3248 215 20 3 chr20 0 735 -72153147 + L1PA15-16 LINE L1 1867 2614 -4235 992 147 0 0 chr20 735 878 -72153004 + AluJo SINE Alu 1 143 -169 835 105 8 8 chr20 912 1045 -72152837 + L1PA15 LINE L1 6033 6165 0 502 273 17 17 chr20 1045 1221 -72152661 - L1MEc LINE L1 -4676 1720 1545 227 301 2 9 chr20 1673 1782 -72152100 + MIR3 SINE MIR 78 167 -41 247 158 35 53 chr20 1834 1891 -72151991 + MIR3 SINE MIR 108 163 -45 246 315 18 36 chr20 1927 2038 -72151844 + MER117 DNA MER1_type 74 182 -15 2322 84 3 3 chr20 2280 2578 -72151304 - AluSq SINE Alu -15 298 1 23 0 0 0 chr20 2590 2613 -72151269 + AT_rich Low_complexity Low_complexity 1 23 0 6979 127 14 6 chr20 3397 5026 -72148856 - L1MA2 LINE L1 0 6304 4664 3107 123 43 2 chr20 5028 5514 -72148368 + MER75 DNA T2_type 1 506 -8 206 62 31 0 chr20 5705 5737 -72148145 + (TC)n Simple_repeat Simple_repeat 1 33 0 261 0 0 0 chr20 7563 7592 -72146290 + (CA)n Simple_repeat Simple_repeat 2 30 0 341 308 47 86 chr20 7592 7826 -72146056 - L1ME LINE L1 -540 5581 5357 225 240 90 20 chr20 8164 8264 -72145618 - L1ME LINE L1 -251 5870 5764 35 24 0 0 chr20 8420 8462 -72145420 + AT_rich Low_complexity Low_complexity 1 42 0 234 341 12 12 chr20 8753 8838 -72145044 + L3 LINE CR1 1455 1539 -38 1654 283 61 6 chr20 9000 9711 -72144171 + L2 LINE L2 2417 3172 -141 1911 189 0 22 chr20 9761 10163 -72143719 - L1 LINE L1 -754 5392 5000 438 220 78 14 chr20 10188 10329 -72143553 + L2 LINE L2 3162 3311 -2 222 163 23 0 chr20 10753 10796 -72143086 + (TA)n Simple_repeat Simple_repeat 2 45 0 239 300 12 0 chr20 10834 10914 -72142968 + L2 LINE L2 2892 2972 -342 615 304 140 53 chr20 10967 11090 -72142792 + L2 LINE L2 1177 1288 -2026 2099 131 0 0 chr20 11090 11388 -72142494 - AluSc SINE Alu -11 298 1 615 304 140 53 chr20 11388 11659 -72142223 + L2 LINE L2 1288 1534 -1780 2304 98 10 3 chr20 11659 11964 -72141918 - AluSq SINE Alu -4 309 3 615 304 140 53 chr20 11964 12341 -72141541 + L2 LINE L2 1534 2016 -1298 2626 124 26 35 chr20 12820 13048 -72140834 - L1MA5 LINE L1 0 6300 6077 2050 151 15 18 chr20 13048 13386 -72140496 - MER1B DNA MER1_type 0 337 1 2626 124 26 35 chr20 13386 13616 -72140266 - L1MA5 LINE L1 -223 6077 5846 249 305 60 46 chr20 13719 13870 -72140012 + LTR16C LTR ERVL 323 475 -16 209 291 123 50 chr20 13894 14073 -72139809 + L2 LINE L2 2033 2224 -1090 2157 137 12 9 chr20 14074 14417 -72139465 - L1P LINE L1 -2289 3857 3514 214 255 0 0 chr20 14461 14508 -72139374 + CT-rich Low_complexity Low_complexity 1 47 0 2374 88 3 0 chr20 16022 16317 -72137565 - AluY SINE Alu -15 296 1 6667 73 24 0 chr20 16322 17573 -72136309 - L1PA8 LINE L1 -11 6161 4897 4410 106 12 5 chr20 17573 18236 -72135646 + L1P LINE L1 2119 2786 -3360 523 250 9 0 chr20 18434 18546 -72135336 + MER81 DNA DNA 1 113 -1 225 333 0 0 chr20 18855 18927 -72134955 + L2 LINE L2 3187 3258 -14 611 254 182 0 chr20 18985 19260 -72134622 + Charlie2 DNA MER1_type 1 325 -2457 415 265 19 52 chr20 19261 19472 -72134410 + Charlie2 DNA MER1_type 1855 2058 -804 * 948 264 74 7 chr20 19466 19872 -72134010 + Charlie2 DNA MER1_type 2380 2812 -50 2495 58 3 0 chr20 19971 20281 -72133601 - AluY SINE Alu 0 311 1 183 156 0 0 chr20 20627 20659 -72133223 + (TA)n Simple_repeat Simple_repeat 1 32 0 1579 123 67 15 chr20 20677 20946 -72132936 - L1PB4 LINE L1 -9 6147 5865 477 0 0 0 chr20 21307 21360 -72132522 + (TG)n Simple_repeat Simple_repeat 2 54 0 1524 203 81 13 chr20 21463 21848 -72132034 - L1M4 LINE L1 -899 5247 4837 1215 322 40 14 chr20 21857 22351 -72131531 + L1PA16 LINE L1 868 1374 -6200 12724 210 26 44 chr20 22817 28331 -72125551 + L1PA16 LINE L1 2182 7603 -1 2262 220 94 57 chr20 28398 28975 -72124907 - MER77 LTR ERV1 -7 598 1 5205 178 59 25 chr20 30591 31699 -72122183 - L1PA16 LINE L1 -6 6160 4954 2325 110 0 0 chr20 31699 32007 -72121875 - AluSg SINE Alu -2 308 1 5205 178 59 25 chr20 32007 32873 -72121009 - L1PA16 LINE L1 -1212 4954 4118 338 155 84 0 chr20 32878 32949 -72120933 - L1 LINE L1 -1888 4258 4182 1749 244 28 25 chr20 32984 33586 -72120296 - L1M4 LINE L1 -904 5242 4639 884 323 68 17 chr20 33619 34028 -72119854 + L1PBb LINE L1 8 437 -6412 363 364 67 18 chr20 34398 34563 -72119319 + L1PBb LINE L1 694 866 -5983 379 278 83 101 chr20 34601 34878 -72119004 + L1PBb LINE L1 796 1067 -5782 8181 157 95 10 chr20 35085 36776 -72117106 + L1PBb LINE L1 1040 2957 -3891 21 0 0 0 chr20 37622 37643 -72116239 + AT_rich Low_complexity Low_complexity 1 21 0 330 276 88 54 chr20 37724 37963 -72115919 - L1MDa LINE L1 -3987 2553 2307 276 256 116 39 chr20 38136 38343 -72115539 - L1MDa LINE L1 -3736 2804 2582 300 284 123 31 chr20 38544 38836 -72115046 - L1MDa LINE L1 -4640 2081 1763 354 273 169 8 chr20 38937 39186 -72114696 - HAL1 LINE L1 -1220 1287 999 304 297 187 29 chr20 39370 39616 -72114266 + HAL1 LINE L1 1613 1897 -610 248 273 140 47 chr20 40710 40860 -72113022 + MLT1J LTR MaLR 238 401 -110 336 266 35 18 chr20 41275 41388 -72112494 + L2 LINE L2 3199 3313 0 195 229 0 0 chr20 41644 41679 -72112203 - L3 LINE CR1 -93 1484 1450 725 276 126 37 chr20 41856 42709 -72111173 + L1MCc LINE L1 1129 2254 -4868 372 259 37 9 chr20 42724 42832 -72111050 + L1M3d LINE L1 1 111 -5780 3019 227 65 35 chr20 42837 44752 -72109130 + L1MCc LINE L1 2175 4145 -2796 2267 105 0 0 chr20 44760 45055 -72108827 - AluSg SINE Alu -15 295 1 392 283 27 36 chr20 45127 45346 -72108536 - L1M4 LINE L1 -3076 3070 2854 22 35 0 0 chr20 45346 45375 -72108507 + AT_rich Low_complexity Low_complexity 1 29 0 1230 265 51 14 chr20 45503 45668 -72108214 - L1M4 LINE L1 -3372 2774 2617 2306 80 3 13 chr20 45668 45969 -72107913 - AluSg SINE Alu -12 298 1 1230 265 51 14 chr20 45969 46237 -72107645 - L1M4 LINE L1 -3529 2617 2325 1308 125 41 108 chr20 46326 46485 -72107397 + L1MCa LINE L1 1164 1332 -5094 4908 55 16 0 chr20 46485 47107 -72106775 + L1PA8 LINE L1 5541 6172 0 1308 125 41 108 chr20 47107 47316 -72106566 + L1MCa LINE L1 1332 1507 -4919 5793 166 18 12 chr20 47393 48655 -72105227 - L1M1 LINE L1 -871 5432 4057 25026 29 15 1 chr20 48662 54708 -72099174 + L1PA2 LINE L1 1 6172 0 3244 169 35 27 chr20 54708 54776 -72099106 - L1M1 LINE L1 -2079 4067 4001 2282 99 6 10 chr20 54776 55089 -72098793 - AluSq SINE Alu -1 312 1 3244 169 35 27 chr20 55089 55795 -72098087 - L1M1 LINE L1 -2145 4001 3287 1133 164 55 14 chr20 55799 56165 -72097717 + L1M2 LINE L1 2647 3027 -3821 317 175 6 186 chr20 56193 56376 -72097506 + L1PBb LINE L1 711 860 -5344 1053 261 34 0 chr20 56392 56687 -72097195 + L1PA15-16 LINE L1 1265 1569 -5280 689 259 0 0 chr20 56667 56833 -72097049 + L1PA15-16 LINE L1 1336 1501 -5349 * 4654 238 24 76 chr20 56862 57675 -72096207 + L1PA15-16 LINE L1 1271 2125 -4724 2081 129 0 22 chr20 57675 58012 -72095870 - AluSx SINE Alu 0 312 1 4654 238 24 76 chr20 58012 59236 -72094646 + L1PA15-16 LINE L1 2125 3208 -3641 873 114 8 0 chr20 59237 59369 -72094513 + L1PB4 LINE L1 6016 6148 -8 430 215 15 74 chr20 59400 59535 -72094347 + L1ME1 LINE L1 5461 5587 -579 306 73 0 0 chr20 59536 59577 -72094305 + (T)n Simple_repeat Simple_repeat 1 41 0 1567 252 29 41 chr20 59743 60323 -72093559 + L1ME1 LINE L1 5588 6160 -6 357 314 43 24 chr20 62074 62402 -72091480 - L1ME4a LINE L1 -211 5910 5577 438 269 71 25 chr20 63093 63290 -72090592 + L2 LINE L2 3104 3309 -4 195 129 0 0 chr20 64295 64326 -72089556 + (CAA)n Simple_repeat Simple_repeat 1 31 0 821 214 65 0 chr20 64682 64850 -72089032 - MER5A DNA MER1_type -9 180 2 225 194 65 32 chr20 64963 65025 -72088857 - MIR SINE MIR -77 185 122 298 370 92 31 chr20 65691 66072 -72087810 + L2 LINE L2 2554 2957 -357 185 401 28 14 chr20 66623 66765 -72087117 + MIR SINE MIR 8 151 -111 299 362 97 16 chr20 67368 67553 -72086329 + MIR SINE MIR 5 204 -58 456 274 74 112 chr20 68105 68529 -72085353 + L1MDa LINE L1 505 855 -5685 4465 169 39 30 chr20 68774 69880 -72084002 - L1MA9 LINE L1 -30 6282 5167 1059 217 10 20 chr20 69881 70180 -72083702 + L1MA9 LINE L1 4849 5144 -1002 2821 198 90 57 chr20 70192 70243 -72083639 + L1MDa LINE L1 1227 1275 -5265 2317 98 0 19 chr20 70243 70558 -72083324 + AluY SINE Alu 1 309 -2 2821 198 90 57 chr20 70558 71382 -72082500 + L1MDa LINE L1 1275 2152 -4388 1503 159 53 4 chr20 71382 71646 -72082236 - AluJb SINE Alu -1 311 35 2821 198 90 57 chr20 71646 71923 -72081959 + L1MDa LINE L1 2152 2418 -4122 1046 262 36 13 chr20 71924 72221 -72081661 + L1MDa LINE L1 2479 2768 -3772 1708 140 70 7 chr20 72221 72507 -72081375 + AluJb SINE Alu 1 304 -8 1046 262 36 13 chr20 72507 72650 -72081232 + L1MDa LINE L1 2768 3078 -3462 * 1234 251 61 30 chr20 72645 73107 -72080775 + L1MD2 LINE L1 5631 6106 -253 434 223 19 0 chr20 73170 73273 -72080609 + MER3 DNA MER1_type 2 106 -103 632 250 36 12 chr20 73282 73450 -72080432 + MIR SINE MIR 88 259 -3 458 339 79 83 chr20 73502 73998 -72079884 - L1MEd LINE L1 -5373 746 253 329 305 63 26 chr20 74105 74418 -72079464 - L1MDa LINE L1 -3819 2721 2395 277 127 36 0 chr20 75010 75065 -72078817 - L1MB3 LINE L1 0 6183 6127 2832 118 42 16 chr20 75067 75566 -72078316 - L1MA5 LINE L1 0 6300 5789 239 133 22 0 chr20 75634 75679 -72078203 + (TA)n Simple_repeat Simple_repeat 2 47 0 574 176 0 0 chr20 75679 75781 -72078101 - L1 LINE L1 -1197 4949 4848 288 0 0 0 chr20 76629 76661 -72077221 + (TG)n Simple_repeat Simple_repeat 1 32 0 319 286 224 5 chr20 76666 76862 -72077020 + MIR SINE MIR 11 249 -13 192 40 0 0 chr20 78453 78478 -72075404 + (TTG)n Simple_repeat Simple_repeat 3 27 0 377 283 0 0 chr20 78807 78899 -72074983 + L1MD3 LINE L1 6805 6896 -1099 7387 30 0 0 chr20 78899 79814 -72074068 - L1PA2 LINE L1 -1932 4214 3300 9657 30 5 0 chr20 79816 81746 -72072136 + L1PA2 LINE L1 4222 6155 0 1827 199 147 104 chr20 81748 81970 -72071912 + L1MC3 LINE L1 6871 7082 -703 304 259 0 12 chr20 81970 82051 -72071831 + MLT1I LTR MaLR 35 114 -453 1827 199 147 104 chr20 82051 82619 -72071263 + L1MC3 LINE L1 7082 7778 -7 354 312 70 14 chr20 82692 83061 -72070821 - L1M4 LINE L1 -2576 3570 3181 470 246 53 91 chr20 83084 83166 -72070716 + MLT1I LTR MaLR 104 188 -221 2085 131 3 0 chr20 83166 83457 -72070425 + AluSx SINE Alu 7 298 -14 470 246 53 91 chr20 83457 83659 -72070223 + MLT1I LTR MaLR 188 377 -32 21 0 0 0 chr20 83662 83683 -72070199 + AT_rich Low_complexity Low_complexity 1 21 0 471 35 0 0 chr20 83772 83829 -72070053 + (CA)n Simple_repeat Simple_repeat 2 58 0 272 133 0 0 chr20 83874 83919 -72069963 - L1MB7 LINE L1 -31 6153 6109 293 308 48 10 chr20 83919 84127 -72069755 - L1M4 LINE L1 -3021 3125 2910 344 163 36 104 chr20 85189 85248 -72068634 + L1MEc LINE L1 2521 2582 -3958 2237 124 12 15 chr20 85248 85586 -72068296 + MER1B DNA MER1_type 1 337 0 344 163 36 104 chr20 85586 85678 -72068204 + L1MEc LINE L1 2582 2644 -3896 3799 189 72 31 chr20 85684 86298 -72067584 - L1MA9 LINE L1 -38 6274 5602 1458 187 48 31 chr20 86298 86587 -72067295 - AluJo SINE Alu -18 294 1 3799 189 72 31 chr20 86587 86952 -72066930 - L1MA9 LINE L1 -710 5602 5254 642 248 95 5 chr20 87010 87220 -72066662 + L1MEc LINE L1 2712 2940 -3600 2614 229 39 35 chr20 87223 87962 -72065920 + L1M3b LINE L1 1 742 -5539 496 273 9 90 chr20 87943 88188 -72065694 + L1M3b LINE L1 599 794 -5487 * 2100 203 107 39 chr20 88241 88858 -72065024 + L1MD2 LINE L1 5680 6338 -21 700 260 25 15 chr20 89201 89397 -72064485 - MLT1H LTR MaLR -196 353 156 560 133 0 50 chr20 89875 89995 -72063887 - L1PA15 LINE L1 0 6165 6052 289 132 0 0 chr20 90022 90075 -72063807 - L1MA9 LINE L1 -35 6277 6225 867 175 18 0 chr20 90155 90326 -72063556 - L1MA9 LINE L1 -45 6267 6094 2394 77 0 3 chr20 90336 90646 -72063236 - AluY SINE Alu -2 309 1 2112 133 0 0 chr20 90646 90948 -72062934 - AluSx SINE Alu -10 302 1 1099 82 0 0 chr20 90949 91083 -72062799 - AluSq/x SINE Alu -179 134 1 1510 164 40 0 chr20 91083 91381 -72062501 - L1MA9 LINE L1 -209 6103 5794 344 91 36 0 chr20 91383 91438 -72062444 + L1MA9 LINE L1 5731 5787 -393 3385 73 0 9 chr20 91469 91921 -72061961 + LTR7 LTR ERV1 1 448 -2 6478 97 28 41 chr20 91924 93481 -72060401 + HERVH LTR ERV1 1 1855 -5858 5393 107 1 9 chr20 93481 94334 -72059548 + HERVH LTR ERV1 2142 2987 -4726 855 134 13 0 chr20 94328 94477 -72059405 + HERVH LTR ERV1 3140 3290 -4423 * 3245 101 0 10 chr20 94467 94974 -72058908 + HERVH LTR ERV1 3492 3993 -3720 1261 89 0 0 chr20 94976 95156 -72058726 + HERVH LTR ERV1 4488 4667 -3046 * 13577 76 4 7 chr20 95152 97104 -72056778 + HERVH LTR ERV1 5769 7713 0 1872 74 4 11 chr20 97104 97373 -72056509 + LTR7 LTR ERV1 1 267 -183 4491 124 4 13 chr20 97475 98242 -72055640 + HERVH LTR ERV1 2228 2987 -4726 855 134 13 0 chr20 98236 98385 -72055497 + HERVH LTR ERV1 3140 3290 -4423 * 3245 101 0 10 chr20 98375 98882 -72055000 + HERVH LTR ERV1 3492 3993 -3720 1261 89 0 0 chr20 98884 99064 -72054818 + HERVH LTR ERV1 4488 4667 -3046 * 13651 74 4 7 chr20 99060 101012 -72052870 + HERVH LTR ERV1 5769 7713 0 3336 76 7 7 chr20 101012 101460 -72052422 + LTR7 LTR ERV1 1 448 -2 1092 189 5 5 chr20 101464 101670 -72052212 + L1PA16 LINE L1 5937 6142 -24 1885 156 20 3 chr20 101683 101978 -72051904 + AluJo SINE Alu 1 300 -12 3272 133 70 23 chr20 102012 102077 -72051805 - L1MA8 LINE L1 -170 6121 6061 2095 141 0 3 chr20 102077 102376 -72051506 - AluSq SINE Alu -12 301 4 3272 133 70 23 chr20 102376 102921 -72050961 - L1MA8 LINE L1 -230 6061 5482 * 4736 172 81 3 chr20 102916 103944 -72049938 - L1MA8 LINE L1 -1397 4749 3642 1558 121 4 0 chr20 104053 104302 -72049580 + L1MA4 LINE L1 6046 6295 -5 42 77 0 0 chr20 104303 104394 -72049488 + AT_rich Low_complexity Low_complexity 1 91 0 180 0 0 0 chr20 104400 104420 -72049462 + (TAAAA)n Simple_repeat Simple_repeat 4 23 0 180 0 0 0 chr20 105707 105727 -72048155 + (CA)n Simple_repeat Simple_repeat 2 21 0 11778 205 25 19 chr20 105826 106224 -72047658 + L1PA16 LINE L1 1802 2196 -3970 270 0 0 0 chr20 106224 106254 -72047628 + (GAAAA)n Simple_repeat Simple_repeat 1 30 0 11778 205 25 19 chr20 106254 110189 -72043693 + L1PA16 LINE L1 2196 6157 -9 284 340 61 46 chr20 111659 111856 -72042026 - MIR SINE MIR -52 210 11 183 80 0 0 chr20 113273 113298 -72040584 + (T)n Simple_repeat Simple_repeat 1 25 0 2638 40 0 0 chr20 113298 113624 -72040258 - LTR17 LTR ERV1 -454 326 1 2313 51 0 0 chr20 113624 113916 -72039966 - HERV17 LTR ERV1 0 8626 8335 285 51 0 0 chr20 113906 113945 -72039937 - HERV17 LTR ERV1 -1078 7548 7510 * 22620 47 1 3 chr20 113938 116774 -72037108 - HERV17 LTR ERV1 -2607 6019 3190 1378 103 0 0 chr20 117333 117507 -72036375 - AluSx SINE Alu -138 174 1 198 0 0 0 chr20 117511 117533 -72036349 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 220 342 26 44 chr20 118210 118324 -72035558 + L2 LINE L2 2992 3103 -169 369 43 0 0 chr20 118352 118399 -72035483 + (TG)n Simple_repeat Simple_repeat 1 47 0 5409 93 19 7 chr20 118401 119209 -72034673 - L1PA15 LINE L1 -6 7578 6762 3389 153 2 8 chr20 119208 119840 -72034042 - L1PA12 LINE L1 -1255 6310 5683 * 5906 94 9 48 chr20 119840 120424 -72033458 + L1PA12 LINE L1 6342 6947 -640 2184 121 0 3 chr20 120424 120729 -72033153 + AluSq SINE Alu 1 304 -9 5906 94 9 48 chr20 120729 121303 -72032579 + L1PA12 LINE L1 6947 7453 -134 2115 132 0 0 chr20 121303 121591 -72032291 + AluSx SINE Alu 1 288 -24 5906 94 9 48 chr20 121591 121721 -72032161 + L1PA12 LINE L1 7453 7587 0 1165 113 13 0 chr20 121746 121905 -72031977 - AluSq SINE Alu -7 306 146 11018 177 35 17 chr20 121911 124084 -72029798 - L1PA15 LINE L1 -5341 2224 12 2060 276 178 15 chr20 124084 124271 -72029611 - L2 LINE L2 -10 3303 3148 1943 122 52 0 chr20 124271 124559 -72029323 + AluSq SINE Alu 1 303 -10 2060 276 178 15 chr20 124559 125549 -72028333 - L2 LINE L2 -165 3148 1921 499 336 29 13 chr20 125570 125808 -72028074 - MIR SINE MIR -19 243 2 3335 59 2 0 chr20 126087 126508 -72027374 - L1PA5 LINE L1 0 6154 5733 4094 36 13 0 chr20 126508 127036 -72026846 + L1P LINE L1 4186 4720 -1426 2653 134 14 1 chr20 128308 128795 -72025087 + L1PA14 LINE L1 5631 6154 0 22 35 0 0 chr20 129516 129545 -72024337 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr20 129802 129823 -72024059 + AT_rich Low_complexity Low_complexity 1 21 0 254 186 20 88 chr20 129824 129926 -72023956 - L1ME LINE L1 -5069 1001 907 2792 256 57 26 chr20 129927 130892 -72022990 + L1M4 LINE L1 3197 4206 -1940 2195 117 8 8 chr20 130892 131250 -72022632 - L1MA3 LINE L1 0 6305 5948 2792 256 57 26 chr20 131250 131470 -72022412 + L1M4 LINE L1 4206 4418 -1728 309 208 72 13 chr20 132150 132267 -72021615 - MLT1I LTR MaLR -236 173 46 2223 149 8 0 chr20 132428 132790 -72021092 - MER47A DNA MER2_type -1 365 1 1809 159 28 7 chr20 132905 133188 -72020694 - AluJo SINE Alu -23 289 1 249 317 33 33 chr20 134113 134233 -72019649 - MIR SINE MIR -73 135 16 1010 203 20 0 chr20 134439 134636 -72019246 - MER105 DNA DNA -3 201 1 428 363 113 39 chr20 134911 135595 -72018287 + L2 LINE L2 227 1003 -2311 2262 65 0 4 chr20 135595 135871 -72018011 - AluY SINE Alu 0 311 37 428 363 113 39 chr20 135871 136140 -72017742 + L2 LINE L2 1003 1251 -2063 214 255 0 20 chr20 136180 136231 -72017651 + L2 LINE L2 3200 3249 -64 * 523 255 62 14 chr20 136203 136348 -72017534 + L2 LINE L2 3161 3312 -1 216 343 29 20 chr20 136399 136501 -72017381 - L2 LINE L2 -226 3046 2944 811 246 51 60 chr20 136742 137076 -72016806 + Charlie1a DNA MER1_type 1 331 -1124 626 260 46 23 chr20 137179 137398 -72016484 + MER93a LTR ERV1 61 284 -118 1118 152 0 0 chr20 137403 137568 -72016314 - AluJo/FRAM SINE Alu -15 297 133 1830 132 0 60 chr20 137569 137887 -72015995 - AluJb SINE Alu -13 299 1 616 118 0 36 chr20 137904 138014 -72015868 + MER93a LTR ERV1 297 402 0 1146 236 19 0 chr20 138016 138283 -72015599 + Charlie1a DNA MER1_type 344 615 -840 913 268 231 25 chr20 138283 138724 -72015158 + MLT1G1 LTR MaLR 56 587 -8 582 195 79 12 chr20 139229 139393 -72014489 + Charlie1 DNA MER1_type 1463 1637 -1124 181 299 21 52 chr20 140013 140110 -72013772 + MIR SINE MIR 89 182 -80 911 186 0 0 chr20 140145 140290 -72013592 + FAM SINE Alu 1 145 -40 360 148 0 0 chr20 140301 140362 -72013520 + (TG)n Simple_repeat Simple_repeat 2 62 0 337 235 15 125 chr20 140529 140665 -72013217 + L2 LINE L2 3192 3312 -1 2412 93 3 3 chr20 140921 141234 -72012648 - AluSq SINE Alu 0 313 1 930 216 64 0 chr20 141897 142101 -72011781 + L1M1 LINE L1 562 778 -6787 8079 170 42 35 chr20 142108 143914 -72009968 + L1M1 LINE L1 1680 3497 -4068 819 130 17 17 chr20 143925 144102 -72009780 + GA-rich Low_complexity Low_complexity 1 177 0 3920 194 9 6 chr20 144102 144130 -72009752 + L1M1 LINE L1 3464 3490 -4075 360 0 0 0 chr20 144130 144170 -72009712 + (GGAA)n Simple_repeat Simple_repeat 1 40 0 3920 194 9 6 chr20 144170 145134 -72008748 + L1M1 LINE L1 3490 4461 -3104 8090 119 14 4 chr20 145219 146496 -72007386 + HSMAR2 DNA Mariner 12 1301 -1 396 323 161 0 chr20 146544 146699 -72007183 - MER5A DNA MER1_type 0 189 10 292 247 84 97 chr20 146708 147328 -72006554 + L1M4 LINE L1 2876 3487 -2659 4358 79 7 19 chr20 148411 149029 -72004853 + L1PA12 LINE L1 5552 6161 -7 2227 100 0 17 chr20 149322 149621 -72004261 + AluSx SINE Alu 1 294 -18 1190 78 78 0 chr20 150315 150494 -72003388 - L1PA10 LINE L1 -20 6148 5956 299 219 14 14 chr20 150936 151009 -72002873 + MIR SINE MIR 78 150 -112 956 168 24 64 chr20 152784 152815 -72001067 - MER33 DNA MER1_type -2341 244 213 2372 97 3 0 chr20 152815 153114 -72000768 - AluSg SINE Alu -10 300 1 956 168 24 64 chr20 153114 153332 -72000550 - MER33 DNA MER1_type -2372 213 5 363 336 0 20 chr20 153429 153575 -72000307 + MIR SINE MIR 5 147 -115 830 169 0 0 chr20 153666 153814 -72000068 - L1MA10 LINE L1 -2 6332 6185 2870 159 224 32 chr20 153815 154350 -71999532 + L1 LINE L1 4217 4648 -1498 2291 59 3 21 chr20 154350 154682 -71999200 + AluY SINE Alu 1 327 0 2870 159 224 32 chr20 154682 154919 -71998963 + L1 LINE L1 4648 5138 -1008 357 226 11 11 chr20 155460 155553 -71998329 + MLT1J LTR MaLR 24 116 -395 1617 177 6 51 chr20 155795 156106 -71997776 + AluJo SINE Alu 1 297 -15 2327 114 0 0 chr20 156109 156417 -71997465 + AluSq SINE Alu 1 308 -5 9158 86 30 13 chr20 156657 156751 -71997131 + HSMAR1 DNA Mariner 1 92 -1195 2368 86 3 0 chr20 156751 157052 -71996830 - AluSp SINE Alu -11 302 1 9158 86 30 13 chr20 157052 158222 -71995660 + HSMAR1 DNA Mariner 92 1287 0 1803 185 45 24 chr20 158891 159269 -71994613 + MLT1B LTR MaLR 5 390 0 1074 164 0 44 chr20 159336 159519 -71994363 + FAM SINE Alu 1 175 0 2431 99 0 0 chr20 159566 159870 -71994012 - AluSq SINE Alu -9 304 1 451 255 60 0 chr20 160755 160904 -71992978 - MIR SINE MIR -23 239 82 2204 90 0 4 chr20 161191 161469 -71992413 + AluSg SINE Alu 26 302 -8 1096 140 12 0 chr20 161893 162057 -71991825 + AluSg/x SINE Alu 138 303 -9 307 314 164 5 chr20 162084 162291 -71991591 - MIR SINE MIR -15 247 8 2385 94 0 0 chr20 162401 162698 -71991184 + AluY SINE Alu 1 297 -14 457 340 69 13 chr20 163698 164089 -71989793 - L1ME4a LINE L1 -3 6118 5706 233 306 92 19 chr20 164708 164914 -71988968 + L1MC4a LINE L1 6047 6267 -1541 1820 213 104 65 chr20 165153 165453 -71988429 + L1MC5 LINE L1 6617 6904 -1057 3926 116 24 2 chr20 165453 166050 -71987832 + L1MA9 LINE L1 5701 6310 -2 1820 213 104 65 chr20 166050 166126 -71987756 + L1MC5 LINE L1 6904 6976 -985 2145 131 6 10 chr20 166126 166438 -71987444 + AluSx SINE Alu 1 311 -1 1820 213 104 65 chr20 166438 166829 -71987053 + L1MC5 LINE L1 6976 7415 -546 423 219 116 0 chr20 167460 167615 -71986267 + L1MC5 LINE L1 7475 7647 -314 27 49 0 0 chr20 167617 167658 -71986224 + AT_rich Low_complexity Low_complexity 1 41 0 2208 117 0 16 chr20 167686 167994 -71985888 - AluSx SINE Alu -9 303 1 3588 179 52 20 chr20 168010 168046 -71985836 - L1MA9 LINE L1 -37 6275 6242 285 29 0 0 chr20 168046 168080 -71985802 + (TA)n Simple_repeat Simple_repeat 1 34 0 261 0 0 0 chr20 168079 168108 -71985774 + (GA)n Simple_repeat Simple_repeat 2 30 0 * 3588 179 52 20 chr20 168080 168805 -71985077 - L1MA9 LINE L1 -70 6242 5519 665 249 25 35 chr20 168833 169034 -71984848 + L1MC5 LINE L1 7715 7913 -48 2603 102 14 3 chr20 169041 169412 -71984470 - THE1C LTR MaLR 0 375 1 180 0 0 0 chr20 169593 169613 -71984269 + (CA)n Simple_repeat Simple_repeat 1 20 0 1179 229 185 25 chr20 169665 170032 -71983850 - MLT1H LTR MaLR 0 549 124 498 33 0 0 chr20 170115 170175 -71983707 + (GGAA)n Simple_repeat Simple_repeat 3 62 0 343 273 113 7 chr20 170630 170780 -71983102 + L1M4 LINE L1 2875 3040 -3106 27 81 0 0 chr20 170943 171005 -71982877 + AT_rich Low_complexity Low_complexity 1 62 0 2221 112 0 3 chr20 171067 171362 -71982520 + AluSc SINE Alu 1 294 -15 2246 112 0 0 chr20 171413 171709 -71982173 + AluSq SINE Alu 1 296 -17 2398 102 0 0 chr20 171742 172046 -71981836 + AluSx SINE Alu 1 304 -8 2457 227 58 42 chr20 172250 172540 -71981342 - L1ME1 LINE L1 -15 6151 5867 2581 148 26 7 chr20 172540 172958 -71980924 + MSTA LTR MaLR 1 426 -2 2457 227 58 42 chr20 172958 173132 -71980750 - L1ME1 LINE L1 -299 5867 5697 2084 126 22 0 chr20 173132 173433 -71980449 + AluSx SINE Alu 1 307 0 2457 227 58 42 chr20 173433 173659 -71980223 - L1ME1 LINE L1 -469 5697 5448 200 158 40 53 chr20 173721 173797 -71980085 + A-rich Low_complexity Low_complexity 3 77 0 3649 167 60 19 chr20 173894 174575 -71979307 + MER67C LTR ERV1 2 710 0 375 23 0 0 chr20 174595 174639 -71979243 + (CA)n Simple_repeat Simple_repeat 1 44 0 478 217 104 17 chr20 174641 174756 -71979126 + MER50 LTR ERV1 10 134 -600 2126 131 0 0 chr20 174756 175053 -71978829 + AluSx SINE Alu 7 303 -9 1837 142 37 0 chr20 175053 175349 -71978533 - L1PB4 LINE L1 -233 5923 5617 1097 126 0 0 chr20 175350 175501 -71978381 + AluSg/x SINE Alu 146 296 -14 3741 117 36 6 chr20 175502 176050 -71977832 - MER4E-int LTR ERV1 -6193 565 1 1684 50 0 0 chr20 176050 176248 -71977634 - MER4E LTR ERV1 0 766 569 2982 87 36 42 chr20 176277 176575 -71977307 - MER4E LTR ERV1 -298 468 173 2445 74 0 0 chr20 176575 176874 -71977008 - AluY SINE Alu -12 299 1 2982 87 36 42 chr20 176874 177046 -71976836 - MER4E LTR ERV1 -593 173 1 278 124 0 169 chr20 177046 177133 -71976749 + MLT2C2 LTR ERVL 393 464 0 2857 103 81 48 chr20 177169 177243 -71976639 + L1MA5 LINE L1 5788 5858 -442 2071 127 18 26 chr20 177243 177583 -71976299 - MER1B DNA MER1_type 0 337 1 2857 103 81 48 chr20 177583 177682 -71976200 + L1MA5 LINE L1 5858 5952 -348 2329 98 3 0 chr20 177682 177979 -71975903 + AluSx SINE Alu 1 298 -14 2857 103 81 48 chr20 177979 178301 -71975581 + L1MA5 LINE L1 5952 6300 0 21 36 0 0 chr20 178301 178329 -71975553 + AT_rich Low_complexity Low_complexity 1 28 0 594 226 39 89 chr20 178380 178425 -71975457 + L1MC4 LINE L1 7688 7734 -308 252 0 0 0 chr20 178425 178453 -71975429 + (TA)n Simple_repeat Simple_repeat 2 29 0 594 226 39 89 chr20 178453 178664 -71975218 + L1MC4 LINE L1 7734 7931 -111 21 57 0 0 chr20 178796 178831 -71975051 + AT_rich Low_complexity Low_complexity 1 35 0 189 0 0 0 chr20 179161 179182 -71974700 + (TTTTG)n Simple_repeat Simple_repeat 5 25 0 539 29 14 0 chr20 179591 179660 -71974222 + (TAGA)n Simple_repeat Simple_repeat 1 70 0 209 83 28 0 chr20 179661 179697 -71974185 + (CATA)n Simple_repeat Simple_repeat 4 40 0 733 287 78 25 chr20 179777 180098 -71973784 - L1ME LINE L1 -297 5824 5487 191 130 0 22 chr20 180967 181013 -71972869 + (GA)n Simple_repeat Simple_repeat 2 46 0 819 286 68 53 chr20 182139 182593 -71971289 - LTR16B LTR ERVL -2 462 2 2027 224 13 35 chr20 183528 183792 -71970090 - L1ME2 LINE L1 -301 5863 5612 2191 73 4 18 chr20 183792 184106 -71969776 - AluSp SINE Alu 0 325 16 2027 224 13 35 chr20 184106 184357 -71969525 - L1ME2 LINE L1 -552 5612 5357 449 251 19 103 chr20 184379 184526 -71969356 + L1ME1 LINE L1 5915 6030 -136 2592 47 7 0 chr20 184526 184824 -71969058 + AluY SINE Alu 1 300 -11 449 251 19 103 chr20 184824 184947 -71968935 + L1ME1 LINE L1 6030 6162 -4 25 0 0 0 chr20 184949 184974 -71968908 + AT_rich Low_complexity Low_complexity 1 25 0 587 288 68 50 chr20 185086 185511 -71968371 + L1ME LINE L1 5289 5728 -393 * 3690 148 44 0 chr20 185499 186086 -71967796 + L1M1 LINE L1 1 613 -6952 384 22 0 0 chr20 186086 186131 -71967751 + (TG)n Simple_repeat Simple_repeat 1 45 0 254 32 0 0 chr20 186131 186162 -71967720 - AluYa5 SINE Alu -106 195 165 2599 179 155 22 chr20 186162 186755 -71967127 + MER52A LTR ERV1 1 672 -1083 38 0 0 0 chr20 186952 186990 -71966892 + AT_rich Low_complexity Low_complexity 1 38 0 33 0 0 0 chr20 187377 187410 -71966472 + AT_rich Low_complexity Low_complexity 1 33 0 2312 103 3 7 chr20 187620 187930 -71965952 - AluSg SINE Alu -1 309 1 1292 134 216 17 chr20 188218 188473 -71965409 + AluSg1 SINE Alu 2 302 0 1026 204 16 0 chr20 188483 188674 -71965208 + MLT1E2 LTR MaLR 272 465 -161 528 200 27 0 chr20 188834 188944 -71964938 - L1PBa LINE L1 -6316 547 435 * 758 219 6 0 chr20 188940 189100 -71964782 - L1PBa LINE L1 -6697 166 6 501 186 0 0 chr20 189123 189209 -71964673 - L1MA7 LINE L1 -342 5949 5864 262 287 114 31 chr20 189211 189535 -71964347 - L2 LINE L2 -133 3180 2830 253 301 93 26 chr20 189831 190024 -71963858 + HERVL74 LTR ERVL 3071 3276 -2409 959 158 113 0 chr20 190040 190217 -71963665 + L1PB4 LINE L1 5958 6154 -2 2379 82 7 0 chr20 190419 190722 -71963160 + AluSx SINE Alu 1 305 -7 1946 209 125 48 chr20 190952 191520 -71962362 + MER76 LTR ERV 6 629 -59 2025 150 0 0 chr20 191520 191814 -71962068 - AluJb SINE Alu -18 294 1 1946 209 125 48 chr20 191814 191877 -71962005 + MER76 LTR ERV 629 686 -2 564 242 13 46 chr20 191899 192052 -71961830 + MIR SINE MIR 61 208 -54 235 305 86 86 chr20 192175 192293 -71961589 + MLT1K LTR MaLR 125 242 -346 2150 130 0 7 chr20 192293 192594 -71961288 - AluSx SINE Alu -13 299 1 235 305 86 86 chr20 192594 192849 -71961033 + MLT1K LTR MaLR 241 498 -90 797 261 29 0 chr20 192958 193165 -71960717 - LTR16A LTR ERVL -8 442 230 492 208 0 0 chr20 193584 193690 -71960192 + GA-rich Low_complexity Low_complexity 2 107 0 423 83 0 0 chr20 194037 194097 -71959785 + (CA)n Simple_repeat Simple_repeat 1 60 0 295 233 242 0 chr20 194344 194464 -71959418 + MIR SINE MIR 114 262 0 533 306 82 64 chr20 194821 194968 -71958914 + L2 LINE L2 2214 2357 -957 1642 138 52 11 chr20 194968 195259 -71958623 - AluJo SINE Alu 0 305 4 533 306 82 64 chr20 195259 195585 -71958297 + L2 LINE L2 2357 2708 -606 1949 166 0 0 chr20 195585 195881 -71958001 - AluJb SINE Alu -16 296 1 533 306 82 64 chr20 195881 196121 -71957761 + L2 LINE L2 2708 2942 -372 260 228 0 0 chr20 196142 196199 -71957683 + MER5A DNA MER1_type 18 74 -115 2204 125 0 3 chr20 196200 196503 -71957379 + AluSx SINE Alu 1 302 -10 345 47 0 0 chr20 196503 196546 -71957336 + (GGGA)n Simple_repeat Simple_repeat 1 43 0 507 127 56 8 chr20 196546 196672 -71957210 + GA-rich Low_complexity Low_complexity 1 132 0 255 248 229 0 chr20 196672 196777 -71957105 + MER5A DNA MER1_type 61 189 0 401 230 11 0 chr20 197296 197383 -71956499 + L2 LINE L2 2976 3063 -209 2325 90 0 40 chr20 197402 197723 -71956159 - AluSg1 SINE Alu -1 308 1 245 341 0 0 chr20 197941 198026 -71955856 + GA-rich Low_complexity Low_complexity 3 87 0 221 275 106 56 chr20 198308 198450 -71955432 - MIR3 SINE MIR -12 196 48 285 288 42 17 chr20 200188 200306 -71953576 + MIR3 SINE MIR 12 132 -76 200 196 107 0 chr20 200505 200561 -71953321 + MIR SINE MIR 34 95 -113 399 188 135 0 chr20 200570 200666 -71953216 + MIR SINE MIR 36 144 -118 260 232 72 0 chr20 201157 201226 -71952656 + MIR SINE MIR 139 212 -50 993 106 0 0 chr20 201548 201728 -71952154 + (GGGA)n Simple_repeat Simple_repeat 1 180 0 21 57 0 0 chr20 202008 202043 -71951839 + GC_rich Low_complexity Low_complexity 1 35 0 327 285 79 18 chr20 202118 202283 -71951599 + MER104 DNA Tc2 6 180 0 2211 69 4 0 chr20 202296 202570 -71951312 + AluSg SINE Alu 1 275 -35 180 0 0 0 chr20 202576 202596 -71951286 + (TAA)n Simple_repeat Simple_repeat 2 21 0 182 189 54 0 chr20 202760 202797 -71951085 - MIR SINE MIR -153 109 71 456 256 89 49 chr20 203004 203250 -71950632 - MIR SINE MIR 0 262 7 464 328 22 6 chr20 203296 203476 -71950406 + MIR SINE MIR 10 192 -70 1711 194 0 3 chr20 203479 203765 -71950117 + AluJo SINE Alu 1 285 -27 205 40 0 0 chr20 203765 203790 -71950092 + (TAAA)n Simple_repeat Simple_repeat 2 104 0 1113 168 0 0 chr20 203797 203964 -71949918 + AluJo SINE Alu 120 286 -26 459 243 52 95 chr20 204159 204303 -71949579 - MIR SINE MIR 0 262 128 1636 176 48 4 chr20 204303 204575 -71949307 + AluJb SINE Alu 1 284 -28 459 243 52 95 chr20 204575 204640 -71949242 - MIR SINE MIR -134 128 62 546 328 74 11 chr20 204770 205054 -71948828 + L2 LINE L2 3012 3313 0 190 317 0 0 chr20 205092 205133 -71948749 + MIR SINE MIR 15 55 -207 2227 110 0 3 chr20 205195 205487 -71948395 + AluSx SINE Alu 1 291 -21 2275 112 0 0 chr20 205916 206210 -71947672 - AluSx SINE Alu -18 294 1 567 286 22 32 chr20 206328 206513 -71947369 + MIR SINE MIR 48 230 -32 249 270 0 0 chr20 207116 207179 -71946703 + MIR SINE MIR 6 68 -194 2081 119 14 3 chr20 207180 207465 -71946417 + AluSx SINE Alu 1 288 -24 23 33 0 0 chr20 207465 207495 -71946387 + AT_rich Low_complexity Low_complexity 1 30 0 768 278 0 28 chr20 207495 207707 -71946175 + MIR SINE MIR 57 262 0 1906 106 31 0 chr20 208224 208480 -71945402 - AluSq SINE Alu -49 264 1 337 143 14 0 chr20 208770 208840 -71945042 - L1MD2 LINE L1 0 6359 6289 2174 113 0 39 chr20 208841 209152 -71944730 + AluSx SINE Alu 1 299 -13 255 125 0 0 chr20 209152 209192 -71944690 + (GGGGA)n Simple_repeat Simple_repeat 1 40 0 4873 210 13 37 chr20 209215 210253 -71943629 - L1MC4a LINE L1 -27 7781 6720 2073 113 70 0 chr20 210253 210537 -71943345 + AluSx SINE Alu 1 304 -8 4873 210 13 37 chr20 210537 210919 -71942963 - L1MC4a LINE L1 -1088 6720 4825 297 232 11 11 chr20 211367 211462 -71942420 + MER20B DNA MER1_type 653 747 -36 465 230 141 1 chr20 211462 211591 -71942291 - MIR SINE MIR -62 146 40 1415 272 25 31 chr20 211636 212081 -71941801 + MLT1J2 LTR MaLR 1 442 -8 576 278 119 16 chr20 212315 212509 -71941373 + MIR SINE MIR 49 262 0 243 268 134 0 chr20 212683 212765 -71941117 - MIR SINE MIR -73 135 43 189 0 0 0 chr20 213170 213191 -71940691 + (T)n Simple_repeat Simple_repeat 1 21 0 1566 196 206 141 chr20 213462 213845 -71940037 + L2 LINE L2 1277 1634 -1680 687 228 0 24 chr20 213845 214012 -71939870 + AluJb SINE Alu 136 298 -14 1566 196 206 141 chr20 214012 214661 -71939221 + L2 LINE L2 1634 2553 -761 2417 88 0 13 chr20 215126 215433 -71938449 + AluSq SINE Alu 1 303 -10 803 268 78 70 chr20 215445 215922 -71937960 + MLT1L LTR MaLR 3 488 -127 1566 199 10 30 chr20 215922 216219 -71937663 + AluJo SINE Alu 1 291 -21 803 268 78 70 chr20 216219 216345 -71937537 + MLT1L LTR MaLR 488 611 -4 508 237 21 82 chr20 216355 216549 -71937333 + MLT1J LTR MaLR 330 511 0 2403 91 3 0 chr20 216680 216977 -71936905 - AluSp SINE Alu -15 298 1 784 301 96 16 chr20 217824 218368 -71935514 + L1M4 LINE L1 4117 4703 -1443 466 304 72 24 chr20 218383 218590 -71935292 + MER102a DNA MER1_type 108 324 -6 236 361 9 0 chr20 218739 218847 -71935035 - L2 LINE L2 -2482 832 724 2565 50 3 0 chr20 218998 219300 -71934582 + AluY SINE Alu 1 303 -8 266 222 198 24 chr20 219339 219465 -71934417 + MIR SINE MIR 96 243 -19 23 0 0 0 chr20 220117 220140 -71933742 + GC_rich Low_complexity Low_complexity 1 23 0 29 0 0 0 chr20 220249 220278 -71933604 + GC_rich Low_complexity Low_complexity 1 29 0 25 51 0 0 chr20 220407 220446 -71933436 + GC_rich Low_complexity Low_complexity 1 39 0 21 36 0 0 chr20 220651 220679 -71933203 + GC_rich Low_complexity Low_complexity 1 28 0 276 329 13 0 chr20 221774 221853 -71932029 + L2 LINE L2 3185 3264 -8 591 280 32 11 chr20 222093 222282 -71931600 - MIR3 SINE MIR 0 208 16 230 353 39 0 chr20 223126 223228 -71930654 + MER5B DNA MER1_type 66 171 -7 2373 93 0 0 chr20 224288 224579 -71929303 - AluSx SINE Alu -21 291 1 336 320 69 46 chr20 224607 224782 -71929100 - L2 LINE L2 -221 3051 2873 321 265 247 0 chr20 224878 225048 -71928834 - L2 LINE L2 0 3313 3102 947 326 64 29 chr20 225805 226364 -71927518 - L2 LINE L2 -513 2801 2223 595 212 72 63 chr20 226365 226587 -71927295 + MER112 DNA MER1_type 3 226 -34 322 319 47 0 chr20 226665 226834 -71927048 - L2 LINE L2 -1216 2098 1922 2582 44 7 0 chr20 226835 227130 -71926752 + AluY SINE Alu 1 297 -14 1535 132 0 14 chr20 227485 227697 -71926185 + AluSx SINE Alu 1 209 -103 4257 110 41 58 chr20 227763 228526 -71925356 + LTR1 LTR ERV1 36 785 0 598 106 0 21 chr20 228528 228622 -71925260 + AluSx SINE Alu 208 299 -13 1063 167 0 6 chr20 228842 229010 -71924872 - AluJo/FRAM SINE Alu -17 295 129 2307 60 0 106 chr20 229013 229361 -71924521 - AluY SINE Alu 0 311 1 476 176 0 38 chr20 229361 229492 -71924390 + CT-rich Low_complexity Low_complexity 1 126 0 760 201 145 52 chr20 229494 229743 -71924139 - AluJo SINE Alu 0 312 41 422 240 42 152 chr20 229772 229989 -71923893 + L1MC4a LINE L1 5834 6026 -1782 1741 165 33 0 chr20 230203 230508 -71923374 + AluJb SINE Alu 1 314 0 509 303 90 31 chr20 230763 231120 -71922762 + L2 LINE L2 2934 3311 -2 1553 269 95 15 chr20 231488 232034 -71921848 + MER115 DNA AcHobo 89 678 -15 475 248 65 13 chr20 232041 232194 -71921688 + MIR SINE MIR 63 223 -39 472 245 123 42 chr20 232346 232558 -71921324 - MIR SINE MIR -1 261 33 221 143 0 41 chr20 232732 232781 -71921101 + (TCCC)n Simple_repeat Simple_repeat 1 47 0 21 0 0 0 chr20 233326 233347 -71920535 + AT_rich Low_complexity Low_complexity 1 21 0 319 108 96 48 chr20 233861 233944 -71919938 - L1MC3 LINE L1 -6 7779 7693 1437 164 0 0 chr20 233949 234174 -71919708 - AluJb SINE Alu -4 308 84 885 157 8 111 chr20 234178 234413 -71919469 - L1MC3 LINE L1 -100 7685 7475 286 282 35 0 chr20 234488 234573 -71919309 - MLT1F1 LTR MaLR -443 124 37 2206 122 66 34 chr20 234574 234983 -71918899 - L1MC3 LINE L1 -687 7098 6677 213 39 0 0 chr20 234984 235010 -71918872 + (TCCC)n Simple_repeat Simple_repeat 1 26 0 282 191 0 0 chr20 235010 235057 -71918825 - Alu SINE Alu -11 290 244 269 160 0 0 chr20 235170 235220 -71918662 + MER97a DNA MER1_type? 45 94 -800 1401 150 8 43 chr20 235222 235456 -71918426 - AluJo SINE Alu -86 226 1 3095 178 64 31 chr20 235457 235861 -71918021 - L1MC3 LINE L1 -1093 6692 6303 2123 128 0 28 chr20 235861 236181 -71917701 - AluJb SINE Alu -1 311 1 3095 178 64 31 chr20 236181 236405 -71917477 - L1MC3 LINE L1 -1482 6303 5745 249 225 144 38 chr20 236405 236565 -71917317 - L1MB5 LINE L1 -122 6052 5876 210 268 98 18 chr20 236572 236684 -71917198 - MIR SINE MIR -69 193 73 927 181 23 0 chr20 236755 236926 -71916956 - FAM SINE Alu 0 175 1 240 232 18 18 chr20 236929 236985 -71916897 - Charlie5 DNA MER1_type -2547 65 10 2276 107 0 0 chr20 236993 237282 -71916600 - AluSc SINE Alu -20 289 1 904 179 0 0 chr20 237328 237473 -71916409 + FRAM SINE Alu 21 165 -11 1831 140 49 3 chr20 237509 237794 -71916088 - AluJo SINE Alu -5 307 10 2259 122 3 0 chr20 237797 238109 -71915773 - AluSp SINE Alu 0 313 1 2014 106 33 0 chr20 238334 238639 -71915243 - AluY SINE Alu 0 314 1 1936 149 17 3 chr20 238648 238937 -71914945 - AluJo SINE Alu -19 293 1 2040 128 12 53 chr20 238937 239336 -71914546 + L1MB8 LINE L1 5790 6172 -6 1934 150 3 14 chr20 239516 239810 -71914072 + AluJo SINE Alu 1 291 -21 498 296 18 6 chr20 239916 240085 -71913797 - L2 LINE L2 -252 3061 2891 438 240 7 52 chr20 240123 240153 -71913729 + L1ME LINE L1 5639 5669 -452 2190 112 11 0 chr20 240153 240280 -71913602 + AluSc SINE Alu 1 125 -184 2389 69 0 23 chr20 240280 240583 -71913299 + AluY SINE Alu 1 296 -15 2190 112 11 0 chr20 240583 240742 -71913140 + AluSc SINE Alu 125 290 -19 438 240 7 52 chr20 240742 240841 -71913041 + L1ME LINE L1 5669 5763 -358 1926 122 4 0 chr20 240841 241103 -71912779 + AluSq SINE Alu 35 297 -16 438 240 7 52 chr20 241103 241126 -71912756 + L1ME LINE L1 5763 5785 -336 1901 170 0 3 chr20 241277 241571 -71912311 + AluJb SINE Alu 1 293 -19 2265 98 0 17 chr20 241571 241868 -71912014 + AluSg SINE Alu 1 292 -18 2275 80 4 0 chr20 241968 242243 -71911639 + AluSx SINE Alu 1 276 -36 357 43 0 0 chr20 242243 242290 -71911592 + (CA)n Simple_repeat Simple_repeat 1 47 0 2262 110 3 0 chr20 242586 242878 -71911004 + AluSg SINE Alu 1 293 -17 2685 199 26 17 chr20 243044 243586 -71910296 - MLT1F1 LTR MaLR 0 567 21 2495 59 0 13 chr20 243587 243894 -71909988 + AluY SINE Alu 1 303 -8 571 269 161 34 chr20 244203 244349 -71909533 + L2 LINE L2 2911 3037 -276 1954 162 10 0 chr20 244349 244651 -71909231 - AluJb SINE Alu -7 305 1 571 269 161 34 chr20 244651 244666 -71909216 + L2 LINE L2 3037 3049 -264 1640 174 8 0 chr20 244666 244931 -71908951 - AluJo SINE Alu -45 267 1 571 269 161 34 chr20 244931 245121 -71908761 + L2 LINE L2 3049 3308 -5 1610 167 41 11 chr20 245389 245689 -71908193 - AluJb SINE Alu 0 314 7 1984 127 39 7 chr20 246153 246436 -71907446 - AluSx SINE Alu -16 296 5 402 258 86 0 chr20 246450 246578 -71907304 - MIR SINE MIR -14 248 110 33 85 0 0 chr20 248071 248153 -71905729 + GC_rich Low_complexity Low_complexity 1 82 0 33 25 0 0 chr20 248173 248213 -71905669 + GC_rich Low_complexity Low_complexity 1 40 0 31 26 0 0 chr20 248408 248446 -71905436 + GC_rich Low_complexity Low_complexity 1 38 0 30 69 0 0 chr20 248569 248627 -71905255 + GC_rich Low_complexity Low_complexity 1 58 0 22 56 0 0 chr20 248881 248917 -71904965 + GC_rich Low_complexity Low_complexity 1 36 0 23 0 0 0 chr20 248998 249021 -71904861 + GC_rich Low_complexity Low_complexity 1 23 0 25 0 0 0 chr20 249160 249185 -71904697 + GC_rich Low_complexity Low_complexity 1 25 0 195 114 0 0 chr20 249199 249234 -71904648 + (GGA)n Simple_repeat Simple_repeat 1 35 0 180 0 0 0 chr20 251127 251147 -71902735 + (T)n Simple_repeat Simple_repeat 1 20 0 579 248 189 4 chr20 251495 251765 -71902117 - MER102b DNA MER1_type -1 340 21 285 254 295 8 chr20 251802 251924 -71901958 + MIR SINE MIR 16 172 -90 706 264 100 47 chr20 252536 252877 -71901005 + LTR16A LTR ERVL 92 450 0 186 179 0 0 chr20 253212 253251 -71900631 + MIR SINE MIR 81 119 -89 1992 171 51 127 chr20 253561 254014 -71899868 - MLT1E1 LTR MaLR 0 654 273 2436 90 3 3 chr20 254014 254325 -71899557 + AluSx SINE Alu 1 311 -1 1992 171 51 127 chr20 254325 254579 -71899303 - MLT1E1 LTR MaLR -381 273 1 1029 174 0 34 chr20 254579 254755 -71899127 + AluJo SINE Alu 22 189 -123 1558 259 121 50 chr20 254760 255423 -71898459 + L2 LINE L2 2223 2982 -331 2062 123 3 7 chr20 255423 255724 -71898158 + AluSx SINE Alu 1 300 -12 1558 259 121 50 chr20 255724 255986 -71897896 + L2 LINE L2 2982 3224 -89 1770 148 7 20 chr20 256047 256345 -71897537 + AluJo SINE Alu 1 294 -18 319 364 52 44 chr20 256363 256613 -71897269 - L2 LINE L2 -26 3246 2995 1541 237 205 20 chr20 256613 257111 -71896771 + MLT1G LTR MaLR 1 590 0 829 173 0 0 chr20 257324 257457 -71896425 - FLAM_C SINE Alu 0 133 1 2134 121 0 0 chr20 257466 257763 -71896119 - AluSx SINE Alu -15 297 1 189 324 141 0 chr20 257765 257836 -71896046 + L2 LINE L2 2693 2773 -541 436 185 7 104 chr20 257989 258073 -71895809 + MIR3 SINE MIR 84 152 -56 2201 115 0 6 chr20 258073 258386 -71895496 - AluSx SINE Alu -1 311 1 436 185 7 104 chr20 258386 258436 -71895446 + MIR3 SINE MIR 152 205 -3 1214 56 11 11 chr20 258779 258957 -71894925 + (TTC)n Simple_repeat Simple_repeat 3 180 0 232 193 20 20 chr20 258968 258987 -71894895 - Alu SINE Alu -263 40 22 1666 109 4 0 chr20 258987 259225 -71894657 - AluSg/x SINE Alu 0 310 72 232 193 20 20 chr20 259225 259265 -71894617 - Alu SINE Alu -280 23 1 1887 146 0 10 chr20 259267 259568 -71894314 - AluSx SINE Alu -14 298 1 267 133 22 0 chr20 259568 259613 -71894269 - U6 snRNA snRNA -61 46 1 716 260 0 17 chr20 259655 259836 -71894046 - L2 LINE L2 0 3313 3136 476 239 89 33 chr20 259905 260085 -71893797 - LTR33A LTR ERVL -332 191 2 2225 78 3 0 chr20 260177 260459 -71893423 + AluSp SINE Alu 1 283 -30 4068 168 12 12 chr20 260513 261025 -71892857 - L1MB3 LINE L1 -11 6172 5658 1718 147 56 0 chr20 261025 261187 -71892695 - AluSx SINE Alu -11 301 115 390 21 0 0 chr20 261187 261234 -71892648 + (TG)n Simple_repeat Simple_repeat 2 48 0 1718 147 56 0 chr20 261234 261356 -71892526 - AluSx SINE Alu -197 115 1 4068 168 12 12 chr20 261356 261570 -71892312 - L1MB3 LINE L1 -524 5659 5446 1541 154 0 8 chr20 261616 261863 -71892019 - AluJo SINE Alu -47 265 21 2056 117 3 0 chr20 261939 262229 -71891653 + AluSq SINE Alu 1 291 -22 1229 91 24 62 chr20 262596 262806 -71891076 - AluSc SINE Alu -14 295 94 337 0 41 20 chr20 262806 262855 -71891027 + (TTTC)n Simple_repeat Simple_repeat 2 51 0 1967 134 40 0 chr20 262860 263158 -71890724 - AluSx SINE Alu 0 312 3 664 317 66 8 chr20 263282 263525 -71890357 - MIR SINE MIR 0 262 6 195 162 0 0 chr20 263722 263759 -71890123 + (CA)n Simple_repeat Simple_repeat 1 37 0 247 305 98 18 chr20 263800 263964 -71889918 + L2 LINE L2 1853 2029 -1285 368 141 16 0 chr20 264115 264179 -71889703 - AluJo SINE Alu -3 299 235 901 159 0 59 chr20 264179 264349 -71889533 - AluJo SINE Alu -152 160 1 741 237 133 37 chr20 264349 264807 -71889075 + MLT1G LTR MaLR 19 538 -4 976 236 167 25 chr20 264816 265134 -71888748 - MLT1A1 LTR MaLR -2 363 1 2326 97 0 3 chr20 265215 265526 -71888356 - AluSg SINE Alu 0 310 1 1235 275 154 9 chr20 265526 265974 -71887908 + MLT1K LTR MaLR 34 546 -42 300 70 0 0 chr20 266195 266238 -71887644 + (TC)n Simple_repeat Simple_repeat 1 43 0 2296 77 0 13 chr20 266424 266724 -71887158 + AluSc SINE Alu 1 296 -13 309 423 621 0 chr20 266839 267009 -71886873 - L1MC4a LINE L1 -302 5819 5795 2192 211 42 84 chr20 267009 267257 -71886625 - MLT1G LTR MaLR 0 590 333 1841 85 8 0 chr20 267257 267505 -71886377 - AluSx SINE Alu -62 250 1 2192 211 42 84 chr20 267505 267872 -71886010 - MLT1G LTR MaLR -257 333 1 309 423 621 0 chr20 267872 267934 -71885948 - L1MC4a LINE L1 -326 5795 5685 582 338 87 0 chr20 267934 268200 -71885682 + L2 LINE L2 2564 2852 -462 276 30 0 0 chr20 268242 268275 -71885607 + (CA)n Simple_repeat Simple_repeat 1 33 0 188 167 103 90 chr20 268275 268353 -71885529 + MIR SINE MIR 184 262 0 278 240 27 13 chr20 268364 268439 -71885443 - L2 LINE L2 -9 3304 3229 2068 134 0 6 chr20 268452 268766 -71885116 + AluJb SINE Alu 1 312 0 196 379 0 0 chr20 268896 268962 -71884920 - MIR SINE MIR -85 123 58 22 35 0 0 chr20 269663 269692 -71884190 + GC_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr20 270493 270514 -71883368 + GC_rich Low_complexity Low_complexity 1 21 0 396 0 0 0 chr20 271094 271138 -71882744 + (TG)n Simple_repeat Simple_repeat 2 45 0 587 341 0 0 chr20 271811 271978 -71881904 - MIR SINE MIR -83 179 13 236 210 48 0 chr20 272002 272064 -71881818 - MIR SINE MIR -11 251 187 228 222 25 62 chr20 272534 272615 -71881267 - MLT1K LTR MaLR -1 587 510 2118 109 3 10 chr20 272677 272802 -71881080 + AluSx SINE Alu 11 135 -177 2106 105 0 20 chr20 272802 273108 -71880774 + AluSg SINE Alu 1 300 -10 2118 109 3 10 chr20 273108 273286 -71880596 + AluSx SINE Alu 135 312 0 1995 126 0 0 chr20 273576 273861 -71880021 + AluSq SINE Alu 21 305 -8 1860 159 10 0 chr20 273874 274170 -71879712 + AluJo SINE Alu 13 311 -1 709 228 95 4 chr20 274188 274429 -71879453 + L1M4 LINE L1 4363 4625 -1521 185 129 0 0 chr20 274434 274465 -71879417 + L2 LINE L2 3023 3053 -260 279 319 129 0 chr20 274596 274712 -71879170 - MLT1K LTR MaLR -290 298 168 273 204 86 32 chr20 275097 275190 -71878692 - L2 LINE L2 -16 3256 3159 619 250 42 118 chr20 275205 275537 -71878345 - L2 LINE L2 0 3272 2966 235 308 13 0 chr20 276531 276609 -71877273 + MIR3 SINE MIR 82 160 -48 214 294 98 10 chr20 276813 276915 -71876967 - MIR SINE MIR -62 146 36 364 282 114 0 chr20 277536 277609 -71876273 - MIR SINE MIR -20 242 179 2157 109 3 0 chr20 277609 277913 -71875969 - AluSx SINE Alu -5 307 3 364 282 114 0 chr20 277913 277970 -71875912 - MIR SINE MIR -83 179 97 2269 64 0 58 chr20 277978 278307 -71875575 - AluY SINE Alu -1 310 1 1871 135 22 16 chr20 278317 278629 -71875253 - L1PB2 LINE L1 0 6151 5838 2238 100 0 0 chr20 278670 278969 -71874913 + AluSx SINE Alu 1 299 -13 334 277 25 34 chr20 279139 279258 -71874624 - MIR SINE MIR 0 262 145 * 1486 248 109 53 chr20 279250 280039 -71873843 + L2 LINE L2 2240 3074 -239 2278 97 3 0 chr20 280043 280354 -71873528 + AluSp SINE Alu 1 312 -1 2133 121 0 0 chr20 280366 280664 -71873218 + AluSx SINE Alu 1 298 -14 280 240 146 12 chr20 280689 280864 -71873018 + L1ME LINE L1 5571 5783 -338 1237 122 148 97 chr20 280865 281143 -71872739 + AluJo SINE Alu 1 292 -20 2048 101 50 0 chr20 281176 281474 -71872408 - AluSp SINE Alu 0 313 1 1006 146 5 61 chr20 281477 281632 -71872250 + L1MD3 LINE L1 7077 7218 -777 728 181 0 8 chr20 281632 281759 -71872123 - FLAM_A SINE Alu -7 126 1 1006 146 5 61 chr20 281759 281816 -71872066 + L1MD3 LINE L1 7218 7277 -718 640 240 0 0 chr20 281817 281942 -71871940 + MLT1F1 LTR MaLR 1 125 -442 1501 176 95 0 chr20 281942 282238 -71871644 + L1MD3 LINE L1 7404 7727 -268 406 200 20 59 chr20 282222 282323 -71871559 + L1MD3 LINE L1 6260 6351 -8 * 2278 96 0 0 chr20 282326 282627 -71871255 + AluSx SINE Alu 1 301 -11 2180 84 7 10 chr20 283020 283317 -71870565 - AluSp SINE Alu -17 296 1 401 275 101 57 chr20 283483 283664 -71870218 + MIR SINE MIR 67 262 0 257 364 11 0 chr20 283712 283800 -71870082 - L2 LINE L2 -68 3204 3116 584 308 87 0 chr20 283877 284072 -71869810 - MIR SINE MIR -21 241 30 2179 104 19 10 chr20 284512 284821 -71869061 + AluSx SINE Alu 1 312 0 255 294 176 0 chr20 284821 284923 -71868959 - MIR3 SINE MIR -85 123 4 197 222 16 0 chr20 285482 285545 -71868337 + (TGAA)n Simple_repeat Simple_repeat 3 66 0 1645 149 34 0 chr20 285563 285859 -71868023 - AluJb SINE Alu 0 311 7 250 327 73 0 chr20 285869 285979 -71867903 - L2 LINE L2 0 3272 3155 227 269 0 0 chr20 286094 286146 -71867736 + (TG)n Simple_repeat Simple_repeat 1 52 0 275 263 111 0 chr20 286580 286679 -71867203 + MIR SINE MIR 81 190 -72 1048 252 87 47 chr20 286955 287088 -71866794 - L2 LINE L2 -1 3312 3186 2059 115 0 10 chr20 287088 287392 -71866490 + AluSx SINE Alu 1 301 -11 1048 252 87 47 chr20 287392 287682 -71866200 - L2 LINE L2 -127 3186 2872 592 304 40 9 chr20 288367 288404 -71865478 + L1MC4a LINE L1 5406 5440 -2368 2160 83 0 14 chr20 288404 288694 -71865188 - AluSq SINE Alu -4 309 24 592 304 40 9 chr20 288694 288883 -71864999 + L1MC4a LINE L1 5440 5639 -2169 588 82 0 0 chr20 288921 289020 -71864862 + AluSp/q SINE Alu 211 309 0 774 259 50 29 chr20 289020 289314 -71864568 + L1MC4a LINE L1 5628 5945 -297 236 63 32 79 chr20 289460 289523 -71864359 + (TATAA)n Simple_repeat Simple_repeat 4 63 0 2105 91 0 7 chr20 289538 289860 -71864022 + AluSp SINE Alu 3 322 0 220 329 0 14 chr20 289968 290041 -71863841 + MIR SINE MIR 42 113 -95 2714 247 146 37 chr20 290354 290493 -71863389 + L2 LINE L2 1693 1815 -1498 1989 130 3 0 chr20 290493 290777 -71863105 - AluJb SINE Alu -27 285 1 2714 247 146 37 chr20 290777 290885 -71862997 + L2 LINE L2 1815 1910 -1403 2284 97 0 3 chr20 290885 291193 -71862689 - AluSc SINE Alu -2 307 1 2714 247 146 37 chr20 291193 291846 -71862036 + L2 LINE L2 1910 2491 -822 763 197 0 29 chr20 291846 291983 -71861899 + AluJo/FLAM SINE Alu 1 133 -169 2247 95 3 3 chr20 291985 292290 -71861592 + AluSx SINE Alu 1 305 -7 2714 247 146 37 chr20 292290 292705 -71861177 + L2 LINE L2 2491 2859 -454 1835 162 0 3 chr20 292705 293007 -71860875 - AluJb SINE Alu -11 301 1 2714 247 146 37 chr20 293007 293134 -71860748 + L2 LINE L2 2859 3313 0 614 264 35 25 chr20 293310 293507 -71860375 - L2 LINE L2 -1 3312 3114 225 83 0 0 chr20 294732 294768 -71859114 + (GGAA)n Simple_repeat Simple_repeat 3 38 0 534 277 40 30 chr20 295100 295152 -71858730 + MIR SINE MIR 11 61 -201 2004 107 21 0 chr20 295152 295433 -71858449 + AluSx SINE Alu 1 287 -25 534 277 40 30 chr20 295433 295582 -71858300 + MIR SINE MIR 61 214 -48 306 220 0 77 chr20 295692 295783 -71858099 - MIR SINE MIR 0 262 179 1044 174 0 0 chr20 295808 295975 -71857907 + AluJb SINE Alu 137 303 -9 192 77 0 0 chr20 295976 296002 -71857880 + (GGAA)n Simple_repeat Simple_repeat 1 26 0 324 316 86 7 chr20 296027 296166 -71857716 - MIR SINE MIR -85 177 28 * 396 279 105 23 chr20 296112 296284 -71857598 + MIR SINE MIR 11 196 -66 955 270 15 68 chr20 296588 296627 -71857255 + MER113 DNA MER1_type? 73 113 -408 275 48 0 24 chr20 296627 296669 -71857213 + (TTTA)n Simple_repeat Simple_repeat 4 44 0 1913 147 0 0 chr20 296669 296948 -71856934 - AluSx SINE Alu -33 279 1 955 270 15 68 chr20 296948 297191 -71856691 + MER113 DNA MER1_type? 112 366 -155 2054 88 36 20 chr20 297191 297311 -71856571 + AluY SINE Alu 1 118 -193 186 43 0 0 chr20 297311 297334 -71856548 + (CAA)n Simple_repeat Simple_repeat 2 24 0 2054 88 36 20 chr20 297334 297519 -71856363 + AluY SINE Alu 118 311 0 955 270 15 68 chr20 297519 297538 -71856344 + MER113 DNA MER1_type? 366 384 -137 2233 98 3 0 chr20 297538 297844 -71856038 + AluY SINE Alu 1 307 -4 955 270 15 68 chr20 297844 298013 -71855869 + MER113 DNA MER1_type? 384 521 0 301 284 17 60 chr20 298022 298138 -71855744 - MIR3 SINE MIR -48 160 50 1906 132 0 16 chr20 298351 298686 -71855196 + AluSx SINE Alu 1 312 0 612 203 23 0 chr20 298856 298984 -71854898 - MIR SINE MIR -44 218 88 250 280 40 0 chr20 299038 299113 -71854769 - MIR SINE MIR -68 194 117 2349 147 45 33 chr20 299248 299670 -71854212 - MSTC LTR MaLR -1 427 1 378 197 0 51 chr20 299670 299757 -71854125 + Charlie5 DNA MER1_type 18 99 -2525 2159 119 0 0 chr20 299757 300060 -71853822 - AluSg SINE Alu -7 303 1 378 197 0 51 chr20 300060 300089 -71853793 + Charlie5 DNA MER1_type 99 128 -2496 210 256 93 116 chr20 300236 300282 -71853600 + MIR SINE MIR 24 70 -192 2201 98 7 3 chr20 300282 300588 -71853294 - AluSq SINE Alu -6 307 1 210 256 93 116 chr20 300588 300670 -71853212 + MIR SINE MIR 70 149 -113 312 323 31 0 chr20 300887 300983 -71852899 + L2 LINE L2 3136 3234 -38 1825 138 7 3 chr20 301299 301613 -71852269 - AluY SINE Alu 0 315 1 1547 199 13 0 chr20 301623 301930 -71851952 - AluJo SINE Alu -1 311 1 2292 86 10 0 chr20 301997 302298 -71851584 + AluSp SINE Alu 1 304 -9 794 308 43 0 chr20 302424 302658 -71851224 - MIR SINE MIR -17 245 2 222 320 78 39 chr20 302924 303014 -71850868 - MIR SINE MIR -64 198 100 2564 30 3 0 chr20 303014 303318 -71850564 + AluY SINE Alu 1 305 -6 222 320 78 39 chr20 303318 303355 -71850527 - MIR SINE MIR -162 100 66 21 0 0 0 chr20 303428 303449 -71850433 + GC_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr20 303738 303759 -71850123 + GC_rich Low_complexity Low_complexity 1 21 0 23 54 0 0 chr20 303807 303844 -71850038 + GC_rich Low_complexity Low_complexity 1 37 0 267 31 0 0 chr20 304709 304741 -71849141 + (TG)n Simple_repeat Simple_repeat 1 32 0 530 282 56 39 chr20 305199 305433 -71848449 - MIR SINE MIR -2 260 23 675 272 75 54 chr20 305773 306049 -71847833 - L1MC4a LINE L1 -1924 5884 5597 1413 196 41 0 chr20 306049 306349 -71847533 - AluJo SINE Alu 0 311 1 675 272 75 54 chr20 306349 306420 -71847462 - L1MC4a LINE L1 -2211 5597 5529 270 304 131 52 chr20 306543 306897 -71846985 + L2 LINE L2 2395 2720 -594 1415 247 122 26 chr20 306897 306966 -71846916 - MLT1J LTR MaLR 0 511 450 2310 98 0 0 chr20 306966 307271 -71846611 - AluSc SINE Alu -4 305 1 1415 247 122 26 chr20 307271 307667 -71846215 - MLT1J LTR MaLR -61 450 1 270 304 131 52 chr20 307667 307713 -71846169 + L2 LINE L2 2720 2761 -553 2306 97 0 0 chr20 307713 308022 -71845860 - AluSp SINE Alu -4 309 1 270 304 131 52 chr20 308022 308117 -71845765 + L2 LINE L2 2761 2930 -384 744 181 103 0 chr20 308137 308292 -71845590 + MER5A DNA MER1_type 19 189 0 332 314 48 8 chr20 308317 308441 -71845441 + L2 LINE L2 2985 3113 -159 1747 148 20 33 chr20 308470 308773 -71845109 - AluJb SINE Alu -13 299 1 1203 102 0 0 chr20 309028 309185 -71844697 - AluSg/x SINE Alu -22 288 132 1931 103 4 0 chr20 309185 309448 -71844434 - AluSg SINE Alu -15 295 32 1198 111 0 12 chr20 309488 309660 -71844222 - AluSg SINE Alu -140 170 1 1216 187 21 17 chr20 309703 309938 -71843944 + AluJo SINE Alu 1 236 -76 1081 277 34 47 chr20 309995 310056 -71843826 - L1MC4a LINE L1 -1838 5970 5910 596 163 106 41 chr20 310056 310179 -71843703 + FLAM_A SINE Alu 1 131 -2 1081 277 34 47 chr20 310179 310561 -71843321 - L1MC4a LINE L1 -1898 5910 5533 355 317 42 6 chr20 311172 311339 -71842543 - L2 LINE L2 -264 3008 2836 302 299 0 21 chr20 311453 311550 -71842332 - MIR3 SINE MIR -33 175 81 611 291 27 18 chr20 311712 311932 -71841950 - MIR SINE MIR -19 243 22 406 255 161 0 chr20 312505 312654 -71841228 - L2 LINE L2 0 3313 3141 2369 84 0 3 chr20 312654 312964 -71840918 + AluSq SINE Alu 1 309 -4 494 270 172 47 chr20 313298 313329 -71840553 + MIR SINE MIR 5 31 -231 2249 108 0 0 chr20 313329 313634 -71840248 + AluSx SINE Alu 1 305 -7 494 270 172 47 chr20 313634 313817 -71840065 + MIR SINE MIR 31 246 -16 2286 97 0 0 chr20 314349 314647 -71839235 + AluSx SINE Alu 1 298 -14 750 163 81 12 chr20 314758 314918 -71838964 - MIR SINE MIR -74 188 18 197 256 125 0 chr20 314954 315028 -71838854 + MIR SINE MIR 73 156 -52 2081 123 0 3 chr20 315167 315467 -71838415 - AluSx SINE Alu -13 299 1 2607 192 88 40 chr20 315647 315947 -71837935 - L1MC4a LINE L1 0 7808 7524 1824 133 54 0 chr20 315947 316226 -71837656 - AluJo SINE Alu -18 294 1 2607 192 88 40 chr20 316226 316628 -71837254 - L1MC4a LINE L1 -284 7524 7072 2141 101 47 0 chr20 316628 316924 -71836958 - AluSg SINE Alu 0 310 1 1929 152 3 7 chr20 317122 317425 -71836457 + AluJo SINE Alu 11 312 0 486 248 36 15 chr20 317433 317570 -71836312 + MIR3 SINE MIR 6 145 -63 2047 117 3 7 chr20 317772 318070 -71835812 - AluJb SINE Alu -15 297 1 261 246 58 0 chr20 318597 318666 -71835216 + MIR SINE MIR 72 144 -118 405 228 22 11 chr20 319480 319572 -71834310 - L2 LINE L2 -24 3289 3197 336 243 37 37 chr20 320389 320525 -71833357 - MLT1L LTR MaLR -48 567 432 993 201 56 26 chr20 320618 320852 -71833030 + MIR SINE MIR 12 252 -10 2209 66 3 30 chr20 320858 321160 -71832722 + AluSg SINE Alu 1 294 -16 379 236 22 0 chr20 321193 321282 -71832600 - MLT1L LTR MaLR -344 271 181 416 208 27 167 chr20 321427 321580 -71832302 + MLT1H LTR MaLR 360 474 -75 2237 81 0 28 chr20 321580 321900 -71831982 - AluSx SINE Alu -1 311 1 416 208 27 167 chr20 321900 321967 -71831915 + MLT1H LTR MaLR 474 549 0 336 333 56 0 chr20 322208 322316 -71831566 - MIR SINE MIR -69 193 80 2236 91 0 0 chr20 322416 322713 -71831169 + AluSx SINE Alu 1 297 -15 303 266 245 29 chr20 322944 323083 -71830799 - L2 LINE L2 0 3272 3104 295 197 167 0 chr20 323149 323215 -71830667 + MLT1J2 LTR MaLR 67 143 -307 341 235 136 15 chr20 323290 323422 -71830460 + MLT1J2 LTR MaLR 299 446 -4 469 284 297 3 chr20 323510 323823 -71830059 - MLT1H LTR MaLR -72 477 73 3152 159 23 14 chr20 323850 324016 -71829866 - MER44D DNA MER2_type -1882 705 542 2450 75 0 0 chr20 324016 324324 -71829558 + AluSc SINE Alu 1 308 -1 3152 159 23 14 chr20 324324 324773 -71829109 - MER44D DNA MER2_type -2045 542 8 778 93 0 0 chr20 325011 325118 -71828764 + AluSp/q SINE Alu 207 313 0 1493 143 42 23 chr20 325124 325389 -71828493 - AluJo SINE Alu -31 281 12 460 289 102 0 chr20 325407 325573 -71828309 + MER5A DNA MER1_type 7 189 0 608 235 184 0 chr20 325789 325985 -71827897 + L2 LINE L2 3082 3313 0 218 328 0 0 chr20 326044 326105 -71827777 - MIR SINE MIR -19 243 183 2454 206 23 15 chr20 326114 326637 -71827245 + MLT1F LTR MaLR 16 542 0 511 268 33 13 chr20 326638 326791 -71827091 - MIR SINE MIR -78 184 29 624 290 65 81 chr20 326952 327052 -71826830 + L1MEd LINE L1 800 900 -5305 2064 101 0 10 chr20 327052 327350 -71826532 + AluSq SINE Alu 1 295 -18 624 290 65 81 chr20 327350 327483 -71826399 + L1MEd LINE L1 900 1034 -5171 2137 89 0 7 chr20 327483 327765 -71826117 + AluSq SINE Alu 1 280 -33 288 0 0 0 chr20 327765 327797 -71826085 + (CA)n Simple_repeat Simple_repeat 1 32 0 624 290 65 81 chr20 327797 327871 -71826011 + L1MEd LINE L1 1032 1104 -5101 361 223 210 64 chr20 327868 328025 -71825857 + L1MEd LINE L1 1333 1512 -4884 * 285 147 35 198 chr20 328048 328164 -71825718 + L1MB7 LINE L1 5814 5910 -264 498 92 0 0 chr20 328174 328239 -71825643 - AluJb SINE Alu -20 292 228 1129 119 0 0 chr20 328239 328398 -71825484 - AluJb SINE Alu -149 163 5 1028 178 40 36 chr20 328403 328541 -71825341 + L1MB7 LINE L1 5909 6045 -139 2050 148 0 0 chr20 328541 328852 -71825030 - AluSx SINE Alu -1 311 1 1028 178 40 36 chr20 328852 328988 -71824894 + L1MB7 LINE L1 6045 6184 0 1521 127 107 8 chr20 329089 329342 -71824540 + AluJo SINE Alu 29 306 -6 233 186 0 0 chr20 329346 329389 -71824493 - MER5B DNA MER1_type -135 43 1 1010 296 125 23 chr20 329447 330188 -71823694 - L2 LINE L2 0 3313 2476 192 310 36 0 chr20 330326 330435 -71823447 + MIR SINE MIR 80 140 -68 405 50 30 69 chr20 330543 330644 -71823238 + (CCCCG)n Simple_repeat Simple_repeat 2 98 0 788 278 200 10 chr20 331711 332218 -71821664 + L2 LINE L2 2698 3313 0 259 326 0 11 chr20 332285 332374 -71821508 - L2 LINE L2 -213 3059 2972 471 303 58 0 chr20 332690 332845 -71821037 + MIR SINE MIR 19 182 -80 604 293 156 50 chr20 332897 333256 -71820626 - MLT1J LTR MaLR -88 423 27 181 262 131 0 chr20 333272 333333 -71820549 + MIR SINE MIR 179 247 -15 4388 162 44 39 chr20 333444 333807 -71820075 - L1MB7 LINE L1 0 6184 5824 1455 191 23 43 chr20 333807 333961 -71819921 - AluJo SINE Alu -19 293 146 2324 64 0 3 chr20 333961 334257 -71819625 - AluY SINE Alu -16 295 1 1455 191 23 43 chr20 334257 334401 -71819481 - AluJo SINE Alu -166 146 1 4388 162 44 39 chr20 334401 334910 -71818972 - L1MB7 LINE L1 -360 5824 5319 2127 100 10 3 chr20 334910 335209 -71818673 - AluSx SINE Alu -11 301 1 4388 162 44 39 chr20 335209 336011 -71817871 - L1MB7 LINE L1 -865 5319 4515 342 200 111 22 chr20 336014 336104 -71817778 - HAL1b LINE L1 -442 906 809 203 250 0 0 chr20 336249 336289 -71817593 + MER5A DNA MER1_type 70 109 -80 1261 209 62 4 chr20 336750 337008 -71816874 + AluJb SINE Alu 30 302 -10 337 214 125 0 chr20 337491 337603 -71816279 - HAL1 LINE L1 -838 1669 1544 643 250 122 39 chr20 337603 337684 -71816198 - L1MC5 LINE L1 -176 7785 7712 1676 174 27 3 chr20 337684 337982 -71815900 + AluJo SINE Alu 1 305 -7 643 250 122 39 chr20 337982 338266 -71815616 - L1MC5 LINE L1 -249 7712 7376 2098 174 62 10 chr20 338266 338669 -71815213 - MSTA LTR MaLR 0 428 5 643 250 122 39 chr20 338669 338738 -71815144 - L1MC5 LINE L1 -585 7376 7314 2131 68 0 18 chr20 338745 339024 -71814858 - AluY SINE Alu -11 300 27 396 359 92 9 chr20 339032 339249 -71814633 - HAL1 LINE L1 -1428 1079 845 1525 170 40 7 chr20 339308 339585 -71814297 + AluJb SINE Alu 1 286 -26 660 244 51 15 chr20 339605 339802 -71814080 + MIR SINE MIR 56 259 -3 218 307 123 9 chr20 339810 339924 -71813958 - L2 LINE L2 -448 2866 2740 252 0 0 0 chr20 339986 340014 -71813868 + (TG)n Simple_repeat Simple_repeat 1 28 0 230 246 0 29 chr20 340247 340316 -71813566 + CT-rich Low_complexity Low_complexity 1 67 0 295 210 51 27 chr20 340718 340830 -71813052 + MIR SINE MIR 43 156 -78 1536 183 210 44 chr20 340855 340962 -71812920 - L1MC4 LINE L1 0 8042 7954 2539 37 0 0 chr20 340962 341258 -71812624 - AluY SINE Alu -15 296 1 1536 183 210 44 chr20 341258 341692 -71812190 - L1MC4 LINE L1 -88 7954 7411 326 47 0 82 chr20 343366 343451 -71810431 + (CCCCCA)n Simple_repeat Simple_repeat 6 83 0 329 326 42 0 chr20 343829 343973 -71809909 - MIR SINE MIR -67 195 46 250 272 233 26 chr20 344155 344664 -71809218 - L2 LINE L2 -84 3229 2553 661 162 0 0 chr20 345022 345127 -71808755 - FLAM_C SINE Alu -1 142 38 300 313 114 20 chr20 345223 345255 -71808627 + MIR SINE MIR 3 31 -231 1577 139 56 63 chr20 345255 345557 -71808325 + AluJb SINE Alu 1 300 -12 300 313 114 20 chr20 345557 345725 -71808157 + MIR SINE MIR 31 222 -40 2204 81 3 0 chr20 345727 346011 -71807871 + AluSp SINE Alu 3 287 -26 321 221 139 0 chr20 346057 346143 -71807739 - MLT1H LTR MaLR 0 595 498 1207 142 25 0 chr20 346245 346449 -71807433 - MER2 DNA MER2_type -135 210 2 546 251 93 57 chr20 346451 346785 -71807097 - MLT1H LTR MaLR -96 453 108 307 244 56 0 chr20 346918 347008 -71806874 + MIR3 SINE MIR 66 160 -48 2254 102 0 0 chr20 347715 348018 -71805864 - AluSx SINE Alu -9 303 1 324 263 38 2 chr20 348040 348152 -71805730 - L1ME2 LINE L1 -5 6161 6045 353 345 60 32 chr20 348275 348331 -71805551 - L1ME LINE L1 -382 5739 5686 2145 123 0 0 chr20 348331 348632 -71805250 - AluSg SINE Alu -9 301 1 353 345 60 32 chr20 348632 348781 -71805101 - L1ME LINE L1 -435 5686 5523 3450 116 41 0 chr20 348781 349298 -71804584 - L1MA2 LINE L1 0 6304 5767 353 345 60 32 chr20 349298 349343 -71804539 - L1ME LINE L1 -598 5523 5481 911 78 39 0 chr20 349349 349477 -71804405 - L1MB3 LINE L1 0 6183 6051 1583 174 3 43 chr20 349524 349846 -71804036 - AluJo SINE Alu -3 309 1 210 342 26 13 chr20 350361 350513 -71803369 + (CCCCAG)n Simple_repeat Simple_repeat 5 158 0 346 203 0 0 chr20 350922 350981 -71802901 + AluSp SINE Alu 131 189 -114 212 113 170 19 chr20 350999 351052 -71802830 + MIR SINE MIR 83 143 -65 1338 201 108 25 chr20 351860 351934 -71801948 + MER58B DNA MER1_type 2 68 -2352 2325 78 3 0 chr20 351934 352228 -71801654 - AluSp SINE Alu -13 300 6 1338 201 108 25 chr20 352228 352467 -71801415 + MER58B DNA MER1_type 68 341 0 520 314 69 16 chr20 352470 352715 -71801167 + MIR SINE MIR 5 262 0 476 250 74 69 chr20 354743 354959 -71798923 + Charlie8 DNA MER1_type 49 265 -2152 445 244 76 130 chr20 356360 356675 -71797207 - MER21B LTR ERV1 -158 705 408 2387 63 7 0 chr20 356709 357009 -71796873 - AluSq SINE Alu -11 302 1 443 213 53 142 