3247 5388 -1062 2076 103 10 0 chr20 59363353 59363653 -12790229 - AluSc SINE Alu -6 303 1 4337 253 87 48 chr20 59363653 59364759 -12789123 + L1ME LINE L1 5388 6450 0 489 297 94 93 chr20 59364796 59365570 -12788312 - L2 LINE L2 -5 3267 2483 24 0 0 0 chr20 59366517 59366541 -12787341 + AT_rich Low_complexity Low_complexity 1 24 0 1057 169 0 0 chr20 59366652 59366829 -12787053 - FRAM SINE Alu -7 169 1 2388 68 3 3 chr20 59366843 59367154 -12786728 - AluSp SINE Alu -2 311 1 1835 130 38 0 chr20 59469758 59470019 -12683863 - AluSx SINE Alu -12 300 30 271 287 19 102 chr20 59470386 59470494 -12683388 + L2 LINE L2 3214 3312 -1 1072 83 8 0 chr20 59470635 59470768 -12683114 + AluSq/x SINE Alu 1 134 -178 2327 105 3 3 chr20 59470797 59471102 -12682780 + AluSg SINE Alu 1 305 -5 252 171 40 151 chr20 59471214 59471366 -12682516 - L1MC2 LINE L1 0 6344 6210 216 0 0 0 chr20 59471562 59471586 -12682296 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2447 90 3 0 chr20 59471607 59471917 -12681965 - AluY SINE Alu 0 311 1 2275 120 3 0 chr20 59471984 59472292 -12681590 - AluSx SINE Alu -3 309 1 1097 156 6 6 chr20 59472326 59472499 -12681383 - AluJo SINE Alu -139 173 1 300 219 16 73 chr20 59472831 59472954 -12680928 - MIR3 SINE MIR -8 200 85 2151 121 0 0 chr20 59473067 59473380 -12680502 - AluSx SINE Alu 0 313 1 1157 191 34 5 chr20 59473612 59473821 -12680061 - MER20 DNA MER1_type -4 215 1 1949 105 77 18 chr20 59473876 59474162 -12679720 - AluSx SINE Alu -9 303 1 282 282 0 0 chr20 59474222 59474300 -12679582 - MER113 DNA MER1_type? -213 308 231 2365 71 0 0 chr20 59474332 59474612 -12679270 + AluY SINE Alu 1 280 -31 1635 160 15 15 chr20 59474612 59474880 -12679002 - AluJb SINE Alu -29 283 15 210 311 233 0 chr20 59474961 59475064 -12678818 - L2 LINE L2 -2 3270 3144 2333 84 3 35 chr20 59475087 59475398 -12678484 + AluSp SINE Alu 1 301 -12 883 191 167 14 chr20 59475435 59475723 -12678159 + LTR37A LTR ERV1 46 377 -49 258 132 0 0 chr20 59475723 59475761 -12678121 - Tigger1 DNA MER2_type 0 2418 2381 2069 104 24 6 chr20 59475761 59476089 -12677793 + LTR56 LTR ERV1 1 334 -111 1239 173 169 8 chr20 59476089 59476338 -12677544 + AluJb SINE Alu 1 289 -13 1766 177 0 0 chr20 59476348 59476614 -12677268 + AluJb SINE Alu 1 266 -46 342 250 37 9 chr20 59476699 59476807 -12677075 + LTR23 LTR ERV1 327 437 0 5079 125 122 136 chr20 59476807 59476941 -12676941 - Tigger1 DNA MER2_type -34 2384 2250 2332 102 0 10 chr20 59476941 59477254 -12676628 + AluSg SINE Alu 1 310 0 5079 125 122 136 chr20 59477254 59477521 -12676361 - Tigger1 DNA MER2_type -168 2250 1981 2276 85 0 20 chr20 59477521 59477816 -12676066 + AluY SINE Alu 1 289 -22 5079 125 122 136 chr20 59477816 59477961 -12675921 - Tigger1 DNA MER2_type -437 1981 1835 749 159 45 8 chr20 59477961 59478093 -12675789 - AluJo SINE Alu -175 137 1 5079 125 122 136 chr20 59478093 59478341 -12675541 - Tigger1 DNA MER2_type -583 1835 1585 4262 88 9 0 chr20 59478341 59478888 -12674994 + MER41A LTR ERV1 3 554 0 5079 125 122 136 chr20 59478888 59479013 -12674869 - Tigger1 DNA MER2_type -833 1585 1460 2414 81 0 3 chr20 59479013 59479311 -12674571 - AluSg SINE Alu -13 297 1 5079 125 122 136 chr20 59479311 59479437 -12674445 - Tigger1 DNA MER2_type -958 1460 1334 1936 131 55 0 chr20 59479437 59479712 -12674170 + AluSx SINE Alu 3 292 -20 5079 125 122 136 chr20 59479712 59480060 -12673822 - Tigger1 DNA MER2_type -1084 1334 875 2114 132 3 3 chr20 59480060 59480364 -12673518 - AluSp SINE Alu -9 304 1 5079 125 122 136 chr20 59480364 59480393 -12673489 - Tigger1 DNA MER2_type -1543 875 847 1727 109 0 0 chr20 59480394 59480615 -12673267 + AluSp SINE Alu 1 221 -92 2073 129 3 7 chr20 59480636 59480931 -12672951 - AluSx SINE Alu -18 294 1 481 176 20 0 chr20 59480933 59481035 -12672847 - MER7A DNA MER2_type -231 115 14 1159 196 132 0 chr20 59481298 59481533 -12672349 + AluJb SINE Alu 1 266 -46 1931 103 11 15 chr20 59481677 59481938 -12671944 + AluSq SINE Alu 1 260 -53 543 161 0 0 chr20 59481938 59482025 -12671857 + AluJb SINE Alu 211 297 -15 2160 113 17 0 chr20 59482025 59482318 -12671564 + AluSp SINE Alu 1 298 -15 216 0 0 0 chr20 59482680 59482704 -12671178 + (A)n Simple_repeat Simple_repeat 1 24 0 2316 87 3 0 chr20 59483871 59484158 -12669724 + AluSg SINE Alu 2 289 -21 1638 162 46 60 chr20 59484924 59485150 -12668732 - MER47A DNA MER2_type -1958 365 144 2383 99 7 0 chr20 59485150 59485453 -12668429 + AluSx SINE Alu 1 305 -7 1638 162 46 60 chr20 59485453 59485596 -12668286 - MER47A DNA MER2_type -2179 144 1 2583 49 0 13 chr20 59485766 59486071 -12667811 - AluSc SINE Alu -8 301 1 1675 144 46 25 chr20 59486071 59486216 -12667666 - AluJo SINE Alu -22 290 150 2421 68 0 26 chr20 59486216 59486523 -12667359 - AluY SINE Alu -12 299 1 1675 144 46 25 chr20 59486523 59486661 -12667221 - AluJo SINE Alu -162 150 1 841 202 75 32 chr20 59486681 59486933 -12666949 + L1MD2 LINE L1 6095 6357 -2 2223 105 7 0 chr20 59486942 59487264 -12666618 + AluSq SINE Alu 1 324 0 1929 131 4 7 chr20 59487270 59487545 -12666337 + AluSx SINE Alu 1 274 -38 861 150 0 0 chr20 59487809 59487936 -12665946 - FLAM_C SINE Alu -16 127 1 1827 159 0 11 chr20 59487969 59488252 -12665630 - AluJo SINE Alu -30 282 3 1174 189 58 50 chr20 59488288 59488453 -12665429 - AluJo SINE Alu -15 297 135 315 0 0 0 chr20 59488453 59488488 -12665394 + (TG)n Simple_repeat Simple_repeat 2 36 0 1174 189 58 50 chr20 59488488 59488538 -12665344 - AluJo SINE Alu -177 135 87 2305 65 0 28 chr20 59488538 59488852 -12665030 + AluY SINE Alu 1 306 0 1174 189 58 50 chr20 59488852 59488893 -12664989 - AluJo SINE Alu -225 87 37 2280 129 0 0 chr20 59492536 59492847 -12661035 + AluSx SINE Alu 1 311 -1 943 169 193 43 chr20 59493346 59493600 -12660282 + AluJb SINE Alu 1 292 -10 1640 101 123 0 chr20 59493630 59493858 -12660024 - AluSq SINE Alu -57 256 1 181 231 215 0 chr20 59494268 59494333 -12659549 - L2 LINE L2 -6 3266 3188 1914 123 95 0 chr20 59494425 59494710 -12659172 + AluSp SINE Alu 1 312 -1 522 245 146 21 chr20 59494770 59494962 -12658920 - MIR SINE MIR -2 260 45 190 54 27 27 chr20 59495164 59495201 -12658681 + (CGCGG)n Simple_repeat Simple_repeat 1 37 0 58 78 0 0 chr20 59495235 59495363 -12658519 + GC_rich Low_complexity Low_complexity 1 128 0 23 0 0 0 chr20 59495584 59495607 -12658275 + GC_rich Low_complexity Low_complexity 1 23 0 235 314 17 8 chr20 59496420 59496538 -12657344 + MER5A DNA MER1_type 63 181 -8 21 0 0 0 chr20 59496706 59496727 -12657155 + AT_rich Low_complexity Low_complexity 1 21 0 2283 68 0 4 chr20 59496932 59497241 -12656641 - AluSg1 SINE Alu 0 308 1 242 228 0 18 chr20 59497279 59497336 -12656546 + L2 LINE L2 3254 3309 -4 219 356 11 11 chr20 59497366 59497456 -12656426 - L2 LINE L2 0 3313 3224 454 276 55 37 chr20 59497476 59497639 -12656243 + MER5B DNA MER1_type 8 173 -5 2125 102 20 17 chr20 59497832 59498127 -12655755 - AluSq SINE Alu -17 296 1 1940 118 49 3 chr20 59498141 59498428 -12655454 - AluSp SINE Alu -13 300 1 187 271 7 118 chr20 59498682 59498780 -12655102 - MIR SINE MIR -31 231 152 2258 113 3 0 chr20 59498780 59499072 -12654810 + AluSx SINE Alu 1 293 -19 187 271 7 118 chr20 59499072 59499117 -12654765 - MIR SINE MIR -110 152 104 692 210 0 25 chr20 59499517 59499679 -12654203 + MIR SINE MIR 12 169 -93 876 285 18 38 chr20 59500131 59500188 -12653694 - L1MB7 LINE L1 -10 6174 6117 2450 74 0 3 chr20 59500188 59500486 -12653396 + AluY SINE Alu 1 297 -14 876 285 18 38 chr20 59500486 59500768 -12653114 - L1MB7 LINE L1 -67 6117 5842 1937 150 0 32 chr20 59500781 59501095 -12652787 + AluJb SINE Alu 1 304 -8 2077 134 0 13 chr20 59501123 59501291 -12652591 - AluSq SINE Alu -12 301 137 2287 96 14 0 chr20 59501291 59501582 -12652300 - AluSc SINE Alu -14 295 1 2077 134 0 13 chr20 59501582 59501718 -12652164 - AluSq SINE Alu -176 137 1 1376 165 72 67 chr20 59501719 59502026 -12651856 + MLT1D LTR MaLR 152 463 -42 2499 54 3 0 chr20 59502026 59502321 -12651561 - AluY SINE Alu -15 296 1 1376 165 72 67 chr20 59502321 59502359 -12651523 + MLT1D LTR MaLR 463 499 -6 2184 90 10 23 chr20 59502758 59503057 -12650825 - AluSc SINE Alu -13 296 2 2426 84 3 0 chr20 59503058 59503356 -12650526 - AluSx SINE Alu -13 299 1 2422 237 33 39 chr20 59503356 59503993 -12649889 + MER82 DNA MER2_type 21 653 0 2222 129 0 0 chr20 59504101 59504410 -12649472 - AluSq SINE Alu -4 309 1 2303 105 0 0 chr20 59504861 59505156 -12648726 - AluSg SINE Alu -15 295 1 362 248 103 0 chr20 59505615 59505760 -12648122 - MER113 DNA MER1_type? -309 212 53 1675 185 17 7 chr20 59505886 59506178 -12647704 - AluSx SINE Alu -17 295 1 1051 94 0 0 chr20 59506483 59506610 -12647272 + AluSq/x SINE Alu 1 127 -185 1095 130 49 5 chr20 59506624 59506809 -12647073 - MER20 DNA MER1_type -26 193 1 2029 157 13 37 chr20 59507041 59507210 -12646672 + MLT1B LTR MaLR 21 193 -197 2397 115 0 0 chr20 59507210 59507522 -12646360 + AluSx SINE Alu 1 312 0 2029 157 13 37 chr20 59507522 59507727 -12646155 + MLT1B LTR MaLR 193 386 -4 670 239 146 12 chr20 59507805 59507830 -12646052 - L1MB7 LINE L1 -449 5721 5701 2439 52 28 0 chr20 59507830 59508119 -12645763 - AluY SINE Alu -14 297 1 670 239 146 12 chr20 59508119 59508340 -12645542 - L1MB7 LINE L1 -469 5701 5442 2299 95 3 0 chr20 59508349 59508645 -12645237 - AluSg SINE Alu -13 297 1 2130 124 13 25 chr20 59508655 59508969 -12644913 - AluSx SINE Alu -2 310 1 1809 168 0 10 chr20 59508979 59509270 -12644612 - AluSx SINE Alu -24 288 1 2325 109 0 3 chr20 59509277 59509580 -12644302 - AluSp SINE Alu -10 303 2 2293 100 3 25 chr20 59509829 59510148 -12643734 + AluSx SINE Alu 1 312 0 1399 122 0 31 chr20 59510311 59510542 -12643340 - AluSg/x SINE Alu 0 319 95 2200 132 3 0 chr20 59510670 59510980 -12642902 - AluSq SINE Alu -2 311 1 359 311 25 8 chr20 59511301 59511423 -12642459 - L2 LINE L2 -1 3312 3189 354 266 119 21 chr20 59511476 59511619 -12642263 - MIR SINE MIR -33 229 73 443 276 53 33 chr20 59511736 59511888 -12641994 + L2 LINE L2 3159 3313 0 2454 29 11 4 chr20 59511913 59512228 -12641654 + AluY SINE Alu 1 317 0 1993 141 13 10 chr20 59512244 59512548 -12641334 + AluJo SINE Alu 5 309 -3 376 319 106 18 chr20 59513038 59513264 -12640618 + MIR SINE MIR 17 262 0 1960 116 22 47 chr20 59513616 59513935 -12639947 - AluSx SINE Alu -1 311 1 308 235 5 152 chr20 59514194 59514240 -12639642 - L1MC4a LINE L1 -1903 5905 5854 2225 92 17 10 chr20 59514240 59514532 -12639350 + AluSx SINE Alu 1 294 -18 308 235 5 152 chr20 59514532 59514594 -12639288 - L1MC4a LINE L1 -1954 5854 5838 652 197 39 0 chr20 59514594 59514721 -12639161 - FLAM_A SINE Alu -1 132 1 308 235 5 152 chr20 59514721 59514815 -12639067 - L1MC4a LINE L1 -1970 5838 5732 483 100 0 0 chr20 59514823 59514893 -12638989 + (TCTA)n Simple_repeat Simple_repeat 1 70 0 478 146 90 0 chr20 59514907 59514996 -12638886 - AluJ/FLAM SINE Alu -213 99 3 396 307 182 0 chr20 59515044 59515269 -12638613 - L1MC4a LINE L1 -2123 5685 5420 204 197 28 14 chr20 59515432 59515503 -12638379 + CT-rich Low_complexity Low_complexity 1 72 0 684 212 0 0 chr20 59515520 59515638 -12638244 - FLAM_C SINE Alu -15 118 1 2241 103 0 29 chr20 59516774 59516944 -12636938 - AluSx SINE Alu -9 303 145 2227 120 0 0 chr20 59516944 59517243 -12636639 - AluY SINE Alu -12 299 1 2241 103 0 29 chr20 59517243 59517384 -12636498 - AluSx SINE Alu -167 145 1 470 209 126 52 chr20 59517416 59517481 -12636401 - MER3 DNA MER1_type -4 205 146 2962 113 47 6 chr20 59517481 59517968 -12635914 - L1PA14 LINE L1 -9 6152 5646 470 209 126 52 chr20 59517968 59518093 -12635789 - MER3 DNA MER1_type -63 146 1 1012 170 18 40 chr20 59518101 59518325 -12635557 - MER20 DNA MER1_type 0 219 1 2009 130 29 44 chr20 59518347 59518515 -12635367 - AluSq SINE Alu -3 310 148 2188 82 34 14 chr20 59518515 59518807 -12635075 - AluSc SINE Alu -11 298 1 2009 130 29 44 chr20 59518807 59518953 -12634929 - AluSq SINE Alu -165 148 1 2156 140 13 0 chr20 59519339 59519646 -12634236 + AluSx SINE Alu 1 311 -1 2225 99 3 7 chr20 59519782 59520074 -12633808 - AluSc SINE Alu -18 291 1 422 94 31 0 chr20 59520100 59520164 -12633718 + Alu SINE Alu 2 67 -243 225 180 80 0 chr20 59520638 59520688 -12633194 - MER113 DNA MER1_type? -11 510 457 2121 112 37 0 chr20 59520697 59520991 -12632891 - AluSx SINE Alu -7 305 1 21 0 0 0 chr20 59520997 59521018 -12632864 + AT_rich Low_complexity Low_complexity 1 21 0 266 322 119 11 chr20 59521277 59521454 -12632428 + MIR SINE MIR 51 246 -16 2157 140 0 10 chr20 59521478 59521792 -12632090 + AluSx SINE Alu 2 312 0 221 298 33 8 chr20 59521795 59521916 -12631966 + (TA)n Simple_repeat Simple_repeat 2 125 0 198 103 0 0 chr20 59522097 59522126 -12631756 + (A)n Simple_repeat Simple_repeat 1 29 0 1834 140 6 63 chr20 59522185 59522362 -12631520 - AluSx SINE Alu -15 297 144 2210 125 0 0 chr20 59522362 59522658 -12631224 - AluSq SINE Alu -17 296 1 1834 140 6 63 chr20 59522658 59522795 -12631087 - AluSx SINE Alu -168 144 1 2311 117 0 19 chr20 59522797 59523113 -12630769 - AluJo SINE Alu -2 310 1 304 278 0 14 chr20 59523782 59523854 -12630028 + L1ME3A LINE L1 5527 5597 -2211 570 301 38 41 chr20 59524824 59524921 -12628961 + MER102b DNA MER1_type 43 139 -1289 2308 99 7 13 chr20 59524921 59525225 -12628657 + AluSx SINE Alu 1 302 -10 570 301 38 41 chr20 59525225 59525393 -12628489 + MER102b DNA MER1_type 139 307 -34 402 273 0 36 chr20 59525628 59525738 -12628144 + MER5C DNA MER1_type 14 119 -205 2258 104 13 0 chr20 59525827 59526126 -12627756 + AluSx SINE Alu 1 303 -9 214 196 0 54 chr20 59526202 59526258 -12627624 + MER5C DNA MER1_type 272 324 0 213 139 20 77 chr20 59526996 59527051 -12626831 + MIR SINE MIR 84 143 -65 2428 94 10 0 chr20 59527303 59527601 -12626281 - AluSx SINE Alu -11 301 1 593 229 13 88 chr20 59527819 59527975 -12625907 + L1ME3A LINE L1 5961 6096 -74 993 138 6 12 chr20 59527975 59528142 -12625740 + L1PA15 LINE L1 6000 6165 0 593 229 13 88 chr20 59528142 59528212 -12625670 + L1ME3A LINE L1 6096 6170 0 2361 98 0 7 chr20 59528457 59528764 -12625118 - AluSq SINE Alu 0 313 9 1638 115 4 4 chr20 59528765 59528991 -12624891 + AluSp SINE Alu 78 303 -10 1603 181 18 11 chr20 59528991 59529131 -12624751 - AluJb SINE Alu -34 278 141 2204 91 17 0 chr20 59529131 59529310 -12624572 - AluY SINE Alu 0 312 124 216 0 0 0 chr20 59529310 59529334 -12624548 + (TTA)n Simple_repeat Simple_repeat 2 25 0 2204 91 17 0 chr20 59529334 59529461 -12624421 - AluY SINE Alu -188 124 1 1603 181 18 11 chr20 59529461 59529595 -12624287 - AluJb SINE Alu -171 141 1 326 339 27 9 chr20 59529748 59529860 -12624022 + L1MC/D LINE L1 5018 5131 -1015 1379 161 0 5 chr20 59529865 59530076 -12623806 + AluJb SINE Alu 85 294 -18 395 267 75 98 chr20 59530177 59530294 -12623588 + L1MC/D LINE L1 5255 5373 -2435 2525 81 0 0 chr20 59530294 59530603 -12623279 + AluY SINE Alu 1 309 -2 2381 89 0 6 chr20 59530607 59530920 -12622962 + AluY SINE Alu 1 311 0 395 267 75 98 chr20 59530920 59531052 -12622830 + L1MC/D LINE L1 5376 5503 -2305 2081 113 7 13 chr20 59531171 59531473 -12622409 + AluSq SINE Alu 14 313 0 5897 49 8 4 chr20 59531479 59532256 -12621626 + L1PA5 LINE L1 5374 6153 -1 1987 100 0 0 chr20 59532532 59532803 -12621079 + AluSx SINE Alu 1 271 -41 1702 147 25 11 chr20 59533370 59533655 -12620227 + AluJo SINE Alu 6 294 -18 270 0 0 0 chr20 59533655 59533685 -12620197 + (TGAA)n Simple_repeat Simple_repeat 3 32 0 861 208 9 57 chr20 59533883 59534095 -12619787 + MIR SINE MIR 32 233 -29 2128 132 3 0 chr20 59534190 59534501 -12619381 + AluSx SINE Alu 1 312 0 1035 84 0 107 chr20 59535422 59535600 -12618282 - AluSg/x SINE Alu -17 293 135 2262 93 7 3 chr20 59535708 59536018 -12617864 + AluSx SINE Alu 1 311 -1 2234 82 0 0 chr20 59536018 59536311 -12617571 + AluY SINE Alu 1 293 -18 2219 97 0 7 chr20 59537064 59537364 -12616518 + AluSx SINE Alu 1 298 -14 205 216 0 0 chr20 59537365 59537402 -12616480 - L2 LINE L2 -4 3309 3273 4065 160 19 3 chr20 59537436 59538155 -12615727 + L1MB3 LINE L1 5446 6176 -7 2079 120 0 0 chr20 59538407 59538707 -12615175 + AluSx SINE Alu 9 308 -4 248 325 45 77 chr20 59539186 59539417 -12614465 - L2 LINE L2 -339 2975 2753 835 201 6 12 chr20 59539417 59539581 -12614301 - FAM SINE Alu -12 163 1 248 325 45 77 chr20 59539581 59539635 -12614247 - L2 LINE L2 -561 2753 2699 317 335 86 20 chr20 59540140 59540292 -12613590 + MIR SINE MIR 31 192 -70 777 253 21 5 chr20 59540354 59540548 -12613334 + MIR SINE MIR 23 219 -43 1900 93 93 0 chr20 59541086 59541364 -12612518 + AluSx SINE Alu 1 304 -8 255 93 0 0 chr20 59543115 59543158 -12610724 + (TG)n Simple_repeat Simple_repeat 2 44 0 504 283 104 5 chr20 59543863 59544075 -12609807 - MIR SINE MIR 0 262 30 1544 166 29 7 chr20 59544121 59544399 -12609483 + AluJb SINE Alu 1 284 -28 317 123 123 0 chr20 59544408 59544465 -12609417 - L2 LINE L2 -16 3256 3193 2041 106 30 10 chr20 59544936 59545237 -12608645 + AluSq SINE Alu 1 307 -6 22 70 0 0 chr20 59545298 59545341 -12608541 + AT_rich Low_complexity Low_complexity 1 43 0 2295 81 0 0 chr20 59545522 59545820 -12608062 - AluSg SINE Alu -12 298 1 1569 198 0 3 chr20 59546118 59546421 -12607461 + AluJo SINE Alu 1 302 -10 2245 82 3 0 chr20 59546429 59546723 -12607159 + AluSp SINE Alu 2 296 -17 22 0 0 0 chr20 59547278 59547300 -12606582 + AT_rich Low_complexity Low_complexity 1 22 0 703 135 54 0 chr20 59547765 59547876 -12606006 + FLAM_C SINE Alu 2 118 -25 2051 96 27 7 chr20 59547897 59548190 -12605692 + AluSg SINE Alu 1 299 -11 408 71 0 0 chr20 59548233 59548289 -12605593 + (TG)n Simple_repeat Simple_repeat 2 57 0 382 75 50 138 chr20 59549026 59549106 -12604776 + MER45A DNA AcHobo 104 176 -2 23 0 0 0 chr20 59549623 59549646 -12604236 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr20 59550121 59550142 -12603740 + AT_rich Low_complexity Low_complexity 1 21 0 2283 93 3 0 chr20 59550378 59550690 -12603192 + AluSp SINE Alu 1 313 0 189 240 0 20 chr20 59552082 59552132 -12601750 + MIR SINE MIR 189 237 -25 219 351 11 11 chr20 59552170 59552264 -12601618 + MIR SINE MIR 46 139 -123 1518 215 38 0 chr20 59552358 59552651 -12601231 + AluJb SINE Alu 1 304 -8 838 213 19 0 chr20 59553001 59553161 -12600721 + MER45A DNA AcHobo 16 178 0 303 294 134 0 chr20 59553343 59553462 -12600420 - MIR SINE MIR -38 224 90 226 319 109 17 chr20 59553594 59553713 -12600169 + L2 LINE L2 3106 3235 -37 734 221 21 0 chr20 59553758 59553903 -12599979 - FRAM SINE Alu -15 151 4 842 129 0 50 chr20 59554049 59554188 -12599694 + FLAM_C SINE Alu 1 132 -1 1911 131 0 3 chr20 59554332 59554646 -12599236 + AluSx SINE Alu 1 313 0 1269 208 42 53 chr20 59554646 59555079 -12598803 + L1MC4 LINE L1 7489 7916 -126 1959 99 0 0 chr20 59555112 59555375 -12598507 + AluSx SINE Alu 1 263 -49 1041 172 19 19 chr20 59555409 59555618 -12598264 + AluJb SINE Alu 86 294 -18 377 254 10 5 chr20 59555619 59555740 -12598142 + L1MC4 LINE L1 7900 7992 -3 2225 97 0 3 chr20 59555899 59556199 -12597683 + AluSq SINE Alu 1 299 -14 1510 112 5 5 chr20 59557732 59557955 -12595927 - AluSg/x SINE Alu -8 302 80 2344 60 0 7 chr20 59557955 59558253 -12595629 - AluY SINE Alu -14 297 1 611 216 133 33 chr20 59559307 59559488 -12594394 - MIR SINE MIR -23 239 41 2113 69 18 0 chr20 59559788 59560063 -12593819 - AluSc SINE Alu -8 301 22 1818 132 0 42 chr20 59560065 59560256 -12593626 - AluJb SINE Alu -15 297 100 192 77 0 0 chr20 59560256 59560282 -12593600 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1926 72 53 0 chr20 59560282 59560546 -12593336 - AluSx SINE Alu -33 279 2 1818 132 0 42 chr20 59560546 59560663 -12593219 - AluJb SINE Alu -210 102 1 357 133 67 0 chr20 59561544 59561604 -12592278 - AluSq/x SINE Alu -155 147 84 271 130 37 19 chr20 59561850 59561904 -12591978 + L1ME2 LINE L1 5940 5994 -170 238 118 0 0 chr20 59561939 59561973 -12591909 + MER3 DNA MER1_type 16 49 -160 416 257 0 0 chr20 59561973 59562082 -12591800 + L1ME2 LINE L1 6055 6163 -1 997 98 0 0 chr20 59562194 59562327 -12591555 + FLAM_C SINE Alu 1 133 -10 899 164 6 18 chr20 59562371 59562536 -12591346 + AluSg/x SINE Alu 119 281 -29 481 300 100 35 chr20 59562606 59562782 -12591100 - MIR SINE MIR -10 252 56 2047 97 17 3 chr20 59562782 59563071 -12590811 + AluSx SINE Alu 12 304 -8 481 300 100 35 chr20 59563071 59563124 -12590758 - MIR SINE MIR -206 56 8 2141 113 13 0 chr20 59563554 59563856 -12590026 + AluSg SINE Alu 2 307 -3 309 275 99 15 chr20 59564106 59564237 -12589645 + L1ME4a LINE L1 5901 6042 -79 2161 92 10 0 chr20 59564429 59564724 -12589158 + AluSx SINE Alu 15 312 0 2246 89 0 0 chr20 59564727 59565019 -12588863 + AluSg SINE Alu 1 292 -18 21 57 0 0 chr20 59565257 59565292 -12588590 + AT_rich Low_complexity Low_complexity 1 35 0 2363 68 0 0 chr20 59565332 59565625 -12588257 + AluSc SINE Alu 1 293 -16 1928 111 0 14 chr20 59565644 59565924 -12587958 + AluSx SINE Alu 1 276 -36 1920 140 7 0 chr20 59566433 59566733 -12587149 + AluSx SINE Alu 1 302 -10 652 246 7 0 chr20 59567218 59567356 -12586526 + AluJo SINE Alu 1 139 -173 2394 71 0 6 chr20 59567397 59567708 -12586174 + AluY SINE Alu 1 309 -2 3799 145 7 1 chr20 59567708 59568811 -12585071 + L1PB1 LINE L1 4630 5738 -413 550 75 0 0 chr20 59568812 59568879 -12585003 - AluY SINE Alu -134 177 111 2614 133 0 2 chr20 59568882 59569288 -12584594 + L1PB1 LINE L1 5745 6149 -2 816 161 7 0 chr20 59569299 59569436 -12584446 + AluJo SINE Alu 129 266 -46 2192 82 31 3 chr20 59569440 59569734 -12584148 - AluSc SINE Alu -7 302 1 2091 117 3 3 chr20 59569768 59570076 -12583806 + AluSq SINE Alu 1 308 -5 784 284 88 40 chr20 59570198 59570628 -12583254 + L2 LINE L2 2862 3312 -1 1002 198 8 75 chr20 59570786 59570993 -12582889 - MER46A DNA MER2_type -2495 236 47 2019 130 7 0 chr20 59570993 59571301 -12582581 - AluSx SINE Alu -2 310 1 1002 198 8 75 chr20 59571301 59571346 -12582536 - MER46A DNA MER2_type -2684 47 1 399 306 36 0 chr20 59571348 59571459 -12582423 + L2 LINE L2 3196 3310 -3 2381 78 3 0 chr20 59571911 59572220 -12581662 + AluSq SINE Alu 1 310 -3 1916 141 0 0 chr20 59572465 59572756 -12581126 - AluJo SINE Alu -19 293 3 255 125 0 0 chr20 59572776 59572824 -12581058 - Alu SINE Alu 0 308 261 1713 116 65 0 chr20 59572891 59573167 -12580715 + AluY SINE Alu 1 294 -17 1491 196 7 3 chr20 59573185 59573476 -12580406 + AluJb SINE Alu 3 294 -18 31 0 0 0 chr20 59573491 59573522 -12580360 + AT_rich Low_complexity Low_complexity 1 31 0 2075 108 0 3 chr20 59573529 59573825 -12580057 + AluSg SINE Alu 1 295 -15 2273 77 3 3 chr20 59574224 59574523 -12579359 + AluSx SINE Alu 1 299 -13 670 192 0 16 chr20 59574532 59574657 -12579225 + FRAM SINE Alu 34 156 -20 2135 102 0 0 chr20 59575345 59575629 -12578253 + AluSx SINE Alu 4 287 -25 2052 99 0 3 chr20 59576066 59576372 -12577510 + AluSc SINE Alu 1 305 0 1750 205 18 0 chr20 59576404 59576746 -12577136 - MER7A DNA MER2_type 0 346 1 688 214 0 8 chr20 59576767 59576893 -12576989 + FLAM_C SINE Alu 2 126 -17 2168 84 17 0 chr20 59576903 59577199 -12576683 + AluSg SINE Alu 1 301 -9 265 317 24 67 chr20 59577267 59577315 -12576567 - MIR SINE MIR -100 162 113 2181 93 0 3 chr20 59577315 59577616 -12576266 + AluSx SINE Alu 1 300 -12 265 317 24 67 chr20 59577616 59577731 -12576151 - MIR SINE MIR -149 113 6 204 250 40 26 chr20 59578597 59578673 -12575209 + L2 LINE L2 3236 3312 -1 237 300 0 14 chr20 59578673 59578743 -12575139 + GA-rich Low_complexity Low_complexity 1 69 0 789 194 14 0 chr20 59579108 59579252 -12574630 - MLT1A1 LTR MaLR 0 365 220 2140 102 0 3 chr20 59579259 59579552 -12574330 - AluSg SINE Alu -18 292 1 1475 193 17 7 chr20 59579552 59579852 -12574030 - AluJo SINE Alu -9 303 1 1724 163 3 23 chr20 59579861 59580162 -12573720 - AluJb SINE Alu -17 295 1 401 188 299 0 chr20 59580168 59580285 -12573597 - MLT1A1 LTR MaLR -213 152 1 228 67 0 0 chr20 59580525 59580555 -12573327 + (GAAA)n Simple_repeat Simple_repeat 3 32 0 308 336 56 8 chr20 59581071 59581196 -12572686 + L1MC4a LINE L1 5812 5942 -1866 238 282 115 26 chr20 59581391 59581469 -12572413 - L2 LINE L2 -20 3293 3209 664 297 87 36 chr20 59581714 59582311 -12571571 - L2 LINE L2 0 3272 2641 819 126 0 15 chr20 59582399 59582534 -12571348 - FLAM_C SINE Alu 0 133 1 599 202 0 0 chr20 59582539 59582648 -12571234 + L1MB8 LINE L1 6065 6173 -5 282 273 28 91 chr20 59582664 59582807 -12571075 - L2 LINE L2 -660 2654 2521 472 230 37 99 chr20 59582844 59583035 -12570847 - MIR SINE MIR -61 201 23 302 186 0 14 chr20 59583207 59583277 -12570605 + LTR41 LTR ERVL 1 69 -704 612 184 0 18 chr20 59583808 59583909 -12569973 + FLAM_A SINE Alu 22 122 -189 2247 110 0 7 chr20 59583909 59584210 -12569672 - AluSx SINE Alu -13 299 1 2262 105 0 19 chr20 59584301 59584615 -12569267 + AluSx SINE Alu 1 308 -4 1986 113 3 25 chr20 59584680 59584964 -12568918 + AluSx SINE Alu 1 278 -34 1952 58 0 17 chr20 59585229 59585469 -12568413 - AluY SINE Alu -11 300 65 548 285 144 53 chr20 59585508 59585925 -12567957 + MLT1K LTR MaLR 87 541 -47 1947 143 0 3 chr20 59585939 59586233 -12567649 - AluJo SINE Alu -15 297 5 1107 83 0 0 chr20 59586307 59586440 -12567442 + AluSq/x SINE Alu 1 133 -179 1726 156 16 38 chr20 59586440 59586754 -12567128 - AluJo SINE Alu -5 307 1 326 162 15 15 chr20 59586840 59586908 -12566974 - MER3 DNA MER1_type -1 208 141 * 540 186 47 64 chr20 59586906 59587078 -12566804 - MER3 DNA MER1_type -87 122 1 2310 95 13 0 chr20 59587178 59587482 -12566400 + AluSp SINE Alu 1 308 -5 1005 181 42 28 chr20 59587629 59587845 -12566037 + MER20 DNA MER1_type 1 219 0 1027 178 27 16 chr20 59587924 59588109 -12565773 + AluJo SINE Alu 1 187 -125 237 146 73 55 chr20 59588116 59588171 -12565711 - AluSg/x SINE Alu -44 256 201 2227 126 0 0 chr20 59588470 59588772 -12565110 - AluSq SINE Alu -7 306 5 582 247 7 0 chr20 59588933 59589079 -12564803 + MER117 DNA MER1_type 2 148 -49 2271 99 0 0 chr20 59589146 59589452 -12564430 - AluSx SINE Alu 0 306 1 1615 149 64 88 chr20 59590251 59590444 -12563438 + L1MB3 LINE L1 5772 5968 -215 2194 122 0 3 chr20 59590444 59590739 -12563143 + AluSx SINE Alu 1 294 -18 1615 149 64 88 chr20 59590739 59590967 -12562915 + L1MB3 LINE L1 5968 6183 0 552 296 59 0 chr20 59591600 59591786 -12562096 - MIR SINE MIR -28 234 38 230 239 119 0 chr20 59591845 59591912 -12561970 + MIR3 SINE MIR 1 75 -133 854 125 54 43 chr20 59592592 59592776 -12561106 - L1MB8 LINE L1 0 6178 5993 273 278 20 162 chr20 59593240 59593438 -12560444 - MER5B DNA MER1_type 0 178 9 207 222 0 22 chr20 59594350 59594395 -12559487 + CT-rich Low_complexity Low_complexity 2 45 0 180 235 0 0 chr20 59594396 59594464 -12559418 + C-rich Low_complexity Low_complexity 1 68 0 1882 131 3 59 chr20 59594468 59594774 -12559108 - AluJo SINE Alu -23 289 1 236 283 43 11 chr20 59595651 59595743 -12558139 - L1ME1 LINE L1 -4 6162 6068 2414 103 3 0 chr20 59595834 59596145 -12557737 - AluSx SINE Alu 0 312 1 228 330 22 11 chr20 59596199 59596290 -12557592 + MER5A DNA MER1_type 98 189 0 687 264 197 23 chr20 59596338 59596724 -12557158 + Charlie7 DNA MER1_type 24 476 -2136 2223 105 0 20 chr20 59596802 59597106 -12556776 - AluSx SINE Alu -13 299 2 1469 218 37 8 chr20 59597134 59597487 -12556395 - L1MB7 LINE L1 -22 6162 5800 2309 77 3 39 chr20 59597514 59597825 -12556057 + AluSg SINE Alu 1 300 -10 1900 171 3 13 chr20 59597924 59598239 -12555643 - AluJb SINE Alu 0 312 1 1021 123 20 0 chr20 59598365 59598511 -12555371 + AluSg/x SINE Alu 137 285 -27 2514 70 0 0 chr20 59598723 59599022 -12554860 - AluY SINE Alu -3 308 10 26 0 0 0 chr20 59599379 59599405 -12554477 + AT_rich Low_complexity Low_complexity 1 26 0 2419 69 3 3 chr20 59599463 59599754 -12554128 - AluSq SINE Alu -21 292 2 378 206 63 91 chr20 59599888 59599983 -12553899 + MER96B DNA MER1_type? 10 99 -318 2279 102 10 0 chr20 59599983 59600277 -12553605 - AluSx SINE Alu -14 298 2 378 206 63 91 chr20 59600277 59600356 -12553526 + MER96B DNA MER1_type? 99 179 -238 678 171 128 18 chr20 59600447 59600611 -12553271 - MER20 DNA MER1_type -31 188 7 1863 148 3 26 chr20 59600873 59601176 -12552706 + AluJb SINE Alu 1 296 -16 931 291 117 37 chr20 59603132 59603569 -12550313 - L2 LINE L2 0 3313 2842 2502 73 0 3 chr20 59603724 59604027 -12549855 + AluSx SINE Alu 1 302 -10 1508 69 32 0 chr20 59604178 59604366 -12549516 - AluSx SINE Alu -118 194 1 484 163 133 67 chr20 59604869 59605004 -12548878 + MER20 DNA MER1_type 1 144 -75 3668 200 14 40 chr20 59605908 59605968 -12547914 - L1MB8 LINE L1 -4 6174 6114 2165 117 3 3 chr20 59605968 59606267 -12547615 - AluSq SINE Alu -7 306 8 3668 200 14 40 chr20 59606267 59607121 -12546761 - L1MB8 LINE L1 -64 6114 5284 258 134 119 45 chr20 59607121 59607188 -12546694 - AluS SINE Alu -4 297 226 * 357 179 3 9 chr20 59607173 59607256 -12546626 - AluJ/FLAM SINE Alu -239 63 1 541 251 61 61 chr20 59607261 59607508 -12546374 - L1ME4a LINE L1 -188 5933 5687 987 181 0 18 chr20 59607794 59607965 -12545917 - FAM SINE Alu -7 168 1 490 120 80 0 chr20 59608684 59608759 -12545123 - AluS SINE Alu -230 82 2 1988 125 4 4 chr20 59608766 59609038 -12544844 - AluSx SINE Alu -39 273 2 2357 77 0 7 chr20 59609420 59609717 -12544165 - AluY SINE Alu -16 295 1 2066 114 40 33 chr20 59610598 59610897 -12542985 - AluSx SINE Alu -11 301 1 318 314 121 67 chr20 59610939 59611312 -12542570 - L1ME4a LINE L1 -48 6073 5681 34 42 0 0 chr20 59611312 59611360 -12542522 + AT_rich Low_complexity Low_complexity 1 48 0 462 66 26 40 chr20 59611494 59611570 -12542312 + Alu SINE Alu 230 304 -8 222 37 0 0 chr20 59611621 59611648 -12542234 + (TG)n Simple_repeat Simple_repeat 1 27 0 27 22 0 22 chr20 59611968 59611985 -12541897 + AT_rich Low_complexity Low_complexity 1 17 -27 2451 98 0 0 chr20 59611985 59612290 -12541592 - AluSg SINE Alu -5 305 1 27 22 0 22 chr20 59612290 59612317 -12541565 + AT_rich Low_complexity Low_complexity 17 44 0 2278 101 7 0 chr20 59612613 59612911 -12540971 - AluSx SINE Alu -12 300 1 250 315 109 0 chr20 59612911 59613003 -12540879 + MIR3 SINE MIR 79 180 -28 217 280 0 0 chr20 59613050 59613100 -12540782 - L2 LINE L2 -12 3260 3211 226 315 161 14 chr20 59613104 59613247 -12540635 - MIR SINE MIR -92 170 7 23 0 0 0 chr20 59613443 59613466 -12540416 + AT_rich Low_complexity Low_complexity 1 23 0 384 312 35 17 chr20 59613622 59613676 -12540206 - L1MA4 LINE L1 -302 5819 5767 1685 192 6 25 chr20 59613676 59613994 -12539888 - AluJo SINE Alu 0 312 1 384 312 35 17 chr20 59613994 59614161 -12539721 - L1MA4 LINE L1 -354 5767 5659 1226 148 0 0 chr20 59614787 59614963 -12538919 - AluSg/x SINE Alu -3 309 134 2280 118 0 6 chr20 59614963 59615277 -12538605 - AluSx SINE Alu 0 312 1 1938 125 14 20 chr20 59615411 59615708 -12538174 - AluSx SINE Alu -16 296 2 365 311 169 8 chr20 59615757 59616011 -12537871 + MER102a DNA MER1_type 36 330 0 2062 80 53 0 chr20 59616990 59617301 -12536581 - AluSx SINE Alu 0 330 6 2291 73 33 26 chr20 59617974 59618276 -12535606 + AluY SINE Alu 1 304 -7 2125 142 3 0 chr20 59618379 59618690 -12535192 - AluSx SINE Alu 0 312 1 1956 154 19 48 chr20 59618789 59619165 -12534717 - MLT1A1 LTR MaLR 0 365 1 216 283 20 71 chr20 59619487 59619586 -12534296 - MIR3 SINE MIR -4 204 111 1004 170 0 0 chr20 59619788 59619947 -12533935 - AluJb SINE Alu 0 312 154 434 209 11 112 chr20 59619947 59620086 -12533796 + MLT1D LTR MaLR 338 490 -15 2016 131 3 14 chr20 59620086 59620369 -12533513 + AluSx SINE Alu 1 280 -32 242 29 29 0 chr20 59620372 59620407 -12533475 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 434 209 11 112 chr20 59620407 59620450 -12533432 + MLT1D LTR MaLR 492 505 0 2415 77 0 49 chr20 59620686 59621011 -12532871 - AluSq SINE Alu -4 309 1 1303 213 14 44 chr20 59621022 59621175 -12532707 - AluJb SINE Alu -25 287 146 2133 123 0 0 chr20 59621175 59621459 -12532423 - AluSx SINE Alu -20 292 9 1303 213 14 44 chr20 59621459 59621601 -12532281 - AluJb SINE Alu -166 146 1 573 289 50 29 chr20 59621601 59621843 -12532039 + MER102a DNA MER1_type 81 327 -3 335 235 122 0 chr20 59621961 59622059 -12531823 + MIR SINE MIR 27 136 -126 941 215 39 0 chr20 59622070 59622275 -12531607 - MER20 DNA MER1_type -6 213 1 2234 93 4 0 chr20 59622461 59622740 -12531142 - AluSx SINE Alu -32 280 1 656 148 66 0 chr20 59623495 59623617 -12530265 - L1MB5 LINE L1 0 6174 6045 29 28 0 0 chr20 59623715 59623751 -12530131 + AT_rich Low_complexity Low_complexity 1 36 0 1168 178 0 0 chr20 59623768 59623959 -12529923 - AluJo SINE Alu -117 195 5 180 244 24 0 chr20 59624083 59624124 -12529758 - MER5B DNA MER1_type -35 143 102 3026 124 15 11 chr20 59624310 59624419 -12529463 + L1PB1 LINE L1 5674 5781 -370 477 0 0 0 chr20 59624419 59624472 -12529410 + (TA)n Simple_repeat Simple_repeat 1 53 0 3026 124 15 11 chr20 59624472 59624838 -12529044 + L1PB1 LINE L1 5781 6151 0 216 306 94 44 chr20 59624991 59625171 -12528711 + L2 LINE L2 3102 3290 -23 207 0 0 0 chr20 59625214 59625237 -12528645 + (T)n Simple_repeat Simple_repeat 1 23 0 1984 124 0 4 chr20 59625439 59625712 -12528170 - AluSx SINE Alu -16 296 25 613 261 114 14 chr20 59625723 59625978 -12527904 - MIR SINE MIR -15 193 21 281 220 23 4 chr20 59626065 59626151 -12527731 - MLT1E LTR MaLR -2 565 506 * 2062 176 118 5 chr20 59626136 59626569 -12527313 + MER44D DNA MER2_type 27 563 -42 617 188 19 6 chr20 59626655 59626815 -12527067 + CT-rich Low_complexity Low_complexity 1 162 0 1878 150 4 0 chr20 59626816 59627083 -12526799 - AluJb SINE Alu -39 273 6 845 267 127 27 chr20 59627104 59627583 -12526299 - MLT1E LTR MaLR -63 530 4 2304 98 7 0 chr20 59627674 59627969 -12525913 - AluSp SINE Alu -16 297 1 527 206 0 8 chr20 59628603 59628729 -12525153 + CT-rich Low_complexity Low_complexity 3 127 0 1902 192 0 0 chr20 59628768 59629080 -12524802 - AluJo SINE Alu 0 312 1 2433 88 0 3 chr20 59629390 59629698 -12524184 - AluSx SINE Alu 0 312 6 664 208 0 0 chr20 59629916 59630046 -12523836 + MER20 DNA MER1_type 33 162 -57 1759 167 19 38 chr20 59630168 59630486 -12523396 + AluJb SINE Alu 1 312 0 1106 204 75 100 chr20 59631392 59631833 -12522049 - LTR47B LTR ERVL 0 443 14 2168 121 7 0 chr20 59631833 59632123 -12521759 - AluSq SINE Alu -21 292 1 804 202 39 24 chr20 59632341 59632549 -12521333 - MER20 DNA MER1_type -1 218 8 369 298 97 0 chr20 59632676 59632800 -12521082 - MIR SINE MIR -115 147 12 912 187 34 14 chr20 59632887 59633096 -12520786 + MER20 DNA MER1_type 7 219 0 1702 256 58 26 chr20 59633645 59634211 -12519671 - MLT1E LTR MaLR 0 593 10 324 190 0 0 chr20 59634334 59634392 -12519490 - Charlie8 DNA MER1_type -3 2414 2357 227 368 16 0 chr20 59634477 59634602 -12519280 - Charlie8 DNA MER1_type -2195 222 96 698 310 59 22 chr20 59634950 59635273 -12518609 + L2 LINE L2 2809 3143 -170 2427 103 0 0 chr20 59635458 59635769 -12518113 - AluSq SINE Alu -2 311 1 791 140 7 37 chr20 59635877 59636013 -12517869 - FLAM_A SINE Alu 0 133 2 2208 135 0 3 chr20 59636026 59636337 -12517545 - AluSq SINE Alu -3 310 1 263 253 42 32 chr20 59636381 59636476 -12517406 + L2 LINE L2 3164 3259 -54 321 225 147 8 chr20 59636870 59636999 -12516883 - MIR SINE MIR -87 175 29 2171 126 7 0 chr20 59637517 59637819 -12516063 - AluSx SINE Alu -8 304 1 2305 110 0 22 chr20 59638727 59639045 -12514837 - AluSx SINE Alu -1 311 1 287 328 52 0 chr20 59639051 59639167 -12514715 - MIR3 SINE MIR -42 166 45 271 282 12 0 chr20 59639453 59639538 -12514344 + MIR SINE MIR 43 128 -134 318 370 0 8 chr20 59639722 59639841 -12514041 + MIR3 SINE MIR 3 120 -88 306 338 23 23 chr20 59640051 59640184 -12513698 - L1ME LINE L1 -459 5662 5530 2304 217 61 70 chr20 59641257 59641380 -12512502 - MER82 DNA MER2_type 0 653 530 2369 94 3 0 chr20 59641380 59641678 -12512204 - AluSq SINE Alu -14 299 1 2304 217 61 70 chr20 59641678 59642213 -12511669 - MER82 DNA MER2_type -123 530 1 751 232 53 48 chr20 59642227 59642434 -12511448 + MER58A DNA MER1_type 1 208 -16 425 344 7 0 chr20 59642448 59642602 -12511280 + MIR SINE MIR 38 192 -70 2476 80 3 3 chr20 59642655 59642957 -12510925 - AluSp SINE Alu -11 302 1 2131 119 7 3 chr20 59642967 59643262 -12510620 - AluSx SINE Alu -16 296 1 469 301 34 63 chr20 59644134 59644310 -12509572 + MIR SINE MIR 16 185 -77 2221 108 3 0 chr20 59644310 59644598 -12509284 - AluSx SINE Alu -15 297 9 469 301 34 63 chr20 59644598 59644660 -12509222 + MIR SINE MIR 185 247 -15 2344 102 0 10 chr20 59645299 59645603 -12508279 + AluSx SINE Alu 1 301 -11 2245 120 0 0 chr20 59645925 59646224 -12507658 + AluSx SINE Alu 1 299 -13 2166 118 23 0 chr20 59646608 59646912 -12506970 + AluSx SINE Alu 1 311 -1 388 208 212 57 chr20 59647197 59647409 -12506473 - L1MC4 LINE L1 0 8042 7798 288 283 82 94 chr20 59647520 59647912 -12505970 - L1MC4 LINE L1 -273 7769 7383 1823 192 0 0 chr20 59647943 59648255 -12505627 + AluSx SINE Alu 1 312 0 227 329 118 12 chr20 59649027 59649197 -12504685 + MIR SINE MIR 52 239 -23 264 313 172 8 chr20 59649361 59649489 -12504393 - MIR SINE MIR -18 244 96 2224 133 0 0 chr20 59649819 59650120 -12503762 + AluSx SINE Alu 1 301 -11 384 308 0 39 chr20 59650301 59650431 -12503451 + MIR SINE MIR 59 183 -79 240 300 83 42 chr20 59651927 59652047 -12501835 + MIR SINE MIR 119 243 -19 765 244 31 58 chr20 59652086 59652311 -12501571 + MIR SINE MIR 44 262 0 1152 286 109 9 chr20 59653342 59653589 -12500293 + L2 LINE L2 2807 3028 -285 288 0 0 0 chr20 59653589 59653621 -12500261 + (CA)n Simple_repeat Simple_repeat 2 33 0 1152 286 109 9 chr20 59653621 59653831 -12500051 + L2 LINE L2 3028 3310 -3 197 234 16 0 chr20 59654044 59654108 -12499774 + CT-rich Low_complexity Low_complexity 3 67 0 2369 109 0 0 chr20 59654480 59654782 -12499100 - AluSx SINE Alu -10 302 1 35 24 0 0 chr20 59655481 59655523 -12498359 + AT_rich Low_complexity Low_complexity 1 42 0 29 28 0 0 chr20 59655605 59655641 -12498241 + AT_rich Low_complexity Low_complexity 1 36 0 827 150 15 8 chr20 59655671 59655804 -12498078 - AluJ SINE Alu -35 277 144 1213 147 0 0 chr20 59655964 59656127 -12497755 - AluJ SINE Alu -147 165 3 2000 95 44 4 chr20 59656283 59656556 -12497326 - AluSg SINE Alu -26 284 1 28 0 0 0 chr20 59656560 59656588 -12497294 + AT_rich Low_complexity Low_complexity 1 28 0 2077 131 7 0 chr20 59656610 59656900 -12496982 - AluSx SINE Alu -9 303 12 2073 137 3 0 chr20 59656907 59657207 -12496675 - AluJb SINE Alu -11 301 1 202 282 27 55 chr20 59658312 59658422 -12495460 - L2 LINE L2 -104 3209 3103 2234 104 0 7 chr20 59658465 59658779 -12495103 + AluSg SINE Alu 1 310 0 489 208 39 39 chr20 59659639 59659793 -12494089 + MER106B DNA MER1_type 902 1055 -4 1854 184 3 3 chr20 59660607 59660917 -12492965 - AluJb SINE Alu 0 312 3 351 0 0 0 chr20 59661697 59661736 -12492146 + (TG)n Simple_repeat Simple_repeat 2 40 0 1675 159 22 7 chr20 59666155 59666452 -12487430 + AluJb SINE Alu 1 301 0 503 207 200 7 chr20 59666519 59666659 -12487223 + MER20 DNA MER1_type 52 218 -1 2024 123 35 0 chr20 59666661 59666945 -12486937 - AluSx SINE Alu -18 294 1 192 77 0 0 chr20 59667551 59667577 -12486305 + (A)n Simple_repeat Simple_repeat 1 26 0 548 284 128 44 chr20 59668698 59668818 -12485064 - L2 LINE L2 0 3313 3205 213 39 0 0 chr20 59668818 59668844 -12485038 + (TG)n Simple_repeat Simple_repeat 1 26 0 548 284 128 44 chr20 59668844 59669044 -12484838 - L2 LINE L2 -108 3205 2966 2441 105 0 0 chr20 59669244 59669549 -12484333 - AluSx SINE Alu -7 305 1 228 265 83 15 chr20 59669760 59669892 -12483990 - L2 LINE L2 -325 2947 2807 214 318 47 0 chr20 59671038 59671123 -12482759 + MIR SINE MIR 48 136 -126 2150 125 0 26 chr20 59671385 59671696 -12482186 - AluSx SINE Alu -9 303 1 1027 94 7 7 chr20 59672017 59672166 -12481716 + L1PA10 LINE L1 6020 6168 0 188 296 56 0 chr20 59672296 59672350 -12481532 + L2 LINE L2 3203 3259 -13 293 80 0 230 chr20 59672373 59672418 -12481464 - L1MB3 LINE L1 -6 6177 6123 1791 152 3 28 chr20 59672418 59672701 -12481181 - AluJo SINE Alu -16 296 21 293 80 0 230 chr20 59672701 59672712 -12481170 - L1MB3 LINE L1 -60 6123 6150 2421 97 0 0 chr20 59672712 59673023 -12480859 - AluSx SINE Alu 0 312 2 293 80 0 230 chr20 59673023 59673065 -12480817 - L1MB3 LINE L1 -32 6151 6101 2413 86 3 3 chr20 59673090 59673393 -12480489 + AluSc SINE Alu 1 303 -6 318 330 71 0 chr20 59673468 59673580 -12480302 - MIR SINE MIR -63 199 80 862 274 90 29 chr20 59673652 59674098 -12479784 - MLT1J LTR MaLR -34 477 5 1940 127 3 20 chr20 59674171 59674470 -12479412 - AluSx SINE Alu -18 294 1 226 255 20 88 chr20 59674703 59674805 -12479077 - L1ME3 LINE L1 -13 6149 6055 * 230 184 0 20 chr20 59674794 59674843 -12479039 - L1ME LINE L1 -536 5628 5581 * 710 253 37 6 chr20 59674807 59675004 -12478878 + L1ME LINE L1 5385 5591 -587 677 122 0 0 chr20 59675010 59675117 -12478765 + L1MB8 LINE L1 6070 6176 -2 1296 188 74 24 chr20 59675119 59675512 -12478370 - L1ME LINE L1 -656 5586 5176 324 151 0 0 chr20 59675496 59675569 -12478313 - L1ME LINE L1 -671 5491 5419 * 2332 107 0 3 chr20 59675672 59675981 -12477901 - AluSc SINE Alu -1 308 1 305 297 109 0 chr20 59675982 59676113 -12477769 - MIR3 SINE MIR -67 141 10 309 284 39 63 chr20 59676489 59676616 -12477266 - L2 LINE L2 -17 3296 3173 2138 73 0 7 chr20 59676664 59676936 -12476946 + AluY SINE Alu 35 304 -7 372 320 90 0 chr20 59677025 59677147 -12476735 + L2 LINE L2 3181 3313 0 * 603 259 65 95 chr20 59677118 59677488 -12476394 - L2 LINE L2 -118 3195 2837 193 346 59 10 chr20 59677830 59677931 -12475951 - MIR SINE MIR -44 218 113 217 300 38 88 chr20 59677931 59678091 -12475791 + MIR SINE MIR 54 205 -57 254 220 0 110 chr20 59678126 59678235 -12475647 - LTR67 LTR ERVL -1 556 460 226 190 86 17 chr20 59678522 59678580 -12475302 - LTR67 LTR ERVL -494 63 2 193 250 131 48 chr20 59678588 59678672 -12475210 + MIR SINE MIR 57 147 -61 292 247 14 27 chr20 59678786 59678859 -12475023 - MLT1L LTR MaLR -374 241 170 539 282 73 96 chr20 59679940 59680295 -12473587 - L2 LINE L2 0 3272 2926 1213 239 88 101 chr20 59680388 59680981 -12472901 - MLT1K LTR MaLR 0 588 4 1187 284 116 34 chr20 59681476 59682011 -12471871 - MLT1K LTR MaLR 0 588 10 2141 130 0 3 chr20 59682089 59682388 -12471494 - AluSx SINE Alu -3 309 12 391 303 55 14 chr20 59683367 59683512 -12470370 + MIR SINE MIR 33 183 -79 824 168 43 27 chr20 59683806 59683991 -12469891 - MER53 DNA DNA 0 189 2 387 298 186 33 chr20 59683996 59684425 -12469457 - MLT1K LTR MaLR -48 540 46 220 331 55 24 chr20 59684673 59684800 -12469082 - MIR SINE MIR -12 250 120 465 295 101 30 chr20 59684801 59685038 -12468844 - MLT1K LTR MaLR 0 588 335 726 285 71 58 chr20 59685106 59685618 -12468264 - MLT1K LTR MaLR -22 566 8 219 186 0 0 chr20 59685974 59686017 -12467865 + GA-rich Low_complexity Low_complexity 2 44 0 2467 76 0 3 chr20 59686416 59686718 -12467164 - AluSc SINE Alu -8 301 1 940 199 16 11 chr20 59686719 59686905 -12466977 - MER58A DNA MER1_type -9 215 29 241 209 75 0 chr20 59686994 59687061 -12466821 - L1ME2 LINE L1 -3 6161 6090 268 331 15 39 chr20 59687096 59687226 -12466656 - L1ME2 LINE L1 -152 6012 5886 2146 198 86 27 chr20 59687287 59687813 -12466069 + MLT1F1 LTR MaLR 11 567 0 318 182 0 0 chr20 59687832 59687898 -12465984 + (TTCA)n Simple_repeat Simple_repeat 1 66 0 346 308 10 0 chr20 59687989 59688093 -12465789 - MIR SINE MIR -110 152 48 885 243 29 5 chr20 59689012 59689218 -12464664 - MIR SINE MIR -25 237 27 281 67 0 22 chr20 59689222 59689267 -12464615 + (TTTTA)n Simple_repeat Simple_repeat 1 44 0 902 68 0 0 chr20 59689267 59689384 -12464498 - L1PA3 LINE L1 -24 6131 6015 2331 91 0 0 chr20 59689389 59689676 -12464206 - AluSg SINE Alu -23 287 1 927 290 48 10 chr20 59689782 59690075 -12463807 - MLT1J LTR MaLR -2 509 206 463 250 149 32 chr20 59690075 59690199 -12463683 + MIR SINE MIR 52 207 -55 2586 80 36 6 chr20 59690199 59690563 -12463319 + THE1C LTR MaLR 1 375 0 463 250 149 32 chr20 59690563 59690626 -12463256 + MIR SINE MIR 207 261 -1 341 272 68 87 chr20 59690637 59690902 -12462980 + L2 LINE L2 3012 3271 -1 874 278 80 14 chr20 59690949 59691312 -12462570 + L2 LINE L2 2923 3309 -4 524 253 90 36 chr20 59692245 59692411 -12461471 + MIR SINE MIR 29 203 -59 931 281 53 56 chr20 59692570 59693000 -12460882 - L2 LINE L2 -2 3311 2883 1343 217 243 0 chr20 59693032 59693465 -12460417 - MLT1F LTR MaLR 0 542 5 414 273 58 43 chr20 59693589 59693679 -12460203 - MIR SINE MIR -5 257 163 2272 101 48 22 chr20 59693679 59694034 -12459848 - THE1B LTR MaLR 0 364 1 414 273 58 43 chr20 59694034 59694082 -12459800 - MIR SINE MIR -99 163 117 733 210 224 5 chr20 59694582 59694796 -12459086 - MIR SINE MIR 0 262 2 836 156 10 73 chr20 59694816 59694977 -12458905 + MER3 DNA MER1_type 1 150 -59 2207 109 10 16 chr20 59694977 59695290 -12458592 - AluSx SINE Alu 0 312 2 836 156 10 73 chr20 59695290 59695320 -12458562 + MER3 DNA MER1_type 150 180 -29 728 231 202 0 chr20 59695689 59695897 -12457985 + MIR SINE MIR 13 262 0 330 252 129 13 chr20 59696940 59697095 -12456787 + MIR SINE MIR 11 183 -79 358 305 15 8 chr20 59697253 59697384 -12456498 - MIR SINE MIR -14 248 117 1045 169 25 10 chr20 59697454 59697655 -12456227 + MER3 DNA MER1_type 6 209 0 467 210 0 0 chr20 59697921 59698002 -12455880 - MER81 DNA DNA -32 82 2 247 314 47 0 chr20 59698128 59698214 -12455668 + MIR SINE MIR 94 183 -79 201 74 0 0 chr20 59699111 59699138 -12454744 + (TCC)n Simple_repeat Simple_repeat 1 27 0 27 29 0 0 chr20 59700130 59700164 -12453718 + GC_rich Low_complexity Low_complexity 1 34 0 315 0 0 0 chr20 59701013 59701048 -12452834 + (CTTG)n Simple_repeat Simple_repeat 1 35 0 956 111 23 0 chr20 59701048 59701219 -12452663 + CT-rich Low_complexity Low_complexity 3 177 0 888 268 5 0 chr20 59702209 59702422 -12451460 + MIR SINE MIR 44 257 -5 494 303 8 0 chr20 59702592 59702724 -12451158 + MIR SINE MIR 117 249 -13 202 284 206 10 chr20 59702728 59702830 -12451052 - MIR SINE MIR -64 144 23 362 301 37 25 chr20 59702881 59703044 -12450838 - MIR SINE MIR -48 214 50 201 214 339 9 chr20 59703649 59703761 -12450121 + MIR SINE MIR 13 161 -101 1915 169 0 3 chr20 59704183 59704485 -12449397 - AluJo SINE Alu -11 301 1 604 247 16 101 chr20 59704528 59704775 -12449107 + L2 LINE L2 3047 3272 0 272 318 253 0 chr20 59705059 59705229 -12448653 - MIR SINE MIR -1 261 49 992 311 49 45 chr20 59705971 59706212 -12447670 - L2 LINE L2 -9 3304 3066 1408 253 37 24 chr20 59706212 59706671 -12447211 - MLT1C LTR MaLR 0 467 3 992 311 49 45 chr20 59706671 59706937 -12446945 - L2 LINE L2 -247 3066 2799 2515 71 0 3 chr20 59706937 59707232 -12446650 - AluY SINE Alu -17 294 1 992 311 49 45 chr20 59707232 59707485 -12446397 - L2 LINE L2 -514 2799 2549 253 329 29 29 chr20 59707835 59707972 -12445910 + MIR SINE MIR 83 219 -43 2668 43 0 3 chr20 59708850 59709149 -12444733 - AluY SINE Alu -12 299 2 858 231 60 70 chr20 59709292 59709521 -12444361 - MER102b DNA MER1_type -1100 328 101 1304 112 33 5 chr20 59709521 59709735 -12444147 + L1PA10 LINE L1 5949 6168 0 858 231 60 70 chr20 59709735 59709803 -12444079 - MER102b DNA MER1_type -1327 101 34 315 200 40 40 chr20 59710189 59710264 -12443618 - L1MC4 LINE L1 -1319 6723 6649 662 143 0 0 chr20 59710264 59710369 -12443513 - AluJ SINE Alu -27 285 181 877 110 0 0 chr20 59710369 59710478 -12443404 - AluJ SINE Alu -190 122 14 2425 85 0 0 chr20 59710504 59710798 -12443084 - AluY SINE Alu -17 294 1 28 48 0 0 chr20 59710798 59710840 -12443042 + AT_rich Low_complexity Low_complexity 1 42 0 1423 156 23 30 chr20 59710881 59711144 -12442738 + AluJb SINE Alu 44 304 -8 982 182 78 21 chr20 59711146 59711388 -12442494 + MER96B DNA MER1_type? 162 417 0 1615 137 24 27 chr20 59711624 59711916 -12441966 + MER47A DNA MER2_type 1 291 -75 2329 96 0 13 chr20 59711916 59712239 -12441643 - AluSq SINE Alu 0 313 1 462 172 97 0 chr20 59712241 59712334 -12441548 - AluJo SINE Alu -14 298 197 985 124 7 21 chr20 59712337 59712482 -12441400 - AluJo SINE Alu -169 143 1 351 241 12 12 chr20 59712482 59712565 -12441317 + MER47A DNA MER2_type 284 366 0 697 206 5 88 chr20 59712573 59712767 -12441115 - MER45A DNA AcHobo 0 178 1 463 290 77 18 chr20 59712804 59712973 -12440909 - MIR3 SINE MIR -9 199 21 1219 112 0 0 chr20 59713101 59713294 -12440588 + AluSp SINE Alu 131 323 0 724 226 11 44 chr20 59713350 59713531 -12440351 - FAM SINE Alu 0 175 1 1713 260 89 39 chr20 59713796 59713872 -12440010 - L2 LINE L2 0 3313 3242 978 132 21 26 chr20 59713872 59714062 -12439820 - MER53 DNA DNA 0 189 1 1713 260 89 39 chr20 59714062 59714999 -12438883 - L2 LINE L2 -71 3242 2238 553 325 62 20 chr20 59715254 59715771 -12438111 + L2 LINE L2 2542 3078 -194 879 121 26 17 chr20 59716678 59717033 -12436849 + (TCCA)n Simple_repeat Simple_repeat 1 358 0 387 251 78 89 chr20 59717097 59717288 -12436594 - MLT1K LTR MaLR -398 190 2 807 180 11 44 chr20 59717706 59717889 -12435993 - MER5B DNA MER1_type -1 177 1 327 231 115 10 chr20 59717946 59718050 -12435832 + L2 LINE L2 3199 3313 0 466 260 123 7 chr20 59718205 59718257 -12435625 - MER5B DNA MER1_type -6 172 127 2662 58 0 0 chr20 59718257 59718568 -12435314 + AluY SINE Alu 1 311 0 466 260 123 7 chr20 59718568 59718669 -12435213 - MER5B DNA MER1_type -51 127 1 324 285 22 27 chr20 59718777 59718914 -12434968 + MER5A DNA MER1_type 1 146 -43 369 265 179 21 chr20 59718940 59719280 -12434602 + L2 LINE L2 2869 3262 -51 231 215 31 0 chr20 59719735 59719800 -12434082 + C-rich Low_complexity Low_complexity 2 68 0 22 35 0 0 chr20 59719994 59720023 -12433859 + GC_rich Low_complexity Low_complexity 1 29 0 180 0 0 0 chr20 59721194 59721214 -12432668 + (CAGCC)n Simple_repeat Simple_repeat 1 20 0 1000 178 16 5 chr20 59721888 59722079 -12431803 - L1MC3 LINE L1 -6 7779 7587 853 187 264 42 chr20 59722084 59722231 -12431651 - L1MC3 LINE L1 -320 7465 7352 2071 127 7 0 chr20 59722231 59722530 -12431352 + AluSq SINE Alu 1 301 -12 853 187 264 42 chr20 59722530 59722666 -12431216 - L1MC3 LINE L1 -433 7352 7119 1678 172 3 49 chr20 59722745 59723071 -12430811 + AluJo SINE Alu 1 311 -1 532 244 9 0 chr20 59723414 59723529 -12430353 - MIR SINE MIR -59 203 88 490 341 28 0 chr20 59723617 59723796 -12430086 + MIR SINE MIR 23 206 -56 199 273 284 0 chr20 59723883 59723971 -12429911 - L2 LINE L2 0 3272 3160 488 296 174 22 chr20 59723977 59724660 -12429222 - L1M4 LINE L1 -1964 4182 3381 283 355 116 0 chr20 59725459 59725597 -12428285 - L2 LINE L2 -3 3269 3116 225 0 0 0 chr20 59725620 59725645 -12428237 + (TG)n Simple_repeat Simple_repeat 2 26 0 1004 248 133 3 chr20 59727536 59727903 -12425979 + L1ME3 LINE L1 5747 6161 -1 2263 102 7 0 chr20 59727911 59728206 -12425676 + AluSq SINE Alu 1 297 -16 288 297 59 8 chr20 59728311 59728429 -12425453 + MIR3 SINE MIR 48 171 -37 788 229 73 8 chr20 59730197 59730442 -12423440 + MIR SINE MIR 2 262 0 557 175 0 58 chr20 59731349 59731469 -12422413 + MER20 DNA MER1_type 3 115 -104 348 247 34 0 chr20 59731469 59731558 -12422324 + MIR SINE MIR 171 262 0 403 332 20 45 chr20 59731606 59731850 -12422032 - L2 LINE L2 -97 3175 2938 2370 100 3 6 chr20 59732075 59732386 -12421496 + AluSx SINE Alu 1 310 -2 544 215 15 8 chr20 59732473 59732603 -12421279 + L1ME1 LINE L1 6026 6156 -10 910 206 78 12 chr20 59732631 59732874 -12421008 - MER113 DNA MER1_type? -232 289 31 376 305 24 36 chr20 59733608 59733775 -12420107 - MIR3 SINE MIR -7 201 37 435 327 6 6 chr20 59734001 59734160 -12419722 + (TG)n Simple_repeat Simple_repeat 2 160 0 941 251 37 88 chr20 59734177 59734437 -12419445 - L1MC4a LINE L1 -1898 5910 5673 1430 177 90 38 chr20 59734437 59734725 -12419157 - AluJo SINE Alu -9 303 1 941 251 37 88 chr20 59734725 59734839 -12419043 - L1MC4a LINE L1 -2135 5673 5555 224 301 36 12 chr20 59734916 59734999 -12418883 - L2 LINE L2 0 3272 3188 233 273 40 74 chr20 59735238 59735344 -12418538 - L2 LINE L2 -313 3000 2901 1788 170 17 7 chr20 59735344 59735638 -12418244 + AluJb SINE Alu 2 298 -14 233 273 40 74 chr20 59735638 59735707 -12418175 - L2 LINE L2 -412 2901 2831 316 298 16 0 chr20 59735976 59736097 -12417785 - L2 LINE L2 -2 3270 3148 714 202 58 63 chr20 59736098 59736321 -12417561 - MER58A DNA MER1_type -2 222 1 438 297 193 10 chr20 59736499 59736903 -12416979 - L2 LINE L2 -339 2975 2498 2434 259 68 53 chr20 59786904 59788341 -12365541 - L1MCa LINE L1 -1721 4705 3247 2181 99 3 13 chr20 59788343 59788657 -12365225 - AluSp SINE Alu -2 311 1 623 203 46 13 chr20 59788666 59788819 -12365063 - L1ME1 LINE L1 -2 6164 6007 309 222 0 0 chr20 59788824 59788887 -12364995 - L1MEd LINE L1 -5115 1090 1028 366 227 34 0 chr20 59788953 59789041 -12364841 - L1MEd LINE L1 -6269 127 37 2086 248 100 29 chr20 59789041 59789589 -12364293 - L1MCa LINE L1 -3171 3255 2631 2186 94 3 3 chr20 59789589 59789887 -12363995 + AluSp SINE Alu 3 300 -13 2086 248 100 29 chr20 59789887 59790308 -12363574 - L1MCa LINE L1 -3795 2631 2241 1122 174 5 19 chr20 59790320 59790527 -12363355 + AluJb SINE Alu 85 288 -24 426 79 0 0 chr20 59790533 59790596 -12363286 + (CA)n Simple_repeat Simple_repeat 2 64 0 240 35 0 0 chr20 59790629 59790658 -12363224 + (CA)n Simple_repeat Simple_repeat 2 30 0 2324 126 32 32 chr20 59790793 59791016 -12362866 + Tigger2a DNA MER2_type 2 227 -2481 455 0 0 0 chr20 59791016 59791070 -12362812 - L1PA3 LINE L1 -3 6152 6099 2324 126 32 32 chr20 59791070 59791226 -12362656 + Tigger2a DNA MER2_type 226 381 -53 756 156 8 23 chr20 59791227 59791355 -12362527 + FLAM_C SINE Alu 2 127 -16 481 176 0 0 chr20 59791378 59791452 -12362430 + Tigger2a DNA MER2_type 361 434 0 1050 278 105 24 chr20 59791563 59792420 -12361462 - L1MCa LINE L1 -4576 2031 899 668 329 32 42 chr20 59792570 59792950 -12360932 - LTR16C LTR ERVL -1 490 115 333 309 59 22 chr20 59793445 59793581 -12360301 - L1MCa LINE L1 -5924 492 352 210 255 85 0 chr20 59793740 59793787 -12360095 + L2 LINE L2 3219 3269 -3 1261 233 137 9 chr20 59794165 59794625 -12359257 - MER113 DNA MER1_type? -2 519 1 519 45 0 0 chr20 59795065 59795131 -12358751 + (TC)n Simple_repeat Simple_repeat 2 67 0 1797 147 3 3 chr20 59795148 59795434 -12358448 - AluSx SINE Alu -26 286 1 909 234 98 49 chr20 59795964 59796243 -12357639 + MER102b DNA MER1_type 2 299 -1129 468 298 0 9 chr20 59796243 59796357 -12357525 - MER81 DNA DNA 0 114 2 909 234 98 49 chr20 59796357 59796384 -12357498 + MER102b DNA MER1_type 299 323 -18 681 226 19 7 chr20 59796415 59796570 -12357312 - MIR SINE MIR -34 228 72 1074 268 109 50 chr20 59796697 59797275 -12356607 + MLT1L LTR MaLR 2 613 -2 643 315 15 0 chr20 59797653 59797853 -12356029 + MIR SINE MIR 59 261 -1 298 320 48 61 chr20 59797891 59798038 -12355844 - MIR SINE MIR -97 165 21 23 0 0 0 chr20 59798616 59798639 -12355243 + AT_rich Low_complexity Low_complexity 1 23 0 636 248 30 61 chr20 59798697 59798913 -12354969 + MER58A DNA MER1_type 2 212 -2208 2250 90 0 0 chr20 59798913 59799212 -12354670 + AluSx SINE Alu 13 311 -1 636 248 30 61 chr20 59799212 59799225 -12354657 + MER58A DNA MER1_type 212 224 0 378 238 20 30 chr20 59799482 59799583 -12354299 + MIR SINE MIR 21 120 -142 1354 176 72 15 chr20 59799689 59799951 -12353931 + AluJo SINE Alu 1 277 -35 2589 55 0 0 chr20 59799960 59800271 -12353611 - AluY SINE Alu 0 311 1 181 116 23 23 chr20 59800285 59800328 -12353554 + GA-rich Low_complexity Low_complexity 3 45 0 219 36 0 0 chr20 59801021 59801049 -12352833 + (T)n Simple_repeat Simple_repeat 1 28 0 2267 76 0 0 chr20 59801058 59801349 -12352533 + AluSc SINE Alu 1 291 -18 1616 174 0 21 chr20 59801356 59801644 -12352238 - AluJo SINE Alu -30 282 1 532 205 53 46 chr20 59801647 59801798 -12352084 - MER113 DNA MER1_type? -40 481 330 1108 214 33 98 chr20 59801861 59802220 -12351662 - MER58B DNA MER1_type 0 341 6 576 294 101 24 chr20 59802231 59802468 -12351414 + MIR SINE MIR 4 256 -6 594 246 71 14 chr20 59802469 59802680 -12351202 - MER113 DNA MER1_type? -297 224 2 1852 131 3 14 chr20 59802765 59803056 -12350826 + AluSq SINE Alu 3 290 -23 41 0 0 0 chr20 59803056 59803097 -12350785 + AT_rich Low_complexity Low_complexity 1 41 0 181 256 8 101 chr20 59803300 59803314 -12350568 + L2 LINE L2 2401 2415 -899 4728 171 29 15 chr20 59803314 59804221 -12349661 + MER49 LTR ERV1 5 923 0 181 256 8 101 chr20 59804221 59804335 -12349547 + L2 LINE L2 2415 2517 -797 204 77 31 77 chr20 59804459 59804524 -12349358 + (TTA)n Simple_repeat Simple_repeat 3 64 0 * 217 241 0 62 chr20 59804488 59804535 -12349347 + (TATAA)n Simple_repeat Simple_repeat 3 51 -87 1962 135 10 3 chr20 59804535 59804831 -12349051 - AluSx SINE Alu -14 298 1 217 241 0 62 chr20 59804831 59804928 -12348954 + (TATAA)n Simple_repeat Simple_repeat 51 138 0 33 43 0 0 chr20 59805033 59805080 -12348802 + AT_rich Low_complexity Low_complexity 1 47 0 1997 112 3 14 chr20 59805096 59805392 -12348490 - AluSx SINE Alu -19 293 1 183 179 0 125 chr20 59806094 59806150 -12347732 + L2 LINE L2 3265 3313 0 187 331 90 15 chr20 59806278 59806411 -12347471 - MIR3 SINE MIR -64 144 2 230 345 163 20 chr20 59806474 59806677 -12347205 - L3 LINE CR1 -69 1508 1277 232 71 0 0 chr20 59806755 59806783 -12347099 - LTR6A LTR ERV1 -464 100 73 570 319 76 17 chr20 59807823 59808061 -12345821 - MIR SINE MIR -4 258 7 676 296 147 9 chr20 59808205 59808667 -12345215 - L1ME4a LINE L1 -135 5986 5461 448 238 58 0 chr20 59809550 59809680 -12344202 + MIR SINE MIR 45 192 -62 327 188 16 0 chr20 59810168 59810232 -12343650 + MER89 LTR ERV1 25 89 -470 * 339 234 0 0 chr20 59810206 59810270 -12343612 + MER89 LTR ERV1 198 261 -298 486 250 23 23 chr20 59810542 59810674 -12343208 - MER5A DNA MER1_type -9 180 49 326 293 152 49 chr20 59810686 59810850 -12343032 + MER5A DNA MER1_type 9 189 0 716 293 10 0 chr20 59810903 59811108 -12342774 - MIR SINE MIR -21 241 35 1215 142 90 9 chr20 59811474 59811707 -12342175 - Tigger2 DNA MER2_type -200 2518 2267 254 135 0 0 chr20 59811694 59811731 -12342151 + MER8 DNA MER2_type 174 210 -29 * 252 194 155 29 chr20 59812536 59812639 -12341243 + L1ME4a LINE L1 5689 5804 -317 2388 170 41 11 chr20 59812680 59813116 -12340766 - Tigger2 DNA MER2_type 0 2718 2270 416 149 0 0 chr20 59813104 59813171 -12340711 - Tigger2 DNA MER2_type -2651 67 1 * 248 217 154 83 chr20 59813173 59813265 -12340617 + L1ME4a LINE L1 5864 5948 -173 2154 107 3 0 chr20 59813265 59813563 -12340319 - AluSp SINE Alu -14 299 1 248 217 154 83 chr20 59813563 59813710 -12340172 + L1ME4a LINE L1 5948 6120 -1 434 293 112 52 chr20 59813780 59814012 -12339870 - MIR SINE MIR 0 262 17 480 185 207 7 chr20 59814045 59814180 -12339702 - MER53 DNA DNA 0 189 28 2002 125 4 0 chr20 59814310 59814633 -12339249 - AluSp SINE Alu 0 324 1 671 194 36 48 chr20 59815032 59815197 -12338685 - MER5B DNA MER1_type -15 163 1 269 245 61 41 chr20 59815258 59815356 -12338526 + MIR SINE MIR 129 228 -34 694 288 30 5 chr20 59815423 59815621 -12338261 - MIR SINE MIR -59 203 1 445 211 125 59 chr20 59815811 59815963 -12337919 - L2 LINE L2 0 3313 3152 450 246 113 30 chr20 59816003 59816206 -12337676 - L2 LINE L2 -541 2773 2554 277 256 171 39 chr20 59817402 59817531 -12336351 - MIR SINE MIR -83 125 21 418 263 17 25 chr20 59817641 59817759 -12336123 + MIR SINE MIR 8 124 -138 554 268 48 22 chr20 59817848 59818028 -12335854 + MIR SINE MIR 8 190 -62 908 208 85 30 chr20 59818205 59818441 -12335441 + MIR SINE MIR 14 262 0 186 71 0 0 chr20 59819353 59819381 -12334501 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 355 264 46 0 chr20 59819381 59819468 -12334414 - L2 LINE L2 -13 3300 3210 609 225 35 12 chr20 59819468 59819637 -12334245 + MER45A DNA AcHobo 3 175 -3 522 265 118 41 chr20 59819638 59819978 -12333904 - L2 LINE L2 -93 3220 2855 942 221 124 30 chr20 59820497 59820827 -12333055 + MER113 DNA MER1_type? 117 477 -44 321 297 83 51 chr20 59820868 59821144 -12332738 - LTR67 LTR ERVL -29 528 244 1253 165 5 5 chr20 59821160 59821384 -12332498 - AluJb SINE Alu -2 310 87 668 279 13 58 chr20 59821388 59821614 -12332268 - LTR67 LTR ERVL -339 218 3 2541 203 33 16 chr20 59821628 59822175 -12331707 + MER68 LTR ERV1 1 556 -6 268 355 22 14 chr20 59822345 59822483 -12331399 - MIR3 SINE MIR -68 140 2 1990 121 7 19 chr20 59822574 59822745 -12331137 - AluJb SINE Alu -9 303 131 208 0 62 0 chr20 59822745 59822777 -12331105 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2124 102 0 3 chr20 59822777 59823061 -12330821 - AluSx SINE Alu -29 283 1 1990 121 7 19 chr20 59823061 59823195 -12330687 - AluJb SINE Alu -179 133 1 334 205 54 127 chr20 59823341 59823408 -12330474 - MER5A DNA MER1_type -2 187 117 2243 73 0 0 chr20 59823408 59823753 -12330129 + AluSx SINE Alu 1 345 0 334 205 54 127 chr20 59823753 59823850 -12330032 - MER5A DNA MER1_type -72 117 34 626 149 64 128 chr20 59824141 59824329 -12329553 + MLT1D LTR MaLR 18 193 -312 803 164 60 8 chr20 59824332 59824466 -12329416 + AluJo SINE Alu 2 142 -170 2076 116 3 10 chr20 59824466 59824768 -12329114 + AluSq SINE Alu 1 300 -13 1757 151 30 7 chr20 59824770 59825069 -12328813 + AluJo SINE Alu 1 306 -6 408 191 0 0 chr20 59825069 59825153 -12328729 + GA-rich Low_complexity Low_complexity 3 86 0 573 248 114 45 chr20 59825193 59825395 -12328487 + MLT1D LTR MaLR 290 505 0 317 276 251 22 chr20 59825447 59825762 -12328120 + L2 LINE L2 2922 3308 -5 340 271 56 0 chr20 59825919 59826026 -12327856 + MIR SINE MIR 34 146 -62 633 288 22 11 chr20 59826056 59826240 -12327642 - MIR SINE MIR -13 249 64 1896 101 21 21 chr20 59826431 59826719 -12327163 + AluSx SINE Alu 1 288 -24 183 294 71 35 chr20 59827464 59827549 -12326333 + MIR SINE MIR 107 194 -68 707 129 57 0 chr20 59827773 59827897 -12325985 - L1MA2 LINE L1 0 6304 6174 357 291 112 81 chr20 59827953 59828238 -12325644 - L2 LINE L2 -4 3309 3016 21 0 0 0 chr20 59828399 59828420 -12325462 + AT_rich Low_complexity Low_complexity 1 21 0 1630 279 13 21 chr20 59828782 59829256 -12324626 - MLT1K LTR MaLR -108 480 11 713 242 15 14 chr20 59829821 59830033 -12323849 - MIR SINE MIR -37 225 13 324 48 0 0 chr20 59830045 59830087 -12323795 + (CA)n Simple_repeat Simple_repeat 1 42 0 237 298 48 19 chr20 59830225 59830329 -12323553 + MIR SINE MIR 48 154 -108 877 204 23 41 chr20 59831068 59831288 -12322594 - MER20 DNA MER1_type -3 216 1 1885 148 91 26 chr20 59831554 59831684 -12322198 - MLT1A1 LTR MaLR -4 361 241 2368 106 36 28 chr20 59831684 59832044 -12321838 + THE1B LTR MaLR 1 363 -1 1885 148 91 26 chr20 59832044 59832252 -12321630 - MLT1A1 LTR MaLR -124 241 1 24 0 0 0 chr20 59832355 59832379 -12321503 + AT_rich Low_complexity Low_complexity 1 24 0 763 118 7 29 chr20 59832458 59832594 -12321288 - L1PA6 LINE L1 -3 6151 6019 192 260 60 0 chr20 59833047 59833097 -12320785 + MIR SINE MIR 88 140 -68 401 178 14 0 chr20 59833196 59833269 -12320613 + MER103 DNA DNA 13 86 -80 644 275 123 30 chr20 59834271 59834671 -12319211 + L1ME4a LINE L1 5565 6001 -120 2678 197 84 5 chr20 59834888 59835468 -12318414 - MLT1E2 LTR MaLR 0 626 1 2027 130 0 3 chr20 59835781 59836073 -12317809 + AluSx SINE Alu 1 291 -21 329 252 19 116 chr20 59836129 59836309 -12317573 + MER5A DNA MER1_type 8 180 -9 312 288 114 8 chr20 59836638 59836770 -12317112 + MIR SINE MIR 28 173 -89 245 196 59 0 chr20 59836804 59836855 -12317027 - MLT1J LTR MaLR 0 511 458 215 147 441 15 chr20 59836985 59837053 -12316829 - MER5A DNA MER1_type -84 105 9 2096 84 3 40 chr20 59837057 59837354 -12316528 - AluSg SINE Alu -24 286 1 2100 135 26 32 chr20 59839150 59839527 -12314355 + THE1C LTR MaLR 1 375 0 1708 145 38 24 chr20 59839905 59840194 -12313688 - AluJo SINE Alu -19 293 1 1669 173 30 77 chr20 59840359 59840764 -12313118 - MER58D DNA MER1_type 0 386 1 251 279 0 47 chr20 59841019 59841105 -12312777 + MIR SINE MIR 69 150 -112 1563 116 4 17 chr20 59841191 59841287 -12312595 - MER30 DNA MER1_type 0 230 134 2340 113 3 0 chr20 59841287 59841596 -12312286 + AluSg SINE Alu 1 310 0 1563 116 4 17 chr20 59841596 59841732 -12312150 - MER30 DNA MER1_type -96 134 1 348 261 109 14 chr20 59841990 59842128 -12311754 + L1ME4a LINE L1 5971 6121 0 195 304 54 36 chr20 59842449 59842561 -12311321 + MIR SINE MIR 35 148 -60 1437 201 14 7 chr20 59842642 59842926 -12310956 + MER82 DNA MER2_type 1 286 -367 1105 213 42 4 chr20 59842986 59843225 -12310657 + MER82 DNA MER2_type 406 653 0 423 263 186 16 chr20 59843226 59843538 -12310344 - MER113 DNA MER1_type? -82 439 75 328 254 52 87 chr20 59843910 59844083 -12309799 - MER5A DNA MER1_type -21 168 2 283 300 30 10 chr20 59844264 59844364 -12309518 - MIR SINE MIR -144 118 17 348 262 131 36 chr20 59844472 59844640 -12309242 - MIR SINE MIR -16 246 63 255 236 97 0 chr20 59844749 59844821 -12309061 - MLT1G LTR MaLR 0 590 512 2374 134 25 6 chr20 59844822 59845179 -12308703 + THE1B LTR MaLR 1 364 0 505 219 22 22 chr20 59845318 59845455 -12308427 - MLT1H LTR MaLR -315 234 98 237 264 82 36 chr20 59845508 59845618 -12308264 + MLT1K LTR MaLR 27 141 -447 654 266 75 18 chr20 59845674 59845900 -12307982 + MLT1K LTR MaLR 309 547 -41 300 191 15 153 chr20 59846016 59846147 -12307735 - MER102b DNA MER1_type -30 311 199 918 197 12 63 chr20 59847003 59847257 -12306625 - MER96B DNA MER1_type? -176 241 1 424 247 123 25 chr20 59847275 59847437 -12306445 + MIR SINE MIR 48 225 -37 307 237 32 129 chr20 59847515 59847701 -12306181 - MIR SINE MIR -35 227 60 476 239 94 44 chr20 59848168 59848327 -12305555 + MLT1K LTR MaLR 13 179 -409 884 260 25 29 chr20 59848369 59848646 -12305236 + MLT1K LTR MaLR 305 580 -8 225 315 108 27 chr20 59848655 59848766 -12305116 + L2 LINE L2 3142 3261 -11 1166 247 101 77 chr20 59848767 59849350 -12304532 + MLT1L LTR MaLR 1 597 -18 180 0 0 0 chr20 59849358 59849378 -12304504 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 1744 149 3 66 chr20 59849483 59849785 -12304097 - AluJb SINE Alu -25 287 5 1991 140 0 4 chr20 59850201 59850480 -12303402 + AluSx SINE Alu 11 288 -24 2584 182 11 61 chr20 59850500 59850876 -12303006 - MLT2B1 LTR ERVL -2 518 176 2117 123 0 3 chr20 59850876 59851161 -12302721 + AluSx SINE Alu 1 284 -28 2584 182 11 61 chr20 59851161 59851329 -12302553 - MLT2B1 LTR ERVL -344 176 1 1169 208 30 4 chr20 59851684 59851949 -12301933 + L1MD3 LINE L1 7567 7838 -157 424 207 23 0 chr20 59851949 59852036 -12301846 - MLT1D LTR MaLR 0 505 417 1755 137 178 8 chr20 59852038 59852404 -12301478 + MSTA LTR MaLR 1 428 0 * 1982 182 7 43 chr20 59852404 59852823 -12301059 - MLT1D LTR MaLR -94 411 8 755 180 22 0 chr20 59852830 59852969 -12300913 + L1MD3 LINE L1 7834 7975 -20 341 292 87 49 chr20 59852993 59853178 -12300704 + MIR SINE MIR 71 262 0 229 317 30 30 chr20 59853557 59853658 -12300224 + L2 LINE L2 2650 2750 -564 2331 97 0 10 chr20 59853658 59853968 -12299914 + AluSc SINE Alu 1 307 -2 338 289 72 69 chr20 59854047 59854324 -12299558 + L2 LINE L2 2813 3090 -182 486 305 48 20 chr20 59854509 59854700 -12299182 - MIR SINE MIR -24 238 32 975 313 52 47 chr20 59855209 59855675 -12298207 - MLT1K LTR MaLR -111 477 10 399 231 112 37 chr20 59856444 59856578 -12297304 + MIR3 SINE MIR 3 146 -62 621 264 191 23 chr20 59856861 59857206 -12296676 + L2 LINE L2 2897 3299 -14 258 227 61 0 chr20 59857206 59857272 -12296610 + GA-rich Low_complexity Low_complexity 1 70 0 1018 279 58 16 chr20 59857513 59857978 -12295904 + MLT1K LTR MaLR 10 529 -59 553 313 127 25 chr20 59859018 59859570 -12294312 + L2 LINE L2 2214 2821 -493 1413 148 0 0 chr20 59859613 59859829 -12294053 - MER58A DNA MER1_type -8 216 1 389 298 78 0 chr20 59859840 59859981 -12293901 + MIR SINE MIR 92 243 -19 223 261 154 0 chr20 59860135 59860200 -12293682 - L2 LINE L2 -14 3258 3184 226 321 24 12 chr20 59860275 59860359 -12293523 - L2 LINE L2 -14 3258 3174 3907 123 25 0 chr20 59860614 59861225 -12292657 - L1PA13 LINE L1 -37 6126 5501 587 257 80 29 chr20 59861513 59861951 -12291931 + MLT1J LTR MaLR 4 508 -3 208 370 0 12 chr20 59862031 59862112 -12291770 - L2 LINE L2 -5 3267 3188 387 60 0 0 chr20 59862181 59862231 -12291651 + (CA)n Simple_repeat Simple_repeat 1 50 0 469 246 95 8 chr20 59862233 59862359 -12291523 - MIR SINE MIR -92 170 34 378 339 27 27 chr20 59862451 59862637 -12291245 - MIR SINE MIR -1 261 76 2220 113 0 3 chr20 59863052 59863345 -12290537 + AluSq SINE Alu 1 292 -21 266 225 0 38 chr20 59863347 59863427 -12290455 + MLT1K LTR MaLR 155 231 -357 243 301 145 21 chr20 59863475 59863661 -12290221 + MLT1K LTR MaLR 319 527 -61 302 286 66 0 chr20 59864053 59864144 -12289738 - L2 LINE L2 -8 3264 3168 257 310 35 21 chr20 59864193 59864335 -12289547 - MLT1K LTR MaLR -9 579 436 352 297 149 7 chr20 59864763 59864911 -12288971 - MIR SINE MIR -8 254 86 2533 48 16 3 chr20 59864923 59865232 -12288650 - AluSp SINE Alu 0 313 1 687 256 63 17 chr20 59866319 59866565 -12287317 + MIR SINE MIR 1 260 -2 314 319 90 11 chr20 59866601 59866789 -12287093 + MIR SINE MIR 1 203 -59 2244 210 60 4 chr20 59866818 59867303 -12286579 + MER68 LTR ERV1 50 561 -1 180 97 0 0 chr20 59868128 59868159 -12285723 + (TC)n Simple_repeat Simple_repeat 2 32 0 468 0 0 0 chr20 59868159 59868211 -12285671 + (CA)n Simple_repeat Simple_repeat 1 52 0 2573 89 14 27 chr20 59868216 59868585 -12285297 + THE1B LTR MaLR 1 364 0 1517 236 47 28 chr20 59869225 59869691 -12284191 + L1ME3A LINE L1 5337 5811 -359 581 262 30 18 chr20 59869799 59869963 -12283919 + MER58B DNA MER1_type 176 341 0 920 283 36 36 chr20 59869971 59870332 -12283550 + L1ME3A LINE L1 5810 6170 0 3819 185 30 23 chr20 59870458 59870472 -12283410 + LTR39 LTR ERV1 1 13 -770 3805 71 23 2 chr20 59870472 59870952 -12282930 + LTR2B LTR ERV1 1 490 0 3819 185 30 23 chr20 59870952 59871715 -12282167 + LTR39 LTR ERV1 13 783 0 259 216 40 40 chr20 59872082 59872155 -12281727 - MLT1K LTR MaLR -40 548 476 2594 154 62 39 chr20 59872155 59872416 -12281466 - LTR26B LTR ERV1 0 531 278 3317 156 42 72 chr20 59872416 59873126 -12280756 - LTR8 LTR ERV1 0 691 3 2594 154 62 39 chr20 59873126 59873383 -12280499 - LTR26B LTR ERV1 -253 278 1 559 228 118 99 chr20 59873386 59873750 -12280132 - MLT1K LTR MaLR -109 479 109 1750 229 41 28 chr20 59873753 59874190 -12279692 + MER21B LTR ERV1 46 488 -375 1931 229 94 46 chr20 59874191 59874463 -12279419 - MER50 LTR ERV1 -1 733 475 2225 104 3 10 chr20 59874463 59874760 -12279122 - AluY SINE Alu -16 295 1 1931 229 94 46 chr20 59874760 59875178 -12278704 - MER50 LTR ERV1 -259 475 10 1730 163 58 16 chr20 59875184 59875547 -12278335 + MER21B LTR ERV1 485 862 -1 3550 149 55 35 chr20 59875609 59876322 -12277560 + LTR8A LTR ERV1 1 727 0 327 331 38 8 chr20 59876781 59876914 -12276968 + MIR3 SINE MIR 5 141 -67 432 174 70 0 chr20 59877710 59877796 -12276086 + LTR50 LTR ERVL 14 105 -690 379 298 99 0 chr20 59877891 59878032 -12275850 + MIR SINE MIR 84 238 -24 312 351 114 30 chr20 59878238 59878537 -12275345 + L2 LINE L2 2946 3269 -3 348 346 22 9 chr20 59878761 59878915 -12274967 + MER5A DNA MER1_type 25 189 0 181 214 31 153 chr20 59879282 59879380 -12274502 + MIR SINE MIR 99 184 -78 1913 117 166 3 chr20 59879652 59879977 -12273905 - MER83B LTR ERV1 0 378 1 1822 144 75 3 chr20 59880760 59881080 -12272802 - MER61A LTR ERV1 0 343 1 216 277 60 12 chr20 59881337 59881420 -12272462 + MIR SINE MIR 60 146 -116 1587 197 0 13 chr20 59881470 59881769 -12272113 + AluJo SINE Alu 12 306 -6 1987 106 0 0 chr20 59882004 59882258 -12271624 + AluSg SINE Alu 50 303 -7 757 300 16 9 chr20 59882686 59882980 -12270902 + L1ME LINE L1 5474 5766 -404 552 213 82 63 chr20 59883027 59883234 -12270648 + MER20 DNA MER1_type 6 216 -3 263 272 37 0 chr20 59883520 59883601 -12270281 + MIR SINE MIR 108 191 -71 180 77 0 0 chr20 59883803 59883829 -12270053 + (GA)n Simple_repeat Simple_repeat 2 27 0 244 205 217 12 chr20 59884246 59884329 -12269553 + MIR SINE MIR 46 145 -117 402 298 168 11 chr20 59884492 59884683 -12269199 - MIR SINE MIR -34 228 8 1550 150 0 129 chr20 59884922 59885263 -12268619 - AluJo SINE Alu 0 312 16 2175 102 35 0 chr20 59885297 59885581 -12268301 + AluSx SINE Alu 1 294 -18 1437 171 14 138 chr20 59885761 59886187 -12267695 - MLT1A2 LTR MaLR -1 373 1 519 135 42 10 chr20 59886613 59886709 -12267173 - MER53 DNA DNA 0 189 91 1669 230 19 19 chr20 59886786 59887151 -12266731 - MLT1A1 LTR MaLR 0 365 1 421 346 97 0 chr20 59888136 59888321 -12265561 + MIR SINE MIR 46 248 -14 2615 153 24 0 chr20 59888485 59888903 -12264979 + MSTA LTR MaLR 1 428 0 226 331 16 57 chr20 59889082 59889206 -12264676 + L1ME LINE L1 864 982 -5949 265 270 175 17 chr20 59889700 59889960 -12263922 + L1ME LINE L1 1279 1694 -4937 250 211 17 116 chr20 59889937 59890067 -12263815 + L1 LINE L1 4268 4384 -2557 * 207 0 0 0 chr20 59890528 59890551 -12263331 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 832 306 87 58 chr20 59890583 59891044 -12262838 - L2 LINE L2 -1 3312 2866 2342 83 0 3 chr20 59891044 59891346 -12262536 + AluSx SINE Alu 1 301 -11 832 306 87 58 chr20 59891346 59891796 -12262086 - L2 LINE L2 -447 2866 2380 806 282 40 9 chr20 59892511 59892738 -12261144 + MIR SINE MIR 3 236 -26 731 189 18 105 chr20 59892822 59893050 -12260832 + MER3 DNA MER1_type 2 209 0 566 242 8 8 chr20 59893461 59893593 -12260289 + MIR SINE MIR 5 136 -126 5036 83 6 0 chr20 59893699 59894352 -12259530 + PABL_A LTR ERV1 3 659 -1 447 271 127 17 chr20 59895366 59895602 -12258280 + L2 LINE L2 2572 2833 -481 183 42 0 0 chr20 59895963 59895987 -12257895 + (TAA)n Simple_repeat Simple_repeat 1 24 0 255 318 65 30 chr20 59896226 59896504 -12257378 + L2 LINE L2 2721 3010 -262 218 205 55 118 chr20 59896498 59896625 -12257257 + L2 LINE L2 2626 2744 -570 * 1760 119 96 3 chr20 59896625 59896918 -12256964 + MER4C LTR ERV1 142 461 -4 630 153 80 0 chr20 59896917 59897067 -12256815 + Charlie5 DNA MER1_type 2384 2545 -67 * 2117 86 33 0 chr20 59897067 59897371 -12256511 - L1P LINE L1 -773 5373 5060 3319 89 22 0 chr20 59897371 59897821 -12256061 + L1PA8 LINE L1 5712 6171 -1 314 170 70 110 chr20 59897821 59897921 -12255961 + Charlie5 DNA MER1_type 2527 2622 0 184 264 35 104 chr20 59897939 59898083 -12255799 - L2 LINE L2 -129 3184 3051 2028 166 26 6 chr20 59898083 59898432 -12255450 + MLT1B LTR MaLR 1 356 -34 433 254 161 9 chr20 59898449 59898666 -12255216 - L2 LINE L2 -256 3057 2808 2330 235 64 76 chr20 59899317 59899698 -12254184 + L1MC4a LINE L1 5954 6338 -1470 2190 46 0 0 chr20 59899698 59899958 -12253924 + AluY SINE Alu 36 295 -16 2330 235 64 76 chr20 59899958 59900495 -12253387 + L1MC4a LINE L1 6338 6861 -947 251 250 15 0 chr20 59901213 59901281 -12252601 + MIR SINE MIR 65 133 -129 470 319 75 35 chr20 59901566 59901792 -12252090 - MIR SINE MIR -8 254 20 1039 215 128 68 chr20 59901798 59902267 -12251615 + MLT1D LTR MaLR 3 499 -6 2086 115 3 0 chr20 59902471 59902766 -12251116 - AluSg SINE Alu -14 296 1 2442 136 13 10 chr20 59902989 59903387 -12250495 + L1PB3 LINE L1 5707 6105 -49 384 169 78 0 chr20 59903414 59903580 -12250302 + (TA)n Simple_repeat Simple_repeat 2 180 0 348 213 30 30 chr20 59903603 59903767 -12250115 + (TATAA)n Simple_repeat Simple_repeat 5 168 0 232 125 83 0 chr20 59903798 59903894 -12249988 + (TA)n Simple_repeat Simple_repeat 1 104 0 308 306 13 79 chr20 59903925 59904154 -12249728 + L1ME4a LINE L1 5771 5984 -137 290 314 66 7 chr20 59904198 59904335 -12249547 - Charlie8 DNA MER1_type -2243 174 30 2224 140 62 82 chr20 59904415 59904879 -12249003 - LTR32 LTR ERVL 0 471 17 322 295 21 0 chr20 59905576 59905671 -12248211 - MIR SINE MIR 0 262 166 247 246 31 15 chr20 59905753 59905802 -12248080 + L2 LINE L2 3207 3259 -13 3865 128 12 44 chr20 59905802 59905945 -12247937 + MER51A LTR ERV1 1 147 -487 1725 111 53 4 chr20 59905945 59906207 -12247675 - AluSg SINE Alu -12 298 24 3865 128 12 44 chr20 59906207 59906718 -12247164 + MER51A LTR ERV1 147 634 0 247 246 31 15 chr20 59906718 59906733 -12247149 + L2 LINE L2 3259 3272 0 2180 97 13 0 chr20 59906988 59907296 -12246586 + AluSx SINE Alu 1 312 0 1213 214 56 65 chr20 59907436 59907742 -12246140 - MLT1C LTR MaLR -37 430 128 2353 97 80 9 chr20 59907742 59908081 -12245801 - THE1B LTR MaLR -1 363 1 1213 214 56 65 chr20 59908081 59908203 -12245679 - MLT1C LTR MaLR -339 128 6 771 269 78 0 chr20 59909534 59909727 -12244155 - MIR SINE MIR -2 260 53 616 267 129 12 chr20 59909728 59909968 -12243914 + MLT1G1 LTR MaLR 328 595 0 1008 253 125 44 chr20 59910348 59911141 -12242741 + L2 LINE L2 2462 3311 -2 812 153 68 23 chr20 59911327 59911504 -12242378 - MER53 DNA DNA -3 186 2 459 309 14 48 chr20 59912185 59912392 -12241490 + L2 LINE L2 3113 3312 -1 507 264 119 48 chr20 59912392 59912661 -12241221 + MLT1J LTR MaLR 183 470 -41 27 0 0 0 chr20 59913638 59913665 -12240217 + AT_rich Low_complexity Low_complexity 1 27 0 327 264 47 0 chr20 59913949 59914055 -12239827 + Charlie8 DNA MER1_type 83 193 -2224 2655 90 3 0 chr20 59914141 59914484 -12239398 - HERVL LTR ERVL -606 5048 4705 3141 150 4 12 chr20 59914488 59914982 -12238900 + MSTA-int LTR MaLR 552 1041 -539 938 90 7 28 chr20 59915012 59915157 -12238725 + MSTA-int LTR MaLR 1439 1580 0 2019 171 94 3 chr20 59915157 59915549 -12238333 + MSTA LTR MaLR 1 428 0 322 283 164 40 chr20 59915549 59915775 -12238107 + Charlie8 DNA MER1_type 180 433 -1984 397 268 108 54 chr20 59915955 59916294 -12237588 + MLT1H LTR MaLR 52 383 -26 687 341 179 13 chr20 59916875 59917405 -12236477 + L2 LINE L2 2092 2709 -605 1314 255 40 28 chr20 59917484 59917911 -12235971 + MER20B DNA MER1_type 161 592 -191 775 71 0 0 chr20 59917920 59918018 -12235864 + AluSq SINE Alu 2 99 -213 1328 108 0 5 chr20 59918068 59918253 -12235629 + AluSq SINE Alu 104 287 -26 448 266 29 40 chr20 59918279 59918452 -12235430 + MER20B DNA MER1_type 610 780 -3 1086 179 16 0 chr20 59919296 59919480 -12234402 + MER5A DNA MER1_type 1 187 -2 857 206 60 49 chr20 59919595 59919862 -12234020 + LTR37B LTR ERV1 197 466 -2 781 292 36 8 chr20 59919946 59920196 -12233686 - MIR SINE MIR 0 262 6 356 299 63 8 chr20 59920248 59920375 -12233507 - MER20B DNA MER1_type -594 189 56 243 277 75 21 chr20 59920977 59921071 -12232811 + L1ME3 LINE L1 5508 5606 -564 1629 158 0 18 chr20 59921072 59921350 -12232532 + AluJb SINE Alu 1 273 -39 300 233 56 67 chr20 59921351 59921441 -12232441 - L1MC4 LINE L1 -1340 6702 6614 192 40 0 0 chr20 59921459 59921484 -12232398 + (GA)n Simple_repeat Simple_repeat 2 26 0 2849 68 16 8 chr20 59921484 59921853 -12232029 - THE1C LTR MaLR -1 374 3 188 133 44 0 chr20 59921903 59921948 -12231934 + GA-rich Low_complexity Low_complexity 3 49 0 1698 208 104 30 chr20 59921948 59922447 -12231435 + L1ME3 LINE L1 5595 6130 -32 183 279 0 0 chr20 59922468 59922511 -12231371 + MER5B DNA MER1_type 130 172 -6 400 272 22 4 chr20 59923026 59923170 -12230712 - MER5A DNA MER1_type 0 189 6 522 228 44 9 chr20 59923191 59923305 -12230577 - MIR SINE MIR -57 205 88 4242 233 26 48 chr20 59924287 59925468 -12228414 + L1M4 LINE L1 2304 3451 -2695 2281 100 0 0 chr20 59925468 59925777 -12228105 + AluSc SINE Alu 1 309 0 4242 233 26 48 chr20 59925777 59926028 -12227854 + L1M4 LINE L1 3451 3706 -2440 341 294 11 11 chr20 59926098 59926190 -12227692 + LTR67 LTR ERVL 114 205 -352 1678 156 3 44 chr20 59926195 59926516 -12227366 + AluJb SINE Alu 1 308 -4 571 247 65 0 chr20 59926602 59926756 -12227126 + LTR67 LTR ERVL 392 555 -2 621 306 83 12 chr20 59926858 59927100 -12226782 + MIR SINE MIR 2 260 -2 1173 219 55 30 chr20 59927271 59927596 -12226286 + L1ME2 LINE L1 5816 6149 -15 327 285 118 70 chr20 59927952 59928222 -12225660 - L2 LINE L2 -5 3267 2985 371 314 147 0 chr20 59928244 59928400 -12225482 - MIR SINE MIR -3 259 81 2021 143 0 3 chr20 59928460 59928768 -12225114 + AluSx SINE Alu 1 307 -5 704 333 6 0 chr20 59928813 59928996 -12224886 - MIR SINE MIR -77 185 2 214 313 12 24 chr20 59929038 59929121 -12224761 + MIR SINE MIR 161 242 -20 371 291 82 0 chr20 59929174 59929284 -12224598 - L2 LINE L2 -3 3269 3151 3404 217 41 17 chr20 59930354 59931203 -12222679 + L1ME1 LINE L1 5094 5969 -197 720 127 71 48 chr20 59931203 59931329 -12222553 + FLAM_C SINE Alu 1 129 -4 3404 217 41 17 chr20 59931329 59931527 -12222355 + L1ME1 LINE L1 5969 6161 -5 1848 101 97 0 chr20 59931581 59931849 -12222033 - AluSx SINE Alu -18 294 1 687 263 140 35 chr20 59932147 59932569 -12221313 + MLT1J LTR MaLR 42 507 -4 252 317 119 61 chr20 59932617 59932929 -12220953 - L2 LINE L2 -385 2929 2600 1012 203 15 20 chr20 59933929 59934126 -12219756 + MER58A DNA MER1_type 18 213 -11 320 278 47 84 chr20 59934147 59934265 -12219617 - MIR SINE MIR -9 253 143 1330 201 53 13 chr20 59934265 59934564 -12219318 - AluJo SINE Alu 0 312 2 320 278 47 84 chr20 59934564 59934636 -12219246 - MIR SINE MIR -119 143 70 1338 241 145 19 chr20 59934670 59935090 -12218792 + MER20B DNA MER1_type 1 473 -310 275 250 18 125 chr20 59935110 59935222 -12218660 - MER5A DNA MER1_type -83 106 7 502 329 7 0 chr20 59936130 59936282 -12217600 - MIR SINE MIR -54 208 56 633 307 65 9 chr20 59936310 59936541 -12217341 + MIR SINE MIR 13 256 -6 2531 156 22 5 chr20 59936542 59936953 -12216929 + MSTB LTR MaLR 2 419 -7 349 129 0 65 chr20 59937300 59937362 -12216520 + L1MB7 LINE L1 5631 5688 -495 1196 170 8 61 chr20 59937365 59937612 -12216270 + AluJb SINE Alu 30 263 -49 277 122 20 0 chr20 59937631 59937680 -12216202 + L1MB2 LINE L1 6122 6171 0 1373 161 62 14 chr20 59937691 59937983 -12215899 + L1MB7 LINE L1 5861 6166 -18 277 227 77 86 chr20 59938071 59938214 -12215668 + L2 LINE L2 2920 3057 -215 245 262 71 12 chr20 59938351 59938435 -12215447 + MIR SINE MIR 93 181 -81 2059 129 0 3 chr20 59938439 59938742 -12215140 + AluSx SINE Alu 1 302 -10 438 235 0 0 chr20 59938905 59938990 -12214892 - L2 LINE L2 -6 3307 3223 512 322 158 17 chr20 59939035 59939439 -12214443 - L2 LINE L2 -1 3312 2852 27 29 0 0 chr20 59940066 59940100 -12213782 + AT_rich Low_complexity Low_complexity 1 34 0 682 299 26 9 chr20 59940348 59940579 -12213303 + L2 LINE L2 1705 1939 -1375 927 124 0 29 chr20 59940624 59940761 -12213121 + FLAM_C SINE Alu 1 133 0 264 272 0 37 chr20 59940811 59940892 -12212990 - MIR SINE MIR -113 149 72 327 275 72 72 chr20 59941057 59941278 -12212604 + MIR SINE MIR 16 239 -23 513 325 34 30 chr20 59942053 59942313 -12211569 - MIR SINE MIR -1 261 2 287 235 137 0 chr20 59942321 59942423 -12211459 - MER102a DNA MER1_type -9 321 206 456 278 66 31 chr20 59942485 59942712 -12211170 + L1ME1 LINE L1 5929 6163 -3 461 291 92 31 chr20 59942872 59943068 -12210814 + MIR SINE MIR 42 249 -13 2043 145 0 0 chr20 59943418 59943715 -12210167 - AluSx SINE Alu -10 302 6 448 347 13 0 chr20 59943718 59943868 -12210014 + MIR SINE MIR 48 199 -63 2165 132 7 0 chr20 59944134 59944437 -12209445 + AluSg SINE Alu 1 305 -5 193 287 230 0 chr20 59945421 59945508 -12208374 + L2 LINE L2 2949 3055 -217 747 270 66 9 chr20 59945712 59945938 -12207944 + MIR SINE MIR 14 252 -10 231 226 19 0 chr20 59946399 59946452 -12207430 + MIR SINE MIR 15 68 -194 194 176 216 68 chr20 59946501 59946575 -12207307 + MIR SINE MIR 178 262 0 282 194 60 30 chr20 59946680 59946747 -12207135 + MER5A DNA MER1_type 110 189 0 2306 97 10 3 chr20 59947381 59947681 -12206201 + AluSq SINE Alu 12 313 0 21 0 0 0 chr20 59947774 59947795 -12206087 + AT_rich Low_complexity Low_complexity 1 21 0 215 339 0 65 chr20 59947797 59947921 -12205961 - L3b LINE CR1 -366 1217 1102 724 255 53 15 chr20 59948183 59948399 -12205483 - MIR SINE MIR -5 257 36 344 353 32 37 chr20 59948434 59948621 -12205261 - L3 LINE CR1 -770 807 622 652 270 87 20 chr20 59949444 59949546 -12204336 + L2 LINE L2 3042 3136 -177 1836 273 35 48 chr20 59949546 59950283 -12203599 - HsTC2c DNA MER2_type 0 729 2 652 270 87 20 chr20 59950283 59950432 -12203450 + L2 LINE L2 3136 3310 -3 304 241 99 7 chr20 59951137 59951278 -12202604 - L1ME4a LINE L1 -11 6110 5957 2132 127 13 0 chr20 59951727 59952026 -12201856 - AluSx SINE Alu -9 303 1 738 271 129 9 chr20 59952054 59952371 -12201511 - L2 LINE L2 -15 3298 2944 243 304 14 27 chr20 59952477 59952625 -12201257 - L1ME4a LINE L1 -2408 5400 5255 347 278 71 119 chr20 59952628 59952981 -12200901 - L1ME4a LINE L1 -895 5251 4916 392 343 35 0 chr20 59953011 59953154 -12200728 + MIR SINE MIR 28 175 -87 2670 218 121 6 chr20 59953163 59953857 -12200025 + MER45B DNA AcHobo 265 1038 -2 272 146 0 21 chr20 59953860 59953908 -12199974 + L2 LINE L2 3226 3272 0 2056 123 22 0 chr20 59954087 59954413 -12199469 - AluSx SINE Alu 0 332 1 778 174 0 0 chr20 59954688 59954809 -12199073 + AluJb SINE Alu 3 123 -189 185 237 17 0 chr20 59954810 59954869 -12199013 + (TA)n Simple_repeat Simple_repeat 1 60 0 227 266 0 43 chr20 59954876 59954970 -12198912 - L1MC4 LINE L1 -1339 6703 6614 252 214 0 0 chr20 59954972 59955028 -12198854 + (CA)n Simple_repeat Simple_repeat 2 57 0 1102 155 0 22 chr20 59955029 59955210 -12198672 + AluJb SINE Alu 128 304 -8 444 284 115 16 chr20 59955799 59955982 -12197900 - MIR SINE MIR -56 206 6 283 244 56 117 chr20 59956215 59956395 -12197487 + MER5A DNA MER1_type 21 189 0 238 222 264 0 chr20 59956414 59956532 -12197350 - MER5A DNA MER1_type -18 160 9 345 297 40 0 chr20 59956549 59956650 -12197232 - MER5B DNA MER1_type -1 177 73 1549 208 95 28 chr20 59956673 59957072 -12196810 - MER63B DNA MER1_type -6 430 5 300 320 6 51 chr20 59957087 59957243 -12196639 + MER5A DNA MER1_type 29 177 -12 801 224 42 0 chr20 59957657 59957822 -12196060 + FAM SINE Alu 1 172 -3 253 220 220 14 chr20 59957936 59958077 -12195805 - MIR SINE MIR -5 257 88 857 223 0 22 chr20 59958114 59958298 -12195584 - MLT1E1 LTR MaLR 0 654 475 284 288 88 0 chr20 59958817 59958897 -12194985 - MIR SINE MIR -71 191 105 1793 203 46 52 chr20 59958982 59959485 -12194397 + MLT1J LTR MaLR 12 511 0 2140 144 49 0 chr20 59960409 59960755 -12193127 - MER47A DNA MER2_type -3 363 1 873 221 42 28 chr20 59960830 59961043 -12192839 - MIR SINE MIR -2 260 45 322 217 128 117 chr20 59961163 59961282 -12192600 + L2 LINE L2 3096 3219 -94 2226 132 7 0 chr20 59961282 59961592 -12192290 - AluSx SINE Alu 0 312 1 322 217 128 117 chr20 59961592 59961652 -12192230 + L2 LINE L2 3219 3277 -36 891 281 67 68 chr20 59962171 59962901 -12190981 + L1ME LINE L1 176 904 -5301 997 291 16 12 chr20 59962916 59963318 -12190564 + L1M3d LINE L1 1265 1787 -4516 1925 176 0 28 chr20 59963324 59963792 -12190090 + AluJo SINE Alu 1 459 0 292 315 25 0 chr20 59963795 59963957 -12189925 + L1ME LINE L1 1627 1792 -4604 2000 153 3 34 chr20 59964329 59964650 -12189232 + AluJb SINE Alu 1 311 -1 2433 33 0 0 chr20 59964657 59964929 -12188953 + AluY SINE Alu 1 272 -39 214 222 0 56 chr20 59965021 59965075 -12188807 + MIR SINE MIR 35 85 -123 3498 159 56 2 chr20 59965314 59965944 -12187938 + L1MB3 LINE L1 5500 6163 -20 230 178 164 0 chr20 59965940 59966013 -12187869 + L1MB5 LINE L1 6084 6168 -6 * 278 130 0 0 chr20 59966321 59966367 -12187515 - MADE1 DNA Mariner -34 46 1 663 286 25 20 chr20 59966382 59966578 -12187304 - MIR SINE MIR -50 212 16 320 342 84 37 chr20 59966754 59966944 -12186938 - MIR SINE MIR -54 208 10 856 181 60 0 chr20 59966976 59967142 -12186740 + MER20 DNA MER1_type 44 219 0 453 248 22 29 chr20 59967219 59967356 -12186526 + L1ME4a LINE L1 5982 6117 -4 418 265 179 46 chr20 59967585 59967781 -12186101 - MIR SINE MIR -14 248 27 582 167 97 0 chr20 59968239 59968353 -12185529 - MER53 DNA DNA -64 125 1 1690 151 60 34 chr20 59968517 59968688 -12185194 - AluJo SINE Alu -6 306 122 378 0 0 0 chr20 59968688 59968730 -12185152 + (TTA)n Simple_repeat Simple_repeat 2 43 0 1690 151 60 34 chr20 59968730 59968856 -12185026 - AluJo SINE Alu -190 122 1 219 235 191 0 chr20 59968952 59969020 -12184862 + L2 LINE L2 3187 3267 -5 208 220 20 20 chr20 59969336 59969386 -12184496 - MIR SINE MIR -178 84 35 947 234 50 9 chr20 59969557 59969779 -12184103 - MIR SINE MIR -1 261 31 270 350 136 24 chr20 59970066 59970272 -12183610 - MIR SINE MIR -3 259 31 321 307 124 0 chr20 59970453 59970590 -12183292 - L2 LINE L2 -1 3312 3159 2459 203 45 0 chr20 59970710 59971202 -12182680 - MLT2B1 LTR ERVL -6 514 1 550 225 28 7 chr20 59971465 59971607 -12182275 + MLT1I LTR MaLR 76 220 -189 2358 88 0 3 chr20 59973205 59973501 -12180381 + AluSq SINE Alu 1 295 -18 487 259 14 49 chr20 59973504 59973647 -12180235 - MIR3 SINE MIR -28 180 43 539 338 31 5 chr20 59974498 59974720 -12179162 + MIR SINE MIR 5 232 -30 540 280 14 7 chr20 59974935 59975078 -12178804 - MIR SINE MIR -50 212 69 238 288 14 0 chr20 59975259 59975332 -12178550 + MLT1K LTR MaLR 169 242 -346 521 312 32 0 chr20 59975527 59975713 -12178169 + MIR SINE MIR 65 256 -6 2496 183 22 2 chr20 59976262 59976720 -12177162 + L1MB5 LINE L1 5702 6168 -6 261 260 14 0 chr20 59977296 59977369 -12176513 + MLT1K LTR MaLR 169 242 -346 501 297 93 94 chr20 59978139 59978913 -12174969 + L2 LINE L2 2485 3267 -5 2061 250 99 42 chr20 59978950 59980055 -12173827 - L1ME3A LINE L1 0 6170 4932 2227 103 10 0 chr20 59980055 59980355 -12173527 + AluSc SINE Alu 1 303 -6 2061 250 99 42 chr20 59980355 59980952 -12172930 - L1ME3A LINE L1 -1238 4932 4370 421 250 73 37 chr20 59980960 59981096 -12172786 + MER97c DNA MER1_type? 3 143 -947 932 174 0 0 chr20 59981096 59981245 -12172637 - FRAM SINE Alu -2 174 26 1092 222 112 23 chr20 59981245 59981722 -12172160 + MLT1F1 LTR MaLR 43 567 0 223 305 42 74 chr20 59981723 59981818 -12172064 - MIR SINE MIR -146 116 25 1854 160 11 3 chr20 59981820 59982107 -12171775 - AluJo SINE Alu -23 289 1 209 323 150 8 chr20 59982264 59982391 -12171491 + L2 LINE L2 2623 2767 -547 342 295 80 74 chr20 59982624 59983085 -12170797 + L2 LINE L2 1614 2077 -1237 982 236 132 40 chr20 59983347 59983770 -12170112 - MLT1C LTR MaLR 0 467 6 1079 98 0 0 chr20 59983906 59984039 -12169843 + FLAM_C SINE Alu 1 133 -10 249 167 0 74 chr20 59984056 59984110 -12169772 + L2 LINE L2 3224 3273 -40 371 197 7 20 chr20 59984157 59984304 -12169578 + (CA)n Simple_repeat Simple_repeat 1 145 0 530 271 28 11 chr20 59984306 59984483 -12169399 + (CATA)n Simple_repeat Simple_repeat 1 180 0 2397 121 103 8 chr20 59984800 59985187 -12168695 + MSTA LTR MaLR 1 424 -4 261 261 174 7 chr20 59985390 59985528 -12168354 + LTR33 LTR ERVL 10 170 -351 399 270 63 11 chr20 59985605 59985779 -12168103 + LTR33 LTR ERVL 305 487 -34 1016 222 188 15 chr20 59985779 59986352 -12167530 + L2 LINE L2 2621 3310 -3 2319 169 150 0 chr20 59986622 59987061 -12166821 + MLT1D LTR MaLR 1 505 0 330 293 129 34 chr20 59987131 59987278 -12166604 - MIR SINE MIR -90 172 12 275 237 13 13 chr20 59987715 59987791 -12166091 - MIR3 SINE MIR -30 178 103 202 311 81 0 chr20 59987809 59987883 -12165999 - L2 LINE L2 0 3313 3234 242 258 103 21 chr20 59988090 59988200 -12165682 - MIR SINE MIR -62 146 30 3477 151 31 66 chr20 59989302 59990018 -12163864 + LTR8 LTR ERV1 1 691 0 247 227 15 45 chr20 59990129 59990195 -12163687 - MIR SINE MIR -80 182 119 291 243 105 138 chr20 59990562 59990866 -12163016 + L2 LINE L2 2978 3271 -1 2189 119 0 3 chr20 59990885 59991180 -12162702 + AluSx SINE Alu 1 294 -18 25 0 0 0 chr20 59991182 59991207 -12162675 + AT_rich Low_complexity Low_complexity 1 25 0 570 301 65 36 chr20 59991610 59991680 -12162202 + Charlie8 DNA MER1_type 1 67 -274 2255 121 0 10 chr20 59991680 59991993 -12161889 - AluSx SINE Alu -2 310 1 570 301 65 36 chr20 59991993 59992198 -12161684 + Charlie8 DNA MER1_type 67 284 -57 510 343 64 26 chr20 59992376 59992688 -12161194 + L2 LINE L2 2989 3312 -1 881 260 97 39 chr20 59992848 59993229 -12160653 + MLT1C LTR MaLR 65 467 0 1771 147 90 0 chr20 59993323 59993589 -12160293 - AluSx SINE Alu -22 290 1 236 302 31 21 chr20 59994396 59994492 -12159390 + MIR SINE MIR 151 247 -15 192 77 0 0 chr20 59994505 59994531 -12159351 + (ATG)n Simple_repeat Simple_repeat 1 26 0 323 329 31 22 chr20 59995763 59995943 -12157939 - HAL1b LINE L1 -136 2371 802 993 224 36 56 chr20 59995947 59996197 -12157685 + MIR SINE MIR 18 262 0 2347 99 0 0 chr20 59996418 59996711 -12157171 + AluY SINE Alu 2 294 -17 454 366 157 26 chr20 59996716 59997098 -12156784 - HAL1 LINE L1 -757 1750 1319 229 288 105 27 chr20 59997158 59997377 -12156505 - L1MEd LINE L1 -4971 1148 913 355 396 21 39 chr20 59997381 59997664 -12156218 - HAL1 LINE L1 -1450 1057 780 2333 144 0 9 chr20 59997783 59998123 -12155759 + MER1B DNA MER1_type 1 337 0 795 252 75 4 chr20 59998681 59998935 -12154947 + MLT1J LTR MaLR 1 272 -239 2358 100 0 0 chr20 59999197 59999486 -12154396 - AluSx SINE Alu -19 293 5 1155 156 4 59 chr20 59999545 59999782 -12154100 + MLT1D LTR MaLR 14 237 -268 928 214 88 32 chr20 59999873 59999893 -12153989 + MLT1D LTR MaLR 181 198 -307 243 61 0 0 chr20 59999893 59999926 -12153956 + (TG)n Simple_repeat Simple_repeat 1 33 0 928 214 88 32 chr20 59999926 60000213 -12153669 + MLT1D LTR MaLR 198 505 0 659 222 24 0 chr20 60000277 60000403 -12153479 - MIR SINE MIR -75 187 59 261 235 50 76 chr20 60000964 60001083 -12152799 + MIR3 SINE MIR 61 176 -32 1894 129 43 13 chr20 60001257 60001559 -12152323 - AluSx SINE Alu -1 311 1 229 294 39 69 chr20 60001655 60001757 -12152125 + Charlie8 DNA MER1_type 1 99 -2318 708 264 140 24 chr20 60001765 60002215 -12151667 - MLT1J LTR MaLR -9 502 1 528 284 123 5 chr20 60002285 60002496 -12151386 - MIR SINE MIR -19 243 8 323 251 108 77 chr20 60002609 60002804 -12151078 - MIR SINE MIR -1 261 61 216 261 0 0 chr20 60002874 60002939 -12150943 + (TCCA)n Simple_repeat Simple_repeat 2 66 0 * 810 207 0 0 chr20 60002933 60003112 -12150770 + (CCCA)n Simple_repeat Simple_repeat 2 180 0 1046 153 6 9 chr20 60003130 60003598 -12150284 + (TCCA)n Simple_repeat Simple_repeat 3 642 0 628 274 287 5 chr20 60003598 60004058 -12149824 - L2 LINE L2 0 3313 2734 1971 131 0 53 chr20 60004295 60004616 -12149266 + AluJb SINE Alu 1 304 -8 507 193 67 73 chr20 60004844 60004994 -12148888 - MIR SINE MIR -70 192 44 691 256 17 17 chr20 60005112 60005284 -12148598 - MIR SINE MIR -70 192 21 326 321 111 65 chr20 60005582 60005844 -12148038 - L2 LINE L2 -16 3256 2983 312 204 171 23 chr20 60005978 60006066 -12147816 - MIR SINE MIR -113 149 49 3269 248 78 35 chr20 60007044 60007820 -12146062 - MER45B DNA AcHobo -541 1040 210 2318 114 0 0 chr20 60007820 60008128 -12145754 + AluSc SINE Alu 1 308 -1 3269 248 78 35 chr20 60008128 60008348 -12145534 - MER45B DNA AcHobo -1371 210 1 2081 127 0 22 chr20 60008466 60008781 -12145101 + AluSx SINE Alu 5 312 0 299 269 134 27 chr20 60008946 60008997 -12144885 + L2 LINE L2 2855 2899 -373 2000 135 7 0 chr20 60008997 60009308 -12144574 - AluSx SINE Alu 0 313 1 299 269 134 27 chr20 60009308 60009441 -12144441 + L2 LINE L2 2899 3060 -212 766 218 104 0 chr20 60009577 60009770 -12144112 + MER58A DNA MER1_type 3 215 -9 1749 159 42 7 chr20 60009771 60010060 -12143822 + AluSx SINE Alu 1 299 -13 286 297 19 84 chr20 60010075 60010230 -12143652 - MLT1L LTR MaLR -460 155 11 268 220 0 0 chr20 60010356 60010406 -12143476 - MER2 DNA MER2_type 0 345 296 1118 119 78 0 chr20 60010478 60010671 -12143211 - MER2 DNA MER2_type -135 210 3 410 246 11 0 chr20 60010968 60011071 -12142811 - MIR SINE MIR -67 141 49 429 109 0 0 chr20 60011804 60011859 -12142023 - Alu SINE Alu -255 63 9 937 129 0 7 chr20 60011859 60011999 -12141883 + AluSg/x SINE Alu 169 307 -5 1816 146 34 14 chr20 60012363 60012658 -12141224 - AluSq SINE Alu -12 301 1 539 296 173 0 chr20 60012687 60012907 -12140975 - MIR SINE MIR -3 259 2 689 221 13 0 chr20 60013305 60013454 -12140428 + MER58 DNA MER1_type 3 153 -2267 360 312 121 13 chr20 60013458 60013615 -12140267 + MLT1G1 LTR MaLR 96 269 -286 324 311 0 0 chr20 60013678 60013845 -12140037 + (CAG)n Simple_repeat Simple_repeat 1 167 0 * 389 292 0 17 chr20 60013761 60013939 -12139943 + (CACCAT)n Simple_repeat Simple_repeat 6 180 0 270 335 0 0 chr20 60013983 60014159 -12139723 + (CAG)n Simple_repeat Simple_repeat 3 178 0 383 299 6 0 chr20 60014199 60014373 -12139509 + (CAT)n Simple_repeat Simple_repeat 1 175 0 469 257 18 9 chr20 60014418 60014531 -12139351 + MLT1G1 LTR MaLR 440 553 -42 246 330 11 22 chr20 60014531 60014622 -12139260 - MIR SINE MIR -152 110 21 206 340 21 11 chr20 60014725 60014819 -12139063 - MIR3 SINE MIR -100 108 14 345 290 105 31 chr20 60015865 60016027 -12137855 + MER5A DNA MER1_type 13 186 -3 238 265 58 82 chr20 60016082 60016420 -12137462 - L2 LINE L2 -10 3303 3009 278 139 42 97 chr20 60016534 60016606 -12137276 + L2 LINE L2 2368 2435 -879 1379 225 41 41 chr20 60016606 60017068 -12136814 - MLT1C LTR MaLR 0 467 6 1652 229 61 78 chr20 60017075 60017147 -12136735 + L2 LINE L2 2433 2505 -808 2110 134 42 28 chr20 60017147 60017504 -12136378 - THE1B LTR MaLR 0 364 3 1652 229 61 78 chr20 60017504 60018023 -12135859 + L2 LINE L2 2505 3024 -289 683 304 75 0 chr20 60018406 60018633 -12135249 - MIR SINE MIR -18 244 1 1093 143 0 106 chr20 60018650 60018733 -12135149 - MER20 DNA MER1_type 0 219 129 1499 120 27 13 chr20 60018733 60018864 -12135018 + MER30 DNA MER1_type 3 140 -90 2060 94 3 81 chr20 60018864 60019184 -12134698 - AluSp SINE Alu -17 296 2 1499 120 27 13 chr20 60019184 60019277 -12134605 + MER30 DNA MER1_type 140 230 0 1093 143 0 106 chr20 60019277 60019438 -12134444 - MER20 DNA MER1_type -90 129 1 1161 113 36 0 chr20 60019950 60020145 -12133737 - MER46B DNA MER2_type 0 236 35 569 150 160 89 chr20 60020155 60020368 -12133514 - MER46B DNA MER2_type -133 103 1 184 227 92 113 chr20 60020469 60020610 -12133272 + MER5B DNA MER1_type 29 166 -12 321 132 0 0 chr20 60020612 60020673 -12133209 + MLT1J LTR MaLR 64 122 -328 225 231 31 31 chr20 60020756 60020821 -12133061 - MER46A DNA MER2_type -75 161 97 383 226 51 62 chr20 60020898 60021117 -12132765 + MLT1J LTR MaLR 250 508 -3 646 262 183 0 chr20 60021866 60022068 -12131814 + MIR SINE MIR 13 251 -11 3913 122 6 61 chr20 60022084 60022756 -12131126 + MER41B LTR ERV1 1 635 0 1364 287 58 39 chr20 60023487 60024023 -12129859 + MLT1K LTR MaLR 43 588 0 240 35 0 0 chr20 60024424 60024453 -12129429 + (TGAA)n Simple_repeat Simple_repeat 2 30 0 530 269 129 0 chr20 60024456 60024627 -12129255 - MIR SINE MIR -8 254 62 575 255 43 67 chr20 60024725 60024933 -12128949 + L2 LINE L2 3110 3312 -1 2142 109 0 34 chr20 60024970 60025300 -12128582 - AluSq SINE Alu 0 322 3 472 152 160 32 chr20 60025301 60025426 -12128456 - MER20 DNA MER1_type -10 209 69 512 276 31 0 chr20 60026150 60026277 -12127605 - MIR SINE MIR -44 218 88 213 341 98 25 chr20 60026282 60026558 -12127324 + L2 LINE L2 2380 2675 -639 303 340 0 31 chr20 60026728 60026825 -12127057 - L2 LINE L2 -17 3296 3203 1158 277 115 27 chr20 60026988 60027500 -12126382 - MLT1E LTR MaLR -1 592 36 407 283 53 97 chr20 60027540 60027787 -12126095 + L2 LINE L2 3001 3236 -36 403 264 28 9 chr20 60027969 60028075 -12125807 + MIR SINE MIR 44 151 -111 * 595 265 11 18 chr20 60028069 60028261 -12125621 - MIR SINE MIR -1 261 28 2300 107 7 0 chr20 60028419 60028718 -12125164 + AluSq SINE Alu 1 301 -12 2867 80 10 10 chr20 60028727 60029175 -12124707 + L1PA10 LINE L1 5750 6197 0 334 318 128 0 chr20 60029176 60029324 -12124558 + MIR SINE MIR 96 262 0 468 308 83 0 chr20 60029929 60030098 -12123784 + MIR SINE MIR 47 229 -33 910 269 98 12 chr20 60030163 60030490 -12123392 + L2 LINE L2 2815 3169 -144 706 214 86 5 chr20 60030509 60030790 -12123092 - MLT1F LTR MaLR -1 541 186 310 312 46 9 chr20 60030790 60030899 -12122983 + MIR SINE MIR 123 235 -27 682 132 52 5 chr20 60030975 60031398 -12122484 + (TCTA)n Simple_repeat Simple_repeat 1 443 0 186 143 0 0 chr20 60031415 60031450 -12122432 + (CCCA)n Simple_repeat Simple_repeat 2 36 0 345 176 198 11 chr20 60031458 60031549 -12122333 - MLT1F LTR MaLR -434 108 1 605 231 16 0 chr20 60031553 60031674 -12122208 + L2 LINE L2 3190 3312 -1 546 263 134 6 chr20 60032256 60032467 -12121415 - MIR SINE MIR -12 250 13 1948 243 42 25 chr20 60032569 60033167 -12120715 + MLT2F LTR ERVL 1 608 -55 1819 166 0 3 chr20 60033937 60034251 -12119631 + AluJb SINE Alu 1 313 0 880 204 92 5 chr20 60034386 60034592 -12119290 + MER58A DNA MER1_type 1 224 0 1845 243 48 74 chr20 60035444 60036052 -12117830 + MLT1E LTR MaLR 2 593 0 589 196 106 39 chr20 60036569 60036748 -12117134 - MIR SINE MIR -55 207 17 216 300 0 0 chr20 60036900 60036970 -12116912 + (CA)n Simple_repeat Simple_repeat 1 70 0 316 300 94 6 chr20 60037061 60037340 -12116542 + MLT1K LTR MaLR 219 573 -15 450 185 130 9 chr20 60037737 60037845 -12116037 - MIR3 SINE MIR -13 195 75 581 302 33 20 chr20 60037879 60038124 -12115758 - MIR SINE MIR -2 260 13 966 294 104 36 chr20 60038369 60038790 -12115092 - L2 LINE L2 -20 3293 2844 623 239 0 8 chr20 60039196 60039458 -12114424 + (TG)n Simple_repeat Simple_repeat 1 259 0 483 314 35 18 chr20 60040359 60040528 -12113354 + MIR SINE MIR 34 205 -57 269 315 46 61 chr20 60040673 60040870 -12113012 + MIR SINE MIR 19 212 -50 2068 144 46 30 chr20 60040876 60041245 -12112637 + THE1C LTR MaLR 1 375 0 590 301 73 12 chr20 60041397 60041643 -12112239 + MLT1K LTR MaLR 3 263 -325 183 42 0 0 chr20 60041854 60041878 -12112004 + (CAA)n Simple_repeat Simple_repeat 2 25 0 908 48 0 0 chr20 60042221 60042324 -12111558 + AluSc SINE Alu 194 296 -13 484 313 28 28 chr20 60042390 60042607 -12111275 + L2 LINE L2 2836 3052 -220 943 266 141 46 chr20 60042615 60043141 -12110741 - MLT1G1 LTR MaLR -17 578 3 197 262 9 162 chr20 60043271 60043500 -12110382 + L2 LINE L2 3119 3312 -1 243 0 0 0 chr20 60043603 60043630 -12110252 + (TCTCC)n Simple_repeat Simple_repeat 5 31 0 450 273 98 64 chr20 60043633 60043895 -12109987 + MLT1J LTR MaLR 56 333 -178 1022 277 89 54 chr20 60043895 60044466 -12109416 + MLT1E LTR MaLR 1 591 -2 450 273 98 64 chr20 60044466 60044529 -12109353 + MLT1J LTR MaLR 333 392 -119 247 335 47 55 chr20 60044777 60045031 -12108851 + L2 LINE L2 2919 3170 -102 2189 107 3 27 chr20 60045046 60045345 -12108537 - AluSx SINE Alu -20 292 1 492 260 201 6 chr20 60045384 60045553 -12108329 - MIR SINE MIR -49 213 12 492 224 40 26 chr20 60045624 60045776 -12108106 - MER117 DNA MER1_type -31 166 13 1492 219 120 0 chr20 60046572 60046946 -12106936 + MLT1E2 LTR MaLR 111 529 -97 1087 177 30 5 chr20 60047364 60047567 -12106315 - MER20 DNA MER1_type -8 211 4 249 303 34 0 chr20 60047963 60048052 -12105830 - MIR SINE MIR -93 169 78 997 215 44 9 chr20 60048244 60048472 -12105410 - MER46A DNA MER2_type 0 236 1 1931 158 102 14 chr20 60048548 60048910 -12104972 + MER61B LTR ERV1 3 396 -29 399 121 15 0 chr20 60048930 60048996 -12104886 - MSTA LTR MaLR 0 428 362 313 125 0 0 chr20 60048989 60049037 -12104845 - MSTA LTR MaLR -209 219 172 * 2551 163 13 81 chr20 60049042 60049651 -12104231 + MER4B LTR ERV1 1 568 -42 736 169 127 0 chr20 60049686 60049828 -12104054 - MSTA LTR MaLR -268 160 1 395 246 130 29 chr20 60049833 60049850 -12104032 - L1ME3A LINE L1 -8 6162 6148 1752 173 13 29 chr20 60049850 60050157 -12103725 + AluJo SINE Alu 1 302 -10 395 246 130 29 chr20 60050157 60050277 -12103605 - L1ME3A LINE L1 -22 6148 6011 2435 125 56 16 chr20 60050543 60050974 -12102908 - MER83 LTR ERV1 0 448 1 343 323 26 36 chr20 60051013 60051208 -12102674 - L1ME3A LINE L1 -375 5787 5595 329 226 176 0 chr20 60051421 60051523 -12102359 - LTR33A LTR ERVL -310 213 94 957 219 10 0 chr20 60051802 60052003 -12101879 - MER58A DNA MER1_type -21 203 1 221 178 0 22 chr20 60052145 60052190 -12101692 + GA-rich Low_complexity Low_complexity 5 48 0 2421 100 0 0 chr20 60053535 60053844 -12100038 + AluSg SINE Alu 1 309 -1 263 358 57 0 chr20 60054055 60054178 -12099704 + MIR SINE MIR 131 260 -2 3423 122 95 24 chr20 60054858 60055480 -12098402 + MER4D LTR ERV1 1 666 -237 1901 124 142 15 chr20 60055580 60056095 -12097787 + MER4A LTR ERV1 16 662 -2 1177 89 60 0 chr20 60056098 60056266 -12097616 + MER4E LTR ERV1 602 779 0 440 246 166 53 chr20 60056372 60056656 -12097226 + L2 LINE L2 2740 3059 -254 2974 185 145 42 chr20 60056725 60057621 -12096261 + LTR28 LTR ERV1 1 1660 -67 248 240 0 40 chr20 60057597 60057672 -12096210 + LTR28 LTR ERV1 948 1019 -1 * 183 282 59 47 chr20 60057678 60057763 -12096119 + L2 LINE L2 3186 3271 -1 293 300 31 31 chr20 60058383 60058513 -12095369 + MIR SINE MIR 9 138 -124 298 83 17 17 chr20 60058807 60058867 -12095015 + (TTTTA)n Simple_repeat Simple_repeat 1 60 0 2401 44 0 0 chr20 60058867 60059163 -12094719 - L1PA4 LINE L1 -24 6131 5836 771 277 52 12 chr20 60059295 60059544 -12094338 + MIR SINE MIR 2 260 -2 531 219 42 43 chr20 60059683 60059899 -12093983 - MER58 DNA MER1_type -3 2417 1 314 231 99 0 chr20 60059901 60059992 -12093890 - MIR SINE MIR -66 196 97 2417 127 38 60 chr20 60060456 60060953 -12092929 + LTR19A LTR ERV1 1 486 0 515 296 196 45 chr20 60061081 60061137 -12092745 + L2 LINE L2 2909 2955 -358 884 194 8 109 chr20 60061137 60061270 -12092612 - MER58A DNA MER1_type -2197 223 125 2327 99 3 16 chr20 60061270 60061583 -12092299 + AluSq SINE Alu 1 309 -4 884 194 8 109 chr20 60061583 60061697 -12092185 - MER58A DNA MER1_type -2295 125 1 515 296 196 45 chr20 60061697 60061992 -12091890 + L2 LINE L2 2955 3313 0 396 276 80 25 chr20 60062018 60062181 -12091701 - MIR SINE MIR 0 262 91 464 292 18 18 chr20 60062209 60062380 -12091502 - MIR3 SINE MIR -10 198 28 2079 147 18 35 chr20 60062994 60063115 -12090767 - MLT1B LTR MaLR -2 388 266 1960 105 3 67 chr20 60063115 60063455 -12090427 - AluSx SINE Alu 0 312 5 2079 147 18 35 chr20 60063455 60063728 -12090154 - MLT1B LTR MaLR -124 266 1 212 220 132 44 chr20 60063902 60063993 -12089889 + MIR SINE MIR 28 126 -136 310 290 19 56 chr20 60064855 60065017 -12088865 - MIR SINE MIR 0 262 107 297 128 0 0 chr20 60065436 60065483 -12088399 + (TG)n Simple_repeat Simple_repeat 2 48 0 1494 171 104 0 chr20 60065483 60065734 -12088148 - AluJo SINE Alu -34 278 2 2405 214 54 0 chr20 60065892 60066449 -12087433 - L1MB5 LINE L1 0 6174 5588 478 301 64 69 chr20 60066729 60067248 -12086634 + L1ME4a LINE L1 5310 5825 -296 547 207 29 86 chr20 60067570 60067630 -12086252 - MER5B DNA MER1_type -7 171 109 1729 196 21 0 chr20 60067630 60067921 -12085961 + AluJb SINE Alu 1 297 -15 547 207 29 86 chr20 60067921 60068034 -12085848 - MER5B DNA MER1_type -69 109 8 291 291 29 58 chr20 60068040 60068212 -12085670 + L2 LINE L2 2955 3121 -151 2651 228 74 39 chr20 60068623 60069368 -12084514 - L1ME1 LINE L1 -3 6163 5446 2356 105 0 0 chr20 60069368 60069672 -12084210 - AluSq SINE Alu -9 304 1 2651 228 74 39 chr20 60069672 60069856 -12084026 - L1ME1 LINE L1 -720 5446 5270 2428 96 0 0 chr20 60069856 60070157 -12083725 - AluSq SINE Alu -12 301 1 2651 228 74 39 chr20 60070157 60070426 -12083456 - L1ME1 LINE L1 -896 5270 4919 2390 97 0 0 chr20 60070594 60070892 -12082990 + AluSx SINE Alu 1 298 -14 673 291 137 24 chr20 60071013 60071553 -12082329 - L2 LINE L2 0 3313 2705 2149 96 29 0 chr20 60071561 60071841 -12082041 - AluSx SINE Alu -24 288 1 226 254 17 0 chr20 60071861 60071920 -12081962 + L2 LINE L2 3253 3312 -1 200 288 76 0 chr20 60072038 60072104 -12081778 - MIR SINE MIR -131 131 61 815 224 49 0 chr20 60072453 60072636 -12081246 + MIR SINE MIR 2 193 -69 226 237 75 54 chr20 60073243 60073336 -12080546 - MIR SINE MIR -84 124 30 526 256 110 0 chr20 60074196 60074360 -12079522 - MIR SINE MIR -4 258 77 21 0 0 0 chr20 60074407 60074428 -12079454 + AT_rich Low_complexity Low_complexity 1 21 0 2245 103 0 35 chr20 60074484 60074794 -12079088 - AluSx SINE Alu -13 299 1 2071 134 3 10 chr20 60074814 60075113 -12078769 - AluSx SINE Alu -15 297 1 350 240 15 103 chr20 60075948 60076152 -12077730 - MER5A DNA MER1_type -3 186 1 797 165 0 0 chr20 60076174 60076307 -12077575 + FLAM_C SINE Alu 1 133 0 425 177 34 0 chr20 60076512 60076612 -12077270 - MIR SINE MIR -53 209 105 621 149 50 0 chr20 60076914 60077035 -12076847 - L1MB4 LINE L1 -5 6175 6049 2303 122 0 3 chr20 60077039 60077351 -12076531 - AluSx SINE Alu -1 311 1 334 265 78 0 chr20 60077360 60077462 -12076420 - MIR SINE MIR -120 142 33 1245 220 38 10 chr20 60077486 60077536 -12076346 - L1MB7 LINE L1 -125 6059 6010 633 304 18 21 chr20 60077536 60077862 -12076020 - L1MC4 LINE L1 -2041 6001 5677 364 266 84 14 chr20 60077871 60078014 -12075868 - MIR SINE MIR -86 176 24 2210 81 3 55 chr20 60078120 60078430 -12075452 - AluSc SINE Alu -15 294 1 204 189 57 38 chr20 60078453 60078506 -12075376 + MER5B DNA MER1_type 49 102 -76 1072 148 4 107 chr20 60078508 60078752 -12075130 + MER20 DNA MER1_type 1 219 0 1894 155 31 0 chr20 60078770 60079060 -12074822 + AluJb SINE Alu 1 299 -13 372 257 160 14 chr20 60079127 60079271 -12074611 - MER5A DNA MER1_type 0 189 25 366 257 67 81 chr20 60080477 60080687 -12073195 + MIR SINE MIR 19 225 -37 1116 128 0 0 chr20 60080785 60080971 -12072911 + (CCCA)n Simple_repeat Simple_repeat 1 365 0 1116 128 0 0 chr20 60080971 60081150 -12072732 + (CCCA)n Simple_repeat Simple_repeat 2 180 0 814 252 59 93 chr20 60081250 60081711 -12072171 - L2 LINE L2 -31 3282 2838 518 315 193 0 chr20 60082724 60082937 -12070945 + MIR SINE MIR 6 259 -3 352 254 113 7 chr20 60082998 60083140 -12070742 - L1MC4 LINE L1 -429 5692 5536 427 279 19 63 chr20 60083559 60083717 -12070165 + MER91B DNA MER1_type 12 162 -28 256 288 171 27 chr20 60084012 60084158 -12069724 + MIR SINE MIR 62 228 -34 222 266 0 0 chr20 60084588 60084667 -12069215 - L2 LINE L2 -1230 2084 2006 2978 138 49 10 chr20 60084873 60085380 -12068502 - MER1A DNA MER1_type 0 527 1 1031 193 34 5 chr20 60085392 60085599 -12068283 - MER20 DNA MER1_type -6 213 1 290 297 14 0 chr20 60086305 60086379 -12067503 + MIR SINE MIR 99 173 -89 416 143 30 196 chr20 60086428 60086561 -12067321 - FLAM_A SINE Alu -9 124 14 722 287 40 20 chr20 60086680 60086927 -12066955 + MIR SINE MIR 10 261 -1 903 259 40 8 chr20 60087040 60087291 -12066591 - MIR SINE MIR -3 259 1 24 77 0 0 chr20 60088050 60088102 -12065780 + AT_rich Low_complexity Low_complexity 1 52 0 837 285 75 41 chr20 60088102 60088272 -12065610 + L2 LINE L2 2790 2953 -360 2200 79 0 38 chr20 60088272 60088587 -12065295 - AluY SINE Alu 0 304 1 837 285 75 41 chr20 60088587 60088929 -12064953 + L2 LINE L2 2953 3313 0 465 246 70 21 chr20 60088923 60089065 -12064817 - MIR SINE MIR -61 201 53 * 23 54 0 0 chr20 60089840 60089877 -12064005 + AT_rich Low_complexity Low_complexity 1 37 0 183 250 0 0 chr20 60090589 60090629 -12063253 + L2 LINE L2 3263 3302 -11 354 339 17 23 chr20 60090766 60090943 -12062939 - MIR3 SINE MIR 0 208 33 302 282 126 0 chr20 60091130 60091233 -12062649 - L2 LINE L2 -5 3308 3193 782 169 39 45 chr20 60091337 60091515 -12062367 - MER53 DNA DNA -12 177 1 545 319 47 17 chr20 60091515 60092003 -12061879 - L2 LINE L2 -247 3066 2563 2272 113 3 0 chr20 60092669 60092970 -12060912 + AluSx SINE Alu 5 306 -6 497 328 121 23 chr20 60093562 60093959 -12059923 - L2 LINE L2 -1 3271 2836 34 55 0 0 chr20 60094225 60094280 -12059602 + AT_rich Low_complexity Low_complexity 1 55 0 2288 106 0 0 chr20 60094483 60094796 -12059086 - AluSx SINE Alu 0 314 2 538 306 38 38 chr20 60095112 60095206 -12058676 - MIR SINE MIR -21 241 148 2459 91 0 3 chr20 60095206 60095513 -12058369 - AluSq SINE Alu -7 306 1 538 306 38 38 chr20 60095513 60095627 -12058255 - MIR SINE MIR -113 149 33 2332 107 0 0 chr20 60095648 60095946 -12057936 - AluSx SINE Alu -14 298 1 2276 105 7 3 chr20 60096688 60096992 -12056890 - AluSq SINE Alu -8 305 1 373 301 66 30 chr20 60097023 60097189 -12056693 - MIR SINE MIR -64 198 27 651 292 32 9 chr20 60097515 60097734 -12056148 + MIR SINE MIR 20 243 -19 236 311 74 8 chr20 60098067 60098189 -12055693 + MIR3 SINE MIR 75 204 -4 514 234 62 14 chr20 60099502 60099647 -12054235 - MER103 DNA DNA -1 165 14 2118 142 0 19 chr20 60100177 60100520 -12053362 - AluSx SINE Alu 0 337 1 23 0 0 0 chr20 60100532 60100555 -12053327 + AT_rich Low_complexity Low_complexity 1 23 0 1403 156 54 30 chr20 60100675 60100970 -12052912 - L1PA16 LINE L1 0 6166 5865 207 146 0 49 chr20 60101285 60101326 -12052556 + (TTCC)n Simple_repeat Simple_repeat 2 40 0 420 234 196 19 chr20 60101837 60101995 -12051887 + MIR SINE MIR 77 262 0 354 324 189 17 chr20 60102271 60102509 -12051373 - L2 LINE L2 0 3313 3035 399 171 0 0 chr20 60103158 60103234 -12050648 + (CA)n Simple_repeat Simple_repeat 2 77 0 508 242 48 8 chr20 60103441 60103565 -12050317 - MIR SINE MIR -17 245 117 331 315 73 56 chr20 60103631 60103863 -12050019 - L2 LINE L2 0 3313 3078 310 328 33 16 chr20 60104928 60105050 -12048832 + MIR3 SINE MIR 63 186 -22 1051 118 21 16 chr20 60105764 60105950 -12047932 - L1MA1 LINE L1 0 6302 6116 260 274 0 0 chr20 60107221 60107283 -12046599 + MER103 DNA DNA 56 117 -49 283 333 7 22 chr20 60108771 60108909 -12044973 + CT-rich Low_complexity Low_complexity 1 136 0 555 285 77 59 chr20 60108909 60109299 -12044583 - L2 LINE L2 -13 3300 2904 339 302 9 9 chr20 60109304 60109410 -12044472 - L2 LINE L2 -573 2741 2636 381 257 158 11 chr20 60110087 60110270 -12043612 - L1ME3A LINE L1 -73 6097 5888 456 284 71 0 chr20 60110271 60110412 -12043470 + MIR SINE MIR 56 206 -56 2201 128 3 0 chr20 60110444 60110750 -12043132 - AluSx SINE Alu -5 307 1 886 185 20 91 chr20 60111822 60112076 -12041806 - MER106A DNA MER1_type 0 236 1 231 345 9 26 chr20 60112410 60112526 -12041356 + MIR SINE MIR 149 262 0 2075 132 3 16 chr20 60113631 60113941 -12039941 - AluJo SINE Alu -6 306 1 897 248 25 61 chr20 60115112 60115390 -12038492 + Charlie8 DNA MER1_type 9 276 -2141 352 259 15 38 chr20 60115667 60115798 -12038084 - L1MC5 LINE L1 -37 7924 7797 934 218 0 0 chr20 60115858 60116032 -12037850 - FAM SINE Alu -1 174 1 1868 188 61 145 chr20 60116042 60116978 -12036904 - L1MC5 LINE L1 -184 7777 6921 766 275 57 19 chr20 60117288 60117722 -12036160 - MLT1J LTR MaLR -1 510 24 616 226 138 11 chr20 60117808 60117989 -12035893 - L2 LINE L2 -1 3312 3109 2272 109 0 3 chr20 60117993 60118296 -12035586 + AluSx SINE Alu 11 312 0 1095 190 39 0 chr20 60118442 60118647 -12035235 - MER20 DNA MER1_type -4 215 3 537 323 109 19 chr20 60119144 60119556 -12034326 - L2 LINE L2 -1 3312 2864 411 284 155 7 chr20 60120137 60120292 -12033590 + MIR SINE MIR 83 260 -2 2105 132 0 7 chr20 60120671 60120966 -12032916 - AluSx SINE Alu -18 294 2 493 319 6 16 chr20 60121152 60121334 -12032548 + L1MC/D LINE L1 5481 5660 -2148 309 250 0 0 chr20 60121548 60121616 -12032266 + L1MC/D LINE L1 5691 5758 -2050 1955 159 17 3 chr20 60121683 60121979 -12031903 - AluJo SINE Alu -12 300 1 2361 100 7 0 chr20 60122241 60122540 -12031342 - AluSx SINE Alu -11 301 1 180 0 0 0 chr20 60122667 60122687 -12031195 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 182 207 52 35 chr20 60122822 60122880 -12031002 + L2 LINE L2 3255 3313 0 634 212 146 0 chr20 60122976 60123127 -12030755 - MIR SINE MIR -18 244 72 1742 155 6 40 chr20 60123148 60123470 -12030412 - AluJo SINE Alu -1 311 1 180 145 26 40 chr20 60123932 60124008 -12029874 + G-rich Low_complexity Low_complexity 5 79 0 180 0 0 0 chr20 60124019 60124039 -12029843 + (TTCTCC)n Simple_repeat Simple_repeat 6 25 0 201 214 48 0 chr20 60125050 60125092 -12028790 - L2 LINE L2 -5 3267 3224 2293 122 0 0 chr20 60125119 60125430 -12028452 + AluSx SINE Alu 1 311 -1 249 83 0 0 chr20 60125492 60125528 -12028354 + (TG)n Simple_repeat Simple_repeat 1 36 0 819 296 5 14 chr20 60125693 60125916 -12027966 + MIR SINE MIR 29 249 -13 228 211 0 0 chr20 60125923 60125961 -12027921 + (CCA)n Simple_repeat Simple_repeat 3 40 0 454 269 237 0 chr20 60125965 60126184 -12027698 - L2 LINE L2 -19 3294 3024 246 206 0 49 chr20 60126304 60126406 -12027476 + CT-rich Low_complexity Low_complexity 4 100 0 1332 220 54 73 chr20 60126567 60126718 -12027164 - L1MC5 LINE L1 -225 7736 7584 2612 53 0 0 chr20 60126718 60127018 -12026864 - AluY SINE Alu -11 300 1 1332 220 54 73 chr20 60127018 60127417 -12026465 - L1MC5 LINE L1 -377 7584 7196 882 283 58 44 chr20 60127468 60127920 -12025962 - L1ME3A LINE L1 -273 5897 5440 573 250 21 0 chr20 60128005 60128145 -12025737 + MER5A DNA MER1_type 38 180 -9 596 275 40 19 chr20 60128155 60128412 -12025470 - L1ME3A LINE L1 -1052 5094 4817 2437 87 3 0 chr20 60128415 60128715 -12025167 - AluSx SINE Alu -11 301 1 437 273 139 83 chr20 60129515 60129948 -12023934 - L2 LINE L2 0 3313 2857 415 280 68 0 chr20 60130738 60130870 -12023012 + MIR SINE MIR 64 204 -58 1843 92 0 0 chr20 60130870 60131097 -12022785 + AluSq SINE Alu 1 227 -86 474 266 0 0 chr20 60131186 60131295 -12022587 - L2 LINE L2 -2 3311 3203 217 286 12 24 chr20 60132427 60132511 -12021371 - MIR SINE MIR -115 147 65 * 473 286 85 11 chr20 60132510 60132699 -12021183 - MIR SINE MIR -20 242 40 1359 203 25 67 chr20 60133051 60133410 -12020472 - MLT1A2 LTR MaLR 0 374 31 1668 128 124 8 chr20 60135594 60135859 -12018023 - AluSg1 SINE Alu -13 296 1 246 325 60 0 chr20 60135859 60135942 -12017940 - MIR SINE MIR -62 200 113 187 385 0 0 chr20 60136067 60136163 -12017719 + MIR SINE MIR 48 143 -119 517 255 227 25 chr20 60136788 60137110 -12016772 - L2 LINE L2 -738 2576 2190 1679 79 151 4 chr20 60139767 60140019 -12013863 + AluSg SINE Alu 1 289 -21 519 17 0 0 chr20 60140852 60140912 -12012970 + (TA)n Simple_repeat Simple_repeat 1 60 0 868 213 104 0 chr20 60140914 60141116 -12012766 + MER58A DNA MER1_type 2 224 0 413 250 196 27 chr20 60141645 60141829 -12012053 + MIR SINE MIR 48 262 0 705 242 121 5 chr20 60143551 60143774 -12010108 - MIR SINE MIR -6 256 8 612 246 174 15 chr20 60143868 60144063 -12009819 - MIR SINE MIR -1 261 36 1577 133 125 19 chr20 60145135 60145391 -12008491 + AluJo SINE Alu 5 287 -25 208 266 202 0 chr20 60150091 60150185 -12003697 - MIR SINE MIR -72 190 78 227 200 55 0 chr20 60151305 60151360 -12002522 + MIR SINE MIR 113 170 -92 671 299 146 36 chr20 60152490 60153378 -12000504 + L2 LINE L2 2273 3312 -1 279 312 234 0 chr20 60154172 60154480 -11999402 + L2 LINE L2 17 396 -2918 1740 235 27 41 chr20 60154484 60154973 -11998909 - MLT1D LTR MaLR -21 484 3 1813 153 55 30 chr20 60154975 60155341 -11998541 + MSTC LTR MaLR 53 427 -1 197 313 0 60 chr20 60155343 60155426 -11998456 - L2 LINE L2 -50 3263 3186 1027 299 129 17 chr20 60155445 60156036 -11997846 + L2 LINE L2 2318 2974 -340 2154 142 39 57 chr20 60156140 60156578 -11997304 + MSTB1 LTR MaLR 1 430 -2 206 307 110 6 chr20 60156628 60156791 -11997091 - L2 LINE L2 -765 2549 2370 2106 124 0 0 chr20 60157065 60157383 -11996499 - AluSx SINE Alu 0 318 1 292 229 57 0 chr20 60157481 60157551 -11996331 + MIR SINE MIR 71 144 -64 458 302 40 40 chr20 60157716 60157938 -11995944 - MER112 DNA MER1_type 0 260 39 500 288 64 55 chr20 60159297 60159533 -11994349 + MIR SINE MIR 15 252 -10 420 281 25 25 chr20 60159516 60159637 -11994245 - L2 LINE L2 -5 3308 3188 * 234 237 54 54 chr20 60159797 60159890 -11993992 + MIR SINE MIR 5 97 -165 327 231 83 50 chr20 60160048 60160169 -11993713 + MIR SINE MIR 101 225 -37 799 106 0 45 chr20 60160184 60160316 -11993566 + MER2 DNA MER2_type 48 173 -172 2344 112 0 0 chr20 60160700 60161004 -11992878 + AluSx SINE Alu 1 304 -8 225 233 17 0 chr20 60161213 60161273 -11992609 + MER103 DNA DNA 31 91 -75 2287 104 13 0 chr20 60161363 60161670 -11992212 + AluSp SINE Alu 2 312 -1 24 0 0 0 chr20 60161670 60161694 -11992188 + AT_rich Low_complexity Low_complexity 1 24 0 277 219 37 24 chr20 60161701 60161783 -11992099 + CT-rich Low_complexity Low_complexity 1 83 0 264 194 45 15 chr20 60161793 60161860 -11992022 - L2 LINE L2 -41 3231 3163 438 287 81 15 chr20 60161894 60162030 -11991852 - MIR3 SINE MIR -48 160 16 2240 119 0 7 chr20 60162377 60162687 -11991195 - AluSg SINE Alu -2 308 1 2019 98 3 42 chr20 60162687 60162972 -11990910 - AluSg SINE Alu -19 291 18 254 86 0 0 chr20 60163293 60163328 -11990554 + Alu SINE Alu 1 35 -265 1007 201 0 0 chr20 60163349 60163523 -11990359 + FRAM SINE Alu 1 167 -9 1778 136 62 77 chr20 60164303 60164382 -11989500 + MER7A DNA MER2_type 1 80 -2958 2213 125 13 0 chr20 60164382 60164686 -11989196 - AluSx SINE Alu -4 308 1 1778 136 62 77 chr20 60164686 60164702 -11989180 + MER7A DNA MER2_type 80 95 -2943 1787 183 3 13 chr20 60164702 60165013 -11988869 - AluJb SINE Alu -4 308 1 1778 136 62 77 chr20 60165013 60165269 -11988613 + MER7A DNA MER2_type 95 346 0 536 310 53 25 chr20 60165879 60166124 -11987758 - L1ME4a LINE L1 -29 6092 5841 214 316 61 53 chr20 60166389 60166503 -11987379 + MER5B DNA MER1_type 4 118 -60 247 309 9 18 chr20 60166650 60166760 -11987122 - L1MEc LINE L1 -5500 896 788 357 341 34 0 chr20 60167250 60167429 -11986453 - L1MEc LINE L1 -6097 299 115 2136 122 7 7 chr20 60167442 60167730 -11986152 - AluSx SINE Alu -24 288 1 313 320 39 52 chr20 60167811 60167964 -11985918 + L2 LINE L2 3118 3268 -4 497 261 29 22 chr20 60168056 60168194 -11985688 - L2 LINE L2 -6 3307 3169 * 520 286 200 0 chr20 60168180 60168355 -11985527 - MIR SINE MIR 0 262 53 216 97 0 0 chr20 60168809 60168840 -11985042 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1777 168 4 4 chr20 60168842 60169116 -11984766 - AluJo SINE Alu -30 282 9 219 214 0 0 chr20 60169471 60169513 -11984369 + (TCTCTG)n Simple_repeat Simple_repeat 1 42 0 349 306 19 0 chr20 60169820 60169928 -11983954 - L2 LINE L2 -21 3251 3142 236 278 153 0 chr20 60170122 60170194 -11983688 - L2 LINE L2 -241 3072 2990 929 301 168 18 chr20 60170247 60170874 -11983008 - L2 LINE L2 -338 2976 2256 334 252 62 86 chr20 60171117 60171327 -11982555 - Charlie8 DNA MER1_type -2140 277 73 1153 147 0 0 chr20 60171538 60171708 -11982174 + FRAM SINE Alu 4 173 -3 518 290 184 30 chr20 60172892 60173299 -11980583 - L2 LINE L2 -2 3311 2842 480 332 9 35 chr20 60174377 60174603 -11979279 - MIR SINE MIR -41 221 2 339 340 63 14 chr20 60174999 60175187 -11978695 - MIR SINE MIR -57 205 7 192 273 0 0 chr20 60175949 60175993 -11977889 - MIR SINE MIR 0 262 219 365 253 47 16 chr20 60176158 60176280 -11977602 - MIR SINE MIR -62 146 33 278 339 18 18 chr20 60176264 60176373 -11977509 + MIR SINE MIR 154 262 0 * 196 335 13 0 chr20 60176578 60176669 -11977213 - MIR SINE MIR -79 129 54 319 313 26 26 chr20 60176789 60176904 -11976978 - L1MC4 LINE L1 -1339 6703 6589 2556 60 0 22 chr20 60177001 60177319 -11976563 + AluY SINE Alu 1 311 0 456 291 39 7 chr20 60177547 60177686 -11976196 - MIR SINE MIR -59 149 9 503 71 0 0 chr20 60177720 60177790 -11976092 - L1PB1 LINE L1 0 6151 6082 1957 138 0 40 chr20 60177885 60178020 -11975862 + AluSx SINE Alu 1 140 -172 2300 82 4 0 chr20 60178020 60178301 -11975581 + AluSp SINE Alu 22 303 -10 1957 138 0 40 chr20 60178301 60178462 -11975420 + AluSx SINE Alu 140 285 -27 344 297 97 40 chr20 60178867 60179042 -11974840 + MIR SINE MIR 46 230 -32 1651 180 3 37 chr20 60179685 60179985 -11973897 + AluJo SINE Alu 1 290 -22 290 232 71 0 chr20 60180105 60180161 -11973721 - L2 LINE L2 -4 3268 3209 274 346 12 0 chr20 60180168 60180249 -11973633 + MER5A DNA MER1_type 14 95 -94 1061 207 23 18 chr20 60180291 60180508 -11973374 + MER58A DNA MER1_type 2 219 -5 853 289 68 41 chr20 60180509 60180920 -11972962 - L2 LINE L2 -57 3256 2835 399 318 57 51 chr20 60181034 60181210 -11972672 + MER91B DNA MER1_type 14 190 0 552 126 16 68 chr20 60181475 60181665 -11972217 + G-rich Low_complexity Low_complexity 1 180 0 279 303 91 15 chr20 60181717 60181849 -11972033 + MIR3 SINE MIR 67 208 0 21 36 0 0 chr20 60181996 60182024 -11971858 + AT_rich Low_complexity Low_complexity 1 28 0 195 161 0 0 chr20 60182040 60182071 -11971811 - MIR3 SINE MIR -24 184 154 415 294 57 36 chr20 60182151 60182345 -11971537 - MIR SINE MIR -14 248 51 355 264 189 38 chr20 60182372 60182531 -11971351 - MIR SINE MIR -13 249 67 2173 113 37 0 chr20 60182550 60182850 -11971032 - AluSx SINE Alu -1 311 1 930 255 84 49 chr20 60182990 60183526 -11970356 + L2 LINE L2 2547 3118 -195 1971 133 39 0 chr20 60183526 60183805 -11970077 - AluSx SINE Alu -22 290 1 930 255 84 49 chr20 60183805 60183985 -11969897 + L2 LINE L2 3118 3290 -23 181 189 38 57 chr20 60185173 60185226 -11968656 + MIR SINE MIR 34 85 -123 215 366 61 0 chr20 60185424 60185506 -11968376 - L2 LINE L2 -50 3222 3136 688 201 210 1 chr20 60185531 60185745 -11968137 + MIR SINE MIR 7 262 0 210 255 163 10 chr20 60185828 60185926 -11967956 - L2 LINE L2 -204 3068 2956 502 275 95 25 chr20 60185980 60186264 -11967618 + MER102b DNA MER1_type 35 338 -3 1844 154 3 10 chr20 60186934 60187232 -11966650 + AluJb SINE Alu 1 296 -16 254 280 119 59 chr20 60188265 60188383 -11965499 - MIR SINE MIR -11 251 127 566 293 86 14 chr20 60188985 60189207 -11964675 - MIR SINE MIR -8 254 17 480 35 0 0 chr20 60190402 60190460 -11963422 + (TG)n Simple_repeat Simple_repeat 2 59 0 226 299 0 0 chr20 60190588 60190655 -11963227 - MER63B DNA MER1_type 0 435 369 * 759 310 37 0 chr20 60190649 60190894 -11962988 - MER63B DNA MER1_type -182 254 1 337 254 64 9 chr20 60191027 60191137 -11962745 + Charlie4 DNA MER1_type 1840 1955 -6 34 24 0 0 chr20 60191507 60191548 -11962334 + AT_rich Low_complexity Low_complexity 1 41 0 622 191 0 0 chr20 60191548 60191642 -11962240 - FLAM_A SINE Alu -42 100 7 414 232 137 19 chr20 60191660 60191871 -11962011 - MER113 DNA MER1_type? -279 242 7 666 269 59 43 chr20 60191932 60192185 -11961697 + MIR SINE MIR 6 262 0 229 250 0 0 chr20 60192811 60192867 -11961015 - MLT1J LTR MaLR -4 507 452 2263 89 7 3 chr20 60193123 60193415 -11960467 - AluSx SINE Alu -19 293 1 674 282 37 22 chr20 60193436 60193709 -11960173 - L2 LINE L2 -557 2757 2481 919 211 9 69 chr20 60193756 60193988 -11959894 + MER20 DNA MER1_type 2 219 0 1102 126 0 23 chr20 60194813 60194988 -11958894 - L1PA10 LINE L1 -2 6166 5996 1074 257 143 30 chr20 60195624 60196089 -11957793 - L2 LINE L2 -1 3312 2775 1891 126 0 0 chr20 60196089 60196351 -11957531 - AluSx SINE Alu -7 305 44 1074 257 143 30 chr20 60196351 60196368 -11957514 - L2 LINE L2 -538 2775 2761 585 332 40 0 chr20 60196523 60196722 -11957160 - MIR SINE MIR -54 208 2 584 300 81 66 chr20 60197807 60198590 -11955292 - L2 LINE L2 -50 3263 2460 219 36 0 0 chr20 60198679 60198707 -11955175 + (TG)n Simple_repeat Simple_repeat 1 28 0 511 276 68 0 chr20 60199233 60199396 -11954486 - MER96 DNA MER1_type -1 174 1 1387 126 53 15 chr20 60199533 60199796 -11954086 + L1MA7 LINE L1 6019 6291 0 388 300 42 0 chr20 60200291 60200411 -11953471 + MIR SINE MIR 71 195 -67 332 332 91 58 chr20 60201503 60201744 -11952138 - MIR SINE MIR -12 250 2 216 297 0 16 chr20 60201940 60202004 -11951878 + CT-rich Low_complexity Low_complexity 2 64 0 2145 132 0 0 chr20 60202022 60202317 -11951565 - AluSx SINE Alu -17 295 1 460 268 37 37 chr20 60202437 60202615 -11951267 + MIR SINE MIR 6 181 -61 1715 177 10 16 chr20 60202681 60202986 -11950896 - AluJb SINE Alu -8 304 2 213 318 28 47 chr20 60203041 60203148 -11950734 - L2 LINE L2 -78 3235 3131 675 193 30 37 chr20 60203156 60203291 -11950591 + MER63 DNA MER1_type 1 760 -76 262 268 14 14 chr20 60203289 60203360 -11950522 + MER63 DNA MER1_type 984 1054 -7 * 745 316 101 9 chr20 60203378 60203803 -11950079 - L2 LINE L2 -289 3024 2542 1013 176 65 20 chr20 60204290 60204489 -11949393 + MER3 DNA MER1_type 1 208 -1 188 398 34 0 chr20 60204608 60204696 -11949186 - MIR SINE MIR -59 149 59 597 110 0 0 chr20 60204741 60204832 -11949050 + (TA)n Simple_repeat Simple_repeat 1 91 0 627 316 133 22 chr20 60205034 60205575 -11948307 - L1MC4a LINE L1 -1893 5915 5315 545 271 90 43 chr20 60205591 60205846 -11948036 - L2 LINE L2 0 3313 3047 396 252 78 0 chr20 60205846 60205949 -11947933 - L1MC4a LINE L1 -844 5302 5192 1763 29 0 0 chr20 60206039 60206246 -11947636 + L1PA4 LINE L1 5949 6155 0 287 294 4 19 chr20 60206433 60206554 -11947328 - L1MC/D LINE L1 -298 5823 5700 2263 112 7 7 chr20 60207054 60207359 -11946523 + AluSx SINE Alu 1 305 -7 24 32 0 0 chr20 60207436 60207467 -11946415 + AT_rich Low_complexity Low_complexity 1 31 0 966 270 16 7 chr20 60207567 60207875 -11946007 - L1MD3 LINE L1 -3 8031 7743 380 313 151 6 chr20 60208749 60208928 -11944954 - MIR SINE MIR -12 250 46 322 361 45 0 chr20 60209002 60209135 -11944747 - L2 LINE L2 -17 3255 3117 2244 104 50 0 chr20 60209402 60209699 -11944183 + AluSx SINE Alu 1 312 0 485 225 13 114 chr20 60209861 60210042 -11943840 - MER102b DNA MER1_type -1088 340 142 2064 120 0 17 chr20 60210042 60210352 -11943530 - AluSx SINE Alu 0 312 1 674 102 0 0 chr20 60210352 60210440 -11943442 - L1PA10 LINE L1 -14 6154 6067 485 225 13 114 chr20 60210440 60210493 -11943389 - MER102b DNA MER1_type -1284 144 129 180 333 32 16 chr20 60211259 60211322 -11942560 - MIR3 SINE MIR -50 158 95 180 224 17 17 chr20 60211357 60211415 -11942467 + L2 LINE L2 1984 2041 -1273 1384 211 82 33 chr20 60212365 60212792 -11941090 - MLT1C LTR MaLR 0 467 20 212 269 64 26 chr20 60212870 60212948 -11940934 + L2 LINE L2 2887 2967 -305 210 167 21 42 chr20 60212946 60212994 -11940888 + MER5B DNA MER1_type 8 54 -124 * 2410 97 0 0 chr20 60313052 60313360 -11840522 + AluSq SINE Alu 1 308 -5 264 362 117 61 chr20 60315412 60315788 -11838094 + L2 LINE L2 2851 3247 -25 234 0 0 0 chr20 60315852 60315878 -11838004 + (TTG)n Simple_repeat Simple_repeat 2 27 0 2244 71 0 27 chr20 60315883 60316178 -11837704 - AluY SINE Alu -24 287 1 957 191 27 32 chr20 60316576 60316796 -11837086 + MER20 DNA MER1_type 1 219 0 230 297 16 0 chr20 60318131 60318195 -11835687 - L2 LINE L2 0 3313 3249 640 251 86 16 chr20 60318202 60318389 -11835493 - MER63A DNA MER1_type -10 200 1 573 263 71 22 chr20 60318398 60318622 -11835260 - L2 LINE L2 -81 3232 2998 361 273 21 2 chr20 60319108 60319221 -11834661 - MIR SINE MIR -67 141 28 437 316 79 11 chr20 60319668 60319845 -11834037 - MIR SINE MIR -54 208 20 225 385 46 40 chr20 60320221 60320299 -11833583 - L3 LINE CR1 -1043 534 458 2341 117 0 0 chr20 60320299 60320608 -11833274 + AluSx SINE Alu 1 309 -3 225 385 46 40 chr20 60320608 60320814 -11833068 - L3 LINE CR1 -1119 458 245 2702 89 11 3 chr20 60320814 60321175 -11832707 + THE1B LTR MaLR 1 364 0 225 385 46 40 chr20 60321175 60321214 -11832668 - L3 LINE CR1 -1332 245 208 1122 159 30 5 chr20 60321215 60321416 -11832466 - MER3 DNA MER1_type -2 207 2 592 342 65 4 chr20 60321547 60321778 -11832104 + MIR SINE MIR 9 253 -9 333 298 49 57 chr20 60322541 60322683 -11831199 + MIR SINE MIR 15 154 -63 797 216 100 0 chr20 60322725 60322915 -11830967 + MER3 DNA MER1_type 1 209 0 249 313 54 18 chr20 60324569 60324681 -11829201 + L2 LINE L2 3198 3313 0 194 349 26 31 chr20 60324757 60324904 -11828978 - MIR SINE MIR -61 147 3 215 280 11 0 chr20 60325689 60325782 -11828100 + (TA)n Simple_repeat Simple_repeat 1 94 0 224 266 0 16 chr20 60325783 60325847 -11828035 + (CA)n Simple_repeat Simple_repeat 2 64 0 311 354 23 0 chr20 60325850 60325980 -11827902 - L1MC/D LINE L1 -2051 5757 5625 32 26 0 0 chr20 60325986 60326025 -11827857 + AT_rich Low_complexity Low_complexity 1 39 0 245 299 0 0 chr20 60326123 60326190 -11827692 + MIR SINE MIR 190 256 -6 266 270 70 60 chr20 60327364 60327464 -11826418 + MIR SINE MIR 31 131 -77 2941 112 4 11 chr20 60327567 60328021 -11825861 + L1PA14 LINE L1 5711 6161 0 616 276 0 26 chr20 60328266 60328458 -11825424 - MIR SINE MIR -10 252 66 303 230 0 0 chr20 60329794 60329881 -11824001 + GA-rich Low_complexity Low_complexity 2 88 0 571 319 98 7 chr20 60330421 60330850 -11823032 + L1ME3 LINE L1 5410 5877 -293 362 358 106 7 chr20 60332218 60332369 -11821513 - L2 LINE L2 -6 3266 3101 1610 193 75 27 chr20 60332383 60332425 -11821457 + Charlie4a DNA MER1_type 36 74 -1887 2398 83 0 13 chr20 60332425 60332738 -11821144 - AluY SINE Alu -2 309 1 1610 193 75 27 chr20 60332738 60333146 -11820736 + Charlie4a DNA MER1_type 74 508 0 312 91 0 0 chr20 60333736 60333780 -11820102 + (CA)n Simple_repeat Simple_repeat 2 45 0 2790 183 28 40 chr20 60333788 60334396 -11819486 + MER82 DNA MER2_type 52 652 -1 1455 163 50 13 chr20 60334403 60334704 -11819178 - MLT2C1 LTR ERVL -83 314 3 263 316 0 0 chr20 60335298 60335377 -11818505 + MER58 DNA MER1_type 2341 2419 -1 438 246 0 8 chr20 60335925 60336043 -11817839 + L1ME3 LINE L1 6043 6159 -3 300 102 0 0 chr20 60336117 60336166 -11817716 + (CA)n Simple_repeat Simple_repeat 2 50 0 198 0 0 0 chr20 60336228 60336250 -11817632 + (CA)n Simple_repeat Simple_repeat 1 22 0 1196 196 118 7 chr20 60338686 60338992 -11814890 - MER58B DNA MER1_type 0 341 2 195 114 0 0 chr20 60340024 60340059 -11813823 + (GA)n Simple_repeat Simple_repeat 2 36 0 1923 33 0 16 chr20 60340484 60340729 -11813153 - L1PA4 LINE L1 -350 5805 5565 3053 25 0 6 chr20 60340729 60341085 -11812797 + L1PA4 LINE L1 5798 6154 -1 213 265 20 0 chr20 60342074 60342123 -11811759 + L3 LINE CR1 1245 1294 -283 211 271 206 47 chr20 60342214 60342321 -11811561 - MER5B DNA MER1_type -4 174 51 641 279 192 47 chr20 60342372 60342583 -11811299 + L2 LINE L2 2824 3003 -310 1758 186 28 85 chr20 60342583 60342900 -11810982 - MLT1C LTR MaLR 0 467 186 1477 189 28 21 chr20 60342900 60343060 -11810822 - AluJb SINE Alu -24 288 124 1835 111 4 23 chr20 60343060 60343322 -11810560 - AluSx SINE Alu -16 296 40 1477 189 28 21 chr20 60343322 60343447 -11810435 - AluJb SINE Alu -188 124 1 1758 186 28 85 chr20 60343447 60343624 -11810258 - MLT1C LTR MaLR -281 186 1 641 279 192 47 chr20 60343624 60343839 -11810043 + L2 LINE L2 3003 3312 -1 581 371 19 23 chr20 60343842 60344101 -11809781 + L3 LINE CR1 1319 1576 -1 23 0 0 0 chr20 60344294 60344317 -11809565 + AT_rich Low_complexity Low_complexity 1 23 0 26 50 0 0 chr20 60344949 60344989 -11808893 + AT_rich Low_complexity Low_complexity 1 40 0 470 260 137 44 chr20 60344990 60345198 -11808684 - L1ME4a LINE L1 -9 6181 5994 1071 218 18 0 chr20 60345198 60345418 -11808464 - MER58A DNA MER1_type 0 224 1 470 260 137 44 chr20 60345418 60345618 -11808264 - L1ME4a LINE L1 -196 5994 5732 906 255 17 0 chr20 60345985 60346224 -11807658 - L1ME4a LINE L1 -503 5730 5488 * 4215 247 30 19 chr20 60346217 60348032 -11805850 - L1ME4a LINE L1 -1128 5087 3272 2342 250 108 46 chr20 60348033 60349951 -11803931 - L1MEc LINE L1 -3589 2626 660 654 203 60 44 chr20 60349969 60350151 -11803731 + MER20 DNA MER1_type 7 191 -28 619 333 67 14 chr20 60350335 60350756 -11803126 - L1MEc LINE L1 -5919 477 35 1167 135 0 0 chr20 60350991 60351154 -11802728 - AluSg/x SINE Alu -9 303 141 272 176 20 0 chr20 60351249 60351300 -11802582 - L2 LINE L2 -4 3309 3258 6105 173 15 31 chr20 60351336 60352646 -11801236 + L1MC3 LINE L1 6481 7769 -16 1372 287 136 50 chr20 60352651 60353117 -11800765 - L2 LINE L2 -78 3235 2811 2272 110 0 3 chr20 60353117 60353425 -11800457 + AluSq SINE Alu 1 307 -6 1372 287 136 50 chr20 60353425 60353943 -11799939 - L2 LINE L2 -502 2811 2153 230 300 86 0 chr20 60353955 60354025 -11799857 - L2 LINE L2 -35 3278 3203 5202 84 7 5 chr20 60355097 60355856 -11798026 + L1MA1 LINE L1 5514 6273 -29 359 136 0 34 chr20 60355869 60355957 -11797925 + (TA)n Simple_repeat Simple_repeat 1 85 0 260 324 10 10 chr20 60355966 60356068 -11797814 + Charlie8 DNA MER1_type 130 231 -2186 740 219 22 67 chr20 60356141 60356365 -11797517 + MER20 DNA MER1_type 1 214 -5 334 294 37 9 chr20 60356552 60356661 -11797221 - MIR SINE MIR -3 259 148 853 318 9 9 chr20 60356755 60356988 -11796894 + MIR SINE MIR 29 261 -1 195 69 0 0 chr20 60357002 60357031 -11796851 + (TTG)n Simple_repeat Simple_repeat 2 30 0 341 246 44 35 chr20 60357062 60357176 -11796706 - MLT1K LTR MaLR -123 465 351 421 299 81 27 chr20 60357243 60357464 -11796418 - MLT1K LTR MaLR -348 240 8 275 289 155 9 chr20 60357464 60357572 -11796310 - MIR SINE MIR -63 145 34 369 331 125 40 chr20 60357713 60358344 -11795538 + L1MC4a LINE L1 4462 5146 -1000 1485 249 27 14 chr20 60358370 60358815 -11795067 + MLT1C LTR MaLR 15 465 -2 601 245 119 0 chr20 60359595 60359754 -11794128 + MER45A DNA AcHobo 1 178 0 22 0 0 0 chr20 60360121 60360143 -11793739 + AT_rich Low_complexity Low_complexity 1 22 0 185 94 31 0 chr20 60360494 60360526 -11793356 + (TTCA)n Simple_repeat Simple_repeat 3 35 0 470 316 53 50 chr20 60360663 60360851 -11793031 + L1MC4a LINE L1 5644 5835 -1973 2138 132 36 36 chr20 60360851 60361215 -11792667 - THE1B LTR MaLR 0 364 1 470 316 53 50 chr20 60361215 60361346 -11792536 + L1MC4a LINE L1 5835 5964 -1844 23 33 0 0 chr20 60361544 60361574 -11792308 + AT_rich Low_complexity Low_complexity 1 30 0 1445 287 43 31 chr20 60361966 60362578 -11791304 - MLT1G LTR MaLR -2 588 1 348 285 64 55 chr20 60362578 60362756 -11791126 - MIR SINE MIR -65 143 2 396 307 126 20 chr20 60363830 60364179 -11789703 - L1ME4a LINE L1 -103 6018 5633 794 41 41 0 chr20 60364282 60364404 -11789478 + (TTTC)n Simple_repeat Simple_repeat 1 127 0 1163 224 78 16 chr20 60364498 60364819 -11789063 + MER58B DNA MER1_type 1 341 0 402 328 67 32 chr20 60364876 60365129 -11788753 + MIR SINE MIR 1 262 0 2027 170 3 0 chr20 60365688 60366047 -11787835 - MER47A DNA MER2_type 0 366 7 322 257 59 40 chr20 60366417 60366518 -11787364 + L2 LINE L2 3121 3223 -49 341 318 133 55 chr20 60366586 60367008 -11786874 + L2 LINE L2 2818 3272 0 2231 119 0 0 chr20 60367013 60367307 -11786575 + AluSx SINE Alu 1 294 -18 2130 118 29 47 chr20 60367384 60367766 -11786116 - THE1C LTR MaLR 0 375 1 1167 292 34 48 chr20 60367878 60368498 -11785384 + L1MC4a LINE L1 5338 5948 -1860 214 241 12 12 chr20 60368687 60368770 -11785112 + GA-rich Low_complexity Low_complexity 1 83 0 21 57 0 0 chr20 60369217 60369252 -11784630 + AT_rich Low_complexity Low_complexity 1 35 0 232 88 0 0 chr20 60370006 60370040 -11783842 + Alu SINE Alu 93 126 -174 324 211 10 19 chr20 60370040 60370144 -11783738 + (TA)n Simple_repeat Simple_repeat 2 104 0 721 244 29 29 chr20 60370242 60370451 -11783431 - MER3 DNA MER1_type 0 209 1 318 289 0 21 chr20 60370463 60370560 -11783322 + MER5A DNA MER1_type 5 99 -90 1100 226 9 0 chr20 60370602 60370823 -11783059 - MER58A DNA MER1_type -1 223 1 1991 140 3 34 chr20 60371050 60371372 -11782510 + AluSx SINE Alu 1 312 0 556 306 39 10 chr20 60372169 60372375 -11781507 + MIR SINE MIR 37 248 -14 411 304 28 33 chr20 60372371 60372552 -11781330 - MIR SINE MIR -49 213 34 * 237 256 56 0 chr20 60373017 60373107 -11780775 + L1ME LINE L1 5583 5677 -444 1611 170 9 52 chr20 60373127 60373451 -11780431 + AluJo SINE Alu 1 310 -2 487 287 103 84 chr20 60373868 60374381 -11779501 + L2 LINE L2 2776 3313 0 24 67 0 0 chr20 60376058 60376103 -11777779 + AT_rich Low_complexity Low_complexity 1 45 0 181 245 0 0 chr20 60376689 60376738 -11777144 + MIR SINE MIR 166 214 -48 325 310 52 0 chr20 60376824 60376940 -11776942 + L2 LINE L2 3192 3313 0 246 291 174 0 chr20 60377316 60377402 -11776480 + L2 LINE L2 3169 3269 -3 261 335 14 47 chr20 60377427 60377567 -11776315 + MIR SINE MIR 1 136 -72 366 23 0 0 chr20 60377575 60377618 -11776264 + (TC)n Simple_repeat Simple_repeat 1 43 0 940 141 18 18 chr20 60377624 60377787 -11776095 + MSTD LTR MaLR 234 396 0 395 264 94 0 chr20 60377875 60377981 -11775901 - MER63A DNA MER1_type -6 204 89 723 212 88 0 chr20 60377989 60378159 -11775723 - MER58A DNA MER1_type -5 219 35 373 209 47 0 chr20 60378184 60378270 -11775612 - MER63A DNA MER1_type 0 92 3 2176 113 3 0 chr20 60378368 60378668 -11775214 + AluSx SINE Alu 1 301 -11 1246 122 0 6 chr20 60378668 60378840 -11775042 + AluSp SINE Alu 134 304 -9 519 244 0 8 chr20 60378865 60378988 -11774894 + LTR16A LTR ERVL 236 357 -93 862 292 31 25 chr20 60378988 60379313 -11774569 + HERV16 LTR ERVL 733 1059 -3937 783 301 54 0 chr20 60379980 60380239 -11773643 + LTR16A LTR ERVL 178 450 0 474 205 130 25 chr20 60380360 60380521 -11773361 - MIR SINE MIR 0 262 85 310 355 65 0 chr20 60381066 60381173 -11772709 - L2 LINE L2 -8 3264 3151 502 289 84 36 chr20 60381534 60381783 -11772099 + MIR SINE MIR 2 262 0 204 311 74 54 chr20 60381811 60381959 -11771923 - L2 LINE L2 -179 3093 2943 769 294 41 44 chr20 60382179 60382256 -11771626 + MLT1K LTR MaLR 212 288 -300 1386 191 97 91 chr20 60382256 60382718 -11771164 - MLT1C LTR MaLR -2 465 1 769 294 41 44 chr20 60382718 60383007 -11770875 + MLT1K LTR MaLR 288 577 -11 27 0 0 0 chr20 60383036 60383063 -11770819 + AT_rich Low_complexity Low_complexity 1 27 0 22 0 0 0 chr20 60383556 60383578 -11770304 + AT_rich Low_complexity Low_complexity 1 22 0 290 341 56 0 chr20 60385198 60385324 -11768558 + L2 LINE L2 2889 3021 -251 427 288 56 19 chr20 60385513 60385673 -11768209 - MIR SINE MIR -63 199 34 2561 64 0 16 chr20 60385892 60386204 -11767678 + AluY SINE Alu 1 307 -4 654 291 152 19 chr20 60386705 60387066 -11766816 + L2 LINE L2 2890 3298 -15 670 294 52 0 chr20 60388073 60388284 -11765598 - MIR SINE MIR -39 223 2 358 198 0 12 chr20 60388306 60388387 -11765495 + MER116 DNA Mariner 1 80 0 447 294 96 58 chr20 60389296 60389428 -11764454 + L2 LINE L2 2599 2724 -590 2235 123 0 0 chr20 60389428 60389730 -11764152 - AluSx SINE Alu -10 302 1 447 294 96 58 chr20 60389730 60389961 -11763921 + L2 LINE L2 2724 2976 -338 256 317 92 42 chr20 60390020 60390162 -11763720 + L2 LINE L2 3164 3312 -1 2246 93 33 0 chr20 60390985 60391285 -11762597 - AluSx SINE Alu -2 310 1 1623 187 32 6 chr20 60391699 60392014 -11761868 - MLT1A1 LTR MaLR -42 323 1 482 352 102 35 chr20 60392038 60392461 -11761421 - L2 LINE L2 -4 3309 2859 240 327 103 0 chr20 60392807 60392914 -11760968 - L2 LINE L2 -4 3309 3192 987 191 11 5 chr20 60392917 60393105 -11760777 + MER5A DNA MER1_type 1 189 0 2073 146 3 0 chr20 60393844 60394139 -11759743 - AluSx SINE Alu -16 296 1 840 78 0 61 chr20 60394210 60394325 -11759557 - AluSq SINE Alu -127 186 79 2215 130 0 0 chr20 60394394 60394687 -11759195 + AluSc SINE Alu 1 293 -16 618 228 7 0 chr20 60394780 60394916 -11758966 + MER58B DNA MER1_type 199 335 -6 2279 90 6 26 chr20 60395022 60395333 -11758549 + AluSc SINE Alu 1 305 -4 1179 175 126 71 chr20 60395593 60395918 -11757964 + MER2 DNA MER2_type 2 344 0 1344 30 0 12 chr20 60396430 60396597 -11757285 + L1PA8 LINE L1 6003 6167 -5 254 242 15 30 chr20 60396683 60396749 -11757133 - L2 LINE L2 0 3313 3249 * 307 270 0 0 chr20 60396747 60396810 -11757072 + MIR3 SINE MIR 117 179 -29 814 288 23 9 chr20 60396845 60397060 -11756822 + MIR SINE MIR 45 262 0 22 0 0 0 chr20 60397074 60397096 -11756786 + AT_rich Low_complexity Low_complexity 1 22 0 449 251 164 32 chr20 60397355 60397574 -11756308 - MIR SINE MIR -12 250 3 1049 96 198 0 chr20 60398965 60399122 -11754760 - MER5A DNA MER1_type 0 189 2 233 343 45 8 chr20 60401885 60402019 -11751863 - L2 LINE L2 -2 3311 3173 1115 161 21 93 chr20 60402050 60402286 -11751596 + MER20 DNA MER1_type 1 219 0 428 301 89 44 chr20 60403410 60403553 -11750329 + MIR SINE MIR 20 176 -86 243 0 0 0 chr20 60403553 60403580 -11750302 + (TG)n Simple_repeat Simple_repeat 1 27 0 428 301 89 44 chr20 60403580 60403639 -11750243 + MIR SINE MIR 176 231 -31 200 328 88 0 chr20 60403875 60404000 -11749882 + MIR SINE MIR 49 184 -78 386 276 27 15 chr20 60404065 60404312 -11749570 + MLT1I LTR MaLR 102 397 -12 811 167 8 0 chr20 60405121 60405247 -11748635 - MER58A DNA MER1_type 0 156 30 2346 90 3 0 chr20 60405354 60405664 -11748218 - AluY SINE Alu 0 311 1 653 258 114 49 chr20 60405978 60406284 -11747598 - MLT1J LTR MaLR -179 332 7 444 315 81 0 chr20 60406288 60406437 -11747445 + MIR SINE MIR 5 165 -97 307 235 12 24 chr20 60407186 60407271 -11746611 + MIR SINE MIR 173 256 -6 225 0 0 0 chr20 60408066 60408091 -11745791 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 1675 171 0 18 chr20 60408097 60408377 -11745505 - AluJo SINE Alu -36 276 2 333 264 16 16 chr20 60408737 60408858 -11745024 + (TA)n Simple_repeat Simple_repeat 2 125 -5 2856 141 2 29 chr20 60408858 60409304 -11744578 - Tigger2a DNA MER2_type 0 434 1 333 264 16 16 chr20 60409304 60409311 -11744571 + (TA)n Simple_repeat Simple_repeat 124 130 0 2594 194 76 4 chr20 60409736 60409770 -11744112 - MLT2B1 LTR ERVL -9 511 481 493 15 30 0 chr20 60409770 60409836 -11744046 + (TAGA)n Simple_repeat Simple_repeat 1 68 0 2594 194 76 4 chr20 60409836 60410276 -11743606 - MLT2B1 LTR ERVL -39 481 3 21 0 0 0 chr20 60411297 60411318 -11742564 + AT_rich Low_complexity Low_complexity 1 21 0 683 265 0 80 chr20 60411331 60411408 -11742474 + MLT1K LTR MaLR 294 376 -212 846 112 84 34 chr20 60411408 60411586 -11742296 - MER53 DNA DNA 0 189 3 683 265 0 80 chr20 60411586 60411708 -11742174 + MLT1K LTR MaLR 376 477 -111 255 125 0 0 chr20 60411742 60411782 -11742100 + (CA)n Simple_repeat Simple_repeat 1 40 0 46 62 0 0 chr20 60412102 60412183 -11741699 + AT_rich Low_complexity Low_complexity 1 81 0 225 190 0 69 chr20 60412407 60412465 -11741417 - LTR67 LTR ERVL -2 555 502 393 179 13 13 chr20 60412922 60413000 -11740882 + LTR50 LTR ERVL 1 78 -717 25 65 0 0 chr20 60413252 60413298 -11740584 + AT_rich Low_complexity Low_complexity 1 46 0 532 271 45 0 chr20 60413477 60413632 -11740250 + MIR SINE MIR 31 192 -70 234 241 0 0 chr20 60414158 60414216 -11739666 + (TTCA)n Simple_repeat Simple_repeat 1 58 0 610 310 29 29 chr20 60414349 60414591 -11739291 - MIR SINE MIR -7 255 14 303 304 72 48 chr20 60414856 60415063 -11738819 - MLT1K LTR MaLR -3 585 374 282 193 0 0 chr20 60416341 60416398 -11737484 + (TG)n Simple_repeat Simple_repeat 1 57 0 249 119 0 0 chr20 60416397 60416439 -11737443 + (GA)n Simple_repeat Simple_repeat 1 42 0 * 2844 82 30 11 chr20 60416653 60417021 -11736861 - THE1C LTR MaLR 0 375 1 21 36 0 0 chr20 60417113 60417141 -11736741 + AT_rich Low_complexity Low_complexity 1 28 0 1150 213 18 5 chr20 60417737 60417958 -11735924 + MER58A DNA MER1_type 1 224 0 26 30 0 0 chr20 60417980 60418013 -11735869 + AT_rich Low_complexity Low_complexity 1 33 0 707 241 102 84 chr20 60418140 60418543 -11735339 - MLT1L LTR MaLR 0 615 206 182 311 27 0 chr20 60418554 60418628 -11735254 + L2 LINE L2 3231 3306 -7 182 281 16 31 chr20 60418751 60418815 -11735067 - MIR3 SINE MIR -45 163 101 401 295 119 24 chr20 60418838 60419048 -11734834 + MLT1K LTR MaLR 16 245 -343 260 254 289 18 chr20 60419083 60419197 -11734685 + MLT1K LTR MaLR 331 475 -113 235 328 107 8 chr20 60419214 60419345 -11734537 - MLT1L LTR MaLR -24 591 448 308 256 136 42 chr20 60419470 60419661 -11734221 - MLT1K LTR MaLR -377 211 3 297 297 10 10 chr20 60419662 60419763 -11734119 + MLT1K LTR MaLR 472 572 -16 450 268 93 27 chr20 60419854 60420037 -11733845 + L2 LINE L2 3105 3299 -14 186 103 0 0 chr20 60420038 60420067 -11733815 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 194 189 108 95 chr20 60420082 60420156 -11733726 - MIR3 SINE MIR -18 190 116 1846 116 119 0 chr20 60421094 60421371 -11732511 + AluSx SINE Alu 1 310 -2 612 206 54 103 chr20 60421398 60421455 -11732427 + MIR SINE MIR 53 111 -151 709 205 111 6 chr20 60421455 60421483 -11732399 + MER5A DNA MER1_type 1 25 -164 234 0 0 0 chr20 60421483 60421509 -11732373 + (CAG)n Simple_repeat Simple_repeat 1 26 0 709 205 111 6 chr20 60421509 60421651 -11732231 + MER5A DNA MER1_type 25 189 0 612 206 54 103 chr20 60421651 60421797 -11732085 + MIR SINE MIR 111 246 -16 485 296 61 35 chr20 60421931 60422161 -11731721 - MIR SINE MIR 0 262 27 22 35 0 0 chr20 60422364 60422393 -11731489 + AT_rich Low_complexity Low_complexity 1 29 0 264 224 199 83 chr20 60423905 60423965 -11729917 + MER5A DNA MER1_type 9 61 -128 2437 65 0 3 chr20 60423965 60424259 -11729623 + AluSg SINE Alu 1 293 -17 264 224 199 83 chr20 60424259 60424354 -11729528 + MER5A DNA MER1_type 61 182 -7 967 198 35 5 chr20 60424370 60424567 -11729315 - MER20 DNA MER1_type -2 217 15 579 282 41 6 chr20 60424573 60424743 -11729139 + MER5A DNA MER1_type 9 184 -5 890 232 46 42 chr20 60424854 60425027 -11728855 + MIR SINE MIR 3 179 -83 1897 162 3 10 chr20 60425027 60425335 -11728547 + AluSx SINE Alu 1 306 -6 890 232 46 42 chr20 60425335 60425420 -11728462 + MIR SINE MIR 179 262 0 265 250 116 71 chr20 60425442 60425554 -11728328 + L2 LINE L2 3180 3296 -17 489 318 67 6 chr20 60425835 60426014 -11727868 - MIR SINE MIR -3 259 70 324 391 9 0 chr20 60426442 60426557 -11727325 - L2 LINE L2 -7 3265 3150 1434 244 7 0 chr20 60426659 60426962 -11726920 + LTR16C LTR ERVL 186 490 -1 225 298 48 10 chr20 60428030 60428134 -11725748 + L2 LINE L2 3005 3112 -160 799 187 72 0 chr20 60428363 60428529 -11725353 - MER5B DNA MER1_type 0 178 1 443 288 122 13 chr20 60428529 60428758 -11725124 - L1ME3A LINE L1 -7 6163 5910 226 341 35 0 chr20 60428798 60428883 -11724999 - L2 LINE L2 -230 3083 2996 1476 187 31 0 chr20 60428992 60429286 -11724596 + AluJo SINE Alu 6 308 -4 249 293 0 0 chr20 60429650 60429708 -11724174 + L2 LINE L2 3248 3305 -8 426 219 53 66 chr20 60429930 60430081 -11723801 - MER5B DNA MER1_type -29 149 1 293 267 91 30 chr20 60430252 60430484 -11723398 + MER113 DNA MER1_type? 1 246 -275 5943 74 8 13 chr20 60430484 60431277 -11722605 - L1PA8 LINE L1 -6 6166 5378 884 193 106 9 chr20 60431277 60431495 -11722387 + MER113 DNA MER1_type? 219 457 -64 209 341 24 24 chr20 60431913 60431998 -11721884 + L2 LINE L2 3185 3269 -3 319 196 29 162 chr20 60432816 60432930 -11720952 - MER5A DNA MER1_type -5 184 99 837 212 185 0 chr20 60432930 60433114 -11720768 + MER20 DNA MER1_type 2 219 0 319 196 29 162 chr20 60433114 60433172 -11720710 - MER5A DNA MER1_type -90 99 35 3787 124 14 15 chr20 60433358 60433426 -11720456 + L1PB3 LINE L1 4834 4901 -1253 2098 165 21 12 chr20 60433426 60433760 -11720122 - MER1B DNA MER1_type 0 337 1 3787 124 14 15 chr20 60433760 60434647 -11719235 + L1PB3 LINE L1 4901 5789 -365 231 222 0 0 chr20 60434649 60434694 -11719188 + (TATATG)n Simple_repeat Simple_repeat 2 46 0 2763 108 5 3 chr20 60434701 60435073 -11718809 + L1PB3 LINE L1 5782 6154 0 370 271 16 41 chr20 60435135 60435257 -11718625 + L2 LINE L2 3142 3260 -12 503 271 125 39 chr20 60435398 60435624 -11718258 - L2 LINE L2 -1 3312 3056 216 0 0 0 chr20 60435624 60435648 -11718234 + (TG)n Simple_repeat Simple_repeat 2 25 0 503 271 125 39 chr20 60435648 60435701 -11718181 - L2 LINE L2 -257 3056 3009 258 301 133 18 chr20 60435724 60435837 -11718045 + L2 LINE L2 3183 3308 -5 250 281 0 0 chr20 60436161 60436225 -11717657 + CT-rich Low_complexity Low_complexity 2 65 0 28 0 0 0 chr20 60436298 60436326 -11717556 + GC_rich Low_complexity Low_complexity 1 28 0 545 183 7 0 chr20 60436506 60436659 -11717223 + (TG)n Simple_repeat Simple_repeat 1 154 0 557 124 10 0 chr20 60436796 60436893 -11716989 + (GGA)n Simple_repeat Simple_repeat 2 99 0 185 169 17 0 chr20 60437046 60437105 -11716777 + A-rich Low_complexity Low_complexity 1 60 0 21 0 0 0 chr20 60438999 60439020 -11714862 + AT_rich Low_complexity Low_complexity 1 21 0 243 79 0 0 chr20 60439603 60439641 -11714241 + (TG)n Simple_repeat Simple_repeat 2 39 0 438 20 0 0 chr20 60441522 60441573 -11712309 + (CA)n Simple_repeat Simple_repeat 2 52 0 21 0 0 0 chr20 60443049 60443070 -11710812 + AT_rich Low_complexity Low_complexity 1 21 0 220 345 12 12 chr20 60445267 60445351 -11708531 + MIR SINE MIR 17 100 -108 415 298 14 28 chr20 60445375 60445516 -11708366 + MIR SINE MIR 16 154 -108 385 317 57 43 chr20 60445950 60446250 -11707632 - L2 LINE L2 0 3313 3010 211 288 144 38 chr20 60446252 60446384 -11707498 - MIR3 SINE MIR -37 171 26 1124 268 42 21 chr20 60446630 60447014 -11706868 - L2 LINE L2 0 3313 2922 417 311 108 7 chr20 60447226 60447429 -11706453 + MIR SINE MIR 11 228 -34 317 296 128 39 chr20 60448294 60448700 -11705182 - L2 LINE L2 -35 3278 2837 464 299 34 44 chr20 60449260 60449464 -11704418 + MIR SINE MIR 20 221 -41 588 245 40 0 chr20 60449537 60449688 -11704194 + MIR SINE MIR 96 252 -10 276 215 114 13 chr20 60449741 60449820 -11704062 + L2 LINE L2 3227 3313 0 729 240 84 50 chr20 60450017 60450210 -11703672 - MER113 DNA MER1_type? -74 447 262 2209 87 6 44 chr20 60450210 60450531 -11703351 + AluSg SINE Alu 1 309 -1 729 240 84 50 chr20 60450531 60450548 -11703334 - MER113 DNA MER1_type? -259 262 247 2205 105 3 0 chr20 60450548 60450842 -11703040 + AluSx SINE Alu 1 295 -17 729 240 84 50 chr20 60450842 60450989 -11702893 - MER113 DNA MER1_type? -274 247 77 274 61 41 0 chr20 60450993 60451042 -11702840 + (TG)n Simple_repeat Simple_repeat 2 52 0 378 250 31 86 chr20 60451325 60451453 -11702429 - MER5A DNA MER1_type -1 188 68 641 58 39 0 chr20 60451545 60451648 -11702234 + (TC)n Simple_repeat Simple_repeat 1 107 0 277 335 145 18 chr20 60452327 60452554 -11701328 - MIR SINE MIR -5 257 2 527 269 54 12 chr20 60453621 60453788 -11700094 + MIR SINE MIR 89 262 0 285 267 11 42 chr20 60454038 60454214 -11699668 - L1ME LINE L1 -299 5822 5687 180 0 0 0 chr20 60454551 60454571 -11699311 + (GGGTG)n Simple_repeat Simple_repeat 3 22 0 203 233 56 11 chr20 60455095 60455185 -11698697 + (TG)n Simple_repeat Simple_repeat 1 94 0 222 62 0 0 chr20 60456342 60456374 -11697508 + (TGAA)n Simple_repeat Simple_repeat 1 32 0 235 319 84 42 chr20 60458211 60458330 -11695552 - L2 LINE L2 -1 3271 3148 187 227 0 0 chr20 60458352 60458396 -11695486 + L2 LINE L2 3229 3272 0 1002 146 0 0 chr20 60458414 60458585 -11695297 + (TGGA)n Simple_repeat Simple_repeat 4 174 0 505 320 59 23 chr20 60458946 60459165 -11694717 - MIR SINE MIR -7 255 29 321 231 103 26 chr20 60459405 60459522 -11694360 - MLT1K LTR MaLR -264 324 199 282 284 37 67 chr20 60459639 60459701 -11694181 + MIR SINE MIR 11 73 -189 2286 109 0 28 chr20 60459701 60460022 -11693860 - AluSx SINE Alu 0 312 1 282 284 37 67 chr20 60460022 60460093 -11693789 + MIR SINE MIR 73 140 -122 414 0 0 0 chr20 60460408 60460454 -11693428 + (TTTA)n Simple_repeat Simple_repeat 3 48 0 567 176 20 0 chr20 60462001 60462103 -11691779 + MER5A DNA MER1_type 9 112 -77 2069 125 3 10 chr20 60462271 60462568 -11691314 - AluSx SINE Alu -17 295 1 415 295 92 52 chr20 60462600 60462905 -11690977 + L2 LINE L2 2997 3313 0 219 287 213 21 chr20 60463327 60463515 -11690367 - L2 LINE L2 -13 3300 3077 367 271 58 58 chr20 60463773 60463928 -11689954 + MER5B DNA MER1_type 17 171 -7 181 188 0 125 chr20 60463951 60463971 -11689911 - MIR SINE MIR 0 262 221 182 179 0 0 chr20 60463971 60463999 -11689883 - L2 LINE L2 -20 3252 3225 646 218 49 39 chr20 60464239 60464460 -11689422 + MER58 DNA MER1_type 1 2420 0 227 267 33 0 chr20 60464645 60464735 -11689147 - MER113 DNA MER1_type? -407 114 22 504 72 0 0 chr20 60465287 60465356 -11688526 + (TG)n Simple_repeat Simple_repeat 2 70 0 362 282 120 37 chr20 60466200 60466416 -11687466 - MIR SINE MIR -13 249 16 194 322 61 26 chr20 60466507 60466622 -11687260 - MIR SINE MIR -60 202 84 44 20 0 0 chr20 60466702 60466753 -11687129 + AT_rich Low_complexity Low_complexity 1 51 0 309 119 99 50 chr20 60466753 60466854 -11687028 + MER53 DNA DNA 9 114 -75 369 0 0 0 chr20 60467356 60467397 -11686485 + (TG)n Simple_repeat Simple_repeat 1 41 0 235 156 47 0 chr20 60467957 60468021 -11685861 + CT-rich Low_complexity Low_complexity 1 67 0 503 247 175 0 chr20 60468890 60469056 -11684826 - MIR SINE MIR 0 262 68 1970 106 11 14 chr20 60469131 60469444 -11684438 + AluSg SINE Alu 1 312 0 260 347 8 25 chr20 60469466 60469587 -11684295 - MIR3 SINE MIR -6 202 84 345 336 14 0 chr20 60470592 60470738 -11683144 - Charlie8 DNA MER1_type -2141 276 129 236 228 279 0 chr20 60471047 60471126 -11682756 - L2 LINE L2 -13 3300 3200 446 322 44 44 chr20 60471193 60471466 -11682416 - L2 LINE L2 -193 3079 2807 599 216 6 0 chr20 60471700 60471862 -11682020 + (TG)n Simple_repeat Simple_repeat 2 164 0 30 0 0 0 chr20 60471956 60471986 -11681896 + AT_rich Low_complexity Low_complexity 1 30 0 1479 161 44 54 chr20 60472866 60473073 -11680809 - Tigger7 DNA MER2_type -10 2577 2370 470 17 17 0 chr20 60473073 60473132 -11680750 + (TC)n Simple_repeat Simple_repeat 1 60 0 1479 161 44 54 chr20 60473132 60473147 -11680735 - Tigger7 DNA MER2_type -217 2370 2356 1690 170 6 44 chr20 60473147 60473464 -11680418 + AluJb SINE Alu 1 305 -7 1479 161 44 54 chr20 60473464 60473557 -11680325 - Tigger7 DNA MER2_type -231 2356 2264 1177 167 0 0 chr20 60473546 60473720 -11680162 - Tigger7 DNA MER2_type -2313 174 1 * 218 236 42 56 chr20 60474276 60474348 -11679534 + MER5A DNA MER1_type 114 184 -5 186 43 0 0 chr20 60474678 60474701 -11679181 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 28 29 0 0 chr20 60474915 60474950 -11678932 + AT_rich Low_complexity Low_complexity 1 35 0 209 239 0 0 chr20 60475310 60475356 -11678526 + MER91 DNA MER1_type 1 46 -144 556 265 74 0 chr20 60476020 60476182 -11677700 - MIR SINE MIR -83 179 6 484 257 182 0 chr20 60476464 60476612 -11677270 + MER5A DNA MER1_type 9 183 -6 240 214 0 0 chr20 60476761 60476817 -11677065 + (CA)n Simple_repeat Simple_repeat 1 56 0 202 300 0 0 chr20 60477746 60477796 -11676086 + L2 LINE L2 3176 3225 -47 374 298 0 8 chr20 60477943 60478064 -11675818 - L2 LINE L2 0 3313 3194 1395 206 60 84 chr20 60478113 60478496 -11675386 - MLT1A2 LTR MaLR 0 374 1 195 316 68 34 chr20 60478546 60478663 -11675219 - L2 LINE L2 -4 3268 3148 292 313 150 48 chr20 60479147 60479416 -11674466 + L2 LINE L2 2881 3204 -109 837 176 131 40 chr20 60479416 60479615 -11674267 + MER20 DNA MER1_type 1 217 -2 292 313 150 48 chr20 60479615 60479738 -11674144 + L2 LINE L2 3204 3313 0 22 0 0 0 chr20 60480043 60480065 -11673817 + AT_rich Low_complexity Low_complexity 1 22 0 490 193 32 79 chr20 60480789 60480915 -11672967 - MLT1I LTR MaLR 0 424 312 352 200 53 27 chr20 60480951 60481026 -11672856 - MLT1J2 LTR MaLR -29 421 345 458 309 72 18 chr20 60481195 60481418 -11672464 - MIR SINE MIR -3 259 25 318 287 51 75 chr20 60482117 60482531 -11671351 - MLT1K LTR MaLR -10 578 124 292 306 45 0 chr20 60483378 60483489 -11670393 + Charlie8 DNA MER1_type 101 216 -2201 424 313 25 45 chr20 60483754 60483955 -11669927 + MIR SINE MIR 66 262 0 2104 126 60 35 chr20 60483962 60484328 -11669554 - THE1C LTR MaLR 0 375 1 697 268 98 5 chr20 60484945 60485169 -11668713 + MIR SINE MIR 18 262 0 825 192 19 0 chr20 60485368 60485524 -11668358 + MER5A DNA MER1_type 31 189 0 188 33 0 33 chr20 60487714 60487744 -11666138 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 3978 67 0 2 chr20 60488598 60489077 -11664805 - L1PA7 LINE L1 -2 6152 5675 369 217 33 65 chr20 60489086 60489270 -11664612 - Charlie7 DNA MER1_type -44 2568 2391 520 236 33 33 chr20 60489352 60489534 -11664348 - Charlie7 DNA MER1_type -258 2354 2173 439 301 56 44 chr20 60489540 60489879 -11664003 - Charlie7 DNA MER1_type -2249 363 21 1107 163 5 5 chr20 60490450 60490634 -11663248 - AluJb SINE Alu -9 303 120 646 201 0 107 chr20 60490957 60491106 -11662776 + AluJo SINE Alu 2 134 -178 357 269 8 37 chr20 60491167 60491301 -11662581 - L1ME LINE L1 -376 5745 5616 314 286 0 11 chr20 60491344 60491435 -11662447 + (TA)n Simple_repeat Simple_repeat 2 91 0 763 154 8 8 chr20 60491757 60491874 -11662008 + FRAM SINE Alu 45 161 -15 245 250 0 0 chr20 60492912 60492964 -11660918 - Charlie8 DNA MER1_type -1002 1415 1364 2218 111 0 0 chr20 60493494 60493782 -11660100 + AluSx SINE Alu 1 288 -24 611 278 117 26 chr20 60494110 60494340 -11659542 - MIR SINE MIR -10 252 2 837 239 147 51 chr20 60494767 60495298 -11658584 - L1ME4a LINE L1 -2 6119 5538 459 185 0 0 chr20 60495997 60496089 -11657793 + GA-rich Low_complexity Low_complexity 1 92 0 586 319 39 17 chr20 60496886 60497118 -11656764 + MIR SINE MIR 7 243 -19 539 286 53 5 chr20 60497517 60497706 -11656176 + MIR SINE MIR 64 261 -1 2052 149 0 0 chr20 60497752 60498060 -11655822 - AluSx SINE Alu -4 308 1 251 340 0 0 chr20 60498085 60498182 -11655700 + L2 LINE L2 3217 3313 0 513 255 60 13 chr20 60498272 60498421 -11655461 + MIR SINE MIR 22 177 -85 821 310 126 9 chr20 60498497 60499227 -11654655 - L2 LINE L2 -18 3295 2475 22 0 0 0 chr20 60499654 60499676 -11654206 + AT_rich Low_complexity Low_complexity 1 22 0 298 298 175 0 chr20 60499712 60499826 -11654056 - L2 LINE L2 0 3272 3139 211 244 0 0 chr20 60500370 60500411 -11653471 - L2 LINE L2 -13 3259 3219 229 213 0 0 chr20 60500518 60500565 -11653317 - L1MC4 LINE L1 -1349 6693 6647 194 193 18 0 chr20 60500581 60500638 -11653244 + (CATATA)n Simple_repeat Simple_repeat 6 63 0 300 118 67 22 chr20 60500746 60500881 -11653001 + (TA)n Simple_repeat Simple_repeat 2 142 0 1002 48 0 8 chr20 60502197 60502323 -11651559 + AluSg/x SINE Alu 188 312 0 1800 81 47 0 chr20 60502957 60503246 -11650636 - AluSp SINE Alu 0 340 41 490 227 0 10 chr20 60503551 60503648 -11650234 - L2 LINE L2 -8 3305 3210 1416 118 0 5 chr20 60503687 60503882 -11650000 + AluSg/x SINE Alu 91 284 -28 306 0 0 0 chr20 60503882 60503916 -11649966 + (CA)n Simple_repeat Simple_repeat 2 35 0 2155 113 0 0 chr20 60503926 60504217 -11649665 + AluSc SINE Alu 1 291 -18 467 271 152 9 chr20 60504282 60504577 -11649305 - L2 LINE L2 -260 3053 2718 366 256 184 36 chr20 60505216 60505466 -11648416 - MLT1K LTR MaLR -2 586 300 382 333 22 16 chr20 60505502 60505685 -11648197 - MLT1K LTR MaLR -357 231 48 527 248 76 6 chr20 60505730 60505887 -11647995 - MIR SINE MIR -71 191 24 224 335 93 37 chr20 60506558 60506719 -11647163 - MIR SINE MIR -61 201 32 500 292 111 13 chr20 60506873 60507099 -11646783 + L1MC/D LINE L1 5564 5811 -1997 1016 195 33 14 chr20 60507381 60507591 -11646291 + MER20 DNA MER1_type 6 219 0 1160 187 78 0 chr20 60508187 60508406 -11645476 - MER46A DNA MER2_type 0 236 1 1725 154 44 14 chr20 60508806 60509099 -11644783 - AluJo SINE Alu -10 302 1 21 0 0 0 chr20 60509100 60509121 -11644761 + AT_rich Low_complexity Low_complexity 1 21 0 779 277 147 41 chr20 60509125 60509493 -11644389 - MLT1I LTR MaLR -2 407 1 350 342 87 10 chr20 60509527 60509723 -11644159 + MER102a DNA MER1_type 120 330 0 418 261 190 5 chr20 60509729 60509924 -11643958 + MIR SINE MIR 3 233 -29 349 320 0 0 chr20 60510051 60510151 -11643731 + MIR3 SINE MIR 109 208 0 183 42 0 0 chr20 60510737 60510761 -11643121 + (CAAAA)n Simple_repeat Simple_repeat 3 26 0 218 325 86 18 chr20 60510836 60510999 -11642883 + MIR SINE MIR 79 252 -10 385 212 20 30 chr20 60511164 60511263 -11642619 - MER102a DNA MER1_type -138 192 95 1179 292 39 39 chr20 60511318 60511750 -11642132 - MLT1J LTR MaLR -44 467 36 215 357 31 40 chr20 60511929 60512153 -11641729 - MIR SINE MIR -12 250 29 23 0 0 0 chr20 60512998 60513021 -11640861 + AT_rich Low_complexity Low_complexity 1 23 0 336 345 0 0 chr20 60513085 60513201 -11640681 + MIR SINE MIR 101 216 -46 255 368 25 82 chr20 60513310 60513710 -11640172 + L2 LINE L2 2815 3191 -81 222 263 0 18 chr20 60513775 60513832 -11640050 + GA-rich Low_complexity Low_complexity 4 59 0 2148 114 10 0 chr20 60513902 60514192 -11639690 + AluSx SINE Alu 1 293 -19 243 95 0 0 chr20 60514199 60514241 -11639641 + LTR66 LTR ERVL 398 439 -171 241 98 0 0 chr20 60514229 60514270 -11639612 - LTR66 LTR ERVL -171 439 399 * 327 150 0 0 chr20 60514270 60514330 -11639552 + (TA)n Simple_repeat Simple_repeat 1 60 0 372 270 11 0 chr20 60515039 60515128 -11638754 + MER103 DNA DNA 57 146 -20 2095 134 0 0 chr20 60515157 60515448 -11638434 + AluSq SINE Alu 1 291 -22 357 24 0 0 chr20 60515554 60515596 -11638286 + (CA)n Simple_repeat Simple_repeat 1 42 0 1814 178 0 9 chr20 60516067 60516382 -11637500 - L1MB2 LINE L1 -2 6169 5858 1362 163 0 35 chr20 60516382 60516679 -11637203 + MER1B DNA MER1_type 14 339 0 1332 164 19 65 chr20 60516679 60516941 -11636941 - L1MB2 LINE L1 -294 5877 5628 2172 184 20 44 chr20 60516967 60517423 -11636459 - L1MB7 LINE L1 -11 6173 5729 261 139 0 0 chr20 60517658 60517701 -11636181 + (TA)n Simple_repeat Simple_repeat 1 43 0 185 244 0 0 chr20 60518601 60518642 -11635240 - MIR3 SINE MIR -7 201 161 420 261 76 38 chr20 60518731 60518915 -11634967 + MER69 DNA AcHobo 74 264 -962 774 250 52 10 chr20 60518949 60519141 -11634741 - Charlie8 DNA MER1_type -2139 278 79 397 313 55 55 chr20 60519689 60519864 -11634018 + L2 LINE L2 2920 3097 -216 1141 246 0 0 chr20 60519864 60520084 -11633798 + MER58A DNA MER1_type 1 220 -4 397 313 55 55 chr20 60520084 60520218 -11633664 + L2 LINE L2 3096 3229 -84 2641 100 40 3 chr20 60521007 60521358 -11632524 + THE1B LTR MaLR 1 364 0 227 301 68 14 chr20 60521815 60521888 -11631994 - L2 LINE L2 -54 3218 3142 1865 186 12 32 chr20 60522036 60522380 -11631502 - MER1B DNA MER1_type 0 337 1 862 184 101 0 chr20 60522518 60522676 -11631206 - MER45A DNA AcHobo -4 174 1 385 261 112 8 chr20 60526267 60526401 -11627481 + MIR SINE MIR 104 251 -11 4485 135 101 29 chr20 60526616 60527406 -11626476 - Tigger1 DNA MER2_type -1571 847 1 690 155 7 84 chr20 60528620 60528775 -11625107 + FRAM SINE Alu 1 40 0 341 296 20 40 chr20 60529148 60529300 -11624582 + MIR SINE MIR 60 208 -54 274 263 20 61 chr20 60529399 60529498 -11624384 + MIR SINE MIR 80 174 -88 2023 84 42 0 chr20 60530597 60530899 -11622983 - AluSc SINE Alu 0 320 8 1686 186 75 81 chr20 60531877 60532346 -11621536 - MLT1C LTR MaLR 0 467 2 221 224 20 0 chr20 60532752 60532801 -11621081 + L2 LINE L2 3264 3313 0 188 167 21 0 chr20 60533056 60533104 -11620778 + A-rich Low_complexity Low_complexity 2 50 0 432 0 0 0 chr20 60533763 60533811 -11620071 + (CA)n Simple_repeat Simple_repeat 2 49 0 237 108 0 0 chr20 60534741 60534778 -11619104 + (TG)n Simple_repeat Simple_repeat 2 38 0 801 211 27 11 chr20 60536024 60536209 -11617673 + MER20 DNA MER1_type 32 219 0 188 277 36 36 chr20 60536584 60536667 -11617215 + MIR3 SINE MIR 85 167 -41 846 170 0 5 chr20 60536969 60537549 -11616333 + (TCCA)n Simple_repeat Simple_repeat 1 576 0 393 267 85 34 chr20 60537549 60537725 -11616157 + HAL1b LINE L1 1162 1346 -2 287 340 0 38 chr20 60538221 60538327 -11615555 + L2 LINE L2 2985 3086 -186 384 260 137 44 chr20 60538845 60539049 -11614833 - MIR SINE MIR -27 235 13 247 287 49 25 chr20 60539650 60539772 -11614110 - L2 LINE L2 -352 2961 2837 367 288 9 9 chr20 60539792 60539903 -11613979 + MER81 DNA DNA 1 111 -3 427 295 33 0 chr20 60540036 60540158 -11613724 + MIR3 SINE MIR 72 197 -11 342 337 87 6 chr20 60540197 60540369 -11613513 - L2 LINE L2 -571 2743 2558 418 215 262 0 chr20 60540477 60540584 -11613298 - L2 LINE L2 0 3272 3138 180 301 102 78 chr20 60541149 60541231 -11612651 - L2 LINE L2 -999 2315 2236 1978 145 7 0 chr20 60541231 60541528 -11612354 + AluSx SINE Alu 1 299 -13 180 301 102 78 chr20 60541528 60541867 -11612015 - L2 LINE L2 -1078 2236 1884 226 209 0 60 chr20 60542425 60542492 -11611390 - L1ME4a LINE L1 -3 6118 6056 186 250 0 0 chr20 60542495 60542535 -11611347 + L2 LINE L2 3265 3304 -9 769 319 173 22 chr20 60542622 60543471 -11610411 - L2 LINE L2 -552 2762 1786 301 262 60 143 chr20 60543792 60544044 -11609838 - MIR SINE MIR -4 258 28 192 269 58 0 chr20 60544202 60544254 -11609628 + MIR SINE MIR 184 238 -24 2186 135 18 26 chr20 60544560 60544900 -11608982 - MER1B DNA MER1_type 0 337 1 1723 156 10 53 chr20 60545127 60545429 -11608453 - AluJo SINE Alu -23 289 1 462 95 0 0 chr20 60545991 60546054 -11607828 - Alu SINE Alu -7 302 240 278 269 45 0 chr20 60546064 60546131 -11607751 - MIR SINE MIR -108 154 85 421 306 45 15 chr20 60547709 60547843 -11606039 + MIR SINE MIR 51 188 -74 30 27 0 0 chr20 60548086 60548123 -11605759 + AT_rich Low_complexity Low_complexity 1 37 0 768 119 0 0 chr20 60548723 60548841 -11605041 + (TCCC)n Simple_repeat Simple_repeat 4 121 0 277 287 43 11 chr20 60549021 60549115 -11604767 + MIR SINE MIR 71 167 -95 2027 116 3 14 chr20 60549180 60549474 -11604408 + AluSq SINE Alu 2 292 -21 207 100 0 0 chr20 60549474 60549504 -11604378 + (GA)n Simple_repeat Simple_repeat 1 30 0 484 262 213 20 chr20 60549654 60549856 -11604026 - MIR SINE MIR -13 249 9 446 284 79 50 chr20 60550901 60551204 -11602678 - L2 LINE L2 -40 3273 2962 404 316 8 8 chr20 60552299 60552432 -11601450 - L2 LINE L2 -1 3312 3180 213 39 0 0 chr20 60553416 60553442 -11600440 + (T)n Simple_repeat Simple_repeat 1 26 0 474 323 136 25 chr20 60553570 60553923 -11599959 - L2 LINE L2 0 3313 2922 2031 184 38 28 chr20 60553945 60554491 -11599391 - MLT2A2 LTR ERVL 0 554 1 22 35 0 0 chr20 60555027 60555056 -11598826 + AT_rich Low_complexity Low_complexity 1 29 0 1673 188 0 13 chr20 60555860 60556164 -11597718 + AluJo SINE Alu 1 300 -12 897 207 91 0 chr20 60556919 60557117 -11596765 - MER58A DNA MER1_type 0 224 9 333 330 46 9 chr20 60557148 60557366 -11596516 + MIR SINE MIR 29 254 -8 288 250 65 48 chr20 60557410 60557534 -11596348 + L2 LINE L2 2639 2764 -550 258 355 95 21 chr20 60557575 60557764 -11596118 + L2 LINE L2 2846 3048 -265 345 304 0 11 chr20 60557814 60557906 -11595976 + L2 LINE L2 3173 3263 -9 24 0 0 0 chr20 60558089 60558113 -11595769 + AT_rich Low_complexity Low_complexity 1 24 0 1133 233 5 0 chr20 60558114 60558337 -11595545 + MER58A DNA MER1_type 1 224 0 1086 312 92 22 chr20 60559110 60559652 -11594230 - MLT1K LTR MaLR 0 588 9 961 126 117 53 chr20 60559730 60559936 -11593946 - MER20 DNA MER1_type 0 219 1 227 31 31 0 chr20 60560225 60560257 -11593625 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 2120 120 0 3 chr20 60560260 60560543 -11593339 - AluSx SINE Alu -30 282 1 2124 108 10 16 chr20 60560788 60561154 -11592728 + AluSq SINE Alu 1 364 0 806 226 55 17 chr20 60561154 60561335 -11592547 - MER20 DNA MER1_type 0 219 32 1027 85 4 183 chr20 60561840 60562075 -11591807 + 7SK RNA RNA 1 193 0 184 256 0 0 chr20 60562307 60562350 -11591532 + MIR SINE MIR 2 44 -218 192 233 0 0 chr20 60562379 60562422 -11591460 + L2 LINE L2 3264 3306 -7 2213 127 33 28 chr20 60563714 60564076 -11589806 - THE1B LTR MaLR 0 364 1 268 352 9 0 chr20 60564317 60564422 -11589460 - MIR SINE MIR -141 121 16 239 133 22 0 chr20 60566584 60566629 -11587253 + A-rich Low_complexity Low_complexity 1 46 0 * 410 167 12 0 chr20 60566623 60566707 -11587175 + G-rich Low_complexity Low_complexity 3 87 0 561 262 116 43 chr20 60566987 60567058 -11586824 - MER112 DNA MER1_type -6 254 190 895 10 0 0 chr20 60567058 60567160 -11586722 - L1PA2 LINE L1 -1 6154 6053 561 262 116 43 chr20 60567160 60567321 -11586561 - MER112 DNA MER1_type -70 190 5 942 230 25 0 chr20 60569468 60569672 -11584210 - MER20 DNA MER1_type -5 214 6 1826 175 0 13 chr20 60569821 60570136 -11583746 - AluJb SINE Alu -1 311 1 2076 168 61 12 chr20 60570139 60570563 -11583319 - L1MA6 LINE L1 0 6300 5856 2517 57 20 0 chr20 60570580 60570879 -11583003 - AluY SINE Alu 0 311 7 2263 103 7 0 chr20 60570885 60571185 -11582697 - AluSx SINE Alu -10 302 1 589 258 44 39 chr20 60571407 60571589 -11582293 + MIR SINE MIR 3 185 -77 336 305 9 19 chr20 60572234 60572339 -11581543 + MER5A DNA MER1_type 38 141 -37 216 171 0 0 chr20 60573238 60573279 -11580603 + CT-rich Low_complexity Low_complexity 2 42 0 567 83 0 0 chr20 60573558 60573630 -11580252 + AluJ/FLAM SINE Alu 9 80 -232 901 125 54 150 chr20 60573825 60574065 -11579817 + MER20 DNA MER1_type 2 218 -1 853 200 57 19 chr20 60574130 60574340 -11579542 - MER20 DNA MER1_type -1 218 1 1789 152 55 3 chr20 60574763 60575053 -11578829 - AluSx SINE Alu -7 305 1 266 239 0 30 chr20 60575121 60575188 -11578694 + MIR SINE MIR 82 146 -62 2556 46 20 7 chr20 60576189 60576495 -11577387 + AluY SINE Alu 1 310 -1 247 230 0 81 chr20 60577009 60577096 -11576786 + L2 LINE L2 3187 3266 -6 274 262 67 54 chr20 60577232 60577381 -11576501 + MER103 DNA DNA 8 158 -8 2214 57 9 111 chr20 60577389 60577722 -11576160 - AluY SINE Alu -12 299 1 446 327 122 21 chr20 60577782 60578158 -11575724 + L2 LINE L2 2898 3311 -2 636 305 32 20 chr20 60578520 60578766 -11575116 + MIR SINE MIR 14 262 0 259 320 96 16 chr20 60578775 60578900 -11574982 - MIR SINE MIR -59 203 69 1990 145 72 20 chr20 60579457 60579802 -11574080 + THE1B LTR MaLR 1 363 -1 445 321 119 11 chr20 60580026 60580303 -11573579 + L2 LINE L2 3005 3311 -2 302 265 75 54 chr20 60580393 60580540 -11573342 + L3b LINE CR1 1293 1442 -141 2271 122 0 0 chr20 60580573 60580885 -11572997 + AluSx SINE Alu 1 312 0 423 52 0 0 chr20 60580890 60580948 -11572934 + (TG)n Simple_repeat Simple_repeat 2 59 0 549 184 19 0 chr20 60581088 60581191 -11572691 + MER20 DNA MER1_type 110 214 -5 720 236 116 5 chr20 60581481 60581680 -11572202 - MER58A DNA MER1_type -2 222 2 385 197 0 0 chr20 60582458 60582519 -11571363 - AluJ/FLAM SINE Alu -241 61 1 23 24 0 24 chr20 60582684 60582704 -11571178 + AT_rich Low_complexity Low_complexity 1 20 -20 1688 139 77 11 chr20 60582704 60582977 -11570905 - AluJb SINE Alu -1 311 21 23 24 0 24 chr20 60582977 60582997 -11570885 + AT_rich Low_complexity Low_complexity 20 40 0 702 265 26 0 chr20 60583214 60583403 -11570479 - MIR SINE MIR -21 241 48 326 121 61 0 chr20 60583405 60583471 -11570411 - AluJ/FLAM SINE Alu -232 70 1 590 248 171 69 chr20 60583471 60583862 -11570020 + LTR16C LTR ERVL 61 491 0 734 143 0 0 chr20 60584332 60584458 -11569424 + L1MB3 LINE L1 6058 6183 0 180 0 0 0 chr20 60584834 60584854 -11569028 + (GAAA)n Simple_repeat Simple_repeat 1 20 0 442 248 94 60 chr20 60584910 60585003 -11568879 - MIR SINE MIR -10 252 164 1657 212 0 0 chr20 60585003 60585310 -11568572 - AluJo SINE Alu -5 307 1 442 248 94 60 chr20 60585310 60585450 -11568432 - MIR SINE MIR -98 164 11 2045 136 3 0 chr20 60585882 60586177 -11567705 + AluSx SINE Alu 1 296 -16 360 0 0 0 chr20 60586229 60586269 -11567613 + (TAA)n Simple_repeat Simple_repeat 1 40 0 2447 100 0 0 chr20 60586712 60587022 -11566860 + AluSx SINE Alu 3 312 0 204 300 89 11 chr20 60588542 60588632 -11565250 - L2 LINE L2 -25 3247 3151 1105 189 70 9 chr20 60588828 60589055 -11564827 + MER58 DNA MER1_type 1 241 -2179 364 307 159 36 chr20 60589966 60590243 -11563639 + L2 LINE L2 3000 3310 -3 541 315 88 36 chr20 60590378 60590818 -11563064 + L2 LINE L2 2602 3098 -215 1872 149 3 40 chr20 60590818 60591140 -11562742 - AluJo SINE Alu -2 310 1 541 315 88 36 chr20 60591140 60591368 -11562514 + L2 LINE L2 3098 3313 0 1970 152 7 0 chr20 60591590 60591886 -11561996 - AluSx SINE Alu -14 298 1 1688 165 131 3 chr20 60593584 60593912 -11559970 + L1PA16 LINE L1 5788 6157 -9 270 318 133 19 chr20 60594016 60594280 -11559602 + L2 LINE L2 2836 3129 -184 662 82 153 0 chr20 60594281 60594379 -11559503 - THE1B LTR MaLR -251 113 1 273 196 18 0 chr20 60594461 60594517 -11559365 - MER20 DNA MER1_type -15 204 148 319 277 129 0 chr20 60597289 60597390 -11556492 + L2 LINE L2 3200 3313 0 2143 123 3 22 chr20 60597502 60597819 -11556063 - AluSx SINE Alu -1 311 1 284 102 20 0 chr20 60598453 60598502 -11555380 + (TC)n Simple_repeat Simple_repeat 2 51 0 470 335 31 18 chr20 60599423 60599647 -11554235 + MIR SINE MIR 36 262 0 587 322 9 5 chr20 60599720 60599934 -11553948 + MIR SINE MIR 40 254 -8 416 297 40 18 chr20 60599986 60600160 -11553722 + MIR SINE MIR 36 211 -51 289 227 15 0 chr20 60600193 60600259 -11553623 + L2 LINE L2 3242 3308 -5 191 348 45 11 chr20 60600552 60600641 -11553241 + MIR SINE MIR 24 115 -147 341 291 82 8 chr20 60600714 60600848 -11553034 + MIR SINE MIR 113 256 -6 547 199 148 97 chr20 60601259 60601632 -11552250 + LTR16A1 LTR ERVL 86 457 0 1167 231 0 5 chr20 60601650 60601871 -11552011 + MER58A DNA MER1_type 5 224 0 662 320 99 13 chr20 60601883 60602255 -11551627 + L2 LINE L2 2900 3303 -10 2121 114 10 0 chr20 60602257 60602554 -11551328 + AluY SINE Alu 1 300 -11 233 29 29 0 chr20 60602577 60602611 -11551271 + (CAAA)n Simple_repeat Simple_repeat 3 37 0 796 270 158 6 chr20 60603108 60603615 -11550267 + L2 LINE L2 2662 3267 -46 1605 234 15 9 chr20 60603727 60603982 -11549900 + MER58B DNA MER1_type 1 260 -2160 2731 133 18 23 chr20 60603982 60604418 -11549464 + Tigger2a DNA MER2_type 1 434 0 1605 234 15 9 chr20 60604418 60604500 -11549382 + MER58B DNA MER1_type 260 340 -1 192 338 14 0 chr20 60605043 60605114 -11548768 - L2 LINE L2 -245 3068 2997 521 315 101 35 chr20 60605382 60605757 -11548125 + MLT1K LTR MaLR 92 491 -97 200 217 0 0 chr20 60605769 60605815 -11548067 + T-rich Low_complexity Low_complexity 1 46 0 351 186 0 0 chr20 60605815 60605885 -11547997 - MER41A LTR ERV1 -85 469 400 455 261 92 41 chr20 60606398 60606429 -11547453 - MIR SINE MIR -20 242 214 905 207 16 11 chr20 60606429 60606617 -11547265 + MER5A DNA MER1_type 1 189 0 455 261 92 41 chr20 60606617 60606780 -11547102 - MIR SINE MIR -48 214 38 412 283 157 26 chr20 60607042 60607272 -11546610 + MLT1K LTR MaLR 329 588 0 2285 109 3 0 chr20 60607298 60607600 -11546282 - AluSp SINE Alu -8 305 3 204 250 0 33 chr20 60608409 60608469 -11545413 + (CAGAGA)n Simple_repeat Simple_repeat 2 59 0 2124 96 33 0 chr20 60608955 60609249 -11544633 - AluSc SINE Alu 0 303 1 457 317 31 13 chr20 60609479 60609659 -11544223 + L2 LINE L2 2527 2713 -601 2137 119 17 0 chr20 60609659 60609952 -11543930 + AluSq SINE Alu 1 298 -15 457 317 31 13 chr20 60609952 60609998 -11543884 + L2 LINE L2 2713 2757 -557 191 324 127 0 chr20 60610062 60610204 -11543678 + L2 LINE L2 2771 2930 -384 216 259 17 0 chr20 60610404 60610462 -11543420 + L2 LINE L2 3223 3281 -32 2245 115 3 0 chr20 60610938 60611233 -11542649 + AluSg SINE Alu 1 296 -14 229 340 8 40 chr20 60611389 60611639 -11542243 + L2 LINE L2 2820 3061 -252 228 364 46 38 chr20 60611819 60612058 -11541824 - MIR SINE MIR -14 248 8 460 270 26 20 chr20 60612740 60612892 -11540990 + MIR SINE MIR 59 211 -51 250 329 88 12 chr20 60612904 60613074 -11540808 - LTR16C LTR ERVL -223 268 86 23 0 0 0 chr20 60613291 60613314 -11540568 + AT_rich Low_complexity Low_complexity 1 23 0 963 35 6 0 chr20 60613437 60613569 -11540313 - L1HS LINE L1 0 6155 6019 203 217 83 0 chr20 60613574 60613634 -11540248 - MIR SINE MIR -32 230 166 180 0 0 0 chr20 60613641 60613661 -11540221 + (TCC)n Simple_repeat Simple_repeat 2 21 0 * 281 68 23 0 chr20 60613659 60613703 -11540179 + (CAT)n Simple_repeat Simple_repeat 3 47 0 448 270 61 20 chr20 60614197 60614393 -11539489 - MIR SINE MIR -32 230 27 623 307 52 13 chr20 60615251 60615482 -11538400 + MIR SINE MIR 16 255 -7 198 333 114 0 chr20 60615676 60615799 -11538083 + MIR SINE MIR 48 184 -78 1718 165 132 0 chr20 60617821 60618148 -11535734 + L1PA16 LINE L1 5788 6157 -9 270 318 133 19 chr20 60618252 60618516 -11535366 + L2 LINE L2 2836 3129 -184 1673 176 3 99 chr20 60618522 60618760 -11535122 - MER7A DNA MER2_type -2702 336 147 4303 79 39 22 chr20 60618760 60619009 -11534873 + L1PB1 LINE L1 5519 5763 -388 2502 80 0 3 chr20 60619009 60619321 -11534561 + AluY SINE Alu 1 311 0 4303 79 39 22 chr20 60619321 60619693 -11534189 + L1PB1 LINE L1 5763 6150 -1 1673 176 3 99 chr20 60619693 60619828 -11534054 - MER7A DNA MER2_type -2891 147 1 276 225 42 67 chr20 60619837 60619957 -11533925 + L2 LINE L2 3162 3278 -35 252 257 0 0 chr20 60620016 60620086 -11533796 + MIR SINE MIR 80 149 -113 479 285 66 31 chr20 60620443 60620671 -11533211 + MIR SINE MIR 2 237 -25 424 258 62 71 chr20 60622153 60622323 -11531559 - MIR SINE MIR -10 252 83 1868 163 3 10 chr20 60622323 60622623 -11531259 - AluJo SINE Alu -14 298 1 424 258 62 71 chr20 60622623 60622692 -11531190 - MIR SINE MIR -179 83 15 188 325 104 0 chr20 60622831 60622908 -11530974 + MIR SINE MIR 33 117 -91 7534 41 0 0 chr20 60622947 60624172 -11529710 - L1PA5 LINE L1 0 6154 4936 1851 145 14 17 chr20 60624228 60624517 -11529365 - AluJb SINE Alu -14 298 11 589 265 35 12 chr20 60624621 60624791 -11529091 + MIR SINE MIR 58 231 -31 2230 78 0 7 chr20 60624855 60625163 -11528719 + AluY SINE Alu 1 306 0 243 0 0 0 chr20 60626205 60626232 -11527650 + (T)n Simple_repeat Simple_repeat 1 27 0 320 330 20 0 chr20 60626527 60626627 -11527255 + L2 LINE L2 3169 3270 -2 701 212 153 31 chr20 60627208 60627399 -11526483 - L1MD2 LINE L1 -4 6355 6124 279 54 0 0 chr20 60627399 60627436 -11526446 + (TG)n Simple_repeat Simple_repeat 2 38 0 701 212 153 31 chr20 60627436 60627499 -11526383 - L1MD2 LINE L1 -235 6124 6070 330 333 44 6 chr20 60627538 60627697 -11526185 - MIR SINE MIR -13 249 85 1807 128 15 66 chr20 60627772 60627964 -11525918 + L1PA15 LINE L1 5848 6017 -148 1884 144 24 0 chr20 60627964 60628256 -11525626 + AluSx SINE Alu 1 299 -13 1807 128 15 66 chr20 60628256 60628398 -11525484 + L1PA15 LINE L1 6017 6165 0 370 298 89 52 chr20 60628465 60628628 -11525254 - L1ME4a LINE L1 -114 6007 5852 2096 114 41 3 chr20 60628628 60628918 -11524964 - AluSx SINE Alu -11 301 1 370 298 89 52 chr20 60628918 60629123 -11524759 - L1ME4a LINE L1 -269 5852 5625 2052 144 7 0 chr20 60629125 60629430 -11524452 - AluSx SINE Alu -5 307 1 549 192 125 17 chr20 60629494 60629644 -11524238 + FLAM_C SINE Alu 1 163 0 2318 75 4 0 chr20 60629646 60629975 -11523907 + AluY SINE Alu 1 330 0 973 229 33 5 chr20 60629995 60630209 -11523673 + MER58A DNA MER1_type 1 220 -4 2531 41 0 16 chr20 60630209 60630523 -11523359 + L1P3 LINE L1 5423 5731 -423 1279 155 19 5 chr20 60631183 60631396 -11522486 - MER20 DNA MER1_type -1 218 3 2089 100 57 20 chr20 60632208 60632509 -11521373 + AluSx SINE Alu 1 312 0 185 290 72 14 chr20 60632672 60632741 -11521141 + L2 LINE L2 3154 3226 -46 2166 120 3 10 chr20 60633024 60633323 -11520559 - AluSx SINE Alu -12 300 4 222 318 16 24 chr20 60635169 60635295 -11518587 + L2 LINE L2 2809 2933 -339 2468 61 6 13 chr20 60635937 60636250 -11517632 - AluY SINE Alu 0 311 1 258 287 32 0 chr20 60636458 60636552 -11517330 - MIR SINE MIR -64 144 48 2018 129 3 3 chr20 60637302 60637613 -11516269 - AluSx SINE Alu 0 311 1 2204 106 6 10 chr20 60637798 60638110 -11515772 - AluSq SINE Alu 0 313 3 333 254 77 21 chr20 60638134 60638277 -11515605 - MIR SINE MIR -63 145 30 238 368 83 0 chr20 60639889 60640082 -11513800 - MIR SINE MIR -3 259 51 276 233 8 75 chr20 60640570 60640690 -11513192 + MER113 DNA MER1_type? 1 112 -409 225 0 0 0 chr20 60640926 60640951 -11512931 + (CA)n Simple_repeat Simple_repeat 1 25 0 1969 144 0 0 chr20 60641683 60641991 -11511891 - AluJb SINE Alu 0 308 1 194 255 0 0 chr20 60641991 60642038 -11511844 - L2 LINE L2 -22 3250 3204 2059 127 3 0 chr20 60642709 60643032 -11510850 - AluSx SINE Alu 0 324 1 1840 165 0 10 chr20 60643216 60643513 -11510369 - AluJb SINE Alu -18 294 1 372 270 0 0 chr20 60643548 60643637 -11510245 + MER58B DNA MER1_type 253 341 0 853 240 88 20 chr20 60644091 60644341 -11509541 + MLT1H1 LTR MaLR 12 278 -277 332 174 238 52 chr20 60644467 60644619 -11509263 + MLT1H1 LTR MaLR 349 644 -10 597 223 9 0 chr20 60644756 60644868 -11509014 - MER81 DNA DNA -1 113 1 317 338 136 0 chr20 60644885 60645039 -11508843 + L2 LINE L2 2888 3062 -210 321 211 11 22 chr20 60645832 60645922 -11507960 + MER113 DNA MER1_type? 3 91 -430 236 250 0 0 chr20 60645999 60646047 -11507835 + (TG)n Simple_repeat Simple_repeat 2 49 0 5455 133 47 9 chr20 60646169 60646421 -11507461 + L1PA15 LINE L1 5184 5425 -740 180 0 0 0 chr20 60646421 60646441 -11507441 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 5455 133 47 9 chr20 60646441 60647108 -11506774 + L1PA15 LINE L1 5425 6160 -5 549 284 55 6 chr20 60647372 60647555 -11506327 + L2 LINE L2 2459 2650 -664 320 62 0 21 chr20 60648544 60648592 -11505290 + (TTCC)n Simple_repeat Simple_repeat 1 47 0 1956 161 3 3 chr20 60648592 60648896 -11504986 - AluSx SINE Alu -8 304 1 916 197 171 80 chr20 60648948 60649191 -11504691 + MLT1C LTR MaLR 59 349 -118 2168 122 3 0 chr20 60649191 60649487 -11504395 - AluSx SINE Alu -5 307 11 916 197 171 80 chr20 60649487 60649618 -11504264 + MLT1C LTR MaLR 349 467 0 1279 231 142 12 chr20 60649850 60650252 -11503630 + MLT1C LTR MaLR 6 459 -8 412 235 78 72 chr20 60650270 60650311 -11503571 + Charlie8 DNA MER1_type 28 67 -274 1944 153 0 10 chr20 60650311 60650612 -11503270 - AluJo SINE Alu -14 298 1 412 235 78 72 chr20 60650612 60650736 -11503146 + Charlie8 DNA MER1_type 67 194 -147 253 266 18 62 chr20 60650904 60651017 -11502865 - MIR SINE MIR -66 142 35 577 251 154 70 chr20 60651215 60651365 -11502517 + L2 LINE L2 2763 2899 -414 2145 120 0 13 chr20 60651365 60651666 -11502216 - AluSx SINE Alu -15 297 1 577 251 154 70 chr20 60651666 60651807 -11502075 + L2 LINE L2 2899 3027 -286 2013 145 0 10 chr20 60651807 60652111 -11501771 - AluJb SINE Alu -18 294 1 577 251 154 70 chr20 60652111 60652304 -11501578 + L2 LINE L2 3027 3303 -10 1784 136 21 24 chr20 60652480 60652768 -11501114 + AluSx SINE Alu 1 316 0 213 0 0 35 chr20 60652768 60652797 -11501085 + (CAAA)n Simple_repeat Simple_repeat 1 180 0 2427 66 20 3 chr20 60653220 60653521 -11500361 + AluY SINE Alu 1 306 -5 2171 121 0 25 chr20 60653663 60653977 -11499905 - AluSx SINE Alu -6 306 1 246 341 130 18 chr20 60654051 60654274 -11499608 + MIR SINE MIR 15 262 0 206 336 95 7 chr20 60654454 60654591 -11499291 - MIR SINE MIR -70 192 44 259 303 151 34 chr20 60656976 60657214 -11496668 + L2 LINE L2 3048 3313 0 887 199 7 0 chr20 60657277 60657423 -11496459 - AluJb SINE Alu -28 284 138 225 286 0 0 chr20 60657697 60657760 -11496122 - MER20B DNA MER1_type 0 783 721 884 293 74 24 chr20 60657763 60658142 -11495740 - LTR16C LTR ERVL -4 487 90 1226 241 40 3 chr20 60658282 60658605 -11495277 - MER20B DNA MER1_type -153 630 296 2455 82 0 0 chr20 60658607 60658913 -11494969 + AluY SINE Alu 1 306 -5 957 120 0 12 chr20 60658925 60659215 -11494667 + AluSx SINE Alu 2 310 0 952 236 49 29 chr20 60659245 60659491 -11494391 - MER20B DNA MER1_type -532 251 1 735 229 88 9 chr20 60660265 60660492 -11493390 + MIR SINE MIR 18 262 0 200 352 28 0 chr20 60660605 60660676 -11493206 + L2 LINE L2 3231 3303 -10 220 263 0 18 chr20 60661200 60661257 -11492625 + MIR SINE MIR 41 96 -166 428 294 41 18 chr20 60661279 60661449 -11492433 + L2 LINE L2 2791 2964 -350 315 226 24 24 chr20 60661453 60661537 -11492345 - MER46C DNA MER2_type -186 152 69 579 130 0 0 chr20 60661540 60661632 -11492250 + MER53 DNA DNA 3 94 -95 317 214 14 0 chr20 60661642 60661712 -11492170 - MER46C DNA MER2_type -267 71 1 524 210 26 8 chr20 60661712 60661846 -11492036 - MIR SINE MIR -59 149 19 2130 124 0 13 chr20 60662446 60662761 -11491121 + AluSx SINE Alu 1 311 -1 875 129 0 50 chr20 60663568 60663708 -11490174 - FLAM_C SINE Alu 0 133 1 198 143 0 0 chr20 60664111 60664146 -11489736 + (CA)n Simple_repeat Simple_repeat 1 35 0 207 0 0 0 chr20 60664200 60664223 -11489659 + (TTA)n Simple_repeat Simple_repeat 2 24 0 944 230 0 6 chr20 60664538 60664716 -11489166 - MER45A DNA AcHobo 0 178 2 340 275 174 13 chr20 60664733 60664882 -11489000 + MIR SINE MIR 13 185 -77 383 345 43 26 chr20 60665020 60665273 -11488609 + L2 LINE L2 2796 3051 -221 2078 205 29 8 chr20 60665310 60665793 -11488089 - L1MB7 LINE L1 -9 6175 5683 211 154 26 0 chr20 60666018 60666057 -11487825 + (TAAA)n Simple_repeat Simple_repeat 3 42 0 576 230 9 0 chr20 60667094 60667207 -11486675 - MER81 DNA DNA 0 114 1 605 232 112 54 chr20 60667357 60667749 -11486133 + L1ME4a LINE L1 5592 6006 -115 2045 135 20 0 chr20 60668288 60668591 -11485291 - AluSx SINE Alu -1 311 3 243 0 0 0 chr20 60668831 60668858 -11485024 + (A)n Simple_repeat Simple_repeat 1 27 0 203 333 93 16 chr20 60669057 60669240 -11484642 - MIR SINE MIR 0 262 66 592 205 113 97 chr20 60669247 60669329 -11484553 - MLT1E3 LTR MaLR -384 242 163 385 245 68 20 chr20 60669329 60669476 -11484406 - MLT2C1 LTR ERVL -200 197 44 592 205 113 97 chr20 60669476 60669518 -11484364 - MLT1E3 LTR MaLR -463 163 1 2062 209 87 9 chr20 60670844 60671304 -11482578 + MLT1D LTR MaLR 1 496 -9 22 0 0 0 chr20 60671357 60671379 -11482503 + AT_rich Low_complexity Low_complexity 1 22 0 1959 169 0 0 chr20 60671420 60671721 -11482161 - AluJb SINE Alu -11 301 1 551 230 152 26 chr20 60671785 60671976 -11481906 - MIR SINE MIR -26 236 22 459 304 48 44 chr20 60672023 60672296 -11481586 - MARNA DNA Mariner -237 349 76 183 80 0 0 chr20 60672543 60672568 -11481314 + (TTTTC)n Simple_repeat Simple_repeat 5 29 0 336 291 12 0 chr20 60672660 60672746 -11481136 - L2 LINE L2 -1 3312 3226 1349 176 84 4 chr20 60672747 60673009 -11480873 - L1MB7 LINE L1 -314 5860 5578 1258 168 39 45 chr20 60673003 60673289 -11480593 + L1MB7 LINE L1 5886 6169 -15 * 1067 138 0 0 chr20 60673296 60673456 -11480426 + L1PA11 LINE L1 6015 6174 0 975 220 5 22 chr20 60673725 60673948 -11479934 + MER20 DNA MER1_type 1 219 0 287 182 23 68 chr20 60675934 60676022 -11477860 + L2 LINE L2 3000 3083 -189 189 277 0 0 chr20 60676189 60676236 -11477646 + L2 LINE L2 3226 3272 0 289 299 109 0 chr20 60676690 60676837 -11477045 + MIR SINE MIR 85 247 -15 249 83 0 0 chr20 60676843 60676879 -11477003 + (ATG)n Simple_repeat Simple_repeat 3 38 0 2471 97 0 0 chr20 60677824 60678135 -11475747 + AluSx SINE Alu 1 311 -1 249 257 277 0 chr20 60678154 60678255 -11475627 + MER5A DNA MER1_type 61 189 0 320 265 89 28 chr20 60678336 60678496 -11475386 + MIR SINE MIR 19 188 -63 1732 201 3 27 chr20 60678711 60679080 -11474802 + L1MC3 LINE L1 7401 7760 -25 2063 121 7 0 chr20 60679080 60679360 -11474522 + AluSx SINE Alu 1 282 -30 818 154 0 22 chr20 60679466 60679602 -11474280 + FLAM_C SINE Alu 1 133 0 495 252 27 9 chr20 60679643 60679754 -11474128 - MER81 DNA DNA -1 113 1 270 261 22 80 chr20 60679928 60680066 -11473816 - L2 LINE L2 0 3313 3184 2537 67 3 10 chr20 60680607 60680920 -11472962 + AluY SINE Alu 1 311 0 690 217 138 0 chr20 60681408 60681560 -11472322 + MER45A DNA AcHobo 1 173 -5 728 238 22 32 chr20 60682381 60682566 -11471316 - MER20 DNA MER1_type -18 201 19 228 306 12 0 chr20 60682590 60682675 -11471207 + MIR SINE MIR 71 156 -106 183 341 83 8 chr20 60683011 60683143 -11470739 - MIR SINE MIR -106 156 15 316 303 61 12 chr20 60683197 60683362 -11470520 + MER113 DNA MER1_type? 28 200 -321 249 233 67 0 chr20 60683586 60683646 -11470236 + MLT1J LTR MaLR 114 177 -334 1118 229 33 17 chr20 60683719 60684020 -11469862 + MLT2C1 LTR ERVL 1 306 -91 354 315 21 0 chr20 60684062 60684205 -11469677 + (TA)n Simple_repeat Simple_repeat 1 146 0 223 224 26 0 chr20 60684232 60684308 -11469574 + (TA)n Simple_repeat Simple_repeat 1 78 0 243 276 86 38 chr20 60684457 60684562 -11469320 + MLT1L LTR MaLR 420 529 -86 * 365 270 7 66 chr20 60684550 60684702 -11469180 + MER104 DNA Tc2 36 178 -2 290 204 133 0 chr20 60685598 60685696 -11468186 - MER102b DNA MER1_type 0 341 231 910 231 65 103 chr20 60685730 60685796 -11468086 + L2 LINE L2 2521 2588 -725 775 221 26 32 chr20 60685796 60685986 -11467896 - MER5A DNA MER1_type 0 189 1 910 231 65 103 chr20 60685986 60686109 -11467773 + L2 LINE L2 2588 2714 -599 2235 76 36 33 chr20 60686109 60686413 -11467469 + AluSg SINE Alu 1 305 -5 910 231 65 103 chr20 60686413 60686980 -11466902 + L2 LINE L2 2714 3247 -66 2575 57 0 3 chr20 60687335 60687635 -11466247 + AluY SINE Alu 1 299 -12 216 339 26 26 chr20 60687898 60688013 -11465869 - L2 LINE L2 0 3313 3199 242 336 29 10 chr20 60688243 60688347 -11465535 - L3 LINE CR1 -276 1301 1196 205 345 23 0 chr20 60688699 60688786 -11465096 + L2 LINE L2 2911 2999 -273 262 279 71 33 chr20 60689221 60689404 -11464478 + LTR33 LTR ERVL 332 521 0 418 263 83 0 chr20 60690772 60690905 -11462977 + L1MD2 LINE L1 6215 6358 -1 1162 174 56 19 chr20 60690955 60691168 -11462714 - MER58A DNA MER1_type 0 224 4 210 118 0 0 chr20 60691246 60691280 -11462602 + (TC)n Simple_repeat Simple_repeat 2 35 0 409 248 263 12 chr20 60693135 60693474 -11460408 + L2 LINE L2 2890 3313 0 1206 77 19 0 chr20 60693587 60693743 -11460139 - AluY SINE Alu -12 299 141 2202 102 0 7 chr20 60695013 60695316 -11458566 + AluSg SINE Alu 5 305 -5 266 0 29 0 chr20 60695395 60695429 -11458453 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 200 293 49 0 chr20 60696359 60696441 -11457441 - L2 LINE L2 -194 3078 2993 1498 194 8 0 chr20 60696445 60696733 -11457149 + AluJb SINE Alu 31 320 0 2274 109 0 6 chr20 60697215 60697527 -11456355 + AluSx SINE Alu 3 312 0 180 0 0 0 chr20 60697660 60697680 -11456202 + (TTCA)n Simple_repeat Simple_repeat 4 23 0 423 279 18 9 chr20 60697998 60698109 -11455773 - MER81 DNA DNA -1 113 2 2076 129 0 0 chr20 60698555 60698841 -11455041 - AluSx SINE Alu -7 305 20 298 217 139 35 chr20 60698950 60699065 -11454817 - MIR SINE MIR -115 147 21 521 266 53 5 chr20 60699187 60699375 -11454507 + MER102a DNA MER1_type 104 300 -30 2423 93 0 0 chr20 60699386 60699686 -11454196 - AluSg SINE Alu -9 301 2 844 252 86 28 chr20 60700356 60700717 -11453165 - MER113 DNA MER1_type? -108 413 32 713 262 63 5 chr20 60700719 60700940 -11452942 + MIR SINE MIR 8 241 -21 286 290 0 0 chr20 60700955 60701024 -11452858 + (ATG)n Simple_repeat Simple_repeat 1 69 0 358 194 51 51 chr20 60701332 60701430 -11452452 - MIR SINE MIR -113 149 52 243 257 68 0 chr20 60701486 60701560 -11452322 + L2 LINE L2 2986 3064 -249 427 214 83 21 chr20 60701659 60701804 -11452078 + MIR SINE MIR 100 253 -9 310 276 122 16 chr20 60701795 60701918 -11451964 + L2 LINE L2 3173 3308 -5 * 2512 124 6 3 chr20 60701933 60702296 -11451586 + THE1B LTR MaLR 1 364 0 218 356 45 15 chr20 60702848 60702980 -11450902 + L2 LINE L2 2953 3088 -184 206 315 0 0 chr20 60703026 60703080 -11450802 - L2 LINE L2 -2 3270 3217 533 234 0 0 chr20 60704255 60704362 -11449520 - MER58B DNA MER1_type 0 341 235 239 303 0 30 chr20 60704761 60704827 -11449055 + L2 LINE L2 3190 3253 -19 461 302 28 117 chr20 60705051 60705409 -11448473 + L2 LINE L2 2897 3222 -50 539 269 146 53 chr20 60705937 60706169 -11447713 + MLT1H1 LTR MaLR 16 225 -330 2189 117 7 0 chr20 60706169 60706468 -11447414 + AluSx SINE Alu 1 301 -11 539 269 146 53 chr20 60706468 60706768 -11447114 + MLT1H1 LTR MaLR 225 554 -1 2010 131 0 0 chr20 60706777 60707052 -11446830 - AluSx SINE Alu -4 308 34 253 319 43 37 chr20 60707270 60707433 -11446449 - MIR3 SINE MIR -4 204 41 1905 155 3 23 chr20 60708982 60709291 -11444591 - AluJo SINE Alu -9 303 1 2649 245 29 17 chr20 60710121 60710705 -11443177 + MLT1E LTR MaLR 3 593 0 227 191 191 16 chr20 60710770 60710833 -11443049 - MIR3 SINE MIR -48 160 87 222 304 116 18 chr20 60710825 60710937 -11442945 + MIR3 SINE MIR 49 171 -37 * 361 303 32 7 chr20 60711044 60711199 -11442683 + MER103 DNA DNA 3 161 -5 261 204 21 21 chr20 60711591 60711684 -11442198 + T-rich Low_complexity Low_complexity 2 94 0 202 403 0 0 chr20 60712996 60713063 -11440819 - L2 LINE L2 -83 3189 3123 409 252 50 11 chr20 60713312 60713469 -11440413 + L1ME3 LINE L1 6011 6170 0 355 221 124 18 chr20 60713469 60713582 -11440300 + MER5B DNA MER1_type 51 175 -3 396 231 22 11 chr20 60714007 60714098 -11439784 - MER81 DNA DNA -22 92 1 331 279 72 9 chr20 60714108 60714219 -11439663 + MIR SINE MIR 145 262 0 254 191 0 0 chr20 60714277 60714324 -11439558 + L2 LINE L2 3264 3310 -3 229 254 17 0 chr20 60714730 60714789 -11439093 + MLT1J LTR MaLR 110 169 -342 2180 109 10 0 chr20 60715099 60715393 -11438489 - AluSg SINE Alu -13 297 1 180 111 0 0 chr20 60715671 60715698 -11438184 + (A)n Simple_repeat Simple_repeat 1 27 0 2473 60 0 10 chr20 60715853 60716152 -11437730 + AluY SINE Alu 1 296 -15 2203 101 0 0 chr20 60716161 60716475 -11437407 + AluSc SINE Alu 1 314 0 1764 40 0 0 chr20 60716836 60717056 -11436826 + L1PA3 LINE L1 5940 6159 0 571 296 111 5 chr20 60717218 60717434 -11436448 - MIR SINE MIR -10 252 14 414 293 42 45 chr20 60719627 60719792 -11434090 - MIR3 SINE MIR -62 146 2 1927 131 29 35 chr20 60719833 60720147 -11433735 + AluSx SINE Alu 1 312 0 24 67 0 0 chr20 60721154 60721199 -11432683 + AT_rich Low_complexity Low_complexity 1 45 0 22 0 0 0 chr20 60721674 60721696 -11432186 + AT_rich Low_complexity Low_complexity 1 22 0 639 295 75 66 chr20 60722487 60722941 -11430941 + L2 LINE L2 2856 3313 0 751 250 88 13 chr20 60723237 60723465 -11430417 - MIR SINE MIR -1 261 17 1385 163 52 68 chr20 60723535 60723842 -11430040 + AluJb SINE Alu 1 302 -10 180 0 0 0 chr20 60725035 60725055 -11428827 + (T)n Simple_repeat Simple_repeat 1 20 0 889 248 116 56 chr20 60725104 60725587 -11428295 - MER113 DNA MER1_type? -9 512 1 593 288 30 20 chr20 60725677 60725875 -11428007 - MIR SINE MIR -61 201 2 185 286 24 63 chr20 60726657 60726783 -11427099 - MIR SINE MIR -70 192 72 * 284 269 138 31 chr20 60726780 60726940 -11426942 - MIR SINE MIR -6 256 80 483 130 8 199 chr20 60726989 60727048 -11426834 - MER63 DNA MER1_type -104 732 663 2200 114 0 7 chr20 60727048 60727355 -11426527 - AluSc SINE Alu -4 305 1 483 130 8 199 chr20 60727355 60727426 -11426456 - MER63 DNA MER1_type -173 663 1 2018 134 0 13 chr20 60727611 60727910 -11425972 - AluSx SINE Alu -17 295 1 280 242 13 4 chr20 60728184 60728262 -11425620 + MIR SINE MIR 50 125 -92 1443 125 9 19 chr20 60728427 60728643 -11425239 + AluJo SINE Alu 87 300 -12 391 324 52 7 chr20 60729441 60729577 -11424305 + LTR67 LTR ERVL 412 553 -4 2172 123 0 3 chr20 60729599 60729901 -11423981 - AluSx SINE Alu -11 301 1 1109 191 10 5 chr20 60730061 60730255 -11423627 - MER58A DNA MER1_type 0 224 30 189 295 74 66 chr20 60730316 60730438 -11423444 + MIR SINE MIR 34 156 -106 213 353 59 8 chr20 60730556 60730675 -11423207 + L2 LINE L2 3143 3267 -5 716 259 38 84 chr20 60730803 60731066 -11422816 - MER102a DNA MER1_type -4 326 76 353 290 19 9 chr20 60731341 60731448 -11422434 + L2 LINE L2 2974 3081 -232 5685 113 5 0 chr20 60731448 60732265 -11421617 + L1PB2 LINE L1 5327 6147 -4 27 49 0 0 chr20 60732265 60732306 -11421576 + AT_rich Low_complexity Low_complexity 1 41 0 699 248 69 0 chr20 60732313 60732515 -11421367 + L2 LINE L2 3098 3313 0 2234 100 0 32 chr20 60732663 60732972 -11420910 - AluSx SINE Alu -13 299 1 22 35 0 0 chr20 60733175 60733204 -11420678 + AT_rich Low_complexity Low_complexity 1 29 0 257 330 72 0 chr20 60733711 60733808 -11420074 - L2 LINE L2 -50 3222 3119 360 0 0 0 chr20 60734164 60734204 -11419678 + (TG)n Simple_repeat Simple_repeat 2 41 0 1436 171 64 50 chr20 60734205 60734485 -11419397 - AluJo SINE Alu -25 287 4 349 277 129 0 chr20 60735134 60735235 -11418647 + L2 LINE L2 3200 3313 0 2116 122 3 31 chr20 60735341 60735662 -11418220 - AluSx SINE Alu 0 312 1 1027 189 153 129 chr20 60736029 60736501 -11417381 - MER45C DNA AcHobo -444 509 27 1597 172 53 33 chr20 60736647 60736950 -11416932 - AluJb SINE Alu -3 309 1 967 186 0 34 chr20 60738077 60738254 -11415628 + FRAM SINE Alu 4 174 -2 428 330 77 15 chr20 60738417 60738643 -11415239 + MIR SINE MIR 18 257 -5 369 293 143 67 chr20 60739212 60739367 -11414515 - L2 LINE L2 0 3313 3171 2948 93 0 6 chr20 60739367 60739731 -11414151 + THE1B LTR MaLR 3 364 0 369 293 143 67 chr20 60739731 60739933 -11413949 - L2 LINE L2 -142 3171 2929 303 175 0 63 chr20 60740208 60740271 -11413611 + MIR SINE MIR 105 163 -99 848 212 42 141 chr20 60740953 60741358 -11412524 - MLT1A1 LTR MaLR 0 365 1 526 357 146 9 chr20 60741474 60741816 -11412066 - L2 LINE L2 0 3313 2925 1184 241 50 65 chr20 60742462 60742905 -11410977 - LTR16A1 LTR ERVL 0 457 22 2265 147 96 10 chr20 60742905 60743299 -11410583 - MSTA LTR MaLR 0 428 1 187 346 0 0 chr20 60743397 60743449 -11410433 - L2 LINE L2 0 3272 3221 1161 243 70 3 chr20 60743626 60743926 -11409956 + MER33 DNA MER1_type 1 320 -4 696 257 76 56 chr20 60745613 60745901 -11407981 - MER102b DNA MER1_type -47 294 1 1821 172 0 7 chr20 60746132 60746440 -11407442 + AluJb SINE Alu 1 306 -6 313 216 59 183 chr20 60747329 60747685 -11406197 - MLT1H LTR MaLR -1 548 237 303 359 75 13 chr20 60747853 60748012 -11405870 - MIR SINE MIR -92 170 2 354 287 92 56 chr20 60748764 60748959 -11404923 - MIR SINE MIR -1 261 60 1159 167 48 0 chr20 60748985 60749171 -11404711 - MER58A DNA MER1_type -2 222 28 421 277 7 47 chr20 60749173 60749321 -11404561 + MIR SINE MIR 71 212 -50 716 281 20 10 chr20 60749419 60749615 -11404267 + MIR SINE MIR 44 241 -21 1777 231 39 9 chr20 60749713 60750146 -11403736 - Charlie4a DNA MER1_type 0 508 63 289 256 35 0 chr20 60751130 60751216 -11402666 + GA-rich Low_complexity Low_complexity 3 91 0 480 326 52 55 chr20 60751306 60751549 -11402333 - L2 LINE L2 -2 3311 3068 697 206 0 16 chr20 60751549 60751675 -11402207 + FLAM_C SINE Alu 1 124 -9 480 326 52 55 chr20 60751675 60751774 -11402108 - L2 LINE L2 -245 3068 2970 * 557 310 18 22 chr20 60751772 60752001 -11401881 - MIR SINE MIR -6 256 29 2195 111 0 0 chr20 60752758 60753047 -11400835 - AluSg SINE Alu -21 289 1 410 326 59 0 chr20 60753053 60753292 -11400590 + L1ME LINE L1 5517 5769 -352 238 227 0 0 chr20 60753330 60753374 -11400508 + MER113 DNA MER1_type? 1 44 -477 446 137 0 0 chr20 60753404 60753477 -11400405 - L1MA2 LINE L1 0 6304 6232 218 81 27 0 chr20 60754358 60754395 -11399487 + (GAAAA)n Simple_repeat Simple_repeat 2 39 0 1837 162 0 7 chr20 60754469 60754759 -11399123 + AluSx SINE Alu 1 288 -24 232 326 21 11 chr20 60754829 60754924 -11398958 + MIR SINE MIR 2 97 -165 328 298 39 0 chr20 60754962 60755066 -11398816 + MIR SINE MIR 37 144 -118 252 289 0 22 chr20 60756049 60756139 -11397743 + GA-rich Low_complexity Low_complexity 1 88 0 1723 113 120 8 chr20 60756441 60756707 -11397175 - AluSg SINE Alu -14 296 1 23 54 0 0 chr20 60757721 60757758 -11396124 + AT_rich Low_complexity Low_complexity 1 37 0 196 235 0 59 chr20 60758223 60758274 -11395608 + MIR SINE MIR 98 145 -63 465 90 0 0 chr20 60759097 60759164 -11394718 + (CA)n Simple_repeat Simple_repeat 2 68 0 928 335 10 10 chr20 60759274 60759686 -11394196 - L1ME1 LINE L1 -15 6151 5740 1654 156 3 35 chr20 60759717 60760030 -11393852 - AluJo SINE Alu 0 306 3 1845 146 181 27 chr20 60760070 60760441 -11393441 - MSTC LTR MaLR 0 428 1 320 305 35 46 chr20 60760568 60760742 -11393140 - MIR SINE MIR 0 262 91 256 350 57 41 chr20 60761672 60761918 -11391964 + L2 LINE L2 2479 2728 -586 303 224 91 73 chr20 60762005 60762170 -11391712 - MER113 DNA MER1_type? -353 168 1 2431 65 0 10 chr20 60762228 60762534 -11391348 + AluY SINE Alu 1 303 -8 245 324 113 81 chr20 60762694 60763040 -11390842 + L2 LINE L2 2914 3270 -2 408 352 55 0 chr20 60763306 60763451 -11390431 + L2 LINE L2 3117 3269 -3 549 235 29 22 chr20 60764140 60764276 -11389606 - L2 LINE L2 0 3272 3136 215 143 52 52 chr20 60764295 60764372 -11389510 + (TATAA)n Simple_repeat Simple_repeat 2 78 0 2629 56 0 0 chr20 60764386 60764692 -11389190 + AluY SINE Alu 1 306 -5 724 211 135 103 chr20 60766218 60766626 -11387256 - MLT1K LTR MaLR -17 571 151 2391 50 4 0 chr20 60767539 60767845 -11386037 + AluY SINE Alu 1 307 0 4421 127 8 65 chr20 60767890 60768623 -11385259 - LTR8 LTR ERV1 0 691 1 831 253 73 4 chr20 60768628 60768873 -11385009 - MIR SINE MIR 0 262 1 32 0 0 0 chr20 60768966 60768998 -11384884 + AT_rich Low_complexity Low_complexity 1 32 0 1411 251 23 6 chr20 60769519 60769869 -11384013 - LTR16C LTR ERVL 0 491 136 218 338 25 0 chr20 60769978 60770058 -11383824 + MIR SINE MIR 144 225 -37 239 230 0 68 chr20 60770092 60770166 -11383716 - MLT1K LTR MaLR -74 514 446 2022 122 4 0 chr20 60771838 60772141 -11381741 - AluSg SINE Alu 0 304 1 986 234 23 0 chr20 60772364 60772578 -11381304 + MER20 DNA MER1_type 1 219 0 801 264 67 5 chr20 60774167 60774375 -11379507 - MIR SINE MIR -29 233 13 463 257 40 0 chr20 60774490 60774591 -11379291 + MER58 DNA MER1_type 1 105 -236 * 720 142 9 0 chr20 60774586 60774699 -11379183 + MER58 DNA MER1_type 2287 2400 -20 216 0 0 0 chr20 60774742 60774766 -11379116 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 432 171 38 0 chr20 60774778 60774883 -11378999 + GA-rich Low_complexity Low_complexity 3 111 0 849 275 62 28 chr20 60775533 60775857 -11378025 - MER46C DNA MER2_type 0 338 4 417 202 30 20 chr20 60776224 60776323 -11377559 + MER104 DNA Tc2 14 113 -67 579 217 0 0 chr20 60776452 60776604 -11377278 + (CCCTAA)n Simple_repeat Simple_repeat 3 154 0 252 318 100 0 chr20 60776629 60776739 -11377143 - Charlie8 DNA MER1_type -2213 204 84 359 314 57 61 chr20 60776936 60777181 -11376701 - L2 LINE L2 -102 3170 2927 260 344 16 8 chr20 60777564 60777686 -11376196 - LTR67 LTR ERVL -7 550 428 1252 265 47 10 chr20 60777862 60778269 -11375613 - MLT1H LTR MaLR -8 541 40 22 35 0 0 chr20 60778520 60778549 -11375333 + AT_rich Low_complexity Low_complexity 1 29 0 291 358 45 6 chr20 60778813 60778989 -11374893 + MIR SINE MIR 69 251 -11 207 0 0 0 chr20 60779180 60779203 -11374679 + (T)n Simple_repeat Simple_repeat 1 23 0 259 326 29 7 chr20 60779351 60779489 -11374393 - LTR33 LTR ERVL -15 506 366 401 303 55 0 chr20 60779556 60779721 -11374161 - LTR33 LTR ERVL -347 174 1 680 263 132 61 chr20 60780048 60780474 -11373408 + Charlie8 DNA MER1_type 57 512 -1905 302 320 77 26 chr20 60780590 60780746 -11373136 - MIR SINE MIR -51 211 48 1117 156 0 0 chr20 60781534 60781694 -11372188 - FRAM SINE Alu -12 164 5 767 299 119 29 chr20 60781922 60782658 -11371224 - L2 LINE L2 0 3313 2518 248 305 45 39 chr20 60782890 60783044 -11370838 + L2 LINE L2 2560 2714 -600 561 261 0 12 chr20 60783044 60783205 -11370677 + MER113 DNA MER1_type? 92 250 -271 269 259 23 0 chr20 60783225 60783326 -11370556 - MIR SINE MIR -63 145 77 1442 185 0 0 chr20 60783407 60783629 -11370253 + MER58A DNA MER1_type 3 224 0 435 353 127 42 chr20 60783908 60784394 -11369488 - L2 LINE L2 -1 3271 2740 1814 144 87 0 chr20 60784614 60784891 -11368991 + AluSx SINE Alu 1 301 -11 233 271 17 0 chr20 60785210 60785269 -11368613 - MLT1K LTR MaLR -12 576 517 320 324 155 24 chr20 60785278 60785559 -11368323 - L2 LINE L2 -248 3065 2736 2017 155 29 29 chr20 60785559 60785934 -11367948 - THE1C LTR MaLR 0 375 1 320 324 155 24 chr20 60785934 60785991 -11367891 - L2 LINE L2 -577 2736 2688 * 490 299 78 5 chr20 60785986 60786190 -11367692 - MIR SINE MIR -11 251 33 502 305 26 0 chr20 60787313 60787464 -11366418 + MLT1F1 LTR MaLR 30 184 -409 234 0 0 0 chr20 60787488 60787514 -11366368 + (T)n Simple_repeat Simple_repeat 1 26 0 300 27 0 0 chr20 60787559 60787596 -11366286 + (TTTTA)n Simple_repeat Simple_repeat 4 40 0 1134 0 0 0 chr20 60787596 60787717 -11366165 - L1HS LINE L1 -16 6139 6019 998 227 187 28 chr20 60787717 60788043 -11365839 + MLT1F1 LTR MaLR 190 567 0 428 264 78 87 chr20 60788044 60788494 -11365388 - L1ME4a LINE L1 -224 5897 5452 756 191 106 11 chr20 60788625 60788813 -11365069 + MER3 DNA MER1_type 2 207 -2 521 109 0 22 chr20 60789184 60789276 -11364606 + (TGGA)n Simple_repeat Simple_repeat 4 93 0 394 305 86 40 chr20 60789285 60789459 -11364423 - MIR SINE MIR 0 262 81 181 305 37 24 chr20 60790371 60790453 -11363429 - L2 LINE L2 0 3313 3231 848 174 0 0 chr20 60790463 60790595 -11363287 + FLAM_C SINE Alu 1 132 -11 2137 146 0 0 chr20 60790616 60790924 -11362958 + AluSx SINE Alu 1 308 -4 665 301 79 46 chr20 60790928 60791381 -11362501 - L2 LINE L2 -78 3235 2766 621 333 54 0 chr20 60791407 60791629 -11362253 - MIR SINE MIR -27 235 2 300 70 0 0 chr20 60791691 60791734 -11362148 + (TG)n Simple_repeat Simple_repeat 2 44 0 773 214 87 24 chr20 60792287 60792493 -11361389 - MER20 DNA MER1_type 0 219 1 328 182 281 46 chr20 60792720 60792888 -11360994 - MLT1J2 LTR MaLR 0 450 249 188 318 68 34 chr20 60793162 60793250 -11360632 - MER5A DNA MER1_type -55 134 44 295 202 71 12 chr20 60793659 60793743 -11360139 + L2 LINE L2 3225 3313 0 317 283 23 40 chr20 60793925 60794098 -11359784 + (TATATG)n Simple_repeat Simple_repeat 1 170 0 332 340 9 9 chr20 60794186 60794320 -11359562 - MIR SINE MIR -71 137 4 694 194 5 112 chr20 60794586 60794792 -11359090 - MER20 DNA MER1_type 0 219 36 259 254 0 0 chr20 60795036 60795103 -11358779 + A-rich Low_complexity Low_complexity 1 67 0 25 0 0 0 chr20 60795806 60795831 -11358051 + AT_rich Low_complexity Low_complexity 1 25 0 198 0 0 0 chr20 60796527 60796549 -11357333 + (TTTTTA)n Simple_repeat Simple_repeat 2 23 0 673 250 13 0 chr20 60796766 60796918 -11356964 - MIR SINE MIR -77 185 32 422 270 108 34 chr20 60797023 60797171 -11356711 + MIR SINE MIR 19 177 -85 192 125 0 0 chr20 60797322 60797354 -11356528 + (TAAAA)n Simple_repeat Simple_repeat 4 35 0 2220 97 0 3 chr20 60797452 60797742 -11356140 + AluSg SINE Alu 1 289 -21 198 103 0 0 chr20 60797852 60797881 -11356001 + (TAGG)n Simple_repeat Simple_repeat 3 31 0 195 167 0 0 chr20 60798093 60798135 -11355747 + (CA)n Simple_repeat Simple_repeat 2 43 0 191 313 162 0 chr20 60798613 60798712 -11355170 + MIR SINE MIR 40 154 -108 213 121 0 0 chr20 60799222 60799255 -11354627 + (TTC)n Simple_repeat Simple_repeat 2 34 0 2314 87 10 3 chr20 60799257 60799566 -11354316 - AluSq SINE Alu -2 311 1 534 246 87 33 chr20 60799957 60800140 -11353742 - L2 LINE L2 -3 3310 3118 2385 107 0 0 chr20 60800801 60801110 -11352772 - AluSc SINE Alu 0 309 1 829 146 0 29 chr20 60801172 60801309 -11352573 - FLAM_C SINE Alu -10 133 1 419 286 201 0 chr20 60801487 60801641 -11352241 - MER5A DNA MER1_type -1 188 4 934 211 47 39 chr20 60801678 60801934 -11351948 + ORSL DNA AcHobo 1 258 -17 312 230 278 0 chr20 60801983 60802109 -11351773 + MIR SINE MIR 101 261 -1 519 177 9 35 chr20 60804791 60804904 -11348978 + L1PB4 LINE L1 6047 6156 0 403 308 104 32 chr20 60805193 60805501 -11348381 + L2 LINE L2 2969 3298 -15 1992 64 0 0 chr20 60805732 60805968 -11347914 + AluY SINE Alu 1 236 -75 569 167 5 54 chr20 60806221 60806407 -11347475 + CT-rich Low_complexity Low_complexity 4 180 0 195 100 0 0 chr20 60806482 60806512 -11347370 + (TTCA)n Simple_repeat Simple_repeat 3 32 0 336 267 0 12 chr20 60808379 60808465 -11345417 - L2 LINE L2 -1 3271 3187 302 253 221 0 chr20 60808632 60808790 -11345092 - L1ME4a LINE L1 -59 6062 5870 1825 133 3 30 chr20 60808814 60809114 -11344768 - AluSx SINE Alu 0 312 21 283 275 156 33 chr20 60809117 60809328 -11344554 - L1MC4 LINE L1 -299 7743 7507 1256 107 254 48 chr20 60809518 60809770 -11344112 + AluSg1 SINE Alu 1 304 -5 429 294 123 11 chr20 60810259 60810446 -11343436 - MER63A DNA MER1_type -2 208 1 312 338 1 25 chr20 60810458 60810604 -11343278 + MER5A DNA MER1_type 5 158 -31 25 0 0 0 chr20 60811023 60811048 -11342834 + AT_rich Low_complexity Low_complexity 1 25 0 442 254 113 40 chr20 60812972 60813149 -11340733 - MIR SINE MIR -7 255 66 290 298 89 54 chr20 60813385 60813553 -11340329 - MER102a DNA MER1_type -15 315 142 244 152 36 196 chr20 60813592 60813704 -11340178 + MIR SINE MIR 147 240 -22 287 306 111 0 chr20 60813758 60813866 -11340016 + L2 LINE L2 3153 3272 0 1825 177 0 3 chr20 60813927 60814210 -11339672 + AluJb SINE Alu 1 282 -30 495 0 0 0 chr20 60814210 60814265 -11339617 + (TA)n Simple_repeat Simple_repeat 2 56 0 183 205 0 0 chr20 60815256 60815295 -11338587 + (CATATA)n Simple_repeat Simple_repeat 4 42 0 2090 138 0 0 chr20 60815507 60815797 -11338085 + AluSx SINE Alu 1 290 -22 25 0 0 0 chr20 60816127 60816152 -11337730 + AT_rich Low_complexity Low_complexity 1 25 0 389 274 9 0 chr20 60816199 60816305 -11337577 - MIR SINE MIR -83 179 73 183 42 0 0 chr20 60816419 60816443 -11337439 + (A)n Simple_repeat Simple_repeat 1 24 0 248 333 56 0 chr20 60816473 60816563 -11337319 + L2 LINE L2 3161 3255 -17 237 65 0 0 chr20 60817295 60817326 -11336556 + (A)n Simple_repeat Simple_repeat 1 31 0 246 295 62 62 chr20 60817620 60817749 -11336133 + L2 LINE L2 3129 3257 -15 214 200 0 0 chr20 60819390 60819430 -11334452 + (TA)n Simple_repeat Simple_repeat 2 41 0 234 0 0 0 chr20 60820494 60820520 -11333362 + (A)n Simple_repeat Simple_repeat 1 26 0 22 0 0 0 chr20 60821433 60821455 -11332427 + AT_rich Low_complexity Low_complexity 1 22 0 451 330 58 0 chr20 60822502 60822675 -11331207 - MIR SINE MIR -51 211 29 209 339 69 31 chr20 60822755 60822885 -11330997 - MIR3 SINE MIR -18 190 56 1764 145 88 3 chr20 60823343 60823626 -11330256 + AluSx SINE Alu 1 307 -5 976 224 51 58 chr20 60823673 60823968 -11329914 - MLT1E3 LTR MaLR -331 293 1 244 274 103 17 chr20 60823968 60824085 -11329797 + MIR SINE MIR 117 243 -19 321 263 54 15 chr20 60824396 60824551 -11329331 - L2 LINE L2 -322 2991 2831 261 0 0 0 chr20 60824776 60824805 -11329077 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 634 257 13 18 chr20 60824922 60825148 -11328734 + L1MC5 LINE L1 7696 7920 -41 312 319 69 14 chr20 60825163 60825307 -11328575 - L2 LINE L2 -467 2847 2696 2018 232 39 8 chr20 60825308 60825796 -11328086 - MLT1D LTR MaLR -2 503 1 988 164 5 82 chr20 60825825 60826032 -11327850 - MER20 DNA MER1_type -3 216 26 187 328 47 0 chr20 60826048 60826112 -11327770 - L2 LINE L2 -736 2578 2512 341 310 112 33 chr20 60826600 60826842 -11327040 - MIR SINE MIR 0 262 2 1992 110 11 0 chr20 60827319 60827582 -11326300 - AluSx SINE Alu -9 303 38 598 223 62 104 chr20 60827620 60827929 -11325953 - MER102a DNA MER1_type -2 328 33 568 239 38 19 chr20 60827988 60828147 -11325735 + MER33 DNA MER1_type 1 162 -162 219 219 30 18 chr20 60828156 60828325 -11325557 + (TTATA)n Simple_repeat Simple_repeat 2 172 0 467 186 99 6 chr20 60828357 60828518 -11325364 + (ATATG)n Simple_repeat Simple_repeat 3 178 0 657 211 6 19 chr20 60828551 60828712 -11325170 + MER33 DNA MER1_type 166 324 0 371 296 25 91 chr20 60828761 60828927 -11324955 - MIR SINE MIR 0 262 119 2251 75 7 42 chr20 60828927 60829234 -11324648 + AluSg SINE Alu 1 296 -14 371 296 25 91 chr20 60829234 60829341 -11324541 - MIR SINE MIR -143 119 7 343 297 19 108 chr20 60829921 60830066 -11323816 + MIR SINE MIR 9 123 -139 2235 97 3 7 chr20 60830066 60830364 -11323518 + AluSg SINE Alu 1 297 -13 343 297 19 108 chr20 60830364 60830477 -11323405 + MIR SINE MIR 123 244 -18 1469 195 0 69 chr20 60831793 60832127 -11321755 - AluJo SINE Alu -1 311 1 516 260 42 23 chr20 60832684 60832895 -11320987 - MIR SINE MIR -1 261 52 2115 112 28 0 chr20 60833228 60833514 -11320368 - AluSx SINE Alu -18 294 1 3722 164 55 16 chr20 60834176 60834914 -11318968 - LTR1B LTR ERV1 0 785 1 728 180 27 33 chr20 60835195 60835378 -11318504 - MIR SINE MIR -2 260 79 329 182 152 20 chr20 60835495 60835594 -11318288 - ORSL DNA AcHobo -24 251 140 751 226 13 0 chr20 60835703 60835862 -11318020 + FRAM SINE Alu 7 167 -9 750 243 75 0 chr20 60835880 60836053 -11317829 - L1PB4 LINE L1 -3 6153 5968 459 297 115 48 chr20 60836689 60837189 -11316693 - MLT1K LTR MaLR 0 588 16 252 59 0 0 chr20 60837694 60837728 -11316154 + (GA)n Simple_repeat Simple_repeat 1 34 0 190 333 63 0 chr20 60838046 60838109 -11315773 - L2 LINE L2 -10 3262 3196 445 265 34 102 chr20 60838272 60838560 -11315322 - L2 LINE L2 -15 3298 3033 1545 175 7 40 chr20 60838560 60838863 -11315019 + AluSx SINE Alu 9 301 -11 445 265 34 102 chr20 60838863 60838899 -11314983 - L2 LINE L2 -280 3033 2996 2436 74 3 16 chr20 60839713 60840024 -11313858 + AluSp SINE Alu 1 307 -6 293 340 10 0 chr20 60840894 60840994 -11312888 - L3 LINE CR1 -418 1159 1059 215 213 0 0 chr20 60841489 60841536 -11312346 - MIR SINE MIR -108 154 108 242 333 10 10 chr20 60841938 60842037 -11311845 - MIR SINE MIR -64 198 100 183 250 0 19 chr20 60842142 60842194 -11311688 - MIR3 SINE MIR -42 166 116 699 288 111 39 chr20 60842582 60842943 -11310939 + Charlie8 DNA MER1_type 83 469 -1948 470 303 45 6 chr20 60843828 60844006 -11309876 - Charlie8 DNA MER1_type -2196 221 37 864 241 0 0 chr20 60844642 60844816 -11309066 + MER58A DNA MER1_type 46 219 -5 706 239 87 38 chr20 60844906 60845087 -11308795 - MER102a DNA MER1_type -1087 330 131 2333 128 19 25 chr20 60845087 60845453 -11308429 + THE1B LTR MaLR 1 364 0 706 239 87 38 chr20 60845453 60845535 -11308347 - MER102a DNA MER1_type -1286 131 54 705 246 34 29 chr20 60847050 60847257 -11306625 - MER3 DNA MER1_type -1 208 1 1567 214 83 51 chr20 60847456 60847523 -11306359 + L1MD2 LINE L1 5864 5927 -432 1825 173 0 13 chr20 60847523 60847824 -11306058 - AluJo SINE Alu -15 297 1 1567 214 83 51 chr20 60847824 60848027 -11305855 + L1MD2 LINE L1 5927 6122 -237 288 0 0 0 chr20 60848027 60848059 -11305823 + (CA)n Simple_repeat Simple_repeat 2 33 0 1567 214 83 51 chr20 60848059 60848258 -11305624 + L1MD2 LINE L1 6122 6349 -10 520 319 6 0 chr20 60848511 60848693 -11305189 + MIR SINE MIR 68 250 -12 2401 104 0 0 chr20 60848694 60849001 -11304881 + AluSx SINE Alu 1 307 -5 1100 222 33 0 chr20 60849090 60849302 -11304580 - MER58A DNA MER1_type -3 221 3 379 309 30 19 chr20 60849714 60849880 -11304002 - MIR SINE MIR -60 202 36 420 55 0 0 chr20 60850247 60850302 -11303580 + (CA)n Simple_repeat Simple_repeat 2 56 0 304 310 190 19 chr20 60850339 60850497 -11303385 + MIR SINE MIR 28 212 -50 276 91 0 0 chr20 60850543 60850587 -11303295 + (TG)n Simple_repeat Simple_repeat 2 45 0 718 168 117 41 chr20 60850795 60850992 -11302890 - MER20 DNA MER1_type 0 219 8 315 0 0 0 chr20 60851591 60851626 -11302256 + (CA)n Simple_repeat Simple_repeat 2 36 0 184 100 50 0 chr20 60851988 60852028 -11301854 + CT-rich Low_complexity Low_complexity 3 44 0 372 22 0 0 chr20 60852229 60852274 -11301608 + (CA)n Simple_repeat Simple_repeat 2 46 0 851 173 46 18 chr20 60852600 60852806 -11301076 - MER20 DNA MER1_type 0 219 4 536 135 24 95 chr20 60852810 60852936 -11300946 - MER20 DNA MER1_type -98 121 5 444 201 35 21 chr20 60853821 60854117 -11299765 + GA-rich Low_complexity Low_complexity 1 300 0 226 225 0 0 chr20 60854416 60854456 -11299426 + polypyrimidine Low_complexity Low_complexity 6 45 0 2253 95 27 3 chr20 60854680 60854976 -11298906 + AluSg SINE Alu 2 304 -6 1852 154 3 17 chr20 60855960 60856258 -11297624 - AluJo SINE Alu -18 294 1 645 156 0 0 chr20 60856704 60856813 -11297069 + FRAM SINE Alu 53 161 -15 215 209 0 0 chr20 60856839 60856882 -11297000 - MIR SINE MIR -16 246 204 1133 166 27 31 chr20 60856908 60857167 -11296715 - HsTC2 DNA Tc2 0 1898 1641 531 191 67 0 chr20 60857167 60857272 -11296610 - HsTC2 DNA Tc2 -1784 114 3 321 263 83 26 chr20 60857287 60857443 -11296439 - L2 LINE L2 -33 3280 3116 532 206 0 0 chr20 60857617 60857719 -11296163 - MIR SINE MIR -104 158 57 795 308 82 44 chr20 60858395 60859043 -11294839 - L2 LINE L2 0 3313 2642 2069 126 0 7 chr20 60859231 60859538 -11294344 - AluSx SINE Alu 0 305 1 194 263 222 35 chr20 60859542 60859713 -11294169 + MIR SINE MIR 47 249 -13 332 345 0 42 chr20 60860634 60860703 -11293179 + MIR SINE MIR 21 91 -171 2159 133 32 35 chr20 60860703 60861079 -11292803 - THE1C LTR MaLR 0 375 1 332 345 0 42 chr20 60861079 60861177 -11292705 + MIR SINE MIR 91 181 -81 249 83 0 0 chr20 60861566 60861602 -11292280 + (TG)n Simple_repeat Simple_repeat 1 36 0 225 0 0 0 chr20 60862905 60862930 -11290952 + (A)n Simple_repeat Simple_repeat 1 25 0 205 240 20 0 chr20 60863100 60863150 -11290732 - L2 LINE L2 -49 3264 3214 980 140 33 0 chr20 60863152 60863302 -11290580 - MER20 DNA MER1_type -48 171 17 210 355 73 27 chr20 60863489 60863599 -11290283 - L2 LINE L2 -16 3256 3142 626 0 14 0 chr20 60864776 60864850 -11289032 + (TAGA)n Simple_repeat Simple_repeat 4 78 0 643 290 46 0 chr20 60865752 60865969 -11287913 - MIR SINE MIR -16 246 20 346 123 138 0 chr20 60866015 60866080 -11287802 - MADE1 DNA Mariner 0 80 7 949 189 47 11 chr20 60866216 60866406 -11287476 - MER20 DNA MER1_type -21 198 2 208 240 0 0 chr20 60866870 60866920 -11286962 + (TTCA)n Simple_repeat Simple_repeat 3 52 0 281 233 165 0 chr20 60866921 60867024 -11286858 - L2 LINE L2 0 3272 3153 206 311 40 0 chr20 60867715 60867789 -11286093 + L3 LINE CR1 1498 1574 -3 227 122 20 0 chr20 60867879 60867928 -11285954 + CT-rich Low_complexity Low_complexity 3 52 0 359 300 0 8 chr20 60869200 60869330 -11284552 - MIR SINE MIR -46 216 88 419 207 231 0 chr20 60869665 60869786 -11284096 - MER5A DNA MER1_type -6 183 35 229 192 135 0 chr20 60869982 60870034 -11283848 + Charlie8 DNA MER1_type 1 59 -2358 2223 115 0 10 chr20 60870106 60870418 -11283464 - AluSx SINE Alu -1 311 3 188 255 0 0 chr20 60870720 60870771 -11283111 + L2 LINE L2 3263 3313 0 1745 164 7 17 chr20 60872159 60872451 -11281431 - AluJo SINE Alu -23 289 1 216 0 0 0 chr20 60872910 60872934 -11280948 + (CATTT)n Simple_repeat Simple_repeat 2 25 0 1867 144 3 14 chr20 60872935 60873219 -11280663 - AluSx SINE Alu -31 281 1 542 345 100 20 chr20 60873387 60874144 -11279738 - L2 LINE L2 0 3313 2491 285 29 0 0 chr20 60874980 60875014 -11278868 + (TG)n Simple_repeat Simple_repeat 1 34 0 252 273 0 0 chr20 60875093 60875148 -11278734 - L2 LINE L2 -31 3241 3187 327 212 35 53 chr20 60875260 60875373 -11278509 - MER94 DNA DNA -9 125 15 521 303 67 0 chr20 60876010 60876218 -11277664 + MIR SINE MIR 37 258 -4 255 254 0 0 chr20 60877588 60877643 -11276239 + GA-rich Low_complexity Low_complexity 3 57 0 994 131 21 37 chr20 60883776 60883967 -11269915 - MER53 DNA DNA -1 188 1 434 196 9 0 chr20 60884067 60884174 -11269708 + CT-rich Low_complexity Low_complexity 1 108 0 197 329 12 37 chr20 60884184 60884266 -11269616 - L2 LINE L2 -1 3312 3233 291 317 35 21 chr20 60884297 60884442 -11269440 - MIR SINE MIR -34 228 82 209 271 71 0 chr20 60884730 60884800 -11269082 + MIR SINE MIR 116 190 -72 291 263 61 11 chr20 60885066 60885198 -11268684 - MIR SINE MIR -62 146 15 325 222 111 50 chr20 60887995 60888094 -11265788 + MER81 DNA DNA 9 113 -1 319 125 0 0 chr20 60888105 60888153 -11265729 + U5 snRNA snRNA 1 48 -68 325 238 75 0 chr20 60888271 60888351 -11265531 - MIR SINE MIR -69 193 108 259 190 0 17 chr20 60889230 60889288 -11264594 - MIR SINE MIR -73 135 79 228 135 0 0 chr20 60889956 60889993 -11263889 + (TCCC)n Simple_repeat Simple_repeat 4 40 0 212 305 49 12 chr20 60890010 60890092 -11263790 - L2 LINE L2 -36 3277 3193 272 321 30 15 chr20 60890711 60890845 -11263037 - L2 LINE L2 0 3272 3137 314 67 0 0 chr20 60890854 60890899 -11262983 - Alu SINE Alu 0 302 258 2115 112 28 0 chr20 60891521 60891807 -11262075 + AluSx SINE Alu 1 294 -18 516 260 42 23 chr20 60892140 60892351 -11261531 + MIR SINE MIR 52 261 -1 1469 195 0 69 chr20 60892908 60893242 -11260640 + AluJo SINE Alu 1 311 -1 343 297 19 108 chr20 60894558 60894671 -11259211 - MIR SINE MIR -18 244 165 2235 97 3 7 chr20 60894671 60894969 -11258913 - AluSg SINE Alu -13 297 1 343 297 19 108 chr20 60894969 60895114 -11258768 - MIR SINE MIR -97 165 9 371 296 25 91 chr20 60895694 60895801 -11258081 + MIR SINE MIR 7 119 -143 2251 75 7 42 chr20 60895801 60896108 -11257774 - AluSg SINE Alu -14 296 1 371 296 25 91 chr20 60896108 60896274 -11257608 + MIR SINE MIR 119 262 0 657 211 6 19 chr20 60896323 60896484 -11257398 - MER33 DNA MER1_type 0 363 205 188 167 128 0 chr20 60896486 60896642 -11257240 + (CATAT)n Simple_repeat Simple_repeat 3 178 0 297 186 81 24 chr20 60896660 60896784 -11257098 + (CATAT)n Simple_repeat Simple_repeat 3 133 0 211 148 16 16 chr20 60896790 60896851 -11257031 + (TATAA)n Simple_repeat Simple_repeat 2 62 0 568 239 38 19 chr20 60896860 60897019 -11256863 - MER33 DNA MER1_type -162 162 1 598 223 62 104 chr20 60897078 60897387 -11256495 + MER102b DNA MER1_type 44 339 -2 1992 110 11 0 chr20 60897425 60897688 -11256194 + AluSx SINE Alu 38 303 -9 341 310 112 33 chr20 60898165 60898407 -11255475 + MIR SINE MIR 2 262 0 187 328 47 0 chr20 60898895 60898959 -11254923 + L2 LINE L2 2512 2578 -736 988 164 5 82 chr20 60898975 60899182 -11254700 + MER20 DNA MER1_type 26 216 -3 2018 232 39 8 chr20 60899211 60899699 -11254183 + MLT1D LTR MaLR 1 503 -2 312 319 69 14 chr20 60899700 60899844 -11254038 + L2 LINE L2 2696 2847 -467 634 257 13 18 chr20 60899859 60900085 -11253797 - L1MC5 LINE L1 -41 7920 7696 261 0 0 0 chr20 60900202 60900231 -11253651 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 321 263 54 15 chr20 60900456 60900611 -11253271 + L2 LINE L2 2831 2991 -322 244 274 103 17 chr20 60900922 60901039 -11252843 - MIR SINE MIR -19 243 117 976 224 51 58 chr20 60901039 60901334 -11252548 + MLT1E3 LTR MaLR 1 293 -331 1764 145 88 3 chr20 60901381 60901664 -11252218 - AluSx SINE Alu -5 307 1 209 339 69 31 chr20 60902122 60902252 -11251630 + MIR3 SINE MIR 56 190 -18 426 335 58 0 chr20 60902332 60902505 -11251377 + MIR SINE MIR 29 211 -51 22 0 0 0 chr20 60903552 60903574 -11250308 + AT_rich Low_complexity Low_complexity 1 22 0 225 0 0 0 chr20 60904487 60904512 -11249370 + (T)n Simple_repeat Simple_repeat 1 25 0 214 200 0 0 chr20 60905576 60905616 -11248266 + (TA)n Simple_repeat Simple_repeat 2 41 0 289 295 62 62 chr20 60907257 60907386 -11246496 - L2 LINE L2 -15 3257 3129 237 65 0 0 chr20 60907680 60907711 -11246171 + (T)n Simple_repeat Simple_repeat 1 31 0 289 322 56 0 chr20 60908443 60908533 -11245349 - L2 LINE L2 -17 3255 3161 417 289 9 0 chr20 60908691 60908805 -11245077 + MIR SINE MIR 65 179 -83 25 0 0 0 chr20 60908852 60908877 -11245005 + AT_rich Low_complexity Low_complexity 1 25 0 2066 138 0 0 chr20 60909207 60909497 -11244385 - AluSx SINE Alu -22 290 1 183 205 0 0 chr20 60909709 60909748 -11244134 + (TATATG)n Simple_repeat Simple_repeat 4 42 0 378 0 0 0 chr20 60910739 60910781 -11243101 + (TA)n Simple_repeat Simple_repeat 2 43 0 1822 175 0 3 chr20 60910781 60911066 -11242816 - AluJb SINE Alu -28 284 1 325 314 99 8 chr20 60911127 60911248 -11242634 - L2 LINE L2 0 3272 3141 273 152 36 196 chr20 60911289 60911401 -11242481 - MIR SINE MIR -22 240 147 294 298 89 54 chr20 60911440 60911608 -11242274 + MER102a DNA MER1_type 142 315 -15 493 254 113 40 chr20 60911844 60912021 -11241861 + MIR SINE MIR 66 255 -7 25 0 0 0 chr20 60913944 60913969 -11239913 + AT_rich Low_complexity Low_complexity 1 25 0 207 368 43 37 chr20 60914371 60914534 -11239348 + MER5A DNA MER1_type 22 185 -4 432 294 123 11 chr20 60914546 60914733 -11239149 + MER63A DNA MER1_type 1 208 -2 1241 107 254 48 chr20 60915222 60915474 -11238408 - AluSg1 SINE Alu -5 304 1 297 275 156 33 chr20 60915664 60915875 -11238007 + L1MC4 LINE L1 7507 7743 -299 1817 133 3 30 chr20 60915878 60916178 -11237704 + AluSx SINE Alu 21 312 0 238 224 235 33 chr20 60916178 60916350 -11237532 + L1ME4a LINE L1 5840 6052 -69 363 267 0 12 chr20 60916527 60916613 -11237269 + L2 LINE L2 3187 3271 -1 195 100 0 0 chr20 60918480 60918510 -11235372 + (TGAA)n Simple_repeat Simple_repeat 3 32 0 522 184 5 49 chr20 60918565 60918750 -11235132 + GA-rich Low_complexity Low_complexity 4 180 0 1966 64 0 0 chr20 60919003 60919239 -11234643 - AluY SINE Alu -75 236 1 403 308 104 32 chr20 60919470 60919778 -11234104 - L2 LINE L2 -15 3298 2969 519 177 9 35 chr20 60920067 60920180 -11233702 - L1PB4 LINE L1 0 6156 6047 312 230 278 0 chr20 60922861 60922987 -11230895 - MIR SINE MIR -1 261 101 967 207 47 39 chr20 60923036 60923292 -11230590 - ORSL DNA AcHobo -17 258 1 419 286 201 0 chr20 60923329 60923483 -11230399 + MER5A DNA MER1_type 4 188 -1 829 146 0 29 chr20 60923661 60923798 -11230084 + FLAM_C SINE Alu 1 133 -10 2385 107 0 0 chr20 60923860 60924169 -11229713 + AluSc SINE Alu 1 309 0 534 246 87 33 chr20 60924830 60925013 -11228869 + L2 LINE L2 3118 3310 -3 2315 87 10 3 chr20 60925404 60925748 -11228134 + AluSq SINE Alu 1 346 0 191 313 162 0 chr20 60926258 60926357 -11227525 - MIR SINE MIR -108 154 40 195 167 0 0 chr20 60926835 60926877 -11227005 + (TG)n Simple_repeat Simple_repeat 2 43 0 198 103 0 0 chr20 60927089 60927118 -11226764 + (CCTA)n Simple_repeat Simple_repeat 3 31 0 2220 97 0 3 chr20 60927228 60927518 -11226364 - AluSg SINE Alu -21 289 1 192 125 0 0 chr20 60927616 60927648 -11226234 + (TTTTA)n Simple_repeat Simple_repeat 4 35 0 422 270 108 34 chr20 60927799 60927947 -11225935 - MIR SINE MIR -85 177 19 673 250 13 0 chr20 60928052 60928204 -11225678 + MIR SINE MIR 32 185 -77 198 0 0 0 chr20 60928421 60928443 -11225439 + (TAAAAA)n Simple_repeat Simple_repeat 2 23 0 25 0 0 0 chr20 60929139 60929164 -11224718 + AT_rich Low_complexity Low_complexity 1 25 0 259 254 0 0 chr20 60929867 60929934 -11223948 + T-rich Low_complexity Low_complexity 1 67 0 688 193 5 116 chr20 60930178 60930385 -11223497 + MER20 DNA MER1_type 36 219 0 332 340 9 9 chr20 60930651 60930785 -11223097 + MIR SINE MIR 4 137 -71 317 283 23 40 chr20 60930873 60931046 -11222836 + (CATATA)n Simple_repeat Simple_repeat 1 170 0 305 191 71 12 chr20 60931228 60931312 -11222570 - L2 LINE L2 0 3313 3225 188 318 68 34 chr20 60931721 60931809 -11222073 + MER5A DNA MER1_type 44 134 -55 328 182 281 46 chr20 60932083 60932251 -11221631 + MLT1J2 LTR MaLR 249 450 0 748 218 87 24 chr20 60932478 60932684 -11221198 + MER20 DNA MER1_type 1 219 0 300 70 0 0 chr20 60933237 60933280 -11220602 + (CA)n Simple_repeat Simple_repeat 2 44 0 621 333 54 0 chr20 60933342 60933564 -11220318 + MIR SINE MIR 2 235 -27 682 299 79 46 chr20 60933590 60934043 -11219839 + L2 LINE L2 2766 3235 -78 2161 143 0 0 chr20 60934047 60934355 -11219527 - AluSx SINE Alu -4 308 1 848 174 0 0 chr20 60934376 60934508 -11219374 - FLAM_C SINE Alu -11 132 1 181 305 37 24 chr20 60934518 60934600 -11219282 + L2 LINE L2 3231 3313 0 392 276 98 52 chr20 60935512 60935686 -11218196 + MIR SINE MIR 81 262 0 521 109 0 22 chr20 60935695 60935787 -11218095 + (TCCA)n Simple_repeat Simple_repeat 4 93 0 756 191 106 11 chr20 60936158 60936346 -11217536 - MER3 DNA MER1_type -2 207 2 428 264 78 87 chr20 60936476 60936926 -11216956 + L1ME4a LINE L1 5452 5897 -224 1010 224 187 28 chr20 60936927 60937253 -11216629 - MLT1F1 LTR MaLR 0 567 190 1134 0 0 0 chr20 60937253 60937374 -11216508 + L1HS LINE L1 6019 6139 -16 300 27 0 0 chr20 60937374 60937411 -11216471 + (TAAAA)n Simple_repeat Simple_repeat 4 40 0 216 0 0 0 chr20 60937456 60937480 -11216402 + (A)n Simple_repeat Simple_repeat 1 24 0 502 305 26 0 chr20 60937504 60937655 -11216227 - MLT1F1 LTR MaLR -409 184 30 490 299 78 5 chr20 60938778 60938982 -11214900 + MIR SINE MIR 33 251 -11 320 324 155 24 chr20 60938977 60939034 -11214848 + L2 LINE L2 2688 2736 -577 * 2017 155 29 29 chr20 60939034 60939409 -11214473 + THE1C LTR MaLR 1 375 0 320 324 155 24 chr20 60939409 60939690 -11214192 + L2 LINE L2 2736 3065 -248 233 271 17 0 chr20 60939708 60939767 -11214115 + MLT1K LTR MaLR 517 576 -12 1831 143 86 0 chr20 60940087 60940366 -11213516 - AluSx SINE Alu -9 303 1 453 350 127 42 chr20 60940586 60941072 -11212810 + L2 LINE L2 2740 3271 -1 1442 185 0 0 chr20 60941351 60941573 -11212309 - MER58A DNA MER1_type 0 224 3 269 259 23 0 chr20 60941654 60941755 -11212127 + MIR SINE MIR 77 145 -63 561 261 0 12 chr20 60941775 60941936 -11211946 - MER113 DNA MER1_type? -271 250 92 238 305 45 39 chr20 60941936 60942090 -11211792 - L2 LINE L2 -600 2714 2560 751 300 119 29 chr20 60942322 60943058 -11210824 + L2 LINE L2 2518 3313 0 1125 155 0 0 chr20 60943286 60943447 -11210435 + FRAM SINE Alu 5 165 -11 302 320 77 26 chr20 60944236 60944392 -11209490 + MIR SINE MIR 48 211 -51 680 263 132 61 chr20 60944508 60944934 -11208948 - Charlie8 DNA MER1_type -1905 512 57 401 303 55 0 chr20 60945261 60945426 -11208456 + LTR33 LTR ERVL 1 174 -347 259 326 29 7 chr20 60945493 60945631 -11208251 + LTR33 LTR ERVL 366 506 -15 207 0 0 0 chr20 60945779 60945802 -11208080 + (A)n Simple_repeat Simple_repeat 1 23 0 302 358 45 6 chr20 60945993 60946169 -11207713 - MIR SINE MIR -11 251 69 22 35 0 0 chr20 60946433 60946462 -11207420 + AT_rich Low_complexity Low_complexity 1 29 0 1252 265 47 10 chr20 60946713 60947120 -11206762 + MLT1H LTR MaLR 40 541 -8 260 344 16 8 chr20 60947296 60947418 -11206464 + LTR67 LTR ERVL 428 550 -7 359 314 57 61 chr20 60947801 60948046 -11205836 + L2 LINE L2 2927 3170 -102 252 318 100 0 chr20 60948243 60948353 -11205529 + Charlie8 DNA MER1_type 95 215 -2202 579 217 0 0 chr20 60948378 60948530 -11205352 + (TTAGGG)n Simple_repeat Simple_repeat 3 154 0 417 202 30 20 chr20 60948659 60948758 -11205124 - MER104 DNA Tc2 -67 113 14 849 275 62 28 chr20 60949125 60949449 -11204433 + MER46C DNA MER2_type 4 338 0 432 171 38 0 chr20 60950099 60950204 -11203678 + CT-rich Low_complexity Low_complexity 3 111 0 216 0 0 0 chr20 60950216 60950240 -11203642 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 720 142 9 0 chr20 60950283 60950396 -11203486 - MER58 DNA MER1_type -20 2400 2287 463 257 40 0 chr20 60950391 60950492 -11203390 - MER58 DNA MER1_type -236 105 1 * 801 264 67 5 chr20 60950607 60950815 -11203067 + MIR SINE MIR 13 233 -29 986 234 23 0 chr20 60952404 60952618 -11201264 - MER20 DNA MER1_type 0 219 1 2023 122 4 0 chr20 60952841 60953149 -11200733 + AluSg SINE Alu 1 309 0 239 230 0 68 chr20 60954820 60954894 -11198988 + MLT1K LTR MaLR 446 514 -74 218 338 25 0 chr20 60954928 60955008 -11198874 - MIR SINE MIR -37 225 144 1411 251 23 6 chr20 60955117 60955467 -11198415 + LTR16C LTR ERVL 136 491 0 32 0 0 0 chr20 60955988 60956020 -11197862 + AT_rich Low_complexity Low_complexity 1 32 0 827 251 74 4 chr20 60956115 60956358 -11197524 + MIR SINE MIR 3 262 0 4400 128 8 65 chr20 60956363 60957096 -11196786 + LTR8 LTR ERV1 1 691 0 2377 54 4 0 chr20 60957141 60957447 -11196435 - AluY SINE Alu 0 307 1 738 226 125 93 chr20 60958359 60958767 -11195115 + MLT1K LTR MaLR 151 571 -17 2553 55 0 0 chr20 60960293 60960586 -11193296 - AluY SINE Alu -18 293 1 215 143 52 52 chr20 60960600 60960677 -11193205 + (TTATA)n Simple_repeat Simple_repeat 2 78 0 501 235 29 22 chr20 60960696 60960832 -11193050 + L2 LINE L2 3136 3272 0 365 352 55 0 chr20 60961521 60961666 -11192216 - L2 LINE L2 -3 3269 3117 2455 65 0 10 chr20 60962438 60962744 -11191138 - AluY SINE Alu -8 303 1 292 224 91 73 chr20 60962802 60962967 -11190915 + MER113 DNA MER1_type? 1 168 -353 200 350 57 41 chr20 60963054 60963300 -11190582 - L2 LINE L2 -586 2728 2479 275 331 38 12 chr20 60964230 60964390 -11189492 + MIR SINE MIR 91 254 -8 1843 134 187 28 chr20 60964522 60964880 -11189002 + MSTC LTR MaLR 1 415 -13 1671 156 3 35 chr20 60964933 60965246 -11188636 + AluJo SINE Alu 3 306 0 994 275 65 11 chr20 60965277 60965689 -11188193 + L1MD2 LINE L1 5740 6151 -15 501 84 0 0 chr20 60965799 60965870 -11188012 + (TG)n Simple_repeat Simple_repeat 2 72 0 182 230 0 34 chr20 60966688 60966744 -11187138 - MIR SINE MIR -113 149 98 23 54 0 0 chr20 60967209 60967246 -11186636 + AT_rich Low_complexity Low_complexity 1 37 0 1736 113 120 8 chr20 60968260 60968526 -11185356 + AluSg SINE Alu 1 296 -14 252 289 0 22 chr20 60968828 60968918 -11184964 + CT-rich Low_complexity Low_complexity 1 88 0 296 298 39 0 chr20 60969899 60970003 -11183879 - MIR SINE MIR -118 144 37 209 326 21 11 chr20 60970041 60970136 -11183746 - MIR SINE MIR -165 97 2 1845 166 0 7 chr20 60970206 60970496 -11183386 - AluSx SINE Alu -24 288 1 209 83 28 0 chr20 60970570 60970606 -11183276 + (TTTTC)n Simple_repeat Simple_repeat 3 39 0 430 135 0 0 chr20 60971487 60971561 -11182321 + L1MA3 LINE L1 6232 6305 0 236 227 0 0 chr20 60971590 60971634 -11182248 - MER113 DNA MER1_type? -477 44 1 394 326 59 0 chr20 60971672 60971911 -11181971 - L1ME LINE L1 -352 5769 5517 2215 111 0 0 chr20 60971917 60972206 -11181676 + AluSg SINE Alu 1 289 -21 494 310 18 22 chr20 60972964 60973193 -11180689 + MIR SINE MIR 29 256 -6 417 324 52 55 chr20 60973191 60973290 -11180592 + L2 LINE L2 2970 3068 -245 * 649 206 0 16 chr20 60973290 60973416 -11180466 - FLAM_C SINE Alu -9 124 1 417 324 52 55 chr20 60973416 60973659 -11180223 + L2 LINE L2 3068 3311 -2 289 256 35 0 chr20 60973749 60973835 -11180047 + CT-rich Low_complexity Low_complexity 3 91 0 1742 231 39 9 chr20 60974819 60975252 -11178630 + Charlie4a DNA MER1_type 63 508 0 658 281 20 10 chr20 60975350 60975546 -11178336 - MIR SINE MIR -21 241 44 383 277 7 47 chr20 60975644 60975792 -11178090 - MIR SINE MIR -50 212 71 1155 167 48 0 chr20 60975794 60975980 -11177902 + MER58A DNA MER1_type 28 222 -2 302 297 97 38 chr20 60976016 60976201 -11177681 + MIR SINE MIR 66 261 -1 261 359 75 13 chr20 60976953 60977112 -11176770 + MIR SINE MIR 2 170 -92 322 230 86 99 chr20 60977414 60977636 -11176246 + MLT1H LTR MaLR 330 548 -1 1837 172 0 7 chr20 60978525 60978833 -11175049 - AluJb SINE Alu -6 306 1 686 257 76 56 chr20 60979064 60979352 -11174530 + MER102b DNA MER1_type 1 294 -47 1116 243 70 3 chr20 60981051 60981351 -11172531 - MER33 DNA MER1_type -4 320 1 2135 147 96 10 chr20 60981678 60982072 -11171810 + MSTA LTR MaLR 1 428 0 1207 239 50 65 chr20 60982072 60982515 -11171367 + LTR16A1 LTR ERVL 22 457 0 433 357 146 9 chr20 60983161 60983503 -11170379 + L2 LINE L2 2925 3313 0 787 205 49 148 chr20 60983619 60984024 -11169858 + MLT1A1 LTR MaLR 1 365 0 283 175 0 63 chr20 60984706 60984769 -11169113 - MIR SINE MIR -99 163 105 275 297 144 65 chr20 60985048 60985246 -11168636 + L2 LINE L2 2932 3113 -200 2805 93 0 6 chr20 60985246 60985610 -11168272 - THE1B LTR MaLR 0 364 3 275 297 144 65 chr20 60985610 60985765 -11168117 + L2 LINE L2 3113 3313 0 373 315 63 16 chr20 60986334 60986560 -11167322 - MIR SINE MIR -5 257 18 942 191 0 35 chr20 60986723 60986896 -11166986 - FRAM SINE Alu -6 170 4 1627 168 53 33 chr20 60988023 60988326 -11165556 + AluJb SINE Alu 1 309 -3 1103 191 127 153 chr20 60988472 60989073 -11164809 + MER45C DNA AcHobo 27 611 -342 900 224 242 6 chr20 60989191 60989521 -11164361 + MLT1I LTR MaLR 2 409 0 181 356 0 0 chr20 60989543 60989602 -11164280 + L2 LINE L2 3214 3272 0 195 207 83 83 chr20 60989902 60990023 -11163859 + L2 LINE L2 2286 2406 -908 216 0 0 0 chr20 60990088 60990112 -11163770 + (TTTTA)n Simple_repeat Simple_repeat 1 24 0 414 290 93 58 chr20 60990651 60990920 -11162962 - Charlie8 DNA MER1_type -2127 290 1 219 36 0 0 chr20 60990931 60990959 -11162923 + (AGCTG)n Simple_repeat Simple_repeat 4 31 0 256 200 71 0 chr20 60991560 60991630 -11162252 - MIR SINE MIR -19 243 169 931 166 55 11 chr20 61092022 61092203 -11061679 + MER5A DNA MER1_type 1 189 0 249 194 32 48 chr20 61093123 61093185 -11060697 - MSTC LTR MaLR -349 79 19 2102 123 3 7 chr20 61093187 61093488 -11060394 - AluSx SINE Alu -10 302 3 836 320 104 21 chr20 61094300 61094861 -11059021 - L2 LINE L2 0 3313 2705 1885 122 3 67 chr20 61094861 61095190 -11058692 - AluSx SINE Alu -4 308 1 836 320 104 21 chr20 61095190 61095266 -11058616 - L2 LINE L2 -608 2705 2637 1156 174 58 5 chr20 61095606 61095813 -11058069 + MER20 DNA MER1_type 1 218 -1 2166 119 0 0 chr20 61095949 61096234 -11057648 + AluSx SINE Alu 1 285 -27 788 328 73 35 chr20 61096992 61097709 -11056173 - L2 LINE L2 -2 3311 2560 279 315 66 47 chr20 61098377 61098590 -11055292 - MER102b DNA MER1_type -1 340 124 1737 152 61 6 chr20 61098837 61099166 -11054716 - MLT1A1 LTR MaLR -18 347 1 380 242 42 0 chr20 61099868 61099963 -11053919 - MER5A DNA MER1_type -77 112 14 21 0 0 0 chr20 61100240 61100261 -11053621 + AT_rich Low_complexity Low_complexity 1 21 0 426 291 36 64 chr20 61100278 61100498 -11053384 - MIR SINE MIR -10 252 39 369 212 329 14 chr20 61101098 61101244 -11052638 + MIR SINE MIR 1 192 -70 778 297 0 50 chr20 61101537 61101796 -11052086 - MIR SINE MIR -6 256 11 22 35 0 0 chr20 61102012 61102041 -11051841 + AT_rich Low_complexity Low_complexity 1 29 0 219 313 144 10 chr20 61102429 61102630 -11051252 + L2 LINE L2 1533 1760 -1554 1221 202 41 23 chr20 61103214 61103556 -11050326 - L1MA9 LINE L1 -39 6273 5926 313 287 89 79 chr20 61103740 61104043 -11049839 - HAL1 LINE L1 -966 1541 1236 475 176 101 8 chr20 61104116 61104235 -11049647 - MLT1D LTR MaLR -366 139 10 439 275 22 33 chr20 61104433 61104615 -11049267 + CT-rich Low_complexity Low_complexity 1 180 0 2109 126 0 0 chr20 61104831 61105125 -11048757 + AluSx SINE Alu 1 294 -18 180 0 0 0 chr20 61106151 61106171 -11047711 + (CAG)n Simple_repeat Simple_repeat 3 22 0 716 310 30 17 chr20 61106233 61106611 -11047271 - LTR16A1 LTR ERVL -6 476 88 35 24 0 0 chr20 61106843 61106885 -11046997 + AT_rich Low_complexity Low_complexity 1 42 0 646 228 44 114 chr20 61106901 61107073 -11046809 - L2 LINE L2 0 3313 3169 2365 149 18 50 chr20 61107073 61107575 -11046307 + MER66B LTR ERV1 1 486 0 646 228 44 114 chr20 61107575 61107700 -11046182 - L2 LINE L2 -144 3169 3037 371 285 146 0 chr20 61108695 61108818 -11045064 + MIR SINE MIR 35 175 -87 4975 194 84 31 chr20 61108818 61110181 -11043701 + Charlie1a DNA MER1_type 21 1455 0 851 285 37 20 chr20 61110290 61110536 -11043346 - MIR SINE MIR 0 262 13 545 196 8 105 chr20 61110876 61111009 -11042873 - MER45A DNA AcHobo 0 178 59 228 111 0 0 chr20 61112873 61112909 -11040973 + (T)n Simple_repeat Simple_repeat 1 36 0 183 80 0 0 chr20 61112963 61112988 -11040894 + (T)n Simple_repeat Simple_repeat 1 25 0 275 273 151 85 chr20 61113166 61113485 -11040397 + L2 LINE L2 2812 3151 -121 221 231 0 0 chr20 61113500 61113539 -11040343 + polypyrimidine Low_complexity Low_complexity 1 39 0 671 336 68 8 chr20 61113624 61114094 -11039788 + LTR33 LTR ERVL 21 518 -3 237 309 48 0 chr20 61114151 61114235 -11039647 + L2 LINE L2 3178 3265 -7 387 311 0 50 chr20 61114932 61115093 -11038789 - MIR SINE MIR -18 244 92 237 33 0 0 chr20 61115767 61115797 -11038085 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 1073 200 44 0 chr20 61116064 61116269 -11037613 - MER20 DNA MER1_type -5 214 1 400 323 90 7 chr20 61116563 61116718 -11037164 - MIR SINE MIR -62 200 33 281 280 237 0 chr20 61117080 61117173 -11036709 + L2 LINE L2 3158 3272 0 523 115 0 0 chr20 61117337 61117415 -11036467 + L1MA5A LINE L1 6219 6296 -1 1341 249 31 29 chr20 61117520 61117998 -11035884 - MER113 DNA MER1_type? -42 479 1 247 349 95 7 chr20 61118007 61118208 -11035674 + MIR SINE MIR 33 248 -14 300 288 161 36 chr20 61119167 61119441 -11034441 - MLT1J LTR MaLR -40 471 164 1860 146 0 44 chr20 61119765 61120080 -11033802 + AluJb SINE Alu 5 305 -7 519 253 26 7 chr20 61120269 61120423 -11033459 + L1ME3A LINE L1 5795 5951 -219 468 274 53 67 chr20 61120708 61120993 -11032889 - MER102b DNA MER1_type -11 330 50 777 149 5 158 chr20 61121492 61121714 -11032168 + MER20 DNA MER1_type 31 218 -1 487 249 117 42 chr20 61122329 61122542 -11031340 + MIR SINE MIR 9 237 -25 467 268 42 21 chr20 61122976 61123118 -11030764 + MIR SINE MIR 118 262 0 2405 123 36 22 chr20 61123463 61123822 -11030060 - THE1B LTR MaLR 0 364 1 811 163 82 65 chr20 61123891 61124001 -11029881 - MER5A DNA MER1_type 0 189 73 2281 106 0 0 chr20 61124001 61124302 -11029580 - AluSx SINE Alu -11 301 1 811 163 82 65 chr20 61124302 61124375 -11029507 - MER5A DNA MER1_type -116 73 3 969 202 129 0 chr20 61124385 61124578 -11029304 - MER20 DNA MER1_type 0 219 2 446 321 69 14 chr20 61124578 61124796 -11029086 + MIR SINE MIR 30 259 -3 493 258 72 25 chr20 61125779 61126014 -11027868 - MIR SINE MIR -7 255 6 195 323 21 43 chr20 61126023 61126116 -11027766 - MIR3 SINE MIR -31 177 87 837 286 115 17 chr20 61126399 61126755 -11027127 - L2 LINE L2 0 3313 2923 479 181 105 38 chr20 61126767 61126900 -11026982 - L1MC/D LINE L1 -753 5413 5296 976 51 34 23 chr20 61126900 61126938 -11026944 + (TTC)n Simple_repeat Simple_repeat 1 215 0 976 51 34 23 chr20 61126938 61127113 -11026769 + (TTC)n Simple_repeat Simple_repeat 2 178 0 1808 159 0 21 chr20 61127253 61127543 -11026339 - AluJb SINE Alu -28 284 1 459 225 167 0 chr20 61127547 61127685 -11026197 - L1MC/D LINE L1 -907 5239 5079 262 371 46 13 chr20 61127965 61128116 -11025766 + MIR3 SINE MIR 42 197 -11 361 261 0 108 chr20 61128149 61128213 -11025669 - MER96 DNA MER1_type? 0 175 130 2227 84 17 7 chr20 61128213 61128509 -11025373 + AluSc SINE Alu 1 299 -10 361 261 0 108 chr20 61128509 61128574 -11025308 - MER96 DNA MER1_type? -45 130 60 428 196 33 0 chr20 61128764 61128856 -11025026 - MER5A DNA MER1_type -83 106 12 1775 158 50 0 chr20 61128958 61129255 -11024627 - AluSx SINE Alu 0 312 1 1112 297 49 61 chr20 61129612 61129921 -11023961 + MLT1K LTR MaLR 3 303 -285 1146 214 19 23 chr20 61129921 61130183 -11023699 - MIR SINE MIR 0 262 2 1112 297 49 61 chr20 61130183 61130466 -11023416 + MLT1K LTR MaLR 303 588 0 309 277 0 0 chr20 61130468 61130533 -11023349 + MIR SINE MIR 84 148 -60 372 267 14 55 chr20 61130689 61130835 -11023047 + L2 LINE L2 3164 3303 -10 2337 98 3 0 chr20 61131421 61131716 -11022166 + AluSp SINE Alu 1 296 -17 576 249 42 42 chr20 61131962 61132019 -11021863 + MIR SINE MIR 63 119 -143 225 0 0 0 chr20 61132019 61132044 -11021838 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 576 249 42 42 chr20 61132044 61132151 -11021731 + MIR SINE MIR 118 227 -35 1189 180 18 31 chr20 61132151 61132373 -11021509 + MER20 DNA MER1_type 1 219 0 551 231 16 0 chr20 61132422 61132543 -11021339 + L2 LINE L2 3191 3313 0 312 211 101 18 chr20 61132641 61132750 -11021132 + MLT1J LTR MaLR 287 404 -107 5440 119 20 0 chr20 61133130 61133920 -11019962 + L1PA13 LINE L1 5354 6159 -4 183 333 21 43 chr20 61134064 61134157 -11019725 - L2 LINE L2 -1123 2191 2101 1560 147 14 46 chr20 61134247 61134532 -11019350 - AluJo SINE Alu -17 295 20 245 289 56 0 chr20 61134630 61134720 -11019162 + MIR SINE MIR 160 254 -8 2317 102 0 3 chr20 61134743 61135048 -11018834 + AluSc SINE Alu 1 304 -5 1686 189 96 10 chr20 61135285 61135702 -11018180 + L1MB8 LINE L1 5726 6178 0 2376 70 10 7 chr20 61136692 61136992 -11016890 + AluY SINE Alu 1 301 -10 23 33 0 0 chr20 61138114 61138144 -11015738 + AT_rich Low_complexity Low_complexity 1 30 0 630 196 162 14 chr20 61138183 61138331 -11015551 - MER5A DNA MER1_type 0 189 20 309 100 0 0 chr20 61138659 61138709 -11015173 + (CA)n Simple_repeat Simple_repeat 1 50 0 478 277 45 50 chr20 61139095 61139337 -11014545 + L1ME LINE L1 5572 5812 -309 348 293 61 57 chr20 61139623 61139824 -11014058 + MIR SINE MIR 14 212 -50 23 0 0 0 chr20 61140421 61140444 -11013438 + AT_rich Low_complexity Low_complexity 1 23 0 209 116 0 23 chr20 61140714 61140741 -11013141 + (TGAA)n Simple_repeat Simple_repeat 1 28 -14 2377 102 0 6 chr20 61140741 61141055 -11012827 + AluSx SINE Alu 1 312 0 209 116 0 23 chr20 61141055 61141070 -11012812 + (TGAA)n Simple_repeat Simple_repeat 28 42 0 399 83 0 0 chr20 61141320 61141380 -11012502 + (TA)n Simple_repeat Simple_repeat 2 61 0 363 44 0 0 chr20 61142198 61142243 -11011639 + (TG)n Simple_repeat Simple_repeat 2 46 0 431 70 0 0 chr20 61142369 61142426 -11011456 - MER53 DNA DNA 0 189 133 1354 95 16 16 chr20 61142427 61142616 -11011266 - AluSg/x SINE Alu -17 295 107 434 176 29 103 chr20 61142618 61142677 -11011205 - MER53 DNA DNA -62 127 65 1766 166 14 14 chr20 61142677 61142972 -11010910 + AluJb SINE Alu 1 295 -17 434 176 29 103 chr20 61142972 61143048 -11010834 - MER53 DNA DNA -124 65 2 316 238 25 12 chr20 61143679 61143759 -11010123 - MIR SINE MIR -105 157 77 258 172 17 50 chr20 61143759 61143826 -11010056 - MLT2D LTR ERVL 0 414 358 249 139 0 0 chr20 61143855 61143898 -11009984 + (TG)n Simple_repeat Simple_repeat 1 43 0 700 183 5 102 chr20 61143920 61144106 -11009776 - MLT2D LTR ERVL -17 397 230 307 114 0 100 chr20 61144157 61144199 -11009683 - MLT2D LTR ERVL -2 518 484 492 62 0 0 chr20 61144199 61144263 -11009619 + (TCTA)n Simple_repeat Simple_repeat 1 64 0 307 114 0 100 chr20 61144263 61144290 -11009592 - MLT2D LTR ERVL -36 484 456 275 191 0 11 chr20 61144307 61144396 -11009486 + (TA)n Simple_repeat Simple_repeat 1 88 0 2231 152 10 38 chr20 61144417 61144812 -11009070 - MLT2D LTR ERVL -17 397 14 327 269 75 65 chr20 61145018 61145219 -11008663 - L1ME3A LINE L1 -2 6168 5966 899 157 84 39 chr20 61145226 61145404 -11008478 + MER58A DNA MER1_type 37 222 -2 1472 246 98 66 chr20 61145507 61146299 -11007583 - L1MC5 LINE L1 -434 7527 6710 2732 103 6 0 chr20 61146302 61146660 -11007222 + L1PA15 LINE L1 5794 6153 -12 256 209 30 0 chr20 61146675 61146742 -11007140 + L1MC4 LINE L1 6624 6692 -1350 271 122 0 82 chr20 61146744 61146793 -11007089 - MLT1A1 LTR MaLR -320 45 1 421 250 98 83 chr20 61146882 61147410 -11006472 - HAL1b LINE L1 -752 596 61 25 0 0 0 chr20 61147410 61147435 -11006447 + AT_rich Low_complexity Low_complexity 1 25 0 1092 55 0 0 chr20 61147837 61147965 -11005917 - L1PA5 LINE L1 -4 6150 6023 970 204 17 17 chr20 61148591 61148772 -11005110 - MLT1E2 LTR MaLR 0 626 446 450 187 56 111 chr20 61148788 61148986 -11004896 - MLT1E2 LTR MaLR -439 187 1 323 219 62 52 chr20 61148991 61149087 -11004795 - L2 LINE L2 0 3272 3176 557 255 19 32 chr20 61150048 61150205 -11003677 - L2 LINE L2 0 3313 3159 389 332 114 18 chr20 61150599 61150879 -11003003 + L2 LINE L2 3006 3312 -1 230 178 0 22 chr20 61150985 61151030 -11002852 - MIR SINE MIR 0 262 219 333 331 45 32 chr20 61151072 61151229 -11002653 - MIR SINE MIR -15 247 89 923 293 108 54 chr20 61151561 61152097 -11001785 + MLT1K LTR MaLR 16 610 -5 386 236 75 80 chr20 61152125 61152498 -11001384 - MLT1J1 LTR MaLR -7 443 66 373 343 20 0 chr20 61152941 61153040 -11000842 - L2 LINE L2 -9 3263 3163 956 195 17 0 chr20 61153842 61154016 -10999866 + MER58A DNA MER1_type 47 223 -1 2352 83 3 10 chr20 61154415 61154728 -10999154 - AluY SINE Alu 0 311 1 1337 161 25 0 chr20 61154785 61155027 -10998855 - L1MA8 LINE L1 0 6291 6044 447 223 58 22 chr20 61155491 61155630 -10998252 - MIR SINE MIR 0 262 119 913 211 26 82 chr20 61155668 61155900 -10997982 + MER20 DNA MER1_type 1 219 0 389 322 33 28 chr20 61157379 61157559 -10996323 + L2 LINE L2 2619 2799 -515 320 157 7 36 chr20 61157562 61157644 -10996238 - MLT2B2 LTR ERVL 0 520 435 2758 161 26 11 chr20 61157662 61158129 -10995753 - MLT2B2 LTR ERVL -35 480 7 242 168 54 6 chr20 61158486 61158653 -10995229 + (TA)n Simple_repeat Simple_repeat 1 175 0 343 151 50 0 chr20 61158676 61158835 -10995047 + (TA)n Simple_repeat Simple_repeat 1 167 0 25 51 0 0 chr20 61158835 61158874 -10995008 + AT_rich Low_complexity Low_complexity 1 39 0 231 235 0 0 chr20 61158908 61158959 -10994923 + (TA)n Simple_repeat Simple_repeat 1 51 0 297 0 0 0 chr20 61159868 61159901 -10993981 + (TG)n Simple_repeat Simple_repeat 1 33 0 254 211 40 53 chr20 61161434 61161510 -10992372 + L2 LINE L2 2982 3056 -257 997 223 87 0 chr20 61161566 61161772 -10992110 - MER58A DNA MER1_type 0 224 1 449 288 62 62 chr20 61163544 61163850 -10990032 + MLT1K LTR MaLR 281 586 -2 3676 159 24 40 chr20 61164198 61165028 -10988854 - pTR5 LTR ERV1 0 2468 1520 853 187 43 55 chr20 61165096 61165353 -10988529 - pTR5 LTR ERV1 -1442 996 743 1927 153 0 10 chr20 61165461 61165756 -10988126 + AluJb SINE Alu 1 292 -20 241 287 118 37 chr20 61165757 61165893 -10987989 - MLT1K LTR MaLR -328 260 114 575 299 72 14 chr20 61166036 61166257 -10987625 - MIR SINE MIR -14 248 15 816 200 60 60 chr20 61166258 61166353 -10987529 + MER58A DNA MER1_type 5 99 -2321 2230 114 13 7 chr20 61166353 61166661 -10987221 - AluSg SINE Alu 0 310 1 816 200 60 60 chr20 61166661 61166780 -10987102 + MER58A DNA MER1_type 98 219 -5 267 237 54 75 chr20 61166998 61167091 -10986791 + LTR67 LTR ERVL 98 188 -369 218 273 102 64 chr20 61167667 61167854 -10986028 - L2 LINE L2 -93 3220 3027 282 29 0 0 chr20 61168059 61168094 -10985788 + (TG)n Simple_repeat Simple_repeat 2 36 0 287 297 55 93 chr20 61169050 61169232 -10984650 + MIR SINE MIR 16 190 -72 618 128 13 34 chr20 61169491 61169640 -10984242 + GA-rich Low_complexity Low_complexity 3 148 0 1264 164 129 27 chr20 61170432 61170688 -10983194 + AluSx SINE Alu 1 282 -30 189 0 0 0 chr20 61170694 61170715 -10983167 + (TC)n Simple_repeat Simple_repeat 2 22 0 * 219 139 0 0 chr20 61170714 61170750 -10983132 + (TA)n Simple_repeat Simple_repeat 1 36 0 452 181 16 20 chr20 61170882 61170991 -10982891 - L1ME3 LINE L1 -4 6162 6046 369 309 56 25 chr20 61170992 61171154 -10982728 + MER58C DNA MER1_type 1 167 -48 2570 154 9 48 chr20 61171419 61171964 -10981918 - L1MB5 LINE L1 -8 6166 5643 2034 122 3 3 chr20 61172112 61172399 -10981483 + AluSg SINE Alu 1 287 -23 183 42 0 0 chr20 61172411 61172435 -10981447 + (CAA)n Simple_repeat Simple_repeat 2 25 0 617 173 167 0 chr20 61172656 61172818 -10981064 - MER53 DNA DNA 0 189 1 1493 160 147 16 chr20 61174292 61174598 -10979284 + MER7A DNA MER2_type 3 346 0 218 32 32 0 chr20 61175814 61175845 -10978037 + (CA)n Simple_repeat Simple_repeat 2 33 0 575 248 23 64 chr20 61176324 61176542 -10977340 - L2 LINE L2 -9 3304 3096 199 205 0 0 chr20 61176556 61176595 -10977287 + L2 LINE L2 3272 3310 -3 601 227 7 40 chr20 61177375 61177525 -10976357 - Charlie8 DNA MER1_type -2233 184 40 995 224 62 55 chr20 61177583 61178003 -10975879 - L1MC5 LINE L1 -387 7574 7152 22 35 0 0 chr20 61178031 61178060 -10975822 + AT_rich Low_complexity Low_complexity 1 29 0 452 246 183 21 chr20 61178437 61178579 -10975303 - MIR SINE MIR -34 228 64 565 310 117 42 chr20 61180600 61181016 -10972866 + L2 LINE L2 2621 3070 -243 228 345 0 25 chr20 61181333 61181452 -10972430 + MLT1H1 LTR MaLR 1 116 -439 242 274 178 48 chr20 61181686 61181832 -10972050 + MLT1H LTR MaLR 367 531 -18 521 281 177 5 chr20 61182149 61182341 -10971541 - MIR SINE MIR 0 262 38 440 291 60 28 chr20 61182624 61182806 -10971076 - MIR SINE MIR -28 234 47 3562 128 6 9 chr20 61183234 61183763 -10970119 + MER1A DNA MER1_type 1 527 0 222 225 0 180 chr20 61184167 61184256 -10969626 + MIR3 SINE MIR 3 75 -133 244 322 0 11 chr20 61184382 61184469 -10969413 + MIR SINE MIR 82 167 -95 785 308 55 22 chr20 61184687 61185139 -10968743 - MLT1J LTR MaLR -44 467 1 252 122 0 0 chr20 61185339 61185380 -10968502 + (TG)n Simple_repeat Simple_repeat 2 42 0 23 0 0 0 chr20 61186329 61186352 -10967530 + AT_rich Low_complexity Low_complexity 1 23 0 989 176 57 24 chr20 61186988 61187198 -10966684 + MER20 DNA MER1_type 3 219 0 693 307 71 13 chr20 61187255 61187480 -10966402 + MIR SINE MIR 23 260 -2 2471 84 0 0 chr20 61187609 61187919 -10965963 + AluY SINE Alu 1 310 -1 571 311 87 16 chr20 61188320 61188686 -10965196 - MLT1J2 LTR MaLR 0 450 59 283 333 49 10 chr20 61190082 61190184 -10963698 + MIR SINE MIR 20 125 -137 34 42 0 0 chr20 61190370 61190418 -10963464 + AT_rich Low_complexity Low_complexity 1 48 0 265 314 112 61 chr20 61190643 61191153 -10962729 + L1MEd LINE L1 255 790 -5329 1701 231 98 28 chr20 61191322 61191792 -10962090 - MLT1F1 LTR MaLR 0 567 55 2709 111 26 19 chr20 61191792 61192217 -10961665 - MSTA LTR MaLR 0 428 1 1701 231 98 28 chr20 61192217 61192274 -10961608 - MLT1F1 LTR MaLR -512 55 3 731 75 19 0 chr20 61192420 61192526 -10961356 + (TATATG)n Simple_repeat Simple_repeat 4 111 0 404 227 100 27 chr20 61192565 61192675 -10961207 - MIR SINE MIR -20 242 125 471 292 9 0 chr20 61193249 61193362 -10960520 - L2 LINE L2 -6 3266 3153 602 260 21 31 chr20 61194938 61195060 -10958822 + MIR SINE MIR 73 194 -68 2353 93 50 19 chr20 61195060 61195424 -10958458 + THE1C LTR MaLR 1 375 0 602 260 21 31 chr20 61195424 61195493 -10958389 + MIR SINE MIR 194 262 0 305 258 11 11 chr20 61196828 61196917 -10956965 - MIR SINE MIR -10 252 164 426 301 93 51 chr20 61196922 61197158 -10956724 + MIR SINE MIR 1 246 -16 576 241 0 0 chr20 61197183 61197291 -10956591 - MIR SINE MIR -109 153 46 428 210 10 0 chr20 61198677 61198777 -10955105 - MER20 DNA MER1_type 0 219 119 208 316 197 35 chr20 61199207 61199399 -10954483 - L2 LINE L2 -93 3220 2984 1014 210 14 14 chr20 61199399 61199618 -10954264 + MER20 DNA MER1_type 1 219 0 208 316 197 35 chr20 61199618 61199653 -10954229 - L2 LINE L2 -329 2984 2956 268 288 14 0 chr20 61200124 61200197 -10953685 + MIR3 SINE MIR 126 199 -9 204 175 25 0 chr20 61201261 61201301 -10952581 + (TA)n Simple_repeat Simple_repeat 2 42 0 349 226 0 43 chr20 61201301 61201394 -10952488 - L1MC4 LINE L1 -1340 6702 6614 260 137 20 0 chr20 61201439 61201490 -10952392 + (TA)n Simple_repeat Simple_repeat 1 52 0 276 261 0 0 chr20 61201582 61201674 -10952208 + (TA)n Simple_repeat Simple_repeat 1 92 0 325 282 56 14 chr20 61201898 61202040 -10951842 - MLT1J LTR MaLR -118 393 246 1379 202 125 109 chr20 61202168 61202380 -10951502 - MLT1E1 LTR MaLR -4 650 443 1664 155 7 37 chr20 61202380 61202676 -10951206 - AluJo SINE Alu -25 287 1 1379 202 125 109 chr20 61202676 61202881 -10951001 - MLT1E1 LTR MaLR -211 443 243 2321 91 7 3 chr20 61202881 61203188 -10950694 - AluSx SINE Alu -4 308 1 1379 202 125 109 chr20 61203188 61203403 -10950479 - MLT1E1 LTR MaLR -411 243 7 183 289 0 0 chr20 61203583 61203635 -10950247 - L2 LINE L2 0 3313 3262 454 280 73 21 chr20 61203637 61203812 -10950070 + MIR SINE MIR 2 180 -63 446 277 178 8 chr20 61204625 61204867 -10949015 - L1MC4 LINE L1 -1827 5981 5699 190 311 115 0 chr20 61205007 61205068 -10948814 - L2 LINE L2 0 3313 3246 392 212 50 0 chr20 61206540 61206639 -10947243 + L1MDa LINE L1 1 104 -6436 507 190 30 27 chr20 61206666 61207210 -10946672 + (TATATG)n Simple_repeat Simple_repeat 1 545 0 1738 257 95 21 chr20 61207220 61207828 -10946054 + L1MDa LINE L1 124 776 -5764 1002 165 89 5 chr20 61207847 61208071 -10945811 + L1MD1 LINE L1 6000 6242 0 184 283 0 19 chr20 61208128 61208181 -10945701 - L2 LINE L2 0 3313 3262 272 293 17 9 chr20 61209419 61209535 -10944347 - MER103 DNA DNA -49 117 1 317 250 85 113 chr20 61209800 61210012 -10943870 - MER102b DNA MER1_type -31 310 105 1528 199 10 20 chr20 61210030 61210193 -10943689 - AluJb SINE Alu -13 299 139 2363 93 6 6 chr20 61210193 61210505 -10943377 - AluSq SINE Alu -1 312 1 1528 199 10 20 chr20 61210505 61210643 -10943239 - AluJb SINE Alu -173 139 1 344 262 24 0 chr20 61210699 61210867 -10943015 + (TA)n Simple_repeat Simple_repeat 2 173 0 22 56 0 0 chr20 61210971 61211007 -10942875 + AT_rich Low_complexity Low_complexity 1 36 0 1667 158 41 10 chr20 61211693 61211808 -10942074 + AluJo SINE Alu 9 119 -193 414 0 0 0 chr20 61211808 61211854 -10942028 + (TAA)n Simple_repeat Simple_repeat 3 48 0 1667 158 41 10 chr20 61211854 61212029 -10941853 + AluJo SINE Alu 119 308 -4 555 216 99 89 chr20 61212054 61212267 -10941615 + MER20 DNA MER1_type 1 215 -4 203 274 0 65 chr20 61212675 61212737 -10941145 - L2 LINE L2 -65 3248 3191 1089 234 5 14 chr20 61212743 61212965 -10940917 - MER58A DNA MER1_type -4 220 1 297 333 34 8 chr20 61213025 61213142 -10940740 + L2 LINE L2 2951 3070 -243 462 219 273 11 chr20 61213456 61213660 -10940222 - MIR SINE MIR -27 235 1 731 313 52 4 chr20 61214343 61214576 -10939306 - MIR SINE MIR -8 254 11 236 356 27 0 chr20 61214587 61214660 -10939222 - MIR3 SINE MIR -45 163 89 903 201 17 0 chr20 61216362 61216536 -10937346 + MER20 DNA MER1_type 32 208 -11 226 295 0 0 chr20 61216577 61216638 -10937244 + (CTAA)n Simple_repeat Simple_repeat 4 64 0 380 278 86 43 chr20 61216858 61217067 -10936815 - MIR SINE MIR -30 232 15 27 49 0 0 chr20 61217134 61217175 -10936707 + AT_rich Low_complexity Low_complexity 1 41 0 25 0 0 0 chr20 61217891 61217916 -10935966 + AT_rich Low_complexity Low_complexity 1 25 0 1034 170 61 28 chr20 61218568 61218780 -10935102 + MER20 DNA MER1_type 1 219 0 3096 235 64 39 chr20 61218812 61219226 -10934656 + MER69B DNA AcHobo 3 405 -2121 2055 104 18 4 chr20 61219226 61219535 -10934347 + AluSx SINE Alu 1 313 0 3096 235 64 39 chr20 61219535 61219649 -10934233 + MER69B DNA AcHobo 405 515 -2011 1432 130 23 0 chr20 61219649 61219864 -10934018 + L1PA13 LINE L1 5942 6161 -2 3096 235 64 39 chr20 61219864 61220412 -10933470 + MER69B DNA AcHobo 515 1200 -26 309 250 38 83 chr20 61220434 61220566 -10933316 + L2 LINE L2 2226 2351 -963 684 235 59 83 chr20 61220601 61220681 -10933201 + MLT1A2 LTR MaLR 90 170 -204 2301 37 4 8 chr20 61220681 61220949 -10932933 + AluY SINE Alu 1 267 -44 684 235 59 83 chr20 61220949 61221157 -10932725 + MLT1A2 LTR MaLR 170 371 -3 815 216 59 10 chr20 61221165 61221337 -10932545 + MLT1D LTR MaLR 24 209 -296 333 0 0 0 chr20 61221337 61221374 -10932508 + (CA)n Simple_repeat Simple_repeat 1 37 0 815 216 59 10 chr20 61221374 61221405 -10932477 + MLT1D LTR MaLR 209 237 -268 480 270 18 18 chr20 61221438 61221601 -10932281 + MLT1D LTR MaLR 305 467 0 476 348 67 0 chr20 61221987 61222151 -10931731 - L2 LINE L2 -275 3038 2864 413 88 0 0 chr20 61222710 61222767 -10931115 - Alu SINE Alu -11 300 244 375 188 0 0 chr20 61222992 61223056 -10930826 - tRNA-Ile-ATT tRNA tRNA -5 72 9 514 330 84 4 chr20 61223653 61223880 -10930002 + MIR SINE MIR 8 252 -10 504 45 0 0 chr20 61223954 61224021 -10929861 + (TC)n Simple_repeat Simple_repeat 2 68 0 441 0 0 0 chr20 61224020 61224069 -10929813 + (TG)n Simple_repeat Simple_repeat 2 50 0 * 795 182 167 26 chr20 61224763 61224955 -10928927 + MER20 DNA MER1_type 1 219 0 807 301 9 0 chr20 61225040 61225259 -10928623 - MIR SINE MIR 0 262 42 305 309 51 38 chr20 61226074 61226280 -10927602 - L1M4 LINE L1 -1890 4256 4045 2011 181 16 19 chr20 61226280 61226435 -10927447 + MLT1A1 LTR MaLR 1 155 -210 1786 166 3 17 chr20 61226435 61226736 -10927146 + AluSx SINE Alu 1 297 -15 2011 181 16 19 chr20 61226736 61226944 -10926938 + MLT1A1 LTR MaLR 155 363 -2 305 309 51 38 chr20 61226944 61226973 -10926909 - L1M4 LINE L1 -2101 4045 4018 24 32 0 0 chr20 61227031 61227062 -10926820 + AT_rich Low_complexity Low_complexity 1 31 0 5153 180 52 24 chr20 61227590 61227919 -10925963 + Tigger6a DNA MER2_type 24 343 -1254 2265 81 3 20 chr20 61227919 61228253 -10925629 + AluSc SINE Alu 1 309 0 5153 180 52 24 chr20 61228253 61228949 -10924933 + Tigger6a DNA MER2_type 343 1077 -6 2225 162 15 22 chr20 61229140 61229541 -10924341 - L1MC1 LINE L1 0 6333 5936 416 296 58 39 chr20 61229769 61229975 -10923907 + Charlie8 DNA MER1_type 33 242 -2175 330 323 0 11 chr20 61231434 61231527 -10922355 - MLT1J LTR MaLR -193 318 227 1044 83 10 36 chr20 61231927 61232180 -10921702 + (TTCC)n Simple_repeat Simple_repeat 1 427 0 1044 70 5 38 chr20 61232180 61232366 -10921516 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 184 119 24 24 chr20 61232464 61232506 -10921376 + CT-rich Low_complexity Low_complexity 4 45 0 1670 182 0 13 chr20 61232532 61232839 -10921043 - AluJb SINE Alu -5 307 5 1926 244 72 55 chr20 61233539 61233647 -10920235 + MLT1E LTR MaLR 2 107 -486 2258 129 51 28 chr20 61233647 61234003 -10919879 + THE1B LTR MaLR 1 364 0 1926 244 72 55 chr20 61234003 61234476 -10919406 + MLT1E LTR MaLR 107 593 0 198 0 0 0 chr20 61234618 61234640 -10919242 + (GA)n Simple_repeat Simple_repeat 1 22 0 623 251 128 16 chr20 61234679 61234866 -10919016 + MLT1K LTR MaLR 334 541 -47 663 103 0 0 chr20 61235706 61235803 -10918079 + (TCCCC)n Simple_repeat Simple_repeat 5 101 0 180 0 0 0 chr20 61235998 61236018 -10917864 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 459 230 48 8 chr20 61236061 61236187 -10917695 + MLT1H LTR MaLR 375 505 -44 250 200 18 18 chr20 61236281 61236336 -10917546 + LTR33A LTR ERVL 469 523 0 425 339 102 0 chr20 61236340 61236526 -10917356 - MIR SINE MIR -56 206 2 2441 70 0 3 chr20 61238556 61238855 -10915027 + AluY SINE Alu 1 298 -13 493 316 129 28 chr20 61240956 61241226 -10912656 + L2 LINE L2 2630 2871 -442 1663 223 116 12 chr20 61241226 61241647 -10912235 - MLT1C LTR MaLR 0 467 3 493 316 129 28 chr20 61241647 61241979 -10911903 + L2 LINE L2 2871 3305 -8 275 228 127 25 chr20 61242082 61242161 -10911721 - L2 LINE L2 -13 3300 3214 273 283 201 25 chr20 61242193 61242352 -10911530 - MIR SINE MIR -12 250 64 274 294 77 47 chr20 61242426 61242596 -10911286 - MIR SINE MIR -76 186 12 294 306 52 45 chr20 61242924 61243058 -10910824 + MLT1K LTR MaLR 14 148 -440 503 332 77 17 chr20 61243079 61243377 -10910505 + MLT1K LTR MaLR 273 588 0 27 0 0 0 chr20 61243968 61243995 -10909887 + AT_rich Low_complexity Low_complexity 1 27 0 228 204 0 0 chr20 61244079 61244128 -10909754 - L1ME4a LINE L1 -112 6009 5961 246 182 55 0 chr20 61244147 61244202 -10909680 - L1MCa LINE L1 -4363 2063 2006 * 377 293 53 25 chr20 61244200 61244364 -10909518 - L1ME4a LINE L1 -448 5673 5527 313 256 0 0 chr20 61244664 61244746 -10909136 - MIR SINE MIR -71 191 110 1368 181 32 16 chr20 61244760 61244872 -10909010 + AluJb SINE Alu 6 115 -197 363 44 0 0 chr20 61244872 61244917 -10908965 + (TAA)n Simple_repeat Simple_repeat 1 45 0 1368 181 32 16 chr20 61244917 61245053 -10908829 + AluJb SINE Alu 115 258 -54 479 229 28 21 chr20 61245322 61245466 -10908416 - Charlie7 DNA MER1_type -18 2594 2450 749 267 11 11 chr20 61245470 61245657 -10908225 - MLT1A2 LTR MaLR -8 366 180 341 216 80 11 chr20 61245652 61245740 -10908142 + MLT1A1 LTR MaLR 79 172 -193 * 2354 102 0 0 chr20 61245765 61246060 -10907822 - AluSq SINE Alu -18 295 1 383 177 0 0 chr20 61246088 61246147 -10907735 - MLT1A2 LTR MaLR -239 126 68 275 50 25 0 chr20 61246147 61246187 -10907695 - MADE1 DNA Mariner 0 80 40 415 40 0 0 chr20 61246247 61246297 -10907585 - MADE1 DNA Mariner -29 51 2 321 242 0 0 chr20 61246297 61246361 -10907521 - MLT1A2 LTR MaLR -306 68 5 241 254 0 28 chr20 61246474 61246545 -10907337 - Charlie7 DNA MER1_type -1882 730 662 2109 115 3 3 chr20 61246546 61246841 -10907041 + AluSx SINE Alu 1 295 -17 2138 101 7 0 chr20 61246844 61247163 -10906719 + AluSc SINE Alu 1 321 0 1022 259 98 73 chr20 61247201 61247677 -10906205 - MLT1G1 LTR MaLR 0 595 101 2392 90 0 0 chr20 61247677 61247976 -10905906 - AluSc SINE Alu -10 299 1 1022 259 98 73 chr20 61247976 61248071 -10905811 - MLT1G1 LTR MaLR -494 101 10 400 248 99 8 chr20 61248092 61248213 -10905669 - L2 LINE L2 -2 3311 3180 1092 254 46 36 chr20 61248227 61248620 -10905262 - Charlie7 DNA MER1_type -1989 623 227 2442 95 21 0 chr20 61248621 61248957 -10904925 - L1P LINE L1 -1967 4179 3837 4036 51 8 8 chr20 61248957 61249443 -10904439 + L1PA7 LINE L1 5666 6154 0 534 239 108 11 chr20 61249467 61249643 -10904239 - Charlie7 DNA MER1_type -2353 259 67 319 249 153 62 chr20 61250311 61250520 -10903362 - MIR SINE MIR -2 260 33 218 108 62 0 chr20 61250556 61250621 -10903261 + (TA)n Simple_repeat Simple_repeat 1 69 0 228 135 52 10 chr20 61250686 61250694 -10903188 + (TA)n Simple_repeat Simple_repeat 1 7 -93 2744 105 8 3 chr20 61250694 61251056 -10902826 + THE1B LTR MaLR 1 364 0 228 135 52 10 chr20 61251056 61251143 -10902739 + (TA)n Simple_repeat Simple_repeat 7 100 0 23 92 0 0 chr20 61251159 61251224 -10902658 + AT_rich Low_complexity Low_complexity 1 65 0 2403 210 52 36 chr20 61251300 61251925 -10901957 + MLT1E3 LTR MaLR 3 624 0 1058 99 12 0 chr20 61251986 61252147 -10901735 + (TTTC)n Simple_repeat Simple_repeat 4 166 0 865 193 146 14 chr20 61252202 61252431 -10901451 + MIR SINE MIR 3 262 0 794 305 178 7 chr20 61252892 61253325 -10900557 + LTR33 LTR ERVL 15 521 0 227 304 0 0 chr20 61254495 61254551 -10899331 - L2 LINE L2 -8 3264 3209 514 279 132 75 chr20 61254738 61255154 -10898728 + MLT1K LTR MaLR 119 558 -30 1712 186 114 52 chr20 61255198 61255567 -10898315 + MLT1C LTR MaLR 1 403 -64 2390 89 0 0 chr20 61255567 61255859 -10898023 - AluSq SINE Alu -17 296 5 1712 186 114 52 chr20 61255859 61255929 -10897953 + MLT1C LTR MaLR 403 467 0 1273 186 14 0 chr20 61256416 61256626 -10897256 - MER20 DNA MER1_type -2 217 5 370 270 16 40 chr20 61256652 61256778 -10897104 - L2 LINE L2 -4 3268 3146 787 272 30 43 chr20 61256916 61257221 -10896661 + MLT1J LTR MaLR 1 301 -210 2278 200 84 2 chr20 61257233 61257698 -10896184 + MLT1D LTR MaLR 3 505 0 381 323 0 23 chr20 61257760 61257893 -10895989 + MLT1J LTR MaLR 361 490 -21 251 231 9 93 chr20 61257898 61258006 -10895876 + MER74B LTR ERVL 1 99 -523 * 862 263 14 0 chr20 61257986 61258199 -10895683 + MER74B LTR ERVL 211 426 -196 503 267 174 40 chr20 61258212 61258566 -10895316 - L2 LINE L2 -246 3067 2668 457 269 68 74 chr20 61258957 61259114 -10894768 + MER46C DNA MER2_type 2 158 -180 276 30 0 0 chr20 61259114 61259147 -10894735 + (TG)n Simple_repeat Simple_repeat 2 34 0 457 269 68 74 chr20 61259147 61259327 -10894555 + MER46C DNA MER2_type 158 337 -1 283 272 97 19 chr20 61259513 61259616 -10894266 + L2 LINE L2 3155 3265 -7 246 330 9 27 chr20 61260163 61260275 -10893607 + L2 LINE L2 2449 2558 -756 409 88 0 73 chr20 61260336 61260404 -10893478 - L1PA16 LINE L1 -10 6156 6094 394 261 33 0 chr20 61260409 61260501 -10893381 - L1ME LINE L1 -554 5616 5522 1624 76 0 0 chr20 61260578 61260775 -10893107 + AluY SINE Alu 1 197 -114 632 178 0 0 chr20 61261459 61261566 -10892316 + L1MB8 LINE L1 5821 5927 -251 4152 79 15 6 chr20 61261573 61262115 -10891767 - L1PB1 LINE L1 0 6151 5605 1886 49 5 0 chr20 61262115 61262327 -10891555 + L1PA4 LINE L1 5928 6152 -3 293 26 26 0 chr20 61262327 61262366 -10891516 - L1PB1 LINE L1 -535 5616 5577 825 320 148 25 chr20 61262511 61263095 -10890787 - L2 LINE L2 -291 3022 2369 199 341 35 0 chr20 61264877 61264962 -10888920 - MIR SINE MIR -85 123 36 818 260 104 43 chr20 61265107 61265522 -10888360 - LTR16A LTR ERVL -3 447 8 234 365 77 6 chr20 61265598 61265754 -10888128 + MIR SINE MIR 20 186 -76 546 325 34 5 chr20 61266234 61266443 -10887439 - MIR SINE MIR -10 252 38 351 266 130 58 chr20 61266938 61267123 -10886759 + MIR SINE MIR 28 231 -31 2641 154 47 0 chr20 61267123 61267532 -10886350 + MSTC LTR MaLR 1 428 0 351 266 130 58 chr20 61267532 61267553 -10886329 + MIR SINE MIR 231 249 -13 1285 273 15 0 chr20 61268339 61268672 -10885210 - LTR16C LTR ERVL 0 491 154 222 299 65 0 chr20 61268818 61268895 -10884987 - L2 LINE L2 -49 3223 3142 697 288 84 0 chr20 61268986 61269201 -10884681 - MIR SINE MIR -24 238 6 1172 152 37 28 chr20 61269205 61269422 -10884460 - MER20 DNA MER1_type 0 219 1 252 0 0 0 chr20 61269634 61269662 -10884220 + (TG)n Simple_repeat Simple_repeat 1 28 0 473 346 56 34 chr20 61270450 61270535 -10883347 + MIR SINE MIR 15 97 -165 2375 188 96 17 chr20 61270535 61271003 -10882879 + MLT1D LTR MaLR 1 505 0 473 346 56 34 chr20 61271003 61271151 -10882731 + MIR SINE MIR 97 253 -9 2614 175 8 19 chr20 61271232 61271701 -10882181 + MLT2C2 LTR ERVL 1 464 0 185 0 40 0 chr20 61271933 61271958 -10881924 + (CAA)n Simple_repeat Simple_repeat 2 27 0 21 0 0 0 chr20 61273518 61273539 -10880343 + AT_rich Low_complexity Low_complexity 1 21 0 2794 230 83 38 chr20 61273698 61274461 -10879421 - MER21B LTR ERV1 -57 806 23 244 294 98 49 chr20 61275459 61275663 -10878219 + L1ME LINE L1 5301 5514 -607 396 232 158 0 chr20 61275976 61276071 -10877811 - MER81 DNA DNA -3 111 2 1890 195 30 68 chr20 61276117 61276588 -10877294 - MLT1C LTR MaLR 0 467 15 193 229 0 0 chr20 61276700 61276735 -10877147 - L2 LINE L2 -562 2752 2718 1949 208 5 26 chr20 61277082 61277472 -10876410 - MSTD LTR MaLR 0 396 15 2115 123 3 7 chr20 61277472 61277773 -10876109 - AluSx SINE Alu -10 302 3 804 320 104 21 chr20 61278585 61279146 -10874736 - L2 LINE L2 0 3313 2705 1885 122 3 67 chr20 61279146 61279475 -10874407 - AluSx SINE Alu -4 308 1 804 320 104 21 chr20 61279475 61279551 -10874331 - L2 LINE L2 -608 2705 2637 1246 174 58 5 chr20 61279891 61280098 -10873784 + MER20 DNA MER1_type 1 218 -1 2160 119 0 0 chr20 61280234 61280519 -10873363 + AluSx SINE Alu 1 285 -27 763 315 82 45 chr20 61281277 61281987 -10871895 - L2 LINE L2 -2 3311 2567 349 296 74 43 chr20 61282662 61282892 -10870990 - MER102b DNA MER1_type -1 340 104 1904 149 61 6 chr20 61283122 61283451 -10870431 - MLT1A1 LTR MaLR -18 347 1 381 242 42 0 chr20 61284153 61284248 -10869634 - MER5A DNA MER1_type -77 112 14 21 0 0 0 chr20 61284525 61284546 -10869336 + AT_rich Low_complexity Low_complexity 1 21 0 411 291 36 64 chr20 61284563 61284783 -10869099 - MIR SINE MIR -10 252 39 370 212 329 14 chr20 61285383 61285529 -10868353 + MIR SINE MIR 1 192 -70 761 297 0 50 chr20 61285822 61286081 -10867801 - MIR SINE MIR -6 256 11 22 35 0 0 chr20 61286297 61286326 -10867556 + AT_rich Low_complexity Low_complexity 1 29 0 209 313 144 10 chr20 61286714 61286915 -10866967 + L2 LINE L2 1533 1760 -1554 1391 199 41 23 chr20 61287499 61287841 -10866041 - L1MA9 LINE L1 -39 6273 5926 257 279 60 74 chr20 61288113 61288328 -10865554 - HAL1 LINE L1 -1060 1447 1236 525 189 98 8 chr20 61288401 61288523 -10865359 - MLT1D LTR MaLR -366 139 7 1306 261 14 24 chr20 61288676 61288715 -10865167 - MLT2B3 LTR ERVL 0 554 516 522 0 0 0 chr20 61288715 61288773 -10865109 + (TA)n Simple_repeat Simple_repeat 2 59 0 1306 261 14 24 chr20 61288773 61289104 -10864778 - MLT2B3 LTR ERVL -38 516 188 442 285 0 8 chr20 61289104 61289227 -10864655 + L2 LINE L2 3188 3309 -4 721 250 36 52 chr20 61289394 61289642 -10864240 - MIR SINE MIR -2 260 17 225 0 0 0 chr20 61290027 61290052 -10863830 + (T)n Simple_repeat Simple_repeat 1 25 0 2737 105 8 3 chr20 61290088 61290450 -10863432 + THE1B LTR MaLR 1 364 0 2125 102 3 0 chr20 61291403 61291687 -10862195 + L1PA16 LINE L1 5608 5892 -274 246 335 34 80 chr20 61291704 61291807 -10862075 + L2 LINE L2 476 582 -2732 865 232 119 0 chr20 61291807 61291992 -10861890 - MER63A DNA MER1_type -2 208 2 246 335 34 80 chr20 61291992 61292127 -10861755 + L2 LINE L2 582 703 -2611 1442 275 77 17 chr20 61292128 61292659 -10861223 + MER20B DNA MER1_type 104 666 -117 193 343 116 32 chr20 61292810 61293061 -10860821 + L2 LINE L2 724 995 -2319 325 255 211 6 chr20 61293085 61293246 -10860636 - L1MC/D LINE L1 -2048 5760 5567 359 281 287 12 chr20 61293389 61293950 -10859932 + L2 LINE L2 2548 3281 -32 1342 196 70 11 chr20 61293953 61294239 -10859643 - MER58B DNA MER1_type -26 315 13 505 317 9 45 chr20 61295563 61295784 -10858098 + MIR SINE MIR 34 246 -16 382 282 53 8 chr20 61295974 61296105 -10857777 + L2 LINE L2 3173 3309 -4 378 268 84 22 chr20 61296205 61296384 -10857498 - LTR33 LTR ERVL -8 513 324 1186 240 173 44 chr20 61296492 61297066 -10856816 + MLT2F LTR ERVL 2 649 -14 1372 177 99 19 chr20 61297073 61297395 -10856487 - MLT1A1 LTR MaLR -13 352 5 249 212 30 15 chr20 61297549 61297615 -10856267 - LTR33 LTR ERVL -437 84 18 510 176 40 96 chr20 61298647 61298772 -10855110 - L2 LINE L2 -8 3305 3188 4160 175 60 36 chr20 61298787 61299317 -10854565 - MER21B LTR ERV1 0 863 304 3728 70 29 2 chr20 61299317 61299799 -10854083 - L1PA8 LINE L1 0 6172 5678 4160 175 60 36 chr20 61299799 61300097 -10853785 - MER21B LTR ERV1 -559 304 15 211 302 35 41 chr20 61300153 61300322 -10853560 - L2 LINE L2 -292 3021 2854 2198 103 7 3 chr20 61300392 61300684 -10853198 - AluSx SINE Alu -19 293 1 1583 213 58 73 chr20 61300831 61301295 -10852587 - LTR40a LTR ERVL 0 519 6 216 250 19 0 chr20 61301520 61301572 -10852310 - L2 LINE L2 -9 3304 3252 491 275 42 24 chr20 61301650 61301817 -10852065 + MER5B DNA MER1_type 4 173 -5 223 295 105 0 chr20 61302185 61302280 -10851602 + MIR SINE MIR 11 115 -147 1195 171 18 31 chr20 61302283 61302505 -10851377 + AluJo SINE Alu 1 219 -93 277 313 52 15 chr20 61302509 61302643 -10851239 + MIR SINE MIR 120 258 -4 * 279 274 32 0 chr20 61302638 61302733 -10851149 - MIR SINE MIR -65 197 100 2029 112 31 3 chr20 61303663 61303950 -10849932 - AluSg SINE Alu -15 295 1 458 272 232 34 chr20 61304080 61304459 -10849423 - MLT1L LTR MaLR -8 607 154 305 293 16 32 chr20 61304578 61304701 -10849181 + Charlie8 DNA MER1_type 158 278 -2139 440 273 86 88 chr20 61305584 61305776 -10848106 - L2 LINE L2 -52 3261 3070 980 135 180 11 chr20 61305776 61305954 -10847928 + MER63A DNA MER1_type 3 210 0 440 273 86 88 chr20 61305954 61306052 -10847830 - L2 LINE L2 -243 3070 2973 2413 77 0 7 chr20 61306052 61306349 -10847533 + AluY SINE Alu 1 295 -16 440 273 86 88 chr20 61306349 61306612 -10847270 - L2 LINE L2 -340 2973 2695 336 309 99 43 chr20 61307333 61307566 -10846316 - MIR SINE MIR -10 252 7 549 329 54 14 chr20 61308435 61308657 -10845225 + MIR SINE MIR 21 251 -11 205 214 122 30 chr20 61308811 61308878 -10845004 + MIR SINE MIR 77 150 -58 182 310 0 0 chr20 61308966 61309024 -10844858 + MIR SINE MIR 200 257 -5 24 0 0 0 chr20 61309637 61309661 -10844221 + AT_rich Low_complexity Low_complexity 1 24 0 2279 88 10 3 chr20 61310366 61310663 -10843219 + AluSc SINE Alu 1 299 -10 1537 176 23 98 chr20 61310697 61311084 -10842798 + MLT1A1 LTR MaLR 1 358 -7 500 302 34 67 chr20 61311139 61311587 -10842295 + L2 LINE L2 2754 3265 -48 21 36 0 0 chr20 61311993 61312021 -10841861 + AT_rich Low_complexity Low_complexity 1 28 0 532 278 40 7 chr20 61312177 61312328 -10841554 + MIR SINE MIR 34 189 -73 22 35 0 0 chr20 61312560 61312589 -10841293 + AT_rich Low_complexity Low_complexity 1 29 0 622 158 0 0 chr20 61312637 61312738 -10841144 - AluSx SINE Alu -3 307 207 1147 98 0 0 chr20 61312739 61312882 -10841000 - AluSx SINE Alu -170 143 1 988 120 55 38 chr20 61313666 61313849 -10840033 + MER20 DNA MER1_type 10 195 -24 2188 137 76 15 chr20 61314097 61314440 -10839442 - THE1B LTR MaLR 0 364 1 234 0 0 0 chr20 61315736 61315762 -10838120 + (A)n Simple_repeat Simple_repeat 1 26 0 2076 121 10 7 chr20 61315769 61316067 -10837815 + AluSx SINE Alu 1 299 -13 29 0 0 0 chr20 61316840 61316869 -10837013 + AT_rich Low_complexity Low_complexity 1 29 0 993 190 43 88 chr20 61316869 61317221 -10836661 + L1MA9 LINE L1 5939 6274 -38 404 104 15 30 chr20 61317270 61317337 -10836545 + MLT1D LTR MaLR 5 70 -435 310 395 27 0 chr20 61317348 61317495 -10836387 + L2 LINE L2 2892 3042 -271 385 161 11 11 chr20 61318027 61318120 -10835762 + GA-rich Low_complexity Low_complexity 2 94 0 1662 139 28 82 chr20 61318253 61318570 -10835312 - AluSx SINE Alu -10 302 3 1752 189 45 3 chr20 61318776 61319109 -10834773 + MER7A DNA MER2_type 2 346 0 323 221 0 9 chr20 61319321 61319434 -10834448 + (ATG)n Simple_repeat Simple_repeat 2 113 0 31 26 0 0 chr20 61319553 61319591 -10834291 + AT_rich Low_complexity Low_complexity 1 38 0 318 230 48 122 chr20 61320129 61320300 -10833582 - L1MC5 LINE L1 -44 7917 7766 2243 85 3 14 chr20 61320300 61320595 -10833287 + AluSq SINE Alu 1 292 -21 318 230 48 122 chr20 61320595 61320653 -10833229 - L1MC5 LINE L1 -195 7766 7705 21 71 0 0 chr20 61320728 61320770 -10833112 + AT_rich Low_complexity Low_complexity 1 42 0 1113 201 19 0 chr20 61320918 61321132 -10832750 - MER58A DNA MER1_type -3 221 4 261 291 44 89 chr20 61321625 61321709 -10832173 - MIR SINE MIR -87 175 100 2169 93 0 42 chr20 61321709 61322020 -10831862 - AluSx SINE Alu -14 298 1 261 291 44 89 chr20 61322020 61322093 -10831789 - MIR SINE MIR -162 100 25 291 336 184 43 chr20 61322250 61322506 -10831376 + L2 LINE L2 2981 3272 0 5690 50 3 26 chr20 61323009 61323785 -10830097 + L1PA7 LINE L1 5429 6154 0 23 0 0 0 chr20 61325904 61325927 -10827955 + AT_rich Low_complexity Low_complexity 1 23 0 805 257 58 25 chr20 61326688 61326929 -10826953 + MIR SINE MIR 13 261 -1 512 211 22 83 chr20 61327371 61327551 -10826331 + MER112 DNA MER1_type 19 187 -73 1243 134 45 5 chr20 61327556 61327758 -10826124 + AluJo SINE Alu 1 210 -102 1413 227 50 0 chr20 61327811 61328133 -10825749 - MER58B DNA MER1_type -3 338 1 2243 84 11 0 chr20 61328360 61328644 -10825238 - AluY SINE Alu -4 307 21 288 0 0 0 chr20 61329408 61329440 -10824442 + (TG)n Simple_repeat Simple_repeat 2 33 0 1938 138 0 7 chr20 61329805 61330087 -10823795 + AluJb SINE Alu 1 280 -32 294 29 0 0 chr20 61330087 61330122 -10823760 + (TAAAA)n Simple_repeat Simple_repeat 1 35 0 191 317 146 32 chr20 61330798 61330855 -10823027 + L2 LINE L2 3136 3185 -87 905 191 155 49 chr20 61330855 61330917 -10822965 + MER58B DNA MER1_type 4 58 -2362 1755 195 0 19 chr20 61330917 61331235 -10822647 - AluJb SINE Alu 0 312 1 905 191 155 49 chr20 61331235 61331476 -10822406 + MER58B DNA MER1_type 58 339 -2 191 317 146 32 chr20 61331476 61331541 -10822341 + L2 LINE L2 3185 3272 0 216 203 102 17 chr20 61333132 61333191 -10820691 - L2 LINE L2 -520 2794 2731 383 315 0 23 chr20 61334111 61334241 -10819641 + MIR SINE MIR 95 221 -41 22 0 0 0 chr20 61334451 61334473 -10819409 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr20 61334699 61334723 -10819159 + AT_rich Low_complexity Low_complexity 1 24 0 278 293 41 8 chr20 61334729 61334852 -10819030 - LTR16C LTR ERVL -8 483 357 625 262 90 41 chr20 61334996 61335240 -10818642 - MIR SINE MIR 0 262 7 4256 180 25 1 chr20 61335324 61336098 -10817784 + L1MA3 LINE L1 17 808 -6757 * 14613 147 26 6 chr20 61336093 61341619 -10812263 + L1MA3 LINE L1 2080 7724 0 403 338 8 15 chr20 61341630 61341763 -10812119 + MIR SINE MIR 20 151 -111 886 277 64 32 chr20 61341865 61342269 -10811613 + LTR16C LTR ERVL 73 489 -2 211 364 20 10 chr20 61342271 61342370 -10811512 + MIR SINE MIR 163 262 0 2759 103 0 21 chr20 61342569 61342996 -10810886 + L1PB1 LINE L1 5731 6148 -3 257 128 0 0 chr20 61343331 61343378 -10810504 + L1M LINE L1 5328 5374 -931 1684 166 17 17 chr20 61343504 61343805 -10810077 + AluJo SINE Alu 12 312 0 1601 219 53 8 chr20 61344043 61344441 -10809441 + LTR52 LTR ERVL 3 418 -3 585 266 82 38 chr20 61345714 61345981 -10807901 + LTR16C LTR ERVL 213 491 0 250 261 0 22 chr20 61346072 61346164 -10807718 + L1MC4 LINE L1 6614 6703 -1339 2144 130 3 0 chr20 61346167 61346467 -10807415 - AluSx SINE Alu -11 301 1 253 361 19 9 chr20 61347103 61347211 -10806671 - L2 LINE L2 -176 3096 2988 215 158 40 40 chr20 61347640 61347716 -10806166 + GA-rich Low_complexity Low_complexity 5 80 0 * 909 138 0 17 chr20 61347707 61347888 -10805994 + (GGGA)n Simple_repeat Simple_repeat 1 178 0 534 297 72 31 chr20 61347892 61348182 -10805700 - LTR16B LTR ERVL -152 312 11 685 244 143 30 chr20 61348201 61348661 -10805221 - MER113 DNA MER1_type? -3 518 7 853 333 23 20 chr20 61349178 61349575 -10804307 - MLT1I LTR MaLR 0 409 12 365 221 0 47 chr20 61349925 61350011 -10803871 + L2 LINE L2 3227 3308 -5 4572 125 29 12 chr20 61350044 61350842 -10803040 - L1PA16 LINE L1 -1 6165 5355 1002 247 68 51 chr20 61351326 61351753 -10802129 - L1MD1 LINE L1 -408 6114 5646 13258 129 75 11 chr20 61351753 61354021 -10799861 - Tigger1 DNA MER2_type 0 2418 4 1002 247 68 51 chr20 61354021 61354176 -10799706 - L1MD1 LINE L1 -876 5646 5495 576 228 38 7 chr20 61354170 61354439 -10799443 - L1MD1 LINE L1 -3004 3422 3025 * 2713 154 35 75 chr20 61354443 61354786 -10799096 - L1MC3 LINE L1 -6 7779 7475 2075 149 0 0 chr20 61354786 61355094 -10798788 - AluSx SINE Alu -4 308 1 2713 154 35 75 chr20 61355094 61355431 -10798451 - L1MC3 LINE L1 -310 7475 7126 310 232 50 51 chr20 61355430 61355611 -10798271 - L1MD1 LINE L1 -4749 1679 1477 * 259 306 153 0 chr20 61356302 61356413 -10797469 - MIR SINE MIR 0 262 135 536 268 22 6 chr20 61356718 61356897 -10796985 + MLT1K LTR MaLR 405 586 -2 469 298 144 14 chr20 61357195 61357410 -10796472 + MIR SINE MIR 19 261 -1 335 259 79 0 chr20 61357516 61357655 -10796227 - MER103 DNA DNA -9 157 8 361 226 151 0 chr20 61357866 61357959 -10795923 + MER58A DNA MER1_type 7 113 0 925 206 22 0 chr20 61357963 61358147 -10795735 + MER58A DNA MER1_type 37 224 0 419 295 146 67 chr20 61358916 61359272 -10794610 - L2 LINE L2 0 3313 2930 572 315 88 8 chr20 61360525 61360763 -10793119 + MIR SINE MIR 2 258 -4 434 238 54 75 chr20 61361050 61361197 -10792685 + MIR3 SINE MIR 2 145 -63 399 289 60 20 chr20 61361233 61361382 -10792500 - Charlie8 DNA MER1_type -2135 282 128 623 278 31 26 chr20 61362844 61363035 -10790847 + L2 LINE L2 3119 3310 -3 1041 292 89 29 chr20 61363146 61363605 -10790277 - L2 LINE L2 0 3313 2816 4117 48 21 0 chr20 61363605 61364120 -10789762 + L1PA6 LINE L1 5629 6154 0 1041 292 89 29 chr20 61364120 61364247 -10789635 - L2 LINE L2 -497 2816 2698 670 284 30 45 chr20 61365183 61365447 -10788435 + MLT1L LTR MaLR 19 278 -337 368 315 22 28 chr20 61365480 61365661 -10788221 + MLT1L LTR MaLR 359 538 -77 839 156 81 0 chr20 61365662 61365848 -10788034 - MER58 DNA MER1_type -22 2398 2198 357 310 0 0 chr20 61365887 61365974 -10787908 - MER58 DNA MER1_type -2333 87 1 407 264 69 14 chr20 61366152 61366296 -10787586 - MIR SINE MIR 0 262 111 384 281 88 0 chr20 61368243 61368357 -10785525 - L2 LINE L2 -5 3267 3144 341 267 50 0 chr20 61369128 61369248 -10784634 - L1ME4a LINE L1 -3 6118 5993 1969 136 0 36 chr20 61369257 61369559 -10784323 + AluSg SINE Alu 1 291 -19 284 240 16 66 chr20 61369837 61369958 -10783924 - L1ME4a LINE L1 -1993 5815 5701 1622 170 13 43 chr20 61370148 61370448 -10783434 + AluJo SINE Alu 5 295 -17 200 273 0 0 chr20 61371348 61371403 -10782479 + A-rich Low_complexity Low_complexity 3 57 0 451 308 25 6 chr20 61372068 61372227 -10781655 - MIR SINE MIR 0 262 101 184 309 160 41 chr20 61372602 61372796 -10781086 + L2 LINE L2 2442 2658 -656 347 356 78 53 chr20 61372938 61373298 -10780584 + L2 LINE L2 2871 3239 -33 1176 110 0 0 chr20 61374545 61374700 -10779182 + AluSg/x SINE Alu 127 281 -31 39640 62 2 8 chr20 61374719 61376554 -10777328 + L1PA5 LINE L1 11 1856 -4298 2350 105 0 0 chr20 61376554 61376858 -10777024 - AluY SINE Alu -7 304 1 39640 62 2 8 chr20 61376858 61381207 -10772675 + L1PA5 LINE L1 1856 6154 0 3322 100 30 6 chr20 61381223 61381732 -10772150 + L1MA2 LINE L1 5784 6304 0 22 0 0 0 chr20 61381762 61381784 -10772098 + AT_rich Low_complexity Low_complexity 1 22 0 897 193 35 45 chr20 61382803 61382848 -10771034 - MER20 DNA MER1_type 0 219 175 2574 49 0 0 chr20 61382848 61383152 -10770730 - AluY SINE Alu -7 304 1 897 193 35 45 chr20 61383152 61383308 -10770574 - MER20 DNA MER1_type -44 175 20 2961 198 5 5 chr20 61383308 61383883 -10769999 - L1M1 LINE L1 -6969 596 22 439 265 56 139 chr20 61384575 61384862 -10769020 + L2 LINE L2 3010 3272 0 305 278 67 56 chr20 61385524 61385704 -10768178 - L1ME4a LINE L1 -43 6078 5897 430 55 98 30 chr20 61385731 61385895 -10767987 + (TATAA)n Simple_repeat Simple_repeat 5 179 0 * 585 31 111 0 chr20 61385891 61386053 -10767829 + (TA)n Simple_repeat Simple_repeat 1 180 0 2246 101 3 0 chr20 61386053 61386339 -10767543 - AluSq SINE Alu -26 287 1 275 286 20 14 chr20 61386361 61386508 -10767374 - L1ME4a LINE L1 -159 5962 5815 25 0 0 0 chr20 61386538 61386563 -10767319 + AT_rich Low_complexity Low_complexity 1 25 0 11417 191 66 34 chr20 61386591 61393223 -10760659 - L1MA5A LINE L1 -14 6925 3 290 329 0 43 chr20 61393717 61393857 -10760025 + MIR SINE MIR 57 190 -72 2448 222 14 2 chr20 61394089 61394661 -10759221 - L1MB7 LINE L1 -11 6173 5595 40 37 0 0 chr20 61394661 61394715 -10759167 + AT_rich Low_complexity Low_complexity 1 54 0 5260 114 51 1 chr20 61394724 61395589 -10758293 - L1MA5A LINE L1 -24 6273 5366 327 102 0 0 chr20 61395626 61395675 -10758207 - L1MB7 LINE L1 -587 5579 5531 2145 107 0 3 chr20 61395773 61396062 -10757820 + AluSx SINE Alu 14 301 -11 403 319 84 26 chr20 61396156 61396382 -10757500 - MIR SINE MIR -1 261 23 347 241 128 15 chr20 61396656 61396789 -10757093 + MIR SINE MIR 38 185 -77 1674 170 38 12 chr20 61396866 61397208 -10756674 - MLT1A1 LTR MaLR 0 365 15 887 205 47 6 chr20 61397663 61397834 -10756048 - MER5B DNA MER1_type 0 178 1 3633 222 23 10 chr20 61397893 61398795 -10755087 - MER63C DNA MER1_type -14 916 3 388 200 136 0 chr20 61398878 61398988 -10754894 - LTR33 LTR ERVL -396 125 1 1522 261 156 11 chr20 61399271 61399791 -10754091 - MLT1G1 LTR MaLR 0 595 1 325 162 131 10 chr20 61400579 61400678 -10753204 - L1MC4 LINE L1 -4 8038 7928 500 45 15 0 chr20 61400683 61400750 -10753132 + (TTCC)n Simple_repeat Simple_repeat 3 70 0 2045 126 0 0 chr20 61400753 61401024 -10752858 - AluSx SINE Alu -2 310 40 219 190 51 13 chr20 61401031 61401103 -10752779 + CT-rich Low_complexity Low_complexity 2 79 -4 1736 181 17 0 chr20 61401103 61401396 -10752486 - AluJb SINE Alu -14 298 1 321 174 0 0 chr20 61401409 61401478 -10752404 + (TCTCTG)n Simple_repeat Simple_repeat 2 70 0 890 191 14 18 chr20 61401574 61401794 -10752088 - L1MC4 LINE L1 -144 7898 7680 273 94 31 31 chr20 61402134 61402198 -10751684 + (TAATG)n Simple_repeat Simple_repeat 2 65 0 1072 306 8 5 chr20 61402548 61402933 -10750949 - LTR16C LTR ERVL -32 459 74 2102 82 14 7 chr20 61403858 61404179 -10749703 - AluSx SINE Alu 0 323 1 1720 216 15 30 chr20 61404403 61404805 -10749077 + MSTD LTR MaLR 1 396 0 2299 119 0 0 chr20 61405054 61405364 -10748518 + AluSg SINE Alu 1 310 0 684 138 25 62 chr20 61405864 61405895 -10747987 - L1MA9 LINE L1 0 6312 6281 1882 139 46 46 chr20 61405895 61406268 -10747614 - THE1C LTR MaLR -2 373 1 684 138 25 62 chr20 61406268 61406396 -10747486 - L1MA9 LINE L1 -31 6281 6159 189 196 0 0 chr20 61406469 61406515 -10747367 + (CA)n Simple_repeat Simple_repeat 2 47 0 1939 127 7 3 chr20 61406568 61406873 -10747009 - AluSx SINE Alu 0 306 1 580 188 40 34 chr20 61406931 61407080 -10746802 + L1MC2 LINE L1 6187 6336 -8 1194 176 8 0 chr20 61407089 61407327 -10746555 + L1MB5 LINE L1 5547 5786 -388 307 219 14 0 chr20 61407327 61407399 -10746483 + L1MB5 LINE L1 6092 6165 -9 1574 188 37 8 chr20 61407406 61407783 -10746099 + L1MC3 LINE L1 7398 7785 0 1502 212 54 43 chr20 61408052 61408514 -10745368 - MLT1C LTR MaLR 0 467 1 192 254 63 16 chr20 61408518 61408581 -10745301 - MER5C DNA MER1_type -239 85 20 516 274 49 37 chr20 61408616 61408780 -10745102 - MIR SINE MIR -77 185 20 225 368 9 28 chr20 61409436 61409542 -10744340 - L2 LINE L2 -14 3299 3196 484 284 54 45 chr20 61410070 61410292 -10743590 - L2 LINE L2 -182 3090 2867 627 209 189 0 chr20 61410395 61410543 -10743339 + MER8 DNA MER2_type 64 239 0 580 276 58 12 chr20 61410958 61411230 -10742652 + LTR16A LTR ERVL 66 371 -79 932 213 0 0 chr20 61411234 61411416 -10742466 - MLT1B LTR MaLR -4 386 205 1913 182 51 28 chr20 61411416 61411946 -10741936 - MLT2A2 LTR ERVL 0 554 1 537 237 68 38 chr20 61411963 61412164 -10741718 - MLT1B LTR MaLR -180 194 2 2421 189 42 5 chr20 61412307 61412895 -10740987 - L1MD3 LINE L1 -5 7990 7381 193 289 141 39 chr20 61413049 61413177 -10740705 - MIR3 SINE MIR -49 159 19 402 281 58 12 chr20 61413301 61413472 -10740410 - MLT1K LTR MaLR -408 180 2 261 299 16 87 chr20 61413709 61413836 -10740046 - MIR SINE MIR -50 212 95 1132 223 57 36 chr20 61413939 61414275 -10739607 + LTR16C LTR ERVL 149 491 0 1156 273 95 32 chr20 61414309 61414814 -10739068 - MLT1K LTR MaLR -24 564 28 1921 142 0 14 chr20 61415033 61415348 -10738534 - AluJb SINE Alu 0 311 1 1620 180 39 70 chr20 61415670 61415888 -10737994 - MER58D DNA MER1_type -2044 376 174 1067 192 0 0 chr20 61415888 61416055 -10737827 + FAM SINE Alu 2 168 -7 1620 180 39 70 chr20 61416055 61416224 -10737658 - MER58D DNA MER1_type -2246 174 1 739 165 57 57 chr20 61417225 61417383 -10736499 + MER58A DNA MER1_type 1 158 0 384 309 32 111 chr20 61417390 61417759 -10736123 - MLT1J LTR MaLR -62 449 110 2014 162 0 0 chr20 61417811 61418119 -10735763 - AluJo SINE Alu -2 310 3 21 0 0 0 chr20 61418775 61418796 -10735086 + AT_rich Low_complexity Low_complexity 1 21 0 1067 298 68 66 chr20 61418916 61419023 -10734859 - MLT1K LTR MaLR 0 588 483 2104 121 3 3 chr20 61419023 61419313 -10734569 + AluSg SINE Alu 1 290 -20 1067 298 68 66 chr20 61419313 61419783 -10734099 - MLT1K LTR MaLR -105 483 10 574 278 63 43 chr20 61419960 61420215 -10733667 + MLT1L LTR MaLR 38 297 -318 2252 158 40 32 chr20 61421626 61422175 -10731707 + MLT2A2 LTR ERVL 1 554 0 217 227 0 0 chr20 61422226 61422270 -10731612 + MIR SINE MIR 105 148 -114 279 311 32 49 chr20 61422270 61422551 -10731331 + L2 LINE L2 2761 3038 -275 867 280 88 23 chr20 61422575 61422918 -10730964 - LTR16C LTR ERVL -54 437 73 1941 154 0 3 chr20 61423129 61423421 -10730461 - AluJo SINE Alu -10 302 12 367 356 111 9 chr20 61424830 61425055 -10728827 - MIR SINE MIR 0 262 15 296 308 104 11 chr20 61425120 61425302 -10728580 + MIR SINE MIR 61 259 -3 323 279 12 0 chr20 61425835 61425921 -10727961 - L2 LINE L2 -3 3269 3183 701 247 30 0 chr20 61425933 61426099 -10727783 - MER69A DNA AcHobo -1 176 6 239 111 0 89 chr20 61426236 61426281 -10727601 - L1P5 LINE L1 -374 5777 5737 185 282 69 74 chr20 61426531 61426733 -10727149 + L2 LINE L2 3113 3313 0 330 142 20 147 chr20 61426768 61426965 -10726917 + (CCCA)n Simple_repeat Simple_repeat 3 174 0 204 132 13 176 chr20 61426977 61427136 -10726746 + (CCCA)n Simple_repeat Simple_repeat 3 135 0 306 121 40 147 chr20 61427177 61427375 -10726507 + (CCTA)n Simple_repeat Simple_repeat 2 178 0 253 115 0 193 chr20 61427717 61427935 -10725947 + (CCTA)n Simple_repeat Simple_repeat 2 177 0 207 0 0 0 chr20 61429172 61429195 -10724687 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 549 186 22 208 chr20 61430830 61431061 -10722821 + MER5A DNA MER1_type 2 189 0 1160 211 96 153 chr20 61431090 61431672 -10722210 + MLT1H LTR MaLR 1 549 0 1818 171 7 3 chr20 61431826 61432124 -10721758 - AluJb SINE Alu -13 299 1 854 246 61 74 chr20 61432193 61432596 -10721286 + MLT1I LTR MaLR 17 409 0 1270 158 10 0 chr20 61432654 61432856 -10721026 - MLT1B LTR MaLR 0 390 187 4671 120 36 65 chr20 61432900 61433700 -10720182 + L1PA15 LINE L1 5389 6165 0 1012 192 6 0 chr20 61433726 61433903 -10719979 - MLT1B LTR MaLR -212 178 1 405 0 0 0 chr20 61434537 61434582 -10719300 + (TA)n Simple_repeat Simple_repeat 1 45 0 1296 164 4 48 chr20 61434583 61434676 -10719206 - AluJo SINE Alu -91 221 126 2636 78 59 11 chr20 61434676 61435034 -10718848 - THE1C LTR MaLR 0 375 1 1296 164 4 48 chr20 61435034 61435171 -10718711 - AluJo SINE Alu -186 126 1 328 189 0 0 chr20 61436231 61436284 -10717598 + MER20 DNA MER1_type 3 55 -164 332 183 0 0 chr20 61436315 61436375 -10717507 + MER20 DNA MER1_type 160 219 0 253 241 17 0 chr20 61436698 61436756 -10717126 + Charlie8 DNA MER1_type 1367 1425 -992 992 210 88 10 chr20 61436767 61436972 -10716910 + MER58A DNA MER1_type 4 224 0 1099 226 9 5 chr20 61437460 61437681 -10716201 - MER58A DNA MER1_type 0 224 3 279 0 0 0 chr20 61438374 61438405 -10715477 + (CA)n Simple_repeat Simple_repeat 2 32 0 2297 97 3 6 chr20 61438605 61438916 -10714966 + AluSg SINE Alu 1 310 0 252 328 8 17 chr20 61439114 61439233 -10714649 - L1ME LINE L1 -355 5807 5690 888 201 35 44 chr20 61439318 61439547 -10714335 + MER96B DNA MER1_type? 16 242 -175 25 0 0 0 chr20 61439607 61439632 -10714250 + AT_rich Low_complexity Low_complexity 1 25 0 644 259 90 19 chr20 61439684 61439896 -10713986 + MIR SINE MIR 26 252 -10 504 264 18 48 chr20 61439924 61440091 -10713791 + Charlie8 DNA MER1_type 20 181 -2236 611 153 76 35 chr20 61440175 61440319 -10713563 + MER53 DNA DNA 1 150 -39 283 152 121 0 chr20 61440318 61440384 -10713498 + MER53 DNA DNA 103 176 -13 * 256 187 120 0 chr20 61440327 61440402 -10713480 - MER53 DNA DNA -105 84 1 * 973 162 68 81 chr20 61441005 61441227 -10712655 - MER20 DNA MER1_type 0 219 1 953 48 64 0 chr20 61441275 61441400 -10712482 + MER85 DNA T2_type 2 134 -5 1163 157 23 32 chr20 61441755 61441971 -10711911 + MER20 DNA MER1_type 4 217 -2 435 68 0 0 chr20 61443875 61443934 -10709948 + (TG)n Simple_repeat Simple_repeat 2 60 0 568 244 64 24 chr20 61444311 61444495 -10709387 - MIR SINE MIR -34 228 36 256 316 89 17 chr20 61444559 61444715 -10709167 - MIR SINE MIR -70 192 16 224 167 21 0 chr20 61445641 61445689 -10708193 + GA-rich Low_complexity Low_complexity 2 50 0 30 0 0 0 chr20 61448289 61448319 -10705563 + AT_rich Low_complexity Low_complexity 1 30 0 549 303 140 27 chr20 61448592 61449005 -10704877 - L2 LINE L2 -17 3296 2837 453 296 5 9 chr20 61449072 61449221 -10704661 - MIR SINE MIR -65 143 26 * 1527 289 94 15 chr20 61449215 61450106 -10703776 - L2 LINE L2 -4 3309 2347 373 167 64 13 chr20 61450258 61450336 -10703546 - MLT1H LTR MaLR 0 549 468 230 327 62 18 chr20 61450695 61450808 -10703074 + L2 LINE L2 3123 3240 -32 2009 145 0 3 chr20 61451074 61451370 -10702512 + AluSx SINE Alu 1 295 -17 914 112 0 0 chr20 61451547 61451681 -10702201 + L1PA13 LINE L1 6030 6163 0 213 39 0 0 chr20 61451746 61451772 -10702110 + (A)n Simple_repeat Simple_repeat 1 26 0 725 237 104 73 chr20 61452205 61452492 -10701390 + MER102b DNA MER1_type 33 328 -13 248 295 41 41 chr20 61453553 61453675 -10700207 + L2 LINE L2 3119 3240 -73 1849 206 17 0 chr20 61453690 61454050 -10699832 - L1MB3 LINE L1 -2 6181 5816 2168 139 0 13 chr20 61454051 61454367 -10699515 - AluSx SINE Alu 0 312 1 1538 205 20 0 chr20 61455271 61455568 -10698314 - AluJo SINE Alu -7 305 3 222 208 312 26 chr20 61455749 61455826 -10698056 + MER5A DNA MER1_type 85 183 -6 227 279 0 144 chr20 61455860 61455971 -10697911 - MER5B DNA MER1_type -83 95 1 250 229 174 37 chr20 61455977 61456086 -10697796 + L2 LINE L2 3186 3309 -4 294 256 131 15 chr20 61456111 61456248 -10697634 - LTR16A LTR ERVL -297 153 1 498 279 101 45 chr20 61456256 61456377 -10697505 + MIR SINE MIR 1 114 -148 2113 107 55 73 chr20 61456377 61456759 -10697123 + THE1C LTR MaLR 1 375 0 498 279 101 45 chr20 61456759 61456884 -10696998 + MIR SINE MIR 114 261 -1 32 75 0 0 chr20 61456890 61456957 -10696925 + AT_rich Low_complexity Low_complexity 1 67 0 2253 105 3 7 chr20 61457546 61457876 -10696006 + AluSx SINE Alu 1 312 0 873 283 136 20 chr20 61457959 61458355 -10695527 - MLT1J LTR MaLR 0 511 70 1107 295 48 3 chr20 61458372 61458748 -10695134 + MLT1K LTR MaLR 95 487 -101 1516 172 34 0 chr20 61458857 61459119 -10694763 - MSTB1 LTR MaLR 0 432 162 225 128 51 39 chr20 61459127 61459205 -10694677 + (TA)n Simple_repeat Simple_repeat 2 80 0 367 118 34 73 chr20 61459257 61459435 -10694447 + (TA)n Simple_repeat Simple_repeat 2 172 0 377 258 34 11 chr20 61459560 61459629 -10694253 + MER5A DNA MER1_type 7 77 -112 667 200 30 0 chr20 61459629 61459764 -10694118 - MER5A DNA MER1_type 0 189 51 288 234 31 0 chr20 61459767 61459831 -10694051 - MER5A DNA MER1_type -73 116 51 * 318 222 28 28 chr20 61459826 61459898 -10693984 - MER5A DNA MER1_type -67 122 51 244 239 68 34 chr20 61459900 61459988 -10693894 - MER5A DNA MER1_type -74 115 25 * 253 270 32 0 chr20 61459969 61460032 -10693850 - MER5A DNA MER1_type -74 115 51 * 347 214 29 0 chr20 61460027 61460097 -10693785 - MER5A DNA MER1_type -67 122 51 331 207 23 58 chr20 61460095 61460182 -10693700 - MER5A DNA MER1_type -69 120 37 * 408 279 52 0 chr20 61460364 61460500 -10693382 + MLT1L LTR MaLR 473 615 0 1544 199 94 57 chr20 61460693 61461094 -10692788 - MLT1F LTR MaLR -25 517 102 2444 103 106 10 chr20 61461094 61461551 -10692331 + MER1A DNA MER1_type 1 524 -5 575 174 37 0 chr20 61461553 61461662 -10692220 - MLT1F LTR MaLR -429 113 1 266 231 0 0 chr20 61462486 61462538 -10691344 - L2 LINE L2 0 3313 3262 2412 116 134 11 chr20 61462551 61462932 -10690950 + MSTA LTR MaLR 1 428 0 325 258 254 21 chr20 61463201 61463535 -10690347 - L1ME4a LINE L1 -34 6087 5676 331 250 88 37 chr20 61463611 61463879 -10690003 - L1ME4a LINE L1 -564 5557 5272 24 53 0 0 chr20 61464016 61464054 -10689828 + AT_rich Low_complexity Low_complexity 1 38 0 261 317 53 85 chr20 61464483 61464729 -10689153 - L2 LINE L2 -614 2700 2463 262 138 17 35 chr20 61464739 61464797 -10689085 - L1ME4a LINE L1 -11 6110 6054 2207 96 0 0 chr20 61465231 61465513 -10688369 - AluY SINE Alu -13 298 17 321 296 78 65 chr20 61465751 61466184 -10687698 - L1ME4a LINE L1 -1833 4313 3875 245 458 0 0 chr20 61466262 61466393 -10687489 - L2 LINE L2 -4 3268 3138 272 316 0 0 chr20 61466834 61466913 -10686969 + MLT1L LTR MaLR 1 79 -536 417 299 82 79 chr20 61466950 61467342 -10686540 + MLT1J LTR MaLR 119 511 0 496 235 0 0 chr20 61467436 61467534 -10686348 - Tigger7 DNA MER2_type 0 2487 2390 * 1307 220 68 0 chr20 61467532 61467782 -10686100 - Tigger7 DNA MER2_type -2220 267 1 2606 137 2 71 chr20 61468437 61468849 -10685033 + MSTB LTR MaLR 6 386 -40 2345 108 0 0 chr20 61468849 61469154 -10684728 - AluSx SINE Alu -7 305 1 2606 137 2 71 chr20 61469154 61469193 -10684689 + MSTB LTR MaLR 386 426 0 955 91 15 0 chr20 61469266 61469398 -10684484 - AluY SINE Alu -5 306 173 200 246 14 43 chr20 61469876 61469945 -10683937 - MIR SINE MIR -40 222 156 2257 84 21 3 chr20 61469974 61470260 -10683622 + AluY SINE Alu 1 291 -20 1108 281 103 16 chr20 61471161 61471606 -10682276 + LTR16C LTR ERVL 6 489 -2 21 0 0 0 chr20 61472005 61472026 -10681856 + AT_rich Low_complexity Low_complexity 1 21 0 24 67 0 0 chr20 61472076 61472121 -10681761 + AT_rich Low_complexity Low_complexity 1 45 0 216 0 0 0 chr20 61472149 61472173 -10681709 + (TG)n Simple_repeat Simple_repeat 2 25 0 255 257 0 0 chr20 61472173 61472247 -10681635 + (CATA)n Simple_repeat Simple_repeat 2 75 0 817 259 34 65 chr20 61472592 61472670 -10681212 - LTR16A1 LTR ERVL -22 435 356 1561 177 64 4 chr20 61472670 61472981 -10680901 + AluJo SINE Alu 1 327 0 817 259 34 65 chr20 61472981 61473313 -10680569 - LTR16A1 LTR ERVL -101 356 35 5659 83 10 0 chr20 61473462 61474182 -10679700 + L1PB1 LINE L1 5425 6151 0 505 313 148 19 chr20 61474274 61474687 -10679195 + L2 LINE L2 2560 3048 -265 425 317 39 35 chr20 61474688 61474947 -10678935 + MLT1I LTR MaLR 1 260 -149 956 309 75 6 chr20 61474949 61475308 -10678574 - MLT2F LTR ERVL 0 663 280 244 356 42 0 chr20 61475321 61475439 -10678443 - MLT2F LTR ERVL -496 132 10 489 265 34 20 chr20 61475451 61475598 -10678284 + MLT1I LTR MaLR 261 409 0 700 284 18 44 chr20 61475599 61475874 -10678008 + L2 LINE L2 3046 3313 0 2289 104 0 7 chr20 61476574 61476871 -10677011 + AluSx SINE Alu 1 295 -17 1258 141 13 66 chr20 61477194 61477421 -10676461 - AluJb SINE Alu -5 307 93 678 279 50 96 chr20 61477425 61477883 -10675999 + MLT1K LTR MaLR 150 586 -2 657 250 65 6 chr20 61478067 61478235 -10675647 - MER5B DNA MER1_type 0 178 1 34 24 0 0 chr20 61478870 61478911 -10674971 + AT_rich Low_complexity Low_complexity 1 41 0 415 251 139 41 chr20 61479103 61479541 -10674341 - L1ME4a LINE L1 -28 6093 5613 615 273 132 9 chr20 61480083 61480157 -10673725 + MER112 DNA MER1_type 3 67 -193 333 0 0 0 chr20 61480157 61480194 -10673688 + (CA)n Simple_repeat Simple_repeat 2 38 0 615 273 132 9 chr20 61480194 61480339 -10673543 + MER112 DNA MER1_type 67 249 -11 311 128 0 0 chr20 61480391 61480438 -10673444 - L1MC5 LINE L1 -179 7782 7736 * 4606 163 34 2 chr20 61480427 61481261 -10672621 - L1MB2 LINE L1 -53 6118 5259 3377 93 16 0 chr20 61481401 61481844 -10672038 - L1PA15 LINE L1 0 6165 5716 516 253 92 77 chr20 61481959 61482295 -10671587 + MLT1L LTR MaLR 41 381 -234 232 242 125 39 chr20 61482347 61482475 -10671407 + MLT1L LTR MaLR 467 605 -10 2303 103 0 10 chr20 61482529 61482839 -10671043 - AluSc SINE Alu -2 307 1 356 257 50 10 chr20 61482868 61482969 -10670913 + MER5A DNA MER1_type 27 131 -58 1401 200 77 36 chr20 61483022 61483462 -10670420 + LTR37B LTR ERV1 9 466 -2 234 279 204 7 chr20 61483864 61484011 -10669871 + MIR SINE MIR 1 176 -86 398 344 52 0 chr20 61484057 61484211 -10669671 + MIR SINE MIR 31 192 -70 303 283 40 10 chr20 61484359 61484458 -10669424 - L2 LINE L2 -5 3308 3207 712 267 113 43 chr20 61484469 61484840 -10669042 + MER113 DNA MER1_type? 117 513 -8 21 0 0 0 chr20 61486328 61486349 -10667533 + AT_rich Low_complexity Low_complexity 1 21 0 1095 191 29 14 chr20 61486523 61486732 -10667150 + MER58A DNA MER1_type 6 217 -7 648 201 13 82 chr20 61486755 61486882 -10667000 + MIR SINE MIR 31 150 -112 2052 102 3 7 chr20 61486882 61487210 -10666672 + AluSx SINE Alu 1 327 0 648 201 13 82 chr20 61487210 61487238 -10666644 + MIR SINE MIR 150 178 -84 1307 215 102 43 chr20 61487253 61487625 -10666257 + MSTD LTR MaLR 1 394 -2 425 212 212 0 chr20 61488146 61488259 -10665623 - MER58A DNA MER1_type -1 223 87 1772 168 39 84 chr20 61488259 61488476 -10665406 - MSTB1 LTR MaLR -12 420 232 2506 72 0 3 chr20 61488476 61488781 -10665101 - AluY SINE Alu -7 304 1 1772 168 39 84 chr20 61488781 61489003 -10664879 - MSTB1 LTR MaLR -200 232 1 261 163 82 0 chr20 61489008 61489057 -10664825 - MER58A DNA MER1_type -29 78 26 541 269 122 15 chr20 61489111 61489308 -10664574 - MIR SINE MIR -44 218 1 2420 74 0 7 chr20 61489362 61489661 -10664221 - AluY SINE Alu -14 297 1 936 238 75 8 chr20 61489867 61490107 -10663775 + MER45C DNA AcHobo 4 259 -694 409 237 6 14 chr20 61490161 61490343 -10663539 + MER45C DNA AcHobo 742 953 0 565 203 158 0 chr20 61490352 61490485 -10663397 + MER5A DNA MER1_type 33 186 -3 298 267 47 55 chr20 61490591 61490761 -10663121 + MER5A DNA MER1_type 4 183 -6 270 258 15 0 chr20 61491585 61491651 -10662231 + (TATATG)n Simple_repeat Simple_repeat 4 70 0 207 204 0 0 chr20 61491803 61491852 -10662030 + (TTATA)n Simple_repeat Simple_repeat 1 49 0 610 253 146 0 chr20 61491984 61492142 -10661740 + MER5A DNA MER1_type 3 183 -6 2336 91 0 7 chr20 61492147 61492443 -10661439 + AluSc SINE Alu 3 296 -13 480 228 24 59 chr20 61492631 61492654 -10661228 + MIR SINE MIR 91 113 -149 2008 223 102 45 chr20 61492654 61493215 -10660667 - MLT1E LTR MaLR 0 593 1 480 228 24 59 chr20 61493215 61493370 -10660512 + MIR SINE MIR 113 258 -4 385 330 8 64 chr20 61493468 61493704 -10660178 - MIR SINE MIR -30 232 10 1357 227 59 59 chr20 61493867 61494307 -10659575 + MSTB2 LTR MaLR 1 440 -17 1908 177 20 20 chr20 61494401 61494751 -10659131 + MLT1A1 LTR MaLR 1 350 -15 364 273 36 14 chr20 61494883 61495022 -10658860 + MLT1J LTR MaLR 1 142 -369 259 268 161 27 chr20 61495092 61495204 -10658678 + MLT1K LTR MaLR 78 204 -384 692 309 47 44 chr20 61495221 61495584 -10658298 + MLT1K LTR MaLR 157 520 -68 216 0 0 0 chr20 61495611 61495635 -10658247 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 319 219 61 61 chr20 61495697 61495811 -10658071 + MIR SINE MIR 146 259 -3 439 260 173 34 chr20 61496045 61496253 -10657629 + MIR SINE MIR 14 250 -12 926 313 67 24 chr20 61496563 61497013 -10656869 - L2 LINE L2 -21 3292 2824 3672 83 45 10 chr20 61497164 61497679 -10656203 - L1MA1 LINE L1 0 6302 5770 198 0 0 0 chr20 61497968 61497990 -10655892 + (TTTTG)n Simple_repeat Simple_repeat 4 25 0 * 372 22 0 0 chr20 61497989 61498034 -10655848 + (TG)n Simple_repeat Simple_repeat 2 46 0 2088 98 3 7 chr20 61498034 61498319 -10655563 - AluSx SINE Alu -28 284 1 184 210 25 0 chr20 61498334 61498415 -10655467 + (TTCA)n Simple_repeat Simple_repeat 3 85 0 915 267 37 5 chr20 61498657 61498874 -10655008 + MER58A DNA MER1_type 1 224 0 2067 107 42 32 chr20 61498976 61499313 -10654569 + AluSq SINE Alu 1 340 0 322 253 0 0 chr20 61499498 61499577 -10654305 - MIR SINE MIR -137 125 47 717 162 0 22 chr20 61500584 61500720 -10653162 + L1ME1 LINE L1 6029 6161 -5 213 108 0 0 chr20 61500838 61500875 -10653007 + (A)n Simple_repeat Simple_repeat 1 37 0 250 230 264 0 chr20 61501089 61501176 -10652706 - MIR SINE MIR 0 262 153 1158 206 93 24 chr20 61501191 61501251 -10652631 - MER46C DNA MER2_type -27 311 257 1810 191 87 88 chr20 61501251 61501794 -10652088 - MLT1F LTR MaLR 0 542 1 1158 206 93 24 chr20 61501794 61502024 -10651858 - MER46C DNA MER2_type -81 257 1 239 218 0 36 chr20 61502024 61502079 -10651803 - MIR SINE MIR -108 154 102 25 31 0 0 chr20 61502244 61502276 -10651606 + AT_rich Low_complexity Low_complexity 1 32 0 715 272 97 0 chr20 61503481 61503676 -10650206 + MIR SINE MIR 48 261 -1 489 302 71 6 chr20 61503712 61503894 -10649988 - MIR SINE MIR -64 198 5 27 0 0 0 chr20 61504735 61504762 -10649120 + AT_rich Low_complexity Low_complexity 1 27 0 786 215 161 5 chr20 61504787 61504973 -10648909 - MER20 DNA MER1_type -4 215 1 852 203 46 58 chr20 61505011 61505252 -10648630 - L1MC4a LINE L1 0 7808 7571 215 123 0 154 chr20 61505260 61505390 -10648492 + (CAACC)n Simple_repeat Simple_repeat 3 112 0 400 91 0 159 chr20 61505404 61505612 -10648270 + (CAACC)n Simple_repeat Simple_repeat 3 177 0 184 57 0 151 chr20 61505626 61505732 -10648150 + (CAACC)n Simple_repeat Simple_repeat 3 92 0 268 87 0 158 chr20 61505746 61505873 -10648009 + (CAACC)n Simple_repeat Simple_repeat 3 109 0 1229 189 89 23 chr20 61505873 61506428 -10647454 - L1MD3 LINE L1 -231 7764 7008 999 238 86 45 chr20 61506428 61506810 -10647072 + MER113 DNA MER1_type? 123 520 -1 216 259 17 17 chr20 61506822 61506880 -10647002 - MIR SINE MIR -119 143 86 21 0 0 0 chr20 61507913 61507934 -10645948 + AT_rich Low_complexity Low_complexity 1 21 0 205 299 129 54 chr20 61508245 61508486 -10645396 - L2 LINE L2 -188 3084 2826 26 0 0 0 chr20 61508525 61508551 -10645331 + AT_rich Low_complexity Low_complexity 1 26 0 2480 80 0 10 chr20 61508722 61509036 -10644846 - AluSq SINE Alu -2 311 1 285 124 0 0 chr20 61509304 61509356 -10644526 - MER5A DNA MER1_type -80 98 48 1827 304 56 42 chr20 61509633 61510673 -10643209 - L2 LINE L2 -9 3304 2242 325 267 75 25 chr20 61511120 61511240 -10642642 - L2 LINE L2 -4 3268 3143 1073 261 39 47 chr20 61511274 61511680 -10642202 + MLT1I LTR MaLR 6 408 -1 22 0 0 0 chr20 61512150 61512172 -10641710 + AT_rich Low_complexity Low_complexity 1 22 0 236 283 18 62 chr20 61512234 61512347 -10641535 + L2 LINE L2 3205 3312 -1 1012 278 103 30 chr20 61513251 61513719 -10640163 - MLT1J LTR MaLR -8 503 2 937 227 96 55 chr20 61514936 61515421 -10638461 - MLT1H LTR MaLR 0 549 1 350 230 240 0 chr20 61515485 61515585 -10638297 - L2 LINE L2 -1 3312 3189 445 337 150 16 chr20 61515795 61516169 -10637713 + MLT1K LTR MaLR 165 588 0 369 0 0 0 chr20 61516801 61516842 -10637040 + (CA)n Simple_repeat Simple_repeat 2 42 0 326 225 146 22 chr20 61516893 61516982 -10636900 - MER103 DNA DNA -65 101 2 1156 207 18 14 chr20 61517066 61517288 -10636594 - MER58A DNA MER1_type -1 223 1 246 343 43 7 chr20 61517315 61517455 -10636427 + MIR SINE MIR 3 147 -115 241 196 36 54 chr20 61517478 61517534 -10636348 + MER6 DNA MER2_type 184 238 -367 22 0 0 0 chr20 61518293 61518315 -10635567 + AT_rich Low_complexity Low_complexity 1 22 0 603 214 15 8 chr20 61519888 61520019 -10633863 + MLT1I LTR MaLR 6 137 -272 409 56 14 56 chr20 61520130 61520201 -10633681 + L1PA16 LINE L1 6099 6166 0 313 186 61 13 chr20 61520226 61520301 -10633581 + MLT1I LTR MaLR 317 424 -22 2237 105 0 22 chr20 61520474 61520787 -10633095 + AluSx SINE Alu 1 306 -6 269 291 103 84 chr20 61521197 61521400 -10632482 - L2 LINE L2 0 3313 3107 309 271 21 10 chr20 61521470 61521566 -10632316 - MLT1K LTR MaLR 0 588 492 871 185 76 93 chr20 61521615 61521722 -10632160 + L1ME2 LINE L1 5858 5965 -199 2059 139 0 13 chr20 61521722 61522025 -10631857 + AluJb SINE Alu 1 299 -13 871 185 76 93 chr20 61522025 61522219 -10631663 + L1ME2 LINE L1 5965 6154 -10 226 343 68 25 chr20 61522493 61522729 -10631153 - MLT1K LTR MaLR -339 249 4 185 369 39 39 chr20 61522763 61522866 -10631016 - L2 LINE L2 -303 2969 2867 985 198 34 60 chr20 61522966 61523234 -10630648 + L1ME2 LINE L1 5874 6134 -30 27 62 0 0 chr20 61523474 61523522 -10630360 + AT_rich Low_complexity Low_complexity 1 48 0 355 355 0 22 chr20 61523710 61523848 -10630034 - L2 LINE L2 -2 3270 3136 1182 302 66 46 chr20 61523928 61524382 -10629500 - LTR16B LTR ERVL 0 464 2 449 287 31 0 chr20 61524478 61524607 -10629275 + MIR SINE MIR 130 262 0 271 307 108 18 chr20 61524810 61524976 -10628906 - L2 LINE L2 -550 2764 2584 304 307 15 58 chr20 61525008 61525178 -10628704 + MIR SINE MIR 40 206 -56 215 322 116 16 chr20 61525357 61525478 -10628404 + L2 LINE L2 3180 3312 -1 453 210 20 0 chr20 61526548 61526648 -10627234 + MER113 DNA MER1_type? 5 106 -415 662 210 111 0 chr20 61526836 61526978 -10626904 + Charlie4 DNA MER1_type 17 180 -328 3994 74 4 14 chr20 61526978 61527493 -10626389 + L1PA13 LINE L1 5650 6159 -4 662 210 111 0 chr20 61527493 61527512 -10626370 + Charlie4 DNA MER1_type 180 196 -312 441 353 26 11 chr20 61527522 61527712 -10626170 + L1MEc LINE L1 159 351 -6045 2349 244 74 54 chr20 61527725 61528095 -10625787 + L1MEc LINE L1 478 839 -5557 2108 127 11 0 chr20 61528095 61528378 -10625504 + AluSx SINE Alu 1 286 -26 216 0 0 0 chr20 61528381 61528405 -10625477 + (CATAA)n Simple_repeat Simple_repeat 2 25 0 459 52 0 0 chr20 61528406 61528464 -10625418 + (CAATA)n Simple_repeat Simple_repeat 3 60 0 2349 244 74 54 chr20 61528464 61529072 -10624810 + L1MEc LINE L1 839 1482 -4914 337 250 59 0 chr20 61529079 61529231 -10624651 + (TA)n Simple_repeat Simple_repeat 2 162 0 3116 219 82 12 chr20 61529231 61530120 -10623762 + L1ME1 LINE L1 1519 2659 -3948 * 3774 205 34 46 chr20 61530118 61530902 -10622980 + L1ME1 LINE L1 5426 6190 -256 1897 116 8 0 chr20 61530902 61531160 -10622722 + AluSx SINE Alu 40 299 -13 3774 205 34 46 chr20 61531160 61531410 -10622472 + L1ME1 LINE L1 6190 6441 -5 248 232 14 29 chr20 61531530 61531599 -10622283 - MLT1J1 LTR MaLR -318 128 61 1074 252 135 80 chr20 61532534 61533081 -10620801 - MLT1K LTR MaLR -2 586 10 2145 125 3 7 chr20 61533569 61533873 -10620009 + AluJb SINE Alu 8 310 -2 21 0 0 0 chr20 61533926 61533947 -10619935 + AT_rich Low_complexity Low_complexity 1 21 0 329 306 102 0 chr20 61534955 61535112 -10618770 - MIR SINE MIR 0 262 90 27 29 0 0 chr20 61535124 61535158 -10618724 + AT_rich Low_complexity Low_complexity 1 34 0 424 263 168 45 chr20 61535453 61535632 -10618250 + MIR SINE MIR 33 233 -29 2514 221 28 31 chr20 61535640 61536184 -10617698 + MLT1F LTR MaLR 1 542 0 198 0 0 0 chr20 61536296 61536318 -10617564 + (T)n Simple_repeat Simple_repeat 1 22 0 262 259 0 47 chr20 61537237 61537322 -10616560 - MIR SINE MIR -10 252 172 969 212 22 35 chr20 61537368 61537532 -10616350 + MER58A DNA MER1_type 2 164 -2256 1357 213 21 88 chr20 61537532 61537950 -10615932 + MLT1B LTR MaLR 1 390 0 969 212 22 35 chr20 61537950 61538011 -10615871 + MER58A DNA MER1_type 164 224 0 824 256 234 11 chr20 61538194 61538810 -10615072 + L2 LINE L2 2321 3086 -227 1005 202 49 45 chr20 61538983 61539206 -10614676 - MER58A DNA MER1_type 0 224 1 452 47 0 16 chr20 61539300 61539364 -10614518 + (TG)n Simple_repeat Simple_repeat 2 64 0 349 290 21 55 chr20 61539373 61539518 -10614364 + L2 LINE L2 3174 3313 0 1015 176 28 0 chr20 61539619 61539801 -10614081 + MER20 DNA MER1_type 33 219 0 273 239 90 124 chr20 61540004 61540326 -10613556 - MLT1J LTR MaLR -200 311 1 264 287 32 21 chr20 61540444 61540538 -10613344 + LTR16A1 LTR ERVL 1 95 -362 304 226 265 10 chr20 61540579 61540681 -10613201 + LTR16A1 LTR ERVL 330 457 0 2077 115 16 3 chr20 61541145 61541449 -10612433 + AluSg SINE Alu 1 308 -2 310 280 119 28 chr20 61541449 61541592 -10612290 + MIR SINE MIR 46 201 -61 1998 45 146 4 chr20 61542112 61542379 -10611503 + AluY SINE Alu 5 309 -2 516 273 39 0 chr20 61542550 61542704 -10611178 - LTR16A LTR ERVL -2 448 289 382 169 101 10 chr20 61542848 61542952 -10610930 - MLT1J LTR MaLR -338 173 92 658 316 4 22 chr20 61543061 61543292 -10610590 - MIR SINE MIR -23 239 13 225 289 0 13 chr20 61543314 61543390 -10610492 + MIR SINE MIR 155 229 -33 483 312 153 0 chr20 61543712 61543869 -10610013 + MER5A DNA MER1_type 9 189 0 278 258 138 60 chr20 61543960 61544127 -10609755 - MIR SINE MIR -35 227 48 233 315 0 0 chr20 61544164 61544237 -10609645 + MIR SINE MIR 167 239 -23 1050 272 66 64 chr20 61544989 61545475 -10608407 + LTR16C LTR ERVL 1 487 -4 582 313 127 71 chr20 61545563 61545605 -10608277 + LTR67 LTR ERVL 109 147 -410 4592 112 3 26 chr20 61545605 61545705 -10608177 + LTR9 LTR ERV1 1 102 -510 2232 113 13 6 chr20 61545705 61546016 -10607866 - AluSq SINE Alu 0 313 1 4592 112 3 26 chr20 61546016 61546541 -10607341 + LTR9 LTR ERV1 102 612 0 582 313 127 71 chr20 61546541 61546923 -10606959 + LTR67 LTR ERVL 147 557 0 269 280 11 32 chr20 61546954 61547047 -10606835 + L1MC/D LINE L1 5687 5777 -2031 212 256 12 0 chr20 61547163 61547249 -10606633 + (TA)n Simple_repeat Simple_repeat 1 87 0 2503 100 47 39 chr20 61547494 61547855 -10606027 + THE1B LTR MaLR 1 364 0 719 305 7 18 chr20 61549313 61549594 -10604288 + MLT1K LTR MaLR 25 336 -252 779 222 96 15 chr20 61549603 61549801 -10604081 - MER58A DNA MER1_type -9 215 2 1206 178 63 83 chr20 61549857 61550289 -10603593 + MLT1D LTR MaLR 2 505 0 243 284 0 0 chr20 61550302 61550376 -10603506 + MLT1K LTR MaLR 513 586 -2 1070 245 98 11 chr20 61550648 61550934 -10602948 + MLT1I LTR MaLR 98 408 -1 406 277 68 14 chr20 61550938 61551086 -10602796 - MER46C DNA MER2_type -87 251 96 1937 271 23 10 chr20 61551890 61552374 -10601508 - LTR16C LTR ERVL -1 490 1 276 317 12 0 chr20 61552534 61552616 -10601266 + LTR67 LTR ERVL 125 207 -350 16044 131 17 11 chr20 61553521 61555925 -10597957 - Tigger1 DNA MER2_type 0 2418 1 21 0 0 0 chr20 61556351 61556372 -10597510 + AT_rich Low_complexity Low_complexity 1 21 0 1671 166 3 48 chr20 61559384 61559698 -10594184 + AluJb SINE Alu 1 300 -12 190 290 48 65 chr20 61560231 61560479 -10593403 + L2 LINE L2 2818 3061 -211 276 280 21 21 chr20 61560703 61560796 -10593086 - MER117 DNA MER1_type 0 197 105 536 251 31 31 chr20 61560830 61561021 -10592861 - MER117 DNA MER1_type 0 197 7 396 315 38 16 chr20 61561348 61561532 -10592350 - MER117 DNA MER1_type -3 194 7 503 239 102 21 chr20 61562111 61562262 -10591620 + MER33 DNA MER1_type 1 153 -93 2092 114 21 14 chr20 61562262 61562552 -10591330 - AluSx SINE Alu -20 292 1 309 54 0 0 chr20 61562556 61562593 -10591289 + MSTA LTR MaLR 392 428 0 709 217 92 0 chr20 61562645 61562797 -10591085 + MER58A DNA MER1_type 1 166 0 2206 106 10 0 chr20 61562925 61563217 -10590665 - AluSx SINE Alu -17 295 1 1310 251 13 0 chr20 61563251 61563562 -10590320 + MER58B DNA MER1_type 27 341 0 353 287 35 0 chr20 61563563 61563678 -10590204 - L2 LINE L2 -506 2808 2690 1225 277 50 52 chr20 61564470 61564553 -10589329 + L2 LINE L2 2720 2802 -511 1100 184 18 28 chr20 61564553 61564771 -10589111 + MER20 DNA MER1_type 4 219 0 1225 277 50 52 chr20 61564771 61565278 -10588604 + L2 LINE L2 2802 3313 0 22 0 0 0 chr20 61565316 61565338 -10588544 + AT_rich Low_complexity Low_complexity 1 22 0 29 70 0 0 chr20 61565568 61565625 -10588257 + AT_rich Low_complexity Low_complexity 1 57 0 228 203 136 0 chr20 61565844 61565903 -10587979 - MIR3 SINE MIR -21 187 121 1243 264 61 33 chr20 61566028 61566456 -10587426 - MLT1K LTR MaLR -9 579 140 565 305 31 44 chr20 61567047 61567313 -10586569 - MIR SINE MIR 0 262 3 1169 159 14 36 chr20 61567763 61567983 -10585899 - MER20 DNA MER1_type -1 218 4 802 79 32 0 chr20 61568116 61568242 -10585640 + (GAAA)n Simple_repeat Simple_repeat 4 133 0 430 20 0 0 chr20 61568245 61568295 -10585587 - L1PA6 LINE L1 -206 5948 5899 * 920 37 0 0 chr20 61568293 61568400 -10585482 + L1PA5 LINE L1 6039 6145 -9 1088 69 35 6 chr20 61568409 61568583 -10585299 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 192 152 0 0 chr20 61568591 61568624 -10585258 + GA-rich Low_complexity Low_complexity 2 34 0 940 184 60 60 chr20 61568975 61569192 -10584690 - MER20 DNA MER1_type 0 219 3 1863 155 24 7 chr20 61570103 61570399 -10583483 + AluJo SINE Alu 5 305 -7 23 33 0 0 chr20 61571194 61571224 -10582658 + AT_rich Low_complexity Low_complexity 1 30 0 219 324 106 27 chr20 61572028 61572284 -10581598 + L2 LINE L2 2830 3105 -167 541 208 72 8 chr20 61572307 61572432 -10581450 + MER45A DNA AcHobo 46 178 0 199 237 0 0 chr20 61572538 61572576 -10581306 + L2 LINE L2 3203 3240 -73 1172 158 5 29 chr20 61572583 61572792 -10581090 + MER3 DNA MER1_type 1 204 -5 536 266 53 37 chr20 61574268 61574456 -10579426 + MLT1L LTR MaLR 343 533 -82 507 305 100 4 chr20 61574457 61574807 -10579075 - LTR16C LTR ERVL 0 491 85 238 415 12 0 chr20 61575079 61575161 -10578721 - L2 LINE L2 -67 3205 3123 1992 146 13 0 chr20 61575208 61575516 -10578366 + AluSx SINE Alu 1 312 0 272 226 11 0 chr20 61575516 61575609 -10578273 + GA-rich Low_complexity Low_complexity 4 97 0 1047 231 42 5 chr20 61576356 61576572 -10577310 + MER58A DNA MER1_type 1 224 0 2099 106 26 35 chr20 61576616 61576927 -10576955 + AluSx SINE Alu 1 308 -4 332 299 114 24 chr20 61577281 61577492 -10576390 + L2 LINE L2 3080 3309 -4 450 307 127 4 chr20 61577618 61577846 -10576036 - L2 LINE L2 -343 2971 2716 850 302 14 5 chr20 61578275 61578497 -10575385 - MER58A DNA MER1_type 0 224 1 694 313 28 73 chr20 61578732 61579198 -10574684 + MLT1K LTR MaLR 127 571 -17 547 300 117 7 chr20 61580181 61580471 -10573411 - MLT1J LTR MaLR -186 325 4 4325 101 2 0 chr20 61580512 61581065 -10572817 - MER41A LTR ERV1 0 554 1 306 229 51 51 chr20 61582166 61582301 -10571581 + L1MC4a LINE L1 5723 5802 -319 262 254 0 28 chr20 61582343 61582414 -10571468 + (TATG)n Simple_repeat Simple_repeat 4 72 0 840 210 79 42 chr20 61582494 61582708 -10571174 - MER58A DNA MER1_type 0 224 3 24 0 0 0 chr20 61582797 61582821 -10571061 + AT_rich Low_complexity Low_complexity 1 24 0 23 33 0 0 chr20 61582893 61582923 -10570959 + AT_rich Low_complexity Low_complexity 1 30 0 2441 59 0 0 chr20 61582968 61583254 -10570628 - L1PA8 LINE L1 -4 6168 5883 1132 171 0 0 chr20 61583331 61583501 -10570381 - FAM SINE Alu -5 170 1 727 257 34 34 chr20 61583559 61583796 -10570086 + MIR SINE MIR 23 259 -3 2262 91 10 13 chr20 61583964 61584273 -10569609 - AluSg1 SINE Alu 0 309 2 589 245 7 32 chr20 61584276 61584431 -10569451 + MLT1J LTR MaLR 44 194 -317 844 268 63 56 chr20 61584681 61585077 -10568805 - MLT1J1 LTR MaLR 0 446 48 1108 192 4 52 chr20 61585176 61585216 -10568666 - MER58A DNA MER1_type -2196 224 184 2522 52 7 10 chr20 61585216 61585523 -10568359 + AluY SINE Alu 1 306 -5 1108 192 4 52 chr20 61585523 61585711 -10568171 - MER58A DNA MER1_type -2236 184 7 251 188 0 21 chr20 61585712 61585760 -10568122 + MIR SINE MIR 211 257 -5 211 256 15 75 chr20 61585759 61585892 -10567990 + MIR SINE MIR 138 262 0 * 320 294 112 76 chr20 61586195 61586419 -10567463 + L2 LINE L2 2930 3171 -101 405 0 0 0 chr20 61586419 61586464 -10567418 + (TG)n Simple_repeat Simple_repeat 2 46 0 320 294 112 76 chr20 61586464 61586569 -10567313 + L2 LINE L2 3171 3271 -1 305 180 0 0 chr20 61586750 61586811 -10567071 + L1MD3 LINE L1 7930 7990 -5 193 244 103 13 chr20 61587643 61587721 -10566161 - MIR SINE MIR -126 136 52 1604 229 60 10 chr20 61588543 61588928 -10564954 + LTR16C LTR ERVL 84 487 -4 524 214 36 21 chr20 61589287 61589427 -10564455 + LTR67 LTR ERVL 414 555 -2 207 139 0 0 chr20 61589545 61589581 -10564301 + (TG)n Simple_repeat Simple_repeat 1 36 0 321 349 51 17 chr20 61589786 61589961 -10563921 + MIR SINE MIR 12 192 -70 2153 134 0 13 chr20 61590138 61590452 -10563430 + AluSx SINE Alu 1 310 -2 639 216 39 7 chr20 61590922 61591075 -10562807 - MER96B DNA MER1_type? 0 417 260 189 147 0 0 chr20 61591076 61591110 -10562772 + (CA)n Simple_repeat Simple_repeat 2 35 0 257 73 0 24 chr20 61591121 61591162 -10562720 + (TA)n Simple_repeat Simple_repeat 2 41 0 1232 157 42 17 chr20 61591173 61591409 -10562473 - MER96B DNA MER1_type? -164 253 12 285 29 0 0 chr20 61591710 61591744 -10562138 + (CA)n Simple_repeat Simple_repeat 1 34 0 221 254 0 17 chr20 61592139 61592198 -10561684 + (TAGA)n Simple_repeat Simple_repeat 1 58 0 24 0 0 0 chr20 61592583 61592607 -10561275 + AT_rich Low_complexity Low_complexity 1 24 0 248 298 18 0 chr20 61593000 61593057 -10560825 + Charlie8 DNA MER1_type 1 58 -2359 1067 258 54 46 chr20 61593109 61593478 -10560404 + Charlie8 DNA MER1_type 57 428 -1989 793 271 10 0 chr20 61593531 61593730 -10560152 - MIR SINE MIR 0 262 62 325 301 109 68 chr20 61594336 61594568 -10559314 + L2 LINE L2 2284 2538 -776 813 179 0 22 chr20 61594568 61594702 -10559180 + FLAM_A SINE Alu 2 132 -1 325 301 109 68 chr20 61594702 61594835 -10559047 + L2 LINE L2 2538 2664 -650 645 234 102 34 chr20 61594990 61595225 -10558657 + MIR SINE MIR 1 251 -11 181 200 0 25 chr20 61595191 61595231 -10558651 + L2 LINE L2 3263 3301 -12 * 905 187 73 73 chr20 61595995 61596214 -10557668 + MER20 DNA MER1_type 1 219 0 251 269 0 0 chr20 61596366 61596418 -10557464 - L2 LINE L2 -8 3305 3254 467 73 15 0 chr20 61596441 61596509 -10557373 + (TAGA)n Simple_repeat Simple_repeat 4 72 0 580 305 135 3 chr20 61596537 61596860 -10557022 - L2 LINE L2 -176 3137 2758 1111 113 6 40 chr20 61597439 61597616 -10556266 - AluSg/x SINE Alu 0 312 142 200 324 28 0 chr20 61597627 61597698 -10556184 + L2 LINE L2 2714 2786 -528 206 316 18 0 chr20 61598848 61598905 -10554977 + L2 LINE L2 3214 3271 -1 2185 114 61 22 chr20 61599768 61600129 -10553753 - THE1C LTR MaLR 0 375 1 646 338 28 42 chr20 61600518 61600876 -10553006 - LTR67 LTR ERVL -11 546 194 379 241 70 57 chr20 61601208 61601366 -10552516 + MIR SINE MIR 35 194 -68 1782 133 25 73 chr20 61601467 61601783 -10552099 + AluJo SINE Alu 1 301 -11 752 258 206 11 chr20 61601820 61602169 -10551713 + MLT1H LTR MaLR 133 549 0 322 306 125 0 chr20 61604163 61604307 -10549575 - MIR SINE MIR -1 261 100 256 268 55 67 chr20 61604318 61604482 -10549400 - L2 LINE L2 -661 2653 2492 441 217 11 11 chr20 61604626 61604718 -10549164 - LTR40a LTR ERVL -109 410 319 817 138 6 94 chr20 61604724 61604818 -10549064 + LTR40b LTR ERVL 317 393 -69 1834 126 0 108 chr20 61604818 61605159 -10548723 + AluSx SINE Alu 1 304 -8 817 138 6 94 chr20 61605159 61605224 -10548658 + LTR40b LTR ERVL 393 462 0 32 26 0 0 chr20 61605250 61605289 -10548593 + AT_rich Low_complexity Low_complexity 1 39 0 2077 109 41 3 chr20 61605466 61605760 -10548122 + AluSq SINE Alu 1 305 -8 344 306 109 20 chr20 61605831 61605978 -10547904 - L2 LINE L2 -1 3271 3112 220 315 10 112 chr20 61606169 61606366 -10547516 - L2 LINE L2 -467 2847 2671 492 215 8 46 chr20 61606394 61606524 -10547358 - MER20 DNA MER1_type -7 212 88 374 275 107 27 chr20 61607262 61607411 -10546471 - MIR SINE MIR -43 219 59 1695 194 38 0 chr20 61607427 61607747 -10546135 - MER58B DNA MER1_type 0 341 10 381 239 18 44 chr20 61607764 61607877 -10546005 + MIR SINE MIR 14 123 -139 706 318 99 3 chr20 61607888 61608190 -10545692 - LTR16C LTR ERVL -12 479 149 1964 147 13 0 chr20 61608360 61608659 -10545223 + AluJo SINE Alu 5 307 -5 470 216 8 90 chr20 61608716 61608820 -10545062 + MER96B DNA MER1_type? 2 94 -323 2152 106 3 19 chr20 61608820 61609132 -10544750 - AluSq SINE Alu 0 313 7 470 216 8 90 chr20 61609132 61609161 -10544721 + MER96B DNA MER1_type? 94 124 -293 2063 145 0 0 chr20 61609164 61609467 -10544415 + AluSx SINE Alu 1 303 -9 310 50 138 12 chr20 61609467 61609547 -10544335 + (TAAAG)n Simple_repeat Simple_repeat 2 91 0 468 148 17 52 chr20 61609549 61609664 -10544218 - MER96B DNA MER1_type? -113 304 194 893 139 0 0 chr20 61610037 61610166 -10543716 - L1PA16 LINE L1 -9 6157 6029 2410 74 0 3 chr20 61610167 61610464 -10543418 - AluY SINE Alu -15 296 1 1383 205 50 7 chr20 61610501 61610784 -10543098 - AluJb SINE Alu -13 299 5 1031 155 24 4 chr20 61610788 61610974 -10542908 - L1PA16 LINE L1 -126 6040 5854 762 201 17 34 chr20 61610983 61611162 -10542720 - MER96B DNA MER1_type? -240 177 2 185 206 0 0 chr20 61611553 61611587 -10542295 - MIR SINE MIR -7 255 222 381 43 0 0 chr20 61611604 61611651 -10542231 + (CA)n Simple_repeat Simple_repeat 1 47 0 195 42 0 0 chr20 61612515 61612539 -10541343 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 2239 119 0 0 chr20 61615038 61615341 -10538541 + AluSg1 SINE Alu 1 303 -6 333 68 0 0 chr20 61615341 61615385 -10538497 + (GGAA)n Simple_repeat Simple_repeat 1 44 0 1604 145 46 28 chr20 61615528 61615811 -10538071 - AluJo SINE Alu -19 293 6 204 40 0 0 chr20 61615882 61615907 -10537975 + (T)n Simple_repeat Simple_repeat 1 25 0 622 285 36 25 chr20 61616145 61616419 -10537463 + L1MC4a LINE L1 5512 5788 -2020 426 259 119 22 chr20 61616419 61616604 -10537278 + L1MC4a LINE L1 5709 5911 -1897 593 242 0 8 chr20 61616662 61616790 -10537092 + L2 LINE L2 3187 3313 0 1340 260 183 87 chr20 61617352 61618152 -10535730 + HAL1 LINE L1 1 724 -1783 1830 154 0 24 chr20 61618152 61618444 -10535438 - AluJb SINE Alu -27 285 1 1340 260 183 87 chr20 61618444 61619188 -10534694 + HAL1 LINE L1 724 1692 -815 262 350 122 25 chr20 61619659 61619856 -10534026 + L2 LINE L2 2572 2787 -527 2674 94 14 19 chr20 61619983 61620346 -10533536 + THE1B LTR MaLR 4 364 0 432 213 118 29 chr20 61620929 61621065 -10532817 - MER63 DNA MER1_type -282 780 7 850 262 62 79 chr20 61621082 61621563 -10532319 + MLT1K LTR MaLR 1 473 -3 389 268 16 16 chr20 61622216 61622343 -10531539 - LTR67 LTR ERVL -3 554 428 596 240 11 56 chr20 61622610 61622646 -10531236 - MER5B DNA MER1_type -4 174 138 3775 62 13 7 chr20 61622646 61623096 -10530786 - MLT2A2 LTR ERVL 0 453 1 596 240 11 56 chr20 61623096 61623238 -10530644 - MER5B DNA MER1_type -40 138 4 1669 123 16 78 chr20 61624018 61624326 -10529556 - L1MB1 LINE L1 0 6168 5880 1589 140 0 8 chr20 61624326 61624562 -10529320 - MSTA LTR MaLR -6 422 189 1520 77 0 39 chr20 61624562 61624769 -10529113 - AluSp SINE Alu -6 307 109 303 210 25 25 chr20 61624927 61625008 -10528874 - L1MC4a LINE L1 -1913 5895 5815 259 164 33 0 chr20 61625042 61625103 -10528779 + (TA)n Simple_repeat Simple_repeat 1 63 0 851 281 138 6 chr20 61625103 61625452 -10528430 - L1MC4a LINE L1 -2002 5806 5412 218 200 80 0 chr20 61625959 61626009 -10527873 - MIR3 SINE MIR -39 169 116 405 173 36 36 chr20 61626079 61626189 -10527693 - L1MD3 LINE L1 -1 7994 7885 2246 85 7 7 chr20 61626295 61626589 -10527293 - AluSq SINE Alu -19 294 1 295 189 57 82 chr20 61626927 61627049 -10526833 - MLT1J LTR MaLR -323 188 70 432 0 0 0 chr20 61627188 61627236 -10526646 + (TC)n Simple_repeat Simple_repeat 1 48 0 2103 140 0 0 chr20 61627237 61627530 -10526352 - AluSx SINE Alu -19 293 1 766 301 57 59 chr20 61628198 61628620 -10525262 + MLT1L LTR MaLR 148 568 -47 24 32 0 0 chr20 61628758 61628789 -10525093 + AT_rich Low_complexity Low_complexity 1 31 0 30 27 0 0 chr20 61629009 61629046 -10524836 + AT_rich Low_complexity Low_complexity 1 37 0 2436 97 0 3 chr20 61629054 61629362 -10524520 - AluSq SINE Alu -6 307 1 1354 221 32 25 chr20 61629362 61629642 -10524240 - AluJo SINE Alu -30 282 1 187 154 26 26 chr20 61629842 61629881 -10524001 + L2 LINE L2 1104 1142 -2172 337 240 273 13 chr20 61630250 61630400 -10523482 - MLT1K LTR MaLR 0 588 400 2178 110 7 0 chr20 61630444 61630736 -10523146 - AluSx SINE Alu -18 294 1 345 226 12 12 chr20 61630744 61630828 -10523054 - HAL1 LINE L1 -4 2503 2420 * 1120 254 145 30 chr20 61630816 61631312 -10522570 - HAL1 LINE L1 -295 2212 1660 1391 242 15 15 chr20 61631374 61631655 -10522227 + L1ME1 LINE L1 5792 6075 -91 5023 94 11 2 chr20 61631655 61632293 -10521589 - LTR9B LTR ERV1 0 644 1 1391 242 15 15 chr20 61632293 61632337 -10521545 + L1ME1 LINE L1 6074 6117 -49 2885 224 29 24 chr20 61632405 61632979 -10520903 + MER82 DNA MER2_type 27 606 -47 2396 126 53 5 chr20 61632979 61633359 -10520523 - MER48 LTR ERV1 0 398 1 2885 224 29 24 chr20 61633359 61633408 -10520474 + MER82 DNA MER2_type 606 653 0 1947 142 10 7 chr20 61633436 61633746 -10520136 + AluJb SINE Alu 1 311 -1 2920 245 76 81 chr20 61633746 61634466 -10519416 - HAL1 LINE L1 -952 1555 844 1726 118 24 0 chr20 61634466 61634720 -10519162 - AluSx SINE Alu -24 288 29 2920 245 76 81 chr20 61634720 61635403 -10518479 - HAL1 LINE L1 -1663 844 159 715 202 40 45 chr20 61635403 61635601 -10518281 - LTR37A LTR ERV1 0 426 230 378 140 0 0 chr20 61635602 61635659 -10518223 - MLT1D LTR MaLR -1 504 448 3936 95 122 5 chr20 61635668 61636259 -10517623 - MER4A LTR ERV1 0 664 5 1979 163 95 29 chr20 61636309 61636721 -10517161 - MLT1D LTR MaLR -66 439 1 659 202 60 77 chr20 61636721 61636951 -10516931 - LTR37A LTR ERV1 -193 233 8 241 278 52 10 chr20 61636958 61637055 -10516827 - HAL1 LINE L1 -2345 162 62 228 241 17 0 chr20 61637102 61637160 -10516722 - MLT1K LTR MaLR -172 416 358 25 31 0 0 chr20 61637194 61637226 -10516656 + AT_rich Low_complexity Low_complexity 1 32 0 2158 109 14 7 chr20 61637247 61637540 -10516342 - AluSx SINE Alu -17 295 1 1913 174 52 98 chr20 61637735 61638236 -10515646 + MLT1D LTR MaLR 12 489 -16 371 175 50 0 chr20 61638264 61638344 -10515538 + LTR37A LTR ERV1 234 317 -109 * 661 162 77 0 chr20 61638335 61638452 -10515430 + MLT1D LTR MaLR 342 467 -38 2283 123 0 0 chr20 61638472 61638782 -10515100 - AluSx SINE Alu -2 310 1 3621 245 16 36 chr20 61638883 61639193 -10514689 - L1M4c LINE L1 -4457 1927 1612 1987 139 21 0 chr20 61639193 61639481 -10514401 - AluSx SINE Alu -18 294 1 3621 245 16 36 chr20 61639481 61640411 -10513471 - L1M4c LINE L1 -4772 1612 799 893 272 47 51 chr20 61640569 61640986 -10512896 - L1M4c LINE L1 -5523 780 174 354 342 79 5 chr20 61641262 61641452 -10512430 + MIR SINE MIR 59 262 0 321 210 16 16 chr20 61641637 61641699 -10512183 - MER81 DNA DNA -38 76 15 186 189 0 0 chr20 61641811 61641848 -10512034 + (ATG)n Simple_repeat Simple_repeat 2 38 0 2221 122 0 0 chr20 61641876 61642179 -10511703 - AluSx SINE Alu -9 303 1 270 200 0 0 chr20 61642184 61642234 -10511648 - MIR SINE MIR -41 221 172 934 115 0 0 chr20 61642384 61642514 -10511368 - AluSg/x SINE Alu -3 309 180 226 301 60 12 chr20 61642533 61642616 -10511266 - MER5A DNA MER1_type -65 124 38 2316 145 24 19 chr20 61642791 61643163 -10510719 - THE1C LTR MaLR 0 375 2 9383 103 113 5 chr20 61643169 61644589 -10509293 - THE1C-int LTR MaLR -6 1574 1 1461 119 37 67 chr20 61644589 61644632 -10509250 - THE1C LTR MaLR 0 375 332 2246 101 27 7 chr20 61644632 61644929 -10508953 + AluSx SINE Alu 1 303 -9 1461 119 37 67 chr20 61644929 61645154 -10508728 - THE1C LTR MaLR -43 332 115 40 59 0 0 chr20 61645391 61645459 -10508423 + AT_rich Low_complexity Low_complexity 1 68 0 605 252 50 0 chr20 61645516 61645675 -10508207 - MIR SINE MIR -31 231 65 360 257 264 7 chr20 61645806 61645954 -10507928 - MER5A DNA MER1_type 0 189 4 221 257 95 14 chr20 61645960 61646034 -10507848 - MIR SINE MIR -64 144 65 1879 162 0 58 chr20 61646129 61646456 -10507426 - AluJb SINE Alu -3 309 2 546 244 69 18 chr20 61646569 61646786 -10507096 - LTR16C LTR ERVL 0 491 264 1230 172 138 82 chr20 61646790 61647144 -10506738 - MLT1A2 LTR MaLR 0 374 1 1305 194 30 30 chr20 61647155 61647459 -10506423 + MER33 DNA MER1_type 1 304 -20 931 95 0 0 chr20 61647461 61647587 -10506295 - AluSp/q SINE Alu 0 313 188 206 246 18 18 chr20 61649282 61649339 -10504543 + CT-rich Low_complexity Low_complexity 2 58 0 2359 88 0 10 chr20 61649440 61649748 -10504134 - AluSg SINE Alu -1 309 5 2364 129 36 17 chr20 61650036 61650393 -10503489 + THE1B LTR MaLR 1 364 0 2317 105 0 0 chr20 61650561 61650856 -10503026 - AluSc SINE Alu -13 296 2 582 180 17 151 chr20 61650860 61651099 -10502783 - L1MA9 LINE L1 -3 6288 6082 29 0 0 0 chr20 61651144 61651173 -10502709 + AT_rich Low_complexity Low_complexity 1 29 0 1839 133 9 75 chr20 61651184 61651515 -10502367 + MER1B DNA MER1_type 31 339 0 987 182 35 0 chr20 61651515 61651685 -10502197 + AluJb SINE Alu 116 291 -21 611 63 0 0 chr20 61651826 61651905 -10501977 + L1MA1 LINE L1 6224 6302 0 1907 172 0 3 chr20 61651970 61652272 -10501610 - AluJo SINE Alu -11 301 1 188 83 0 56 chr20 61654203 61654239 -10499643 + (TTCTCC)n Simple_repeat Simple_repeat 5 38 0 1386 213 113 3 chr20 61654914 61655224 -10498658 - MER2 DNA MER2_type 0 344 1 208 279 59 26 chr20 61655392 61655514 -10498368 - MER5A DNA MER1_type -8 170 56 1099 100 0 13 chr20 61655695 61655845 -10498037 - AluY SINE Alu -163 148 1 1847 174 6 0 chr20 61655846 61656168 -10497714 - L1MA8 LINE L1 -256 6035 5712 1214 122 6 6 chr20 61656170 61656350 -10497532 - L1M2 LINE L1 -505 5786 5607 2054 128 0 7 chr20 61656526 61656814 -10497068 - AluSx SINE Alu -24 288 3 716 246 44 52 chr20 61658225 61658473 -10495409 - MIR SINE MIR -16 246 1 2349 160 27 7 chr20 61658874 61659280 -10494602 + MSTB LTR MaLR 1 414 -12 311 294 24 40 chr20 61659345 61659471 -10494411 + LTR67 LTR ERVL 434 557 0 413 254 45 52 chr20 61659514 61659648 -10494234 - MIR SINE MIR -99 163 31 420 285 13 46 chr20 61659759 61659910 -10493972 + MIR SINE MIR 106 251 -11 2440 69 7 3 chr20 61659989 61660292 -10493590 + AluY SINE Alu 1 304 -7 21 0 0 0 chr20 61660293 61660314 -10493568 + AT_rich Low_complexity Low_complexity 1 21 0 244 330 50 0 chr20 61660542 61660642 -10493240 + MIR SINE MIR 47 151 -111 984 176 5 54 chr20 61660919 61661123 -10492759 + MER3 DNA MER1_type 3 196 -13 826 161 0 39 chr20 61661392 61661522 -10492360 - FLAM_A SINE Alu -8 125 1 526 236 0 0 chr20 61662214 61662303 -10491579 - FLAM_A SINE Alu -48 94 6 600 156 21 0 chr20 61662853 61662949 -10490933 - MER81 DNA DNA -16 98 1 1716 164 17 7 chr20 61663087 61663379 -10490503 + AluJo SINE Alu 15 309 -3 1559 241 71 10 chr20 61663400 61663794 -10490088 - LTR16C LTR ERVL 0 491 74 325 70 0 0 chr20 61663812 61663855 -10490027 + MADE1 DNA Mariner 1 43 -37 701 276 106 9 chr20 61663994 61664324 -10489558 - MER113 DNA MER1_type? -1 520 159 2127 127 37 0 chr20 61664559 61664859 -10489023 + AluSx SINE Alu 2 312 0 2097 96 18 7 chr20 61666038 61666344 -10487538 - AluSq SINE Alu 0 310 2 249 294 90 28 chr20 61666880 61667057 -10486825 - L1MC4a LINE L1 -1860 5948 5761 390 21 0 0 chr20 61667088 61667135 -10486747 + (TC)n Simple_repeat Simple_repeat 2 48 0 470 191 19 0 chr20 61667135 61667240 -10486642 + (CATA)n Simple_repeat Simple_repeat 2 108 0 1842 166 0 0 chr20 61667240 61667530 -10486352 - AluJb SINE Alu -22 290 1 2317 115 3 0 chr20 61667682 61667994 -10485888 - AluSp SINE Alu 0 313 1 275 288 23 30 chr20 61668488 61668620 -10485262 + GA-rich Low_complexity Low_complexity 1 131 0 26 30 0 0 chr20 61668789 61668822 -10485060 + AT_rich Low_complexity Low_complexity 1 33 0 41 21 0 0 chr20 61668837 61668885 -10484997 + AT_rich Low_complexity Low_complexity 1 48 0 818 208 44 6 chr20 61669519 61669702 -10484180 - MER21B LTR ERV1 -371 492 303 958 275 102 23 chr20 61670178 61670651 -10483231 + LTR67 LTR ERVL 42 551 -6 225 262 142 14 chr20 61670788 61670929 -10482953 + L1MB7 LINE L1 5366 5524 -597 635 288 11 0 chr20 61670978 61671155 -10482727 + L1MB7 LINE L1 5606 5784 -337 2165 125 47 33 chr20 61671196 61671555 -10482327 + THE1B LTR MaLR 1 364 0 1939 153 137 11 chr20 61671984 61672364 -10481518 + MSTA LTR MaLR 1 428 0 2480 77 0 0 chr20 61672948 61673246 -10480636 - AluY SINE Alu -12 299 2 231 36 0 0 chr20 61673491 61673504 -10480378 + (CA)n Simple_repeat Simple_repeat 1 41 0 231 36 0 0 chr20 61673504 61673532 -10480350 + (CA)n Simple_repeat Simple_repeat 2 29 0 606 269 81 79 chr20 61673802 61674285 -10479597 + MLT1J LTR MaLR 3 486 -25 670 178 22 15 chr20 61674298 61674433 -10479449 - L1MB5 LINE L1 0 6174 6039 413 301 148 10 chr20 61674528 61674724 -10479158 + MLT1K LTR MaLR 17 239 -349 372 319 96 26 chr20 61674775 61675004 -10478878 + MLT1K LTR MaLR 326 570 -18 209 195 61 85 chr20 61675026 61675040 -10478842 - MIR SINE MIR -104 158 145 222 105 0 0 chr20 61675040 61675078 -10478804 + (TAG)n Simple_repeat Simple_repeat 1 38 0 209 195 61 85 chr20 61675078 61675145 -10478737 - MIR SINE MIR -117 145 79 296 309 52 22 chr20 61676021 61676157 -10477725 - LTR67 LTR ERVL -2 555 416 243 210 17 41 chr20 61676422 61676525 -10477357 - MLT1J2 LTR MaLR -121 383 263 1230 270 128 30 chr20 61676583 61677371 -10476511 + L2 LINE L2 2430 3313 0 261 301 111 42 chr20 61677680 61677942 -10475940 - MLT1J LTR MaLR -1 510 231 1540 166 24 3 chr20 61678324 61678613 -10475269 + L1MB7 LINE L1 5889 6183 -1 1998 126 28 0 chr20 61678622 61678908 -10474974 + AluSx SINE Alu 1 294 -18 392 271 97 0 chr20 61679365 61679509 -10474373 - MER5B DNA MER1_type -7 171 14 821 227 74 0 chr20 61679517 61679720 -10474162 + MER20 DNA MER1_type 2 219 0 2578 136 42 58 chr20 61679873 61679915 -10473967 + L1MB1 LINE L1 5399 5440 -728 1743 142 26 33 chr20 61679915 61680218 -10473664 + AluJo SINE Alu 1 301 -11 2578 136 42 58 chr20 61680218 61680674 -10473208 + L1MB1 LINE L1 5440 5889 -279 1274 62 68 31 chr20 61680674 61680866 -10473016 + MSTA LTR MaLR 1 199 -229 898 74 0 0 chr20 61680867 61680975 -10472907 + AluSp SINE Alu 1 108 -205 10169 115 8 39 chr20 61680975 61682175 -10471707 + Tigger1 DNA MER2_type 880 2115 -303 1883 132 25 65 chr20 61682175 61682389 -10471493 + L1PB4 LINE L1 5816 6037 -119 2087 114 0 4 chr20 61682389 61682669 -10471213 + AluSx SINE Alu 1 279 -33 453 19 0 0 chr20 61682669 61682723 -10471159 + (CA)n Simple_repeat Simple_repeat 1 54 0 1883 132 25 65 chr20 61682723 61682862 -10471020 + L1PB4 LINE L1 6035 6156 0 2421 104 0 0 chr20 61682864 61683171 -10470711 + AluSg SINE Alu 1 307 -3 10169 115 8 39 chr20 61683171 61683555 -10470327 + Tigger1 DNA MER2_type 2116 2418 0 1022 197 71 92 chr20 61683775 61683844 -10470038 + LTR37A LTR ERV1 55 124 -302 1729 161 0 52 chr20 61683844 61684154 -10469728 - AluJb SINE Alu -18 294 1 1022 197 71 92 chr20 61684154 61684464 -10469418 + LTR37A LTR ERV1 124 426 0 397 304 74 66 chr20 61684480 61684602 -10469280 + L1M4 LINE L1 2998 3117 -3029 2495 79 0 7 chr20 61684602 61684907 -10468975 + AluSc SINE Alu 1 303 -6 397 304 74 66 chr20 61684907 61685268 -10468614 + L1M4 LINE L1 3117 3485 -2661 3564 112 34 43 chr20 61685542 61685677 -10468205 - Tigger3(Golem) DNA MER2_type -130 2899 2764 1771 139 56 4 chr20 61685677 61685968 -10467914 + AluJb SINE Alu 3 307 0 3564 112 34 43 chr20 61685968 61686457 -10467425 - Tigger3(Golem) DNA MER2_type -265 2764 2280 490 184 18 97 chr20 61686450 61686480 -10467402 - Tigger3(Golem) DNA MER2_type -494 108 77 * 4907 32 2 0 chr20 61686480 61687046 -10466836 + L1PA3 LINE L1 5588 6154 -1 490 184 18 97 chr20 61687046 61687129 -10466753 - Tigger3(Golem) DNA MER2_type -525 77 4 415 282 46 46 chr20 61687134 61687350 -10466532 + L1M4 LINE L1 3723 3938 -2208 737 128 0 0 chr20 61687511 61687613 -10466269 - AluSg/x SINE Alu -17 293 192 267 312 96 0 chr20 61687712 61687837 -10466045 + L1M4 LINE L1 4067 4203 -1943 1713 119 0 25 chr20 61688037 61688281 -10465601 + AluSq SINE Alu 1 238 -75 1900 137 7 0 chr20 61688745 61689030 -10464852 + AluSx SINE Alu 23 309 -3 240 134 75 0 chr20 61690028 61690095 -10463787 + (TATG)n Simple_repeat Simple_repeat 1 72 0 356 212 78 101 chr20 61690198 61690231 -10463651 + L1ME4a LINE L1 5946 5978 -143 2383 82 10 0 chr20 61690231 61690523 -10463359 + AluY SINE Alu 1 295 -16 356 212 78 101 chr20 61690523 61690668 -10463214 + L1ME4a LINE L1 5978 6120 -1 2071 113 52 0 chr20 61692074 61692365 -10461517 + AluSx SINE Alu 1 306 -6 397 333 28 60 chr20 61694517 61694769 -10459113 - MIR SINE MIR 0 262 19 1085 211 36 0 chr20 61695031 61695225 -10458657 + MER58A DNA MER1_type 10 210 -14 1613 212 72 38 chr20 61695249 61695720 -10458162 - Charlie4a DNA MER1_type -5 503 17 283 313 96 9 chr20 61696007 61696122 -10457760 + L2 LINE L2 3146 3270 -2 376 268 153 53 chr20 61696659 61696887 -10456995 + MLT1H LTR MaLR 196 446 -103 233 281 21 31 chr20 61696972 61697068 -10456814 + MLT1H-int LTR MaLR 1 95 -1276 4011 44 2 0 chr20 61697975 61698451 -10455431 - L1PA7 LINE L1 0 6154 5678 474 242 108 103 chr20 61698698 61698728 -10455154 + MLT1H LTR MaLR 1 29 -520 2226 114 3 3 chr20 61698728 61699034 -10454848 + AluSx SINE Alu 1 306 -6 474 242 108 103 chr20 61699034 61699549 -10454333 + MLT1H LTR MaLR 29 549 0 1002 120 0 0 chr20 61699873 61700006 -10453876 + AluSq/x SINE Alu 1 133 -179 1655 162 72 3 chr20 61700009 61700299 -10453583 + AluSx SINE Alu 1 310 -2 27 0 0 0 chr20 61700911 61700938 -10452944 + AT_rich Low_complexity Low_complexity 1 27 0 506 290 71 22 chr20 61701053 61701236 -10452646 + MLT1J LTR MaLR 58 249 -262 382 267 40 62 chr20 61701371 61701547 -10452335 + MLT1J LTR MaLR 339 510 -1 204 40 0 0 chr20 61701751 61701776 -10452106 + (T)n Simple_repeat Simple_repeat 1 25 0 272 255 102 0 chr20 61701840 61701938 -10451944 - L1ME LINE L1 -269 5852 5745 2248 114 0 0 chr20 61702320 61702619 -10451263 + AluSx SINE Alu 1 299 -13 2429 85 0 3 chr20 61702649 61702955 -10450927 + AluY SINE Alu 1 305 -6 2419 102 0 0 chr20 61703383 61703696 -10450186 + AluSp SINE Alu 1 313 0 24 32 0 0 chr20 61704146 61704177 -10449705 + AT_rich Low_complexity Low_complexity 1 31 0 1474 132 143 8 chr20 61704333 61704598 -10449284 + AluJb SINE Alu 1 301 -1 244 229 181 44 chr20 61704695 61704906 -10448976 - L1ME LINE L1 -560 5602 5397 3420 166 28 54 chr20 61705081 61705842 -10448040 + L1MC4 LINE L1 7300 8040 -2 388 263 79 9 chr20 61706432 61706546 -10447336 + MLT1L LTR MaLR 168 289 -326 337 215 0 35 chr20 61706628 61706726 -10447156 + MLT1L LTR MaLR 239 392 -184 1775 155 0 4 chr20 61706756 61707021 -10446861 - AluJb SINE Alu -9 303 40 2325 114 0 0 chr20 61707347 61707655 -10446227 + AluSq SINE Alu 1 308 -5 544 171 0 24 chr20 61707774 61707897 -10445985 + CT-rich Low_complexity Low_complexity 3 122 0 250 200 0 0 chr20 61708050 61708100 -10445782 + MER113 DNA MER1_type? 4 53 -468 470 231 81 25 chr20 61708218 61708378 -10445504 - HsTC2 DNA Tc2 0 1900 1732 2270 277 69 5 chr20 61708388 61708707 -10445175 - HsTC2 DNA Tc2 -1061 837 540 1110 163 11 5 chr20 61708707 61708891 -10444991 + MER5A DNA MER1_type 4 188 -1 2270 277 69 5 chr20 61708891 61709326 -10444556 - HsTC2 DNA Tc2 -1358 540 35 379 296 95 6 chr20 61709342 61709521 -10444361 + MIR SINE MIR 57 251 -11 290 221 156 0 chr20 61709600 61709677 -10444205 + MER81 DNA DNA 1 89 -25 691 147 40 85 chr20 61709953 61710076 -10443806 - L1 LINE L1 -878 5268 5154 2267 105 3 0 chr20 61710076 61710370 -10443512 + AluSp SINE Alu 1 295 -18 691 147 40 85 chr20 61710370 61710423 -10443459 - L1 LINE L1 -992 5154 5100 2365 103 0 0 chr20 61710474 61710774 -10443108 + AluSx SINE Alu 1 300 -12 320 283 30 0 chr20 61710912 61711011 -10442871 + MIR SINE MIR 107 208 -54 866 235 53 39 chr20 61711038 61711323 -10442559 - L2 LINE L2 -4 3309 3021 483 194 0 0 chr20 61711651 61711754 -10442128 + (TG)n Simple_repeat Simple_repeat 1 103 0 2003 103 0 0 chr20 61711793 61712054 -10441828 - AluSx SINE Alu -11 301 41 2222 109 3 0 chr20 61712057 61712351 -10441531 - AluSx SINE Alu -17 295 1 369 58 0 0 chr20 61712491 61712543 -10441339 + (TG)n Simple_repeat Simple_repeat 2 53 0 331 232 86 20 chr20 61712545 61712663 -10441219 + MIR SINE MIR 37 166 -42 671 305 120 20 chr20 61712955 61713296 -10440586 - L1MEd LINE L1 -5736 383 9 1856 166 7 3 chr20 61713609 61713910 -10439972 + AluJo SINE Alu 1 302 -10 2078 134 3 7 chr20 61713950 61714255 -10439627 - AluSx SINE Alu -8 304 1 278 296 41 46 chr20 61714266 61714462 -10439420 + L2 LINE L2 3117 3311 -2 2376 93 10 0 chr20 61714508 61714809 -10439073 + AluSx SINE Alu 1 304 -8 300 271 75 0 chr20 61714891 61714998 -10438884 - L1ME LINE L1 -262 5859 5745 303 248 44 68 chr20 61715211 61715418 -10438464 - L1P5 LINE L1 -689 5462 5255 1892 142 0 0 chr20 61715420 61715726 -10438156 - AluSx SINE Alu 0 307 2 1991 98 14 0 chr20 61715867 61716142 -10437740 + AluSx SINE Alu 1 279 -33 416 209 27 45 chr20 61716425 61716535 -10437347 + FLAM_A SINE Alu 1 108 -25 183 151 94 0 chr20 61716691 61716744 -10437138 - MER5A DNA MER1_type -83 106 49 2861 7 0 0 chr20 61716810 61717113 -10436769 - AluYb8 SINE Alu -15 303 1 231 251 215 36 chr20 61717810 61718033 -10435849 + MLT1L LTR MaLR 310 572 -43 2347 100 0 3 chr20 61718055 61718366 -10435516 + AluSg SINE Alu 1 310 0 225 331 33 25 chr20 61718422 61718543 -10435339 + MER5A DNA MER1_type 68 189 0 807 236 83 21 chr20 61718562 61718803 -10435079 + MIR SINE MIR 7 262 0 232 283 0 0 chr20 61718849 61718909 -10434973 + L2 LINE L2 2722 2781 -533 2302 142 28 17 chr20 61719293 61719653 -10434229 + THE1B LTR MaLR 1 364 0 296 299 75 30 chr20 61719753 61719887 -10433995 - L2 LINE L2 -6 3307 3168 2216 181 114 35 chr20 61719969 61720537 -10433345 - MER90 LTR ERV1 0 614 2 274 243 57 0 chr20 61720775 61720845 -10433037 - L2 LINE L2 -213 3059 2986 198 0 0 0 chr20 61720852 61720874 -10433008 + (A)n Simple_repeat Simple_repeat 1 22 0 195 182 114 0 chr20 61720895 61720939 -10432943 - L2 LINE L2 -8 3264 3216 692 324 19 0 chr20 61720998 61721208 -10432674 - MIR SINE MIR -37 225 12 2225 96 0 52 chr20 61721222 61721546 -10432336 - AluSg SINE Alu -3 307 1 486 286 60 18 chr20 61721971 61722139 -10431743 - MER5B DNA MER1_type -1 177 3 501 270 60 40 chr20 61722385 61722585 -10431297 - MIR SINE MIR -50 212 9 1900 167 0 0 chr20 61722742 61723053 -10430829 + AluJo SINE Alu 2 312 0 288 323 190 6 chr20 61723277 61723435 -10430447 - L2 LINE L2 -212 3060 2874 300 319 84 18 chr20 61723445 61723611 -10430271 - L2 LINE L2 -180 3092 2916 1592 151 41 14 chr20 61724159 61724450 -10429432 - AluSx SINE Alu -13 299 1 303 234 13 52 chr20 61724624 61724701 -10429181 + Charlie8 DNA MER1_type 192 265 -2152 421 305 99 74 chr20 61724710 61724933 -10428949 - L1ME2 LINE L1 -167 5997 5781 1821 151 3 3 chr20 61724933 61725232 -10428650 - AluJo SINE Alu -13 299 1 421 305 99 74 chr20 61725232 61725326 -10428556 - L1ME2 LINE L1 -383 5781 5691 2090 123 0 0 chr20 61725326 61725628 -10428254 - AluSx SINE Alu -10 302 1 421 305 99 74 chr20 61725628 61725712 -10428170 - L1ME2 LINE L1 -473 5691 5585 2237 97 0 0 chr20 61725884 61726183 -10427699 - AluSq SINE Alu -12 301 3 263 261 126 32 chr20 61726962 61727100 -10426782 - MER5A DNA MER1_type -1 177 15 2282 89 0 0 chr20 61727644 61727937 -10425945 + AluSq SINE Alu 1 293 -20 299 244 97 43 chr20 61728309 61728455 -10425427 + MLT1L LTR MaLR 242 318 -193 269 234 13 26 chr20 61728509 61728586 -10425296 + MLT1K LTR MaLR 507 582 -6 2336 74 3 13 chr20 61728609 61728921 -10424961 - AluY SINE Alu -2 309 1 181 258 0 65 chr20 61728978 61729040 -10424842 + L2 LINE L2 3251 3308 -5 1718 96 0 20 chr20 61729046 61729295 -10424587 + AluSg SINE Alu 52 295 -15 636 295 104 53 chr20 61729297 61729434 -10424448 - L1ME4a LINE L1 -21 6100 5971 1933 101 22 4 chr20 61729434 61729712 -10424170 + AluSc SINE Alu 11 293 -16 636 295 104 53 chr20 61729712 61729777 -10424105 - L1ME4a LINE L1 -150 5971 5911 2257 83 7 0 chr20 61729777 61730078 -10423804 - AluSp SINE Alu -10 303 1 636 295 104 53 chr20 61730078 61730305 -10423577 - L1ME4a LINE L1 -210 5911 5648 336 256 108 57 chr20 61731121 61731297 -10422585 - MER5A DNA MER1_type -4 185 1 790 199 36 0 chr20 61732617 61732783 -10421099 - MER5A DNA MER1_type -12 177 6 305 239 113 143 chr20 61732784 61733041 -10420841 + L2 LINE L2 2823 3086 -227 651 88 0 0 chr20 61733041 61733132 -10420750 + (TTTTC)n Simple_repeat Simple_repeat 5 95 0 305 239 113 143 chr20 61733132 61733149 -10420733 + L2 LINE L2 3086 3102 -211 1201 153 172 19 chr20 61733149 61733411 -10420471 - AluJo SINE Alu 0 302 1 305 239 113 143 chr20 61733411 61733638 -10420244 + L2 LINE L2 3102 3310 -3 230 232 0 137 chr20 61733680 61733775 -10420107 - L2 LINE L2 -11 3302 3221 370 181 53 53 chr20 61733796 61733890 -10419992 + L1MCa LINE L1 1972 2065 -4361 186 67 67 0 chr20 61733895 61733940 -10419942 + (TA)n Simple_repeat Simple_repeat 1 48 0 1848 40 22 0 chr20 61733948 61734173 -10419709 - L1PA8 LINE L1 -1 6171 5942 342 324 63 7 chr20 61734237 61734379 -10419503 - L2 LINE L2 -256 3057 2908 379 293 85 18 chr20 61734436 61734600 -10419282 + L2 LINE L2 2911 3085 -228 353 238 99 0 chr20 61734690 61734791 -10419091 - L1ME3 LINE L1 -56 6106 5996 1899 127 20 3 chr20 61734800 61735099 -10418783 + AluSx SINE Alu 1 304 -8 279 282 54 74 chr20 61735182 61735331 -10418551 - MER5B DNA MER1_type -7 171 26 * 406 301 26 46 chr20 61735203 61735356 -10418526 + MER5A DNA MER1_type 40 189 0 727 273 40 47 chr20 61735359 61735612 -10418270 + MIR SINE MIR 12 262 0 525 195 39 23 chr20 61735605 61735733 -10418149 + L2 LINE L2 3149 3278 -35 * 273 130 0 0 chr20 61735916 61735962 -10417920 - HSMAR2 DNA Mariner -59 1243 1198 2037 117 0 7 chr20 61735963 61736253 -10417629 - AluSx SINE Alu -18 294 7 252 230 92 61 chr20 61736264 61736460 -10417422 - L1ME4a LINE L1 0 6121 5920 282 176 68 0 chr20 61736598 61736672 -10417210 + MER116 DNA Mariner 2 80 0 1721 132 68 0 chr20 61736699 61736980 -10416902 - AluSx SINE Alu -12 300 1 931 106 8 0 chr20 61736980 61737112 -10416770 - AluSg SINE Alu -177 133 1 1434 230 78 60 chr20 61737118 61737566 -10416316 + MLT1J LTR MaLR 47 502 -9 247 291 194 10 chr20 61737626 61737729 -10416153 - MER5A DNA MER1_type -22 167 46 228 316 162 22 chr20 61737627 61737763 -10416119 + MER5A DNA MER1_type 35 189 0 * 237 214 60 94 chr20 61737774 61737852 -10416030 - L1ME4a LINE L1 -302 5819 5745 2043 115 0 3 chr20 61737852 61738140 -10415742 - AluSg SINE Alu -15 295 9 237 214 60 94 chr20 61738140 61738178 -10415704 - L1ME4a LINE L1 -376 5745 5707 536 316 47 5 chr20 61738526 61738719 -10415163 + Charlie8 DNA MER1_type 75 275 -2142 27 0 0 0 chr20 61738914 61738941 -10414941 + AT_rich Low_complexity Low_complexity 1 27 0 268 119 0 0 chr20 61738968 61739010 -10414872 - Tigger5 DNA MER2_type -186 2137 2096 279 244 37 12 chr20 61739021 61739103 -10414779 - MIR SINE MIR -82 180 97 1549 154 75 0 chr20 61739149 61739448 -10414434 + AluJo SINE Alu 1 319 0 1436 220 16 76 chr20 61739705 61739900 -10413982 - MER47B DNA MER2_type -1905 418 213 2052 131 0 3 chr20 61739900 61740187 -10413695 + AluSx SINE Alu 1 288 -24 213 65 0 0 chr20 61740187 61740218 -10413664 + (CATA)n Simple_repeat Simple_repeat 2 32 0 1436 220 16 76 chr20 61740228 61740477 -10413405 - MER47B DNA MER2_type -2110 213 1 311 281 79 9 chr20 61740559 61740673 -10413209 + L2 LINE L2 3192 3313 0 1099 237 111 29 chr20 61741123 61741473 -10412409 + LTR33A LTR ERVL 145 523 0 2288 70 0 10 chr20 61742152 61742451 -10411431 - AluY SINE Alu 0 311 16 363 44 0 0 chr20 61742507 61742552 -10411330 + (TGAA)n Simple_repeat Simple_repeat 1 45 0 605 269 171 5 chr20 61742616 61742832 -10411050 + MIR SINE MIR 7 258 -4 1805 126 42 7 chr20 61742859 61743144 -10410738 + AluSq SINE Alu 1 295 -18 626 192 122 23 chr20 61743155 61743327 -10410555 + L1MD3 LINE L1 7796 7984 -11 1879 100 107 4 chr20 61743334 61743614 -10410268 + AluSc SINE Alu 1 309 0 474 322 21 28 chr20 61743912 61744098 -10409784 + MIR SINE MIR 10 196 -63 2118 104 7 0 chr20 61744120 61744409 -10409473 + AluSp SINE Alu 1 291 -22 1912 139 0 0 chr20 61744502 61744803 -10409079 + AluSx SINE Alu 1 301 0 484 219 149 0 chr20 61744936 61745050 -10408832 + MER69 DNA AcHobo 17 147 -1079 284 170 21 0 chr20 61745077 61745124 -10408758 + MER69 DNA AcHobo 2476 2523 -3 254 261 157 9 chr20 61745225 61745340 -10408542 + MIR SINE MIR 22 153 -109 692 261 96 64 chr20 61745781 61745903 -10407979 + MIR SINE MIR 2 119 -143 1658 92 125 21 chr20 61745903 61746184 -10407698 + AluYa8 SINE Alu 1 310 0 692 261 96 64 chr20 61746184 61746310 -10407572 + MIR SINE MIR 119 258 -4 2081 136 0 3 chr20 61746347 61746657 -10407225 - AluSx SINE Alu -3 309 1 2303 90 0 0 chr20 61746687 61746998 -10406884 - AluY SINE Alu 0 311 1 201 195 0 0 chr20 61747067 61747108 -10406774 + (TATG)n Simple_repeat Simple_repeat 4 44 0 274 287 114 21 chr20 61747111 61747487 -10406395 - L1M4 LINE L1 -2653 3493 3083 2304 65 0 3 chr20 61747551 61747843 -10406039 - AluSg SINE Alu -10 300 10 192 222 22 0 chr20 61747896 61747941 -10405941 + MIR SINE MIR 99 144 -118 935 203 11 6 chr20 61748103 61748280 -10405602 - MER45A DNA AcHobo 0 178 1 280 292 56 0 chr20 61749026 61749115 -10404767 - MIR SINE MIR -158 104 11 2018 148 0 3 chr20 61749132 61749435 -10404447 + AluJb SINE Alu 1 302 -10 1971 102 3 54 chr20 61749559 61749873 -10404009 - AluSp SINE Alu -15 298 1 284 261 92 42 chr20 61749880 61749999 -10403883 - MIR SINE MIR -106 156 32 2399 61 0 0 chr20 61750015 61750310 -10403572 - AluY SINE Alu -16 295 1 2154 116 0 10 chr20 61750863 61751173 -10402709 - AluSg SINE Alu -3 307 1 502 100 9 0 chr20 61751497 61751573 -10402309 + L1MB1 LINE L1 5754 5837 -352 2056 126 7 0 chr20 61751573 61751882 -10402000 + AluSx SINE Alu 1 311 -1 502 100 9 0 chr20 61751882 61751896 -10401986 + L1MB1 LINE L1 5837 5849 -340 356 203 47 86 chr20 61752383 61752460 -10401422 + Charlie5 DNA MER1_type 5 77 -2547 2047 103 17 3 chr20 61752460 61752760 -10401122 - AluSx SINE Alu -8 304 1 356 203 47 86 chr20 61752760 61752810 -10401072 + Charlie5 DNA MER1_type 77 127 -2497 1183 173 9 77 chr20 61752874 61753087 -10400795 + Charlie5 DNA MER1_type 2238 2423 -201 2456 44 0 0 chr20 61753087 61753382 -10400500 - AluY SINE Alu -16 295 1 1183 173 9 77 chr20 61753382 61753492 -10400390 + Charlie5 DNA MER1_type 2423 2539 -85 686 241 0 0 chr20 61753493 61753634 -10400248 - FLAM_A SINE Alu -1 141 1 254 182 14 84 chr20 61753716 61753835 -10400047 + A-rich Low_complexity Low_complexity 4 113 -23 2145 119 6 0 chr20 61753835 61754146 -10399736 + AluSq SINE Alu 1 313 0 254 182 14 84 chr20 61754146 61754169 -10399713 + A-rich Low_complexity Low_complexity 113 136 0 342 138 0 0 chr20 61754190 61754248 -10399634 + (TCC)n Simple_repeat Simple_repeat 3 60 0 601 210 0 36 chr20 61754250 61754388 -10399494 - FLAM_A SINE Alu 0 133 1 268 167 0 17 chr20 61754388 61754448 -10399434 + Charlie5 DNA MER1_type 2494 2552 -60 915 180 0 12 chr20 61754453 61754620 -10399262 + AluJo SINE Alu 123 287 -25 211 172 17 17 chr20 61754638 61754696 -10399186 + A-rich Low_complexity Low_complexity 4 61 0 374 172 43 11 chr20 61754696 61754789 -10399093 + Charlie5 DNA MER1_type 2469 2564 -48 1753 121 62 17 chr20 61754790 61755080 -10398802 - AluJo SINE Alu -9 303 1 389 266 199 41 chr20 61755129 61755400 -10398482 + L2 LINE L2 2995 3308 -5 207 0 0 0 chr20 61755695 61755718 -10398164 + (A)n Simple_repeat Simple_repeat 1 23 0 2198 117 0 0 chr20 61756908 61757216 -10396666 + AluSx SINE Alu 1 308 -4 1537 282 58 6 chr20 61757618 61758101 -10395781 - MLT1J LTR MaLR -3 508 1 2172 99 76 17 chr20 61758161 61758505 -10395377 + THE1B LTR MaLR 1 364 0 185 258 97 65 chr20 61758548 61758641 -10395241 - L2 LINE L2 0 3313 3218 2165 96 0 13 chr20 61758740 61759041 -10394841 - AluSg1 SINE Alu -12 297 1 269 267 78 11 chr20 61759178 61759268 -10394614 - MIR SINE MIR -24 238 143 1557 110 4 9 chr20 61759268 61759496 -10394386 - AluSg/x SINE Alu -20 292 66 449 183 69 53 chr20 61759499 61759630 -10394252 + L1ME4a LINE L1 5986 6118 -3 2179 96 3 0 chr20 61759634 61759936 -10393946 + AluSx SINE Alu 1 303 -9 1762 153 7 23 chr20 61760266 61760573 -10393309 - AluJo SINE Alu -10 302 1 31 0 0 0 chr20 61760895 61760926 -10392956 + AT_rich Low_complexity Low_complexity 1 31 0 847 107 23 15 chr20 61761153 61761284 -10392598 - AluSq/x SINE Alu -178 134 3 23 0 0 53 chr20 61761432 61761450 -10392432 + AT_rich Low_complexity Low_complexity 1 18 -18 2181 69 3 7 chr20 61761450 61761740 -10392142 + AluY SINE Alu 1 289 -22 23 0 0 53 chr20 61761740 61761759 -10392123 + AT_rich Low_complexity Low_complexity 18 36 0 1845 156 3 0 chr20 61761766 61762061 -10391821 + AluJb SINE Alu 5 300 -12 1976 130 3 7 chr20 61762309 61762610 -10391272 + AluSx SINE Alu 1 300 -12 242 254 32 107 chr20 61762630 61762687 -10391195 + L1MC4a LINE L1 5779 5839 -1969 2398 71 6 0 chr20 61762687 61762998 -10390884 + AluSp SINE Alu 1 313 0 242 254 32 107 chr20 61762998 61763126 -10390756 + L1MC4a LINE L1 5839 5943 -1865 2047 108 0 54 chr20 61763126 61763441 -10390441 + AluSx SINE Alu 1 298 -14 242 254 32 107 chr20 61763441 61763506 -10390376 + L1MC4a LINE L1 5943 6011 -1797 21 36 0 0 chr20 61764015 61764043 -10389839 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr20 61764097 61764125 -10389757 + AT_rich Low_complexity Low_complexity 1 28 0 845 164 84 70 chr20 61764862 61764996 -10388886 + MER20 DNA MER1_type 1 132 -87 2140 76 35 3 chr20 61764996 61765284 -10388598 + AluSp SINE Alu 1 297 -16 327 25 0 0 chr20 61765284 61765324 -10388558 + (CA)n Simple_repeat Simple_repeat 2 41 0 845 164 84 70 chr20 61765324 61765401 -10388481 + MER20 DNA MER1_type 131 216 -3 452 167 12 130 chr20 61766064 61766220 -10387662 + MER96B DNA MER1_type? 32 169 -243 1681 156 0 33 chr20 61766220 61766522 -10387360 + AluJo SINE Alu 1 292 -20 1673 170 0 7 chr20 61766548 61766836 -10387046 + AluJo SINE Alu 1 286 -26 297 209 0 15 chr20 61766865 61766932 -10386950 + MER96B DNA MER1_type? 177 242 -175 1944 130 13 3 chr20 61767265 61767566 -10386316 - AluSx SINE Alu -8 304 1 1091 89 0 38 chr20 61768099 61768234 -10385648 + AluSx SINE Alu 2 132 -180 2205 106 7 0 chr20 61768234 61768536 -10385346 + AluSg SINE Alu 1 304 -6 1091 89 0 38 chr20 61768536 61768558 -10385324 + AluSx SINE Alu 132 153 -159 376 75 0 0 chr20 61768558 61768611 -10385271 + Alu SINE Alu 248 300 0 2152 78 3 10 chr20 61769135 61769428 -10384454 + AluSq SINE Alu 1 291 -22 2144 117 0 0 chr20 61769453 61769753 -10384129 - AluSx SINE Alu -12 300 1 2052 136 26 37 chr20 61769794 61769893 -10383989 + L1MB1 LINE L1 5754 5853 -315 1990 138 0 6 chr20 61769893 61770204 -10383678 - AluJb SINE Alu -3 309 1 2052 136 26 37 chr20 61770204 61770486 -10383396 + L1MB1 LINE L1 5853 6131 -37 1853 132 20 7 chr20 61770498 61770794 -10383088 + AluSx SINE Alu 13 312 0 21 0 0 0 chr20 61770998 61771019 -10382863 + AT_rich Low_complexity Low_complexity 1 21 0 455 196 31 0 chr20 61771091 61771188 -10382694 - L1MB5 LINE L1 0 6174 6075 1761 146 31 0 chr20 61771553 61771841 -10382041 - AluJb SINE Alu -11 301 5 232 313 0 12 chr20 61772781 61772861 -10381021 + A-rich Low_complexity Low_complexity 1 79 0 203 235 0 15 chr20 61774096 61774164 -10379718 + CT-rich Low_complexity Low_complexity 1 67 0 2195 109 0 0 chr20 61774168 61774472 -10379410 - AluSx SINE Alu -8 304 1 2172 92 0 3 chr20 61774496 61774790 -10379092 + AluSg SINE Alu 1 293 -17 399 185 6 51 chr20 61774790 61774936 -10378946 + CT-rich Low_complexity Low_complexity 13 153 0 2164 64 3 7 chr20 61775340 61775622 -10378260 + AluSp SINE Alu 1 281 -32 1547 168 75 14 chr20 61775806 61776164 -10377718 - Zaphod DNA AcHobo -50 3981 3602 235 156 133 0 chr20 61776190 61776235 -10377647 - MER58 DNA MER1_type -15 2405 2355 49 37 0 12 chr20 61776257 61776278 -10377604 + AT_rich Low_complexity Low_complexity 1 21 -59 1810 149 3 20 chr20 61776278 61776573 -10377309 + AluJo SINE Alu 1 290 -22 49 37 0 12 chr20 61776573 61776632 -10377250 + AT_rich Low_complexity Low_complexity 21 80 0 403 227 34 11 chr20 61776635 61776811 -10377071 + (TA)n Simple_repeat Simple_repeat 1 180 0 2114 235 162 36 chr20 61776882 61776916 -10376966 - Zaphod DNA AcHobo -3043 988 960 2359 54 3 0 chr20 61776916 61777210 -10376672 - AluY SINE Alu -16 295 1 2114 235 162 36 chr20 61777210 61777541 -10376341 - Zaphod DNA AcHobo -3071 960 672 1913 126 3 16 chr20 61777541 61777851 -10376031 + AluSx SINE Alu 1 306 -6 2114 235 162 36 chr20 61777851 61778262 -10375620 - Zaphod DNA AcHobo -3359 672 86 1841 146 0 26 chr20 61778262 61778571 -10375311 - AluJb SINE Alu -11 301 1 2114 235 162 36 chr20 61778571 61778670 -10375212 - Zaphod DNA AcHobo -3945 86 1 362 304 103 49 chr20 61778717 61779008 -10374874 - Charlie8 DNA MER1_type -1021 1396 15 1909 137 0 7 chr20 61779084 61779377 -10374505 - AluSx SINE Alu -21 291 1 1779 144 0 45 chr20 61779508 61779820 -10374062 + AluJb SINE Alu 1 298 -14 346 253 131 73 chr20 61780154 61780210 -10373672 + MIR SINE MIR 4 55 -207 2047 131 0 0 chr20 61780210 61780507 -10373375 + AluSx SINE Alu 3 299 -13 346 253 131 73 chr20 61780507 61780695 -10373187 + MIR SINE MIR 55 262 0 327 228 63 13 chr20 61780729 61780808 -10373074 - Zaphod DNA AcHobo -3948 83 1 275 247 0 52 chr20 61781126 61781203 -10372679 - MER5A DNA MER1_type -72 117 45 403 187 18 10 chr20 61781359 61781456 -10372426 - L1M4 LINE L1 -2263 3883 3783 610 238 110 71 chr20 61781598 61781644 -10372238 - Charlie2 DNA MER1_type 0 2862 2819 1025 167 12 6 chr20 61781644 61781812 -10372070 - FAM SINE Alu -6 169 1 2151 111 0 3 chr20 61781817 61782114 -10371768 - AluSg SINE Alu -14 296 1 610 238 110 71 chr20 61782114 61782433 -10371449 - Charlie2 DNA MER1_type -46 2816 2412 2059 93 0 24 chr20 61782433 61782743 -10371139 - AluSg SINE Alu 0 303 1 610 238 110 71 chr20 61782743 61782868 -10371014 - Charlie2 DNA MER1_type -450 2412 2293 248 309 0 0 chr20 61783300 61783368 -10370514 + (TG)n Simple_repeat Simple_repeat 2 69 0 1654 201 0 0 chr20 61783369 61783663 -10370219 - AluJo SINE Alu -18 294 1 357 269 22 30 chr20 61783719 61783853 -10370029 - L1MC/D LINE L1 -2038 5770 5638 502 268 18 104 chr20 61784104 61784231 -10369651 - MIR SINE MIR -3 259 167 1704 166 30 0 chr20 61784231 61784533 -10369349 + AluJo SINE Alu 1 311 -1 502 268 18 104 chr20 61784533 61784685 -10369197 - MIR SINE MIR -95 167 4 2021 90 32 0 chr20 61784743 61785047 -10368835 - AluSx SINE Alu 0 313 1 1452 169 4 4 chr20 61785048 61785296 -10368586 - L1MD3 LINE L1 -18 7977 7730 285 292 154 15 chr20 61785940 61786070 -10367812 - L2 LINE L2 0 3313 3166 225 0 0 0 chr20 61786100 61786125 -10367757 + (TTTA)n Simple_repeat Simple_repeat 1 25 0 2006 135 0 0 chr20 61786150 61786454 -10367428 - AluSx SINE Alu -8 304 1 334 269 51 0 chr20 61786459 61786537 -10367345 - L2 LINE L2 -3 3310 3229 813 194 30 0 chr20 61786597 61786762 -10367120 - AluSg/x SINE Alu -2 308 139 259 351 26 0 chr20 61786769 61786846 -10367036 - L2 LINE L2 -240 3073 2995 731 178 8 16 chr20 61786846 61786975 -10366907 + AluJo SINE Alu 9 136 -176 269 268 35 56 chr20 61787024 61787166 -10366716 - L2 LINE L2 -339 2975 2837 798 204 182 0 chr20 61787404 61787580 -10366302 + MER58A DNA MER1_type 8 215 -9 927 107 0 0 chr20 61787581 61787702 -10366180 + FLAM_C SINE Alu 1 121 -22 378 360 65 5 chr20 61787771 61787971 -10365911 - L2 LINE L2 -570 2744 2533 4090 198 117 29 chr20 61787979 61788640 -10365242 + L1MC4a LINE L1 6656 7446 -362 2387 61 3 6 chr20 61788640 61788951 -10364931 + AluY SINE Alu 2 311 0 4090 198 117 29 chr20 61788951 61789349 -10364533 + L1MC4a LINE L1 7446 7808 0 694 175 0 70 chr20 61789512 61789655 -10364227 + FLAM_C SINE Alu 1 133 0 379 319 86 4 chr20 61789970 61790201 -10363681 - MIR SINE MIR 0 262 55 261 297 55 41 chr20 61790400 61790718 -10363164 - L1ME LINE L1 -660 5506 5181 352 93 0 19 chr20 61790718 61790772 -10363110 - Alu SINE Alu -4 296 244 1061 158 10 67 chr20 61790800 61790841 -10363041 + AluJb SINE Alu 106 148 -164 2488 47 0 0 chr20 61790841 61791138 -10362744 + AluY SINE Alu 1 297 -14 1061 158 10 67 chr20 61791138 61791305 -10362577 + AluJb SINE Alu 148 302 -10 1994 142 0 3 chr20 61791306 61791609 -10362273 + AluSx SINE Alu 1 302 -10 229 271 17 17 chr20 61791647 61791706 -10362176 + L2 LINE L2 3205 3263 -9 2260 76 3 0 chr20 61792100 61792389 -10361493 + AluSp SINE Alu 1 290 -23 779 261 20 0 chr20 61793298 61793501 -10360381 + L1ME4a LINE L1 5522 5728 -393 813 183 30 0 chr20 61793511 61793675 -10360207 + FAM SINE Alu 1 42 -7 405 272 140 52 chr20 61793710 61793982 -10359900 + L1ME4a LINE L1 5822 6117 -4 1733 154 0 39 chr20 61794084 61794389 -10359493 + AluSx SINE Alu 1 293 -19 1207 56 0 0 chr20 61794742 61794885 -10358997 + AluSg1 SINE Alu 1 143 -166 2316 67 3 0 chr20 61794887 61795186 -10358696 + AluSp SINE Alu 1 300 -13 410 185 49 0 chr20 61795205 61795286 -10358596 + L1MD1 LINE L1 6134 6218 -24 396 219 27 0 chr20 61795300 61795373 -10358509 - MER58A DNA MER1_type -32 75 1 238 299 112 19 chr20 61795417 61795524 -10358358 + MLT1H LTR MaLR 59 175 -374 276 217 54 124 chr20 61795680 61795809 -10358073 + MLT1H LTR MaLR 430 549 0 2284 92 0 0 chr20 61796015 61796319 -10357563 + AluSq SINE Alu 1 304 -9 237 171 0 0 chr20 61796466 61796501 -10357381 - Tigger2a DNA MER2_type -4 440 406 1258 139 151 41 chr20 61796504 61796749 -10357133 - Tigger2a DNA MER2_type -149 285 14 1660 162 17 3 chr20 61796751 61797041 -10356841 - AluJo SINE Alu -13 299 6 1854 159 0 0 chr20 61797519 61797808 -10356074 + AluSx SINE Alu 1 289 -23 2038 116 14 0 chr20 61797999 61798291 -10355591 + AluSx SINE Alu 1 296 -16 3635 84 43 63 chr20 61798551 61798985 -10354897 + L1MA4A LINE L1 5692 6133 -170 2445 71 0 0 chr20 61798985 61799294 -10354588 - AluSg SINE Alu -1 309 1 3635 84 43 63 chr20 61799294 61799367 -10354515 + L1MA4A LINE L1 6133 6206 -97 2112 87 21 0 chr20 61799367 61799654 -10354228 + AluSq SINE Alu 1 293 -20 3635 84 43 63 chr20 61799654 61799765 -10354117 + L1MA4A LINE L1 6206 6299 -4 606 136 29 0 chr20 61799881 61799984 -10353898 - L1MD2 LINE L1 -5 6354 6249 338 192 0 39 chr20 61800026 61800104 -10353778 - AluJ/FRAM SINE Alu -1 301 227 1599 157 15 4 chr20 61800317 61800585 -10353297 - AluJo SINE Alu -41 271 1 896 154 0 0 chr20 61801007 61801137 -10352745 - FLAM_C SINE Alu -1 132 3 216 0 0 0 chr20 61801145 61801169 -10352713 + (T)n Simple_repeat Simple_repeat 1 24 0 2333 67 0 0 chr20 61801240 61801539 -10352343 - AluY SINE Alu -12 299 1 2015 138 0 0 chr20 61801593 61801891 -10351991 - AluSx SINE Alu -14 298 1 719 200 0 0 chr20 61801984 61802109 -10351773 - FLAM_C SINE Alu -17 126 2 1103 207 177 8 chr20 61802110 61802477 -10351405 + Charlie4a DNA MER1_type 63 491 -17 717 138 23 0 chr20 61802636 61802766 -10351116 + FLAM_C SINE Alu 1 133 0 2013 120 37 0 chr20 61803182 61803481 -10350401 + AluSx SINE Alu 1 310 -2 206 282 176 12 chr20 61803527 61803612 -10350270 + MIR SINE MIR 51 149 -113 443 221 146 44 chr20 61803802 61803960 -10349922 - MER45A DNA AcHobo -1 177 4 274 256 12 24 chr20 61803975 61804057 -10349825 - MER5B DNA MER1_type -3 175 95 453 229 92 0 chr20 61804849 61805064 -10348818 + L1MA9 LINE L1 5961 6291 -21 2080 103 7 3 chr20 61805082 61805374 -10348508 + AluSq SINE Alu 1 293 -20 593 240 35 12 chr20 61805477 61805648 -10348234 - MER96B DNA MER1_type? -2 415 241 342 204 182 0 chr20 61805750 61805838 -10348044 - MER96B DNA MER1_type? -313 104 1 479 272 18 9 chr20 61806175 61806289 -10347593 - FLAM_A SINE Alu -19 123 9 640 189 88 110 chr20 61806363 61806591 -10347291 + MER58A DNA MER1_type 2 224 0 694 210 58 0 chr20 61807131 61807269 -10346613 + MER58A DNA MER1_type 22 167 0 247 226 65 32 chr20 61808503 61808596 -10345286 - L1ME3A LINE L1 -88 6082 5987 720 179 148 6 chr20 61809839 61810001 -10343881 - MIR SINE MIR -64 198 14 23 0 0 0 chr20 61810204 61810227 -10343655 + AT_rich Low_complexity Low_complexity 1 23 0 2459 50 0 3 chr20 61810904 61811203 -10342679 - AluY SINE Alu -13 298 1 722 232 84 0 chr20 61811353 61811543 -10342339 - HAL1 LINE L1 -775 1732 1527 1288 150 18 73 chr20 61813807 61813884 -10339998 + L1MC1 LINE L1 6051 6131 -202 1854 143 10 10 chr20 61813884 61814185 -10339697 + AluJb SINE Alu 1 301 -11 1288 150 18 73 chr20 61814185 61814393 -10339489 + L1MC1 LINE L1 6131 6320 -13 2034 106 0 0 chr20 61814944 61815217 -10338665 + AluSg SINE Alu 1 273 -37 1268 201 83 52 chr20 61815245 61815533 -10338349 + AluJo SINE Alu 1 297 -5 703 169 0 0 chr20 61815642 61815760 -10338122 + FLAM_C SINE Alu 2 119 -24 24 67 0 0 chr20 61815760 61815805 -10338077 + AT_rich Low_complexity Low_complexity 1 45 0 2300 88 0 7 chr20 61816131 61816437 -10337445 + AluSp SINE Alu 1 304 -9 938 197 106 5 chr20 61816633 61816831 -10337051 - MER20 DNA MER1_type 0 219 2 1674 145 16 30 chr20 61816993 61817297 -10336585 + AluSx SINE Alu 1 300 -12 261 271 168 32 chr20 61817395 61817550 -10336332 + MLT1I LTR MaLR 60 235 -174 2081 105 3 7 chr20 61817569 61817865 -10336017 - AluSx SINE Alu -17 295 1 954 255 59 0 chr20 61817867 61818157 -10335725 + Charlie4a DNA MER1_type 1 307 -201 361 227 21 41 chr20 61818219 61818316 -10335566 - MER5A DNA MER1_type -77 112 18 1287 156 107 27 chr20 61818914 61819202 -10334680 + AluJo SINE Alu 11 312 0 501 247 47 20 chr20 61819574 61819724 -10334158 + MLT1J LTR MaLR 33 186 -325 250 220 198 11 chr20 61820214 61820305 -10333577 - MER20 DNA MER1_type -45 174 67 424 169 88 128 chr20 61820985 61821036 -10332846 - MER58B DNA MER1_type -2080 340 288 2047 137 0 0 chr20 61821036 61821336 -10332546 + AluSx SINE Alu 5 304 -8 424 169 88 128 chr20 61821336 61821432 -10332450 - MER58B DNA MER1_type -2132 288 199 301 213 38 62 chr20 61821669 61821749 -10332133 + L2 LINE L2 3145 3222 -50 2210 88 0 16 chr20 61821879 61822185 -10331697 - AluSx SINE Alu -11 301 1 1226 179 40 26 chr20 61822217 61822490 -10331392 + AluJo SINE Alu 5 281 -31 885 81 16 0 chr20 61822491 61822615 -10331267 + AluSp/q SINE Alu 176 301 -12 2179 96 0 13 chr20 61823147 61823448 -10330434 + AluSg SINE Alu 1 297 -13 381 264 191 32 chr20 61823573 61823793 -10330089 - MER5C DNA MER1_type -1 323 69 423 248 160 42 chr20 61823833 61824240 -10329642 + L1MC5 LINE L1 7431 7885 -76 298 174 130 0 chr20 61824245 61824314 -10329568 - MER116 DNA Mariner -2 78 1 1930 86 16 0 chr20 61824423 61824679 -10329203 - AluY SINE Alu -16 295 36 * 2114 119 0 0 chr20 61824678 61824971 -10328911 - AluSx SINE Alu -19 293 1 459 258 194 11 chr20 61825114 61825300 -10328582 + MIR SINE MIR 4 223 -39 899 223 23 27 chr20 61825403 61825623 -10328259 + MER20 DNA MER1_type 1 219 0 264 325 70 18 chr20 61825638 61825752 -10328130 + MER5A DNA MER1_type 1 120 -69 1449 140 6 119 chr20 61825806 61826134 -10327748 - AluJb SINE Alu -21 291 1 546 211 121 42 chr20 61826200 61826262 -10327620 + MER5A DNA MER1_type 9 65 -124 1585 104 93 62 chr20 61826262 61826551 -10327331 + AluSc SINE Alu 1 298 -11 546 211 121 42 chr20 61826551 61826654 -10327228 + MER5A DNA MER1_type 65 187 -2 940 201 17 6 chr20 61826664 61826843 -10327039 - MER5A DNA MER1_type 0 189 9 569 298 128 13 chr20 61827081 61827316 -10326566 + MIR SINE MIR 1 262 0 187 152 0 0 chr20 61828621 61828654 -10325228 + MER5A DNA MER1_type 59 91 -98 426 249 32 37 chr20 61828948 61829165 -10324717 + L2 LINE L2 2854 3069 -244 656 147 203 28 chr20 61829861 61830004 -10323878 + MER5A DNA MER1_type 16 183 -6 238 278 0 0 chr20 61830010 61830064 -10323818 + MER5A DNA MER1_type 130 183 -6 503 223 185 0 chr20 61830073 61830203 -10323679 - MER5A DNA MER1_type -6 183 30 338 100 8 269 chr20 61830224 61830354 -10323528 - MER5B DNA MER1_type -80 98 3 304 231 159 36 chr20 61830788 61830918 -10322964 - MER5A DNA MER1_type -8 181 28 2069 80 39 3 chr20 61831240 61831526 -10322356 + AluSx SINE Alu 1 296 -16 462 257 230 21 chr20 61832016 61832360 -10321522 - L1MD2 LINE L1 -263 5907 5526 1514 178 21 7 chr20 61832378 61832665 -10321217 + AluJb SINE Alu 10 300 -12 1375 240 40 69 chr20 61832855 61832933 -10320949 - Charlie7 DNA MER1_type -297 2315 2236 2060 116 7 7 chr20 61832933 61833234 -10320648 - AluSq SINE Alu -12 301 1 1375 240 40 69 chr20 61833234 61833287 -10320595 - Charlie7 DNA MER1_type -376 2236 2183 387 0 0 0 chr20 61833287 61833330 -10320552 + (CA)n Simple_repeat Simple_repeat 2 44 0 1375 240 40 69 chr20 61833330 61833565 -10320317 - Charlie7 DNA MER1_type -429 2183 1943 2252 62 3 59 chr20 61833565 61833887 -10319995 - AluY SINE Alu -7 304 1 1375 240 40 69 chr20 61833887 61833923 -10319959 - Charlie7 DNA MER1_type -669 1943 1907 2158 115 3 6 chr20 61833923 61834236 -10319646 + AluSx SINE Alu 1 312 0 1375 240 40 69 chr20 61834236 61834422 -10319460 - Charlie7 DNA MER1_type -705 1907 1741 2292 70 6 32 chr20 61835623 61835938 -10317944 - AluSp SINE Alu -4 309 3 652 220 44 6 chr20 61835974 61836156 -10317726 - Charlie7 DNA MER1_type -934 1678 1490 488 273 119 87 chr20 61836164 61836225 -10317657 + MIR SINE MIR 2 60 -202 2191 106 3 3 chr20 61836225 61836537 -10317345 + AluSx SINE Alu 1 312 0 488 273 119 87 chr20 61836537 61836728 -10317154 + MIR SINE MIR 60 262 0 250 342 42 0 chr20 61836777 61836897 -10316985 - Charlie7 DNA MER1_type -2262 350 226 1996 126 0 7 chr20 61837040 61837342 -10316540 - AluJb SINE Alu -12 300 1 2169 78 0 0 chr20 61837478 61837789 -10316093 + AluY SINE Alu 1 311 0 1876 120 0 36 chr20 61837845 61838154 -10315728 - AluSx SINE Alu -4 308 11 332 320 186 19 chr20 61838154 61838519 -10315363 - L2 LINE L2 0 3313 2888 342 316 58 26 chr20 61838526 61838681 -10315201 + L1MC4a LINE L1 5336 5495 -2313 184 179 30 104 chr20 61838711 61838777 -10315105 + MER5B DNA MER1_type 3 63 -115 268 210 16 16 chr20 61838777 61838839 -10315043 - MER5A DNA MER1_type 0 189 128 297 239 30 0 chr20 61838846 61838913 -10314969 - MER5A DNA MER1_type 0 189 121 720 297 74 64 chr20 61838913 61839341 -10314541 + L1MC4a LINE L1 5374 5811 -310 2149 76 23 26 chr20 61839341 61839645 -10314237 + AluY SINE Alu 1 303 -8 720 297 74 64 chr20 61839645 61839825 -10314057 + L1MC4a LINE L1 5811 5988 -133 1925 152 0 0 chr20 61839838 61840140 -10313742 - AluJb SINE Alu -10 302 1 189 0 0 0 chr20 61840209 61840230 -10313652 + (TC)n Simple_repeat Simple_repeat 2 22 0 2070 115 3 0 chr20 61840258 61840554 -10313328 - AluSp SINE Alu -11 302 6 2308 81 0 0 chr20 61840563 61840861 -10313021 - AluSx SINE Alu -14 298 1 262 223 86 36 chr20 61840940 61841079 -10312803 + L1MC4a LINE L1 5768 5913 -1895 183 239 0 0 chr20 61841086 61841132 -10312750 + (TA)n Simple_repeat Simple_repeat 2 47 0 2007 99 0 14 chr20 61841213 61841495 -10312387 + AluSc SINE Alu 1 278 -31 231 36 0 0 chr20 61841495 61841523 -10312359 + (CA)n Simple_repeat Simple_repeat 1 28 0 199 179 51 0 chr20 61841596 61841635 -10312247 + MER5A DNA MER1_type 121 161 -28 189 252 75 84 chr20 61841619 61841726 -10312156 - MER5B DNA MER1_type -72 106 1 * 182 94 0 203 chr20 61841726 61841762 -10312120 + MER5B DNA MER1_type 118 140 -38 2076 132 0 0 chr20 61841762 61842072 -10311810 + AluSx SINE Alu 1 310 -2 182 94 0 203 chr20 61842072 61842087 -10311795 + MER5B DNA MER1_type 140 156 -22 1497 187 0 37 chr20 61842222 61842521 -10311361 - AluJb SINE Alu -22 290 3 231 318 170 51 chr20 61843032 61843286 -10310596 - L2 LINE L2 0 3272 2973 1554 190 3 16 chr20 61843286 61843602 -10310280 + AluJo SINE Alu 1 312 0 231 318 170 51 chr20 61843602 61843658 -10310224 - L2 LINE L2 -299 2973 2925 1960 108 10 26 chr20 61843660 61843959 -10309923 + AluSx SINE Alu 1 303 -9 294 29 0 0 chr20 61843959 61843994 -10309888 + (TA)n Simple_repeat Simple_repeat 1 35 0 263 71 24 0 chr20 61843993 61844035 -10309847 + (CA)n Simple_repeat Simple_repeat 2 44 0 * 1960 108 10 26 chr20 61843994 61844041 -10309841 + AluSx SINE Alu 302 301 -11 708 109 10 0 chr20 61844041 61844142 -10309740 + AluSc SINE Alu 132 233 -76 191 61 30 0 chr20 61844156 61844189 -10309693 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 1967 166 21 6 chr20 61844373 61844705 -10309177 + MLT1A1 LTR MaLR 11 347 -18 15111 119 15 23 chr20 61844889 61845093 -10308789 + Tigger1 DNA MER2_type 27 231 -2187 2281 100 0 0 chr20 61845093 61845402 -10308480 - AluSx SINE Alu -3 309 1 15111 119 15 23 chr20 61845402 61846665 -10307217 + Tigger1 DNA MER2_type 231 1502 -916 2350 45 7 0 chr20 61846665 61846952 -10306930 + AluY SINE Alu 16 304 -7 15111 119 15 23 chr20 61846952 61847421 -10306461 + Tigger1 DNA MER2_type 1502 1946 -472 1780 103 16 77 chr20 61847421 61847731 -10306151 - AluSx SINE Alu -20 292 2 15111 119 15 23 chr20 61847731 61848099 -10305783 + Tigger1 DNA MER2_type 1946 2315 -103 1804 92 0 4 chr20 61848317 61848566 -10305316 - AluY SINE Alu -34 277 30 230 269 142 71 chr20 61848686 61848883 -10304999 + HAL1 LINE L1 2292 2502 -5 1768 132 43 23 chr20 61849026 61849329 -10304553 - AluJb SINE Alu -3 309 1 738 269 27 51 chr20 61850257 61850307 -10303575 - MIR SINE MIR -11 251 201 1860 114 9 60 chr20 61850307 61850623 -10303259 - AluSx SINE Alu -12 300 1 738 269 27 51 chr20 61850623 61850829 -10303053 - MIR SINE MIR -61 201 1 21 0 0 0 chr20 61851334 61851355 -10302527 + AT_rich Low_complexity Low_complexity 1 21 0 2233 86 7 0 chr20 61851384 61851675 -10302207 - AluSc SINE Alu -16 293 1 2153 131 46 25 chr20 61851753 61852120 -10301762 + THE1C LTR MaLR 1 375 0 823 120 17 0 chr20 61852590 61852707 -10301175 + FLAM_C SINE Alu 9 127 -16 249 200 0 0 chr20 61852726 61852771 -10301111 - MLT1I LTR MaLR -265 144 100 270 218 0 36 chr20 61853194 61853249 -10300633 - MER94 DNA DNA -81 53 1 2006 112 0 29 chr20 61853331 61853506 -10300376 - AluSx SINE Alu -7 305 141 1594 54 0 92 chr20 61853506 61853746 -10300136 - AluY SINE Alu -11 300 83 2006 112 0 29 chr20 61853746 61853884 -10299998 - AluSx SINE Alu -171 141 1 247 226 0 60 chr20 61854207 61854291 -10299591 + L2 LINE L2 3136 3214 -58 769 279 98 67 chr20 61854367 61854637 -10299245 + L2 LINE L2 2872 3161 -152 1741 171 7 0 chr20 61854637 61854935 -10298947 - AluJo SINE Alu -8 304 5 769 279 98 67 chr20 61854935 61855084 -10298798 + L2 LINE L2 3161 3304 -9 2068 107 30 0 chr20 61855219 61855518 -10298364 + AluY SINE Alu 1 308 -3 549 157 13 33 chr20 61855539 61855692 -10298190 + GA-rich Low_complexity Low_complexity 3 152 0 11836 168 17 8 chr20 61855708 61858078 -10295804 + L1M1 LINE L1 3460 5855 -1710 2011 130 17 0 chr20 61858179 61858478 -10295404 + AluJb SINE Alu 3 306 -6 342 183 285 15 chr20 61858537 61858674 -10295208 + MER69A DNA AcHobo 4 177 0 1252 210 20 81 chr20 61859219 61859279 -10294603 + MER58B DNA MER1_type 32 94 -2326 1856 161 0 3 chr20 61859279 61859589 -10294293 - AluSx SINE Alu -3 309 1 1252 210 20 81 chr20 61859589 61859851 -10294031 + MER58B DNA MER1_type 94 341 0 1837 138 0 30 chr20 61859910 61860214 -10293668 - AluJb SINE Alu -17 295 1 2222 110 7 0 chr20 61860242 61860552 -10293330 + AluSx SINE Alu 1 312 0 207 0 0 0 chr20 61860564 61860587 -10293295 + (CAA)n Simple_repeat Simple_repeat 2 24 0 379 200 14 0 chr20 61860597 61860667 -10293215 + Charlie2 DNA MER1_type 80 150 -2712 1114 227 130 55 chr20 61860750 61861200 -10292682 + Charlie2 DNA MER1_type 1856 2364 -498 2120 107 7 0 chr20 61861200 61861490 -10292392 - AluSx SINE Alu -20 292 1 1114 227 130 55 chr20 61861490 61861639 -10292243 + Charlie2 DNA MER1_type 2364 2500 -362 302 292 53 96 chr20 61861913 61862214 -10291668 + HAL1b LINE L1 585 872 -476 1413 187 48 0 chr20 61862319 61862440 -10291442 + AluJb SINE Alu 1 115 -197 378 0 0 0 chr20 61862440 61862482 -10291400 + (TAAA)n Simple_repeat Simple_repeat 2 43 0 1413 187 48 0 chr20 61862482 61862649 -10291233 + AluJb SINE Alu 115 303 -9 501 296 47 99 chr20 61862716 61863222 -10290660 + L1M4 LINE L1 2148 2627 -3519 5041 116 49 0 chr20 61863322 61864096 -10289786 + L1PA16 LINE L1 5354 6165 -1 5858 122 17 17 chr20 61864217 61865106 -10288776 + Tigger1 DNA MER2_type 1 889 -1529 1868 148 30 0 chr20 61865382 61865680 -10288202 + AluSx SINE Alu 1 307 -5 1911 103 3 56 chr20 61866054 61866374 -10287508 - AluY SINE Alu -8 303 1 2393 72 0 0 chr20 61866381 61866686 -10287196 - AluY SINE Alu -5 306 2 1005 165 0 0 chr20 61866905 61867092 -10286790 - AluJb SINE Alu 0 312 134 2064 114 10 0 chr20 61867092 61867391 -10286491 - AluSq SINE Alu -11 302 1 835 125 15 0 chr20 61867395 61867531 -10286351 - L1MB5 LINE L1 0 6174 6037 2155 124 0 6 chr20 61867959 61868274 -10285608 + AluSq SINE Alu 1 313 0 301 269 24 48 chr20 61868281 61868448 -10285434 + HAL1 LINE L1 2259 2421 -86 1560 73 0 32 chr20 61868542 61868761 -10285121 + AluSg SINE Alu 1 212 -98 1014 77 0 21 chr20 61868778 61868921 -10284961 + AluSc SINE Alu 170 309 0 602 219 20 55 chr20 61868986 61869132 -10284750 + MER5B DNA MER1_type 35 175 -3 205 257 50 86 chr20 61869007 61869147 -10284735 - MER5A DNA MER1_type -50 139 5 * 878 190 125 5 chr20 61869405 61869589 -10284293 - AluJb SINE Alu -22 290 85 21 0 0 0 chr20 61869597 61869618 -10284264 + AT_rich Low_complexity Low_complexity 1 21 0 999 276 74 34 chr20 61869752 61869894 -10283988 - MLT1L LTR MaLR -7 608 473 2188 100 0 0 chr20 61869894 61870195 -10283687 - AluSx SINE Alu -7 305 5 999 276 74 34 chr20 61870195 61870498 -10283384 - MLT1L LTR MaLR -142 473 145 288 0 0 0 chr20 61870508 61870540 -10283342 + (TG)n Simple_repeat Simple_repeat 2 33 0 25 51 0 0 chr20 61870685 61870724 -10283158 + AT_rich Low_complexity Low_complexity 1 39 0 2114 113 0 0 chr20 61870790 61871090 -10282792 + AluSx SINE Alu 1 300 -12 402 305 60 39 chr20 61871096 61871417 -10282465 + L1MC/D LINE L1 4883 5240 -906 903 260 146 41 chr20 61871427 61871865 -10282017 + L1MC/D LINE L1 5255 5738 -2070 2031 111 10 14 chr20 61871868 61872165 -10281717 + AluSx SINE Alu 3 298 -14 1907 85 96 0 chr20 61872386 61872667 -10281215 - AluSx SINE Alu -4 308 1 457 273 16 16 chr20 61873415 61873536 -10280346 - MIR SINE MIR -66 196 76 2254 100 3 0 chr20 61873596 61873905 -10279977 - AluSx SINE Alu -2 310 1 1435 182 32 8 chr20 61873969 61874216 -10279666 + AluJo SINE Alu 4 256 -56 819 97 0 8 chr20 61874289 61874413 -10279469 + L1 LINE L1 4423 4545 -1601 279 297 11 22 chr20 61874477 61874568 -10279314 - L1MC/D LINE L1 -2145 5663 5574 321 262 12 0 chr20 61874571 61874655 -10279227 + L1MC/D LINE L1 5744 5828 -1980 335 65 0 0 chr20 61874656 61874702 -10279180 - MADE1 DNA Mariner -34 46 1 209 192 231 26 chr20 61874982 61875060 -10278822 - MIR3 SINE MIR -5 203 110 2347 106 0 3 chr20 61875314 61875625 -10278257 - AluSg SINE Alu 0 310 1 1914 88 66 15 chr20 61875823 61876095 -10277787 + AluSq SINE Alu 10 295 -18 2423 63 3 20 chr20 61876211 61876513 -10277369 - AluY SINE Alu -14 297 1 822 181 0 0 chr20 61876670 61876803 -10277079 + FLAM_A SINE Alu 1 133 0 2428 94 0 3 chr20 61876841 61877150 -10276732 - AluSc SINE Alu -1 308 1 2057 131 3 0 chr20 61877170 61877460 -10276422 - AluSx SINE Alu -21 291 1 397 344 37 5 chr20 61877604 61877819 -10276063 + L2 LINE L2 2867 3088 -184 2257 112 7 0 chr20 61877941 61878245 -10275637 - AluSq SINE Alu -7 306 1 2175 119 14 0 chr20 61878254 61878548 -10275334 - AluSx SINE Alu -14 298 1 3277 110 26 0 chr20 61878549 61879004 -10274878 + MER57-int LTR ERV1 5744 6210 -1327 2336 106 0 6 chr20 61879005 61879317 -10274565 - AluSx SINE Alu -2 310 1 1025 160 6 11 chr20 61879529 61879710 -10274172 + L1MA4A LINE L1 6004 6183 -120 2269 101 0 3 chr20 61879749 61880045 -10273837 - AluSg SINE Alu -15 295 1 676 172 15 30 chr20 61880189 61880323 -10273559 - FLAM_A SINE Alu 0 133 2 2325 108 0 0 chr20 61880428 61880725 -10273157 - AluSg SINE Alu -13 297 1 2217 112 0 0 chr20 61880853 61881148 -10272734 - AluSx SINE Alu -17 295 1 2224 117 0 7 chr20 61881160 61881459 -10272423 - AluSx SINE Alu -15 297 1 211 234 0 16 chr20 61881555 61881619 -10272263 + T-rich Low_complexity Low_complexity 1 63 0 432 332 26 12 chr20 61881952 61882252 -10271630 + L1MC4a LINE L1 5671 5825 -534 246 272 0 33 chr20 61883331 61883423 -10270459 - L1MC5 LINE L1 -36 7925 7837 2136 99 28 0 chr20 61884515 61884819 -10269063 - AluSg SINE Alu 0 310 1 240 257 146 42 chr20 61884946 61885090 -10268792 + L1ME4a LINE L1 5961 6119 -2 551 91 69 11 chr20 61885262 61885631 -10268251 + (TA)n Simple_repeat Simple_repeat 1 390 0 202 171 0 0 chr20 61886296 61886337 -10267545 - MIR SINE MIR -74 188 148 2297 120 0 0 chr20 61886705 61887013 -10266869 - AluSq SINE Alu -4 309 2 224 370 14 14 chr20 61887443 61887581 -10266301 + L2 LINE L2 3153 3290 -23 2256 109 7 0 chr20 61887611 61887913 -10265969 - AluSx SINE Alu -8 304 1 2241 113 3 0 chr20 61888522 61888823 -10265059 + AluSq SINE Alu 1 302 -11 2311 71 40 3 chr20 61888901 61889197 -10264685 + AluY SINE Alu 2 308 -3 2072 129 14 0 chr20 61889330 61889616 -10264266 + AluSx SINE Alu 1 290 -22 2157 115 3 3 chr20 61889641 61889937 -10263945 + AluSx SINE Alu 1 296 -16 191 268 36 0 chr20 61890665 61890721 -10263161 + MIR SINE MIR 73 130 -132 250 263 40 30 chr20 61890814 61890913 -10262969 + L2 LINE L2 3209 3308 -5 261 0 0 0 chr20 61890965 61890994 -10262888 + (T)n Simple_repeat Simple_repeat 1 29 0 2652 23 7 3 chr20 61891011 61891313 -10262569 - AluY SINE Alu -8 303 1 2109 79 3 41 chr20 61891313 61891603 -10262279 - AluSp SINE Alu -34 279 1 526 299 19 19 chr20 61891631 61891845 -10262037 - L1ME LINE L1 -521 5649 5436 374 291 149 0 chr20 61892092 61892233 -10261649 + L2 LINE L2 3110 3271 -1 493 73 0 104 chr20 61892376 61892472 -10261410 - AluY SINE Alu 0 312 227 1248 100 0 6 chr20 61892472 61892632 -10261250 - AluY SINE Alu -151 160 2 1869 143 0 49 chr20 61892635 61892942 -10260940 - AluJb SINE Alu -20 292 1 184 269 19 0 chr20 61892960 61893012 -10260870 - L2 LINE L2 -4 3309 3257 2263 85 16 31 chr20 61893144 61893462 -10260420 + AluSp SINE Alu 1 313 0 256 289 12 0 chr20 61893510 61893593 -10260289 - MIR SINE MIR -9 253 170 2261 126 0 0 chr20 61894293 61894602 -10259280 - AluSx SINE Alu -3 309 1 233 130 87 0 chr20 61894677 61894723 -10259159 + L2 LINE L2 3258 3307 -6 2242 120 0 0 chr20 61894884 61895185 -10258697 - AluSg SINE Alu -9 301 1 26 50 0 0 chr20 61895303 61895343 -10258539 + AT_rich Low_complexity Low_complexity 1 40 0 854 294 57 55 chr20 61895744 61896257 -10257625 + L1MC4a LINE L1 5302 5815 -1993 2039 95 74 7 chr20 61896269 61896554 -10257328 + AluSx SINE Alu 1 304 -8 1905 172 3 0 chr20 61896567 61896870 -10257012 + AluJb SINE Alu 1 304 -8 479 256 40 74 chr20 61896884 61897060 -10256822 - MIR SINE MIR -32 230 61 248 233 0 27 chr20 61897062 61897135 -10256747 + L1MC4a LINE L1 5870 5940 -1868 2541 61 0 3 chr20 61897137 61897434 -10256448 + AluSc SINE Alu 1 296 -13 1715 161 0 74 chr20 61897449 61897785 -10256097 + AluJo SINE Alu 1 311 -1 228 179 0 18 chr20 61897785 61897841 -10256041 + (TA)n Simple_repeat Simple_repeat 2 56 0 255 245 0 51 chr20 61897841 61897939 -10255943 - L1MC4 LINE L1 -1337 6705 6613 25 31 0 0 chr20 61898177 61898209 -10255673 + AT_rich Low_complexity Low_complexity 1 32 0 244 182 182 0 chr20 61898290 61898356 -10255526 + MER33 DNA MER1_type 6 83 -241 1923 144 0 26 chr20 61898372 61898677 -10255205 + AluJb SINE Alu 9 305 -7 346 164 0 0 chr20 61898684 61898739 -10255143 + MER33 DNA MER1_type 73 127 -197 1144 80 130 6 chr20 61898749 61898911 -10254971 + AluSq SINE Alu 1 182 -131 1480 83 10 0 chr20 61898917 61899110 -10254772 + AluSp SINE Alu 117 311 -2 2144 133 0 3 chr20 61899124 61899424 -10254458 - AluSq SINE Alu -14 299 1 539 177 31 23 chr20 61899428 61899558 -10254324 + MER33 DNA MER1_type 147 277 -47 1130 120 15 131 chr20 61899558 61899646 -10254236 + L1MA4 LINE L1 5712 5809 -491 2225 135 0 0 chr20 61899646 61899958 -10253924 + AluSx SINE Alu 1 312 0 1130 120 15 131 chr20 61899958 61900128 -10253754 + L1MA4 LINE L1 5809 5940 -360 750 86 0 38 chr20 61900139 61900244 -10253638 - AluS SINE Alu -210 102 2 1822 156 3 7 chr20 61900525 61900813 -10253069 + AluJb SINE Alu 1 287 -25 408 20 0 0 chr20 61900813 61900862 -10253020 + (CCAA)n Simple_repeat Simple_repeat 2 50 0 336 284 22 89 chr20 61900992 61901199 -10252683 - MIR SINE MIR -3 259 67 2555 60 0 0 chr20 61901199 61901497 -10252385 - AluY SINE Alu -13 298 1 336 284 22 89 chr20 61901497 61901514 -10252368 - MIR SINE MIR -195 67 50 1144 245 69 79 chr20 61901559 61901799 -10252083 + MLT1D LTR MaLR 5 246 -259 3702 95 16 88 chr20 61901799 61902223 -10251659 + MER61E LTR ERV1 1 369 -200 2123 112 14 20 chr20 61902223 61902519 -10251363 + AluSp SINE Alu 1 294 -19 3702 95 16 88 chr20 61902519 61902707 -10251175 + MER61E LTR ERV1 369 569 0 1607 147 11 19 chr20 61902707 61902973 -10250909 + AluJb SINE Alu 49 312 0 1144 245 69 79 chr20 61902973 61902988 -10250894 + MLT1D LTR MaLR 245 259 -246 390 21 0 0 chr20 61902988 61903035 -10250847 + (CA)n Simple_repeat Simple_repeat 2 48 0 1144 245 69 79 chr20 61903035 61903283 -10250599 + MLT1D LTR MaLR 259 505 0 1061 146 75 61 chr20 61903422 61903634 -10250248 + MER20 DNA MER1_type 5 219 0 954 144 0 69 chr20 61903641 61903795 -10250087 + MER2 DNA MER2_type 1 143 -202 2230 117 0 0 chr20 61903795 61904093 -10249789 - AluSx SINE Alu -14 298 1 954 144 0 69 chr20 61904093 61904111 -10249771 + MER2 DNA MER2_type 143 161 -184 3227 127 62 2 chr20 61904113 61904584 -10249298 + MER1A DNA MER1_type 31 529 0 349 204 136 120 chr20 61904584 61904603 -10249279 + MER2 DNA MER2_type 152 169 -176 1796 136 0 8 chr20 61904603 61904861 -10249021 + AluSx SINE Alu 47 302 -10 349 204 136 120 chr20 61904861 61905032 -10248850 + MER2 DNA MER2_type 169 345 0 635 170 0 0 chr20 61905081 61905215 -10248667 + FLAM_C SINE Alu 18 151 0 500 257 0 43 chr20 61905218 61905358 -10248524 - MIR SINE MIR -71 191 58 1231 189 103 46 chr20 61905370 61905651 -10248231 - AluJo SINE Alu -5 297 1 2365 83 0 3 chr20 61905655 61905955 -10247927 - AluSc SINE Alu -10 299 1 1112 217 14 25 chr20 61905996 61906277 -10247605 - Charlie1b DNA MER1_type -198 325 48 400 248 51 60 chr20 61906375 61906609 -10247273 + MER113 DNA MER1_type? 1 232 -289 1289 182 13 13 chr20 61906615 61906846 -10247036 + AluJo SINE Alu 1 231 -81 689 202 84 6 chr20 61906862 61907040 -10246842 + MER113 DNA MER1_type? 203 394 -127 2495 68 0 0 chr20 61907065 61907359 -10246523 - AluY SINE Alu -17 294 1 27 29 0 0 chr20 61907359 61907393 -10246489 + AT_rich Low_complexity Low_complexity 1 34 0 1307 136 11 0 chr20 61907409 61907600 -10246282 - AluJb SINE Alu -119 193 1 237 240 13 40 chr20 61907608 61907683 -10246199 + MER113 DNA MER1_type? 439 511 -10 2396 82 7 3 chr20 61908106 61908411 -10245471 - AluSg SINE Alu -4 306 1 22 0 0 0 chr20 61908513 61908535 -10245347 + AT_rich Low_complexity Low_complexity 1 22 0 748 257 175 22 chr20 61909139 61909242 -10244640 - MLT1J LTR MaLR -42 469 383 2358 63 3 10 chr20 61909242 61909541 -10244341 - AluY SINE Alu -14 297 1 748 257 175 22 chr20 61909541 61909838 -10244044 - MLT1J LTR MaLR -128 383 8 2637 48 0 3 chr20 61909853 61910162 -10243720 + AluY SINE Alu 1 308 -3 2348 99 0 10 chr20 61910164 61910478 -10243404 + AluSx SINE Alu 1 311 -1 1756 188 0 7 chr20 61910487 61910796 -10243086 - AluJb SINE Alu -5 307 1 2155 116 7 0 chr20 61910912 61911205 -10242677 - AluSx SINE Alu -17 295 1 571 197 44 15 chr20 61911205 61911342 -10242540 - L2 LINE L2 -12 3301 3161 1716 163 25 31 chr20 61911358 61911684 -10242198 + MLT1A1 LTR MaLR 1 324 -41 757 212 7 14 chr20 61911697 61911843 -10242039 + AluJb SINE Alu 149 293 -19 312 180 0 0 chr20 61911843 61911893 -10241989 + MLT1A1 LTR MaLR 316 365 0 452 280 44 56 chr20 61911894 61911943 -10241939 - L2 LINE L2 -112 3201 3153 2301 109 30 0 chr20 61911943 61912246 -10241636 - AluSx SINE Alu 0 312 1 452 280 44 56 chr20 61912246 61912667 -10241215 - L2 LINE L2 -160 3153 2733 2301 122 0 0 chr20 61912848 61913152 -10240730 - AluSx SINE Alu -6 306 3 674 248 126 0 chr20 61913234 61913456 -10240426 - MIR SINE MIR -11 251 2 2241 117 7 0 chr20 61913609 61913908 -10239974 - AluSx SINE Alu -11 301 1 450 266 194 18 chr20 61914138 61914360 -10239522 + MIR SINE MIR 1 261 -1 1592 166 70 15 chr20 61914963 61915234 -10238648 - AluJb SINE Alu -26 286 1 2353 106 3 0 chr20 61915446 61915757 -10238125 + AluSp SINE Alu 1 312 -1 238 272 12 0 chr20 61915771 61915852 -10238030 - L1ME LINE L1 -269 5852 5771 180 296 40 75 chr20 61915984 61916183 -10237699 - L2 LINE L2 -4 3309 3118 702 259 38 38 chr20 61916444 61916680 -10237202 + MIR SINE MIR 6 241 -21 858 186 41 64 chr20 61916717 61916937 -10236945 - MER20 DNA MER1_type -4 215 1 1657 189 7 17 chr20 61916969 61917266 -10236616 + AluJb SINE Alu 1 294 -18 1777 120 7 33 chr20 61917311 61917585 -10236297 + AluSx SINE Alu 25 291 -21 29 47 0 0 chr20 61917605 61917648 -10236234 + AT_rich Low_complexity Low_complexity 1 43 0 2209 106 3 0 chr20 61917738 61918022 -10235860 - AluSg SINE Alu -25 285 1 1025 129 0 13 chr20 61918055 61918210 -10235672 + AluJb SINE Alu 159 311 -1 2296 108 0 0 chr20 61918238 61918533 -10235349 - AluSg SINE Alu -15 295 1 1434 173 16 0 chr20 61918535 61918778 -10235104 + Tigger3(Golem) DNA MER2_type 2753 2999 -30 252 164 0 0 chr20 61919015 61919082 -10234800 + (TG)n Simple_repeat Simple_repeat 2 68 0 234 152 0 0 chr20 61919100 61919133 -10234749 - Tigger3(Golem) DNA MER2_type -2996 33 1 621 274 56 0 chr20 61919654 61919851 -10234031 - MIR SINE MIR -34 228 21 2583 118 33 18 chr20 61919911 61920374 -10233508 - MER1A DNA MER1_type 0 529 1 674 222 68 23 chr20 61920379 61920555 -10233327 + MER20 DNA MER1_type 36 219 0 452 90 0 0 chr20 61920848 61920915 -10232967 - AluJo SINE Alu -6 306 240 2212 120 67 0 chr20 61920918 61921259 -10232623 - THE1B LTR MaLR 0 364 1 1773 137 0 4 chr20 61921259 61921500 -10232382 - AluJo SINE Alu -72 240 1 738 288 40 51 chr20 61921551 61921704 -10232178 + L2 LINE L2 2935 3088 -225 2288 85 0 20 chr20 61921704 61921998 -10231884 - AluSc SINE Alu -21 288 1 738 288 40 51 chr20 61921998 61922215 -10231667 + L2 LINE L2 3088 3301 -12 1505 117 195 8 chr20 61922218 61922474 -10231408 + AluSg1 SINE Alu 1 304 -5 1864 138 38 0 chr20 61922614 61922905 -10230977 - AluJb SINE Alu -10 302 1 313 268 71 0 chr20 61922981 61923093 -10230789 - L1ME LINE L1 -402 5719 5600 196 195 0 0 chr20 61923191 61923232 -10230650 - MIR SINE MIR -44 218 178 2166 118 23 0 chr20 61923308 61923613 -10230269 - AluSq SINE Alu -1 312 1 607 296 14 33 chr20 61923613 61923826 -10230056 - MIR SINE MIR -48 214 6 326 250 12 0 chr20 61923833 61923913 -10229969 - MIR SINE MIR -91 171 91 264 202 36 48 chr20 61923916 61924000 -10229882 - L1ME LINE L1 -2320 5488 5406 2530 31 0 3 chr20 61924099 61924443 -10229439 + AluY SINE Alu 1 343 0 2271 75 3 30 chr20 61924545 61924840 -10229042 + AluSp SINE Alu 11 297 -16 872 191 6 29 chr20 61924866 61925039 -10228843 - AluJo SINE Alu -142 170 2 2131 60 0 15 chr20 61925044 61925309 -10228573 - AluY SINE Alu -11 300 40 1159 169 72 8 chr20 61925426 61925675 -10228207 + L1MD3 LINE L1 7730 7994 -1 277 119 0 45 chr20 61926100 61926167 -10227715 + (TTA)n Simple_repeat Simple_repeat 2 65 0 468 273 0 17 chr20 61928367 61928543 -10225339 - MER104 DNA MER2_type -3 177 5 1597 171 3 10 chr20 61929119 61929417 -10224465 + AluJo SINE Alu 1 296 -16 243 257 276 26 chr20 61929469 61929621 -10224261 + MIR SINE MIR 45 234 -28 2018 123 0 3 chr20 61929899 61930208 -10223674 - AluSx SINE Alu 0 308 1 424 122 244 11 chr20 61930590 61930680 -10223202 + MER96B DNA MER1_type? 1 111 -306 358 211 221 0 chr20 61930680 61930784 -10223098 + MIR SINE MIR 64 190 -72 976 168 89 11 chr20 61930784 61930974 -10222908 - MER46A DNA MER2_type -1 235 31 252 167 0 19 chr20 61931016 61931070 -10222812 + MER96B DNA MER1_type? 130 182 -235 2276 52 3 10 chr20 61931238 61931565 -10222317 + AluY SINE Alu 1 325 0 2031 114 3 0 chr20 61931572 61931861 -10222021 + AluSx SINE Alu 1 290 -22 2142 123 3 0 chr20 61931864 61932166 -10221716 + AluSx SINE Alu 1 303 -9 610 277 79 17 chr20 61932185 61932362 -10221520 + MIR SINE MIR 21 208 -54 1904 150 7 0 chr20 61932524 61932817 -10221065 + AluJo SINE Alu 1 295 -17 1102 144 6 0 chr20 61932929 61933096 -10220786 - AluJb SINE Alu -144 168 1 248 190 25 51 chr20 61933149 61933228 -10220654 - L1MC5 LINE L1 -49 7912 7836 1150 138 31 5 chr20 61933291 61933487 -10220395 + L1MA5A LINE L1 6078 6278 -19 2383 78 0 7 chr20 61933548 61933856 -10220026 + AluSq SINE Alu 1 306 -7 326 284 105 74 chr20 61933858 61934087 -10219795 - L1MC5 LINE L1 -197 7764 7529 186 43 0 0 chr20 61934777 61934800 -10219082 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 288 269 46 28 chr20 61936023 61936131 -10217751 - MIR SINE MIR -5 257 148 208 306 8 57 chr20 61936157 61936281 -10217601 - L2 LINE L2 -75 3238 3121 230 260 134 0 chr20 61936318 61936412 -10217470 - MIR SINE MIR -47 161 55 898 281 165 15 chr20 61936590 61937111 -10216771 - L2 LINE L2 -1 3312 2712 1572 146 6 77 chr20 61937318 61937339 -10216543 - AluJb SINE Alu 0 312 291 2249 59 38 3 chr20 61937339 61937627 -10216255 + AluY SINE Alu 1 298 -13 1572 146 6 77 chr20 61937627 61937806 -10216076 - AluJb SINE Alu -21 291 143 2031 119 0 0 chr20 61937806 61938092 -10215790 + AluSx SINE Alu 3 288 -24 1572 146 6 77 chr20 61938092 61938226 -10215656 - AluJb SINE Alu -169 143 1 342 0 0 0 chr20 61939294 61939332 -10214550 + (CA)n Simple_repeat Simple_repeat 2 39 0 2110 88 3 3 chr20 61940197 61940526 -10213356 + AluSx SINE Alu 1 329 0 21 36 0 0 chr20 61940884 61940912 -10212970 + AT_rich Low_complexity Low_complexity 1 28 0 343 273 119 28 chr20 61940924 61941067 -10212815 - MIR SINE MIR -20 242 87 2177 105 0 0 chr20 61941088 61941384 -10212498 - AluSx SINE Alu -16 296 1 378 234 37 152 chr20 61941412 61941681 -10212201 + MER102b DNA MER1_type 103 340 -1 1069 190 5 0 chr20 61941709 61941904 -10211978 - L1MC3 LINE L1 -190 7595 7400 775 109 9 0 chr20 61941904 61942014 -10211868 + Alu SINE Alu 191 301 -9 861 141 192 0 chr20 61942014 61942191 -10211691 - L1MC3 LINE L1 -374 7411 7201 2087 158 0 15 chr20 61942742 61943084 -10210798 - MER1B DNA MER1_type 0 337 1 745 191 43 0 chr20 61943111 61943252 -10210630 + MLT1A1 LTR MaLR 4 150 -215 1487 181 0 0 chr20 61943255 61943503 -10210379 + AluJb SINE Alu 2 249 -63 871 256 37 34 chr20 61943520 61943841 -10210041 - L1MD3 LINE L1 0 7995 7674 2170 119 0 0 chr20 61943845 61944155 -10209727 - AluSx SINE Alu -2 310 1 983 166 74 0 chr20 61944211 61944374 -10209508 - FAM SINE Alu 0 175 1 21 36 0 0 chr20 61944394 61944422 -10209460 + AT_rich Low_complexity Low_complexity 1 28 0 290 140 0 0 chr20 61944438 61944488 -10209394 - Alu SINE Alu 0 301 252 368 174 14 29 chr20 61944489 61944558 -10209324 - AluSg/x SINE Alu -113 187 120 2524 27 0 7 chr20 61944789 61945088 -10208794 - AluY SINE Alu -14 297 1 301 291 68 8 chr20 61945090 61945275 -10208607 + L1MC/D LINE L1 5607 5799 -322 195 42 0 0 chr20 61945292 61945316 -10208566 + (A)n Simple_repeat Simple_repeat 1 24 0 2159 104 7 0 chr20 61945317 61945615 -10208267 + AluSx SINE Alu 1 300 -12 825 143 51 120 chr20 61945669 61945833 -10208049 + MER3 DNA MER1_type 2 149 -60 698 200 0 0 chr20 61945833 61945958 -10207924 - FLAM_A SINE Alu -8 125 1 825 143 51 120 chr20 61945958 61946009 -10207873 + MER3 DNA MER1_type 149 202 -7 21 57 0 0 chr20 61946077 61946112 -10207770 + AT_rich Low_complexity Low_complexity 1 35 0 2077 121 0 0 chr20 61946174 61946471 -10207411 - AluSg SINE Alu -13 297 1 2203 103 3 0 chr20 61946764 61947066 -10206816 - AluSp SINE Alu -10 303 1 245 258 81 0 chr20 61947146 61947208 -10206674 + L2 LINE L2 3186 3252 -20 2050 87 33 30 chr20 61947525 61947824 -10206058 - AluSx SINE Alu -12 300 1 223 232 36 0 chr20 61948168 61948224 -10205658 + MER91B DNA MER1_type 31 88 -102 426 278 141 70 chr20 61948483 61948724 -10205158 + MIR SINE MIR 1 258 -4 1598 133 38 63 chr20 61948724 61949041 -10204841 + AluJo SINE Alu 2 310 -2 2137 97 10 0 chr20 61949103 61949401 -10204481 - AluSg SINE Alu -9 301 1 333 0 0 0 chr20 61949734 61949771 -10204111 + (TG)n Simple_repeat Simple_repeat 2 38 0 2075 103 0 17 chr20 61949771 61949924 -10203958 - AluSq SINE Alu -27 286 139 1962 130 7 0 chr20 61949924 61950225 -10203657 - AluSg SINE Alu -7 303 1 2075 103 0 17 chr20 61950225 61950362 -10203520 - AluSq SINE Alu -174 139 1 571 150 30 10 chr20 61950465 61950565 -10203317 + U6 snRNA snRNA 2 103 -4 388 301 82 22 chr20 61950569 61950648 -10203234 - L2 LINE L2 -17 3296 3223 2063 133 0 0 chr20 61950648 61950949 -10202933 - AluSg SINE Alu -9 301 1 388 301 82 22 chr20 61950949 61951052 -10202830 - L2 LINE L2 -90 3223 3103 865 255 205 33 chr20 61951067 61951384 -10202498 + MLT1G LTR MaLR 11 272 -318 2170 93 3 3 chr20 61951384 61951686 -10202196 - AluSx SINE Alu -10 302 1 865 255 205 33 chr20 61951686 61951855 -10202027 + MLT1G LTR MaLR 272 581 -9 1800 152 0 0 chr20 61951872 61952189 -10201693 + AluSx SINE Alu 1 317 0 784 280 138 23 chr20 61952189 61952766 -10201116 - L2 LINE L2 -203 3110 2470 424 236 257 7 chr20 61952795 61952935 -10200947 + MER5A DNA MER1_type 9 183 -6 245 243 14 43 chr20 61952947 61953017 -10200865 - MER5B DNA MER1_type -2 176 109 441 82 16 0 chr20 61953143 61953204 -10200678 + U7 snRNA snRNA 2 63 0 38 0 0 0 chr20 61953211 61953249 -10200633 + AT_rich Low_complexity Low_complexity 1 38 0 2147 92 0 0 chr20 61953251 61953535 -10200347 + AluSx SINE Alu 16 299 -13 717 174 0 0 chr20 61953535 61953650 -10200232 - FLAM_A SINE Alu -18 115 1 1900 110 3 55 chr20 61953702 61954012 -10199870 - AluSx SINE Alu -4 308 15 502 237 93 7 chr20 61954263 61954402 -10199480 + MER117 DNA MER1_type 4 154 -43 2281 59 24 3 chr20 61954524 61954814 -10199068 - AluSq SINE Alu -17 296 1 377 243 100 13 chr20 61955110 61955235 -10198647 + L1MD2 LINE L1 6026 6140 -204 2076 102 42 0 chr20 61955287 61955571 -10198311 + AluSg SINE Alu 2 297 -13 257 253 10 0 chr20 61955753 61955852 -10198030 - MER113 DNA MER1_type? -401 120 21 1758 166 0 19 chr20 61955878 61956192 -10197690 + AluJo SINE Alu 1 308 -4 534 153 0 0 chr20 61956283 61956381 -10197501 + L1MB4 LINE L1 6082 6179 -1 2014 110 0 42 chr20 61956418 61956726 -10197156 + AluSp SINE Alu 3 297 -16 2416 58 3 10 chr20 61956835 61957148 -10196734 + AluY SINE Alu 1 311 0 2035 115 0 3 chr20 61957190 61957486 -10196396 - AluSq SINE Alu -8 305 11 2136 117 0 3 chr20 61957575 61957873 -10196009 - AluSx SINE Alu -15 297 1 1081 213 68 8 chr20 61957990 61958239 -10195643 + L1MD3 LINE L1 7732 7995 0 767 234 58 11 chr20 61959496 61959684 -10194198 + MIR SINE MIR 5 201 -61 186 254 0 0 chr20 61959727 61959794 -10194088 + (TG)n Simple_repeat Simple_repeat 2 68 0 1954 115 4 0 chr20 61960161 61960440 -10193442 + AluSx SINE Alu 1 280 -32 294 29 0 0 chr20 61960440 61960475 -10193407 + (TAAA)n Simple_repeat Simple_repeat 1 35 0 1000 140 12 0 chr20 61960478 61960642 -10193240 + AluSg/x SINE Alu 134 299 -11 1135 246 114 59 chr20 61960647 61961242 -10192640 + L2 LINE L2 2352 3035 -278 2164 101 0 3 chr20 61961242 61961540 -10192342 + AluSx SINE Alu 5 301 -11 1135 246 114 59 chr20 61961540 61961836 -10192046 + L2 LINE L2 3035 3313 0 198 291 18 0 chr20 61961897 61961952 -10191930 + L2 LINE L2 3211 3266 -6 2237 84 10 7 chr20 61962027 61962337 -10191545 + AluSp SINE Alu 2 312 -1 1665 173 3 23 chr20 61962387 61962694 -10191188 + AluJo SINE Alu 11 311 -1 364 193 64 34 chr20 61962707 61962831 -10191051 - MLT1H LTR MaLR -6 618 415 1209 153 22 26 chr20 61963250 61963479 -10190403 - AluJo SINE Alu -2 310 83 225 0 0 0 chr20 61963672 61963697 -10190185 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 1933 114 21 0 chr20 61963752 61964033 -10189849 - AluSx SINE Alu -25 287 1 2461 28 0 0 chr20 61964122 61964455 -10189427 + AluY SINE Alu 1 333 0 741 158 18 0 chr20 61964545 61964659 -10189223 + FLAM_C SINE Alu 2 117 -26 1631 141 19 60 chr20 61964719 61965038 -10188844 + AluJo SINE Alu 2 307 -5 2113 123 3 0 chr20 61965091 61965399 -10188483 - AluSx SINE Alu -3 309 1 2214 102 0 0 chr20 61965428 61965723 -10188159 + AluSp SINE Alu 1 295 -18 250 245 75 57 chr20 61965742 61965848 -10188034 + L1MC4 LINE L1 7628 7735 -307 2142 94 0 3 chr20 61967319 61967606 -10186276 - AluSc SINE Alu -22 287 2 794 251 67 0 chr20 61967816 61968011 -10185871 + MER58A DNA MER1_type 1 208 -16 380 366 46 8 chr20 61968015 61968146 -10185736 + MIR SINE MIR 17 152 -110 722 158 17 188 chr20 61968150 61968265 -10185617 - MIR SINE MIR 0 262 129 2117 80 14 0 chr20 61968265 61968540 -10185342 + AluSx SINE Alu 3 281 -31 1885 118 31 24 chr20 61968540 61968828 -10185054 - AluSg SINE Alu -17 293 3 722 158 17 188 chr20 61968828 61968951 -10184931 - MIR SINE MIR -131 131 64 196 323 0 43 chr20 61968955 61969048 -10184834 + MIR SINE MIR 161 249 -13 616 180 281 0 chr20 61969062 61969201 -10184681 + FAM SINE Alu 1 48 -1 308 193 128 55 chr20 61969639 61969748 -10184134 - L1ME4a LINE L1 -1 6120 6004 2232 70 0 10 chr20 61969750 61970048 -10183834 - AluSc SINE Alu -14 295 1 1986 131 0 16 chr20 61970861 61971195 -10182687 + AluSq SINE Alu 1 313 0 1135 86 6 6 chr20 61971195 61971357 -10182525 + AluSg/x SINE Alu 132 293 -17 743 246 21 21 chr20 61971389 61971580 -10182302 + MIR SINE MIR 31 221 -41 562 196 184 82 chr20 61971586 61971831 -10182051 + MER46C DNA MER2_type 31 300 -38 193 347 41 58 chr20 61971905 61972026 -10181856 - MIR SINE MIR -71 191 73 878 124 6 96 chr20 61972111 61972324 -10181558 + AluJb SINE Alu 120 316 0 1861 88 10 51 chr20 61972328 61972645 -10181237 - AluSx SINE Alu 0 305 1 700 206 161 35 chr20 61972754 61972953 -10180929 - MIR SINE MIR -1 261 38 398 254 119 23 chr20 61973082 61973259 -10180623 + L1ME LINE L1 5625 5818 -303 1610 146 49 17 chr20 61973271 61973558 -10180324 + AluJo SINE Alu 1 296 -16 272 128 0 0 chr20 61973561 61973600 -10180282 + MER66B LTR ERV1 295 333 -153 194 0 39 0 chr20 61973631 61973657 -10180225 + (TAAA)n Simple_repeat Simple_repeat 4 30 0 1370 161 111 43 chr20 61973727 61973864 -10180018 + AluSx SINE Alu 1 127 -175 1859 94 64 0 chr20 61973864 61974173 -10179709 + AluSq SINE Alu 1 326 0 1370 161 111 43 chr20 61974173 61974314 -10179568 + AluSx SINE Alu 127 299 -3 685 140 0 0 chr20 61974328 61974421 -10179461 + AluSg/x SINE Alu 196 288 -24 248 204 0 0 chr20 61974427 61974471 -10179411 + Cheshire DNA MER1_type 850 893 -1527 * 315 138 0 184 chr20 61974469 61974496 -10179386 + MER58 DNA MER1_type 2350 2380 -40 2204 105 0 0 chr20 61974496 61974801 -10179081 - AluSg SINE Alu -5 305 1 315 138 0 184 chr20 61974801 61974860 -10179022 + MER58 DNA MER1_type 2380 2420 0 429 208 32 48 chr20 61974884 61975009 -10178873 - MLT1E2 LTR MaLR -456 170 48 * 1270 198 68 25 chr20 61975002 61975325 -10178557 + MLT1D LTR MaLR 169 505 0 186 103 0 0 chr20 61975446 61975475 -10178407 - L2 LINE L2 0 3313 3285 1913 132 0 25 chr20 61975481 61975799 -10178083 + AluSx SINE Alu 1 310 -2 185 326 131 39 chr20 61975813 61976095 -10177787 - L2 LINE L2 -15 3257 2950 440 190 22 41 chr20 61976197 61976459 -10177423 + GA-rich Low_complexity Low_complexity 1 267 -635 1869 121 6 46 chr20 61976459 61976597 -10177285 + AluSx SINE Alu 1 143 -169 2065 101 26 3 chr20 61976597 61976903 -10176979 + AluSq SINE Alu 1 313 0 1869 121 6 46 chr20 61976903 61977087 -10176795 + AluSx SINE Alu 143 310 -2 440 190 22 41 chr20 61977087 61977118 -10176764 + GA-rich Low_complexity Low_complexity 267 902 0 857 199 52 70 chr20 61977396 61977443 -10176439 + L1MB7 LINE L1 5903 5949 -235 2026 114 0 47 chr20 61977443 61977760 -10176122 - AluJb SINE Alu -10 302 1 857 199 52 70 chr20 61977760 61977999 -10175883 + L1MB7 LINE L1 5949 6184 0 1854 145 0 3 chr20 61978040 61978343 -10175539 - AluJb SINE Alu 0 303 2 315 300 0 0 chr20 61978409 61978489 -10175393 - L2 LINE L2 -2 3311 3232 771 215 0 90 chr20 61978491 61978714 -10175168 - MLT1D LTR MaLR -302 203 1 534 303 34 6 chr20 61978773 61978951 -10174931 - MIR SINE MIR -55 207 25 211 226 57 0 chr20 61979208 61979261 -10174621 - L2 LINE L2 -2 3311 3256 2080 92 41 0 chr20 61980230 61980524 -10173358 + AluSg SINE Alu 1 306 -4 1253 97 6 0 chr20 61980524 61980700 -10173182 + AluSg/x SINE Alu 132 308 -2 2309 64 7 3 chr20 61980704 61980999 -10172883 + AluY SINE Alu 1 296 -15 522 287 51 6 chr20 61981035 61981192 -10172690 + MIR SINE MIR 98 261 -1 1685 140 10 46 chr20 61981698 61982005 -10171877 - AluSx SINE Alu -13 299 4 831 123 8 23 chr20 61983591 61983721 -10170161 - FLAM_C SINE Alu -5 128 1 2178 75 3 30 chr20 61983731 61984036 -10169846 - AluY SINE Alu -14 297 1 677 172 57 8 chr20 61984064 61984186 -10169696 + FLAM_A SINE Alu 1 128 -5 477 200 138 46 chr20 61984366 61984390 -10169492 + L1MD3 LINE L1 7773 7793 -202 2213 94 3 3 chr20 61984390 61984689 -10169193 + AluSg SINE Alu 1 299 -11 477 200 138 46 chr20 61984689 61984859 -10169023 + L1MD3 LINE L1 7793 7985 -10 2019 127 0 0 chr20 61985102 61985394 -10168488 - AluSx SINE Alu -15 297 6 315 191 0 48 chr20 61985414 61985477 -10168405 - Alu SINE Alu -4 298 239 2371 87 0 3 chr20 61985486 61985797 -10168085 - AluSx SINE Alu -2 310 1 2233 103 0 0 chr20 61985802 61986103 -10167779 - AluSg SINE Alu -7 303 3 2153 94 0 13 chr20 61986425 61986732 -10167150 + AluY SINE Alu 1 303 -8 1269 217 90 3 chr20 61986866 61987166 -10166716 - MER58B DNA MER1_type -15 326 1 251 277 23 39 chr20 61987188 61987318 -10166564 - L1ME LINE L1 -352 5810 5683 233 279 139 12 chr20 61987605 61987691 -10166191 - MIR SINE MIR -41 221 125 1695 183 80 74 chr20 61987805 61987908 -10165974 + MLT1D LTR MaLR 1 102 -403 2160 110 0 0 chr20 61987908 61988208 -10165674 - AluSx SINE Alu -12 300 1 1695 183 80 74 chr20 61988208 61988526 -10165356 + MLT1D LTR MaLR 102 417 -88 1903 65 69 31 chr20 61988526 61988816 -10165066 + AluY SINE Alu 1 301 -10 1695 183 80 74 chr20 61988816 61988838 -10165044 + MLT1D LTR MaLR 417 437 -68 2368 52 0 19 chr20 61988838 61989145 -10164737 - AluY SINE Alu -10 301 1 1695 183 80 74 chr20 61989145 61989201 -10164681 + MLT1D LTR MaLR 437 505 0 1678 161 3 26 chr20 61989260 61989570 -10164312 + AluJo SINE Alu 1 303 -9 598 157 74 8 chr20 61989589 61989710 -10164172 - Tigger1 DNA MER2_type -312 2106 1978 2136 85 0 20 chr20 61989713 61990008 -10163874 + AluY SINE Alu 1 289 -22 870 160 0 0 chr20 61990009 61990153 -10163729 - Tigger1 DNA MER2_type -589 1829 1686 732 159 45 8 chr20 61990153 61990285 -10163597 - AluJo SINE Alu -175 137 1 4912 107 33 73 chr20 61990285 61990533 -10163349 - Tigger1 DNA MER2_type -727 1691 1435 4242 88 9 0 chr20 61990533 61991080 -10162802 + MER41A LTR ERV1 3 554 0 4912 107 33 73 chr20 61991080 61991205 -10162677 - Tigger1 DNA MER2_type -983 1435 1307 2269 81 0 3 chr20 61991205 61991503 -10162379 - AluSg SINE Alu -13 297 1 4912 107 33 73 chr20 61991503 61991629 -10162253 - Tigger1 DNA MER2_type -1111 1307 1178 1836 124 55 0 chr20 61991629 61991904 -10161978 + AluSx SINE Alu 3 292 -20 4912 107 33 73 chr20 61991904 61992252 -10161630 - Tigger1 DNA MER2_type -1240 1178 876 1964 132 3 3 chr20 61992252 61992556 -10161326 - AluSp SINE Alu -9 304 1 4912 107 33 73 chr20 61992556 61992585 -10161297 - Tigger1 DNA MER2_type -1542 876 847 1618 109 0 0 chr20 61992586 61992807 -10161075 + AluSp SINE Alu 1 221 -92 1926 129 3 7 chr20 61992828 61993123 -10160759 - AluSx SINE Alu -18 294 1 509 176 20 0 chr20 61993125 61993227 -10160655 - MER7A DNA MER2_type -231 115 14 1035 196 132 0 chr20 61993490 61993725 -10160157 + AluJb SINE Alu 1 266 -46 1794 103 11 15 chr20 61993869 61994130 -10159752 + AluSq SINE Alu 1 260 -53 568 161 0 0 chr20 61994130 61994217 -10159665 + AluJb SINE Alu 211 297 -15 2008 113 17 0 chr20 61994217 61994510 -10159372 + AluSp SINE Alu 1 298 -15 216 0 0 0 chr20 61994872 61994896 -10158986 + (A)n Simple_repeat Simple_repeat 1 24 0 2164 87 3 0 chr20 61996063 61996350 -10157532 + AluSg SINE Alu 2 289 -21 1738 162 46 60 chr20 61997116 61997342 -10156540 - MER47A DNA MER2_type -1958 365 144 2222 99 7 0 chr20 61997342 61997645 -10156237 + AluSx SINE Alu 1 305 -7 1738 162 46 60 chr20 61997645 61997788 -10156094 - MER47A DNA MER2_type -2179 144 1 2422 49 0 13 chr20 61997958 61998263 -10155619 - AluSc SINE Alu -8 301 1 1532 144 46 25 chr20 61998263 61998408 -10155474 - AluJo SINE Alu -22 290 150 2262 68 0 26 chr20 61998408 61998715 -10155167 - AluY SINE Alu -12 299 1 1532 144 46 25 chr20 61998715 61998853 -10155029 - AluJo SINE Alu -162 150 1 887 202 75 32 chr20 61998873 61999125 -10154757 + L1MD2 LINE L1 6095 6357 -2 2065 105 7 0 chr20 61999134 61999456 -10154426 + AluSq SINE Alu 1 324 0 1784 131 4 7 chr20 61999462 61999737 -10154145 + AluSx SINE Alu 1 274 -38 814 146 0 0 chr20 62000004 62000127 -10153755 - FLAM_C SINE Alu -19 124 2 1677 159 0 11 chr20 62000161 62000444 -10153438 - AluJo SINE Alu -30 282 3 1050 186 59 51 chr20 62000486 62000645 -10153237 - AluJo SINE Alu -21 291 135 315 0 0 0 chr20 62000645 62000680 -10153202 + (TG)n Simple_repeat Simple_repeat 2 36 0 1050 186 59 51 chr20 62000680 62000730 -10153152 - AluJo SINE Alu -177 135 87 2155 65 0 28 chr20 62000730 62001044 -10152838 + AluY SINE Alu 1 306 0 1050 186 59 51 chr20 62001044 62001085 -10152797 - AluJo SINE Alu -225 87 37 2117 129 0 0 chr20 62004728 62005039 -10148843 + AluSx SINE Alu 1 311 -1 1003 169 193 43 chr20 62005538 62005792 -10148090 + AluJb SINE Alu 1 292 -10 1518 101 123 0 chr20 62005822 62006050 -10147832 - AluSx SINE Alu -56 256 1 196 231 215 0 chr20 62006460 62006525 -10147357 - L2 LINE L2 -6 3266 3188 1763 123 95 0 chr20 62006617 62006902 -10146980 + AluSp SINE Alu 1 312 -1 581 222 159 23 chr20 62006978 62007154 -10146728 - MIR SINE MIR -18 244 45 1837 90 4 4 chr20 62007491 62007757 -10146125 + AluY SINE Alu 45 310 -1 238 239 128 43 chr20 62007860 62007977 -10145905 + L1ME LINE L1 5535 5661 -460 * 357 308 225 9 chr20 62007963 62008190 -10145692 + L1MB8 LINE L1 5508 5783 -2025 2259 93 6 13 chr20 62008234 62008547 -10145335 + AluSx SINE Alu 1 311 -1 1131 121 162 0 chr20 62008691 62008889 -10144993 - MER30 DNA MER1_type 0 230 1 204 320 117 0 chr20 62008891 62008994 -10144888 - MIR SINE MIR -66 196 82 511 231 183 0 chr20 62009111 62009297 -10144585 - MER106A DNA MER1_type -16 220 1 858 188 40 6 chr20 62009323 62009499 -10144383 + Charlie4a DNA MER1_type 36 217 -291 555 171 160 6 chr20 62009502 62009677 -10144205 + Charlie4a DNA MER1_type 253 454 -54 182 232 159 14 chr20 62010692 62010761 -10143121 + L2 LINE L2 3197 3275 -38 320 0 25 0 chr20 62011167 62011207 -10142675 + (CAAAA)n Simple_repeat Simple_repeat 2 42 0 21 36 0 0 chr20 62014606 62014634 -10139248 + GC_rich Low_complexity Low_complexity 1 28 0 305 344 110 32 chr20 62016729 62016947 -10136935 - MIR SINE MIR 0 262 28 2009 135 0 0 chr20 62017289 62017593 -10136289 + AluSx SINE Alu 1 304 -8 1980 108 34 0 chr20 62017884 62018180 -10135702 - AluSq SINE Alu -7 306 1 255 311 176 17 chr20 62018535 62018654 -10135228 + L2 LINE L2 3116 3253 -19 2767 116 78 61 chr20 62018729 62019046 -10134836 + L1MB2 LINE L1 5537 5868 -303 2260 74 13 10 chr20 62019046 62019355 -10134527 - AluY SINE Alu -1 310 1 2767 116 78 61 chr20 62019355 62019547 -10134335 + L1MB2 LINE L1 5868 6055 -116 394 217 38 45 chr20 62019563 62019720 -10134162 + L1MA9 LINE L1 6132 6287 -25 * 551 188 0 69 chr20 62019714 62019728 -10134154 + L1MB2 LINE L1 6038 6051 -120 2029 116 23 0 chr20 62019728 62020030 -10133852 + AluSg SINE Alu 1 309 -1 551 188 0 69 chr20 62020030 62020159 -10133723 + L1MB2 LINE L1 6051 6171 0 327 287 14 0 chr20 62020168 62020290 -10133592 + L1MB8 LINE L1 6060 6184 0 1640 158 6 40 chr20 62020998 62021320 -10132562 + AluJo SINE Alu 1 311 -1 976 188 0 0 chr20 62021320 62021490 -10132392 + AluJo/FRAM SINE Alu 134 303 -9 2089 103 10 0 chr20 62021491 62021783 -10132099 + AluSg SINE Alu 1 295 -15 2206 91 7 3 chr20 62021789 62022096 -10131786 + AluSq SINE Alu 3 310 -3 2403 57 3 0 chr20 62022197 62022498 -10131384 + AluY SINE Alu 1 302 -9 871 167 121 35 chr20 62022625 62022823 -10131059 + MER20 DNA MER1_type 1 215 -4 234 289 84 28 chr20 62023186 62023328 -10130554 - L1ME LINE L1 -322 5799 5650 25 0 0 0 chr20 62023915 62023940 -10129942 + AT_rich Low_complexity Low_complexity 1 25 0 263 348 111 43 chr20 62024490 62024697 -10129185 + MIR SINE MIR 37 257 -5 186 306 24 47 chr20 62024822 62024907 -10128975 - L2 LINE L2 0 3313 3231 1031 211 61 27 chr20 62025186 62025480 -10128402 - L2 LINE L2 -181 3132 2829 2076 109 0 0 chr20 62025556 62025841 -10128041 - AluSx SINE Alu -19 293 9 2122 122 0 3 chr20 62025982 62026293 -10127589 + AluSx SINE Alu 1 310 -2 2030 115 0 7 chr20 62026293 62026609 -10127273 - AluSg SINE Alu 0 310 1 909 195 6 6 chr20 62026655 62026824 -10127058 + FAM SINE Alu 2 170 -5 2286 116 0 0 chr20 62026945 62027247 -10126635 + AluY SINE Alu 1 302 -9 2453 276 91 19 chr20 62027268 62028362 -10125520 - L2 LINE L2 -540 2774 1602 2048 134 22 31 chr20 62028368 62028451 -10125431 - MER47A DNA MER2_type -1957 366 284 1682 120 8 47 chr20 62028451 62028554 -10125328 + AluSx SINE Alu 43 148 -164 2340 87 0 17 chr20 62028554 62028852 -10125030 + AluSg SINE Alu 1 293 -17 1682 120 8 47 chr20 62028852 62029006 -10124876 + AluSx SINE Alu 148 290 -22 2048 134 22 31 chr20 62029006 62029281 -10124601 - MER47A DNA MER2_type -2039 284 11 647 178 0 25 chr20 62029315 62029433 -10124449 + AluJo/FLAM SINE Alu 2 116 -186 2036 144 0 47 chr20 62029435 62029606 -10124276 - AluSx SINE Alu -8 304 127 2457 88 0 3 chr20 62029606 62029914 -10123968 - AluY SINE Alu -4 307 1 2536 73 0 6 chr20 62029914 62030227 -10123655 - AluY SINE Alu 0 311 1 2036 144 0 47 chr20 62030227 62030373 -10123509 - AluSx SINE Alu -183 129 1 180 77 0 0 chr20 62030373 62030399 -10123483 + (TTTTA)n Simple_repeat Simple_repeat 2 27 0 1733 119 38 11 chr20 62030401 62030662 -10123220 - AluSx SINE Alu -31 281 14 35 24 0 0 chr20 62030662 62030704 -10123178 + AT_rich Low_complexity Low_complexity 1 42 0 710 276 70 31 chr20 62030709 62030995 -10122887 - L2 LINE L2 -1760 1554 1258 760 169 6 22 chr20 62031015 62031198 -10122684 + CT-rich Low_complexity Low_complexity 1 180 0 244 209 0 0 chr20 62031198 62031241 -10122641 + polypyrimidine Low_complexity Low_complexity 3 45 0 1356 117 0 0 chr20 62031249 62031429 -10122453 - AluSp SINE Alu 0 313 134 1524 118 179 4 chr20 62031429 62031691 -10122191 - AluSq SINE Alu -5 308 1 1638 159 57 20 chr20 62031693 62031714 -10122168 - AluJb SINE Alu -5 307 288 453 62 0 0 chr20 62031714 62031779 -10122103 + (TA)n Simple_repeat Simple_repeat 2 66 0 1638 159 57 20 chr20 62031779 62032053 -10121829 - AluJb SINE Alu -24 288 1 1887 288 108 25 chr20 62032054 62032995 -10120887 - L2 LINE L2 -2084 1230 212 2464 64 0 35 chr20 62033006 62033320 -10120562 + AluSg SINE Alu 1 303 -7 370 234 188 23 chr20 62033347 62033475 -10120407 - MIR SINE MIR -36 226 78 1488 166 72 0 chr20 62033512 62033819 -10120063 + MER58D DNA MER1_type 18 346 -40 320 145 0 16 chr20 62033823 62033885 -10119997 + (TTCC)n Simple_repeat Simple_repeat 4 64 0 1472 188 35 41 chr20 62033888 62034062 -10119820 - AluJb SINE Alu 0 312 138 2311 106 0 0 chr20 62034062 62034363 -10119519 - AluSx SINE Alu -11 301 1 2162 124 0 16 chr20 62034366 62034673 -10119209 - AluSx SINE Alu -10 302 1 2640 61 0 3 chr20 62034679 62034991 -10118891 - AluY SINE Alu 0 311 1 1472 188 35 41 chr20 62034991 62035119 -10118763 - AluJb SINE Alu -181 131 1 279 160 20 0 chr20 62035119 62035169 -10118713 + MER58D DNA MER1_type 336 386 0 2316 115 0 0 chr20 62035330 62035642 -10118240 + AluSx SINE Alu 1 312 0 240 163 0 0 chr20 62035652 62035695 -10118187 + (TGAG)n Simple_repeat Simple_repeat 1 43 0 208 351 137 0 chr20 62036054 62036185 -10117697 - MIR SINE MIR -8 254 106 549 286 191 22 chr20 62036322 62036398 -10117484 - L2 LINE L2 -92 3221 3159 1856 161 23 7 chr20 62036398 62036702 -10117180 + AluSx SINE Alu 1 309 -3 1963 137 19 32 chr20 62036704 62037017 -10116865 + AluSx SINE Alu 1 309 -3 549 286 191 22 chr20 62037017 62037428 -10116454 - L2 LINE L2 -154 3159 2644 368 252 183 0 chr20 62037567 62037621 -10116261 - MER45A DNA AcHobo -1404 177 134 2588 62 0 0 chr20 62037621 62037930 -10115952 + AluY SINE Alu 1 309 -2 368 252 183 0 chr20 62037930 62037990 -10115892 - MER45A DNA AcHobo -1447 134 42 205 241 138 0 chr20 62038004 62038062 -10115820 - L2 LINE L2 -227 3086 3021 1436 156 49 78 chr20 62038089 62038397 -10115485 + AluJo SINE Alu 1 299 -13 2208 108 0 3 chr20 62038399 62038695 -10115187 + AluSx SINE Alu 1 295 -17 207 0 0 0 chr20 62038698 62038721 -10115161 + (GA)n Simple_repeat Simple_repeat 2 24 0 2282 74 7 7 chr20 62039001 62039284 -10114598 + AluSp SINE Alu 17 299 -14 237 208 0 42 chr20 62039446 62039494 -10114388 - L2 LINE L2 -6 3307 3262 336 296 87 17 chr20 62039701 62039873 -10114009 + L2 LINE L2 3103 3286 -27 2437 98 3 0 chr20 62040037 62040344 -10113538 + AluSq SINE Alu 1 308 -5 2388 97 0 3 chr20 62040433 62040731 -10113151 + AluSx SINE Alu 1 297 -15 442 311 70 30 chr20 62041228 62041559 -10112323 + L2 LINE L2 2772 3108 -205 231 162 0 0 chr20 62041562 62041599 -10112283 + L2 LINE L2 2930 2966 -306 683 124 0 0 chr20 62041612 62041725 -10112157 - AluSg/x SINE Alu 0 305 193 1137 177 105 88 chr20 62041739 62041879 -10112003 - AluJo SINE Alu -3 299 163 2143 133 0 3 chr20 62041879 62042180 -10111702 - AluSx SINE Alu -12 300 1 1137 177 105 88 chr20 62042180 62042333 -10111549 - AluJo SINE Alu -139 163 1 219 355 60 42 chr20 62042459 62042625 -10111257 + L2 LINE L2 3120 3288 -25 1768 138 101 0 chr20 62042753 62043029 -10110853 + AluSx SINE Alu 1 304 -8 486 119 0 0 chr20 62043029 62043113 -10110769 + (GA)n Simple_repeat Simple_repeat 1 84 0 1875 135 4 0 chr20 62043203 62043463 -10110419 - AluSx SINE Alu -51 261 1 654 307 35 13 chr20 62043488 62043719 -10110163 + MIR SINE MIR 9 244 -18 2486 53 0 10 chr20 62043732 62044032 -10109850 - AluY SINE Alu -14 297 1 1041 271 97 15 chr20 62044638 62045041 -10108841 + LTR33 LTR ERVL 1 436 -85 1116 163 41 5 chr20 62045041 62045237 -10108645 + AluSg/x SINE Alu 100 302 -10 2206 125 3 0 chr20 62045311 62045615 -10108267 - AluSx SINE Alu -3 309 5 411 283 81 58 chr20 62045888 62045914 -10107968 + MIR SINE MIR 3 27 -235 1020 231 163 15 chr20 62045914 62046252 -10107630 - MLT1B LTR MaLR -2 388 1 411 283 81 58 chr20 62046252 62046301 -10107581 + MIR SINE MIR 27 73 -189 2368 77 0 3 chr20 62046301 62046612 -10107270 - AluSx SINE Alu 0 310 1 411 283 81 58 chr20 62046612 62046676 -10107206 + MIR SINE MIR 73 134 -128 1361 155 44 98 chr20 62046676 62046993 -10106889 + AluJb SINE Alu 3 302 -10 411 283 81 58 chr20 62046993 62047073 -10106809 + MIR SINE MIR 134 230 -32 2217 73 36 0 chr20 62047097 62047372 -10106510 + AluY SINE Alu 12 296 -15 1243 284 65 55 chr20 62047473 62047820 -10106062 + L2 LINE L2 2359 2701 -612 2264 106 0 0 chr20 62047820 62048134 -10105748 + AluSx SINE Alu 1 312 0 1243 284 65 55 chr20 62048134 62048498 -10105384 + L2 LINE L2 2701 3060 -253 2085 156 0 10 chr20 62048498 62048812 -10105070 - AluSx SINE Alu -1 311 1 1243 284 65 55 chr20 62048812 62048823 -10105059 + L2 LINE L2 3060 3069 -244 2447 88 0 3 chr20 62048823 62049128 -10104754 - AluSc SINE Alu -5 304 1 1243 284 65 55 chr20 62049128 62049338 -10104544 + L2 LINE L2 3069 3299 -14 1340 155 65 65 chr20 62049469 62049588 -10104294 + AluJo SINE Alu 5 123 -189 1811 181 24 0 chr20 62049588 62049875 -10104007 - AluJb SINE Alu -15 297 4 1340 155 65 65 chr20 62049875 62050033 -10103849 + AluJo SINE Alu 122 282 -30 216 0 0 0 chr20 62050037 62050061 -10103821 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2267 75 0 0 chr20 62050730 62051009 -10102873 - AluY SINE Alu -32 279 1 574 285 11 17 chr20 62051010 62051189 -10102693 - MIR SINE MIR -35 227 50 390 21 0 0 chr20 62051233 62051280 -10102602 + (TCTA)n Simple_repeat Simple_repeat 4 50 0 2466 72 0 0 chr20 62051280 62051570 -10102312 - AluSx SINE Alu -22 290 1 25 0 0 0 chr20 62051606 62051631 -10102251 + AT_rich Low_complexity Low_complexity 1 25 0 1173 141 0 0 chr20 62051929 62052106 -10101776 - AluSp SINE Alu 0 313 137 2451 79 0 0 chr20 62052151 62052443 -10101439 - AluY SINE Alu -19 292 1 2636 37 0 7 chr20 62052472 62052771 -10101111 - AluY SINE Alu -12 299 3 27 0 0 0 chr20 62052773 62052800 -10101082 + AT_rich Low_complexity Low_complexity 1 27 0 2118 109 3 7 chr20 62052806 62053130 -10100752 + AluSq SINE Alu 1 323 0 339 25 0 0 chr20 62053343 62053383 -10100499 + (TC)n Simple_repeat Simple_repeat 1 40 0 234 271 0 0 chr20 62053650 62053698 -10100184 - L2 LINE L2 0 3313 3266 312 293 95 0 chr20 62053705 62053852 -10100030 - MER96 DNA MER1_type? -7 168 8 282 268 0 0 chr20 62053852 62053908 -10099974 - L2 LINE L2 -33 3280 3225 1955 154 3 7 chr20 62053994 62054287 -10099595 + AluJb SINE Alu 3 294 -18 2566 81 0 0 chr20 62054289 62054598 -10099284 + AluSq SINE Alu 1 309 -4 180 217 0 43 chr20 62055549 62055595 -10098287 - MIR SINE MIR -3 259 216 * 489 288 28 117 chr20 62055562 62055955 -10097927 - L2 LINE L2 -21 3251 2894 245 286 162 11 chr20 62056036 62056221 -10097661 - L2 LINE L2 -636 2678 2466 2335 108 0 9 chr20 62056399 62056534 -10097348 + AluSq SINE Alu 1 136 -177 2246 99 0 29 chr20 62056534 62056848 -10097034 + AluSq SINE Alu 1 305 -8 2335 108 0 9 chr20 62056848 62057027 -10096855 + AluSq SINE Alu 136 312 -1 317 232 212 99 chr20 62057493 62057551 -10096331 + MER5A DNA MER1_type 22 72 -117 2568 46 7 3 chr20 62057551 62057853 -10096029 + AluY SINE Alu 3 305 -6 317 232 212 99 chr20 62057853 62057945 -10095937 + MER5A DNA MER1_type 72 189 0 1485 148 55 127 chr20 62057955 62058285 -10095597 - AluJo SINE Alu -6 306 1 304 270 29 7 chr20 62058285 62058422 -10095460 + (TA)n Simple_repeat Simple_repeat 1 140 0 1265 56 0 19 chr20 62058568 62058729 -10095153 - AluY SINE Alu -153 158 1 21 0 0 0 chr20 62058758 62058779 -10095103 + AT_rich Low_complexity Low_complexity 1 21 0 532 301 23 70 chr20 62058846 62058990 -10094892 + L1MC4a LINE L1 5611 5760 -2048 2245 97 7 0 chr20 62058990 62059280 -10094602 + AluSx SINE Alu 3 294 -18 532 301 23 70 chr20 62059280 62059364 -10094518 + L1MC4a LINE L1 5760 5846 -1962 2433 94 0 3 chr20 62059364 62059672 -10094210 + AluSx SINE Alu 1 307 -5 532 301 23 70 chr20 62059672 62059827 -10094055 + L1MC4a LINE L1 5846 5977 -1831 249 180 0 0 chr20 62060964 62061014 -10092868 + GA-rich Low_complexity Low_complexity 1 50 0 1736 179 13 19 chr20 62061194 62061501 -10092381 - AluJb SINE Alu -7 305 1 232 213 33 0 chr20 62061659 62061720 -10092162 + (TATATG)n Simple_repeat Simple_repeat 4 66 0 268 235 35 47 chr20 62061807 62061892 -10091990 + MIR SINE MIR 69 152 -110 2143 133 7 3 chr20 62062007 62062315 -10091567 + AluSx SINE Alu 1 309 -3 1922 122 17 30 chr20 62062491 62062786 -10091096 + AluJb SINE Alu 12 302 -10 2250 106 3 13 chr20 62062868 62063170 -10090712 + AluSx SINE Alu 1 299 -13 373 220 64 9 chr20 62063170 62063279 -10090603 + L1MB8 LINE L1 6064 6178 0 2167 69 87 0 chr20 62063289 62063577 -10090305 + AluSp SINE Alu 1 313 0 2422 72 0 10 chr20 62063974 62064278 -10089604 - AluY SINE Alu -10 301 1 2500 74 0 0 chr20 62064480 62064776 -10089106 - AluSx SINE Alu -16 296 1 1725 181 3 7 chr20 62064890 62065182 -10088700 - AluJo SINE Alu -13 299 9 819 283 55 66 chr20 62065623 62065855 -10088027 + L1MC4a LINE L1 5378 5611 -2197 1998 116 27 36 chr20 62065855 62066156 -10087726 - AluSx SINE Alu -14 298 1 819 283 55 66 chr20 62066156 62066436 -10087446 + L1MC4a LINE L1 5611 5886 -1922 2169 105 10 30 chr20 62066436 62066741 -10087141 + AluSx SINE Alu 1 299 -13 819 283 55 66 chr20 62066741 62066789 -10087093 + L1MC4a LINE L1 5886 5933 -1875 380 200 0 0 chr20 62066791 62066866 -10087016 + MER116 DNA Mariner 1 75 -5 472 150 37 16 chr20 62066897 62066949 -10086933 - L1MD2 LINE L1 0 6359 6310 2609 57 0 16 chr20 62066949 62067265 -10086617 - AluY SINE Alu 0 311 1 472 150 37 16 chr20 62067265 62067575 -10086307 - L1MD2 LINE L1 -49 6310 5885 991 193 0 0 chr20 62067575 62067746 -10086136 - AluJo/FRAM SINE Alu -4 308 138 2546 79 0 0 chr20 62067749 62068053 -10085829 - AluSx SINE Alu -8 304 1 709 139 40 46 chr20 62068053 62068204 -10085678 - L1MD2 LINE L1 -568 5674 5525 2353 110 0 3 chr20 62068538 62068838 -10085044 - AluSx SINE Alu -13 299 1 328 301 87 46 chr20 62069165 62069361 -10084521 - MIR SINE MIR -50 212 9 1273 192 0 100 chr20 62069416 62069677 -10084205 + L1MB5 LINE L1 4914 5125 -1021 1365 130 232 8 chr20 62069677 62069923 -10083959 - AluSg SINE Alu -9 301 1 1273 192 0 100 chr20 62069923 62070052 -10083830 + L1MB5 LINE L1 5125 5265 -881 1211 99 0 0 chr20 62070063 62070214 -10083668 - AluSq/x SINE Alu -161 151 1 1025 195 30 9 chr20 62070218 62070449 -10083433 + L1MB5 LINE L1 5259 5494 -686 2208 116 7 0 chr20 62070459 62070752 -10083130 + AluSx SINE Alu 1 295 -17 2052 118 0 24 chr20 62070754 62071097 -10082785 + AluSc SINE Alu 1 336 0 2162 178 23 69 chr20 62071097 62071619 -10082263 + L1MB5 LINE L1 5668 6165 -9 2662 52 3 0 chr20 62071619 62071925 -10081957 - AluSp SINE Alu -6 307 1 2281 105 10 0 chr20 62073157 62073451 -10080431 - AluSx SINE Alu -10 302 6 185 239 183 0 chr20 62073653 62073724 -10080158 + MIR SINE MIR 179 262 0 337 241 15 0 chr20 62073730 62073863 -10080019 + (TCCA)n Simple_repeat Simple_repeat 4 138 0 492 136 0 0 chr20 62073892 62073980 -10079902 + (TCCA)n Simple_repeat Simple_repeat 3 90 0 194 341 70 31 chr20 62073982 62074111 -10079771 - L2 LINE L2 -1 3271 3138 216 0 0 0 chr20 62074329 62074353 -10079529 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 2020 64 135 25 chr20 62074779 62075060 -10078822 + AluSp SINE Alu 1 312 -1 611 283 178 13 chr20 62075060 62075442 -10078440 - MLT1J LTR MaLR -66 445 1 214 298 101 63 chr20 62075633 62075791 -10078091 + MIR SINE MIR 38 201 -61 2609 46 3 0 chr20 62075849 62076151 -10077731 - AluY SINE Alu -8 303 1 2009 123 42 0 chr20 62076233 62076518 -10077364 - AluSx SINE Alu -15 297 1 2127 102 35 0 chr20 62077069 62077352 -10076530 + AluSx SINE Alu 1 293 -19 533 277 230 34 chr20 62077593 62077649 -10076233 + L2 LINE L2 2122 2166 -1148 838 214 12 6 chr20 62077649 62077822 -10076060 + MER5B DNA MER1_type 5 178 0 533 277 230 34 chr20 62077822 62078144 -10075738 + L2 LINE L2 2166 2574 -740 230 205 0 0 chr20 62078233 62078272 -10075610 + AluJ/monomer SINE Alu 1 39 -263 2064 100 0 33 chr20 62078288 62078587 -10075295 - AluSx SINE Alu -23 289 1 808 141 7 7 chr20 62078587 62078722 -10075160 + AluJo/FRAM SINE Alu 162 296 -16 327 93 38 3 chr20 62078722 62078794 -10075088 + L1ME LINE L1 5371 5441 -721 2096 125 0 0 chr20 62078794 62079090 -10074792 + AluSx SINE Alu 1 296 -16 801 101 59 0 chr20 62079090 62079209 -10074673 + Tigger3(Golem) DNA MER2_type 2788 2913 -116 1126 196 63 103 chr20 62079247 62079312 -10074570 + L1ME3 LINE L1 5744 5810 -352 2456 46 3 3 chr20 62079312 62079616 -10074266 + AluY SINE Alu 1 304 -7 1126 196 63 103 chr20 62079616 62079939 -10073943 + L1ME3 LINE L1 5810 6116 -46 1715 90 82 41 chr20 62079939 62080206 -10073676 + AluSx SINE Alu 25 302 -10 1126 196 63 103 chr20 62080206 62080244 -10073638 + L1ME3 LINE L1 6116 6154 -8 1833 161 0 19 chr20 62080257 62080568 -10073314 + AluJb SINE Alu 1 305 -7 198 367 22 14 chr20 62080584 62080723 -10073159 + L2 LINE L2 2727 2866 -448 1980 121 3 3 chr20 62080723 62081013 -10072869 - AluSx SINE Alu -22 290 1 1096 288 115 12 chr20 62081087 62081591 -10072291 - L1ME3A LINE L1 -251 5919 5364 1723 156 0 33 chr20 62081769 62082076 -10071806 + AluSx SINE Alu 1 297 -15 2022 104 10 20 chr20 62082078 62082377 -10071505 + AluY SINE Alu 1 296 -15 29 0 0 0 chr20 62082417 62082446 -10071436 + AT_rich Low_complexity Low_complexity 1 29 0 2293 77 0 7 chr20 62082764 62083064 -10070818 - AluY SINE Alu -13 298 1 971 219 5 9 chr20 62083453 62083663 -10070219 - MER3 DNA MER1_type 0 209 1 1931 130 0 16 chr20 62083745 62084052 -10069830 - AluJb SINE Alu 0 312 11 2211 88 0 7 chr20 62084644 62084940 -10068942 - AluSc SINE Alu -15 294 1 378 250 156 0 chr20 62084968 62085064 -10068818 + MER81 DNA DNA 4 114 0 695 198 51 28 chr20 62085137 62085314 -10068568 - MIR SINE MIR -12 250 70 2034 123 3 16 chr20 62085368 62085549 -10068333 - AluSx SINE Alu -6 306 129 1914 116 41 3 chr20 62085549 62085841 -10068041 - AluSx SINE Alu -9 303 1 2034 123 3 16 chr20 62085841 62085969 -10067913 - AluSx SINE Alu -183 129 1 373 244 126 0 chr20 62086412 62086539 -10067343 - MIR SINE MIR -11 251 109 1063 183 9 36 chr20 62086559 62086783 -10067099 + MER20 DNA MER1_type 1 218 -1 378 123 18 0 chr20 62086963 62087020 -10066862 + L2 LINE L2 3256 3313 0 345 330 35 45 chr20 62087028 62087172 -10066710 - MIR SINE MIR 0 262 119 2315 83 0 3 chr20 62087172 62087474 -10066408 + AluY SINE Alu 1 301 -10 345 330 35 45 chr20 62087474 62087529 -10066353 - MIR SINE MIR -143 119 65 2001 92 27 14 chr20 62087632 62087925 -10065957 - AluY SINE Alu -14 297 1 1619 153 39 7 chr20 62088000 62088282 -10065600 - AluJo SINE Alu -19 293 3 2206 79 3 0 chr20 62088309 62088600 -10065282 + AluSc SINE Alu 1 292 -17 206 146 24 0 chr20 62089384 62089425 -10064457 + (CAA)n Simple_repeat Simple_repeat 2 43 0 1135 178 28 45 chr20 62089551 62089798 -10064084 + L1MB1 LINE L1 5890 6132 -36 2466 64 0 6 chr20 62089810 62090124 -10063758 + AluSp SINE Alu 1 312 -1 709 179 0 0 chr20 62090126 62090243 -10063639 + FLAM_C SINE Alu 2 118 -25 236 127 0 55 chr20 62090264 62090319 -10063563 + L1MB1 LINE L1 6116 6167 -1 2037 132 3 0 chr20 62090432 62090742 -10063140 - AluSq SINE Alu -2 311 1 23 0 0 0 chr20 62090782 62090805 -10063077 + AT_rich Low_complexity Low_complexity 1 23 0 2251 72 10 0 chr20 62090904 62091197 -10062685 - AluY SINE Alu -15 296 1 25 31 0 0 chr20 62091606 62091638 -10062244 + AT_rich Low_complexity Low_complexity 1 32 0 1895 90 28 55 chr20 62091638 62091927 -10061955 - AluSg SINE Alu -27 283 3 2070 115 3 3 chr20 62091942 62092247 -10061635 - AluSx SINE Alu -7 305 1 2093 122 3 0 chr20 62092248 62092543 -10061339 - AluSg SINE Alu -14 296 1 519 294 100 22 chr20 62092554 62092785 -10061097 - MIR SINE MIR -1 261 13 612 253 114 25 chr20 62093030 62093186 -10060696 + MIR SINE MIR 5 190 -72 1849 164 3 0 chr20 62093186 62093484 -10060398 + AluSx SINE Alu 1 299 -13 612 253 114 25 chr20 62093484 62093564 -10060318 + MIR SINE MIR 190 262 0 2168 102 0 3 chr20 62093698 62094002 -10059880 - AluSc SINE Alu -6 303 1 2610 189 15 60 chr20 62094072 62094545 -10059337 + L1MB7 LINE L1 5222 5666 -518 1433 171 37 68 chr20 62094545 62094867 -10059015 - AluSx SINE Alu 0 312 1 2610 189 15 60 chr20 62094867 62095057 -10058825 + L1MB7 LINE L1 5666 5863 -321 917 245 0 14 chr20 62095024 62095240 -10058642 + L1M4 LINE L1 4796 5008 -1138 * 726 169 0 0 chr20 62095248 62095366 -10058516 + FLAM_C SINE Alu 7 124 -19 239 229 0 0 chr20 62095376 62095437 -10058445 + L1M2 LINE L1 4992 5052 -1094 2071 107 0 3 chr20 62095441 62095771 -10058111 + AluSq SINE Alu 1 313 0 1201 151 20 124 chr20 62095779 62095876 -10058006 + L1M2 LINE L1 5514 5619 -693 1850 116 40 4 chr20 62095876 62096152 -10057730 + AluSx SINE Alu 1 286 -26 1201 151 20 124 chr20 62096152 62096352 -10057530 + L1M2 LINE L1 5619 5780 -532 2088 116 3 3 chr20 62096352 62096662 -10057220 + AluSx SINE Alu 1 310 -2 548 264 5 2 chr20 62096662 62096863 -10057019 + MER82 DNA MER2_type 412 647 -6 1944 123 0 30 chr20 62097238 62097539 -10056343 - AluSx SINE Alu -20 292 1 2195 72 3 47 chr20 62097566 62097885 -10055997 + AluSp SINE Alu 1 305 -8 2224 99 0 3 chr20 62097888 62098192 -10055690 + AluSg SINE Alu 2 304 -6 317 193 171 23 chr20 62098294 62098382 -10055500 + MIR SINE MIR 42 142 -120 695 180 0 8 chr20 62098569 62098691 -10055191 - FLAM_C SINE Alu -11 122 2 619 242 67 17 chr20 62098854 62099032 -10054850 + L2 LINE L2 3126 3312 -1 912 199 34 29 chr20 62099147 62099353 -10054529 - MER3 DNA MER1_type -2 207 1 1196 183 34 0 chr20 62099361 62099569 -10054313 + MER20B DNA MER1_type 1 215 -4 1085 193 65 40 chr20 62099910 62099970 -10053912 + MER58B DNA MER1_type 60 117 -2303 2057 114 3 16 chr20 62099970 62100286 -10053596 + AluSx SINE Alu 1 312 0 1085 193 65 40 chr20 62100286 62100500 -10053382 + MER58B DNA MER1_type 117 341 0 500 151 21 0 chr20 62101244 62101337 -10052545 - FLAM_C SINE Alu -6 137 43 192 77 0 0 chr20 62102088 62102114 -10051768 + (CA)n Simple_repeat Simple_repeat 1 26 0 494 152 45 27 chr20 62102128 62102240 -10051642 + MER58 DNA MER1_type 85 198 -143 265 281 124 16 chr20 62102464 62102585 -10051297 + MIR SINE MIR 129 262 0 2138 88 3 3 chr20 62102601 62102897 -10050985 - AluSc SINE Alu -13 296 1 271 98 24 0 chr20 62102963 62103004 -10050878 + MADE1 DNA Mariner 1 42 -38 1076 113 0 0 chr20 62103007 62103166 -10050716 - AluSg/x SINE Alu 0 312 154 521 100 0 0 chr20 62103166 62103236 -10050646 - AluSg/x SINE Alu -88 222 153 1517 125 5 0 chr20 62103236 62103460 -10050422 - AluSq SINE Alu -88 225 1 371 229 86 9 chr20 62103547 62103652 -10050230 + L1MB5 LINE L1 5545 5657 -464 1759 247 40 32 chr20 62103737 62103963 -10049919 - L1MEc LINE L1 -3679 2536 2313 1847 147 0 41 chr20 62103963 62104283 -10049599 + AluSx SINE Alu 1 307 -5 1759 247 40 32 chr20 62104283 62104769 -10049113 - L1MEc LINE L1 -3902 2313 1854 2261 81 3 0 chr20 62104769 62105066 -10048816 - AluSg SINE Alu -12 298 1 780 161 0 0 chr20 62105081 62105224 -10048658 - L1MC3 LINE L1 -7 7778 7636 2000 122 0 3 chr20 62105238 62105550 -10048332 - AluSx SINE Alu 0 311 1 463 52 0 0 chr20 62105550 62105608 -10048274 - AluSq/x SINE Alu -177 135 78 1261 168 0 9 chr20 62105608 62105822 -10048060 - AluSx SINE Alu -100 212 1 447 161 0 0 chr20 62105826 62105907 -10047975 - L1MC3 LINE L1 -159 7626 7546 953 174 112 5 chr20 62205908 62206104 -9947778 + L1MB5 LINE L1 5644 5860 -314 352 291 12 0 chr20 62206105 62206191 -9947691 + L2 LINE L2 3226 3312 -1 183 80 0 0 chr20 62206283 62206308 -9947574 + (GAAAA)n Simple_repeat Simple_repeat 5 29 0 469 304 48 44 chr20 62206556 62206829 -9947053 + MARNA DNA Mariner 76 349 -237 615 226 171 25 chr20 62206868 62207067 -9946815 + MIR SINE MIR 9 236 -26 1945 169 0 0 chr20 62207131 62207433 -9946449 + AluJb SINE Alu 1 302 -10 22 0 0 0 chr20 62207474 62207496 -9946386 + AT_rich Low_complexity Low_complexity 1 22 0 2079 209 87 9 chr20 62207549 62208009 -9945873 - MLT1D LTR MaLR -9 496 1 596 228 123 61 chr20 62209335 62209377 -9944505 + MLT1E3 LTR MaLR 1 39 -587 391 245 68 20 chr20 62209377 62209524 -9944358 + MLT2C1 LTR ERVL 44 197 -200 596 228 123 61 chr20 62209524 62209606 -9944276 + MLT1E3 LTR MaLR 39 260 -366 250 333 93 16 chr20 62209613 62209796 -9944086 + MIR SINE MIR 66 262 0 225 0 0 0 chr20 62209995 62210020 -9943862 + (T)n Simple_repeat Simple_repeat 1 25 0 2004 137 20 0 chr20 62210260 62210559 -9943323 + AluSx SINE Alu 3 307 -5 640 232 112 54 chr20 62211098 62211490 -9942392 - L1ME4a LINE L1 -115 6006 5592 615 230 9 0 chr20 62211640 62211753 -9942129 + MER81 DNA DNA 1 114 0 451 282 62 119 chr20 62212795 62213054 -9940828 - L2 LINE L2 0 3313 3106 2216 205 29 8 chr20 62213054 62213537 -9940345 + L1MB7 LINE L1 5683 6175 -9 451 282 62 119 chr20 62213537 62213836 -9940046 - L2 LINE L2 -207 3106 2792 391 284 168 13 chr20 62213965 62214120 -9939762 - MIR SINE MIR -77 185 7 1009 230 0 6 chr20 62214131 62214309 -9939573 + MER45A DNA AcHobo 2 178 0 207 0 0 0 chr20 62214624 62214647 -9939235 + (TAA)n Simple_repeat Simple_repeat 2 24 0 198 143 0 0 chr20 62214701 62214736 -9939146 + (TG)n Simple_repeat Simple_repeat 1 35 0 933 129 0 50 chr20 62215139 62215279 -9938603 + FLAM_C SINE Alu 1 133 0 2097 127 0 13 chr20 62216084 62216400 -9937482 - AluSx SINE Alu 0 312 1 201 291 102 24 chr20 62216858 62216985 -9936897 - MIR SINE MIR -14 248 112 566 210 26 8 chr20 62217000 62217134 -9936748 + MIR SINE MIR 19 154 -59 323 214 14 0 chr20 62217134 62217204 -9936678 + MER46C DNA MER2_type 1 71 -267 586 130 0 0 chr20 62217214 62217306 -9936576 - MER53 DNA DNA -95 94 3 316 226 24 24 chr20 62217309 62217393 -9936489 + MER46C DNA MER2_type 69 152 -186 468 302 39 17 chr20 62217397 62217576 -9936306 - L2 LINE L2 -350 2964 2782 238 263 0 18 chr20 62217589 62217646 -9936236 - MIR SINE MIR -166 96 41 228 309 161 0 chr20 62218170 62218251 -9935631 - L2 LINE L2 -10 3303 3210 807 229 88 9 chr20 62218354 62218581 -9935301 - MIR SINE MIR 0 262 18 953 236 49 29 chr20 62219355 62219601 -9934281 + MER20B DNA MER1_type 1 251 -532 925 136 0 0 chr20 62219631 62219815 -9934067 - AluSx SINE Alu 0 312 162 756 84 0 28 chr20 62219815 62219922 -9933960 - AluSx SINE Alu -208 105 2 2448 81 0 0 chr20 62219934 62220242 -9933640 - AluY SINE Alu -3 308 1 1272 244 37 3 chr20 62220244 62220568 -9933314 + MER20B DNA MER1_type 296 630 -153 863 293 74 24 chr20 62220708 62221087 -9932795 + LTR16C LTR ERVL 90 487 -4 227 286 0 0 chr20 62221090 62221153 -9932729 + MER20B DNA MER1_type 721 783 0 875 199 7 0 chr20 62221427 62221573 -9932309 + AluJb SINE Alu 138 284 -28 317 298 151 34 chr20 62221636 62221874 -9932008 - L2 LINE L2 0 3313 3048 239 336 95 7 chr20 62224259 62224396 -9929486 + MIR SINE MIR 44 192 -70 303 341 130 18 chr20 62224576 62224799 -9929083 - MIR SINE MIR 0 262 15 2159 121 0 25 chr20 62224873 62225187 -9928695 + AluSx SINE Alu 1 306 -6 2403 66 20 3 chr20 62225329 62225630 -9928252 - AluY SINE Alu -5 306 1 1764 136 21 24 chr20 62226053 62226370 -9927512 - AluSx SINE Alu 0 316 1 701 248 154 70 chr20 62226546 62226739 -9927143 - L2 LINE L2 -10 3303 3128 1991 151 0 10 chr20 62226739 62227043 -9926839 + AluJb SINE Alu 1 301 -11 701 248 154 70 chr20 62227043 62227184 -9926698 - L2 LINE L2 -185 3128 3000 2118 120 0 13 chr20 62227184 62227485 -9926397 + AluSx SINE Alu 1 297 -15 701 248 154 70 chr20 62227485 62227635 -9926247 - L2 LINE L2 -313 3000 2763 302 264 16 66 chr20 62227833 62227954 -9925928 + MIR SINE MIR 35 149 -59 421 235 78 72 chr20 62228114 62228238 -9925644 - Charlie8 DNA MER1_type -147 194 67 1926 153 0 10 chr20 62228238 62228539 -9925343 + AluJo SINE Alu 1 298 -14 421 235 78 72 chr20 62228539 62228580 -9925302 - Charlie8 DNA MER1_type -274 67 28 1275 231 142 12 chr20 62228598 62229000 -9924882 - MLT1C LTR MaLR -8 459 6 885 200 171 80 chr20 62229232 62229363 -9924519 - MLT1C LTR MaLR 0 467 349 2157 122 3 0 chr20 62229363 62229659 -9924223 + AluSx SINE Alu 11 307 -5 885 200 171 80 chr20 62229659 62229902 -9923980 - MLT1C LTR MaLR -118 349 59 1936 161 3 3 chr20 62229954 62230258 -9923624 + AluSx SINE Alu 1 304 -8 320 62 0 21 chr20 62230258 62230306 -9923576 + (GGAA)n Simple_repeat Simple_repeat 1 47 0 549 284 55 6 chr20 62231295 62231478 -9922404 - L2 LINE L2 -664 2650 2459 5455 133 47 9 chr20 62231742 62232409 -9921473 - L1PA15 LINE L1 -5 6160 5425 180 0 0 0 chr20 62232409 62232429 -9921453 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 5455 133 47 9 chr20 62232429 62232681 -9921201 - L1PA15 LINE L1 -740 5425 5184 236 250 0 0 chr20 62232803 62232851 -9921031 + (CA)n Simple_repeat Simple_repeat 2 49 0 321 211 11 22 chr20 62232928 62233018 -9920864 - MER113 DNA MER1_type? -430 91 3 317 338 136 0 chr20 62233811 62233965 -9919917 - L2 LINE L2 -210 3062 2888 597 223 9 0 chr20 62233982 62234094 -9919788 + MER81 DNA DNA 1 113 -1 332 174 238 52 chr20 62234231 62234383 -9919499 - MLT1H1 LTR MaLR -10 644 349 853 240 88 20 chr20 62234509 62234759 -9919123 - MLT1H1 LTR MaLR -277 278 12 372 270 0 0 chr20 62235213 62235302 -9918580 - MER58B DNA MER1_type 0 341 253 1840 165 0 10 chr20 62235337 62235634 -9918248 + AluJb SINE Alu 1 294 -18 2060 127 3 0 chr20 62235818 62236138 -9917744 + AluSx SINE Alu 1 321 0 194 255 0 0 chr20 62236809 62236856 -9917026 + L2 LINE L2 3204 3250 -22 1923 151 0 0 chr20 62236856 62237164 -9916718 + AluJb SINE Alu 1 308 0 243 0 0 0 chr20 62237896 62237923 -9915959 + (TG)n Simple_repeat Simple_repeat 1 27 0 276 233 8 75 chr20 62238159 62238279 -9915603 - MER113 DNA MER1_type? -409 112 1 238 368 83 0 chr20 62238767 62238960 -9914922 + MIR SINE MIR 51 259 -3 333 254 77 21 chr20 62240572 62240715 -9913167 + MIR SINE MIR 30 181 -63 2204 106 6 10 chr20 62240739 62241051 -9912831 + AluSq SINE Alu 3 313 0 2019 129 3 3 chr20 62241236 62241547 -9912335 + AluSx SINE Alu 1 311 0 267 277 32 0 chr20 62242297 62242391 -9911491 + MIR SINE MIR 48 144 -64 2483 58 6 13 chr20 62242599 62242912 -9910970 + AluY SINE Alu 1 311 0 222 290 35 41 chr20 62243535 62243680 -9910202 - L2 LINE L2 -339 2933 2809 2166 120 3 10 chr20 62245527 62245826 -9908056 + AluSx SINE Alu 4 300 -12 185 290 72 14 chr20 62246109 62246178 -9907704 - L2 LINE L2 -46 3226 3154 2089 100 57 20 chr20 62246341 62246642 -9907240 - AluSx SINE Alu 0 312 1 1279 155 19 5 chr20 62247454 62247667 -9906215 + MER20 DNA MER1_type 3 218 -1 2531 41 0 16 chr20 62248327 62248641 -9905241 - L1P3 LINE L1 -423 5731 5423 973 229 33 5 chr20 62248641 62248855 -9905027 - MER58A DNA MER1_type -4 220 1 2317 75 4 0 chr20 62248875 62249209 -9904673 - AluY SINE Alu 0 335 1 550 192 125 17 chr20 62249212 62249362 -9904520 - FLAM_C SINE Alu 0 163 1 2052 144 7 0 chr20 62249426 62249731 -9904151 + AluSx SINE Alu 1 307 -5 373 295 87 51 chr20 62249733 62249938 -9903944 + L1ME4a LINE L1 5625 5850 -271 2113 110 41 3 chr20 62249938 62250228 -9903654 + AluSx SINE Alu 1 301 -11 373 295 87 51 chr20 62250228 62250392 -9903490 + L1ME4a LINE L1 5850 6007 -114 1807 128 15 66 chr20 62250459 62250601 -9903281 - L1PA15 LINE L1 0 6165 6017 1884 144 24 0 chr20 62250601 62250893 -9902989 - AluSx SINE Alu -13 299 1 1807 128 15 66 chr20 62250893 62251085 -9902797 - L1PA15 LINE L1 -148 6017 5848 330 333 44 6 chr20 62251160 62251319 -9902563 + MIR SINE MIR 85 249 -13 716 208 153 31 chr20 62251358 62251421 -9902461 + L1MD2 LINE L1 6070 6124 -235 297 51 0 0 chr20 62251421 62251460 -9902422 + (CA)n Simple_repeat Simple_repeat 2 40 0 716 208 153 31 chr20 62251460 62251651 -9902231 + L1MD2 LINE L1 6124 6355 -4 320 330 20 0 chr20 62252232 62252332 -9901550 - L2 LINE L2 -2 3270 3169 243 0 0 0 chr20 62252627 62252654 -9901228 + (A)n Simple_repeat Simple_repeat 1 27 0 2229 78 0 7 chr20 62253696 62254004 -9899878 - AluY SINE Alu 0 306 1 589 265 35 12 chr20 62254068 62254238 -9899644 - MIR SINE MIR -31 231 58 1851 145 14 17 chr20 62254342 62254631 -9899251 + AluJb SINE Alu 11 298 -14 7534 41 0 7 chr20 62254687 62255912 -9897970 + L1PA5 LINE L1 4936 6154 0 188 325 104 0 chr20 62255951 62256028 -9897854 - MIR SINE MIR -91 117 33 424 258 62 71 chr20 62256167 62256236 -9897646 + MIR SINE MIR 15 83 -179 1868 163 3 10 chr20 62256236 62256536 -9897346 + AluJo SINE Alu 1 298 -14 424 258 62 71 chr20 62256536 62256706 -9897176 + MIR SINE MIR 83 252 -10 488 281 66 31 chr20 62258188 62258416 -9895466 - MIR SINE MIR -25 237 2 252 257 0 0 chr20 62258773 62258843 -9895039 - MIR SINE MIR -113 149 80 276 225 42 67 chr20 62258902 62259022 -9894860 - L2 LINE L2 -35 3278 3162 1673 176 3 99 chr20 62259031 62259166 -9894716 + MER7A DNA MER2_type 1 147 -2891 4348 79 37 19 chr20 62259166 62259537 -9894345 - L1PB1 LINE L1 -1 6150 5762 2472 83 0 3 chr20 62259537 62259849 -9894033 - AluY SINE Alu 0 311 1 4348 79 37 19 chr20 62259849 62260098 -9893784 - L1PB1 LINE L1 -389 5762 5519 1673 176 3 99 chr20 62260098 62260336 -9893546 + MER7A DNA MER2_type 147 336 -10 270 318 133 19 chr20 62260342 62260606 -9893276 - L2 LINE L2 -184 3129 2836 1753 159 132 0 chr20 62260710 62261037 -9892845 - L1PA16 LINE L1 -9 6157 5788 1977 149 7 0 chr20 62262735 62263030 -9890852 + AluSx SINE Alu 1 297 -15 541 315 88 36 chr20 62263252 62263480 -9890402 - L2 LINE L2 0 3313 3098 1872 149 3 40 chr20 62263480 62263802 -9890080 + AluJo SINE Alu 1 310 -2 541 315 88 36 chr20 62263802 62264242 -9889640 - L2 LINE L2 -215 3098 2602 364 307 159 36 chr20 62264377 62264654 -9889228 - L2 LINE L2 -3 3310 3000 1105 189 70 9 chr20 62265565 62265792 -9888090 - MER58 DNA MER1_type -2179 241 1 204 300 89 11 chr20 62265988 62266078 -9887804 + L2 LINE L2 3151 3247 -25 2466 97 0 0 chr20 62267601 62267911 -9885971 - AluSx SINE Alu 0 312 3 360 0 0 0 chr20 62268354 62268394 -9885488 + (TTA)n Simple_repeat Simple_repeat 1 40 0 2045 136 3 0 chr20 62268446 62268741 -9885141 - AluSx SINE Alu -16 296 1 442 248 94 60 chr20 62269173 62269313 -9884569 + MIR SINE MIR 11 164 -98 1657 212 0 0 chr20 62269313 62269620 -9884262 + AluJo SINE Alu 1 307 -5 442 248 94 60 chr20 62269620 62269713 -9884169 + MIR SINE MIR 164 252 -10 180 0 0 0 chr20 62269769 62269789 -9884093 + (TTTC)n Simple_repeat Simple_repeat 1 20 0 734 143 0 0 chr20 62270165 62270291 -9883591 - L1MB3 LINE L1 0 6183 6058 590 248 171 69 chr20 62270761 62271152 -9882730 - LTR16C LTR ERVL 0 491 61 326 121 61 0 chr20 62271152 62271218 -9882664 + AluJ/FLAM SINE Alu 1 70 -232 690 270 26 0 chr20 62271220 62271409 -9882473 + MIR SINE MIR 48 241 -21 23 24 0 24 chr20 62271626 62271646 -9882236 + AT_rich Low_complexity Low_complexity 1 20 -20 1688 139 77 11 chr20 62271646 62271919 -9881963 + AluJb SINE Alu 21 311 -1 23 24 0 24 chr20 62271919 62271939 -9881943 + AT_rich Low_complexity Low_complexity 20 40 0 1572 126 0 5 chr20 62272115 62272330 -9881552 + AluJo SINE Alu 12 225 -87 405 171 0 26 chr20 62272358 62272434 -9881448 + AluJo SINE Alu 217 290 -22 399 278 136 5 chr20 62272594 62272792 -9881090 + MIR SINE MIR 39 262 0 237 65 0 0 chr20 62273217 62273248 -9880634 + (TTCA)n Simple_repeat Simple_repeat 2 32 0 2197 116 0 0 chr20 62273249 62273542 -9880340 - AluSg SINE Alu -17 293 1 850 219 18 14 chr20 62273898 62274117 -9879765 - MIR SINE MIR -28 234 15 699 241 20 22 chr20 62274126 62274353 -9879529 + MER58A DNA MER1_type 1 226 0 285 259 49 0 chr20 62274353 62274429 -9879453 + MER58A DNA MER1_type 143 222 -2 1900 166 0 3 chr20 62274585 62274874 -9879008 + AluJb SINE Alu 1 288 -24 755 156 7 0 chr20 62274874 62275015 -9878867 + GA-rich Low_complexity Low_complexity 1 142 0 43750 35 21 2 chr20 62275029 62281036 -9872846 + L1PA2 LINE L1 4 6131 -24 217 0 103 0 chr20 62281036 62281075 -9872807 + (TAAA)n Simple_repeat Simple_repeat 3 180 0 43750 35 21 2 chr20 62281075 62281101 -9872781 + L1PA2 LINE L1 6131 6155 0 320 290 22 22 chr20 62281115 62281253 -9872629 - MER20B DNA MER1_type 0 783 646 2297 118 0 10 chr20 62281265 62281579 -9872303 + AluSx SINE Alu 1 311 -1 367 290 161 6 chr20 62281603 62281765 -9872117 - MER5A DNA MER1_type 0 189 3 1227 256 31 0 chr20 62281768 62282085 -9871797 - MER20B DNA MER1_type -231 552 226 876 210 5 67 chr20 62282079 62282303 -9871579 + MER20 DNA MER1_type 5 214 -5 * 1793 132 0 80 chr20 62282350 62282446 -9871436 + AluJo SINE Alu 13 115 -197 2354 108 0 0 chr20 62282446 62282751 -9871131 - AluSq SINE Alu -8 305 1 1793 132 0 80 chr20 62282751 62282980 -9870902 + AluJo SINE Alu 115 312 0 302 287 79 30 chr20 62283008 62283109 -9870773 - MER20B DNA MER1_type -620 163 58 24 53 0 0 chr20 62283368 62283406 -9870476 + AT_rich Low_complexity Low_complexity 1 38 0 1899 158 0 31 chr20 62283672 62283994 -9869888 + AluJo SINE Alu 1 312 0 2377 93 3 10 chr20 62284204 62284517 -9869365 + AluSp SINE Alu 1 311 -2 695 45 0 0 chr20 62284910 62284999 -9868883 + L1MA1 LINE L1 6214 6302 0 1920 161 0 10 chr20 62285003 62285314 -9868568 + AluJb SINE Alu 1 308 -4 21 0 0 0 chr20 62285314 62285335 -9868547 + AT_rich Low_complexity Low_complexity 1 21 0 607 133 177 9 chr20 62285535 62285648 -9868234 + AluJo SINE Alu 1 132 -170 389 231 39 0 chr20 62285649 62285727 -9868155 + AluJo SINE Alu 132 212 -90 1085 139 24 0 chr20 62285728 62285893 -9867989 + AluJ SINE Alu 114 282 -30 26 0 0 0 chr20 62285924 62285950 -9867932 + AT_rich Low_complexity Low_complexity 1 26 0 565 161 15 85 chr20 62286034 62286164 -9867718 + MER103 DNA DNA 11 131 -35 233 328 8 30 chr20 62286659 62286765 -9867117 + MIR SINE MIR 17 121 -141 2094 145 0 0 chr20 62286765 62287068 -9866814 - AluSx SINE Alu -9 303 1 233 328 8 30 chr20 62287068 62287092 -9866790 + MIR SINE MIR 121 144 -118 437 285 30 34 chr20 62287505 62287740 -9866142 + L1ME4a LINE L1 5602 5835 -286 2211 126 0 0 chr20 62287809 62288102 -9865780 + AluSx SINE Alu 1 293 -19 2512 162 26 26 chr20 62288249 62288756 -9865126 - L1MB3 LINE L1 -2 6181 5675 23 0 0 0 chr20 62288761 62288784 -9865098 + AT_rich Low_complexity Low_complexity 1 23 0 1246 206 94 0 chr20 62288803 62289080 -9864802 + AluJb SINE Alu 1 303 -9 1475 154 15 8 chr20 62289080 62289333 -9864549 - L1PA16 LINE L1 -10 6156 5902 189 0 0 0 chr20 62289655 62289676 -9864206 + (A)n Simple_repeat Simple_repeat 1 21 0 401 232 27 18 chr20 62292680 62292792 -9861090 - L2 LINE L2 -4 3309 3197 2229 113 0 10 chr20 62296385 62296687 -9857195 + AluSx SINE Alu 1 299 -13 21 36 0 0 chr20 62297568 62297596 -9856286 + AT_rich Low_complexity Low_complexity 1 28 0 201 74 0 0 chr20 62297893 62297920 -9855962 + (T)n Simple_repeat Simple_repeat 1 27 0 237 244 0 0 chr20 62298479 62298524 -9855358 - L2 LINE L2 -2 3270 3226 229 321 49 0 chr20 62298557 62298638 -9855244 + MIR SINE MIR 15 99 -163 2385 82 0 0 chr20 62298665 62298958 -9854924 + AluY SINE Alu 2 294 -17 342 302 228 22 chr20 62299112 62299344 -9854538 + L2 LINE L2 2462 2741 -573 998 238 23 5 chr20 62299346 62299560 -9854322 - MER58A DNA MER1_type -3 221 4 1514 238 31 42 chr20 62299594 62300019 -9853863 - LTR16C LTR ERVL 0 491 72 2470 92 0 0 chr20 62300127 62300432 -9853450 - AluSx SINE Alu -7 305 1 291 297 50 10 chr20 62300745 62300846 -9853036 + L2 LINE L2 3208 3312 -1 2189 122 3 0 chr20 62301213 62301507 -9852375 + AluSx SINE Alu 1 295 -17 2318 92 0 0 chr20 62301523 62301846 -9852036 + AluY SINE Alu 4 326 0 1917 154 0 0 chr20 62301848 62302177 -9851705 + AluSx SINE Alu 1 329 0 207 0 0 0 chr20 62302441 62302464 -9851418 + (CA)n Simple_repeat Simple_repeat 2 24 0 1032 156 0 0 chr20 62302575 62302755 -9851127 + (TA)n Simple_repeat Simple_repeat 1 180 0 856 306 86 46 chr20 62302763 62303266 -9850616 + L1ME LINE L1 5292 5816 -305 2370 95 0 16 chr20 62303436 62303751 -9850131 - AluSx SINE Alu -2 310 1 588 59 24 0 chr20 62303813 62303898 -9849984 + Alu SINE Alu 226 312 0 26 0 0 0 chr20 62303898 62303924 -9849958 + AT_rich Low_complexity Low_complexity 1 26 0 307 196 21 93 chr20 62303924 62304021 -9849861 + L1MC4 LINE L1 6614 6703 -1339 * 319 281 21 21 chr20 62303943 62304039 -9849843 - L1MC4 LINE L1 -1339 6703 6608 2198 117 3 0 chr20 62304095 62304394 -9849488 - AluSc SINE Alu -9 300 1 237 65 0 0 chr20 62304423 62304454 -9849428 + (TTCA)n Simple_repeat Simple_repeat 2 32 0 2197 116 0 0 chr20 62304455 62304748 -9849134 - AluSg SINE Alu -17 293 1 190 276 10 10 chr20 62305247 62305345 -9848537 + (TATG)n Simple_repeat Simple_repeat 3 100 0 258 32 0 0 chr20 62305350 62305381 -9848501 + (CA)n Simple_repeat Simple_repeat 2 32 0 720 236 116 5 chr20 62306034 62306233 -9847649 + MER58A DNA MER1_type 2 222 -2 549 184 19 0 chr20 62306523 62306626 -9847256 - MER20 DNA MER1_type -5 214 110 423 52 0 0 chr20 62306766 62306824 -9847058 + (CA)n Simple_repeat Simple_repeat 2 59 0 2271 122 0 0 chr20 62306829 62307141 -9846741 - AluSx SINE Alu 0 312 1 302 265 75 54 chr20 62307174 62307321 -9846561 - L3b LINE CR1 -141 1442 1293 445 321 119 11 chr20 62307411 62307688 -9846194 - L2 LINE L2 -2 3311 3005 1990 145 72 20 chr20 62307912 62308257 -9845625 - THE1B LTR MaLR -1 363 1 259 320 96 16 chr20 62308814 62308939 -9844943 + MIR SINE MIR 69 203 -59 636 305 32 20 chr20 62308948 62309194 -9844688 - MIR SINE MIR 0 262 14 446 327 122 21 chr20 62309556 62309932 -9843950 - L2 LINE L2 -2 3311 2898 2214 57 9 111 chr20 62309992 62310325 -9843557 + AluY SINE Alu 1 299 -12 274 262 67 54 chr20 62310333 62310482 -9843400 - MER103 DNA DNA -8 158 8 247 230 0 81 chr20 62310618 62310705 -9843177 - L2 LINE L2 -6 3266 3187 2623 36 20 7 chr20 62311219 62311525 -9842357 - AluY SINE Alu -1 310 1 266 239 0 30 chr20 62312526 62312593 -9841289 - MIR SINE MIR -62 146 82 1779 152 55 3 chr20 62312661 62312951 -9840931 + AluSx SINE Alu 1 305 -7 853 200 57 19 chr20 62313374 62313584 -9840298 + MER20 DNA MER1_type 1 218 -1 901 125 54 150 chr20 62313649 62313889 -9839993 - MER20 DNA MER1_type -1 218 2 4344 82 25 8 chr20 62314106 62314702 -9839180 - L1PA10 LINE L1 0 6168 5563 1464 226 33 0 chr20 62315127 62315433 -9838449 - MER58B DNA MER1_type 0 341 26 273 196 18 0 chr20 62318739 62318795 -9835087 + MER20 DNA MER1_type 148 204 -15 2383 96 72 17 chr20 62318877 62319222 -9834660 + THE1B LTR MaLR 1 364 0 849 259 44 5 chr20 62319389 62319594 -9834288 - MER20 DNA MER1_type 0 219 7 2153 116 0 0 chr20 62319657 62319949 -9833933 - AluSx SINE Alu -20 292 1 25 31 0 0 chr20 62319975 62320007 -9833875 + AT_rich Low_complexity Low_complexity 1 32 0 880 147 0 22 chr20 62320092 62320228 -9833654 + FLAM_C SINE Alu 1 133 0 234 105 0 0 chr20 62320276 62320314 -9833568 + (TTTAG)n Simple_repeat Simple_repeat 3 40 0 2038 98 44 0 chr20 62320317 62320591 -9833291 - AluSx SINE Alu -26 286 1 208 222 32 32 chr20 62320610 62320673 -9833209 - MIR SINE MIR -65 143 81 2133 130 16 3 chr20 62320723 62321031 -9832851 + AluSx SINE Alu 1 312 0 595 174 0 0 chr20 62321088 62321197 -9832685 - MIR SINE MIR -16 246 138 4730 122 17 1 chr20 62321530 62322227 -9831655 - L1PB3 LINE L1 -1 6153 5446 413 78 0 3 chr20 62322229 62322295 -9831587 + L1PB3 LINE L1 5385 5449 -672 243 255 39 29 chr20 62322337 62322439 -9831443 - MLT1L LTR MaLR -6 609 507 1247 195 3 118 chr20 62322766 62323104 -9830778 + AluJb SINE Alu 3 301 -1 450 49 0 0 chr20 62323107 62323168 -9830714 + (CA)n Simple_repeat Simple_repeat 2 62 0 280 258 0 15 chr20 62323168 62323234 -9830648 - MLT1L LTR MaLR -550 65 1 2053 134 3 7 chr20 62323424 62323714 -9830168 - AluSx SINE Alu -23 289 1 249 243 68 0 chr20 62323798 62323872 -9830010 - MIR SINE MIR -46 216 138 186 345 0 0 chr20 62324739 62324797 -9829085 - L2 LINE L2 -9 3263 3206 2317 92 0 3 chr20 62325064 62325357 -9828525 - AluSg SINE Alu -18 292 1 560 249 99 0 chr20 62325392 62325575 -9828307 + MIR SINE MIR 53 252 -10 2029 130 0 17 chr20 62326069 62326395 -9827487 - AluSx SINE Alu 0 321 1 193 228 0 119 chr20 62326531 62326632 -9827250 + L2 LINE L2 3007 3095 -177 2244 128 0 0 chr20 62326735 62327047 -9826835 + AluSx SINE Alu 1 312 0 1042 273 110 41 chr20 62327048 62327181 -9826701 - MLT1K LTR MaLR -34 554 432 2537 158 22 2 chr20 62327181 62327598 -9826284 + MSTB LTR MaLR 2 426 0 1042 273 110 41 chr20 62327598 62327643 -9826239 - MLT1K LTR MaLR -156 432 392 1906 129 58 3 chr20 62327643 62327938 -9825944 - AluSx SINE Alu -1 311 1 1042 273 110 41 chr20 62327938 62328220 -9825662 - MLT1K LTR MaLR -196 392 61 2250 107 3 0 chr20 62328223 62328521 -9825361 + AluSp SINE Alu 1 299 -14 21 0 0 0 chr20 62328890 62328911 -9824971 + AT_rich Low_complexity Low_complexity 1 21 0 479 256 7 15 chr20 62330040 62330177 -9823705 - L2 LINE L2 -1 3271 3136 225 260 62 73 chr20 62330183 62330279 -9823603 - MER5B DNA MER1_type 0 178 84 401 223 14 24 chr20 62330282 62330384 -9823498 - MER58 DNA MER1_type -105 110 24 198 33 0 0 chr20 62330408 62330438 -9823444 - L2 LINE L2 -362 2952 2923 * 321 269 13 0 chr20 62330428 62330506 -9823376 - MER5B DNA MER1_type -99 79 1 2055 86 3 73 chr20 62330766 62331130 -9822752 - AluY SINE Alu 0 343 1 2110 134 3 0 chr20 62331135 62331426 -9822456 - AluSx SINE Alu -20 292 1 254 295 32 42 chr20 62331426 62331521 -9822361 - MER58 DNA MER1_type -2311 109 16 246 345 61 20 chr20 62331521 62331669 -9822213 - L2 LINE L2 -349 2965 2812 214 288 25 25 chr20 62333067 62333147 -9820735 + MIR SINE MIR 57 136 -126 280 297 40 10 chr20 62333254 62333355 -9820527 + MIR SINE MIR 80 183 -79 320 188 130 0 chr20 62333570 62333639 -9820243 + MER81 DNA DNA 1 78 -36 284 267 0 0 chr20 62335709 62335769 -9818113 + MLT1H LTR MaLR 231 290 -259 2347 77 0 50 chr20 62335826 62336149 -9817733 + AluY SINE Alu 1 307 -4 2055 215 73 19 chr20 62336922 62337360 -9816522 - L1MC4a LINE L1 -1 7807 7333 3464 103 0 31 chr20 62337360 62337457 -9816425 - LOR1a LTR ERV1 0 497 399 2126 55 12 0 chr20 62337457 62337713 -9816169 - AluY SINE Alu -11 300 42 3464 103 0 31 chr20 62337713 62338127 -9815755 - LOR1a LTR ERV1 -98 399 2 2055 215 73 19 chr20 62338127 62338222 -9815660 - L1MC4a LINE L1 -475 7333 7245 308 291 43 17 chr20 62338303 62338420 -9815462 + MIR SINE MIR 67 186 -76 321 225 56 0 chr20 62338824 62338913 -9814969 + MIR SINE MIR 154 247 -15 557 264 25 12 chr20 62338940 62339103 -9814779 - L2 LINE L2 0 3313 3149 186 324 61 88 chr20 62339452 62339600 -9814282 + L2 LINE L2 3129 3272 0 1526 169 14 37 chr20 62340072 62340368 -9813514 - AluJo SINE Alu -23 289 1 305 315 154 0 chr20 62341306 62341436 -9812446 + L2 LINE L2 3123 3272 0 2227 121 3 0 chr20 62341862 62342160 -9811722 + AluSx SINE Alu 1 299 -13 186 103 0 0 chr20 62342686 62342715 -9811167 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 235 259 17 0 chr20 62343753 62343811 -9810071 - Charlie4 DNA MER1_type -8 1953 1895 2384 98 0 0 chr20 62343826 62344121 -9809761 + AluSg SINE Alu 1 295 -15 478 278 70 67 chr20 62344150 62344248 -9809634 + L2 LINE L2 2985 3081 -232 3198 136 12 4 chr20 62344248 62344740 -9809142 + LOR1a LTR ERV1 1 496 -1 478 278 70 67 chr20 62344740 62344954 -9808928 + L2 LINE L2 3081 3298 -15 43543 33 26 1 chr20 62345107 62351111 -9802771 - L1PA3 LINE L1 0 6155 1 1941 133 0 68 chr20 62351496 62351819 -9802063 + AluSx SINE Alu 3 303 -9 999 169 12 6 chr20 62351820 62351992 -9801890 - MLT1B LTR MaLR -217 173 1 208 335 80 11 chr20 62352396 62352584 -9801298 + MIR SINE MIR 50 250 -12 536 163 32 73 chr20 62352791 62352914 -9800968 + FLAM_C SINE Alu 5 122 -11 684 36 0 0 chr20 62352925 62353008 -9800874 + (GGAA)n Simple_repeat Simple_repeat 4 86 0 589 244 8 0 chr20 62353159 62353278 -9800604 + MER5B DNA MER1_type 1 120 -58 312 167 28 28 chr20 62353350 62353422 -9800460 + MIR SINE MIR 65 136 -126 293 330 64 61 chr20 62353669 62354011 -9799871 - L2 LINE L2 -20 3252 2910 1722 153 10 30 chr20 62354012 62354312 -9799570 - AluJo SINE Alu -18 294 1 916 188 0 12 chr20 62354316 62354476 -9799406 - FRAM SINE Alu -19 157 1 180 0 0 0 chr20 62354814 62354834 -9799048 + (TG)n Simple_repeat Simple_repeat 1 20 0 2096 125 0 0 chr20 62354834 62355115 -9798767 - AluSx SINE Alu -31 281 1 394 263 32 53 chr20 62355138 62355328 -9798554 + MIR SINE MIR 23 208 -54 243 139 0 0 chr20 62355511 62355531 -9798351 + (A)n Simple_repeat Simple_repeat 1 20 -23 2056 113 0 10 chr20 62355531 62355822 -9798060 + AluSg SINE Alu 23 310 0 243 139 0 0 chr20 62355822 62355844 -9798038 + (A)n Simple_repeat Simple_repeat 19 43 0 335 340 14 7 chr20 62356478 62356619 -9797263 + MIR SINE MIR 11 152 -110 430 204 0 11 chr20 62357107 62357200 -9796682 - MIR SINE MIR -108 154 63 204 67 0 0 chr20 62358233 62358263 -9795619 + (A)n Simple_repeat Simple_repeat 1 30 0 381 43 0 0 chr20 62358590 62358637 -9795245 + (TA)n Simple_repeat Simple_repeat 1 47 0 2109 116 14 0 chr20 62358806 62359082 -9794800 + AluSx SINE Alu 1 280 -32 927 118 0 0 chr20 62359082 62359235 -9794647 + (GGAA)n Simple_repeat Simple_repeat 3 155 0 568 191 0 40 chr20 62359239 62359464 -9794418 + GA-rich Low_complexity Low_complexity 1 216 0 240 35 0 0 chr20 62359464 62359493 -9794389 + (CAGG)n Simple_repeat Simple_repeat 2 30 0 2095 120 13 3 chr20 62360078 62360378 -9793504 + AluSx SINE Alu 1 303 -9 224 214 107 0 chr20 62360478 62360534 -9793348 + MIR SINE MIR 93 154 -108 569 330 129 29 chr20 62360858 62361338 -9792544 - L2 LINE L2 -1 3312 2881 2366 97 13 0 chr20 62361338 62361647 -9792235 - AluSp SINE Alu 0 313 1 569 330 129 29 chr20 62361647 62362115 -9791767 - L2 LINE L2 -432 2881 2267 43797 32 22 1 chr20 62362189 62368214 -9785668 + L1PA2 LINE L1 1 6153 -2 1871 199 59 83 chr20 62369421 62369948 -9783934 + MLT2B3 LTR ERVL 1 514 -40 2280 121 0 6 chr20 62369958 62370272 -9783610 + AluSx SINE Alu 1 312 0 1222 141 0 21 chr20 62370272 62370463 -9783419 + AluSq SINE Alu 126 312 -1 290 163 0 0 chr20 62370467 62370516 -9783366 + MLT2A2 LTR ERVL 399 447 -6 707 197 33 13 chr20 62370879 62371031 -9782851 + MER106A DNA MER1_type 1 155 -81 826 142 0 8 chr20 62371040 62371174 -9782708 + FLAM_C SINE Alu 1 133 0 268 197 26 53 chr20 62371226 62371302 -9782580 + MER106A DNA MER1_type 146 219 -17 1623 142 3 71 chr20 62371318 62371613 -9782269 + AluJo SINE Alu 14 288 -24 229 183 0 122 chr20 62371688 62371770 -9782112 - MIR SINE MIR -142 120 49 341 277 21 0 chr20 62371851 62371945 -9781937 + MER5A DNA MER1_type 6 101 -88 563 229 121 0 chr20 62372525 62372691 -9781191 - MER5A DNA MER1_type 0 189 4 228 231 31 15 chr20 62372709 62372774 -9781108 + MER5A DNA MER1_type 10 75 -114 1164 168 18 46 chr20 62372775 62372930 -9780952 + L1MA4 LINE L1 6017 6162 -138 1385 185 75 43 chr20 62372930 62373211 -9780671 - AluJo SINE Alu -22 290 1 1164 168 18 46 chr20 62373211 62373340 -9780542 + L1MA4 LINE L1 6162 6293 -7 245 216 278 10 chr20 62373358 62373455 -9780427 + MER5A DNA MER1_type 61 183 -6 336 246 37 45 chr20 62373467 62373601 -9780281 + MER5B DNA MER1_type 14 146 -32 965 119 0 0 chr20 62373774 62373908 -9779974 + AluSq/x SINE Alu 1 134 -179 213 39 0 0 chr20 62374152 62374178 -9779704 + (TG)n Simple_repeat Simple_repeat 2 27 0 2148 113 17 0 chr20 62374713 62375005 -9778877 - AluSx SINE Alu -15 297 1 2228 115 3 0 chr20 62375013 62375317 -9778565 - AluSc SINE Alu -4 305 1 429 312 19 19 chr20 62375395 62375552 -9778330 - L2 LINE L2 -5 3308 3152 2986 119 46 19 chr20 62375562 62376039 -9777843 + MER1A DNA MER1_type 1 490 -39 809 148 15 15 chr20 62376148 62376283 -9777599 - AluSg/x SINE Alu -14 298 164 205 270 0 27 chr20 62376283 62376357 -9777525 + A-rich Low_complexity Low_complexity 4 75 0 200 236 18 0 chr20 62376407 62376462 -9777420 + A-rich Low_complexity Low_complexity 2 57 0 45 16 0 16 chr20 62376535 62376561 -9777321 + AT_rich Low_complexity Low_complexity 1 26 -36 2401 90 0 3 chr20 62376561 62376871 -9777011 + AluSg SINE Alu 1 309 -1 45 16 0 16 chr20 62376871 62376907 -9776975 + AT_rich Low_complexity Low_complexity 26 62 0 22 0 0 0 chr20 62377155 62377177 -9776705 + AT_rich Low_complexity Low_complexity 1 22 0 1041 215 14 5 chr20 62377223 62377446 -9776436 - MER58B DNA MER1_type 0 341 117 2020 129 7 10 chr20 62377448 62377742 -9776140 - AluSx SINE Alu -19 293 1 1865 161 7 0 chr20 62378426 62378718 -9775164 - AluJb SINE Alu -18 294 1 267 215 15 15 chr20 62378848 62378913 -9774969 + HAL1 LINE L1 2443 2507 0 2356 100 3 0 chr20 62379165 62379465 -9774417 - AluSq SINE Alu -12 301 1 191 61 30 0 chr20 62379468 62379501 -9774381 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 582 234 31 0 chr20 62379509 62379637 -9774245 - MER33 DNA MER1_type -176 148 17 405 290 161 0 chr20 62379664 62379819 -9774063 + MER5A DNA MER1_type 4 183 -6 272 318 16 39 chr20 62379883 62380012 -9773870 - L2 LINE L2 -3 3310 3185 2147 105 10 0 chr20 62380031 62380317 -9773565 + AluSx SINE Alu 2 293 -19 1069 113 11 6 chr20 62380317 62380494 -9773388 + (GGAA)n Simple_repeat Simple_repeat 3 180 0 227 190 69 0 chr20 62380570 62380628 -9773254 + MIR SINE MIR 76 137 -125 1759 140 0 8 chr20 62380722 62380987 -9772895 - AluSx SINE Alu -49 263 1 445 243 38 65 chr20 62381075 62381261 -9772621 - MLT1K LTR MaLR -358 230 87 2272 111 3 0 chr20 62381365 62381663 -9772219 + AluSq SINE Alu 1 299 -14 2129 125 0 16 chr20 62381781 62382086 -9771796 + AluSx SINE Alu 1 300 -12 3183 56 7 2 chr20 62382086 62382494 -9771388 + L1PA8 LINE L1 5757 6166 -6 266 321 27 9 chr20 62382505 62382617 -9771265 + L1ME LINE L1 5606 5719 -451 1380 257 86 20 chr20 62383236 62383691 -9770191 + MLT1H1 LTR MaLR 3 487 -68 26 64 0 0 chr20 62383703 62383750 -9770132 + AT_rich Low_complexity Low_complexity 1 47 0 228 213 66 0 chr20 62383880 62383941 -9769941 + MLT1H1 LTR MaLR 477 541 -8 266 203 29 29 chr20 62384066 62384104 -9769778 + CT-rich Low_complexity Low_complexity 5 45 -28 2466 52 3 0 chr20 62384104 62384411 -9769471 - AluY SINE Alu -3 308 1 266 203 29 29 chr20 62384411 62384441 -9769441 + CT-rich Low_complexity Low_complexity 44 73 0 325 355 58 26 chr20 62384443 62384598 -9769284 - L2 LINE L2 -1 3271 3112 25 0 0 0 chr20 62384632 62384657 -9769225 + AT_rich Low_complexity Low_complexity 1 25 0 446 238 9 0 chr20 62384667 62384772 -9769110 - MIR SINE MIR -54 208 103 1515 137 99 0 chr20 62384794 62385056 -9768826 + AluJo SINE Alu 12 299 -13 216 292 44 35 chr20 62385084 62385197 -9768685 - L2 LINE L2 -946 2368 2255 1197 184 13 0 chr20 62385220 62385448 -9768434 + L1MB3 LINE L1 5943 6173 -10 225 246 0 49 chr20 62385448 62385509 -9768373 + Charlie8 DNA MER1_type 111 168 -2249 1963 131 27 0 chr20 62386209 62386507 -9767375 - AluSc SINE Alu -3 306 1 2088 123 0 0 chr20 62386513 62386805 -9767077 - AluSx SINE Alu -20 292 1 21 0 0 0 chr20 62386807 62386828 -9767054 + AT_rich Low_complexity Low_complexity 1 21 0 1215 196 127 73 chr20 62386892 62386939 -9766943 - MLT1C LTR MaLR -3 464 421 1779 152 0 7 chr20 62386939 62387242 -9766640 - AluJo SINE Alu -11 301 1 1215 196 127 73 chr20 62387242 62387634 -9766248 - MLT1C LTR MaLR -46 421 1 1996 128 13 16 chr20 62387861 62388173 -9765709 + AluSx SINE Alu 1 311 -1 201 143 0 0 chr20 62388191 62388219 -9765663 + MER91B DNA MER1_type 32 59 -131 426 320 8 0 chr20 62388286 62388411 -9765471 + MIR SINE MIR 23 148 -114 266 266 223 0 chr20 62388447 62388541 -9765341 + MIR SINE MIR 137 251 -11 207 0 0 0 chr20 62388702 62388725 -9765157 + (A)n Simple_repeat Simple_repeat 1 23 0 1914 143 37 23 chr20 62388738 62389088 -9764794 + THE1A LTR MaLR 1 355 0 459 0 0 0 chr20 62389200 62389251 -9764631 + (CA)n Simple_repeat Simple_repeat 1 51 0 544 246 28 11 chr20 62389320 62389468 -9764414 - MIR3 SINE MIR -49 159 6 2032 116 7 0 chr20 62389527 62389820 -9764062 + AluSx SINE Alu 1 295 -17 1003 185 95 0 chr20 62389908 62390108 -9763774 + MER20 DNA MER1_type 1 219 0 541 175 19 0 chr20 62390118 62390221 -9763661 + MER5A DNA MER1_type 4 108 -81 462 242 0 91 chr20 62390313 62390445 -9763437 + MER5B DNA MER1_type 1 120 -58 1089 76 0 0 chr20 62390447 62390591 -9763291 - AluSg/x SINE Alu -13 297 154 775 135 0 24 chr20 62390592 62390718 -9763164 + FLAM_A SINE Alu 14 136 -6 1311 266 27 7 chr20 62390719 62391122 -9762760 - Charlie4a DNA MER1_type -81 427 17 2000 131 0 3 chr20 62391240 62391538 -9762344 + AluY SINE Alu 1 297 -14 1778 162 0 10 chr20 62391551 62391854 -9762028 + AluJo SINE Alu 1 300 -12 251 163 87 120 chr20 62391872 62391964 -9761918 + MLT1F1 LTR MaLR 21 109 -458 420 230 22 7 chr20 62391974 62392109 -9761773 + CT-rich Low_complexity Low_complexity 1 137 0 1904 152 0 3 chr20 62392109 62392411 -9761471 - AluSx SINE Alu -10 302 2 338 274 0 0 chr20 62392412 62392485 -9761397 + MLT1F1 LTR MaLR 98 170 -397 237 163 125 113 chr20 62392566 62392646 -9761236 + MLT1H LTR MaLR 423 503 -46 221 340 30 20 chr20 62392646 62392746 -9761136 - L2 LINE L2 -203 3069 2969 21 0 0 0 chr20 62393098 62393119 -9760763 + AT_rich Low_complexity Low_complexity 1 21 0 896 310 34 8 chr20 62393458 62393726 -9760156 + MLT1K LTR MaLR 10 284 -304 2198 117 0 0 chr20 62393741 62394050 -9759832 - AluSx SINE Alu -3 309 1 688 207 138 35 chr20 62394182 62394385 -9759497 + MER58A DNA MER1_type 1 224 0 1846 136 3 22 chr20 62394789 62395134 -9758748 + AluJb SINE Alu 1 339 0 2141 116 0 3 chr20 62395233 62395527 -9758355 + AluSx SINE Alu 1 293 -19 819 273 38 0 chr20 62395605 62395814 -9758068 - MIR SINE MIR 0 262 46 2297 84 0 0 chr20 62395903 62396199 -9757683 - AluSg SINE Alu -14 296 1 2140 104 0 10 chr20 62396384 62396682 -9757200 + AluSx SINE Alu 1 295 -17 377 148 49 37 chr20 62397254 62397335 -9756547 + MER96B DNA MER1_type? 24 105 -312 1412 170 50 36 chr20 62397335 62397612 -9756270 - AluJb SINE Alu -14 298 18 392 107 0 27 chr20 62397612 62397687 -9756195 - MER96B DNA MER1_type? -102 315 243 187 279 73 0 chr20 62398049 62398117 -9755765 - L2 LINE L2 0 3313 3241 2132 114 0 0 chr20 62398297 62398586 -9755296 - AluSx SINE Alu -23 289 1 699 229 13 19 chr20 62398725 62398882 -9755000 + FAM SINE Alu 1 156 -19 1869 140 3 3 chr20 62398907 62399221 -9754661 + AluSx SINE Alu 1 312 0 1608 182 3 0 chr20 62399231 62399517 -9754365 + AluJb SINE Alu 3 289 -23 2087 101 14 7 chr20 62399527 62399824 -9754058 - AluY SINE Alu -12 299 1 1854 110 9 52 chr20 62399851 62400178 -9753704 + AluSq SINE Alu 1 313 0 26 0 0 0 chr20 62400389 62400415 -9753467 + AT_rich Low_complexity Low_complexity 1 26 0 2106 78 50 0 chr20 62400416 62400698 -9753184 + AluSx SINE Alu 1 296 -16 1553 226 9 3 chr20 62401020 62401243 -9752639 - MER58B DNA MER1_type -2079 341 114 2199 112 0 10 chr20 62401243 62401555 -9752327 - AluSx SINE Alu -3 309 1 1553 226 9 3 chr20 62401555 62401659 -9752223 - MER58B DNA MER1_type -2306 114 12 1992 103 7 4 chr20 62401757 62402060 -9751822 + AluSq SINE Alu 4 307 0 194 312 14 109 chr20 62402251 62402323 -9751559 - MIR SINE MIR -4 258 204 1823 151 3 13 chr20 62402323 62402621 -9751261 + AluJb SINE Alu 2 296 -16 194 312 14 109 chr20 62402621 62402686 -9751196 - MIR SINE MIR -58 204 134 1104 186 43 0 chr20 62402739 62402949 -9750933 - MER20 DNA MER1_type 0 219 1 777 83 18 0 chr20 62402954 62403063 -9750819 + HY1 scRNA scRNA 1 111 -1 28 29 0 0 chr20 62403067 62403102 -9750780 + AT_rich Low_complexity Low_complexity 1 35 0 2278 68 0 0 chr20 62403147 62403427 -9750455 + AluSc SINE Alu 5 284 -25 255 103 0 0 chr20 62403433 62403472 -9750410 + (TG)n Simple_repeat Simple_repeat 2 40 0 254 124 80 9 chr20 62403463 62403576 -9750306 + (TA)n Simple_repeat Simple_repeat 1 121 0 * 494 266 55 29 chr20 62403798 62404106 -9749776 + L1ME4a LINE L1 5602 5917 -204 2076 104 10 0 chr20 62404107 62404404 -9749478 + AluSq SINE Alu 1 300 -13 2035 122 14 0 chr20 62404481 62404776 -9749106 + AluSx SINE Alu 1 299 -13 401 274 105 0 chr20 62404965 62405089 -9748793 + MIR SINE MIR 123 259 -3 1454 204 4 0 chr20 62405547 62405866 -9748016 - AluJo SINE Alu 0 320 1 2201 76 3 0 chr20 62406533 62406814 -9747068 + AluY SINE Alu 1 285 -26 246 32 0 0 chr20 62406814 62406845 -9747037 + (TTAA)n Simple_repeat Simple_repeat 3 33 0 1674 180 0 3 chr20 62407155 62407475 -9746407 + AluJb SINE Alu 1 319 0 1565 196 7 3 chr20 62407516 62407817 -9746065 + AluJo SINE Alu 1 302 -10 2534 172 46 50 chr20 62407914 62408080 -9745802 + L1MB5 LINE L1 5614 5779 -395 2451 122 48 31 chr20 62408080 62408119 -9745763 - MSTA LTR MaLR 0 428 391 2231 92 3 0 chr20 62408119 62408423 -9745459 + AluSg SINE Alu 1 305 -5 2451 122 48 31 chr20 62408423 62408802 -9745080 - MSTA LTR MaLR -37 391 3 2534 172 46 50 chr20 62408802 62408906 -9744976 + L1MB5 LINE L1 5779 5882 -292 1660 142 7 45 chr20 62408906 62409216 -9744666 + AluJb SINE Alu 1 298 -14 2534 172 46 50 chr20 62409216 62409490 -9744392 + L1MB5 LINE L1 5882 6157 -17 369 0 0 0 chr20 62409698 62409739 -9744143 + (TG)n Simple_repeat Simple_repeat 2 42 0 1209 106 4 2 chr20 62409740 62409976 -9743906 - AluSp SINE Alu -33 280 2 441 286 34 51 chr20 62409976 62410065 -9743817 + MIR SINE MIR 70 156 -106 1752 159 0 3 chr20 62410065 62410354 -9743528 - AluJo SINE Alu -1 311 24 441 286 34 51 chr20 62410354 62410439 -9743443 + MIR SINE MIR 156 241 -21 354 23 0 0 chr20 62410499 62410542 -9743340 + (CA)n Simple_repeat Simple_repeat 2 44 0 317 294 28 28 chr20 62410542 62410642 -9743240 + MIR SINE MIR 26 128 -134 2295 88 0 0 chr20 62410754 62411051 -9742831 + AluSx SINE Alu 6 302 -10 1773 183 85 51 chr20 62411202 62411651 -9742231 + L1MD3 LINE L1 7510 7973 -22 1903 121 13 16 chr20 62411651 62411958 -9741924 + AluSx SINE Alu 1 306 -6 2075 88 22 0 chr20 62411983 62412257 -9741625 + AluSg SINE Alu 1 280 -30 2161 101 0 0 chr20 62412712 62413010 -9740872 - AluSq SINE Alu -15 298 1 2270 86 7 0 chr20 62413066 62413367 -9740515 - AluSc SINE Alu -6 303 1 253 312 71 92 chr20 62413508 62413790 -9740092 - L2 LINE L2 -5 3267 2992 1835 93 8 0 chr20 62413834 62414080 -9739802 + AluSx SINE Alu 53 300 -12 2203 101 0 0 chr20 62414469 62414766 -9739116 - AluSq SINE Alu -16 297 1 1808 160 0 10 chr20 62414955 62415255 -9738627 - AluJb SINE Alu -15 297 1 244 268 28 0 chr20 62415713 62415784 -9738098 + L2 LINE L2 2708 2780 -534 1894 144 3 7 chr20 62415789 62416087 -9737795 + AluSx SINE Alu 1 297 -15 1987 96 3 7 chr20 62416089 62416423 -9737459 + AluSg1 SINE Alu 1 333 0 1843 132 13 41 chr20 62416427 62416745 -9737137 + AluSx SINE Alu 1 309 -3 1432 164 26 61 chr20 62416828 62417138 -9736744 + AluJo SINE Alu 1 299 -13 389 300 0 0 chr20 62417149 62417239 -9736643 - L1MC4 LINE L1 -1339 6703 6614 380 258 0 43 chr20 62417161 62417254 -9736628 + L1MC4 LINE L1 6614 6702 -1340 * 1070 288 65 13 chr20 62417259 62417644 -9736238 - L1ME3A LINE L1 -24 6146 5742 892 132 0 0 chr20 62417669 62417798 -9736084 - FLAM_C SINE Alu -2 131 3 2068 132 3 0 chr20 62417942 62418253 -9735629 + AluSx SINE Alu 1 312 0 2272 98 3 0 chr20 62418407 62418714 -9735168 - AluSp SINE Alu -5 308 1 1944 104 0 4 chr20 62419108 62419378 -9734504 + AluSx SINE Alu 1 269 -43 442 136 0 23 chr20 62419398 62419486 -9734396 + (GGAA)n Simple_repeat Simple_repeat 3 88 0 29 47 0 0 chr20 62419616 62419659 -9734223 + AT_rich Low_complexity Low_complexity 1 43 0 887 139 63 112 chr20 62420091 62420162 -9733720 + AluJo SINE Alu 85 158 -154 1744 132 56 7 chr20 62420162 62420449 -9733433 + AluSx SINE Alu 1 301 -11 887 139 63 112 chr20 62420449 62420600 -9733282 + AluJo SINE Alu 158 296 -16 1596 141 0 52 chr20 62420625 62420915 -9732967 - AluJo SINE Alu -37 275 1 829 120 0 0 chr20 62420915 62421040 -9732842 - AluJo SINE Alu -177 135 11 2017 114 30 0 chr20 62421056 62421355 -9732527 - AluSx SINE Alu -4 308 1 291 208 104 0 chr20 62421357 62421463 -9732419 + Charlie1 DNA MER1_type 2563 2679 -82 2547 48 0 3 chr20 62421463 62421774 -9732108 - AluY SINE Alu -1 310 1 579 66 0 0 chr20 62421945 62422021 -9731861 + (TCCCC)n Simple_repeat Simple_repeat 1 76 0 1868 147 0 0 chr20 62422027 62422319 -9731563 - AluSx SINE Alu -20 292 1 253 258 32 129 chr20 62422368 62422492 -9731390 + L2 LINE L2 3160 3271 -1 21 0 0 0 chr20 62422577 62422598 -9731284 + AT_rich Low_complexity Low_complexity 1 21 0 369 0 0 0 chr20 62422611 62422652 -9731230 + (TG)n Simple_repeat Simple_repeat 1 41 0 322 266 55 18 chr20 62422704 62422813 -9731069 + L1MC5 LINE L1 5897 6009 -1799 2081 114 3 0 chr20 62422818 62423108 -9730774 + AluSx SINE Alu 1 291 -21 2071 106 0 7 chr20 62423135 62423428 -9730454 + AluY SINE Alu 1 291 -20 796 261 72 90 chr20 62423558 62423783 -9730099 + L1MC5 LINE L1 6562 6789 -1172 1432 117 26 126 chr20 62423783 62424124 -9729758 - AluYb8 SINE Alu -11 307 1 796 261 72 90 chr20 62424124 62424483 -9729399 + L1MC5 LINE L1 6789 7148 -813 2160 119 0 0 chr20 62424554 62424866 -9729016 + AluSx SINE Alu 1 312 0 2010 124 0 3 chr20 62424876 62425167 -9728715 - AluSx SINE Alu -11 301 12 841 140 0 7 chr20 62425213 62425356 -9728526 + FRAM SINE Alu 1 40 0 25 0 0 0 chr20 62426165 62426190 -9727692 + AT_rich Low_complexity Low_complexity 1 25 0 2157 90 10 7 chr20 62427724 62428023 -9725859 - AluSx SINE Alu -12 300 1 697 122 157 0 chr20 62428178 62428293 -9725589 + FRAM SINE Alu 26 158 -18 207 257 128 37 chr20 62429153 62429262 -9724620 + MIR SINE MIR 21 139 -123 872 206 25 0 chr20 62429286 62429446 -9724436 - MER58B DNA MER1_type -3 338 175 265 268 37 37 chr20 62429504 62429586 -9724296 + MIR SINE MIR 180 261 -1 1580 113 8 23 chr20 62429753 62430009 -9723873 - AluSx SINE Alu -23 289 38 1254 136 4 40 chr20 62430547 62430775 -9723107 + AluJb SINE Alu 85 304 -8 525 146 0 154 chr20 62431318 62431441 -9722441 + MER2 DNA MER2_type 1 104 -241 1503 89 9 9 chr20 62431465 62431678 -9722204 - AluSp SINE Alu -15 298 86 326 91 0 0 chr20 62431680 62431724 -9722158 - AluSp SINE Alu -264 44 1 1626 168 0 14 chr20 62431782 62432097 -9721785 - AluSx SINE Alu 0 312 2 1348 122 4 63 chr20 62432098 62432129 -9721753 + MER2 DNA MER2_type 121 152 -193 1979 133 3 0 chr20 62432129 62432423 -9721459 + AluSx SINE Alu 2 296 -16 1348 122 4 63 chr20 62432423 62432628 -9721254 + MER2 DNA MER2_type 152 343 -2 222 371 48 9 chr20 62432719 62432824 -9721058 - L2 LINE L2 -21 3251 3143 2253 96 3 0 chr20 62432852 62433164 -9720718 + AluSq SINE Alu 1 313 0 766 178 8 0 chr20 62433402 62433531 -9720351 + FLAM_C SINE Alu 2 131 -12 1225 219 42 11 chr20 62433539 62433822 -9720060 + AluJo SINE Alu 1 292 -20 369 232 33 127 chr20 62433828 62434009 -9719873 - MER106B DNA MER1_type -895 164 1 570 224 40 20 chr20 62435836 62435988 -9717894 - MIR SINE MIR -67 195 41 2205 93 0 50 chr20 62436155 62436477 -9717405 + AluSx SINE Alu 3 308 -4 245 296 20 20 chr20 62438135 62438233 -9715649 - MIR SINE MIR -119 143 46 962 163 42 28 chr20 62439265 62439480 -9714402 - MER20 DNA MER1_type -1 218 1 23 0 0 0 chr20 62439545 62439568 -9714314 + AT_rich Low_complexity Low_complexity 1 23 0 317 323 79 0 chr20 62439577 62439704 -9714178 - MIR3 SINE MIR -42 166 30 197 239 65 0 chr20 62443156 62443202 -9710680 - L2 LINE L2 0 3272 3224 207 0 0 0 chr20 62443435 62443458 -9710424 + (A)n Simple_repeat Simple_repeat 1 23 0 1668 151 60 21 chr20 62443617 62443902 -9709980 + AluSx SINE Alu 1 296 -16 393 225 70 42 chr20 62444436 62444578 -9709304 + L2 LINE L2 3165 3310 -3 23 0 0 0 chr20 62446217 62446240 -9707642 + AT_rich Low_complexity Low_complexity 1 23 0 303 104 0 0 chr20 62446918 62446966 -9706916 + (TA)n Simple_repeat Simple_repeat 1 48 0 237 65 0 0 chr20 62451176 62451207 -9702675 + (A)n Simple_repeat Simple_repeat 1 31 0 40 73 0 0 chr20 62452008 62452090 -9701792 + GC_rich Low_complexity Low_complexity 1 82 0 239 268 0 0 chr20 62452179 62452235 -9701647 + G-rich Low_complexity Low_complexity 101 156 0 280 250 6 67 chr20 62452624 62452804 -9701078 + C-rich Low_complexity Low_complexity 1 169 0 21 0 0 0 chr20 62452932 62452953 -9700929 + GC_rich Low_complexity Low_complexity 1 21 0 183 129 0 0 chr20 62453374 62453405 -9700477 + (A)n Simple_repeat Simple_repeat 1 31 0 249 33 0 0 chr20 62455423 62455453 -9698429 + (A)n Simple_repeat Simple_repeat 1 30 0 225 65 0 0 chr20 62455928 62455959 -9697923 + (TA)n Simple_repeat Simple_repeat 1 31 0 523 296 126 0 chr20 62456630 62456900 -9696982 - L2 LINE L2 -1014 2300 1997 317 306 9 28 chr20 62457374 62457482 -9696400 + MIR SINE MIR 47 152 -110 318 339 108 27 chr20 62457610 62457943 -9695939 - L2 LINE L2 -42 3230 2871 505 304 137 22 chr20 62458038 62458396 -9695486 + L2 LINE L2 1922 2320 -994 1406 167 41 30 chr20 62458584 62458905 -9694977 + AluJb SINE Alu 11 334 0 189 300 17 0 chr20 62458925 62458985 -9694897 - L2 LINE L2 -508 2806 2746 449 243 22 29 chr20 62458985 62459121 -9694761 - HAL1b LINE L1 -279 1069 935 680 103 0 3 chr20 62459124 62459357 -9694525 + AluSg SINE Alu 2 312 0 222 255 0 0 chr20 62459357 62459408 -9694474 - MIR SINE MIR -138 124 74 2547 80 0 3 chr20 62459760 62460074 -9693808 - AluSq SINE Alu 0 313 1 1572 157 37 53 chr20 62460096 62460236 -9693646 + AluJb SINE Alu 3 144 -168 2288 71 14 7 chr20 62460236 62460532 -9693350 + AluY SINE Alu 1 298 -13 1572 157 37 53 chr20 62460532 62460690 -9693192 + AluJb SINE Alu 144 296 -16 331 269 26 58 chr20 62461148 62461304 -9692578 - L2 LINE L2 -4 3309 3159 301 277 91 0 chr20 62461322 62461455 -9692427 + L1MC/D LINE L1 5642 5789 -373 2360 81 0 7 chr20 62461485 62461781 -9692101 + AluSg SINE Alu 1 294 -16 2163 83 43 0 chr20 62461797 62462075 -9691807 + AluSx SINE Alu 1 290 -22 1934 99 75 14 chr20 62462487 62462769 -9691113 - AluSx SINE Alu -13 299 1 2256 102 0 3 chr20 62462777 62463081 -9690801 - AluSq SINE Alu -10 303 1 1050 286 107 12 chr20 62463132 62463645 -9690237 - L2 LINE L2 -22 3291 2729 1935 108 17 37 chr20 62463837 62464133 -9689749 + AluSq SINE Alu 13 302 -11 964 152 73 0 chr20 62464136 62464300 -9689582 + AluJb SINE Alu 137 312 0 1878 129 14 0 chr20 62464360 62464638 -9689244 + AluSx SINE Alu 31 312 0 229 270 130 74 chr20 62464645 62464860 -9689022 - MIR SINE MIR -13 249 23 225 311 54 27 chr20 62465054 62465202 -9688680 + MIR SINE MIR 10 161 -101 1480 141 104 54 chr20 62465204 62465501 -9688381 + AluJo SINE Alu 1 312 0 2411 77 0 0 chr20 62465508 62465805 -9688077 + AluY SINE Alu 1 297 -14 216 0 0 0 chr20 62465805 62465829 -9688053 + (TA)n Simple_repeat Simple_repeat 2 25 0 1120 74 0 0 chr20 62465829 62465964 -9687918 + AluSq/x SINE Alu 2 136 -176 25 0 0 0 chr20 62465990 62466015 -9687867 + AT_rich Low_complexity Low_complexity 1 25 0 1783 77 104 23 chr20 62466015 62466274 -9687608 + AluSx SINE Alu 1 280 -32 51 0 0 0 chr20 62466280 62466331 -9687551 + AT_rich Low_complexity Low_complexity 1 51 0 181 275 233 11 chr20 62467071 62467260 -9686622 + MIR SINE MIR 21 251 -11 570 274 58 73 chr20 62468403 62468816 -9685066 + L1ME4a LINE L1 5518 5924 -197 348 260 67 109 chr20 62468832 62469105 -9684777 + L1MC5 LINE L1 7570 7826 -135 2564 78 0 0 chr20 62469105 62469414 -9684468 + AluY SINE Alu 3 311 0 348 260 67 109 chr20 62469414 62469498 -9684384 + L1MC5 LINE L1 7826 7912 -49 23 0 0 0 chr20 62469547 62469570 -9684312 + AT_rich Low_complexity Low_complexity 1 23 0 198 0 0 0 chr20 62469920 62469942 -9683940 + (CA)n Simple_repeat Simple_repeat 2 23 0 279 214 0 0 chr20 62470210 62470280 -9683602 + T-rich Low_complexity Low_complexity 5 74 0 618 93 0 35 chr20 62470421 62470507 -9683375 + AluJo/FLAM SINE Alu 36 118 -194 2131 131 0 16 chr20 62470507 62470819 -9683063 - AluSx SINE Alu -2 310 4 2277 71 24 14 chr20 62471194 62471491 -9682391 + AluSx SINE Alu 1 300 -12 237 183 0 0 chr20 62472594 62472654 -9681228 + A-rich Low_complexity Low_complexity 1 60 0 2380 103 0 0 chr20 62472929 62473230 -9680652 - AluSg1 SINE Alu -8 301 1 2197 102 3 13 chr20 62473270 62473584 -9680298 - AluY SINE Alu 0 311 1 2263 117 0 10 chr20 62473584 62473893 -9679989 - AluSx SINE Alu -6 306 1 916 201 0 0 chr20 62473948 62474112 -9679770 + FRAM SINE Alu 1 161 -15 1012 160 0 6 chr20 62474237 62474393 -9679489 + FRAM SINE Alu 1 146 -30 395 155 0 64 chr20 62474426 62474520 -9679362 - AluJ/FRAM SINE Alu 0 302 228 254 161 0 129 chr20 62474501 62474547 -9679335 - AluY SINE Alu -130 171 133 * 2167 115 10 0 chr20 62474547 62474842 -9679040 - AluSx SINE Alu -14 298 1 254 161 0 129 chr20 62474842 62474857 -9679025 - AluY SINE Alu -168 133 118 2071 125 3 14 chr20 62474881 62475176 -9678706 + AluSq SINE Alu 1 292 -21 2320 84 0 7 chr20 62475337 62475635 -9678247 - AluY SINE Alu -15 296 1 2189 113 7 0 chr20 62475835 62476144 -9677738 + AluY SINE Alu 1 311 0 2381 112 0 3 chr20 62476735 62477049 -9676833 - AluSq SINE Alu 0 313 1 1872 124 0 53 chr20 62477178 62477502 -9676380 + AluSx SINE Alu 1 308 0 2232 85 3 0 chr20 62477502 62477807 -9676075 + AluY SINE Alu 1 306 0 2634 52 0 0 chr20 62478486 62478793 -9675089 - AluY SINE Alu -4 307 1 2373 96 0 13 chr20 62478839 62479152 -9674730 - AluSg SINE Alu -1 309 1 26 0 0 0 chr20 62479152 62479178 -9674704 + AT_rich Low_complexity Low_complexity 1 26 0 1725 124 20 4 chr20 62479178 62479427 -9674455 - AluSq SINE Alu -60 253 1 2289 100 3 3 chr20 62479431 62479731 -9674151 - AluSx SINE Alu -12 300 1 292 314 42 0 chr20 62480898 62481046 -9672836 - MIR SINE MIR -10 198 39 21 0 0 0 chr20 62481534 62481555 -9672327 + AT_rich Low_complexity Low_complexity 1 21 0 735 219 82 6 chr20 62482142 62482358 -9671524 - MIR SINE MIR 0 262 33 2386 84 0 40 chr20 62482833 62482980 -9670902 - AluSq SINE Alu -5 308 157 2240 86 7 10 chr20 62482980 62483282 -9670600 + AluSg SINE Alu 1 301 -9 2386 84 0 40 chr20 62483282 62483455 -9670427 - AluSq SINE Alu -156 157 1 22 0 0 0 chr20 62483885 62483907 -9669975 + AT_rich Low_complexity Low_complexity 1 22 0 2310 102 0 0 chr20 62483910 62484204 -9669678 - AluSg SINE Alu -16 294 1 1701 155 3 37 chr20 62484591 62484881 -9669001 + AluJo SINE Alu 1 282 -30 208 0 0 0 chr20 62484881 62484904 -9668978 + (TAAA)n Simple_repeat Simple_repeat 1 68 0 776 178 0 0 chr20 62485116 62485234 -9668648 + AluJo/FLAM SINE Alu 1 118 -184 1070 102 36 30 chr20 62485234 62485400 -9668482 - BC200 scRNA scRNA -33 167 1 2144 104 32 19 chr20 62485464 62485772 -9668110 + AluSq SINE Alu 1 312 -1 2253 62 3 34 chr20 62485862 62486178 -9667704 + AluY SINE Alu 1 307 0 811 205 14 104 chr20 62486196 62486484 -9667398 - ORSL DNA AcHobo -4 271 10 1909 148 26 23 chr20 62486621 62486931 -9666951 + AluSx SINE Alu 1 311 -1 2409 82 7 7 chr20 62486982 62487286 -9666596 - AluSx SINE Alu -8 304 1 318 310 85 40 chr20 62487287 62487487 -9666395 - L2 LINE L2 -340 2974 2766 2549 71 3 0 chr20 62487575 62487883 -9665999 - AluSp SINE Alu -4 309 1 1058 215 0 0 chr20 62487885 62488080 -9665802 - AluJb SINE Alu 0 312 118 771 196 0 26 chr20 62488436 62488589 -9665293 + MER2 DNA MER2_type 1 149 -196 2534 73 3 0 chr20 62488595 62488897 -9664985 - AluSg SINE Alu -7 303 1 2419 101 0 0 chr20 62488899 62489205 -9664677 - AluSg SINE Alu -2 308 3 2569 72 0 0 chr20 62489212 62489519 -9664363 - AluY SINE Alu -4 307 1 806 206 0 0 chr20 62489556 62489692 -9664190 + FRAM SINE Alu 9 144 -32 2068 95 37 4 chr20 62489692 62490015 -9663867 - AluSx SINE Alu 0 332 1 638 177 0 40 chr20 62490048 62490172 -9663710 + FLAM_C SINE Alu 4 122 -21 262 231 0 0 chr20 62490200 62490252 -9663630 + AluSc SINE Alu 233 284 -15 314 237 91 101 chr20 62490520 62490718 -9663164 - L2 LINE L2 -3 3310 3115 1278 163 0 140 chr20 62490719 62490881 -9663001 + AluJo SINE Alu 1 184 -128 2361 109 0 0 chr20 62490881 62491194 -9662688 + AluSp SINE Alu 1 313 0 1278 163 0 140 chr20 62491194 62491205 -9662677 + AluJo SINE Alu 184 195 -117 2235 102 7 3 chr20 62491205 62491500 -9662382 + AluSx SINE Alu 1 296 -16 1278 163 0 140 chr20 62491500 62491632 -9662250 + AluJo SINE Alu 195 264 -48 180 0 0 0 chr20 62491632 62491652 -9662230 + (GA)n Simple_repeat Simple_repeat 1 20 0 2711 33 0 0 chr20 62491662 62491961 -9661921 + AluY SINE Alu 1 299 -12 381 213 38 0 chr20 62491965 62492045 -9661837 - MER3 DNA MER1_type -126 83 1 456 19 0 0 chr20 62492076 62492129 -9661753 + (TAGA)n Simple_repeat Simple_repeat 1 53 0 2201 118 0 0 chr20 62492129 62492426 -9661456 - AluSx SINE Alu -15 297 1 643 164 0 0 chr20 62492429 62492533 -9661349 - FLAM_C SINE Alu -7 136 33 632 250 28 11 chr20 62492534 62492710 -9661172 - L1MC5 LINE L1 -480 7481 7303 317 360 67 36 chr20 62492897 62493023 -9660859 - MIR SINE MIR 0 262 124 2132 106 3 3 chr20 62493023 62493354 -9660528 - AluSx SINE Alu 0 331 1 317 360 67 36 chr20 62493354 62493451 -9660431 - MIR SINE MIR -138 124 31 224 255 0 94 chr20 62493449 62493555 -9660327 - MER5A DNA MER1_type -78 111 16 * 370 228 74 104 chr20 62493844 62494046 -9659836 - L2 LINE L2 -3 3310 3115 1409 165 0 96 chr20 62494047 62494175 -9659707 + AluJo SINE Alu 1 85 -227 2242 109 3 0 chr20 62494175 62494468 -9659414 - AluSq SINE Alu -19 294 1 1409 165 0 96 chr20 62494468 62494642 -9659240 + AluJo SINE Alu 85 274 -38 738 76 25 8 chr20 62494648 62494767 -9659115 + (GGAA)n Simple_repeat Simple_repeat 4 124 0 474 192 15 8 chr20 62494778 62494843 -9659039 + GA-rich Low_complexity Low_complexity 3 66 -67 1819 199 0 6 chr20 62494843 62495154 -9658728 + AluJo SINE Alu 1 309 -3 474 192 15 8 chr20 62495154 62495218 -9658664 + GA-rich Low_complexity Low_complexity 66 133 0 614 13 13 0 chr20 62495219 62495294 -9658588 + (GGAAA)n Simple_repeat Simple_repeat 5 80 0 1323 188 29 48 chr20 62495372 62495545 -9658337 + MER58B DNA MER1_type 3 169 -2251 2345 101 7 0 chr20 62495545 62495852 -9658030 - AluSx SINE Alu -1 311 3 1323 188 29 48 chr20 62495852 62495992 -9657890 + MER58B DNA MER1_type 169 310 -31 2091 120 0 3 chr20 62495992 62496300 -9657582 - AluSq SINE Alu 0 307 1 1793 261 137 38 chr20 62496339 62496580 -9657302 - L2 LINE L2 -280 3033 2817 333 0 0 0 chr20 62496580 62496617 -9657265 + (TG)n Simple_repeat Simple_repeat 1 37 0 1760 187 0 0 chr20 62496624 62496902 -9656980 - AluJo SINE Alu -30 282 5 1793 261 137 38 chr20 62496902 62496982 -9656900 - L2 LINE L2 -501 2812 2741 2101 127 28 0 chr20 62496982 62497273 -9656609 + AluSx SINE Alu 1 299 -13 1793 261 137 38 chr20 62497273 62497766 -9656116 - L2 LINE L2 -572 2741 2147 522 301 175 46 chr20 62497759 62498283 -9655599 + L2 LINE L2 2702 3313 0 * 338 146 0 0 chr20 62498727 62498775 -9655107 - AluS SINE Alu -21 280 233 219 146 0 0 chr20 62549054 62549095 -9604787 + (GA)n Simple_repeat Simple_repeat 2 42 0 2035 96 15 0 chr20 62549416 62549688 -9604194 - AluSx SINE Alu -26 286 11 2144 103 0 13 chr20 62549933 62550233 -9603649 - AluSg SINE Alu -14 296 1 1926 122 11 0 chr20 62550471 62550758 -9603124 + AluSx SINE Alu 1 290 -22 212 0 36 0 chr20 62550762 62550790 -9603092 + (CAA)n Simple_repeat Simple_repeat 2 30 0 207 0 0 0 chr20 62552231 62552254 -9601628 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 2358 74 0 0 chr20 62552585 62552882 -9601000 - AluSc SINE Alu -12 297 1 2092 102 0 3 chr20 62552958 62553253 -9600629 - AluSp SINE Alu -19 294 1 710 115 66 8 chr20 62553276 62553398 -9600484 - L1PB2 LINE L1 -3 6148 6020 1957 103 27 3 chr20 62553410 62553702 -9600180 - AluSx SINE Alu -13 299 1 356 219 10 122 chr20 62553711 62553847 -9600035 + MER104 DNA Tc2 4 113 -1785 737 188 0 30 chr20 62553847 62553980 -9599902 + FLAM_C SINE Alu 3 131 -2 356 219 10 122 chr20 62553980 62554039 -9599843 + MER104 DNA Tc2 113 177 -3 2153 113 0 0 chr20 62554222 62554532 -9599350 + AluY SINE Alu 1 310 -1 2141 91 3 7 chr20 62554545 62554841 -9599041 + AluSx SINE Alu 1 295 -17 186 211 18 70 chr20 62554841 62554898 -9598984 - MIR SINE MIR -99 163 110 280 159 14 14 chr20 62554930 62554990 -9598892 - MER96B DNA MER1_type? -231 186 124 2037 124 0 7 chr20 62554990 62555297 -9598585 - AluSg SINE Alu -5 305 1 2041 136 0 0 chr20 62555305 62555607 -9598275 - AluSx SINE Alu -10 302 1 1096 127 0 0 chr20 62555612 62555770 -9598112 - AluSg/x SINE Alu -21 289 132 2303 81 3 0 chr20 62555770 62556068 -9597814 - AluSp SINE Alu -14 299 1 1487 133 38 110 chr20 62556086 62556403 -9597479 + AluJo SINE Alu 1 294 -8 265 221 67 87 chr20 62556521 62556625 -9597257 + L2 LINE L2 3118 3219 -94 1438 181 4 8 chr20 62556665 62556931 -9596951 + AluJo SINE Alu 5 269 -43 24 32 0 0 chr20 62557054 62557085 -9596797 + AT_rich Low_complexity Low_complexity 1 31 0 1953 122 34 3 chr20 62557089 62557383 -9596499 + AluSx SINE Alu 1 303 -9 276 30 0 0 chr20 62557383 62557416 -9596466 + (GA)n Simple_repeat Simple_repeat 2 34 0 471 196 59 0 chr20 62557417 62557519 -9596363 - FLAM_C SINE Alu -32 111 4 899 111 11 106 chr20 62557587 62557767 -9596115 + FRAM SINE Alu 1 163 -13 2028 119 0 6 chr20 62557915 62558227 -9595655 - AluSx SINE Alu -2 310 1 594 249 110 0 chr20 62558805 62558978 -9594904 - MER58A DNA MER1_type -1 223 32 1877 114 46 4 chr20 62559037 62559318 -9594564 - AluSx SINE Alu -19 293 1 183 80 0 0 chr20 62559344 62559369 -9594513 + (TTA)n Simple_repeat Simple_repeat 2 26 0 1007 142 0 0 chr20 62559377 62559539 -9594343 - AluSg/x SINE Alu -14 296 135 251 54 27 0 chr20 62559564 62559601 -9594281 + (GAAA)n Simple_repeat Simple_repeat 1 38 0 203 133 0 0 chr20 62559601 62559631 -9594251 + (GGGA)n Simple_repeat Simple_repeat 3 32 0 862 187 12 0 chr20 62559853 62560019 -9593863 - AluJb SINE Alu -1 311 144 1706 100 4 4 chr20 62560024 62560263 -9593619 - AluSp SINE Alu -74 239 1 21 36 0 0 chr20 62560346 62560374 -9593508 + AT_rich Low_complexity Low_complexity 1 28 0 1970 134 3 0 chr20 62560553 62560851 -9593031 + AluSq SINE Alu 1 299 -14 1924 112 65 0 chr20 62561823 62562101 -9591781 + AluSg SINE Alu 4 299 -11 21 0 0 0 chr20 62562322 62562343 -9591539 + AT_rich Low_complexity Low_complexity 1 21 0 2052 124 0 7 chr20 62562348 62562654 -9591228 - AluSq SINE Alu -9 304 1 1636 146 9 41 chr20 62562655 62562971 -9590911 - L1MC2 LINE L1 -16 6328 6023 2082 106 7 7 chr20 62563028 62563320 -9590562 - AluSg SINE Alu -18 292 1 1930 138 0 3 chr20 62563429 62563726 -9590156 + AluSx SINE Alu 1 296 -16 2150 86 0 0 chr20 62563726 62564006 -9589876 + AluY SINE Alu 1 280 -31 521 301 175 46 chr20 62564450 62564974 -9588908 - L2 LINE L2 0 3313 2702 * 1776 261 137 38 chr20 62564967 62565460 -9588422 + L2 LINE L2 2147 2589 -724 1957 127 28 0 chr20 62565460 62565751 -9588131 - AluSx SINE Alu -13 299 1 1776 261 137 38 chr20 62565751 62565831 -9588051 + L2 LINE L2 2589 2660 -653 1622 187 0 0 chr20 62565831 62566109 -9587773 + AluJo SINE Alu 5 282 -30 423 0 0 0 chr20 62566116 62566163 -9587719 + (CA)n Simple_repeat Simple_repeat 1 47 0 1776 261 137 38 chr20 62566163 62566404 -9587478 + L2 LINE L2 2665 3033 -280 1971 117 0 3 chr20 62566443 62566755 -9587127 + AluSq SINE Alu 1 311 0 1406 188 29 48 chr20 62566755 62566895 -9586987 - MER58B DNA MER1_type -2110 310 169 2197 101 7 0 chr20 62566895 62567202 -9586680 + AluSx SINE Alu 3 311 -1 1406 188 29 48 chr20 62567202 62567375 -9586507 - MER58B DNA MER1_type -2251 169 3 294 29 0 0 chr20 62567453 62567488 -9586394 + (TTTCC)n Simple_repeat Simple_repeat 1 35 0 1663 199 0 6 chr20 62567489 62567893 -9585989 - AluJo SINE Alu 0 402 1 702 78 26 9 chr20 62567969 62568084 -9585798 + (TTCC)n Simple_repeat Simple_repeat 4 120 0 1275 165 0 96 chr20 62568090 62568264 -9585618 - AluJo SINE Alu -38 274 140 2097 109 3 0 chr20 62568264 62568557 -9585325 + AluSq SINE Alu 1 294 -19 1275 165 0 96 chr20 62568557 62568685 -9585197 - AluJo SINE Alu -172 140 1 372 228 74 104 chr20 62568686 62568888 -9584994 + L2 LINE L2 3115 3310 -3 218 255 0 94 chr20 62569177 62569283 -9584599 + MER5A DNA MER1_type 16 111 -78 * 300 333 76 44 chr20 62569281 62569378 -9584504 + MIR SINE MIR 31 124 -138 1998 106 3 3 chr20 62569378 62569701 -9584181 + AluSx SINE Alu 1 323 0 300 333 76 44 chr20 62569701 62569827 -9584055 + MIR SINE MIR 124 262 0 633 250 28 11 chr20 62570014 62570190 -9583692 + L1MC5 LINE L1 7303 7481 -480 634 164 0 0 chr20 62570191 62570295 -9583587 + FLAM_C SINE Alu 33 136 -7 2069 117 0 0 chr20 62570298 62570596 -9583286 + AluSx SINE Alu 1 298 -14 387 41 0 0 chr20 62570596 62570645 -9583237 + (TCTA)n Simple_repeat Simple_repeat 1 49 0 404 213 38 0 chr20 62570676 62570756 -9583126 + MER3 DNA MER1_type 1 83 -126 2580 33 0 0 chr20 62570760 62571060 -9582822 - AluY SINE Alu -11 300 1 180 0 0 0 chr20 62571070 62571090 -9582792 + (TC)n Simple_repeat Simple_repeat 1 20 0 1148 163 0 140 chr20 62571090 62571222 -9582660 - AluJo SINE Alu -48 264 115 2099 101 7 3 chr20 62571222 62571518 -9582364 - AluSx SINE Alu -15 297 1 1148 163 0 140 chr20 62571518 62571529 -9582353 - AluJo SINE Alu -197 115 104 2204 109 0 0 chr20 62571529 62571842 -9582040 - AluSp SINE Alu 0 313 1 1148 163 0 140 chr20 62571842 62572004 -9581878 - AluJo SINE Alu -208 104 1 316 242 86 96 chr20 62572005 62572203 -9581679 + L2 LINE L2 3115 3310 -3 279 231 0 0 chr20 62572471 62572523 -9581359 - AluSc SINE Alu -15 284 233 620 177 0 40 chr20 62572551 62572675 -9581207 - FLAM_C SINE Alu -21 122 4 1936 95 37 4 chr20 62572708 62573023 -9580859 + AluSx SINE Alu 1 324 0 801 229 0 0 chr20 62573023 62573167 -9580715 - FRAM SINE Alu -32 144 1 2437 48 0 0 chr20 62573196 62573485 -9580397 + AluY SINE Alu 1 289 -22 2267 101 0 0 chr20 62573510 62573816 -9580066 + AluSg SINE Alu 3 308 -2 2376 73 3 0 chr20 62573818 62574119 -9579763 + AluSg SINE Alu 1 302 -8 822 196 0 26 chr20 62574125 62574278 -9579604 - MER2 DNA MER2_type -196 149 1 964 206 0 0 chr20 62574637 62574821 -9579061 + AluJb SINE Alu 121 304 -8 2398 71 3 0 chr20 62574831 62575139 -9578743 + AluSp SINE Alu 1 309 -4 316 310 85 40 chr20 62575227 62575427 -9578455 + L2 LINE L2 2766 2974 -340 2262 82 7 7 chr20 62575428 62575732 -9578150 + AluSx SINE Alu 1 304 -8 32 0 0 0 chr20 62575779 62575811 -9578071 + AT_rich Low_complexity Low_complexity 1 32 0 1772 146 29 0 chr20 62575812 62576093 -9577789 - AluSx SINE Alu -23 289 1 203 349 0 12 chr20 62576102 62576185 -9577697 + L2 LINE L2 2978 3059 -213 865 201 14 104 chr20 62576230 62576518 -9577364 + ORSL DNA AcHobo 10 271 -4 2119 62 3 34 chr20 62576536 62576852 -9577030 - AluY SINE Alu 0 307 1 1989 104 32 19 chr20 62576942 62577250 -9576632 - AluSq SINE Alu -1 312 1 989 102 36 30 chr20 62577314 62577480 -9576402 + BC200 scRNA scRNA 1 167 -33 755 178 0 0 chr20 62577480 62577598 -9576284 - AluJo/FLAM SINE Alu -184 118 1 1586 162 3 30 chr20 62577804 62578123 -9575759 - AluJo SINE Alu 0 312 1 2183 102 0 0 chr20 62578510 62578804 -9575078 + AluSg SINE Alu 1 294 -16 22 0 0 0 chr20 62578807 62578829 -9575053 + AT_rich Low_complexity Low_complexity 1 22 0 2255 84 0 40 chr20 62579259 62579432 -9574450 + AluSq SINE Alu 1 157 -156 2124 93 7 3 chr20 62579432 62579734 -9574148 - AluSg SINE Alu -7 303 1 2255 84 0 40 chr20 62579734 62579881 -9574001 + AluSq SINE Alu 157 308 -5 826 219 82 6 chr20 62580356 62580572 -9573310 + MIR SINE MIR 33 262 0 21 0 0 0 chr20 62581159 62581180 -9572702 + AT_rich Low_complexity Low_complexity 1 21 0 351 294 71 56 chr20 62581654 62581851 -9572031 + MIR SINE MIR 23 222 -40 2160 100 3 3 chr20 62582983 62583283 -9570599 + AluSx SINE Alu 1 300 -12 1621 124 20 4 chr20 62583287 62583536 -9570346 + AluSq SINE Alu 1 253 -60 26 0 0 0 chr20 62583536 62583562 -9570320 + AT_rich Low_complexity Low_complexity 1 26 0 2242 96 0 13 chr20 62583562 62583875 -9570007 + AluSg SINE Alu 1 309 -1 2500 52 0 0 chr20 62583921 62584228 -9569654 + AluY SINE Alu 1 307 -4 2108 85 3 0 chr20 62584907 62585212 -9568670 - AluY SINE Alu 0 306 1 225 0 0 0 chr20 62585212 62585237 -9568645 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 1760 124 0 50 chr20 62585237 62585535 -9568347 - AluSx SINE Alu -29 283 1 2255 112 0 3 chr20 62585664 62585978 -9567904 + AluSq SINE Alu 1 313 0 2063 113 7 0 chr20 62586569 62586878 -9567004 - AluY SINE Alu 0 311 1 2192 84 0 7 chr20 62587078 62587376 -9566506 + AluY SINE Alu 1 296 -15 1949 125 3 14 chr20 62587537 62587832 -9566050 - AluSq SINE Alu -21 292 1 254 161 0 129 chr20 62587856 62587871 -9566011 + AluY SINE Alu 118 133 -168 2055 112 10 0 chr20 62587871 62588166 -9565716 + AluSx SINE Alu 1 298 -14 254 161 0 129 chr20 62588166 62588212 -9565670 + AluY SINE Alu 133 171 -130 * 395 155 0 64 chr20 62588193 62588287 -9565595 + AluJ/FRAM SINE Alu 228 302 0 948 160 0 6 chr20 62588320 62588476 -9565406 - FRAM SINE Alu -30 146 1 859 201 0 0 chr20 62588601 62588765 -9565117 - FRAM SINE Alu -15 161 1 2133 117 0 10 chr20 62588820 62589129 -9564753 + AluSx SINE Alu 1 306 -6 2072 102 3 13 chr20 62589129 62589443 -9564439 + AluY SINE Alu 1 311 0 2250 103 0 0 chr20 62589483 62589784 -9564098 + AluSg1 SINE Alu 1 301 -8 237 183 0 0 chr20 62590059 62590119 -9563763 + T-rich Low_complexity Low_complexity 1 60 0 2150 71 24 14 chr20 62591222 62591519 -9562363 - AluSx SINE Alu -12 300 1 2014 136 0 0 chr20 62591905 62592206 -9561676 + AluSx SINE Alu 12 312 0 623 93 0 35 chr20 62592206 62592292 -9561590 - AluJo/FLAM SINE Alu -194 118 36 279 214 0 0 chr20 62592433 62592503 -9561379 + A-rich Low_complexity Low_complexity 5 74 0 198 0 0 0 chr20 62592771 62592793 -9561089 + (TG)n Simple_repeat Simple_repeat 2 23 0 23 0 0 0 chr20 62593143 62593166 -9560716 + AT_rich Low_complexity Low_complexity 1 23 0 544 258 80 107 chr20 62593208 62593299 -9560583 - L1MC5 LINE L1 -37 7924 7832 2432 78 0 0 chr20 62593299 62593608 -9560274 - AluY SINE Alu 0 311 3 544 258 80 107 chr20 62593608 62593881 -9560001 - L1MC5 LINE L1 -129 7832 7570 567 274 58 73 chr20 62593897 62594310 -9559572 - L1ME4a LINE L1 -197 5924 5518 264 259 238 16 chr20 62595453 62595642 -9558240 - MIR SINE MIR -11 251 21 51 0 0 0 chr20 62596382 62596433 -9557449 + AT_rich Low_complexity Low_complexity 1 51 0 1670 77 104 23 chr20 62596439 62596698 -9557184 - AluSx SINE Alu -32 280 1 25 0 0 0 chr20 62596698 62596723 -9557159 + AT_rich Low_complexity Low_complexity 1 25 0 1061 74 0 0 chr20 62596749 62596884 -9556998 - AluSq/x SINE Alu -176 136 2 198 0 0 0 chr20 62596884 62596906 -9556976 + (TA)n Simple_repeat Simple_repeat 2 23 0 2300 77 0 0 chr20 62596906 62597205 -9556677 - AluY SINE Alu -12 299 1 1375 141 104 54 chr20 62597212 62597509 -9556373 - AluJo SINE Alu 0 312 1 285 318 47 20 chr20 62597511 62597659 -9556223 - MIR SINE MIR -101 161 10 316 263 123 83 chr20 62597840 62598068 -9555814 + MIR SINE MIR 13 249 -13 1773 129 14 0 chr20 62598075 62598353 -9555529 - AluSx SINE Alu 0 312 31 903 152 73 0 chr20 62598413 62598577 -9555305 - AluJb SINE Alu 0 312 137 1816 108 17 37 chr20 62598580 62598876 -9555006 - AluSq SINE Alu -11 302 13 1198 291 104 12 chr20 62599068 62599597 -9554285 + L2 LINE L2 2729 3307 -6 2130 102 0 3 chr20 62599632 62599936 -9553946 + AluSq SINE Alu 1 303 -10 1814 99 75 14 chr20 62599944 62600226 -9553656 + AluSx SINE Alu 1 299 -13 2041 83 43 0 chr20 62600638 62600916 -9552966 - AluSx SINE Alu -22 290 1 2231 81 0 7 chr20 62600932 62601228 -9552654 - AluSg SINE Alu -16 294 1 300 277 91 0 chr20 62601258 62601391 -9552491 - L1ME LINE L1 -373 5789 5642 389 269 26 58 chr20 62601409 62601565 -9552317 + L2 LINE L2 3159 3309 -4 1462 157 37 53 chr20 62602023 62602181 -9551701 - AluJb SINE Alu -16 296 144 2160 71 14 7 chr20 62602181 62602477 -9551405 - AluY SINE Alu -13 298 1 1462 157 37 53 chr20 62602477 62602617 -9551265 - AluJb SINE Alu -168 144 3 2413 80 0 3 chr20 62602639 62602953 -9550929 + AluSq SINE Alu 1 313 0 243 255 0 0 chr20 62603307 62603358 -9550524 + MIR SINE MIR 74 124 -138 683 143 0 0 chr20 62603358 62603463 -9550419 - AluSg SINE Alu 0 309 205 1038 70 0 0 chr20 62603463 62603591 -9550291 - AluSg SINE Alu -181 129 2 448 243 22 29 chr20 62603594 62603730 -9550152 + HAL1b LINE L1 935 1069 -279 214 300 17 0 chr20 62603730 62603790 -9550092 + L2 LINE L2 2746 2806 -508 1299 167 41 30 chr20 62603810 62604131 -9549751 - AluJb SINE Alu 0 334 11 212 0 36 0 chr20 62604197 62604225 -9549657 + (TTG)n Simple_repeat Simple_repeat 2 30 0 1926 122 11 0 chr20 62604229 62604516 -9549366 - AluSx SINE Alu -22 290 1 2185 96 0 13 chr20 62604754 62605055 -9548827 + AluSg SINE Alu 1 297 -13 2035 96 15 0 chr20 62605300 62605572 -9548310 + AluSx SINE Alu 11 286 -26 183 162 0 0 chr20 62605893 62605930 -9547952 + CT-rich Low_complexity Low_complexity 2 38 0 203 357 45 18 chr20 62606620 62606732 -9547150 - MIR3 SINE MIR -6 202 88 236 261 46 0 chr20 62606772 62606837 -9547045 + MIR3 SINE MIR 102 169 -39 302 302 16 62 chr20 62608083 62608212 -9545670 + L1MDa LINE L1 2421 2543 -3997 475 313 159 6 chr20 62609121 62609303 -9544579 + MIR SINE MIR 53 262 0 399 239 60 103 chr20 62609619 62609637 -9544245 - L1M4 LINE L1 -2803 3343 3326 1737 119 47 22 chr20 62609637 62609915 -9543967 - AluSx SINE Alu -27 285 1 399 239 60 103 chr20 62609915 62610045 -9543837 - L1M4 LINE L1 -2820 3326 3206 2100 62 38 14 chr20 62610045 62610336 -9543546 - AluY SINE Alu -13 298 1 399 239 60 103 chr20 62610336 62610420 -9543462 - L1M4 LINE L1 -2940 3206 3120 204 40 0 0 chr20 62610596 62610621 -9543261 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 2361 76 3 6 chr20 62612688 62613002 -9540880 - AluSp SINE Alu 0 313 1 883 148 0 7 chr20 62613168 62613310 -9540572 - FLAM_C SINE Alu -2 141 1 269 253 222 10 chr20 62613316 62613415 -9540467 + L2 LINE L2 3180 3299 -14 2023 118 0 3 chr20 62613512 62613801 -9540081 + AluSx SINE Alu 1 288 -24 1753 122 7 51 chr20 62613965 62614285 -9539597 - AluSx SINE Alu 0 307 1 2207 78 3 20 chr20 62614356 62614662 -9539220 + AluSc SINE Alu 1 301 -8 283 350 10 10 chr20 62614831 62614934 -9538948 + L2 LINE L2 3192 3294 -19 2155 86 0 38 chr20 62615433 62615746 -9538136 - AluSc SINE Alu -8 301 1 1520 166 23 10 chr20 62615747 62616055 -9537827 - AluJo SINE Alu 0 312 1 603 273 77 39 chr20 62616055 62616135 -9537747 - MLT1H LTR MaLR -1 548 473 2711 19 0 0 chr20 62616135 62616446 -9537436 - AluYa5 SINE Alu 0 311 1 1616 192 14 0 chr20 62616452 62616739 -9537143 - AluJb SINE Alu -20 292 2 603 273 77 39 chr20 62616739 62616911 -9536971 - MLT1H LTR MaLR -80 469 279 1347 164 33 22 chr20 62616919 62617194 -9536688 - AluJb SINE Alu -29 283 6 2236 88 0 3 chr20 62617369 62617665 -9536217 - AluSp SINE Alu -17 296 2 180 320 0 0 chr20 62617789 62617839 -9536043 + MIR SINE MIR 85 134 -128 1743 99 20 131 chr20 62618028 62618371 -9535511 + AluYb8 SINE Alu 1 305 -3 1711 99 4 28 chr20 62618486 62618780 -9535102 - AluSx SINE Alu 0 326 39 2087 117 0 0 chr20 62618954 62619245 -9534637 + AluSx SINE Alu 9 299 -13 222 116 0 0 chr20 62619254 62619297 -9534585 + (T)n Simple_repeat Simple_repeat 1 43 0 438 83 17 0 chr20 62619309 62619369 -9534513 - U7 snRNA snRNA -1 62 2 2306 92 0 0 chr20 62619434 62619739 -9534143 - AluSx SINE Alu -7 305 1 459 193 64 0 chr20 62620003 62620112 -9533770 + LTR9B LTR ERV1 445 560 -84 238 342 12 0 chr20 62620135 62620236 -9533646 + MIR SINE MIR 15 117 -91 851 196 0 0 chr20 62620241 62620409 -9533473 - AluSg/x SINE Alu -8 304 137 2177 92 23 0 chr20 62620409 62620712 -9533170 - AluSp SINE Alu -3 310 1 1601 186 4 0 chr20 62620749 62621054 -9532828 + AluJo SINE Alu 1 306 0 747 194 0 16 chr20 62621061 62621190 -9532692 + FLAM_A SINE Alu 1 127 -6 2256 101 7 0 chr20 62621266 62621572 -9532310 + AluSg SINE Alu 1 308 -2 2234 75 17 0 chr20 62621629 62621922 -9531960 + AluSp SINE Alu 1 298 -15 1358 193 65 31 chr20 62621935 62622288 -9531594 + MLT1A1 LTR MaLR 1 365 0 2203 119 0 0 chr20 62622427 62622737 -9531145 - AluSx SINE Alu -2 310 1 2218 52 42 3 chr20 62622881 62623170 -9530712 - AluY SINE Alu -11 300 1 180 0 0 0 chr20 62623192 62623212 -9530670 + (A)n Simple_repeat Simple_repeat 1 20 0 495 257 79 0 chr20 62623270 62623422 -9530460 - MER103 DNA DNA 0 166 3 2063 134 0 0 chr20 62623609 62623914 -9529968 - AluSx SINE Alu -5 307 3 23 54 0 0 chr20 62624012 62624049 -9529833 + AT_rich Low_complexity Low_complexity 1 37 0 642 186 0 26 chr20 62624049 62624162 -9529720 - FLAM_C SINE Alu -25 118 9 225 302 73 31 chr20 62624250 62624346 -9529536 - HAL1b LINE L1 -43 1305 1206 2175 102 0 0 chr20 62624406 62624701 -9529181 - AluSg SINE Alu -15 295 1 1845 110 72 3 chr20 62624790 62625082 -9528800 - AluSq SINE Alu -1 312 1 1967 137 3 0 chr20 62625082 62625389 -9528493 - AluSx SINE Alu -4 308 1 2302 53 0 0 chr20 62625500 62625804 -9528078 + AluY SINE Alu 1 304 0 1649 153 0 39 chr20 62625829 62626137 -9527745 - AluSx SINE Alu -16 296 1 287 254 55 27 chr20 62626137 62626247 -9527635 - L1ME LINE L1 -462 5659 5547 2193 93 0 7 chr20 62626291 62626592 -9527290 - AluSg SINE Alu -9 301 3 1773 167 3 0 chr20 62626599 62626893 -9526989 - AluJb SINE Alu -17 295 1 2142 113 0 3 chr20 62626905 62627216 -9526666 - AluSx SINE Alu -2 310 1 183 159 0 175 chr20 62627695 62627742 -9526140 + L2 LINE L2 3262 3297 -16 1792 152 0 35 chr20 62627742 62628057 -9525825 + AluSx SINE Alu 1 304 -8 183 159 0 175 chr20 62628057 62628072 -9525810 + L2 LINE L2 3297 3313 0 596 274 102 35 chr20 62628224 62628538 -9525344 + MER102b DNA MER1_type 2 336 -5 22 0 0 0 chr20 62629657 62629679 -9524203 + AT_rich Low_complexity Low_complexity 1 22 0 26 0 0 0 chr20 62629921 62629947 -9523935 + AT_rich Low_complexity Low_complexity 1 26 0 2013 110 10 0 chr20 62630985 62631276 -9522606 - AluSx SINE Alu -18 294 1 2134 100 0 16 chr20 62631723 62632034 -9521848 + AluSx SINE Alu 6 311 -1 359 309 24 67 chr20 62632132 62632228 -9521654 + MIR SINE MIR 70 158 -104 2178 102 3 0 chr20 62632228 62632531 -9521351 + AluSp SINE Alu 1 304 -9 359 309 24 67 chr20 62632531 62632599 -9521283 + MIR SINE MIR 158 227 -35 823 177 0 0 chr20 62632628 62632769 -9521113 + FLAM_C SINE Alu 1 141 -2 403 167 219 10 chr20 62632855 62632951 -9520931 - AluJo/FRAM SINE Alu -63 249 134 2013 147 0 0 chr20 62632951 62633250 -9520632 - AluSx SINE Alu -13 299 1 535 178 0 11 chr20 62633281 62633371 -9520511 + AluJo SINE Alu 86 174 -138 1851 124 0 79 chr20 62633549 62633687 -9520195 + AluSx SINE Alu 1 148 -164 2219 118 0 0 chr20 62633687 62633993 -9519889 + AluSg SINE Alu 3 308 -2 1851 124 0 79 chr20 62633993 62634184 -9519698 + AluSx SINE Alu 148 304 -8 565 304 78 11 chr20 62634199 62634390 -9519492 - MIR SINE MIR -18 244 41 2352 61 0 0 chr20 62634573 62634869 -9519013 - AluY SINE Alu -15 296 1 189 107 0 0 chr20 62634878 62634906 -9518976 + (ATTG)n Simple_repeat Simple_repeat 2 29 0 1881 97 64 0 chr20 62634965 62635257 -9518625 + AluSx SINE Alu 1 309 0 1665 156 10 7 chr20 62635260 62635555 -9518327 - AluJb SINE Alu -16 296 1 267 221 0 59 chr20 62635901 62635969 -9517913 + MER45A DNA AcHobo 1 64 -114 424 226 0 0 chr20 62635969 62636053 -9517829 - AluJ/FLAM SINE Alu -227 85 2 507 158 0 12 chr20 62636057 62636139 -9517743 + MER45A DNA AcHobo 97 177 -1 436 190 0 0 chr20 62636214 62636293 -9517589 - MIR SINE MIR -60 202 124 183 26 26 53 chr20 62636429 62636467 -9517415 + (CAAAA)n Simple_repeat Simple_repeat 2 38 0 2037 109 3 29 chr20 62636940 62637253 -9516629 + AluSc SINE Alu 1 305 -4 2043 91 18 11 chr20 62637267 62637552 -9516330 + AluSq SINE Alu 3 289 -24 216 0 0 0 chr20 62637555 62637579 -9516303 + (TAA)n Simple_repeat Simple_repeat 3 26 0 2147 104 10 7 chr20 62637580 62637888 -9515994 + AluSx SINE Alu 1 309 -3 261 163 0 0 chr20 62638232 62638281 -9515601 + CT-rich Low_complexity Low_complexity 1 49 0 539 252 92 19 chr20 62638614 62638659 -9515223 - MIR SINE MIR -10 252 212 817 145 7 43 chr20 62638659 62638797 -9515085 - FLAM_C SINE Alu 0 133 1 539 252 92 19 chr20 62638797 62638957 -9514925 - MIR SINE MIR -50 212 32 1438 173 36 65 chr20 62638978 62639093 -9514789 + AluJo SINE Alu 5 122 -180 2572 29 0 10 chr20 62639093 62639401 -9514481 + AluY SINE Alu 1 305 -6 1438 173 36 65 chr20 62639401 62639591 -9514291 + AluJo SINE Alu 122 301 -1 2096 119 0 13 chr20 62639805 62640116 -9513766 - AluSg SINE Alu -2 308 2 1916 109 49 11 chr20 62640118 62640268 -9513614 - AluSp SINE Alu -16 297 154 2332 83 0 0 chr20 62640268 62640568 -9513314 - AluSc SINE Alu -9 300 1 1916 109 49 11 chr20 62640568 62640702 -9513180 - AluSp SINE Alu -159 154 2 2047 139 0 0 chr20 62640702 62641005 -9512877 - AluSx SINE Alu -9 303 1 647 301 34 6 chr20 62641023 62641199 -9512683 + MIR SINE MIR 30 210 -52 1985 112 10 7 chr20 62641358 62641652 -9512230 + AluY SINE Alu 5 299 -12 1388 152 188 12 chr20 62641819 62642075 -9511807 + AluJo SINE Alu 2 302 0 346 345 40 43 chr20 62642119 62642397 -9511485 - L2 LINE L2 -643 2671 2395 2205 89 7 3 chr20 62642806 62643108 -9510774 + AluSx SINE Alu 1 303 -9 252 286 0 13 chr20 62643293 62643370 -9510512 + L2 LINE L2 3234 3309 -4 1208 147 5 0 chr20 62643646 62643844 -9510038 + L1PB1 LINE L1 5953 6151 0 2018 180 62 22 chr20 62643874 62644181 -9509701 - L1MB7 LINE L1 -4 6180 5848 2111 106 7 3 chr20 62644181 62644483 -9509399 - AluSq SINE Alu -10 303 1 2018 180 62 22 chr20 62644483 62644624 -9509258 - L1MB7 LINE L1 -336 5848 5714 216 0 0 0 chr20 62644624 62644648 -9509234 + (TA)n Simple_repeat Simple_repeat 2 25 0 2042 104 40 3 chr20 62644648 62644947 -9508935 - AluSg SINE Alu 0 310 1 1828 129 7 0 chr20 62644950 62645268 -9508614 - AluSx SINE Alu 0 321 2 744 208 51 37 chr20 62645271 62645487 -9508395 - MER113 DNA MER1_type? -168 353 135 2411 52 0 16 chr20 62645552 62645862 -9508020 + AluY SINE Alu 1 305 -6 1706 164 0 14 chr20 62645937 62646230 -9507652 + AluSx SINE Alu 20 308 -4 180 0 0 0 chr20 62646291 62646311 -9507571 + (TTTTA)n Simple_repeat Simple_repeat 1 20 0 763 153 0 44 chr20 62646390 62646527 -9507355 - FLAM_C SINE Alu 0 133 3 450 236 221 8 chr20 62646527 62646654 -9507228 - MIR SINE MIR -33 229 76 2443 59 0 0 chr20 62647194 62647500 -9506382 - AluY SINE Alu -1 310 5 1969 133 0 7 chr20 62647621 62647923 -9505959 + AluJo SINE Alu 1 300 -12 2312 83 3 3 chr20 62647926 62648238 -9505644 + AluSp SINE Alu 1 312 -1 323 191 55 9 chr20 62648264 62648374 -9505508 + GA-rich Low_complexity Low_complexity 5 119 0 2157 92 7 7 chr20 62648376 62648681 -9505201 + AluSg SINE Alu 1 305 -5 2114 112 0 0 chr20 62648909 62649204 -9504678 - AluSg SINE Alu -14 296 2 519 235 23 53 chr20 62649231 62649363 -9504519 + MIR SINE MIR 15 142 -120 185 0 40 0 chr20 62649462 62649487 -9504395 + (TTTTG)n Simple_repeat Simple_repeat 5 30 0 1621 64 0 5 chr20 62649487 62649689 -9504193 - AluSq SINE Alu -32 281 81 1014 197 178 19 chr20 62649693 62649835 -9504047 - AluJo SINE Alu 0 302 184 186 43 0 0 chr20 62649835 62649858 -9504024 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1014 197 178 19 chr20 62649858 62649974 -9503908 - AluJo SINE Alu -118 184 3 660 211 0 0 chr20 62650032 62650146 -9503736 - MER81 DNA DNA 0 114 1 324 271 121 43 chr20 62650234 62650374 -9503508 + MER5A DNA MER1_type 36 186 -3 180 281 35 0 chr20 62650511 62650568 -9503314 + MIR SINE MIR 92 150 -112 2027 140 0 0 chr20 62650887 62651187 -9502695 - AluSx SINE Alu -12 300 1 2350 79 0 0 chr20 62651216 62651519 -9502363 - AluY SINE Alu -8 303 1 1391 192 44 85 chr20 62651534 62651944 -9501938 - L1MD2 LINE L1 -8 6234 5891 1584 156 23 23 chr20 62651944 62652252 -9501630 - AluJo SINE Alu -4 308 1 1391 192 44 85 chr20 62652252 62652345 -9501537 - L1MD2 LINE L1 -351 5891 5796 2161 82 7 7 chr20 62652501 62652804 -9501078 + AluSq SINE Alu 1 303 -10 2113 42 3 24 chr20 62652804 62653119 -9500763 + AluY SINE Alu 1 309 0 1772 141 11 0 chr20 62653269 62653545 -9500337 + AluSx SINE Alu 1 279 -33 742 237 6 17 chr20 62653548 62653725 -9500157 - AluJb SINE Alu -1 311 137 387 0 0 0 chr20 62653725 62653768 -9500114 + (TTA)n Simple_repeat Simple_repeat 2 44 0 2060 106 0 3 chr20 62653768 62654051 -9499831 - AluSx SINE Alu -30 282 1 1937 89 0 28 chr20 62654110 62654412 -9499470 - AluSx SINE Alu 0 312 15 2028 120 0 0 chr20 62654419 62654710 -9499172 - AluSx SINE Alu -19 293 3 215 61 30 0 chr20 62654716 62654749 -9499133 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 759 192 0 0 chr20 62654749 62654869 -9499013 - FLAM_C SINE Alu -22 121 2 1097 201 6 34 chr20 62654872 62654892 -9498990 - L1MB5 LINE L1 -348 5826 5807 2335 66 3 0 chr20 62654892 62655197 -9498685 - AluY SINE Alu -5 306 1 1097 201 6 34 chr20 62655197 62655224 -9498658 - L1MB5 LINE L1 -367 5807 5781 2223 88 0 0 chr20 62655224 62655529 -9498353 + AluSc SINE Alu 1 305 -4 1097 201 6 34 chr20 62655529 62655769 -9498113 - L1MB5 LINE L1 -393 5781 5567 2251 85 0 16 chr20 62656004 62656321 -9497561 - AluSp SINE Alu -1 312 1 2179 112 0 0 chr20 62656326 62656629 -9497253 - AluSx SINE Alu -9 303 1 459 287 80 13 chr20 62657583 62657733 -9496149 + MER63A DNA MER1_type 27 186 -24 663 212 4 0 chr20 62658030 62658286 -9495596 + (CA)n Simple_repeat Simple_repeat 1 257 0 342 301 62 34 chr20 62659063 62659209 -9494673 + MIR SINE MIR 102 251 -11 2461 165 2 89 chr20 62659268 62659321 -9494561 - L1MB3 LINE L1 -2 6181 6125 297 0 0 0 chr20 62659321 62659354 -9494528 + (TCCCC)n Simple_repeat Simple_repeat 5 37 0 1656 166 6 42 chr20 62659357 62659670 -9494212 - AluJo SINE Alu -10 302 1 2461 165 2 89 chr20 62659670 62659810 -9494072 - L1MB3 LINE L1 -60 6123 5972 2107 99 0 0 chr20 62659810 62660119 -9493763 + AluSg SINE Alu 1 309 0 2461 165 2 89 chr20 62660119 62660317 -9493565 - L1MB3 LINE L1 -211 5972 5844 1625 146 23 33 chr20 62660317 62660619 -9493263 - AluJb SINE Alu -13 299 1 2461 165 2 89 chr20 62660619 62660788 -9493094 - L1MB3 LINE L1 -339 5844 5662 2376 67 0 0 chr20 62660820 62661117 -9492765 - AluY SINE Alu -14 297 1 1457 123 4 78 chr20 62661184 62661267 -9492615 + AluJo SINE Alu 57 145 -167 2205 109 0 0 chr20 62661267 62661571 -9492311 + AluSx SINE Alu 1 304 -8 1457 123 4 78 chr20 62661571 62661756 -9492126 + AluJo SINE Alu 145 305 -7 226 327 65 0 chr20 62661776 62661883 -9491999 + L2 LINE L2 3031 3144 -169 872 175 23 47 chr20 62661907 62662078 -9491804 + AluJo SINE Alu 105 271 -41 467 222 76 35 chr20 62662086 62662230 -9491652 + L2 LINE L2 3161 3310 -3 530 135 0 10 chr20 62662734 62662830 -9491052 + (TCCC)n Simple_repeat Simple_repeat 4 98 0 331 312 0 0 chr20 62663109 62663186 -9490696 + MIR3 SINE MIR 81 157 -51 459 78 16 0 chr20 62663436 62663500 -9490382 + AluSg/x SINE Alu 85 149 -161 532 221 104 18 chr20 62663504 62663667 -9490215 + MER20 DNA MER1_type 43 219 0 965 105 0 0 chr20 62663777 62663920 -9489962 - AluSp/q SINE Alu -2 311 169 223 253 101 20 chr20 62664062 62664161 -9489721 - L2 LINE L2 0 3272 3166 1606 117 67 24 chr20 62664706 62665004 -9488878 - AluSx SINE Alu -1 311 1 1100 232 17 17 chr20 62665279 62665520 -9488362 + MIR SINE MIR 19 259 -3 2227 90 3 3 chr20 62665571 62665872 -9488010 + AluSx SINE Alu 1 301 -11 636 269 19 0 chr20 62666173 62666329 -9487553 + MER45A DNA AcHobo 1 159 -19 2296 86 0 3 chr20 62666371 62666674 -9487208 - AluSg SINE Alu -8 302 1 24 32 0 0 chr20 62666674 62666705 -9487177 + AT_rich Low_complexity Low_complexity 1 31 0 1957 141 0 3 chr20 62666722 62667027 -9486855 + AluSx SINE Alu 2 305 -7 1009 240 63 0 chr20 62667096 62667367 -9486515 + L1MD3 LINE L1 7694 7981 -14 26 74 0 0 chr20 62667429 62667483 -9486399 + AT_rich Low_complexity Low_complexity 1 54 0 2050 104 21 0 chr20 62667501 62667790 -9486092 - AluY SINE Alu -16 295 1 585 100 0 0 chr20 62667801 62667891 -9485991 + (TA)n Simple_repeat Simple_repeat 1 90 0 2034 114 6 22 chr20 62668107 62668422 -9485460 - AluSg SINE Alu 0 310 1 494 278 63 26 chr20 62668468 62668659 -9485223 - L1MC4a LINE L1 -1980 5828 5631 1805 161 3 0 chr20 62669303 62669595 -9484287 - AluJb SINE Alu -19 293 1 24 0 0 0 chr20 62669697 62669721 -9484161 + AT_rich Low_complexity Low_complexity 1 24 0 741 190 76 19 chr20 62669759 62669917 -9483965 + MLT1A2 LTR MaLR 1 167 -207 2048 114 3 0 chr20 62669917 62670207 -9483675 + AluSp SINE Alu 1 291 -22 2228 90 7 0 chr20 62670490 62670791 -9483091 + AluSp SINE Alu 1 303 -10 2103 107 21 0 chr20 62670801 62671090 -9482792 + AluSc SINE Alu 1 295 -14 2269 92 3 0 chr20 62671245 62671549 -9482333 - AluSp SINE Alu -8 305 1 805 146 83 154 chr20 62671918 62672013 -9481869 - MER58A DNA MER1_type -2197 223 123 1876 140 17 0 chr20 62672013 62672305 -9481577 - AluSx SINE Alu -11 301 5 805 146 83 154 chr20 62672305 62672449 -9481433 - MER58A DNA MER1_type -2297 123 1 2048 124 13 0 chr20 62672487 62672786 -9481096 + AluSx SINE Alu 1 303 -9 1979 115 0 29 chr20 62673018 62673331 -9480551 - AluSx SINE Alu -8 304 1 288 248 113 57 chr20 62673346 62673606 -9480276 + MLT1L LTR MaLR 219 598 -14 463 272 99 35 chr20 62673739 62673777 -9480105 + MIR SINE MIR 48 82 -180 1573 186 0 7 chr20 62673777 62674102 -9479780 - AluJb SINE Alu 0 327 5 463 272 99 35 chr20 62674102 62674264 -9479618 + MIR SINE MIR 82 262 0 1539 178 17 3 chr20 62674739 62675026 -9478856 - AluSx SINE Alu -21 291 1 1640 132 87 7 chr20 62675061 62675350 -9478532 - AluSq SINE Alu -1 312 1 2123 80 30 10 chr20 62675353 62675681 -9478201 - AluSx SINE Alu 0 312 1 972 294 61 17 chr20 62675711 62676071 -9477811 + LTR33 LTR ERVL 44 419 -102 2275 71 3 0 chr20 62676078 62676373 -9477509 - AluSp SINE Alu -17 296 1 238 200 0 0 chr20 62676381 62676426 -9477456 + LTR33 LTR ERVL 472 516 -5 310 226 88 75 chr20 62676426 62676585 -9477297 - MER102a DNA MER1_type -8 322 162 814 105 0 0 chr20 62676587 62676701 -9477181 - AluSg/x SINE Alu -10 302 189 22 56 0 0 chr20 62676717 62676753 -9477129 + AT_rich Low_complexity Low_complexity 1 36 0 192 236 83 42 chr20 62676941 62677013 -9476869 - MIR SINE MIR -60 202 128 1872 87 58 4 chr20 62677038 62677313 -9476569 - AluSq SINE Alu -17 296 7 1112 184 65 52 chr20 62677484 62677754 -9476128 - LTR8A LTR ERV1 -18 709 385 216 0 0 0 chr20 62677795 62677819 -9476063 + (A)n Simple_repeat Simple_repeat 1 24 0 1902 120 14 0 chr20 62677821 62678146 -9475736 + AluSx SINE Alu 3 331 0 787 157 21 110 chr20 62678146 62678238 -9475644 - L1PB4 LINE L1 -32 6124 6056 864 113 8 38 chr20 62678238 62678371 -9475511 - FLAM_C SINE Alu -1 132 4 787 157 21 110 chr20 62678371 62678469 -9475413 - L1PB4 LINE L1 -100 6056 5951 780 183 0 0 chr20 62678470 62678601 -9475281 - FLAM_A SINE Alu -2 131 1 454 294 14 21 chr20 62678970 62679113 -9474769 - MIR SINE MIR -110 152 11 267 31 0 0 chr20 62679133 62679165 -9474717 + (TG)n Simple_repeat Simple_repeat 2 33 0 210 128 0 0 chr20 62679166 62679205 -9474677 + (GA)n Simple_repeat Simple_repeat 2 40 0 449 203 42 76 chr20 62679422 62679480 -9474402 + MLT1H LTR MaLR 43 97 -452 2225 84 0 7 chr20 62679480 62679778 -9474104 - AluY SINE Alu -15 296 1 449 203 42 76 chr20 62679778 62679837 -9474045 + MLT1H LTR MaLR 97 156 -393 2098 117 0 0 chr20 62679931 62680221 -9473661 + AluSx SINE Alu 2 291 -21 599 238 109 69 chr20 62680243 62680563 -9473319 + MLT1H LTR MaLR 217 549 0 2321 80 13 0 chr20 62680692 62680994 -9472888 - AluSg SINE Alu -4 306 1 721 98 0 170 chr20 62681070 62681223 -9472659 - FLAM_C SINE Alu -15 128 2 594 211 10 0 chr20 62681390 62681494 -9472388 - MER81 DNA DNA -5 109 5 180 0 0 0 chr20 62681499 62681519 -9472363 + (TTTTG)n Simple_repeat Simple_repeat 3 22 0 2157 97 0 0 chr20 62681588 62681876 -9472006 + AluSg SINE Alu 1 288 -22 216 0 0 0 chr20 62681878 62681902 -9471980 + (TG)n Simple_repeat Simple_repeat 1 24 0 353 281 49 0 chr20 62681906 62681988 -9471894 + L1MC4 LINE L1 6615 6700 -1342 1334 189 17 90 chr20 62681988 62682343 -9471539 + MLT1A1 LTR MaLR 37 365 0 2065 120 3 0 chr20 62682647 62682946 -9470936 - AluSq SINE Alu -13 300 1 210 71 0 0 chr20 62683068 62683096 -9470786 + (TTCA)n Simple_repeat Simple_repeat 4 31 0 251 290 21 54 chr20 62683099 62683192 -9470690 - L2 LINE L2 -5 3267 3178 808 118 8 0 chr20 62683193 62683312 -9470570 + AluSp SINE Alu 1 120 -193 507 182 189 15 chr20 62683319 62683451 -9470431 - MLT1C LTR MaLR -190 277 123 1477 75 0 0 chr20 62683458 62683644 -9470238 + AluSp SINE Alu 114 299 -14 417 303 88 78 chr20 62683890 62684069 -9469813 - L2 LINE L2 -339 2975 2799 1629 224 82 14 chr20 62684069 62684251 -9469631 + MLT1C LTR MaLR 1 169 -298 2264 72 3 0 chr20 62684251 62684543 -9469339 + AluY SINE Alu 3 295 -16 1629 224 82 14 chr20 62684543 62684797 -9469085 + MLT1C LTR MaLR 169 467 0 417 303 88 78 chr20 62684797 62685182 -9468700 - L2 LINE L2 -515 2799 2405 375 305 57 0 chr20 62685297 62685474 -9468408 - L1MC4a LINE L1 -1899 5909 5723 390 232 182 55 chr20 62685491 62685629 -9468253 + MER112 DNA MER1_type 6 125 -135 200 33 0 33 chr20 62685629 62685659 -9468223 + (CTATT)n Simple_repeat Simple_repeat 3 31 0 390 232 182 55 chr20 62685659 62685740 -9468142 + MER112 DNA MER1_type 125 253 -7 2323 102 0 0 chr20 62685776 62686089 -9467793 + AluSq SINE Alu 1 313 0 854 248 34 30 chr20 62686089 62686323 -9467559 - MIR SINE MIR -22 240 6 297 68 0 0 chr20 62686567 62686611 -9467271 + (TC)n Simple_repeat Simple_repeat 1 44 0 210 171 0 24 chr20 62687414 62687455 -9466427 + T-rich Low_complexity Low_complexity 4 43 0 185 0 40 0 chr20 62687834 62687859 -9466023 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 263 246 53 72 chr20 62689750 62689957 -9463925 - L1ME4a LINE L1 -89 6032 5830 335 314 82 14 chr20 62690157 62690364 -9463518 - L1MC4a LINE L1 -1906 5902 5682 798 101 36 0 chr20 62691833 62691971 -9461911 + CT-rich Low_complexity Low_complexity 4 146 0 251 246 177 23 chr20 62692162 62692292 -9461590 - MIR SINE MIR -1 261 112 590 247 190 0 chr20 62692332 62692506 -9461376 + MER58A DNA MER1_type 1 207 -17 2137 117 3 0 chr20 62692580 62692879 -9461003 - AluSx SINE Alu -12 300 1 32 26 0 0 chr20 62693209 62693248 -9460634 + AT_rich Low_complexity Low_complexity 1 39 0 1049 139 0 13 chr20 62693269 62693427 -9460455 - AluJb SINE Alu -16 296 141 744 154 8 23 chr20 62693693 62693823 -9460059 + FLAM_C SINE Alu 3 130 -3 2156 117 7 10 chr20 62693828 62694135 -9459747 + AluSx SINE Alu 1 306 -6 24 0 0 0 chr20 62694135 62694159 -9459723 + AT_rich Low_complexity Low_complexity 1 24 0 280 239 0 65 chr20 62694377 62694469 -9459413 - L2 LINE L2 -5 3267 3182 493 54 14 14 chr20 62694685 62694759 -9459123 + (TCCC)n Simple_repeat Simple_repeat 1 74 0 1371 161 0 5 chr20 62694774 62694992 -9458890 - AluJb SINE Alu -11 301 85 887 99 56 50 chr20 62695118 62695279 -9458603 - AluSg/x SINE Alu 0 310 149 225 295 26 0 chr20 62695441 62695519 -9458363 - MIR SINE MIR -23 239 160 2324 97 3 19 chr20 62695663 62695971 -9457911 + AluSg SINE Alu 1 303 -7 1743 109 0 21 chr20 62696057 62696131 -9457751 + AluSq SINE Alu 63 137 -176 2279 100 0 0 chr20 62696131 62696447 -9457435 + AluSc SINE Alu 1 316 0 1743 109 0 21 chr20 62696447 62696610 -9457272 + AluSq SINE Alu 137 296 -17 369 245 10 20 chr20 62696940 62697038 -9456844 - MER5A DNA MER1_type -83 106 10 869 218 62 67 chr20 62697055 62697213 -9456669 - MER58A DNA MER1_type -2196 224 66 2368 74 0 3 chr20 62697213 62697511 -9456371 - AluY SINE Alu -14 297 1 869 218 62 67 chr20 62697511 62697577 -9456305 - MER58A DNA MER1_type -2354 66 1 234 247 155 10 chr20 62697577 62697674 -9456208 - MLT1L LTR MaLR -460 155 45 2269 95 0 0 chr20 62697817 62698102 -9455780 + AluSg SINE Alu 1 285 -25 2438 93 0 3 chr20 62698147 62698458 -9455424 - AluSq SINE Alu -3 310 1 26 30 0 0 chr20 62698573 62698606 -9455276 + AT_rich Low_complexity Low_complexity 1 33 0 1386 140 8 8 chr20 62698639 62698875 -9455007 - L1MA5 LINE L1 -2 6298 6063 546 114 0 0 chr20 62699556 62699644 -9454238 + (TG)n Simple_repeat Simple_repeat 1 88 0 183 230 290 20 chr20 62699888 62699988 -9453894 + MIR SINE MIR 127 253 -9 474 191 122 0 chr20 62700481 62700596 -9453286 - MLT1C LTR MaLR -317 150 22 1447 144 0 0 chr20 62700639 62700847 -9453035 - AluSg/x SINE Alu -9 301 94 2355 98 0 3 chr20 62700921 62701226 -9452656 - AluSg SINE Alu -6 304 1 598 260 16 31 chr20 62701226 62701408 -9452474 + MER46C DNA MER2_type 154 334 -4 187 291 155 0 chr20 62701429 62701532 -9452350 - MIR SINE MIR -136 126 8 300 53 0 0 chr20 62702909 62702947 -9450935 + (TG)n Simple_repeat Simple_repeat 2 39 0 300 27 0 0 chr20 62704666 62704703 -9449179 + (TC)n Simple_repeat Simple_repeat 2 38 0 * 336 24 0 0 chr20 62704702 62704743 -9449139 + (TG)n Simple_repeat Simple_repeat 2 42 0 707 188 0 69 chr20 62704809 62704969 -9448913 - MIR SINE MIR -24 238 90 340 293 29 48 chr20 62705233 62705441 -9448441 + MIR SINE MIR 15 218 -44 2409 98 7 0 chr20 62705909 62706215 -9447667 - AluSx SINE Alu -4 308 1 1959 144 10 7 chr20 62706218 62706510 -9447372 - AluJb SINE Alu -19 293 1 467 294 25 6 chr20 62706510 62706673 -9447209 + MIR SINE MIR 92 257 -5 287 281 97 77 chr20 62707306 62707502 -9446380 - MLT1J LTR MaLR -11 500 301 2088 99 10 20 chr20 62707531 62707848 -9446034 + AluSg SINE Alu 1 310 0 2295 99 7 0 chr20 62707864 62708157 -9445725 - AluSx SINE Alu -17 295 1 230 236 0 0 chr20 62708566 62708621 -9445261 - L2 LINE L2 -1 3312 3258 213 284 302 0 chr20 62708785 62708901 -9444981 - MIR SINE MIR -9 253 103 2231 117 0 0 chr20 62708918 62709209 -9444673 - AluSx SINE Alu -21 291 1 290 292 84 19 chr20 62709453 62709629 -9444253 - L2 LINE L2 -249 3023 2840 2224 95 0 3 chr20 62709763 62710070 -9443812 - AluY SINE Alu 0 306 1 2455 50 10 3 chr20 62710072 62710373 -9443509 - AluY SINE Alu -8 303 1 1036 119 0 0 chr20 62710417 62710560 -9443322 - FLAM_C SINE Alu 0 143 1 24 0 0 0 chr20 62710803 62710827 -9443055 + AT_rich Low_complexity Low_complexity 1 24 0 2338 97 0 0 chr20 62711204 62711504 -9442378 - AluSg SINE Alu -10 300 1 412 236 93 68 chr20 62711541 62711686 -9442196 + MIR SINE MIR 6 161 -101 2260 96 23 3 chr20 62711686 62711988 -9441894 + AluSx SINE Alu 1 308 -4 412 236 93 68 chr20 62711988 62712079 -9441803 + MIR SINE MIR 161 248 -14 2274 78 42 0 chr20 62712256 62712539 -9441343 - AluSg SINE Alu -15 295 1 587 306 10 20 chr20 62712590 62712789 -9441093 - MER20 DNA MER1_type -22 197 1 1585 155 30 46 chr20 62712848 62713010 -9440872 - AluJo SINE Alu -13 299 143 2070 112 10 3 chr20 62713010 62713304 -9440578 - AluSc SINE Alu -13 296 1 1585 155 30 46 chr20 62713304 62713445 -9440437 - AluJo SINE Alu -169 143 1 2063 98 33 4 chr20 62713542 62713849 -9440033 - AluSx SINE Alu 0 315 1 448 298 146 24 chr20 62713959 62714342 -9439540 + L2 LINE L2 2876 3305 -8 2352 56 46 0 chr20 62715532 62715817 -9438065 - AluY SINE Alu -11 300 3 2410 88 0 3 chr20 62715819 62716114 -9437768 - AluSq SINE Alu -19 294 1 2127 105 3 54 chr20 62716155 62716470 -9437412 - AluSx SINE Alu -13 299 1 2108 124 10 0 chr20 62716470 62716767 -9437115 - AluSx SINE Alu -9 303 3 2244 82 0 4 chr20 62717359 62717670 -9436212 + AluSg SINE Alu 2 311 0 1378 171 31 86 chr20 62717766 62718151 -9435731 + MLT1A1 LTR MaLR 2 365 0 600 314 31 31 chr20 62718936 62719197 -9434685 + MIR SINE MIR 2 262 0 198 280 186 25 chr20 62719342 62719460 -9434422 + MIR SINE MIR 78 214 -48 27 49 0 0 chr20 62719481 62719522 -9434360 + AT_rich Low_complexity Low_complexity 1 41 0 945 176 0 0 chr20 62720194 62720347 -9433535 - AluJb SINE Alu -22 290 138 759 179 0 0 chr20 62720360 62720505 -9433377 + (CA)n Simple_repeat Simple_repeat 2 146 0 2140 132 0 0 chr20 62720507 62720796 -9433086 - AluSx SINE Alu -23 289 1 845 137 0 23 chr20 62720796 62720927 -9432955 - AluJb SINE Alu -184 128 1 472 98 0 0 chr20 62721024 62721085 -9432797 + AluSg/x SINE Alu 94 154 -156 240 241 21 71 chr20 62721114 62721188 -9432694 + L2 LINE L2 2921 2986 -327 2422 101 0 0 chr20 62721188 62721495 -9432387 - AluSc SINE Alu -2 307 1 240 241 21 71 chr20 62721495 62721561 -9432321 + L2 LINE L2 2986 3054 -259 749 204 10 82 chr20 62721680 62721886 -9431996 - MER20 DNA MER1_type -9 210 20 2312 92 0 10 chr20 62721907 62722201 -9431681 - AluSx SINE Alu -20 292 2 2213 95 0 13 chr20 62722661 62722966 -9430916 - AluSx SINE Alu -11 301 1 23 0 0 0 chr20 62723300 62723323 -9430559 + AT_rich Low_complexity Low_complexity 1 23 0 1955 129 18 0 chr20 62723404 62723725 -9430157 + AluSg SINE Alu 1 326 0 2337 107 0 0 chr20 62723762 62724060 -9429822 + AluSc SINE Alu 1 298 -11 808 207 128 11 chr20 62724286 62724465 -9429417 + MER58A DNA MER1_type 10 209 -15 227 234 31 16 chr20 62724503 62724567 -9429315 + MIR SINE MIR 31 95 -113 931 286 103 55 chr20 62724855 62725589 -9428293 + L3 LINE CR1 557 1326 -251 2448 94 3 0 chr20 62725971 62726279 -9427603 + AluSx SINE Alu 1 309 -3 517 205 94 17 chr20 62726323 62726440 -9427442 - FLAM_C SINE Alu -16 127 2 257 225 28 14 chr20 62726544 62726615 -9427267 + MLT1K LTR MaLR 512 583 -5 2010 88 95 11 chr20 62726708 62726992 -9426890 + AluSg SINE Alu 1 308 -2 328 195 119 25 chr20 62727109 62727227 -9426655 + MIR SINE MIR 67 195 -67 449 70 0 0 chr20 62727230 62727287 -9426595 - MLT1D LTR MaLR -2 503 447 1484 173 3 48 chr20 62727294 62727617 -9426265 + AluJb SINE Alu 1 310 0 1739 137 17 47 chr20 62727622 62727921 -9425961 + AluJo SINE Alu 1 290 -22 2016 138 0 0 chr20 62727951 62728255 -9425627 - AluSx SINE Alu 0 304 1 248 318 61 15 chr20 62728310 62728461 -9425421 + MIR SINE MIR 20 140 -68 2084 129 7 0 chr20 62729108 62729402 -9424480 - AluSx SINE Alu -16 296 1 2345 87 3 7 chr20 62729645 62729945 -9423937 + AluSp SINE Alu 1 299 -14 465 189 0 0 chr20 62730040 62730114 -9423768 + MER20 DNA MER1_type 146 219 0 591 297 109 37 chr20 62730171 62730548 -9423334 - L1MC4a LINE L1 -1877 5931 5528 378 229 0 66 chr20 62730846 62730877 -9423005 - Charlie8 DNA MER1_type -153 177 146 2299 96 10 6 chr20 62730877 62731189 -9422693 - AluSp SINE Alu 0 313 1 2152 132 6 3 chr20 62731189 62731500 -9422382 - AluJo SINE Alu 0 312 1 378 229 0 66 chr20 62731500 62731589 -9422293 - Charlie8 DNA MER1_type -182 148 64 1184 199 29 18 chr20 62731590 62731628 -9422254 - L1MB4 LINE L1 -306 5874 5838 2034 118 31 0 chr20 62731628 62731915 -9421967 - AluSx SINE Alu -10 302 7 1184 199 29 18 chr20 62731915 62732153 -9421729 - L1MB4 LINE L1 -342 5838 5595 2166 90 0 21 chr20 62732484 62732801 -9421081 + AluSq SINE Alu 1 311 0 2083 145 0 0 chr20 62732803 62733100 -9420782 + AluSx SINE Alu 1 297 -15 203 196 109 0 chr20 62733282 62733328 -9420554 - MIR SINE MIR -189 73 23 680 281 76 15 chr20 62733442 62733797 -9420085 - L1MC/D LINE L1 -383 5738 5439 2394 219 19 84 chr20 62733828 62733880 -9420002 + L1ME1 LINE L1 5466 5520 -646 1942 147 10 10 chr20 62733880 62734172 -9419710 + AluSx SINE Alu 1 292 -20 2310 103 3 0 chr20 62734180 62734480 -9419402 + AluSp SINE Alu 11 311 -2 2394 219 19 84 chr20 62734480 62735165 -9418717 + L1ME1 LINE L1 5527 6163 -3 1946 174 0 0 chr20 62735189 62735493 -9418389 + AluJb SINE Alu 1 304 -8 1608 186 47 32 chr20 62735505 62735594 -9418288 - MER2 DNA MER2_type 0 344 258 2397 81 0 7 chr20 62735594 62735891 -9417991 + AluSp SINE Alu 2 296 -17 1608 186 47 32 chr20 62735891 62736044 -9417838 - MER2 DNA MER2_type -86 258 93 1484 195 0 0 chr20 62736044 62736306 -9417576 - AluJb SINE Alu -13 299 38 1608 186 47 32 chr20 62736306 62736401 -9417481 - MER2 DNA MER2_type -251 93 1 256 366 30 50 chr20 62737096 62737298 -9416584 - MIR SINE MIR -49 213 16 1251 132 30 0 chr20 62737584 62737781 -9416101 - MER20 DNA MER1_type -4 215 13 2347 92 3 0 chr20 62738050 62738343 -9415539 - AluSp SINE Alu -19 294 1 363 301 22 23 chr20 62738352 62738559 -9415323 - MIR SINE MIR -10 252 45 301 309 119 25 chr20 62738586 62738871 -9415011 - L1ME4a LINE L1 -8 6113 5802 1648 177 3 7 chr20 62738887 62739170 -9414712 + AluJo SINE Alu 3 284 -28 249 33 0 0 chr20 62739170 62739200 -9414682 + (TGAA)n Simple_repeat Simple_repeat 3 32 0 201 213 0 0 chr20 62739274 62739321 -9414561 + CT-rich Low_complexity Low_complexity 1 47 0 296 245 43 21 chr20 62739404 62739498 -9414384 - L1ME4a LINE L1 -500 5621 5526 457 125 0 0 chr20 62739563 62739627 -9414255 + AluS SINE Alu 2 65 -248 7063 172 23 23 chr20 62739629 62739990 -9413892 + L1 LINE L1 2696 3056 -3090 2254 125 0 0 chr20 62739990 62740295 -9413587 + AluSx SINE Alu 1 305 -7 7063 172 23 23 chr20 62740295 62741390 -9412492 + L1 LINE L1 3056 4151 -1995 2014 169 107 17 chr20 62741394 62741797 -9412085 - LTR51 LTR ERV1 -232 439 1 2316 80 0 26 chr20 62742010 62742321 -9411561 - AluY SINE Alu -8 303 1 325 265 61 38 chr20 62742741 62742873 -9411009 - L2 LINE L2 -2 3270 3136 1792 158 136 17 chr20 62742879 62743233 -9410649 - MSTD LTR MaLR 0 396 1 2459 66 0 3 chr20 62743456 62743758 -9410124 + AluY SINE Alu 1 301 -10 2101 134 0 10 chr20 62744060 62744374 -9409508 - AluSx SINE Alu -1 311 1 2317 91 3 3 chr20 62744379 62744675 -9409207 - AluSg1 SINE Alu -13 296 1 295 266 119 9 chr20 62744901 62745010 -9408872 - MIR SINE MIR -34 228 108 2138 117 3 3 chr20 62745235 62745534 -9408348 - AluSx SINE Alu -13 299 1 390 324 23 6 chr20 62745585 62745761 -9408121 + MIR SINE MIR 49 227 -35 1722 132 29 36 chr20 62746200 62746480 -9407402 - AluJb SINE Alu -9 303 26 389 311 21 22 chr20 62746481 62746719 -9407163 + L1ME4a LINE L1 5707 5944 -202 348 98 0 0 chr20 62746944 62746995 -9406887 - L1PA16 LINE L1 0 6166 6116 238 174 0 22 chr20 62747778 62747824 -9406058 - MIR SINE MIR -1 261 217 258 143 0 0 chr20 62747857 62747899 -9405983 - MIR SINE MIR 0 262 221 2225 99 0 0 chr20 62747899 62748208 -9405674 - AluSx SINE Alu 0 309 1 823 167 10 56 chr20 62748310 62748508 -9405374 + MER53 DNA DNA 1 189 0 382 223 48 0 chr20 62748637 62748740 -9405142 - MIR SINE MIR -111 151 44 2607 43 0 13 chr20 62748761 62749066 -9404816 + AluY SINE Alu 1 301 -10 688 291 106 35 chr20 62749108 62749171 -9404711 - L2 LINE L2 -38 3275 3218 540 0 0 0 chr20 62749171 62749231 -9404651 + (TA)n Simple_repeat Simple_repeat 2 61 0 688 291 106 35 chr20 62749231 62749712 -9404170 - L2 LINE L2 -95 3218 2712 344 248 34 43 chr20 62749671 62749788 -9404094 + MIR SINE MIR 72 187 -75 * 1742 163 0 77 chr20 62749853 62750191 -9403691 - AluJb SINE Alu 0 312 1 189 0 0 0 chr20 62750194 62750215 -9403667 + (TTTAA)n Simple_repeat Simple_repeat 5 25 0 198 0 0 0 chr20 62750216 62750238 -9403644 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 1797 155 22 7 chr20 62750240 62750518 -9403364 - AluJb SINE Alu -30 282 1 304 266 64 28 chr20 62750685 62750794 -9403088 - L2 LINE L2 0 3272 3160 595 290 49 37 chr20 62750815 62751060 -9402822 + Charlie8 DNA MER1_type 13 260 -2157 1765 148 6 53 chr20 62751927 62752075 -9401807 + AluJo SINE Alu 1 128 -184 2336 103 0 0 chr20 62752075 62752376 -9401506 + AluSg SINE Alu 1 301 -9 1765 148 6 53 chr20 62752376 62752545 -9401337 + AluJo SINE Alu 128 303 -9 1792 189 3 0 chr20 62752795 62753091 -9400791 + AluJo SINE Alu 5 301 -11 249 139 0 0 chr20 62753091 62753134 -9400748 + (GGGA)n Simple_repeat Simple_repeat 1 43 0 2058 64 12 0 chr20 62753173 62753424 -9400458 + AluY SINE Alu 39 292 -19 746 133 37 15 chr20 62753471 62753606 -9400276 + MER63 DNA MER1_type 914 1051 -9 372 299 0 52 chr20 62753763 62753917 -9399965 + L2 LINE L2 3168 3313 0 2185 130 13 0 chr20 62753918 62754226 -9399656 + AluSx SINE Alu 1 312 0 1256 236 96 9 chr20 62754375 62754718 -9399164 - Charlie4a DNA MER1_type -16 492 120 2210 124 0 0 chr20 62754729 62755035 -9398847 + AluSg SINE Alu 1 306 -4 419 263 59 53 chr20 62755226 62755432 -9398450 + MIR SINE MIR 6 226 -36 362 333 8 0 chr20 62755777 62755906 -9397976 - MER94 DNA DNA 0 134 5 1577 164 20 30 chr20 62756195 62756494 -9397388 + AluJo SINE Alu 3 298 -14 324 336 28 7 chr20 62756504 62756646 -9397236 - MIR SINE MIR -75 133 39 2404 97 0 0 chr20 62757046 62757346 -9396536 - AluSc SINE Alu -9 300 1 3406 178 24 9 chr20 62757532 62758202 -9395680 + L1MB8 LINE L1 5498 6177 -1 2296 183 16 2 chr20 62758248 62758313 -9395569 - MSTB1 LTR MaLR 0 432 369 1656 174 0 0 chr20 62758313 62758572 -9395310 + AluJo SINE Alu 39 297 -15 2296 183 16 2 chr20 62758572 62758932 -9394950 - MSTB1 LTR MaLR -63 369 1 1815 144 30 0 chr20 62758941 62759211 -9394671 + AluSx SINE Alu 6 283 -29 960 183 6 0 chr20 62759303 62759472 -9394410 - AluJb SINE Alu -3 309 140 556 191 9 18 chr20 62759644 62759754 -9394128 - MER63 DNA MER1_type -8 1052 944 22 56 0 0 chr20 62759754 62759790 -9394092 + AT_rich Low_complexity Low_complexity 1 36 0 1491 172 72 4 chr20 62759797 62760059 -9393823 - AluJo SINE Alu -32 280 1 2375 80 0 16 chr20 62760099 62760413 -9393469 + AluSq SINE Alu 2 310 -3 1120 182 55 110 chr20 62760413 62760751 -9393131 + L1MB4 LINE L1 5852 6172 -8 2574 57 0 0 chr20 62760772 62761070 -9392812 + AluY SINE Alu 1 298 -13 1647 171 7 27 chr20 62761088 62761380 -9392502 + AluJo SINE Alu 13 298 -14 1890 66 0 0 chr20 62761381 62761625 -9392257 + L1MA1 LINE L1 6059 6302 0 544 202 85 53 chr20 62761631 62761819 -9392063 - MER63 DNA MER1_type -112 948 755 319 303 96 62 chr20 62761822 62761980 -9391902 - L2 LINE L2 -281 3032 2864 2075 133 0 3 chr20 62761980 62762274 -9391608 + AluSx SINE Alu 6 298 -14 319 303 96 62 chr20 62762274 62762323 -9391559 - L2 LINE L2 -449 2864 2818 223 250 94 67 chr20 62762861 62762927 -9390955 - MIR SINE MIR -13 249 186 2108 138 0 3 chr20 62762927 62763223 -9390659 - AluSg SINE Alu -15 295 1 223 250 94 67 chr20 62763223 62763336 -9390546 - MIR SINE MIR -76 186 65 1682 258 53 61 chr20 62763356 62763898 -9389984 - MLT1H LTR MaLR 0 549 12 1940 229 48 41 chr20 62764000 62764564 -9389318 + L1ME2 LINE L1 5563 6130 -34 2233 108 0 3 chr20 62764565 62764860 -9389022 + AluSq SINE Alu 1 294 -19 261 0 0 0 chr20 62764863 62764892 -9388990 + (TAAA)n Simple_repeat Simple_repeat 2 30 0 2250 109 0 13 chr20 62764994 62765306 -9388576 + AluSg SINE Alu 1 308 -2 524 229 8 16 chr20 62766014 62766136 -9387746 - MLT1H LTR MaLR -389 160 40 1975 151 0 7 chr20 62766166 62766465 -9387417 + AluSx SINE Alu 7 303 -9 286 237 62 10 chr20 62766526 62766623 -9387259 - MIR SINE MIR -44 218 117 182 194 0 0 chr20 62767826 62767862 -9386020 + MIR SINE MIR 109 144 -118 296 246 116 80 chr20 62769152 62769290 -9384592 + MLT1H LTR MaLR 404 546 -3 874 291 17 0 chr20 62769658 62769899 -9383983 - MIR SINE MIR -2 260 16 1847 133 56 3 chr20 62770054 62770165 -9383717 + AluSx SINE Alu 4 108 -204 1607 17 0 0 chr20 62770165 62770371 -9383511 + SVA Other Other 1204 1386 0 1847 133 56 3 chr20 62770371 62770544 -9383338 + AluSx SINE Alu 108 303 -9 284 286 79 29 chr20 62770557 62770697 -9383185 - L2 LINE L2 -244 3069 2923 697 253 81 0 chr20 62770797 62770971 -9382911 - MER58B DNA MER1_type -4 337 150 1928 162 3 0 chr20 62771066 62771362 -9382520 - AluSx SINE Alu -15 297 1 1790 217 7 20 chr20 62771438 62771880 -9382002 + MER69 DNA AcHobo 1731 2166 -360 1496 180 47 18 chr20 62771880 62772158 -9381724 + AluJo SINE Alu 2 287 -25 442 227 78 19 chr20 62772159 62772313 -9381569 + MER69 DNA AcHobo 2128 2290 -236 1076 88 0 0 chr20 62772316 62772453 -9381429 + AluSg/x SINE Alu 152 288 -22 576 197 111 35 chr20 62772453 62772651 -9381231 + MER69 DNA AcHobo 2297 2509 -17 1879 233 109 15 chr20 62772732 62773200 -9380682 + MLT1F1 LTR MaLR 4 515 -52 24 32 0 0 chr20 62773219 62773250 -9380632 + AT_rich Low_complexity Low_complexity 1 31 0 314 191 15 0 chr20 62773255 62773323 -9380559 + MLT1F1 LTR MaLR 474 542 0 494 102 6 3 chr20 62773399 62773498 -9380384 + L1PB1 LINE L1 5568 5668 -483 1257 112 11 6 chr20 62773499 62773677 -9380205 + AluSg/x SINE Alu 125 303 -9 857 111 16 0 chr20 62773677 62773803 -9380079 + L1PB1 LINE L1 5664 5791 -360 350 152 0 51 chr20 62773803 62773941 -9379941 + (TA)n Simple_repeat Simple_repeat 1 131 0 2672 86 0 11 chr20 62773944 62774315 -9379567 + L1PB1 LINE L1 5785 6151 0 233 315 37 9 chr20 62774350 62774458 -9379424 - L2 LINE L2 0 3313 3203 255 286 13 0 chr20 62774698 62774775 -9379107 - MIR SINE MIR -16 246 169 190 171 0 24 chr20 62775580 62775621 -9378261 - L2 LINE L2 -9 3304 3265 422 170 111 67 chr20 62775677 62775812 -9378070 - MIR SINE MIR -117 145 5 527 225 14 29 chr20 62775969 62776107 -9377775 + MIR SINE MIR 57 192 -70 3405 156 41 72 chr20 62776168 62776881 -9377001 + LTR8 LTR ERV1 1 691 0 2351 106 0 3 chr20 62777089 62777401 -9376481 + AluSx SINE Alu 1 311 -1 11393 32 12 59 chr20 62777582 62779032 -9374850 - SVA Other Other -2 1384 2 183 80 0 0 chr20 62779037 62779062 -9374820 + (GGGAGA)n Simple_repeat Simple_repeat 1 25 0 775 97 8 8 chr20 62779073 62779197 -9374685 + (TTCC)n Simple_repeat Simple_repeat 1 124 0 198 0 0 0 chr20 62779199 62779221 -9374661 + (TCCCC)n Simple_repeat Simple_repeat 4 25 0 1524 254 112 32 chr20 62779331 62779866 -9374016 + MLT1E LTR MaLR 1 578 -15 289 362 34 0 chr20 62779898 62780047 -9373835 + MIR3 SINE MIR 6 159 -49 2346 91 3 3 chr20 62780060 62780357 -9373525 + AluSx SINE Alu 2 298 -14 584 285 63 19 chr20 62780360 62780567 -9373315 + MER102a DNA MER1_type 115 330 0 1018 298 90 6 chr20 62780667 62780999 -9372883 - LTR16B LTR ERVL -92 372 13 607 200 85 43 chr20 62781117 62781321 -9372561 + L1M4 LINE L1 5092 5309 -837 2356 106 3 0 chr20 62781321 62781632 -9372250 + AluSq SINE Alu 1 312 -1 607 200 85 43 chr20 62781632 62781662 -9372220 + L1M4 LINE L1 5309 5336 -810 2130 134 0 0 chr20 62781663 62781961 -9371921 + AluSx SINE Alu 1 298 -14 325 163 33 2 chr20 62781963 62782041 -9371841 + L1ME1 LINE L1 6083 6148 -18 365 325 34 39 chr20 62782295 62782501 -9371381 + MIR SINE MIR 6 210 -52 2362 81 3 13 chr20 62782541 62782849 -9371033 - AluSg1 SINE Alu -3 306 2 282 256 93 0 chr20 62782952 62783038 -9370844 - MIR SINE MIR -113 149 56 403 244 58 87 chr20 62783279 62783425 -9370457 - MER106A DNA MER1_type -1 235 86 2440 74 0 7 chr20 62783425 62783722 -9370160 - AluSq SINE Alu -17 296 2 432 0 0 0 chr20 62783722 62783770 -9370112 + (TAGA)n Simple_repeat Simple_repeat 2 49 0 2368 73 17 23 chr20 62783770 62784070 -9369812 - AluSx SINE Alu -14 298 1 403 244 58 87 chr20 62784070 62784163 -9369719 - MER106A DNA MER1_type -147 89 1 265 282 18 45 chr20 62784705 62784815 -9369067 - MIR SINE MIR -119 143 37 293 329 48 30 chr20 62785425 62785632 -9368250 - MIR SINE MIR -51 211 2 207 0 0 0 chr20 62785736 62785759 -9368123 + (GAAAA)n Simple_repeat Simple_repeat 2 24 0 1302 204 46 62 chr20 62785815 62786053 -9367829 + L1MCa LINE L1 19 252 -6174 1826 71 4 0 chr20 62786053 62786279 -9367603 + AluSp SINE Alu 73 299 -14 1302 204 46 62 chr20 62786279 62786364 -9367518 + L1MCa LINE L1 252 337 -6089 * 3967 138 13 34 chr20 62786344 62787119 -9366763 + L1MC1 LINE L1 5152 5908 -425 1939 141 0 3 chr20 62787119 62787402 -9366480 + AluSx SINE Alu 21 302 -10 15307 119 24 30 chr20 62787405 62787975 -9365907 - Tigger1 DNA MER2_type 0 2418 1846 2034 141 7 0 chr20 62787975 62788279 -9365603 - AluSx SINE Alu -6 306 1 15307 119 24 30 chr20 62788279 62789240 -9364642 - Tigger1 DNA MER2_type -572 1846 905 2375 108 0 0 chr20 62789240 62789545 -9364337 - AluSg SINE Alu -5 305 1 15307 119 24 30 chr20 62789545 62790445 -9363437 - Tigger1 DNA MER2_type -1513 905 1 866 190 40 67 chr20 62790491 62790744 -9363138 - L1MB8 LINE L1 -1 6177 5932 1840 156 33 10 chr20 62790747 62791049 -9362833 - AluJo SINE Alu -3 309 1 21 36 0 0 chr20 62791049 62791077 -9362805 + AT_rich Low_complexity Low_complexity 1 28 0 928 115 0 29 chr20 62791083 62791222 -9362660 - AluJo SINE Alu -177 135 1 21 36 0 0 chr20 62791222 62791250 -9362632 + AT_rich Low_complexity Low_complexity 1 28 0 920 93 0 31 chr20 62791256 62791385 -9362497 - AluJo SINE Alu -177 135 11 1404 158 35 0 chr20 62791397 62791413 -9362469 - L1MB8 LINE L1 -242 5942 5927 338 337 36 11 chr20 62791413 62791692 -9362190 - L1PA6 LINE L1 -229 5925 5640 247 294 34 68 chr20 62792080 62792226 -9361656 + MIR SINE MIR 60 200 -62 213 108 0 0 chr20 62792264 62792301 -9361581 + (TAG)n Simple_repeat Simple_repeat 2 38 0 2036 141 0 7 chr20 62792301 62792591 -9361291 - AluSx SINE Alu -24 288 1 200 163 47 0 chr20 62792763 62792806 -9361076 + GA-rich Low_complexity Low_complexity 3 47 0 270 137 0 0 chr20 62793280 62793331 -9360551 + L2 LINE L2 3181 3231 -41 289 276 0 13 chr20 62793341 62793417 -9360465 + GA-rich Low_complexity Low_complexity 3 77 0 854 108 0 0 chr20 62793417 62793537 -9360345 - AluSp/q SINE Alu -6 307 188 1863 68 0 0 chr20 62793537 62793756 -9360126 - AluSp SINE Alu -94 219 1 1951 116 0 15 chr20 62793762 62794030 -9359852 - AluSx SINE Alu -20 292 29 275 0 29 0 chr20 62794148 62794183 -9359699 + (TG)n Simple_repeat Simple_repeat 2 37 0 235 307 88 80 chr20 62794194 62794331 -9359551 + MIR SINE MIR 12 149 -113 674 128 34 0 chr20 62794331 62794448 -9359434 + AluSg/x SINE Alu 188 308 -4 26 0 0 0 chr20 62794448 62794474 -9359408 + AT_rich Low_complexity Low_complexity 1 26 0 1704 97 0 0 chr20 62794485 62794701 -9359181 + AluSc SINE Alu 1 216 -93 186 43 0 0 chr20 62794706 62794729 -9359153 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 507 212 53 0 chr20 62794771 62794884 -9358998 + L1PB4 LINE L1 6037 6155 -1 865 146 6 12 chr20 62794934 62795105 -9358777 + GA-rich Low_complexity Low_complexity 2 171 0 442 114 25 0 chr20 62795103 62795182 -9358700 + A-rich Low_complexity Low_complexity 1 81 0 * 326 344 61 23 chr20 62795397 62795659 -9358223 - L2 LINE L2 -1 3312 3041 629 212 53 0 chr20 62795659 62795791 -9358091 + MER68 LTR ERV1 1 139 -423 1912 118 45 17 chr20 62795809 62796098 -9357784 - AluSx SINE Alu -15 297 1 2374 91 0 7 chr20 62796265 62796572 -9357310 - AluY SINE Alu -6 305 1 251 173 40 13 chr20 62796691 62796766 -9357116 + T-rich Low_complexity Low_complexity 1 77 0 2051 207 56 0 chr20 62796894 62797304 -9356578 + MER68 LTR ERV1 130 562 0 422 332 28 77 chr20 62797304 62797455 -9356427 - L2 LINE L2 -268 3045 2888 2367 55 0 62 chr20 62797455 62797764 -9356118 + AluSc SINE Alu 1 290 -19 422 332 28 77 chr20 62797764 62797950 -9355932 - L2 LINE L2 -425 2888 2725 1963 138 3 45 chr20 62797957 62798269 -9355613 + AluSx SINE Alu 1 299 -13 23 0 0 0 chr20 62798320 62798343 -9355539 + AT_rich Low_complexity Low_complexity 1 23 0 297 75 0 0 chr20 62798466 62798506 -9355376 + (GA)n Simple_repeat Simple_repeat 2 41 0 285 345 81 15 chr20 62798897 62799094 -9354788 + L2 LINE L2 2869 3078 -194 293 68 0 0 chr20 62799131 62799175 -9354707 + MADE1 DNA Mariner 1 44 -36 2373 154 73 5 chr20 62799282 62799705 -9354177 + LTR47A LTR ERVL 1 452 0 623 234 27 38 chr20 62799715 62799743 -9354139 - MIR SINE MIR -73 189 162 2170 114 90 3 chr20 62799743 62800077 -9353805 + THE1B LTR MaLR 1 363 -1 623 234 27 38 chr20 62800077 62800232 -9353650 - MIR SINE MIR -100 162 8 203 226 130 61 chr20 62800258 62800373 -9353509 + L2 LINE L2 3138 3260 -12 308 227 58 84 chr20 62800843 62800891 -9352991 - L2 LINE L2 -74 3239 3191 1544 172 9 21 chr20 62800891 62801133 -9352749 + MER33 DNA MER1_type 4 243 -2342 1953 158 0 19 chr20 62801133 62801449 -9352433 - AluJb SINE Alu -2 310 1 1544 172 9 21 chr20 62801449 62801531 -9352351 + MER33 DNA MER1_type 243 324 0 308 227 58 84 chr20 62801531 62801707 -9352175 - L2 LINE L2 -122 3191 3021 1866 122 0 0 chr20 62801723 62801968 -9351914 + AluSx SINE Alu 1 245 -67 198 0 0 0 chr20 62801974 62801996 -9351886 + (A)n Simple_repeat Simple_repeat 1 22 0 379 175 10 21 chr20 62805013 62805110 -9348772 + GA-rich Low_complexity Low_complexity 3 98 0 2368 141 55 20 chr20 62805360 62805765 -9348117 + MSTC LTR MaLR 1 358 -7 1752 170 3 19 chr20 62806062 62806373 -9347509 - AluJo SINE Alu -2 310 5 1142 177 14 32 chr20 62806422 62806642 -9347240 + MER20 DNA MER1_type 2 217 -2 1828 91 19 0 chr20 62807489 62807752 -9346130 - L1PB2 LINE L1 -2 6149 5882 185 200 22 0 chr20 62807805 62807850 -9346032 + L2 LINE L2 2304 2349 -965 547 268 26 11 chr20 62807868 62808058 -9345824 + L1MEc LINE L1 284 476 -5920 25 65 0 0 chr20 62808072 62808118 -9345764 + AT_rich Low_complexity Low_complexity 1 46 0 1179 196 45 26 chr20 62808226 62808492 -9345390 + L1MEc LINE L1 547 817 -5579 847 142 0 8 chr20 62808494 62808621 -9345261 - FLAM_C SINE Alu -17 126 1 2267 84 0 13 chr20 62808654 62808977 -9344905 + AluY SINE Alu 1 311 0 341 210 31 31 chr20 62809010 62809135 -9344747 + MLT1H1 LTR MaLR 436 553 -2 692 297 28 48 chr20 62809139 62809533 -9344349 + L2 LINE L2 2592 2977 -337 1230 148 168 31 chr20 62809550 62809806 -9344076 - AluJb SINE Alu -11 291 1 501 270 53 0 chr20 62809972 62810124 -9343758 + L1ME3A LINE L1 6010 6169 -1 2204 113 3 10 chr20 62810126 62810428 -9343454 + AluSx SINE Alu 1 300 -12 2267 107 0 3 chr20 62810486 62810776 -9343106 + AluSx SINE Alu 1 289 -23 301 310 69 35 chr20 62811110 62811228 -9342654 + L1ME4a LINE L1 5718 5843 -278 2363 97 7 3 chr20 62811228 62811537 -9342345 + AluSq SINE Alu 1 310 -3 301 310 69 35 chr20 62811537 62811563 -9342319 + L1ME4a LINE L1 5843 5867 -254 2139 132 0 3 chr20 62811589 62811885 -9341997 - AluSq SINE Alu -18 295 1 924 162 7 7 chr20 62811914 62812062 -9341820 + MER2 DNA MER2_type 1 148 -197 495 155 52 52 chr20 62812073 62812189 -9341693 + L1M1 LINE L1 20 135 -7430 * 15532 149 35 10 chr20 62812183 62813306 -9340576 + L1M1 LINE L1 1103 2197 -5368 1979 172 0 0 chr20 62813306 62813614 -9340268 + AluJb SINE Alu 2 309 -3 15532 149 35 10 chr20 62813614 62815002 -9338880 + L1M1 LINE L1 2197 3549 -4016 2273 96 3 10 chr20 62815002 62815316 -9338566 + AluSx SINE Alu 1 312 0 15532 149 35 10 chr20 62815316 62816092 -9337790 + L1M1 LINE L1 3549 4477 -3088 2254 125 0 0 chr20 62816092 62816397 -9337485 + AluSx SINE Alu 1 305 -7 15532 149 35 10 chr20 62816397 62816417 -9337465 + L1M1 LINE L1 4477 4495 -3070 216 0 0 0 chr20 62817115 62817139 -9336743 + (TC)n Simple_repeat Simple_repeat 1 24 0 378 263 158 0 chr20 62818742 62818875 -9335007 - MER20 DNA MER1_type -6 213 60 585 227 8 0 chr20 62818886 62819005 -9334877 + FLAM_A SINE Alu 1 120 -13 324 94 113 0 chr20 62819005 62819164 -9334718 + (TA)n Simple_repeat Simple_repeat 2 178 0 * 338 121 83 0 chr20 62819129 62819286 -9334596 + (TTATA)n Simple_repeat Simple_repeat 5 174 0 361 65 117 12 chr20 62819309 62819641 -9334241 + (TA)n Simple_repeat Simple_repeat 1 366 0 301 73 52 64 chr20 62819657 62819916 -9333966 + (TA)n Simple_repeat Simple_repeat 1 255 0 28 48 0 0 chr20 62819933 62819975 -9333907 + AT_rich Low_complexity Low_complexity 1 42 0 1241 151 73 5 chr20 62819980 62820186 -9333696 + AluJb SINE Alu 86 305 -7 442 259 154 83 chr20 62821096 62821459 -9332423 + L2 LINE L2 2920 3308 -5 1971 104 71 0 chr20 62821777 62822045 -9331837 + AluSg SINE Alu 9 295 -15 228 283 104 9 chr20 62822565 62822671 -9331211 - MIR SINE MIR -44 218 103 472 192 0 0 chr20 62823173 62823272 -9330610 + L1MB8 LINE L1 6079 6177 -1 293 0 27 0 chr20 62823364 62823401 -9330481 + (TG)n Simple_repeat Simple_repeat 2 39 0 369 131 0 0 chr20 62823770 62823831 -9330051 + (GA)n Simple_repeat Simple_repeat 1 61 0 1350 198 60 14 chr20 62824280 62824563 -9329319 - AluJo SINE Alu -16 296 1 2283 112 0 0 chr20 62824574 62824870 -9329012 - AluSg SINE Alu -14 296 1 232 275 153 84 chr20 62826504 62826796 -9327086 + L2 LINE L2 2422 2693 -620 2249 87 11 3 chr20 62826796 62827082 -9326800 - AluSx SINE Alu -24 288 1 232 275 153 84 chr20 62827082 62827539 -9326343 + L2 LINE L2 2693 3241 -72 538 282 145 49 chr20 62827638 62828243 -9325639 + L2 LINE L2 2379 3086 -227 1671 179 0 4 chr20 62828243 62828523 -9325359 + AluJb SINE Alu 1 279 -33 538 282 145 49 chr20 62828523 62828775 -9325107 + L2 LINE L2 3086 3312 -1 336 328 34 73 chr20 62828875 62829232 -9324650 - L2 LINE L2 0 3272 2930 366 298 64 23 chr20 62829738 62829909 -9323973 - MIR SINE MIR -80 182 5 2258 85 0 0 chr20 62830074 62830379 -9323503 + AluSx SINE Alu 1 305 0 234 81 0 0 chr20 62830501 62830538 -9323344 + (CAGA)n Simple_repeat Simple_repeat 2 38 0 184 254 0 75 chr20 62831048 62831115 -9322767 + L2 LINE L2 3211 3272 0 2034 108 34 10 chr20 62831287 62831583 -9322299 + AluSx SINE Alu 1 303 -9 2187 94 23 17 chr20 62831585 62831884 -9321998 + AluY SINE Alu 3 303 -8 22 0 0 0 chr20 62832466 62832488 -9321394 + AT_rich Low_complexity Low_complexity 1 22 0 194 317 0 0 chr20 62832583 62832643 -9321239 + MIR SINE MIR 47 106 -156 6900 109 6 46 chr20 62832681 62833723 -9320159 - L1MA2 LINE L1 0 6304 5311 1687 139 49 21 chr20 62833723 62834011 -9319871 - AluJb SINE Alu -16 296 1 6900 109 6 46 chr20 62834011 62834183 -9319699 - L1MA2 LINE L1 -993 5311 5134 431 234 12 66 chr20 62834190 62834357 -9319525 + MIR SINE MIR 99 256 -6 1831 131 35 31 chr20 62834486 62834776 -9319106 + AluSx SINE Alu 2 292 -20 260 267 109 10 chr20 62834783 62834884 -9318998 + MIR SINE MIR 20 130 -78 180 274 151 0 chr20 62835080 62835153 -9318729 - L2 LINE L2 0 3272 3189 333 0 0 0 chr20 62835296 62835333 -9318549 + (CA)n Simple_repeat Simple_repeat 2 38 0 414 320 82 8 chr20 62835681 62835925 -9317957 + MIR SINE MIR 1 262 0 191 253 137 11 chr20 62836023 62836118 -9317764 + L2 LINE L2 2946 3052 -261 486 244 92 12 chr20 62836124 62836222 -9317660 - MER5B DNA MER1_type 0 178 60 2395 79 0 0 chr20 62836222 62836512 -9317370 - AluSc SINE Alu -18 291 2 486 244 92 12 chr20 62836512 62836577 -9317305 - MER5B DNA MER1_type -118 60 2 897 218 25 30 chr20 62836591 62836793 -9317089 + MIR SINE MIR 2 202 -60 2279 118 6 41 chr20 62836828 62837191 -9316691 + MER4B LTR ERV1 6 355 -255 309 51 0 0 chr20 62837207 62837246 -9316636 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 2255 89 0 0 chr20 62837249 62837531 -9316351 - AluSq SINE Alu -31 282 1 234 167 74 0 chr20 62837601 62837655 -9316227 - MIR SINE MIR -60 202 145 1293 178 27 0 chr20 62837686 62837911 -9315971 + MER4E LTR ERV1 536 766 0 22 0 0 0 chr20 62837937 62837959 -9315923 + AT_rich Low_complexity Low_complexity 1 22 0 3131 162 55 31 chr20 62837961 62838028 -9315854 - L1MB4 LINE L1 -1 6179 6115 2361 41 45 3 chr20 62838028 62838318 -9315564 + AluY SINE Alu 1 302 -9 3131 162 55 31 chr20 62838318 62838752 -9315130 - L1MB4 LINE L1 -65 6115 5655 2261 111 0 0 chr20 62838752 62839050 -9314832 + AluSx SINE Alu 1 298 -14 3131 162 55 31 chr20 62839050 62839225 -9314657 - L1MB4 LINE L1 -525 5655 5486 1661 208 18 18 chr20 62839386 62839727 -9314155 + MER58B DNA MER1_type 1 341 0 602 219 78 5 chr20 62839830 62840035 -9313847 + L1ME2 LINE L1 4966 5185 -961 1182 187 50 5 chr20 62840043 62840241 -9313641 + MER8 DNA MER2_type 33 239 0 479 143 143 15 chr20 62840241 62840374 -9313508 + L1ME2 LINE L1 5184 5333 -813 2071 200 109 75 chr20 62840378 62840688 -9313194 + L1ME2 LINE L1 5416 5714 -450 2157 134 0 0 chr20 62840688 62840987 -9312895 - AluSx SINE Alu -13 299 1 2071 200 109 75 chr20 62840987 62841400 -9312482 + L1ME2 LINE L1 5714 6164 0 2038 202 32 49 chr20 62841973 62842479 -9311403 - MLT1D LTR MaLR 0 505 9 395 323 36 24 chr20 62842668 62842835 -9311047 - MIR SINE MIR -71 191 23 2335 113 0 0 chr20 62842999 62843301 -9310581 + AluSx SINE Alu 1 302 -10 792 95 22 15 chr20 62843335 62843472 -9310410 + (TCCCC)n Simple_repeat Simple_repeat 2 139 0 261 369 41 20 chr20 62843502 62843697 -9310185 + MIR SINE MIR 12 210 -52 360 0 0 0 chr20 62843832 62843872 -9310010 + (CA)n Simple_repeat Simple_repeat 2 41 0 472 260 100 15 chr20 62844117 62844317 -9309565 + MER113 DNA MER1_type? 1 217 -304 1187 99 12 0 chr20 62844342 62844514 -9309368 - L1PA15 LINE L1 -5 6160 5987 2445 92 0 0 chr20 62844555 62844860 -9309022 + AluSx SINE Alu 1 305 -7 907 162 11 17 chr20 62844988 62845167 -9308715 - AluJo SINE Alu -14 298 121 183 191 24 0 chr20 62845179 62845221 -9308661 + MIR SINE MIR 103 145 -117 1982 138 24 3 chr20 62845233 62845523 -9308359 + AluJo SINE Alu 7 302 -10 208 217 133 12 chr20 62845650 62845733 -9308149 - MIR SINE MIR -130 132 40 674 288 68 0 chr20 62845852 62846071 -9307811 - MIR SINE MIR -13 249 16 2282 111 3 0 chr20 62846541 62846839 -9307043 - AluSx SINE Alu -13 299 1 269 219 27 14 chr20 62846982 62847055 -9306827 - MER46C DNA MER2_type 0 338 265 239 250 0 0 chr20 62847083 62847147 -9306735 - MER46C DNA MER2_type -146 192 129 936 154 30 120 chr20 62847392 62847626 -9306256 + MER20 DNA MER1_type 1 213 -6 24 77 0 0 chr20 62847666 62847718 -9306164 + AT_rich Low_complexity Low_complexity 1 52 0 633 265 83 48 chr20 62847770 62848121 -9305761 - L1ME4a LINE L1 -216 5905 5543 2318 94 0 3 chr20 62848179 62848477 -9305405 + AluSc SINE Alu 1 297 -12 699 236 96 0 chr20 62849253 62849431 -9304451 - MER58A DNA MER1_type -24 200 6 299 291 109 30 chr20 62849490 62849655 -9304227 + MIR SINE MIR 49 226 -36 653 235 102 68 chr20 62849841 62850194 -9303688 - LTR16A1 LTR ERVL -9 448 84 586 245 39 0 chr20 62850631 62850786 -9303096 + MIR SINE MIR 49 209 -53 393 136 86 0 chr20 62850892 62850973 -9302909 + MER113 DNA MER1_type? 2 89 -432 25 31 0 0 chr20 62852110 62852142 -9301740 + AT_rich Low_complexity Low_complexity 1 32 0 1141 272 18 48 chr20 62853050 62853135 -9300747 + MLT1K LTR MaLR 203 289 -299 501 17 0 0 chr20 62853135 62853193 -9300689 + (TG)n Simple_repeat Simple_repeat 2 59 0 1141 272 18 48 chr20 62853193 62853435 -9300447 + MLT1K LTR MaLR 289 519 -69 2459 77 0 0 chr20 62853435 62853735 -9300147 - AluY SINE Alu -11 300 1 1141 272 18 48 chr20 62853735 62853799 -9300083 + MLT1K LTR MaLR 519 583 -5 1903 155 0 26 chr20 62854741 62855050 -9298832 - AluJo SINE Alu -3 309 9 2353 96 3 0 chr20 62855381 62855674 -9298208 - AluSg SINE Alu -16 294 1 230 254 91 36 chr20 62855816 62855926 -9297956 + MIR3 SINE MIR 65 180 -28 367 238 0 12 chr20 62856328 62856412 -9297470 - L1M4 LINE L1 -1179 4967 4885 290 275 129 12 chr20 62856489 62856740 -9297142 - L2 LINE L2 -292 3021 2735 2194 114 13 10 chr20 62857148 62857447 -9296435 + AluSx SINE Alu 1 300 -12 703 256 33 29 chr20 62857545 62857787 -9296095 - L1MC4 LINE L1 -424 7618 7376 382 100 14 14 chr20 62857941 62858011 -9295871 + (CA)n Simple_repeat Simple_repeat 1 70 0 2325 87 7 7 chr20 62858046 62858346 -9295536 + AluSx SINE Alu 1 300 -12 408 300 47 18 chr20 62858532 62858702 -9295180 + MER5B DNA MER1_type 1 175 -3 191 195 0 24 chr20 62858775 62858816 -9295066 - MIR SINE MIR -2 260 221 1077 261 129 63 chr20 62858823 62859068 -9294814 + MLT1K LTR MaLR 1 229 -359 1229 172 75 97 chr20 62859068 62859223 -9294659 + AluJb SINE Alu 1 147 -165 2401 96 0 0 chr20 62859223 62859535 -9294347 + AluSx SINE Alu 1 312 0 1229 172 75 97 chr20 62859535 62859698 -9294184 + AluJb SINE Alu 147 312 0 1077 261 129 63 chr20 62859698 62860004 -9293878 + MLT1K LTR MaLR 229 588 0 195 265 61 0 chr20 62860101 62860150 -9293732 + MER5A DNA MER1_type 138 189 0 2094 132 0 28 chr20 62860205 62860524 -9293358 - AluSx SINE Alu -2 310 1 2333 100 3 3 chr20 62860538 62860849 -9293033 - AluSq SINE Alu -2 311 1 244 321 83 17 chr20 62861373 62861613 -9292269 - L2 LINE L2 -3 3310 3055 2777 77 6 0 chr20 62861637 62861990 -9291892 - THE1A LTR MaLR 0 355 1 180 293 66 38 chr20 62862343 62862449 -9291433 - L2 LINE L2 -568 2746 2638 348 260 0 0 chr20 62862451 62862524 -9291358 + MER81 DNA DNA 5 77 -37 343 310 21 0 chr20 62862546 62862688 -9291194 - L2 LINE L2 -666 2648 2504 2489 64 3 0 chr20 62863385 62863680 -9290202 + AluY SINE Alu 1 296 -15 261 0 0 0 chr20 62863687 62863716 -9290166 + (CA)n Simple_repeat Simple_repeat 2 30 0 263 284 0 0 chr20 62863721 62863809 -9290073 - L1MC4 LINE L1 -1339 6703 6616 315 319 8 17 chr20 62863817 62863936 -9289946 - L1MC4 LINE L1 -1339 6703 6586 388 182 45 4 chr20 62864242 62864510 -9289372 + (TCTA)n Simple_repeat Simple_repeat 1 279 0 868 95 9 0 chr20 62864528 62864644 -9289238 - FLAM_C SINE Alu -15 118 2 696 96 28 28 chr20 62864646 62864823 -9289059 + (TCTA)n Simple_repeat Simple_repeat 2 178 0 291 307 114 0 chr20 62864925 62865039 -9288843 + MER94 DNA DNA 1 127 -7 362 213 11 0 chr20 62865882 62865976 -9287906 + GA-rich Low_complexity Low_complexity 2 96 0 22 0 0 0 chr20 62866067 62866089 -9287793 + AT_rich Low_complexity Low_complexity 1 22 0 390 233 12 0 chr20 62866934 62867020 -9286862 + MER94 DNA DNA 29 115 -19 760 193 9 103 chr20 62867033 62867090 -9286792 + MER3 DNA MER1_type 1 62 -147 2118 117 0 0 chr20 62867090 62867401 -9286481 - AluSx SINE Alu 0 313 3 760 193 9 103 chr20 62867401 62867555 -9286327 + MER3 DNA MER1_type 62 193 -16 1581 55 40 5 chr20 62869253 62869452 -9284430 + AluSg/x SINE Alu 105 310 0 508 238 25 8 chr20 62869697 62869819 -9284063 - MLT1J LTR MaLR -292 219 96 2156 98 27 10 chr20 62869890 62870186 -9283696 + AluSx SINE Alu 1 301 -11 2403 84 0 3 chr20 62871088 62871387 -9282495 - AluSg SINE Alu -5 305 8 260 213 16 16 chr20 62871571 62871632 -9282250 + CT-rich Low_complexity Low_complexity 2 62 0 357 361 28 9 chr20 62871929 62872142 -9281740 + Charlie8 DNA MER1_type 3 219 -2198 1718 99 0 0 chr20 62872729 62872961 -9280921 + AluSg/x SINE Alu 79 310 0 204 179 0 0 chr20 62873026 62873065 -9280817 + CT-rich Low_complexity Low_complexity 3 41 0 2349 117 0 0 chr20 62873178 62873487 -9280395 + AluSx SINE Alu 1 309 -3 580 229 133 45 chr20 62874014 62874367 -9279515 + L1ME4a LINE L1 5727 6110 -11 460 335 27 5 chr20 62874820 62875005 -9278877 + MIR SINE MIR 8 196 -66 1662 176 10 26 chr20 62875128 62875456 -9278426 + AluJo SINE Alu 1 312 0 2226 98 10 3 chr20 62875490 62875785 -9278097 - AluSx SINE Alu -15 297 1 202 217 0 22 chr20 62876447 62876493 -9277389 - L2 LINE L2 -6 3307 3263 474 268 31 10 chr20 62877508 62877702 -9276180 + L2 LINE L2 2458 2655 -659 318 215 152 0 chr20 62877696 62877775 -9276107 - L2 LINE L2 -564 2750 2660 * 222 37 0 0 chr20 62877905 62877932 -9275950 + (CA)n Simple_repeat Simple_repeat 2 28 0 1678 112 0 0 chr20 62877934 62878148 -9275734 - AluSg/x SINE Alu -27 283 70 225 97 0 0 chr20 62878148 62878179 -9275703 - Alu SINE Alu -271 31 1 332 282 19 0 chr20 62878241 62878344 -9275538 + MER103 DNA DNA 14 118 -48 240 297 63 0 chr20 62878377 62878488 -9275394 + L2 LINE L2 2970 3087 -226 1663 156 4 25 chr20 62878787 62878923 -9274959 - AluSx SINE Alu -43 269 141 2196 104 10 13 chr20 62878923 62879096 -9274786 - AluSp SINE Alu -5 308 135 2333 67 40 0 chr20 62879096 62879394 -9274488 - AluY SINE Alu -1 310 1 2196 104 10 13 chr20 62879394 62879529 -9274353 - AluSp SINE Alu -178 135 1 1663 156 4 25 chr20 62879529 62879667 -9274215 - AluSx SINE Alu -171 141 1 413 275 12 17 chr20 62879687 62879874 -9274008 + L2 LINE L2 3137 3308 -5 2259 218 103 30 chr20 62879880 62880489 -9273393 - MLT1E1 LTR MaLR 0 654 1 296 272 0 0 chr20 62880736 62880817 -9273065 - Charlie8 DNA MER1_type -2263 154 74 928 322 103 8 chr20 62881395 62881931 -9271951 + L2 LINE L2 2712 3312 -1 2652 270 76 21 chr20 62882043 62883319 -9270563 - L1MEc LINE L1 -3008 3207 1857 2323 122 0 0 chr20 62883319 62883631 -9270251 - AluSx SINE Alu 0 312 1 2652 270 76 21 chr20 62883631 62883929 -9269953 - L1MEc LINE L1 -4358 1857 1577 258 206 0 0 chr20 62883936 62883999 -9269883 + T-rich Low_complexity Low_complexity 1 63 0 315 314 16 24 chr20 62884466 62884590 -9269292 - MIR SINE MIR -137 125 3 374 264 74 25 chr20 62884596 62884759 -9269123 + MER112 DNA MER1_type 1 171 -89 718 291 14 5 chr20 62885943 62886153 -9267729 - MIR SINE MIR -38 224 13 564 106 0 0 chr20 62886260 62886345 -9267537 + (TTCCC)n Simple_repeat Simple_repeat 4 88 0 466 244 191 85 chr20 62886386 62886710 -9267172 + LTR33A LTR ERVL 5 386 -137 630 46 0 23 chr20 62886710 62886797 -9267085 - L1PA6 LINE L1 0 6154 6070 466 244 191 85 chr20 62886797 62886895 -9266987 + LTR33A LTR ERVL 386 472 -51 1435 115 0 0 chr20 62886952 62887144 -9266738 - AluSq SINE Alu -12 301 110 1704 61 0 0 chr20 62887144 62887341 -9266541 - AluSq SINE Alu -116 197 1 537 309 27 43 chr20 62887358 62887803 -9266079 - LTR16C LTR ERVL -17 474 2 528 284 31 6 chr20 62888125 62888287 -9265595 - MIR SINE MIR -17 245 80 231 297 140 52 chr20 62888528 62888950 -9264932 + L2 LINE L2 2702 3150 -122 265 214 112 34 chr20 62888982 62889071 -9264811 + MIR SINE MIR 49 144 -118 994 207 5 0 chr20 62889217 62889405 -9264477 - MER5A DNA MER1_type 0 189 1 471 244 24 31 chr20 62889528 62889655 -9264227 - L2 LINE L2 0 3313 3188 235 200 12 94 chr20 62890056 62890141 -9263741 + MLT1L LTR MaLR 522 599 -16 396 276 77 6 chr20 62890154 62890310 -9263572 - MIR SINE MIR -3 259 93 207 125 0 0 chr20 62890820 62890860 -9263022 + (A)n Simple_repeat Simple_repeat 1 40 0 300 53 0 0 chr20 62892007 62892045 -9261837 + (TG)n Simple_repeat Simple_repeat 2 39 0 30 27 0 0 chr20 62892137 62892174 -9261708 + AT_rich Low_complexity Low_complexity 1 37 0 192 40 0 0 chr20 62892428 62892453 -9261429 + (CA)n Simple_repeat Simple_repeat 2 26 0 243 61 0 0 chr20 62892662 62892695 -9261187 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 186 233 0 0 chr20 62893529 62893589 -9260293 + (TA)n Simple_repeat Simple_repeat 2 61 0 396 217 100 22 chr20 62893692 62893935 -9259947 + LTR16A1 LTR ERVL 159 457 0 29 0 0 0 chr20 62894562 62894591 -9259291 + AT_rich Low_complexity Low_complexity 1 29 0 2155 113 7 0 chr20 62894927 62895220 -9258662 - AluSx SINE Alu -17 295 1 742 255 35 20 chr20 62895737 62895937 -9257945 + MIR SINE MIR 15 217 -45 1291 73 0 6 chr20 62896013 62896178 -9257704 - L1PA4 LINE L1 0 6155 5992 285 270 216 34 chr20 62896179 62896327 -9257555 + L2 LINE L2 3106 3280 -33 1684 197 3 7 chr20 62896385 62896685 -9257197 - AluJo SINE Alu -13 299 1 879 267 43 25 chr20 62896725 62897051 -9256831 - L1ME1 LINE L1 -12 6154 5823 207 170 21 21 chr20 62897098 62897145 -9256737 + (TA)n Simple_repeat Simple_repeat 1 47 0 502 174 43 16 chr20 62897150 62897460 -9256422 + (TATAG)n Simple_repeat Simple_repeat 1 318 0 386 200 38 70 chr20 62897474 62897659 -9256223 + (TATAG)n Simple_repeat Simple_repeat 2 180 0 675 263 110 19 chr20 62897704 62897913 -9255969 + MIR SINE MIR 35 262 0 210 287 11 69 chr20 62897943 62898030 -9255852 - L2 LINE L2 -5 3267 3186 202 275 92 18 chr20 62898042 62898151 -9255731 + MIR SINE MIR 20 136 -126 190 336 42 8 chr20 62898180 62898299 -9255583 - MIR SINE MIR -79 183 61 308 342 112 0 chr20 62898511 62898672 -9255210 - MIR SINE MIR -37 225 47 572 275 13 39 chr20 62898977 62899210 -9254672 + Charlie8 DNA MER1_type 77 1401 -1016 292 246 46 57 chr20 62899323 62899495 -9254387 - MIR SINE MIR -62 146 14 344 310 57 59 chr20 62900518 62901057 -9252825 + L2 LINE L2 2536 3088 -225 237 257 68 14 chr20 62901265 62901339 -9252543 + L2 LINE L2 3182 3259 -54 517 218 34 0 chr20 62901341 62901549 -9252333 - MER58A DNA MER1_type 0 224 46 193 279 66 0 chr20 62901565 62901626 -9252256 + L2 LINE L2 3247 3311 -2 2368 78 7 0 chr20 62901802 62902098 -9251784 + AluSp SINE Alu 1 298 -15 371 243 197 17 chr20 62902156 62902305 -9251577 + MER5A DNA MER1_type 4 183 -6 240 163 0 0 chr20 62902578 62902621 -9251261 + GA-rich Low_complexity Low_complexity 2 44 0 307 333 44 15 chr20 62902829 62902964 -9250918 - L2 LINE L2 0 3272 3134 680 213 43 141 chr20 62903113 62903559 -9250323 + MER93a LTR ERV1 1 402 0 198 0 0 0 chr20 62903604 62903626 -9250256 + (TTCA)n Simple_repeat Simple_repeat 1 22 0 204 97 0 0 chr20 62903674 62903705 -9250177 + (ATG)n Simple_repeat Simple_repeat 2 32 0 406 251 126 22 chr20 62903718 62903901 -9249981 - MIR SINE MIR -19 243 42 875 284 89 29 chr20 62904539 62904906 -9248976 + MLT1K LTR MaLR 29 475 -113 375 23 0 0 chr20 62904906 62904950 -9248932 + (GA)n Simple_repeat Simple_repeat 1 44 0 875 284 89 29 chr20 62904950 62905051 -9248831 + MLT1K LTR MaLR 475 568 -20 615 246 66 40 chr20 62905423 62905651 -9248231 - Charlie8 DNA MER1_type -2153 264 31 430 271 113 11 chr20 62906141 62906318 -9247564 + MIR SINE MIR 13 207 -55 1314 219 35 60 chr20 62906738 62907104 -9246778 + MLT1A2 LTR MaLR 18 374 0 899 244 43 31 chr20 62907105 62907359 -9246523 - MIR SINE MIR -5 257 1 272 306 56 0 chr20 62907858 62907930 -9245952 + L2 LINE L2 3174 3249 -23 901 247 0 11 chr20 62908640 62908830 -9245052 + MER5A DNA MER1_type 2 189 0 427 303 83 26 chr20 62909286 62909514 -9244368 - MIR SINE MIR -20 242 2 1544 169 7 46 chr20 62909689 62909868 -9244014 - AluJb SINE Alu 0 312 148 2273 114 0 0 chr20 62909868 62910165 -9243717 - AluSx SINE Alu -15 297 1 1544 169 7 46 chr20 62910165 62910287 -9243595 - AluJb SINE Alu -164 148 23 243 0 0 0 chr20 62911081 62911108 -9242774 + (A)n Simple_repeat Simple_repeat 1 27 0 399 226 0 0 chr20 62911277 62911379 -9242503 + CT-rich Low_complexity Low_complexity 3 104 0 366 321 30 18 chr20 62912403 62912568 -9241314 + MIR SINE MIR 48 214 -48 2598 56 0 0 chr20 62913455 62913761 -9240121 - AluY SINE Alu -5 306 1 2175 120 10 0 chr20 62913811 62914112 -9239770 + AluSx SINE Alu 1 304 -8 369 214 143 10 chr20 62914611 62914709 -9239173 + L2 LINE L2 3203 3313 0 256 271 0 9 chr20 62914718 62914835 -9239047 + L1M4 LINE L1 5720 5795 -389 348 183 110 0 chr20 62914835 62914917 -9238965 - MER102a DNA MER1_type 0 330 240 198 0 0 0 chr20 62915887 62915909 -9237973 + (TTTTG)n Simple_repeat Simple_repeat 5 26 0 1306 242 86 34 chr20 62916294 62916561 -9237321 + MER113 DNA MER1_type? 2 306 -215 5148 92 3 7 chr20 62916561 62917248 -9236634 + L1PB2 LINE L1 5468 6151 0 1306 242 86 34 chr20 62917248 62917456 -9236426 + MER113 DNA MER1_type? 306 502 -19 547 274 41 66 chr20 62918552 62918636 -9235246 + MER58C DNA MER1_type 1 86 -2334 654 252 0 0 chr20 62918636 62918767 -9235115 - FLAM_A SINE Alu 0 133 3 547 274 41 66 chr20 62918767 62918879 -9235003 + MER58C DNA MER1_type 86 192 -23 256 286 185 35 chr20 62919672 62919899 -9233983 + MIR SINE MIR 2 262 0 21 0 0 0 chr20 62920028 62920049 -9233833 + AT_rich Low_complexity Low_complexity 1 21 0 553 278 179 5 chr20 62920198 62920410 -9233472 - MLT1L LTR MaLR -45 570 322 259 349 87 8 chr20 62920478 62920604 -9233278 - MLT1L LTR MaLR -384 231 96 254 155 84 70 chr20 62921652 62921723 -9232159 + MLT1L LTR MaLR 147 218 -397 631 300 22 74 chr20 62921789 62922112 -9231770 + MLT1I LTR MaLR 104 409 0 329 232 11 21 chr20 62922296 62922391 -9231491 + MLT1K LTR MaLR 491 584 -4 1162 169 152 0 chr20 62923095 62923332 -9230550 - MER58 DNA MER1_type -67 274 2 523 248 29 0 chr20 62923336 62923473 -9230409 - MIR SINE MIR -15 247 107 2280 104 0 13 chr20 62923558 62923874 -9230008 + AluSq SINE Alu 2 313 0 284 70 23 0 chr20 62924401 62924444 -9229438 + (GGAA)n Simple_repeat Simple_repeat 3 46 0 1799 60 0 219 chr20 62924468 62924838 -9229044 + LTR12 LTR ERV1 1 289 -425 347 207 11 0 chr20 62924838 62924925 -9228957 + LTR30 LTR ERV1 556 643 -79 790 69 0 0 chr20 62924926 62925027 -9228855 + LTR12 LTR ERV1 481 581 -133 21 57 0 0 chr20 62926213 62926248 -9227634 + AT_rich Low_complexity Low_complexity 1 35 0 365 307 80 20 chr20 62927102 62927252 -9226630 - MIR SINE MIR -43 219 61 2519 130 36 0 chr20 62927541 62927903 -9225979 - THE1C LTR MaLR 0 375 1 2483 11 0 0 chr20 62928500 62928764 -9225118 - L1PA3 LINE L1 0 6155 5892 870 39 0 0 chr20 62928764 62928867 -9225015 + L1HS LINE L1 5796 5898 -257 333 248 167 87 chr20 62928867 62929178 -9224704 + MER113 DNA MER1_type? 31 366 -155 351 298 40 33 chr20 62929479 62929630 -9224252 + MIR SINE MIR 79 230 -32 229 200 22 0 chr20 62930411 62930456 -9223426 + MIR SINE MIR 200 245 -17 376 331 83 29 chr20 62930752 62930994 -9222888 - L3 LINE CR1 -771 806 552 186 381 0 10 chr20 62931893 62931990 -9221892 - MER5A DNA MER1_type -59 130 35 383 333 51 13 chr20 62932166 62932322 -9221560 - MIR SINE MIR -71 191 30 237 65 0 0 chr20 62932424 62932455 -9221427 + (TG)n Simple_repeat Simple_repeat 2 32 0 398 288 141 12 chr20 62932594 62932757 -9221125 - MIR SINE MIR 0 262 79 281 297 22 11 chr20 62932807 62932898 -9220984 - MIR3 SINE MIR -43 165 74 24 0 0 0 chr20 62933004 62933028 -9220854 + AT_rich Low_complexity Low_complexity 1 24 0 189 346 192 0 chr20 62933362 62933440 -9220442 + L2 LINE L2 3183 3275 -38 365 286 36 65 chr20 62933907 62934075 -9219807 - MIR SINE MIR -14 248 86 327 206 44 0 chr20 62934109 62934177 -9219705 + MER113 DNA MER1_type? 1 71 -450 910 285 48 24 chr20 62934254 62934591 -9219291 + LTR16B LTR ERVL 117 461 -3 363 203 17 51 chr20 62936424 62936542 -9217340 - Charlie7 DNA MER1_type 0 2612 2499 250 254 18 0 chr20 62936783 62936893 -9216989 + CT-rich Low_complexity Low_complexity 2 113 0 1889 134 28 3 chr20 62937226 62937509 -9216373 + AluJb SINE Alu 1 290 -22 285 315 158 8 chr20 62937555 62937682 -9216200 - MIR3 SINE MIR -27 181 36 236 242 45 15 chr20 62938165 62938231 -9215651 - L2 LINE L2 -4 3268 3201 341 344 32 0 chr20 62938377 62938502 -9215380 - L2 LINE L2 -214 3058 2930 532 301 35 35 chr20 62939054 62939114 -9214768 - MIR SINE MIR -33 229 170 1249 159 4 33 chr20 62939114 62939359 -9214523 - L1MA4 LINE L1 -1 6299 6062 532 301 35 35 chr20 62939359 62939527 -9214355 - MIR SINE MIR -91 171 1 656 221 33 75 chr20 62939594 62939834 -9214048 + MER106A DNA MER1_type 5 234 -2 918 169 10 70 chr20 62940395 62940596 -9213286 + MER53 DNA DNA 1 189 0 1343 249 103 13 chr20 62942404 62942881 -9211001 - MER113 DNA MER1_type? -1 520 1 263 364 101 16 chr20 62944615 62944744 -9209138 - MIR3 SINE MIR -62 146 7 261 0 0 0 chr20 62945500 62945529 -9208353 + (CA)n Simple_repeat Simple_repeat 2 30 0 393 255 170 24 chr20 62945863 62946075 -9207807 - MARNA DNA Mariner -51 535 293 288 77 0 0 chr20 62947073 62947112 -9206770 + (A)n Simple_repeat Simple_repeat 1 39 0 457 324 152 24 chr20 62947225 62947912 -9205970 + L2 LINE L2 2538 3300 -13 346 269 42 77 chr20 62948011 62948271 -9205611 - L1MC4a LINE L1 -1976 5832 5582 2372 171 28 19 chr20 62948882 62949304 -9204578 - MSTB LTR MaLR 0 426 1 26 30 0 0 chr20 62949382 62949415 -9204467 + AT_rich Low_complexity Low_complexity 1 33 0 507 299 41 20 chr20 62949433 62949630 -9204252 - MIR SINE MIR -16 246 46 307 194 30 15 chr20 62949984 62950051 -9203831 - MIR SINE MIR -124 138 71 499 320 68 40 chr20 62950151 62950344 -9203538 + L2 LINE L2 2820 3027 -286 2218 112 3 0 chr20 62950344 62950638 -9203244 - AluSx SINE Alu -14 298 4 499 320 68 40 chr20 62950638 62950769 -9203113 + L2 LINE L2 3027 3153 -160 626 203 82 32 chr20 62950781 62950939 -9202943 + MER20 DNA MER1_type 30 195 -24 250 242 180 8 chr20 62950973 62951101 -9202781 + L2 LINE L2 3163 3312 -1 3816 235 72 38 chr20 62951136 62951777 -9202105 - L1MEc LINE L1 -5080 1316 698 2911 192 54 71 chr20 62951777 62952480 -9201402 + LTR8 LTR ERV1 1 691 0 3816 235 72 38 chr20 62952480 62953070 -9200812 - L1MEc LINE L1 -5698 698 43 401 263 53 35 chr20 62953152 62953323 -9200559 + Charlie7 DNA MER1_type 515 688 -1924 228 340 69 56 chr20 62953478 62953622 -9200260 + L2 LINE L2 3087 3232 -40 415 328 48 11 chr20 62953639 62953828 -9200054 + MIR SINE MIR 59 254 -8 180 0 0 0 chr20 62953838 62953858 -9200024 + (A)n Simple_repeat Simple_repeat 1 20 0 1892 181 28 14 chr20 62954660 62955020 -9198862 + MLT1A1 LTR MaLR 1 365 0 704 282 41 5 chr20 62955415 62955635 -9198247 + MIR SINE MIR 35 262 0 1890 159 38 0 chr20 62955785 62955905 -9197977 + AluJo SINE Alu 1 115 -197 305 45 0 23 chr20 62955905 62955949 -9197933 + (CAAAA)n Simple_repeat Simple_repeat 3 45 0 1890 159 38 0 chr20 62955949 62956118 -9197764 + AluJo SINE Alu 115 301 -11 805 220 23 17 chr20 62956139 62956316 -9197566 + MER5B DNA MER1_type 1 178 0 2403 93 0 0 chr20 62957039 62957339 -9196543 + AluSx SINE Alu 1 300 -12 208 277 137 72 chr20 62957413 62957662 -9196220 - L2 LINE L2 -15 3298 3034 3569 224 75 41 chr20 62958357 62959420 -9194462 + L1MD1 LINE L1 1 1195 -5345 2229 99 3 26 chr20 62959420 62959724 -9194158 - AluSx SINE Alu -15 297 1 3569 224 75 41 chr20 62959724 62959945 -9193937 + L1MD1 LINE L1 1195 1407 -5133 7027 224 22 38 chr20 62960035 62962334 -9191548 + L1MD1 LINE L1 3734 6003 -633 822 179 80 19 chr20 62962335 62962497 -9191385 + AluSg/x SINE Alu 135 306 -4 2486 201 89 12 chr20 62962497 62963079 -9190803 + L1MD1 LINE L1 5998 6624 -12 764 258 68 23 chr20 62963308 62963529 -9190353 - MIR SINE MIR -30 232 2 195 259 74 0 chr20 62963536 62963590 -9190292 + L2 LINE L2 2995 3052 -261 1231 282 66 18 chr20 62964025 62964539 -9189343 + L1MC4a LINE L1 5466 6004 -1804 2180 83 50 0 chr20 62965661 62965939 -9187943 - AluSx SINE Alu -16 296 5 259 291 34 64 chr20 62966517 62966751 -9187131 - L1ME4a LINE L1 -44 6077 5851 1022 201 46 0 chr20 62966936 62967155 -9186727 - L1MA4 LINE L1 -5 6295 6067 2347 116 0 0 chr20 62967997 62968307 -9185575 - AluSx SINE Alu -2 310 1 193 0 94 0 chr20 62968503 62968535 -9185347 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 275 279 186 16 chr20 62968868 62968997 -9184885 + L2 LINE L2 3163 3313 0 245 56 0 0 chr20 62969013 62969049 -9184833 - AluY SINE Alu -2 300 265 1748 45 0 0 chr20 62969049 62969247 -9184635 - AluY SINE Alu -113 198 1 314 287 104 116 chr20 62969413 62969741 -9184141 - Charlie8 DNA MER1_type -2312 105 1 626 253 25 0 chr20 62969877 62970035 -9183847 + MER103 DNA DNA 1 162 -4 2318 185 44 69 chr20 62970106 62970669 -9183213 + MLT2B3 LTR ERVL 6 554 0 306 257 152 9 chr20 62970738 62970843 -9183039 + MIR SINE MIR 5 124 -138 374 237 32 21 chr20 62971203 62971296 -9182586 - L2 LINE L2 -5 3267 3174 640 269 84 8 chr20 62971339 62971577 -9182305 - MER112 DNA MER1_type 0 256 1 1071 160 48 0 chr20 62971860 62972047 -9181835 - Tigger1 DNA MER2_type -4 2414 2219 842 46 9 9 chr20 62972049 62972158 -9181724 - L1PA10 LINE L1 -372 5796 5688 2731 74 18 64 chr20 62972158 62972536 -9181346 + L1PA10 LINE L1 5794 6168 0 825 168 7 7 chr20 62972550 62972687 -9181195 - Tigger1 DNA MER2_type -2261 157 21 299 252 65 47 chr20 62972805 62972897 -9180985 + MLT1L LTR MaLR 489 585 -30 189 0 0 0 chr20 62972897 62972918 -9180964 + (TG)n Simple_repeat Simple_repeat 2 22 0 299 252 65 47 chr20 62972918 62972932 -9180950 + MLT1L LTR MaLR 585 597 -18 523 277 76 25 chr20 62973163 62973401 -9180481 + MIR SINE MIR 13 262 0 239 250 0 18 chr20 62973416 62973472 -9180410 - MIR SINE MIR -120 88 34 359 328 126 6 chr20 62973893 62974067 -9179815 + MIR SINE MIR 18 212 -50 806 243 5 55 chr20 62974628 62974846 -9179036 - MIR SINE MIR -44 218 12 204 204 0 45 chr20 62974862 62974906 -9178976 + MIR SINE MIR 36 77 -131 967 241 138 98 chr20 62974917 62975527 -9178355 - L2 LINE L2 -886 2428 1795 328 363 42 12 chr20 62977467 62977635 -9176247 + L2 LINE L2 3080 3252 -20 229 309 0 0 chr20 62977961 62978029 -9175853 + MIR SINE MIR 183 250 -12 667 233 22 61 chr20 62979244 62979472 -9174410 - MER20 DNA MER1_type 0 219 1 606 12 24 12 chr20 62979666 62979750 -9174132 + (TAGA)n Simple_repeat Simple_repeat 2 86 0 270 200 0 0 chr20 62979752 62979797 -9174085 - Tigger5 DNA MER2_type -2269 54 10 541 231 69 6 chr20 62979893 62980053 -9173829 + MIR SINE MIR 93 262 0 182 276 69 17 chr20 62980072 62980130 -9173752 - MIR SINE MIR -64 144 84 397 290 97 0 chr20 62980570 62980725 -9173157 - MER5B DNA MER1_type 0 178 9 216 244 0 0 chr20 62981086 62981131 -9172751 + MIR SINE MIR 103 147 -115 337 283 40 0 chr20 62981149 62981248 -9172634 - MER81 DNA DNA -8 106 4 234 245 0 0 chr20 62981276 62981325 -9172557 + MER5A DNA MER1_type 36 84 -105 606 262 18 6 chr20 62981460 62981624 -9172258 - MIR SINE MIR -8 254 89 506 294 34 17 chr20 62982412 62982589 -9171293 + MIR SINE MIR 83 262 0 1708 194 31 0 chr20 62982659 62982979 -9170903 - MER58B DNA MER1_type -8 333 4 580 284 120 18 chr20 62983607 62983832 -9170050 + MIR SINE MIR 14 261 -1 248 322 13 40 chr20 62983947 62984096 -9169786 - L2 LINE L2 0 3313 3169 2071 113 0 30 chr20 62984230 62984530 -9169352 + AluSx SINE Alu 1 291 -21 743 218 232 5 chr20 62984570 62984781 -9169101 - MIR SINE MIR -2 260 2 406 261 19 56 chr20 62984813 62984952 -9168930 + L2 LINE L2 3158 3292 -21 1689 211 75 0 chr20 62984952 62985274 -9168608 + MER7A DNA MER2_type 1 344 -2 406 261 19 56 chr20 62985274 62985295 -9168587 + L2 LINE L2 3292 3312 -1 2101 132 64 14 chr20 62985638 62985995 -9167887 + THE1C LTR MaLR 1 375 0 186 43 0 0 chr20 62986238 62986261 -9167621 + (A)n Simple_repeat Simple_repeat 1 23 0 1550 158 59 80 chr20 62986909 62987274 -9166608 - MLT1B LTR MaLR -32 346 1 716 263 63 0 chr20 62987349 62987539 -9166343 + MIR SINE MIR 19 220 -42 258 271 0 0 chr20 62987542 62987601 -9166281 - L1MC1 LINE L1 -63 6270 6212 812 227 159 0 chr20 62987793 62988000 -9165882 + MIR SINE MIR 3 242 -20 180 289 0 0 chr20 62988049 62988094 -9165788 + MIR3 SINE MIR 113 157 -51 249 350 14 42 chr20 62988094 62988237 -9165645 + MER5B DNA MER1_type 11 149 -29 2332 139 19 6 chr20 62988252 62988595 -9165287 - L1PB3 LINE L1 -13 6141 5791 195 42 0 0 chr20 62988595 62988619 -9165263 + (TG)n Simple_repeat Simple_repeat 2 25 0 2332 139 19 6 chr20 62988619 62988635 -9165247 - L1PB3 LINE L1 -363 5791 5777 2957 143 51 82 chr20 62988636 62989230 -9164652 - L1MA9 LINE L1 -123 6189 5617 2538 110 8 11 chr20 62989230 62989586 -9164296 + THE1A LTR MaLR 1 355 0 2957 143 51 82 chr20 62989586 62989660 -9164222 - L1MA9 LINE L1 -695 5617 5542 240 234 18 63 chr20 62989834 62989945 -9163937 + (TATATG)n Simple_repeat Simple_repeat 2 107 0 200 139 0 23 chr20 62989950 62989993 -9163889 + (TA)n Simple_repeat Simple_repeat 2 43 0 3020 88 0 0 chr20 62990589 62990952 -9162930 + THE1B LTR MaLR 1 363 -1 551 225 59 47 chr20 62991063 62991232 -9162650 + MIR SINE MIR 82 252 -10 1988 214 12 19 chr20 62991928 62991985 -9161897 + L1ME1 LINE L1 5740 5796 -370 1690 168 18 106 chr20 62991985 62992383 -9161499 - MLT1A1 LTR MaLR -2 363 1 1988 214 12 19 chr20 62992383 62992755 -9161127 + L1ME1 LINE L1 5796 6166 0 2133 108 0 10 chr20 62992813 62993137 -9160745 + AluSx SINE Alu 1 312 0 385 212 126 19 chr20 62994245 62994395 -9159487 - MER106B DNA MER1_type -74 985 2 1511 202 151 44 chr20 62994488 62994919 -9158963 + MLT1D LTR MaLR 21 497 -8 372 195 195 31 chr20 62994937 62995065 -9158817 + MIR SINE MIR 23 171 -91 940 112 15 22 chr20 62995146 62995280 -9158602 + FLAM_C SINE Alu 1 133 0 208 313 55 31 chr20 62995896 62996024 -9157858 + L2 LINE L2 3137 3267 -5 392 242 47 68 chr20 62996240 62996464 -9157418 - MLT1L LTR MaLR -225 390 111 239 135 0 0 chr20 62996522 62996559 -9157323 - MLT1L LTR MaLR -576 39 3 514 130 141 11 chr20 62996763 62996855 -9157027 + MER51A LTR ERV1 1 104 -530 1960 113 71 13 chr20 62996867 62997178 -9156704 + MER51B LTR ERV1 49 377 0 620 231 88 117 chr20 62997469 62997812 -9156070 + MLT1G LTR MaLR 29 374 -188 571 199 29 79 chr20 62997892 62997990 -9155892 + MLT1G3 LTR MaLR 357 458 -72 2140 127 3 3 chr20 62997990 62998289 -9155593 - AluSx SINE Alu -12 300 2 571 199 29 79 chr20 62998289 62998300 -9155582 + MLT1G3 LTR MaLR 458 468 -62 2330 95 0 3 chr20 62998300 62998604 -9155278 - AluSg SINE Alu -7 303 1 571 199 29 79 chr20 62998604 62998700 -9155182 + MLT1G3 LTR MaLR 468 530 0 207 259 0 0 chr20 62998738 62998796 -9155086 + (CATA)n Simple_repeat Simple_repeat 3 60 0 636 309 61 25 chr20 62998948 62999275 -9154607 - MER93a LTR ERV1 -3 399 61 267 275 28 0 chr20 62999481 62999590 -9154292 - L1MC/D LINE L1 -1985 5823 5712 1813 166 7 7 chr20 62999611 62999919 -9153963 - AluJo SINE Alu 0 312 5 2328 108 0 0 chr20 62999991 63000296 -9153586 - AluSx SINE Alu -7 305 1 724 174 37 58 chr20 63001024 63001214 -9152668 + MER5A DNA MER1_type 1 186 -3 261 276 271 5 chr20 63001242 63001452 -9152430 - Charlie8 DNA MER1_type -2151 266 1 339 25 0 0 chr20 63001514 63001554 -9152328 + (CAT)n Simple_repeat Simple_repeat 2 41 0 782 318 52 85 chr20 63002398 63002445 -9151437 - L1ME LINE L1 -345 5817 5770 1252 130 53 0 chr20 63002445 63002653 -9151229 - L1PA13 LINE L1 -3 6160 5942 782 318 52 85 chr20 63002653 63002917 -9150965 - L1ME LINE L1 -392 5770 5526 2037 108 16 35 chr20 63002917 63003109 -9150773 - AluSq SINE Alu -5 308 123 189 0 0 0 chr20 63003109 63003130 -9150752 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 2037 108 16 35 chr20 63003130 63003251 -9150631 - AluSq SINE Alu -190 123 1 782 318 52 85 chr20 63003251 63003456 -9150426 - L1ME LINE L1 -636 5526 5316 4106 184 37 1 chr20 63003511 63004303 -9149579 - L1MB7 LINE L1 -19 6165 5346 469 285 46 42 chr20 63004555 63004839 -9149043 + L1ME LINE L1 5530 5814 -307 455 344 136 6 chr20 63006400 63006731 -9147151 - L2 LINE L2 -39 3274 2901 226 294 55 37 chr20 63006766 63006875 -9147007 - L2 LINE L2 -505 2809 2699 604 307 11 17 chr20 63007055 63007234 -9146648 + MIR SINE MIR 14 191 -71 190 93 23 23 chr20 63007261 63007304 -9146578 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 2340 141 21 21 chr20 63007377 63007752 -9146130 + THE1C LTR MaLR 1 375 0 642 302 44 20 chr20 63008122 63008370 -9145512 - MIR SINE MIR 0 262 9 5618 81 10 36 chr20 63008605 63009428 -9144454 - L1PA13 LINE L1 -4 6159 5359 2329 65 41 3 chr20 63009428 63009721 -9144161 - AluY SINE Alu -7 304 1 17290 182 64 1 chr20 63009722 63013009 -9140873 - L1PA13 LINE L1 -1161 4985 1494 455 320 70 16 chr20 63013088 63013410 -9140472 - MLT1K LTR MaLR -38 550 145 183 80 0 0 chr20 63014231 63014256 -9139626 + (TG)n Simple_repeat Simple_repeat 2 26 0 527 317 61 0 chr20 63014434 63014654 -9139228 - MIR SINE MIR -12 250 19 312 261 60 67 chr20 63014984 63015118 -9138764 + MIR SINE MIR 21 153 -109 455 260 75 7 chr20 63015125 63015271 -9138611 - MIR SINE MIR -11 251 96 1162 193 38 5 chr20 63015293 63015505 -9138377 + MER20 DNA MER1_type 1 219 0 214 274 0 0 chr20 63017434 63017485 -9136397 - MIR SINE MIR -12 250 200 2268 120 0 0 chr20 63068323 63068622 -9085260 - AluSx SINE Alu -13 299 1 193 0 94 0 chr20 63068818 63068850 -9085032 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 191 283 192 20 chr20 63069183 63069282 -9084600 + L2 LINE L2 3163 3278 -35 384 198 132 11 chr20 63069645 63069736 -9084146 + L2 LINE L2 3212 3313 0 332 173 93 0 chr20 63069862 63069937 -9083945 - Charlie8 DNA MER1_type -989 1428 1347 198 0 0 0 chr20 63070914 63070936 -9082946 + (TTTTG)n Simple_repeat Simple_repeat 5 26 0 625 259 63 8 chr20 63071321 63071576 -9082306 + MER113 DNA MER1_type? 2 270 -251 4502 94 1 8 chr20 63071588 63072258 -9081624 + L1PB2 LINE L1 5468 6133 -18 357 219 36 54 chr20 63072363 63072536 -9081346 - MER93b LTR ERV1 -160 242 61 345 291 40 40 chr20 63072676 63072851 -9081031 - L1MC4a LINE L1 -1922 5886 5712 1664 169 7 7 chr20 63072871 63073179 -9080703 - AluJo SINE Alu 0 312 5 2329 108 0 0 chr20 63073251 63073556 -9080326 - AluSx SINE Alu -7 305 1 648 174 37 58 chr20 63074284 63074474 -9079408 + MER5A DNA MER1_type 1 186 -3 312 27 0 0 chr20 63074774 63074811 -9079071 + (CAT)n Simple_repeat Simple_repeat 2 38 0 529 276 36 78 chr20 63075655 63075702 -9078180 - L1ME LINE L1 -303 5818 5771 1134 135 53 0 chr20 63075702 63075910 -9077972 - L1PA13 LINE L1 -3 6160 5942 529 276 36 78 chr20 63075910 63076170 -9077712 - L1ME LINE L1 -350 5771 5524 1891 104 17 35 chr20 63076174 63076367 -9077515 - AluSq SINE Alu -4 309 121 189 0 0 0 chr20 63076367 63076388 -9077494 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 1891 104 17 35 chr20 63076388 63076482 -9077400 - AluSq SINE Alu -192 121 27 198 0 0 0 chr20 63076812 63076834 -9077048 + (A)n Simple_repeat Simple_repeat 1 22 0 399 226 0 0 chr20 63077001 63077103 -9076779 + CT-rich Low_complexity Low_complexity 3 104 0 400 309 30 18 chr20 63078127 63078292 -9075590 + MIR SINE MIR 48 214 -48 1101 250 105 13 chr20 63079613 63080089 -9073793 - MER113 DNA MER1_type? -1 520 1 274 341 64 10 chr20 63081816 63081952 -9071930 - MIR3 SINE MIR -62 146 7 369 0 0 0 chr20 63082708 63082749 -9071133 + (CA)n Simple_repeat Simple_repeat 2 42 0 307 257 171 24 chr20 63083085 63083295 -9070587 - MARNA DNA Mariner -53 533 293 295 313 179 24 chr20 63084446 63084826 -9069056 + L2 LINE L2 2538 2976 -338 473 274 41 66 chr20 63085965 63086049 -9067833 + MER58C DNA MER1_type 1 86 -2334 606 252 0 0 chr20 63086049 63086180 -9067702 - FLAM_A SINE Alu 0 133 3 473 274 41 66 chr20 63086180 63086292 -9067590 + MER58C DNA MER1_type 86 192 -23 266 286 185 35 chr20 63087085 63087312 -9066570 + MIR SINE MIR 2 262 0 193 361 95 19 chr20 63087413 63087571 -9066311 - MIR SINE MIR -25 237 68 476 278 179 5 chr20 63087611 63087823 -9066059 - MLT1L LTR MaLR -45 570 322 527 300 22 74 chr20 63089201 63089524 -9064358 + MLT1I LTR MaLR 104 409 0 291 232 11 21 chr20 63089708 63089803 -9064079 + MLT1K LTR MaLR 491 584 -4 1049 173 152 0 chr20 63090507 63090744 -9063138 - MER58 DNA MER1_type -67 274 2 533 248 29 0 chr20 63090748 63090885 -9062997 - MIR SINE MIR -15 247 107 2279 104 0 13 chr20 63090970 63091286 -9062596 + AluSq SINE Alu 2 313 0 284 70 23 0 chr20 63091813 63091856 -9062026 + (GGAA)n Simple_repeat Simple_repeat 3 46 0 1645 61 129 269 chr20 63091880 63092438 -9061444 + LTR12 LTR ERV1 1 480 -234 21 57 0 0 chr20 63093625 63093660 -9060222 + AT_rich Low_complexity Low_complexity 1 35 0 2163 86 50 0 chr20 63094951 63095230 -9058652 + AluSx SINE Alu 5 297 -15 1215 284 66 18 chr20 63096352 63096866 -9057016 - L1MC4a LINE L1 -1804 6004 5466 195 259 74 0 chr20 63097301 63097355 -9056527 - L2 LINE L2 -261 3052 2995 764 258 68 23 chr20 63097362 63097583 -9056299 + MIR SINE MIR 2 232 -30 2486 201 89 12 chr20 63097811 63098393 -9055489 - L1MD1 LINE L1 -12 6624 5998 822 179 80 19 chr20 63098393 63098555 -9055327 - AluSg/x SINE Alu -4 306 135 7023 223 21 38 chr20 63098556 63100855 -9053027 - L1MD1 LINE L1 -633 6003 3734 3545 224 75 41 chr20 63100945 63101166 -9052716 - L1MD1 LINE L1 -5133 1407 1195 2229 99 3 26 chr20 63101166 63101470 -9052412 + AluSx SINE Alu 1 297 -15 3545 224 75 41 chr20 63101470 63102533 -9051349 - L1MD1 LINE L1 -5345 1195 1 208 277 137 72 chr20 63103228 63103477 -9050405 + L2 LINE L2 3034 3298 -15 2384 94 0 0 chr20 63103551 63103849 -9050033 - AluSx SINE Alu -14 298 1 805 220 23 17 chr20 63104572 63104749 -9049133 - MER5B DNA MER1_type 0 178 1 1890 159 38 0 chr20 63104770 63104939 -9048943 - AluJo SINE Alu -11 301 115 395 37 0 19 chr20 63104939 63104993 -9048889 + (TTTTG)n Simple_repeat Simple_repeat 3 55 0 1890 159 38 0 chr20 63104993 63105113 -9048769 - AluJo SINE Alu -197 115 1 704 282 41 5 chr20 63105263 63105483 -9048399 - MIR SINE MIR 0 262 35 1892 181 28 14 chr20 63105878 63106238 -9047644 - MLT1A1 LTR MaLR 0 365 1 180 0 0 0 chr20 63107040 63107060 -9046822 + (T)n Simple_repeat Simple_repeat 1 20 0 415 328 48 11 chr20 63107070 63107259 -9046623 - MIR SINE MIR -8 254 59 228 340 69 56 chr20 63107276 63107420 -9046462 - L2 LINE L2 -40 3232 3087 401 263 53 35 chr20 63107575 63107746 -9046136 - Charlie7 DNA MER1_type -1924 688 515 3785 237 72 38 chr20 63107828 63108418 -9045464 + L1MEc LINE L1 43 611 -5785 2911 192 54 71 chr20 63108418 63109121 -9044761 - LTR8 LTR ERV1 0 691 1 3785 237 72 38 chr20 63109121 63109762 -9044120 + L1MEc LINE L1 611 1316 -5080 250 242 180 8 chr20 63109797 63109925 -9043957 - L2 LINE L2 -1 3312 3163 626 203 82 32 chr20 63109959 63110117 -9043765 - MER20 DNA MER1_type -24 195 30 499 320 68 40 chr20 63110129 63110260 -9043622 - L2 LINE L2 -160 3153 3027 2218 112 3 0 chr20 63110260 63110554 -9043328 + AluSx SINE Alu 4 298 -14 499 320 68 40 chr20 63110554 63110747 -9043135 - L2 LINE L2 -286 3027 2820 307 194 30 15 chr20 63110847 63110914 -9042968 + MIR SINE MIR 71 138 -124 507 299 41 20 chr20 63111268 63111465 -9042417 + MIR SINE MIR 46 246 -16 26 30 0 0 chr20 63111483 63111516 -9042366 + AT_rich Low_complexity Low_complexity 1 33 0 2372 171 28 19 chr20 63111594 63112016 -9041866 + MSTB LTR MaLR 1 426 0 294 276 44 76 chr20 63112628 63112853 -9041029 + L1MC/D LINE L1 5582 5799 -2009 2469 135 36 0 chr20 63113095 63113457 -9040425 - THE1C LTR MaLR 0 375 1 2483 11 0 0 chr20 63114054 63114318 -9039564 - L1PA3 LINE L1 0 6155 5892 870 39 0 0 chr20 63114318 63114421 -9039461 + L1PA3 LINE L1 5796 5898 -257 333 248 167 87 chr20 63114421 63114732 -9039150 + MER113 DNA MER1_type? 31 366 -155 340 305 40 33 chr20 63115032 63115183 -9038699 + MIR SINE MIR 79 230 -32 215 222 22 0 chr20 63115964 63116009 -9037873 + MIR SINE MIR 200 245 -17 376 331 83 29 chr20 63116305 63116547 -9037335 - L3 LINE CR1 -771 806 552 186 381 0 10 chr20 63117446 63117543 -9036339 - MER5A DNA MER1_type -59 130 35 383 333 51 13 chr20 63117719 63117875 -9036007 - MIR SINE MIR -71 191 30 237 65 0 0 chr20 63117977 63118008 -9035874 + (TG)n Simple_repeat Simple_repeat 2 32 0 398 288 141 12 chr20 63118147 63118310 -9035572 - MIR SINE MIR 0 262 79 281 297 22 11 chr20 63118360 63118451 -9035431 - MIR3 SINE MIR -43 165 74 24 0 0 0 chr20 63118557 63118581 -9035301 + AT_rich Low_complexity Low_complexity 1 24 0 189 346 192 0 chr20 63118915 63118993 -9034889 + L2 LINE L2 3183 3275 -38 365 286 36 65 chr20 63119460 63119628 -9034254 - MIR SINE MIR -14 248 86 327 206 44 0 chr20 63119662 63119730 -9034152 + MER113 DNA MER1_type? 1 71 -450 906 285 48 24 chr20 63119807 63120144 -9033738 + LTR16B LTR ERVL 117 461 -3 363 203 17 51 chr20 63121978 63122096 -9031786 - Charlie7 DNA MER1_type 0 2612 2499 250 254 18 0 chr20 63122337 63122447 -9031435 + CT-rich Low_complexity Low_complexity 2 113 0 1889 134 28 3 chr20 63122780 63123063 -9030819 + AluJb SINE Alu 1 290 -22 285 315 158 8 chr20 63123109 63123236 -9030646 - MIR3 SINE MIR -27 181 36 236 242 45 15 chr20 63123720 63123786 -9030096 - L2 LINE L2 -4 3268 3201 341 344 32 0 chr20 63123932 63124057 -9029825 - L2 LINE L2 -214 3058 2930 522 306 35 35 chr20 63124609 63124669 -9029213 - MIR SINE MIR -33 229 170 1249 159 4 33 chr20 63124669 63124914 -9028968 - L1MA4 LINE L1 -1 6299 6062 522 306 35 35 chr20 63124914 63125082 -9028800 - MIR SINE MIR -91 171 1 656 221 33 75 chr20 63125149 63125389 -9028493 + MER106A DNA MER1_type 5 234 -2 918 169 10 70 chr20 63125950 63126151 -9027731 + MER53 DNA DNA 1 189 0 571 199 29 79 chr20 63127508 63127604 -9026278 - MLT1G LTR MaLR 0 530 431 2330 95 0 3 chr20 63127604 63127908 -9025974 + AluSg SINE Alu 1 303 -7 571 199 29 79 chr20 63127908 63127919 -9025963 - MLT1G LTR MaLR -99 431 421 2140 127 3 3 chr20 63127919 63128218 -9025664 + AluSx SINE Alu 2 300 -12 571 199 29 79 chr20 63128218 63128316 -9025566 - MLT1G LTR MaLR -109 421 357 620 231 88 117 chr20 63128396 63128739 -9025143 - MLT1G LTR MaLR -188 374 29 1960 113 71 13 chr20 63129030 63129341 -9024541 - MER51B LTR ERV1 0 377 49 514 130 141 11 chr20 63129353 63129445 -9024437 - MER51A LTR ERV1 -530 104 1 239 135 0 0 chr20 63129649 63129686 -9024196 + MLT1L LTR MaLR 3 39 -576 392 242 47 68 chr20 63129744 63129968 -9023914 + MLT1L LTR MaLR 111 390 -225 208 313 55 31 chr20 63130184 63130312 -9023570 - L2 LINE L2 -5 3267 3137 940 112 15 22 chr20 63130928 63131062 -9022820 - FLAM_C SINE Alu 0 133 1 372 195 195 31 chr20 63131143 63131271 -9022611 - MIR SINE MIR -91 171 23 1511 202 151 44 chr20 63131289 63131720 -9022162 - MLT1D LTR MaLR -8 497 21 385 212 126 19 chr20 63131813 63131963 -9021919 + MER106B DNA MER1_type 2 985 -74 2133 108 0 10 chr20 63133071 63133404 -9020478 - AluSx SINE Alu 0 312 1 2008 212 12 19 chr20 63133462 63133834 -9020048 - L1ME1 LINE L1 0 6166 5796 1690 168 18 106 chr20 63133834 63134232 -9019650 + MLT1A1 LTR MaLR 1 363 -2 2008 212 12 19 chr20 63134232 63134289 -9019593 - L1ME1 LINE L1 -370 5796 5740 551 225 59 47 chr20 63134985 63135154 -9018728 - MIR SINE MIR -10 252 82 3020 88 0 0 chr20 63135265 63135628 -9018254 - THE1B LTR MaLR -1 363 1 200 139 0 23 chr20 63136224 63136267 -9017615 + (TA)n Simple_repeat Simple_repeat 2 43 0 224 243 18 63 chr20 63136272 63136383 -9017499 + (CATATA)n Simple_repeat Simple_repeat 2 107 0 2957 143 51 82 chr20 63136557 63136631 -9017251 + L1MA9 LINE L1 5542 5617 -695 2520 112 8 11 chr20 63136631 63136987 -9016895 - THE1A LTR MaLR 0 355 1 2957 143 51 82 chr20 63136987 63137581 -9016301 + L1MA9 LINE L1 5617 6189 -123 2342 139 19 6 chr20 63137582 63137598 -9016284 + L1PB3 LINE L1 5777 5791 -363 195 42 0 0 chr20 63137598 63137622 -9016260 + (CA)n Simple_repeat Simple_repeat 2 25 0 2342 139 19 6 chr20 63137622 63137965 -9015917 + L1PB3 LINE L1 5791 6141 -13 244 350 79 14 chr20 63137980 63138120 -9015762 - MER5B DNA MER1_type -29 149 1 180 289 0 0 chr20 63138123 63138168 -9015714 - MIR3 SINE MIR -51 157 113 823 227 159 0 chr20 63138217 63138424 -9015458 - MIR SINE MIR -20 242 3 258 271 0 0 chr20 63138616 63138675 -9015207 + L1MC1 LINE L1 6212 6270 -63 716 263 63 0 chr20 63138678 63138868 -9015014 - MIR SINE MIR -42 220 19 1604 157 59 75 chr20 63138943 63139306 -9014576 + MLT1B LTR MaLR 1 333 -32 195 42 0 0 chr20 63139954 63139978 -9013904 + (T)n Simple_repeat Simple_repeat 1 24 0 2101 132 64 14 chr20 63140221 63140578 -9013304 - THE1C LTR MaLR 0 375 1 406 261 19 56 chr20 63140921 63140942 -9012940 - L2 LINE L2 -1 3312 3292 1689 211 75 0 chr20 63140942 63141264 -9012618 - MER7A DNA MER2_type -2 344 1 406 261 19 56 chr20 63141264 63141403 -9012479 - L2 LINE L2 -21 3292 3158 743 218 232 5 chr20 63141435 63141646 -9012236 + MIR SINE MIR 2 260 -2 2092 110 0 27 chr20 63141686 63141985 -9011897 - AluSx SINE Alu -21 291 1 248 322 13 40 chr20 63142119 63142268 -9011614 + L2 LINE L2 3169 3313 0 593 280 120 18 chr20 63142383 63142608 -9011274 - MIR SINE MIR -1 261 14 1723 191 31 0 chr20 63143236 63143556 -9010326 + MER58B DNA MER1_type 4 333 -8 506 294 34 17 chr20 63143626 63143803 -9010079 - MIR SINE MIR 0 262 83 608 225 21 7 chr20 63144591 63144733 -9009149 + MIR SINE MIR 89 232 -30 234 245 0 0 chr20 63144890 63144939 -9008943 - MER5A DNA MER1_type -105 84 36 318 293 40 0 chr20 63144967 63145066 -9008816 + MER81 DNA DNA 4 106 -8 225 222 0 0 chr20 63145084 63145129 -9008753 - MIR SINE MIR -115 147 103 397 290 97 0 chr20 63145490 63145645 -9008237 + MER5B DNA MER1_type 9 178 0 182 276 69 17 chr20 63146085 63146143 -9007739 + MIR SINE MIR 84 144 -64 516 239 75 6 chr20 63146162 63146321 -9007561 - MIR SINE MIR 0 262 93 270 200 0 0 chr20 63146417 63146462 -9007420 + Tigger5 DNA MER2_type 10 54 -2269 606 12 24 12 chr20 63146464 63146548 -9007334 + (TCTA)n Simple_repeat Simple_repeat 2 86 0 667 233 22 61 chr20 63146744 63146972 -9006910 + MER20 DNA MER1_type 1 219 0 681 277 11 65 chr20 63147327 63147433 -9006449 - MIR SINE MIR 0 262 152 2573 46 0 0 chr20 63147433 63147736 -9006146 - AluY SINE Alu -8 303 1 681 277 11 65 chr20 63147736 63147815 -9006067 - MIR SINE MIR -110 152 92 1518 212 23 54 chr20 63147815 63148201 -9005681 + MLT1A2 LTR MaLR 1 374 0 681 277 11 65 chr20 63148201 63148274 -9005608 - MIR SINE MIR -170 92 17 2145 123 0 3 chr20 63148457 63148758 -9005124 + AluSx SINE Alu 1 300 -12 397 311 101 0 chr20 63149417 63149565 -9004317 + MER91A DNA MER1_type 1 163 -33 186 298 71 24 chr20 63149720 63149804 -9004078 - L2 LINE L2 -16 3297 3210 333 191 131 0 chr20 63149805 63149889 -9003993 + MER96B DNA MER1_type? 81 175 0 404 248 9 9 chr20 63150581 63150694 -9003188 - MER96B DNA MER1_type? -13 404 292 788 210 6 17 chr20 63150703 63150884 -9002998 - MER96B DNA MER1_type? -236 181 3 467 282 40 25 chr20 63151022 63151224 -9002658 - MIR SINE MIR -48 214 10 186 273 55 0 chr20 63151295 63151350 -9002532 + MIR SINE MIR 154 211 -51 245 56 0 0 chr20 63151750 63151786 -9002096 - AluY SINE Alu -2 300 265 1748 45 0 0 chr20 63151786 63151984 -9001898 - AluY SINE Alu -113 198 1 314 287 104 116 chr20 63152150 63152478 -9001404 - Charlie8 DNA MER1_type -2312 105 1 626 253 25 0 chr20 63152614 63152772 -9001110 + MER103 DNA DNA 1 162 -4 2318 185 44 69 chr20 63152843 63153406 -9000476 + MLT2B3 LTR ERVL 6 554 0 306 257 152 9 chr20 63153475 63153580 -9000302 + MIR SINE MIR 5 124 -138 374 237 32 21 chr20 63153940 63154033 -8999849 - L2 LINE L2 -5 3267 3174 640 269 84 8 chr20 63154076 63154314 -8999568 - MER112 DNA MER1_type 0 256 1 1053 166 48 0 chr20 63154597 63154784 -8999098 - Tigger1 DNA MER2_type -4 2414 2219 821 55 9 9 chr20 63154786 63154895 -8998987 - L1PA10 LINE L1 -372 5796 5688 2731 74 18 64 chr20 63154895 63155273 -8998609 + L1PA10 LINE L1 5794 6168 0 825 168 7 7 chr20 63155287 63155424 -8998458 - Tigger1 DNA MER2_type -2261 157 21 299 252 65 47 chr20 63155542 63155634 -8998248 + MLT1L LTR MaLR 489 585 -30 189 0 0 0 chr20 63155634 63155655 -8998227 + (TG)n Simple_repeat Simple_repeat 2 22 0 299 252 65 47 chr20 63155655 63155669 -8998213 + MLT1L LTR MaLR 585 597 -18 523 277 76 25 chr20 63155900 63156138 -8997744 + MIR SINE MIR 13 262 0 239 250 0 18 chr20 63156153 63156209 -8997673 - MIR SINE MIR -120 88 34 359 328 126 6 chr20 63156630 63156804 -8997078 + MIR SINE MIR 18 212 -50 806 243 5 55 chr20 63157365 63157583 -8996299 - MIR SINE MIR -44 218 12 193 227 0 45 chr20 63157599 63157643 -8996239 + MIR SINE MIR 36 77 -131 957 243 138 98 chr20 63157654 63158264 -8995618 - L2 LINE L2 -886 2428 1795 328 363 42 12 chr20 63160204 63160372 -8993510 + L2 LINE L2 3080 3252 -20 229 309 0 0 chr20 63160698 63160766 -8993116 + MIR SINE MIR 183 250 -12 1162 193 38 5 chr20 63162695 63162907 -8990975 - MER20 DNA MER1_type 0 219 1 437 267 75 7 chr20 63162929 63163075 -8990807 + MIR SINE MIR 96 251 -11 312 261 60 67 chr20 63163082 63163216 -8990666 - MIR SINE MIR -109 153 21 538 313 61 0 chr20 63163546 63163766 -8990116 + MIR SINE MIR 19 250 -12 183 80 0 0 chr20 63163944 63163969 -8989913 + (CA)n Simple_repeat Simple_repeat 2 26 0 455 320 70 16 chr20 63164790 63165112 -8988770 + MLT1K LTR MaLR 145 550 -38 17311 182 64 1 chr20 63165191 63168478 -8985404 + L1PA13 LINE L1 1494 4985 -1161 2329 65 41 3 chr20 63168479 63168772 -8985110 + AluY SINE Alu 1 304 -7 5596 83 10 36 chr20 63168772 63169595 -8984287 + L1PA13 LINE L1 5359 6159 -4 642 302 44 20 chr20 63169830 63170078 -8983804 + MIR SINE MIR 9 262 0 2340 141 21 21 chr20 63170448 63170823 -8983059 - THE1C LTR MaLR 0 375 1 190 93 23 23 chr20 63170896 63170939 -8982943 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 604 307 11 17 chr20 63170966 63171145 -8982737 - MIR SINE MIR -71 191 14 226 294 55 37 chr20 63171325 63171434 -8982448 + L2 LINE L2 2699 2809 -505 438 347 136 6 chr20 63171469 63171800 -8982082 + L2 LINE L2 2901 3274 -39 469 287 46 45 chr20 63173327 63173645 -8980237 - L1MC4a LINE L1 -307 5814 5530 3893 188 37 1 chr20 63173897 63174657 -8979225 + L1MB7 LINE L1 5346 6132 -52 2220 161 42 8 chr20 63174662 63175048 -8978834 + LTR9B LTR ERV1 218 616 -28 803 159 6 28 chr20 63175183 63175365 -8978517 + CT-rich Low_complexity Low_complexity 3 180 0 1687 183 0 17 chr20 63175381 63175671 -8978211 - AluJb SINE Alu -24 288 4 624 265 82 27 chr20 63175671 63175882 -8978000 + L2 LINE L2 3082 3307 -6 288 262 41 90 chr20 63176596 63176718 -8977164 + MIR SINE MIR 12 128 -80 405 280 93 39 chr20 63176740 63176922 -8976960 - MIR SINE MIR -2 260 69 624 323 23 53 chr20 63176986 63177286 -8976596 + MER102b DNA MER1_type 50 340 -1 247 338 90 7 chr20 63177482 63177627 -8976255 + L2 LINE L2 2874 3030 -242 * 723 261 34 17 chr20 63177624 63177840 -8976042 - MIR SINE MIR -41 221 5 363 280 0 0 chr20 63181118 63181211 -8972671 + MIR SINE MIR 170 262 0 208 312 13 13 chr20 63181980 63182057 -8971825 - MIR SINE MIR -21 241 165 214 103 77 0 chr20 63182059 63182098 -8971784 + A-rich Low_complexity Low_complexity 4 45 0 238 325 26 43 chr20 63182099 63182216 -8971666 - MIR SINE MIR -71 137 23 2484 70 7 0 chr20 63182420 63182718 -8971164 + AluSx SINE Alu 1 300 -12 2149 122 0 3 chr20 63183568 63183862 -8970020 + AluSx SINE Alu 1 293 -19 437 210 129 81 chr20 63184223 63184326 -8969556 + MIR SINE MIR 49 146 -116 2282 104 3 0 chr20 63184326 63184623 -8969259 + AluSx SINE Alu 1 298 -14 437 210 129 81 chr20 63184623 63184705 -8969177 + MIR SINE MIR 146 243 -19 522 214 10 0 chr20 63185079 63185177 -8968705 + MIR SINE MIR 46 144 -118 204 268 99 0 chr20 63185530 63185601 -8968281 - MIR SINE MIR -62 200 123 186 284 60 0 chr20 63185663 63185730 -8968152 + MIR SINE MIR 116 186 -76 21 0 0 0 chr20 63185730 63185751 -8968131 + AT_rich Low_complexity Low_complexity 1 21 0 380 316 0 18 chr20 63185789 63185903 -8967979 + L2 LINE L2 3196 3307 -6 643 259 12 25 chr20 63187116 63187278 -8966604 - L2 LINE L2 -21 3292 3133 182 365 81 0 chr20 63187281 63187355 -8966527 - L2 LINE L2 -283 3030 2951 22 0 0 0 chr20 63187430 63187452 -8966430 + AT_rich Low_complexity Low_complexity 1 22 0 834 270 123 66 chr20 63187977 63188433 -8965449 + MLT1K LTR MaLR 107 588 0 391 330 188 0 chr20 63188681 63188899 -8964983 + MIR SINE MIR 4 262 0 900 265 45 19 chr20 63189460 63190000 -8963882 - L1M4 LINE L1 -513 5722 3174 815 232 4 46 chr20 63190003 63190244 -8963638 - L1M4 LINE L1 -3280 2935 2705 284 233 50 108 chr20 63190243 63190483 -8963399 - L1M4 LINE L1 -4186 2210 1985 * 312 311 33 44 chr20 63192385 63192565 -8961317 + MER5B DNA MER1_type 1 178 0 295 333 77 0 chr20 63193356 63193473 -8960409 + MIR SINE MIR 83 208 -54 306 0 0 0 chr20 63193737 63193771 -8960111 + (TG)n Simple_repeat Simple_repeat 1 34 0 2123 104 0 0 chr20 63193771 63194050 -8959832 - AluSx SINE Alu -33 279 1 198 284 57 23 chr20 63194420 63194508 -8959374 - MIR SINE MIR -70 192 102 302 282 0 0 chr20 63195004 63195082 -8958800 + LTR67 LTR ERVL 428 505 -52 23 0 0 0 chr20 63195280 63195303 -8958579 + AT_rich Low_complexity Low_complexity 1 23 0 876 285 24 16 chr20 63195466 63195712 -8958170 + MIR SINE MIR 13 260 -2 260 346 124 35 chr20 63196525 63196727 -8957155 + MIR SINE MIR 13 232 -30 189 122 73 73 chr20 63196694 63196735 -8957147 + L2 LINE L2 3201 3241 -31 * 1448 89 0 0 chr20 63197278 63197458 -8956424 + AluSg SINE Alu 1 180 -130 21 36 0 0 chr20 63197663 63197691 -8956191 + AT_rich Low_complexity Low_complexity 1 28 0 656 229 60 27 chr20 63197741 63197924 -8955958 - MIR SINE MIR -47 215 27 679 282 64 27 chr20 63197957 63198255 -8955627 - L1MC4a LINE L1 -1915 5893 5585 819 289 114 41 chr20 63199759 63200327 -8953555 - L2 LINE L2 -5 3308 2698 832 224 151 20 chr20 63200329 63200633 -8953249 - MER2 DNA MER2_type 0 345 2 626 228 8 0 chr20 63200644 63200796 -8953086 + L1ME1 LINE L1 6023 6183 -1 453 322 51 11 chr20 63200808 63200985 -8952897 - L2 LINE L2 -629 2685 2502 298 325 4 107 chr20 63201087 63201321 -8952561 + L2 LINE L2 2497 2706 -608 247 222 148 25 chr20 63201322 63201403 -8952479 - L2 LINE L2 -5 3308 3218 370 188 101 94 chr20 63201409 63201499 -8952383 + Charlie7 DNA MER1_type 317 410 -2202 2166 119 3 0 chr20 63201499 63201792 -8952090 + AluSx SINE Alu 1 294 -18 370 188 101 94 chr20 63201792 63201839 -8952043 + Charlie7 DNA MER1_type 410 455 -2157 419 254 105 24 chr20 63201844 63202255 -8951627 + Charlie7 DNA MER1_type 2086 2610 -2 198 352 84 34 chr20 63202895 63203074 -8950808 - MIR SINE MIR -12 250 63 1801 224 91 4 chr20 63204459 63204932 -8948950 - LTR40a LTR ERVL 0 519 6 1534 32 0 0 chr20 63206171 63206360 -8947522 - L1PA4 LINE L1 -265 5890 5702 1655 39 5 0 chr20 63206360 63206564 -8947318 + L1PA4 LINE L1 5946 6152 -3 218 385 8 0 chr20 63208224 63208341 -8945541 - MIR SINE MIR -25 237 120 308 249 3 61 chr20 63209053 63209152 -8944730 + AluJ/FRAM SINE Alu 216 293 -9 25 51 0 0 chr20 63209253 63209292 -8944590 + AT_rich Low_complexity Low_complexity 1 39 0 2407 54 0 7 chr20 63209455 63209751 -8944131 - AluY SINE Alu -17 294 1 4362 74 5 0 chr20 63209775 63210342 -8943540 - L1PA10 LINE L1 -11 6157 5588 2011 103 18 0 chr20 63210342 63210707 -8943175 + L1PA10 LINE L1 5194 5563 -605 200 268 54 0 chr20 63210829 63210885 -8942997 + L2 LINE L2 3206 3264 -8 306 332 114 5 chr20 63210927 63211120 -8942762 - MIR SINE MIR 0 262 49 261 0 0 0 chr20 63211923 63211952 -8941930 + (TG)n Simple_repeat Simple_repeat 2 30 0 335 346 88 6 chr20 63212154 63212336 -8941546 + MIR SINE MIR 49 245 -17 927 254 67 8 chr20 63212520 63212788 -8941094 + MLT1F1 LTR MaLR 278 561 -6 1824 136 0 14 chr20 63212872 63213151 -8940731 - AluJb SINE Alu -37 275 1 367 293 164 24 chr20 63213191 63213399 -8940483 + L2 LINE L2 3077 3313 0 198 71 0 0 chr20 63213843 63213871 -8940011 + (T)n Simple_repeat Simple_repeat 1 28 0 514 304 119 43 chr20 63214958 63215031 -8938851 - L2 LINE L2 -3 3310 3244 1596 179 35 61 chr20 63215031 63215406 -8938476 - MLT1A1 LTR MaLR 0 365 1 514 304 119 43 chr20 63215406 63215515 -8938367 - L2 LINE L2 -69 3244 3145 2027 125 31 0 chr20 63215515 63215802 -8938080 + AluSx SINE Alu 1 296 -16 514 304 119 43 chr20 63215802 63216301 -8937581 - L2 LINE L2 -168 3145 2566 217 335 55 55 chr20 63216625 63216789 -8937093 - MER5A DNA MER1_type -9 180 17 * 258 391 43 7 chr20 63216653 63216791 -8937091 + MER5A DNA MER1_type 47 189 0 184 344 189 39 chr20 63216860 63217040 -8936842 + MIR SINE MIR 23 229 -33 186 43 0 0 chr20 63217057 63217080 -8936802 + (CAA)n Simple_repeat Simple_repeat 2 24 0 483 279 49 60 chr20 63217080 63217121 -8936761 - MIR SINE MIR -6 256 216 2307 99 3 0 chr20 63217121 63217425 -8936457 - AluSq SINE Alu -8 305 1 483 279 49 60 chr20 63217425 63217566 -8936316 - MIR SINE MIR -46 216 76 227 241 103 0 chr20 63218032 63218090 -8935792 + MIR SINE MIR 90 153 -55 224 100 25 0 chr20 63218128 63218168 -8935714 + (CA)n Simple_repeat Simple_repeat 2 42 0 254 266 0 0 chr20 63218503 63218567 -8935315 - MLT1K LTR MaLR -14 574 511 404 263 102 16 chr20 63219340 63219528 -8934354 - MIR SINE MIR -47 215 18 827 113 31 117 chr20 63219822 63219970 -8933912 - L1MA4 LINE L1 -4 6296 6172 1869 154 41 0 chr20 63219970 63220262 -8933620 - AluJo SINE Alu -8 304 1 827 113 31 117 chr20 63220262 63220335 -8933547 - L1MA4 LINE L1 -128 6172 6094 320 204 80 0 chr20 63220374 63220462 -8933420 - L1MA4 LINE L1 -180 6120 6026 21 57 0 0 chr20 63220469 63220504 -8933378 + AT_rich Low_complexity Low_complexity 1 35 0 351 301 72 42 chr20 63221192 63221498 -8932384 + MLT1L LTR MaLR 162 476 -139 207 140 18 53 chr20 63221690 63221747 -8932135 + A-rich Low_complexity Low_complexity 1 55 0 478 181 0 12 chr20 63222794 63222877 -8931005 - L2 LINE L2 -3 3310 3229 451 236 26 72 chr20 63223204 63223442 -8930440 - MLT1H LTR MaLR -2 547 319 2583 84 6 3 chr20 63223787 63224144 -8929738 - L1PB1 LINE L1 -3 6148 5791 219 139 0 0 chr20 63224155 63224191 -8929691 + (TA)n Simple_repeat Simple_repeat 1 36 0 422 114 0 0 chr20 63224193 63224263 -8929619 - L1PB1 LINE L1 -361 5790 5721 421 225 151 44 chr20 63225787 63226085 -8927797 + LTR37A LTR ERV1 97 426 0 442 230 68 102 chr20 63226087 63226239 -8927643 + MIR SINE MIR 23 166 -96 3962 104 39 10 chr20 63226239 63226856 -8927026 + MER41B LTR ERV1 1 635 0 442 230 68 102 chr20 63226856 63226938 -8926944 + MIR SINE MIR 166 249 -13 303 28 0 0 chr20 63227407 63227443 -8926439 + (CAG)n Simple_repeat Simple_repeat 1 36 0 264 240 333 0 chr20 63227443 63227539 -8926343 + MER5A DNA MER1_type 51 178 -11 248 295 80 36 chr20 63227677 63227789 -8926093 + L2 LINE L2 3197 3313 0 425 308 68 20 chr20 63227994 63228140 -8925742 + MIR SINE MIR 2 154 -108 208 259 0 0 chr20 63228941 63228995 -8924887 + (TA)n Simple_repeat Simple_repeat 2 55 0 571 251 155 17 chr20 63229682 63229921 -8923961 + MLT1K LTR MaLR 301 572 -16 27 29 0 0 chr20 63230200 63230234 -8923648 + AT_rich Low_complexity Low_complexity 1 34 0 689 222 101 0 chr20 63230234 63230432 -8923450 - L1MB1 LINE L1 -28 6161 5944 921 241 45 7 chr20 63231114 63231405 -8922477 - LTR37A LTR ERV1 -2 424 123 674 293 106 45 chr20 63231552 63231740 -8922142 + L2 LINE L2 2748 2923 -390 2491 101 13 19 chr20 63231740 63232117 -8921765 - THE1C LTR MaLR 0 375 1 674 293 106 45 chr20 63232117 63232448 -8921434 + L2 LINE L2 2923 3300 -13 690 291 90 33 chr20 63232537 63232905 -8920977 - MLT1J2 LTR MaLR -27 423 35 22 35 0 0 chr20 63233014 63233043 -8920839 + AT_rich Low_complexity Low_complexity 1 29 0 2021 203 112 10 chr20 63234148 63234640 -8919242 - MLT1F LTR MaLR 0 542 1 731 286 157 39 chr20 63235536 63236198 -8917684 - L2 LINE L2 -38 3275 2523 286 240 74 0 chr20 63236626 63236742 -8917140 - Charlie5 DNA MER1_type 0 2623 2499 266 146 21 0 chr20 63236742 63236790 -8917092 - MLT2C2 LTR ERVL 0 464 416 1201 169 0 5 chr20 63236792 63236999 -8916883 + MER2 DNA MER2_type 1 206 -139 213 217 0 0 chr20 63237122 63237168 -8916714 + (CATATA)n Simple_repeat Simple_repeat 3 48 0 237 260 0 0 chr20 63237173 63237342 -8916540 + (CAGAGA)n Simple_repeat Simple_repeat 4 172 0 2307 218 15 15 chr20 63237406 63237953 -8915929 - MLT2B3 LTR ERVL -19 515 1 543 183 24 8 chr20 63237955 63238081 -8915801 - Charlie5 DNA MER1_type -111 2501 2374 2506 81 7 0 chr20 63238495 63238805 -8915077 - AluSq SINE Alu 0 313 2 952 225 143 67 chr20 63239432 63239809 -8914073 + LTR36 LTR ERV1 1 437 -174 1772 138 21 35 chr20 63239809 63240098 -8913784 - AluJo SINE Alu -23 289 5 952 225 143 67 chr20 63240098 63240288 -8913594 + LTR36 LTR ERV1 437 611 0 1109 194 59 93 chr20 63241645 63241699 -8912183 - MLT2C1 LTR ERVL 0 397 343 398 20 20 0 chr20 63241699 63241750 -8912132 + (TAGA)n Simple_repeat Simple_repeat 3 54 0 1109 194 59 93 chr20 63241750 63241805 -8912077 - MLT2C1 LTR ERVL -54 343 288 2129 122 36 33 chr20 63241805 63242165 -8911717 - THE1B LTR MaLR -3 361 1 1109 194 59 93 chr20 63242165 63242461 -8911421 - MLT2C1 LTR ERVL -109 288 5 316 298 11 11 chr20 63242586 63242680 -8911202 - MIR SINE MIR -167 95 2 812 313 101 39 chr20 63242694 63243180 -8910702 - MLT1K LTR MaLR -63 525 10 212 154 0 58 chr20 63243490 63243542 -8910340 + (TTCA)n Simple_repeat Simple_repeat 1 49 0 206 349 61 0 chr20 63243624 63243690 -8910192 + L2 LINE L2 3148 3217 -55 635 283 72 42 chr20 63243712 63243949 -8909933 + MIR SINE MIR 19 262 0 287 267 60 9 chr20 63244690 63244858 -8909024 + L1ME LINE L1 5704 5883 -287 205 152 0 0 chr20 63244921 63244954 -8908928 + (CA)n Simple_repeat Simple_repeat 2 34 0 23 0 0 0 chr20 63245039 63245062 -8908820 + AT_rich Low_complexity Low_complexity 1 23 0 2071 89 33 16 chr20 63245073 63245376 -8908506 + AluSx SINE Alu 1 308 -4 2376 88 0 7 chr20 63245831 63246138 -8907744 - AluSq SINE Alu -3 310 6 1916 199 5 23 chr20 63246197 63246593 -8907289 - MLT1B LTR MaLR -1 389 1 361 238 25 74 chr20 63246751 63246873 -8907009 + MIR SINE MIR 47 162 -100 274 246 31 54 chr20 63247110 63247230 -8906652 - L1ME4a LINE L1 -22 6099 5981 1483 214 63 16 chr20 63247230 63247608 -8906274 - MSTD LTR MaLR 0 396 1 1891 149 62 6 chr20 63247672 63248027 -8905855 + THE1C LTR MaLR 1 375 0 1275 257 67 17 chr20 63248070 63248490 -8905392 + MLT1C LTR MaLR 22 462 -5 378 300 83 28 chr20 63248496 63248676 -8905206 - L1ME4a LINE L1 -180 5941 5752 300 188 0 0 chr20 63249619 63249683 -8904199 + GA-rich Low_complexity Low_complexity 3 66 0 228 312 117 39 chr20 63249957 63250111 -8903771 - MIR SINE MIR -74 188 23 978 324 40 33 chr20 63250169 63250620 -8903262 - L2 LINE L2 -402 2912 2459 5193 123 67 3 chr20 63252270 63253139 -8900743 - Tigger3b DNA MER2_type -1 1230 307 347 244 89 0 chr20 63253736 63253826 -8900056 + MER58A DNA MER1_type 1 98 -9 672 202 9 0 chr20 63253904 63254018 -8899864 + MER58A DNA MER1_type 105 219 -5 753 279 83 59 chr20 63254030 63254798 -8899084 + L1MEc LINE L1 872 1658 -4738 746 254 108 74 chr20 63254808 63255455 -8898427 + L1MEc LINE L1 1691 2359 -4037 995 307 42 60 chr20 63255527 63256048 -8897834 - LTR67 LTR ERVL -2 555 44 559 296 34 26 chr20 63257510 63257743 -8896139 - MER113 DNA MER1_type? -65 456 222 4669 148 7 32 chr20 63257746 63257869 -8896013 - HSMAR2 DNA Mariner -502 800 676 929 92 0 0 chr20 63257869 63257999 -8895883 + FLAM_C SINE Alu 1 130 -3 4669 148 7 32 chr20 63257999 63258693 -8895189 - HSMAR2 DNA Mariner -626 676 3 349 250 122 0 chr20 63258696 63258844 -8895038 - MER113 DNA MER1_type? -321 200 35 430 302 119 10 chr20 63259010 63259212 -8894670 + MLT1L LTR MaLR 39 262 -353 531 283 55 48 chr20 63259242 63259514 -8894368 + MLT1L LTR MaLR 330 603 -12 317 299 97 26 chr20 63259578 63259732 -8894150 + L2 LINE L2 2889 3053 -219 208 289 84 0 chr20 63260089 63260172 -8893710 + MIR SINE MIR 117 206 -56 212 237 17 17 chr20 63260672 63260731 -8893151 + GA-rich Low_complexity Low_complexity 3 61 0 377 309 29 23 chr20 63260747 63260922 -8892960 + L1MC4a LINE L1 5736 5911 -1897 1960 203 25 2 chr20 63261089 63261523 -8892359 - L1MB7 LINE L1 -2 6182 5739 398 234 11 0 chr20 63261587 63261681 -8892201 - MER53 DNA DNA -91 98 4 371 206 30 0 chr20 63261681 63261769 -8892113 - L1MB7 LINE L1 -438 5746 5655 989 172 187 46 chr20 63261839 63262101 -8891781 + AluJo SINE Alu 1 299 -3 33 0 0 0 chr20 63262104 63262137 -8891745 + AT_rich Low_complexity Low_complexity 1 33 0 414 331 27 0 chr20 63262538 63262686 -8891196 + L2 LINE L2 2910 3061 -252 792 191 22 16 chr20 63262695 63262878 -8891004 + MER53 DNA DNA 1 184 -5 1270 225 89 41 chr20 63262974 63263414 -8890468 - MLT1C LTR MaLR -1 466 6 1743 151 3 33 chr20 63263817 63264122 -8889760 - AluJo SINE Alu -11 301 6 547 291 40 0 chr20 63264565 63264713 -8889169 + MER45A DNA AcHobo 24 177 -1 403 205 170 64 chr20 63264863 63265034 -8888848 + MIR SINE MIR 54 242 -20 678 303 57 47 chr20 63265111 63265497 -8888385 - L2 LINE L2 -5 3308 2919 229 338 79 22 chr20 63265578 63265717 -8888165 - L2 LINE L2 -5 3267 3121 2346 61 0 0 chr20 63265739 63266063 -8887819 + AluY SINE Alu 1 324 0 2638 14 0 0 chr20 63266360 63266650 -8887232 - AluYa5 SINE Alu -3 308 19 315 252 27 9 chr20 63266930 63267041 -8886841 + (TCTA)n Simple_repeat Simple_repeat 4 116 0 23 0 0 0 chr20 63267171 63267194 -8886688 + AT_rich Low_complexity Low_complexity 1 23 0 347 272 103 21 chr20 63268025 63268268 -8885614 + L1M4 LINE L1 4502 4764 -1382 192 273 9 152 chr20 63269679 63269910 -8883972 - L2 LINE L2 -43 3270 3073 2652 254 55 44 chr20 63270092 63271004 -8882878 - L2 LINE L2 -256 3057 2136 216 255 0 0 chr20 63271261 63271312 -8882570 - L2 LINE L2 0 3313 3263 1915 200 42 38 chr20 63271432 63271717 -8882165 + L1 LINE L1 4125 4414 -1732 414 0 0 0 chr20 63271717 63271763 -8882119 + (TAAAA)n Simple_repeat Simple_repeat 2 47 0 1915 200 42 38 chr20 63271763 63271972 -8881910 + L1 LINE L1 4414 4621 -1525 5225 125 24 26 chr20 63272053 63273633 -8880249 + L1PA16 LINE L1 4581 6157 -9 577 170 59 0 chr20 63273820 63273973 -8879909 - Charlie5 DNA MER1_type -10 2602 2441 183 80 0 0 chr20 63273993 63274018 -8879864 + (CATA)n Simple_repeat Simple_repeat 1 25 0 361 217 14 0 chr20 63274032 63274101 -8879781 - Charlie5 DNA MER1_type -2542 70 1 1452 159 159 36 chr20 63274649 63274951 -8878931 - MER1B DNA MER1_type 0 339 1 1516 163 86 78 chr20 63274988 63275374 -8878508 + MLT1B LTR MaLR 1 389 -1 1490 178 9 60 chr20 63275472 63275787 -8878095 + AluJo SINE Alu 1 299 -13 242 333 0 8 chr20 63276159 63276279 -8877603 - LTR67 LTR ERVL -11 546 428 422 301 165 0 chr20 63277481 63277657 -8876225 + MIR SINE MIR 46 250 -12 483 239 31 0 chr20 63277929 63278059 -8875823 + MER103 DNA DNA 26 159 -7 351 0 0 0 chr20 63278488 63278527 -8875355 + (TTTTTA)n Simple_repeat Simple_repeat 4 42 0 317 248 9 0 chr20 63278581 63278694 -8875188 + CT-rich Low_complexity Low_complexity 2 115 0 229 97 0 0 chr20 63279183 63279214 -8874668 + MER103 DNA DNA 57 87 -79 186 411 0 11 chr20 63279357 63279447 -8874435 + L2 LINE L2 3225 3313 0 249 354 16 24 chr20 63279568 63279695 -8874187 + MIR SINE MIR 12 137 -125 2756 31 0 0 chr20 63279749 63280075 -8873807 + L1PA4 LINE L1 5825 6150 -5 202 302 0 0 chr20 63280201 63280244 -8873638 + L2 LINE L2 3214 3256 -16 998 177 0 11 chr20 63280495 63280676 -8873206 + MER20 DNA MER1_type 1 179 -40 21 0 0 0 chr20 63280710 63280731 -8873151 + AT_rich Low_complexity Low_complexity 1 21 0 545 317 64 21 chr20 63281189 63281432 -8872450 + MIR SINE MIR 8 260 -2 322 282 21 49 chr20 63281440 63281582 -8872300 - MIR SINE MIR -77 185 48 1038 202 100 108 chr20 63281664 63282193 -8871689 - MER34B LTR ERV1 -29 536 12 2149 75 0 4 chr20 63283222 63283487 -8870395 - AluSc SINE Alu -45 264 1 22 0 0 0 chr20 63283529 63283551 -8870331 + AT_rich Low_complexity Low_complexity 1 22 0 1364 273 52 44 chr20 63283700 63283859 -8870023 - L2 LINE L2 0 3313 3157 1787 183 0 3 chr20 63283859 63284154 -8869728 + AluJo SINE Alu 1 294 -18 1364 273 52 44 chr20 63284154 63284796 -8869086 - L2 LINE L2 -156 3157 2497 2264 179 62 2 chr20 63284857 63285277 -8868605 + MLT2B2 LTR ERVL 1 445 -70 1292 229 52 15 chr20 63285404 63285731 -8868151 - MER2 DNA MER2_type 0 345 7 1696 84 11 84 chr20 63286506 63286779 -8867103 + AluY SINE Alu 53 305 -6 918 203 9 40 chr20 63287431 63287653 -8866229 + MER20 DNA MER1_type 4 218 -1 1103 225 89 37 chr20 63287812 63287971 -8865911 - MLT1A2 LTR MaLR -28 346 197 2337 90 0 3 chr20 63287971 63288271 -8865611 - AluSx SINE Alu -13 299 1 1103 225 89 37 chr20 63288271 63288436 -8865446 - MLT1A2 LTR MaLR -177 197 5 1696 146 26 36 chr20 63288667 63288976 -8864906 - AluJo SINE Alu -6 306 1 798 315 88 59 chr20 63289621 63290514 -8863368 - L2 LINE L2 -524 2790 1805 2189 97 3 10 chr20 63290529 63290828 -8863054 + AluSg SINE Alu 1 297 -13 491 313 134 26 chr20 63291100 63291487 -8862395 - L2 LINE L2 -81 3232 2804 334 301 29 8 chr20 63291577 63291713 -8862169 + L1ME4a LINE L1 5541 5675 -458 1176 41 27 0 chr20 63291834 63291980 -8861902 + L1PA10 LINE L1 6019 6168 0 309 224 157 30 chr20 63292087 63292355 -8861527 + L1ME4a LINE L1 5802 6103 -18 682 354 26 23 chr20 63293854 63294383 -8859499 + Charlie7 DNA MER1_type 8 538 -2074 402 139 79 40 chr20 63294441 63294542 -8859340 + Charlie7 DNA MER1_type 1734 1838 -774 949 90 0 3 chr20 63294582 63294602 -8859280 + L1P4 LINE L1 5514 5533 -621 1276 74 44 74 chr20 63294602 63294715 -8859167 - L1PA13 LINE L1 -1 6162 6058 2523 47 0 7 chr20 63294715 63295016 -8858866 - AluY SINE Alu -12 299 1 1276 74 44 74 chr20 63295016 63295131 -8858751 - L1PA13 LINE L1 -105 6058 5941 949 90 0 3 chr20 63295131 63295253 -8858629 + L1P4 LINE L1 5533 5653 -501 1090 261 104 16 chr20 63295254 63295859 -8858023 + Charlie7 DNA MER1_type 1930 2587 -25 22 35 0 0 chr20 63297034 63297063 -8856819 + AT_rich Low_complexity Low_complexity 1 29 0 306 0 0 0 chr20 63297486 63297520 -8856362 + (CA)n Simple_repeat Simple_repeat 2 35 0 245 200 0 17 chr20 63297541 63297601 -8856281 + L1MC4 LINE L1 6640 6698 -1344 365 225 30 12 chr20 63297618 63297787 -8856095 + (TA)n Simple_repeat Simple_repeat 2 173 0 216 0 0 0 chr20 63297797 63297821 -8856061 + (CA)n Simple_repeat Simple_repeat 1 24 0 787 315 16 86 chr20 63297860 63298137 -8855745 + L2 LINE L2 2710 3005 -308 814 216 0 0 chr20 63298137 63298290 -8855592 - MER5A DNA MER1_type -36 153 1 787 315 16 86 chr20 63298290 63298500 -8855382 + L2 LINE L2 3005 3303 -10 187 379 81 8 chr20 63298499 63298623 -8855259 - L2 LINE L2 0 3272 3140 * 21 0 0 0 chr20 63299282 63299303 -8854579 + AT_rich Low_complexity Low_complexity 1 21 0 3598 129 8 13 chr20 63299450 63300066 -8853816 + MER4B LTR ERV1 1 779 0 353 247 11 0 chr20 63302685 63302774 -8851108 + MLT1I LTR MaLR 320 409 0 247 283 132 47 chr20 63303784 63303890 -8849992 + L2 LINE L2 3158 3272 0 633 261 25 0 chr20 63305031 63305192 -8848690 - MLT1H LTR MaLR -251 298 134 3675 146 4 26 chr20 63305196 63305681 -8848201 - L1M1 LINE L1 -502 6503 6009 2296 91 3 23 chr20 63305681 63305990 -8847892 - AluSp SINE Alu -10 303 1 3675 146 4 26 chr20 63305990 63306649 -8847233 - L1M1 LINE L1 -996 6009 5372 6815 212 51 21 chr20 63306658 63309851 -8844031 - L1M1 LINE L1 -2427 4421 1131 700 204 32 102 chr20 63309873 63310026 -8843856 - L1MEc LINE L1 -4083 2313 2151 7688 23 0 5 chr20 63310026 63311705 -8842177 - L1PA3 LINE L1 0 6155 4481 700 204 32 102 chr20 63311705 63311993 -8841889 - L1MEc LINE L1 -4245 2151 1903 535 113 0 0 chr20 63312028 63312108 -8841774 - MADE1 DNA Mariner 0 80 1 219 217 40 0 chr20 63312109 63312261 -8841621 + (TA)n Simple_repeat Simple_repeat 2 159 0 587 266 69 72 chr20 63312263 63312455 -8841427 - L1MEc LINE L1 -4481 1915 1724 2217 124 0 0 chr20 63312455 63312754 -8841128 - AluSx SINE Alu -13 299 1 587 266 69 72 chr20 63312754 63313128 -8840754 - L1MEc LINE L1 -4672 1724 1351 2294 100 0 3 chr20 63313144 63313444 -8840438 - AluSx SINE Alu -13 299 1 855 345 53 26 chr20 63313446 63314255 -8839627 - L1MEc LINE L1 -5520 876 46 24 0 0 0 chr20 63314317 63314341 -8839541 + AT_rich Low_complexity Low_complexity 1 24 0 2235 118 10 0 chr20 63314346 63314652 -8839230 - AluSg SINE Alu -1 309 1 192 217 0 0 chr20 63315620 63315666 -8838216 + (CA)n Simple_repeat Simple_repeat 1 46 0 531 269 38 12 chr20 63316455 63316615 -8837267 + L2 LINE L2 2650 2813 -501 327 222 0 25 chr20 63316616 63316697 -8837185 + MER58B DNA MER1_type 4 82 -259 793 142 0 45 chr20 63316703 63316837 -8837045 + FLAM_C SINE Alu 3 130 -3 1064 198 41 4 chr20 63316880 63317122 -8836760 + MER58B DNA MER1_type 83 333 -8 677 279 36 97 chr20 63317136 63317663 -8836219 + L2 LINE L2 2816 3310 -3 234 0 0 0 chr20 63317748 63317774 -8836108 + (T)n Simple_repeat Simple_repeat 1 26 0 604 262 30 26 chr20 63318139 63318372 -8835510 - LTR16C LTR ERVL -31 460 227 366 347 116 5 chr20 63318569 63318759 -8835123 - MIR SINE MIR -43 219 9 221 337 42 54 chr20 63318935 63319101 -8834781 + L2 LINE L2 2927 3090 -223 456 332 73 36 chr20 63319182 63319550 -8834332 + L2 LINE L2 2682 3057 -215 2200 108 0 3 chr20 63319655 63319962 -8833920 - AluSc SINE Alu -3 306 1 246 190 35 0 chr20 63320707 63320765 -8833117 - MLT1J2 LTR MaLR -32 418 359 314 243 171 9 chr20 63320928 63321039 -8832843 - L2 LINE L2 -596 2718 2590 371 307 114 12 chr20 63321824 63321990 -8831892 + MIR3 SINE MIR 21 203 -5 1478 282 65 27 chr20 63322333 63323046 -8830836 - MER20B DNA MER1_type -1 782 43 484 237 46 35 chr20 63323273 63323446 -8830436 - MER104 DNA MER2_type -1 179 5 314 241 117 36 chr20 63323552 63323689 -8830193 + MIR SINE MIR 115 262 0 2419 98 0 9 chr20 63324134 63324449 -8829433 + AluSp SINE Alu 1 312 -1 186 71 0 0 chr20 63324452 63324480 -8829402 + (CAAAAA)n Simple_repeat Simple_repeat 2 29 0 441 0 0 0 chr20 63324595 63324644 -8829238 + (CA)n Simple_repeat Simple_repeat 1 49 0 333 304 150 10 chr20 63324692 63324899 -8828983 - MIR SINE MIR -12 250 15 2419 263 96 22 chr20 63326711 63328290 -8825592 - L1ME2 LINE L1 -26 6207 4373 870 139 58 17 chr20 63328290 63328462 -8825420 - L1PA15 LINE L1 0 6165 5987 2419 263 96 22 chr20 63328462 63329231 -8824651 - L1ME2 LINE L1 -1860 4373 3662 438 210 129 81 chr20 63329598 63329701 -8824181 + MIR SINE MIR 49 146 -116 2284 104 3 0 chr20 63329701 63329998 -8823884 + AluSx SINE Alu 1 298 -14 438 210 129 81 chr20 63329998 63330080 -8823802 + MIR SINE MIR 146 243 -19 523 214 10 0 chr20 63330454 63330552 -8823330 + MIR SINE MIR 46 144 -118 232 255 208 9 chr20 63330870 63330976 -8822906 - MIR SINE MIR -13 249 123 31 26 0 0 chr20 63331088 63331126 -8822756 + AT_rich Low_complexity Low_complexity 1 38 0 366 325 0 18 chr20 63331164 63331278 -8822604 + L2 LINE L2 3196 3307 -6 648 259 12 25 chr20 63332491 63332653 -8821229 - L2 LINE L2 -21 3292 3133 183 365 81 0 chr20 63332656 63332730 -8821152 - L2 LINE L2 -283 3030 2951 22 0 0 0 chr20 63332805 63332827 -8821055 + AT_rich Low_complexity Low_complexity 1 22 0 680 270 123 66 chr20 63333352 63333808 -8820074 + MLT1K LTR MaLR 107 588 0 399 326 188 0 chr20 63334056 63334274 -8819608 + MIR SINE MIR 4 262 0 808 248 19 0 chr20 63334835 63335041 -8818841 - L1ME LINE L1 -513 5653 5444 403 272 66 33 chr20 63335040 63335375 -8818507 - L1ME2 LINE L1 -2696 3519 3174 * 710 232 4 46 chr20 63335378 63335619 -8818263 - L1ME2 LINE L1 -3280 2935 2705 254 261 56 39 chr20 63335678 63335858 -8818024 - L1ME2 LINE L1 -4229 2167 1985 370 311 33 44 chr20 63337760 63337940 -8815942 + MER5B DNA MER1_type 1 178 0 305 333 77 0 chr20 63338731 63338848 -8815034 + MIR SINE MIR 83 208 -54 288 0 0 0 chr20 63339112 63339144 -8814738 + (TG)n Simple_repeat Simple_repeat 1 32 0 2117 104 0 0 chr20 63339144 63339423 -8814459 - AluSx SINE Alu -33 279 1 206 284 57 23 chr20 63339793 63339881 -8814001 - MIR SINE MIR -70 192 102 272 282 0 0 chr20 63340377 63340455 -8813427 + LTR67 LTR ERVL 428 505 -52 23 0 0 0 chr20 63340653 63340676 -8813206 + AT_rich Low_complexity Low_complexity 1 23 0 894 285 24 16 chr20 63340839 63341085 -8812797 + MIR SINE MIR 13 260 -2 248 351 124 35 chr20 63341898 63342100 -8811782 + MIR SINE MIR 13 232 -30 187 122 73 73 chr20 63342067 63342108 -8811774 + L2 LINE L2 3201 3241 -31 * 2231 109 0 0 chr20 63342651 63342944 -8810938 + AluSg SINE Alu 1 293 -17 1739 153 7 39 chr20 63342988 63343296 -8810586 - AluJo SINE Alu -14 298 1 1164 65 0 0 chr20 63343675 63343813 -8810069 + AluY SINE Alu 1 138 -173 611 270 77 40 chr20 63344583 63344917 -8808965 - MLT1G1 LTR MaLR -181 414 10 255 137 49 10 chr20 63346137 63346239 -8807643 + (TA)n Simple_repeat Simple_repeat 1 106 0 408 161 42 0 chr20 63346317 63346460 -8807422 + (TA)n Simple_repeat Simple_repeat 2 150 0 453 281 0 52 chr20 63346539 63346638 -8807244 + L2 LINE L2 3145 3237 -35 757 273 11 0 chr20 63346638 63346814 -8807068 + MER45A DNA AcHobo 1 178 0 453 281 0 52 chr20 63346814 63346849 -8807033 + L2 LINE L2 3237 3272 0 689 294 101 40 chr20 63347742 63348286 -8805596 - MLT1K LTR MaLR -1 587 11 440 293 67 12 chr20 63349623 63349787 -8804095 + MIR SINE MIR 2 174 -88 216 0 0 0 chr20 63350108 63350132 -8803750 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 228 231 86 68 chr20 63350257 63350374 -8803508 + LTR11 LTR ERV 345 463 -221 264 304 149 31 chr20 63350374 63350449 -8803433 - L2 LINE L2 0 3270 3056 1149 209 47 103 chr20 63350474 63350711 -8803171 - MLT1A1 LTR MaLR 0 365 157 2187 139 32 29 chr20 63350711 63351085 -8802797 + THE1C LTR MaLR 1 375 0 1149 209 47 103 chr20 63351085 63351234 -8802648 - MLT1A1 LTR MaLR -208 157 1 492 286 32 41 chr20 63351234 63351454 -8802428 - L2 LINE L2 -228 3044 2827 479 195 13 104 chr20 63352079 63352233 -8801649 + L2 LINE L2 3123 3262 -51 211 258 45 30 chr20 63352377 63352443 -8801439 + L2 LINE L2 3199 3265 -48 229 288 91 0 chr20 63352761 63352827 -8801055 - Charlie8 DNA MER1_type -2342 75 4 3568 106 18 35 chr20 63353672 63353766 -8800116 - L1MA3 LINE L1 0 6305 6211 2265 101 7 0 chr20 63353766 63354064 -8799818 + AluSp SINE Alu 1 300 -13 3568 106 18 35 chr20 63354064 63354515 -8799367 - L1MA3 LINE L1 -94 6211 5769 5286 53 6 5 chr20 63354515 63355143 -8798739 - L1PA8 LINE L1 0 6172 5537 3523 116 7 26 chr20 63355143 63355748 -8798134 - L1MA3 LINE L1 -532 5773 5201 467 221 230 33 chr20 63356643 63356856 -8797026 - MIR SINE MIR 0 262 8 523 273 118 29 chr20 63356946 63357184 -8796698 + MIR SINE MIR 4 262 0 2338 117 42 31 chr20 63357189 63357547 -8796335 - THE1B LTR MaLR 0 364 3 196 220 0 60 chr20 63358167 63358217 -8795665 - L2 LINE L2 -12 3301 3255 213 306 0 16 chr20 63358389 63358451 -8795431 - MIR3 SINE MIR -53 155 95 342 200 31 0 chr20 63358455 63358520 -8795362 + Charlie1 DNA MER1_type 3 69 -2692 1840 149 53 33 chr20 63358521 63358916 -8794966 + Charlie1 DNA MER1_type 2344 2746 -15 2874 153 14 0 chr20 63359001 63359445 -8794437 + L1PA16 LINE L1 5701 6150 -16 314 282 110 71 chr20 63359890 63360199 -8793683 - L1M2 LINE L1 -5930 919 599 331 198 124 16 chr20 63360399 63360524 -8793358 - MIR SINE MIR -69 139 16 426 278 131 31 chr20 63360572 63360763 -8793119 - MIR SINE MIR -6 256 47 339 233 371 0 chr20 63360988 63361104 -8792778 - MIR SINE MIR -93 169 11 245 294 95 32 chr20 63361471 63361597 -8792285 - MIR SINE MIR -99 163 30 269 275 129 81 chr20 63361623 63361994 -8791888 - L2 LINE L2 -1 3312 2924 395 219 70 70 chr20 63362488 63362675 -8791207 + L2 LINE L2 3022 3208 -105 1291 116 6 0 chr20 63362772 63362953 -8790929 + AluSc SINE Alu 122 303 -6 396 172 46 46 chr20 63363360 63363447 -8790435 - MIR SINE MIR -88 174 88 315 247 26 0 chr20 63363580 63363657 -8790225 - Charlie4 DNA MER1_type 0 1961 1883 226 217 58 14 chr20 63363608 63363677 -8790205 + Tigger1 DNA MER2_type 1505 1576 -842 * 2373 97 0 0 chr20 63363757 63364057 -8789825 + AluSx SINE Alu 1 300 -12 206 234 0 0 chr20 63365249 63365296 -8788586 + (CA)n Simple_repeat Simple_repeat 2 48 0 699 249 94 5 chr20 63365329 63365542 -8788340 + MIR SINE MIR 31 262 0 22 0 0 0 chr20 63365609 63365631 -8788251 + AT_rich Low_complexity Low_complexity 1 22 0 328 307 159 0 chr20 63367375 63367538 -8786344 - MIR SINE MIR -4 258 70 311 265 29 39 chr20 63367574 63367676 -8786206 - L1ME4a LINE L1 -43 6078 5978 431 283 58 50 chr20 63367822 63368080 -8785802 - L1ME4a LINE L1 -288 5833 5574 2286 83 0 20 chr20 63368480 63368807 -8785075 - AluSg SINE Alu 0 310 1 467 308 42 81 chr20 63368850 63369185 -8784697 - L2 LINE L2 -26 3246 2925 818 203 198 0 chr20 63369311 63369498 -8784384 - MER58A DNA MER1_type 0 224 1 875 179 15 46 chr20 63369679 63369874 -8784008 - MER5A DNA MER1_type 0 189 1 276 298 44 0 chr20 63370044 63370158 -8783724 - LTR37B LTR ERV1 -53 415 297 565 181 0 0 chr20 63370185 63370312 -8783570 - L1MA7 LINE L1 0 6291 6165 23 0 0 0 chr20 63370838 63370861 -8783021 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr20 63371148 63371171 -8782711 + AT_rich Low_complexity Low_complexity 1 23 0 223 177 48 0 chr20 63371446 63371508 -8782374 + (TA)n Simple_repeat Simple_repeat 1 65 0 2011 130 17 3 chr20 63372072 63372371 -8781511 - AluSc SINE Alu -6 303 1 468 190 240 28 chr20 63372690 63372869 -8781013 - LTR33 LTR ERVL -273 248 32 328 242 112 92 chr20 63373198 63373458 -8780424 - Charlie8 DNA MER1_type -2146 271 7 560 239 234 10 chr20 63374024 63374233 -8779649 + MER102a DNA MER1_type 75 330 0 347 264 194 7 chr20 63374469 63374613 -8779269 - MER5A DNA MER1_type -8 181 11 276 247 123 12 chr20 63374660 63374822 -8779060 - L2 LINE L2 -1203 2111 1932 279 188 130 29 chr20 63375488 63375557 -8778325 + MER5A DNA MER1_type 1 76 -113 280 169 123 0 chr20 63375643 63375708 -8778174 + MER5A DNA MER1_type 103 175 -14 2074 123 0 10 chr20 63376590 63376898 -8776984 - AluSx SINE Alu -7 305 1 349 273 91 51 chr20 63377085 63377261 -8776621 - MIR SINE MIR -10 252 70 423 283 146 19 chr20 63377814 63378019 -8775863 - MIR SINE MIR -30 232 2 1547 167 8 4 chr20 63378301 63378553 -8775329 + AluJb SINE Alu 42 294 -18 383 339 78 78 chr20 63378973 63379360 -8774522 + L2 LINE L2 2551 2937 -377 1210 220 17 61 chr20 63379574 63379600 -8774282 + L1ME3 LINE L1 5611 5637 -525 2127 152 131 8 chr20 63379600 63379981 -8773901 + MSTA LTR MaLR 1 428 0 1210 220 17 61 chr20 63379981 63380053 -8773829 + L1ME3 LINE L1 5637 5711 -451 1204 155 193 38 chr20 63380053 63380343 -8773539 - MER44D DNA MER2_type 0 609 5 1210 220 17 61 chr20 63380343 63380589 -8773293 + L1ME3 LINE L1 5711 5941 -221 424 282 48 29 chr20 63380625 63380844 -8773038 - MIR SINE MIR 0 262 39 848 226 148 16 chr20 63381128 63381371 -8772511 + ORSL DNA AcHobo 1 275 0 2180 118 0 3 chr20 63382387 63382683 -8771199 - AluSc SINE Alu -14 295 1 623 221 13 20 chr20 63383030 63383179 -8770703 - Charlie8 DNA MER1_type -2213 204 57 189 0 0 0 chr20 63383472 63383493 -8770389 + (T)n Simple_repeat Simple_repeat 1 21 0 236 263 163 0 chr20 63384117 63384197 -8769685 - MIR3 SINE MIR -3 205 113 1523 250 93 46 chr20 63384255 63384815 -8769067 + MLT1E LTR MaLR 3 588 -5 285 51 0 0 chr20 63385017 63385056 -8768826 + (TA)n Simple_repeat Simple_repeat 2 40 0 7446 40 1 0 chr20 63385056 63386259 -8767623 - L1PA5 LINE L1 -21 6133 4930 594 293 62 22 chr20 63386398 63386623 -8767259 - MIR SINE MIR -21 241 8 219 333 13 0 chr20 63386649 63386724 -8767158 + MIR SINE MIR 187 262 0 600 252 116 81 chr20 63386957 63387390 -8766492 - MLT1K LTR MaLR -50 538 91 1886 218 97 29 chr20 63387956 63388503 -8765379 - MLT1F1 LTR MaLR 0 567 1 2247 106 3 0 chr20 63388815 63389107 -8764775 + AluSp SINE Alu 1 293 -20 2354 65 41 0 chr20 63391538 63391828 -8762054 + AluSp SINE Alu 1 302 -11 27240 56 11 5 chr20 63391889 63396244 -8757638 + L1PA4 LINE L1 2021 6155 0 524 318 123 39 chr20 63396279 63396507 -8757375 + L2 LINE L2 2120 2394 -920 3572 100 81 6 chr20 63396507 63397028 -8756854 - L1PB2 LINE L1 -7 6144 5585 524 318 123 39 chr20 63397028 63397180 -8756702 + L2 LINE L2 2394 2532 -782 506 237 41 36 chr20 63397240 63397434 -8756448 - L1MC5 LINE L1 -60 7901 7707 380 181 141 27 chr20 63397445 63397594 -8756288 - L1MC5 LINE L1 -293 7668 7503 373 228 44 61 chr20 63397684 63397798 -8756084 + LTR16A LTR ERVL 1 112 -338 2312 103 3 3 chr20 63397822 63398133 -8755749 - AluSx SINE Alu -1 311 1 497 288 7 14 chr20 63398133 63398295 -8755587 - L1MC5 LINE L1 -1130 6831 6694 2264 170 56 15 chr20 63398363 63398774 -8755108 - MLT2B1 LTR ERVL -92 428 1 462 247 34 0 chr20 63398774 63398863 -8755019 + MER5A DNA MER1_type 15 106 -83 572 297 85 5 chr20 63399029 63399241 -8754641 - MIR SINE MIR -31 231 3 1420 280 83 28 chr20 63399380 63399671 -8754211 + L2 LINE L2 2474 2748 -565 1005 258 5 5 chr20 63399671 63399888 -8753994 + MER58A DNA MER1_type 5 221 -3 1420 280 83 28 chr20 63399888 63400378 -8753504 + L2 LINE L2 2748 3308 -5 315 262 0 48 chr20 63400361 63400445 -8753437 - L2 LINE L2 -1 3271 3192 * 4681 71 9 7 chr20 63400516 63401096 -8752786 + L1PA10 LINE L1 5578 6158 -10 350 301 38 16 chr20 63401327 63401513 -8752369 + L1MC5 LINE L1 7613 7802 -159 258 106 0 0 chr20 63401556 63401603 -8752279 + (T)n Simple_repeat Simple_repeat 1 47 0 6533 68 15 42 chr20 63401604 63402650 -8751232 - SVA Other Other -629 1385 433 291 275 0 77 chr20 63402669 63402760 -8751122 - MIR SINE MIR -161 101 18 253 357 93 0 chr20 63403353 63403482 -8750400 - MIR SINE MIR 0 262 122 620 328 41 12 chr20 63403630 63403874 -8750008 - MIR SINE MIR -10 252 2 2338 30 0 0 chr20 63403978 63404241 -8749641 - AluY SINE Alu -8 303 41 815 224 31 0 chr20 63404352 63404544 -8749338 + MER20 DNA MER1_type 22 219 0 220 306 16 0 chr20 63404649 63404711 -8749171 + L2 LINE L2 2992 3054 -218 183 80 0 0 chr20 63404891 63404916 -8748966 + (A)n Simple_repeat Simple_repeat 1 25 0 537 166 27 2 chr20 63405076 63405197 -8748685 - L1ME1 LINE L1 0 6184 6066 2086 124 0 0 chr20 63405240 63405554 -8748328 - AluSx SINE Alu 0 314 1 183 42 0 0 chr20 63405556 63405580 -8748302 + (TTTTTA)n Simple_repeat Simple_repeat 2 25 0 3040 221 66 34 chr20 63405620 63406327 -8747555 - L1ME1 LINE L1 -5 6230 5471 1816 182 0 13 chr20 63406327 63406629 -8747253 + AluJb SINE Alu 1 298 -14 3040 221 66 34 chr20 63406629 63407155 -8746727 - L1ME1 LINE L1 -764 5471 4963 370 198 49 12 chr20 63407193 63407274 -8746608 + LTR45 LTR ERV1 52 135 -390 638 209 57 6 chr20 63407335 63407493 -8746389 + LTR45B LTR ERV1 324 489 0 344 231 26 0 chr20 63407504 63407582 -8746300 - L1ME1 LINE L1 -1260 4955 4876 598 304 16 5 chr20 63407602 63407793 -8746089 - MIR SINE MIR -14 248 56 262 375 46 20 chr20 63407826 63407978 -8745904 + L2 LINE L2 3117 3272 0 21 36 0 0 chr20 63408779 63408807 -8745075 + AT_rich Low_complexity Low_complexity 1 28 0 456 264 54 60 chr20 63408833 63409000 -8744882 - MER5B DNA MER1_type -12 166 1 200 309 83 0 chr20 63409070 63409154 -8744728 - MER5B DNA MER1_type -78 100 10 396 247 240 0 chr20 63409466 63409612 -8744270 - MER5A DNA MER1_type 0 189 9 434 288 7 36 chr20 63410022 63410161 -8743721 + MIR SINE MIR 127 261 -1 21 0 0 0 chr20 63410426 63410447 -8743435 + AT_rich Low_complexity Low_complexity 1 21 0 457 253 30 105 chr20 63410447 63410826 -8743056 - L1ME3 LINE L1 0 6162 5810 * 2597 222 88 15 chr20 63410795 63411981 -8741901 - L1ME1 LINE L1 -3089 3126 1900 46 62 0 0 chr20 63412034 63412115 -8741767 + AT_rich Low_complexity Low_complexity 1 81 0 486 209 9 35 chr20 63412115 63412230 -8741652 - L1ME1 LINE L1 -5571 825 714 239 289 0 0 chr20 63412237 63412289 -8741593 + Tigger7 DNA MER2_type 4 55 -2432 1168 172 29 0 chr20 63412295 63412499 -8741383 + MER2 DNA MER2_type 1 210 -135 22 56 0 0 chr20 63412529 63412565 -8741317 + AT_rich Low_complexity Low_complexity 1 36 0 1295 150 73 24 chr20 63412613 63412859 -8741023 + Tigger7 DNA MER2_type 2234 2491 0 1920 271 39 37 chr20 63412860 63413529 -8740353 - L1ME1 LINE L1 -5688 708 39 332 328 69 19 chr20 63413601 63413849 -8740033 - L1MC4a LINE L1 -161 5960 5698 192 77 0 0 chr20 63413850 63413876 -8740006 + (TC)n Simple_repeat Simple_repeat 2 27 0 21 36 0 0 chr20 63413963 63413991 -8739891 + AT_rich Low_complexity Low_complexity 1 28 0 641 229 60 27 chr20 63414041 63414224 -8739658 - MIR SINE MIR -47 215 27 679 282 64 27 chr20 63414257 63414555 -8739327 - L1MC4a LINE L1 -1915 5893 5585 788 289 111 42 chr20 63416065 63416626 -8737256 - L2 LINE L2 -15 3298 2698 954 224 151 20 chr20 63416628 63416932 -8736950 - MER2 DNA MER2_type 0 345 2 694 228 8 0 chr20 63416943 63417095 -8736787 + L1ME1 LINE L1 6023 6183 -1 437 322 51 11 chr20 63417107 63417284 -8736598 - L2 LINE L2 -629 2685 2502 272 325 4 107 chr20 63417386 63417620 -8736262 + L2 LINE L2 2497 2706 -608 239 222 148 25 chr20 63417621 63417702 -8736180 - L2 LINE L2 -5 3308 3218 412 196 101 94 chr20 63417708 63417798 -8736084 + Charlie7 DNA MER1_type 317 410 -2202 2162 119 3 0 chr20 63417798 63418091 -8735791 + AluSx SINE Alu 1 294 -18 412 196 101 94 chr20 63418091 63418138 -8735744 + Charlie7 DNA MER1_type 410 455 -2157 517 254 105 24 chr20 63418143 63418554 -8735328 + Charlie7 DNA MER1_type 2086 2610 -2 200 352 84 34 chr20 63419194 63419373 -8734509 - MIR SINE MIR -12 250 63 2002 224 91 4 chr20 63420758 63421231 -8732651 - LTR40a LTR ERVL 0 519 6 1641 32 0 0 chr20 63422469 63422658 -8731224 - L1PA4 LINE L1 -265 5890 5702 1753 44 5 0 chr20 63422658 63422862 -8731020 + L1PA4 LINE L1 5946 6152 -3 212 385 8 0 chr20 63424522 63424639 -8729243 - MIR SINE MIR -25 237 120 335 249 3 61 chr20 63425351 63425450 -8728432 + AluJ/FRAM SINE Alu 216 293 -9 25 51 0 0 chr20 63425551 63425590 -8728292 + AT_rich Low_complexity Low_complexity 1 39 0 2430 54 0 7 chr20 63425753 63426049 -8727833 - AluY SINE Alu -17 294 1 4659 74 5 0 chr20 63426074 63426640 -8727242 - L1PA10 LINE L1 -12 6156 5588 2188 101 18 0 chr20 63426640 63427005 -8726877 + L1PA10 LINE L1 5194 5563 -605 200 268 54 0 chr20 63427127 63427183 -8726699 + L2 LINE L2 3206 3264 -8 307 326 114 5 chr20 63427225 63427418 -8726464 - MIR SINE MIR 0 262 49 279 0 0 0 chr20 63428221 63428252 -8725630 + (TG)n Simple_repeat Simple_repeat 2 32 0 330 313 99 16 chr20 63428454 63428636 -8725246 + MIR SINE MIR 49 245 -17 1033 255 63 4 chr20 63428820 63429091 -8724791 + MLT1F1 LTR MaLR 278 564 -3 1820 136 0 14 chr20 63429172 63429451 -8724431 - AluJb SINE Alu -37 275 1 352 293 164 24 chr20 63429491 63429699 -8724183 + L2 LINE L2 3077 3313 0 481 44 29 0 chr20 63431087 63431155 -8722727 + AluY SINE Alu 243 312 0 543 207 233 7 chr20 63431454 63431604 -8722278 + MER5A DNA MER1_type 1 184 -5 478 241 108 0 chr20 63432296 63432454 -8721428 + MLT1L LTR MaLR 188 362 -253 225 271 47 0 chr20 63432536 63432621 -8721261 + MLT1L LTR MaLR 495 583 -32 1739 152 43 17 chr20 63433242 63433543 -8720339 - Tigger3b DNA MER2_type 0 1231 923 2581 97 8 27 chr20 63433543 63433914 -8719968 - THE1B LTR MaLR 0 364 1 * 3876 119 39 17 chr20 63433914 63434555 -8719327 - Tigger3b DNA MER2_type -304 927 273 494 196 62 0 chr20 63434551 63434648 -8719234 - Tigger3b DNA MER2_type -1128 103 1 * 219 114 0 0 chr20 63434818 63434853 -8719029 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2022 145 0 0 chr20 63434855 63435137 -8718745 - AluSx SINE Alu -29 283 2 511 327 47 32 chr20 63435440 63435718 -8718164 - L2 LINE L2 -227 3086 2805 267 225 72 36 chr20 63436066 63436177 -8717705 - MER103 DNA DNA -20 146 32 280 129 14 14 chr20 63436401 63436471 -8717411 + (TTAA)n Simple_repeat Simple_repeat 3 72 0 1418 221 32 10 chr20 63436520 63436880 -8717002 - MLT1E3 LTR MaLR 0 610 222 2011 168 55 16 chr20 63436900 63437281 -8716601 - L1MA5 LINE L1 -2 6298 5903 229 289 0 0 chr20 63437712 63437764 -8716118 - L2 LINE L2 -11 3261 3210 * 310 309 53 0 chr20 63437762 63437856 -8716026 - MIR SINE MIR -118 144 46 211 111 0 28 chr20 63438564 63438600 -8715282 + MIR SINE MIR 112 146 -62 351 246 42 34 chr20 63438703 63438821 -8715061 + MER103 DNA DNA 38 156 -10 26 30 0 0 chr20 63439286 63439319 -8714563 + AT_rich Low_complexity Low_complexity 1 33 0 296 258 146 26 chr20 63439358 63439509 -8714373 - MIR SINE MIR -15 247 79 336 315 107 30 chr20 63439520 63439613 -8714269 + MIR SINE MIR 51 135 -127 197 62 0 31 chr20 63439613 63439645 -8714237 + (TAA)n Simple_repeat Simple_repeat 2 32 0 336 315 107 30 chr20 63439645 63439748 -8714134 + MIR SINE MIR 135 262 0 26 0 0 0 chr20 63439820 63439846 -8714036 + AT_rich Low_complexity Low_complexity 1 26 0 330 317 92 21 chr20 63440038 63440278 -8713604 + L1ME LINE L1 5521 5777 -393 231 36 0 0 chr20 63441533 63441561 -8712321 + (TTTTA)n Simple_repeat Simple_repeat 2 29 0 3010 149 7 75 chr20 63441561 63441978 -8711904 - L1MB1 LINE L1 -10 6158 5791 249 33 0 0 chr20 63441978 63442008 -8711874 + (TA)n Simple_repeat Simple_repeat 2 31 0 3010 149 7 75 chr20 63442008 63442173 -8711709 - L1MB1 LINE L1 -377 5791 5616 1487 173 116 8 chr20 63442177 63442653 -8711229 + L1MB1 LINE L1 5123 5647 -665 378 0 0 0 chr20 63442677 63442719 -8711163 + (CA)n Simple_repeat Simple_repeat 1 42 0 25 0 0 0 chr20 63443058 63443083 -8710799 + AT_rich Low_complexity Low_complexity 1 25 0 419 318 31 16 chr20 63443761 63443890 -8709992 - L2 LINE L2 0 3272 3142 699 267 5 16 chr20 63443971 63444162 -8709720 - MER5A DNA MER1_type 0 189 1 983 76 0 0 chr20 63444187 63444306 -8709576 + AluSx SINE Alu 1 119 -194 1312 124 0 0 chr20 63444496 63444681 -8709201 + AluSx SINE Alu 118 302 -8 2109 154 38 22 chr20 63444683 63445052 -8708830 - THE1C LTR MaLR 0 375 1 288 330 11 11 chr20 63445052 63445143 -8708739 - L2 LINE L2 -224 3048 2958 468 244 65 8 chr20 63445145 63445268 -8708614 + MER5C DNA MER1_type 1 130 -194 1854 241 43 72 chr20 63446089 63446814 -8707068 - L1MC4 LINE L1 -1 8041 7338 222 271 20 99 chr20 63446983 63447134 -8706748 - L2 LINE L2 -96 3217 3079 438 315 78 42 chr20 63447146 63447530 -8706352 - L2 LINE L2 -86 3227 2830 449 136 71 71 chr20 63447533 63447702 -8706180 + (GAGTG)n Simple_repeat Simple_repeat 3 171 0 323 256 91 61 chr20 63447702 63447932 -8705950 - L2 LINE L2 -429 2885 2649 211 311 97 29 chr20 63448165 63448268 -8705614 + L2 LINE L2 3202 3311 -2 590 300 108 30 chr20 63448326 63448800 -8705082 + MLT2F LTR ERVL 4 514 -149 405 0 0 0 chr20 63449282 63449327 -8704555 + (CA)n Simple_repeat Simple_repeat 2 46 0 1936 139 4 0 chr20 63449460 63449761 -8704121 + AluSx SINE Alu 1 302 0 222 400 120 5 chr20 63449824 63450024 -8703858 + MIR SINE MIR 12 234 -28 506 213 94 8 chr20 63450041 63450168 -8703714 + MIR SINE MIR 60 197 -65 784 217 47 42 chr20 63450190 63450377 -8703505 + MIR SINE MIR 48 238 -24 427 39 0 0 chr20 63450377 63450429 -8703453 + L1PA6 LINE L1 6102 6153 -1 784 217 47 42 chr20 63450429 63450453 -8703429 + MIR SINE MIR 238 260 -2 1283 109 16 0 chr20 63450683 63450867 -8703015 - AluSg/x SINE Alu -1 309 123 647 161 115 0 chr20 63451050 63451180 -8702702 + L1MA9 LINE L1 6167 6311 -1 970 187 55 55 chr20 63451630 63451849 -8702033 + MER20 DNA MER1_type 1 219 0 1157 250 48 51 chr20 63451920 63452292 -8701590 - MLT1A2 LTR MaLR 0 374 4 799 212 96 10 chr20 63452319 63452517 -8701365 - MIR SINE MIR -30 232 18 545 167 167 50 chr20 63452558 63452756 -8701126 + ORSL DNA AcHobo 55 275 0 265 244 37 146 chr20 63452812 63452976 -8700906 - Charlie8 DNA MER1_type -2152 265 120 450 224 14 7 chr20 63453021 63453164 -8700718 + GA-rich Low_complexity Low_complexity 2 145 0 408 266 109 8 chr20 63453186 63453314 -8700568 + MIR SINE MIR 15 155 -107 789 274 69 31 chr20 63453417 63453734 -8700148 - MER102b DNA MER1_type -9 332 4 573 252 25 110 chr20 63454352 63454500 -8699382 - MER102b DNA MER1_type -1135 293 185 2217 120 0 0 chr20 63454500 63454799 -8699083 - AluSx SINE Alu -13 299 1 573 252 25 110 chr20 63454799 63454967 -8698915 - MER102b DNA MER1_type -1243 185 4 225 0 0 0 chr20 63455341 63455366 -8698516 + (T)n Simple_repeat Simple_repeat 1 25 0 243 170 0 0 chr20 63455932 63455979 -8697903 + (CA)n Simple_repeat Simple_repeat 2 48 0 250 211 297 40 chr20 63456167 63456342 -8697540 + MIR SINE MIR 8 227 -35 198 103 0 0 chr20 63457537 63457566 -8696316 + (CA)n Simple_repeat Simple_repeat 2 30 0 2088 100 28 17 chr20 63457697 63457988 -8695894 - AluSx SINE Alu -18 294 1 1950 133 0 3 chr20 63458473 63458759 -8695123 + AluJo SINE Alu 7 291 -21 375 217 33 33 chr20 63458857 63458949 -8694933 + L2 LINE L2 3203 3294 -19 725 248 25 0 chr20 63458979 63459140 -8694742 + MIR SINE MIR 2 166 -96 29 0 0 0 chr20 63459272 63459301 -8694581 + AT_rich Low_complexity Low_complexity 1 29 0 234 0 0 0 chr20 63459343 63459369 -8694513 + (TG)n Simple_repeat Simple_repeat 2 27 0 218 93 0 23 chr20 63459460 63459503 -8694379 + (TTTAA)n Simple_repeat Simple_repeat 4 45 0 2201 97 7 0 chr20 63459510 63459798 -8694084 - AluSp SINE Alu -23 290 1 207 0 0 0 chr20 63460053 63460076 -8693806 + (A)n Simple_repeat Simple_repeat 1 23 0 227 83 0 62 chr20 63460795 63460843 -8693039 + (T)n Simple_repeat Simple_repeat 1 45 0 292 346 74 41 chr20 63461744 63462013 -8691869 - L2 LINE L2 -49 3223 2946 230 267 139 0 chr20 63462098 63462184 -8691698 + MIR SINE MIR 74 171 -91 22 0 0 0 chr20 63462354 63462376 -8691506 + AT_rich Low_complexity Low_complexity 1 22 0 917 184 31 63 chr20 63462404 63462451 -8691431 - L1MB1 LINE L1 0 6168 6121 2853 117 2 5 chr20 63462451 63462854 -8691028 - L1PA13 LINE L1 -3 6160 5759 917 184 31 63 chr20 63462854 63463029 -8690853 - L1MB1 LINE L1 -47 6121 5953 331 300 29 50 chr20 63463395 63463535 -8690347 - MLT1L LTR MaLR -53 562 426 249 307 112 44 chr20 63463602 63463807 -8690075 - MLT1L LTR MaLR -371 244 26 777 274 89 61 chr20 63464111 63464170 -8689712 - LTR33 LTR ERVL 0 521 465 4710 61 0 11 chr20 63464170 63464743 -8689139 - L1PA7 LINE L1 0 6154 5588 777 274 89 61 chr20 63464743 63465176 -8688706 - LTR33 LTR ERVL -56 465 15 273 199 12 41 chr20 63465332 63465432 -8688450 + CT-rich Low_complexity Low_complexity 1 97 0 679 297 79 58 chr20 63466899 63467293 -8686589 - L2 LINE L2 -1 3312 2911 347 302 33 55 chr20 63467277 63467459 -8686423 - L2 LINE L2 -339 2975 2798 * 1054 274 181 12 chr20 63467519 63467621 -8686261 + L2 LINE L2 970 1053 -2261 2150 259 52 19 chr20 63467621 63468145 -8685737 - MLT1F LTR MaLR -1 541 1 1054 274 181 12 chr20 63468145 63468527 -8685355 + L2 LINE L2 1053 1536 -1778 2494 121 28 28 chr20 63468537 63468901 -8684981 - THE1B LTR MaLR 0 364 1 1587 220 68 53 chr20 63468901 63469356 -8684526 - MLT1C LTR MaLR -3 464 3 2727 306 96 15 chr20 63469357 63470978 -8682904 + L2 LINE L2 1534 3301 -12 258 286 10 25 chr20 63470996 63471117 -8682765 + CT-rich Low_complexity Low_complexity 1 119 0 24 0 0 0 chr20 63471525 63471549 -8682333 + AT_rich Low_complexity Low_complexity 1 24 0 260 119 24 0 chr20 63471716 63471758 -8682124 - Charlie8 DNA MER1_type -2144 273 231 1733 230 49 3 chr20 63472438 63472786 -8681096 - MLT1A1 LTR MaLR 0 365 2 618 260 54 50 chr20 63472986 63473228 -8680654 + MIR SINE MIR 10 252 -10 315 333 25 8 chr20 63473729 63473849 -8680033 - L2 LINE L2 0 3272 3151 23 0 0 0 chr20 63474046 63474069 -8679813 + AT_rich Low_complexity Low_complexity 1 23 0 1237 208 14 5 chr20 63474681 63474897 -8678985 + MER20 DNA MER1_type 2 219 0 1509 227 27 11 chr20 63474909 63475201 -8678681 + MLT1F LTR MaLR 172 473 -69 2146 153 12 24 chr20 63475201 63475542 -8678340 - MER1B DNA MER1_type 0 337 1 1509 227 27 11 chr20 63475542 63475614 -8678268 + MLT1F LTR MaLR 473 542 0 507 303 154 0 chr20 63475786 63475994 -8677888 + MIR SINE MIR 17 256 -6 418 212 40 20 chr20 63476231 63476330 -8677552 - MER96B DNA MER1_type? -21 396 296 254 135 0 0 chr20 63476342 63476379 -8677503 + MER58A DNA MER1_type 37 73 -34 21 0 0 0 chr20 63476742 63476763 -8677119 + AT_rich Low_complexity Low_complexity 1 21 0 699 65 97 0 chr20 63476763 63476856 -8677026 - L1PB1 LINE L1 -1 6150 6049 484 323 170 14 chr20 63476893 63477252 -8676630 + L1M4 LINE L1 3083 3497 -2649 256 231 33 66 chr20 63477269 63477360 -8676522 + MER45 DNA AcHobo 1 88 -865 702 167 9 0 chr20 63477402 63477516 -8676366 - AluJo/FRAM SINE Alu -1 311 197 1532 154 0 21 chr20 63477516 63477756 -8676126 - AluJo SINE Alu -77 235 1 223 230 16 40 chr20 63477771 63477897 -8675985 + (TTATA)n Simple_repeat Simple_repeat 5 127 0 318 203 17 0 chr20 63477900 63477959 -8675923 + MER45 DNA AcHobo 1522 1581 0 1969 102 0 0 chr20 63478608 63478863 -8675019 + AluSx SINE Alu 50 304 -8 579 178 25 0 chr20 63478938 63479051 -8674831 - MLT1E LTR MaLR -393 174 57 227 200 20 0 chr20 63479382 63479432 -8674450 - HSMAR1 DNA Mariner 0 1287 1237 293 382 0 0 chr20 63479515 63479617 -8674265 - MER117 DNA MER1_type -68 129 28 341 246 148 41 chr20 63480280 63480402 -8673480 + MIR SINE MIR 17 151 -57 233 225 108 67 chr20 63480684 63480804 -8673078 - Charlie8 DNA MER1_type -2210 207 83 759 263 39 42 chr20 63480811 63481037 -8672845 - MIR SINE MIR -3 259 33 2221 107 3 7 chr20 63481037 63481337 -8672545 - AluSq SINE Alu -14 299 1 759 263 39 42 chr20 63481337 63481369 -8672513 - MIR SINE MIR -229 33 2 195 42 0 0 chr20 63481374 63481398 -8672484 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 565 200 65 2 chr20 63481414 63481545 -8672337 - L1MC4 LINE L1 -3 8039 7648 453 50 0 0 chr20 63481553 63481613 -8672269 + (CA)n Simple_repeat Simple_repeat 2 61 0 1556 209 12 82 chr20 63481614 63482026 -8671856 + L1MC4 LINE L1 6705 7087 -955 756 87 0 0 chr20 63482043 63482135 -8671747 + AluSc SINE Alu 18 109 -200 256 273 91 34 chr20 63482240 63482328 -8671554 + L2 LINE L2 3165 3257 -15 213 323 15 0 chr20 63482707 63482772 -8671110 + GA-rich Low_complexity Low_complexity 1 66 0 900 79 94 0 chr20 63483212 63483339 -8670543 - MER85 DNA T2_type 0 139 1 2030 124 31 0 chr20 63483537 63483827 -8670055 - AluSq SINE Alu -14 299 1 273 299 13 0 chr20 63483861 63483938 -8669944 + MIR SINE MIR 48 125 -137 1927 120 3 3 chr20 63484236 63484519 -8669363 - MER41B LTR ERV1 -88 547 265 239 173 0 19 chr20 63484698 63484750 -8669132 - L1MC4 LINE L1 -860 7182 7132 1397 65 0 85 chr20 63484757 63484957 -8668925 - AluSc SINE Alu -20 289 107 652 323 30 9 chr20 63484976 63485208 -8668674 + MIR SINE MIR 25 261 -1 596 269 92 18 chr20 63485363 63485675 -8668207 + LTR16A1 LTR ERVL 82 401 -56 210 307 102 55 chr20 63485765 63486146 -8667736 - L2 LINE L2 -338 2976 2578 288 91 0 0 chr20 63487243 63487287 -8666595 + (CA)n Simple_repeat Simple_repeat 1 44 0 396 0 0 0 chr20 63488141 63488185 -8665697 + (A)n Simple_repeat Simple_repeat 1 44 0 2283 98 0 16 chr20 63488655 63488961 -8664921 + AluSg SINE Alu 3 303 -7 268 235 59 0 chr20 63489315 63489383 -8664499 + MER58A DNA MER1_type 11 82 -25 1298 261 124 16 chr20 63489386 63489925 -8663957 + MLT1E2 LTR MaLR 5 626 0 778 217 13 7 chr20 63489925 63490070 -8663812 + MER58A DNA MER1_type 78 223 -1 472 256 67 31 chr20 63490101 63490337 -8663545 - MIR SINE MIR -8 254 3 534 278 98 26 chr20 63490913 63491147 -8662735 - MIR SINE MIR -8 254 4 2211 103 20 3 chr20 63492599 63492891 -8660991 - AluSx SINE Alu -15 297 1 945 216 19 5 chr20 63492922 63493130 -8660752 + L1MD2 LINE L1 6145 6355 -4 786 305 123 22 chr20 63494140 63494742 -8659140 + L2 LINE L2 2622 3291 -22 510 256 58 0 chr20 63494755 63494892 -8658990 - L2 LINE L2 -1 3312 3168 306 0 0 0 chr20 63495422 63495456 -8658426 + (T)n Simple_repeat Simple_repeat 1 34 0 474 255 181 7 chr20 63496266 63496415 -8657467 - MER5A DNA MER1_type -6 183 9 639 281 103 0 chr20 63496673 63496876 -8657006 + MIR SINE MIR 5 228 -34 362 200 47 141 chr20 63496989 63497138 -8656744 - MIR SINE MIR -96 166 33 2146 124 0 0 chr20 63497138 63497437 -8656445 - AluSx SINE Alu -13 299 1 362 200 47 141 chr20 63497437 63497457 -8656425 - MIR SINE MIR -229 33 13 254 271 0 0 chr20 63498090 63498160 -8655722 + MER113 DNA MER1_type? 7 76 -445 2419 109 66 19 chr20 63498305 63498772 -8655110 + MER1A DNA MER1_type 1 529 0 457 264 74 58 chr20 63499576 63499834 -8654048 - L1MC4 LINE L1 0 8042 7781 1461 182 34 47 chr20 63499951 63500248 -8653634 + AluJb SINE Alu 1 293 -19 233 294 0 29 chr20 63500472 63500540 -8653342 - MER113 DNA MER1_type? -3 518 453 745 171 54 16 chr20 63500562 63500691 -8653191 + AluSq/x SINE Alu 2 135 -177 1965 130 7 10 chr20 63500691 63500991 -8652891 + AluSx SINE Alu 1 299 -13 189 312 91 45 chr20 63501061 63501282 -8652600 + L2 LINE L2 2667 2897 -417 897 263 56 76 chr20 63501493 63501919 -8651963 + L2 LINE L2 2686 3093 -220 1673 192 0 28 chr20 63501919 63501933 -8651949 - AluJb SINE Alu 0 312 299 1053 121 0 0 chr20 63501933 63502098 -8651784 + (TTCC)n Simple_repeat Simple_repeat 4 168 0 1673 192 0 28 chr20 63502098 63502401 -8651481 - AluJb SINE Alu -13 299 4 897 263 56 76 chr20 63502401 63502612 -8651270 + L2 LINE L2 3093 3307 -6 288 262 41 90 chr20 63503324 63503446 -8650436 + MIR SINE MIR 12 128 -80 390 286 93 39 chr20 63503468 63503650 -8650232 - MIR SINE MIR -2 260 69 614 323 23 53 chr20 63503714 63504014 -8649868 + MER102b DNA MER1_type 50 340 -1 208 344 72 0 chr20 63504230 63504355 -8649527 + L2 LINE L2 2897 3030 -242 * 661 259 35 15 chr20 63504352 63504549 -8649333 - MIR SINE MIR -41 221 21 195 100 0 0 chr20 63507683 63507713 -8646169 + (T)n Simple_repeat Simple_repeat 1 30 0 340 280 0 0 chr20 63507848 63507941 -8645941 + MIR SINE MIR 170 262 0 186 312 13 13 chr20 63508710 63508787 -8645095 - MIR SINE MIR -21 241 165 214 103 77 0 chr20 63508789 63508828 -8645054 + A-rich Low_complexity Low_complexity 4 45 0 218 316 26 43 chr20 63508829 63508946 -8644936 - MIR SINE MIR -71 137 23 2489 74 7 0 chr20 63509149 63509448 -8644434 + AluSx SINE Alu 1 301 -11 2102 123 0 3 chr20 63510298 63510582 -8643300 + AluSx SINE Alu 1 283 -29 2150 117 7 3 chr20 63510851 63511150 -8642732 + AluSx SINE Alu 1 300 -12 333 316 110 0 chr20 63511809 63511945 -8641937 + MER91A DNA MER1_type 1 151 -45 343 191 131 0 chr20 63512197 63512281 -8641601 + MER96B DNA MER1_type? 81 175 0 399 248 9 9 chr20 63512973 63513086 -8640796 - MER96B DNA MER1_type? -13 404 292 787 217 5 26 chr20 63513087 63513276 -8640606 + MER96B DNA MER1_type? 231 415 -2 418 297 12 12 chr20 63513451 63513616 -8640266 - MIR SINE MIR -88 174 10 316 289 94 40 chr20 63513968 63514117 -8639765 - MIR SINE MIR -71 191 35 206 339 17 42 chr20 63515606 63515724 -8638158 + MIR SINE MIR 22 136 -126 2240 121 0 0 chr20 63515852 63516150 -8637732 - AluSx SINE Alu -10 302 5 4157 232 42 9 chr20 63517051 63517948 -8635934 - MER45B DNA AcHobo -541 1040 109 2233 131 8 122 chr20 63517948 63518438 -8635444 + Tigger2a DNA MER2_type 1 434 0 4157 232 42 9 chr20 63518438 63518492 -8635390 - MER45B DNA AcHobo -1472 109 58 717 320 13 0 chr20 63519254 63519485 -8634397 + MIR SINE MIR 15 248 -14 245 313 25 12 chr20 63519482 63519562 -8634320 - MIR SINE MIR -170 92 12 * 319 309 74 25 chr20 63520034 63520277 -8633605 + MIR SINE MIR 8 262 0 1906 84 0 0 chr20 63520375 63520602 -8633280 - AluSc SINE Alu -19 290 64 302 255 51 20 chr20 63520741 63520839 -8633043 + MIR SINE MIR 47 147 -115 940 196 48 0 chr20 63521002 63521211 -8632671 - MER20 DNA MER1_type 0 219 1 1810 173 37 0 chr20 63521552 63521905 -8631977 + L1MB3 LINE L1 5816 6181 -2 366 163 12 25 chr20 63521910 63521990 -8631892 + MER53 DNA DNA 35 113 -76 * 513 130 14 130 chr20 63521988 63522126 -8631756 - MER53 DNA DNA -67 122 1 493 314 51 5 chr20 63522188 63522406 -8631476 - MLT1L LTR MaLR -10 605 277 415 266 37 53 chr20 63522500 63522686 -8631196 - MLT1L LTR MaLR -285 330 148 1011 160 33 17 chr20 63522686 63522867 -8631015 - MER58A DNA MER1_type 0 224 41 439 205 126 46 chr20 63522923 63523074 -8630808 + MIR SINE MIR 20 182 -80 2283 76 40 7 chr20 63523164 63523465 -8630417 + AluSx SINE Alu 1 311 -1 2266 154 51 67 chr20 63523475 63524028 -8629854 + Charlie1 DNA MER1_type 2217 2760 -1 298 294 0 20 chr20 63524329 63524431 -8629451 - L1ME LINE L1 -448 5673 5574 216 97 0 0 chr20 63524503 63524534 -8629348 + (TGGA)n Simple_repeat Simple_repeat 4 34 0 1879 155 0 23 chr20 63524922 63525231 -8628651 - AluJo SINE Alu -10 302 1 354 312 89 56 chr20 63525231 63525500 -8628382 + Charlie8 DNA MER1_type 81 358 -2059 29 28 0 0 chr20 63525605 63525641 -8628241 + AT_rich Low_complexity Low_complexity 1 36 0 1109 169 0 26 chr20 63525760 63525955 -8627927 + AluJo SINE Alu 98 287 -25 229 179 0 0 chr20 63526003 63526042 -8627840 + Charlie8 DNA MER1_type 1390 1428 -989 870 227 93 85 chr20 63526357 63526666 -8627216 + MER113 DNA MER1_type? 1 317 -204 2379 94 0 7 chr20 63526666 63526975 -8626907 + AluSg SINE Alu 2 308 -2 870 227 93 85 chr20 63526975 63527181 -8626701 + MER113 DNA MER1_type? 317 520 -1 328 274 59 0 chr20 63527365 63527467 -8626415 - MIR SINE MIR -116 146 39 289 340 0 0 chr20 63527932 63528032 -8625850 + (TCCA)n Simple_repeat Simple_repeat 1 100 0 881 167 11 0 chr20 63528043 63528310 -8625572 + (TCCA)n Simple_repeat Simple_repeat 1 270 0 312 358 28 83 chr20 63528314 63528674 -8625208 - L2 LINE L2 -5 3267 2928 623 206 91 12 chr20 63529353 63529518 -8624364 + MIR SINE MIR 80 257 -5 529 287 39 30 chr20 63529543 63529560 -8624322 + MIR SINE MIR 4 19 -243 1033 39 86 0 chr20 63529560 63529688 -8624194 - MER85 DNA T2_type 0 139 1 529 287 39 30 chr20 63529688 63529900 -8623982 + MIR SINE MIR 19 235 -27 429 354 27 14 chr20 63530253 63530476 -8623406 + MIR SINE MIR 25 250 -12 2105 89 53 0 chr20 63531114 63531396 -8622486 - AluSc SINE Alu -12 297 1 421 309 27 58 chr20 63531458 63531646 -8622236 - LTR33 LTR ERVL -337 184 3 202 352 64 16 chr20 63532738 63532863 -8621019 + L2 LINE L2 3134 3264 -8 2425 150 23 77 chr20 63532981 63533462 -8620420 + LTR32 LTR ERVL 17 471 0 755 298 94 46 chr20 63533616 63534032 -8619850 - MLT1L LTR MaLR 0 615 180 1645 167 49 3 chr20 63534833 63535121 -8618761 + AluJb SINE Alu 1 301 -11 212 257 115 9 chr20 63535131 63535244 -8618638 + MIR SINE MIR 137 261 -1 282 138 23 46 chr20 63535630 63535717 -8618165 + (TCTA)n Simple_repeat Simple_repeat 2 86 0 195 114 0 0 chr20 63535915 63535950 -8617932 + (CTATT)n Simple_repeat Simple_repeat 3 37 0 180 219 24 0 chr20 63536257 63536298 -8617584 - MER5B DNA MER1_type 0 178 137 1609 231 78 36 chr20 63536355 63536408 -8617474 - L1M4 LINE L1 -3857 2525 2476 2151 108 0 21 chr20 63536408 63536718 -8617164 + AluSx SINE Alu 1 304 0 1609 231 78 36 chr20 63536718 63537219 -8616663 - L1M4 LINE L1 -3906 2476 1950 232 204 0 19 chr20 63537236 63537290 -8616592 + MER5B DNA MER1_type 122 174 -4 222 344 16 16 chr20 63538383 63538477 -8615405 - MIR SINE MIR -65 197 101 786 52 191 0 chr20 63538477 63538592 -8615290 + MER85 DNA T2_type 1 137 -2 222 344 16 16 chr20 63538592 63538625 -8615257 - MIR SINE MIR -160 102 70 189 0 0 0 chr20 63538789 63538810 -8615072 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 1434 63 0 11 chr20 63538821 63539011 -8614871 - L1PA5 LINE L1 -1 6153 5966 246 218 92 11 chr20 63539110 63539197 -8614685 - MER113 DNA MER1_type? -409 112 19 2357 106 0 3 chr20 63539235 63539546 -8614336 + AluSq SINE Alu 1 310 -3 454 234 38 7 chr20 63539744 63539889 -8613993 + MIR3 SINE MIR 46 201 -7 280 221 14 172 chr20 63539962 63540044 -8613838 + MIR SINE MIR 7 58 -204 2265 103 3 10 chr20 63540044 63540354 -8613528 - AluSg SINE Alu -2 308 1 280 221 14 172 chr20 63540354 63540416 -8613466 + MIR SINE MIR 58 128 -134 517 238 107 12 chr20 63540865 63541033 -8612849 + MER5A DNA MER1_type 6 189 0 197 295 32 11 chr20 63541105 63541200 -8612682 + MER5A DNA MER1_type 14 110 -79 263 293 12 12 chr20 63541248 63541330 -8612552 + CT-rich Low_complexity Low_complexity 1 82 0 1714 162 7 0 chr20 63541423 63541695 -8612187 + AluJb SINE Alu 22 295 -17 2306 270 68 21 chr20 63541800 63543520 -8610362 - L1MEc LINE L1 -2510 3705 1905 25 31 0 0 chr20 63543610 63543642 -8610240 + AT_rich Low_complexity Low_complexity 1 32 0 1769 155 9 25 chr20 63544074 63544391 -8609491 + AluJb SINE Alu 1 312 0 199 277 0 0 chr20 63544664 63544711 -8609171 - MIR SINE MIR -109 153 107 313 231 69 64 chr20 63544956 63545129 -8608753 + L1 LINE L1 4255 4428 -1718 3970 133 53 2 chr20 63546071 63546678 -8607204 + LTR28 LTR ERV1 1 638 -382 1732 124 34 0 chr20 63546796 63547120 -8606762 + Tigger4(Zombi) DNA MER2_type 1 2728 -3 2516 75 0 0 chr20 63547323 63547629 -8606253 + AluY SINE Alu 1 306 -5 1039 243 5 0 chr20 63548606 63548828 -8605054 - MER58A DNA MER1_type -1 223 1 1721 143 0 4 chr20 63549444 63549758 -8604124 - AluSx SINE Alu 0 352 40 1765 28 5 5 chr20 63551274 63551488 -8602394 + L1PA2 LINE L1 5942 6155 0 791 213 27 21 chr20 63551804 63551992 -8601890 + MER5A DNA MER1_type 1 189 0 217 321 89 18 chr20 63552034 63552146 -8601736 + MER5B DNA MER1_type 1 120 -58 180 326 112 0 chr20 63552443 63552532 -8601350 - MIR SINE MIR -44 218 120 2201 151 30 0 chr20 63552534 63552906 -8600976 - Tigger4(Zombi) DNA MER2_type 0 2731 2349 2115 116 50 30 chr20 63552906 63553267 -8600615 + THE1C LTR MaLR 1 368 -7 769 144 8 0 chr20 63553267 63553399 -8600483 - Tigger4(Zombi) DNA MER2_type -377 2354 2222 764 154 6 91 chr20 63553397 63553572 -8600310 - Tigger4(Zombi) DNA MER2_type -2571 160 1 * 265 290 13 19 chr20 63553576 63553683 -8600199 - MIR SINE MIR -102 106 14 411 320 86 9 chr20 63553692 63553914 -8599968 + MIR SINE MIR 3 241 -21 220 256 0 0 chr20 63554218 63554261 -8599621 + polypurine Low_complexity Low_complexity 3 45 0 1561 185 3 49 chr20 63554384 63554701 -8599181 + AluJb SINE Alu 1 294 -18 189 0 0 0 chr20 63554771 63554792 -8599090 + (A)n Simple_repeat Simple_repeat 1 21 0 225 154 0 0 chr20 63556206 63556245 -8597637 + A-rich Low_complexity Low_complexity 1 39 0 1161 317 53 21 chr20 63556545 63557012 -8596870 - MLT1K LTR MaLR -7 581 100 260 278 139 35 chr20 63558204 63558348 -8595534 - L2 LINE L2 -6 3307 3149 253 243 52 29 chr20 63558562 63558698 -8595184 + L1MC5 LINE L1 7512 7650 -311 180 0 0 0 chr20 63558700 63558720 -8595162 + (TG)n Simple_repeat Simple_repeat 2 21 0 2077 151 22 19 chr20 63558759 63559169 -8594713 - L1MA8 LINE L1 -2 6289 5879 1504 216 87 2 chr20 63559170 63559606 -8594276 + L1M4 LINE L1 4038 4510 -1636 22 56 0 0 chr20 63559736 63559772 -8594110 + AT_rich Low_complexity Low_complexity 1 36 0 320 208 42 0 chr20 63559784 63559856 -8594026 + MIR SINE MIR 62 136 -126 1166 251 92 44 chr20 63559891 63560433 -8593449 - L1MC5 LINE L1 -48 7913 7346 311 288 92 38 chr20 63560629 63560813 -8593069 - L1MC5 LINE L1 -756 7205 7012 697 188 7 49 chr20 63560884 63561028 -8592854 + Tigger7 DNA MER2_type 9 146 -404 334 305 17 16 chr20 63561035 63561162 -8592720 + L1MC5 LINE L1 6761 6968 -1074 455 246 46 15 chr20 63561164 63561294 -8592588 + Tigger7 DNA MER2_type 131 264 -469 180 0 0 0 chr20 63561381 63561401 -8592481 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 858 316 7 4 chr20 63561420 63561698 -8592184 - L1MC4 LINE L1 -1064 6978 6700 1060 179 102 12 chr20 63561865 63562011 -8591871 - L1MA9 LINE L1 -1 6311 6180 228 111 0 0 chr20 63562011 63562047 -8591835 + (TG)n Simple_repeat Simple_repeat 1 36 0 1060 179 102 12 chr20 63562047 63562168 -8591714 - L1MA9 LINE L1 -132 6180 6031 1207 296 145 24 chr20 63562327 63563132 -8590750 - L1MC4a LINE L1 -1470 6338 5436 417 295 92 40 chr20 63563644 63564688 -8589194 - L1MC4a LINE L1 -748 5398 4330 3435 156 22 7 chr20 63564688 63565284 -8588598 - MER6A DNA MER2_type 0 605 1 417 295 92 40 chr20 63565284 63565410 -8588472 - L1MC4a LINE L1 -1816 4330 4212 614 194 0 47 chr20 63565830 63565857 -8588025 - FLAM_A SINE Alu -179 132 105 2834 115 53 9 chr20 63565857 63565899 -8587983 - MLT2A2 LTR ERVL 0 453 414 378 0 0 0 chr20 63565899 63565941 -8587941 + (TA)n Simple_repeat Simple_repeat 2 43 0 2834 115 53 9 chr20 63565941 63566332 -8587550 - MLT2A2 LTR ERVL -39 414 1 614 194 0 47 chr20 63566332 63566433 -8587449 - FLAM_A SINE Alu -206 105 10 294 261 157 9 chr20 63567364 63567479 -8586403 + MIR SINE MIR 20 151 -111 239 399 72 7 chr20 63567523 63567676 -8586206 - L2 LINE L2 -9 3263 3101 347 279 176 20 chr20 63567739 63567943 -8585939 - L2 LINE L2 0 3313 3078 6223 118 12 5 chr20 63568053 63568987 -8584895 - HSMAR2 DNA Mariner -362 940 1 505 289 156 4 chr20 63569343 63569568 -8584314 + MIR SINE MIR 3 261 -1 237 230 14 40 chr20 63569584 63569658 -8584224 + (CACCAT)n Simple_repeat Simple_repeat 2 73 0 24 0 0 0 chr20 63569726 63569750 -8584132 + AT_rich Low_complexity Low_complexity 1 24 0 432 309 58 55 chr20 63570109 63570400 -8583482 + MLT1J LTR MaLR 25 316 -195 6325 127 26 24 chr20 63570535 63571440 -8582442 + L1PB1 LINE L1 4654 5556 -595 2232 96 4 0 chr20 63571440 63571748 -8582134 - AluSp SINE Alu 0 311 3 6325 127 26 24 chr20 63571748 63571969 -8581913 + L1PB1 LINE L1 5556 5775 -376 414 39 0 0 chr20 63571969 63572021 -8581861 + (CA)n Simple_repeat Simple_repeat 2 53 0 6325 127 26 24 chr20 63572021 63572380 -8581502 + L1PB1 LINE L1 5775 6151 0 534 344 82 31 chr20 63573536 63573663 -8580219 - L2 LINE L2 -249 3064 2945 2143 122 0 30 chr20 63573663 63573967 -8579915 + AluSx SINE Alu 1 295 -17 534 344 82 31 chr20 63573967 63574293 -8579589 - L2 LINE L2 -368 2945 2562 501 307 43 0 chr20 63574336 63574499 -8579383 - MIR SINE MIR -75 187 18 1166 264 93 31 chr20 63574634 63575067 -8578815 - LTR40c LTR ERVL 0 519 18 2415 146 25 23 chr20 63575222 63575654 -8578228 - Tigger2a DNA MER2_type 0 434 2 2325 99 0 0 chr20 63575679 63575972 -8577910 + AluSg SINE Alu 1 293 -17 560 191 9 0 chr20 63576413 63576518 -8577364 - MLT1A1 LTR MaLR 0 365 260 927 239 52 5 chr20 63677191 63677404 -8476478 - MER58A DNA MER1_type -1 223 1 207 0 0 0 chr20 63677645 63677668 -8476214 + (TTTTA)n Simple_repeat Simple_repeat 3 25 0 1021 167 0 0 chr20 63677682 63677844 -8476038 - AluJo SINE Alu -49 263 102 218 344 19 39 chr20 63677847 63678001 -8475881 + MIR SINE MIR 71 221 -41 674 306 144 25 chr20 63678261 63678886 -8474996 + L2 LINE L2 2616 3312 -1 282 331 65 6 chr20 63678927 63679096 -8474786 + MIR SINE MIR 65 243 -19 430 289 32 13 chr20 63679221 63679377 -8474505 + MER103 DNA DNA 1 159 -7 2282 108 0 10 chr20 63679553 63679860 -8474022 - AluSq SINE Alu -7 306 3 2092 138 7 0 chr20 63680532 63680836 -8473046 + AluJb SINE Alu 1 306 -6 279 0 0 0 chr20 63681128 63681159 -8472723 + (T)n Simple_repeat Simple_repeat 1 31 0 833 31 0 0 chr20 63681989 63682087 -8471795 + AluY SINE Alu 212 309 -2 1942 123 42 7 chr20 63682204 63682355 -8471527 - AluSq SINE Alu -18 295 151 2653 29 0 7 chr20 63682355 63682662 -8471220 - AluY SINE Alu -6 305 1 1942 123 42 7 chr20 63682662 63682795 -8471087 - AluSq SINE Alu -162 151 1 759 239 6 0 chr20 63682965 63683128 -8470754 - MER5A DNA MER1_type 0 189 26 233 323 10 20 chr20 63683190 63683289 -8470593 - MER5A DNA MER1_type -42 147 50 488 295 6 44 chr20 63683773 63683956 -8469926 + MLT1K LTR MaLR 2 177 -411 315 287 0 11 chr20 63684016 63684110 -8469772 + L2 LINE L2 3215 3307 -6 327 252 148 52 chr20 63684110 63684320 -8469562 + MLT1K LTR MaLR 294 523 -65 2027 127 3 60 chr20 63684332 63684663 -8469219 - AluSx SINE Alu 0 312 1 384 22 0 0 chr20 63685503 63685548 -8468334 + (ATG)n Simple_repeat Simple_repeat 2 46 0 612 183 0 0 chr20 63685995 63686110 -8467772 - L1MA7 LINE L1 -3 6288 6174 3101 175 32 10 chr20 63686807 63687397 -8466485 + MER6A DNA MER2_type 3 605 0 28 61 0 0 chr20 63687428 63687477 -8466405 + AT_rich Low_complexity Low_complexity 1 49 0 512 105 0 12 chr20 63688104 63688342 -8465540 + AluSg SINE Alu 1 309 -1 229 320 13 0 chr20 63688496 63688574 -8465308 - MIR3 SINE MIR -7 201 123 237 316 90 81 chr20 63688703 63688947 -8464935 + L2 LINE L2 2933 3182 -90 2510 67 0 0 chr20 63688947 63689244 -8464638 - AluY SINE Alu -14 297 1 237 316 90 81 chr20 63689244 63689322 -8464560 + L2 LINE L2 3182 3258 -14 225 0 0 0 chr20 63689322 63689347 -8464535 + (TGAA)n Simple_repeat Simple_repeat 4 28 0 339 153 73 69 chr20 63690021 63690148 -8463734 + L1MB7 LINE L1 5780 5919 -259 450 180 34 22 chr20 63690148 63690237 -8463645 + MSTD LTR MaLR 1 90 -338 3725 158 31 43 chr20 63690263 63690965 -8462917 - LTR8A LTR ERV1 0 727 34 1052 191 22 52 chr20 63690986 63691217 -8462665 + MSTD LTR MaLR 173 396 0 408 208 26 0 chr20 63691217 63691294 -8462588 + L1MB7 LINE L1 5915 5993 -191 5137 143 59 7 chr20 63691296 63692129 -8461753 - MER4D LTR ERV1 -22 881 6 617 194 40 69 chr20 63692134 63692309 -8461573 + L1MB7 LINE L1 6006 6175 -9 2411 54 0 0 chr20 63692369 63692647 -8461235 + AluY SINE Alu 26 303 -8 586 238 85 49 chr20 63693888 63693973 -8459909 - MER5A DNA MER1_type -19 170 90 2105 101 22 0 chr20 63693973 63694290 -8459592 - AluSq SINE Alu 0 323 1 586 238 85 49 chr20 63694290 63694367 -8459515 - MER5A DNA MER1_type -99 90 1 309 296 49 14 chr20 63694414 63694556 -8459326 + MIR SINE MIR 10 156 -106 2397 91 0 0 chr20 63695085 63695393 -8458489 - AluSc SINE Alu -1 308 1 264 149 0 0 chr20 63695593 63695640 -8458242 + (TCCC)n Simple_repeat Simple_repeat 4 50 0 1296 165 13 13 chr20 63695643 63695867 -8458015 - AluJb SINE Alu -1 311 88 1330 300 92 33 chr20 63696484 63697527 -8456355 + L2 LINE L2 2188 3313 0 1836 15 0 5 chr20 63698646 63698851 -8455031 - AluY SINE Alu 0 311 108 632 286 39 0 chr20 63699246 63699424 -8454458 + MER5A DNA MER1_type 5 189 0 283 217 156 0 chr20 63699931 63700040 -8453842 + L1MC/D LINE L1 5706 5829 -297 847 198 109 25 chr20 63700045 63700247 -8453635 - MER58A DNA MER1_type -5 219 1 195 139 0 0 chr20 63700380 63700416 -8453466 + (TATG)n Simple_repeat Simple_repeat 3 38 0 246 317 77 10 chr20 63701111 63701215 -8452667 + L2 LINE L2 3203 3313 0 249 277 122 27 chr20 63701350 63701538 -8452344 - MIR SINE MIR -26 236 31 2342 107 0 0 chr20 63703206 63703514 -8450368 + AluY SINE Alu 1 308 -3 223 274 224 17 chr20 63703527 63703706 -8450176 - MIR SINE MIR -2 260 45 981 191 48 29 chr20 63703767 63703976 -8449906 - MER20 DNA MER1_type -6 213 1 583 286 0 0 chr20 63704053 63704172 -8449710 + MER45 DNA AcHobo 3 121 -57 2193 117 3 3 chr20 63704863 63705172 -8448710 - AluSc SINE Alu 0 309 1 286 250 24 36 chr20 63705210 63705294 -8448588 + MIR SINE MIR 3 85 -177 2299 99 10 0 chr20 63705383 63705675 -8448207 - AluSx SINE Alu -17 295 1 321 327 45 0 chr20 63706187 63706297 -8447585 + L2 LINE L2 3158 3272 0 271 328 60 0 chr20 63706323 63706439 -8447443 - L1MC/D LINE L1 -2108 5700 5578 2295 91 0 0 chr20 63706547 63706832 -8447050 + AluSx SINE Alu 2 286 -26 459 0 0 0 chr20 63708010 63708061 -8445821 + (TA)n Simple_repeat Simple_repeat 2 52 0 1732 188 3 0 chr20 63708062 63708349 -8445533 - AluJo SINE Alu -24 288 1 2111 138 0 3 chr20 63708442 63708753 -8445129 + AluSg SINE Alu 1 310 0 212 382 44 44 chr20 63708810 63708946 -8444936 + MIR SINE MIR 9 138 -70 264 217 113 96 chr20 63708989 63709104 -8444778 + L2 LINE L2 3154 3270 -2 1704 224 102 57 chr20 63709350 63709460 -8444422 + MLT1E LTR MaLR 8 112 -481 1515 172 57 37 chr20 63709460 63709756 -8444126 + AluJo SINE Alu 1 302 -10 1704 224 102 57 chr20 63709756 63709995 -8443887 + MLT1E LTR MaLR 112 339 -254 2484 56 0 25 chr20 63709995 63710314 -8443568 + AluY SINE Alu 1 311 0 1704 224 102 57 chr20 63710314 63710521 -8443361 + MLT1E LTR MaLR 339 590 -3 406 292 21 7 chr20 63710586 63710730 -8443152 - Charlie8 DNA MER1_type -2184 233 88 2025 186 17 85 chr20 63710991 63711174 -8442708 - MLT1D LTR MaLR 0 505 311 2295 75 32 0 chr20 63711174 63711455 -8442427 - AluSc SINE Alu -19 290 1 2025 186 17 85 chr20 63711455 63711813 -8442069 - MLT1D LTR MaLR -194 311 1 256 284 29 0 chr20 63712848 63712950 -8440932 + L1ME LINE L1 5561 5665 -456 288 200 0 0 chr20 63713004 63713089 -8440793 + (TA)n Simple_repeat Simple_repeat 2 86 0 1672 199 0 0 chr20 63713091 63713373 -8440509 - AluJo SINE Alu -30 282 1 433 96 0 24 chr20 63713809 63713892 -8439990 + (GA)n Simple_repeat Simple_repeat 2 82 0 505 379 37 0 chr20 63714039 63714282 -8439600 - MIR SINE MIR 0 262 11 1061 226 16 55 chr20 63714393 63714702 -8439180 - MLT2B1 LTR ERVL -221 299 3 1092 219 40 40 chr20 63714847 63715175 -8438707 + MER58B DNA MER1_type 12 339 -2 1754 172 3 14 chr20 63715509 63715806 -8438076 - AluJb SINE Alu -18 294 1 441 288 123 43 chr20 63715935 63716237 -8437645 + MER102b DNA MER1_type 2 327 -14 354 273 0 23 chr20 63717462 63717594 -8436288 + (TATATG)n Simple_repeat Simple_repeat 3 131 0 30 0 0 0 chr20 63717607 63717637 -8436245 + AT_rich Low_complexity Low_complexity 1 30 0 2077 114 0 32 chr20 63718114 63718430 -8435452 + AluSx SINE Alu 5 310 -2 2190 87 7 0 chr20 63719155 63719480 -8434402 - AluSg SINE Alu 0 327 1 306 0 0 0 chr20 63719647 63719681 -8434201 + (CA)n Simple_repeat Simple_repeat 2 35 0 288 203 0 0 chr20 63720011 63720075 -8433807 - Charlie8 DNA MER1_type -2262 155 92 286 301 102 42 chr20 63721047 63721213 -8432669 + MIR SINE MIR 35 210 -52 416 320 0 8 chr20 63721248 63721373 -8432509 + L2 LINE L2 3186 3309 -4 183 42 0 0 chr20 63721924 63721948 -8431934 + (TC)n Simple_repeat Simple_repeat 2 25 0 * 228 35 0 0 chr20 63721947 63721976 -8431906 + (TG)n Simple_repeat Simple_repeat 2 30 0 279 79 0 0 chr20 63722022 63722060 -8431822 + (TG)n Simple_repeat Simple_repeat 2 39 0 2231 92 0 14 chr20 63722071 63722366 -8431516 - AluSg1 SINE Alu -18 291 1 22 35 0 0 chr20 63722753 63722782 -8431100 + AT_rich Low_complexity Low_complexity 1 29 0 2607 39 0 3 chr20 63722838 63723144 -8430738 + AluY SINE Alu 1 305 -6 678 191 76 0 chr20 63723360 63723517 -8430365 - MER20 DNA MER1_type -15 204 36 697 251 51 35 chr20 63723991 63724116 -8429766 + MER113 DNA MER1_type? 95 217 -304 2141 109 3 0 chr20 63724116 63724399 -8429483 + AluSg1 SINE Alu 3 286 -23 697 251 51 35 chr20 63724399 63724648 -8429234 + MER113 DNA MER1_type? 217 475 -46 256 326 92 27 chr20 63724712 63724923 -8428959 + MIR SINE MIR 33 262 0 477 281 146 18 chr20 63725876 63726150 -8427732 + L2 LINE L2 2335 2643 -671 735 257 39 31 chr20 63726440 63726697 -8427185 + MER77 LTR ERV1 339 597 -8 763 299 131 12 chr20 63726766 63727291 -8426591 + L2 LINE L2 2728 3313 0 195 171 0 0 chr20 63727477 63727512 -8426370 - L3 LINE CR1 -1 1576 1542 209 327 65 47 chr20 63727515 63727622 -8426260 + L2 LINE L2 3199 3307 -6 272 286 140 23 chr20 63729464 63729635 -8424247 + MIR SINE MIR 72 262 0 957 168 117 10 chr20 63729662 63729859 -8424023 - MER20 DNA MER1_type -1 218 1 591 281 33 28 chr20 63730353 63730589 -8423293 - MIR SINE MIR -24 238 1 255 309 186 16 chr20 63731095 63731289 -8422593 - MIR SINE MIR -35 227 1 2416 62 3 0 chr20 63731735 63732025 -8421857 - AluY SINE Alu -20 291 1 232 186 17 17 chr20 63732052 63732111 -8421771 + (CA)n Simple_repeat Simple_repeat 1 59 0 26 30 0 0 chr20 63732394 63732427 -8421455 + AT_rich Low_complexity Low_complexity 1 33 0 1087 170 6 6 chr20 63732665 63732847 -8421035 - AluJ SINE Alu -2 310 129 3426 96 10 4 chr20 63732923 63733414 -8420468 - L1PA12 LINE L1 -7 6161 5668 710 164 8 0 chr20 63733417 63733539 -8420343 - AluJ SINE Alu -189 123 1 1057 99 7 0 chr20 63733811 63733953 -8419929 - AluY SINE Alu -13 298 156 2291 55 31 7 chr20 63734253 63734543 -8419339 + AluY SINE Alu 1 297 -14 26 0 0 0 chr20 63736697 63736723 -8417159 + AT_rich Low_complexity Low_complexity 1 26 0 285 116 0 0 chr20 63736853 63736896 -8416986 - MIR SINE MIR -111 151 109 243 258 32 0 chr20 63737129 63737191 -8416691 + MIR SINE MIR 76 139 -123 348 259 34 54 chr20 63737892 63738039 -8415843 + MIR SINE MIR 94 237 -25 670 333 115 59 chr20 63739964 63740626 -8413256 + L2 LINE L2 2570 3271 -1 477 300 104 27 chr20 63740915 63740960 -8412922 - MIR SINE MIR -8 254 214 2064 95 53 7 chr20 63740960 63741245 -8412637 - AluSx SINE Alu -14 298 1 477 300 104 27 chr20 63741245 63741419 -8412463 - MIR SINE MIR -48 214 18 259 25 50 0 chr20 63741904 63741944 -8411938 + (CA)n Simple_repeat Simple_repeat 1 42 0 408 228 0 0 chr20 63742173 63742281 -8411601 + L1MEc LINE L1 1706 1880 -4502 216 0 0 0 chr20 63742286 63742310 -8411572 + (TG)n Simple_repeat Simple_repeat 2 25 0 299 189 23 30 chr20 63742310 63742442 -8411440 + (TA)n Simple_repeat Simple_repeat 2 132 0 10408 206 39 45 chr20 63742552 63742913 -8410969 + L1MB1 LINE L1 2003 2365 -4039 1531 172 93 34 chr20 63742913 63743204 -8410678 - AluSx SINE Alu -2 310 3 10408 206 39 45 chr20 63743204 63746864 -8407018 + L1MB1 LINE L1 2365 6018 -386 404 62 0 0 chr20 63746862 63746926 -8406956 - L1P LINE L1 -808 5346 5283 * 2729 74 5 5 chr20 63746927 63747305 -8406577 + L1PA7 LINE L1 5777 6154 0 1929 184 18 15 chr20 63747305 63747690 -8406192 + L1MB1 LINE L1 6005 6396 -8 207 69 0 0 chr20 63747709 63747738 -8406144 + (CA)n Simple_repeat Simple_repeat 2 30 0 486 217 45 45 chr20 63747744 63747965 -8405917 - MER113 DNA MER1_type? -257 264 44 231 139 0 0 chr20 63749179 63749215 -8404667 + MLT1I LTR MaLR 98 133 -276 182 379 91 0 chr20 63749852 63749984 -8403898 - MIR SINE MIR -84 178 35 486 278 99 33 chr20 63750443 63750789 -8403093 - L1ME3 LINE L1 -22 6140 5767 305 272 30 41 chr20 63750799 63750968 -8402914 - L1M4 LINE L1 -3856 2290 2124 2101 112 0 0 chr20 63751364 63751641 -8402241 + AluSx SINE Alu 21 297 -15 315 336 79 0 chr20 63751918 63752316 -8401566 - L1MC5 LINE L1 -519 7495 7185 2316 102 0 7 chr20 63753375 63753679 -8400203 - AluSc SINE Alu -7 302 1 705 327 55 19 chr20 63753734 63754156 -8399726 + L2 LINE L2 2868 3304 -9 201 325 33 50 chr20 63754168 63754288 -8399594 - MIR SINE MIR -97 165 48 332 324 65 54 chr20 63754508 63754623 -8399259 - MIR SINE MIR -28 234 115 2505 57 0 7 chr20 63754623 63754923 -8398959 + AluY SINE Alu 1 298 -13 332 324 65 54 chr20 63754923 63754992 -8398890 - MIR SINE MIR -147 115 48 237 344 101 25 chr20 63755087 63755405 -8398477 - L2 LINE L2 -255 3017 2689 829 163 112 51 chr20 63755412 63755608 -8398274 + MER20 DNA MER1_type 1 208 -11 206 394 48 0 chr20 63755642 63755746 -8398136 - MER91C DNA MER1_type -30 110 2 383 334 52 21 chr20 63757414 63757754 -8396128 + L1MC4a LINE L1 5517 5791 -330 236 271 51 25 chr20 63757781 63757899 -8395983 + MER94 DNA DNA 5 125 -9 198 0 0 0 chr20 63758079 63758101 -8395781 + (T)n Simple_repeat Simple_repeat 1 22 0 208 0 0 0 chr20 63758129 63758152 -8395730 + (TTTA)n Simple_repeat Simple_repeat 2 96 0 2328 60 0 7 chr20 63758152 63758436 -8395446 - AluY SINE Alu -29 282 1 2835 214 74 34 chr20 63759160 63760194 -8393688 + L1MD2 LINE L1 4404 5396 -963 1673 173 0 18 chr20 63760194 63760478 -8393404 + AluJo SINE Alu 27 305 -7 2835 214 74 34 chr20 63760478 63761052 -8392830 + L1MD2 LINE L1 5396 6069 -290 2207 79 20 10 chr20 63761052 63761344 -8392538 - AluSc SINE Alu -14 295 1 2835 214 74 34 chr20 63761344 63761386 -8392496 + L1MD2 LINE L1 6069 6108 -251 709 136 0 0 chr20 63761499 63761602 -8392280 - AluJb SINE Alu -209 103 1 1957 127 12 3 chr20 63761654 63761976 -8391906 + MER44D DNA MER2_type 13 607 -2 277 296 186 30 chr20 63762005 63762272 -8391610 - L2 LINE L2 -250 3063 2749 2211 78 7 27 chr20 63762648 63762943 -8390939 - AluY SINE Alu -22 289 1 198 0 0 0 chr20 63763398 63763420 -8390462 + (A)n Simple_repeat Simple_repeat 1 22 0 1604 206 78 2 chr20 63763820 63764242 -8389640 - MLT1C LTR MaLR -13 454 1 1865 167 3 0 chr20 63764367 63764672 -8389210 + AluJo SINE Alu 1 306 -6 199 398 65 0 chr20 63764886 63764979 -8388903 - L2 LINE L2 -27 3245 3147 2308 80 3 7 chr20 63765128 63765429 -8388453 + AluSp SINE Alu 1 300 -13 451 236 85 102 chr20 63765429 63765675 -8388207 - MLT1J LTR MaLR -55 456 215 189 361 66 6 chr20 63765871 63766037 -8387845 - L2 LINE L2 -175 3097 2922 * 280 291 28 84 chr20 63766028 63766163 -8387719 - L2 LINE L2 -806 2508 2384 2313 106 0 3 chr20 63766163 63766466 -8387416 + AluSq SINE Alu 1 302 -11 280 291 28 84 chr20 63766466 63766509 -8387373 - L2 LINE L2 -930 2384 2340 331 238 66 13 chr20 63767381 63767532 -8386350 + MER103 DNA DNA 1 159 -7 236 265 120 5 chr20 63767714 63767806 -8386076 - MIR SINE MIR -92 116 15 781 289 204 27 chr20 63769142 63769553 -8384329 - L2 LINE L2 -90 3223 2886 1650 138 107 47 chr20 63769553 63769871 -8384011 + MER1B DNA MER1_type 1 337 0 781 289 204 27 chr20 63769871 63770088 -8383794 - L2 LINE L2 -427 2886 2484 207 284 245 0 chr20 63771684 63771786 -8382096 - L2 LINE L2 -7 3265 3139 2291 93 0 7 chr20 63773168 63773469 -8380413 - AluSg SINE Alu -10 300 2 2456 53 0 0 chr20 63773590 63773891 -8379991 + AluY SINE Alu 1 301 -10 300 305 61 43 chr20 63774293 63774457 -8379425 + L1ME LINE L1 5629 5795 -367 21 36 0 0 chr20 63774605 63774633 -8379249 + AT_rich Low_complexity Low_complexity 1 28 0 1919 166 13 0 chr20 63774957 63775259 -8378623 + AluSx SINE Alu 1 306 -6 4303 202 19 38 chr20 63775388 63776790 -8377092 + L1MD1 LINE L1 4862 6236 -6 566 250 90 5 chr20 63777327 63777539 -8376343 - Tigger8 DNA MER2_type -118 548 319 388 290 124 14 chr20 63777761 63777906 -8375976 + MER5A DNA MER1_type 1 161 -28 252 268 93 11 chr20 63778363 63778546 -8375336 + MER113 DNA MER1_type? 5 202 -319 1557 170 19 22 chr20 63778548 63778819 -8375063 + AluJb SINE Alu 1 270 -42 306 0 0 0 chr20 63778821 63778855 -8375027 + (TAAA)n Simple_repeat Simple_repeat 3 36 0 1109 162 69 15 chr20 63778944 63779148 -8374734 - MER20 DNA MER1_type -4 215 1 1156 216 9 0 chr20 63779780 63780002 -8373880 - MER58A DNA MER1_type 0 224 1 1765 47 0 0 chr20 63780470 63780685 -8373197 + L1PA5 LINE L1 5939 6153 -1 612 298 32 28 chr20 63780798 63781046 -8372836 - MIR SINE MIR -2 260 12 185 214 0 89 chr20 63781852 63781877 -8372005 + MIR3 SINE MIR 123 142 -66 3423 163 68 38 chr20 63781877 63782583 -8371299 + LTR8A LTR ERV1 1 727 0 185 214 0 89 chr20 63782583 63782613 -8371269 + MIR3 SINE MIR 142 173 -35 299 281 239 22 chr20 63783039 63783310 -8370572 + L1ME LINE L1 5532 5859 -262 285 303 17 126 chr20 63783475 63783499 -8370383 + L2 LINE L2 2468 2493 -821 375 23 0 0 chr20 63783499 63783543 -8370339 + (CA)n Simple_repeat Simple_repeat 1 44 0 1534 194 33 40 chr20 63783550 63783977 -8369905 + LTR37A LTR ERV1 3 426 0 285 303 17 126 chr20 63783977 63784294 -8369588 + L2 LINE L2 2499 2779 -535 1088 306 97 31 chr20 63784798 63784942 -8368940 - L2 LINE L2 -1 3312 3179 366 23 0 0 chr20 63784942 63784985 -8368897 + (TG)n Simple_repeat Simple_repeat 2 44 0 1088 306 97 31 chr20 63784985 63785348 -8368534 - L2 LINE L2 -134 3179 2841 2262 114 0 3 chr20 63785348 63785656 -8368226 + AluSx SINE Alu 1 307 -5 1088 306 97 31 chr20 63785656 63786094 -8367788 - L2 LINE L2 -472 2841 2311 349 193 50 109 chr20 63786194 63786261 -8367621 + MIR SINE MIR 146 205 -57 1593 174 16 30 chr20 63786261 63786565 -8367317 + AluJb SINE Alu 1 300 -12 349 193 50 109 chr20 63786565 63786616 -8367266 + MIR SINE MIR 205 257 -5 330 282 92 8 chr20 63786687 63786818 -8367064 - L2 LINE L2 0 3313 3172 195 341 44 0 chr20 63786996 63787087 -8366795 + L2 LINE L2 2773 2867 -447 361 271 66 42 chr20 63787207 63787373 -8366509 - MLT1H LTR MaLR -2 547 378 2194 167 113 27 chr20 63787508 63787776 -8366106 - L1MD1 LINE L1 0 6242 5998 2059 104 36 29 chr20 63787776 63788084 -8365798 - AluSg SINE Alu 0 310 1 2194 167 113 27 chr20 63788084 63788366 -8365516 - L1MD1 LINE L1 -244 5998 5645 1933 170 47 0 chr20 63788363 63788764 -8365118 - L1MDa LINE L1 -4271 2269 1850 * 4276 218 161 20 chr20 63788776 63788817 -8365065 - L1MDa LINE L1 -4932 1608 1574 700 177 106 81 chr20 63788817 63788948 -8364934 - MER6B DNA MER2_type -658 207 68 2395 107 0 0 chr20 63788948 63789256 -8364626 + AluSg SINE Alu 1 308 -2 700 177 106 81 chr20 63789256 63789322 -8364560 - MER6B DNA MER2_type -797 68 5 4276 218 161 20 chr20 63789322 63790675 -8363207 - L1MDa LINE L1 -4966 1574 17 2126 94 11 0 chr20 63791954 63792265 -8361617 + AluSg1 SINE Alu 1 314 0 379 359 28 0 chr20 63792419 63792600 -8361282 - MIR SINE MIR -24 238 53 1852 150 3 7 chr20 63792605 63792898 -8360984 + AluJb SINE Alu 9 300 -12 24925 43 42 2 chr20 63793132 63796427 -8357455 - L1P LINE L1 -2721 3425 1 568 276 53 4 chr20 63796580 63796845 -8357037 + L1ME LINE L1 4356 4633 -1513 431 305 53 5 chr20 63796980 63797167 -8356715 - L1M4 LINE L1 -1071 5075 4880 639 200 45 30 chr20 63797199 63797423 -8356459 + L1ME LINE L1 5238 5465 -697 1153 128 5 0 chr20 63797837 63798025 -8355857 + L1MA2 LINE L1 6116 6304 0 298 254 8 92 chr20 63799068 63799198 -8354684 - MIR SINE MIR -47 215 97 393 242 32 73 chr20 63799622 63799746 -8354136 - MIR SINE MIR -140 122 4 296 259 62 0 chr20 63800046 63800127 -8353755 + MLT1E3 LTR MaLR 139 224 -400 1745 166 41 3 chr20 63800167 63800505 -8353377 + MER34B LTR ERV1 186 536 -29 355 227 52 0 chr20 63800523 63800620 -8353262 + MLT1E3 LTR MaLR 523 624 0 1182 240 67 17 chr20 63801081 63801427 -8352455 + MLT1A2 LTR MaLR 1 363 -11 890 117 0 7 chr20 63801450 63801587 -8352295 + L1PA13 LINE L1 6017 6152 -11 255 246 0 33 chr20 63801601 63801662 -8352220 + ORSL DNA AcHobo 217 275 0 920 249 42 26 chr20 63802165 63802551 -8351331 - L1M4 LINE L1 -1374 4772 4381 256 243 68 0 chr20 63802718 63802792 -8351090 + MLT1K LTR MaLR 506 584 -4 323 276 161 42 chr20 63803600 63803792 -8350090 - MIR SINE MIR -12 250 36 272 316 0 0 chr20 63803880 63803959 -8349923 + (CA)n Simple_repeat Simple_repeat 2 80 0 675 292 108 47 chr20 63803961 63804413 -8349469 + MLT1L LTR MaLR 46 525 -90 2223 123 0 0 chr20 63804680 63804980 -8348902 - AluSx SINE Alu -12 300 1 1003 316 77 0 chr20 63804982 63805346 -8348536 + MLT1E LTR MaLR 151 542 -51 1902 167 0 0 chr20 63805380 63805662 -8348220 - AluSx SINE Alu -30 282 1 454 157 0 0 chr20 63805701 63805771 -8348111 - AluS SINE Alu -219 94 25 358 322 88 24 chr20 63806345 63806550 -8347332 + MIR SINE MIR 32 249 -13 335 300 174 16 chr20 63806579 63806769 -8347113 - MIR SINE MIR -28 234 15 484 259 30 90 chr20 63807987 63808162 -8345720 + MLT1K LTR MaLR 207 332 -256 2365 64 0 0 chr20 63808162 63808445 -8345437 + AluY SINE Alu 1 306 0 208 0 0 0 chr20 63808445 63808468 -8345414 + (CAAA)n Simple_repeat Simple_repeat 2 92 0 484 259 30 90 chr20 63808468 63808696 -8345186 + MLT1K LTR MaLR 332 572 -16 25 31 0 0 chr20 63808755 63808787 -8345095 + AT_rich Low_complexity Low_complexity 1 32 0 612 304 32 9 chr20 63808893 63809110 -8344772 + MIR SINE MIR 6 227 -35 228 111 0 0 chr20 63809482 63809518 -8344364 + (TG)n Simple_repeat Simple_repeat 2 37 0 180 0 0 0 chr20 63809622 63809642 -8344240 + (A)n Simple_repeat Simple_repeat 1 20 0 920 154 77 5 chr20 63809643 63809838 -8344044 + L1PA13 LINE L1 5952 6160 -3 2277 116 22 22 chr20 63810457 63810820 -8343062 - THE1B LTR MaLR -1 363 1 840 149 6 17 chr20 63812029 63812210 -8341672 + GA-rich Low_complexity Low_complexity 1 179 0 230 378 8 8 chr20 63812787 63812906 -8340976 + L2 LINE L2 3187 3305 -8 282 255 61 31 chr20 63812959 63813057 -8340825 + L1ME LINE L1 5500 5600 -521 387 366 54 9 chr20 63813123 63813344 -8340538 - MIR SINE MIR -31 231 1 44 94 0 0 chr20 63814223 63814351 -8339531 + AT_rich Low_complexity Low_complexity 1 128 0 391 266 18 18 chr20 63814359 63814468 -8339414 + L2 LINE L2 3201 3309 -4 345 366 23 8 chr20 63814637 63814768 -8339114 + L2 LINE L2 2650 2782 -532 2265 238 21 21 chr20 63814795 63815325 -8338557 - LTR31 LTR ERV1 -15 604 75 1861 215 120 66 chr20 63815637 63815743 -8338139 + L1MC4 LINE L1 7259 7358 -684 2205 95 3 0 chr20 63815743 63816073 -8337809 - AluSq SINE Alu 0 331 1 1861 215 120 66 chr20 63816073 63816681 -8337201 + L1MC4 LINE L1 7358 8013 -29 2322 103 0 3 chr20 63816710 63817020 -8336862 - AluSc SINE Alu 0 309 1 4023 194 70 39 chr20 63817274 63817896 -8335986 - L1MD1 LINE L1 0 6242 5641 1786 179 10 0 chr20 63817896 63818193 -8335689 - AluJo SINE Alu -12 300 1 196 30 61 0 chr20 63818197 63818230 -8335652 + T-rich Low_complexity Low_complexity 7 41 0 4023 194 70 39 chr20 63818230 63818955 -8334927 - L1MD1 LINE L1 -603 5639 4849 2796 231 110 38 chr20 63818986 63821294 -8332588 + L1MCb LINE L1 8 2580 -3984 943 180 67 15 chr20 63821287 63821641 -8332241 - L1MC/D LINE L1 -743 5797 5516 * 23890 46 6 1 chr20 63821653 63825451 -8328431 - L1PA5 LINE L1 -4 6150 2342 5973 68 1 0 chr20 63825451 63826240 -8327642 + L1PA5 LINE L1 1528 2317 -3829 775 251 12 25 chr20 63826240 63826483 -8327399 - L1MC/D LINE L1 -1031 5509 5270 774 251 36 5 chr20 63826485 63826680 -8327202 - L1MC/D LINE L1 -6333 207 7 245 128 0 0 chr20 63826666 63826705 -8327177 + L1MC4 LINE L1 8002 8040 -2 * 1063 196 159 96 chr20 63826851 63826924 -8326958 - MLT1C LTR MaLR 0 467 400 2023 145 0 3 chr20 63826924 63827220 -8326662 - AluSx SINE Alu -17 295 1 1063 196 159 96 chr20 63827220 63827585 -8326297 - MLT1C LTR MaLR -67 400 1 1778 135 14 21 chr20 63827745 63827947 -8325935 - MER72 LTR ERV1 0 722 521 2080 129 137 8 chr20 63827947 63828326 -8325556 + MSTA LTR MaLR 1 428 0 1778 135 14 21 chr20 63828326 63828412 -8325470 - MER72 LTR ERV1 -201 521 436 * 2014 163 6 6 chr20 63828411 63828743 -8325139 - MER72 LTR ERV1 -390 332 1 657 206 0 8 chr20 63828788 63828914 -8324968 - Tigger5 DNA MER2_type 0 2323 2199 1418 188 193 12 chr20 63828917 63829322 -8324560 + LTR48 LTR ERV1 4 481 -306 1080 230 27 19 chr20 63829322 63829579 -8324303 + LTR48B LTR ERV1 386 644 0 917 86 0 36 chr20 63829583 63829639 -8324243 - Tigger5 DNA MER2_type -125 2198 2142 1943 155 10 102 chr20 63829639 63830129 -8323753 + MER65A LTR ERV1 1 445 0 917 86 0 36 chr20 63830129 63830212 -8323670 - Tigger5 DNA MER2_type -181 2142 2064 1173 270 84 41 chr20 63830389 63830464 -8323418 + L1ME3 LINE L1 5564 5634 -528 2405 188 5 2 chr20 63830464 63830889 -8322993 + MSTB LTR MaLR 1 426 0 1173 270 84 41 chr20 63830889 63831372 -8322510 + L1ME3 LINE L1 5634 6146 -16 1646 185 73 126 chr20 63831372 63832126 -8321756 + LTR8A LTR ERV1 1 727 0 22 0 0 0 chr20 63832376 63832398 -8321484 + AT_rich Low_complexity Low_complexity 1 22 0 3741 194 49 20 chr20 63832425 63833401 -8320481 - L1MB7 LINE L1 -9 6175 5159 611 258 148 44 chr20 63834866 63835095 -8318787 - MIR SINE MIR -7 255 3 28 29 0 0 chr20 63835198 63835233 -8318649 + AT_rich Low_complexity Low_complexity 1 35 0 443 47 0 0 chr20 63835243 63835307 -8318575 - L1MA7 LINE L1 -6 6285 6222 221 207 35 0 chr20 63835566 63835624 -8318258 + (CATATA)n Simple_repeat Simple_repeat 3 62 0 207 263 163 38 chr20 63835772 63835852 -8318030 - L2 LINE L2 0 3272 3183 331 290 43 10 chr20 63835950 63836095 -8317787 - MIR SINE MIR -38 224 36 325 341 41 18 chr20 63836616 63836836 -8317046 + MLT1J LTR MaLR 237 461 -50 1540 171 37 57 chr20 63836964 63837263 -8316619 - AluJo SINE Alu -19 293 1 2111 25 0 0 chr20 63838463 63838701 -8315181 + AluYb8 SINE Alu 81 318 0 28 0 0 0 chr20 63838771 63838799 -8315083 + AT_rich Low_complexity Low_complexity 1 28 0 199 333 38 29 chr20 63838937 63839042 -8314840 - L2 LINE L2 0 3313 3208 380 219 169 28 chr20 63839504 63839635 -8314247 + MER113 DNA MER1_type? 173 337 -184 611 196 46 7 chr20 63839635 63839788 -8314094 + L1MA5 LINE L1 6136 6294 -6 380 219 169 28 chr20 63839788 63839834 -8314048 + MER113 DNA MER1_type? 337 375 -146 190 116 47 0 chr20 63840185 63840228 -8313654 + (CATATA)n Simple_repeat Simple_repeat 2 46 0 5488 99 29 1 chr20 63840455 63841843 -8312039 - L1PA13 LINE L1 -4 6159 4705 25 31 0 0 chr20 63841950 63841982 -8311900 + AT_rich Low_complexity Low_complexity 1 32 0 681 316 32 4 chr20 63842926 63843173 -8310709 - MIR SINE MIR -1 261 8 736 328 64 58 chr20 63843831 63844161 -8309721 + MLT1K LTR MaLR 69 405 -183 249 33 0 0 chr20 63844161 63844191 -8309691 + (CA)n Simple_repeat Simple_repeat 2 31 0 736 328 64 58 chr20 63844191 63844375 -8309507 + MLT1K LTR MaLR 405 586 -2 226 386 85 20 chr20 63845284 63845643 -8308239 + L2 LINE L2 2642 3022 -250 23 33 0 0 chr20 63845733 63845763 -8308119 + AT_rich Low_complexity Low_complexity 1 30 0 1767 184 23 25 chr20 63845972 63846326 -8307556 - MLT1A1 LTR MaLR 0 365 13 225 178 0 0 chr20 63846584 63846629 -8307253 + (CATA)n Simple_repeat Simple_repeat 3 47 0 258 284 0 0 chr20 63846639 63846706 -8307176 - MER112 DNA MER1_type -176 84 18 2178 97 7 13 chr20 63846832 63847130 -8306752 - AluSq SINE Alu -17 296 1 186 395 18 18 chr20 63847200 63847225 -8306657 + MIR SINE MIR 32 56 -152 2165 106 0 29 chr20 63847225 63847537 -8306345 + AluSg1 SINE Alu 1 303 -6 186 395 18 18 chr20 63847537 63847625 -8306257 + MIR SINE MIR 55 145 -63 465 295 0 9 chr20 63847664 63847776 -8306106 + L2 LINE L2 3192 3302 -11 207 258 15 15 chr20 63848141 63848207 -8305675 + (TA)n Simple_repeat Simple_repeat 1 66 0 471 287 97 28 chr20 63848614 63848830 -8305052 + MIR SINE MIR 32 262 0 381 349 0 0 chr20 63849140 63849266 -8304616 + MIR SINE MIR 31 156 -106 571 309 99 24 chr20 63849278 63849611 -8304271 - LTR16C LTR ERVL -13 478 121 251 241 0 0 chr20 63849792 63849846 -8304036 + L2 LINE L2 3257 3310 -3 651 175 71 84 chr20 63849983 63850137 -8303745 + FRAM SINE Alu 1 152 -14 234 0 0 0 chr20 63850140 63850166 -8303716 + (TAAA)n Simple_repeat Simple_repeat 1 26 0 325 231 0 66 chr20 63850276 63850367 -8303515 - L2 LINE L2 -4 3268 3184 2474 77 0 3 chr20 63850386 63850696 -8303186 - AluY SINE Alu -2 309 1 462 316 114 22 chr20 63852355 63852583 -8301299 - MIR SINE MIR -6 256 8 2028 117 37 29 chr20 63853060 63853436 -8300446 - L1MA8 LINE L1 -3 6288 5910 805 87 0 0 chr20 63853436 63853551 -8300331 - L1PA8 LINE L1 -1082 5064 4950 6744 65 6 24 chr20 63853551 63854681 -8299201 + L1PA8 LINE L1 5057 6170 -2 2232 133 30 0 chr20 63854693 63855060 -8298822 - L1MA8 LINE L1 -369 5922 5545 207 0 0 0 chr20 63855294 63855317 -8298565 + (CA)n Simple_repeat Simple_repeat 2 24 0 413 341 48 16 chr20 63855978 63856227 -8297655 + MIR SINE MIR 2 258 -4 2167 113 0 3 chr20 63856305 63856605 -8297277 - AluY SINE Alu -12 299 1 484 196 33 0 chr20 63857663 63857755 -8296127 + FRAM SINE Alu 67 161 -15 237 281 0 24 chr20 63857768 63857850 -8296032 + L1ME4a LINE L1 5936 6015 -106 262 307 36 36 chr20 63858306 63858541 -8295341 + L1ME LINE L1 5619 5860 -306 433 212 27 49 chr20 63858893 63859077 -8294805 + (TA)n Simple_repeat Simple_repeat 1 180 0 23 0 0 0 chr20 63859389 63859412 -8294470 + AT_rich Low_complexity Low_complexity 1 23 0 382 358 13 0 chr20 63859533 63859684 -8294198 - MIR SINE MIR 0 262 110 778 86 0 0 chr20 63859694 63859799 -8294083 + AluY SINE Alu 204 308 -3 228 175 0 0 chr20 63859880 63859943 -8293939 + T-rich Low_complexity Low_complexity 1 63 0 2227 28 0 0 chr20 63859950 63860197 -8293685 - L1PA2 LINE L1 0 6155 5909 1279 7 0 0 chr20 63860197 63860340 -8293542 + L1P2 LINE L1 5674 5816 -339 2430 113 51 25 chr20 63861384 63861739 -8292143 + THE1B LTR MaLR 1 364 0 255 220 34 0 chr20 63861750 63861809 -8292073 + MIR SINE MIR 86 146 -116 223 100 0 40 chr20 63863352 63863402 -8290480 + (GA)n Simple_repeat Simple_repeat 1 48 0 1821 207 100 31 chr20 63863413 63863834 -8290048 - MLT2B1 LTR ERVL -68 452 3 378 263 108 62 chr20 63863966 63864160 -8289722 + MIR SINE MIR 9 211 -51 292 292 75 34 chr20 63864182 63864446 -8289436 + L1ME LINE L1 5506 5626 -495 24 53 0 0 chr20 63864507 63864545 -8289337 + AT_rich Low_complexity Low_complexity 1 38 0 27 29 0 0 chr20 63864720 63864754 -8289128 + AT_rich Low_complexity Low_complexity 1 34 0 2253 153 7 50 chr20 63865658 63866062 -8287820 - MLT1B LTR MaLR 0 390 4 416 222 198 36 chr20 63866419 63866586 -8287296 + MLT1K LTR MaLR 392 585 -3 825 180 0 0 chr20 63866833 63866955 -8286927 - FLAM_A SINE Alu -11 122 1 22 35 0 0 chr20 63868971 63869000 -8284882 + AT_rich Low_complexity Low_complexity 1 29 0 1692 202 69 16 chr20 63870047 63870423 -8283459 + MSTD LTR MaLR 1 396 0 223 343 14 0 chr20 63870829 63870902 -8282980 - L3 LINE CR1 -1295 282 209 1256 239 30 27 chr20 63871104 63871434 -8282448 + MER58B DNA MER1_type 11 341 0 873 122 15 0 chr20 63872627 63872758 -8281124 - AluSg/x SINE Alu -5 305 173 2299 73 0 14 chr20 63873080 63873401 -8280481 + AluY SINE Alu 1 317 0 2301 113 0 0 chr20 63873875 63874272 -8279610 + AluSx SINE Alu 1 397 0 231 36 0 0 chr20 63875157 63875185 -8278697 + (A)n Simple_repeat Simple_repeat 1 28 0 237 163 0 0 chr20 63875420 63875469 -8278413 + GA-rich Low_complexity Low_complexity 2 50 0 362 248 38 60 chr20 63875739 63875872 -8278010 + L1ME LINE L1 6 135 -5935 2292 95 0 0 chr20 63876352 63876647 -8277235 + AluSg SINE Alu 1 295 -15 2233 116 7 0 chr20 63877155 63877457 -8276425 - AluSq SINE Alu -9 304 1 233 209 15 30 chr20 63877657 63877724 -8276158 + (CATATA)n Simple_repeat Simple_repeat 2 67 0 1380 289 109 23 chr20 63879133 63879665 -8274217 - MLT1G1 LTR MaLR -17 578 1 255 331 117 31 chr20 63879665 63879822 -8274060 + MLT1K LTR MaLR 174 344 -244 420 261 185 6 chr20 63879850 63880007 -8273875 + MLT1K LTR MaLR 402 586 -2 243 390 48 0 chr20 63880367 63880472 -8273410 + L2 LINE L2 3132 3241 -31 2208 114 0 10 chr20 63880839 63881136 -8272746 + AluSp SINE Alu 1 294 -19 494 314 93 35 chr20 63881205 63881517 -8272365 + MER102b DNA MER1_type 1 330 -11 433 325 73 15 chr20 63881555 63881761 -8272121 + MIR SINE MIR 14 231 -31 2085 154 36 33 chr20 63881763 63882126 -8271756 - THE1B LTR MaLR 0 364 1 1973 112 35 14 chr20 63882136 63882423 -8271459 - AluSx SINE Alu -17 295 3 1544 195 43 45 chr20 63882476 63882850 -8271032 - MLT1B LTR MaLR -15 375 3 233 324 20 34 chr20 63883452 63883600 -8270282 - MIR SINE MIR -109 153 8 1510 187 169 49 chr20 63884121 63884243 -8269639 + MLT1D LTR MaLR 1 107 -398 2476 109 19 25 chr20 63884243 63884609 -8269273 + THE1B LTR MaLR 1 364 0 1510 187 169 49 chr20 63884609 63884935 -8268947 + MLT1D LTR MaLR 107 503 -2 327 65 0 0 chr20 63887106 63887152 -8266730 + (CA)n Simple_repeat Simple_repeat 2 47 0 244 286 86 0 chr20 63887176 63887246 -8266636 - MIR SINE MIR -30 232 157 2042 139 0 19 chr20 63887713 63888022 -8265860 + AluSq SINE Alu 1 303 -10 246 95 0 0 chr20 63888094 63888136 -8265746 + (TA)n Simple_repeat Simple_repeat 2 43 0 600 250 8 0 chr20 63888541 63888673 -8265209 + L1MB1 LINE L1 6045 6177 -12 25 0 0 0 chr20 63888710 63888735 -8265147 + AT_rich Low_complexity Low_complexity 1 25 0 618 269 7 0 chr20 63888752 63888901 -8264981 + L1MA10 LINE L1 6180 6329 -5 1906 150 0 24 chr20 63889062 63889356 -8264526 + AluSx SINE Alu 1 287 -25 1710 181 24 0 chr20 63889391 63889678 -8264204 + AluJb SINE Alu 1 294 -18 636 250 104 5 chr20 63889768 63889980 -8263902 - MIR SINE MIR -29 233 1 453 202 112 79 chr20 63890226 63890404 -8263478 + MLT1E LTR MaLR 2 185 -408 2153 111 0 4 chr20 63890757 63891037 -8262845 + AluSq SINE Alu 11 289 -24 1050 168 0 0 chr20 63891049 63891210 -8262672 + FRAM SINE Alu 1 153 -23 349 296 16 32 chr20 63891237 63891362 -8262520 + MIR SINE MIR 18 140 -122 200 273 45 15 chr20 63891403 63891469 -8262413 - L2 LINE L2 -44 3228 3161 351 235 24 12 chr20 63891479 63891564 -8262318 + MIR SINE MIR 150 235 -27 245 215 15 0 chr20 63891567 63891632 -8262250 + (TTA)n Simple_repeat Simple_repeat 2 67 0 2409 138 56 19 chr20 63891871 63892284 -8261598 - MSTC LTR MaLR 0 428 1 1003 234 38 81 chr20 63892821 63893193 -8260689 + L1MB8 LINE L1 5817 6172 -6 264 122 0 0 chr20 63894237 63894278 -8259604 + (CA)n Simple_repeat Simple_repeat 1 41 0 216 356 9 17 chr20 63894787 63894902 -8258980 + (CATATA)n Simple_repeat Simple_repeat 2 115 0 721 314 181 15 chr20 63894934 63895469 -8258413 + L2 LINE L2 2690 3311 -2 186 209 0 0 chr20 63897116 63897159 -8256723 + A-rich Low_complexity Low_complexity 1 43 0 261 247 113 10 chr20 63898510 63898607 -8255275 + Charlie8 DNA MER1_type 33 139 -2278 813 142 16 16 chr20 63898614 63898741 -8255141 - FLAM_A SINE Alu -3 139 13 2202 40 0 37 chr20 63898960 63899233 -8254649 + AluY SINE Alu 1 263 -48 195 42 0 0 chr20 63899241 63899265 -8254617 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 766 147 9 0 chr20 63899591 63899700 -8254182 - FLAM_C SINE Alu -22 121 12 917 198 0 0 chr20 63899843 63900000 -8253882 + FRAM SINE Alu 1 156 -20 199 339 0 15 chr20 63900158 63900223 -8253659 + L2 LINE L2 3159 3222 -91 600 286 207 11 chr20 63901335 63901962 -8251920 + L2 LINE L2 2583 3313 0 195 186 0 0 chr20 63901962 63902005 -8251877 + (TCCA)n Simple_repeat Simple_repeat 1 43 0 304 323 21 0 chr20 63902041 63902134 -8251748 + L3 LINE CR1 1410 1504 -73 2833 10 0 0 chr20 63902511 63902815 -8251067 + AluYa5 SINE Alu 1 304 -7 297 298 44 0 chr20 63903453 63903567 -8250315 + MIR SINE MIR 73 191 -71 799 269 18 0 chr20 63903717 63903888 -8249994 - MER45A DNA AcHobo -4 174 1 257 282 24 73 chr20 63903994 63904118 -8249764 - MIR SINE MIR -64 198 81 2232 122 64 25 chr20 63904343 63904704 -8249178 - THE1C LTR MaLR 0 375 1 195 320 90 0 chr20 63905997 63906075 -8247807 - MIR SINE MIR -3 259 175 712 211 189 61 chr20 63906382 63906554 -8247328 + ORSL DNA AcHobo 19 228 -47 1603 160 62 0 chr20 63906554 63906829 -8247053 + AluJb SINE Alu 3 294 -18 712 211 189 61 chr20 63906829 63906884 -8246998 + ORSL DNA AcHobo 228 275 0 270 0 0 0 chr20 63906924 63906954 -8246928 + (CA)n Simple_repeat Simple_repeat 1 30 0 446 294 83 58 chr20 63907038 63907523 -8246359 - MLT1J LTR MaLR -7 504 8 2207 142 32 18 chr20 63908090 63908473 -8245409 - L1MA4A LINE L1 -23 6280 5826 1784 109 95 18 chr20 63908473 63908758 -8245124 - AluSg SINE Alu -3 307 1 2207 142 32 18 chr20 63908758 63908879 -8245003 - L1MA4A LINE L1 -477 5826 5708 428 236 18 27 chr20 63908972 63909082 -8244800 + MER81 DNA DNA 1 109 -5 646 231 29 134 chr20 63909139 63909259 -8244623 - MIR SINE MIR 0 262 186 2418 71 0 16 chr20 63909259 63909570 -8244312 - AluY SINE Alu -5 306 1 646 231 29 134 chr20 63909570 63909726 -8244156 - MIR SINE MIR -76 186 15 310 180 0 0 chr20 63909884 63909934 -8243948 - L1MA4A LINE L1 -966 5180 5131 692 206 0 22 chr20 63909967 63910103 -8243779 - FLAM_A SINE Alu 0 133 1 582 232 30 30 chr20 63910147 63910311 -8243571 + MER20 DNA MER1_type 54 217 -2 309 313 32 16 chr20 63910340 63910477 -8243405 - MIR3 SINE MIR -56 152 13 425 268 106 14 chr20 63910694 63910836 -8243046 + MIR SINE MIR 43 197 -65 548 201 106 62 chr20 63910973 63911152 -8242730 + MER112 DNA MER1_type 34 220 -40 821 230 37 37 chr20 63911159 63911438 -8242444 + L1ME1 LINE L1 5891 6178 -6 248 215 71 36 chr20 63911580 63911685 -8242197 + LTR48B LTR ERV1 1 114 -508 863 195 101 109 chr20 63911738 63912076 -8241806 + MER39 LTR ERV1 373 707 0 2147 150 30 22 chr20 63912080 63912441 -8241441 - THE1B LTR MaLR 0 364 1 384 292 115 24 chr20 63912465 63912674 -8241208 - MIR SINE MIR -10 252 25 21 0 0 0 chr20 63913290 63913311 -8240571 + AT_rich Low_complexity Low_complexity 1 21 0 381 227 56 86 chr20 63913449 63913729 -8240153 + Charlie8 DNA MER1_type 72 1428 -989 190 174 116 29 chr20 63914371 63914440 -8239442 - MIR SINE MIR -67 195 121 2095 106 0 0 chr20 63914501 63914776 -8239106 - AluSc SINE Alu -34 275 1 256 209 47 58 chr20 63914799 63914885 -8238997 + LTR48B LTR ERV1 4 88 -556 * 1157 212 131 33 chr20 63914855 63915339 -8238543 + MER39 LTR ERV1 52 707 0 185 292 46 0 chr20 63916918 63916983 -8236899 + L3 LINE CR1 266 333 -1244 1913 208 63 17 chr20 63917067 63917493 -8236389 - MER45B DNA AcHobo -541 1040 543 3886 108 84 0 chr20 63917493 63918079 -8235803 + MER41B LTR ERV1 1 635 0 1913 208 63 17 chr20 63918079 63918322 -8235560 - MER45B DNA AcHobo -1038 543 313 1627 135 55 33 chr20 63918323 63918511 -8235371 - MER4A LTR ERV1 -2 662 480 2236 90 40 3 chr20 63918511 63918810 -8235072 + AluSg SINE Alu 1 310 0 1627 135 55 33 chr20 63918810 63919159 -8234723 - MER4A LTR ERV1 -184 480 1 1483 217 33 0 chr20 63919161 63919465 -8234417 - MER45B DNA AcHobo -726 314 1 2091 241 32 16 chr20 63919562 63920118 -8233764 - MER119 DNA MER1_type -14 569 5 211 261 22 0 chr20 63920128 63920174 -8233708 + MIR SINE MIR 20 66 -196 329 351 30 22 chr20 63920432 63920566 -8233316 - L2 LINE L2 0 3272 3138 1237 213 91 0 chr20 63920653 63920916 -8232966 + AluJo SINE Alu 1 287 -15 183 80 0 0 chr20 63920919 63920944 -8232938 + (TAAAA)n Simple_repeat Simple_repeat 1 25 0 198 335 98 30 chr20 63920969 63921133 -8232749 - L2 LINE L2 -205 3067 2893 777 247 0 0 chr20 63921281 63921447 -8232435 - MER58A DNA MER1_type 0 166 1 2852 155 27 20 chr20 63921643 63921906 -8231976 + L1MA3 LINE L1 5220 5480 -825 2321 90 0 3 chr20 63921906 63922205 -8231677 + AluSg SINE Alu 1 298 -12 2852 155 27 20 chr20 63922205 63922775 -8231107 + L1MA3 LINE L1 5480 6025 -280 1996 144 23 21 chr20 63922519 63922907 -8230975 + L1PB4 LINE L1 5764 6152 -4 * 418 248 53 34 chr20 63922917 63923183 -8230699 + L1M4 LINE L1 3195 3465 -2681 1138 250 74 16 chr20 63923208 63923640 -8230242 - HERVL74 LTR ERVL -4104 1581 1125 1784 155 145 18 chr20 63923682 63924062 -8229820 - MSTA LTR MaLR 0 428 1 21 36 0 0 chr20 63924148 63924176 -8229706 + AT_rich Low_complexity Low_complexity 1 28 0 595 181 113 73 chr20 63925929 63926000 -8227882 + MER58A DNA MER1_type 40 107 -2313 2339 95 0 19 chr20 63926000 63926316 -8227566 + AluSx SINE Alu 1 310 -2 595 181 113 73 chr20 63926316 63926421 -8227461 + MER58A DNA MER1_type 107 223 -1 624 274 48 48 chr20 63926435 63926665 -8227217 + MIR SINE MIR 12 241 -21 417 119 0 0 chr20 63927261 63927328 -8226554 + MER53 DNA DNA 120 186 -3 255 271 75 45 chr20 63927501 63927634 -8226248 + L2 LINE L2 3175 3311 -2 1086 130 24 5 chr20 63928422 63928629 -8225253 - L1P LINE L1 -765 5381 5171 446 212 0 0 chr20 63928624 63928723 -8225159 + L1MC/D LINE L1 5696 5794 -539 * 716 292 40 12 chr20 63929385 63929628 -8224254 + MIR SINE MIR 1 262 0 266 222 0 0 chr20 63930049 63930103 -8223779 + MLT1F1 LTR MaLR 72 125 -442 2042 181 77 46 chr20 63930107 63930677 -8223205 + L1MD3 LINE L1 7407 7994 -1 1607 198 24 47 chr20 63931966 63932403 -8221479 - MER63 DNA MER1_type 0 1061 6 1955 138 7 14 chr20 63932521 63932811 -8221071 - AluSx SINE Alu -24 288 1 852 181 23 59 chr20 63933395 63933616 -8220266 + MER20 DNA MER1_type 1 213 -6 1169 226 49 55 chr20 63933926 63934293 -8219589 + MLT1A1 LTR MaLR 1 365 0 2437 74 0 0 chr20 63934668 63934966 -8218916 - AluY SINE Alu -13 298 1 210 296 25 69 chr20 63936346 63936505 -8217377 - L2 LINE L2 -6 3307 3156 402 324 6 17 chr20 63937815 63937994 -8215888 + CT-rich Low_complexity Low_complexity 2 178 0 285 29 0 0 chr20 63938003 63938037 -8215845 + (TG)n Simple_repeat Simple_repeat 2 35 0 26 0 0 0 chr20 63939389 63939415 -8214467 + AT_rich Low_complexity Low_complexity 1 26 0 299 98 39 0 chr20 63939558 63939609 -8214273 + CT-rich Low_complexity Low_complexity 1 53 0 242 254 172 30 chr20 63939778 63939947 -8213935 + MLT1K LTR MaLR 394 586 -2 1631 191 165 32 chr20 63940221 63940713 -8213169 + MER89 LTR ERV1 3 559 0 1315 187 110 19 chr20 63940972 63941346 -8212536 - LTR37A LTR ERV1 -15 411 4 304 245 51 10 chr20 63941420 63941518 -8212364 + MER88 LTR ERVL 79 180 -284 * 928 268 99 34 chr20 63941449 63941893 -8211989 - MER74A LTR ERVL -85 473 1 520 325 66 35 chr20 63941917 63942145 -8211737 - MIR SINE MIR 0 262 28 518 351 68 10 chr20 63943046 63943354 -8210528 + L2 LINE L2 2966 3291 -22 1487 163 43 40 chr20 63943360 63943660 -8210222 - AluJo SINE Alu -11 301 1 666 279 182 42 chr20 63943685 63944471 -8209411 + L2 LINE L2 2403 3305 -8 284 311 113 7 chr20 63944493 63944644 -8209238 + MER96 DNA MER1_type? 8 174 -1 327 308 211 0 chr20 63945447 63945551 -8208331 - L2 LINE L2 -4 3268 3143 244 195 0 0 chr20 63946312 63946353 -8207529 + MER21B LTR ERV1 23 63 -800 2122 234 84 53 chr20 63946386 63947161 -8206721 + MER21B LTR ERV1 54 852 -11 304 316 70 19 chr20 63947990 63948161 -8205721 + MIR SINE MIR 74 260 -2 715 294 27 57 chr20 63948823 63949017 -8204865 - LTR16C LTR ERVL 0 491 293 1626 129 167 3 chr20 63949017 63949382 -8204500 - MSTB LTR MaLR -1 425 1 715 294 27 57 chr20 63949382 63949625 -8204257 - LTR16C LTR ERVL -198 293 67 217 304 14 0 chr20 63949658 63949727 -8204155 + MIR SINE MIR 171 240 -22 348 94 0 0 chr20 63950443 63950496 -8203386 + (CA)n Simple_repeat Simple_repeat 2 54 0 25 0 0 0 chr20 63951315 63951340 -8202542 + AT_rich Low_complexity Low_complexity 1 25 0 369 317 69 0 chr20 63951894 63952039 -8201843 + MIR SINE MIR 106 260 -2 1628 182 90 28 chr20 63952178 63952699 -8201183 + MLT2A2 LTR ERVL 1 554 0 210 351 0 0 chr20 63952874 63952948 -8200934 + GA-rich Low_complexity Low_complexity 1 74 0 262 181 0 84 chr20 63953021 63953104 -8200778 + MLT1K LTR MaLR 513 588 0 2567 114 17 0 chr20 63953445 63953803 -8200079 - THE1B LTR MaLR 0 364 1 250 372 85 24 chr20 63954005 63954169 -8199713 + MIR3 SINE MIR 31 204 -4 207 0 0 0 chr20 63955022 63955045 -8198837 + (T)n Simple_repeat Simple_repeat 1 23 0 528 77 0 0 chr20 63955937 63956015 -8197867 + (CTA)n Simple_repeat Simple_repeat 1 78 0 2104 118 7 3 chr20 63956015 63956312 -8197570 - AluSx SINE Alu -14 298 1 294 350 44 33 chr20 63956514 63956694 -8197188 - MIR SINE MIR -56 206 25 359 267 79 36 chr20 63956747 63956903 -8196979 + MIR SINE MIR 1 162 -46 2960 73 2 17 chr20 63956914 63957325 -8196557 + L1PA10 LINE L1 5749 6153 -15 42 20 0 0 chr20 63957396 63957445 -8196437 + AT_rich Low_complexity Low_complexity 1 49 0 211 341 11 104 chr20 63957551 63957838 -8196044 + L2 LINE L2 3005 3264 -8 250 265 10 41 chr20 63959659 63959757 -8194125 + (CATATA)n Simple_repeat Simple_repeat 6 100 0 239 250 27 7 chr20 63959768 63959916 -8193966 + (CATA)n Simple_repeat Simple_repeat 2 152 0 258 317 20 0 chr20 63959950 63960051 -8193831 + (TATATG)n Simple_repeat Simple_repeat 5 107 0 369 248 229 0 chr20 63961991 63962096 -8191786 - MER5A DNA MER1_type 0 189 61 200 246 35 53 chr20 63962132 63962189 -8191693 - MER5A DNA MER1_type -130 59 4 2150 92 3 33 chr20 63962673 63962976 -8190906 + AluSg SINE Alu 1 294 -16 23 0 0 0 chr20 63964726 63964749 -8189133 + AT_rich Low_complexity Low_complexity 1 23 0 1122 150 183 113 chr20 63965186 63965586 -8188296 - MSTA LTR MaLR 0 428 1 245 311 114 6 chr20 63965978 63966145 -8187737 + L2 LINE L2 2470 2654 -660 270 0 0 0 chr20 63967198 63967228 -8186654 + (CA)n Simple_repeat Simple_repeat 2 31 0 198 283 0 0 chr20 63967312 63967358 -8186524 + L2 LINE L2 2714 2759 -555 550 214 54 102 chr20 63968137 63968395 -8185487 + MIR SINE MIR 4 256 -6 267 316 252 0 chr20 63968424 63968563 -8185319 + MER5A DNA MER1_type 7 180 -9 2131 123 0 0 chr20 63968575 63968868 -8185014 - AluSg SINE Alu -17 293 1 252 330 11 0 chr20 63969000 63969094 -8184788 + (CAA)n Simple_repeat Simple_repeat 2 96 0 916 286 13 0 chr20 63969096 63969323 -8184559 - MIR SINE MIR -27 235 6 262 318 55 0 chr20 63969532 63969642 -8184240 + L2 LINE L2 3155 3270 -2 197 256 23 0 chr20 63969878 63969921 -8183961 - L2 LINE L2 -19 3294 3251 233 264 42 0 chr20 63969975 63970047 -8183835 - Tigger5 DNA MER2_type -2 2321 2247 260 266 0 0 chr20 63970054 63970118 -8183764 + Tigger5 DNA MER2_type 2257 2320 -3 * 376 176 14 14 chr20 63970118 63970191 -8183691 - Tigger5 DNA MER2_type -2245 78 6 313 313 139 0 chr20 63970895 63971010 -8182872 - MIR SINE MIR -131 131 1 926 253 126 44 chr20 63971161 63971513 -8182369 + MLT1E LTR MaLR 20 420 -173 1672 187 50 25 chr20 63971513 63971876 -8182006 - MLT1A2 LTR MaLR 0 374 3 926 253 126 44 chr20 63971876 63971982 -8181900 + MLT1E LTR MaLR 420 516 -77 696 83 0 0 chr20 63972055 63972151 -8181731 - L1MA2 LINE L1 -8 6296 6201 525 265 72 51 chr20 63972419 63972751 -8181131 + LTR16C LTR ERVL 153 491 0 207 328 104 24 chr20 63972866 63972991 -8180891 + MER5A DNA MER1_type 5 139 -50 * 240 363 77 0 chr20 63972904 63972995 -8180887 - MER5A DNA MER1_type -34 155 58 217 344 114 0 chr20 63973067 63973198 -8180684 - L2 LINE L2 -443 2871 2726 24 0 0 0 chr20 63973962 63973986 -8179896 + AT_rich Low_complexity Low_complexity 1 24 0 282 241 13 25 chr20 63973986 63974065 -8179817 + CT-rich Low_complexity Low_complexity 1 78 0 840 210 11 17 chr20 63974371 63974547 -8179335 - FAM SINE Alu 0 175 1 2173 107 0 3 chr20 63977567 63977867 -8176015 + AluSg SINE Alu 1 299 -11 505 287 86 6 chr20 63978039 63978213 -8175669 - MIR SINE MIR -12 250 63 306 158 0 0 chr20 63978426 63978483 -8175399 - MLT2B1 LTR ERVL 0 520 464 221 207 11 0 chr20 63978514 63978601 -8175281 + (TA)n Simple_repeat Simple_repeat 2 89 0 703 112 47 0 chr20 63978617 63978787 -8175095 + (TA)n Simple_repeat Simple_repeat 2 179 0 329 222 44 0 chr20 63978787 63978877 -8175005 - L1MC4 LINE L1 -1337 6705 6612 398 93 47 0 chr20 63978877 63978963 -8174919 + (TA)n Simple_repeat Simple_repeat 1 90 0 273 175 16 0 chr20 63978965 63979028 -8174854 + ERVL-B1 LTR ERVL 5694 5757 -7 1197 184 30 30 chr20 63979028 63979295 -8174587 + MLT2B1 LTR ERVL 1 267 -253 206 163 41 0 chr20 63979323 63979421 -8174461 + (TA)n Simple_repeat Simple_repeat 2 103 0 831 207 18 0 chr20 63979422 63979591 -8174291 - MLT2B1 LTR ERVL -40 480 309 255 114 0 0 chr20 63979598 63979633 -8174249 - MLT2B1 LTR ERVL -144 376 342 233 96 87 10 chr20 63979633 63979737 -8174145 + (TA)n Simple_repeat Simple_repeat 1 112 0 1235 176 30 30 chr20 63979737 63980004 -8173878 - MLT2B1 LTR ERVL -253 267 1 6961 163 12 12 chr20 63980004 63981281 -8172601 - ERVL-B1 LTR ERVL -7 5757 4481 304 335 33 26 chr20 63981391 63981543 -8172339 - L3 LINE CR1 -60 1517 1365 2225 128 0 0 chr20 63981866 63982163 -8171719 + AluSx SINE Alu 5 301 -11 7070 50 15 2 chr20 63982511 63984087 -8169795 - L1PA7 LINE L1 0 6154 4571 2276 99 7 0 chr20 63984372 63984665 -8169217 - AluSg SINE Alu -15 295 1 1242 159 34 128 chr20 63984900 63985251 -8168631 + AluYb8 SINE Alu 1 318 0 328 304 70 57 chr20 63985256 63985483 -8168399 + L1ME LINE L1 5566 5795 -326 11883 21 0 1 chr20 63985824 63987995 -8165887 + L1PA3 LINE L1 3989 6155 0 21 0 0 0 chr20 63989185 63989206 -8164676 + AT_rich Low_complexity Low_complexity 1 21 0 803 229 5 26 chr20 63989577 63989769 -8164113 - MER5A DNA MER1_type 0 189 2 277 294 89 44 chr20 63989802 63990050 -8163832 - MLT1J LTR MaLR -8 503 245 287 195 24 61 chr20 63990228 63990310 -8163572 - MLT1L LTR MaLR -536 79 1 241 270 35 15 chr20 63990927 63991127 -8162755 + HAL1 LINE L1 1117 1320 -1187 308 286 103 32 chr20 63991639 63991765 -8162117 + MIR SINE MIR 49 183 -79 455 306 103 37 chr20 63992570 63992812 -8161070 - MIR SINE MIR 0 262 5 2312 105 0 0 chr20 63993218 63993523 -8160359 - AluSg SINE Alu -5 305 1 595 277 7 14 chr20 63993584 63993732 -8160150 - MER5B DNA MER1_type -22 156 10 570 312 83 0 chr20 63994027 63994293 -8159589 + LTR16A1 LTR ERVL 168 455 -2 275 306 172 29 chr20 63994411 63994620 -8159262 + L2 LINE L2 2821 3059 -213 2222 123 3 0 chr20 63995195 63995503 -8158379 + AluSx SINE Alu 1 309 -3 199 62 0 31 chr20 63995632 63995664 -8158218 + L2 LINE L2 3279 3309 -4 294 250 35 60 chr20 63996036 63996152 -8157730 - MIR SINE MIR -3 259 147 336 289 12 0 chr20 63996202 63996285 -8157597 + L2 LINE L2 3229 3312 -1 533 243 162 0 chr20 63996388 63996536 -8157346 + MER5A DNA MER1_type 18 189 0 2339 85 0 16 chr20 63996667 63996974 -8156908 + AluY SINE Alu 1 302 -9 197 278 22 100 chr20 63997013 63997103 -8156779 - L2 LINE L2 -47 3225 3143 283 195 41 0 chr20 63997363 63997486 -8156396 + (TA)n Simple_repeat Simple_repeat 2 129 0 280 244 58 47 chr20 63997506 63997592 -8156290 + MIR SINE MIR 173 259 -3 319 208 10 20 chr20 63997712 63997813 -8156069 + (CATA)n Simple_repeat Simple_repeat 3 102 0 195 324 0 0 chr20 63997997 63998065 -8155817 - MER5B DNA MER1_type -110 68 1 272 235 188 0 chr20 63998130 63998215 -8155667 - MER5A DNA MER1_type -80 109 9 24 32 0 0 chr20 63998944 63998975 -8154907 + AT_rich Low_complexity Low_complexity 1 31 0 1850 137 74 47 chr20 63998988 63999353 -8154529 - THE1C LTR MaLR 0 375 1 4124 118 13 9 chr20 63999378 64000049 -8153833 - L1P LINE L1 -1489 4657 3984 4802 91 38 4 chr20 64000049 64000748 -8153134 + L1PA10 LINE L1 5438 6168 0 2268 263 110 20 chr20 64000771 64001812 -8152070 + L1MEc LINE L1 686 1874 -4522 2314 115 0 0 chr20 64001812 64002116 -8151766 - AluSx SINE Alu -8 304 1 2268 263 110 20 chr20 64002116 64002398 -8151484 + L1MEc LINE L1 1874 2129 -4267 500 181 62 34 chr20 64002488 64002665 -8151217 + L1M4 LINE L1 4313 4494 -1652 * 617 316 45 41 chr20 64002659 64003264 -8150618 + L1MEc LINE L1 1381 1987 -4409 27 0 0 0 chr20 64003365 64003392 -8150490 + AT_rich Low_complexity Low_complexity 1 27 0 15654 234 25 25 chr20 64003441 64008899 -8144983 + L1P4 LINE L1 24 5480 -2123 854 142 0 15 chr20 64008899 64009033 -8144849 - FLAM_C SINE Alu -1 132 1 15654 234 25 25 chr20 64009033 64009851 -8144031 + L1P4 LINE L1 5480 6580 -1023 2353 53 7 13 chr20 64009851 64010152 -8143730 + AluY SINE Alu 1 299 -12 15654 234 25 25 chr20 64010152 64010460 -8143422 + L1P4 LINE L1 6580 6886 -717 15627 25 5 0 chr20 64010497 64013042 -8140840 - L1PA3 LINE L1 -179 5976 3425 401 306 110 42 chr20 64013871 64014458 -8139424 + L2 LINE L2 2686 3311 -2 254 305 98 0 chr20 64014460 64014542 -8139340 - L2 LINE L2 -13 3300 3211 410 285 65 27 chr20 64014734 64014920 -8138962 - MER117 DNA MER1_type -2 195 3 201 147 0 0 chr20 64015553 64015587 -8138295 + (TG)n Simple_repeat Simple_repeat 1 34 0 45 45 0 0 chr20 64015726 64015792 -8138090 + AT_rich Low_complexity Low_complexity 1 66 0 570 253 88 84 chr20 64015895 64016156 -8137726 - MIR SINE MIR 0 262 1 22 0 0 0 chr20 64016304 64016326 -8137556 + AT_rich Low_complexity Low_complexity 1 22 0 644 225 63 89 chr20 64017194 64017311 -8136571 - MER5A DNA MER1_type -3 186 74 1657 215 20 6 chr20 64017311 64017669 -8136213 - MLT1A1 LTR MaLR 0 365 3 644 225 63 89 chr20 64017669 64017742 -8136140 - MER5A DNA MER1_type -115 74 1 265 317 52 9 chr20 64017784 64017980 -8135902 + L1ME3 LINE L1 5703 5908 -254 1219 193 0 0 chr20 64018217 64018440 -8135442 + Tigger1 DNA MER2_type 3 225 -2193 * 5958 141 22 20 chr20 64018438 64019508 -8134374 + Tigger1 DNA MER2_type 1001 2067 -351 1965 121 53 3 chr20 64019508 64019790 -8134092 + AluSx SINE Alu 1 296 -16 5958 141 22 20 chr20 64019790 64019896 -8133986 + Tigger1 DNA MER2_type 2067 2171 -247 2024 192 43 22 chr20 64019896 64020313 -8133569 + MSTB LTR MaLR 1 426 0 5958 141 22 20 chr20 64020313 64020456 -8133426 + Tigger1 DNA MER2_type 2171 2415 -3 5047 153 80 71 chr20 64020462 64021215 -8132667 + Tigger3b DNA MER2_type 2 747 -2281 2067 110 7 3 chr20 64021215 64021506 -8132376 + AluSg1 SINE Alu 1 292 -17 5047 153 80 71 chr20 64021506 64021884 -8131998 + Tigger3b DNA MER2_type 747 1120 -1908 396 182 74 66 chr20 64021884 64022005 -8131877 + FLAM_A SINE Alu 1 122 -11 2257 93 3 3 chr20 64022011 64022313 -8131569 + AluY SINE Alu 1 302 -9 5047 153 80 71 chr20 64022313 64022356 -8131526 + Tigger3b DNA MER2_type 1124 1165 -1863 2276 102 3 0 chr20 64022356 64022649 -8131233 + AluSx SINE Alu 1 294 -18 5047 153 80 71 chr20 64022649 64022684 -8131198 + Tigger3b DNA MER2_type 1165 1231 0 213 175 0 0 chr20 64022684 64022724 -8131158 + (TA)n Simple_repeat Simple_repeat 1 40 0 201 195 0 0 chr20 64022766 64022807 -8131075 + (CATA)n Simple_repeat Simple_repeat 2 42 0 192 200 0 0 chr20 64022846 64022886 -8130996 + (TA)n Simple_repeat Simple_repeat 1 40 0 967 236 71 9 chr20 64022886 64023111 -8130771 - MER8 DNA MER2_type 0 239 1 1699 184 56 40 chr20 64023158 64023531 -8130351 + MLT2D LTR ERVL 1 480 -40 208 238 12 12 chr20 64023533 64023613 -8130269 + (CATA)n Simple_repeat Simple_repeat 4 83 0 237 300 27 82 chr20 64023710 64023820 -8130062 - MLT1K LTR MaLR -464 124 21 2074 191 26 4 chr20 64024635 64025090 -8128792 - L1MB1 LINE L1 -1 6167 5703 1162 198 5 0 chr20 64025105 64025322 -8128560 + L1PB3 LINE L1 5931 6148 -6 30 0 0 0 chr20 64025322 64025352 -8128530 + AT_rich Low_complexity Low_complexity 1 30 0 664 212 26 124 chr20 64026067 64026293 -8127589 + MIR SINE MIR 30 233 -29 22 0 0 0 chr20 64027195 64027217 -8126665 + AT_rich Low_complexity Low_complexity 1 22 0 189 226 0 0 chr20 64028035 64028088 -8125794 + GA-rich Low_complexity Low_complexity 1 53 0 341 317 44 29 chr20 64028705 64028910 -8124972 + MLT1J LTR MaLR 248 455 -56 378 0 0 0 chr20 64028910 64028952 -8124930 + (TG)n Simple_repeat Simple_repeat 2 43 0 811 235 101 58 chr20 64029861 64030206 -8123676 + L2 LINE L2 2954 3313 0 1500 196 39 7 chr20 64030290 64030576 -8123306 - AluJo SINE Alu -17 295 1 29 28 0 0 chr20 64030614 64030650 -8123232 + AT_rich Low_complexity Low_complexity 1 36 0 1437 219 49 71 chr20 64030704 64031157 -8122725 + MLT1E2 LTR MaLR 80 522 -104 361 246 4 26 chr20 64031254 64031370 -8122512 + MLT1K LTR MaLR 147 252 -348 180 77 0 0 chr20 64031551 64031577 -8122305 + (TAA)n Simple_repeat Simple_repeat 1 26 0 26 50 0 0 chr20 64031739 64031779 -8122103 + AT_rich Low_complexity Low_complexity 1 40 0 3910 246 94 14 chr20 64031789 64033477 -8120405 + L1M4c LINE L1 2350 4182 -2200 2160 245 50 33 chr20 64033481 64034411 -8119471 - L1ME1 LINE L1 -192 5974 5023 28 29 0 0 chr20 64034466 64034501 -8119381 + AT_rich Low_complexity Low_complexity 1 35 0 2136 96 58 0 chr20 64035449 64035740 -8118142 - AluSc SINE Alu -1 308 1 300 357 36 7 chr20 64037116 64037256 -8116626 - MLT1K LTR MaLR -256 332 189 650 304 21 80 chr20 64037335 64037454 -8116428 + LTR16C LTR ERVL 17 142 -349 778 193 16 31 chr20 64037454 64037646 -8116236 - MER53 DNA DNA 0 189 1 650 304 21 80 chr20 64037646 64037812 -8116070 + LTR16C LTR ERVL 142 285 -206 2175 112 3 13 chr20 64037915 64038228 -8115654 - AluSg SINE Alu 0 310 1 216 339 9 45 chr20 64038360 64038472 -8115410 - MIR SINE MIR -71 191 84 1026 225 9 5 chr20 64039129 64039347 -8114535 + MER20 DNA MER1_type 1 219 0 2297 86 0 0 chr20 64039626 64039929 -8113953 - AluSg SINE Alu 0 303 1 184 167 0 0 chr20 64039938 64039974 -8113908 - L2 LINE L2 0 3313 3278 185 108 27 0 chr20 64040042 64040079 -8113803 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 340 300 64 7 chr20 64040303 64040443 -8113439 + MIR SINE MIR 102 249 -13 454 292 12 25 chr20 64040548 64040709 -8113173 + L2 LINE L2 3155 3313 0 302 0 26 0 chr20 64043079 64043117 -8110765 + (TTA)n Simple_repeat Simple_repeat 3 41 0 7501 25 10 7 chr20 64043117 64044256 -8109626 - L1PA3 LINE L1 -18 6137 4998 250 227 0 34 chr20 64044277 64044365 -8109517 + CT-rich Low_complexity Low_complexity 1 85 0 327 128 0 0 chr20 64045095 64045142 -8108740 - MLT2D LTR ERVL 0 414 368 2147 140 10 3 chr20 64045190 64045627 -8108255 + L1MA3 LINE L1 5167 5605 -697 297 210 14 145 chr20 64045628 64045766 -8108116 - MLT2D LTR ERVL -281 133 14 4275 107 31 3 chr20 64045766 64046437 -8107445 + L1MA3 LINE L1 5616 6305 0 787 209 84 123 chr20 64046440 64046521 -8107361 - MLT2D LTR ERVL -65 349 266 1394 221 50 28 chr20 64046521 64046883 -8106999 - MLT1A2 LTR MaLR -4 370 1 787 209 84 123 chr20 64046883 64047160 -8106722 - MLT2D LTR ERVL -148 266 5 1986 78 47 0 chr20 64047766 64048061 -8105821 + AluY SINE Alu 17 323 0 24 32 0 0 chr20 64048150 64048181 -8105701 + AT_rich Low_complexity Low_complexity 1 31 0 1250 100 11 0 chr20 64048505 64048685 -8105197 + L1MA1 LINE L1 5859 6040 -262 31 0 0 0 chr20 64048999 64049030 -8104852 + AT_rich Low_complexity Low_complexity 1 31 0 27 62 0 0 chr20 64049591 64049639 -8104243 + AT_rich Low_complexity Low_complexity 1 48 0 22 0 0 0 chr20 64050003 64050025 -8103857 + AT_rich Low_complexity Low_complexity 1 22 0 518 269 42 47 chr20 64050371 64050583 -8103299 + HAL1 LINE L1 2 212 -2295 230 306 24 12 chr20 64050605 64050690 -8103192 + HAL1 LINE L1 290 375 -2132 246 236 0 45 chr20 64050759 64050848 -8103034 + HAL1 LINE L1 2303 2387 -120 1273 217 58 4 chr20 64050856 64051132 -8102750 + AluJo SINE Alu 18 308 -4 24 77 0 0 chr20 64051316 64051368 -8102514 + AT_rich Low_complexity Low_complexity 1 52 0 2281 117 0 0 chr20 64051462 64051770 -8102112 - AluY SINE Alu -3 308 1 4144 181 104 102 chr20 64051842 64052299 -8101583 + L1MC3 LINE L1 6380 6835 -950 351 0 0 0 chr20 64052299 64052338 -8101544 + (CA)n Simple_repeat Simple_repeat 2 40 0 4144 181 104 102 chr20 64052338 64052600 -8101282 + L1MC3 LINE L1 6835 7095 -690 289 291 0 12 chr20 64052600 64052686 -8101196 + MLT1J LTR MaLR 41 125 -442 4144 181 104 102 chr20 64052686 64053274 -8100608 + L1MC3 LINE L1 7095 7776 -9 995 298 98 57 chr20 64053926 64054661 -8099221 + L2 LINE L2 1893 2657 -657 454 210 21 65 chr20 64054669 64054855 -8099027 + MER104 DNA Tc2 1 178 -2 421 308 8 80 chr20 64054865 64055115 -8098767 + L2 LINE L2 2669 2900 -414 351 302 62 22 chr20 64055310 64055489 -8098393 + L2 LINE L2 3118 3303 -10 262 358 68 20 chr20 64055584 64055732 -8098150 + MIR3 SINE MIR 35 189 -19 2829 222 85 48 chr20 64055892 64056844 -8097038 + L1MC3 LINE L1 6702 7688 -97 435 306 0 66 chr20 64057151 64057334 -8096548 + MLT1J LTR MaLR 232 402 -109 1211 232 28 9 chr20 64057362 64057685 -8096197 + LTR52 LTR ERVL 2 330 -91 1788 182 80 0 chr20 64057689 64058090 -8095792 - L1MA9 LINE L1 -7 6305 5873 480 165 41 0 chr20 64058092 64058189 -8095693 + LTR52 LTR ERVL 319 419 -2 1368 241 55 104 chr20 64058313 64058554 -8095328 + MLT1E LTR MaLR 1 252 -341 2439 57 0 16 chr20 64058554 64058870 -8095012 - AluY SINE Alu 0 311 1 1368 241 55 104 chr20 64058870 64059245 -8094637 + MLT1E LTR MaLR 252 587 -6 2315 204 104 27 chr20 64059389 64060021 -8093861 + LTR8 LTR ERV1 11 691 0 198 228 18 18 chr20 64060021 64060078 -8093804 - MIR SINE MIR -203 59 3 2020 198 47 5 chr20 64060688 64061097 -8092785 + MSTB LTR MaLR 1 426 0 239 339 9 43 chr20 64061337 64061452 -8092430 + L2 LINE L2 3201 3311 -2 257 135 19 0 chr20 64061595 64061647 -8092235 + (TGGA)n Simple_repeat Simple_repeat 1 53 0 361 298 49 63 chr20 64061939 64062144 -8091738 - MIR SINE MIR -55 207 6 380 306 124 38 chr20 64062434 64062620 -8091262 + MIR SINE MIR 8 209 -53 2357 64 0 3 chr20 64063834 64064130 -8089752 + AluY SINE Alu 1 295 -16 317 181 72 87 chr20 64064480 64064618 -8089264 - L1ME4a LINE L1 -24 6097 5962 204 200 0 0 chr20 64064621 64064666 -8089216 + CT-rich Low_complexity Low_complexity 3 47 0 241 337 65 0 chr20 64064736 64064828 -8089054 + MIR SINE MIR 154 251 -11 591 315 108 27 chr20 64065598 64066116 -8087766 + L1MC/D LINE L1 5265 5824 -1984 1238 266 93 8 chr20 64066120 64066613 -8087269 + L1ME3 LINE L1 5409 5943 -219 5238 167 31 14 chr20 64066628 64067839 -8086043 + L1MA8 LINE L1 5071 6290 -1 1664 168 3 25 chr20 64067845 64068131 -8085751 + AluJb SINE Alu 1 280 -32 462 88 0 0 chr20 64068131 64068199 -8085683 + (TAAA)n Simple_repeat Simple_repeat 1 68 0 1712 186 0 7 chr20 64068203 64068509 -8085373 + AluJb SINE Alu 1 304 -8 6405 140 18 21 chr20 64068698 64070403 -8083479 - L1MA3 LINE L1 -10 7714 6014 2750 182 18 0 chr20 64070400 64070943 -8082939 - L1MA3 LINE L1 -2125 5440 4888 * 6706 37 4 0 chr20 64070944 64071758 -8082124 - L1PA4 LINE L1 0 6155 5339 7067 47 1 6 chr20 64071758 64072655 -8081227 + L1P LINE L1 1213 2105 -4041 23077 162 13 12 chr20 64072658 64074207 -8079675 - L1MA3 LINE L1 -2675 4890 3345 17946 49 26 10 chr20 64074207 64077331 -8076551 - L1PA5 LINE L1 -7 6147 2975 23077 162 13 12 chr20 64077331 64080640 -8073242 - L1MA3 LINE L1 -4220 3345 22 225 316 32 32 chr20 64081303 64081398 -8072484 + MER5B DNA MER1_type 22 116 -62 414 39 0 0 chr20 64081417 64081469 -8072413 + (TG)n Simple_repeat Simple_repeat 1 52 0 2432 145 36 7 chr20 64081690 64082131 -8071751 - L1PB1 LINE L1 -3 6148 5695 587 131 20 0 chr20 64082179 64082278 -8071604 - L1PB2 LINE L1 -6 6145 6045 190 314 57 0 chr20 64082311 64082381 -8071501 + MIR SINE MIR 31 104 -158 191 298 53 0 chr20 64082412 64082469 -8071413 + MIR SINE MIR 203 262 0 233 208 56 42 chr20 64082688 64082760 -8071122 + L2 LINE L2 3233 3305 -8 240 231 66 88 chr20 64083232 64083323 -8070559 - MIR SINE MIR -92 116 28 2187 117 3 0 chr20 64083343 64083650 -8070232 - AluSp SINE Alu -5 308 1 1519 197 7 4 chr20 64083679 64083948 -8069934 - AluJb SINE Alu -42 270 1 1507 163 24 31 chr20 64084190 64084484 -8069398 + AluJo SINE Alu 6 297 -15 288 278 40 142 chr20 64084664 64084799 -8069083 - L2 LINE L2 -51 3262 3115 2492 57 0 0 chr20 64084799 64085100 -8068782 + AluY SINE Alu 1 301 -10 288 278 40 142 chr20 64085100 64085317 -8068565 - L2 LINE L2 -198 3115 2946 975 257 0 5 chr20 64085362 64085584 -8068298 - MER58A DNA MER1_type 0 224 4 245 328 95 26 chr20 64086293 64086409 -8067473 + L2 LINE L2 3137 3260 -12 195 288 17 0 chr20 64086768 64086827 -8067055 - MIR SINE MIR -56 206 147 181 286 36 18 chr20 64086894 64086950 -8066932 - MIR SINE MIR -155 107 51 439 300 74 99 chr20 64087261 64087785 -8066097 + MLT1J LTR MaLR 1 511 0 2547 43 3 3 chr20 64087944 64088249 -8065633 - AluY SINE Alu -6 305 1 479 283 154 48 chr20 64088839 64089023 -8064859 + L2 LINE L2 2919 3082 -231 201 39 0 0 chr20 64089023 64089049 -8064833 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 479 283 154 48 chr20 64089049 64089221 -8064661 + L2 LINE L2 3082 3313 0 196 335 120 25 chr20 64090565 64090723 -8063159 + L2 LINE L2 2706 2878 -436 381 287 119 0 chr20 64090835 64091037 -8062845 + MER96B DNA MER1_type? 192 417 0 199 313 175 0 chr20 64091328 64091408 -8062474 - MIR SINE MIR -163 99 6 27549 65 6 2 chr20 64091508 64095908 -8057974 + L1PA5 LINE L1 1740 6151 -3 752 232 21 57 chr20 64096626 64096820 -8057062 - MER58A DNA MER1_type -37 187 1 418 295 31 0 chr20 64097104 64097233 -8056649 + MIR SINE MIR 81 213 -49 22 0 0 0 chr20 64098041 64098063 -8055819 + AT_rich Low_complexity Low_complexity 1 22 0 2385 84 0 3 chr20 64098882 64099192 -8054690 + AluY SINE Alu 3 311 0 277 338 13 0 chr20 64099520 64099597 -8054285 - MIR SINE MIR -61 147 70 2098 108 34 7 chr20 64099687 64099983 -8053899 - AluSx SINE Alu -8 304 1 520 329 7 66 chr20 64100258 64100532 -8053350 - MIR SINE MIR -3 259 2 7633 22 0 2 chr20 64101334 64102441 -8051441 + L1PA3 LINE L1 5048 6152 -3 2552 48 0 3 chr20 64103420 64103731 -8050151 - AluY SINE Alu -1 310 1 2305 172 6 40 chr20 64103953 64104471 -8049411 - L1MB4 LINE L1 0 6180 5681 583 289 55 34 chr20 64104637 64104872 -8049010 - MIR SINE MIR -21 241 2 302 317 15 10 chr20 64105067 64105187 -8048695 + CT-rich Low_complexity Low_complexity 1 120 0 22 0 0 0 chr20 64105792 64105814 -8048068 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr20 64105861 64105883 -8047999 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr20 64105904 64105926 -8047956 + AT_rich Low_complexity Low_complexity 1 22 0 621 255 41 5 chr20 64105989 64106185 -8047697 + L1MC/D LINE L1 4876 5078 -1068 1421 161 78 110 chr20 64106284 64106884 -8046998 + L1MC/D LINE L1 5133 5714 -630 * 5204 111 14 7 chr20 64106882 64107650 -8046232 - L1PA14 LINE L1 -2 6159 5386 471 238 136 54 chr20 64107795 64108127 -8045755 + L1ME4a LINE L1 4474 4832 -1314 340 332 104 30 chr20 64108365 64108633 -8045249 + L1ME4a LINE L1 5394 5681 -440 409 195 12 12 chr20 64108711 64108793 -8045089 - MIR SINE MIR -93 169 88 369 307 9 0 chr20 64108795 64108909 -8044973 + L1ME4a LINE L1 5688 5802 -2006 315 0 0 0 chr20 64109017 64109052 -8044830 + (TG)n Simple_repeat Simple_repeat 2 36 0 3332 72 0 0 chr20 64110466 64110908 -8042974 + L1PA13 LINE L1 5722 6163 0 243 0 0 0 chr20 64110982 64111009 -8042873 + (TG)n Simple_repeat Simple_repeat 2 28 0 413 209 23 0 chr20 64111041 64111127 -8042755 - MER5B DNA MER1_type -88 90 3 680 12 24 0 chr20 64111186 64111270 -8042612 + (GGAA)n Simple_repeat Simple_repeat 3 88 0 239 176 55 11 chr20 64111355 64111446 -8042436 + L1ME4a LINE L1 6027 6121 0 22 56 0 0 chr20 64111559 64111595 -8042287 + AT_rich Low_complexity Low_complexity 1 36 0 210 37 0 0 chr20 64111731 64111758 -8042124 + (TTTTG)n Simple_repeat Simple_repeat 1 27 0 2065 133 0 3 chr20 64111758 64112039 -8041843 - AluSx SINE Alu -32 280 1 333 263 127 62 chr20 64112192 64112451 -8041431 + L1MC4a LINE L1 5686 5961 -1847 263 321 18 0 chr20 64112697 64112809 -8041073 + (TA)n Simple_repeat Simple_repeat 1 114 0 326 207 24 49 chr20 64113471 64113553 -8040329 + MIR SINE MIR 77 156 -106 252 345 41 58 chr20 64114588 64114759 -8039123 - MIR SINE MIR -49 213 46 654 13 0 0 chr20 64114798 64114874 -8039008 + L1PA5 LINE L1 6073 6148 -6 210 349 0 23 chr20 64114945 64115031 -8038851 - L2 LINE L2 -1 3312 3229 211 278 83 28 chr20 64115452 64115560 -8038322 - MIR SINE MIR -71 191 78 290 300 22 44 chr20 64115812 64115902 -8037980 + L2 LINE L2 3184 3271 -1 293 290 81 74 chr20 64116344 64116899 -8036983 + L1MEd LINE L1 602 1160 -4959 1039 205 11 19 chr20 64117128 64117396 -8036486 + L1MA4 LINE L1 6031 6296 -4 204 258 194 16 chr20 64118012 64118136 -8035746 - MIR SINE MIR -6 256 111 226 0 0 56 chr20 64118371 64118407 -8035475 + (TAAAA)n Simple_repeat Simple_repeat 2 35 0 204 153 82 0 chr20 64119642 64119727 -8034155 + (TA)n Simple_repeat Simple_repeat 1 92 0 358 343 83 6 chr20 64119776 64119945 -8033937 - MIR SINE MIR -66 196 15 435 151 57 0 chr20 64120023 64120182 -8033700 + (TA)n Simple_repeat Simple_repeat 2 169 0 344 347 32 32 chr20 64120187 64120406 -8033476 - MIR SINE MIR -14 248 30 2273 101 0 13 chr20 64120417 64120725 -8033157 - AluSx SINE Alu -8 304 1 1089 294 47 60 chr20 64120758 64121359 -8032523 + MLT1E LTR MaLR 1 593 0 959 189 296 0 chr20 64122060 64122293 -8031589 + AluJb SINE Alu 1 302 0 539 308 66 87 chr20 64123244 64123818 -8030064 - MLT1K LTR MaLR -25 563 2 295 291 101 77 chr20 64124694 64125072 -8028810 - L2 LINE L2 -3 3310 2924 652 144 62 0 chr20 64125262 64125408 -8028474 + L1MA8 LINE L1 6130 6284 -7 389 264 54 39 chr20 64125408 64125531 -8028351 + L2 LINE L2 3189 3313 0 302 303 50 34 chr20 64125841 64125960 -8027922 - L2 LINE L2 0 3313 3193 242 307 79 7 chr20 64126245 64126385 -8027497 - LTR16C LTR ERVL -39 452 303 615 229 86 6 chr20 64126604 64126779 -8027103 + MER5A DNA MER1_type 1 189 0 466 315 97 9 chr20 64127268 64127484 -8026398 + MIR SINE MIR 2 236 -26 233 151 19 0 chr20 64129082 64129135 -8024747 + GA-rich Low_complexity Low_complexity 1 54 0 1371 174 62 44 chr20 64129890 64130165 -8023717 + THE1B LTR MaLR 85 364 0 531 281 118 24 chr20 64130228 64130474 -8023408 - MLT1K LTR MaLR -298 290 22 2122 123 0 0 chr20 64131194 64131494 -8022388 - AluSx SINE Alu -10 302 3 21 57 0 0 chr20 64132501 64132536 -8021346 + AT_rich Low_complexity Low_complexity 1 35 0 1793 123 0 25 chr20 64133496 64133772 -8020110 + AluSx SINE Alu 44 312 0 1309 73 0 0 chr20 64134039 64134204 -8019678 + AluY SINE Alu 142 306 -5 2378 275 57 39 chr20 64134452 64135573 -8018309 + L1MC4 LINE L1 6834 7974 -68 308 276 109 40 chr20 64136170 64136344 -8017538 + L1M4 LINE L1 3662 3847 -2299 272 339 85 45 chr20 64138175 64138661 -8015221 - L2 LINE L2 -38 3275 2766 258 285 31 0 chr20 64138688 64138818 -8015064 + (TA)n Simple_repeat Simple_repeat 1 134 0 300 291 88 34 chr20 64138819 64138967 -8014915 - L1ME3A LINE L1 -27 6143 5988 1599 182 18 13 chr20 64138975 64139354 -8014528 - Ricksha_b DNA DNA -13 1638 1317 2040 151 3 0 chr20 64139354 64139652 -8014230 + AluSx SINE Alu 1 299 -13 3494 187 38 31 chr20 64139652 64140437 -8013445 - Ricksha_b DNA DNA -405 849 59 604 262 74 93 chr20 64140544 64140886 -8012996 - L1ME3A LINE L1 -201 5969 5622 297 0 0 0 chr20 64140886 64140919 -8012963 + (TTC)n Simple_repeat Simple_repeat 2 34 0 1987 134 3 3 chr20 64140919 64141232 -8012650 - AluSx SINE Alu 0 313 1 604 262 74 93 chr20 64141232 64141413 -8012469 - L1ME3A LINE L1 -546 5624 5454 886 335 143 28 chr20 64141464 64142540 -8011342 - L2 LINE L2 -757 2557 1358 243 0 0 0 chr20 64142725 64142752 -8011130 + (A)n Simple_repeat Simple_repeat 1 27 0 280 261 177 93 chr20 64142782 64143093 -8010789 - MLT1J LTR MaLR -64 447 111 228 333 52 0 chr20 64143207 64143303 -8010579 - L2 LINE L2 -2172 1142 1042 1835 159 3 3 chr20 64143728 64144023 -8009859 - AluSg SINE Alu -15 295 1 688 343 17 4 chr20 64144565 64144804 -8009078 - MIR SINE MIR -10 252 11 1376 236 35 50 chr20 64144874 64145199 -8008683 - MSTD LTR MaLR 0 396 77 2765 26 0 0 chr20 64145199 64145507 -8008375 + AluY SINE Alu 1 308 -3 1376 236 35 50 chr20 64145507 64145583 -8008299 - MSTD LTR MaLR -319 77 1 1596 166 3 40 chr20 64145953 64146255 -8007627 - AluJo SINE Alu -9 303 13 282 244 0 47 chr20 64148051 64148137 -8005745 + (CATATA)n Simple_repeat Simple_repeat 3 84 0 662 226 94 22 chr20 64148707 64148934 -8004948 + LTR16A1 LTR ERVL 12 221 -236 393 272 78 0 chr20 64148934 64149037 -8004845 - MER81 DNA DNA -3 111 1 662 226 94 22 chr20 64149037 64149186 -8004696 + LTR16A1 LTR ERVL 221 457 0 567 262 296 14 chr20 64149189 64149483 -8004399 - L2 LINE L2 -30 3283 2907 3731 41 68 0 chr20 64149620 64150079 -8003803 + LTR2B LTR ERV1 1 490 0 1952 112 29 4 chr20 64150721 64151028 -8002854 + AluSq SINE Alu 1 314 0 730 207 58 0 chr20 64151050 64151238 -8002644 + MER96B DNA MER1_type? 194 392 -25 327 252 8 92 chr20 64152168 64152287 -8001595 - MER102a DNA MER1_type -9 321 213 1657 182 0 24 chr20 64152314 64152610 -8001272 - AluJb SINE Alu -23 289 1 234 238 95 0 chr20 64152638 64152701 -8001181 - MER102a DNA MER1_type -210 120 52 462 324 73 66 chr20 64153725 64154275 -7999607 + L2 LINE L2 2739 3313 0 243 0 0 0 chr20 64154779 64154806 -7999076 + (A)n Simple_repeat Simple_repeat 1 27 0 292 330 18 9 chr20 64154842 64154954 -7998928 + L2 LINE L2 3192 3304 -9 297 282 0 0 chr20 64155043 64155121 -7998761 + L1MC4 LINE L1 6473 6550 -1492 3625 228 90 29 chr20 64155134 64155658 -7998224 + L1MC4 LINE L1 6687 7177 -865 1726 192 0 10 chr20 64155658 64155960 -7997922 - AluJo SINE Alu -13 299 1 3625 228 90 29 chr20 64155960 64156580 -7997302 + L1MC4 LINE L1 7177 7901 -141 289 365 9 9 chr20 64156795 64156910 -7996972 - L2 LINE L2 -6 3307 3193 2093 58 43 22 chr20 64156930 64157232 -7996650 + AluY SINE Alu 1 308 0 743 266 0 5 chr20 64157490 64157678 -7996204 + AluJo SINE Alu 120 306 -6 390 108 36 48 chr20 64158260 64158343 -7995539 - L1ME4a LINE L1 0 6121 6040 3390 161 49 65 chr20 64158352 64158653 -7995229 + LTR39 LTR ERV1 2 306 -477 3856 49 0 0 chr20 64158653 64159123 -7994759 + L1PA5 LINE L1 5672 6141 -13 3390 161 49 65 chr20 64159123 64159562 -7994320 + LTR39 LTR ERV1 306 730 -53 1718 234 35 65 chr20 64159587 64160099 -7993783 + MLT2B3 LTR ERVL 58 554 0 250 194 42 42 chr20 64160211 64160283 -7993599 + (CATATA)n Simple_repeat Simple_repeat 1 72 0 321 225 123 51 chr20 64160438 64160576 -7993306 - L1MC/D LINE L1 -2048 5760 5613 23 0 0 0 chr20 64160978 64161001 -7992881 + AT_rich Low_complexity Low_complexity 1 23 0 212 315 90 0 chr20 64161837 64161926 -7991956 - MIR SINE MIR -109 153 57 2114 107 31 3 chr20 64161932 64162221 -7991661 - AluSx SINE Alu -13 299 3 1960 171 40 36 chr20 64162316 64162856 -7991026 + MLT2A2 LTR ERVL 1 546 -8 2160 117 3 3 chr20 64162881 64163181 -7990701 - AluSq SINE Alu -13 300 1 270 0 0 0 chr20 64163215 64163245 -7990637 + (TG)n Simple_repeat Simple_repeat 1 30 0 * 378 42 0 0 chr20 64163244 64163292 -7990590 + (GA)n Simple_repeat Simple_repeat 1 48 0 348 334 44 57 chr20 64163719 64164036 -7989846 - Charlie8 DNA MER1_type -1963 454 142 925 229 137 19 chr20 64164052 64164366 -7989516 - L1MB8 LINE L1 0 6178 5828 304 230 0 0 chr20 64164366 64164440 -7989442 - Charlie8 DNA MER1_type -2272 145 72 1930 274 30 10 chr20 64164588 64165180 -7988702 + MER97a DNA MER1_type? 2 605 -289 355 279 83 35 chr20 64165248 64165477 -7988405 + MER97c DNA MER1_type? 814 1053 -37 1363 298 135 15 chr20 64165521 64166249 -7987633 - L2 LINE L2 -790 2524 1710 285 318 31 36 chr20 64166407 64166599 -7987283 - L2 LINE L2 -1606 1708 1518 1506 293 168 18 chr20 64166955 64167692 -7986190 - L2 LINE L2 -1797 1517 670 1909 196 14 6 chr20 64167776 64168138 -7985744 + MLT1A1 LTR MaLR 1 365 0 525 250 67 49 chr20 64168771 64168987 -7984895 - MIR SINE MIR -8 254 36 196 182 0 68 chr20 64169067 64169111 -7984771 + MIR SINE MIR 112 152 -110 199 128 51 0 chr20 64169244 64169283 -7984599 - L2 LINE L2 0 3313 3273 451 231 105 21 chr20 64169496 64169639 -7984243 + MIR SINE MIR 88 242 -20 337 252 45 21 chr20 64169653 64169756 -7984126 + MIR SINE MIR 34 141 -67 479 371 81 17 chr20 64169772 64170179 -7983703 - L2 LINE L2 -10 3303 2871 561 193 0 0 chr20 64170270 64170405 -7983477 + (TA)n Simple_repeat Simple_repeat 2 136 0 2395 98 0 9 chr20 64170406 64170721 -7983161 - AluSx SINE Alu 0 312 1 1100 190 34 0 chr20 64170722 64170959 -7982923 - L1MA7 LINE L1 -21 6270 6026 546 306 118 37 chr20 64172002 64172299 -7981583 + MLT1I LTR MaLR 89 409 0 293 300 91 0 chr20 64172319 64172429 -7981453 - MIR SINE MIR -79 183 64 467 317 44 34 chr20 64172499 64172704 -7981178 + MIR SINE MIR 39 245 -17 194 297 14 27 chr20 64172788 64172862 -7981020 - MIR SINE MIR -55 153 81 351 136 0 0 chr20 64173271 64173330 -7980552 + (GGGA)n Simple_repeat Simple_repeat 4 62 0 699 35 0 0 chr20 64173334 64173420 -7980462 + (GGGAA)n Simple_repeat Simple_repeat 4 89 0 263 379 65 0 chr20 64174258 64174382 -7979500 - L2 LINE L2 0 3272 3141 203 255 20 0 chr20 64174804 64174855 -7979027 - L2 LINE L2 -1 3312 3261 443 289 116 0 chr20 64175148 64175338 -7978544 + MIR SINE MIR 48 259 -3 26 50 0 0 chr20 64175657 64175697 -7978185 + AT_rich Low_complexity Low_complexity 1 40 0 180 272 78 29 chr20 64177067 64177170 -7976712 - MIR SINE MIR -61 201 94 180 0 0 0 chr20 64177856 64177876 -7976006 + (T)n Simple_repeat Simple_repeat 1 20 0 1447 90 25 5 chr20 64177978 64178179 -7975703 - L1PA7 LINE L1 0 6154 5950 2524 77 0 0 chr20 64178196 64178507 -7975375 - AluY SINE Alu 0 311 1 492 18 0 0 chr20 64178576 64178633 -7975249 + (TG)n Simple_repeat Simple_repeat 2 58 0 1312 239 4 7 chr20 64178821 64179097 -7974785 + MLT1A1 LTR MaLR 79 353 -12 817 277 143 18 chr20 64179330 64179730 -7974152 + MLT1G1 LTR MaLR 45 529 -66 413 323 34 8 chr20 64180186 64180375 -7973507 + MIR SINE MIR 21 212 -50 184 351 21 32 chr20 64180480 64180574 -7973308 + MIR SINE MIR 168 260 -2 819 316 92 9 chr20 64180995 64181343 -7972539 - LTR16A LTR ERVL -6 444 68 2416 90 7 0 chr20 64181440 64181750 -7972132 + AluSq SINE Alu 1 312 -1 318 301 142 0 chr20 64181778 64181891 -7971991 + MLT1J LTR MaLR 306 530 -85 243 0 0 0 chr20 64181923 64181950 -7971932 + (TA)n Simple_repeat Simple_repeat 2 28 0 432 113 66 13 chr20 64183522 64183673 -7970209 + (TA)n Simple_repeat Simple_repeat 1 159 0 268 179 54 12 chr20 64183746 64183914 -7969968 + (TA)n Simple_repeat Simple_repeat 2 176 0 284 140 40 0 chr20 64184015 64184065 -7969817 + L1MDa LINE L1 1834 1885 -4655 876 206 111 4 chr20 64184186 64184441 -7969441 + L1MC/D LINE L1 5238 5517 -743 1113 248 135 30 chr20 64184451 64184773 -7969109 - L1ME LINE L1 -5120 950 663 2158 119 0 13 chr20 64184773 64185084 -7968798 - AluSx SINE Alu -5 307 1 1113 248 135 30 chr20 64185084 64185301 -7968581 - L1ME LINE L1 -5407 663 354 2011 153 40 113 chr20 64185303 64185807 -7968075 - MLT1C LTR MaLR 0 467 1 323 294 87 39 chr20 64187203 64187641 -7966241 + L1ME LINE L1 4378 4836 -1310 2530 45 0 0 chr20 64188779 64189071 -7964811 - AluY SINE Alu -18 293 2 2423 241 64 40 chr20 64189082 64189644 -7964238 - L1MD2 LINE L1 -1 6358 5764 3443 125 14 6 chr20 64189644 64190164 -7963718 + MER1A DNA MER1_type 4 527 0 2423 241 64 40 chr20 64190164 64190502 -7963380 - L1MD2 LINE L1 -595 5764 5436 328 266 71 27 chr20 64190520 64190704 -7963178 - L1MD2 LINE L1 -1434 4712 4521 282 286 95 0 chr20 64191172 64191256 -7962626 - MER5C DNA MER1_type -3 321 230 445 317 0 0 chr20 64191269 64191389 -7962493 - MER5C DNA MER1_type -202 122 3 21 0 0 0 chr20 64192031 64192052 -7961830 + AT_rich Low_complexity Low_complexity 1 21 0 371 340 98 35 chr20 64192129 64192497 -7961385 + L1ME LINE L1 5348 5738 -383 4972 131 61 9 chr20 64192513 64193377 -7960505 + L1MA4 LINE L1 5392 6300 0 203 173 19 0 chr20 64194042 64194094 -7959788 + (TG)n Simple_repeat Simple_repeat 2 54 0 233 83 33 33 chr20 64194176 64194236 -7959646 + (TCTA)n Simple_repeat Simple_repeat 2 61 0 709 157 16 0 chr20 64194717 64194838 -7959044 + AluJo/FLAM SINE Alu 3 125 -177 1318 107 0 27 chr20 64194838 64194863 -7959019 + AluSg/x SINE Alu 126 150 -162 3996 59 0 0 chr20 64194863 64195353 -7958529 + LTR2B LTR ERV1 1 490 0 1318 107 0 27 chr20 64195353 64195514 -7958368 + AluSg/x SINE Alu 150 307 -5 315 286 0 51 chr20 64195732 64195830 -7958052 - MER20 DNA MER1_type -124 95 3 231 291 149 15 chr20 64195842 64195976 -7957906 - L2 LINE L2 -2 3311 3160 231 374 104 0 chr20 64196768 64196883 -7956999 - L2 LINE L2 -12 3260 3134 1431 279 94 18 chr20 64197770 64198272 -7955610 + MER69 DNA AcHobo 6 545 -1981 366 250 81 23 chr20 64198612 64198784 -7955098 + MER69 DNA AcHobo 2341 2522 -4 23 54 0 0 chr20 64199443 64199480 -7954402 + AT_rich Low_complexity Low_complexity 1 37 0 25 0 0 0 chr20 64199949 64199974 -7953908 + AT_rich Low_complexity Low_complexity 1 25 0 341 176 14 0 chr20 64200063 64200137 -7953745 + (TA)n Simple_repeat Simple_repeat 1 75 0 4199 98 2 0 chr20 64200620 64201199 -7952683 - L1PA12 LINE L1 -1 6167 5588 505 131 0 0 chr20 64201200 64201284 -7952598 + L1P LINE L1 4960 5043 -1103 836 286 97 31 chr20 64201374 64201959 -7951923 + L1M4 LINE L1 4589 5212 -934 2944 218 135 109 chr20 64201981 64202839 -7951043 + L1MCa LINE L1 46 881 -5545 2785 16 0 0 chr20 64202839 64203147 -7950735 + AluYa5 SINE Alu 1 308 -3 2944 218 135 109 chr20 64203147 64204534 -7949348 + L1MCa LINE L1 881 2403 -4023 2113 134 3 0 chr20 64204534 64204841 -7949041 + AluSc SINE Alu 1 308 -1 2944 218 135 109 chr20 64204841 64205996 -7947886 + L1MCa LINE L1 2403 3527 -2899 1362 253 101 55 chr20 64205993 64206806 -7947076 + L1M2a LINE L1 2 776 -6433 * 249 33 0 0 chr20 64206806 64206836 -7947046 + (CCA)n Simple_repeat Simple_repeat 2 31 0 1362 253 101 55 chr20 64206836 64207120 -7946762 + L1M2a LINE L1 776 1045 -6164 2362 136 8 6 chr20 64207120 64207481 -7946401 - THE1B LTR MaLR -2 362 1 1362 253 101 55 chr20 64207481 64207573 -7946309 + L1M2a LINE L1 1045 2081 -5128 1384 143 0 0 chr20 64207579 64207803 -7946079 - Tigger1 DNA MER2_type -1394 1024 801 442 285 21 30 chr20 64207927 64208118 -7945764 + MLT1F1 LTR MaLR 1 186 -381 2847 252 49 38 chr20 64208118 64209068 -7944814 + L1MD1 LINE L1 29 1051 -5489 1389 174 13 62 chr20 64209072 64209288 -7944594 - L1 LINE L1 -2923 3223 2998 3500 128 48 0 chr20 64209288 64209828 -7944054 + MER61E LTR ERV1 1 566 -3 1389 174 13 62 chr20 64209828 64209918 -7943964 - L1 LINE L1 -3148 2998 2937 2358 95 0 0 chr20 64209918 64210212 -7943670 - AluY SINE Alu -15 296 3 1389 174 13 62 chr20 64210212 64210290 -7943592 - L1 LINE L1 -3209 2937 2857 520 224 63 0 chr20 64210308 64210451 -7943431 + L1MD1 LINE L1 1087 1238 -5302 4917 119 19 16 chr20 64210466 64211219 -7942663 + MER4E LTR ERV1 1 755 -24 768 208 50 128 chr20 64211233 64211810 -7942072 + L1MD1 LINE L1 1275 1806 -4734 * 1977 210 23 23 chr20 64211793 64212191 -7941691 + L1MD1 LINE L1 5661 6061 -575 1874 212 55 68 chr20 64212191 64212752 -7941130 + MLT2B3 LTR ERVL 1 554 0 1977 210 23 23 chr20 64212752 64212829 -7941053 + L1MD1 LINE L1 6060 6136 -500 1722 218 73 34 chr20 64212832 64213299 -7940583 - MLT1D LTR MaLR -3 502 18 2172 179 35 22 chr20 64213311 64213802 -7940080 + L1MD1 LINE L1 6132 6628 -8 1297 220 71 48 chr20 64213813 64214209 -7939673 + MLT1F1 LTR MaLR 163 567 0 288 246 0 107 chr20 64214210 64214388 -7939494 + L1MD2 LINE L1 5612 5770 -394 251 256 35 12 chr20 64214596 64214682 -7939200 + (TATATG)n Simple_repeat Simple_repeat 3 90 0 1438 167 71 43 chr20 64215177 64215458 -7938424 + AluJo SINE Alu 1 289 -23 404 296 47 24 chr20 64215650 64215819 -7938063 + MIR SINE MIR 75 247 -15 720 219 40 70 chr20 64217136 64217465 -7936417 + L1MC5 LINE L1 7614 7932 -29 261 98 0 0 chr20 64217493 64217534 -7936348 + (TG)n Simple_repeat Simple_repeat 2 42 0 2494 141 159 38 chr20 64217900 64218448 -7935434 - LTR18B LTR ERVL 0 614 1 837 145 36 133 chr20 64218809 64218850 -7935032 + L1MDa LINE L1 2347 2390 -4150 1953 134 3 0 chr20 64218850 64219133 -7934749 - AluSx SINE Alu -23 289 6 837 145 36 133 chr20 64219133 64219428 -7934454 + L1MDa LINE L1 2390 2650 -3890 * 1174 265 44 59 chr20 64219427 64219779 -7934103 + L1MD2 LINE L1 5762 6118 -241 1865 130 32 7 chr20 64219779 64220056 -7933826 + AluSx SINE Alu 14 297 -15 324 0 0 0 chr20 64220066 64220102 -7933780 + (CA)n Simple_repeat Simple_repeat 2 37 0 1174 265 44 59 chr20 64220102 64220334 -7933548 + L1MD2 LINE L1 6127 6348 -11 642 273 121 102 chr20 64220337 64220871 -7933011 + MLT1G LTR MaLR 14 595 0 719 286 119 92 chr20 64221205 64221725 -7932157 - MLT1K LTR MaLR -5 583 50 281 358 8 16 chr20 64221766 64221889 -7931993 + MIR3 SINE MIR 85 206 -2 430 235 134 40 chr20 64222905 64223012 -7930870 - MIR SINE MIR -18 244 118 1699 145 52 80 chr20 64223012 64223398 -7930484 + THE1C LTR MaLR 1 375 0 430 235 134 40 chr20 64223398 64223439 -7930443 - MIR SINE MIR -144 118 82 1939 163 16 36 chr20 64224529 64224916 -7928966 + L1MA6 LINE L1 5912 6290 -10 307 340 12 31 chr20 64225235 64225397 -7928485 + MIR SINE MIR 90 248 -14 191 288 76 0 chr20 64225728 64225794 -7928088 + L2 LINE L2 3194 3264 -8 245 29 29 0 chr20 64226614 64226648 -7927234 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1729 159 18 11 chr20 64226653 64226936 -7926946 - AluJo SINE Alu -24 288 4 327 332 25 60 chr20 64227216 64227415 -7926467 + L2 LINE L2 2653 2844 -470 491 158 0 53 chr20 64227456 64227551 -7926331 + MLT1F LTR MaLR 265 354 -188 306 0 0 0 chr20 64227564 64227598 -7926284 + (CA)n Simple_repeat Simple_repeat 1 34 0 331 264 18 9 chr20 64227602 64227712 -7926170 + (TA)n Simple_repeat Simple_repeat 2 112 0 362 167 0 0 chr20 64227712 64227772 -7926110 + MLT1F LTR MaLR 508 567 0 473 357 11 11 chr20 64227788 64227973 -7925909 - MIR SINE MIR -30 232 48 248 109 0 22 chr20 64228345 64228391 -7925491 + (CAAAAA)n Simple_repeat Simple_repeat 4 48 0 1778 62 0 0 chr20 64228406 64228616 -7925266 + AluY SINE Alu 83 292 -19 2760 13 0 0 chr20 64228621 64228924 -7924958 + AluYa5 SINE Alu 1 303 -8 2364 96 0 0 chr20 64229478 64229779 -7924103 - AluSx SINE Alu -11 301 1 334 250 0 22 chr20 64230036 64230128 -7923754 - L1MC4 LINE L1 -1339 6703 6614 397 166 28 33 chr20 64230158 64230339 -7923543 + (TA)n Simple_repeat Simple_repeat 1 180 0 308 244 16 8 chr20 64230439 64230566 -7923316 + (TA)n Simple_repeat Simple_repeat 1 128 0 180 77 0 0 chr20 64230569 64230595 -7923287 + (TG)n Simple_repeat Simple_repeat 2 27 0 786 186 99 6 chr20 64231361 64231533 -7922349 - MER5A DNA MER1_type 0 189 2 322 40 0 20 chr20 64232277 64232327 -7921555 + L1PA4 LINE L1 6105 6153 -2 1602 229 19 45 chr20 64232417 64232713 -7921169 - MLT1E2 LTR MaLR 0 626 343 2038 144 3 0 chr20 64232713 64233005 -7920877 - AluSg SINE Alu -17 293 1 1602 229 19 45 chr20 64233005 64233131 -7920751 - MLT1E2 LTR MaLR -283 343 215 813 236 107 13 chr20 64233144 64233377 -7920505 - MIR SINE MIR 0 262 8 272 208 0 14 chr20 64233776 64233848 -7920034 + (TA)n Simple_repeat Simple_repeat 1 71 0 6597 197 27 40 chr20 64233907 64235415 -7918467 + L1MC3 LINE L1 6297 7785 0 2129 25 0 0 chr20 64235933 64236276 -7917606 - L1P2 LINE L1 -676 5479 5137 6007 23 16 0 chr20 64236276 64236965 -7916917 + L1PA3 LINE L1 5436 6150 -5 495 0 0 0 chr20 64237600 64237655 -7916227 + (TG)n Simple_repeat Simple_repeat 2 56 0 210 366 120 33 chr20 64238445 64238721 -7915161 + L2 LINE L2 2829 3128 -185 5152 177 37 6 chr20 64238805 64240446 -7913436 + L1MA5 LINE L1 4615 6300 0 243 250 0 0 chr20 64240818 64240878 -7913004 + (TCTA)n Simple_repeat Simple_repeat 4 63 0 421 322 67 67 chr20 64241002 64241344 -7912538 - L2 LINE L2 0 3272 2931 333 308 81 50 chr20 64241549 64241770 -7912112 + L1ME4a LINE L1 5850 6077 -44 953 220 125 44 chr20 64242256 64242551 -7911331 - MER58B DNA MER1_type -11 330 12 354 45 0 0 chr20 64244306 64244350 -7909532 + (CA)n Simple_repeat Simple_repeat 2 45 0 834 251 5 0 chr20 64244379 64244594 -7909288 + L1M4 LINE L1 3785 4000 -2146 11784 207 45 34 chr20 64245092 64246176 -7907706 + L1M2 LINE L1 1 1072 -5776 189 74 0 0 chr20 64246176 64246203 -7907679 + (CAA)n Simple_repeat Simple_repeat 1 27 0 11784 207 45 34 chr20 64246203 64248603 -7905279 + L1M2 LINE L1 1072 4043 -2805 11484 139 57 50 chr20 64248603 64250178 -7903704 + L1PA10 LINE L1 3425 5019 -1149 2245 100 0 3 chr20 64250178 64250469 -7903413 + AluSq SINE Alu 1 290 -23 11484 139 57 50 chr20 64250469 64251627 -7902255 + L1PA10 LINE L1 5019 6167 -1 2391 74 0 7 chr20 64253213 64253509 -7900373 + AluSc SINE Alu 1 294 -15 694 258 40 0 chr20 64253643 64253794 -7900088 + MER58A DNA MER1_type 30 186 -38 341 308 29 41 chr20 64254311 64254483 -7899399 + MIR3 SINE MIR 36 205 -3 577 350 52 28 chr20 64254587 64255013 -7898869 + MLT1K LTR MaLR 103 538 -50 2014 158 3 0 chr20 64256446 64256757 -7897125 - AluSp SINE Alu -1 312 1 326 160 9 28 chr20 64256872 64256978 -7896904 + GA-rich Low_complexity Low_complexity 2 105 0 371 317 158 0 chr20 64257056 64257239 -7896643 - MIR SINE MIR -2 260 49 568 220 75 44 chr20 64258242 64258401 -7895481 + MIR SINE MIR 1 164 -98 1994 236 78 27 chr20 64258408 64258994 -7894888 + MLT1E2 LTR MaLR 10 625 -1 288 0 0 0 chr20 64259596 64259628 -7894254 + (CA)n Simple_repeat Simple_repeat 2 33 0 342 305 0 19 chr20 64261078 64261183 -7892699 - MIR SINE MIR -115 147 45 653 222 0 69 chr20 64261197 64261400 -7892482 - MER5A DNA MER1_type 0 189 1 2159 118 6 10 chr20 64261514 64261827 -7892055 - AluSx SINE Alu 0 312 1 22 80 0 0 chr20 64262201 64262251 -7891631 + AT_rich Low_complexity Low_complexity 1 50 0 211 349 0 0 chr20 64262333 64262399 -7891483 - L2 LINE L2 -257 3056 2991 588 214 6 13 chr20 64262913 64263072 -7890810 - L1M4 LINE L1 -2371 3775 3618 * 1723 256 85 14 chr20 64263070 64263585 -7890297 - L1MDa LINE L1 -5201 1339 788 1358 263 84 22 chr20 64264899 64265510 -7888372 - L1ME1 LINE L1 0 6184 5510 556 259 7 0 chr20 64265510 64265649 -7888233 + L1M4 LINE L1 3716 3855 -2291 1595 306 102 61 chr20 64265662 64266956 -7886926 - L2 LINE L2 0 3313 1979 315 290 9 84 chr20 64267058 64267165 -7886717 + MLT1E LTR MaLR 4 102 -491 1009 300 15 40 chr20 64267193 64267520 -7886362 + MLT1E LTR MaLR 206 524 -69 2565 143 24 2 chr20 64267791 64268210 -7885672 - MSTA LTR MaLR 0 428 1 363 302 157 43 chr20 64268299 64268534 -7885348 + MIR SINE MIR 1 262 0 21 0 0 0 chr20 64268883 64268904 -7884978 + AT_rich Low_complexity Low_complexity 1 21 0 319 154 0 0 chr20 64268914 64268966 -7884916 + L1MC4 LINE L1 6652 6703 -1339 28 0 0 0 chr20 64269270 64269298 -7884584 + AT_rich Low_complexity Low_complexity 1 28 0 233 320 60 0 chr20 64269372 64269472 -7884410 + L2 LINE L2 3187 3292 -21 2214 111 17 0 chr20 64269479 64269777 -7884105 - AluSc SINE Alu -6 303 1 1902 218 7 31 chr20 64269778 64270074 -7883808 - MER74C LTR ERVL -9 451 149 2539 111 6 0 chr20 64270074 64270427 -7883455 - THE1A LTR MaLR 0 355 1 11085 98 31 3 chr20 64270427 64271965 -7881917 - THE1A-int LTR MaLR 0 1580 1 2821 73 3 0 chr20 64271965 64272319 -7881563 - THE1A LTR MaLR 0 355 1 1902 218 7 31 chr20 64272319 64272470 -7881412 - MER74C LTR ERVL -308 152 13 1360 150 29 80 chr20 64272478 64272831 -7881051 - L1MA9 LINE L1 -563 5749 5428 2875 169 22 7 chr20 64272831 64272854 -7881028 + L1MA9 LINE L1 5758 5779 -533 294 73 0 0 chr20 64272854 64272895 -7880987 + (TG)n Simple_repeat Simple_repeat 1 41 0 2875 169 22 7 chr20 64272895 64273411 -7880471 + L1MA9 LINE L1 5779 6305 -7 23 101 0 0 chr20 64273411 64273490 -7880392 + AT_rich Low_complexity Low_complexity 1 79 0 2139 142 0 0 chr20 64274512 64274821 -7879061 - AluSx SINE Alu -3 309 1 1534 185 14 28 chr20 64275089 64275376 -7878506 + AluJb SINE Alu 4 286 -26 21 0 0 0 chr20 64275376 64275397 -7878485 + AT_rich Low_complexity Low_complexity 1 21 0 1280 207 35 16 chr20 64276014 64276366 -7877516 + MER66A LTR ERV1 93 438 -40 2820 227 53 19 chr20 64276418 64277333 -7876549 + MER66A-int LTR ERV1 132 1114 -5562 568 245 50 13 chr20 64277412 64277571 -7876311 + MER66A-int LTR ERV1 2938 3102 -3574 8191 266 43 33 chr20 64277681 64282723 -7871159 + MER66A-int LTR ERV1 1210 4695 -1981 2560 126 44 7 chr20 64282723 64283136 -7870746 + MSTA LTR MaLR 1 428 0 8191 266 43 33 chr20 64283136 64283552 -7870330 + MER66A-int LTR ERV1 4695 5105 -1571 719 62 82 0 chr20 64283552 64283649 -7870233 + AluSc SINE Alu 19 123 -186 9289 149 9 5 chr20 64283649 64285204 -7868678 + MER66A-int LTR ERV1 5115 6676 0 1147 201 45 80 chr20 64285215 64285642 -7868240 + MER66A LTR ERV1 27 438 -40 429 276 89 20 chr20 64285821 64286421 -7867461 + L1ME3A LINE L1 5203 5886 -284 532 227 17 0 chr20 64286604 64286723 -7867159 - MER63 DNA MER1_type -313 749 3 181 138 0 0 chr20 64286771 64286800 -7867082 - L2 LINE L2 -1637 1677 1649 23 0 0 0 chr20 64287366 64287389 -7866493 + AT_rich Low_complexity Low_complexity 1 23 0 378 0 0 0 chr20 64287463 64287505 -7866377 + (TTA)n Simple_repeat Simple_repeat 3 44 0 22589 116 12 3 chr20 64287510 64288176 -7865706 - L1PA8 LINE L1 -15 6157 5498 2246 103 0 0 chr20 64288176 64288468 -7865414 - AluSc SINE Alu -17 292 1 22589 116 12 3 chr20 64288468 64292234 -7861648 - L1PA8 LINE L1 -674 5498 1694 300 325 123 26 chr20 64292541 64292695 -7861187 - MIR3 SINE MIR -10 198 30 217 301 117 56 chr20 64292794 64292990 -7860892 - MIR SINE MIR -32 230 23 344 299 59 45 chr20 64293694 64293915 -7859967 - MLT1K LTR MaLR -23 565 342 231 263 25 12 chr20 64294409 64294489 -7859393 + MIR SINE MIR 79 159 -103 1539 39 0 0 chr20 64295235 64295416 -7858466 - L1PA3 LINE L1 -3 6152 5972 1855 14 0 0 chr20 64295416 64295633 -7858249 + L1P1 LINE L1 5562 5778 -377 183 42 0 0 chr20 64296034 64296058 -7857824 + (ATG)n Simple_repeat Simple_repeat 1 24 0 2041 134 137 11 chr20 64296271 64296651 -7857231 - MSTA LTR MaLR 0 428 1 2019 132 3 9 chr20 64296918 64297244 -7856638 + L1PB1 LINE L1 5828 6151 0 39 0 0 0 chr20 64297244 64297283 -7856599 + AT_rich Low_complexity Low_complexity 1 39 0 3341 139 3 60 chr20 64297283 64297928 -7855954 - HSMAR2 DNA Mariner -694 608 1 337 322 35 55 chr20 64298277 64298566 -7855316 + L2 LINE L2 2196 2478 -836 213 290 16 32 chr20 64298589 64298651 -7855231 - MER5A DNA MER1_type -60 129 69 259 286 129 50 chr20 64299096 64299236 -7854646 + L2 LINE L2 3163 3313 0 6048 203 56 4 chr20 64299846 64300432 -7853450 + L1MA9 LINE L1 3613 4167 -2145 270 0 0 0 chr20 64300432 64300462 -7853420 + (CA)n Simple_repeat Simple_repeat 1 30 0 6048 203 56 4 chr20 64300462 64301936 -7851946 + L1MA9 LINE L1 4167 5780 -532 180 0 0 0 chr20 64301958 64301978 -7851904 + (TA)n Simple_repeat Simple_repeat 2 21 0 382 163 11 43 chr20 64301982 64302074 -7851808 - L1MA7 LINE L1 -421 5870 5782 258 192 39 26 chr20 64302074 64302082 -7851800 + (TA)n Simple_repeat Simple_repeat 1 7 -72 1924 137 0 4 chr20 64302082 64302391 -7851491 + AluSx SINE Alu 6 313 0 258 192 39 26 chr20 64302391 64302459 -7851423 + (TA)n Simple_repeat Simple_repeat 7 79 0 325 205 96 0 chr20 64302470 64302553 -7851329 - L1MC4 LINE L1 -1339 6703 6613 1605 225 29 21 chr20 64302568 64303053 -7850829 + L1MA9 LINE L1 5785 6273 -39 2138 110 3 10 chr20 64303154 64303453 -7850429 + AluY SINE Alu 1 297 -14 621 301 21 0 chr20 64303738 64303974 -7849908 - Zaphod DNA AcHobo -40 3991 3751 1935 178 15 0 chr20 64303979 64304321 -7849561 - MER7A DNA MER2_type 0 346 2 339 98 0 0 chr20 64304331 64304382 -7849500 - AluJo SINE Alu -10 292 242 1325 186 22 0 chr20 64304450 64304676 -7849206 - AluJo SINE Alu -69 243 13 250 151 54 75 chr20 64304689 64304782 -7849100 - Zaphod DNA AcHobo -316 3715 3625 26 0 0 0 chr20 64305233 64305259 -7848623 + AT_rich Low_complexity Low_complexity 1 26 0 24 32 0 0 chr20 64305496 64305527 -7848355 + AT_rich Low_complexity Low_complexity 1 31 0 22 0 0 0 chr20 64305715 64305737 -7848145 + AT_rich Low_complexity Low_complexity 1 22 0 219 253 23 58 chr20 64306645 64306732 -7847150 - L2 LINE L2 -515 2799 2716 291 204 97 35 chr20 64306855 64306968 -7846914 + L1ME4a LINE L1 6002 6121 0 195 42 0 0 chr20 64307082 64307106 -7846776 + (A)n Simple_repeat Simple_repeat 1 24 0 22 35 0 0 chr20 64307724 64307753 -7846129 + AT_rich Low_complexity Low_complexity 1 29 0 935 222 26 72 chr20 64307867 64308214 -7845668 + L1MB5 LINE L1 5567 5897 -277 426 54 0 0 chr20 64308252 64308308 -7845574 - L1PA5 LINE L1 -298 5856 5801 2091 50 0 29 chr20 64308308 64308586 -7845296 + L1PA5 LINE L1 5883 6154 0 21 36 0 0 chr20 64308784 64308812 -7845070 + AT_rich Low_complexity Low_complexity 1 28 0 650 312 43 12 chr20 64309754 64310430 -7843452 + L1ME LINE L1 967 1621 -4921 42187 39 0 3 chr20 64310434 64316599 -7837283 + L1PA3 LINE L1 9 6155 0 1994 143 3 13 chr20 64316747 64317055 -7836827 + AluY SINE Alu 1 305 -6 3933 189 66 11 chr20 64317083 64318034 -7835848 + L1MC3 LINE L1 5840 6843 -942 1143 260 104 13 chr20 64318033 64318502 -7835380 + L1M4 LINE L1 4641 5152 -994 * 1001 267 73 57 chr20 64318645 64319068 -7834814 - MLT1J1 LTR MaLR -16 430 1 712 314 18 18 chr20 64319266 64319549 -7834333 + MLT1K LTR MaLR 306 588 0 211 265 0 0 chr20 64320863 64320912 -7832970 - L2 LINE L2 -4 3309 3261 325 309 104 83 chr20 64322080 64322302 -7831580 + MLT1K LTR MaLR 96 329 -259 1935 166 14 11 chr20 64322302 64322663 -7831219 - MLT1A1 LTR MaLR 0 365 4 325 309 104 83 chr20 64322663 64322776 -7831106 + MLT1K LTR MaLR 329 438 -150 29 28 0 0 chr20 64322810 64322846 -7831036 + AT_rich Low_complexity Low_complexity 1 36 0 336 318 16 23 chr20 64322962 64323091 -7830791 + MIR SINE MIR 15 142 -120 456 361 0 31 chr20 64323332 64323523 -7830359 - MIR3 SINE MIR -3 205 21 21 0 0 0 chr20 64324166 64324187 -7829695 + AT_rich Low_complexity Low_complexity 1 21 0 2177 101 10 7 chr20 64324824 64325130 -7828752 + AluSc SINE Alu 1 307 -2 6270 187 22 4 chr20 64325555 64327822 -7826060 - L1PB3 LINE L1 -2 6868 4562 882 197 50 8 chr20 64327825 64328064 -7825818 - L1PB3 LINE L1 -4809 2054 1806 1615 191 129 6 chr20 64328064 64328404 -7825478 - MSTA LTR MaLR -44 384 3 3642 152 65 11 chr20 64328408 64329040 -7824842 - MSTA-int LTR MaLR -5 1575 910 508 81 0 0 chr20 64329047 64329121 -7824761 + L1MA2 LINE L1 6231 6304 0 439 285 83 48 chr20 64329140 64329368 -7824514 + L1ME LINE L1 990 1225 -4894 267 292 82 41 chr20 64329402 64329713 -7824169 + L1ME LINE L1 1411 1679 -839 7976 213 31 31 chr20 64330090 64332764 -7821118 + L1PA16 LINE L1 3473 6152 -14 490 253 58 70 chr20 64332953 64333194 -7820688 + L1ME LINE L1 2238 2475 -3654 29 28 0 0 chr20 64333700 64333736 -7820146 + AT_rich Low_complexity Low_complexity 1 36 0 253 347 112 21 chr20 64333793 64333988 -7819894 + L2 LINE L2 1966 2197 -1117 1689 163 24 14 chr20 64333988 64334282 -7819600 - AluSx SINE Alu -8 304 8 253 347 112 21 chr20 64334282 64334371 -7819511 + L2 LINE L2 2197 2276 -1038 758 119 45 8 chr20 64334689 64334823 -7819059 - L1MA7 LINE L1 -5 6286 6148 23 33 0 0 chr20 64334982 64335012 -7818870 + AT_rich Low_complexity Low_complexity 1 30 0 1445 240 36 54 chr20 64335266 64335770 -7818112 - L1ME2 LINE L1 -230 5934 5440 245 224 36 132 chr20 64335857 64336076 -7817806 + L1MC5 LINE L1 7359 7556 -405 1029 168 35 0 chr20 64336099 64336272 -7817610 + MER31A LTR ERV1 1 179 -306 1988 157 128 8 chr20 64336277 64336653 -7817229 - MSTA LTR MaLR -5 423 3 1123 171 18 12 chr20 64336656 64336915 -7816967 + MER31A LTR ERV1 174 438 -28 1199 240 74 87 chr20 64336981 64337536 -7816346 + MER31A-int LTR ERV1 13 560 -4376 412 217 57 0 chr20 64337585 64337691 -7816191 - MER31-int LTR ERV1 -4770 166 55 399 283 33 49 chr20 64337690 64337874 -7816008 + MER31A-int LTR ERV1 568 748 -4188 * 503 294 93 36 chr20 64337972 64338309 -7815573 - L1ME2 LINE L1 -845 5301 4948 2258 82 0 0 chr20 64338494 64338799 -7815083 - L1PA12 LINE L1 0 6168 5864 1154 176 45 0 chr20 64338799 64339021 -7814861 + L1P LINE L1 4774 5005 -1141 482 299 70 84 chr20 64339067 64339839 -7814043 + L1ME LINE L1 3572 4323 -1806 2181 157 8 16 chr20 64340015 64340391 -7813491 - THE1C LTR MaLR -2 373 1 317 375 48 0 chr20 64340514 64340682 -7813200 + L1ME LINE L1 5487 5662 -442 928 117 12 37 chr20 64340834 64340997 -7812885 + L1PA16 LINE L1 5889 6047 -119 444 257 37 9 chr20 64341119 64341228 -7812654 + MIR SINE MIR 37 148 -114 322 324 65 60 chr20 64341488 64341889 -7811993 + L1M4 LINE L1 2725 3131 -3015 3468 150 2 5 chr20 64341889 64342474 -7811408 - L1PA16 LINE L1 -8 6158 5576 322 324 65 60 chr20 64342474 64342652 -7811230 + L1M4 LINE L1 3131 3307 -2839 2281 100 0 3 chr20 64342809 64343109 -7810773 - AluSg SINE Alu -11 299 1 180 353 12 24 chr20 64343193 64343278 -7810604 - L2 LINE L2 0 3313 3230 2125 127 3 13 chr20 64343411 64343726 -7810156 - AluSx SINE Alu 0 312 1 504 232 70 38 chr20 64343728 64343913 -7809969 + MIR SINE MIR 46 236 -26 508 294 201 6 chr20 64344011 64344354 -7809528 - L2 LINE L2 -339 2975 2566 797 235 0 12 chr20 64344634 64344800 -7809082 + MER66A LTR ERV1 1 164 -314 507 335 13 0 chr20 64344925 64345152 -7808730 + L1ME LINE L1 5571 5800 -321 234 128 0 0 chr20 64345152 64345191 -7808691 + (TG)n Simple_repeat Simple_repeat 2 40 0 49 32 0 0 chr20 64345389 64345452 -7808430 + AT_rich Low_complexity Low_complexity 1 63 0 966 303 170 14 chr20 64346171 64346819 -7807063 + L2 LINE L2 1904 2652 -662 329 313 98 6 chr20 64347050 64347213 -7806669 - MER5B DNA MER1_type 0 178 1 180 296 0 0 chr20 64350724 64350768 -7803114 + L2 LINE L2 3268 3311 -2 2068 109 0 14 chr20 64351113 64351444 -7802438 - AluSg SINE Alu 0 328 2 2397 64 0 0 chr20 64351541 64351867 -7802015 + AluY SINE Alu 1 326 0 1944 146 10 0 chr20 64351876 64352170 -7801712 + AluSx SINE Alu 1 297 -15 189 369 119 19 chr20 64352242 64352502 -7801380 + L2 LINE L2 2364 2649 -665 2570 204 53 22 chr20 64352958 64353596 -7800286 - L1MB7 LINE L1 0 6184 5527 37 52 0 0 chr20 64354036 64354094 -7799788 + AT_rich Low_complexity Low_complexity 1 58 0 2170 51 0 0 chr20 64354592 64354847 -7799035 + AluY SINE Alu 46 300 -11 843 308 82 33 chr20 64354952 64355474 -7798408 + MLT1H LTR MaLR 1 548 -1 344 275 63 86 chr20 64355958 64356190 -7797692 + L1ME LINE L1 535 760 -5310 1244 248 122 67 chr20 64356190 64356921 -7796961 - LTR41 LTR ERVL -2 771 1 344 275 63 86 chr20 64356921 64356990 -7796892 + L1ME LINE L1 760 829 -5241 27 49 0 0 chr20 64357021 64357062 -7796820 + AT_rich Low_complexity Low_complexity 1 41 0 759 198 36 72 chr20 64357893 64358115 -7795767 + MER20 DNA MER1_type 4 217 -2 371 56 19 0 chr20 64359323 64359377 -7794505 + (TC)n Simple_repeat Simple_repeat 2 56 0 514 194 21 0 chr20 64360400 64360493 -7793389 + MER115 DNA AcHobo 598 692 -1 567 272 62 25 chr20 64360585 64360747 -7793135 - MER96 DNA MER1_type? 0 175 8 279 317 139 0 chr20 64360825 64360926 -7792956 - MLT1K LTR MaLR -329 259 145 186 326 11 32 chr20 64361116 64361211 -7792671 + MIR SINE MIR 169 261 -1 306 0 0 0 chr20 64361272 64361306 -7792576 + (CA)n Simple_repeat Simple_repeat 2 35 0 2142 236 126 39 chr20 64362257 64362979 -7790903 - MER21B LTR ERV1 -78 785 1 418 290 62 28 chr20 64362991 64363167 -7790715 + LTR33 LTR ERVL 20 201 -320 320 259 86 0 chr20 64363206 64363322 -7790560 + LTR33 LTR ERVL 334 459 -62 2615 230 16 20 chr20 64363362 64363975 -7789907 - MER45B DNA AcHobo 0 1040 430 891 198 0 0 chr20 64363999 64364161 -7789721 + FRAM SINE Alu 1 162 -14 2091 192 13 5 chr20 64364166 64364551 -7789331 - MER65A LTR ERV1 -20 425 38 701 146 9 0 chr20 64364568 64364595 -7789287 - FLAM_A SINE Alu -180 131 106 7470 32 0 0 chr20 64364595 64365923 -7787959 - L1PA4 LINE L1 -3 6152 4824 701 146 9 0 chr20 64365923 64366005 -7787877 - FLAM_A SINE Alu -205 106 21 331 288 108 9 chr20 64366047 64366158 -7787724 - MER45B DNA AcHobo -608 432 311 553 192 108 0 chr20 64366159 64366279 -7787603 - MER6 DNA MER2_type 0 865 733 199 275 0 117 chr20 64366279 64366399 -7787483 + L2 LINE L2 3168 3273 -40 318 280 163 19 chr20 64367313 64367620 -7786262 - L1ME4a LINE L1 -67 6054 5704 260 245 197 7 chr20 64367857 64368004 -7785878 + L1ME3A LINE L1 5326 5500 -662 405 226 125 2 chr20 64368015 64368122 -7785760 + L1ME3A LINE L1 5543 5659 -503 841 253 67 32 chr20 64368129 64368501 -7785381 + L1ME3A LINE L1 5774 6158 -12 218 282 186 19 chr20 64368909 64369065 -7784817 - MIR SINE MIR -62 200 19 1471 227 57 60 chr20 64369107 64369560 -7784322 + MER67D LTR ERV1 59 510 -4 207 0 0 0 chr20 64370414 64370437 -7783445 + (T)n Simple_repeat Simple_repeat 1 23 0 842 186 29 69 chr20 64370890 64371094 -7782788 + MER20 DNA MER1_type 24 219 0 235 250 164 47 chr20 64371209 64371337 -7782545 - MIR SINE MIR 0 262 120 490 283 92 44 chr20 64371551 64371935 -7781947 + L1ME3A LINE L1 4273 4692 -1454 1689 187 33 76 chr20 64371935 64372385 -7781497 + MSTB1 LTR MaLR 1 431 -1 490 283 92 44 chr20 64372385 64372545 -7781337 + L1ME3A LINE L1 4692 4843 -1303 1381 161 12 0 chr20 64372827 64373070 -7780812 + L1PA16 LINE L1 5912 6157 -9 750 287 97 28 chr20 64373075 64373612 -7780270 + L1ME3A LINE L1 5384 5957 -213 737 172 35 12 chr20 64374432 64374601 -7779281 - MER96B DNA MER1_type? -243 174 2 236 324 88 104 chr20 64375133 64375497 -7778385 - L2 LINE L2 -3 3269 2912 459 340 116 63 chr20 64375530 64376372 -7777510 - L2 LINE L2 -458 2856 1970 2223 220 31 61 chr20 64376374 64376914 -7776968 + MER77 LTR ERV1 10 533 -72 1124 266 23 6 chr20 64376915 64377264 -7776618 + L1M4 LINE L1 3860 4214 -1932 8941 214 76 15 chr20 64377269 64379583 -7774299 + L1MC/D LINE L1 23 2476 -4064 418 180 73 4 chr20 64379671 64379813 -7774069 + L1MC/D LINE L1 5606 5757 -783 384 59 0 0 chr20 64379811 64379862 -7774020 - L1P5 LINE L1 -669 5482 5432 * 1139 155 53 0 chr20 64379862 64380064 -7773818 + L1PB1 LINE L1 5927 6143 -8 979 196 24 22 chr20 64380088 64380346 -7773536 + L1MC/D LINE L1 5747 6017 -555 248 224 0 0 chr20 64381467 64381516 -7772366 + (ATG)n Simple_repeat Simple_repeat 2 50 0 2214 59 7 18 chr20 64381780 64382090 -7771792 + AluY SINE Alu 1 307 0 2193 99 0 0 chr20 64382101 64382409 -7771473 + AluSg SINE Alu 1 308 0 2700 81 22 6 chr20 64382464 64382822 -7771060 - THE1B LTR MaLR 0 364 1 485 94 0 0 chr20 64382828 64382916 -7770966 + Alu SINE Alu 227 314 0 420 81 40 0 chr20 64383176 64383250 -7770632 + GA-rich Low_complexity Low_complexity 2 78 0 1086 225 43 4 chr20 64383733 64383991 -7769891 - MER58B DNA MER1_type 0 341 74 431 256 0 11 chr20 64384757 64384847 -7769035 + LTR33 LTR ERVL 61 149 -372 629 183 11 17 chr20 64385051 64385231 -7768651 + GA-rich Low_complexity Low_complexity 1 179 0 189 107 0 0 chr20 64385279 64385307 -7768575 + (CA)n Simple_repeat Simple_repeat 1 28 0 1514 228 94 28 chr20 64385307 64385741 -7768141 - MLT2B1 LTR ERVL -43 477 15 350 359 28 11 chr20 64385741 64385922 -7767960 + LTR33 LTR ERVL 326 509 -12 276 337 51 0 chr20 64387228 64387326 -7766556 - L2 LINE L2 -19 3294 3192 352 73 0 266 chr20 64388064 64388173 -7765709 + MADE1 DNA Mariner 1 80 0 1765 214 14 48 chr20 64388543 64389044 -7764838 - L1MC3 LINE L1 -171 7614 7131 21 0 0 0 chr20 64389280 64389301 -7764581 + AT_rich Low_complexity Low_complexity 1 21 0 300 237 58 32 chr20 64389349 64389505 -7764377 - L1MC5 LINE L1 -433 7528 7369 189 0 0 0 chr20 64389600 64389621 -7764261 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 1451 185 0 11 chr20 64389640 64389900 -7763982 - AluJb SINE Alu -55 257 1 850 250 31 46 chr20 64389902 64390294 -7763588 - L1MC5 LINE L1 -722 7239 6854 2317 234 49 13 chr20 64390343 64390418 -7763464 - L1MB8 LINE L1 -9 6169 6098 1938 158 27 0 chr20 64390418 64390753 -7763129 + MER2 DNA MER2_type 1 344 0 2317 234 49 13 chr20 64390753 64391374 -7762508 - L1MB8 LINE L1 -80 6098 5426 564 285 59 22 chr20 64392048 64392083 -7761799 - MIR SINE MIR -10 252 220 2191 130 19 26 chr20 64392083 64392461 -7761421 - THE1C LTR MaLR 0 375 1 564 285 59 22 chr20 64392461 64392664 -7761218 - MIR SINE MIR -42 220 10 225 372 61 24 chr20 64393141 64393305 -7760577 - MER5A DNA MER1_type -19 170 1 980 74 12 25 chr20 64393528 64393690 -7760192 + (TTTC)n Simple_repeat Simple_repeat 1 160 0 2667 52 0 0 chr20 64394211 64394537 -7759345 - LTR17 LTR ERV1 -454 326 1 12664 50 1 0 chr20 64394537 64396053 -7757829 - HERV17 LTR ERV1 0 8626 7110 * 18993 43 0 2 chr20 64396042 64398296 -7755586 - HERV17 LTR ERV1 -2975 5651 3402 225 0 0 0 chr20 64399461 64399486 -7754396 + (TTAA)n Simple_repeat Simple_repeat 1 25 0 488 333 147 27 chr20 64399505 64399907 -7753975 - L2 LINE L2 -8 3305 2856 861 360 22 18 chr20 64399974 64400424 -7753458 - L2 LINE L2 -408 2906 2455 284 288 0 0 chr20 64400641 64400700 -7753182 - MER2 DNA MER2_type -1 344 286 31 26 0 0 chr20 64400700 64400738 -7753144 + AT_rich Low_complexity Low_complexity 1 38 0 1190 144 14 24 chr20 64400748 64400956 -7752926 - MER2 DNA MER2_type -139 206 1 621 279 152 39 chr20 64401155 64401510 -7752372 - MLT1J LTR MaLR -4 507 113 195 69 0 0 chr20 64401515 64401544 -7752338 + (TATG)n Simple_repeat Simple_repeat 2 30 0 183 80 0 0 chr20 64401856 64401881 -7752001 + (TGAA)n Simple_repeat Simple_repeat 4 28 0 1977 155 0 0 chr20 64402312 64402615 -7751267 + AluSx SINE Alu 4 306 -6 198 374 93 29 chr20 64403533 64403672 -7750210 - L2 LINE L2 0 3272 3125 2344 166 42 30 chr20 64405575 64406016 -7747866 + MER34 LTR ERV1 57 506 -36 198 118 0 0 chr20 64406016 64406050 -7747832 + (CAA)n Simple_repeat Simple_repeat 1 34 0 2344 166 42 30 chr20 64406050 64406079 -7747803 + MER34 LTR ERV1 506 533 -9 51 0 0 0 chr20 64407135 64407186 -7746696 + AT_rich Low_complexity Low_complexity 1 51 0 203 159 32 16 chr20 64407219 64407282 -7746600 + (TTA)n Simple_repeat Simple_repeat 1 64 0 2541 68 0 0 chr20 64407564 64407874 -7746008 + AluY SINE Alu 1 310 -1 671 297 137 42 chr20 64408288 64408642 -7745240 - MLT1J2 LTR MaLR -32 418 24 210 37 0 0 chr20 64408642 64408669 -7745213 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 671 297 137 42 chr20 64408669 64408695 -7745187 - MLT1J2 LTR MaLR -426 24 2 348 306 126 47 chr20 64408981 64409409 -7744473 + L1ME4a LINE L1 5462 5923 -198 2282 110 0 0 chr20 64409524 64409832 -7744050 - AluSx SINE Alu -4 308 1 204 360 8 24 chr20 64409838 64409963 -7743919 - L2 LINE L2 0 3313 3191 231 209 0 0 chr20 64410340 64410383 -7743499 + (TG)n Simple_repeat Simple_repeat 2 44 0 2998 235 72 29 chr20 64410439 64412295 -7741587 + L1MD2 LINE L1 4420 6355 -4 250 214 214 39 chr20 64412517 64412620 -7741262 + L2 LINE L2 3192 3312 -1 23 97 0 0 chr20 64412819 64412891 -7740991 + AT_rich Low_complexity Low_complexity 1 72 0 211 276 26 13 chr20 64413766 64413842 -7740040 + MER5A DNA MER1_type 55 131 -58 582 280 129 42 chr20 64414041 64414352 -7739530 + L2 LINE L2 2145 2482 -832 273 250 0 24 chr20 64414400 64414484 -7739398 - MER94 DNA DNA -43 91 10 250 359 51 0 chr20 64414485 64414602 -7739280 + L2 LINE L2 2507 2629 -685 1645 220 51 12 chr20 64414667 64415081 -7738801 - MLT1C LTR MaLR -37 430 1 576 314 73 4 chr20 64415089 64415350 -7738532 + L2 LINE L2 2699 2977 -337 367 341 41 5 chr20 64415562 64415734 -7738148 - MIR SINE MIR -62 146 23 1717 218 58 55 chr20 64415961 64416593 -7737289 + L1MC4 LINE L1 7248 7881 -161 308 293 24 0 chr20 64416595 64416718 -7737164 + L1MC4 LINE L1 7914 8039 -3 288 0 0 0 chr20 64417610 64417642 -7736240 + (T)n Simple_repeat Simple_repeat 1 32 0 576 321 82 8 chr20 64417968 64418211 -7735671 + MLT1K LTR MaLR 328 588 0 311 258 94 106 chr20 64418517 64418773 -7735109 + MLT1I LTR MaLR 39 291 -118 409 323 18 6 chr20 64419226 64419390 -7734492 + MER117 DNA MER1_type 1 166 -31 240 258 96 48 chr20 64421048 64421238 -7732644 - MIR SINE MIR -58 204 10 431 268 110 12 chr20 64421473 64421574 -7732308 + MER5A DNA MER1_type 10 134 -55 2152 121 0 13 chr20 64421574 64421887 -7731995 - AluSx SINE Alu -3 309 1 431 268 110 12 chr20 64421887 64421949 -7731933 + MER5A DNA MER1_type 134 189 0 479 293 98 14 chr20 64423052 64423267 -7730615 - MLT1J LTR MaLR -208 303 71 779 264 0 6 chr20 64423498 64423676 -7730206 - MER58B DNA MER1_type -1 340 164 21 0 0 0 chr20 64425265 64425286 -7728596 + AT_rich Low_complexity Low_complexity 1 21 0 2062 223 32 84 chr20 64425427 64425799 -7728083 + L1ME2 LINE L1 5324 5643 -521 182 88 0 29 chr20 64425799 64425833 -7728049 + (TA)n Simple_repeat Simple_repeat 1 33 0 2062 223 32 84 chr20 64425833 64426170 -7727712 + L1ME2 LINE L1 5643 5996 -168 251 304 96 22 chr20 64426882 64427017 -7726865 + MER20 DNA MER1_type 71 215 -4 2013 287 94 34 chr20 64427024 64427605 -7726277 + L2 LINE L2 2086 2631 -682 2055 110 46 0 chr20 64427605 64427886 -7725996 + AluSx SINE Alu 1 294 -18 2013 287 94 34 chr20 64427886 64428363 -7725519 + L2 LINE L2 2631 3221 -92 637 168 69 17 chr20 64429504 64429677 -7724205 + MER53 DNA DNA 8 189 0 559 307 24 0 chr20 64429761 64429927 -7723955 + MER96 DNA MER1_type? 1 170 -5 276 341 34 34 chr20 64430132 64430311 -7723571 - L2 LINE L2 0 3313 3135 189 300 45 36 chr20 64430403 64430513 -7723369 - L2 LINE L2 -336 2936 2826 1643 196 3 0 chr20 64430750 64431036 -7722846 + AluJo SINE Alu 5 291 -21 2028 133 77 11 chr20 64431673 64432025 -7721857 + THE1C LTR MaLR 1 375 0 1819 218 57 29 chr20 64432210 64432664 -7721218 + MLT1C LTR MaLR 1 467 0 236 260 135 0 chr20 64434028 64434124 -7719758 + L1MEc LINE L1 37 145 -6251 3368 229 66 4 chr20 64434124 64435034 -7718848 - L1 LINE L1 -796 5350 4385 2556 176 32 8 chr20 64435033 64435533 -7718349 + L1M3 LINE L1 5283 5794 -374 * 249 364 40 31 chr20 64435534 64435762 -7718120 + L1MEc LINE L1 387 616 -5780 25 31 0 0 chr20 64435887 64435919 -7717963 + AT_rich Low_complexity Low_complexity 1 32 0 25342 152 13 18 chr20 64435919 64441614 -7712268 - L1PA8A LINE L1 -12 6434 756 3738 212 59 52 chr20 64441639 64443048 -7710834 + L1PA13 LINE L1 1274 2717 -4080 3462 142 6 30 chr20 64443048 64443115 -7710767 + MER1A DNA MER1_type 1 68 -2634 3225 99 15 9 chr20 64443115 64443579 -7710303 + L1PA11 LINE L1 5708 6174 0 3462 142 6 30 chr20 64443579 64444053 -7709829 + MER1A DNA MER1_type 68 529 0 2300 200 57 0 chr20 64444053 64444581 -7709301 + L1PA13 LINE L1 2710 3260 -3537 592 137 0 26 chr20 64444602 64444719 -7709163 + L1PA15 LINE L1 6052 6165 0 267 364 0 8 chr20 64444921 64445039 -7708843 - MIR SINE MIR -66 196 80 730 167 0 23 chr20 64445150 64445309 -7708573 - FLAM_C SINE Alu 0 133 1 234 0 0 0 chr20 64445321 64445347 -7708535 + (T)n Simple_repeat Simple_repeat 1 26 0 411 315 76 66 chr20 64445387 64445837 -7708045 + L2 LINE L2 2790 3247 -66 22 35 0 0 chr20 64446237 64446266 -7707616 + AT_rich Low_complexity Low_complexity 1 29 0 184 229 33 82 chr20 64447127 64447188 -7706694 + MIR SINE MIR 23 80 -182 4367 212 66 27 chr20 64447255 64449318 -7704564 - L1MB7 LINE L1 -16 6168 4022 412 330 97 37 chr20 64449568 64450297 -7703585 - L2 LINE L2 -1 3312 2540 229 309 69 39 chr20 64451299 64451503 -7702379 + MLT1K LTR MaLR 379 588 0 182 302 19 19 chr20 64452297 64452350 -7701532 + L2 LINE L2 3242 3294 -19 27 0 0 0 chr20 64452433 64452460 -7701422 + AT_rich Low_complexity Low_complexity 1 27 0 201 167 0 0 chr20 64452734 64452770 -7701112 + (ATTG)n Simple_repeat Simple_repeat 1 36 0 257 359 72 19 chr20 64454426 64454635 -7699247 + L3 LINE CR1 488 707 -870 787 261 58 23 chr20 64454691 64454948 -7698934 - L2 LINE L2 0 3313 3048 233 219 12 98 chr20 64454952 64455034 -7698848 + L3 LINE CR1 1326 1400 -177 266 269 106 19 chr20 64455494 64455598 -7698284 + MIR SINE MIR 125 237 -25 1253 263 91 39 chr20 64455599 64456113 -7697769 + MLT1H LTR MaLR 1 541 -8 2043 92 31 41 chr20 64456763 64457056 -7696826 + AluSc SINE Alu 1 290 -19 234 292 21 10 chr20 64457207 64457303 -7696579 - LTR67 LTR ERVL -2 555 459 345 125 0 0 chr20 64457683 64457739 -7696143 + (CA)n Simple_repeat Simple_repeat 1 56 0 2088 120 3 13 chr20 64458621 64458920 -7694962 + AluSx SINE Alu 1 296 -16 362 339 38 15 chr20 64458996 64459140 -7694742 + MIR SINE MIR 7 153 -72 701 292 131 30 chr20 64459788 64460086 -7693796 + L2 LINE L2 2296 2623 -691 1960 126 0 11 chr20 64460107 64460416 -7693466 + AluSx SINE Alu 1 306 0 651 271 19 7 chr20 64460433 64460588 -7693294 - MIR SINE MIR -30 232 76 582 293 122 41 chr20 64460581 64460630 -7693252 + L2 LINE L2 2630 2674 -639 * 2521 60 0 0 chr20 64460630 64460931 -7692951 - AluY SINE Alu -10 301 1 582 293 122 41 chr20 64460931 64461416 -7692466 + L2 LINE L2 2674 3295 -18 840 239 155 22 chr20 64461589 64461911 -7691971 + MLT1A1 LTR MaLR 1 365 0 25 31 0 0 chr20 64462651 64462683 -7691199 + AT_rich Low_complexity Low_complexity 1 32 0 1544 156 112 7 chr20 64462723 64462999 -7690883 - AluSg1 SINE Alu -4 305 1 612 158 133 26 chr20 64464509 64464721 -7689161 - L1ME LINE L1 -669 5495 5265 518 258 48 43 chr20 64464723 64464909 -7688973 + MLT1A2 LTR MaLR 1 187 -187 837 305 24 12 chr20 64464999 64465419 -7688463 - L1MDa LINE L1 -2499 4041 3617 623 262 58 58 chr20 64465423 64465751 -7688131 - L1MDa LINE L1 -4198 2342 2015 844 290 40 40 chr20 64466096 64466492 -7687390 - L1MDa LINE L1 -6124 416 21 763 260 96 35 chr20 64466518 64466914 -7686968 - L1MC5 LINE L1 -466 7495 7076 654 292 65 4 chr20 64466923 64467200 -7686682 - L1MC5 LINE L1 -1974 5834 5541 357 125 0 0 chr20 64468140 64468196 -7685686 + (TG)n Simple_repeat Simple_repeat 2 57 0 1450 219 67 77 chr20 64468215 64468773 -7685109 - MLT1E2 LTR MaLR -37 589 69 203 333 0 30 chr20 64468923 64468989 -7684893 - L2 LINE L2 0 3313 3250 17289 49 2 1 chr20 64469082 64472902 -7680980 + L1PA5 LINE L1 2326 6154 0 1117 314 96 30 chr20 64472902 64473683 -7680199 - L2 LINE L2 -79 3234 2419 1058 261 40 51 chr20 64473765 64474137 -7679745 + LTR16A LTR ERVL 83 450 0 354 256 0 11 chr20 64474137 64474227 -7679655 - L2 LINE L2 -888 2426 2338 265 265 15 0 chr20 64474239 64474307 -7679575 - MIR SINE MIR 0 262 194 250 243 14 0 chr20 64474587 64474657 -7679225 + (TGAA)n Simple_repeat Simple_repeat 1 71 0 521 270 72 0 chr20 64475011 64475163 -7678719 - MER3 DNA MER1_type -1 208 46 767 159 0 36 chr20 64475194 64475332 -7678550 - FLAM_C SINE Alu 0 133 1 261 217 0 33 chr20 64475339 64475399 -7678483 - MER3 DNA MER1_type -150 59 2 260 156 22 0 chr20 64475457 64475502 -7678380 - MLT1K LTR MaLR 0 588 543 238 239 30 30 chr20 64475502 64475524 -7678358 - LTR67 LTR ERVL 0 557 491 513 242 97 67 chr20 64476086 64476355 -7677527 - LTR33 LTR ERVL -60 461 185 31 0 0 0 chr20 64476661 64476692 -7677190 + AT_rich Low_complexity Low_complexity 1 31 0 25 75 0 0 chr20 64477468 64477521 -7676361 + AT_rich Low_complexity Low_complexity 1 53 0 584 288 119 102 chr20 64477738 64478460 -7675422 + L2 LINE L2 2244 2977 -337 323 260 58 58 chr20 64478628 64478782 -7675100 + MIR SINE MIR 88 241 -21 2392 159 42 31 chr20 64479472 64479925 -7673957 + MER66B LTR ERV1 29 486 0 1192 244 122 0 chr20 64479925 64480266 -7673616 + LTR16A1 LTR ERVL 44 426 -31 201 328 15 0 chr20 64481382 64481449 -7672433 + MIR SINE MIR 192 259 -3 389 299 103 8 chr20 64481464 64481581 -7672301 + L2 LINE L2 3186 3313 0 186 316 51 41 chr20 64482227 64482325 -7671557 - L3 LINE CR1 -530 1047 949 526 184 37 105 chr20 64482568 64482701 -7671181 + L1MD1 LINE L1 5907 6025 -217 1622 188 3 16 chr20 64482701 64483009 -7670873 + AluJb SINE Alu 3 306 -6 526 184 37 105 chr20 64483009 64483065 -7670817 + L1MD1 LINE L1 6025 6083 -159 192 281 112 112 chr20 64483683 64483879 -7670003 + MIR SINE MIR 23 218 -44 292 308 60 20 chr20 64484035 64484195 -7669687 - MIR SINE MIR -49 213 46 233 241 35 0 chr20 64484278 64484336 -7669546 + GA-rich Low_complexity Low_complexity 5 64 0 250 328 133 26 chr20 64486999 64487194 -7666688 + L1ME3A LINE L1 5530 5745 -2063 320 163 288 0 chr20 64487277 64487357 -7666525 - MER58 DNA MER1_type 0 2420 2318 24 32 0 0 chr20 64487357 64487388 -7666494 + AT_rich Low_complexity Low_complexity 1 31 0 237 304 0 0 chr20 64487451 64487507 -7666375 - MER58 DNA MER1_type -159 56 1 355 259 0 44 chr20 64487520 64487655 -7666227 + L1ME3A LINE L1 5838 5966 -204 29 0 0 0 chr20 64488257 64488286 -7665596 + AT_rich Low_complexity Low_complexity 1 29 0 398 296 160 0 chr20 64489113 64489319 -7664563 - MER102a DNA MER1_type 0 330 92 422 315 34 0 chr20 64489686 64489832 -7664050 - L2 LINE L2 0 3313 3163 1536 68 45 0 chr20 64489948 64490169 -7663713 + L1MA1 LINE L1 6072 6302 0 337 315 20 20 chr20 64490402 64490548 -7663334 - MIR SINE MIR -41 221 76 263 307 0 27 chr20 64490934 64491009 -7662873 - MER5A DNA MER1_type -110 79 7 334 0 21 21 chr20 64491157 64491204 -7662678 + (CA)n Simple_repeat Simple_repeat 2 48 0 1774 133 28 25 chr20 64491246 64491532 -7662350 + AluSx SINE Alu 11 297 -15 981 232 35 72 chr20 64491586 64491718 -7662164 - MER87 LTR ERV1 -36 505 370 1852 170 0 0 chr20 64491718 64492035 -7661847 - AluSx SINE Alu 0 312 6 981 232 35 72 chr20 64492035 64492247 -7661635 - MER87 LTR ERV1 -171 370 174 22 0 0 0 chr20 64492375 64492397 -7661485 + AT_rich Low_complexity Low_complexity 1 22 0 375 276 123 12 chr20 64492977 64493140 -7660742 - MLT1K LTR MaLR -7 581 401 201 162 0 0 chr20 64493777 64493814 -7660068 + (TTCA)n Simple_repeat Simple_repeat 3 39 0 357 24 0 0 chr20 64494819 64494861 -7659021 + (TG)n Simple_repeat Simple_repeat 1 42 0 762 206 0 0 chr20 64495800 64496026 -7657856 + (TG)n Simple_repeat Simple_repeat 1 226 0 2055 86 50 4 chr20 64496682 64496960 -7656922 - AluSg SINE Alu -19 291 1 754 131 7 36 chr20 64497107 64497244 -7656638 - MLT1C LTR MaLR -334 133 1 388 378 0 0 chr20 64497302 64497421 -7656461 - MIR SINE MIR -117 145 27 410 315 39 8 chr20 64498754 64498881 -7655001 - L2 LINE L2 0 3313 3183 517 188 11 145 chr20 64498941 64499127 -7654755 + MER20 DNA MER1_type 14 174 -45 23 54 0 0 chr20 64499133 64499170 -7654712 + AT_rich Low_complexity Low_complexity 1 37 0 242 94 0 0 chr20 64499170 64499202 -7654680 + MER20 DNA MER1_type 184 215 -4 197 267 69 84 chr20 64500584 64500715 -7653167 + MIR SINE MIR 84 212 -50 6718 53 6 1 chr20 64502196 64503041 -7650841 - L1PA7 LINE L1 0 6154 5306 995 148 35 25 chr20 64503041 64503244 -7650638 + MER65A LTR ERV1 241 445 0 193 310 136 58 chr20 64503400 64503555 -7650327 - L2 LINE L2 -583 2731 2565 2022 141 3 3 chr20 64504894 64505192 -7648690 - AluSx SINE Alu -14 298 1 253 314 12 0 chr20 64505328 64505414 -7648468 + CT-rich Low_complexity Low_complexity 1 87 0 306 333 73 0 chr20 64505906 64506029 -7647853 - L2 LINE L2 -2 3311 3180 370 316 29 29 chr20 64506107 64506246 -7647636 - L2 LINE L2 0 3272 3134 255 321 19 9 chr20 64506375 64506481 -7647401 - L2 LINE L2 -49 3264 3158 230 345 29 22 chr20 64506493 64506632 -7647250 - MIR SINE MIR -4 258 119 230 296 98 23 chr20 64506638 64506770 -7647112 + L2 LINE L2 2684 2825 -489 232 234 47 16 chr20 64507941 64508005 -7645877 + L1ME1 LINE L1 38 103 -6293 2324 222 96 58 chr20 64508121 64508623 -7645259 + L1ME1 LINE L1 5192 5674 -561 333 120 0 20 chr20 64508623 64508673 -7645209 + MSTA LTR MaLR 321 369 -59 2324 222 96 58 chr20 64508673 64509143 -7644739 + L1ME1 LINE L1 5674 6234 -1 28 0 0 0 chr20 64510503 64510531 -7643351 + AT_rich Low_complexity Low_complexity 1 28 0 923 38 0 0 chr20 64510531 64510637 -7643245 - AluY SINE Alu -24 287 182 21 0 0 0 chr20 64511574 64511595 -7642287 + AT_rich Low_complexity Low_complexity 1 21 0 2131 137 114 5 chr20 64511732 64512118 -7641764 - MSTA LTR MaLR 0 428 1 2414 100 50 8 chr20 64512140 64512500 -7641382 + THE1C LTR MaLR 1 375 0 246 337 0 0 chr20 64512584 64512667 -7641215 + (CA)n Simple_repeat Simple_repeat 2 84 0 785 259 85 9 chr20 64514147 64514475 -7639407 + L1MC4 LINE L1 7688 8040 -2 21 71 0 0 chr20 64515073 64515115 -7638767 + AT_rich Low_complexity Low_complexity 1 42 0 1288 175 4 72 chr20 64515951 64516214 -7637668 + AluJo SINE Alu 38 282 -30 1148 179 84 49 chr20 64516903 64516928 -7636954 - MER33 DNA MER1_type -2266 319 296 2184 128 3 0 chr20 64516928 64517240 -7636642 + AluSq SINE Alu 1 313 0 1148 179 84 49 chr20 64517240 64517397 -7636485 - MER33 DNA MER1_type -2289 296 119 1986 141 6 28 chr20 64517397 64517716 -7636166 - AluSx SINE Alu 0 312 1 1148 179 84 49 chr20 64517716 64517840 -7636042 - MER33 DNA MER1_type -2466 119 1 193 330 34 11 chr20 64517945 64518033 -7635849 + MIR3 SINE MIR 117 206 -2 280 337 45 40 chr20 64518636 64518786 -7635096 - MIR3 SINE MIR -47 161 6 460 205 25 140 chr20 64518854 64519054 -7634828 + MER5B DNA MER1_type 1 177 -1 275 256 13 13 chr20 64519652 64519730 -7634152 - MLT1J LTR MaLR -334 177 100 265 311 0 66 chr20 64519979 64520085 -7633797 + L2 LINE L2 3174 3272 0 183 325 135 8 chr20 64520985 64521111 -7632771 + MIR SINE MIR 57 198 -64 258 263 53 0 chr20 64521157 64521233 -7632649 + L2 LINE L2 2716 2795 -519 302 272 124 87 chr20 64521316 64521581 -7632301 + L2 LINE L2 2951 3225 -88 1631 132 45 15 chr20 64522453 64522719 -7631163 + AluSg SINE Alu 1 274 -36 581 273 32 0 chr20 64522938 64523092 -7630790 - MIR SINE MIR -19 243 85 275 306 97 36 chr20 64523291 64523487 -7630395 - MIR SINE MIR -8 254 47 2096 132 19 43 chr20 64523929 64524299 -7629583 - THE1C LTR MaLR 0 375 15 543 256 97 101 chr20 64524743 64525197 -7628685 - MLT1H1 LTR MaLR 0 555 104 5874 171 87 136 chr20 64525460 64526030 -7627852 - L1MC3 LINE L1 -2 7783 7187 2159 113 0 3 chr20 64526030 64526321 -7627561 - AluSx SINE Alu -22 290 1 5874 171 87 136 chr20 64526321 64526436 -7627446 - L1MC3 LINE L1 -598 7187 7068 356 268 0 0 chr20 64526436 64526518 -7627364 - MLT1H1 LTR MaLR -442 125 44 5874 171 87 136 chr20 64526518 64527748 -7626134 - L1MC3 LINE L1 -717 7068 5884 2702 228 42 51 chr20 64527917 64529117 -7624765 + L1ME1 LINE L1 4767 5960 -206 1911 84 0 15 chr20 64529117 64529399 -7624483 + AluY SINE Alu 28 305 0 2702 228 42 51 chr20 64529399 64529539 -7624343 + L1ME1 LINE L1 5960 6100 -66 1067 112 0 7 chr20 64529972 64530124 -7623758 - MER1A DNA MER1_type 0 529 379 229 287 12 30 chr20 64530128 64530184 -7623698 + (TATAA)n Simple_repeat Simple_repeat 1 56 -108 189 94 0 0 chr20 64530184 64530216 -7623666 + (TTATA)n Simple_repeat Simple_repeat 1 32 0 229 287 12 30 chr20 64530216 64530326 -7623556 + (TATAA)n Simple_repeat Simple_repeat 56 164 0 192 179 30 60 chr20 64530355 64530489 -7623393 + (TATAA)n Simple_repeat Simple_repeat 2 131 0 311 219 38 19 chr20 64530507 64530612 -7623270 + (TATAA)n Simple_repeat Simple_repeat 4 110 0 2841 116 15 2 chr20 64530613 64531010 -7622872 - MER1A DNA MER1_type -127 402 1 23 33 0 0 chr20 64532280 64532310 -7621572 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr20 64532850 64532872 -7621010 + AT_rich Low_complexity Low_complexity 1 22 0 339 256 8 16 chr20 64533594 64533723 -7620159 + (TA)n Simple_repeat Simple_repeat 1 128 0 197 146 21 0 chr20 64533732 64533780 -7620102 + (TATG)n Simple_repeat Simple_repeat 2 50 0 489 370 76 9 chr20 64534166 64534377 -7619505 - MIR SINE MIR -35 227 3 291 310 117 7 chr20 64534660 64534805 -7619077 - MIR SINE MIR -4 258 98 591 292 86 34 chr20 64534980 64535213 -7618669 + MIR SINE MIR 10 254 -8 201 39 0 0 chr20 64535319 64535345 -7618537 + (A)n Simple_repeat Simple_repeat 1 26 0 225 282 35 12 chr20 64535980 64536065 -7617817 - MLT1I LTR MaLR -4 405 319 222 383 11 0 chr20 64536343 64536437 -7617445 + L2 LINE L2 2857 2951 -362 261 322 0 23 chr20 64536533 64536620 -7617262 - L3 LINE CR1 -71 1506 1422 969 185 0 0 chr20 64536819 64536981 -7616901 + AluSg/x SINE Alu 138 299 -13 456 324 100 34 chr20 64537081 64537594 -7616288 - L3 LINE CR1 -155 1422 803 781 206 94 6 chr20 64538224 64538384 -7615498 - MER58B DNA MER1_type 0 341 168 1289 7 0 0 chr20 64538458 64538601 -7615281 + AluY SINE Alu 169 311 0 261 0 0 0 chr20 64538604 64538633 -7615249 + (TA)n Simple_repeat Simple_repeat 1 29 0 215 286 71 0 chr20 64538641 64538697 -7615185 + MIR SINE MIR 33 92 -170 33 43 0 0 chr20 64538896 64538943 -7614939 + AT_rich Low_complexity Low_complexity 1 47 0 557 313 43 21 chr20 64539120 64539449 -7614433 + L1ME4a LINE L1 5493 5828 -293 23 92 0 0 chr20 64539479 64539544 -7614338 + AT_rich Low_complexity Low_complexity 1 65 0 273 331 125 43 chr20 64539861 64540081 -7613801 + L2 LINE L2 3010 3259 -54 2594 115 5 3 chr20 64540081 64540455 -7613427 - THE1C LTR MaLR 0 375 1 273 331 125 43 chr20 64540455 64540515 -7613367 + L2 LINE L2 3259 3313 0 211 339 68 25 chr20 64540711 64540829 -7613053 + MER5B DNA MER1_type 27 149 -29 324 0 0 0 chr20 64542144 64542180 -7611702 + (CA)n Simple_repeat Simple_repeat 2 37 0 287 245 20 68 chr20 64543753 64543900 -7609982 + L1M4 LINE L1 85 224 -6318 812 252 97 29 chr20 64544601 64544839 -7609043 + HERV16 LTR ERVL 1688 1941 -3055 1032 254 131 0 chr20 64544839 64545130 -7608752 + LTR16A LTR ERVL 113 441 -9 25 31 0 0 chr20 64546540 64546572 -7607310 + AT_rich Low_complexity Low_complexity 1 32 0 543 259 85 42 chr20 64546947 64547136 -7606746 - MIR SINE MIR -55 207 11 209 357 0 12 chr20 64547429 64547513 -7606369 - MIR SINE MIR 0 262 180 238 241 130 9 chr20 64547737 64547845 -7606037 + L2 LINE L2 2348 2468 -846 696 291 131 5 chr20 64548649 64549031 -7604851 - LTR33 LTR ERVL -83 438 9 232 196 54 0 chr20 64549325 64549381 -7604501 - L1MA9 LINE L1 0 6312 6254 * 962 178 0 17 chr20 64549372 64549552 -7604330 + L1M2 LINE L1 5553 5729 -583 334 189 23 45 chr20 64549924 64550056 -7603826 + (TA)n Simple_repeat Simple_repeat 1 129 0 2487 80 0 0 chr20 64550679 64550980 -7602902 + AluSx SINE Alu 1 301 -11 383 242 42 0 chr20 64551042 64551137 -7602745 + MLT1J2 LTR MaLR 65 163 -287 394 233 93 53 chr20 64551164 64551314 -7602568 + MLT1J2 LTR MaLR 249 404 -46 2279 256 59 30 chr20 64551916 64552684 -7601198 + L2 LINE L2 1706 2495 -819 207 100 0 0 chr20 64552700 64552730 -7601152 + (A)n Simple_repeat Simple_repeat 1 30 0 194 205 0 0 chr20 64552730 64552769 -7601113 + L2 LINE L2 2508 2546 -768 2240 59 17 10 chr20 64552771 64553059 -7600823 + AluY SINE Alu 1 290 -21 475 241 38 93 chr20 64553088 64553324 -7600558 + L2 LINE L2 3091 3313 0 1032 192 136 14 chr20 64553623 64553910 -7599972 - MER5C DNA MER1_type 0 324 3 659 183 42 0 chr20 64554044 64554164 -7599718 + FLAM_C SINE Alu 14 138 -5 227 175 0 0 chr20 64555380 64555420 -7598462 - L2 LINE L2 -1 3312 3273 235 297 55 28 chr20 64555948 64556093 -7597789 + MLT1J2 LTR MaLR 264 412 -38 311 133 0 17 chr20 64556968 64557028 -7596854 + (ATG)n Simple_repeat Simple_repeat 2 60 0 233 106 30 30 chr20 64557072 64557138 -7596744 + (TA)n Simple_repeat Simple_repeat 2 67 0 451 274 89 36 chr20 64557161 64557329 -7596553 - MIR SINE MIR -66 196 20 413 338 7 7 chr20 64557706 64557848 -7596034 - L2 LINE L2 -2 3311 3170 2439 87 0 6 chr20 64557958 64558270 -7595612 + AluY SINE Alu 2 311 0 235 45 68 0 chr20 64558276 64558320 -7595562 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 1251 185 38 65 chr20 64559517 64559836 -7594046 - AluJb SINE Alu 0 311 1 1074 195 62 74 chr20 64559898 64560288 -7593594 + MER58D DNA MER1_type 2 386 0 25 0 0 0 chr20 64560344 64560369 -7593513 + AT_rich Low_complexity Low_complexity 1 25 0 295 360 34 27 chr20 64561134 64561281 -7592601 + MER5A DNA MER1_type 37 184 -5 216 216 0 0 chr20 64561362 64561413 -7592469 + (CATATA)n Simple_repeat Simple_repeat 2 52 0 514 310 48 48 chr20 64561471 64561742 -7592140 - L2 LINE L2 -5 3308 3038 3996 255 33 47 chr20 64561790 64563617 -7590265 - L1MC4a LINE L1 -830 5316 4733 544 314 92 59 chr20 64564144 64564765 -7589117 + L2 LINE L2 2420 3082 -190 415 297 18 53 chr20 64565592 64565829 -7588053 + MIR SINE MIR 30 262 0 264 269 128 0 chr20 64565977 64566055 -7587827 + MIR SINE MIR 63 150 -112 202 194 0 0 chr20 64566149 64566185 -7587697 - L2 LINE L2 0 3272 3237 309 279 37 15 chr20 64566397 64566533 -7587349 + L1MC/D LINE L1 5699 5837 -1971 220 309 158 18 chr20 64566588 64566753 -7587129 + MIR SINE MIR 39 226 -36 434 269 25 17 chr20 64568141 64568260 -7585622 + MIR SINE MIR 30 149 -113 187 300 83 0 chr20 64568791 64568851 -7585031 + L2 LINE L2 3137 3201 -71 368 236 28 0 chr20 64569903 64569975 -7583907 + MER81 DNA DNA 41 114 0 2464 64 0 0 chr20 64570961 64571256 -7582626 - AluY SINE Alu -13 298 4 638 310 174 25 chr20 64571672 64572040 -7581842 - L2 LINE L2 -7 3306 2884 251 260 10 60 chr20 64572034 64572134 -7581748 - L2 LINE L2 -706 2608 2514 * 275 372 55 30 chr20 64572333 64572497 -7581385 - L2 LINE L2 -1 3271 3104 248 349 9 9 chr20 64572798 64572907 -7580975 - MER5A DNA MER1_type -44 145 37 1693 206 34 81 chr20 64573235 64573729 -7580153 - MLT1D LTR MaLR 0 505 35 804 167 15 0 chr20 64574887 64575019 -7578863 + MLT2B2 LTR ERVL 1 134 -381 379 271 107 65 chr20 64575059 64575519 -7578363 - HAL1b LINE L1 0 1348 846 2662 17 0 0 chr20 64575519 64575814 -7578068 + AluYb8 SINE Alu 22 316 -2 379 271 107 65 chr20 64575814 64576061 -7577821 - HAL1b LINE L1 -502 846 611 213 358 37 0 chr20 64576362 64576443 -7577439 - L2 LINE L2 -2 3270 3187 492 264 0 0 chr20 64576641 64576747 -7577135 - MER20 DNA MER1_type -24 195 90 687 301 48 13 chr20 64577603 64577832 -7576050 - MIR SINE MIR -13 249 13 183 156 0 0 chr20 64577894 64577926 -7575956 + (CATATA)n Simple_repeat Simple_repeat 4 35 0 1529 118 61 39 chr20 64577926 64578206 -7575676 + MER7A DNA MER2_type 63 346 0 3877 240 86 47 chr20 64578557 64579828 -7574054 - L1MD1 LINE L1 -6 6630 5410 290 0 80 0 chr20 64579828 64579878 -7574004 + T-rich Low_complexity Low_complexity 2 55 0 3345 5 13 0 chr20 64579878 64580259 -7573623 - L1PA2 LINE L1 -10 6145 5760 3877 240 86 47 chr20 64580259 64580530 -7573352 - L1MD1 LINE L1 -1226 5410 5151 1863 168 36 33 chr20 64580530 64580893 -7572989 - THE1B LTR MaLR 0 364 1 3877 240 86 47 chr20 64580893 64581089 -7572793 - L1MD1 LINE L1 -1485 5151 4964 2190 125 3 0 chr20 64581089 64581400 -7572482 + AluSx SINE Alu 1 312 0 3877 240 86 47 chr20 64581400 64581751 -7572131 - L1MD1 LINE L1 -1672 4964 4628 2141 130 3 0 chr20 64581751 64582052 -7571830 - AluSc SINE Alu -7 302 1 3877 240 86 47 chr20 64582052 64582787 -7571095 - L1MD1 LINE L1 -2008 4628 3701 1248 219 10 72 chr20 64582783 64583281 -7570601 - L1MD1 LINE L1 -3250 3290 2824 * 19867 170 29 12 chr20 64583292 64585077 -7568805 + L1MA3 LINE L1 12 1765 -5800 2240 111 0 3 chr20 64585077 64585383 -7568499 + AluSg SINE Alu 1 305 -5 19867 170 29 12 chr20 64585383 64587146 -7566736 + L1MA3 LINE L1 1765 3621 -3944 11896 183 14 13 chr20 64587151 64588049 -7565833 + L1MA3 LINE L1 4204 5100 -2624 419 0 20 0 chr20 64588049 64588100 -7565782 + (TAGA)n Simple_repeat Simple_repeat 2 53 0 11896 183 14 13 chr20 64588100 64589825 -7564057 + L1MA3 LINE L1 5100 7001 -723 1593 168 60 46 chr20 64589825 64590195 -7563687 + THE1C LTR MaLR 1 375 0 11896 183 14 13 chr20 64590195 64590819 -7563063 + L1MA3 LINE L1 7001 7623 -101 4024 206 85 35 chr20 64590868 64590917 -7562965 - L1MD1 LINE L1 -3873 2848 2803 2035 132 156 5 chr20 64590917 64591289 -7562593 - MSTA LTR MaLR 0 428 1 4024 206 85 35 chr20 64591289 64592619 -7561263 - L1MD1 LINE L1 -3918 2803 1362 4366 250 59 16 chr20 64592625 64592927 -7560955 - L1MD1 LINE L1 -5252 1288 1001 188 33 0 33 chr20 64592927 64592957 -7560925 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 4366 250 59 16 chr20 64592957 64593631 -7560251 - L1MD1 LINE L1 -5539 1001 246 216 97 0 0 chr20 64593631 64593662 -7560220 + (TG)n Simple_repeat Simple_repeat 1 31 0 4366 250 59 16 chr20 64593662 64593902 -7559980 - L1MD1 LINE L1 -6294 246 18 722 312 126 23 chr20 64593957 64594435 -7559447 + MLT1L LTR MaLR 16 542 -73 183 189 0 0 chr20 64594642 64594679 -7559203 - MIR SINE MIR -10 252 216 3073 188 17 57 chr20 64594687 64595143 -7558739 - L1MC2 LINE L1 -1 7765 7292 2139 164 76 0 chr20 64595143 64595539 -7558343 - MSTB LTR MaLR 0 426 1 3073 188 17 57 chr20 64595539 64595828 -7558054 - L1MC2 LINE L1 -474 7292 6142 310 258 204 0 chr20 64595832 64595964 -7557918 - MIR SINE MIR -31 231 73 423 0 0 0 chr20 64596104 64596151 -7557731 + (CA)n Simple_repeat Simple_repeat 1 47 0 243 316 32 11 chr20 64597009 64597104 -7556778 - MER5B DNA MER1_type -1 177 81 26 30 0 0 chr20 64597266 64597299 -7556583 + AT_rich Low_complexity Low_complexity 1 33 0 339 239 14 0 chr20 64597343 64597414 -7556468 + L2 LINE L2 3237 3308 -5 301 398 18 0 chr20 64597815 64597928 -7555954 + L2 LINE L2 3145 3259 -13 564 282 28 28 chr20 64598518 64598699 -7555183 - MIR SINE MIR -75 187 7 557 315 98 58 chr20 64600128 64600607 -7553275 - MLT1J LTR MaLR -2 509 12 3830 80 4 0 chr20 64600868 64601381 -7552501 + L1PA10 LINE L1 5654 6168 0 224 339 0 0 chr20 64601904 64601966 -7551916 + L2 LINE L2 3230 3291 -22 21 0 0 0 chr20 64602077 64602098 -7551784 + AT_rich Low_complexity Low_complexity 1 21 0 238 320 177 27 chr20 64602437 64602584 -7551298 - L2 LINE L2 0 3272 3104 2172 101 3 0 chr20 64603282 64603568 -7550314 - AluSx SINE Alu -25 287 1 303 315 82 47 chr20 64603620 64603899 -7549983 - L2 LINE L2 0 3313 3025 2122 124 0 19 chr20 64604891 64605206 -7548676 - AluSx SINE Alu -3 309 1 491 349 138 7 chr20 64605926 64606224 -7547658 + L2 LINE L2 2972 3308 -5 2114 259 70 58 chr20 64607211 64608328 -7545554 + L1MC4 LINE L1 6484 7739 -163 383 200 0 0 chr20 64608324 64608399 -7545483 + L1MC4 LINE L1 7963 8037 -5 * 552 294 53 84 chr20 64608684 64609078 -7544804 + L2 LINE L2 2931 3312 -1 273 75 0 0 chr20 64609177 64609217 -7544665 + (TGAA)n Simple_repeat Simple_repeat 4 43 0 208 371 59 53 chr20 64610512 64610559 -7543323 + MER5A DNA MER1_type 18 63 -126 10660 29 0 1 chr20 64610559 64612604 -7541278 + L1PA3 LINE L1 4112 6154 -1 208 371 59 53 chr20 64612604 64612726 -7541156 + MER5A DNA MER1_type 63 188 -1 327 331 48 21 chr20 64612784 64612929 -7540953 + MER5A DNA MER1_type 40 188 -1 831 258 90 16 chr20 64612979 64613223 -7540659 - MIR SINE MIR 0 262 1 333 149 27 54 chr20 64613734 64613808 -7540074 + MIR SINE MIR 191 262 0 188 349 30 45 chr20 64613887 64614019 -7539863 - MER5A DNA MER1_type -30 159 30 * 515 234 45 0 chr20 64613987 64614098 -7539784 - MIR SINE MIR -87 175 60 201 74 0 0 chr20 64614602 64614629 -7539253 + (TTC)n Simple_repeat Simple_repeat 1 27 0 231 156 22 22 chr20 64614743 64614788 -7539094 + MIR SINE MIR 104 148 -60 1541 252 149 21 chr20 64616070 64616634 -7537248 - MLT2F LTR ERVL 0 663 28 378 74 0 0 chr20 64617829 64617883 -7535999 + (TGGA)n Simple_repeat Simple_repeat 4 57 0 31 0 0 0 chr20 64618107 64618138 -7535744 + AT_rich Low_complexity Low_complexity 1 31 0 523 342 69 74 chr20 64619076 64619468 -7534414 - L2 LINE L2 -1 3271 2882 7222 162 18 26 chr20 64619471 64620897 -7532985 + L1MA8 LINE L1 3646 5060 -1086 3645 161 21 36 chr20 64620901 64621648 -7532234 + L1MA8 LINE L1 5492 6227 -64 287 280 34 8 chr20 64621648 64621766 -7532116 + (TA)n Simple_repeat Simple_repeat 1 121 0 693 238 67 21 chr20 64622032 64622225 -7531657 - MIR SINE MIR -54 208 7 264 312 118 0 chr20 64622223 64622316 -7531566 - MIR SINE MIR -156 106 3 * 318 355 75 22 chr20 64622324 64622642 -7531240 - L2 LINE L2 -586 2728 2394 297 293 86 45 chr20 64622779 64623001 -7530881 - L2 LINE L2 -954 2360 2130 574 271 16 32 chr20 64624926 64625114 -7528768 - L1ME2 LINE L1 -19 6145 5961 2083 241 126 58 chr20 64625120 64625562 -7528320 - L1ME2 LINE L1 -336 5828 5418 405 0 0 0 chr20 64625562 64625607 -7528275 + (TG)n Simple_repeat Simple_repeat 2 46 0 2083 241 126 58 chr20 64625607 64627032 -7526850 - L1ME2 LINE L1 -746 5418 3842 251 321 114 26 chr20 64627208 64627401 -7526481 - MIR SINE MIR 0 262 53 394 279 19 10 chr20 64628119 64628223 -7525659 - L2 LINE L2 0 3272 3168 222 339 89 24 chr20 64628376 64628500 -7525382 - MIR SINE MIR -117 145 14 550 316 117 53 chr20 64628675 64629225 -7524657 + L2 LINE L2 2734 3313 0 618 258 53 11 chr20 64630057 64630247 -7523635 - L1MD2 LINE L1 0 6359 6162 1424 190 56 16 chr20 64630257 64630578 -7523304 - MLT1C LTR MaLR 0 467 134 597 185 0 0 chr20 64630578 64630670 -7523212 + FRAM SINE Alu 52 143 -33 198 103 0 0 chr20 64630673 64630702 -7523180 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 9941 204 42 16 chr20 64630737 64634291 -7519591 + L1PA16 LINE L1 2525 6163 -3 495 285 172 0 chr20 64634544 64634695 -7519187 + MER5A DNA MER1_type 11 187 -2 313 239 0 0 chr20 64634930 64634997 -7518885 + MIR SINE MIR 170 236 -26 21 36 0 0 chr20 64635029 64635057 -7518825 + AT_rich Low_complexity Low_complexity 1 28 0 360 260 60 0 chr20 64635118 64635218 -7518664 + MER113 DNA MER1_type? 389 494 -27 1508 178 8 4 chr20 64635436 64635694 -7518188 + MER2 DNA MER2_type 2 260 -85 599 294 169 34 chr20 64635788 64635829 -7518053 + L1ME4a LINE L1 5492 5526 -595 2350 58 0 17 chr20 64635829 64636121 -7517761 - AluSc SINE Alu -22 287 1 599 294 169 34 chr20 64636121 64636631 -7517251 + L1ME4a LINE L1 5526 6117 -4 683 302 127 23 chr20 64636903 64637496 -7516386 + L2 LINE L2 2543 3213 -100 266 298 105 9 chr20 64637577 64637691 -7516191 - MLT1C LTR MaLR -451 144 20 396 252 95 41 chr20 64637768 64637915 -7515967 + L3 LINE CR1 1348 1502 -75 417 270 106 37 chr20 64638540 64638729 -7515153 + MIR SINE MIR 60 261 -1 21 36 0 0 chr20 64638983 64639011 -7514871 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr20 64639113 64639136 -7514746 + AT_rich Low_complexity Low_complexity 1 23 0 934 216 9 65 chr20 64639544 64639776 -7514106 - MER20 DNA MER1_type 0 219 1 23 0 0 0 chr20 64639941 64639964 -7513918 + AT_rich Low_complexity Low_complexity 1 23 0 850 320 128 50 chr20 64640780 64641443 -7512439 + L2 LINE L2 2224 2938 -376 278 265 68 17 chr20 64641527 64641644 -7512238 + L1MCc LINE L1 1232 1354 -5069 295 169 34 0 chr20 64641647 64641706 -7512176 + L1M4 LINE L1 4290 4350 -1796 237 233 12 81 chr20 64641723 64641809 -7512073 - MLT1K LTR MaLR -101 487 408 188 350 117 7 chr20 64642664 64642801 -7511081 + MIR3 SINE MIR 46 197 -11 291 326 145 44 chr20 64642951 64643178 -7510704 + L2 LINE L2 3020 3269 -3 203 264 11 103 chr20 64643198 64643255 -7510627 + L2 LINE L2 3193 3241 -31 2378 75 0 0 chr20 64643255 64643549 -7510333 + AluY SINE Alu 1 294 -17 203 264 11 103 chr20 64643549 64643578 -7510304 + L2 LINE L2 3241 3271 -1 219 238 0 0 chr20 64643901 64643943 -7509939 - MIR SINE MIR -102 106 65 911 158 21 117 chr20 64644576 64644816 -7509066 - MER20 DNA MER1_type -2 217 1 22 35 0 0 chr20 64645530 64645559 -7508323 + AT_rich Low_complexity Low_complexity 1 29 0 390 134 0 0 chr20 64645602 64645669 -7508213 + (GA)n Simple_repeat Simple_repeat 1 67 0 23 33 0 0 chr20 64646019 64646049 -7507833 + AT_rich Low_complexity Low_complexity 1 30 0 498 100 109 45 chr20 64646181 64646291 -7507591 - LTR40a LTR ERVL -23 496 380 23 33 0 0 chr20 64646639 64646669 -7507213 + AT_rich Low_complexity Low_complexity 1 30 0 746 241 0 18 chr20 64646673 64646843 -7507039 - AluJo SINE Alu -34 278 112 1832 158 3 0 chr20 64646917 64647201 -7506681 - AluSx SINE Alu -27 285 1 547 243 100 54 chr20 64647201 64647460 -7506422 - L1ME LINE L1 -5797 273 3 1108 279 50 39 chr20 64647848 64648407 -7505475 + MLT1E LTR MaLR 1 527 -66 362 299 10 0 chr20 64648917 64649014 -7504868 + MER5A DNA MER1_type 8 105 -84 329 281 12 0 chr20 64649437 64649519 -7504363 + MER5B DNA MER1_type 59 141 -37 510 242 211 0 chr20 64649614 64649775 -7504107 + MER58A DNA MER1_type 27 221 -3 824 227 70 0 chr20 64650186 64650358 -7503524 + MER5A DNA MER1_type 3 186 -3 187 30 30 30 chr20 64651000 64651033 -7502849 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 2043 197 84 41 chr20 64651180 64651894 -7501988 - L1M LINE L1 -743 5403 4673 4144 86 31 4 chr20 64651896 64652635 -7501247 + L1P3 LINE L1 4776 5531 -623 * 29820 115 15 37 chr20 64652608 64654797 -7499085 + L1PA7 LINE L1 10 2245 -4224 7769 33 6 3 chr20 64654797 64655670 -7498212 + L1PA4 LINE L1 4437 5310 -845 2924 9 0 0 chr20 64655670 64655987 -7497895 + AluYb8 SINE Alu 1 317 -1 7769 33 6 3 chr20 64655987 64656835 -7497047 + L1PA4 LINE L1 5310 6155 0 29820 115 15 37 chr20 64656835 64661112 -7492770 + L1PA7 LINE L1 2245 6464 -5 3711 208 71 6 chr20 64661125 64662100 -7491782 - L1 LINE L1 -1498 4648 3611 4119 166 28 67 chr20 64662107 64662489 -7491393 + L1MA10 LINE L1 5443 5838 -496 2518 7 0 0 chr20 64662489 64662762 -7491120 + AluYa5 SINE Alu 39 311 0 4119 166 28 67 chr20 64662762 64663305 -7490577 + L1MA10 LINE L1 5838 6332 -2 2242 98 0 0 chr20 64663447 64663732 -7490150 + AluSc SINE Alu 1 285 -24 707 272 63 5 chr20 64664978 64665184 -7488698 - MER20 DNA MER1_type -1 218 1 242 213 0 0 chr20 64665214 64665261 -7488621 + (TATG)n Simple_repeat Simple_repeat 1 47 0 2451 90 0 0 chr20 64665788 64666099 -7487783 - AluY SINE Alu 0 311 1 309 294 14 0 chr20 64666135 64666234 -7487648 - MIR SINE MIR -56 152 52 301 269 17 34 chr20 64666566 64666685 -7487197 - MER103 DNA DNA -47 119 3 2076 107 0 4 chr20 64667152 64667433 -7486449 - AluSp SINE Alu -12 301 22 428 306 102 57 chr20 64667586 64667969 -7485913 + MLT1J LTR MaLR 99 498 -13 3510 128 35 37 chr20 64668080 64668524 -7485358 - MER7C DNA MER2_type -2426 602 158 1902 127 18 7 chr20 64668524 64668807 -7485075 - AluSx SINE Alu -26 286 1 3510 128 35 37 chr20 64668807 64668961 -7484921 - MER7C DNA MER2_type -2870 158 5 497 217 76 32 chr20 64669007 64669164 -7484718 - L1MC4a LINE L1 -1936 5872 5709 282 210 16 0 chr20 64669235 64669297 -7484585 - MER96 DNA MER1_type? 0 175 113 2379 100 0 0 chr20 64669480 64669779 -7484103 - AluSq SINE Alu -14 299 1 2073 119 7 0 chr20 64670155 64670459 -7483423 - AluSc SINE Alu 0 306 1 232 233 0 50 chr20 64670706 64670766 -7483116 - HAL1 LINE L1 -1143 1364 1308 1099 188 26 26 chr20 64671354 64671620 -7482262 + L1MD3 LINE L1 7730 7995 0 432 0 0 0 chr20 64671716 64671764 -7482118 + (CA)n Simple_repeat Simple_repeat 2 49 0 645 231 0 0 chr20 64671809 64671939 -7481943 - FLAM_A SINE Alu -3 130 1 1684 198 103 71 chr20 64672046 64672648 -7481234 - MER74B LTR ERVL -1 621 1 272 309 99 25 chr20 64672817 64672979 -7480903 + MIR SINE MIR 87 260 -2 638 281 79 25 chr20 64673822 64674025 -7479857 + MIR SINE MIR 20 233 -29 201 267 198 20 chr20 64674326 64674427 -7479455 - MIR SINE MIR -10 252 134 29 28 0 0 chr20 64675594 64675630 -7478252 + AT_rich Low_complexity Low_complexity 1 36 0 1687 168 11 49 chr20 64675643 64676012 -7477870 - L1MA8 LINE L1 -34 6257 5903 683 311 107 17 chr20 64676592 64677117 -7476765 - L1ME4a LINE L1 -11 6110 5539 430 344 132 43 chr20 64677853 64678352 -7475530 + L2 LINE L2 2735 3267 -5 226 261 14 14 chr20 64678352 64678421 -7475461 + GA-rich Low_complexity Low_complexity 3 71 0 22 0 0 0 chr20 64679271 64679293 -7474589 + AT_rich Low_complexity Low_complexity 1 22 0 23 54 0 0 chr20 64680342 64680379 -7473503 + AT_rich Low_complexity Low_complexity 1 37 0 192 393 80 0 chr20 64680692 64680804 -7473078 - MIR SINE MIR -106 156 36 884 263 12 44 chr20 64681090 64681341 -7472541 - MIR SINE MIR -1 261 19 1846 144 18 0 chr20 64682425 64682728 -7471154 - AluSx SINE Alu 0 308 1 235 319 11 11 chr20 64683096 64683187 -7470695 + MIR SINE MIR 27 117 -145 274 317 9 16 chr20 64683298 64683448 -7470434 - L1ME LINE L1 -297 5824 5677 360 230 0 22 chr20 64684432 64684571 -7469311 + GA-rich Low_complexity Low_complexity 3 138 0 237 273 0 39 chr20 64684587 64684664 -7469218 + GA-rich Low_complexity Low_complexity 3 76 0 232 222 0 0 chr20 64685643 64685688 -7468194 - L2 LINE L2 -35 3237 3193 1067 276 49 70 chr20 64685804 64686235 -7467647 - MLT1H LTR MaLR -127 422 1 372 290 9 28 chr20 64686396 64686503 -7467379 - L2 LINE L2 -314 2999 2895 191 306 41 10 chr20 64686508 64686606 -7467276 - L2 LINE L2 -578 2736 2636 2467 239 68 17 chr20 64687202 64687951 -7465931 - Charlie1 DNA MER1_type -412 2349 1563 3721 187 49 55 chr20 64688138 64688689 -7465193 - MER21B LTR ERV1 -9 854 308 282 29 0 0 chr20 64688689 64688724 -7465158 + (TG)n Simple_repeat Simple_repeat 2 36 0 3721 187 49 55 chr20 64688724 64689031 -7464851 - MER21B LTR ERV1 -555 308 1 660 274 0 0 chr20 64689042 64689195 -7464687 + MER8 DNA MER2_type 27 179 -60 265 239 0 75 chr20 64689172 64689239 -7464643 + MER2 DNA MER2_type 284 345 0 * 331 233 0 14 chr20 64689248 64689321 -7464561 - Charlie1 DNA MER1_type -1204 1557 1486 228 320 31 10 chr20 64689486 64689583 -7464299 - MER117 DNA MER1_type -1 196 98 316 267 67 60 chr20 64689839 64689989 -7463893 - MER5B DNA MER1_type -27 151 1 329 374 67 0 chr20 64691662 64691841 -7462041 + MLT1K LTR MaLR 3 193 -395 210 253 222 0 chr20 64693893 64693992 -7459890 - MIR SINE MIR -10 252 132 308 293 43 21 chr20 64694280 64694420 -7459462 - L1M4 LINE L1 -2199 3947 3805 261 319 68 39 chr20 64694425 64694835 -7459047 - L1M4 LINE L1 -2367 3779 3358 2562 65 3 0 chr20 64694916 64695226 -7458656 - AluY SINE Alu 0 311 1 36 53 0 0 chr20 64695236 64695293 -7458589 + AT_rich Low_complexity Low_complexity 1 57 0 575 337 35 41 chr20 64695402 64695888 -7457994 - L1M4 LINE L1 -2993 3153 2671 292 252 152 20 chr20 64696067 64696218 -7457664 - MER113 DNA MER1_type? -14 507 337 259 301 135 37 chr20 64696487 64696650 -7457232 + LTR33 LTR ERVL 342 520 -1 289 328 25 5 chr20 64696687 64696891 -7456991 - MER113 DNA MER1_type? -313 208 1 395 278 130 25 chr20 64697680 64697842 -7456040 + MIR SINE MIR 84 262 0 390 233 33 17 chr20 64697947 64698067 -7455815 + MER33 DNA MER1_type 33 154 -170 679 249 81 15 chr20 64698553 64698750 -7455132 + MER20 DNA MER1_type 1 210 -9 3036 156 184 32 chr20 64698873 64699590 -7454292 + LTR1B LTR ERV1 1 826 0 242 250 17 75 chr20 64702493 64702613 -7451269 + LTR16C LTR ERVL 377 489 -2 232 28 131 28 chr20 64702762 64702869 -7451013 + (ATATG)n Simple_repeat Simple_repeat 3 120 0 2444 76 0 0 chr20 64702947 64703250 -7450632 - AluY SINE Alu -8 303 1 185 293 0 107 chr20 64703259 64703334 -7450548 - L2 LINE L2 -36 3236 3170 284 282 91 77 chr20 64703359 64703568 -7450314 + MLT1F LTR MaLR 109 320 -229 360 158 42 43 chr20 64703595 64703709 -7450173 + MLT1F LTR MaLR 433 542 0 394 276 100 8 chr20 64703710 64703865 -7450017 - MIR SINE MIR -61 147 34 425 300 87 13 chr20 64703927 64704077 -7449805 - L2 LINE L2 0 3272 3112 264 334 69 57 chr20 64705565 64705864 -7448018 - L2 LINE L2 -76 3196 2879 853 271 42 0 chr20 64705864 64706078 -7447804 - MER58A DNA MER1_type 0 224 2 264 334 69 57 chr20 64706078 64706162 -7447720 - L2 LINE L2 -393 2879 2798 512 60 33 71 chr20 64706928 64707112 -7446770 + (TA)n Simple_repeat Simple_repeat 1 177 0 201 129 0 0 chr20 64707142 64707173 -7446709 + (TG)n Simple_repeat Simple_repeat 2 32 0 2235 84 0 0 chr20 64707528 64707826 -7446056 - L1PA7 LINE L1 -5 6149 5852 386 368 0 12 chr20 64708037 64708200 -7445682 - MER5A DNA MER1_type -28 161 1 207 328 172 0 chr20 64708974 64709090 -7444792 - MIR SINE MIR -26 236 101 650 249 112 29 chr20 64710241 64710446 -7443436 - MIR SINE MIR -10 252 31 359 293 13 15 chr20 64710732 64710888 -7442994 + MLT1K LTR MaLR 42 232 -356 1992 150 32 68 chr20 64710909 64711349 -7442533 + MSTB1 LTR MaLR 9 432 0 343 246 95 134 chr20 64711403 64711635 -7442247 + MLT1K LTR MaLR 354 576 -12 372 332 32 33 chr20 64711671 64711890 -7441992 + MIR SINE MIR 3 219 -43 423 230 11 11 chr20 64712575 64712850 -7441032 + (TA)n Simple_repeat Simple_repeat 1 275 0 630 296 210 15 chr20 64713183 64713816 -7440066 + L2 LINE L2 2546 3313 0 422 305 70 37 chr20 64713948 64714135 -7439747 + MIR SINE MIR 48 240 -22 2074 138 3 3 chr20 64714631 64714943 -7438939 + AluSx SINE Alu 1 312 0 340 269 40 141 chr20 64715107 64715356 -7438526 + MIR SINE MIR 8 231 -31 25 0 0 0 chr20 64715374 64715399 -7438483 + AT_rich Low_complexity Low_complexity 1 25 0 2289 99 0 19 chr20 64715505 64715819 -7438063 + AluSg SINE Alu 2 309 -1 439 266 138 48 chr20 64715856 64716168 -7437714 + LTR50 LTR ERVL 449 788 -7 23 0 0 0 chr20 64716345 64716368 -7437514 + AT_rich Low_complexity Low_complexity 1 23 0 688 268 119 37 chr20 64716573 64716842 -7437040 - MLT1J1 LTR MaLR -108 338 48 194 326 11 33 chr20 64716945 64717037 -7436845 - L2 LINE L2 0 3313 3224 186 305 92 105 chr20 64717357 64717672 -7436210 + L2 LINE L2 2958 3268 -4 335 326 34 40 chr20 64718584 64718759 -7435123 - MIR SINE MIR -42 220 47 207 0 0 0 chr20 64720118 64720141 -7433741 + (TTA)n Simple_repeat Simple_repeat 3 25 0 3107 96 29 25 chr20 64720141 64720620 -7433262 - L1PA3 LINE L1 -18 6137 5657 451 19 0 0 chr20 64720620 64720673 -7433209 + L1P1 LINE L1 5721 5773 -382 351 0 0 0 chr20 64721276 64721315 -7432567 + (TG)n Simple_repeat Simple_repeat 2 40 0 2631 154 29 22 chr20 64721709 64722163 -7431719 + LTR32 LTR ERVL 15 471 0 365 136 0 0 chr20 64722310 64722369 -7431513 - L1MB4 LINE L1 -249 5931 5873 824 160 3 21 chr20 64722392 64722560 -7431322 - L1MB3 LINE L1 -211 5945 5781 3088 183 42 25 chr20 64722563 64723250 -7430632 + L1MB2 LINE L1 5465 6163 -8 1309 247 57 8 chr20 64723963 64724352 -7429530 + L1P LINE L1 2088 2495 -3651 462 183 0 0 chr20 64724356 64724438 -7429444 + AluJo SINE Alu 46 127 -185 206 95 24 0 chr20 64724438 64724480 -7429402 + (TA)n Simple_repeat Simple_repeat 2 44 0 321 182 61 0 chr20 64724481 64724547 -7429335 + L1MCa LINE L1 1995 2064 -4362 396 0 0 0 chr20 64724558 64724602 -7429280 + (CA)n Simple_repeat Simple_repeat 2 45 0 616 208 0 0 chr20 64724604 64724705 -7429177 + AluJo SINE Alu 137 237 -75 183 42 0 0 chr20 64725277 64725301 -7428581 + (TC)n Simple_repeat Simple_repeat 2 25 0 * 228 35 0 0 chr20 64725300 64725329 -7428553 + (TG)n Simple_repeat Simple_repeat 2 30 0 279 79 0 0 chr20 64725375 64725413 -7428469 + (TG)n Simple_repeat Simple_repeat 2 39 0 2231 92 0 14 chr20 64725424 64725719 -7428163 - AluSg1 SINE Alu -18 291 1 22 35 0 0 chr20 64726106 64726135 -7427747 + AT_rich Low_complexity Low_complexity 1 29 0 2580 42 0 3 chr20 64726191 64726497 -7427385 + AluY SINE Alu 1 305 -6 678 191 76 0 chr20 64726713 64726870 -7427012 - MER20 DNA MER1_type -15 204 36 682 253 51 35 chr20 64727344 64727469 -7426413 + MER113 DNA MER1_type? 95 217 -304 2141 109 3 0 chr20 64727469 64727752 -7426130 + AluSg1 SINE Alu 3 286 -23 682 253 51 35 chr20 64727752 64728001 -7425881 + MER113 DNA MER1_type? 217 475 -46 256 326 92 27 chr20 64728065 64728276 -7425606 + MIR SINE MIR 33 262 0 477 281 146 18 chr20 64729229 64729503 -7424379 + L2 LINE L2 2335 2643 -671 735 257 39 31 chr20 64729793 64730050 -7423832 + MER77 LTR ERV1 339 597 -8 763 299 131 12 chr20 64730119 64730644 -7423238 + L2 LINE L2 2728 3313 0 195 171 0 0 chr20 64730830 64730865 -7423017 - L3 LINE CR1 -1 1576 1542 209 327 65 47 chr20 64730868 64730975 -7422907 + L2 LINE L2 3199 3307 -6 272 286 140 23 chr20 64732817 64732988 -7420894 + MIR SINE MIR 72 262 0 957 168 117 10 chr20 64733015 64733212 -7420670 - MER20 DNA MER1_type -1 218 1 591 281 33 28 chr20 64733706 64733942 -7419940 - MIR SINE MIR -24 238 1 255 309 186 16 chr20 64734448 64734642 -7419240 - MIR SINE MIR -35 227 1 2416 62 3 0 chr20 64735088 64735378 -7418504 - AluY SINE Alu -20 291 1 232 186 17 17 chr20 64735405 64735464 -7418418 + (CA)n Simple_repeat Simple_repeat 1 59 0 26 30 0 0 chr20 64735747 64735780 -7418102 + AT_rich Low_complexity Low_complexity 1 33 0 1087 170 6 6 chr20 64736018 64736200 -7417682 - AluJ SINE Alu -2 310 129 3426 96 10 4 chr20 64736276 64736767 -7417115 - L1PA12 LINE L1 -7 6161 5668 710 164 8 0 chr20 64736770 64736892 -7416990 - AluJ SINE Alu -189 123 1 1057 99 7 0 chr20 64737164 64737306 -7416576 - AluY SINE Alu -13 298 156 2291 55 31 7 chr20 64737606 64737896 -7415986 + AluY SINE Alu 1 297 -14 26 0 0 0 chr20 64740050 64740076 -7413806 + AT_rich Low_complexity Low_complexity 1 26 0 285 116 0 0 chr20 64740206 64740249 -7413633 - MIR SINE MIR -111 151 109 243 258 32 0 chr20 64740482 64740544 -7413338 + MIR SINE MIR 76 139 -123 348 259 34 54 chr20 64741245 64741392 -7412490 + MIR SINE MIR 94 237 -25 670 333 115 59 chr20 64743317 64743979 -7409903 + L2 LINE L2 2570 3271 -1 477 300 104 27 chr20 64744268 64744313 -7409569 - MIR SINE MIR -8 254 214 2064 95 53 7 chr20 64744313 64744598 -7409284 - AluSx SINE Alu -14 298 1 477 300 104 27 chr20 64744598 64744772 -7409110 - MIR SINE MIR -48 214 18 277 24 48 0 chr20 64745257 64745299 -7408583 + (CA)n Simple_repeat Simple_repeat 1 44 0 408 228 0 0 chr20 64745528 64745636 -7408246 + L1MEc LINE L1 1706 1880 -4502 216 0 0 0 chr20 64745641 64745665 -7408217 + (TG)n Simple_repeat Simple_repeat 2 25 0 299 189 23 30 chr20 64745665 64745797 -7408085 + (TA)n Simple_repeat Simple_repeat 2 132 0 10408 206 39 45 chr20 64745907 64746268 -7407614 + L1MB1 LINE L1 2003 2365 -4039 1531 172 93 34 chr20 64746268 64746559 -7407323 - AluSx SINE Alu -2 310 3 10408 206 39 45 chr20 64746559 64750219 -7403663 + L1MB1 LINE L1 2365 6018 -386 404 62 0 0 chr20 64750217 64750281 -7403601 - L1P LINE L1 -800 5346 5283 * 2729 74 5 5 chr20 64750282 64750660 -7403222 + L1PA7 LINE L1 5777 6154 0 1929 184 18 15 chr20 64750660 64751045 -7402837 + L1MB1 LINE L1 6005 6396 -8 207 69 0 0 chr20 64751064 64751093 -7402789 + (CA)n Simple_repeat Simple_repeat 2 30 0 486 217 45 45 chr20 64751099 64751320 -7402562 - MER113 DNA MER1_type? -257 264 44 251 121 0 5 chr20 64752522 64752570 -7401312 + MLT1I LTR MaLR 98 133 -276 182 379 91 0 chr20 64753207 64753339 -7400543 - MIR SINE MIR -84 178 35 510 289 110 29 chr20 64753798 64754144 -7399738 - L1ME3 LINE L1 -22 6140 5767 305 272 30 41 chr20 64754154 64754323 -7399559 - L1M4 LINE L1 -3856 2290 2124 2101 112 0 0 chr20 64754719 64754996 -7398886 + AluSx SINE Alu 21 297 -15 315 336 79 0 chr20 64755273 64755671 -7398211 - L1MC5 LINE L1 -519 7495 7185 2316 102 0 7 chr20 64756730 64757034 -7396848 - AluSc SINE Alu -7 302 1 705 327 55 19 chr20 64757089 64757511 -7396371 + L2 LINE L2 2868 3304 -9 201 325 33 50 chr20 64757523 64757643 -7396239 - MIR SINE MIR -97 165 48 332 324 65 54 chr20 64757863 64757978 -7395904 - MIR SINE MIR -28 234 115 2505 57 0 7 chr20 64757978 64758278 -7395604 + AluY SINE Alu 1 298 -13 332 324 65 54 chr20 64758278 64758347 -7395535 - MIR SINE MIR -147 115 48 237 344 101 25 chr20 64758442 64758760 -7395122 - L2 LINE L2 -255 3017 2689 829 163 112 51 chr20 64758767 64758963 -7394919 + MER20 DNA MER1_type 1 208 -11 206 394 48 0 chr20 64758997 64759101 -7394781 + MER91C DNA MER1_type 31 139 -1 312 337 53 11 chr20 64760769 64761033 -7392849 + L1ME LINE L1 5517 5791 -330 236 271 51 25 chr20 64761136 64761254 -7392628 + MER94 DNA DNA 5 125 -9 189 0 0 0 chr20 64761434 64761455 -7392427 + (T)n Simple_repeat Simple_repeat 1 21 0 2328 60 0 7 chr20 64761483 64761790 -7392092 - AluY SINE Alu 0 305 1 2835 214 74 34 chr20 64762514 64763548 -7390334 + L1MD2 LINE L1 4404 5396 -963 1673 173 0 18 chr20 64763548 64763832 -7390050 + AluJo SINE Alu 27 305 -7 2835 214 74 34 chr20 64763832 64764406 -7389476 + L1MD2 LINE L1 5396 6069 -290 2207 79 20 10 chr20 64764406 64764698 -7389184 - AluSc SINE Alu -14 295 1 2835 214 74 34 chr20 64764698 64764740 -7389142 + L1MD2 LINE L1 6069 6108 -251 709 136 0 0 chr20 64764853 64764956 -7388926 - AluJb SINE Alu -209 103 1 1957 127 12 3 chr20 64765008 64765330 -7388552 + MER44D DNA MER2_type 13 607 -2 277 296 186 30 chr20 64765359 64765626 -7388256 - L2 LINE L2 -250 3063 2749 2211 78 7 27 chr20 64766002 64766297 -7387585 - AluY SINE Alu -22 289 1 198 0 0 0 chr20 64766752 64766774 -7387108 + (A)n Simple_repeat Simple_repeat 1 22 0 1604 206 78 2 chr20 64767174 64767596 -7386286 - MLT1C LTR MaLR -13 454 1 1865 167 3 0 chr20 64767721 64768026 -7385856 + AluJo SINE Alu 1 306 -6 199 398 65 0 chr20 64768240 64768333 -7385549 - L2 LINE L2 -27 3245 3147 2308 80 3 7 chr20 64768482 64768783 -7385099 + AluSp SINE Alu 1 300 -13 451 236 85 102 chr20 64768783 64769029 -7384853 - MLT1J LTR MaLR -55 456 215 189 361 66 6 chr20 64769225 64769391 -7384491 - L2 LINE L2 -175 3097 2922 * 280 291 28 84 chr20 64769382 64769517 -7384365 - L2 LINE L2 -806 2508 2384 2313 106 0 3 chr20 64769517 64769820 -7384062 + AluSq SINE Alu 1 302 -11 280 291 28 84 chr20 64769820 64769863 -7384019 - L2 LINE L2 -930 2384 2340 331 238 66 13 chr20 64770735 64770886 -7382996 + MER103 DNA DNA 1 159 -7 236 265 120 5 chr20 64771068 64771160 -7382722 - MIR SINE MIR -92 116 15 781 289 204 27 chr20 64772496 64772907 -7380975 - L2 LINE L2 -90 3223 2886 1650 138 107 47 chr20 64772907 64773225 -7380657 + MER1B DNA MER1_type 1 337 0 781 289 204 27 chr20 64773225 64773442 -7380440 - L2 LINE L2 -427 2886 2484 207 284 245 0 chr20 64775038 64775140 -7378742 - L2 LINE L2 -7 3265 3139 2270 96 0 7 chr20 64776522 64776823 -7377059 - AluSg SINE Alu -10 300 2 2456 53 0 0 chr20 64776943 64777244 -7376638 + AluY SINE Alu 1 301 -10 300 305 61 43 chr20 64777646 64777810 -7376072 + L1ME LINE L1 5629 5795 -367 21 36 0 0 chr20 64777958 64777986 -7375896 + AT_rich Low_complexity Low_complexity 1 28 0 1919 166 13 0 chr20 64778310 64778612 -7375270 + AluSx SINE Alu 1 306 -6 4303 202 19 38 chr20 64778741 64780143 -7373739 + L1MD1 LINE L1 4862 6236 -6 566 250 90 5 chr20 64780680 64780892 -7372990 - Tigger8 DNA MER2_type -118 548 319 388 290 124 14 chr20 64781114 64781259 -7372623 + MER5A DNA MER1_type 1 161 -28 252 268 93 11 chr20 64781716 64781899 -7371983 + MER113 DNA MER1_type? 5 202 -319 1557 170 19 22 chr20 64781901 64782172 -7371710 + AluJb SINE Alu 1 270 -42 306 0 0 0 chr20 64782174 64782208 -7371674 + (TAAA)n Simple_repeat Simple_repeat 3 36 0 1109 162 69 15 chr20 64782297 64782501 -7371381 - MER20 DNA MER1_type -4 215 1 1156 216 9 0 chr20 64783133 64783355 -7370527 - MER58A DNA MER1_type 0 224 1 1765 47 0 0 chr20 64783823 64784038 -7369844 + L1PA5 LINE L1 5939 6153 -1 612 298 32 28 chr20 64784151 64784399 -7369483 - MIR SINE MIR -2 260 12 185 214 0 89 chr20 64785205 64785230 -7368652 + MIR3 SINE MIR 123 142 -66 3423 163 68 38 chr20 64785230 64785936 -7367946 + LTR8A LTR ERV1 1 727 0 185 214 0 89 chr20 64785936 64785966 -7367916 + MIR3 SINE MIR 142 173 -35 299 281 239 22 chr20 64786392 64786663 -7367219 + L1ME LINE L1 5532 5859 -262 285 303 17 126 chr20 64786828 64786852 -7367030 + L2 LINE L2 2468 2493 -821 375 23 0 0 chr20 64786852 64786896 -7366986 + (CA)n Simple_repeat Simple_repeat 1 44 0 1534 194 33 40 chr20 64786903 64787330 -7366552 + LTR37A LTR ERV1 3 426 0 285 303 17 126 chr20 64787330 64787647 -7366235 + L2 LINE L2 2499 2779 -535 1088 306 97 31 chr20 64788151 64788295 -7365587 - L2 LINE L2 -1 3312 3179 366 23 0 0 chr20 64788295 64788338 -7365544 + (TG)n Simple_repeat Simple_repeat 2 44 0 1088 306 97 31 chr20 64788338 64788701 -7365181 - L2 LINE L2 -134 3179 2841 2262 114 0 3 chr20 64788701 64789009 -7364873 + AluSx SINE Alu 1 307 -5 1088 306 97 31 chr20 64789009 64789447 -7364435 - L2 LINE L2 -472 2841 2311 349 193 50 109 chr20 64789547 64789614 -7364268 + MIR SINE MIR 146 205 -57 1593 174 16 30 chr20 64789614 64789918 -7363964 + AluJb SINE Alu 1 300 -12 349 193 50 109 chr20 64789918 64789969 -7363913 + MIR SINE MIR 205 257 -5 330 282 92 8 chr20 64790040 64790171 -7363711 - L2 LINE L2 0 3313 3172 195 341 44 0 chr20 64790349 64790440 -7363442 + L2 LINE L2 2773 2867 -447 361 271 66 42 chr20 64790560 64790726 -7363156 - MLT1H LTR MaLR -2 547 378 2194 167 113 27 chr20 64790861 64791129 -7362753 - L1MD1 LINE L1 0 6242 5998 2059 104 36 29 chr20 64791129 64791437 -7362445 - AluSg SINE Alu 0 310 1 2194 167 113 27 chr20 64791437 64791719 -7362163 - L1MD1 LINE L1 -244 5998 5645 1933 170 47 0 chr20 64791716 64792117 -7361765 - L1MDa LINE L1 -4271 2269 1850 * 4276 218 161 20 chr20 64792129 64792170 -7361712 - L1MDa LINE L1 -4932 1608 1574 700 177 106 81 chr20 64792170 64792301 -7361581 - MER6B DNA MER2_type -658 207 68 2395 107 0 0 chr20 64792301 64792609 -7361273 + AluSg SINE Alu 1 308 -2 700 177 106 81 chr20 64792609 64792675 -7361207 - MER6B DNA MER2_type -797 68 5 4276 218 161 20 chr20 64792675 64794028 -7359854 - L1MDa LINE L1 -4966 1574 17 2126 94 11 0 chr20 64795307 64795618 -7358264 + AluSg1 SINE Alu 1 314 0 379 359 28 0 chr20 64795772 64795953 -7357929 - MIR SINE MIR -24 238 53 1852 150 3 7 chr20 64795958 64796251 -7357631 + AluJb SINE Alu 9 300 -12 269 291 25 0 chr20 64796765 64796844 -7357038 + MIR SINE MIR 89 169 -93 24 32 0 0 chr20 64796928 64796959 -7356923 + AT_rich Low_complexity Low_complexity 1 31 0 993 201 29 5 chr20 64797110 64797319 -7356563 + MER20 DNA MER1_type 1 214 -5 187 257 106 84 chr20 64797872 64798051 -7355831 + L2 LINE L2 2871 3053 -219 647 215 140 47 chr20 64798100 64798314 -7355568 + MIR SINE MIR 17 250 -12 401 289 31 8 chr20 64798321 64798449 -7355433 + L2 LINE L2 3183 3313 0 225 188 116 29 chr20 64798525 64798594 -7355288 + L2 LINE L2 3168 3242 -71 2936 123 60 8 chr20 64799616 64800151 -7353731 - LTR49 LTR ERV1 0 595 33 990 219 168 14 chr20 64800157 64800449 -7353433 - MER57A LTR ERV1 -66 337 1 2248 176 9 9 chr20 64800449 64800891 -7352991 + L1MB7 LINE L1 5738 6179 -5 245 272 88 48 chr20 64800993 64801140 -7352742 - MIR SINE MIR -12 250 98 724 269 98 67 chr20 64801774 64802160 -7351722 + MLT1J LTR MaLR 103 500 -11 2182 118 7 3 chr20 64802207 64802511 -7351371 - AluSq SINE Alu -6 307 3 187 264 271 0 chr20 64804719 64804848 -7349034 - MIR SINE MIR 0 262 99 310 246 55 55 chr20 64805740 64805850 -7348032 + MIR SINE MIR 38 147 -61 2067 138 10 0 chr20 64806535 64806833 -7347049 + AluSq SINE Alu 1 301 -12 439 187 0 0 chr20 64806986 64807061 -7346821 + AluSg/x SINE Alu 218 292 -20 274 311 0 0 chr20 64807066 64807140 -7346742 + Zaphod DNA AcHobo 3957 4030 -1 2147 134 3 0 chr20 64807200 64807505 -7346377 - AluSx SINE Alu -6 306 1 319 104 21 0 chr20 64807712 64807760 -7346122 - L2 LINE L2 0 3313 3265 2272 108 16 0 chr20 64807975 64808281 -7345601 + AluSx SINE Alu 1 311 -1 271 261 38 108 chr20 64808422 64808456 -7345426 - L2 LINE L2 -4 3309 3274 1490 110 55 0 chr20 64808456 64808674 -7345208 - MER30 DNA MER1_type 0 230 1 271 261 38 108 chr20 64808674 64808796 -7345086 - L2 LINE L2 -39 3274 3164 1730 248 72 54 chr20 64808815 64809520 -7344362 + MER21B LTR ERV1 1 718 -145 1221 298 115 31 chr20 64809611 64809974 -7343908 - L2 LINE L2 -168 3145 2814 1784 188 0 22 chr20 64809974 64810293 -7343589 - AluJo SINE Alu 0 312 1 1221 298 115 31 chr20 64810293 64810662 -7343220 - L2 LINE L2 -499 2814 2357 2138 42 4 0 chr20 64811693 64812050 -7341832 - L1PA4 LINE L1 -621 5534 5177 5290 32 0 0 chr20 64812050 64812666 -7341216 + L1PA4 LINE L1 5536 6155 0 309 286 27 0 chr20 64812667 64812779 -7341103 + MIR SINE MIR 137 251 -11 1636 194 39 22 chr20 64812783 64813139 -7340743 - MLT1A1 LTR MaLR -3 362 1 261 250 0 29 chr20 64813143 64813211 -7340671 + (CACCAT)n Simple_repeat Simple_repeat 1 66 0 311 331 40 0 chr20 64813212 64813336 -7340546 - MIR SINE MIR -89 173 45 286 359 164 0 chr20 64813945 64814073 -7339809 + L2 LINE L2 3124 3272 0 191 327 18 0 chr20 64814124 64814179 -7339703 + MIR SINE MIR 21 76 -186 225 233 0 0 chr20 64815227 64815270 -7338612 + MLT1K LTR MaLR 1 43 -462 2192 95 3 10 chr20 64815477 64815772 -7338110 + AluSq SINE Alu 1 293 -20 320 209 11 0 chr20 64815851 64815942 -7337940 + GA-rich Low_complexity Low_complexity 3 94 0 189 0 0 0 chr20 64816182 64816203 -7337679 + (A)n Simple_repeat Simple_repeat 1 21 0 442 351 67 34 chr20 64816869 64817225 -7336657 - L3b LINE CR1 -105 1478 1111 234 0 0 0 chr20 64817301 64817327 -7336555 + (T)n Simple_repeat Simple_repeat 1 26 0 598 314 107 32 chr20 64818707 64819182 -7334700 + MLT1K LTR MaLR 54 564 -24 521 243 192 6 chr20 64819471 64819648 -7334234 - MIR SINE MIR -10 252 43 207 355 75 0 chr20 64819683 64819790 -7334092 + MIR SINE MIR 148 262 0 1335 62 0 11 chr20 64820662 64820839 -7333043 - L1PA10 LINE L1 -1 6167 5993 1422 214 7 14 chr20 64821298 64821592 -7332290 + AluJo SINE Alu 3 294 -18 22 0 0 0 chr20 64821592 64821614 -7332268 + AT_rich Low_complexity Low_complexity 1 22 0 2096 125 3 0 chr20 64821614 64821909 -7331973 + AluSx SINE Alu 1 296 -16 2076 110 3 10 chr20 64821910 64822221 -7331661 + AluSp SINE Alu 1 313 0 311 363 95 23 chr20 64822767 64823073 -7330809 + L2 LINE L2 2633 2960 -354 1231 187 27 51 chr20 64823177 64823509 -7330373 + MER33 DNA MER1_type 1 324 0 302 271 84 28 chr20 64823594 64823701 -7330181 + L2 LINE L2 3158 3270 -2 195 158 53 0 chr20 64823989 64824027 -7329855 + L2 LINE L2 3261 3300 -13 1751 149 7 7 chr20 64824029 64824318 -7329564 + AluJb SINE Alu 1 289 -23 21 36 0 0 chr20 64824321 64824349 -7329533 + AT_rich Low_complexity Low_complexity 1 28 0 244 260 0 0 chr20 64824392 64824442 -7329440 - MIR SINE MIR -4 258 209 * 1086 270 123 61 chr20 64824436 64825310 -7328572 + L2 LINE L2 2298 3257 -56 363 250 171 0 chr20 64825354 64825369 -7328513 - MIR SINE MIR -56 206 195 855 220 75 28 chr20 64825369 64825583 -7328299 - MER58A DNA MER1_type 0 224 1 363 250 171 0 chr20 64825583 64825707 -7328175 - MIR SINE MIR -67 195 43 551 252 130 13 chr20 64826215 64826452 -7327430 - MER113 DNA MER1_type? -64 457 193 280 302 18 18 chr20 64826452 64826562 -7327320 + MLT2F LTR ERVL 1 125 -503 562 280 178 34 chr20 64826718 64827129 -7326753 + MLT2F LTR ERVL 194 663 0 24 0 0 0 chr20 64827452 64827476 -7326406 + AT_rich Low_complexity Low_complexity 1 24 0 26 74 0 0 chr20 64827506 64827560 -7326322 + AT_rich Low_complexity Low_complexity 1 54 0 410 276 143 73 chr20 64827789 64828338 -7325544 + L1MC4a LINE L1 5557 5758 -363 243 240 10 115 chr20 64828422 64828526 -7325356 + L2 LINE L2 3221 3313 0 2571 65 0 0 chr20 64829294 64829604 -7324278 - AluY SINE Alu -1 310 1 228 218 18 0 chr20 64829660 64829715 -7324167 + L1ME LINE L1 5567 5622 -499 2408 86 3 3 chr20 64829928 64830232 -7323650 + AluSp SINE Alu 1 304 -9 208 331 198 8 chr20 64830849 64830970 -7322912 + MIR3 SINE MIR 2 145 -63 232 297 80 63 chr20 64831379 64831554 -7322328 + MIR SINE MIR 23 200 -62 205 333 50 40 chr20 64831658 64831757 -7322125 + MIR SINE MIR 48 147 -61 191 167 0 21 chr20 64832931 64832979 -7320903 + (TAAA)n Simple_repeat Simple_repeat 4 50 0 395 341 34 19 chr20 64833634 64833839 -7320043 - MIR SINE MIR -50 212 5 258 322 11 0 chr20 64833878 64833965 -7319917 + MIR3 SINE MIR 89 176 -32 2562 58 3 0 chr20 64833995 64834304 -7319578 - AluY SINE Alu -1 310 1 2097 115 31 0 chr20 64834894 64835181 -7318701 - AluSx SINE Alu -16 296 1 21 0 0 0 chr20 64835306 64835327 -7318555 + AT_rich Low_complexity Low_complexity 1 21 0 295 277 128 0 chr20 64835902 64836050 -7317832 - LTR16A LTR ERVL 0 450 284 243 275 187 18 chr20 64836617 64836788 -7317094 - L2 LINE L2 -2 3311 3112 783 163 30 79 chr20 64836791 64836834 -7317048 + MER3 DNA MER1_type 2 46 -163 1879 146 0 13 chr20 64836834 64837135 -7316747 - AluJo SINE Alu -15 297 1 783 163 30 79 chr20 64837135 64837293 -7316589 + MER3 DNA MER1_type 46 193 -16 2277 100 0 16 chr20 64837708 64838018 -7315864 - AluSx SINE Alu -7 305 1 333 0 0 0 chr20 64838066 64838103 -7315779 + (CA)n Simple_repeat Simple_repeat 2 38 0 295 289 81 22 chr20 64838142 64838415 -7315467 + L1MC/D LINE L1 5552 5840 -281 189 111 0 56 chr20 64838700 64838754 -7315128 + (TA)n Simple_repeat Simple_repeat 1 51 0 374 165 0 24 chr20 64838786 64838871 -7315011 + CT-rich Low_complexity Low_complexity 2 84 0 695 324 104 14 chr20 64839479 64839902 -7313980 - L2 LINE L2 -1 3312 2852 2398 83 0 13 chr20 64839902 64840215 -7313667 + AluSc SINE Alu 1 309 0 221 100 50 0 chr20 64840420 64840460 -7313422 + (TATG)n Simple_repeat Simple_repeat 2 43 0 335 315 167 28 chr20 64840723 64841047 -7312835 + L1MC/D LINE L1 5385 5753 -2055 475 230 48 0 chr20 64841048 64841174 -7312708 + MIR SINE MIR 36 167 -95 23 33 0 0 chr20 64841212 64841242 -7312640 + AT_rich Low_complexity Low_complexity 1 30 0 201 178 0 0 chr20 64841348 64841393 -7312489 + (CA)n Simple_repeat Simple_repeat 2 46 0 441 192 115 0 chr20 64841796 64841900 -7311982 - L2 LINE L2 0 3313 3198 201 139 28 0 chr20 64841915 64841951 -7311931 + MIR SINE MIR 131 167 -95 387 229 0 20 chr20 64841969 64842122 -7311760 + GA-rich Low_complexity Low_complexity 3 152 0 226 154 154 0 chr20 64842160 64842212 -7311670 + L2 LINE L2 3180 3239 -74 209 326 0 0 chr20 64842223 64842309 -7311573 + A-rich Low_complexity Low_complexity 1 86 0 183 333 0 0 chr20 64843969 64844020 -7309862 - L2 LINE L2 -19 3253 3203 368 296 30 30 chr20 64844033 64844165 -7309717 - MIR SINE MIR -111 151 20 246 62 0 0 chr20 64844201 64844233 -7309649 + (TG)n Simple_repeat Simple_repeat 2 33 0 3924 168 76 70 chr20 64844279 64845416 -7308466 + L1MD1 LINE L1 4639 5768 -474 1865 80 46 120 chr20 64845416 64845740 -7308142 - AluSg SINE Alu -10 300 1 3924 168 76 70 chr20 64845740 64845763 -7308119 + L1MD1 LINE L1 5768 5789 -453 1538 198 7 38 chr20 64845763 64846056 -7307826 - AluJb SINE Alu -26 286 3 3924 168 76 70 chr20 64846056 64846377 -7307505 + L1MD1 LINE L1 5789 6240 -2 2350 92 0 0 chr20 64846398 64846693 -7307189 - AluSq SINE Alu -18 295 1 204 323 269 0 chr20 64847328 64847421 -7306461 + L2 LINE L2 3149 3266 -6 2015 141 0 3 chr20 64847993 64848290 -7305592 + AluSx SINE Alu 1 296 -16 525 274 183 10 chr20 64848852 64849060 -7304822 - MIR SINE MIR -5 257 14 1362 247 127 50 chr20 64849077 64849321 -7304561 - L2 LINE L2 0 3313 3089 2100 115 7 3 chr20 64849321 64849607 -7304275 + AluSg SINE Alu 1 287 -23 1055 18 64 0 chr20 64849609 64849890 -7303992 + (TAGA)n Simple_repeat Simple_repeat 1 299 0 1362 247 127 50 chr20 64849890 64850088 -7303794 - L2 LINE L2 -224 3089 2908 4221 60 16 14 chr20 64850088 64850641 -7303241 - MER41A LTR ERV1 0 554 1 1362 247 127 50 chr20 64850641 64851164 -7302718 - L2 LINE L2 -405 2908 2157 215 224 37 0 chr20 64851709 64851816 -7302066 + (TA)n Simple_repeat Simple_repeat 1 111 0 226 190 111 6 chr20 64851992 64852082 -7301800 - MIR SINE MIR -52 210 104 343 95 0 32 chr20 64855179 64855242 -7298640 + (GGA)n Simple_repeat Simple_repeat 2 62 0 195 154 33 16 chr20 64855415 64855548 -7298334 + T-rich Low_complexity Low_complexity 1 135 0 285 247 26 0 chr20 64856305 64856382 -7297500 - MIR SINE MIR -29 233 155 213 283 54 22 chr20 64856646 64856738 -7297144 - MIR SINE MIR -162 100 6 349 325 37 49 chr20 64856750 64856996 -7296886 + L3 LINE CR1 1332 1574 -3 2238 102 22 22 chr20 64857742 64858055 -7295827 + AluSp SINE Alu 1 313 0 224 272 30 0 chr20 64858076 64858145 -7295737 - MER91B DNA MER1_type -54 86 14 426 279 51 39 chr20 64858411 64858665 -7295217 + MLT1K LTR MaLR 200 456 -132 331 316 90 64 chr20 64858708 64858892 -7294990 - MLT1J LTR MaLR -27 419 231 2160 160 22 6 chr20 64858892 64859249 -7294633 + THE1B LTR MaLR 1 363 -1 331 316 90 64 chr20 64859249 64859421 -7294461 - MLT1J LTR MaLR -215 231 65 333 280 0 19 chr20 64859493 64859600 -7294282 + MLT1K LTR MaLR 480 584 -4 269 185 315 23 chr20 64860007 64860137 -7293745 + MLT1K LTR MaLR 344 511 -77 663 176 15 15 chr20 64860198 64860334 -7293548 + MER96 DNA MER1_type? 1 136 -39 2227 56 31 0 chr20 64860336 64860622 -7293260 + AluY SINE Alu 1 295 -16 806 294 107 47 chr20 64861341 64861402 -7292480 - L2 LINE L2 -7 3306 3250 282 95 0 0 chr20 64861402 64861444 -7292438 + (CA)n Simple_repeat Simple_repeat 1 42 0 806 294 107 47 chr20 64861444 64862020 -7291862 - L2 LINE L2 -63 3250 2621 24 53 0 0 chr20 64862122 64862160 -7291722 + AT_rich Low_complexity Low_complexity 1 38 0 2429 97 3 0 chr20 64862393 64862704 -7291178 - AluSp SINE Alu -1 312 1 289 280 45 45 chr20 64863422 64863554 -7290328 - L2 LINE L2 0 3313 3182 270 331 34 0 chr20 64864331 64864468 -7289414 + MIR SINE MIR 31 170 -67 353 248 116 16 chr20 64864519 64864640 -7289242 - MIR SINE MIR -44 218 86 352 250 164 0 chr20 64864893 64865009 -7288873 - MLT1J LTR MaLR -333 178 44 364 179 26 0 chr20 64865262 64865340 -7288542 - HsTC2 DNA Tc2 -5 1893 1814 1832 254 11 27 chr20 64865384 64865946 -7287936 - L1ME1 LINE L1 -5 6161 5609 298 223 136 0 chr20 64866005 64866108 -7287774 + L1M4 LINE L1 2801 2917 -3229 286 159 0 16 chr20 64866109 64866172 -7287710 + L1MA10 LINE L1 6271 6332 -2 2124 244 112 6 chr20 64866268 64867126 -7286756 - L1MEc LINE L1 -2769 3446 2498 641 233 47 68 chr20 64867147 64867576 -7286306 - L1MEc LINE L1 -3913 2483 2064 204 349 89 34 chr20 64867815 64868139 -7285743 + L2 LINE L2 2399 2740 -574 644 311 50 13 chr20 64868341 64868640 -7285242 + LTR16B LTR ERVL 64 373 -91 827 178 67 180 chr20 64868640 64868727 -7285155 + MLT2D LTR ERVL 1 96 -318 2830 67 0 8 chr20 64868727 64869085 -7284797 - THE1A LTR MaLR 0 355 1 827 178 67 180 chr20 64869085 64869463 -7284419 + MLT2D LTR ERVL 96 413 -1 253 288 0 25 chr20 64869471 64869551 -7284331 + LTR16B LTR ERVL 381 458 -6 326 222 67 33 chr20 64869849 64869939 -7283943 + L2 LINE L2 3221 3313 0 2177 237 57 36 chr20 64870091 64870846 -7283036 - L1ME2 LINE L1 -19 6145 5375 2266 163 42 127 chr20 64870848 64871382 -7282500 - LTR8 LTR ERV1 0 691 238 431 0 0 0 chr20 64871382 64871434 -7282448 - L1PA3 LINE L1 -2 6153 6102 2266 163 42 127 chr20 64871434 64871654 -7282228 - LTR8 LTR ERV1 -453 238 1 811 204 7 0 chr20 64871792 64871934 -7281948 + AluJb SINE Alu 158 300 -12 250 304 10 0 chr20 64872254 64872356 -7281526 - L1M4 LINE L1 -367 5811 5709 645 321 86 30 chr20 64872790 64873287 -7280595 + L2 LINE L2 2761 3273 -40 297 135 0 0 chr20 64873291 64873343 -7280539 + (TGGA)n Simple_repeat Simple_repeat 1 52 0 2340 94 7 0 chr20 64873455 64873754 -7280128 - AluSq SINE Alu -12 301 1 844 174 66 33 chr20 64874004 64874118 -7279764 + MER20 DNA MER1_type 1 110 -109 1818 180 43 23 chr20 64874118 64874513 -7279369 - MER57A LTR ERV1 0 403 1 844 174 66 33 chr20 64874513 64874610 -7279272 + MER20 DNA MER1_type 110 219 0 203 352 55 23 chr20 64874628 64874756 -7279126 + MIR SINE MIR 125 256 -6 297 328 34 8 chr20 64874803 64874922 -7278960 + L2 LINE L2 3146 3267 -5 614 265 76 80 chr20 64875241 64875459 -7278423 - L1M4 LINE L1 -734 5436 5218 1928 139 31 0 chr20 64875459 64875747 -7278135 + AluSx SINE Alu 1 297 -15 614 265 76 80 chr20 64875747 64876058 -7277824 - L1M4 LINE L1 -952 5218 4910 2544 129 43 7 chr20 64876167 64876373 -7277509 + MER57B LTR ERV1 1 198 -236 234 0 0 0 chr20 64876373 64876399 -7277483 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 2544 129 43 7 chr20 64876399 64876611 -7277271 + MER57B LTR ERV1 198 434 0 1377 142 12 8 chr20 64876615 64876847 -7277035 - LTR49 LTR ERV1 0 595 363 1900 155 51 25 chr20 64876847 64877202 -7276680 - THE1B LTR MaLR 0 364 1 * 1906 108 108 0 chr20 64877202 64877533 -7276349 - LTR49 LTR ERV1 -227 368 1 2685 204 24 34 chr20 64877748 64878416 -7275466 - MER67B LTR ERV1 0 661 1 265 100 0 0 chr20 64878416 64878456 -7275426 - MER67A LTR ERV1 -463 80 41 3476 148 32 36 chr20 64878457 64879033 -7274849 - MER50 LTR ERV1 -23 711 137 2405 79 0 0 chr20 64879033 64879338 -7274544 - AluY SINE Alu -6 305 1 3476 148 32 36 chr20 64879338 64879475 -7274407 - MER50 LTR ERV1 -597 137 1 322 68 0 0 chr20 64879475 64879519 -7274363 - MER67A LTR ERV1 -499 44 1 315 296 31 49 chr20 64879553 64879715 -7274167 - MIR SINE MIR 0 262 104 373 193 58 0 chr20 64880050 64880149 -7273733 + L1MD3 LINE L1 7890 8040 -2 183 156 0 0 chr20 64880515 64880547 -7273335 + (TATATG)n Simple_repeat Simple_repeat 1 32 0 1523 218 62 32 chr20 64881085 64881357 -7272525 + MER39 LTR ERV1 1 263 -444 2087 112 10 0 chr20 64881357 64881652 -7272230 + AluSg SINE Alu 3 300 -10 1523 218 62 32 chr20 64881652 64881920 -7271962 + MER39 LTR ERV1 263 706 -1 1745 171 3 30 chr20 64882216 64882521 -7271361 - AluJb SINE Alu -15 297 1 508 215 141 0 chr20 64883026 64883189 -7270693 + MER110A LTR ERV1 6 191 -277 405 294 69 69 chr20 64883292 64883581 -7270301 + MER110 LTR ERV1 203 491 0 284 243 85 43 chr20 64883929 64884160 -7269722 + MER34 LTR ERV1 341 585 0 2041 151 3 0 chr20 64884507 64884818 -7269064 - AluSx SINE Alu 0 312 1 1558 138 95 35 chr20 64885016 64885299 -7268583 - AluSx SINE Alu -12 300 1 1962 86 7 0 chr20 64886069 64886452 -7267430 - L1PA7 LINE L1 -684 5488 5104 5234 65 8 0 chr20 64886452 64887112 -7266770 + L1PA7 LINE L1 5482 6151 -3 756 332 20 7 chr20 64887651 64887943 -7265939 + MER69B DNA AcHobo 143 438 -788 894 234 32 106 chr20 64888121 64888824 -7265058 + MER69B DNA AcHobo 481 1193 -33 706 223 33 22 chr20 64889094 64889484 -7264398 + LTR37A LTR ERV1 6 426 0 709 202 0 8 chr20 64889676 64889795 -7264087 + FLAM_C SINE Alu 1 118 -15 1736 188 0 25 chr20 64890835 64891155 -7262727 + AluJo SINE Alu 1 312 0 2259 142 0 24 chr20 64891368 64891741 -7262141 + THE1B LTR MaLR 1 364 0 448 180 34 0 chr20 64892603 64892692 -7261190 + MLT1C LTR MaLR 1 92 -375 1722 205 46 12 chr20 64892701 64893111 -7260771 + MLT1C LTR MaLR 44 467 0 666 299 11 11 chr20 64893774 64893961 -7259921 + MIR SINE MIR 1 187 -75 2244 172 22 52 chr20 64894070 64894338 -7259544 + MER66B LTR ERV1 1 250 -236 2118 108 0 10 chr20 64894338 64894666 -7259216 + AluSq SINE Alu 1 325 0 2244 172 22 52 chr20 64894666 64894897 -7258985 + MER66B LTR ERV1 250 486 0 206 250 23 0 chr20 64895231 64895275 -7258607 + L2 LINE L2 3257 3301 -12 2172 89 0 7 chr20 64895413 64895722 -7258160 - AluSc SINE Alu 0 307 1 686 191 0 0 chr20 64895830 64895956 -7257926 + MER58B DNA MER1_type 208 333 -8 1507 177 7 59 chr20 64896474 64896762 -7257120 - AluJo SINE Alu -39 273 1 24 32 0 0 chr20 64897153 64897184 -7256698 + AT_rich Low_complexity Low_complexity 1 31 0 189 0 0 0 chr20 64897239 64897260 -7256622 + (TGAA)n Simple_repeat Simple_repeat 2 22 0 208 238 12 12 chr20 64897992 64898072 -7255810 + (TATG)n Simple_repeat Simple_repeat 4 83 0 1559 192 25 27 chr20 64898073 64898449 -7255433 - MLT2D LTR ERVL -43 477 1 964 231 71 9 chr20 64898496 64898721 -7255161 + MER8 DNA MER2_type 1 239 0 192 200 0 0 chr20 64898721 64898761 -7255121 + (TA)n Simple_repeat Simple_repeat 1 40 0 201 195 0 0 chr20 64898800 64898841 -7255041 + (TATG)n Simple_repeat Simple_repeat 2 42 0 213 175 0 0 chr20 64898883 64898923 -7254959 + (TA)n Simple_repeat Simple_repeat 1 40 0 2294 102 3 0 chr20 64898958 64899251 -7254631 - AluSx SINE Alu -18 294 1 2258 93 3 3 chr20 64899294 64899596 -7254286 - AluY SINE Alu -9 302 1 406 182 74 66 chr20 64899602 64899723 -7254159 - FLAM_A SINE Alu -11 122 1 4701 156 78 50 chr20 64899725 64900101 -7253781 - Tigger3b DNA MER2_type -1866 1162 798 2078 110 7 3 chr20 64900101 64900392 -7253490 - AluSg1 SINE Alu -17 292 1 4701 156 78 50 chr20 64900392 64901145 -7252737 - Tigger3b DNA MER2_type -2230 798 2 5641 141 22 20 chr20 64901151 64901294 -7252588 - Tigger1 DNA MER2_type -3 2415 2274 2020 192 43 22 chr20 64901294 64901711 -7252171 - MSTB LTR MaLR 0 426 1 5641 141 22 20 chr20 64901711 64901817 -7252065 - Tigger1 DNA MER2_type -144 2274 2170 1995 121 53 3 chr20 64901817 64902099 -7251783 - AluSx SINE Alu -16 296 1 5641 141 22 20 chr20 64902099 64903169 -7250713 - Tigger1 DNA MER2_type -248 2170 1001 1147 193 0 0 chr20 64903167 64903390 -7250492 - Tigger1 DNA MER2_type -2193 225 3 * 242 323 0 38 chr20 64903663 64903796 -7250086 - L1ME LINE L1 -312 5858 5731 647 225 63 89 chr20 64903865 64903938 -7249944 + MER5A DNA MER1_type 1 74 -115 1652 209 28 14 chr20 64903938 64904296 -7249586 + MLT1A1 LTR MaLR 3 365 0 647 225 63 89 chr20 64904296 64904413 -7249469 + MER5A DNA MER1_type 74 186 -3 22 0 0 0 chr20 64905281 64905303 -7248579 + AT_rich Low_complexity Low_complexity 1 22 0 572 253 88 84 chr20 64905451 64905712 -7248170 + MIR SINE MIR 1 262 0 45 45 0 0 chr20 64905815 64905881 -7248001 + AT_rich Low_complexity Low_complexity 1 66 0 201 147 0 0 chr20 64906020 64906054 -7247828 + (CA)n Simple_repeat Simple_repeat 1 34 0 406 285 65 27 chr20 64906687 64906873 -7247009 + MER117 DNA MER1_type 3 195 -2 250 305 98 0 chr20 64907065 64907147 -7246735 + L2 LINE L2 3211 3300 -13 408 329 81 61 chr20 64907149 64907736 -7246146 - L2 LINE L2 -2 3270 2686 1896 196 14 6 chr20 64909124 64909486 -7244396 - MLT1A1 LTR MaLR 0 365 1 1510 293 168 18 chr20 64909570 64910307 -7243575 + L2 LINE L2 670 1517 -1797 288 318 31 36 chr20 64910663 64910855 -7243027 + L2 LINE L2 1518 1708 -1606 1371 299 135 15 chr20 64911013 64911741 -7242141 + L2 LINE L2 1710 2524 -790 296 266 87 39 chr20 64911785 64912014 -7241868 - MER97c DNA MER1_type? -37 1053 814 1435 271 53 16 chr20 64912082 64912664 -7241218 - MER97b DNA MER1_type? -448 605 2 287 230 0 0 chr20 64912812 64912886 -7240996 + Charlie8 DNA MER1_type 72 145 -2272 832 229 137 19 chr20 64912886 64913200 -7240682 + L1MB8 LINE L1 5828 6178 0 255 334 44 57 chr20 64913216 64913533 -7240349 + Charlie8 DNA MER1_type 142 454 -1963 486 33 0 0 chr20 64913960 64914020 -7239862 + (TC)n Simple_repeat Simple_repeat 1 60 0 234 0 0 0 chr20 64914019 64914045 -7239837 + (CA)n Simple_repeat Simple_repeat 1 26 0 * 2173 117 3 3 chr20 64914079 64914378 -7239504 + AluSq SINE Alu 1 299 -14 1849 170 40 36 chr20 64914403 64914943 -7238939 - MLT2A2 LTR ERVL -8 546 1 2129 107 31 3 chr20 64915038 64915327 -7238555 + AluSx SINE Alu 3 299 -13 215 315 90 0 chr20 64915333 64915422 -7238460 + MIR SINE MIR 57 153 -109 21 0 0 0 chr20 64916151 64916172 -7237710 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr20 64916255 64916278 -7237604 + AT_rich Low_complexity Low_complexity 1 23 0 335 282 87 72 chr20 64916680 64917078 -7236804 + L1ME4a LINE L1 5613 6007 -114 1545 236 35 65 chr20 64917156 64917668 -7236214 - MLT2B3 LTR ERVL 0 554 58 3138 162 49 65 chr20 64917693 64918132 -7235750 - LTR39 LTR ERV1 -53 730 306 3820 53 0 0 chr20 64918132 64918602 -7235280 - L1PA5 LINE L1 -13 6141 5672 3138 162 49 65 chr20 64918602 64918903 -7234979 - LTR39 LTR ERV1 -477 306 2 392 97 0 0 chr20 64918933 64918995 -7234887 + L1ME4a LINE L1 6060 6121 0 741 266 0 5 chr20 64919577 64919765 -7234117 - AluJo SINE Alu -6 306 120 2077 58 43 22 chr20 64920023 64920325 -7233557 - AluY SINE Alu 0 308 1 292 365 9 9 chr20 64920345 64920460 -7233422 + L2 LINE L2 3193 3307 -6 3285 230 90 29 chr20 64920675 64921295 -7232587 - L1MC4 LINE L1 -141 7901 7320 1764 192 0 10 chr20 64921295 64921597 -7232285 + AluJo SINE Alu 1 299 -13 3285 230 90 29 chr20 64921597 64922121 -7231761 - L1MC4 LINE L1 -722 7320 6687 274 282 0 0 chr20 64922134 64922212 -7231670 - L1MC4 LINE L1 -1492 6550 6473 293 330 18 9 chr20 64922301 64922413 -7231469 - L2 LINE L2 -9 3304 3192 243 0 0 0 chr20 64922450 64922477 -7231405 + (T)n Simple_repeat Simple_repeat 1 27 0 470 324 73 66 chr20 64922981 64923531 -7230351 - L2 LINE L2 0 3313 2739 1666 181 0 30 chr20 64924646 64924944 -7228938 + AluJb SINE Alu 1 289 -23 288 252 8 92 chr20 64924971 64925090 -7228792 + MER102b DNA MER1_type 224 332 -9 674 207 58 0 chr20 64926020 64926208 -7227674 - MER96B DNA MER1_type? -25 392 194 1961 112 29 4 chr20 64926230 64926537 -7227345 - AluSq SINE Alu 0 314 1 3751 41 68 0 chr20 64927179 64927638 -7226244 - LTR2B LTR ERV1 0 490 1 580 262 296 14 chr20 64927775 64928069 -7225813 + L2 LINE L2 2907 3283 -30 582 234 93 20 chr20 64928072 64928221 -7225661 - LTR16A1 LTR ERVL 0 457 320 408 262 78 0 chr20 64928221 64928324 -7225558 + MER81 DNA DNA 1 111 -3 582 234 93 20 chr20 64928324 64928551 -7225331 - LTR16A1 LTR ERVL -137 320 12 282 244 0 47 chr20 64929121 64929207 -7224675 + (TATATG)n Simple_repeat Simple_repeat 3 84 0 1614 175 3 41 chr20 64930990 64931305 -7222577 + AluJo SINE Alu 1 303 -9 1026 233 47 74 chr20 64931675 64931752 -7222130 + MSTD LTR MaLR 1 79 -317 2756 26 0 0 chr20 64931752 64932060 -7221822 - AluY SINE Alu -3 308 1 1026 233 47 74 chr20 64932060 64932389 -7221493 + MSTD LTR MaLR 79 396 0 689 343 17 4 chr20 64932459 64932698 -7221184 + MIR SINE MIR 11 252 -10 1856 159 3 3 chr20 64933240 64933535 -7220347 + AluSg SINE Alu 1 295 -15 225 333 52 0 chr20 64933960 64934056 -7219826 + L2 LINE L2 1042 1142 -2172 243 0 0 0 chr20 64934512 64934539 -7219343 + (T)n Simple_repeat Simple_repeat 1 27 0 886 335 143 28 chr20 64934724 64935800 -7218082 + L2 LINE L2 1358 2557 -757 481 262 74 93 chr20 64935851 64936032 -7217850 + L1ME3A LINE L1 5454 5637 -533 2005 134 3 3 chr20 64936032 64936345 -7217537 + AluSx SINE Alu 1 313 0 262 0 0 0 chr20 64936316 64936381 -7217501 + (TAA)n Simple_repeat Simple_repeat 2 66 0 481 262 74 93 chr20 64936345 64936723 -7217159 + L1ME3A LINE L1 5637 5969 -201 3248 187 38 31 chr20 64936830 64937615 -7216267 + Ricksha_b DNA DNA 59 849 -405 2073 151 3 0 chr20 64937615 64937913 -7215969 - AluSx SINE Alu -13 299 1 1504 176 18 14 chr20 64937913 64938278 -7215604 + Ricksha_b DNA DNA 1317 1640 -13 271 285 26 7 chr20 64938428 64938579 -7215303 + (TA)n Simple_repeat Simple_repeat 1 154 0 296 339 85 45 chr20 64938606 64939092 -7214790 + L2 LINE L2 2766 3275 -38 27 29 0 0 chr20 64940902 64940936 -7212946 + AT_rich Low_complexity Low_complexity 1 34 0 1247 258 79 23 chr20 64942142 64942674 -7211208 - L1ME1 LINE L1 -95 6071 5510 495 266 7 0 chr20 64942674 64942813 -7211069 + L1M4 LINE L1 3716 3855 -2291 830 338 127 15 chr20 64942826 64943413 -7210469 - L2 LINE L2 0 3313 2657 3328 72 0 0 chr20 64945302 64945744 -7208138 + L1PA13 LINE L1 5722 6163 0 234 0 0 0 chr20 64945818 64945844 -7208038 + (TG)n Simple_repeat Simple_repeat 1 26 0 441 321 6 24 chr20 64945903 64946416 -7207466 + C-rich Low_complexity Low_complexity 1 503 0 267 251 0 43 chr20 64946453 64946616 -7207266 + C-rich Low_complexity Low_complexity 4 159 0 2372 104 0 0 chr20 64946746 64947054 -7206828 - AluSx SINE Alu -4 308 1 276 298 93 39 chr20 64947075 64947280 -7206602 + L2 LINE L2 2967 3182 -131 334 250 0 22 chr20 64947311 64947403 -7206479 - L1MC4 LINE L1 -1339 6703 6614 364 171 28 33 chr20 64947433 64947614 -7206268 + (TA)n Simple_repeat Simple_repeat 1 180 0 312 268 8 0 chr20 64947714 64947841 -7206041 + (TA)n Simple_repeat Simple_repeat 1 128 0 1097 265 142 35 chr20 64949142 64949678 -7204204 + MLT1E LTR MaLR 1 593 0 360 0 0 0 chr20 64949690 64949730 -7204152 + (CA)n Simple_repeat Simple_repeat 2 41 0 681 120 7 106 chr20 64949927 64950069 -7203813 - FRAM SINE Alu 0 40 1 293 301 62 48 chr20 64950562 64950771 -7203111 + MIR SINE MIR 20 231 -31 2194 126 3 0 chr20 64952026 64952327 -7201555 + AluSx SINE Alu 1 302 -10 207 182 45 0 chr20 64952996 64953040 -7200842 + L2 LINE L2 3268 3313 0 5668 156 22 5 chr20 64954553 64955831 -7198051 - L1P4 LINE L1 -608 5555 4252 1594 201 10 3 chr20 64955832 64956220 -7197662 + L1P LINE L1 2866 3256 -2890 2362 72 0 23 chr20 64956406 64956713 -7197169 + AluY SINE Alu 3 302 -9 1296 184 17 63 chr20 64956713 64956844 -7197038 + L1PB4 LINE L1 5823 5958 -198 1924 160 3 3 chr20 64956844 64957150 -7196732 + AluJb SINE Alu 1 306 -6 1296 184 17 63 chr20 64957150 64957365 -7196517 + L1PB4 LINE L1 5958 6153 -3 1025 138 0 0 chr20 64957474 64957619 -7196263 + AluSq/x SINE Alu 1 145 -167 398 357 112 5 chr20 64957725 64957921 -7195961 - MIR SINE MIR -45 217 1 300 290 72 43 chr20 64957921 64958059 -7195823 + MIR SINE MIR 65 206 -56 201 309 0 0 chr20 64958317 64958372 -7195510 + MIR SINE MIR 66 120 -142 436 307 73 13 chr20 64958510 64958660 -7195222 - MIR3 SINE MIR -13 195 37 498 251 167 23 chr20 64958868 64959083 -7194799 + LTR16C LTR ERVL 154 399 -92 199 369 41 26 chr20 64959141 64959336 -7194546 + L2 LINE L2 1051 1248 -2066 228 249 68 140 chr20 64959405 64959626 -7194256 - L2 LINE L2 -65 3248 3044 494 348 208 20 chr20 64959693 64960435 -7193447 + L2 LINE L2 1983 2863 -451 3972 145 21 11 chr20 64960653 64961355 -7192527 + MSTA-int LTR MaLR 942 1650 -1 2358 143 27 7 chr20 64961358 64961765 -7192117 + MSTA LTR MaLR 3 417 -11 380 276 10 0 chr20 64961768 64961866 -7192016 + L1M2c LINE L1 1375 1473 -5316 1778 168 0 50 chr20 64962299 64962623 -7191259 + AluSx SINE Alu 1 309 0 4625 18 0 0 chr20 64963018 64963580 -7190302 + L1P LINE L1 4477 5038 -1108 602 261 90 36 chr20 64963683 64963793 -7190089 + L1MEc LINE L1 862 965 -5431 865 226 103 0 chr20 64963793 64963988 -7189894 - MER58C DNA MER1_type 0 215 1 602 261 90 36 chr20 64963988 64964321 -7189561 + L1MEc LINE L1 965 1329 -5067 301 240 70 35 chr20 64964339 64964510 -7189372 + L1MEc LINE L1 1408 1584 -4812 196 269 6 6 chr20 64964639 64964799 -7189083 + (TTA)n Simple_repeat Simple_repeat 2 161 0 188 274 89 52 chr20 64965373 64965508 -7188374 - L2 LINE L2 -52 3220 3081 240 281 206 31 chr20 64965821 64965906 -7187976 - MIR SINE MIR -1 261 192 893 183 25 35 chr20 64965906 64966108 -7187774 - MER105 DNA DNA 0 204 5 240 281 206 31 chr20 64966108 64966182 -7187700 - MIR SINE MIR -70 192 74 1956 100 4 0 chr20 64966302 64966552 -7187330 + AluSx SINE Alu 34 284 -28 6039 95 23 6 chr20 64967196 64968617 -7185265 + L1PA10 LINE L1 4729 6166 -2 3284 151 22 10 chr20 64968618 64969196 -7184686 + L1PA16 LINE L1 5573 6157 -9 21 57 0 0 chr20 64969363 64969398 -7184484 + AT_rich Low_complexity Low_complexity 1 35 0 352 235 42 0 chr20 64969460 64969554 -7184328 - MER5A DNA MER1_type -87 102 4 318 267 118 0 chr20 64970337 64970572 -7183310 - L1MC/D LINE L1 -748 5398 5240 318 226 48 12 chr20 64970574 64970658 -7183224 - L1MC/D LINE L1 -938 5208 5122 189 0 0 0 chr20 64970756 64970777 -7183105 + (T)n Simple_repeat Simple_repeat 1 21 0 234 296 98 23 chr20 64972010 64972142 -7181740 - L2 LINE L2 -489 2825 2684 224 345 29 22 chr20 64972148 64972287 -7181595 + MIR SINE MIR 119 258 -4 257 321 19 9 chr20 64972299 64972405 -7181477 + L2 LINE L2 3158 3264 -49 386 309 29 29 chr20 64972534 64972673 -7181209 + L2 LINE L2 3134 3272 0 291 341 73 0 chr20 64972751 64972874 -7181008 + L2 LINE L2 3180 3311 -2 253 314 12 0 chr20 64973366 64973452 -7180430 + GA-rich Low_complexity Low_complexity 1 87 0 2055 138 3 3 chr20 64973588 64973886 -7179996 + AluSx SINE Alu 1 298 -14 242 213 0 0 chr20 64974537 64974584 -7179298 + (CATA)n Simple_repeat Simple_repeat 1 47 0 704 272 63 5 chr20 64974614 64974820 -7179062 + MER20 DNA MER1_type 1 218 -1 2254 98 0 0 chr20 64976066 64976351 -7177531 - AluSc SINE Alu -24 285 1 2948 174 23 77 chr20 64976493 64977035 -7176847 - L1MA10 LINE L1 -2 6332 5845 2038 88 0 4 chr20 64977035 64977309 -7176573 - AluYa5 SINE Alu 0 311 39 2948 174 23 77 chr20 64977309 64977555 -7176327 - L1MA10 LINE L1 -489 5845 5587 26 30 0 0 chr20 64978032 64978065 -7175817 + AT_rich Low_complexity Low_complexity 1 33 0 6503 164 26 21 chr20 64978472 64979744 -7174138 + Tigger1 DNA MER2_type 1 1278 -1140 862 136 27 0 chr20 64979745 64979892 -7173990 - L1PA15 LINE L1 -2 6163 6013 1967 203 20 0 chr20 64979894 64980284 -7173598 - L1PA13 LINE L1 -6387 400 3 5785 146 51 19 chr20 64980297 64981404 -7172478 + Tigger1 DNA MER2_type 1277 2418 0 203 349 36 12 chr20 64981711 64981794 -7172088 - L3 LINE CR1 -7 1570 1486 223 328 47 0 chr20 64983057 64983121 -7170761 + L2 LINE L2 2996 3062 -210 368 288 216 0 chr20 64983757 64983910 -7169972 + MER5A DNA MER1_type 4 189 0 447 343 56 26 chr20 64984699 64984932 -7168950 - MIR SINE MIR 0 262 23 1428 267 73 58 chr20 64984943 64985389 -7168493 - L1ME LINE L1 -4692 1388 950 1981 123 43 10 chr20 64985389 64985689 -7168193 - AluSx SINE Alu -2 310 1 1428 267 73 58 chr20 64985689 64986349 -7167533 - L1ME LINE L1 -5130 950 257 1901 161 3 0 chr20 64986349 64986648 -7167234 - AluSx SINE Alu -12 300 1 1428 267 73 58 chr20 64986648 64986907 -7166975 - L1ME LINE L1 -5823 257 3 984 272 36 38 chr20 64987403 64987852 -7166030 + MLT1E LTR MaLR 96 525 -68 367 299 10 0 chr20 64988364 64988461 -7165421 + MER5A DNA MER1_type 8 105 -84 337 281 12 0 chr20 64988884 64988966 -7164916 + MER5B DNA MER1_type 59 141 -37 459 242 211 0 chr20 64989061 64989222 -7164660 + MER58A DNA MER1_type 27 221 -3 827 227 70 0 chr20 64989633 64989805 -7164077 + MER5A DNA MER1_type 3 186 -3 187 30 30 30 chr20 64990447 64990480 -7163402 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 1853 198 84 41 chr20 64990627 64991341 -7162541 - L1M LINE L1 -743 5403 4673 3953 86 31 4 chr20 64991343 64992082 -7161800 + L1P3 LINE L1 4776 5531 -623 * 10256 134 31 30 chr20 64992055 64994194 -7159688 + L1P2 LINE L1 10 2173 -4288 581 86 0 0 chr20 64994181 64994262 -7159620 - L1P2 LINE L1 -1694 4767 4687 * 6818 90 3 32 chr20 64994260 64995117 -7158765 + L1P2 LINE L1 4764 5589 -881 2945 6 0 0 chr20 64995117 64995435 -7158447 + AluYb8 SINE Alu 1 318 0 6818 90 3 32 chr20 64995435 64995808 -7158074 + L1P2 LINE L1 5589 5971 -499 4914 228 43 3 chr20 65045811 65047169 -7106713 + L1 LINE L1 2998 4410 -1736 203 203 29 29 chr20 65047312 65047381 -7106501 + (TAA)n Simple_repeat Simple_repeat 1 69 0 294 243 100 14 chr20 65047846 65047986 -7105896 - L1ME LINE L1 -264 5857 5706 785 195 7 7 chr20 65047986 65048140 -7105742 + MLT1A1 LTR MaLR 1 154 -211 1168 208 127 0 chr20 65048142 65048474 -7105408 + L1PB4 LINE L1 5782 6155 -1 379 158 12 58 chr20 65048668 65048839 -7105043 + (CATATA)n Simple_repeat Simple_repeat 6 168 0 401 247 0 0 chr20 65049450 65049531 -7104351 + MIR SINE MIR 111 191 -71 511 160 0 21 chr20 65049583 65049677 -7104205 - AluJb SINE Alu -22 290 199 1248 254 48 8 chr20 65049785 65050179 -7103703 + Charlie1 DNA MER1_type 1423 1832 -929 226 278 0 0 chr20 65050186 65050240 -7103642 + L2 LINE L2 2440 2493 -821 311 225 0 56 chr20 65050245 65050334 -7103548 + L2 LINE L2 2637 2720 -594 1547 175 171 25 chr20 65050339 65050784 -7103098 + Charlie1 DNA MER1_type 1840 2349 -412 1203 204 26 0 chr20 65050786 65051012 -7102870 + AluJo SINE Alu 3 234 -78 353 206 137 20 chr20 65051012 65051114 -7102768 - MSTC LTR MaLR -314 114 1 683 246 131 20 chr20 65051312 65051511 -7102371 + MER58A DNA MER1_type 4 224 0 22 0 0 0 chr20 65051523 65051545 -7102337 + AT_rich Low_complexity Low_complexity 1 22 0 379 322 32 11 chr20 65051595 65051885 -7101997 - L1MC/D LINE L1 -526 5595 5476 2263 107 0 0 chr20 65051898 65052196 -7101686 + AluSg SINE Alu 1 298 -12 2246 107 0 10 chr20 65052456 65052766 -7101116 - AluSq SINE Alu 0 313 7 531 178 7 118 chr20 65052905 65053040 -7100842 - MER82 DNA MER2_type -533 120 1 1534 254 50 36 chr20 65053048 65053775 -7100107 + L1M4 LINE L1 2304 3040 -3106 3262 81 2 0 chr20 65053800 65054244 -7099638 + L1P LINE L1 4 448 -5698 205 322 53 66 chr20 65056327 65056479 -7097403 - L2 LINE L2 -840 2474 2325 349 250 63 9 chr20 65056723 65056904 -7096978 - MLT1H LTR MaLR -301 248 54 800 357 111 22 chr20 65057559 65058408 -7095474 - L2 LINE L2 -570 2744 1821 339 266 8 59 chr20 65058998 65059251 -7094631 + L1MEc LINE L1 2167 2366 -3849 1360 245 41 8 chr20 65059258 65059621 -7094261 - MER82 DNA MER2_type -7 646 272 2122 251 109 35 chr20 65059738 65060044 -7093838 - L1MEc LINE L1 -1796 4419 4137 198 0 0 0 chr20 65060044 65060066 -7093816 + (ATG)n Simple_repeat Simple_repeat 2 23 0 2387 46 0 3 chr20 65060068 65060352 -7093530 - AluY SINE Alu -28 283 1 2122 251 109 35 chr20 65060352 65061017 -7092865 - L1MEc LINE L1 -2078 4137 3373 307 326 128 14 chr20 65062022 65062163 -7091719 - MIR SINE MIR -16 246 90 183 348 52 26 chr20 65062655 65062770 -7091112 - MIR3 SINE MIR -54 154 37 2292 102 3 3 chr20 65062878 65063183 -7090699 - AluSc SINE Alu -4 305 1 324 228 31 47 chr20 65064319 65064446 -7089436 + MER3 DNA MER1_type 22 146 -63 343 307 99 65 chr20 65064468 65064708 -7089174 - L1MEc LINE L1 -4167 2229 1976 5078 36 2 0 chr20 65064708 65065314 -7088568 - L1PA4 LINE L1 -1 6154 5548 343 307 99 65 chr20 65065314 65065366 -7088516 - L1MEc LINE L1 -4420 1976 1927 1638 99 20 4 chr20 65065503 65065756 -7088126 + MER41A LTR ERV1 296 552 -2 520 207 27 0 chr20 65065785 65065896 -7087986 + MER81 DNA DNA 1 114 0 1723 200 91 45 chr20 65067141 65067960 -7085922 + L1MC/D LINE L1 4696 5538 -783 219 69 0 0 chr20 65068121 65068150 -7085732 + (CA)n Simple_repeat Simple_repeat 2 30 0 22 0 0 0 chr20 65068286 65068308 -7085574 + AT_rich Low_complexity Low_complexity 1 22 0 2240 104 7 0 chr20 65069452 65069751 -7084131 + AluSg SINE Alu 2 302 -8 1669 144 0 0 chr20 65070543 65070779 -7083103 + AluSg SINE Alu 1 236 -74 4879 186 11 6 chr20 65070879 65071813 -7082069 - MSTA-int LTR MaLR -713 938 1 1740 168 70 0 chr20 65071813 65072129 -7081753 - MSTA LTR MaLR 0 428 91 1062 240 156 39 chr20 65074640 65075177 -7078705 + MLT1E1 LTR MaLR 55 654 0 585 139 30 0 chr20 65075279 65075380 -7078502 + L1MDa LINE L1 38 141 -6399 1548 118 4 0 chr20 65075380 65075609 -7078273 - MER4B LTR ERV1 0 610 381 210 200 0 20 chr20 65075894 65075944 -7077938 + (TA)n Simple_repeat Simple_repeat 1 49 0 294 29 0 0 chr20 65075976 65076011 -7077871 + (TG)n Simple_repeat Simple_repeat 2 36 0 218 215 37 84 chr20 65078484 65078591 -7075291 - MIR SINE MIR -59 203 102 4604 106 50 23 chr20 65078711 65079317 -7074565 - Tigger1 DNA MER2_type -1589 829 196 1961 138 41 0 chr20 65079317 65079607 -7074275 + AluSx SINE Alu 1 302 -10 4604 106 50 23 chr20 65079607 65079776 -7074106 - Tigger1 DNA MER2_type -2222 196 33 272 273 23 11 chr20 65080061 65080149 -7073733 + MER81 DNA DNA 26 114 0 295 244 24 0 chr20 65080191 65080273 -7073609 - L1ME LINE L1 -312 5809 5726 21 0 0 0 chr20 65080273 65080294 -7073588 + AT_rich Low_complexity Low_complexity 1 21 0 15357 32 0 0 chr20 65080421 65083129 -7070753 - L1PA3 LINE L1 -3 6152 3445 2285 59 70 0 chr20 65084111 65084398 -7069484 - AluY SINE Alu -2 309 3 465 254 0 8 chr20 65084408 65084526 -7069356 - MER3 DNA MER1_type -63 146 30 31 0 0 0 chr20 65085183 65085214 -7068668 + AT_rich Low_complexity Low_complexity 1 31 0 1945 151 0 3 chr20 65085219 65085503 -7068379 + AluSx SINE Alu 4 286 -26 261 210 0 0 chr20 65085532 65085594 -7068288 + (TG)n Simple_repeat Simple_repeat 2 63 0 243 331 131 15 chr20 65085606 65085736 -7068146 - L2 LINE L2 -27 3286 3142 1602 198 88 46 chr20 65085785 65086195 -7067687 + MLT1D LTR MaLR 20 446 -59 39925 31 35 1 chr20 65086195 65092088 -7061794 + L1HS LINE L1 4 6098 -57 1919 175 0 0 chr20 65092092 65092384 -7061498 - AluJb SINE Alu -18 294 3 27 0 0 0 chr20 65092386 65092413 -7061469 + AT_rich Low_complexity Low_complexity 1 27 0 319 271 90 32 chr20 65092562 65092717 -7061165 - HAL1b LINE L1 -943 405 242 1678 181 0 24 chr20 65093796 65094094 -7059788 - AluJo SINE Alu -17 295 5 193 336 19 37 chr20 65094248 65094355 -7059527 - L2 LINE L2 0 3272 3168 2211 87 0 0 chr20 65095167 65095465 -7058417 + L1PA7 LINE L1 5852 6149 -5 201 129 0 0 chr20 65095820 65095851 -7058031 + (CA)n Simple_repeat Simple_repeat 2 32 0 530 59 32 70 chr20 65095881 65096067 -7057815 + (TA)n Simple_repeat Simple_repeat 1 179 0 280 334 69 57 chr20 65096833 65096917 -7056965 + L2 LINE L2 2798 2879 -393 836 271 42 0 chr20 65096917 65097131 -7056751 + MER58A DNA MER1_type 2 224 0 280 334 69 57 chr20 65097131 65097430 -7056452 + L2 LINE L2 2879 3196 -76 424 300 87 13 chr20 65098914 65099064 -7054818 + L2 LINE L2 3112 3272 0 394 276 100 8 chr20 65099126 65099281 -7054601 + MIR SINE MIR 34 201 -61 336 125 38 50 chr20 65099282 65099362 -7054520 - MLT1F LTR MaLR 0 542 464 185 293 0 107 chr20 65099657 65099732 -7054150 + L2 LINE L2 3170 3236 -36 2447 76 0 0 chr20 65099741 65100044 -7053838 + AluY SINE Alu 1 303 -8 199 0 93 53 chr20 65100122 65100197 -7053685 + (CATAT)n Simple_repeat Simple_repeat 3 80 0 3096 156 171 32 chr20 65103369 65104094 -7049788 - LTR1B LTR ERV1 0 826 1 624 244 81 15 chr20 65104217 65104414 -7049468 - MER20 DNA MER1_type -9 210 1 361 235 26 17 chr20 65104900 65105015 -7048867 - MER33 DNA MER1_type -170 154 39 395 278 130 25 chr20 65105125 65105287 -7048595 - MIR SINE MIR 0 262 84 241 328 25 5 chr20 65106076 65106280 -7047602 + MER113 DNA MER1_type? 1 208 -313 249 252 152 20 chr20 65106749 65106900 -7046982 + MER113 DNA MER1_type? 337 507 -14 808 328 63 71 chr20 65107083 65107737 -7046145 + L1 LINE L1 2676 3317 -2829 2528 74 3 0 chr20 65107737 65108047 -7045835 + AluY SINE Alu 1 311 0 808 328 63 71 chr20 65108047 65108674 -7045208 + L1 LINE L1 3317 3947 -2199 208 253 222 0 chr20 65108962 65109061 -7044821 + MIR SINE MIR 132 252 -10 294 352 75 0 chr20 65111134 65111293 -7042589 - MLT1K LTR MaLR -415 173 3 316 267 67 60 chr20 65112965 65113115 -7040767 + MER5B DNA MER1_type 1 151 -27 308 233 0 14 chr20 65113633 65113706 -7040176 + Charlie1 DNA MER1_type 1486 1557 -1204 244 239 0 75 chr20 65113715 65113782 -7040100 - MER2 DNA MER2_type 0 345 284 * 611 274 0 0 chr20 65113759 65113912 -7039970 - MER8 DNA MER2_type -60 179 27 3449 187 49 55 chr20 65113923 65114230 -7039652 + MER21B LTR ERV1 1 308 -555 264 30 0 0 chr20 65114230 65114263 -7039619 + (CA)n Simple_repeat Simple_repeat 2 34 0 3449 187 49 55 chr20 65114263 65114814 -7039068 + MER21B LTR ERV1 308 854 -9 2214 247 70 9 chr20 65115001 65115743 -7038139 + Charlie1 DNA MER1_type 1563 2349 -412 204 337 31 0 chr20 65116339 65116437 -7037445 + L2 LINE L2 2636 2736 -578 374 290 9 28 chr20 65116442 65116549 -7037333 + L2 LINE L2 2895 2999 -314 960 294 63 0 chr20 65116710 65117043 -7036839 + MLT1H LTR MaLR 1 354 -195 234 222 0 0 chr20 65117257 65117302 -7036580 + L2 LINE L2 3193 3237 -35 237 273 0 39 chr20 65118281 65118358 -7035524 + CT-rich Low_complexity Low_complexity 3 76 0 360 230 0 22 chr20 65118374 65118513 -7035369 + CT-rich Low_complexity Low_complexity 3 138 0 247 310 10 5 chr20 65119498 65119648 -7034234 + L1ME LINE L1 5677 5824 -297 270 255 124 33 chr20 65119871 65120024 -7033858 + MIR SINE MIR 60 226 -36 2198 172 20 41 chr20 65120042 65120294 -7033588 - MLT1C LTR MaLR 0 446 226 2958 31 17 0 chr20 65120294 65120648 -7033234 - L1PA3 LINE L1 0 6155 5796 2198 172 20 41 chr20 65120648 65120870 -7033012 - MLT1C LTR MaLR -220 226 1 275 318 47 14 chr20 65121802 65121950 -7031932 - MLT1K LTR MaLR -64 524 372 250 268 45 45 chr20 65122194 65122306 -7031576 - MLT1K LTR MaLR -475 113 2 951 274 15 40 chr20 65122797 65123202 -7030680 - MLT2C1 LTR ERVL 0 397 3 2237 109 0 0 chr20 65123666 65123960 -7029922 - AluSg SINE Alu -15 295 2 495 318 37 5 chr20 65124156 65124345 -7029537 - L2 LINE L2 -1 3312 3118 34 24 0 0 chr20 65124369 65124410 -7029472 + AT_rich Low_complexity Low_complexity 1 41 0 293 165 66 66 chr20 65125382 65125473 -7028409 + MLT1E1 LTR MaLR 6 96 -558 * 1241 201 80 15 chr20 65125461 65125802 -7028080 + MLT1E1 LTR MaLR 221 566 -60 6569 70 17 0 chr20 65125802 65126411 -7027471 - L1PA7 LINE L1 0 6154 5543 2230 97 7 0 chr20 65126411 65126700 -7027182 + AluSq SINE Alu 1 291 -22 6569 70 17 0 chr20 65126700 65127090 -7026792 - L1PA7 LINE L1 -611 5543 5161 643 84 0 0 chr20 65127091 65127186 -7026696 + L1PA7 LINE L1 5055 5149 -997 444 259 54 49 chr20 65127529 65127734 -7026148 - MIR SINE MIR -4 258 53 306 0 0 0 chr20 65127840 65127874 -7026008 + (A)n Simple_repeat Simple_repeat 1 34 0 23 68 0 0 chr20 65127879 65127923 -7025959 + AT_rich Low_complexity Low_complexity 1 44 0 237 244 256 0 chr20 65128842 65128928 -7024954 - L2 LINE L2 -7 3306 3199 220 267 33 0 chr20 65128930 65128990 -7024892 - MIR SINE MIR -125 137 76 185 286 79 16 chr20 65128970 65129033 -7024849 + L2 LINE L2 3205 3271 -1 * 1037 194 51 0 chr20 65129269 65129465 -7024417 + MER58A DNA MER1_type 19 224 0 260 250 50 0 chr20 65129481 65129541 -7024341 - MIR SINE MIR -76 186 124 231 220 66 44 chr20 65129784 65129875 -7024007 - MER41E LTR ERV1 -62 450 358 985 189 64 16 chr20 65129884 65130133 -7023749 - LTR43 LTR ERV1 -166 436 176 22 35 0 0 chr20 65130585 65130614 -7023268 + AT_rich Low_complexity Low_complexity 1 29 0 261 327 10 0 chr20 65130743 65130844 -7023038 - Charlie8 DNA MER1_type -2187 230 129 426 315 88 29 chr20 65131064 65131483 -7022399 + Charlie7 DNA MER1_type 106 549 -2063 5913 194 10 5 chr20 65131490 65132875 -7021007 - L1 LINE L1 -1214 4932 3541 2905 127 9 2 chr20 65132875 65132965 -7020917 + L1PB1 LINE L1 5684 5772 -379 261 0 0 0 chr20 65132965 65132994 -7020888 + (TG)n Simple_repeat Simple_repeat 2 30 0 2905 127 9 2 chr20 65132994 65133367 -7020515 + L1PB1 LINE L1 5772 6151 0 2576 146 11 5 chr20 65133712 65134157 -7019725 + L1MB3 LINE L1 5723 6170 -13 2304 185 164 10 chr20 65134940 65135364 -7018518 - L1MB7 LINE L1 -25 6159 5802 2730 210 4 2 chr20 65135364 65135868 -7018014 - LTR10B LTR ERV1 0 505 1 2304 185 164 10 chr20 65135868 65136149 -7017733 - L1MB7 LINE L1 -382 5802 5353 433 293 64 20 chr20 65136265 65136514 -7017368 - L1ME3A LINE L1 -1 6169 5910 1818 181 0 0 chr20 65138080 65138362 -7015520 + AluSx SINE Alu 1 282 -30 24 85 0 0 chr20 65138372 65138431 -7015451 + AT_rich Low_complexity Low_complexity 1 59 0 439 134 39 39 chr20 65138431 65138610 -7015272 + (TATAA)n Simple_repeat Simple_repeat 1 179 0 183 111 32 48 chr20 65138638 65138701 -7015181 + (TATAG)n Simple_repeat Simple_repeat 4 65 0 412 139 35 30 chr20 65138725 65138960 -7014922 + (TATAG)n Simple_repeat Simple_repeat 1 236 0 682 101 58 0 chr20 65138963 65139220 -7014662 + (CTATA)n Simple_repeat Simple_repeat 1 272 0 348 75 25 69 chr20 65139247 65139406 -7014476 + (TA)n Simple_repeat Simple_repeat 1 152 0 670 87 0 82 chr20 65139421 65139616 -7014266 + (CTATA)n Simple_repeat Simple_repeat 2 180 0 1610 217 31 33 chr20 65140096 65140515 -7013367 - LTR52 LTR ERVL -3 418 1 192 238 0 0 chr20 65141331 65141394 -7012488 + (TATG)n Simple_repeat Simple_repeat 2 64 0 596 141 79 0 chr20 65141411 65141822 -7012060 + (TA)n Simple_repeat Simple_repeat 1 443 0 313 284 18 18 chr20 65141824 65141933 -7011949 - L1MC4 LINE L1 -1339 6703 6595 782 99 52 6 chr20 65141937 65142109 -7011773 + (TA)n Simple_repeat Simple_repeat 1 180 0 330 223 97 39 chr20 65142134 65142237 -7011645 - L1MC4 LINE L1 -1339 6703 6595 2085 118 7 26 chr20 65142960 65143265 -7010617 - AluSx SINE Alu -13 299 1 2267 79 0 0 chr20 65144559 65144850 -7009032 + AluY SINE Alu 1 291 -20 1826 155 0 50 chr20 65145669 65145991 -7007891 - AluJb SINE Alu -6 306 1 5004 199 167 44 chr20 65146416 65147930 -7005952 - MER52A LTR ERV1 0 1755 55 1279 302 147 29 chr20 65150090 65151219 -7002663 + L2 LINE L2 1961 3291 -22 239 287 78 62 chr20 65151867 65151996 -7001886 + MIR SINE MIR 108 238 -24 2054 121 25 0 chr20 65152673 65152954 -7000928 - AluSc SINE Alu -21 288 1 1290 260 68 37 chr20 65155311 65155822 -6998060 + MLT1E LTR MaLR 2 528 -65 1629 185 154 9 chr20 65155960 65156382 -6997500 + MLT1D LTR MaLR 23 505 0 611 199 65 126 chr20 65156988 65157219 -6996663 + MER20 DNA MER1_type 1 217 -2 426 280 8 8 chr20 65157953 65158078 -6995804 + MLT1J1 LTR MaLR 43 167 -279 373 214 71 0 chr20 65158285 65158369 -6995513 - L1MC4 LINE L1 -1339 6703 6614 331 311 0 0 chr20 65158293 65158383 -6995499 + L1MC4 LINE L1 6614 6703 -1339 * 2133 103 7 3 chr20 65158392 65158674 -6995208 - AluSp SINE Alu -30 283 1 1860 203 139 20 chr20 65158767 65159305 -6994577 - MLT1E2 LTR MaLR -24 602 1 488 301 26 0 chr20 65159777 65159933 -6993949 - MER117 DNA MER1_type -8 189 30 23 0 0 0 chr20 65160010 65160033 -6993849 + AT_rich Low_complexity Low_complexity 1 23 0 380 258 86 0 chr20 65161308 65161436 -6992446 + Charlie8 DNA MER1_type 41 179 -2238 361 293 0 0 chr20 65161579 65161661 -6992221 + MER5A DNA MER1_type 11 92 -97 1187 246 59 44 chr20 65162039 65162494 -6991388 + MLT1C LTR MaLR 6 467 0 199 194 0 0 chr20 65162494 65162530 -6991352 + MER5B DNA MER1_type 6 41 -137 413 183 204 78 chr20 65162609 65162751 -6991131 + MER5A DNA MER1_type 29 188 -1 295 261 122 17 chr20 65163824 65163939 -6989943 - MIR SINE MIR -64 198 72 300 344 72 0 chr20 65164261 65164386 -6989496 - L2 LINE L2 0 3313 3180 471 303 103 44 chr20 65164739 65165059 -6988823 + L2 LINE L2 2622 2960 -354 506 284 132 16 chr20 65165164 65165354 -6988528 + MIR SINE MIR 1 212 -50 535 234 57 63 chr20 65165707 65165882 -6988000 - MER58A DNA MER1_type -25 199 26 756 237 69 28 chr20 65165911 65166202 -6987680 + LTR37A LTR ERV1 47 349 -77 1440 126 9 19 chr20 65166204 65166419 -6987463 + AluSx SINE Alu 1 213 -99 653 118 0 0 chr20 65166464 65166584 -6987298 + AluSx SINE Alu 198 317 0 268 147 27 40 chr20 65166584 65166659 -6987223 + LTR37A LTR ERV1 353 426 0 184 300 20 0 chr20 65166978 65167028 -6986854 + L2 LINE L2 3252 3302 -11 203 138 0 0 chr20 65167216 65167245 -6986637 + (CA)n Simple_repeat Simple_repeat 1 29 0 2286 81 0 0 chr20 65167942 65168286 -6985596 + L1P LINE L1 2794 3137 -3009 21 36 0 0 chr20 65168377 65168405 -6985477 + AT_rich Low_complexity Low_complexity 1 28 0 2018 140 10 0 chr20 65168770 65169063 -6984819 + AluSq SINE Alu 1 296 -17 716 256 26 5 chr20 65169113 65169308 -6984574 + MER20 DNA MER1_type 19 217 -2 370 260 0 21 chr20 65169358 65169454 -6984428 + L1MC4 LINE L1 6610 6703 -1339 578 279 60 35 chr20 65169595 65169796 -6984086 - MIR SINE MIR -21 241 36 214 195 0 0 chr20 65170335 65170376 -6983506 + A-rich Low_complexity Low_complexity 1 41 0 35 0 0 0 chr20 65170933 65170968 -6982914 + AT_rich Low_complexity Low_complexity 1 35 0 239 266 211 16 chr20 65170968 65171096 -6982786 + MIR SINE MIR 110 262 0 343 305 219 7 chr20 65171135 65171286 -6982596 + MER5A DNA MER1_type 7 189 0 350 322 7 40 chr20 65171294 65171443 -6982439 + MIR SINE MIR 119 262 0 878 231 21 29 chr20 65171767 65172010 -6981872 - MLT1F LTR MaLR -2 565 325 892 225 3 5 chr20 65172023 65172226 -6981656 - MLT1F LTR MaLR -354 213 1 985 281 14 58 chr20 65173078 65173495 -6980387 + L2 LINE L2 2915 3313 0 25 0 0 0 chr20 65174546 65174571 -6979311 + AT_rich Low_complexity Low_complexity 1 25 0 244 365 84 6 chr20 65175214 65175381 -6978501 - MIR3 SINE MIR -9 199 20 254 305 85 12 chr20 65175512 65175594 -6978288 + MER5A DNA MER1_type 102 189 0 324 265 49 152 chr20 65176098 65176511 -6977371 + L2 LINE L2 2837 3198 -115 521 224 124 80 chr20 65176511 65176712 -6977170 - MER63A DNA MER1_type 0 210 1 324 265 49 152 chr20 65176712 65176766 -6977116 + L2 LINE L2 3198 3256 -57 457 176 19 0 chr20 65177319 65177427 -6976455 + L1PA15 LINE L1 5222 5331 -815 2273 97 0 42 chr20 65177428 65177739 -6976143 + AluSq SINE Alu 1 298 -15 4434 134 16 4 chr20 65177743 65178454 -6975428 + L1PA15 LINE L1 5446 6164 -1 341 258 31 47 chr20 65179920 65180048 -6973834 - MER5B DNA MER1_type -2 176 51 289 280 140 5 chr20 65180257 65180443 -6973439 - MER102b DNA MER1_type -23 318 108 1016 302 62 19 chr20 65180787 65181364 -6972518 - L2 LINE L2 -94 3219 2603 345 129 0 0 chr20 65182149 65182219 -6971663 + (TG)n Simple_repeat Simple_repeat 2 71 0 341 308 111 0 chr20 65182288 65182405 -6971477 - L2 LINE L2 -4 3309 3180 * 450 306 55 11 chr20 65182398 65182581 -6971301 - MIR SINE MIR 0 262 72 22 35 0 0 chr20 65183061 65183090 -6970792 + AT_rich Low_complexity Low_complexity 1 29 0 1761 163 50 50 chr20 65183630 65184029 -6969853 + MSTB LTR MaLR 1 399 -27 1992 136 0 17 chr20 65184053 65184347 -6969535 + AluSx SINE Alu 1 289 -23 2237 84 19 0 chr20 65184364 65184675 -6969207 - L1PA12 LINE L1 0 6168 5852 225 284 81 0 chr20 65184716 65184790 -6969092 + MIR SINE MIR 155 234 -28 1796 140 31 10 chr20 65184828 65185120 -6968762 - AluSx SINE Alu -14 298 1 542 313 153 33 chr20 65185120 65185675 -6968207 - L2 LINE L2 -7 3306 2681 261 208 56 28 chr20 65185765 65185837 -6968045 - MIR3 SINE MIR -11 197 124 238 319 11 11 chr20 65187806 65187897 -6965985 - MIR SINE MIR -145 117 27 1904 153 17 0 chr20 65188265 65188559 -6965323 + AluSx SINE Alu 1 299 -13 884 263 12 44 chr20 65189644 65189895 -6963987 + MIR SINE MIR 19 261 -1 189 393 80 0 chr20 65190181 65190293 -6963589 + MIR SINE MIR 36 156 -106 23 54 0 0 chr20 65190606 65190643 -6963239 + AT_rich Low_complexity Low_complexity 1 37 0 22 0 0 0 chr20 65191692 65191714 -6962168 + AT_rich Low_complexity Low_complexity 1 22 0 226 261 14 14 chr20 65192564 65192633 -6961249 + CT-rich Low_complexity Low_complexity 3 71 0 428 342 136 43 chr20 65192633 65193131 -6960751 - L2 LINE L2 -5 3267 2735 535 314 109 19 chr20 65193867 65194392 -6959490 + L1ME4a LINE L1 5539 6110 -11 1564 171 11 49 chr20 65194972 65195341 -6958541 + L1MA8 LINE L1 5903 6257 -34 29 28 0 0 chr20 65195354 65195390 -6958492 + AT_rich Low_complexity Low_complexity 1 36 0 186 277 198 20 chr20 65196557 65196658 -6957224 + MIR SINE MIR 134 252 -10 652 274 79 28 chr20 65196947 65197162 -6956720 - MIR SINE MIR -17 245 20 270 315 92 27 chr20 65198005 65198189 -6955693 - MIR SINE MIR -2 260 65 1679 193 105 73 chr20 65198336 65198938 -6954944 + MER74B LTR ERVL 1 621 -1 653 231 0 0 chr20 65199045 65199175 -6954707 + FLAM_A SINE Alu 1 130 -3 396 0 0 0 chr20 65199220 65199264 -6954618 + (TG)n Simple_repeat Simple_repeat 2 45 0 1026 188 26 26 chr20 65199360 65199626 -6954256 - L1MD3 LINE L1 0 7995 7730 2087 119 7 0 chr20 65200521 65200825 -6953057 + AluSc SINE Alu 1 306 0 2198 99 20 0 chr20 65201201 65201493 -6952389 + AluSq SINE Alu 1 298 -15 452 217 76 32 chr20 65201804 65201961 -6951921 + L1MC4a LINE L1 5709 5872 -1936 3321 128 49 31 chr20 65202007 65202156 -6951726 + MER7C DNA MER2_type 5 150 -2878 1836 135 21 4 chr20 65202156 65202437 -6951445 + AluSx SINE Alu 1 286 -26 3321 128 49 31 chr20 65202437 65202874 -6951008 + MER7C DNA MER2_type 150 602 0 2139 96 0 4 chr20 65203519 65203800 -6950082 + AluSp SINE Alu 22 301 -12 267 269 17 34 chr20 65204267 65204386 -6949496 + MER103 DNA DNA 3 119 -47 308 294 14 0 chr20 65204717 65204816 -6949066 + MIR SINE MIR 52 152 -56 2488 87 0 0 chr20 65204852 65205163 -6948719 + AluY SINE Alu 1 311 0 200 268 71 0 chr20 65205255 65205311 -6948571 + MIR SINE MIR 103 162 -100 1355 267 88 50 chr20 65206146 65206853 -6947029 + MER20B DNA MER1_type 34 767 -16 471 321 69 19 chr20 65208075 65208337 -6945545 + L2 LINE L2 3037 3311 -2 2574 49 0 0 chr20 65208495 65208799 -6945083 + AluY SINE Alu 1 304 -7 26 30 0 0 chr20 65209590 65209623 -6944259 + AT_rich Low_complexity Low_complexity 1 33 0 216 0 0 0 chr20 65211008 65211032 -6942850 + (GA)n Simple_repeat Simple_repeat 2 25 0 287 116 0 0 chr20 65211200 65211243 -6942639 - LTR16A1 LTR ERVL -1 456 414 438 302 52 57 chr20 65211343 65211591 -6942291 + MLT1K LTR MaLR 342 588 0 195 42 0 0 chr20 65212112 65212136 -6941746 + (CAAAAA)n Simple_repeat Simple_repeat 4 27 0 4311 120 60 17 chr20 65212395 65212551 -6941331 - L1PA16 LINE L1 -9 6157 6009 1795 118 4 4 chr20 65212551 65212797 -6941085 - AluSx SINE Alu -18 294 49 4311 120 60 17 chr20 65212797 65213356 -6940526 - L1PA16 LINE L1 -157 6009 5411 274 272 43 0 chr20 65213883 65213975 -6939907 - L1ME LINE L1 -272 5849 5754 653 248 13 0 chr20 65214909 65215062 -6938820 - MER45A DNA AcHobo 0 178 24 425 210 38 48 chr20 65215144 65215330 -6938552 + L1MA4A LINE L1 5937 6120 -183 332 179 28 65 chr20 65215331 65215383 -6938499 + L1MA4A LINE L1 6103 6102 -54 2189 135 114 5 chr20 65215383 65215768 -6938114 - MSTA LTR MaLR -1 427 1 332 179 28 65 chr20 65215768 65215823 -6938059 + L1MA4A LINE L1 6101 6156 0 229 257 14 0 chr20 65215894 65215968 -6937914 + MER116 DNA Mariner 6 80 0 598 293 49 34 chr20 65216289 65216613 -6937269 - MLT1J LTR MaLR -179 332 4 2069 136 7 7 chr20 65216627 65216929 -6936953 - AluSx SINE Alu -10 302 1 207 0 0 0 chr20 65217894 65217917 -6935965 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2278 68 0 0 chr20 65217921 65218202 -6935680 - AluY SINE Alu -29 282 2 241 268 144 10 chr20 65219041 65219138 -6934744 - L2 LINE L2 -3 3310 3201 961 218 87 69 chr20 65219442 65219777 -6934105 + MER58B DNA MER1_type 1 341 0 1336 197 50 62 chr20 65220157 65220316 -6933566 + MER96B DNA MER1_type 1 160 -257 474 18 0 0 chr20 65220316 65220371 -6933511 + (TA)n Simple_repeat Simple_repeat 1 55 0 1469 193 50 0 chr20 65220371 65220630 -6933252 - AluJb SINE Alu -20 292 21 1336 197 50 62 chr20 65220630 65220891 -6932991 + MER96B DNA MER1_type 158 417 0 433 237 34 59 chr20 65221530 65221648 -6932234 - MIR SINE MIR -117 145 31 364 252 49 41 chr20 65221803 65221926 -6931956 - MIR3 SINE MIR 0 208 85 33 0 0 0 chr20 65221973 65222006 -6931876 + AT_rich Low_complexity Low_complexity 1 33 0 752 246 94 66 chr20 65222685 65223062 -6930820 + MER20B DNA MER1_type 18 383 -400 1225 197 96 42 chr20 65223062 65223418 -6930464 - THE1C LTR MaLR 0 375 1 752 246 94 66 chr20 65223418 65223542 -6930340 + MER20B DNA MER1_type 383 502 -281 2732 85 0 0 chr20 65223542 65223896 -6929986 + THE1A LTR MaLR 2 355 0 11836 85 9 5 chr20 65223896 65225470 -6928412 + THE1A-int LTR MaLR 1 1580 0 2551 102 0 17 chr20 65225470 65225831 -6928051 + THE1A LTR MaLR 1 355 0 752 246 94 66 chr20 65225831 65225998 -6927884 + MER20B DNA MER1_type 501 768 -15 206 313 31 52 chr20 65226067 65226163 -6927719 - MIR3 SINE MIR -7 201 108 193 270 48 16 chr20 65226203 65226266 -6927616 + L3 LINE CR1 1237 1301 -276 186 43 0 0 chr20 65226317 65226340 -6927542 + (T)n Simple_repeat Simple_repeat 1 23 0 286 330 0 11 chr20 65227171 65227259 -6926623 + L2 LINE L2 3186 3272 0 201 276 31 141 chr20 65227263 65227426 -6926456 + L3 LINE CR1 1427 1571 -6 387 343 111 21 chr20 65227857 65228080 -6925802 - L2 LINE L2 -313 3000 2765 236 375 33 20 chr20 65229442 65229594 -6924288 + MER5B DNA MER1_type 3 156 -22 25 0 0 0 chr20 65229907 65229932 -6923950 + AT_rich Low_complexity Low_complexity 1 25 0 581 250 93 39 chr20 65230520 65230724 -6923158 + MIR SINE MIR 48 262 0 722 304 78 59 chr20 65230910 65231066 -6922816 - L2 LINE L2 0 3313 3161 2076 150 3 10 chr20 65231066 65231379 -6922503 + AluSx SINE Alu 1 311 -1 722 304 78 59 chr20 65231379 65231647 -6922235 - L2 LINE L2 -152 3161 2881 340 229 165 0 chr20 65231729 65231838 -6922044 - LTR16A LTR ERVL -20 430 304 2056 120 133 8 chr20 65231842 65232217 -6921665 + MSTA LTR MaLR 1 422 -6 618 307 37 37 chr20 65232221 65232521 -6921361 - LTR16A LTR ERVL -150 300 1 373 267 17 9 chr20 65232522 65232638 -6921244 + MER94 DNA DNA 6 122 -12 1228 254 27 27 chr20 65233355 65233765 -6920117 + Charlie4a DNA MER1_type 17 426 -82 2464 156 25 31 chr20 65234010 65234520 -6919362 - MER41B LTR ERV1 -9 597 130 183 80 0 0 chr20 65235043 65235068 -6918814 + (A)n Simple_repeat Simple_repeat 1 25 0 2396 93 68 0 chr20 65235349 65235702 -6918180 + MER51B LTR ERV1 1 377 0 416 209 109 0 chr20 65235709 65235819 -6918063 - MER94 DNA DNA -11 123 2 778 196 104 70 chr20 65236238 65236565 -6917317 + LTR37A LTR ERV1 89 426 0 650 214 82 13 chr20 65237413 65237572 -6916310 - MER45A DNA AcHobo -1 177 8 1951 226 75 40 chr20 65237635 65237716 -6916166 + MER72 LTR ERV1 1 78 -644 2519 59 0 3 chr20 65237716 65238019 -6915863 - AluY SINE Alu -9 302 1 1951 226 75 40 chr20 65238019 65238591 -6915291 + MER72 LTR ERV1 78 677 -45 993 150 0 0 chr20 65238593 65238753 -6915129 + L1PA10 LINE L1 6006 6165 -3 3209 117 74 25 chr20 65238772 65239300 -6914582 + MER41C LTR ERV1 1 554 0 279 185 0 0 chr20 65239378 65239432 -6914450 + MER72 LTR ERV1 669 722 0 2168 196 30 22 chr20 65239489 65239984 -6913898 - MLT1D LTR MaLR -6 499 1 451 185 33 0 chr20 65240447 65240539 -6913343 + MER53 DNA DNA 1 95 -94 751 220 103 84 chr20 65240868 65241204 -6912678 + MER110A LTR ERV1 145 468 0 2447 163 94 22 chr20 65241438 65241992 -6911890 - LTR49 LTR ERV1 -1 594 1 580 249 76 0 chr20 65242092 65242277 -6911605 + LTR37A LTR ERV1 1 199 -227 1967 189 41 14 chr20 65242277 65242671 -6911211 - MSTB LTR MaLR 0 426 19 3642 85 44 24 chr20 65242671 65243214 -6910668 + MER41A LTR ERV1 1 554 0 1967 189 41 14 chr20 65243214 65243232 -6910650 - MSTB LTR MaLR -407 19 3 639 239 40 9 chr20 65243237 65243459 -6910423 + LTR37A LTR ERV1 198 426 0 1143 190 71 45 chr20 65243525 65243958 -6909924 + MER67D LTR ERV1 2 509 -5 1896 161 0 13 chr20 65245022 65245320 -6908562 - AluSx SINE Alu -18 294 1 231 283 57 19 chr20 65245426 65245532 -6908350 - L2 LINE L2 -226 3046 2937 471 304 103 30 chr20 65245565 65245828 -6908054 - L2 LINE L2 -497 2817 2536 197 306 61 20 chr20 65246479 65246577 -6907305 + MER5A DNA MER1_type 86 187 -2 467 252 137 47 chr20 65247455 65247820 -6906062 + L1ME2 LINE L1 4303 4700 -1446 360 189 0 0 chr20 65247903 65247977 -6905905 + (TG)n Simple_repeat Simple_repeat 2 75 0 21 36 0 0 chr20 65248165 65248193 -6905689 + AT_rich Low_complexity Low_complexity 1 28 0 1265 150 42 8 chr20 65248322 65248562 -6905320 - THE1C LTR MaLR 0 375 128 1834 220 121 28 chr20 65248563 65249144 -6904738 + L1ME2 LINE L1 5443 6077 -87 722 246 17 110 chr20 65249149 65249503 -6904379 - MLT1D LTR MaLR -4 501 181 743 178 53 58 chr20 65249539 65249764 -6904118 - MLT1D LTR MaLR -281 224 1 309 234 13 0 chr20 65249767 65249844 -6904038 + L1ME2 LINE L1 6077 6154 -10 1602 181 65 0 chr20 65250035 65250373 -6903509 - L1P LINE L1 -904 5242 4883 1356 91 39 0 chr20 65250374 65250582 -6903300 + L1PA13 LINE L1 5948 6163 0 474 286 46 63 chr20 65251378 65251553 -6902329 - MIR SINE MIR -11 251 80 1883 149 18 6 chr20 65252046 65252375 -6901507 + L1PB3 LINE L1 5819 6151 -3 396 0 0 0 chr20 65253010 65253054 -6900828 + (CA)n Simple_repeat Simple_repeat 2 45 0 1277 226 11 35 chr20 65254007 65254375 -6899507 + L1ME2 LINE L1 5804 6162 -2 401 314 21 48 chr20 65254481 65254669 -6899213 + MIR SINE MIR 31 213 -49 27 0 0 0 chr20 65255296 65255323 -6898559 + AT_rich Low_complexity Low_complexity 1 27 0 306 326 18 92 chr20 65256007 65256045 -6897837 - L2 LINE L2 -3 3269 3230 826 235 51 24 chr20 65256045 65256300 -6897582 + MIR SINE MIR 1 262 0 306 326 18 92 chr20 65256300 65256479 -6897403 - L2 LINE L2 -42 3230 3068 859 210 73 5 chr20 65256659 65256864 -6897018 + MER20 DNA MER1_type 1 219 0 323 119 0 17 chr20 65257836 65257895 -6895987 + L1MA9 LINE L1 6254 6311 -1 909 156 5 96 chr20 65257928 65258088 -6895794 + L1MC1 LINE L1 6123 6259 -74 2241 122 3 3 chr20 65258088 65258400 -6895482 - AluSx SINE Alu 0 312 1 909 156 5 96 chr20 65258400 65258457 -6895425 + L1MC1 LINE L1 6259 6320 -13 314 400 7 0 chr20 65258501 65258636 -6895246 - MIR3 SINE MIR -6 202 67 1549 252 43 5 chr20 65258738 65259154 -6894728 - MER70B LTR ERVL -143 435 4 1952 245 67 8 chr20 65259166 65259676 -6894206 + MLT1E1 LTR MaLR 115 654 0 1812 211 81 72 chr20 65259973 65260650 -6893232 + L1MC5 LINE L1 6921 7611 -350 180 0 0 0 chr20 65260650 65260670 -6893212 + (CA)n Simple_repeat Simple_repeat 2 21 0 1812 211 81 72 chr20 65260670 65260940 -6892942 + L1MC5 LINE L1 7611 7877 -84 286 345 184 14 chr20 65261007 65261230 -6892652 + L2 LINE L2 2716 2976 -338 3091 97 59 22 chr20 65262403 65262643 -6891239 + L1PA11 LINE L1 5648 5878 -296 2180 119 3 7 chr20 65262643 65262953 -6890929 + AluSg1 SINE Alu 1 309 0 3091 97 59 22 chr20 65262953 65263219 -6890663 + L1PA11 LINE L1 5878 6173 -1 491 250 6 26 chr20 65263808 65263964 -6889918 + L1ME4a LINE L1 5737 5889 -232 241 203 141 0 chr20 65264593 65264657 -6889225 - L2 LINE L2 -2 3270 3198 22 56 0 0 chr20 65265094 65265130 -6888752 + AT_rich Low_complexity Low_complexity 1 36 0 254 221 32 32 chr20 65265159 65265313 -6888569 + (TATAA)n Simple_repeat Simple_repeat 2 155 0 30 27 0 0 chr20 65265320 65265357 -6888525 + AT_rich Low_complexity Low_complexity 1 37 0 30 27 0 0 chr20 65265380 65265417 -6888465 + AT_rich Low_complexity Low_complexity 1 37 0 271 228 22 50 chr20 65265431 65265611 -6888271 + (TATAA)n Simple_repeat Simple_repeat 1 175 0 235 133 67 15 chr20 65265635 65265770 -6888112 + (TA)n Simple_repeat Simple_repeat 2 143 0 284 178 46 24 chr20 65265765 65266100 -6887782 + (TTATA)n Simple_repeat Simple_repeat 1 342 0 23 0 0 0 chr20 65266100 65266123 -6887759 + AT_rich Low_complexity Low_complexity 1 23 0 218 333 0 24 chr20 65266266 65266392 -6887490 + GA-rich Low_complexity Low_complexity 4 126 0 501 218 35 124 chr20 65266574 65266776 -6887106 + MER5A DNA MER1_type 5 188 -1 924 213 64 35 chr20 65266987 65267336 -6886546 - MSTD LTR MaLR 0 396 1 301 307 138 16 chr20 65267386 65267575 -6886307 + L1M4 LINE L1 5569 5780 -398 206 237 0 0 chr20 65267676 65267714 -6886168 + (CA)n Simple_repeat Simple_repeat 2 39 0 2602 164 41 24 chr20 65267946 65268478 -6885404 - MER21A LTR ERV1 -15 916 376 1263 147 78 4 chr20 65268484 65268729 -6885153 - MER21A LTR ERV1 -668 263 1 182 191 21 0 chr20 65268800 65268847 -6885035 + GA-rich Low_complexity Low_complexity 2 49 0 214 329 13 81 chr20 65270260 65270334 -6883548 + MIR SINE MIR 89 150 -112 2354 103 0 0 chr20 65270334 65270634 -6883248 + AluSg SINE Alu 1 300 -10 214 329 13 81 chr20 65270634 65270708 -6883174 + MIR SINE MIR 150 227 -35 194 301 107 29 chr20 65271442 65271545 -6882337 + L2 LINE L2 2911 3021 -292 1968 78 31 51 chr20 65271552 65271846 -6882036 - AluSg1 SINE Alu -21 288 1 2232 238 67 41 chr20 65272754 65272882 -6881000 - L1ME1 LINE L1 -5 6161 6038 1945 148 62 11 chr20 65272882 65273239 -6880643 + THE1C LTR MaLR 1 375 0 2232 238 67 41 chr20 65273239 65274112 -6879770 - L1ME1 LINE L1 -128 6038 5129 2108 99 11 0 chr20 65274112 65274420 -6879462 - AluSq SINE Alu 0 311 1 237 200 0 33 chr20 65275580 65275640 -6878242 + MLT1F1 LTR MaLR 68 125 -442 1602 208 39 22 chr20 65275640 65276053 -6877829 + L1MD3 LINE L1 7404 7823 -172 362 291 103 47 chr20 65276507 65276720 -6877162 - MIR SINE MIR -6 256 32 227 288 72 24 chr20 65277215 65277340 -6876542 - L3b LINE CR1 -89 1494 1364 424 282 45 128 chr20 65277505 65277573 -6876309 + L2 LINE L2 2926 2998 -274 1750 152 173 14 chr20 65277573 65277942 -6875940 - MSTA LTR MaLR 0 428 1 9455 128 22 40 chr20 65277942 65279547 -6874335 - THE1C-int LTR MaLR 0 1580 4 1832 123 64 59 chr20 65279550 65279923 -6873959 - THE1C LTR MaLR 0 375 1 424 282 45 128 chr20 65279923 65280207 -6873675 + L2 LINE L2 2999 3253 -19 3078 136 18 16 chr20 65280300 65280845 -6873037 + L1MA8 LINE L1 5744 6289 -2 216 0 0 0 chr20 65280901 65280925 -6872957 + (A)n Simple_repeat Simple_repeat 1 24 0 880 209 48 0 chr20 65281751 65281938 -6871944 + MER58A DNA MER1_type 29 224 0 2062 114 4 0 chr20 65282214 65282494 -6871388 + AluSp SINE Alu 1 281 -32 180 97 0 0 chr20 65282497 65282528 -6871354 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 687 269 30 6 chr20 65283409 65283576 -6870306 - MER5B DNA MER1_type -6 172 2 231 234 75 28 chr20 65283645 65283752 -6870130 + MER113 DNA MER1_type? 5 116 -405 2525 52 0 3 chr20 65284130 65284437 -6869445 + AluY SINE Alu 1 306 -5 1240 165 9 28 chr20 65285425 65285637 -6868245 - AluJb SINE Alu -19 293 86 301 348 54 18 chr20 65285812 65285924 -6867958 - L2 LINE L2 -1 3271 3156 763 327 125 12 chr20 65287730 65288234 -6865648 - MLT1K LTR MaLR -5 583 23 21 71 0 0 chr20 65288235 65288277 -6865605 + AT_rich Low_complexity Low_complexity 1 42 0 190 316 13 25 chr20 65288860 65288939 -6864943 - L2 LINE L2 0 3313 3236 199 303 112 0 chr20 65289008 65289097 -6864785 - L2 LINE L2 -1076 2238 2140 235 265 146 69 chr20 65290249 65290509 -6863373 - L3 LINE CR1 -106 1471 1192 3341 75 4 9 chr20 65290510 65290964 -6862918 - L1PA10 LINE L1 -10 6158 5707 191 170 43 21 chr20 65291669 65291716 -6862166 - L2 LINE L2 -5 3267 3220 476 265 127 0 chr20 65291912 65292078 -6861804 - MIR SINE MIR -2 260 74 1515 224 93 50 chr20 65292085 65292589 -6861293 + MLT1H LTR MaLR 3 528 -21 33 43 0 0 chr20 65293612 65293659 -6860223 + AT_rich Low_complexity Low_complexity 1 47 0 249 214 71 18 chr20 65293811 65293867 -6860015 - MER91B DNA MER1_type -126 64 6 412 299 132 10 chr20 65293971 65294175 -6859707 - MIR SINE MIR -13 249 21 527 239 121 72 chr20 65294309 65294614 -6859268 - MER5C DNA MER1_type -2 322 3 183 129 0 0 chr20 65295129 65295160 -6858722 + (T)n Simple_repeat Simple_repeat 1 31 0 233 119 24 0 chr20 65295852 65295894 -6857988 + (CATA)n Simple_repeat Simple_repeat 4 46 0 1590 260 91 10 chr20 65295924 65296505 -6857377 - L1MC4 LINE L1 -193 7849 7222 278 114 0 0 chr20 65297839 65297883 -6855999 + MADE1 DNA Mariner 35 78 -2 462 313 143 31 chr20 65298139 65298465 -6855417 + L2 LINE L2 2727 3087 -226 201 244 0 0 chr20 65298814 65298855 -6855027 + GA-rich Low_complexity Low_complexity 4 44 0 196 306 16 0 chr20 65299578 65299640 -6854242 + MIR SINE MIR 59 121 -87 22 0 0 0 chr20 65299659 65299681 -6854201 + AT_rich Low_complexity Low_complexity 1 22 0 706 271 50 6 chr20 65299762 65299943 -6853939 + MER5A DNA MER1_type 1 189 0 301 244 53 11 chr20 65300774 65300927 -6852955 - MIR SINE MIR -45 217 12 663 307 32 26 chr20 65301356 65301695 -6852187 + MER102b DNA MER1_type 1 341 0 1267 172 19 0 chr20 65302139 65302354 -6851528 - MER20 DNA MER1_type 0 219 1 270 203 0 38 chr20 65302791 65302870 -6851012 + LTR67 LTR ERVL 479 554 -3 39 22 0 0 chr20 65303092 65303138 -6850744 + AT_rich Low_complexity Low_complexity 1 46 0 690 285 44 35 chr20 65304511 65304739 -6849143 + MIR SINE MIR 18 247 -15 297 380 31 0 chr20 65305042 65305171 -6848711 - L2 LINE L2 -8 3264 3132 594 122 0 26 chr20 65305301 65305416 -6848466 + (TCCA)n Simple_repeat Simple_repeat 2 113 0 470 348 67 56 chr20 65305416 65305633 -6848249 - L2 LINE L2 0 3272 3059 2338 119 0 0 chr20 65305633 65305944 -6847938 + AluSx SINE Alu 1 311 -1 470 348 67 56 chr20 65305944 65306393 -6847489 - L2 LINE L2 -213 3059 2596 498 248 66 7 chr20 65306409 65306546 -6847336 + MIR SINE MIR 117 261 -1 4586 102 12 89 chr20 65306651 65307543 -6846339 + L1PB2 LINE L1 5327 6150 -1 278 182 61 30 chr20 65307563 65307629 -6846253 - MIR SINE MIR -184 78 11 405 328 136 18 chr20 65307656 65307994 -6845888 - L1ME4a LINE L1 -210 5911 5534 247 164 229 0 chr20 65308277 65308338 -6845544 + MLT1E2 LTR MaLR 170 244 -382 1391 139 123 83 chr20 65309791 65310222 -6843660 - LTR7 LTR ERV1 -2 448 1 326 145 14 0 chr20 65310335 65310404 -6843478 + MER53 DNA DNA 108 177 -12 * 479 121 12 0 chr20 65310343 65310426 -6843456 - MER53 DNA DNA -105 84 1 275 294 55 9 chr20 65310799 65310908 -6842974 - LTR67 LTR ERVL 0 557 444 2368 101 3 0 chr20 65310940 65311248 -6842634 + AluSg SINE Alu 1 309 -1 42 77 0 0 chr20 65311638 65311729 -6842153 + AT_rich Low_complexity Low_complexity 1 91 0 418 332 50 5 chr20 65312829 65313028 -6840854 + MIR SINE MIR 6 213 -49 1753 170 42 24 chr20 65313057 65313393 -6840489 + MER2 DNA MER2_type 1 342 -2 361 212 42 76 chr20 65313979 65314097 -6839785 - MER5A DNA MER1_type 0 189 76 748 121 21 7 chr20 65314416 65314556 -6839326 + GA-rich Low_complexity Low_complexity 5 146 0 622 243 0 6 chr20 65314655 65314828 -6839054 + L1MD3 LINE L1 7715 7886 -109 724 135 0 23 chr20 65314862 65314995 -6838887 - L1MA4 LINE L1 0 6300 6171 490 338 0 7 chr20 65315155 65315306 -6838576 + MIR SINE MIR 111 260 -2 380 244 52 30 chr20 65315318 65315453 -6838429 + MIR SINE MIR 117 254 -8 858 318 103 12 chr20 65315691 65316198 -6837684 - MLT1K LTR MaLR -8 580 28 266 227 0 100 chr20 65316406 65316516 -6837366 - L2 LINE L2 -1 3312 3214 1885 226 50 13 chr20 65316537 65317104 -6836778 - L1MB7 LINE L1 -10 6174 5584 321 274 42 0 chr20 65317897 65317992 -6835890 - MLT1I LTR MaLR -268 141 43 15685 36 4 11 chr20 65320784 65323500 -6830382 - L1PA3 LINE L1 0 6155 3451 1283 285 185 36 chr20 65323791 65324525 -6829357 + L2 LINE L2 105 993 -2321 2524 119 8 16 chr20 65324525 65324903 -6828979 + THE1C LTR MaLR 1 375 0 1283 285 185 36 chr20 65324903 65325051 -6828831 + L2 LINE L2 993 1118 -2196 629 301 76 90 chr20 65325114 65325345 -6828537 + L2 LINE L2 2831 3064 -249 1320 136 44 4 chr20 65325345 65325573 -6828309 - L1MB5 LINE L1 -8 6166 5930 629 301 76 90 chr20 65325573 65325830 -6828052 + L2 LINE L2 3064 3312 -1 710 170 0 7 chr20 65326024 65326177 -6827705 + (TCCA)n Simple_repeat Simple_repeat 1 152 0 1844 304 49 38 chr20 65326317 65327048 -6826834 - L2 LINE L2 -337 2977 2239 463 275 167 0 chr20 65327100 65327384 -6826498 + L2 LINE L2 2711 3035 -278 7386 63 8 0 chr20 65327384 65329115 -6824767 - L1PA5 LINE L1 0 6154 4414 3845 44 4 0 chr20 65329115 65329617 -6824265 + L1PA5 LINE L1 3914 4417 -1729 262 282 126 39 chr20 65329751 65329854 -6824028 + L2 LINE L2 3201 3312 -1 3730 200 90 4 chr20 65329952 65330918 -6822964 - L1MB7 LINE L1 -1077 5069 4021 251 303 220 0 chr20 65330998 65331107 -6822775 + MIR SINE MIR 29 161 -101 313 244 12 0 chr20 65331109 65331191 -6822691 - LTR33A LTR ERVL -3 520 438 502 281 55 10 chr20 65332448 65332647 -6821235 + MLT1L LTR MaLR 174 381 -234 283 202 61 20 chr20 65332701 65332800 -6821082 + MLT1L LTR MaLR 496 598 -17 2342 64 37 0 chr20 65333119 65333414 -6820468 + AluY SINE Alu 1 306 -5 198 143 0 0 chr20 65333500 65333535 -6820347 + (TGAA)n Simple_repeat Simple_repeat 2 36 0 404 260 65 0 chr20 65333880 65334034 -6819848 + MER103 DNA DNA 1 164 -2 23 0 0 0 chr20 65334192 65334215 -6819667 + AT_rich Low_complexity Low_complexity 1 23 0 190 286 14 43 chr20 65334600 65334670 -6819212 - MIR SINE MIR -157 105 38 21 0 0 0 chr20 65334710 65334731 -6819151 + AT_rich Low_complexity Low_complexity 1 21 0 515 329 20 29 chr20 65335449 65335695 -6818187 - MIR SINE MIR -10 252 9 389 364 22 63 chr20 65335965 65336234 -6817648 - L2 LINE L2 -86 3186 2929 257 0 30 0 chr20 65336400 65336433 -6817449 + (TC)n Simple_repeat Simple_repeat 1 34 0 233 29 29 0 chr20 65336440 65336474 -6817408 + (TG)n Simple_repeat Simple_repeat 2 36 0 333 289 141 13 chr20 65338337 65338486 -6815396 + MIR SINE MIR 94 261 -1 961 146 121 58 chr20 65339712 65339918 -6813964 + MER20 DNA MER1_type 1 219 0 1281 251 141 53 chr20 65340053 65340546 -6813336 - MLT1E LTR MaLR 0 654 1 3031 175 18 28 chr20 65341297 65341373 -6812509 - L1PA16 LINE L1 -114 6052 5977 851 137 15 0 chr20 65341373 65341504 -6812378 - FLAM_C SINE Alu 0 133 1 3031 175 18 28 chr20 65341504 65342027 -6811855 - L1PA16 LINE L1 -189 5977 5459 417 164 0 0 chr20 65342025 65342098 -6811784 + L1 LINE L1 4889 4961 -1185 * 401 271 62 57 chr20 65342116 65342293 -6811589 + MIR SINE MIR 16 193 -69 622 248 43 7 chr20 65342436 65342577 -6811305 + MER45A DNA AcHobo 1 146 -32 2141 158 72 8 chr20 65342597 65342997 -6810885 - MSTB LTR MaLR 0 426 1 2105 111 3 40 chr20 65343010 65343334 -6810548 + AluSx SINE Alu 1 312 0 196 325 58 52 chr20 65344164 65344318 -6809564 + L2 LINE L2 48 202 -3112 1420 158 175 8 chr20 65344607 65344967 -6808915 + LTR37A LTR ERV1 7 426 0 477 196 0 36 chr20 65345449 65345617 -6808265 + (TA)n Simple_repeat Simple_repeat 1 162 0 744 287 66 61 chr20 65345867 65346209 -6807673 + L1ME4a LINE L1 5576 5924 -197 297 0 0 0 chr20 65346209 65346242 -6807640 + (CA)n Simple_repeat Simple_repeat 1 33 0 744 287 66 61 chr20 65346242 65346442 -6807440 + L1ME4a LINE L1 5924 6121 0 351 0 0 0 chr20 65346627 65346666 -6807216 + (T)n Simple_repeat Simple_repeat 1 39 0 183 156 0 0 chr20 65347248 65347280 -6806602 + (CATATA)n Simple_repeat Simple_repeat 5 36 0 393 264 180 25 chr20 65348447 65348686 -6805196 + MER102b DNA MER1_type 41 316 -25 1987 204 90 7 chr20 65348732 65349197 -6804685 - MLT1D LTR MaLR -1 504 1 221 304 146 51 chr20 65349576 65349752 -6804130 - MIR SINE MIR -32 230 42 405 321 85 48 chr20 65350345 65350697 -6803185 + L2 LINE L2 2531 2895 -419 2122 204 36 4 chr20 65351022 65351516 -6802366 - L1M4c LINE L1 -2432 3950 3441 2306 220 37 69 chr20 65351516 65352271 -6801611 - L1M4c LINE L1 -3267 3115 2385 1007 176 86 13 chr20 65352300 65352533 -6801349 - L1MC2 LINE L1 -37 6307 6058 1973 124 49 3 chr20 65352560 65352908 -6800974 - L1MA5 LINE L1 0 6300 5937 1214 257 171 25 chr20 65352912 65353440 -6800442 - L1M4c LINE L1 -4013 2371 1702 2436 88 0 0 chr20 65353440 65353748 -6800134 + AluY SINE Alu 1 308 -3 1214 257 171 25 chr20 65353748 65353963 -6799919 - L1M4c LINE L1 -4682 1702 1520 7012 194 36 13 chr20 65353963 65356385 -6797497 + L1MB1 LINE L1 3690 6168 0 303 283 111 0 chr20 65356395 65356494 -6797388 - MER5B DNA MER1_type -66 112 3 338 292 80 49 chr20 65357106 65357332 -6796550 - L1ME4a LINE L1 -176 5945 5713 241 288 134 42 chr20 65357614 65357920 -6795962 - L1ME4a LINE L1 -2211 5597 5264 1206 91 18 82 chr20 65358175 65358394 -6795488 - AluSq SINE Alu -7 306 102 1859 152 14 20 chr20 65358424 65358721 -6795161 + AluSx SINE Alu 5 299 -13 24 0 0 0 chr20 65358740 65358764 -6795118 + AT_rich Low_complexity Low_complexity 1 24 0 260 191 11 0 chr20 65359242 65359331 -6794551 + (TA)n Simple_repeat Simple_repeat 1 90 0 889 211 127 8 chr20 65359980 65360217 -6793665 - MER58B DNA MER1_type -28 313 49 389 305 109 43 chr20 65360886 65361234 -6792648 - L1ME4a LINE L1 -1310 4836 4466 274 91 0 0 chr20 65361516 65361560 -6792322 + L1PA3 LINE L1 6107 6150 -5 695 290 46 57 chr20 65361572 65361938 -6791944 + L1MC/D LINE L1 5342 5703 -2105 21 36 0 0 chr20 65361973 65362001 -6791881 + AT_rich Low_complexity Low_complexity 1 28 0 16172 29 0 0 chr20 65362385 65365039 -6788843 + L1PA3 LINE L1 3445 6098 -57 1898 175 0 0 chr20 65365043 65365335 -6788547 - AluJb SINE Alu -18 294 3 27 0 0 0 chr20 65365337 65365364 -6788518 + AT_rich Low_complexity Low_complexity 1 27 0 236 257 0 57 chr20 65365512 65365617 -6788265 - HAL1b LINE L1 -943 405 307 1657 181 0 24 chr20 65366746 65367044 -6786838 - AluJo SINE Alu -17 295 5 198 336 19 37 chr20 65367198 65367305 -6786577 - L2 LINE L2 0 3272 3168 2394 90 3 0 chr20 65369426 65369726 -6784156 + AluSg SINE Alu 1 301 -9 389 325 0 9 chr20 65369887 65370001 -6783881 + MIR SINE MIR 1 113 -149 488 138 0 0 chr20 65370614 65370694 -6783188 - L1MA5 LINE L1 0 6300 6221 2277 59 70 0 chr20 65371370 65371657 -6782225 - AluY SINE Alu -2 309 3 498 254 0 8 chr20 65371667 65371785 -6782097 - MER3 DNA MER1_type -63 146 30 31 0 0 0 chr20 65372442 65372473 -6781409 + AT_rich Low_complexity Low_complexity 1 31 0 1929 151 0 3 chr20 65372478 65372762 -6781120 + AluSx SINE Alu 4 286 -26 261 210 0 0 chr20 65372791 65372853 -6781029 + (TG)n Simple_repeat Simple_repeat 2 63 0 241 331 131 15 chr20 65372865 65372995 -6780887 - L2 LINE L2 -27 3286 3142 1735 188 90 49 chr20 65373044 65373454 -6780428 + MLT1D LTR MaLR 20 446 -59 42090 30 33 1 chr20 65373454 65379409 -6774473 + L1HS LINE L1 4 6155 0 237 83 0 0 chr20 65379410 65379446 -6774436 + (A)n Simple_repeat Simple_repeat 1 36 0 430 145 0 0 chr20 65379448 65379517 -6774365 + MLT1D LTR MaLR 435 503 -2 194 328 0 17 chr20 65379518 65379576 -6774306 - L2 LINE L2 -254 3059 3003 12594 196 40 31 chr20 65379581 65382758 -6771124 + L1PA16 LINE L1 1057 4282 -2587 2234 128 128 8 chr20 65382758 65383140 -6770742 - MSTA LTR MaLR 0 428 1 12594 196 40 31 chr20 65383140 65385743 -6768139 + L1PA16 LINE L1 4282 6860 -9 318 309 0 0 chr20 65385751 65385845 -6768037 - L1MC4 LINE L1 -1339 6703 6610 317 258 0 32 chr20 65385763 65385856 -6768026 + L1MC4 LINE L1 6614 6703 -1339 * 194 188 0 21 chr20 65385870 65385918 -6767964 + (TATATG)n Simple_repeat Simple_repeat 5 51 0 1114 288 60 23 chr20 65385918 65386359 -6767523 - L2 LINE L2 -302 3011 2556 319 308 81 56 chr20 65386371 65386569 -6767313 - L2 LINE L2 -609 2705 2503 986 301 42 32 chr20 65387335 65387767 -6766115 + MLT1K LTR MaLR 2 437 -151 2065 154 0 0 chr20 65389472 65389771 -6764111 - AluSx SINE Alu -13 299 1 417 341 17 17 chr20 65389791 65389964 -6763918 + MIR SINE MIR 10 182 -80 241 300 14 0 chr20 65390489 65390559 -6763323 + L3 LINE CR1 843 913 -664 2111 154 6 26 chr20 65390716 65391060 -6762822 - MER1B DNA MER1_type 0 337 1 235 150 25 0 chr20 65391423 65391463 -6762419 + MER94 DNA DNA 3 43 -91 475 186 0 0 chr20 65391594 65391680 -6762202 + L1MC4a LINE L1 7078 7163 -645 * 902 220 35 18 chr20 65391677 65391904 -6761978 + L1MB7 LINE L1 5935 6165 -19 1355 190 31 37 chr20 65391918 65392270 -6761612 + L1MC4a LINE L1 7146 7495 -313 1164 237 102 28 chr20 65392270 65392701 -6761181 + MLT1C LTR MaLR 1 463 -4 834 238 95 20 chr20 65392705 65392999 -6760883 + L1MC4a LINE L1 7491 7806 -2 1720 171 48 15 chr20 65393001 65393334 -6760548 + MER2 DNA MER2_type 1 344 0 24 0 0 0 chr20 65393340 65393364 -6760518 + AT_rich Low_complexity Low_complexity 1 24 0 558 329 95 5 chr20 65393477 65393699 -6760183 + MIR SINE MIR 15 256 -6 213 39 0 0 chr20 65393924 65393950 -6759932 + (A)n Simple_repeat Simple_repeat 1 26 0 213 348 120 11 chr20 65393953 65394137 -6759745 + L3 LINE CR1 1341 1544 -33 610 269 17 23 chr20 65395513 65395688 -6758194 - MIR SINE MIR -6 256 83 3193 21 0 0 chr20 65395789 65396161 -6757721 - L1PA3 LINE L1 0 6155 5784 301 215 21 11 chr20 65396471 65396564 -6757318 + (CATATA)n Simple_repeat Simple_repeat 2 95 0 949 208 86 84 chr20 65396872 65397324 -6756558 + LTR16A1 LTR ERVL 4 456 -1 339 237 141 66 chr20 65397450 65397648 -6756234 + L1 LINE L1 3625 3837 -2309 22 70 0 0 chr20 65397793 65397836 -6756046 + AT_rich Low_complexity Low_complexity 1 43 0 1260 191 62 67 chr20 65397887 65398274 -6755608 + MLT1B LTR MaLR 6 390 0 228 311 0 0 chr20 65398348 65398422 -6755460 + L1MC/D LINE L1 4536 4609 -1537 241 239 60 15 chr20 65398573 65398640 -6755242 + MIR SINE MIR 161 230 -32 357 275 124 57 chr20 65398649 65398801 -6755081 + L1MC/D LINE L1 4797 4937 -1209 2083 97 10 26 chr20 65398801 65399110 -6754772 + AluY SINE Alu 1 304 -7 357 275 124 57 chr20 65399110 65399237 -6754645 + L1MC/D LINE L1 4937 5092 -1054 262 111 0 0 chr20 65399440 65399476 -6754406 + tRNA-Arg-AGA tRNA tRNA 1 36 -40 2262 114 0 0 chr20 65399594 65399892 -6753990 - AluSg SINE Alu -12 298 1 379 322 32 11 chr20 65399905 65400195 -6753687 + L1MC/D LINE L1 5476 5774 -526 22 0 0 0 chr20 65400245 65400267 -6753615 + AT_rich Low_complexity Low_complexity 1 22 0 683 246 131 20 chr20 65400279 65400478 -6753404 - MER58A DNA MER1_type 0 224 4 21 82 0 0 chr20 65400929 65400978 -6752904 + AT_rich Low_complexity Low_complexity 1 49 0 288 222 0 0 chr20 65401839 65401911 -6751971 + (TA)n Simple_repeat Simple_repeat 2 73 0 390 331 73 63 chr20 65401911 65402058 -6751824 - L2 LINE L2 -4 3309 3165 2866 6 0 0 chr20 65402058 65402369 -6751513 - AluY SINE Alu 0 311 1 390 331 73 63 chr20 65402369 65402523 -6751359 - L2 LINE L2 -148 3165 3005 521 230 15 7 chr20 65402653 65402788 -6751094 + MLT1J2 LTR MaLR 9 144 -306 432 251 42 105 chr20 65403024 65403090 -6750792 - L2 LINE L2 -472 2842 2773 2241 110 7 0 chr20 65403090 65403390 -6750492 + AluSg SINE Alu 1 302 -8 432 251 42 105 chr20 65403390 65403514 -6750368 - L2 LINE L2 -541 2773 2664 514 330 19 19 chr20 65403775 65404017 -6749865 + MIR SINE MIR 17 261 -1 803 182 16 62 chr20 65404232 65404424 -6749458 - MER20 DNA MER1_type -1 218 36 1788 198 56 91 chr20 65404855 65405502 -6748380 - MLT1E3 LTR MaLR 0 624 1 25 0 0 0 chr20 65406051 65406076 -6747806 + AT_rich Low_complexity Low_complexity 1 25 0 1197 310 30 35 chr20 65406643 65407210 -6746672 + MLT1K LTR MaLR 22 585 -3 206 278 0 0 chr20 65407261 65407315 -6746567 + CT-rich Low_complexity Low_complexity 3 56 0 208 320 61 78 chr20 65407801 65408261 -6745621 + L2 LINE L2 2851 3302 -11 2710 74 0 6 chr20 65408261 65408614 -6745268 + L1PA8 LINE L1 5804 6154 -18 218 299 23 0 chr20 65408700 65408787 -6745095 + (TGGA)n Simple_repeat Simple_repeat 1 89 0 2349 104 3 0 chr20 65409424 65409731 -6744151 + AluSq SINE Alu 3 310 -3 331 288 68 34 chr20 65409836 65409954 -6743928 - MER5A DNA MER1_type -2 187 66 1720 153 29 42 chr20 65409955 65410268 -6743614 - AluJo SINE Alu -3 309 1 13833 125 47 9 chr20 65410930 65413040 -6740842 - Tigger1 DNA MER2_type -19 2399 191 1961 138 41 0 chr20 65413040 65413330 -6740552 + AluSx SINE Alu 1 302 -10 13833 125 47 9 chr20 65413330 65413528 -6740354 - Tigger1 DNA MER2_type -2227 191 2 373 306 19 0 chr20 65413737 65413845 -6740037 + MER81 DNA DNA 5 114 0 295 244 24 0 chr20 65413887 65413969 -6739913 - L1ME LINE L1 -312 5809 5726 21 0 0 0 chr20 65413969 65413990 -6739892 + AT_rich Low_complexity Low_complexity 1 21 0 42104 37 1 4 chr20 65414117 65420287 -6733595 - L1PA3 LINE L1 -3 6152 2 330 317 59 72 chr20 65420290 65420580 -6733302 - L1ME LINE L1 -430 5740 5455 748 229 64 0 chr20 65420690 65420908 -6732974 - L1MB7 LINE L1 0 6184 5953 480 209 38 0 chr20 65420946 65421051 -6732831 + MER81 DNA DNA 1 109 -5 562 282 91 27 chr20 65421436 65421656 -6732226 - MIR SINE MIR -10 252 19 629 324 60 69 chr20 65423307 65423836 -6730046 - L2 LINE L2 -4 3268 2737 832 199 24 53 chr20 65423846 65424052 -6729830 + MLT1D LTR MaLR 3 202 -303 728 188 23 134 chr20 65424129 65424305 -6729577 + MLT1D LTR MaLR 194 313 -192 5020 61 2 0 chr20 65424305 65424931 -6728951 + L1PA6 LINE L1 5517 6143 -11 728 188 23 134 chr20 65424931 65425105 -6728777 + MLT1D LTR MaLR 313 505 0 217 356 0 0 chr20 65425164 65425251 -6728631 - L2 LINE L2 -662 2652 2566 838 187 20 0 chr20 65425351 65425501 -6728381 - MER20 DNA MER1_type -58 161 9 1435 175 42 48 chr20 65426259 65426613 -6727269 - L1MB7 LINE L1 -5 6179 5828 1027 85 0 0 chr20 65426614 65426743 -6727139 - AluSg/x SINE Alu -9 303 175 491 146 0 36 chr20 65426745 65426855 -6727027 - L1MB7 LINE L1 -352 5822 5717 382 295 26 58 chr20 65426955 65427111 -6726771 - L2 LINE L2 0 3313 3163 180 317 59 40 chr20 65427122 65427223 -6726659 - L2 LINE L2 0 3313 3211 2031 125 0 48 chr20 65427343 65427655 -6726227 + AluSx SINE Alu 1 297 -15 340 264 154 70 chr20 65428172 65428399 -6725483 + MIR SINE MIR 10 255 -7 429 298 33 13 chr20 65428988 65429139 -6724743 + MIR SINE MIR 11 164 -98 213 189 0 122 chr20 65429232 65429306 -6724576 + L2 LINE L2 3241 3305 -8 3083 116 14 10 chr20 65429414 65429897 -6723985 + L1PB2 LINE L1 5660 6144 -7 1076 303 62 34 chr20 65430508 65431036 -6722846 - MLT1K LTR MaLR -2 586 44 839 241 81 56 chr20 65431325 65431919 -6721963 - L1MC5 LINE L1 -55 7906 7298 362 302 48 16 chr20 65432529 65432655 -6721227 - MIR SINE MIR -76 186 57 3762 114 11 0 chr20 65432688 65433234 -6720648 + MER41A LTR ERV1 1 552 -2 520 207 27 0 chr20 65433263 65433374 -6720508 + MER81 DNA DNA 1 114 0 218 247 62 52 chr20 65434669 65434745 -6719137 - MIR SINE MIR -57 205 126 871 198 85 33 chr20 65434745 65434957 -6718925 + MER58A DNA MER1_type 1 223 -1 218 247 62 52 chr20 65434957 65434977 -6718905 - MIR SINE MIR -136 126 108 1952 197 70 13 chr20 65435096 65435595 -6718287 - LTR27 LTR ERV1 0 501 3 239 313 124 26 chr20 65436190 65436455 -6717427 + L1MC/D LINE L1 5450 5740 -2068 860 130 213 17 chr20 65437061 65437291 -6716591 + MSTA LTR MaLR 1 275 -153 740 62 21 0 chr20 65437370 65437467 -6716415 - MLT2A2 LTR ERVL -354 99 1 324 120 0 0 chr20 65437609 65437659 -6716223 + (CA)n Simple_repeat Simple_repeat 2 51 0 209 246 193 0 chr20 65437976 65438033 -6715849 + L2 LINE L2 3246 3313 0 3091 207 40 44 chr20 65439045 65439533 -6714349 + MER82 DNA MER2_type 1 487 -166 2243 132 0 3 chr20 65439533 65439843 -6714039 + AluSx SINE Alu 1 309 -3 3091 207 40 44 chr20 65439843 65440010 -6713872 + MER82 DNA MER2_type 487 653 0 338 363 38 6 chr20 65440059 65440216 -6713666 - MIR SINE MIR -88 174 13 362 288 33 55 chr20 65441113 65441286 -6712596 + MIR SINE MIR 23 196 -66 617 346 10 0 chr20 65441413 65441621 -6712261 - MIR SINE MIR -38 224 15 243 0 0 0 chr20 65441668 65441695 -6712187 + (CAAA)n Simple_repeat Simple_repeat 1 27 0 256 309 154 37 chr20 65441835 65441997 -6711885 - L2 LINE L2 -562 2752 2572 276 381 52 0 chr20 65442747 65442881 -6711001 + MIR SINE MIR 48 188 -74 1038 299 43 45 chr20 65442975 65443460 -6710422 + MLT1K LTR MaLR 95 578 -10 2032 131 3 0 chr20 65443543 65443826 -6710056 + AluSq SINE Alu 1 284 -29 186 71 0 0 chr20 65443826 65443854 -6710028 + (CATA)n Simple_repeat Simple_repeat 2 29 0 228 333 21 58 chr20 65444280 65444427 -6709455 - MIR SINE MIR -65 143 20 5595 66 0 0 chr20 65444639 65445321 -6708561 - LTR8 LTR ERV1 -9 682 1 1238 148 30 43 chr20 65445392 65445678 -6708204 + L1PA16 LINE L1 5854 6130 -1 370 338 46 32 chr20 65445761 65445980 -6707902 + L1MC4a LINE L1 5669 5890 -1918 881 294 126 24 chr20 65446931 65447390 -6706492 + L2 LINE L2 2174 2679 -635 354 349 78 35 chr20 65447574 65447723 -6706159 + L2 LINE L2 2952 3093 -220 2091 115 3 20 chr20 65447723 65448027 -6705855 - AluSc SINE Alu -10 299 1 354 349 78 35 chr20 65448027 65448224 -6705658 + L2 LINE L2 3093 3313 0 198 328 8 88 chr20 65448232 65448357 -6705525 - L2 LINE L2 -18 3295 3181 282 322 103 21 chr20 65449856 65450089 -6703793 - L2 LINE L2 -796 2518 2267 278 260 142 12 chr20 65450431 65450600 -6703282 + MER113 DNA MER1_type? 67 257 -264 2307 142 59 31 chr20 65450643 65451150 -6702732 + MLT2A2 LTR ERVL 3 546 -8 670 207 118 49 chr20 65451480 65451683 -6702199 + MLT1C LTR MaLR 53 269 -198 799 301 61 0 chr20 65451697 65451943 -6701939 + MER113 DNA MER1_type? 261 521 0 1769 193 39 42 chr20 65452292 65452653 -6701229 + MER74A LTR ERVL 121 482 -76 5445 30 0 2 chr20 65452653 65453252 -6700630 - L1PA4 LINE L1 -3 6152 5555 1769 193 39 42 chr20 65453252 65453299 -6700583 + MER74A LTR ERVL 482 528 -30 407 295 38 43 chr20 65453510 65453657 -6700225 + MIR SINE MIR 12 159 -103 1905 216 6 8 chr20 65453657 65454023 -6699859 - MLT1A1 LTR MaLR 0 365 1 407 295 38 43 chr20 65454023 65454085 -6699797 + MIR SINE MIR 159 220 -42 7363 168 13 3 chr20 65454085 65456350 -6697532 - L1PB1 LINE L1 0 6151 3820 196 237 0 0 chr20 65456708 65456746 -6697136 - MIR SINE MIR -219 43 6 2181 158 33 0 chr20 65456922 65457258 -6696624 - MER7A DNA MER2_type 0 346 2 215 209 0 0 chr20 65457302 65457345 -6696537 + (CTATG)n Simple_repeat Simple_repeat 2 44 0 281 281 44 18 chr20 65457675 65457789 -6696093 + L2 LINE L2 2573 2689 -625 2128 116 3 0 chr20 65457825 65458109 -6695773 + AluSx SINE Alu 1 285 -27 311 293 0 10 chr20 65458117 65458203 -6695679 + L1MC4 LINE L1 6609 6695 -1347 2167 109 11 0 chr20 65458203 65458488 -6695394 + AluSx SINE Alu 2 289 -23 311 293 0 10 chr20 65458488 65458500 -6695382 + L1MC4 LINE L1 6695 6706 -1336 324 219 0 0 chr20 65458542 65458711 -6695171 + (TA)n Simple_repeat Simple_repeat 2 170 0 266 170 12 50 chr20 65458812 65459058 -6694824 + (TCTA)n Simple_repeat Simple_repeat 1 236 0 411 174 27 54 chr20 65459072 65459256 -6694626 + (TCTA)n Simple_repeat Simple_repeat 1 179 0 411 174 27 54 chr20 65459270 65459454 -6694428 + (TCTA)n Simple_repeat Simple_repeat 1 179 0 311 212 29 35 chr20 65459401 65459571 -6694311 + (CTAG)n Simple_repeat Simple_repeat 4 172 0 * 299 211 29 53 chr20 65459488 65459659 -6694223 + (TCTA)n Simple_repeat Simple_repeat 4 170 0 * 378 256 43 17 chr20 65459670 65459787 -6694095 - MIR SINE MIR -34 228 109 692 287 64 78 chr20 65459877 65460298 -6693584 - MLT1J LTR MaLR -96 415 1 454 304 231 23 chr20 65460357 65460826 -6693056 + L2 LINE L2 2705 3270 -2 261 79 0 0 chr20 65461171 65461183 -6692699 + (GGA)n Simple_repeat Simple_repeat 3 14 -26 2238 57 47 7 chr20 65461183 65461479 -6692403 + AluY SINE Alu 1 308 -3 261 79 0 0 chr20 65461479 65461504 -6692378 + (GGA)n Simple_repeat Simple_repeat 13 40 0 1878 238 45 43 chr20 65462063 65462575 -6691307 + LTR40a LTR ERVL 7 519 0 646 262 14 0 chr20 65463111 65463252 -6690630 + MER58A DNA MER1_type 30 172 -52 505 313 174 26 chr20 65463255 65463635 -6690247 + L2 LINE L2 2878 3313 0 256 326 12 0 chr20 65463638 65463724 -6690158 + L2 LINE L2 3227 3313 0 288 333 0 0 chr20 65463725 65463797 -6690085 + polypurine Low_complexity Low_complexity 4 75 0 1618 119 68 0 chr20 65464248 65464368 -6689514 + AluSg SINE Alu 1 111 -199 302 0 26 0 chr20 65464368 65464406 -6689476 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 1618 119 68 0 chr20 65464406 65464520 -6689362 + AluSg SINE Alu 111 251 -59 518 258 86 27 chr20 65464552 65464738 -6689144 + MIR SINE MIR 56 252 -10 621 231 118 20 chr20 65464822 65465017 -6688865 - MIR SINE MIR -24 238 25 647 226 13 32 chr20 65466780 65466935 -6686947 - L2 LINE L2 0 3313 3162 209 325 125 0 chr20 65466957 65467037 -6686845 - MER91B DNA MER1_type 0 190 101 * 285 273 169 39 chr20 65467004 65467158 -6686724 - MER91A DNA MER1_type -15 181 8 376 246 102 70 chr20 65467173 65467273 -6686609 - L2 LINE L2 -254 3059 2964 920 27 75 129 chr20 65467273 65467420 -6686462 + MER85 DNA T2_type 1 139 0 376 246 102 70 chr20 65467420 65467506 -6686376 - L2 LINE L2 -349 2964 2867 468 302 121 53 chr20 65467712 65468025 -6685857 - L2 LINE L2 -4 3309 3019 1930 215 13 15 chr20 65468025 65468421 -6685461 - MSTD LTR MaLR -1 395 1 468 302 121 53 chr20 65468421 65468654 -6685228 - L2 LINE L2 -294 3019 2714 1184 146 59 43 chr20 65468691 65468866 -6685016 - MER119 DNA MER1_type 0 583 401 773 178 16 23 chr20 65468866 65468995 -6684887 - FLAM_C SINE Alu -5 128 1 1184 146 59 43 chr20 65468995 65469072 -6684810 - MER119 DNA MER1_type -182 401 327 278 253 51 25 chr20 65469087 65469166 -6684716 - MER119 DNA MER1_type -501 82 2 210 330 55 11 chr20 65469928 65470019 -6683863 - MIR3 SINE MIR -112 96 2 288 298 142 28 chr20 65470338 65470479 -6683403 + MIR3 SINE MIR 11 167 -41 396 320 171 6 chr20 65470648 65470823 -6683059 + MIR SINE MIR 44 247 -15 545 276 16 0 chr20 65471023 65471150 -6682732 - MER94 DNA DNA -3 131 3 201 311 16 0 chr20 65471423 65471484 -6682398 + CT-rich Low_complexity Low_complexity 2 63 0 201 343 58 29 chr20 65472057 65472229 -6681653 - L2 LINE L2 -557 2757 2581 749 236 132 0 chr20 65472423 65472643 -6681239 - MIR SINE MIR 0 262 14 180 0 0 0 chr20 65472915 65472935 -6680947 + (T)n Simple_repeat Simple_repeat 1 20 0 407 209 20 85 chr20 65473622 65473775 -6680107 - L2 LINE L2 0 3313 3171 378 318 24 0 chr20 65474185 65474311 -6679571 + MLT1K LTR MaLR 456 584 -4 2305 135 22 19 chr20 65474515 65474829 -6679053 + THE1B LTR MaLR 1 318 -46 2298 143 31 17 chr20 65474829 65475187 -6678695 + THE1B LTR MaLR 2 364 0 2305 135 22 19 chr20 65475187 65475235 -6678647 + THE1B LTR MaLR 318 364 0 488 273 25 31 chr20 65475620 65475781 -6678101 - MLT1H LTR MaLR -387 162 3 628 270 226 48 chr20 65476110 65476525 -6677357 - LTR33 LTR ERVL -28 493 5 24 67 0 0 chr20 65476985 65477030 -6676852 + AT_rich Low_complexity Low_complexity 1 45 0 333 113 16 32 chr20 65477045 65477107 -6676775 + MLT1I LTR MaLR 343 403 -6 218 317 109 0 chr20 65477177 65477278 -6676604 - L2 LINE L2 -2 3311 3200 1455 203 227 48 chr20 65477326 65477434 -6676448 + MLT1E LTR MaLR 1 88 -505 2148 116 0 3 chr20 65477434 65477728 -6676154 - AluSg SINE Alu -17 293 1 1455 203 227 48 chr20 65477728 65478122 -6675760 + MLT1E LTR MaLR 88 593 0 613 269 23 59 chr20 65478126 65478345 -6675537 - MIR SINE MIR -36 226 16 201 239 0 0 chr20 65478374 65478420 -6675462 + L2 LINE L2 2715 2760 -554 731 248 48 9 chr20 65478500 65478710 -6675172 - MIR SINE MIR -43 219 2 212 303 67 34 chr20 65479426 65479545 -6674337 - MIR SINE MIR -32 230 108 416 333 58 33 chr20 65480196 65480439 -6673443 - MIR SINE MIR 0 262 14 25 75 0 0 chr20 65480566 65480619 -6673263 + AT_rich Low_complexity Low_complexity 1 53 0 345 270 27 27 chr20 65480702 65480813 -6673069 - L1MC4 LINE L1 -1317 6725 6615 619 221 15 14 chr20 65480820 65481100 -6672782 + (CATATA)n Simple_repeat Simple_repeat 1 280 0 245 294 0 43 chr20 65481101 65481193 -6672689 + L1MC4 LINE L1 6615 6702 -1340 356 263 17 0 chr20 65481196 65481314 -6672568 + (TATATG)n Simple_repeat Simple_repeat 2 121 0 234 241 0 0 chr20 65481319 65481373 -6672509 - L1MC4 LINE L1 -1340 6702 6649 270 240 0 62 chr20 65481386 65481482 -6672400 - L1MC4 LINE L1 -1339 6703 6614 * 395 254 27 49 chr20 65481466 65481651 -6672231 + L1MC5 LINE L1 7731 7911 -50 3312 189 94 0 chr20 65482014 65482650 -6671232 - L1MB5 LINE L1 -1 6173 5478 2123 134 0 3 chr20 65482686 65482978 -6670904 + AluSx SINE Alu 1 291 -21 233 310 147 17 chr20 65483006 65483122 -6670760 + L2 LINE L2 3137 3267 -5 594 251 97 37 chr20 65483251 65483509 -6670373 + L2 LINE L2 2743 3002 -311 295 221 29 15 chr20 65483777 65483845 -6670037 - L2 LINE L2 -50 3263 3195 195 42 0 0 chr20 65484095 65484119 -6669763 + (TCCC)n Simple_repeat Simple_repeat 3 26 0 361 279 49 8 chr20 65484458 65484580 -6669302 + MIR SINE MIR 66 192 -70 386 323 88 37 chr20 65484616 65484910 -6668972 - L2 LINE L2 -2 3311 3003 539 181 0 29 chr20 65484977 65485082 -6668800 - MER81 DNA DNA -9 105 4 443 316 121 23 chr20 65485087 65485394 -6668488 - L2 LINE L2 -356 2958 2622 25 0 0 0 chr20 65485648 65485673 -6668209 + AT_rich Low_complexity Low_complexity 1 25 0 685 50 0 0 chr20 65486110 65486190 -6667692 + AluY SINE Alu 2 81 -229 275 313 22 107 chr20 65486199 65486471 -6667411 + L2 LINE L2 3022 3270 -2 1488 169 139 8 chr20 65486545 65486812 -6667070 - AluJb SINE Alu 0 302 1 236 329 47 0 chr20 65486896 65486981 -6666901 - MIR SINE MIR -159 103 15 239 192 219 0 chr20 65487288 65487361 -6666521 + MER96 DNA MER1_type? 4 92 -83 3858 180 22 36 chr20 65487432 65488217 -6665665 + LTR39 LTR ERV1 1 774 -9 816 211 7 0 chr20 65488769 65488916 -6664966 + MLT1B LTR MaLR 231 378 -12 180 327 19 0 chr20 65489428 65489480 -6664402 + L2 LINE L2 3171 3223 -49 2269 125 0 6 chr20 65489482 65489793 -6664089 - AluSx SINE Alu -3 309 1 350 275 51 14 chr20 65489967 65490105 -6663777 + MIR SINE MIR 118 260 -2 830 324 103 22 chr20 65490461 65490955 -6662927 + MLT1K LTR MaLR 38 571 -17 429 20 0 0 chr20 65491755 65491805 -6662077 + (CA)n Simple_repeat Simple_repeat 2 51 0 447 78 0 0 chr20 65491805 65491869 -6662013 + (TC)n Simple_repeat Simple_repeat 1 64 0 240 309 0 0 chr20 65492469 65492537 -6661345 + (CA)n Simple_repeat Simple_repeat 1 68 0 264 184 0 0 chr20 65492648 65492697 -6661185 + L2 LINE L2 3170 3218 -54 1767 166 27 10 chr20 65493323 65493619 -6660263 - AluJo SINE Alu -11 301 1 1428 246 80 61 chr20 65493766 65493954 -6659928 + MLT1E LTR MaLR 22 205 -388 2928 98 19 5 chr20 65493954 65494382 -6659500 - L1PB2 LINE L1 -1 6150 5717 1428 246 80 61 chr20 65494382 65494754 -6659128 + MLT1E LTR MaLR 205 593 0 673 301 118 39 chr20 65495393 65495808 -6658074 + LTR16A LTR ERVL 3 450 0 261 340 0 19 chr20 65495989 65496092 -6657790 + MER5A DNA MER1_type 9 109 -80 1575 135 39 120 chr20 65496113 65496521 -6657361 + THE1C LTR MaLR 1 375 0 2448 80 0 0 chr20 65497431 65497742 -6656140 + AluY SINE Alu 1 311 0 290 286 71 32 chr20 65497751 65497905 -6655977 - MLT1I LTR MaLR -6 403 244 305 234 0 16 chr20 65498048 65498112 -6655770 - MLT1I LTR MaLR -344 65 3 1771 177 197 16 chr20 65498237 65498673 -6655209 + MLT2B2 LTR ERVL 1 515 0 1830 260 149 27 chr20 65499269 65500439 -6653443 + L1MC4 LINE L1 6438 7715 -93 379 273 46 77 chr20 65501834 65502028 -6651854 + MER5A DNA MER1_type 2 189 0 766 145 32 8 chr20 65502043 65502167 -6651715 - AluJo SINE Alu -177 135 9 300 281 79 0 chr20 65503433 65503522 -6650360 - MER91B DNA MER1_type -5 185 90 344 248 103 17 chr20 65503537 65503654 -6650228 - MER91B DNA MER1_type -63 127 1 2269 104 3 0 chr20 65505336 65505634 -6648248 - AluSp SINE Alu -14 299 1 209 33 33 0 chr20 65506236 65506266 -6647616 + (CA)n Simple_repeat Simple_repeat 1 31 0 287 255 39 49 chr20 65506901 65507003 -6646879 - MER5A DNA MER1_type -80 109 9 236 229 16 0 chr20 65507041 65507102 -6646780 + MER5A DNA MER1_type 9 70 -119 1249 14 14 0 chr20 65507106 65507248 -6646634 - L1PA5 LINE L1 -186 5968 5825 1390 36 6 0 chr20 65507248 65507414 -6646468 + L1PA5 LINE L1 5986 6154 0 238 276 255 0 chr20 65507417 65507515 -6646367 + MER5A DNA MER1_type 61 183 -6 1564 162 49 4 chr20 65508146 65508411 -6645471 + AluJb SINE Alu 24 300 -12 243 88 0 0 chr20 65508472 65508506 -6645376 + (A)n Simple_repeat Simple_repeat 1 34 0 373 240 24 15 chr20 65509082 65509208 -6644674 - MIR SINE MIR -55 153 23 2573 56 0 3 chr20 65509240 65509545 -6644337 - AluY SINE Alu -7 304 1 1224 206 98 40 chr20 65510016 65510341 -6643541 + MER2 DNA MER2_type 1 344 0 244 209 23 12 chr20 65511162 65511248 -6642634 + GA-rich Low_complexity Low_complexity 4 90 0 1734 183 3 38 chr20 65513222 65513539 -6640343 + AluJo SINE Alu 1 306 -6 24 53 0 0 chr20 65514739 65514777 -6639105 + AT_rich Low_complexity Low_complexity 1 38 0 296 161 16 0 chr20 65514825 65514887 -6638995 + CT-rich Low_complexity Low_complexity 3 65 0 24 0 0 0 chr20 65518405 65518429 -6635453 + AT_rich Low_complexity Low_complexity 1 24 0 252 0 0 0 chr20 65519600 65519628 -6634254 + (TAAAAA)n Simple_repeat Simple_repeat 2 29 0 557 144 0 11 chr20 65520375 65520465 -6633417 - FLAM_A SINE Alu -34 108 20 252 0 0 0 chr20 65520855 65520883 -6632999 + (A)n Simple_repeat Simple_repeat 1 28 0 5280 31 5 0 chr20 65522675 65523289 -6630593 + L1PA4 LINE L1 5538 6154 -1 1004 97 0 32 chr20 65524017 65524203 -6629679 + (TC)n Simple_repeat Simple_repeat 1 180 0 2458 68 0 3 chr20 65524767 65525062 -6628820 - AluY SINE Alu -17 294 1 22 0 0 0 chr20 65525065 65525087 -6628795 + AT_rich Low_complexity Low_complexity 1 22 0 342 311 84 26 chr20 65525720 65525910 -6627972 + MIR SINE MIR 62 262 0 222 37 0 0 chr20 65526944 65526971 -6626911 + (TTTTG)n Simple_repeat Simple_repeat 3 29 0 188 242 61 15 chr20 65526999 65527065 -6626817 - MIR SINE MIR -70 192 124 33 66 0 0 chr20 65527400 65527461 -6626421 + AT_rich Low_complexity Low_complexity 1 61 0 196 233 33 33 chr20 65527632 65527692 -6626190 + L2 LINE L2 3213 3272 0 182 91 30 0 chr20 65528498 65528531 -6625351 + T-rich Low_complexity Low_complexity 2 35 0 852 316 55 33 chr20 65528686 65529228 -6624654 + LTR67 LTR ERVL 2 555 -2 392 291 146 6 chr20 65529328 65529493 -6624389 - Charlie8 DNA MER1_type -2228 189 2 2147 135 3 0 chr20 65529589 65529886 -6623996 - AluSx SINE Alu -14 298 1 2364 123 43 3 chr20 65529917 65530267 -6623615 - THE1B LTR MaLR 0 364 1 374 252 57 117 chr20 65530505 65530735 -6623147 - LTR67 LTR ERVL -328 229 14 2405 88 0 0 chr20 65530927 65531221 -6622661 + AluSx SINE Alu 1 294 -18 245 272 101 0 chr20 65531327 65531455 -6622427 + MER5A DNA MER1_type 1 145 -33 278 330 53 21 chr20 65531854 65532042 -6621840 + MLT1K LTR MaLR 378 571 -17 231 88 0 0 chr20 65532813 65532847 -6621035 + (CA)n Simple_repeat Simple_repeat 2 35 0 372 330 89 51 chr20 65533337 65534036 -6619846 + L2 LINE L2 2550 3272 0 2094 100 0 0 chr20 65534677 65534938 -6618944 - AluSq SINE Alu -52 261 1 186 319 126 33 chr20 65536472 65536742 -6617140 + L2 LINE L2 2648 2942 -372 730 215 12 12 chr20 65536811 65536983 -6616899 + MER3 DNA MER1_type 5 129 -80 5154 118 14 4 chr20 65536987 65537755 -6616127 + L1PA13 LINE L1 5388 6163 0 2212 109 0 0 chr20 65537755 65538040 -6615842 + AluSx SINE Alu 1 285 -27 1353 52 0 0 chr20 65538165 65538319 -6615563 - AluY SINE Alu -11 300 147 263 258 18 90 chr20 65538324 65538491 -6615391 + L2 LINE L2 3129 3283 -30 204 97 0 0 chr20 65538502 65538533 -6615349 + (TGAA)n Simple_repeat Simple_repeat 1 31 0 181 286 54 0 chr20 65538541 65538597 -6615285 + MIR SINE MIR 82 140 -68 472 253 292 0 chr20 65539439 65539641 -6614241 + MIR SINE MIR 1 261 -1 431 325 41 13 chr20 65539909 65540156 -6613726 - MIR SINE MIR 0 262 11 1130 340 64 19 chr20 65540549 65541409 -6612473 - ERVL LTR ERVL -1112 4652 3754 773 329 32 3 chr20 65541685 65542029 -6611853 - ERVL LTR ERVL -2335 3429 3076 289 341 114 9 chr20 65542029 65542249 -6611633 - LTR16A1 LTR ERVL -214 243 1 2099 121 3 16 chr20 65542645 65542952 -6610930 - AluSx SINE Alu -9 303 1 1202 290 78 25 chr20 65543283 65543796 -6610086 - MLT1H LTR MaLR 0 549 10 450 271 112 21 chr20 65543821 65544009 -6609873 + MIR SINE MIR 58 262 0 23 33 0 0 chr20 65544695 65544725 -6609157 + AT_rich Low_complexity Low_complexity 1 30 0 2504 244 60 28 chr20 65544812 65544846 -6609036 + L1MC4a LINE L1 3368 3399 -2747 1986 146 11 0 chr20 65544846 65545133 -6608749 - AluSx SINE Alu -22 290 1 2504 244 60 28 chr20 65545133 65546134 -6607748 + L1MC4a LINE L1 3399 4436 -1710 524 162 0 10 chr20 65546179 65546278 -6607604 - MLT1A1 LTR MaLR 0 374 277 807 220 45 136 chr20 65546278 65546927 -6606955 - LTR4 LTR ERV1 0 596 7 1090 222 7 36 chr20 65546949 65547224 -6606658 - MLT1A1 LTR MaLR -95 270 4 1384 195 43 0 chr20 65547228 65547551 -6606331 + L1MC4a LINE L1 4530 4866 -1280 266 297 39 45 chr20 65547554 65547709 -6606173 + L1MC4a LINE L1 5430 5583 -538 25 51 0 0 chr20 65547836 65547875 -6606007 + AT_rich Low_complexity Low_complexity 1 39 0 517 259 33 30 chr20 65548058 65548328 -6605554 + L1ME LINE L1 966 1236 -5136 21 36 0 0 chr20 65548453 65548481 -6605401 + AT_rich Low_complexity Low_complexity 1 28 0 1026 126 0 0 chr20 65548496 65548639 -6605243 + AluSg/x SINE Alu 154 296 -16 348 250 10 67 chr20 65548656 65548760 -6605122 + L1ME LINE L1 1123 1220 -5164 342 223 99 9 chr20 65548770 65548981 -6604901 + L1ME LINE L1 1418 1647 -4916 398 312 55 35 chr20 65548984 65549186 -6604696 + L1MC4a LINE L1 5665 5870 -1938 1978 184 127 16 chr20 65549384 65549834 -6604048 - MLT1D LTR MaLR -3 502 3 647 261 133 0 chr20 65551026 65551206 -6602676 + MIR SINE MIR 41 244 -18 269 252 49 93 chr20 65551331 65551557 -6602325 + MARNA DNA Mariner 16 231 -355 387 332 32 11 chr20 65551599 65551786 -6602096 - L2 LINE L2 -5 3308 3118 590 333 73 7 chr20 65551853 65552153 -6601729 - L2 LINE L2 -545 2769 2450 1916 154 6 35 chr20 65552598 65552917 -6600965 + AluSx SINE Alu 1 310 -2 180 326 0 0 chr20 65553779 65553822 -6600060 + L2 LINE L2 3137 3179 -93 348 346 74 0 chr20 65553950 65554112 -6599770 - MIR SINE MIR -9 253 80 499 315 153 0 chr20 65554171 65554374 -6599508 + L2 LINE L2 2856 3089 -224 280 331 124 0 chr20 65555016 65555161 -6598721 - MIR SINE MIR -90 172 10 338 323 44 75 chr20 65555327 65555553 -6598329 - MIR SINE MIR -16 246 28 578 302 59 12 chr20 65556252 65556421 -6597461 - MER5A DNA MER1_type -3 186 10 588 301 31 16 chr20 65556447 65556640 -6597242 + MIR SINE MIR 25 220 -42 29 28 0 0 chr20 65556678 65556714 -6597168 + AT_rich Low_complexity Low_complexity 1 36 0 1052 179 82 88 chr20 65556862 65557202 -6596680 - MER44D DNA MER2_type -1 608 1 441 358 17 6 chr20 65557232 65557405 -6596477 - MIR SINE MIR -70 192 18 1259 274 89 25 chr20 65557897 65558371 -6595511 - MLT1K LTR MaLR 0 588 85 442 288 116 43 chr20 65559464 65559836 -6594046 - MLT1K LTR MaLR -24 564 166 3162 156 9 14 chr20 65559960 65560525 -6593357 + L1PB3 LINE L1 5593 6154 0 1497 202 11 32 chr20 65560771 65561048 -6592834 + AluJo SINE Alu 12 282 -30 414 222 33 85 chr20 65561727 65561765 -6592117 + MER117 DNA MER1_type 27 65 -132 956 196 72 5 chr20 65561765 65561974 -6591908 - MER58A DNA MER1_type -1 223 1 414 222 33 85 chr20 65561974 65562088 -6591794 + MER117 DNA MER1_type 65 171 -26 3566 90 2 38 chr20 65562093 65562376 -6591506 - MER75 DNA T2_type 0 514 257 2195 115 0 10 chr20 65562376 65562688 -6591194 + AluSc SINE Alu 1 309 0 3566 90 2 38 chr20 65562688 65562937 -6590945 - MER75 DNA T2_type -257 257 1 29792 106 18 64 chr20 65563463 65569914 -6583968 + L1PA7 LINE L1 12 6151 -3 906 207 12 0 chr20 65570185 65570354 -6583528 + MER45A DNA AcHobo 1 171 -7 289 120 0 0 chr20 65570458 65570508 -6583374 - Alu SINE Alu -3 297 248 547 300 52 14 chr20 65570730 65570940 -6582942 + MIR SINE MIR 17 234 -28 399 321 5 0 chr20 65571122 65571309 -6582573 + L1ME4a LINE L1 5710 5897 -224 348 295 126 0 chr20 65571319 65571414 -6582468 + L2 LINE L2 3161 3267 -5 194 189 0 19 chr20 65571559 65571612 -6582270 + GA-rich Low_complexity Low_complexity 2 53 0 219 310 96 96 chr20 65571658 65571686 -6582196 + MIR SINE MIR 7 34 -228 2449 63 0 0 chr20 65571686 65571972 -6581910 + AluY SINE Alu 16 301 -10 219 310 96 96 chr20 65571972 65572182 -6581700 + MIR SINE MIR 33 245 -17 434 288 63 24 chr20 65573032 65573237 -6580645 + MLT1J LTR MaLR 225 437 -74 1738 229 25 19 chr20 65573243 65573718 -6580164 - LTR40a LTR ERVL -2 517 40 786 239 69 0 chr20 65573919 65574107 -6579775 + MIR SINE MIR 30 230 -32 244 356 67 12 chr20 65574125 65574258 -6579624 + MIR SINE MIR 4 139 -69 330 247 25 25 chr20 65575452 65575533 -6578349 + L2 LINE L2 2978 3058 -214 810 260 101 24 chr20 65575734 65576423 -6577459 + L1ME1 LINE L1 3225 3980 -2166 4592 72 1 1 chr20 65576429 65577085 -6576797 - L1PA7 LINE L1 -1298 4848 4193 6430 66 14 1 chr20 65577085 65578405 -6575477 + L1PA7 LINE L1 4860 6194 0 1436 190 70 20 chr20 65578419 65578761 -6575121 - MLT1A1 LTR MaLR -2 363 5 3379 254 44 43 chr20 65578763 65580419 -6573463 + L1ME1 LINE L1 3975 5594 -572 3208 38 3 0 chr20 65580419 65580811 -6573071 - L1PA4 LINE L1 0 6155 5763 3379 254 44 43 chr20 65580811 65581235 -6572647 + L1ME1 LINE L1 5594 6016 -150 233 169 102 17 chr20 65581298 65581357 -6572525 - L1ME4a LINE L1 -94 6027 5964 322 265 134 34 chr20 65581370 65581661 -6572221 + L1ME4a LINE L1 5637 5956 -165 249 239 86 86 chr20 65582082 65582199 -6571683 + MIR SINE MIR 90 206 -56 218 320 56 16 chr20 65582507 65582632 -6571250 + MIR SINE MIR 74 203 -59 219 284 11 11 chr20 65583254 65583344 -6570538 - MIR SINE MIR -63 145 81 1727 158 14 4 chr20 65583467 65583745 -6570137 - AluJo SINE Alu -30 282 2 21 0 0 0 chr20 65583755 65583776 -6570106 + AT_rich Low_complexity Low_complexity 1 21 0 27 0 0 0 chr20 65584993 65585020 -6568862 + AT_rich Low_complexity Low_complexity 1 27 0 198 0 0 0 chr20 65585188 65585210 -6568672 + (TC)n Simple_repeat Simple_repeat 2 23 0 1095 172 34 5 chr20 65585453 65585662 -6568220 + MER20 DNA MER1_type 1 215 -4 357 336 0 9 chr20 65586194 65586304 -6567578 - MIR SINE MIR -134 128 20 305 338 50 50 chr20 65587214 65587374 -6566508 + L2 LINE L2 3097 3256 -16 786 243 111 4 chr20 65588004 65588230 -6565652 + LTR40a LTR ERVL 1 250 -269 914 210 55 85 chr20 65588230 65588502 -6565380 + AluJo SINE Alu 1 264 -48 884 234 35 17 chr20 65588530 65588761 -6565121 + LTR40b LTR ERVL 173 407 -55 273 287 61 43 chr20 65589016 65589131 -6564751 + L2 LINE L2 3154 3270 -2 947 271 103 23 chr20 65589175 65589399 -6564483 + L2 LINE L2 2680 2885 -428 2653 123 36 5 chr20 65589399 65589814 -6564068 + MSTA LTR MaLR 1 428 0 947 271 103 23 chr20 65589814 65590103 -6563779 + L2 LINE L2 2885 3313 0 335 306 19 19 chr20 65590104 65590212 -6563670 + GA-rich Low_complexity Low_complexity 5 112 0 21 36 0 0 chr20 65590765 65590793 -6563089 + AT_rich Low_complexity Low_complexity 1 28 0 441 229 223 12 chr20 65592115 65592281 -6561601 + MIR SINE MIR 31 231 -31 1010 243 18 4 chr20 65592704 65592930 -6560952 + MIR SINE MIR 13 241 -21 1204 54 0 0 chr20 65593117 65593266 -6560616 + AluY SINE Alu 163 311 0 3321 216 27 16 chr20 65593360 65594730 -6559152 - L1ME1 LINE L1 -160 6075 4684 5311 124 21 13 chr20 65594730 65595861 -6558021 + L1PA16 LINE L1 5024 6161 -5 3321 216 27 16 chr20 65595861 65595943 -6557939 - L1ME1 LINE L1 -1551 4684 4604 6232 10 0 0 chr20 65595943 65596644 -6557238 - L1PA2 LINE L1 -5 6150 5450 2541 20 0 0 chr20 65596644 65597036 -6556846 + L1PA2 LINE L1 5073 5464 -691 5222 245 66 34 chr20 65597039 65599214 -6554668 - L1ME1 LINE L1 -1606 4609 2365 446 255 0 0 chr20 65599214 65599308 -6554574 + MER82 DNA MER2_type 1 94 -559 294 341 85 8 chr20 65599386 65599515 -6554367 - MIR SINE MIR -123 139 1 797 287 10 5 chr20 65599549 65599751 -6554131 + MER82 DNA MER2_type 447 649 -4 6462 243 79 18 chr20 65599753 65601986 -6551896 - L1ME1 LINE L1 -3992 2404 36 263 274 266 0 chr20 65602181 65602294 -6551588 + MIR SINE MIR 120 262 0 374 356 53 0 chr20 65602648 65602780 -6551102 + MER91B DNA MER1_type 5 143 -47 549 275 72 31 chr20 65602968 65603190 -6550692 + MIR SINE MIR 6 236 -26 273 169 34 17 chr20 65603326 65603385 -6550497 + Charlie5 DNA MER1_type 5 64 -2548 472 289 141 20 chr20 65603525 65603829 -6550053 + L2 LINE L2 2964 3304 -9 252 0 0 0 chr20 65604408 65604436 -6549446 + (CA)n Simple_repeat Simple_repeat 2 29 0 22 0 0 0 chr20 65604626 65604648 -6549234 + AT_rich Low_complexity Low_complexity 1 22 0 32 26 0 0 chr20 65604769 65604808 -6549074 + AT_rich Low_complexity Low_complexity 1 39 0 576 329 43 75 chr20 65606088 65606450 -6547432 - L2 LINE L2 -1 3271 2922 603 282 66 33 chr20 65606450 65606663 -6547219 + MIR SINE MIR 3 222 -40 438 248 8 8 chr20 65606663 65606792 -6547090 - L1ME LINE L1 -297 5824 5696 214 96 19 19 chr20 65607080 65607100 -6546782 + (CA)n Simple_repeat Simple_repeat 2 21 -32 2408 115 25 3 chr20 65607100 65607456 -6546426 - THE1B LTR MaLR 0 364 1 10984 100 19 18 chr20 65607457 65609034 -6544848 - THE1B-int LTR MaLR -1 1579 1 2305 132 25 3 chr20 65609034 65609390 -6544492 - THE1B LTR MaLR 0 364 1 214 96 19 19 chr20 65609390 65609418 -6544464 + (CA)n Simple_repeat Simple_repeat 19 53 0 1644 233 49 14 chr20 65609448 65609934 -6543948 - L1ME1 LINE L1 -21 6145 5643 1518 191 14 25 chr20 65610293 65610575 -6543307 + AluJo SINE Alu 1 279 -33 270 0 0 0 chr20 65610582 65610612 -6543270 + (TTAA)n Simple_repeat Simple_repeat 3 32 0 702 199 31 84 chr20 65610805 65610961 -6542921 + ORSL DNA AcHobo 4 141 -134 1963 159 0 0 chr20 65610961 65611269 -6542613 + AluSx SINE Alu 1 308 0 702 199 31 84 chr20 65611269 65611398 -6542484 + ORSL DNA AcHobo 141 275 0 511 326 11 6 chr20 65611532 65611710 -6542172 - MIR SINE MIR -25 237 59 318 286 95 34 chr20 65611940 65612087 -6541795 + L1ME LINE L1 5267 5422 -699 2239 102 0 23 chr20 65613267 65613570 -6540312 + AluSx SINE Alu 1 296 -16 1111 295 99 21 chr20 65613685 65614382 -6539500 - L2 LINE L2 -19 3294 2545 329 224 31 41 chr20 65614429 65614527 -6539355 - L2 LINE L2 -3150 164 68 272 296 9 0 chr20 65614694 65614802 -6539080 + L1ME LINE L1 5550 5658 -463 267 291 284 8 chr20 65614891 65615018 -6538864 - MIR SINE MIR -12 250 89 781 261 103 0 chr20 65615062 65615265 -6538617 - MER58A DNA MER1_type 0 224 1 552 212 59 41 chr20 65615411 65615581 -6538301 - MLT1J2 LTR MaLR -12 438 266 1017 177 166 11 chr20 65615614 65615879 -6538003 - LOR1a LTR ERV1 0 497 192 284 171 14 0 chr20 65615876 65615946 -6537936 - LOR1a LTR ERV1 -189 308 238 * 425 264 7 20 chr20 65616036 65616175 -6537707 - MLT1J2 LTR MaLR -227 182 48 212 392 49 0 chr20 65616730 65616832 -6537050 + L2 LINE L2 3149 3255 -17 561 252 191 32 chr20 65617062 65617371 -6536511 + MLT1K LTR MaLR 140 497 -91 484 226 62 113 chr20 65617674 65618009 -6535873 + MLT1I LTR MaLR 66 387 -22 257 47 0 0 chr20 65618043 65618086 -6535796 - AluY SINE Alu -1 299 257 1992 134 0 3 chr20 65618605 65618895 -6534987 - AluSx SINE Alu -22 290 2 209 167 95 0 chr20 65619614 65619656 -6534226 + L2 LINE L2 3268 3313 0 9046 40 3 0 chr20 65620721 65621887 -6531995 - L1PA3 LINE L1 -1718 4428 3260 8083 30 0 0 chr20 65621887 65623618 -6530264 + L1PA3 LINE L1 4421 6151 -4 252 149 0 0 chr20 65623629 65623676 -6530206 + (A)n Simple_repeat Simple_repeat 1 47 0 1859 160 38 35 chr20 65623681 65624081 -6529801 + MER95 LTR ERV 18 418 -13 326 183 99 14 chr20 65624686 65624757 -6529125 + MIR SINE MIR 79 155 -107 252 77 0 0 chr20 65625189 65625228 -6528654 + (T)n Simple_repeat Simple_repeat 1 39 0 769 263 137 4 chr20 65626510 65626914 -6526968 + L1MCa LINE L1 21 311 -5596 417 103 15 0 chr20 65626953 65627021 -6526861 + L1MA9 LINE L1 6242 6310 -2 317 202 58 19 chr20 65627081 65627185 -6526697 + L1MCa LINE L1 318 425 -5482 2347 213 102 40 chr20 65627265 65628563 -6525319 + L1MCa LINE L1 425 2061 -4546 2809 123 12 2 chr20 65628563 65628987 -6524895 - MSTA LTR MaLR 0 428 1 2347 213 102 40 chr20 65628987 65629202 -6524680 + L1MCa LINE L1 2061 2261 -4346 1688 137 12 4 chr20 65629213 65629468 -6524414 - AluSg1 SINE Alu -1 308 52 222 254 175 26 chr20 65629489 65629603 -6524279 + L2 LINE L2 3180 3310 -3 334 330 88 61 chr20 65629938 65630108 -6523774 - L2 LINE L2 0 3272 3108 1029 140 17 22 chr20 65630108 65630286 -6523596 + L1PA10 LINE L1 5991 6167 -1 334 330 88 61 chr20 65630286 65630609 -6523273 - L2 LINE L2 -164 3108 2777 4854 164 38 12 chr20 65630657 65630676 -6523206 + L1MC3 LINE L1 6768 6785 -1000 450 110 12 37 chr20 65630676 65630758 -6523124 - MADE1 DNA Mariner 0 80 1 4854 164 38 12 chr20 65630758 65630829 -6523053 + L1MC3 LINE L1 6785 6853 -932 192 40 0 0 chr20 65630829 65630854 -6523028 + (CA)n Simple_repeat Simple_repeat 2 26 0 4854 164 38 12 chr20 65630854 65631741 -6522141 + L1MC3 LINE L1 6853 7771 -14 2032 78 27 0 chr20 65631749 65632005 -6521877 + AluSq SINE Alu 37 299 -14 304 261 61 9 chr20 65632062 65632177 -6521705 - L2 LINE L2 -641 2673 2553 2570 183 32 124 chr20 65632490 65632507 -6521375 + L1MC4a LINE L1 6826 6843 -965 1463 212 35 82 chr20 65632507 65632997 -6520885 - MLT1C LTR MaLR 0 467 1 2570 183 32 124 chr20 65632997 65633517 -6520365 + L1MC4a LINE L1 6843 7409 -399 2003 145 0 3 chr20 65633517 65633813 -6520069 + AluJb SINE Alu 1 295 -17 2570 183 32 124 chr20 65633813 65634245 -6519637 + L1MC4a LINE L1 7409 7606 -202 2391 98 13 0 chr20 65634245 65634551 -6519331 + AluSq SINE Alu 1 310 -3 2570 183 32 124 chr20 65634551 65634737 -6519145 + L1MC4a LINE L1 7606 7808 0 458 330 70 30 chr20 65634773 65635103 -6518779 - L2 LINE L2 -779 2535 2193 260 321 9 19 chr20 65635161 65635267 -6518615 - L2 LINE L2 -1317 1997 1893 194 148 19 130 chr20 65635439 65635466 -6518416 - MIR SINE MIR -112 150 130 1103 260 189 20 chr20 65635466 65635973 -6517909 + MLT1E LTR MaLR 1 593 0 194 148 19 130 chr20 65635973 65635999 -6517883 - MIR SINE MIR -132 130 103 783 243 82 117 chr20 65636004 65636544 -6517338 + LTR33 LTR ERVL 1 521 0 399 228 126 78 chr20 65636678 65636803 -6517079 + MIR SINE MIR 34 174 -88 1888 173 3 0 chr20 65636803 65637092 -6516790 + AluSx SINE Alu 1 290 -22 399 228 126 78 chr20 65637092 65637172 -6516710 + MIR SINE MIR 174 249 -13 1039 235 104 10 chr20 65637968 65638372 -6515510 + MER113 DNA MER1_type? 7 448 -73 546 335 98 24 chr20 65638792 65639129 -6514753 - L2 LINE L2 -20 3293 2932 287 269 26 39 chr20 65639145 65639223 -6514659 - MIR SINE MIR -160 102 26 1235 296 116 7 chr20 65639224 65639802 -6514080 - L2 LINE L2 -391 2923 2283 617 251 56 34 chr20 65640106 65640285 -6513597 - MIR SINE MIR -79 183 1 2151 143 14 27 chr20 65640353 65640723 -6513159 + MLT1A1 LTR MaLR 1 365 0 528 297 59 38 chr20 65640918 65641132 -6512750 + MIR SINE MIR 20 242 -20 243 250 66 13 chr20 65641629 65641705 -6512177 - L2 LINE L2 -1 3271 3192 334 192 14 14 chr20 65641800 65641873 -6512009 + MER97a DNA MER1_type? 15 87 -807 180 259 78 60 chr20 65642036 65642152 -6511730 - L2 LINE L2 -225 3047 2930 299 235 15 53 chr20 65642182 65642382 -6511500 - MER102a DNA MER1_type -25 305 70 565 341 12 4 chr20 65642829 65643075 -6510807 - MIR SINE MIR -12 250 3 482 278 54 34 chr20 65643970 65644175 -6509707 - MIR SINE MIR -8 254 46 318 50 0 0 chr20 65644248 65644288 -6509594 + (CAT)n Simple_repeat Simple_repeat 2 41 0 5486 129 30 8 chr20 65644451 65645766 -6508116 + L1PA16 LINE L1 4822 6166 0 262 211 77 0 chr20 65646500 65646552 -6507330 + AluJo SINE Alu 8 63 -239 2328 121 30 30 chr20 65646552 65646916 -6506966 + THE1B LTR MaLR 1 364 0 1498 145 0 40 chr20 65646916 65647164 -6506718 + AluJo SINE Alu 59 296 -16 520 308 114 9 chr20 65649529 65649740 -6504142 + MIR SINE MIR 17 249 -13 22 0 0 0 chr20 65650690 65650712 -6503170 + AT_rich Low_complexity Low_complexity 1 22 0 2185 78 3 3 chr20 65650729 65651011 -6502871 - L1PA7 LINE L1 -5 6149 5868 3312 214 81 11 chr20 65651400 65652578 -6501304 - L1ME1 LINE L1 -5 6161 4899 217 198 35 58 chr20 65653536 65653622 -6500260 + L3 LINE CR1 1180 1263 -314 497 276 116 18 chr20 65654105 65654330 -6499552 - MIR SINE MIR -15 247 1 566 260 26 2 chr20 65654927 65655117 -6498765 - MIR SINE MIR -10 252 20 1310 215 5 0 chr20 65655130 65655353 -6498529 + MER58A DNA MER1_type 1 224 0 1776 179 61 165 chr20 65655511 65656315 -6497567 - LTR8A LTR ERV1 -7 720 1 407 307 100 0 chr20 65657397 65657547 -6496335 - MIR SINE MIR -48 214 50 501 306 69 8 chr20 65658182 65658427 -6495455 - MIR SINE MIR 0 262 3 587 236 64 0 chr20 65658430 65658587 -6495295 - MER58A DNA MER1_type -4 220 54 819 232 76 0 chr20 65658587 65658811 -6495071 - L1MA4 LINE L1 -12 6288 6048 379 260 0 0 chr20 65658813 65658886 -6494996 - MER58A DNA MER1_type -34 73 1 333 274 34 34 chr20 65659094 65659211 -6494671 - MLT1K LTR MaLR -34 554 438 2498 76 7 0 chr20 65659271 65659575 -6494307 - AluSq SINE Alu -7 306 1 748 262 6 22 chr20 65659681 65659864 -6494018 + MLT1K LTR MaLR 352 531 -57 1478 140 42 132 chr20 65660098 65660132 -6493750 - L1MC1 LINE L1 -4 6329 6294 1739 150 185 19 chr20 65660132 65660499 -6493383 + MSTA LTR MaLR 1 428 0 1478 140 42 132 chr20 65660499 65660843 -6493039 - L1MC1 LINE L1 -39 6294 5985 335 234 58 80 chr20 65661980 65662117 -6491765 - L2 LINE L2 -1 3312 3179 225 0 0 0 chr20 65662512 65662537 -6491345 + (CA)n Simple_repeat Simple_repeat 2 26 0 391 278 44 61 chr20 65663129 65663309 -6490573 + MIR SINE MIR 31 207 -55 460 259 189 0 chr20 65663370 65663555 -6490327 - MIR SINE MIR -35 227 8 395 223 17 6 chr20 65664178 65664353 -6489529 + GA-rich Low_complexity Low_complexity 2 178 0 317 203 0 0 chr20 65664553 65664617 -6489265 + Charlie8 DNA MER1_type 109 172 -2245 1174 148 5 26 chr20 65664617 65664806 -6489076 + AluJo SINE Alu 3 187 -125 742 259 79 53 chr20 65664828 65665168 -6488714 + Charlie8 DNA MER1_type 143 491 -1926 300 226 110 96 chr20 65665755 65665901 -6487981 - LTR67 LTR ERVL 0 557 410 1072 185 23 9 chr20 65666084 65666300 -6487582 - MER20 DNA MER1_type 0 219 1 1791 165 39 28 chr20 65666925 65667288 -6486594 - THE1C LTR MaLR 0 375 9 212 175 0 0 chr20 65667399 65667439 -6486443 + (TAAA)n Simple_repeat Simple_repeat 2 41 0 888 248 52 9 chr20 65668702 65668912 -6484970 - MER58A DNA MER1_type 0 224 6 2054 170 28 57 chr20 65669031 65669455 -6484427 - MER54A LTR ERVL 0 901 490 509 202 0 6 chr20 65669464 65669632 -6484250 + CT-rich Low_complexity Low_complexity 2 168 0 714 167 0 0 chr20 65669680 65669860 -6484022 + CT-rich Low_complexity Low_complexity 1 180 0 1155 173 95 39 chr20 65669865 65670149 -6483733 - MER73 LTR ERVL -344 300 1 2045 125 0 3 chr20 65670632 65670920 -6482962 + AluSx SINE Alu 13 299 -13 982 233 43 5 chr20 65672425 65672635 -6481247 + MER58A DNA MER1_type 7 224 0 383 270 8 22 chr20 65673107 65673250 -6480632 - MIR SINE MIR -63 145 49 24 0 0 0 chr20 65673395 65673419 -6480463 + AT_rich Low_complexity Low_complexity 1 24 0 254 257 73 46 chr20 65674056 65674165 -6479717 + LTR67 LTR ERVL 429 540 -17 519 268 107 51 chr20 65674834 65675301 -6478581 + L2 LINE L2 2739 3222 -91 279 310 0 0 chr20 65675340 65675411 -6478471 + GA-rich Low_complexity Low_complexity 1 71 0 446 253 37 56 chr20 65675532 65675583 -6478299 - MER69 DNA AcHobo 0 2526 2476 2245 93 0 40 chr20 65675583 65675907 -6477975 + AluSp SINE Alu 2 312 -1 446 253 37 56 chr20 65675907 65676017 -6477865 - MER69 DNA AcHobo -50 2476 2368 367 259 70 93 chr20 65676754 65677024 -6476858 + L1MC4a LINE L1 5425 5688 -2120 490 309 57 25 chr20 65677075 65677392 -6476490 + L1MC4a LINE L1 5695 6021 -1787 309 336 79 35 chr20 65677747 65677976 -6475906 + MLT1K LTR MaLR 7 245 -343 666 83 0 0 chr20 65678051 65678147 -6475735 + AluY SINE Alu 214 309 -2 693 242 111 45 chr20 65678152 65678396 -6475486 + MLT1K LTR MaLR 327 586 -2 427 311 46 13 chr20 65678848 65678999 -6474883 + MIR SINE MIR 28 183 -79 972 243 71 58 chr20 65679045 65679574 -6474308 + MER39 LTR ERV1 5 707 0 24 53 0 0 chr20 65679747 65679785 -6474097 + AT_rich Low_complexity Low_complexity 1 38 0 244 337 34 0 chr20 65679795 65679884 -6473998 - L2 LINE L2 -54 3259 3168 294 281 68 68 chr20 65679972 65680327 -6473555 - LTR16A1 LTR ERVL -52 405 73 3091 112 25 7 chr20 65680394 65680833 -6473049 + MER1A DNA MER1_type 57 503 -26 197 227 0 0 chr20 65680918 65680962 -6472920 - L2 LINE L2 -253 3060 3017 1179 161 9 14 chr20 65681500 65681717 -6472165 + MER20 DNA MER1_type 1 216 -3 234 191 0 0 chr20 65681965 65682012 -6471870 + CT-rich Low_complexity Low_complexity 3 49 0 596 293 117 20 chr20 65682087 65682336 -6471546 - MLT1K LTR MaLR -259 329 57 390 292 222 9 chr20 65682425 65682641 -6471241 + MIR SINE MIR 1 262 0 252 306 52 37 chr20 65682723 65682857 -6471025 - MIR SINE MIR -57 151 16 567 219 40 126 chr20 65683594 65683701 -6470181 - MIR SINE MIR -2 260 145 2339 89 3 0 chr20 65683701 65683992 -6469890 - AluSg SINE Alu -17 293 2 567 219 40 126 chr20 65683992 65684019 -6469863 - MIR SINE MIR -117 145 117 2678 103 11 0 chr20 65684019 65684379 -6469503 + THE1B LTR MaLR 1 364 0 567 219 40 126 chr20 65684379 65684521 -6469361 - MIR SINE MIR -145 117 7 305 301 21 28 chr20 65684845 65684988 -6468894 + MIR SINE MIR 47 188 -74 518 333 16 12 chr20 65685454 65685709 -6468173 - MIR SINE MIR 0 262 7 2531 58 3 3 chr20 65686007 65686318 -6467564 + AluY SINE Alu 1 311 0 3009 96 5 42 chr20 65686405 65686853 -6467029 + MER57B LTR ERV1 1 431 -3 785 290 18 33 chr20 65686918 65687190 -6466692 - MLT1K LTR MaLR -194 394 127 636 296 9 24 chr20 65688226 65688439 -6465443 + MIR SINE MIR 40 249 -13 298 307 51 15 chr20 65688723 65688860 -6465022 - MLT1I LTR MaLR -267 142 1 1587 169 62 62 chr20 65688937 65689066 -6464816 + MLT1B LTR MaLR 1 129 -261 2055 128 51 34 chr20 65689066 65689419 -6464463 + THE1B LTR MaLR 5 363 -1 1587 169 62 62 chr20 65689419 65689679 -6464203 + MLT1B LTR MaLR 128 390 0 376 286 39 39 chr20 65689869 65690051 -6463831 - MIR SINE MIR -1 261 80 271 225 63 81 chr20 65690293 65690508 -6463374 - MIR SINE MIR -2 260 10 2167 126 3 0 chr20 65691638 65691939 -6461943 + AluSx SINE Alu 1 302 -10 1914 69 58 31 chr20 65693452 65693712 -6460170 - AluY SINE Alu -9 302 36 1323 265 137 32 chr20 65694067 65694719 -6459163 + L1ME3A LINE L1 5446 6165 -5 2127 130 3 0 chr20 65695027 65695319 -6458563 - AluJb SINE Alu -19 293 1 331 246 74 34 chr20 65695791 65695966 -6457916 + L1MC4 LINE L1 5307 5488 -2320 405 296 34 28 chr20 65696228 65696407 -6457475 + L1MC4 LINE L1 6891 7070 -972 725 269 80 42 chr20 65696472 65697064 -6456818 + L1MC5 LINE L1 7004 7495 -520 317 330 8 0 chr20 65697695 65697813 -6456069 + L1MC4 LINE L1 7281 7399 -643 233 321 161 16 chr20 65698001 65698194 -6455688 + MIR SINE MIR 3 223 -39 2722 140 12 5 chr20 65698895 65699317 -6454565 + MSTA LTR MaLR 4 428 0 2271 102 0 3 chr20 65699854 65700147 -6453735 + AluSx SINE Alu 7 298 -14 240 167 0 0 chr20 65700185 65700227 -6453655 - Charlie8 DNA MER1_type -1000 1417 1376 * 1040 229 83 89 chr20 65700223 65700767 -6453115 - Charlie8 DNA MER1_type -2141 276 2 677 240 10 60 chr20 65700785 65700985 -6452897 - MER91B DNA MER1_type 0 190 1 1803 91 102 0 chr20 65702482 65702746 -6451136 + L1PB2 LINE L1 5495 5785 -366 2538 51 0 10 chr20 65702746 65703057 -6450825 + AluYa5 SINE Alu 1 308 -3 1227 129 0 0 chr20 65703060 65703223 -6450659 + AluSp SINE Alu 137 299 -14 2635 109 11 0 chr20 65703226 65703602 -6450280 + L1PB2 LINE L1 5769 6148 -3 363 256 184 0 chr20 65703669 65703794 -6450088 + MIR SINE MIR 45 192 -70 261 163 0 0 chr20 65704092 65704141 -6449741 - MIR SINE MIR -133 129 81 1339 102 0 0 chr20 65704190 65704356 -6449526 - AluSx SINE Alu -144 168 3 945 107 7 7 chr20 65704357 65704497 -6449385 + AluSg/x SINE Alu 168 307 -5 795 194 117 7 chr20 65706889 65707211 -6446671 - MLT1D LTR MaLR -1 504 117 2169 121 3 0 chr20 65707721 65708018 -6445864 - AluSx SINE Alu -14 298 1 200 35 35 0 chr20 65708472 65708501 -6445381 + (TAAA)n Simple_repeat Simple_repeat 4 33 0 1123 261 144 3 chr20 65708532 65708885 -6444997 + Zaphod DNA AcHobo 118 520 -3511 349 125 0 83 chr20 65708886 65708958 -6444924 - MLT2D LTR ERVL 0 414 357 291 184 61 10 chr20 65708960 65709058 -6444824 + (TAGA)n Simple_repeat Simple_repeat 2 104 0 2335 192 48 9 chr20 65709065 65709519 -6444363 - MLT2B1 LTR ERVL -48 472 1 576 227 55 83 chr20 65709519 65709866 -6444016 + Zaphod DNA AcHobo 517 853 -3178 270 169 135 45 chr20 65709952 65710041 -6443841 + MER5C DNA MER1_type 5 101 -223 615 218 18 24 chr20 65710137 65710307 -6443575 + Zaphod DNA AcHobo 3595 3763 -268 316 246 186 0 chr20 65712042 65712160 -6441722 + MIR SINE MIR 12 151 -111 472 148 0 12 chr20 65712438 65712519 -6441363 + MADE1 DNA Mariner 1 80 0 604 205 106 7 chr20 65712724 65712875 -6441007 + L2 LINE L2 2392 2557 -757 2687 242 13 27 chr20 65712875 65713498 -6440384 + MLT1E2 LTR MaLR 1 614 -12 1365 259 72 46 chr20 65713505 65714127 -6439755 + L2 LINE L2 2563 3221 -92 865 146 0 8 chr20 65714127 65714257 -6439625 - FLAM_C SINE Alu -1 132 4 1365 259 72 46 chr20 65714257 65714311 -6439571 + L2 LINE L2 3221 3272 -41 1097 237 105 24 chr20 65714943 65715361 -6438521 + MLT1C LTR MaLR 10 467 0 2971 134 45 14 chr20 65715551 65716042 -6437840 + MER84 LTR ERV1 1 506 -1 511 262 152 0 chr20 65716120 65716284 -6437598 + MER58A DNA MER1_type 36 224 0 348 352 52 17 chr20 65716284 65716514 -6437368 - L2 LINE L2 -495 2819 2582 757 254 88 58 chr20 65716852 65717060 -6436822 + L1ME4a LINE L1 5311 5511 -610 1887 164 0 7 chr20 65717060 65717359 -6436523 + AluJo SINE Alu 8 304 -8 757 254 88 58 chr20 65717359 65717580 -6436302 + L1ME4a LINE L1 5511 5753 -368 257 270 0 99 chr20 65717614 65717725 -6436157 - L2 LINE L2 -1 3312 3213 261 237 180 7 chr20 65717728 65717867 -6436015 + L1ME4a LINE L1 5788 5950 -171 532 174 0 11 chr20 65718967 65719059 -6434823 - 5S rRNA rRNA -30 91 1 1985 168 189 21 chr20 65719211 65719557 -6434325 + MER39 LTR ERV1 161 606 -101 3486 78 0 5 chr20 65719557 65720003 -6433879 - MLT2A1 LTR ERVL 0 444 1 1985 168 189 21 chr20 65720003 65720121 -6433761 + MER39 LTR ERV1 606 703 -4 823 206 231 11 chr20 65720875 65721152 -6432730 - LTR37A LTR ERV1 0 426 89 234 0 0 0 chr20 65721164 65721190 -6432692 + (A)n Simple_repeat Simple_repeat 1 26 0 3926 135 17 22 chr20 65721859 65722497 -6431385 + MER41B LTR ERV1 1 635 0 619 178 54 0 chr20 65722589 65722718 -6431164 + MER20 DNA MER1_type 2 137 -82 4155 159 45 69 chr20 65723370 65724282 -6429600 - MER4D LTR ERV1 -8 895 6 1332 163 0 69 chr20 65724281 65724558 -6429324 + MLT1B LTR MaLR 11 268 -122 * 637 115 135 0 chr20 65724558 65724662 -6429220 + MER84 LTR ERVI 1 118 -389 2450 97 31 60 chr20 65724667 65725050 -6428832 - MER51B LTR ERV1 -5 372 1 2553 121 10 23 chr20 65725050 65725448 -6428434 + MER84 LTR ERVI 115 507 0 852 164 0 0 chr20 65725448 65725575 -6428307 + MLT1B LTR MaLR 264 390 0 28 29 0 0 chr20 65725630 65725665 -6428217 + AT_rich Low_complexity Low_complexity 1 35 0 4206 186 19 51 chr20 65725666 65726667 -6427215 - LTR5 LTR ERVK 0 969 1 2427 97 0 6 chr20 65726681 65726992 -6426890 - AluSc SINE Alu 0 309 1 449 346 18 9 chr20 65727062 65727290 -6426592 - MIR SINE MIR 0 262 33 797 251 17 84 chr20 65728108 65728197 -6425685 - MLT1J LTR MaLR -16 495 402 1895 136 9 46 chr20 65728197 65728520 -6425362 + AluJo SINE Alu 1 311 -1 797 251 17 84 chr20 65728520 65728729 -6425153 - MLT1J LTR MaLR -109 402 217 220 250 0 0 chr20 65729184 65729232 -6424650 + L2 LINE L2 3254 3301 -12 5829 67 16 13 chr20 65729490 65730254 -6423628 + MER4E LTR ERV1 1 766 0 1853 121 66 3 chr20 65730289 65730578 -6423304 + AluSc SINE Alu 1 307 -2 993 269 57 71 chr20 65730597 65730976 -6422906 - MLT1J LTR MaLR -78 433 59 4275 139 2 2 chr20 65730976 65731611 -6422271 + MER41B LTR ERV1 1 635 0 993 269 57 71 chr20 65731611 65731670 -6422212 - MLT1J LTR MaLR -452 59 1 1006 159 97 0 chr20 65732361 65732556 -6421326 - MER20 DNA MER1_type 0 219 6 3610 122 10 47 chr20 65732570 65732857 -6421025 - MER4A LTR ERV1 0 600 304 2162 142 0 0 chr20 65732857 65733160 -6420722 - AluSx SINE Alu -9 303 1 3610 122 10 47 chr20 65733160 65733495 -6420387 - MER4A LTR ERV1 -296 304 1 2143 192 32 36 chr20 65733641 65734118 -6419764 - LTR10B LTR ERV1 0 505 1 186 214 0 0 chr20 65734118 65734160 -6419722 - L2 LINE L2 -74 3239 3198 426 382 9 9 chr20 65734163 65734383 -6419499 - MIR SINE MIR -22 240 21 3350 143 6 2 chr20 65734383 65734909 -6418973 + MER41B LTR ERV1 1 528 -107 706 116 0 27 chr20 65734912 65735024 -6418858 - AluSg/x SINE Alu 0 309 201 3291 110 55 19 chr20 65735070 65735598 -6418284 + LTR10A LTR ERV1 1 547 -62 1556 125 0 0 chr20 65735610 65735818 -6418064 - AluSq SINE Alu -105 208 1 712 114 44 0 chr20 65735819 65735933 -6417949 + MER41B LTR ERV1 517 635 0 274 263 144 8 chr20 65735941 65736059 -6417823 - MIR SINE MIR -12 250 117 234 263 18 3 chr20 65736081 65736213 -6417669 - MLT1L LTR MaLR -438 177 14 1045 176 63 148 chr20 65736309 65736735 -6417147 - MLT1B LTR MaLR 0 390 1 226 336 19 9 chr20 65738066 65738173 -6415709 + LTR16A LTR ERVL 2 109 -341 1329 276 78 27 chr20 65738251 65738701 -6415181 - MLT1E2 LTR MaLR -64 562 90 2400 169 64 4 chr20 65738705 65739156 -6414726 + MER9 LTR ERVK 34 511 0 334 266 0 0 chr20 65739156 65739235 -6414647 - MLT1E2 LTR MaLR -404 101 23 219 373 20 0 chr20 65739355 65739457 -6414425 - L2 LINE L2 -22 3291 3188 789 202 62 6 chr20 65739457 65739635 -6414247 + MER5A DNA MER1_type 2 189 0 785 230 36 41 chr20 65739657 65739853 -6414029 - MER58A DNA MER1_type -2 222 28 2104 198 65 42 chr20 65740198 65740692 -6413190 + MLT1D LTR MaLR 1 505 0 339 343 47 12 chr20 65740702 65740871 -6413011 - MER117 DNA MER1_type 0 197 23 560 279 14 0 chr20 65740881 65741021 -6412861 - LTR67 LTR ERVL -14 543 402 2450 88 7 0 chr20 65741189 65741496 -6412386 - AluSc SINE Alu 0 309 1 696 176 30 8 chr20 65741707 65741838 -6412044 - AluJo SINE Alu -177 135 2 229 217 0 7 chr20 65741895 65742007 -6411875 + MER5A DNA MER1_type 10 182 -7 4543 62 4 0 chr20 65742158 65742710 -6411172 + MER41A LTR ERV1 1 554 0 1445 196 55 0 chr20 65743734 65744005 -6409877 + L1MB7 LINE L1 5883 6168 -16 734 169 5 33 chr20 65744242 65744426 -6409456 + GA-rich Low_complexity Low_complexity 2 180 0 180 158 26 0 chr20 65744555 65744593 -6409289 - L2 LINE L2 -4 3268 3230 944 118 0 7 chr20 65744797 65744932 -6408950 + AluSg/x SINE Alu 160 293 -17 2307 84 0 10 chr20 65745303 65745599 -6408283 - AluSc SINE Alu -16 293 1 307 294 84 17 chr20 65745873 65746010 -6407872 + MIR SINE MIR 17 160 -65 2249 212 51 2 chr20 65746358 65746868 -6407014 + L1MD3 LINE L1 7447 7981 -14 1894 161 26 7 chr20 65746886 65747191 -6406691 + AluJb SINE Alu 1 311 -1 1034 274 118 15 chr20 65747694 65748102 -6405780 + LTR16A LTR ERVL 1 450 0 337 200 14 14 chr20 65748162 65748232 -6405650 + MLT1J LTR MaLR 109 178 -333 263 271 102 33 chr20 65748353 65748575 -6405307 + MLT1L LTR MaLR 267 507 -4 224 219 172 0 chr20 65749442 65749506 -6404376 - L2 LINE L2 0 3313 3239 683 283 46 30 chr20 65749570 65749927 -6403955 - MLT1J LTR MaLR -34 477 71 2806 84 0 3 chr20 65750226 65750582 -6403300 + THE1A LTR MaLR 1 355 0 476 274 28 11 chr20 65750693 65750872 -6403010 + MIR SINE MIR 81 262 0 469 286 58 19 chr20 65751806 65751960 -6401922 - MLT1K LTR MaLR -68 520 361 262 156 0 78 chr20 65752068 65752132 -6401750 + MER3 DNA MER1_type 1 59 -150 1357 330 73 30 chr20 65752717 65753819 -6400063 - L2 LINE L2 -489 2825 1676 7497 55 17 5 chr20 65754197 65755880 -6398002 + L1PA5 LINE L1 4456 6146 -8 2248 252 41 23 chr20 65756202 65756974 -6396908 - L1MB7 LINE L1 0 6291 5556 205 320 93 0 chr20 65757021 65757096 -6396786 - L2 LINE L2 -44 3228 3147 754 285 50 83 chr20 65757306 65757811 -6396071 - MLT1J LTR MaLR -14 497 10 651 304 75 31 chr20 65757890 65758209 -6395673 - LTR16C LTR ERVL -3 488 156 417 119 48 36 chr20 65758538 65758622 -6395260 - L1MB8 LINE L1 -1 6177 6093 1258 169 12 46 chr20 65758629 65758918 -6394964 - L1MB7 LINE L1 -745 5401 5138 2199 117 0 23 chr20 65758918 65759225 -6394657 - AluSx SINE Alu -12 300 1 1258 169 12 46 chr20 65759225 65759257 -6394625 - L1MB7 LINE L1 -1008 5138 5106 231 369 18 0 chr20 65759326 65759437 -6394445 - L2 LINE L2 -214 3058 2946 253 184 0 0 chr20 65760023 65760061 -6393821 + LTR56 LTR ERV1 349 386 -59 421 243 113 27 chr20 65760142 65760530 -6393352 - L1ME LINE L1 -550 5612 5176 348 24 0 0 chr20 65760686 65760727 -6393155 + (TG)n Simple_repeat Simple_repeat 2 42 0 204 339 67 38 chr20 65760841 65761183 -6392699 + L2 LINE L2 2378 2729 -585 598 280 51 94 chr20 65761531 65761902 -6391980 + L2 LINE L2 2909 3263 -9 180 200 0 0 chr20 65761909 65761949 -6391933 + (CAAA)n Simple_repeat Simple_repeat 3 42 0 317 204 0 10 chr20 65762463 65762566 -6391316 + CT-rich Low_complexity Low_complexity 2 103 0 360 0 0 0 chr20 65764589 65764629 -6389253 + (TG)n Simple_repeat Simple_repeat 2 41 0 277 292 46 0 chr20 65765555 65765669 -6388213 - MIR SINE MIR -64 144 73 331 238 29 57 chr20 65765846 65765951 -6387931 - MER5A DNA MER1_type -84 105 4 508 309 72 0 chr20 65766008 65766202 -6387680 - MIR SINE MIR -20 242 35 632 273 137 29 chr20 65766834 65767337 -6386545 + L2 LINE L2 2646 3200 -113 456 277 24 61 chr20 65767889 65768102 -6385780 - MIR SINE MIR 0 262 58 201 284 15 0 chr20 65768267 65768334 -6385548 + MIR SINE MIR 77 144 -118 986 90 8 8 chr20 65768835 65768968 -6384914 + AluSq/x SINE Alu 1 133 -179 2100 132 7 3 chr20 65768971 65769267 -6384615 + AluSx SINE Alu 2 298 -14 950 196 46 21 chr20 65769589 65769783 -6384099 - MER20 DNA MER1_type -2 217 19 1289 187 139 12 chr20 65770216 65770467 -6383415 + AluSx SINE Alu 12 294 -18 273 315 145 15 chr20 65770572 65770772 -6383110 + MIR SINE MIR 27 252 -10 22 0 0 0 chr20 65770965 65770987 -6382895 + AT_rich Low_complexity Low_complexity 1 22 0 451 244 92 0 chr20 65772002 65772133 -6381749 + MLT1K LTR MaLR 369 511 -77 184 271 85 70 chr20 65773090 65773219 -6380663 + L2 LINE L2 3142 3272 0 292 289 9 18 chr20 65773367 65773481 -6380401 + MIR SINE MIR 116 228 -34 401 298 172 0 chr20 65773562 65773713 -6380169 - MER5A DNA MER1_type 0 189 13 282 264 101 39 chr20 65774234 65774363 -6379519 - MER5B DNA MER1_type -1 177 41 251 284 25 0 chr20 65774986 65775067 -6378815 + MIR SINE MIR 81 163 -99 349 294 208 59 chr20 65775357 65775829 -6378053 - MLT1K LTR MaLR -6 582 41 2142 108 0 0 chr20 65776445 65776759 -6377123 - AluSx SINE Alu 0 318 5 1625 239 52 4 chr20 65776767 65777228 -6376654 + L1MB7 LINE L1 5692 6174 -10 384 181 75 131 chr20 65777674 65777873 -6376009 - MER53 DNA DNA -1 188 1 417 276 32 0 chr20 65779427 65779550 -6374332 - MIR SINE MIR -116 146 20 319 298 32 16 chr20 65780456 65780580 -6373302 + MIR3 SINE MIR 4 129 -79 1655 145 57 27 chr20 65780600 65780896 -6372986 - AluJb SINE Alu -2 310 6 264 130 0 0 chr20 65781951 65781997 -6371885 + (TTCA)n Simple_repeat Simple_repeat 1 46 0 1175 161 0 54 chr20 65781997 65782221 -6371661 - AluJb SINE Alu -31 281 70 284 233 9 78 chr20 65783150 65783248 -6370634 - LTR33 LTR ERVL -6 515 426 1511 179 72 30 chr20 65783248 65783662 -6370220 + MER61D LTR ERV1 1 501 0 316 229 37 46 chr20 65783788 65783897 -6369985 - LTR33 LTR ERVL -306 215 108 652 155 90 176 chr20 65783897 65784175 -6369707 + LTR49-int LTR ERV1 3383 3636 -2695 233 240 135 0 chr20 65784175 65784279 -6369603 - LTR33 LTR ERVL -399 122 5 261 318 45 0 chr20 65784285 65784395 -6369487 + L2 LINE L2 3153 3267 -5 2243 104 3 0 chr20 65785236 65785524 -6368358 + AluSc SINE Alu 1 289 -20 331 286 27 9 chr20 65785768 65785880 -6368002 - L2 LINE L2 -1 3312 3199 2520 189 209 48 chr20 65785928 65786959 -6366923 + MER52C LTR ERV1 1 1275 -3 4630 135 18 9 chr20 65786968 65787970 -6365912 + MER52C-int LTR ERV1 6 1100 -5991 * 14145 119 16 9 chr20 65787967 65788823 -6365059 + MER52A-int LTR ERV1 4709 5558 -1533 3406 32 0 2 chr20 65788823 65789224 -6364658 + L1PA4 LINE L1 5751 6150 -5 14145 119 16 9 chr20 65789224 65790378 -6363504 + MER52A-int LTR ERV1 5558 6732 -359 1885 112 0 4 chr20 65790374 65790623 -6363259 + MER52A-int LTR ERV1 6843 7090 -1 * 4231 196 80 55 chr20 65790624 65791785 -6362097 + MER52A LTR ERV1 1 1190 -565 343 197 0 0 chr20 65791789 65791855 -6362027 + MER52A LTR ERV1 1690 1755 0 2455 148 70 27 chr20 65791884 65792330 -6361552 - LTR24 LTR ERV1 -2 465 1 1286 215 12 0 chr20 65792358 65792609 -6361273 + MER63B DNA MER1_type 1 254 -182 1465 133 11 64 chr20 65792774 65793038 -6360844 + AluJb SINE Alu 42 291 -21 1831 241 101 48 chr20 65793203 65793528 -6360354 + L1MC4 LINE L1 6775 7081 -961 2465 164 26 2 chr20 65793528 65793944 -6359938 + MSTB LTR MaLR 1 426 0 1831 241 101 48 chr20 65793944 65794320 -6359562 + L1MC4 LINE L1 7081 7513 -529 401 243 7 0 chr20 65794340 65794780 -6359102 + (TA)n Simple_repeat Simple_repeat 1 443 0 213 211 0 0 chr20 65794790 65794842 -6359040 + (TAGA)n Simple_repeat Simple_repeat 1 52 0 620 173 6 0 chr20 65794844 65795023 -6358859 + (TA)n Simple_repeat Simple_repeat 1 180 0 750 186 0 0 chr20 65795038 65795713 -6358169 + (TA)n Simple_repeat Simple_repeat 1 675 0 330 243 0 0 chr20 65795780 65795957 -6357925 + (TA)n Simple_repeat Simple_repeat 1 177 0 249 182 0 0 chr20 65796012 65796056 -6357826 + MER94 DNA DNA 1 44 -90 291 104 0 0 chr20 65796120 65796168 -6357714 + (TA)n Simple_repeat Simple_repeat 1 48 0 189 0 0 0 chr20 65796167 65796188 -6357694 + (GA)n Simple_repeat Simple_repeat 2 22 0 * 1851 178 17 3 chr20 65796190 65796538 -6357344 - MLT2D LTR ERVL -61 353 1 3215 157 26 39 chr20 65796689 65797962 -6355920 + L1MA6 LINE L1 4652 5888 -412 1060 153 10 79 chr20 65797966 65798168 -6355714 + AluJo SINE Alu 7 194 -118 356 126 23 51 chr20 65798173 65798348 -6355534 + (TA)n Simple_repeat Simple_repeat 2 171 0 307 134 0 75 chr20 65798393 65798579 -6355303 + (TA)n Simple_repeat Simple_repeat 2 173 0 351 104 65 77 chr20 65798609 65799298 -6354584 + (ATATG)n Simple_repeat Simple_repeat 1 680 0 * 392 120 2 83 chr20 65799280 65799806 -6354076 + (TA)n Simple_repeat Simple_repeat 1 483 0 361 167 29 48 chr20 65799809 65800124 -6353758 + (CATATA)n Simple_repeat Simple_repeat 1 308 0 301 139 0 82 chr20 65800140 65800334 -6353548 + (CATATA)n Simple_repeat Simple_repeat 2 179 0 317 106 0 129 chr20 65800338 65800423 -6353459 + L1MA5 LINE L1 6227 6300 0 651 251 28 45 chr20 65800856 65801035 -6352847 + MIR SINE MIR 1 176 -86 233 200 31 0 chr20 65801079 65801144 -6352738 + (CATATA)n Simple_repeat Simple_repeat 2 68 0 213 186 34 85 chr20 65802450 65802509 -6351373 + L2 LINE L2 3215 3270 -2 201 135 0 27 chr20 65802909 65802946 -6350936 - MIR SINE MIR -65 197 162 410 307 75 24 chr20 65803700 65803912 -6349970 - MLT1K LTR MaLR -302 286 64 4324 197 93 7 chr20 65804077 65805035 -6348847 - MER45B DNA AcHobo 0 1040 1 502 245 106 32 chr20 65805437 65805625 -6348257 - MIR SINE MIR -33 229 28 791 208 17 0 chr20 65805735 65805908 -6347974 + MER5B DNA MER1_type 1 176 -2 559 258 6 0 chr20 65806075 65806234 -6347648 - Zaphod DNA AcHobo -10 4021 3862 477 121 12 0 chr20 65806256 65806339 -6347543 - Zaphod DNA AcHobo -1145 2886 2803 503 234 77 34 chr20 65806699 65806908 -6346974 - MER115 DNA AcHobo -376 317 100 314 301 72 20 chr20 65807017 65807170 -6346712 - MIR SINE MIR -81 181 21 756 135 0 123 chr20 65807388 65807404 -6346478 - AluJb SINE Alu -27 285 269 1296 122 186 76 chr20 65807404 65807732 -6346150 - THE1B LTR MaLR 0 364 1 756 135 0 123 chr20 65807732 65807885 -6345997 - AluJb SINE Alu -43 269 137 210 171 0 0 chr20 65808041 65808082 -6345800 + (CA)n Simple_repeat Simple_repeat 2 42 0 302 294 20 0 chr20 65808082 65808184 -6345698 + Charlie2 DNA MER1_type 223 326 -2536 2340 231 85 21 chr20 65808186 65808620 -6345262 + Charlie2 DNA MER1_type 1856 2261 -601 2336 85 3 0 chr20 65808620 65808915 -6344967 + AluSx SINE Alu 1 296 -16 2340 231 85 21 chr20 65808915 65809050 -6344832 + Charlie2 DNA MER1_type 2261 2386 -476 324 70 0 0 chr20 65809050 65809093 -6344789 + (TG)n Simple_repeat Simple_repeat 2 44 0 2340 231 85 21 chr20 65809093 65809412 -6344470 + Charlie2 DNA MER1_type 2386 2802 -60 1794 182 3 10 chr20 65809413 65809715 -6344167 + AluJb SINE Alu 1 300 -12 1720 167 64 6 chr20 65809732 65810074 -6343808 + MLT1A1 LTR MaLR 1 362 -3 281 316 15 44 chr20 65810325 65810461 -6343421 + MIR SINE MIR 31 162 -100 2332 106 51 11 chr20 65810707 65811057 -6342825 + THE1B LTR MaLR 1 364 0 529 271 39 61 chr20 65811719 65811948 -6341934 + MIR SINE MIR 23 246 -16 367 358 78 10 chr20 65811983 65812176 -6341706 + L2 LINE L2 2838 3043 -229 795 313 105 16 chr20 65812304 65812752 -6341130 - MLT1K LTR MaLR -93 495 8 286 331 85 8 chr20 65812808 65812938 -6340944 + L2 LINE L2 3128 3267 -5 303 307 80 25 chr20 65813854 65814017 -6339865 - MLT1K LTR MaLR -256 332 161 624 292 66 0 chr20 65814292 65814509 -6339373 - MIR SINE MIR -12 250 16 449 275 183 0 chr20 65814602 65814744 -6339138 + MIR SINE MIR 1 168 -94 283 303 0 0 chr20 65815037 65815113 -6338769 - MIR SINE MIR -14 248 173 351 336 32 5 chr20 65815191 65815408 -6338474 + L1ME2 LINE L1 5607 5829 -292 326 273 62 8 chr20 65815872 65816000 -6337882 + Charlie8 DNA MER1_type 8 142 -2275 2511 62 10 0 chr20 65816000 65816308 -6337574 + AluSp SINE Alu 2 312 -1 569 263 17 47 chr20 65816335 65816567 -6337315 + L1ME2 LINE L1 5928 6152 -12 313 158 0 0 chr20 65816813 65816870 -6337012 + Charlie8 DNA MER1_type 209 265 -2152 406 300 84 63 chr20 65817482 65817951 -6335931 + MLT1L LTR MaLR 120 510 -1 1646 181 14 24 chr20 65818091 65818384 -6335498 - AluJb SINE Alu -22 290 1 196 312 118 21 chr20 65818766 65818859 -6335023 + MIR SINE MIR 22 123 -85 * 208 313 47 0 chr20 65818840 65818904 -6334978 - L2 LINE L2 -5 3267 3201 846 207 0 0 chr20 65818918 65819068 -6334814 + FRAM SINE Alu 1 146 -30 637 200 119 0 chr20 65819340 65819500 -6334382 - MER3 DNA MER1_type -30 179 1 232 196 43 0 chr20 65819515 65819561 -6334321 + MER66B LTR ERV1 292 339 -147 23 33 0 0 chr20 65819561 65819591 -6334291 + AT_rich Low_complexity Low_complexity 1 30 0 2073 123 24 3 chr20 65819790 65820082 -6333800 + AluSx SINE Alu 1 298 -14 22 35 0 0 chr20 65820614 65820643 -6333239 + AT_rich Low_complexity Low_complexity 1 29 0 652 307 6 0 chr20 65822165 65822350 -6331532 + MIR SINE MIR 42 227 -35 726 294 49 9 chr20 65822842 65823250 -6330632 - LTR33 LTR ERVL 0 521 57 436 224 80 8 chr20 65823282 65823407 -6330475 + MIR SINE MIR 128 261 -1 907 252 38 0 chr20 65824164 65824374 -6329508 + MIR SINE MIR 35 252 -10 * 1113 254 70 65 chr20 65824352 65824781 -6329101 - L2 LINE L2 0 3313 2883 409 219 102 0 chr20 65824771 65824908 -6328974 - L2 LINE L2 -749 2565 2415 * 522 196 0 0 chr20 65825048 65825155 -6328727 + (CATATA)n Simple_repeat Simple_repeat 2 108 0 4047 30 0 0 chr20 65825330 65825844 -6328038 + L1PA3 LINE L1 5680 6193 0 184 283 100 17 chr20 65826054 65826114 -6327768 - MIR SINE MIR -82 126 62 761 171 0 0 chr20 65826372 65826489 -6327393 + FLAM_C SINE Alu 1 117 -26 29 70 0 0 chr20 65826489 65826546 -6327336 + AT_rich Low_complexity Low_complexity 1 57 0 623 300 26 9 chr20 65826770 65827003 -6326879 - L1MC/D LINE L1 -2040 5768 5532 305 253 144 52 chr20 65827658 65827852 -6326030 - MLT1K LTR MaLR 0 588 377 2154 122 57 25 chr20 65828151 65828504 -6325378 + THE1B LTR MaLR 1 364 0 502 185 0 25 chr20 65829005 65829124 -6324758 + L1MB8 LINE L1 5713 5828 -350 * 4214 165 47 25 chr20 65829112 65830348 -6323534 + L1MB5 LINE L1 4906 6168 -6 1436 177 55 20 chr20 65830371 65830715 -6323167 + L1MB8 LINE L1 5821 6176 -2 243 0 0 0 chr20 65830718 65830745 -6323137 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 742 204 60 40 chr20 65830745 65830946 -6322936 + MLT1E3 LTR MaLR 420 624 0 276 238 22 116 chr20 65831188 65831369 -6322513 + L2 LINE L2 3093 3256 -57 1123 196 60 9 chr20 65831369 65831676 -6322206 + L1MA6 LINE L1 5979 6297 -3 8247 165 38 22 chr20 65831683 65834302 -6319580 + L1PB1 LINE L1 7 2948 -3914 2275 98 17 0 chr20 65834302 65834597 -6319285 + AluY SINE Alu 1 300 -11 8247 165 38 22 chr20 65834597 65836063 -6317819 + L1PB1 LINE L1 2948 4390 -2472 4351 166 10 1 chr20 65836040 65836101 -6317781 + L1PB1 LINE L1 5053 5112 -1755 * 189 0 0 0 chr20 65836101 65836122 -6317760 + (TAAAA)n Simple_repeat Simple_repeat 2 22 0 4351 166 10 1 chr20 65836122 65837501 -6316381 + L1PB1 LINE L1 5112 6507 -360 204 194 0 32 chr20 65837501 65837563 -6316319 + (TAGA)n Simple_repeat Simple_repeat 1 60 0 2129 154 0 18 chr20 65837571 65837954 -6315928 + L1PB1 LINE L1 6492 6867 0 565 244 39 8 chr20 65838116 65838243 -6315639 + L2 LINE L2 3183 3313 0 766 225 20 5 chr20 65838350 65838550 -6315332 - MER20 DNA MER1_type -1 218 16 500 204 113 7 chr20 65839903 65840045 -6313837 + LTR33 LTR ERVL 45 201 -320 1466 232 25 0 chr20 65840060 65840413 -6313469 - MLT1B LTR MaLR -27 363 2 455 133 10 82 chr20 65840979 65841077 -6312805 - MER20 DNA MER1_type -6 213 123 1430 290 75 54 chr20 65841138 65841527 -6312355 + MER115 DNA AcHobo 14 424 -269 2419 76 3 0 chr20 65841527 65841831 -6312051 + AluY SINE Alu 1 305 -6 1430 290 75 54 chr20 65841831 65842107 -6311775 + MER115 DNA AcHobo 424 693 0 3298 197 24 26 chr20 65843771 65843914 -6309968 - L1MB7 LINE L1 -16 6168 6026 1901 159 7 0 chr20 65843914 65844391 -6309491 + AluSx SINE Alu 1 479 0 1080 120 11 0 chr20 65844216 65844394 -6309488 + (GAAA)n Simple_repeat Simple_repeat 4 183 0 3298 197 24 26 chr20 65844391 65845012 -6308870 - L1MB7 LINE L1 -158 6026 5404 357 316 75 73 chr20 65845142 65845186 -6308696 - L2 LINE L2 -244 3028 2986 2057 137 0 0 chr20 65845186 65845493 -6308389 + AluSx SINE Alu 1 307 -5 357 316 75 73 chr20 65845493 65845873 -6308009 - L2 LINE L2 -286 2986 2596 2134 104 10 0 chr20 65846304 65846601 -6307281 + AluSg SINE Alu 1 300 -10 2935 171 35 102 chr20 65847236 65847980 -6305902 + LTR8A LTR ERV1 34 727 0 225 250 52 66 chr20 65848230 65848366 -6305516 + LTR67 LTR ERVL 412 545 -12 776 277 68 63 chr20 65848405 65848749 -6305133 - L2 LINE L2 -572 2742 2394 2486 140 52 5 chr20 65848749 65849156 -6304726 + MSTB LTR MaLR 1 426 0 776 277 68 63 chr20 65849156 65849222 -6304660 - L2 LINE L2 -920 2394 2330 2105 125 3 0 chr20 65849260 65849564 -6304318 - AluSx SINE Alu -7 305 1 310 310 225 0 chr20 65849726 65849868 -6304014 + MIR SINE MIR 25 198 -64 858 149 32 0 chr20 65849878 65850032 -6303850 + L1MB7 LINE L1 6003 6161 -23 1963 103 3 56 chr20 65850159 65850480 -6303402 + AluSx SINE Alu 1 304 -8 598 163 0 0 chr20 65850802 65850894 -6302988 - AluJb SINE Alu -22 290 199 1082 198 8 58 chr20 65850906 65851089 -6302793 + MLT1F1 LTR MaLR 333 503 -64 2106 85 43 0 chr20 65851089 65851371 -6302511 - AluY SINE Alu -17 294 1 1082 198 8 58 chr20 65851371 65851429 -6302453 + MLT1F1 LTR MaLR 503 562 -5 2317 182 62 18 chr20 65851440 65852066 -6301816 - LTR8A LTR ERV1 0 691 1 1812 152 26 13 chr20 65852168 65852471 -6301411 + AluJb SINE Alu 1 307 -5 36663 98 11 11 chr20 65852476 65854608 -6299274 + L1P LINE L1 13 2143 -4003 2310 79 0 0 chr20 65854608 65854899 -6298983 - AluY SINE Alu -20 291 1 36663 98 11 11 chr20 65854899 65857969 -6295913 + L1P LINE L1 2143 5220 -926 1720 115 0 0 chr20 65857969 65858204 -6295678 - AluSq SINE Alu -76 237 3 272 29 0 0 chr20 65858309 65858344 -6295538 - L1P LINE L1 -1149 4997 4963 1339 98 128 0 chr20 65858456 65858660 -6295222 - MER30 DNA MER1_type 0 230 1 428 256 66 36 chr20 65858674 65858811 -6295071 + MER102a DNA MER1_type 7 147 -183 1125 202 184 56 chr20 65858834 65859233 -6294649 - MLT1H LTR MaLR -54 495 1 376 283 64 16 chr20 65859236 65859423 -6294459 + MER102a DNA MER1_type 135 330 0 299 270 0 14 chr20 65860392 65860466 -6293416 + MIR SINE MIR 103 175 -87 190 136 45 0 chr20 65860544 65860588 -6293294 + (TAA)n Simple_repeat Simple_repeat 3 48 0 406 303 46 51 chr20 65860639 65860685 -6293197 - MIR SINE MIR -22 240 195 2064 117 20 0 chr20 65860685 65860984 -6292898 - AluSx SINE Alu -7 305 1 406 303 46 51 chr20 65860984 65861132 -6292750 - MIR SINE MIR -67 195 47 231 146 0 0 chr20 65861608 65861649 -6292233 + (CA)n Simple_repeat Simple_repeat 1 41 0 417 344 120 10 chr20 65861953 65862337 -6291545 + L2 LINE L2 2550 2975 -339 331 290 76 35 chr20 65862446 65862591 -6291291 + L2 LINE L2 3122 3272 0 601 218 26 179 chr20 65862665 65862973 -6290909 - MIR SINE MIR 0 262 2 1030 71 0 0 chr20 65863053 65863180 -6290702 + AluSx SINE Alu 2 128 -185 249 33 0 0 chr20 65863180 65863210 -6290672 + (TA)n Simple_repeat Simple_repeat 1 30 0 301 258 0 0 chr20 65863223 65863312 -6290570 - L1MC4 LINE L1 -1339 6703 6615 224 238 0 0 chr20 65863313 65863355 -6290527 + (TATATG)n Simple_repeat Simple_repeat 2 43 0 230 152 0 0 chr20 65863355 65863401 -6290481 + LTR66 LTR ERVL 394 439 -171 1191 111 0 0 chr20 65863428 65863599 -6290283 + AluSx SINE Alu 135 305 -7 435 256 96 45 chr20 65863910 65863946 -6289936 + L2 LINE L2 3150 3183 -130 3301 194 47 13 chr20 65863946 65864633 -6289249 + MER67C LTR ERV1 1 710 0 435 256 96 45 chr20 65864633 65864752 -6289130 + L2 LINE L2 3183 3313 0 236 28 56 0 chr20 65865171 65865207 -6288675 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 1539 154 0 83 chr20 65865253 65865591 -6288291 - AluSx SINE Alu 0 312 3 909 258 14 5 chr20 65865783 65865992 -6287890 - MIR SINE MIR -36 226 16 439 371 30 4 chr20 65866093 65866325 -6287557 - MIR SINE MIR -11 251 14 194 262 0 0 chr20 65866594 65866636 -6287246 + L2 LINE L2 3264 3305 -8 348 333 61 20 chr20 65866892 65867090 -6286792 - MIR SINE MIR -43 219 14 186 262 0 0 chr20 65867136 65867178 -6286704 + L2 LINE L2 3272 3313 0 232 290 43 21 chr20 65867314 65867407 -6286475 + L1MC/D LINE L1 5722 5816 -1992 2022 99 0 7 chr20 65867469 65867751 -6286131 + AluSx SINE Alu 1 280 -32 1227 243 181 33 chr20 65867760 65868242 -6285640 - MLT1F1 LTR MaLR -38 555 3 214 238 0 0 chr20 65869489 65869531 -6284351 + (CACG)n Simple_repeat Simple_repeat 4 45 0 353 257 104 73 chr20 65869751 65869819 -6284063 + L1MC4a LINE L1 5161 5225 -937 2071 121 0 0 chr20 65869819 65870109 -6283773 + AluSx SINE Alu 1 290 -22 353 257 104 73 chr20 65870109 65870288 -6283594 + L1MC4a LINE L1 5225 5415 -747 403 217 0 66 chr20 65870288 65870394 -6283488 + MLT1D LTR MaLR 1 99 -406 1741 175 14 0 chr20 65870424 65870716 -6283166 + AluJo SINE Alu 1 296 -16 546 176 8 40 chr20 65870716 65870841 -6283041 + MER45 DNA AcHobo 1403 1523 -58 852 160 13 0 chr20 65870847 65871003 -6282879 - FRAM SINE Alu -1 175 18 543 165 0 11 chr20 65871003 65871089 -6282793 + Tigger2 DNA MER2_type 2345 2430 -284 2012 101 0 57 chr20 65871089 65871405 -6282477 - AluSq SINE Alu -15 298 1 2179 112 0 0 chr20 65871512 65871817 -6282065 + AluSx SINE Alu 1 305 -7 899 257 74 91 chr20 65871835 65872306 -6281576 + L1MC4a LINE L1 5555 6017 -104 302 269 0 13 chr20 65872681 65872759 -6281123 - Charlie8 DNA MER1_type -989 1428 1360 2174 62 0 0 chr20 65872765 65873039 -6280843 + AluY SINE Alu 34 307 -4 561 318 46 0 chr20 65873149 65873344 -6280538 - MIR SINE MIR -19 243 40 1736 147 13 17 chr20 65873582 65873882 -6280000 - AluJb SINE Alu -13 299 1 1981 250 81 18 chr20 65873888 65874493 -6279389 - L1ME1 LINE L1 -3 6163 5521 29 78 0 0 chr20 65874861 65874925 -6278957 + GC_rich Low_complexity Low_complexity 1 64 0 202 211 19 0 chr20 65875081 65875133 -6278749 + C-rich Low_complexity Low_complexity 4 56 0 241 338 0 0 chr20 65875358 65875429 -6278453 - MIR SINE MIR -56 152 82 366 226 156 44 chr20 65875551 65875821 -6278061 - MER113 DNA MER1_type? -175 346 47 181 329 60 48 chr20 65875872 65876039 -6277843 + MIR SINE MIR 32 200 -62 266 293 65 24 chr20 65876240 65876363 -6277519 + L2 LINE L2 2989 3116 -156 435 272 218 0 chr20 65876456 65876662 -6277220 + MIR SINE MIR 4 254 -8 688 296 96 17 chr20 65877167 65877468 -6276414 + L2 LINE L2 2971 3295 -18 931 230 56 32 chr20 65877478 65877664 -6276218 + MIR SINE MIR 3 198 -64 648 167 45 53 chr20 65877664 65877690 -6276192 - FLAM_C SINE Alu -171 131 106 2189 108 0 0 chr20 65877690 65877997 -6275885 + AluSx SINE Alu 1 307 -5 648 167 45 53 chr20 65877997 65878102 -6275780 - FLAM_C SINE Alu -196 106 1 931 230 56 32 chr20 65878102 65878167 -6275715 + MIR SINE MIR 198 260 -2 209 318 0 16 chr20 65878405 65878468 -6275414 + L2 LINE L2 3211 3272 0 405 324 167 5 chr20 65879871 65880081 -6273801 + MIR SINE MIR 5 248 -14 2233 156 69 45 chr20 65880112 65880605 -6273277 - MLT1D LTR MaLR 0 505 1 1889 133 0 4 chr20 65880685 65880964 -6272918 + AluSg SINE Alu 18 295 -15 1794 130 0 33 chr20 65881339 65881498 -6272384 - AluJo SINE Alu -21 291 145 2044 103 3 0 chr20 65881498 65881798 -6272084 - AluSc SINE Alu -8 301 1 1794 130 0 33 chr20 65881798 65881939 -6271943 - AluJo SINE Alu -167 145 1 250 256 24 0 chr20 65883155 65883237 -6270645 + MER113 DNA MER1_type? 135 218 -303 2100 99 10 0 chr20 65883352 65883644 -6270238 + AluSx SINE Alu 1 295 -17 210 71 0 0 chr20 65884325 65884353 -6269529 + (A)n Simple_repeat Simple_repeat 1 28 0 227 230 292 26 chr20 65886771 65886884 -6266998 - MIR SINE MIR -91 171 29 502 258 115 79 chr20 65887142 65887176 -6266706 + L1MC4 LINE L1 7277 7308 -734 2307 71 3 0 chr20 65887176 65887471 -6266411 + AluY SINE Alu 1 296 -15 502 258 115 79 chr20 65887471 65887937 -6265945 + L1MC4 LINE L1 7308 7900 -142 189 0 0 0 chr20 65888529 65888550 -6265332 + (A)n Simple_repeat Simple_repeat 1 21 0 1890 141 30 0 chr20 65889664 65889962 -6263920 + AluJo SINE Alu 1 307 -5 315 0 0 0 chr20 65890012 65890047 -6263835 + (CA)n Simple_repeat Simple_repeat 2 36 0 236 57 57 0 chr20 65890188 65890223 -6263659 - HSMAR1 DNA Mariner -1250 37 1 865 133 0 22 chr20 65890596 65890731 -6263151 - FLAM_C SINE Alu -1 132 1 2150 131 0 0 chr20 65890761 65891067 -6262815 + AluSq SINE Alu 1 306 -7 1531 150 6 70 chr20 65891127 65891440 -6262442 - AluJo SINE Alu -19 293 1 1944 121 7 24 chr20 65892793 65893091 -6260791 + AluSx SINE Alu 1 293 -19 1120 151 65 0 chr20 65893091 65893290 -6260592 + AluJb SINE Alu 89 300 -12 953 159 94 70 chr20 65893300 65893502 -6260380 + L1MC3 LINE L1 5176 5371 -914 2304 79 0 0 chr20 65893502 65893792 -6260090 + AluSc SINE Alu 1 290 -19 953 159 94 70 chr20 65893792 65893887 -6259995 + L1MC3 LINE L1 5371 5480 -805 1436 184 67 3 chr20 65893887 65894169 -6259713 + AluJb SINE Alu 1 300 -12 953 159 94 70 chr20 65894169 65894229 -6259653 + L1MC3 LINE L1 5480 5537 -748 1019 169 44 0 chr20 65894250 65894433 -6259449 - L1MC3 LINE L1 -1381 6404 6214 * 1171 162 92 34 chr20 65894430 65895675 -6258207 + L1MC3 LINE L1 5546 6718 -1067 2379 102 0 3 chr20 65895675 65895979 -6257903 + AluSx SINE Alu 1 303 -9 1171 162 92 34 chr20 65895979 65896055 -6257827 + L1MC3 LINE L1 6718 6788 -997 254 160 0 20 chr20 65896055 65896070 -6257812 + AluSp SINE Alu 122 135 -168 2527 84 0 0 chr20 65896070 65896380 -6257502 + AluSg SINE Alu 1 310 0 1171 162 92 34 chr20 65896105 65896479 -6257403 + L1MC3 LINE L1 6788 7139 -646 189 74 0 0 chr20 65896479 65896506 -6257376 + (TAAA)n Simple_repeat Simple_repeat 1 27 0 1171 162 92 34 chr20 65896506 65896997 -6256885 + L1MC3 LINE L1 7139 7767 -18 661 150 125 17 chr20 65896997 65897117 -6256765 + FLAM_A SINE Alu 1 133 0 1171 162 92 34 chr20 65897117 65897135 -6256747 + L1MC3 LINE L1 7767 7783 -2 2485 86 0 0 chr20 65897879 65898183 -6255699 + AluSg SINE Alu 1 304 -6 705 198 71 22 chr20 65898714 65898896 -6254986 - LTR48B LTR ERV1 -71 573 383 345 279 76 35 chr20 65901160 65901332 -6252550 + MIR SINE MIR 77 255 -7 2432 87 3 0 chr20 65901458 65901756 -6252126 - AluSp SINE Alu -14 299 1 2226 98 0 3 chr20 65903162 65903447 -6250435 - AluSg1 SINE Alu -25 284 1 899 286 142 30 chr20 65904371 65904525 -6249357 + L2 LINE L2 1536 1671 -1643 2335 108 0 0 chr20 65904525 65904830 -6249052 + AluSq SINE Alu 1 305 -8 899 286 142 30 chr20 65904830 65905428 -6248454 + L2 LINE L2 1671 2372 -942 1995 258 87 28 chr20 65905429 65906301 -6247581 + L2 LINE L2 2093 3013 -300 2368 83 7 3 chr20 65906301 65906602 -6247280 - AluSp SINE Alu -11 302 1 352 155 6 0 chr20 65906622 65906688 -6247194 + Alu SINE Alu 244 293 -9 196 167 24 24 chr20 65907044 65907086 -6246796 - MER5B DNA MER1_type -133 45 4 186 260 0 0 chr20 65907347 65907397 -6246485 + MER5A DNA MER1_type 56 105 -84 403 298 94 18 chr20 65907447 65907618 -6246264 - MER5A DNA MER1_type -3 186 3 180 258 0 48 chr20 65907790 65907852 -6246030 + L2 LINE L2 3180 3238 -75 255 170 0 0 chr20 65909113 65909160 -6244722 + (CATATA)n Simple_repeat Simple_repeat 4 50 0 186 43 0 0 chr20 65909166 65909189 -6244693 + (TG)n Simple_repeat Simple_repeat 2 24 0 301 253 23 35 chr20 65909238 65909325 -6244557 - MER34 LTR ERV1 0 542 457 406 227 96 35 chr20 65909736 65909968 -6243914 - MER34 LTR ERV1 -375 269 1 237 293 12 37 chr20 65910175 65910257 -6243625 + MIR SINE MIR 183 262 0 2415 70 0 3 chr20 65910299 65910598 -6243284 + AluSx SINE Alu 1 298 -14 344 289 199 30 chr20 65911253 65911454 -6242428 - MIR SINE MIR 0 262 28 180 324 248 7 chr20 65911907 65912052 -6241830 + L2 LINE L2 2904 3083 -230 267 258 0 0 chr20 65912297 65912359 -6241523 + L1ME4a LINE L1 5601 5662 -459 311 234 81 9 chr20 65912586 65912697 -6241185 + L1ME4a LINE L1 5985 6103 -18 1803 172 0 7 chr20 65914282 65914573 -6239309 + AluJb SINE Alu 1 289 -23 201 324 27 0 chr20 65915471 65915545 -6238337 - MIR SINE MIR -117 145 70 2362 80 0 0 chr20 65916754 65917040 -6236842 + AluSg SINE Alu 1 286 -24 448 320 118 17 chr20 65917208 65917716 -6236166 + L1MB7 LINE L1 5255 5822 -299 478 217 154 23 chr20 65917763 65917938 -6235944 - MIR SINE MIR -62 200 3 2348 115 0 0 chr20 65918020 65918325 -6235557 + AluSx SINE Alu 1 305 -7 363 249 94 82 chr20 65918504 65918650 -6235232 + L1ME4a LINE L1 5603 5755 -366 2340 99 0 0 chr20 65918650 65918944 -6234938 + AluSc SINE Alu 1 294 -15 363 249 94 82 chr20 65918944 65919030 -6234852 + L1ME4a LINE L1 5755 5838 -283 688 134 0 0 chr20 65919212 65919309 -6234573 - AluJ/FLAM SINE Alu -213 99 3 2254 78 0 75 chr20 65920626 65920960 -6232922 - AluY SINE Alu -2 309 1 2284 66 3 11 chr20 65921184 65921504 -6232378 - AluSp SINE Alu 0 318 1 250 203 27 0 chr20 65922088 65922162 -6231720 + (TTTG)n Simple_repeat Simple_repeat 3 78 0 2230 105 0 3 chr20 65922540 65922834 -6231048 - AluSg SINE Alu -17 293 1 251 253 93 0 chr20 65922944 65923019 -6230863 + MIR SINE MIR 55 136 -72 718 297 108 60 chr20 65923351 65923869 -6230013 + L1MEd LINE L1 274 816 -5303 1846 150 3 7 chr20 65923908 65924201 -6229681 + AluSx SINE Alu 1 292 -20 2407 82 0 7 chr20 65924230 65924533 -6229349 + AluSp SINE Alu 1 301 -12 1779 146 59 3 chr20 65925040 65925328 -6228554 - AluSx SINE Alu -8 304 1 211 264 35 81 chr20 65926167 65926254 -6227628 + MIR SINE MIR 32 114 -94 648 154 150 82 chr20 65926281 65926453 -6227429 + L1MB7 LINE L1 5934 6132 -38 2251 110 0 3 chr20 65926453 65926753 -6227129 + AluSc SINE Alu 1 299 -10 648 154 150 82 chr20 65926753 65926791 -6227091 + L1MB7 LINE L1 6132 6166 -4 33 25 0 0 chr20 65926791 65926831 -6227051 + AT_rich Low_complexity Low_complexity 1 40 0 28 0 0 0 chr20 65927119 65927147 -6226735 + AT_rich Low_complexity Low_complexity 1 28 0 2365 98 0 0 chr20 65927260 65927557 -6226325 + AluSx SINE Alu 1 297 -15 752 176 15 0 chr20 65929052 65929183 -6224699 + FLAM_A SINE Alu 1 133 0 2252 123 0 0 chr20 65929394 65929695 -6224187 + AluSx SINE Alu 9 309 -3 381 283 19 0 chr20 65929955 65930061 -6223821 - L1MC4 LINE L1 -138 7904 7797 591 222 17 8 chr20 65930451 65930568 -6223314 - FLAM_A SINE Alu -12 121 4 1362 117 30 10 chr20 65930664 65930861 -6223021 + AluSx SINE Alu 1 201 -111 728 241 79 21 chr20 65930875 65931116 -6222766 - MIR SINE MIR 0 262 8 435 179 77 0 chr20 65931129 65931207 -6222675 - MER58 DNA MER1_type 0 2420 132 369 270 90 84 chr20 65931646 65931979 -6221903 + Tigger8 DNA MER2_type 4 338 -328 2315 104 0 0 chr20 65932056 65932345 -6221537 - AluSx SINE Alu -23 289 1 276 30 0 0 chr20 65932524 65932557 -6221325 + (TG)n Simple_repeat Simple_repeat 1 33 0 490 277 83 32 chr20 65933388 65933666 -6220216 + L2 LINE L2 3022 3313 0 731 328 48 17 chr20 65934176 65934568 -6219314 - L2 LINE L2 -296 3017 2622 256 241 69 0 chr20 65934794 65934852 -6219030 - L2 LINE L2 -1 3312 3251 1719 143 4 15 chr20 65935461 65935726 -6218156 - AluSx SINE Alu -50 262 1 2384 95 0 3 chr20 65935756 65936062 -6217820 + AluSp SINE Alu 1 305 -8 1968 138 0 20 chr20 65936392 65936690 -6217192 - AluJo SINE Alu -20 292 1 1991 148 7 3 chr20 65937410 65937715 -6216167 + AluJo SINE Alu 1 306 -6 185 192 0 19 chr20 65937825 65937877 -6216005 + GA-rich Low_complexity Low_complexity 2 52 0 261 292 11 11 chr20 65937974 65938063 -6215819 - MIR3 SINE MIR -25 183 95 200 296 99 0 chr20 65938378 65938449 -6215433 + L2 LINE L2 3235 3312 -1 2200 110 0 0 chr20 65939536 65939840 -6214042 - AluSx SINE Alu 0 304 1 2481 88 0 0 chr20 65940454 65940759 -6213123 + AluSx SINE Alu 1 305 -7 259 271 25 57 chr20 65941908 65942030 -6211852 - L1MC/D LINE L1 -1910 5898 5781 571 289 18 16 chr20 65942127 65942362 -6211520 + MIR SINE MIR 4 234 -28 203 143 71 0 chr20 65942391 65942433 -6211449 - L2 LINE L2 -56 3216 3172 236 98 0 24 chr20 65942527 65942568 -6211314 + (TTC)n Simple_repeat Simple_repeat 2 41 0 1892 144 0 11 chr20 65942590 65942874 -6211008 - AluJb SINE Alu -31 281 1 1254 143 0 0 chr20 65943010 65943185 -6210697 + FAM SINE Alu 1 175 0 488 279 107 10 chr20 65944215 65944412 -6209470 - LTR16B LTR ERVL -75 389 174 311 242 0 0 chr20 65944578 65944644 -6209238 + Charlie8 DNA MER1_type 2344 2409 -8 283 254 36 45 chr20 65944780 65944890 -6208992 + MIR SINE MIR 37 145 -117 219 231 0 0 chr20 65945601 65945653 -6208229 + (CA)n Simple_repeat Simple_repeat 2 53 0 271 228 111 67 chr20 65945951 65946087 -6207795 + L2 LINE L2 3158 3297 -16 189 0 0 0 chr20 65946089 65946110 -6207772 + (TGAA)n Simple_repeat Simple_repeat 1 21 0 646 297 118 7 chr20 65946715 65947106 -6206776 - L2 LINE L2 -248 3065 2626 477 215 134 13 chr20 65947111 65947260 -6206622 + MIR SINE MIR 85 251 -11 598 193 7 41 chr20 65947931 65948076 -6205806 - LTR37B LTR ERV1 -1 467 328 371 234 78 23 chr20 65948104 65948232 -6205650 - LTR37B LTR ERV1 -122 346 212 1908 138 3 3 chr20 65948351 65948663 -6205219 - AluJb SINE Alu 0 312 1 394 347 65 45 chr20 65949018 65949539 -6204343 - L2 LINE L2 0 3272 2705 188 300 40 0 chr20 65949562 65949612 -6204270 + L2 LINE L2 3261 3312 -1 996 294 60 42 chr20 65950064 65950426 -6203456 + L1ME4a LINE L1 5475 5855 -266 1853 118 3 35 chr20 65950426 65950739 -6203143 - AluSg SINE Alu 0 304 1 996 294 60 42 chr20 65950739 65951010 -6202872 + L1ME4a LINE L1 5855 6120 -1 417 154 147 38 chr20 65951366 65951499 -6202383 + HAL1b LINE L1 1247 1348 0 273 237 226 11 chr20 65951628 65951721 -6202161 + MIR3 SINE MIR 9 121 -87 2110 119 0 3 chr20 65951736 65952047 -6201835 - AluSx SINE Alu -2 310 1 341 349 34 20 chr20 65952054 65952203 -6201679 - L2 LINE L2 0 3272 3122 323 192 128 26 chr20 65952295 65952373 -6201509 + L1MC4 LINE L1 6618 6703 -1339 247 217 12 36 chr20 65952373 65952456 -6201426 + (TA)n Simple_repeat Simple_repeat 1 81 0 701 205 0 0 chr20 65952456 65952583 -6201299 - MIR SINE MIR -58 204 78 1356 138 13 0 chr20 65952672 65952897 -6200985 + AluJb SINE Alu 70 297 -15 263 314 68 0 chr20 65952944 65953062 -6200820 - L2 LINE L2 -260 3053 2928 1587 161 17 23 chr20 65953999 65954298 -6199584 + AluJo SINE Alu 1 297 -15 276 327 0 28 chr20 65954401 65954508 -6199374 + L1MC/D LINE L1 5722 5825 -1983 2036 115 10 3 chr20 65954572 65954877 -6199005 + AluSq SINE Alu 1 307 -6 355 316 31 0 chr20 65955006 65955104 -6198778 + L2 LINE L2 3213 3313 0 949 158 0 0 chr20 65955170 65955328 -6198554 - FRAM SINE Alu -18 158 1 1697 148 0 35 chr20 65955384 65955695 -6198187 + AluJo SINE Alu 1 300 -12 229 317 0 0 chr20 65956533 65956593 -6197289 + L2 LINE L2 3212 3271 -1 24 54 0 27 chr20 65956960 65956984 -6196898 + AT_rich Low_complexity Low_complexity 1 24 -48 2201 85 0 16 chr20 65956984 65957289 -6196593 - AluSx SINE Alu -12 300 1 24 54 0 27 chr20 65957289 65957318 -6196564 + AT_rich Low_complexity Low_complexity 24 54 -18 2162 107 0 0 chr20 65957318 65957608 -6196274 + AluSq SINE Alu 1 290 -23 24 54 0 27 chr20 65957608 65957627 -6196255 + AT_rich Low_complexity Low_complexity 54 72 0 240 309 31 0 chr20 65957729 65957826 -6196056 + MIR3 SINE MIR 82 181 -27 326 231 40 54 chr20 65958245 65958377 -6195505 - MIR3 SINE MIR -7 201 72 306 206 84 9 chr20 65958500 65958607 -6195275 - L1ME3A LINE L1 -88 6082 5968 1985 88 49 3 chr20 65959195 65959479 -6194403 + AluSx SINE Alu 1 297 -15 196 279 0 0 chr20 65959481 65959524 -6194358 - L2 LINE L2 -535 2779 2737 2243 212 120 3 chr20 65959529 65960119 -6193763 - LTR65 LTR ERV1 -3 666 8 262 314 15 45 chr20 65960517 65960669 -6193213 - MER5B DNA MER1_type -44 134 1 2142 99 3 0 chr20 65960824 65961118 -6192764 + AluSp SINE Alu 1 295 -18 209 254 0 18 chr20 65961203 65961258 -6192624 + C-rich Low_complexity Low_complexity 6 59 0 322 242 83 23 chr20 65961519 65961651 -6192231 + MER5A DNA MER1_type 18 157 -32 220 260 82 55 chr20 65961532 65961678 -6192204 - MER5B DNA MER1_type -23 155 6 * 861 146 0 0 chr20 65962249 65962386 -6191496 - FLAM_C SINE Alu -6 137 1 635 231 47 6 chr20 65962680 65962849 -6191033 - MER5B DNA MER1_type 0 178 3 1994 132 0 19 chr20 65962921 65963239 -6190643 + AluSx SINE Alu 1 312 0 2405 57 0 0 chr20 65963856 65964154 -6189728 + AluY SINE Alu 1 298 -13 851 183 99 44 chr20 65964154 65964397 -6189485 + MER96B DNA MER1_type? 158 417 0 244 139 47 0 chr20 65964803 65964846 -6189036 - L2 LINE L2 -561 2753 2709 6346 41 0 3 chr20 65964858 65965611 -6188271 + L1PA5 LINE L1 5396 6146 -8 23 0 0 0 chr20 65965638 65965661 -6188221 + AT_rich Low_complexity Low_complexity 1 23 0 198 0 0 0 chr20 65965661 65965683 -6188199 + (TAAAA)n Simple_repeat Simple_repeat 4 25 0 188 259 0 37 chr20 65965696 65965750 -6188132 + L2 LINE L2 3258 3309 -4 185 286 16 48 chr20 65965793 65965856 -6188026 + L2 LINE L2 3212 3272 0 2115 89 27 0 chr20 65966027 65966319 -6187563 - AluSp SINE Alu -13 300 1 1298 165 0 0 chr20 65966747 65966959 -6186923 + AluSq SINE Alu 1 212 -101 377 103 17 0 chr20 65966959 65967017 -6186865 + AluSg/x SINE Alu 76 134 -166 215 241 19 0 chr20 65967192 65967246 -6186636 + MIR SINE MIR 174 228 -34 23 33 0 0 chr20 65969399 65969429 -6184453 + AT_rich Low_complexity Low_complexity 1 30 0 1284 183 65 14 chr20 65969602 65969892 -6183990 + AluJo SINE Alu 1 305 -7 2128 114 0 0 chr20 65969905 65970203 -6183679 + AluSx SINE Alu 12 309 -3 466 224 50 48 chr20 65971022 65971372 -6182510 - MER113 DNA MER1_type? -109 412 5 232 284 15 15 chr20 65971434 65971501 -6182381 - MIR SINE MIR -115 93 27 806 201 10 62 chr20 65971581 65971643 -6182239 - MER5A DNA MER1_type -1 188 124 2324 93 0 3 chr20 65971643 65971956 -6181926 + AluSq SINE Alu 1 312 -1 806 201 10 62 chr20 65971956 65972087 -6181795 - MER5A DNA MER1_type -65 124 5 285 261 23 11 chr20 65972172 65972260 -6181622 - MER20B DNA MER1_type -650 133 45 1969 131 0 3 chr20 65972373 65972670 -6181212 - AluSx SINE Alu -16 296 1 1750 159 3 26 chr20 65972673 65972981 -6180901 - AluJb SINE Alu -11 301 1 27 0 0 65 chr20 65973513 65973559 -6180323 + AT_rich Low_complexity Low_complexity 1 43 0 2019 141 3 3 chr20 65973727 65974032 -6179850 + AluSq SINE Alu 1 305 -8 26 74 0 0 chr20 65974103 65974157 -6179725 + AT_rich Low_complexity Low_complexity 1 54 0 1255 102 0 6 chr20 65975049 65975226 -6178656 - AluSc SINE Alu -15 294 119 993 81 7 0 chr20 65975627 65975763 -6178119 - AluSq/x SINE Alu -174 138 2 537 274 85 24 chr20 65975778 65975942 -6177940 - L2 LINE L2 0 3313 3140 588 91 0 0 chr20 65976273 65976350 -6177532 - MADE1 DNA Mariner -3 77 1 548 265 32 32 chr20 65976987 65977172 -6176710 - MLT1K LTR MaLR 0 588 404 1195 240 39 41 chr20 65977403 65977508 -6176374 - LTR40a LTR ERVL -2 517 413 3257 181 7 4 chr20 65977508 65978066 -6175816 - MER68 LTR ERV1 0 562 3 1195 240 39 41 chr20 65978066 65978298 -6175584 - LTR40a LTR ERVL -106 413 181 300 163 61 10 chr20 65978299 65978397 -6175485 + (TA)n Simple_repeat Simple_repeat 2 104 0 844 188 0 13 chr20 65978400 65978554 -6175328 - FRAM SINE Alu -32 144 1 889 164 5 44 chr20 65978556 65978739 -6175143 - LTR40a LTR ERVL -284 235 3 1590 192 0 19 chr20 65978789 65979097 -6174785 + AluJo SINE Alu 1 302 -10 400 267 44 15 chr20 65979870 65980005 -6173877 - L2 LINE L2 -1 3312 3174 579 196 7 20 chr20 65980012 65980160 -6173722 - MER96B DNA MER1_type? -18 399 254 487 312 139 7 chr20 65980165 65980522 -6173360 - L2 LINE L2 -158 3155 2764 2110 135 116 0 chr20 65980668 65981023 -6172859 - MSTD LTR MaLR 0 396 1 1057 53 0 0 chr20 65981146 65981277 -6172605 + AluSg SINE Alu 1 131 -179 2017 133 0 3 chr20 65981282 65981591 -6172291 + AluSg SINE Alu 3 310 0 219 368 9 18 chr20 65981965 65982079 -6171803 + MIR SINE MIR 145 257 -5 320 371 51 11 chr20 65982305 65982480 -6171402 + MIR SINE MIR 67 248 -14 364 273 61 0 chr20 65982619 65982718 -6171164 + MIR SINE MIR 59 163 -99 334 269 34 42 chr20 65982813 65982865 -6171017 - L2 LINE L2 -38 3275 3224 2068 110 0 3 chr20 65982865 65983166 -6170716 + AluSx SINE Alu 1 300 -12 334 269 34 42 chr20 65983166 65983232 -6170650 - L2 LINE L2 -89 3224 3158 243 0 0 0 chr20 65983472 65983499 -6170383 + (CATA)n Simple_repeat Simple_repeat 2 28 0 1436 163 4 19 chr20 65983504 65983768 -6170114 - AluJo SINE Alu -32 280 21 21 0 0 0 chr20 65983776 65983797 -6170085 + AT_rich Low_complexity Low_complexity 1 21 0 209 148 0 37 chr20 65984520 65984574 -6169308 + (CCCCG)n Simple_repeat Simple_repeat 5 56 0 595 220 121 11 chr20 65984924 65985106 -6168776 - MIR SINE MIR -11 251 50 280 305 236 25 chr20 65985169 65985372 -6168510 + L2 LINE L2 3027 3272 0 348 321 82 19 chr20 65985390 65985549 -6168333 - MIR SINE MIR -81 181 13 512 285 298 11 chr20 65985624 65986127 -6167755 + L2 LINE L2 2661 3313 0 443 243 75 0 chr20 65986390 65986497 -6167385 - L2 LINE L2 -4 3309 3195 2592 233 122 31 chr20 65986505 65987278 -6166604 + MER21B LTR ERV1 5 847 -16 2253 64 0 0 chr20 65987282 65987588 -6166294 + AluY SINE Alu 1 306 0 615 164 117 0 chr20 65987779 65987907 -6165975 + MIR SINE MIR 102 244 -18 1556 159 23 10 chr20 65987938 65988239 -6165643 + AluJo SINE Alu 1 305 -7 1529 193 30 0 chr20 65988853 65989153 -6164729 + AluJb SINE Alu 1 309 -3 1441 161 15 30 chr20 65989597 65989864 -6164018 + AluJb SINE Alu 1 263 -49 487 229 32 128 chr20 65989872 65990121 -6163761 - Charlie8 DNA MER1_type -1008 1409 98 2148 114 0 0 chr20 65990194 65990492 -6163390 + AluSq SINE Alu 1 298 -15 223 316 76 13 chr20 65991324 65991403 -6162479 - MIR SINE MIR -102 106 23 421 257 10 0 chr20 65991638 65991739 -6162143 + U13 snRNA snRNA 1 102 -2 21 0 0 0 chr20 65992234 65992255 -6161627 + AT_rich Low_complexity Low_complexity 1 21 0 2417 74 3 0 chr20 65992483 65992794 -6161088 - AluSp SINE Alu -1 312 1 21 36 0 0 chr20 65993505 65993533 -6160349 + AT_rich Low_complexity Low_complexity 1 28 0 1131 178 182 23 chr20 65993539 65993797 -6160085 - AluJo SINE Alu 0 302 4 14845 128 23 25 chr20 65994085 65994209 -6159673 - Tigger1 DNA MER2_type 0 2418 2295 1658 139 24 35 chr20 65994209 65994497 -6159385 + AluJo SINE Alu 8 292 -20 14845 128 23 25 chr20 65994497 65995209 -6158673 - Tigger1 DNA MER2_type -123 2295 1583 2091 122 3 0 chr20 65995209 65995520 -6158362 - AluSx SINE Alu 0 312 1 14845 128 23 25 chr20 65995520 65997082 -6156800 - Tigger1 DNA MER2_type -835 1583 24 180 111 0 0 chr20 65997575 65997602 -6156280 + (TG)n Simple_repeat Simple_repeat 2 28 0 201 195 0 0 chr20 65997605 65997646 -6156236 + (CATATA)n Simple_repeat Simple_repeat 1 41 0 1416 143 136 4 chr20 65997654 65997912 -6155970 - L1MB5 LINE L1 -9 6165 5874 2140 144 28 0 chr20 65998170 65998496 -6155386 + MER2 DNA MER2_type 3 337 -8 463 308 146 16 chr20 65999061 65999333 -6154549 - L1MB5 LINE L1 -2018 5790 5555 1265 185 86 58 chr20 65999333 65999625 -6154257 - AluJo SINE Alu -2 300 1 463 308 146 16 chr20 65999625 65999777 -6154105 - L1MB5 LINE L1 -2253 5555 5311 301 308 98 30 chr20 66000567 66000700 -6153182 + L2 LINE L2 3117 3258 -14 606 317 121 27 chr20 66000963 66001514 -6152368 - L2 LINE L2 -20 3293 2698 182 275 0 0 chr20 66001797 66001837 -6152045 - L2 LINE L2 -87 3185 3146 669 230 145 36 chr20 66002136 66002362 -6151520 - MER113 DNA MER1_type? -124 397 127 2104 110 0 0 chr20 66002362 66002674 -6151208 + AluSx SINE Alu 1 312 0 669 230 145 36 chr20 66002674 66002750 -6151132 - MER113 DNA MER1_type? -394 127 61 1591 174 45 63 chr20 66003645 66004042 -6149840 - MLT1B LTR MaLR 0 390 1 2163 113 0 0 chr20 66004074 66004367 -6149515 + AluSx SINE Alu 1 293 -19 222 235 0 37 chr20 66004857 66004938 -6148944 + (CCTG)n Simple_repeat Simple_repeat 2 79 0 2013 110 0 33 chr20 66005059 66005359 -6148523 - AluSg SINE Alu -20 290 1 300 298 32 0 chr20 66005502 66005596 -6148286 + MIR SINE MIR 44 140 -122 255 226 19 0 chr20 66006461 66006472 -6147410 + MER3 DNA MER1_type 37 48 -161 683 205 29 73 chr20 66006472 66006528 -6147354 - MER3 DNA MER1_type 0 209 152 2215 89 0 7 chr20 66006528 66006832 -6147050 + AluSp SINE Alu 1 302 -11 683 205 29 73 chr20 66006832 66006980 -6146902 - MER3 DNA MER1_type -57 152 14 1166 133 0 0 chr20 66008206 66008372 -6145510 - AluJb SINE Alu -145 167 2 890 114 0 23 chr20 66008433 66008564 -6145318 + FLAM_C SINE Alu 1 128 -5 338 265 0 24 chr20 66008679 66008762 -6145120 - MIR SINE MIR -74 188 108 2117 101 0 0 chr20 66008891 66009179 -6144703 + AluSc SINE Alu 1 288 -21 1783 162 7 3 chr20 66009371 66009668 -6144214 + AluJo SINE Alu 1 298 -14 417 258 61 8 chr20 66009951 66010083 -6143799 + MIR SINE MIR 52 190 -72 298 202 71 12 chr20 66010954 66011038 -6142844 + L1ME3A LINE L1 6077 6165 -5 259 267 33 0 chr20 66011950 66012010 -6141872 + L2 LINE L2 3210 3271 -1 2028 99 0 0 chr20 66012261 66012545 -6141337 + AluSx SINE Alu 1 284 -28 249 83 0 0 chr20 66012545 66012581 -6141301 + (CAAT)n Simple_repeat Simple_repeat 2 37 0 406 303 41 14 chr20 66013737 66013882 -6140000 - L1ME1 LINE L1 -76 6090 5942 935 173 112 9 chr20 66013887 66014101 -6139781 - L1ME LINE L1 -564 5602 5367 409 179 5 4 chr20 66014284 66014504 -6139378 + AluJo SINE Alu 1 298 -14 2108 74 56 7 chr20 66015190 66015475 -6138407 - AluSg SINE Alu -10 300 2 2073 110 3 19 chr20 66015716 66016033 -6137849 - AluSx SINE Alu 0 312 1 2125 113 7 0 chr20 66016039 66016349 -6137533 - AluSq SINE Alu -1 312 1 851 174 116 6 chr20 66016786 66016958 -6136924 - AluJb SINE Alu -22 290 100 358 182 0 0 chr20 66016992 66017058 -6136824 - L1MA5A LINE L1 -10 6287 6222 990 143 0 91 chr20 66017651 66017882 -6136000 + AluJb SINE Alu 87 296 -16 227 354 71 9 chr20 66018827 66019039 -6134843 + MIR SINE MIR 18 242 -20 1771 145 3 21 chr20 66019676 66019959 -6133923 + AluSx SINE Alu 1 278 -34 234 150 0 0 chr20 66019959 66019999 -6133883 + (CA)n Simple_repeat Simple_repeat 2 41 0 1717 167 3 7 chr20 66021201 66021513 -6132369 + AluJo SINE Alu 2 312 0 295 264 116 8 chr20 66022135 66022256 -6131626 - L2 LINE L2 0 3313 3180 300 240 169 78 chr20 66022597 66022701 -6131181 - L1ME1 LINE L1 -216 5905 5781 2369 61 0 0 chr20 66022701 66022995 -6130887 - AluY SINE Alu -17 294 1 300 240 169 78 chr20 66022995 66023044 -6130838 - L1ME1 LINE L1 -340 5781 5738 408 314 30 38 chr20 66023335 66023571 -6130311 - Charlie8 DNA MER1_type -2152 265 32 3749 190 89 25 chr20 66024628 66025331 -6128551 + L1MB7 LINE L1 4751 5408 -776 2042 104 24 3 chr20 66025331 66025629 -6128253 + AluSx SINE Alu 1 304 -8 3749 190 89 25 chr20 66025629 66026261 -6127621 + L1MB7 LINE L1 5408 6184 0 1919 124 0 42 chr20 66026653 66026959 -6126923 + AluJb SINE Alu 1 293 -19 39 50 0 0 chr20 66027105 66027165 -6126717 + AT_rich Low_complexity Low_complexity 1 60 0 1839 140 81 0 chr20 66027178 66027486 -6126396 + MER1B DNA MER1_type 5 337 0 1012 179 36 0 chr20 66027581 66027776 -6126106 - MER20 DNA MER1_type 0 219 18 2062 98 0 46 chr20 66027836 66028142 -6125740 - AluSx SINE Alu -20 292 1 407 301 0 23 chr20 66028147 66028280 -6125602 - MIR SINE MIR -60 148 19 275 189 14 68 chr20 66028308 66028382 -6125500 - L2 LINE L2 -25 3288 3219 1754 231 67 35 chr20 66028608 66029149 -6124733 - MER68 LTR ERV1 0 562 5 1013 99 59 0 chr20 66030894 66031046 -6122836 + AluSc SINE Alu 133 293 -16 2014 117 0 0 chr20 66031285 66031567 -6122315 + AluSx SINE Alu 1 282 -30 228 35 0 0 chr20 66031567 66031596 -6122286 + (GA)n Simple_repeat Simple_repeat 2 30 0 420 140 0 0 chr20 66031596 66031689 -6122193 + (CA)n Simple_repeat Simple_repeat 1 93 0 1964 134 0 10 chr20 66035552 66035851 -6118031 - AluJb SINE Alu -5 307 12 180 178 41 123 chr20 66036354 66036427 -6117455 - MIR SINE MIR -61 147 81 4771 148 32 28 chr20 66036674 66037650 -6116232 - MER11C LTR ERVK 0 1071 1 1117 204 108 22 chr20 66037992 66038261 -6115621 + AluJo SINE Alu 1 292 -10 1938 122 10 10 chr20 66038660 66038963 -6114919 - AluSx SINE Alu -9 303 1 1945 132 14 0 chr20 66039464 66039759 -6114123 - AluSx SINE Alu -13 299 1 485 244 139 34 chr20 66039829 66040038 -6113844 - Charlie8 DNA MER1_type -2152 265 35 2013 108 24 0 chr20 66040043 66040339 -6113543 + AluSp SINE Alu 1 303 -10 546 198 9 36 chr20 66041630 66041741 -6112141 - MER58B DNA MER1_type 0 341 234 803 101 42 0 chr20 66042656 66042775 -6111107 + AluSg/x SINE Alu 175 298 -12 752 162 0 0 chr20 66042781 66042898 -6110984 + FLAM_C SINE Alu 2 118 -25 1192 219 128 8 chr20 66043070 66043430 -6110452 - L1MC4a LINE L1 -698 7110 6708 388 263 35 0 chr20 66043447 66043561 -6110321 - MLT1E2 LTR MaLR -489 137 20 2175 118 0 0 chr20 66043820 66044126 -6109756 + AluSx SINE Alu 1 306 -6 810 223 0 0 chr20 66044129 66044295 -6109587 + AluJb SINE Alu 134 299 -13 1506 186 7 33 chr20 66044306 66044607 -6109275 + AluJb SINE Alu 1 293 -19 1001 184 102 98 chr20 66044607 66044922 -6108960 + MER21A LTR ERV1 88 403 -528 2049 130 3 0 chr20 66044922 66045221 -6108661 + AluSx SINE Alu 1 300 -12 2142 114 7 0 chr20 66045230 66045538 -6108344 + AluSx SINE Alu 1 310 -2 2061 112 14 0 chr20 66045542 66045855 -6108027 + AluSx SINE Alu 1 317 0 1043 165 0 0 chr20 66045856 66046038 -6107844 + AluSg/x SINE Alu 123 304 -8 666 167 0 0 chr20 66046039 66046171 -6107711 + (CCCA)n Simple_repeat Simple_repeat 2 133 0 209 282 47 47 chr20 66046173 66046258 -6107624 - L2 LINE L2 0 3272 3188 1747 139 10 46 chr20 66046501 66046804 -6107078 - AluSx SINE Alu -20 292 1 2325 95 0 6 chr20 66047281 66047596 -6106286 - AluSp SINE Alu 0 313 1 1843 153 0 10 chr20 66047626 66047921 -6105961 - AluSx SINE Alu -17 295 4 2134 132 0 0 chr20 66047960 66048270 -6105612 - AluSx SINE Alu -2 310 1 2386 88 0 0 chr20 66048470 66048777 -6105105 - AluSc SINE Alu -2 307 1 329 205 79 79 chr20 66048781 66048908 -6104974 - Charlie8 DNA MER1_type -2265 152 26 1904 128 17 0 chr20 66049870 66050158 -6103724 + AluSx SINE Alu 1 293 -19 2173 88 0 39 chr20 66050328 66050464 -6103418 + AluSx SINE Alu 1 141 -171 2274 82 3 0 chr20 66050464 66050767 -6103115 + AluSg SINE Alu 1 304 -6 2229 75 17 0 chr20 66050767 66051060 -6102822 + AluSp SINE Alu 1 298 -15 2173 88 0 39 chr20 66050768 66051231 -6102651 + AluSx SINE Alu 141 296 -16 794 159 62 80 chr20 66051231 66051305 -6102577 + AluSg/x SINE Alu 134 208 -104 2207 88 3 0 chr20 66051305 66051600 -6102282 + AluSx SINE Alu 1 296 -16 794 159 62 80 chr20 66051600 66051701 -6102181 + AluSg/x SINE Alu 208 306 -6 1184 192 42 0 chr20 66051841 66052055 -6101827 - MER58A DNA MER1_type -1 223 1 829 131 0 83 chr20 66053023 66053168 -6100714 + FLAM_C SINE Alu 1 133 0 2066 104 4 0 chr20 66053380 66053683 -6100199 + AluSc SINE Alu 1 304 0 702 179 0 0 chr20 66054261 66054378 -6099504 + FLAM_A SINE Alu 1 117 -16 200 172 17 0 chr20 66054378 66054436 -6099446 + (TA)n Simple_repeat Simple_repeat 2 60 0 557 200 52 0 chr20 66054436 66054551 -6099331 + MER58B DNA MER1_type 124 244 -97 479 197 63 39 chr20 66054554 66054681 -6099201 + MER58B DNA MER1_type 211 340 -1 1824 119 8 0 chr20 66054714 66054982 -6098900 + AluSq SINE Alu 1 270 -43 1012 88 0 0 chr20 66054993 66055130 -6098752 - AluSq/x SINE Alu -176 137 1 914 158 71 27 chr20 66055130 66055312 -6098570 - AluJb SINE Alu -122 190 1 823 184 0 0 chr20 66055698 66055839 -6098043 + AluJb SINE Alu 2 142 -170 210 162 0 0 chr20 66055867 66055904 -6097978 + A-rich Low_complexity Low_complexity 1 37 0 1067 140 26 21 chr20 66055908 66056081 -6097801 + AluJb SINE Alu 118 294 -18 2049 123 3 19 chr20 66056081 66056398 -6097484 + AluSx SINE Alu 1 312 0 1067 140 26 21 chr20 66056398 66056417 -6097465 + AluJb SINE Alu 294 311 -1 230 233 0 0 chr20 66056495 66056538 -6097344 - MLT1E LTR MaLR -207 447 405 245 255 90 90 chr20 66056538 66056683 -6097199 - MLT1E LTR MaLR -353 240 96 330 207 26 112 chr20 66056838 66056897 -6096985 + MLT1E3 LTR MaLR 2 48 -606 2178 91 7 3 chr20 66056897 66057205 -6096677 - AluSp SINE Alu -4 309 1 330 207 26 112 chr20 66057205 66057261 -6096621 + MLT1E3 LTR MaLR 48 107 -547 1160 242 43 15 chr20 66057294 66057662 -6096220 + MLT1E3 LTR MaLR 202 617 -7 539 244 52 0 chr20 66057914 66058049 -6095833 - L1MD2 LINE L1 -13 6346 6205 265 276 26 0 chr20 66058059 66058135 -6095747 - L1MD2 LINE L1 -213 6146 6069 1854 128 21 0 chr20 66058136 66058417 -6095465 + AluJb SINE Alu 1 287 -25 1489 234 94 5 chr20 66058493 66058877 -6095005 - L1MD2 LINE L1 -337 6022 5605 2348 116 8 44 chr20 66058918 66059307 -6094575 + THE1C LTR MaLR 1 375 0 414 254 55 60 chr20 66059557 66059774 -6094108 + L2 LINE L2 2910 3125 -188 1389 25 0 0 chr20 66059776 66059938 -6093944 - L1PA2 LINE L1 0 6155 5994 2091 185 68 70 chr20 66060040 66060522 -6093360 + MER21B LTR ERV1 1 481 -382 1094 46 0 0 chr20 66060532 66060662 -6093220 + AluSc SINE Alu 1 130 -179 1955 91 0 0 chr20 66060662 66060942 -6092940 + AluY SINE Alu 27 306 0 1323 205 85 47 chr20 66060947 66061288 -6092594 + MER21B LTR ERV1 499 852 -11 2255 99 0 0 chr20 66061294 66061596 -6092286 - AluSx SINE Alu -10 302 1 354 301 0 12 chr20 66061612 66061695 -6092187 + L2 LINE L2 3176 3257 -15 2045 125 3 0 chr20 66061704 66062015 -6091867 - AluSx SINE Alu 0 312 1 2523 32 0 16 chr20 66062038 66062347 -6091535 + AluY SINE Alu 2 305 -6 790 248 153 25 chr20 66062351 66062625 -6091257 - L1MD3 LINE L1 -32 7963 7655 2103 129 43 39 chr20 66062641 66062713 -6091169 - Tigger2a DNA MER2_type -2274 444 374 1845 149 7 3 chr20 66062713 66063015 -6090867 - AluSx SINE Alu -9 303 1 2103 129 43 39 chr20 66063015 66063033 -6090849 - Tigger2a DNA MER2_type -2344 374 358 1743 181 0 7 chr20 66063033 66063331 -6090551 - AluJo SINE Alu -16 296 1 2103 129 43 39 chr20 66063331 66063699 -6090183 - Tigger2a DNA MER2_type -2360 358 1 2775 241 43 59 chr20 66063718 66064753 -6089129 - L1MC4a LINE L1 -342 7466 6448 3119 86 10 0 chr20 66064753 66065158 -6088724 + MSTA LTR MaLR 1 409 -19 561 209 70 84 chr20 66065168 66065319 -6088563 - L1MC4a LINE L1 -1357 6451 6302 2048 111 3 7 chr20 66065319 66065616 -6088266 + AluSx SINE Alu 1 296 -16 561 209 70 84 chr20 66065616 66065679 -6088203 - L1MC4a LINE L1 -1506 6302 6240 1046 168 0 35 chr20 66065689 66065892 -6087990 - AluJb SINE Alu -14 298 103 349 136 51 0 chr20 66065893 66065952 -6087930 - L1MC4a LINE L1 -1561 6247 6186 2162 116 0 0 chr20 66065981 66066284 -6087598 + AluSx SINE Alu 1 303 -9 1277 287 10 13 chr20 66066286 66066673 -6087209 - L1MC4a LINE L1 -1893 5915 5530 1887 109 10 17 chr20 66066941 66067234 -6086648 - AluJb SINE Alu -13 299 9 331 238 79 165 chr20 66067314 66067805 -6086077 - L2 LINE L2 0 3313 2865 4593 56 4 0 chr20 66068020 66068572 -6085310 + MER41A LTR ERV1 1 554 0 2084 137 0 0 chr20 66068791 66069098 -6084784 + AluSx SINE Alu 1 307 -5 229 322 165 19 chr20 66069193 66069454 -6084428 - L2 LINE L2 0 3313 3015 250 200 60 0 chr20 66069620 66069670 -6084212 + MIR SINE MIR 209 261 -1 31 26 0 0 chr20 66069710 66069748 -6084134 + AT_rich Low_complexity Low_complexity 1 38 0 1879 153 3 0 chr20 66069810 66070110 -6083772 - AluJo SINE Alu -11 301 1 478 234 88 72 chr20 66070134 66070264 -6083618 + MER34 LTR ERV1 223 349 -193 1988 108 17 0 chr20 66070264 66070551 -6083331 + AluSx SINE Alu 1 292 -20 478 234 88 72 chr20 66070551 66070727 -6083155 + MER34 LTR ERV1 349 534 -8 311 252 87 0 chr20 66070762 66070877 -6083005 - L1ME LINE L1 -309 5812 5688 516 181 27 20 chr20 66071309 66071458 -6082424 + L1M4 LINE L1 5103 5252 -894 360 118 0 88 chr20 66071459 66071527 -6082355 - MLT1A2 LTR MaLR 0 374 313 731 232 73 40 chr20 66071529 66071610 -6082272 - MER2 DNA MER2_type 0 345 268 2109 102 10 7 chr20 66071610 66071915 -6081967 + AluSx SINE Alu 1 306 -6 731 232 73 40 chr20 66071915 66072105 -6081777 - MER2 DNA MER2_type -77 268 65 2101 127 0 0 chr20 66072106 66072413 -6081469 - AluSx SINE Alu 0 312 6 418 313 103 18 chr20 66072593 66072817 -6081065 + MIR SINE MIR 1 243 -19 1739 173 3 3 chr20 66073012 66073313 -6080569 + AluJb SINE Alu 1 301 -11 1890 140 19 7 chr20 66073470 66073778 -6080104 + AluJb SINE Alu 1 312 0 2129 83 10 0 chr20 66073793 66074082 -6079800 + AluSx SINE Alu 1 292 -20 703 204 105 0 chr20 66074102 66074254 -6079628 + L1MB7 LINE L1 5887 6054 -130 977 179 0 7 chr20 66074254 66074492 -6079390 - AluJb SINE Alu -22 290 1 2258 87 0 3 chr20 66074500 66074798 -6079084 - AluSx SINE Alu -15 297 1 26 0 0 0 chr20 66075415 66075441 -6078441 + AT_rich Low_complexity Low_complexity 1 26 0 811 202 31 123 chr20 66075558 66075627 -6078255 - MLT1C LTR MaLR -2 465 391 1645 93 137 22 chr20 66075627 66075897 -6077985 + AluSx SINE Alu 1 301 -11 811 202 31 123 chr20 66075897 66076119 -6077763 - MLT1C LTR MaLR -76 391 201 1703 163 0 7 chr20 66076123 66076423 -6077459 - AluJb SINE Alu -14 298 1 922 60 8 30 chr20 66076457 66076590 -6077292 - L1PA13 LINE L1 -11 6152 6023 1243 95 0 0 chr20 66076590 66076759 -6077123 - AluSp SINE Alu -8 305 137 2530 76 12 0 chr20 66076760 66077090 -6076792 - L1PA12 LINE L1 -132 6036 5703 773 177 51 23 chr20 66077091 66077266 -6076616 - MLT1C LTR MaLR -287 180 1 247 200 25 62 chr20 66077266 66077346 -6076536 - L1M4 LINE L1 -1516 4630 4554 2328 87 0 0 chr20 66077346 66077656 -6076226 - AluSx SINE Alu -1 311 2 391 256 43 77 chr20 66077659 66077677 -6076205 - L1M4 LINE L1 -1701 4445 4428 2149 107 7 3 chr20 66077677 66077987 -6075895 - AluSx SINE Alu -1 311 1 391 256 43 77 chr20 66077987 66078096 -6075786 - L1M4 LINE L1 -1718 4428 4317 2037 129 0 0 chr20 66078096 66078407 -6075475 - AluSx SINE Alu -1 311 1 391 256 43 77 chr20 66078407 66078540 -6075342 - L1M4 LINE L1 -1829 4317 4193 2112 101 7 0 chr20 66078695 66078993 -6074889 + AluSg SINE Alu 1 300 -10 2196 97 3 3 chr20 66079042 66079350 -6074532 - AluSp SINE Alu -5 308 1 240 218 0 18 chr20 66079532 66079587 -6074295 + (TATG)n Simple_repeat Simple_repeat 2 55 0 961 120 0 0 chr20 66079611 66079744 -6074138 - FLAM_C SINE Alu 0 133 1 1650 177 7 3 chr20 66079750 66080044 -6073838 - AluSx SINE Alu -17 295 1 2209 89 0 0 chr20 66080373 66080666 -6073216 + AluSq SINE Alu 3 295 -18 2065 106 0 3 chr20 66080818 66081125 -6072757 + AluSx SINE Alu 1 306 0 422 204 56 19 chr20 66081565 66081673 -6072209 - MER58B DNA MER1_type -6 335 224 333 194 30 0 chr20 66081702 66081769 -6072113 + MER58B DNA MER1_type 270 338 -3 623 211 16 0 chr20 66081802 66081925 -6071957 - FLAM_A SINE Alu -8 125 1 1644 70 9 0 chr20 66081938 66082151 -6071731 - AluSg/x SINE Alu -12 300 86 34 0 0 22 chr20 66083178 66083201 -6070681 + AT_rich Low_complexity Low_complexity 1 24 -20 2291 64 14 0 chr20 66083201 66083496 -6070386 - AluSp SINE Alu -14 299 1 34 0 0 22 chr20 66083496 66083517 -6070365 + AT_rich Low_complexity Low_complexity 24 44 0 1849 140 17 0 chr20 66083564 66083857 -6070025 - AluSx SINE Alu -14 298 1 1958 118 10 7 chr20 66083864 66084168 -6069714 - AluJb SINE Alu -7 305 1 364 179 0 15 chr20 66084170 66084237 -6069645 - MER2 DNA MER2_type -278 67 2 * 578 214 168 81 chr20 66084237 66084486 -6069396 - MER57B LTR ERV1 -137 266 1 724 284 62 53 chr20 66084486 66084824 -6069058 - MER57-int LTR ERV1 -393 7144 6804 2000 143 0 3 chr20 66085140 66085448 -6068434 - AluSx SINE Alu -5 307 1 2022 98 24 20 chr20 66085514 66085811 -6068071 - AluSg SINE Alu -12 298 1 2043 97 21 10 chr20 66086303 66086591 -6067291 + AluSx SINE Alu 2 292 -20 1794 138 19 39 chr20 66086739 66087050 -6066832 - AluJo SINE Alu -7 305 1 1839 144 7 10 chr20 66087180 66087478 -6066404 - AluSx SINE Alu -15 297 1 529 287 37 33 chr20 66087480 66087724 -6066158 - L1MC4a LINE L1 -1983 5825 5581 3503 213 26 12 chr20 66087887 66088728 -6065154 - L1 LINE L1 -1841 4947 4095 2051 220 62 35 chr20 66088717 66089427 -6064455 - L1 LINE L1 -2911 3877 3149 * 5587 268 108 16 chr20 66089437 66091258 -6062624 - L1 LINE L1 -4795 1994 7 453 113 0 0 chr20 66091959 66092021 -6061861 - MSTA LTR MaLR -2 426 365 2189 70 7 10 chr20 66092737 66093038 -6060844 + AluY SINE Alu 1 300 -11 334 82 0 0 chr20 66093415 66093464 -6060418 - L1PA15 LINE L1 -9 6156 6108 1413 204 103 37 chr20 66093543 66093979 -6059903 - MLT1C LTR MaLR 0 467 3 1415 236 22 17 chr20 66094038 66094399 -6059483 + MLT1A1 LTR MaLR 3 365 0 1961 148 3 0 chr20 66094861 66095172 -6058710 - AluSx SINE Alu 0 312 1 183 235 0 0 chr20 66095215 66095266 -6058616 + (CGTG)n Simple_repeat Simple_repeat 1 51 0 23 33 0 0 chr20 66095508 66095538 -6058344 + AT_rich Low_complexity Low_complexity 1 30 0 1640 197 16 30 chr20 66096049 66096414 -6057468 - MLT1A1 LTR MaLR -1 364 5 1887 155 35 32 chr20 66096437 66096811 -6057071 + THE1C LTR MaLR 1 375 0 7218 196 72 53 chr20 66096811 66098361 -6055521 + THE1C-int LTR MaLR 1 1580 0 1939 144 43 35 chr20 66098361 66098730 -6055152 + THE1C LTR MaLR 1 372 -3 360 335 87 6 chr20 66098732 66098905 -6054977 + MIR SINE MIR 76 262 0 2303 211 18 8 chr20 66099748 66100236 -6053646 - L1 LINE L1 -1069 5077 4585 1640 136 99 6 chr20 66100227 66100269 -6053613 + L1 LINE L1 4213 4250 -1896 * 318 26 0 0 chr20 66100269 66100308 -6053574 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 1640 136 99 6 chr20 66100308 66100617 -6053265 + L1 LINE L1 4250 4597 -1549 305 344 33 24 chr20 66100621 66100833 -6053049 - L1 LINE L1 -1983 4163 3950 207 210 70 20 chr20 66101153 66101253 -6052629 + (TTATA)n Simple_repeat Simple_repeat 5 109 0 623 220 23 8 chr20 66101809 66101941 -6051941 - LTR12 LTR ERV1 -222 492 359 267 222 14 0 chr20 66101941 66102013 -6051869 - LTR30 LTR ERV1 -98 624 552 1500 118 96 44 chr20 66102014 66102284 -6051598 - LTR12 LTR ERV1 -430 284 1 261 0 0 0 chr20 66103505 66103541 -6050341 + (TC)n Simple_repeat Simple_repeat 1 65 0 261 0 0 0 chr20 66103541 66103570 -6050312 + (TC)n Simple_repeat Simple_repeat 2 30 0 198 0 0 0 chr20 66103593 66103615 -6050267 + (TC)n Simple_repeat Simple_repeat 1 22 0 279 297 11 22 chr20 66104234 66104325 -6049557 - L1MC/D LINE L1 -2145 5663 5574 318 262 12 0 chr20 66104328 66104412 -6049470 + L1MC/D LINE L1 5744 5828 -1980 335 65 0 0 chr20 66104413 66104459 -6049423 - MADE1 DNA Mariner -34 46 1 209 192 231 26 chr20 66104739 66104817 -6049065 - MIR3 SINE MIR -5 203 110 2347 106 0 3 chr20 66105071 66105382 -6048500 - AluSg SINE Alu 0 310 1 2158 101 7 14 chr20 66105580 66105876 -6048006 + AluSp SINE Alu 10 303 -10 1503 105 0 0 chr20 66106169 66106359 -6047523 + AluSg SINE Alu 1 190 -120 2441 72 0 0 chr20 66106472 66106763 -6047119 - AluSq SINE Alu -22 291 1 246 288 99 0 chr20 66107187 66107298 -6046584 - L1ME4a LINE L1 -40 6081 5960 588 304 9 89 chr20 66107366 66107682 -6046200 + L2 LINE L2 2977 3267 -5 322 241 37 37 chr20 66107769 66107877 -6046005 - MIR SINE MIR -108 154 47 22 56 0 0 chr20 66108675 66108711 -6045171 + AT_rich Low_complexity Low_complexity 1 36 0 339 268 32 8 chr20 66109170 66109293 -6044589 - L2 LINE L2 0 3313 3188 5302 25 0 2 chr20 66109619 66110224 -6043658 - L1PA3 LINE L1 -5 6150 5547 4958 23 0 0 chr20 66110224 66110788 -6043094 + L1P LINE L1 3766 4329 -1817 2322 64 3 14 chr20 66110788 66111085 -6042797 - AluY SINE Alu -17 294 1 189 0 0 0 chr20 66111356 66111377 -6042505 + (GA)n Simple_repeat Simple_repeat 2 22 0 23 0 0 0 chr20 66111962 66111985 -6041897 + AT_rich Low_complexity Low_complexity 1 23 0 1937 131 25 0 chr20 66112708 66112990 -6040892 - AluSx SINE Alu -23 289 1 2000 195 43 7 chr20 66112998 66113756 -6040126 - L1 LINE L1 -3542 4023 3238 284 162 176 0 chr20 66113770 66113838 -6040044 + MLT2F LTR ERVL 581 660 -3 24 0 0 0 chr20 66113931 66113955 -6039927 + AT_rich Low_complexity Low_complexity 1 24 0 243 277 0 0 chr20 66114676 66114741 -6039141 + (TA)n Simple_repeat Simple_repeat 2 66 0 1185 241 8 0 chr20 66114741 66114977 -6038905 - MER8 DNA MER2_type 0 239 2 998 267 26 67 chr20 66114984 66115403 -6038479 + MLT1D LTR MaLR 36 437 -68 1528 116 74 0 chr20 66115596 66115812 -6038070 - AluSq SINE Alu -81 232 1 413 248 185 0 chr20 66115947 66116104 -6037778 - MIR SINE MIR -46 216 31 236 319 64 0 chr20 66116148 66116242 -6037640 + MIR SINE MIR 50 149 -113 264 233 17 0 chr20 66116522 66116582 -6037300 + CT-rich Low_complexity Low_complexity 3 63 0 422 295 136 84 chr20 66117087 66118338 -6035544 + L2 LINE L2 1525 2840 -474 322 125 0 0 chr20 66118347 66118395 -6035487 - AluS SINE Alu -226 77 30 297 167 24 12 chr20 66118417 66118501 -6035381 + CT-rich Low_complexity Low_complexity 3 87 0 2311 96 0 13 chr20 66118777 66118913 -6034969 + AluSq SINE Alu 1 137 -176 2442 84 3 0 chr20 66118913 66119211 -6034671 + AluSp SINE Alu 1 299 -14 2311 96 0 13 chr20 66119211 66119376 -6034506 + AluSq SINE Alu 137 298 -15 183 80 0 0 chr20 66119383 66119408 -6034474 + (TGAA)n Simple_repeat Simple_repeat 4 28 0 187 287 35 23 chr20 66119494 66119581 -6034301 - MIR3 SINE MIR -1 207 120 258 32 0 0 chr20 66119738 66119769 -6034113 + (TTTTA)n Simple_repeat Simple_repeat 1 31 0 2455 77 3 0 chr20 66120155 66120454 -6033428 + AluY SINE Alu 1 300 -11 2016 123 0 11 chr20 66120454 66120762 -6033120 + AluSx SINE Alu 1 305 0 721 124 91 25 chr20 66120768 66120889 -6032993 + AluJo SINE Alu 2 130 -182 238 200 0 0 chr20 66120904 66120949 -6032933 - MIR3 SINE MIR -53 155 111 2251 110 13 0 chr20 66120976 66121284 -6032598 + AluSp SINE Alu 1 312 -1 215 206 27 55 chr20 66121594 66121667 -6032215 - MIR SINE MIR -68 140 70 346 230 80 0 chr20 66121781 66121881 -6032001 - MIR SINE MIR -66 196 89 2185 110 4 0 chr20 66123078 66123388 -6030494 - AluSx SINE Alu 0 311 1 833 269 78 23 chr20 66123504 66123979 -6029903 + L1 LINE L1 2830 3312 -2834 966 201 0 0 chr20 66123994 66124163 -6029719 + AluJo SINE Alu 120 288 -24 337 287 111 58 chr20 66124165 66124437 -6029445 + L1 LINE L1 3326 3582 -2564 1468 118 113 105 chr20 66124437 66124477 -6029405 - THE1C LTR MaLR 0 375 337 2419 80 7 0 chr20 66124477 66124776 -6029106 + AluSp SINE Alu 1 301 -12 1468 118 113 105 chr20 66124776 66125107 -6028775 - THE1C LTR MaLR -38 337 1 337 287 111 58 chr20 66125107 66125119 -6028763 + L1 LINE L1 3582 3592 -2554 2072 146 0 0 chr20 66125119 66125414 -6028468 - AluSx SINE Alu -16 296 2 337 287 111 58 chr20 66125414 66125542 -6028340 + L1 LINE L1 3592 3761 -2385 716 247 69 44 chr20 66125703 66125744 -6028138 + L1MC4a LINE L1 6447 6485 -1323 2359 85 0 35 chr20 66125744 66126060 -6027822 - AluY SINE Alu -6 305 1 716 247 69 44 chr20 66126060 66126293 -6027589 + L1MC4a LINE L1 6485 6728 -1080 1992 116 0 7 chr20 66126293 66126568 -6027314 + AluSx SINE Alu 31 303 -9 265 68 68 0 chr20 66126568 66126612 -6027270 + MLT1F LTR MaLR 493 539 -3 709 207 130 12 chr20 66127024 66127193 -6026689 + MER5A DNA MER1_type 1 189 0 2363 53 3 3 chr20 66127479 66127791 -6026091 - AluSx SINE Alu 0 312 1 234 233 123 72 chr20 66128602 66129075 -6024807 + L1MDa LINE L1 1262 1758 -4782 645 282 28 12 chr20 66129136 66129459 -6024423 + L1M4 LINE L1 3608 3935 -2211 * 2825 219 58 38 chr20 66129441 66130230 -6023652 + L1MC3 LINE L1 6541 7345 -440 500 263 0 0 chr20 66130245 66130363 -6023519 + L1ME3A LINE L1 6027 6144 -26 340 367 12 17 chr20 66130777 66131017 -6022865 + MIR SINE MIR 2 240 -22 22 0 0 0 chr20 66131656 66131678 -6022204 + AT_rich Low_complexity Low_complexity 1 22 0 1921 233 18 2 chr20 66131692 66132087 -6021795 - LTR57 LTR ERVL -10 401 1 430 326 58 29 chr20 66132408 66132650 -6021232 + LTR16A LTR ERVL 147 395 -55 4125 139 77 59 chr20 66132662 66133914 -6019968 - pTR5 LTR ERV1 -143 2295 743 27 62 0 0 chr20 66134650 66134698 -6019184 + AT_rich Low_complexity Low_complexity 1 48 0 2344 90 0 0 chr20 66134987 66135275 -6018607 + AluSc SINE Alu 1 288 -21 24 32 0 0 chr20 66135340 66135371 -6018511 + AT_rich Low_complexity Low_complexity 1 31 0 341 269 0 10 chr20 66135518 66135622 -6018260 + L2 LINE L2 3197 3299 -14 681 66 0 0 chr20 66135626 66135717 -6018165 + (TGAA)n Simple_repeat Simple_repeat 4 94 0 241 314 36 29 chr20 66136439 66136576 -6017306 + MIR SINE MIR 54 191 -71 203 200 0 0 chr20 66137333 66137368 -6016514 + T-rich Low_complexity Low_complexity 1 35 0 1432 128 115 0 chr20 66137369 66137587 -6016295 - AluSg SINE Alu -63 247 5 206 314 58 0 chr20 66137840 66137926 -6015956 - MIR SINE MIR -14 248 158 1993 114 64 25 chr20 66138473 66138834 -6015048 - THE1C LTR MaLR 0 375 1 276 241 46 46 chr20 66138928 66139015 -6014867 + MIR SINE MIR 17 103 -159 578 273 207 4 chr20 66139114 66139356 -6014526 + MER110 LTR ERV1 46 336 -155 843 313 35 37 chr20 66139405 66139600 -6014282 - L2 LINE L2 -47 3266 3072 2314 107 3 0 chr20 66139600 66139910 -6013972 - AluSx SINE Alu -1 311 1 843 313 35 37 chr20 66139910 66140299 -6013583 - L2 LINE L2 -241 3072 2686 369 239 9 83 chr20 66140317 66140351 -6013531 - MER58B DNA MER1_type -2080 340 305 2085 221 45 16 chr20 66140351 66140839 -6013043 + MLT1D LTR MaLR 2 503 -2 369 239 9 83 chr20 66140839 66140913 -6012969 - MER58B DNA MER1_type -2115 305 240 241 154 26 0 chr20 66140928 66140967 -6012915 - MER58B DNA MER1_type -301 40 1 2122 135 3 3 chr20 66141050 66141362 -6012520 + AluSx SINE Alu 1 312 0 388 214 133 95 chr20 66142425 66142716 -6011166 + MLT1H LTR MaLR 11 355 -194 305 223 15 9 chr20 66142754 66142839 -6011043 + MLT1H LTR MaLR 472 548 -1 287 257 128 0 chr20 66143169 66143278 -6010604 + MLT1L LTR MaLR 168 290 -325 334 170 203 102 chr20 66143311 66143496 -6010386 + MLT1E2 LTR MaLR 2 191 -398 2353 78 0 0 chr20 66143496 66143800 -6010082 + AluY SINE Alu 1 304 0 2015 221 81 17 chr20 66143966 66144449 -6009433 - LTR40a LTR ERVL -5 514 1 478 266 128 5 chr20 66144527 66144715 -6009167 - MIR SINE MIR -24 238 28 536 263 134 6 chr20 66145328 66145499 -6008383 + MIR SINE MIR 9 201 -61 380 213 118 31 chr20 66145507 66145634 -6008248 - L2 LINE L2 0 3313 3176 374 276 100 13 chr20 66147015 66147254 -6006628 + MIR SINE MIR 3 262 0 876 186 46 42 chr20 66147314 66147551 -6006331 - MIR SINE MIR 0 262 25 188 336 71 18 chr20 66147926 66148039 -6005843 - L2 LINE L2 -508 2806 2688 1795 169 0 13 chr20 66148041 66148349 -6005533 + AluJo SINE Alu 1 304 -8 302 61 41 0 chr20 66148357 66148406 -6005476 + L1PB2 LINE L1 6093 6143 -8 674 176 131 35 chr20 66148792 66148991 -6004891 + MER20 DNA MER1_type 1 218 -1 887 266 92 66 chr20 66149040 66149495 -6004387 - LTR67 LTR ERVL -55 502 36 322 245 82 9 chr20 66149629 66149759 -6004123 - MER113 DNA MER1_type? -190 331 194 * 394 303 26 28 chr20 66149722 66149954 -6003928 - MER106B DNA MER1_type -11 1048 1 357 333 29 29 chr20 66149972 66150146 -6003736 + MER5A DNA MER1_type 10 183 -6 1588 187 3 3 chr20 66150157 66150440 -6003442 + AluJo SINE Alu 1 283 -29 251 281 31 31 chr20 66150443 66150539 -6003343 - MER5B DNA MER1_type -2 176 81 240 309 81 8 chr20 66150570 66150693 -6003189 + MIR SINE MIR 14 145 -117 427 230 23 0 chr20 66150855 66150942 -6002940 - MER5A DNA MER1_type -83 106 18 1011 197 24 5 chr20 66150957 66151170 -6002712 - MER20 DNA MER1_type 0 219 3 1251 167 14 32 chr20 66151743 66152003 -6001879 - L1 LINE L1 -1478 4668 4405 2255 128 0 6 chr20 66152003 66152316 -6001566 - AluSq SINE Alu 0 313 3 1921 117 79 3 chr20 66152323 66152613 -6001269 - AluSx SINE Alu 0 312 1 1251 167 14 32 chr20 66152613 66152626 -6001256 - L1 LINE L1 -1747 4399 4392 237 83 0 0 chr20 66152778 66152814 -6001068 + (GGA)n Simple_repeat Simple_repeat 1 36 0 680 316 24 20 chr20 66153128 66153375 -6000507 - MIR SINE MIR -13 249 2 605 234 137 6 chr20 66153412 66153517 -6000365 - MLT1D LTR MaLR 0 505 415 2241 84 4 0 chr20 66153517 66153792 -6000090 + AluSc SINE Alu 20 295 -14 605 234 137 6 chr20 66153792 66153861 -6000021 - MLT1D LTR MaLR -90 415 308 1176 45 0 0 chr20 66153861 66153993 -5999889 - AluY SINE Alu -179 132 1 1512 198 32 6 chr20 66153993 66154307 -5999575 - MLT1D LTR MaLR -183 322 1 1198 196 61 4 chr20 66154388 66154722 -5999160 - MER110 LTR ERV1 -26 465 70 2163 115 0 3 chr20 66154761 66155048 -5998834 - AluSc SINE Alu -23 286 1 192 273 204 11 chr20 66155048 66155136 -5998746 - MIR SINE MIR -4 258 154 335 326 34 20 chr20 66155148 66155295 -5998587 + MIR SINE MIR 2 150 -112 2053 133 3 38 chr20 66155369 66155540 -5998342 - AluSx SINE Alu -7 305 148 2349 107 0 0 chr20 66155540 66155840 -5998042 - AluSc SINE Alu -9 300 1 2053 133 3 38 chr20 66155840 66155984 -5997898 - AluSx SINE Alu -164 148 1 2228 123 0 3 chr20 66156016 66156318 -5997564 - AluSg SINE Alu -9 301 1 1758 156 32 3 chr20 66156598 66156881 -5997001 - AluJb SINE Alu -21 291 1 2169 86 61 0 chr20 66156916 66157196 -5996686 + AluSg SINE Alu 3 299 -11 347 313 118 33 chr20 66157606 66157910 -5995972 + L1MC4a LINE L1 5557 5886 -1922 788 184 36 67 chr20 66158313 66158536 -5995346 - MER20 DNA MER1_type -3 216 1 716 33 0 11 chr20 66158744 66158834 -5995048 - LTR7 LTR ERV1 0 450 362 377 85 0 34 chr20 66158836 66158895 -5994987 - LTR7 LTR ERV1 -393 57 1 2004 163 0 0 chr20 66158956 66159263 -5994619 - AluJb SINE Alu -5 307 1 21 36 0 0 chr20 66159474 66159502 -5994380 + AT_rich Low_complexity Low_complexity 1 28 0 816 100 0 15 chr20 66159509 66159761 -5994121 + AluSx SINE Alu 1 311 -1 1877 172 0 3 chr20 66159893 66160195 -5993687 + AluJo SINE Alu 1 301 -11 2371 110 0 0 chr20 66160642 66160952 -5992930 - AluSx SINE Alu -2 310 1 2068 123 7 7 chr20 66160958 66161243 -5992639 - AluSx SINE Alu -23 289 5 249 237 34 0 chr20 66161246 66161305 -5992577 - MER5A DNA MER1_type -68 121 61 234 206 43 65 chr20 66161355 66161447 -5992435 - MER5A DNA MER1_type -68 121 32 2248 94 14 14 chr20 66161975 66162272 -5991610 + AluSc SINE Alu 1 297 -12 1164 94 11 50 chr20 66162272 66162484 -5991398 + AluSg/x SINE Alu 134 312 0 1786 180 0 20 chr20 66162767 66163072 -5990810 - AluJo SINE Alu -13 299 1 1065 147 68 0 chr20 66163129 66163320 -5990562 - MER2 DNA MER2_type 0 345 142 580 157 7 50 chr20 66163307 66163344 -5990538 + MER6B DNA MER2_type 49 86 -779 * 2263 103 6 22 chr20 66163344 66163655 -5990227 - AluSx SINE Alu -6 306 1 580 157 7 50 chr20 66163655 66163757 -5990125 + MER6B DNA MER2_type 86 182 -28 812 173 0 8 chr20 66163762 66163895 -5989987 - MER2 DNA MER2_type -213 132 1 356 353 26 19 chr20 66163951 66164107 -5989775 - L1M4 LINE L1 -1233 4913 4757 365 221 23 118 chr20 66164567 66164763 -5989119 + L1MC4 LINE L1 1922 6989 -1333 361 269 0 32 chr20 66164696 66164789 -5989093 - L1MC4 LINE L1 -1339 6703 6614 * 919 163 7 0 chr20 66164790 66164931 -5988951 - AluJb SINE Alu -27 285 144 371 293 23 8 chr20 66164936 66165069 -5988813 + L2 LINE L2 3169 3303 -10 2329 113 0 0 chr20 66165127 66165428 -5988454 + AluSq SINE Alu 4 304 -9 2478 91 10 0 chr20 66165428 66165737 -5988145 + AluSx SINE Alu 1 312 0 2129 115 14 7 chr20 66166015 66166311 -5987571 + AluSg SINE Alu 7 304 -6 752 198 66 18 chr20 66166654 66166821 -5987061 + FAM SINE Alu 1 175 0 975 118 15 0 chr20 66166822 66166957 -5986925 + AluJo SINE Alu 1 137 -175 385 249 38 19 chr20 66167457 66167561 -5986321 - L1MC4 LINE L1 -1139 6703 6558 377 283 20 10 chr20 66167472 66167571 -5986311 + L1MC4 LINE L1 6610 6709 -1333 * 337 92 66 53 chr20 66167602 66167678 -5986204 + L1MA8 LINE L1 6205 6281 -10 2360 92 0 3 chr20 66167832 66168127 -5985755 + AluSx SINE Alu 1 294 -18 2363 109 3 0 chr20 66168808 66169119 -5984763 - AluSp SINE Alu -1 312 1 584 192 54 31 chr20 66169129 66169259 -5984623 - AluJo SINE Alu -178 134 2 2219 124 10 0 chr20 66169343 66169650 -5984232 - AluSx SINE Alu -2 310 1 1752 178 3 20 chr20 66169651 66169954 -5983928 - AluJo SINE Alu -14 298 1 1660 173 49 3 chr20 66170181 66170298 -5983584 + AluJo SINE Alu 1 111 -201 306 0 0 0 chr20 66170298 66170332 -5983550 + (CA)n Simple_repeat Simple_repeat 1 34 0 1660 173 49 3 chr20 66170332 66170498 -5983384 + AluJo SINE Alu 111 297 -15 822 176 6 31 chr20 66170518 66170677 -5983205 + AluSg/x SINE Alu 147 301 -11 314 257 20 20 chr20 66170815 66170916 -5982966 + MER5A DNA MER1_type 6 106 -83 187 330 0 50 chr20 66171116 66171216 -5982666 - L2 LINE L2 -84 3229 3135 2146 130 3 13 chr20 66171275 66171590 -5982292 + AluSx SINE Alu 1 312 0 1780 162 20 13 chr20 66172693 66172995 -5980887 + AluJb SINE Alu 1 304 -8 434 121 0 0 chr20 66172995 66173061 -5980821 + U3 snRNA snRNA 5 70 -147 1892 151 3 60 chr20 66173082 66173218 -5980664 + AluSx SINE Alu 1 143 -169 2464 109 0 0 chr20 66173218 66173530 -5980352 + AluSx SINE Alu 1 312 0 1892 151 3 60 chr20 66173530 66173724 -5980158 + AluSx SINE Alu 143 312 0 320 248 52 85 chr20 66173732 66173885 -5979997 + L1MC/D LINE L1 5290 5437 -922 328 252 108 22 chr20 66174657 66174796 -5979086 + L2 LINE L2 3161 3311 -2 1930 154 7 0 chr20 66175219 66175511 -5978371 - AluJo SINE Alu -12 300 7 368 279 8 41 chr20 66175813 66175880 -5978002 - MIR SINE MIR -48 214 151 2344 104 0 19 chr20 66175880 66176196 -5977686 - AluSx SINE Alu -2 310 1 368 279 8 41 chr20 66176196 66176250 -5977632 - MIR SINE MIR -111 151 97 357 264 37 68 chr20 66176314 66176477 -5977405 + MIR SINE MIR 34 191 -71 2145 133 0 0 chr20 66177156 66177479 -5976403 - AluSx SINE Alu 0 323 1 2303 87 47 0 chr20 66177552 66177850 -5976032 + AluSq SINE Alu 1 312 -1 2657 58 0 0 chr20 66177854 66178164 -5975718 + AluY SINE Alu 1 310 -1 1065 126 65 47 chr20 66178465 66178680 -5975202 - MER20 DNA MER1_type 0 219 1 240 234 169 0 chr20 66178921 66178998 -5974884 + L1M4 LINE L1 4747 4836 -1310 2332 110 0 0 chr20 66179076 66179375 -5974507 + AluSx SINE Alu 1 299 -13 463 271 8 0 chr20 66179693 66179811 -5974071 + MIR SINE MIR 93 211 -51 609 212 0 36 chr20 66179887 66180043 -5973839 + FLAM_C SINE Alu 1 133 0 462 92 0 13 chr20 66180084 66180160 -5973722 + AluSp/q SINE Alu 226 300 -13 2337 92 20 0 chr20 66180218 66180510 -5973372 + AluSp SINE Alu 1 298 -15 1218 182 0 5 chr20 66180524 66180727 -5973155 + AluJb SINE Alu 1 202 -110 769 163 15 7 chr20 66180727 66180862 -5973020 + AluJo/FRAM SINE Alu 161 296 -16 2237 107 0 17 chr20 66180874 66181174 -5972708 + AluSx SINE Alu 1 295 -17 2252 108 0 0 chr20 66181357 66181654 -5972228 - AluSg SINE Alu -8 302 6 190 287 81 0 chr20 66181827 66181914 -5971968 + L2 LINE L2 3161 3254 -18 2481 68 0 43 chr20 66182358 66182684 -5971198 - AluSq SINE Alu -1 312 1 438 253 13 53 chr20 66182691 66182841 -5971041 + L2 LINE L2 3170 3313 0 207 262 75 47 chr20 66183154 66183261 -5970621 - MIR SINE MIR 0 262 153 2410 80 3 3 chr20 66183261 66183562 -5970320 - AluSx SINE Alu -11 301 1 771 122 0 102 chr20 66183975 66184093 -5969789 + AluJo/FLAM SINE Alu 2 104 -198 2326 113 0 0 chr20 66184093 66184395 -5969487 - AluSc SINE Alu -7 302 1 771 122 0 102 chr20 66184395 66184423 -5969459 + AluJo/FLAM SINE Alu 104 133 -169 2104 129 3 0 chr20 66184429 66184744 -5969138 + AluSp SINE Alu 1 316 0 2353 113 0 0 chr20 66184958 66185259 -5968623 - AluSx SINE Alu -11 301 1 774 203 44 6 chr20 66185540 66185722 -5968160 - MER5A DNA MER1_type 0 189 1 1538 132 9 0 chr20 66185741 66185960 -5967922 - AluJb SINE Alu -5 307 87 2400 95 7 0 chr20 66186141 66186446 -5967436 - AluSc SINE Alu -2 307 1 1310 89 0 6 chr20 66186455 66186624 -5967258 - AluY SINE Alu -8 303 136 2303 97 3 10 chr20 66186666 66186976 -5966906 + AluSc SINE Alu 1 308 -1 2227 120 0 3 chr20 66187633 66187934 -5965948 + AluSx SINE Alu 1 300 -12 2534 69 0 3 chr20 66187953 66188259 -5965623 - AluY SINE Alu -6 305 1 1646 123 24 123 chr20 66188768 66189102 -5964780 - AluYb8 SINE Alu -17 301 1 2398 71 0 23 chr20 66189129 66189476 -5964406 + AluSp SINE Alu 2 313 0 219 88 0 0 chr20 66189848 66189882 -5964000 + (TTCC)n Simple_repeat Simple_repeat 1 34 0 33 43 0 0 chr20 66194518 66194565 -5959317 + GC_rich Low_complexity Low_complexity 1 47 0 26 0 0 0 chr20 66194734 66194760 -5959122 + GC_rich Low_complexity Low_complexity 1 26 0 1575 137 112 4 chr20 66198256 66198505 -5955377 + AluSx SINE Alu 1 276 -36 25 0 0 0 chr20 66198505 66198530 -5955352 + AT_rich Low_complexity Low_complexity 1 25 0 1582 139 100 19 chr20 66201064 66201374 -5952508 + MER2 DNA MER2_type 10 344 -1 1718 161 62 0 chr20 66201576 66201867 -5952015 + AluSx SINE Alu 1 309 -3 182 161 36 71 chr20 66202726 66202782 -5951100 + MIR SINE MIR 49 102 -160 249 275 11 33 chr20 66202816 66202907 -5950975 + MIR SINE MIR 172 260 -2 225 94 0 0 chr20 66203963 66203995 -5949887 + (T)n Simple_repeat Simple_repeat 1 32 0 186 43 0 0 chr20 66204610 66204633 -5949249 + (TTTTTG)n Simple_repeat Simple_repeat 3 25 0 2502 83 3 3 chr20 66205027 66205339 -5948543 - AluSx SINE Alu 0 312 1 2470 76 0 7 chr20 66206165 66206468 -5947414 - AluY SINE Alu -10 301 1 2436 76 0 7 chr20 66206652 66206956 -5946926 - AluY SINE Alu -9 302 1 2343 119 0 0 chr20 66208091 66208394 -5945488 - AluSq SINE Alu -10 303 1 252 0 0 0 chr20 66208878 66208906 -5944976 + (TG)n Simple_repeat Simple_repeat 2 29 0 1516 207 51 20 chr20 66209069 66209243 -5944639 + MLT1C LTR MaLR 1 168 -299 2067 127 7 0 chr20 66209243 66209519 -5944363 + AluSx SINE Alu 3 280 -32 2176 97 23 10 chr20 66209526 66209825 -5944057 + AluSp SINE Alu 2 304 -9 2556 66 0 3 chr20 66209825 66210128 -5943754 + AluY SINE Alu 1 302 -9 1516 207 51 20 chr20 66209826 66210337 -5943545 + MLT1C LTR MaLR 173 404 -63 1841 179 0 0 chr20 66210347 66210638 -5943244 - AluJb SINE Alu -21 291 1 355 256 17 36 chr20 66210726 66210854 -5943028 + MER5A DNA MER1_type 53 189 0 1166 148 32 37 chr20 66211009 66211225 -5942657 + AluJo SINE Alu 77 291 -21 2470 59 3 31 chr20 66211232 66211552 -5942330 + AluY SINE Alu 1 311 0 275 302 21 10 chr20 66211563 66211659 -5942223 + L2 LINE L2 3136 3232 -40 265 239 0 0 chr20 66211784 66211858 -5942024 - AluJ/FLAM SINE Alu -245 57 1 227 344 0 21 chr20 66211861 66211954 -5941928 - L3 LINE CR1 -331 1246 1156 363 242 217 17 chr20 66212015 66212316 -5941566 - L2 LINE L2 -287 3026 2664 536 314 118 17 chr20 66212431 66212575 -5941307 - L2 LINE L2 -1 3312 3184 2317 93 0 7 chr20 66212575 66212875 -5941007 - AluSx SINE Alu -14 298 1 536 314 118 17 chr20 66212875 66213017 -5940865 - L2 LINE L2 -129 3184 2997 1714 170 11 7 chr20 66213297 66213579 -5940303 - AluJb SINE Alu -24 288 6 1881 138 3 50 chr20 66214008 66214327 -5939555 + AluJo SINE Alu 1 304 -8 350 225 93 70 chr20 66214457 66214541 -5939341 - L1MC4a LINE L1 -1831 5977 5888 1749 126 56 25 chr20 66214541 66214826 -5939056 - AluJb SINE Alu -18 294 1 350 225 93 70 chr20 66214826 66214870 -5939012 - L1MC4a LINE L1 -1920 5888 5846 1989 125 7 3 chr20 66214893 66215181 -5938701 + AluSq SINE Alu 1 289 -24 196 237 0 0 chr20 66215211 66215249 -5938633 - L2 LINE L2 -19 3253 3216 1914 139 4 0 chr20 66215557 66215824 -5938058 + AluSx SINE Alu 1 268 -44 1067 165 10 16 chr20 66215874 66216068 -5937814 + AluJo SINE Alu 120 312 0 1379 142 160 36 chr20 66216070 66216155 -5937727 + AluSx SINE Alu 1 74 -238 228 35 0 0 chr20 66216155 66216184 -5937698 + (GGCTG)n Simple_repeat Simple_repeat 5 33 0 2350 104 0 0 chr20 66216187 66216485 -5937397 + AluSg SINE Alu 11 308 -2 1379 142 160 36 chr20 66216485 66216670 -5937212 + AluSx SINE Alu 75 309 -3 198 71 0 0 chr20 66216674 66216702 -5937180 + (A)n Simple_repeat Simple_repeat 1 28 0 1507 213 13 10 chr20 66216716 66217017 -5936865 - AluJo SINE Alu -10 302 1 1201 232 12 102 chr20 66217030 66217485 -5936397 - L1ME1 LINE L1 -86 6080 5586 2508 73 0 16 chr20 66217485 66217801 -5936081 - AluY SINE Alu 0 311 1 2298 97 31 0 chr20 66217801 66218091 -5935791 - AluSx SINE Alu -13 299 1 2148 124 14 0 chr20 66218092 66218382 -5935500 - AluSx SINE Alu -18 294 1 2026 137 7 16 chr20 66218382 66218688 -5935194 - AluJb SINE Alu -8 304 2 1201 232 12 102 chr20 66218688 66218728 -5935154 - L1ME1 LINE L1 -498 5668 5626 211 293 47 47 chr20 66218978 66219084 -5934798 + MIR SINE MIR 30 135 -127 2118 105 0 71 chr20 66219142 66219466 -5934416 - AluSx SINE Alu -11 301 1 242 320 146 28 chr20 66219811 66220301 -5933581 + L2 LINE L2 2461 3050 -263 900 220 62 46 chr20 66220466 66220521 -5933361 - MER58B DNA MER1_type -2079 341 288 1573 181 35 35 chr20 66220521 66220808 -5933074 + AluJb SINE Alu 1 287 -25 900 220 62 46 chr20 66220808 66220819 -5933063 - MER58B DNA MER1_type -2132 288 279 2131 121 14 0 chr20 66220819 66221109 -5932773 + AluSx SINE Alu 1 294 -18 900 220 62 46 chr20 66221109 66221297 -5932585 - MER58B DNA MER1_type -2141 279 78 1629 191 7 7 chr20 66221297 66221590 -5932292 + AluJo SINE Alu 17 309 -3 900 220 62 46 chr20 66221590 66221637 -5932245 - MER58B DNA MER1_type -2342 78 33 380 297 54 0 chr20 66222049 66222197 -5931685 + MIR SINE MIR 37 192 -70 285 337 21 42 chr20 66222827 66223020 -5930862 - L2 LINE L2 -175 3138 2950 343 316 160 5 chr20 66223123 66223329 -5930553 - L2 LINE L2 -573 2741 2504 571 219 129 5 chr20 66223738 66223930 -5929952 + MER20 DNA MER1_type 5 219 0 1274 115 0 0 chr20 66223958 66224123 -5929759 - AluSg/x SINE Alu -14 296 132 2350 109 0 7 chr20 66224123 66224427 -5929455 - AluSx SINE Alu -8 304 3 2232 141 0 0 chr20 66224430 66224742 -5929140 - AluSx SINE Alu 0 312 1 2401 91 10 0 chr20 66224940 66225237 -5928645 - AluSx SINE Alu -12 300 1 2082 125 24 3 chr20 66225855 66226152 -5927730 - AluSx SINE Alu -9 303 1 2197 93 3 30 chr20 66226186 66226488 -5927394 + AluY SINE Alu 1 294 -17 843 148 0 22 chr20 66226662 66226797 -5927085 - FLAM_C SINE Alu -9 134 3 399 261 128 33 chr20 66226952 66227132 -5926750 - MIR SINE MIR -58 204 8 196 260 20 0 chr20 66227186 66227236 -5926646 - MIR SINE MIR -3 259 209 2289 96 3 3 chr20 66227237 66227530 -5926352 - AluSg1 SINE Alu -16 293 1 35 54 0 0 chr20 66227539 66227595 -5926287 + AT_rich Low_complexity Low_complexity 1 56 0 258 86 0 0 chr20 66227616 66227678 -5926204 + Alu SINE Alu 251 312 0 2130 113 0 3 chr20 66228044 66228347 -5925535 + AluSx SINE Alu 1 302 0 1977 141 0 7 chr20 66228350 66228677 -5925205 + AluSx SINE Alu 1 325 0 1812 149 20 43 chr20 66228840 66229142 -5924740 - AluJo SINE Alu -15 297 3 550 272 65 96 chr20 66229322 66229436 -5924446 - L2 LINE L2 -507 2807 2691 2281 114 0 0 chr20 66229436 66229735 -5924147 - AluSx SINE Alu -13 299 1 550 272 65 96 chr20 66229735 66230006 -5923876 - L2 LINE L2 -623 2691 2434 2383 106 0 3 chr20 66230515 66230818 -5923064 - AluSx SINE Alu -10 302 1 260 266 9 88 chr20 66230827 66230886 -5922996 - MIR SINE MIR -14 248 201 2221 129 0 0 chr20 66230886 66231181 -5922701 - AluSx SINE Alu -17 295 1 260 266 9 88 chr20 66231181 66231234 -5922648 - MIR SINE MIR -61 201 145 2324 114 0 0 chr20 66231416 66231714 -5922168 + AluSc SINE Alu 2 299 -10 2053 137 23 7 chr20 66231915 66232222 -5921660 - AluJb SINE Alu 0 312 1 2161 128 0 10 chr20 66232226 66232532 -5921350 - AluSx SINE Alu -9 303 1 604 135 48 19 chr20 66232744 66232848 -5921034 + U6 snRNA snRNA 1 107 0 29 0 0 0 chr20 66232848 66232877 -5921005 + AT_rich Low_complexity Low_complexity 1 29 0 389 255 106 43 chr20 66232881 66233069 -5920813 - L2 LINE L2 -23 3290 3091 189 0 0 0 chr20 66233093 66233114 -5920768 + (GGGGA)n Simple_repeat Simple_repeat 3 23 0 553 288 189 9 chr20 66233124 66233457 -5920425 - L2 LINE L2 -337 2977 2585 1368 237 94 18 chr20 66233457 66233891 -5919991 + MLT1C LTR MaLR 1 467 0 585 271 100 48 chr20 66233891 66234079 -5919803 - L2 LINE L2 -725 2589 2381 1900 145 51 0 chr20 66234079 66234375 -5919507 + AluJb SINE Alu 1 311 -1 585 271 100 48 chr20 66234375 66234455 -5919427 - L2 LINE L2 -933 2381 2307 240 297 54 0 chr20 66234468 66234579 -5919303 - L1MC/D LINE L1 -1916 5892 5776 2421 105 0 6 chr20 66234585 66234900 -5918982 - AluSq SINE Alu 0 313 1 1938 153 0 13 chr20 66235001 66235302 -5918580 - AluJo SINE Alu -15 297 1 2149 142 3 0 chr20 66235433 66235744 -5918138 + AluSx SINE Alu 1 312 0 1380 146 3 140 chr20 66235755 66236105 -5917777 + AluJb SINE Alu 1 302 0 258 333 78 0 chr20 66236301 66236403 -5917479 - MER103 DNA DNA -46 120 11 2116 84 40 40 chr20 66236923 66237220 -5916662 - AluSg SINE Alu -13 297 1 314 279 16 8 chr20 66237221 66237350 -5916532 + L1MB7 LINE L1 6040 6169 -15 1020 128 41 58 chr20 66237350 66237522 -5916360 - AluSg/x SINE Alu -10 302 134 1940 139 7 26 chr20 66237522 66237825 -5916057 - AluSx SINE Alu -15 297 1 828 138 0 0 chr20 66237867 66237983 -5915899 + AluJb SINE Alu 1 116 -196 2267 95 7 0 chr20 66237983 66238277 -5915605 - AluSq SINE Alu -17 296 1 246 296 111 0 chr20 66238450 66238558 -5915324 - L2 LINE L2 -5 3308 3189 451 288 42 26 chr20 66239021 66239331 -5914551 - L2 LINE L2 -227 3045 2733 424 223 71 9 chr20 66239569 66239681 -5914201 - MER5C DNA MER1_type 0 324 206 811 200 7 0 chr20 66239687 66239832 -5914050 + FRAM SINE Alu 1 146 -30 2207 121 0 16 chr20 66239858 66240172 -5913710 - AluSx SINE Alu -3 309 1 498 242 0 0 chr20 66240185 66240295 -5913587 + A-rich Low_complexity Low_complexity 1 113 -19 405 161 196 9 chr20 66240295 66240407 -5913475 + FLAM_C SINE Alu 1 133 0 498 242 0 0 chr20 66240407 66240428 -5913454 + A-rich Low_complexity Low_complexity 112 132 0 385 240 24 40 chr20 66240466 66240591 -5913291 + L1MC4 LINE L1 7115 7237 -805 336 252 81 8 chr20 66240610 66240733 -5913149 + MLT1C LTR MaLR 27 158 -347 1757 178 0 10 chr20 66240770 66241073 -5912809 - AluJb SINE Alu -1 311 12 1479 179 40 50 chr20 66241093 66241394 -5912488 - AluJo SINE Alu -14 298 1 742 233 34 10 chr20 66241463 66241677 -5912205 + MLT1C LTR MaLR 263 460 -7 794 173 0 0 chr20 66241688 66241821 -5912061 + FLAM_C SINE Alu 1 133 0 454 238 144 11 chr20 66241856 66242037 -5911845 + L1MC4 LINE L1 7232 7436 -606 1288 157 0 14 chr20 66242593 66242803 -5911079 - AluJo SINE Alu -24 288 82 2265 110 0 0 chr20 66243032 66243322 -5910560 + AluSx SINE Alu 2 291 -21 661 192 11 71 chr20 66243344 66243484 -5910398 - MER5B DNA MER1_type -3 175 47 2491 42 42 0 chr20 66243484 66243772 -5910110 + AluY SINE Alu 1 300 -11 661 192 11 71 chr20 66243772 66243813 -5910069 - MER5B DNA MER1_type -131 47 5 2452 97 0 0 chr20 66244105 66244414 -5909468 - AluSx SINE Alu -3 309 1 2613 51 0 0 chr20 66244776 66245070 -5908812 - AluY SINE Alu -17 294 1 1941 110 35 26 chr20 66245757 66246067 -5907815 - AluSq SINE Alu 0 313 1 537 283 119 60 chr20 66246270 66246686 -5907196 - L1MC4a LINE L1 -1872 5936 5473 2434 85 3 0 chr20 66246686 66246980 -5906902 - AluSp SINE Alu -18 295 1 537 283 119 60 chr20 66246980 66247150 -5906732 - L1MC4a LINE L1 -2335 5473 5315 2353 112 3 3 chr20 66247151 66247463 -5906419 - AluSx SINE Alu 0 312 1 1327 169 80 0 chr20 66247464 66247701 -5906181 - AluJb SINE Alu 0 312 57 2096 121 48 0 chr20 66247947 66248236 -5905646 - AluSx SINE Alu -9 303 1 356 310 120 27 chr20 66248370 66248628 -5905254 - L2 LINE L2 -468 2846 2565 2318 122 0 0 chr20 66249348 66249660 -5904222 - AluSx SINE Alu 0 312 1 436 322 75 28 chr20 66249668 66249923 -5903959 + HAL1 LINE L1 359 625 -1882 251 232 126 32 chr20 66249953 66250048 -5903834 + MER53 DNA DNA 1 104 -85 279 328 51 46 chr20 66250075 66250270 -5903612 + HAL1 LINE L1 658 853 -1654 1560 172 15 37 chr20 66250358 66250631 -5903251 + AluJo SINE Alu 11 277 -35 2502 64 0 0 chr20 66250632 66250928 -5902954 - AluY SINE Alu -15 296 1 493 240 8 0 chr20 66251849 66251978 -5901904 + MER94 DNA DNA 1 130 -4 2503 56 0 31 chr20 66252095 66252416 -5901466 - AluY SINE Alu 0 311 1 306 0 0 0 chr20 66252473 66252507 -5901375 + (T)n Simple_repeat Simple_repeat 1 34 0 761 240 77 5 chr20 66252555 66252751 -5901131 + MER58A DNA MER1_type 4 213 -11 744 159 24 8 chr20 66252756 66252882 -5901000 + FLAM_C SINE Alu 3 130 -13 247 297 45 63 chr20 66252929 66253010 -5900872 - MER5B DNA MER1_type -34 144 64 2092 103 22 0 chr20 66253010 66253283 -5900599 - AluSx SINE Alu -33 279 1 247 297 45 63 chr20 66253283 66253312 -5900570 - MER5B DNA MER1_type -114 64 36 830 193 56 0 chr20 66253318 66253479 -5900403 + FAM SINE Alu 1 170 -5 1969 129 35 28 chr20 66253715 66254033 -5899849 + 7SLRNA srpRNA srpRNA 1 320 0 257 315 54 18 chr20 66254088 66254199 -5899683 - MIR SINE MIR -66 196 82 363 329 79 35 chr20 66254345 66254661 -5899221 - L2 LINE L2 -15 3257 2928 375 286 88 26 chr20 66255055 66255449 -5898433 - LTR16A LTR ERVL 0 457 1 201 233 0 0 chr20 66255451 66255494 -5898388 + MIR SINE MIR 79 121 -141 301 297 177 11 chr20 66255496 66255671 -5898211 + MIR SINE MIR 53 256 -6 193 212 67 129 chr20 66255739 66255882 -5898000 + MIR SINE MIR 21 154 -68 240 111 0 0 chr20 66256981 66257017 -5896865 + (GA)n Simple_repeat Simple_repeat 1 36 0 2167 185 135 2 chr20 66257054 66257513 -5896369 + MLT2B1 LTR ERVL 1 520 0 325 238 50 20 chr20 66257513 66257606 -5896276 - MER104 DNA Tc2 -60 120 25 1167 126 91 39 chr20 66257606 66257659 -5896223 - Tigger3(Golem) DNA MER2_type 0 3028 2979 1857 146 55 0 chr20 66257659 66257934 -5895948 - AluSx SINE Alu -22 290 1 1167 126 91 39 chr20 66257934 66258110 -5895772 - Tigger3(Golem) DNA MER2_type -49 2979 2787 2277 119 0 0 chr20 66258112 66258406 -5895476 + AluSx SINE Alu 1 294 -18 1101 163 49 0 chr20 66258406 66258590 -5895292 - Tigger3(Golem) DNA MER2_type -2836 193 1 501 225 87 7 chr20 66258721 66258859 -5895023 + MLT1K LTR MaLR 411 559 -29 1950 134 13 33 chr20 66258920 66259247 -5894635 - AluY SINE Alu 0 311 2 908 290 109 38 chr20 66259267 66259771 -5894111 - MLT1K LTR MaLR -19 569 30 2279 122 3 0 chr20 66260401 66260712 -5893170 - AluSq SINE Alu -1 312 1 1566 184 55 26 chr20 66260720 66260954 -5892928 - MLT2D LTR ERVL -56 358 109 2529 78 0 0 chr20 66260954 66261263 -5892619 - AluY SINE Alu 0 311 3 1566 184 55 26 chr20 66261263 66261376 -5892506 - MLT2D LTR ERVL -305 109 1 1627 254 74 2 chr20 66261385 66261858 -5892024 - L1ME3 LINE L1 -239 5923 5417 2294 118 0 3 chr20 66261916 66262221 -5891661 - AluSx SINE Alu -8 304 1 232 330 11 0 chr20 66262297 66262385 -5891497 - MIR SINE MIR -6 256 168 2348 108 0 9 chr20 66262391 66262706 -5891176 - AluSq SINE Alu -1 312 1 585 146 191 0 chr20 66262708 66262818 -5891064 - AluJo/FLAM SINE Alu -171 131 1 325 327 39 0 chr20 66263417 66263521 -5890361 + MIR SINE MIR 20 127 -135 189 309 73 0 chr20 66263552 66263607 -5890275 + L2 LINE L2 3251 3309 -4 831 272 57 37 chr20 66263620 66263918 -5889964 + MER46C DNA MER2_type 1 304 -34 575 288 99 80 chr20 66263917 66264340 -5889542 - MLT1K LTR MaLR -21 567 137 * 365 309 126 31 chr20 66264679 66264996 -5888886 + L2 LINE L2 2945 3291 -22 1840 157 35 3 chr20 66264997 66265283 -5888599 - AluJb SINE Alu -17 295 1 195 100 0 0 chr20 66265298 66265328 -5888554 + (TGAA)n Simple_repeat Simple_repeat 1 30 0 2360 83 3 22 chr20 66265494 66265808 -5888074 - AluSp SINE Alu -5 308 1 2036 133 20 0 chr20 66265817 66266110 -5887772 - AluSx SINE Alu -13 299 1 344 313 0 14 chr20 66266234 66266317 -5887565 + CT-rich Low_complexity Low_complexity 2 84 -59 2414 97 0 3 chr20 66266317 66266329 -5887553 - AluY SINE Alu -2 309 298 243 0 0 0 chr20 66266329 66266356 -5887526 + (TTAAA)n Simple_repeat Simple_repeat 1 27 0 2414 97 0 3 chr20 66266356 66266653 -5887229 - AluY SINE Alu -13 298 1 344 313 0 14 chr20 66266653 66266713 -5887169 + CT-rich Low_complexity Low_complexity 84 143 0 265 150 0 0 chr20 66267196 66267236 -5886646 - Alu SINE Alu -263 40 1 2033 141 3 10 chr20 66267242 66267548 -5886334 - AluSx SINE Alu -8 304 1 867 134 146 0 chr20 66267552 66267723 -5886159 - MSTA LTR MaLR -232 196 1 246 316 79 9 chr20 66267962 66268076 -5885806 - MIR SINE MIR -109 153 32 947 219 56 14 chr20 66269095 66269281 -5884601 + MER58A DNA MER1_type 1 199 -2221 2286 97 3 3 chr20 66269281 66269579 -5884303 - AluY SINE Alu -13 298 1 947 219 56 14 chr20 66269579 66269607 -5884275 + MER58A DNA MER1_type 199 224 0 639 303 64 67 chr20 66269675 66270065 -5883817 - L2 LINE L2 0 3272 2884 2293 105 7 0 chr20 66270201 66270505 -5883377 - AluSq SINE Alu -7 306 1 735 216 52 26 chr20 66270552 66270746 -5883136 - MER3 DNA MER1_type -6 203 5 2464 62 3 40 chr20 66270807 66271129 -5882753 - AluSp SINE Alu -3 310 1 350 221 47 12 chr20 66271173 66271259 -5882623 + MIR SINE MIR 50 138 -124 318 260 229 65 chr20 66271658 66272012 -5881870 - MLT1K LTR MaLR -9 579 168 245 200 93 27 chr20 66272176 66272251 -5881631 - L2 LINE L2 -54 3259 3180 1255 230 114 8 chr20 66273043 66273421 -5880461 - MLT1C LTR MaLR -49 418 1 252 238 0 111 chr20 66273519 66273700 -5880182 + G-rich Low_complexity Low_complexity 2 162 0 1553 171 53 0 chr20 66273829 66273942 -5879940 + AluJo SINE Alu 1 107 -205 189 0 0 0 chr20 66273942 66273963 -5879919 + (CAAAA)n Simple_repeat Simple_repeat 5 25 0 1553 171 53 0 chr20 66273963 66274130 -5879752 + AluJo SINE Alu 107 296 -16 820 236 78 11 chr20 66274733 66275168 -5878714 - MLT1D LTR MaLR -8 479 1 327 167 97 0 chr20 66275170 66275242 -5878640 + MIR SINE MIR 65 143 -119 1631 177 56 7 chr20 66275254 66275542 -5878340 - AluJb SINE Alu -10 302 1 636 267 159 13 chr20 66275552 66275784 -5878098 + MLT1J LTR MaLR 48 313 -198 876 219 6 9 chr20 66275915 66276457 -5877425 + CT-rich Low_complexity Low_complexity 1 539 0 284 300 50 0 chr20 66276762 66276862 -5877020 - MIR SINE MIR -107 155 51 1866 149 6 44 chr20 66277287 66277603 -5876279 - AluJb SINE Alu -8 304 1 2278 106 10 0 chr20 66277865 66278158 -5875724 + AluSx SINE Alu 1 296 -16 2025 129 37 17 chr20 66278170 66278465 -5875417 + AluSx SINE Alu 1 301 -11 2367 63 0 7 chr20 66278469 66278782 -5875100 + AluY SINE Alu 1 311 0 1098 244 25 7 chr20 66278782 66279057 -5874825 - L1MD2 LINE L1 -17 6342 6063 1044 187 50 117 chr20 66279057 66279416 -5874466 - MLT1A1 LTR MaLR 0 365 31 429 241 134 109 chr20 66279444 66279571 -5874311 - L1MD2 LINE L1 -292 6067 5945 2181 137 3 0 chr20 66279571 66279878 -5874004 + AluSx SINE Alu 1 308 -4 429 241 134 109 chr20 66279878 66280300 -5873582 - L1MD2 LINE L1 -414 5945 5502 598 276 202 20 chr20 66280773 66281114 -5872768 + L2 LINE L2 2911 3313 0 382 331 156 17 chr20 66281191 66281551 -5872331 + HAL1 LINE L1 880 1289 -1218 376 135 27 0 chr20 66281552 66281626 -5872256 + GA-rich Low_complexity Low_complexity 4 79 0 2333 125 0 3 chr20 66283206 66283519 -5870363 - AluSq SINE Alu -1 312 1 1064 97 0 0 chr20 66284005 66284139 -5869743 + AluJb SINE Alu 1 134 -178 539 88 0 0 chr20 66284201 66284281 -5869601 + MADE1 DNA Mariner 1 80 0 773 239 16 11 chr20 66284281 66284465 -5869417 + MIR SINE MIR 78 262 0 256 384 15 0 chr20 66284578 66284711 -5869171 - MIR SINE MIR -108 154 20 191 196 157 0 chr20 66284788 66284839 -5869043 - L2 LINE L2 -17 3255 3197 2279 102 0 13 chr20 66284891 66285238 -5868644 - AluY SINE Alu 0 343 1 438 204 65 9 chr20 66285238 66285346 -5868536 - MER45 DNA AcHobo -1467 114 1 2435 92 0 3 chr20 66285429 66285734 -5868148 - AluSx SINE Alu -8 304 1 233 294 75 103 chr20 66285916 66285994 -5867888 - L2 LINE L2 -8 3264 3185 2726 74 69 7 chr20 66285994 66286412 -5867470 + MLT2A1 LTR ERVL 1 444 0 233 294 75 103 chr20 66286412 66286693 -5867189 - L2 LINE L2 -87 3185 2915 2309 113 0 0 chr20 66286794 66287096 -5866786 + AluSx SINE Alu 1 302 -10 608 233 204 0 chr20 66288459 66288635 -5865247 - MER20 DNA MER1_type -3 216 5 1167 148 278 0 chr20 66289034 66289264 -5864618 - AluSx SINE Alu -6 296 3 2296 125 0 0 chr20 66290219 66290530 -5863352 - AluY SINE Alu 0 311 1 678 270 87 9 chr20 66290531 66290638 -5863244 - MLT1K LTR MaLR -46 542 445 1748 208 7 0 chr20 66290638 66290946 -5862936 - AluJb SINE Alu -2 310 1 678 270 87 9 chr20 66290946 66291068 -5862814 - MLT1K LTR MaLR -143 445 295 249 228 18 0 chr20 66291214 66291271 -5862611 - MLT1K LTR MaLR -4 584 527 1494 158 0 21 chr20 66291559 66291799 -5862083 - AluSx SINE Alu -75 237 3 1568 89 0 0 chr20 66291937 66292153 -5861729 + AluSg/x SINE Alu 92 307 0 22 0 0 0 chr20 66292184 66292206 -5861676 + AT_rich Low_complexity Low_complexity 1 22 0 2401 159 88 25 chr20 66292254 66292577 -5861305 - L1MC3 LINE L1 -2 7783 7409 1737 126 0 34 chr20 66292577 66292840 -5861042 + AluSq SINE Alu 40 293 -20 2401 159 88 25 chr20 66292840 66293075 -5860807 - L1MC3 LINE L1 -376 7409 7190 1139 120 64 112 chr20 66293214 66293272 -5860610 + AluSg/x SINE Alu 76 135 -175 2578 62 3 0 chr20 66293272 66293581 -5860301 + AluY SINE Alu 1 310 -1 1139 120 64 112 chr20 66293581 66293755 -5860127 + AluSg/x SINE Alu 135 297 -13 2177 135 0 0 chr20 66294103 66294399 -5859483 - AluSg SINE Alu -14 296 1 1829 71 0 0 chr20 66294699 66294923 -5858959 + AluY SINE Alu 1 224 -87 242 226 0 19 chr20 66295488 66295541 -5858341 - MLT1K LTR MaLR -332 256 205 426 313 97 10 chr20 66296208 66296403 -5857479 + Charlie8 DNA MER1_type 2 213 -2204 187 276 48 29 chr20 66297458 66297563 -5856319 + MIR SINE MIR 73 179 -83 349 217 14 14 chr20 66297610 66297679 -5856203 + L1MC4 LINE L1 6641 6709 -1333 602 147 0 0 chr20 66297691 66297786 -5856096 - FRAM SINE Alu -26 150 56 452 294 8 0 chr20 66297795 66297921 -5855961 - MIR SINE MIR -27 235 109 1746 112 131 12 chr20 66297921 66298180 -5855702 - AluSq SINE Alu -18 295 6 2481 99 0 3 chr20 66298199 66298512 -5855370 - AluSq SINE Alu 0 313 2 180 0 0 0 chr20 66298512 66298532 -5855350 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 42 36 0 0 chr20 66298539 66298595 -5855287 + AT_rich Low_complexity Low_complexity 1 56 0 883 159 0 0 chr20 66298595 66298721 -5855161 - FLAM_C SINE Alu -17 126 1 23 0 0 0 chr20 66298732 66298755 -5855127 + AT_rich Low_complexity Low_complexity 1 23 0 231 314 157 7 chr20 66298821 66298974 -5854908 + MIR SINE MIR 86 261 -1 504 288 49 22 chr20 66298985 66299211 -5854671 - L1MC4a LINE L1 -1854 5954 5723 2456 84 0 28 chr20 66299725 66300045 -5853837 - AluSx SINE Alu -1 311 1 276 270 50 40 chr20 66300237 66300337 -5853545 + MIR SINE MIR 106 206 -56 216 261 85 73 chr20 66300568 66300733 -5853149 + L2 LINE L2 2895 3061 -252 196 248 202 16 chr20 66300898 66301027 -5852855 + MER5A DNA MER1_type 14 166 -23 * 347 271 10 0 chr20 66300957 66301053 -5852829 - MER5A DNA MER1_type -84 105 9 234 0 0 0 chr20 66301175 66301201 -5852681 + (CCCCCA)n Simple_repeat Simple_repeat 5 30 0 2248 114 0 0 chr20 66301238 66301535 -5852347 - AluSx SINE Alu -15 297 1 399 188 47 114 chr20 66302046 66302107 -5851775 + MIR SINE MIR 104 168 -94 2385 93 7 0 chr20 66302107 66302417 -5851465 + AluSx SINE Alu 1 312 0 399 188 47 114 chr20 66302417 66302504 -5851378 + MIR SINE MIR 168 242 -20 1256 234 34 57 chr20 66302909 66303074 -5850808 + MER20B DNA MER1_type 29 196 -587 2171 119 3 0 chr20 66303074 66303368 -5850514 - AluSx SINE Alu -17 295 1 1256 234 34 57 chr20 66303368 66303620 -5850262 + MER20B DNA MER1_type 196 436 -347 444 291 18 48 chr20 66303754 66303894 -5849988 + MIR SINE MIR 23 159 -103 2138 104 7 20 chr20 66303894 66304191 -5849691 + AluSx SINE Alu 1 293 -19 444 291 18 48 chr20 66304191 66304215 -5849667 + MIR SINE MIR 159 182 -80 217 304 0 13 chr20 66304451 66304530 -5849352 + C-rich Low_complexity Low_complexity 4 81 0 331 290 11 0 chr20 66304704 66304797 -5849085 - MIR SINE MIR -65 197 104 339 229 83 10 chr20 66305420 66305516 -5848366 - L2 LINE L2 -2 3311 3209 1502 193 84 0 chr20 66305516 66305848 -5848034 - MLT1A1 LTR MaLR 0 365 6 195 256 232 0 chr20 66305952 66306034 -5847848 - MIR SINE MIR -63 145 45 1885 195 61 2 chr20 66306061 66306471 -5847411 - MLT1D LTR MaLR 0 505 72 285 229 16 0 chr20 66306658 66306719 -5847163 - MLT1D LTR MaLR -442 63 2 324 294 111 0 chr20 66306759 66306885 -5846997 + MIR SINE MIR 90 229 -33 1204 162 0 6 chr20 66306945 66307124 -5846758 - AluJb SINE Alu -50 262 85 378 146 0 0 chr20 66307180 66307262 -5846620 + (TG)n Simple_repeat Simple_repeat 1 82 0 377 270 147 49 chr20 66308227 66308390 -5845492 + MIR SINE MIR 16 194 -68 1766 170 0 14 chr20 66308520 66308808 -5845074 - AluJb SINE Alu -28 284 1 524 155 23 39 chr20 66308831 66308960 -5844922 - MER20 DNA MER1_type -92 127 1 383 265 118 63 chr20 66309006 66309244 -5844638 - HAL1b LINE L1 -35 1313 1063 377 296 31 44 chr20 66309353 66309512 -5844370 - MIR SINE MIR 0 262 106 378 302 0 39 chr20 66309625 66309754 -5844128 - MLT1J LTR MaLR -159 352 229 1056 109 17 0 chr20 66309871 66309898 -5843984 + (TTTC)n Simple_repeat Simple_repeat 1 205 0 1056 109 17 0 chr20 66309898 66310073 -5843809 + (TTTC)n Simple_repeat Simple_repeat 2 179 0 2024 122 29 26 chr20 66310089 66310580 -5843302 - AluSx SINE Alu 0 492 1 341 267 103 0 chr20 66310619 66310735 -5843147 + MER45A DNA AcHobo 24 151 -27 428 227 15 38 chr20 66311127 66311259 -5842623 + L1MC4 LINE L1 7511 7639 -403 2308 114 0 0 chr20 66311467 66311766 -5842116 - AluSx SINE Alu -13 299 1 2520 61 0 10 chr20 66312437 66312749 -5841133 - AluY SINE Alu 0 311 3 1147 29 0 22 chr20 66312750 66312888 -5840994 - AluY SINE Alu -176 135 1 686 275 44 72 chr20 66312936 66313256 -5840626 - MLT1J LTR MaLR -199 312 2 397 229 130 16 chr20 66313295 66313394 -5840488 + MER58C DNA MER1_type 2 88 -2332 2157 111 16 7 chr20 66313394 66313700 -5840182 - AluSq SINE Alu -4 309 1 397 229 130 16 chr20 66313700 66313792 -5840090 + MER58C DNA MER1_type 88 215 0 255 305 121 62 chr20 66313855 66314219 -5839663 - L2 LINE L2 -50 3263 2873 270 0 0 0 chr20 66314219 66314249 -5839633 + (TTG)n Simple_repeat Simple_repeat 3 32 0 255 305 121 62 chr20 66314249 66314274 -5839608 - L2 LINE L2 -440 2873 2851 551 222 33 20 chr20 66315037 66315190 -5838692 - MLT1K LTR MaLR -30 558 404 180 158 0 0 chr20 66315193 66315231 -5838651 + CT-rich Low_complexity Low_complexity 2 39 0 216 347 0 28 chr20 66315679 66315751 -5838131 + MIR SINE MIR 29 98 -164 222 37 0 0 chr20 66316074 66316101 -5837781 + (GGGGA)n Simple_repeat Simple_repeat 3 29 0 556 212 246 5 chr20 66316579 66316782 -5837100 - MIR SINE MIR -3 259 8 528 322 60 0 chr20 66317170 66317369 -5836513 - L2 LINE L2 -178 3135 2925 522 291 80 59 chr20 66318138 66318375 -5835507 + MIR SINE MIR 2 243 -19 711 273 101 17 chr20 66318424 66318662 -5835220 + MIR SINE MIR 5 262 0 387 269 85 28 chr20 66318650 66318791 -5835091 + L2 LINE L2 3149 3297 -16 * 2190 125 0 0 chr20 66318799 66319095 -5834787 + AluSx SINE Alu 1 296 -16 2316 159 32 53 chr20 66319819 66320292 -5833590 + MLT2B3 LTR ERVL 1 463 -91 2763 212 39 42 chr20 66320293 66320913 -5832969 - MSTD-int LTR MaLR -1039 696 77 2191 115 0 3 chr20 66320913 66321200 -5832682 - AluSx SINE Alu -26 286 1 2763 212 39 42 chr20 66321200 66321277 -5832605 - MSTD-int LTR MaLR -1658 77 1 2272 181 15 5 chr20 66321278 66321670 -5832212 - MSTD LTR MaLR 0 396 1 2366 107 0 0 chr20 66322177 66322476 -5831406 - AluSx SINE Alu -13 299 1 618 291 57 73 chr20 66322677 66323100 -5830782 - MLT1K LTR MaLR -31 557 142 516 274 108 33 chr20 66323674 66323886 -5829996 + Charlie8 DNA MER1_type 38 265 -2152 243 323 81 0 chr20 66324013 66324112 -5829770 + MIR SINE MIR 61 167 -95 * 435 271 100 35 chr20 66324107 66324277 -5829605 - L2 LINE L2 -5 3308 3128 859 243 9 9 chr20 66324349 66324563 -5829319 + MER58A DNA MER1_type 1 214 -10 2310 105 3 0 chr20 66324609 66324903 -5828979 + AluSx SINE Alu 1 295 -17 744 233 34 34 chr20 66325528 66325655 -5828227 + MER45A DNA AcHobo 3 132 -1449 2295 115 0 3 chr20 66325655 66325967 -5827915 - AluSp SINE Alu -2 311 1 744 233 34 34 chr20 66325967 66326015 -5827867 + MER45A DNA AcHobo 131 178 0 418 345 14 0 chr20 66326286 66326428 -5827454 - MIR SINE MIR -45 217 74 310 346 103 0 chr20 66326480 66326616 -5827266 + MIR SINE MIR 101 250 -12 207 283 0 0 chr20 66326622 66326721 -5827161 + (ATG)n Simple_repeat Simple_repeat 1 99 0 840 196 0 0 chr20 66326748 66326927 -5826955 + (ATG)n Simple_repeat Simple_repeat 2 180 0 * 864 141 13 26 chr20 66326904 66327140 -5826742 + (ATGGTG)n Simple_repeat Simple_repeat 1 232 0 1547 197 109 64 chr20 66327253 66327683 -5826199 - MLT1C LTR MaLR 0 467 6 331 171 26 0 chr20 66328987 66329063 -5824819 + GA-rich Low_complexity Low_complexity 4 81 0 2449 83 3 6 chr20 66329098 66329410 -5824472 + AluY SINE Alu 1 311 0 1767 168 7 3 chr20 66329450 66329735 -5824147 - AluJo SINE Alu -26 286 1 24 32 0 0 chr20 66329831 66329862 -5824020 + AT_rich Low_complexity Low_complexity 1 31 0 259 302 69 0 chr20 66329957 66330108 -5823774 - L2 LINE L2 -322 2991 2827 204 221 65 52 chr20 66330768 66330845 -5823037 - L3 LINE CR1 -48 1529 1452 287 239 18 64 chr20 66331045 66331154 -5822728 - MLT1K LTR MaLR -3 585 482 653 296 84 9 chr20 66331255 66331481 -5822401 - MLT1K LTR MaLR -318 270 28 1354 113 9 68 chr20 66331521 66331742 -5822140 - AluSg/x SINE Alu -19 291 84 1001 240 49 67 chr20 66331879 66332270 -5821612 - MLT1K LTR MaLR -165 423 40 1145 111 43 0 chr20 66332642 66332823 -5821059 + AluSg/x SINE Alu 131 310 0 2295 114 16 0 chr20 66332834 66333140 -5820742 + AluSx SINE Alu 2 312 0 482 323 97 9 chr20 66333368 66333585 -5820297 + MIR SINE MIR 23 258 -4 490 255 105 85 chr20 66333726 66334020 -5819862 - MLT1J LTR MaLR -211 300 1 393 287 41 62 chr20 66334177 66334331 -5819551 - Charlie8 DNA MER1_type -65 276 127 2320 86 24 0 chr20 66334331 66334621 -5819261 + AluSx SINE Alu 1 297 -15 393 287 41 62 chr20 66334621 66334710 -5819172 - Charlie8 DNA MER1_type -214 127 38 2187 100 69 0 chr20 66334748 66335039 -5818843 - AluSq SINE Alu -2 311 1 2924 214 58 25 chr20 66335066 66335839 -5818043 - L1ME1 LINE L1 -4 6162 5416 2637 122 23 41 chr20 66335839 66336281 -5817601 - MER57B LTR ERV1 0 434 1 2924 214 58 25 chr20 66336281 66336591 -5817291 - L1ME1 LINE L1 -750 5416 5118 2249 102 0 3 chr20 66336591 66336897 -5816985 - AluSq SINE Alu 0 305 1 2924 214 58 25 chr20 66336897 66337152 -5816730 - L1ME1 LINE L1 -1048 5118 4767 23 54 0 0 chr20 66337200 66337237 -5816645 + AT_rich Low_complexity Low_complexity 1 37 0 748 211 33 58 chr20 66337258 66337500 -5816382 - L1MD3 LINE L1 -15 7980 7745 321 218 124 56 chr20 66337500 66337662 -5816220 + MER104 DNA Tc2 1 180 0 454 272 51 32 chr20 66337670 66337828 -5816054 + MIR SINE MIR 100 260 -2 573 305 73 11 chr20 66338563 66338740 -5815142 + MIR SINE MIR 27 214 -48 1978 160 19 3 chr20 66338742 66339049 -5814833 + AluJb SINE Alu 1 312 0 2138 201 117 67 chr20 66339120 66339489 -5814393 - MLT1E1 LTR MaLR 0 654 240 2419 107 0 0 chr20 66339489 66339798 -5814084 + AluSc SINE Alu 1 309 0 2138 201 117 67 chr20 66339798 66340051 -5813831 - MLT1E1 LTR MaLR -414 240 1 425 143 0 71 chr20 66340208 66340292 -5813590 - MSTA LTR MaLR -130 298 221 1907 123 153 0 chr20 66340298 66340631 -5813251 + MSTA LTR MaLR 45 428 0 640 305 91 0 chr20 66340796 66341006 -5812876 - MIR SINE MIR -20 242 14 278 371 0 0 chr20 66341410 66341515 -5812367 + MIR SINE MIR 134 238 -24 408 191 118 27 chr20 66341516 66341626 -5812256 + L1PB4 LINE L1 6037 6156 0 239 345 34 25 chr20 66342047 66342166 -5811716 + L2 LINE L2 3153 3272 0 227 43 43 43 chr20 66342272 66342319 -5811563 - Alu SINE Alu 0 308 262 480 278 11 17 chr20 66342462 66342638 -5811244 - L1MC5 LINE L1 -178 7783 7609 366 169 113 0 chr20 66342932 66343003 -5810879 - L1M4 LINE L1 -5187 1355 1277 2083 97 4 4 chr20 66343005 66343283 -5810599 - AluSx SINE Alu -1 311 34 600 204 37 78 chr20 66343318 66343393 -5810489 + MER106A DNA MER1_type 1 78 -158 916 119 8 15 chr20 66343393 66343527 -5810355 - FLAM_C SINE Alu 0 133 1 600 204 37 78 chr20 66343527 66343696 -5810186 + MER106A DNA MER1_type 78 235 -1 459 208 169 15 chr20 66343709 66343839 -5810043 + MIR SINE MIR 112 261 -1 204 239 22 0 chr20 66344053 66344099 -5809783 - MIR SINE MIR -105 157 111 567 241 112 86 chr20 66344872 66345104 -5808778 + MIR SINE MIR 21 258 -4 431 277 129 18 chr20 66345102 66345192 -5808690 + L2 LINE L2 2790 2869 -444 * 867 67 40 0 chr20 66345192 66345341 -5808541 + (TCCCC)n Simple_repeat Simple_repeat 4 158 0 431 277 129 18 chr20 66345341 66345509 -5808373 + L2 LINE L2 2869 3065 -248 524 247 74 42 chr20 66345748 66345938 -5807944 - MIR SINE MIR -44 218 23 2241 109 3 0 chr20 66345950 66346244 -5807638 - AluSx SINE Alu -17 295 1 669 212 7 7 chr20 66346686 66346837 -5807045 + MER20 DNA MER1_type 10 160 -59 1303 192 14 14 chr20 66346885 66347171 -5806711 + MER33 DNA MER1_type 35 320 -4 216 342 36 18 chr20 66347177 66347288 -5806594 + L2 LINE L2 3150 3262 -10 1032 166 19 8 chr20 66347327 66347770 -5806112 + GA-rich Low_complexity Low_complexity 1 629 0 2245 113 0 3 chr20 66348363 66348673 -5805209 + AluSx SINE Alu 1 309 -3 1045 275 63 11 chr20 66349130 66349508 -5804374 - L1ME4a LINE L1 -226 5895 5498 328 272 127 49 chr20 66349533 66349697 -5804185 - L1ME4a LINE L1 -57 6064 5914 216 67 0 0 chr20 66349697 66349727 -5804155 + (TTTTA)n Simple_repeat Simple_repeat 1 30 0 2013 128 0 7 chr20 66349727 66350009 -5803873 - AluSx SINE Alu -32 280 1 328 272 127 49 chr20 66350009 66350229 -5803653 - L1ME4a LINE L1 -206 5915 5649 530 296 57 63 chr20 66350231 66350662 -5803220 - L1ME4a LINE L1 -502 5619 5149 1454 161 98 9 chr20 66350664 66350838 -5803044 - L1MA8 LINE L1 -13 6278 6121 2276 102 10 0 chr20 66350838 66351133 -5802749 + AluSx SINE Alu 1 298 -14 1454 161 98 9 chr20 66351133 66351275 -5802607 - L1MA8 LINE L1 -170 6121 5933 847 84 0 0 chr20 66351295 66351402 -5802480 - U6 snRNA snRNA 0 107 1 219 103 0 0 chr20 66351749 66351778 -5802104 + MIR SINE MIR 116 144 -64 226 252 27 18 chr20 66351898 66352009 -5801873 + L1M4 LINE L1 5122 5233 -913 237 65 0 0 chr20 66352159 66352190 -5801692 + (TGAA)n Simple_repeat Simple_repeat 1 31 0 2157 130 0 0 chr20 66352249 66352549 -5801333 - AluSx SINE Alu -1 311 12 2186 108 7 3 chr20 66352561 66352858 -5801024 - AluSx SINE Alu -5 307 10 316 276 70 45 chr20 66353340 66353496 -5800386 + L3b LINE CR1 1289 1448 -135 185 138 0 0 chr20 66353642 66353671 -5800211 - MIR SINE MIR -118 144 116 244 336 78 6 chr20 66353674 66353903 -5799979 - L2 LINE L2 -6 3307 3014 650 310 82 17 chr20 66353976 66354392 -5799490 - MLT1K LTR MaLR -9 579 137 2240 126 0 3 chr20 66354813 66355177 -5798705 - AluSg SINE Alu 0 363 1 2330 109 0 0 chr20 66355564 66355866 -5798016 + AluSx SINE Alu 1 302 -10 419 338 0 7 chr20 66355884 66356026 -5797856 + MIR SINE MIR 15 155 -107 222 276 110 31 chr20 66356006 66356133 -5797749 - L2 LINE L2 -906 2408 2272 * 307 202 22 0 chr20 66357010 66357099 -5796783 + (TCCA)n Simple_repeat Simple_repeat 2 92 0 294 95 0 0 chr20 66357093 66357135 -5796747 + (TTCC)n Simple_repeat Simple_repeat 1 42 0 * 1969 165 7 0 chr20 66357456 66357753 -5796129 - AluJb SINE Alu -13 299 1 264 111 0 93 chr20 66357801 66357855 -5796027 - LTR67 LTR ERVL -2 555 507 * 1178 180 27 23 chr20 66357847 66358305 -5795577 + MLT1D LTR MaLR 6 505 0 2233 123 0 13 chr20 66358320 66358621 -5795261 - AluSx SINE Alu -15 297 1 860 192 39 43 chr20 66359392 66359600 -5794282 - MER20 DNA MER1_type -12 207 1 263 291 106 69 chr20 66359613 66359974 -5793908 + L2 LINE L2 2564 2910 -362 2368 107 0 0 chr20 66359974 66360274 -5793608 - AluSg SINE Alu -10 300 1 2394 102 3 0 chr20 66360275 66360579 -5793303 - AluSx SINE Alu -7 305 1 263 291 106 69 chr20 66360579 66360647 -5793235 + L2 LINE L2 2909 3015 -257 295 184 79 16 chr20 66360795 66360960 -5792922 - MLT1J LTR MaLR -202 309 95 420 295 76 56 chr20 66361012 66361146 -5792736 + L2 LINE L2 3005 3135 -178 2395 90 0 16 chr20 66361146 66361456 -5792426 - AluSx SINE Alu -3 309 5 420 295 76 56 chr20 66361456 66361609 -5792273 + L2 LINE L2 3135 3298 -15 239 269 21 54 chr20 66362129 66362222 -5791660 - L2 LINE L2 -47 3225 3136 255 106 0 21 chr20 66362294 66362341 -5791541 + L1MA9 LINE L1 6262 6307 -5 234 302 29 29 chr20 66362394 66362533 -5791349 - L2 LINE L2 -213 3059 2921 1440 201 33 86 chr20 66362549 66362856 -5791026 - MLT1C LTR MaLR -5 462 189 2388 101 10 0 chr20 66362856 66363163 -5790719 + AluSg SINE Alu 1 310 0 1440 201 33 86 chr20 66363163 66363343 -5790539 - MLT1C LTR MaLR -278 189 1 570 335 114 17 chr20 66363441 66363844 -5790038 - L2 LINE L2 -547 2767 2326 1222 242 81 10 chr20 66363844 66364309 -5789573 + MLT1H LTR MaLR 1 541 -8 203 296 66 71 chr20 66364309 66364505 -5789377 - L2 LINE L2 -980 2334 2140 1104 229 127 45 chr20 66364727 66365190 -5788692 + MLT1H LTR MaLR 11 511 -38 351 270 103 32 chr20 66365190 66365316 -5788566 + MIR SINE MIR 128 262 0 303 323 132 12 chr20 66365394 66365561 -5788321 - L1ME LINE L1 -399 5763 5577 293 123 0 35 chr20 66366153 66366210 -5787672 + (TCTCCC)n Simple_repeat Simple_repeat 5 59 0 976 172 0 0 chr20 66366214 66366371 -5787511 - AluSg/x SINE Alu -10 302 146 303 98 0 0 chr20 66366371 66366412 -5787470 - Alu SINE Alu -261 41 1 2132 105 10 14 chr20 66366651 66366945 -5786937 - AluY SINE Alu -18 293 1 1991 166 0 0 chr20 66366950 66367245 -5786637 - AluJb SINE Alu -16 296 2 2382 92 0 7 chr20 66368838 66369142 -5784740 + AluSx SINE Alu 1 302 -10 184 262 60 48 chr20 66369149 66369233 -5784649 - MIR SINE MIR -86 176 92 2205 63 4 0 chr20 66369294 66369562 -5784320 - AluY SINE Alu -8 303 35 225 35 0 0 chr20 66369562 66369591 -5784291 - Alu SINE Alu -218 83 55 738 19 19 48 chr20 66369591 66369695 -5784187 - AluY SINE Alu -216 102 2 186 191 0 0 chr20 66370289 66370336 -5783546 + (CA)n Simple_repeat Simple_repeat 1 47 0 443 256 13 6 chr20 66370353 66370509 -5783373 + (CA)n Simple_repeat Simple_repeat 1 157 0 332 220 6 0 chr20 66370554 66370873 -5783009 + (CA)n Simple_repeat Simple_repeat 1 321 0 219 202 0 0 chr20 66370887 66370976 -5782906 + (CA)n Simple_repeat Simple_repeat 1 89 0 364 340 69 21 chr20 66371473 66371661 -5782221 + MIR SINE MIR 25 221 -41 1795 179 3 3 chr20 66371826 66372127 -5781755 - AluJb SINE Alu -11 301 1 403 196 88 20 chr20 66372204 66372306 -5781576 + L2 LINE L2 3142 3250 -22 221 237 0 51 chr20 66373263 66373322 -5780560 + MIR SINE MIR 90 145 -63 205 286 107 86 chr20 66374569 66374709 -5779173 - L2 LINE L2 0 3313 3171 733 292 41 9 chr20 66374731 66374950 -5778932 - MIR SINE MIR -22 240 15 599 336 43 0 chr20 66375002 66375234 -5778648 - L2 LINE L2 -161 3111 2870 1119 241 154 41 chr20 66375384 66375939 -5777943 + MLT1G3 LTR MaLR 1 530 0 667 273 43 35 chr20 66375949 66376083 -5777799 + MLT1L LTR MaLR 162 300 -315 1947 167 0 19 chr20 66376083 66376401 -5777481 + AluJb SINE Alu 1 312 0 667 273 43 35 chr20 66376401 66376497 -5777385 + MLT1L LTR MaLR 300 394 -221 274 289 139 84 chr20 66377050 66377186 -5776696 + MIR SINE MIR 11 159 -103 1981 116 39 3 chr20 66377186 66377470 -5776412 + AluSq SINE Alu 1 294 -19 274 289 139 84 chr20 66377470 66377499 -5776383 + MIR SINE MIR 159 185 -77 660 263 61 18 chr20 66377499 66377727 -5776155 - MLT1K LTR MaLR -4 584 347 2036 128 7 0 chr20 66378071 66378376 -5775506 - MSTA LTR MaLR 0 428 122 723 201 0 19 chr20 66378586 66378740 -5775142 - MER20 DNA MER1_type 0 219 69 747 124 0 0 chr20 66378745 66378858 -5775024 - MSTA LTR MaLR -314 114 2 3328 100 25 31 chr20 66378928 66378939 -5774943 - L1PA10 LINE L1 -10 6158 6148 366 23 0 0 chr20 66378939 66378982 -5774900 + (TTTAA)n Simple_repeat Simple_repeat 3 45 0 3328 100 25 31 chr20 66378982 66379343 -5774539 - L1PA10 LINE L1 -20 6148 5786 2299 96 0 0 chr20 66379343 66379653 -5774229 - AluSg SINE Alu 0 310 1 3328 100 25 31 chr20 66379653 66379790 -5774092 - L1PA10 LINE L1 -382 5786 5650 1816 205 4 60 chr20 66379832 66380311 -5773571 - L1MB3 LINE L1 -1 6182 5731 1930 104 89 0 chr20 66380530 66380810 -5773072 - AluSx SINE Alu -7 305 1 208 237 0 0 chr20 66381294 66381332 -5772550 + (CAG)n Simple_repeat Simple_repeat 1 38 0 408 321 66 25 chr20 66381481 66381783 -5772099 + L2 LINE L2 2722 3035 -237 1056 218 14 9 chr20 66381873 66382089 -5771793 - MER20 DNA MER1_type 0 219 3 1129 216 35 4 chr20 66382382 66382684 -5771198 + MER33 DNA MER1_type 1 302 -22 413 136 0 0 chr20 66382999 66383058 -5770824 + AluJ/FRAM SINE Alu 232 290 -22 717 280 24 64 chr20 66383075 66383371 -5770511 - MLT1J LTR MaLR -5 506 223 234 333 69 0 chr20 66383378 66383450 -5770432 - L2 LINE L2 -15 3257 3181 398 244 67 15 chr20 66383458 66383593 -5770289 + L2 LINE L2 2425 2566 -748 206 114 57 0 chr20 66383617 66383652 -5770230 + L2 LINE L2 3008 3044 -269 227 152 22 0 chr20 66383679 66383725 -5770157 + GA-rich Low_complexity Low_complexity 4 50 0 364 102 17 0 chr20 66383750 66383809 -5770073 - Alu SINE Alu -10 291 232 224 290 92 30 chr20 66383888 66384019 -5769863 + MIR SINE MIR 118 256 -6 1142 189 38 5 chr20 66384607 66384819 -5769063 - MER20 DNA MER1_type 0 219 1 782 210 12 0 chr20 66385938 66386100 -5767782 + L1MD1 LINE L1 6079 6242 0 358 226 202 24 chr20 66386146 66386270 -5767612 - MIR SINE MIR -112 150 5 420 280 176 20 chr20 66386411 66386762 -5767120 - L2 LINE L2 -213 3059 2658 666 275 49 49 chr20 66386768 66387012 -5766870 - L2 LINE L2 -18 3295 3052 503 296 85 58 chr20 66387711 66387854 -5766028 + L1ME LINE L1 5444 5582 -539 1544 191 0 38 chr20 66387854 66388147 -5765735 - AluJo SINE Alu -18 294 13 503 296 85 58 chr20 66388147 66388368 -5765514 + L1ME LINE L1 5582 5818 -303 2751 163 15 32 chr20 66388378 66388726 -5765156 + L1MC3 LINE L1 7241 7578 -207 2515 87 3 0 chr20 66388726 66389035 -5764847 + AluSp SINE Alu 2 311 -2 2751 163 15 32 chr20 66389035 66389219 -5764663 + L1MC3 LINE L1 7578 7764 -21 1652 151 0 53 chr20 66389236 66389535 -5764347 + AluJo SINE Alu 20 302 -10 2260 132 3 0 chr20 66390083 66390394 -5763488 - AluSx SINE Alu 0 312 1 280 331 153 6 chr20 66390525 66390682 -5763200 - MIR SINE MIR -70 192 13 1069 158 6 0 chr20 66391344 66391509 -5762373 + FRAM SINE Alu 1 166 0 482 245 103 13 chr20 66393205 66393360 -5760522 - MER20 DNA MER1_type -17 202 34 757 193 28 6 chr20 66393375 66393551 -5760331 - MER53 DNA DNA -9 180 1 434 308 41 6 chr20 66393851 66394023 -5759859 + MLT1K LTR MaLR 164 341 -247 273 277 21 21 chr20 66394066 66394160 -5759722 + MLT1K LTR MaLR 463 556 -32 641 300 176 18 chr20 66394521 66394918 -5758964 + L2 LINE L2 2854 3313 0 245 260 58 48 chr20 66394945 66395049 -5758833 + L2 LINE L2 3168 3272 0 191 282 18 73 chr20 66395230 66395340 -5758542 + MIR SINE MIR 136 239 -23 204 308 39 0 chr20 66395373 66395451 -5758431 - MIR3 SINE MIR -54 154 74 2035 131 3 3 chr20 66396160 66396451 -5757431 + AluSg SINE Alu 2 292 -18 481 244 6 70 chr20 66396560 66396600 -5757282 - MIR SINE MIR -71 191 150 4036 94 7 7 chr20 66396600 66397154 -5756728 + MER41A LTR ERV1 1 554 0 481 244 6 70 chr20 66397154 66397269 -5756613 - MIR SINE MIR -112 150 46 190 216 0 39 chr20 66397345 66397396 -5756486 - MIR SINE MIR -103 159 111 3794 94 46 24 chr20 66397440 66397655 -5756227 - MER41A LTR ERV1 0 554 345 2380 78 0 0 chr20 66397655 66397949 -5755933 - AluY SINE Alu -17 294 1 3794 94 46 24 chr20 66397949 66398275 -5755607 - MER41A LTR ERV1 -209 345 1 606 231 34 0 chr20 66398380 66398527 -5755355 + MIR SINE MIR 70 221 -41 309 240 27 13 chr20 66399056 66399131 -5754751 - MIR SINE MIR -113 149 74 512 157 29 0 chr20 66399648 66399750 -5754132 - MER53 DNA DNA -84 105 1 464 246 0 26 chr20 66399886 66400000 -5753882 + MER81 DNA DNA 4 114 0 436 147 20 67 chr20 66400208 66400358 -5753524 + MER113 DNA MER1_type? 99 241 -280 2459 201 11 0 chr20 66400683 66401160 -5752722 + Tigger6a DNA MER2_type 7 488 -595 274 282 13 0 chr20 66401228 66401306 -5752576 - MER117 DNA MER1_type -5 192 114 773 289 46 5 chr20 66401335 66401553 -5752329 + MIR SINE MIR 31 257 -5 276 316 31 0 chr20 66401579 66401677 -5752205 - MER117 DNA MER1_type -96 101 1 409 323 109 15 chr20 66402659 66402860 -5751022 - MIR SINE MIR -14 248 29 462 270 95 0 chr20 66403637 66403826 -5750056 + MLT1L LTR MaLR 405 611 -4 257 276 0 13 chr20 66404138 66404214 -5749668 + GA-rich Low_complexity Low_complexity 2 76 0 332 157 0 0 chr20 66404438 66404489 -5749393 + L2 LINE L2 3186 3236 -36 796 158 0 25 chr20 66404499 66404744 -5749138 + (TGGA)n Simple_repeat Simple_repeat 1 238 0 549 180 12 29 chr20 66404792 66404964 -5748918 + (TGGA)n Simple_repeat Simple_repeat 3 171 0 624 221 60 7 chr20 66405113 66405262 -5748620 - MER5A DNA MER1_type -30 159 3 2316 163 39 5 chr20 66405287 66405724 -5748158 - MER66A LTR ERV1 0 478 27 2287 195 38 17 chr20 66406117 66406593 -5747289 + MER66B LTR ERV1 1 486 0 642 273 49 36 chr20 66406685 66406993 -5746889 + LTR16A1 LTR ERVL 146 457 0 7195 187 107 28 chr20 66407482 66409108 -5744774 + MER52A LTR ERV1 1 1754 -1 402 282 19 0 chr20 66409579 66409682 -5744200 - MIR SINE MIR -107 155 51 518 333 149 24 chr20 66409692 66410142 -5743740 + L2 LINE L2 2807 3312 -1 428 179 200 0 chr20 66410429 66410524 -5743358 + MER81 DNA DNA 1 114 0 565 269 25 90 chr20 66410589 66410912 -5742970 - MLT1J LTR MaLR -110 401 100 480 248 9 9 chr20 66410991 66411096 -5742786 - MER81 DNA DNA -2 112 8 343 321 136 27 chr20 66411688 66411872 -5742010 - MIR SINE MIR -32 230 27 341 244 26 0 chr20 66412495 66412573 -5741309 + MIR SINE MIR 113 192 -70 420 200 0 0 chr20 66412668 66412763 -5741119 + GA-rich Low_complexity Low_complexity 1 95 0 1786 161 33 0 chr20 66412799 66413109 -5740773 + AluJo SINE Alu 1 319 0 2109 149 0 0 chr20 66413163 66413472 -5740410 + AluSx SINE Alu 1 309 -3 390 317 0 0 chr20 66413482 66413605 -5740277 + MIR SINE MIR 136 258 -4 303 261 67 8 chr20 66413626 66413745 -5740137 + MIR SINE MIR 137 262 0 255 303 0 0 chr20 66414375 66414494 -5739388 + (TATG)n Simple_repeat Simple_repeat 4 122 0 250 235 0 0 chr20 66414512 66414563 -5739319 + MER4-int LTR ERV1 1112 1162 -5436 238 231 14 41 chr20 66414585 66414732 -5739150 + (TATG)n Simple_repeat Simple_repeat 3 145 0 697 254 68 32 chr20 66414896 66415148 -5738734 - Charlie8 DNA MER1_type -2144 273 13 684 166 24 142 chr20 66415246 66415335 -5738547 + MER20 DNA MER1_type 2 100 -119 261 0 0 0 chr20 66415335 66415364 -5738518 + (TGG)n Simple_repeat Simple_repeat 1 29 0 684 166 24 142 chr20 66415364 66415467 -5738415 + MER20 DNA MER1_type 100 161 -58 2308 128 0 0 chr20 66415467 66415780 -5738102 + AluSq SINE Alu 1 313 0 684 166 24 142 chr20 66415780 66415833 -5738049 + MER20 DNA MER1_type 161 219 0 467 304 84 22 chr20 66415979 66416128 -5737754 - MIR SINE MIR -21 241 72 200 35 35 0 chr20 66416128 66416157 -5737725 + (CA)n Simple_repeat Simple_repeat 1 30 0 467 304 84 22 chr20 66416157 66416234 -5737648 - MIR SINE MIR -190 72 1 297 323 184 32 chr20 66416264 66416574 -5737308 + L2 LINE L2 2916 3272 0 782 235 11 27 chr20 66416632 66416815 -5737067 - MIR SINE MIR -18 244 65 398 301 98 73 chr20 66417011 66417450 -5736432 - L1 LINE L1 -754 5392 4943 437 263 150 6 chr20 66417996 66418156 -5735726 - MIR SINE MIR -41 221 39 249 355 18 31 chr20 66418191 66418303 -5735579 + L1ME LINE L1 5595 5707 -414 1711 178 3 23 chr20 66418303 66418612 -5735270 - AluJb SINE Alu -9 303 1 249 355 18 31 chr20 66418612 66418727 -5735155 + L1ME LINE L1 5707 5819 -302 1007 173 34 43 chr20 66418875 66419083 -5734799 - MER20 DNA MER1_type -13 206 1 2226 116 0 19 chr20 66419089 66419400 -5734482 + AluSx SINE Alu 1 305 -7 216 0 0 0 chr20 66419428 66419452 -5734430 + (TCCC)n Simple_repeat Simple_repeat 3 26 0 573 300 114 17 chr20 66419457 66419747 -5734135 + L2 LINE L2 2996 3313 0 657 273 35 15 chr20 66419759 66419957 -5733925 - MIR SINE MIR -6 256 55 2121 140 0 3 chr20 66420196 66420504 -5733378 - AluSx SINE Alu -5 307 1 210 290 50 10 chr20 66420849 66420949 -5732933 + L2 LINE L2 2950 3053 -219 1003 266 97 29 chr20 66421004 66421387 -5732495 + MLT1C LTR MaLR 59 467 0 394 269 78 42 chr20 66421440 66421607 -5732275 + MIR SINE MIR 90 262 0 363 309 134 50 chr20 66421732 66421846 -5732036 + L1ME4a LINE L1 5716 5819 -302 2228 113 3 0 chr20 66421846 66422139 -5731743 + AluSq SINE Alu 2 295 -18 363 309 134 50 chr20 66422139 66422286 -5731596 + L1ME4a LINE L1 5819 5999 -122 236 167 56 0 chr20 66422314 66422368 -5731514 + GA-rich Low_complexity Low_complexity 2 58 0 193 139 56 0 chr20 66422505 66422541 -5731341 + MIR SINE MIR 105 142 -120 414 252 173 0 chr20 66422552 66422708 -5731174 + MIR SINE MIR 61 247 -15 416 246 136 0 chr20 66424038 66424156 -5729726 + MER45A DNA AcHobo 1 134 -44 281 171 200 0 chr20 66424317 66424387 -5729495 + L2 LINE L2 2967 3050 -263 413 214 11 0 chr20 66425330 66425419 -5728463 - MER81 DNA DNA -5 109 20 198 88 18 53 chr20 66425496 66425553 -5728329 + (CCCCCT)n Simple_repeat Simple_repeat 5 59 0 2008 176 40 9 chr20 66425834 66426260 -5727622 - L1MB2 LINE L1 -2 6169 5731 509 331 0 0 chr20 66426508 66426647 -5727235 - MIR SINE MIR -19 243 105 261 314 38 0 chr20 66427398 66427503 -5726379 - L1ME4a LINE L1 -1 6120 6012 654 230 50 63 chr20 66427917 66428139 -5725743 - MER20 DNA MER1_type 0 219 1 279 79 0 0 chr20 66428885 66428923 -5724959 + (TG)n Simple_repeat Simple_repeat 2 39 0 455 306 90 59 chr20 66429108 66429396 -5724486 - L1ME4a LINE L1 -18 6103 5807 291 229 10 0 chr20 66429407 66429471 -5724411 + MER91B DNA MER1_type 1 68 -128 230 294 63 0 chr20 66429575 66429701 -5724181 + L1ME1 LINE L1 5951 6084 -82 834 149 16 0 chr20 66429715 66429836 -5724046 + FLAM_C SINE Alu 1 123 -20 258 81 0 0 chr20 66429836 66429873 -5724009 + (CA)n Simple_repeat Simple_repeat 2 38 0 324 197 0 0 chr20 66429883 66429954 -5723928 + L1MB7 LINE L1 6109 6179 -5 345 222 22 33 chr20 66429998 66430088 -5723794 - MIR SINE MIR -89 173 85 1752 169 31 29 chr20 66431076 66431461 -5722421 + L1MC1 LINE L1 5762 6147 -186 1935 181 0 0 chr20 66431461 66431760 -5722122 + AluJb SINE Alu 1 299 -13 2204 108 31 0 chr20 66431768 66432054 -5721828 + AluSx SINE Alu 3 297 -15 513 253 81 105 chr20 66432063 66432348 -5721534 + L2 LINE L2 3036 3313 0 326 308 104 71 chr20 66432643 66432854 -5721028 + MIR SINE MIR 10 227 -35 367 354 106 16 chr20 66432871 66433182 -5720700 - L2 LINE L2 -17 3255 2917 2529 220 21 13 chr20 66433402 66433934 -5719948 - MLT1F LTR MaLR -4 538 3 2134 118 0 3 chr20 66434819 66435106 -5718776 + AluSx SINE Alu 1 286 -26 588 251 73 21 chr20 66435683 66435874 -5718008 - MIR SINE MIR -3 259 59 2325 80 0 45 chr20 66436003 66436316 -5717566 + AluY SINE Alu 1 299 -12 424 330 11 62 chr20 66436419 66436773 -5717109 + L1MC4a LINE L1 5604 5939 -1869 195 42 0 0 chr20 66436957 66436981 -5716901 + (TA)n Simple_repeat Simple_repeat 2 25 0 248 302 53 53 chr20 66437815 66438004 -5715878 - MIR SINE MIR -35 227 39 222 305 114 9 chr20 66438117 66438222 -5715660 + L2 LINE L2 3152 3267 -5 743 185 22 22 chr20 66438248 66438560 -5715322 + GA-rich Low_complexity Low_complexity 1 312 0 256 253 185 19 chr20 66438671 66438833 -5715049 + MLT1J2 LTR MaLR 259 447 -3 1791 125 60 12 chr20 66439100 66439419 -5714463 - MER1B DNA MER1_type 0 337 4 780 194 129 22 chr20 66439546 66439778 -5714104 - LTR16A1 LTR ERVL 0 457 201 536 271 43 57 chr20 66440056 66440281 -5713601 - MIR SINE MIR -35 227 3 537 292 125 6 chr20 66440769 66440937 -5712945 + MIR SINE MIR 27 214 -48 1803 282 50 53 chr20 66441111 66441355 -5712527 - L1ME LINE L1 -4822 1439 1196 2416 82 0 3 chr20 66441355 66441658 -5712224 - AluY SINE Alu -9 302 1 1803 282 50 53 chr20 66441658 66442032 -5711850 - L1ME LINE L1 -5065 1196 823 2274 112 7 3 chr20 66442032 66442328 -5711554 + AluSx SINE Alu 3 299 -13 1803 282 50 53 chr20 66442328 66443028 -5710854 - L1ME LINE L1 -5438 823 58 182 267 0 116 chr20 66443038 66443124 -5710758 - MIR3 SINE MIR -52 156 81 846 309 104 9 chr20 66443141 66443572 -5710310 - L2 LINE L2 -15 3298 2827 2818 96 0 3 chr20 66443590 66443955 -5709927 + THE1B LTR MaLR 1 364 0 4900 50 67 3 chr20 66444180 66444828 -5709054 + L1PA7 LINE L1 5474 6161 0 647 286 28 61 chr20 66444835 66445016 -5708866 - MIR SINE MIR -30 232 64 1972 142 0 0 chr20 66445016 66445325 -5708557 + AluJb SINE Alu 1 309 0 647 286 28 61 chr20 66445325 66445374 -5708508 - MIR SINE MIR -198 64 15 486 283 21 14 chr20 66445604 66445749 -5708133 + MER58A DNA MER1_type 3 148 0 468 148 11 11 chr20 66445749 66445833 -5708049 + MER53 DNA DNA 104 187 -2 2532 58 0 6 chr20 66446594 66446905 -5706977 - AluY SINE Alu -1 310 2 335 271 24 0 chr20 66447078 66447163 -5706719 - MIR SINE MIR -75 133 47 23 0 0 0 chr20 66447217 66447240 -5706642 + AT_rich Low_complexity Low_complexity 1 23 0 2325 99 30 0 chr20 66447240 66447542 -5706340 + AluSx SINE Alu 1 311 -1 2165 98 14 3 chr20 66448242 66448537 -5705345 - AluSq SINE Alu -15 298 1 2162 127 35 49 chr20 66448571 66448940 -5704942 + THE1B LTR MaLR 1 364 0 199 269 181 71 chr20 66449197 66449268 -5704614 + L2 LINE L2 2815 2877 -395 4294 80 0 31 chr20 66449268 66449665 -5704217 - MER41A LTR ERV1 0 554 179 2280 116 7 0 chr20 66449665 66449975 -5703907 - AluSx SINE Alu 0 312 1 4294 80 0 31 chr20 66449975 66450149 -5703733 - MER41A LTR ERV1 -375 179 1 199 269 181 71 chr20 66450149 66450441 -5703441 + L2 LINE L2 2877 3218 -54 367 294 21 71 chr20 66450495 66450584 -5703298 + MIR SINE MIR 63 133 -129 2127 114 37 0 chr20 66450584 66450881 -5703001 + AluSq SINE Alu 1 308 -5 367 294 21 71 chr20 66450881 66450987 -5702895 + MIR SINE MIR 133 243 -19 317 216 113 21 chr20 66450966 66451063 -5702819 - L2 LINE L2 -3 3310 3205 * 260 253 209 22 chr20 66451184 66451275 -5702607 + MIR SINE MIR 96 203 -59 330 327 110 22 chr20 66451294 66451840 -5702042 - L2 LINE L2 -170 3143 2492 1966 142 22 19 chr20 66451850 66452052 -5701830 + AluJo SINE Alu 1 206 -106 4286 81 5 25 chr20 66452052 66452210 -5701672 + MER41A LTR ERV1 1 161 -393 2121 109 0 7 chr20 66452210 66452540 -5701342 + AluSg SINE Alu 1 328 0 4286 81 5 25 chr20 66452540 66452945 -5700937 + MER41A LTR ERV1 161 554 0 1966 142 22 19 chr20 66452945 66453053 -5700829 + AluJo SINE Alu 206 312 0 21 0 0 0 chr20 66453265 66453286 -5700596 + AT_rich Low_complexity Low_complexity 1 21 0 2434 96 0 3 chr20 66455048 66455361 -5698521 - AluSx SINE Alu 0 312 1 4846 167 62 40 chr20 66455635 66455716 -5698166 + L1MC3 LINE L1 6637 6715 -1070 1857 149 3 3 chr20 66455716 66456004 -5697878 + AluSx SINE Alu 7 294 -18 4846 167 62 40 chr20 66456004 66457045 -5696837 + L1MC3 LINE L1 6715 7784 -1 2358 117 0 0 chr20 66457236 66457544 -5696338 + AluSx SINE Alu 1 308 -4 347 253 89 20 chr20 66457553 66457699 -5696183 + MLT1K LTR MaLR 411 566 -22 2234 99 0 10 chr20 66458232 66458535 -5695347 - AluSg SINE Alu -10 300 1 429 208 109 0 chr20 66459248 66459349 -5694533 - L2 LINE L2 0 3313 3202 976 197 33 33 chr20 66459707 66459920 -5693962 - MSTD LTR MaLR 0 396 184 836 86 0 16 chr20 66459921 66460049 -5693833 + (TTCC)n Simple_repeat Simple_repeat 1 126 0 1569 97 12 47 chr20 66460049 66460168 -5693714 - L1PA8 LINE L1 0 6172 6050 2192 103 26 19 chr20 66460168 66460478 -5693404 - AluSx SINE Alu 0 312 1 1569 97 12 47 chr20 66460478 66460615 -5693267 - L1PA8 LINE L1 -122 6050 5925 422 207 71 73 chr20 66460618 66460777 -5693105 - MSTC LTR MaLR -238 158 1 618 258 102 70 chr20 66460900 66461337 -5692545 + L2 LINE L2 2643 3065 -248 1643 157 20 31 chr20 66461337 66461630 -5692252 - AluJo SINE Alu -10 302 13 618 258 102 70 chr20 66461630 66461689 -5692193 + L2 LINE L2 3065 3121 -192 207 0 0 0 chr20 66461689 66461712 -5692170 + (TTG)n Simple_repeat Simple_repeat 2 24 0 618 258 102 70 chr20 66461712 66461871 -5692011 + L2 LINE L2 3121 3299 -14 717 63 0 0 chr20 66461875 66461970 -5691912 + (TGAA)n Simple_repeat Simple_repeat 4 98 0 311 314 36 29 chr20 66462692 66462829 -5691053 + MIR SINE MIR 54 191 -71 212 194 0 0 chr20 66463586 66463622 -5690260 + T-rich Low_complexity Low_complexity 1 36 0 1446 128 115 0 chr20 66463623 66463841 -5690041 - AluSg SINE Alu -63 247 5 241 314 58 0 chr20 66464094 66464180 -5689702 - MIR SINE MIR -14 248 158 2018 122 61 22 chr20 66464727 66465088 -5688794 - THE1C LTR MaLR 0 375 1 308 250 34 45 chr20 66465182 66465270 -5688612 + MIR SINE MIR 17 103 -159 205 189 0 0 chr20 66465275 66465312 -5688570 + (TTCA)n Simple_repeat Simple_repeat 2 38 0 544 273 207 4 chr20 66465369 66465611 -5688271 + MER110 LTR ERV1 46 336 -155 1016 312 35 37 chr20 66465660 66465855 -5688027 - L2 LINE L2 -47 3266 3072 2343 107 3 0 chr20 66465855 66466165 -5687717 - AluSx SINE Alu -1 311 1 1016 312 35 37 chr20 66466165 66466554 -5687328 - L2 LINE L2 -241 3072 2686 375 221 29 58 chr20 66466572 66466601 -5687281 - MER58A DNA MER1_type -2197 223 195 2173 225 36 16 chr20 66466601 66467094 -5686788 + MLT1D LTR MaLR 1 503 -2 375 221 29 58 chr20 66467094 66467168 -5686714 - MER58A DNA MER1_type -2225 195 123 226 154 26 0 chr20 66467183 66467222 -5686660 - MER58A DNA MER1_type -184 40 1 199 284 0 123 chr20 66467222 66467305 -5686577 + MIR SINE MIR 126 183 -79 2138 138 3 3 chr20 66467305 66467617 -5686265 + AluSx SINE Alu 1 312 0 199 284 0 123 chr20 66467617 66467688 -5686194 + MIR SINE MIR 183 261 -1 345 172 53 52 chr20 66468681 66468786 -5685096 + MLT1H LTR MaLR 11 159 -390 297 193 11 80 chr20 66469008 66469096 -5684786 + MLT1H LTR MaLR 477 548 -1 274 257 128 0 chr20 66469426 66469535 -5684347 + MLT1L LTR MaLR 168 290 -325 508 183 176 139 chr20 66469624 66469753 -5684129 + MLT1E2 LTR MaLR 64 187 -439 2473 86 0 0 chr20 66469753 66470057 -5683825 + AluY SINE Alu 1 304 -7 508 183 176 139 chr20 66470057 66470266 -5683616 + MLT1E2 LTR MaLR 187 377 -249 244 336 106 9 chr20 66470740 66470853 -5683029 + MER5C DNA MER1_type 1 124 -200 246 149 0 149 chr20 66471007 66471094 -5682788 + MER5C DNA MER1_type 249 322 -2 228 229 30 67 chr20 66471494 66471593 -5682289 - MIR SINE MIR -24 184 84 579 261 123 40 chr20 66471661 66471720 -5682162 - MLT1J LTR MaLR -22 489 436 2310 88 3 17 chr20 66471720 66472060 -5681822 - AluSp SINE Alu 0 313 1 579 261 123 40 chr20 66472060 66472253 -5681629 - MLT1J LTR MaLR -75 436 216 326 287 131 44 chr20 66472367 66472757 -5681125 - MLT1H LTR MaLR -114 435 12 331 244 12 0 chr20 66472766 66472848 -5681034 - MLT1J LTR MaLR -327 184 102 2191 108 0 0 chr20 66473108 66473387 -5680495 - AluSg SINE Alu -17 293 15 1960 110 0 0 chr20 66473387 66473632 -5680250 - AluSx SINE Alu -67 245 1 545 234 52 36 chr20 66473765 66473957 -5679925 + Charlie8 DNA MER1_type 1 195 -2222 338 243 100 43 chr20 66474020 66474160 -5679722 + L2 LINE L2 3166 3313 0 266 282 122 58 chr20 66474510 66474666 -5679216 - L2 LINE L2 -494 2820 2655 512 242 17 0 chr20 66474839 66474959 -5678923 - MER20 DNA MER1_type -1 218 97 296 256 47 0 chr20 66475037 66475123 -5678759 - Charlie8 DNA MER1_type -2188 229 140 260 225 14 42 chr20 66476367 66476438 -5677444 - MER58A DNA MER1_type 0 224 156 * 351 263 11 11 chr20 66476422 66476517 -5677365 - MER81 DNA DNA -19 95 1 2653 52 0 0 chr20 66476533 66476841 -5677041 - AluY SINE Alu -3 308 1 710 170 6 94 chr20 66476851 66476944 -5676938 - MER58A DNA MER1_type -185 156 83 2455 79 0 0 chr20 66476944 66477248 -5676634 - AluY SINE Alu -7 304 1 710 170 6 94 chr20 66477248 66477325 -5676557 - MER58A DNA MER1_type -258 83 1 300 243 0 27 chr20 66477450 66477524 -5676358 + LTR16A1 LTR ERVL 61 132 -325 340 348 43 30 chr20 66477768 66477998 -5675884 + L2 LINE L2 3080 3312 -1 394 168 15 168 chr20 66478420 66478551 -5675331 + MER45A DNA AcHobo 65 175 -3 418 355 25 25 chr20 66478579 66478779 -5675103 - MIR SINE MIR -34 228 29 21 36 0 0 chr20 66479207 66479235 -5674647 + AT_rich Low_complexity Low_complexity 1 28 0 206 230 40 40 chr20 66479275 66479375 -5674507 + A-rich Low_complexity Low_complexity 5 104 0 1135 143 18 62 chr20 66479402 66479575 -5674307 + MLT1D LTR MaLR 1 163 -342 2038 140 3 7 chr20 66479575 66479875 -5674007 - AluSx SINE Alu -13 299 1 1135 143 18 62 chr20 66479875 66479925 -5673957 + MLT1D LTR MaLR 163 214 -291 234 36 0 0 chr20 66479943 66479971 -5673911 - MER58A DNA MER1_type -10 214 187 520 207 18 0 chr20 66479986 66480097 -5673785 - MER58A DNA MER1_type 0 113 1 1201 178 38 75 chr20 66480151 66480444 -5673438 + MLT1D LTR MaLR 223 504 -1 534 210 25 0 chr20 66480922 66481041 -5672841 - MER58A DNA MER1_type 0 122 1 2296 109 7 0 chr20 66481296 66481600 -5672282 + AluSx SINE Alu 1 306 -6 379 211 96 0 chr20 66482130 66482234 -5671648 + MIR SINE MIR 69 182 -80 349 185 25 0 chr20 66482246 66482327 -5671555 - MER53 DNA DNA -2 187 105 219 259 0 0 chr20 66482993 66483051 -5670831 + T-rich Low_complexity Low_complexity 4 61 0 579 269 64 51 chr20 66483079 66483391 -5670491 - HAL1 LINE L1 -5 2502 2187 1407 239 18 113 chr20 66483841 66484150 -5669732 - MER34 LTR ERV1 0 542 316 2363 88 10 3 chr20 66484150 66484455 -5669427 + AluSx SINE Alu 5 311 -1 1407 239 18 113 chr20 66484455 66484744 -5669138 - MER34 LTR ERV1 -226 316 1 2133 99 48 0 chr20 66484772 66485064 -5668818 + AluSx SINE Alu 6 311 -1 1455 104 0 30 chr20 66485074 66485276 -5668606 - AluSg/x SINE Alu -17 295 100 2083 116 4 0 chr20 66485291 66485559 -5668323 - AluSp SINE Alu -44 269 1 444 253 45 29 chr20 66485728 66485881 -5668001 - MIR SINE MIR -38 170 13 1879 202 49 39 chr20 66485915 66486297 -5667585 - MLT1D LTR MaLR -6 499 109 1986 118 65 0 chr20 66486297 66486576 -5667306 + AluSx SINE Alu 1 297 -15 1879 202 49 39 chr20 66486576 66486679 -5667203 - MLT1D LTR MaLR -396 109 9 361 364 45 19 chr20 66487073 66487227 -5666655 + MIR SINE MIR 91 248 -14 * 604 283 132 19 chr20 66487222 66487487 -5666395 + L2 LINE L2 2391 2685 -629 1593 144 0 81 chr20 66487490 66487838 -5666044 + MER33 DNA MER1_type 5 324 0 315 0 0 0 chr20 66488430 66488465 -5665417 + (TG)n Simple_repeat Simple_repeat 2 36 0 2094 94 3 35 chr20 66488543 66488831 -5665051 + AluSg SINE Alu 1 279 -31 26 50 0 0 chr20 66490556 66490596 -5663286 + GC_rich Low_complexity Low_complexity 1 40 0 24 32 0 0 chr20 66490959 66490990 -5662892 + GC_rich Low_complexity Low_complexity 1 31 0 200 167 93 37 chr20 66491502 66491556 -5662326 + L2 LINE L2 3257 3313 0 492 269 4 64 chr20 66491946 66492175 -5661707 - L1MC4a LINE L1 -307 5814 5644 348 292 192 27 chr20 66492829 66493048 -5660834 - L1MC4a LINE L1 -1690 6118 5864 331 298 61 17 chr20 66493195 66493376 -5660506 - L1MC4a LINE L1 -2199 5609 5421 2075 123 3 7 chr20 66493911 66494221 -5659661 - AluSx SINE Alu -3 309 1 729 158 38 49 chr20 66495642 66495826 -5658056 + MER53 DNA DNA 8 189 0 4390 123 6 2 chr20 66496093 66496725 -5657157 - MER41B LTR ERV1 0 635 1 359 274 82 15 chr20 66496779 66496914 -5656968 + MIR SINE MIR 65 208 -54 427 306 75 0 chr20 66497115 66497249 -5656633 + L2 LINE L2 2679 2822 -492 196 0 86 29 chr20 66497648 66497683 -5656199 + T-rich Low_complexity Low_complexity 2 38 0 438 74 0 0 chr20 66497685 66497739 -5656143 - AluJ/FRAM SINE Alu -30 282 229 1789 152 14 10 chr20 66497767 66498057 -5655825 + AluJb SINE Alu 1 291 -21 421 229 124 0 chr20 66498172 66498277 -5655605 - MIR SINE MIR -102 160 43 869 203 0 0 chr20 66498665 66498828 -5655054 - MER58B DNA MER1_type 0 341 179 2292 229 54 54 chr20 66498831 66499186 -5654696 + MER82 DNA MER2_type 1 358 -295 1930 159 7 16 chr20 66499186 66499495 -5654387 - AluJb SINE Alu -6 306 1 2292 229 54 54 chr20 66499495 66499786 -5654096 + MER82 DNA MER2_type 357 647 -6 901 193 12 0 chr20 66499793 66499964 -5653918 - MER58B DNA MER1_type -168 173 1 264 321 12 0 chr20 66500790 66500871 -5653011 - L2 LINE L2 0 3272 3191 1962 115 50 4 chr20 66500876 66501155 -5652727 + AluJb SINE Alu 1 292 -20 2082 119 3 7 chr20 66501640 66501972 -5651910 - AluSx SINE Alu 0 331 1 2360 78 10 7 chr20 66502427 66502735 -5651147 + AluY SINE Alu 1 309 -2 358 354 56 0 chr20 66502872 66503016 -5650866 + L1ME LINE L1 5486 5637 -484 2431 80 3 3 chr20 66503063 66503364 -5650518 + AluSp SINE Alu 1 301 -12 652 203 77 145 chr20 66503372 66503697 -5650185 + MER58B DNA MER1_type 39 341 0 234 150 0 0 chr20 66504448 66504488 -5649394 + (GGGA)n Simple_repeat Simple_repeat 3 42 0 1139 90 6 0 chr20 66504492 66504658 -5649224 + (GAAA)n Simple_repeat Simple_repeat 3 169 0 2234 107 27 0 chr20 66504659 66504958 -5648924 + AluSg SINE Alu 1 307 -3 903 133 11 22 chr20 66504963 66505143 -5648739 + GA-rich Low_complexity Low_complexity 3 180 0 1072 213 5 27 chr20 66505633 66505854 -5648028 - MER20 DNA MER1_type -1 218 3 864 106 0 0 chr20 66506466 66506579 -5647303 - AluSp SINE Alu -198 115 3 387 0 0 0 chr20 66506781 66506824 -5647058 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 473 286 71 36 chr20 66507386 66507638 -5646244 + MIR SINE MIR 1 261 -1 259 318 30 73 chr20 66507736 66507822 -5646060 + L1MC/D LINE L1 5311 5399 -2409 1847 138 0 47 chr20 66507822 66508142 -5645740 + AluJb SINE Alu 1 306 0 259 318 30 73 chr20 66508142 66508287 -5645595 + L1MC/D LINE L1 5399 5533 -2275 2005 91 60 4 chr20 66508398 66508663 -5645219 + AluSg SINE Alu 1 280 -30 486 329 75 8 chr20 66508836 66509076 -5644806 - MIR SINE MIR 0 262 7 440 273 119 22 chr20 66509178 66509405 -5644477 + L2 LINE L2 3065 3313 0 192 77 0 0 chr20 66509973 66509999 -5643883 + (A)n Simple_repeat Simple_repeat 1 26 0 288 210 100 50 chr20 66510752 66510852 -5643030 + MIR SINE MIR 50 154 -108 1036 118 0 0 chr20 66510902 66511038 -5642844 + AluSc SINE Alu 1 136 -173 2381 98 10 0 chr20 66511039 66511344 -5642538 + AluSx SINE Alu 1 308 -4 286 289 66 112 chr20 66511344 66511842 -5642040 - MLT1K LTR MaLR -67 521 47 716 322 92 49 chr20 66511858 66512426 -5641456 - L2 LINE L2 -8 3305 2763 1191 293 120 9 chr20 66512426 66512883 -5640999 + MLT1J LTR MaLR 1 508 -3 716 322 92 49 chr20 66512883 66513081 -5640801 - L2 LINE L2 -550 2763 2466 2078 94 0 4 chr20 66513081 66513356 -5640526 + AluY SINE Alu 38 311 0 716 322 92 49 chr20 66513356 66513381 -5640501 - L2 LINE L2 -847 2466 2444 384 224 133 10 chr20 66513526 66513624 -5640258 - L2 LINE L2 0 3313 3204 236 337 0 0 chr20 66513728 66513819 -5640063 + MIR SINE MIR 84 143 -65 979 269 95 0 chr20 66513835 66514118 -5639764 + MLT1A1 LTR MaLR 2 311 -54 2169 103 0 55 chr20 66514150 66514480 -5639402 - AluSx SINE Alu 0 312 1 381 136 15 0 chr20 66514480 66514546 -5639336 + MLT1A1 LTR MaLR 326 392 -4 337 121 0 17 chr20 66514814 66514872 -5639010 + MLT1K LTR MaLR 189 245 -343 357 271 146 21 chr20 66515628 66515772 -5638110 - MIR SINE MIR -6 256 95 839 191 0 48 chr20 66515905 66516073 -5637809 + AluJb SINE Alu 121 280 -32 1110 56 17 22 chr20 66516075 66516254 -5637628 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 307 104 45 9 chr20 66516254 66516365 -5637517 + GA-rich Low_complexity Low_complexity 1 115 0 1789 139 36 46 chr20 66517103 66517406 -5636476 - AluJb SINE Alu -12 300 1 813 191 71 6 chr20 66517458 66517641 -5636241 + MLT1D LTR MaLR 303 497 -8 1789 154 13 34 chr20 66518975 66519273 -5634609 + AluJo SINE Alu 1 292 -20 2255 125 0 6 chr20 66519280 66519591 -5634291 + AluSc SINE Alu 1 309 0 423 287 27 63 chr20 66520722 66520945 -5632937 - MIR SINE MIR -35 227 13 562 115 0 0 chr20 66521158 66521236 -5632646 - AluS SINE Alu -13 299 222 248 61 0 0 chr20 66521236 66521269 -5632613 - Alu SINE Alu -266 33 1 1351 188 34 62 chr20 66521603 66521692 -5632190 - Charlie5 DNA MER1_type -7 2617 2527 473 162 20 0 chr20 66521692 66521791 -5632091 - L1MB2 LINE L1 -3 6168 6068 1351 188 34 62 chr20 66521791 66522089 -5631793 - Charlie5 DNA MER1_type -97 2527 2241 452 209 0 115 chr20 66522095 66522130 -5631752 - MER3 DNA MER1_type 6 168 131 2358 89 0 0 chr20 66522130 66522441 -5631441 + AluSq SINE Alu 1 313 0 452 209 0 115 chr20 66522441 66522544 -5631338 - MER3 DNA MER1_type -31 131 46 2078 138 10 0 chr20 66523914 66524205 -5629677 + AluSx SINE Alu 2 295 -17 456 230 26 9 chr20 66524271 66524384 -5629498 - MIR SINE MIR -60 202 88 221 136 0 23 chr20 66524439 66524483 -5629399 + (TTCC)n Simple_repeat Simple_repeat 2 44 0 190 340 0 0 chr20 66524663 66524716 -5629166 - L2 LINE L2 -4 3268 3216 1035 217 14 0 chr20 66524726 66524938 -5628944 - MER20 DNA MER1_type -4 215 1 526 292 79 40 chr20 66525021 66525350 -5628532 - L1MC4a LINE L1 -329 5792 5491 2045 120 40 3 chr20 66525976 66526275 -5627607 + AluSx SINE Alu 1 310 -2 1424 186 107 0 chr20 66526617 66526880 -5627002 + AluJo SINE Alu 3 293 -19 1231 296 10 13 chr20 66526976 66527371 -5626511 - L1MC4a LINE L1 -1875 5933 5540 1875 225 18 20 chr20 66527918 66528430 -5625452 + MLT1F LTR MaLR 15 542 0 188 269 128 0 chr20 66528642 66528720 -5625162 + MIR SINE MIR 65 152 -110 419 336 31 0 chr20 66528818 66528946 -5624936 - L2 LINE L2 0 3272 3141 269 295 98 88 chr20 66529271 66529576 -5624306 + L2 LINE L2 2900 3207 -106 925 132 0 56 chr20 66529599 66529743 -5624139 - AluSq/x SINE Alu -177 136 1 231 270 184 10 chr20 66529743 66529872 -5624010 + MIR3 SINE MIR 20 170 -38 1557 134 94 7 chr20 66529900 66530198 -5623684 - MER33 DNA MER1_type 0 324 1 2217 123 3 3 chr20 66530611 66530919 -5622963 - AluSx SINE Alu -4 308 1 528 269 109 94 chr20 66531367 66531836 -5622046 + MLT1K LTR MaLR 1 476 0 286 366 52 33 chr20 66531858 66532011 -5621871 - MIR3 SINE MIR -49 159 4 1496 224 91 36 chr20 66532019 66532493 -5621389 - MLT1D LTR MaLR 0 505 6 492 211 78 66 chr20 66532871 66533037 -5620845 + MIR SINE MIR 35 202 -60 200 280 65 28 chr20 66533849 66533956 -5619926 - MIR SINE MIR -34 228 118 275 157 79 11 chr20 66534100 66534189 -5619693 - L1ME4a LINE L1 0 6121 6027 2378 82 3 3 chr20 66534273 66534576 -5619306 - AluSp SINE Alu -10 303 1 341 253 117 51 chr20 66534621 66534738 -5619144 - L1ME LINE L1 -368 5753 5645 1958 133 29 29 chr20 66534738 66535046 -5618836 - AluJo SINE Alu -4 308 1 341 253 117 51 chr20 66535046 66535201 -5618681 - L1ME LINE L1 -476 5645 5463 2135 125 3 10 chr20 66535511 66535816 -5618066 - AluJb SINE Alu -9 303 1 185 246 115 16 chr20 66535961 66536022 -5617860 + MIR SINE MIR 159 225 -37 336 243 0 54 chr20 66536313 66536424 -5617458 - L2 LINE L2 -21 3292 3188 192 329 57 14 chr20 66537540 66537610 -5616272 - MIR SINE MIR -162 100 28 1936 145 33 0 chr20 66537619 66537926 -5615956 - AluSx SINE Alu 0 316 1 180 186 0 47 chr20 66538418 66538461 -5615421 + MIR SINE MIR 83 123 -139 219 312 140 5 chr20 66539320 66539513 -5614369 - MIR SINE MIR -48 214 5 2299 112 0 0 chr20 66540746 66541049 -5612833 - AluSc SINE Alu -6 303 1 238 301 0 60 chr20 66541119 66541302 -5612580 + GA-rich Low_complexity Low_complexity 1 172 0 252 286 5 49 chr20 66541362 66541547 -5612335 + GA-rich Low_complexity Low_complexity 1 177 0 368 271 71 14 chr20 66541720 66541860 -5612022 + L2 LINE L2 3122 3269 -3 247 319 60 17 chr20 66542303 66542419 -5611463 - L2 LINE L2 -15 3257 3137 200 192 19 19 chr20 66542544 66542596 -5611286 - L2 LINE L2 -339 2975 2924 189 200 0 44 chr20 66543524 66543569 -5610313 - MIR SINE MIR -117 145 103 1493 141 39 56 chr20 66544091 66544375 -5609507 + AluJo SINE Alu 1 279 -33 321 303 111 59 chr20 66544415 66544897 -5608985 - L2 LINE L2 -9 3263 2706 2325 107 0 0 chr20 66544901 66545210 -5608672 - AluY SINE Alu -2 309 1 493 222 56 0 chr20 66545234 66545360 -5608522 - MER58B DNA MER1_type -5 336 204 601 193 61 0 chr20 66545492 66545606 -5608276 + MER46A DNA MER2_type 1 121 -115 240 35 0 0 chr20 66545606 66545635 -5608247 + (TG)n Simple_repeat Simple_repeat 2 30 0 731 194 30 22 chr20 66545636 66545770 -5608112 - AluJo SINE Alu -176 136 2 539 219 8 8 chr20 66545772 66545900 -5607982 + MER46A DNA MER2_type 109 236 0 740 271 152 15 chr20 66545904 66546247 -5607635 - L2 LINE L2 -36 3277 2888 2217 126 10 0 chr20 66546986 66547295 -5606587 - AluSx SINE Alu 0 312 1 713 223 119 11 chr20 66547295 66547555 -5606327 + LTR37A LTR ERV1 139 426 0 528 249 78 57 chr20 66547555 66547748 -5606134 - MIR SINE MIR -59 203 7 1916 136 4 4 chr20 66548068 66548348 -5605534 + AluJb SINE Alu 14 293 -19 594 315 51 0 chr20 66548714 66548911 -5604971 - MIR SINE MIR -6 256 50 2046 210 73 20 chr20 66549082 66549591 -5604291 + MLT1F LTR MaLR 5 540 -2 781 303 23 24 chr20 66549595 66550083 -5603799 + MLT1F-int LTR MaLR 4 611 -760 262 341 16 16 chr20 66550262 66550385 -5603497 + MLT1F-int LTR MaLR 756 878 -493 1811 256 96 20 chr20 66551917 66552574 -5601308 + L1ME3A LINE L1 5430 6136 -34 763 300 32 32 chr20 66552586 66552996 -5600886 - L1MC4a LINE L1 -1954 5854 5445 21 36 0 0 chr20 66552996 66553024 -5600858 + AT_rich Low_complexity Low_complexity 1 28 0 324 300 63 32 chr20 66553225 66553411 -5600471 + MIR SINE MIR 32 226 -36 2072 130 0 7 chr20 66554335 66554636 -5599246 + AluSx SINE Alu 1 299 -13 456 317 33 34 chr20 66555012 66555224 -5598658 - MIR SINE MIR -28 234 28 1042 164 26 78 chr20 66555224 66555455 -5598427 - MER20 DNA MER1_type 0 219 1 456 317 33 34 chr20 66555455 66555479 -5598403 - MIR SINE MIR -234 28 5 342 162 10 121 chr20 66555813 66555912 -5597970 + Charlie8 DNA MER1_type 74 161 -2256 185 292 92 62 chr20 66556155 66556285 -5597597 - L2 LINE L2 -186 3086 2953 233 290 14 14 chr20 66556399 66556468 -5597414 + MIR SINE MIR 111 179 -83 199 91 0 0 chr20 66557334 66557367 -5596515 + (TTTTG)n Simple_repeat Simple_repeat 3 140 0 2021 113 40 0 chr20 66557367 66557642 -5596240 - AluSq SINE Alu -1 320 3 2401 98 0 0 chr20 66557681 66557988 -5595894 - AluSq SINE Alu -6 307 1 2306 73 0 18 chr20 66558053 66558362 -5595520 + AluY SINE Alu 1 304 0 1868 226 81 17 chr20 66558528 66559011 -5594871 - LTR40a LTR ERVL -5 514 1 576 249 69 41 chr20 66559089 66559295 -5594587 - MIR SINE MIR -24 238 19 620 271 130 6 chr20 66559884 66560061 -5593821 + MIR SINE MIR 3 201 -61 440 205 118 31 chr20 66560069 66560196 -5593686 - L2 LINE L2 0 3313 3176 394 276 100 13 chr20 66561577 66561816 -5592066 + MIR SINE MIR 3 262 0 977 186 46 42 chr20 66561876 66562113 -5591769 - MIR SINE MIR 0 262 25 194 337 12 24 chr20 66562488 66562571 -5591311 - L2 LINE L2 -508 2806 2725 256 115 26 90 chr20 66562589 66562603 -5591279 + L1PB2 LINE L1 6077 6090 -61 1826 168 0 16 chr20 66562603 66562912 -5590970 + AluJo SINE Alu 1 304 -8 256 115 26 90 chr20 66562912 66562975 -5590907 + L1PB2 LINE L1 6090 6149 -2 701 176 131 35 chr20 66563355 66563554 -5590328 + MER20 DNA MER1_type 1 218 -1 815 284 79 53 chr20 66563603 66564058 -5589824 - LTR67 LTR ERVL -55 502 36 294 285 69 8 chr20 66564192 66564322 -5589560 - MER113 DNA MER1_type? -190 331 194 * 341 301 26 28 chr20 66564285 66564517 -5589365 - MER106B DNA MER1_type -11 1048 1 391 333 29 29 chr20 66564535 66564709 -5589173 + MER5A DNA MER1_type 10 183 -6 1578 187 3 3 chr20 66564720 66565003 -5588879 + AluJo SINE Alu 1 283 -29 271 250 42 42 chr20 66565006 66565102 -5588780 - MER5B DNA MER1_type -2 176 81 254 309 81 8 chr20 66565133 66565256 -5588626 + MIR SINE MIR 14 145 -117 456 230 23 0 chr20 66565418 66565505 -5588377 - MER5A DNA MER1_type -83 106 18 1091 193 24 5 chr20 66565520 66565733 -5588149 - MER20 DNA MER1_type 0 219 3 647 300 89 13 chr20 66566520 66566757 -5587125 - MIR SINE MIR 0 262 8 328 225 56 0 chr20 66566805 66566894 -5586988 + MER5A DNA MER1_type 22 115 -74 1908 141 0 42 chr20 66567060 66567372 -5586510 + AluJo SINE Alu 1 299 -13 204 350 0 0 chr20 66568034 66568094 -5585788 + MIR SINE MIR 93 152 -56 937 271 89 32 chr20 66568949 66569301 -5584581 + L2 LINE L2 2706 3098 -215 2251 100 7 23 chr20 66569301 66569600 -5584282 + AluSq SINE Alu 1 294 -19 937 271 89 32 chr20 66569600 66569829 -5584053 + L2 LINE L2 3098 3313 0 271 309 55 0 chr20 66570038 66570148 -5583734 + L2 LINE L2 3185 3300 -13 202 338 40 0 chr20 66570162 66570236 -5583646 - MIR SINE MIR -65 197 121 808 278 15 39 chr20 66570859 66571190 -5582692 - MLT2C1 LTR ERVL 0 397 75 411 260 138 45 chr20 66571210 66571368 -5582514 + L2 LINE L2 2991 3182 -131 2111 81 26 4 chr20 66571368 66571669 -5582213 - AluSc SINE Alu 0 307 1 411 260 138 45 chr20 66571669 66571755 -5582127 + L2 LINE L2 3182 3259 -54 1174 179 0 45 chr20 66571762 66571985 -5581897 + AluJb SINE Alu 86 298 -14 1819 129 107 4 chr20 66572771 66573051 -5580831 + AluSx SINE Alu 1 309 -3 417 289 11 83 chr20 66573966 66574098 -5579784 + MIR SINE MIR 15 132 -130 2486 66 26 7 chr20 66574098 66574402 -5579480 - AluSg SINE Alu 0 310 1 417 289 11 83 chr20 66574402 66574449 -5579433 + MIR SINE MIR 132 181 -81 264 260 41 48 chr20 66575117 66575263 -5578619 + L2 LINE L2 2662 2806 -508 462 305 115 15 chr20 66575570 66575770 -5578112 + MIR SINE MIR 35 254 -8 396 202 3 46 chr20 66575789 66575945 -5577937 - L1ME4a LINE L1 -3 6072 1195 1773 262 14 12 chr20 66576015 66576507 -5577375 - L1MB7 LINE L1 -13 6171 5679 264 59 0 0 chr20 66577169 66577203 -5576679 + (TG)n Simple_repeat Simple_repeat 2 35 0 2309 99 0 29 chr20 66577255 66577568 -5576314 + AluSx SINE Alu 1 304 -8 1563 189 122 6 chr20 66577572 66577884 -5575998 - MER7A DNA MER2_type 0 346 1 621 237 62 6 chr20 66578134 66578311 -5575571 - MIR SINE MIR -72 190 4 662 34 23 0 chr20 66579701 66579789 -5574093 + (TCTA)n Simple_repeat Simple_repeat 4 93 0 1999 146 3 0 chr20 66579790 66580077 -5573805 - AluJb SINE Alu -24 288 1 509 228 87 63 chr20 66580296 66580502 -5573380 - MIR SINE MIR -21 241 31 484 278 63 0 chr20 66580569 66580695 -5573187 - L2 LINE L2 -5 3267 3134 1349 242 86 12 chr20 66580708 66581138 -5572744 + MLT1C LTR MaLR 6 467 0 2409 97 3 0 chr20 66581328 66581713 -5572169 - AluSx SINE Alu 0 386 1 33 66 0 0 chr20 66581777 66581838 -5572044 + AT_rich Low_complexity Low_complexity 1 61 0 1172 173 26 0 chr20 66581838 66582066 -5571816 - MER33 DNA MER1_type -259 65 1 1657 194 11 0 chr20 66582119 66582403 -5571479 + AluJo SINE Alu 1 287 -25 323 224 0 0 chr20 66582404 66582471 -5571411 - MIR SINE MIR -1 261 195 458 235 64 148 chr20 66583142 66583327 -5570555 + L2 LINE L2 2988 3138 -134 1548 205 36 27 chr20 66583327 66583663 -5570219 - MER58B DNA MER1_type 0 341 3 458 235 64 148 chr20 66583663 66583788 -5570094 + L2 LINE L2 3138 3272 0 715 181 12 82 chr20 66584454 66584557 -5569325 - MER20 DNA MER1_type -45 174 86 2287 100 0 7 chr20 66584557 66584858 -5569024 - AluSx SINE Alu -13 299 1 715 181 12 82 chr20 66584858 66584925 -5568957 - MER20 DNA MER1_type -133 86 16 426 196 0 59 chr20 66585345 66585447 -5568435 + MIR SINE MIR 116 211 -51 210 37 0 0 chr20 66586480 66586507 -5567375 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 333 326 155 12 chr20 66586507 66586752 -5567130 - L2 LINE L2 -13 3300 3021 465 284 32 32 chr20 66587205 66587395 -5566487 - MIR SINE MIR -52 210 21 805 233 60 19 chr20 66588350 66588565 -5565317 - MER58A DNA MER1_type 0 224 1 1523 209 73 38 chr20 66588750 66589199 -5564683 + MLT1C LTR MaLR 1 465 -2 299 165 72 41 chr20 66590066 66590163 -5563719 - LTR67 LTR ERVL -9 548 449 2220 103 30 0 chr20 66591688 66591989 -5561893 - AluY SINE Alu -1 310 1 307 325 31 38 chr20 66592100 66592228 -5561654 + L1ME4a LINE L1 5952 6080 -41 833 245 10 5 chr20 66592228 66592436 -5561446 - MER3 DNA MER1_type 0 209 1 307 325 31 38 chr20 66592436 66592467 -5561415 + L1ME4a LINE L1 6080 6110 -11 637 261 80 16 chr20 66592753 66593002 -5560880 - MLT1L LTR MaLR -349 266 2 216 200 0 0 chr20 66593925 66593970 -5559912 + (TCCA)n Simple_repeat Simple_repeat 1 45 0 281 286 14 0 chr20 66594132 66594202 -5559680 - L2 LINE L2 -2 3270 3200 276 30 0 0 chr20 66594359 66594392 -5559490 + (GA)n Simple_repeat Simple_repeat 2 34 0 377 342 65 15 chr20 66594802 66595062 -5558820 - L2 LINE L2 -337 2977 2705 610 102 0 163 chr20 66595573 66595720 -5558162 - MLT1C LTR MaLR -344 123 1 2952 165 47 11 chr20 66595772 66596299 -5557583 - MER44D DNA MER2_type -2 603 3 227 308 192 8 chr20 66596306 66596426 -5557456 - MIR SINE MIR -70 192 51 * 513 244 19 45 chr20 66596423 66596579 -5557303 + MIR SINE MIR 107 258 -4 351 244 0 12 chr20 66596698 66596784 -5557098 + Charlie8 DNA MER1_type 83 167 -2250 1126 76 0 27 chr20 66597129 66597314 -5556568 + (TG)n Simple_repeat Simple_repeat 1 180 0 1066 88 6 22 chr20 66597342 66597524 -5556358 + (TG)n Simple_repeat Simple_repeat 2 180 0 209 371 29 0 chr20 66597765 66597870 -5556012 - MIR3 SINE MIR -6 202 95 302 327 88 9 chr20 66598000 66598113 -5555769 + MIR SINE MIR 31 152 -110 342 188 16 16 chr20 66598257 66598321 -5555561 - L2 LINE L2 -9 3263 3200 918 183 8 81 chr20 66598469 66598704 -5555178 + MER20 DNA MER1_type 2 219 0 204 250 167 31 chr20 66599435 66599531 -5554351 - L2 LINE L2 -2 3270 3162 1553 221 79 84 chr20 66599640 66600200 -5553682 + MLT1E LTR MaLR 1 557 -36 301 264 28 0 chr20 66600209 66600281 -5553601 + L2 LINE L2 3199 3272 0 218 385 62 0 chr20 66600289 66600385 -5553497 - L2 LINE L2 -38 3234 3133 512 316 70 14 chr20 66600681 66600896 -5552986 + MIR SINE MIR 23 249 -13 239 345 45 9 chr20 66600980 66601090 -5552792 - HAL1 LINE L1 -2393 114 1 695 338 98 49 chr20 66601106 66601925 -5551957 + L2 LINE L2 2040 2898 -416 274 281 87 111 chr20 66601952 66602111 -5551771 + L2 LINE L2 2977 3129 -143 5569 57 15 16 chr20 66602111 66602837 -5551045 - L1PA6 LINE L1 -1 6153 5429 274 281 87 111 chr20 66602837 66602930 -5550952 + L2 LINE L2 3129 3223 -49 938 202 43 14 chr20 66603380 66603588 -5550294 - MER20 DNA MER1_type -3 216 3 418 269 173 6 chr20 66603620 66603776 -5550106 - L2 LINE L2 0 3313 3132 253 269 183 0 chr20 66603803 66603896 -5549986 + L2 LINE L2 3161 3270 -2 381 286 57 34 chr20 66603926 66604101 -5549781 - L2 LINE L2 -231 3082 2904 290 290 116 79 chr20 66604113 66604416 -5549466 + L2 LINE L2 2959 3272 0 999 96 27 9 chr20 66604421 66604753 -5549129 + (TGGA)n Simple_repeat Simple_repeat 4 339 0 459 0 0 0 chr20 66605052 66605103 -5548779 + (TG)n Simple_repeat Simple_repeat 2 52 0 332 297 66 28 chr20 66605360 66605535 -5548347 + MIR SINE MIR 17 195 -65 964 167 16 27 chr20 66605716 66605902 -5547980 + MER5A DNA MER1_type 6 189 0 191 370 54 0 chr20 66605902 66605994 -5547888 - L2 LINE L2 -547 2767 2671 394 143 24 12 chr20 66606048 66606132 -5547750 - MER53 DNA DNA 0 189 105 420 312 0 43 chr20 66606852 66606993 -5546889 + MIR SINE MIR 58 192 -70 299 326 45 25 chr20 66607848 66608090 -5545792 - L1ME4a LINE L1 -235 5886 5640 534 276 77 6 chr20 66608898 66609068 -5544814 + MIR SINE MIR 53 234 -28 324 246 82 25 chr20 66609070 66609192 -5544690 + L2 LINE L2 3176 3304 -9 347 254 9 53 chr20 66609382 66609496 -5544386 - L2 LINE L2 -1 3312 3204 21 36 0 0 chr20 66610046 66610074 -5543808 + AT_rich Low_complexity Low_complexity 1 28 0 599 228 61 44 chr20 66610765 66610841 -5543041 + MER5A DNA MER1_type 1 74 -115 2286 8 0 0 chr20 66610841 66611107 -5542775 + L1PA3 LINE L1 5890 6155 0 599 228 61 44 chr20 66611107 66611210 -5542672 + MER5A DNA MER1_type 74 183 -6 311 183 106 96 chr20 66611327 66611431 -5542451 + MER5A DNA MER1_type 41 145 -44 353 100 0 17 chr20 66611463 66611523 -5542359 + (TTTC)n Simple_repeat Simple_repeat 2 60 0 1900 155 0 52 chr20 66611526 66611855 -5542027 - AluJb SINE Alu 0 312 1 310 200 31 0 chr20 66611856 66611921 -5541961 - MER5A DNA MER1_type -114 75 9 416 273 2 7 chr20 66612031 66612173 -5541709 + MIR SINE MIR 42 182 -63 893 271 105 43 chr20 66612997 66613443 -5540439 - L2 LINE L2 -10 3303 2830 811 204 50 11 chr20 66613462 66613643 -5540239 + MER20 DNA MER1_type 32 219 0 394 301 87 5 chr20 66613666 66613885 -5539997 - L2 LINE L2 -513 2801 2565 555 214 83 42 chr20 66615100 66615268 -5538614 + MER53 DNA DNA 15 189 0 433 271 8 8 chr20 66615422 66615544 -5538338 + MIR SINE MIR 34 155 -107 1141 214 17 17 chr20 66615549 66615783 -5538099 + Tigger7 DNA MER2_type 1 234 -471 573 157 49 10 chr20 66615784 66615886 -5537996 + Tigger7 DNA MER2_type 2386 2491 0 249 266 32 43 chr20 66615890 66615984 -5537898 + MIR SINE MIR 164 256 -6 886 202 29 6 chr20 66616100 66616273 -5537609 + FRAM SINE Alu 1 174 -2 1311 189 16 101 chr20 66616640 66617070 -5536812 - Tigger3(Golem) DNA MER2_type 0 3038 1 827 192 42 36 chr20 66617475 66617668 -5536214 - MER3 DNA MER1_type -5 204 11 392 184 6 35 chr20 66618011 66618185 -5535697 + (TA)n Simple_repeat Simple_repeat 2 170 0 777 262 44 62 chr20 66618338 66618613 -5535269 - MLT1J LTR MaLR -7 504 235 208 244 0 0 chr20 66618757 66618798 -5535084 + GA-rich Low_complexity Low_complexity 1 41 0 433 275 82 43 chr20 66618942 66619066 -5534816 - Charlie8 DNA MER1_type -2136 281 163 204 67 0 0 chr20 66619066 66619096 -5534786 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 433 275 82 43 chr20 66619096 66619204 -5534678 - Charlie8 DNA MER1_type -2254 163 40 349 130 0 0 chr20 66620103 66620157 -5533725 + MER81 DNA DNA 5 58 -56 1027 58 0 0 chr20 66620159 66620279 -5533603 - AluSg/x SINE Alu -11 301 182 261 303 24 36 chr20 66620936 66621101 -5532781 + L1ME4a LINE L1 5863 6025 -96 180 0 0 0 chr20 66621646 66621666 -5532216 + (T)n Simple_repeat Simple_repeat 1 20 0 223 319 109 14 chr20 66621697 66621835 -5532047 - MIR SINE MIR -71 191 41 244 111 0 0 chr20 66622073 66622109 -5531773 - Tigger1 DNA MER2_type -1064 1354 1319 14099 133 24 22 chr20 66622218 66622407 -5531475 - Tigger1 DNA MER2_type -1 2417 2230 1855 153 29 19 chr20 66622407 66622715 -5531167 - AluSx SINE Alu -1 311 1 14099 133 24 22 chr20 66622715 66623114 -5530768 - Tigger1 DNA MER2_type -188 2230 1833 2077 131 3 23 chr20 66623114 66623420 -5530462 - AluSx SINE Alu -12 300 1 14099 133 24 22 chr20 66623420 66624797 -5529085 - Tigger1 DNA MER2_type -585 1833 444 1708 153 0 35 chr20 66624797 66625079 -5528803 + AluJo SINE Alu 36 307 -5 14099 133 24 22 chr20 66625079 66625524 -5528358 - Tigger1 DNA MER2_type -1974 444 1 567 178 0 0 chr20 66625676 66625804 -5528078 - AluSg/x SINE Alu 0 321 194 486 244 24 16 chr20 66626487 66626614 -5527268 + MER5B DNA MER1_type 48 175 -3 710 188 156 0 chr20 66627244 66627398 -5526484 + MER45A DNA AcHobo 1 178 0 2496 167 121 35 chr20 66627640 66628358 -5525524 - LTR1B LTR ERV1 0 785 1 232 303 96 50 chr20 66628646 66628716 -5525166 - L2 LINE L2 -664 2650 2585 962 206 23 5 chr20 66628716 66628930 -5524952 - MER20 DNA MER1_type -1 218 1 232 303 96 50 chr20 66628930 66629077 -5524805 - L2 LINE L2 -729 2585 2423 384 179 13 0 chr20 66629287 66629365 -5524517 - MER53 DNA DNA 0 189 111 324 130 101 0 chr20 66629441 66629510 -5524372 + MER53 DNA DNA 93 168 -21 269 123 18 35 chr20 66629465 66629522 -5524360 - MER53 DNA DNA -112 77 22 * 1505 214 4 7 chr20 66629557 66629838 -5524044 - AluJb SINE Alu -32 280 1 1242 268 99 25 chr20 66629898 66630413 -5523469 + MLT1L LTR MaLR 62 614 -1 1087 209 79 4 chr20 66630604 66630858 -5523024 + LTR40a LTR ERVL 3 275 -244 355 113 28 0 chr20 66631263 66631334 -5522548 + GA-rich Low_complexity Low_complexity 2 74 0 2143 174 61 0 chr20 66632244 66632636 -5521246 + MSTA LTR MaLR 1 416 -12 266 243 27 0 chr20 66632716 66632790 -5521092 + MIR SINE MIR 77 152 -110 1635 221 129 11 chr20 66632791 66632832 -5521050 - MLT2B1 LTR ERVL 0 520 485 246 62 0 0 chr20 66632832 66632864 -5521018 + (TA)n Simple_repeat Simple_repeat 2 33 0 1635 221 129 11 chr20 66632864 66633279 -5520603 - MLT2B1 LTR ERVL -35 485 10 301 196 134 21 chr20 66633795 66633892 -5519990 - LTR67 LTR ERVL -10 547 440 202 190 155 0 chr20 66634436 66634494 -5519388 - L2 LINE L2 -188 3084 3018 220 234 0 0 chr20 66636836 66636883 -5516999 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 307 214 22 0 chr20 66636974 66637063 -5516819 + CT-rich Low_complexity Low_complexity 1 91 0 484 272 57 19 chr20 66637085 66637243 -5516639 - MIR SINE MIR -55 207 44 367 247 0 0 chr20 66637352 66637437 -5516445 + MER5A DNA MER1_type 25 109 -80 239 250 28 0 chr20 66638221 66638293 -5515589 + MIR SINE MIR 72 145 -117 478 321 95 40 chr20 66638364 66638691 -5515191 + L1ME3 LINE L1 5811 6155 -7 244 240 0 0 chr20 66638883 66638933 -5514949 + MIR SINE MIR 184 233 -29 293 241 115 0 chr20 66638953 66639040 -5514842 - MIR SINE MIR -71 191 95 1570 223 82 7 chr20 66639040 66639467 -5514415 - MLT1C LTR MaLR -3 464 6 1248 223 13 20 chr20 66640245 66640545 -5513337 + MLT1C LTR MaLR 59 356 -111 457 229 187 14 chr20 66640594 66640808 -5513074 - L2 LINE L2 -1025 2289 2039 258 250 0 17 chr20 66641082 66641142 -5512740 + MLT1K LTR MaLR 201 259 -329 593 327 67 17 chr20 66642326 66642810 -5511072 - L2 LINE L2 -80 3233 2720 8111 199 30 13 chr20 66642862 66644947 -5508935 - L1M3 LINE L1 -658 5513 3394 220 292 29 66 chr20 66645010 66645147 -5508735 - MER5B DNA MER1_type -20 158 27 608 225 8 8 chr20 66645793 66645922 -5507960 + L2 LINE L2 3138 3266 -6 282 287 35 0 chr20 66646042 66646129 -5507753 + MIR SINE MIR 103 192 -70 287 261 217 50 chr20 66646579 66646740 -5507142 + L2 LINE L2 2891 3078 -194 238 292 71 18 chr20 66646845 66646958 -5506924 + MIR SINE MIR 27 145 -117 198 316 0 0 chr20 66647798 66647855 -5506027 - L2 LINE L2 -54 3218 3162 209 284 113 0 chr20 66648053 66648247 -5505635 - L2 LINE L2 -359 2955 2740 333 323 0 15 chr20 66648348 66648481 -5505401 + (TG)n Simple_repeat Simple_repeat 2 132 0 849 246 0 0 chr20 66648498 66648840 -5505042 + (TG)n Simple_repeat Simple_repeat 1 342 0 549 337 76 3 chr20 66648894 66649185 -5504697 - L1MC4 LINE L1 -184 7858 7547 939 184 215 36 chr20 66649296 66649654 -5504228 + MLT1D LTR MaLR 12 433 -72 25 31 0 0 chr20 66650738 66650770 -5503112 + AT_rich Low_complexity Low_complexity 1 32 0 563 301 104 6 chr20 66651194 66651580 -5502302 - MLT1L LTR MaLR -10 605 151 782 228 34 15 chr20 66651930 66652136 -5501746 + MER20 DNA MER1_type 5 214 -5 228 267 100 0 chr20 66652394 66652484 -5501398 + L2 LINE L2 2966 3064 -208 22 70 0 0 chr20 66652794 66652837 -5501045 + AT_rich Low_complexity Low_complexity 1 43 0 600 307 134 22 chr20 66652991 66653406 -5500476 - MLT1L LTR MaLR -6 609 148 246 167 56 0 chr20 66653406 66653460 -5500422 + MER58B DNA MER1_type 1 57 -284 421 224 250 0 chr20 66653460 66653576 -5500306 + MER58B DNA MER1_type 194 338 -3 407 294 66 12 chr20 66653668 66653839 -5500043 + MIR SINE MIR 34 219 -43 21 36 0 0 chr20 66654331 66654359 -5499523 + AT_rich Low_complexity Low_complexity 1 28 0 630 251 34 76 chr20 66654419 66654682 -5499200 + MIR SINE MIR 10 261 -1 387 257 57 0 chr20 66654705 66654810 -5499072 - MIR SINE MIR -88 174 64 1965 189 45 42 chr20 66655527 66655998 -5497884 + MLT1D LTR MaLR 34 505 0 243 238 17 0 chr20 66656087 66656259 -5497623 + (CA)n Simple_repeat Simple_repeat 1 175 0 273 273 20 0 chr20 66656261 66656360 -5497522 + (CCCA)n Simple_repeat