chr20 357070 357295 -71796587 - MER21B LTR ERV1 -658 205 1 2664 170 147 98 chr20 357898 358769 -71795113 - MER21A LTR ERV1 -17 914 1 2217 106 0 3 chr20 359538 359849 -71794033 + AluSx SINE Alu 1 310 -2 454 161 43 11 chr20 362687 362780 -71791102 - MER103 DNA DNA -57 109 14 2066 103 10 3 chr20 363517 363809 -71790073 + AluSp SINE Alu 2 295 -18 21 0 0 0 chr20 363824 363845 -71790037 + AT_rich Low_complexity Low_complexity 1 21 0 1555 221 107 94 chr20 364927 365523 -71788359 + L1MC4 LINE L1 7323 7931 -111 2194 77 0 10 chr20 365523 365820 -71788062 + AluY SINE Alu 1 294 -17 1555 221 107 94 chr20 365820 365934 -71787948 + L1MC4 LINE L1 7931 8042 0 2035 98 7 24 chr20 366559 366854 -71787028 + AluSq SINE Alu 11 300 -13 182 156 22 0 chr20 367258 367303 -71786579 + (TTTA)n Simple_repeat Simple_repeat 3 48 0 2067 114 14 0 chr20 369056 369346 -71784536 - AluSx SINE Alu -16 296 3 1319 190 133 0 chr20 369376 369639 -71784243 - AluJo SINE Alu -4 298 1 2094 104 0 41 chr20 369651 369967 -71783915 - AluSg1 SINE Alu -6 303 1 759 289 191 48 chr20 370537 371602 -71782280 + L2 LINE L2 1758 2974 -340 236 200 53 80 chr20 371786 371861 -71782021 + L2 LINE L2 3185 3257 -15 206 326 128 29 chr20 372009 372181 -71781701 + L3 LINE CR1 875 1063 -514 225 301 62 35 chr20 372347 372460 -71781422 + MIR3 SINE MIR 93 208 0 212 287 121 57 chr20 372986 373474 -71780408 + L2 LINE L2 1697 2215 -1099 776 216 24 61 chr20 373505 373718 -71780164 + MER58A DNA MER1_type 19 223 -1 2265 101 0 3 chr20 374058 374364 -71779518 - AluSx SINE Alu -7 305 1 278 280 0 47 chr20 374440 374547 -71779335 + L2 LINE L2 2992 3093 -179 2176 97 0 3 chr20 374895 375194 -71778688 - AluSq SINE Alu -15 298 1 335 323 31 0 chr20 375493 375589 -71778293 + L2 LINE L2 3136 3234 -38 1812 106 25 21 chr20 375905 376219 -71777663 - AluY SINE Alu 0 315 1 413 251 29 12 chr20 376249 376420 -71777462 - AluJb SINE Alu -21 291 118 333 287 61 17 chr20 376585 376700 -71777182 - L1M4 LINE L1 -2946 3200 3081 289 368 0 23 chr20 376709 376842 -71777040 + CT-rich Low_complexity Low_complexity 6 135 0 2164 119 0 6 chr20 376980 377292 -71776590 + AluSx SINE Alu 3 312 0 2259 94 0 0 chr20 378011 378309 -71775573 + AluSg SINE Alu 1 298 -12 653 193 0 0 chr20 378309 378423 -71775459 - FLAM_A SINE Alu -18 115 2 2024 92 13 23 chr20 378444 378747 -71775135 - AluSg SINE Alu -10 300 1 995 63 0 0 chr20 378756 378882 -71775000 - AluSc SINE Alu -12 297 172 180 0 0 0 chr20 378888 378908 -71774974 + (A)n Simple_repeat Simple_repeat 1 20 0 2239 101 0 3 chr20 378917 379225 -71774657 + AluSg SINE Alu 1 307 -3 340 291 0 12 chr20 379233 379319 -71774563 + MIR SINE MIR 38 122 -86 2055 106 17 0 chr20 379756 380048 -71773834 - AluSx SINE Alu -15 297 1 623 82 41 20 chr20 380265 380363 -71773519 + HY3 scRNA scRNA 1 100 -1 2076 99 0 10 chr20 380865 381177 -71772705 + AluSx SINE Alu 1 309 0 423 189 0 14 chr20 381337 381411 -71772471 - AluJb SINE Alu -28 284 212 2042 112 0 7 chr20 381629 381933 -71771949 + AluSg SINE Alu 1 302 -8 1465 176 49 4 chr20 381949 382216 -71771666 + AluJo SINE Alu 1 279 -33 2174 89 13 22 chr20 382470 382786 -71771096 + AluSp SINE Alu 1 313 0 2211 75 0 26 chr20 382793 383101 -71770781 + AluSp SINE Alu 1 300 -13 829 88 7 73 chr20 383117 383143 -71770739 + AluSq/x SINE Alu 10 36 -277 2224 94 3 19 chr20 383143 383451 -71770431 - AluSg SINE Alu -7 303 1 829 88 7 73 chr20 383451 383560 -71770322 + AluSq/x SINE Alu 36 136 -177 2145 78 20 10 chr20 383560 383854 -71770028 + AluY SINE Alu 1 297 -14 1767 133 14 14 chr20 384252 384573 -71769309 - AluSx SINE Alu 0 321 1 538 213 0 71 chr20 384777 384918 -71768964 - MER94 DNA DNA 0 134 4 2030 122 0 0 chr20 384954 385249 -71768633 + AluSx SINE Alu 18 312 0 2324 90 3 0 chr20 385252 385562 -71768320 + AluSq SINE Alu 1 311 -2 1118 182 146 16 chr20 385608 385861 -71768021 + AluSx SINE Alu 12 297 -15 198 103 0 0 chr20 385939 385968 -71767914 + (TTCA)n Simple_repeat Simple_repeat 4 32 0 324 310 138 85 chr20 385983 386159 -71767723 - L2 LINE L2 -1 3271 3106 2190 101 0 7 chr20 386159 386467 -71767415 - AluSq SINE Alu -7 306 1 324 310 138 85 chr20 386467 386526 -71767356 - L2 LINE L2 -166 3106 3052 2353 88 3 0 chr20 386526 386834 -71767048 - AluSp SINE Alu -4 309 1 1442 165 91 11 chr20 386835 387120 -71766762 - AluJo SINE Alu -4 308 1 324 310 138 85 chr20 387120 387281 -71766601 - L2 LINE L2 -219 3053 2851 1762 137 23 23 chr20 387913 388212 -71765670 - AluJb SINE Alu -13 299 1 225 0 0 0 chr20 389238 389263 -71764619 + (TTTA)n Simple_repeat Simple_repeat 4 28 0 445 209 9 45 chr20 389263 389366 -71764516 - MER31A LTR ERV1 -32 453 353 848 162 0 7 chr20 389903 390051 -71763831 + FRAM SINE Alu 20 166 -10 24 0 0 0 chr20 390655 390679 -71763203 + AT_rich Low_complexity Low_complexity 1 24 0 1564 153 18 7 chr20 390979 391260 -71762622 - AluJo SINE Alu -28 284 1 739 206 144 0 chr20 391303 391483 -71762399 + L1MB7 LINE L1 5955 6160 -24 206 271 7 46 chr20 391807 391958 -71761924 + C-rich Low_complexity Low_complexity 3 147 0 21 0 0 0 chr20 392004 392025 -71761857 + GC_rich Low_complexity Low_complexity 1 21 0 27 62 0 0 chr20 392123 392171 -71761711 + GC_rich Low_complexity Low_complexity 1 48 0 260 252 164 101 chr20 392279 392438 -71761444 + MIR SINE MIR 83 251 -11 339 239 65 0 chr20 392542 392634 -71761248 + MER91C DNA MER1_type 7 104 -36 184 309 104 70 chr20 392663 392893 -71760989 + L2 LINE L2 718 955 -2359 616 53 0 0 chr20 392895 392971 -71760911 - Alu SINE Alu -233 77 2 1455 151 88 18 chr20 393301 393573 -71760309 - AluJo SINE Alu -16 296 6 2051 121 0 0 chr20 393701 393998 -71759884 + AluSx SINE Alu 14 310 -2 364 248 83 0 chr20 394234 394343 -71759539 - L1MCc LINE L1 -4365 2757 2640 * 870 218 33 37 chr20 394340 394613 -71759269 - L1ME1 LINE L1 -165 6001 5764 1373 198 72 0 chr20 394707 394985 -71758897 + MER58B DNA MER1_type 21 318 -23 2159 66 17 10 chr20 395022 395310 -71758572 - AluSp SINE Alu -23 290 1 2157 115 0 0 chr20 395336 395641 -71758241 + AluSx SINE Alu 1 305 -7 562 163 24 41 chr20 395657 395780 -71758102 - FLAM_C SINE Alu -22 121 1 1486 243 156 28 chr20 395808 396222 -71757660 - L1MCc LINE L1 -4493 2448 2088 372 94 0 0 chr20 396222 396275 -71757607 + (TA)n Simple_repeat Simple_repeat 2 54 0 1486 243 156 28 chr20 396275 396619 -71757263 - L1MCc LINE L1 -4853 2088 1789 2362 60 13 0 chr20 396619 396918 -71756964 - AluY SINE Alu -8 303 1 1486 243 156 28 chr20 396918 397272 -71756610 - L1MCc LINE L1 -5152 1789 1188 1056 169 6 6 chr20 397277 397460 -71756422 + AluJo SINE Alu 1 183 -129 2206 177 100 15 chr20 397460 397929 -71755953 - LTR22 LTR ERVK 0 509 1 22635 84 21 2 chr20 397929 401045 -71752837 - HERVK22 LTR ERVK 0 6837 2332 1415 119 25 0 chr20 401043 401245 -71752637 - HERVK22 LTR ERVK -5932 905 699 * 5262 100 42 32 chr20 401233 402033 -71751849 - HERVK22 LTR ERVK -6029 808 1 2166 184 98 11 chr20 402033 402501 -71751381 - LTR22 LTR ERVK 0 509 1 862 121 0 0 chr20 402502 402626 -71751256 + AluJo SINE Alu 179 302 -10 830 246 99 55 chr20 402626 402988 -71750894 - L1MCc LINE L1 -5230 1193 816 370 266 46 87 chr20 403614 403653 -71750229 - L2 LINE L2 -562 2752 2713 1182 186 90 29 chr20 403653 403932 -71749950 - AluJo SINE Alu -4 298 3 370 266 46 87 chr20 403932 404133 -71749749 - L2 LINE L2 -601 2713 2522 725 232 78 53 chr20 404210 404529 -71749353 - HAL1 LINE L1 -168 2339 2013 2045 123 0 7 chr20 404775 405076 -71748806 + AluSx SINE Alu 1 299 -13 251 275 66 32 chr20 405219 405391 -71748491 + MLT1H LTR MaLR 50 201 -208 1933 138 3 3 chr20 405858 406156 -71747726 - AluSx SINE Alu -13 299 2 1782 172 7 0 chr20 406166 406469 -71747413 - AluJb SINE Alu -7 305 1 1885 128 7 0 chr20 406499 406787 -71747095 - AluJo SINE Alu -22 290 1 1100 183 26 30 chr20 406807 407037 -71746845 - AluJb SINE Alu -26 286 58 1324 55 31 0 chr20 407308 407471 -71746411 + AluSp SINE Alu 1 168 -145 253 0 54 0 chr20 407482 407519 -71746363 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 228 211 171 0 chr20 407693 407769 -71746113 + L2 LINE L2 3175 3263 -9 1735 156 30 20 chr20 408245 408546 -71745336 + AluJb SINE Alu 1 304 -8 344 217 96 70 chr20 408728 408843 -71745039 - MER91B DNA MER1_type -61 129 12 197 219 276 9 chr20 408855 408960 -71744922 - MIR SINE MIR -6 256 124 1060 192 103 5 chr20 409380 409594 -71744288 + MER46A DNA MER2_type 1 235 -1 306 67 0 0 chr20 409833 409878 -71744004 + (TG)n Simple_repeat Simple_repeat 2 46 0 27 29 0 0 chr20 410709 410743 -71743139 + AT_rich Low_complexity Low_complexity 1 34 0 270 116 0 0 chr20 413063 413106 -71740776 + (TTCC)n Simple_repeat Simple_repeat 1 43 0 308 246 76 94 chr20 413799 413970 -71739912 - MIR SINE MIR -56 206 39 797 144 106 0 chr20 413994 414126 -71739756 + MER3 DNA MER1_type 63 208 -1 279 0 0 0 chr20 414293 414324 -71739558 + (TG)n Simple_repeat Simple_repeat 2 32 0 2336 103 3 0 chr20 414383 414694 -71739188 + AluSx SINE Alu 1 312 0 252 0 0 0 chr20 414708 414736 -71739146 + (TA)n Simple_repeat Simple_repeat 2 29 0 2067 107 14 3 chr20 414792 415081 -71738801 - AluSx SINE Alu -20 292 1 583 258 125 33 chr20 415081 415321 -71738561 - L1MC4a LINE L1 -1915 5893 5632 234 249 186 27 chr20 416852 416975 -71736907 - MIR SINE MIR -77 131 45 1210 174 144 8 chr20 417639 417903 -71735979 - AluJo SINE Alu -12 300 1 317 337 53 80 chr20 418579 418843 -71735039 + L2 LINE L2 2981 3237 -35 36 0 0 0 chr20 419535 419571 -71734311 + AT_rich Low_complexity Low_complexity 1 36 0 2196 110 10 7 chr20 419616 419925 -71733957 - AluSg SINE Alu 0 310 1 258 125 0 0 chr20 419927 419975 -71733907 + (T)n Simple_repeat Simple_repeat 1 48 0 2066 117 20 7 chr20 420003 420302 -71733580 - AluSg1 SINE Alu -6 303 1 925 132 112 20 chr20 420303 420455 -71733427 - FRAM SINE Alu -14 162 1 319 297 108 51 chr20 420553 420748 -71733134 - L1ME LINE L1 -317 5804 5599 1880 155 3 17 chr20 420987 421284 -71732598 + AluJo SINE Alu 5 297 -15 1933 75 8 11 chr20 421284 421549 -71732333 + AluY SINE Alu 44 308 -3 223 319 77 47 chr20 421985 422154 -71731728 + L2 LINE L2 2648 2821 -493 360 310 47 31 chr20 422372 422501 -71731381 + L2 LINE L2 3182 3312 -1 949 248 89 23 chr20 422679 422982 -71730900 + L2 LINE L2 2348 2670 -644 46 45 0 0 chr20 422987 423054 -71730828 + AT_rich Low_complexity Low_complexity 1 67 0 3181 182 128 57 chr20 423092 423623 -71730259 - L1MD2 LINE L1 -32 6327 5716 2320 81 17 7 chr20 423623 423921 -71729961 - AluSg SINE Alu -9 301 1 3181 182 128 57 chr20 423921 424212 -71729670 - L1MD2 LINE L1 -643 5716 5447 825 300 149 16 chr20 424215 424754 -71729128 + L2 LINE L2 2697 3313 0 221 269 43 85 chr20 424937 425078 -71728804 - MIR SINE MIR -72 190 56 239 316 13 0 chr20 425184 425260 -71728622 - L2 LINE L2 -3 3269 3193 1261 193 52 0 chr20 425800 426013 -71727869 + MER58A DNA MER1_type 1 224 0 1445 163 58 34 chr20 426750 427045 -71726837 - AluJo SINE Alu -8 304 3 784 116 0 27 chr20 427060 427172 -71726710 - FLAM_C SINE Alu -18 125 17 1225 112 0 6 chr20 427934 428103 -71725779 - FRAM SINE Alu -8 168 1 24 0 0 0 chr20 429557 429581 -71724301 + AT_rich Low_complexity Low_complexity 1 24 0 237 306 65 28 chr20 429630 429738 -71724144 + L2 LINE L2 3156 3267 -5 527 295 84 0 chr20 429998 430164 -71723718 + MIR SINE MIR 16 195 -67 2286 52 4 0 chr20 430233 430502 -71723380 - AluY SINE Alu -8 303 34 2355 93 0 0 chr20 430668 430959 -71722923 - AluSg SINE Alu -17 293 3 1175 159 142 21 chr20 430996 431285 -71722597 - MER33 DNA MER1_type 0 324 1 250 338 102 13 chr20 431378 431535 -71722347 - MER5A DNA MER1_type -2 187 17 868 204 0 6 chr20 432748 432910 -71720972 - FRAM SINE Alu -18 158 1 2208 211 39 66 chr20 433061 433494 -71720388 + MER119 DNA MER1_type 34 450 -133 2505 71 0 3 chr20 433494 433805 -71720077 + AluSx SINE Alu 1 310 -2 2208 211 39 66 chr20 433805 433935 -71719947 + MER119 DNA MER1_type 450 582 -1 856 267 44 4 chr20 434063 434288 -71719594 + Charlie8 DNA MER1_type 45 278 -2139 327 275 55 9 chr20 434453 434562 -71719320 + MIR SINE MIR 32 145 -63 2476 61 0 10 chr20 434950 435260 -71718622 - AluY SINE Alu -4 307 1 22 0 0 0 chr20 435265 435287 -71718595 + AT_rich Low_complexity Low_complexity 1 22 0 2628 36 0 7 chr20 435468 435774 -71718108 - AluY SINE Alu -7 304 1 957 144 0 0 chr20 436708 436854 -71717028 + AluSg/x SINE Alu 129 274 -36 1021 130 204 133 chr20 437470 437793 -71716089 - MER7A DNA MER2_type -2 344 1 1835 174 0 3 chr20 439188 439475 -71714407 - AluJb SINE Alu -26 286 1 368 222 139 141 chr20 439475 439769 -71714113 + L1MC4 LINE L1 7478 7771 -271 2444 69 3 10 chr20 439769 440073 -71713809 - AluSp SINE Alu -11 302 1 368 222 139 141 chr20 440073 440299 -71713583 + L1MC4 LINE L1 7771 7999 -43 1734 165 9 37 chr20 440299 440620 -71713262 - AluJb SINE Alu 0 312 1 3719 154 29 50 chr20 440631 440672 -71713210 - L1MB3 LINE L1 0 6183 6143 1651 157 61 7 chr20 440672 440952 -71712930 + AluJb SINE Alu 1 295 -17 3719 154 29 50 chr20 440952 441302 -71712580 - L1MB3 LINE L1 -40 6143 5811 252 0 0 0 chr20 441302 441330 -71712552 + (CA)n Simple_repeat Simple_repeat 2 29 0 3719 154 29 50 chr20 441330 441659 -71712223 - L1MB3 LINE L1 -372 5811 5477 628 88 22 11 chr20 441664 441755 -71712127 - FLAM_C SINE Alu -19 124 33 1070 157 12 23 chr20 441776 442016 -71711866 - L1P3 LINE L1 -632 5522 5280 1632 173 48 0 chr20 443673 443974 -71709908 + AluJb SINE Alu 1 314 0 1790 151 0 31 chr20 444049 444340 -71709542 - AluJb SINE Alu -30 282 1 198 311 49 0 chr20 444504 444565 -71709317 - L2 LINE L2 -25 3288 3225 486 269 253 23 chr20 444580 445015 -71708867 - L2 LINE L2 -516 2798 2264 347 304 119 6 chr20 445008 445176 -71708706 - MIR SINE MIR -48 214 28 * 227 369 39 39 chr20 445255 445385 -71708497 + L2 LINE L2 3143 3272 0 262 208 0 0 chr20 446937 446985 -71706897 - L2 LINE L2 -6 3266 3219 224 91 0 0 chr20 447149 447182 -71706700 - L2 LINE L2 -2 3311 3279 840 186 0 0 chr20 447599 447728 -71706154 - FRAM SINE Alu -47 129 1 233 290 110 10 chr20 448030 448130 -71705752 + L1ME1 LINE L1 647 756 -5449 2418 75 0 28 chr20 448134 448453 -71705429 - AluY SINE Alu -1 310 1 2167 128 0 7 chr20 448532 448836 -71705046 - AluSx SINE Alu -10 302 1 521 284 118 34 chr20 448868 449031 -71704851 + L1ME1 LINE L1 1268 1416 -4980 773 214 0 0 chr20 449031 449162 -71704720 + FLAM_A SINE Alu 1 131 -2 521 284 118 34 chr20 449162 449347 -71704535 + L1ME1 LINE L1 1416 1645 -4751 328 330 69 35 chr20 449473 449734 -71704148 + L1ME1 LINE L1 1918 2187 -4209 255 220 11 55 chr20 449761 449852 -71704030 + L1ME1 LINE L1 2201 2287 -3930 * 2136 195 73 91 chr20 449843 450108 -71703774 + L1ME1 LINE L1 4725 4993 -1242 1843 157 0 0 chr20 450108 450382 -71703500 - AluSx SINE Alu -22 290 17 2136 195 73 91 chr20 450382 451353 -71702529 + L1ME1 LINE L1 4993 5923 -312 816 204 0 0 chr20 451354 451486 -71702396 - FLAM_C SINE Alu -10 133 2 374 86 200 0 chr20 451486 451556 -71702326 + L1ME1 LINE L1 5840 5923 -243 1231 130 31 16 chr20 451556 451748 -71702134 + MER1B DNA MER1_type 1 195 -102 2698 157 87 29 chr20 451866 452290 -71701592 + L1MD3 LINE L1 7401 7866 -129 1378 165 105 35 chr20 452290 452575 -71701307 - AluJo SINE Alu -7 305 1 2698 157 87 29 chr20 452575 452703 -71701179 + L1MD3 LINE L1 7866 7985 -10 2087 191 19 24 chr20 452746 453208 -71700674 + L1ME1 LINE L1 5494 5953 -213 1581 65 0 0 chr20 453208 453393 -71700489 + AluY SINE Alu 1 185 -126 704 58 0 0 chr20 453393 453480 -71700402 + AluY SINE Alu 218 304 -7 573 272 97 19 chr20 453480 453686 -71700196 + L1ME1 LINE L1 5945 6166 0 1929 130 20 13 chr20 453740 454039 -71699843 + AluSx SINE Alu 1 301 -11 1416 105 85 74 chr20 454071 454329 -71699553 + AluSx SINE Alu 44 304 -8 458 125 38 12 chr20 454356 454436 -71699446 + L1MA6 LINE L1 6215 6296 -4 1293 207 79 8 chr20 454441 454707 -71699175 + AluJo SINE Alu 2 286 -16 23 0 0 0 chr20 454717 454740 -71699142 + AT_rich Low_complexity Low_complexity 1 23 0 291 136 102 0 chr20 454763 454822 -71699060 + L1M4 LINE L1 2945 3009 -3137 911 144 23 0 chr20 454828 454960 -71698922 + AluJo SINE Alu 1 135 -177 2622 52 3 0 chr20 454969 455277 -71698605 + AluY SINE Alu 1 309 -2 1520 151 3 102 chr20 455289 455614 -71698268 + AluJo SINE Alu 1 293 -19 793 168 15 29 chr20 455790 455927 -71697955 + AluJo SINE Alu 2 136 -176 1527 131 75 75 chr20 455927 456209 -71697673 + AluJo SINE Alu 1 282 -30 1996 103 28 14 chr20 456272 456554 -71697328 + AluSg SINE Alu 1 286 -24 618 79 0 0 chr20 456554 456643 -71697239 + (GA)n Simple_repeat Simple_repeat 2 90 0 357 254 44 33 chr20 456708 456889 -71696993 + L1M4 LINE L1 3275 3457 -2689 766 149 0 0 chr20 457329 457436 -71696446 - AluSq/x SINE Alu -205 108 2 1213 164 66 145 chr20 458042 458360 -71695522 - AluJo SINE Alu -9 293 1 4263 154 23 16 chr20 458555 458633 -71695249 + MER44D DNA MER2_type 33 109 -2378 1399 175 65 14 chr20 458633 458924 -71694958 - AluJo SINE Alu -6 306 1 4263 154 23 16 chr20 458924 459540 -71694342 + MER44D DNA MER2_type 109 604 -1 2153 174 61 30 chr20 459583 460055 -71693827 - L1MB7 LINE L1 -19 6165 5679 1913 147 3 19 chr20 460058 460372 -71693510 - AluJo SINE Alu -3 309 1 1970 128 7 3 chr20 460401 460699 -71693183 + AluSq SINE Alu 1 299 -14 2005 78 7 55 chr20 461768 462075 -71691807 - AluSc SINE Alu -17 292 1 1072 130 0 0 chr20 463055 463209 -71690673 + AluSg/x SINE Alu 137 290 -22 197 296 99 12 chr20 463727 463808 -71690074 - MIR SINE MIR -114 148 61 1978 116 6 25 chr20 464345 464663 -71689219 + AluSx SINE Alu 1 312 0 819 151 0 0 chr20 464678 464797 -71689085 + FLAM_C SINE Alu 7 125 -18 2021 95 56 0 chr20 465072 465357 -71688525 + AluSx SINE Alu 1 301 -11 438 128 163 0 chr20 466027 466113 -71687769 - MIR SINE MIR -75 187 88 213 297 27 14 chr20 466109 466183 -71687699 - MIR SINE MIR -102 160 86 * 198 182 73 73 chr20 466428 466483 -71687399 + L2 LINE L2 3216 3270 -2 1827 106 67 14 chr20 467562 467845 -71686037 - AluSx SINE Alu -14 298 1 2336 188 155 11 chr20 468730 469277 -71684605 - MLT1E2 LTR MaLR 0 626 1 918 275 85 87 chr20 469277 469888 -71683994 - MLT1E2-int LTR MaLR 0 1371 762 1087 220 13 4 chr20 469904 470136 -71683746 - MLT1E2-int LTR MaLR -889 482 249 727 106 19 0 chr20 470142 470246 -71683636 - AluJb SINE Alu -19 293 188 370 172 253 0 chr20 470249 470348 -71683534 - MLT1E2-int LTR MaLR -1247 124 1 2959 183 37 41 chr20 470348 470977 -71682905 - MLT1E2 LTR MaLR 0 626 1 689 244 146 28 chr20 471766 471979 -71681903 - MIR SINE MIR -23 239 2 2281 58 7 0 chr20 472033 472328 -71681554 - AluSg SINE Alu -13 297 1 270 329 67 48 chr20 474013 474329 -71679553 + L2 LINE L2 2636 2957 -357 300 258 16 0 chr20 474944 475006 -71678876 + MIR3 SINE MIR 114 176 -32 525 308 263 23 chr20 475099 475539 -71678343 - L2 LINE L2 -3 3310 2752 487 316 35 0 chr20 475904 476075 -71677807 - MIR SINE MIR -40 222 46 180 0 0 0 chr20 476086 476106 -71677776 + (TC)n Simple_repeat Simple_repeat 2 21 0 1610 165 4 11 chr20 476106 476273 -71677609 - AluJo SINE Alu -27 285 119 204 40 0 0 chr20 476273 476298 -71677584 + (TTA)n Simple_repeat Simple_repeat 2 26 0 1610 165 4 11 chr20 476298 476397 -71677485 - AluJo SINE Alu -193 119 21 1346 277 62 57 chr20 476428 476974 -71676908 - MLT1E2 LTR MaLR 0 549 1 268 264 14 0 chr20 476991 477063 -71676819 + L1ME LINE L1 5759 5831 -290 869 183 29 11 chr20 477063 477238 -71676644 - MIR SINE MIR -22 240 63 2108 100 14 0 chr20 477382 477673 -71676209 - AluSq SINE Alu -18 295 1 2296 74 3 0 chr20 477735 478031 -71675851 + AluY SINE Alu 1 297 -14 1698 162 0 10 chr20 478176 478466 -71675416 - AluJb SINE Alu -5 307 21 200 213 0 0 chr20 478578 478625 -71675257 + T-rich Low_complexity Low_complexity 1 47 0 391 246 10 13 chr20 478853 478958 -71674924 + MIR SINE MIR 48 147 -61 2103 126 3 3 chr20 478962 479337 -71674545 + AluSx SINE Alu 1 375 0 410 245 27 54 chr20 479382 479529 -71674353 + MLT1H LTR MaLR 68 210 -339 22 0 0 0 chr20 479685 479707 -71674175 + AT_rich Low_complexity Low_complexity 1 22 0 296 288 32 48 chr20 479993 480118 -71673764 + MIR SINE MIR 140 262 0 711 300 146 6 chr20 480120 480463 -71673419 - L2 LINE L2 -62 3251 2861 3036 231 82 58 chr20 480571 481179 -71672703 - L2 LINE L2 -468 2846 2255 1645 178 48 66 chr20 481179 481572 -71672310 + MLT1B LTR MaLR 4 389 -1 3036 231 82 58 chr20 481572 481611 -71672271 - L2 LINE L2 -1059 2255 2218 2131 105 7 0 chr20 481611 481905 -71671977 + AluSq SINE Alu 1 296 -17 3036 231 82 58 chr20 481905 482262 -71671620 - L2 LINE L2 -1096 2218 1816 267 103 0 0 chr20 482277 482316 -71671566 + (GGAA)n Simple_repeat Simple_repeat 4 42 0 2301 93 0 0 chr20 482319 482620 -71671262 - AluSx SINE Alu -11 301 1 2673 208 122 41 chr20 482621 482650 -71671232 + L1MC4 LINE L1 7100 7125 -917 2193 105 0 3 chr20 482650 482954 -71670928 + AluSq SINE Alu 1 303 -10 2673 208 122 41 chr20 482954 483315 -71670567 + L1MC4 LINE L1 7125 7456 -586 2242 96 0 0 chr20 483315 483607 -71670275 + AluSg SINE Alu 1 292 -18 2673 208 122 41 chr20 483607 484020 -71669862 + L1MC4 LINE L1 7456 7982 -60 1731 172 3 0 chr20 484020 484310 -71669572 - AluJo SINE Alu -19 293 3 2673 208 122 41 chr20 484310 484375 -71669507 + L1MC4 LINE L1 7982 8040 -2 2468 234 114 22 chr20 484382 485152 -71668730 - L2 LINE L2 -1480 1834 994 445 292 17 17 chr20 485148 485268 -71668614 - MIR SINE MIR -129 133 14 * 182 88 0 29 chr20 485393 485427 -71668455 + (TAAAA)n Simple_repeat Simple_repeat 3 35 0 417 275 116 91 chr20 485540 486047 -71667835 - L2 LINE L2 -9 3304 2743 1323 151 50 107 chr20 486047 486169 -71667713 + AluJb SINE Alu 1 128 -184 2097 74 3 61 chr20 486169 486481 -71667401 + AluY SINE Alu 1 294 -17 1323 151 50 107 chr20 486481 486675 -71667207 + AluJb SINE Alu 128 299 -13 417 275 116 91 chr20 486675 486910 -71666972 - L2 LINE L2 -570 2743 2515 218 280 87 0 chr20 487161 487234 -71666648 + MIR SINE MIR 85 149 -59 1816 168 3 0 chr20 487271 487575 -71666307 + AluJb SINE Alu 1 305 -7 367 305 62 8 chr20 487612 487740 -71666142 - MIR3 SINE MIR -71 137 3 270 283 264 13 chr20 487826 487985 -71665897 + MIR SINE MIR 7 205 -57 924 245 138 47 chr20 488075 488178 -71665704 - MER20B DNA MER1_type -2 781 689 2255 79 0 3 chr20 488178 488470 -71665412 - AluSc SINE Alu -18 291 1 924 245 138 47 chr20 488470 488757 -71665125 - MER20B DNA MER1_type -94 689 342 2202 146 22 0 chr20 488757 489113 -71664769 + MLT1A1 LTR MaLR 2 365 0 924 245 138 47 chr20 489113 489170 -71664712 - MER20B DNA MER1_type -441 342 292 1874 134 22 116 chr20 489173 489355 -71664527 + L1MC2 LINE L1 5928 6125 -219 2031 77 0 71 chr20 489355 489691 -71664191 + AluSx SINE Alu 1 312 0 1874 134 22 116 chr20 489691 489902 -71663980 + L1MC2 LINE L1 6125 6277 -67 1494 183 33 36 chr20 489902 490203 -71663679 - AluJo SINE Alu -12 300 1 1874 134 22 116 chr20 490203 490256 -71663626 + L1MC2 LINE L1 6277 6333 -11 508 211 0 0 chr20 490282 490386 -71663496 - MER20B DNA MER1_type -494 289 186 287 325 25 42 chr20 490643 490768 -71663114 + MIR SINE MIR 41 163 -56 1269 256 153 9 chr20 490801 491246 -71662636 - L2 LINE L2 0 3313 2805 183 67 0 67 chr20 491531 491561 -71662321 - MER5A DNA MER1_type -35 154 127 320 155 17 17 chr20 491561 491619 -71662263 - AluJ/FLAM SINE Alu -244 58 1 255 238 95 29 chr20 491697 491802 -71662080 - MIR SINE MIR -67 141 30 319 288 85 72 chr20 491826 491979 -71661903 - MIR SINE MIR -29 233 79 226 321 205 9 chr20 491986 492098 -71661784 + MIR SINE MIR 16 149 -113 198 329 14 14 chr20 492446 492519 -71661363 + MIR SINE MIR 111 183 -79 550 269 45 6 chr20 492849 493005 -71660877 - MIR SINE MIR -38 224 63 925 214 78 79 chr20 493612 494145 -71659737 - L2 LINE L2 -1 3312 2771 2034 105 3 7 chr20 494145 494459 -71659423 - AluSx SINE Alu 0 312 5 925 214 78 79 chr20 494459 494609 -71659273 - L2 LINE L2 -542 2771 2622 228 274 57 47 chr20 494669 494775 -71659107 - MIR SINE MIR -10 252 146 783 184 13 13 chr20 494806 494964 -71658918 - L1MB5 LINE L1 0 6174 6017 418 267 0 9 chr20 494964 495069 -71658813 - MIR SINE MIR -98 164 61 2013 128 10 3 chr20 495159 495463 -71658419 - AluSq SINE Alu -7 306 1 2095 108 6 10 chr20 495490 495804 -71658078 + AluSp SINE Alu 1 313 0 248 220 121 26 chr20 495937 496111 -71657771 + MIR SINE MIR 9 248 -14 2130 105 0 0 chr20 496279 496594 -71657288 - AluSx SINE Alu 0 312 1 260 287 20 53 chr20 496870 497001 -71656881 + MIR SINE MIR 39 166 -62 454 138 0 0 chr20 497722 497787 -71656095 - AluSq/x SINE Alu -194 119 55 373 217 54 0 chr20 498245 498337 -71655545 + MIR SINE MIR 80 176 -86 2206 119 0 0 chr20 499048 499359 -71654523 - AluSx SINE Alu -1 311 1 2194 96 10 0 chr20 499814 500115 -71653767 - AluSg SINE Alu -6 304 1 1961 127 0 7 chr20 500217 500536 -71653346 + AluSx SINE Alu 1 317 0 1520 200 95 77 chr20 500559 500652 -71653230 - Charlie4a DNA MER1_type -1456 505 415 744 172 0 22 chr20 500652 500786 -71653096 - FLAM_C SINE Alu 0 133 3 1520 200 95 77 chr20 500786 501188 -71652694 - Charlie4a DNA MER1_type -1546 415 1 263 307 137 13 chr20 501247 501400 -71652482 - MIR3 SINE MIR -36 172 1 184 286 0 29 chr20 501925 501995 -71651887 + MIR SINE MIR 80 147 -115 181 311 40 0 chr20 502230 502304 -71651578 - L2 LINE L2 -131 3182 3106 184 242 326 5 chr20 502364 502554 -71651328 - L2 LINE L2 -351 2963 2713 261 296 74 9 chr20 502599 502707 -71651175 + MIR SINE MIR 31 145 -63 574 233 123 110 chr20 503435 503882 -71650000 + L2 LINE L2 2819 3271 -1 401 218 89 10 chr20 503889 503990 -71649892 - MIR SINE MIR -77 185 77 290 197 30 0 chr20 504474 504540 -71649342 + L3 LINE CR1 1405 1472 -105 232 174 22 0 chr20 504657 504703 -71649179 - Charlie8 DNA MER1_type -1003 1414 1368 783 245 180 11 chr20 505035 505313 -71648569 + LTR16C LTR ERVL 167 491 0 367 221 74 32 chr20 505931 506026 -71647856 - L2 LINE L2 -6 3266 3168 243 309 64 21 chr20 506098 506192 -71647690 - L2 LINE L2 -248 3065 2968 1724 170 3 19 chr20 506228 506545 -71647337 - AluJb SINE Alu 0 312 1 1244 238 31 48 chr20 506813 507221 -71646661 + MLT1J LTR MaLR 1 437 -74 2078 111 3 10 chr20 507280 507586 -71646296 + AluSx SINE Alu 9 312 0 474 340 0 13 chr20 507994 508153 -71645729 + MIR3 SINE MIR 45 201 -7 315 71 0 0 chr20 508244 508286 -71645596 + (CA)n Simple_repeat Simple_repeat 1 42 0 7301 31 0 0 chr20 508411 509713 -71644169 - L1PA5 LINE L1 -3 6151 4848 580 311 36 0 chr20 509716 509912 -71643970 + MIR SINE MIR 57 259 -3 344 335 55 0 chr20 510140 510304 -71643578 + MIR SINE MIR 90 262 0 954 80 7 0 chr20 510346 510484 -71643398 + L1MA2 LINE L1 6166 6304 0 242 274 59 13 chr20 510614 510767 -71643115 + (TTCA)n Simple_repeat Simple_repeat 4 163 0 * 439 220 27 65 chr20 510735 510921 -71642961 + (TCCA)n Simple_repeat Simple_repeat 1 179 0 312 293 35 23 chr20 510868 511042 -71642840 + (TTCA)n Simple_repeat Simple_repeat 4 179 0 * 262 344 53 64 chr20 511304 511586 -71642296 - L2 LINE L2 0 3272 2994 2226 87 0 78 chr20 511594 511927 -71641955 - AluSx SINE Alu -5 307 1 234 279 58 19 chr20 511944 512048 -71641834 - MIR SINE MIR -67 141 34 1576 152 93 24 chr20 512305 512595 -71641287 + AluJo SINE Alu 1 310 -2 2058 146 7 0 chr20 512657 512952 -71640930 + AluSx SINE Alu 6 302 -10 483 291 0 33 chr20 512978 513129 -71640753 - MIR SINE MIR -14 248 103 2208 98 3 29 chr20 513487 513794 -71640088 - AluSx SINE Alu -11 301 3 1004 182 0 0 chr20 513855 514020 -71639862 + FRAM SINE Alu 1 165 -11 856 266 47 7 chr20 514026 514363 -71639519 - MLT1J LTR MaLR -135 376 6 224 284 68 34 chr20 514427 514515 -71639367 + L2 LINE L2 3133 3223 -49 267 219 24 37 chr20 514940 515022 -71638860 + CT-rich Low_complexity Low_complexity 4 84 0 248 270 11 0 chr20 515036 515125 -71638757 + L1MC4 LINE L1 6614 6703 -1339 313 203 17 0 chr20 515271 515330 -71638552 + L1MC4 LINE L1 6644 6703 -1339 210 143 0 0 chr20 515330 515365 -71638517 + (TG)n Simple_repeat Simple_repeat 1 35 0 464 317 10 63 chr20 515365 515570 -71638312 - L2 LINE L2 -18 3295 3102 2361 102 3 0 chr20 515639 515943 -71637939 - AluSg SINE Alu -5 305 1 1153 218 17 59 chr20 515947 516181 -71637701 - LTR37A LTR ERV1 -8 418 207 1798 140 13 39 chr20 516181 516488 -71637394 - AluJb SINE Alu -13 299 1 1153 218 17 59 chr20 516488 516657 -71637225 - LTR37A LTR ERV1 -219 207 32 243 312 26 0 chr20 516727 516804 -71637078 - L2 LINE L2 -31 3241 3163 5411 137 30 16 chr20 516884 517882 -71636000 - Tigger3b DNA MER2_type 0 1231 220 1518 94 5 0 chr20 517882 518074 -71635808 - AluSp SINE Alu -12 301 109 1664 169 55 48 chr20 518081 518501 -71635381 - MER113 DNA MER1_type? -74 447 25 266 214 14 0 chr20 518541 518611 -71635271 - MIR3 SINE MIR -54 154 84 1356 276 45 17 chr20 519013 519433 -71634449 + MLT1K LTR MaLR 61 492 -96 1268 204 6 100 chr20 519468 519481 -71634401 - AluSp SINE Alu -6 307 294 216 0 0 0 chr20 519481 519505 -71634377 + (TTAAA)n Simple_repeat Simple_repeat 4 27 0 1268 204 6 100 chr20 519505 519830 -71634052 - AluSp SINE Alu -19 294 1 284 98 98 0 chr20 519832 519883 -71633999 - FLAM_A SINE Alu -4 129 74 258 32 0 0 chr20 519900 519931 -71633951 + (CA)n Simple_repeat Simple_repeat 2 32 0 302 145 0 16 chr20 519933 519995 -71633887 + MLT1K LTR MaLR 525 585 -3 546 274 30 38 chr20 520358 520595 -71633287 - L2 LINE L2 -1 3312 3078 443 121 50 177 chr20 520604 520745 -71633137 + L1MB4 LINE L1 6058 6180 0 724 256 75 10 chr20 520752 521108 -71632774 - L2 LINE L2 -228 3085 2704 2134 129 7 0 chr20 521243 521537 -71632345 - AluSx SINE Alu -14 298 3 211 264 0 94 chr20 522010 522116 -71631766 + L2 LINE L2 3218 3313 0 549 330 24 5 chr20 522181 522387 -71631495 - MIR SINE MIR 0 262 53 1721 158 7 52 chr20 522543 522853 -71631029 - AluJo SINE Alu -16 296 1 2397 103 0 0 chr20 522865 523166 -71630716 - AluSx SINE Alu -11 301 1 446 281 39 59 chr20 523310 523513 -71630369 + L1MC4a LINE L1 5691 5889 -1919 1664 156 11 35 chr20 523515 523798 -71630084 - AluJb SINE Alu -36 276 1 321 281 39 55 chr20 523799 523927 -71629955 + L1MC4a LINE L1 5856 5981 -1827 426 221 0 10 chr20 523965 524069 -71629813 + MIR SINE MIR 158 260 -2 1349 57 0 0 chr20 524081 524239 -71629643 + AluY SINE Alu 146 303 -8 2317 108 0 6 chr20 524344 524658 -71629224 - AluSx SINE Alu 0 312 1 2059 152 10 0 chr20 524690 524999 -71628883 + AluJb SINE Alu 1 312 0 180 0 0 0 chr20 525242 525262 -71628620 + (TTA)n Simple_repeat Simple_repeat 2 21 0 2286 116 7 0 chr20 525855 526165 -71627717 + AluSx SINE Alu 1 312 0 249 294 151 0 chr20 526239 526365 -71627517 + MIR SINE MIR 48 192 -70 292 275 90 3 chr20 526464 526653 -71627229 + MIR SINE MIR 2 262 0 308 270 73 36 chr20 526928 527065 -71626817 + L2 LINE L2 3162 3303 -10 488 246 183 6 chr20 527176 527351 -71626531 + MIR SINE MIR 32 237 -25 621 213 54 81 chr20 527400 527579 -71626303 + MIR SINE MIR 12 183 -79 2083 137 0 0 chr20 527579 527872 -71626010 - AluSx SINE Alu -18 294 2 621 213 54 81 chr20 527872 527950 -71625932 + MIR SINE MIR 183 262 0 239 277 50 10 chr20 528048 528149 -71625733 - MIR SINE MIR -76 132 28 902 232 31 105 chr20 528558 528768 -71625114 - L1MC4 LINE L1 0 8042 7881 1914 68 124 11 chr20 528768 529034 -71624848 - AluSg1 SINE Alu -13 296 1 902 232 31 105 chr20 529034 529272 -71624610 - L1MC4 LINE L1 -161 7881 7627 1915 142 28 3 chr20 529464 529753 -71624129 + AluJb SINE Alu 1 296 -16 198 308 33 0 chr20 529876 529967 -71623915 + MIR SINE MIR 34 127 -81 222 289 70 26 chr20 530027 530141 -71623741 + MIR SINE MIR 26 144 -64 364 318 128 5 chr20 530479 530690 -71623192 + L1MC4a LINE L1 5740 5976 -1832 686 200 13 26 chr20 530843 530998 -71622884 + L1ME3A LINE L1 6016 6168 -2 2436 88 3 0 chr20 531001 531297 -71622585 + AluSx SINE Alu 1 297 -15 1849 152 13 23 chr20 531365 531668 -71622214 + AluJo SINE Alu 1 300 -12 196 322 34 8 chr20 532013 532131 -71621751 - MIR3 SINE MIR -86 122 2 195 214 36 18 chr20 532439 