Simple_repeat 2 102 0 414 198 19 0 chr20 66656362 66656524 -5497358 + (CA)n Simple_repeat Simple_repeat 1 165 0 237 98 0 0 chr20 66656919 66656960 -5496922 + (TTCA)n Simple_repeat Simple_repeat 2 42 0 246 247 43 75 chr20 66656966 66657059 -5496823 - L2 LINE L2 -10 3262 3173 423 311 0 0 chr20 66657672 66657839 -5496043 + (CA)n Simple_repeat Simple_repeat 1 167 0 602 264 67 21 chr20 66658741 66658934 -5494948 - MIR SINE MIR -29 233 32 181 206 95 48 chr20 66660144 66660207 -5493675 - L2 LINE L2 0 3313 3248 438 282 141 29 chr20 66660264 66660336 -5493546 + MIR SINE MIR 10 73 -189 973 267 51 31 chr20 66660336 66660725 -5493157 + MLT2C1 LTR ERVL 1 397 0 438 282 141 29 chr20 66660725 66660858 -5493024 + MIR SINE MIR 73 238 -24 * 481 320 76 0 chr20 66660839 66661011 -5492871 + L2 LINE L2 2897 3081 -191 2325 125 0 0 chr20 66661219 66661531 -5492351 - AluSq SINE Alu -1 312 1 422 286 43 1 chr20 66661531 66661690 -5492192 - MER106B DNA MER1_type -36 1023 35 189 297 54 0 chr20 66661874 66661948 -5491934 + L2 LINE L2 3183 3260 -12 794 149 42 12 chr20 66662316 66662484 -5491398 - MER53 DNA DNA -1 188 16 494 189 0 0 chr20 66662485 66662580 -5491302 - MER53 DNA DNA -94 95 1 485 251 25 49 chr20 66662580 66662722 -5491160 - MER45A DNA AcHobo -37 141 4 2558 74 0 0 chr20 66663351 66663650 -5490232 - AluY SINE Alu -12 299 1 3266 196 22 28 chr20 66663711 66664328 -5489554 + L1MB5 LINE L1 5254 5867 -307 2396 110 3 0 chr20 66664328 66664636 -5489246 + AluSx SINE Alu 1 309 -3 3266 196 22 28 chr20 66664636 66664757 -5489125 + L1MB5 LINE L1 5867 5987 -187 338 197 14 14 chr20 66664830 66664901 -5488981 + MIR SINE MIR 75 145 -63 1912 162 84 2 chr20 66665570 66665964 -5487918 - MSTB LTR MaLR 0 426 1 307 321 0 28 chr20 66665964 66666070 -5487812 - MLT1K LTR MaLR -26 562 460 2460 89 0 3 chr20 66666615 66666919 -5486963 + AluSq SINE Alu 1 303 -10 361 238 0 0 chr20 66666921 66667001 -5486881 - L1MB7 LINE L1 -22 6162 6083 251 288 0 0 chr20 66667120 66667186 -5486696 - MIR SINE MIR -67 141 76 331 308 49 28 chr20 66667288 66667431 -5486451 + MLT1I LTR MaLR 190 335 -74 330 253 24 0 chr20 66667480 66667563 -5486319 + MLT1I LTR MaLR 325 409 0 1571 239 63 9 chr20 66667895 66668321 -5485561 + MLT1E3 LTR MaLR 176 624 0 1991 133 18 0 chr20 66668940 66669065 -5484817 + AluSx SINE Alu 1 122 -190 276 30 0 0 chr20 66669065 66669098 -5484784 + (CA)n Simple_repeat Simple_repeat 2 34 0 1991 133 18 0 chr20 66669098 66669258 -5484624 + AluSx SINE Alu 122 291 -21 180 0 0 0 chr20 66669258 66669278 -5484604 + (TA)n Simple_repeat Simple_repeat 2 21 0 435 266 69 37 chr20 66669650 66669868 -5484014 + L2 LINE L2 2841 3065 -248 299 267 42 14 chr20 66670549 66670695 -5483187 - L1ME1 LINE L1 0 6164 6016 414 266 24 8 chr20 66670738 66670862 -5483020 + L2 LINE L2 3147 3272 0 285 242 15 0 chr20 66670864 66670930 -5482952 - MIR SINE MIR -95 167 101 359 317 12 0 chr20 66671229 66671342 -5482540 + MIR SINE MIR 33 149 -59 1280 234 45 118 chr20 66671395 66672015 -5481867 - MLT1K LTR MaLR 0 588 14 1756 234 107 4 chr20 66672398 66672856 -5481026 - MLT1D LTR MaLR 0 505 1 433 223 160 11 chr20 66673066 66673241 -5480641 - L2 LINE L2 0 3313 3113 349 326 58 7 chr20 66673274 66673412 -5480470 - L2 LINE L2 0 3313 3169 906 282 25 3 chr20 66673724 66674008 -5479874 - MLT1H LTR MaLR -258 291 2 358 340 49 11 chr20 66674742 66674927 -5478955 + MIR SINE MIR 1 192 -70 198 320 0 53 chr20 66675010 66675085 -5478797 + MIR SINE MIR 17 87 -121 3485 148 47 6 chr20 66676145 66676787 -5477095 - L1MB3 LINE L1 -10 6173 5506 495 259 7 22 chr20 66676791 66676926 -5476956 - MIR SINE MIR -102 160 28 213 311 189 0 chr20 66677091 66677223 -5476659 + MIR SINE MIR 106 262 0 273 271 92 58 chr20 66677485 66677692 -5476190 - L2 LINE L2 -667 2647 2434 345 309 0 0 chr20 66677777 66677887 -5475995 - L3 LINE CR1 -483 1094 985 314 284 69 0 chr20 66678028 66678130 -5475752 + MIR SINE MIR 47 155 -107 343 286 4 18 chr20 66678220 66678254 -5475628 + (TGG)n Simple_repeat Simple_repeat 1 34 -1164 5208 121 17 55 chr20 66678254 66679193 -5474689 - MER4D LTR ERV1 0 903 1 343 286 4 18 chr20 66679193 66679436 -5474446 + (TGG)n Simple_repeat Simple_repeat 34 1198 0 352 235 6 6 chr20 66679474 66679653 -5474229 + (TGG)n Simple_repeat Simple_repeat 1 179 0 1689 196 29 14 chr20 66680692 66681039 -5472843 - MLT1A1 LTR MaLR 0 365 14 420 250 53 0 chr20 66682188 66682320 -5471562 + L2 LINE L2 2402 2540 -774 437 304 132 9 chr20 66682437 66682664 -5471218 - MLT1K LTR MaLR -19 569 315 382 261 5 33 chr20 66682933 66683525 -5470357 + (CACCC)n Simple_repeat Simple_repeat 1 575 0 204 134 15 30 chr20 66683581 66683648 -5470234 + (CACCC)n Simple_repeat Simple_repeat 4 69 0 2419 100 0 0 chr20 66683897 66684208 -5469674 + AluY SINE Alu 1 311 0 265 322 96 20 chr20 66684521 66684667 -5469215 + MIR SINE MIR 101 257 -5 1877 167 3 3 chr20 66684683 66684976 -5468906 + AluSx SINE Alu 1 293 -19 789 298 30 16 chr20 66685845 66686150 -5467732 + LTR16A LTR ERVL 18 326 -124 749 193 27 16 chr20 66686283 66686470 -5467412 + MER53 DNA DNA 1 189 0 427 280 20 100 chr20 66686644 66686759 -5467123 - MIR SINE MIR 0 262 168 1105 242 109 54 chr20 66686759 66687126 -5466756 - MLT1J LTR MaLR 0 511 109 2397 100 0 0 chr20 66687126 66687425 -5466457 - AluSx SINE Alu -13 299 1 1105 242 109 54 chr20 66687425 66687541 -5466341 - MLT1J LTR MaLR -402 109 1 427 280 20 100 chr20 66687541 66687625 -5466257 - MIR SINE MIR -94 168 79 218 250 0 0 chr20 66688453 66688505 -5465377 - MIR3 SINE MIR -1 207 156 287 326 21 35 chr20 66688520 66688664 -5465218 + MER117 DNA MER1_type 14 155 -42 228 371 49 21 chr20 66688713 66688856 -5465026 - MIR3 SINE MIR -57 151 5 296 164 0 49 chr20 66689038 66689099 -5464783 - MLT1J2 LTR MaLR -6 444 387 1613 183 154 39 chr20 66689112 66689554 -5464328 + MLT1D LTR MaLR 13 505 0 303 298 99 8 chr20 66689922 66690043 -5463839 + MIR3 SINE MIR 37 168 -40 1490 190 33 0 chr20 66690378 66690683 -5463199 + L1MB5 LINE L1 5854 6168 -6 730 209 57 19 chr20 66691208 66691419 -5462463 + MER20 DNA MER1_type 1 219 0 267 257 218 0 chr20 66691421 66691522 -5462360 + L2 LINE L2 3191 3313 0 270 326 37 22 chr20 66691637 66691772 -5462110 + L2 LINE L2 2799 2935 -379 279 349 77 6 chr20 66693165 66693334 -5460548 + LTR16C LTR ERVL 161 341 -150 281 317 106 19 chr20 66693622 66693785 -5460097 - MER5A DNA MER1_type -8 181 1 2180 196 60 48 chr20 66693930 66694549 -5459333 - MLT1E2 LTR MaLR 0 626 1 394 288 153 58 chr20 66694727 66694876 -5459006 + MLT1L LTR MaLR 312 445 -170 2147 103 24 0 chr20 66694876 66694998 -5458884 + AluSx SINE Alu 1 119 -193 273 57 0 0 chr20 66694998 66695033 -5458849 + (CA)n Simple_repeat Simple_repeat 2 36 0 2147 103 24 0 chr20 66695033 66695200 -5458682 + AluSx SINE Alu 119 297 -15 394 288 153 58 chr20 66695200 66695324 -5458558 + MLT1L LTR MaLR 445 611 -4 286 269 91 42 chr20 66695350 66695592 -5458290 + MLT1H LTR MaLR 14 278 -144 903 163 139 6 chr20 66696545 66696717 -5457165 + MER58A DNA MER1_type 30 224 0 283 238 12 12 chr20 66698352 66698432 -5455450 - MIR SINE MIR -64 198 119 342 0 0 0 chr20 66698861 66698899 -5454983 + (CA)n Simple_repeat Simple_repeat 1 38 0 888 294 95 14 chr20 66699948 66700610 -5453272 - L2 LINE L2 -1 3312 2592 335 204 0 107 chr20 66700654 66700757 -5453125 - MER96B DNA MER1_type? 0 417 326 * 1429 153 31 15 chr20 66700743 66701004 -5452878 + MER96B DNA MER1_type? 153 417 0 275 195 13 39 chr20 66701301 66701378 -5452504 - MLT1K LTR MaLR -322 266 192 235 290 0 0 chr20 66702094 66702156 -5451726 - MER113 DNA MER1_type? -2 519 458 21 0 0 0 chr20 66702165 66702186 -5451696 + AT_rich Low_complexity Low_complexity 1 21 0 2190 106 3 0 chr20 66702530 66702847 -5451035 - AluSx SINE Alu 0 318 1 965 167 41 50 chr20 66703028 66703249 -5450633 + MER20 DNA MER1_type 1 219 0 758 153 8 0 chr20 66703321 66703468 -5450414 + FLAM_C SINE Alu 1 148 0 722 237 158 14 chr20 66703581 66703796 -5450086 - MIR SINE MIR -2 260 15 2417 80 0 7 chr20 66704261 66704560 -5449322 - AluSq SINE Alu -16 297 1 2725 185 7 45 chr20 66704603 66705187 -5448695 - L1MB5 LINE L1 -10 6164 5603 345 250 87 0 chr20 66705203 66705295 -5448587 - MIR SINE MIR -118 144 45 649 186 0 50 chr20 66705449 66705589 -5448293 + AluJb SINE Alu 3 135 -177 304 266 62 26 chr20 66706027 66706140 -5447742 - MIR SINE MIR -62 146 30 464 261 108 6 chr20 66706146 66706322 -5447560 - MIR SINE MIR -24 238 45 223 64 21 43 chr20 66706397 66706444 -5447438 + (TTTTTG)n Simple_repeat Simple_repeat 2 47 0 952 256 0 9 chr20 66706878 66707101 -5446781 - MIR SINE MIR -34 228 8 420 296 156 7 chr20 66708250 66708471 -5445411 + MIR SINE MIR 11 257 -5 392 276 138 10 chr20 66708475 66708671 -5445211 + LTR16C LTR ERVL 182 402 -89 502 322 30 0 chr20 66708777 66708976 -5444906 + MIR SINE MIR 56 260 -2 655 207 0 0 chr20 66709042 66709163 -5444719 + MER45A DNA AcHobo 58 178 0 281 299 19 47 chr20 66709170 66709277 -5444605 + MIR SINE MIR 109 212 -50 4176 150 70 18 chr20 66709281 66709952 -5443930 + L1MB8 LINE L1 5293 6017 -161 1324 171 168 9 chr20 66709952 66710267 -5443615 - MLT1A1 LTR MaLR 0 365 1 4176 150 70 18 chr20 66710267 66710427 -5443455 + L1MB8 LINE L1 6017 6167 -11 488 160 10 0 chr20 66710580 66710680 -5443202 + (CA)n Simple_repeat Simple_repeat 2 102 0 285 188 174 0 chr20 66711148 66711217 -5442665 - MLT1L LTR MaLR -221 394 314 772 124 10 0 chr20 66711595 66711802 -5442080 + (TTCA)n Simple_repeat Simple_repeat 1 209 0 1837 159 48 55 chr20 66712430 66712865 -5441017 + MSTB1 LTR MaLR 1 432 0 565 218 48 7 chr20 66713045 66713192 -5440690 - MIR SINE MIR -11 251 99 288 304 30 22 chr20 66714160 66714295 -5439587 + HAL1 LINE L1 10 145 -2362 3894 159 44 38 chr20 66714675 66715443 -5438439 - MER4E LTR ERV1 0 779 7 1186 286 91 40 chr20 66715448 66716171 -5437711 + HAL1 LINE L1 965 1879 -628 4176 89 2 0 chr20 66716171 66716724 -5437158 - MER41A LTR ERV1 0 554 1 1186 286 91 40 chr20 66716724 66717151 -5436731 + HAL1 LINE L1 1879 2283 -224 1116 239 70 15 chr20 66717151 66717423 -5436459 - MLT1A1 LTR MaLR 0 365 79 1379 120 0 0 chr20 66717428 66717612 -5436270 - AluSg/x SINE Alu -12 300 117 2301 132 0 0 chr20 66717657 66717967 -5435915 + AluSx SINE Alu 1 310 -2 390 268 146 16 chr20 66717973 66718096 -5435786 + HAL1 LINE L1 1243 1381 -1126 292 290 20 20 chr20 66718265 66718365 -5435517 - MLT1K LTR MaLR -57 531 432 363 256 0 0 chr20 66718367 66718445 -5435437 - MER81 DNA DNA 0 114 37 971 210 0 54 chr20 66718457 66718681 -5435201 + MLT1A1 LTR MaLR 8 219 -146 335 256 99 16 chr20 66719505 66719626 -5434256 - MER91A DNA MER1_type -2 194 64 1933 262 68 28 chr20 66719835 66720556 -5433326 + L1ME3A LINE L1 5421 6170 0 381 283 59 79 chr20 66720641 66720945 -5432937 + L2 LINE L2 3009 3306 -7 28 48 0 0 chr20 66721187 66721229 -5432653 + AT_rich Low_complexity Low_complexity 1 42 0 346 217 76 25 chr20 66721244 66721401 -5432481 - L1ME4a LINE L1 -3 6118 5954 365 291 92 31 chr20 66722059 66722255 -5431627 + L1ME4a LINE L1 5873 6080 -41 2308 109 3 6 chr20 66723177 66723490 -5430392 - AluSp SINE Alu -1 312 1 234 91 0 0 chr20 66723629 66723662 -5430220 + (CA)n Simple_repeat Simple_repeat 2 34 0 191 186 163 58 chr20 66724015 66724101 -5429781 - MIR SINE MIR -86 122 28 509 278 202 23 chr20 66724117 66724419 -5429463 - L2 LINE L2 0 3313 2958 759 208 115 0 chr20 66724419 66724602 -5429280 - MER21B LTR ERV1 -498 365 162 189 107 0 0 chr20 66724602 66724630 -5429252 + (TTTC)n Simple_repeat Simple_repeat 3 30 0 258 186 163 81 chr20 66724737 66724823 -5429059 - MER21B LTR ERV1 -770 93 1 * 988 227 190 52 chr20 66724823 66725200 -5428682 + MLT1D LTR MaLR 75 504 -1 225 164 30 60 chr20 66725247 66725314 -5428568 - L2 LINE L2 -524 2790 2726 438 305 39 0 chr20 66725342 66725496 -5428386 - MIR SINE MIR -24 238 79 562 240 88 9 chr20 66725855 66726031 -5427851 + MER20 DNA MER1_type 1 210 -9 1205 158 51 9 chr20 66726256 66726471 -5427411 - AluJb SINE Alu -2 310 87 2262 108 6 13 chr20 66726477 66726791 -5427091 - AluSq SINE Alu -1 312 1 219 242 45 0 chr20 66726980 66727046 -5426836 + L2 LINE L2 3244 3312 -1 604 207 14 7 chr20 66727096 66727241 -5426641 - MER45A DNA AcHobo 0 178 33 1843 193 112 85 chr20 66728338 66728975 -5424907 + MLT1E1 LTR MaLR 1 654 0 966 272 107 56 chr20 66729021 66729202 -5424680 + MLT1J LTR MaLR 52 222 -289 2383 127 6 3 chr20 66729202 66729565 -5424317 + THE1B LTR MaLR 1 364 0 966 272 107 56 chr20 66729565 66729813 -5424069 + MLT1J LTR MaLR 222 503 -8 379 200 38 122 chr20 66729817 66729971 -5423911 - MIR SINE MIR -63 145 19 266 245 138 27 chr20 66730282 66730596 -5423286 + L2 LINE L2 2743 3094 -219 487 200 26 17 chr20 66730642 66730757 -5423125 - ORSL DNA AcHobo 0 275 160 252 303 114 15 chr20 66730860 66730992 -5422890 + L2 LINE L2 3169 3313 0 1189 229 122 72 chr20 66731384 66731599 -5422283 + MLT1D LTR MaLR 1 204 -301 2491 58 0 3 chr20 66731599 66731892 -5421990 + AluY SINE Alu 1 292 -19 1189 229 122 72 chr20 66731892 66732151 -5421731 + MLT1D LTR MaLR 204 499 -6 277 267 13 27 chr20 66732611 66732686 -5421196 + MIR SINE MIR 51 124 -138 326 227 45 61 chr20 66733080 66733212 -5420670 - Charlie8 DNA MER1_type -2229 188 59 2434 94 0 0 chr20 66735074 66735371 -5418511 - AluSx SINE Alu -15 297 1 239 200 344 44 chr20 66736547 66736637 -5417245 - MIR SINE MIR -35 227 111 408 250 23 0 chr20 66736677 66736765 -5417117 - MER20 DNA MER1_type -26 193 104 314 320 7 14 chr20 66737183 66737330 -5416552 - L1MC5 LINE L1 -149 7812 7667 317 213 164 16 chr20 66737797 66737919 -5415963 + L3 LINE CR1 1427 1566 -11 458 207 170 69 chr20 66738208 66738396 -5415486 - ORSL DNA AcHobo -27 248 42 535 188 0 0 chr20 66738881 66738982 -5414900 + FRAM SINE Alu 76 176 0 241 268 98 45 chr20 66739556 66739668 -5414214 + L2 LINE L2 3196 3313 0 385 321 75 17 chr20 66741020 66741316 -5412566 + L2 LINE L2 2661 3048 -265 356 304 99 35 chr20 66741548 66741749 -5412133 + MLT1L LTR MaLR 399 612 -3 369 0 0 0 chr20 66742065 66742106 -5411776 + (CA)n Simple_repeat Simple_repeat 1 41 0 219 227 0 0 chr20 66742281 66742325 -5411557 + MIR SINE MIR 106 149 -59 2117 100 0 0 chr20 66742670 66742929 -5410953 - AluSx SINE Alu -20 292 34 181 375 128 8 chr20 66743260 66743503 -5410379 - L2 LINE L2 -81 3232 2961 457 259 0 9 chr20 66744108 66744216 -5409666 + MER117 DNA MER1_type 53 159 -38 254 284 15 0 chr20 66744211 66744278 -5409604 + MER117 DNA MER1_type 113 180 -17 * 1947 163 30 0 chr20 66746537 66746838 -5407044 + AluJo SINE Alu 1 310 -2 665 253 190 48 chr20 66746867 66747309 -5406573 - MLT1D LTR MaLR 0 505 1 373 267 9 0 chr20 66747905 66748010 -5405872 + MIR SINE MIR 39 144 -118 24 32 0 0 chr20 66748163 66748194 -5405688 + AT_rich Low_complexity Low_complexity 1 31 0 2328 115 0 0 chr20 66748267 66748562 -5405320 + AluSx SINE Alu 1 295 -17 414 323 15 8 chr20 66749339 66749472 -5404410 - L2 LINE L2 0 3313 3180 324 259 112 9 chr20 66749548 66749664 -5404218 - MLT1I LTR MaLR -276 133 6 410 293 0 7 chr20 66749665 66749805 -5404077 - L2 LINE L2 -280 3033 2895 698 240 120 20 chr20 66749946 66750279 -5403603 + MLT1C LTR MaLR 64 440 -27 343 294 33 28 chr20 66750354 66750534 -5403348 - L2 LINE L2 -610 2704 2524 596 256 6 6 chr20 66750543 66750699 -5403183 - L1MD2 LINE L1 0 6359 6204 369 291 30 64 chr20 66750707 66750941 -5402941 - L2 LINE L2 -798 2516 2291 207 328 0 0 chr20 66751049 66751113 -5402769 + MIR SINE MIR 193 256 -6 206 295 49 0 chr20 66751187 66751248 -5402634 + MIR SINE MIR 193 256 -6 182 296 0 0 chr20 66751249 66751293 -5402589 + MIR SINE MIR 213 256 -6 216 279 49 0 chr20 66751322 66751383 -5402499 + MIR SINE MIR 193 256 -6 * 522 277 92 62 chr20 66751379 66751747 -5402135 - L2 LINE L2 -1042 2272 1894 277 326 32 0 chr20 66751821 66751916 -5401966 - MIR SINE MIR -118 144 47 313 220 61 39 chr20 66752477 66752614 -5401268 + MIR SINE MIR 8 150 -62 387 245 102 20 chr20 66752686 66752833 -5401049 + MLT1L LTR MaLR 110 268 -347 270 0 0 0 chr20 66752869 66752899 -5400983 + (TC)n Simple_repeat Simple_repeat 2 31 0 2578 198 25 29 chr20 66753340 66753935 -5399947 + L1MB7 LINE L1 5571 6163 -21 190 327 160 20 chr20 66754106 66754256 -5399626 - MIR SINE MIR -78 184 14 676 241 12 12 chr20 66754663 66754833 -5399049 - MER45A DNA AcHobo 0 178 9 295 305 216 16 chr20 66755077 66755461 -5398421 - L2 LINE L2 0 3272 2812 812 171 46 7 chr20 66756219 66756371 -5397511 - MER20 DNA MER1_type -58 161 4 1870 104 0 104 chr20 66756730 66757048 -5396834 + AluSx SINE Alu 1 285 -27 444 69 63 40 chr20 66757049 66757224 -5396658 + (TA)n Simple_repeat Simple_repeat 1 179 0 324 132 33 40 chr20 66757227 66757379 -5396503 + (TTATA)n Simple_repeat Simple_repeat 4 154 0 306 259 99 38 chr20 66757386 66757517 -5396365 + L1MCa LINE L1 1926 2064 -4362 261 144 58 0 chr20 66757524 66757628 -5396254 + (TATAA)n Simple_repeat Simple_repeat 5 114 0 24 67 0 0 chr20 66757634 66757679 -5396203 + AT_rich Low_complexity Low_complexity 1 45 0 490 168 155 32 chr20 66758061 66758216 -5395666 + MER53 DNA DNA 8 181 -8 771 254 163 11 chr20 66758431 66758573 -5395309 - L1ME1 LINE L1 -17 6149 6030 877 179 123 0 chr20 66758573 66758768 -5395114 + MER20 DNA MER1_type 1 219 0 771 254 163 11 chr20 66758768 66759086 -5394796 - L1ME1 LINE L1 -136 6030 5645 378 281 120 41 chr20 66759379 66759608 -5394274 + MLT1L LTR MaLR 237 503 -112 769 223 60 33 chr20 66759608 66759823 -5394059 + MER58A DNA MER1_type 1 221 -3 378 281 120 41 chr20 66759823 66759935 -5393947 + MLT1L LTR MaLR 503 605 -10 271 333 95 14 chr20 66759986 66760196 -5393686 - MIR SINE MIR -30 232 6 291 285 29 88 chr20 66761702 66761839 -5392043 + L2 LINE L2 3183 3311 -2 352 153 24 35 chr20 66761954 66762039 -5391843 - ORSL DNA AcHobo -61 214 131 574 135 104 0 chr20 66762049 66762145 -5391737 + FLAM_A SINE Alu 18 123 -19 278 151 23 105 chr20 66762174 66762211 -5391671 - ORSL DNA AcHobo -158 117 79 2191 116 0 0 chr20 66762211 66762514 -5391368 - AluSg SINE Alu -7 303 1 278 151 23 105 chr20 66762514 66762562 -5391320 - ORSL DNA AcHobo -196 79 39 346 310 70 23 chr20 66762816 66762987 -5390895 + MIR SINE MIR 20 198 -64 211 400 55 6 chr20 66762997 66763162 -5390720 - MIR SINE MIR -8 254 82 959 54 11 43 chr20 66763367 66763552 -5390330 + (TCTCC)n Simple_repeat Simple_repeat 2 180 0 574 235 68 0 chr20 66764688 66764820 -5389062 + L1PB3 LINE L1 6003 6143 -11 221 295 13 39 chr20 66765374 66765452 -5388430 + MIR SINE MIR 117 192 -70 745 240 87 5 chr20 66765488 66765684 -5388198 - MIR SINE MIR -49 213 2 1178 103 35 0 chr20 66765945 66766119 -5387763 + AluSg/x SINE Alu 117 296 -16 402 250 52 15 chr20 66766130 66766266 -5387616 + L1MC/D LINE L1 5624 5764 -2044 289 287 75 0 chr20 66766357 66766451 -5387431 + MER5A DNA MER1_type 9 109 -80 455 321 19 6 chr20 66766491 66766650 -5387232 - MIR SINE MIR -38 224 64 788 162 42 14 chr20 66767279 66767421 -5386461 + MER20 DNA MER1_type 15 160 -59 308 170 85 32 chr20 66767470 66767564 -5386318 - MER5A DNA MER1_type -80 109 11 334 361 88 14 chr20 66768287 66768503 -5385379 - MIR SINE MIR -11 251 20 813 205 4 0 chr20 66768654 66768898 -5384984 + (TGGA)n Simple_repeat Simple_repeat 1 245 0 535 336 31 18 chr20 66769205 66769434 -5384448 - MIR SINE MIR -14 248 17 1041 234 62 38 chr20 66770154 66770445 -5383437 + MLT1A1 LTR MaLR 1 298 -67 230 0 33 0 chr20 66770449 66770479 -5383403 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 478 313 45 35 chr20 66771603 66771804 -5382078 - MIR SINE MIR -47 215 13 193 244 0 0 chr20 66771965 66772006 -5381876 + MIR SINE MIR 110 150 -112 241 160 85 75 chr20 66772277 66772289 -5381593 + L1ME LINE L1 5695 5705 -416 685 245 122 96 chr20 66772289 66772823 -5381059 + MLT1H LTR MaLR 2 549 0 241 160 85 75 chr20 66772823 66772904 -5380978 + L1ME LINE L1 5705 5789 -332 2827 13 0 0 chr20 66773126 66773443 -5380439 - AluYb8 SINE Alu -1 317 1 3054 182 26 16 chr20 66773574 66774216 -5379666 + L1MB7 LINE L1 5319 5967 -217 1388 180 0 76 chr20 66774216 66774544 -5379338 + AluJo SINE Alu 1 303 -9 399 56 0 0 chr20 66774554 66774608 -5379274 + (TA)n Simple_repeat Simple_repeat 1 54 0 1232 126 0 0 chr20 66774608 66774782 -5379100 + AluJb SINE Alu 132 305 -7 899 177 18 6 chr20 66774782 66774946 -5378936 + L1MB7 LINE L1 5964 6129 -55 319 239 14 0 chr20 66776767 66776838 -5377044 + MLT1D LTR MaLR 1 72 -433 1841 223 67 9 chr20 66776839 66777284 -5376598 + MLT1D LTR MaLR 35 505 0 192 259 32 0 chr20 66777550 66777628 -5376254 - L2 LINE L2 -265 3007 2929 200 266 76 51 chr20 66778578 66778657 -5375225 + MIR3 SINE MIR 95 175 -33 480 227 18 9 chr20 66778721 66778831 -5375051 - MER103 DNA DNA -1 165 55 256 231 231 37 chr20 66779120 66779254 -5374628 + MIR SINE MIR 85 244 -18 188 266 82 0 chr20 66779406 66779485 -5374397 - MIR SINE MIR -21 187 104 311 330 84 78 chr20 66779864 66780234 -5373648 + L2 LINE L2 2898 3269 -3 509 204 10 0 chr20 66781609 66781707 -5372175 - LTR16C LTR ERVL -17 474 376 715 270 80 11 chr20 66782967 66783241 -5370641 + L1MC3 LINE L1 7457 7749 -36 938 173 65 6 chr20 66783371 66783539 -5370343 + MER45A DNA AcHobo 1 178 0 256 139 5 112 chr20 66784089 66784276 -5369606 + (TGG)n Simple_repeat Simple_repeat 1 167 0 225 150 0 125 chr20 66784401 66784601 -5369281 + (TGG)n Simple_repeat Simple_repeat 3 177 0 734 251 11 6 chr20 66784771 66784950 -5368932 + MER20 DNA MER1_type 37 216 -3 390 226 60 0 chr20 66786368 66786452 -5367430 - L2 LINE L2 -21 3292 3204 185 255 98 0 chr20 66786620 66786671 -5367211 + MIR SINE MIR 92 147 -115 1667 188 10 0 chr20 66786848 66787151 -5366731 + AluJb SINE Alu 4 309 -3 1477 122 0 9 chr20 66788351 66788564 -5365318 + AluSg/x SINE Alu 90 300 -10 303 210 48 0 chr20 66788697 66788759 -5365123 - MER5B DNA MER1_type -110 68 4 549 309 92 0 chr20 66788836 66789043 -5364839 + MIR SINE MIR 15 240 -22 716 235 96 0 chr20 66790744 66790931 -5362951 - MIR SINE MIR -12 250 46 27 0 0 0 chr20 66791009 66791036 -5362846 + AT_rich Low_complexity Low_complexity 1 27 0 260 206 16 16 chr20 66791173 66791236 -5362646 + L2 LINE L2 3133 3195 -77 327 409 7 0 chr20 66791630 66791767 -5362115 + L1MC/D LINE L1 5534 5671 -2137 2330 89 0 0 chr20 66792139 66792441 -5361441 - AluSx SINE Alu -10 302 1 525 279 80 35 chr20 66794021 66794247 -5359635 + MIR SINE MIR 27 262 0 322 250 0 14 chr20 66794293 66794365 -5359517 - MER5B DNA MER1_type 0 178 108 578 218 141 0 chr20 66794375 66794517 -5359365 + MER63A DNA MER1_type 12 173 -37 207 250 0 42 chr20 66794545 66794617 -5359265 + MER5B DNA MER1_type 108 176 -2 2317 78 0 3 chr20 66795995 66796291 -5357591 - AluY SINE Alu -16 295 1 976 284 35 3 chr20 66796409 66796698 -5357184 - L1ME3A LINE L1 -194 5976 5679 479 246 120 15 chr20 66797228 66797423 -5356459 - MIR SINE MIR -11 251 34 558 250 79 13 chr20 66797427 66797579 -5356303 + MIR SINE MIR 31 192 -70 423 0 0 0 chr20 66798167 66798214 -5355668 + (CA)n Simple_repeat Simple_repeat 2 48 0 254 268 88 118 chr20 66799568 66799908 -5353974 + MLT1K LTR MaLR 259 588 0 243 246 100 27 chr20 66800049 66800159 -5353723 + L2 LINE L2 3146 3263 -9 1103 264 128 60 chr20 66800203 66800736 -5353146 - L1ME3A LINE L1 -10 6160 5592 210 329 67 27 chr20 66800877 66801026 -5352856 - L2 LINE L2 -220 3052 2898 190 352 55 0 chr20 66801159 66801250 -5352632 - L2 LINE L2 -582 2732 2637 267 315 11 11 chr20 66801306 66801395 -5352487 - MER117 DNA MER1_type 0 197 109 3704 180 17 12 chr20 66803256 66803946 -5349936 - L1MB2 LINE L1 -2 6169 5476 2492 64 23 9 chr20 66803966 66804310 -5349572 - THE1A LTR MaLR 0 355 7 12101 96 3 4 chr20 66804312 66805891 -5347991 - THE1A-int LTR MaLR 0 1580 4 2722 77 11 0 chr20 66805893 66806244 -5347638 - THE1A LTR MaLR 0 355 1 390 252 44 52 chr20 66806311 66806446 -5347436 - MIR SINE MIR -53 209 76 875 204 74 60 chr20 66807438 66807654 -5346228 + MER20 DNA MER1_type 1 219 0 337 316 158 7 chr20 66807669 66807808 -5346074 + MIR3 SINE MIR 18 177 -31 653 197 17 73 chr20 66807906 66808036 -5345846 + MER3 DNA MER1_type 42 161 -48 2112 114 0 3 chr20 66808036 66808334 -5345548 + AluSx SINE Alu 2 298 -14 653 197 17 73 chr20 66808334 66808381 -5345501 + MER3 DNA MER1_type 161 209 0 228 292 14 14 chr20 66808381 66808407 -5345475 - MER3 DNA MER1_type -162 47 22 1773 141 35 0 chr20 66808527 66808811 -5345071 + AluSx SINE Alu 11 304 -8 184 255 0 39 chr20 66809319 66809370 -5344512 + MIR SINE MIR 126 174 -88 642 286 17 0 chr20 66809406 66809581 -5344301 - MER5A DNA MER1_type -8 181 4 400 306 38 16 chr20 66809806 66809992 -5343890 + MIR SINE MIR 2 191 -71 865 195 0 6 chr20 66810652 66810816 -5343066 - FRAM SINE Alu -4 172 10 2391 70 0 0 chr20 66810950 66811252 -5342630 - AluY SINE Alu -9 302 1 613 260 169 0 chr20 66811266 66811497 -5342385 + L1ME3A LINE L1 5896 6165 -5 548 253 68 34 chr20 66811844 66812021 -5341861 + MIR SINE MIR 35 219 -43 2368 118 0 0 chr20 66812021 66812327 -5341555 + AluSx SINE Alu 1 306 -6 548 253 68 34 chr20 66812327 66812370 -5341512 + MIR SINE MIR 219 259 -3 558 314 18 47 chr20 66812563 66812837 -5341045 - MLT1L LTR MaLR -122 493 228 431 306 100 38 chr20 66813825 66814086 -5339796 + MLT1L LTR MaLR 321 597 -18 2297 78 0 11 chr20 66814092 66814415 -5339467 - AluY SINE Alu 0 320 1 916 145 0 0 chr20 66815463 66815587 -5338295 + AluJb SINE Alu 1 124 -188 27 0 0 0 chr20 66815598 66815625 -5338257 + AT_rich Low_complexity Low_complexity 1 27 0 237 86 52 0 chr20 66815625 66815683 -5338199 + (TA)n Simple_repeat Simple_repeat 1 61 0 1017 177 0 43 chr20 66815691 66815877 -5338005 + AluJb SINE Alu 129 306 -6 237 309 96 27 chr20 66816499 66816687 -5337195 - MIR SINE MIR -51 211 11 2318 91 0 0 chr20 66816966 66817276 -5336606 + AluSx SINE Alu 1 310 0 1230 248 51 0 chr20 66817331 66817646 -5336236 - MER58B DNA MER1_type 0 341 11 848 189 162 0 chr20 66818150 66818335 -5335547 + MER20 DNA MER1_type 1 215 -4 1061 243 28 1 chr20 66819062 66819327 -5334555 - L1MD3 LINE L1 0 7808 7546 2523 90 7 0 chr20 66819327 66819637 -5334245 - AluSx SINE Alu 0 312 1 1061 243 28 1 chr20 66819637 66819652 -5334230 - L1MD3 LINE L1 -262 7546 7533 195 114 0 0 chr20 66819962 66819997 -5333885 + (A)n Simple_repeat Simple_repeat 1 35 0 191 338 56 0 chr20 66820588 66820659 -5333223 + MIR SINE MIR 118 192 -70 2294 122 0 0 chr20 66820832 66821143 -5332739 + AluSx SINE Alu 1 311 -1 412 264 74 14 chr20 66821555 66821703 -5332179 + Charlie7 DNA MER1_type 2067 2223 -389 380 279 14 29 chr20 66821703 66821843 -5332039 + MLT1I LTR MaLR 2 139 -270 2270 92 0 61 chr20 66821900 66822228 -5331654 + AluSq SINE Alu 1 308 -5 230 302 48 0 chr20 66822301 66822364 -5331518 + MLT1I LTR MaLR 148 213 -196 215 146 24 73 chr20 66822675 66822757 -5331125 + (TTAAA)n Simple_repeat Simple_repeat 3 80 0 189 0 0 0 chr20 66823139 66823160 -5330722 + (A)n Simple_repeat Simple_repeat 1 21 0 438 123 46 77 chr20 66823837 66823967 -5329915 - L1MD3 LINE L1 0 7995 7870 370 258 67 18 chr20 66824214 66824418 -5329464 - MIR SINE MIR 0 262 45 265 230 70 30 chr20 66829293 66829393 -5324489 - L1MC4a LINE L1 -1908 5900 5797 2518 70 3 9 chr20 66830061 66830422 -5323460 + AluSp SINE Alu 1 359 0 209 254 18 27 chr20 66831546 66831656 -5322226 + (CCCCG)n Simple_repeat Simple_repeat 5 113 0 189 0 0 0 chr20 66831977 66831998 -5321884 + (GGA)n Simple_repeat Simple_repeat 1 21 0 523 242 12 36 chr20 66833667 66833832 -5320050 + MER45A DNA AcHobo 16 176 -2 285 240 88 24 chr20 66834230 66834355 -5319527 - L2 LINE L2 -221 3051 2919 277 159 0 0 chr20 66834693 66834737 -5319145 + L2 LINE L2 3266 3309 -4 351 0 0 0 chr20 66835052 66835091 -5318791 + (TGAA)n Simple_repeat Simple_repeat 2 40 0 861 258 13 9 chr20 66835206 66835435 -5318447 + MIR SINE MIR 23 252 -10 186 261 62 0 chr20 66837073 66837138 -5316744 - MER5A DNA MER1_type -91 98 30 667 312 9 19 chr20 66837230 66837445 -5316437 - MIR SINE MIR -46 216 4 545 276 160 37 chr20 66837644 66837938 -5315944 - Charlie8 DNA MER1_type -2057 360 31 354 267 168 0 chr20 66838324 66838455 -5315427 + LTR67 LTR ERVL 35 187 -370 610 269 17 6 chr20 66838474 66838649 -5315233 + LTR67 LTR ERVL 381 557 0 695 199 15 51 chr20 66838813 66839009 -5314873 + MER53 DNA DNA 1 189 0 2129 153 0 3 chr20 66839149 66839457 -5314425 - AluSx SINE Alu -5 307 1 1065 280 106 13 chr20 66839472 66839868 -5314014 + MLT1K LTR MaLR 69 501 -87 310 303 147 0 chr20 66839923 66840032 -5313850 - MIR3 SINE MIR -51 157 33 285 330 39 7 chr20 66840377 66840517 -5313365 - MIR SINE MIR -61 147 3 755 207 16 11 chr20 66840578 66840766 -5313116 + MER53 DNA DNA 1 189 0 876 233 203 9 chr20 66840829 66841155 -5312727 + L2 LINE L2 2925 3313 0 395 269 145 0 chr20 66841597 66841742 -5312140 - MIR SINE MIR -57 205 40 279 228 18 114 chr20 66841749 66841801 -5312081 + MIR SINE MIR 110 165 -97 2120 116 3 3 chr20 66841801 66842085 -5311797 + AluSq SINE Alu 1 284 -29 180 77 0 0 chr20 66842088 66842114 -5311768 + (TAAA)n Simple_repeat Simple_repeat 4 29 0 279 228 18 114 chr20 66842114 66842171 -5311711 + MIR SINE MIR 167 212 -50 400 271 49 0 chr20 66842477 66842599 -5311283 + MER91C DNA MER1_type 13 140 0 213 266 284 28 chr20 66842614 66842941 -5310941 - L2 LINE L2 0 3313 2903 358 191 0 0 chr20 66844123 66844191 -5309691 + MER103 DNA DNA 10 77 -89 2385 78 0 0 chr20 66844192 66844474 -5309408 - AluSc SINE Alu -4 305 24 259 250 113 93 chr20 66844523 66844727 -5309155 - MLT1K LTR MaLR 0 588 381 2220 125 0 6 chr20 66845058 66845424 -5308458 + AluSq SINE Alu 3 366 0 236 390 76 0 chr20 66845585 66845703 -5308179 + L2 LINE L2 3146 3272 0 330 372 8 0 chr20 66845991 66846112 -5307770 - L2 LINE L2 -6 3307 3186 1616 85 0 0 chr20 66846266 66846467 -5307415 - AluSg/x SINE Alu -12 300 100 489 298 0 32 chr20 66846513 66846671 -5307211 + MIR SINE MIR 66 218 -44 2464 90 3 3 chr20 66846695 66847006 -5306876 + AluSx SINE Alu 1 311 -1 1995 141 0 7 chr20 66847531 66847834 -5306048 - AluSx SINE Alu 0 301 1 1964 123 10 30 chr20 66849163 66849464 -5304418 + AluJo SINE Alu 1 295 -17 1017 203 14 5 chr20 66849559 66849776 -5304106 + MER20 DNA MER1_type 1 219 0 394 246 67 55 chr20 66850288 66850463 -5303419 + MIR SINE MIR 14 182 -50 2037 146 0 25 chr20 66850464 66850779 -5303103 - AluJb SINE Alu -5 307 1 202 333 11 11 chr20 66850783 66850870 -5303012 + MIR SINE MIR 168 254 -8 2208 122 3 0 chr20 66850871 66851166 -5302716 - AluSg SINE Alu -14 296 1 185 186 139 0 chr20 66851364 66851407 -5302475 + L2 LINE L2 3221 3269 -3 245 192 19 0 chr20 66851436 66851488 -5302394 + MIR SINE MIR 46 98 -164 268 221 248 0 chr20 66851500 66851613 -5302269 + L2 LINE L2 2473 2613 -701 266 283 66 19 chr20 66851816 66851922 -5301960 + L2 LINE L2 3203 3313 0 564 344 10 5 chr20 66851954 66852146 -5301736 + MIR SINE MIR 12 204 -58 349 216 14 0 chr20 66852273 66852347 -5301535 + MER116 DNA Mariner 1 75 -5 263 211 0 14 chr20 66852672 66852743 -5301139 + CT-rich Low_complexity Low_complexity 3 72 0 301 295 141 0 chr20 66853353 66853509 -5300373 - MIR SINE MIR -6 256 79 578 243 26 20 chr20 66853782 66853934 -5299948 + MIR SINE MIR 40 192 -70 381 302 50 17 chr20 66854148 66854327 -5299555 - MIR SINE MIR -36 226 42 1520 201 52 69 chr20 66855575 66856038 -5297844 - MLT1C LTR MaLR -7 460 6 1019 229 66 0 chr20 66856113 66856418 -5297464 + MLT2F LTR ERVL 196 520 -143 512 296 67 14 chr20 66856582 66856805 -5297077 + LTR16A1 LTR ERVL 209 443 -14 615 167 35 9 chr20 66857112 66857226 -5296656 - L1MD3 LINE L1 -13 7982 7866 242 229 83 127 chr20 66857274 66857431 -5296451 - L2 LINE L2 -204 3068 2919 334 291 60 33 chr20 66858635 66858786 -5295096 + MIR SINE MIR 57 211 -51 586 276 61 11 chr20 66858921 66859102 -5294780 + MIR SINE MIR 73 262 0 333 226 94 98 chr20 66859169 66859274 -5294608 + L1MC4a LINE L1 5680 5784 -2024 2012 142 3 29 chr20 66859274 66859620 -5294262 - MER1B DNA MER1_type 0 337 1 333 226 94 98 chr20 66859620 66859748 -5294134 + L1MC4a LINE L1 5784 5912 -1896 255 344 49 25 chr20 66860484 66860502 -5293380 - MIR SINE MIR -28 234 218 1982 121 11 7 chr20 66860502 66860814 -5293068 - AluSx SINE Alu 0 313 1 255 344 49 25 chr20 66860814 66860957 -5292925 - MIR SINE MIR -44 218 68 1924 145 37 0 chr20 66861211 66861507 -5292375 - AluSq SINE Alu -2 311 5 185 243 0 122 chr20 66861514 66861588 -5292294 + L2 LINE L2 3248 3312 -1 1982 145 3 3 chr20 66861616 66861905 -5291977 - AluJb SINE Alu -23 289 1 396 244 127 55 chr20 66862041 66862362 -5291520 + L1MC4a LINE L1 5829 6172 -1636 1558 246 125 52 chr20 66862405 66862711 -5291171 + L1ME3 LINE L1 5460 5742 -420 2290 87 10 7 chr20 66862711 66863000 -5290882 + AluSg SINE Alu 3 292 -18 1558 246 125 52 chr20 66863000 66863348 -5290534 + L1ME3 LINE L1 5742 6162 0 1425 149 0 30 chr20 66863352 66863587 -5290295 + AluJb SINE Alu 85 312 0 2704 198 44 2 chr20 66863596 66864163 -5289719 + L1MB5 LINE L1 5572 6162 -12 2299 94 0 31 chr20 66864166 66864202 -5289680 - AluSx SINE Alu -2 310 274 231 36 0 0 chr20 66864202 66864230 -5289652 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 2299 94 0 31 chr20 66864230 66864513 -5289369 - AluSx SINE Alu -38 274 1 4217 76 39 27 chr20 66864515 66865109 -5288773 - L1PA11 LINE L1 -8 6166 5566 3209 110 21 0 chr20 66865111 66865583 -5288299 - L1PA11 LINE L1 -822 5324 4843 415 318 23 0 chr20 66865868 66866044 -5287838 + MIR SINE MIR 65 244 -18 2450 82 0 0 chr20 66867041 66867345 -5286537 - AluY SINE Alu -7 304 1 2123 110 7 3 chr20 66867345 66867637 -5286245 - AluSx SINE Alu -19 293 1 288 344 16 0 chr20 66867671 66867793 -5286089 - MIR SINE MIR -125 137 14 418 304 110 28 chr20 66868315 66868623 -5285259 + L2 LINE L2 2804 3152 -120 2640 82 2 72 chr20 66868623 66868973 -5284909 + THE1C LTR MaLR 1 321 -54 2117 108 24 0 chr20 66868973 66869260 -5284622 + AluSq SINE Alu 1 294 -19 2640 82 2 72 chr20 66869260 66869312 -5284570 + THE1C LTR MaLR 321 375 0 418 304 110 28 chr20 66869312 66869395 -5284487 + L2 LINE L2 3152 3227 -45 229 246 309 11 chr20 66869890 66870065 -5283817 + L1ME4a LINE L1 5838 6064 -57 1062 206 17 97 chr20 66870385 66870735 -5283147 + MLT1A2 LTR MaLR 53 374 0 853 225 167 93 chr20 66870742 66871214 -5282668 + MLT1K LTR MaLR 81 587 -1 228 219 0 47 chr20 66871387 66871451 -5282431 + CT-rich Low_complexity Low_complexity 2 62 0 291 176 81 40 chr20 66871559 66871633 -5282249 + MIR SINE MIR 77 153 -109 2087 130 3 0 chr20 66871643 66871928 -5281954 + AluSx SINE Alu 1 286 -26 214 265 44 29 chr20 66872874 66872942 -5280940 + L2 LINE L2 3118 3186 -86 693 266 14 9 chr20 66873078 66873292 -5280590 - MIR SINE MIR -32 230 16 262 247 69 101 chr20 66873468 66873715 -5280167 - L2 LINE L2 -8 3305 3067 672 221 0 0 chr20 66875351 66875491 -5278391 + MIR SINE MIR 46 185 -77 190 237 26 132 chr20 66875615 66875684 -5278198 - MIR SINE MIR -12 250 196 1762 145 24 24 chr20 66875684 66875981 -5277901 - AluJb SINE Alu -15 297 1 190 237 26 132 chr20 66875981 66876025 -5277857 - MIR SINE MIR -66 196 149 373 306 112 0 chr20 66876070 66876266 -5277616 - MLT1L LTR MaLR -49 566 349 333 306 108 5 chr20 66876710 66876932 -5276950 - L1M4 LINE L1 -1016 5130 4886 541 257 50 81 chr20 66876965 66877170 -5276712 - L1M4 LINE L1 -1327 4819 4632 653 97 0 29 chr20 66877170 66877273 -5276609 + HY3 scRNA scRNA 1 100 -1 541 257 50 81 chr20 66877273 66877487 -5276395 - L1M4 LINE L1 -1514 4632 4413 951 255 29 0 chr20 66878016 66878259 -5275623 - MIR SINE MIR -1 261 12 302 243 214 50 chr20 66878609 66878749 -5275133 + MLT1I LTR MaLR 104 266 -143 700 210 43 6 chr20 66879718 66879880 -5274002 - MIR SINE MIR -55 207 40 689 219 11 27 chr20 66880592 66880775 -5273107 + MIR SINE MIR 63 242 -20 445 232 20 66 chr20 66880801 66880952 -5272930 - L2 LINE L2 -1 3312 3169 293 200 0 0 chr20 66881082 66881132 -5272750 + MLT1I LTR MaLR 104 153 -256 424 231 8 5 chr20 66881419 66881553 -5272329 - L2 LINE L2 -307 3006 2871 2054 90 0 0 chr20 66881720 66881731 -5272151 - AluY SINE Alu -19 292 282 254 73 24 0 chr20 66881731 66881772 -5272110 + (TA)n Simple_repeat Simple_repeat 1 42 0 2054 90 0 0 chr20 66881772 66882016 -5271866 - AluY SINE Alu -28 283 37 929 294 45 49 chr20 66882518 66883011 -5270871 + MLT1K LTR MaLR 4 494 -94 566 228 144 71 chr20 66883207 66883328 -5270554 + L2 LINE L2 2743 2854 -459 2062 196 106 40 chr20 66883328 66883911 -5269971 - MLT1E3 LTR MaLR 0 624 3 566 228 144 71 chr20 66883911 66884235 -5269647 + L2 LINE L2 2854 3238 -75 249 266 22 79 chr20 66884408 66884482 -5269400 + MIR SINE MIR 77 141 -121 2508 73 3 0 chr20 66884482 66884783 -5269099 + AluSg SINE Alu 1 302 -8 249 266 22 79 chr20 66884783 66884847 -5269035 + MIR SINE MIR 141 207 -55 241 276 165 24 chr20 66884855 66884982 -5268900 + L1P4 LINE L1 5419 5563 -605 375 269 0 10 chr20 66885233 66885337 -5268545 - MIR SINE MIR -113 149 47 3075 189 19 2 chr20 66885426 66886013 -5267869 + L1MB7 LINE L1 5587 6183 -1 2128 130 0 0 chr20 66886025 66886325 -5267557 + AluSx SINE Alu 1 300 -12 246 286 48 29 chr20 66886396 66886501 -5267381 + MER103 DNA DNA 15 121 -45 821 273 31 18 chr20 66886519 66886746 -5267136 - MIR SINE MIR -10 252 23 1042 173 37 14 chr20 66887016 66887230 -5266652 - MER20 DNA MER1_type 0 219 1 275 308 114 43 chr20 66887273 66887559 -5266323 + L2 LINE L2 2858 3185 -128 1856 164 0 22 chr20 66887559 66887871 -5266011 - AluJb SINE Alu -5 307 3 275 308 114 43 chr20 66887871 66888006 -5265876 + L2 LINE L2 3185 3309 -4 2331 97 0 3 chr20 66888819 66889117 -5264765 + AluSx SINE Alu 1 297 -15 1868 215 37 50 chr20 66889125 66889421 -5264461 + L1MC5 LINE L1 7273 7571 -390 1939 158 17 45 chr20 66889421 66889840 -5264042 + L1MA8 LINE L1 5879 6285 -6 1868 215 37 50 chr20 66889840 66890166 -5263716 + L1MC5 LINE L1 7571 7887 -74 1077 139 6 6 chr20 66890977 66891143 -5262739 + AluJb SINE Alu 147 312 0 1730 122 112 4 chr20 66891385 66891663 -5262219 - AluJb SINE Alu -4 308 1 422 293 73 0 chr20 66892697 66892820 -5261062 + MIR SINE MIR 13 144 -118 263 305 10 71 chr20 66892850 66892905 -5260977 + L2 LINE L2 3116 3173 -140 2317 93 0 7 chr20 66892905 66893206 -5260676 + AluSq SINE Alu 1 299 -14 263 305 10 71 chr20 66893206 66893347 -5260535 + L2 LINE L2 3173 3300 -13 317 88 18 18 chr20 66893757 66893814 -5260068 - MER53 DNA DNA -5 184 128 907 160 12 24 chr20 66894224 66894393 -5259489 - FAM SINE Alu -13 172 6 503 188 8 47 chr20 66894402 66894530 -5259352 - MER53 DNA DNA -56 133 11 21 36 0 0 chr20 66899270 66899298 -5254584 + AT_rich Low_complexity Low_complexity 1 28 0 2530 64 0 0 chr20 66899472 66899768 -5254114 - AluY SINE Alu -13 298 3 234 216 68 135 chr20 66900812 66900960 -5252922 - L2 LINE L2 -1 3271 3134 485 174 0 23 chr20 66901407 66901493 -5252389 - AluJ/FRAM SINE Alu -15 297 214 228 333 20 10 chr20 66902159 66902258 -5251624 - MIR SINE MIR -56 206 107 354 290 76 7 chr20 66902342 66902487 -5251395 - MIR SINE MIR -96 166 12 501 321 118 0 chr20 66902627 66902848 -5251034 - MIR SINE MIR -14 248 2 331 233 20 100 chr20 66902853 66903003 -5250879 - L1ME LINE L1 -355 5766 5629 406 186 14 0 chr20 66903112 66903182 -5250700 - tRNA-His-CAC tRNA tRNA 0 75 5 2092 115 3 14 chr20 66903193 66903507 -5250375 - AluSq SINE Alu 0 311 1 2285 113 13 3 chr20 66903752 66904061 -5249821 - AluSx SINE Alu 0 312 1 582 173 30 30 chr20 66904771 66904904 -5248978 + MER5A DNA MER1_type 1 133 -56 851 186 7 7 chr20 66905069 66905214 -5248668 - FRAM SINE Alu -26 150 6 1965 137 0 17 chr20 66905796 66906096 -5247786 + AluSx SINE Alu 1 295 -17 633 283 64 25 chr20 66906350 66906664 -5247218 - L1ME4a LINE L1 -185 5936 5611 26 30 0 0 chr20 66909038 66909071 -5244811 + AT_rich Low_complexity Low_complexity 1 33 0 21 36 0 0 chr20 66909344 66909372 -5244510 + AT_rich Low_complexity Low_complexity 1 28 0 234 225 212 26 chr20 66909679 66909830 -5244052 - MIR SINE MIR 0 262 84 770 213 60 0 chr20 66909870 66910020 -5243862 - MER45A DNA AcHobo -19 159 1 930 231 0 24 chr20 66910085 66910293 -5243589 - MIR SINE MIR -21 241 39 1635 195 20 3 chr20 66911132 66911430 -5242452 + AluJo SINE Alu 1 303 -9 22 56 0 0 chr20 66912335 66912371 -5241511 + AT_rich Low_complexity Low_complexity 1 36 0 2135 116 0 13 chr20 66912434 66912736 -5241146 + AluSg SINE Alu 2 299 -11 524 267 65 33 chr20 66912805 66912996 -5240886 + MIR SINE MIR 21 218 -44 4610 130 129 68 chr20 66913528 66914959 -5238923 + pTR5 LTR ERV1 741 2438 0 462 288 0 0 chr20 66914962 66915080 -5238802 + MIR SINE MIR 102 219 -43 624 218 18 48 chr20 66915123 66915288 -5238594 + MER5B DNA MER1_type 2 161 -17 389 220 88 0 chr20 66915289 66915380 -5238502 + MER5A DNA MER1_type 4 102 -87 200 235 153 47 chr20 66915655 66915740 -5238142 - MIR SINE MIR -60 202 109 1469 89 0 0 chr20 66915983 66916162 -5237720 - AluSq SINE Alu -27 286 108 480 150 0 0 chr20 66916166 66916279 -5237603 + G-rich Low_complexity Low_complexity 1 113 0 862 66 0 0 chr20 66916282 66916388 -5237494 - AluSq SINE Alu -207 106 1 260 296 0 12 chr20 66916887 66916968 -5236914 - MIR3 SINE MIR -20 188 109 235 277 116 27 chr20 66917041 66917153 -5236729 + L2 LINE L2 3025 3146 -167 239 307 9 44 chr20 66917244 66917358 -5236524 - L2 LINE L2 -22 3291 3182 315 242 76 0 chr20 66917463 66917595 -5236287 - L1MB7 LINE L1 -9 6175 6034 346 254 62 77 chr20 66917596 66917805 -5236077 - L2 LINE L2 -273 3040 2835 403 327 176 0 chr20 66917985 66918144 -5235738 - MIR SINE MIR -6 256 70 260 326 114 8 chr20 66918536 66918668 -5235214 - MIR SINE MIR -12 250 105 671 155 93 31 chr20 66919038 66919199 -5234683 + L1MC3 LINE L1 7614 7784 -1 361 320 158 10 chr20 66920579 66920882 -5233000 + L1ME LINE L1 5296 5643 -2165 304 174 248 0 chr20 66921284 66921405 -5232477 + L1ME4a LINE L1 5959 6109 -12 237 256 128 0 chr20 66922242 66922359 -5231523 - LTR33 LTR ERVL -295 226 95 719 238 91 20 chr20 66922438 66922690 -5231192 - L1ME1 LINE L1 -5 6161 5892 261 0 0 0 chr20 66926405 66926434 -5227448 + (GAAA)n Simple_repeat Simple_repeat 4 32 0 2405 115 6 15 chr20 66927153 66927493 -5226389 + MER1B DNA MER1_type 1 337 0 1957 125 34 7 chr20 66928101 66928398 -5225484 - AluSx SINE Alu -7 305 1 326 303 40 0 chr20 66928467 66928566 -5225316 + MIR SINE MIR 46 148 -114 1695 133 31 0 chr20 66928580 66928836 -5225046 + AluJo SINE Alu 34 297 -15 861 243 0 0 chr20 66928836 66929013 -5224869 + AluJo/FRAM SINE Alu 134 310 -2 262 359 122 0 chr20 66929050 66929181 -5224701 - L2 LINE L2 -2 3311 3165 191 323 97 11 chr20 66929250 66929343 -5224539 - MIR SINE MIR -145 117 17 604 258 30 0 chr20 66929899 66930031 -5223851 + MER58A DNA MER1_type 1 136 0 390 209 52 8 chr20 66930212 66930346 -5223536 + L1MC4 LINE L1 7903 8042 0 24 0 0 0 chr20 66930826 66930850 -5223032 + AT_rich Low_complexity Low_complexity 1 24 0 1908 133 149 11 chr20 66931589 66931965 -5221917 - MSTA LTR MaLR 0 428 1 2123 153 10 0 chr20 66932777 66933085 -5220797 + AluSx SINE Alu 1 311 -1 247 200 0 0 chr20 66933138 66933188 -5220694 + L1ME LINE L1 5621 5670 -451 2336 95 7 0 chr20 66933198 66933502 -5220380 - AluSc SINE Alu -3 306 1 196 313 47 0 chr20 66934146 66934210 -5219672 - L2 LINE L2 -10 3262 3196 495 343 148 28 chr20 66934305 66934369 -5219513 + L2 LINE L2 1119 1174 -2140 2956 147 80 7 chr20 66934369 66934922 -5218960 - LTR49 LTR ERV1 0 595 3 495 343 148 28 chr20 66934922 66935728 -5218154 + L2 LINE L2 1174 2094 -1220 454 280 34 8 chr20 66936072 66936190 -5217692 + L2 LINE L2 3188 3308 -5 340 333 60 20 chr20 66936181 66936430 -5217452 + L2 LINE L2 2333 2591 -723 * 2717 250 58 7 chr20 66936430 66937500 -5216382 + L1MB2 LINE L1 5038 6167 -4 2254 67 50 0 chr20 66939213 66939496 -5214386 - AluSg SINE Alu -13 297 1 303 286 245 20 chr20 66940158 66940354 -5213528 + MIR SINE MIR 21 260 -2 462 179 62 9 chr20 66941559 66941574 -5212308 - L1MA10 LINE L1 0 6334 6320 943 265 112 16 chr20 66941574 66941948 -5211934 - L1ME1 LINE L1 -5 6161 5752 873 114 0 0 chr20 66946033 66946156 -5207726 + FLAM_C SINE Alu 1 123 -10 594 224 46 91 chr20 66946562 66946587 -5207295 + MIR SINE MIR 5 30 -232 1689 128 82 29 chr20 66946587 66946868 -5207014 + AluSx SINE Alu 1 296 -16 594 224 46 91 chr20 66946868 66947083 -5206799 + MIR SINE MIR 30 234 -28 378 185 169 110 chr20 66947728 66947982 -5205900 + MER33 DNA MER1_type 56 324 0 1634 159 3 84 chr20 66948315 66948649 -5205233 - AluJb SINE Alu -3 309 3 587 148 65 0 chr20 66949046 66949154 -5204728 - L1MA10 LINE L1 -2 6332 6218 1095 167 0 0 chr20 66949455 66949641 -5204241 - AluSg/x SINE Alu -9 303 118 1620 230 26 5 chr20 66950260 66950642 -5203240 + MLT1B LTR MaLR 1 390 0 1520 101 135 80 chr20 66951148 66951436 -5202446 - AluSx SINE Alu -8 304 1 1348 257 87 11 chr20 66951772 66952211 -5201671 - MLT1D LTR MaLR 0 505 34 2239 70 4 11 chr20 66952442 66952713 -5201169 - AluSx SINE Alu -17 295 27 433 221 19 10 chr20 66953131 66953235 -5200647 + MIR SINE MIR 107 211 -51 542 186 59 106 chr20 66953420 66953497 -5200385 - Charlie4a DNA MER1_type -1466 495 416 1340 164 156 19 chr20 66953497 66953760 -5200122 + AluJo SINE Alu 2 300 -2 542 186 59 106 chr20 66953760 66953810 -5200072 - Charlie4a DNA MER1_type -1545 416 365 785 172 0 15 chr20 66953810 66953944 -5199938 + FLAM_A SINE Alu 1 132 -1 542 186 59 106 chr20 66953944 66954051 -5199831 - Charlie4a DNA MER1_type -1596 365 271 486 33 0 0 chr20 66954059 66954119 -5199763 - AluY SINE Alu -15 297 238 1497 140 140 4 chr20 66954137 66954402 -5199480 + AluJo SINE Alu 1 301 -11 22 0 0 0 chr20 66954504 66954526 -5199356 + GC_rich Low_complexity Low_complexity 1 22 0 21 71 0 0 chr20 66954608 66954650 -5199232 + GC_rich Low_complexity Low_complexity 1 42 0 24 32 0 0 chr20 66954695 66954726 -5199156 + GC_rich Low_complexity Low_complexity 1 31 0 656 211 20 20 chr20 66955745 66955897 -5197985 + MER45A DNA AcHobo 27 178 0 192 306 28 37 chr20 66956365 66956473 -5197409 + L2 LINE L2 3166 3272 -41 24 53 0 0 chr20 66956612 66956650 -5197232 + GC_rich Low_complexity Low_complexity 1 38 0 2075 123 3 7 chr20 66957094 66957404 -5196478 - AluSx SINE Alu -3 309 1 729 158 38 49 chr20 66958825 66959009 -5194873 + MER53 DNA DNA 8 189 0 4390 123 6 2 chr20 66959276 66959908 -5193974 - MER41B LTR ERV1 0 635 1 359 274 82 15 chr20 66959962 66960097 -5193785 + MIR SINE MIR 65 208 -54 427 306 75 0 chr20 66960298 66960432 -5193450 + L2 LINE L2 2679 2822 -492 196 0 86 29 chr20 66960831 66960866 -5193016 + T-rich Low_complexity Low_complexity 2 38 0 438 74 0 0 chr20 66960868 66960922 -5192960 - AluJ/FRAM SINE Alu -30 282 229 1789 152 14 10 chr20 66960950 66961240 -5192642 + AluJb SINE Alu 1 291 -21 421 229 124 0 chr20 66961355 66961460 -5192422 - MIR SINE MIR -102 160 43 869 203 0 0 chr20 66961848 66962011 -5191871 - MER58B DNA MER1_type 0 341 179 2292 229 54 54 chr20 66962014 66962369 -5191513 + MER82 DNA MER2_type 1 358 -295 1900 162 7 16 chr20 66962369 66962678 -5191204 - AluJb SINE Alu -6 306 1 2292 229 54 54 chr20 66962678 66962969 -5190913 + MER82 DNA MER2_type 357 647 -6 879 195 24 0 chr20 66962976 66963145 -5190737 - MER58B DNA MER1_type -168 173 1 264 328 16 32 chr20 66963971 66964057 -5189825 - L2 LINE L2 0 3313 3228 1962 115 50 4 chr20 66964057 66964336 -5189546 + AluJb SINE Alu 1 292 -20 264 328 16 32 chr20 66964336 66964374 -5189508 - L2 LINE L2 -85 3228 3191 1957 119 3 7 chr20 66964821 66965149 -5188733 - AluSx SINE Alu 0 327 1 2230 81 10 7 chr20 66965605 66965915 -5187967 + AluY SINE Alu 1 311 0 251 354 56 0 chr20 66966050 66966194 -5187688 + L1ME LINE L1 5486 5637 -484 2287 80 3 3 chr20 66966241 66966541 -5187341 + AluSp SINE Alu 1 300 -13 704 200 77 145 chr20 66966549 66966874 -5187008 + MER58B DNA MER1_type 39 341 0 225 189 236 28 chr20 66966912 66967018 -5186864 + L1P3 LINE L1 5744 5871 -283 198 167 0 0 chr20 66967625 66967661 -5186221 + GA-rich Low_complexity Low_complexity 3 38 0 1148 106 0 11 chr20 66967661 66967841 -5186041 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 2043 96 35 0 chr20 66967843 66968144 -5185738 + AluSq SINE Alu 1 313 0 410 248 0 20 chr20 66968144 66968245 -5185637 - Charlie5 DNA MER1_type -2513 99 1 1893 145 10 0 chr20 66969619 66969909 -5183973 + AluSx SINE Alu 2 294 -18 437 239 18 0 chr20 66969975 66970088 -5183794 - MIR SINE MIR -60 202 88 221 136 0 23 chr20 66970143 66970187 -5183695 + (TTCC)n Simple_repeat Simple_repeat 2 44 0 1062 222 14 0 chr20 66970430 66970642 -5183240 - MER20 DNA MER1_type -4 215 1 585 304 76 36 chr20 66970725 66971054 -5182828 - L1MC4a LINE L1 -313 5808 5491 1838 134 40 3 chr20 66971680 66971979 -5181903 + AluSx SINE Alu 1 310 -2 226 266 16 0 chr20 66972257 66972321 -5181561 + MER116 DNA Mariner 1 65 -15 1326 186 107 0 chr20 66972321 66972584 -5181298 + AluJo SINE Alu 3 293 -19 1254 306 33 13 chr20 66972617 66973075 -5180807 - L1MC4a LINE L1 -1802 6006 5540 1960 230 30 26 chr20 66973622 66974134 -5179748 + MLT1F LTR MaLR 1 542 0 185 283 17 0 chr20 66974364 66974424 -5179458 + MIR SINE MIR 92 152 -110 391 336 31 0 chr20 66974522 66974650 -5179232 - L2 LINE L2 0 3272 3141 829 165 0 0 chr20 66975319 66975452 -5178430 - AluSq/x SINE Alu -179 133 1 212 279 184 10 chr20 66975452 66975581 -5178301 + MIR SINE MIR 20 170 -38 1631 138 94 7 chr20 66975609 66975907 -5177975 - MER33 DNA MER1_type 0 324 1 2096 128 3 3 chr20 66976316 66976628 -5177254 - AluSx SINE Alu 0 312 1 584 279 104 90 chr20 66977076 66977545 -5176337 + MLT1K LTR MaLR 1 476 0 268 373 52 33 chr20 66977567 66977720 -5176162 - MIR3 SINE MIR -49 159 4 1594 224 91 36 chr20 66977728 66978202 -5175680 - MLT1D LTR MaLR 0 505 6 473 259 48 36 chr20 66978580 66978746 -5175136 + MIR SINE MIR 35 202 -60 189 280 65 28 chr20 66979558 66979665 -5174217 - MIR SINE MIR -34 228 118 260 157 79 11 chr20 66979809 66979898 -5173984 - L1ME4a LINE L1 0 6121 6027 2248 82 3 3 chr20 66979982 66980285 -5173597 - AluSp SINE Alu -10 303 1 397 255 115 50 chr20 66980325 66980447 -5173435 - L1ME LINE L1 -363 5758 5645 1841 134 29 26 chr20 66980447 66980753 -5173129 - AluJo SINE Alu -5 307 1 397 255 115 50 chr20 66980753 66980908 -5172974 - L1ME LINE L1 -476 5645 5463 2019 125 3 10 chr20 66981216 66981521 -5172361 - AluJb SINE Alu -9 303 1 330 243 0 54 chr20 66982018 66982129 -5171753 - L2 LINE L2 -21 3292 3188 1817 145 33 0 chr20 66983324 66983631 -5170251 - AluSx SINE Alu 0 316 1 219 323 128 5 chr20 66985025 66985218 -5168664 - MIR SINE MIR -48 214 5 2173 112 0 0 chr20 66986436 66986739 -5167143 - AluSc SINE Alu -6 303 1 238 301 0 60 chr20 66986809 66986992 -5166890 + GA-rich Low_complexity Low_complexity 1 172 0 252 286 5 49 chr20 66987052 66987237 -5166645 + GA-rich Low_complexity Low_complexity 1 177 0 348 266 62 16 chr20 66987422 66987550 -5166332 + L2 LINE L2 3136 3269 -3 249 319 60 17 chr20 66987993 66988109 -5165773 - L2 LINE L2 -15 3257 3137 199 250 0 0 chr20 66988234 66988286 -5165596 - L2 LINE L2 -339 2975 2924 182 200 0 44 chr20 66989214 66989259 -5164623 - MIR SINE MIR -117 145 103 1382 155 32 49 chr20 66989781 66990065 -5163817 + AluJo SINE Alu 1 279 -33 300 352 83 30 chr20 66990105 66990477 -5163405 - L2 LINE L2 -9 3263 2872 2228 104 0 0 chr20 66990591 66990900 -5162982 - AluY SINE Alu -2 309 1 502 230 56 0 chr20 66990924 66991050 -5162832 - MER58B DNA MER1_type -5 336 204 608 193 61 0 chr20 66991182 66991296 -5162586 + MER46A DNA MER2_type 1 121 -115 330 26 0 0 chr20 66991296 66991335 -5162547 + (TG)n Simple_repeat Simple_repeat 2 40 0 730 194 30 22 chr20 66991336 66991470 -5162412 - AluJo SINE Alu -176 136 2 550 219 8 8 chr20 66991472 66991600 -5162282 + MER46A DNA MER2_type 109 236 0 694 277 152 15 chr20 66991604 66991947 -5161935 - L2 LINE L2 -36 3277 2888 2100 126 10 0 chr20 66992686 66992995 -5160887 - AluSx SINE Alu 0 312 1 684 227 119 11 chr20 66992995 66993255 -5160627 + LTR37A LTR ERV1 139 426 0 487 254 78 57 chr20 66993255 66993448 -5160434 - MIR SINE MIR -59 203 7 1810 136 4 4 chr20 66993768 66994048 -5159834 + AluJb SINE Alu 14 293 -19 541 320 51 0 chr20 66994414 66994611 -5159271 - MIR SINE MIR -6 256 50 2122 234 57 4 chr20 66994778 66995291 -5158591 + MLT1F LTR MaLR 1 540 -2 857 310 21 22 chr20 66995295 66995783 -5158099 + MLT1F-int LTR MaLR 4 611 -760 274 341 16 16 chr20 66995962 66996085 -5157797 + MLT1F-int LTR MaLR 756 878 -493 229 263 323 0 chr20 66997705 66997804 -5156078 + MIR SINE MIR 28 158 -104 227 273 0 0 chr20 66999135 66999201 -5154681 + MIR SINE MIR 21 86 -176 339 275 0 0 chr20 66999309 66999389 -5154493 - MIR SINE MIR -79 183 104 651 143 8 63 chr20 67000812 67000938 -5152944 - MER20 DNA MER1_type -68 151 33 456 261 46 77 chr20 67000983 67001178 -5152704 - MLT1L LTR MaLR -202 391 121 377 238 124 0 chr20 67001904 67002009 -5151873 - L2 LINE L2 -2 3270 3153 435 295 23 36 chr20 67002080 67002392 -5151490 + L1MD3 LINE L1 6054 7984 -11 234 0 0 0 chr20 67002428 67002454 -5151428 + (TG)n Simple_repeat Simple_repeat 2 27 0 579 306 128 43 chr20 67003267 67003799 -5150083 - L2 LINE L2 -411 2903 2327 208 266 60 0 chr20 67004297 67004393 -5149489 - MIR SINE MIR -56 152 47 289 330 62 41 chr20 67005828 67006125 -5147757 - L2 LINE L2 -305 3008 2697 2042 98 3 0 chr20 67006125 67006410 -5147472 - AluSc SINE Alu -10 299 14 289 330 62 41 chr20 67006410 67006470 -5147412 - L2 LINE L2 -616 2697 2640 21 0 0 0 chr20 67006892 67006913 -5146969 + GC_rich Low_complexity Low_complexity 1 21 0 692 205 35 87 chr20 67007137 67007366 -5146516 - MER20 DNA MER1_type -2 217 1 251 311 83 8 chr20 67007379 67007511 -5146371 - MIR SINE MIR -74 188 47 244 259 54 36 chr20 67007695 67007807 -5146075 + MIR SINE MIR 58 171 -37 2113 117 0 0 chr20 67007808 67008098 -5145784 - AluSg SINE Alu -20 290 1 245 258 62 80 chr20 67009253 67009478 -5144404 + L2 LINE L2 2987 3207 -65 180 200 171 14 chr20 67010364 67010434 -5143448 - MIR SINE MIR -69 139 59 255 228 130 22 chr20 67010566 67010658 -5143224 + MIR SINE MIR 16 117 -145 2431 56 0 3 chr20 67010890 67011193 -5142689 + AluY SINE Alu 1 302 -9 242 289 140 3 chr20 67011301 67011439 -5142443 + MER45 DNA AcHobo 1 1560 -21 204 219 94 16 chr20 67014985 67015049 -5138833 + L2 LINE L2 3169 3237 -35 300 370 0 11 chr20 67015059 67015240 -5138642 + (CATA)n Simple_repeat Simple_repeat 1 179 0 * 437 316 0 29 chr20 67015133 67015506 -5138376 + (CA)n Simple_repeat Simple_repeat 1 362 0 337 256 77 13 chr20 67015818 67015974 -5137908 + LTR16C LTR ERVL 133 298 -193 249 253 3 0 chr20 67016494 67016563 -5137319 - MIR SINE MIR -65 143 86 1313 271 97 26 chr20 67016802 67017336 -5136546 + MLT1K LTR MaLR 17 588 0 1628 237 40 67 chr20 67017350 67017874 -5136008 - MLT1J LTR MaLR -1 510 1 275 359 20 7 chr20 67017957 67018117 -5135765 - MIR SINE MIR -63 145 37 274 325 111 8 chr20 67018325 67018451 -5135431 - MIR SINE MIR -118 144 6 282 341 23 16 chr20 67018658 67018787 -5135095 + MIR SINE MIR 113 242 -20 401 324 130 51 chr20 67018999 67019215 -5134667 - MIR SINE MIR -1 261 29 230 329 123 0 chr20 67020323 67020469 -5133413 + L2 LINE L2 2987 3150 -163 568 296 141 5 chr20 67020874 67021080 -5132802 - MIR SINE MIR -13 249 16 374 235 17 14 chr20 67021543 67021834 -5132048 + (TGGA)n Simple_repeat Simple_repeat 1 292 0 390 355 21 7 chr20 67021886 67022027 -5131855 + MIR SINE MIR 1 143 -119 208 51 26 26 chr20 67022028 67022067 -5131815 + (TAA)n Simple_repeat Simple_repeat 2 40 0 621 185 15 0 chr20 67022073 67022203 -5131679 - L1MB7 LINE L1 -229 5955 5824 503 308 20 7 chr20 67022240 67022386 -5131496 + MIR SINE MIR 7 154 -108 394 306 69 19 chr20 67022778 67022938 -5130944 + MER5B DNA MER1_type 5 172 -6 1756 208 51 41 chr20 67023256 67023525 -5130357 + L1MB7 LINE L1 5417 5682 -502 243 0 0 0 chr20 67023525 67023552 -5130330 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5986 53 0 3 chr20 67023552 67024269 -5129613 - L1PA6 LINE L1 -15 6139 5425 1756 208 51 41 chr20 67024269 67024532 -5129350 + L1MB7 LINE L1 5681 5955 -229 490 254 7 29 chr20 67025709 67025847 -5128035 + L2 LINE L2 3136 3270 -2 272 329 62 26 chr20 67025892 67026187 -5127695 + L2 LINE L2 2921 3313 0 984 312 85 23 chr20 67026852 67027306 -5126576 + MLT1K LTR MaLR 49 473 -115 2043 217 55 91 chr20 67027306 67027366 -5126516 - MLT1E2 LTR MaLR 0 626 565 2327 99 3 0 chr20 67027366 67027678 -5126204 + AluSp SINE Alu 1 313 0 2043 217 55 91 chr20 67027678 67027966 -5125916 - MLT1E2 LTR MaLR -61 565 309 2163 127 10 0 chr20 67027966 67028273 -5125609 - AluSx SINE Alu 0 312 3 2043 217 55 91 chr20 67028273 67028572 -5125310 - MLT1E2 LTR MaLR -317 309 1 984 312 85 23 chr20 67028572 67028601 -5125281 + MLT1K LTR MaLR 473 562 -26 2188 74 3 3 chr20 67028895 67029221 -5124661 - AluY SINE Alu 0 326 1 224 298 25 8 chr20 67029582 67029703 -5124179 - L2 LINE L2 -338 2975 2853 789 148 8 0 chr20 67030202 67030330 -5123552 - FLAM_C SINE Alu -4 129 1 1149 146 0 11 chr20 67031506 67031684 -5122198 + AluJo SINE Alu 121 296 -16 861 292 80 41 chr20 67031756 67032143 -5121739 + L2 LINE L2 2911 3312 -1 2075 102 3 72 chr20 67032261 67032596 -5121286 - AluSx SINE Alu 0 312 1 312 230 30 20 chr20 67032596 67032696 -5121186 - MER69 DNA AcHobo -6 2520 2420 235 236 14 14 chr20 67032785 67032857 -5121025 - L2 LINE L2 -309 2963 2892 453 248 8 62 chr20 67033564 67033693 -5120189 - MIR SINE MIR -118 144 23 594 225 0 76 chr20 67034350 67034470 -5119412 + L1MB7 LINE L1 6000 6110 -74 1489 148 48 68 chr20 67034470 67034636 -5119246 - AluJo SINE Alu -8 304 145 2192 100 0 3 chr20 67034636 67034926 -5118956 - AluSg SINE Alu -21 289 1 1489 148 48 68 chr20 67034926 67035069 -5118813 - AluJo SINE Alu -167 145 1 594 225 0 76 chr20 67035069 67035116 -5118766 + L1MB7 LINE L1 6110 6159 -25 838 253 122 44 chr20 67035125 67035341 -5118541 + L1MD3 LINE L1 7583 7837 -158 2216 107 0 3 chr20 67035341 67035640 -5118242 + AluSx SINE Alu 1 298 -14 838 253 122 44 chr20 67035640 67035767 -5118115 + L1MD3 LINE L1 7837 7953 -42 375 172 78 95 chr20 67036339 67036403 -5117479 + MER45A DNA AcHobo 32 95 -1486 1992 116 44 3 chr20 67036403 67036696 -5117186 - AluSx SINE Alu -7 305 1 375 172 78 95 chr20 67036696 67036747 -5117135 + MER45A DNA AcHobo 95 145 -33 380 362 20 13 chr20 67036769 67036921 -5116961 - MIR SINE MIR -1 261 109 218 235 161 37 chr20 67036953 67037034 -5116848 - MIR3 SINE MIR -37 171 81 535 338 114 29 chr20 67037543 67038216 -5115666 - L2 LINE L2 0 3272 2548 881 229 90 0 chr20 67038255 67038456 -5115426 + MER20 DNA MER1_type 1 219 0 259 323 138 8 chr20 67039697 67039827 -5114055 - MIR SINE MIR -11 251 105 544 262 47 115 chr20 67040604 67040858 -5113024 - MER113 DNA MER1_type? -159 362 141 1820 163 0 0 chr20 67040858 67041141 -5112741 - AluSx SINE Alu -2 310 28 544 262 47 115 chr20 67041141 67041268 -5112614 - MER113 DNA MER1_type? -380 141 7 235 189 57 0 chr20 67041403 67041456 -5112426 + CT-rich Low_complexity Low_complexity 2 57 0 376 261 51 8 chr20 67041617 67041740 -5112142 + MER5B DNA MER1_type 13 147 -42 330 190 21 106 chr20 67041844 67041986 -5111896 - MLT1L LTR MaLR -146 463 236 280 226 16 0 chr20 67041986 67042048 -5111834 - MLT1J LTR MaLR -337 174 112 1831 118 52 7 chr20 67042232 67042519 -5111363 + AluSx SINE Alu 1 300 -12 501 272 34 14 chr20 67042542 67042689 -5111193 + L2 LINE L2 3161 3310 -3 383 309 33 20 chr20 67042691 67042843 -5111039 - MIR SINE MIR -88 174 21 353 289 79 42 chr20 67042872 67043097 -5110785 + MIR SINE MIR 30 262 0 260 232 0 0 chr20 67043508 67043564 -5110318 + MER81 DNA DNA 18 73 -41 436 326 0 0 chr20 67043668 67043843 -5110039 + C-rich Low_complexity Low_complexity 1 175 0 481 202 0 0 chr20 67044068 67044162 -5109720 + MER81 DNA DNA 18 111 -3 211 356 34 25 chr20 67044303 67044421 -5109461 + MIR SINE MIR 96 214 -48 551 206 154 33 chr20 67044537 67044751 -5109131 + L2 LINE L2 2829 3068 -245 258 367 18 0 chr20 67044924 67045033 -5108849 + MIR SINE MIR 97 207 -55 228 382 41 0 chr20 67046406 67046529 -5107353 + MIR SINE MIR 95 222 -40 703 147 13 51 chr20 67046973 67047129 -5106753 - MER45A DNA AcHobo -28 150 1 330 357 9 0 chr20 67048423 67048535 -5105347 - MIR3 SINE MIR -42 166 54 406 213 12 0 chr20 67048843 67048923 -5104959 - L2 LINE L2 -6 3307 3227 216 254 17 17 chr20 67049099 67049158 -5104724 + GA-rich Low_complexity Low_complexity 1 59 0 330 201 91 22 chr20 67049232 67049369 -5104513 - MIR SINE MIR -34 174 20 245 316 0 13 chr20 67049390 67049469 -5104413 + G-rich Low_complexity Low_complexity 1 78 0 477 50 0 0 chr20 67049509 67049569 -5104313 + (TCC)n Simple_repeat Simple_repeat 3 62 0 1418 83 93 0 chr20 67049569 67049762 -5104120 - AluSg/x SINE Alu -28 284 74 518 214 19 82 chr20 67050308 67050408 -5103474 + MIR SINE MIR 2 90 -172 1667 219 185 19 chr20 67050408 67050879 -5103003 - MLT1H LTR MaLR 0 549 1 518 214 19 82 chr20 67050879 67050937 -5102945 + MIR SINE MIR 90 150 -112 478 175 233 0 chr20 67050962 67051082 -5102800 - MER4C LTR ERV1 -18 447 300 265 314 0 0 chr20 67051252 67051322 -5102560 + MIR SINE MIR 172 241 -21 401 290 46 15 chr20 67051605 67051736 -5102146 - L2 LINE L2 -2 3270 3136 193 368 60 22 chr20 67051929 67051979 -5101903 - MIR SINE MIR -2 260 213 1761 154 27 0 chr20 67051979 67052272 -5101610 - AluJb SINE Alu -11 301 1 193 368 60 22 chr20 67052272 67052403 -5101479 - MIR SINE MIR -49 213 72 801 141 7 37 chr20 67052946 67053081 -5100801 - FLAM_C SINE Alu -2 131 1 224 188 16 0 chr20 67053114 67053178 -5100704 + (CA)n Simple_repeat Simple_repeat 1 65 0 292 354 0 0 chr20 67053426 67053522 -5100360 - MIR SINE MIR -134 128 33 244 296 139 26 chr20 67053497 67053612 -5100270 - MIR SINE MIR -18 244 117 * 206 357 115 0 chr20 67053633 67053815 -5100067 + L2 LINE L2 2879 3081 -232 569 278 121 43 chr20 67053835 67054319 -5099563 - MLT1E2 LTR MaLR -7 619 1 336 221 26 13 chr20 67054579 67054656 -5099226 + MER91C DNA MER1_type 1 78 -62 450 279 150 0 chr20 67054742 67054882 -5099000 + MER5B DNA MER1_type 6 166 -12 526 335 57 16 chr20 67056169 67056363 -5097519 - MIR SINE MIR -15 247 46 238 286 0 0 chr20 67056602 67056658 -5097224 + (TTCA)n Simple_repeat Simple_repeat 1 56 0 873 247 142 25 chr20 67056719 67057155 -5096727 - L2 LINE L2 -133 3180 2699 1111 141 0 0 chr20 67057175 67057338 -5096544 + AluSp SINE Alu 137 299 -14 278 73 0 0 chr20 67057533 67057574 -5096308 + FLAM SINE Alu 85 125 -8 2034 152 0 0 chr20 67057583 67057893 -5095989 + AluJb SINE Alu 1 310 -2 2259 85 0 0 chr20 67057900 67058183 -5095699 + AluSx SINE Alu 9 291 -21 664 170 18 0 chr20 67058428 67058540 -5095342 + FRAM SINE Alu 60 173 -3 276 324 49 0 chr20 67058554 67058696 -5095186 - L2 LINE L2 -823 2491 2343 1378 220 130 2 chr20 67058696 67059096 -5094786 - MLT1C LTR MaLR 0 467 17 379 327 65 0 chr20 67059112 67059326 -5094556 - L2 LINE L2 -967 2347 2120 470 351 58 62 chr20 67059791 67060295 -5093587 + L2 LINE L2 2812 3313 0 545 272 140 36 chr20 67060703 67060953 -5092929 + L2 LINE L2 2877 3152 -161 216 0 0 0 chr20 67060961 67060985 -5092897 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 813 128 0 24 chr20 67060985 67061110 -5092772 - FLAM_C SINE Alu -21 122 1 362 239 46 18 chr20 67061178 67061287 -5092595 + MIR SINE MIR 24 135 -73 2464 150 35 6 chr20 67061635 67062098 -5091784 + LTR45B LTR ERV1 4 514 -11 317 285 62 22 chr20 67062120 67062299 -5091583 - MIR SINE MIR -39 223 38 442 301 98 0 chr20 67062355 67062488 -5091394 - MIR SINE MIR 0 262 117 1982 225 104 46 chr20 67062684 67063271 -5090611 - MLT1E3 LTR MaLR -3 621 1 1111 282 124 30 chr20 67063508 67064033 -5089849 - MLT1K LTR MaLR -10 578 5 428 261 42 0 chr20 67064555 67064697 -5089185 - MER45A DNA AcHobo 0 178 31 517 234 51 22 chr20 67065919 67066056 -5087826 + MER45A DNA AcHobo 38 178 0 353 153 0 0 chr20 67066568 67066627 -5087255 - MER6 DNA MER2_type -151 4294967289 -65 186 167 0 0 chr20 67066647 67066683 -5087199 + GA-rich Low_complexity Low_complexity 2 37 0 1666 210 15 30 chr20 67067128 67067532 -5086350 - L1MD3 LINE L1 -37 7958 7561 1051 261 90 20 chr20 67067786 67068176 -5085706 + MLT1C LTR MaLR 51 467 0 2217 106 3 3 chr20 67068562 67068863 -5085019 + AluSg SINE Alu 1 301 -9 183 239 125 45 chr20 67069064 67069152 -5084730 + MIR SINE MIR 16 110 -152 340 253 20 40 chr20 67069326 67069425 -5084457 + MIR SINE MIR 86 182 -80 512 263 29 46 chr20 67070430 67070605 -5083277 - MIR SINE MIR -71 191 20 428 187 260 0 chr20 67070645 67070795 -5083087 - MER96B DNA MER1_type? 0 417 229 364 252 14 102 chr20 67071323 67071395 -5082487 - MIR SINE MIR -21 241 187 1017 151 22 95 chr20 67071395 67071479 -5082403 + MER20 DNA MER1_type 1 90 -129 1906 153 0 14 chr20 67071479 67071773 -5082109 + AluJo SINE Alu 1 290 -22 1017 151 22 95 chr20 67071773 67071920 -5081962 + MER20 DNA MER1_type 90 215 -4 364 252 14 102 chr20 67071920 67071994 -5081888 - MIR SINE MIR -75 187 108 226 135 27 0 chr20 67072133 67072170 -5081712 + L2 LINE L2 3257 3294 -19 * 238 182 23 0 chr20 67072138 67072182 -5081700 + MIR SINE MIR 217 261 -1 454 139 13 0 chr20 67072578 67072657 -5081225 - MER53 DNA DNA -87 102 23 * 499 95 0 0 chr20 67072587 67072661 -5081221 + MER53 DNA DNA 108 181 -8 2280 47 0 0 chr20 67072725 67072981 -5080901 - AluY SINE Alu -21 290 35 990 275 100 7 chr20 67072988 67073449 -5080433 - L1ME3A LINE L1 -6 6164 5657 303 317 89 22 chr20 67073449 67073629 -5080253 + L2 LINE L2 3121 3312 -1 266 145 161 0 chr20 67074851 67074913 -5078969 + MIR SINE MIR 114 185 -77 184 125 83 0 chr20 67075068 67075116 -5078766 + CT-rich Low_complexity Low_complexity 1 52 0 207 219 24 12 chr20 67075495 67075577 -5078305 + CT-rich Low_complexity Low_complexity 5 87 0 331 267 144 0 chr20 67076718 67076808 -5077074 + L2 LINE L2 3203 3305 -8 1471 178 63 21 chr20 67076824 67077056 -5076826 + AluJo SINE Alu 1 249 -63 2383 106 30 43 chr20 67077056 67077425 -5076457 + THE1B LTR MaLR 1 364 0 1471 178 63 21 chr20 67077425 67077478 -5076404 + AluJo SINE Alu 249 298 -14 481 241 80 29 chr20 67077989 67078126 -5075756 + MER5B DNA MER1_type 29 172 -6 500 317 16 0 chr20 67078293 67078479 -5075403 - Charlie8 DNA MER1_type -2151 266 78 509 253 50 66 chr20 67078561 67078666 -5075216 - MIR SINE MIR -69 193 91 1956 192 85 41 chr20 67078666 67079150 -5074732 + MLT1D LTR MaLR 1 505 0 509 253 50 66 chr20 67079150 67079226 -5074656 - MIR SINE MIR -171 91 15 1073 207 166 68 chr20 67079812 67080252 -5073630 - MLT1J LTR MaLR -2 509 27 361 344 23 8 chr20 67080326 67080454 -5073428 + MIR3 SINE MIR 76 205 -3 709 201 84 0 chr20 67080720 67080918 -5072964 - MLT1D LTR MaLR -7 498 356 670 252 13 84 chr20 67081469 67081695 -5072187 + MIR SINE MIR 22 231 -31 2025 96 7 4 chr20 67081871 67082141 -5071741 - AluSx SINE Alu -1 311 41 205 242 168 81 chr20 67082370 67082519 -5071363 - MIR SINE MIR -1 261 100 194 229 16 49 chr20 67083260 67083321 -5070561 - MIR SINE MIR -1 261 203 1345 86 0 6 chr20 67083336 67083511 -5070371 + AluSg/x SINE Alu 131 304 -8 246 184 61 0 chr20 67083523 67083572 -5070310 - MIR SINE MIR -93 169 118 216 184 0 0 chr20 67083918 67083956 -5069926 + (TGAA)n Simple_repeat Simple_repeat 3 40 0 331 253 53 11 chr20 67084107 67084202 -5069680 + MIR SINE MIR 157 255 -7 1358 117 0 0 chr20 67084218 67084398 -5069484 - AluSg/x SINE Alu -7 305 126 2321 118 0 0 chr20 67084398 67084711 -5069171 - AluSq SINE Alu 0 313 1 348 236 126 8 chr20 67084748 67084875 -5069007 - MER113 DNA MER1_type? -316 205 64 609 234 7 0 chr20 67086173 67086318 -5067564 - MER63 DNA MER1_type -74 987 842 323 102 80 0 chr20 67086540 67086628 -5067254 + GA-rich Low_complexity Low_complexity 5 99 0 244 289 100 22 chr20 67086730 67086820 -5067062 - MIR SINE MIR -76 132 36 321 305 0 0 chr20 67086988 67087093 -5066789 - MER113 DNA MER1_type? -41 480 376 235 242 111 0 chr20 67087203 67087302 -5066580 - MER113 DNA MER1_type? -299 222 113 2319 122 8 8 chr20 67087638 67087992 -5065890 + THE1A LTR MaLR 1 354 -1 1402 175 125 38 chr20 67088527 67088882 -5065000 + L1MB2 LINE L1 5737 6132 -39 2323 76 0 57 chr20 67088882 67089199 -5064683 - AluY SINE Alu -10 301 3 1402 175 125 38 chr20 67089199 67089243 -5064639 + L1MB2 LINE L1 6132 6171 0 295 181 35 12 chr20 67089618 67089704 -5064178 + L1ME1 LINE L1 2402 2489 -3937 3278 170 17 11 chr20 67089871 67090507 -5063375 - L1 LINE L1 -3361 2785 2146 * 5959 143 13 4 chr20 67090506 67091983 -5061899 + L1PB2 LINE L1 4663 6148 -3 1376 260 31 0 chr20 67091985 67092366 -5061516 + L1ME1 LINE L1 4275 4667 -1759 27 0 0 0 chr20 67092366 67092393 -5061489 + AT_rich Low_complexity Low_complexity 1 27 0 311 169 0 13 chr20 67092847 67092924 -5060958 + CT-rich Low_complexity Low_complexity 2 77 0 2841 232 58 43 chr20 67093570 67094033 -5059849 + L1ME1 LINE L1 4654 5109 -1337 1940 130 14 3 chr20 67094033 67094325 -5059557 - AluSx SINE Alu -14 298 4 2841 232 58 43 chr20 67094325 67094600 -5059282 + L1ME1 LINE L1 5109 5379 -1067 2701 62 0 0 chr20 67094600 67094908 -5058974 + AluY SINE Alu 1 308 -3 2841 232 58 43 chr20 67094908 67095272 -5058610 + L1ME1 LINE L1 5379 5736 -710 2346 79 0 29 chr20 67095272 67095626 -5058256 + AluY SINE Alu 1 311 0 2403 102 0 0 chr20 67095630 67095933 -5057949 + AluSx SINE Alu 1 303 -9 2841 232 58 43 chr20 67095933 67096462 -5057420 + L1ME1 LINE L1 5738 6296 -150 2390 219 102 29 chr20 67096462 67097185 -5056697 - LTR39 LTR ERV1 0 783 8 557 187 78 2 chr20 67097192 67097344 -5056538 + L1ME1 LINE L1 6289 6464 0 436 178 11 44 chr20 67098094 67098184 -5055698 + AluJb SINE Alu 207 293 -19 851 161 18 42 chr20 67098249 67098417 -5055465 - AluJo SINE Alu -119 193 30 1771 165 0 60 chr20 67098436 67098601 -5055281 - AluJb SINE Alu -16 296 157 441 0 0 0 chr20 67098601 67098650 -5055232 + (TG)n Simple_repeat Simple_repeat 2 50 0 1771 165 0 60 chr20 67098650 67098799 -5055083 - AluJb SINE Alu -155 157 1 2205 113 0 0 chr20 67100061 67100352 -5053530 - AluSx SINE Alu -21 291 1 3628 166 13 30 chr20 67100450 67100470 -5053412 - L1MB3 LINE L1 -4 6179 6160 2867 124 24 0 chr20 67100470 67100888 -5052994 + MSTA LTR MaLR 1 428 0 3628 166 13 30 chr20 67100888 67101559 -5052323 - L1MB3 LINE L1 -23 6160 5500 870 172 21 31 chr20 67103317 67103509 -5050373 - MER20 DNA MER1_type 0 219 30 3272 114 37 10 chr20 67103898 67104408 -5049474 - MER1A DNA MER1_type -5 524 1 21 0 0 0 chr20 67104523 67104544 -5049338 + AT_rich Low_complexity Low_complexity 1 21 0 1617 128 113 11 chr20 67104622 67104896 -5048986 + AluSq SINE Alu 1 302 -11 186 74 56 37 chr20 67105265 67105319 -5048563 + A-rich Low_complexity Low_complexity 5 59 0 191 244 47 134 chr20 67105360 67105532 -5048350 + L2 LINE L2 3003 3159 -113 192 257 29 57 chr20 67105542 67105612 -5048270 - L2 LINE L2 0 3313 3246 334 127 32 0 chr20 67105922 67105985 -5047897 + ORSL DNA AcHobo 51 115 -160 694 226 31 6 chr20 67106747 67106906 -5046976 + MER53 DNA DNA 27 189 0 618 289 82 28 chr20 67107305 67107596 -5046286 + MLT1C LTR MaLR 146 452 -15 883 133 46 0 chr20 67108076 67108227 -5045655 + LTR39 LTR ERV1 1 158 -625 758 142 101 83 chr20 67108227 67108396 -5045486 + FRAM SINE Alu 1 172 -4 2061 167 234 43 chr20 67108396 67108453 -5045429 + LTR39 LTR ERV1 148 193 -590 2190 72 0 0 chr20 67108453 67108715 -5045167 - AluY SINE Alu -49 262 1 2170 107 0 10 chr20 67108724 67109015 -5044867 - AluSx SINE Alu -18 294 7 2061 167 234 43 chr20 67109015 67109481 -5044401 + LTR39 LTR ERV1 199 783 0 2457 49 0 3 chr20 67109686 67109995 -5043887 - AluY SINE Alu 0 308 1 637 255 13 13 chr20 67110496 67110653 -5043229 + MER58A DNA MER1_type 3 159 0 500 182 112 94 chr20 67110653 67110743 -5043139 - L1MB3 LINE L1 -748 5426 5330 2222 117 7 0 chr20 67110743 67111041 -5042841 - AluSg SINE Alu -10 300 1 500 182 112 94 chr20 67111041 67111120 -5042762 - L1MB3 LINE L1 -844 5330 5254 2122 214 145 2 chr20 67111514 67111634 -5042248 + MLT1F1 LTR MaLR 1 102 -465 1987 148 0 20 chr20 67111634 67111937 -5041945 - AluSx SINE Alu -15 297 1 2122 214 145 2 chr20 67111937 67112312 -5041570 + MLT1F1 LTR MaLR 102 567 0 1586 170 24 28 chr20 67112368 67112656 -5041226 - AluJo SINE Alu -5 307 21 1950 126 83 0 chr20 67113724 67114002 -5039880 - AluJo SINE Alu -11 301 1 591 208 79 75 chr20 67114633 67114874 -5039008 - Charlie1a DNA MER1_type -4 1451 1210 386 198 23 0 chr20 67114919 67115005 -5038877 - MER53 DNA DNA -101 88 1 2406 70 24 0 chr20 67115021 67115319 -5038563 + AluY SINE Alu 1 305 -6 1752 189 43 28 chr20 67115321 67115493 -5038389 - Charlie1a DNA MER1_type -1612 1149 981 1652 189 28 3 chr20 67115493 67115779 -5038103 - AluJo SINE Alu -19 293 1 1752 189 43 28 chr20 67115779 67116003 -5037879 - Charlie1a DNA MER1_type -1780 981 747 2390 95 0 3 chr20 67116036 67116332 -5037550 - AluSx SINE Alu -17 295 1 1534 264 71 13 chr20 67116333 67116871 -5037011 - Charlie1a DNA MER1_type -886 569 1 839 229 50 46 chr20 67117266 67117484 -5036398 - MER20 DNA MER1_type 0 219 1 295 271 74 33 chr20 67118631 67118753 -5035129 + MIR SINE MIR 19 145 -63 2200 141 0 0 chr20 67119572 67119884 -5033998 - AluJb SINE Alu 0 312 1 1883 175 3 0 chr20 67120699 67121002 -5032880 + AluJb SINE Alu 5 308 -4 2172 109 27 3 chr20 67121723 67122017 -5031865 - AluSx SINE Alu -11 301 1 928 224 9 24 chr20 67124286 67124496 -5029386 - MER3 DNA MER1_type -2 207 1 451 256 126 5 chr20 67124639 67124838 -5029044 + L1MEd LINE L1 596 818 -5301 934 204 16 56 chr20 67124855 67125105 -5028777 + L1MB5 LINE L1 38 277 -6265 447 154 24 49 chr20 67125082 67125205 -5028677 + L1MB5 LINE L1 4359 4478 -2166 * 1878 233 26 15 chr20 67125206 67125666 -5028216 + MLT1C LTR MaLR 3 467 0 3466 210 10 20 chr20 67125669 67126473 -5027409 + L1MB5 LINE L1 5809 6604 -68 231 289 112 37 chr20 67126687 67126874 -5027008 - Charlie8 DNA MER1_type -2200 217 17 204 213 21 0 chr20 67129293 67129340 -5024542 + (CCCCG)n Simple_repeat Simple_repeat 1 48 0 197 62 0 31 chr20 67129679 67129711 -5024171 + (AGGGGG)n Simple_repeat Simple_repeat 2 32 0 214 309 0 40 chr20 67129972 67130124 -5023758 + GA-rich Low_complexity Low_complexity 1 146 0 * 239 302 0 26 chr20 67130075 67130191 -5023691 + G-rich Low_complexity Low_complexity 4 116 0 208 306 0 49 chr20 67130214 67130358 -5023524 + G-rich Low_complexity Low_complexity 5 141 0 300 296 0 50 chr20 67130442 67130654 -5023228 + G-rich Low_complexity Low_complexity 1 201 0 288 231 26 13 chr20 67131974 67132052 -5021830 + L1MB5 LINE L1 6586 6664 -8 1236 229 50 31 chr20 67133927 67134390 -5019492 + MLT1B LTR MaLR 14 390 0 337 263 85 0 chr20 67135070 67135188 -5018694 - MIR SINE MIR -44 218 91 868 159 0 0 chr20 67135188 67135320 -5018562 + FLAM_C SINE Alu 1 132 -1 284 190 30 40 chr20 67135441 67135541 -5018341 + (TA)n Simple_repeat Simple_repeat 1 99 0 303 242 162 10 chr20 67135548 67135647 -5018235 + L2 LINE L2 3200 3313 0 2478 99 0 6 chr20 67135954 67136268 -5017614 - AluSx SINE Alu 0 312 1 250 308 145 0 chr20 67137141 67137258 -5016624 + MIR SINE MIR 81 214 -48 1626 135 155 25 chr20 67137459 67137814 -5016068 + MLT1D LTR MaLR 105 505 0 1225 258 119 21 chr20 67137824 67138343 -5015539 + L2 LINE L2 2017 2586 -728 572 319 58 0 chr20 67138445 67138686 -5015196 + L2 LINE L2 2820 3074 -239 827 133 0 0 chr20 67138690 67138803 -5015079 + AluJb SINE Alu 188 300 -12 1753 174 13 22 chr20 67138859 67139170 -5014712 + AluJb SINE Alu 1 308 -4 350 292 73 0 chr20 67139254 67139350 -5014532 + L2 LINE L2 3210 3312 -1 4112 103 28 2 chr20 67140412 67140977 -5012905 + LTR19B LTR ERV1 1 580 0 1115 218 85 51 chr20 67141104 67141457 -5012425 - L1MD2 LINE L1 0 6359 5995 546 226 0 0 chr20 67142184 67142321 -5011561 + CT-rich Low_complexity Low_complexity 2 138 0 195 304 51 57 chr20 67142529 67142628 -5011254 - MIR SINE MIR -109 99 19 398 257 40 20 chr20 67142909 67143057 -5010825 - LTR16C LTR ERVL -1 490 340 345 158 0 0 chr20 67143625 67143707 -5010175 + (CA)n Simple_repeat Simple_repeat 2 83 0 338 291 31 31 chr20 67143869 67143996 -5009886 - L2 LINE L2 -471 2843 2717 2215 119 3 0 chr20 67144016 67144318 -5009564 - AluSx SINE Alu -9 303 1 281 287 232 24 chr20 67145033 67145287 -5008595 + L2 LINE L2 2968 3274 -39 422 225 123 4 chr20 67146626 67146766 -5007116 + MIR SINE MIR 56 211 -51 313 291 115 81 chr20 67146813 67147047 -5006835 + MIR SINE MIR 21 262 0 771 193 125 21 chr20 67147181 67147373 -5006509 - MER20 DNA MER1_type -1 218 7 226 288 50 12 chr20 67147807 67147887 -5005995 + MIR SINE MIR 72 154 -108 375 246 34 34 chr20 67149009 67149127 -5004755 + MIR3 SINE MIR 91 208 0 380 239 110 9 chr20 67150263 67150372 -5003510 - MIR SINE MIR -70 192 73 425 278 269 30 chr20 67152853 67153188 -5000694 - L2 LINE L2 0 3313 2899 213 121 0 0 chr20 67154176 67154209 -4999673 + (TC)n Simple_repeat Simple_repeat 2 34 0 2679 55 0 3 chr20 67154929 67155240 -4998642 + AluY SINE Alu 1 310 -1 275 268 12 49 chr20 67156199 67156281 -4997601 - L2 LINE L2 -11 3302 3224 636 244 18 76 chr20 67156413 67156638 -4997244 - MIR SINE MIR -13 249 38 854 153 0 30 chr20 67156725 67156856 -4997026 - FLAM_C SINE Alu -6 127 1 233 309 222 0 chr20 67158822 67158948 -4994934 - MIR3 SINE MIR -28 180 27 358 228 11 11 chr20 67158975 67159067 -4994815 - MLT1L LTR MaLR -8 607 516 733 158 59 7 chr20 67159801 67159953 -4993929 - L1MB5 LINE L1 0 6174 6015 2279 104 0 3 chr20 67160820 67161119 -4992763 - AluSx SINE Alu -14 298 1 770 173 152 21 chr20 67161881 67162072 -4991810 - MER45C DNA AcHobo -8 945 730 479 285 79 30 chr20 67162071 67162357 -4991525 - MER45C DNA AcHobo -570 383 44 * 183 146 122 0 chr20 67162484 67162525 -4991357 + L2 LINE L2 3268 3313 0 296 98 0 59 chr20 67162570 67162621 -4991261 + MIR SINE MIR 118 165 -97 193 293 0 0 chr20 67162689 67162730 -4991152 + L2 LINE L2 3218 3258 -14 390 263 193 18 chr20 67164721 67164892 -4988990 + MIR SINE MIR 31 231 -31 326 203 152 13 chr20 67164901 67164980 -4988902 - L2 LINE L2 -28 3285 3196 222 37 0 0 chr20 67169671 67169698 -4984184 + (GA)n Simple_repeat Simple_repeat 1 27 0 422 196 10 0 chr20 67170589 67170691 -4983191 + (TG)n Simple_repeat Simple_repeat 2 104 0 198 313 0 0 chr20 67171372 67171420 -4982462 - L2 LINE L2 -9 3263 3216 279 264 0 25 chr20 67171720 67171812 -4982070 - MIR SINE MIR -66 196 109 478 351 20 5 chr20 67173402 67173604 -4980278 + MIR SINE MIR 23 227 -35 600 289 8 17 chr20 67173897 67174132 -4979750 + L1ME4a LINE L1 5617 5849 -272 892 245 3 54 chr20 67175505 67175799 -4978083 + L1MB7 LINE L1 5854 6132 -52 246 32 0 0 chr20 67175806 67175837 -4978045 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2403 49 0 0 chr20 67175839 67176125 -4977757 - AluY SINE Alu -25 286 1 563 259 93 5 chr20 67176206 67176411 -4977471 + MER113 DNA MER1_type? 264 486 -35 186 366 75 0 chr20 67176444 67176537 -4977345 - MIR SINE MIR -80 128 29 254 190 69 0 chr20 67176793 67176851 -4977031 + MIR SINE MIR 84 145 -63 229 297 0 0 chr20 67178196 67178260 -4975622 - MIR SINE MIR -2 260 197 567 158 0 0 chr20 67179488 67179615 -4974267 + CT-rich Low_complexity Low_complexity 1 127 0 244 226 43 35 chr20 67179711 67179826 -4974056 + (TCCA)n Simple_repeat Simple_repeat 3 118 0 356 287 6 0 chr20 67181371 67181545 -4972337 + (TCCA)n Simple_repeat Simple_repeat 1 175 0 367 216 17 0 chr20 67181564 67181680 -4972202 + (TGGA)n Simple_repeat Simple_repeat 1 118 0 227 226 47 0 chr20 67181694 67181800 -4972082 + (TCCA)n Simple_repeat Simple_repeat 3 113 0 181 351 218 0 chr20 67181856 67182030 -4971852 - MIR SINE MIR -1 261 50 400 312 35 50 chr20 67182497 67182699 -4971183 - MIR SINE MIR -19 243 45 314 279 17 0 chr20 67182732 67182833 -4971049 + MIR SINE MIR 30 134 -74 218 296 25 12 chr20 67183502 67183583 -4970299 - MIR SINE MIR -168 94 13 650 245 41 31 chr20 67184899 67185095 -4968787 - L1ME2 LINE L1 -9 6155 5958 686 268 71 15 chr20 67185193 67185499 -4968383 - L1ME2 LINE L1 -403 5763 5488 379 317 134 0 chr20 67185746 67185948 -4967934 + L2 LINE L2 2736 2964 -350 334 286 2 2 chr20 67186056 67186166 -4967716 - MIR SINE MIR -62 146 56 219 333 57 19 chr20 67187321 67187426 -4966456 - MER5A DNA MER1_type -1 188 80 953 251 9 9 chr20 67187494 67187713 -4966169 - MER20 DNA MER1_type 0 219 1 355 299 67 0 chr20 67187793 67187932 -4965950 - MIR SINE MIR -61 147 27 475 333 44 40 chr20 67187942 67188239 -4965643 + L2 LINE L2 2992 3289 -24 1085 292 30 10 chr20 67188263 67188704 -4965178 + MLT1J LTR MaLR 4 504 -7 396 0 0 0 chr20 67189017 67189061 -4964821 + (TCCA)n Simple_repeat Simple_repeat 4 47 0 300 330 144 30 chr20 67189064 67189461 -4964421 - L2 LINE L2 -1 3312 2871 710 253 122 68 chr20 67189623 67190018 -4963864 + LTR16C LTR ERVL 76 491 0 681 262 49 16 chr20 67190022 67190205 -4963677 - MIR SINE MIR -65 197 9 362 264 208 19 chr20 67190268 67190427 -4963455 + MER5A DNA MER1_type 1 189 0 439 290 42 31 chr20 67190531 67190724 -4963158 - L2 LINE L2 -750 2564 2370 361 279 62 16 chr20 67191737 67191866 -4962016 - L2 LINE L2 0 3272 3138 255 329 49 0 chr20 67192767 67192849 -4961033 - MIR SINE MIR 0 262 177 280 325 0 0 chr20 67193259 67193342 -4960540 + MIR SINE MIR 156 238 -24 270 111 22 0 chr20 67193369 67193414 -4960468 - MIR SINE MIR -118 144 99 211 368 187 13 chr20 67193569 67193724 -4960158 - MIR SINE MIR -79 183 2 196 300 14 29 chr20 67193869 67193939 -4959943 + MIR SINE MIR 22 90 -172 376 314 64 6 chr20 67195085 67195257 -4958625 - MIR SINE MIR -16 246 65 396 318 69 37 chr20 67195787 67196224 -4957658 - L2 LINE L2 -339 2975 2525 209 256 179 0 chr20 67196849 67196927 -4956955 - MIR SINE MIR -151 111 20 295 306 204 5 chr20 67197392 67197578 -4956304 - MIR SINE MIR -8 254 32 418 343 25 25 chr20 67198274 67198510 -4955372 - L2 LINE L2 -1 3312 3077 203 374 40 0 chr20 67199653 67199752 -4954130 + MIR SINE MIR 160 262 0 352 306 81 0 chr20 67200030 67200154 -4953728 - MIR3 SINE MIR -44 164 31 456 299 62 0 chr20 67200629 67200773 -4953109 - MIR SINE MIR -109 153 1 632 220 40 0 chr20 67200958 67201108 -4952774 + MIR SINE MIR 47 202 -60 303 295 70 32 chr20 67201886 67202071 -4951811 - MIR3 SINE MIR -63 145 6 830 184 25 10 chr20 67202244 67202440 -4951442 + MLT1D LTR MaLR 19 217 -288 204 307 15 88 chr20 67202856 67202993 -4950889 + MIR SINE MIR 8 134 -128 351 280 37 19 chr20 67203282 67203389 -4950493 + MIR SINE MIR 53 161 -101 1720 145 52 0 chr20 67203856 67204166 -4949716 + MER2 DNA MER2_type 1 326 -19 401 329 18 0 chr20 67204386 67204550 -4949332 + MLT1K LTR MaLR 405 571 -17 331 373 59 45 chr20 67205427 67205867 -4948015 + L2 LINE L2 2807 3252 -20 919 273 166 11 chr20 67206012 67206452 -4947430 + MLT1K LTR MaLR 73 580 -8 309 296 15 15 chr20 67206657 67206789 -4947093 - MLT1K LTR MaLR -28 560 429 231 188 0 0 chr20 67207089 67207137 -4946745 + (TG)n Simple_repeat Simple_repeat 1 48 0 216 284 0 14 chr20 67207200 67207274 -4946608 + (CACCC)n Simple_repeat Simple_repeat 5 77 0 2176 141 36 33 chr20 67207359 67207722 -4946160 + THE1B LTR MaLR 1 364 0 1494 216 18 68 chr20 67207968 67208295 -4945587 - MLT1A1 LTR MaLR 0 365 58 2285 76 0 19 chr20 67208295 67208610 -4945272 - AluY SINE Alu 0 311 3 1494 216 18 68 chr20 67208610 67208666 -4945216 - MLT1A1 LTR MaLR -307 58 1 810 269 6 0 chr20 67209228 67209403 -4944479 + MER45A DNA AcHobo 3 178 0 342 0 0 0 chr20 67209545 67209583 -4944299 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 12963 133 21 43 chr20 67209666 67210092 -4943790 + Tigger1 DNA MER2_type 8 442 -1976 1963 134 3 0 chr20 67210092 67210402 -4943480 + AluSp SINE Alu 1 311 0 12963 133 21 43 chr20 67210402 67212438 -4941444 + Tigger1 DNA MER2_type 442 2417 -1 2344 72 0 3 chr20 67212567 67212859 -4941023 - AluY SINE Alu -18 293 3 225 273 120 33 chr20 67214282 67214452 -4939430 - MIR3 SINE MIR -50 158 20 207 37 0 0 chr20 67215608 67215635 -4938247 - MIR SINE MIR -63 145 119 1940 129 9 47 chr20 67215679 67215996 -4937886 - AluSx SINE Alu -7 305 1 30 45 0 0 chr20 67216769 67216813 -4937069 + AT_rich Low_complexity Low_complexity 1 44 0 184 138 0 0 chr20 67217065 67217094 -4936788 + MIR SINE MIR 216 244 -18 236 271 59 35 chr20 67217120 67217205 -4936677 - HsTC2 DNA Tc2 -1811 87 1 37 39 0 0 chr20 67217330 67217381 -4936501 + AT_rich Low_complexity Low_complexity 1 51 0 253 252 173 39 chr20 67217816 67217943 -4935939 - MER5A DNA MER1_type 0 189 46 187 279 146 63 chr20 67217820 67217978 -4935904 + MER5A DNA MER1_type 19 189 0 * 471 277 66 62 chr20 67218351 67218467 -4935415 + ORSL DNA AcHobo 1 115 -160 180 0 0 0 chr20 67218467 67218487 -4935395 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 2277 83 14 0 chr20 67218491 67218770 -4935112 - AluSq SINE Alu -32 281 1 471 277 66 62 chr20 67218770 67218922 -4934960 + ORSL DNA AcHobo 117 275 0 339 245 97 9 chr20 67219504 67219635 -4934247 + MIR SINE MIR 20 154 -63 185 326 299 11 chr20 67220122 67220306 -4933576 + MIR SINE MIR 14 250 -12 276 271 113 30 chr20 67220487 67220620 -4933262 - MIR SINE MIR -79 183 40 454 265 224 35 chr20 67221648 67221971 -4931911 + L2 LINE L2 2865 3125 -147 270 95 0 0 chr20 67221971 67222013 -4931869 + (TGAA)n Simple_repeat Simple_repeat 1 42 0 1533 197 27 10 chr20 67222014 67222309 -4931573 + AluJo SINE Alu 1 300 -12 454 265 224 35 chr20 67222309 67222326 -4931556 + L2 LINE L2 3124 3272 0 2047 139 3 3 chr20 67223018 67223320 -4930562 - AluSq SINE Alu -11 302 1 544 201 151 7 chr20 67223697 67223836 -4930046 + MIR SINE MIR 30 188 -74 333 342 118 11 chr20 67224075 67224262 -4929620 + MIR SINE MIR 52 258 -4 2205 131 3 0 chr20 67224270 67224575 -4929307 - AluSx SINE Alu -6 306 1 2022 132 13 7 chr20 67225313 67225616 -4928266 - AluJb SINE Alu -7 305 1 319 299 95 0 chr20 67225812 67225949 -4927933 - MIR SINE MIR -49 213 64 770 249 21 0 chr20 67226097 67226286 -4927596 + MIR SINE MIR 8 200 -62 239 264 36 70 chr20 67226422 67226568 -4927314 - MIR SINE MIR -69 139 17 314 212 93 25 chr20 67226758 67226876 -4927006 + MER5B DNA MER1_type 50 175 -3 211 261 0 0 chr20 67227857 67227903 -4925979 + MIR SINE MIR 107 152 -110 1226 236 128 30 chr20 67228217 67228645 -4925237 - MLT1J LTR MaLR -39 472 3 557 252 58 22 chr20 67229335 67229546 -4924336 + MIR SINE MIR 36 248 -14 1479 225 72 11 chr20 67229706 67230079 -4923803 - MSTD LTR MaLR 0 396 1 614 306 73 25 chr20 67231034 67231279 -4922603 - MIR SINE MIR 0 262 6 257 92 158 40 chr20 67231521 67231597 -4922285 + Charlie5 DNA MER1_type 2444 2528 -84 1177 277 42 8 chr20 67231750 67232104 -4921778 - LTR16C LTR ERVL 0 491 126 209 312 11 11 chr20 67232234 67232327 -4921555 - MIR SINE MIR -139 123 31 5190 127 112 83 chr20 67233059 67234540 -4919342 + pTR5 LTR ERV1 743 2438 0 1197 301 85 20 chr20 67234611 67235155 -4918727 + MLT1K LTR MaLR 10 588 0 426 298 66 13 chr20 67235377 67235605 -4918277 + L1ME4a LINE L1 5645 5884 -237 1226 240 56 17 chr20 67235757 67235935 -4917947 - MLT1A2 LTR MaLR -2 372 202 306 0 0 0 chr20 67235935 67235969 -4917913 + (GA)n Simple_repeat Simple_repeat 1 34 0 1226 240 56 17 chr20 67235969 67236148 -4917734 - MLT1A2 LTR MaLR -172 202 1 1745 195 78 75 chr20 67236483 67237084 -4916798 - LTR49 LTR ERV1 -10 585 1 267 263 13 0 chr20 67237086 67237162 -4916720 + L1MB7 LINE L1 2658 2734 -3412 * 4359 200 16 15 chr20 67237131 67238265 -4915617 + L1MB7 LINE L1 5054 6184 0 1727 146 4 19 chr20 67238284 67238552 -4915330 + AluJo SINE Alu 1 264 -48 717 172 9 0 chr20 67238553 67238669 -4915213 - Ricksha DNA DNA -361 2493 2377 188 67 33 0 chr20 67238679 67238709 -4915173 + (GAAA)n Simple_repeat Simple_repeat 3 33 0 4231 224 74 85 chr20 67238721 67240726 -4913156 + L1MC3 LINE L1 21 2003 -4423 848 216 33 6 chr20 67240784 67240965 -4912917 + MLT1B LTR MaLR 2 187 -187 188 83 0 28 chr20 67240965 67241001 -4912881 + (TC)n Simple_repeat Simple_repeat 2 36 0 931 257 0 5 chr20 67241028 67241238 -4912644 + MLT1B LTR MaLR 182 390 0 2260 238 34 16 chr20 67241247 67242201 -4911681 + L1MC3 LINE L1 2125 3094 -3332 640 214 29 17 chr20 67242238 67242480 -4911402 + Ricksha DNA DNA 2 354 -1125 229 155 24 107 chr20 67242480 67242564 -4911318 + MLT2B3 LTR ERVL 9 85 -469 5677 163 38 23 chr20 67242564 67242951 -4910931 + Ricksha DNA DNA 2060 2440 -806 1868 165 19 13 chr20 67242951 67243260 -4910622 - AluJo SINE Alu 0 312 2 5677 163 38 23 chr20 67243260 67244029 -4909853 + Ricksha DNA DNA 2440 3233 -13 370 248 22 22 chr20 67243924 67244061 -4909821 - Ricksha_a DNA DNA -1019 162 26 * 3048 235 61 22 chr20 67244069 67244529 -4909353 + L1MC3 LINE L1 3143 3584 -2842 2051 160 0 6 chr20 67244529 67244842 -4909040 + AluSx SINE Alu 2 312 0 3048 235 61 22 chr20 67244842 67245432 -4908450 + L1MC3 LINE L1 3584 4234 -2192 1335 195 15 11 chr20 67245525 67245787 -4908095 + MLT1A1 LTR MaLR 103 365 0 7026 191 20 49 chr20 67245787 67247910 -4905972 + L1MC3 LINE L1 4255 4964 -1462 2378 184 12 40 chr20 67247910 67248410 -4905472 + MER66B LTR ERV1 1 486 0 7026 191 20 49 chr20 67248410 67249110 -4904772 + L1MC3 LINE L1 4964 5683 -743 * 9879 92 41 6 chr20 67249108 67250508 -4903374 + THE1B-int LTR MaLR 131 1580 0 2128 148 28 14 chr20 67250508 67250867 -4903015 + THE1B LTR MaLR 1 364 0 995 237 23 0 chr20 67250868 67251087 -4902795 - MER58A DNA MER1_type 0 224 1 232 304 39 10 chr20 67251138 67251240 -4902642 + MLT1L LTR MaLR 511 615 0 203 305 67 48 chr20 67251695 67251800 -4902082 - L2 LINE L2 -263 3050 2944 515 145 0 12 chr20 67251921 67252004 -4901878 + FRAM SINE Alu 73 154 -22 332 234 0 13 chr20 67252010 67252087 -4901795 + Tigger2 DNA MER2_type 2633 2708 -10 484 209 45 85 chr20 67252308 67252509 -4901373 + LTR16A1 LTR ERVL 265 457 0 309 290 30 0 chr20 67252514 67252614 -4901268 + MER103 DNA DNA 55 157 -9 26 0 0 0 chr20 67256078 67256104 -4897778 + AT_rich Low_complexity Low_complexity 1 26 0 228 67 0 0 chr20 67256275 67256305 -4897577 + (T)n Simple_repeat Simple_repeat 1 30 0 289 284 67 37 chr20 67257904 67258038 -4895844 + MIR SINE MIR 69 206 -56 590 212 55 0 chr20 67258658 67258804 -4895078 - L1MA10 LINE L1 -3 6331 6178 192 325 68 42 chr20 67259601 67259792 -4894090 + L2 LINE L2 2911 3106 -166 504 306 11 11 chr20 67260236 67260419 -4893463 - MER58A DNA MER1_type 0 224 42 182 244 0 0 chr20 67261090 67261131 -4892751 - MIR SINE MIR -163 99 59 235 267 78 0 chr20 67261803 67261893 -4891989 + MIR SINE MIR 50 146 -62 180 0 0 0 chr20 67262964 67262984 -4890898 + (TGGA)n Simple_repeat Simple_repeat 1 20 0 228 316 30 38 chr20 67263046 67263169 -4890713 - MIR SINE MIR -63 145 44 193 238 150 0 chr20 67263613 67263693 -4890189 + L2 LINE L2 3179 3270 -43 216 97 0 0 chr20 67264073 67264104 -4889778 + (CACCAT)n Simple_repeat Simple_repeat 5 35 0 236 285 22 22 chr20 67264752 67264931 -4888951 + (CA)n Simple_repeat Simple_repeat 2 180 0 248 264 35 11 chr20 67265061 67265235 -4888647 + (CA)n Simple_repeat Simple_repeat 2 179 0 297 291 11 11 chr20 67265257 67265432 -4888450 + (CA)n Simple_repeat Simple_repeat 2 176 0 801 195 70 15 chr20 67266539 67266739 -4887143 + MER20 DNA MER1_type 1 211 -8 244 203 34 0 chr20 67266761 67266820 -4887062 - MIR SINE MIR -108 154 94 361 262 107 0 chr20 67269640 67269743 -4884139 - MIR SINE MIR -101 161 48 181 301 44 80 chr20 67269837 67269950 -4883932 + MIR SINE MIR 33 141 -67 478 340 6 6 chr20 67270761 67270920 -4882962 - MIR SINE MIR -23 239 81 284 340 19 0 chr20 67271572 67271678 -4882204 - Charlie4 DNA MER1_type -1815 146 39 307 318 128 36 chr20 67272697 67272881 -4881001 + MIR SINE MIR 2 196 -66 508 342 130 33 chr20 67273145 67273575 -4880307 + L2 LINE L2 2837 3308 -5 2073 103 7 0 chr20 67273582 67273900 -4879982 - AluSx SINE Alu 0 320 1 231 302 12 23 chr20 67275836 67275922 -4877960 + L1MC/D LINE L1 5556 5640 -2168 269 243 14 0 chr20 67275961 67276031 -4877851 + (TA)n Simple_repeat Simple_repeat 2 72 0 717 211 44 0 chr20 67276171 67276351 -4877531 - MER20 DNA MER1_type -31 188 1 635 337 24 16 chr20 67277227 67277473 -4876409 + MIR SINE MIR 7 254 -8 1436 221 25 88 chr20 67278526 67278925 -4874957 + MLT1A2 LTR MaLR 1 374 0 227 286 32 0 chr20 67279184 67279247 -4874635 - L2 LINE L2 -14 3299 3235 364 297 28 35 chr20 67279439 67279584 -4874298 - MIR SINE MIR -19 243 100 611 302 45 22 chr20 67280607 67280829 -4873053 + MIR SINE MIR 35 261 -1 222 243 353 22 chr20 67281267 67281543 -4872339 + L2 LINE L2 2610 2973 -299 369 303 144 0 chr20 67281670 67281802 -4872080 + MIR SINE MIR 111 261 -1 252 343 59 53 chr20 67281801 67281970 -4871912 + L2 LINE L2 3144 3313 0 * 3161 182 56 42 chr20 67282067 67282820 -4871062 + L1MD2 LINE L1 5595 6357 -2 443 333 132 0 chr20 67283517 67283730 -4870152 - L2 LINE L2 -188 3125 2885 254 255 59 10 chr20 67284307 67284409 -4869473 - MIR SINE MIR -72 136 30 300 353 0 0 chr20 67284639 67284741 -4869141 - MIR SINE MIR -44 218 117 1010 173 67 24 chr20 67284768 67284976 -4868906 + MER20 DNA MER1_type 3 219 0 238 270 40 14 chr20 67284976 67285050 -4868832 + MIR SINE MIR 182 257 -5 290 363 8 24 chr20 67285203 67285327 -4868555 + L2 LINE L2 3151 3272 0 270 223 50 58 chr20 67285997 67286118 -4867764 - L1MD2 LINE L1 -5 6354 6235 265 298 121 7 chr20 67286159 67286300 -4867582 - MIR3 SINE MIR -49 159 3 * 266 385 117 3 chr20 67286300 67286580 -4867302 + L2 LINE L2 2959 3271 -1 346 261 80 0 chr20 67286745 67286833 -4867049 + MIR SINE MIR 61 155 -107 312 27 0 0 chr20 67287987 67288024 -4865858 + (TG)n Simple_repeat Simple_repeat 2 38 0 184 98 24 24 chr20 67290828 67290869 -4863013 + (TTCC)n Simple_repeat Simple_repeat 3 43 0 504 283 121 0 chr20 67290888 67291054 -4862828 + MIR SINE MIR 21 206 -56 358 369 17 11 chr20 67291087 67291266 -4862616 + MIR SINE MIR 69 248 -14 223 286 183 0 chr20 67291741 67291867 -4862015 - MIR3 SINE MIR -13 195 47 254 312 21 21 chr20 67291895 67292036 -4861846 - MER117 DNA MER1_type -20 177 37 832 177 77 48 chr20 67292737 67292946 -4860936 - MER20 DNA MER1_type 0 219 5 236 295 38 36 chr20 67293092 67293239 -4860643 - MIR SINE MIR -37 171 23 353 350 36 14 chr20 67294391 67294531 -4859351 - MIR SINE MIR -3 259 117 273 281 52 42 chr20 67295550 67295646 -4858236 + L2 LINE L2 3217 3313 0 564 282 18 12 chr20 67296548 67296711 -4857171 - MIR SINE MIR -14 248 85 417 298 76 50 chr20 67298985 67299223 -4854659 + MIR SINE MIR 6 249 -13 737 164 90 0 chr20 67299957 67300091 -4853791 + AluSq/x SINE Alu 1 146 -167 498 239 197 0 chr20 67300235 67300377 -4853505 - MER5B DNA MER1_type -8 170 1 258 298 99 39 chr20 67301689 67301870 -4852012 + MER117 DNA MER1_type 5 196 -1 342 353 96 8 chr20 67303764 67303994 -4849888 - MIR SINE MIR -12 250 1 2268 115 0 6 chr20 67305185 67305498 -4848384 + AluSx SINE Alu 1 311 -1 238 316 31 10 chr20 67306534 67306632 -4847250 + L2 LINE L2 3169 3268 -45 422 324 128 10 chr20 67307069 67307273 -4846609 + MIR SINE MIR 19 246 -16 277 274 126 7 chr20 67308560 67308695 -4845187 + Charlie8 DNA MER1_type 84 234 -2183 189 211 0 0 chr20 67309545 67309597 -4844285 + (TG)n Simple_repeat Simple_repeat 1 52 0 205 238 0 0 chr20 67310025 67310067 -4843815 + L2 LINE L2 3228 3269 -3 713 174 41 41 chr20 67310203 67310375 -4843507 + MER20 DNA MER1_type 35 206 -13 220 305 95 0 chr20 67311201 67311296 -4842586 + MIR3 SINE MIR 88 191 -17 205 298 11 53 chr20 67311398 67311492 -4842390 - MIR3 SINE MIR -32 176 87 216 158 0 0 chr20 67311658 67311696 -4842186 + CT-rich Low_complexity Low_complexity 4 41 0 35 71 0 0 chr20 67313729 67313799 -4840083 + GC_rich Low_complexity Low_complexity 1 70 0 21 0 0 0 chr20 67313973 67313994 -4839888 + GC_rich Low_complexity Low_complexity 1 21 0 60 77 0 0 chr20 67314025 67314155 -4839727 + GC_rich Low_complexity Low_complexity 1 130 0 219 36 0 0 chr20 67314351 67314379 -4839503 + (CCG)n Simple_repeat Simple_repeat 2 29 0 23 33 0 0 chr20 67314485 67314515 -4839367 + GC_rich Low_complexity Low_complexity 1 30 0 395 263 206 0 chr20 67315370 67315545 -4838337 - MIR SINE MIR -5 257 47 404 281 25 16 chr20 67316771 67316892 -4836990 + MIR SINE MIR 78 199 -63 266 240 0 125 chr20 67316930 67317034 -4836848 - MIR SINE MIR -64 198 108 369 182 8 12 chr20 67317124 67317255 -4836627 - MER53 DNA DNA 0 189 1 370 340 158 12 chr20 67317503 67317756 -4836126 - L2 LINE L2 -1 3312 3023 227 203 16 31 chr20 67318303 67318367 -4835515 + MER45 DNA AcHobo 1 63 -1518 30 27 0 0 chr20 67318379 67318416 -4835466 + AT_rich Low_complexity Low_complexity 1 37 0 291 267 0 56 chr20 67318938 67319028 -4834854 - MIR SINE MIR 0 262 178 467 262 193 0 chr20 67319060 67319205 -4834677 - MIR SINE MIR -65 197 25 284 254 43 14 chr20 67320141 67320279 -4833603 + (TG)n Simple_repeat Simple_repeat 2 143 0 328 310 16 8 chr20 67320566 67320695 -4833187 - MIR3 SINE MIR -29 179 50 505 270 48 42 chr20 67321330 67321519 -4832363 + MIR SINE MIR 68 257 -5 1744 144 14 71 chr20 67321519 67321872 -4832010 + MER44D DNA MER2_type 1 603 -6 401 217 57 28 chr20 67322342 67322448 -4831434 + L2 LINE L2 3204 3312 -1 287 273 216 11 chr20 67322517 67322865 -4831017 + L1ME4a LINE L1 5647 6065 -56 21 0 0 0 chr20 67322884 67322905 -4830977 + AT_rich Low_complexity Low_complexity 1 21 0 202 206 159 0 chr20 67323267 67323330 -4830552 + MIR SINE MIR 65 137 -125 221 171 0 24 chr20 67323352 67323393 -4830489 - L2 LINE L2 -9 3263 3224 197 319 0 0 chr20 67323639 67323686 -4830196 + L2 LINE L2 3208 3254 -18 1464 123 6 132 chr20 67323717 67324043 -4829839 + AluJo SINE Alu 1 285 -17 646 276 3 117 chr20 67324060 67324350 -4829532 - MIR SINE MIR 0 262 6 200 188 52 104 chr20 67324580 67324676 -4829206 - L2 LINE L2 -31 3241 3151 21 36 0 0 chr20 67324879 67324907 -4828975 + GC_rich Low_complexity Low_complexity 1 28 0 522 309 34 6 chr20 67325100 67325278 -4828604 + MIR SINE MIR 37 219 -43 289 317 149 12 chr20 67325274 67325435 -4828447 - L3 LINE CR1 -134 1443 1261 * 671 219 90 0 chr20 67325482 67325637 -4828245 - MER45A DNA AcHobo -9 169 1 263 283 30 40 chr20 67325842 67325941 -4827941 + MIR SINE MIR 125 222 -40 426 274 15 47 chr20 67325942 67326125 -4827757 - L1ME3 LINE L1 0 6166 5987 1097 268 29 70 chr20 67326180 67326243 -4827639 - L1ME3 LINE L1 -175 5987 5923 1935 146 17 7 chr20 67326243 67326538 -4827344 - AluJo SINE Alu -2 310 13 1097 268 29 70 chr20 67326538 67327033 -4826849 - L1ME3 LINE L1 -239 5923 5452 272 316 37 29 chr20 67327158 67327294 -4826588 - L3 LINE CR1 -867 710 574 272 304 37 37 chr20 67327506 67327641 -4826241 - MIR SINE MIR 0 262 128 267 132 0 0 chr20 67327648 67327686 -4826196 + MIR SINE MIR 112 149 -59 457 217 29 46 chr20 67327749 67327924 -4825958 + (CAGAGA)n Simple_repeat Simple_repeat 4 175 0 528 280 53 40 chr20 67327936 67328161 -4825721 + MLT1D LTR MaLR 278 505 0 1125 234 63 42 chr20 67328312 67328722 -4825160 - MLT1C LTR MaLR -43 424 6 2492 55 0 0 chr20 67328732 67329021 -4824861 - AluY SINE Alu -22 289 1 419 91 0 15 chr20 67329226 67329292 -4824590 + (TTCA)n Simple_repeat Simple_repeat 1 65 0 233 319 0 0 chr20 67329303 67329372 -4824510 - L2 LINE L2 -61 3252 3184 275 271 274 32 chr20 67329824 67330101 -4823781 + L2 LINE L2 2921 3264 -49 1995 142 18 0 chr20 67330788 67331070 -4822812 + AluJb SINE Alu 3 289 -23 454 368 47 0 chr20 67331101 67331237 -4822645 - MIR SINE MIR -29 233 82 2255 126 0 0 chr20 67331237 67331547 -4822335 - AluSx SINE Alu -2 310 1 454 368 47 0 chr20 67331547 67331622 -4822260 - MIR SINE MIR -180 82 12 198 330 99 0 chr20 67331870 67331961 -4821921 - MIR SINE MIR -59 203 104 185 323 32 21 chr20 67332270 67332363 -4821519 + MIR SINE MIR 30 123 -85 340 121 17 0 chr20 67332947 67333005 -4820877 + MIR SINE MIR 90 148 -60 218 259 45 89 chr20 67333345 67333457 -4820425 + L2 LINE L2 3202 3308 -5 1459 191 38 35 chr20 67333474 67333797 -4820085 + MER58B DNA MER1_type 1 327 -2093 1712 189 7 20 chr20 67333797 67334098 -4819784 + AluJo SINE Alu 1 297 -15 1459 191 38 35 chr20 67334098 67334114 -4819768 + MER58B DNA MER1_type 327 341 0 589 209 169 0 chr20 67334122 67334270 -4819612 - MER5B DNA MER1_type 0 178 6 244 324 45 9 chr20 67334736 67334847 -4819035 - MIR SINE MIR -139 123 9 21 0 0 0 chr20 67335103 67335124 -4818758 + AT_rich Low_complexity Low_complexity 1 21 0 646 193 28 149 chr20 67335359 67335568 -4818314 - MER20 DNA MER1_type 0 219 43 835 88 13 181 chr20 67335568 67335795 -4818087 - MER53 DNA DNA 0 189 1 646 193 28 149 chr20 67335795 67335834 -4818048 - MER20 DNA MER1_type -176 43 1 262 174 22 0 chr20 67335850 67335913 -4817969 + MIR SINE MIR 104 167 -95 2086 101 129 48 chr20 67336184 67336580 -4817302 - MSTA LTR MaLR 0 428 1 245 287 20 20 chr20 67336583 67336684 -4817198 - L2 LINE L2 -12 3260 3160 200 242 16 0 chr20 67336707 67336769 -4817113 + L2 LINE L2 2465 2527 -787 1199 237 54 8 chr20 67336810 67337164 -4816718 - L1ME2 LINE L1 -47 6117 5748 225 222 19 0 chr20 67337193 67337247 -4816635 - L1ME3A LINE L1 -13 6157 6103 * 744 216 29 0 chr20 67337238 67337446 -4816436 + L1MA4 LINE L1 6044 6257 -43 * 1636 260 54 13 chr20 67337438 67337976 -4815906 - L1ME3A LINE L1 -26 6144 5585 383 310 86 23 chr20 67337998 67338172 -4815710 + L2 LINE L2 2548 2732 -582 830 230 38 12 chr20 67338228 67338663 -4815219 - MLT1D LTR MaLR -1 504 2 613 339 18 5 chr20 67338966 67339184 -4814698 - MIR SINE MIR -11 251 31 2024 134 36 25 chr20 67339684 67340041 -4813841 - THE1B LTR MaLR -3 361 1 492 264 36 14 chr20 67340131 67340271 -4813611 - L2 LINE L2 0 3313 3171 1329 253 33 22 chr20 67340276 67340643 -4813239 - MER70B LTR ERVL -133 445 75 812 282 102 21 chr20 67340866 67341150 -4812732 - MLT1K LTR MaLR -262 326 20 296 314 25 16 chr20 67341173 67341294 -4812588 + L2 LINE L2 2216 2337 -977 337 346 43 6 chr20 67341698 67341860 -4812022 + L2 LINE L2 2915 3082 -190 416 163 0 11 chr20 67341932 67342024 -4811858 + CT-rich Low_complexity Low_complexity 3 93 0 883 151 16 32 chr20 67342495 67342681 -4811201 - MER53 DNA DNA 0 189 7 1219 247 18 32 chr20 67342729 67343235 -4810647 - MLT1E LTR MaLR 0 593 1 274 268 61 0 chr20 67343378 67343460 -4810422 + MIR SINE MIR 90 176 -86 200 226 38 0 chr20 67343755 67343808 -4810074 - L2 LINE L2 -27 3286 3232 198 330 34 11 chr20 67343834 67343922 -4809960 - MER5B DNA MER1_type -16 162 73 288 227 0 0 chr20 67343986 67344052 -4809830 - MER5A DNA MER1_type -87 102 37 2360 194 20 58 chr20 67344107 67344660 -4809222 + MLT1F1 LTR MaLR 2 533 -34 376 177 0 0 chr20 67344753 67344815 -4809067 - MER5A DNA MER1_type 0 189 128 2332 100 0 3 chr20 67344817 67345117 -4808765 + AluSg SINE Alu 1 299 -11 233 344 19 13 chr20 67345291 67345448 -4808434 + L1MC/D LINE L1 5735 5892 -1916 1101 292 59 29 chr20 67345502 67345669 -4808213 - L1ME4a LINE L1 -11 6110 5950 429 66 0 0 chr20 67345669 67345730 -4808152 + (TA)n Simple_repeat Simple_repeat 2 62 0 1101 292 59 29 chr20 67345730 67346052 -4807830 - L1ME4a LINE L1 -171 5950 5606 489 291 45 45 chr20 67346064 67346284 -4807598 + MIR SINE MIR 10 229 -33 493 316 139 0 chr20 67346386 67346595 -4807287 - MIR SINE MIR -17 245 8 232 291 99 44 chr20 67346840 67347022 -4806860 - L2 LINE L2 -229 3043 2852 326 320 25 0 chr20 67347039 67347161 -4806721 - MIR SINE MIR -118 144 20 336 202 12 0 chr20 67347190 67347274 -4806608 - Charlie8 DNA MER1_type -2252 165 81 2337 120 28 14 chr20 67347778 67348136 -4805746 - THE1B LTR MaLR -1 363 1 1046 227 5 0 chr20 67348269 67348489 -4805393 + MER58A DNA MER1_type 4 224 0 585 234 164 25 chr20 67348720 67348921 -4804961 - MIR SINE MIR -2 260 32 689 265 14 0 chr20 67349818 67349965 -4803917 - MER45A DNA AcHobo -27 151 3 987 204 19 76 chr20 67350003 67350058 -4803824 - MER33 DNA MER1_type -2289 296 239 1676 177 54 7 chr20 67350058 67350352 -4803530 + AluJb SINE Alu 1 308 -4 987 204 19 76 chr20 67350352 67350610 -4803272 - MER33 DNA MER1_type -2346 239 1 213 300 67 0 chr20 67351107 67351167 -4802715 + L2 LINE L2 3244 3307 -6 186 103 0 0 chr20 67351168 67351197 -4802685 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 233 259 59 12 chr20 67351797 67351882 -4802000 + MER113 DNA MER1_type? 11 99 -422 206 114 0 23 chr20 67351962 67352006 -4801876 + (TATAA)n Simple_repeat Simple_repeat 2 44 0 507 284 7 0 chr20 67352079 67352227 -4801655 - L1MC5 LINE L1 -97 7864 7716 809 259 142 7 chr20 67352239 67352548 -4801334 + MER113 DNA MER1_type? 101 451 -70 582 278 45 0 chr20 67352677 67352875 -4801007 + MIR SINE MIR 44 250 -12 234 150 0 0 chr20 67353315 67353355 -4800527 + (TG)n Simple_repeat Simple_repeat 1 40 0 216 200 0 0 chr20 67353939 67353989 -4799893 + GA-rich Low_complexity Low_complexity 4 53 0 3236 103 80 4 chr20 67354031 67354546 -4799336 + MER41C LTR ERV1 1 554 0 479 215 22 52 chr20 67354608 67354743 -4799139 + MIR SINE MIR 35 165 -97 187 206 29 44 chr20 67355043 67355111 -4798771 + L2 LINE L2 3017 3083 -189 21 0 0 0 chr20 67355215 67355236 -4798646 + AT_rich Low_complexity Low_complexity 1 21 0 24 53 0 0 chr20 67355418 67355456 -4798426 + AT_rich Low_complexity Low_complexity 1 38 0 419 255 43 19 chr20 67355675 67355836 -4798046 - L1MC4a LINE L1 -1897 5911 5747 1341 289 165 4 chr20 67355837 67356345 -4797537 + MLT1G LTR MaLR 1 590 0 4049 178 24 30 chr20 67356429 67356731 -4797151 - L1MB5 LINE L1 -1 6173 5871 2291 55 41 27 chr20 67356731 67357024 -4796858 - AluY SINE Alu -14 297 1 4049 178 24 30 chr20 67357024 67357073 -4796809 - L1MB5 LINE L1 -303 5871 5823 2090 137 0 19 chr20 67357073 67357386 -4796496 - AluJb SINE Alu -5 307 1 4049 178 24 30 chr20 67357386 67357864 -4796018 - L1MB5 LINE L1 -351 5823 5348 1027 239 111 24 chr20 67358532 67358829 -4795053 - L1ME3 LINE L1 -1 6161 5839 786 147 9 22 chr20 67358846 67359023 -4794859 + CT-rich Low_complexity Low_complexity 1 179 -317 2035 110 4 4 chr20 67359023 67359296 -4794586 - AluSx SINE Alu -39 273 1 786 147 9 22 chr20 67359296 67359349 -4794533 + CT-rich Low_complexity Low_complexity 179 496 0 1221 267 74 1 chr20 67359372 67359391 -4794491 - L1MC4a LINE L1 -353 5809 5793 915 203 53 0 chr20 67359391 67359598 -4794284 + MER20 DNA MER1_type 1 218 -1 1221 267 74 1 chr20 67359598 67359968 -4793914 - L1MC4a LINE L1 -369 5793 5407 231 88 0 0 chr20 67360115 67360149 -4793733 + LTR67 LTR ERVL 103 136 -421 467 276 7 33 chr20 67360494 67360646 -4793236 + L2 LINE L2 3165 3312 -1 366 284 114 60 chr20 67360673 67361007 -4792875 - MLT1K LTR MaLR -32 556 205 452 275 5 87 chr20 67361048 67361255 -4792627 - MLT1L LTR MaLR -418 197 8 1432 197 182 1 chr20 67361342 67361748 -4792134 - MLT1F1 LTR MaLR 0 542 8 260 260 175 19 chr20 67362034 67362188 -4791694 - MIR SINE MIR -14 248 71 515 353 16 23 chr20 67362378 67362636 -4791246 - MIR SINE MIR -1 261 6 267 222 25 25 chr20 67363122 67363203 -4790679 + L2 LINE L2 2198 2278 -1036 888 165 34 34 chr20 67363203 67363409 -4790473 + MER3 DNA MER1_type 1 206 -3 406 342 58 47 chr20 67363458 67363736 -4790146 - LTR16A1 LTR ERVL -30 427 147 2111 124 28 0 chr20 67363967 67364257 -4789625 - AluSx SINE Alu -9 303 6 1440 236 54 44 chr20 67364268 67364768 -4789114 - MLT1D LTR MaLR 0 505 1 317 284 228 42 chr20 67364792 67365070 -4788812 + L2 LINE L2 2383 2608 -706 1077 253 75 16 chr20 67365070 67365454 -4788428 - MLT1I LTR MaLR 0 409 3 317 284 228 42 chr20 67365454 67365604 -4788278 + L2 LINE L2 2608 2891 -423 208 239 0 0 chr20 67365837 67365883 -4787999 - L2 LINE L2 -6 3307 3262 1605 157 6 72 chr20 67365931 67366136 -4787746 - AluJo SINE Alu -14 298 120 1943 121 161 11 chr20 67366136 67366508 -4787374 - MSTA LTR MaLR 0 428 1 1605 157 6 72 chr20 67366508 67366621 -4787261 - AluJo SINE Alu -192 120 1 792 286 152 22 chr20 67367866 67368561 -4785321 - L2 LINE L2 -142 3171 2376 2201 127 14 27 chr20 67368577 67368946 -4784936 - THE1B LTR MaLR 0 364 1 461 244 122 18 chr20 67369054 67369218 -4784664 + MIR SINE MIR 82 262 0 2737 214 73 84 chr20 67369404 67370225 -4783657 - L1ME LINE L1 -2620 3460 2653 2403 95 0 0 chr20 67370225 67370529 -4783353 + AluY SINE Alu 1 304 -7 2737 214 73 84 chr20 67370529 67370843 -4783039 - L1ME LINE L1 -3427 2653 2337 312 304 39 20 chr20 67370844 67370946 -4782936 + L1MEc LINE L1 1993 2096 -4300 1978 257 66 94 chr20 67370960 67371321 -4782561 - L1ME LINE L1 -3874 2387 2017 1618 189 3 21 chr20 67371321 67371612 -4782270 + AluJb SINE Alu 14 299 -13 1978 257 66 94 chr20 67371612 67373036 -4780846 - L1ME LINE L1 -4244 2017 652 1961 131 23 57 chr20 67373076 67373421 -4780461 + THE1C LTR MaLR 1 334 -41 2192 109 3 0 chr20 67373421 67373735 -4780147 - AluSp SINE Alu 0 316 2 1961 131 23 57 chr20 67373735 67373776 -4780106 + THE1C LTR MaLR 334 375 0 1411 187 119 3 chr20 67373776 67374086 -4779796 + MLT1D LTR MaLR 30 375 -130 445 191 21 0 chr20 67374078 67374172 -4779710 + MLT1D LTR MaLR 531 626 0 * 705 205 51 0 chr20 67374172 67374328 -4779554 - L1ME LINE L1 -5450 620 457 295 259 59 0 chr20 67374588 67374673 -4779209 + MIR SINE MIR 48 137 -125 1980 103 59 38 chr20 67375015 67375305 -4778577 + AluSg SINE Alu 1 296 -14 299 322 78 47 chr20 67375417 67375839 -4778043 - L2 LINE L2 -2 3270 2836 678 168 0 67 chr20 67375851 67376000 -4777882 + MER53 DNA DNA 1 139 -50 1666 149 14 18 chr20 67376013 67376289 -4777593 + AluJo SINE Alu 13 287 -25 2295 121 0 0 chr20 67376303 67376609 -4777273 + AluSq SINE Alu 1 306 -7 280 192 26 26 chr20 67376610 67376688 -4777194 + MER53 DNA DNA 112 189 0 1698 162 0 19 chr20 67377335 67377606 -4776276 + AluJo SINE Alu 1 266 -46 342 248 115 9 chr20 67377607 67377720 -4776162 + MIR SINE MIR 132 256 -6 890 282 133 7 chr20 67377779 67378080 -4775802 - MER58B DNA MER1_type -2 339 1 386 233 0 12 chr20 67378378 67378464 -4775418 - MER81 DNA DNA -25 89 5 265 86 0 0 chr20 67378655 67378690 -4775192 + U2 snRNA snRNA 2 36 -152 413 228 0 81 chr20 67378937 67379060 -4774822 - MER81 DNA DNA -1 113 1 244 269 108 0 chr20 67379184 67379277 -4774605 + MIR SINE MIR 50 152 -56 532 287 66 69 chr20 67380392 67381250 -4772632 - L1M LINE L1 -758 5388 4573 4691 159 70 20 chr20 67381424 67381864 -4772018 - L1MA7 LINE L1 -2 6289 5872 2210 118 0 10 chr20 67381864 67382170 -4771712 - AluSx SINE Alu -9 303 1 4691 159 70 20 chr20 67382170 67382209 -4771673 - L1MA7 LINE L1 -419 5872 5836 315 0 0 0 chr20 67382209 67382244 -4771638 + (TA)n Simple_repeat Simple_repeat 2 36 0 4691 159 70 20 chr20 67382244 67382663 -4771219 - L1MA7 LINE L1 -455 5836 5439 1503 149 0 0 chr20 67382663 67382878 -4771004 + AluSg/x SINE Alu 90 304 -8 4691 159 70 20 chr20 67382878 67383257 -4770625 - L1MA7 LINE L1 -852 5439 4948 326 265 61 68 chr20 67383973 67384120 -4769762 + L2 LINE L2 3168 3313 0 893 163 6 0 chr20 67385256 67385434 -4768448 + (TCCA)n Simple_repeat Simple_repeat 1 179 0 1140 119 0 0 chr20 67385446 67385623 -4768259 + (TCCA)n Simple_repeat Simple_repeat 4 180 0 209 315 6 0 chr20 67385658 67385823 -4768059 + (TCCA)n Simple_repeat Simple_repeat 3 168 0 297 151 0 0 chr20 67385852 67385905 -4767977 + (ATGGTG)n Simple_repeat Simple_repeat 4 56 0 410 337 29 6 chr20 67385960 67386135 -4767747 + MIR SINE MIR 29 207 -55 263 221 179 11 chr20 67386294 67386389 -4767493 - L2 LINE L2 -3 3310 3200 585 255 14 57 chr20 67388017 67388229 -4765653 + LTR16C LTR ERVL 289 491 0 447 236 37 47 chr20 67388394 67388543 -4765339 - MIR SINE MIR -60 148 33 329 285 257 14 chr20 67388831 67389185 -4764697 - L2 LINE L2 0 3313 2874 296 265 98 20 chr20 67389785 67389887 -4763995 - MIR SINE MIR -48 214 105 1850 163 0 10 chr20 67389998 67390292 -4763590 + AluJo SINE Alu 7 297 -15 494 227 78 0 chr20 67390696 67390824 -4763058 + MIR SINE MIR 47 184 -78 514 222 9 0 chr20 67391028 67391136 -4762746 - MER45A DNA AcHobo -29 149 41 377 190 25 41 chr20 67391204 67391325 -4762557 - L1M4 LINE L1 -785 5361 5243 468 291 0 17 chr20 67392383 67392607 -4761275 + G-rich Low_complexity Low_complexity 1 220 0 292 234 57 32 chr20 67392768 67392926 -4760956 + L2 LINE L2 2818 2979 -293 216 300 0 0 chr20 67393347 67393407 -4760475 + GA-rich Low_complexity Low_complexity 4 63 0 224 182 109 0 chr20 67393495 67393550 -4760332 + MIR SINE MIR 85 145 -117 697 256 142 6 chr20 67393700 67394079 -4759803 + MER45B DNA AcHobo 63 515 -525 1942 199 46 16 chr20 67394262 67394693 -4759189 + MER45B DNA AcHobo 594 1037 -3 457 259 14 27 chr20 67394811 67394958 -4758924 - MIR SINE MIR -21 241 97 1136 281 76 38 chr20 67395899 67396367 -4757515 - L1ME3 LINE L1 -2 6160 5665 270 73 0 0 chr20 67396399 67396440 -4757442 + (CA)n Simple_repeat Simple_repeat 1 41 0 543 291 144 30 chr20 67398231 67398592 -4755290 + MLT1L LTR MaLR 205 606 -9 1282 239 55 14 chr20 67398684 67399031 -4754851 - MER31B LTR ERV1 -104 362 2 1025 290 27 3 chr20 67399031 67399327 -4754555 + LTR16A LTR ERVL 89 391 -59 214 280 27 13 chr20 67399759 67399834 -4754048 - MIR SINE MIR -91 171 96 * 415 302 22 22 chr20 67399826 67399983 -4753899 + MIR SINE MIR 6 163 -45 393 321 110 19 chr20 67399997 67400206 -4753676 + MIR SINE MIR 35 262 0 225 252 0 0 chr20 67400649 67400768 -4753114 + (TG)n Simple_repeat Simple_repeat 1 119 0 246 333 0 0 chr20 67400780 67400882 -4753000 + (TG)n Simple_repeat Simple_repeat 1 102 0 2280 103 3 3 chr20 67400935 67401236 -4752646 - AluSq SINE Alu -12 301 1 321 281 61 53 chr20 67401279 67401393 -4752489 - L1ME4a LINE L1 -5 6116 6002 227 261 189 48 chr20 67401399 67401732 -4752150 - L1MC4a LINE L1 -1606 6202 5823 1371 149 57 36 chr20 67401762 67402010 -4751872 + AluJo SINE Alu 29 281 -31 439 251 91 65 chr20 67402010 67402209 -4751673 - L1ME4a LINE L1 -153 5968 5765 836 328 36 12 chr20 67402210 67402622 -4751260 - L1ME4a LINE L1 -148 5973 5552 402 324 9 58 chr20 67403008 67403233 -4750649 - MIR SINE MIR 0 262 49 464 300 56 30 chr20 67403351 67403990 -4749892 - L1MC4 LINE L1 -153 7889 7098 267 310 70 28 chr20 67404384 67404526 -4749356 + MIR SINE MIR 23 170 -92 1049 297 60 30 chr20 67404656 67405181 -4748701 - MLT1K LTR MaLR 0 588 11 2191 115 3 3 chr20 67405792 67406087 -4747795 - AluSq SINE Alu -18 295 1 1361 141 176 19 chr20 67406352 67406608 -4747274 - AluJb SINE Alu -2 300 5 264 362 61 4 chr20 67406608 67406887 -4746995 + L2 LINE L2 2683 2977 -337 239 54 27 0 chr20 67407058 67407095 -4746787 + (GA)n Simple_repeat Simple_repeat 1 38 0 189 283 19 0 chr20 67407120 67407173 -4746709 + L2 LINE L2 3214 3267 -5 1221 236 50 12 chr20 67407245 67407584 -4746298 - L1MD2 LINE L1 -1 6358 6007 275 316 53 9 chr20 67408090 67408204 -4745678 + LTR67 LTR ERVL 428 546 -11 1078 252 188 14 chr20 67409415 67410087 -4743795 + L2 LINE L2 2521 3312 -1 764 281 142 17 chr20 67410306 67410608 -4743274 - MLT1K LTR MaLR -16 572 233 525 259 134 62 chr20 67411457 67411831 -4742051 + LTR16C LTR ERVL 89 489 -2 332 264 88 50 chr20 67411888 67412070 -4741812 - MIR SINE MIR -72 190 2 265 241 0 0 chr20 67412299 67412357 -4741525 + (TG)n Simple_repeat Simple_repeat 1 58 0 402 244 0 0 chr20 67413899 67413981 -4739901 + L2 LINE L2 3232 3313 0 * 417 278 8 23 chr20 67413979 67414112 -4739770 - MIR SINE MIR -84 178 48 642 243 7 21 chr20 67414907 67415051 -4738831 + MIR SINE MIR 74 215 -47 522 247 84 57 chr20 67415160 67415423 -4738459 - MLT1J LTR MaLR 0 511 242 655 253 139 18 chr20 67415543 67415816 -4738066 + LTR16C LTR ERVL 186 491 0 221 265 174 10 chr20 67416120 67416218 -4737664 - L2 LINE L2 -1 3312 3199 2295 99 0 3 chr20 67416380 67416740 -4737142 - AluSq SINE Alu 0 359 1 4443 104 19 10 chr20 67416742 67417427 -4736455 - L1PA14 LINE L1 -2 6159 5469 430 131 103 37 chr20 67417437 67417544 -4736338 - L1PA13 LINE L1 -18 6145 6032 367 127 63 0 chr20 67417544 67417607 -4736275 - HSMAR2 DNA Mariner -1046 256 190 231 196 59 0 chr20 67417786 67417837 -4736045 + MLT2B2 LTR ERVL 462 515 0 193 150 50 0 chr20 67417848 67417888 -4735994 - MIR3 SINE MIR -49 159 118 791 214 68 15 chr20 67418087 67418293 -4735589 + MER20 DNA MER1_type 3 219 0 256 263 177 20 chr20 67418369 67418567 -4735315 + MLT1K LTR MaLR 10 238 -350 356 310 237 9 chr20 67418910 67419239 -4734643 - MLT1K LTR MaLR -37 551 148 374 326 8 8 chr20 67419670 67419799 -4734083 - MIR SINE MIR -106 156 28 1464 227 38 30 chr20 67419803 67420199 -4733683 - MLT2C2 LTR ERVL -65 399 1 552 283 161 33 chr20 67420444 67420748 -4733134 - MLT1I LTR MaLR -1 408 66 246 371 67 0 chr20 67420859 67421069 -4732813 - L1MC/D LINE L1 -1890 5918 5695 7818 117 26 11 chr20 67421233 67422512 -4731370 - HSMAR2 DNA Mariner -1 1301 4 23 0 0 0 chr20 67422563 67422586 -4731296 + AT_rich Low_complexity Low_complexity 1 23 0 319 317 49 66 chr20 67422594 67422777 -4731105 - HAL1 LINE L1 -33 2474 2295 271 255 47 47 chr20 67424635 67424741 -4729141 - MIR SINE MIR -139 123 18 321 279 44 37 chr20 67424801 67424937 -4728945 - MIR SINE MIR -47 215 79 302 329 0 0 chr20 67424914 67424999 -4728883 - L2 LINE L2 0 3272 3188 * 221 309 0 0 chr20 67425019 67425074 -4728808 + (TG)n Simple_repeat Simple_repeat 2 56 0 237 279 41 75 chr20 67425140 67425287 -4728595 - L2 LINE L2 -251 3062 2921 880 273 65 48 chr20 67425851 67426206 -4727676 + L2 LINE L2 2912 3272 0 475 290 111 39 chr20 67426219 67426426 -4727456 + L3 LINE CR1 1262 1483 -94 217 302 85 23 chr20 67426423 67426552 -4727330 + L2 LINE L2 3136 3272 0 * 948 161 88 35 chr20 67426656 67426916 -4726966 + MER33 DNA MER1_type 51 324 0 335 250 40 0 chr20 67426972 67427048 -4726834 + Tigger3(Golem) DNA MER2_type 1 79 -2950 6641 135 21 36 chr20 67427165 67427627 -4726255 - Tigger3(Golem) DNA MER2_type 0 3029 2561 2204 135 0 3 chr20 67427627 67427938 -4725944 - AluSq SINE Alu -3 310 1 6641 135 21 36 chr20 67427938 67428612 -4725270 - Tigger3(Golem) DNA MER2_type -468 2561 1911 1701 171 20 27 chr20 67428612 67428911 -4724971 - AluJb SINE Alu -12 300 4 6641 135 21 36 chr20 67428911 67429014 -4724868 - Tigger3(Golem) DNA MER2_type -1118 1911 1808 530 216 20 0 chr20 67429003 67429105 -4724777 - Tigger3(Golem) DNA MER2_type -2923 106 3 * 665 137 29 0 chr20 67429130 67429232 -4724650 + Tigger3(Golem) DNA MER2_type 2925 3029 0 21 0 0 0 chr20 67429609 67429630 -4724252 + AT_rich Low_complexity Low_complexity 1 21 0 363 325 72 38 chr20 67429852 67430089 -4723793 + L1MC4a LINE L1 5679 5923 -1885 473 311 63 45 chr20 67431200 67431599 -4722283 - MLT1K LTR MaLR -19 569 164 360 218 46 75 chr20 67431634 67431757 -4722125 + MER53 DNA DNA 1 119 -70 2491 84 0 3 chr20 67431757 67432066 -4721816 + AluSx SINE Alu 1 308 -4 360 218 46 75 chr20 67432066 67432116 -4721766 + MER53 DNA DNA 119 169 -20 275 164 16 0 chr20 67432180 67432241 -4721641 + MER53 DNA DNA 125 186 -3 249 336 25 8 chr20 67432975 67433094 -4720788 + MIR SINE MIR 33 153 -109 288 0 0 0 chr20 67433551 67433583 -4720299 + (CAGGG)n Simple_repeat Simple_repeat 3 34 0 321 265 46 119 chr20 67433711 67433862 -4720020 - L1ME4a LINE L1 -13 6108 5969 292 288 45 9 chr20 67433868 67433979 -4719903 - L2 LINE L2 -5 3267 3153 864 256 83 83 chr20 67434041 67434499 -4719383 + MLT2C2 LTR ERVL 1 458 -6 199 219 49 0 chr20 67434537 67434578 -4719304 - L2 LINE L2 -5 3267 3225 1251 229 131 15 chr20 67434894 67435291 -4718591 - MLT2B1 LTR ERVL 0 520 78 375 191 83 0 chr20 67435289 67435373 -4718509 - MLT1K LTR MaLR -376 91 1 * 260 287 178 10 chr20 67435529 67435630 -4718252 + MIR SINE MIR 22 139 -123 183 231 0 0 chr20 67435708 67435747 -4718135 + MIR SINE MIR 108 146 -62 294 308 26 34 chr20 67436412 67436529 -4717353 - L2 LINE L2 0 3313 3198 411 220 10 60 chr20 67436562 67436662 -4717220 - L2 LINE L2 -27 3245 3151 203 287 96 9 chr20 67436799 67436914 -4716968 + MIR SINE MIR 14 138 -124 2270 102 3 29 chr20 67437030 67437344 -4716538 - AluSx SINE Alu -6 306 1 251 231 44 50 chr20 67439037 67439171 -4714711 + MIR SINE MIR 54 185 -77 1075 223 190 10 chr20 67439222 67439617 -4714265 - MLT1C LTR MaLR -1 466 1 354 258 133 8 chr20 67439645 67439765 -4714117 - MIR SINE MIR -89 173 39 280 252 14 0 chr20 67440453 67440552 -4713330 + MIR SINE MIR 43 145 -63 220 129 0 0 chr20 67441010 67441041 -4712841 - L2 LINE L2 -19 3294 3264 288 354 31 16 chr20 67441433 67441560 -4712322 - MIR SINE MIR -15 247 119 1199 224 54 79 chr20 67441575 67442093 -4711789 + MLT1D LTR MaLR 1 505 0 521 319 105 22 chr20 67442129 67442499 -4711383 + MLT1K LTR MaLR 182 582 -6 419 268 85 7 chr20 67442620 67442674 -4711208 - MIR3 SINE MIR 0 208 160 1617 165 59 0 chr20 67442674 67442947 -4710935 - AluJb SINE Alu -23 289 1 419 268 85 7 chr20 67442947 67443045 -4710837 - MIR3 SINE MIR -48 160 44 264 267 194 30 chr20 67443746 67443911 -4709971 - MIR SINE MIR -11 251 60 348 307 74 0 chr20 67443930 67444065 -4709817 - MIR SINE MIR -63 145 9 197 204 0 0 chr20 67444201 67444245 -4709637 - L2 LINE L2 -445 2868 2825 223 327 101 31 chr20 67444816 67444975 -4708907 - L2 LINE L2 -1 3312 3143 423 288 22 7 chr20 67445117 67445256 -4708626 - MIR SINE MIR -118 144 4 240 259 35 0 chr20 67445631 67445689 -4708193 - MER5C DNA MER1_type -218 106 47 2342 68 0 0 chr20 67446584 67446904 -4706978 - AluY SINE Alu 0 320 1 194 195 24 0 chr20 67448106 67448147 -4705735 + MIR SINE MIR 102 143 -119 244 307 79 45 chr20 67448972 67449239 -4704643 - L2 LINE L2 -193 3079 2804 223 213 21 0 chr20 67449343 67449390 -4704492 + CT-rich Low_complexity Low_complexity 4 51 0 472 241 0 9 chr20 67449841 67449949 -4703933 + MLT1K LTR MaLR 144 250 -338 2299 181 27 47 chr20 67450030 67450545 -4703337 + MLT1D LTR MaLR 1 505 0 1603 258 58 0 chr20 67450968 67451448 -4702434 - L1ME3 LINE L1 -51 6111 5604 988 227 69 105 chr20 67451454 67451497 -4702385 - HAL1b LINE L1 -684 664 621 2646 130 26 7 chr20 67451497 67451921 -4701961 - MSTB1 LTR MaLR 0 432 1 988 227 69 105 chr20 67451921 67451946 -4701936 - HAL1b LINE L1 -727 621 597 2253 131 0 0 chr20 67451946 67452251 -4701631 - AluSx SINE Alu -7 305 1 988 227 69 105 chr20 67452251 67452706 -4701176 - HAL1b LINE L1 -751 597 159 225 132 0 0 chr20 67452768 67452806 -4701076 + (T)n Simple_repeat Simple_repeat 1 38 0 386 217 0 9 chr20 67453117 67453223 -4700659 + CT-rich Low_complexity Low_complexity 4 108 0 1607 151 110 62 chr20 67453262 67453634 -4700248 + MLT1B LTR MaLR 1 390 0 2167 121 36 15 chr20 67453977 67454307 -4699575 + MER1B DNA MER1_type 1 337 0 2299 114 0 3 chr20 67454722 67455029 -4698853 - AluSx SINE Alu -6 306 1 228 163 0 0 chr20 67455353 67455396 -4698486 + GA-rich Low_complexity Low_complexity 3 45 0 625 227 33 13 chr20 67455396 67455546 -4698336 - MLT1A1 LTR MaLR -1 364 212 227 327 86 37 chr20 67455570 67455732 -4698150 + MIR SINE MIR 21 190 -72 287 49 24 0 chr20 67456175 67456216 -4697666 + (TA)n Simple_repeat Simple_repeat 1 42 0 235 264 0 19 chr20 67456827 67456880 -4697002 - L2 LINE L2 -87 3185 3134 294 315 120 0 chr20 67456974 67457174 -4696708 - MIR SINE MIR -2 260 37 3298 238 66 27 chr20 67457202 67458522 -4695360 - L1MEc LINE L1 -2899 3316 1967 1654 243 104 32 chr20 67458522 67459082 -4694800 - MLT1E1 LTR MaLR -2 652 53 1016 296 40 35 chr20 67459090 67459695 -4694187 - L1MEc LINE L1 -4423 1973 1366 202 260 178 0 chr20 67459712 67459785 -4694097 + L2 LINE L2 3223 3308 -5 640 256 72 22 chr20 67459811 67459991 -4693891 + MIR SINE MIR 5 193 -69 1920 175 48 0 chr20 67460346 67460678 -4693204 - MER7A DNA MER2_type 0 346 1 346 348 27 0 chr20 67460954 67461066 -4692816 - L2 LINE L2 -14 3299 3185 766 117 18 18 chr20 67461645 67461877 -4692005 + (TCTA)n Simple_repeat Simple_repeat 1 232 0 4391 212 51 10 chr20 67462217 67464171 -4689711 - L1MB7 LINE L1 -2 6182 4143 680 167 177 38 chr20 67464265 67464451 -4689431 - L1ME3A LINE L1 -20 6150 5939 254 224 35 17 chr20 67464752 67464810 -4689072 + L2 LINE L2 3250 3308 -5 466 343 59 35 chr20 67464956 67465297 -4688585 + LTR16A LTR ERVL 97 445 -5 221 298 69 61 chr20 67465356 67465487 -4688395 + L2 LINE L2 3140 3271 -1 2242 158 128 20 chr20 67465513 67465858 -4688024 - Charlie1 DNA MER1_type -1 2760 2454 930 170 30 162 chr20 67465858 67466129 -4687753 + MER8 DNA MER2_type 4 238 -1 2242 158 128 20 chr20 67466129 67466340 -4687542 - Charlie1 DNA MER1_type -307 2454 2144 290 313 0 12 chr20 67466331 67466411 -4687471 - Charlie1 DNA MER1_type -2682 79 1 * 290 337 142 0 chr20 67466433 67466602 -4687280 + MIR SINE MIR 70 262 0 257 240 178 47 chr20 67467214 67467288 -4686594 + MIR SINE MIR 117 180 -82 1859 111 12 0 chr20 67467288 67467540 -4686342 + AluSg SINE Alu 44 298 -12 257 240 178 47 chr20 67467540 67467594 -4686288 + MIR SINE MIR 180 262 0 34 0 0 0 chr20 67467595 67467629 -4686253 + AT_rich Low_complexity Low_complexity 1 34 0 228 345 12 24 chr20 67467756 67467840 -4686042 - MIR SINE MIR -59 149 67 2755 263 34 0 chr20 67468176 67469050 -4684832 - L1MB7 LINE L1 -2821 3325 2422 * 2940 205 97 112 chr20 67469040 67469632 -4684250 - L1MCb LINE L1 -4216 2348 1749 1146 107 0 0 chr20 67469632 67469809 -4684073 + (TCTCC)n Simple_repeat Simple_repeat 1 177 0 2940 205 97 112 chr20 67469809 67470519 -4683363 - L1MCb LINE L1 -4815 1749 1030 267 235 0 0 chr20 67470519 67470570 -4683312 + MLT1E1 LTR MaLR 394 444 -210 2940 205 97 112 chr20 67470570 67471598 -4682284 - L1MCb LINE L1 -5534 1030 5 261 240 40 0 chr20 67471928 67472003 -4681879 - MER96 DNA MER1_type? -97 78 1 809 276 53 4 chr20 67472003 67472228 -4681654 + MIR SINE MIR 17 252 -10 304 305 59 17 chr20 67472969 67473087 -4680795 + MIR SINE MIR 13 135 -127 215 299 0 39 chr20 67474302 67474379 -4679503 - MIR SINE MIR -161 101 28 2320 105 19 38 chr20 67476480 67476522 -4677360 - THE1B LTR MaLR 0 364 323 2290 108 0 3 chr20 67476522 67476817 -4677065 + AluSg SINE Alu 1 294 -16 2320 105 19 38 chr20 67476817 67477145 -4676737 - THE1B LTR MaLR -41 323 1 216 296 182 15 chr20 67477156 67477190 -4676692 + MIR SINE MIR 77 104 -158 419 294 0 0 chr20 67477190 67477299 -4676583 - MER81 DNA DNA -1 113 5 216 296 182 15 chr20 67477299 67477396 -4676486 + MIR SINE MIR 104 230 -32 264 304 0 0 chr20 67477915 67478007 -4675875 + (CAAGT)n Simple_repeat Simple_repeat 5 96 0 210 360 9 9 chr20 67478347 67478461 -4675421 + MIR SINE MIR 137 250 -12 199 297 62 0 chr20 67478746 67478810 -4675072 + L3 LINE CR1 1357 1424 -153 215 252 236 0 chr20 67479003 67479130 -4674752 + MIR SINE MIR 17 173 -89 729 196 65 200 chr20 67479133 67479256 -4674626 - MLT1D LTR MaLR -1 504 366 1657 137 11 22 chr20 67479256 67479527 -4674355 + AluJb SINE Alu 37 304 -8 729 196 65 200 chr20 67479527 67479863 -4674019 - MLT1D LTR MaLR -139 366 69 542 300 36 14 chr20 67479905 67480128 -4673754 + MIR SINE MIR 28 255 -7 876 284 21 4 chr20 67480890 67481126 -4672756 + MIR SINE MIR 2 241 -21 469 211 49 8 chr20 67482685 67482808 -4671074 - L1ME2 LINE L1 -16 6148 6021 237 294 252 8 chr20 67483608 67483727 -4670155 + L2 LINE L2 2906 3053 -219 464 259 86 46 chr20 67486065 67486239 -4667643 - MIR SINE MIR -25 237 57 307 206 0 0 chr20 67486900 67486963 -4666919 - MER5A DNA MER1_type -80 109 47 2451 259 90 68 chr20 67487489 67488248 -4665634 - L1MC4 LINE L1 0 8042 7302 2551 141 26 5 chr20 67488248 67488667 -4665215 + MSTA LTR MaLR 1 428 0 2451 259 90 68 chr20 67488667 67488860 -4665022 - L1MC4 LINE L1 -740 7302 7115 204 40 0 0 chr20 67488860 67488885 -4664997 + (TTCA)n Simple_repeat Simple_repeat 3 27 0 2451 259 90 68 chr20 67488885 67489308 -4664574 - L1MC4 LINE L1 -927 7115 6635 277 269 100 54 chr20 67489460 67489667 -4664215 + LTR16A1 LTR ERVL 143 356 -94 294 343 42 19 chr20 67489729 67489942 -4663940 - L1MC4a LINE L1 -1245 6563 6346 23 54 0 0 chr20 67490005 67490042 -4663840 + AT_rich Low_complexity Low_complexity 1 37 0 192 320 41 52 chr20 67490187 67490284 -4663598 - MIR3 SINE MIR -46 162 67 375 236 11 56 chr20 67490287 67490307 -4663575 - L1MC4 LINE L1 -1339 6983 6964 2292 118 16 8 chr20 67490307 67490673 -4663209 - L1PB1 LINE L1 -2 6149 5781 375 236 11 56 chr20 67490673 67490762 -4663120 - L1MC4 LINE L1 -1358 6964 1992 216 125 0 75 chr20 67490771 67490851 -4663031 + (TA)n Simple_repeat Simple_repeat 1 74 0 208 0 0 36 chr20 67490851 67490879 -4663003 + (CA)n Simple_repeat Simple_repeat 1 27 0 5532 168 7 9 chr20 67490879 67492547 -4661335 - L1P5 LINE L1 -361 5790 4127 2239 263 82 41 chr20 67492548 67493481 -4660401 - L1MC4a LINE L1 -1523 6285 5315 2373 93 3 6 chr20 67493531 67493844 -4660038 - AluSx SINE Alu 0 312 1 2398 105 0 0 chr20 67493844 67494147 -4659735 - AluSg SINE Alu -6 304 1 600 326 85 6 chr20 67494148 67494479 -4659403 - L1MC4a LINE L1 -884 5262 4906 2573 165 20 5 chr20 67494556 67494998 -4658884 - MER66A LTR ERV1 -2 476 28 333 216 173 25 chr20 67495345 67495507 -4658375 + L2 LINE L2 2569 2754 -560 856 197 54 132 chr20 67496257 67496629 -4657253 - MLT2D LTR ERVL 0 414 80 522 226 15 66 chr20 67496629 67496766 -4657116 - FLAM_C SINE Alu -1 132 3 856 197 54 132 chr20 67496766 67496834 -4657048 - MLT2D LTR ERVL -334 80 8 199 356 17 35 chr20 67496943 67497058 -4656824 + L2 LINE L2 3143 3255 -17 461 88 22 22 chr20 67498944 67499035 -4654847 + (GGAA)n Simple_repeat Simple_repeat 3 93 0 847 119 53 3 chr20 67499051 67499337 -4654545 + GA-rich Low_complexity Low_complexity 1 300 0 402 243 93 43 chr20 67499558 67499698 -4654184 - MIR SINE MIR -34 228 82 359 294 120 0 chr20 67501295 67501479 -4652403 + LTR16C LTR ERVL 285 490 -1 629 214 130 5 chr20 67501496 67501688 -4652194 - MER20 DNA MER1_type -2 217 2 234 62 0 0 chr20 67501952 67501984 -4651898 + (CA)n Simple_repeat Simple_repeat 1 32 0 200 313 15 0 chr20 67502631 67502698 -4651184 - MIR SINE MIR -9 253 186 * 241 313 54 36 chr20 67502695 67502807 -4651075 + L2 LINE L2 3141 3254 -18 438 333 6 12 chr20 67502830 67503001 -4650881 - MIR SINE MIR -80 182 13 2129 189 44 30 chr20 67503238 67503710 -4650172 - MLT1D LTR MaLR 0 505 24 1180 170 74 139 chr20 67503710 67504170 -4649712 - MSTB1 LTR MaLR -1 431 2 2129 189 44 30 chr20 67504170 67504195 -4649687 - MLT1D LTR MaLR -481 24 1 1225 246 55 19 chr20 67504235 67504597 -4649285 - MLT1B LTR MaLR -4 386 12 411 256 114 43 chr20 67504681 67504978 -4648904 + LTR33A LTR ERVL 103 442 -80 1704 142 9 76 chr20 67505396 67505726 -4648156 - AluJb SINE Alu -4 308 1 717 237 32 11 chr20 67505729 67505915 -4647967 + MER3 DNA MER1_type 13 202 -7 284 326 0 0 chr20 67506811 67506906 -4646976 - MIR SINE MIR -112 150 56 393 318 83 16 chr20 67507184 67507376 -4646506 - MIR SINE MIR -43 219 15 381 343 63 24 chr20 67507937 67508144 -4645738 + MIR SINE MIR 26 240 -22 664 279 91 83 chr20 67508553 67508625 -4645257 + MLT1L LTR MaLR 118 188 -427 2377 144 30 23 chr20 67508625 67509056 -4644826 + Tigger2a DNA MER2_type 1 434 0 664 279 91 83 chr20 67509056 67509467 -4644415 + MLT1L LTR MaLR 188 605 -10 570 263 68 81 chr20 67509927 67510395 -4643487 - LTR37B LTR ERV1 0 468 7 225 0 0 0 chr20 67510499 67510524 -4643358 + (CA)n Simple_repeat Simple_repeat 1 25 0 198 0 0 0 chr20 67511115 67511137 -4642745 + (TC)n Simple_repeat Simple_repeat 2 23 0 513 210 16 124 chr20 67511150 67511296 -4642586 + MER69A DNA AcHobo 10 133 -2393 2276 105 0 3 chr20 67511296 67511592 -4642290 + AluSq SINE Alu 1 295 -18 513 210 16 124 chr20 67511592 67511631 -4642251 + MER69A DNA AcHobo 133 175 -2 228 67 0 0 chr20 67512605 67512635 -4641247 + (TTCA)n Simple_repeat Simple_repeat 2 31 0 298 248 76 29 chr20 67512655 67512760 -4641122 - L2 LINE L2 -24 3289 3180 774 171 24 18 chr20 67513019 67513183 -4640699 + MER20 DNA MER1_type 53 217 -2 512 294 48 30 chr20 67514305 67514536 -4639346 + MIR SINE MIR 16 250 -12 300 255 134 0 chr20 67515013 67515170 -4638712 - MER5B DNA MER1_type 0 178 1 611 264 72 0 chr20 67515288 67515455 -4638427 - MIR SINE MIR -46 216 38 648 0 0 0 chr20 67515710 67515782 -4638100 + (GGAA)n Simple_repeat Simple_repeat 4 75 0 344 100 14 0 chr20 67515894 67515964 -4637918 - L1MA4A LINE L1 -4 6299 6229 2120 187 5 42 chr20 67515965 67516399 -4637483 - MER70A LTR ERVL -52 420 3 265 202 67 22 chr20 67517056 67517145 -4636737 - MIR SINE MIR -77 131 39 809 235 64 28 chr20 67517197 67517448 -4636434 + MIR SINE MIR 1 260 -2 216 284 15 15 chr20 67517500 67517567 -4636315 - L2 LINE L2 -68 3204 3138 246 295 98 16 chr20 67517852 67518035 -4635847 - L2 LINE L2 -593 2721 2524 207 276 0 0 chr20 67518664 67518722 -4635160 - L2 LINE L2 -23 3290 3233 391 182 27 55 chr20 67518904 67519014 -4634868 + MIR SINE MIR 64 170 -92 2556 136 26 2 chr20 67519334 67519752 -4634130 - MSTC LTR MaLR 0 428 1 844 282 136 18 chr20 67520076 67520459 -4633423 + MLT1L LTR MaLR 180 607 -8 279 305 93 7 chr20 67520642 67520793 -4633089 + MIR SINE MIR 6 169 -93 647 285 73 48 chr20 67520794 67521205 -4632677 - L1ME LINE L1 -368 5753 5326 1988 149 7 13 chr20 67521205 67521507 -4632375 - AluJb SINE Alu -11 301 2 647 285 73 48 chr20 67521507 67521551 -4632331 - L1ME LINE L1 -795 5326 5285 1386 225 39 22 chr20 67521727 67522091 -4631791 - MLT1A2 LTR MaLR -4 370 1 250 311 68 12 chr20 67522648 67522809 -4631073 - MLT1L LTR MaLR -3 612 443 312 305 126 11 chr20 67523071 67523245 -4630637 - LTR16A1 LTR ERVL -118 339 146 811 171 21 21 chr20 67523298 67523485 -4630397 + MER53 DNA DNA 1 187 -2 1304 204 48 25 chr20 67524715 67525072 -4628810 - MLT1A1 LTR MaLR 0 365 1 311 279 90 0 chr20 67525810 67525932 -4627950 + L2 LINE L2 3137 3269 -3 338 291 6 0 chr20 67526650 67526822 -4627060 + (CA)n Simple_repeat Simple_repeat 2 174 0 263 200 0 67 chr20 67526943 67527018 -4626864 - MER4-int LTR ERV1 -5442 1156 1087 300 344 90 0 chr20 67528335 67528457 -4625425 - L2 LINE L2 -2 3311 3179 389 243 9 28 chr20 67528553 67528660 -4625222 - MIR SINE MIR -63 199 95 1644 265 54 41 chr20 67528780 67529393 -4624489 - L1ME3A LINE L1 -4 6158 5554 2075 98 0 14 chr20 67529393 67529695 -4624187 - AluSg1 SINE Alu 0 309 23 1644 265 54 41 chr20 67529695 67529957 -4623925 - L1ME3A LINE L1 -608 5554 5297 2606 89 16 8 chr20 67529957 67530329 -4623553 + THE1C LTR MaLR 1 375 0 1644 265 54 41 chr20 67530329 67530608 -4623274 - L1ME3A LINE L1 -865 5297 4957 23 0 0 0 chr20 67530742 67530765 -4623117 + AT_rich Low_complexity Low_complexity 1 23 0 619 356 43 30 chr20 67530915 67531301 -4622581 - L2 LINE L2 -3 3269 2880 371 259 129 35 chr20 67532746 67532916 -4620966 - MLT1G LTR MaLR 0 590 405 900 176 4 0 chr20 67532925 67533212 -4620670 + CT-rich Low_complexity Low_complexity 1 288 0 664 198 0 11 chr20 67533225 67533402 -4620480 + CT-rich Low_complexity Low_complexity 2 176 0 674 245 124 23 chr20 67533407 67533672 -4620210 - MLT1G LTR MaLR -298 292 1 361 261 46 59 chr20 67533863 67534016 -4619866 - L2 LINE L2 0 3313 3163 211 270 0 0 chr20 67535446 67535509 -4618373 + A-rich Low_complexity Low_complexity 2 64 0 327 150 0 0 chr20 67535579 67535639 -4618243 + (TTCC)n Simple_repeat Simple_repeat 2 61 0 268 325 60 12 chr20 67535676 67535842 -4618040 + MIR SINE MIR 32 205 -57 1087 119 0 19 chr20 67536215 67536408 -4617474 - AluSg/x SINE Alu 0 312 136 278 236 83 115 chr20 67536408 67536565 -4617317 - MIR SINE MIR -82 126 14 3277 189 83 53 chr20 67537068 67537903 -4615979 - MER21B LTR ERV1 -3 860 1 321 260 0 0 chr20 67538484 67538557 -4615325 - MIR SINE MIR -105 157 85 355 328 165 25 chr20 67538994 67539357 -4614525 + MLT1K LTR MaLR 22 435 -153 2057 144 28 0 chr20 67539817 67540143 -4613739 - MSTC LTR MaLR 0 428 94 3076 119 130 18 chr20 67540144 67540698 -4613184 + LTR8A LTR ERV1 1 616 -111 3040 212 33 1 chr20 67540742 67541446 -4612436 - L1MD2 LINE L1 -4 6355 5630 423 287 60 33 chr20 67541677 67541827 -4612055 - L2 LINE L2 0 3313 3160 538 307 114 40 chr20 67541938 67542358 -4611524 - L2 LINE L2 -495 2819 2369 307 306 153 6 chr20 67542687 67542870 -4611012 - L2 LINE L2 -1880 1434 1225 21 0 0 0 chr20 67542877 67542898 -4610984 + AT_rich Low_complexity Low_complexity 1 21 0 582 274 100 11 chr20 67542921 67543111 -4610771 + MIR SINE MIR 22 228 -34 579 255 30 45 chr20 67544372 67544572 -4609310 - MLT1K LTR MaLR 0 588 392 227 266 0 16 chr20 67547124 67547188 -4606694 + LTR67 LTR ERVL 488 550 -7 598 180 86 0 chr20 67547280 67547408 -4606474 - Charlie1 DNA MER1_type 0 2761 2623 512 160 40 48 chr20 67547405 67547530 -4606352 - Charlie1 DNA MER1_type -2535 226 103 * 182 321 0 0 chr20 67547613 67547669 -4606213 - MIR SINE MIR -63 145 90 269 347 28 28 chr20 67548054 67548198 -4605684 + MIR SINE MIR 7 150 -112 190 287 43 11 chr20 67548301 67548395 -4605487 + L2 LINE L2 2924 3020 -252 5539 143 44 69 chr20 67548481 67549741 -4604141 - Tigger3b DNA MER2_type -3 1228 1 506 160 0 0 chr20 67549797 67549891 -4603991 - MER3 DNA MER1_type 0 209 116 501 325 99 0 chr20 67549930 67550121 -4603761 + LTR16C LTR ERVL 81 290 -201 592 273 137 51 chr20 67550298 67550591 -4603291 - LTR33 LTR ERVL -180 341 24 235 286 133 19 chr20 67551139 67551244 -4602638 + L2 LINE L2 2838 2954 -360 274 283 33 33 chr20 67552991 67553111 -4600771 + L2 LINE L2 2879 2998 -274 1247 79 16 11 chr20 67553269 67553903 -4599979 + (TGGA)n Simple_repeat Simple_repeat 1 637 0 690 206 35 12 chr20 67554186 67554361 -4599521 + MLT1D LTR MaLR 1 148 -357 4096 146 31 52 chr20 67554363 67555166 -4598716 + L1MB3 LINE L1 5395 6180 -3 647 259 197 7 chr20 67555243 67555552 -4598330 + MLT1D LTR MaLR 243 610 -16 217 255 181 11 chr20 67555615 67555709 -4598173 + MIR3 SINE MIR 50 159 -49 189 239 0 0 chr20 67556189 67556235 -4597647 + L2 LINE L2 2923 2968 -346 844 240 36 5 chr20 67556451 67556672 -4597210 - MIR SINE MIR -1 261 34 787 171 17 0 chr20 67556689 67556865 -4597017 + (TCCA)n Simple_repeat Simple_repeat 1 179 0 265 258 16 0 chr20 67556874 67556936 -4596946 + L2 LINE L2 3160 3222 -50 403 347 37 14 chr20 67557873 67558110 -4595772 + MIR SINE MIR 13 262 0 234 0 0 0 chr20 67558464 67558490 -4595392 + (TC)n Simple_repeat Simple_repeat 1 26 0 208 255 0 0 chr20 67558763 67558810 -4595072 - L2 LINE L2 0 3313 3267 2298 240 37 21 chr20 67558903 67559489 -4594393 - MER77 LTR ERV1 -7 598 53 371 282 16 24 chr20 67559795 67559919 -4593963 + MIR SINE MIR 68 190 -72 277 330 10 0 chr20 67560141 67560241 -4593641 - L2 LINE L2 -44 3228 3128 376 363 82 7 chr20 67560454 67560757 -4593125 - L2 LINE L2 -407 2907 2582 412 297 16 33 chr20 67560826 67561008 -4592874 - MER63A DNA MER1_type -5 205 27 657 236 177 3 chr20 67561023 67561311 -4592571 + LTR16A1 LTR ERVL 81 418 -39 277 252 8 87 chr20 67561353 67561480 -4592402 + MER5A DNA MER1_type 70 186 -3 195 300 0 0 chr20 67562321 67562371 -4591511 + MIR SINE MIR 83 132 -76 1377 223 35 21 chr20 67562404 67562781 -4591101 + MER113 DNA MER1_type? 7 388 -133 210 325 12 12 chr20 67563004 67563084 -4590798 + MER5A DNA MER1_type 66 145 -44 233 352 38 0 chr20 67563911 67564016 -4589866 + MIR SINE MIR 110 218 -44 1202 223 153 19 chr20 67564037 67564449 -4589433 + MLT1C LTR MaLR 1 467 0 458 288 85 18 chr20 67564456 67564688 -4589194 - MIR SINE MIR -13 249 4 349 257 29 19 chr20 67564688 67564790 -4589092 + L2 LINE L2 3163 3265 -7 2040 118 7 23 chr20 67564791 67565185 -4588697 + AluSx SINE Alu 1 389 0 350 263 114 18 chr20 67565259 67565373 -4588509 - L2 LINE L2 -12 3260 3136 2176 84 62 0 chr20 67566324 67566597 -4587285 + AluSq SINE Alu 1 290 -23 270 0 0 0 chr20 67566607 67566637 -4587245 + (TG)n Simple_repeat Simple_repeat 1 30 0 319 221 76 2 chr20 67566637 67566716 -4587166 + L1MC3 LINE L1 1996 6926 -1139 * 424 289 0 0 chr20 67566658 67566748 -4587134 - L1MC4 LINE L1 -1339 6703 6614 186 43 0 0 chr20 67566748 67566771 -4587111 + (CA)n Simple_repeat Simple_repeat 2 24 0 315 95 0 0 chr20 67566795 67566837 -4587045 - AluS SINE Alu -212 91 50 1071 203 97 61 chr20 67567645 67567868 -4586014 + L1MB3 LINE L1 5835 6075 -108 2031 137 0 3 chr20 67567868 67568167 -4585715 + AluSq SINE Alu 1 298 -15 1071 203 97 61 chr20 67568167 67568273 -4585609 + L1MB3 LINE L1 6075 6176 -7 213 271 0 0 chr20 67569055 67569103 -4584779 + GA-rich Low_complexity Low_complexity 1 48 0 503 281 41 67 chr20 67569154 67569495 -4584387 - MLT1K LTR MaLR -27 561 230 593 296 63 55 chr20 67570235 67570633 -4583249 + MLT1K LTR MaLR 173 573 -15 386 242 109 0 chr20 67570804 67570932 -4582950 + MIR SINE MIR 25 166 -96 721 302 22 9 chr20 67571635 67571860 -4582022 + MIR SINE MIR 13 240 -22 462 201 54 7 chr20 67572595 67572802 -4581080 - MLT1K LTR MaLR -346 249 1 190 235 0 20 chr20 67572813 67572864 -4581018 + MIR SINE MIR 210 259 -3 438 307 207 24 chr20 67573214 67573625 -4580257 - L2 LINE L2 -1 3312 2827 320 263 148 54 chr20 67573655 67573986 -4579896 - L2 LINE L2 -557 2757 2396 372 235 34 25 chr20 67574521 67574640 -4579242 + MIR SINE MIR 17 136 -72 571 243 85 60 chr20 67574837 67575072 -4578810 + LTR16C LTR ERVL 251 491 0 288 226 16 0 chr20 67575166 67575228 -4578654 + L2 LINE L2 3210 3272 0 858 20 0 0 chr20 67576099 67576199 -4577683 + (GGAA)n Simple_repeat Simple_repeat 1 100 0 1021 100 12 0 chr20 67576200 67576370 -4577512 + (TGGA)n Simple_repeat Simple_repeat 3 174 0 1635 251 65 0 chr20 67576448 67576815 -4577067 - MLT1E LTR MaLR -3 590 200 387 301 45 6 chr20 67576854 67577010 -4576872 - LTR16A LTR ERVL -288 162 1 181 411 0 0 chr20 67577354 67577427 -4576455 + MIR SINE MIR 177 249 -13 816 221 23 28 chr20 67577478 67577695 -4576187 - MER20 DNA MER1_type 0 219 4 471 328 70 16 chr20 67578810 67579284 -4574598 + L2 LINE L2 2602 3099 -214 632 176 4 34 chr20 67579290 67579554 -4574328 + (CACCAT)n Simple_repeat Simple_repeat 1 255 0 301 355 36 36 chr20 67580584 67580804 -4573078 - MIR SINE MIR -15 247 28 844 256 54 35 chr20 67580947 67581263 -4572619 - MER113 DNA MER1_type? -147 374 53 823 156 27 43 chr20 67581371 67581557 -4572325 - MER20 DNA MER1_type 0 219 37 183 295 128 77 chr20 67582189 67582345 -4571537 + MER5B DNA MER1_type 7 170 -8 2506 63 35 0 chr20 67582354 67582701 -4571181 - L1PA8 LINE L1 0 6172 5814 2313 85 23 3 chr20 67582709 67583016 -4570866 - AluSq SINE Alu 0 313 1 225 65 0 0 chr20 67583148 67583179 -4570703 + (T)n Simple_repeat Simple_repeat 1 31 0 357 136 0 0 chr20 67584159 67584218 -4569664 + Alu SINE Alu 244 302 0 503 259 93 12 chr20 67584451 67584613 -4569269 + MER96 DNA MER1_type 1 175 0 204 158 26 0 chr20 67585395 67585433 -4568449 + (TTCA)n Simple_repeat Simple_repeat 1 39 0 937 210 84 57 chr20 67585702 67586107 -4567775 - MER96B DNA MER1_type 0 417 2 414 248 59 0 chr20 67586703 67586804 -4567078 - MER53 DNA DNA -78 111 5 287 244 156 30 chr20 67586927 67587062 -4566820 - L2 LINE L2 -1266 2048 1897 322 174 72 0 chr20 67587532 67587601 -4566281 + ORSL DNA AcHobo 173 246 -29 300 281 31 31 chr20 67588304 67588400 -4565482 + L1MC4 LINE L1 6608 6703 -1339 2104 126 3 17 chr20 67588499 67588801 -4565081 + AluSx SINE Alu 1 298 -14 187 253 218 0 chr20 67588939 67589026 -4564856 - MIR SINE MIR -71 137 32 995 158 13 0 chr20 67589381 67589539 -4564343 + FAM SINE Alu 14 173 -12 1502 51 5 0 chr20 67590084 67590281 -4563601 - L1PA6 LINE L1 0 6154 5957 619 299 96 18 chr20 67590368 67590456 -4563426 + L1ME4a LINE L1 5484 5564 -557 306 0 0 0 chr20 67590456 67590490 -4563392 + (TG)n Simple_repeat Simple_repeat 2 35 0 619 299 96 18 chr20 67590490 67590736 -4563146 + L1ME4a LINE L1 5564 5844 -277 197 320 29 29 chr20 67591239 67591342 -4562540 + MIR3 SINE MIR 4 106 -102 241 236 69 28 chr20 67591835 67591907 -4561975 - MIR SINE MIR -97 165 91 186 167 0 0 chr20 67592294 67592330 -4561552 + (TG)n Simple_repeat Simple_repeat 2 37 0 535 310 11 11 chr20 67592763 67592950 -4560932 + MIR SINE MIR 22 213 -49 206 246 0 35 chr20 67592969 67593026 -4560856 + CT-rich Low_complexity Low_complexity 1 55 0 258 136 0 0 chr20 67593030 67593074 -4560808 + (CAT)n Simple_repeat Simple_repeat 3 46 0 454 245 224 0 chr20 67593455 67593602 -4560280 + MER5A DNA MER1_type 10 189 0 344 342 92 9 chr20 67593686 67593914 -4559968 + MIR SINE MIR 4 250 -12 361 303 58 27 chr20 67594175 67594363 -4559519 + MLT1J LTR MaLR 224 417 -94 485 294 81 41 chr20 67594603 67594824 -4559058 - L1ME4a LINE L1 -69 6052 5823 480 282 66 22 chr20 67595464 67595645 -4558237 - Charlie8 DNA MER1_type -2203 214 26 516 230 9 9 chr20 67596276 67596389 -4557493 - MER81 DNA DNA 0 114 2 587 178 0 0 chr20 67596611 67596712 -4557170 + MER5A DNA MER1_type 9 109 -80 652 258 50 110 chr20 67597080 67597444 -4556438 - MLT1L LTR MaLR 0 615 170 261 379 71 0 chr20 67597653 67597793 -4556089 + L2 LINE L2 3123 3272 0 223 182 0 18 chr20 67598640 67598695 -4555187 + MIR SINE MIR 90 143 -65 1088 130 0 21 chr20 67598856 67599048 -4554834 + MER53 DNA DNA 2 189 0 197 280 0 0 chr20 67599323 67599373 -4554509 - MIR SINE MIR -63 145 96 353 311 16 8 chr20 67599537 67599659 -4554223 + MIR SINE MIR 93 215 -47 262 250 26 0 chr20 67599787 67599863 -4554019 + MIR SINE MIR 88 165 -97 302 368 45 0 chr20 67600737 67600892 -4552990 - MIR SINE MIR -92 170 9 501 260 34 20 chr20 67602098 67602244 -4551638 - MIR3 SINE MIR -59 149 2 683 201 7 0 chr20 67602244 67602513 -4551369 + (GGTTG)n Simple_repeat Simple_repeat 1 270 0 258 286 117 20 chr20 67602968 67603100 -4550782 - MIR SINE MIR -61 147 45 258 258 0 16 chr20 67603426 67603488 -4550394 - L2 LINE L2 0 3313 3253 280 366 20 20 chr20 67603556 67603709 -4550173 + MIR SINE MIR 67 219 -43 2409 46 4 7 chr20 67604571 67604898 -4548984 - AluY SINE Alu 0 326 1 308 206 335 18 chr20 67604932 67605102 -4548780 + MIR SINE MIR 13 236 -26 1790 200 9 0 chr20 67605119 67605464 -4548418 + MER7A DNA MER2_type 1 346 0 238 204 0 0 chr20 67605589 67605638 -4548244 + MIR SINE MIR 140 188 -74 381 156 0 0 chr20 67605991 67606068 -4547814 + (CA)n Simple_repeat Simple_repeat 2 78 0 565 204 147 21 chr20 67606783 67606974 -4546908 + MER113 DNA MER1_type? 3 217 -304 1860 91 3 17 chr20 67606993 67607280 -4546602 + L1PA7 LINE L1 5869 6151 -3 246 305 53 46 chr20 67607352 67607503 -4546379 - MIR3 SINE MIR -56 152 1 647 259 69 93 chr20 67608168 67608600 -4545282 + MLT1K LTR MaLR 141 562 -26 246 232 0 0 chr20 67608742 67608798 -4545084 + L2 LINE L2 3006 3061 -211 406 251 86 53 chr20 67608858 67609045 -4544837 + MIR SINE MIR 8 200 -62 209 261 72 0 chr20 67609181 67609250 -4544632 + L2 LINE L2 3196 3269 -3 311 239 155 58 chr20 67609461 67609616 -4544266 - MER5B DNA MER1_type -4 174 5 1569 203 20 29 chr20 67610087 67610393 -4543489 - AluJo SINE Alu -9 303 1 1861 182 29 13 chr20 67611976 67612360 -4541522 + MLT1B LTR MaLR 1 390 0 314 347 42 7 chr20 67613068 67613212 -4540670 - MLT1K LTR MaLR -419 169 21 1125 219 46 49 chr20 67613255 67613624 -4540258 - MER87 LTR ERV1 0 541 174 530 255 108 0 chr20 67614002 67614159 -4539723 + MIR SINE MIR 44 216 -46 404 335 16 43 chr20 67614171 67614347 -4539535 + L2 LINE L2 2528 2696 -618 918 171 45 0 chr20 67614347 67614523 -4539359 - MER53 DNA DNA -4 185 2 404 335 16 43 chr20 67614523 67614600 -4539282 + L2 LINE L2 2696 2774 -540 487 285 34 28 chr20 67614948 67615127 -4538755 + MIR SINE MIR 60 239 -23 233 341 114 35 chr20 67615828 67616256 -4537626 - L2 LINE L2 -4 3309 2848 1172 231 102 37 chr20 67616320 67616753 -4537129 + MLT1C LTR MaLR 6 466 -1 462 330 19 19 chr20 67616946 67617161 -4536721 - MIR SINE MIR -34 228 14 2251 109 10 0 chr20 67618374 67618677 -4535205 - AluSx SINE Alu -1 311 6 199 205 0 0 chr20 67618712 67618751 -4535131 + L2 LINE L2 3267 3305 -8 203 78 78 0 chr20 67619080 67619131 -4534751 + GA-rich Low_complexity Low_complexity 5 59 0 360 297 73 57 chr20 67619793 67619985 -4533897 + MER63A DNA MER1_type 1 195 -15 201 359 16 0 chr20 67620387 67620451 -4533431 - L2 LINE L2 -2 3270 3206 255 284 102 35 chr20 67620482 67620679 -4533203 - L1ME4a LINE L1 -2 6119 5910 410 336 62 57 chr20 67620681 67620925 -4532957 - L1MC4a LINE L1 -1932 5876 5632 1267 272 16 31 chr20 67621029 67621474 -4532408 - L1ME3A LINE L1 0 6170 5733 23 0 0 0 chr20 67621514 67621537 -4532345 + AT_rich Low_complexity Low_complexity 1 23 0 189 107 0 0 chr20 67621885 67621913 -4531969 + (TGAA)n Simple_repeat Simple_repeat 2 29 0 270 310 182 5 chr20 67622555 67622742 -4531140 + L2 LINE L2 2720 2939 -375 300 185 15 46 chr20 67622877 67622942 -4530940 + L2 LINE L2 3234 3296 -17 205 256 186 0 chr20 67624277 67624363 -4529519 + MIR SINE MIR 37 138 -70 678 280 58 48 chr20 67625529 67625922 -4527960 - MLT2C1 LTR ERVL 0 397 1 1577 197 83 16 chr20 67626389 67626835 -4527047 - MER69 DNA AcHobo -106 2420 1945 1831 193 14 30 chr20 67626869 67627307 -4526575 + MLT2B1 LTR ERVL 6 515 0 4338 176 126 31 chr20 67627690 67629139 -4524743 - MER52A LTR ERV1 0 1755 1 193 256 61 37 chr20 67629602 67629684 -4524198 - MIR3 SINE MIR -37 171 88 1940 134 0 3 chr20 67630303 67630611 -4523271 + AluSx SINE Alu 1 307 0 193 328 0 0 chr20 67630697 67630755 -4523127 - MIR SINE MIR -106 156 99 252 305 37 12 chr20 67630827 67630909 -4522973 - MIR SINE MIR -96 112 29 427 306 72 16 chr20 67630955 67631148 -4522734 - Charlie8 DNA MER1_type -2137 280 77 642 211 0 0 chr20 67631372 67631552 -4522330 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 201 196 0 0 chr20 67631586 67631632 -4522250 + (TCCA)n Simple_repeat Simple_repeat 4 49 0 321 247 146 38 chr20 67631917 67632075 -4521807 - L2 LINE L2 -3 3310 3136 263 344 38 38 chr20 67632476 67632659 -4521223 - MIR3 SINE MIR -6 202 20 486 302 173 30 chr20 67632669 67633319 -4520563 + L2 LINE L2 2506 3295 -18 526 273 128 21 chr20 67634064 67634285 -4519597 - MIR SINE MIR -16 246 13 719 304 138 43 chr20 67634701 67635346 -4518536 + L1M3 LINE L1 4531 5237 -909 299 295 84 26 chr20 67635366 67635556 -4518326 + L1M3 LINE L1 5263 5463 -705 220 26 26 26 chr20 67635591 67635629 -4518253 + (TTTTTG)n Simple_repeat Simple_repeat 6 43 0 2097 123 0 0 chr20 67635631 67635931 -4517951 - AluSx SINE Alu -12 300 1 213 263 53 88 chr20 67636700 67636814 -4517068 + MIR3 SINE MIR 97 206 -2 478 300 49 21 chr20 67636835 67637078 -4516804 + L1ME1 LINE L1 5614 5863 -258 718 216 26 0 chr20 67637098 67637251 -4516631 + MER97b DNA MER1_type? 21 177 -876 974 63 0 0 chr20 67638249 67638448 -4515434 + AluY SINE Alu 185 383 0 264 253 52 105 chr20 67638543 67638951 -4514931 + L1MEc LINE L1 969 1354 -5042 257 271 104 0 chr20 67638964 67639060 -4514822 + L1ME1 LINE L1 6053 6158 -8 597 304 96 56 chr20 67639078 67639528 -4514354 + HAL1b LINE L1 247 714 -634 2723 224 41 69 chr20 67639852 67640168 -4513714 + L1MC5 LINE L1 6638 6961 -1000 2159 84 14 0 chr20 67640168 67640455 -4513427 + AluSc SINE Alu 1 291 -18 2723 224 41 69 chr20 67640455 67641050 -4512832 + L1MC5 LINE L1 6961 7523 -438 297 289 57 38 chr20 67641141 67641352 -4512530 + L1ME3A LINE L1 5956 6170 0 249 278 121 29 chr20 67641342 67641427 -4512455 + L1ME4a LINE L1 5887 5963 -158 * 1861 142 7 3 chr20 67641427 67641723 -4512159 + AluJb SINE Alu 1 297 -15 249 278 121 29 chr20 67641723 67641810 -4512072 + L1ME4a LINE L1 5963 6075 -46 315 311 22 0 chr20 67641913 67642003 -4511879 + L2 LINE L2 3217 3308 -5 184 313 15 0 chr20 67642764 67642831 -4511051 + L2 LINE L2 3184 3251 -21 579 263 56 15 chr20 67642838 67643234 -4510648 + L2 LINE L2 2733 3148 -165 217 335 45 52 chr20 67644579 67644848 -4509034 + L2 LINE L2 2639 2905 -409 253 336 44 26 chr20 67644986 67645099 -4508783 + L2 LINE L2 3148 3262 -10 358 247 77 77 chr20 67645558 67645728 -4508154 + MER5A DNA MER1_type 19 188 -1 183 287 0 81 chr20 67645830 67645917 -4507965 + L2 LINE L2 1652 1731 -1583 367 247 165 19 chr20 67646144 67646248 -4507634 + MIR SINE MIR 79 167 -95 2104 92 101 21 chr20 67646248 67646585 -4507297 + THE1B LTR MaLR 1 364 0 367 247 165 19 chr20 67646585 67646638 -4507244 + MIR SINE MIR 167 259 -3 268 320 47 27 chr20 67649160 67649310 -4504572 - MIR SINE MIR -88 174 22 311 303 15 30 chr20 67649670 67649802 -4504080 - LTR33 LTR ERVL -379 142 13 480 301 49 35 chr20 67649899 67650125 -4503757 - L2 LINE L2 -3 3310 3082 815 273 30 17 chr20 67650561 67650792 -4503090 - MIR SINE MIR -6 256 23 293 342 40 20 chr20 67650794 67650946 -4502936 - MIR SINE MIR -73 189 35 2260 73 0 16 chr20 67651711 67652014 -4501868 - AluY SINE Alu -13 298 1 517 33 0 0 chr20 67652026 67652087 -4501795 - AluY SINE Alu -179 132 72 318 284 23 23 chr20 67652255 67652343 -4501539 - L2 LINE L2 -16 3256 3169 657 239 14 19 chr20 67653127 67653229 -4500653 + MER113 DNA MER1_type? 4 105 -416 2619 138 37 4 chr20 67653229 67653685 -4500197 - L1MC2 LINE L1 -1 6343 5873 657 239 14 19 chr20 67653685 67653791 -4500091 + MER113 DNA MER1_type? 105 211 -310 1536 221 8 50 chr20 67653803 67654183 -4499699 + L1MB7 LINE L1 -392 4294967267 -6142 591 172 112 0 chr20 67654194 67654328 -4499554 + L1MC2 LINE L1 5964 6112 -232 2337 223 8 14 chr20 67654372 67654856 -4499026 + L1MB7 LINE L1 23 503 -5610 * 2682 219 37 37 chr20 67654825 67655575 -4498307 + L1MB7 LINE L1 3915 4664 -1551 4095 185 66 15 chr20 67655575 67656642 -4497240 + L1MB7 LINE L1 5136 6252 -1 21 71 0 0 chr20 67656685 67656727 -4497155 + AT_rich Low_complexity Low_complexity 1 42 0 843 264 162 25 chr20 67656972 67657366 -4496516 - MLT1J LTR MaLR -42 469 22 574 234 63 40 chr20 67657644 67657819 -4496063 - MIR SINE MIR -56 206 28 201 74 0 0 chr20 67658565 67658592 -4495290 + (GGGA)n Simple_repeat Simple_repeat 4 30 0 181 271 17 17 chr20 67658760 67658819 -4495063 - L2 LINE L2 -29 3284 3226 752 224 157 9 chr20 67658839 67659049 -4494833 - MIR SINE MIR -1 261 21 192 221 104 52 chr20 67659953 67660030 -4493852 - MIR SINE MIR -12 250 170 306 339 129 0 chr20 67660093 67660264 -4493618 - MIR SINE MIR -54 208 16 490 252 53 0 chr20 67660522 67660653 -4493229 - MIR SINE MIR -77 185 48 1840 132 63 0 chr20 67661079 67661366 -4492516 - AluSq SINE Alu -2 311 7 365 314 63 0 chr20 67661550 67661709 -4492173 + MIR SINE MIR 33 201 -61 921 230 5 20 chr20 67661801 67661997 -4491885 + MER58A DNA MER1_type 29 221 -3 485 230 12 43 chr20 67661997 67662158 -4491724 - MER104 DNA Tc2 -22 158 3 522 214 17 26 chr20 67662293 67662410 -4491472 + MIR SINE MIR 52 167 -95 2213 160 22 0 chr20 67662632 67662988 -4490894 - THE1B LTR MaLR 0 364 1 500 331 78 24 chr20 67663522 67663894 -4489988 + L1MEc LINE L1 56 447 -5949 7826 235 51 51 chr20 67664193 67665625 -4488257 + L1M4 LINE L1 1064 2494 -3721 1703 174 0 0 chr20 67665625 67665912 -4487970 + AluJo SINE Alu 1 287 -25 7826 235 51 51 chr20 67665912 67668158 -4485724 + L1M4 LINE L1 2494 4650 -1565 1456 124 121 30 chr20 67668158 67668455 -4485427 - AluSg SINE Alu 0 310 6 7826 235 51 51 chr20 67668455 67668747 -4485135 + L1M4 LINE L1 4650 4940 -1275 429 218 69 0 chr20 67668747 67668848 -4485034 - MER96 DNA MER1_type? -67 108 1 501 164 43 17 chr20 67669482 67669598 -4484284 + LTR16C LTR ERVL 373 491 0 376 206 284 7 chr20 67670001 67670142 -4483740 + MER5A DNA MER1_type 10 189 0 713 279 81 0 chr20 67670190 67670387 -4483495 + MIR SINE MIR 48 260 -2 398 279 130 0 chr20 67670593 67670747 -4483135 - MER5B DNA MER1_type -2 176 3 1989 133 7 0 chr20 67671118 67671412 -4482470 + AluSq SINE Alu 1 296 -17 866 135 45 39 chr20 67671863 67672041 -4481841 + MER53 DNA DNA 11 189 0 785 304 96 47 chr20 67672168 67672574 -4481308 + MLT1J LTR MaLR 5 438 -73 1694 171 31 3 chr20 67672574 67672867 -4481015 - AluSx SINE Alu -11 301 1 785 304 96 47 chr20 67672867 67672927 -4480955 + MLT1J LTR MaLR 438 494 -17 202 243 86 0 chr20 67675289 67675359 -4478523 + L2 LINE L2 3150 3225 -47 510 31 0 0 chr20 67675374 67675438 -4478444 + (TGAA)n Simple_repeat Simple_repeat 1 64 0 267 242 268 13 chr20 67675692 67675845 -4478037 + L2 LINE L2 2554 2745 -569 674 309 94 35 chr20 67675907 67676081 -4477801 + L2 LINE L2 2887 3049 -264 234 0 0 0 chr20 67676081 67676107 -4477775 + (CCA)n Simple_repeat Simple_repeat 1 26 0 674 309 94 35 chr20 67676107 67676334 -4477548 + L2 LINE L2 3049 3312 -1 1346 223 121 17 chr20 67676909 67677321 -4476561 + MLT1C LTR MaLR 13 467 0 562 266 116 0 chr20 67678385 67678558 -4475324 - MIR SINE MIR -3 259 67 208 293 81 10 chr20 67679196 67679295 -4474587 + MIR SINE MIR 27 132 -130 262 250 30 60 chr20 67679720 67679820 -4474062 + L2 LINE L2 3154 3250 -22 828 39 0 0 chr20 67679909 67680013 -4473869 + AluY SINE Alu 205 308 -3 538 299 60 37 chr20 67680508 67680776 -4473106 + MLT1K LTR MaLR 1 274 -314 534 266 102 33 chr20 67680983 67681227 -4472655 + MLT1K LTR MaLR 313 573 -15 636 251 42 67 chr20 67681386 67681669 -4472213 + L2 LINE L2 3038 3313 0 772 256 150 52 chr20 67681721 67682127 -4471755 - MLT1J LTR MaLR -60 451 6 275 324 89 13 chr20 67682158 67682383 -4471499 + L1ME4a LINE L1 5773 6014 -107 2089 98 11 0 chr20 67682469 67682756 -4471126 - AluSx SINE Alu -22 290 1 335 244 30 38 chr20 67682840 67682971 -4470911 + GA-rich Low_complexity Low_complexity 2 131 0 259 296 23 38 chr20 67683148 67683280 -4470602 + CT-rich Low_complexity Low_complexity 2 131 0 2078 98 11 0 chr20 67683364 67683651 -4470231 + AluSx SINE Alu 1 290 -22 275 324 89 13 chr20 67683737 67683962 -4469920 - L1ME4a LINE L1 -107 6014 5773 686 251 159 57 chr20 67683993 67684364 -4469518 + MLT1J LTR MaLR 6 414 -97 9475 161 81 84 chr20 67685046 67685206 -4468676 + Charlie5 DNA MER1_type 2 161 -2463 1830 181 48 73 chr20 67685206 67685267 -4468615 - MLT1D LTR MaLR 0 505 444 1499 173 44 4 chr20 67685267 67685562 -4468320 + AluJb SINE Alu 1 306 0 1830 181 48 73 chr20 67685562 67686017 -4467865 - MLT1D LTR MaLR -61 444 1 9475 161 81 84 chr20 67686017 67686690 -4467192 + Charlie5 DNA MER1_type 161 835 -1789 1307 86 0 0 chr20 67686690 67686864 -4467018 - AluY SINE Alu -5 306 133 2397 48 7 10 chr20 67686864 67687173 -4466709 - AluY SINE Alu -2 309 2 9475 161 81 84 chr20 67687173 67688789 -4465093 + Charlie5 DNA MER1_type 833 2617 -7 331 319 51 25 chr20 67689202 67689359 -4464523 - L1M4 LINE L1 -2787 3359 3199 600 250 15 0 chr20 67689360 67689492 -4464390 - FLAM_A SINE Alu -8 134 1 602 279 120 45 chr20 67689492 67689825 -4464057 - L1M4 LINE L1 -2931 3215 2858 1004 255 122 23 chr20 67689858 67690203 -4463679 + L1ME3 LINE L1 5778 6156 -6 304 264 88 22 chr20 67690862 67691044 -4462838 - L1M4 LINE L1 -3435 2711 2518 1758 170 36 9 chr20 67691746 67692082 -4461800 - L1PB4 LINE L1 0 6156 5812 552 219 73 29 chr20 67692095 67692232 -4461650 + L2 LINE L2 3171 3313 0 342 377 27 0 chr20 67692300 67692446 -4461436 - MIR SINE MIR -64 198 49 324 318 81 67 chr20 67692578 67692861 -4461021 + L2 LINE L2 2982 3268 -4 182 128 26 51 chr20 67692908 67692947 -4460935 + L2 LINE L2 3029 3066 -206 202 301 27 14 chr20 67693407 67693480 -4460402 - L2 LINE L2 -61 3211 3138 477 273 103 18 chr20 67693658 67693823 -4460059 + MIR SINE MIR 13 191 -71 524 279 135 50 chr20 67694143 67694505 -4459377 + MLT1L LTR MaLR 142 534 -81 1912 144 3 6 chr20 67694932 67695245 -4458637 + AluSx SINE Alu 1 312 0 730 100 0 17 chr20 67695246 67695366 -4458516 + (GGAA)n Simple_repeat Simple_repeat 2 119 0 1707 174 0 10 chr20 67695494 67695805 -4458077 - AluJb SINE Alu -2 310 3 1003 209 47 15 chr20 67696549 67696850 -4457032 - MLT1A1 LTR MaLR 0 365 2 319 326 211 21 chr20 67696861 67697198 -4456684 + L2 LINE L2 2856 3256 -16 610 139 70 76 chr20 67697251 67697423 -4456459 + MER53 DNA DNA 19 189 0 715 197 102 102 chr20 67697910 67698215 -4455667 + MLT1B LTR MaLR 45 349 -41 565 168 5 200 chr20 67699005 67699157 -4454725 - MER5A DNA MER1_type -4 185 87 5424 87 26 1 chr20 67699157 67699895 -4453987 - L1PA10 LINE L1 -4 6164 5409 565 168 5 200 chr20 67699895 67699962 -4453920 - MER5A DNA MER1_type -102 87 9 210 317 58 33 chr20 67700072 67700192 -4453690 - L2 LINE L2 -6 3266 3144 * 230 299 56 19 chr20 67700189 67700296 -4453586 + L2 LINE L2 2634 2744 -570 551 318 29 18 chr20 67700615 67700852 -4453030 + MIR SINE MIR 15 259 -3 236 235 255 10 chr20 67701417 67701519 -4452363 + L2 LINE L2 3185 3311 -2 281 264 68 68 chr20 67701552 67702112 -4451770 + L1M4 LINE L1 2673 3232 -2914 272 86 0 0 chr20 67702170 67702205 -4451677 - U2 snRNA snRNA -153 35 1 262 287 32 45 chr20 67702300 67702457 -4451425 + L1M4 LINE L1 4457 4611 -1535 681 126 45 0 chr20 67703803 67703914 -4449968 + LTR45B LTR ERV1 3 118 -371 291 213 16 0 chr20 67704599 67704660 -4449222 - MIR SINE MIR -92 170 109 491 237 104 0 chr20 67705226 67705361 -4448521 + MER63 DNA MER1_type 1 775 -61 426 228 136 54 chr20 67705432 67705616 -4448266 + LTR16C LTR ERVL 289 487 -4 478 333 64 55 chr20 67706187 67706514 -4447368 + L2 LINE L2 2921 3250 -22 393 39 0 0 chr20 67706528 67706579 -4447303 + (TTCA)n Simple_repeat Simple_repeat 3 53 0 317 265 166 60 chr20 67706799 67706885 -4446997 - MER5A DNA MER1_type -9 180 105 2181 92 0 0 chr20 67706885 67707199 -4446683 - AluSg SINE Alu 0 314 1 317 265 166 60 chr20 67707199 67707262 -4446620 - MER5A DNA MER1_type -84 105 14 364 194 82 20 chr20 67707589 67707687 -4446195 + MER113 DNA MER1_type? 307 410 -111 2212 104 3 0 chr20 67707687 67707995 -4445887 + AluSx SINE Alu 1 309 -3 1126 253 162 2 chr20 67709144 67709552 -4444330 + MLT2B2 LTR ERVL 2 474 -41 553 301 70 10 chr20 67709849 67710048 -4443834 + MIR SINE MIR 7 217 -45 718 229 148 33 chr20 67710209 67710541 -4443341 + L1ME4a LINE L1 5685 6054 -67 2519 50 0 0 chr20 67710608 67710909 -4442973 + AluY SINE Alu 2 302 -9 380 169 78 0 chr20 67711485 67711562 -4442320 + MLT1I LTR MaLR 327 409 0 1762 203 31 21 chr20 67712013 67712397 -4441485 - MLT1B LTR MaLR 0 390 3 984 242 131 26 chr20 67712716 67713022 -4440860 + MLT1I LTR MaLR 72 409 0 1634 189 105 12 chr20 67713675 67714009 -4439873 + MLT1A1 LTR MaLR 1 365 0 5313 235 150 20 chr20 67714029 67715539 -4438343 + MLT1A1-int LTR MaLR 23 1729 -6 1415 219 49 6 chr20 67715551 67715898 -4437984 + MLT1A1 LTR MaLR 4 365 0 368 264 90 38 chr20 67716063 67716275 -4437607 + LTR16A1 LTR ERVL 161 383 -74 252 288 27 0 chr20 67716327 67716400 -4437482 + L2 LINE L2 3197 3271 -1 2199 101 0 0 chr20 67716416 67716714 -4437168 - AluSx SINE Alu -14 298 1 180 0 0 0 chr20 67716942 67716962 -4436920 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 545 234 29 101 chr20 67717478 67717687 -4436195 - MER102b DNA MER1_type -8 333 140 571 241 0 0 chr20 67717948 67718056 -4435826 - MER81 DNA DNA -5 109 2 297 167 17 0 chr20 67718352 67718412 -4435470 + MLT1J2 LTR MaLR 384 444 -6 1532 177 56 22 chr20 67718600 67719023 -4434859 + MLT1B LTR MaLR 7 467 0 227 220 68 34 chr20 67719291 67719350 -4434532 + LSAU Satellite Satellite 360 420 -78 390 266 181 25 chr20 67720249 67720448 -4433434 + MIR SINE MIR 33 262 0 907 304 43 6 chr20 67720555 67720664 -4433218 + MER58B DNA MER1_type 2 106 -2314 1964 132 7 0 chr20 67720664 67720968 -4432914 + AluSx SINE Alu 4 309 -3 907 304 43 6 chr20 67720968 67721184 -4432698 + MER58B DNA MER1_type 106 339 -2 316 326 24 42 chr20 67721348 67721547 -4432335 + MIR SINE MIR 4 203 -59 4684 231 46 65 chr20 67721695 67723670 -4430212 + L1MC3 LINE L1 4 2016 -4925 1180 193 34 120 chr20 67723670 67724079 -4429803 - MLT1A2 LTR MaLR 0 374 1 4684 231 46 65 chr20 67724079 67725883 -4427999 + L1MC3 LINE L1 2016 4314 -2627 715 163 8 0 chr20 67725883 67726006 -4427876 + FLAM_C SINE Alu 17 140 -3 4684 231 46 65 chr20 67726006 67726480 -4427402 + L1MC3 LINE L1 4314 4796 -2145 1653 180 0 13 chr20 67726486 67726791 -4427091 + AluJo SINE Alu 1 301 -11 240 122 0 0 chr20 67726801 67726842 -4427040 + (GGA)n Simple_repeat Simple_repeat 2 42 0 1375 257 15 17 chr20 67726852 67727100 -4426782 + L1MC3 LINE L1 4795 5043 -1898 2264 111 0 3 chr20 67727100 67727397 -4426485 + AluSc SINE Alu 1 296 -13 1375 257 15 17 chr20 67727397 67727552 -4426330 + L1MC3 LINE L1 5043 5197 -1744 1588 129 139 19 chr20 67727558 67727875 -4426007 + L1MA7 LINE L1 5937 6291 0 * 6567 196 59 22 chr20 67727873 67728655 -4425227 + L1MC3 LINE L1 5140 4750 -2191 2091 97 32 0 chr20 67728655 67728933 -4424949 + AluSg SINE Alu 16 302 -8 6567 196 59 22 chr20 67728933 67730439 -4423443 + L1MC3 LINE L1 4749 6198 -743 528 270 42 95 chr20 67730453 67730738 -4423144 - L2 LINE L2 -122 3191 2922 546 275 50 6 chr20 67730849 67731031 -4422851 - LTR16A1 LTR ERVL -94 363 174 1035 257 75 61 chr20 67731583 67732435 -4421447 + L1MDa LINE L1 1013 1876 -4664 393 341 16 0 chr20 67732719 67732845 -4421037 - MIR SINE MIR -97 165 38 2130 94 84 0 chr20 67733016 67733303 -4420579 - AluSx SINE Alu -1 311 1 243 0 0 0 chr20 67733336 67733363 -4420519 + (CA)n Simple_repeat Simple_repeat 2 28 0 274 216 20 0 chr20 67733986 67734037 -4419845 - L2 LINE L2 0 3272 3221 327 261 98 0 chr20 67734045 67734137 -4419745 + L2 LINE L2 3213 3313 0 225 234 0 0 chr20 67734153 67734217 -4419665 + (TGGA)n Simple_repeat Simple_repeat 3 66 0 350 310 26 17 chr20 67735994 67736110 -4417772 + MIR SINE MIR 36 152 -56 1637 181 50 0 chr20 67738382 67738663 -4415219 + AluJo SINE Alu 1 295 -17 631 210 170 22 chr20 67738914 67739138 -4414744 - MER113 DNA MER1_type? -259 262 6 322 322 114 44 chr20 67739346 67739644 -4414238 - L1 LINE L1 -856 5290 4972 306 318 85 40 chr20 67739756 67739932 -4413950 - L1 LINE L1 -1326 4820 4637 37 23 0 0 chr20 67739951 67739995 -4413887 + AT_rich Low_complexity Low_complexity 1 44 0 2458 90 0 31 chr20 67739998 67740320 -4413562 + AluSx SINE Alu 1 312 0 1932 179 109 2 chr20 67740336 67740738 -4413144 + L1MC1 LINE L1 5485 5929 -404 945 126 0 14 chr20 67740804 67740947 -4412935 + L1MC1 LINE L1 6188 6328 -5 22 35 0 0 chr20 67742133 67742162 -4411720 + AT_rich Low_complexity Low_complexity 1 29 0 529 254 137 39 chr20 67742927 67743365 -4410517 - L2 LINE L2 0 3272 2763 228 122 0 0 chr20 67743883 67743924 -4409958 + (TGAA)n Simple_repeat Simple_repeat 1 41 0 333 240 0 0 chr20 67744451 67744526 -4409356 + HsTC2 DNA Tc2 4 78 -1820 218 269 222 9 chr20 67745052 67745160 -4408722 + MIR SINE MIR 123 253 -9 347 313 54 12 chr20 67745687 67745853 -4408029 - MIR SINE MIR -43 219 47 1360 235 75 29 chr20 67746188 67746630 -4407252 - MLT1C LTR MaLR 0 467 6 571 264 122 100 chr20 67746936 67747667 -4406215 + MER20B DNA MER1_type 35 781 -2 454 285 98 19 chr20 67749109 67749323 -4404559 + MLT1K LTR MaLR 358 588 0 212 202 107 71 chr20 67750491 67750575 -4403307 + L2 LINE L2 3209 3295 -18 537 294 121 6 chr20 67750783 67750982 -4402900 + MIR SINE MIR 37 262 0 21 36 0 0 chr20 67752040 67752068 -4401814 + AT_rich Low_complexity Low_complexity 1 28 0 313 143 0 0 chr20 67752653 67752702 -4401180 - MER53 DNA DNA -135 54 6 2748 134 26 0 chr20 67753262 67753679 -4400203 - MSTA LTR MaLR 0 428 1 395 340 31 12 chr20 67754112 67754274 -4399608 - MIR SINE MIR -91 171 7 469 290 123 58 chr20 67754566 67754980 -4398902 + L2 LINE L2 2872 3312 -1 594 260 104 22 chr20 67755937 67756352 -4397530 + L1ME3A LINE L1 5666 6154 -16 2200 92 0 7 chr20 67757089 67757396 -4396486 - AluSg1 SINE Alu 0 305 1 394 246 102 6 chr20 67757682 67757849 -4396033 + MER113 DNA MER1_type? 8 190 -331 333 226 11 21 chr20 67757916 67758009 -4395873 + L2 LINE L2 2945 3036 -236 263 296 10 10 chr20 67758024 67758122 -4395760 + MER33 DNA MER1_type 36 133 -191 2002 98 73 7 chr20 67758142 67758429 -4395453 + AluSq SINE Alu 1 306 -7 278 222 0 28 chr20 67758434 67758506 -4395376 + MER33 DNA MER1_type 233 302 -22 517 259 15 0 chr20 67758764 67758899 -4394983 - MER96 DNA MER1_type? 0 175 39 396 258 107 31 chr20 67759468 67759627 -4394255 - MIR SINE MIR -19 243 73 197 292 15 15 chr20 67759676 67759741 -4394141 + MIR SINE MIR 118 182 -80 344 250 80 89 chr20 67759840 67760064 -4393818 - Charlie8 DNA MER1_type -1009 1408 100 1955 162 7 0 chr20 67760481 67760789 -4393093 - AluJo SINE Alu -2 310 1 184 360 36 27 chr20 67760907 67761018 -4392864 + MIR SINE MIR 31 142 -120 460 265 52 38 chr20 67761546 67761717 -4392165 + MIR SINE MIR 3 172 -57 429 301 150 34 chr20 67761797 67762336 -4391546 - L2 LINE L2 -60 3253 2648 189 0 0 0 chr20 67762657 67762678 -4391204 + (TGAA)n Simple_repeat Simple_repeat 3 23 0 327 340 57 21 chr20 67762909 67763050 -4390832 - MIR SINE MIR -41 221 76 460 267 25 54 chr20 67763121 67763361 -4390521 - L1ME4a LINE L1 -157 5964 5732 183 322 113 17 chr20 67764016 67764053 -4389829 + L2 LINE L2 2584 2616 -698 2425 72 3 0 chr20 67764053 67764346 -4389536 + AluY SINE Alu 1 294 -17 183 322 113 17 chr20 67764346 67764423 -4389459 + L2 LINE L2 2616 2709 -605 480 292 49 49 chr20 67764620 67764863 -4389019 - L1MC4a LINE L1 -1973 5835 5593 195 42 0 0 chr20 67764864 67764888 -4388994 + (T)n Simple_repeat Simple_repeat 1 24 0 2197 140 3 0 chr20 67764917 67765224 -4388658 + AluSx SINE Alu 1 308 -4 229 254 0 0 chr20 67765278 67765341 -4388541 - L1MC4a LINE L1 -2338 5470 5408 1508 230 17 68 chr20 67768208 67768691 -4385191 + MLT1C LTR MaLR 8 465 -2 985 241 66 13 chr20 67770555 67770858 -4383024 - MER46C DNA MER2_type -16 322 4 523 267 34 14 chr20 67770931 67771077 -4382805 - MLT1K LTR MaLR -8 580 432 251 270 48 32 chr20 67771360 67771486 -4382396 - MLT1L LTR MaLR -307 308 181 419 282 129 52 chr20 67771581 67771907 -4381975 - MLT1K LTR MaLR -224 364 14 646 231 28 22 chr20 67772004 67772207 -4381675 + MLT1E LTR MaLR 1 249 -346 270 160 0 0 chr20 67772207 67772257 -4381625 + CT-rich Low_complexity Low_complexity 1 50 0 225 242 121 33 chr20 67772268 67772359 -4381523 + MLT1F1 LTR MaLR 188 286 -281 329 264 23 31 chr20 67772617 67772746 -4381136 + MIR SINE MIR 19 146 -116 672 215 79 6 chr20 67773793 67774147 -4379735 + LTR52 LTR ERVL 1 406 -15 314 293 76 19 chr20 67774183 67774340 -4379542 - MIR SINE MIR -68 194 29 1955 221 55 16 chr20 67774594 67775087 -4378795 + MLT1E2 LTR MaLR 111 622 -4 974 192 24 17 chr20 67775105 67775484 -4378398 + LTR40c LTR ERVL 56 458 -4 278 323 42 10 chr20 67775687 67775783 -4378099 + L2 LINE L2 3173 3271 -1 637 250 0 0 chr20 67775876 67776004 -4377878 + FLAM_A SINE Alu 1 128 -5 638 106 19 0 chr20 67776009 67776113 -4377769 + (TAGA)n Simple_repeat Simple_repeat 1 106 0 259 355 66 14 chr20 67776125 67776551 -4377331 - Tigger8 DNA MER2_type -6 660 213 458 272 38 27 chr20 67776882 67777066 -4376816 - Charlie8 DNA MER1_type -2143 274 89 1915 143 7 10 chr20 67777099 67777392 -4376490 + AluJb SINE Alu 1 292 -20 462 224 20 0 chr20 67777463 67777561 -4376321 + L2 LINE L2 2266 2365 -949 461 246 27 9 chr20 67777872 67777982 -4375900 - MLT1I LTR MaLR -227 182 71 705 260 43 10 chr20 67778109 67778317 -4375565 + MER58A DNA MER1_type 9 223 -1 1893 139 43 13 chr20 67778363 67778664 -4375218 + AluSg SINE Alu 1 310 0 262 242 57 84 chr20 67778867 67779088 -4374794 - Charlie8 DNA MER1_type -1014 1403 97 639 199 121 18 chr20 67779259 67779425 -4374457 + L1MB5 LINE L1 5808 5990 -184 613 170 0 0 chr20 67779448 67779548 -4374334 + L1MB5 LINE L1 6066 6165 -9 904 246 67 0 chr20 67779860 67780100 -4373782 + L1ME3A LINE L1 5885 6140 -30 476 303 17 6 chr20 67780937 67781115 -4372767 + GA-rich Low_complexity Low_complexity 1 180 0 345 241 143 9 chr20 67782319 67782431 -4371451 - MIR SINE MIR -9 253 127 246 293 24 12 chr20 67784193 67784275 -4369607 + MIR SINE MIR 166 248 -14 482 250 90 5 chr20 67784334 67784596 -4369286 - LTR16C LTR ERVL -20 471 163 1375 176 46 94 chr20 67785785 67786000 -4367882 + MER96B DNA MER1_type? 42 231 -186 1779 134 33 13 chr20 67786000 67786306 -4367576 + AluJb SINE Alu 1 312 0 1375 176 46 94 chr20 67786306 67786483 -4367399 + MER96B DNA MER1_type? 231 415 -2 749 181 77 6 chr20 67786581 67786763 -4367119 + MLT1D LTR MaLR 299 493 -12 2283 97 3 0 chr20 67786778 67787087 -4366795 - AluSx SINE Alu -1 311 2 753 229 192 40 chr20 67787187 67787489 -4366393 - MLT1D LTR MaLR 0 505 158 553 221 34 20 chr20 67787874 67788023 -4365859 - MLT1D LTR MaLR -352 153 3 309 269 64 16 chr20 67788074 67788202 -4365680 + MIR SINE MIR 18 153 -55 530 305 23 6 chr20 67788298 67788472 -4365410 + MIR SINE MIR 38 214 -48 23 0 0 0 chr20 67788788 67788811 -4365071 + AT_rich Low_complexity Low_complexity 1 23 0 542 82 12 0 chr20 67788935 67789020 -4364862 + (TA)n Simple_repeat Simple_repeat 1 86 0 890 278 56 56 chr20 67789156 67789534 -4364348 + MLT2C1 LTR ERVL 20 397 0 863 248 188 40 chr20 67789859 67790279 -4363603 - MLT1H1 LTR MaLR -42 513 32 2178 183 38 34 chr20 67790313 67790816 -4363066 + MLT1D LTR MaLR 1 505 0 223 354 18 9 chr20 67791251 67791364 -4362518 + MIR SINE MIR 20 133 -129 252 141 0 78 chr20 67791409 67791473 -4362409 + MER4-int LTR ERV1 1103 1161 -5437 390 290 163 18 chr20 67791549 67791770 -4362112 + L2 LINE L2 2314 2566 -748 869 165 0 0 chr20 67792018 67792151 -4361731 + FLAM_C SINE Alu 1 133 0 589 325 56 42 chr20 67792199 67792626 -4361256 + HAL1 LINE L1 1903 2335 -172 2127 124 0 0 chr20 67793522 67793820 -4360062 + AluSx SINE Alu 1 298 -14 1235 244 88 103 chr20 67794008 67794607 -4359275 + MLT1E LTR MaLR 1 590 -3 2102 109 3 0 chr20 67794970 67795263 -4358619 - AluSc SINE Alu -15 294 1 1753 106 11 78 chr20 67795282 67795651 -4358231 - MER4A LTR ERV1 0 664 261 601 152 0 10 chr20 67795651 67795750 -4358132 - MER4A LTR ERV1 -566 98 1 936 245 57 94 chr20 67796732 67796864 -4357018 + MLT1K LTR MaLR 66 201 -387 2539 30 0 0 chr20 67796864 67797166 -4356716 + AluY SINE Alu 1 302 -9 936 245 57 94 chr20 67797166 67797576 -4356306 + MLT1K LTR MaLR 201 588 0 374 351 0 0 chr20 67797912 67798066 -4355816 + (CA)n Simple_repeat Simple_repeat 2 155 0 469 283 11 72 chr20 67799879 67800059 -4353823 - MLT1H LTR MaLR -245 304 136 599 278 23 17 chr20 67800076 67800249 -4353633 - MLT1H LTR MaLR -337 212 39 191 355 13 0 chr20 67800285 67800361 -4353521 + L2 LINE L2 2222 2298 -1016 344 342 112 6 chr20 67800393 67800554 -4353328 + L1ME4a LINE L1 5718 5895 -226 327 85 0 0 chr20 67800562 67800609 -4353273 + (CAGA)n Simple_repeat Simple_repeat 2 48 0 512 276 141 30 chr20 67800632 67800995 -4352887 - MLT1J LTR MaLR 0 511 109 1945 142 6 6 chr20 67801261 67801572 -4352310 + AluSx SINE Alu 1 311 -1 437 336 103 17 chr20 67801636 67801928 -4351954 + L2 LINE L2 2997 3313 0 245 300 17 58 chr20 67801998 67802118 -4351764 + LTR16B LTR ERVL 2 116 -348 1016 71 7 0 chr20 67802426 67802581 -4351301 + (CA)n Simple_repeat Simple_repeat 1 156 0 799 149 100 156 chr20 67803114 67803194 -4350688 - L1MB8 LINE L1 -26 6152 6069 1768 162 30 3 chr20 67803194 67803490 -4350392 + AluJb SINE Alu 1 304 -8 799 149 100 156 chr20 67803490 67803698 -4350184 - L1MB8 LINE L1 -109 6069 5880 200 323 143 39 chr20 67803952 67804231 -4349651 - L2 LINE L2 -340 2974 2667 180 213 43 21 chr20 67804696 67804743 -4349139 - MER5B DNA MER1_type -45 133 86 1869 118 11 0 chr20 67806134 67806406 -4347476 - AluSx SINE Alu -9 303 29 216 190 103 0 chr20 67806408 67806466 -4347416 - MER5A DNA MER1_type -120 69 6 256 259 17 43 chr20 67806735 67806851 -4347031 + L1MC4 LINE L1 6965 7077 -965 2464 50 0 0 chr20 67806851 67807148 -4346734 + AluY SINE Alu 1 297 -14 395 286 16 50 chr20 67807150 67807332 -4346550 + L1MC5 LINE L1 7044 7219 -742 * 2413 229 63 58 chr20 67807323 67808083 -4345799 + L1MB7 LINE L1 5397 6163 -21 1981 126 13 10 chr20 67808083 67808384 -4345498 - AluSq SINE Alu -11 302 1 2413 229 63 58 chr20 67808384 67808406 -4345476 + L1MB7 LINE L1 6163 6183 -1 1081 186 67 46 chr20 67808412 67808612 -4345270 + L1MB3 LINE L1 5893 6102 -81 2394 78 0 3 chr20 67808612 67808920 -4344962 - AluSx SINE Alu -5 307 1 1081 186 67 46 chr20 67808920 67809004 -4344878 + L1MB3 LINE L1 6102 6183 0 227 245 0 0 chr20 67809374 67809423 -4344459 + L1MC4 LINE L1 7600 7648 -394 1561 216 137 24 chr20 67809516 67809970 -4343912 + MLT1D LTR MaLR 1 505 0 2248 83 0 3 chr20 67810046 67810347 -4343535 + THE1B LTR MaLR 1 300 -64 328 205 233 2 chr20 67810339 67810441 -4343441 + MLT1D LTR MaLR 269 503 -2 * 227 356 144 5 chr20 67810619 67810827 -4343055 + L2 LINE L2 2560 2796 -518 200 285 17 62 chr20 67811011 67811190 -4342692 + C-rich Low_complexity Low_complexity 1 171 0 2228 96 0 0 chr20 67813576 67813877 -4340005 + AluSx SINE Alu 1 301 -11 3004 144 53 28 chr20 67814017 67814383 -4339499 + MER7C DNA MER2_type 21 407 -2621 3422 119 58 0 chr20 67814383 67814879 -4339003 - MER1A DNA MER1_type 0 527 3 3004 144 53 28 chr20 67814879 67815080 -4338802 + MER7C DNA MER2_type 407 602 0 340 263 20 0 chr20 67816182 67816281 -4337601 + MIR SINE MIR 58 158 -104 532 172 22 60 chr20 67816295 67816429 -4337453 + MER5A DNA MER1_type 38 166 -23 1556 175 27 10 chr20 67816581 67816878 -4337004 - AluJb SINE Alu -2 310 9 2460 155 45 43 chr20 67816915 67817217 -4336665 + L1MB5 LINE L1 5598 5903 -271 2067 130 0 0 chr20 67817217 67817510 -4336372 + AluSx SINE Alu 3 295 -17 2460 155 45 43 chr20 67817510 67817724 -4336158 + L1MB5 LINE L1 5903 6115 -59 1646 147 42 35 chr20 67817768 67818054 -4335828 + AluJb SINE Alu 1 288 -24 229 314 59 25 chr20 67818352 67818470 -4335412 - L1MC/D LINE L1 -2059 5749 5628 306 73 0 0 chr20 67818582 67818623 -4335259 + (CA)n Simple_repeat Simple_repeat 1 41 0 270 0 0 0 chr20 67819331 67819361 -4334521 + (TAA)n Simple_repeat Simple_repeat 2 31 0 216 288 45 45 chr20 67819430 67819541 -4334341 - MIR SINE MIR -81 127 17 200 337 20 20 chr20 67819644 67819745 -4334137 - MIR SINE MIR -63 145 45 747 318 36 10 chr20 67819747 67820049 -4333833 + MER113 DNA MER1_type? 212 521 0 2421 62 0 0 chr20 67820491 67820795 -4333087 - AluY SINE Alu -7 304 1 2256 100 0 0 chr20 67822818 67823117 -4330765 + AluSg SINE Alu 1 299 -11 311 273 97 42 chr20 67825004 67825169 -4328713 + L2 LINE L2 3121 3294 -19 384 40 0 0 chr20 67826151 67826201 -4327681 + (GA)n Simple_repeat Simple_repeat 2 51 0 252 0 0 0 chr20 67826361 67826389 -4327493 + (TG)n Simple_repeat Simple_repeat 2 29 0 1402 106 0 20 chr20 67826394 67826592 -4327290 - AluSx SINE Alu -118 194 1 204 265 0 0 chr20 67827867 67827916 -4325966 + G-rich Low_complexity Low_complexity 4 52 0 728 236 42 38 chr20 67829326 67829481 -4324401 - MER20 DNA MER1_type -2 217 59 1887 164 7 0 chr20 67829481 67829774 -4324108 + AluJb SINE Alu 1 295 -17 728 236 42 38 chr20 67829774 67829830 -4324052 - MER20 DNA MER1_type -160 59 5 249 229 71 0 chr20 67830077 67830147 -4323735 - MIR SINE MIR -74 188 114 39 60 0 0 chr20 67834242 67834309 -4319573 + GC_rich Low_complexity Low_complexity 1 67 0 21 0 0 0 chr20 67835757 67835778 -4318104 + AT_rich Low_complexity Low_complexity 1 21 0 433 260 24 24 chr20 67838689 67838816 -4315066 + MIR SINE MIR 16 142 -120 209 273 76 70 chr20 67839042 67839214 -4314668 - MIR SINE MIR -55 207 35 445 123 12 0 chr20 67839430 67839511 -4314371 - L1PB1 LINE L1 -100 6051 5970 308 200 0 31 chr20 67839850 67839915 -4313967 + L1MC5 LINE L1 7845 7907 -54 274 250 92 0 chr20 67839983 67840059 -4313823 + MIR3 SINE MIR 77 159 -49 1184 119 0 0 chr20 67840100 67840259 -4313623 - AluSg/x SINE Alu -12 298 140 196 262 66 0 chr20 67840621 67840682 -4313200 + L2 LINE L2 3231 3295 -18 206 296 57 45 chr20 67840711 67840799 -4313083 + MIR3 SINE MIR 86 174 -34 207 88 0 0 chr20 67841948 67841982 -4311900 + (CAA)n Simple_repeat Simple_repeat 2 35 0 240 306 0 0 chr20 67849768 67849830 -4304052 + (CA)n Simple_repeat Simple_repeat 1 62 0 333 0 0 0 chr20 67849988 67850025 -4303857 + (CA)n Simple_repeat Simple_repeat 2 38 0 495 0 0 0 chr20 67854003 67854058 -4299824 + (TTTA)n Simple_repeat Simple_repeat 2 56 0 1881 121 0 8 chr20 67854061 67854318 -4299564 - AluSx SINE Alu -29 283 29 1207 194 49 60 chr20 67854605 67854955 -4298927 + LTR37A LTR ERV1 79 424 -2 2383 84 10 26 chr20 67855117 67855428 -4298454 + AluSg SINE Alu 5 310 0 281 233 39 58 chr20 67855617 67855720 -4298162 - L2 LINE L2 -13 3259 3159 310 221 87 19 chr20 67855957 67856061 -4297821 - MER5B DNA MER1_type -1 177 67 341 287 47 8 chr20 67857786 67857915 -4295967 - MIR SINE MIR -58 204 71 183 80 0 0 chr20 67857993 67858018 -4295864 + (A)n Simple_repeat Simple_repeat 1 25 0 5341 158 38 6 chr20 67858113 67859716 -4294166 + L1PB3 LINE L1 4124 5782 -372 1273 159 28 5 chr20 67859716 67859930 -4293952 + AluJo SINE Alu 87 305 -7 194 122 24 0 chr20 67859930 67859952 -4293930 + (TA)n Simple_repeat Simple_repeat 1 21 -21 2524 107 3 21 chr20 67859952 67860335 -4293547 + L1PB3 LINE L1 5775 6150 -4 194 122 24 0 chr20 67860335 67860353 -4293529 + (TA)n Simple_repeat Simple_repeat 21 42 0 1024 223 89 87 chr20 67860383 67860890 -4292992 + L1ME LINE L1 344 851 -5219 492 245 61 20 chr20 67860892 67861039 -4292843 + L1ME LINE L1 11 163 -5907 1899 267 57 49 chr20 67861072 67862391 -4291491 + L1ME LINE L1 371 1761 -4500 2255 140 83 15 chr20 67862391 67862790 -4291092 + MSTA LTR MaLR 3 428 0 1899 267 57 49 chr20 67862790 67862875 -4291007 + L1ME LINE L1 1761 1844 -4417 875 236 90 10 chr20 67862901 67863325 -4290557 + L1ME LINE L1 1972 2387 -3693 * 2114 241 88 7 chr20 67863316 67864017 -4289865 + L1ME LINE L1 2935 3692 -2388 2086 219 115 15 chr20 67864047 67864631 -4289251 + L1MC4 LINE L1 7207 7848 -194 21 36 0 0 chr20 67864651 67864679 -4289203 + AT_rich Low_complexity Low_complexity 1 28 0 313 213 8 197 chr20 67864679 67864933 -4288949 + L1MC4 LINE L1 7837 8042 0 368 242 25 25 chr20 67864986 67865106 -4288776 + GA-rich Low_complexity Low_complexity 3 122 0 313 282 94 55 chr20 67865866 67866047 -4287835 - L2 LINE L2 0 3272 3085 1016 71 0 0 chr20 67868486 67868612 -4285270 - L1PA6 LINE L1 -237 5917 5792 1606 60 0 0 chr20 67868612 67868806 -4285076 + L1PA5 LINE L1 5956 6154 0 233 269 43 85 chr20 67869536 67869677 -4284205 + L2 LINE L2 3138 3272 0 202 391 0 18 chr20 67870210 67870320 -4283562 - L2 LINE L2 -607 2707 2600 959 249 175 32 chr20 67870672 67871113 -4282769 + MLT1D LTR MaLR 2 505 0 627 286 56 0 chr20 67871946 67872177 -4281705 + MIR SINE MIR 13 256 -6 209 250 214 9 chr20 67873326 67873438 -4280444 - L2 LINE L2 -4 3268 3134 252 0 0 0 chr20 67875214 67875242 -4278640 + (CA)n Simple_repeat Simple_repeat 1 28 0 478 30 0 30 chr20 67875315 67875381 -4278501 + L1PA6 LINE L1 6091 6154 0 1707 236 39 123 chr20 67875396 67876391 -4277491 + L1MC5 LINE L1 6917 7811 -150 2254 128 0 0 chr20 67876391 67876697 -4277185 - AluSx SINE Alu -6 306 1 1707 236 39 123 chr20 67876697 67876809 -4277073 + L1MC5 LINE L1 7811 7931 -30 28 0 0 0 chr20 67877151 67877179 -4276703 + AT_rich Low_complexity Low_complexity 1 28 0 2751 221 64 13 chr20 67879613 67880566 -4273316 + L1ME1 LINE L1 1627 2592 -3623 1577 173 121 39 chr20 67880581 67881044 -4272838 + L1ME1 LINE L1 4891 5391 -824 636 194 62 38 chr20 67881049 67881209 -4272673 + L1MB8 LINE L1 5686 5849 -335 180 0 0 0 chr20 67881223 67881243 -4272639 + (A)n Simple_repeat Simple_repeat 1 20 0 649 107 0 0 chr20 67881247 67881331 -4272551 - FRAM SINE Alu -33 143 60 1711 172 6 15 chr20 67881331 67881663 -4272219 + L1MB8 LINE L1 5844 6172 -6 262 182 141 10 chr20 67881671 67881770 -4272112 + L1ME1 LINE L1 5384 5495 -738 1919 158 0 3 chr20 67881771 67882069 -4271813 + AluJb SINE Alu 1 297 -15 1212 176 16 20 chr20 67882071 67882315 -4271567 + L1MD3 LINE L1 7657 7899 -96 746 233 36 72 chr20 67882317 67882540 -4271342 - MER20 DNA MER1_type -4 215 1 358 214 11 11 chr20 67882545 67882634 -4271248 + L1MD1 LINE L1 6146 6234 -8 2574 210 61 29 chr20 67882658 67883394 -4270488 + L1ME1 LINE L1 5483 6403 0 314 282 81 81 chr20 67884340 67884512 -4269370 + L1ME4a LINE L1 5735 5909 -212 2356 108 0 0 chr20 67884512 67884819 -4269063 - AluSc SINE Alu -2 307 1 314 282 81 81 chr20 67884819 67884880 -4269002 + L1ME4a LINE L1 5908 5968 -153 1962 126 0 0 chr20 67885067 67885337 -4268545 + AluSx SINE Alu 41 310 -2 346 230 38 7 chr20 67885737 67885839 -4268043 + L1MC2 LINE L1 6244 7785 0 2932 231 68 45 chr20 67885858 67886705 -4267177 + L1ME LINE L1 1651 2477 -3738 1900 112 112 0 chr20 67886705 67886981 -4266901 + AluSx SINE Alu 1 307 -5 2932 231 68 45 chr20 67886981 67887891 -4265991 + L1ME LINE L1 2477 3410 -2805 267 298 0 50 chr20 67887884 67888005 -4265877 + L1MC5 LINE L1 7161 7275 -686 * 647 182 146 123 chr20 67888044 67888572 -4265310 + L1MC5 LINE L1 7238 7777 -184 1216 275 85 32 chr20 67888625 67889130 -4264752 + L1ME LINE L1 4548 5079 -1136 922 174 78 62 chr20 67889282 67889524 -4264358 + AluJo SINE Alu 65 310 -2 1095 252 37 47 chr20 67889527 67889906 -4263976 + L1ME LINE L1 5221 5599 -640 1996 114 46 7 chr20 67889906 67890186 -4263696 + AluSx SINE Alu 1 291 -21 1095 252 37 47 chr20 67890186 67890379 -4263503 + L1ME LINE L1 5599 5792 -447 2589 71 0 0 chr20 67890767 67891076 -4262806 - AluY SINE Alu -2 309 1 2292 108 0 7 chr20 67892706 67893012 -4260870 - AluSx SINE Alu -8 304 1 247 292 18 44 chr20 67893066 67893179 -4260703 + MIR SINE MIR 25 134 -128 440 274 80 11 chr20 67893866 67894041 -4259841 - MIR SINE MIR 0 262 76 2255 110 7 0 chr20 67894465 67894766 -4259116 + AluSx SINE Alu 1 303 -9 1639 207 0 7 chr20 67896140 67896445 -4257437 + AluJo SINE Alu 1 303 -9 1917 218 36 68 chr20 67896559 67897225 -4256657 + L1ME LINE L1 432 1076 -5129 1153 282 74 56 chr20 67897216 67897468 -4256414 + L1ME LINE L1 1299 1545 -4851 * 1783 25 0 5 chr20 67897468 67897667 -4256215 - AluY SINE Alu -5 306 109 1153 282 74 56 chr20 67897667 67898133 -4255749 + L1ME LINE L1 1545 2030 -4366 721 169 65 0 chr20 67898147 67898271 -4255611 - FLAM_A SINE Alu 0 133 2 2443 86 3 0 chr20 67898271 67898573 -4255309 - AluSp SINE Alu -10 303 1 181 162 0 54 chr20 67898651 67898688 -4255194 + L2 LINE L2 3261 3295 -18 667 231 129 16 chr20 67899399 67899655 -4254227 - MER113 DNA MER1_type? -73 448 164 937 169 40 67 chr20 67900247 67900472 -4253410 - MER20 DNA MER1_type 0 219 1 384 263 214 15 chr20 67900529 67900791 -4253091 + L2 LINE L2 2810 3123 -190 1404 201 58 4 chr20 67901065 67901339 -4252543 + AluJo SINE Alu 1 289 -23 1909 103 107 0 chr20 67901368 67901640 -4252242 + AluSx SINE Alu 1 301 -11 885 113 16 0 chr20 67902495 67902619 -4251263 + AluJb SINE Alu 161 286 -26 2167 99 0 62 chr20 67904708 67905030 -4248852 - AluSq SINE Alu -11 302 1 1378 268 49 8 chr20 67905388 67905739 -4248143 - L1ME3A LINE L1 -103 6067 5690 2173 87 14 0 chr20 67905739 67906026 -4247856 + AluSc SINE Alu 1 291 -18 1378 268 49 8 chr20 67906026 67906132 -4247750 - L1ME3A LINE L1 -480 5690 5590 237 378 28 0 chr20 67906386 67906529 -4247353 + L2 LINE L2 1830 1976 -1338 395 248 91 40 chr20 67907167 67907365 -4246517 + L2 LINE L2 2699 2906 -408 548 313 0 0 chr20 67907584 67907718 -4246164 + L2 LINE L2 3139 3272 0 522 179 57 0 chr20 67907748 67907854 -4246028 + MIR SINE MIR 8 119 -143 2336 121 0 0 chr20 67908316 67908622 -4245260 - AluSx SINE Alu -6 306 1 919 233 104 0 chr20 67909339 67909541 -4244341 + MER58A DNA MER1_type 2 224 0 633 263 97 41 chr20 67910255 67910669 -4243213 - L1MC5 LINE L1 -48 7913 7477 2487 68 0 0 chr20 67911351 67911647 -4242235 + AluY SINE Alu 1 296 -15 336 242 81 0 chr20 67911677 67911776 -4242106 + MIR SINE MIR 66 172 -90 320 256 88 24 chr20 67911892 67912017 -4241865 - MIR SINE MIR -72 190 58 330 222 107 20 chr20 67912455 67912723 -4241159 + MLT1H LTR MaLR 212 595 0 655 290 52 24 chr20 67912948 67913200 -4240682 - MIR SINE MIR 0 262 4 1900 85 88 0 chr20 67913242 67913529 -4240353 - AluSg SINE Alu 0 310 1 2585 59 0 0 chr20 67913574 67913878 -4240004 + AluY SINE Alu 1 304 -7 184 285 109 58 chr20 67914071 67914208 -4239674 + L2 LINE L2 3119 3262 -10 311 327 0 0 chr20 67915085 67915250 -4238632 + (CGGGG)n Simple_repeat Simple_repeat 5 169 0 28 48 0 0 chr20 67915259 67915301 -4238581 + GC_rich Low_complexity Low_complexity 1 42 0 23 0 0 0 chr20 67915566 67915589 -4238293 + GC_rich Low_complexity Low_complexity 1 23 0 2107 118 7 0 chr20 67917591 67917879 -4236003 - AluSq SINE Alu -23 290 1 1019 185 46 6 chr20 67917920 67918093 -4235789 - AluJb SINE Alu -49 263 84 2528 64 3 10 chr20 67918094 67918407 -4235475 - AluY SINE Alu 0 311 1 254 292 52 31 chr20 67919316 67919372 -4234510 - L2 LINE L2 -18 3295 3235 874 221 67 0 chr20 67919372 67919580 -4234302 + MER58A DNA MER1_type 1 222 -2 254 292 52 31 chr20 67919580 67919619 -4234263 - L2 LINE L2 -78 3235 3198 2054 129 0 49 chr20 67919658 67919983 -4233899 - AluSx SINE Alu -3 309 1 2444 95 0 0 chr20 67920177 67920483 -4233399 + AluSx SINE Alu 1 306 -6 196 273 45 64 chr20 67921621 67921731 -4232151 + L2 LINE L2 2898 3005 -267 455 230 93 81 chr20 67922633 67922723 -4231159 + MIR SINE MIR 10 97 -165 2314 102 0 0 chr20 67922723 67923016 -4230866 - AluSq SINE Alu -20 293 1 455 230 93 81 chr20 67923016 67923173 -4230709 + MIR SINE MIR 97 260 -2 2537 38 41 0 chr20 67923173 67923464 -4230418 - AluY SINE Alu -8 303 1 1521 166 33 46 chr20 67923469 67923776 -4230106 - AluJo SINE Alu -1 311 9 413 261 81 87 chr20 67923825 67923999 -4229883 - HAL1 LINE L1 -2 2505 2332 908 127 122 127 chr20 67923999 67924236 -4229646 + MER46A DNA MER2_type 1 236 0 413 261 81 87 chr20 67924236 67924394 -4229488 - HAL1 LINE L1 -175 2332 2175 546 289 61 15 chr20 67924420 67924617 -4229265 + MIR SINE MIR 36 241 -21 1469 241 45 0 chr20 67924953 67925334 -4228548 - L1MDa LINE L1 -1261 4954 4557 2542 218 70 78 chr20 67925342 67926395 -4227487 - L1MDa LINE L1 -2091 4124 3065 2076 122 0 17 chr20 67926395 67926528 -4227354 + AluSx SINE Alu 4 138 -174 2407 85 0 3 chr20 67926528 67926833 -4227049 + AluSc SINE Alu 1 304 -5 2076 122 0 17 chr20 67926833 67926994 -4226888 + AluSx SINE Alu 138 293 -19 2542 218 70 78 chr20 67926994 67927439 -4226443 - L1MDa LINE L1 -3150 3065 2489 1553 191 14 4 chr20 67927439 67927717 -4226165 - AluJb SINE Alu -30 282 2 2542 218 70 78 chr20 67927717 67927979 -4225903 - L1MDa LINE L1 -3726 2489 2227 253 157 20 0 chr20 67928014 67928065 -4225817 - Charlie5 DNA MER1_type -2518 94 43 300 241 12 0 chr20 67928092 67928175 -4225707 - L1MDa LINE L1 -4122 2274 2191 688 257 109 4 chr20 67928176 67928441 -4225441 - L1MDa LINE L1 -4261 2135 1843 1302 271 95 67 chr20 67928441 67929257 -4224625 - L1M4 LINE L1 -1340 4806 3932 673 213 0 22 chr20 67929257 67929393 -4224489 - FLAM_A SINE Alu 0 133 1 1302 271 95 67 chr20 67929393 67929998 -4223884 - L1M4 LINE L1 -2214 3932 3345 1203 283 55 32 chr20 67930027 67930207 -4223675 - L1M4 LINE L1 -2949 3197 3023 2537 66 0 0 chr20 67930207 67930509 -4223373 + AluSc SINE Alu 1 302 -7 2494 64 0 7 chr20 67930515 67930811 -4223071 + AluSc SINE Alu 2 295 -14 2302 101 0 0 chr20 67930816 67931113 -4222769 + AluSg SINE Alu 1 297 -13 1203 283 55 32 chr20 67931113 67931699 -4222183 - L1M4 LINE L1 -3130 3016 2394 340 217 9 19 chr20 67931730 67931836 -4222046 - L1M4 LINE L1 -3833 2313 2209 * 1491 203 60 76 chr20 67931831 67932344 -4221538 - L1ME2 LINE L1 -68 6030 5526 1183 201 104 44 chr20 67932349 67932644 -4221238 - L1ME2 LINE L1 -1889 4191 3866 684 178 119 0 chr20 67932644 67932762 -4221120 + FLAM_C SINE Alu 1 132 -1 1183 201 104 44 chr20 67932762 67932849 -4221033 - L1ME2 LINE L1 -2214 3866 3786 2123 197 133 4 chr20 67932857 67933323 -4220559 - MLT1F1 LTR MaLR -13 554 29 1330 257 148 14 chr20 67933372 67933813 -4220069 + L1MC4 LINE L1 7476 7991 -51 1815 155 21 7 chr20 67933813 67934097 -4219785 - AluJo SINE Alu -24 288 1 1330 257 148 14 chr20 67934097 67934149 -4219733 + L1MC4 LINE L1 7991 8035 -7 1154 272 74 59 chr20 67934491 67934676 -4219206 - L1ME2 LINE L1 -4578 1683 1502 2333 94 0 0 chr20 67934676 67934973 -4218909 - AluY SINE Alu -14 297 1 1154 272 74 59 chr20 67934973 67935501 -4218381 - L1ME2 LINE L1 -4759 1502 893 1634 206 32 41 chr20 67935501 67935845 -4218037 - MER2 DNA MER2_type -2 342 2 1154 272 74 59 chr20 67935845 67936228 -4217654 - L1ME2 LINE L1 -5368 893 517 391 309 57 106 chr20 67936386 67936651 -4217231 - L1ME2 LINE L1 -5543 527 276 637 283 164 45 chr20 67936667 67937087 -4216795 + L2 LINE L2 2832 3301 -12 305 266 119 14 chr20 67937738 67937881 -4216001 + L1MCc LINE L1 -520 4294966933 -6227 843 260 63 72 chr20 67938160 67938617 -4215265 + L1MCc LINE L1 1269 1729 -4655 2045 114 4 4 chr20 67938617 67938897 -4214985 + AluSx SINE Alu 1 280 -32 450 0 0 0 chr20 67938897 67938947 -4214935 + (TAAA)n Simple_repeat Simple_repeat 4 53 0 843 260 63 72 chr20 67938947 67939112 -4214770 + L1MCc LINE L1 1727 1738 -4646 591 225 47 75 chr20 67939155 67939408 -4214474 + L1MCc LINE L1 2049 2294 -4269 1245 228 0 12 chr20 67939409 67939664 -4214218 + AluJo SINE Alu 1 252 -60 21 0 0 0 chr20 67939664 67939685 -4214197 + AT_rich Low_complexity Low_complexity 1 21 0 2197 103 0 13 chr20 67939685 67939986 -4213896 + AluSq SINE Alu 1 297 -16 332 258 22 16 chr20 67940176 67940282 -4213600 + L1ME3 LINE L1 5980 6083 -81 379 214 83 77 chr20 67940299 67940467 -4213415 - L1M4 LINE L1 -1916 4230 4062 * 1129 214 104 3 chr20 67940464 67940852 -4213030 + L1ME2 LINE L1 5462 5973 -191 279 254 9 45 chr20 67940903 67941013 -4212869 + L1MC4a LINE L1 5607 5712 -2096 323 331 71 49 chr20 67941014 67941322 -4212560 + L1MC4a LINE L1 5749 6063 -1745 2222 87 0 7 chr20 67941628 67941948 -4211934 - AluSx SINE Alu 0 318 1 1256 226 52 12 chr20 67942704 67943143 -4210739 - MLT1D LTR MaLR 0 505 15 338 264 209 41 chr20 67943345 67943565 -4210317 + MIR SINE MIR 6 262 0 2266 110 7 0 chr20 67943654 67943962 -4209920 - AluSq SINE Alu -3 310 1 277 293 92 67 chr20 67946270 67946553 -4207329 - L2 LINE L2 -84 3229 2940 208 232 116 29 chr20 67947837 67947906 -4205976 - L2 LINE L2 -5 3267 3193 182 273 91 0 chr20 67949875 67949919 -4203963 + L2 LINE L2 3215 3262 -10 596 312 105 39 chr20 67951616 67952437 -4201445 + L2 LINE L2 2407 3313 0 247 181 200 57 chr20 67952511 67952616 -4201266 + L2 LINE L2 3169 3288 -25 2361 89 0 0 chr20 67953580 67953873 -4200009 + AluSx SINE Alu 1 293 -19 1030 207 10 30 chr20 67954251 67954333 -4199549 + MER58A DNA MER1_type 26 108 -2312 1433 110 101 0 chr20 67954333 67954542 -4199340 + MER30 DNA MER1_type 1 230 0 1030 207 10 30 chr20 67954542 67954662 -4199220 + MER58A DNA MER1_type 108 224 0 521 268 141 42 chr20 67954786 67955099 -4198783 + L1ME LINE L1 350 693 -5679 1887 279 120 33 chr20 67955405 67955615 -4198267 + L1ME LINE L1 818 1008 -5555 794 203 0 0 chr20 67955615 67955748 -4198134 + FLAM_C SINE Alu 1 133 0 1887 279 120 33 chr20 67955748 67956695 -4197187 + L1ME LINE L1 1008 1872 -4691 1920 150 14 0 chr20 67956695 67956989 -4196893 + AluSx SINE Alu 3 300 -12 1887 279 120 33 chr20 67956989 67957167 -4196715 + L1ME LINE L1 1872 2033 -4530 2324 70 3 0 chr20 67957167 67957451 -4196431 + AluSp SINE Alu 1 285 -28 1887 279 120 33 chr20 67957451 67957670 -4196212 + L1ME LINE L1 2033 2623 -3940 264 304 87 7 chr20 67957690 67957828 -4196054 + L1ME1 LINE L1 5987 6135 -31 608 308 171 3 chr20 67960415 67960707 -4193175 - L2 LINE L2 0 3313 2973 246 297 199 14 chr20 67960847 67961133 -4192749 - MER102b DNA MER1_type -1 340 2 1556 183 7 30 chr20 67961175 67961475 -4192407 + AluJb SINE Alu 3 295 -17 2273 101 3 3 chr20 67961664 67961962 -4191920 + AluSq SINE Alu 1 298 -15 1086 273 118 67 chr20 67962154 67963224 -4190658 - L1ME3 LINE L1 -7 6155 5029 364 315 84 42 chr20 67963543 67963686 -4190196 - L2 LINE L2 -1 3271 3123 375 273 9 28 chr20 67963874 67963980 -4189902 + L1MC4a LINE L1 5509 5609 -633 759 257 76 42 chr20 67964055 67964248 -4189634 + L1MC4a LINE L1 5616 5824 -1984 2124 133 0 3 chr20 67964248 67964548 -4189334 + AluSx SINE Alu 1 299 -13 759 257 76 42 chr20 67964548 67964642 -4189240 + L1MC4a LINE L1 5824 5913 -1895 1153 202 65 0 chr20 67964882 67965130 -4188752 + L1MD3 LINE L1 7729 7992 -3 180 0 0 0 chr20 67965131 67965151 -4188731 + (T)n Simple_repeat Simple_repeat 1 20 0 623 208 20 47 chr20 68018320 68018469 -4135413 - MER20 DNA MER1_type -57 162 18 1902 151 0 43 chr20 68020713 68021037 -4132845 - AluJb SINE Alu -2 310 1 736 217 136 49 chr20 68021130 68021416 -4132466 + MER33 DNA MER1_type 1 311 -13 1929 98 62 0 chr20 68021451 68021725 -4132157 + AluSx SINE Alu 22 312 0 21 0 0 0 chr20 68022054 68022075 -4131807 + AT_rich Low_complexity Low_complexity 1 21 0 268 339 21 48 chr20 68022779 68022965 -4130917 + MIR SINE MIR 2 182 -80 270 329 39 26 chr20 68023034 68023189 -4130693 + L2 LINE L2 3149 3305 -8 255 61 0 0 chr20 68023314 68023347 -4130535 + (TGAA)n Simple_repeat Simple_repeat 2 34 0 190 323 43 21 chr20 68025323 68025416 -4128466 + L2 LINE L2 3216 3310 -3 403 89 5 5 chr20 68025510 68025579 -4128303 - L1MB1 LINE L1 -1 6167 6110 255 365 83 17 chr20 68025700 68025930 -4127952 - MIR SINE MIR -17 245 1 2251 115 3 0 chr20 68026968 68027316 -4126566 - AluSx SINE Alu 0 312 1 1504 226 8 11 chr20 68027324 68027691 -4126191 - L1MB8 LINE L1 0 6178 5813 311 245 69 35 chr20 68028022 68028164 -4125718 - MIR SINE MIR -13 249 99 304 353 85 13 chr20 68028977 68029130 -4124752 - MIR SINE MIR -75 187 24 468 333 25 10 chr20 68029263 68029464 -4124418 - L2 LINE L2 -174 3098 2895 256 292 124 44 chr20 68030356 68030493 -4123389 - L2 LINE L2 -2 3311 3164 313 318 27 0 chr20 68031396 68031506 -4122376 + MER103 DNA DNA 44 156 -10 207 319 0 0 chr20 68031648 68031717 -4122165 + (TTCA)n Simple_repeat Simple_repeat 2 70 0 438 53 0 0 chr20 68031719 68031776 -4122106 + (TCCA)n Simple_repeat Simple_repeat 3 59 0 775 265 123 45 chr20 68032639 68033536 -4120346 - L2 LINE L2 -95 3218 2254 524 240 26 105 chr20 68033544 68033773 -4120109 + MLT1K LTR MaLR 378 588 0 185 360 0 0 chr20 68033904 68033990 -4119892 + MIR SINE MIR 45 130 -78 195 204 61 0 chr20 68035613 68035662 -4118220 - MIR SINE MIR -194 68 17 232 296 56 0 chr20 68035675 68035746 -4118136 - MER5A DNA MER1_type -5 184 110 316 276 105 50 chr20 68036132 68036371 -4117511 - L2 LINE L2 -465 2849 2598 327 331 0 25 chr20 68036391 68036551 -4117331 + L1ME1 LINE L1 545 700 -5696 422 284 76 5 chr20 68036678 68036889 -4116993 + L1MEc LINE L1 1705 1930 -4466 * 2956 244 136 12 chr20 68036874 68038675 -4115207 + L1ME1 LINE L1 788 2797 -3418 475 268 39 0 chr20 68038680 68038807 -4115075 + L1ME1 LINE L1 5527 5658 -577 1361 174 23 0 chr20 68038817 68038909 -4114973 - AluJb SINE Alu -88 224 136 225 0 0 0 chr20 68038909 68038934 -4114948 + (TG)n Simple_repeat Simple_repeat 2 26 0 1361 174 23 0 chr20 68038934 68039060 -4114822 - AluJb SINE Alu -176 136 1 1698 206 92 37 chr20 68039060 68039493 -4114389 + L1ME1 LINE L1 5647 6103 -132 1294 183 24 66 chr20 68039514 68039881 -4114001 + L1ME LINE L1 5179 5523 -643 2273 90 0 52 chr20 68039881 68040191 -4113691 - AluSx SINE Alu 0 312 19 1294 183 24 66 chr20 68040191 68040290 -4113592 + L1ME LINE L1 5523 5625 -541 2265 105 3 0 chr20 68040538 68040833 -4113049 - AluSx SINE Alu -11 301 6 2463 50 0 0 chr20 68040846 68041177 -4112705 - AluY SINE Alu 0 331 1 524 226 219 0 chr20 68042285 68042431 -4111451 - MER45A DNA AcHobo 0 178 1 378 189 234 9 chr20 68043213 68043324 -4110558 + MIR SINE MIR 52 187 -75 364 304 120 24 chr20 68043616 68043866 -4110016 + L2 LINE L2 3040 3313 0 189 121 0 0 chr20 68043881 68043914 -4109968 + (CAGAGA)n Simple_repeat Simple_repeat 2 34 0 218 320 90 22 chr20 68043924 68044146 -4109736 - L2 LINE L2 -413 2901 2665 181 158 79 0 chr20 68044244 68044282 -4109600 + MIR SINE MIR 74 114 -94 2331 114 0 3 chr20 68048441 68048747 -4105135 - AluSx SINE Alu -7 305 1 898 239 0 0 chr20 68049263 68049443 -4104439 + MER58A DNA MER1_type 45 224 0 276 293 43 35 chr20 68049713 68049829 -4104053 - MIR SINE MIR -38 224 108 323 284 79 8 chr20 68050260 68050387 -4103495 + L2 LINE L2 2507 2642 -672 408 227 7 0 chr20 68050390 68050550 -4103332 + (TCCA)n Simple_repeat Simple_repeat 1 161 0 209 289 84 0 chr20 68050552 68050635 -4103247 - L2 LINE L2 -16 3297 3208 481 285 8 0 chr20 68050773 68050903 -4102979 + MER94 DNA DNA 1 131 -3 2349 100 0 3 chr20 68051016 68051316 -4102566 + AluSg SINE Alu 1 299 -11 375 224 84 9 chr20 68051698 68051805 -4102077 + L2 LINE L2 3136 3250 -22 399 284 117 19 chr20 68053094 68053358 -4100524 - LTR33 LTR ERVL -52 469 180 263 164 0 197 chr20 68053523 68053645 -4100237 - MER102b DNA MER1_type -1 340 243 343 350 19 25 chr20 68054289 68054446 -4099436 - MIR SINE MIR -45 163 8 283 352 37 37 chr20 68054419 68054689 -4099193 + L2 LINE L2 2962 3231 -41 * 198 103 0 0 chr20 68054695 68054724 -4099158 + (TAA)n Simple_repeat Simple_repeat 1 29 0 312 337 203 0 chr20 68054743 68054906 -4098976 - MIR SINE MIR -19 243 48 654 303 21 0 chr20 68054988 68055176 -4098706 - MER58A DNA MER1_type -21 203 12 247 200 80 27 chr20 68055197 68055272 -4098610 - HsTC2 DNA Tc2 -1814 84 6 2303 107 0 0 chr20 68056858 68057157 -4096725 - AluSx SINE Alu -13 299 1 384 304 69 28 chr20 68057465 68057656 -4096226 + MIR SINE MIR 21 217 -45 323 77 0 19 chr20 68057840 68057892 -4095990 + (GA)n Simple_repeat Simple_repeat 1 51 0 1279 262 41 23 chr20 68058129 68058527 -4095355 - MLT1K LTR MaLR -4 584 106 2079 131 39 28 chr20 68058527 68058885 -4094997 + THE1B LTR MaLR 1 362 -2 1279 262 41 23 chr20 68058885 68058971 -4094911 - MLT1K LTR MaLR -482 106 23 26 30 0 0 chr20 68059451 68059484 -4094398 + AT_rich Low_complexity Low_complexity 1 33 0 619 230 36 30 chr20 68060164 68060329 -4093553 + MIR SINE MIR 80 245 -17 326 123 18 0 chr20 68060487 68060544 -4093338 + CT-rich Low_complexity Low_complexity 2 59 0 757 155 24 6 chr20 68060556 68060724 -4093158 + CT-rich Low_complexity Low_complexity 1 171 0 825 303 129 5 chr20 68060724 68061242 -4092640 - L2 LINE L2 -1 3312 2736 250 218 0 0 chr20 68061905 68061960 -4091922 + MER103 DNA DNA 30 84 -82 471 303 106 66 chr20 68061993 68062416 -4091466 + LTR16C LTR ERVL 43 482 -9 339 245 21 0 chr20 68062447 68062541 -4091341 + MER103 DNA DNA 26 121 -45 187 273 34 80 chr20 68062702 68062790 -4091092 - MIR SINE MIR -165 97 14 279 194 276 51 chr20 68063752 68063850 -4090032 + L2 LINE L2 3186 3305 -8 466 112 80 23 chr20 68063851 68064264 -4089618 + (TCTA)n Simple_repeat Simple_repeat 1 389 -435 2312 96 0 0 chr20 68064264 68064577 -4089305 + AluSx SINE Alu 1 313 0 466 112 80 23 chr20 68064577 68064631 -4089251 + (TCTA)n Simple_repeat Simple_repeat 389 824 0 797 327 21 12 chr20 68064640 68064973 -4088909 - L1ME4a LINE L1 -187 5934 5599 408 268 8 41 chr20 68065422 68065545 -4088337 + MIR SINE MIR 5 123 -139 274 387 29 7 chr20 68065732 68065869 -4088013 + L2 LINE L2 3133 3272 0 496 42 14 14 chr20 68066060 68066132 -4087750 + (GA)n Simple_repeat Simple_repeat 2 73 0 231 88 0 0 chr20 68066652 68066686 -4087196 + (TGAA)n Simple_repeat Simple_repeat 2 35 0 312 178 41 14 chr20 68067302 68067375 -4086507 - MIR SINE MIR -71 191 117 1482 224 135 0 chr20 68067593 68068036 -4085846 + MLT1D LTR MaLR 3 505 0 331 257 28 37 chr20 68068683 68068792 -4085090 + MIR3 SINE MIR 10 117 -91 221 265 176 0 chr20 68068865 68068933 -4084949 + L2 LINE L2 3191 3270 -2 259 96 39 0 chr20 68069334 68069386 -4084496 + (TGGA)n Simple_repeat Simple_repeat 3 56 0 554 185 9 9 chr20 68069603 68069711 -4084171 + MER103 DNA DNA 14 121 -45 2184 121 3 13 chr20 68070536 68070849 -4083033 + AluSx SINE Alu 1 310 -2 1033 211 38 0 chr20 68071143 68071356 -4082526 + MER58A DNA MER1_type 2 222 -2 474 224 56 0 chr20 68071459 68071566 -4082316 - L2 LINE L2 -1 3271 3159 1504 269 44 20 chr20 68072043 68072493 -4081389 + MLT1J LTR MaLR 36 496 -15 204 67 0 0 chr20 68074004 68074034 -4079848 + (TTCA)n Simple_repeat Simple_repeat 1 30 0 198 265 0 0 chr20 68074089 68074138 -4079744 + L2 LINE L2 2325 2373 -941 397 223 59 87 chr20 68074142 68074458 -4079424 + MLT1F LTR MaLR 3 351 -216 183 156 0 0 chr20 68074469 68074501 -4079381 + CT-rich Low_complexity Low_complexity 3 34 0 585 175 35 12 chr20 68074532 68074703 -4079179 + (TCTA)n Simple_repeat Simple_repeat 4 178 0 206 225 0 0 chr20 68074709 68074749 -4079133 + (TCTG)n Simple_repeat Simple_repeat 1 40 0 768 184 4 17 chr20 68074750 68075281 -4078601 + (TCTA)n Simple_repeat Simple_repeat 1 523 0 370 229 145 15 chr20 68075281 68075486 -4078396 - MLT1C LTR MaLR -186 281 46 180 238 24 83 chr20 68075521 68075605 -4078277 + L2 LINE L2 3189 3267 -5 461 174 46 179 chr20 68075619 68075676 -4078206 - MER5A DNA MER1_type 0 189 126 838 165 0 0 chr20 68075676 68075809 -4078073 + FLAM_C SINE Alu 1 133 0 461 174 46 179 chr20 68075809 68075969 -4077913 - MER5A DNA MER1_type -63 126 1 4179 188 27 15 chr20 68076568 68077868 -4076014 - L1MB8 LINE L1 -6 6172 4858 3034 242 61 30 chr20 68077891 68078825 -4075057 - L1ME1 LINE L1 -5 6161 5202 1891 201 24 117 chr20 68078826 68079367 -4074515 - MLT1F LTR MaLR -2 540 50 268 286 136 29 chr20 68079667 68079807 -4074075 - L2 LINE L2 0 3313 3159 196 268 89 8 chr20 68079866 68079989 -4073893 - MIR SINE MIR -71 191 58 181 182 0 0 chr20 68080675 68080708 -4073174 + MIR SINE MIR 109 141 -67 180 262 0 0 chr20 68080734 68080776 -4073106 + L2 LINE L2 3191 3232 -81 964 200 0 0 chr20 68080913 68081093 -4072789 - MER53 DNA DNA 0 189 10 292 308 0 0 chr20 68081117 68081224 -4072658 - MER5A DNA MER1_type -75 114 8 250 283 104 19 chr20 68081373 68081479 -4072403 + MIR SINE MIR 15 129 -133 324 208 13 13 chr20 68083122 68083199 -4070683 + MER116 DNA Mariner 1 77 -3 215 337 70 0 chr20 68083283 68083369 -4070513 - MIR SINE MIR -140 122 31 272 315 212 36 chr20 68083737 68084128 -4069754 - L2 LINE L2 -3 3310 2851 379 300 67 6 chr20 68085203 68085368 -4068514 + MIR SINE MIR 32 208 -54 519 250 28 7 chr20 68085421 68085565 -4068317 + MER106B DNA MER1_type 902 1048 -11 983 271 8 4 chr20 68085658 68085905 -4067977 + MIR SINE MIR 15 262 0 557 266 96 52 chr20 68086427 68086866 -4067016 + L2 LINE L2 2855 3312 -1 211 178 48 0 chr20 68087466 68087520 -4066362 + MIR SINE MIR 92 140 -68 296 306 134 29 chr20 68087768 68087977 -4065905 - MIR SINE MIR -1 261 31 367 76 0 45 chr20 68087982 68088048 -4065834 + (TCCC)n Simple_repeat Simple_repeat 3 65 0 2024 154 0 0 chr20 68088898 68089209 -4064673 + AluJb SINE Alu 1 311 -1 229 347 11 0 chr20 68090669 68090764 -4063118 - MIR SINE MIR -128 134 39 547 293 17 17 chr20 68090794 68090968 -4062914 + MIR SINE MIR 65 238 -24 269 351 121 6 chr20 68092354 68092528 -4061354 - MIR SINE MIR -20 242 49 3364 202 43 18 chr20 68092534 68093276 -4060606 - L1MB8 LINE L1 -1 6177 5417 201 74 0 0 chr20 68094553 68094580 -4059302 + (T)n Simple_repeat Simple_repeat 1 27 0 336 302 153 47 chr20 68095428 68095703 -4058179 - L2 LINE L2 -5 3308 3005 614 232 21 41 chr20 68095745 68095939 -4057943 - MIR SINE MIR -13 249 60 486 169 0 0 chr20 68096501 68096590 -4057292 + (CA)n Simple_repeat Simple_repeat 2 90 0 212 315 167 45 chr20 68096811 68097033 -4056849 + L2 LINE L2 3024 3272 0 1112 235 132 36 chr20 68097137 68097554 -4056328 + MLT1C LTR MaLR 11 467 0 1218 283 125 21 chr20 68097805 68098317 -4055565 + MLT1K LTR MaLR 10 574 -14 267 322 87 27 chr20 68098832 68098981 -4054901 - MIR SINE MIR -90 172 15 280 198 12 12 chr20 68098981 68099067 -4054815 + GA-rich Low_complexity Low_complexity 1 86 0 367 259 0 42 chr20 68099070 68099432 -4054450 + (TG)n Simple_repeat Simple_repeat 1 346 0 453 261 0 48 chr20 68099457 68099645 -4054237 + (TG)n Simple_repeat Simple_repeat 1 179 0 224 275 11 33 chr20 68099668 68099759 -4054123 + (TG)n Simple_repeat Simple_repeat 1 89 0 183 194 0 75 chr20 68100354 68100421 -4053461 - L2 LINE L2 -92 3221 3160 227 366 174 0 chr20 68100447 68100619 -4053263 + L2 LINE L2 3107 3308 -5 277 288 117 6 chr20 68100657 68100820 -4053062 - L2 LINE L2 -309 3004 2824 313 255 104 0 chr20 68101696 68101802 -4052080 + L2 LINE L2 3137 3253 -19 186 107 0 0 chr20 68101827 68101855 -4052027 - MIR SINE MIR -118 144 117 478 231 161 0 chr20 68101891 68102021 -4051861 - MER96 DNA MER1_type? -22 153 3 183 218 13 26 chr20 68102688 68102766 -4051116 + CT-rich Low_complexity Low_complexity 1 77 0 208 350 31 0 chr20 68103271 68103368 -4050514 + MIR SINE MIR 47 146 -116 204 323 69 46 chr20 68103566 68103696 -4050186 - MIR SINE MIR -5 257 125 328 281 149 0 chr20 68104770 68104884 -4048998 - MIR SINE MIR -118 144 14 182 313 0 0 chr20 68106497 68106545 -4047337 - L2 LINE L2 -16 3297 3250 308 260 102 8 chr20 68107088 68107215 -4046667 - L2 LINE L2 -610 2704 2566 889 215 142 41 chr20 68108182 68108521 -4045361 + MLT1C LTR MaLR 19 391 -76 413 283 65 16 chr20 68109052 68109236 -4044646 - L2 LINE L2 -248 3065 2873 239 327 0 29 chr20 68109560 68109664 -4044218 + 7SK RNA RNA 1 101 -92 228 338 0 0 chr20 68109736 68109816 -4044066 + MER117 DNA MER1_type 117 196 -1 462 240 269 0 chr20 68111132 68111303 -4042579 + MER20 DNA MER1_type 3 219 0 692 187 0 22 chr20 68111706 68111888 -4041994 + GA-rich Low_complexity Low_complexity 3 180 0 223 129 0 0 chr20 68111896 68111927 -4041955 + (GGGA)n Simple_repeat Simple_repeat 3 33 0 819 159 6 28 chr20 68111935 68112117 -4041765 + GA-rich Low_complexity Low_complexity 3 180 0 339 238 82 41 chr20 68112543 68112690 -4041192 + L2 LINE L2 2909 3061 -252 284 273 34 0 chr20 68112714 68112802 -4041080 + L2 LINE L2 3210 3300 -13 285 269 143 10 chr20 68112936 68113071 -4040811 + MIR SINE MIR 10 159 -49 191 283 0 0 chr20 68114062 68114108 -4039774 - L2 LINE L2 -1 3312 3267 511 294 60 28 chr20 68114229 68114447 -4039435 + MLT1K LTR MaLR 47 271 -317 379 276 0 35 chr20 68114892 68115008 -4038874 + MIR SINE MIR 33 144 -64 653 313 126 30 chr20 68115639 68116114 -4037768 + L2 LINE L2 2763 3282 -31 1845 243 117 31 chr20 68116117 68116725 -4037157 - MLT2F LTR ERVL -3 660 1 675 284 22 26 chr20 68117128 68117396 -4036486 - L1MC4a LINE L1 -1866 5942 5676 346 308 173 45 chr20 68117396 68117662 -4036220 + L2 LINE L2 2965 3264 -8 2214 110 0 0 chr20 68117717 68118025 -4035857 - AluSx SINE Alu -2 310 3 224 334 87 69 chr20 68118108 68118443 -4035439 + L2 LINE L2 2921 3261 -11 2004 94 76 0 chr20 68118919 68119196 -4034686 + AluSx SINE Alu 3 300 -12 999 289 86 48 chr20 68120321 68120445 -4033437 + MLT1K LTR MaLR 100 218 -370 1728 163 3 24 chr20 68120445 68120571 -4033311 + AluJb SINE Alu 13 140 -172 1524 179 96 0 chr20 68120571 68120851 -4033031 + AluJo SINE Alu 1 307 -5 1728 163 3 24 chr20 68120851 68121019 -4032863 + AluJb SINE Alu 140 301 -11 999 289 86 48 chr20 68121019 68121357 -4032525 + MLT1K LTR MaLR 218 580 -8 189 246 0 0 chr20 68121989 68122046 -4031836 - L2 LINE L2 -406 2908 2852 250 337 175 0 chr20 68122695 68122861 -4031021 - L2 LINE L2 -559 2755 2561 197 313 61 10 chr20 68124775 68124874 -4029008 - MIR SINE MIR -3 259 156 217 304 80 24 chr20 68125010 68125135 -4028747 - L2 LINE L2 0 3272 3141 23 33 0 0 chr20 68126339 68126369 -4027513 + GC_rich Low_complexity Low_complexity 1 30 0 212 184 0 0 chr20 68126568 68126606 -4027276 + T-rich Low_complexity Low_complexity 1 38 0 185 86 57 0 chr20 68128035 68128070 -4025812 + (TCTG)n Simple_repeat Simple_repeat 4 40 0 198 0 0 0 chr20 68128467 68128489 -4025393 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 253 238 16 0 chr20 68128819 68128882 -4025000 + MIR3 SINE MIR 105 168 -40 521 271 188 34 chr20 68130510 68130835 -4023047 + L1MC5 LINE L1 7567 7941 -20 196 271 51 17 chr20 68131333 68131392 -4022490 - L3 LINE CR1 0 1577 1517 413 343 25 18 chr20 68131866 68132045 -4021837 + MIR3 SINE MIR 2 184 -24 789 277 23 10 chr20 68132645 68132901 -4020981 - MIR SINE MIR 0 262 5 277 324 20 10 chr20 68133770 68133872 -4020010 + MIR SINE MIR 43 145 -63 327 350 56 0 chr20 68136359 68136556 -4017326 + L1MC4a LINE L1 5710 5917 -1891 234 0 0 0 chr20 68136561 68136587 -4017295 + (T)n Simple_repeat Simple_repeat 1 26 0 1983 102 3 53 chr20 68138347 68138669 -4015213 - AluSx SINE Alu -1 311 6 23 54 0 0 chr20 68139465 68139502 -4014380 + AT_rich Low_complexity Low_complexity 1 37 0 1975 130 0 13 chr20 68139517 68139825 -4014057 - AluSx SINE Alu -8 304 1 188 373 13 0 chr20 68142168 68142243 -4011639 - L2 LINE L2 0 3272 3197 370 277 0 20 chr20 68143077 68143178 -4010704 - MIR3 SINE MIR -6 202 104 1756 164 0 3 chr20 68143561 68143859 -4010023 - AluJo SINE Alu -15 297 1 815 328 129 2 chr20 68143888 68144376 -4009506 - L1MC4a LINE L1 -1897 5911 5362 3055 249 56 22 chr20 68145618 68146617 -4007265 - HAL1 LINE L1 0 2507 1475 319 225 122 14 chr20 68146612 68146834 -4007048 - HAL1 LINE L1 -1349 1158 913 * 1256 183 0 9 chr20 68146835 68147048 -4006834 - MER46A DNA MER2_type -25 211 1 638 283 53 73 chr20 68147137 68147536 -4006346 - HAL1 LINE L1 -2115 392 2 267 265 0 0 chr20 68147557 68147606 -4006276 + L2 LINE L2 3211 3259 -13 1971 126 7 0 chr20 68147792 68148086 -4005796 - AluY SINE Alu -12 299 4 228 35 0 0 chr20 68148086 68148115 -4005767 + (T)n Simple_repeat Simple_repeat 1 29 0 197 324 73 0 chr20 68148184 68148252 -4005630 - MIR3 SINE MIR -18 190 118 617 226 35 60 chr20 68148617 68148816 -4005066 - L2 LINE L2 0 3313 3120 604 273 166 40 chr20 68150295 68150820 -4003062 - L2 LINE L2 -3 3310 2717 217 286 26 0 chr20 68152319 68152396 -4001486 + MER5C DNA MER1_type 40 118 -206 205 260 212 74 chr20 68153515 68153949 -3999933 + L2 LINE L2 2820 3313 0 217 284 94 8 chr20 68154129 68154256 -3999626 - MIR SINE MIR -65 143 6 323 287 61 67 chr20 68154363 68154412 -3999470 + L1ME LINE L1 5566 5614 -507 2107 124 0 0 chr20 68154412 68154710 -3999172 + AluSx SINE Alu 1 298 -14 1971 150 0 0 chr20 68154712 68155018 -3998864 + AluSg SINE Alu 1 306 -4 323 287 61 67 chr20 68155018 68155129 -3998753 + L1ME LINE L1 5615 5728 -393 218 98 73 0 chr20 68157399 68157440 -3996442 + (TCCA)n Simple_repeat Simple_repeat 3 46 0 463 231 8 54 chr20 68157512 68157642 -3996240 + Charlie4 DNA MER1_type 72 195 -1766 625 205 30 30 chr20 68157711 68157877 -3996005 + Charlie4 DNA MER1_type 1784 1949 -12 209 235 24 47 chr20 68158119 68158204 -3995678 + MER5A DNA MER1_type 12 94 -95 1075 221 0 0 chr20 68159991 68160190 -3993692 - MER58A DNA MER1_type 0 224 26 1965 139 0 0 chr20 68160417 68160705 -3993177 - AluSx SINE Alu -11 301 14 757 255 126 0 chr20 68160763 68161034 -3992848 - MER113 DNA MER1_type? -89 432 128 552 228 124 36 chr20 68161925 68162175 -3991707 + L2 LINE L2 2910 3181 -132 351 347 40 29 chr20 68164132 68164305 -3989577 - MIR SINE MIR -58 204 30 343 277 10 0 chr20 68166087 68166188 -3987694 - MIR SINE MIR -76 186 85 1284 205 14 20 chr20 68166237 68166272 -3987610 - L1MB5 LINE L1 -12 6159 6125 2069 102 0 3 chr20 68166272 68166583 -3987299 + AluSx SINE Alu 1 310 0 1284 205 14 20 chr20 68166583 68166863 -3987019 - L1MB5 LINE L1 -46 6125 5868 36 62 0 0 chr20 68167323 68167387 -3986495 + AT_rich Low_complexity Low_complexity 1 64 0 1395 167 139 86 chr20 68167519 68167949 -3985933 - MLT1C LTR MaLR -14 453 1 2238 93 0 3 chr20 68168037 68168339 -3985543 - AluSc SINE Alu -8 301 1 289 296 19 46 chr20 68168340 68168448 -3985434 - L2 LINE L2 -14 3299 3195 5166 206 22 30 chr20 68168896 68169638 -3984244 - L1MC4a LINE L1 0 7808 7077 913 137 0 0 chr20 68169638 68169769 -3984113 - FLAM_C SINE Alu -1 132 2 5166 206 22 30 chr20 68169769 68170207 -3983675 - L1MC4a LINE L1 -731 7077 6637 366 149 11 32 chr20 68170212 68170306 -3983576 + CT-rich Low_complexity Low_complexity 4 95 0 412 254 64 0 chr20 68170316 68170426 -3983456 + L2 LINE L2 3186 3302 -11 303 236 14 0 chr20 68170424 68170496 -3983386 + MIR SINE MIR 189 261 -1 * 1093 203 84 42 chr20 68170955 68171241 -3982641 - MER33 DNA MER1_type -22 302 5 22 35 0 0 chr20 68171444 68171473 -3982409 + AT_rich Low_complexity Low_complexity 1 29 0 281 341 29 46 chr20 68174516 68174689 -3979193 - MIR SINE MIR -46 216 47 200 182 0 0 chr20 68174749 68174782 -3979100 - MIR SINE MIR -9 253 221 427 178 44 0 chr20 68175853 68175943 -3977939 - MER53 DNA DNA 0 189 96 333 245 106 0 chr20 68176218 68176312 -3977570 + L2 LINE L2 3210 3313 0 575 292 131 19 chr20 68176842 68176994 -3976888 - L1ME4a LINE L1 -223 5898 5765 225 0 0 0 chr20 68176994 68177019 -3976863 + (CA)n Simple_repeat Simple_repeat 2 26 0 575 292 131 19 chr20 68177019 68177239 -3976643 - L1ME4a LINE L1 -356 5765 5484 485 317 38 11 chr20 68177396 68177579 -3976303 + L2 LINE L2 2542 2729 -585 1274 266 63 59 chr20 68177788 68178481 -3975401 + L1ME3A LINE L1 647 1342 -4863 313 261 17 17 chr20 68178517 68178636 -3975246 + L1ME3A LINE L1 1567 1685 -4711 1796 76 0 0 chr20 68178705 68178928 -3974954 - AluSg/x SINE Alu -5 305 83 22 0 0 0 chr20 68179252 68179274 -3974608 + AT_rich Low_complexity Low_complexity 1 22 0 562 291 78 4 chr20 68179346 68179614 -3974268 + L1ME3A LINE L1 2217 2504 -3711 296 310 19 13 chr20 68179621 68179776 -3974106 + L1ME3A LINE L1 2542 2697 -3518 266 233 17 0 chr20 68179793 68179853 -3974029 + (TG)n Simple_repeat Simple_repeat 2 62 0 1423 206 31 19 chr20 68179867 68180209 -3973673 + Tigger7 DNA MER2_type 1 2491 0 1096 281 56 18 chr20 68180232 68180836 -3973046 + L1ME3A LINE L1 2714 3340 -2875 223 24 24 49 chr20 68181056 68181097 -3972785 + (CAAA)n Simple_repeat Simple_repeat 1 40 0 834 147 0 14 chr20 68181105 68181248 -3972634 + FLAM_C SINE Alu 1 141 -2 2228 97 6 6 chr20 68181252 68181563 -3972319 + AluSq SINE Alu 1 311 -2 268 239 30 0 chr20 68181565 68181632 -3972250 + L1ME3A LINE L1 3643 3711 -2504 1807 198 63 14 chr20 68181646 68182135 -3971747 - MER69 DNA AcHobo -4 2522 2010 1253 256 90 61 chr20 68182137 68182648 -3971234 - MER69 DNA AcHobo -1962 564 39 1827 283 96 39 chr20 68182771 68184122 -3969760 + L1ME3A LINE L1 3846 5273 -942 354 319 72 19 chr20 68184154 68184461 -3969421 + L1ME3A LINE L1 5328 5650 -581 246 290 43 0 chr20 68184498 68184567 -3969315 + MER112 DNA MER1_type 1 72 -188 238 265 17 0 chr20 68184610 68184727 -3969155 + (CA)n Simple_repeat Simple_repeat 2 120 0 393 269 17 13 chr20 68184739 68185044 -3968838 + (CA)n Simple_repeat Simple_repeat 1 306 0 440 255 70 19 chr20 68185046 68185203 -3968679 + MER112 DNA MER1_type 70 234 -26 628 312 25 21 chr20 68185223 68185508 -3968374 + L1ME3A LINE L1 5735 6020 -219 2444 159 23 34 chr20 68185669 68186108 -3967774 - Tigger2a DNA MER2_type 0 434 1 1822 151 22 26 chr20 68186111 68186489 -3967393 - AluJo SINE Alu 0 377 1 333 314 119 13 chr20 68186604 68186830 -3967052 + L2 LINE L2 2819 3068 -245 894 215 6 11 chr20 68187061 68187238 -3966644 - MER45A DNA AcHobo -1 177 2 236 283 179 9 chr20 68187408 68187514 -3966368 + MIR SINE MIR 13 136 -126 1487 170 3 103 chr20 68189240 68189628 -3964254 - MLT1B LTR MaLR -34 356 8 266 200 130 43 chr20 68190961 68191076 -3962806 - MLT1J LTR MaLR -151 360 236 306 175 75 50 chr20 68191104 68191184 -3962698 - MLT1J LTR MaLR -369 142 61 196 245 0 38 chr20 68191769 68191822 -3962060 - L2 LINE L2 0 3313 3263 316 207 37 12 chr20 68192308 68192390 -3961492 + L2 LINE L2 3184 3267 -5 1897 164 5 55 chr20 68193080 68193483 -3960399 + MLT1B LTR MaLR 8 390 0 641 309 46 54 chr20 68193767 68193939 -3959943 + L2 LINE L2 2967 3139 -174 2066 118 7 0 chr20 68193939 68194251 -3959631 - AluSx SINE Alu 0 314 1 641 309 46 54 chr20 68194251 68194427 -3959455 + L2 LINE L2 3139 3313 0 239 193 18 18 chr20 68195627 68195684 -3958198 - LTR67 LTR ERVL -17 540 484 297 305 125 8 chr20 68196324 68196452 -3957430 + MIR SINE MIR 117 259 -3 229 202 164 19 chr20 68196894 68196998 -3956884 - L1ME4a LINE L1 -46 6075 5957 877 160 0 0 chr20 68197084 68197215 -3956667 - AluJb SINE Alu -181 131 1 244 279 123 0 chr20 68197232 68197354 -3956528 - L1ME4a LINE L1 -247 5874 5738 1757 217 95 21 chr20 68197523 68197956 -3955926 + MLT1C LTR MaLR 3 467 0 361 328 177 10 chr20 68198287 68198479 -3955403 - MIR SINE MIR -11 251 28 2432 121 8 30 chr20 68198847 68199219 -3954663 + THE1B LTR MaLR 1 364 0 182 139 47 0 chr20 68199313 68199356 -3954526 + CT-rich Low_complexity Low_complexity 4 48 0 195 173 0 0 chr20 68199358 68199410 -3954472 + (CA)n Simple_repeat Simple_repeat 1 52 0 356 316 106 23 chr20 68199621 68199980 -3953902 + L1MC/D LINE L1 5268 5652 -533 189 245 41 0 chr20 68199997 68200046 -3953836 - L2 LINE L2 -285 2987 2937 570 277 15 50 chr20 68200548 68200750 -3953132 - L2 LINE L2 -21 3292 3098 498 203 0 0 chr20 68200751 68200869 -3953013 + (TG)n Simple_repeat Simple_repeat 1 118 0 480 226 147 17 chr20 68200904 68201081 -3952801 - L2 LINE L2 -259 3054 2855 444 229 85 17 chr20 68201258 68201376 -3952506 + MIR SINE MIR 56 181 -81 184 197 115 16 chr20 68201363 68201424 -3952458 - L2 LINE L2 -1307 2007 1941 * 306 239 0 15 chr20 68201622 68201689 -3952193 - L3 LINE CR1 -103 1474 1409 * 443 317 126 43 chr20 68201679 68202160 -3951722 + L2 LINE L2 2718 3264 -8 2137 107 31 0 chr20 68202192 68202482 -3951400 - AluSx SINE Alu -13 299 1 223 194 0 0 chr20 68202526 68202562 -3951320 - MIR SINE MIR -107 155 120 274 363 34 39 chr20 68202883 68203087 -3950795 - MIR SINE MIR -36 226 24 1096 188 23 23 chr20 68204194 68204412 -3949470 + MER20 DNA MER1_type 1 218 -1 342 346 11 39 chr20 68205571 68205750 -3948132 - MIR SINE MIR -76 186 13 285 234 32 20 chr20 68207666 68207869 -3946013 + GA-rich Low_complexity Low_complexity 1 205 0 259 130 65 0 chr20 68207918 68207995 -3945887 + GA-rich Low_complexity Low_complexity 1 82 0 2314 106 0 0 chr20 68208623 68208924 -3944958 + AluSq SINE Alu 1 301 -12 401 283 77 38 chr20 68209200 68209427 -3944455 - MIR SINE MIR -8 254 19 1498 139 0 0 chr20 68209573 68209782 -3944100 + AluJb SINE Alu 85 293 -19 286 327 0 19 chr20 68209898 68210002 -3943880 - MIR3 SINE MIR -25 183 82 193 160 10 0 chr20 68210940 68210983 -3942899 - MIR SINE MIR -61 147 103 275 242 15 0 chr20 68211010 68211076 -3942806 + L2 LINE L2 3206 3272 0 272 257 158 7 chr20 68211164 68211316 -3942566 + MER96 DNA MER1_type? 1 175 0 180 259 52 0 chr20 68211320 68211378 -3942504 + MIR SINE MIR 110 170 -92 189 304 58 0 chr20 68211461 68211530 -3942352 - MIR SINE MIR -170 92 20 208 283 50 0 chr20 68211713 68211773 -3942109 + L2 LINE L2 3210 3272 0 648 237 0 0 chr20 68211779 68211952 -3941930 + (TGGG)n Simple_repeat Simple_repeat 2 174 0 803 193 9 0 chr20 68211959 68212193 -3941689 + (TGGA)n Simple_repeat Simple_repeat 1 236 0 256 325 125 19 chr20 68212804 68212964 -3940918 + MIR SINE MIR 50 226 -36 320 298 46 0 chr20 68214125 68214256 -3939626 - L1ME4a LINE L1 -1 6120 5984 195 42 0 0 chr20 68214467 68214491 -3939391 + (TTTTG)n Simple_repeat Simple_repeat 1 24 0 190 289 60 12 chr20 68216767 68216850 -3937032 + MIR SINE MIR 170 256 -6 707 255 16 40 chr20 68217655 68217906 -3935976 - MER113 DNA MER1_type? -119 402 158 3674 209 45 34 chr20 68217917 68218880 -3935002 - L1ME1 LINE L1 -2 6444 5493 2919 80 0 11 chr20 68218880 68219256 -3934626 - THE1C LTR MaLR -3 372 1 3674 209 45 34 chr20 68219256 68219724 -3934158 - L1ME1 LINE L1 -953 5493 5032 1729 169 3 24 chr20 68219724 68220019 -3933863 + AluJo SINE Alu 1 289 -23 897 116 0 0 chr20 68220024 68220170 -3933712 + (TA)n Simple_repeat Simple_repeat 1 146 0 3674 209 45 34 chr20 68220170 68220273 -3933609 - L1ME1 LINE L1 -1417 5029 4895 809 203 0 0 chr20 68220290 68220428 -3933454 - AluJb SINE Alu -38 274 137 1201 235 67 5 chr20 68220431 68220818 -3933064 - L1ME1 LINE L1 -1534 4892 4482 612 262 16 16 chr20 68220818 68221062 -3932820 - L1ME1 LINE L1 -5263 1163 920 2148 233 101 43 chr20 68221068 68221845 -3932037 - L1MEc LINE L1 -1949 4992 4139 2215 90 22 0 chr20 68221845 68222122 -3931760 + AluSx SINE Alu 11 293 -19 2148 233 101 43 chr20 68222122 68222372 -3931510 - L1MEc LINE L1 -2802 4139 3905 379 271 40 51 chr20 68222365 68222638 -3931244 - L1MEc LINE L1 -4258 2864 2595 * 893 189 111 26 chr20 68222676 68222866 -3931016 - MER58A DNA MER1_type -1 223 18 703 234 101 3 chr20 68222866 68223173 -3930709 - L1MEc LINE L1 -4792 2149 1813 414 233 250 0 chr20 68223184 68223300 -3930582 - L1MCc LINE L1 -3366 3575 3431 1906 259 54 19 chr20 68223301 68224223 -3929659 - L1MCc LINE L1 -4892 1531 868 739 285 79 29 chr20 68224468 68224885 -3928997 - L1MCc LINE L1 -5956 467 30 300 239 200 48 chr20 68225008 68225183 -3928699 + MIR SINE MIR 51 249 -13 280 319 14 50 chr20 68225605 68225746 -3928136 + MIR SINE MIR 81 216 -46 530 322 82 13 chr20 68226437 68226568 -3927314 + MIR SINE MIR 14 135 -127 1440 211 46 46 chr20 68226568 68226962 -3926920 - MLT2C1 LTR ERVL -3 394 1 530 322 82 13 chr20 68226962 68227063 -3926819 + MIR SINE MIR 135 262 0 188 309 0 0 chr20 68227099 68227141 -3926741 + MIR SINE MIR 221 262 0 222 239 0 0 chr20 68227238 68227330 -3926552 + (CA)n Simple_repeat Simple_repeat 1 92 0 2260 100 28 0 chr20 68227598 68227888 -3925994 - AluSx SINE Alu -14 298 1 424 291 35 0 chr20 68228281 68228422 -3925460 + L2 LINE L2 2556 2701 -613 1590 174 10 29 chr20 68228478 68228640 -3925242 + L1PB4 LINE L1 5846 6001 -155 2561 108 14 3 chr20 68228640 68229000 -3924882 - THE1B LTR MaLR 0 364 1 1590 174 10 29 chr20 68229000 68229147 -3924735 + L1PB4 LINE L1 6001 6149 -7 1824 239 80 40 chr20 68229172 68229989 -3923893 - L1ME3A LINE L1 -86 6084 5236 274 196 115 38 chr20 68230203 68230359 -3923523 + MIR SINE MIR 2 237 -25 263 290 0 14 chr20 68230453 68230522 -3923360 + L2 LINE L2 2981 3048 -224 778 288 66 36 chr20 68230522 68230914 -3922968 - MLT1I LTR MaLR 0 409 6 224 313 60 37 chr20 68230968 68231102 -3922780 + L2 LINE L2 3113 3249 -64 274 125 54 0 chr20 68231239 68231295 -3922587 - L1MC5 LINE L1 -94 7867 7809 1013 244 159 35 chr20 68231317 68231895 -3921987 - L1MC5 LINE L1 -50 7911 7262 2050 106 33 0 chr20 68232289 68232592 -3921290 - L1PA10 LINE L1 -2 6166 5854 206 234 0 0 chr20 68232899 68232946 -3920936 + CT-rich Low_complexity Low_complexity 1 47 0 254 248 77 43 chr20 68233075 68233192 -3920690 + MIR SINE MIR 50 170 -92 1335 101 11 0 chr20 68233359 68233537 -3920345 + AluSc SINE Alu 112 291 -18 303 217 72 0 chr20 68233548 68233617 -3920265 - L1ME LINE L1 -479 5691 5618 181 345 235 16 chr20 68233876 68234259 -3919623 + L2 LINE L2 1809 2275 -1039 710 293 182 34 chr20 68234559 68235229 -3918653 + L2 LINE L2 2547 3313 0 580 218 67 30 chr20 68235259 68235424 -3918458 + MIR SINE MIR 8 178 -84 2344 122 0 0 chr20 68235827 68236131 -3917751 - AluSx SINE Alu -8 304 1 895 238 104 0 chr20 68236848 68237050 -3916832 + MER58A DNA MER1_type 2 224 0 633 263 97 41 chr20 68237764 68238178 -3915704 - L1MC5 LINE L1 -48 7913 7477 2487 68 0 0 chr20 68238860 68239156 -3914726 + AluY SINE Alu 1 296 -15 336 242 81 0 chr20 68239186 68239285 -3914597 + MIR SINE MIR 66 172 -90 320 256 88 24 chr20 68239401 68239526 -3914356 - MIR SINE MIR -72 190 58 330 222 107 20 chr20 68239964 68240232 -3913650 + MLT1H LTR MaLR 212 595 0 640 294 52 24 chr20 68240457 68240709 -3913173 - MIR SINE MIR 0 262 4 1900 85 88 0 chr20 68240751 68241038 -3912844 - AluSg SINE Alu 0 310 1 2576 59 0 0 chr20 68241083 68241386 -3912496 + AluY SINE Alu 1 303 -8 184 285 109 58 chr20 68241579 68241716 -3912166 + L2 LINE L2 3119 3262 -10 333 240 0 97 chr20 68242581 68242777 -3911105 + G-rich Low_complexity Low_complexity 3 179 0 28 48 0 0 chr20 68242787 68242829 -3911053 + GC_rich Low_complexity Low_complexity 1 42 0 23 0 0 0 chr20 68243093 68243116 -3910766 + GC_rich Low_complexity Low_complexity 1 23 0 2140 121 3 0 chr20 68245118 68245407 -3908475 - AluSq SINE Alu -23 290 1 1037 183 46 6 chr20 68245448 68245623 -3908259 - AluJb SINE Alu -49 263 82 2560 61 3 10 chr20 68245629 68245942 -3907940 - AluY SINE Alu 0 311 1 254 292 52 31 chr20 68246851 68246907 -3906975 - L2 LINE L2 -18 3295 3235 874 221 67 0 chr20 68246907 68247115 -3906767 + MER58A DNA MER1_type 1 222 -2 254 292 52 31 chr20 68247115 68247154 -3906728 - L2 LINE L2 -78 3235 3198 2046 130 0 49 chr20 68247193 68247517 -3906365 - AluSx SINE Alu -4 308 1 2414 98 0 0 chr20 68247711 68248017 -3905865 + AluSx SINE Alu 1 306 -6 196 273 45 64 chr20 68249154 68249264 -3904618 + L2 LINE L2 2898 3005 -267 454 230 89 85 chr20 68250179 68250256 -3903626 + MIR SINE MIR 25 100 -162 2314 102 0 0 chr20 68250256 68250549 -3903333 - AluSq SINE Alu -20 293 1 454 230 89 85 chr20 68250549 68250706 -3903176 + MIR SINE MIR 100 260 -2 2546 38 41 0 chr20 68250706 68250998 -3902884 - AluY SINE Alu -7 304 1 1521 166 33 46 chr20 68251003 68251310 -3902572 - AluJo SINE Alu -1 311 9 413 261 81 87 chr20 68251359 68251533 -3902349 - HAL1 LINE L1 -2 2505 2332 908 127 122 127 chr20 68251533 68251770 -3902112 + MER46A DNA MER2_type 1 236 0 413 261 81 87 chr20 68251770 68251928 -3901954 - HAL1 LINE L1 -175 2332 2175 546 289 61 15 chr20 68251954 68252151 -3901731 + MIR SINE MIR 36 241 -21 1469 241 45 0 chr20 68252487 68252868 -3901014 - L1MDa LINE L1 -1261 4819 4422 2526 219 71 77 chr20 68252876 68253929 -3899953 - L1MDa LINE L1 -2091 3989 2931 2076 122 0 17 chr20 68253929 68254062 -3899820 + AluSx SINE Alu 4 138 -174 2391 88 0 3 chr20 68254062 68254367 -3899515 + AluSc SINE Alu 1 304 -5 2076 122 0 17 chr20 68254367 68254528 -3899354 + AluSx SINE Alu 138 293 -19 2526 219 71 77 chr20 68254528 68254971 -3898911 - L1MDa LINE L1 -3149 2931 2354 1553 191 14 4 chr20 68254971 68255249 -3898633 - AluJb SINE Alu -30 282 2 2526 219 71 77 chr20 68255249 68255511 -3898371 - L1MDa LINE L1 -3726 2354 2092 253 157 20 0 chr20 68255546 68255597 -3898285 - Charlie5 DNA MER1_type -2518 94 43 300 241 12 0 chr20 68255624 68255707 -3898175 - L1MDa LINE L1 -4122 2139 2056 688 257 109 4 chr20 68255708 68255973 -3897909 - L1MDa LINE L1 -4261 2000 1708 1332 269 96 68 chr20 68255973 68256788 -3897094 - L1ME LINE L1 -1340 4740 3866 673 213 0 22 chr20 68256788 68256924 -3896958 - FLAM_A SINE Alu 0 133 1 1332 269 96 68 chr20 68256924 68257530 -3896352 - L1ME LINE L1 -2214 3866 3279 1290 288 61 30 chr20 68257559 68257739 -3896143 - L1ME LINE L1 -2949 3131 2958 2537 66 0 0 chr20 68257739 68258041 -3895841 + AluSc SINE Alu 1 302 -7 2459 64 0 10 chr20 68258047 68258344 -3895538 + AluSc SINE Alu 2 295 -14 2302 101 0 0 chr20 68258349 68258646 -3895236 + AluSg SINE Alu 1 297 -13 1290 288 61 30 chr20 68258646 68259259 -3894623 - L1ME LINE L1 -3129 2951 2300 333 217 9 19 chr20 68259263 68259369 -3894513 - L1ME LINE L1 -3833 2247 2143 * 1454 203 60 76 chr20 68259364 68259877 -3894005 - L1ME2 LINE L1 -68 6096 5592 1164 201 104 44 chr20 68259882 68260177 -3893705 - L1ME2 LINE L1 -1889 4257 3932 638 178 119 0 chr20 68260177 68260295 -3893587 + FLAM_C SINE Alu 1 132 -1 1164 201 104 44 chr20 68260295 68260382 -3893500 - L1ME2 LINE L1 -2214 3932 3852 2093 202 133 4 chr20 68260390 68260856 -3893026 - MLT1F1 LTR MaLR -13 554 29 1295 257 148 14 chr20 68260905 68261346 -3892536 + L1MC4 LINE L1 7476 7991 -51 1831 155 21 7 chr20 68261346 68261630 -3892252 - AluJo SINE Alu -24 288 1 1295 257 148 14 chr20 68261630 68261682 -3892200 + L1MC4 LINE L1 7991 8035 -7 1097 271 74 59 chr20 68262024 68262209 -3891673 - L1ME LINE L1 -4578 1683 1502 2346 95 0 0 chr20 68262209 68262505 -3891377 - AluY SINE Alu -15 296 1 1097 271 74 59 chr20 68262505 68263033 -3890849 - L1ME LINE L1 -4759 1502 893 1545 206 32 41 chr20 68263033 68263377 -3890505 - MER2 DNA MER2_type -2 342 2 1097 271 74 59 chr20 68263377 68263760 -3890122 - L1ME LINE L1 -5368 893 517 312 309 57 106 chr20 68263918 68264183 -3889699 - L1ME LINE L1 -5543 527 276 513 294 128 49 chr20 68264199 68264590 -3889292 + L2 LINE L2 2832 3253 -60 298 266 119 14 chr20 68265270 68265413 -3888469 + L1MCc LINE L1 -520 4294966933 -6227 806 260 63 72 chr20 68265692 68266149 -3887733 + L1MCc LINE L1 1269 1729 -4655 2043 118 4 4 chr20 68266149 68266429 -3887453 + AluSx SINE Alu 1 280 -32 306 0 0 0 chr20 68266429 68266463 -3887419 + (TAAA)n Simple_repeat Simple_repeat 4 37 0 806 260 63 72 chr20 68266463 68266628 -3887254 + L1MCc LINE L1 1727 1738 -4646 569 221 48 76 chr20 68266671 68266920 -3886962 + L1MCc LINE L1 2049 2290 -4273 1254 228 0 12 chr20 68266925 68267180 -3886702 + AluJo SINE Alu 1 252 -60 21 0 0 0 chr20 68267180 68267201 -3886681 + AT_rich Low_complexity Low_complexity 1 21 0 2216 103 0 13 chr20 68267201 68267502 -3886380 + AluSq SINE Alu 1 297 -16 339 256 25 13 chr20 68267698 68267798 -3886084 + L1ME3 LINE L1 5985 6086 -80 463 191 77 71 chr20 68267815 68267983 -3885899 - L1M4 LINE L1 -1916 4230 4062 * 465 214 71 0 chr20 68267980 68268092 -3885790 + L1ME2 LINE L1 5462 5581 -583 1107 204 113 0 chr20 68268093 68268368 -3885514 + L1ME2 LINE L1 5668 5973 -191 277 254 9 45 chr20 68268419 68268529 -3885353 + L1MC/D LINE L1 5607 5712 -2096 2219 91 0 7 chr20 68269144 68269464 -3884418 - AluSx SINE Alu 0 318 1 1251 226 52 12 chr20 68270220 68270659 -3883223 - MLT1D LTR MaLR 0 505 15 276 266 208 47 chr20 68270861 68271053 -3882829 + MIR SINE MIR 6 228 -34 2280 110 7 0 chr20 68271170 68271478 -3882404 - AluSq SINE Alu -3 310 1 207 297 92 67 chr20 68273786 68274069 -3879813 - L2 LINE L2 -84 3229 2940 187 264 19 0 chr20 68275353 68275406 -3878476 - L2 LINE L2 -5 3267 3214 470 359 40 11 chr20 68279160 68279533 -3874349 + L2 LINE L2 2433 2816 -498 511 288 100 55 chr20 68279575 68279954 -3873928 + L2 LINE L2 2918 3313 0 237 161 0 54 chr20 68280028 68280084 -3873798 + L2 LINE L2 3169 3221 -92 2408 85 0 0 chr20 68281097 68281390 -3872492 + AluSx SINE Alu 1 293 -19 1030 207 10 30 chr20 68281768 68281850 -3872032 + MER58A DNA MER1_type 26 108 -2312 1376 109 95 0 chr20 68281850 68282060 -3871822 + MER30 DNA MER1_type 1 230 0 1030 207 10 30 chr20 68282060 68282180 -3871702 + MER58A DNA MER1_type 108 224 0 520 268 141 42 chr20 68282303 68282616 -3871266 + L1ME LINE L1 350 693 -5679 1804 278 120 33 chr20 68282922 68283132 -3870750 + L1ME LINE L1 818 1008 -5555 744 203 0 0 chr20 68283132 68283265 -3870617 + FLAM_C SINE Alu 1 133 0 1804 278 120 33 chr20 68283265 68284212 -3869670 + L1ME LINE L1 1008 1872 -4691 1933 150 14 0 chr20 68284212 68284506 -3869376 + AluSx SINE Alu 3 300 -12 1804 278 120 33 chr20 68284506 68284684 -3869198 + L1ME LINE L1 1872 2033 -4530 2351 70 3 0 chr20 68284684 68284968 -3868914 + AluSp SINE Alu 1 285 -28 1804 278 120 33 chr20 68284968 68285187 -3868695 + L1ME LINE L1 2033 2623 -3940 251 304 87 7 chr20 68285207 68285345 -3868537 + L1ME1 LINE L1 5987 6135 -31 538 305 171 3 chr20 68287932 68288224 -3865658 - L2 LINE L2 0 3313 2973 262 297 199 14 chr20 68288364 68288650 -3865232 - MER102b DNA MER1_type -1 340 2 1554 187 7 30 chr20 68288692 68288992 -3864890 + AluJo SINE Alu 3 295 -17 2307 97 3 3 chr20 68289181 68289479 -3864403 + AluSq SINE Alu 1 298 -15 1057 273 118 67 chr20 68289671 68290741 -3863141 - L1ME3 LINE L1 -7 6155 5029 317 329 84 42 chr20 68291060 68291203 -3862679 - L2 LINE L2 -1 3271 3123 373 273 9 28 chr20 68291391 68291497 -3862385 + L1MC4a LINE L1 5509 5609 -633 748 257 76 42 chr20 68291572 68291765 -3862117 + L1MC4a LINE L1 5616 5824 -1984 2125 137 0 3 chr20 68291765 68292065 -3861817 + AluSx SINE Alu 1 299 -13 748 257 76 42 chr20 68292065 68292159 -3861723 + L1MC4a LINE L1 5824 5913 -1895 1145 202 65 0 chr20 68292399 68292647 -3861235 + L1MD3 LINE L1 7729 7992 -3 2350 103 7 0 chr20 68297877 68298187 -3855695 - AluSx SINE Alu 0 312 1 2346 69 0 10 chr20 68298812 68299100 -3854782 - AluSg SINE Alu -10 300 16 1327 166 34 27 chr20 68299482 68299777 -3854105 + L1MA4 LINE L1 6004 6300 0 308 296 21 36 chr20 68301222 68301386 -3852496 + MIR SINE MIR 18 176 -58 1143 246 102 47 chr20 68301538 68302002 -3851880 - L1ME3A LINE L1 0 6170 5733 207 0 0 0 chr20 68302002 68302025 -3851857 + (CA)n Simple_repeat Simple_repeat 2 24 0 1143 246 102 47 chr20 68302025 68302083 -3851799 - L1ME3A LINE L1 -437 5733 5680 2130 125 0 0 chr20 68302083 68302371 -3851511 + AluSq SINE Alu 1 288 -25 1143 246 102 47 chr20 68302371 68302470 -3851412 - L1ME3A LINE L1 -490 5680 5469 2263 65 16 59 chr20 68302616 68302922 -3850960 - AluY SINE Alu -18 293 1 2510 68 3 10 chr20 68303355 68303665 -3850217 + AluSq SINE Alu 1 308 -5 2524 69 0 3 chr20 68304899 68305205 -3848677 - AluY SINE Alu -6 305 1 2233 118 7 0 chr20 68306637 68306943 -3846939 + AluSx SINE Alu 1 308 -4 262 289 18 26 chr20 68307221 68307335 -3846547 - MIR SINE MIR -41 221 109 467 97 72 236 chr20 68307336 68307531 -3846351 + MER90 LTR ERV1 2 164 -411 412 246 129 31 chr20 68307551 68307775 -3846107 + MER90 LTR ERV1 369 614 0 183 262 0 95 chr20 68307778 68307862 -3846020 - MIR SINE MIR -166 96 21 642 196 6 27 chr20 68308160 68308396 -3845486 + CT-rich Low_complexity Low_complexity 1 243 -218 180 0 0 0 chr20 68308396 68308416 -3845466 + (TA)n Simple_repeat Simple_repeat 2 21 0 642 196 6 27 chr20 68308416 68308631 -3845251 + CT-rich Low_complexity Low_complexity 243 461 0 215 200 0 0 chr20 68308636 68308676 -3845206 + C-rich Low_complexity Low_complexity 4 43 0 293 143 0 0 chr20 68309587 68309636 -3844246 - L2 LINE L2 -1 3271 3223 2000 123 0 7 chr20 68309979 68310290 -3843592 - AluJo SINE Alu 0 319 11 300 91 0 0 chr20 68310373 68310417 -3843465 + (TTCA)n Simple_repeat Simple_repeat 1 44 0 205 287 111 19 chr20 68310427 68310535 -3843347 - L2 LINE L2 -18 3254 3137 506 210 80 25 chr20 68310662 68310824 -3843058 + MIR SINE MIR 86 256 -6 856 209 37 11 chr20 68310867 68311054 -3842828 + AluJo SINE Alu 118 309 -3 1528 163 8 4 chr20 68311068 68311325 -3842557 + MLT1D LTR MaLR 248 505 0 206 122 0 20 chr20 68311726 68311775 -3842107 + (TAAA)n Simple_repeat Simple_repeat 2 49 0 3097 160 133 121 chr20 68312100 68312656 -3841226 - L1MC3 LINE L1 -17 7768 7220 347 256 11 0 chr20 68312656 68312746 -3841136 - MLT1F1 LTR MaLR -442 125 35 3097 160 133 121 chr20 68312746 68312870 -3841012 - L1MC3 LINE L1 -565 7220 7099 896 159 0 0 chr20 68312870 68313002 -3840880 - FLAM_C SINE Alu -1 132 1 3097 160 133 121 chr20 68313002 68313281 -3840601 - L1MC3 LINE L1 -686 7099 6706 312 291 152 83 chr20 68313318 68313922 -3839960 + L1MEd LINE L1 3 648 -5471 621 292 41 65 chr20 68313922 68314362 -3839520 + MLT1G1 LTR MaLR 1 391 -199 1095 233 97 126 chr20 68314391 68314753 -3839129 + MER77 LTR ERV1 58 400 -205 2526 111 19 6 chr20 68314753 68315112 -3838770 - THE1B LTR MaLR 0 364 1 1095 233 97 126 chr20 68315112 68315306 -3838576 + MER77 LTR ERV1 400 598 -7 372 189 77 63 chr20 68315390 68315533 -3838349 + MLT1G1 LTR MaLR 395 539 -28 262 232 256 12 chr20 68315542 68315706 -3838176 + L1MEd LINE L1 647 850 -5269 1069 234 170 8 chr20 68315719 68316312 -3837570 + LTR50 LTR ERVL 7 793 -2 297 203 17 0 chr20 68316318 68316377 -3837505 + HERV16 LTR ERVL 2 61 -4935 586 235 92 0 chr20 68316432 68316551 -3837331 - MER63A DNA MER1_type -4 206 77 1038 175 6 6 chr20 68316554 68316731 -3837151 + FRAM SINE Alu 1 168 -8 2247 114 0 3 chr20 68317120 68317419 -3836463 - AluSq SINE Alu -15 298 1 834 232 55 48 chr20 68317598 68317701 -3836181 + ERVL LTR ERVL 3906 4007 -1757 2381 81 0 7 chr20 68317701 68317998 -3835884 + AluSg SINE Alu 1 295 -15 834 232 55 48 chr20 68317998 68318269 -3835613 + ERVL LTR ERVL 4007 4315 -1449 1848 175 0 7 chr20 68318314 68318623 -3835259 + AluJb SINE Alu 1 307 -5 423 216 113 16 chr20 68318649 68318834 -3835048 + L1MEd LINE L1 895 1097 -5022 544 243 147 50 chr20 68318851 68319069 -3834813 + MER112 DNA MER1_type 15 253 -7 1746 158 19 48 chr20 68319132 68319443 -3834439 - AluJb SINE Alu -6 306 5 1737 191 26 3 chr20 68319465 68319815 -3834067 + L1MB3 LINE L1 5824 6181 -2 306 286 135 57 chr20 68319834 68319940 -3833942 + L1MEd LINE L1 1172 1268 -5042 2303 103 3 0 chr20 68319940 68320240 -3833642 + AluSx SINE Alu 1 301 -11 306 286 135 57 chr20 68320240 68320443 -3833439 + L1MEd LINE L1 1268 1454 -4856 1826 169 23 0 chr20 68320443 68320745 -3833137 + AluJb SINE Alu 1 309 -3 306 286 135 57 chr20 68320745 68321361 -3832521 + L1MEd LINE L1 1454 2214 -4096 306 242 43 8 chr20 68321363 68321483 -3832399 - L1MD3 LINE L1 0 8042 7914 26 0 0 0 chr20 68321906 68321932 -3831950 + AT_rich Low_complexity Low_complexity 1 26 0 297 118 0 0 chr20 68322336 68322387 -3831495 + (CGTG)n Simple_repeat Simple_repeat 4 54 0 22 35 0 0 chr20 68322783 68322812 -3831070 + GC_rich Low_complexity Low_complexity 1 29 0 262 288 254 3 chr20 68322985 68323273 -3830609 + L2 LINE L2 2945 3304 -9 343 286 88 14 chr20 68323612 68323759 -3830123 - L2 LINE L2 -38 3275 3118 198 258 197 0 chr20 68323807 68323873 -3830009 + L2 LINE L2 3194 3272 0 315 241 181 0 chr20 68323920 68324003 -3829879 - MIR SINE MIR -159 103 6 231 211 0 39 chr20 68324332 68324384 -3829498 - L2 LINE L2 0 3272 3223 367 261 26 26 chr20 68324536 68324651 -3829231 - L2 LINE L2 -231 3041 2927 2074 92 18 18 chr20 68324690 68324972 -3828910 - AluSx SINE Alu -17 295 14 1871 149 21 3 chr20 68326194 68326483 -3827399 - AluJo SINE Alu -18 294 1 2250 82 4 0 chr20 68326865 68327184 -3826698 - AluSp SINE Alu 0 320 1 2483 71 3 0 chr20 68328305 68328601 -3825281 - AluSc SINE Alu -12 297 1 2475 76 3 0 chr20 68330390 68330692 -3823190 + AluSp SINE Alu 1 303 -10 1365 202 112 6 chr20 68331143 68331474 -3822408 - MER47A DNA MER2_type 0 366 1 186 281 35 0 chr20 68331602 68331659 -3822223 - L2 LINE L2 -9 3263 3205 215 256 128 23 chr20 68331838 68331924 -3821958 - MIR SINE MIR -24 238 144 2318 109 3 0 chr20 68332171 68332483 -3821399 + AluSq SINE Alu 1 313 0 1883 125 27 10 chr20 68332590 68332885 -3820997 + AluSx SINE Alu 2 301 -11 230 263 25 25 chr20 68333354 68333434 -3820448 + MIR3 SINE MIR 108 187 -21 26 0 0 0 chr20 68334288 68334314 -3819568 + AT_rich Low_complexity Low_complexity 1 26 0 214 363 82 11 chr20 68335121 68335303 -3818579 + L2 LINE L2 2593 2787 -527 189 157 100 71 chr20 68335735 68335805 -3818077 + L2 LINE L2 3177 3248 -24 1854 182 0 0 chr20 68335876 68336172 -3817710 + AluSx SINE Alu 2 297 -15 278 331 127 57 chr20 68336745 68337484 -3816398 + L2 LINE L2 2091 2881 -433 315 275 244 8 chr20 68337698 68337845 -3816037 + MIR SINE MIR 33 219 -43 221 281 24 0 chr20 68337897 68337962 -3815920 - MER5A DNA MER1_type -48 130 67 662 252 119 51 chr20 68338056 68338605 -3815277 - L2 LINE L2 -18 3295 2727 1900 109 88 0 chr20 68338605 68338888 -3814994 - AluSg SINE Alu -2 308 1 1477 101 5 19 chr20 68338895 68339103 -3814779 - AluSg/x SINE Alu -4 308 104 628 215 105 38 chr20 68339161 68339370 -3814512 - L2 LINE L2 -864 2450 2228 229 253 143 11 chr20 68341966 68342057 -3811825 - L2 LINE L2 -4 3268 3166 475 274 18 24 chr20 68342255 68342419 -3811463 - L2 LINE L2 0 3313 3151 22 0 0 0 chr20 68342496 68342518 -3811364 + AT_rich Low_complexity Low_complexity 1 22 0 282 56 0 0 chr20 68343052 68343088 -3810794 + (CA)n Simple_repeat Simple_repeat 1 36 0 5340 165 63 39 chr20 68343199 68343560 -3810322 - L1MC1 LINE L1 0 6333 5982 225 0 0 0 chr20 68343560 68343585 -3810297 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 1805 140 3 28 chr20 68343590 68343876 -3810006 - AluSx SINE Alu -33 279 1 5340 165 63 39 chr20 68343876 68344432 -3809450 - L1MC1 LINE L1 -354 5979 5438 2133 110 34 0 chr20 68344432 68344724 -3809158 - AluSx SINE Alu -10 302 1 5340 165 63 39 chr20 68344724 68344811 -3809071 - L1MC1 LINE L1 -895 5438 5355 2230 76 0 17 chr20 68344811 68345131 -3808751 - AluY SINE Alu 0 315 1 5340 165 63 39 chr20 68345131 68345386 -3808496 - L1MC1 LINE L1 -978 5355 5024 2116 137 10 0 chr20 68345450 68345743 -3808139 + AluSx SINE Alu 1 296 -16 7065 61 9 40 chr20 68346294 68347282 -3806600 - SVA Other Other 0 1386 430 4412 85 32 72 chr20 68347295 68348259 -3805623 - SVA Other Other -518 868 154 193 286 124 29 chr20 68350019 68350124 -3803758 - L2 LINE L2 -16 3297 3183 269 300 130 20 chr20 68350754 68350954 -3802928 - L3 LINE CR1 -564 1013 792 412 303 132 22 chr20 68350965 68351193 -3802689 + MIR SINE MIR 2 254 -8 266 0 0 29 chr20 68351626 68351661 -3802221 + (CACCC)n Simple_repeat Simple_repeat 5 38 0 325 318 184 5 chr20 68352606 68352807 -3801075 - MIR SINE MIR -6 256 20 2424 66 10 0 chr20 68353148 68353436 -3800446 - AluSx SINE Alu -20 292 2 195 341 74 7 chr20 68353568 68353703 -3800179 - MIR SINE MIR -117 145 2 237 355 36 18 chr20 68354279 68354389 -3799493 + MIR SINE MIR 61 172 -90 206 231 15 0 chr20 68354835 68354900 -3798982 + GA-rich Low_complexity Low_complexity 2 67 0 2479 80 3 3 chr20 68356282 68356595 -3797287 + AluSp SINE Alu 1 313 0 701 265 6 11 chr20 68358827 68359008 -3794874 + MER5A DNA MER1_type 5 184 -5 27 0 0 0 chr20 68359025 68359052 -3794830 + AT_rich Low_complexity Low_complexity 1 27 0 2030 132 7 10 chr20 68359052 68359348 -3794534 - AluSx SINE Alu -17 295 1 869 177 7 0 chr20 68359375 68359516 -3794366 - FRAM SINE Alu -36 140 1 351 120 0 0 chr20 68361599 68361649 -3792233 - Charlie1 DNA MER1_type -1 2760 2711 838 152 0 0 chr20 68361658 68361783 -3792099 + FLAM_A SINE Alu 1 125 -8 3251 174 90 32 chr20 68363021 68363080 -3790802 - Charlie1 DNA MER1_type -1 2760 2706 807 163 8 0 chr20 68363080 68363209 -3790673 + FLAM_A SINE Alu 1 130 -3 3251 174 90 32 chr20 68363209 68363379 -3790503 - Charlie1 DNA MER1_type -55 2706 2547 1658 129 24 87 chr20 68363379 68363712 -3790170 - AluSx SINE Alu 0 312 1 3251 174 90 32 chr20 68363712 68363723 -3790159 - Charlie1 DNA MER1_type -214 2547 2538 2381 92 0 3 chr20 68363723 68364028 -3789854 - AluSx SINE Alu -8 304 1 3251 174 90 32 chr20 68364028 68364607 -3789275 - Charlie1 DNA MER1_type -223 2538 1891 1633 144 60 27 chr20 68364711 68365010 -3788872 - AluJo SINE Alu -2 310 2 292 336 19 0 chr20 68366382 68366489 -3787393 + MIR SINE MIR 32 140 -68 366 279 70 60 chr20 68366713 68366914 -3786968 + MIR SINE MIR 43 245 -17 218 149 15 149 chr20 68367487 68367554 -3786328 + MIR SINE MIR 16 73 -135 191 278 150 23 chr20 68369059 68369192 -3784690 + MIR SINE MIR 4 153 -109 23 0 0 0 chr20 68369339 68369362 -3784520 + AT_rich Low_complexity Low_complexity 1 23 0 1989 141 27 0 chr20 68369480 68369778 -3784104 - AluJb SINE Alu -6 306 1 506 254 141 44 chr20 68369785 68370104 -3783778 - L1MC4 LINE L1 0 8042 7693 1498 149 131 4 chr20 68370150 68370418 -3783464 - AluJb SINE Alu 0 302 1 1077 205 115 63 chr20 68370438 68370785 -3783097 - L1MC4 LINE L1 -478 7564 7200 374 279 63 6 chr20 68370864 68371022 -3782860 - L1ME4a LINE L1 -237 5884 5718 1723 173 3 7 chr20 68371436 68371731 -3782151 - AluJo SINE Alu -18 294 1 1018 181 48 43 chr20 68372638 68372848 -3781034 - MER20 DNA MER1_type -1 218 8 222 351 67 0 chr20 68373274 68373408 -3780474 + MIR3 SINE MIR 18 160 -48 2272 93 0 7 chr20 68374512 68374813 -3779069 + AluSg SINE Alu 1 299 -11 279 224 201 45 chr20 68375787 68375921 -3777961 - L2 LINE L2 -11 3261 3107 189 0 0 0 chr20 68376551 68376572 -3777310 + (T)n Simple_repeat Simple_repeat 1 21 0 1019 123 0 14 chr20 68376592 68376738 -3777144 - AluSq/x SINE Alu -167 146 3 202 308 39 0 chr20 68377050 68377128 -3776754 + MIR3 SINE MIR 86 166 -42 200 176 0 0 chr20 68377526 68377560 -3776322 + (CA)n Simple_repeat Simple_repeat 1 34 0 22 35 0 0 chr20 68378742 68378771 -3775111 + AT_rich Low_complexity Low_complexity 1 29 0 333 0 0 0 chr20 68378837 68378874 -3775008 + (TG)n Simple_repeat Simple_repeat 2 38 0 300 200 40 67 chr20 68379599 68379674 -3774208 - MER58A DNA MER1_type -16 91 19 198 167 0 0 chr20 68380803 68380839 -3773043 + (TG)n Simple_repeat Simple_repeat 1 36 0 581 230 36 30 chr20 68382511 68382676 -3771206 + MIR SINE MIR 80 245 -17 326 123 18 0 chr20 68382834 68382891 -3770991 + CT-rich Low_complexity Low_complexity 2 59 0 757 155 24 6 chr20 68382903 68383071 -3770811 + CT-rich Low_complexity Low_complexity 1 171 0 712 291 137 13 chr20 68383071 68383589 -3770293 - L2 LINE L2 -1 3312 2736 253 218 0 0 chr20 68384252 68384307 -3769575 + MER103 DNA DNA 30 84 -82 447 285 109 69 chr20 68384340 68384772 -3769110 + LTR16C LTR ERVL 43 491 0 338 245 21 0 chr20 68384794 68384888 -3768994 + MER103 DNA DNA 26 121 -45 182 273 34 80 chr20 68385049 68385137 -3768745 - MIR SINE MIR -165 97 14 262 194 276 51 chr20 68386099 68386197 -3767685 + L2 LINE L2 3186 3305 -8 466 112 80 23 chr20 68386198 68386611 -3767271 + (TCTA)n Simple_repeat Simple_repeat 1 389 -435 2289 96 0 0 chr20 68386611 68386924 -3766958 + AluSx SINE Alu 1 313 0 466 112 80 23 chr20 68386924 68386978 -3766904 + (TCTA)n Simple_repeat Simple_repeat 389 824 0 796 327 15 12 chr20 68386987 68387311 -3766571 - L1ME4a LINE L1 -187 5934 5610 390 268 8 41 chr20 68387769 68387892 -3765990 + MIR SINE MIR 5 123 -139 238 375 31 8 chr20 68388088 68388216 -3765666 + L2 LINE L2 3142 3272 0 568 38 12 12 chr20 68388407 68388487 -3765395 + (GA)n Simple_repeat Simple_repeat 2 81 0 231 88 0 0 chr20 68389007 68389041 -3764841 + (TGAA)n Simple_repeat Simple_repeat 2 35 0 205 337 168 10 chr20 68389100 68389296 -3764586 + MIR SINE MIR 18 244 -18 315 178 41 14 chr20 68389657 68389730 -3764152 - MIR SINE MIR -71 191 117 1713 224 135 0 chr20 68389948 68390391 -3763491 + MLT1D LTR MaLR 3 505 0 342 257 28 37 chr20 68391038 68391147 -3762735 + MIR3 SINE MIR 10 117 -91 227 265 176 0 chr20 68391220 68391288 -3762594 + L2 LINE L2 3191 3270 -2 281 148 23 34 chr20 68391689 68391777 -3762105 + (TGGA)n Simple_repeat Simple_repeat 3 89 0 555 185 9 9 chr20 68391957 68392065 -3761817 + MER103 DNA DNA 14 121 -45 2056 124 3 13 chr20 68392890 68393205 -3760677 + AluSx SINE Alu 1 312 0 1121 211 38 0 chr20 68393497 68393710 -3760172 + MER58A DNA MER1_type 2 222 -2 473 224 56 0 chr20 68393813 68393920 -3759962 - L2 LINE L2 -1 3271 3159 1542 269 44 20 chr20 68394397 68394847 -3759035 + MLT1J LTR MaLR 36 496 -15 204 67 0 0 chr20 68396358 68396388 -3757494 + (TTCA)n Simple_repeat Simple_repeat 1 30 0 190 311 0 0 chr20 68396431 68396492 -3757390 + L2 LINE L2 2313 2373 -941 432 223 59 87 chr20 68396496 68396812 -3757070 + MLT1F LTR MaLR 3 351 -216 183 156 0 0 chr20 68396823 68396855 -3757027 + CT-rich Low_complexity Low_complexity 3 34 0 585 175 35 12 chr20 68396886 68397057 -3756825 + (TCTA)n Simple_repeat Simple_repeat 4 178 0 206 225 0 0 chr20 68397063 68397103 -3756779 + (TCTG)n Simple_repeat Simple_repeat 1 40 0 768 184 4 17 chr20 68397104 68397635 -3756247 + (TCTA)n Simple_repeat Simple_repeat 1 523 0 400 235 145 15 chr20 68397635 68397840 -3756042 - MLT1C LTR MaLR -186 281 46 194 262 12 71 chr20 68397875 68397959 -3755923 + L2 LINE L2 3189 3267 -5 479 174 46 179 chr20 68397973 68398030 -3755852 - MER5A DNA MER1_type 0 189 126 893 165 0 0 chr20 68398030 68398163 -3755719 + FLAM_C SINE Alu 1 133 0 479 174 46 179 chr20 68398163 68398323 -3755559 - MER5A DNA MER1_type -63 126 1 4168 191 25 13 chr20 68398922 68400222 -3753660 - L1MB8 LINE L1 -6 6172 4858 3078 241 61 30 chr20 68400245 68401179 -3752703 - L1ME1 LINE L1 -5 6161 5202 1933 217 22 114 chr20 68401180 68401766 -3752116 - MLT1F LTR MaLR -2 540 9 274 286 136 29 chr20 68402021 68402161 -3751721 - L2 LINE L2 0 3313 3159 198 268 89 8 chr20 68402220 68402343 -3751539 - MIR SINE MIR -71 191 58 183 182 0 0 chr20 68403029 68403062 -3750820 + MIR SINE MIR 109 141 -67 184 262 0 0 chr20 68403088 68403130 -3750752 + L2 LINE L2 3191 3232 -81 965 200 0 0 chr20 68403267 68403447 -3750435 - MER53 DNA DNA 0 189 10 315 308 0 0 chr20 68403471 68403578 -3750304 - MER5A DNA MER1_type -75 114 8 282 351 110 11 chr20 68403727 68403918 -3749964 + MIR SINE MIR 15 224 -38 368 208 13 13 chr20 68405476 68405553 -3748329 + MER116 DNA Mariner 1 77 -3 215 337 70 0 chr20 68405637 68405723 -3748159 - MIR SINE MIR -140 122 31 272 315 212 36 chr20 68406091 68406482 -3747400 - L2 LINE L2 -3 3310 2851 379 300 67 6 chr20 68407557 68407722 -3746160 + MIR SINE MIR 32 208 -54 519 250 28 7 chr20 68407775 68407919 -3745963 + MER106B DNA MER1_type 902 1048 -11 983 271 8 4 chr20 68408012 68408259 -3745623 + MIR SINE MIR 15 262 0 557 266 96 52 chr20 68408781 68409220 -3744662 + L2 LINE L2 2855 3312 -1 211 178 48 0 chr20 68409820 68409874 -3744008 + MIR SINE MIR 92 140 -68 296 306 134 29 chr20 68410122 68410331 -3743551 - MIR SINE MIR -1 261 31 367 76 0 45 chr20 68410336 68410402 -3743480 + (TCCC)n Simple_repeat Simple_repeat 3 65 0 2024 154 0 0 chr20 68411252 68411563 -3742319 + AluJb SINE Alu 1 311 -1 229 347 11 0 chr20 68413023 68413118 -3740764 - MIR SINE MIR -128 134 39 547 293 17 17 chr20 68413148 68413322 -3740560 + MIR SINE MIR 65 238 -24 269 351 121 6 chr20 68414708 68414882 -3739000 - MIR SINE MIR -20 242 49 3364 202 43 18 chr20 68414888 68415630 -3738252 - L1MB8 LINE L1 -1 6177 5417 201 74 0 0 chr20 68416907 68416934 -3736948 + (T)n Simple_repeat Simple_repeat 1 27 0 336 302 153 47 chr20 68417782 68418057 -3735825 - L2 LINE L2 -5 3308 3005 614 232 21 41 chr20 68418099 68418293 -3735589 - MIR SINE MIR -13 249 60 486 169 0 0 chr20 68418855 68418944 -3734938 + (CA)n Simple_repeat Simple_repeat 2 90 0 203 320 167 45 chr20 68419165 68419387 -3734495 + L2 LINE L2 3024 3272 0 1112 235 132 36 chr20 68419491 68419908 -3733974 + MLT1C LTR MaLR 11 467 0 1218 283 125 21 chr20 68420159 68420671 -3733211 + MLT1K LTR MaLR 10 574 -14 267 322 87 27 chr20 68421186 68421335 -3732547 - MIR SINE MIR -90 172 15 280 198 12 12 chr20 68421335 68421421 -3732461 + GA-rich Low_complexity Low_complexity 1 86 0 367 259 0 42 chr20 68421424 68421786 -3732096 + (TG)n Simple_repeat Simple_repeat 1 346 0 453 261 0 48 chr20 68421811 68421999 -3731883 + (TG)n Simple_repeat Simple_repeat 1 179 0 224 275 11 33 chr20 68422022 68422113 -3731769 + (TG)n Simple_repeat Simple_repeat 1 89 0 183 194 0 75 chr20 68422708 68422775 -3731107 - L2 LINE L2 -92 3221 3160 227 366 174 0 chr20 68422801 68422973 -3730909 + L2 LINE L2 3107 3308 -5 277 288 117 6 chr20 68423011 68423174 -3730708 - L2 LINE L2 -309 3004 2824 313 255 104 0 chr20 68424050 68424156 -3729726 + L2 LINE L2 3137 3253 -19 186 107 0 0 chr20 68424181 68424209 -3729673 - MIR SINE MIR -118 144 117 478 231 161 0 chr20 68424245 68424375 -3729507 - MER96 DNA MER1_type? -22 153 3 183 218 13 26 chr20 68425042 68425120 -3728762 + CT-rich Low_complexity Low_complexity 1 77 0 208 350 31 0 chr20 68425625 68425722 -3728160 + MIR SINE MIR 47 146 -116 204 323 69 46 chr20 68425920 68426050 -3727832 - MIR SINE MIR -5 257 125 328 281 149 0 chr20 68427124 68427238 -3726644 - MIR SINE MIR -118 144 14 182 313 0 0 chr20 68428850 68428898 -3724984 - L2 LINE L2 -16 3297 3250 308 260 102 8 chr20 68429441 68429568 -3724314 - L2 LINE L2 -610 2704 2566 889 215 142 41 chr20 68430535 68430874 -3723008 + MLT1C LTR MaLR 19 391 -76 413 283 65 16 chr20 68431405 68431589 -3722293 - L2 LINE L2 -248 3065 2873 239 327 0 29 chr20 68431913 68432017 -3721865 + 7SK RNA RNA 1 101 -92 462 240 269 0 chr20 68433485 68433656 -3720226 + MER20 DNA MER1_type 3 219 0 729 191 0 16 chr20 68434061 68434244 -3719638 + GA-rich Low_complexity Low_complexity 1 180 0 223 129 0 0 chr20 68434252 68434283 -3719599 + (GGGA)n Simple_repeat Simple_repeat 3 33 0 819 159 6 28 chr20 68434291 68434473 -3719409 + GA-rich Low_complexity Low_complexity 3 180 0 339 238 82 41 chr20 68434899 68435046 -3718836 + L2 LINE L2 2909 3061 -252 284 273 34 0 chr20 68435070 68435158 -3718724 + L2 LINE L2 3210 3300 -13 285 266 144 9 chr20 68435298 68435427 -3718455 + MIR SINE MIR 13 159 -49 191 283 0 0 chr20 68436418 68436464 -3717418 - L2 LINE L2 -1 3312 3267 511 294 60 28 chr20 68436585 68436803 -3717079 + MLT1K LTR MaLR 47 271 -317 379 276 0 35 chr20 68437248 68437364 -3716518 + MIR SINE MIR 33 144 -64 653 313 126 30 chr20 68437995 68438470 -3715412 + L2 LINE L2 2763 3282 -31 1845 243 117 31 chr20 68438473 68439081 -3714801 - MLT2F LTR ERVL -3 660 1 699 287 22 26 chr20 68439484 68439752 -3714130 - L1MC4a LINE L1 -1866 5942 5676 387 297 177 49 chr20 68439752 68440018 -3713864 + L2 LINE L2 2965 3264 -8 2209 102 0 0 chr20 68440073 68440382 -3713500 - AluSx SINE Alu -6 306 3 253 334 87 69 chr20 68440465 68440800 -3713082 + L2 LINE L2 2921 3261 -11 1988 94 76 0 chr20 68441276 68441553 -3712329 + AluSx SINE Alu 3 300 -12 999 274 91 52 chr20 68442626 68442750 -3711132 + MLT1K LTR MaLR 100 218 -370 1696 163 3 24 chr20 68442750 68442876 -3711006 + AluJb SINE Alu 13 140 -172 1494 179 96 0 chr20 68442876 68443156 -3710726 + AluJo SINE Alu 1 307 -5 1696 163 3 24 chr20 68443156 68443324 -3710558 + AluJb SINE Alu 140 301 -11 999 274 91 52 chr20 68443324 68443662 -3710220 + MLT1K LTR MaLR 218 580 -8 192 246 0 0 chr20 68444294 68444351 -3709531 - L2 LINE L2 -406 2908 2852 246 301 187 12 chr20 68445000 68445166 -3708716 - L2 LINE L2 -559 2755 2561 193 309 91 55 chr20 68445163 68445273 -3708609 + L2 LINE L2 3196 3309 -4 * 213 313 61 10 chr20 68447080 68447179 -3706703 - MIR SINE MIR -3 259 156 242 271 78 54 chr20 68447311 68447440 -3706442 - L2 LINE L2 0 3272 3141 23 33 0 0 chr20 68448644 68448674 -3705208 + GC_rich Low_complexity Low_complexity 1 30 0 203 189 0 0 chr20 68448873 68448910 -3704972 + T-rich Low_complexity Low_complexity 1 37 0 185 86 57 0 chr20 68450340 68450375 -3703507 + (TCTG)n Simple_repeat Simple_repeat 4 40 0 198 0 0 0 chr20 68450773 68450795 -3703087 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 266 238 16 0 chr20 68451125 68451188 -3702694 + MIR3 SINE MIR 105 168 -40 478 249 206 52 chr20 68452814 68453139 -3700743 + L1MC5 LINE L1 7567 7941 -20 207 271 51 17 chr20 68453637 68453696 -3700186 - L3 LINE CR1 0 1577 1517 432 330 26 19 chr20 68454170 68454341 -3699541 + MIR3 SINE MIR 2 176 -32 807 277 23 10 chr20 68454949 68455205 -3698677 - MIR SINE MIR 0 262 5 304 294 29 20 chr20 68456074 68456176 -3697706 + MIR SINE MIR 43 145 -63 327 350 56 0 chr20 68458663 68458860 -3695022 + L1MC4a LINE L1 5710 5917 -1891 261 0 0 0 chr20 68458865 68458894 -3694988 + (T)n Simple_repeat Simple_repeat 1 29 0 1970 106 3 53 chr20 68460654 68460976 -3692906 - AluSx SINE Alu -1 311 6 23 54 0 0 chr20 68461772 68461809 -3692073 + AT_rich Low_complexity Low_complexity 1 37 0 1975 130 0 13 chr20 68461824 68462132 -3691750 - AluSx SINE Alu -8 304 1 596 261 68 11 chr20 68463598 68463774 -3690108 + MIR SINE MIR 28 213 -49 2221 98 0 0 chr20 68464578 68464883 -3688999 - AluSq SINE Alu -8 305 1 39 22 0 0 chr20 68466651 68466697 -3687185 + AT_rich Low_complexity Low_complexity 1 46 0 469 246 65 43 chr20 68466802 68466940 -3686942 + MIR SINE MIR 52 192 -70 1339 153 44 13 chr20 68466973 68467202 -3686680 + MER46A DNA MER2_type 1 236 0 390 21 0 0 chr20 68469581 68469628 -3684254 + (TG)n Simple_repeat Simple_repeat 2 48 0 33 43 0 0 chr20 68469628 68469675 -3684207 + AT_rich Low_complexity Low_complexity 1 47 0 481 239 65 43 chr20 68469780 68469918 -3683964 + MIR SINE MIR 52 192 -70 489 128 93 35 chr20 68469951 68470037 -3683845 + MER46A DNA MER2_type 1 91 -145 1829 113 34 121 chr20 68470045 68470205 -3683677 + MER46B DNA MER2_type 8 4294967288 -2739 2081 97 10 7 chr20 68470205 68470493 -3683389 + AluSq SINE Alu 1 289 -24 1829 113 34 121 chr20 68470493 68470720 -3683162 + MER46B DNA MER2_type -9 236 0 21 0 0 0 chr20 68474707 68474728 -3679154 + AT_rich Low_complexity Low_complexity 1 21 0 2177 59 38 0 chr20 68476525 68476812 -3677070 + AluSg SINE Alu 1 298 -12 248 310 184 13 chr20 68478325 68478483 -3675399 + MARNA DNA Mariner 180 364 -222 2215 95 3 0 chr20 68479295 68479589 -3674293 + AluSx SINE Alu 1 295 -17 2278 75 3 0 chr20 68479589 68479882 -3674000 + AluY SINE Alu 1 295 -16 249 57 0 0 chr20 68480552 68480587 -3673295 + (TG)n Simple_repeat Simple_repeat 2 36 0 316 240 178 31 chr20 68480677 68480806 -3673076 - MIR3 SINE MIR -55 153 6 2206 65 54 0 chr20 68481768 68482062 -3671820 + AluY SINE Alu 1 310 -1 740 192 0 0 chr20 68482078 68482203 -3671679 + AluJo/FLAM SINE Alu 1 125 -177 1161 82 0 0 chr20 68482205 68482351 -3671531 - AluSq/x SINE Alu -167 146 1 225 208 9 179 chr20 68482819 68482872 -3671010 - MIR3 SINE MIR -14 194 166 2089 125 10 0 chr20 68482872 68483175 -3670707 - AluSx SINE Alu -6 306 1 225 208 9 179 chr20 68483175 68483227 -3670655 - MIR3 SINE MIR -42 166 107 250 231 160 103 chr20 68483346 68483696 -3670186 + L1MC4a LINE L1 5881 6250 -1558 1626 246 186 69 chr20 68483855 68484328 -3669554 + L1MC4 LINE L1 6476 6892 -916 600 221 156 0 chr20 68484328 68484482 -3669400 + MER45A DNA AcHobo 1 178 0 1626 246 186 69 chr20 68484482 68485124 -3668758 + L1MC4 LINE L1 6892 7458 -350 7977 16 0 0 chr20 68485124 68486099 -3667783 - L1PA2 LINE L1 -1 6154 5180 2360 81 0 0 chr20 68486105 68486412 -3667470 - AluSq SINE Alu -6 307 1 1626 246 186 69 chr20 68486412 68486504 -3667378 + L1MC4 LINE L1 7462 7709 -99 256 151 0 0 chr20 68486483 68486536 -3667346 - L1MC4 LINE L1 -1337 6705 6653 * 385 146 0 0 chr20 68486586 68486641 -3667241 + Tigger1 DNA MER2_type 2364 2418 0 983 119 7 14 chr20 68486643 68486880 -3667002 + (TG)n Simple_repeat Simple_repeat 1 416 0 289 208 26 26 chr20 68486882 68486959 -3666923 + L1MC4 LINE L1 7960 8036 -6 2042 122 13 0 chr20 68487409 68487713 -3666169 - AluSx SINE Alu -2 310 3 189 351 112 22 chr20 68487746 68487880 -3666002 + L2 LINE L2 2910 3055 -217 231 188 0 0 chr20 68487948 68487996 -3665886 + (CA)n Simple_repeat Simple_repeat 1 48 0 231 272 25 62 chr20 68487996 68488077 -3665805 + L2 LINE L2 3195 3272 0 191 243 0 0 chr20 68488823 68488860 -3665022 + MIR SINE MIR 220 256 -6 279 0 0 0 chr20 68489519 68489550 -3664332 + (T)n Simple_repeat Simple_repeat 1 31 0 225 261 141 11 chr20 68489550 68489642 -3664240 - L2 LINE L2 -20 3293 3190 333 100 0 0 chr20 68489826 68489876 -3664006 + (T)n Simple_repeat Simple_repeat 1 50 0 21 57 0 0 chr20 68490743 68490778 -3663104 + GC_rich Low_complexity Low_complexity 1 35 0 21 71 0 0 chr20 68490841 68490883 -3662999 + GC_rich Low_complexity Low_complexity 1 42 0 204 237 21 54 chr20 68490935 68491028 -3662854 + (CCGGG)n Simple_repeat Simple_repeat 5 94 0 42 48 0 0 chr20 68491337 68491400 -3662482 + GC_rich Low_complexity Low_complexity 1 63 0 356 301 68 22 chr20 68492277 68492411 -3661471 - MIR3 SINE MIR -68 140 15 438 172 45 10 chr20 68493156 68493578 -3660304 + (TG)n Simple_repeat Simple_repeat 1 437 0 366 149 41 8 chr20 68493622 68493743 -3660139 + (TG)n Simple_repeat Simple_repeat 2 126 0 244 293 121 0 chr20 68494797 68494913 -3658969 + L2 LINE L2 3138 3267 -5 190 231 115 26 chr20 68495478 68495556 -3658326 + L2 LINE L2 3151 3235 -37 300 338 106 13 chr20 68497983 68498134 -3655748 + L2 LINE L2 2890 3054 -259 879 266 143 25 chr20 68498242 68498742 -3655140 - MLT1F1 LTR MaLR -7 560 4 270 271 0 0 chr20 68498783 68498853 -3655029 - L2 LINE L2 -218 3054 2985 237 33 0 0 chr20 68499634 68499664 -3654218 + (GGGTG)n Simple_repeat Simple_repeat 3 32 0 197 32 0 32 chr20 68499699 68499730 -3654152 + (GGGTG)n Simple_repeat Simple_repeat 3 32 0 428 295 134 13 chr20 68500488 68500712 -3653170 + Charlie8 DNA MER1_type 1 251 -2166 1587 270 104 7 chr20 68501334 68501882 -3652000 - MER97a DNA MER1_type? -291 603 3 4062 211 78 21 chr20 68502742 68503916 -3649966 - Charlie1a DNA MER1_type -1 1454 214 273 229 16 0 chr20 68503960 68504021 -3649861 - Charlie1a DNA MER1_type -1321 134 73 1624 161 0 21 chr20 68506202 68506482 -3647400 + AluJo SINE Alu 15 288 -24 380 318 77 31 chr20 68507692 68507978 -3645904 + L1MC4 LINE L1 6989 7287 -755 492 284 93 54 chr20 68507978 68508425 -3645457 + L1MC4a LINE L1 7322 7714 -71 2201 110 17 0 chr20 68508425 68508726 -3645156 - AluSx SINE Alu -6 306 1 492 284 93 54 chr20 68508726 68508801 -3645081 + L1MC4a LINE L1 7714 7785 0 334 217 43 0 chr20 68509322 68509391 -3644491 + MER5A DNA MER1_type 56 127 -62 418 70 35 23 chr20 68509442 68509528 -3644354 + (TCC)n Simple_repeat Simple_repeat 1 87 0 201 74 0 0 chr20 68510494 68510521 -3643361 + (TG)n Simple_repeat Simple_repeat 2 28 0 206 324 0 0 chr20 68511513 68511580 -3642302 - MIR SINE MIR -47 161 94 212 184 0 0 chr20 68518954 68518992 -3634890 + MIR SINE MIR 112 149 -59 4187 204 32 6 chr20 68519004 68520108 -3633774 + L1MB3 LINE L1 5057 6182 -1 232 226 167 12 chr20 68520197 68520293 -3633589 + MIR SINE MIR 39 148 -105 479 326 67 33 chr20 68520920 68521448 -3632434 - L2 LINE L2 0 3313 2763 1192 264 33 37 chr20 68521622 68522110 -3631772 + L1MD3 LINE L1 36 521 -5875 264 338 26 45 chr20 68522187 68522341 -3631541 + L1MD3 LINE L1 529 679 -5526 440 158 11 0 chr20 68522341 68522436 -3631446 + GA-rich Low_complexity Low_complexity 2 97 0 985 239 40 40 chr20 68522474 68523007 -3630875 + L1MD3 LINE L1 701 8056 -8 * 2068 211 92 77 chr20 68522975 68523589 -3630293 + L1MEc LINE L1 997 1601 -4614 2522 55 14 0 chr20 68523589 68523882 -3630000 + AluY SINE Alu 1 297 -14 2068 211 92 77 chr20 68523882 68524547 -3629335 + L1MEc LINE L1 1601 2298 -3917 2077 124 48 25 chr20 68524547 68524903 -3628979 + THE1B LTR MaLR 1 364 0 2068 211 92 77 chr20 68524903 68524932 -3628950 + L1MEc LINE L1 2298 2325 -3890 716 194 131 42 chr20 68524949 68525140 -3628742 + MER58C DNA MER1_type 7 214 -1 3405 260 88 34 chr20 68525146 68526667 -3627215 + L1MEc LINE L1 2333 4072 -2143 2265 127 0 6 chr20 68526667 68526981 -3626901 + AluSx SINE Alu 1 312 0 3405 260 88 34 chr20 68526981 68527378 -3626504 + L1MEc LINE L1 4072 4446 -1769 2192 153 39 23 chr20 68527383 68527868 -3626014 + L1MB3 LINE L1 5689 6181 -2 566 307 84 46 chr20 68527885 68528077 -3625805 + L1ME1 LINE L1 1041 1224 -5160 348 24 0 0 chr20 68528077 68528118 -3625764 + (CA)n Simple_repeat Simple_repeat 2 42 0 566 307 84 46 chr20 68528118 68528490 -3625392 + L1ME1 LINE L1 1224 1633 -4751 2202 113 0 0 chr20 68528490 68528796 -3625086 + AluSq SINE Alu 1 306 0 566 307 84 46 chr20 68528796 68528834 -3625048 + L1ME1 LINE L1 1633 1668 -4716 1231 117 0 0 chr20 68528837 68528999 -3624883 - AluSg/x SINE Alu -4 308 147 2258 110 0 7 chr20 68529000 68529301 -3624581 - AluSc SINE Alu -10 299 1 3697 245 93 80 chr20 68529342 68529401 -3624481 + L1ME1 LINE L1 1825 1882 -4500 1487 92 37 0 chr20 68529401 68529618 -3624264 + MER30 DNA MER1_type 4 228 -2 3697 245 93 80 chr20 68529618 68530668 -3623214 + L1ME1 LINE L1 1882 2917 -3465 750 155 23 0 chr20 68530668 68530797 -3623085 - FLAM_C SINE Alu -1 132 1 3697 245 93 80 chr20 68530797 68531200 -3622682 + L1ME1 LINE L1 2917 3313 -3069 2063 135 3 7 chr20 68531200 68531497 -3622385 - AluSx SINE Alu -16 296 1 3697 245 93 80 chr20 68531497 68532556 -3621326 + L1ME1 LINE L1 3313 4387 -1995 180 77 0 0 chr20 68532556 68532582 -3621300 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 3270 221 46 34 chr20 68532593 68532824 -3621058 + L1MA7 LINE L1 4484 4711 -1649 1986 96 0 8 chr20 68532824 68533104 -3620778 + AluSx SINE Alu 34 311 0 3270 221 46 34 chr20 68533104 68534724 -3619158 + L1MA7 LINE L1 4711 6360 0 727 204 151 0 chr20 68534730 68534902 -3618980 + AluSg/x SINE Alu 115 312 0 1632 232 29 18 chr20 68534933 68535539 -3618343 + L1ME1 LINE L1 5410 6017 -385 565 283 38 55 chr20 68535589 68535879 -3618003 + L1ME1 LINE L1 6113 6397 -5 6167 242 57 11 chr20 68535888 68538647 -3615235 + L1MD3 LINE L1 3232 6163 -1 428 264 55 20 chr20 68539213 68539384 -3614498 + MIR3 SINE MIR 6 181 -63 234 213 11 75 chr20 68539780 68539874 -3614008 + (CATCC)n Simple_repeat Simple_repeat 5 92 0 290 141 0 16 chr20 68540300 68540364 -3613518 + (TC)n Simple_repeat Simple_repeat 2 64 0 228 135 0 0 chr20 68540363 68540400 -3613482 + (TA)n Simple_repeat Simple_repeat 2 38 0 * 392 184 30 12 chr20 68540406 68540466 -3613416 + (TCTCTG)n Simple_repeat Simple_repeat 2 59 -113 219 69 0 0 chr20 68540466 68540495 -3613387 + (TA)n Simple_repeat Simple_repeat 1 29 0 392 184 30 12 chr20 68540495 68540602 -3613280 + (TCTCTG)n Simple_repeat Simple_repeat 59 172 0 216 0 0 0 chr20 68540614 68540638 -3613244 + (TG)n Simple_repeat Simple_repeat 2 25 0 189 74 0 0 chr20 68540637 68540664 -3613218 + (TA)n Simple_repeat Simple_repeat 2 28 0 * 306 98 0 0 chr20 68540670 68540721 -3613161 + (TC)n Simple_repeat Simple_repeat 2 52 0 211 274 39 0 chr20 68542127 68542178 -3611704 + MIR SINE MIR 82 134 -74 537 263 4 4 chr20 68542317 68542557 -3611325 + (TGGG)n Simple_repeat Simple_repeat 1 240 0 664 214 11 0 chr20 68542577 68542755 -3611127 + (TGGG)n Simple_repeat Simple_repeat 1 180 0 575 301 6 3 chr20 68542781 68543126 -3610756 + (TGGA)n Simple_repeat Simple_repeat 1 346 0 357 210 12 12 chr20 68546098 68546179 -3607703 + MIR3 SINE MIR 121 201 -7 307 291 16 24 chr20 68546483 68546610 -3607272 + MER117 DNA MER1_type 72 197 0 237 346 143 9 chr20 68548914 68549145 -3604737 - L2 LINE L2 -11 3261 3000 2249 115 22 25 chr20 68549157 68549522 -3604360 + THE1B LTR MaLR 1 364 0 392 294 0 16 chr20 68550919 68551045 -3602837 + MIR SINE MIR 118 241 -21 228 254 0 34 chr20 68551983 68552042 -3601840 + GA-rich Low_complexity Low_complexity 4 60 0 427 310 152 15 chr20 68552957 68553154 -3600728 - MIR SINE MIR -3 259 36 216 314 0 0 chr20 68553264 68553334 -3600548 + MIR SINE MIR 44 113 -149 2875 70 20 5 chr20 68555549 68555947 -3597935 + MLT2A1 LTR ERVL 1 404 -40 244 250 0 0 chr20 68555948 68556004 -3597878 + (TA)n Simple_repeat Simple_repeat 2 57 0 297 103 138 0 chr20 68556004 68556062 -3597820 + MLT2A1 LTR ERVL 386 451 -2 5214 64 19 0 chr20 68556072 68556745 -3597137 - HERVL-A2 LTR ERVL -4968 686 1 322 66 66 33 chr20 68556745 68556806 -3597076 - MLT2A2 LTR ERVL 0 453 391 194 0 39 0 chr20 68558877 68558903 -3594979 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2275 93 0 0 chr20 68558911 68559189 -3594693 - AluSg SINE Alu -32 278 1 321 329 13 86 chr20 68562367 68562601 -3591281 + L1MC5 LINE L1 7522 7738 -223 294 274 38 0 chr20 68562613 68562719 -3591163 + L1MC4 LINE L1 7904 8013 -29 2277 114 0 0 chr20 68562965 68563264 -3590618 - AluSq SINE Alu -14 299 1 186 250 17 33 chr20 68564013 68564073 -3589809 + MIR3 SINE MIR 143 201 -7 3426 209 61 43 chr20 68564936 68566221 -3587661 - L1ME1 LINE L1 -5 6161 4863 210 268 36 0 chr20 68566223 68566279 -3587603 + L2 LINE L2 3256 3313 0 2139 102 28 3 chr20 68566352 68566636 -3587246 + AluSp SINE Alu 6 296 -17 745 263 88 20 chr20 68566637 68567020 -3586862 + L1ME2 LINE L1 5551 6159 -5 21 36 0 0 chr20 68567020 68567048 -3586834 + AT_rich Low_complexity Low_complexity 1 28 0 327 288 42 8 chr20 68567716 68567834 -3586048 + L2 LINE L2 3192 3313 0 2543 80 0 3 chr20 68568581 68568893 -3584989 - AluY SINE Alu 0 311 1 180 125 0 0 chr20 68568962 68568994 -3584888 + (ATG)n Simple_repeat Simple_repeat 2 33 0 197 194 0 0 chr20 68569204 68569240 -3584642 + MIR SINE MIR 118 153 -55 304 198 132 74 chr20 68569456 68569577 -3584305 + HAL1 LINE L1 1150 1277 -1230 300 288 8 34 chr20 68569577 68569695 -3584187 + GA-rich Low_complexity Low_complexity 2 116 0 248 255 43 64 chr20 68570018 68570112 -3583770 + MIR SINE MIR 117 208 -54 2155 94 7 24 chr20 68570726 68571023 -3582859 + AluSg SINE Alu 2 293 -17 906 194 4 66 chr20 68571495 68571722 -3582160 + L1MC5 LINE L1 6964 7176 -785 843 255 88 33 chr20 68571716 68572191 -3581691 + L1MC5 LINE L1 7377 7913 -48 * 228 67 0 0 chr20 68572191 68572221 -3581661 + (TA)n Simple_repeat Simple_repeat 2 31 0 2006 106 0 76 chr20 68572223 68572526 -3581356 - AluSg SINE Alu -30 280 1 393 288 34 11 chr20 68574821 68574998 -3578884 + MIR SINE MIR 58 242 -20 196 244 0 0 chr20 68575281 68575326 -3578556 - L2 LINE L2 -18 3295 3251 250 265 31 41 chr20 68575687 68575785 -3578097 + MIR3 SINE MIR 88 184 -24 185 233 96 41 chr20 68575880 68575953 -3577929 - MER5A DNA MER1_type -63 126 50 385 176 14 0 chr20 68576423 68576497 -3577385 + L2 LINE L2 3198 3272 0 626 245 167 0 chr20 68577637 68577829 -3576053 - MER58A DNA MER1_type 0 224 1 252 303 83 18 chr20 68577832 68577941 -3575941 + L2 LINE L2 3151 3266 -6 259 309 49 0 chr20 68578065 68578146 -3575736 - MIR SINE MIR -6 256 172 186 71 0 0 chr20 68578516 68578544 -3575338 + (TTG)n Simple_repeat Simple_repeat 1 28 0 933 137 0 0 chr20 68578549 68578673 -3575209 - FLAM_C SINE Alu -19 124 1 836 227 76 22 chr20 68579515 68579740 -3574142 - L1MC4a LINE L1 -1832 5976 5740 207 69 0 0 chr20 68580369 68580398 -3573484 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 451 250 14 0 chr20 68583998 68584146 -3569736 + GA-rich Low_complexity Low_complexity 2 151 0 942 153 15 51 chr20 68584521 68584717 -3569165 + MER20 DNA MER1_type 29 217 -2 2235 85 13 29 chr20 68584749 68585055 -3568827 + AluSq SINE Alu 1 301 -12 219 305 186 8 chr20 68585090 68585208 -3568674 + MIR SINE MIR 92 230 -32 375 337 112 12 chr20 68586690 68587100 -3566782 - L2 LINE L2 -553 2761 2311 205 290 29 14 chr20 68588870 68588939 -3564943 + MIR SINE MIR 76 145 -63 283 220 17 0 chr20 68589096 68589155 -3564727 - L2 LINE L2 -2 3270 3211 274 238 50 0 chr20 68589284 68589364 -3564518 + MIR SINE MIR 1 84 -178 1057 207 51 8 chr20 68589936 68590192 -3563690 - Charlie5 DNA MER1_type -112 2500 2234 398 337 21 26 chr20 68590403 68590593 -3563289 - L3 LINE CR1 -175 1402 1214 180 256 0 0 chr20 68591498 68591537 -3562345 + L2 LINE L2 3224 3262 -51 1290 251 151 13 chr20 68593473 68593951 -3559931 + MER77 LTR ERV1 58 601 -4 190 160 40 0 chr20 68594888 68594938 -3558944 + CT-rich Low_complexity Low_complexity 5 56 0 341 267 53 38 chr20 68595030 68595161 -3558721 + MIR SINE MIR 1 133 -129 481 326 94 8 chr20 68596120 68596365 -3557517 + HAL1 LINE L1 2240 2505 -2 338 292 18 0 chr20 68596466 68596579 -3557303 + L1MC4a LINE L1 5772 5886 -1922 575 160 38 160 chr20 68596998 68597055 -3556827 - MER53 DNA DNA -2 187 125 1999 95 33 33 chr20 68597055 68597361 -3556521 - AluSx SINE Alu -6 306 1 575 160 38 160 chr20 68597361 68597516 -3556366 - MER53 DNA DNA -64 125 1 1981 130 3 3 chr20 68597698 68597990 -3555892 - AluSx SINE Alu -16 296 5 234 300 42 25 chr20 68598011 68598131 -3555751 - MER58 DNA MER1_type -2182 238 117 1439 186 36 4 chr20 68598133 68598408 -3555474 + AluJo SINE Alu 3 286 -26 245 151 19 0 chr20 68598432 68598485 -3555397 + (TA)n Simple_repeat Simple_repeat 1 54 0 2037 136 0 0 chr20 68599670 68599972 -3553910 + AluSx SINE Alu 1 302 -10 250 360 20 20 chr20 68601440 68601540 -3552342 - MER5A DNA MER1_type -37 152 53 240 323 0 0 chr20 68603189 68603251 -3550631 + MER116 DNA Mariner 19 80 0 313 324 36 14 chr20 68603872 68604011 -3549871 + MIR SINE MIR 31 172 -90 303 248 112 25 chr20 68605166 68605327 -3548555 + MER113 DNA MER1_type? 43 217 -304 2229 102 3 0 chr20 68605474 68605779 -3548103 - AluSg SINE Alu -4 306 1 584 286 94 29 chr20 68606185 68606493 -3547389 - L1MC4a LINE L1 -1851 5957 5630 442 263 0 8 chr20 68607419 68607537 -3546345 + MER20 DNA MER1_type 101 217 -2 545 229 40 34 chr20 68607984 68608159 -3545723 - L1ME4a LINE L1 0 6121 5946 1037 128 75 5 chr20 68608200 68608387 -3545495 - MER20 DNA MER1_type -19 200 1 233 350 86 0 chr20 68608486 68608603 -3545279 + MIR SINE MIR 32 158 -104 185 103 103 0 chr20 68609408 68609447 -3544435 + L2 LINE L2 2910 2952 -320 214 346 13 0 chr20 68610241 68610319 -3543563 - MIR3 SINE MIR -24 184 106 225 305 113 28 chr20 68610750 68610927 -3542955 + L2 LINE L2 3074 3265 -7 225 0 0 0 chr20 68611863 68611888 -3541994 + (CA)n Simple_repeat Simple_repeat 1 25 0 1540 260 131 4 chr20 68612337 68612864 -3541018 - L1MC3 LINE L1 -7 7778 7185 302 252 19 37 chr20 68612867 68612974 -3540908 - MLT1F1 LTR MaLR -450 117 13 1039 260 150 24 chr20 68612977 68613225 -3540657 - L1MC3 LINE L1 -716 7069 6854 2023 132 14 3 chr20 68613225 68613520 -3540362 - AluSx SINE Alu -14 298 1 1039 260 150 24 chr20 68613520 68613725 -3540157 - L1MC3 LINE L1 -931 6854 6559 258 276 133 9 chr20 68613864 68613969 -3539913 + MER20 DNA MER1_type 94 211 -8 274 326 62 23 chr20 68615530 68615659 -3538223 - L2 LINE L2 -3 3269 3136 2371 115 16 40 chr20 68618967 68619340 -3534542 - THE1B LTR MaLR 0 364 1 361 253 84 41 chr20 68619463 68619795 -3534087 + L2 LINE L2 2728 3079 -193 * 442 238 8 33 chr20 68619780 68619902 -3533980 + MIR SINE MIR 18 136 -126 256 347 50 53 chr20 68620686 68620986 -3532896 - MER102b DNA MER1_type 0 341 43 254 260 10 52 chr20 68622741 68622837 -3531045 - L2 LINE L2 -6 3307 3216 433 269 69 0 chr20 68623894 68624054 -3529828 - MER113 DNA MER1_type? -337 184 14 1808 114 59 42 chr20 68625104 68625410 -3528472 - AluSx SINE Alu -1 311 1 227 340 35 14 chr20 68625846 68625987 -3527895 + L1ME LINE L1 5615 5758 -412 373 263 173 8 chr20 68626858 68626991 -3526891 + MIR3 SINE MIR 30 184 -24 195 279 106 75 chr20 68627471 68627736 -3526146 + L2 LINE L2 2336 2608 -706 254 256 34 138 chr20 68627895 68628164 -3525718 + L2 LINE L2 2844 3084 -188 230 316 0 0 chr20 68628288 68628345 -3525537 + L2 LINE L2 3193 3249 -23 194 91 30 0 chr20 68628528 68628561 -3525321 + (CCA)n Simple_repeat Simple_repeat 3 36 0 970 102 27 9 chr20 68628579 68628928 -3524954 + (CCA)n Simple_repeat Simple_repeat 1 536 0 1049 101 19 0 chr20 68628940 68629153 -3524729 + (CCA)n Simple_repeat Simple_repeat 1 217 0 862 76 0 17 chr20 68629796 68630058 -3523824 + AluY SINE Alu 4 310 -1 228 67 0 0 chr20 68630096 68630126 -3523756 + (TTCA)n Simple_repeat Simple_repeat 3 32 0 236 301 43 62 chr20 68630493 68630909 -3522973 + L1M4 LINE L1 4288 4695 -1451 200 347 10 20 chr20 68634092 68634190 -3519692 + L2 LINE L2 3168 3264 -8 547 291 132 14 chr20 68634613 68634833 -3519049 - L3 LINE CR1 -85 1492 1247 1494 132 0 0 chr20 68635928 68636141 -3517741 - AluSx SINE Alu -99 213 1 336 264 11 11 chr20 68636922 68637009 -3516873 + L2 LINE L2 3219 3305 -8 2306 92 3 0 chr20 68637034 68637340 -3516542 + AluSx SINE Alu 1 307 -5 230 270 0 0 chr20 68641572 68641635 -3512247 + C-rich Low_complexity Low_complexity 2 64 0 338 227 98 45 chr20 68642903 68643035 -3510847 + MIR3 SINE MIR 61 199 -9 414 165 0 12 chr20 68643140 68643225 -3510657 + AluJ/FRAM SINE Alu 228 311 -1 346 180 124 119 chr20 68643701 68643895 -3509987 - MER106A DNA MER1_type 0 236 42 214 211 202 10 chr20 68644681 68644785 -3509097 + L3 LINE CR1 1297 1420 -157 224 281 0 0 chr20 68646127 68646184 -3507698 + CT-rich Low_complexity Low_complexity 4 60 0 1367 139 29 0 chr20 68647454 68647662 -3506220 + MER20 DNA MER1_type 3 216 -3 242 318 39 56 chr20 68648400 68648633 -3505249 + L2 LINE L2 2841 3069 -203 27 0 0 0 chr20 68651568 68651595 -3502287 + AT_rich Low_complexity Low_complexity 1 27 0 196 161 0 0 chr20 68655964 68655995 -3497887 + MIR SINE MIR 116 146 -62 192 97 0 0 chr20 68656769 68656800 -3497082 + (GA)n Simple_repeat Simple_repeat 2 32 0 2104 131 17 3 chr20 68657598 68657895 -3495987 - AluSx SINE Alu -11 301 1 2417 85 3 0 chr20 68658027 68658322 -3495560 - AluSg SINE Alu -14 296 1 224 30 30 0 chr20 68658732 68658765 -3495117 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 25 31 0 0 chr20 68658806 68658838 -3495044 + AT_rich Low_complexity Low_complexity 1 32 0 2221 116 3 3 chr20 68659058 68659360 -3494522 - AluSx SINE Alu -10 302 1 2322 91 3 0 chr20 68660107 68660403 -3493479 - AluSq SINE Alu -16 297 1 2314 114 0 13 chr20 68660541 68660857 -3493025 - AluSx SINE Alu 0 312 1 198 103 0 0 chr20 68661361 68661390 -3492492 + (A)n Simple_repeat Simple_repeat 1 29 0 506 208 96 8 chr20 68663259 68663327 -3490555 - MER20 DNA MER1_type -48 171 110 357 62 0 0 chr20 68663327 68663375 -3490507 + (CA)n Simple_repeat Simple_repeat 2 49 0 506 208 96 8 chr20 68663375 68663431 -3490451 - MER20 DNA MER1_type -109 110 36 2354 76 3 3 chr20 68663534 68663823 -3490059 + AluSq SINE Alu 1 289 -24 332 59 69 30 chr20 68663823 68663924 -3489958 + (TA)n Simple_repeat Simple_repeat 1 105 0 1071 144 7 0 chr20 68663982 68664135 -3489747 - AluSp SINE Alu -20 293 140 2268 114 7 0 chr20 68666409 68666717 -3487165 - AluSx SINE Alu -2 310 1 1077 96 0 0 chr20 68666717 68666852 -3487030 - AluSq/x SINE Alu -178 135 1 2339 107 3 0 chr20 68669735 68670043 -3483839 + AluSp SINE Alu 5 313 0 308 252 15 15 chr20 68670058 68670189 -3483693 + A-rich Low_complexity Low_complexity 2 132 0 27 49 0 0 chr20 68670744 68670785 -3483097 + AT_rich Low_complexity Low_complexity 1 41 0 261 83 0 0 chr20 68670945 68670981 -3482901 + (TTCC)n Simple_repeat Simple_repeat 1 36 0 233 186 0 0 chr20 68672105 68672148 -3481734 - L2 LINE L2 -1 3312 3270 202 200 0 0 chr20 68677282 68677322 -3476560 + G-rich Low_complexity Low_complexity 3 42 0 195 42 0 0 chr20 68679244 68679268 -3474614 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2225 45 73 3 chr20 68680457 68680746 -3473136 - AluY SINE Alu -2 309 1 22 0 0 0 chr20 68684323 68684345 -3469537 + AT_rich Low_complexity Low_complexity 1 22 0 38 51 0 0 chr20 68687340 68687399 -3466483 + GC_rich Low_complexity Low_complexity 1 59 0 30 0 0 0 chr20 68687685 68687715 -3466167 + GC_rich Low_complexity Low_complexity 1 30 0 22 70 0 0 chr20 68688120 68688163 -3465719 + GC_rich Low_complexity Low_complexity 1 43 0 234 233 0 0 chr20 68688332 68688392 -3465490 + (CGG)n Simple_repeat Simple_repeat 2 61 0 363 145 0 0 chr20 68688546 68688615 -3465267 + (GAA)n Simple_repeat Simple_repeat 2 70 0 192 40 0 0 chr20 68688651 68688676 -3465206 + (CCG)n Simple_repeat Simple_repeat 1 25 0 22 70 0 0 chr20 68688698 68688741 -3465141 + GC_rich Low_complexity Low_complexity 1 43 0 22 0 0 0 chr20 68689098 68689120 -3464762 + GC_rich Low_complexity Low_complexity 1 22 0 26 32 0 63 chr20 68689635 68689698 -3464184 + GC_rich Low_complexity Low_complexity 1 59 0 198 103 0 0 chr20 68689709 68689738 -3464144 + (CGG)n Simple_repeat Simple_repeat 3 31 0 210 266 26 19 chr20 68689820 68689974 -3463908 + (CCCG)n Simple_repeat Simple_repeat 4 158 0 237 21 43 43 chr20 68689990 68690037 -3463845 + (CCG)n Simple_repeat Simple_repeat 2 48 0 64 62 0 0 chr20 68690180 68690293 -3463589 + GC_rich Low_complexity Low_complexity 1 113 0 21 82 0 0 chr20 68690372 68690421 -3463461 + GC_rich Low_complexity Low_complexity 1 49 0 258 179 0 0 chr20 68690434 68690490 -3463392 + CT-rich Low_complexity Low_complexity 1 56 0 220 256 0 0 chr20 68690652 68690695 -3463187 + G-rich Low_complexity Low_complexity 2 44 0 222 37 0 0 chr20 68691373 68691400 -3462482 + (T)n Simple_repeat Simple_repeat 1 27 0 29 0 0 0 chr20 68691554 68691583 -3462299 + AT_rich Low_complexity Low_complexity 1 29 0 210 219 0 0 chr20 68692475 68692516 -3461366 - MIR SINE MIR -110 152 112 243 103 0 0 chr20 68694932 68694971 -3458911 + (A)n Simple_repeat Simple_repeat 1 39 0 21 0 0 0 chr20 68695877 68695898 -3457984 + AT_rich Low_complexity Low_complexity 1 21 0 421 163 10 10 chr20 68697960 68698058 -3455824 + (CA)n Simple_repeat Simple_repeat 1 98 0 2337 81 13 13 chr20 68701037 68701345 -3452537 - AluSx SINE Alu -2 310 3 2366 87 0 0 chr20 68704854 68705141 -3448741 - AluSg SINE Alu -23 287 1 204 235 0 0 chr20 68707113 68707164 -3446718 + A-rich Low_complexity Low_complexity 1 51 0 22 35 0 0 chr20 68709463 68709492 -3444390 + AT_rich Low_complexity Low_complexity 1 29 0 233 274 235 0 chr20 68709927 68710029 -3443853 + L1P LINE L1 4878 5003 -1143 2414 57 0 0 chr20 68711880 68712162 -3441720 + AluY SINE Alu 19 300 -11 401 255 56 61 chr20 68712545 68712776 -3441106 - L2 LINE L2 -96 3217 2988 2005 94 3 54 chr20 68712831 68713160 -3440722 + AluSx SINE Alu 1 314 0 357 186 12 12 chr20 68713160 68713246 -3440636 - MIR SINE MIR -11 251 166 430 224 90 8 chr20 68713543 68713677 -3440205 - MLT1L LTR MaLR -1 614 470 311 111 0 19 chr20 68713914 68713968 -3439914 + (TCCC)n Simple_repeat Simple_repeat 4 56 0 1928 165 0 3 chr20 68713980 68714277 -3439605 - AluSx SINE Alu -16 296 1 2270 117 3 0 chr20 68714322 68714631 -3439251 - AluSp SINE Alu -1 312 3 614 239 38 6 chr20 68714952 68715111 -3438771 + L1ME3A LINE L1 5987 6150 -20 561 297 69 51 chr20 68715136 68715820 -3438062 + L1M4 LINE L1 3510 4205 -1941 1860 83 116 18 chr20 68715824 68716101 -3437781 + AluSc SINE Alu 4 307 -2 918 213 0 0 chr20 68716101 68716265 -3437617 + AluJb SINE Alu 134 297 -15 926 170 7 7 chr20 68716397 68716544 -3437338 + FRAM SINE Alu 5 151 -15 22 0 0 0 chr20 68716544 68716566 -3437316 + AT_rich Low_complexity Low_complexity 1 22 0 830 160 0 0 chr20 68716574 68716705 -3437177 + AluJo SINE Alu 1 131 -171 2313 112 0 13 chr20 68716763 68717076 -3436806 + AluSg SINE Alu 1 309 -1 374 213 61 73 chr20 68717105 68717269 -3436613 - L1MC5 LINE L1 -407 7554 7393 461 204 159 40 chr20 68717330 68717506 -3436376 + L1MC5 LINE L1 7611 7807 -154 580 244 17 0 chr20 68717559 68717678 -3436204 + MER63A DNA MER1_type 53 173 -37 390 231 0 0 chr20 68717703 68717781 -3436101 + L1MC5 LINE L1 7808 7885 -76 856 200 38 0 chr20 68717828 68717988 -3435894 + AluJo SINE Alu 137 302 0 1826 155 0 45 chr20 68718068 68718377 -3435505 + AluJb SINE Alu 1 295 -17 518 218 153 99 chr20 68718408 68718526 -3435356 - MIR SINE MIR -15 247 112 2346 101 7 0 chr20 68718526 68718834 -3435048 + AluSx SINE Alu 1 310 -2 518 218 153 99 chr20 68718834 68718917 -3434965 - MIR SINE MIR -150 112 35 453 171 105 0 chr20 68718955 68719060 -3434822 - LTR9B LTR ERV1 -84 560 445 423 313 135 39 chr20 68719470 68719825 -3434057 - L2 LINE L2 -1 3312 2924 200 329 0 0 chr20 68720040 68720113 -3433769 + L2 LINE L2 3236 3308 -5 1863 118 0 30 chr20 68721729 68721999 -3431883 + AluSx SINE Alu 42 303 -9 195 42 0 0 chr20 68722520 68722544 -3431338 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 305 309 94 17 chr20 68722654 68722835 -3431047 + L1M4 LINE L1 4065 4259 -1887 259 178 27 62 chr20 68723153 68723299 -3430583 + (TTATA)n Simple_repeat Simple_repeat 4 144 0 235 143 14 29 chr20 68723329 68723399 -3430483 + (TTATA)n Simple_repeat Simple_repeat 5 73 0 266 153 17 0 chr20 68723473 68723532 -3430350 + (TTATA)n Simple_repeat Simple_repeat 5 64 0 212 204 0 19 chr20 68723629 68723683 -3430199 + (TTATA)n Simple_repeat Simple_repeat 1 53 0 320 280 51 0 chr20 68723694 68723812 -3430070 - MIR SINE MIR -123 139 16 233 197 13 0 chr20 68723923 68723999 -3429883 + (TG)n Simple_repeat Simple_repeat 2 78 0 1053 98 0 0 chr20 68724029 68724162 -3429720 + AluSq/x SINE Alu 7 139 -174 1050 131 149 0 chr20 68724165 68724340 -3429542 - MER30 DNA MER1_type -29 201 1 1864 166 3 0 chr20 68725244 68725539 -3428343 - AluJb SINE Alu -16 296 1 717 306 109 14 chr20 68725680 68726046 -3427836 - MLT1I LTR MaLR 0 409 9 268 237 13 0 chr20 68726376 68726452 -3427430 - L2 LINE L2 -1296 2018 1942 348 179 154 24 chr20 68726457 68726580 -3427302 + L1MC5 LINE L1 7768 7906 -55 2412 91 0 7 chr20 68726583 68726891 -3426991 - AluSq SINE Alu -7 306 1 436 260 75 50 chr20 68726994 68727194 -3426688 + MLT1G1 LTR MaLR 3 207 -388 975 144 54 59 chr20 68727249 68727292 -3426590 - L1MB2 LINE L1 -9 6162 6120 2373 62 14 0 chr20 68727292 68727581 -3426301 - AluY SINE Alu -18 293 1 975 144 54 59 chr20 68727581 68727759 -3426123 - L1MB2 LINE L1 -51 6120 5942 481 290 152 13 chr20 68727759 68728071 -3425811 + MLT1G1 LTR MaLR 215 520 -10 410 310 181 17 chr20 68728105 68728203 -3425679 - L2 LINE L2 -1498 1816 1735 2318 118 0 6 chr20 68728203 68728518 -3425364 - AluSq SINE Alu 0 313 1 410 310 181 17 chr20 68728518 68729115 -3424767 - L2 LINE L2 -1579 1735 1007 444 82 0 0 chr20 68729123 68729184 -3424698 + (TG)n Simple_repeat Simple_repeat 1 61 0 352 305 55 6 chr20 68729206 68729370 -3424512 + L1ME LINE L1 5604 5775 -346 359 324 55 0 chr20 68729534 68729672 -3424210 + MLT1K LTR MaLR 432 580 -8 1907 173 43 11 chr20 68729672 68730024 -3423858 + MLT1A1 LTR MaLR 1 363 -2 307 232 116 50 chr20 68730420 68731097 -3422785 - L1MC5 LINE L1 -236 7725 6969 22 0 0 0 chr20 68731105 68731127 -3422755 + AT_rich Low_complexity Low_complexity 1 22 0 1564 101 36 0 chr20 68731208 68731427 -3422455 + L1PA10 LINE L1 5939 6165 -3 1916 148 0 7 chr20 68731464 68731747 -3422135 + AluJb SINE Alu 11 291 -21 2297 92 0 0 chr20 68731753 68732045 -3421837 + AluSq SINE Alu 1 292 -21 12728 165 19 19 chr20 68732070 68732366 -3421516 + L1MB7 LINE L1 2636 2931 -3215 1582 191 67 0 chr20 68732366 68732649 -3421233 + AluJo SINE Alu 1 302 -10 12728 165 19 19 chr20 68732649 68734016 -3419866 + L1MB7 LINE L1 2931 4297 -1849 2395 96 6 3 chr20 68734016 68734328 -3419554 + AluSq SINE Alu 1 313 0 12728 165 19 19 chr20 68734328 68735043 -3418839 + L1MB7 LINE L1 4297 5018 -1128 2275 102 0 7 chr20 68735043 68735338 -3418544 + AluSx SINE Alu 1 293 -19 12728 165 19 19 chr20 68735338 68735432 -3418450 + L1MB7 LINE L1 5017 5110 -1036 1078 186 46 133 chr20 68735433 68735848 -3418034 - L1M4 LINE L1 -1185 5459 5081 4100 222 75 30 chr20 68735865 68735895 -3417987 - L1M4 LINE L1 -5393 1149 1122 2088 139 3 0 chr20 68735895 68736190 -3417692 - AluSx SINE Alu -16 296 1 4100 222 75 30 chr20 68736190 68737177 -3416705 - L1M4 LINE L1 -5420 1122 86 569 99 25 0 chr20 68737177 68737258 -3416624 + AluSg/x SINE Alu 219 301 -11 427 217 11 0 chr20 68737260 68737352 -3416530 - L1M4 LINE L1 -6448 94 2 7617 188 93 110 chr20 68737354 68738685 -3415197 - Cheshire DNA MER1_type -7 2413 1061 2509 61 0 23 chr20 68738685 68738995 -3414887 + AluY SINE Alu 1 303 -8 7617 188 93 110 chr20 68738995 68739088 -3414794 - Cheshire DNA MER1_type -1359 1061 968 2232 110 0 0 chr20 68739088 68739378 -3414504 + AluSx SINE Alu 1 290 -22 308 23 45 0 chr20 68739381 68739425 -3414457 + (CAAAA)n Simple_repeat Simple_repeat 1 46 0 1218 151 0 0 chr20 68739429 68739614 -3414268 + AluSg/x SINE Alu 128 312 0 7617 188 93 110 chr20 68739614 68740450 -3413432 - Cheshire DNA MER1_type -1457 963 1 2210 132 0 0 chr20 68740470 68740773 -3413109 - AluSx SINE Alu -9 303 1 2658 203 145 11 chr20 68741028 68741669 -3412213 + L1MB7 LINE L1 5445 6171 -13 2214 107 23 10 chr20 68741842 68742151 -3411731 + AluSq SINE Alu 1 313 0 2409 92 0 0 chr20 68742290 68742595 -3411287 - AluSg SINE Alu -5 305 1 2491 84 0 0 chr20 68743658 68743966 -3409916 + AluSx SINE Alu 5 312 0 2292 102 3 0 chr20 68744779 68745073 -3408809 - AluSx SINE Alu -17 295 1 2061 134 24 0 chr20 68745083 68745373 -3408509 - AluSx SINE Alu -15 297 1 524 72 0 0 chr20 68745637 68745706 -3408176 + HSMAR1 DNA Mariner 4 72 -1215 9128 83 17 4 chr20 68746722 68747934 -3405948 + HSMAR1 DNA Mariner 57 1284 -3 24 77 0 0 chr20 68747936 68747988 -3405894 + AT_rich Low_complexity Low_complexity 1 52 0 359 71 83 30 chr20 68747988 68748156 -3405726 + (TA)n Simple_repeat Simple_repeat 1 177 0 1459 193 30 0 chr20 68748192 68748461 -3405421 - AluJb SINE Alu -31 281 5 678 144 0 124 chr20 68748798 68748951 -3404931 + AluJb SINE Alu 2 135 -177 1933 105 0 34 chr20 68749164 68749499 -3404383 - AluSx SINE Alu 0 325 1 9102 219 45 22 chr20 68749538 68750404 -3403478 + L1ME LINE L1 2597 3441 -2705 1516 109 0 0 chr20 68750404 68750615 -3403267 + AluSg/x SINE Alu 84 294 -18 9102 219 45 22 chr20 68750615 68752383 -3401499 + L1ME LINE L1 3441 5293 -853 4977 90 46 15 chr20 68752373 68752664 -3401218 + L1PB1 LINE L1 5389 5669 -482 * 2147 116 0 0 chr20 68752664 68752966 -3400916 + AluSx SINE Alu 1 302 -10 4977 90 46 15 chr20 68752966 68753070 -3400812 + L1PB1 LINE L1 5669 5768 -383 354 45 0 0 chr20 68753070 68753114 -3400768 + (CA)n Simple_repeat Simple_repeat 2 45 0 4977 90 46 15 chr20 68753114 68753454 -3400428 + L1PB1 LINE L1 5768 6148 -3 241 247 72 0 chr20 68753467 68753564 -3400318 + L1ME LINE L1 5293 5396 -782 258 105 0 0 chr20 68753590 68753628 -3400254 + (A)n Simple_repeat Simple_repeat 1 38 0 690 202 48 96 chr20 68753628 68753836 -3400046 + L1ME LINE L1 5383 5580 -586 648 147 7 112 chr20 68753841 68753984 -3399898 + AluJo SINE Alu 7 134 -178 354 203 8 138 chr20 68753988 68754111 -3399771 + L1ME LINE L1 5570 5661 -505 963 169 0 12 chr20 68754216 68754382 -3399500 + AluJo SINE Alu 133 296 -16 412 179 12 12 chr20 68754384 68754468 -3399414 + L1MC5 LINE L1 7314 7397 -564 6513 124 62 60 chr20 68754542 68755025 -3398857 - Tigger3b DNA MER2_type -1797 1231 750 1933 119 7 20 chr20 68755025 68755328 -3398554 - AluSx SINE Alu -11 301 3 6513 124 62 60 chr20 68755328 68755789 -3398093 - Tigger3b DNA MER2_type -2278 750 281 1899 104 11 32 chr20 68755789 68756095 -3397787 + AluSq SINE Alu 11 310 0 6513 124 62 60 chr20 68756095 68756377 -3397505 - Tigger3b DNA MER2_type -2747 281 1 321 247 14 0 chr20 68756440 68756513 -3397369 + L1MC4 LINE L1 6750 6823 -1219 235 173 0 39 chr20 68756513 68756565 -3397317 + Tigger3(Golem) DNA MER2_type 222 271 -2758 828 203 190 19 chr20 68756593 68756743 -3397139 + L1MC4 LINE L1 6871 6994 -1048 1928 144 0 0 chr20 68756743 68757066 -3396816 + AluSx SINE Alu 1 323 0 828 203 190 19 chr20 68757066 68757230 -3396652 + L1MC4 LINE L1 6994 7240 -802 386 191 9 61 chr20 68757243 68757358 -3396524 + L1ME LINE L1 41 149 -5921 1954 146 6 19 chr20 68757529 68757845 -3396037 - AluSx SINE Alu 0 312 1 702 280 33 61 chr20 68758365 68758822 -3395060 + L1ME LINE L1 498 941 -5129 239 199 72 143 chr20 68758835 68758920 -3394962 + L1MC5 LINE L1 7563 7653 -308 2038 141 0 0 chr20 68758920 68759218 -3394664 + AluSx SINE Alu 1 298 -14 239 199 72 143 chr20 68759218 68759439 -3394443 + L1MC5 LINE L1 7653 7847 -114 243 143 18 36 chr20 68759596 68759652 -3394230 + CT-rich Low_complexity Low_complexity 5 59 0 1524 158 124 0 chr20 68759737 68760002 -3393880 + AluJo SINE Alu 1 298 -4 336 279 49 69 chr20 68760410 68760614 -3393268 + MLT1K LTR MaLR 315 514 -74 2117 104 0 7 chr20 68760619 68760927 -3392955 - AluSg SINE Alu -4 306 1 406 252 95 17 chr20 68760995 68761231 -3392651 - LTR16A1 LTR ERVL 0 491 168 8567 141 98 37 chr20 68761465 68761769 -3392113 + L1MCa LINE L1 286 570 -5856 212 31 62 0 chr20 68761769 68761801 -3392081 + A-rich Low_complexity Low_complexity 2 35 0 8567 141 98 37 chr20 68761801 68762099 -3391783 + L1MCa LINE L1 570 848 -5578 186 71 0 0 chr20 68762099 68762127 -3391755 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 8567 141 98 37 chr20 68762127 68762450 -3391432 + L1MCa LINE L1 848 1150 -5276 2132 118 3 16 chr20 68762450 68762784 -3391098 + AluSq SINE Alu 1 313 0 8567 141 98 37 chr20 68762784 68762984 -3390898 + L1MCa LINE L1 1150 1336 -5090 180 97 0 0 chr20 68762984 68763015 -3390867 + (CAA)n Simple_repeat Simple_repeat 1 31 0 8567 141 98 37 chr20 68763015 68763562 -3390320 + L1MCa LINE L1 1336 2063 -4363 838 154 0 37 chr20 68764369 68764531 -3389351 - FRAM SINE Alu -10 166 11 2082 80 14 10 chr20 68764769 68765058 -3388824 - AluY SINE Alu -9 302 13 1918 133 0 26 chr20 68765089 68765391 -3388491 - AluSx SINE Alu -18 294 1 2206 117 7 0 chr20 68765391 68765697 -3388185 - AluSx SINE Alu -3 309 1 734 229 80 28 chr20 68766990 68767278 -3386604 - L1MC5 LINE L1 -49 7912 7610 6697 150 12 18 chr20 68767308 68769001 -3384881 + L1MA4 LINE L1 4136 5823 -477 1300 166 97 21 chr20 68769001 68769291 -3384591 + AluJo SINE Alu 1 312 0 6697 150 12 18 chr20 68769291 68769487 -3384395 + L1MA4 LINE L1 5823 6019 -281 230 207 17 0 chr20 68769493 68769551 -3384331 + L1MB3 LINE L1 6087 6145 -38 483 280 68 21 chr20 68769683 68769919 -3383963 - L1MC5 LINE L1 -389 7572 7326 771 232 119 0 chr20 68770212 68770389 -3383493 - MER58C DNA MER1_type -15 200 3 311 294 64 0 chr20 68770401 68770510 -3383372 - L1MC5 LINE L1 -844 7117 7002 1572 165 3 18 chr20 68770517 68770802 -3383080 + AluJb SINE Alu 15 295 -17 2324 73 3 16 chr20 68770804 68771119 -3382763 + AluY SINE Alu 1 311 0 351 305 102 38 chr20 68771377 68771613 -3382269 + LTR16C LTR ERVL 149 399 -92 836 218 0 0 chr20 68771811 68772017 -3381865 + FRAM SINE Alu 1 176 0 1738 153 0 7 chr20 68772017 68772292 -3381590 + AluSx SINE Alu 1 273 -39 609 119 0 25 chr20 68772293 68772411 -3381471 + (GAA)n Simple_repeat Simple_repeat 2 116 0 1551 246 128 42 chr20 68772424 68772866 -3381016 - L1MEc LINE L1 -3930 3208 2806 2282 81 3 0 chr20 68772866 68773164 -3380718 - AluSc SINE Alu -10 299 1 1551 246 128 42 chr20 68773164 68773200 -3380682 - L1MEc LINE L1 -4332 2806 2775 1865 109 46 33 chr20 68773200 68773504 -3380378 + AluSq SINE Alu 1 308 -5 1551 246 128 42 chr20 68773504 68773925 -3379957 - L1MEc LINE L1 -4363 2775 2275 528 274 39 29 chr20 68773953 68774157 -3379725 - L1MEc LINE L1 -6647 212 7 804 350 30 27 chr20 68774169 68774273 -3379609 - L2 LINE L2 -530 2784 2682 2046 191 167 16 chr20 68774273 68774764 -3379118 - MLT1F1 LTR MaLR -2 565 1 804 350 30 27 chr20 68774764 68775028 -3378854 - L2 LINE L2 -632 2682 2415 345 164 0 45 chr20 68775035 68775145 -3378737 + CT-rich Low_complexity Low_complexity 1 105 0 198 328 49 0 chr20 68775237 68775298 -3378584 + L2 LINE L2 3010 3073 -240 278 215 215 0 chr20 68775365 68775444 -3378438 + L2 LINE L2 3176 3271 -1 2118 110 0 38 chr20 68775486 68775804 -3378078 - AluSx SINE Alu -6 306 1 2498 52 0 3 chr20 68775958 68776264 -3377618 - AluY SINE Alu -6 305 1 187 331 82 48 chr20 68776632 68776925 -3376957 + L2 LINE L2 2268 2570 -744 247 337 12 0 chr20 68777077 68777160 -3376722 - MIR SINE MIR -1 261 178 548 303 188 28 chr20 68777197 68777633 -3376249 + L2 LINE L2 2807 3312 -1 1524 162 44 37 chr20 68777731 68778028 -3375854 - AluJo SINE Alu -13 299 1 293 247 0 0 chr20 68778097 68778174 -3375708 + L1PA16 LINE L1 5952 6028 -138 329 100 86 0 chr20 68778192 68778262 -3375620 + L1PA16 LINE L1 6089 6164 -2 303 176 59 47 chr20 68778408 68778493 -3375389 + ORSL DNA AcHobo 15 100 -175 2258 87 10 0 chr20 68778500 68778860 -3375022 - AluSq SINE Alu 0 363 1 2226 85 0 0 chr20 68778875 68779168 -3374714 - AluSx SINE Alu -19 293 1 239 67 0 0 chr20 68779192 68779222 -3374660 + ORSL DNA AcHobo 185 214 -61 214 294 0 18 chr20 68779421 68779530 -3374352 + C-rich Low_complexity Low_complexity 3 109 0 22 0 0 0 chr20 68779692 68779714 -3374168 + GC_rich Low_complexity Low_complexity 1 22 0 43 35 0 0 chr20 68779805 68779862 -3374020 + GC_rich Low_complexity Low_complexity 1 57 0 24 53 0 0 chr20 68779954 68779992 -3373890 + GC_rich Low_complexity Low_complexity 1 38 0 2215 102 0 3 chr20 68780419 68780733 -3373149 - AluSq SINE Alu 0 313 1 306 373 63 0 chr20 68781141 68781299 -3372583 - MIR SINE MIR -60 202 35 2164 108 7 0 chr20 68781407 68781712 -3372170 - AluSq SINE Alu -6 307 1 2098 93 48 0 chr20 68781712 68782002 -3371880 - AluSx SINE Alu -8 304 1 240 301 194 0 chr20 68782017 68782120 -3371762 - MIR3 SINE MIR -8 200 78 518 306 128 49 chr20 68782484 68783161 -3370721 - L2 LINE L2 -457 2857 2127 1035 185 62 0 chr20 68783304 68783515 -3370367 - MER58A DNA MER1_type 0 224 1 187 380 0 22 chr20 68783523 68783615 -3370267 + L2 LINE L2 3102 3191 -81 185 279 118 66 chr20 68783695 68783831 -3370051 - MIR3 SINE MIR -17 191 49 677 319 27 19 chr20 68783960 68784220 -3369662 - MIR SINE MIR 0 262 1 182 400 0 0 chr20 68784224 68784279 -3369603 + MIR SINE MIR 158 212 -50 1321 170 65 31 chr20 68784625 68784919 -3368963 - AluJb SINE Alu -8 304 1 922 301 93 5 chr20 68786390 68786809 -3367073 - LTR16B LTR ERVL -4 460 5 183 260 143 0 chr20 68787558 68787635 -3366247 - MIR SINE MIR -62 146 59 2262 90 3 13 chr20 68788391 68788701 -3365181 + AluSp SINE Alu 1 307 -6 1412 151 186 0 chr20 68790891 68791143 -3362739 + AluJb SINE Alu 2 300 -2 2304 88 7 0 chr20 68792558 68792866 -3361016 + AluSp SINE Alu 1 310 -3 429 209 79 51 chr20 68794610 68794787 -3359095 + MER20 DNA MER1_type 31 212 -7 2046 114 0 16 chr20 68795151 68795458 -3358424 + AluJb SINE Alu 1 302 -10 2370 71 0 17 chr20 68796551 68796848 -3357034 + AluSq SINE Alu 20 311 -2 889 130 30 0 chr20 68796852 68796983 -3356899 + AluJo SINE Alu 1 135 -177 22 0 0 0 chr20 68796983 68797005 -3356877 + AT_rich Low_complexity Low_complexity 1 22 0 2340 112 0 0 chr20 68797300 68797605 -3356277 - AluSx SINE Alu 0 312 8 2491 55 0 0 chr20 68798066 68798358 -3355524 + AluY SINE Alu 1 292 -19 2214 98 3 3 chr20 68798369 68798677 -3355205 + AluSp SINE Alu 1 308 0 2251 111 3 0 chr20 68799102 68799399 -3354483 - AluSx SINE Alu -11 301 4 205 245 19 0 chr20 68800073 68800126 -3353756 + L2 LINE L2 3003 3056 -257 258 276 69 26 chr20 68801318 68801434 -3352448 + L2 LINE L2 1912 2032 -1282 786 240 0 12 chr20 68801683 68801854 -3352028 + Tigger5 DNA MER2_type 2155 2323 0 180 280 191 6 chr20 68801872 68802029 -3351853 - L2 LINE L2 -180 3133 2948 508 281 205 20 chr20 68802081 68802569 -3351313 - L2 LINE L2 -492 2822 2245 274 319 120 0 chr20 68802896 68803112 -3350770 - L2 LINE L2 -1764 1550 1309 200 257 138 46 chr20 68803608 68803717 -3350165 + MIR SINE MIR 39 157 -105 289 266 17 45 chr20 68805375 68805552 -3348330 + C-rich Low_complexity Low_complexity 4 175 0 21 0 0 0 chr20 68805738 68805759 -3348123 + GC_rich Low_complexity Low_complexity 1 21 0 317 210 0 0 chr20 68807340 68807402 -3346480 + MER45 DNA AcHobo 1520 1581 0 2317 114 0 3 chr20 68807790 68808097 -3345785 - AluSg SINE Alu -4 306 1 221 299 122 19 chr20 68809125 68809232 -3344650 - MIR SINE MIR -97 165 48 3773 139 14 22 chr20 68809791 68810269 -3343613 - MER41B LTR ERV1 0 635 162 2294 107 0 10 chr20 68810269 68810578 -3343304 - AluSq SINE Alu -7 306 1 3773 139 14 22 chr20 68810578 68810739 -3343143 - MER41B LTR ERV1 -473 162 1 412 262 139 21 chr20 68810957 68811144 -3342738 - L2 LINE L2 -10 3303 3095 242 294 65 0 chr20 68811885 68811977 -3341905 + MIR SINE MIR 34 131 -77 192 77 0 0 chr20 68812372 68812398 -3341484 + (TG)n Simple_repeat Simple_repeat 2 27 0 192 315 68 0 chr20 68813834 68813907 -3339975 - MIR SINE MIR -77 185 108 270 270 252 0 chr20 68814573 68814688 -3339194 - L2 LINE L2 -10 3262 3119 670 303 36 31 chr20 68815203 68815592 -3338290 - L1MC4 LINE L1 -11 8031 7641 2206 121 0 3 chr20 68816680 68816977 -3336905 - AluSx SINE Alu -16 296 1 1742 166 32 11 chr20 68818162 68818446 -3335436 - AluJb SINE Alu -21 291 2 2319 105 3 0 chr20 68818448 68818752 -3335130 - AluSq SINE Alu -8 305 1 404 145 29 0 chr20 68819233 68819302 -3334580 - L1M3 LINE L1 -403 5768 5698 2360 116 0 7 chr20 68819981 68820327 -3333555 + AluSq SINE Alu 1 313 0 2151 82 61 0 chr20 68820327 68820606 -3333276 + AluSc SINE Alu 1 296 -13 199 326 146 0 chr20 68826411 68826500 -3327382 + MIR SINE MIR 29 130 -78 234 200 152 90 chr20 68828809 68828954 -3324928 + L1ME4a LINE L1 5920 6073 -48 217 290 113 75 chr20 68829434 68829654 -3324228 + MIR SINE MIR 35 262 0 27 0 0 0 chr20 68830765 68830792 -3323090 + GC_rich Low_complexity Low_complexity 1 27 0 21 36 0 0 chr20 68833191 68833219 -3320663 + AT_rich Low_complexity Low_complexity 1 28 0 255 219 300 44 chr20 68833721 68833881 -3320001 + L2 LINE L2 2773 2973 -341 389 237 61 30 chr20 68833999 68834130 -3319752 + L2 LINE L2 3169 3303 -10 290 257 50 0 chr20 68834274 68834375 -3319507 + MER106A DNA MER1_type 131 236 0 629 274 75 0 chr20 68834399 68834585 -3319297 - MIR SINE MIR -15 247 48 183 229 83 0 chr20 68837465 68837513 -3316369 - L2 LINE L2 -574 2740 2689 188 176 118 20 chr20 68838748 68838799 -3315083 + L2 LINE L2 3258 3313 0 377 402 14 9 chr20 68838929 68839148 -3314734 - L2 LINE L2 -932 2382 2163 2150 92 0 77 chr20 68839693 68840018 -3313864 + AluSx SINE Alu 1 300 -12 384 295 185 0 chr20 68841759 68842013 -3311869 + L2 LINE L2 3012 3312 -1 271 256 39 0 chr20 68842061 68842139 -3311743 + L2 LINE L2 3170 3250 -63 2224 117 0 20 chr20 68843397 68843697 -3310185 - AluSx SINE Alu -17 295 2 4567 87 44 0 chr20 68844020 68844652 -3309230 - PABL_A LTR ERV1 0 660 1 428 218 0 0 chr20 68844698 68844776 -3309106 + MER21B LTR ERV1 20 97 -766 235 282 113 8 chr20 68844796 68844920 -3308962 + MER21A LTR ERV1 748 884 -47 366 156 0 0 chr20 68845308 68845372 -3308510 + CT-rich Low_complexity Low_complexity 4 67 0 2123 146 10 0 chr20 68845377 68845686 -3308196 - AluSx SINE Alu 0 312 1 1094 152 0 18 chr20 68845689 68845854 -3308028 - AluJb SINE Alu -14 298 137 920 154 39 48 chr20 68845985 68846193 -3307689 + MER20 DNA MER1_type 14 219 0 342 326 45 41 chr20 68846222 68846443 -3307439 + L2 LINE L2 2819 3040 -232 244 136 11 45 chr20 68847245 68847333 -3306549 + (TA)n Simple_repeat Simple_repeat 1 85 0 2257 114 3 0 chr20 68847349 68847657 -3306225 - AluSx SINE Alu -3 309 1 748 125 36 0 chr20 68848251 68848501 -3305381 - FLAM_C SINE Alu 0 254 1 2267 117 0 7 chr20 68849068 68849377 -3304505 - AluSx SINE Alu -5 307 1 305 270 135 0 chr20 68849724 68849813 -3304069 + L2 LINE L2 3212 3312 -1 586 304 89 41 chr20 68851024 68851110 -3302772 + L1ME LINE L1 4309 4389 -1757 2266 108 7 0 chr20 68851110 68851406 -3302476 + AluSx SINE Alu 1 298 -14 586 304 89 41 chr20 68851406 68852004 -3301878 + L1ME LINE L1 4389 5026 -1120 1994 137 7 7 chr20 68852147 68852439 -3301443 + AluSx SINE Alu 1 292 -20 180 0 0 0 chr20 68852439 68852459 -3301423 + (TA)n Simple_repeat Simple_repeat 2 21 0 944 272 127 21 chr20 68852473 68852909 -3300973 + L1ME LINE L1 5295 5751 -370 2705 35 0 0 chr20 68853301 68853612 -3300270 - AluY SINE Alu 0 311 1 353 309 44 82 chr20 68854773 68855161 -3298721 + L1 LINE L1 2170 2542 -3604 383 302 110 59 chr20 68855231 68855932 -3297950 + L1 LINE L1 2679 3445 -2701 21 57 0 0 chr20 68856021 68856056 -3297826 + AT_rich Low_complexity Low_complexity 1 35 0 350 229 124 26 chr20 68856173 68856326 -3297556 + L1 LINE L1 3771 3938 -2208 22 23 0 45 chr20 68856365 68856389 -3297493 + AT_rich Low_complexity Low_complexity 1 24 -18 2128 137 0 0 chr20 68856389 68856695 -3297187 - AluSx SINE Alu -6 306 1 22 23 0 45 chr20 68856695 68856714 -3297168 + AT_rich Low_complexity Low_complexity 24 42 0 2017 125 0 14 chr20 68856717 68857035 -3296847 + AluJb SINE Alu 1 314 0 370 236 20 177 chr20 68857615 68857818 -3296064 + MER69 DNA AcHobo 3 2522 -4 2359 97 3 3 chr20 68857868 68858179 -3295703 + AluSq SINE Alu 1 311 -2 3191 84 10 2 chr20 68858221 68858637 -3295245 + L1PA8 LINE L1 5754 6172 0 2108 131 0 0 chr20 68858881 68859179 -3294703 - AluSx SINE Alu -14 298 1 1936 118 33 0 chr20 68859256 68859527 -3294355 + AluSg SINE Alu 16 295 -15 519 294 32 27 chr20 68860080 68860267 -3293615 + MIR SINE MIR 3 190 -72 267 149 85 0 chr20 68860333 68860380 -3293502 + MIR SINE MIR 119 169 -93 193 248 91 74 chr20 68860412 68860533 -3293349 - L2 LINE L2 0 3272 3150 336 322 23 23 chr20 68860722 68860936 -3292946 + L1ME4a LINE L1 5684 5897 -224 331 181 96 32 chr20 68861130 68861224 -3292658 - L1ME3 LINE L1 0 6162 6071 410 184 12 35 chr20 68861266 68861382 -3292500 - L1ME3 LINE L1 -19 6145 6041 2314 86 3 7 chr20 68863361 68863664 -3290218 - AluSx SINE Alu -10 302 1 23 0 0 0 chr20 68864163 68864186 -3289696 + AT_rich Low_complexity Low_complexity 1 23 0 365 263 61 31 chr20 68864726 68864984 -3288898 + L1ME LINE L1 1304 1515 -4908 310 276 0 0 chr20 68865009 68865093 -3288789 - L1M4 LINE L1 -1998 4148 4065 245 246 0 0 chr20 68865119 68865176 -3288706 + L1ME3 LINE L1 6104 6160 -2 189 0 0 0 chr20 68865990 68866011 -3287871 + (T)n Simple_repeat Simple_repeat 1 21 0 1530 215 44 0 chr20 68866254 68866570 -3287312 + MER58B DNA MER1_type 4 333 -8 2188 181 43 18 chr20 68866573 68867020 -3286862 + MLT1C LTR MaLR 1 365 -9 23 0 0 0 chr20 68867342 68867365 -3286517 + AT_rich Low_complexity Low_complexity 1 23 0 272 288 56 32 chr20 68868295 68868420 -3285462 + L2 LINE L2 3143 3270 -2 983 151 5 16 chr20 68868591 68868776 -3285106 + MER96B DNA MER1_type? 37 219 -198 2353 94 0 0 chr20 68868780 68869079 -3284803 - AluSg SINE Alu -11 299 1 254 286 60 12 chr20 68869111 68869195 -3284687 + MLT1K LTR MaLR 311 398 -190 836 292 37 25 chr20 68869493 68869815 -3284067 - MLT1K LTR MaLR -5 583 258 * 913 151 9 101 chr20 68869800 68869909 -3283973 - MER96B DNA MER1_type? -214 203 122 2371 97 0 3 chr20 68869909 68870209 -3283673 + AluSx SINE Alu 1 299 -13 913 151 9 101 chr20 68870209 68870318 -3283564 - MER96B DNA MER1_type? -295 122 5 1494 226 66 42 chr20 68870389 68870845 -3283037 + MLT1C LTR MaLR 1 467 0 221 204 41 0 chr20 68871591 68871640 -3282242 + L2 LINE L2 3221 3271 -1 295 329 58 58 chr20 68873907 68874199 -3279683 - L2 LINE L2 -96 3217 2926 287 151 0 38 chr20 68874421 68874474 -3279408 - FRAM/FAM SINE Alu -124 51 1 1657 145 14 35 chr20 68874754 68875089 -3278793 - AluJo SINE Alu 0 329 1 334 324 21 14 chr20 68875548 68875690 -3278192 - LTR67 LTR ERVL 0 557 415 679 154 23 29 chr20 68876028 68876203 -3277679 + GA-rich Low_complexity Low_complexity 4 177 0 242 213 0 27 chr20 68876190 68876265 -3277617 + G-rich Low_complexity Low_complexity 1 73 0 * 2366 78 0 0 chr20 68877390 68877684 -3276198 - AluSg SINE Alu -16 294 1 1842 163 0 7 chr20 68877901 68878195 -3275687 - AluSx SINE Alu -20 292 1 2344 116 0 0 chr20 68878571 68878881 -3275001 - AluSx SINE Alu -2 310 1 498 304 63 33 chr20 68878886 68879132 -3274750 + L1ME4a LINE L1 5557 5815 -306 3991 178 17 11 chr20 68879132 68879880 -3274002 + L1MB5 LINE L1 5413 6165 -9 498 304 63 33 chr20 68879880 68879936 -3273946 + L1ME4a LINE L1 5815 5868 -253 2456 18 4 0 chr20 68879967 68880239 -3273643 + L1PA4 LINE L1 5880 6152 -3 303 258 14 74 chr20 68880306 68880523 -3273359 + L1ME4a LINE L1 5917 6120 -1 207 271 0 0 chr20 68881359 68881407 -3272475 - L2 LINE L2 0 3313 3266 436 308 64 23 chr20 68881635 68881807 -3272075 - MIR SINE MIR -1 261 83 670 229 35 30 chr20 68882535 68882736 -3271146 - MER113 DNA MER1_type? -319 202 1 29 28 0 0 chr20 68882758 68882794 -3271088 + AT_rich Low_complexity Low_complexity 1 36 0 1006 164 6 6 chr20 68883056 68883221 -3270661 + AluJb SINE Alu 137 301 -11 358 99 12 148 chr20 68883274 68883355 -3270527 + AluJ/FRAM SINE Alu 220 289 -13 2257 98 0 3 chr20 68883365 68883651 -3270231 + AluSc SINE Alu 13 297 -12 1190 214 14 0 chr20 68885309 68885529 -3268353 + MER58A DNA MER1_type 2 224 0 198 333 0 0 chr20 68886659 68886713 -3267169 + MIR SINE MIR 83 136 -72 345 328 111 55 chr20 68886841 68886901 -3266981 - L3 LINE CR1 -742 835 780 2335 116 0 0 chr20 68886901 68887211 -3266671 - AluSx SINE Alu -2 310 1 345 328 111 55 chr20 68887211 68887421 -3266461 - L3 LINE CR1 -797 780 550 3074 166 68 0 chr20 68888346 68888889 -3264993 - L1MB5 LINE L1 -8 6166 5587 650 168 63 0 chr20 68888898 68889041 -3264841 - L1MB5 LINE L1 -816 5330 5179 618 269 44 9 chr20 68889073 68889291 -3264591 - L1ME1 LINE L1 -5 6161 5931 1963 156 0 0 chr20 68889695 68889997 -3263885 + AluJb SINE Alu 1 302 -10 224 372 66 8 chr20 68890509 68890630 -3263252 + L2 LINE L2 3121 3248 -24 262 264 66 0 chr20 68890874 68890965 -3262917 + L1MC4 LINE L1 7634 7730 -312 1168 192 78 26 chr20 68891038 68891337 -3262545 + L1MC4 LINE L1 7665 8040 -2 613 134 113 0 chr20 68891787 68891884 -3261998 + FLAM_C SINE Alu 2 109 -34 599 290 79 9 chr20 68892029 68892243 -3261639 - MIR SINE MIR 0 262 34 238 313 0 0 chr20 68892259 68892323 -3261559 + MIR SINE MIR 199 262 0 569 197 120 16 chr20 68892380 68892626 -3261256 + MER33 DNA MER1_type 1 326 -37 250 346 155 32 chr20 68893305 68893840 -3260042 + L2 LINE L2 2303 2903 -411 249 263 0 0 chr20 68894088 68894145 -3259737 + L2 LINE L2 3256 3312 -1 207 0 0 0 chr20 68894380 68894403 -3259479 + (TTA)n Simple_repeat Simple_repeat 2 24 0 2384 97 3 0 chr20 68894537 68894848 -3259034 - AluSx SINE Alu 0 312 1 22 35 0 0 chr20 68895692 68895721 -3258161 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr20 68896422 68896443 -3257439 + AT_rich Low_complexity Low_complexity 1 21 0 6762 124 26 9 chr20 68896444 68897459 -3256423 - L1MC1 LINE L1 -5 6328 5294 2280 100 7 0 chr20 68897459 68897768 -3256114 - AluSq SINE Alu -2 311 1 6762 124 26 9 chr20 68897768 68897800 -3256082 - L1MC1 LINE L1 -1039 5294 5264 1670 166 7 3 chr20 68897811 68898101 -3255781 - L1MA7 LINE L1 0 6291 6001 4807 104 6 13 chr20 68898101 68898760 -3255122 - L1PA13 LINE L1 -8 6155 5498 1589 103 17 13 chr20 68898101 68898325 -3255557 - L1PA13 LINE L1 -10 6153 5926 2187 109 7 0 chr20 68898760 68899064 -3254818 - AluSx SINE Alu -6 306 1 4807 104 6 13 chr20 68899064 68899093 -3254789 - L1PA13 LINE L1 -665 5498 5470 1181 172 13 0 chr20 68899098 68899325 -3254557 - L1 LINE L1 -1752 4394 4165 994 196 20 80 chr20 68899386 68899738 -3254144 - L1MC1 LINE L1 -870 5276 4946 * 4479 132 11 42 chr20 68899721 68900523 -3253359 - L1MCa LINE L1 -5076 1350 574 3122 144 76 9 chr20 68900554 68901118 -3252764 - L1MCa LINE L1 -5783 643 42 667 272 43 0 chr20 68901273 68901457 -3252425 + MIR SINE MIR 33 224 -38 342 241 141 35 chr20 68901531 68901701 -3252181 - L2 LINE L2 -189 3083 2896 395 341 52 12 chr20 68901715 68901888 -3251994 - L2 LINE L2 -8 3305 3126 339 230 72 63 chr20 68902122 68902344 -3251538 + MER113 DNA MER1_type? 1 224 -297 256 237 110 25 chr20 68903049 68903167 -3250715 - LTR68 LTR ERV1 -606 134 7 264 273 26 0 chr20 68903299 68903376 -3250506 - MIR SINE MIR -68 140 62 820 223 30 0 chr20 68903388 68903554 -3250328 + MER20 DNA MER1_type 1 171 -48 236 339 78 31 chr20 68904947 68905139 -3248743 + L2 LINE L2 2812 3012 -260 522 261 131 77 chr20 68905142 68905532 -3248350 - MLT1J LTR MaLR -1 510 100 253 270 0 14 chr20 68905681 68905755 -3248127 - L1MC4a LINE L1 -1889 5919 5847 * 1000 236 48 29 chr20 68905750 68905842 -3248040 - L1MC4a LINE L1 -589 5575 5486 2030 125 0 3 chr20 68905842 68906147 -3247735 - AluSx SINE Alu -8 304 1 1000 236 48 29 chr20 68906147 68906495 -3247387 - L1MC4a LINE L1 -678 5486 5123 1897 223 60 5 chr20 68906524 68906960 -3246922 - MLT1C LTR MaLR 0 467 8 309 276 51 0 chr20 68907151 68907249 -3246633 - MLT1L LTR MaLR -20 595 493 542 320 51 27 chr20 68908289 68908547 -3245335 - MIR SINE MIR 0 262 2 874 256 50 4 chr20 68908691 68908953 -3244929 + L1MC4a LINE L1 5705 5978 -1830 302 219 58 0 chr20 68908968 68909123 -3244759 + (TA)n Simple_repeat Simple_repeat 1 164 0 790 325 80 55 chr20 68909183 68909710 -3244172 + L1MC4a LINE L1 6054 6593 -1215 1557 218 92 135 chr20 68909814 68910322 -3243560 + L1MC5 LINE L1 6625 7154 -807 1725 142 0 85 chr20 68910322 68910653 -3243229 + AluJb SINE Alu 1 303 -9 1557 218 92 135 chr20 68910653 68911333 -3242549 + L1MC5 LINE L1 7154 7761 -200 345 163 8 10 chr20 68912917 68913169 -3240713 + AluJo SINE Alu 10 302 0 421 259 93 21 chr20 68913303 68913468 -3240414 + L1MC5 LINE L1 7745 8038 -4 28 0 0 0 chr20 68913472 68913500 -3240382 + AT_rich Low_complexity Low_complexity 1 28 0 249 299 191 13 chr20 68913770 68913927 -3239955 + MIR SINE MIR 19 203 -59 1186 214 39 96 chr20 68913956 68914363 -3239519 + MLT1B LTR MaLR 1 384 -6 441 316 29 0 chr20 68914621 68914795 -3239087 + (CA)n Simple_repeat Simple_repeat 2 180 0 494 293 29 0 chr20 68914814 68914988 -3238894 + (CA)n Simple_repeat Simple_repeat 1 179 0 273 296 17 45 chr20 68914943 68915119 -3238763 + (CATATA)n Simple_repeat Simple_repeat 6 176 0 * 195 147 0 73 chr20 68915140 68915208 -3238674 + (CATA)n Simple_repeat Simple_repeat 4 66 0 294 176 78 0 chr20 68918862 68918913 -3234969 + MLT1K LTR MaLR 532 586 -2 1650 185 98 83 chr20 68919640 68920181 -3233701 + MLT1H LTR MaLR 1 549 0 215 269 34 67 chr20 68920693 68920812 -3233070 - MIR3 SINE MIR -7 201 87 678 323 57 8 chr20 68920835 68921083 -3232799 + MIR SINE MIR 3 262 0 277 330 19 10 chr20 68921325 68921440 -3232442 - MIR SINE MIR -64 144 38 706 300 78 45 chr20 68923165 68923611 -3230271 + MLT1L LTR MaLR 132 592 -23 272 248 233 31 chr20 68923649 68923778 -3230104 + MER5A DNA MER1_type 29 183 -6 193 274 164 0 chr20 68924634 68924707 -3229175 + MER5A DNA MER1_type 4 88 -101 1125 311 159 15 chr20 68924746 68925744 -3228138 + L2 LINE L2 1681 2822 -492 221 324 62 14 chr20 68925894 68926039 -3227843 + L2 LINE L2 3108 3259 -54 337 264 103 19 chr20 68926493 68926648 -3227234 - L1ME2 LINE L1 0 6164 5997 389 234 45 9 chr20 68926662 68926773 -3227109 - L2 LINE L2 -247 3066 2952 2214 85 0 19 chr20 68927011 68927327 -3226555 - AluSx SINE Alu -2 310 1 370 281 117 0 chr20 68927327 68927484 -3226398 - L1MD3 LINE L1 -17 7978 6134 1025 219 134 57 chr20 68927512 68927608 -3226274 - L1MD2 LINE L1 -199 6160 6073 2063 94 14 0 chr20 68927608 68927908 -3225974 + AluSx SINE Alu 1 304 0 1025 219 134 57 chr20 68927908 68928198 -3225684 - L1MD2 LINE L1 -286 6073 5743 323 301 154 0 chr20 68928310 68928446 -3225436 + MIR SINE MIR 106 262 0 390 285 125 5 chr20 68929087 68929287 -3224595 + MIR SINE MIR 28 251 -11 321 299 80 63 chr20 68930177 68930666 -3223216 - L1ME4a LINE L1 -1 6120 5624 491 289 103 25 chr20 68930671 68930945 -3222937 - L1ME4a LINE L1 -705 5466 5296 192 364 13 0 chr20 68932157 68932234 -3221648 - MIR3 SINE MIR -32 176 99 340 218 103 0 chr20 68932794 68932881 -3221001 + L2 LINE L2 3175 3270 -2 691 267 19 6 chr20 68933209 68933370 -3220512 + MIR SINE MIR 25 187 -75 276 326 61 0 chr20 68933499 68933597 -3220285 - MIR SINE MIR -74 188 85 731 194 13 39 chr20 68933607 68933762 -3220120 - MLT1E2 LTR MaLR -10 616 466 751 174 14 7 chr20 68933762 68933900 -3219982 + FLAM_C SINE Alu 1 139 -4 2330 69 0 0 chr20 68933907 68934197 -3219685 + AluY SINE Alu 1 290 -21 288 243 57 14 chr20 68934199 68934245 -3219637 + AluSp SINE Alu 127 175 -128 540 68 81 0 chr20 68934245 68934319 -3219563 + MADE1 DNA Mariner 1 80 0 828 134 0 0 chr20 68934319 68934438 -3219444 + FRAM SINE Alu 35 153 -23 1435 205 29 58 chr20 68934438 68934848 -3219034 - MLT1E2 LTR MaLR -153 473 76 437 299 13 7 chr20 68934731 68934885 -3218997 - MLT2C1 LTR ERVL -199 198 44 * 1444 273 80 18 chr20 68935195 68935646 -3218236 + MLT1J LTR MaLR 3 481 -30 975 287 127 19 chr20 68936968 68937337 -3216545 + MLT1I LTR MaLR 1 409 0 922 190 83 5 chr20 68937552 68937757 -3216125 - L1MD2 LINE L1 -396 5963 5743 22 0 0 0 chr20 68937817 68937839 -3216043 + AT_rich Low_complexity Low_complexity 1 22 0 1637 207 82 25 chr20 68938037 68938597 -3215285 + HsTC2 DNA Tc2 1307 1898 0 996 176 64 35 chr20 68938932 68938952 -3214930 - L1M3 LINE L1 -576 5607 5589 606 180 9 0 chr20 68938952 68939063 -3214819 - L1MD2 LINE L1 -17 6342 6231 996 176 64 35 chr20 68939063 68939336 -3214546 - L1M3 LINE L1 -594 5589 5325 2071 124 10 0 chr20 68939336 68939634 -3214248 - AluSx SINE Alu -11 301 1 996 176 64 35 chr20 68939634 68940162 -3213720 - L1M3 LINE L1 -858 5325 4640 21 57 0 0 chr20 68940261 68940296 -3213586 + AT_rich Low_complexity Low_complexity 1 35 0 341 281 52 14 chr20 68940913 68941167 -3212715 - MER113 DNA MER1_type? -1 520 215 268 238 10 109 chr20 68941279 68941329 -3212553 + L2 LINE L2 3136 3173 -99 1739 151 3 13 chr20 68941329 68941633 -3212249 - AluJo SINE Alu -11 301 1 268 238 10 109 chr20 68941633 68941683 -3212199 + L2 LINE L2 3173 3226 -46 948 209 33 24 chr20 68942782 68942992 -3210890 - MER20 DNA MER1_type -2 217 6 682 184 29 0 chr20 68943795 68943931 -3209951 + MER103 DNA DNA 20 159 -7 184 246 35 0 chr20 68944861 68944918 -3208964 - L2 LINE L2 -1925 1389 1331 534 281 40 40 chr20 68945110 68945338 -3208544 + L2 LINE L2 3082 3309 -4 993 183 0 0 chr20 68945775 68945959 -3207923 - AluSg/x SINE Alu 0 302 119 615 27 0 0 chr20 68946851 68946924 -3206958 + (GAAA)n Simple_repeat Simple_repeat 4 76 0 13321 105 9 11 chr20 68947296 68950081 -3203801 - HERVH LTR ERV1 -4949 2764 1 2548 86 108 5 chr20 68950083 68950489 -3203393 - LTR7 LTR ERV1 -2 448 1 5385 52 1 6 chr20 68950811 68951500 -3202382 + L1PA5 LINE L1 5469 6154 0 1846 106 86 24 chr20 68951526 68951818 -3202064 + AluSg SINE Alu 1 310 0 1259 201 76 40 chr20 68951974 68952278 -3201604 - MER61A LTR ERV1 -28 315 1 25 0 0 0 chr20 68952402 68952427 -3201455 + AT_rich Low_complexity Low_complexity 1 25 0 24 0 0 0 chr20 68953272 68953296 -3200586 + AT_rich Low_complexity Low_complexity 1 24 0 27 0 0 0 chr20 68954220 68954247 -3199635 + AT_rich Low_complexity Low_complexity 1 27 0 463 56 14 14 chr20 68954416 68954488 -3199394 + (TAGA)n Simple_repeat Simple_repeat 3 74 0 195 409 24 16 chr20 68954518 68954645 -3199237 + L2 LINE L2 2927 3054 -218 24 53 0 0 chr20 68955872 68955910 -3197972 + AT_rich Low_complexity Low_complexity 1 38 0 497 292 31 21 chr20 68958164 68958356 -3195526 + MIR SINE MIR 37 230 -32 195 42 0 0 chr20 68959623 68959647 -3194235 + (TG)n Simple_repeat Simple_repeat 2 25 0 500 116 42 0 chr20 68959693 68959788 -3194094 + L1MA9 LINE L1 6214 6312 0 535 15 0 0 chr20 68960717 68960785 -3193097 - L1PA3 LINE L1 0 6155 6088 6829 65 7 2 chr20 68960786 68961816 -3192066 + L1PA7 LINE L1 5118 6154 0 26 30 0 0 chr20 68961959 68961992 -3191890 + AT_rich Low_complexity Low_complexity 1 33 0 198 222 0 22 chr20 68962501 68962546 -3191336 - L2 LINE L2 -16 3256 3213 198 222 0 22 chr20 68963314 68963359 -3190523 - L2 LINE L2 -16 3256 3213 233 381 32 16 chr20 68963373 68963499 -3190383 - MIR SINE MIR -120 142 15 24 0 0 0 chr20 68963951 68963975 -3189907 + AT_rich Low_complexity Low_complexity 1 24 0 2064 132 36 36 chr20 68964148 68964512 -3189370 + THE1B LTR MaLR 1 364 0 190 250 0 21 chr20 68964850 68964898 -3188984 + L2 LINE L2 2927 2973 -341 757 265 76 17 chr20 68965016 68965254 -3188628 - MIR SINE MIR -10 252 1 276 366 45 0 chr20 68965257 68965369 -3188513 + L2 LINE L2 3196 3312 -1 37 86 0 0 chr20 68965999 68966092 -3187790 + AT_rich Low_complexity Low_complexity 1 93 0 2207 90 0 27 chr20 68968310 68968611 -3185271 + AluSp SINE Alu 5 297 -16 314 322 63 54 chr20 68968612 68968929 -3184953 - HAL1b LINE L1 -916 432 113 538 215 24 77 chr20 68969700 68969910 -3183972 - MLT1H LTR MaLR -1 549 356 29 47 0 0 chr20 68970230 68970273 -3183609 + AT_rich Low_complexity Low_complexity 1 43 0 23 33 0 0 chr20 68970464 68970494 -3183388 + AT_rich Low_complexity Low_complexity 1 30 0 810 188 13 2 chr20 68970552 68970718 -3183164 - L1P2 LINE L1 -623 5531 5367 252 171 200 14 chr20 68970718 68970788 -3183094 + MSTC LTR MaLR 1 83 -345 1061 83 70 0 chr20 68970788 68970944 -3182938 + L1MA2 LINE L1 5892 6058 -246 559 296 71 50 chr20 68970944 68971184 -3182698 - MER45C DNA AcHobo -621 332 88 3861 188 11 7 chr20 68971594 68972891 -3180991 - L1MA4A LINE L1 -467 6538 5234 1347 162 24 4 chr20 68972943 68973190 -3180692 - L1PA15 LINE L1 -4 6161 5910 1895 332 28 16 chr20 68973199 68973948 -3179934 - L1PA13 LINE L1 -6029 758 1 5491 196 27 25 chr20 68973955 68974988 -3178894 - L1MA4A LINE L1 -1603 5245 4207 1425 206 35 3 chr20 68974988 68975275 -3178607 - AluJb SINE Alu -16 296 1 5491 196 27 25 chr20 68975275 68975483 -3178399 - L1MA4A LINE L1 -2641 4207 4001 3734 143 14 60 chr20 68975502 68976046 -3177836 - L1PA16 LINE L1 -21 6145 5578 1862 109 41 0 chr20 68976046 68976313 -3177569 + AluSp SINE Alu 11 288 -25 3734 143 14 60 chr20 68976313 68976332 -3177550 - L1PA16 LINE L1 -588 5578 5560 243 0 0 0 chr20 68976332 68976359 -3177523 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 3734 143 14 60 chr20 68976359 68976496 -3177386 - L1PA16 LINE L1 -606 5560 5476 * 4264 218 44 40 chr20 68976475 68976872 -3177010 - L1MA4A LINE L1 -2820 4028 3634 2515 154 21 5 chr20 68976872 68977293 -3176589 - MSTA LTR MaLR 0 428 1 7441 202 47 9 chr20 68977293 68978884 -3174998 - MSTA-int LTR MaLR 0 1651 2 2242 162 67 0 chr20 68978885 68979091 -3174791 - MSTA LTR MaLR 0 428 237 186 43 0 0 chr20 68979091 68979114 -3174768 + (GGGA)n Simple_repeat Simple_repeat 3 25 0 2242 162 67 0 chr20 68979114 68979308 -3174574 - MSTA LTR MaLR -191 237 1 4264 218 44 40 chr20 68979308 68981024 -3172858 - L1MA4A LINE L1 -3214 3634 1898 1519 183 37 0 chr20 68981024 68981297 -3172585 - AluSx SINE Alu -5 307 25 4264 218 44 40 chr20 68981297 68981414 -3172468 - L1MA4A LINE L1 -4950 1898 1783 6299 252 60 20 chr20 68981434 68983059 -3170823 - L1MA4A LINE L1 -5159 1690 1 240 35 0 0 chr20 68983170 68983199 -3170683 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 254 356 145 34 chr20 68983279 68983922 -3169960 - L2 LINE L2 -619 2695 1982 804 288 106 27 chr20 68984415 68984821 -3169061 - LTR16A LTR ERVL 0 450 13 22 0 0 0 chr20 68985694 68985716 -3168166 + AT_rich Low_complexity Low_complexity 1 22 0 1233 321 98 25 chr20 68985914 68986659 -3167223 + L1MEc LINE L1 42 840 -5556 244 326 70 43 chr20 68986668 68986898 -3166984 - MIR SINE MIR -14 248 13 2949 104 22 4 chr20 68987579 68988029 -3165853 - L1PA13 LINE L1 -1 6162 5705 6073 202 178 16 chr20 68988042 68989552 -3164330 + MER52A LTR ERV1 1 1755 0 24 0 0 0 chr20 68992206 68992230 -3161652 + AT_rich Low_complexity Low_complexity 1 24 0 8612 227 80 20 chr20 68992867 68995081 -3158801 - L1MC3 LINE L1 -1 8202 5818 1465 143 100 8 chr20 68995081 68995410 -3158472 - AluSx SINE Alu 0 353 1 8612 227 80 20 chr20 68995410 68995700 -3158182 - L1MC3 LINE L1 -2385 5818 5547 2101 283 92 17 chr20 68995711 68997695 -3156187 - L1MC3 LINE L1 -3898 2847 546 407 283 60 105 chr20 68997799 68998114 -3155768 - L1MC3 LINE L1 -5491 554 254 8353 52 0 0 chr20 68998743 68999803 -3154079 - L1PA5 LINE L1 -1242 4904 3845 7292 50 0 0 chr20 68999804 69001035 -3152847 + L1PA5 LINE L1 4924 6153 -1 540 65 0 43 chr20 69001169 69001262 -3152620 + (TTTTC)n Simple_repeat Simple_repeat 1 89 0 233 257 106 98 chr20 69001734 69001884 -3151998 - LTR33 LTR ERVL -250 271 117 1276 216 64 17 chr20 69001884 69002181 -3151701 + AluJo SINE Alu 1 311 -1 233 257 106 98 chr20 69002181 69002295 -3151587 - LTR33 LTR ERVL -404 117 5 318 157 59 10 chr20 69002982 69003084 -3150798 + (TA)n Simple_repeat Simple_repeat 1 107 0 42 0 0 0 chr20 69003523 69003565 -3150317 + AT_rich Low_complexity Low_complexity 1 42 0 2651 13 0 0 chr20 69003595 69003899 -3149983 - L1PA2 LINE L1 0 6155 5852 3495 127 60 2 chr20 69003985 69004585 -3149297 - LTR24C LTR ERV1 0 635 1 219 36 0 0 chr20 69005172 69005200 -3148682 + (TAAA)n Simple_repeat Simple_repeat 1 28 0 800 156 15 7 chr20 69005584 69005719 -3148163 + AluJo SINE Alu 1 136 -176 34 0 0 0 chr20 69005752 69005786 -3148096 + AT_rich Low_complexity Low_complexity 1 34 0 259 212 94 93 chr20 69006472 69006592 -3147290 - MIR SINE MIR -63 145 64 22 0 0 0 chr20 69007235 69007257 -3146625 + AT_rich Low_complexity Low_complexity 1 22 0 350 314 87 37 chr20 69007334 69007576 -3146306 + L1MC/D LINE L1 5295 5548 -2260 1548 216 0 13 chr20 69007576 69007881 -3146001 + AluJo SINE Alu 1 301 -11 783 176 74 0 chr20 69007881 69008029 -3145853 + AluJo SINE Alu 134 292 -20 457 102 70 0 chr20 69008110 69008267 -3145615 + (TA)n Simple_repeat Simple_repeat 1 168 0 23 0 0 0 chr20 69008267 69008290 -3145592 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr20 69008681 69008704 -3145178 + AT_rich Low_complexity Low_complexity 1 23 0 21 57 0 0 chr20 69008898 69008933 -3144949 + AT_rich Low_complexity Low_complexity 1 35 0 221 0 0 33 chr20 69009692 69009722 -3144160 + (CACTC)n Simple_repeat Simple_repeat 3 31 0 22 0 0 0 chr20 69010333 69010355 -3143527 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr20 69010518 69010539 -3143343 + AT_rich Low_complexity Low_complexity 1 21 0 13231 188 34 9 chr20 69010816 69013467 -3140415 - Tigger2 DNA MER2_type 0 2718 2 22 0 0 0 chr20 69013775 69013797 -3140085 + AT_rich Low_complexity Low_complexity 1 22 0 752 241 18 64 chr20 69014842 69015014 -3138868 + MIR SINE MIR 32 193 -69 2308 90 10 0 chr20 69015014 69015313 -3138569 - AluSc SINE Alu -7 302 1 752 241 18 64 chr20 69015313 69015360 -3138522 + MIR SINE MIR 193 241 -21 222 259 17 0 chr20 69016233 69016291 -3137591 + (CATATA)n Simple_repeat Simple_repeat 6 64 0 3666 205 80 40 chr20 69016296 69017335 -3136547 - Tigger6a DNA MER2_type -1 1082 2 731 216 66 19 chr20 69017551 69017764 -3136118 + MER58 DNA MER1_type 62 284 -57 200 170 38 19 chr20 69017808 69017861 -3136021 + (TATG)n Simple_repeat Simple_repeat 3 56 0 25 0 0 0 chr20 69018145 69018170 -3135712 + AT_rich Low_complexity Low_complexity 1 25 0 198 0 0 0 chr20 69018205 69018227 -3135655 + (T)n Simple_repeat Simple_repeat 1 22 0 1939 213 90 68 chr20 69018228 69018291 -3135591 - MLT1E3 LTR MaLR -6 618 558 2364 100 0 0 chr20 69018291 69018602 -3135280 + AluSx SINE Alu 1 311 -1 1939 213 90 68 chr20 69018602 69019138 -3134744 - MLT1E3 LTR MaLR -66 558 6 21 0 0 0 chr20 69020476 69020497 -3133385 + AT_rich Low_complexity Low_complexity 1 21 0 34 32 0 32 chr20 69020786 69020817 -3133065 + AT_rich Low_complexity Low_complexity 1 31 -30 775 178 0 0 chr20 69020817 69020935 -3132947 + FLAM_C SINE Alu 1 118 -15 34 32 0 32 chr20 69020935 69020966 -3132916 + AT_rich Low_complexity Low_complexity 31 61 0 2592 98 8 16 chr20 69021069 69021445 -3132437 + THE1C LTR MaLR 1 373 -2 24 0 0 0 chr20 69022516 69022540 -3131342 + AT_rich Low_complexity Low_complexity 1 24 0 1702 236 68 64 chr20 69022891 69023543 -3130339 - MLT1E1 LTR MaLR 0 654 1 343 322 104 20 chr20 69023900 69024102 -3129780 + LTR33 LTR ERVL 4 222 -299 2090 129 0 0 chr20 69024959 69025253 -3128629 + AluSx SINE Alu 1 294 -18 879 208 11 0 chr20 69025284 69025462 -3128420 + FRAM SINE Alu 1 172 -4 233 378 49 0 chr20 69026114 69026196 -3127686 - L2 LINE L2 -32 3240 3155 21 36 0 0 chr20 69026722 69026750 -3127132 + AT_rich Low_complexity Low_complexity 1 28 0 352 309 133 6 chr20 69027237 69027418 -3126464 + MIR SINE MIR 53 256 -6 825 263 0 0 chr20 69028251 69028437 -3125445 - MLT1A1 LTR MaLR -179 186 1 227 103 26 0 chr20 69028619 69028658 -3125224 + (TA)n Simple_repeat Simple_repeat 1 40 0 42 71 0 0 chr20 69028686 69028770 -3125112 + AT_rich Low_complexity Low_complexity 1 84 0 221 226 0 0 chr20 69029433 69029486 -3124396 + (TG)n Simple_repeat Simple_repeat 2 54 0 1007 272 50 6 chr20 69029987 69030325 -3123557 - MER113 DNA MER1_type? -9 512 160 197 0 71 0 chr20 69030468 69030496 -3123386 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 2068 132 14 0 chr20 69031974 69032270 -3121612 - AluSx SINE Alu -12 300 1 573 346 20 8 chr20 69032277 69032531 -3121351 + L1ME2 LINE L1 36 292 -6104 1987 175 39 5 chr20 69032953 69033618 -3120264 + MER50 LTR ERV1 1 710 -24 10170 149 53 31 chr20 69033620 69035430 -3118452 + MER50-int LTR ERV1 1 1850 -5355 2840 175 8 10 chr20 69035461 69035941 -3117941 + MER83B-int LTR ERV1 1003 1481 -3399 225 114 136 0 chr20 69035957 69036001 -3117881 - L1PA13 LINE L1 -6446 341 292 2300 160 64 34 chr20 69036001 69036667 -3117215 + MER83B-int LTR ERV1 3434 4076 -804 1345 167 4 4 chr20 69036673 69036901 -3116981 + MER50 LTR ERV1 478 705 -29 764 239 128 0 chr20 69036920 69037225 -3116657 + L1M4 LINE L1 2726 3069 -3077 598 167 42 35 chr20 69037238 69037382 -3116500 + MER83B-int LTR ERV1 4017 4161 -3655 574 258 64 7 chr20 69037418 69037701 -3116181 + L1ME2 LINE L1 3153 3451 -2764 1293 268 63 6 chr20 69037742 69038219 -3115663 + L1ME2 LINE L1 5400 5903 -330 489 167 67 0 chr20 69038221 69038311 -3115571 + LTR8 LTR ERV1 1 96 -595 1233 202 61 72 chr20 69038311 69038687 -3115195 + LTR8A LTR ERV1 356 727 0 599 278 148 11 chr20 69038695 69038979 -3114903 + L1ME2 LINE L1 5910 6232 -1 630 221 33 0 chr20 69039212 69039334 -3114548 + Tigger5 DNA MER2_type 4 129 -2194 1736 172 6 16 chr20 69039346 69039666 -3114216 - Tigger3(Golem) DNA MER2_type -2711 318 2 200 200 0 0 chr20 69039885 69039920 -3113962 + (CATA)n Simple_repeat Simple_repeat 2 36 0 23 68 0 0 chr20 69040012 69040056 -3113826 + AT_rich Low_complexity Low_complexity 1 44 0 2006 159 40 38 chr20 69040407 69040964 -3112918 - MLT2A2 LTR ERVL 0 554 1 9277 126 4 4 chr20 69040966 69042321 -3111561 - HERVL-A2 LTR ERVL -2 5652 4299 1784 164 24 66 chr20 69042321 69042792 -3111090 - MLT2A2 LTR ERVL -99 455 1 979 125 17 23 chr20 69042812 69042988 -3110894 + MER30 DNA MER1_type 1 175 -55 30 27 0 0 chr20 69043174 69043211 -3110671 + AT_rich Low_complexity Low_complexity 1 37 0 22 0 0 0 chr20 69043241 69043263 -3110619 + AT_rich Low_complexity Low_complexity 1 22 0 2740 192 72 33 chr20 69043426 69043624 -3110258 - MER67C LTR ERV1 0 710 521 2309 97 0 3 chr20 69043624 69043932 -3109950 - AluY SINE Alu -4 307 1 2740 192 72 33 chr20 69043932 69044404 -3109478 - MER67C LTR ERV1 -189 521 14 2594 83 106 5 chr20 69045006 69045413 -3108469 - LTR7 LTR ERV1 -2 448 1 2429 95 48 13 chr20 69045413 69045792 -3108090 - HERVH LTR ERV1 0 7713 7322 1370 122 17 38 chr20 69045790 69046027 -3107855 - HERVH LTR ERV1 -1894 5819 5588 * 7575 135 17 5 chr20 69046007 69047665 -3106217 - HERVH LTR ERV1 -1805 5286 3539 557 140 0 32 chr20 69048783 69048865 -3105017 - ORSL DNA AcHobo 0 275 195 1801 10 0 15 chr20 69048865 69049069 -3104813 - AluYb8 SINE Alu -15 303 103 2317 110 3 0 chr20 69049097 69049407 -3104475 - AluSx SINE Alu -1 311 1 302 47 0 0 chr20 69049407 69049450 -3104432 - ORSL DNA AcHobo -69 206 164 270 207 0 0 chr20 69049493 69049551 -3104331 + MIR SINE MIR 81 138 -70 292 257 27 0 chr20 69050047 69050121 -3103761 + L1MC/D LINE L1 5574 5649 -2159 271 292 29 88 chr20 69051476 69051565 -3102317 - L2 LINE L2 -2 3270 3190 2014 99 51 0 chr20 69051565 69051857 -3102025 + AluSx SINE Alu 1 307 -5 271 292 29 88 chr20 69051857 69051904 -3101978 - L2 LINE L2 -82 3190 3142 346 170 57 13 chr20 69052883 69053042 -3100840 + GA-rich Low_complexity Low_complexity 1 166 0 208 306 0 49 chr20 69053644 69053788 -3100094 + G-rich Low_complexity Low_complexity 5 141 0 300 296 0 50 chr20 69053872 69054084 -3099798 + G-rich Low_complexity Low_complexity 1 201 0 4172 182 39 27 chr20 69055346 69056236 -3097646 - L1MC3 LINE L1 -709 7076 6176 687 243 58 34 chr20 69056891 69057097 -3096785 + MIR SINE MIR 32 242 -20 737 154 3 25 chr20 69057122 69057491 -3096391 + (ATG)n Simple_repeat Simple_repeat 1 360 0 899 273 22 115 chr20 69057645 69058089 -3095793 - LTR16A1 LTR ERVL 0 457 55 273 338 0 0 chr20 69058555 69058635 -3095247 + MIR3 SINE MIR 118 197 -11 252 222 0 32 chr20 69059506 69059569 -3094313 + MIR SINE MIR 116 176 -86 289 169 11 11 chr20 69059661 69059750 -3094132 + (TCCA)n Simple_repeat Simple_repeat 2 90 0 182 329 25 25 chr20 69059750 69059829 -3094053 - L2 LINE L2 0 3272 3194 1565 181 7 7 chr20 69060114 69060401 -3093481 + AluJo SINE Alu 18 304 -8 529 283 102 0 chr20 69061039 69061216 -3092666 + Charlie8 DNA MER1_type 75 269 -2148 204 125 0 0 chr20 69061253 69061285 -3092597 + (AGGGGG)n Simple_repeat Simple_repeat 3 34 0 240 329 88 24 chr20 69062713 69062883 -3090999 + MIR SINE MIR 17 197 -65 674 181 25 19 chr20 69063264 69063754 -3090128 + CT-rich Low_complexity Low_complexity 1 492 0 346 170 57 13 chr20 69063781 69063940 -3089942 + CT-rich Low_complexity Low_complexity 1 166 0 271 292 29 88 chr20 69064919 69064966 -3088916 + L2 LINE L2 3142 3190 -82 2014 99 51 0 chr20 69064966 69065258 -3088624 - AluSx SINE Alu -5 307 1 271 292 29 88 chr20 69065258 69065347 -3088535 + L2 LINE L2 3190 3270 -2 292 257 27 0 chr20 69066702 69066776 -3087106 - L1MC3 LINE L1 -2159 5649 5574 221 316 209 0 chr20 69066891 69067030 -3086852 + MIR SINE MIR 15 182 -80 345 200 0 0 chr20 69067269 69067334 -3086548 - MIR SINE MIR -69 139 75 246 300 91 9 chr20 69067412 69067522 -3086360 + MIR SINE MIR 29 147 -115 426 226 10 10 chr20 69068757 69068859 -3085023 - L1MC3 LINE L1 -10 7775 7674 330 238 133 0 chr20 69068860 69068965 -3084917 - MIR SINE MIR -96 166 48 215 360 32 8 chr20 69069574 69069699 -3084183 - MIR SINE MIR -3 259 132 766 258 45 0 chr20 69069708 69069929 -3083953 - L1MD2 LINE L1 -16 6343 6113 302 247 0 39 chr20 69069930 69070007 -3083875 - MIR SINE MIR -108 154 81 366 23 0 0 chr20 69070241 69070284 -3083598 + (TG)n Simple_repeat Simple_repeat 2 44 0 2027 142 10 0 chr20 69071711 69072020 -3081862 + AluSx SINE Alu 1 312 0 277 350 125 6 chr20 69072039 69072457 -3081425 + L2 LINE L2 2732 3205 -108 216 208 65 91 chr20 69072597 69072674 -3081208 - MIR SINE MIR -63 145 71 249 277 53 11 chr20 69074244 69074338 -3079544 - MIR SINE MIR -44 218 121 258 260 82 0 chr20 69074442 69074515 -3079367 - L2 LINE L2 -3 3310 3232 191 341 111 8 chr20 69074795 69074921 -3078961 + L2 LINE L2 3175 3313 0 366 272 7 10 chr20 69074921 69075208 -3078674 + (TGGA)n Simple_repeat Simple_repeat 1 286 0 1205 294 46 16 chr20 69075219 69075665 -3078217 - LTR16A LTR ERVL 0 457 2 500 341 66 4 chr20 69075718 69075976 -3077906 - HERVL LTR ERVL -1102 4552 4279 2554 327 45 50 chr20 69076095 69077791 -3076091 - HERVL LTR ERVL -1281 4204 2518 620 277 90 77 chr20 69078526 69078916 -3074966 - L2 LINE L2 -52 3261 2867 188 328 59 25 chr20 69081560 69081679 -3072203 + MIR SINE MIR 60 182 -80 688 181 7 51 chr20 69081764 69081902 -3071980 + FLAM_C SINE Alu 1 132 -1 1075 215 36 64 chr20 69082548 69082898 -3070984 - L1ME2 LINE L1 -10 6154 5818 301 148 79 10 chr20 69082916 69083017 -3070865 + CT-rich Low_complexity Low_complexity 3 110 0 1681 185 10 16 chr20 69083034 69083348 -3070534 - AluJo SINE Alu 0 312 1 1124 262 90 3 chr20 69083353 69083720 -3070162 - L1ME2 LINE L1 -343 5821 5423 202 225 0 0 chr20 69084558 69084598 -3069284 + (ATG)n Simple_repeat Simple_repeat 3 42 0 245 299 205 24 chr20 69085158 69085285 -3068597 - MIR SINE MIR -112 150 1 237 351 40 30 chr20 69085501 69085703 -3068179 - L1MC4a LINE L1 -1872 5936 5733 561 341 97 13 chr20 69085724 69086035 -3067847 - L1MC4a LINE L1 -2144 5664 5328 220 351 72 0 chr20 69086130 69086241 -3067641 + MIR3 SINE MIR 41 159 -49 * 282 332 75 55 chr20 69086220 69086473 -3067409 + L3b LINE CR1 1227 1484 -99 339 345 22 22 chr20 69087323 69087462 -3066420 - L2 LINE L2 -9 3263 3125 195 315 19 0 chr20 69088398 69088452 -3065430 - L2 LINE L2 -19 3294 3240 254 314 19 0 chr20 69088647 69088752 -3065130 - MER113 DNA MER1_type? -414 107 1 235 336 57 41 chr20 69089116 69089238 -3064644 + MIR SINE MIR 23 146 -62 192 158 0 0 chr20 69089964 69090002 -3063880 + (TA)n Simple_repeat Simple_repeat 1 38 0 183 309 12 25 chr20 69091108 69091189 -3062693 + MER5A DNA MER1_type 3 82 -107 475 278 8 28 chr20 69091656 69091981 -3061901 + G-rich Low_complexity Low_complexity 1 318 0 420 294 6 11 chr20 69091904 69092084 -3061798 + GA-rich Low_complexity Low_complexity 1 179 0 * 534 316 5 19 chr20 69092106 69092510 -3061372 + G-rich Low_complexity Low_complexity 1 398 0 403 288 9 35 chr20 69092483 69092762 -3061120 + GA-rich Low_complexity Low_complexity 1 271 0 * 379 326 11 6 chr20 69092778 69092953 -3060929 + G-rich Low_complexity Low_complexity 3 178 0 194 128 26 0 chr20 69092971 69093010 -3060872 + GA-rich Low_complexity Low_complexity 3 42 0 275 200 147 32 chr20 69094247 69094342 -3059540 + MER113 DNA MER1_type? 221 326 -195 1248 126 27 31 chr20 69095408 69095630 -3058252 + AluJo SINE Alu 86 306 -6 216 290 28 110 chr20 69096465 69096534 -3057348 + L2 LINE L2 2647 2699 -615 1758 161 3 20 chr20 69096534 69096838 -3057044 + AluJb SINE Alu 1 299 -13 216 290 28 110 chr20 69096838 69096913 -3056969 + L2 LINE L2 2699 2779 -535 1431 219 105 43 chr20 69096992 69097457 -3056425 - MLT1D LTR MaLR -6 499 6 546 321 130 7 chr20 69097471 69097770 -3056112 - LTR16C LTR ERVL 0 491 156 1100 270 116 13 chr20 69098702 69099150 -3054732 + MLT1K LTR MaLR 90 583 -5 338 262 81 13 chr20 69099154 69099303 -3054579 + MIR SINE MIR 98 256 -6 536 237 95 58 chr20 69099648 69100041 -3053841 - MLT1K LTR MaLR 0 588 143 342 257 83 9 chr20 69100177 69100286 -3053596 - MIR SINE MIR -97 165 49 764 189 15 6 chr20 69101027 69101369 -3052513 + (TCCA)n Simple_repeat Simple_repeat 1 345 0 314 129 48 0 chr20 69101749 69101811 -3052071 + MER53 DNA DNA 94 158 -31 330 218 9 118 chr20 69101873 69101983 -3051899 + MIR SINE MIR 63 160 -102 469 307 49 41 chr20 69103188 69103531 -3050351 - MLT1L LTR MaLR -224 391 3 211 274 44 82 chr20 69103563 69103698 -3050184 - MIR SINE MIR -12 250 121 191 161 23 58 chr20 69104442 69104529 -3049353 + (TCTCTG)n Simple_repeat Simple_repeat 1 84 0 304 325 139 40 chr20 69104529 69104904 -3048978 - HAL1 LINE L1 -1216 1291 880 234 0 0 0 chr20 69104935 69104961 -3048921 + (CA)n Simple_repeat Simple_repeat 1 26 0 211 267 0 0 chr20 69105055 69105100 -3048782 + (TG)n Simple_repeat Simple_repeat 1 45 0 212 214 18 0 chr20 69105557 69105613 -3048269 + (CA)n Simple_repeat Simple_repeat 2 58 0 249 83 0 0 chr20 69105768 69105804 -3048078 + (CA)n Simple_repeat Simple_repeat 1 36 0 314 23 23 0 chr20 69105995 69106038 -3047844 + (TG)n Simple_repeat Simple_repeat 2 45 0 240 111 0 0 chr20 69106432 69106468 -3047414 + (TC)n Simple_repeat Simple_repeat 1 36 0 261 0 0 0 chr20 69106568 69106597 -3047285 + (TG)n Simple_repeat Simple_repeat 2 30 0 274 221 44 0 chr20 69107047 69107115 -3046767 + (CA)n Simple_repeat Simple_repeat 2 72 0 339 25 0 0 chr20 69107833 69107873 -3046009 + (CA)n Simple_repeat Simple_repeat 2 41 0 285 29 0 0 chr20 69108054 69108088 -3045794 + (CA)n Simple_repeat Simple_repeat 2 35 0 423 0 0 0 chr20 69108385 69108432 -3045450 + (CA)n Simple_repeat Simple_repeat 1 47 0 192 152 0 0 chr20 69109107 69109140 -3044742 + (CA)n Simple_repeat Simple_repeat 2 34 0 245 182 0 0 chr20 69109329 69109384 -3044498 + (TG)n Simple_repeat Simple_repeat 2 56 0 390 21 0 0 chr20 69109475 69109522 -3044360 + (CA)n Simple_repeat Simple_repeat 2 48 0 270 0 0 0 chr20 69109865 69109895 -3043987 + (CA)n Simple_repeat Simple_repeat 1 30 0 194 160 20 0 chr20 69110237 69110287 -3043595 + CT-rich Low_complexity Low_complexity 2 52 0 353 100 0 17 chr20 69110287 69110347 -3043535 + (CA)n Simple_repeat Simple_repeat 1 59 0 213 175 0 0 chr20 69110488 69110528 -3043354 + CT-rich Low_complexity Low_complexity 3 42 0 204 135 0 0 chr20 69110710 69110747 -3043135 + (TC)n Simple_repeat Simple_repeat 2 38 0 21 0 0 0 chr20 69111737 69111758 -3042124 + GC_rich Low_complexity Low_complexity 1 21 0 402 283 72 18 chr20 69112115 69112281 -3041601 + MIR SINE MIR 21 195 -67 716 289 161 24 chr20 69112894 69113310 -3040572 - L2 LINE L2 -2 3311 2839 191 281 18 18 chr20 69115113 69115170 -3038712 - L2 LINE L2 -15 3257 3201 2264 108 3 0 chr20 69116283 69116579 -3037303 - AluSx SINE Alu -15 297 1 3329 114 85 0 chr20 69117044 69117528 -3036354 + MER1A DNA MER1_type 3 527 0 24 32 0 0 chr20 69117576 69117607 -3036275 + AT_rich Low_complexity Low_complexity 1 31 0 23 0 0 0 chr20 69117635 69117658 -3036224 + AT_rich Low_complexity Low_complexity 1 23 0 216 266 16 0 chr20 69117698 69117762 -3036120 + GA-rich Low_complexity Low_complexity 2 66 0 810 86 0 34 chr20 69117784 69117901 -3035981 + L1PA10 LINE L1 6056 6168 0 274 167 42 0 chr20 69118354 69118402 -3035480 - Charlie8 DNA MER1_type -2224 193 144 261 316 21 21 chr20 69119346 69119441 -3034441 - MIR SINE MIR -10 252 158 310 235 94 0 chr20 69119442 69119527 -3034355 + MER20 DNA MER1_type 34 126 -93 306 265 24 36 chr20 69119530 69119613 -3034269 - MIR SINE MIR -96 166 85 942 223 9 23 chr20 69121815 69122030 -3031852 + MER20 DNA MER1_type 1 212 -7 394 247 116 26 chr20 69122039 69122106 -3031776 - L1ME3 LINE L1 -22 6140 6080 2372 146 107 15 chr20 69122106 69122565 -3031317 - MLT1D LTR MaLR -4 501 1 394 247 116 26 chr20 69122565 69122687 -3031195 - L1ME3 LINE L1 -82 6080 5934 2492 149 33 35 chr20 69123730 69124176 -3029706 - L1MC2 LINE L1 -24 6320 5874 2282 119 10 0 chr20 69124176 69124479 -3029403 - AluSx SINE Alu -6 306 1 2492 149 33 35 chr20 69124479 69124523 -3029359 - L1MC2 LINE L1 -470 5874 5831 276 237 0 0 chr20 69126013 69126072 -3027810 - L2 LINE L2 -1 3271 3213 198 358 25 0 chr20 69126386 69126467 -3027415 + MIR SINE MIR 24 106 -102 204 40 0 0 chr20 69126484 69126509 -3027373 + (CAG)n Simple_repeat Simple_repeat 1 25 0 418 259 44 44 chr20 69126573 69126708 -3027174 - MIR SINE MIR -81 181 47 336 102 0 0 chr20 69128311 69128360 -3025522 + (TTCC)n Simple_repeat Simple_repeat 3 51 0 312 263 85 0 chr20 69128364 69128482 -3025400 + Charlie8 DNA MER1_type 75 202 -2215 970 208 5 5 chr20 69129044 69129236 -3024646 + MER58A DNA MER1_type 24 215 -9 215 229 16 0 chr20 69129262 69129323 -3024559 + (TA)n Simple_repeat Simple_repeat 1 62 0 367 262 64 43 chr20 69129425 69129566 -3024316 + L1MC4 LINE L1 7847 8042 0 418 318 35 18 chr20 69131077 69131247 -3022635 + MIR SINE MIR 13 185 -77 187 241 53 53 chr20 69131823 69131956 -3021926 - L2 LINE L2 -219 3053 2921 283 321 9 19 chr20 69134179 69134285 -3019597 + L2 LINE L2 3162 3266 -6 486 265 6 47 chr20 69134600 69134770 -3019112 - MLT1K LTR MaLR -12 576 414 282 263 211 18 chr20 69135171 69135285 -3018597 - MIR SINE MIR -14 248 113 231 219 0 0 chr20 69135397 69135438 -3018444 + L2 LINE L2 3230 3270 -2 912 187 0 0 chr20 69135798 69136237 -3017645 + (TTCA)n Simple_repeat Simple_repeat 1 439 0 225 163 0 0 chr20 69136249 69136298 -3017584 + (TTCA)n Simple_repeat Simple_repeat 1 49 0 295 302 83 88 chr20 69136303 69136723 -3017159 - L2 LINE L2 -2 3270 2853 323 243 63 9 chr20 69137429 69137540 -3016342 + MER45A DNA AcHobo 39 155 -23 2229 103 30 3 chr20 69137920 69138220 -3015662 - AluSg SINE Alu -2 308 1 2057 110 72 0 chr20 69138230 69138522 -3015360 - AluSq SINE Alu 0 313 1 2651 38 0 0 chr20 69140406 69140699 -3013183 - AluSg SINE Alu -7 303 11 558 304 95 41 chr20 69140928 69141319 -3012563 - Charlie8 DNA MER1_type -1917 500 89 591 211 8 16 chr20 69141372 69141500 -3012382 - LTR16C LTR ERVL 0 491 365 688 249 170 22 chr20 69141571 69141662 -3012220 - MER5C DNA MER1_type 0 324 248 2226 107 3 38 chr20 69141662 69141980 -3011902 + AluSg SINE Alu 1 307 -3 688 249 170 22 chr20 69141980 69142165 -3011717 - MER5C DNA MER1_type -76 248 7 1061 205 0 5 chr20 69142452 69142637 -3011245 + MER5A DNA MER1_type 4 187 -2 744 186 31 77 chr20 69143737 69143931 -3009951 + MER20 DNA MER1_type 2 186 -33 575 39 0 0 chr20 69143948 69144025 -3009857 + L1PA4 LINE L1 6078 6154 -1 1440 302 29 39 chr20 69147365 69147984 -3005898 + HERV16 LTR ERVL 2307 2919 -2077 2391 103 3 0 chr20 69148025 69148336 -3005546 + AluSx SINE Alu 1 312 0 343 291 36 96 chr20 69148348 69148599 -3005283 + HERV16 LTR ERVL 3318 3553 -2101 279 327 122 21 chr20 69148619 69148946 -3004936 + LTR16A LTR ERVL 11 370 -80 274 204 0 0 chr20 69149111 69149165 -3004717 - MLT1J1 LTR MaLR -154 292 239 597 302 72 20 chr20 69149338 69149729 -3004153 - LTR16C LTR ERVL -1 490 80 798 165 6 16 chr20 69149878 69150060 -3003822 + CT-rich Low_complexity Low_complexity 1 180 0 189 354 62 10 chr20 69150089 69150185 -3003697 - L2 LINE L2 -35 3237 3137 227 275 14 0 chr20 69150356 69150425 -3003457 + (TG)n Simple_repeat Simple_repeat 1 70 0 369 0 0 0 chr20 69151323 69151364 -3002518 + (CA)n Simple_repeat Simple_repeat 2 42 0 207 0 0 0 chr20 69151363 69151386 -3002496 + (GA)n Simple_repeat Simple_repeat 2 24 0 * 209 333 95 9 chr20 69152535 69152640 -3001242 - MIR SINE MIR -43 219 106 642 278 32 0 chr20 69152708 69152895 -3000987 - MER3 DNA MER1_type -14 195 3 410 260 70 0 chr20 69153348 69153448 -3000434 + MIR SINE MIR 47 153 -55 577 228 108 60 chr20 69153691 69153959 -2999923 - LTR16A1 LTR ERVL -1 456 176 1166 95 0 0 chr20 69154842 69155034 -2998848 - AluSc SINE Alu 0 324 133 617 253 74 20 chr20 69155297 69155499 -2998383 + MIR SINE MIR 6 218 -44 2153 123 0 0 chr20 69157379 69157681 -2996201 + AluSc SINE Alu 3 304 -5 293 312 83 28 chr20 69157814 69157923 -2995959 - L2 LINE L2 -17 3255 3141 228 345 43 26 chr20 69159923 69160039 -2993843 + MIR SINE MIR 34 151 -111 314 344 30 0 chr20 69160142 69160273 -2993609 - L2 LINE L2 -1 3271 3137 324 280 92 118 chr20 69160414 69160836 -2993046 - L2 LINE L2 -21 3251 2841 268 229 36 36 chr20 69161271 69161354 -2992528 + L1MC/D LINE L1 5689 5771 -2037 425 216 10 10 chr20 69161362 69161459 -2992423 - MER20 DNA MER1_type 0 219 123 2442 97 7 0 chr20 69162565 69162875 -2991007 + AluSx SINE Alu 1 312 0 296 274 115 86 chr20 69163232 69163466 -2990416 + MIR SINE MIR 1 241 -21 642 265 94 0 chr20 69165143 69165313 -2988569 - MIR SINE MIR -68 194 9 359 326 143 22 chr20 69165329 69165559 -2988323 - MIR SINE MIR -4 258 1 515 312 106 25 chr20 69165602 69165839 -2988043 - MIR SINE MIR -1 261 6 2200 125 0 0 chr20 69166082 69166377 -2987505 - AluSx SINE Alu -17 295 1 1189 241 157 31 chr20 69166537 69166859 -2987023 + MLT1K LTR MaLR 14 294 -294 2300 221 66 14 chr20 69166859 69167374 -2986508 + MLT1F LTR MaLR 1 542 0 1189 241 157 31 chr20 69167374 69167562 -2986320 + MLT1K LTR MaLR 294 588 0 500 205 51 8 chr20 69168783 69168900 -2984982 - MIR SINE MIR -110 152 31 466 298 119 47 chr20 69169922 69170369 -2983513 - L2 LINE L2 -16 3297 2819 244 219 16 47 chr20 69170413 69170477 -2983405 - MLT1D LTR MaLR -443 62 1 1960 158 10 3 chr20 69170648 69170945 -2982937 + AluJo SINE Alu 1 299 -13 283 298 149 0 chr20 69171187 69171281 -2982601 - L2 LINE L2 -3 3310 3203 * 330 330 3 8 chr20 69171249 69171385 -2982497 - MIR SINE MIR -73 135 2 2338 125 19 24 chr20 69171672 69172049 -2981833 + THE1C LTR MaLR 1 375 0 205 296 141 37 chr20 69172108 69172243 -2981639 + L2 LINE L2 3025 3173 -99 274 278 28 76 chr20 69172467 69172579 -2981303 + L2 LINE L2 3176 3281 -32 1881 128 133 79 chr20 69172579 69172985 -2980897 + MSTA LTR MaLR 1 428 0 274 278 28 76 chr20 69172985 69173016 -2980866 + L2 LINE L2 3281 3312 -1 284 243 97 39 chr20 69173673 69173879 -2980003 - L1MC5 LINE L1 -214 7747 7530 505 239 51 0 chr20 69173895 69174033 -2979849 + L1MC5 LINE L1 6923 7067 -894 408 294 26 0 chr20 69174268 69174421 -2979461 - MER45A DNA AcHobo -6 172 16 386 236 138 0 chr20 69175404 69175527 -2978355 - MER5B DNA MER1_type -38 140 1 758 217 30 0 chr20 69176301 69176467 -2977415 - MER5A DNA MER1_type -18 171 1 311 311 0 0 chr20 69176500 69176590 -2977292 - MIR SINE MIR -127 135 46 468 269 28 28 chr20 69176696 69176841 -2977041 + MER5B DNA MER1_type 15 159 -19 530 184 171 19 chr20 69177024 69177182 -2976700 + MER53 DNA DNA 1 182 -7 1670 254 76 9 chr20 69177797 69178376 -2975506 - MLT1E2 LTR MaLR -8 618 1 304 189 54 54 chr20 69179422 69179496 -2974386 - L2 LINE L2 -5 3267 3194 404 235 208 20 chr20 69179528 69179677 -2974205 - MER5B DNA MER1_type 0 178 2 228 325 48 0 chr20 69180131 69180214 -2973668 + L2 LINE L2 3201 3287 -26 202 219 0 0 chr20 69180446 69180487 -2973395 + CT-rich Low_complexity Low_complexity 4 44 0 984 104 0 92 chr20 69180520 69180693 -2973189 - MER1B DNA MER1_type 0 339 183 1931 90 35 38 chr20 69180693 69181094 -2972788 - LTR7 LTR ERV1 0 450 1 748 165 177 0 chr20 69181095 69181253 -2972629 - MER1B DNA MER1_type -111 186 1 280 154 90 64 chr20 69181257 69181311 -2972571 - L2 LINE L2 -499 2815 2757 2398 193 99 10 chr20 69181311 69181824 -2972058 - MER89 LTR ERV1 0 559 1 280 154 90 64 chr20 69181824 69181847 -2972035 - L2 LINE L2 -557 2757 2736 1113 167 57 20 chr20 69181863 69182109 -2971773 - L1MB8 LINE L1 -14 6164 5910 758 201 81 139 chr20 69182265 69182697 -2971185 - L1ME2 LINE L1 -71 6093 5690 2403 92 0 3 chr20 69182697 69183002 -2970880 - AluY SINE Alu -7 304 1 758 201 81 139 chr20 69183002 69183052 -2970830 - L1ME2 LINE L1 -474 5690 5639 2764 113 19 7 chr20 69183145 69183569 -2970313 - MER57B LTR ERV1 -5 429 1 1594 244 18 18 chr20 69183575 69183591 -2970291 - L1ME2 LINE L1 -1082 5064 5049 1737 161 13 35 chr20 69183591 69183901 -2969981 - AluSx SINE Alu -9 303 1 1594 244 18 18 chr20 69183901 69184380 -2969502 - L1ME2 LINE L1 -1096 5050 4569 508 96 160 11 chr20 69184398 69184492 -2969390 + MER4A LTR ERV1 1 108 -556 1925 169 84 62 chr20 69184658 69185195 -2968687 + MER4A LTR ERV1 116 664 0 487 238 81 0 chr20 69185215 69185387 -2968495 - L1ME2 LINE L1 -1635 4511 4326 2408 104 7 3 chr20 69185387 69185695 -2968187 + AluSg SINE Alu 1 309 -1 246 192 0 0 chr20 69185724 69185776 -2968106 + L1M4 LINE L1 4576 4627 -1519 928 261 43 19 chr20 69185887 69186309 -2967573 - L1ME2 LINE L1 -2629 3517 3086 * 3254 161 51 73 chr20 69186297 69187080 -2966802 - L1MB3 LINE L1 -1 6182 5417 2009 204 0 0 chr20 69187334 69187682 -2966200 + MER7A DNA MER2_type 1 346 0 1967 217 67 57 chr20 69187694 69187938 -2965944 - MER63C DNA MER1_type -166 894 654 1118 36 36 6 chr20 69187938 69188104 -2965778 + (TTTC)n Simple_repeat Simple_repeat 2 172 0 1896 98 25 49 chr20 69188106 69188391 -2965491 - AluSx SINE Alu -34 278 1 1967 217 67 57 chr20 69188391 69188788 -2965094 - MER63C DNA MER1_type -406 654 244 252 167 21 104 chr20 69188724 69188820 -2965062 + MER63 DNA MER1_type 435 522 -539 * 439 299 37 18 chr20 69188932 69189096 -2964786 - MER63 DNA MER1_type -761 169 3 246 219 16 0 chr20 69189746 69189810 -2964072 - MER81 DNA DNA 0 114 50 1818 199 119 0 chr20 69189815 69190251 -2963631 - MLT1D LTR MaLR 0 505 18 271 139 0 0 chr20 69190262 69190305 -2963577 - MER81 DNA DNA -70 44 2 271 303 61 0 chr20 69190476 69190575 -2963307 + MIR SINE MIR 77 181 -81 1193 183 54 26 chr20 69191008 69191326 -2962556 + L1MB3 LINE L1 5822 6152 -31 522 218 27 0 chr20 69191397 69191507 -2962375 - MER81 DNA DNA 0 114 2 292 319 9 35 chr20 69191567 69191683 -2962199 - MER5B DNA MER1_type -4 174 62 2287 77 6 55 chr20 69191714 69192026 -2961856 + AluSc SINE Alu 1 297 -12 2199 101 39 0 chr20 69193119 69193405 -2960477 - AluSx SINE Alu -15 297 1 329 339 36 18 chr20 69193563 69193731 -2960151 - MER5B DNA MER1_type 0 178 8 514 258 16 59 chr20 69193897 69194083 -2959799 - MER58C DNA MER1_type 0 215 38 1050 259 72 17 chr20 69194104 69194506 -2959376 - L1ME3A LINE L1 -337 5833 5410 306 0 0 0 chr20 69194809 69194843 -2959039 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 965 83 0 0 chr20 69194843 69194963 -2958919 - AluY SINE Alu -191 120 1 920 306 37 44 chr20 69194974 69195653 -2958229 - L1ME3A LINE L1 -846 5300 4627 765 290 57 15 chr20 69195654 69195862 -2958020 - L1ME3A LINE L1 -1923 4223 4025 264 77 0 0 chr20 69195862 69195901 -2957981 + (TG)n Simple_repeat Simple_repeat 2 40 0 765 290 57 15 chr20 69195901 69196096 -2957786 - L1ME3A LINE L1 -2121 4025 3803 613 326 8 41 chr20 69196192 69196437 -2957445 + MIR SINE MIR 2 238 -24 727 162 14 47 chr20 69196497 69196645 -2957237 - MER68 LTR ERV1 -14 548 406 * 1309 177 43 0 chr20 69196643 69196897 -2956985 - MER68 LTR ERV1 -296 266 2 630 311 129 11 chr20 69197057 69197436 -2956446 - L1ME3A LINE L1 -2459 3687 3264 206 256 73 73 chr20 69197537 69197619 -2956263 + MIR SINE MIR 66 147 -61 2188 110 23 0 chr20 69197740 69198040 -2955842 + AluSq SINE Alu 1 307 -6 613 326 8 41 chr20 69198340 69198585 -2955297 - MIR SINE MIR -24 238 2 2307 105 0 37 chr20 69199022 69199345 -2954537 - AluY SINE Alu 0 311 1 2240 93 3 20 chr20 69200671 69200971 -2952911 + AluSx SINE Alu 1 295 -17 433 242 109 30 chr20 69201213 69201378 -2952504 - MER5B DNA MER1_type 0 178 1 2499 82 0 3 chr20 69202749 69203055 -2950827 + AluSx SINE Alu 1 305 -7 712 244 39 5 chr20 69203632 69203837 -2950045 + MER20 DNA MER1_type 7 218 -1 743 244 114 42 chr20 69203903 69204289 -2949593 - MLT1D LTR MaLR -91 414 1 349 247 11 11 chr20 69204302 69204395 -2949487 - MIR SINE MIR -77 185 93 1776 188 80 56 chr20 69204770 69205218 -2948664 - MLT1C LTR MaLR -4 463 5 658 248 8 0 chr20 69205477 69205606 -2948276 - MER90 LTR ERV1 0 614 485 2236 100 7 0 chr20 69205823 69206114 -2947768 + AluSq SINE Alu 1 293 -20 1513 243 56 12 chr20 69206953 69207361 -2946521 + L1MCc LINE L1 17 442 -5981 1998 274 55 33 chr20 69207513 69208470 -2945412 + L1MCc LINE L1 1851 2828 -4294 1154 271 86 0 chr20 69208502 69208886 -2944996 + L1MCc LINE L1 2910 3326 -3615 506 289 83 18 chr20 69209067 69209285 -2944597 - MIR SINE MIR 0 262 27 2658 46 0 0 chr20 69209285 69209592 -2944290 - AluY SINE Alu -3 308 2 887 153 0 0 chr20 69210034 69210165 -2943717 + FLAM_C SINE Alu 1 131 -12 2197 93 0 10 chr20 69211120 69211411 -2942471 + AluY SINE Alu 1 288 -23 343 297 36 29 chr20 69211944 69212082 -2941800 - MER5B DNA MER1_type -38 140 2 2264 222 70 25 chr20 69212160 69212731 -2941151 + MLT1E LTR MaLR 1 549 0 1999 195 66 34 chr20 69212845 69213317 -2940565 - MLT1D LTR MaLR 0 505 19 312 107 89 18 chr20 69213407 69213463 -2940419 - MER94 DNA DNA -41 93 34 409 224 136 31 chr20 69213514 69213680 -2940202 - L1MC5 LINE L1 -305 7656 7458 3112 133 33 2 chr20 69213680 69214140 -2939742 - MER101 LTR ERV1 0 474 1 409 224 136 31 chr20 69214140 69214201 -2939681 - L1MC5 LINE L1 -503 7458 7405 2175 83 3 28 chr20 69214221 69214532 -2939350 - AluSq SINE Alu 0 306 3 2404 104 0 0 chr20 69214586 69214893 -2938989 - AluSx SINE Alu -5 307 1 2076 256 38 73 chr20 69214898 69215711 -2938171 - L1MC5 LINE L1 -576 7385 6607 180 0 0 0 chr20 69215711 69215731 -2938151 + (TA)n Simple_repeat Simple_repeat 2 21 0 2076 256 38 73 chr20 69215731 69216033 -2937849 - L1MC5 LINE L1 -1354 6607 6296 2367 67 0 3 chr20 69216356 69216641 -2937241 + AluY SINE Alu 1 284 -27 1885 157 72 0 chr20 69216659 69216990 -2936892 - MLT1A1 LTR MaLR 0 365 11 216 0 0 0 chr20 69217011 69217035 -2936847 + (CA)n Simple_repeat Simple_repeat 1 24 0 2284 111 0 0 chr20 69217075 69217372 -2936510 + AluSq SINE Alu 1 297 -16 1335 275 78 23 chr20 69217372 69217696 -2936186 - L1MC5 LINE L1 -1899 5909 5543 1991 144 3 7 chr20 69217696 69218001 -2935881 + AluJb SINE Alu 1 304 -8 1335 275 78 23 chr20 69218001 69218203 -2935679 - L1MC5 LINE L1 -2265 5543 5354 2475 68 0 3 chr20 69218511 69218807 -2935075 + AluY SINE Alu 10 304 -7 21 0 0 0 chr20 69218883 69218904 -2934978 + AT_rich Low_complexity Low_complexity 1 21 0 4408 116 22 12 chr20 69218904 69219270 -2934612 - L1PB1 LINE L1 0 6151 5775 207 0 0 0 chr20 69219270 69219293 -2934589 + (TA)n Simple_repeat Simple_repeat 2 24 0 4408 116 22 12 chr20 69219293 69219572 -2934310 - L1PB1 LINE L1 -376 5775 5500 427 230 30 0 chr20 69219795 69219895 -2933987 - L1MC5 LINE L1 -852 7109 7007 289 236 141 139 chr20 69219896 69220565 -2933317 - L1MC4a LINE L1 -1088 6720 6051 749 273 137 18 chr20 69220655 69221009 -2932873 - L1MC4a LINE L1 -723 5431 5292 662 216 84 76 chr20 69221047 69221328 -2932554 - L1ME1 LINE L1 -291 5873 5590 358 290 20 0 chr20 69221341 69221441 -2932441 - L1ME LINE L1 -537 5629 5528 275 258 0 0 chr20 69221557 69221623 -2932259 + Charlie1 DNA MER1_type 2676 2741 -20 2136 118 3 28 chr20 69221910 69222231 -2931651 - AluSq SINE Alu 0 313 1 1501 192 184 3 chr20 69222725 69223105 -2930777 - MER66A LTR ERV1 -3 475 27 258 324 127 6 chr20 69223796 69223969 -2929913 - L1MC5 LINE L1 -67 7894 7701 2284 196 28 26 chr20 69224136 69224565 -2929317 - LOR1b LTR ERV1 -1 460 28 2383 79 0 10 chr20 69224565 69224869 -2929013 + AluY SINE Alu 1 301 -10 2284 196 28 26 chr20 69224869 69224898 -2928984 - LOR1b LTR ERV1 -433 28 1 1705 177 6 25 chr20 69224973 69225290 -2928592 - AluJb SINE Alu -1 311 1 824 248 63 83 chr20 69225633 69226141 -2927741 - L1MC5 LINE L1 -732 7229 6732 4086 172 55 18 chr20 69227919 69228407 -2925475 + L1MA9 LINE L1 5455 5987 -325 2319 71 7 7 chr20 69228407 69228701 -2925181 + AluSc SINE Alu 1 294 -15 4086 172 55 18 chr20 69228701 69229036 -2924846 + L1MA9 LINE L1 5987 6308 -4 1841 126 44 27 chr20 69229052 69229175 -2924707 + AluSq SINE Alu 1 120 -193 2224 107 0 0 chr20 69229175 69229473 -2924409 + AluY SINE Alu 1 298 -13 1841 126 44 27 chr20 69229473 69229643 -2924239 + AluSq SINE Alu 120 299 -14 225 154 0 0 chr20 69229644 69229683 -2924199 + GA-rich Low_complexity Low_complexity 1 39 0 2010 146 7 10 chr20 69229685 69229987 -2923895 + AluSx SINE Alu 1 301 -11 7249 243 38 14 chr20 69229987 69231107 -2922775 + L1ME1 LINE L1 2175 3267 -3159 2280 104 10 0 chr20 69231107 69231415 -2922467 + AluY SINE Alu 1 311 0 7249 243 38 14 chr20 69231415 69232769 -2921113 + L1ME1 LINE L1 3267 4709 -1717 1000 191 34 1 chr20 69232968 69233180 -2920702 - L1M3c LINE L1 -4516 1841 1256 312 257 69 81 chr20 69233213 69233474 -2920408 + L1MC5 LINE L1 7637 7894 -67 252 242 0 0 chr20 69234930 69234992 -2918890 - Charlie1 DNA MER1_type -20 2741 2680 260 233 35 35 chr20 69235029 69235145 -2918737 - Charlie1 DNA MER1_type -66 2695 2580 284 246 29 0 chr20 69235145 69235214 -2918668 + L1ME1 LINE L1 5816 5886 -2179 609 196 75 95 chr20 69235293 69235317 -2918565 + L1ME1 LINE L1 5899 5922 -524 4374 130 49 68 chr20 69235317 69236117 -2917765 + LTR1 LTR ERV1 1 785 0 609 196 75 95 chr20 69236117 69236355 -2917527 + L1ME1 LINE L1 5922 6148 -298 271 238 42 67 chr20 69236352 69236545 -2917337 + L1MC1 LINE L1 5257 5444 -2364 * 272 252 47 19 chr20 69236514 69236621 -2917261 + L1MC1 LINE L1 2933 3042 -3104 * 4732 206 59 22 chr20 69236618 69237670 -2916212 + L1MC1 LINE L1 3775 4787 -1546 2372 85 0 3 chr20 69237670 69237964 -2915918 - AluSq SINE Alu -20 293 1 4732 206 59 22 chr20 69237964 69239005 -2914877 + L1MC1 LINE L1 4787 5957 -376 366 293 0 0 chr20 69239005 69239137 -2914745 + L1M4 LINE L1 4965 5096 -1050 2000 150 71 6 chr20 69239166 69239519 -2914363 + L1MC1 LINE L1 5958 6333 0 27 0 0 0 chr20 69239617 69239644 -2914238 + AT_rich Low_complexity Low_complexity 1 27 0 43965 31 22 1 chr20 69239646 69245672 -2908210 - L1PA3 LINE L1 0 6155 2 1658 182 3 10 chr20 69245709 69246000 -2907882 + AluJb SINE Alu 1 289 -23 14732 201 44 23 chr20 69246120 69249657 -2904225 - L1MEc LINE L1 -1112 5216 1755 345 47 0 0 chr20 69249657 69249700 -2904182 + (TTTCC)n Simple_repeat Simple_repeat 2 44 0 14732 201 44 23 chr20 69249700 69250123 -2903759 - L1MEc LINE L1 -4573 1755 1342 2387 93 0 10 chr20 69250123 69250435 -2903447 - AluY SINE Alu -2 309 1 14732 201 44 23 chr20 69250435 69250973 -2902909 - L1MEc LINE L1 -4986 1342 817 2167 84 31 0 chr20 69250973 69251259 -2902623 + AluY SINE Alu 1 295 -16 14732 201 44 23 chr20 69251259 69251287 -2902595 - L1MEc LINE L1 -5511 817 791 1211 184 173 71 chr20 69251287 69251737 -2902145 + LTR54B LTR ERV1 1 496 -2 14732 201 44 23 chr20 69251737 69252219 -2901663 - L1MEc LINE L1 -5537 791 699 818 288 76 61 chr20 69252321 69252942 -2900940 - L1M4c LINE L1 -4438 2125 1347 654 238 70 71 chr20 69253062 69253490 -2900392 + L1MEc LINE L1 2178 2562 -3653 1413 223 94 40 chr20 69254301 69254780 -2899102 - MLT1D LTR MaLR 0 505 1 2624 281 42 21 chr20 69255057 69255829 -2898053 + L1PA15 LINE L1 1 788 -5999 9361 178 28 11 chr20 69255914 69256239 -2897643 + L1PA15 LINE L1 3811 4129 -2687 2070 102 0 41 chr20 69256239 69256532 -2897350 + AluSx SINE Alu 32 312 0 9361 178 28 11 chr20 69256532 69259161 -2894721 + L1PA15 LINE L1 4129 6814 -2 1557 92 0 29 chr20 69259238 69259445 -2894437 - AluSg/x SINE Alu -10 300 100 1775 205 70 32 chr20 69259445 69259888 -2893994 - LTR2B LTR ERV1 0 490 31 34037 75 4 7 chr20 69259907 69264465 -2889417 - Harlequin LTR ERV1 -3 6893 2349 843 131 0 7 chr20 69264444 69264597 -2889285 - Harlequin LTR ERV1 -4938 1958 1807 * 256 267 163 23 chr20 69264609 69264695 -2889187 + LTR8 LTR ERV1 156 253 -438 2187 66 19 3 chr20 69264695 69265012 -2888870 - HERVE LTR ERV1 -5174 1722 1401 * 5091 75 60 40 chr20 69264992 69265791 -2888091 - HERVE LTR ERV1 -5819 1077 263 787 108 0 58 chr20 69265784 69265923 -2887959 - HERVE LTR ERV1 -7428 385 255 * 2681 95 8 13 chr20 69265907 69266296 -2887586 - HERVE LTR ERV1 -6509 387 1 1971 178 93 32 chr20 69266296 69266758 -2887124 - LTR2B LTR ERV1 0 490 1 716 128 0 0 chr20 69266758 69266860 -2887022 - AluSc SINE Alu -206 103 2 616 267 58 72 chr20 69266987 69267346 -2886536 + MER115 DNA AcHobo 321 674 -19 919 157 34 6 chr20 69268127 69268305 -2885577 + MER53 DNA DNA 7 189 0 483 284 21 26 chr20 69269373 69269528 -2884354 - MIR SINE MIR -46 162 5 231 176 20 0 chr20 69269581 69269632 -2884250 - MER117 DNA MER1_type -55 142 91 310 252 55 24 chr20 69269704 69269831 -2884051 - LTR67 LTR ERVL -1 556 426 958 174 82 0 chr20 69270050 69270257 -2883625 + L1MB4 LINE L1 5954 6177 -3 3459 170 50 13 chr20 69270292 69271005 -2882877 + L1MB3 LINE L1 5444 6183 0 980 207 98 57 chr20 69271462 69271848 -2882034 + LTR37A LTR ERV1 5 406 -20 401 79 40 40 chr20 69272492 69272593 -2881289 + (CAGAGA)n Simple_repeat Simple_repeat 2 102 0 806 106 21 52 chr20 69272611 69273197 -2880685 + (CAGAGA)n Simple_repeat Simple_repeat 1 567 0 408 235 17 59 chr20 69273213 69273581 -2880301 + (CAGAGA)n Simple_repeat Simple_repeat 1 352 0 224 250 22 52 chr20 69273598 69273734 -2880148 + (CAGAGA)n Simple_repeat Simple_repeat 4 135 0 287 306 18 9 chr20 69274013 69274124 -2879758 + MER94 DNA DNA 17 128 -6 826 175 169 0 chr20 69274777 69274966 -2878916 + MER58A DNA MER1_type 1 221 -3 358 186 53 53 chr20 69275600 69275713 -2878169 - L2 LINE L2 -3 3269 3157 517 192 0 16 chr20 69275762 69275944 -2877938 + (TG)n Simple_repeat Simple_repeat 1 179 0 335 222 56 0 chr20 69276400 69276472 -2877410 - MER94 DNA DNA -1 133 58 263 319 7 14 chr20 69277182 69277323 -2876559 + GA-rich Low_complexity Low_complexity 1 140 0 689 126 38 14 chr20 69277323 69277537 -2876345 + (TGGA)n Simple_repeat Simple_repeat 1 219 0 1790 179 29 5 chr20 69277880 69278259 -2875623 - L1MB7 LINE L1 -16 6168 5781 1645 162 42 33 chr20 69278262 69278461 -2875421 - MER2 DNA MER2_type -4 341 136 1297 124 64 9 chr20 69278461 69278679 -2875203 - MER30 DNA MER1_type 0 230 1 1645 162 42 33 chr20 69278679 69278812 -2875070 - MER2 DNA MER2_type -209 136 6 1242 184 0 0 chr20 69278833 69279050 -2874832 - L1MB7 LINE L1 -415 5763 5547 1417 190 55 14 chr20 69280461 69280751 -2873131 - AluJo SINE Alu 0 312 11 24 0 0 0 chr20 69280757 69280781 -2873101 + AT_rich Low_complexity Low_complexity 1 24 0 673 167 8 0 chr20 69280781 69280901 -2872981 - L1MB5 LINE L1 -9 6165 6045 245 305 74 21 chr20 69280941 69281036 -2872846 - L2 LINE L2 -5 3267 3168 268 303 50 0 chr20 69281126 69281225 -2872657 - MER117 DNA MER1_type -6 191 88 567 240 33 13 chr20 69281575 69281725 -2872157 - MER45A DNA AcHobo 0 178 26 282 298 57 16 chr20 69282110 69282234 -2871648 + MLT1K LTR MaLR 449 577 -11 364 345 117 14 chr20 69282620 69282843 -2871039 + MIR SINE MIR 15 260 -2 463 287 184 35 chr20 69283222 69283623 -2870259 - MLT1K LTR MaLR -88 500 40 210 333 0 14 chr20 69283833 69283902 -2869980 - L2 LINE L2 -225 3047 2980 434 302 52 12 chr20 69283939 69284111 -2869771 + MIR SINE MIR 43 221 -41 235 296 136 0 chr20 69284141 69284229 -2869653 + MIR SINE MIR 124 223 -39 217 250 0 26 chr20 69284991 69285067 -2868815 - MIR3 SINE MIR -54 154 81 212 219 47 0 chr20 69285297 69285361 -2868521 + C-rich Low_complexity Low_complexity 3 69 0 315 240 72 32 chr20 69285726 69285851 -2868031 + MIR SINE MIR 16 145 -117 494 213 75 44 chr20 69286437 69286597 -2867285 + MER20 DNA MER1_type 55 219 0 208 324 14 0 chr20 69287238 69287309 -2866573 - L2 LINE L2 -10 3303 3232 2398 84 0 0 chr20 69289468 69289765 -2864117 + AluY SINE Alu 1 297 -14 180 250 0 21 chr20 69289767 69289815 -2864067 + L2 LINE L2 3267 3313 0 540 298 105 26 chr20 69290114 69290836 -2863046 - L1MC4a LINE L1 -505 5659 5086 386 287 9 0 chr20 69290853 69290961 -2862921 - MER81 DNA DNA 0 114 6 269 253 0 6 chr20 69292090 69292248 -2861634 + (TG)n Simple_repeat Simple_repeat 1 157 0 538 290 0 38 chr20 69292268 69292454 -2861428 + (TG)n Simple_repeat Simple_repeat 1 179 0 801 209 14 47 chr20 69292705 69292916 -2860966 - MLT1B LTR MaLR -186 204 1 261 276 87 17 chr20 69292916 69293188 -2860694 - MLT1H LTR MaLR -249 346 17 965 187 35 0 chr20 69293205 69293403 -2860479 + MER68 LTR ERV1 358 562 0 350 198 115 10 chr20 69294683 69294779 -2859103 - MIR SINE MIR -117 145 40 215 243 66 67 chr20 69295167 69295350 -2858532 + MIR3 SINE MIR 11 192 -70 1239 210 124 68 chr20 69295355 69295601 -2858281 - MLT1E2 LTR MaLR -11 615 384 333 68 0 0 chr20 69295601 69295645 -2858237 + (CTGGGG)n Simple_repeat Simple_repeat 6 49 0 1239 210 124 68 chr20 69295645 69295955 -2857927 - MLT1E2 LTR MaLR -242 384 26 326 370 33 18 chr20 69296150 69296423 -2857459 + L2 LINE L2 2502 2778 -536 194 271 0 0 chr20 69296605 69296653 -2857229 + L2 LINE L2 3265 3312 -1 205 274 0 0 chr20 69297953 69298004 -2855878 + (TG)n Simple_repeat Simple_repeat 1 51 0 298 237 193 11 chr20 69298104 69298367 -2855515 - L1MC/D LINE L1 -354 5810 5488 1178 203 38 8 chr20 69298520 69298786 -2855096 - MLT1A1 LTR MaLR 0 365 92 513 259 51 56 chr20 69298800 69298997 -2854885 - MER3 DNA MER1_type 0 209 14 189 130 0 109 chr20 69299327 69299373 -2854509 - MIR SINE MIR -70 138 98 281 325 8 49 chr20 69300022 69300145 -2853737 + L2 LINE L2 2911 3028 -285 1119 184 14 0 chr20 69300159 69300376 -2853506 - L1MC1 LINE L1 -12 6321 6102 4736 197 45 17 chr20 69300429 69302365 -2851517 - L1MC1 LINE L1 -238 6095 4097 3500 246 7 43 chr20 69302374 69303050 -2850832 - L1MC1 LINE L1 -2715 3431 2811 1991 90 0 4 chr20 69303050 69303305 -2850577 + AluSg SINE Alu 2 255 -55 3500 246 7 43 chr20 69303305 69303755 -2850127 - L1MC1 LINE L1 -3335 2811 2346 818 245 40 26 chr20 69303772 69303996 -2849886 - L1ME3A LINE L1 0 6170 5940 1907 159 10 25 chr20 69303996 69304310 -2849572 - AluSx SINE Alu -3 309 1 818 245 40 26 chr20 69304310 69304358 -2849524 - L1ME3A LINE L1 -230 5940 5894 262 167 182 30 chr20 69304631 69304697 -2849185 + L2 LINE L2 3221 3296 -17 216 328 0 0 chr20 69304859 69304920 -2848962 + L2 LINE L2 3209 3269 -3 226 286 151 16 chr20 69305043 69305169 -2848713 + MIR SINE MIR 99 241 -21 583 265 80 13 chr20 69305296 69305534 -2848348 + MIR SINE MIR 4 257 -5 205 227 154 73 chr20 69307088 69307198 -2846684 - L2 LINE L2 0 3313 3195 252 0 0 0 chr20 69307554 69307582 -2846300 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 532 337 142 14 chr20 69307582 69308310 -2845572 + L2 LINE L2 2450 3272 0 1840 182 59 35 chr20 69308824 69309285 -2844597 - L1MB7 LINE L1 0 6184 5713 444 248 131 10 chr20 69309852 69310050 -2843832 - MER113 DNA MER1_type? -27 494 273 942 171 29 0 chr20 69310154 69310324 -2843558 + FAM SINE Alu 1 175 0 332 269 89 11 chr20 69310755 69310936 -2842946 + MIR SINE MIR 37 228 -34 284 244 58 23 chr20 69311140 69311226 -2842656 + L2 LINE L2 3225 3313 0 23 0 0 0 chr20 69311921 69311944 -2841938 + GC_rich Low_complexity Low_complexity 1 23 0 228 86 0 0 chr20 69312746 69312781 -2841101 + (T)n Simple_repeat Simple_repeat 1 35 0 21 0 0 0 chr20 69312862 69312883 -2840999 + GC_rich Low_complexity Low_complexity 1 21 0 308 294 82 57 chr20 69315198 69315392 -2838490 - L3 LINE CR1 -412 1165 967 648 279 105 49 chr20 69315701 69316092 -2837790 - L1ME LINE L1 -368 5753 5367 321 365 50 5 chr20 69316677 69316877 -2837005 + L2 LINE L2 3102 3310 -3 249 33 0 0 chr20 69317339 69317369 -2836513 + (CCCCCA)n Simple_repeat Simple_repeat 5 34 0 1767 176 3 3 chr20 69317841 69318136 -2835746 + AluJb SINE Alu 1 295 -17 929 181 62 5 chr20 69318388 69318581 -2835301 - MER3 DNA MER1_type -5 204 1 352 293 26 0 chr20 69318583 69318699 -2835183 + L2 LINE L2 3192 3310 -3 481 296 31 0 chr20 69318938 69319097 -2834785 + MIR SINE MIR 31 194 -68 299 222 0 133 chr20 69320174 69320229 -2833653 - Charlie8 DNA MER1_type -131 210 149 2011 105 6 84 chr20 69320229 69320552 -2833330 - AluSg SINE Alu -12 298 1 299 222 0 133 chr20 69320552 69320605 -2833277 - Charlie8 DNA MER1_type -192 149 121 2569 125 54 10 chr20 69320605 69321012 -2832870 - MSTB LTR MaLR 0 426 2 299 222 0 133 chr20 69321012 69321037 -2832845 - Charlie8 DNA MER1_type -220 121 94 415 286 148 43 chr20 69321040 69321407 -2832475 - MLT1J LTR MaLR -2 509 83 186 43 0 0 chr20 69321407 69321430 -2832452 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 415 286 148 43 chr20 69321430 69321523 -2832359 - MLT1J LTR MaLR -428 83 1 280 286 56 28 chr20 69322919 69323097 -2830785 - MER113 DNA MER1_type? -308 213 31 452 238 184 6 chr20 69323609 69323777 -2830105 - MLT1H LTR MaLR -340 209 12 534 215 133 56 chr20 69323918 69324113 -2829769 + MIR SINE MIR 28 237 -25 189 325 26 0 chr20 69324979 69325056 -2828826 + L2 LINE L2 3225 3303 -10 185 207 0 17 chr20 69325643 69325701 -2828181 + CT-rich Low_complexity Low_complexity 1 57 0 194 376 45 0 chr20 69325906 69326039 -2827843 - L2 LINE L2 -213 3059 2921 183 100 0 0 chr20 69326190 69326220 -2827662 + (TG)n Simple_repeat Simple_repeat 1 30 0 213 94 0 0 chr20 69326452 69326484 -2827398 + (GGGAA)n Simple_repeat Simple_repeat 2 33 0 1137 250 61 16 chr20 69326995 69327433 -2826449 + MLT1E3 LTR MaLR 53 504 -120 1021 172 27 0 chr20 69327419 69327605 -2826277 + MLT1E3 LTR MaLR 433 623 -1 * 224 259 137 23 chr20 69327608 69327739 -2826143 - MIR SINE MIR -97 165 20 2395 272 101 18 chr20 69328053 69328998 -2824884 - L1MC4a LINE L1 0 7808 6786 222 283 0 0 chr20 69329909 69330001 -2823881 + (TG)n Simple_repeat Simple_repeat 1 92 0 242 311 37 43 chr20 69330123 69330284 -2823598 + MIR SINE MIR 33 192 -70 180 0 0 0 chr20 69330850 69330870 -2823012 + (A)n Simple_repeat Simple_repeat 1 20 0 400 222 28 28 chr20 69331142 69331250 -2822632 + MIR SINE MIR 84 191 -71 526 286 25 12 chr20 69332214 69332375 -2821507 - MER5A DNA MER1_type -7 182 20 1384 209 70 3 chr20 69332619 69332977 -2820905 - L1MC3 LINE L1 -3 7782 7401 846 283 64 43 chr20 69334014 69334608 -2819274 - L2 LINE L2 -2 3311 2717 268 193 18 18 chr20 69334811 69334868 -2819014 - MER63 DNA MER1_type -97 739 683 387 274 61 18 chr20 69335074 69335238 -2818644 + LTR16C LTR ERVL 319 489 -2 522 240 116 44 chr20 69335242 69335517 -2818365 - L2 LINE L2 -788 2526 2232 224 148 37 12 chr20 69335595 69335676 -2818206 + (TCTA)n Simple_repeat Simple_repeat 4 86 0 221 201 32 26 chr20 69335711 69335865 -2818017 + (TCTA)n Simple_repeat Simple_repeat 3 157 0 262 284 0 14 chr20 69335902 69335976 -2817906 - L3 LINE CR1 -87 1490 1418 288 271 42 62 chr20 69336776 69336920 -2816962 - L1MD3 LINE L1 -90 7905 7765 674 166 15 134 chr20 69337265 69337474 -2816408 - MLT1C LTR MaLR -8 459 199 2410 99 0 0 chr20 69338048 69338351 -2815531 - AluSx SINE Alu -9 303 1 261 246 0 0 chr20 69339168 69339225 -2814657 - MER5A DNA MER1_type -99 90 34 945 288 55 22 chr20 69340207 69340568 -2813314 + MLT1K LTR MaLR 189 561 -27 3381 70 8 33 chr20 69341035 69341521 -2812361 + L1PA8A LINE L1 5655 6128 -3 579 307 92 9 chr20 69342096 69342324 -2811558 + MIR SINE MIR 8 254 -8 399 278 60 8 chr20 69342396 69342529 -2811353 + MER58B DNA MER1_type 202 341 0 888 239 0 24 chr20 69342594 69342807 -2811075 + MER3 DNA MER1_type 2 209 0 2099 141 3 0 chr20 69342931 69343402 -2810480 - AluSq SINE Alu 0 313 1 458 290 134 11 chr20 69344193 69344379 -2809503 - MIR SINE MIR -48 214 6 450 282 55 17 chr20 69344414 69344625 -2809257 + MIR SINE MIR 39 259 -3 468 311 120 18 chr20 69345724 69345949 -2807933 - MIR SINE MIR -14 248 1 216 340 134 0 chr20 69346135 69346232 -2807650 + L2 LINE L2 3160 3269 -3 697 173 13 0 chr20 69346245 69346401 -2807481 + (TGGA)n Simple_repeat Simple_repeat 1 158 0 413 214 17 0 chr20 69346417 69346534 -2807348 + (TGGA)n Simple_repeat Simple_repeat 4 122 0 814 139 25 0 chr20 69346555 69346713 -2807169 + (TGGA)n Simple_repeat Simple_repeat 1 162 0 434 205 17 0 chr20 69346729 69346846 -2807036 + (TGGA)n Simple_repeat Simple_repeat 4 122 0 696 182 17 6 chr20 69346875 69347051 -2806831 + (TGGA)n Simple_repeat Simple_repeat 1 178 0 376 214 0 68 chr20 69347452 69347555 -2806327 + MIR SINE MIR 34 129 -79 247 287 9 52 chr20 69347935 69348050 -2805832 + MIR SINE MIR 1 110 -152 346 313 69 7 chr20 69348375 69348519 -2805363 - Charlie8 DNA MER1_type -2152 265 113 296 236 22 0 chr20 69348837 69348926 -2804956 + (TA)n Simple_repeat Simple_repeat 2 92 0 275 148 37 0 chr20 69348926 69348980 -2804902 - MLT2B1 LTR ERVL 0 515 460 378 217 17 22 chr20 69348990 69349170 -2804712 + (TCTA)n Simple_repeat Simple_repeat 2 180 0 1796 216 117 5 chr20 69349170 69349582 -2804300 - MLT2B1 LTR ERVL -62 458 1 426 268 24 30 chr20 69350187 69350355 -2803527 - L1ME4a LINE L1 0 6121 5955 382 255 39 77 chr20 69350447 69350655 -2803227 - L1ME4a LINE L1 -318 5803 5604 2441 60 3 0 chr20 69350767 69351078 -2802804 - AluY SINE Alu 0 312 1 342 299 15 30 chr20 69352328 69352462 -2801420 + L2 LINE L2 3141 3272 0 1737 178 14 20 chr20 69352731 69353080 -2800802 - L1PA16 LINE L1 -9 6157 5811 189 0 0 0 chr20 69353090 69353111 -2800771 + (T)n Simple_repeat Simple_repeat 1 21 0 286 258 0 0 chr20 69353676 69353742 -2800140 + L2 LINE L2 3248 3313 0 2263 108 37 8 chr20 69354920 69355273 -2798609 - THE1B LTR MaLR -1 363 1 330 336 22 12 chr20 69355634 69355807 -2798075 + MIR SINE MIR 36 208 0 268 175 78 87 chr20 69355927 69356030 -2797852 - MLT1K LTR MaLR -18 570 469 316 319 25 8 chr20 69356231 69356350 -2797532 - MLT1K LTR MaLR -455 133 13 395 304 140 12 chr20 69358341 69358591 -2795291 + L1ME LINE L1 5418 5699 -465 189 0 0 0 chr20 69358609 69358630 -2795252 + (A)n Simple_repeat Simple_repeat 1 21 0 812 211 20 0 chr20 69358954 69359101 -2794781 + FRAM SINE Alu 7 156 -20 24 67 0 0 chr20 69359256 69359301 -2794581 + AT_rich Low_complexity Low_complexity 1 45 0 869 289 27 7 chr20 69359340 69359641 -2794241 + L1MC5 LINE L1 5561 5867 -1941 1720 203 55 57 chr20 69359651 69359696 -2794186 - MLT2B1 LTR ERVL -3 517 473 492 18 0 0 chr20 69359696 69359753 -2794129 + (TAGG)n Simple_repeat Simple_repeat 3 59 0 1720 203 55 57 chr20 69359753 69360125 -2793757 - MLT2B1 LTR ERVL -47 473 101 1550 134 3 68 chr20 69360132 69360439 -2793443 + AluJo SINE Alu 9 295 -17 243 152 152 81 chr20 69360466 69360565 -2793317 - L1M4b LINE L1 -5213 1646 1541 283 174 141 54 chr20 69360603 69360695 -2793187 - MLT2B1 LTR ERVL -415 100 1 1431 275 66 43 chr20 69360850 69361055 -2792827 + L1MC5 LINE L1 6053 6252 -1709 2088 114 0 3 chr20 69361055 69361352 -2792530 - AluSg SINE Alu -14 296 1 1431 275 66 43 chr20 69361352 69362291 -2791591 + L1MC5 LINE L1 6252 7233 -728 516 256 35 42 chr20 69362311 69362538 -2791344 + L1MC5 LINE L1 7244 7415 -393 1279 244 143 21 chr20 69362543 69362757 -2791125 - L1ME2 LINE L1 -92 6141 5954 210 71 0 0 chr20 69362757 69362785 -2791097 + (TG)n Simple_repeat Simple_repeat 2 29 0 1279 244 143 21 chr20 69362785 69363129 -2790753 - L1ME2 LINE L1 -279 5954 5497 561 154 0 26 chr20 69363134 69363251 -2790631 - L1MB8 LINE L1 0 6178 6065 4478 238 34 19 chr20 69363251 69365035 -2788847 - L1ME2 LINE L1 -2720 3495 1731 3536 236 44 29 chr20 69365062 69365120 -2788762 - L1M4c LINE L1 -4451 2687 2631 296 24 24 0 chr20 69365120 69365161 -2788721 + (TG)n Simple_repeat Simple_repeat 2 43 0 3536 236 44 29 chr20 69365161 69366797 -2787085 - L1M4c LINE L1 -4507 2631 832 558 333 35 49 chr20 69366802 69367150 -2786732 - L1ME2 LINE L1 -5265 1131 789 2190 103 7 0 chr20 69367239 69367539 -2786343 - AluSc SINE Alu -7 302 1 2406 62 7 0 chr20 69368081 69368385 -2785497 + AluY SINE Alu 1 306 -5 304 312 89 51 chr20 69369962 69370664 -2783218 - L2 LINE L2 0 3272 2556 1016 234 130 45 chr20 69370746 69371170 -2782712 - MLT1C LTR MaLR 0 467 8 275 328 16 8 chr20 69371551 69371676 -2782206 + MIR SINE MIR 29 154 -108 370 339 73 33 chr20 69372999 69373273 -2780609 - L1ME LINE L1 -336 5785 5501 792 169 0 0 chr20 69374387 69374565 -2779317 + GA-rich Low_complexity Low_complexity 2 179 0 1954 117 7 0 chr20 69376586 69376739 -2777143 - AluSq SINE Alu -29 284 127 441 0 0 0 chr20 69376739 69376788 -2777094 + (TTTTA)n Simple_repeat Simple_repeat 2 50 0 1954 117 7 0 chr20 69376788 69376916 -2776966 - AluSq SINE Alu -186 127 1 486 281 0 7 chr20 69376937 69377072 -2776810 + MIR SINE MIR 41 174 -88 2115 214 9 0 chr20 69377327 69377770 -2776112 - L1MB7 LINE L1 -9 6175 5729 346 330 8 8 chr20 69377868 69377986 -2775896 - L2 LINE L2 -11 3302 3185 503 225 75 46 chr20 69379338 69379511 -2774371 + Charlie8 DNA MER1_type 3 180 -2237 759 239 11 6 chr20 69379957 69380133 -2773749 + MER20 DNA MER1_type 43 219 0 201 265 184 10 chr20 69380137 69380235 -2773647 + MIR SINE MIR 36 150 -58 346 306 118 0 chr20 69380348 69380518 -2773364 + MIR SINE MIR 50 239 -23 252 330 68 15 chr20 69380680 69380886 -2772996 - L2 LINE L2 -608 2706 2490 241 258 56 45 chr20 69381106 69381195 -2772687 + MIR SINE MIR 103 192 -70 223 273 0 0 chr20 69381693 69381748 -2772134 + MIR SINE MIR 82 136 -72 437 234 5 37 chr20 69382228 69382988 -2770894 + CT-rich Low_complexity Low_complexity 1 735 0 440 232 0 20 chr20 69382988 69383087 -2770795 + C-rich Low_complexity Low_complexity 3 99 0 1040 173 30 0 chr20 69383485 69383682 -2770200 + MER20 DNA MER1_type 17 219 0 753 160 48 53 chr20 69386723 69386911 -2766971 - MER5A DNA MER1_type 0 189 3 2073 148 39 25 chr20 69387459 69387818 -2766064 - THE1B LTR MaLR 0 364 1 330 348 0 14 chr20 69387848 69387989 -2765893 + CT-rich Low_complexity Low_complexity 2 140 0 919 164 20 7 chr20 69388041 69388193 -2765689 - LTR32 LTR ERVL 0 471 318 296 109 65 0 chr20 69388198 69388244 -2765638 - LTR32 LTR ERVL -106 365 317 1908 154 26 46 chr20 69388300 69388431 -2765451 - LTR32 LTR ERVL -119 352 220 1580 93 75 0 chr20 69388431 69388645 -2765237 - MER30 DNA MER1_type 0 230 1 1908 154 26 46 chr20 69388645 69388858 -2765024 - LTR32 LTR ERVL -251 220 15 705 199 108 6 chr20 69388920 69389086 -2764796 + MER58A DNA MER1_type 34 216 -8 429 313 109 33 chr20 69389273 69389577 -2764305 + L3 LINE CR1 553 879 -698 2191 112 3 0 chr20 69389597 69389909 -2763973 + AluSp SINE Alu 1 313 0 2241 109 0 0 chr20 69389926 69390237 -2763645 + AluSx SINE Alu 1 311 -1 1193 258 133 42 chr20 69390289 69391252 -2762630 - L2 LINE L2 -36 3277 2223 805 288 45 25 chr20 69391300 69391658 -2762224 + MER113 DNA MER1_type? 54 418 -103 300 277 31 67 chr20 69392031 69392226 -2761656 - HAL1 LINE L1 -1519 988 801 550 261 152 28 chr20 69393208 69393419 -2760463 + MIR SINE MIR 6 242 -20 445 320 46 15 chr20 69393464 69393661 -2760221 + L2 LINE L2 2871 3073 -240 744 274 20 36 chr20 69394085 69394333 -2759549 + MIR SINE MIR 8 251 -11 1106 109 0 16 chr20 69394368 69394536 -2759346 + (ATGGTG)n Simple_repeat Simple_repeat 1 345 0 1106 109 0 16 chr20 69394536 69394719 -2759163 + (ATGGTG)n Simple_repeat Simple_repeat 1 180 0 881 161 0 12 chr20 69394734 69394983 -2758899 + (ATGGTG)n Simple_repeat Simple_repeat 1 246 0 750 207 0 0 chr20 69395011 69395190 -2758692 + (ATGGTG)n Simple_repeat Simple_repeat 1 179 0 183 303 118 0 chr20 69395470 69395546 -2758336 - MER5C DNA MER1_type -1 323 239 907 281 66 12 chr20 69395720 69396147 -2757735 - MER113 DNA MER1_type? -61 460 11 196 116 23 70 chr20 69397497 69397540 -2756342 - MIR3 SINE MIR -51 157 117 286 318 68 37 chr20 69397604 69397925 -2755957 + L2 LINE L2 2430 2760 -554 201 39 0 0 chr20 69397961 69397987 -2755895 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 210 257 43 141 chr20 69398132 69398408 -2755474 + L2 LINE L2 2986 3234 -38 377 356 39 25 chr20 69398718 69399002 -2754880 - MER90 LTR ERV1 -7 568 281 385 311 50 19 chr20 69399145 69399524 -2754358 - L1M4 LINE L1 -1113 5033 4643 283 275 99 0 chr20 69400396 69400487 -2753395 - MIR SINE MIR -6 256 157 503 286 120 0 chr20 69400594 69400786 -2753096 + MIR SINE MIR 34 248 -14 465 266 24 0 chr20 69400919 69401050 -2752832 + MIR SINE MIR 59 192 -61 1249 243 129 5 chr20 69401472 69401923 -2751959 - MLT1H LTR MaLR 0 567 13 279 352 68 11 chr20 69402199 69402287 -2751595 + L2 LINE L2 3128 3220 -52 203 293 9 19 chr20 69402304 69402410 -2751472 + GA-rich Low_complexity Low_complexity 3 107 0 331 260 171 0 chr20 69402475 69402598 -2751284 + MIR SINE MIR 76 219 -43 261 284 50 60 chr20 69402921 69403062 -2750820 - L1ME4a LINE L1 -75 6046 5906 2096 126 163 19 chr20 69403062 69403436 -2750446 + MSTA LTR MaLR 1 428 0 261 284 50 60 chr20 69403436 69403495 -2750387 - L1ME4a LINE L1 -215 5906 5848 197 158 20 228 chr20 69403544 69403603 -2750279 + MIR SINE MIR 119 150 -112 1926 145 0 0 chr20 69403603 69403899 -2749983 - AluSx SINE Alu -14 298 3 197 158 20 228 chr20 69403899 69403940 -2749942 + MIR SINE MIR 150 198 -64 247 306 82 0 chr20 69404936 69405034 -2748848 - MIR SINE MIR -54 208 103 277 296 34 11 chr20 69405345 69405433 -2748449 + MIR SINE MIR 34 123 -85 361 161 0 0 chr20 69405621 69405677 -2748205 + MSTA LTR MaLR 373 428 0 497 278 150 38 chr20 69405735 69406048 -2747834 + L1ME3 LINE L1 5482 5829 -333 222 270 0 0 chr20 69406166 69406229 -2747653 + GA-rich Low_complexity Low_complexity 1 63 0 2208 98 0 0 chr20 69407550 69407827 -2746055 + AluSc SINE Alu 1 277 -32 362 349 60 21 chr20 69407984 69408319 -2745563 - L1MC4a LINE L1 -1878 5930 5583 244 291 8 43 chr20 69408519 69408636 -2745246 + L1MC5 LINE L1 7786 7898 -63 1769 178 6 13 chr20 69408646 69408960 -2744922 - AluJb SINE Alu 0 312 1 272 281 0 34 chr20 69409123 69409212 -2744670 - MIR SINE MIR -76 186 101 2980 156 71 2 chr20 69409429 69410018 -2743864 - L1MC2 LINE L1 0 6344 5715 444 307 128 49 chr20 69410112 69410581 -2743301 + L2 LINE L2 2808 3313 0 219 36 0 0 chr20 69411559 69411587 -2742295 + (TG)n Simple_repeat Simple_repeat 2 29 0 440 367 5 5 chr20 69411878 69412074 -2741808 - L1MC2 LINE L1 -438 5683 5488 198 0 0 0 chr20 69412431 69412453 -2741429 + (T)n Simple_repeat Simple_repeat 1 22 0 2182 125 0 3 chr20 69412821 69413126 -2740756 - AluSx SINE Alu -8 304 1 1147 271 31 82 chr20 69414874 69415156 -2738726 - MLT1K LTR MaLR -10 578 336 1536 152 184 53 chr20 69415156 69415326 -2738556 + MSTB LTR MaLR 1 147 -279 2012 114 7 23 chr20 69415326 69415634 -2738248 - AluSx SINE Alu -9 303 1 1536 152 184 53 chr20 69415634 69415837 -2738045 + MSTB LTR MaLR 147 423 -3 1147 271 31 82 chr20 69415837 69416104 -2737778 - MLT1K LTR MaLR -252 336 57 318 324 65 41 chr20 69416081 69416374 -2737508 - MLT1I LTR MaLR -8 401 102 * 22 0 0 0 chr20 69418821 69418843 -2735039 + AT_rich Low_complexity Low_complexity 1 22 0 321 282 99 29 chr20 69418907 69419357 -2734525 - L1ME4a LINE L1 -166 5955 5424 1362 169 175 10 chr20 69419357 69419671 -2734211 - MER47A DNA MER2_type 0 366 1 321 282 99 29 chr20 69419671 69419760 -2734122 - L1ME4a LINE L1 -697 5424 5343 3895 266 90 21 chr20 69421260 69423600 -2730282 - L1ME3 LINE L1 -127 6035 3532 271 333 60 8 chr20 69423742 69423859 -2730023 - L2 LINE L2 0 3313 3191 513 0 0 0 chr20 69424075 69424132 -2729750 + (TG)n Simple_repeat Simple_repeat 2 58 0 1820 134 32 22 chr20 69424135 69424412 -2729470 - AluSx SINE Alu -32 280 1 258 393 9 9 chr20 69424610 69424717 -2729165 + L2 LINE L2 3148 3254 -18 237 108 0 0 chr20 69424862 69424899 -2728983 + (TGAA)n Simple_repeat Simple_repeat 4 40 0 566 250 83 12 chr20 69425133 69425301 -2728581 - L1MD2 LINE L1 -1 6358 6179 287 351 73 11 chr20 69425328 69425519 -2728363 - MIR SINE MIR -40 222 20 342 250 0 0 chr20 69426521 69426601 -2727281 - MER116 DNA Mariner 0 80 1 2331 102 0 0 chr20 69427037 69427331 -2726551 - AluSg1 SINE Alu -15 294 1 770 228 49 15 chr20 69428893 69429125 -2724757 - MIR SINE MIR -8 254 23 245 329 176 0 chr20 69429368 69429584 -2724298 - L2 LINE L2 -215 3057 2804 390 305 91 54 chr20 69429687 69429827 -2724055 - L2 LINE L2 -62 3251 3118 2290 80 0 7 chr20 69429827 69430116 -2723766 + AluY SINE Alu 11 297 -14 390 305 91 54 chr20 69430116 69430382 -2723500 - L2 LINE L2 -195 3118 2830 719 89 18 0 chr20 69430877 69430989 -2722893 + (TTTC)n Simple_repeat Simple_repeat 3 116 0 2086 225 82 6 chr20 69430989 69431514 -2722368 - L1MB7 LINE L1 -12 6172 5608 490 250 62 0 chr20 69431756 69431900 -2721982 - L1MB7 LINE L1 -539 5639 5487 217 325 0 13 chr20 69433335 69433412 -2720470 + L2 LINE L2 3151 3226 -46 355 276 153 27 chr20 69433419 69433680 -2720202 - LTR16C LTR ERVL 0 491 198 857 194 4 0 chr20 69434115 69434378 -2719504 + CT-rich Low_complexity Low_complexity 1 264 0 205 240 0 0 chr20 69434387 69434437 -2719445 - L2 LINE L2 0 3313 3264 1899 161 57 109 chr20 69435353 69435901 -2717981 - L1MB4 LINE L1 -14 6166 5648 1203 112 89 5 chr20 69435894 69436108 -2717774 - L1M4c LINE L1 -3884 2500 2269 * 456 19 0 0 chr20 69436109 69436162 -2717720 + (TA)n Simple_repeat Simple_repeat 2 54 0 1261 174 72 38 chr20 69436171 69436435 -2717447 - AluJo SINE Alu -35 277 5 4080 130 0 2 chr20 69436503 69437095 -2716787 - L1PA15 LINE L1 -2 6163 5573 306 309 154 6 chr20 69439225 69439387 -2714495 + MIR SINE MIR 14 199 -63 630 195 104 62 chr20 69439520 69439761 -2714121 - Charlie1b DNA MER1_type -42 481 231 541 234 141 5 chr20 69439736 69439920 -2713962 - Charlie1b DNA MER1_type -314 209 1 * 623 296 21 0 chr20 69439920 69440109 -2713773 - MIR SINE MIR -64 198 6 578 190 0 43 chr20 69441315 69441431 -2712451 - MER81 DNA DNA -3 111 1 290 267 11 11 chr20 69441975 69442065 -2711817 + LTR67 LTR ERVL 459 548 -9 240 200 0 0 chr20 69442119 69442179 -2711703 + (TCCA)n Simple_repeat Simple_repeat 2 61 0 590 222 56 35 chr20 69442289 69442487 -2711395 - L1ME3 LINE L1 -18 6144 5943 2239 112 7 0 chr20 69443592 69443897 -2709985 - AluSx SINE Alu -5 307 1 330 350 13 6 chr20 69444017 69444174 -2709708 + MIR SINE MIR 16 173 -89 450 283 106 0 chr20 69444389 69444569 -2709313 + L1MC4a LINE L1 5629 5827 -1981 2021 120 10 33 chr20 69444644 69444944 -2708938 - AluJo SINE Alu -19 293 1 241 241 0 0 chr20 69446264 69446318 -2707564 + MIR SINE MIR 123 176 -86 1854 221 45 47 chr20 69446348 69446685 -2707197 - L1MC3 LINE L1 -7 7778 7440 2016 124 7 0 chr20 69446685 69447002 -2706880 - AluSq SINE Alu 0 319 1 1854 221 45 47 chr20 69447002 69447192 -2706690 - L1MC3 LINE L1 -345 7440 7251 908 201 32 36 chr20 69449075 69449294 -2704588 - MER20 DNA MER1_type -1 218 1 1350 110 6 6 chr20 69451993 69452175 -2701707 - AluSg SINE Alu -128 182 1 2262 187 31 15 chr20 69452181 69452968 -2700914 - L1M3 LINE L1 -572 5611 4821 500 292 62 0 chr20 69453482 69453674 -2700208 + L2 LINE L2 2066 2269 -1045 2279 110 0 0 chr20 69454027 69454328 -2699554 - AluSp SINE Alu -12 301 1 2801 178 12 4 chr20 69454452 69454934 -2698948 - MER66B LTR ERV1 0 486 1 293 297 71 63 chr20 69455353 69455622 -2698260 + L2 LINE L2 2421 2691 -623 1414 201 46 106 chr20 69455725 69456139 -2697743 + MLT1C-int LTR MaLR 983 1371 0 792 265 133 27 chr20 69456144 69456556 -2697326 + MLT1C LTR MaLR 6 461 -6 536 302 108 25 chr20 69456603 69456964 -2696918 + L2 LINE L2 2922 3312 -1 557 309 18 8 chr20 69458208 69458432 -2695450 + MIR SINE MIR 36 260 -2 188 305 295 0 chr20 69459256 69459361 -2694521 + L2 LINE L2 3177 3312 -1 483 277 169 24 chr20 69459699 69459948 -2693934 - MER113 DNA MER1_type? -34 487 203 291 148 0 19 chr20 69459941 69459995 -2693887 - Alu SINE Alu -7 295 243 * 365 295 27 82 chr20 69460719 69460902 -2692980 + MIR SINE MIR 27 199 -63 216 333 0 0 chr20 69460921 69460984 -2692898 - L2 LINE L2 -20 3293 3231 315 304 234 17 chr20 69461293 69461592 -2692290 + L2 LINE L2 2949 3312 -1 213 39 0 0 chr20 69461675 69461701 -2692181 + (T)n Simple_repeat Simple_repeat 1 26 0 227 183 133 0 chr20 69462474 69462534 -2691348 + MLT1H LTR MaLR 1 68 -481 284 259 94 89 chr20 69462560 69462784 -2691098 + MLT1H LTR MaLR 130 354 -195 633 253 127 31 chr20 69462995 69463224 -2690658 - MIR SINE MIR -10 252 2 321 26 0 0 chr20 69463709 69463747 -2690135 + (TG)n Simple_repeat Simple_repeat 1 38 0 1085 269 111 56 chr20 69464267 69464642 -2689240 - MLT1K LTR MaLR -8 580 164 1805 179 133 33 chr20 69464642 69465101 -2688781 - MLT1D LTR MaLR 0 505 1 1085 269 111 56 chr20 69465101 69465275 -2688607 - MLT1K LTR MaLR -424 164 1 187 216 108 36 chr20 69466058 69466169 -2687713 - MIR SINE MIR -134 128 10 * 403 365 0 22 chr20 69466164 69466342 -2687540 + MIR SINE MIR 18 191 -71 232 191 0 0 chr20 69466570 69466612 -2687270 + MER113 DNA MER1_type? 261 302 -219 1754 207 14 8 chr20 69467304 69467667 -2686215 + MLT1A1 LTR MaLR 1 365 0 448 291 91 55 chr20 69467861 69468283 -2685599 - MLT1G LTR MaLR -3 587 88 818 161 0 0 chr20 69468310 69468428 -2685454 - FLAM_C SINE Alu -20 123 6 231 36 0 0 chr20 69469097 69469125 -2684757 + (CACCC)n Simple_repeat Simple_repeat 3 30 0 265 270 45 0 chr20 69471305 69471394 -2682488 + MIR3 SINE MIR 87 179 -29 712 241 7 0 chr20 69471797 69471938 -2681944 + MER45A DNA AcHobo 37 178 0 391 170 0 59 chr20 69472736 69472871 -2681011 + CT-rich Low_complexity Low_complexity 4 130 0 321 122 0 0 chr20 69474166 69474215 -2679667 - MLT2D LTR ERVL 0 414 366 1598 193 68 11 chr20 69474339 69474691 -2679191 - MLT2D LTR ERVL -41 373 2 216 0 0 0 chr20 69475325 69475349 -2678533 + (A)n Simple_repeat Simple_repeat 1 24 0 2231 119 0 0 chr20 69475592 69475886 -2677996 + AluSx SINE Alu 1 294 -18 362 320 57 11 chr20 69476049 69476224 -2677658 - MIR SINE MIR -64 198 16 1257 173 0 41 chr20 69476411 69476631 -2677251 - AluJo SINE Alu -17 295 85 421 271 129 19 chr20 69477219 69477429 -2676453 + MIR SINE MIR 12 244 -18 206 357 71 0 chr20 69477545 69477643 -2676239 - L3 LINE CR1 -184 1393 1289 522 217 51 40 chr20 69479657 69479832 -2674050 - MER96B DNA MER1_type? 0 417 241 3129 149 79 15 chr20 69479963 69480560 -2673322 - MER41B LTR ERV1 0 635 1 228 290 0 103 chr20 69481933 69482040 -2671842 - L2 LINE L2 0 3272 3177 189 286 20 0 chr20 69482642 69482691 -2671191 + L2 LINE L2 3213 3262 -10 346 230 48 40 chr20 69483083 69483209 -2670673 - LTR67 LTR ERVL -3 554 428 602 255 77 85 chr20 69484397 69484632 -2669250 - MER102a DNA MER1_type -1 329 97 2189 104 3 7 chr20 69484646 69484935 -2668947 + AluSc SINE Alu 13 300 -9 208 281 37 12 chr20 69485028 69485110 -2668772 + L2 LINE L2 3182 3265 -7 970 298 154 25 chr20 69486647 69487258 -2666624 + MER115 DNA AcHobo 1 690 -3 2345 77 3 55 chr20 69488160 69488486 -2665396 + AluSc SINE Alu 1 309 0 303 253 32 42 chr20 69490170 69490265 -2663617 + Charlie8 DNA MER1_type 27 120 -2297 565 289 190 14 chr20 69492147 69492510 -2661372 - L2 LINE L2 0 3313 2887 320 238 115 33 chr20 69496404 69496526 -2657356 - MER45A DNA AcHobo -39 139 8 532 343 142 38 chr20 69496637 69497110 -2656772 - HAL1 LINE L1 -844 1663 1142 379 248 92 35 chr20 69497290 69497431 -2656451 - MIR SINE MIR -44 218 70 1140 273 143 35 chr20 69497865 69498410 -2655472 - MER21B LTR ERV1 -69 794 191 2483 74 0 0 chr20 69498925 69499221 -2654661 - AluY SINE Alu -15 296 1 246 281 129 36 chr20 69499737 69499961 -2653921 + L2 LINE L2 2733 2977 -337 352 311 10 0 chr20 69500549 69500652 -2653230 + L2 LINE L2 3209 3312 -1 187 254 32 16 chr20 69500670 69500733 -2653149 - L2 LINE L2 -88 3225 3162 2111 121 0 3 chr20 69501213 69501495 -2652387 - AluSx SINE Alu -31 281 1 21 100 0 0 chr20 69501502 69501572 -2652310 + AT_rich Low_complexity Low_complexity 1 70 0 1166 259 116 62 chr20 69501946 69502447 -2651435 - MLT1H LTR MaLR 0 549 22 339 312 161 9 chr20 69502709 69502927 -2650955 + MIR SINE MIR 12 262 0 258 312 92 18 chr20 69504259 69504368 -2649514 + MIR SINE MIR 45 161 -101 253 86 0 0 chr20 69504368 69504403 -2649479 + MLT1F1 LTR MaLR 273 307 -235 498 215 0 19 chr20 69504417 69504524 -2649358 + MLT1F1 LTR MaLR 414 518 -49 610 239 44 0 chr20 69504713 69504893 -2648989 + MER53 DNA DNA 1 188 -1 22 0 0 0 chr20 69504971 69504993 -2648889 + AT_rich Low_complexity Low_complexity 1 22 0 315 361 17 8 chr20 69505024 69505143 -2648739 + L1ME LINE L1 5497 5616 -505 487 161 35 0 chr20 69506144 69506220 -2647662 - ORSL DNA AcHobo 0 275 194 1861 19 0 14 chr20 69506220 69506430 -2647452 - AluYb8 SINE Alu -9 309 103 2391 110 3 0 chr20 69506458 69506768 -2647114 - AluSx SINE Alu -1 311 1 277 65 0 0 chr20 69506768 69506814 -2647068 - ORSL DNA AcHobo -69 206 161 273 207 0 0 chr20 69506854 69506912 -2646970 + MIR SINE MIR 81 138 -70 193 333 25 0 chr20 69507154 69507235 -2646647 - MIR SINE MIR -80 182 100 287 257 27 0 chr20 69507408 69507482 -2646400 + L1MC/D LINE L1 5574 5649 -2159 275 267 23 0 chr20 69508161 69508247 -2645635 - ORSL DNA AcHobo -165 110 23 555 262 84 33 chr20 69508593 69508807 -2645075 + MIR SINE MIR 24 248 -14 273 252 54 38 chr20 69509486 69509608 -2644274 + MIR SINE MIR 42 163 -45 225 317 84 21 chr20 69509675 69509817 -2644065 - L2 LINE L2 -222 3050 2900 600 205 4 8 chr20 69509818 69510328 -2643554 + (TG)n Simple_repeat Simple_repeat 1 508 0 428 243 0 6 chr20 69510365 69510546 -2643336 + (TG)n Simple_repeat Simple_repeat 1 180 0 191 355 72 7 chr20 69511378 69511516 -2642366 - MIR SINE MIR -14 248 102 801 162 58 0 chr20 69511604 69511758 -2642124 - MER20 DNA MER1_type -1 218 56 253 191 0 138 chr20 69511765 69511859 -2642023 - MER20 DNA MER1_type -138 81 1 870 224 81 149 chr20 69512496 69513080 -2640802 + MLT1H LTR MaLR 4 547 -2 197 270 48 0 chr20 69513676 69513739 -2640143 + MIR SINE MIR 106 171 -91 224 293 24 12 chr20 69513832 69513914 -2639968 + MIR SINE MIR 63 145 -117 1721 136 89 14 chr20 69514080 69514406 -2639476 - THE1C LTR MaLR -30 402 1 1539 211 49 3 chr20 69514406 69514732 -2639150 - MLT2C1 LTR ERVL -27 370 30 252 0 0 0 chr20 69514986 69515014 -2638868 + (TG)n Simple_repeat Simple_repeat 1 28 0 476 65 0 140 chr20 69515114 69515207 -2638675 - MADE1 DNA Mariner 0 80 1 1007 223 31 0 chr20 69515512 69515741 -2638141 + MER58B DNA MER1_type 104 339 -2 312 274 32 89 chr20 69515973 69516130 -2637752 + L2 LINE L2 2882 3029 -243 4714 184 38 24 chr20 69516169 69517164 -2636718 - L1MC3 LINE L1 -601 7184 6176 679 243 58 34 chr20 69517819 69518025 -2635857 + MIR SINE MIR 32 242 -20 737 154 3 25 chr20 69518050 69518419 -2635463 + (ATG)n Simple_repeat Simple_repeat 1 360 0 845 249 32 126 chr20 69518573 69519011 -2634871 - LTR16A1 LTR ERVL 0 457 61 264 338 0 0 chr20 69519483 69519563 -2634319 + MIR3 SINE MIR 118 197 -11 252 222 0 32 chr20 69520434 69520497 -2633385 + MIR SINE MIR 116 176 -86 478 136 9 9 chr20 69520589 69520699 -2633183 + (TCCA)n Simple_repeat Simple_repeat 1 110 0 1674 181 7 7 chr20 69521046 69521333 -2632549 + AluJo SINE Alu 18 304 -8 495 277 102 0 chr20 69521971 69522148 -2631734 + Charlie8 DNA MER1_type 75 269 -2148 204 125 0 0 chr20 69522185 69522217 -2631665 + (AGGGGG)n Simple_repeat Simple_repeat 3 34 0 217 270 122 17 chr20 69523645 69523760 -2630122 + MIR SINE MIR 17 143 -119 674 174 29 17 chr20 69524196 69524679 -2629203 + CT-rich Low_complexity Low_complexity 1 489 0 346 170 57 13 chr20 69524709 69524868 -2629014 + CT-rich Low_complexity Low_complexity 1 166 0 262 292 29 88 chr20 69525847 69525894 -2627988 + L2 LINE L2 3142 3190 -82 2141 99 51 0 chr20 69525894 69526186 -2627696 - AluSx SINE Alu -5 307 1 262 292 29 88 chr20 69526186 69526275 -2627607 + L2 LINE L2 3190 3270 -2 287 257 27 0 chr20 69527630 69527704 -2626178 - L1MC3 LINE L1 -2159 5649 5574 224 309 25 0 chr20 69527877 69527958 -2625924 + MIR SINE MIR 100 182 -80 341 200 0 0 chr20 69528197 69528262 -2625620 - MIR SINE MIR -69 139 75 247 271 104 10 chr20 69528354 69528450 -2625432 + MIR SINE MIR 43 147 -115 427 226 10 10 chr20 69529685 69529787 -2624095 - L1MC3 LINE L1 -10 7775 7674 325 238 133 0 chr20 69529788 69529893 -2623989 - MIR SINE MIR -96 166 48 210 360 32 8 chr20 69530501 69530626 -2623256 - MIR SINE MIR -3 259 132 758 258 45 0 chr20 69530635 69530856 -2623026 - L1MD2 LINE L1 -16 6343 6113 303 247 0 39 chr20 69530857 69530934 -2622948 - MIR SINE MIR -108 154 81 366 23 0 0 chr20 69531168 69531211 -2622671 + (TG)n Simple_repeat Simple_repeat 2 44 0 2159 142 10 0 chr20 69532638 69532947 -2620935 + AluSx SINE Alu 1 312 0 250 316 137 5 chr20 69532966 69533178 -2620704 + L2 LINE L2 2732 2971 -343 209 208 65 91 chr20 69533524 69533601 -2620281 - MIR SINE MIR -63 145 71 245 277 53 11 chr20 69535171 69535265 -2618617 - MIR SINE MIR -44 218 121 259 260 82 0 chr20 69535369 69535442 -2618440 - L2 LINE L2 -3 3310 3232 193 341 111 8 chr20 69535722 69535848 -2618034 + L2 LINE L2 3175 3313 0 366 272 7 10 chr20 69535848 69536135 -2617747 + (TGGA)n Simple_repeat Simple_repeat 1 286 0 1167 294 46 16 chr20 69536146 69536592 -2617290 - LTR16A LTR ERVL 0 457 2 473 341 66 4 chr20 69536645 69536903 -2616979 - HERVL LTR ERVL -1102 4552 4279 2347 319 50 55 chr20 69537022 69538717 -2615165 - HERVL LTR ERVL -1281 4204 2518 799 200 87 5 chr20 69539080 69539275 -2614607 - L1MD2 LINE L1 -406 5953 5743 22 0 0 0 chr20 69539335 69539357 -2614525 + AT_rich Low_complexity Low_complexity 1 22 0 2353 199 27 20 chr20 69539555 69540143 -2613739 + HsTC2 DNA Tc2 1307 1898 0 944 177 64 35 chr20 69540473 69540493 -2613389 - L1M3 LINE L1 -576 5607 5589 577 180 9 0 chr20 69540493 69540604 -2613278 - L1MD2 LINE L1 -17 6342 6231 944 177 64 35 chr20 69540604 69540877 -2613005 - L1M3 LINE L1 -594 5589 5325 2228 124 10 0 chr20 69540877 69541175 -2612707 - AluSx SINE Alu -11 301 1 944 177 64 35 chr20 69541175 69541703 -2612179 - L1M3 LINE L1 -858 5325 4640 21 57 0 0 chr20 69541802 69541837 -2612045 + AT_rich Low_complexity Low_complexity 1 35 0 337 304 48 2 chr20 69542454 69542715 -2611167 - MER113 DNA MER1_type? -1 520 208 240 238 10 109 chr20 69542820 69542870 -2611012 + L2 LINE L2 3136 3173 -99 1894 151 3 13 chr20 69542870 69543174 -2610708 - AluJo SINE Alu -11 301 1 240 238 10 109 chr20 69543174 69543224 -2610658 + L2 LINE L2 3173 3226 -46 917 209 33 24 chr20 69544323 69544533 -2609349 - MER20 DNA MER1_type -2 217 6 654 184 29 0 chr20 69545336 69545472 -2608410 + MER103 DNA DNA 20 159 -7 2804 26 3 0 chr20 69548375 69548685 -2605197 + AluY SINE Alu 1 311 0 208 415 0 0 chr20 69549346 69549440 -2604442 - MIR SINE MIR -50 212 119 200 121 30 0 chr20 69550147 69550180 -2603702 + CT-rich Low_complexity Low_complexity 1 34 0 786 157 78 12 chr20 69550345 69550511 -2603371 + MER53 DNA DNA 1 177 -12 277 315 87 0 chr20 69551463 69551555 -2602327 - MIR SINE MIR -107 155 56 272 311 9 28 chr20 69551944 69552050 -2601832 + MIR SINE MIR 65 168 -94 241 341 171 21 chr20 69554732 69555066 -2598816 + L2 LINE L2 2928 3311 -2 226 335 69 23 chr20 69555510 69555683 -2598199 + MER117 DNA MER1_type 3 183 -14 1685 226 43 28 chr20 69556039 69556226 -2597656 - L1MA10 LINE L1 -38 6296 6113 2030 122 24 7 chr20 69556226 69556541 -2597341 + AluSx SINE Alu 1 312 0 1685 226 43 28 chr20 69556541 69556817 -2597065 - L1MA10 LINE L1 -221 6113 5826 2070 96 110 3 chr20 69556905 69557259 -2596623 - L1MA3 LINE L1 0 6305 5914 968 230 12 8 chr20 69558724 69558972 -2594910 - L1MD3 LINE L1 -1 7994 7746 248 271 59 0 chr20 69559930 69560015 -2593867 - L2 LINE L2 -6 3266 3177 940 118 25 19 chr20 69561081 69561242 -2592640 - L1MB7 LINE L1 -18 6166 6005 2014 114 0 3 chr20 69561248 69561537 -2592345 - AluSx SINE Alu -7 305 18 5482 162 35 24 chr20 69561543 69562990 -2590892 - L1PA16 LINE L1 -317 5849 4391 342 0 0 0 chr20 69562990 69563028 -2590854 + (TG)n Simple_repeat Simple_repeat 2 39 0 5482 162 35 24 chr20 69563028 69563316 -2590566 - L1PA16 LINE L1 -1775 4391 4107 314 167 12 24 chr20 69563320 69563404 -2590478 + MER96B DNA MER1_type? 97 179 -238 502 302 99 11 chr20 69565368 69565550 -2588332 - MIR SINE MIR -57 205 8 1953 142 7 7 chr20 69565717 69566027 -2587855 - AluSx SINE Alu -2 310 1 316 172 52 90 chr20 69566029 69566163 -2587719 - MER113 DNA MER1_type? -303 218 90 354 264 48 16 chr20 69566189 69566314 -2587568 - MER113 DNA MER1_type? 0 521 393 5060 213 40 74 chr20 69566332 69567746 -2586136 - L1MD1 LINE L1 -4 6238 4777 899 86 0 0 chr20 69567746 69567863 -2586019 + AluSg/x SINE Alu 180 296 -16 5060 213 40 74 chr20 69567863 69569459 -2584423 - L1MD1 LINE L1 -1465 4777 3222 1025 111 0 0 chr20 69569459 69569594 -2584288 + AluSq/x SINE Alu 1 135 -178 1925 138 3 0 chr20 69569594 69569885 -2583997 + AluSx SINE Alu 1 292 -20 1329 247 33 39 chr20 69569886 69570126 -2583756 - L1MD1 LINE L1 -2915 3231 2991 682 94 0 0 chr20 69570126 69570222 -2583660 - L1MA2 LINE L1 -5 6299 6204 1329 247 33 39 chr20 69570222 69570545 -2583337 - L1MD1 LINE L1 -3155 2991 2712 274 279 27 27 chr20 69570550 69570661 -2583221 - LTR41 LTR ERVL -6 767 657 583 247 18 24 chr20 69571203 69571369 -2582513 - LTR41 LTR ERVL -608 165 1 397 301 116 0 chr20 69571742 69571888 -2581994 - ERVL LTR ERVL -386 5378 5216 * 1746 309 44 48 chr20 69571859 69573040 -2580842 - ERVL LTR ERVL -3770 1994 819 691 339 32 17 chr20 69573085 69573430 -2580452 - ERVL LTR ERVL -5063 701 352 262 283 228 55 chr20 69573747 69573966 -2579916 - LTR41 LTR ERVL -7 766 510 1177 114 105 9 chr20 69574326 69574536 -2579346 - L1MDa LINE L1 -4183 2357 2128 885 147 10 76 chr20 69574536 69574733 -2579149 + AluJb SINE Alu 129 312 0 4918 193 87 34 chr20 69574760 69576052 -2577830 - L1MDa LINE L1 -4413 2127 768 1773 210 48 13 chr20 69576061 69576456 -2577426 + L1ME1 LINE L1 5758 6166 0 318 162 27 81 chr20 69577226 69577300 -2576582 - MIR SINE MIR -101 161 92 410 221 0 126 chr20 69577366 69577493 -2576389 + L2 LINE L2 2893 3003 -310 291 204 0 0 chr20 69577497 69577546 -2576336 + MER81 DNA DNA 59 107 -7 893 259 177 0 chr20 69577648 69577930 -2575952 - MLT1H LTR MaLR -206 343 12 398 182 0 0 chr20 69578441 69578507 -2575375 - L2 LINE L2 0 3313 3248 434 282 163 10 chr20 69578710 69578912 -2574970 - MIR SINE MIR -17 245 13 1071 198 63 119 chr20 69579366 69579855 -2574027 - MLT1C LTR MaLR 0 467 6 1268 161 14 5 chr20 69580063 69580301 -2573581 - AluJo SINE Alu 0 302 63 7443 53 12 1 chr20 69580326 69581956 -2571926 - L1PA8 LINE L1 0 6172 4439 351 248 99 37 chr20 69582337 69582466 -2571416 - MIR SINE MIR -38 170 42 308 292 99 16 chr20 69582976 69583168 -2570714 - LTR33 LTR ERVL -11 510 303 2918 189 78 23 chr20 69583702 69584357 -2569525 - L1MC2 LINE L1 -8 6336 5646 414 169 60 0 chr20 69584405 69584488 -2569394 - L1MB3 LINE L1 -7 6176 6089 808 215 75 5 chr20 69586071 69586257 -2567625 + LTR16C LTR ERVL 262 460 -31 238 304 0 13 chr20 69586405 69586484 -2567398 - MIR SINE MIR -6 256 179 851 273 21 38 chr20 69586877 69587166 -2566716 + MER63B DNA MER1_type 1 284 -152 1731 178 17 36 chr20 69587171 69587531 -2566351 + MLT1A1 LTR MaLR 1 353 -12 4129 181 30 36 chr20 69587603 69588475 -2565407 - L1MB5 LINE L1 -2 6172 5306 1163 102 0 0 chr20 69588475 69588663 -2565219 + AluSg/x SINE Alu 124 311 0 1030 168 72 55 chr20 69588667 69588874 -2565008 - L1MB5 LINE L1 -841 5305 5090 2219 112 0 0 chr20 69588874 69589186 -2564696 + AluSx SINE Alu 1 312 0 1030 168 72 55 chr20 69589186 69589269 -2564613 - L1MB5 LINE L1 -1056 5090 5010 655 175 31 9 chr20 69589275 69589431 -2564451 + MER63 DNA MER1_type 889 1042 -20 2066 97 6 25 chr20 69589467 69589786 -2564096 - AluSq SINE Alu 0 313 1 637 164 36 183 chr20 69590182 69590401 -2563481 - MER53 DNA DNA -2 187 1 238 240 190 0 chr20 69590444 69590544 -2563338 - MIR3 SINE MIR -4 204 86 206 237 79 26 chr20 69590590 69590666 -2563216 - L2 LINE L2 -1 3271 3192 334 224 209 15 chr20 69590685 69590819 -2563063 + MIR SINE MIR 6 165 -97 23 78 0 0 chr20 69592122 69592173 -2561709 + GC_rich Low_complexity Low_complexity 1 51 0 520 240 33 13 chr20 69596282 69596432 -2557450 - L1ME4a LINE L1 -5 6099 5947 1876 110 3 36 chr20 69596756 69597057 -2556825 - AluSx SINE Alu -15 297 7 598 246 128 28 chr20 69597222 69597433 -2556449 - MIR SINE MIR -6 256 25 841 237 24 87 chr20 69598231 69598518 -2555364 + MER102b DNA MER1_type 67 335 -6 248 264 0 55 chr20 69598791 69598882 -2555000 + L2 LINE L2 2921 3006 -307 226 156 22 44 chr20 69598917 69598962 -2554920 - MLT1D LTR MaLR -461 44 1 585 170 0 0 chr20 69598999 69599111 -2554771 + (TCTA)n Simple_repeat Simple_repeat 3 114 0 364 269 49 88 chr20 69599390 69599744 -2554138 - L1ME4a LINE L1 -200 5945 5178 936 279 99 30 chr20 69599754 69600417 -2553465 - L1ME4a LINE L1 -4579 1731 1023 3573 227 28 23 chr20 69600440 69601741 -2552141 - L1ME1 LINE L1 -5 6230 4825 797 245 21 0 chr20 69601745 69601937 -2551945 + L1M4 LINE L1 4726 4921 -1225 626 265 63 0 chr20 69601935 69602124 -2551758 - L1ME1 LINE L1 -6152 244 44 * 202 290 58 14 chr20 69602126 69602195 -2551687 + L2 LINE L2 2606 2677 -637 414 264 115 64 chr20 69602209 69602539 -2551343 - L1ME4a LINE L1 -5187 932 586 316 224 9 84 chr20 69602548 69602655 -2551227 - L1ME4a LINE L1 -5699 420 322 308 252 151 83 chr20 69602995 69603213 -2550669 - L1M4 LINE L1 -940 5206 4974 899 169 7 0 chr20 69603302 69603456 -2550426 - FAM SINE Alu -30 155 1 473 259 69 0 chr20 69603457 69603588 -2550294 + MER58C DNA MER1_type 76 215 0 253 253 40 63 chr20 69605843 69606017 -2547865 - Charlie7 DNA MER1_type -16 2596 2427 * 313 240 73 21 chr20 69605995 69606091 -2547791 - Charlie7 DNA MER1_type -2506 106 6 306 226 108 21 chr20 69606179 69606272 -2547610 - Charlie7 DNA MER1_type -2506 106 6 1040 190 31 5 chr20 69606362 69606557 -2547325 - MER3 DNA MER1_type -4 205 6 367 298 101 11 chr20 69606606 69606784 -2547098 - MIR SINE MIR -6 256 63 214 291 18 0 chr20 69607605 69607660 -2546222 + MIR SINE MIR 79 134 -74 681 240 180 61 chr20 69609576 69610021 -2543861 - MLT1D LTR MaLR 0 505 8 1937 19 0 0 chr20 69610832 69611045 -2542837 + AluYb8 SINE Alu 106 318 0 264 137 0 0 chr20 69611755 69611806 -2542076 + (TG)n Simple_repeat Simple_repeat 2 52 0 26 0 0 0 chr20 69612161 69612187 -2541695 + AT_rich Low_complexity Low_complexity 1 26 0 201 163 23 23 chr20 69613503 69613546 -2540336 + L2 LINE L2 3225 3267 -5 283 218 26 13 chr20 69615226 69615304 -2538578 + U6 snRNA snRNA 1 79 -28 296 211 0 28 chr20 69615544 69615615 -2538267 - MIR SINE MIR -113 149 81 1063 308 42 16 chr20 69615643 69616095 -2537787 + MER113 DNA MER1_type? 9 472 -49 602 77 0 0 chr20 69616410 69616488 -2537394 - AluSg/x SINE Alu -29 281 204 297 0 0 0 chr20 69617138 69617171 -2536711 + (TG)n Simple_repeat Simple_repeat 2 34 0 273 300 106 26 chr20 69617314 69617541 -2536341 - L1ME LINE L1 -396 5774 5530 183 42 0 0 chr20 69617745 69617769 -2536113 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 324 285 99 47 chr20 69618353 69618525 -2535357 - MLT1K LTR MaLR 0 588 408 22 0 0 0 chr20 69618571 69618593 -2535289 + AT_rich Low_complexity Low_complexity 1 22 0 263 309 105 47 chr20 69618596 69618747 -2535135 - MLT1K LTR MaLR -327 261 95 1936 124 0 0 chr20 69618747 69619012 -2534870 + AluSx SINE Alu 42 306 -6 263 309 105 47 chr20 69619012 69619051 -2534831 - MLT1K LTR MaLR -493 95 60 263 223 72 93 chr20 69619295 69619434 -2534448 - L2 LINE L2 -21 3251 3116 672 258 119 8 chr20 69620438 69620682 -2533200 - MER113 DNA MER1_type? -43 478 208 206 219 183 24 chr20 69620845 69620927 -2532955 + MIR SINE MIR 51 145 -117 186 43 0 0 chr20 69622196 69622219 -2531663 + (GGCTG)n Simple_repeat Simple_repeat 4 26 0 23 33 0 0 chr20 69622386 69622416 -2531466 + GC_rich Low_complexity Low_complexity 1 30 0 354 354 14 0 chr20 69623489 69623633 -2530249 + MIR SINE MIR 13 158 -104 234 250 49 90 chr20 69623732 69623876 -2530006 - Charlie8 DNA MER1_type -2278 139 2 594 258 110 19 chr20 69625794 69626003 -2527879 - MLT1K LTR MaLR -17 571 344 248 197 0 76 chr20 69626318 69626384 -2527498 + LTR16A1 LTR ERVL 2 62 -395 322 262 12 0 chr20 69626388 69626472 -2527410 + LTR16A1 LTR ERVL 333 417 -40 258 263 131 10 chr20 69627820 69627919 -2525963 - MIR SINE MIR -120 142 32 492 263 112 64 chr20 69628126 69628377 -2525505 - MLT1H LTR MaLR 0 549 280 3768 138 23 5 chr20 69628663 69629306 -2524576 - L1MA4 LINE L1 -13 6287 5633 858 222 9 50 chr20 69629306 69629527 -2524355 - MLT1H LTR MaLR -337 212 1 248 314 86 68 chr20 69629582 69629919 -2523963 - MLT1L LTR MaLR -59 543 110 291 258 0 0 chr20 69630017 69630106 -2523776 - MER113 DNA MER1_type? -337 184 96 560 194 31 23 chr20 69630138 69630267 -2523615 - MER58A DNA MER1_type -5 219 90 1211 146 0 44 chr20 69630267 69630496 -2523386 + AluSq SINE Alu 103 313 0 262 88 0 0 chr20 69630496 69630530 -2523352 - MER58A DNA MER1_type -18 89 56 466 271 0 0 chr20 69630531 69630627 -2523255 - MER58A DNA MER1_type -11 96 1 1331 275 45 38 chr20 69630814 69631286 -2522596 - MLT1J LTR MaLR -36 475 1 204 296 96 56 chr20 69632635 69632760 -2521122 - L2 LINE L2 0 3313 3184 487 290 82 17 chr20 69632831 69632970 -2520912 - MIR SINE MIR 0 262 133 450 0 0 0 chr20 69632970 69633020 -2520862 + (CA)n Simple_repeat Simple_repeat 1 50 0 198 91 0 0 chr20 69633021 69633054 -2520828 + (CAGAGA)n Simple_repeat Simple_repeat 2 34 0 487 290 82 17 chr20 69633054 69633143 -2520739 - MIR SINE MIR -128 134 17 435 256 34 0 chr20 69634300 69634417 -2519465 + MER45A DNA AcHobo 58 178 0 2318 201 54 15 chr20 69634737 69635258 -2518624 - L1MC3 LINE L1 0 7785 7245 419 146 0 12 chr20 69636422 69636504 -2517378 - AluJb SINE Alu -2 310 230 * 772 143 58 65 chr20 69636498 69636652 -2517230 - AluJb SINE Alu -149 163 11 2044 92 48 0 chr20 69637330 69637602 -2516280 - AluSx SINE Alu -20 292 8 689 186 138 6 chr20 69637895 69638062 -2515820 + MER53 DNA DNA 1 189 0 2427 68 17 0 chr20 69639525 69639820 -2514062 - AluSx SINE Alu -12 300 1 2513 25 0 3 chr20 69640495 69640807 -2513075 + AluY SINE Alu 1 311 0 304 299 96 41 chr20 69644622 69644913 -2508969 - L1MC4a LINE L1 -1814 5994 5688 457 294 133 32 chr20 69645134 69645443 -2508439 + MER102b DNA MER1_type 2 341 0 599 190 108 13 chr20 69645452 69645610 -2508272 - MER20 DNA MER1_type -1 218 46 242 284 54 101 chr20 69647310 69647458 -2506424 + L2 LINE L2 3117 3257 -15 268 338 35 14 chr20 69648772 69648917 -2504965 + L2 LINE L2 2530 2677 -637 239 350 102 12 chr20 69648949 69649203 -2504679 + L2 LINE L2 2804 3080 -233 226 388 8 0 chr20 69649431 69649560 -2504322 + L2 LINE L2 3143 3272 0 428 347 44 13 chr20 69649761 69649986 -2503896 + HAL1 LINE L1 3 234 -2273 2344 251 89 40 chr20 69650015 69650942 -2502940 + HAL1 LINE L1 320 1292 -1215 901 184 74 9 chr20 69650919 69651136 -2502746 + L1MA8 LINE L1 6019 6249 -42 * 1557 261 188 48 chr20 69651138 69652231 -2501651 + HAL1 LINE L1 1263 2507 0 211 266 75 53 chr20 69656500 69656594 -2497288 + MIR3 SINE MIR 79 174 -34 359 196 0 65 chr20 69659734 69659841 -2494041 + MER113 DNA MER1_type? 8 107 -414 226 182 61 61 chr20 69659955 69660021 -2493861 + MER113 DNA MER1_type? 453 518 -3 426 39 0 0 chr20 69660962 69661014 -2492868 + (CA)n Simple_repeat Simple_repeat 2 53 0 305 321 46 0 chr20 69661121 69661230 -2492652 + L2 LINE L2 3159 3272 0 1650 94 0 5 chr20 69661303 69661515 -2492367 - AluSx SINE Alu -5 305 95 346 215 0 65 chr20 69661775 69661882 -2492000 + MER113 DNA MER1_type? 8 107 -414 720 119 0 20 chr20 69662272 69662373 -2491509 - AluSx SINE Alu -213 100 2 231 245 128 98 chr20 69662481 69662685 -2491197 - L2 LINE L2 -5 3308 3099 476 227 58 65 chr20 69663142 69663296 -2490586 + MER20 DNA MER1_type 67 219 0 183 269 247 0 chr20 69663794 69663887 -2489995 - MIR SINE MIR -59 149 34 208 298 0 18 chr20 69664534 69664591 -2489291 - L2 LINE L2 -1 3271 3216 1077 236 151 24 chr20 69664866 69665197 -2488685 - LTR16A LTR ERVL 0 450 78 1026 144 0 0 chr20 69665277 69665457 -2488425 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 892 154 11 0 chr20 69665463 69665638 -2488244 + CT-rich Low_complexity Low_complexity 2 178 0 219 240 0 0 chr20 69665647 69665697 -2488185 - L2 LINE L2 0 3313 3264 1952 159 57 109 chr20 69666613 69667161 -2486721 - L1MB4 LINE L1 -14 6166 5648 1220 112 89 5 chr20 69667154 69667368 -2486514 - L1M4c LINE L1 -3884 2500 2269 * 330 26 0 0 chr20 69667369 69667408 -2486474 + (TA)n Simple_repeat Simple_repeat 2 40 0 1242 174 72 38 chr20 69667417 69667681 -2486201 - AluJo SINE Alu -35 277 5 4254 130 0 2 chr20 69667749 69668341 -2485541 - L1PA15 LINE L1 -2 6163 5573 204 349 47 38 chr20 69670164 69670270 -2483612 - L2 LINE L2 -22 3250 3144 352 314 113 39 chr20 69670471 69670675 -2483207 + MIR SINE MIR 14 232 -30 652 195 104 62 chr20 69670766 69671007 -2482875 - Charlie1b DNA MER1_type -42 481 231 544 234 141 5 chr20 69670982 69671166 -2482716 - Charlie1b DNA MER1_type -314 209 1 * 674 296 21 0 chr20 69671166 69671355 -2482527 - MIR SINE MIR -64 198 6 617 190 0 43 chr20 69672561 69672677 -2481205 - MER81 DNA DNA -3 111 1 288 267 11 11 chr20 69673221 69673311 -2480571 + LTR67 LTR ERVL 459 548 -9 240 200 0 0 chr20 69673365 69673425 -2480457 + (TCCA)n Simple_repeat Simple_repeat 2 61 0 595 222 56 35 chr20 69673535 69673733 -2480149 - L1ME3 LINE L1 -18 6144 5943 395 352 48 19 chr20 69674332 69674542 -2479340 - L2 LINE L2 -654 2660 2445 2180 117 0 20 chr20 69725993 69726293 -2427589 - AluSx SINE Alu -17 295 2 5040 87 44 0 chr20 69726616 69727248 -2426634 - PABL_A LTR ERV1 0 660 1 443 218 0 0 chr20 69727294 69727372 -2426510 + MER21B LTR ERV1 20 97 -766 239 282 113 8 chr20 69727392 69727516 -2426366 + MER21A LTR ERV1 748 884 -47 239 164 16 49 chr20 69727562 69727623 -2426259 + MER113 DNA MER1_type? 133 191 -330 366 156 0 0 chr20 69727904 69727968 -2425914 + CT-rich Low_complexity Low_complexity 4 67 0 2067 128 14 0 chr20 69727985 69728282 -2425600 - AluSx SINE Alu -11 301 1 1070 159 0 0 chr20 69728293 69728450 -2425432 - AluJb SINE Alu -19 293 137 919 154 39 48 chr20 69728581 69728789 -2425093 + MER20 DNA MER1_type 14 219 0 369 320 52 62 chr20 69728813 69729104 -2424778 + L2 LINE L2 2812 3099 -173 244 136 11 45 chr20 69729841 69729929 -2423953 + (TA)n Simple_repeat Simple_repeat 2 86 0 2257 114 3 0 chr20 69729945 69730253 -2423629 - AluSx SINE Alu -3 309 1 748 125 36 0 chr20 69730847 69731099 -2422783 - FLAM_C SINE Alu 0 256 1 2267 117 0 7 chr20 69731666 69731975 -2421907 - AluSx SINE Alu -5 307 1 305 270 135 0 chr20 69732322 69732411 -2421471 + L2 LINE L2 3212 3312 -1 586 304 89 41 chr20 69733622 69733708 -2420174 + L1ME LINE L1 4309 4389 -1757 2266 108 7 0 chr20 69733708 69734004 -2419878 + AluSx SINE Alu 1 298 -14 586 304 89 41 chr20 69734004 69734602 -2419280 + L1ME LINE L1 4389 5026 -1120 1985 138 7 7 chr20 69734745 69735036 -2418846 + AluSx SINE Alu 1 291 -21 180 0 0 0 chr20 69735036 69735056 -2418826 + (TA)n Simple_repeat Simple_repeat 2 21 0 944 272 127 21 chr20 69735070 69735506 -2418376 + L1ME LINE L1 5295 5751 -370 2705 35 0 0 chr20 69735898 69736209 -2417673 - AluY SINE Alu 0 311 1 353 309 44 82 chr20 69737370 69737758 -2416124 + L1 LINE L1 2170 2542 -3604 383 302 110 59 chr20 69737828 69738529 -2415353 + L1 LINE L1 2679 3445 -2701 21 57 0 0 chr20 69738618 69738653 -2415229 + AT_rich Low_complexity Low_complexity 1 35 0 350 229 124 26 chr20 69738770 69738923 -2414959 + L1 LINE L1 3771 3938 -2208 22 23 0 45 chr20 69738962 69738986 -2414896 + AT_rich Low_complexity Low_complexity 1 24 -18 2128 137 0 0 chr20 69738986 69739292 -2414590 - AluSx SINE Alu -6 306 1 22 23 0 45 chr20 69739292 69739311 -2414571 + AT_rich Low_complexity Low_complexity 24 42 0 2017 125 0 14 chr20 69739314 69739632 -2414250 + AluJb SINE Alu 1 314 0 370 236 20 177 chr20 69740212 69740415 -2413467 + MER69 DNA AcHobo 3 2522 -4 2367 96 3 3 chr20 69740465 69740777 -2413105 + AluSq SINE Alu 1 312 -1 3191 84 10 2 chr20 69740819 69741235 -2412647 + L1PA8 LINE L1 5754 6172 0 2108 131 0 0 chr20 69741479 69741777 -2412105 - AluSx SINE Alu -14 298 1 1936 118 33 0 chr20 69741854 69742125 -2411757 + AluSg SINE Alu 16 295 -15 519 294 32 27 chr20 69742678 69742865 -2411017 + MIR SINE MIR 3 190 -72 267 149 85 0 chr20 69742931 69742978 -2410904 + MIR SINE MIR 119 169 -93 193 248 91 74 chr20 69743010 69743131 -2410751 - L2 LINE L2 0 3272 3150 336 322 23 23 chr20 69743320 69743534 -2410348 + L1ME4a LINE L1 5684 5897 -224 331 181 96 32 chr20 69743728 69743822 -2410060 - L1ME3 LINE L1 0 6162 6071 410 184 12 35 chr20 69743864 69743980 -2409902 - L1ME3 LINE L1 -19 6145 6041 2314 86 3 7 chr20 69745959 69746262 -2407620 - AluSx SINE Alu -10 302 1 23 0 0 0 chr20 69746761 69746784 -2407098 + AT_rich Low_complexity Low_complexity 1 23 0 365 263 61 31 chr20 69747324 69747582 -2406300 + L1ME LINE L1 1304 1515 -4908 310 276 0 0 chr20 69747607 69747691 -2406191 - L1M4 LINE L1 -1998 4148 4065 245 246 0 0 chr20 69747717 69747774 -2406108 + L1ME3 LINE L1 6104 6160 -2 189 0 0 0 chr20 69748588 69748609 -2405273 + (T)n Simple_repeat Simple_repeat 1 21 0 1530 215 44 0 chr20 69748852 69749168 -2404714 + MER58B DNA MER1_type 4 333 -8 2188 181 43 18 chr20 69749171 69749618 -2404264 + MLT1C LTR MaLR 1 365 -9 23 0 0 0 chr20 69749940 69749963 -2403919 + AT_rich Low_complexity Low_complexity 1 23 0 272 288 56 32 chr20 69750893 69751018 -2402864 + L2 LINE L2 3143 3270 -2 983 151 5 16 chr20 69751189 69751374 -2402508 + MER96B DNA MER1_type? 37 219 -198 2372 93 0 0 chr20 69751378 69751679 -2402203 - AluSg SINE Alu -9 301 1 254 286 60 12 chr20 69751711 69751795 -2402087 + MLT1K LTR MaLR 311 398 -190 836 292 37 25 chr20 69752093 69752415 -2401467 - MLT1K LTR MaLR -5 583 258 * 913 151 9 101 chr20 69752400 69752509 -2401373 - MER96B DNA MER1_type? -214 203 122 2371 97 0 3 chr20 69752509 69752809 -2401073 + AluSx SINE Alu 1 299 -13 913 151 9 101 chr20 69752809 69752918 -2400964 - MER96B DNA MER1_type? -295 122 5 1494 226 66 42 chr20 69752989 69753445 -2400437 + MLT1C LTR MaLR 1 467 0 221 204 41 0 chr20 69754191 69754240 -2399642 + L2 LINE L2 3221 3271 -1 295 329 58 58 chr20 69756507 69756799 -2397083 - L2 LINE L2 -96 3217 2926 287 151 0 38 chr20 69757021 69757074 -2396808 - FRAM/FAM SINE Alu -124 51 1 1657 145 14 35 chr20 69757354 69757689 -2396193 - AluJo SINE Alu 0 329 1 334 324 21 14 chr20 69758148 69758290 -2395592 - LTR67 LTR ERVL 0 557 415 679 154 23 29 chr20 69758628 69758803 -2395079 + GA-rich Low_complexity Low_complexity 4 177 0 242 213 0 27 chr20 69758790 69758865 -2395017 + G-rich Low_complexity Low_complexity 1 73 0 * 2366 78 0 0 chr20 69759990 69760284 -2393598 - AluSg SINE Alu -16 294 1 1842 163 0 7 chr20 69760501 69760795 -2393087 - AluSx SINE Alu -20 292 1 2344 116 0 0 chr20 69761171 69761481 -2392401 - AluSx SINE Alu -2 310 1 498 304 63 33 chr20 69761486 69761732 -2392150 + L1ME4a LINE L1 5557 5815 -306 3991 178 17 11 chr20 69761732 69762480 -2391402 + L1MB5 LINE L1 5413 6165 -9 498 304 63 33 chr20 69762480 69762536 -2391346 + L1ME4a LINE L1 5815 5868 -253 2456 18 4 0 chr20 69762567 69762839 -2391043 + L1PA4 LINE L1 5880 6152 -3 303 258 14 74 chr20 69762906 69763123 -2390759 + L1ME4a LINE L1 5917 6120 -1 194 271 0 0 chr20 69763959 69764007 -2389875 - L2 LINE L2 0 3313 3266 394 308 64 23 chr20 69764235 69764407 -2389475 - MIR SINE MIR -1 261 83 661 229 35 30 chr20 69765135 69765336 -2388546 - MER113 DNA MER1_type? -319 202 1 29 28 0 0 chr20 69765358 69765394 -2388488 + AT_rich Low_complexity Low_complexity 1 36 0 1015 164 6 6 chr20 69765656 69765821 -2388061 + AluJb SINE Alu 137 301 -11 359 99 12 148 chr20 69765874 69765955 -2387927 + AluJ/FRAM SINE Alu 220 289 -13 2269 98 0 3 chr20 69765965 69766251 -2387631 + AluSc SINE Alu 13 297 -12 1123 214 14 0 chr20 69767909 69768129 -2385753 + MER58A DNA MER1_type 2 224 0 184 333 0 0 chr20 69769259 69769313 -2384569 + MIR SINE MIR 83 136 -72 278 328 111 55 chr20 69769441 69769501 -2384381 - L3 LINE CR1 -742 835 780 2357 116 0 0 chr20 69769501 69769811 -2384071 - AluSx SINE Alu -2 310 1 278 328 111 55 chr20 69769811 69770021 -2383861 - L3 LINE CR1 -797 780 550 2914 166 68 0 chr20 69770946 69771489 -2382393 - L1MB5 LINE L1 -8 6166 5587 634 168 63 0 chr20 69771498 69771641 -2382241 - L1MB5 LINE L1 -816 5330 5179 606 269 44 9 chr20 69771673 69771891 -2381991 - L1ME1 LINE L1 -5 6161 5931 1983 156 0 0 chr20 69772295 69772597 -2381285 + AluJb SINE Alu 1 302 -10 189 372 66 8 chr20 69773109 69773230 -2380652 + L2 LINE L2 3121 3248 -24 257 264 66 0 chr20 69773474 69773565 -2380317 + L1MC4 LINE L1 7634 7730 -312 1148 192 78 26 chr20 69773638 69773937 -2379945 + L1MC4 LINE L1 7665 8040 -2 571 134 113 0 chr20 69774387 69774484 -2379398 + FLAM_C SINE Alu 2 109 -34 543 274 79 11 chr20 69774653 69774843 -2379039 - MIR SINE MIR -26 236 34 222 313 0 0 chr20 69774859 69774923 -2378959 + MIR SINE MIR 199 262 0 565 197 120 16 chr20 69774980 69775226 -2378656 + MER33 DNA MER1_type 1 326 -37 238 361 101 12 chr20 69775905 69776232 -2377650 + L2 LINE L2 2303 2658 -656 234 263 0 0 chr20 69776688 69776745 -2377137 + L2 LINE L2 3256 3312 -1 207 0 0 0 chr20 69776980 69777003 -2376879 + (TTA)n Simple_repeat Simple_repeat 2 24 0 2403 97 3 0 chr20 69777137 69777448 -2376434 - AluSx SINE Alu 0 312 1 22 35 0 0 chr20 69778292 69778321 -2375561 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr20 69779022 69779043 -2374839 + AT_rich Low_complexity Low_complexity 1 21 0 6735 124 26 9 chr20 69779044 69780059 -2373823 - L1MC1 LINE L1 -5 6328 5294 2297 100 7 0 chr20 69780059 69780368 -2373514 - AluSq SINE Alu -2 311 1 6735 124 26 9 chr20 69780368 69780400 -2373482 - L1MC1 LINE L1 -1039 5294 5264 1589 169 7 3 chr20 69780411 69780701 -2373181 - L1MA7 LINE L1 0 6291 6001 4828 104 6 13 chr20 69780701 69781360 -2372522 - L1PA13 LINE L1 -8 6155 5498 2315 109 7 0 chr20 69781360 69781664 -2372218 - AluSx SINE Alu -6 306 1 4828 104 6 13 chr20 69781664 69781693 -2372189 - L1PA13 LINE L1 -665 5498 5470 1203 172 13 0 chr20 69781698 69781925 -2371957 - L1 LINE L1 -1752 5813 5584 225 133 13 107 chr20 69781892 69781967 -2371915 - L1MCa LINE L1 -4135 3430 3363 * 1031 186 21 81 chr20 69781986 69782319 -2371563 - L1MC1 LINE L1 -870 5276 4964 4512 131 11 42 chr20 69782321 69783123 -2370759 - L1MCa LINE L1 -5076 2489 1713 3124 144 76 9 chr20 69783154 69783718 -2370164 - L1MCa LINE L1 -5783 1782 1181 591 272 43 0 chr20 69783873 69784057 -2369825 + MIR SINE MIR 33 224 -38 308 252 160 17 chr20 69784131 69784250 -2369632 - L2 LINE L2 -189 3083 2948 320 341 52 12 chr20 69784315 69784488 -2369394 - L2 LINE L2 -8 3305 3126 351 225 72 63 chr20 69784722 69784944 -2368938 + MER113 DNA MER1_type? 1 224 -297 250 254 102 17 chr20 69785649 69785767 -2368115 - LTR68 LTR ERV1 -606 134 7 237 273 26 0 chr20 69785899 69785976 -2367906 - MIR SINE MIR -68 140 62 807 223 30 0 chr20 69785988 69786154 -2367728 + MER20 DNA MER1_type 1 171 -48 184 339 78 31 chr20 69787547 69787739 -2366143 + L2 LINE L2 2812 3012 -260 497 261 131 77 chr20 69787742 69788132 -2365750 - MLT1J LTR MaLR -1 510 100 252 270 0 14 chr20 69788281 69788355 -2365527 - L1MC4a LINE L1 -1889 5919 5847 * 1013 236 48 29 chr20 69788350 69788442 -2365440 - L1MC4a LINE L1 -589 5575 5486 2150 125 0 3 chr20 69788442 69788747 -2365135 - AluSx SINE Alu -8 304 1 1013 236 48 29 chr20 69788747 69789095 -2364787 - L1MC4a LINE L1 -678 5486 5123 1839 225 60 5 chr20 69789124 69789560 -2364322 - MLT1C LTR MaLR 0 467 8 308 276 51 0 chr20 69789751 69789849 -2364033 - MLT1L LTR MaLR -20 595 493 443 318 55 25 chr20 69790889 69791125 -2362757 - MIR SINE MIR 0 262 20 887 256 50 4 chr20 69791291 69791553 -2362329 + L1MC4a LINE L1 5705 5978 -1830 302 219 58 0 chr20 69791568 69791723 -2362159 + (TA)n Simple_repeat Simple_repeat 1 164 0 531 326 80 55 chr20 69791783 69792310 -2361572 + L1MC4a LINE L1 6054 6593 -1215 1578 217 92 136 chr20 69792414 69792922 -2360960 + L1MC5 LINE L1 6625 7154 -807 1838 142 0 85 chr20 69792922 69793253 -2360629 + AluJb SINE Alu 1 303 -9 1578 217 92 136 chr20 69793253 69793934 -2359948 + L1MC5 LINE L1 7154 7761 -200 347 163 8 10 chr20 69795518 69795770 -2358112 + AluJo SINE Alu 10 302 0 424 259 93 21 chr20 69795904 69796069 -2357813 + L1MC5 LINE L1 7745 8038 -4 28 0 0 0 chr20 69796073 69796101 -2357781 + AT_rich Low_complexity Low_complexity 1 28 0 233 337 11 11 chr20 69796371 69796463 -2357419 + MIR SINE MIR 19 110 -152 1167 214 39 96 chr20 69796557 69796964 -2356918 + MLT1B LTR MaLR 1 384 -6 455 310 29 0 chr20 69797222 69797396 -2356486 + (CA)n Simple_repeat Simple_repeat 2 180 0 494 293 29 0 chr20 69797415 69797589 -2356293 + (CA)n Simple_repeat Simple_repeat 1 179 0 273 296 17 45 chr20 69797544 69797720 -2356162 + (CATATA)n Simple_repeat Simple_repeat 6 176 0 * 195 147 0 73 chr20 69797741 69797809 -2356073 + (CATA)n Simple_repeat Simple_repeat 4 66 0 294 176 78 0 chr20 69801463 69801514 -2352368 + MLT1K LTR MaLR 532 586 -2 1628 185 98 83 chr20 69802241 69802782 -2351100 + MLT1H LTR MaLR 1 549 0 566 323 57 8 chr20 69803436 69803684 -2350198 + MIR SINE MIR 3 262 0 237 330 19 9 chr20 69803936 69804042 -2349840 - MIR SINE MIR -64 144 38 676 300 78 45 chr20 69805767 69806213 -2347669 + MLT1L LTR MaLR 132 592 -23 217 248 233 31 chr20 69806251 69806380 -2347502 + MER5A DNA MER1_type 29 183 -6 676 314 166 14 chr20 69807348 69808339 -2345543 + L2 LINE L2 1681 2822 -492 332 264 103 19 chr20 69809088 69809243 -2344639 - L1ME2 LINE L1 0 6164 5997 353 234 45 9 chr20 69809257 69809368 -2344514 - L2 LINE L2 -247 3066 2952 2346 85 0 19 chr20 69809606 69809922 -2343960 - AluSx SINE Alu -2 310 1 368 279 36 0 chr20 69809922 69810033 -2343849 - L1MD3 LINE L1 -17 7978 7864 209 159 23 0 chr20 69810063 69810107 -2343775 + (TG)n Simple_repeat Simple_repeat 2 46 0 1007 216 134 57 chr20 69810107 69810203 -2343679 - L1MD2 LINE L1 -199 6160 6073 2189 94 14 0 chr20 69810203 69810503 -2343379 + AluSx SINE Alu 1 304 0 1007 216 134 57 chr20 69810503 69810793 -2343089 - L1MD2 LINE L1 -286 6073 5743 273 279 0 0 chr20 69810914 69810993 -2342889 + MIR SINE MIR 117 195 -67 297 279 127 5 chr20 69811682 69811879 -2342003 + MIR SINE MIR 28 248 -14 322 296 80 65 chr20 69812772 69813262 -2340620 - L1ME4a LINE L1 -1 6120 5624 460 283 107 29 chr20 69813267 69813541 -2340341 - L1ME4a LINE L1 -709 5462 5296 305 218 103 0 chr20 69815195 69815282 -2338600 + L2 LINE L2 3175 3270 -2 620 267 19 6 chr20 69815610 69815771 -2338111 + MIR SINE MIR 25 187 -75 231 326 61 0 chr20 69815900 69815998 -2337884 - MIR SINE MIR -74 188 85 733 194 13 39 chr20 69816008 69816163 -2337719 - MLT1E2 LTR MaLR -10 616 466 748 174 14 7 chr20 69816163 69816301 -2337581 + FLAM_C SINE Alu 1 139 -4 2460 69 0 0 chr20 69816308 69816598 -2337284 + AluY SINE Alu 1 290 -21 289 243 57 14 chr20 69816600 69816646 -2337236 + AluSp SINE Alu 127 175 -128 539 68 81 0 chr20 69816646 69816720 -2337162 + MADE1 DNA Mariner 1 80 0 879 134 0 0 chr20 69816720 69816839 -2337043 + FRAM SINE Alu 35 153 -23 1423 205 29 58 chr20 69816839 69817249 -2336633 - MLT1E2 LTR MaLR -153 473 76 442 299 13 7 chr20 69817132 69817286 -2336596 - MLT2C1 LTR ERVL -199 198 44 * 1434 273 80 18 chr20 69817596 69818047 -2335835 + MLT1J LTR MaLR 3 481 -30 962 287 127 19 chr20 69819369 69819738 -2334144 + MLT1I LTR MaLR 1 409 0 2337 81 13 13 chr20 69819865 69820173 -2333709 - AluSx SINE Alu -2 310 3 2366 87 0 0 chr20 69823682 69823969 -2329913 - AluSg SINE Alu -23 287 1 204 235 0 0 chr20 69825941 69825992 -2327890 + A-rich Low_complexity Low_complexity 1 51 0 22 35 0 0 chr20 69828291 69828320 -2325562 + AT_rich Low_complexity Low_complexity 1 29 0 233 274 235 0 chr20 69828755 69828857 -2325025 + L1P LINE L1 4878 5003 -1143 2405 57 0 0 chr20 69830709 69830990 -2322892 + AluY SINE Alu 19 299 -12 401 255 56 61 chr20 69831373 69831604 -2322278 - L2 LINE L2 -96 3217 2988 2035 91 3 54 chr20 69831659 69831982 -2321900 + AluSx SINE Alu 1 308 0 357 186 12 12 chr20 69831982 69832068 -2321814 - MIR SINE MIR -11 251 166 430 224 90 8 chr20 69832365 69832499 -2321383 - MLT1L LTR MaLR -1 614 470 311 111 0 19 chr20 69832736 69832790 -2321092 + (TCCC)n Simple_repeat Simple_repeat 4 56 0 1928 165 0 3 chr20 69832802 69833099 -2320783 - AluSx SINE Alu -16 296 1 2259 117 3 0 chr20 69833144 69833453 -2320429 - AluSq SINE Alu -1 312 3 303 339 21 21 chr20 69833574 69833763 -2320119 + L1M4 LINE L1 3338 3526 -2620 614 239 38 6 chr20 69833774 69833933 -2319949 + L1ME3A LINE L1 5987 6150 -20 22 0 0 0 chr20 69833933 69833955 -2319927 + AT_rich Low_complexity Low_complexity 1 22 0 583 295 69 51 chr20 69833960 69834644 -2319238 + L1M4 LINE L1 3510 4205 -1941 1868 83 115 18 chr20 69834648 69834926 -2318956 + AluSc SINE Alu 4 308 -1 942 207 0 0 chr20 69834926 69835090 -2318792 + AluJb SINE Alu 134 297 -15 926 170 7 7 chr20 69835222 69835369 -2318513 + FRAM SINE Alu 5 151 -15 22 0 0 0 chr20 69835369 69835391 -2318491 + AT_rich Low_complexity Low_complexity 1 22 0 830 160 0 0 chr20 69835399 69835530 -2318352 + AluJo SINE Alu 1 131 -171 2305 112 0 13 chr20 69835588 69835900 -2317982 + AluSg SINE Alu 1 308 -2 374 213 61 73 chr20 69835929 69836093 -2317789 - L1MC5 LINE L1 -407 7554 7393 461 204 159 40 chr20 69836154 69836330 -2317552 + L1MC5 LINE L1 7611 7807 -154 580 244 17 0 chr20 69836383 69836502 -2317380 + MER63A DNA MER1_type 53 173 -37 390 231 0 0 chr20 69836527 69836605 -2317277 + L1MC5 LINE L1 7808 7885 -76 856 200 38 0 chr20 69836652 69836812 -2317070 + AluJo SINE Alu 137 302 0 1847 154 0 39 chr20 69836892 69837198 -2316684 + AluJb SINE Alu 1 294 -18 494 214 151 117 chr20 69837229 69837347 -2316535 - MIR SINE MIR -15 247 118 2354 100 7 0 chr20 69837347 69837656 -2316226 + AluSx SINE Alu 1 311 -1 494 214 151 117 chr20 69837656 69837743 -2316139 - MIR SINE MIR -144 118 35 453 171 105 0 chr20 69837782 69837887 -2315995 - LTR9B LTR ERV1 -84 560 445 423 313 135 39 chr20 69838297 69838652 -2315230 - L2 LINE L2 -1 3312 2924 200 329 0 0 chr20 69838867 69838940 -2314942 + L2 LINE L2 3236 3308 -5 1887 117 0 29 chr20 69840556 69840829 -2313053 + AluSx SINE Alu 42 306 -6 195 42 0 0 chr20 69841350 69841374 -2312508 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 305 309 94 17 chr20 69841484 69841665 -2312217 + L1M4 LINE L1 4065 4259 -1887 259 178 27 62 chr20 69841983 69842129 -2311753 + (TTATA)n Simple_repeat Simple_repeat 4 144 0 235 143 14 29 chr20 69842159 69842229 -2311653 + (TTATA)n Simple_repeat Simple_repeat 5 73 0 266 153 17 0 chr20 69842303 69842362 -2311520 + (TTATA)n Simple_repeat Simple_repeat 5 64 0 212 204 0 19 chr20 69842459 69842513 -2311369 + (TTATA)n Simple_repeat Simple_repeat 1 53 0 320 280 51 0 chr20 69842524 69842642 -2311240 - MIR SINE MIR -123 139 16 233 197 13 0 chr20 69842753 69842829 -2311053 + (TG)n Simple_repeat Simple_repeat 2 78 0 1053 98 0 0 chr20 69842859 69842992 -2310890 + AluSq/x SINE Alu 7 139 -174 1050 131 149 0 chr20 69842995 69843170 -2310712 - MER30 DNA MER1_type -29 201 1 1864 166 3 0 chr20 69844074 69844369 -2309513 - AluJb SINE Alu -16 296 1 717 306 109 14 chr20 69844510 69844876 -2309006 - MLT1I LTR MaLR 0 409 9 268 237 13 0 chr20 69845206 69845282 -2308600 - L2 LINE L2 -1296 2018 1942 348 179 154 24 chr20 69845287 69845410 -2308472 + L1MC5 LINE L1 7768 7906 -55 2412 91 0 7 chr20 69845413 69845721 -2308161 - AluSq SINE Alu -7 306 1 436 260 75 50 chr20 69845824 69846024 -2307858 + MLT1G1 LTR MaLR 3 207 -388 975 144 54 59 chr20 69846079 69846122 -2307760 - L1MB2 LINE L1 -9 6162 6120 2373 62 14 0 chr20 69846122 69846411 -2307471 - AluY SINE Alu -18 293 1 975 144 54 59 chr20 69846411 69846589 -2307293 - L1MB2 LINE L1 -51 6120 5942 481 290 152 13 chr20 69846589 69846901 -2306981 + MLT1G1 LTR MaLR 215 520 -10 410 310 181 17 chr20 69846935 69847033 -2306849 - L2 LINE L2 -1498 1816 1735 2318 118 0 6 chr20 69847033 69847348 -2306534 - AluSq SINE Alu 0 313 1 410 310 181 17 chr20 69847348 69847945 -2305937 - L2 LINE L2 -1579 1735 1007 462 79 0 0 chr20 69847953 69848016 -2305866 + (TG)n Simple_repeat Simple_repeat 1 63 0 352 305 55 6 chr20 69848038 69848202 -2305680 + L1ME LINE L1 5604 5775 -346 359 324 55 0 chr20 69848366 69848504 -2305378 + MLT1K LTR MaLR 432 580 -8 1907 173 43 11 chr20 69848504 69848856 -2305026 + MLT1A1 LTR MaLR 1 363 -2 307 232 116 50 chr20 69849252 69849929 -2303953 - L1MC5 LINE L1 -236 7725 6969 22 0 0 0 chr20 69849937 69849959 -2303923 + AT_rich Low_complexity Low_complexity 1 22 0 1564 101 36 0 chr20 69850040 69850259 -2303623 + L1PA10 LINE L1 5939 6165 -3 1916 148 0 7 chr20 69850296 69850579 -2303303 + AluJb SINE Alu 11 291 -21 2297 92 0 0 chr20 69850585 69850877 -2303005 + AluSq SINE Alu 1 292 -21 12728 165 19 19 chr20 69850902 69851198 -2302684 + L1MB7 LINE L1 2636 2931 -3215 1582 191 67 0 chr20 69851198 69851481 -2302401 + AluJo SINE Alu 1 302 -10 12728 165 19 19 chr20 69851481 69852848 -2301034 + L1MB7 LINE L1 2931 4297 -1849 2395 96 6 3 chr20 69852848 69853160 -2300722 + AluSq SINE Alu 1 313 0 12728 165 19 19 chr20 69853160 69853875 -2300007 + L1MB7 LINE L1 4297 5018 -1128 2275 102 0 7 chr20 69853875 69854170 -2299712 + AluSx SINE Alu 1 293 -19 12728 165 19 19 chr20 69854170 69854264 -2299618 + L1MB7 LINE L1 5017 5110 -1036 1078 186 46 133 chr20 69854265 69854680 -2299202 - L1M4 LINE L1 -1185 5459 5081 4100 222 75 30 chr20 69854697 69854727 -2299155 - L1M4 LINE L1 -5393 1149 1122 2088 139 3 0 chr20 69854727 69855022 -2298860 - AluSx SINE Alu -16 296 1 4100 222 75 30 chr20 69855022 69856009 -2297873 - L1M4 LINE L1 -5420 1122 86 569 99 25 0 chr20 69856009 69856090 -2297792 + AluSg/x SINE Alu 219 301 -11 427 217 11 0 chr20 69856092 69856184 -2297698 - L1M4 LINE L1 -6448 94 2 7604 189 93 110 chr20 69856186 69857517 -2296365 - Cheshire DNA MER1_type -7 2413 1061 2509 61 0 23 chr20 69857517 69857827 -2296055 + AluY SINE Alu 1 303 -8 7604 189 93 110 chr20 69857827 69857920 -2295962 - Cheshire DNA MER1_type -1359 1061 968 2232 110 0 0 chr20 69857920 69858210 -2295672 + AluSx SINE Alu 1 290 -22 308 23 45 0 chr20 69858213 69858257 -2295625 + (CAAAA)n Simple_repeat Simple_repeat 1 46 0 1218 151 0 0 chr20 69858261 69858446 -2295436 + AluSg/x SINE Alu 128 312 0 7604 189 93 110 chr20 69858446 69859282 -2294600 - Cheshire DNA MER1_type -1457 963 1 2210 132 0 0 chr20 69859302 69859605 -2294277 - AluSx SINE Alu -9 303 1 2658 203 145 11 chr20 69859860 69860501 -2293381 + L1MB7 LINE L1 5445 6171 -13 2214 107 23 10 chr20 69860674 69860983 -2292899 + AluSq SINE Alu 1 313 0 2409 92 0 0 chr20 69861122 69861427 -2292455 - AluSg SINE Alu -5 305 1 2491 84 0 0 chr20 69862490 69862798 -2291084 + AluSx SINE Alu 5 312 0 2292 102 3 0 chr20 69863611 69863905 -2289977 - AluSx SINE Alu -17 295 1 2061 134 24 0 chr20 69863915 69864205 -2289677 - AluSx SINE Alu -15 297 1 526 72 0 0 chr20 69864469 69864538 -2289344 + HSMAR1 DNA Mariner 4 72 -1215 9114 84 17 4 chr20 69865554 69866766 -2287116 + HSMAR1 DNA Mariner 57 1284 -3 24 77 0 0 chr20 69866768 69866820 -2287062 + AT_rich Low_complexity Low_complexity 1 52 0 359 71 83 30 chr20 69866820 69866988 -2286894 + (TA)n Simple_repeat Simple_repeat 2 178 0 1459 193 30 0 chr20 69867024 69867293 -2286589 - AluJb SINE Alu -31 281 5 678 144 0 124 chr20 69867630 69867783 -2286099 + AluJb SINE Alu 2 135 -177 1933 105 0 34 chr20 69867996 69868331 -2285551 - AluSx SINE Alu 0 325 1 9102 219 45 22 chr20 69868370 69869236 -2284646 + L1ME LINE L1 2597 3441 -2705 1516 109 0 0 chr20 69869236 69869447 -2284435 + AluSg/x SINE Alu 82 292 -18 9102 219 45 22 chr20 69869447 69871215 -2282667 + L1ME LINE L1 3441 5293 -853 4977 90 46 15 chr20 69871205 69871496 -2282386 + L1PB1 LINE L1 5389 5669 -482 * 2147 116 0 0 chr20 69871496 69871798 -2282084 + AluSx SINE Alu 1 302 -10 4977 90 46 15 chr20 69871798 69871902 -2281980 + L1PB1 LINE L1 5669 5768 -383 354 45 0 0 chr20 69871902 69871946 -2281936 + (CA)n Simple_repeat Simple_repeat 2 45 0 4977 90 46 15 chr20 69871946 69872286 -2281596 + L1PB1 LINE L1 5768 6148 -3 241 247 72 0 chr20 69872299 69872396 -2281486 + L1ME LINE L1 5293 5396 -782 267 103 0 0 chr20 69872422 69872461 -2281421 + (A)n Simple_repeat Simple_repeat 1 39 0 690 202 48 96 chr20 69872461 69872669 -2281213 + L1ME LINE L1 5383 5580 -586 648 147 7 112 chr20 69872674 69872817 -2281065 + AluJo SINE Alu 7 134 -178 354 203 8 138 chr20 69872821 69872944 -2280938 + L1ME LINE L1 5570 5661 -505 963 169 0 12 chr20 69873049 69873215 -2280667 + AluJo SINE Alu 133 296 -16 412 179 12 12 chr20 69873217 69873301 -2280581 + L1MC5 LINE L1 7314 7397 -564 6513 124 62 60 chr20 69873375 69873858 -2280024 - Tigger3b DNA MER2_type -1797 1231 750 1933 119 7 20 chr20 69873858 69874161 -2279721 - AluSx SINE Alu -11 301 3 6513 124 62 60 chr20 69874161 69874622 -2279260 - Tigger3b DNA MER2_type -2278 750 281 1899 104 11 32 chr20 69874622 69874928 -2278954 + AluSq SINE Alu 11 310 0 6513 124 62 60 chr20 69874928 69875210 -2278672 - Tigger3b DNA MER2_type -2747 281 1 321 247 14 0 chr20 69875273 69875346 -2278536 + L1MC4 LINE L1 6750 6823 -1219 235 173 0 39 chr20 69875346 69875398 -2278484 + Tigger3(Golem) DNA MER2_type 222 271 -2758 828 203 190 19 chr20 69875426 69875576 -2278306 + L1MC4 LINE L1 6871 6994 -1048 1928 144 0 0 chr20 69875576 69875899 -2277983 + AluSx SINE Alu 1 323 0 828 203 190 19 chr20 69875899 69876063 -2277819 + L1MC4 LINE L1 6994 7240 -802 386 191 9 61 chr20 69876076 69876191 -2277691 + L1ME LINE L1 41 149 -5921 1954 146 6 19 chr20 69876362 69876678 -2277204 - AluSx SINE Alu 0 312 1 702 280 33 61 chr20 69877198 69877655 -2276227 + L1ME LINE L1 498 941 -5129 239 199 72 143 chr20 69877668 69877753 -2276129 + L1MC5 LINE L1 7563 7653 -308 2038 141 0 0 chr20 69877753 69878051 -2275831 + AluSx SINE Alu 1 298 -14 239 199 72 143 chr20 69878051 69878272 -2275610 + L1MC5 LINE L1 7653 7847 -114 243 143 18 36 chr20 69878429 69878485 -2275397 + CT-rich Low_complexity Low_complexity 5 59 0 1524 158 124 0 chr20 69878570 69878835 -2275047 + AluJo SINE Alu 1 298 -4 336 279 49 69 chr20 69879243 69879447 -2274435 + MLT1K LTR MaLR 315 514 -74 2117 104 0 7 chr20 69879452 69879760 -2274122 - AluSg SINE Alu -4 306 1 406 252 95 17 chr20 69879828 69880064 -2273818 - LTR16A1 LTR ERVL 0 491 168 8554 142 98 37 chr20 69880298 69880602 -2273280 + L1MCa LINE L1 286 570 -5856 212 31 62 0 chr20 69880602 69880634 -2273248 + A-rich Low_complexity Low_complexity 2 35 0 8554 142 98 37 chr20 69880634 69880932 -2272950 + L1MCa LINE L1 570 848 -5578 186 71 0 0 chr20 69880932 69880960 -2272922 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 8554 142 98 37 chr20 69880960 69881283 -2272599 + L1MCa LINE L1 848 1150 -5276 2110 121 3 16 chr20 69881283 69881617 -2272265 + AluSq SINE Alu 1 313 0 8554 142 98 37 chr20 69881617 69881817 -2272065 + L1MCa LINE L1 1150 1336 -5090 180 97 0 0 chr20 69881817 69881848 -2272034 + (CAA)n Simple_repeat Simple_repeat 1 31 0 8554 142 98 37 chr20 69881848 69882395 -2271487 + L1MCa LINE L1 1336 2063 -4363 838 154 0 37 chr20 69883202 69883364 -2270518 - FRAM SINE Alu -10 166 11 2082 80 14 10 chr20 69883602 69883891 -2269991 - AluY SINE Alu -9 302 13 1937 136 0 17 chr20 69883922 69884223 -2269659 - AluSx SINE Alu -16 296 1 2228 113 7 0 chr20 69884223 69884532 -2269350 - AluSx SINE Alu 0 312 1 734 229 80 28 chr20 69885825 69886113 -2267769 - L1MC5 LINE L1 -49 7912 7610 6728 149 12 18 chr20 69886143 69887836 -2266046 + L1MA4 LINE L1 4136 5823 -477 1311 163 97 21 chr20 69887836 69888125 -2265757 + AluJo SINE Alu 1 311 -1 6728 149 12 18 chr20 69888125 69888321 -2265561 + L1MA4 LINE L1 5823 6019 -281 230 207 17 0 chr20 69888327 69888385 -2265497 + L1MB3 LINE L1 6087 6145 -38 483 280 68 21 chr20 69888517 69888753 -2265129 - L1MC5 LINE L1 -389 7572 7326 771 232 119 0 chr20 69889046 69889223 -2264659 - MER58C DNA MER1_type -15 200 3 311 294 64 0 chr20 69889235 69889344 -2264538 - L1MC5 LINE L1 -844 7117 7002 1572 165 3 18 chr20 69889351 69889636 -2264246 + AluJb SINE Alu 15 295 -17 2349 70 3 16 chr20 69889638 69889953 -2263929 + AluY SINE Alu 1 311 0 351 305 102 38 chr20 69890211 69890447 -2263435 + LTR16C LTR ERVL 149 399 -92 840 215 0 0 chr20 69890645 69890851 -2263031 + FRAM SINE Alu 1 176 0 1738 153 0 7 chr20 69890851 69891126 -2262756 + AluSx SINE Alu 1 273 -39 642 121 0 24 chr20 69891127 69891251 -2262631 + (GAA)n Simple_repeat Simple_repeat 2 122 0 1545 246 128 43 chr20 69891264 69891706 -2262176 - L1MEc LINE L1 -3930 3208 2805 2282 81 3 0 chr20 69891706 69892004 -2261878 - AluSc SINE Alu -10 299 1 1545 246 128 43 chr20 69892004 69892040 -2261842 - L1MEc LINE L1 -4333 2805 2773 2031 114 3 31 chr20 69892040 69892357 -2261525 + AluSq SINE Alu 1 308 -5 1545 246 128 43 chr20 69892357 69892779 -2261103 - L1MEc LINE L1 -4365 2773 2275 528 274 39 29 chr20 69892807 69893011 -2260871 - L1MEc LINE L1 -6647 212 7 807 340 33 27 chr20 69893023 69893126 -2260756 - L2 LINE L2 -530 2784 2683 2030 194 167 16 chr20 69893126 69893617 -2260265 - MLT1F1 LTR MaLR -2 565 1 807 340 33 27 chr20 69893617 69893881 -2260001 - L2 LINE L2 -631 2683 2415 345 164 0 45 chr20 69893888 69893998 -2259884 + CT-rich Low_complexity Low_complexity 1 105 0 198 328 49 0 chr20 69894090 69894151 -2259731 + L2 LINE L2 3010 3073 -240 278 215 215 0 chr20 69894218 69894297 -2259585 + L2 LINE L2 3176 3271 -1 2118 110 0 38 chr20 69894339 69894657 -2259225 - AluSx SINE Alu -6 306 1 2481 53 0 3 chr20 69894811 69895115 -2258767 - AluY SINE Alu -8 303 1 227 333 53 53 chr20 69895483 69895786 -2258096 + L2 LINE L2 2268 2570 -744 247 337 12 0 chr20 69895938 69896021 -2257861 - MIR SINE MIR -1 261 178 522 305 188 28 chr20 69896058 69896494 -2257388 + L2 LINE L2 2807 3312 -1 1539 158 44 37 chr20 69896592 69896889 -2256993 - AluJo SINE Alu -13 299 1 293 247 0 0 chr20 69896958 69897035 -2256847 + L1PA16 LINE L1 5952 6028 -138 329 100 86 0 chr20 69897053 69897123 -2256759 + L1PA16 LINE L1 6089 6164 -2 303 176 59 47 chr20 69897269 69897354 -2256528 + ORSL DNA AcHobo 15 100 -175 2234 91 10 0 chr20 69897361 69897721 -2256161 - AluSq SINE Alu 0 363 1 2226 85 0 0 chr20 69897736 69898029 -2255853 - AluSx SINE Alu -19 293 1 239 67 0 0 chr20 69898053 69898083 -2255799 + ORSL DNA AcHobo 185 214 -61 228 284 0 18 chr20 69898282 69898415 -2255467 + C-rich Low_complexity Low_complexity 1 130 0 22 0 0 0 chr20 69898553 69898575 -2255307 + GC_rich Low_complexity Low_complexity 1 22 0 43 35 0 0 chr20 69898666 69898723 -2255159 + GC_rich Low_complexity Low_complexity 1 57 0 24 53 0 0 chr20 69898815 69898853 -2255029 + GC_rich Low_complexity Low_complexity 1 38 0 197 350 20 30 chr20 69899183 69899283 -2254599 - MER5A DNA MER1_type -28 161 63 2232 99 0 3 chr20 69899283 69899597 -2254285 - AluSq SINE Alu 0 313 1 283 380 63 0 chr20 69900005 69900163 -2253719 - MIR SINE MIR -60 202 35 2140 112 7 0 chr20 69900271 69900575 -2253307 - AluSq SINE Alu -7 306 1 2098 93 48 0 chr20 69900575 69900865 -2253017 - AluSx SINE Alu -8 304 1 240 301 194 0 chr20 69900880 69900983 -2252899 - MIR3 SINE MIR -8 200 78 518 306 128 49 chr20 69901347 69902024 -2251858 - L2 LINE L2 -457 2857 2127 1035 185 62 0 chr20 69902167 69902378 -2251504 - MER58A DNA MER1_type 0 224 1 187 380 0 22 chr20 69902386 69902478 -2251404 + L2 LINE L2 3102 3191 -81 185 279 118 66 chr20 69902558 69902694 -2251188 - MIR3 SINE MIR -17 191 49 677 319 27 19 chr20 69902823 69903083 -2250799 - MIR SINE MIR 0 262 1 182 400 0 0 chr20 69903087 69903142 -2250740 + MIR SINE MIR 158 212 -50 1309 174 65 31 chr20 69903488 69903782 -2250100 - AluJb SINE Alu -8 304 1 922 301 93 5 chr20 69905253 69905672 -2248210 - LTR16B LTR ERVL -4 460 5 183 260 143 0 chr20 69906421 69906498 -2247384 - MIR SINE MIR -62 146 59 2262 90 3 13 chr20 69907254 69907564 -2246318 + AluSp SINE Alu 1 307 -6 1386 155 186 0 chr20 69909754 69910006 -2243876 + AluJb SINE Alu 2 300 -2 2304 88 7 0 chr20 69911421 69911729 -2242153 + AluSp SINE Alu 1 310 -3 429 209 79 51 chr20 69913473 69913650 -2240232 + MER20 DNA MER1_type 31 212 -7 2073 113 0 16 chr20 69914014 69914324 -2239558 + AluJb SINE Alu 1 305 -7 2187 66 0 19 chr20 69915417 69915688 -2238194 + AluSq SINE Alu 20 313 0 232 36 0 0 chr20 69915688 69915716 -2238166 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 890 125 31 0 chr20 69915718 69915846 -2238036 + AluJo SINE Alu 4 135 -177 22 0 0 0 chr20 69915846 69915868 -2238014 + AT_rich Low_complexity Low_complexity 1 22 0 2340 112 0 0 chr20 69916163 69916468 -2237414 - AluSx SINE Alu 0 312 8 2527 57 0 0 chr20 69916927 69917224 -2236658 + AluY SINE Alu 1 297 -14 2235 95 3 3 chr20 69917235 69917543 -2236339 + AluSp SINE Alu 1 308 0 2263 105 3 0 chr20 69917968 69918262 -2235620 - AluSx SINE Alu -11 301 7 205 245 19 0 chr20 69918938 69918991 -2234891 + L2 LINE L2 3003 3056 -257 258 276 69 26 chr20 69920183 69920299 -2233583 + L2 LINE L2 1912 2032 -1282 788 240 0 12 chr20 69920548 69920719 -2233163 + Tigger5 DNA MER2_type 2155 2323 0 180 280 191 6 chr20 69920737 69920894 -2232988 - L2 LINE L2 -180 3133 2948 508 281 205 20 chr20 69920946 69921434 -2232448 - L2 LINE L2 -492 2822 2245 274 319 120 0 chr20 69921761 69921977 -2231905 - L2 LINE L2 -1764 1550 1309 200 257 138 46 chr20 69922473 69922582 -2231300 + MIR SINE MIR 39 157 -105 274 263 18 47 chr20 69924240 69924411 -2229471 + C-rich Low_complexity Low_complexity 4 169 0 21 0 0 0 chr20 69924596 69924617 -2229265 + GC_rich Low_complexity Low_complexity 1 21 0 317 210 0 0 chr20 69926210 69926272 -2227610 + MER45 DNA AcHobo 1520 1581 0 2310 119 0 3 chr20 69926655 69926966 -2226916 - AluSg SINE Alu 0 310 1 221 299 122 19 chr20 69927994 69928101 -2225781 - MIR SINE MIR -97 165 48 21 0 0 0 chr20 69928105 69928126 -2225756 + AT_rich Low_complexity Low_complexity 1 21 0 3744 139 14 22 chr20 69928661 69929139 -2224743 - MER41B LTR ERV1 0 635 162 2294 107 0 10 chr20 69929139 69929448 -2224434 - AluSq SINE Alu -7 306 1 3744 139 14 22 chr20 69929448 69929609 -2224273 - MER41B LTR ERV1 -473 162 1 412 262 139 21 chr20 69929827 69930014 -2223868 - L2 LINE L2 -10 3303 3095 242 294 65 0 chr20 69930756 69930848 -2223034 + MIR SINE MIR 34 131 -77 192 315 68 0 chr20 69932705 69932778 -2221104 - MIR SINE MIR -77 185 108 270 270 252 0 chr20 69933444 69933559 -2220323 - L2 LINE L2 -10 3262 3119 670 303 36 31 chr20 69934074 69934463 -2219419 - L1MC4 LINE L1 -11 8031 7641 2206 121 0 3 chr20 69935551 69935848 -2218034 - AluSx SINE Alu -16 296 1 1742 166 32 11 chr20 69937033 69937317 -2216565 - AluJb SINE Alu -21 291 2 2319 105 3 0 chr20 69937319 69937623 -2216259 - AluSq SINE Alu -8 305 1 404 145 29 0 chr20 69938104 69938173 -2215709 - L1M3 LINE L1 -403 5768 5698 2360 116 0 7 chr20 69938852 69939194 -2214688 + AluSq SINE Alu 1 313 0 2159 82 61 0 chr20 69939194 69939474 -2214408 + AluSc SINE Alu 1 297 -12 199 326 146 0 chr20 69945279 69945368 -2208514 + MIR SINE MIR 29 130 -78 234 200 152 90 chr20 69947677 69947822 -2206060 + L1ME4a LINE L1 5920 6073 -48 217 290 113 75 chr20 69948302 69948522 -2205360 + MIR SINE MIR 35 262 0 27 0 0 0 chr20 69949633 69949660 -2204222 + GC_rich Low_complexity Low_complexity 1 27 0 21 36 0 0 chr20 69952067 69952095 -2201787 + AT_rich Low_complexity Low_complexity 1 28 0 255 219 300 44 chr20 69952597 69952757 -2201125 + L2 LINE L2 2773 2973 -341 389 237 61 30 chr20 69952875 69953006 -2200876 + L2 LINE L2 3169 3303 -10 290 257 50 0 chr20 69953150 69953251 -2200631 + MER106B DNA MER1_type 954 1059 0 629 274 75 0 chr20 69953275 69953461 -2200421 - MIR SINE MIR -15 247 48 21 0 0 0 chr20 69955789 69955810 -2198072 + AT_rich Low_complexity Low_complexity 1 21 0 183 229 83 0 chr20 69956342 69956390 -2197492 - L2 LINE L2 -574 2740 2689 188 176 118 20 chr20 69957625 69957676 -2196206 + L2 LINE L2 3258 3313 0 377 402 14 9 chr20 69957806 69958025 -2195857 - L2 LINE L2 -932 2382 2163 2150 92 0 77 chr20 69958570 69958895 -2194987 + AluSx SINE Alu 1 300 -12 384 295 185 0 chr20 69960636 69960890 -2192992 + L2 LINE L2 3012 3312 -1 271 256 39 0 chr20 69960938 69961016 -2192866 + L2 LINE L2 3170 3250 -63 2960 241 46 14 chr20 70061829 70062678 -2091204 + L1M4 LINE L1 3728 4603 -1543 1391 180 65 20 chr20 70062674 70062980 -2090902 + L1MC2 LINE L1 6000 6319 -25 * 264 86 0 143 chr20 70063133 70063203 -2090679 - L1MB3 LINE L1 -1 6182 6123 2977 62 23 0 chr20 70063447 70063836 -2090046 + L1PA7 LINE L1 5440 5837 -317 1160 197 13 8 chr20 70064012 70064246 -2089636 + AluJo SINE Alu 67 301 -11 1690 225 83 10 chr20 70064288 70064878 -2089004 - L1M4 LINE L1 -2631 3515 2883 899 319 85 43 chr20 70064887 70065486 -2088396 - L2 LINE L2 -563 2751 2128 257 330 92 43 chr20 70065584 70065769 -2088113 - L2 LINE L2 -1408 1906 1713 195 100 0 0 chr20 70065773 70065803 -2088079 + (TTTA)n Simple_repeat Simple_repeat 1 30 0 372 325 313 2 chr20 70066008 70066423 -2087459 - L2 LINE L2 -1965 1349 806 258 274 142 9 chr20 70066491 70066604 -2087278 - L2 LINE L2 -3140 174 47 21 0 0 0 chr20 70067313 70067334 -2086548 + AT_rich Low_complexity Low_complexity 1 21 0 40 59 0 0 chr20 70069017 70069085 -2084797 + AT_rich Low_complexity Low_complexity 1 68 0 26 0 0 0 chr20 70069175 70069201 -2084681 + AT_rich Low_complexity Low_complexity 1 26 0 21 36 0 0 chr20 70069564 70069592 -2084290 + AT_rich Low_complexity Low_complexity 1 28 0 231 88 0 0 chr20 70070323 70070357 -2083525 + (A)n Simple_repeat Simple_repeat 1 34 0 220 278 0 0 chr20 70070611 70070683 -2083199 + A-rich Low_complexity Low_complexity 1 72 0 271 258 123 54 chr20 70073450 70073783 -2080099 + L1ME LINE L1 4211 4566 -1580 445 259 140 26 chr20 70074272 70074587 -2079295 + L1ME LINE L1 5258 5602 -582 1706 155 59 3 chr20 70074777 70075081 -2078801 + MER2 DNA MER2_type 24 344 -1 2480 181 41 24 chr20 70075290 70075831 -2078051 + MER44D DNA MER2_type 1 605 0 228 128 26 0 chr20 70076220 70076259 -2077623 - Tigger7 DNA MER2_type -52 2435 2396 * 3045 164 17 8 chr20 70076253 70076773 -2077109 - Tigger7 DNA MER2_type -208 525 1 197 351 0 18 chr20 70077553 70077610 -2076272 - L3 LINE CR1 -6 1571 1516 2424 81 0 0 chr20 70079244 70079553 -2074329 + AluSc SINE Alu 1 309 0 809 273 19 10 chr20 70079698 70079907 -2073975 + MIR SINE MIR 31 241 -21 24 0 0 0 chr20 70081277 70081301 -2072581 + AT_rich Low_complexity Low_complexity 1 24 0 269 284 68 27 chr20 70082220 70082294 -2071588 + L2 LINE L2 3098 3174 -98 245 140 0 0 chr20 70082965 70083015 -2070867 + LTR66 LTR ERVL 394 443 -167 238 109 0 0 chr20 70082977 70083023 -2070859 - LTR66 LTR ERVL -171 439 394 * 218 278 42 0 chr20 70083023 70083095 -2070787 + (CATATA)n Simple_repeat Simple_repeat 2 76 0 185 111 44 0 chr20 70083689 70083734 -2070148 + A-rich Low_complexity Low_complexity 4 50 0 418 310 92 7 chr20 70084251 70084393 -2069489 + MIR3 SINE MIR 45 198 -10 21 0 0 0 chr20 70084911 70084932 -2068950 + AT_rich Low_complexity Low_complexity 1 21 0 27 29 0 0 chr20 70084962 70084996 -2068886 + AT_rich Low_complexity Low_complexity 1 34 0 3489 130 77 14 chr20 70085317 70085962 -2067920 + L1MA4 LINE L1 5334 6020 -280 381 145 36 0 chr20 70085968 70086051 -2067831 + L1MB4 LINE L1 6095 6180 0 2151 110 0 0 chr20 70086219 70086529 -2067353 + AluSx SINE Alu 1 310 0 1954 149 78 126 chr20 70086529 70087154 -2066728 + L1MA9 LINE L1 5680 6274 -38 22 0 0 0 chr20 70088033 70088055 -2065827 + AT_rich Low_complexity Low_complexity 1 22 0 5404 44 6 0 chr20 70090159 70090814 -2063068 - L1PA5 LINE L1 -5 6149 5491 833 283 60 3 chr20 70090873 70091241 -2062641 + L1ME1 LINE L1 3179 3567 -2579 1991 56 0 4 chr20 70091342 70091594 -2062288 + L1PA7 LINE L1 5901 6151 -3 417 39 0 0 chr20 70091594 70091645 -2062237 + (TAGG)n Simple_repeat Simple_repeat 1 51 0 21 0 0 0 chr20 70091856 70091877 -2062005 + AT_rich Low_complexity Low_complexity 1 21 0 211 264 58 46 chr20 70092568 70092655 -2061227 - L2 LINE L2 0 3272 3185 187 264 57 0 chr20 70092799 70092852 -2061030 - L2 LINE L2 -1 3271 3216 22 56 0 0 chr20 70094235 70094271 -2059611 + AT_rich Low_complexity Low_complexity 1 36 0 364 301 14 34 chr20 70095281 70095427 -2058455 + MER20B DNA MER1_type 35 177 -606 350 310 60 60 chr20 70096702 70096902 -2056980 - L2 LINE L2 -830 2484 2285 442 229 104 92 chr20 70096978 70097227 -2056655 - MIR SINE MIR -10 252 1 23 0 0 0 chr20 70097234 70097257 -2056625 + AT_rich Low_complexity Low_complexity 1 23 0 323 288 13 12 chr20 70098534 70098635 -2055247 - MER5A DNA MER1_type -60 119 17 1917 88 6 117 chr20 70098836 70099178 -2054704 + AluSx SINE Alu 1 304 -8 4475 52 14 2 chr20 70099178 70099738 -2054144 + L1PA7 LINE L1 5568 6134 -20 276 343 10 30 chr20 70102968 70103067 -2050815 + MIR SINE MIR 52 147 -61 305 333 176 14 chr20 70104367 70104878 -2049004 - L2 LINE L2 -1479 1835 1242 1282 181 81 4 chr20 70105719 70105978 -2047904 - MSTB LTR MaLR 0 426 148 352 233 11 22 chr20 70106032 70106122 -2047760 + L1ME1 LINE L1 4066 4154 -1992 1936 249 47 23 chr20 70106132 70106747 -2047135 + L1ME1 LINE L1 5478 6107 -59 965 231 4 51 chr20 70106745 70107000 -2046882 + L1M4 LINE L1 3982 4224 -1922 * 2499 246 97 8 chr20 70107042 70108012 -2045870 + L1M4 LINE L1 4409 5471 -695 2312 76 0 10 chr20 70108999 70109313 -2044569 + AluY SINE Alu 1 311 0 234 185 34 118 chr20 70109707 70109826 -2044056 - L1MC5 LINE L1 -72 7889 7781 265 310 83 7 chr20 70110042 70110187 -2043695 + L2 LINE L2 1936 2091 -1223 251 318 114 49 chr20 70110285 70110549 -2043333 + L2 LINE L2 2396 2676 -638 263 217 83 0 chr20 70110590 70110650 -2043232 + L2 LINE L2 3246 3310 -3 480 308 159 17 chr20 70110797 70111167 -2042715 - L2 LINE L2 -111 3202 2784 212 259 86 0 chr20 70111306 70111364 -2042518 + L2 LINE L2 3247 3309 -4 1629 57 14 0 chr20 70111409 70111620 -2042262 - AluY SINE Alu -4 307 94 591 88 0 0 chr20 70111754 70111834 -2042048 - MADE1 DNA Mariner 0 80 1 290 217 0 0 chr20 70112810 70112879 -2041003 - L1MB4 LINE L1 0 6180 6112 * 380 268 73 15 chr20 70112850 70113142 -2040740 - L1ME LINE L1 -690 5474 5173 1393 245 35 42 chr20 70113165 70113569 -2040313 - L1MB5 LINE L1 -47 6127 5727 429 257 14 21 chr20 70113724 70113864 -2040018 + MIR3 SINE MIR 8 146 -62 1195 181 62 0 chr20 70113883 70114093 -2039789 + MER46A DNA MER2_type 14 236 0 839 155 69 23 chr20 70114219 70114393 -2039489 - L1MB5 LINE L1 -9 6165 5984 277 279 0 0 chr20 70114411 70114497 -2039385 - L1MB5 LINE L1 -275 5903 5818 * 1187 201 34 26 chr20 70114492 70114760 -2039122 + L1MB5 LINE L1 5535 5804 -370 953 250 10 0 chr20 70116930 70117130 -2036752 + MER58A DNA MER1_type 23 224 0 384 188 40 30 chr20 70118238 70118339 -2035543 + MER103 DNA DNA 19 120 -46 354 254 18 18 chr20 70118477 70118587 -2035295 + MIR SINE MIR 67 176 -86 226 194 75 75 chr20 70118977 70119044 -2034838 - L2 LINE L2 0 3272 3206 205 312 11 43 chr20 