532495 -71621387 + MIR SINE MIR 97 153 -55 182 363 99 0 chr20 532473 532564 -71621318 + L2 LINE L2 3163 3262 -10 * 553 91 0 0 chr20 532688 532765 -71621117 + FLAM_A SINE Alu 58 134 -8 313 283 78 6 chr20 533255 533421 -71620461 + L1MC4a LINE L1 5748 5925 -1883 192 135 0 0 chr20 533900 533937 -71619945 + (CA)n Simple_repeat Simple_repeat 1 37 0 335 317 43 6 chr20 534312 534476 -71619406 + L1MC4a LINE L1 5724 5893 -1915 1306 98 0 0 chr20 534602 534766 -71619116 - AluSc SINE Alu -24 285 122 220 265 84 12 chr20 535437 535520 -71618362 - MIR SINE MIR -100 108 20 274 222 0 42 chr20 536001 536073 -71617809 + MIR SINE MIR 104 172 -90 2417 83 0 7 chr20 536132 536434 -71617448 + AluSx SINE Alu 1 300 -12 574 279 131 18 chr20 536494 536723 -71617159 + MIR SINE MIR 8 262 0 290 297 187 7 chr20 537367 537522 -71616360 + MIR SINE MIR 37 219 -43 284 264 138 18 chr20 538839 539006 -71614876 + MIR SINE MIR 73 259 -3 22 70 0 0 chr20 539350 539393 -71614489 + GC_rich Low_complexity Low_complexity 1 43 0 232 205 51 17 chr20 539606 539723 -71614159 + (CCG)n Simple_repeat Simple_repeat 1 121 0 28 71 0 0 chr20 539876 539932 -71613950 + GC_rich Low_complexity Low_complexity 1 56 0 23 54 0 0 chr20 539960 539997 -71613885 + GC_rich Low_complexity Low_complexity 1 37 0 209 170 0 21 chr20 540231 540278 -71613604 + MIR SINE MIR 94 139 -69 352 265 106 41 chr20 540332 540502 -71613380 - MER5A DNA MER1_type -2 187 7 519 266 40 0 chr20 540619 540743 -71613139 - L2 LINE L2 -1 3312 3184 350 242 121 0 chr20 541929 542053 -71611829 + MIR SINE MIR 108 246 -16 419 258 177 43 chr20 542198 542497 -71611385 + L2 LINE L2 2834 3172 -141 * 453 200 0 0 chr20 542486 542566 -71611316 - L2 LINE L2 0 3313 3234 640 256 92 29 chr20 542620 542827 -71611055 - MIR SINE MIR -29 233 14 343 268 10 0 chr20 543625 543737 -71610145 - L1M3 LINE L1 -601 5579 5468 1921 79 12 0 chr20 543806 544047 -71609835 + AluSx SINE Alu 34 277 -35 225 0 0 0 chr20 544048 544073 -71609809 + (TC)n Simple_repeat Simple_repeat 2 26 0 * 777 98 0 0 chr20 544072 544184 -71609698 + (TA)n Simple_repeat Simple_repeat 1 112 0 193 267 0 0 chr20 544352 544397 -71609485 - MIR SINE MIR 0 262 218 1513 199 59 3 chr20 544498 544820 -71609062 + MLT1F LTR MaLR 1 340 -202 241 157 12 108 chr20 544882 544900 -71608982 + MLT1G LTR MaLR 468 486 -104 1927 152 0 23 chr20 544900 545203 -71608679 + AluJo SINE Alu 1 296 -16 241 157 12 108 chr20 545203 545267 -71608615 + MLT1G LTR MaLR 486 590 0 893 259 95 39 chr20 545273 545609 -71608273 - MLT1J LTR MaLR -143 368 14 1053 215 18 0 chr20 545659 545882 -71608000 + MIR SINE MIR 15 241 -21 2024 124 28 0 chr20 545920 546211 -71607671 - AluSq SINE Alu -14 299 1 214 293 17 0 chr20 546327 546385 -71607497 + L2 LINE L2 3255 3313 0 410 257 20 72 chr20 546620 546745 -71607137 - MER103 DNA DNA -10 156 39 1704 192 10 45 chr20 546745 547058 -71606824 - AluJb SINE Alu -10 302 1 410 257 20 72 chr20 547058 547084 -71606798 - MER103 DNA DNA -127 39 13 778 202 96 6 chr20 547420 547598 -71606284 - MIR SINE MIR -3 259 66 1212 234 135 11 chr20 547985 548353 -71605529 + MLT1G LTR MaLR 168 577 -13 3069 191 16 35 chr20 548431 548956 -71604926 + MER82 DNA MER2_type 1 513 -140 2357 93 0 0 chr20 548956 549246 -71604636 - AluSc SINE Alu -19 290 1 3069 191 16 35 chr20 549246 549385 -71604497 + MER82 DNA MER2_type 513 653 0 533 238 41 17 chr20 549570 549760 -71604122 - MIR SINE MIR -44 218 25 193 171 0 0 chr20 549817 549852 -71604030 + L2 LINE L2 3216 3250 -22 1927 161 3 3 chr20 600206 600505 -71553377 - AluJb SINE Alu -13 299 1 286 284 176 6 chr20 600539 600715 -71553167 - L1MC4 LINE L1 -8 8034 7829 280 274 77 30 chr20 600908 601076 -71552806 + MER113 DNA MER1_type? 283 458 -63 471 231 30 22 chr20 601728 601862 -71552020 - MLT1J LTR MaLR -363 148 14 1113 215 18 0 chr20 601912 602135 -71551747 + MIR SINE MIR 15 241 -21 2008 124 28 0 chr20 602173 602463 -71551419 - AluSq SINE Alu -15 298 1 216 318 16 0 chr20 602574 602637 -71551245 + L2 LINE L2 3250 3313 0 375 263 20 72 chr20 602872 602997 -71550885 - MER103 DNA DNA -10 156 39 1711 192 10 45 chr20 602997 603310 -71550572 - AluJb SINE Alu -10 302 1 375 263 20 72 chr20 603310 603336 -71550546 - MER103 DNA DNA -127 39 13 804 219 115 0 chr20 603672 603855 -71550027 - MIR SINE MIR -3 259 56 1157 234 135 11 chr20 604237 604605 -71549277 + MLT1G LTR MaLR 168 577 -13 3268 191 16 35 chr20 604683 605208 -71548674 + MER82 DNA MER2_type 1 513 -140 2344 93 0 0 chr20 605208 605498 -71548384 - AluSc SINE Alu -19 290 1 3268 191 16 35 chr20 605498 605637 -71548245 + MER82 DNA MER2_type 513 653 0 566 238 41 17 chr20 605822 606012 -71547870 - MIR SINE MIR -44 218 25 202 225 0 0 chr20 606064 606104 -71547778 + L2 LINE L2 3211 3250 -22 271 120 245 18 chr20 606748 606830 -71547052 + MIR3 SINE MIR 70 164 -44 365 320 54 0 chr20 606923 607070 -71546812 - MIR SINE MIR -106 156 2 348 330 172 21 chr20 607091 607324 -71546558 + L2 LINE L2 2948 3215 -57 1918 156 0 3 chr20 607415 607698 -71546184 + AluJb SINE Alu 11 292 -20 1363 213 295 2 chr20 607698 608111 -71545771 + MLT1G LTR MaLR 57 590 0 1071 223 116 57 chr20 608112 608801 -71545081 + L2 LINE L2 2570 3313 0 318 276 142 8 chr20 609405 609532 -71544350 + MIR SINE MIR 119 262 0 1873 168 6 22 chr20 609788 610103 -71543779 + AluJo SINE Alu 1 310 -2 625 285 7 0 chr20 610163 610314 -71543568 + MIR SINE MIR 45 196 -66 251 217 84 24 chr20 610322 610405 -71543477 - MIR SINE MIR -85 177 90 276 229 34 30 chr20 610758 610863 -71543019 + L1MC4a LINE L1 5514 5612 -598 * 432 256 30 67 chr20 610825 610989 -71542893 - L2 LINE L2 -9 3304 3147 1218 237 104 64 chr20 611162 611693 -71542189 + MLT1H1 LTR MaLR 4 555 0 241 240 0 0 chr20 611696 611746 -71542136 + L1MC4a LINE L1 5611 5660 -510 464 337 30 0 chr20 612129 612331 -71541551 + L1MC4a LINE L1 5714 5921 -1887 2213 112 0 0 chr20 612826 613122 -71540760 - AluSg SINE Alu -14 296 1 1285 244 71 92 chr20 613152 613726 -71540156 + MLT1F1 LTR MaLR 6 567 0 762 95 0 63 chr20 613859 613985 -71539897 - AluSp/q SINE Alu -4 309 192 358 318 36 41 chr20 614042 614237 -71539645 - L1ME3A LINE L1 -284 5886 5693 367 294 76 46 chr20 614378 614575 -71539307 + L2 LINE L2 3108 3310 -3 201 276 86 0 chr20 614587 614645 -71539237 + MIR3 SINE MIR 104 166 -42 662 259 71 13 chr20 614780 615004 -71538878 - MIR SINE MIR 0 262 26 1634 148 7 14 chr20 615222 615500 -71538382 - AluJo SINE Alu -36 276 1 847 257 21 22 chr20 615503 615752 -71538130 - MIR SINE MIR -13 249 3 222 171 49 0 chr20 615911 615952 -71537930 + polypurine Low_complexity Low_complexity 5 47 0 543 335 144 17 chr20 615993 616161 -71537721 + L2 LINE L2 2791 2936 -336 2218 110 0 7 chr20 616161 616471 -71537411 + AluSx SINE Alu 2 309 -3 543 335 144 17 chr20 616471 616713 -71537169 + L2 LINE L2 2936 3251 -21 187 274 20 0 chr20 616744 616795 -71537087 + L2 LINE L2 3221 3272 0 530 303 7 7 chr20 616979 617134 -71536748 + MIR SINE MIR 77 231 -31 2723 185 27 119 chr20 617182 617644 -71536238 - L1MC4 LINE L1 0 8042 7539 1918 123 32 0 chr20 617644 617928 -71535954 - AluSx SINE Alu -18 294 2 2723 185 27 119 chr20 617928 617985 -71535897 - L1MC4 LINE L1 -503 7539 7478 183 42 0 0 chr20 617985 618009 -71535873 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2157 89 3 3 chr20 618013 618295 -71535587 - AluSq SINE Alu -31 282 1 2723 185 27 119 chr20 618295 618717 -71535165 - L1MC4 LINE L1 -567 7475 7182 317 328 61 22 chr20 618775 619004 -71534878 - L1MC4a LINE L1 -1741 6067 5830 256 247 0 27 chr20 619058 619131 -71534751 - MIR3 SINE MIR -51 157 87 211 217 132 38 chr20 619655 619761 -71534121 + MIR SINE MIR 16 131 -77 581 205 214 3 chr20 620984 621156 -71532726 - MIR SINE MIR -32 230 25 434 245 31 44 chr20 621493 621652 -71532230 + MIR3 SINE MIR 20 176 -32 230 263 0 18 chr20 621642 621699 -71532183 + L2 LINE L2 3008 3063 -209 * 218 264 0 0 chr20 621769 621822 -71532060 - L2 LINE L2 -4 3268 3216 192 220 40 0 chr20 621858 621908 -71531974 + L2 LINE L2 3262 3313 0 859 219 36 101 chr20 621944 622332 -71531550 - MER113 DNA MER1_type? 0 521 159 855 198 6 6 chr20 622393 622565 -71531317 + L1ME1 LINE L1 5986 6157 -9 1689 146 47 7 chr20 622590 622864 -71531018 + AluSx SINE Alu 1 285 -27 405 54 0 0 chr20 622864 622920 -71530962 + (CCA)n Simple_repeat Simple_repeat 3 58 0 313 179 0 0 chr20 622929 622985 -71530897 - MER113 DNA MER1_type? -432 89 34 252 310 0 0 chr20 623013 623084 -71530798 + (TGAA)n Simple_repeat Simple_repeat 3 73 0 393 306 135 39 chr20 623093 623322 -71530560 - L3 LINE CR1 -74 1503 1253 523 297 160 20 chr20 623383 623689 -71530193 - L2 LINE L2 -92 3221 2873 1555 168 3 46 chr20 623891 624040 -71529842 + AluJo SINE Alu 1 132 -180 2203 100 7 7 chr20 624040 624340 -71529542 + AluSg SINE Alu 1 300 -10 1555 168 3 46 chr20 624340 624493 -71529389 + AluJo SINE Alu 132 290 -22 745 292 50 0 chr20 624523 624742 -71529140 + MIR SINE MIR 12 241 -21 2002 116 14 0 chr20 624956 625249 -71528633 - AluSx SINE Alu -15 297 1 2208 106 0 0 chr20 625435 625737 -71528145 - AluSg SINE Alu -8 302 1 870 235 53 62 chr20 625907 626453 -71527429 + L2 LINE L2 2710 3267 -46 334 154 31 0 chr20 626834 626899 -71526983 - MIR SINE MIR -92 170 104 598 188 56 42 chr20 626920 627064 -71526818 + MIR SINE MIR 117 262 0 292 241 24 12 chr20 627072 627155 -71526727 - MIR SINE MIR -149 113 30 1527 177 33 20 chr20 627167 627467 -71526415 + AluJo SINE Alu 5 308 -4 203 170 21 0 chr20 627480 627527 -71526355 + (CAA)n Simple_repeat Simple_repeat 3 50 0 247 293 15 21 chr20 627937 628272 -71525610 + (GGGTG)n Simple_repeat Simple_repeat 1 332 0 192 361 0 50 chr20 628611 628730 -71525152 + MIR SINE MIR 76 188 -74 180 125 0 0 chr20 629165 629197 -71524685 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 309 318 19 34 chr20 629389 629569 -71524313 + L1ME LINE L1 5483 5646 -524 749 251 138 10 chr20 629715 629830 -71524052 - L2 LINE L2 0 3313 3214 1768 157 7 20 chr20 629830 630135 -71523747 + AluJo SINE Alu 1 301 -11 749 251 138 10 chr20 630135 630310 -71523572 - L2 LINE L2 -99 3214 2986 31 44 0 0 chr20 630534 630579 -71523303 + AT_rich Low_complexity Low_complexity 1 45 0 1516 170 20 30 chr20 630596 630896 -71522986 + AluJo SINE Alu 1 297 -15 877 150 0 0 chr20 630939 631072 -71522810 + AluSq/x SINE Alu 1 133 -179 188 229 66 33 chr20 631238 631299 -71522583 - L2 LINE L2 -202 3070 3008 198 296 83 22 chr20 631795 631913 -71521969 - MIR SINE MIR -65 143 60 708 185 7 46 chr20 631989 632102 -71521780 + MER5A DNA MER1_type 2 109 -80 1617 147 65 4 chr20 632102 632381 -71521501 + AluJb SINE Alu 1 296 -16 708 185 7 46 chr20 632381 632418 -71521464 + MER5A DNA MER1_type 109 146 -43 1476 136 36 0 chr20 632480 632731 -71521151 - L1MD3 LINE L1 -3 7992 7733 1831 234 29 39 chr20 633216 633699 -71520183 + MLT1H LTR MaLR 72 549 0 528 305 105 42 chr20 633701 634226 -71519656 + MLT1J LTR MaLR 36 500 -11 446 139 222 9 chr20 634924 635032 -71518850 - MER63 DNA MER1_type -77 759 3 260 283 121 46 chr20 635038 635211 -71518671 - L2 LINE L2 -34 3279 3094 2245 108 0 0 chr20 635271 635576 -71518306 + AluSx SINE Alu 1 305 -7 889 226 51 23 chr20 635595 635812 -71518070 + MIR SINE MIR 36 258 -4 705 328 128 18 chr20 635817 636362 -71517520 - L2 LINE L2 -337 2977 2373 326 331 143 11 chr20 636458 636633 -71517249 + MIR SINE MIR 2 199 -63 2176 192 90 13 chr20 636709 637177 -71516705 + MLT1D LTR MaLR 2 505 0 2105 83 0 0 chr20 637275 637552 -71516330 + AluSx SINE Alu 23 299 -13 396 279 168 37 chr20 637768 638066 -71515816 - L2 LINE L2 -41 3272 2936 432 312 81 6 chr20 638380 638553 -71515329 + MIR SINE MIR 7 192 -70 433 214 70 14 chr20 638612 638748 -71515134 - MIR3 SINE MIR -36 172 34 34 65 0 0 chr20 638944 639006 -71514876 + GC_rich Low_complexity Low_complexity 1 62 0 25 0 0 0 chr20 639101 639126 -71514756 + GC_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr20 639386 639409 -71514473 + GC_rich Low_complexity Low_complexity 1 23 0 945 253 17 11 chr20 639540 639767 -71514115 - MIR SINE MIR -32 230 3 805 252 75 52 chr20 640621 640745 -71513137 - MLT1L LTR MaLR -40 575 455 2020 127 7 0 chr20 640745 641037 -71512845 + AluSx SINE Alu 1 294 -18 805 252 75 52 chr20 641037 641218 -71512664 - MLT1L LTR MaLR -160 455 263 486 298 0 0 chr20 641234 641385 -71512497 + L2 LINE L2 2830 2980 -333 467 233 47 23 chr20 641390 641519 -71512363 - MIR SINE MIR -4 258 127 375 174 92 18 chr20 641721 641830 -71512052 + LTR16C LTR ERVL 375 491 0 686 244 80 10 chr20 641874 642075 -71511807 + MIR SINE MIR 45 259 -3 338 185 43 33 chr20 642143 642235 -71511647 - MLT1K LTR MaLR 0 588 496 1340 274 40 44 chr20 642340 642841 -71511041 - MLT1J LTR MaLR -12 499 1 359 275 63 58 chr20 643008 643197 -71510685 - L2 LINE L2 -5 3308 3119 647 173 18 0 chr20 643218 643328 -71510554 - MLT1A1 LTR MaLR 0 365 254 673 122 15 76 chr20 643330 643461 -71510421 + MLT1A1 LTR MaLR 17 139 -226 423 107 0 0 chr20 643461 643517 -71510365 - Alu SINE Alu -16 296 241 2046 196 25 27 chr20 643517 643957 -71509925 + MLT1-int LTR MaLR 180 618 -1117 233 250 16 0 chr20 644001 644065 -71509817 + MLT1-int LTR MaLR 821 885 -486 392 148 0 0 chr20 644111 644172 -71509710 + MLT-int LTR MaLR 681 741 -994 2284 145 25 27 chr20 644385 644793 -71509089 + MLT1A2-int LTR MaLR 1317 1723 -12 605 110 33 0 chr20 644812 644903 -71508979 + MLT1A2 LTR MaLR 1 94 -280 401 214 36 0 chr20 645005 645089 -71508793 - MLT1L LTR MaLR -337 278 192 1812 112 0 12 chr20 645940 646028 -71507854 + AluSx SINE Alu 48 136 -176 2080 109 16 0 chr20 646028 646331 -71507551 + AluSc SINE Alu 1 308 -1 1812 112 0 12 chr20 646331 646501 -71507381 + AluSx SINE Alu 136 303 -9 252 304 205 9 chr20 646874 646986 -71506896 - L3 LINE CR1 -117 1460 1327 261 128 0 0 chr20 648465 648512 -71505370 + (TAAA)n Simple_repeat Simple_repeat 1 47 0 266 168 50 40 chr20 649990 650091 -71503791 + C-rich Low_complexity Low_complexity 5 106 0 308 286 150 29 chr20 650566 650741 -71503141 - MIR SINE MIR -66 196 3 337 233 0 92 chr20 650753 650873 -71503009 + MIR SINE MIR 105 213 -49 * 465 261 72 0 chr20 650848 650986 -71502896 - MIR SINE MIR -4 258 111 262 229 16 0 chr20 651103 651164 -71502718 + L2 LINE L2 3252 3313 0 226 288 72 27 chr20 651887 651998 -71501884 + L2 LINE L2 3155 3270 -2 502 236 241 11 chr20 652286 652460 -71501422 - MIR SINE MIR 0 262 49 298 259 170 0 chr20 652471 652583 -71501299 + L2 LINE L2 3140 3270 -2 443 254 44 0 chr20 652838 652952 -71500930 + MIR SINE MIR 3 121 -141 631 284 91 0 chr20 652995 653192 -71500690 - MIR SINE MIR 0 262 48 260 255 122 10 chr20 653679 653777 -71500105 + MIR3 SINE MIR 74 182 -26 416 214 255 0 chr20 653874 654019 -71499863 + MIR SINE MIR 81 262 0 292 116 0 0 chr20 654104 654147 -71499735 + MIR SINE MIR 81 123 -85 285 266 45 103 chr20 654303 654487 -71499395 + MIR SINE MIR 18 182 -49 189 222 48 32 chr20 654793 654856 -71499026 - MIR SINE MIR -86 122 59 285 380 83 8 chr20 655077 655315 -71498567 - MIR SINE MIR 0 262 1 240 200 46 15 chr20 656420 656485 -71497397 + MIR SINE MIR 84 150 -112 316 316 98 0 chr20 656789 656922 -71496960 - MIR3 SINE MIR -14 194 49 408 88 0 0 chr20 658240 658297 -71495585 + (TG)n Simple_repeat Simple_repeat 1 57 0 332 89 0 63 chr20 658568 658647 -71495235 + (TCCC)n Simple_repeat Simple_repeat 2 75 0 465 262 93 27 chr20 659179 659362 -71494520 - MIR3 SINE MIR -3 205 11 294 182 0 0 chr20 660185 660251 -71493631 + CT-rich Low_complexity Low_complexity 2 67 0 378 0 0 0 chr20 660251 660293 -71493589 + (CA)n Simple_repeat Simple_repeat 1 42 0 429 20 0 0 chr20 660540 660590 -71493292 + (TG)n Simple_repeat Simple_repeat 2 51 0 202 138 69 35 chr20 661444 661502 -71492380 + (CGCGG)n Simple_repeat Simple_repeat 2 61 0 413 306 6 30 chr20 661816 662038 -71491844 + GA-rich Low_complexity Low_complexity 4 211 0 209 176 0 0 chr20 662620 662654 -71491228 + G-rich Low_complexity Low_complexity 3 36 0 1818 149 0 35 chr20 663146 663457 -71490425 + AluJo SINE Alu 8 308 0 1555 97 5 5 chr20 663744 663951 -71489931 - AluSq SINE Alu -16 297 91 389 256 99 19 chr20 664014 664276 -71489606 + L2 LINE L2 2856 3200 -72 883 232 11 0 chr20 664301 664486 -71489396 + MIR SINE MIR 59 245 -17 638 270 110 30 chr20 664610 664910 -71488972 - L2 LINE L2 -103 3210 2887 207 69 0 0 chr20 664971 665000 -71488882 + (TGAA)n Simple_repeat Simple_repeat 3 31 0 356 288 181 51 chr20 665681 665973 -71487909 + L1ME4a LINE L1 5624 5953 -168 2368 92 0 0 chr20 666061 666353 -71487529 + AluSc SINE Alu 1 292 -17 789 217 118 28 chr20 666620 666832 -71487050 + MIR SINE MIR 32 262 0 205 300 0 17 chr20 666830 666890 -71486992 - MIR SINE MIR -56 206 148 * 328 239 216 8 chr20 667237 667371 -71486511 + MIR3 SINE MIR 20 181 -27 923 281 109 12 chr20 667646 668069 -71485813 - LTR16B LTR ERVL 0 464 1 945 266 20 4 chr20 668087 668339 -71485543 - MIR SINE MIR -5 257 2 237 235 147 29 chr20 668492 668594 -71485288 + L2 LINE L2 2889 3002 -270 920 244 33 8 chr20 668660 668902 -71484980 - MIR SINE MIR -5 257 10 371 259 36 36 chr20 669000 669112 -71484770 + L2 LINE L2 3201 3312 -1 2401 109 0 0 chr20 669281 669592 -71484290 + AluSx SINE Alu 1 311 -1 1881 173 7 3 chr20 669865 670171 -71483711 - AluJo SINE Alu -5 307 1 402 283 17 0 chr20 670171 670300 -71483582 + MIR SINE MIR 43 175 -62 181 276 19 67 chr20 670344 670449 -71483433 - MIR3 SINE MIR -27 181 82 345 324 150 19 chr20 670866 671079 -71482803 + MIR SINE MIR 22 262 0 291 279 45 9 chr20 671301 671412 -71482470 - MIR SINE MIR -58 204 90 1914 155 13 10 chr20 671413 671548 -71482334 + AluSx SINE Alu 1 134 -178 441 0 0 0 chr20 671548 671597 -71482285 + (TAA)n Simple_repeat Simple_repeat 2 50 0 1914 155 13 10 chr20 671597 671795 -71482087 + AluSx SINE Alu 134 312 0 802 280 85 0 chr20 671824 672010 -71481872 - L2 LINE L2 -14 3299 3081 2719 30 0 0 chr20 672010 672308 -71481574 + AluY SINE Alu 1 298 -13 802 280 85 0 chr20 672308 672392 -71481490 - L2 LINE L2 -232 3081 3006 334 250 52 59 chr20 672575 672711 -71481171 + MIR SINE MIR 93 227 -35 466 320 31 35 chr20 672888 673116 -71480766 + LTR67 LTR ERVL 236 462 -95 284 293 71 0 chr20 673292 673391 -71480491 + L2 LINE L2 3208 3313 0 588 341 14 9 chr20 673397 673611 -71480271 - L3 LINE CR1 -398 1179 965 476 281 43 7 chr20 673753 673892 -71479990 + MER117 DNA MER1_type 1 144 -53 1308 172 15 11 chr20 673931 674198 -71479684 + Charlie4 DNA MER1_type 8 275 -1686 264 282 128 40 chr20 674383 674532 -71479350 - L2 LINE L2 -196 3076 2915 390 316 11 17 chr20 675407 675584 -71478298 + MIR SINE MIR 9 184 -78 467 208 87 54 chr20 675658 675807 -71478075 - L2 LINE L2 0 3313 3160 495 253 139 21 chr20 675822 676016 -71477866 + L1MC4 LINE L1 5620 5836 -1972 357 150 0 0 chr20 676026 676086 -71477796 - FLAM_A SINE Alu 0 133 74 5802 217 70 33 chr20 676486 676671 -71477211 + L1MC4 LINE L1 6459 6636 -1406 423 0 0 0 chr20 676671 676718 -71477164 + (TG)n Simple_repeat Simple_repeat 1 47 0 5802 217 70 33 chr20 676718 678058 -71475824 + L1MC4 LINE L1 6636 8040 -2 613 283 62 0 chr20 678076 678316 -71475566 - L2 LINE L2 -152 3161 2907 953 211 29 5 chr20 678316 678525 -71475357 - MLT1E2 LTR MaLR 0 626 413 240 111 0 0 chr20 678525 678561 -71475321 + (T)n Simple_repeat Simple_repeat 1 36 0 1428 206 45 13 chr20 678571 678950 -71474932 - HUERS-P3 LTR ERV1 -8453 466 1 617 157 35 76 chr20 678950 679122 -71474760 - LTR19C LTR ERV1 0 779 615 * 780 207 181 50 chr20 679097 679362 -71474520 - MLT1E2 LTR MaLR -178 448 138 2508 131 33 17 chr20 679362 679590 -71474292 - MSTB LTR MaLR 0 426 186 2131 142 0 6 chr20 679590 679901 -71473981 - AluSx SINE Alu -3 309 1 2508 131 33 17 chr20 679901 680091 -71473791 - MSTB LTR MaLR -240 186 1 780 207 181 50 chr20 680091 680124 -71473758 - MLT1E2 LTR MaLR -488 138 111 451 156 142 78 chr20 680123 680264 -71473618 - MLT1E2 LTR MaLR -504 150 1 * 236 203 51 0 chr20 680266 680345 -71473537 - L2 LINE L2 -360 2912 2830 320 283 22 22 chr20 681046 681184 -71472698 - L1MC4a LINE L1 -1910 5898 5761 949 268 92 9 chr20 681422 681993 -71471889 - L1MC4a LINE L1 -461 5701 5067 768 219 128 45 chr20 682001 682026 -71471856 - L1ME4a LINE L1 -153 5968 5946 2429 73 0 7 chr20 682026 682329 -71471553 - AluY SINE Alu -9 302 2 768 219 128 45 chr20 682329 682677 -71471205 - L1ME4a LINE L1 -175 5946 5564 1714 128 23 79 chr20 683120 683425 -71470457 - AluJb SINE Alu -20 292 5 324 249 76 49 chr20 683612 683797 -71470085 - MER113 DNA MER1_type? -331 190 1 330 258 23 62 chr20 684018 684146 -71469736 - MIR SINE MIR -71 191 69 208 301 49 65 chr20 684264 684387 -71469495 - MIR SINE MIR 0 262 142 374 287 19 83 chr20 684422 684638 -71469244 - L2 LINE L2 -93 3220 3019 2519 81 0 3 chr20 684783 685090 -71468792 + AluSx SINE Alu 1 306 -6 370 253 44 0 chr20 685378 685469 -71468413 + MER91A DNA MER1_type 102 196 0 200 283 33 0 chr20 686234 686294 -71467588 - MIR SINE MIR -122 140 79 1725 138 18 25 chr20 686492 686774 -71467108 - AluJo SINE Alu -2 310 31 262 260 26 13 chr20 686911 686988 -71466894 + GA-rich Low_complexity Low_complexity 4 81 0 1790 89 133 0 chr20 687014 687262 -71466620 + AluSp SINE Alu 1 281 -32 207 0 0 0 chr20 687262 687285 -71466597 + (CAAT)n Simple_repeat Simple_repeat 4 26 0 185 91 0 30 chr20 687300 687333 -71466549 + (GGAA)n Simple_repeat Simple_repeat 2 33 0 654 270 11 0 chr20 687880 688065 -71465817 + MIR SINE MIR 43 229 -33 873 264 231 19 chr20 688301 688412 -71465470 + MLT1G LTR MaLR 10 96 -494 2176 75 24 27 chr20 688412 688725 -71465157 + AluSx SINE Alu 1 312 0 873 264 231 19 chr20 688725 689065 -71464817 + MLT1G LTR MaLR 96 588 -2 561 284 27 0 chr20 689069 689217 -71464665 - MIR SINE MIR -62 200 49 1482 255 56 33 chr20 689730 690158 -71463724 - MLT1J LTR MaLR 0 511 74 284 340 78 5 chr20 690234 690425 -71463457 + L2 LINE L2 2684 2888 -426 2236 119 3 0 chr20 690924 691217 -71462665 - AluSp SINE Alu -19 294 1 274 246 111 18 chr20 691218 691335 -71462547 - MIR SINE MIR -67 141 25 363 246 97 15 chr20 691409 691543 -71462339 - MIR3 SINE MIR -41 167 23 555 199 7 59 chr20 691555 691691 -71462191 - L2 LINE L2 -2 3311 3183 733 275 83 29 chr20 691785 692170 -71461712 - L2 LINE L2 -79 3234 2829 278 241 89 0 chr20 692702 692781 -71461101 + MIR3 SINE MIR 81 166 -42 838 244 43 26 chr20 692789 693019 -71460863 + MIR SINE MIR 29 262 0 363 295 108 23 chr20 693234 693363 -71460519 - MIR3 SINE MIR -27 181 42 1847 157 0 32 chr20 694102 694414 -71459468 - AluJo SINE Alu -10 302 1 282 227 213 57 chr20 694422 694563 -71459319 - MIR SINE MIR -17 245 83 2162 206 23 59 chr20 694699 695272 -71458610 + MER92C LTR ERV1 1 552 -2 185 318 94 57 chr20 695303 695495 -71458387 + MIR SINE MIR 63 261 -1 30 27 0 0 chr20 695881 695918 -71457964 + GC_rich Low_complexity Low_complexity 1 37 0 22 0 0 0 chr20 696000 696022 -71457860 + GC_rich Low_complexity Low_complexity 1 22 0 216 0 0 0 chr20 696972 696996 -71456886 + (TG)n Simple_repeat Simple_repeat 2 25 0 209 59 59 0 chr20 698306 698340 -71455542 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 6365 234 82 48 chr20 698415 698563 -71455319 - L1MEc LINE L1 -3573 2642 2501 2361 94 0 7 chr20 698563 698860 -71455022 - AluSg SINE Alu -15 295 1 6365 234 82 48 chr20 698860 699391 -71454491 - L1MEc LINE L1 -3714 2501 1990 2161 113 25 0 chr20 699391 699674 -71454208 + AluSx SINE Alu 3 292 -20 6365 234 82 48 chr20 699674 701516 -71452366 - L1MEc LINE L1 -4225 1990 40 768 245 57 74 chr20 701518 701960 -71451922 - L2 LINE L2 -275 3038 2583 359 266 22 36 chr20 701981 702120 -71451762 + L1ME3A LINE L1 5991 6127 -43 631 279 11 0 chr20 702197 702380 -71451502 - L2 LINE L2 -710 2604 2420 275 296 99 0 chr20 702374 702455 -71451427 - MIR SINE MIR -17 245 157 * 803 290 120 3 chr20 702471 702771 -71451111 + MLT1K LTR MaLR 254 588 0 1900 170 3 0 chr20 702855 703143 -71450739 - AluJo SINE Alu -23 289 1 293 355 29 6 chr20 703494 703666 -71450216 + L2 LINE L2 2917 3092 -180 316 258 45 38 chr20 703845 703977 -71449905 + MIR3 SINE MIR 15 147 -61 726 228 151 15 chr20 703977 704183 -71449699 + MIR SINE MIR 2 235 -27 466 223 17 0 chr20 704291 704414 -71449468 + MIR3 SINE MIR 31 158 -50 2376 67 3 3 chr20 704527 704856 -71449026 + AluSq SINE Alu 1 329 0 221 327 44 0 chr20 705269 705382 -71448500 + MIR SINE MIR 34 151 -57 278 313 133 5 chr20 705434 705630 -71448252 - LTR16B LTR ERVL -228 222 3 205 273 0 0 chr20 706127 706171 -71447711 + (CA)n Simple_repeat Simple_repeat 2 45 0 528 239 159 0 chr20 706218 706381 -71447501 - MER5A DNA MER1_type 0 189 1 456 324 96 7 chr20 706460 706769 -71447113 - LTR16B LTR ERVL -136 328 31 323 299 95 7 chr20 706795 706932 -71446950 - MIR SINE MIR -22 240 92 266 214 135 0 chr20 707006 707095 -71446787 - MIR SINE MIR -112 150 50 194 196 0 43 chr20 707185 707231 -71446651 - MIR SINE MIR -59 149 106 1420 226 164 5 chr20 707827 708216 -71445666 + MLT1F1 LTR MaLR 109 559 -8 482 274 38 0 chr20 709164 709365 -71444517 + CT-rich Low_complexity Low_complexity 1 208 0 710 253 6 0 chr20 709370 709532 -71444350 + MIR SINE MIR 10 172 -90 520 223 122 0 chr20 710085 710224 -71443658 - MIR SINE MIR -19 243 88 189 0 0 0 chr20 710224 710245 -71443637 + (TGAA)n Simple_repeat Simple_repeat 1 21 0 213 261 0 31 chr20 710282 710347 -71443535 - MIR SINE MIR -103 105 43 2419 96 0 0 chr20 710506 710808 -71443074 - AluSx SINE Alu -10 302 1 401 210 0 0 chr20 710827 710908 -71442974 - MIR SINE MIR -111 151 71 200 139 0 23 chr20 711167 711210 -71442672 + (TTCC)n Simple_repeat Simple_repeat 3 44 0 403 58 0 0 chr20 711248 711300 -71442582 + Alu SINE Alu 1 52 -258 2532 84 3 0 chr20 711580 711891 -71441991 + AluSp SINE Alu 1 312 -1 264 307 58 2 chr20 712040 712168 -71441714 - MIR SINE MIR -55 153 50 221 271 32 47 chr20 712223 712335 -71441547 - MIR SINE MIR -85 123 13 805 190 226 0 chr20 712403 712624 -71441258 - LTR37B LTR ERV1 -1 467 197 387 236 0 11 chr20 712687 712776 -71441106 - LTR37B LTR ERV1 -377 91 4 302 60 100 0 chr20 713350 713450 -71440432 + (TA)n Simple_repeat Simple_repeat 2 111 0 315 49 0 0 chr20 713450 713491 -71440391 + (GA)n Simple_repeat Simple_repeat 2 42 0 2333 38 0 45 chr20 713491 713782 -71440100 - AluSp SINE Alu -34 279 2 212 236 121 73 chr20 715039 715204 -71438678 + L2 LINE L2 2569 2741 -573 2071 120 33 10 chr20 715270 715570 -71438312 + AluSx SINE Alu 1 307 -5 291 28 0 0 chr20 715597 715633 -71438249 + (TCC)n Simple_repeat Simple_repeat 1 36 0 1676 117 140 0 chr20 715633 715898 -71437984 - AluSx SINE Alu 0 302 1 1251 246 35 85 chr20 715899 716092 -71437790 - MLT1J LTR MaLR -67 444 282 2220 106 3 0 chr20 716092 716385 -71437497 - AluY SINE Alu -17 294 1 1251 246 35 85 chr20 716385 716614 -71437268 - MLT1J LTR MaLR -229 282 43 2317 110 0 0 chr20 716624 716916 -71436966 + AluSx SINE Alu 1 292 -20 929 270 25 0 chr20 716970 717211 -71436671 + L1MC4a LINE L1 5619 5865 -1943 1893 224 49 29 chr20 717213 717723 -71436159 + L1ME2 LINE L1 5564 6083 -81 288 296 107 34 chr20 718556 718606 -71435276 - L2 LINE L2 -79 3234 3189 1356 216 82 44 chr20 718606 719019 -71434863 + MLT1C LTR MaLR 1 434 -33 2062 159 0 9 chr20 719019 719334 -71434548 - AluSx SINE Alu 0 312 1 1356 216 82 44 chr20 719334 719370 -71434512 + MLT1C LTR MaLR 434 467 0 288 296 107 34 chr20 719370 719425 -71434457 - L2 LINE L2 -124 3189 3139 279 0 0 0 chr20 719425 719456 -71434426 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 288 296 107 34 chr20 719456 719555 -71434327 - L2 LINE L2 -174 3139 3014 252 0 0 0 chr20 720462 720490 -71433392 + (TG)n Simple_repeat Simple_repeat 2 29 0 523 182 0 0 chr20 720496 720584 -71433298 - FLAM_A SINE Alu -25 117 30 615 171 17 0 chr20 720604 720721 -71433161 - L1ME1 LINE L1 -56 6110 5992 2144 138 7 0 chr20 720775 721079 -71432803 + AluSx SINE Alu 1 306 -6 289 197 30 0 chr20 721086 721152 -71432730 + MLT1C LTR MaLR 40 107 -398 767 273 66 9 chr20 721152 721379 -71432503 + MLT1C LTR MaLR 228 467 0 1834 210 18 13 chr20 721379 721775 -71432107 - L1ME1 LINE L1 -187 5979 5582 1171 140 0 17 chr20 721775 721953 -71431929 + AluSg/x SINE Alu 133 307 -5 1845 161 0 13 chr20 721969 722267 -71431615 + AluJb SINE Alu 12 305 -7 317 137 0 0 chr20 722267 722318 -71431564 - L1ME1 LINE L1 -773 5586 5536 1141 130 243 45 chr20 722356 722603 -71431279 + AluYa5 SINE Alu 1 296 -15 244 160 160 40 chr20 722613 722688 -71431194 + MIR SINE MIR 150 233 -29 344 289 84 22 chr20 722833 723116 -71430766 - LTR16A LTR ERVL -2 448 123 375 273 62 45 chr20 723146 723322 -71430560 - Charlie8 DNA MER1_type -2226 191 13 2323 100 10 3 chr20 723345 723476 -71430406 + AluSq SINE Alu 1 130 -183 324 0 0 0 chr20 723476 723512 -71430370 + (TAA)n Simple_repeat Simple_repeat 2 37 0 2323 100 10 3 chr20 723512 723691 -71430191 + AluSq SINE Alu 130 313 0 198 309 37 12 chr20 723764 723845 -71430037 + L2 LINE L2 3189 3271 -42 916 157 28 15 chr20 723933 724132 -71429750 + L1M4 LINE L1 5290 5492 -686 2554 72 3 0 chr20 724154 724461 -71429421 + AluSp SINE Alu 1 308 -5 724 254 11 37 chr20 724469 724658 -71429224 + MIR SINE MIR 77 260 -2 494 281 33 0 chr20 724674 724827 -71429055 + MIR SINE MIR 51 208 -54 802 177 10 62 chr20 725920 726112 -71427770 - MIR SINE MIR 0 262 81 1022 201 7 126 chr20 726142 726436 -71427446 - LTR8 LTR ERV1 -272 419 161 269 111 44 0 chr20 726428 726473 -71427409 - LTR8A LTR ERV1 -680 47 1 * 253 338 0 0 chr20 726473 726550 -71427332 - MIR SINE MIR -178 84 8 2370 99 0 0 chr20 726788 727090 -71426792 + AluSg SINE Alu 1 302 -8 2095 142 3 3 chr20 727168 727471 -71426411 + AluSx SINE Alu 1 303 -9 2008 122 165 8 chr20 727474 727844 -71426038 + MSTA LTR MaLR 1 428 0 787 213 77 0 chr20 727913 728082 -71425800 - MER63A DNA MER1_type -18 192 11 567 272 7 0 chr20 728119 728255 -71425627 + MIR SINE MIR 2 138 -124 396 0 0 0 chr20 728973 729017 -71424865 + (TC)n Simple_repeat Simple_repeat 1 44 0 279 0 0 0 chr20 729016 729047 -71424835 + (CA)n Simple_repeat Simple_repeat 1 31 0 * 431 282 127 12 chr20 729214 729466 -71424416 + L2 LINE L2 2695 2975 -339 432 265 116 7 chr20 729524 729671 -71424211 + MIR SINE MIR 35 197 -65 325 268 187 28 chr20 729683 729831 -71424051 + MLT1G1 LTR MaLR 3 216 -379 3752 244 21 14 chr20 729831 730648 -71423234 + L1M4b LINE L1 3 825 -6034 3140 235 41 91 chr20 730653 730876 -71423006 + L1M4b LINE L1 1330 1563 -5394 2380 108 0 0 chr20 730876 731181 -71422701 + AluSx SINE Alu 1 305 -7 3140 235 41 91 chr20 731181 732433 -71421449 + L1M4b LINE L1 1563 2876 -4081 1614 161 19 58 chr20 732433 732744 -71421138 + AluSx SINE Alu 3 301 -11 3140 235 41 91 chr20 732744 732893 -71420989 + L1M4b LINE L1 2876 3031 -3926 2345 121 0 3 chr20 732893 733206 -71420676 + AluSx SINE Alu 1 312 0 3140 235 41 91 chr20 733206 733816 -71420066 + L1M4b LINE L1 3031 3670 -3287 2531 80 3 0 chr20 733816 734128 -71419754 + AluSp SINE Alu 1 313 0 3140 235 41 91 chr20 734128 734289 -71419593 + L1M4b LINE L1 3670 3565 -3392 2132 141 3 0 chr20 734289 734594 -71419288 - AluSx SINE Alu -4 308 3 3140 235 41 91 chr20 734594 734870 -71419012 + L1M4b LINE L1 3564 3852 -3105 2341 114 3 0 chr20 734871 735178 -71418704 + AluSx SINE Alu 1 308 -4 1265 117 11 0 chr20 735242 735450 -71418432 + AluY SINE Alu 119 311 0 1368 214 79 66 chr20 735452 735553 -71418329 + L1M4b LINE L1 3904 4002 -2955 2165 145 0 0 chr20 735553 735864 -71418018 + AluSx SINE Alu 1 311 -1 1368 214 79 66 chr20 735864 736066 -71417816 + L1M4b LINE L1 4002 4200 -2757 2229 125 0 3 chr20 736066 736378 -71417504 + AluY SINE Alu 1 311 0 1368 214 79 66 chr20 736378 736591 -71417291 + L1M4b LINE L1 4200 4428 -2529 875 225 51 63 chr20 736595 736966 -71416916 - MLT1H LTR MaLR -194 348 15 1992 115 62 42 chr20 737011 737325 -71416557 + THE1B LTR MaLR 1 325 -39 2122 108 7 0 chr20 