70119560 70119653 -2034229 - L3 LINE CR1 -645 932 843 726 288 17 13 chr20 70119829 70120065 -2033817 + MIR SINE MIR 16 252 -10 1396 162 24 24 chr20 70120465 70120718 -2033164 - AluJo SINE Alu -21 291 39 240 292 44 106 chr20 70121329 70121555 -2032327 + L2 LINE L2 3102 3313 0 579 174 0 0 chr20 70123670 70123785 -2030097 + (TG)n Simple_repeat Simple_repeat 1 115 0 410 316 26 7 chr20 70123874 70124026 -2029856 + L2 LINE L2 3150 3304 -9 234 0 0 0 chr20 70124031 70124057 -2029825 + (TGAG)n Simple_repeat Simple_repeat 2 27 0 266 325 0 0 chr20 70124401 70124481 -2029401 - MIR SINE MIR -181 81 2 194 208 104 0 chr20 70125334 70125382 -2028500 - L2 LINE L2 -14 3258 3206 2153 127 12 82 chr20 70125537 70125940 -2027942 - THE1C LTR MaLR 0 375 1 227 311 16 0 chr20 70125964 70126025 -2027857 - MER94 DNA DNA -1 133 72 433 276 94 52 chr20 70126082 70126274 -2027608 + MIR SINE MIR 28 227 -35 22 0 0 0 chr20 70126334 70126356 -2027526 + AT_rich Low_complexity Low_complexity 1 22 0 1419 185 62 27 chr20 70126502 70126794 -2027088 - AluJo SINE Alu 0 302 1 252 321 16 80 chr20 70126802 70126989 -2026893 - MIR SINE MIR -61 201 27 2234 123 0 0 chr20 70127949 70128259 -2025623 - AluSg SINE Alu 0 310 1 247 385 32 6 chr20 70128402 70128558 -2025324 - L1MC/D LINE L1 -1952 5856 5697 202 313 25 25 chr20 70129895 70129975 -2023907 - MER5B DNA MER1_type -46 132 53 310 320 29 40 chr20 70130312 70130487 -2023395 - MIR SINE MIR -51 211 39 22 0 0 0 chr20 70130865 70130887 -2022995 + AT_rich Low_complexity Low_complexity 1 22 0 425 308 70 73 chr20 70132339 70132654 -2021228 + L2 LINE L2 2942 3255 -17 371 182 15 0 chr20 70132751 70132817 -2021065 + L2 LINE L2 3205 3271 -1 1383 171 23 26 chr20 70135803 70136067 -2017815 - MER58B DNA MER1_type -3 338 76 324 209 187 0 chr20 70136227 70136318 -2017564 - L2 LINE L2 -20 3252 3145 527 233 68 31 chr20 70136474 70136637 -2017245 + MER5B DNA MER1_type 4 172 -6 532 293 31 26 chr20 70139263 70139454 -2014428 + MER58C DNA MER1_type 22 213 -2 405 357 81 5 chr20 70139789 70139974 -2013908 - MIR SINE MIR 0 262 64 352 241 147 0 chr20 70139980 70140096 -2013786 + MER94 DNA DNA 1 133 -1 383 309 81 59 chr20 70140526 70140762 -2013120 + L2 LINE L2 3025 3265 -7 282 188 72 0 chr20 70142125 70142194 -2011688 + MIR SINE MIR 111 184 -78 207 213 0 21 chr20 70142305 70142352 -2011530 + GA-rich Low_complexity Low_complexity 3 48 0 1295 25 19 0 chr20 70142873 70143030 -2010852 - L1PA5 LINE L1 0 6154 5995 1666 90 43 0 chr20 70143030 70143285 -2010597 + L1P LINE L1 5108 5373 -773 202 291 47 0 chr20 70143601 70143687 -2010195 - L2 LINE L2 -249 3023 2934 374 233 8 58 chr20 70143688 70143808 -2010074 - MER58B DNA MER1_type 0 341 228 1481 166 16 82 chr20 70143868 70144187 -2009695 + AluJb SINE Alu 1 298 -14 230 335 50 6 chr20 70144510 70144692 -2009190 - MER113 DNA MER1_type? -329 192 3 540 292 21 38 chr20 70144908 70145160 -2008722 + MIR SINE MIR 1 251 -11 392 298 50 0 chr20 70145556 70145697 -2008185 + Charlie8 DNA MER1_type 96 243 -2174 2390 109 36 31 chr20 70146550 70146909 -2006973 + THE1B LTR MaLR 2 362 -2 286 156 119 92 chr20 70147091 70147200 -2006682 - MIR3 SINE MIR -45 163 44 563 188 27 0 chr20 70147773 70147885 -2005997 + MER58 DNA MER1_type 2306 2420 0 205 175 0 25 chr20 70148256 70148296 -2005586 + GA-rich Low_complexity Low_complexity 4 42 0 229 221 73 29 chr20 70148564 70148632 -2005250 + MER3 DNA MER1_type 33 103 -106 * 533 241 172 0 chr20 70148581 70148755 -2005127 - MER3 DNA MER1_type -5 204 1 391 222 37 0 chr20 70148852 70148933 -2004949 + MER58B DNA MER1_type 258 341 0 2290 125 23 47 chr20 70149204 70149588 -2004294 + THE1C LTR MaLR 1 375 0 248 299 81 0 chr20 70149588 70149675 -2004207 + L2 LINE L2 3213 3306 -7 * 580 254 112 46 chr20 70149670 70150063 -2003819 - L2 LINE L2 -908 2406 1988 187 221 103 44 chr20 70150713 70150781 -2003101 - MIR SINE MIR -121 141 70 270 390 35 7 chr20 70152027 70152168 -2001714 + MIR SINE MIR 85 229 -33 296 272 118 15 chr20 70152953 70153089 -2000793 - MIR SINE MIR -86 176 27 373 158 24 0 chr20 70153638 70153720 -2000162 + (TCCA)n Simple_repeat Simple_repeat 4 87 0 504 140 0 0 chr20 70153994 70154087 -1999795 + (CATTC)n Simple_repeat Simple_repeat 3 95 0 180 111 0 0 chr20 70154156 70154183 -1999699 + (TCCC)n Simple_repeat Simple_repeat 3 29 0 250 286 143 0 chr20 70154613 70154718 -1999164 - MIR SINE MIR -117 145 26 274 305 30 15 chr20 70155231 70155362 -1998520 + L2 LINE L2 2922 3054 -218 679 205 138 58 chr20 70155427 70155771 -1998111 + MLT1C LTR MaLR 6 425 -42 208 284 30 15 chr20 70155859 70155926 -1997956 + L2 LINE L2 3187 3254 -18 210 118 0 0 chr20 70155937 70155971 -1997911 + (TGAA)n Simple_repeat Simple_repeat 1 34 0 686 160 8 17 chr20 70156711 70156830 -1997052 - MLT1A1 LTR MaLR -41 324 207 252 171 0 0 chr20 70157182 70157223 -1996659 + MIR SINE MIR 112 152 -110 313 254 164 0 chr20 70157326 70157448 -1996434 + MIR SINE MIR 47 188 -74 322 285 8 15 chr20 70157635 70157765 -1996117 + L2 LINE L2 2986 3114 -199 230 285 0 49 chr20 70157773 70157896 -1995986 + CT-rich Low_complexity Low_complexity 1 117 0 341 315 23 15 chr20 70158253 70158383 -1995499 - MIR3 SINE MIR -63 145 15 192 282 165 12 chr20 70158510 70158595 -1995287 - L2 LINE L2 -5 3267 3170 280 341 48 0 chr20 70158728 70158854 -1995028 - L2 LINE L2 -292 2980 2849 304 171 66 26 chr20 70159000 70159076 -1994806 - MLT1A2 LTR MaLR -58 316 238 283 273 15 0 chr20 70159769 70159835 -1994047 + MER45 DNA AcHobo 1515 1581 0 811 228 94 10 chr20 70162039 70162241 -1991641 - MER20 DNA MER1_type 0 219 1 609 235 29 49 chr20 70162378 70162612 -1991270 - MIR SINE MIR -15 247 18 189 236 36 0 chr20 70162610 70162665 -1991217 + MIR SINE MIR 178 234 -28 * 993 261 110 35 chr20 70163130 70163559 -1990323 - MLT1C LTR MaLR 0 467 7 377 310 203 13 chr20 70164012 70164622 -1989260 + L2 LINE L2 2201 2926 -388 191 339 164 5 chr20 70164717 70164906 -1988976 + L2 LINE L2 3093 3311 -2 1935 179 37 3 chr20 70166504 70166856 -1987026 - MLT1A1 LTR MaLR -1 364 1 383 214 12 0 chr20 70166969 70167053 -1986829 + MIR SINE MIR 68 152 -110 271 183 65 32 chr20 70167831 70167924 -1985958 - Charlie7 DNA MER1_type -67 2545 2450 1954 118 85 90 chr20 70168348 70168438 -1985444 - THE1B LTR MaLR 0 364 275 2230 125 0 0 chr20 70168438 70168750 -1985132 - AluSx SINE Alu 0 312 1 1954 118 85 90 chr20 70168750 70169025 -1984857 - THE1B LTR MaLR -89 275 1 252 293 18 102 chr20 70169655 70169822 -1984060 - MIR SINE MIR -18 244 92 272 240 100 0 chr20 70169885 70169985 -1983897 - L2 LINE L2 -25 3247 3138 1245 217 131 0 chr20 70170171 70170485 -1983397 + MLT2C1 LTR ERVL 2 356 -41 318 326 11 0 chr20 70170494 70170583 -1983299 + L1MC4 LINE L1 6614 6703 -1339 255 170 0 0 chr20 70170597 70170644 -1983238 + MLT2C1 LTR ERVL 508 554 0 359 270 111 32 chr20 70170904 70171093 -1982789 + MIR SINE MIR 59 262 0 992 258 96 12 chr20 70171299 70171633 -1982249 - MLT1B LTR MaLR -6 384 23 363 281 11 1 chr20 70173255 70173365 -1980517 - MLT1H LTR MaLR -370 179 26 1654 145 37 3 chr20 70174165 70174462 -1979420 - L1PB1 LINE L1 0 6151 5845 210 294 172 37 chr20 70174622 70175023 -1978859 + L2 LINE L2 1978 2432 -882 486 316 59 16 chr20 70175192 70175496 -1978386 + L1MEc LINE L1 37 353 -6043 493 194 21 42 chr20 70175755 70175899 -1977983 + L1MEc LINE L1 883 1023 -5182 236 241 0 0 chr20 70176156 70176214 -1977668 - L1ME LINE L1 -423 5698 5641 1107 79 0 12 chr20 70176313 70176477 -1977405 - L1PA13 LINE L1 0 6163 6002 366 343 42 54 chr20 70176600 70177099 -1976783 + L1ME4a LINE L1 5616 6108 -13 1181 209 122 45 chr20 70177268 70177603 -1976279 + MLT1A1 LTR MaLR 3 363 -2 1452 79 14 0 chr20 70177788 70178003 -1975879 - L1PA5 LINE L1 0 6154 5937 1228 178 58 51 chr20 70178414 70178706 -1975176 - L1ME LINE L1 -407 5995 5702 629 181 64 18 chr20 70178803 70178974 -1974908 - L1ME LINE L1 -713 5701 5523 10855 211 64 34 chr20 70178975 70179079 -1974803 - L1 LINE L1 -1337 6228 6129 1822 192 0 13 chr20 70179079 70179387 -1974495 - AluJo SINE Alu -8 304 1 10855 211 64 34 chr20 70179387 70180038 -1973844 - L1 LINE L1 -1436 6129 5499 2200 128 0 7 chr20 70180038 70180342 -1973540 + AluSx SINE Alu 1 302 -10 10855 211 64 34 chr20 70180342 70183864 -1970018 - L1 LINE L1 -2066 5499 2055 3874 255 62 38 chr20 70183895 70184205 -1969677 - L1MEc LINE L1 -2218 4426 4125 1232 171 47 107 chr20 70184205 70184590 -1969292 - MLT1A1 LTR MaLR 0 365 4 3874 255 62 38 chr20 70184590 70186874 -1967008 - L1MEc LINE L1 -2519 4125 1633 2414 256 65 22 chr20 70186870 70187643 -1966239 - L1MEc LINE L1 -5554 1271 466 * 195 328 17 0 chr20 70187747 70187805 -1966077 + L2 LINE L2 2996 3054 -218 187 316 63 0 chr20 70188209 70188288 -1965594 + MIR SINE MIR 16 99 -163 * 1059 279 37 17 chr20 70188286 70188688 -1965194 - L2 LINE L2 -945 2369 1960 1280 255 83 34 chr20 70189152 70189599 -1964283 - L1MEc LINE L1 -6073 469 1 22 0 0 0 chr20 70189711 70189733 -1964149 + AT_rich Low_complexity Low_complexity 1 22 0 531 286 78 41 chr20 70189765 70190059 -1963823 - L1ME4a LINE L1 -208 5913 5609 364 283 18 9 chr20 70191888 70192001 -1961881 + MER94 DNA DNA 2 115 -19 585 244 128 17 chr20 70192511 70192691 -1961191 - MER20 DNA MER1_type -3 216 17 493 257 0 61 chr20 70192705 70192853 -1961029 - Charlie8 DNA MER1_type -2148 269 131 5036 174 81 11 chr20 70192881 70194032 -1959850 - Tigger3b DNA MER2_type 0 1231 1 408 206 19 56 chr20 70194894 70195001 -1958881 - MER5A DNA MER1_type -80 109 7 500 226 61 47 chr20 70195015 70195227 -1958655 - MER20 DNA MER1_type 0 219 5 358 304 91 36 chr20 70195491 70195744 -1958138 - L1ME4a LINE L1 -2255 5553 5287 783 275 28 5 chr20 70195883 70196101 -1957781 - MER58A DNA MER1_type -1 223 1 511 290 19 26 chr20 70197190 70197345 -1956537 - MIR SINE MIR -30 232 79 2175 94 0 0 chr20 70197575 70197840 -1956042 + AluSq SINE Alu 1 265 -48 224 336 50 21 chr20 70197950 70198090 -1955792 + MIR SINE MIR 23 166 -96 305 278 183 0 chr20 70199058 70199184 -1954698 - MIR SINE MIR -112 150 2 204 125 25 0 chr20 70200031 70200071 -1953811 + L2 LINE L2 2994 3034 -238 2413 99 0 0 chr20 70201617 70201921 -1951961 - AluSc SINE Alu -5 304 1 2556 126 84 0 chr20 70202098 70202565 -1951317 - MER1A DNA MER1_type 0 529 1 215 300 191 9 chr20 70202639 70202749 -1951133 - MIR SINE MIR -117 145 16 244 224 0 0 chr20 70202863 70202912 -1950970 + L2 LINE L2 3221 3269 -3 195 229 0 0 chr20 70202920 70202981 -1950901 + (TGGA)n Simple_repeat Simple_repeat 3 63 0 269 326 11 0 chr20 70203051 70203143 -1950739 + (TGGA)n Simple_repeat Simple_repeat 4 96 0 630 304 64 18 chr20 70203803 70204083 -1949799 - MER102b DNA MER1_type -48 293 1 493 309 29 19 chr20 70204364 70204571 -1949311 + MIR SINE MIR 34 242 -20 194 189 0 0 chr20 70204588 70204625 -1949257 + L2 LINE L2 3195 3231 -82 671 233 23 6 chr20 70204628 70204804 -1949078 - L1MB8 LINE L1 -2 6176 5998 427 273 6 24 chr20 70204980 70205145 -1948737 + (CAT)n Simple_repeat Simple_repeat 3 164 0 484 147 0 0 chr20 70205322 70205397 -1948485 + AluJo SINE Alu 2 76 -236 1405 141 0 41 chr20 70205520 70205762 -1948120 + AluJo SINE Alu 78 309 -3 507 257 21 21 chr20 70207299 70207443 -1946439 - MIR SINE MIR -87 175 32 372 347 73 11 chr20 70207483 70207757 -1946125 - MLT1J LTR MaLR -106 405 115 211 267 0 0 chr20 70208179 70208254 -1945628 + (CATCC)n Simple_repeat Simple_repeat 2 76 0 342 303 0 0 chr20 70208274 70208449 -1945433 + (CATCC)n Simple_repeat Simple_repeat 2 176 0 250 306 37 9 chr20 70208507 70208615 -1945267 - L2 LINE L2 -11 3261 3151 695 251 29 61 chr20 70210174 70210474 -1943408 - MLT2C1 LTR ERVL -167 297 1 266 138 69 0 chr20 70211284 70211342 -1942540 - L2 LINE L2 -49 3264 3203 405 180 0 0 chr20 70211555 70211644 -1942238 + (TTCA)n Simple_repeat Simple_repeat 2 90 0 329 371 113 24 chr20 70211644 70211981 -1941901 - L2 LINE L2 0 3272 2906 1739 190 39 3 chr20 70211981 70212318 -1941564 + MLT1A1 LTR MaLR 1 349 -16 232 127 36 18 chr20 70213163 70213218 -1940664 + CT-rich Low_complexity Low_complexity 1 56 0 938 300 86 35 chr20 70214119 70214726 -1939156 + MER20B DNA MER1_type 39 676 -107 231 36 0 0 chr20 70215143 70215171 -1938711 + (TGGA)n Simple_repeat Simple_repeat 3 30 0 188 293 67 0 chr20 70218991 70219066 -1934816 + L2 LINE L2 2973 3052 -220 244 256 132 50 chr20 70219617 70219738 -1934144 - MIR SINE MIR -14 248 118 226 65 0 0 chr20 70219890 70219921 -1933961 + MER30B DNA MER1_type 44 74 -116 * 2359 124 20 0 chr20 70219917 70220273 -1933609 - MER83C LTR ERV1 -9 364 2 194 214 0 0 chr20 70220753 70220795 -1933087 + L2 LINE L2 3019 3060 -212 309 333 156 35 chr20 70220866 70221030 -1932852 + L2 LINE L2 2991 3134 -179 1243 111 92 32 chr20 70221030 70221247 -1932635 + MER30B DNA MER1_type 1 230 0 309 333 156 35 chr20 70221247 70221370 -1932512 + L2 LINE L2 3134 3313 0 21 0 0 0 chr20 70222940 70222961 -1930921 + AT_rich Low_complexity Low_complexity 1 21 0 274 313 21 0 chr20 70224705 70224801 -1929081 - MIR SINE MIR -14 248 151 1121 164 53 5 chr20 70227896 70228104 -1925778 + MER20 DNA MER1_type 2 219 0 5574 139 53 20 chr20 70229059 70231167 -1922715 + L1MA4A LINE L1 4115 6296 -7 260 380 0 0 chr20 70231945 70232016 -1921866 - L2 LINE L2 -55 3258 3188 204 340 225 19 chr20 70234340 70234549 -1919333 + MIR SINE MIR 8 259 -3 303 281 49 0 chr20 70234802 70234884 -1918998 + MIR SINE MIR 58 143 -65 200 35 35 0 chr20 70234931 70234960 -1918922 + (TA)n Simple_repeat Simple_repeat 2 31 0 21 36 0 0 chr20 70235040 70235068 -1918814 + AT_rich Low_complexity Low_complexity 1 28 0 2063 142 10 0 chr20 70236037 70236339 -1917543 + AluJb SINE Alu 1 305 -7 487 196 10 10 chr20 70238058 70238155 -1915727 + MER58 DNA MER1_type 3 99 -2321 269 269 11 11 chr20 70238168 70238261 -1915621 + MER58 DNA MER1_type 2319 2411 -9 370 121 17 0 chr20 70238867 70238925 -1914957 - U7 snRNA snRNA -2 61 3 2905 3 0 12 chr20 70239120 70239442 -1914440 + AluYb8 SINE Alu 1 318 0 252 325 114 0 chr20 70239459 70239573 -1914309 - L2 LINE L2 -1 3271 3145 254 339 28 18 chr20 70239779 70239888 -1913994 - L2 LINE L2 -433 2881 2772 2455 137 62 32 chr20 70239894 70240395 -1913487 - L1MB5 LINE L1 -1 6173 5654 2389 150 53 17 chr20 70240395 70240808 -1913074 + MSTA LTR MaLR 1 428 0 2455 137 62 32 chr20 70240808 70240839 -1913043 - L1MB5 LINE L1 -520 5654 5625 440 129 65 0 chr20 70240839 70240932 -1912950 + MSTA-int LTR MaLR 32 130 -1521 * 6954 26 7 0 chr20 70240929 70241788 -1912094 - L1PA4 LINE L1 -1486 4660 3796 7483 28 9 0 chr20 70241788 70243275 -1910607 + L1PA4 LINE L1 4662 6155 0 4189 182 29 6 chr20 70243275 70244099 -1909783 + MSTA-int LTR MaLR 122 964 -687 2151 127 8 14 chr20 70244096 70244457 -1909425 + MSTA-int LTR MaLR 1293 1651 0 * 2064 184 53 19 chr20 70244457 70244869 -1909013 + MSTA LTR MaLR 1 426 -2 4475 214 43 9 chr20 70244871 70246434 -1907448 - L1M3 LINE L1 -520 5660 4045 258 300 0 0 chr20 70297266 70297336 -1856546 - MER63 DNA MER1_type -13 1049 980 473 167 0 69 chr20 70297337 70297439 -1856443 - MER63 DNA MER1_type -84 752 32 703 258 5 27 chr20 70297454 70297640 -1856242 + MIR SINE MIR 45 226 -36 588 216 3 13 chr20 70299059 70299368 -1854514 + (CA)n Simple_repeat Simple_repeat 1 305 0 584 226 0 6 chr20 70299400 70299577 -1854305 + (CA)n Simple_repeat Simple_repeat 1 176 0 357 218 62 148 chr20 70299926 70300169 -1853713 + MLT1D LTR MaLR 18 242 -263 1048 227 22 0 chr20 70300362 70300587 -1853295 + MLT1D LTR MaLR 255 484 -21 673 205 38 54 chr20 70300799 70300984 -1852898 + MER20 DNA MER1_type 34 215 -4 405 0 0 0 chr20 70301847 70301892 -1851990 + (CA)n Simple_repeat Simple_repeat 2 46 0 393 279 162 7 chr20 70304907 70305061 -1848821 - MER5A DNA MER1_type 0 189 12 292 309 80 57 chr20 70307308 70307483 -1846399 - MIR SINE MIR -77 185 7 318 247 0 26 chr20 70308703 70308780 -1845102 + MER58B DNA MER1_type 20 94 -247 1210 209 28 52 chr20 70308780 70309106 -1844776 - L1MC2 LINE L1 -17 6327 6010 1033 212 30 4 chr20 70309108 70309339 -1844543 + MER58B DNA MER1_type 104 340 -1 377 299 0 9 chr20 70309600 70309707 -1844175 + MER77 LTR ERV1 54 159 -446 1076 278 36 7 chr20 70309752 70310061 -1843821 + MER77 LTR ERV1 282 599 -6 332 320 31 62 chr20 70310309 70310332 -1843550 - MIR SINE MIR -40 168 146 1472 220 7 20 chr20 70310332 70310636 -1843246 - AluJo SINE Alu -2 300 1 332 320 31 62 chr20 70310636 70310740 -1843142 - MIR SINE MIR -62 146 45 1309 102 15 19 chr20 70311422 70311628 -1842254 - AluSx SINE Alu -107 205 1 398 323 48 98 chr20 70311754 70312255 -1841627 - HAL1b LINE L1 -846 502 27 410 255 190 11 chr20 70312493 70312677 -1841205 - L2 LINE L2 0 3313 3097 1628 187 68 6 chr20 70313290 70313705 -1840177 + MLT1D LTR MaLR 9 499 -6 389 254 55 9 chr20 70316157 70316267 -1837615 + MIR SINE MIR 40 154 -108 1482 167 65 142 chr20 70316772 70317328 -1836554 - MER67D LTR ERV1 -1 513 1 22 0 0 0 chr20 70317960 70317982 -1835900 + AT_rich Low_complexity Low_complexity 1 22 0 227 143 0 0 chr20 70319656 70319691 -1834191 + L2 LINE L2 2608 2642 -672 1146 209 51 18 chr20 70319740 70320013 -1833869 - AluJb SINE Alu -30 282 1 313 316 115 17 chr20 70320290 70320524 -1833358 - MIR SINE MIR 0 262 6 571 268 39 13 chr20 70321478 70321631 -1832251 - MIR SINE MIR -11 251 95 372 270 50 0 chr20 70321631 70321731 -1832151 + MER21B LTR ERV1 1 105 -758 256 18 55 36 chr20 70321860 70321915 -1831967 + (TA)n Simple_repeat Simple_repeat 1 56 0 305 193 34 25 chr20 70321936 70322055 -1831827 + (TA)n Simple_repeat Simple_repeat 1 120 0 3498 179 65 26 chr20 70322088 70322790 -1831092 + MER21B LTR ERV1 134 863 0 257 333 11 11 chr20 70322793 70322880 -1831002 - MIR SINE MIR -162 100 14 380 313 40 20 chr20 70323347 70323548 -1830334 - L1ME4a LINE L1 -239 5882 5678 383 239 122 54 chr20 70323648 70323761 -1830121 + L1MCc LINE L1 37 141 -6281 2295 97 3 0 chr20 70323761 70324060 -1829822 + AluSx SINE Alu 1 300 -12 383 239 122 54 chr20 70324060 70324168 -1829714 + L1MCc LINE L1 141 595 -5827 2337 107 3 0 chr20 70324189 70324497 -1829385 - AluSx SINE Alu -3 309 1 909 266 59 0 chr20 70324553 70324824 -1829058 + L1MD3 LINE L1 7709 7995 0 286 247 165 0 chr20 70325302 70325387 -1828495 + MIR SINE MIR 109 207 -55 2291 90 7 7 chr20 70326063 70326363 -1827519 + AluSx SINE Alu 1 300 -12 237 300 0 0 chr20 70327305 70327385 -1826497 + (TA)n Simple_repeat Simple_repeat 2 81 0 230 146 42 0 chr20 70327398 70327446 -1826436 + (CATA)n Simple_repeat Simple_repeat 2 51 0 304 324 84 0 chr20 70328140 70328282 -1825600 + L2 LINE L2 1098 1251 -2063 483 242 0 0 chr20 70328359 70328458 -1825424 + MER5A DNA MER1_type 91 189 0 1744 235 81 144 chr20 70328460 70330059 -1823823 + L2 LINE L2 1283 2781 -533 21631 27 0 1 chr20 70330614 70333829 -1820053 + L1PA2 LINE L1 2959 6173 0 183 80 0 0 chr20 70334097 70334122 -1819760 + (A)n Simple_repeat Simple_repeat 1 25 0 484 271 193 0 chr20 70334711 70334877 -1819005 + MIR SINE MIR 36 233 -29 567 285 47 45 chr20 70336286 70336647 -1817235 - L1ME4a LINE L1 -263 5858 5501 205 214 18 0 chr20 70336661 70336717 -1817165 + (TA)n Simple_repeat Simple_repeat 2 58 0 22 0 0 0 chr20 70336851 70336873 -1817009 + AT_rich Low_complexity Low_complexity 1 22 0 193 117 52 26 chr20 70337463 70337508 -1816374 + (TTATA)n Simple_repeat Simple_repeat 2 51 -29 1866 92 59 15 chr20 70337508 70337781 -1816101 - AluSg SINE Alu -25 285 1 193 117 52 26 chr20 70337781 70337812 -1816070 + (TTATA)n Simple_repeat Simple_repeat 51 80 0 25 31 0 0 chr20 70337821 70337853 -1816029 + AT_rich Low_complexity Low_complexity 1 32 0 40 73 0 0 chr20 70337909 70337991 -1815891 + AT_rich Low_complexity Low_complexity 1 82 0 433 277 40 34 chr20 70338457 70338634 -1815248 + MER5B DNA MER1_type 1 178 0 2195 102 13 16 chr20 70338769 70339082 -1814800 + AluSx SINE Alu 1 312 0 740 260 57 37 chr20 70339261 70339507 -1814375 + L1MC4a LINE L1 5556 5806 -2002 5157 140 41 27 chr20 70339597 70340997 -1812885 - L1PA15 LINE L1 -40 6125 4706 26 64 0 0 chr20 70341002 70341049 -1812833 + AT_rich Low_complexity Low_complexity 1 47 0 410 269 119 0 chr20 70341050 70341184 -1812698 + L1MC4a LINE L1 5823 5972 -1836 265 212 51 15 chr20 70341396 70341533 -1812349 + (TA)n Simple_repeat Simple_repeat 2 143 0 1845 301 87 30 chr20 70341536 70342700 -1811182 + L1MC4a LINE L1 6219 7448 -360 312 211 0 0 chr20 70342760 70342812 -1811070 + MER81 DNA DNA 5 56 -58 983 180 67 48 chr20 70343084 70343400 -1810482 + MER5C DNA MER1_type 1 322 -2 235 241 51 25 chr20 70343543 70343622 -1810260 - L2 LINE L2 -3 3269 3189 669 268 42 0 chr20 70343965 70344155 -1809727 + MER20 DNA MER1_type 18 215 -4 180 111 0 0 chr20 70344700 70344727 -1809155 + (T)n Simple_repeat Simple_repeat 1 27 0 180 393 22 0 chr20 70345552 70345641 -1808241 + MIR SINE MIR 1 91 -171 192 317 48 67 chr20 70346140 70346244 -1807638 - MIR SINE MIR -90 172 71 250 187 40 0 chr20 70346367 70346424 -1807458 + MIR SINE MIR 95 146 -62 2455 72 0 3 chr20 70348361 70348666 -1805216 + AluY SINE Alu 1 304 -7 336 283 22 103 chr20 70349019 70349203 -1804679 - MIR SINE MIR -9 253 85 643 115 0 0 chr20 70349207 70349303 -1804579 + MSTB LTR MaLR 1 96 -330 617 101 0 0 chr20 70349290 70349379 -1804503 + MSTB LTR MaLR 8 96 -330 * 2063 161 50 12 chr20 70349366 70349768 -1804114 + MSTB LTR MaLR 8 363 -2 191 291 18 0 chr20 70350127 70350182 -1803700 + L3 LINE CR1 405 460 -1117 222 286 0 0 chr20 70351335 70351405 -1802477 - MIR SINE MIR -78 130 61 738 150 108 0 chr20 70351616 70351736 -1802146 - FRAM SINE Alu -23 153 21 234 324 35 42 chr20 70351782 70351924 -1801958 - MIR SINE MIR -31 231 91 * 323 291 39 31 chr20 70351910 70352037 -1801845 - L2 LINE L2 0 3272 3145 217 306 174 25 chr20 70352314 70352589 -1801293 - L2 LINE L2 -824 2490 2175 373 232 141 0 chr20 70353698 70353797 -1800085 + MER5B DNA MER1_type 2 114 -64 647 185 67 7 chr20 70353802 70353937 -1799945 - L1MB8 LINE L1 -2 6176 6034 253 135 0 0 chr20 70353937 70353974 -1799908 + MER5B DNA MER1_type 135 171 -7 615 131 23 39 chr20 70354351 70354481 -1799401 + Ricksha DNA DNA 3032 3159 -95 701 225 59 6 chr20 70354733 70354902 -1798980 + Ricksha DNA DNA 2 179 -1867 * 10970 164 21 40 chr20 70354790 70355693 -1798189 - Ricksha_c DNA DNA -1221 2033 1115 2180 127 0 3 chr20 70355693 70355993 -1797889 - AluSq SINE Alu -14 299 1 10970 164 21 40 chr20 70355993 70357152 -1796730 - Ricksha_c DNA DNA -2139 1115 9 578 226 21 54 chr20 70358476 70358662 -1795220 - MIR SINE MIR -30 232 53 303 284 11 0 chr20 70359196 70359284 -1794598 - MER103 DNA DNA -9 157 69 461 179 0 0 chr20 70361662 70361746 -1792136 + L1MA5 LINE L1 6217 6300 0 30 0 0 0 chr20 70361746 70361776 -1792106 + AT_rich Low_complexity Low_complexity 1 30 0 668 228 63 16 chr20 70362115 70362304 -1791578 + MER20 DNA MER1_type 22 219 0 420 299 43 16 chr20 70362740 70362927 -1790955 + MIR SINE MIR 49 240 -22 642 279 34 91 chr20 70364110 70364461 -1789421 - L2 LINE L2 -43 3270 2940 444 309 69 45 chr20 70366829 70367120 -1786762 - L2 LINE L2 -88 3225 2928 1507 225 109 64 chr20 70367547 70368080 -1785802 + MLT1F1 LTR MaLR 11 567 0 239 282 14 0 chr20 70368180 70368251 -1785631 + (TA)n Simple_repeat Simple_repeat 2 73 0 345 319 35 60 chr20 70368562 70368794 -1785088 - MIR SINE MIR -35 227 2 4410 120 9 8 chr20 70369792 70370442 -1783440 + MER4D LTR ERV1 1 651 -252 1973 178 85 33 chr20 70370442 70370902 -1782980 - LTR2B LTR ERV1 0 490 7 1492 118 19 74 chr20 70370903 70371174 -1782708 + MER4D LTR ERV1 648 903 0 4071 125 18 59 chr20 70371287 70371949 -1781933 + MER41B LTR ERV1 1 635 0 2179 130 148 13 chr20 70373978 70374355 -1779527 - MSTA LTR MaLR 0 428 1 2231 178 10 3 chr20 70374582 70374965 -1778917 - MLT1B LTR MaLR -1 389 4 736 314 61 20 chr20 70376771 70377261 -1776621 - L1MC4a LINE L1 -1926 5882 5373 205 299 103 21 chr20 70377430 70377527 -1776355 - L2 LINE L2 0 3313 3209 21 0 0 0 chr20 70378736 70378757 -1775125 + AT_rich Low_complexity Low_complexity 1 21 0 888 238 26 3 chr20 70378839 70379329 -1774553 - L1MB1 LINE L1 0 6168 5656 201 270 160 20 chr20 70380013 70380113 -1773769 - MIR SINE MIR -77 131 18 273 277 153 15 chr20 70380383 70380520 -1773362 + L2 LINE L2 2707 2862 -452 189 250 21 0 chr20 70380617 70380665 -1773217 + L2 LINE L2 3261 3309 -4 1462 219 30 22 chr20 70381104 70381465 -1772417 - MLT2D LTR ERVL -50 364 1 557 138 0 0 chr20 70384952 70385032 -1768850 + MADE1 DNA Mariner 1 80 0 336 229 9 0 chr20 70385991 70386067 -1767815 + MER58 DNA MER1_type 161 241 -100 216 308 13 13 chr20 70386841 70386919 -1766963 + MER5B DNA MER1_type 2 79 -99 689 293 83 34 chr20 70388085 70388494 -1765388 - LTR16A LTR ERVL -6 444 16 2135 104 42 0 chr20 70389237 70389526 -1764356 - AluSq SINE Alu -12 301 1 241 176 44 0 chr20 70391433 70391501 -1762381 + GA-rich Low_complexity Low_complexity 3 73 0 2361 43 0 4 chr20 70391535 70391811 -1762071 + L1PA5 LINE L1 5879 6153 -1 219 69 0 0 chr20 70391811 70391840 -1762042 + (TA)n Simple_repeat Simple_repeat 1 29 0 629 164 123 23 chr20 70392859 70393030 -1760852 + MER20B DNA MER1_type 558 745 -38 186 254 146 54 chr20 70393291 70393496 -1760386 + L2 LINE L2 2667 2890 -424 261 320 22 67 chr20 70393638 70393816 -1760066 + L2 LINE L2 3108 3277 -36 188 318 11 23 chr20 70393822 70393910 -1759972 + MIR SINE MIR 138 224 -38 699 240 11 27 chr20 70393937 70394120 -1759762 - MIR SINE MIR -71 191 12 197 376 148 0 chr20 70395088 70395189 -1758693 - MIR SINE MIR -118 144 29 232 206 16 16 chr20 70395773 70395836 -1758046 - L2 LINE L2 0 3272 3210 238 254 118 0 chr20 70396025 70396135 -1757747 + L1ME4a LINE L1 5978 6100 -21 24 53 0 0 chr20 70397060 70397098 -1756784 + AT_rich Low_complexity Low_complexity 1 38 0 295 308 121 30 chr20 70397251 70397449 -1756433 - MIR SINE MIR -6 256 41 322 328 44 6 chr20 70397491 70397671 -1756211 - L1ME4a LINE L1 -265 5856 5670 328 306 112 33 chr20 70397753 70398083 -1755799 + L1ME4a LINE L1 4070 4425 -1721 23026 151 27 12 chr20 70398083 70403512 -1750370 + L1MA3 LINE L1 10 5355 -2369 2311 86 0 3 chr20 70403512 70403802 -1750080 - AluY SINE Alu -22 289 1 23026 151 27 12 chr20 70403802 70405685 -1748197 + L1MA3 LINE L1 5355 7450 -274 217 0 0 57 chr20 70405685 70405720 -1748162 + (GGGTG)n Simple_repeat Simple_repeat 3 35 0 23026 151 27 12 chr20 70405720 70406000 -1747882 + L1MA3 LINE L1 7450 7724 0 24 91 0 0 chr20 70406644 70406710 -1747172 + AT_rich Low_complexity Low_complexity 1 66 0 292 324 76 55 chr20 70406844 70407119 -1746763 + L1ME4a LINE L1 5350 5630 -491 259 279 90 9 chr20 70407138 70407249 -1746633 - MIR SINE MIR -14 248 129 403 231 131 0 chr20 70407569 70407699 -1746183 + L1ME4a LINE L1 5964 6110 -11 318 50 0 0 chr20 70407729 70407769 -1746113 + (CA)n Simple_repeat Simple_repeat 2 41 0 422 320 19 0 chr20 70408060 70408216 -1745666 - Charlie8 DNA MER1_type -2141 276 118 273 29 0 0 chr20 70408591 70408625 -1745257 + (CA)n Simple_repeat Simple_repeat 1 34 0 4388 268 42 22 chr20 70410321 70411747 -1742135 - L1M4 LINE L1 -1387 4759 3301 2188 118 20 0 chr20 70411747 70412053 -1741829 - AluSx SINE Alu 0 312 1 4388 268 42 22 chr20 70412053 70412097 -1741785 - L1M4 LINE L1 -2845 3301 3259 1402 98 21 47 chr20 70412136 70412294 -1741588 + MER50 LTR ERV1 1 153 -581 2095 125 3 0 chr20 70412294 70412589 -1741293 - AluSx SINE Alu -16 296 1 1402 98 21 47 chr20 70412589 70412665 -1741217 + MER50 LTR ERV1 153 229 -505 * 1538 152 0 76 chr20 70412659 70412745 -1741137 + MER50 LTR ERV1 433 524 -210 2279 113 0 0 chr20 70412745 70413056 -1740826 - AluSq SINE Alu -2 311 1 1538 152 0 76 chr20 70413056 70413271 -1740611 + MER50 LTR ERV1 524 711 -23 1739 154 98 0 chr20 70413274 70413592 -1740290 - MLT1A1 LTR MaLR -16 349 1 1554 268 8 4 chr20 70413592 70414088 -1739794 - L1M4 LINE L1 -2925 3221 2724 696 263 145 34 chr20 70414105 70414553 -1739329 + LTR33A LTR ERVL 7 504 -19 1248 242 151 34 chr20 70414827 70415245 -1738637 - MLT1D LTR MaLR -17 488 22 354 23 0 0 chr20 70415726 70415769 -1738113 + (CA)n Simple_repeat Simple_repeat 2 44 0 207 0 0 0 chr20 70416240 70416263 -1737619 + (T)n Simple_repeat Simple_repeat 1 23 0 695 320 30 9 chr20 70417208 70417439 -1736443 - MIR SINE MIR -4 258 23 3802 62 15 0 chr20 70417451 70417905 -1735977 - L1PA6 LINE L1 -1 6153 5693 1952 53 0 34 chr20 70417905 70418169 -1735713 + L1P LINE L1 4590 4844 -1302 339 89 0 0 chr20 70419121 70419166 -1734716 + AluJb SINE Alu 84 128 -174 182 278 28 14 chr20 70419173 70419245 -1734637 + MIR SINE MIR 173 245 -17 714 260 30 34 chr20 70419976 70420211 -1733671 - MLT1E2 LTR MaLR -6 620 387 257 280 79 105 chr20 70420671 70421014 -1732868 - L2 LINE L2 -18 3254 2921 184 246 204 28 chr20 70421121 70421263 -1732619 + L2 LINE L2 3105 3271 -1 230 173 96 0 chr20 70422222 70422274 -1731608 - L1MC4a LINE L1 -1090 6718 6662 23 33 0 0 chr20 70422524 70422554 -1731328 + AT_rich Low_complexity Low_complexity 1 30 0 1757 158 67 33 chr20 70422835 70423195 -1730687 + THE1C LTR MaLR 4 375 0 198 319 74 51 chr20 70423263 70423479 -1730403 - L2 LINE L2 -1019 2295 2075 693 287 68 35 chr20 70423539 70423936 -1729946 - LTR33 LTR ERVL -111 410 1 6527 40 12 8 chr20 70424333 70425132 -1728750 - L1PA7 LINE L1 0 6154 5352 493 59 29 0 chr20 70425134 70425202 -1728680 + L1PA7 LINE L1 6083 6152 -2 463 335 120 33 chr20 70425204 70425949 -1727933 - L2 LINE L2 -15 3298 2481 337 170 150 10 chr20 70425962 70426062 -1727820 - MER33 DNA MER1_type -1 362 249 895 214 59 5 chr20 70426097 70426317 -1727565 - L1MB3 LINE L1 -4 6415 6184 * 7303 194 34 113 chr20 70426298 70427927 -1725955 - L1MB3 LINE L1 -986 5396 4045 1786 195 42 0 chr20 70427927 70428261 -1725621 + MER7A DNA MER2_type 1 346 0 7303 194 34 113 chr20 70428261 70429219 -1724663 - L1MB3 LINE L1 -2337 4045 3013 1223 185 8 25 chr20 70429224 70429462 -1724420 - L1MB3 LINE L1 -6129 255 22 974 198 14 40 chr20 70429471 70429693 -1724189 - MER33 DNA MER1_type -108 216 1 541 331 60 6 chr20 70429693 70430010 -1723872 - L2 LINE L2 -871 2443 2110 690 218 37 60 chr20 70430010 70430226 -1723656 - MER20B DNA MER1_type 0 219 9 242 163 41 0 chr20 70430402 70430451 -1723431 - Charlie5 DNA MER1_type -106 2506 2456 27 0 0 0 chr20 70432673 70432700 -1721182 + AT_rich Low_complexity Low_complexity 1 27 0 246 229 76 29 chr20 70432798 70432903 -1720979 + L1MC4 LINE L1 6612 6721 -1321 514 243 85 0 chr20 70432992 70433169 -1720713 + L1ME1 LINE L1 1846 2037 -4359 302 189 49 8 chr20 70433190 70433312 -1720570 + (TA)n Simple_repeat Simple_repeat 1 127 0 188 200 50 0 chr20 70433364 70433444 -1720438 + (TA)n Simple_repeat Simple_repeat 2 85 0 354 247 123 14 chr20 70433540 70433686 -1720196 + L1ME1 LINE L1 2032 2193 -4203 2175 234 78 77 chr20 70433687 70433923 -1719959 + L1ME1 LINE L1 4966 5200 -1035 7868 20 1 0 chr20 70433923 70435506 -1718376 - L1PA2 LINE L1 -3 6152 4568 2175 234 78 77 chr20 70435506 70436531 -1717351 + L1ME1 LINE L1 5200 6230 -5 311 384 81 5 chr20 70437032 70437230 -1716652 - L2 LINE L2 -224 3048 2836 272 266 28 83 chr20 70437246 70437355 -1716527 + MER5B DNA MER1_type 3 105 -73 22 0 0 0 chr20 70438136 70438158 -1715724 + AT_rich Low_complexity Low_complexity 1 22 0 1489 284 100 13 chr20 70439972 70440412 -1713470 + L1ME3 LINE L1 4823 5224 -938 239 0 0 31 chr20 70440412 70440444 -1713438 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 1489 284 100 13 chr20 70440444 70441063 -1712819 + L1ME3 LINE L1 5224 5977 -185 906 92 0 0 chr20 70442249 70442379 -1711503 + (TG)n Simple_repeat Simple_repeat 2 131 0 185 203 49 8 chr20 70443026 70443149 -1710733 + (TA)n Simple_repeat Simple_repeat 1 128 0 236 283 71 49 chr20 70443178 70443362 -1710520 + L1MC/D LINE L1 5689 5876 -1932 381 305 133 5 chr20 70443935 70444145 -1709737 - MIR SINE MIR -21 241 5 255 330 17 17 chr20 70444442 70444557 -1709325 - L2 LINE L2 -12 3260 3146 307 299 8 16 chr20 70444721 70444848 -1709034 + L1MEd LINE L1 77 202 -5917 429 244 23 68 chr20 70444912 70445088 -1708794 - MER5A DNA MER1_type -21 168 1 1001 277 89 69 chr20 70445119 70445632 -1708250 + L1MEd LINE L1 297 835 -5284 2414 72 0 20 chr20 70445632 70445938 -1707944 + AluY SINE Alu 1 300 -11 1001 277 89 69 chr20 70445938 70446254 -1707628 + L1MEd LINE L1 835 1143 -4976 304 289 21 19 chr20 70446844 70446981 -1706901 - MIR SINE MIR -68 140 33 249 267 21 80 chr20 70447958 70448145 -1705737 + C-rich Low_complexity Low_complexity 1 176 0 224 190 40 69 chr20 70448126 70448300 -1705582 + (CACCAT)n Simple_repeat Simple_repeat 4 172 0 * 202 121 22 159 chr20 70448236 70448418 -1705464 + (CATCC)n Simple_repeat Simple_repeat 5 161 0 * 298 191 27 66 chr20 70448699 70448882 -1705000 + (CACCAT)n Simple_repeat Simple_repeat 3 178 0 349 148 39 71 chr20 70449174 70449356 -1704526 + (CACCAT)n Simple_repeat Simple_repeat 3 178 0 1044 223 24 8 chr20 70449686 70449933 -1703949 - MER58 DNA MER1_type -57 284 34 297 114 0 0 chr20 70450032 70450076 -1703806 + L2 LINE L2 3229 3272 0 29 60 0 0 chr20 70451276 70451326 -1702556 + AT_rich Low_complexity Low_complexity 1 50 0 308 269 17 0 chr20 70452158 70452277 -1701605 + CT-rich Low_complexity Low_complexity 4 124 0 631 211 40 0 chr20 70453903 70454055 -1699827 + MER53 DNA DNA 22 179 -10 416 256 51 91 chr20 70454098 70454179 -1699703 + Charlie8 DNA MER1_type 46 129 -212 2039 135 0 26 chr20 70454179 70454490 -1699392 + AluSx SINE Alu 1 303 -9 416 256 51 91 chr20 70454490 70454584 -1699298 + Charlie8 DNA MER1_type 129 214 -127 2418 76 7 3 chr20 70455147 70455450 -1698432 + AluSx SINE Alu 1 304 -8 280 205 135 39 chr20 70455493 70455649 -1698233 + HAL1b LINE L1 1178 1348 0 510 245 109 0 chr20 70455699 70455846 -1698036 + L1ME4a LINE L1 5944 6106 -15 216 0 0 0 chr20 70457655 70457679 -1696203 + (A)n Simple_repeat Simple_repeat 1 24 0 215 156 44 0 chr20 70459262 70459307 -1694575 + (CATG)n Simple_repeat Simple_repeat 4 50 0 189 262 204 10 chr20 70460222 70460325 -1693557 - MIR SINE MIR -37 225 103 1860 156 69 37 chr20 70460543 70461085 -1692797 + MLT2A2 LTR ERVL 1 552 -2 2196 156 41 33 chr20 70461314 70461856 -1692026 + MLT2A2 LTR ERVL 3 554 0 663 144 27 0 chr20 70463273 70463384 -1690498 + L1PB1 LINE L1 6034 6147 -4 312 300 79 82 chr20 70463776 70464193 -1689689 - L2 LINE L2 -68 3245 2830 200 35 35 0 chr20 70465559 70465588 -1688294 + (AGGGGG)n Simple_repeat Simple_repeat 3 32 0 234 300 45 9 chr20 70466129 70466239 -1687643 + MIR SINE MIR 72 185 -77 183 189 0 0 chr20 70466416 70466453 -1687429 - MIR SINE MIR -110 152 116 298 260 207 13 chr20 70467326 70467476 -1686406 - MER5A DNA MER1_type -7 182 4 386 259 18 27 chr20 70468336 70468448 -1685434 + LTR16C LTR ERVL 372 482 -9 983 195 54 64 chr20 70469567 70469865 -1684017 + L1MA8 LINE L1 5983 6277 -14 346 325 64 25 chr20 70469871 70470074 -1683808 + MIR SINE MIR 3 213 -49 1611 172 0 27 chr20 70472019 70472315 -1681567 + AluJo SINE Alu 8 295 -17 562 220 53 0 chr20 70474912 70475044 -1678838 - MIR SINE MIR -115 147 9 26 30 0 0 chr20 70476523 70476556 -1677326 + GC_rich Low_complexity Low_complexity 1 33 0 291 292 53 35 chr20 70477005 70477118 -1676764 - L2 LINE L2 -13 3300 3186 586 270 54 22 chr20 70477152 70477337 -1676545 - MIR SINE MIR -35 227 37 182 333 30 15 chr20 70477804 70477870 -1676012 - MIR SINE MIR -64 144 78 377 309 83 48 chr20 70477962 70478192 -1675690 - MIR SINE MIR -14 248 11 22 35 0 0 chr20 70478406 70478435 -1675447 + AT_rich Low_complexity Low_complexity 1 29 0 618 262 25 25 chr20 70478530 70478767 -1675115 - L1MEc LINE L1 -4785 1611 1375 887 255 59 38 chr20 70478780 70479185 -1674697 - MLT1G1 LTR MaLR 0 595 125 274 241 0 0 chr20 70479433 70479491 -1674391 + MLT1F LTR MaLR 3 60 -535 657 268 139 17 chr20 70479543 70479942 -1673940 + MLT1F LTR MaLR 105 531 -11 22 0 0 0 chr20 70480647 70480669 -1673213 + AT_rich Low_complexity Low_complexity 1 22 0 205 161 0 0 chr20 70481131 70481162 -1672720 + (CA)n Simple_repeat Simple_repeat 1 31 0 222 281 118 0 chr20 70481816 70481915 -1671967 + MIR SINE MIR 49 157 -67 2493 111 56 0 chr20 70483751 70484093 -1669789 - THE1B LTR MaLR 0 364 4 225 82 61 0 chr20 70484999 70485048 -1668834 + (TA)n Simple_repeat Simple_repeat 2 53 0 669 286 67 28 chr20 70486255 70486612 -1667270 + L1ME4a LINE L1 5748 6118 -3 5538 212 55 55 chr20 70486615 70488247 -1665635 - L1MB5 LINE L1 -54 6120 4493 2256 167 64 20 chr20 70488247 70488655 -1665227 - MSTB LTR MaLR 0 426 1 5538 212 55 55 chr20 70488655 70489653 -1664229 - L1MB5 LINE L1 -1681 4493 3497 21 0 0 0 chr20 70490352 70490373 -1663509 + AT_rich Low_complexity Low_complexity 1 21 0 180 0 0 0 chr20 70490510 70490530 -1663352 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 446 333 5 5 chr20 70490677 70490863 -1663019 + MIR SINE MIR 70 255 -7 228 236 73 0 chr20 70491012 70491067 -1662815 - L2 LINE L2 0 3313 3255 565 244 171 16 chr20 70491114 70491307 -1662575 - MER58A DNA MER1_type 0 224 2 328 361 30 6 chr20 70491378 70491544 -1662338 - L2 LINE L2 -218 3054 2885 207 324 153 44 chr20 70491530 70492008 -1661874 - L2 LINE L2 -353 2961 2432 * 1942 120 3 27 chr20 70492306 70492622 -1661260 + AluSq SINE Alu 1 309 0 234 0 0 0 chr20 70492897 70492923 -1660959 + (A)n Simple_repeat Simple_repeat 1 26 0 243 328 0 0 chr20 70494441 70494499 -1659383 + L3b LINE CR1 1273 1330 -253 443 198 19 19 chr20 70495286 70495392 -1658490 - L1ME3A LINE L1 -66 6104 5999 321 252 105 42 chr20 70496530 70496673 -1657209 - MIR SINE MIR -19 243 92 1745 213 33 0 chr20 70496973 70497340 -1656542 - L1MB5 LINE L1 0 6174 5796 2417 74 0 0 chr20 70497351 70497648 -1656234 - AluY SINE Alu -14 297 1 275 352 57 21 chr20 70497757 70497950 -1655932 + MIR SINE MIR 38 237 -25 566 244 72 21 chr20 70499086 70499279 -1654603 - MER67D LTR ERV1 -6 508 306 1375 196 9 72 chr20 70499325 70499657 -1654225 - MER67D LTR ERV1 -203 311 1 509 293 98 52 chr20 70500492 70500553 -1653329 - MLT1F1 LTR MaLR -19 576 519 2059 110 0 27 chr20 70500553 70500845 -1653037 - AluSx SINE Alu -28 284 1 509 293 98 52 chr20 70500845 70501281 -1652601 - MLT1F1 LTR MaLR -76 519 13 275 257 31 149 chr20 70501299 70501622 -1652260 - MLT1F1-int LTR MaLR -6 1365 1081 593 270 58 66 chr20 70502279 70502553 -1651329 - MLT1F1-int LTR MaLR -771 600 329 266 259 72 38 chr20 70502717 70502899 -1650983 - MLT1G LTR MaLR 0 590 353 256 208 167 0 chr20 70503312 70503384 -1650498 - L2 LINE L2 -35 3278 3195 2922 3 0 0 chr20 70504061 70504372 -1649510 - AluYa5 SINE Alu 0 311 1 953 159 20 0 chr20 70504998 70505149 -1648733 - THE1C LTR MaLR 0 375 222 1665 81 0 9 chr20 70505149 70505360 -1648522 + AluY SINE Alu 1 209 -102 266 0 29 0 chr20 70505361 70505395 -1648487 + (CAAAAA)n Simple_repeat Simple_repeat 1 35 0 1170 101 71 84 chr20 70505397 70505635 -1648247 - THE1C LTR MaLR -140 235 1 230 327 30 59 chr20 70505908 70506009 -1647873 + L2 LINE L2 3181 3278 -35 4673 226 60 13 chr20 70506116 70508592 -1645290 + L1MD1 LINE L1 1471 3828 -2483 2341 86 7 3 chr20 70508592 70508893 -1644989 - AluSq SINE Alu -10 303 2 4673 226 60 13 chr20 70508893 70510945 -1642937 + L1MD1 LINE L1 3828 6311 0 1414 214 147 38 chr20 70510941 70511686 -1642196 + L1ME2 LINE L1 5121 5945 -219 * 668 192 44 55 chr20 70511683 70511865 -1642017 + L1ME2 LINE L1 2754 2933 -3213 * 1315 224 230 15 chr20 70511864 70512338 -1641544 + L1ME2 LINE L1 5433 6008 -158 536 278 118 7 chr20 70512369 70512657 -1641225 + L1M4 LINE L1 3136 3455 -2691 * 636 163 136 0 chr20 70512641 70512788 -1641094 + L1MA6 LINE L1 6134 6300 0 441 155 175 0 chr20 70512865 70512968 -1640914 + L1ME2 LINE L1 6044 6164 0 310 107 0 0 chr20 70513870 70513923 -1639959 - L1ME2 LINE L1 -6 6164 6110 700 217 30 18 chr20 70514185 70514351 -1639531 - MER5B DNA MER1_type -6 172 5 236 313 164 22 chr20 70514378 70514512 -1639370 + MIR3 SINE MIR 15 167 -41 1748 119 92 30 chr20 70514888 70515223 -1638659 - THE1C LTR MaLR -2 373 18 2472 159 44 16 chr20 70515448 70515881 -1638001 + MER65A LTR ERV1 1 445 0 220 274 158 27 chr20 70516016 70516162 -1637720 + L2 LINE L2 2900 3064 -208 368 329 32 45 chr20 70516289 70516444 -1637438 - MER91A DNA MER1_type -41 155 3 318 276 98 24 chr20 70516539 70516662 -1637220 + L2 LINE L2 3137 3268 -4 446 261 110 57 chr20 70517093 70517357 -1636525 - L1MC4a LINE L1 -1917 5891 5614 200 205 0 0 chr20 70518172 70518211 -1635671 + (TTCA)n Simple_repeat Simple_repeat 2 40 0 196 193 0 88 chr20 70518211 70518268 -1635614 - L2 LINE L2 0 3313 3262 833 254 19 74 chr20 70518603 70519066 -1634816 - L2 LINE L2 -222 3091 2644 1727 235 103 32 chr20 70520454 70520957 -1632925 + MLT1F1 LTR MaLR 18 556 -11 188 33 0 33 chr20 70521147 70521177 -1632705 + (TAAAAA)n Simple_repeat Simple_repeat 2 30 0 211 349 78 6 chr20 70521202 70521368 -1632514 - MIR SINE MIR -6 256 79 222 300 0 0 chr20 70521468 70521518 -1632364 + L2 LINE L2 3168 3217 -55 554 288 131 0 chr20 70522258 70522449 -1631433 - MIR SINE MIR -39 223 8 203 178 0 22 chr20 70522456 70522501 -1631381 + C-rich Low_complexity Low_complexity 3 46 0 268 189 0 0 chr20 70522679 70522732 -1631150 - L2 LINE L2 -10 3262 3210 23 0 0 0 chr20 70524010 70524033 -1629849 + AT_rich Low_complexity Low_complexity 1 23 0 785 150 83 0 chr20 70525393 70525513 -1628369 + FLAM_C SINE Alu 1 130 -3 2142 102 0 33 chr20 70525518 70525821 -1628061 + AluSc SINE Alu 1 293 -16 182 324 81 0 chr20 70525822 70525896 -1627986 + L2 LINE L2 3144 3223 -49 2127 94 52 0 chr20 70526248 70526535 -1627347 + AluSc SINE Alu 1 302 -7 650 180 60 104 chr20 70527035 70527218 -1626664 - MER20 DNA MER1_type -22 197 23 279 321 22 29 chr20 70527596 70527733 -1626149 + L2 LINE L2 3174 3309 -4 47 28 0 14 chr20 70527798 70527841 -1626041 + AT_rich Low_complexity Low_complexity 1 44 -27 1950 156 0 3 chr20 70527841 70528130 -1625752 + AluSx SINE Alu 1 288 -24 47 28 0 14 chr20 70528130 70528158 -1625724 + AT_rich Low_complexity Low_complexity 44 71 0 14502 208 34 16 chr20 70528398 70530297 -1623585 + L1PB3 LINE L1 2 1866 -4345 2012 139 7 0 chr20 70530297 70530599 -1623283 + AluSc SINE Alu 5 308 -1 14502 208 34 16 chr20 70530599 70532570 -1621312 + L1PB3 LINE L1 1866 3608 -2603 195 42 0 0 chr20 70532570 70532594 -1621288 + (TAA)n Simple_repeat Simple_repeat 1 24 0 14502 208 34 16 chr20 70532594 70534695 -1619187 + L1PB3 LINE L1 3608 5670 -541 3479 114 36 30 chr20 70535187 70535591 -1618291 + L1PB3 LINE L1 5673 6082 -129 2403 100 0 0 chr20 70535591 70535901 -1617981 + AluSg SINE Alu 1 310 0 3479 114 36 30 chr20 70535901 70536030 -1617852 + L1PB3 LINE L1 6082 6209 -2 362 284 10 0 chr20 70536506 70536608 -1617274 + (TG)n Simple_repeat Simple_repeat 2 104 0 224 215 46 0 chr20 70536930 70536995 -1616887 - L2 LINE L2 -226 3046 2979 517 309 45 31 chr20 70537086 70537374 -1616508 + L1ME3A LINE L1 4822 5113 -1033 1037 281 45 5 chr20 70537451 70537832 -1616050 + L1ME3A LINE L1 5359 5754 -416 700 236 81 58 chr20 70537876 70538022 -1615860 + L1ME3A LINE L1 5840 5981 -189 1542 226 21 37 chr20 70538022 70538402 -1615480 + MLT1A2 LTR MaLR 1 374 0 700 236 81 58 chr20 70538402 70538564 -1615318 + L1ME3A LINE L1 5981 6155 -15 549 246 54 12 chr20 70538613 70538780 -1615102 + MIR SINE MIR 70 243 -19 218 237 17 17 chr20 70538813 70538872 -1615010 + (CATATA)n Simple_repeat Simple_repeat 5 63 0 212 255 75 57 chr20 70541893 70541999 -1611883 - L2 LINE L2 -5 3267 3160 237 65 0 0 chr20 70542026 70542057 -1611825 + (CAT)n Simple_repeat Simple_repeat 3 33 0 2000 109 32 18 chr20 70542621 70542904 -1610978 - AluSg1 SINE Alu -22 287 1 180 0 0 0 chr20 70543112 70543132 -1610750 + (CACAG)n Simple_repeat Simple_repeat 1 20 0 879 238 38 22 chr20 70543173 70543427 -1610455 + L1MD2 LINE L1 5747 6017 -285 969 298 108 38 chr20 70543478 70544032 -1609850 - MLT1E LTR MaLR 0 593 1 261 217 0 0 chr20 70544696 70544742 -1609140 + AluJ/monomer SINE Alu 1 46 -253 2081 130 7 0 chr20 70544825 70545125 -1608757 - AluSq SINE Alu -1 312 11 478 200 33 0 chr20 70546350 70546440 -1607442 + MER81 DNA DNA 22 114 0 385 300 139 9 chr20 70546505 70546728 -1607154 - MIR SINE MIR -3 259 8 407 324 38 38 chr20 70546743 70547005 -1606877 - MIR SINE MIR 0 262 1 1754 228 145 57 chr20 70547491 70548199 -1605683 + Charlie1 DNA MER1_type 1 2096 -665 374 250 196 0 chr20 70548213 70548325 -1605557 - MER119 DNA MER1_type -449 134 1 1803 258 83 37 chr20 70548330 70549194 -1604688 + L1ME2 LINE L1 2580 3483 -2663 562 231 37 0 chr20 70549204 70549338 -1604544 + L1ME2 LINE L1 4689 4827 -1319 * 2584 234 88 28 chr20 70549319 70550151 -1603731 + L1ME2 LINE L1 5262 6143 -21 278 200 41 163 chr20 70550196 70550342 -1603540 + L1MC4 LINE L1 7821 7927 -115 2202 126 0 0 chr20 70550342 70550644 -1603238 + AluSx SINE Alu 1 302 -10 278 200 41 163 chr20 70550644 70550742 -1603140 + L1MC4 LINE L1 7927 8035 -7 543 263 32 55 chr20 70551033 70551250 -1602632 + MIR SINE MIR 19 230 -32 368 325 42 26 chr20 70551431 70551622 -1602260 + L2 LINE L2 675 868 -2446 1324 315 102 19 chr20 70551623 70552477 -1601405 + L2 LINE L2 1182 2106 -1208 302 265 33 135 chr20 70552579 70552794 -1601088 - L2 LINE L2 0 3313 3121 1292 134 0 10 chr20 70552917 70553111 -1600771 - L1PB1 LINE L1 -3 6148 5957 22 0 0 0 chr20 70553966 70553988 -1599894 + AT_rich Low_complexity Low_complexity 1 22 0 299 277 93 31 chr20 70554215 70554370 -1599512 - MIR SINE MIR -63 145 20 424 330 75 39 chr20 70554743 70554906 -1598976 + L2 LINE L2 2545 2701 -613 1781 217 57 39 chr20 70554906 70555400 -1598482 + MLT1D LTR MaLR 3 505 0 424 330 75 39 chr20 70555400 70555651 -1598231 + L2 LINE L2 2701 2974 -340 511 175 31 0 chr20 70555697 70555794 -1598088 + MER5A DNA MER1_type 25 124 -65 371 282 18 0 chr20 70555930 70556040 -1597842 + L2 LINE L2 3157 3268 -4 237 348 30 30 chr20 70556113 70556248 -1597634 + L2 LINE L2 3138 3272 0 24 32 0 0 chr20 70557965 70557996 -1595886 + AT_rich Low_complexity Low_complexity 1 31 0 491 264 323 19 chr20 70558510 70558878 -1595004 + L2 LINE L2 2814 3293 -20 940 109 5 27 chr20 70558879 70559063 -1594819 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 228 182 45 30 chr20 70559064 70559130 -1594752 + GA-rich Low_complexity Low_complexity 3 69 0 258 315 77 63 chr20 70559222 70559365 -1594517 - L2 LINE L2 -260 3053 2909 380 180 38 0 chr20 70560105 70560192 -1593690 + MER2 DNA MER2_type 1 89 -150 4264 185 36 24 chr20 70560354 70561033 -1592849 - L1MB7 LINE L1 -16 6168 5466 2470 90 0 0 chr20 70561033 70561345 -1592537 - AluSx SINE Alu 0 312 1 4264 185 36 24 chr20 70561345 70561834 -1592048 - L1MB7 LINE L1 -718 5466 4985 2452 133 8 8 chr20 70561861 70562245 -1591637 - L1MA5A LINE L1 -5 6292 5909 1271 184 18 0 chr20 70562245 70562517 -1591365 + L1 LINE L1 2861 3137 -3009 5394 238 60 11 chr20 70562520 70563202 -1590680 - L1MB7 LINE L1 -1144 5002 4355 441 0 0 0 chr20 70563202 70563251 -1590631 + (TG)n Simple_repeat Simple_repeat 2 50 0 5394 238 60 11 chr20 70563251 70564058 -1589824 - L1MB7 LINE L1 -1791 4355 3440 7761 224 57 58 chr20 70564061 70565860 -1588022 - L1MB8 LINE L1 -4 6672 4872 2122 144 12 3 chr20 70565860 70566186 -1587696 + L1PA14 LINE L1 5831 6159 -2 7761 224 57 58 chr20 70566186 70568756 -1585126 - L1MB8 LINE L1 -1804 4872 2587 2446 209 46 49 chr20 70568746 70569424 -1584458 - L1MB8 LINE L1 -5325 1217 542 * 5005 189 4 51 chr20 70569426 70570539 -1583343 - L1MC2 LINE L1 -11 6333 5274 1950 266 22 18 chr20 70570539 70571087 -1582795 - L1MB8 LINE L1 -5980 562 13 226 279 179 21 chr20 70571234 70571474 -1582408 + L2 LINE L2 1807 2084 -1230 238 262 7 117 chr20 70571616 70571663 -1582219 + L2 LINE L2 2224 2275 -1039 1067 174 133 113 chr20 70571663 70571956 -1581926 - AluJo SINE Alu 0 302 4 238 262 7 117 chr20 70571956 70572053 -1581829 + L2 LINE L2 2275 2352 -962 296 345 84 40 chr20 70572241 70572408 -1581474 + L2 LINE L2 2367 2525 -789 532 225 300 0 chr20 70572408 70572568 -1581314 - MER63A DNA MER1_type -2 208 1 296 345 84 40 chr20 70572568 70572878 -1581004 + L2 LINE L2 2525 2865 -449 366 300 62 31 chr20 70573009 70573139 -1580743 + L2 LINE L2 3180 3313 0 2533 175 17 21 chr20 70573390 70573869 -1580013 - L1MA4 LINE L1 0 6300 5824 2302 106 3 0 chr20 70574516 70574818 -1579064 - AluSp SINE Alu -10 303 1 1653 243 45 47 chr20 70574921 70575178 -1578704 + MER74A LTR ERVL 1 257 -301 2465 131 31 0 chr20 70575178 70575529 -1578353 - THE1B LTR MaLR -2 362 1 1653 243 45 47 chr20 70575529 70575801 -1578081 + MER74A LTR ERVL 257 529 -29 237 259 167 43 chr20 70575967 70576129 -1577753 + MIR SINE MIR 16 197 -65 219 333 13 13 chr20 70576355 70576433 -1577449 + MIR SINE MIR 37 114 -94 1490 191 152 51 chr20 70576433 70576920 -1576962 - MLT1E LTR MaLR -2 591 56 219 308 0 26 chr20 70577788 70577866 -1576016 + MIR3 SINE MIR 3 78 -130 645 245 110 14 chr20 70578065 70578347 -1575535 - L1MC5 LINE L1 -37 7924 7616 981 226 124 54 chr20 70578374 70578688 -1575194 - MER2 DNA MER2_type -8 337 2 227 170 43 0 chr20 70578707 70578754 -1575128 - L1MC5 LINE L1 -404 7557 7509 500 225 29 7 chr20 70578783 70578921 -1574961 - L1MC5 LINE L1 -520 7441 7301 1334 154 9 14 chr20 70579009 70579229 -1574653 - MER20 DNA MER1_type 0 219 1 2173 151 103 5 chr20 70579316 70579706 -1574176 - MSTA LTR MaLR 0 428 1 6864 73 12 0 chr20 70579832 70582025 -1571857 + L1PA7 LINE L1 3812 6153 -1 311 314 34 25 chr20 70582031 70582149 -1571733 - L1 LINE L1 -2409 3737 3619 233 258 34 34 chr20 70582681 70582770 -1571112 + MIR SINE MIR 66 154 -108 388 325 78 39 chr20 70583069 70583300 -1570582 - MIR SINE MIR -21 241 2 226 294 0 103 chr20 70584210 70584346 -1569536 - LTR67 LTR ERVL -7 550 429 280 336 57 7 chr20 70584813 70584953 -1568929 + L2 LINE L2 3123 3269 -44 223 317 24 0 chr20 70585513 70585595 -1568287 - L2 LINE L2 0 3313 3230 814 242 56 5 chr20 70585960 70586176 -1567706 + MIR SINE MIR 19 248 -14 329 316 10 0 chr20 70586787 70586885 -1566997 + MER5A DNA MER1_type 1 99 -90 610 263 73 28 chr20 70587184 70587431 -1566451 - MIR SINE MIR 0 262 5 702 207 50 6 chr20 70587626 70587805 -1566077 - MER5A DNA MER1_type 0 189 3 1089 192 5 37 chr20 70588642 70588856 -1565026 + MER44D DNA MER2_type 1 207 -498 3499 196 42 26 chr20 70588859 70589619 -1564263 - MER4E LTR ERV1 -7 772 1 2730 183 8 16 chr20 70589619 70590129 -1563753 + MER44D DNA MER2_type 200 705 0 2555 115 0 23 chr20 70591327 70591711 -1562171 - THE1C LTR MaLR 0 375 1 338 294 18 69 chr20 70592022 70592170 -1561712 + L1ME LINE L1 5546 5681 -440 836 199 62 24 chr20 70592170 70592381 -1561501 + MER20 DNA MER1_type 1 219 0 338 294 18 69 chr20 70592381 70592450 -1561432 + L1ME LINE L1 5681 5752 -369 1340 82 22 0 chr20 70592460 70592644 -1561238 + MLT2A1 LTR ERVL 1 188 -256 582 144 0 0 chr20 70592684 70592774 -1561108 - MLT2A1 LTR ERVL -216 228 139 * 1598 122 8 20 chr20 70592743 70592774 -1561108 + MLT2A1 LTR ERVL 161 191 -253 950 51 0 0 chr20 70592774 70592892 -1560990 + L1PA5 LINE L1 6037 6154 0 1598 122 8 20 chr20 70592892 70593107 -1560775 + MLT2A1 LTR ERVL 191 404 -40 315 214 0 29 chr20 70593109 70593179 -1560703 + L1MC4 LINE L1 6636 6703 -1339 351 109 0 0 chr20 70593184 70593239 -1560643 + MLT2A1 LTR ERVL 390 444 0 1668 184 10 7 chr20 70593253 70593552 -1560330 - AluJo SINE Alu -12 300 1 391 141 0 28 chr20 70593555 70593626 -1560256 + L1PA16 LINE L1 6095 6163 -3 22 0 0 0 chr20 70593686 70593708 -1560174 + AT_rich Low_complexity Low_complexity 1 22 0 2116 154 27 3 chr20 70593738 70594108 -1559774 + L1MC2 LINE L1 5958 6336 -8 189 121 0 0 chr20 70594721 70594754 -1559128 + (CA)n Simple_repeat Simple_repeat 2 34 0 261 136 23 159 chr20 70594757 70594845 -1559037 + L1ME4a LINE L1 5976 6051 -70 249 297 17 17 chr20 70595010 70595128 -1558754 - L1MC4 LINE L1 -119 7923 7806 442 270 39 72 chr20 70595133 70595399 -1558483 + LTR16A1 LTR ERVL 220 456 -1 436 293 40 66 chr20 70595794 70596067 -1557815 - L3 LINE CR1 -150 1427 1162 277 391 16 0 chr20 70596049 70596177 -1557705 - L2 LINE L2 -6 3307 3178 * 892 314 147 24 chr20 70597019 70597481 -1556401 - MLT1K LTR MaLR 0 588 70 2696 13 3 3 chr20 70597599 70597912 -1555970 - AluYb8 SINE Alu -5 313 1 330 283 62 45 chr20 70598098 70598275 -1555607 - MER5A DNA MER1_type -3 186 7 614 292 61 71 chr20 70598955 70599366 -1554516 - MLT1I LTR MaLR -2 407 1 1067 188 5 0 chr20 70599530 70599765 -1554117 + AluJb SINE Alu 85 320 0 336 262 48 48 chr20 70599998 70600185 -1553697 - L2 LINE L2 -101 3212 3026 876 286 93 26 chr20 70600994 70601371 -1552511 - L2 LINE L2 -2 3311 2910 299 207 46 103 chr20 70601890 70601977 -1551905 + L2 LINE L2 3231 3312 -1 449 200 0 0 chr20 70602693 70602768 -1551114 + MER81 DNA DNA 1 75 -39 850 187 7 7 chr20 70602771 70602926 -1550956 - FRAM SINE Alu -21 155 1 1075 207 16 12 chr20 70603618 70603860 -1550022 + L1MA7 LINE L1 5822 6064 -227 472 237 9 0 chr20 70603862 70603979 -1549903 + L1MA7 LINE L1 6161 6269 -22 24 85 0 0 chr20 70603991 70604050 -1549832 + AT_rich Low_complexity Low_complexity 1 59 0 1991 136 0 13 chr20 70604606 70604916 -1548966 + AluSg SINE Alu 5 310 0 1192 48 0 38 chr20 70604937 70605123 -1548759 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 393 284 153 17 chr20 70605260 70605436 -1548446 + MIR SINE MIR 63 262 0 1467 147 71 8 chr20 70606411 70606713 -1547169 - AluJb SINE Alu 0 319 1 350 349 24 18 chr20 70607523 70607689 -1546193 - MIR SINE MIR -76 186 20 1736 149 0 44 chr20 70607691 70608007 -1545875 - AluJo SINE Alu -10 302 1 482 219 124 7 chr20 70609154 70609291 -1544591 - MER63 DNA MER1_type -282 780 2 2949 167 30 2 chr20 70609420 70609918 -1543964 + MER41E LTR ERV1 1 512 0 493 317 122 18 chr20 70609918 70610538 -1543344 + L2 LINE L2 2566 3307 -6 315 71 0 0 chr20 70611337 70611379 -1542503 + (CA)n Simple_repeat Simple_repeat 1 42 0 21 0 0 0 chr20 70611853 70611874 -1542008 + AT_rich Low_complexity Low_complexity 1 21 0 988 168 9 0 chr20 70612571 70612758 -1541124 + L1MC1 LINE L1 5409 5607 -726 2978 168 37 2 chr20 70612758 70613269 -1540613 + Tigger7 DNA MER2_type 1 529 -1958 280 220 0 0 chr20 70613261 70613320 -1540562 + Tigger7 DNA MER2_type 2425 2483 -4 * 3449 187 49 7 chr20 70613324 70613533 -1540349 + L1MC1 LINE L1 5609 5808 -525 2282 102 0 0 chr20 70613533 70613837 -1540045 - AluSx SINE Alu -8 304 1 3449 187 49 7 chr20 70613837 70614317 -1539565 + L1MC1 LINE L1 5808 6327 -6 483 342 32 5 chr20 70615440 70615630 -1538252 - MIR SINE MIR -30 232 38 352 214 43 14 chr20 70615788 70615858 -1538024 + MER58A DNA MER1_type 3 74 -33 516 140 149 0 chr20 70615858 70615965 -1537917 - L1MB5 LINE L1 -14 6160 6038 1783 189 37 14 chr20 70615976 70616330 -1537552 + MLT1A1 LTR MaLR 4 365 0 584 170 23 59 chr20 70616358 70616494 -1537388 + MER58A DNA MER1_type 35 166 0 184 228 13 13 chr20 70616505 70616584 -1537298 + (TA)n Simple_repeat Simple_repeat 1 79 0 2763 163 96 155 chr20 70616595 70617550 -1536332 + MER21A LTR ERV1 24 922 -9 319 296 113 14 chr20 70617609 70617751 -1536131 + MIR SINE MIR 9 164 -98 195 273 23 0 chr20 70617755 70617799 -1536083 + L2 LINE L2 3210 3254 -18 262 320 48 8 chr20 70617831 70617956 -1535926 - MIR SINE MIR -70 192 63 1486 212 55 64 chr20 70619286 70619738 -1534144 - MLT1C LTR MaLR -9 458 11 254 328 201 5 chr20 70619871 70620075 -1533807 + MIR SINE MIR 19 262 0 719 163 84 22 chr20 70620514 70620692 -1533190 - MER53 DNA DNA 0 189 1 1229 268 62 95 chr20 70620766 70621364 -1532518 + MLT1G LTR MaLR 2 574 -16 1359 265 88 27 chr20 70621458 70621933 -1531949 + MLT1D LTR MaLR 1 504 -1 1983 115 7 3 chr20 70622110 70622398 -1531484 - AluSq SINE Alu -24 289 1 838 299 52 3 chr20 70623997 70624342 -1529540 - MER113 DNA MER1_type? 0 521 160 640 228 71 76 chr20 70624428 70624601 -1529281 - MER58A DNA MER1_type -2197 223 50 1950 106 3 11 chr20 70624601 70624908 -1528974 + AluSq SINE Alu 14 313 0 640 228 71 76 chr20 70624908 70624958 -1528924 - MER58A DNA MER1_type -2370 50 1 388 279 19 0 chr20 70625114 70625218 -1528664 + MER63A DNA MER1_type 77 182 -28 1428 216 18 102 chr20 70625280 70625634 -1528248 + MLT1C LTR MaLR 53 362 -105 2133 94 7 3 chr20 70625634 70625932 -1527950 + AluSp SINE Alu 1 299 -14 1428 216 18 102 chr20 70625932 70626030 -1527852 + MLT1C LTR MaLR 362 467 0 224 250 0 0 chr20 70626079 70626123 -1527759 - MIR SINE MIR -171 91 48 581 184 15 99 chr20 70627173 70627308 -1526574 + MER5A DNA MER1_type 13 144 -45 1951 141 0 13 chr20 70627308 70627613 -1526269 - AluSq SINE Alu -12 301 1 581 184 15 99 chr20 70627613 70627648 -1526234 + MER5A DNA MER1_type 144 180 -9 198 0 0 0 chr20 70628017 70628039 -1525843 + (A)n Simple_repeat Simple_repeat 1 22 0 2092 261 142 22 chr20 70628553 70629169 -1524713 + MER69B DNA AcHobo 43 808 -1718 1868 130 10 26 chr20 70629169 70629476 -1524406 + AluSx SINE Alu 1 302 -10 2092 261 142 22 chr20 70629476 70629785 -1524097 + MER69B DNA AcHobo 808 1079 -147 236 255 76 88 chr20 70630079 70630330 -1523552 - L2 LINE L2 -227 3086 2839 228 292 49 97 chr20 70631342 70631486 -1522396 + L2 LINE L2 3133 3269 -3 196 254 0 55 chr20 70631835 70631890 -1521992 + L3 LINE CR1 1393 1444 -133 344 290 116 49 chr20 70632248 70632593 -1521289 - L2 LINE L2 -20 3293 2926 248 321 82 23 chr20 70634041 70634270 -1519612 + L2 LINE L2 2799 3059 -213 521 202 0 0 chr20 70634489 70634588 -1519294 - FRAM SINE Alu -12 164 66 1062 176 0 0 chr20 70634593 70635136 -1518746 + (TGGA)n Simple_repeat Simple_repeat 1 543 0 270 0 0 0 chr20 70635137 70635167 -1518715 + (GGAA)n Simple_repeat Simple_repeat 2 31 0 245 208 13 0 chr20 70635170 70635247 -1518635 + (TGGA)n Simple_repeat Simple_repeat 4 81 0 392 215 0 0 chr20 70635250 70635315 -1518567 - FRAM/FAM SINE Alu -104 62 1 391 329 175 11 chr20 70637163 70637443 -1516439 - L2 LINE L2 0 3313 2988 315 230 157 78 chr20 70638013 70638204 -1515678 - MIR SINE MIR -55 207 2 * 316 323 15 45 chr20 70638204 70638314 -1515568 + L2 LINE L2 3207 3312 -1 209 171 0 0 chr20 70638314 70638349 -1515533 + GA-rich Low_complexity Low_complexity 2 36 0 2235 100 7 0 chr20 70638980 70639290 -1514592 - AluSp SINE Alu -1 312 1 278 305 133 0 chr20 70639532 70639660 -1514222 + MIR SINE MIR 48 192 -70 1346 134 48 167 chr20 70639744 70640247 -1513635 - Tigger2 DNA MER2_type 0 2718 1 324 293 130 0 chr20 70640248 70640371 -1513511 - MER113 DNA MER1_type? -119 402 264 180 0 0 0 chr20 70640691 70640711 -1513171 + (TG)n Simple_repeat Simple_repeat 2 21 0 1899 139 0 3 chr20 70641709 70642004 -1511878 - AluSx SINE Alu -17 295 2 2118 95 3 0 chr20 70642145 70642428 -1511454 - AluSc SINE Alu -25 284 1 1194 167 36 36 chr20 70643979 70644231 -1509651 - AluJo SINE Alu -18 294 43 2622 265 142 88 chr20 70644860 70644919 -1508963 - L2 LINE L2 -547 2767 2713 2053 132 0 0 chr20 70644919 70645208 -1508674 - AluSx SINE Alu -23 289 1 2622 265 142 88 chr20 70645208 70646511 -1507371 - L2 LINE L2 -601 2713 1244 546 54 0 0 chr20 70646511 70646585 -1507297 + (TG)n Simple_repeat Simple_repeat 2 75 0 2622 265 142 88 chr20 70646585 70647371 -1506511 - L2 LINE L2 -2070 1244 502 225 0 0 0 chr20 70647937 70647962 -1505920 + (TA)n Simple_repeat Simple_repeat 2 26 0 358 158 60 0 chr20 70648338 70648643 -1505239 + (TA)n Simple_repeat Simple_repeat 1 323 0 207 274 81 0 chr20 70650903 70650965 -1502917 - MIR SINE MIR -7 255 189 993 230 154 51 chr20 70650968 70651416 -1502466 + MLT1D LTR MaLR 5 498 -7 3050 149 56 10 chr20 70651640 70652144 -1501738 + MER1A DNA MER1_type 1 527 0 190 341 118 0 chr20 70652312 70652397 -1501485 + MIR SINE MIR 19 113 -149 2408 52 0 7 chr20 70652404 70652713 -1501169 - AluY SINE Alu -4 307 1 476 299 123 19 chr20 70653874 70654285 -1499597 + L2 LINE L2 2567 3015 -257 1620 166 3 7 chr20 70654285 70654593 -1499289 - AluJb SINE Alu 0 307 1 369 350 82 52 chr20 70654898 70655338 -1498544 + L3 LINE CR1 927 1379 -198 368 268 76 32 chr20 70655367 70655524 -1498358 + MIR SINE MIR 81 244 -18 2230 107 40 35 chr20 70657111 70657484 -1496398 - THE1C LTR MaLR 0 375 1 491 309 87 14 chr20 70657531 70657738 -1496144 - MIR SINE MIR -17 245 24 2524 128 59 2 chr20 70658345 70658750 -1495132 + MSTA LTR MaLR 1 428 0 9339 163 18 22 chr20 70658750 70660407 -1493475 + MSTA-int LTR MaLR 1 1651 0 1987 192 86 8 chr20 70660408 70660600 -1493282 + MSTA LTR MaLR 1 177 -251 282 29 0 0 chr20 70660600 70660635 -1493247 + (TC)n Simple_repeat Simple_repeat 1 35 0 1987 192 86 8 chr20 70660635 70660837 -1493045 + MSTA LTR MaLR 177 426 -2 278 234 7 37 chr20 70662053 70662213 -1491669 + CT-rich Low_complexity Low_complexity 1 155 0 4091 131 15 3 chr20 70662245 70662854 -1491028 - MER51A LTR ERV1 -18 616 1 1617 254 50 65 chr20 70662855 70663910 -1489972 - MER51A-int LTR ERV1 0 8185 7365 301 236 50 57 chr20 70664448 70664588 -1489294 - MER51A-int LTR ERV1 -1574 6825 6687 1252 304 36 42 chr20 70665178 70665865 -1488017 - MER51A-int LTR ERV1 -1684 6072 5390 * 1411 137 34 21 chr20 70665864 70666324 -1487558 - LOR1-int LTR ERV1 -2416 4173 3721 6856 26 0 9 chr20 70666324 70667120 -1486762 + L1PA3 LINE L1 5367 6155 0 1411 137 34 21 chr20 70667120 70667136 -1486746 - LOR1-int LTR ERV1 -2868 3721 1768 1344 120 33 4 chr20 70667145 70667386 -1486496 - LOR1-int LTR ERV1 -6322 1798 1551 202 274 200 0 chr20 70668486 70668581 -1485301 - L3 LINE CR1 -101 1476 1363 2222 104 0 3 chr20 70668756 70669054 -1484828 + AluSq SINE Alu 1 297 -16 246 300 15 15 chr20 70669267 70669397 -1484485 + (TATATG)n Simple_repeat Simple_repeat 3 132 0 790 257 105 56 chr20 70669547 70670152 -1483730 - MER77 LTR ERV1 -4 601 54 285 318 108 34 chr20 70670336 70670512 -1483370 + MER5A DNA MER1_type 1 189 0 3981 94 4 7 chr20 70670774 70671335 -1482547 + L1PA13 LINE L1 5602 6160 -3 1637 171 3 23 chr20 70672254 70672553 -1481329 + AluSx SINE Alu 1 293 -19 21 0 0 0 chr20 70674187 70674208 -1479674 + AT_rich Low_complexity Low_complexity 1 21 0 941 196 88 20 chr20 70675265 70675469 -1478413 - MER20 DNA MER1_type 0 219 2 274 256 0 13 chr20 70675621 70675699 -1478183 + (TG)n Simple_repeat Simple_repeat 1 77 0 198 71 0 0 chr20 70675720 70675748 -1478134 + (TG)n Simple_repeat Simple_repeat 1 28 0 1832 129 0 21 chr20 70678131 70678447 -1475435 - AluSg SINE Alu 0 310 1 2035 116 13 7 chr20 70678615 70678918 -1474964 + AluSx SINE Alu 1 305 -7 623 259 197 0 chr20 70678929 70679122 -1474760 - MIR SINE MIR -25 237 7 456 264 62 14 chr20 70681192 70681336 -1472546 - MIR SINE MIR -72 190 40 455 338 84 25 chr20 70682284 70682607 -1471275 - L2 LINE L2 0 3313 2972 201 214 0 0 chr20 70683310 70683352 -1470530 - L2 LINE L2 -548 2766 2725 239 218 192 0 chr20 70683539 70683617 -1470265 - MIR SINE MIR -122 140 48 446 281 25 46 chr20 70683649 70683845 -1470037 - MER20 DNA MER1_type -1 218 27 2041 92 7 18 chr20 70686885 70687169 -1466713 - AluSg SINE Alu -3 307 27 198 0 0 0 chr20 70687941 70687963 -1465919 + (T)n Simple_repeat Simple_repeat 1 22 0 343 255 70 124 chr20 70688207 70688466 -1465416 + MIR SINE MIR 11 255 -7 193 241 38 25 chr20 70688475 70688554 -1465328 - MER5C DNA MER1_type -89 235 156 444 310 112 11 chr20 70688640 70688827 -1465055 - MIR SINE MIR -10 252 47 405 312 0 45 chr20 70689533 70689687 -1464195 + LTR67 LTR ERVL 403 549 -8 2016 131 0 0 chr20 70689822 70690112 -1463770 + AluSx SINE Alu 1 290 -22 396 0 0 0 chr20 70690556 70690600 -1463282 + (CA)n Simple_repeat Simple_repeat 2 45 0 509 275 73 17 chr20 70692330 70692508 -1461374 + MIR SINE MIR 17 204 -58 726 261 38 0 chr20 70692528 70692739 -1461143 - MER20 DNA MER1_type 0 219 1 281 278 23 98 chr20 70693334 70693467 -1460415 + L2 LINE L2 3150 3272 0 2412 67 0 0 chr20 70694893 70695190 -1458692 - AluY SINE Alu -14 297 1 1223 247 41 21 chr20 70695201 70695654 -1458228 - L1MD3 LINE L1 0 8041 7589 309 301 67 42 chr20 70696509 70696748 -1457134 + LTR16C LTR ERVL 185 429 -62 300 330 74 37 chr20 70697671 70697886 -1455996 - MIR SINE MIR -10 252 30 302 324 108 0 chr20 70698464 70698603 -1455279 - MIR SINE MIR -1 261 108 1076 271 117 29 chr20 70698695 70699149 -1454733 - MLT1E2 LTR MaLR -5 621 128 238 378 0 0 chr20 70699413 70699503 -1454379 + GA-rich Low_complexity Low_complexity 4 93 0 694 230 32 3 chr20 70699794 70699967 -1453915 + MER5A DNA MER1_type 5 175 -3 281 338 25 19 chr20 70699963 70700123 -1453759 + MIR SINE MIR 3 163 -99 * 197 173 0 135 chr20 70700330 70700382 -1453500 - L2 LINE L2 -88 3225 3181 1917 142 80 14 chr20 70700968 70701320 -1452562 + THE1C LTR MaLR 1 375 0 348 164 23 39 chr20 70701678 70701806 -1452076 + GA-rich Low_complexity Low_complexity 2 127 0 2264 88 3 0 chr20 70701915 70702222 -1451660 + AluY SINE Alu 1 308 -3 323 254 71 73 chr20 70702282 70702532 -1451350 - MLT1G1 LTR MaLR -342 213 4 2124 122 0 0 chr20 70702896 70703199 -1450683 + AluSq SINE Alu 9 311 -2 300 250 0 66 chr20 70703199 70703275 -1450607 - MIR SINE MIR -160 102 32 231 175 133 133 chr20 70703328 70703448 -1450434 + MER5A DNA MER1_type 35 154 -35 * 359 208 111 90 chr20 70703343 70703487 -1450395 - MER5A DNA MER1_type -33 156 10 195 272 0 0 chr20 70704820 70704934 -1448948 + CT-rich Low_complexity Low_complexity 1 114 0 289 313 7 20 chr20 70705017 70705164 -1448718 + CT-rich Low_complexity Low_complexity 3 147 0 1647 237 62 27 chr20 70705772 70706210 -1447672 + MLT1C LTR MaLR 6 458 -9 677 237 47 39 chr20 70706352 70706609 -1447273 - LTR16C LTR ERVL 0 491 233 710 204 37 0 chr20 70706886 70707048 -1446834 - L1MD3 LINE L1 -4 7991 7824 2136 204 10 26 chr20 70707439 70707929 -1445953 - L1MB7 LINE L1 -9 6175 5694 390 289 225 11 chr20 70708097 70708284 -1445598 - MIR SINE MIR -19 243 17 578 225 0 0 chr20 70709875 70709986 -1443896 - MER81 DNA DNA 0 114 4 417 218 69 0 chr20 70710059 70710146 -1443736 - L2 LINE L2 -16 3297 3205 1297 191 112 16 chr20 70710488 70710791 -1443091 - MLT1A1 LTR MaLR -33 332 1 740 265 52 62 chr20 70711274 70711565 -1442317 + MLT1G1 LTR MaLR 115 402 -193 277 289 22 0 chr20 70711557 70711647 -1442235 + MLT1G1 LTR MaLR 504 595 0 * 275 324 52 66 chr20 70712352 70712565 -1441317 - MIR SINE MIR -41 221 12 368 270 107 25 chr20 70713437 70713596 -1440286 + MLT1J LTR MaLR 138 309 -202 349 271 105 34 chr20 70713925 70714174 -1439708 + L1ME4a LINE L1 2253 2519 -3863 356 284 35 59 chr20 70714196 70714365 -1439517 + L1ME4a LINE L1 4082 4246 -2136 586 323 108 42 chr20 70714495 70714969 -1438913 + L1ME4a LINE L1 4448 4952 -1430 552 207 0 0 chr20 70715165 70715276 -1438606 + L1MA7 LINE L1 6175 6285 -6 21 0 0 0 chr20 70715282 70715303 -1438579 + AT_rich Low_complexity Low_complexity 1 21 0 251 266 55 18 chr20 70715461 70715570 -1438312 + L1ME4a LINE L1 5491 5603 -2441 365 266 73 18 chr20 70715757 70715975 -1437907 + L1ME4a LINE L1 5861 6090 -267 249 370 111 70 chr20 70716822 70717092 -1436790 - L2 LINE L2 -75 3197 2917 210 318 139 8 chr20 70717817 70717946 -1435936 - MER91A DNA MER1_type -32 164 19 305 290 52 84 chr20 70718122 70718277 -1435605 + L1MC/D LINE L1 5322 5471 -2337 304 336 25 0 chr20 70718299 70718418 -1435464 - L2 LINE L2 -1 3271 3150 835 213 13 80 chr20 70718420 70718645 -1435237 - MER20 DNA MER1_type 0 219 10 264 298 34 22 chr20 70718650 70718828 -1435054 + L1MEd LINE L1 1150 1329 -4876 271 313 68 18 chr20 70719047 70719210 -1434672 + L1ME3A LINE L1 479 649 -5556 463 291 110 99 chr20 70719295 70719769 -1434113 + HAL1 LINE L1 849 1327 -1180 443 340 73 7 chr20 70719808 70720111 -1433771 + L1ME3A LINE L1 1403 1725 -4671 1979 103 20 20 chr20 70720319 70720619 -1433263 + AluSx SINE Alu 1 300 -12 403 319 78 70 chr20 70720689 70720959 -1432923 + L1ME3A LINE L1 2033 2304 -4092 431 332 115 23 chr20 70721458 70721850 -1432032 + L1ME3A LINE L1 4685 5112 -1103 564 268 44 25 chr20 70721851 70722048 -1431834 - MIR SINE MIR 0 262 64 266 297 35 55 chr20 70722070 70722155 -1431727 + L1ME3A LINE L1 5116 5201 -1014 1670 152 14 17 chr20 70722155 70722451 -1431431 + AluJo SINE Alu 1 295 -17 266 297 35 55 chr20 70722451 70722655 -1431227 + L1ME3A LINE L1 5201 5399 -816 261 224 47 12 chr20 70722685 70722770 -1431112 + L1ME3A LINE L1 5451 5538 -2339 227 308 53 0 chr20 70723002 70723135 -1430747 + L1ME LINE L1 5854 5993 -197 773 155 6 2 chr20 70723203 70723379 -1430503 + MER2 DNA MER2_type 1 210 -135 180 111 0 0 chr20 70723528 70723555 -1430327 + (TTTTC)n Simple_repeat Simple_repeat 2 28 0 918 201 10 16 chr20 70724264 70724458 -1429424 - MLT1C LTR MaLR 0 467 275 785 236 0 39 chr20 70724585 70724799 -1429083 + AluJb SINE Alu 118 324 0 758 233 12 17 chr20 70724802 70724974 -1428908 - MLT1C LTR MaLR -69 296 126 212 245 153 20 chr20 70725229 70725327 -1428555 - L2 LINE L2 0 3272 3162 408 290 70 15 chr20 70725367 70725567 -1428315 + MIR SINE MIR 51 261 -1 450 103 0 0 chr20 70726069 70726127 -1427755 + Alu SINE Alu 228 285 -25 185 0 0 39 chr20 70726128 70726154 -1427728 + (TTAAA)n Simple_repeat Simple_repeat 1 25 0 1077 182 55 5 chr20 70726154 70726374 -1427508 + MER66B LTR ERV1 256 486 0 254 336 0 29 chr20 70726391 70726495 -1427387 + MIR SINE MIR 119 219 -43 414 291 180 28 chr20 70726555 70727026 -1426856 + L2 LINE L2 2521 3068 -245 190 343 46 19 chr20 70727064 70727172 -1426710 + L2 LINE L2 3112 3222 -50 792 259 87 11 chr20 70728143 70728429 -1425453 - L1ME LINE L1 -572 5592 5285 1783 257 67 19 chr20 70728431 70729002 -1424880 + L1ME3A LINE L1 5641 6238 -1 978 149 51 51 chr20 70729196 70729410 -1424472 + MER20 DNA MER1_type 5 218 -1 234 210 177 0 chr20 70729411 70729473 -1424409 - MIR3 SINE MIR -48 160 88 2850 175 25 23 chr20 70730405 70731042 -1422840 + L1 LINE L1 4782 5421 -743 1990 162 0 0 chr20 70731077 70731373 -1422509 - AluSx SINE Alu -16 296 1 330 333 0 17 chr20 70731381 70731501 -1422381 - MIR SINE MIR -67 141 24 225 247 93 62 chr20 70731506 70731603 -1422279 - MLT1L LTR MaLR -8 607 508 231 318 30 0 chr20 70731644 70731710 -1422172 - MLT1L LTR MaLR -196 419 352 1998 167 31 0 chr20 70731758 70732081 -1421801 - MER2 DNA MER2_type 0 345 13 2040 120 21 0 chr20 70732545 70732828 -1421054 + AluSq SINE Alu 19 307 -6 265 350 56 0 chr20 70732945 70733105 -1420777 - L1MC4a LINE L1 -1842 5966 5798 417 297 26 12 chr20 70733256 70733471 -1420411 - MIR SINE MIR -34 228 12 289 330 0 0 chr20 70734544 70734644 -1419238 + MIR SINE MIR 114 213 -49 364 261 82 0 chr20 70735584 70735718 -1418164 - MER117 DNA MER1_type -31 166 22 1790 169 6 16 chr20 70738480 70738793 -1415089 + AluJo SINE Alu 1 310 -2 297 301 55 42 chr20 70738793 70739018 -1414864 + L1MC/D LINE L1 5551 5781 -340 204 40 0 0 chr20 70739189 70739214 -1414668 + (CA)n Simple_repeat Simple_repeat 2 26 0 789 326 48 25 chr20 70739351 70739910 -1413972 - HAL1 LINE L1 -769 1738 1167 491 291 144 22 chr20 70741748 70741907 -1411975 + L2 LINE L2 2634 2772 -541 1679 147 112 95 chr20 70741907 70742249 -1411633 + MSTA LTR MaLR 1 336 -92 2257 96 3 0 chr20 70742249 70742541 -1411341 + AluY SINE Alu 1 293 -18 1679 147 112 95 chr20 70742541 70742577 -1411305 + MSTA LTR MaLR 336 370 -58 2335 103 0 25 chr20 70742577 70742896 -1410986 - AluSx SINE Alu -1 311 1 1679 147 112 95 chr20 70742896 70742937 -1410945 + MSTA LTR MaLR 370 428 0 491 291 144 22 chr20 70742937 70743380 -1410502 + L2 LINE L2 2772 3300 -13 22 0 0 0 chr20 70743400 70743422 -1410460 + AT_rich Low_complexity Low_complexity 1 22 0 2810 190 8 4 chr20 70743495 70744017 -1409865 + L1MB4 LINE L1 5585 6108 -72 293 189 27 0 chr20 70744018 70744092 -1409790 + (CATATA)n Simple_repeat Simple_repeat 2 77 0 21 36 0 0 chr20 70745090 70745118 -1408764 + AT_rich Low_complexity Low_complexity 1 28 0 2119 112 7 14 chr20 70745184 70745480 -1408402 + AluJb SINE Alu 1 294 -18 432 306 20 15 chr20 70746260 70746459 -1407423 + MIR SINE MIR 61 260 -2 1959 193 55 10 chr20 70746482 70746886 -1406996 + L1MC3 LINE L1 7355 7776 -9 715 231 153 84 chr20 70747865 70748345 -1405537 + MLT1K LTR MaLR 23 579 -9 3182 224 15 69 chr20 70748673 70750044 -1403838 + L1PA10 LINE L1 8 1504 -4957 * 20334 133 22 8 chr20 70750031 70754161 -1399721 + L1PA10 LINE L1 2312 6482 -1 717 244 21 43 chr20 70756701 70756935 -1396947 + MIR SINE MIR 31 259 -3 607 205 118 13 chr20 70756983 70757373 -1396509 - LTR54B LTR ERV1 -20 490 1 362 268 263 16 chr20 70757578 70757768 -1396114 + MIR SINE MIR 14 250 -12 1304 249 68 0 chr20 70758618 70758944 -1394938 + L1MD2 LINE L1 5795 6142 -217 1312 224 53 17 chr20 70758945 70759389 -1394493 - MER39 LTR ERV1 0 707 193 1256 188 80 11 chr20 70759391 70759667 -1394215 - MLT1A1 LTR MaLR -70 295 1 665 237 47 30 chr20 70759667 70759836 -1394046 + L1MD2 LINE L1 6153 6324 -35 233 368 9 0 chr20 70759890 70760004 -1393878 + MIR SINE MIR 52 166 -96 320 300 83 37 chr20 70761105 70761606 -1392276 + L1ME3A LINE L1 1262 1794 -4746 21 0 0 0 chr20 70761657 70761678 -1392204 + AT_rich Low_complexity Low_complexity 1 21 0 347 304 5 60 chr20 70761713 70761930 -1391952 + L1ME3A LINE L1 1791 1995 -4726 1116 304 67 22 chr20 70762069 70762970 -1390912 + L1ME3A LINE L1 2202 3105 -3435 482 266 48 10 chr20 70763011 70763218 -1390664 + L1ME3A LINE L1 3348 3562 -2978 569 189 0 0 chr20 70763218 70763313 -1390569 + AluJ/FLAM SINE Alu 2 96 -216 1518 265 95 66 chr20 70763320 70763674 -1390208 + L1ME3A LINE L1 4503 4845 -1719 3809 40 0 0 chr20 70763674 70764123 -1389759 + L1PA3 LINE L1 5704 6152 -3 1518 265 95 66 chr20 70764123 70764508 -1389374 + L1ME3A LINE L1 4845 5217 -1347 1131 172 9 32 chr20 70764508 70764729 -1389153 - MER20 DNA MER1_type -3 216 1 1518 265 95 66 chr20 70764729 70765469 -1388413 + L1ME3A LINE L1 5217 6055 -509 912 245 93 57 chr20 70765469 70765910 -1387972 + LTR16A1 LTR ERVL 1 457 0 1518 265 95 66 chr20 70765910 70766328 -1387554 + L1ME3A LINE L1 6055 6459 -105 342 280 75 0 chr20 70766664 70766771 -1387111 - L2 LINE L2 -2 3311 3197 252 228 18 0 chr20 70767290 70767347 -1386535 + MER116 DNA Mariner 14 71 -9 2201 97 0 0 chr20 70767480 70767789 -1386093 + AluSg SINE Alu 1 309 0 802 292 43 26 chr20 70768977 70769398 -1384484 + L1ME3 LINE L1 5692 6119 -43 1554 161 24 0 chr20 70769620 70769911 -1383971 + L1MB3 LINE L1 5886 6183 0 409 328 33 6 chr20 70770752 70770932 -1382950 - MIR SINE MIR -77 185 1 601 207 43 0 chr20 70771089 70771205 -1382677 + MER45A DNA AcHobo 58 178 0 229 246 130 0 chr20 70771672 70771741 -1382141 + MLT1K LTR MaLR 315 392 -196 271 245 80 50 chr20 70772018 70772218 -1381664 + MLT1K LTR MaLR 383 588 0 864 261 73 59 chr20 70772257 70772733 -1381149 + L1MC5 LINE L1 6742 7224 -737 329 294 0 10 chr20 70772739 70772841 -1381041 + CT-rich Low_complexity Low_complexity 2 102 0 192 77 0 0 chr20 70772841 70772867 -1381015 + (CA)n Simple_repeat Simple_repeat 1 26 0 1122 210 122 20 chr20 70772915 70773324 -1380558 + L1MC5 LINE L1 7274 7724 -237 25 31 0 0 chr20 70773456 70773488 -1380394 + AT_rich Low_complexity Low_complexity 1 32 0 8018 127 20 25 chr20 70773496 70774797 -1379085 + HSMAR2 DNA Mariner 9 1302 0 824 207 23 23 chr20 70775034 70775260 -1378622 + MER33 DNA MER1_type 1 221 -88 378 175 0 0 chr20 70775263 70775326 -1378556 - AluS SINE Alu -8 293 231 1330 89 28 11 chr20 70775326 70775505 -1378377 + AluSq SINE Alu 14 195 -118 462 193 37 0 chr20 70775505 70775614 -1378268 + MER33 DNA MER1_type 249 361 -2 357 273 10 0 chr20 70775647 70775746 -1378136 + MER94 DNA DNA 1 100 -34 2430 65 3 36 chr20 70776136 70776444 -1377438 - AluY SINE Alu -13 298 1 301 264 102 28 chr20 70777402 70777604 -1376278 - MIR SINE MIR -10 252 36 192 40 0 0 chr20 70777685 70777710 -1376172 + (TTCA)n Simple_repeat Simple_repeat 1 25 0 788 251 75 35 chr20 70778156 70778411 -1375471 + Charlie8 DNA MER1_type 1 265 -2152 773 253 99 54 chr20 70778734 70779033 -1374849 - MLT1H LTR MaLR 0 549 232 1678 183 40 60 chr20 70779033 70779431 -1374451 - MLT1B LTR MaLR 0 390 1 773 253 99 54 chr20 70779431 70779463 -1374419 - MLT1H LTR MaLR -317 232 203 375 268 158 14 chr20 70779718 70779927 -1373955 + MLT1L LTR MaLR 143 381 -234 351 298 49 58 chr20 70780621 70780826 -1373056 - MLT1L LTR MaLR -4 611 409 567 218 145 85 chr20 70782720 70783144 -1370738 + MLT1K LTR MaLR 5 525 -63 341 295 43 22 chr20 70783919 70784058 -1369824 + HAL1 LINE L1 1176 1317 -1190 320 219 44 77 chr20 70784166 70784349 -1369533 - L1MC5 LINE L1 -215 7746 7570 304 187 16 53 chr20 70784412 70784599 -1369283 + (TA)n Simple_repeat Simple_repeat 1 180 0 1331 256 87 111 chr20 70784630 70785967 -1367915 - L1MC5 LINE L1 -356 7605 6292 738 310 83 10 chr20 70786077 70786474 -1367408 - L1ME4a LINE L1 -105 6016 5591 2181 116 0 3 chr20 70786567 70786869 -1367013 - AluSx SINE Alu -11 301 1 334 314 54 75 chr20 70787027 70787307 -1366575 - L2 LINE L2 -80 3192 2919 396 250 83 0 chr20 70788677 70788797 -1365085 - L1ME3A LINE L1 -9 6161 6032 637 270 28 0 chr20 70788875 70789056 -1364826 - L1ME3A LINE L1 -332 5830 5642 198 352 70 23 chr20 70789519 70789647 -1364235 - MIR SINE MIR -59 203 70 1428 208 60 36 chr20 70789913 70790245 -1363637 - MER58B DNA MER1_type 0 341 2 258 325 60 24 chr20 70790306 70790472 -1363410 - MLT1K LTR MaLR -5 583 412 201 291 0 0 chr20 70790481 70790567 -1363315 + CT-rich Low_complexity Low_complexity 3 88 0 243 96 0 0 chr20 70790636 70790674 -1363208 - L1P4 LINE L1 -374 5791 5754 1130 292 65 26 chr20 70791105 70791584 -1362298 + L1ME2 LINE L1 1171 1630 -5492 3531 118 10 2 chr20 70791584 70792084 -1361798 - L1PA13 LINE L1 -5 6158 5655 1130 292 65 26 chr20 70792084 70792621 -1361261 + L1ME2 LINE L1 1630 2440 -4682 3994 272 94 28 chr20 70792663 70792790 -1361092 + L1ME2 LINE L1 2588 2705 -4236 2048 101 33 0 chr20 70792790 70793066 -1360816 + AluSc SINE Alu 5 289 -20 3994 272 94 28 chr20 70793066 70795499 -1358383 + L1ME2 LINE L1 2705 5261 -1680 1761 170 50 6 chr20 70795501 70795828 -1358054 - MER7A DNA MER2_type 0 346 7 3100 245 67 29 chr20 70795877 70797415 -1356467 + L1ME2 LINE L1 5313 6958 -1 271 272 80 62 chr20 70797881 70798043 -1355839 + L3 LINE CR1 1399 1563 -14 3567 177 58 9 chr20 70799987 70800665 -1353217 - MER50 LTR ERV1 -23 711 1 1118 194 61 82 chr20 70801671 70801850 -1352032 - MLT1B LTR MaLR 0 390 209 5759 126 45 9 chr20 70801850 70802720 -1351162 + MER4D LTR ERV1 1 901 -2 1118 194 61 82 chr20 70802720 70802837 -1351045 - MLT1B LTR MaLR -181 209 101 2648 92 157 5 chr20 70802837 70803226 -1350656 - LTR7 LTR ERV1 -2 448 1 1118 194 61 82 chr20 70803226 70803305 -1350577 - MLT1B LTR MaLR -289 101 22 402 306 8 0 chr20 70803349 70803473 -1350409 - L2 LINE L2 -255 3058 2934 212 312 64 18 chr20 70803473 70803582 -1350300 - L2 LINE L2 -924 2390 2277 3262 191 4 2 chr20 70804853 70805404 -1348478 - MER41D LTR ERV1 0 557 6 3030 251 87 64 chr20 70805594 70805725 -1348157 + L1MCa LINE L1 17 144 -6282 1234 215 179 38 chr20 70805725 70806172 -1347710 + LTR54 LTR ERV1 1 510 0 3030 251 87 64 chr20 70806172 70807476 -1346406 + L1MCa LINE L1 144 1485 -4941 229 266 89 16 chr20 70807541 70807665 -1346217 + L1MCa LINE L1 2058 2190 -4236 186 314 87 30 chr20 70807714 70807959 -1345923 + MIR SINE MIR 7 262 0 864 213 44 11 chr20 70807970 70808153 -1345729 + MER5A DNA MER1_type 1 189 0 180 275 0 0 chr20 70808313 70808353 -1345529 + L2 LINE L2 3258 3297 -16 1941 155 74 104 chr20 70808655 70809127 -1344755 - LTR32 LTR ERVL -1 470 13 267 287 66 81 chr20 70809546 70809818 -1344064 + L1ME LINE L1 5387 5654 -467 1095 206 52 0 chr20 70810644 70810892 -1342990 + LTR43 LTR ERV1 176 436 -166 34 65 0 0 chr20 70811447 70811509 -1342373 + AT_rich Low_complexity Low_complexity 1 62 0 206 300 144 0 chr20 70811608 70811698 -1342184 + L2 LINE L2 3180 3282 -31 533 92 53 0 chr20 70811971 70812047 -1341835 + MADE1 DNA Mariner 1 80 0 214 186 23 0 chr20 70812695 70812738 -1341144 + L2 LINE L2 3148 3191 -81 224 277 77 0 chr20 70813105 70813170 -1340712 + MIR SINE MIR 105 174 -88 3548 88 72 4 chr20 70813282 70813780 -1340102 - L1MA2 LINE L1 0 6304 5773 1441 231 41 65 chr20 70814072 70814531 -1339351 - MER101 LTR ERV1 -16 458 11 355 78 20 0 chr20 70814605 70814656 -1339226 - MLT2B1 LTR ERVL -4 516 465 301 131 33 0 chr20 70814658 70814719 -1339163 + (TA)n Simple_repeat Simple_repeat 2 64 0 315 253 11 22 chr20 70814720 70814811 -1339071 - L1MC4 LINE L1 -1339 6703 6614 297 0 0 0 chr20 70814811 70814844 -1339038 + (CA)n Simple_repeat Simple_repeat 2 34 0 2144 135 3 3 chr20 70814883 70815195 -1338687 + AluSx SINE Alu 1 312 0 1539 214 112 27 chr20 70815196 70815607 -1338275 - MLT2B1 LTR ERVL -74 446 1 234 300 0 0 chr20 70817090 70817160 -1336722 + L2 LINE L2 2683 2752 -562 1865 239 62 14 chr20 70817162 70817681 -1336201 + L1MC3 LINE L1 7240 7783 -2 240 323 141 0 chr20 70818167 70818266 -1335616 - L2 LINE L2 -1 3271 3159 616 260 16 76 chr20 70818901 70819205 -1334677 - L1ME LINE L1 -302 5819 5534 23 54 0 0 chr20 70819330 70819367 -1334515 + AT_rich Low_complexity Low_complexity 1 37 0 5182 207 26 34 chr20 70819618 70821260 -1332622 - L1MD2 LINE L1 0 6359 4735 606 372 11 3 chr20 70821282 70821564 -1332318 + ERVL LTR ERVL 4638 4921 -843 2266 125 0 0 chr20 70821868 70822180 -1331702 - AluSx SINE Alu 0 312 1 1517 190 17 10 chr20 70822214 70822504 -1331378 - MLT2B3 LTR ERVL -13 541 250 756 142 0 0 chr20 70822505 70822618 -1331264 - L1MC/D LINE L1 -632 5610 5498 893 227 79 0 chr20 70822688 70822904 -1330978 - MLT2B3 LTR ERVL -321 233 1 311 276 10 31 chr20 70823358 70823456 -1330426 + MLT2E LTR ERVL 32 127 -501 342 0 0 0 chr20 70824151 70824189 -1329693 + (TTTTA)n Simple_repeat Simple_repeat 2 39 0 525 303 74 22 chr20 70824913 70825144 -1328738 - MIR SINE MIR 0 262 20 180 239 0 0 chr20 70826143 70826189 -1327693 + L2 LINE L2 3267 3312 -1 258 292 149 0 chr20 70826211 70826379 -1327503 + MIR SINE MIR 55 247 -15 273 286 99 42 chr20 70826679 70826871 -1327011 + MIR SINE MIR 24 226 -36 226 310 65 10 chr20 70827700 70827851 -1326031 + MIR SINE MIR 10 169 -53 216 97 0 0 chr20 70828589 70828620 -1325262 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 1076 150 35 57 chr20 70828868 70829023 -1324859 + L1MA8 LINE L1 6070 6220 -71 2304 80 14 0 chr20 70829023 70829312 -1324570 - AluY SINE Alu -17 294 2 1076 150 35 57 chr20 70829312 70829383 -1324499 + L1MA8 LINE L1 6220 6291 0 396 246 33 16 chr20 70831255 70831377 -1322505 + LTR67 LTR ERVL 431 554 -3 273 267 160 38 chr20 70831562 70831693 -1322189 - MIR SINE MIR -109 153 7 567 202 106 53 chr20 70833159 70833367 -1320515 - MER20 DNA MER1_type 0 219 1 768 213 41 10 chr20 70834623 70834820 -1319062 - MLT1C LTR MaLR -15 452 250 293 280 53 58 chr20 70834818 70835007 -1318875 - MER65A LTR ERV1 -9 436 249 * 875 179 99 10 chr20 70835277 70835478 -1318404 - MLT1C LTR MaLR -243 224 6 185 399 84 17 chr20 70836345 70836583 -1317299 + L2 LINE L2 3011 3264 -8 557 307 94 39 chr20 70836602 70836983 -1316899 - L2 LINE L2 0 3313 2912 499 227 0 45 chr20 70838386 70838540 -1315342 + LTR16A LTR ERVL 146 292 -158 559 115 0 0 chr20 70839197 70839275 -1314607 - MADE1 DNA Mariner 0 80 3 6399 134 54 40 chr20 70839614 70840097 -1313785 - Tigger3b DNA MER2_type -1797 1231 756 2125 130 14 0 chr20 70840097 70840389 -1313493 + AluSx SINE Alu 1 296 -16 6399 134 54 40 chr20 70840389 70841119 -1312763 - Tigger3b DNA MER2_type -2272 756 1 250 279 18 54 chr20 70841235 70841346 -1312536 - MIR3 SINE MIR -2 206 100 835 222 0 12 chr20 70841474 70841645 -1312237 - MER45A DNA AcHobo -7 171 3 454 282 112 38 chr20 70841749 70842100 -1311782 + MLT1K LTR MaLR 194 605 -10 527 265 82 53 chr20 70842153 70842508 -1311374 + L1MC4a LINE L1 5564 5928 -1880 2293 104 17 0 chr20 70842945 70843244 -1310638 - AluSx SINE Alu -8 304 1 1434 244 7 0 chr20 70843307 70843598 -1310284 + AluJo SINE Alu 1 293 -19 286 267 175 25 chr20 70843647 70843767 -1310115 - L2 LINE L2 -2 3270 3133 850 141 0 0 chr20 70844051 70844186 -1309696 + AluSg/x SINE Alu 169 303 -7 2439 159 26 14 chr20 70844471 70844892 -1308990 + MSTB LTR MaLR 1 426 0 502 237 43 0 chr20 70845127 70845266 -1308616 - MER45A DNA AcHobo 0 178 34 236 345 12 0 chr20 70845894 70845978 -1307904 + MIR SINE MIR 89 173 -89 1116 208 43 0 chr20 70846111 70846390 -1307492 + MER33 DNA MER1_type 29 319 -5 1123 214 0 0 chr20 70846403 70846618 -1307264 - MER58A DNA MER1_type 0 224 10 340 321 28 0 chr20 70846618 70846724 -1307158 + L2 LINE L2 3154 3262 -10 273 359 66 14 chr20 70847729 70847941 -1305941 - MIR SINE MIR -21 241 19 396 0 0 0 chr20 70849074 70849118 -1304764 + (GAAAA)n Simple_repeat Simple_repeat 2 45 0 363 0 0 0 chr20 70849889 70849930 -1303952 - L1PA3 LINE L1 -529 5626 5586 4493 14 0 0 chr20 70849930 70850426 -1303456 + L1PA3 LINE L1 5641 6141 -14 180 0 0 0 chr20 70850429 70850449 -1303433 + (TAAA)n Simple_repeat Simple_repeat 1 20 0 848 230 90 13 chr20 70850706 70851041 -1302841 + L1MC4a LINE L1 5567 5935 -186 602 260 82 46 chr20 70851286 70851363 -1302519 + MER113 DNA MER1_type? 139 212 -309 2656 194 24 2 chr20 70851363 70851867 -1302015 + L1MC1 LINE L1 5814 6328 -5 602 260 82 46 chr20 70851867 70852093 -1301789 + MER113 DNA MER1_type? 212 453 -68 318 132 0 0 chr20 70853219 70853272 -1300610 + (CA)n Simple_repeat Simple_repeat 1 53 0 261 295 62 4 chr20 70853380 70853549 -1300333 - MIR SINE MIR -20 242 6 334 286 177 52 chr20 70853620 70854005 -1299877 - MLT1K LTR MaLR -30 558 126 562 256 83 24 chr20 70854413 70854827 -1299055 + MER113 DNA MER1_type? 1 467 -54 228 362 38 0 chr20 70855529 70855634 -1298248 - MIR SINE MIR -70 192 84 1723 210 61 99 chr20 70856336 70856946 -1296936 + L1MDa LINE L1 1527 2105 -4435 2020 134 0 3 chr20 70856946 70857266 -1296616 - AluJb SINE Alu 0 319 1 1723 210 61 99 chr20 70857266 70857410 -1296472 + L1MDa LINE L1 2105 2253 -4287 183 213 85 0 chr20 70858401 70858448 -1295434 - MIR SINE MIR -15 247 197 202 311 134 25 chr20 70858476 70858595 -1295287 - MIR SINE MIR -123 139 8 351 252 88 100 chr20 70859306 70859556 -1294326 + MIR SINE MIR 16 262 0 300 255 77 86 chr20 70859945 70860075 -1293807 - MIR SINE MIR -59 149 20 2308 89 7 20 chr20 70860151 70860453 -1293429 + AluSg SINE Alu 10 307 -3 228 174 22 0 chr20 70860829 70860875 -1293007 - LTR33A LTR ERVL -3 520 474 207 0 0 0 chr20 70861253 70861276 -1292606 + (CCCA)n Simple_repeat Simple_repeat 3 25 0 439 281 31 0 chr20 70861552 70861680 -1292202 + MIR SINE MIR 13 144 -118 188 219 16 78 chr20 70862356 70862420 -1291462 - L2 LINE L2 0 3313 3254 536 207 9 43 chr20 70864133 70864249 -1289633 - L2 LINE L2 -1 3271 3160 876 265 55 4 chr20 70864350 70864588 -1289294 + MIR SINE MIR 9 258 -4 666 306 152 26 chr20 70864596 70865297 -1288585 - L2 LINE L2 -219 3053 2256 200 239 183 0 chr20 70865377 70865448 -1288434 - L2 LINE L2 -27 3245 3162 308 356 10 0 chr20 70865936 70866037 -1287845 + MIR SINE MIR 48 149 -113 280 287 53 11 chr20 70866638 70866732 -1287150 + L2 LINE L2 3175 3272 0 1824 119 4 0 chr20 70866869 70867112 -1286770 + AluSx SINE Alu 37 280 -32 222 37 0 0 chr20 70867114 70867141 -1286741 + (TAA)n Simple_repeat Simple_repeat 2 28 0 245 331 12 0 chr20 70867971 70868069 -1285813 - MIR SINE MIR -67 141 41 634 277 6 24 chr20 70868133 70868299 -1285583 - MIR SINE MIR -90 172 10 223 319 22 37 chr20 70868787 70868922 -1284960 + MIR SINE MIR 17 149 -113 184 366 99 0 chr20 70869246 70869317 -1284565 - L3b LINE CR1 -33 1550 1473 955 201 101 0 chr20 70870207 70870406 -1283476 + MER20 DNA MER1_type 1 219 0 488 270 172 20 chr20 70871571 70871775 -1282107 - MIR SINE MIR 0 262 28 579 209 235 0 chr20 70872116 70872269 -1281613 + MER5A DNA MER1_type 1 189 0 207 139 0 0 chr20 70872466 70872502 -1281380 + (A)n Simple_repeat Simple_repeat 1 36 0 851 235 122 40 chr20 70872537 70872890 -1280992 + MLT1D LTR MaLR 1 382 -123 273 328 0 0 chr20 70873100 70873164 -1280718 + L2 LINE L2 3209 3272 0 880 195 26 71 chr20 70873404 70873630 -1280252 - MER20 DNA MER1_type 0 219 4 191 304 0 0 chr20 70874195 70874241 -1279641 - L2 LINE L2 -11 3261 3216 378 295 52 74 chr20 70874771 70875066 -1278816 - L1ME3 LINE L1 -217 5945 5661 3223 120 7 79 chr20 70875066 70875626 -1278256 + MER1A DNA MER1_type 4 523 -4 378 295 52 74 chr20 70875626 70875770 -1278112 - L1ME3 LINE L1 -501 5661 5515 311 245 58 75 chr20 70875973 70876161 -1277721 + L1ME LINE L1 3781 3965 -2181 1110 161 0 26 chr20 70876194 70876387 -1277495 - AluJb SINE Alu -5 307 120 821 148 8 0 chr20 70876401 70876529 -1277353 - FLAM_C SINE Alu -5 138 10 1299 322 118 33 chr20 70876553 70877589 -1276293 + L1ME LINE L1 4015 5138 -1008 613 291 71 25 chr20 70877663 70878075 -1275807 + L1ME LINE L1 5242 5678 -443 293 253 112 65 chr20 70878439 70878609 -1275273 + L2 LINE L2 3133 3310 -3 401 233 17 42 chr20 70878684 70878804 -1275078 + MER103 DNA DNA 2 118 -48 290 333 60 8 chr20 70880279 70880396 -1273486 + MIR SINE MIR 112 234 -28 311 247 47 12 chr20 70880654 70880739 -1273143 - MIR SINE MIR -81 127 40 266 235 12 0 chr20 70880829 70880910 -1272972 + (CA)n Simple_repeat Simple_repeat 1 82 0 359 350 14 0 chr20 70880993 70881133 -1272749 + MIR SINE MIR 121 262 0 246 273 94 88 chr20 70882357 70882614 -1271268 + MLT1I LTR MaLR 73 334 -75 2162 108 0 10 chr20 70882614 70882911 -1270971 + AluSx SINE Alu 1 294 -18 246 273 94 88 chr20 70882911 70882961 -1270921 + MLT1I LTR MaLR 334 382 -27 554 250 98 68 chr20 70883144 70883600 -1270282 - L2 LINE L2 -257 3056 2553 222 278 35 81 chr20 70884118 70884291 -1269591 - MER5A DNA MER1_type -7 182 18 1232 254 66 70 chr20 70884426 70885028 -1268854 - MER21B LTR ERV1 -240 623 24 266 306 65 9 chr20 70888782 70888890 -1264992 - MIR SINE MIR -135 127 14 326 312 107 47 chr20 70889171 70889572 -1264310 + LTR16C LTR ERVL 65 489 -2 220 266 0 22 chr20 70889718 70889857 -1264025 + (TATATG)n Simple_repeat Simple_repeat 2 137 0 281 296 0 11 chr20 70889925 70890104 -1263778 + (TATG)n Simple_repeat Simple_repeat 2 178 0 215 295 29 19 chr20 70890104 70890209 -1263673 + (TATATG)n Simple_repeat Simple_repeat 3 108 0 305 299 0 6 chr20 70890209 70890383 -1263499 + (TG)n Simple_repeat Simple_repeat 2 174 0 361 275 147 43 chr20 70891240 70891636 -1262246 + L2 LINE L2 2836 3272 0 473 326 6 6 chr20 70892215 70892387 -1261495 - MIR SINE MIR -53 209 38 199 300 14 14 chr20 70892685 70892755 -1261127 + MIR SINE MIR 9 78 -184 314 214 57 0 chr20 70892900 70892970 -1260912 - MER103 DNA DNA -75 91 18 302 294 54 11 chr20 70894098 70894190 -1259692 - MIR SINE MIR -108 154 59 219 170 0 0 chr20 70894575 70894622 -1259260 + (TG)n Simple_repeat Simple_repeat 2 48 0 257 237 0 0 chr20 70895009 70895068 -1258814 - L1ME4a LINE L1 -3 6118 6060 211 194 0 0 chr20 70895764 70895807 -1258075 + (TGAA)n Simple_repeat Simple_repeat 1 43 0 798 264 31 0 chr20 70896306 70896499 -1257383 - MIR SINE MIR -57 205 7 252 367 67 6 chr20 70897563 70897743 -1256139 + MIR SINE MIR 45 235 -27 189 278 130 17 chr20 70897817 70897932 -1255950 + MIR SINE MIR 106 233 -29 578 222 124 90 chr20 70897965 70898243 -1255639 - MER113 DNA MER1_type? -92 429 133 1899 84 19 4 chr20 70898243 70898505 -1255377 - L1MA2 LINE L1 0 6304 6039 578 222 124 90 chr20 70898505 70898613 -1255269 - MER113 DNA MER1_type? -388 133 30 226 354 12 0 chr20 70899635 70899717 -1254165 + GA-rich Low_complexity Low_complexity 5 87 0 525 270 31 36 chr20 70899727 70899923 -1253959 - MLT1K LTR MaLR 0 588 394 385 276 20 10 chr20 70900167 70900265 -1253617 - MLT1K LTR MaLR -339 249 151 296 318 63 0 chr20 70900364 70900490 -1253392 - MIR SINE MIR -13 249 116 247 316 61 0 chr20 70900756 70900854 -1253028 - L2 LINE L2 -6 3307 3204 2148 116 0 10 chr20 70900997 70901335 -1252547 - AluSx SINE Alu 0 312 6 541 172 0 0 chr20 70901357 70901444 -1252438 + AluJ/FRAM SINE Alu 218 304 -8 1222 190 0 9 chr20 70901706 70901922 -1251960 + MER20 DNA MER1_type 1 214 -5 201 226 0 0 chr20 70902039 70902092 -1251790 + (CAT)n Simple_repeat Simple_repeat 2 54 0 4320 152 34 4 chr20 70903744 70904041 -1249841 - L1MA6 LINE L1 -209 6091 5804 282 95 0 0 chr20 70904041 70904083 -1249799 + (TG)n Simple_repeat Simple_repeat 2 43 0 4320 152 34 4 chr20 70904083 70904540 -1249342 - L1MA6 LINE L1 -496 5804 5314 280 184 0 0 chr20 70904560 70904609 -1249273 + MER2 DNA MER2_type 30 78 -267 251 222 0 0 chr20 70904599 70904644 -1249238 + MER8 DNA MER2_type 135 179 -60 * 363 215 0 0 chr20 70904618 70904683 -1249199 + MER2 DNA MER2_type 281 345 0 751 152 8 0 chr20 70904683 70904815 -1249067 - L1MA6 LINE L1 -838 5308 5176 456 183 49 0 chr20 70904812 70904894 -1248988 + L1 LINE L1 4058 4143 -2003 * 1303 174 81 4 chr20 70905004 70905263 -1248619 - MSTB LTR MaLR 0 426 148 356 233 11 22 chr20 70905317 70905407 -1248475 + L1ME1 LINE L1 4066 4154 -1992 1965 249 47 23 chr20 70905417 70906032 -1247850 + L1ME1 LINE L1 5478 6107 -59 989 231 4 51 chr20 70906030 70906285 -1247597 + L1ME LINE L1 3982 4224 -1922 * 2561 245 101 9 chr20 70906287 70907297 -1246585 + L1ME LINE L1 4362 5471 -695 2383 76 0 10 chr20 70908284 70908598 -1245284 + AluY SINE Alu 1 311 0 245 185 34 118 chr20 70908992 70909111 -1244771 - L1MC5 LINE L1 -72 7889 7781 258 310 83 7 chr20 70909327 70909472 -1244410 + L2 LINE L2 1936 2091 -1223 263 346 11 50 chr20 70909652 70909834 -1244048 + L2 LINE L2 2502 2676 -638 259 217 83 0 chr20 70909875 70909935 -1243947 + L2 LINE L2 3246 3310 -3 434 308 159 17 chr20 70910082 70910452 -1243430 - L2 LINE L2 -111 3202 2784 211 259 86 0 chr20 70910591 70910649 -1243233 + L2 LINE L2 3247 3309 -4 1668 57 14 0 chr20 70910694 70910905 -1242977 - AluY SINE Alu -4 307 94 636 100 0 0 chr20 70911039 70911119 -1242763 - MADE1 DNA Mariner 0 80 1 2073 146 16 48 chr20 70912995 70913371 -1240511 + THE1B LTR MaLR 1 364 0 397 289 104 6 chr20 70913489 70913662 -1240220 - MIR SINE MIR -38 224 35 215 260 40 0 chr20 70913715 70913765 -1240117 - L2 LINE L2 0 3313 3262 22 35 0 0 chr20 70913785 70913814 -1240068 + AT_rich Low_complexity Low_complexity 1 29 0 23 33 0 0 chr20 70914367 70914397 -1239485 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr20 70915008 70915036 -1238846 + AT_rich Low_complexity Low_complexity 1 28 0 2160 98 24 3 chr20 70916034 70916330 -1237552 + AluSx SINE Alu 1 302 -10 1700 154 82 0 chr20 70916977 70917256 -1236626 + AluJb SINE Alu 1 302 -10 316 344 70 14 chr20 70917630 70917845 -1236037 + MARNA DNA Mariner 339 565 -21 307 295 0 0 chr20 70918175 70918236 -1235646 + MER58 DNA MER1_type 1 61 -2359 * 5682 185 45 11 chr20 70918234 70919365 -1234517 + Cheshire DNA MER1_type 1252 2420 0 270 275 144 24 chr20 70920287 70920454 -1233428 - L2 LINE L2 -24 3289 3103 327 353 72 1 chr20 70920852 70921029 -1232853 - MIR SINE MIR -30 232 45 23 0 0 0 chr20 70921977 70922000 -1231882 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr20 70922230 70922260 -1231622 + AT_rich Low_complexity Low_complexity 1 30 0 304 313 144 38 chr20 70922952 70923112 -1230770 - MIR3 SINE MIR -27 181 5 863 226 6 0 chr20 70923871 70924039 -1229843 + FRAM SINE Alu 1 164 -12 313 206 44 111 chr20 70924135 70924272 -1229610 + L1MC4a LINE L1 2427 2572 -3968 3048 126 81 16 chr20 70924272 70924781 -1229101 + MER34 LTR ERV1 1 542 0 313 206 44 111 chr20 70924781 70924805 -1229077 + L1MC4a LINE L1 2572 2596 -3944 916 86 55 0 chr20 70924805 70924933 -1228949 + L1MA1 LINE L1 6168 6302 0 313 206 44 111 chr20 70924933 70925109 -1228773 + L1MC4a LINE L1 2596 2742 -3798 397 293 76 49 chr20 70925132 70925395 -1228487 + L1M4 LINE L1 4803 5072 -1074 1478 98 64 0 chr20 70925483 70925687 -1228195 + L1PA10 LINE L1 5939 6155 -13 1621 181 101 73 chr20 70926545 70926999 -1226883 - MLT1C LTR MaLR 0 467 1 536 283 113 46 chr20 70928625 70929982 -1223900 + L1MC4a LINE L1 4871 6131 -425 1548 221 186 24 chr20 70930630 70931254 -1222628 + Zaphod DNA AcHobo 266 990 -3041 530 186 279 5 chr20 70931252 70931456 -1222426 + Zaphod DNA AcHobo 3595 3854 -177 * 1182 180 98 27 chr20 70931460 70931716 -1222166 + AluJb SINE Alu 11 284 -28 544 246 66 6 chr20 70931718 70931901 -1221981 + Zaphod DNA AcHobo 3838 4031 0 2169 99 7 0 chr20 70932713 70933017 -1220865 + AluSx SINE Alu 1 306 -6 393 286 77 127 chr20 70933292 70934211 -1219671 + L1M2 LINE L1 511 1231 -5618 29 28 0 0 chr20 70935021 70935057 -1218825 + AT_rich Low_complexity Low_complexity 1 36 0 1577 178 7 24 chr20 70935811 70936104 -1217778 + AluJo SINE Alu 7 294 -18 418 295 89 36 chr20 70936191 70936263 -1217619 + MIR SINE MIR 21 88 -174 1624 170 65 30 chr20 70936263 70936599 -1217283 - MER7A DNA MER2_type 0 346 1 418 295 89 36 chr20 70936599 70936750 -1217132 + MIR SINE MIR 88 256 -6 337 281 120 92 chr20 70939996 70940387 -1213495 - L1M2 LINE L1 -5579 1270 869 22 56 0 0 chr20 70940766 70940802 -1213080 + GC_rich Low_complexity Low_complexity 1 36 0 186 318 39 70 chr20 70943004 70943133 -1210749 + MIR SINE MIR 50 174 -88 2448 76 10 0 chr20 70947544 70947848 -1206034 + AluSp SINE Alu 1 307 -6 231 114 0 0 chr20 70948357 70948392 -1205490 + (A)n Simple_repeat Simple_repeat 1 35 0 5387 136 3 5 chr20 70950437 70950723 -1203159 - L1PB3 LINE L1 0 6154 5869 1606 106 5 0 chr20 70950723 70950964 -1202918 + AluSg/x SINE Alu 66 307 0 5387 136 3 5 chr20 70950964 70951214 -1202668 - L1PB3 LINE L1 -285 5869 5620 2379 114 56 11 chr20 70951214 70951573 -1202309 - THE1C LTR MaLR 0 375 1 5387 136 3 5 chr20 70951573 70952205 -1201677 - L1PB3 LINE L1 -534 5620 5020 501 175 0 10 chr20 70952205 70952302 -1201580 + L1PB3 LINE L1 4923 5018 -1128 1355 89 139 0 chr20 70952793 70952995 -1200887 + MER30 DNA MER1_type 1 230 0 2382 107 0 0 chr20 70953728 70954028 -1199854 + AluSx SINE Alu 1 300 -12 419 250 69 69 chr20 70954162 70954242 -1199640 - L1ME LINE L1 -5909 161 82 540 0 0 0 chr20 70954242 70954302 -1199580 + (TA)n Simple_repeat Simple_repeat 1 60 0 * 576 29 0 0 chr20 70954301 70954371 -1199511 + (GA)n Simple_repeat Simple_repeat 2 71 0 419 250 69 69 chr20 70954302 70954371 -1199511 - L1ME LINE L1 -5988 82 78 1801 100 66 8 chr20 70954371 70954630 -1199252 - AluSq SINE Alu -39 274 1 419 250 69 69 chr20 70954630 70954708 -1199174 - L1ME LINE L1 -5991 79 2 1163 104 0 7 chr20 70956019 70956193 -1197689 - AluSp SINE Alu 0 302 130 220 137 0 59 chr20 70956672 70956723 -1197159 + (TTTTTA)n Simple_repeat Simple_repeat 2 49 0 2492 131 0 8 chr20 70956726 70957093 -1196789 - L1PB1 LINE L1 -3 6148 5785 289 244 0 0 chr20 70957105 70957195 -1196687 + L1MC4 LINE L1 6614 6703 -1339 303 244 47 0 chr20 70957215 70957301 -1196581 - L1MC4 LINE L1 -1339 6703 6614 263 170 38 0 chr20 70957309 70957362 -1196520 - L1MC4 LINE L1 -1339 6703 6649 3810 114 12 1 chr20 70957375 70958093 -1195789 - L1P5 LINE L1 -365 5786 5063 201 132 0 0 chr20 70959075 70959113 -1194769 + (CTG)n Simple_repeat Simple_repeat 3 40 0 1850 183 3 0 chr20 70959408 70959719 -1194163 - AluJb SINE Alu 0 312 1 1876 132 28 0 chr20 70959730 70960019 -1193863 - AluSx SINE Alu -15 297 1 356 322 26 9 chr20 70960431 70960546 -1193336 - MER5B DNA MER1_type -5 173 57 221 336 26 0 chr20 70960559 70960672 -1193210 + MIR SINE MIR 102 217 -45 2452 176 11 20 chr20 70960672 70960714 -1193168 + MER65A LTR ERV1 1 42 -403 243 0 0 0 chr20 70960714 70960741 -1193141 + (CA)n Simple_repeat Simple_repeat 2 28 0 2452 176 11 20 chr20 70960741 70961147 -1192735 + MER65A LTR ERV1 42 445 0 231 282 141 12 chr20 70961212 70961297 -1192585 - L2 LINE L2 -6 3307 3212 204 308 243 22 chr20 70962374 70962556 -1191326 - L2 LINE L2 -428 2886 2745 1786 200 63 46 chr20 70962556 70963015 -1190867 - MLT1C LTR MaLR 0 467 1 204 308 243 22 chr20 70963015 70963326 -1190556 - L2 LINE L2 -569 2745 2284 279 231 132 0 chr20 70963369 70963460 -1190422 + MIR SINE MIR 111 213 -49 245 271 14 0 chr20 70963496 70963566 -1190316 - MIR SINE MIR -126 136 66 1341 159 10 0 chr20 70963572 70963780 -1190102 - AluJb SINE Alu -12 300 91 826 212 43 5 chr20 70963855 70964039 -1189843 - MER3 DNA MER1_type -18 191 1 387 250 5 0 chr20 70965118 70965223 -1188659 - MIR3 SINE MIR -5 203 97 4393 214 43 30 chr20 70965662 70966772 -1187110 - Charlie1a DNA MER1_type -66 1389 265 971 153 106 124 chr20 70966804 70967086 -1186796 - Charlie1a DNA MER1_type -1178 277 1 593 225 20 25 chr20 70967086 70967250 -1186632 + L1ME3 LINE L1 5673 5829 -333 265 264 82 18 chr20 70967833 70967943 -1185939 - L1MC4 LINE L1 0 8042 7926 1212 59 0 32 chr20 70968033 70968145 -1185737 + (TTTC)n Simple_repeat Simple_repeat 1 288 0 1212 59 0 32 chr20 70968145 70968331 -1185551 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 2103 136 3 0 chr20 70968407 70968716 -1185166 - AluSx SINE Alu -2 310 1 21 36 0 0 chr20 70968845 70968873 -1185009 + AT_rich Low_complexity Low_complexity 1 28 0 25 0 0 0 chr20 70969260 70969285 -1184597 + AT_rich Low_complexity Low_complexity 1 25 0 699 209 83 117 chr20 70969658 70970078 -1183804 + MER113 DNA MER1_type? 18 423 -98 415 252 0 28 chr20 70970613 70970720 -1183162 + MIR3 SINE MIR 7 110 -98 373 224 78 104 chr20 70970766 70970848 -1183034 + Charlie8 DNA MER1_type 34 117 -224 2281 75 7 0 chr20 70970848 70971175 -1182707 + AluY SINE Alu 1 329 0 373 224 78 104 chr20 70971175 70971283 -1182599 + Charlie8 DNA MER1_type 117 220 -121 423 309 96 26 chr20 70971558 70971788 -1182094 + MIR SINE MIR 13 258 -4 336 261 102 61 chr20 70971918 70972177 -1181705 - L1MC4a LINE L1 -294 5827 5621 473 208 162 26 chr20 70973443 70973597 -1180285 - MER5A DNA MER1_type -6 183 9 6460 90 25 1 chr20 70973717 70974605 -1179277 - L1PA13 LINE L1 0 6163 5255 387 142 0 0 chr20 70974617 70974693 -1179189 + L1PA13 LINE L1 5173 5248 -898 322 241 25 155 chr20 70975093 70975371 -1178511 + L2 LINE L2 3072 3313 0 2062 205 52 9 chr20 70975417 70975861 -1178021 + MLT1C LTR MaLR 1 463 -4 182 329 89 0 chr20 70977331 70977410 -1176472 + MIR SINE MIR 32 117 -145 42 77 0 0 chr20 70977790 70977881 -1176001 + AT_rich Low_complexity Low_complexity 1 91 0 3969 155 80 32 chr20 70977904 70978689 -1175193 - L1MC2 LINE L1 -8 6336 5514 2161 110 7 0 chr20 70978698 70978990 -1174892 - AluSx SINE Alu -15 297 4 22 56 0 0 chr20 70979229 70979265 -1174617 + AT_rich Low_complexity Low_complexity 1 36 0 3175 239 68 43 chr20 70979326 70979507 -1174375 - L1ME1 LINE L1 -167 5999 5824 2082 136 3 3 chr20 70979507 70979816 -1174066 - AluSc SINE Alu 0 309 1 3175 239 68 43 chr20 70979816 70979933 -1173949 - L1ME1 LINE L1 -342 5824 5711 2315 121 0 0 chr20 70979933 70980246 -1173636 - AluSq SINE Alu 0 313 1 3175 239 68 43 chr20 70980246 70980612 -1173270 - L1ME1 LINE L1 -455 5711 5355 2218 112 0 10 chr20 70980612 70980917 -1172965 - AluSq SINE Alu -11 302 1 3175 239 68 43 chr20 70980917 70981896 -1171986 - L1ME1 LINE L1 -811 5355 4272 2520 221 36 42 chr20 70981887 70982702 -1171180 - L1ME1 LINE L1 -2299 3847 3038 * 461 229 61 15 chr20 70983037 70983168 -1170714 - L2 LINE L2 -17 3255 3119 242 299 8 24 chr20 70983992 70984119 -1169763 + (TA)n Simple_repeat Simple_repeat 2 126 0 396 277 73 24 chr20 70984192 70984398 -1169484 - L1ME4a LINE L1 -283 5838 5623 21 0 0 0 chr20 70985134 70985155 -1168727 + AT_rich Low_complexity Low_complexity 1 21 0 2278 143 13 81 chr20 70985530 70985985 -1167897 - MSTB LTR MaLR -1 425 2 188 301 154 8 chr20 70986090 70986213 -1167669 - MIR SINE MIR -11 251 111 994 211 44 0 chr20 70986243 70986447 -1167435 - MER20 DNA MER1_type 0 219 7 21 82 0 0 chr20 70986736 70986785 -1167097 + AT_rich Low_complexity Low_complexity 1 49 0 396 0 0 0 chr20 70986936 70986980 -1166902 + (CA)n Simple_repeat Simple_repeat 2 45 0 180 273 273 11 chr20 70986989 70987077 -1166805 + L2 LINE L2 3201 3311 -2 191 204 19 0 chr20 70987657 70987711 -1166171 + CT-rich Low_complexity Low_complexity 2 56 0 321 131 72 189 chr20 70988289 70988442 -1165440 + ORSL DNA AcHobo 138 272 -3 413 316 20 13 chr20 70988444 70988596 -1165286 - MIR SINE MIR -97 165 13 246 261 65 33 chr20 70988670 70988762 -1165120 - MER5A DNA MER1_type -85 104 10 2934 16 0 0 chr20 70989566 70989883 -1163999 + AluYb8 SINE Alu 1 317 -1 2201 131 63 14 chr20 70990169 70990596 -1163286 - L1MB3 LINE L1 0 6183 5736 309 264 45 0 chr20 70990828 70990938 -1162944 - MER5C DNA MER1_type 0 324 210 657 201 42 58 chr20 70991098 70991177 -1162705 - MER5A DNA MER1_type -1 188 109 1619 136 0 0 chr20 70991177 70991413 -1162469 - AluSg/x SINE Alu 0 310 75 657 201 42 58 chr20 70991413 70991522 -1162360 - MER5A DNA MER1_type -80 109 3 2670 153 18 2 chr20 70993590 70994028 -1159854 - L1PB3 LINE L1 0 6154 5710 858 247 41 4 chr20 70994039 70994319 -1159563 - L1MD2 LINE L1 -1 6358 5947 501 252 114 19 chr20 70994844 70995054 -1158828 - MLT1K LTR MaLR -27 561 332 507 229 112 66 chr20 70995088 70995346 -1158536 - MLT1K LTR MaLR -317 271 2 1330 249 94 35 chr20 70995436 70996002 -1157880 + MER77 LTR ERV1 24 673 -8 220 314 12 12 chr20 70996748 70996834 -1157048 - L2 LINE L2 0 3272 3187 1053 195 49 0 chr20 70997267 70997472 -1156410 + MER20 DNA MER1_type 1 215 -4 770 248 149 40 chr20 71000252 71000680 -1153202 + MER113 DNA MER1_type? 44 518 -3 202 299 197 8 chr20 71000711 71000838 -1153044 + MER91A DNA MER1_type 45 195 -1 223 246 9 118 chr20 71000903 71001013 -1152869 - MIR SINE MIR -48 214 117 455 246 109 38 chr20 71002186 71002369 -1151513 - L1MD3 LINE L1 -11 7984 7789 743 256 23 0 chr20 71002657 71002829 -1151053 + MER45A DNA AcHobo 3 178 0 199 250 19 0 chr20 71003476 71003528 -1150354 - MIR3 SINE MIR -3 205 153 30 77 0 0 chr20 71003998 71004063 -1149819 + AT_rich Low_complexity Low_complexity 1 65 0 461 192 17 33 chr20 71004541 71004567 -1149315 + (TATATG)n Simple_repeat Simple_repeat 3 28 -92 1984 145 38 26 chr20 71004567 71004803 -1149079 - MER7A DNA MER2_type -2692 346 105 2561 70 0 3 chr20 71004803 71005115 -1148767 + AluY SINE Alu 1 311 0 1984 145 38 26 chr20 71005115 71005222 -1148660 - MER7A DNA MER2_type -2933 105 1 461 192 17 33 chr20 71005222 71005258 -1148624 + (TATATG)n Simple_repeat Simple_repeat 28 63 -57 2517 141 57 24 chr20 71005258 71005678 -1148204 + Tigger2a DNA MER2_type 1 434 0 461 192 17 33 chr20 71005678 71005734 -1148148 + (TATATG)n Simple_repeat Simple_repeat 63 120 0 501 175 0 0 chr20 71005743 71005846 -1148036 + (TATG)n Simple_repeat Simple_repeat 3 105 0 203 331 99 16 chr20 71005946 71006067 -1147815 + L2 LINE L2 2672 2802 -512 1617 204 19 37 chr20 71007206 71007583 -1146299 - MLT1A2 LTR MaLR -4 370 1 1041 168 113 110 chr20 71007644 71007953 -1145929 - MER66A LTR ERV1 0 478 169 370 171 8 124 chr20 71007928 71008057 -1145825 - MER41A LTR ERV1 -251 303 190 * 589 314 23 9 chr20 71008553 71008773 -1145109 - MIR SINE MIR -21 241 19 182 326 11 34 chr20 71008767 71008856 -1145026 - MER5B DNA MER1_type -33 145 59 * 189 204 91 0 chr20 71009589 71009633 -1144249 + MIR SINE MIR 106 153 -55 216 67 0 0 chr20 71010810 71010840 -1143042 + (TCCCC)n Simple_repeat Simple_repeat 5 34 0 368 185 158 8 chr20 71011290 71011409 -1142473 - MLT1J2 LTR MaLR -337 113 1 801 261 62 0 chr20 71011828 71012039 -1141843 - MER58A DNA MER1_type 0 224 1 24 0 0 0 chr20 71013966 71013990 -1139892 + AT_rich Low_complexity Low_complexity 1 24 0 15277 199 53 21 chr20 71014487 71015312 -1138570 - L1MA5A LINE L1 -9 6930 6133 2024 137 0 10 chr20 71015312 71015605 -1138277 - AluSx SINE Alu -22 290 1 15277 199 53 21 chr20 71015605 71021505 -1132377 - L1MA5A LINE L1 -806 6133 2 1034 233 5 5 chr20 71021582 71021784 -1132098 + MER58A DNA MER1_type 22 223 -1 441 0 0 0 chr20 71022169 71022218 -1131664 + (CA)n Simple_repeat Simple_repeat 2 50 0 180 0 0 0 chr20 71022217 71022237 -1131645 + (TA)n Simple_repeat Simple_repeat 2 21 0 * 1408 241 108 15 chr20 71023189 71023653 -1130229 + MLT1J LTR MaLR 5 511 0 276 30 0 0 chr20 71024275 71024308 -1129574 + (GA)n Simple_repeat Simple_repeat 2 34 0 873 232 120 59 chr20 71025040 71025514 -1128368 + MLT1J LTR MaLR 1 503 -8 488 259 15 58 chr20 71025698 71025903 -1127979 - MARNA DNA Mariner -140 446 251 260 280 28 9 chr20 71026551 71026658 -1127224 + MLT2C1 LTR ERVL 57 165 -232 * 1492 245 26 68 chr20 71026577 71026710 -1127172 + MLT1E2 LTR MaLR 81 218 -408 348 24 0 0 chr20 71026710 71026751 -1127131 + (GA)n Simple_repeat Simple_repeat 2 42 0 1492 245 26 68 chr20 71026751 71027160 -1126722 + MLT1E2 LTR MaLR 218 600 -26 295 296 0 0 chr20 71027213 71027284 -1126598 + L2 LINE L2 3243 3313 0 385 202 45 0 chr20 71027625 71027714 -1126168 - L1MC4 LINE L1 -26 8016 7924 197 220 0 17 chr20 71027738 71027797 -1126085 + CT-rich Low_complexity Low_complexity 2 59 0 236 191 0 0 chr20 71027817 71027864 -1126018 - L1MC4 LINE L1 -157 7885 7839 412 230 80 0 chr20 71027890 71028003 -1125879 - L1ME2 LINE L1 -2 6162 6041 536 271 65 0 chr20 71028003 71028158 -1125724 + MER3 DNA MER1_type 5 122 -87 1344 271 41 24 chr20 71028180 71028673 -1125209 - L1MD2 LINE L1 -2 6357 5856 273 198 267 10 chr20 71028673 71028774 -1125108 + L2 LINE L2 3136 3262 -10 2715 234 10 0 chr20 71029010 71029600 -1124282 + L1MB1 LINE L1 5502 6097 -92 426 119 16 127 chr20 71029743 71029800 -1124082 + L1MB1 LINE L1 6073 6135 -54 3110 65 3 0 chr20 71029800 71030185 -1123697 - L1PA8 LINE L1 -13 6159 5774 426 119 16 127 chr20 71030185 71030234 -1123648 + L1MB1 LINE L1 6135 6166 -23 300 53 0 0 chr20 71030234 71030272 -1123610 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 426 119 16 127 chr20 71030272 71030290 -1123592 + L1MB1 LINE L1 6166 6184 -5 266 137 200 63 chr20 71030402 71030497 -1123385 - L1MA10 LINE L1 -12 6322 6215 229 67 22 22 chr20 71030695 71030740 -1123142 + (TTTTG)n Simple_repeat Simple_repeat 2 46 0 531 277 135 49 chr20 71030855 71031202 -1122680 + MLT1K LTR MaLR 165 541 -47 1971 69 0 4 chr20 71031253 71031499 -1122383 - MER41A LTR ERV1 -87 467 223 292 225 62 70 chr20 71032469 71032598 -1121284 - MLT1J2 LTR MaLR 0 450 323 247 261 15 15 chr20 71032634 71032699 -1121183 - MLT1J LTR MaLR -339 172 108 4410 16 0 0 chr20 71032835 71033331 -1120551 + L1PA2 LINE L1 5660 6155 0 325 336 30 8 chr20 71033433 71033567 -1120315 + MIR SINE MIR 46 182 -80 312 322 142 22 chr20 71033711 71033894 -1119988 - MIR SINE MIR -10 252 48 288 0 0 0 chr20 71034093 71034125 -1119757 + (TG)n Simple_repeat Simple_repeat 1 32 0 725 301 138 43 chr20 71035381 71035945 -1117937 - L1MC4a LINE L1 -1918 5890 5268 1959 140 64 17 chr20 71035945 71036303 -1117579 + THE1C LTR MaLR 1 375 0 725 301 138 43 chr20 71036303 71036320 -1117562 - L1MC4a LINE L1 -2540 5268 5254 252 0 0 0 chr20 71036394 71036422 -1117460 + (A)n Simple_repeat Simple_repeat 1 28 0 211 296 82 66 chr20 71038857 71039053 -1114829 + L2 LINE L2 3063 3261 -11 289 301 29 22 chr20 71039118 71039254 -1114628 + MER5A DNA MER1_type 2 138 -51 * 454 202 39 19 chr20 71039152 71039256 -1114626 - MER5A DNA MER1_type -23 166 61 2235 93 6 6 chr20 71039273 71039584 -1114298 - AluSx SINE Alu -1 311 1 223 254 16 32 chr20 71039586 71039649 -1114233 + MER5A DNA MER1_type 128 189 0 326 297 93 17 chr20 71039865 71039983 -1113899 - L2 LINE L2 0 3272 3146 607 221 77 0 chr20 71040410 71040581 -1113301 + MER5A DNA MER1_type 4 189 0 433 231 201 42 chr20 71040766 71041244 -1112638 - MLT2F LTR ERVL -55 608 11 329 288 50 14 chr20 71041333 71041472 -1112410 - Charlie8 DNA MER1_type -2213 204 61 5823 126 24 17 chr20 71041498 71042460 -1111422 - LTR5 LTR ERVK 0 969 1 361 314 0 9 chr20 71042492 71042597 -1111285 - MIR3 SINE MIR -53 155 52 260 309 203 8 chr20 71042757 71042880 -1111002 - MER5A DNA MER1_type -1 188 42 622 226 25 19 chr20 71042944 71043103 -1110779 + MER5B DNA MER1_type 19 178 0 909 237 106 3 chr20 71043224 71043507 -1110375 + MER33 DNA MER1_type 3 314 -10 909 165 73 12 chr20 71043611 71043775 -1110107 + MER5A DNA MER1_type 16 189 0 6055 149 16 22 chr20 71043961 71045081 -1108801 - L1 LINE L1 -964 5182 4070 214 309 202 11 chr20 71145427 71145605 -1008277 - MIR SINE MIR -17 245 34 343 293 50 14 chr20 71147110 71147250 -1006632 - L2 LINE L2 -11 3302 3158 241 314 7 7 chr20 71147404 71147541 -1006341 + (TG)n Simple_repeat Simple_repeat 1 137 0 2488 283 57 2 chr20 71148576 71149787 -1004095 - L1MCa LINE L1 -3056 3885 2640 409 263 116 62 chr20 71149830 71150154 -1003728 - L1MCa LINE L1 -5785 715 51 198 421 6 0 chr20 71150803 71150962 -1002920 + L2 LINE L2 2374 2533 -781 272 267 0 86 chr20 71151195 71151300 -1002582 + L2 LINE L2 3217 3312 -1 346 238 219 44 chr20 71151383 71151543 -1002339 - MIR SINE MIR -7 255 68 25 31 0 0 chr20 71152112 71152144 -1001738 + AT_rich Low_complexity Low_complexity 1 32 0 426 143 41 0 chr20 71152395 71152493 -1001389 + L1MA8 LINE L1 6189 6290 -1 1640 267 77 12 chr20 71152550 71153151 -1000731 + L1ME1 LINE L1 5535 6332 -2 341 242 146 34 chr20 71153244 71153422 -1000460 - L1ME LINE L1 -362 5759 5562 230 193 35 35 chr20 71153474 71153531 -1000351 - L1ME LINE L1 -573 5548 5492 192 284 52 52 chr20 71154862 71154978 -998904 - L2 LINE L2 -77 3236 3121 735 230 0 24 chr20 71155279 71155444 -998438 - MER63 DNA MER1_type -275 787 1 501 129 32 0 chr20 71156128 71156221 -997661 + LTR10E LTR ERV1 1 96 -537 2812 151 9 17 chr20 71156247 71156712 -997170 + LTR10E LTR ERV1 173 633 0 882 248 40 25 chr20 71156714 71156992 -996890 + LTR10E-int LTR ERV1 8 289 -6360 1534 146 65 0 chr20 71157122 71157565 -996317 + AluSx SINE Alu 5 464 0 234 91 0 0 chr20 71157565 71157598 -996284 + (GGAA)n Simple_repeat Simple_repeat 1 33 0 350 98 49 33 chr20 71157836 71157897 -995985 + L1MCa LINE L1 2002 2063 -4363 261 182 0 0 chr20 71157903 71157958 -995924 + LTR10E-int LTR ERV1 1111 1165 -5433 320 143 0 12 chr20 71158062 71158146 -995736 + HERVI LTR ERV1 840 922 -5974 309 172 133 56 chr20 71158500 71158680 -995202 + HERVKC4 LTR ERVK 2610 2803 -2459 * 3545 105 35 19 chr20 71158568 71159215 -994667 + HERVI LTR ERV1 1902 2559 -4337 250 324 39 0 chr20 71159222 71159324 -994558 + HERVI LTR ERV1 4741 4846 -2939 2449 191 49 11 chr20 71159746 71160276 -993606 + HERVI LTR ERV1 2543 3092 -3804 3385 288 27 26 chr20 71160529 71161692 -992190 + HERVI LTR ERV1 5338 7501 -169 2668 181 27 22 chr20 71161759 71162345 -991537 + LTR10E LTR ERV1 1 633 0 2159 122 0 0 chr20 71164983 71165287 -988595 + AluSq SINE Alu 7 310 -3 208 200 0 22 chr20 71166144 71166189 -987693 + (TAA)n Simple_repeat Simple_repeat 1 44 0 367 289 21 68 chr20 71167439 71167629 -986253 - Charlie8 DNA MER1_type -2201 216 36 2126 104 7 3 chr20 71169442 71169750 -984132 - AluSc SINE Alu 0 309 1 337 290 61 33 chr20 71170285 71170499 -983383 + L1MC4a LINE L1 5667 5886 -1922 428 329 0 0 chr20 71170567 71170704 -983178 + (TG)n Simple_repeat Simple_repeat 1 137 0 202 360 59 0 chr20 71171184 71171320 -982562 - MIR SINE MIR 0 262 119 190 308 116 27 chr20 71171455 71171601 -982281 + MIR SINE MIR 30 188 -74 303 270 58 85 chr20 71172757 71172875 -981007 - L1MC4a LINE L1 -1897 5911 5791 707 233 79 15 chr20 71172875 71173077 -980805 + MER58C DNA MER1_type 1 215 0 303 270 58 85 chr20 71173077 71173133 -980749 - L1MC4a LINE L1 -2017 5791 5740 1364 249 33 25 chr20 71173133 71173495 -980387 + MLT1A1 LTR MaLR 1 365 0 303 270 58 85 chr20 71173495 71173508 -980374 - L1MC4a LINE L1 -2068 5740 5728 1863 167 14 22 chr20 71173522 71173881 -980001 - L1MB4 LINE L1 -12 6168 5813 754 173 12 6 chr20 71173881 71174043 -979839 + CT-rich Low_complexity Low_complexity 1 163 0 1786 146 51 0 chr20 71174043 71174338 -979544 - AluSx SINE Alu -2 310 1 1032 218 9 4 chr20 71174338 71174563 -979319 - L1MB4 LINE L1 -350 5830 5605 258 327 20 26 chr20 71174541 71174694 -979188 - L1MC4a LINE L1 -2065 5743 5592 * 300 163 0 0 chr20 71175552 71175601 -978281 + L1M3 LINE L1 5764 5812 -359 297 342 72 20 chr20 71176773 71176925 -976957 - L2 LINE L2 -1 3312 3153 216 127 13 89 chr20 71177167 71177324 -976558 + (ATGGTG)n Simple_repeat Simple_repeat 2 146 0 216 114 152 9 chr20 71177327 71177432 -976450 + (TGGA)n Simple_repeat Simple_repeat 1 120 0 296 86 25 86 chr20 71177432 71177594 -976288 + (ATGGTG)n Simple_repeat Simple_repeat 1 152 0 613 156 9 0 chr20 71177663 71177772 -976110 + L1MB3 LINE L1 6063 6172 -11 844 233 98 36 chr20 71177934 71178284 -975598 + MLT1D LTR MaLR 32 417 -50 27 0 0 0 chr20 71178284 71178311 -975571 + AT_rich Low_complexity Low_complexity 1 27 0 353 287 17 0 chr20 71179500 71179615 -974267 - LTR43 LTR ERV1 -306 296 180 847 184 10 98 chr20 71181177 71181286 -972596 + MLT2B1 LTR ERVL 1 118 -296 215 0 67 0 chr20 71181286 71181316 -972566 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 1311 163 98 8 chr20 71181319 71181583 -972299 - AluSx SINE Alu -24 288 1 847 184 10 98 chr20 71181583 71181724 -972158 + MLT2B1 LTR ERVL 120 234 -180 287 288 0 0 chr20 71181946 71182026 -971856 + LTR58 LTR ERV1 350 429 -250 883 190 107 42 chr20 71182293 71182509 -971373 + MLT2D LTR ERVL 242 414 0 2024 130 7 0 chr20 71184780 71185072 -968810 + AluSx SINE Alu 1 294 -18 453 254 67 36 chr20 71185339 71185532 -968350 - MIR SINE MIR -21 241 43 578 251 114 29 chr20 71186006 71186181 -967701 - MER20 DNA MER1_type -21 198 9 212 316 0 0 chr20 71188789 71188846 -965036 + (CA)n Simple_repeat Simple_repeat 2 58 0 2279 104 0 0 chr20 71189212 71189499 -964383 - AluSx SINE Alu -6 306 20 2521 90 0 3 chr20 71191241 71191551 -962331 + AluSq SINE Alu 1 309 -4 496 216 8 8 chr20 71192470 71192595 -961287 + L1ME4a LINE L1 5628 5752 -369 2042 141 42 33 chr20 71192800 71193161 -960721 - THE1B LTR MaLR 0 364 1 310 264 8 64 chr20 71193460 71193523 -960359 + LTR67 LTR ERVL 432 497 -60 1550 211 143 33 chr20 71193523 71193589 -960293 - MLT1D LTR MaLR 0 505 448 2065 122 7 11 chr20 71193589 71193875 -960007 + AluSx SINE Alu 1 285 -27 936 41 0 0 chr20 71193875 71193996 -959886 + (CA)n Simple_repeat Simple_repeat 2 122 0 1550 211 143 33 chr20 71193996 71194383 -959499 - MLT1D LTR MaLR -56 449 1 310 264 8 64 chr20 71194383 71194444 -959438 + LTR67 LTR ERVL 497 549 -8 339 253 78 71 chr20 71194533 71194589 -959293 + L1ME4a LINE L1 5951 6005 -116 2175 90 14 4 chr20 71194589 71194949 -958933 - AluSc SINE Alu 0 363 1 339 253 78 71 chr20 71194949 71195045 -958837 + L1ME4a LINE L1 6005 6105 -16 227 313 83 49 chr20 71195366 71195510 -958372 + MER5A DNA MER1_type 19 167 -22 2502 59 0 10 chr20 71196796 71197100 -956782 - AluY SINE Alu -10 301 1 887 244 60 5 chr20 71197489 71197706 -956176 + MLT1D LTR MaLR 269 497 -8 775 207 46 148 chr20 71197939 71198378 -955504 + MLT1A1 LTR MaLR 3 365 0 6445 209 77 34 chr20 71198383 71200023 -953859 + MLT1A1-int LTR MaLR 25 1735 0 1263 191 22 119 chr20 71200025 71200427 -953455 + MLT1A1 LTR MaLR 3 365 0 2082 113 3 3 chr20 71201656 71201940 -951942 + AluSx SINE Alu 2 285 -27 282 56 0 0 chr20 71201940 71201976 -951906 + (TA)n Simple_repeat Simple_repeat 2 37 0 274 200 53 13 chr20 71202160 71202235 -951647 + MIR SINE MIR 91 168 -94 438 313 86 39 chr20 71202255 71202488 -951394 + MIR SINE MIR 18 261 -1 234 336 7 71 chr20 71202596 71202736 -951146 + L2 LINE L2 2657 2787 -527 271 298 21 11 chr20 71203125 71203219 -950663 + L2 LINE L2 3173 3267 -5 1667 46 0 0 chr20 71203424 71203621 -950261 + L1PA5 LINE L1 5940 6136 -18 417 86 0 0 chr20 71203622 71203680 -950202 + (TA)n Simple_repeat Simple_repeat 1 58 0 1694 181 3 3 chr20 71203759 71204041 -949841 + AluJo SINE Alu 1 282 -30 207 69 0 0 chr20 71204044 71204073 -949809 + (TAAA)n Simple_repeat Simple_repeat 4 32 0 316 232 0 49 chr20 71204953 71205035 -948847 - L2 LINE L2 0 3272 3195 1374 185 15 19 chr20 71205044 71205304 -948578 - AluJo SINE Alu -17 295 37 745 224 93 0 chr20 71205401 71205606 -948276 - MLT1A2 LTR MaLR 0 374 151 5828 145 16 54 chr20 71205699 71207759 -946123 + L1MA4 LINE L1 4282 6289 -11 728 185 73 11 chr20 71209113 71209198 -944684 - MER53 DNA DNA 0 189 111 2567 82 0 0 chr20 71209198 71209504 -944378 - AluSq SINE Alu -7 306 1 728 185 73 11 chr20 71209504 71209596 -944286 - MER53 DNA DNA -78 111 1 313 317 62 26 chr20 71209716 71209943 -943939 + L1ME LINE L1 5424 5658 -463 313 302 171 44 chr20 71209978 71210365 -943517 + L2 LINE L2 2878 3313 0 503 56 14 0 chr20 71212426 71212497 -941385 + (GA)n Simple_repeat Simple_repeat 1 72 0 184 314 43 0 chr20 71215639 71215709 -938173 - MIR SINE MIR -114 148 76 352 235 78 97 chr20 71217996 71218086 -935796 - L2 LINE L2 -57 3256 3166 2673 85 18 15 chr20 71218086 71218476 -935406 + L1PB2 LINE L1 5761 6151 0 352 235 78 97 chr20 71218476 71218602 -935280 - L2 LINE L2 -147 3166 3044 864 199 0 0 chr20 71218607 71218763 -935119 + FRAM SINE Alu 1 154 -22 227 306 134 32 chr20 71219059 71219245 -934637 + L2 LINE L2 3014 3218 -95 668 242 101 5 chr20 71222150 71222260 -931622 + L1MA9 LINE L1 6035 6133 -179 402 21 0 0 chr20 71222260 71222307 -931575 + (CA)n Simple_repeat Simple_repeat 2 48 0 668 242 101 5 chr20 71222307 71222415 -931467 + L1MA9 LINE L1 6133 6274 -38 928 248 76 42 chr20 71222443 71222508 -931374 - MLT1C LTR MaLR 0 467 406 2394 78 0 0 chr20 71222508 71222840 -931042 + AluY SINE Alu 1 332 0 928 248 76 42 chr20 71222840 71223220 -930662 - MLT1C LTR MaLR -61 406 6 252 77 0 0 chr20 71224360 71224399 -929483 + (TTAA)n Simple_repeat Simple_repeat 4 42 0 848 128 0 16 chr20 71224399 71224524 -929358 - AluSq/x SINE Alu -190 123 1 331 340 0 20 chr20 71226150 71226250 -927632 + MIR SINE MIR 49 146 -62 1990 195 53 14 chr20 71226293 71226728 -927154 + MLT1C LTR MaLR 1 452 -15 1842 191 134 2 chr20 71228280 71228721 -925161 + MLT1D LTR MaLR 1 499 -6 424 311 78 16 chr20 71228941 71229134 -924748 + L2 LINE L2 3107 3311 -2 1801 135 29 29 chr20 71229854 71230203 -923679 - THE1C LTR MaLR -26 349 1 701 168 46 17 chr20 71230339 71230512 -923370 - L1MA7 LINE L1 -1 6290 6113 5738 163 14 8 chr20 71230520 71231558 -922324 - L1MC1 LINE L1 -17 6316 5273 220 329 171 14 chr20 71231915 71232125 -921757 - MIR SINE MIR -14 248 6 1518 232 14 41 chr20 71232377 71232813 -921069 - MER63B DNA MER1_type -4 432 9 2138 157 63 30 chr20 71233022 71233539 -920343 - MLT2A2 LTR ERVL 0 554 1 228 277 131 46 chr20 71233728 71233858 -920024 - MIR SINE MIR -78 184 44 1342 109 0 0 chr20 71234280 71234455 -919427 - AluSq SINE Alu -1 312 138 374 370 19 0 chr20 71234499 71234661 -919221 + MIR SINE MIR 95 259 -3 374 201 239 13 chr20 71235237 71235396 -918486 - L2 LINE L2 -3 3310 3116 319 254 61 26 chr20 71235433 71235547 -918335 + MIR SINE MIR 68 185 -77 323 306 101 22 chr20 71237595 71237961 -915921 - L1ME4a LINE L1 -2 6119 5725 3830 187 32 59 chr20 71238007 71238893 -914989 - MER21B LTR ERV1 -1 862 1 694 245 48 67 chr20 71241848 71242056 -911826 - MER63A DNA MER1_type -3 207 4 265 311 83 50 chr20 71242114 71242294 -911588 - MIR SINE MIR -38 224 39 760 256 68 0 chr20 71242560 71242767 -911115 - MER58A DNA MER1_type 0 224 4 2192 133 3 0 chr20 71242977 71243285 -910597 - AluSx SINE Alu -3 309 1 256 224 0 0 chr20 71243303 71243352 -910530 - L2 LINE L2 -3 3310 3262 1088 251 48 43 chr20 71245057 71245472 -908410 + LTR16C LTR ERVL 71 487 -4 208 333 8 49 chr20 71245513 71245636 -908246 + L2 LINE L2 3186 3303 -10 430 261 36 12 chr20 71247097 71247262 -906620 - MER69 DNA AcHobo -333 2193 2025 376 332 83 19 chr20 71247268 71247473 -906409 - MER69 DNA AcHobo -654 572 355 664 283 11 0 chr20 71247495 71247679 -906203 - MER69 DNA AcHobo -1037 189 4 482 214 27 134 chr20 71247941 71248165 -905717 + L1MB8 LINE L1 5978 6177 -1 193 211 58 89 chr20 71251122 71251215 -902667 + MIR SINE MIR 29 121 -87 280 330 0 28 chr20 71251540 71251649 -902233 + MIR SINE MIR 21 126 -136 270 244 26 13 chr20 71251651 71251729 -902153 - L2 LINE L2 -6 3307 3229 461 236 126 0 chr20 71252169 71252296 -901586 + MER5A DNA MER1_type 39 181 -8 807 148 39 45 chr20 71252358 71252514 -901368 + MSTB LTR MaLR 267 414 -12 1044 180 82 20 chr20 71252518 71252773 -901109 + L1MA9 LINE L1 6037 6307 -5 218 152 0 22 chr20 71253024 71253070 -900812 + CT-rich Low_complexity Low_complexity 4 48 0 1144 77 18 0 chr20 71253085 71253253 -900629 + (TTTC)n Simple_repeat Simple_repeat 1 171 0 2411 160 49 2 chr20 71253339 71253746 -900136 + MSTB LTR MaLR 1 426 0 210 71 0 0 chr20 71254112 71254140 -899742 + (A)n Simple_repeat Simple_repeat 1 28 0 413 234 66 0 chr20 71254413 71254550 -899332 - L1ME LINE L1 -3824 2391 2246 2498 113 6 0 chr20 71254585 71254947 -898935 + Charlie3 DNA MER1_type 135 498 -2212 * 3393 79 4 2 chr20 71254943 71255399 -898483 + Charlie3 DNA MER1_type 2242 2698 -12 941 274 80 41 chr20 71255418 71256228 -897654 - L1ME LINE L1 -4924 1472 651 516 343 39 33 chr20 71256395 71256701 -897181 - L1ME LINE L1 -5918 478 171 619 328 91 10 chr20 71256970 71257253 -896629 - L2 LINE L2 0 3313 3004 1018 186 37 51 chr20 71257253 71257468 -896414 + MER20 DNA MER1_type 4 215 -4 619 328 91 10 chr20 71257468 71257480 -896402 - L2 LINE L2 -309 3004 2994 223 333 73 21 chr20 71257758 71257854 -896028 - L2 LINE L2 -22 3250 3150 1265 57 0 0 chr20 71259189 71259348 -894534 + L1PA6 LINE L1 5995 6153 -1 593 292 121 18 chr20 71259352 71259684 -894198 + L1ME3 LINE L1 5797 6162 0 456 288 198 35 chr20 71260539 71261087 -892795 - L2 LINE L2 -37 3276 2623 277 182 152 0 chr20 71261116 71261182 -892700 - ORSL DNA AcHobo -27 248 173 1800 175 26 16 chr20 71261189 71261498 -892384 + AluJo SINE Alu 1 312 0 339 234 0 0 chr20 71261559 71261623 -892259 - L1MC4 LINE L1 -1363 6679 6616 317 239 111 0 chr20 71261826 71261943 -891939 - L2 LINE L2 -715 2599 2470 1378 224 85 4 chr20 71263282 71263554 -890328 - AluJb SINE Alu -18 294 1 2648 111 6 0 chr20 71263766 71264128 -889754 + THE1B LTR MaLR 1 364 0 1932 172 0 3 chr20 71264375 71264677 -889205 + AluJb SINE Alu 1 301 -11 347 216 104 30 chr20 71264906 71265040 -888842 + MIR SINE MIR 48 191 -71 1621 234 111 43 chr20 71265731 71266283 -887599 - MLT1E LTR MaLR 0 593 5 245 256 35 128 chr20 71266703 71266875 -887007 + MIR SINE MIR 107 262 0 328 248 36 109 chr20 71266882 71267019 -886863 - MIR3 SINE MIR -52 156 30 398 322 29 47 chr20 71268046 71268217 -885665 - MER5B DNA MER1_type -9 169 2 282 287 45 83 chr20 71268967 71269124 -884758 + MIR SINE MIR 100 250 -12 464 243 168 72 chr20 71269141 71269516 -884366 - MLT1H LTR MaLR 0 549 139 22 35 0 0 chr20 71270606 71270635 -883247 + AT_rich Low_complexity Low_complexity 1 29 0 322 314 33 8 chr20 71271010 71271131 -882751 + MIR SINE MIR 21 144 -118 253 167 0 128 chr20 71272723 71272801 -881081 - MLT1H LTR MaLR 0 549 482 240 280 196 37 chr20 71273253 71273360 -880522 + MIR SINE MIR 16 139 -69 249 269 204 19 chr20 71273383 71273491 -880391 + MIR SINE MIR 22 149 -113 887 229 109 58 chr20 71273664 71273833 -880049 + MLT1C LTR MaLR 14 173 -294 1673 168 9 84 chr20 71273833 71274155 -879727 + AluJo SINE Alu 5 302 -10 887 229 109 58 chr20 71274155 71274417 -879465 + MLT1C LTR MaLR 173 467 0 216 256 231 19 chr20 71274646 71274802 -879080 - L2 LINE L2 -247 3066 2878 182 37 37 0 chr20 71274976 71275003 -878879 + (TTCTCC)n Simple_repeat Simple_repeat 3 30 0 1887 154 73 22 chr20 71275436 71275793 -878089 - THE1C LTR MaLR 0 375 1 350 293 61 94 chr20 71276107 71276391 -877491 + L3 LINE CR1 1049 1318 -259 204 40 0 0 chr20 71276391 71276416 -877466 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 350 293 61 94 chr20 71276416 71276523 -877359 + L3 LINE CR1 1318 1427 -150 342 293 50 14 chr20 71277367 71277507 -876375 - L2 LINE L2 -11 3302 3158 266 307 7 7 chr20 71277661 71277798 -876084 + (TG)n Simple_repeat Simple_repeat 1 137 0 1835 136 33 0 chr20 71329211 71329542 -824340 + AluY SINE Alu 1 341 0 342 256 12 6 chr20 71329571 71329731 -824151 + (TGGA)n Simple_repeat Simple_repeat 4 164 0 485 306 101 10 chr20 71330594 71330803 -823079 + L3 LINE CR1 1129 1356 -221 515 313 139 44 chr20 71330813 71331313 -822569 + L2 LINE L2 2766 3313 0 974 248 101 6 chr20 71332487 71332990 -820892 + MER92B LTR ERV1 8 623 -13 198 339 94 18 chr20 71332996 71333167 -820715 - MIR3 SINE MIR -4 204 21 531 270 0 0 chr20 71333553 71333690 -820192 - L1MA10 LINE L1 -212 5977 5841 * 1396 202 60 29 chr20 71333684 71334031 -819851 + L1MA10 LINE L1 5975 6332 -2 238 293 16 16 chr20 71334301 71334424 -819458 + (TA)n Simple_repeat Simple_repeat 2 124 0 251 357 24 16 chr20 71334470 71334596 -819286 - MIR SINE MIR -107 155 29 2290 210 55 32 chr20 71334760 71335345 -818537 - Charlie1a DNA MER1_type -302 1153 556 338 197 26 0 chr20 71335349 71335425 -818457 - L1MC2 LINE L1 -13 6331 6254 2886 152 23 65 chr20 71335447 71335673 -818209 - L1MC3 LINE L1 -152 7633 7399 2140 148 50 6 chr20 71335673 71336032 -817850 - THE1C LTR MaLR 0 375 1 2886 152 23 65 chr20 71336032 71336403 -817479 - L1MC3 LINE L1 -386 7399 7061 1858 270 28 23 chr20 71336405 71336971 -816911 - Charlie1a DNA MER1_type -886 569 1 768 278 108 23 chr20 71337888 71338277 -815605 - MLT1L LTR MaLR -23 592 171 202 279 58 115 chr20 71338613 71338717 -815165 + L3 LINE CR1 1478 1575 -2 252 0 0 0 chr20 71339053 71339081 -814801 + (AGATG)n Simple_repeat Simple_repeat 3 30 0 959 221 161 82 chr20 71340209 71340696 -813186 + MLT1E LTR MaLR 1 630 -24 322 114 0 0 chr20 71340770 71340814 -813068 + MER5A DNA MER1_type 2 45 -144 842 239 0 0 chr20 71340881 71341048 -812834 + MER5A DNA MER1_type 21 187 -2 293 241 41 69 chr20 71341048 71341193 -812689 - MLT1K LTR MaLR 0 588 448 254 322 48 17 chr20 71341358 71341474 -812408 - MIR SINE MIR -62 146 34 185 0 40 0 chr20 71343969 71343994 -809888 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 279 312 63 67 chr20 71344031 71344316 -809566 - MLT1K LTR MaLR -14 574 291 359 278 174 52 chr20 71344408 71344638 -809244 + MER20B DNA MER1_type 71 328 -455 1698 183 88 48 chr20 71344738 71344963 -808919 - MSTB LTR MaLR -12 414 165 2300 61 0 0 chr20 71344963 71345242 -808640 - AluY SINE Alu -32 279 1 1698 183 88 48 chr20 71345242 71345414 -808468 - MSTB LTR MaLR -261 165 1 617 179 73 7 chr20 71345527 71345678 -808204 + MER20B DNA MER1_type 552 712 -71 774 247 171 63 chr20 71345890 71346351 -807531 - MLT2B1 LTR ERVL -8 512 2 238 226 0 48 chr20 71346635 71346697 -807185 - MER20B DNA MER1_type -8 211 153 732 188 36 36 chr20 71346935 71347100 -806782 - MER20B DNA MER1_type -54 165 1 244 369 81 0 chr20 71348304 71348502 -805380 - MIR SINE MIR -17 245 32 199 321 18 0 chr20 71348756 71348812 -805070 + L2 LINE L2 2697 2753 -561 347 268 97 47 chr20 71348834 71349278 -804604 + L1ME2 LINE L1 3045 3510 -2636 1511 194 0 23 chr20 71349278 71349577 -804305 + AluJo SINE Alu 1 292 -20 422 327 93 4 chr20 71349896 71350122 -803760 - LTR16A LTR ERVL -89 361 116 2171 247 109 57 chr20 71350240 71351311 -802571 + L1ME2 LINE L1 4306 5424 -774 1915 133 3 7 chr20 71351311 71351613 -802269 - AluSx SINE Alu 0 312 12 2171 247 109 57 chr20 71351613 71352010 -801872 + L1ME2 LINE L1 5424 5799 -399 483 292 117 19 chr20 71352050 71352314 -801568 + L1ME2 LINE L1 5866 6155 -9 342 0 0 0 chr20 71352542 71352580 -801302 + (TG)n Simple_repeat Simple_repeat 2 39 0 773 314 53 16 chr20 71352631 71352876 -801006 + MIR SINE MIR 1 254 -8 261 327 82 0 chr20 71352983 71353093 -800789 + MIR3 SINE MIR 42 160 -48 227 161 32 16 chr20 71353136 71353198 -800684 + MER113 DNA MER1_type? 68 130 -391 829 227 0 12 chr20 71354025 71354197 -799685 - MER58B DNA MER1_type -3 338 169 207 0 0 0 chr20 71354587 71354610 -799272 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 440 86 21 86 chr20 71354621 71354714 -799168 - L1MB7 LINE L1 -1 6183 6097 248 211 0 0 chr20 71354720 71354772 -799110 - MER82 DNA MER2_type -8 645 594 446 274 225 52 chr20 71356332 71356719 -797163 + MLT1K LTR MaLR 129 582 -6 2175 221 53 8 chr20 71357641 71358170 -795712 - L1MB7 LINE L1 -15 6169 5617 372 321 0 9 chr20 71358255 71358364 -795518 + MIR SINE MIR 48 155 -107 5858 140 11 9 chr20 71358751 71360434 -793448 + L1MA3 LINE L1 4445 6131 -174 321 125 5 98 chr20 71360442 71360608 -793274 + (TTTAA)n Simple_repeat Simple_repeat 1 150 -17 897 111 9 120 chr20 71360608 71360825 -793057 + L1MA3 LINE L1 6111 6303 -2 321 125 5 98 chr20 71360825 71360842 -793040 + (TTTAA)n Simple_repeat Simple_repeat 150 167 0 204 81 0 54 chr20 71360830 71360867 -793015 + (TTTTTA)n Simple_repeat Simple_repeat 2 36 0 * 606 290 141 28 chr20 71360955 71361210 -792672 + L1M4 LINE L1 3693 3976 -2170 7619 32 0 0 chr20 71361229 71362719 -791163 - L1PA4 LINE L1 -3 6152 4662 180 0 0 0 chr20 71363219 71363239 -790643 + (T)n Simple_repeat Simple_repeat 1 20 0 418 270 48 57 chr20 71363241 71363399 -790483 - MIR SINE MIR -52 156 31 510 315 102 13 chr20 71363769 71364004 -789878 - MIR SINE MIR 0 262 7 396 40 0 0 chr20 71364767 71364817 -789065 + (TCCA)n Simple_repeat Simple_repeat 3 52 0 215 274 11 140 chr20 71365170 71365349 -788533 - L2 LINE L2 -85 3187 3032 350 319 114 6 chr20 71365356 71365522 -788360 + MIR SINE MIR 79 262 0 626 304 35 75 chr20 71366433 71366805 -787077 - L2 LINE L2 0 3272 2916 579 300 35 44 chr20 71367420 71367661 -786221 - MIR SINE MIR -4 258 18 238 333 39 0 chr20 71367734 71367812 -786070 - L2 LINE L2 -2 3311 3231 1515 157 88 11 chr20 71367815 71368089 -785793 + MLT1A1 LTR MaLR 1 295 -70 221 294 47 24 chr20 71368099 71368184 -785698 - L2 LINE L2 -75 3238 3152 435 290 149 44 chr20 71368366 71368801 -785081 - L2 LINE L2 -3 3310 2830 262 182 92 52 chr20 71368936 71369042 -784840 - MIR SINE MIR -66 142 32 505 330 20 5 chr20 71369698 71369898 -783984 + MIR SINE MIR 45 248 -14 2329 53 13 13 chr20 71370509 71370812 -783070 - AluY SINE Alu -8 303 1 291 277 46 62 chr20 71370814 71370944 -782938 - MER5A DNA MER1_type -4 185 58 3233 205 52 43 chr20 71371203 71371993 -781889 - MLT1A1-int LTR MaLR -938 797 1 1523 219 24 35 chr20 71371993 71372362 -781520 - MLT1A1 LTR MaLR 0 365 1 245 203 61 32 chr20 71372496 71372614 -781268 + L1MC5 LINE L1 7859 8042 0 488 288 141 20 chr20 71373373 71373571 -780311 + MIR SINE MIR 41 262 0 205 286 129 37 chr20 71373825 71374042 -779840 + L2 LINE L2 2741 2977 -337 2123 113 0 0 chr20 71375430 71375722 -778160 + AluSx SINE Alu 1 292 -20 202 162 0 27 chr20 71376414 71376451 -777431 + L2 LINE L2 3267 3302 -11 382 267 101 51 chr20 71376761 71377157 -776725 - L1MC4 LINE L1 -51 7910 7497 205 232 61 61 chr20 71377195 71377277 -776605 - MIR SINE MIR -61 201 120 21 0 0 0 chr20 71380220 71380241 -773641 + AT_rich Low_complexity Low_complexity 1 21 0 1136 277 115 31 chr20 71380652 71381129 -772753 + MLT1H LTR MaLR 5 521 -28 225 219 0 37 chr20 71381167 71381249 -772633 + CT-rich Low_complexity Low_complexity 2 80 0 498 197 47 24 chr20 71381362 71381489 -772393 - Charlie1 DNA MER1_type -10 2751 2622 * 677 266 16 5 chr20 71381472 71381656 -772226 - Charlie1 DNA MER1_type -2519 242 57 4069 159 38 3 chr20 71381781 71382468 -771414 + MER50 LTR ERV1 1 711 -23 254 290 94 29 chr20 71382894 71383032 -770850 - MIR SINE MIR -43 219 73 180 211 105 66 chr20 71383073 71383149 -770733 - L2 LINE L2 0 3272 3194 588 265 105 24 chr20 71383334 71383829 -770053 + MLT1G1 LTR MaLR 1 593 -2 194 128 26 0 chr20 71384162 71384201 -769681 + (CTA)n Simple_repeat Simple_repeat 3 42 0 547 354 132 13 chr20 71385462 71386198 -767684 - L2 LINE L2 -12 3301 2472 377 329 62 41 chr20 71386367 71386610 -767272 + MIR SINE MIR 14 261 -1 216 158 0 0 chr20 71386615 71386653 -767229 + (CAT)n Simple_repeat Simple_repeat 2 39 0 225 83 0 0 chr20 71387186 71387222 -766660 + (CA)n Simple_repeat Simple_repeat 2 37 0 791 219 39 0 chr20 71387228 71387406 -766476 + L1MD2 LINE L1 6145 6329 -30 228 167 0 100 chr20 71387419 71387479 -766403 + L1MC4 LINE L1 6652 6705 -1337 305 324 88 40 chr20 71387645 71388043 -765839 + L2 LINE L2 2358 2774 -540 2119 248 85 25 chr20 71388336 71388643 -765239 - L1ME2 LINE L1 -2 6162 5875 2199 99 0 0 chr20 71388643 71388937 -764945 - AluSx SINE Alu -18 294 1 2119 248 85 25 chr20 71388937 71389278 -764604 - L1ME2 LINE L1 -289 5875 5475 1691 160 0 31 chr20 71389497 71389790 -764092 - AluJo SINE Alu -23 289 6 1019 240 37 15 chr20 71389796 71390190 -763692 - L1ME2 LINE L1 -728 5438 5036 672 249 162 20 chr20 71390430 71390627 -763255 - MLT1H1 LTR MaLR -289 266 42 940 296 7 4 chr20 71390684 71390958 -762924 - L1ME2 LINE L1 -1833 4313 4039 329 319 57 14 chr20 71390966 71391107 -762775 + L2 LINE L2 3165 3311 -2 1754 225 131 19 chr20 71391143 71391569 -762313 + MLT2B1 LTR ERVL 1 474 -46 2044 161 17 3 chr20 71391569 71391924 -761958 + MER47A DNA MER2_type 2 361 -5 255 182 0 0 chr20 71391948 71392003 -761879 + MLT2B1 LTR ERVL 461 515 0 441 0 0 0 chr20 71392451 71392500 -761382 + (T)n Simple_repeat Simple_repeat 1 49 0 586 268 41 61 chr20 71392613 71392859 -761023 + MIR SINE MIR 22 262 0 1895 146 164 11 chr20 71392945 71393316 -760566 - MSTA LTR MaLR 0 428 1 234 287 21 21 chr20 71395194 71395288 -758594 + MER53 DNA DNA 2 95 -94 513 324 77 25 chr20 71395652 71396140 -757742 - L1ME3A LINE L1 -233 5937 5410 2097 123 7 13 chr20 71396502 71396804 -757078 - AluSx SINE Alu -12 300 1 316 272 219 40 chr20 71396819 71397043 -756839 - L1MEd LINE L1 -5732 387 124 3183 226 53 14 chr20 71397142 71398609 -755273 + L1MD2 LINE L1 4639 6162 -197 510 274 0 0 chr20 71398613 71398792 -755090 + (CA)n Simple_repeat Simple_repeat 2 180 0 312 234 0 0 chr20 71398810 71398904 -754978 + (CA)n Simple_repeat Simple_repeat 1 94 0 781 165 188 0 chr20 71398914 71399084 -754798 + L1MD2 LINE L1 6144 6345 -14 2159 129 3 0 chr20 71399441 71399743 -754139 + AluSx SINE Alu 1 303 -9 248 205 169 0 chr20 71400557 71400640 -753242 - MIR SINE MIR -75 187 91 731 83 0 9 chr20 71401485 71401594 -752288 + (TTTC)n Simple_repeat Simple_repeat 1 108 0 199 228 167 53 chr20 71402067 71402181 -751701 - MER5A DNA MER1_type -36 153 27 412 347 56 19 chr20 71402436 71402652 -751230 + MIR SINE MIR 16 239 -23 322 234 136 80 chr20 71404008 71404283 -749599 - MLT1D LTR MaLR -91 376 69 2576 130 59 0 chr20 71404283 71404691 -749191 - MER57B LTR ERV1 0 434 3 322 234 136 80 chr20 71404691 71404765 -749117 - MLT1D LTR MaLR -398 69 1 242 320 29 19 chr20 71404773 71404876 -749006 + MIR SINE MIR 103 206 -56 287 254 216 15 chr20 71404883 71405017 -748865 + MER5A DNA MER1_type 29 189 0 342 0 0 0 chr20 71405203 71405241 -748641 + (T)n Simple_repeat Simple_repeat 1 38 0 3246 108 17 4 chr20 71405289 71405762 -748120 - L1PA10 LINE L1 0 6168 5690 809 67 0 59 chr20 71405762 71405893 -747989 + L1PA10 LINE L1 5578 5687 -481 23 54 0 0 chr20 71405943 71405980 -747902 + AT_rich Low_complexity Low_complexity 1 37 0 224 119 0 24 chr20 71406934 71406976 -746906 + (TC)n Simple_repeat Simple_repeat 1 41 0 1035 178 8 2 chr20 71408175 71408413 -745469 + CT-rich Low_complexity Low_complexity 1 236 -296 2011 141 86 9 chr20 71408413 71408761 -745121 - THE1C LTR MaLR 0 375 1 1035 178 8 2 chr20 71408761 71408873 -745009 + CT-rich Low_complexity Low_complexity 236 532 0 288 209 38 29 chr20 71408931 71409036 -744846 + CT-rich Low_complexity Low_complexity 2 107 0 503 283 101 0 chr20 71409218 71409494 -744388 - MER90 LTR ERV1 -17 558 255 284 328 53 38 chr20 71412103 71412241 -741641 + MER5A DNA MER1_type 3 152 -37 8969 245 56 21 chr20 71412460 71415526 -738356 - L1MCb LINE L1 -1124 5440 2017 2129 109 0 11 chr20 71415526 71415850 -738032 + AluSg SINE Alu 1 321 0 8969 245 56 21 chr20 71415850 71417938 -735944 - L1MCb LINE L1 -4547 2017 4 296 359 10 0 chr20 71418014 71418117 -735765 - MIR SINE MIR -113 149 46 652 249 35 12 chr20 71418132 71418305 -735577 - MER45A DNA AcHobo 0 178 2 2494 90 0 0 chr20 71418635 71418936 -734946 - AluSq SINE Alu -12 301 1 270 277 53 43 chr20 71419152 71419246 -734636 - MER5B DNA MER1_type -82 96 2 343 266 18 37 chr20 71419604 71419713 -734169 - MIR SINE MIR -110 152 46 231 61 0 0 chr20 71421187 71421220 -732662 + (CA)n Simple_repeat Simple_repeat 2 34 0 2319 144 21 0 chr20 71421304 71421685 -732197 + MLT1B LTR MaLR 2 390 0 266 290 14 0 chr20 71421811 71421880 -732002 - L2 LINE L2 -1 3312 3243 439 257 42 28 chr20 71423771 71424011 -729871 - MLT1E1 LTR MaLR -396 230 4 837 143 37 0 chr20 71424224 71424784 -729098 + (TCCA)n Simple_repeat Simple_repeat 1 580 0 292 325 151 8 chr20 71424790 71424916 -728966 - L2 LINE L2 -5 3267 3124 969 203 59 0 chr20 71424929 71425131 -728751 - MER20 DNA MER1_type -5 214 1 203 359 31 16 chr20 71426453 71426581 -727301 + MIR SINE MIR 87 216 -46 502 289 36 49 chr20 71426650 71426875 -727007 + MLT1K LTR MaLR 26 247 -341 259 286 181 0 chr20 71427903 71428008 -725874 + L2 LINE L2 3190 3313 0 553 272 129 9 chr20 71428088 71428312 -725570 - MLT1J LTR MaLR -161 350 100 1922 153 0 41 chr20 71428359 71428673 -725209 + AluSx SINE Alu 1 301 -11 360 357 154 28 chr20 71429298 71429844 -724038 + L3 LINE CR1 614 1228 -349 396 0 0 0 chr20 71434211 71434255 -719627 + (TGGA)n Simple_repeat Simple_repeat 2 45 0 590 231 36 89 chr20 71435497 71435722 -718160 + MER20 DNA MER1_type 7 219 0 236 148 0 49 chr20 71436227 71436288 -717594 + (CAGCC)n Simple_repeat Simple_repeat 3 60 0 25 0 0 0 chr20 71437637 71437662 -716220 + AT_rich Low_complexity Low_complexity 1 25 0 1161 218 13 23 chr20 71438100 71438403 -715479 - MER33 DNA MER1_type -23 301 2 2432 84 0 3 chr20 71439009 71439308 -714574 - AluSc SINE Alu -11 298 1 193 336 75 60 chr20 71439643 71439777 -714105 + L2 LINE L2 3076 3211 -61 255 213 13 53 chr20 71440463 71440538 -713344 + MLT1L LTR MaLR 41 112 -503 352 301 82 29 chr20 71440669 71440875 -713007 + MLT1L LTR MaLR 291 507 -108 1825 276 83 32 chr20 71441580 71441993 -711889 - L1MD3 LINE L1 -18 6148 5758 1976 170 51 58 chr20 71441993 71442445 -711437 - LTR47A LTR ERVL 0 452 4 1825 276 83 32 chr20 71442445 71442680 -711202 - L1MD3 LINE L1 -408 5758 5537 192 77 0 0 chr20 71442680 71442706 -711176 + (TA)n Simple_repeat Simple_repeat 2 27 0 2135 125 7 3 chr20 71442706 71443010 -710872 - AluY SINE Alu -6 305 1 1825 276 83 32 chr20 71443010 71443068 -710814 - L1MD3 LINE L1 -629 5537 5483 4372 93 5 19 chr20 71443068 71443694 -710188 - L1PB2 LINE L1 0 6151 5535 1825 276 83 32 chr20 71443694 71443792 -710090 - L1MD3 LINE L1 -683 5483 5328 388 133 17 0 chr20 71444854 71444914 -708968 - MLT1D LTR MaLR -444 61 1 1115 238 143 3 chr20 71447822 71448213 -705669 - MLT1D LTR MaLR -55 450 5 270 332 58 10 chr20 71448915 71449123 -704759 - MLT1K LTR MaLR -302 286 69 2367 108 0 3 chr20 71449223 71449528 -704354 + AluSx SINE Alu 2 305 -7 399 263 23 61 chr20 71451104 71451127 -702755 + MIR SINE MIR 93 115 -147 2354 135 11 8 chr20 71451127 71451489 -702393 + THE1B LTR MaLR 2 364 0 399 263 23 61 chr20 71451489 71451628 -702254 + MIR SINE MIR 115 248 -14 579 225 84 34 chr20 71451731 71451909 -701973 + MER5A DNA MER1_type 3 189 0 1428 219 70 59 chr20 71452246 71452721 -701161 - MLT1D LTR MaLR -21 484 5 453 343 22 17 chr20 71452763 71452941 -700941 + MIR SINE MIR 1 179 -83 361 293 61 94 chr20 71453553 71453660 -700222 - L3 LINE CR1 -150 1427 1318 204 40 0 0 chr20 71453660 71453685 -700197 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 361 293 61 94 chr20 71453685 71453969 -699913 - L3 LINE CR1 -259 1318 1049 1909 151 73 22 chr20 71454283 71454640 -699242 + THE1C LTR MaLR 1 375 0 182 37 37 0 chr20 71455073 71455100 -698782 + (GGAGAA)n Simple_repeat Simple_repeat 3 30 0 216 256 231 19 chr20 71455274 71455430 -698452 + L2 LINE L2 2878 3066 -247 887 229 109 58 chr20 71455659 71455921 -697961 - MLT1C LTR MaLR 0 467 173 1673 168 9 84 chr20 71455921 71456243 -697639 - AluJo SINE Alu -10 302 5 887 229 109 58 chr20 71456243 71456412 -697470 - MLT1C LTR MaLR -294 173 14 249 269 204 19 chr20 71456585 71456693 -697189 - MIR SINE MIR -113 149 22 240 280 196 37 chr20 71456716 71456823 -697059 - MIR SINE MIR -69 139 16 253 167 0 128 chr20 71457275 71457353 -696529 + MLT1H LTR MaLR 482 549 0 322 314 33 8 chr20 71458945 71459066 -694816 - MIR SINE MIR -118 144 21 22 35 0 0 chr20 71459441 71459470 -694412 + AT_rich Low_complexity Low_complexity 1 29 0 464 243 168 72 chr20 71460560 71460935 -692947 + MLT1H LTR MaLR 139 549 0 282 287 45 83 chr20 71460952 71461109 -692773 - MIR SINE MIR -12 250 100 398 322 29 47 chr20 71461859 71462030 -691852 + MER5B DNA MER1_type 2 169 -9 328 248 36 109 chr20 71463057 71463194 -690688 + MIR3 SINE MIR 30 156 -52 245 256 35 128 chr20 71463201 71463373 -690509 - MIR SINE MIR 0 262 107 1618 234 111 43 chr20 71463793 71464345 -689537 + MLT1E LTR MaLR 5 593 0 368 209 104 30 chr20 71465036 71465170 -688712 - MIR SINE MIR -71 191 48 1932 172 0 3 chr20 71465399 71465701 -688181 - AluJb SINE Alu -11 301 1 2648 111 6 0 chr20 71465948 71466310 -687572 - THE1B LTR MaLR 0 364 1 1378 224 85 4 chr20 71466522 71466794 -687088 + AluJb SINE Alu 1 294 -18 317 239 111 0 chr20 71468134 71468251 -685631 + L2 LINE L2 2470 2599 -715 339 234 0 0 chr20 71468454 71468518 -685364 + L1MC4 LINE L1 6616 6679 -1363 1800 175 26 16 chr20 71468579 71468888 -684994 - AluJo SINE Alu 0 312 1 277 182 152 0 chr20 71468895 71468961 -684921 + ORSL DNA AcHobo 173 248 -27 456 288 198 35 chr20 71468990 71469538 -684344 + L2 LINE L2 2623 3276 -37 593 292 121 18 chr20 71470393 71470725 -683157 - L1ME3 LINE L1 0 6162 5797 1265 57 0 0 chr20 71470729 71470888 -682994 - L1PA6 LINE L1 -1 6153 5995 200 300 0 0 chr20 71471434 71471494 -682388 - MIR SINE MIR -114 148 89 1685 216 82 23 chr20 71472171 71472644 -681238 - MLT1D LTR MaLR -4 501 1 285 330 62 0 chr20 71473632 71473744 -680138 - L2 LINE L2 0 3272 3154 2274 86 0 7 chr20 71474604 71474961 -678921 - AluY SINE Alu 0 311 1 490 308 26 19 chr20 71475605 71475761 -678121 - MER5A DNA MER1_type -22 167 11 279 250 54 11 chr20 71475850 71475942 -677940 - MER5A DNA MER1_type -84 105 10 270 365 55 0 chr20 71476090 71476235 -677647 - MER117 DNA MER1_type -1 196 44 2288 123 6 3 chr20 71479194 71479536 -674346 + L1PA13 LINE L1 5810 6152 -11 239 329 14 0 chr20 71479803 71479876 -674006 - L3 LINE CR1 -149 1428 1355 4107 89 9 22 chr20 71480274 71480857 -673025 - L1PA10 LINE L1 -4 6164 5590 384 271 108 48 chr20 71480935 71481101 -672781 + MER5B DNA MER1_type 3 178 0 314 323 55 24 chr20 71481828 71481992 -671890 + MER5B DNA MER1_type 2 170 -8 256 298 116 45 chr20 71482151 71482349 -671533 + L2 LINE L2 3085 3296 -17 233 192 19 0 chr20 71482410 71482462 -671420 - MIR SINE MIR -77 131 79 204 158 0 0 chr20 71482951 71482989 -670893 + (CATA)n Simple_repeat Simple_repeat 2 39 0 255 218 39 13 chr20 71482996 71483074 -670808 + (TATATG)n Simple_repeat Simple_repeat 5 84 0 677 271 49 53 chr20 71483075 71483322 -670560 - MIR SINE MIR -11 251 6 733 208 6 3 chr20 71483326 71483690 -670192 + (ATG)n Simple_repeat Simple_repeat 1 365 0 377 257 7 0 chr20 71483709 71483861 -670021 + (ATG)n Simple_repeat Simple_repeat 1 153 0 603 278 129 0 chr20 71483868 71484062 -669820 - MIR SINE MIR -10 252 34 258 217 24 36 chr20 71485167 71485250 -668632 + GA-rich Low_complexity Low_complexity 3 84 0 26 0 0 0 chr20 71485478 71485504 -668378 + AT_rich Low_complexity Low_complexity 1 26 0 286 315 7 70 chr20 71486025 71486168 -667714 - MIR3 SINE MIR -71 137 4 234 226 19 0 chr20 71486317 71486370 -667512 + Tigger5 DNA MER2_type 2 55 -2268 * 235 267 13 53 chr20 71486340 71486415 -667467 + Tigger5 DNA MER2_type 2251 2322 -1 264 254 107 33 chr20 71486462 71486735 -667147 + L1M4 LINE L1 5254 5556 -622 2620 59 0 0 chr20 71486921 71487225 -666657 + AluY SINE Alu 1 304 -7 26 0 0 0 chr20 71487434 71487460 -666422 + AT_rich Low_complexity Low_complexity 1 26 0 720 283 43 74 chr20 71488604 71489049 -664833 - L2 LINE L2 -11 3302 2872 326 306 20 0 chr20 71489188 71489286 -664596 + L2 LINE L2 3173 3272 0 325 316 90 47 chr20 71489466 71489700 -664182 - MIR SINE MIR 0 262 19 249 273 13 13 chr20 71490100 71490177 -663705 + CT-rich Low_complexity Low_complexity 3 79 0 241 314 57 7 chr20 71490178 71490318 -663564 + MLT1J2 LTR MaLR 110 256 -194 222 62 0 0 chr20 71490318 71490350 -663532 + (TTG)n Simple_repeat Simple_repeat 3 34 0 1037 216 20 5 chr20 71490380 71490584 -663298 - MER58A DNA MER1_type -17 207 1 1475 229 119 30 chr20 71491707 71492170 -661712 + MLT1D LTR MaLR 1 504 -1 449 270 126 28 chr20 71492242 71492457 -661425 - MIR SINE MIR -14 248 13 697 213 16 0 chr20 71494406 71494651 -659231 + (ATG)n Simple_repeat Simple_repeat 1 249 0 568 207 0 18 chr20 71494651 71494820 -659062 + (ATGGTG)n Simple_repeat Simple_repeat 4 169 0 281 248 28 0 chr20 71494824 71494969 -658913 + (ATG)n Simple_repeat Simple_repeat 1 149 0 545 140 32 32 chr20 71494982 71495139 -658743 + (ATG)n Simple_repeat Simple_repeat 2 158 0 987 258 10 0 chr20 71495174 71495383 -658499 + MER58A DNA MER1_type 1 211 -13 228 242 101 50 chr20 71495477 71495576 -658306 + MER21B LTR ERV1 1 104 -759 2448 244 84 38 chr20 71495597 71496343 -657539 + MER21B LTR ERV1 22 802 -61 333 276 81 60 chr20 71497650 71497675 -656207 - L1ME4a LINE L1 -14 6107 6084 234 0 0 0 chr20 71497675 71497701 -656181 + (TG)n Simple_repeat Simple_repeat 2 27 0 333 276 81 60 chr20 71497701 71497715 -656167 - L1ME4a LINE L1 -37 6084 6072 1689 163 20 10 chr20 71497715 71498010 -655872 - AluJb SINE Alu -14 298 1 333 276 81 60 chr20 71498010 71498338 -655544 - L1ME4a LINE L1 -49 6072 5731 318 209 33 33 chr20 71499188 71499279 -654603 + L1MC5 LINE L1 7835 7925 -36 291 54 0 0 chr20 71500972 71501009 -652873 + (TC)n Simple_repeat Simple_repeat 1 37 0 230 269 233 47 chr20 71501214 71501579 -652303 - L2 LINE L2 -49 3264 2832 203 335 211 0 chr20 71502272 71502433 -651449 - MIR SINE MIR -54 208 14 541 259 38 1 chr20 71503879 71504059 -649823 - L1MD2 LINE L1 -14 7968 6194 404 237 0 11 chr20 71504675 71504768 -649114 - MER5A DNA MER1_type -87 102 11 521 289 6 6 chr20 71504916 71505082 -648800 + MIR SINE MIR 84 249 -13 769 197 6 6 chr20 71505151 71505264 -648618 + (ATG)n Simple_repeat Simple_repeat 1 112 -557 2579 77 0 0 chr20 71505264 71505575 -648307 + AluY SINE Alu 1 311 0 769 197 6 6 chr20 71505575 71505820 -648062 + (ATG)n Simple_repeat Simple_repeat 112 669 0 488 216 7 0 chr20 71505834 71505982 -647900 + (ATG)n Simple_repeat Simple_repeat 2 150 0 2595 64 0 3 chr20 71507069 71507381 -646501 + AluY SINE Alu 1 311 0 1790 155 26 7 chr20 71507471 71507780 -646102 - L1PA16 LINE L1 -7 6159 5845 2391 49 3 33 chr20 71507823 71508130 -645752 - AluY SINE Alu -13 298 1 6211 54 11 4 chr20 71508456 71509221 -644661 - L1PA8 LINE L1 -1 6171 5402 503 228 150 6 chr20 71509366 71509546 -644336 + MLT1B LTR MaLR 66 271 -119 2331 171 55 24 chr20 71509549 71510000 -643882 - MLT1C LTR MaLR 0 467 3 212 283 232 0 chr20 71510027 71510126 -643756 + L2 LINE L2 3187 3308 -5 2110 101 0 14 chr20 71510138 71510425 -643457 + AluSc SINE Alu 1 283 -26 187 371 26 35 chr20 71510475 71510591 -643291 - L2 LINE L2 -3 3269 3155 667 174 0 45 chr20 71510893 71511004 -642878 + L1MB3 LINE L1 6035 6139 -44 2177 139 0 0 chr20 71511004 71511307 -642575 + AluSq SINE Alu 1 303 -10 667 174 0 45 chr20 71511307 71511350 -642532 + L1MB3 LINE L1 6139 6182 -1 1786 125 8 0 chr20 71511570 71511818 -642064 + AluY SINE Alu 41 290 -21 3363 243 100 15 chr20 71512661 71514234 -639648 - L1M4 LINE L1 -2941 3703 1997 5689 167 33 8 chr20 71514264 71515590 -638292 - L1MA6 LINE L1 -2 6298 4936 1450 269 42 49 chr20 71515586 71516168 -637714 - L1M4 LINE L1 -5938 604 25 * 1580 113 36 0 chr20 71516168 71516389 -637493 + MER30 DNA MER1_type 2 230 0 1450 269 42 49 chr20 71516389 71516400 -637482 - L1M4 LINE L1 -6517 25 15 1194 216 56 83 chr20 71516489 71516624 -637258 + MLT1B LTR MaLR 3 140 -250 2653 137 5 0 chr20 71516624 71517034 -636848 + L1PA13 LINE L1 5750 6161 -2 1194 216 56 83 chr20 71517034 71517305 -636577 + MLT1B LTR MaLR 140 390 0 346 226 90 45 chr20 71517907 71518040 -635842 - L2 LINE L2 0 3313 3175 589 163 15 0 chr20 71518859 71518994 -634888 + CT-rich Low_complexity Low_complexity 1 137 0 237 263 35 82 chr20 71520751 71520922 -632960 - L2 LINE L2 -334 2979 2817 351 225 87 81 chr20 71521020 71521193 -632689 + L2 LINE L2 3133 3306 -7 351 0 0 0 chr20 71521811 71521850 -632032 + (T)n Simple_repeat Simple_repeat 1 39 0 195 375 10 10 chr20 71522037 71522133 -631749 + L2 LINE L2 3217 3312 -1 8614 199 85 51 chr20 71522215 71524904 -628978 - L1MC3 LINE L1 -8 7777 5008 1778 190 6 0 chr20 71524918 71525249 -628633 - L1PA16 LINE L1 -3 6163 5831 249 214 0 0 chr20 71525372 71525428 -628454 + (TA)n Simple_repeat Simple_repeat 1 56 0 1512 191 38 90 chr20 71526246 71526722 -627160 - L1MC3 LINE L1 -762 7023 6573 245 163 102 0 chr20 71526743 71526792 -627090 - L1MC3 LINE L1 -1144 6641 6588 259 185 77 15 chr20 71526870 71526935 -626947 - L1MC3 LINE L1 -1144 6641 6573 * 327 171 14 14 chr20 71526911 71526981 -626901 - L1MC3 LINE L1 -1144 6641 6572 450 126 58 0 chr20 71527001 71527088 -626794 - L1MC3 LINE L1 -1144 6641 6550 412 158 0 95 chr20 71527092 71527187 -626695 + LTR16C LTR ERVL 402 487 -4 267 342 17 17 chr20 71529504 71529624 -624258 + L2 LINE L2 3152 3271 -1 381 276 89 0 chr20 71530103 71530226 -623656 - L2 LINE L2 0 3272 3139 461 357 31 9 chr20 71531011 71531238 -622644 + MIR SINE MIR 1 232 -30 235 198 9 179 chr20 71532358 71532464 -621418 - MER5A DNA MER1_type -23 166 79 284 310 81 30 chr20 71532935 71533132 -620750 + MIR SINE MIR 28 234 -28 362 233 252 6 chr20 71533481 71533640 -620242 + LTR16A1 LTR ERVL 246 443 -14 216 0 0 0 chr20 71534283 71534307 -619575 + (A)n Simple_repeat Simple_repeat 1 24 0 191 243 0 27 chr20 71534586 71534660 -619222 + CT-rich Low_complexity Low_complexity 2 73 0 244 298 53 0 chr20 71534761 71534855 -619027 - MIR SINE MIR -112 150 52 223 345 43 26 chr20 71535937 71536053 -617829 + L2 LINE L2 3155 3272 0 234 0 0 0 chr20 71536893 71536919 -616963 + (A)n Simple_repeat Simple_repeat 1 26 0 232 312 43 7 chr20 71537015 71537153 -616729 + LTR16C LTR ERVL 336 478 -13 387 222 37 12 chr20 71538952 71539114 -614768 + (TATATG)n Simple_repeat Simple_repeat 1 166 0 408 101 0 116 chr20 71539148 71539346 -614536 + (ATATG)n Simple_repeat Simple_repeat 2 176 0 * 425 229 11 33 chr20 71539283 71539466 -614416 + (TA)n Simple_repeat Simple_repeat 2 180 0 409 228 53 0 chr20 71539395 71539566 -614316 + (TATATG)n Simple_repeat Simple_repeat 1 180 0 * 271 103 5 98 chr20 71539598 71539792 -614090 + (ATATG)n Simple_repeat Simple_repeat 3 178 0 192 77 0 0 chr20 71540614 71540640 -613242 + (TCCC)n Simple_repeat Simple_repeat 3 28 0 345 47 0 0 chr20 71540640 71540683 -613199 + (TG)n Simple_repeat Simple_repeat 2 44 0 812 237 106 0 chr20 71541152 71541350 -612532 - MER58A DNA MER1_type -5 219 1 2438 148 77 7 chr20 71541493 71541947 -611935 + MER66B LTR ERV1 1 486 0 1814 173 0 0 chr20 71543017 71543335 -610547 + AluSx SINE Alu 1 318 0 2329 114 0 0 chr20 71543865 71544164 -609718 - AluSx SINE Alu -13 299 1 3164 164 220 19 chr20 71544442 71545288 -608594 + MER52C LTR ERV1 1 1278 0 2737 219 102 26 chr20 71545473 71546279 -607603 + L1ME1 LINE L1 5294 6166 0 22 0 0 30 chr20 71546279 71546291 -607591 + AT_rich Low_complexity Low_complexity 1 12 -20 2211 96 21 0 chr20 71546291 71546573 -607309 - AluSc SINE Alu -21 288 1 22 0 0 30 chr20 71546573 71546593 -607289 + AT_rich Low_complexity Low_complexity 12 32 0 211 307 157 6 chr20 71547566 71547732 -606150 + MIR SINE MIR 33 223 -39 386 267 82 7 chr20 71548630 71548765 -605117 + L2 LINE L2 3168 3312 -1 596 194 18 12 chr20 71548765 71548930 -604952 + GA-rich Low_complexity Low_complexity 1 166 0 2305 127 3 3 chr20 71549539 71549877 -604005 - L1PA15 LINE L1 -11 6154 5817 4163 205 50 25 chr20 71552214 71553219 -600663 - L1MC3 LINE L1 0 7785 6756 208 271 0 0 chr20 71553314 71553373 -600509 - MIR SINE MIR -75 187 129 2273 113 0 7 chr20 71555138 71555447 -598435 + AluSx SINE Alu 1 307 -5 1876 232 150 23 chr20 71555845 71556419 -597463 - MLT1E1 LTR MaLR 0 654 8 258 240 42 10 chr20 71557856 71557952 -595930 - MER113 DNA MER1_type? -422 99 1 351 269 62 53 chr20 71557955 71558163 -595719 - L1ME LINE L1 -341 5780 5571 264 59 0 0 chr20 71558373 71558407 -595475 + (TC)n Simple_repeat Simple_repeat 2 35 0 683 266 77 28 chr20 71558961 71559314 -594568 + MER113 DNA MER1_type? 42 411 -110 2288 199 8 109 chr20 71559466 71560209 -593673 + L1 LINE L1 3818 4485 -1661 1668 128 0 21 chr20 71560237 71560480 -593402 - AluSx SINE Alu -74 238 1 2703 192 96 4 chr20 71560480 71561043 -592839 - L1MB2 LINE L1 -15 6156 5542 206 264 9 123 chr20 71561556 71561662 -592220 + MIR SINE MIR 118 211 -51 432 209 8 15 chr20 71561692 71561826 -592056 + CT-rich Low_complexity Low_complexity 5 137 0 2271 129 91 15 chr20 71561868 71562264 -591618 + MSTA LTR MaLR 1 426 -2 241 233 289 0 chr20 71562689 71562779 -591103 + L2 LINE L2 3197 3312 -1 196 274 0 16 chr20 71562973 71563035 -590847 + L2 LINE L2 2916 2976 -337 259 309 68 0 chr20 71564233 71564333 -589549 + MIR SINE MIR 13 106 -102 2524 123 3 8 chr20 71565923 71566289 -587593 + THE1B LTR MaLR 1 364 0 186 348 0 0 chr20 71566364 71566433 -587449 - L2 LINE L2 -3 3269 3201 180 348 58 40 chr20 71566636 71566860 -587022 - MIR SINE MIR -33 229 2 23 0 0 0 chr20 71566959 71566982 -586900 + AT_rich Low_complexity Low_complexity 1 23 0 841 143 49 85 chr20 71567230 71567453 -586429 + MER20 DNA MER1_type 1 215 -4 2090 120 7 0 chr20 71569570 71569853 -584029 - AluSx SINE Alu -27 285 1 1589 232 134 30 chr20 71570004 71570543 -583339 - L1MD3 LINE L1 -10 8403 7809 425 237 21 10 chr20 71570545 71570642 -583240 - MER58 DNA MER1_type -3 2417 2320 219 69 0 0 chr20 71570667 71570696 -583186 + (A)n Simple_repeat Simple_repeat 1 29 0 414 277 89 0 chr20 71570783 71570895 -582987 - MLT1F1 LTR MaLR -443 124 3 4776 254 53 40 chr20 71570899 71572309 -581573 - L1MD3 LINE L1 -719 7694 6256 1863 141 79 22 chr20 71572309 71572664 -581218 + THE1C LTR MaLR 1 375 0 4776 254 53 40 chr20 71572664 71572980 -580902 - L1MD3 LINE L1 -2157 6256 5946 7745 248 63 49 chr20 71572987 71576195 -577687 - L1MD3 LINE L1 -1302 5262 1848 904 178 0 0 chr20 71576195 71576330 -577552 - FRAM SINE Alu -41 135 1 7745 248 63 49 chr20 71576330 71577036 -576846 - L1MD3 LINE L1 -4716 1848 1153 449 269 101 19 chr20 71577032 71577240 -576642 - L1MD3 LINE L1 -5195 850 626 * 243 284 0 15 chr20 71577277 71577344 -576538 - L1M4 LINE L1 -2297 3849 3784 215 385 35 7 chr20 71579681 71579824 -574058 - L2 LINE L2 -160 3112 2966 247 326 210 10 chr20 71580141 71580451 -573431 + L2 LINE L2 1414 1785 -1529 2133 195 23 12 chr20 71580498 71580981 -572901 - MER69 DNA AcHobo 0 2526 2039 1506 237 144 15 chr20 71581016 71581481 -572401 - MER69 DNA AcHobo -658 568 44 1129 298 116 26 chr20 71581590 71582366 -571516 + L2 LINE L2 2033 2878 -436 252 317 67 0 chr20 71582372 71582476 -571406 + L2 LINE L2 3178 3288 -25 231 298 16 81 chr20 71583904 71584008 -569874 + MIR SINE MIR 34 119 -89 977 155 34 117 chr20 71584008 71584247 -569635 - MER20 DNA MER1_type 0 219 1 231 298 16 81 chr20 71584247 71584266 -569616 + MIR SINE MIR 119 138 -70 2827 186 21 36 chr20 71585017 71585226 -568656 - L1MD1 LINE L1 0 6242 6031 2730 99 11 5 chr20 71585226 71585599 -568283 + THE1C LTR MaLR 1 375 0 2827 186 21 36 chr20 71585599 71585702 -568180 - L1MD1 LINE L1 -211 6031 5928 1586 227 45 78 chr20 71585702 71586275 -567607 + MLT2B3 LTR ERVL 1 554 0 2827 186 21 36 chr20 71586275 71586591 -567291 - L1MD1 LINE L1 -314 5928 5623 2091 209 62 32 chr20 71586591 71587218 -566664 - L1MDa LINE L1 -4796 1744 1099 848 251 25 42 chr20 71587215 71587374 -566508 - L1MDa LINE L1 -6170 370 217 * 1954 132 35 57 chr20 71587374 71587746 -566136 - THE1B LTR MaLR 0 364 1 848 251 25 42 chr20 71587746 71587869 -566013 - L1MDa LINE L1 -6323 217 93 327 243 40 27 chr20 71587870 71588018 -565864 + (TATATG)n Simple_repeat Simple_repeat 3 152 0 317 284 11 0 chr20 71588018 71588106 -565776 - L1MDa LINE L1 -6435 105 17 205 290 29 0 chr20 71588546 71588615 -565267 + MER5A DNA MER1_type 113 183 -6 2285 128 0 0 chr20 71588625 71588937 -564945 + AluSx SINE Alu 1 312 0 2063 128 53 36 chr20 71590557 71590915 -562967 - THE1B LTR MaLR 0 364 1 2031 101 11 11 chr20 71591190 71591476 -562406 + AluSg1 SINE Alu 1 286 -23 1661 105 0 0 chr20 71591483 71591693 -562189 - AluSg SINE Alu -96 214 5 270 395 9 0 chr20 71595595 71595709 -558173 + L2 LINE L2 3134 3248 -24 187 313 0 0 chr20 71597913 71597980 -555902 + MIR SINE MIR 126 192 -70 4301 56 2 9 chr20 71598666 71599202 -554680 - L1PA4 LINE L1 0 6155 5624 1837 222 47 52 chr20 71599718 71600271 -553611 - MLT2B3 LTR ERVL -4 550 1 24 32 0 0 chr20 71601352 71601383 -552499 + AT_rich Low_complexity Low_complexity 1 31 0 462 18 0 0 chr20 71602008 71602063 -551819 + (CA)n Simple_repeat Simple_repeat 2 56 0 23 0 0 0 chr20 71602191 71602214 -551668 + AT_rich Low_complexity Low_complexity 1 23 0 25 31 0 0 chr20 71602358 71602390 -551492 + AT_rich Low_complexity Low_complexity 1 32 0 208 143 0 0 chr20 71602747 71602782 -551100 + (T)n Simple_repeat Simple_repeat 1 35 0 2593 204 74 9 chr20 71603105 71603670 -550212 + LTR26 LTR ERV1 1 602 -1 4972 39 2 0 chr20 71603848 71604471 -549411 + L1PA3 LINE L1 5548 6155 0 1787 97 12 8 chr20 71605323 71605571 -548311 - Charlie3 DNA MER1_type -4 2706 2458 1298 116 0 6 chr20 71605574 71605755 -548127 - AluSg SINE Alu -130 180 1 291 189 0 0 chr20 71605757 71605810 -548072 - MSTA LTR MaLR -375 53 1 1586 176 21 115 chr20 71606468 71606644 -547238 + MLT1B LTR MaLR 1 192 -198 2244 117 0 0 chr20 71606644 71606935 -546947 + AluSq SINE Alu 1 291 -22 1586 176 21 115 chr20 71606935 71607185 -546697 + MLT1B LTR MaLR 192 387 -3 299 283 25 38 chr20 71607278 71607437 -546445 + MER5A DNA MER1_type 15 171 -18 646 96 0 0 chr20 71607440 71607534 -546348 - L1MA4A LINE L1 -2 6301 6208 359 105 70 0 chr20 71607582 71607639 -546243 + L1MA4A LINE L1 6208 6268 -35 4128 37 0 0 chr20 71607639 71608112 -545770 + L1PA4 LINE L1 5670 6152 -3 256 308 15 3 chr20 71608267 71608423 -545459 + MIR SINE MIR 48 240 -22 2435 81 0 7 chr20 71608554 71608862 -545020 - AluY SINE Alu -5 306 1 246 62 0 0 chr20 71609104 71609136 -544746 + (GGAA)n Simple_repeat Simple_repeat 4 35 0 633 123 6 37 chr20 71609158 71609320 -544562 + (GGAA)n Simple_repeat Simple_repeat 3 159 0 331 116 0 29 chr20 71609342 71609411 -544471 + (GGAA)n Simple_repeat Simple_repeat 2 68 0 753 301 55 0 chr20 71609958 71610157 -543725 - REP3 LTR ERV -31 531 322 2113 275 137 15 chr20 71610158 71611367 -542515 + L1ME3 LINE L1 2805 4161 -1985 544 288 168 0 chr20 71611353 71611579 -542303 + L1ME3 LINE L1 5540 5803 -367 * 604 232 45 2 chr20 71611585 71611780 -542102 - MER58 DNA MER1_type 0 2420 3 700 266 105 27 chr20 71611781 71612115 -541767 + L1ME3 LINE L1 5801 6160 -2 380 288 20 0 chr20 71612301 71612447 -541435 + L1ME4a LINE L1 5718 5866 -255 970 113 0 0 chr20 71612653 71612786 -541096 - FLAM_C SINE Alu 0 133 1 203 270 67 0 chr20 71613092 71613181 -540701 - L2 LINE L2 -3 3269 3175 714 202 0 0 chr20 71615654 71615832 -538050 + (CA)n Simple_repeat Simple_repeat 1 178 0 262 280 49 70 chr20 71618352 71618495 -535387 - MIR SINE MIR -77 185 46 351 246 144 43 chr20 71618539 71618726 -535156 + MIR SINE MIR 35 240 -22 854 137 9 23 chr20 71619668 71619967 -533915 - MER4B LTR ERV1 0 610 261 566 125 31 10 chr20 71619967 71620063 -533819 - MER4A LTR ERV1 -566 98 1 331 344 32 0 chr20 71621216 71621341 -532541 + MIR SINE MIR 69 197 -65 193 330 170 0 chr20 71622145 71622257 -531625 - MIR SINE MIR -58 150 20 960 223 18 40 chr20 71622401 71622625 -531257 - MER20 DNA MER1_type 0 219 1 243 211 35 0 chr20 71624120 71624177 -529705 + MIR SINE MIR 66 124 -138 438 315 49 7 chr20 71624415 71624723 -529159 - L1M4 LINE L1 -3615 2531 2211 23 0 0 0 chr20 71625007 71625030 -528852 + AT_rich Low_complexity Low_complexity 1 23 0 301 289 94 37 chr20 71625173 71625654 -528228 + HAL1 LINE L1 1161 1668 -839 345 261 57 0 chr20 71626079 71626167 -527715 + MER58B DNA MER1_type 249 341 0 942 88 0 0 chr20 71626517 71626630 -527252 + AluSp SINE Alu 1 113 -200 2528 61 0 0 chr20 71626630 71626941 -526941 - L1PA8 LINE L1 -14 6158 5848 3367 189 53 4 chr20 71628215 71628899 -524983 - L1MD1 LINE L1 -1 6241 5525 2255 129 3 0 chr20 71630323 71630633 -523249 - AluSq SINE Alu -2 311 1 199 304 132 43 chr20 71630894 71631174 -522708 - L2 LINE L2 -1 3312 3008 21 0 0 0 chr20 71632391 71632412 -521470 + AT_rich Low_complexity Low_complexity 1 21 0 191 281 78 0 chr20 71632713 71632777 -521105 + MIR SINE MIR 160 228 -34 1947 98 0 4 chr20 71633813 71634068 -519814 + AluSq SINE Alu 1 254 -59 236 195 0 0 chr20 71635110 71635151 -518731 + CT-rich Low_complexity Low_complexity 1 41 0 411 276 111 63 chr20 71635641 71636054 -517828 - L1MC/D LINE L1 -2050 5758 5326 301 280 85 58 chr20 71636642 71636831 -517051 - L1MC/D LINE L1 -2128 4018 3825 497 149 0 43 chr20 71637008 71637102 -516780 - FLAM_A SINE Alu 0 142 53 2067 126 0 7 chr20 71637197 71637538 -516344 + AluSq SINE Alu 1 339 0 429 262 49 8 chr20 71638583 71638705 -515177 + MLT1C LTR MaLR 28 154 -351 2225 95 16 9 chr20 71638709 71639108 -514774 - LTR7 LTR ERV1 -2 448 1 1389 208 48 93 chr20 71639141 71639724 -514158 - LTR24B LTR ERV1 -7 569 1 731 255 68 13 chr20 71639761 71639996 -513886 + MLT1C LTR MaLR 220 467 0 230 348 51 0 chr20 71641150 71641268 -512614 - MIR SINE MIR -23 239 116 719 215 38 21 chr20 71641829 71642015 -511867 + MER5A DNA MER1_type 1 189 0 362 268 127 75 chr20 71642022 71642283 -511599 + LTR16A1 LTR ERVL 7 300 -157 4082 146 29 35 chr20 71642283 71643015 -510867 - LTR8A LTR ERV1 0 727 1 362 268 127 75 chr20 71643015 71643178 -510704 + LTR16A1 LTR ERVL 300 453 -4 2864 132 29 20 chr20 71643350 71643933 -509949 - MER4B LTR ERV1 0 779 1 2263 118 0 0 chr20 71644893 71645190 -508692 - AluSx SINE Alu -15 297 1 1565 187 154 48 chr20 71645923 71646384 -507498 - MER67D LTR ERV1 -4 510 1 311 211 35 88 chr20 71648533 71648599 -505283 - L1MC3 LINE L1 0 7785 7726 2315 144 38 24 chr20 71648599 71649021 -504861 + MSTA LTR MaLR 1 428 0 311 211 35 88 chr20 71649021 71649068 -504814 - L1MC3 LINE L1 -59 7726 7678 3552 234 34 17 chr20 71649074 71649751 -504131 - L1MB8 LINE L1 -10 6168 5504 792 66 8 16 chr20 71649751 71649873 -504009 + (TTTC)n Simple_repeat Simple_repeat 2 122 0 2119 98 0 14 chr20 71649873 71650160 -503722 - AluY SINE Alu -28 283 1 3552 234 34 17 chr20 71650160 71650994 -502888 - L1MB8 LINE L1 -674 5504 4686 1581 179 26 35 chr20 71650994 71651341 -502541 + MER2 DNA MER2_type 1 344 0 3552 234 34 17 chr20 71651341 71651923 -501959 - L1MB8 LINE L1 -1492 4686 3857 754 174 15 0 chr20 71651924 71652056 -501826 - FRAM SINE Alu -17 159 26 3385 224 42 23 chr20 71652056 71653021 -500861 - L1MC3 LINE L1 -816 6969 5987 720 281 0 4 chr20 71653030 71653265 -500617 - L1M4 LINE L1 -1432 5509 5276 * 1772 245 50 16 chr20 71653258 71653965 -499917 - L1MCc LINE L1 -2958 3983 3253 13602 122 49 25 chr20 71653971 71654027 -499855 + Tigger1 DNA MER2_type 1 54 -2364 2313 89 0 0 chr20 71654027 71654341 -499541 - AluSg1 SINE Alu 0 309 1 13602 122 49 25 chr20 71654341 71654785 -499097 + Tigger1 DNA MER2_type 54 486 -1932 7595 23 6 0 chr20 71654785 71655724 -498158 + L1PA3 LINE L1 5212 6155 0 13602 122 49 25 chr20 71655724 71656509 -497373 + Tigger1 DNA MER2_type 486 1251 -1167 2374 76 0 10 chr20 71656509 71656813 -497069 + AluSg1 SINE Alu 1 301 -8 13602 122 49 25 chr20 71656813 71657887 -495995 + Tigger1 DNA MER2_type 1251 2418 0 1660 257 47 63 chr20 71657887 71659609 -494273 - L1MCc LINE L1 -3693 3249 1375 303 288 62 55 chr20 71660880 71661026 -492856 + L1MC4a LINE L1 6118 6264 -1544 354 80 0 0 chr20 71661323 71661373 -492509 + (CA)n Simple_repeat Simple_repeat 1 50 0 339 252 52 26 chr20 71661373 71661488 -492394 + L1MC4 LINE L1 6705 6822 -1220 1105 115 0 0 chr20 71661585 71661741 -492141 - AluJb SINE Alu 0 312 157 303 213 0 0 chr20 71661742 71661817 -492065 + (TG)n Simple_repeat Simple_repeat 2 76 0 758 154 0 59 chr20 71661835 71661971 -491911 - FLAM_C SINE Alu -5 128 1 334 287 128 11 chr20 71662304 71662492 -491390 + LTR16A LTR ERVL 241 450 0 239 308 14 42 chr20 71663064 71663207 -490675 + L1MC5 LINE L1 7095 7233 -728 680 321 121 14 chr20 71663548 71664068 -489814 + MLT1K LTR MaLR 9 584 -4 27 0 0 0 chr20 71664153 71664180 -489702 + AT_rich Low_complexity Low_complexity 1 27 0 427 298 118 8 chr20 71664580 71664825 -489057 - L1MC/D LINE L1 -2185 5623 5352 258 56 0 0 chr20 71664865 71664901 -488981 + (CA)n Simple_repeat Simple_repeat 2 37 0 1790 185 12 61 chr20 71665059 71665469 -488413 + MLT1B LTR MaLR 1 390 0 231 308 15 0 chr20 71666809 71666874 -487008 + L2 LINE L2 3189 3254 -18 299 316 39 51 chr20 71667712 71668219 -485663 + L1MEc LINE L1 1238 1738 -4658 2208 114 0 3 chr20 71668343 71668641 -485241 + AluSq SINE Alu 1 297 -16 461 345 49 4 chr20 71668735 71669002 -484880 - L1MCc LINE L1 -5981 1141 863 426 293 53 0 chr20 71669149 71669357 -484525 + L1ME3A LINE L1 810 1028 -5368 870 266 49 40 chr20 71669469 71670146 -483736 + L1ME3A LINE L1 4966 5642 -589 2380 92 0 13 chr20 71670296 71670611 -483271 + AluY SINE Alu 1 311 0 306 244 44 8 chr20 71670807 71670954 -482928 + L1ME3A LINE L1 6056 6211 -22 561 68 0 0 chr20 71671216 71671290 -482592 + (GGAGA)n Simple_repeat Simple_repeat 1 74 0 362 62 38 50 chr20 71671290 71671370 -482512 + (GGAA)n Simple_repeat Simple_repeat 2 80 0 182 254 159 0 chr20 71671775 71671838 -482044 - L2 LINE L2 -10 3262 3190 381 357 97 18 chr20 71672075 71672685 -481197 + L2 LINE L2 2149 2806 -508 470 290 166 55 chr20 71672994 71673428 -480454 - L2 LINE L2 0 3313 2832 1386 272 41 28 chr20 71673476 71674131 -479751 - L1MEc LINE L1 -4320 2802 2139 21 0 0 0 chr20 71674139 71674160 -479722 + AT_rich Low_complexity Low_complexity 1 21 0 1292 247 104 5 chr20 71674223 71674665 -479217 - L1MEc LINE L1 -5121 1302 817 476 314 108 5 chr20 71674783 71675006 -478876 - L1MEc LINE L1 -5829 594 349 541 261 60 26 chr20 71675018 71675286 -478596 - L1MEc LINE L1 -6109 314 38 287 324 223 30 chr20 71675417 71675922 -477960 + L2 LINE L2 2658 3262 -51 921 226 37 9 chr20 71676212 71676429 -477453 - MER58A DNA MER1_type -1 223 1 * 2148 135 6 0 chr20 71676429 71676747 -477135 + MER1B DNA MER1_type 20 339 0 249 316 68 0 chr20 71676940 71677057 -476825 - MIR SINE MIR -14 248 124 2167 83 49 0 chr20 71677092 71677380 -476502 - AluSp SINE Alu -7 306 5 356 208 40 30 chr20 71680884 71680985 -472897 + MER5A DNA MER1_type 4 105 -84 332 296 96 22 chr20 71681316 71681451 -472431 + MER5B DNA MER1_type 8 152 -26 252 185 0 0 chr20 71681632 71681686 -472196 + (TG)n Simple_repeat Simple_repeat 2 55 0 21 0 0 0 chr20 71681911 71681932 -471950 + AT_rich Low_complexity Low_complexity 1 21 0 1267 285 103 21 chr20 71683432 71683949 -469933 - L1ME3A LINE L1 -5 6165 5692 2316 122 120 5 chr20 71683949 71684333 -469549 + MSTA LTR MaLR 1 428 0 1267 285 103 21 chr20 71684333 71684930 -468952 - L1ME3A LINE L1 -478 5692 4962 2110 231 109 38 chr20 71684960 71685262 -468620 - L1ME1 LINE L1 -5 6161 5882 1873 106 0 0 chr20 71685262 71685555 -468327 + AluSx SINE Alu 37 329 0 2110 231 109 38 chr20 71685555 71686552 -467330 - L1ME1 LINE L1 -284 5882 4769 3279 211 65 23 chr20 71686557 71688025 -465857 - L1MB7 LINE L1 -2 6418 4891 1485 259 27 11 chr20 71688042 71688597 -465285 - L1MB7 LINE L1 -3473 2909 2346 271 276 35 40 chr20 71688786 71688960 -464922 - L1MB7 LINE L1 -4180 2204 2032 498 247 62 38 chr20 71689049 71689340 -464542 - L1MB7 LINE L1 -4546 1838 1541 * 1976 261 55 15 chr20 71689338 71690011 -463871 + L1MDa LINE L1 697 1396 -5144 6273 132 70 24 chr20 71690013 71690395 -463487 + Tigger3b DNA MER2_type 1 364 -2664 4379 39 2 2 chr20 71690395 71690928 -462954 + L1PA4 LINE L1 5620 6152 -3 6273 132 70 24 chr20 71690928 71691115 -462767 + Tigger3b DNA MER2_type 364 541 -2487 231 103 0 0 chr20 71691115 71691154 -462728 + (TAAAA)n Simple_repeat Simple_repeat 2 40 0 6273 132 70 24 chr20 71691154 71691760 -462122 + Tigger3b DNA MER2_type 541 1231 0 362 137 50 181 chr20 71691761 71691943 -461939 + L1MDa LINE L1 1399 1556 -4987 501 288 64 72 chr20 71692203 71692645 -461237 - L1MEd LINE L1 -4918 1201 766 1897 147 134 13 chr20 71692645 71693025 -460857 - MSTA LTR MaLR -2 426 1 501 288 64 72 chr20 71693025 71693349 -460533 - L1MEd LINE L1 -5353 766 441 386 305 150 53 chr20 71693841 71694234 -459648 + L2 LINE L2 2883 3313 0 507 305 214 35 chr20 71695312 71696110 -457772 - L2 LINE L2 -5 3308 2358 22 0 0 0 chr20 71697768 71697790 -456092 + AT_rich Low_complexity Low_complexity 1 22 0 654 277 29 54 chr20 71698391 71698705 -455177 + MER113 DNA MER1_type? 77 382 -139 356 308 46 8 chr20 71698814 71698944 -454938 - MIR3 SINE MIR -8 200 66 2068 113 3 3 chr20 71701295 71701588 -452294 + AluSc SINE Alu 1 293 -16 22 0 0 0 chr20 71702067 71702089 -451793 + AT_rich Low_complexity Low_complexity 1 22 0 2389 60 0 3 chr20 71702281 71702581 -451301 - AluY SINE Alu -12 299 1 226 269 0 0 chr20 71703154 71703232 -450650 + L1ME LINE L1 5794 5871 -299 243 128 64 0 chr20 71703916 71703963 -449919 - L1MA8 LINE L1 -25 6266 6217 4330 183 44 30 chr20 71703992 71704443 -449439 - L1MA9 LINE L1 -73 6239 5796 204 40 0 0 chr20 71704443 71704468 -449414 + (CA)n Simple_repeat Simple_repeat 2 26 0 4330 183 44 30 chr20 71704468 71705120 -448762 - L1MA9 LINE L1 -516 5796 5121 4252 169 14 91 chr20 71705123 71706187 -447695 + L1MA9 LINE L1 4118 5099 -1047 1627 239 109 31 chr20 71706475 71706960 -446922 - MLT1F LTR MaLR -11 531 9 322 286 153 70 chr20 71707372 71707659 -446223 + L2 LINE L2 3003 3313 0 451 268 58 87 chr20 71708367 71708781 -445101 - MLT1J LTR MaLR -1 510 109 351 237 35 44 chr20 71709013 71709127 -444755 - L2 LINE L2 0 3313 3201 234 0 0 0 chr20 71709572 71709598 -444284 + (TGAA)n Simple_repeat Simple_repeat 4 29 0 570 229 0 0 chr20 71710838 71711017 -442865 + (CA)n Simple_repeat Simple_repeat 1 179 0 219 309 0 0 chr20 71711018 71711086 -442796 + (CATATA)n Simple_repeat Simple_repeat 5 72 0 342 255 0 0 chr20 71711088 71711241 -442641 + (CA)n Simple_repeat Simple_repeat 1 153 0 217 211 0 21 chr20 71711266 71711361 -442521 + (CA)n Simple_repeat Simple_repeat 1 93 0 429 228 173 24 chr20 71711405 71711532 -442350 - MER69 DNA AcHobo 0 2526 2381 248 218 0 0 chr20 71711668 71711723 -442159 - MER69 DNA AcHobo -1171 55 1 973 254 65 70 chr20 71711859 71712470 -441412 + L1MC5 LINE L1 7322 7929 -32 21 36 0 0 chr20 71713509 71713537 -440345 + AT_rich Low_complexity Low_complexity 1 28 0 474 308 139 57 chr20 71713647 71714185 -439697 - L1ME1 LINE L1 -259 5890 5462 1996 191 62 25 chr20 71714185 71714672 -439210 + MLT1D LTR MaLR 1 505 0 474 308 139 57 chr20 71714672 71714746 -439136 - L1ME1 LINE L1 -687 5462 5395 465 232 145 34 chr20 71714761 71715212 -438670 - L1ME1 LINE L1 -751 5378 4860 394 281 48 0 chr20 71715277 71715423 -438459 - L1ME1 LINE L1 -1445 4684 4532 276 242 15 83 chr20 71715431 71715563 -438319 + L2 LINE L2 2052 2174 -1140 718 213 119 0 chr20 71715571 71715731 -438151 - MER5A DNA MER1_type -4 185 7 258 198 81 93 chr20 71715756 71715842 -438040 + L2 LINE L2 2208 2292 -1022 1133 277 68 53 chr20 71715890 71716575 -437307 + L2 LINE L2 2463 3163 -150 328 286 80 28 chr20 71716654 71717042 -436840 - L1ME1 LINE L1 -1596 4533 4126 480 288 105 7 chr20 71717123 71717276 -436606 - MER5B DNA MER1_type -9 169 2 343 271 33 20 chr20 71717353 71717504 -436378 - L1ME1 LINE L1 -5947 172 20 560 284 6 11 chr20 71717628 71717804 -436078 + MER5B DNA MER1_type 1 175 -3 233 280 32 21 chr20 71717823 71717916 -435966 + MER5B DNA MER1_type 77 170 -8 191 150 0 0 chr20 71718090 71718130 -435752 - L2 LINE L2 -1 3312 3273 325 275 94 27 chr20 71718627 71718776 -435106 - MIR3 SINE MIR -2 206 48 181 375 61 38 chr20 71719595 71719859 -434023 - L2 LINE L2 -25 3247 2978 302 315 87 22 chr20 71720640 71720824 -433058 - MER102a DNA MER1_type -10 320 125 629 229 52 0 chr20 71720839 71720992 -432890 - LTR67 LTR ERVL -2 555 395 210 292 22 67 chr20 71721868 71721957 -431925 + L2 LINE L2 3188 3272 0 209 333 49 41 chr20 71722833 71722956 -430926 - L2 LINE L2 -4 3268 3145 790 184 53 37 chr20 71723432 71723622 -430260 - L1ME2 LINE L1 -21 6143 5951 614 250 78 10 chr20 71723614 71723806 -430076 - L1ME2 LINE L1 -460 5704 5500 * 1156 246 103 33 chr20 71723919 71724113 -429769 - MER113 DNA MER1_type? 0 521 342 830 142 21 0 chr20 71724113 71724254 -429628 - L1MD2 LINE L1 -1 6358 6215 1156 246 103 33 chr20 71724254 71724546 -429336 - MER113 DNA MER1_type? -179 342 1 247 250 31 62 chr20 71724657 71724753 -429129 - L2 LINE L2 0 3313 3221 408 331 98 11 chr20 71724792 71725148 -428734 - L2 LINE L2 0 3313 2927 1782 208 76 14 chr20 71725454 71725887 -427995 + MLT1C LTR MaLR 8 467 0 982 239 56 10 chr20 71726261 71726732 -427150 + MLT1F1 LTR MaLR 1 558 -9 285 167 26 39 chr20 71726846 71726924 -426958 + (TTCA)n Simple_repeat Simple_repeat 4 80 0 353 295 84 0 chr20 71726925 71727020 -426862 - L2 LINE L2 -32 3240 3138 379 295 152 79 chr20 71727077 71727446 -426436 - L2 LINE L2 -5 3267 2872 977 158 99 15 chr20 71727614 71727816 -426066 - MER20 DNA MER1_type 0 219 1 2467 71 0 0 chr20 71728324 71728635 -425247 + AluY SINE Alu 1 311 0 271 271 133 36 chr20 71728820 71728986 -424896 + MIR3 SINE MIR 20 201 -7 185 83 28 0 chr20 71729679 71729715 -424167 + (CA)n Simple_repeat Simple_repeat 1 37 0 264 197 13 26 chr20 71729722 71729798 -424084 + (CATA)n Simple_repeat Simple_repeat 4 78 0 238 200 34 11 chr20 71729843 71730018 -423864 + (CA)n Simple_repeat Simple_repeat 2 180 0 213 217 39 13 chr20 71730082 71730315 -423567 + (CA)n Simple_repeat Simple_repeat 1 239 0 244 342 33 25 chr20 71730323 71730443 -423439 + L2 LINE L2 2938 3058 -255 217 171 0 0 chr20 71730622 71730663 -423219 + L2 LINE L2 3273 3313 0 351 316 101 28 chr20 71731108 71731326 -422556 - MIR SINE MIR 0 262 29 24 32 0 0 chr20 71733194 71733225 -420657 + AT_rich Low_complexity Low_complexity 1 31 0 255 243 43 0 chr20 71733241 71733311 -420571 - MIR SINE MIR -11 251 179 533 286 87 28 chr20 71733405 71733692 -420190 + LTR16A LTR ERVL 56 359 -91 181 79 0 53 chr20 71733692 71733730 -420152 + (TCC)n Simple_repeat Simple_repeat 2 37 0 462 211 11 23 chr20 71733747 71733922 -419960 + CT-rich Low_complexity Low_complexity 2 174 0 28 48 0 0 chr20 71733990 71734032 -419850 + AT_rich Low_complexity Low_complexity 1 42 0 215 313 0 17 chr20 71734255 71734369 -419513 - MIR SINE MIR -107 101 7 296 228 150 94 chr20 71735855 71735982 -417900 - L2 LINE L2 -13 3300 3167 529 327 140 12 chr20 71736520 71736856 -417026 - MLT1K LTR MaLR -128 460 82 656 98 22 0 chr20 71736903 71736995 -416887 - LTR12 LTR ERV1 -131 583 490 328 172 61 20 chr20 71736995 71737094 -416788 - LTR30 LTR ERV1 -67 655 553 992 156 36 104 chr20 71737095 71737345 -416537 - LTR12 LTR ERV1 -429 285 53 267 231 0 0 chr20 71737345 71737397 -416485 - LTR30 LTR ERV1 -670 52 1 268 296 37 0 chr20 71738191 71738272 -415610 + MLT1K LTR MaLR 82 165 -423 204 294 29 15 chr20 71738397 71738465 -415417 - MIR SINE MIR -95 113 45 1102 167 16 21 chr20 71738588 71738780 -415102 - MLT1D LTR MaLR 0 505 315 703 100 53 11 chr20 71738781 71738974 -414908 + CT-rich Low_complexity Low_complexity 1 201 0 1103 202 95 41 chr20 71738974 71739291 -414591 - MLT1D LTR MaLR -171 334 1 26 64 0 0 chr20 71739998 71740045 -413837 + AT_rich Low_complexity Low_complexity 1 47 0 313 326 175 21 chr20 71740692 71741017 -412865 - L2 LINE L2 -2 3270 2896 1722 245 72 19 chr20 71741157 71741699 -412183 - L1ME1 LINE L1 -23 6143 5573 181 317 177 43 chr20 71741700 71742186 -411696 - L2 LINE L2 -567 2747 2197 646 240 84 0 chr20 71743318 71743472 -410410 + MER45A DNA AcHobo 10 176 -2 2095 231 15 13 chr20 71743550 71744009 -409873 + MLT1C LTR MaLR 6 465 -2 2774 13 0 0 chr20 71745357 71745668 -408214 - AluYa5 SINE Alu 0 311 1 5884 185 52 20 chr20 71746007 71746568 -407314 + L1MC3 LINE L1 5449 5990 -1795 1934 119 44 0 chr20 71746568 71746862 -407020 - AluSc SINE Alu 0 309 3 5884 185 52 20 chr20 71746862 71747566 -406316 + L1MC3 LINE L1 5990 6755 -1030 185 333 118 22 chr20 71748055 71748190 -405692 - L2 LINE L2 -28 3244 3097 931 276 43 38 chr20 71748379 71748749 -405133 + MLT1K LTR MaLR 164 535 -53 190 271 14 43 chr20 71749245 71749315 -404567 + L2 LINE L2 3141 3208 -64 591 203 16 16 chr20 71749914 71750042 -403840 + MIR SINE MIR 116 243 -19 461 272 92 30 chr20 71750296 71750499 -403383 + L1MC4a LINE L1 5695 5911 -210 2257 175 10 3 chr20 71752278 71752661 -401221 + MLT1B LTR MaLR 4 389 -1 2172 130 148 13 chr20 71752888 71753265 -400617 + MSTA LTR MaLR 1 428 0 4071 125 18 59 chr20 71755294 71755956 -397926 - MER41B LTR ERV1 0 635 1 1492 118 19 74 chr20 71756069 71756340 -397542 - MER4D LTR ERV1 0 903 648 1973 178 85 33 chr20 71756341 71756801 -397081 + LTR2B LTR ERV1 7 490 0 4410 120 9 8 chr20 71756801 71757451 -396431 - MER4D LTR ERV1 -252 651 1 345 319 35 60 chr20 71758449 71758681 -395201 + MIR SINE MIR 2 227 -35 239 282 14 0 chr20 71758992 71759063 -394819 + (TA)n Simple_repeat Simple_repeat 2 73 0 1507 225 109 64 chr20 71759163 71759696 -394186 - MLT1F1 LTR MaLR 0 567 11 444 309 69 45 chr20 71760123 71760414 -393468 + L2 LINE L2 2928 3225 -88 615 278 34 94 chr20 71762786 71763138 -390744 + L2 LINE L2 2940 3270 -43 420 299 43 16 chr20 71764321 71764508 -389374 - MIR SINE MIR -22 240 49 643 233 63 16 chr20 71764944 71765133 -388749 - MER20 DNA MER1_type 0 219 22 30 0 0 0 chr20 71765471 71765501 -388381 + AT_rich Low_complexity Low_complexity 1 30 0 461 179 0 0 chr20 71765501 71765585 -388297 - L1MA5 LINE L1 0 6300 6217 303 284 11 0 chr20 71767965 71768053 -385829 + MER103 DNA DNA 69 157 -9 578 226 21 54 chr20 71768587 71768773 -385109 + MIR SINE MIR 53 232 -30 10984 163 21 40 chr20 71770097 71771256 -382626 + Ricksha_c DNA DNA 9 1115 -2139 2197 126 0 3 chr20 71771256 71771558 -382324 + AluSq SINE Alu 1 301 -12 10984 163 21 40 chr20 71771558 71772461 -381421 + Ricksha_c DNA DNA 1115 2033 -13 701 225 59 6 chr20 71772349 71772518 -381364 - Ricksha DNA DNA -1867 179 2 * 615 131 23 39 chr20 71772770 71772900 -380982 - Ricksha DNA DNA -95 3159 3032 253 135 0 0 chr20 71773277 71773314 -380568 - MER5B DNA MER1_type -7 171 135 647 185 67 7 chr20 71773314 71773449 -380433 + L1MB8 LINE L1 6034 6176 -2 373 232 141 0 chr20 71773454 71773553 -380329 - MER5B DNA MER1_type -64 114 2 217 306 174 25 chr20 71774662 71774937 -378945 + L2 LINE L2 2175 2490 -824 323 291 39 31 chr20 71775214 71775341 -378541 + L2 LINE L2 3145 3272 0 234 324 35 42 chr20 71775327 71775469 -378413 + MIR SINE MIR 91 231 -31 * 738 150 108 0 chr20 71775515 71775635 -378247 + FRAM SINE Alu 21 153 -23 252 336 9 17 chr20 71775846 71775962 -377920 + MIR3 SINE MIR 61 175 -33 191 291 18 0 chr20 71777069 71777124 -376758 - L3 LINE CR1 -1117 460 405 2042 163 50 12 chr20 71777483 71777885 -375997 - MSTB LTR MaLR -2 410 8 643 115 0 0 chr20 71777872 71777968 -375914 - MSTB LTR MaLR -330 96 1 * 336 283 22 103 chr20 71777972 71778156 -375726 + MIR SINE MIR 85 253 -9 2455 72 0 3 chr20 71778509 71778814 -375068 - AluY SINE Alu -7 304 1 250 187 40 0 chr20 71780751 71780808 -373074 - MIR SINE MIR -62 146 95 192 317 48 67 chr20 71780931 71781035 -372847 + MIR SINE MIR 71 172 -90 180 393 22 0 chr20 71781534 71781623 -372259 - MIR SINE MIR -171 91 1 180 111 0 0 chr20 71782448 71782475 -371407 + (A)n Simple_repeat Simple_repeat 1 27 0 669 268 42 0 chr20 71783020 71783210 -370672 - MER20 DNA MER1_type -4 215 18 235 241 51 25 chr20 71783553 71783632 -370250 + L2 LINE L2 3189 3269 -3 983 180 67 48 chr20 71783775 71784091 -369791 - MER5C DNA MER1_type -2 322 1 312 211 0 0 chr20 71784363 71784415 -369467 - MER81 DNA DNA -58 56 5 1845 301 87 30 chr20 71784475 71785639 -368243 - L1MC4a LINE L1 -360 7448 6219 265 212 51 15 chr20 71785642 71785779 -368103 + (TA)n Simple_repeat Simple_repeat 2 143 0 410 269 119 0 chr20 71785991 71786125 -367757 - L1MC4a LINE L1 -1836 5972 5823 26 64 0 0 chr20 71786126 71786173 -367709 + AT_rich Low_complexity Low_complexity 1 47 0 5157 140 41 27 chr20 71786178 71787578 -366304 + L1PA15 LINE L1 4706 6125 -40 740 260 57 37 chr20 71787668 71787914 -365968 - L1MC4a LINE L1 -2002 5806 5556 2195 102 13 16 chr20 71788093 71788406 -365476 - AluSx SINE Alu 0 312 1 433 277 40 34 chr20 71788541 71788718 -365164 - MER5B DNA MER1_type 0 178 1 40 73 0 0 chr20 71789184 71789266 -364616 + AT_rich Low_complexity Low_complexity 1 82 0 25 31 0 0 chr20 71789322 71789354 -364528 + AT_rich Low_complexity Low_complexity 1 32 0 193 117 52 26 chr20 71789363 71789394 -364488 + (TATAA)n Simple_repeat Simple_repeat 2 31 -49 1866 92 59 15 chr20 71789394 71789667 -364215 + AluSg SINE Alu 1 285 -25 193 117 52 26 chr20 71789667 71789712 -364170 + (TATAA)n Simple_repeat Simple_repeat 31 80 0 22 0 0 0 chr20 71790302 71790324 -363558 + AT_rich Low_complexity Low_complexity 1 22 0 205 214 18 0 chr20 71790458 71790514 -363368 + (TA)n Simple_repeat Simple_repeat 1 57 0 567 285 47 45 chr20 71790528 71790889 -362993 + L1ME4a LINE L1 5501 5858 -263 484 271 193 0 chr20 71792298 71792464 -361418 - MIR SINE MIR -29 233 36 183 80 0 0 chr20 71793053 71793078 -360804 + (T)n Simple_repeat Simple_repeat 1 25 0 306 0 0 0 chr20 71793346 71793380 -360502 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 21630 27 0 0 chr20 71793380 71796561 -357321 - L1PA2 LINE L1 -16 6139 2959 1900 235 81 144 chr20 71797116 71797772 -356110 - L2 LINE L2 -533 2781 2086 476 220 102 0 chr20 71797772 71797890 -355992 - MER5B DNA MER1_type -48 130 1 1900 235 81 144 chr20 71797890 71798715 -355167 - L2 LINE L2 -1228 2086 1283 501 242 0 0 chr20 71798717 71798816 -355066 - MER5A DNA MER1_type 0 189 91 312 324 84 0 chr20 71798893 71799035 -354847 - L2 LINE L2 -2063 1251 1098 219 69 0 0 chr20 71799730 71799759 -354123 + (TG)n Simple_repeat Simple_repeat 2 30 0 318 222 0 111 chr20 71799759 71799858 -354024 - L1MC4 LINE L1 -1339 6703 6616 2185 97 7 0 chr20 71800812 71801112 -352770 - AluSx SINE Alu -10 302 1 311 272 123 53 chr20 71801759 71801873 -352009 - MIR SINE MIR -32 230 109 907 266 59 0 chr20 71802351 71802622 -351260 - L1MD3 LINE L1 0 7995 7709 2231 107 3 0 chr20 71802678 71802987 -350895 + AluSx SINE Alu 1 310 -2 383 239 122 54 chr20 71803008 71803116 -350766 - L1MCb LINE L1 -5827 595 496 2187 97 3 0 chr20 71803116 71803415 -350467 - AluSx SINE Alu -12 300 1 383 239 122 54 chr20 71803415 71803528 -350354 - L1MCb LINE L1 -5926 496 37 350 313 40 20 chr20 71803628 71803829 -350053 + L1ME4a LINE L1 5678 5882 -239 257 333 11 11 chr20 71804296 71804383 -349499 + MIR SINE MIR 14 100 -162 3498 179 65 26 chr20 71804386 71805088 -348794 - MER21B LTR ERV1 0 863 134 305 193 34 25 chr20 71805121 71805240 -348642 + (TA)n Simple_repeat Simple_repeat 1 120 0 256 18 55 36 chr20 71805261 71805316 -348566 + (TA)n Simple_repeat Simple_repeat 1 56 0 372 270 50 0 chr20 71805445 71805545 -348337 - MER21B LTR ERV1 -758 105 1 571 268 39 13 chr20 71805545 71805698 -348184 + MIR SINE MIR 95 251 -11 313 316 115 17 chr20 71806652 71806886 -346996 + MIR SINE MIR 6 262 0 1146 209 51 18 chr20 71807163 71807436 -346446 + AluJb SINE Alu 1 282 -30 227 143 0 0 chr20 71807485 71807520 -346362 - L2 LINE L2 -672 2642 2608 22 0 0 0 chr20 71809194 71809216 -344666 + AT_rich Low_complexity Low_complexity 1 22 0 1482 167 65 142 chr20 71809848 71810404 -343478 + MER67D LTR ERV1 1 513 -1 389 254 55 9 chr20 71810909 71811019 -342863 - MIR SINE MIR -108 154 40 1628 187 68 6 chr20 71813471 71813886 -339996 - MLT1D LTR MaLR -6 499 9 410 255 190 11 chr20 71814499 71814683 -339199 + L2 LINE L2 3097 3313 0 398 323 48 98 chr20 71814921 71815422 -338460 + HAL1b LINE L1 27 502 -846 1309 102 15 19 chr20 71815548 71815754 -338128 + AluSx SINE Alu 1 205 -107 332 320 31 62 chr20 71816436 71816540 -337342 + MIR SINE MIR 45 146 -62 1472 220 7 20 chr20 71816540 71816844 -337038 + AluJo SINE Alu 1 300 -2 332 320 31 62 chr20 71816844 71816867 -337015 + MIR SINE MIR 146 168 -40 1076 278 36 7 chr20 71817115 71817424 -336458 - MER77 LTR ERV1 -6 599 282 377 299 0 9 chr20 71817469 71817576 -336306 - MER77 LTR ERV1 -446 159 54 1033 212 30 4 chr20 71817837 71818068 -335814 - MER58B DNA MER1_type -1 340 104 1210 209 28 52 chr20 71818070 71818396 -335486 + L1MC2 LINE L1 6010 6327 -17 318 247 0 26 chr20 71818396 71818473 -335409 - MER58B DNA MER1_type -247 94 20 292 309 80 57 chr20 71819693 71819868 -334014 + MIR SINE MIR 7 185 -77 393 279 162 7 chr20 71822115 71822269 -331613 + MER5A DNA MER1_type 12 189 0 459 0 0 0 chr20 71825280 71825331 -328551 + (TG)n Simple_repeat Simple_repeat 2 52 0 673 205 38 54 chr20 71826194 71826379 -327503 - MER20 DNA MER1_type -4 215 34 1048 227 22 0 chr20 71826591 71826816 -327066 - MLT1D LTR MaLR -21 484 255 357 218 62 148 chr20 71827009 71827252 -326630 - MLT1E2 LTR MaLR -263 242 18 545 238 0 6 chr20 71827601 71827782 -326100 + (TG)n Simple_repeat Simple_repeat 1 180 0 603 211 7 10 chr20 71827804 71828110 -325772 + (TG)n Simple_repeat Simple_repeat 1 304 0 703 258 5 27 chr20 71829528 71829714 -324168 - MIR SINE MIR -36 226 45 473 167 0 69 chr20 71829729 71829831 -324051 + MER63 DNA MER1_type 32 752 -84 258 300 0 0 chr20 71829832 71829902 -323980 + MER63 DNA MER1_type 980 1049 -13 453 214 26 0 chr20 71831294 71831411 -322471 + L1MB7 LINE L1 6065 6184 0 1366 185 23 55 chr20 71831422 71831730 -322152 + AluJo SINE Alu 1 298 -14 221 56 0 28 chr20 71832310 71832346 -321536 + (CAA)n Simple_repeat Simple_repeat 2 36 0 268 170 22 185 chr20 71832515 71832650 -321232 + MLT1H LTR MaLR 434 546 -3 2258 222 58 22 chr20 71833340 71833966 -319916 - L1MC4a LINE L1 -1 7807 7160 258 339 100 8 chr20 71836047 71836177 -317705 + MIR SINE MIR 92 233 -29 285 226 38 0 chr20 71836470 71836523 -317359 - MER115 DNA AcHobo -636 57 3 1711 170 7 0 chr20 71837698 71838002 -315880 + AluJb SINE Alu 4 309 0 730 263 80 47 chr20 71838021 71838331 -315551 + MLT2C1 LTR ERVL 20 345 -52 622 85 28 0 chr20 71838331 71838437 -315445 + (TAGA)n Simple_repeat Simple_repeat 2 110 0 730 263 80 47 chr20 71838437 71838491 -315391 + MLT2C1 LTR ERVL 345 396 -1 207 186 0 0 chr20 71838694 71838737 -315145 + (TA)n Simple_repeat Simple_repeat 1 43 0 263 312 110 0 chr20 71839554 71839663 -314219 - MER103 DNA DNA -44 122 2 211 338 113 33 chr20 71840976 71841127 -312755 - L2 LINE L2 -14 3299 3137 550 209 63 73 chr20 71841251 71841442 -312440 + MLT1K LTR MaLR 128 316 -272 399 182 26 0 chr20 71841525 71841602 -312280 + MER96 DNA MER1_type? 97 175 0 333 272 0 95 chr20 71841617 71841764 -312118 + MLT1K LTR MaLR 345 477 -111 290 248 15 102 chr20 71842176 71842313 -311569 + MLT1K LTR MaLR 455 579 -9 204 289 121 0 chr20 71842354 71842437 -311445 + L2 LINE L2 3150 3242 -30 239 128 0 0 chr20 71842739 71842778 -311104 - MSTA LTR MaLR 0 428 390 726 195 312 0 chr20 71842779 71842984 -310898 - L1 LINE L1 -1095 5051 4783 1265 108 12 3 chr20 71842999 71843201 -310681 + L1PA8A LINE L1 5617 5817 -314 314 275 0 44 chr20 71843244 71843335 -310547 - L1MC4 LINE L1 -1342 6700 6614 2685 90 3 0 chr20 71843343 71843711 -310171 + L1PB1 LINE L1 5783 6151 0 1997 148 0 0 chr20 71843731 71844041 -309841 + AluSx SINE Alu 1 310 -2 375 121 0 0 chr20 71844041 71844099 -309783 + (GGAAA)n Simple_repeat Simple_repeat 2 59 0 1143 65 6 12 chr20 71844121 71844289 -309593 + (GAAA)n Simple_repeat Simple_repeat 2 168 0 2011 152 73 5 chr20 71844290 71844658 -309224 - MSTA LTR MaLR -35 393 1 666 241 72 58 chr20 71844752 71845199 -308683 + MLT1E1 LTR MaLR 136 647 -7 207 0 0 0 chr20 71846074 71846097 -307785 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1015 243 31 8 chr20 71846474 71846729 -307153 + MIR SINE MIR 2 262 0 413 205 71 9 chr20 71847977 71848089 -305793 + MER20 DNA MER1_type 100 218 -1 1690 150 19 0 chr20 71848140 71848407 -305475 - AluSx SINE Alu -38 274 3 318 276 49 86 chr20 71849219 71849382 -304500 - MIR SINE MIR -77 185 29 429 251 141 42 chr20 71849402 71849593 -304289 + MIR SINE MIR 31 240 -22 851 140 9 23 chr20 71850535 71850834 -303048 - MER4B LTR ERV1 0 610 261 566 125 31 10 chr20 71850834 71850930 -302952 - MER4A LTR ERV1 -566 98 1 361 344 32 0 chr20 71852083 71852208 -301674 + MIR SINE MIR 69 197 -65 229 330 170 0 chr20 71853012 71853124 -300758 - MIR SINE MIR -58 150 20 1013 228 18 40 chr20 71853268 71853492 -300390 - MER20 DNA MER1_type 0 219 1 262 211 35 0 chr20 71854987 71855044 -298838 + MIR SINE MIR 66 124 -138 448 318 49 7 chr20 71855282 71855590 -298292 - L1M4 LINE L1 -3615 2531 2211 23 0 0 0 chr20 71855874 71855897 -297985 + AT_rich Low_complexity Low_complexity 1 23 0 347 289 94 37 chr20 71856040 71856521 -297361 + HAL1 LINE L1 1161 1668 -839 346 272 54 0 chr20 71856942 71857034 -296848 + MER58B DNA MER1_type 245 341 0 931 88 0 0 chr20 71857384 71857497 -296385 + AluSp SINE Alu 1 113 -200 2643 61 0 0 chr20 71857497 71857808 -296074 - L1PA8 LINE L1 -14 6158 5848 204 373 34 17 chr20 71857986 71858104 -295778 + L2 LINE L2 3150 3269 -3 3581 189 53 4 chr20 71859082 71859766 -294116 - L1MD1 LINE L1 -1 6241 5525 194 216 78 39 chr20 71861126 71861177 -292705 + MIR SINE MIR 43 95 -167 2245 127 3 0 chr20 71861190 71861498 -292384 - AluSq SINE Alu -4 309 1 262 304 132 43 chr20 71861759 71862039 -291843 - L2 LINE L2 -1 3312 3008 21 0 0 0 chr20 71863256 71863277 -290605 + AT_rich Low_complexity Low_complexity 1 21 0 208 281 78 0 chr20 71863578 71863642 -290240 + MIR SINE MIR 160 228 -34 1920 98 0 4 chr20 71864678 71864933 -288949 + AluSq SINE Alu 1 254 -59 236 195 0 0 chr20 71865975 71866016 -287866 + CT-rich Low_complexity Low_complexity 1 41 0 421 269 116 68 chr20 71866506 71866919 -286963 - L1MC/D LINE L1 -2050 5758 5326 329 300 67 77 chr20 71867507 71867820 -286062 - L1MC/D LINE L1 -2128 4018 3709 517 175 0 39 chr20 71867873 71867976 -285906 - FLAM_C SINE Alu 0 143 45 2052 126 0 7 chr20 71868062 71868399 -285483 + AluSq SINE Alu 1 335 0 431 262 49 8 chr20 71869444 71869566 -284316 + MLT1C LTR MaLR 28 154 -351 2215 95 16 9 chr20 71869570 71869969 -283913 - LTR7 LTR ERV1 -2 448 1 1397 210 48 93 chr20 71870002 71870585 -283297 - LTR24B LTR ERV1 -7 569 1 715 247 141 11 chr20 71870594 71870857 -283025 + MLT1C LTR MaLR 171 467 0 182 239 65 0 chr20 71871942 71871988 -281894 - L2 LINE L2 0 3313 3265 254 348 51 0 chr20 71872011 71872129 -281753 - MIR SINE MIR -23 239 116 782 215 38 21 chr20 71872690 71872876 -281006 + MER5A DNA MER1_type 1 189 0 319 271 127 75 chr20 71872883 71873144 -280738 + LTR16A1 LTR ERVL 7 300 -157 4291 148 29 35 chr20 71873144 71873876 -280006 - LTR8A LTR ERV1 0 727 1 319 271 127 75 chr20 71873876 71874039 -279843 + LTR16A1 LTR ERVL 300 453 -4 2908 132 29 20 chr20 71874211 71874795 -279087 - MER4B LTR ERV1 0 779 1 2273 112 0 0 chr20 71875755 71876050 -277832 - AluSx SINE Alu -17 295 1 1757 191 154 48 chr20 71876783 71877244 -276638 - MER67D LTR ERV1 -4 510 1 300 167 53 105 chr20 71879395 71879461 -274421 - L1MC3 LINE L1 0 7785 7726 2536 142 38 24 chr20 71879461 71879883 -273999 + MSTA LTR MaLR 1 428 0 300 167 53 105 chr20 71879883 71879930 -273952 - L1MC3 LINE L1 -59 7726 7678 * 3971 264 113 16 chr20 71879928 71880613 -273269 - L1MB8 LINE L1 -2 6176 5559 1254 56 6 11 chr20 71880613 71880791 -273091 + (TTTC)n Simple_repeat Simple_repeat 2 178 0 2163 96 0 14 chr20 71880791 71881082 -272800 - AluY SINE Alu -24 287 1 3971 264 113 16 chr20 71881082 71881916 -271966 - L1MB8 LINE L1 -619 5559 4807 1681 184 26 37 chr20 71881916 71882264 -271618 + MER2 DNA MER2_type 1 344 0 3971 264 113 16 chr20 71882264 71882846 -271036 - L1MB8 LINE L1 -1371 4807 3857 772 168 30 0 chr20 71882847 71882978 -270904 - FRAM SINE Alu -16 160 26 3776 225 42 23 chr20 71882978 71883943 -269939 - L1MC3 LINE L1 -816 6969 5987 765 292 23 4 chr20 71883952 71884209 -269673 - L1M4 LINE L1 -1432 5509 5248 * 2041 241 51 17 chr20 71884180 71884887 -268995 - L1MEc LINE L1 -2958 3983 3253 14738 124 49 24 chr20 71884893 71884949 -268933 + Tigger1 DNA MER2_type 1 54 -2364 2329 92 0 0 chr20 71884949 71885268 -268614 - AluSg1 SINE Alu 0 309 1 14738 124 49 24 chr20 71885268 71885712 -268170 + Tigger1 DNA MER2_type 54 485 -1933 8170 20 6 0 chr20 71885712 71886651 -267231 + L1PA3 LINE L1 5212 6155 0 14738 124 49 24 chr20 71886651 71887433 -266449 + Tigger1 DNA MER2_type 485 1246 -1172 2408 72 0 10 chr20 71887433 71887738 -266144 + AluSg1 SINE Alu 1 302 -7 14738 124 49 24 chr20 71887738 71888812 -265070 + Tigger1 DNA MER2_type 1246 2418 0 2011 255 48 64 chr20 71888812 71890534 -263348 - L1MEc LINE L1 -3693 3249 1375 354 80 0 0 chr20 71892248 71892298 -261584 + (CA)n Simple_repeat Simple_repeat 1 50 0 386 252 52 26 chr20 71892298 71892413 -261469 + L1MC4 LINE L1 6705 6822 -1220 1045 126 0 0 chr20 71892505 71892656 -261226 - AluJb SINE Alu -5 307 157 321 208 0 0 chr20 71892657 71892734 -261148 + (TG)n Simple_repeat Simple_repeat 2 78 0 785 162 0 59 chr20 71892752 71892888 -260994 - FLAM_C SINE Alu -5 128 1 384 278 128 11 chr20 71893221 71893408 -260474 + LTR16A LTR ERVL 241 449 -1 314 303 22 37 chr20 71893979 71894158 -259724 + L1MC5 LINE L1 7095 7233 -728 826 335 115 8 chr20 71894455 71894975 -258907 + MLT1K LTR MaLR 9 584 -4 27 0 0 0 chr20 71895060 71895087 -258795 + AT_rich Low_complexity Low_complexity 1 27 0 523 286 192 16 chr20 71895487 71895763 -258119 - L1MC/D LINE L1 -592 5572 5304 240 59 0 0 chr20 71895772 71895806 -258076 + (CA)n Simple_repeat Simple_repeat 2 35 0 1971 185 12 61 chr20 71895964 71896374 -257508 + MLT1B LTR MaLR 1 390 0 233 308 15 0 chr20 71897714 71897779 -256103 + L2 LINE L2 3189 3254 -18 415 278 75 65 chr20 71898617 71899194 -254688 + L1MEc LINE L1 1248 2028 -4579 2208 114 0 3 chr20 71899248 71899546 -254336 + AluSq SINE Alu 1 297 -16 23 0 0 0 chr20 71899540 71899563 -254319 + AT_rich Low_complexity Low_complexity 1 23 0 531 345 49 4 chr20 71899640 71899907 -253975 - L1MEc LINE L1 -5981 1141 863 535 298 44 0 chr20 71900049 71900254 -253628 + L1ME3A LINE L1 804 1017 -5379 1003 277 62 37 chr20 71900273 71901057 -252825 + L1ME3A LINE L1 4849 5648 -583 227 175 0 70 chr20 71901132 71901189 -252693 + L1ME3A LINE L1 5877 5929 -306 2387 92 0 13 chr20 71901203 71901518 -252364 + AluY SINE Alu 1 311 0 351 244 44 8 chr20 71901714 71901861 -252021 + L1ME3A LINE L1 6056 6211 -22 516 72 0 0 chr20 71902123 71902192 -251690 + (GGAGA)n Simple_repeat Simple_repeat 1 69 0 443 83 31 42 chr20 71902176 71902272 -251610 + (GGAA)n Simple_repeat Simple_repeat 2 96 0 * 318 339 107 23 chr20 71902977 71903508 -250374 + L2 LINE L2 2149 2724 -590 415 293 177 56 chr20 71903898 71904328 -249554 - L2 LINE L2 0 3313 2832 1621 264 49 34 chr20 71904357 71905031 -248851 - L1MEc LINE L1 -4300 2822 2139 21 0 0 0 chr20 71905039 71905060 -248822 + AT_rich Low_complexity Low_complexity 1 21 0 1470 251 102 2 chr20 71905124 71905566 -248316 - L1MEc LINE L1 -5121 1302 817 556 309 108 5 chr20 71905684 71905907 -247975 - L1MEc LINE L1 -5829 594 349 643 261 60 26 chr20 71905919 71906187 -247695 - L1MEc LINE L1 -6109 314 38 281 319 223 30 chr20 71906318 71906823 -247059 + L2 LINE L2 2658 3262 -51 1018 221 37 9 chr20 71907113 71907330 -246552 - MER58A DNA MER1_type -1 223 1 * 2284 135 6 0 chr20 71907330 71907648 -246234 + MER1B DNA MER1_type 20 339 0 246 316 68 0 chr20 71907841 71907958 -245924 - MIR SINE MIR -14 248 124 2172 83 49 0 chr20 71907992 71908280 -245602 - AluSp SINE Alu -7 306 5 373 198 40 30 chr20 71911784 71911885 -241997 + MER5A DNA MER1_type 4 105 -84 300 304 17 35 chr20 71912237 71912352 -241530 + MER5B DNA MER1_type 40 152 -26 270 179 0 0 chr20 71912533 71912589 -241293 + (TG)n Simple_repeat Simple_repeat 2 57 0 21 0 0 0 chr20 71912814 71912835 -241047 + AT_rich Low_complexity Low_complexity 1 21 0 1606 292 97 24 chr20 71914334 71914853 -239029 - L1ME3A LINE L1 -5 6165 5685 2488 125 120 5 chr20 71914853 71915237 -238645 + MSTA LTR MaLR 1 428 0 1606 292 97 24 chr20 71915237 71915772 -238110 - L1ME3A LINE L1 -485 5685 5032 2415 229 105 45 chr20 71915854 71916158 -237724 - L1ME1 LINE L1 -5 6161 5877 1804 113 0 0 chr20 71916158 71916398 -237484 + AluSx SINE Alu 37 276 -36 2415 229 105 45 chr20 71916398 71916409 -237473 - L1ME1 LINE L1 -289 5877 5868 287 24 0 24 chr20 71916409 71916450 -237432 + (TAAA)n Simple_repeat Simple_repeat 1 40 0 2415 229 105 45 chr20 71916450 71917453 -236429 - L1ME1 LINE L1 -298 5868 4762 * 3670 212 66 24 chr20 71917451 71918936 -234946 - L1MB7 LINE L1 -2 6251 4706 1711 268 39 57 chr20 71918937 71920225 -233657 - L1MB7 LINE L1 -3473 2742 1535 2212 254 58 18 chr20 71920233 71920906 -232976 + L1MDa LINE L1 697 1396 -5144 6847 133 70 24 chr20 71920908 71921290 -232592 + Tigger3b DNA MER2_type 1 364 -2664 4689 38 2 2 chr20 71921290 71921823 -232059 + L1PA4 LINE L1 5620 6152 -3 6847 133 70 24 chr20 71921823 71922010 -231872 + Tigger3b DNA MER2_type 364 541 -2487 231 103 0 0 chr20 71922010 71922049 -231833 + (TAAAA)n Simple_repeat Simple_repeat 2 40 0 6847 133 70 24 chr20 71922049 71922655 -231227 + Tigger3b DNA MER2_type 541 1231 0 422 137 50 181 chr20 71922656 71922838 -231044 + L1MDa LINE L1 1399 1556 -4987 776 289 64 73 chr20 71923073 71923541 -230341 - L1MEd LINE L1 -4893 1226 766 2072 147 134 13 chr20 71923541 71923921 -229961 - MSTA LTR MaLR -2 426 1 776 289 64 73 chr20 71923921 71924245 -229637 - L1MEd LINE L1 -5353 766 441 364 305 150 53 chr20 71924737 71925130 -228752 + L2 LINE L2 2883 3313 0 240 253 38 13 chr20 71925573 71925652 -228230 - MLT1K LTR MaLR -38 550 470 508 305 215 36 chr20 71926208 71927006 -226876 - L2 LINE L2 -5 3308 2358 22 0 0 0 chr20 71928664 71928686 -225196 + AT_rich Low_complexity Low_complexity 1 22 0 661 261 41 67 chr20 71929287 71929601 -224281 + MER113 DNA MER1_type? 77 382 -139 348 308 46 8 chr20 71929710 71929840 -224042 - MIR3 SINE MIR -8 200 66 2173 110 3 3 chr20 71932191 71932482 -221400 + AluSc SINE Alu 1 291 -18 22 0 0 0 chr20 71932961 71932983 -220899 + AT_rich Low_complexity Low_complexity 1 22 0 2495 60 0 3 chr20 71933175 71933475 -220407 - AluY SINE Alu -12 299 1 256 128 64 0 chr20 71934811 71934858 -219024 - L1MA8 LINE L1 -25 6266 6217 4447 181 43 30 chr20 71934887 71935338 -218544 - L1MA9 LINE L1 -73 6239 5795 183 80 0 0 chr20 71935338 71935363 -218519 + (CA)n Simple_repeat Simple_repeat 2 26 0 4447 181 43 30 chr20 71935363 71936016 -217866 - L1MA9 LINE L1 -517 5795 5121 4364 171 14 91 chr20 71936019 71937083 -216799 + L1MA9 LINE L1 4118 5099 -1047 1596 245 103 25 chr20 71937371 71937856 -216026 - MLT1F LTR MaLR -11 531 9 282 282 153 70 chr20 71938268 71938555 -215327 + L2 LINE L2 3003 3313 0 443 266 58 87 chr20 71939258 71939671 -214211 - MLT1J LTR MaLR -2 509 109 337 236 57 38 chr20 71939903 71940009 -213873 - L2 LINE L2 0 3272 3165 234 0 0 0 chr20 71940462 71940488 -213394 + (TGAA)n Simple_repeat Simple_repeat 4 29 0 549 235 0 0 chr20 71941728 71941907 -211975 + (CA)n Simple_repeat Simple_repeat 1 179 0 222 255 0 0 chr20 71941932 71942026 -211856 + (CA)n Simple_repeat Simple_repeat 1 94 0 441 266 0 0 chr20 71942040 71942303 -211579 + (CA)n Simple_repeat Simple_repeat 1 263 0 216 242 0 0 chr20 71942342 71942437 -211445 + (CA)n Simple_repeat Simple_repeat 1 95 0 450 228 173 24 chr20 71942481 71942608 -211274 - MER69 DNA AcHobo 0 2526 2381 241 218 0 0 chr20 71942744 71942799 -211083 - MER69 DNA AcHobo -1171 55 1 982 250 65 70 chr20 71942935 71943546 -210336 + L1MC5 LINE L1 7322 7929 -32 21 36 0 0 chr20 71944586 71944614 -209268 + AT_rich Low_complexity Low_complexity 1 28 0 361 295 151 56 chr20 71944907 71945262 -208620 - L1ME1 LINE L1 -284 5865 5461 2157 193 60 23 chr20 71945262 71945749 -208133 + MLT1D LTR MaLR 1 505 0 361 295 151 56 chr20 71945749 71945823 -208059 - L1ME1 LINE L1 -688 5461 5395 488 248 191 40 chr20 71945838 71946289 -207593 - L1ME1 LINE L1 -751 5378 4860 401 281 48 0 chr20 71946354 71946500 -207382 - L1ME1 LINE L1 -1445 4684 4532 267 250 15 83 chr20 71946508 71946640 -207242 + L2 LINE L2 2052 2174 -1140 720 206 119 0 chr20 71946648 71946808 -207074 - MER5A DNA MER1_type -4 185 7 248 198 81 93 chr20 71946833 71946919 -206963 + L2 LINE L2 2208 2292 -1022 1113 277 68 53 chr20 71946967 71947652 -206230 + L2 LINE L2 2463 3163 -150 397 286 80 28 chr20 71947731 71948119 -205763 - L1ME1 LINE L1 -1596 4533 4126 475 288 105 7 chr20 71948200 71948353 -205529 - MER5B DNA MER1_type -9 169 2 355 257 36 21 chr20 71948430 71948570 -205312 - L1ME1 LINE L1 -5947 172 31 592 296 6 11 chr20 71948705 71948881 -205001 + MER5B DNA MER1_type 1 175 -3 218 280 32 21 chr20 71948900 71948993 -204889 + MER5B DNA MER1_type 77 170 -8 187 150 0 0 chr20 71949167 71949207 -204675 - L2 LINE L2 -1 3312 3273 306 282 94 27 chr20 71949704 71949853 -204029 - MIR3 SINE MIR -2 206 48 307 335 78 11 chr20 71951718 71951909 -201973 - MER102b DNA MER1_type -10 331 128 608 229 52 0 chr20 71951917 71952070 -201812 - LTR67 LTR ERVL -2 555 395 189 292 22 67 chr20 71952946 71953035 -200847 + L2 LINE L2 3188 3272 0 196 333 49 41 chr20 71953911 71954034 -199848 - L2 LINE L2 -4 3268 3145 742 194 55 35 chr20 71954466 71954667 -199215 - L1ME2 LINE L1 -9 6155 5951 600 266 73 5 chr20 71954659 71954851 -199031 - L1ME2 LINE L1 -460 5704 5500 * 1089 251 103 33 chr20 71954964 71955158 -198724 - MER113 DNA MER1_type? 0 521 342 761 149 21 0 chr20 71955158 71955299 -198583 - L1MD2 LINE L1 -1 6358 6215 1089 251 103 33 chr20 71955299 71955591 -198291 - MER113 DNA MER1_type? -179 342 1 225 250 31 62 chr20 71955702 71955798 -198084 - L2 LINE L2 0 3313 3221 393 345 93 6 chr20 71955837 71956193 -197689 - L2 LINE L2 0 3313 2927 1692 210 76 14 chr20 71956499 71956932 -196950 + MLT1C LTR MaLR 8 467 0 951 243 54 8 chr20 71957306 71957777 -196105 + MLT1F1 LTR MaLR 1 558 -9 285 167 26 39 chr20 71957891 71957969 -195913 + (TTCA)n Simple_repeat Simple_repeat 4 80 0 322 295 84 0 chr20 71957970 71958065 -195817 - L2 LINE L2 -32 3240 3138 331 297 39 31 chr20 71958122 71958250 -195632 - L2 LINE L2 -5 3267 3139 926 163 99 15 chr20 71958659 71958861 -195021 - MER20 DNA MER1_type 0 219 1 2412 107 0 0 chr20 71959369 71959677 -194205 + AluSg SINE Alu 1 308 -2 398 261 127 21 chr20 71959678 71959820 -194062 + L1MC4 LINE L1 7698 7854 -188 317 200 12 0 chr20 71959838 71959918 -193964 + L1MC4 LINE L1 7961 8041 -1 342 275 74 35 chr20 71963184 71963413 -190469 + MER102a DNA MER1_type 71 308 -22 492 276 15 0 chr20 71964641 71964775 -189107 + MIR SINE MIR 40 175 -87 595 159 63 24 chr20 71964781 71964907 -188975 + MER4B LTR ERV1 1 131 -479 2285 165 64 22 chr20 71964908 71965433 -188449 + MER4B LTR ERV1 63 779 0 182 222 22 0 chr20 71965443 71965488 -188394 + MIR SINE MIR 209 254 -8 366 250 9 19 chr20 71965488 71965596 -188286 + (ATGGTG)n Simple_repeat Simple_repeat 5 111 0 378 200 22 22 chr20 71965598 71965778 -188104 + (TGG)n Simple_repeat Simple_repeat 1 180 0 390 169 54 0 chr20 71965805 71965971 -187911 + (ATGGTG)n Simple_repeat Simple_repeat 2 176 0 409 165 41 12 chr20 71966001 71966171 -187711 + (ATGGTG)n Simple_repeat Simple_repeat 2 176 0 297 169 31 38 chr20 71966179 71966339 -187543 + (TGG)n Simple_repeat Simple_repeat 1 159 0 308 269 10 19 chr20 71966352 71966456 -187426 + (TGG)n Simple_repeat Simple_repeat 2 104 0 1766 175 3 7 chr20 71968167 71968464 -185418 + AluJo SINE Alu 1 296 -16 956 237 93 58 chr20 71968510 71968927 -184955 - MLT1C LTR MaLR 0 467 21 365 222 123 37 chr20 71968970 71969132 -184750 - L1MD2 LINE L1 -2 6357 6182 235 331 47 59 chr20 71969181 71969350 -184532 + MIR SINE MIR 73 239 -23 2260 118 3 9 chr20 71971989 71972304 -181578 + AluSq SINE Alu 1 313 0 890 249 100 80 chr20 71972712 71973161 -180721 - MLT1C LTR MaLR -2 465 8 356 77 0 9 chr20 71973208 71973268 -180614 - MLT2A1 LTR ERVL 0 444 396 357 287 87 17 chr20 71973281 71973396 -180486 + L1MC4 LINE L1 6583 6705 -1337 * 384 249 91 54 chr20 71973365 71973623 -180259 + L1MC4 LINE L1 1994 6983 -1339 348 234 29 101 chr20 71973624 71973869 -180013 + L1MC4 LINE L1 1995 6983 -1339 * 362 250 71 45 chr20 71973868 71973980 -179902 + L1MC4 LINE L1 6589 6703 -1339 342 274 48 0 chr20 71973984 71974068 -179814 + L1MC4 LINE L1 6614 6701 -1341 3033 94 0 0 chr20 71974070 71974472 -179410 - MLT2A1 LTR ERVL -42 402 1 663 350 63 31 chr20 71974752 71975341 -178541 - L1MEd LINE L1 -5010 1109 502 206 360 81 24 chr20 71975805 71976052 -177830 + L2 LINE L2 2804 3064 -208 201 341 35 0 chr20 71976869 71976954 -176928 + MIR SINE MIR 150 237 -25 28 0 0 0 chr20 71977255 71977283 -176599 + AT_rich Low_complexity Low_complexity 1 28 0 558 207 0 0 chr20 71977367 71977546 -176336 + (CA)n Simple_repeat Simple_repeat 2 180 0 372 210 0 32 chr20 71977570 71977756 -176126 + (CA)n Simple_repeat Simple_repeat 1 180 0 180 167 0 0 chr20 71977792 71977840 -176042 + (CA)n Simple_repeat Simple_repeat 1 48 0 211 300 22 11 chr20 71977998 71978088 -175794 + C-rich Low_complexity Low_complexity 4 94 0 275 313 39 8 chr20 71978703 71978831 -175051 - L1M LINE L1 -744 5426 5295 380 312 93 37 chr20 71979041 71979256 -174626 - L1ME LINE L1 -322 5799 5573 325 298 21 11 chr20 71979605 71979699 -174183 + L2 LINE L2 3174 3268 -4 666 250 40 0 chr20 71979843 71980019 -173863 + MER20 DNA MER1_type 37 219 0 512 283 46 83 chr20 71984602 71985037 -168845 - Charlie8 DNA MER1_type -1967 450 32 1805 176 7 0 chr20 71985693 71985983 -167899 + AluJb SINE Alu 1 292 -20 521 248 108 5 chr20 71985992 71986214 -167668 - Charlie7 DNA MER1_type -1874 738 494 602 182 44 77 chr20 71986223 71986404 -167478 + MER58A DNA MER1_type 37 211 -13 234 208 31 104 chr20 71987017 71987113 -166769 + HAL1 LINE L1 2416 2504 -3 1779 163 17 7 chr20 71987116 71987405 -166477 - AluJb SINE Alu -20 292 1 1362 229 43 16 chr20 71988582 71988957 -164925 - MLT2D LTR ERVL -6 408 24 2946 16 0 0 chr20 71989315 71989627 -164255 - AluYb8 SINE Alu -6 312 1 229 213 75 38 chr20 71989647 71989727 -164155 - L1MC5 LINE L1 -35 7926 7844 404 227 132 52 chr20 71990669 71990822 -163060 - MLT1I LTR MaLR -22 427 251 384 256 31 16 chr20 71991664 71991793 -162089 - MLT1K LTR MaLR -14 574 444 181 263 168 32 chr20 71992314 71992330 -161552 - MIR SINE MIR -62 200 188 1992 141 20 15 chr20 71992330 71992587 -161295 + MER2 DNA MER2_type 1 262 -82 2164 130 13 0 chr20 71992587 71992886 -160996 - AluSx SINE Alu -9 303 1 1992 141 20 15 chr20 71992886 71992969 -160913 + MER2 DNA MER2_type 262 343 -1 181 263 168 32 chr20 71992969 71993047 -160835 - MIR SINE MIR -74 188 93 823 273 28 36 chr20 71993076 71993391 -160491 + MLT1J LTR MaLR 28 420 -195 2194 117 0 3 chr20 71994964 71995255 -158627 + AluSc SINE Alu 1 290 -19 2440 50 46 0 chr20 71995893 71996175 -157707 - AluY SINE Alu -16 295 1 203 200 21 76 chr20 71996475 71996620 -157262 + (CTCTG)n Simple_repeat Simple_repeat 3 139 0 221 363 10 10 chr20 71997415 71997517 -156365 + L2 LINE L2 2959 3060 -253 933 290 27 37 chr20 71997702 71998109 -155773 + L1ME3 LINE L1 5550 5952 -210 601 272 72 15 chr20 71998109 71998507 -155375 - MLT1D LTR MaLR 0 467 1 315 295 44 44 chr20 71998527 71998710 -155172 + L1ME3 LINE L1 5980 6162 -2 271 339 63 23 chr20 72000042 72000263 -153619 - MIR SINE MIR -1 261 32 354 214 0 0 chr20 72000394 72000483 -153399 + (TCCA)n Simple_repeat Simple_repeat 2 90 0 528 218 12 6 chr20 72000563 72000733 -153149 + (TCCA)n Simple_repeat Simple_repeat 3 173 0 486 225 12 6 chr20 72000754 72000923 -152959 + (TCCA)n Simple_repeat Simple_repeat 3 172 0 236 200 15 0 chr20 72000944 72001009 -152873 + (TCCA)n Simple_repeat Simple_repeat 3 68 0 664 204 11 0 chr20 72001031 72001207 -152675 + (TCCA)n Simple_repeat Simple_repeat 3 180 0 408 163 0 0 chr20 72001269 72001312 -152570 + (TCCA)n Simple_repeat Simple_repeat 2 87 0 354 23 0 0 chr20 72001312 72001355 -152527 + (TCCA)n Simple_repeat Simple_repeat 2 44 0 674 244 72 0 chr20 72002455 72002648 -151234 - MER63A DNA MER1_type -3 207 1 500 296 61 43 chr20 72002911 72003141 -150741 - MLT1K LTR MaLR -315 273 40 299 263 39 0 chr20 72003601 72003711 -150171 + MIR SINE MIR 34 150 -58 1586 220 30 0 chr20 72004044 72004410 -149472 - MLT1B LTR MaLR -9 496 8 385 266 0 18 chr20 72005312 72005425 -148457 + MER5A DNA MER1_type 3 113 -76 303 248 98 15 chr20 72005462 72005595 -148287 - MER33 DNA MER1_type -8 316 173 1736 195 15 34 chr20 72005598 72005904 -147978 - L1MB3 LINE L1 -52 6131 5820 2025 158 0 0 chr20 72005904 72006195 -147687 - AluSx SINE Alu -21 291 1 2173 117 34 0 chr20 72006204 72006495 -147387 - AluSg SINE Alu -9 301 1 1736 195 15 34 chr20 72006495 72006718 -147164 - L1MB3 LINE L1 -371 5812 5442 386 264 12 60 chr20 72006739 72006906 -146976 - MER33 DNA MER1_type -112 212 54 331 157 36 36 chr20 72007427 72007567 -146315 + CT-rich Low_complexity Low_complexity 6 145 0 2563 60 0 13 chr20 72008391 72008706 -145176 - AluY SINE Alu 0 311 1 525 259 7 14 chr20 72008834 72008981 -144901 - MLT1C LTR MaLR -4 463 318 334 222 0 0 chr20 72008974 72009037 -144845 + AluJb SINE Alu 190 252 -50 * 372 222 77 26 chr20 72009047 72009164 -144718 - MLT1C LTR MaLR -156 311 189 609 340 17 0 chr20 72010718 72010956 -142926 + L1ME3A LINE L1 5560 5801 -369 427 294 32 37 chr20 72011575 72011762 -142120 + L1ME3A LINE L1 5852 6037 -133 269 149 27 40 chr20 72011780 72011854 -142028 + L1ME3A LINE L1 6090 6162 -8 565 269 46 75 chr20 72012010 72012342 -141540 + Charlie7 DNA MER1_type 320 643 -1969 2443 85 13 0 chr20 72012342 72012649 -141233 + AluSp SINE Alu 3 313 0 565 269 46 75 chr20 72012649 72012662 -141220 + Charlie7 DNA MER1_type 643 655 -1957 399 226 139 15 chr20 72013079 72013216 -140666 - MLT2E LTR ERVL -1 627 474 400 235 0 28 chr20 72014219 72014398 -139484 + (CA)n Simple_repeat Simple_repeat 1 174 0 309 281 7 14 chr20 72014424 72014713 -139169 + (CA)n Simple_repeat Simple_repeat 1 287 0 439 319 60 0 chr20 72018364 72018546 -135336 + L1ME LINE L1 5468 5660 -502 404 236 35 144 chr20 72018543 72018772 -135110 + L1ME3A LINE L1 5620 5823 -347 * 337 211 98 30 chr20 72018852 72018985 -134897 + L1ME3A LINE L1 6027 6168 -2 576 309 31 35 chr20 72019294 72019550 -134332 - MIR SINE MIR 0 262 8 1029 140 0 0 chr20 72019694 72019830 -134052 + (TGGA)n Simple_repeat Simple_repeat 1 314 0 1029 140 0 0 chr20 72019830 72020008 -133874 + (TGGA)n Simple_repeat Simple_repeat 1 178 0 401 290 29 0 chr20 72020166 72020304 -133578 - MER5A DNA MER1_type -32 157 16 2181 137 0 6 chr20 72021525 72021838 -132044 - AluJb SINE Alu -1 311 1 2229 267 49 34 chr20 72021858 72022713 -131169 - L1ME2 LINE L1 -42 6122 5255 191 128 51 0 chr20 72022744 72022783 -131099 + (TATG)n Simple_repeat Simple_repeat 2 42 0 1546 248 72 42 chr20 72022783 72023012 -130870 - L1ME2 LINE L1 -904 5242 5021 2439 99 0 0 chr20 72023012 72023316 -130566 - AluSx SINE Alu -8 304 1 1546 248 72 42 chr20 72023316 72023722 -130160 - L1ME2 LINE L1 -1125 5021 4588 227 279 90 9 chr20 72025401 72025512 -128370 - MIR SINE MIR -78 184 65 322 249 153 54 chr20 72026132 72026373 -127509 + L2 LINE L2 2848 3112 -160 1602 239 133 53 chr20 72026444 72027108 -126774 - MER21B LTR ERV1 -122 741 25 311 295 36 0 chr20 72027110 72027222 -126660 + L2 LINE L2 3179 3294 -19 445 330 87 0 chr20 72028077 72028283 -125599 - MER58A DNA MER1_type 0 224 1 436 295 33 74 chr20 72029708 72029925 -123957 - MLT1H1 LTR MaLR -305 290 39 249 264 139 0 chr20 72031431 72031560 -122322 - MIR3 SINE MIR -1 207 61 1684 210 22 0 chr20 72031663 72032020 -121862 + MLT1A1 LTR MaLR 1 365 0 614 261 22 71 chr20 72033023 72033249 -120633 - MER20 DNA MER1_type -4 215 1 308 174 11 0 chr20 72033939 72034031 -119851 + (TG)n Simple_repeat Simple_repeat 2 94 0 531 206 0 0 chr20 72034054 72034219 -119663 + (TG)n Simple_repeat Simple_repeat 2 166 0 357 205 0 0 chr20 72034240 72034357 -119525 + (TG)n Simple_repeat Simple_repeat 2 118 0 393 211 0 14 chr20 72034423 72034570 -119312 + (TG)n Simple_repeat Simple_repeat 2 146 0 516 216 0 0 chr20 72034607 72034852 -119030 + (TG)n Simple_repeat Simple_repeat 1 245 0 468 232 0 0 chr20 72034871 72035048 -118834 + (TG)n Simple_repeat Simple_repeat 2 178 0 549 235 0 0 chr20 72035085 72035396 -118486 + (TG)n Simple_repeat Simple_repeat 1 311 0 236 254 17 0 chr20 72035917 72035976 -117906 + C-rich Low_complexity Low_complexity 3 62 0 260 335 74 17 chr20 72036883 72037059 -116823 - L1ME LINE L1 -305 5816 5631 2065 113 0 60 chr20 72037532 72037862 -116020 - AluSx SINE Alu 0 312 1 180 0 0 0 chr20 72038013 72038033 -115849 + (T)n Simple_repeat Simple_repeat 1 20 0 223 132 0 0 chr20 72041797 72041835 -112047 + MIR SINE MIR 117 154 -108 233 307 13 0 chr20 72042049 72042124 -111758 + GA-rich Low_complexity Low_complexity 3 78 0 2642 84 14 3 chr20 72044125 72044496 -109386 + THE1C LTR MaLR 1 375 0 414 304 30 0 chr20 72044558 72044693 -109189 - L2 LINE L2 -20 3252 3114 2523 63 0 0 chr20 72044833 72045132 -108750 - AluY SINE Alu -12 299 1 751 85 92 0 chr20 72045344 72045474 -108408 - L1MB7 LINE L1 -9 6175 6034 310 152 51 38 chr20 72045474 72045553 -108329 - L1MD2 LINE L1 -229 6130 6051 844 313 130 23 chr20 72045553 72046161 -107721 - MER20B DNA MER1_type -110 673 1 496 194 6 6 chr20 72046263 72046423 -107459 + (TGGA)n Simple_repeat Simple_repeat 1 160 0 305 198 12 0 chr20 72046453 72046539 -107343 + (TGGA)n Simple_repeat Simple_repeat 2 88 0 620 231 26 70 chr20 72046753 72046982 -106900 + MER20 DNA MER1_type 1 219 0 447 182 15 57 chr20 72047826 72048108 -105774 + (ATGGTG)n Simple_repeat Simple_repeat 1 270 0 320 283 0 11 chr20 72048084 72048264 -105618 + (TGG)n Simple_repeat Simple_repeat 1 178 0 * 316 182 23 57 chr20 72048239 72048415 -105467 + (ATGGTG)n Simple_repeat Simple_repeat 1 170 0 * 317 296 11 0 chr20 72048416 72048504 -105378 + (TGG)n Simple_repeat Simple_repeat 1 89 0 520 193 0 33 chr20 72048505 72048686 -105196 + (ATGGTG)n Simple_repeat Simple_repeat 2 176 0 423 232 11 17 chr20 72048759 72048936 -104946 + (ATGGTG)n Simple_repeat Simple_repeat 4 179 0 271 270 0 14 chr20 72048936 72049010 -104872 + (ATG)n Simple_repeat Simple_repeat 3 75 0 403 278 11 0 chr20 72049015 72049191 -104691 + (TGG)n Simple_repeat Simple_repeat 3 180 0 304 185 0 0 chr20 72053191 72053245 -100637 - MER67D-int LTR ERV1 -4485 451 398 2227 137 28 14 chr20 72053323 72053682 -100200 + THE1B LTR MaLR 1 364 0 290 247 14 0 chr20 72053958 72054031 -99851 - MER67D-int LTR ERV1 -4846 90 17 661 214 166 0 chr20 72054082 72054269 -99613 - MER67D LTR ERV1 0 514 297 452 139 38 0 chr20 72054277 72054356 -99526 - MER67D LTR ERV1 -431 83 2 1575 192 0 23 chr20 72056965 72057272 -96610 + AluSx SINE Alu 1 300 -12 275 333 53 21 chr20 72057423 72057612 -96270 - MIR SINE MIR -2 260 66 507 138 0 12 chr20 72057883 72057963 -95919 + AluJ/FLAM SINE Alu 6 84 -228 1921 245 43 37 chr20 72058191 72058754 -95128 - MER77 LTR ERV1 -11 594 54 15129 160 26 10 chr20 72058809 72062767 -91115 - L1MA3 LINE L1 0 7724 3700 1740 100 0 15 chr20 72062770 72063040 -90842 - L1MA3 LINE L1 -4005 3560 3295 1238 260 49 3 chr20 72063429 72063794 -90088 + MER63 DNA MER1_type 673 1054 -6 429 179 0 0 chr20 72064128 72064251 -89631 + (CA)n Simple_repeat Simple_repeat 1 123 0 2144 94 3 44 chr20 72064551 72064869 -89013 - AluSx SINE Alu -7 305 1 278 117 26 39 chr20 72065849 72065926 -87956 + CT-rich Low_complexity Low_complexity 4 79 0 244 83 0 28 chr20 72065926 72065962 -87920 + Alu SINE Alu 180 214 -88 314 220 0 28 chr20 72065966 72066107 -87775 + CT-rich Low_complexity Low_complexity 6 142 0 203 176 0 0 chr20 72066775 72066809 -87073 + (TG)n Simple_repeat Simple_repeat 2 35 0 323 258 157 13 chr20 72066882 72067041 -86841 - MIR SINE MIR -59 203 22 571 302 33 56 chr20 72069199 72069593 -84289 - L1MEc LINE L1 -4593 1803 1419 2385 22 14 0 chr20 72069615 72069892 -83990 - L1PA4 LINE L1 -1 6154 5874 1302 13 0 13 chr20 72069892 72070045 -83837 + L1P2 LINE L1 5673 5823 -332 864 256 107 29 chr20 72070048 72070598 -83284 - L1MEc LINE L1 -4829 1386 839 425 284 162 13 chr20 72070617 72070846 -83036 - L1MEc LINE L1 -6091 305 43 623 254 42 55 chr20 72071556 72071773 -82109 + MER20 DNA MER1_type 6 219 0 237 309 53 0 chr20 72073085 72073179 -80703 + MLT1K LTR MaLR 137 235 -353 615 313 60 17 chr20 72073213 72073446 -80436 - MIR SINE MIR -17 245 3 25 0 0 0 chr20 72074077 72074102 -79780 + GC_rich Low_complexity Low_complexity 1 25 0 346 213 0 40 chr20 72074184 72074259 -79623 + MLT1H LTR MaLR 405 476 -73 1468 199 17 14 chr20 72077018 72077314 -76568 + AluJo SINE Alu 1 297 -15 1207 202 4 0 chr20 72077432 72077679 -76203 - L1M4 LINE L1 -1072 5074 4827 208 274 20 0 chr20 72079253 72079304 -74578 + MER5A DNA MER1_type 10 61 -128 319 49 0 0 chr20 72079729 72079770 -74112 + MADE1 DNA Mariner 1 41 -39 304 243 60 0 chr20 72079781 72079867 -74015 + L1ME LINE L1 5598 5701 -461 226 139 23 0 chr20 72079871 72079914 -73968 + MADE1 DNA Mariner 37 80 0 348 328 17 0 chr20 72080079 72080195 -73687 - MIR SINE MIR -50 212 95 275 319 38 44 chr20 72080276 72080436 -73446 - MER5A DNA MER1_type -22 167 9 786 264 140 31 chr20 72080494 72080829 -73053 + L1ME2 LINE L1 5595 5973 -191 2270 86 0 0 chr20 72080829 72081120 -72762 + AluSg SINE Alu 1 291 -19 786 264 140 31 chr20 72081120 72081140 -72742 + L1ME2 LINE L1 5973 5989 -175 363 273 8 8 chr20 72082068 72082200 -71682 + (TTG)n Simple_repeat Simple_repeat 3 134 0 201 255 0 0 chr20 72082202 72082300 -71582 + (TGG)n Simple_repeat Simple_repeat 1 98 0 238 282 0 0 chr20 72082300 72082384 -71498 + (TGG)n Simple_repeat Simple_repeat 1 84 0 225 273 0 0 chr20 72082400 72082528 -71354 + (TGG)n Simple_repeat Simple_repeat 1 128 0 569 252 0 0 chr20 72082565 72082972 -70910 + (TTG)n Simple_repeat Simple_repeat 1 407 0 514 298 63 57 chr20 72083023 72083339 -70543 - L2 LINE L2 -30 3283 2966 338 164 28 23 chr20 72085921 72086012 -67870 + Alu SINE Alu 248 300 -2 2201 115 0 0 chr20 72086031 72086335 -67547 + AluSx SINE Alu 1 304 -8 268 309 9 82 chr20 72086441 72086529 -67353 - L1MC4 LINE L1 -1 8041 7948 1873 131 7 14 chr20 72086529 72086826 -67056 + AluJb SINE Alu 1 295 -17 268 309 9 82 chr20 72086826 72086970 -66912 - L1MC4 LINE L1 -94 7948 7826 586 251 82 24 chr20 72086998 72087205 -66677 - L1ME2 LINE L1 -11 6153 5935 299 225 0 0 chr20 72087278 72087349 -66533 - L1ME2 LINE L1 -437 5727 5657 484 257 84 39 chr20 72087393 72087847 -66035 - L1MDa LINE L1 -3758 2782 2304 6345 36 0 0 chr20 72087890 72088630 -65252 + L1PA5 LINE L1 5415 6154 0 1291 130 74 9 chr20 72089070 72089286 -64596 + MER30 DNA MER1_type 1 230 0 185 320 29 10 chr20 72089659 72089762 -64120 + MIR SINE MIR 35 139 -69 1640 182 95 3 chr20 72098002 72098349 -55533 + L1MC3 LINE L1 7405 7783 -2 2196 161 40 31 chr20 72101141 72101563 -52319 - MSTB LTR MaLR 0 426 1 188 336 48 19 chr20 72103817 72103921 -49961 - MIR SINE MIR -47 215 109 4253 155 61 21 chr20 72104275 72104720 -49162 - LTR39 LTR ERV1 0 783 294 188 0 74 0 chr20 72104720 72104747 -49135 + (CCCCCA)n Simple_repeat Simple_repeat 2 30 0 4253 155 61 21 chr20 72104747 72105054 -48828 - LTR39 LTR ERV1 -489 294 1 243 235 0 15 chr20 72106233 72106301 -47581 + CT-rich Low_complexity Low_complexity 1 67 0 607 306 61 11 chr20 72107358 72107609 -46273 - L1ME3A LINE L1 0 6170 5902 1569 186 10 17 chr20 72107609 72107905 -45977 - AluJo SINE Alu -18 294 1 607 306 61 11 chr20 72107905 72107931 -45951 - L1ME3A LINE L1 -268 5902 5879 749 144 42 5 chr20 72108823 72109417 -44465 + (TCCA)n Simple_repeat Simple_repeat 1 615 0 202 312 65 0 chr20 72110574 72110651 -43231 + MIR SINE MIR 102 183 -79 613 309 62 5 chr20 72110738 72110948 -42934 + MIR SINE MIR 19 240 -22 230 262 33 0 chr20 72112024 72112085 -41797 - tRNA-Thr-ACT tRNA tRNA -2 75 13 380 208 29 46 chr20 72114820 72114899 -38983 + L1MD3 LINE L1 7673 7752 -236 1887 150 7 0 chr20 72114899 72115193 -38689 - AluJb SINE Alu -16 296 1 380 208 29 46 chr20 72115193 72115232 -38650 + L1MD3 LINE L1 7752 7986 -2 280 337 0 0 chr20 72116376 72116465 -37417 - MIR SINE MIR -93 169 81 1445 12 0 12 chr20 72116906 72117072 -36810 - L1PA3 LINE L1 0 6155 5992 237 265 49 10 chr20 72117494 72117596 -36286 - L1ME3A LINE L1 -5 6165 6060 2081 122 3 0 chr20 72117666 72117960 -35922 - AluSx SINE Alu -17 295 1 2088 116 0 3 chr20 72118504 72118796 -35086 + AluSx SINE Alu 1 291 -21 451 122 22 11 chr20 72118797 72118887 -34995 + G-rich Low_complexity Low_complexity 4 94 0 827 163 8 0 chr20 72118898 72119027 -34855 + FLAM_C SINE Alu 1 130 -3 917 174 0 0 chr20 72120243 72120415 -33467 - AluSg/x SINE Alu 0 305 134 2062 103 10 0 chr20 72120415 72120740 -33142 - AluSx SINE Alu 0 312 1 250 192 96 104 chr20 72121556 72121600 -32282 + MIR SINE MIR 108 151 -111 2279 101 0 3 chr20 72121600 72121906 -31976 + AluSx SINE Alu 1 305 -7 250 192 96 104 chr20 72121906 72121986 -31896 + MIR SINE MIR 151 231 -31 547 231 82 34 chr20 72123206 72123414 -30468 - MLT1E1 LTR MaLR -3 651 434 363 136 0 0 chr20 72125039 72125098 -28784 + (T)n Simple_repeat Simple_repeat 1 59 0 210 247 0 0 chr20 72125589 72125637 -28245 - MIR SINE MIR -115 147 101 566 211 30 0 chr20 72125973 72126106 -27776 - MER45A DNA AcHobo 0 178 42 205 118 39 20 chr20 72126849 72126900 -26982 + GA-rich Low_complexity Low_complexity 2 53 0 183 80 0 0 chr20 72127110 72127135 -26747 + (CATA)n Simple_repeat Simple_repeat 3 27 0 342 253 55 0 chr20 72127135 72127226 -26656 + MER20 DNA MER1_type 52 147 -72 1759 177 49 0 chr20 72129699 72130043 -23839 - MLT1B LTR MaLR 0 390 30 430 266 24 24 chr20 72132282 72132406 -21476 + MLT1I LTR MaLR 29 152 -257 395 256 47 18 chr20 72132471 72132630 -21252 + MLT1I LTR MaLR 280 407 -2 283 281 231 0 chr20 72132631 72132752 -21130 - L1MC/D LINE L1 -2068 5740 5592 1995 175 42 25 chr20 72133159 72133698 -20184 - MLT2A2 LTR ERVL -8 546 1 490 248 87 44 chr20 72134579 72134785 -19097 + MER20 DNA MER1_type 3 217 -2 223 192 19 0 chr20 72136150 72136202 -17680 + (TG)n Simple_repeat Simple_repeat 1 53 0 285 222 17 17 chr20 72136233 72136413 -17469 + (TG)n Simple_repeat Simple_repeat 1 180 0 517 274 17 11 chr20 72136497 72136676 -17206 + (TG)n Simple_repeat Simple_repeat 1 180 0 240 271 21 10 chr20 72136709 72136805 -17077 + (TG)n Simple_repeat Simple_repeat 1 97 0 263 255 27 0 chr20 72136825 72136974 -16908 + (TG)n Simple_repeat Simple_repeat 2 154 0 2344 86 0 6 chr20 72137755 72138068 -15814 - AluY SINE Alu 0 311 1 198 0 0 0 chr20 72138130 72138152 -15730 + (TGGGGG)n Simple_repeat Simple_repeat 3 24 0 247 151 93 0 chr20 72140565 72140651 -13231 + (CCCTG)n Simple_repeat Simple_repeat 3 96 0 318 170 21 75 chr20 72140730 72140918 -12964 + (CCTG)n Simple_repeat Simple_repeat 3 180 0 526 372 28 0 chr20 72141528 72141746 -12136 + MIR SINE MIR 37 260 -2 990 260 99 23 chr20 72141892 72142246 -11636 - L1ME3A LINE L1 -9 6161 5781 3886 188 33 17 chr20 72142271 72142971 -10911 + L1MB7 LINE L1 4727 5414 -770 2111 128 0 3 chr20 72142971 72143284 -10598 + AluSx SINE Alu 1 312 0 3886 188 33 17 chr20 72143284 72144003 -9879 + L1MB7 LINE L1 5414 6165 -19 835 280 69 0 chr20 72144023 72144298 -9584 - L1ME3A LINE L1 -422 5748 5455 245 397 23 0 chr20 72145275 72145406 -8476 + (CATG)n Simple_repeat Simple_repeat 3 136 0 * 291 407 6 0 chr20 72145349 72145526 -8356 + (TG)n Simple_repeat Simple_repeat 2 179 0 186 43 0 0 chr20 72145660 72145683 -8199 + (TG)n Simple_repeat Simple_repeat 1 23 0 513 333 25 0 chr20 72147739 72147943 -5939 - MER58A DNA MER1_type -15 209 1 2097 125 0 3 chr20 72149592 72149889 -3993 + AluSg SINE Alu 1 296 -14 2076 123 19 13 chr20 72150069 72150379 -3503 - AluSx SINE Alu 0 312 1 270 117 150 0 chr20 72150817 72150877 -3005 - L1PA16 LINE L1 -7 6159 6091 185 326 35 57 chr20 72151880 72152021 -1861 - MIR SINE MIR -83 179 42 792 241 91 5 chr20 72152153 72152352 -1530 + MER58A DNA MER1_type 9 224 0