737325 737657 -71416225 - AluSg SINE Alu 0 334 1 1992 115 62 42 chr20 737657 737698 -71416184 + THE1B LTR MaLR 325 364 0 223 238 0 32 chr20 737846 737909 -71415973 + MIR SINE MIR 161 221 -41 219 302 0 0 chr20 737957 738010 -71415872 + MIR SINE MIR 210 262 0 * 403 367 11 6 chr20 737966 738146 -71415736 - MIR SINE MIR -33 229 49 340 344 32 11 chr20 738217 738403 -71415479 + L1MC4a LINE L1 5696 5885 -1923 2303 107 7 13 chr20 738625 739040 -71414842 + AluSq SINE Alu 1 313 0 275 311 11 0 chr20 739054 739144 -71414738 - L1ME4a LINE L1 -96 6025 5935 1181 253 49 10 chr20 739146 739454 -71414428 - MLT1J LTR MaLR -181 330 11 1073 133 0 0 chr20 739564 739714 -71414168 - AluSg/x SINE Alu -23 289 140 1389 117 4 46 chr20 739714 739953 -71413929 - MER41B LTR ERV1 -277 358 130 1919 124 37 4 chr20 740394 740704 -71413178 + AluSx SINE Alu 1 319 0 4513 95 32 25 chr20 741079 741121 -71412761 + LTR8 LTR ERV1 2 42 -649 2321 84 14 7 chr20 741121 741418 -71412464 - AluSp SINE Alu -14 299 1 4513 95 32 25 chr20 741418 742060 -71411822 + LTR8 LTR ERV1 42 691 0 2319 114 3 0 chr20 742427 742724 -71411158 - AluSp SINE Alu -15 298 1 2156 144 0 10 chr20 742724 743029 -71410853 - AluJo SINE Alu -10 302 1 465 273 39 0 chr20 743211 743339 -71410543 - MIR SINE MIR -11 251 119 2996 158 74 31 chr20 743635 744093 -71409789 + MER67C LTR ERV1 1 497 -213 2187 124 14 0 chr20 744093 744384 -71409498 - AluSx SINE Alu -17 295 1 2996 158 74 31 chr20 744384 744572 -71409310 + MER67C LTR ERV1 497 675 -35 286 287 248 6 chr20 744599 744756 -71409126 + L1MC4a LINE L1 5741 5935 -1873 306 0 0 0 chr20 744824 744858 -71409024 + (TG)n Simple_repeat Simple_repeat 2 35 0 1932 155 3 10 chr20 745031 745328 -71408554 + AluSx SINE Alu 1 295 -17 1252 112 0 0 chr20 745328 745489 -71408393 + AluSg/x SINE Alu 134 294 -18 1994 138 24 14 chr20 745599 745895 -71407987 - AluSx SINE Alu -8 304 6 390 209 29 38 chr20 746458 746563 -71407319 - MIR SINE MIR -92 170 67 229 286 36 0 chr20 747906 747962 -71405920 + MIR SINE MIR 26 83 -179 728 287 63 4 chr20 749021 749258 -71404624 - MIR SINE MIR 0 262 12 289 346 76 11 chr20 750031 750216 -71403666 - MIR SINE MIR -52 210 14 1125 221 86 93 chr20 750432 751011 -71402871 + MER34C LTR ERV1 11 585 0 2064 128 14 0 chr20 751789 752085 -71401797 - AluSp SINE Alu -13 300 1 2168 75 78 8 chr20 752279 752647 -71401235 + LTR7 LTR ERV1 1 450 0 329 257 107 59 chr20 752647 753181 -71400701 + L1MC4a LINE L1 5260 6006 -1802 2241 108 3 0 chr20 753211 753506 -71400376 - AluY SINE Alu -15 296 1 703 281 31 4 chr20 753799 754027 -71399855 + MIR SINE MIR 29 262 0 218 329 162 9 chr20 754712 754928 -71398954 + L2 LINE L2 2933 3181 -91 589 233 135 10 chr20 755210 755403 -71398479 + MIR SINE MIR 32 248 -14 2339 109 0 0 chr20 755466 755770 -71398112 + AluSx SINE Alu 1 304 -8 775 228 112 94 chr20 755777 755903 -71397979 + MLT1J LTR MaLR 71 193 -318 2708 116 76 48 chr20 755903 756007 -71397875 - MER75 DNA T2_type 0 514 414 2085 123 3 7 chr20 756007 756309 -71397573 - AluSx SINE Alu -11 301 1 2708 116 76 48 chr20 756309 756704 -71397178 - MER75 DNA T2_type -100 414 1 775 228 112 94 chr20 756704 756971 -71396911 + MLT1J LTR MaLR 193 471 -40 1978 156 0 25 chr20 756989 757309 -71396573 + AluSx SINE Alu 1 312 0 209 196 0 0 chr20 758433 758479 -71395403 + T-rich Low_complexity Low_complexity 3 48 0 207 244 77 48 chr20 758499 758656 -71395226 - L2 LINE L2 0 3313 3111 447 224 105 107 chr20 758690 759067 -71394815 - L2 LINE L2 -298 3015 2616 639 224 88 43 chr20 759129 759325 -71394557 - MIR SINE MIR -32 230 30 219 264 61 74 chr20 759779 759927 -71393955 + L2 LINE L2 3077 3222 -91 241 277 8 46 chr20 760330 760460 -71393422 + GA-rich Low_complexity Low_complexity 2 126 0 248 284 12 25 chr20 760606 760687 -71393195 - MIR3 SINE MIR -37 171 92 287 296 0 0 chr20 760736 760807 -71393075 + MIR SINE MIR 73 143 -119 1926 155 3 19 chr20 761119 761429 -71392453 - AluJb SINE Alu -6 306 2 234 218 18 0 chr20 762174 762229 -71391653 + MIR SINE MIR 115 170 -92 611 279 53 0 chr20 762239 762429 -71391453 - MIR SINE MIR -2 260 61 2061 165 93 89 chr20 762463 762804 -71391078 - LTR8A LTR ERV1 0 727 381 2238 113 0 0 chr20 762804 763096 -71390786 + AluSx SINE Alu 1 292 -20 234 29 29 0 chr20 763096 763130 -71390752 + (CAAA)n Simple_repeat Simple_repeat 2 68 0 2061 165 93 89 chr20 763130 763326 -71390556 - LTR8A LTR ERV1 -346 381 187 201 333 0 0 chr20 763396 763453 -71390429 + MIR SINE MIR 200 256 -6 1216 221 129 52 chr20 763621 763860 -71390022 + MER34C LTR ERV1 1 220 -365 2031 109 3 3 chr20 763860 764154 -71389728 - AluSq SINE Alu -8 305 12 1216 221 129 52 chr20 764154 764457 -71389425 + MER34C LTR ERV1 220 585 0 379 111 32 0 chr20 764479 764542 -71389340 + LTR24B LTR ERV1 8 72 -504 782 188 78 0 chr20 764575 764729 -71389153 - FRAM SINE Alu 0 166 1 1308 52 6 0 chr20 764731 764903 -71388979 + LTR19-int LTR ERV1 2085 2257 -3329 301 233 186 0 chr20 764903 764989 -71388893 - LTR8 LTR ERV1 -434 257 156 3137 53 30 30 chr20 764989 765190 -71388692 + LTR19-int LTR ERV1 2346 2546 -3040 2007 105 14 3 chr20 765190 765486 -71388396 + AluSq SINE Alu 1 299 -14 3137 53 30 30 chr20 765486 765720 -71388162 + LTR19-int LTR ERV1 2545 2781 -2805 * 10991 52 40 13 chr20 765718 766211 -71387671 - LTR19-int LTR ERV1 -1329 4257 3779 2209 91 3 10 chr20 766211 766519 -71387363 + AluSp SINE Alu 1 306 -7 10991 52 40 13 chr20 766519 767146 -71386736 - LTR19-int LTR ERV1 -1807 3779 3085 2095 96 7 7 chr20 767146 767439 -71386443 - AluY SINE Alu -18 293 1 10991 52 40 13 chr20 767439 767778 -71386104 - LTR19-int LTR ERV1 -2501 3085 2757 2036 107 4 0 chr20 767812 768093 -71385789 + AluSq SINE Alu 1 282 -31 8914 78 27 16 chr20 768102 768458 -71385424 + LTR19A-int LTR ERV1 4380 4731 -855 2106 121 3 7 chr20 768458 768765 -71385117 + AluSx SINE Alu 1 306 -6 8914 78 27 16 chr20 768765 769602 -71384280 + LTR19A-int LTR ERV1 4731 5586 0 3571 86 15 0 chr20 769602 770081 -71383801 + LTR19A LTR ERV1 1 486 0 3571 137 7 6 chr20 770102 770648 -71383234 - LTR10A LTR ERV1 -62 547 1 6843 182 23 21 chr20 770693 773089 -71380793 - LTR10A-int LTR ERV1 0 6649 4190 2161 69 0 0 chr20 773090 773364 -71380518 - AluSg SINE Alu -4 306 33 810 63 18 0 chr20 773364 773475 -71380407 - AluY SINE Alu -14 297 185 2430 253 54 12 chr20 773479 774073 -71379809 - HERVI LTR ERV1 -2456 5329 4711 * 5025 80 27 0 chr20 774040 774778 -71379104 - HERVI LTR ERV1 -4320 2576 1819 393 216 159 0 chr20 774783 774871 -71379011 + LTR8 LTR ERV1 156 257 -434 567 54 0 0 chr20 774871 774945 -71378937 - Harlequin LTR ERV1 -5178 1718 1645 * 1991 153 3 0 chr20 774944 775244 -71378638 - Harlequin LTR ERV1 -3205 4580 4280 249 204 102 46 chr20 775293 775401 -71378481 + LTR24B LTR ERV1 260 373 -203 2418 135 70 0 chr20 775401 775786 -71378096 - MER84 LTR ERVI 0 507 96 4953 99 34 57 chr20 775786 776583 -71377299 - MER4E LTR ERV1 0 779 1 1130 103 130 5 chr20 776583 776758 -71377124 + MER41B LTR ERV1 434 634 -1 513 66 66 13 chr20 776763 776839 -71377043 - MER84 LTR ERVI -427 80 1 1360 93 15 34 chr20 776896 777100 -71376782 + MER84 LTR ERVI 1 200 -307 1256 140 53 5 chr20 777101 777308 -71376574 + MER4E LTR ERV1 249 465 -314 817 106 0 0 chr20 777365 777469 -71376413 + MER84-int LTR ERV1 2030 2133 -2821 999 185 11 11 chr20 777469 777647 -71376235 + LTR1 LTR ERV1 1 178 -607 1823 167 149 46 chr20 777648 778145 -71375737 + LTR10A LTR ERV1 1 548 -61 772 226 88 33 chr20 778154 778428 -71375454 + LTR10A-int LTR ERV1 1 289 -6360 18573 219 11 28 chr20 778490 785002 -71368880 + LTR10A-int LTR ERV1 501 5708 -941 2250 74 0 35 chr20 785002 785312 -71368570 + AluY SINE Alu 1 299 -12 18573 219 11 28 chr20 785312 786239 -71367643 + LTR10A-int LTR ERV1 5708 6649 0 1850 188 77 70 chr20 786239 786783 -71367099 + LTR10A LTR ERV1 1 548 -61 371 127 0 0 chr20 786796 786851 -71367031 + LTR1 LTR ERV1 176 230 -555 764 170 17 21 chr20 786941 787236 -71366646 + LTR1B LTR ERV1 401 826 0 3961 124 23 20 chr20 787237 787420 -71366462 + MER4A-int LTR ERV1 2131 2312 -2642 1897 120 3 11 chr20 787420 787755 -71366127 + AluSx SINE Alu 1 333 0 3961 124 23 20 chr20 787755 788174 -71365708 + MER4A-int LTR ERV1 2312 2736 -2218 2159 112 0 0 chr20 788174 788470 -71365412 + AluSq SINE Alu 1 296 -17 17067 137 99 79 chr20 788579 789162 -71364720 + MER4A-int LTR ERV1 189 759 -5839 4668 122 19 59 chr20 789162 789451 -71364431 - MER4E LTR ERV1 0 779 480 1844 134 0 7 chr20 789451 789762 -71364120 - AluSx SINE Alu 0 309 1 4668 122 19 59 chr20 789762 790282 -71363600 - MER4E LTR ERV1 -299 480 2 17067 137 99 79 chr20 790282 790490 -71363392 + MER4A-int LTR ERV1 759 961 -5637 1201 170 14 0 chr20 790490 790702 -71363180 - AluSg/x SINE Alu -13 299 85 17067 137 99 79 chr20 790702 793078 -71360804 + MER4A-int LTR ERV1 961 3288 -3310 1997 120 3 0 chr20 793078 793384 -71360498 - AluSx SINE Alu 0 307 1 17067 137 99 79 chr20 793384 793402 -71360480 + MER4A-int LTR ERV1 3288 3304 -3294 2000 116 0 52 chr20 793402 793730 -71360152 - AluSx SINE Alu -1 311 1 17067 137 99 79 chr20 793730 794389 -71359493 + MER4A-int LTR ERV1 3304 3948 -2650 189 0 0 0 chr20 794389 794410 -71359472 + (TTA)n Simple_repeat Simple_repeat 1 21 0 17067 137 99 79 chr20 794410 795666 -71358216 + MER4A-int LTR ERV1 3948 6598 0 3154 130 121 47 chr20 795667 796286 -71357596 + MER4A LTR ERV1 1 465 0 2368 138 0 22 chr20 796286 796585 -71357297 + MER84 LTR ERVI 146 437 -70 2158 125 3 0 chr20 796585 796890 -71356992 - AluSq SINE Alu -6 307 2 2368 138 0 22 chr20 796890 796960 -71356922 + MER84 LTR ERVI 437 507 0 181 238 0 0 chr20 797128 797170 -71356712 - L3b LINE CR1 -198 1385 1344 212 145 0 48 chr20 797211 797246 -71356636 + (TTTAA)n Simple_repeat Simple_repeat 1 33 -26 2115 116 0 0 chr20 797246 797540 -71356342 - AluSq SINE Alu -19 294 1 212 145 0 48 chr20 797540 797566 -71356316 + (TTTAA)n Simple_repeat Simple_repeat 33 59 0 3784 177 39 58 chr20 797698 798671 -71355211 - LTR5 LTR ERVK -14 955 1 2090 132 3 0 chr20 798683 798994 -71354888 - AluSx SINE Alu 0 312 1 4032 134 3 23 chr20 799050 799698 -71354184 + MER41B LTR ERV1 1 635 0 231 369 18 18 chr20 799740 799851 -71354031 + L2 LINE L2 2941 3051 -221 2268 106 0 0 chr20 799992 800304 -71353578 - AluSp SINE Alu -1 312 1 1551 182 0 24 chr20 800356 800678 -71353204 - AluSx SINE Alu 0 315 1 636 232 55 76 chr20 800840 801129 -71352753 - L2 LINE L2 0 3313 3031 249 264 98 52 chr20 801276 801368 -71352514 - L1MC/D LINE L1 -2003 5805 5719 1903 125 14 0 chr20 801368 801665 -71352217 + AluSx SINE Alu 1 301 -11 249 264 98 52 chr20 801665 801746 -71352136 - L1MC/D LINE L1 -2089 5719 5624 287 218 117 5 chr20 802386 802495 -71351387 + AluJ/monomer SINE Alu 1 51 -251 324 48 0 0 chr20 802574 802616 -71351266 + (TG)n Simple_repeat Simple_repeat 1 42 0 1814 84 0 0 chr20 802616 802854 -71351028 - AluSg SINE Alu -33 277 40 1722 82 0 41 chr20 803050 803295 -71350587 - AluSq SINE Alu -78 235 1 222 86 0 0 chr20 803387 803417 -71350465 + (A)n Simple_repeat Simple_repeat 1 31 0 2121 123 0 0 chr20 803417 803727 -71350155 + AluSg SINE Alu 1 310 0 457 340 39 0 chr20 803748 803904 -71349978 + L3 LINE CR1 967 1128 -449 2169 60 39 0 chr20 804339 804623 -71349259 - AluSp SINE Alu -14 299 5 1894 55 65 31 chr20 804640 804932 -71348950 - AluY SINE Alu -9 302 1 742 190 17 0 chr20 805089 805263 -71348619 + CT-rich Low_complexity Low_complexity 4 180 0 1899 76 8 4 chr20 805268 805519 -71348363 - AluSx SINE Alu -23 289 38 187 228 139 0 chr20 805576 805677 -71348205 - L2 LINE L2 -814 2500 2386 619 138 36 7 chr20 806285 806423 -71347459 + CT-rich Low_complexity Low_complexity 3 144 0 1839 164 3 3 chr20 806425 806737 -71347145 - AluJb SINE Alu 0 312 1 334 267 176 6 chr20 806771 806947 -71346935 - L1MC4 LINE L1 -8 8034 7829 330 272 215 21 chr20 807030 807309 -71346573 + MER113 DNA MER1_type? 126 458 -63 685 303 56 19 chr20 807641 807908 -71345974 + L2 LINE L2 2994 3270 -2 2449 65 0 7 chr20 808004 808311 -71345571 - AluSq SINE Alu -8 305 1 532 266 89 87 chr20 808311 808750 -71345132 - L2 LINE L2 -3 3269 2830 220 279 25 0 chr20 809492 809571 -71344311 + MIR SINE MIR 67 147 -61 549 237 18 18 chr20 809626 809795 -71344087 + MER113 DNA MER1_type? 81 249 -272 1041 212 108 7 chr20 809798 810067 -71343815 + L1ME1 LINE L1 5871 6166 0 2083 115 10 10 chr20 810150 810462 -71343420 + AluSx SINE Alu 1 312 0 825 233 11 5 chr20 810513 810713 -71343169 + MLT1A2 LTR MaLR 188 389 -1 2042 132 0 19 chr20 811121 811432 -71342450 - AluSx SINE Alu -7 305 1 398 241 28 0 chr20 811483 811591 -71342291 + MER103 DNA DNA 2 112 -54 619 256 38 76 chr20 811734 811972 -71341910 - L2 LINE L2 -250 3063 2835 294 264 11 44 chr20 812151 812179 -71341703 - MIR SINE MIR -80 182 155 2271 120 22 27 chr20 812179 812545 -71341337 + THE1B LTR MaLR 1 364 0 294 264 11 44 chr20 812545 812607 -71341275 - MIR SINE MIR -107 155 95 225 98 0 73 chr20 812688 812729 -71341153 - MER5B DNA MER1_type -3 175 138 1002 208 162 8 chr20 812729 813051 -71340831 + MLT1F LTR MaLR 2 415 -127 1463 125 30 106 chr20 813155 813484 -71340398 + AluYb8 SINE Alu 1 304 -14 2324 81 37 0 chr20 813633 813930 -71339952 + AluSp SINE Alu 1 308 -5 1744 171 27 10 chr20 813939 814237 -71339645 + AluJb SINE Alu 1 303 -9 2363 107 0 0 chr20 814433 814733 -71339149 - AluSq SINE Alu -13 300 1 1644 227 117 24 chr20 815591 816053 -71337829 + MER69 DNA AcHobo 77 581 -645 328 191 55 22 chr20 816035 816113 -71337769 + MER69 DNA AcHobo 2279 2353 -173 * 1868 135 3 45 chr20 816113 816288 -71337594 - AluJo SINE Alu -3 309 151 2183 138 6 3 chr20 816288 816599 -71337283 - AluSx SINE Alu 0 312 1 1868 135 3 45 chr20 816599 816735 -71337147 - AluJo SINE Alu -161 151 11 328 191 55 22 chr20 816735 816824 -71337058 + MER69 DNA AcHobo 2353 2482 -44 2427 103 3 3 chr20 816825 817136 -71336746 + AluSq SINE Alu 1 311 -2 338 314 20 0 chr20 817296 817398 -71336484 + MIR SINE MIR 118 221 -41 1383 182 121 4 chr20 817907 818171 -71335711 + AluJo SINE Alu 5 299 -13 2037 131 28 0 chr20 818228 818518 -71335364 - AluSx SINE Alu -12 300 3 2065 161 3 0 chr20 818576 818887 -71334995 + AluJo SINE Alu 1 312 0 356 242 167 0 chr20 819023 819155 -71334727 - L1ME LINE L1 -347 5774 5621 253 279 0 0 chr20 819202 819270 -71334612 - MIR SINE MIR -92 116 49 245 119 24 0 chr20 819898 819940 -71333942 - MIR SINE MIR -64 144 102 255 325 75 8 chr20 820484 820604 -71333278 - MIR SINE MIR -101 161 34 252 147 250 0 chr20 820863 820931 -71332951 + MER96B DNA MER1_type? 1 85 -332 333 0 0 0 chr20 821015 821052 -71332830 + (TC)n Simple_repeat Simple_repeat 2 38 0 230 217 0 61 chr20 821052 821167 -71332715 - L1MC4 LINE L1 -1339 6703 6596 196 241 19 0 chr20 821168 821222 -71332660 + MIR SINE MIR 65 119 -89 657 231 136 36 chr20 821875 822096 -71331786 - MIR SINE MIR 0 262 20 3603 125 23 33 chr20 822130 822884 -71330998 - L1MB3 LINE L1 -15 6168 5333 2296 98 3 7 chr20 822893 823200 -71330682 - AluSg1 SINE Alu -3 306 1 476 293 75 0 chr20 823385 823518 -71330364 - MIR SINE MIR -97 165 23 183 300 0 0 chr20 823532 823592 -71330290 - L2 LINE L2 -280 2992 2933 874 219 25 15 chr20 823771 823899 -71329983 + L1MC4 LINE L1 7282 7414 -628 749 204 59 0 chr20 823899 824051 -71329831 + FRAM SINE Alu 4 164 -2 874 219 25 15 chr20 824051 824123 -71329759 + L1MC4 LINE L1 7414 7484 -558 239 79 26 0 chr20 824129 824167 -71329715 + (TTTC)n Simple_repeat Simple_repeat 3 41 0 522 249 175 46 chr20 824317 824667 -71329215 - L2 LINE L2 -107 3165 2776 583 95 0 0 chr20 824668 824752 -71329130 - AluY SINE Alu -10 301 218 235 194 14 68 chr20 824833 824907 -71328975 - MIR SINE MIR -61 147 89 982 175 26 5 chr20 825038 825232 -71328650 + MIR SINE MIR 46 243 -19 503 195 27 47 chr20 826643 826792 -71327090 + MIR SINE MIR 85 230 -32 297 274 20 10 chr20 827954 828056 -71325826 - MIR SINE MIR -98 164 62 21 0 0 0 chr20 828058 828079 -71325803 + GC_rich Low_complexity Low_complexity 1 21 0 324 218 40 142 chr20 828743 828968 -71324914 - L2 LINE L2 -5 3308 3107 235 202 108 0 chr20 829022 829088 -71324794 + MIR SINE MIR 72 144 -64 896 207 5 19 chr20 829197 829405 -71324477 + MER3 DNA MER1_type 5 209 0 365 264 11 0 chr20 830109 830200 -71323682 + MIR SINE MIR 69 160 -102 203 160 13 80 chr20 831122 831197 -71322685 + (CCCCG)n Simple_repeat Simple_repeat 3 72 0 221 200 150 80 chr20 833817 833917 -71319965 - L2 LINE L2 -61 3252 3146 2219 125 0 0 chr20 834827 835124 -71318758 + AluSx SINE Alu 1 297 -15 591 136 0 59 chr20 835154 835272 -71318610 + L1PA10 LINE L1 6058 6168 0 341 268 79 8 chr20 835318 835451 -71318431 - L1MC4 LINE L1 -1 8041 7783 553 258 50 13 chr20 835598 835757 -71318125 - L1ME2 LINE L1 -13 6151 5987 537 152 62 41 chr20 835797 835942 -71317940 - HAL1 LINE L1 -71 2436 2289 375 23 0 0 chr20 835942 835986 -71317896 + (CA)n Simple_repeat Simple_repeat 1 44 0 2224 128 0 0 chr20 835992 836288 -71317594 - AluSx SINE Alu -16 296 1 777 265 50 14 chr20 836328 836547 -71317335 + MIR SINE MIR 18 244 -18 539 228 21 26 chr20 836617 836806 -71317076 - HAL1 LINE L1 -327 2180 1993 267 276 92 20 chr20 836950 837048 -71316834 - L2 LINE L2 -12 3301 3197 712 268 104 0 chr20 837385 837605 -71316277 - MIR SINE MIR -19 243 1 251 276 0 40 chr20 837720 837796 -71316086 - L2 LINE L2 0 3272 3200 195 42 0 0 chr20 837903 837927 -71315955 + (TG)n Simple_repeat Simple_repeat 1 24 0 485 273 166 49 chr20 838047 838457 -71315425 - MLT1H LTR MaLR 0 549 92 2064 108 4 0 chr20 838504 838773 -71315109 - AluSg SINE Alu -40 270 1 257 275 14 0 chr20 838788 838857 -71315025 - MLT1H LTR MaLR -476 73 4 283 305 86 31 chr20 838896 839024 -71314858 + MIR3 SINE MIR 34 168 -40 554 308 106 46 chr20 839058 839425 -71314457 - L2 LINE L2 -11 3261 2873 920 257 94 37 chr20 839501 840020 -71313862 + L2 LINE L2 2763 3313 0 187 229 0 0 chr20 840060 840095 -71313787 + MIR SINE MIR 33 67 -141 217 273 30 0 chr20 840577 840643 -71313239 - MIR SINE MIR -66 142 75 321 47 0 0 chr20 840691 840734 -71313148 + (TG)n Simple_repeat Simple_repeat 1 43 0 299 197 84 14 chr20 840794 840865 -71313017 + MIR SINE MIR 12 87 -175 2178 112 3 0 chr20 840988 841275 -71312607 + AluSg SINE Alu 1 288 -22 290 336 121 27 chr20 841824 842047 -71311835 + L1MC4a LINE L1 5690 5933 -1875 720 179 163 5 chr20 842671 842861 -71311021 - L2 LINE L2 0 3313 3094 1918 238 74 24 chr20 842881 843423 -71310459 - L1ME1 LINE L1 -1 6165 5597 882 249 128 46 chr20 843442 843704 -71310178 - L2 LINE L2 -244 3069 2830 1910 143 28 0 chr20 843704 843990 -71309892 - AluSx SINE Alu -18 294 1 882 249 128 46 chr20 843990 844295 -71309587 - L2 LINE L2 -483 2830 2456 1451 209 27 3 chr20 844304 844605 -71309277 + MLT1E3 LTR MaLR 316 623 -1 385 267 9 0 chr20 844613 844718 -71309164 - MIR3 SINE MIR -6 202 97 394 309 112 0 chr20 845026 845178 -71308704 + MIR SINE MIR 46 214 -48 190 261 54 33 chr20 845209 845301 -71308581 + MIR3 SINE MIR 104 197 -11 606 221 0 8 chr20 845301 845423 -71308459 + MIR SINE MIR 50 170 -92 265 188 206 31 chr20 846310 846407 -71307475 + MIR SINE MIR 4 116 -92 254 325 0 0 chr20 846438 846515 -71307367 - MIR SINE MIR -72 136 60 293 244 35 12 chr20 846706 846792 -71307090 - MIR SINE MIR -76 132 45 641 221 10 72 chr20 846998 847193 -71306689 - MIR SINE MIR -3 259 77 412 310 25 19 chr20 847528 847686 -71306196 + MIR SINE MIR 2 160 -102 623 278 83 81 chr20 847689 848099 -71305783 + MLT1J LTR MaLR 9 419 -92 2676 147 47 81 chr20 848114 848232 -71305650 - L1MC3 LINE L1 0 7785 7665 1752 168 9 32 chr20 848232 848547 -71305335 + AluJo SINE Alu 1 308 -4 2676 147 47 81 chr20 848547 849047 -71304835 - L1MC3 LINE L1 -120 7665 7188 290 247 78 0 chr20 849049 849126 -71304756 - MLT1F1 LTR MaLR -440 127 45 2021 160 0 0 chr20 849367 849660 -71304222 + AluJb SINE Alu 1 293 -19 35 41 0 0 chr20 849665 849714 -71304168 + AT_rich Low_complexity Low_complexity 1 49 0 2529 211 30 13 chr20 849827 850430 -71303452 - MER90 LTR ERV1 -1 613 1 204 125 83 0 chr20 850735 850783 -71303099 - MIR3 SINE MIR -53 155 104 283 211 53 13 chr20 851300 851376 -71302506 + MIR SINE MIR 65 143 -119 280 238 38 0 chr20 851431 851511 -71302371 - MLT1L LTR MaLR 0 615 533 2242 141 0 0 chr20 851698 852010 -71301872 - AluSx SINE Alu 0 312 1 258 257 57 0 chr20 852809 852879 -71301003 - MIR SINE MIR 0 262 189 880 205 118 0 chr20 853014 853243 -71300639 + Charlie4a DNA MER1_type 100 355 -153 426 39 0 0 chr20 853269 853321 -71300561 + (TG)n Simple_repeat Simple_repeat 1 52 0 526 186 0 0 chr20 853321 853407 -71300475 - FLAM_A SINE Alu -30 112 27 2435 62 0 10 chr20 853442 853732 -71300150 - AluY SINE Alu -24 287 1 627 154 15 44 chr20 853733 853869 -71300013 + Charlie4a DNA MER1_type 363 494 -14 411 221 66 41 chr20 853872 853994 -71299888 - MIR SINE MIR -68 194 70 181 300 0 0 chr20 854740 854790 -71299092 + MIR SINE MIR 81 130 -78 2112 142 3 3 chr20 854795 855105 -71298777 - AluSx SINE Alu 0 312 3 913 306 146 3 chr20 855640 856003 -71297879 + MLT1K LTR MaLR 108 522 -66 2191 121 7 0 chr20 856097 856394 -71297488 + AluSx SINE Alu 1 299 -13 554 279 73 45 chr20 856679 856926 -71296956 - MIR SINE MIR -7 255 2 449 252 15 15 chr20 857916 858047 -71295835 - MER103 DNA DNA -12 154 24 201 111 56 0 chr20 859097 859133 -71294749 + G-rich Low_complexity Low_complexity 4 41 0 236 311 13 20 chr20 859321 859472 -71294410 + (TCTCTG)n Simple_repeat Simple_repeat 2 151 0 214 133 0 133 chr20 859617 859700 -71294182 + (TCTCTG)n Simple_repeat Simple_repeat 3 74 0 1870 167 3 23 chr20 860570 860869 -71293013 - AluJb SINE Alu -18 294 2 430 265 124 49 chr20 860916 861101 -71292781 - MIR SINE MIR -44 218 20 599 276 55 55 chr20 861316 861570 -71292312 + MIR SINE MIR 9 262 0 2087 122 3 50 chr20 861698 862019 -71291863 + AluJb SINE Alu 1 306 -6 561 286 93 6 chr20 862361 862543 -71291339 - MIR SINE MIR -14 248 51 1399 142 0 43 chr20 862701 862912 -71290970 + AluJb SINE Alu 87 288 -24 236 305 183 0 chr20 863042 863173 -71290709 + L3 LINE CR1 1419 1573 -4 557 227 188 0 chr20 863280 863456 -71290426 + MIR SINE MIR 48 256 -6 283 369 38 19 chr20 863510 863670 -71290212 - MIR3 SINE MIR -35 173 11 754 240 104 5 chr20 864410 864631 -71289251 + L1ME3 LINE L1 5918 6160 -2 29 70 0 0 chr20 865325 865382 -71288500 + AT_rich Low_complexity Low_complexity 1 57 0 196 216 98 0 chr20 865883 865934 -71287948 + MIR SINE MIR 92 147 -115 389 167 313 0 chr20 865940 866036 -71287846 + MIR SINE MIR 103 228 -34 1787 140 4 11 chr20 866178 866449 -71287433 + AluJo SINE Alu 25 293 -19 769 284 53 25 chr20 866484 866769 -71287113 + MLT1J1 LTR MaLR 153 445 -1 548 271 40 0 chr20 867270 867421 -71286461 - L2 LINE L2 -222 3050 2894 215 342 17 0 chr20 867646 867763 -71286119 - L2 LINE L2 -613 2701 2583 342 185 37 0 chr20 867775 867856 -71286026 - MIR SINE MIR -60 148 65 180 179 0 0 chr20 868637 868676 -71285206 + (CAA)n Simple_repeat Simple_repeat 3 41 0 652 254 42 69 chr20 868867 869084 -71284798 - MIR SINE MIR -32 230 20 532 220 42 8 chr20 870203 870321 -71283561 + L2 LINE L2 3149 3270 -2 250 240 10 94 chr20 870496 870592 -71283290 - MIR3 SINE MIR -30 178 91 237 259 0 12 chr20 870674 870755 -71283127 - MIR SINE MIR -75 133 54 624 294 60 27 chr20 872017 872346 -71281536 + L1MC4a LINE L1 5612 5956 -1852 2080 173 3 0 chr20 872346 872711 -71281171 - MER47A DNA MER2_type 0 366 1 624 294 60 27 chr20 872711 872748 -71281134 + L1MC4a LINE L1 5956 5990 -1818 561 221 8 8 chr20 872758 872880 -71281002 + L2 LINE L2 3192 3313 0 21 36 0 0 chr20 873487 873515 -71280367 + AT_rich Low_complexity Low_complexity 1 28 0 273 125 0 0 chr20 873667 873715 -71280167 + L1MB8 LINE L1 6129 6176 -2 247 64 21 43 chr20 873730 873777 -71280105 + (GGAA)n Simple_repeat Simple_repeat 3 48 0 210 352 9 37 chr20 873862 873970 -71279912 + (CCCCAG)n Simple_repeat Simple_repeat 2 106 0 392 307 6 24 chr20 873980 874146 -71279736 + (CCCTAG)n Simple_repeat Simple_repeat 2 164 0 835 249 194 31 chr20 874457 875110 -71278772 + L2 LINE L2 2378 3178 -135 1756 198 21 0 chr20 875110 875449 -71278433 - MER7A DNA MER2_type 0 346 3 835 249 194 31 chr20 875449 875566 -71278316 + L2 LINE L2 3178 3275 -38 184 233 107 107 chr20 875729 875832 -71278050 + L2 LINE L2 3172 3274 -39 * 201 349 72 46 chr20 875809 876004 -71277878 - L2 LINE L2 -39 3233 3034 698 263 86 74 chr20 876344 876763 -71277119 + L2 LINE L2 2579 2991 -322 643 276 28 37 chr20 876766 876983 -71276899 + L2 LINE L2 3099 3313 0 265 265 36 24 chr20 877136 877219 -71276663 + MIR3 SINE MIR 119 202 -6 576 225 95 12 chr20 877695 877864 -71276018 + MER5A DNA MER1_type 3 185 -4 2107 138 3 0 chr20 878164 878460 -71275422 + AluJb SINE Alu 1 297 -15 680 168 61 0 chr20 878551 878682 -71275200 - FRAM SINE Alu -38 138 1 241 281 245 0 chr20 878747 878943 -71274939 + L2 LINE L2 1940 2183 -1131 967 228 109 16 chr20 878943 879351 -71274531 + Charlie4a DNA MER1_type 1 476 -32 353 294 112 61 chr20 879442 879738 -71274144 + L2 LINE L2 2244 2554 -760 2407 52 28 31 chr20 879841 880168 -71273714 - LTR17 LTR ERV1 -454 326 1 1607 71 5 0 chr20 880170 880381 -71273501 - HERV17 LTR ERV1 -3 8623 8412 220 186 129 43 chr20 880579 880649 -71273233 - MIR3 SINE MIR -47 161 86 243 310 23 0 chr20 881228 881315 -71272567 + MIR SINE MIR 47 135 -127 1422 253 75 10 chr20 881518 881917 -71271965 + L1ME1 LINE L1 5740 6164 -2 738 309 163 3 chr20 882025 882388 -71271494 - L2 LINE L2 -5 3308 2888 351 247 93 16 chr20 882492 882651 -71271231 + MIR SINE MIR 17 185 -62 1605 120 110 6 chr20 882727 883080 -71270802 + LTR7 LTR ERV1 1 450 0 1114 211 14 12 chr20 883080 883488 -71270394 + HERVH LTR ERV1 1 446 -7267 8945 141 10 39 chr20 883575 885102 -71268780 + HERVH LTR ERV1 808 2288 -5425 2435 66 0 20 chr20 885102 885403 -71268479 - AluY SINE Alu -16 295 1 8945 141 10 39 chr20 885403 885482 -71268400 + HERVH LTR ERV1 2288 2368 -5345 2064 119 0 12 chr20 885482 885809 -71268073 + HERVH LTR ERV1 2697 3019 -4694 1220 128 0 0 chr20 885798 885993 -71267889 + HERVH LTR ERV1 4335 4529 -3184 * 3289 88 7 0 chr20 885993 886450 -71267432 + HERVH LTR ERV1 6489 6948 -765 3330 107 5 59 chr20 886504 887076 -71266806 + HERVH LTR ERV1 7173 7713 0 2027 102 47 6 chr20 887076 887450 -71266432 + LTR7 LTR ERV1 1 450 0 1807 179 10 7 chr20 887481 887789 -71266093 + AluJb SINE Alu 1 309 -3 1638 254 37 22 chr20 888146 888634 -71265248 + Charlie4a DNA MER1_type 14 508 0 180 298 0 0 chr20 888668 888715 -71265167 + L2 LINE L2 3145 3191 -81 234 273 83 19 chr20 888744 888863 -71265019 - MIR SINE MIR -69 139 38 683 287 93 20 chr20 889105 889460 -71264422 + L2 LINE L2 2410 2790 -524 297 264 73 27 chr20 889756 889866 -71264016 - MIR3 SINE MIR -32 176 62 525 354 29 26 chr20 890182 890473 -71263409 - L1MC4a LINE L1 -1910 5898 5604 1686 144 0 36 chr20 890473 890750 -71263132 - AluJo SINE Alu -8 304 38 525 354 29 26 chr20 890750 890803 -71263079 - L1MC4a LINE L1 -2204 5604 5553 647 295 118 14 chr20 890945 891233 -71262649 + L2 LINE L2 2996 3313 0 211 283 120 0 chr20 891553 891645 -71262237 - L2 LINE L2 -1 3312 3210 510 276 205 0 chr20 891681 891866 -71262016 - MIR SINE MIR -27 235 13 2037 223 61 21 chr20 891878 892399 -71261483 + MLT1F LTR MaLR 1 542 0 251 185 148 56 chr20 892975 893083 -71260799 + L2 LINE L2 3188 3305 -8 546 229 127 13 chr20 893389 893546 -71260336 - MIR SINE MIR -9 253 79 525 358 63 36 chr20 894104 894551 -71259331 + L2 LINE L2 2812 3270 -2 312 305 29 0 chr20 894761 894866 -71259016 + MIR SINE MIR 33 140 -68 636 256 128 0 chr20 894889 895092 -71258790 + MIR SINE MIR 9 237 -25 320 276 114 0 chr20 895206 895311 -71258571 - MIR SINE MIR -72 190 74 811 316 9 0 chr20 895409 895637 -71258245 - MIR SINE MIR -11 251 22 769 254 94 5 chr20 895954 896167 -71257715 + MIR SINE MIR 19 250 -12 200 250 18 45 chr20 897407 897519 -71256363 + (CAGAGA)n Simple_repeat Simple_repeat 3 111 0 849 194 0 0 chr20 897525 897664 -71256218 + FRAM SINE Alu 7 145 -31 504 156 0 0 chr20 897668 897777 -71256105 + GA-rich Low_complexity Low_complexity 1 109 0 361 267 33 8 chr20 898445 898565 -71255317 + GA-rich Low_complexity Low_complexity 5 127 0 281 210 48 97 chr20 898731 898855 -71255027 + MIR3 SINE MIR 37 154 -54 201 121 0 0 chr20 898976 899009 -71254873 + (ATG)n Simple_repeat Simple_repeat 1 33 0 660 304 113 12 chr20 899948 900274 -71253608 - L2 LINE L2 0 3313 2955 215 297 115 11 chr20 900273 900455 -71253427 - L2 LINE L2 -526 2788 2588 * 860 283 121 42 chr20 900756 901552 -71252330 + L2 LINE L2 2437 3312 -1 255 239 0 0 chr20 902450 902538 -71251344 + (CA)n Simple_repeat Simple_repeat 1 88 0 209 373 32 0 chr20 903031 903157 -71250725 + MIR SINE MIR 16 145 -63 757 209 158 0 chr20 903225 903402 -71250480 + MIR SINE MIR 48 252 -10 682 252 7 0 chr20 904002 904149 -71249733 + MER45A DNA AcHobo 31 178 0 407 332 146 5 chr20 904270 904475 -71249407 + MIR SINE MIR 28 261 -1 1728 196 25 3 chr20 904485 904842 -71249040 + MLT1A1 LTR MaLR 1 365 0 300 111 0 0 chr20 904949 904994 -71248888 + (TTCC)n Simple_repeat Simple_repeat 2 46 0 2127 143 7 0 chr20 904999 905306 -71248576 - AluSx SINE Alu -3 309 1 211 288 157 65 chr20 905306 905459 -71248423 + L2 LINE L2 2687 2853 -461 1016 298 99 47 chr20 906080 906574 -71247308 - MLT1K LTR MaLR -45 543 24 278 144 45 117 chr20 906641 906752 -71247130 - MIR3 SINE MIR -21 187 85 219 149 0 0 chr20 907419 907459 -71246423 + MIR SINE MIR 115 153 -109 1365 262 139 43 chr20 907490 907993 -71245889 - MLT1G1 LTR MaLR -2 593 32 2104 130 0 0 chr20 907993 908327 -71245555 - AluSx SINE Alu 0 334 1 1365 262 139 43 chr20 908327 908361 -71245521 - MLT1G1 LTR MaLR -563 32 3 391 292 25 40 chr20 908983 909185 -71244697 - L1ME4a LINE L1 -1 6120 5922 888 118 0 0 chr20 909281 909408 -71244474 + FLAM_C SINE Alu 2 128 -5 2143 133 3 0 chr20 909445 909745 -71244137 + AluSx SINE Alu 1 301 -11 285 318 76 47 chr20 910070 910598 -71243284 - L1ME4a LINE L1 -202 5919 5379 1053 216 206 64 chr20 910612 911093 -71242789 + MLT1H LTR MaLR 1 549 0 399 275 107 0 chr20 911109 911240 -71242642 + MIR SINE MIR 59 203 -59 1911 145 22 19 chr20 911489 911800 -71242082 + AluSx SINE Alu 1 312 0 2905 195 20 4 chr20 911801 912339 -71241543 - MER41D LTR ERV1 -10 547 1 338 167 33 89 chr20 912342 912432 -71241450 - MER41D-int LTR ERV1 -10 7195 7111 2726 294 29 23 chr20 912572 913346 -71240536 - MER41D-int LTR ERV1 -260 7496 6714 5112 98 17 22 chr20 913346 914129 -71239753 - MER4E LTR ERV1 0 779 1 2726 294 29 23 chr20 914129 914278 -71239604 - MER41D-int LTR ERV1 -1042 6714 6567 971 283 16 35 chr20 914394 914761 -71239121 - MER41D-int LTR ERV1 -1401 6355 5996 607 124 72 0 chr20 914765 914862 -71239020 - MER49 LTR ERV1 -204 719 616 * 1048 190 27 81 chr20 914855 915150 -71238732 - MER49 LTR ERV1 -642 281 3 * 1584 156 36 22 chr20 915150 915523 -71238359 - MER41D-int LTR ERV1 -35 6723 6363 507 179 219 0 chr20 915512 915635 -71238247 - MER41D-int LTR ERV1 -625 6133 5984 * 735 159 0 138 chr20 915841 915955 -71237927 - MER41D-int LTR ERV1 -4167 3953 3875 1978 162 0 14 chr20 915955 916252 -71237630 - AluSx SINE Alu -18 294 2 735 159 0 138 chr20 916252 916332 -71237550 - MER41D-int LTR ERV1 -4245 3875 3786 2656 155 51 88 chr20 916514 917784 -71236098 - MER41D-int LTR ERV1 -2148 4183 1720 800 162 8 1 chr20 918282 918424 -71235458 - MER41D-int LTR ERV1 -3015 3661 1506 378 125 0 16 chr20 918414 918478 -71235404 - MER41D-int LTR ERV1 -568 1218 1156 * 25 65 0 0 chr20 918478 918524 -71235358 + AT_rich Low_complexity Low_complexity 1 46 0 2002 166 0 3 chr20 918528 918841 -71235041 + AluJo SINE Alu 1 312 0 1173 169 4 30 chr20 918851 919087 -71234795 - LTR57-int LTR ERVL -4658 685 456 313 176 67 28 chr20 919446 919547 -71234335 - MER41D-int LTR ERV1 -5851 95 1 2855 197 16 2 chr20 919547 920096 -71233786 - MER41D LTR ERV1 0 557 1 293 236 16 110 chr20 920740 920867 -71233015 + MIR SINE MIR 112 226 -36 184 323 0 15 chr20 920999 921064 -71232818 - MIR SINE MIR -63 145 82 451 286 82 15 chr20 921212 921418 -71232464 + MIR SINE MIR 28 247 -15 921 280 89 32 chr20 921672 921921 -71231961 + L2 LINE L2 2922 3200 -113 1745 193 22 16 chr20 921921 921991 -71231891 - MLT1A1 LTR MaLR 0 365 297 1968 123 41 10 chr20 921991 922284 -71231598 + AluSx SINE Alu 1 302 -10 1745 193 22 16 chr20 922284 922576 -71231306 - MLT1A1 LTR MaLR -68 297 1 921 280 89 32 chr20 922576 922697 -71231185 + L2 LINE L2 3200 3313 0 270 237 0 0 chr20 922718 922777 -71231105 - L2 LINE L2 -14 3258 3200 595 165 0 0 chr20 922875 922984 -71230898 + MSTA LTR MaLR 1 109 -319 364 227 114 8 chr20 922992 923124 -71230758 + L1M4 LINE L1 3804 3949 -2197 4980 58 0 0 chr20 923124 923762 -71230120 - L1PA7 LINE L1 -4 6150 5513 1941 148 34 0 chr20 923762 924086 -71229796 + MSTA LTR MaLR 94 428 0 362 298 69 23 chr20 924214 924345 -71229537 - MIR3 SINE MIR -63 145 9 313 242 88 0 chr20 924449 924540 -71229342 - MLT1K LTR MaLR -81 507 409 544 270 130 36 chr20 924709 925084 -71228798 + MLT1J LTR MaLR 59 511 0 226 269 39 39 chr20 925547 925651 -71228231 + MIR SINE MIR 24 127 -135 379 283 41 62 chr20 925847 926154 -71227728 + MLT1J2 LTR MaLR 31 408 -38 274 303 42 49 chr20 926436 926578 -71227304 - MIR SINE MIR -8 254 114 876 260 70 57 chr20 926666 927123 -71226759 - L2 LINE L2 -31 3282 2820 204 200 0 0 chr20 927299 927344 -71226538 + CT-rich Low_complexity Low_complexity 1 45 0 1037 240 80 96 chr20 927473 927681 -71226201 - MER41C LTR ERV1 -9 545 335 1946 135 17 3 chr20 927681 927969 -71225913 + AluJb SINE Alu 14 305 -7 1037 240 80 96 chr20 927969 928098 -71225784 - MER41C LTR ERV1 -219 335 205 2279 94 0 7 chr20 928098 928417 -71225465 - AluY SINE Alu 0 311 1 1037 240 80 96 chr20 928417 928629 -71225253 - MER41C LTR ERV1 -349 205 4 290 274 77 0 chr20 928632 928749 -71225133 + MIR3 SINE MIR 33 158 -50 * 479 264 74 0 chr20 928745 928866 -71225016 + MIR SINE MIR 61 190 -72 1428 145 137 24 chr20 928973 929228 -71224654 + AluJb SINE Alu 1 284 -28 4970 117 50 25 chr20 929228 929880 -71224002 - MER4D LTR ERV1 -38 865 186 2001 101 59 7 chr20 929880 930168 -71223714 - AluSx SINE Alu -9 303 1 4970 117 50 25 chr20 930168 930359 -71223523 - MER4D LTR ERV1 -717 186 1 427 273 97 3 chr20 931174 931354 -71222528 + MIR SINE MIR 11 249 -13 381 384 69 16 chr20 931707 932085 -71221797 - L1MC4a LINE L1 -1901 5907 5510 629 328 64 0 chr20 932317 932552 -71221330 + MIR SINE MIR 13 262 0 215 223 38 2 chr20 933073 933134 -71220748 + MIR SINE MIR 85 141 -67 343 333 8 25 chr20 933441 933561 -71220321 - L1MC4a LINE L1 -1878 5930 5813 869 138 31 25 chr20 933724 933884 -71219998 - THE1C LTR MaLR -45 330 170 338 256 124 16 chr20 933884 934013 -71219869 - L1MC4a LINE L1 -2043 5765 5623 1912 216 77 17 chr20 934018 934762 -71219120 + L1MC/D LINE L1 4930 5740 -743 1816 162 17 45 chr20 934765 935123 -71218759 - THE1C LTR MaLR 0 375 28 709 128 17 0 chr20 935123 935240 -71218642 + AluSc SINE Alu 178 296 -13 765 238 31 9 chr20 935243 935470 -71218412 - L2 LINE L2 -144 3169 2938 190 169 67 112 chr20 936044 936133 -71217749 + MIR SINE MIR 59 143 -65 369 316 117 23 chr20 936134 936400 -71217482 + L1ME LINE L1 5370 5660 -510 2142 141 3 0 chr20 936542 936912 -71216970 + AluSx SINE Alu 5 375 0 2461 99 0 0 chr20 936987 937299 -71216583 - AluSx SINE Alu 0 312 1 227 364 0 0 chr20 937579 937678 -71216204 + MIR SINE MIR 139 237 -25 322 333 72 9 chr20 938094 938317 -71215565 - MIR SINE MIR -15 247 5 654 312 48 82 chr20 938769 939178 -71214704 - L1MC4a LINE L1 -1748 6060 5682 2304 77 0 7 chr20 939178 939485 -71214397 - AluY SINE Alu 0 305 1 654 312 48 82 chr20 939485 939766 -71214116 - L1MC4a LINE L1 -2126 5682 5393 532 244 19 19 chr20 939962 940118 -71213764 + MIR SINE MIR 101 256 -6 517 200 86 100 chr20 940139 940265 -71213617 - MIR SINE MIR -1 261 138 2585 43 13 3 chr20 940265 940569 -71213313 + AluY SINE Alu 1 307 -4 517 200 86 100 chr20 940569 940652 -71213230 - MIR SINE MIR -124 138 55 588 223 104 75 chr20 940727 940982 -71212900 - MLT1G LTR MaLR -2 588 286 350 233 0 0 chr20 941378 941451 -71212431 + L2 LINE L2 3241 3313 0 185 328 31 0 chr20 941628 941692 -71212190 + MIR SINE MIR 186 251 -11 1733 209 0 0 chr20 941800 942111 -71211771 + AluJo SINE Alu 1 311 -1 313 198 22 77 chr20 943118 943209 -71210673 + L1MCa LINE L1 1979 2064 -4362 2161 129 10 3 chr20 943213 943515 -71210367 + AluJo SINE Alu 1 304 -8 183 80 0 0 chr20 943518 943543 -71210339 + (CA)n Simple_repeat Simple_repeat 2 26 0 297 253 21 32 chr20 943691 943786 -71210096 - MER5A DNA MER1_type -69 120 27 308 282 23 46 chr20 943824 943955 -71209927 - MIR SINE MIR -59 149 22 431 217 12 42 chr20 944917 945083 -71208799 + G-rich Low_complexity Low_complexity 5 165 0 184 149 85 0 chr20 945218 945265 -71208617 + MIR SINE MIR 82 132 -76 292 234 8 23 chr20 945866 945999 -71207883 + GA-rich Low_complexity Low_complexity 1 130 0 252 271 24 0 chr20 946015 946100 -71207782 + GA-rich Low_complexity Low_complexity 1 87 0 215 133 22 0 chr20 946115 946160 -71207722 + GA-rich Low_complexity Low_complexity 2 47 0 252 306 102 10 chr20 946754 946852 -71207030 - MIR SINE MIR 0 262 156 312 229 0 0 chr20 947613 947696 -71206186 + (CCCA)n Simple_repeat Simple_repeat 4 86 0 581 228 6 0 chr20 947709 947871 -71206011 + (CCCA)n Simple_repeat Simple_repeat 4 166 0 644 274 110 48 chr20 947888 948242 -71205640 - L2 LINE L2 0 3313 2938 182 273 0 0 chr20 948556 948600 -71205282 + MIR SINE MIR 47 90 -172 748 263 0 22 chr20 948669 948848 -71205034 + MIR SINE MIR 52 226 -36 434 328 149 13 chr20 948934 949309 -71204573 + MER20B DNA MER1_type 27 452 -331 605 254 12 12 chr20 949391 949564 -71204318 + MER20B DNA MER1_type 611 783 0 198 0 0 0 chr20 949988 950010 -71203872 + (CAGA)n Simple_repeat Simple_repeat 2 23 0 221 317 156 10 chr20 950201 950406 -71203476 - L2 LINE L2 -221 3051 2817 382 311 0 0 chr20 950522 950612 -71203270 - L1MC4 LINE L1 -1339 6703 6614 321 242 0 0 chr20 950644 950706 -71203176 - L1MC4 LINE L1 -1339 6703 6642 191 256 122 0 chr20 950739 950821 -71203061 - MIR SINE MIR -94 168 77 350 336 0 16 chr20 950878 951003 -71202879 - L2 LINE L2 0 3313 3191 656 270 20 15 chr20 951577 951781 -71202101 + L2 LINE L2 3109 3313 0 731 264 8 72 chr20 952181 952431 -71201451 - MIR SINE MIR -7 255 22 1675 158 44 11 chr20 952431 952746 -71201136 + AluJo SINE Alu 1 324 0 187 328 16 0 chr20 953368 953432 -71200450 - MIR SINE MIR -86 122 58 1931 244 16 5 chr20 954082 954508 -71199374 + MLT1J LTR MaLR 74 504 -7 1938 167 20 0 chr20 954884 955184 -71198698 + AluJo SINE Alu 1 306 -6 215 208 0 21 chr20 956096 956144 -71197738 + CT-rich Low_complexity Low_complexity 4 50 0 1827 160 10 10 chr20 956686 956992 -71196890 - AluJo SINE Alu -6 306 1 896 209 68 0 chr20 957042 957219 -71196663 - MER5A DNA MER1_type 0 189 1 437 255 47 63 chr20 957220 957518 -71196364 + L1ME3 LINE L1 5650 5948 -214 21 0 0 0 chr20 957612 957633 -71196249 + AT_rich Low_complexity Low_complexity 1 21 0 470 256 70 58 chr20 957870 957916 -71195966 + MLT1J LTR MaLR 19 63 -448 2061 133 0 3 chr20 957916 958216 -71195666 - AluJb SINE Alu -13 299 1 470 256 70 58 chr20 958216 958341 -71195541 + MLT1J LTR MaLR 63 192 -319 298 225 62 12 chr20 958857 958937 -71194945 - MIR SINE MIR -63 145 62 294 283 71 10 chr20 959152 959251 -71194631 - MIR3 SINE MIR -28 180 76 1653 99 5 14 chr20 959290 959561 -71194321 - AluSg/x SINE Alu 0 334 66 564 269 78 42 chr20 960387 960776 -71193106 + MLT1K LTR MaLR 150 588 0 233 192 77 0 chr20 961555 961607 -71192275 - L2 LINE L2 -3 3269 3214 578 244 75 12 chr20 961632 961792 -71192090 + MIR SINE MIR 79 248 -14 270 298 230 12 chr20 961878 962039 -71191843 + MIR SINE MIR 47 242 -20 576 253 101 17 chr20 962676 962854 -71191028 + Charlie8 DNA MER1_type 84 276 -2141 1084 144 11 11 chr20 962967 963155 -71190727 - MER5A DNA MER1_type 0 189 2 594 245 14 14 chr20 963173 963320 -71190562 + MIR SINE MIR 36 182 -80 668 296 5 23 chr20 964027 964247 -71189635 + MIR SINE MIR 41 256 -6 574 274 121 18 chr20 964805 965028 -71188854 + L2 LINE L2 2341 2586 -728 444 308 100 23 chr20 965031 965203 -71188679 + L2 LINE L2 2842 2999 -314 1410 281 7 26 chr20 965203 965655 -71188227 + LTR47B LTR ERVL 1 443 0 444 308 100 23 chr20 965655 965833 -71188049 + L2 LINE L2 2999 3219 -94 509 243 62 8 chr20 965946 966100 -71187782 - MIR SINE MIR -79 129 4 251 224 30 69 chr20 966585 966704 -71187178 - MER5A DNA MER1_type 0 189 63 213 273 0 18 chr20 966891 966946 -71186936 - MIR SINE MIR -99 163 110 2125 120 3 0 chr20 967093 967385 -71186497 + AluSx SINE Alu 1 293 -19 212 0 0 35 chr20 967388 967417 -71186465 + (TAAAA)n Simple_repeat Simple_repeat 5 32 0 232 239 0 0 chr20 968394 968440 -71185442 + L2 LINE L2 3261 3306 -7 240 313 24 12 chr20 969023 969106 -71184776 + MIR SINE MIR 23 106 -102 232 197 167 15 chr20 969477 969543 -71184339 + MIR SINE MIR 105 180 -82 549 232 96 0 chr20 969664 969789 -71184093 - MIR SINE MIR -85 177 41 2194 115 0 10 chr20 969906 970202 -71183680 + AluSg SINE Alu 1 293 -17 387 250 22 0 chr20 970592 970684 -71183198 + MIR3 SINE MIR 82 175 -33 1081 144 7 7 chr20 970693 971200 -71182682 + (TCCA)n Simple_repeat Simple_repeat 1 685 0 241 234 0 0 chr20 971200 971247 -71182635 - L2 LINE L2 0 3313 3267 273 278 0 56 chr20 971351 971441 -71182441 + L2 LINE L2 3188 3272 0 306 281 25 46 chr20 972604 972800 -71181082 + L1M3 LINE L1 5258 5449 -731 258 327 30 0 chr20 972898 972999 -71180883 - MIR SINE MIR -65 143 40 250 236 236 11 chr20 973257 973346 -71180536 + MIR SINE MIR 32 140 -122 1990 151 0 16 chr20 973356 973661 -71180221 + AluJo SINE Alu 3 302 -10 709 257 229 12 chr20 973690 974320 -71179562 - L2 LINE L2 -2 3270 2497 189 244 183 37 chr20 974310 974392 -71179490 + MIR SINE MIR 163 256 -6 * 2271 123 0 0 chr20 974393 974701 -71179181 - AluSx SINE Alu -4 308 1 470 282 93 39 chr20 975077 975294 -71178588 + MIR SINE MIR 16 243 -19 182 273 23 0 chr20 975322 975366 -71178516 + L2 LINE L2 3250 3294 -19 206 280 0 0 chr20 975571 975621 -71178261 + MIR SINE MIR 114 163 -99 418 297 30 13 chr20 975771 975974 -71177908 - MIR SINE MIR -19 243 38 555 165 31 0 chr20 976282 976409 -71177473 + CT-rich Low_complexity Low_complexity 2 132 0 219 129 0 0 chr20 976413 976444 -71177438 + (TC)n Simple_repeat Simple_repeat 2 32 0 732 203 0 0 chr20 976957 977090 -71176792 - FLAM_A SINE Alu 0 133 1 463 300 150 40 chr20 977338 977791 -71176091 + L1M2 LINE L1 1737 4247 -2601 365 0 0 0 chr20 978114 978165 -71175717 - AluSp/q SINE Alu 0 303 253 229 229 16 16 chr20 978176 978237 -71175645 - MIR SINE MIR -122 140 80 366 280 134 25 chr20 978428 978585 -71175297 - MIR SINE MIR -42 220 47 421 217 0 0 chr20 978692 978775 -71175107 - MIR SINE MIR -117 145 63 343 277 21 43 chr20 979325 979466 -71174416 + MIR SINE MIR 47 184 -78 245 209 23 105 chr20 979482 979568 -71174314 + MIR SINE MIR 7 85 -177 346 171 29 0 chr20 979569 979639 -71174243 + MER116 DNA Mariner 4 75 -5 355 173 62 12 chr20 979647 979728 -71174154 + MIR SINE MIR 108 192 -70 722 238 132 5 chr20 979748 979937 -71173945 + MIR SINE MIR 13 225 -37 2183 118 0 24 chr20 980417 980714 -71173168 - AluSx SINE Alu -22 290 1 218 293 94 12 chr20 980887 981016 -71172866 + MIR3 SINE MIR 56 202 -6 275 369 15 0 chr20 981174 981304 -71172578 + MIR SINE MIR 60 191 -71 251 343 157 0 chr20 981484 981618 -71172264 + MIR SINE MIR 28 182 -80 231 323 0 0 chr20 981723 981785 -71172097 + (CA)n Simple_repeat Simple_repeat 2 63 0 258 143 77 55 chr20 981787 981878 -71172004 + MER112 DNA MER1_type 60 152 -108 448 228 43 0 chr20 981945 982037 -71171845 + MER58C DNA MER1_type 118 213 -2 356 102 0 17 chr20 982057 982116 -71171766 + (CATTC)n Simple_repeat Simple_repeat 2 59 0 272 220 34 0 chr20 982395 982454 -71171428 - MER58 DNA MER1_type -25 2395 130 236 309 0 15 chr20 982519 982587 -71171295 + L2 LINE L2 3235 3301 -12 379 262 82 33 chr20 982858 982980 -71170902 + MIR SINE MIR 24 151 -111 180 188 0 0 chr20 983244 983276 -71170606 - L2 LINE L2 -19 3294 3263 247 328 35 34 chr20 983604 983782 -71170100 - MIR3 SINE MIR -64 144 12 347 316 85 24 chr20 983813 984031 -71169851 - MIR SINE MIR -15 247 13 231 287 66 33 chr20 984543 984665 -71169217 + L2 LINE L2 3146 3271 -1 1915 116 3 89 chr20 984836 985163 -71168719 - AluJb SINE Alu -11 301 3 267 147 191 0 chr20 985194 985262 -71168620 - MER103 DNA DNA -85 81 1 277 196 22 141 chr20 985676 985717 -71168165 - MIR3 SINE MIR -24 184 157 2223 107 0 0 chr20 985717 986019 -71167863 - AluSx SINE Alu 0 302 1 277 196 22 141 chr20 986019 986068 -71167814 - MIR3 SINE MIR -51 157 104 504 236 19 9 chr20 986104 986210 -71167672 + MIR SINE MIR 39 145 -63 578 283 16 2 chr20 986417 986582 -71167300 - MIR SINE MIR -21 187 12 236 320 75 34 chr20 986908 987055 -71166827 + MIR SINE MIR 76 228 -34 22 35 0 0 chr20 988076 988105 -71165777 + GC_rich Low_complexity Low_complexity 1 29 0 23 0 0 0 chr20 988207 988230 -71165652 + GC_rich Low_complexity Low_complexity 1 23 0 22 56 0 0 chr20 988240 988276 -71165606 + GC_rich Low_complexity Low_complexity 1 36 0 534 279 78 22 chr20 989075 989254 -71164628 - MIR SINE MIR -5 257 69 2463 96 0 3 chr20 989382 989695 -71164187 - AluSx SINE Alu 0 312 1 273 385 7 7 chr20 989907 990050 -71163832 - MIR3 SINE MIR -23 185 43 482 292 172 43 chr20 990057 990486 -71163396 + L2 LINE L2 2781 3272 0 441 274 280 26 chr20 990684 991110 -71162772 + L2 LINE L2 2787 3313 0 203 355 36 36 chr20 991124 991262 -71162620 + MIR3 SINE MIR 71 208 0 658 138 24 67 chr20 991641 991790 -71162092 - MLT1J2 LTR MaLR -311 139 14 214 256 198 0 chr20 991806 991892 -71161990 + L2 LINE L2 2589 2691 -623 278 157 20 0 chr20 991978 992029 -71161853 + MER81 DNA DNA 1 52 -62 4397 223 49 36 chr20 992054 992214 -71161668 - L1MD1 LINE L1 -122 6120 5964 1960 136 25 0 chr20 992214 992500 -71161382 - AluJb SINE Alu -19 293 1 4397 223 49 36 chr20 992500 994308 -71159574 - L1MD1 LINE L1 -278 5964 3639 1162 204 225 43 chr20 994287 994357 -71159525 + L1MDb LINE L1 732 788 -5621 * 2325 108 3 3 chr20 994357 994662 -71159220 + AluSx SINE Alu 1 305 -7 1162 204 225 43 chr20 994662 995031 -71158851 + L1MDb LINE L1 788 1251 -5158 713 228 35 93 chr20 995038 995328 -71158554 + LTR16C LTR ERVL 218 490 -1 1026 209 48 4 chr20 996003 996233 -71157649 + MIR SINE MIR 23 262 0 376 235 96 0 chr20 996425 996540 -71157342 - MIR3 SINE MIR -24 184 59 298 301 98 21 chr20 997646 997789 -71156093 + MIR SINE MIR 103 256 -6 982 254 98 0 chr20 997836 998072 -71155810 + MIR SINE MIR 4 262 0 743 280 177 24 chr20 998341 998759 -71155123 - L2 LINE L2 0 3313 2832 322 192 36 34 chr20 999103 999242 -71154640 - MIR SINE MIR -63 145 3 498 239 155 0 chr20 999591 999746 -71154136 + LTR16C LTR ERVL 149 327 -164 743 252 98 28 chr20 1000117 1000403 -71153479 + L2 LINE L2 2867 3172 -141 1705 126 0 8 chr20 1000654 1000936 -71152946 + AluSq SINE Alu 47 326 0 478 270 44 19 chr20 1001064 1001223 -71152659 - MLT1J LTR MaLR -348 163 1 220 244 0 0 chr20 1001740 1001797 -71152085 + MIR SINE MIR 97 143 -65 2195 144 0 0 chr20 1002100 1002413 -71151469 - AluSq SINE Alu 0 313 1 297 289 118 0 chr20 1002417 1002552 -71151330 + L2 LINE L2 2231 2381 -933 201 206 0 82 chr20 1002602 1002675 -71151207 + C-rich Low_complexity Low_complexity 3 69 0 658 209 58 62 chr20 1002820 1003045 -71150837 + LTR16C LTR ERVL 160 383 -108 383 267 17 17 chr20 1003210 1003326 -71150556 + L2 LINE L2 2934 3049 -223 249 227 83 83 chr20 1003414 1003546 -71150336 - L2 LINE L2 -1 3271 3140 656 224 75 0 chr20 1003681 1003842 -71150040 + MER58A DNA MER1_type 34 206 -18 603 133 11 51 chr20 1003854 1003990 -71149892 - MLT1F LTR MaLR -46 547 389 286 167 0 0 chr20 1003965 1004013 -71149869 - MLT1F LTR MaLR -293 249 202 * 570 298 81 10 chr20 1004029 1004227 -71149655 - MIR SINE MIR -48 214 3 243 282 51 54 chr20 1004744 1004879 -71149003 + MIR SINE MIR 20 154 -54 356 279 81 22 chr20 1005099 1005235 -71148647 - MIR SINE MIR -71 191 48 196 200 31 0 chr20 1005291 1005356 -71148526 + (TCCA)n Simple_repeat Simple_repeat 1 67 0 224 266 9 0 chr20 1005394 1005503 -71148379 + (TCCA)n Simple_repeat Simple_repeat 3 112 0 383 230 28 0 chr20 1005555 1005812 -71148070 + (TCCA)n Simple_repeat Simple_repeat 1 264 0 1013 280 134 27 chr20 1005818 1006307 -71147575 - L2 LINE L2 -3 3310 2755 340 251 102 58 chr20 1006540 1006735 -71147147 - MIR SINE MIR -49 213 13 228 340 87 13 chr20 1006818 1006968 -71146914 - MIR3 SINE MIR -20 188 28 528 263 40 17 chr20 1007521 1007722 -71146160 + MIR SINE MIR 41 252 -10 288 279 141 66 chr20 1008450 1008755 -71145127 + MLT1K LTR MaLR 261 588 0 327 362 14 14 chr20 1008801 1008942 -71144940 + MIR3 SINE MIR 5 145 -63 438 267 20 62 chr20 1009325 1009354 -71144528 + L1MC4a LINE L1 5178 5207 -939 1799 166 82 0 chr20 1009354 1009685 -71144197 - MER46B DNA MER2_type 0 236 4 438 267 20 62 chr20 1009685 1009850 -71144032 + L1MC4a LINE L1 5207 5364 -782 230 232 12 73 chr20 1009851 1009933 -71143949 + L1MC4a LINE L1 5456 5532 -589 551 305 30 30 chr20 1009934 1010134 -71143748 + L2 LINE L2 3114 3313 0 431 308 91 18 chr20 1010185 1010526 -71143356 + L1MC4a LINE L1 5564 5929 -1879 2111 105 4 4 chr20 1010539 1010867 -71143015 + AluSg SINE Alu 3 330 0 198 103 0 0 chr20 1010893 1010922 -71142960 + (TCCA)n Simple_repeat Simple_repeat 1 29 0 586 279 78 7 chr20 1011061 1011344 -71142538 - L1ME3A LINE L1 -12 6158 5856 1881 191 71 28 chr20 1011410 1011903 -71141979 - L1MC4 LINE L1 -285 7757 7244 6477 77 44 3 chr20 1011925 1012405 -71141477 - L1PA13 LINE L1 -11 6152 5693 2285 130 0 0 chr20 1012405 1012713 -71141169 - AluSx SINE Alu -4 308 1 6477 77 44 3 chr20 1012713 1013340 -71140542 - L1PA13 LINE L1 -470 5693 5024 451 280 25 65 chr20 1015193 1015393 -71138489 + MIR SINE MIR 48 239 -23 323 332 151 11 chr20 1015497 1015762 -71138120 + L2 LINE L2 2955 3256 -16 400 211 189 11 chr20 1015958 1016053 -71137829 - MER81 DNA DNA -2 112 1 227 295 21 53 chr20 1016149 1016186 -71137696 + LTR67 LTR ERVL 81 169 -385 328 146 0 0 chr20 1016186 1016241 -71137641 + MLT1J2 LTR MaLR 72 126 -324 * 739 238 155 0 chr20 1016208 1016460 -71137422 + MLT1L LTR MaLR 196 486 -129 2233 197 65 121 chr20 1016468 1016752 -71137130 + L1ME3 LINE L1 5142 5441 -721 2256 107 3 0 chr20 1016752 1017043 -71136839 + AluSp SINE Alu 3 294 -19 2233 197 65 121 chr20 1017043 1017829 -71136053 + L1ME3 LINE L1 5441 6160 -2 408 320 20 70 chr20 1018008 1018127 -71135755 - MIR SINE MIR -65 197 90 2073 111 10 0 chr20 1018127 1018425 -71135457 - AluSx SINE Alu -11 301 1 408 320 20 70 chr20 1018425 1018505 -71135377 - MIR SINE MIR -172 90 8 255 213 150 0 chr20 1018703 1018783 -71135099 + Charlie7 DNA MER1_type 14 105 -2507 * 262 216 32 48 chr20 1018776 1018901 -71134981 + Charlie7 DNA MER1_type 2440 2562 -50 800 203 6 0 chr20 1018994 1019152 -71134730 - FRAM SINE Alu -12 164 6 595 173 0 38 chr20 1019193 1019326 -71134556 + L1MA4 LINE L1 6173 6300 0 229 250 91 91 chr20 1019365 1019585 -71134297 - HAL1 LINE L1 -473 2034 1815 514 271 121 53 chr20 1019669 1020098 -71133784 + MLT1H LTR MaLR 35 539 -10 284 135 19 0 chr20 1020103 1020155 -71133727 - HAL1 LINE L1 -762 1745 1693 1593 246 127 14 chr20 1020162 1020651 -71133231 + MLT1H1 LTR MaLR 10 552 -3 381 222 174 107 chr20 1020746 1021223 -71132659 - HAL1 LINE L1 -1425 1082 574 312 344 99 18 chr20 1021230 1021451 -71132431 - HAL1 LINE L1 -2001 506 268 460 283 213 22 chr20 1022038 1022310 -71131572 + L2 LINE L2 2990 3313 0 528 254 148 0 chr20 1023480 1023649 -71130233 - MIR SINE MIR 0 262 69 438 256 17 26 chr20 1023699 1023816 -71130066 + L2 LINE L2 3197 3312 -1 633 203 105 7 chr20 1024411 1024564 -71129318 - MIR SINE MIR -10 252 85 274 244 146 12 chr20 1024811 1024893 -71128989 - MIR3 SINE MIR -10 198 106 235 247 173 80 chr20 1025346 1025508 -71128374 + L3 LINE CR1 996 1172 -405 1804 140 56 0 chr20 1025682 1025968 -71127914 + AluSx SINE Alu 1 302 -10 715 283 123 49 chr20 1025969 1026456 -71127426 + Charlie1b DNA MER1_type 1 523 0 249 380 10 0 chr20 1026456 1026556 -71127326 + L3 LINE CR1 1366 1466 -111 984 320 78 12 chr20 1026645 1027205 -71126677 + L2 LINE L2 2714 3312 -1 201 121 0 0 chr20 1027215 1027248 -71126634 + (TGAA)n Simple_repeat Simple_repeat 4 36 0 407 283 108 0 chr20 1027959 1028079 -71125803 + L2 LINE L2 3180 3312 -1 649 239 78 58 chr20 1028093 1028298 -71125584 - MIR SINE MIR -50 212 4 370 245 129 52 chr20 1028307 1028462 -71125420 + MIR SINE MIR 70 236 -26 365 283 51 0 chr20 1028779 1028918 -71124964 - MIR SINE MIR -55 153 5 903 283 100 6 chr20 1029116 1029466 -71124416 - LTR16A LTR ERVL -8 442 60 404 239 127 14 chr20 1029613 1029755 -71124127 - MIR SINE MIR -62 200 43 231 309 84 46 chr20 1029829 1030091 -71123791 - L2 LINE L2 -86 3186 2915 425 254 179 17 chr20 1031162 1031335 -71122547 - MLT1K LTR MaLR -12 576 376 307 226 98 53 chr20 1031552 1031685 -71122197 - MIR SINE MIR -93 169 31 282 283 0 0 chr20 1031824 1031983 -71121899 + (TGGA)n Simple_repeat Simple_repeat 4 162 0 188 289 105 53 chr20 1032438 1032590 -71121292 - MIR3 SINE MIR -21 187 28 730 262 109 23 chr20 1032767 1033023 -71120859 - L2 LINE L2 -8 3305 3028 1066 226 131 27 chr20 1033039 1033397 -71120485 + MLT1J2 LTR MaLR 16 381 -69 737 291 216 12 chr20 1033432 1033844 -71120038 - L2 LINE L2 -343 2971 2476 1468 245 134 31 chr20 1034514 1035053 -71118829 + MLT1G1 LTR MaLR 1 594 -1 293 292 50 50 chr20 1035467 1035587 -71118295 - L2 LINE L2 -1 3312 3193 635 278 87 57 chr20 1035587 1035736 -71118146 + L2 LINE L2 2920 3063 -250 1893 145 10 3 chr20 1035736 1036039 -71117843 - AluSx SINE Alu -7 305 1 635 278 87 57 chr20 1036039 1036256 -71117626 + L2 LINE L2 3063 3297 -16 776 235 107 21 chr20 1036764 1036998 -71116884 + MIR SINE MIR 4 257 -5 892 186 27 27 chr20 1037102 1037285 -71116597 + L2 LINE L2 3127 3309 -4 26 30 0 0 chr20 1037819 1037852 -71116030 + AT_rich Low_complexity Low_complexity 1 33 0 544 289 57 0 chr20 1038193 1038352 -71115530 + MIR SINE MIR 20 187 -75 189 260 40 0 chr20 1038369 1038419 -71115463 - L2 LINE L2 -11 3261 3210 375 290 99 0 chr20 1039145 1039276 -71114606 - MIR SINE MIR -23 239 96 210 269 170 35 chr20 1039471 1039642 -71114240 + MIR SINE MIR 39 232 -30 1624 134 6 113 chr20 1039642 1039977 -71113905 + AluSx SINE Alu 2 300 -2 374 240 33 16 chr20 1040101 1040222 -71113660 + L1ME4a LINE L1 5960 6082 -39 1939 122 3 3 chr20 1040496 1040783 -71113099 - AluSx SINE Alu -25 287 1 285 246 52 44 chr20 1040854 1040976 -71112906 + MER5A DNA MER1_type 9 141 -48 196 313 0 45 chr20 1041012 1041079 -71112803 - MIR3 SINE MIR -43 165 102 217 284 25 12 chr20 1041417 1041498 -71112384 + MIR SINE MIR 111 192 -70 274 347 113 16 chr20 1041708 1041956 -71111926 + L2 LINE L2 2636 2907 -407 1643 170 87 32 chr20 1042774 1043144 -71110738 + MLT1B LTR MaLR 1 390 0 705 214 49 86 chr20 1043170 1043413 -71110469 - MER106A DNA MER1_type 0 236 3 470 281 87 56 chr20 1043438 1043656 -71110226 + MLT1L LTR MaLR 200 470 -145 1940 117 14 0 chr20 1043656 1043938 -71109944 - AluSq SINE Alu -27 286 1 470 281 87 56 chr20 1043938 1044085 -71109797 + MLT1L LTR MaLR 470 611 -4 453 275 155 40 chr20 1044091 1044342 -71109540 - MLT1K LTR MaLR -302 286 7 289 286 109 54 chr20 1044547 1044694 -71109188 - L2 LINE L2 0 3272 3118 764 299 48 81 chr20 1045104 1045295 -71108587 - LTR16A LTR ERVL 0 450 277 748 97 0 18 chr20 1045295 1045409 -71108473 + L1MA2 LINE L1 6193 6304 0 764 299 48 81 chr20 1045409 1045611 -71108271 - LTR16A LTR ERVL -173 277 70 325 299 37 0 chr20 1045938 1046045 -71107837 - MIR SINE MIR -3 259 149 579 232 222 40 chr20 1046820 1047162 -71106720 - MLT1H LTR MaLR -25 384 30 240 250 0 0 chr20 1047336 1047384 -71106498 + L2 LINE L2 2995 3042 -271 278 326 33 0 chr20 1047473 1047565 -71106317 + MIR SINE MIR 60 154 -108 454 189 189 8 chr20 1047573 1047705 -71106177 - MLT1L LTR MaLR -2 613 458 436 20 0 0 chr20 1047758 1047809 -71106073 + MADE1 DNA Mariner 2 52 -28 557 57 0 0 chr20 1047812 1047882 -71106000 + MADE1 DNA Mariner 7 76 -4 270 77 0 96 chr20 1047862 1047914 -71105968 + MADE1 DNA Mariner 32 78 -2 * 457 316 163 3 chr20 1048418 1048706 -71105176 + L2 LINE L2 1873 2206 -1108 * 1001 204 6 0 chr20 1048704 1048885 -71104997 - MER5A DNA MER1_type -6 183 2 * 1779 322 93 16 chr20 1048885 1048917 -71104965 + L2 LINE L2 2172 2200 -1113 728 225 23 17 chr20 1048917 1049090 -71104792 - MER5B DNA MER1_type -3 175 2 1779 322 93 16 chr20 1049090 1050114 -71103768 + L2 LINE L2 2200 3298 -15 212 313 0 0 chr20 1050114 1050162 -71103720 + polypurine Low_complexity Low_complexity 5 52 0 274 321 64 9 chr20 1050330 1050439 -71103443 + L2 LINE L2 3158 3272 0 327 233 381 0 chr20 1050974 1051163 -71102719 + L2 LINE L2 2905 3165 -148 21 95 0 0 chr20 1051178 1051241 -71102641 + AT_rich Low_complexity Low_complexity 1 63 0 2295 100 0 0 chr20 1051500 1051801 -71102081 - AluSc SINE Alu -8 301 1 1493 265 47 22 chr20 1051884 1052630 -71101252 - L1MEc LINE L1 -4714 1880 934 1540 271 149 17 chr20 1053199 1053842 -71100040 + L2 LINE L2 1252 1979 -1335 391 264 11 0 chr20 1053844 1053935 -71099947 + L2 LINE L2 2081 2172 -1142 969 181 65 138 chr20 1053965 1054335 -71099547 - MLT1A1 LTR MaLR -22 343 1 320 277 71 9 chr20 1054339 1054451 -71099431 + L2 LINE L2 2186 2304 -1010 513 296 90 17 chr20 1054708 1055052 -71098830 - L1ME LINE L1 -533 5629 5261 257 284 61 41 chr20 1055169 1055366 -71098516 - L1ME3A LINE L1 -5 6165 5965 2531 245 49 50 chr20 1055450 1055863 -71098019 - L1MC5 LINE L1 -429 7532 7120 1649 177 32 62 chr20 1055863 1056264 -71097618 + MLT1B LTR MaLR 1 389 -1 2531 245 49 50 chr20 1056264 1056920 -71096962 - L1MC5 LINE L1 -841 7120 6471 229 278 67 100 chr20 1057156 1057323 -71096559 - HAL1b LINE L1 -690 658 487 2161 106 0 0 chr20 1057323 1057616 -71096266 + AluSx SINE Alu 1 293 -19 229 278 67 100 chr20 1057616 1057787 -71096095 - HAL1b LINE L1 -861 487 312 2257 89 3 0 chr20 1057787 1058091 -71095791 + AluSg SINE Alu 1 305 -5 229 278 67 100 chr20 1058091 1058363 -71095519 - HAL1b LINE L1 -1036 312 67 1316 178 50 23 chr20 1058846 1059105 -71094777 - MLT1C LTR MaLR -201 266 1 2091 136 120 26 chr20 1059450 1059690 -71094192 - MSTA LTR MaLR 0 428 135 2052 132 0 0 chr20 1059690 1059993 -71093889 + AluSx SINE Alu 1 303 -9 2091 136 120 26 chr20 1059993 1060143 -71093739 - MSTA LTR MaLR -293 135 1 229 263 32 0 chr20 1060438 1060533 -71093349 + MER113 DNA MER1_type? 39 136 -385 26 50 0 0 chr20 1060533 1060573 -71093309 + AT_rich Low_complexity Low_complexity 1 40 0 1216 263 22 19 chr20 1060927 1061084 -71092798 + MER113 DNA MER1_type? 156 311 -210 919 127 0 15 chr20 1061084 1061218 -71092664 + FLAM_C SINE Alu 1 132 -1 1216 263 22 19 chr20 1061218 1061425 -71092457 + MER113 DNA MER1_type? 311 521 0 351 204 57 34 chr20 1061505 1061593 -71092289 - MLT1H LTR MaLR -6 543 454 494 253 71 45 chr20 1061680 1061834 -71092048 - MLT1H LTR MaLR -226 323 166 266 213 82 16 chr20 1061848 1061909 -71091973 - MLT1H LTR MaLR -484 65 1 1968 122 3 7 chr20 1062457 1062752 -71091130 + AluSx SINE Alu 1 294 -18 1962 216 61 49 chr20 1062812 1063711 -71090171 - L1MDa LINE L1 -3413 3127 2205 249 260 52 10 chr20 1063711 1063807 -71090075 + MER69 DNA AcHobo 2412 2511 -15 1802 134 30 23 chr20 1063817 1064116 -71089766 + AluSx SINE Alu 3 303 -9 1851 114 0 0 chr20 1064597 1064851 -71089031 - AluSx SINE Alu -58 254 1 704 230 29 113 chr20 1064855 1065199 -71088683 + L2 LINE L2 2988 3302 -11 198 0 0 0 chr20 1065199 1065221 -71088661 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 798 264 55 78 chr20 1065843 1066104 -71087778 - MER102b DNA MER1_type -1102 326 72 2128 204 131 17 chr20 1066104 1066632 -71087250 - MLT1G LTR MaLR -2 588 1 798 264 55 78 chr20 1066632 1066677 -71087205 - MER102b DNA MER1_type -1356 72 27 1924 155 82 12 chr20 1067072 1067413 -71086469 + MLT1A1 LTR MaLR 1 365 0 272 271 113 40 chr20 1067560 1067711 -71086171 - MIR SINE MIR -71 191 30 191 305 126 46 chr20 1067729 1067903 -71085979 - L2 LINE L2 -421 2893 2706 339 293 91 47 chr20 1068263 1068516 -71085366 + MLT1K LTR MaLR 210 473 -115 190 225 7 176 chr20 1068607 1068659 -71085223 + MIR SINE MIR 102 117 -145 2270 122 0 0 chr20 1068659 1068963 -71084919 + AluSx SINE Alu 1 304 -8 190 225 7 176 chr20 1068963 1069052 -71084830 + MIR SINE MIR 117 219 -43 248 227 0 0 chr20 1069077 1069143 -71084739 + L1M4 LINE L1 4489 4554 -1592 1390 195 38 30 chr20 1069259 1069629 -71084253 + MER93b LTR ERV1 1 373 0 925 272 66 12 chr20 1069662 1069997 -71083885 + MLT1I LTR MaLR 39 391 -18 22 0 0 0 chr20 1070161 1070183 -71083699 + AT_rich Low_complexity Low_complexity 1 22 0 456 214 90 28 chr20 1070197 1070342 -71083540 - MER103 DNA DNA -12 154 1 335 260 49 123 chr20 1070435 1070639 -71083243 - MIR SINE MIR -58 204 16 600 238 8 16 chr20 1070968 1071094 -71082788 + MER5A DNA MER1_type 62 186 -3 311 290 39 19 chr20 1071096 1071251 -71082631 + MLT1L LTR MaLR 145 302 -313 290 301 171 22 chr20 1071280 1071596 -71082286 - MLT1J LTR MaLR -27 484 122 534 258 6 30 chr20 1072000 1072167 -71081715 + MIR SINE MIR 86 248 -14 252 59 0 0 chr20 1072872 1072906 -71080976 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 180 290 58 14 chr20 1072955 1073024 -71080858 - L2 LINE L2 0 3272 3201 189 262 16 16 chr20 1073128 1073189 -71080693 - L2 LINE L2 -227 3086 3026 548 268 167 35 chr20 1073315 1073662 -71080220 - MLT1I LTR MaLR 0 409 17 220 289 0 67 chr20 1073684 1073774 -71080108 - L2 LINE L2 -289 2983 2900 416 315 219 0 chr20 1073819 1073965 -71079917 - MIR SINE MIR -83 179 2 424 298 160 45 chr20 1074056 1074505 -71079377 - Charlie8 DNA MER1_type -1891 526 26 2067 234 14 14 chr20 1074540 1075028 -71078854 + MLT1F LTR MaLR 1 488 -54 775 191 78 0 chr20 1075084 1075225 -71078657 - MER58A DNA MER1_type 0 157 6 211 260 41 14 chr20 1075920 1075993 -71077889 + GA-rich Low_complexity Low_complexity 1 75 0 243 297 93 25 chr20 1076183 1076301 -71077581 - MLT1K LTR MaLR -317 271 146 225 224 9 75 chr20 1076287 1076394 -71077488 - MLT1L LTR MaLR -402 213 114 * 487 283 121 56 chr20 1076798 1077120 -71076762 - L2 LINE L2 -94 3178 2836 2239 96 24 0 chr20 1077145 1077438 -71076444 - AluSg SINE Alu -10 300 1 349 230 20 79 chr20 1077785 1077937 -71075945 + L1ME LINE L1 5619 5761 -360 186 294 59 15 chr20 1078027 1078095 -71075787 + MER5C DNA MER1_type 20 90 -234 297 229 14 0 chr20 1078452 1078522 -71075360 - MLT1J LTR MaLR -332 179 109 3584 156 55 35 chr20 1078957 1078991 -71074891 - MER44D DNA MER2_type -1882 605 573 2419 97 0 0 chr20 1078991 1079299 -71074583 - AluSc SINE Alu -1 308 1 3584 156 55 35 chr20 1079299 1079957 -71073925 - MER44D DNA MER2_type -1914 573 27 327 235 0 0 chr20 1079965 1080063 -71073819 + (TA)n Simple_repeat Simple_repeat 1 98 0 22 0 0 0 chr20 1080225 1080247 -71073635 + AT_rich Low_complexity Low_complexity 1 22 0 225 182 73 0 chr20 1080285 1080340 -71073542 + Charlie8 DNA MER1_type 2356 2414 -3 377 263 46 66 chr20 1081029 1081181 -71072701 - MIR3 SINE MIR -29 179 31 224 343 0 57 chr20 1081293 1081363 -71072519 - MIR SINE MIR -111 97 32 221 298 115 0 chr20 1081495 1081599 -71072283 + MIR SINE MIR 77 192 -70 300 27 0 0 chr20 1081680 1081717 -71072165 + (TG)n Simple_repeat Simple_repeat 2 38 0 286 286 12 0 chr20 1081738 1081822 -71072060 + CT-rich Low_complexity Low_complexity 2 86 0 243 0 0 0 chr20 1081990 1082017 -71071865 + (A)n Simple_repeat Simple_repeat 1 27 0 2535 259 67 10 chr20 1082359 1083494 -71070388 - L1ME3A LINE L1 -9 6161 4960 1343 178 39 70 chr20 1083497 1083852 -71070030 - MLT1A2 LTR MaLR 0 374 31 532 271 122 7 chr20 1083914 1084202 -71069680 - L1ME3A LINE L1 -1194 4952 4632 185 260 40 0 chr20 1084769 1084819 -71069063 - MIR SINE MIR 0 262 211 4417 170 49 53 chr20 1084822 1084954 -71068928 - L1ME1 LINE L1 -2 6663 6532 1401 113 19 0 chr20 1084954 1085166 -71068716 + L1MC1 LINE L1 6118 6333 0 4417 170 49 53 chr20 1085166 1085929 -71067953 - L1ME1 LINE L1 -133 6532 5767 1992 91 0 36 chr20 1085929 1086205 -71067677 - AluSq SINE Alu -7 306 41 4417 170 49 53 chr20 1086205 1086606 -71067276 - L1ME1 LINE L1 -898 5767 5366 2286 118 0 10 chr20 1086606 1086919 -71066963 + AluSg SINE Alu 1 310 0 4417 170 49 53 chr20 1086919 1087647 -71066235 - L1ME1 LINE L1 -1299 5366 4654 24 0 0 0 chr20 1087746 1087770 -71066112 + AT_rich Low_complexity Low_complexity 1 24 0 5483 191 63 88 chr20 1087794 1088818 -71065064 - L1ME1 LINE L1 -4574 2072 1137 1797 148 22 11 chr20 1088818 1089096 -71064786 - AluJo SINE Alu -13 299 19 5483 191 63 88 chr20 1089096 1090206 -71063676 - L1ME1 LINE L1 -5509 1137 1 894 169 40 58 chr20 1090207 1090415 -71063467 - MIR SINE MIR -43 219 18 478 261 51 14 chr20 1090445 1090583 -71063299 + MIR3 SINE MIR 24 166 -42 703 191 190 13 chr20 1091061 1091363 -71062519 + L2 LINE L2 2780 3132 -181 226 231 66 33 chr20 1092285 1092376 -71061506 - MIR SINE MIR -41 221 128 779 143 102 168 chr20 1092436 1092848 -71061034 + LTR37A LTR ERV1 42 426 0 320 259 0 25 chr20 1092969 1093050 -71060832 - MIR SINE MIR -60 148 81 222 37 0 0 chr20 1093061 1093088 -71060794 + (TG)n Simple_repeat Simple_repeat 2 28 0 413 209 0 23 chr20 1093353 1093439 -71060443 - MIR SINE MIR -156 106 23 371 234 298 13 chr20 1093452 1093610 -71060272 + MIR SINE MIR 47 249 -13 199 225 0 0 chr20 1093578 1093618 -71060264 + L2 LINE L2 3263 3302 -11 * 446 283 129 39 chr20 1093641 1093874 -71060008 - MIR SINE MIR 0 262 9 685 185 0 30 chr20 1093886 1094021 -71059861 - L2 LINE L2 0 3313 3183 505 293 155 0 chr20 1094712 1094893 -71058989 + MIR SINE MIR 4 212 -50 1353 213 67 6 chr20 1095336 1095697 -71058185 + L1ME1 LINE L1 5503 5885 -281 228 185 19 19 chr20 1096068 1096122 -71057760 + LTR16A LTR ERVL 381 434 -16 812 199 43 78 chr20 1096123 1096216 -71057666 + L1ME1 LINE L1 5903 5998 -336 2222 155 75 10 chr20 1096216 1096616 -71057266 + MSTB LTR MaLR 1 426 0 812 199 43 78 chr20 1096616 1096807 -71057075 + L1ME1 LINE L1 5998 6332 -2 313 213 38 0 chr20 1096838 1096918 -71056964 + L1ME1 LINE L1 6068 6150 -16 2355 96 0 0 chr20 1096924 1097215 -71056667 + AluSx SINE Alu 1 291 -21 373 171 38 38 chr20 1097231 1097336 -71056546 + MER97a DNA MER1_type? 759 863 -31 3076 189 16 0 chr20 1097347 1098071 -71055811 + L1M3 LINE L1 4717 5448 -732 851 137 8 15 chr20 1098072 1098203 -71055679 + FLAM_C SINE Alu 1 130 -13 794 115 21 103 chr20 1098203 1098365 -71055517 + L1MC/D LINE L1 5441 5575 -596 374 193 12 0 chr20 1098365 1098443 -71055439 + L1MB4 LINE L1 6097 6180 0 794 115 21 103 chr20 1098443 1098469 -71055413 + L1MC/D LINE L1 5575 5602 -569 879 95 0 0 chr20 1098478 1098594 -71055288 - AluY SINE Alu -11 300 185 229 260 26 13 chr20 1098733 1098810 -71055072 + L1MB7 LINE L1 2983 3060 -3086 * 250 253 25 13 chr20 1098794 1098873 -71055009 + L1MB7 LINE L1 2981 3060 -3086 238 234 26 13 chr20 1098974 1099051 -71054831 + L1MB7 LINE L1 2972 3049 -3097 229 260 26 13 chr20 1099170 1099247 -71054635 + L1MB7 LINE L1 2983 3060 -3086 * 236 253 25 13 chr20 1099231 1099310 -71054572 + L1MB7 LINE L1 2981 3060 -3086 225 212 30 15 chr20 1099296 1099362 -71054520 + L1MB7 LINE L1 2983 3049 -3097 * 229 260 26 13 chr20 1099359 1099436 -71054446 + L1MB7 LINE L1 2983 3060 -3086 250 253 25 13 chr20 1099546 1099625 -71054257 + L1MB7 LINE L1 2981 3060 -3086 242 253 25 13 chr20 1099672 1099751 -71054131 + L1MB7 LINE L1 2981 3060 -3086 243 247 26 13 chr20 1099863 1099940 -71053942 + L1MB7 LINE L1 2983 3060 -3086 250 253 25 13 chr20 1099987 1100066 -71053816 + L1MB7 LINE L1 2981 3060 -3086 226 194 32 16 chr20 1100115 1100177 -71053705 + L1MB7 LINE L1 2983 3045 -3101 1952 213 92 14 chr20 1100178 1100895 -71052987 + L1MB7 LINE L1 2983 3755 -2391 2785 154 36 11 chr20 1100899 1101410 -71052472 + L1MB7 LINE L1 4256 4753 -1417 1959 115 0 11 chr20 1101410 1101680 -71052202 + AluSq SINE Alu 2 268 -45 2785 154 36 11 chr20 1101680 1101796 -71052086 + L1MB7 LINE L1 4753 5975 -195 2025 154 68 0 chr20 1101796 1102178 -71051704 + L1MD2 LINE L1 5938 6345 -14 2369 215 44 8 chr20 1102190 1102803 -71051079 + L1ME1 LINE L1 5514 6148 -18 808 173 8 8 chr20 1103592 1103725 -71050157 + FLAM_A SINE Alu 1 133 0 2163 122 7 0 chr20 1104793 1105096 -71048786 + AluSx SINE Alu 1 305 -7 460 235 203 45 chr20 1105415 1105726 -71048156 + HAL1 LINE L1 12 371 -2136 857 316 47 26 chr20 1105729 1106195 -71047687 + HAL1 LINE L1 410 885 -1622 560 199 44 82 chr20 1106310 1106545 -71047337 + L1MA10 LINE L1 5949 6332 -2 22 0 0 0 chr20 1106553 1106575 -71047307 + AT_rich Low_complexity Low_complexity 1 22 0 980 253 63 127 chr20 1106575 1106829 -71047053 + HAL1 LINE L1 1024 1293 -1214 337 216 0 14 chr20 1106829 1106903 -71046979 + AluJo SINE Alu 66 138 -164 980 253 63 127 chr20 1106903 1107553 -71046329 + HAL1 LINE L1 1293 1939 -568 3488 37 103 0 chr20 1107680 1108136 -71045746 + L1PA5 LINE L1 5652 6154 0 3205 34 0 0 chr20 1108149 1108532 -71045350 + L1PA5 LINE L1 5770 6152 -2 624 226 167 0 chr20 1108627 1108813 -71045069 + MLT1J LTR MaLR 1 217 -294 576 169 136 32 chr20 1108870 1109024 -71044858 + MLT1J LTR MaLR 342 511 0 536 289 59 33 chr20 1109070 1109343 -71044539 + HAL1 LINE L1 2225 2504 -3 213 39 0 0 chr20 1110318 1110344 -71043538 + (T)n Simple_repeat Simple_repeat 1 26 0 182 323 31 0 chr20 1110875 1110940 -71042942 - L3b LINE CR1 -223 1360 1294 28 61 0 0 chr20 1113704 1113753 -71040129 + AT_rich Low_complexity Low_complexity 1 49 0 212 0 36 0 chr20 1115475 1115503 -71038379 + (TTTA)n Simple_repeat Simple_repeat 4 32 0 1855 174 0 0 chr20 1115857 1116155 -71037727 + AluJb SINE Alu 1 298 -14 1745 187 81 49 chr20 1117319 1117789 -71036093 - MER66B LTR ERV1 -1 485 1 2052 121 0 13 chr20 1119263 1119571 -71034311 + AluSx SINE Alu 1 285 -27 30 0 0 0 chr20 1119771 1119801 -71034081 + AT_rich Low_complexity Low_complexity 1 30 0 273 254 21 113 chr20 1120375 1120517 -71033365 - MIR3 SINE MIR -3 205 77 568 247 6 25 chr20 1120938 1121100 -71032782 - MIR SINE MIR -102 160 2 421 265 45 8 chr20 1121694 1121826 -71032056 - MIR SINE MIR -86 176 40 198 0 0 0 chr20 1122252 1122274 -71031608 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 2196 122 0 0 chr20 1122322 1122617 -71031265 + AluSx SINE Alu 1 295 -17 798 174 192 25 chr20 1122750 1123026 -71030856 + MER5C DNA MER1_type 1 322 -2 1715 145 40 27 chr20 1123347 1123644 -71030238 + AluJo SINE Alu 1 301 -11 257 238 111 63 chr20 1123870 1123996 -71029886 + L2 LINE L2 3169 3300 -13 2185 253 114 39 chr20 1124456 1124548 -71029334 + L2 LINE L2 1899 1983 -1330 2114 163 14 17 chr20 1124548 1124910 -71028972 + MLT1A1 LTR MaLR 1 361 -4 2185 253 114 39 chr20 1124910 1125227 -71028655 + L2 LINE L2 1983 2275 -1038 1621 141 14 186 chr20 1125227 1125668 -71028214 - MLT1A1 LTR MaLR 0 365 1 2185 253 114 39 chr20 1125668 1126557 -71027325 + L2 LINE L2 2275 3313 0 843 318 110 15 chr20 1126939 1127576 -71026306 + L2 LINE L2 2599 3305 -8 268 307 24 24 chr20 1127690 1127817 -71026065 - L2 LINE L2 -8 3305 3179 187 291 244 0 chr20 1128743 1128829 -71025053 + MIR SINE MIR 20 126 -136 1055 68 0 0 chr20 1128850 1128982 -71024900 - AluSg/x SINE Alu -5 307 176 430 250 192 0 chr20 1128986 1129142 -71024740 - MIR SINE MIR -13 249 64 317 279 23 0 chr20 1129208 1129294 -71024588 + MIR SINE MIR 158 245 -17 2158 93 0 3 chr20 1131179 1131469 -71022413 + AluSx SINE Alu 1 289 -23 234 252 0 73 chr20 1131738 1131861 -71022021 + (CGGGG)n Simple_repeat Simple_repeat 5 118 0 344 136 6 62 chr20 1132360 1132537 -71021345 + (CGGGG)n Simple_repeat Simple_repeat 5 171 0 368 224 14 41 chr20 1132562 1132709 -71021173 + (CGGGG)n Simple_repeat Simple_repeat 2 144 0 180 0 0 0 chr20 1132730 1132750 -71021132 + (CGG)n Simple_repeat Simple_repeat 3 22 0 458 285 86 5 chr20 1133031 1133217 -71020665 + MIR SINE MIR 54 254 -8 186 43 0 0 chr20 1133218 1133241 -71020641 + (TTA)n Simple_repeat Simple_repeat 1 23 0 291 303 62 51 chr20 1133469 1133647 -71020235 - MIR SINE MIR -48 214 35 339 257 89 14 chr20 1133697 1133911 -71019971 + L2 LINE L2 2451 2680 -634 1141 117 6 0 chr20 1133931 1134102 -71019780 + MER1B DNA MER1_type 51 222 -75 499 128 0 26 chr20 1134103 1134181 -71019701 + MER1B DNA MER1_type 254 329 0 2173 99 7 0 chr20 1134224 1134508 -71019374 + AluSx SINE Alu 1 286 -26 1401 124 13 13 chr20 1134532 1134758 -71019124 - LTR13 LTR ERVK 0 1007 782 42006 62 9 6 chr20 1134758 1134888 -71018994 - L1PA5 LINE L1 -1 6153 6025 2274 81 0 17 chr20 1134888 1135185 -71018697 - AluSp SINE Alu -21 292 1 42006 62 9 6 chr20 1135185 1136614 -71017268 - L1PA5 LINE L1 -129 6025 4602 2400 68 0 0 chr20 1136614 1136893 -71016989 + AluY SINE Alu 1 279 -32 983 59 46 0 chr20 1136893 1137046 -71016836 + GA-rich Low_complexity Low_complexity 2 161 0 42006 62 9 6 chr20 1137046 1141615 -71012267 - L1PA5 LINE L1 -1551 4603 4 1562 191 41 61 chr20 1141620 1142384 -71011498 - LTR13 LTR ERVK -207 800 1 190 288 63 54 chr20 1142401 1142512 -71011370 + L2 LINE L2 2734 2845 -469 3331 249 66 16 chr20 1142517 1143382 -71010500 + MER69 DNA AcHobo 5 912 -1614 2503 210 121 21 chr20 1143378 1143435 -71010447 + MER69 DNA AcHobo 1707 1757 -769 * 3008 162 19 47 chr20 1143435 1144008 -71009874 + MER41D LTR ERV1 1 557 0 2503 210 121 21 chr20 1144008 1144694 -71009188 + MER69 DNA AcHobo 1757 2524 -2 418 303 8 8 chr20 1144828 1144947 -71008935 + L2 LINE L2 3191 3309 -4 190 265 174 15 chr20 1145026 1145158 -71008724 - MIR SINE MIR -78 184 32 1128 191 131 72 chr20 1145623 1145978 -71007904 + MLT1D LTR MaLR 34 504 -106 338 355 44 15 chr20 1146295 1146498 -71007384 + MIR SINE MIR 2 210 -52 952 241 31 0 chr20 1146568 1146796 -71007086 - MIR SINE MIR -26 236 2 2307 89 3 0 chr20 1146817 1147110 -71006772 + AluSp SINE Alu 1 294 -19 3299 93 2 23 chr20 1147116 1147599 -71006283 + L1PA8 LINE L1 5696 6168 -4 801 264 81 4 chr20 1147619 1147854 -71006028 - MIR SINE MIR 0 262 10 192 97 0 0 chr20 1147855 1147886 -71005996 + (ATG)n Simple_repeat Simple_repeat 3 33 0 243 266 0 16 chr20 1147886 1147950 -71005932 + GA-rich Low_complexity Low_complexity 3 65 0 357 223 83 68 chr20 1148128 1148417 -71005465 + MLT1F1 LTR MaLR 185 554 -13 2080 207 154 24 chr20 1149269 1149930 -71003952 - LTR50 LTR ERVL 0 795 49 336 256 107 135 chr20 1150339 1150807 -71003075 - MLT1K LTR MaLR -2 586 132 286 318 9 0 chr20 1151100 1151207 -71002675 - MIR SINE MIR -71 137 30 210 329 40 0 chr20 1151656 1151732 -71002150 + MIR SINE MIR 116 194 -68 2509 173 17 4 chr20 1151743 1152216 -71001666 + Charlie1b DNA MER1_type 45 523 0 1573 149 38 8 chr20 1152291 1152574 -71001308 - AluJo SINE Alu 0 312 36 2338 98 0 7 chr20 1152982 1153288 -71000594 + AluSx SINE Alu 1 304 -8 264 239 14 14 chr20 1154203 1154274 -70999608 + LTR16C LTR ERVL 421 491 0 466 260 27 7 chr20 1154325 1154471 -70999411 - MIR SINE MIR -33 229 81 384 251 64 98 chr20 1155305 1155540 -70998342 + MLT1L LTR MaLR 189 415 -200 4194 90 15 0 chr20 1155664 1156210 -70997672 - MER41A LTR ERV1 0 554 1 484 261 39 20 chr20 1156236 1156389 -70997493 - L2 LINE L2 0 3313 3158 26 23 0 23 chr20 1156429 1156449 -70997433 + AT_rich Low_complexity Low_complexity 1 20 -23 1897 88 0 4 chr20 1156449 1156689 -70997193 + AluSq SINE Alu 1 239 -74 26 23 0 23 chr20 1156689 1156712 -70997170 + AT_rich Low_complexity Low_complexity 20 43 0 415 269 97 7 chr20 1156781 1156926 -70996956 + L1MEd LINE L1 597 754 -5365 1678 148 0 19 chr20 1156980 1157243 -70996639 + AluJo SINE Alu 1 258 -54 2330 122 0 0 chr20 1157315 1157618 -70996264 - AluSq SINE Alu -10 303 1 2017 191 13 64 chr20 1157831 1158301 -70995581 + MER41B LTR ERV1 157 602 -33 314 173 49 12 chr20 1158590 1158671 -70995211 + MIR SINE MIR 36 119 -89 604 247 66 52 chr20 1159143 1159434 -70994448 - MLT1H LTR MaLR -33 376 64 220 283 43 0 chr20 1159709 1159801 -70994081 - MIR SINE MIR -3 259 164 495 278 63 0 chr20 1159801 1159927 -70993955 + MER119 DNA MER1_type 1 134 -449 544 191 63 32 chr20 1159927 1160053 -70993829 + MER119 DNA MER1_type 454 583 0 326 252 36 18 chr20 1160102 1160213 -70993669 - MIR SINE MIR -101 161 49 181 128 43 0 chr20 1160847 1160894 -70992988 + (TA)n Simple_repeat Simple_repeat 2 50 0 42 47 0 24 chr20 1160910 1160953 -70992929 + AT_rich Low_complexity Low_complexity 1 43 -40 1853 153 43 0 chr20 1160953 1161235 -70992647 + AluSx SINE Alu 1 294 -18 42 47 0 24 chr20 1161235 1161276 -70992606 + AT_rich Low_complexity Low_complexity 43 83 0 1101 227 196 44 chr20 1161299 1161708 -70992174 + MLT1J LTR MaLR 1 471 -40 899 268 197 29 chr20 1162432 1162843 -70991039 + LTR16C LTR ERVL 3 482 -9 1191 220 91 49 chr20 1162856 1163143 -70990739 + MLT1A1 LTR MaLR 1 307 -58 1671 194 17 3 chr20 1163143 1163442 -70990440 - AluJo SINE Alu -9 303 1 1191 220 91 49 chr20 1163442 1163504 -70990378 + MLT1A1 LTR MaLR 307 365 0 634 238 94 30 chr20 1164750 1164985 -70988897 + MIR SINE MIR 8 257 -5 2376 107 0 0 chr20 1165265 1165574 -70988308 - AluSq SINE Alu -4 309 1 1561 259 63 11 chr20 1165596 1166059 -70987823 - MLT1J LTR MaLR -18 493 7 2475 60 0 7 chr20 1166149 1166448 -70987434 - AluY SINE Alu -14 297 1 893 245 176 31 chr20 1166568 1167072 -70986810 + MLT1G LTR MaLR 13 590 0 430 111 0 0 chr20 1167783 1167846 -70986036 - L1MC3 LINE L1 -21 7764 7702 269 105 0 0 chr20 1167848 1167886 -70985996 - MSTB LTR MaLR 0 432 395 1671 171 11 7 chr20 1167887 1168162 -70985720 + AluJo SINE Alu 1 276 -36 1164 111 0 0 chr20 1168172 1168245 -70985637 + (GAA)n Simple_repeat Simple_repeat 1 253 0 1164 111 0 0 chr20 1168245 1168425 -70985457 + (GAA)n Simple_repeat Simple_repeat 1 180 0 2186 159 20 30 chr20 1168491 1168894 -70984988 - MSTB LTR MaLR -27 399 1 4008 181 55 49 chr20 1168894 1169714 -70984168 - L1MC3 LINE L1 -81 7909 7095 617 57 52 38 chr20 1169714 1169930 -70983952 + (TG)n Simple_repeat Simple_repeat 1 219 0 4008 181 55 49 chr20 1169930 1170206 -70983676 - L1MC3 LINE L1 -895 7095 6822 252 0 0 0 chr20 1170206 1170234 -70983648 + (TG)n Simple_repeat Simple_repeat 2 29 0 4008 181 55 49 chr20 1170234 1170356 -70983526 - L1MC3 LINE L1 -1168 6822 6496 600 346 42 34 chr20 1170467 1170960 -70982922 + L2 LINE L2 2714 3205 -67 1222 257 81 28 chr20 1170984 1171381 -70982501 - L2 LINE L2 -5 3308 2891 313 287 166 0 chr20 1171377 1171534 -70982348 - MIR SINE MIR -49 213 31 * 286 319 0 0 chr20 1171981 1172053 -70981829 - MER96 DNA MER1_type? -103 72 1 214 284 37 102 chr20 1172125 1172340 -70981542 - L2 LINE L2 -85 3187 2987 207 135 39 58 chr20 1172556 1172608 -70981274 + G-rich Low_complexity Low_complexity 3 53 0 21 36 0 0 chr20 1172668 1172696 -70981186 + GC_rich Low_complexity Low_complexity 1 28 0 247 218 0 39 chr20 1172896 1172974 -70980908 + C-rich Low_complexity Low_complexity 5 79 0 23 0 0 0 chr20 1173187 1173210 -70980672 + GC_rich Low_complexity Low_complexity 1 23 0 363 96 0 0 chr20 1173733 1173785 -70980097 + (TG)n Simple_repeat Simple_repeat 1 52 0 185 0 0 39 chr20 1175005 1175031 -70978851 + (TTCA)n Simple_repeat Simple_repeat 4 28 0 372 22 0 0 chr20 1175054 1175099 -70978783 + (CA)n Simple_repeat Simple_repeat 2 46 0 563 254 75 79 chr20 1175336 1175615 -70978267 - MER102b DNA MER1_type -51 290 13 577 236 93 25 chr20 1176243 1176404 -70977478 - MIR SINE MIR -40 222 51 408 301 68 17 chr20 1176450 1176626 -70977256 - MIR SINE MIR -23 239 55 331 213 27 0 chr20 1178075 1178150 -70975732 + MIR3 SINE MIR 109 185 -23 680 220 38 25 chr20 1180004 1180163 -70973719 + MIR SINE MIR 26 186 -76 1483 291 76 17 chr20 1180215 1180566 -70973316 + L2 LINE L2 2396 2725 -588 445 277 136 0 chr20 1180566 1180721 -70973161 + MER69A DNA AcHobo 1 176 -1 1483 291 76 17 chr20 1180721 1181235 -70972647 + L2 LINE L2 2725 3313 0 206 349 0 0 chr20 1181799 1181862 -70972020 + (CA)n Simple_repeat Simple_repeat 2 64 0 274 256 73 0 chr20 1182148 1182230 -70971652 + MIR SINE MIR 30 117 -91 202 225 303 0 chr20 1182502 1182591 -70971291 + L3 LINE CR1 1347 1462 -115 617 254 57 17 chr20 1183025 1183202 -70970680 + MIR SINE MIR 76 259 -3 230 227 0 15 chr20 1183563 1183629 -70970253 + G-rich Low_complexity Low_complexity 5 69 0 336 254 183 24 chr20 1183675 1183801 -70970081 + MIR SINE MIR 116 261 -1 520 251 133 5 chr20 1184377 1184572 -70969310 - MER102b DNA MER1_type 0 341 122 273 138 292 0 chr20 1184797 1184862 -70969020 - L2 LINE L2 0 3313 3230 201 39 0 0 chr20 1185328 1185354 -70968528 + (CAAAC)n Simple_repeat Simple_repeat 1 26 0 671 202 0 0 chr20 1185391 1185505 -70968377 + FLAM_A SINE Alu 1 114 -19 661 145 34 17 chr20 1185506 1185623 -70968259 + AluJo/FRAM SINE Alu 191 309 -3 758 257 16 5 chr20 1185952 1186139 -70967743 - MIR SINE MIR -21 241 53 234 192 270 11 chr20 1186328 1186425 -70967457 - MIR SINE MIR -9 199 85 262 232 103 3 chr20 1186857 1186957 -70966925 + MIR3 SINE MIR 47 161 -47 182 94 0 31 chr20 1187389 1187421 -70966461 + MIR SINE MIR 43 73 -189 245 301 97 29 chr20 1187794 1187897 -70965985 + MIR SINE MIR 81 190 -72 184 259 74 19 chr20 1188096 1188150 -70965732 + L2 LINE L2 1183 1239 -2075 * 531 169 208 8 chr20 1188120 1188250 -70965632 - MER5A DNA MER1_type -6 183 28 207 268 141 78 chr20 1188291 1188433 -70965449 - MER5A DNA MER1_type -5 184 34 3525 159 70 32 chr20 1190317 1191057 -70962825 + L1MB7 LINE L1 5417 6184 0 201 342 34 43 chr20 1191995 1192112 -70961770 - MIR3 SINE MIR -78 130 15 334 336 60 0 chr20 1192397 1192546 -70961336 - MIR3 SINE MIR -9 199 42 428 257 142 0 chr20 1193479 1193592 -70960290 + MIR SINE MIR 18 146 -116 180 243 0 0 chr20 1193840 1193877 -70960005 + L2 LINE L2 2562 2598 -716 33 25 0 0 chr20 1195471 1195511 -70958371 + AT_rich Low_complexity Low_complexity 1 40 0 588 199 156 7 chr20 1195718 1195859 -70958023 - MER106A DNA MER1_type -74 162 1 24 32 0 0 chr20 1197933 1197964 -70955918 + AT_rich Low_complexity Low_complexity 1 31 0 280 145 24 145 chr20 1198042 1198125 -70955757 + L1ME LINE L1 5805 5877 -244 991 201 72 5 chr20 1198928 1199137 -70954745 + AluJo SINE Alu 1 223 -89 24 0 0 0 chr20 1199177 1199201 -70954681 + AT_rich Low_complexity Low_complexity 1 24 0 1332 106 0 0 chr20 1199312 1199492 -70954390 - AluSg/x SINE Alu -8 304 125 202 211 0 0 chr20 1200114 1200152 -70953730 - L2 LINE L2 -19 3253 3216 6934 47 12 11 chr20 1200196 1201051 -70952831 + HERVL-A1 LTR ERVL 4798 5653 -1 3031 78 34 25 chr20 1201052 1201490 -70952392 + MLT2A1 LTR ERVL 1 442 -2 2903 240 102 26 chr20 1201491 1202693 -70951189 - L1ME LINE L1 -4393 1687 396 447 266 175 7 chr20 1203638 1203781 -70950101 - MER5A DNA MER1_type -1 188 22 413 232 86 78 chr20 1204490 1204721 -70949161 + MLT1E3-int LTR MaLR 1107 1705 -30 631 255 155 33 chr20 1204734 1205173 -70948709 + MLT1E3 LTR MaLR 1 479 -26 514 306 60 28 chr20 1205298 1205546 -70948336 + L1ME LINE L1 5490 5745 -376 695 294 81 20 chr20 1205547 1205843 -70948039 + L2 LINE L2 2445 2758 -556 511 306 48 34 chr20 1206057 1206263 -70947619 + MIR SINE MIR 50 258 -4 560 307 78 10 chr20 1206827 1207035 -70946847 + MIR SINE MIR 41 261 -1 435 307 108 11 chr20 1207044 1207220 -70946662 + MIR SINE MIR 66 258 -4 1249 246 55 37 chr20 1207365 1207853 -70946029 + L1M4 LINE L1 4884 5380 -766 1269 217 84 10 chr20 1207896 1208195 -70945687 + Charlie1a DNA MER1_type 62 382 -1073 1094 155 0 0 chr20 1208195 1208363 -70945519 - AluJb SINE Alu -14 298 131 1561 184 41 0 chr20 1208366 1208637 -70945245 - AluJb SINE Alu -30 282 1 1162 190 55 51 chr20 1208639 1208913 -70944969 + Charlie1a DNA MER1_type 372 646 -809 3224 143 67 24 chr20 1208916 1209586 -70944296 + Charlie1a DNA MER1_type 749 1447 -8 327 340 37 37 chr20 1210953 1211141 -70942741 + MIR SINE MIR 13 200 -62 393 22 0 0 chr20 1211209 1211255 -70942627 + (ATG)n Simple_repeat Simple_repeat 2 47 0 367 308 109 0 chr20 1211555 1211711 -70942171 - MIR SINE MIR -72 190 18 242 341 64 58 chr20 1212839 1213012 -70940870 + L2 LINE L2 2925 3098 -174 260 193 44 114 chr20 1213161 1213207 -70940675 - L1MD2 LINE L1 -3 6356 6308 1762 148 39 0 chr20 1213207 1213491 -70940391 + AluSq SINE Alu 3 297 -16 260 193 44 114 chr20 1213491 1213558 -70940324 - L1MD2 LINE L1 -51 6308 6251 4082 204 54 33 chr20 1213561 1214276 -70939606 - L1MD1 LINE L1 -183 6059 5361 2000 111 10 13 chr20 1214276 1214582 -70939300 - AluSx SINE Alu -7 305 1 4082 204 54 33 chr20 1214582 1215462 -70938420 - L1MD1 LINE L1 -881 5361 4501 5755 30 0 0 chr20 1215462 1216121 -70937761 + L1PA4 LINE L1 5497 6155 0 4082 204 54 33 chr20 1216121 1216145 -70937737 - L1MD1 LINE L1 -1741 4501 4479 180 0 0 0 chr20 1216145 1216165 -70937717 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 2074 73 3 31 chr20 1216166 1216454 -70937428 - AluSx SINE Alu -32 280 1 4082 204 54 33 chr20 1216454 1216800 -70937082 - L1MD1 LINE L1 -1762 4480 4050 1972 167 75 29 chr20 1217039 1217493 -70936389 - L1MB8 LINE L1 -1 6177 5703 5144 211 42 42 chr20 1217496 1218624 -70935258 - L1MB8 LINE L1 -740 5434 4307 1741 73 0 0 chr20 1218624 1218843 -70935039 - AluY SINE Alu -8 303 85 5144 211 42 42 chr20 1218843 1219180 -70934702 - L1MB8 LINE L1 -1867 4307 3972 1939 128 16 19 chr20 1219184 1219497 -70934385 - AluSx SINE Alu 0 312 1 1227 186 0 5 chr20 1219542 1219763 -70934119 - AluJb SINE Alu -6 306 87 340 259 47 0 chr20 1219766 1219851 -70934031 - L1MB8 LINE L1 -2185 3961 3873 958 118 31 12 chr20 1219854 1220015 -70933867 - AluSg/x SINE Alu -12 300 137 1370 215 43 7 chr20 1220015 1220317 -70933565 - L1MB8 LINE L1 -2264 3882 3570 1145 235 65 65 chr20 1220332 1220916 -70932966 - L1MC5 LINE L1 -47 7914 7331 307 259 3 3 chr20 1221048 1221152 -70932730 - L1MC5 LINE L1 -644 7228 7061 2057 253 71 25 chr20 1221194 1221940 -70931942 + MER20B DNA MER1_type 4 783 -1 291 306 118 35 chr20 1222045 1222215 -70931667 + MIR3 SINE MIR 18 201 -7 6168 224 69 45 chr20 1223892 1224820 -70929062 + L1MC4a LINE L1 2716 3620 -2526 183 80 0 0 chr20 1224820 1224845 -70929037 + (TA)n Simple_repeat Simple_repeat 1 25 0 6168 224 69 45 chr20 1224845 1225816 -70928066 + L1MC4a LINE L1 3620 4676 -1470 2107 110 0 31 chr20 1225816 1226135 -70927747 + AluSc SINE Alu 1 309 0 6168 224 69 45 chr20 1226135 1226414 -70927468 + L1MC4a LINE L1 4676 4947 -1199 330 217 122 26 chr20 1226903 1227018 -70926864 - MIR SINE MIR -14 248 123 905 149 19 88 chr20 1227538 1227753 -70926129 + AluJo SINE Alu 92 291 -21 446 303 141 43 chr20 1227782 1228044 -70925838 - L2 LINE L2 -209 3063 2739 4074 130 50 14 chr20 1228044 1228758 -70925124 - L1MB3 LINE L1 -3 6180 5441 446 303 141 43 chr20 1228758 1228854 -70925028 - L2 LINE L2 -533 2739 2654 1240 130 236 12 chr20 1229106 1229212 -70924670 + AluSx SINE Alu 1 82 -230 2325 64 6 19 chr20 1229212 1229524 -70924358 + AluY SINE Alu 1 308 -3 1240 130 236 12 chr20 1229524 1229671 -70924211 + AluSx SINE Alu 82 311 -1 1064 278 79 31 chr20 1229682 1230139 -70923743 + L1MC4a LINE L1 6175 6653 -1155 * 1886 176 73 38 chr20 1230120 1230546 -70923336 + L1MC1 LINE L1 5891 6331 -2 588 280 138 53 chr20 1231110 1231493 -70922389 + LTR67 LTR ERVL 45 478 -79 1871 127 0 14 chr20 1231493 1231796 -70922086 - AluSx SINE Alu 0 301 3 588 280 138 53 chr20 1231796 1231883 -70921999 + LTR67 LTR ERVL 478 556 -1 238 316 62 28 chr20 1231886 1232063 -70921819 + L1MC/D LINE L1 5737 5919 -1889 369 312 77 72 chr20 1232093 1232455 -70921427 - L2 LINE L2 -74 3239 2876 325 326 136 13 chr20 1232481 1232717 -70921165 - L1ME LINE L1 -325 5796 5532 553 260 107 17 chr20 1232922 1233099 -70920783 - MIR3 SINE MIR -2 206 14 833 270 167 16 chr20 1233577 1234007 -70919875 - L1ME3A LINE L1 -230 5940 5446 257 237 79 0 chr20 1234231 1234307 -70919575 + L1MC4a LINE L1 5150 5231 -915 375 298 203 27 chr20 1234387 1234826 -70919056 + L1MC4a LINE L1 5317 5832 -1976 1897 127 10 16 chr20 1235791 1236105 -70917777 + AluSx SINE Alu 1 312 0 299 257 37 37 chr20 1236111 1236220 -70917662 - MIR SINE MIR -73 135 27 22 35 0 0 chr20 1237243 1237272 -70916610 + AT_rich Low_complexity Low_complexity 1 29 0 771 224 42 63 chr20 1240057 1240294 -70913588 - MIR SINE MIR 0 262 31 564 265 113 11 chr20 1240296 1240481 -70913401 - MIR SINE MIR -10 252 49 673 274 140 31 chr20 1240550 1240747 -70913135 + L2 LINE L2 2503 2677 -637 2211 102 0 19 chr20 1240747 1241062 -70912820 + AluSx SINE Alu 1 309 -3 673 274 140 31 chr20 1241062 1241215 -70912667 + L2 LINE L2 2677 2891 -423 831 254 5 0 chr20 1241239 1241424 -70912458 + L2 LINE L2 2462 2647 -667 758 256 98 61 chr20 1241429 1241808 -70912074 + L2 LINE L2 2921 3313 0 255 368 52 15 chr20 1241917 1242053 -70911829 - MER5A DNA MER1_type -48 141 1 193 312 75 32 chr20 1242245 1242338 -70911544 - L2 LINE L2 -28 3244 3148 2296 75 7 0 chr20 1242360 1242653 -70911229 + AluSg SINE Alu 1 295 -15 223 282 118 0 chr20 1242668 1242753 -70911129 - L2 LINE L2 -302 2970 2876 725 247 11 11 chr20 1242875 1243053 -70910829 - MER97c DNA MER1_type? -912 178 1 1021 218 37 25 chr20 1243963 1244206 -70909676 - LTR16C LTR ERVL 0 491 246 2486 45 3 6 chr20 1244400 1244711 -70909171 + AluY SINE Alu 1 310 -1 220 262 0 82 chr20 1244784 1244845 -70909037 + L2 LINE L2 3137 3192 -80 432 0 0 0 chr20 1244897 1244945 -70908937 + (TG)n Simple_repeat Simple_repeat 2 49 0 209 260 65 39 chr20 1245255 1245332 -70908550 + L2 LINE L2 2977 3055 -217 253 139 0 0 chr20 1245400 1245436 -70908446 - MER97c DNA MER1_type? -2 1088 1053 1710 82 26 4 chr20 1245468 1245699 -70908183 + AluY SINE Alu 1 236 -75 1824 203 7 59 chr20 1295699 1296138 -70857744 - MER41B LTR ERV1 -63 572 157 1303 231 0 0 chr20 1296355 1296654 -70857228 + AluSq SINE Alu 5 303 -10 1568 148 0 19 chr20 1296726 1296989 -70856893 - AluJo SINE Alu -54 258 1 417 269 97 7 chr20 1297043 1297188 -70856694 - L1MEd LINE L1 -5365 754 597 26 23 0 23 chr20 1297257 1297280 -70856602 + AT_rich Low_complexity Low_complexity 1 24 -19 1803 88 0 4 chr20 1297280 1297520 -70856362 - AluSq SINE Alu -74 239 1 26 23 0 23 chr20 1297520 1297540 -70856342 + AT_rich Low_complexity Low_complexity 24 43 0 551 261 39 20 chr20 1297580 1297733 -70856149 + L2 LINE L2 3158 3313 0 4194 90 15 0 chr20 1297759 1298305 -70855577 + MER41A LTR ERV1 1 554 0 384 251 64 98 chr20 1298429 1298664 -70855218 - MLT1L LTR MaLR -200 415 189 532 260 27 7 chr20 1299498 1299644 -70854238 + MIR SINE MIR 81 229 -33 266 239 14 14 chr20 1299695 1299766 -70854116 - LTR16C LTR ERVL 0 491 421 2190 101 0 7 chr20 1300681 1300987 -70852895 - AluSx SINE Alu -8 304 1 1458 153 38 8 chr20 1301395 1301678 -70852204 + AluJo SINE Alu 36 312 0 2483 173 17 4 chr20 1301753 1302226 -70851656 - Charlie1b DNA MER1_type 0 523 45 244 329 40 0 chr20 1302237 1302313 -70851569 - MIR SINE MIR -68 194 116 320 318 9 0 chr20 1302762 1302869 -70851013 + MIR SINE MIR 30 137 -71 358 259 107 135 chr20 1303162 1303630 -70850252 + MLT1K LTR MaLR 132 586 -2 2111 201 157 27 chr20 1304039 1304700 -70849182 + LTR50 LTR ERVL 49 795 0 364 223 83 68 chr20 1305552 1305841 -70848041 - MLT1G3 LTR MaLR -13 554 185 194 217 0 17 chr20 1306025 1306085 -70847797 + CT-rich Low_complexity Low_complexity 1 59 0 192 97 0 0 chr20 1306083 1306114 -70847768 + (CAT)n Simple_repeat Simple_repeat 3 33 0 * 900 264 81 4 chr20 1306115 1306350 -70847532 + MIR SINE MIR 10 262 0 3273 95 2 23 chr20 1306370 1306853 -70847029 - L1PA8 LINE L1 -4 6168 5696 2180 89 3 0 chr20 1306859 1307152 -70846730 - AluSp SINE Alu -19 294 1 1054 241 31 0 chr20 1307173 1307401 -70846481 + MIR SINE MIR 2 236 -26 417 355 44 15 chr20 1307471 1307674 -70846208 - MIR SINE MIR -52 210 2 1132 191 131 72 chr20 1307991 1308346 -70845536 - MLT1D LTR MaLR -106 399 34 193 304 0 18 chr20 1308507 1308563 -70845319 - MIR SINE MIR -100 162 108 246 265 174 15 chr20 1308811 1308943 -70844939 + MIR SINE MIR 32 184 -78 462 303 8 8 chr20 1309022 1309141 -70844741 - L2 LINE L2 -4 3309 3191 184 222 69 56 chr20 1309159 1309231 -70844651 - L2 LINE L2 0 3313 3241 2392 212 118 20 chr20 1309275 1309962 -70843920 - MER69 DNA AcHobo -2 2524 1757 2996 164 19 47 chr20 1309962 1310535 -70843347 - MER41D LTR ERV1 0 557 1 2392 212 118 20 chr20 1310535 1310592 -70843290 - MER69 DNA AcHobo -769 1757 1707 * 3354 247 70 16 chr20 1310588 1311450 -70842432 - MER69 DNA AcHobo -1614 912 5 228 288 63 54 chr20 1311455 1311566 -70842316 - L2 LINE L2 -469 2845 2734 1555 195 41 61 chr20 1311583 1312347 -70841535 + LTR13 LTR ERVK 1 800 -207 42011 61 9 6 chr20 1312352 1316921 -70836961 + L1PA4 LINE L1 4 4559 -1596 1056 58 32 0 chr20 1316921 1317076 -70836806 + (TTTC)n Simple_repeat Simple_repeat 2 161 0 2283 65 0 0 chr20 1317076 1317355 -70836527 - AluY SINE Alu -32 279 1 42011 61 9 6 chr20 1317355 1318789 -70835093 + L1PA4 LINE L1 4559 6028 -127 2146 81 0 17 chr20 1318789 1319086 -70834796 + AluSp SINE Alu 1 292 -21 42011 61 9 6 chr20 1319086 1319215 -70834667 + L1PA4 LINE L1 6028 6155 0 1411 124 13 13 chr20 1319216 1319442 -70834440 + LTR13 LTR ERVK 782 1007 0 2050 99 7 0 chr20 1319466 1319750 -70834132 - AluSx SINE Alu -26 286 1 505 128 0 26 chr20 1319793 1319871 -70834011 - MER1B DNA MER1_type 0 329 254 1141 131 6 0 chr20 1319872 1320048 -70833834 - MER1B DNA MER1_type -75 222 46 409 252 89 14 chr20 1320063 1320277 -70833605 - L2 LINE L2 -634 2680 2451 360 303 62 51 chr20 1320327 1320505 -70833377 + MIR SINE MIR 35 214 -48 186 43 0 0 chr20 1320733 1320756 -70833126 + (TAA)n Simple_repeat Simple_repeat 1 23 0 548 280 86 5 chr20 1320757 1320943 -70832939 - MIR SINE MIR -8 254 54 180 0 0 0 chr20 1321224 1321244 -70832638 + (CCG)n Simple_repeat Simple_repeat 3 22 0 461 157 5 76 chr20 1321304 1321692 -70832190 + (CCCCG)n Simple_repeat Simple_repeat 1 360 0 234 252 0 73 chr20 1322205 1322328 -70831554 + (CCCCG)n Simple_repeat Simple_repeat 5 118 0 2107 90 0 3 chr20 1322597 1322887 -70830995 - AluSx SINE Alu -23 289 1 338 290 40 0 chr20 1324772 1324872 -70829010 - MIR SINE MIR -17 245 142 499 250 192 0 chr20 1324924 1325080 -70828802 + MIR SINE MIR 64 249 -13 1038 68 0 0 chr20 1325084 1325216 -70828666 + AluSg/x SINE Alu 176 307 -5 217 291 244 0 chr20 1325237 1325323 -70828559 - MIR SINE MIR -136 126 20 315 307 24 24 chr20 1326249 1326376 -70827506 + L2 LINE L2 3179 3305 -8 994 320 109 15 chr20 1326490 1327127 -70826755 - L2 LINE L2 -8 3305 2599 21 71 0 0 chr20 1327323 1327365 -70826517 + AT_rich Low_complexity Low_complexity 1 42 0 2537 253 114 39 chr20 1327509 1328398 -70825484 - L2 LINE L2 0 3313 2493 1568 136 14 188 chr20 1328398 1328840 -70825042 + MLT1A1 LTR MaLR 1 365 0 2537 253 114 39 chr20 1328840 1329157 -70824725 - L2 LINE L2 -820 2493 2201 2075 160 14 17 chr20 1329157 1329519 -70824363 - MLT1A1 LTR MaLR -4 361 1 2537 253 114 39 chr20 1329519 1329611 -70824271 - L2 LINE L2 -1112 2201 1899 296 238 111 63 chr20 1330071 1330197 -70823685 - L2 LINE L2 -13 3300 3169 1728 145 40 27 chr20 1330423 1330720 -70823162 - AluJo SINE Alu -11 301 1 868 181 192 25 chr20 1331041 1331317 -70822565 - MER5C DNA MER1_type -2 322 1 2162 125 0 0 chr20 1331450 1331745 -70822137 - AluSx SINE Alu -17 295 1 198 0 0 0 chr20 1331793 1331815 -70822067 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 193 288 123 34 chr20 1331888 1332034 -70821848 + L2 LINE L2 2606 2764 -550 449 291 37 10 chr20 1332212 1332373 -70821509 + MIR SINE MIR 17 176 -62 625 247 6 25 chr20 1332967 1333129 -70820753 + MIR SINE MIR 2 160 -102 324 255 27 107 chr20 1333544 1333693 -70820189 + MIR3 SINE MIR 69 205 -3 30 0 0 0 chr20 1334267 1334297 -70819585 + AT_rich Low_complexity Low_complexity 1 30 0 2120 134 0 10 chr20 1334491 1334805 -70819077 - AluSx SINE Alu -1 311 1 1745 187 81 49 chr20 1336279 1336749 -70817133 + MER66B LTR ERV1 1 485 -1 1855 174 0 0 chr20 1337913 1338211 -70815671 - AluJb SINE Alu -14 298 1 212 0 36 0 chr20 1338566 1338594 -70815288 + (TAAA)n Simple_repeat Simple_repeat 4 32 0 28 61 0 0 chr20 1340316 1340365 -70813517 + AT_rich Low_complexity Low_complexity 1 49 0 182 323 31 0 chr20 1343129 1343194 -70810688 + L3b LINE CR1 1294 1360 -223 249 33 0 0 chr20 1343725 1343755 -70810127 + (A)n Simple_repeat Simple_repeat 1 30 0 536 289 59 33 chr20 1344730 1345003 -70808879 - HAL1 LINE L1 -3 2504 2225 576 169 136 32 chr20 1345049 1345203 -70808679 - MLT1J LTR MaLR 0 511 342 624 226 167 0 chr20 1345260 1345446 -70808436 - MLT1J LTR MaLR -294 217 1 3205 34 0 0 chr20 1345541 1345924 -70807958 - L1PA5 LINE L1 -2 6152 5770 3481 37 103 0 chr20 1345937 1346393 -70807489 - L1PA5 LINE L1 0 6154 5652 990 252 62 127 chr20 1346520 1347171 -70806711 - HAL1 LINE L1 -568 1939 1293 337 216 0 14 chr20 1347171 1347245 -70806637 - AluJo SINE Alu -164 138 66 990 252 62 127 chr20 1347245 1347499 -70806383 - HAL1 LINE L1 -1214 1293 1024 22 0 0 0 chr20 1347499 1347521 -70806361 + AT_rich Low_complexity Low_complexity 1 22 0 560 213 24 18 chr20 1347529 1347542 -70806340 - L1MA10 LINE L1 -2 6332 6320 557 198 45 86 chr20 1347542 1347764 -70806118 - L1ME1 LINE L1 -5 6161 5949 857 316 47 26 chr20 1347879 1348345 -70805537 - HAL1 LINE L1 -1622 885 410 460 235 203 45 chr20 1348348 1348659 -70805223 - HAL1 LINE L1 -2136 371 12 2163 122 7 0 chr20 1348978 1349281 -70804601 - AluSx SINE Alu -7 305 1 808 173 8 8 chr20 1350349 1350482 -70803400 - FLAM_A SINE Alu 0 133 1 2323 220 44 8 chr20 1351271 1351884 -70801998 - L1ME1 LINE L1 -18 6542 5908 2025 154 68 0 chr20 1351896 1352278 -70801604 - L1MD2 LINE L1 -14 6345 5938 2785 151 37 11 chr20 1352278 1352394 -70801488 - L1MB7 LINE L1 -195 6369 6257 1959 115 0 11 chr20 1352394 1352664 -70801218 - AluSq SINE Alu -45 268 2 2785 151 37 11 chr20 1352664 1353175 -70800707 - L1MB7 LINE L1 -307 6257 4650 1952 213 92 14 chr20 1353179 1353896 -70799986 - L1MB7 LINE L1 -2391 4149 3377 226 194 32 16 chr20 1353897 1353959 -70799923 - L1MB7 LINE L1 -3101 3439 3377 250 253 25 13 chr20 1354008 1354087 -70799795 - L1MB7 LINE L1 -3086 3454 3375 243 247 26 13 chr20 1354134 1354211 -70799671 - L1MB7 LINE L1 -3086 3454 3377 229 260 26 13 chr20 1354386 1354463 -70799419 - L1MB7 LINE L1 -3086 3454 3377 238 234 26 13 chr20 1354583 1354660 -70799222 - L1MB7 LINE L1 -3097 3443 3366 250 253 25 13 chr20 1354761 1354840 -70799042 - L1MB7 LINE L1 -3086 3454 3375 229 260 26 13 chr20 1354824 1354901 -70798981 - L1MB7 LINE L1 -3086 3454 3377 * 238 234 26 13 chr20 1355020 1355097 -70798785 - L1MB7 LINE L1 -3097 3443 3366 243 247 26 13 chr20 1355198 1355275 -70798607 - L1MB7 LINE L1 -3086 3454 3377 243 247 26 13 chr20 1355261 1355338 -70798544 - L1MB7 LINE L1 -3086 3454 3377 * 244 247 26 13 chr20 1355324 1355401 -70798481 - L1MB7 LINE L1 -3086 3454 3377 227 212 30 15 chr20 1355461 1355527 -70798355 - L1MB7 LINE L1 -3097 3443 3377 227 212 30 15 chr20 1355524 1355590 -70798292 - L1MB7 LINE L1 -3097 3443 3377 * 234 221 29 15 chr20 1355587 1355655 -70798227 - L1MB7 LINE L1 -3097 3443 3375 244 217 29 14 chr20 1355960 1356029 -70797853 - L1MB7 LINE L1 -3096 3444 3375 225 260 26 13 chr20 1356013 1356090 -70797792 - L1MB7 LINE L1 -3086 3454 3377 * 887 232 67 20 chr20 1356087 1356384 -70797498 - L1MB7 LINE L1 -3097 3443 3133 2277 137 15 25 chr20 1356384 1356785 -70797097 - Tigger2a DNA MER2_type -36 398 2 2092 214 55 54 chr20 1356788 1357468 -70796414 - L1MB7 LINE L1 -3467 3073 2395 1765 170 6 46 chr20 1357468 1357791 -70796091 - AluSx SINE Alu -2 310 1 2092 214 55 54 chr20 1357791 1358412 -70795470 - L1MB7 LINE L1 -4145 2395 1773 1947 150 7 13 chr20 1358412 1358712 -70795170 - AluJo SINE Alu -14 298 1 2092 214 55 54 chr20 1358712 1358846 -70795036 - L1MB7 LINE L1 -4767 1773 1641 286 293 20 0 chr20 1359333 1359432 -70794450 - L1ME LINE L1 -5923 147 47 765 137 65 0 chr20 1359819 1359943 -70793939 + FLAM_C SINE Alu 1 132 -11 1616 230 180 5 chr20 1360674 1361190 -70792692 - L2 LINE L2 -2 3311 2711 300 356 34 25 chr20 1361248 1361366 -70792516 - MIR SINE MIR -72 136 18 383 205 0 0 chr20 1361655 1361733 -70792149 - MIR3 SINE MIR -50 158 81 261 301 75 68 chr20 1363175 1363321 -70790561 + MIR3 SINE MIR 17 163 -45 465 215 83 56 chr20 1363527 1363671 -70790211 + MIR SINE MIR 96 243 -19 209 270 101 11 chr20 1364322 1364411 -70789471 + L2 LINE L2 3212 3308 -5 215 288 0 17 chr20 1364518 1364577 -70789305 + (TTG)n Simple_repeat Simple_repeat 1 58 0 658 267 6 6 chr20 1364806 1364967 -70788915 + MIR3 SINE MIR 35 195 -13 336 273 118 0 chr20 1365068 1365178 -70788704 - MIR SINE MIR -112 150 28 388 308 70 27 chr20 1365466 1365651 -70788231 - MIR SINE MIR -11 251 59 252 306 107 8 chr20 1365655 1365776 -70788106 + MIR3 SINE MIR 12 144 -64 208 353 43 58 chr20 1365843 1365982 -70787900 - L2 LINE L2 0 3272 3136 21 0 0 0 chr20 1366152 1366173 -70787709 + AT_rich Low_complexity Low_complexity 1 21 0 218 211 19 39 chr20 1366471 1366523 -70787359 - MIR SINE MIR -77 131 81 546 243 95 6 chr20 1366823 1366992 -70786890 + MIR3 SINE MIR 4 187 -21 1958 137 0 0 chr20 1367014 1367291 -70786591 - AluSx SINE Alu -1 311 35 249 271 49 52 chr20 1367857 1368000 -70785882 + MIR SINE MIR 45 185 -35 578 254 123 17 chr20 1368080 1368316 -70785566 - Charlie8 DNA MER1_type -2154 263 3 181 333 16 16 chr20 1369040 1369103 -70784779 - L2 LINE L2 -5 3308 3246 237 188 0 21 chr20 1369127 1369175 -70784707 - L2 LINE L2 -3 3269 3223 234 293 49 12 chr20 1369319 1369401 -70784481 + MIR SINE MIR 152 236 -26 487 309 13 7 chr20 1369514 1369663 -70784219 - MIR SINE MIR -111 151 2 246 287 43 21 chr20 1369763 1369857 -70784025 - MIR SINE MIR -122 140 45 330 276 113 81 chr20 1369885 1370168 -70783714 + L3 LINE CR1 1236 1527 -50 298 301 98 0 chr20 1370841 1370964 -70782918 + MIR SINE MIR 36 170 -92 312 291 102 33 chr20 1371183 1371315 -70782567 - MIR SINE MIR -65 143 4 410 259 11 137 chr20 1372072 1372350 -70781532 + MIR SINE MIR 13 255 -7 385 294 26 46 chr20 1372425 1372578 -70781304 + L3 LINE CR1 1427 1576 -1 276 254 127 0 chr20 1372841 1372951 -70780931 + L2 LINE L2 3188 3311 -2 782 165 2 5 chr20 1373035 1373765 -70780117 + (TG)n Simple_repeat Simple_repeat 1 728 0 684 141 0 32 chr20 1373780 1373965 -70779917 + (TG)n Simple_repeat Simple_repeat 2 180 0 3049 212 67 28 chr20 1374060 1374359 -70779523 - L1ME1 LINE L1 -5 6161 5875 1692 102 0 4 chr20 1374359 1374594 -70779288 - AluSg/x SINE Alu -4 308 75 3049 212 67 28 chr20 1374594 1375208 -70778674 - L1ME1 LINE L1 -291 5875 5201 668 114 0 70 chr20 1375299 1375413 -70778469 - AluJb SINE Alu -8 304 199 196 300 0 0 chr20 1376081 1376141 -70777741 - L2 LINE L2 -285 2987 2928 360 257 48 53 chr20 1376209 1376377 -70777505 - MIR SINE MIR -62 146 3 253 380 44 19 chr20 1376798 1377069 -70776813 + L2 LINE L2 2444 2721 -593 565 298 133 14 chr20 1377807 1378086 -70775796 + L1ME4a LINE L1 5527 5838 -283 284 326 34 48 chr20 1378944 1379091 -70774791 + MIR3 SINE MIR 30 174 -34 529 259 89 49 chr20 1379151 1379375 -70774507 - Charlie8 DNA MER1_type -2184 233 1 1460 259 127 23 chr20 1380026 1380956 -70772926 - L2 LINE L2 -2 3311 2301 470 291 73 68 chr20 1381170 1381404 -70772478 - MIR SINE MIR 0 262 28 2333 82 16 0 chr20 1381498 1381803 -70772079 + AluSg SINE Alu 1 310 0 396 335 30 0 chr20 1383149 1383316 -70770566 + MIR3 SINE MIR 37 208 0 2138 122 0 3 chr20 1384293 1384605 -70769277 - AluSx SINE Alu -1 311 1 405 0 0 0 chr20 1385196 1385241 -70768641 + (CA)n Simple_repeat Simple_repeat 2 46 0 1320 169 73 15 chr20 1385251 1385523 -70768359 + AluJo SINE Alu 5 292 -20 3948 163 30 34 chr20 1385543 1385605 -70768277 - L1MB7 LINE L1 0 6184 6123 2024 116 0 26 chr20 1385605 1385908 -70767974 + AluSx SINE Alu 1 295 -17 3948 163 30 34 chr20 1385908 1386601 -70767281 - L1MB7 LINE L1 -61 6123 5432 196 195 24 0 chr20 1387584 1387625 -70766257 - MIR SINE MIR -57 151 110 254 246 35 0 chr20 1387684 1387741 -70766141 - MIR3 SINE MIR -6 202 144 310 350 148 7 chr20 1388146 1388429 -70765453 + L2 LINE L2 2540 2862 -452 668 246 24 43 chr20 1388668 1388904 -70764978 - MIR SINE MIR -18 244 15 186 231 15 46 chr20 1389801 1389866 -70764016 + MIR SINE MIR 34 96 -166 625 280 30 0 chr20 1390516 1390716 -70763166 + MIR SINE MIR 47 252 -10 281 256 112 8 chr20 1391684 1391809 -70762073 + MIR3 SINE MIR 65 202 -6 190 311 133 22 chr20 1392174 1392309 -70761573 + MIR SINE MIR 67 216 -46 354 211 26 0 chr20 1393052 1393128 -70760754 + MIR SINE MIR 77 154 -108 425 302 149 34 chr20 1393136 1393457 -70760425 - MLT1J LTR MaLR -32 479 122 260 264 69 0 chr20 1393488 1393560 -70760322 - MLT1L LTR MaLR -536 79 3 369 0 0 0 chr20 1394488 1394529 -70759353 + (TG)n Simple_repeat Simple_repeat 2 42 0 232 290 130 29 chr20 1395841 1395979 -70757903 + MIR SINE MIR 81 232 -30 883 194 5 5 chr20 1397196 1397382 -70756500 - L1MB7 LINE L1 0 6184 5999 286 212 12 12 chr20 1397431 1397516 -70756366 - L1MB7 LINE L1 -101 6083 5999 286 212 12 12 chr20 1397498 1397583 -70756299 - L1MB7 LINE L1 -101 6083 5999 286 212 12 12 chr20 1397565 1397650 -70756232 - L1MB7 LINE L1 -101 6083 5999 286 212 12 12 chr20 1397699 1397784 -70756098 - L1MB7 LINE L1 -101 6083 5999 286 224 12 12 chr20 1397766 1397851 -70756031 - L1MB7 LINE L1 -101 6083 5999 * 299 224 12 12 chr20 1397833 1397918 -70755964 - L1MB7 LINE L1 -101 6083 5999 * 301 212 12 12 chr20 1397900 1397985 -70755897 - L1MB7 LINE L1 -101 6083 5999 286 224 12 12 chr20 1397967 1398052 -70755830 - L1MB7 LINE L1 -101 6083 5999 * 301 212 12 12 chr20 1398034 1398119 -70755763 - L1MB7 LINE L1 -101 6083 5999 286 212 12 12 chr20 1398101 1398186 -70755696 - L1MB7 LINE L1 -101 6083 5999 * 286 212 12 12 chr20 1398168 1398253 -70755629 - L1MB7 LINE L1 -101 6083 5999 * 809 160 28 28 chr20 1398235 1398416 -70755466 - L1MB7 LINE L1 -101 6083 5903 365 292 65 13 chr20 1398836 1398990 -70754892 + L2 LINE L2 2866 3027 -245 241 163 0 20 chr20 1406423 1406472 -70747410 + G-rich Low_complexity Low_complexity 2 49 0 325 261 0 109 chr20 1407516 1407582 -70746300 - MIR SINE MIR -3 259 210 1855 147 13 7 chr20 1407582 1407881 -70746001 - AluJb SINE Alu -11 301 1 325 261 0 109 chr20 1407881 1407933 -70745949 - MIR SINE MIR -52 210 154 1124 241 20 3 chr20 1409587 1409890 -70743992 + L1MD2 LINE L1 4076 4383 -1763 1930 139 7 7 chr20 1409890 1410244 -70743638 + AluSx SINE Alu 1 354 0 829 144 0 8 chr20 1410293 1410425 -70743457 + FLAM_C SINE Alu 1 131 -2 2058 232 92 12 chr20 1410447 1410930 -70742952 + L1MD2 LINE L1 4387 4948 -1198 1809 149 3 0 chr20 1410930 1411243 -70742639 + AluSx SINE Alu 1 314 0 2058 232 92 12 chr20 1411243 1411479 -70742403 + L1MD2 LINE L1 4948 5164 -982 300 160 120 0 chr20 1411482 1411557 -70742325 + L1MD2 LINE L1 5204 5287 -859 1261 140 4 68 chr20 1411571 1411807 -70742075 + AluJb SINE Alu 85 305 -7 3849 180 44 21 chr20 1411808 1412081 -70741801 + L1MD2 LINE L1 5311 5576 -783 2052 128 0 0 chr20 1412081 1412370 -70741512 - AluJb SINE Alu -21 291 3 3849 180 44 21 chr20 1412370 1412909 -70740973 + L1MD2 LINE L1 5576 6142 -217 465 277 40 0 chr20 1412907 1413055 -70740827 + L1MD3 LINE L1 7832 7985 -10 * 21 0 0 0 chr20 1413066 1413087 -70740795 + AT_rich Low_complexity Low_complexity 1 21 0 1000 230 0 0 chr20 1414523 1414719 -70739163 + MLT1B LTR MaLR 191 386 -4 246 309 39 1 chr20 1415069 1415174 -70738708 - MIR SINE MIR -87 121 16 622 302 95 59 chr20 1417183 1417407 -70736475 + L2 LINE L2 2583 2798 -474 312 315 129 46 chr20 1417407 1417709 -70736173 + MER102a DNA MER1_type 1 327 -3 622 302 95 59 chr20 1417709 1418112 -70735770 + L2 LINE L2 2798 3234 -38 1876 162 3 0 chr20 1418251 1418553 -70735329 - AluJo SINE Alu -9 303 1 582 268 70 29 chr20 1418556 1418799 -70735083 + MER102a DNA MER1_type 59 311 -19 972 203 143 4 chr20 1419330 1419596 -70734286 + MER2 DNA MER2_type 43 345 0 204 185 148 0 chr20 1419667 1419721 -70734161 - L2 LINE L2 -1 3271 3210 287 293 61 100 chr20 1419754 1420034 -70733848 + L2 LINE L2 3004 3272 0 832 234 107 144 chr20 1420044 1420698 -70733184 + MER20B DNA MER1_type 32 661 -122 210 304 121 29 chr20 1421900 1422107 -70731775 + L2 LINE L2 2344 2569 -745 205 239 0 0 chr20 1422352 1422398 -70731484 - L2 LINE L2 -2 3311 3266 295 269 244 0 chr20 1422434 1422553 -70731329 + L2 LINE L2 3165 3312 -1 378 214 50 94 chr20 1423342 1423501 -70730381 + MIR SINE MIR 108 259 -3 755 300 79 30 chr20 1423502 1424094 -70729788 - L2 LINE L2 0 3313 2614 207 330 82 0 chr20 1424263 1424360 -70729522 - MIR SINE MIR -64 144 40 251 122 61 20 chr20 1425170 1425219 -70728663 + L1ME LINE L1 5599 5649 -472 234 257 171 19 chr20 1425458 1425563 -70728319 + L1ME4a LINE L1 5956 6076 -45 249 263 78 67 chr20 1426120 1426299 -70727583 - MIR SINE MIR -12 250 70 1768 183 0 0 chr20 1427177 1427466 -70726416 - AluJb SINE Alu -23 289 1 318 263 58 7 chr20 1427603 1427740 -70726142 - MER117 DNA MER1_type -49 148 5 334 158 149 79 chr20 1427740 1427825 -70726057 + L2 LINE L2 3151 3247 -25 1519 144 16 84 chr20 1427825 1428145 -70725737 - AluJb SINE Alu -14 298 1 334 158 149 79 chr20 1428145 1428173 -70725709 + L2 LINE L2 3247 3272 0 389 269 170 0 chr20 1428264 1428405 -70725477 + MIR SINE MIR 77 241 -21 213 276 52 0 chr20 1428627 1428685 -70725197 - L2 LINE L2 -16 3256 3196 310 193 0 0 chr20 1428854 1428911 -70724971 - MLT1J LTR MaLR -350 161 105 192 245 151 9 chr20 1428928 1429034 -70724848 + MIR3 SINE MIR 52 172 -36 1003 288 93 11 chr20 1429199 1429577 -70724305 - MLT1I LTR MaLR 0 409 1 736 212 74 5 chr20 1429771 1430057 -70723825 + MLT1A1 LTR MaLR 30 365 0 183 100 0 0 chr20 1430741 1430771 -70723111 + (CATGT)n Simple_repeat Simple_repeat 3 32 0 4335 94 3 24 chr20 1430850 1431236 -70722646 + L1PB2 LINE L1 5539 5909 -242 1919 82 0 16 chr20 1431236 1431491 -70722391 - AluSg SINE Alu 0 310 60 4335 94 3 24 chr20 1431491 1431729 -70722153 + L1PB2 LINE L1 5909 6150 -1 200 244 0 0 chr20 1431929 1431974 -70721908 - MIR SINE MIR -65 143 99 185 308 47 9 chr20 1432274 1432381 -70721501 + MIR3 SINE MIR 50 160 -48 560 228 71 3 chr20 1432966 1433151 -70720731 - MIR SINE MIR -7 255 11 219 296 9 70 chr20 1434070 1434185 -70719697 + MIR SINE MIR 22 129 -79 1079 283 106 31 chr20 1434384 1434896 -70718986 + MLT1K LTR MaLR 33 582 -6 1734 151 33 27 chr20 1434983 1435282 -70718600 - AluSx SINE Alu -11 301 1 700 75 32 0 chr20 1435639 1435733 -70718149 - AluS SINE Alu -214 98 2 1997 157 23 0 chr20 1436122 1436427 -70717455 - AluJo SINE Alu 0 312 1 1246 218 127 6 chr20 1436770 1437101 -70716781 - MER97b DNA MER1_type? -663 390 20 186 191 48 0 chr20 1437226 1437268 -70716614 + MIR SINE MIR 80 123 -139 231 36 0 0 chr20 1437830 1437858 -70716024 + (CA)n Simple_repeat Simple_repeat 1 28 0 190 231 115 0 chr20 1438521 1438573 -70715309 + L2 LINE L2 3189 3246 -67 2322 75 0 3 chr20 1438649 1438941 -70714941 + AluSq SINE Alu 1 291 -22 1978 164 0 0 chr20 1439006 1439310 -70714572 + AluJb SINE Alu 1 304 -8 202 231 0 0 chr20 1439375 1439414 -70714468 + MER91 DNA MER1_type 6 44 -96 3083 57 16 0 chr20 1439429 1439800 -70714082 - MER51B LTR ERV1 0 377 1 502 244 44 19 chr20 1439814 1439974 -70713908 + L1ME LINE L1 5566 5729 -392 30 27 0 0 chr20 1440304 1440341 -70713541 + AT_rich Low_complexity Low_complexity 1 37 0 1433 189 23 8 chr20 1440704 1440969 -70712913 + MLT1F LTR MaLR 1 269 -273 6034 194 40 17 chr20 1441102 1443507 -70710375 - L1MC2 LINE L1 -146 6592 4136 14842 143 43 42 chr20 1443517 1445605 -70708277 - L1MA3 LINE L1 -10 7714 5630 180 0 0 0 chr20 1445605 1445625 -70708257 + (TTTC)n Simple_repeat Simple_repeat 2 21 0 14842 143 43 42 chr20 1445625 1446008 -70707874 - L1MA3 LINE L1 -2094 5630 5249 1454 108 10 20 chr20 1446008 1446212 -70707670 - AluSq SINE Alu -24 289 88 14842 143 43 42 chr20 1446212 1447828 -70706054 - L1MA3 LINE L1 -2475 5249 3636 1196 55 0 22 chr20 1447828 1448010 -70705872 + (TTCC)n Simple_repeat Simple_repeat 3 180 0 1908 151 7 10 chr20 1448012 1448311 -70705571 - AluSx SINE Alu -14 298 1 14842 143 43 42 chr20 1448311 1448866 -70705016 - L1MA3 LINE L1 -4088 3636 3083 1646 179 29 0 chr20 1448866 1449146 -70704736 - AluJb SINE Alu -14 298 11 14842 143 43 42 chr20 1449146 1451453 -70702429 - L1MA3 LINE L1 -4641 3083 9 1057 244 7 21 chr20 1451452 1451731 -70702151 - L1MC2 LINE L1 -2391 4149 3875 * 1530 194 27 36 chr20 1451773 1452138 -70701744 - L1MC2 LINE L1 -3333 3207 2846 1088 209 24 91 chr20 1452165 1452539 -70701343 - L1MC2 LINE L1 -4887 1653 1305 1833 165 0 16 chr20 1452539 1452855 -70701027 + AluJb SINE Alu 1 311 -1 765 162 0 0 chr20 1452858 1452975 -70700907 + FLAM_C SINE Alu 2 118 -25 25 31 0 0 chr20 1452975 1453007 -70700875 + AT_rich Low_complexity Low_complexity 1 32 0 976 237 70 40 chr20 1453008 1453020 -70700862 - L1MC2 LINE L1 -5228 1315 1305 2433 90 3 3 chr20 1453020 1453330 -70700552 - AluSp SINE Alu -3 310 1 976 237 70 40 chr20 1453330 1453714 -70700168 - L1MC2 LINE L1 -5238 1305 907 257 269 21 32 chr20 1454140 1454233 -70699649 - L1MC2 LINE L1 -6098 442 351 681 67 0 0 chr20 1454242 1454332 -70699550 + AluSg/x SINE Alu 211 300 -9 990 278 24 7 chr20 1454347 1454642 -70699240 - L1MC2 LINE L1 -6207 333 34 1404 199 36 48 chr20 1454680 1454956 -70698926 - L1ME1 LINE L1 -6 6160 5887 2393 85 0 0 chr20 1454956 1455249 -70698633 + AluSc SINE Alu 1 293 -16 1404 199 36 48 chr20 1455249 1455328 -70698554 - L1ME1 LINE L1 -279 5887 5809 1500 170 8 133 chr20 1455989 1456365 -70697517 + MER7A DNA MER2_type 1 327 -19 688 137 103 57 chr20 1456728 1456903 -70696979 + Charlie1 DNA MER1_type 2382 2564 -197 1037 214 47 85 chr20 1456904 1457269 -70696613 + HAL1 LINE L1 1297 1647 -860 1125 237 21 21 chr20 1457282 1457565 -70696317 + MLT1H LTR MaLR 15 297 -252 201 162 0 0 chr20 1457885 1457922 -70695960 + A-rich Low_complexity Low_complexity 1 37 0 222 262 84 9 chr20 1458105 1458212 -70695670 + L2 LINE L2 2538 2652 -662 544 209 368 19 chr20 1458226 1458585 -70695297 - MLT1H1 LTR MaLR 0 555 72 841 128 8 0 chr20 1458667 1458784 -70695098 + AluJb SINE Alu 169 286 -26 193 296 37 46 chr20 1459034 1459142 -70694740 + L2 LINE L2 3160 3266 -47 4829 38 24 2 chr20 1460078 1460656 -70693226 + LTR10C LTR ERV1 1 591 0 291 218 100 45 chr20 1461034 1461144 -70692738 + MLT1L LTR MaLR 43 158 -457 1810 178 65 31 chr20 1461203 1461586 -70692296 - MSTD LTR MaLR 0 396 1 1170 224 50 37 chr20 1461963 1462346 -70691536 + LTR37A LTR ERV1 39 426 0 2230 99 3 0 chr20 1462654 1462947 -70690935 + AluY SINE Alu 4 297 -14 2231 162 84 41 chr20 1462955 1463418 -70690464 - MLT1D LTR MaLR 0 505 23 444 253 48 42 chr20 1463514 1463680 -70690202 + L1ME2 LINE L1 5897 6063 -101 208 196 22 0 chr20 1463775 1463821 -70690061 + (TAGA)n Simple_repeat Simple_repeat 4 50 0 23 78 0 0 chr20 1465346 1465397 -70688485 + AT_rich Low_complexity Low_complexity 1 51 0 762 198 17 17 chr20 1466054 1466226 -70687656 - MER5B DNA MER1_type 0 178 7 334 304 74 0 chr20 1466982 1467117 -70686765 + MIR3 SINE MIR 35 179 -29 1198 301 40 0 chr20 1470110 1470508 -70683374 + L1MC/D LINE L1 5405 5818 -1990 2162 111 0 0 chr20 1470519 1470798 -70683084 - AluSq SINE Alu -13 300 22 604 90 0 0 chr20 1470798 1470876 -70683006 - AluS SINE Alu -234 79 2 256 93 5 43 chr20 1472314 1472364 -70681518 - MIR SINE MIR -62 146 101 26 64 0 0 chr20 1472377 1472424 -70681458 + AT_rich Low_complexity Low_complexity 1 47 0 297 268 105 65 chr20 1473759 1473912 -70679970 + MLT1L LTR MaLR 240 398 -217 2450 133 13 5 chr20 1474005 1474388 -70679494 + L1MC1 LINE L1 5939 6324 -9 383 239 0 34 chr20 1474675 1474763 -70679119 + MER112 DNA MER1_type 168 252 -8 189 0 0 0 chr20 1475034 1475055 -70678827 + (CTG)n Simple_repeat Simple_repeat 1 21 0 231 272 61 35 chr20 1475785 1475899 -70677983 + L1MEc LINE L1 89 205 -6191 2650 217 43 2 chr20 1475917 1476520 -70677362 + L1MEc LINE L1 297 924 -5472 293 143 0 18 chr20 1476531 1476587 -70677295 + L1MEc LINE L1 1027 1081 -5315 * 2895 205 79 12 chr20 1476579 1477621 -70676261 + L1ME1 LINE L1 4916 6015 -151 1227 143 52 149 chr20 1479207 1479536 -70674346 + AluJo SINE Alu 1 297 -5 2034 113 3 3 chr20 1480790 1481090 -70672792 + AluSx SINE Alu 1 300 -12 1088 286 134 24 chr20 1481187 1481803 -70672079 + L2 LINE L2 2611 3304 -9 283 328 139 46 chr20 1482065 1482431 -70671451 - L2 LINE L2 -3 3269 2870 214 250 0 0 chr20 1482588 1482640 -70671242 + A-rich Low_complexity Low_complexity 4 55 0 273 62 42 0 chr20 1482852 1482900 -70670982 + L1MB8 LINE L1 6124 6173 -5 519 231 127 0 chr20 1482923 1483096 -70670786 + L1MC4 LINE L1 6741 7011 -827 1511 144 41 14 chr20 1483246 1483537 -70670345 + AluJb SINE Alu 1 299 -13 465 258 65 31 chr20 1483573 1483802 -70670080 + L1MC4 LINE L1 7112 7348 -694 304 248 155 8 chr20 1483937 1484066 -70669816 + L1MC4 LINE L1 7492 7639 -403 245 293 57 57 chr20 1484162 1484268 -70669614 - MIR SINE MIR -109 153 48 796 291 117 33 chr20 1484358 1484962 -70668920 + L2 LINE L2 2630 3302 -11 211 176 0 0 chr20 1486029 1486063 -70667819 + G-rich Low_complexity Low_complexity 1 34 0 231 218 0 0 chr20 1487413 1487468 -70666414 + GA-rich Low_complexity Low_complexity 3 57 0 201 283 33 0 chr20 1487768 1487828 -70666054 + MIR SINE MIR 128 189 -73 342 253 0 0 chr20 1488178 1488257 -70665625 + MIR SINE MIR 83 161 -101 604 320 48 69 chr20 1489241 1489259 -70664623 - L2 LINE L2 -13 3300 3283 2063 181 81 12 chr20 1489259 1489690 -70664192 + MER65C LTR ERV1 1 461 0 604 320 48 69 chr20 1489690 1490105 -70663777 - L2 LINE L2 -30 3283 2876 1926 138 37 45 chr20 1490138 1490178 -70663704 - THE1C LTR MaLR 0 375 336 2076 121 3 7 chr20 1490178 1490485 -70663397 + AluSx SINE Alu 1 306 -6 1926 138 37 45 chr20 1490485 1490822 -70663060 - THE1C LTR MaLR -39 336 1 282 181 181 43 chr20 1490827 1490921 -70662961 + MLT1G LTR MaLR 1 107 -483 1450 269 54 14 chr20 1490951 1491393 -70662489 - MLT1J LTR MaLR -30 481 22 1267 193 28 44 chr20 1492163 1492484 -70661398 - L1MDa LINE L1 -4865 1675 1360 2686 134 26 16 chr20 1492484 1492909 -70660973 + LTR3 LTR ERVK 1 429 -3 18221 87 44 16 chr20 1492918 1495506 -70658376 + HERVK3 LTR ERVK 2 2661 -4582 462 156 77 0 chr20 1495505 1495622 -70658260 + HERVK3 LTR ERVK 3536 5364 -581 * 2706 76 0 0 chr20 1495618 1495961 -70657921 + HERVK3 LTR ERVK 3965 4307 -2936 * 4695 109 9 0 chr20 1495960 1496628 -70657254 + HERVK3 LTR ERVK 4685 5358 -1885 * 7178 93 6 23 chr20 1496623 1496683 -70657199 + HERVK3 LTR ERVK 6264 6324 -919 2072 108 0 14 chr20 1496683 1497008 -70656874 - AluY SINE Alu 0 311 2 7178 93 6 23 chr20 1497008 1497942 -70655940 + HERVK3 LTR ERVK 6324 7241 -2 2716 144 7 21 chr20 1497943 1498374 -70655508 + LTR3 LTR ERVK 1 425 -7 280 211 9 37 chr20 1498387 1498496 -70655386 - L1MDa LINE L1 -5173 1367 1262 493 191 0 11 chr20 1498498 1498587 -70655295 + AluJ/FLAM SINE Alu 2 89 -223 354 253 13 0 chr20 1499036 1499115 -70654767 - L3 LINE CR1 -107 1470 1391 465 320 163 7 chr20 1499370 1499523 -70654359 + MLT1K LTR MaLR 45 221 -367 1906 176 19 48 chr20 1499523 1499756 -70654126 - MLT1A1 LTR MaLR 0 365 146 2149 83 14 0 chr20 1499756 1500046 -70653836 + AluSp SINE Alu 2 295 -18 1906 176 19 48 chr20 1500046 1500187 -70653695 - MLT1A1 LTR MaLR -219 146 2 435 178 32 189 chr20 1500231 1500417 -70653465 - MLT1A2 LTR MaLR -103 287 122 2089 110 7 0 chr20 1500417 1500718 -70653164 - AluSp SINE Alu -6 307 5 435 178 32 189 chr20 1500718 1500748 -70653134 - MLT1A2 LTR MaLR -268 122 89 2583 105 17 168 chr20 1500748 1501289 -70652593 - LTR32 LTR ERVL 0 471 13 513 189 33 0 chr20 1501287 1501377 -70652505 - MLT1A2 LTR MaLR -281 93 1 * 407 244 81 16 chr20 1501438 1501561 -70652321 + MLT1K LTR MaLR 456 586 -2 963 220 11 0 chr20 1501651 1501828 -70652054 - MER5A DNA MER1_type -4 185 7 223 254 164 0 chr20 1502057 1502124 -70651758 + L2 LINE L2 2740 2817 -497 359 311 92 0 chr20 1502625 1502744 -70651138 - MIR SINE MIR -49 213 84 1608 215 65 71 chr20 1502744 1503252 -70650630 + MLT1D LTR MaLR 1 505 0 1713 236 83 14 chr20 1503703 1504185 -70649697 - REP3 LTR ERV -47 515 1 324 0 0 0 chr20 1504264 1504300 -70649582 + (TG)n Simple_repeat Simple_repeat 2 37 0 1561 183 7 7 chr20 1504303 1504582 -70649300 - AluJb SINE Alu -33 279 1 1108 120 26 26 chr20 1504582 1504773 -70649109 - L1MB3 LINE L1 -40 6143 5953 444 277 177 17 chr20 1505231 1505550 -70648332 + MLT1J LTR MaLR 59 470 -41 208 219 24 0 chr20 1505584 1505625 -70648257 - MIR SINE MIR -139 69 28 221 380 23 8 chr20 1505746 1505875 -70648007 + L2 LINE L2 2582 2712 -602 882 121 109 6 chr20 1506030 1506195 -70647687 - L1M4 LINE L1 -550 5634 5453 292 319 11 0 chr20 1506195 1506286 -70647596 + MLT1L LTR MaLR 218 309 -306 3977 205 30 13 chr20 1506286 1506637 -70647245 + L1M4 LINE L1 3682 4026 -2120 1699 176 0 0 chr20 1506637 1506952 -70646930 + AluJb SINE Alu 1 315 0 3977 205 30 13 chr20 1506952 1507544 -70646338 + L1M4 LINE L1 4026 4642 -1504 757 315 13 4 chr20 1507544 1507782 -70646100 + MER76 LTR ERV 415 654 -34 6903 236 50 28 chr20 1507797 1509066 -70644816 + L1MD2 LINE L1 2160 3399 -2960 2120 103 14 0 chr20 1509066 1509358 -70644524 + AluSx SINE Alu 1 296 -16 6903 236 50 28 chr20 1509358 1511400 -70642482 + L1MD2 LINE L1 3399 6358 -1 280 250 26 0 chr20 1511483 1511559 -70642323 - L2 LINE L2 -741 2573 2496 356 299 212 11 chr20 1511583 1511956 -70641926 + L2 LINE L2 2622 3069 -203 818 273 82 75 chr20 1512067 1512587 -70641295 + L2 LINE L2 2746 3270 -2 527 285 61 6 chr20 1512702 1512867 -70641015 - MIR SINE MIR -70 192 19 298 295 29 9 chr20 1513026 1513131 -70640751 - MIR SINE MIR -73 135 29 310 264 47 19 chr20 1513620 1513726 -70640156 - MIR SINE MIR -84 124 16 956 216 118 146 chr20 1513937 1514498 -70639384 + MLT1K LTR MaLR 35 579 -9 408 322 159 15 chr20 1514605 1515050 -70638832 - L2 LINE L2 -5 3308 2785 3662 111 26 76 chr20 1515123 1515781 -70638101 - L1PA16 LINE L1 -4 6162 5538 2567 168 13 13 chr20 1515866 1516589 -70637293 - L1PA16 LINE L1 -634 5532 4809 890 269 112 30 chr20 1516589 1516990 -70636892 + MLT1J LTR MaLR 59 492 -19 206 222 22 0 chr20 1516993 1517038 -70636844 - L2 LINE L2 -1092 2222 2177 1841 194 58 47 chr20 1517039 1517554 -70636328 + Charlie1b DNA MER1_type 1 521 -2 658 224 33 13 chr20 1518133 1518285 -70635597 - MIR SINE MIR -57 205 51 473 210 60 0 chr20 1518373 1518473 -70635409 - L2 LINE L2 -11 3302 3197 * 907 285 111 18 chr20 1518450 1518839 -70635043 + L2 LINE L2 2889 3313 0 601 236 155 10 chr20 1518978 1519244 -70634638 - L2 LINE L2 -275 2997 2700 717 191 212 7 chr20 1519595 1519813 -70634069 + MER66A LTR ERV1 97 249 -229 895 152 34 22 chr20 1519830 1520008 -70633874 + L1MA9 LINE L1 6133 6312 0 2547 159 18 8 chr20 1520014 1520615 -70633267 - L1MB7 LINE L1 -35 6149 5417 1125 128 0 0 chr20 1520629 1520793 -70633089 + AluSg/x SINE Alu 132 295 -17 696 309 63 19 chr20 1521013 1521330 -70632552 + L2 LINE L2 2839 3169 -144 663 276 122 5 chr20 1521331 1521449 -70632433 + MER8 DNA MER2_type 1 104 -135 1040 173 0 12 chr20 1521449 1521617 -70632265 - FRAM SINE Alu 0 166 1 663 276 122 5 chr20 1521617 1521712 -70632170 + MER8 DNA MER2_type 104 239 0 421 295 124 0 chr20 1521712 1521841 -70632041 + L2 LINE L2 3169 3313 0 455 223 32 0 chr20 1521845 1521939 -70631943 - MIR SINE MIR -70 138 42 198 303 98 25 chr20 1522199 1522321 -70631561 + L3 LINE CR1 1335 1465 -112 334 269 17 17 chr20 1522777 1522896 -70630986 + L1MC/D LINE L1 5313 5431 -2377 338 314 99 42 chr20 1522914 1523197 -70630685 + L1MDa LINE L1 27 325 -6215 925 261 18 65 chr20 1523720 1524061 -70629821 + L1MDa LINE L1 926 1250 -5293 1415 170 63 7 chr20 1524071 1524087 -70629795 - L1MB5 LINE L1 -4 6170 6156 2169 91 0 3 chr20 1524087 1524383 -70629499 + AluSg SINE Alu 1 295 -15 1415 170 63 7 chr20 1524383 1524666 -70629216 - L1MB5 LINE L1 -18 6156 5854 1186 209 129 112 chr20 1524752 1525204 -70628678 - MER77 LTR ERV1 -7 598 134 1430 157 44 27 chr20 1525348 1525557 -70628325 - L1MB5 LINE L1 -315 5859 5642 2531 219 20 34 chr20 1525557 1526119 -70627763 + MLT2B3 LTR ERVL 1 554 0 1430 157 44 27 chr20 1526119 1526203 -70627679 - L1MB5 LINE L1 -532 5642 5561 6119 194 57 44 chr20 1526868 1528779 -70625103 - L1MB5 LINE L1 -591 5583 3633 3184 219 38 60 chr20 1528834 1528915 -70624967 + L1MD2 LINE L1 5255 5336 -1023 2295 84 0 0 chr20 1528915 1529214 -70624668 - AluY SINE Alu -12 299 1 3184 219 38 60 chr20 1529214 1529557 -70624325 + L1MD2 LINE L1 5336 5685 -674 3535 124 13 19 chr20 1529557 1530087 -70623795 + MER1A DNA MER1_type 1 527 0 3184 219 38 60 chr20 1530087 1530572 -70623310 + L1MD2 LINE L1 5685 6145 -214 895 193 164 81 chr20 1530700 1531147 -70622735 + MER66A LTR ERV1 97 478 0 458 288 8 0 chr20 1531158 1531276 -70622606 - MIR SINE MIR -115 147 29 2165 122 0 3 chr20 1532240 1532551 -70621331 + AluSx SINE Alu 2 311 -1 489 277 79 17 chr20 1532584 1532761 -70621121 + MIR SINE MIR 71 258 -4 2000 124 0 0 chr20 1532762 1533086 -70620796 + AluSx SINE Alu 1 324 0 376 224 103 17 chr20 1533093 1533209 -70620673 + L1MC/D LINE L1 5415 5540 -2268 287 220 202 0 chr20 1533220 1533329 -70620553 + L1MC/D LINE L1 5622 5752 -2056 717 185 151 5 chr20 1533425 1533630 -70620252 - HsTC2 DNA Tc2 -7 1891 1657 296 213 38 25 chr20 1533637 1533717 -70620165 - MER104 DNA Tc2 -89 91 11 182 224 118 40 chr20 1534802 1534878 -70619004 + MIR SINE MIR 34 115 -147 458 224 69 9 chr20 1534939 1535055 -70618827 + MIR SINE MIR 119 241 -21 506 288 114 50 chr20 1535074 1535293 -70618589 - MIR SINE MIR -12 250 18 304 302 236 5 chr20 1535447 1535659 -70618223 + MIR SINE MIR 2 262 0 604 291 64 9 chr20 1535999 1536219 -70617663 - L2 LINE L2 -5 3308 3077 307 327 193 15 chr20 1539679 1540121 -70613761 + L2 LINE L2 2656 3200 -72 270 216 0 0 chr20 1540777 1540828 -70613054 + MIR SINE MIR 99 149 -59 387 289 83 0 chr20 1541090 1541211 -70612671 - MIR3 SINE MIR -52 156 26 309 280 60 10 chr20 1541589 1541689 -70612193 - L2 LINE L2 -21 3251 3147 182 308 0 0 chr20 1541756 1541808 -70612074 + MIR SINE MIR 92 143 -119 183 311 67 37 chr20 1542372 1542507 -70611375 + L2 LINE L2 1295 1433 -1881 1424 113 43 43 chr20 1543007 1543237 -70610645 - MER30 DNA MER1_type 0 230 1 344 252 110 24 chr20 1543478 1543605 -70610277 - MIR SINE MIR -11 251 114 372 259 16 0 chr20 1543764 1543853 -70610029 + MIR SINE MIR 58 148 -62 383 291 50 27 chr20 1543931 1544107 -70609775 + MIR SINE MIR 18 208 -54 746 263 65 35 chr20 1544319 1544551 -70609331 - MIR SINE MIR -13 249 11 180 287 244 43 chr20 1544807 1544922 -70608960 + MIR SINE MIR 107 244 -18 307 122 0 0 chr20 1545663 1545712 -70608170 + U5 snRNA snRNA 1 49 -67 366 277 203 16 chr20 1546328 1546644 -70607238 + L1ME4a LINE L1 5531 5905 -216 292 316 64 0 chr20 1547145 1547266 -70606616 + MIR SINE MIR 25 151 -62 654 230 163 15 chr20 1547835 1548031 -70605851 - MIR SINE MIR -17 245 21 349 322 27 4 chr20 1549006 1549119 -70604763 + MIR SINE MIR 2 109 -103 475 292 63 63 chr20 1550141 1550473 -70603409 - MER102b DNA MER1_type -9 332 1 408 336 112 8 chr20 1550871 1551139 -70602743 - L2 LINE L2 -37 3235 2940 182 250 23 0 chr20 1551140 1551184 -70602698 - L2 LINE L2 -1042 2272 2228 346 258 111 79 chr20 1551283 1551473 -70602409 + MIR3 SINE MIR 48 243 -19 581 227 45 0 chr20 1552391 1552545 -70601337 + L1ME4a LINE L1 5589 5749 -372 275 241 134 36 chr20 1552649 1552761 -70601121 + L1ME4a LINE L1 5953 6075 -46 333 313 20 10 chr20 1552888 1552987 -70600895 + L1ME4a LINE L1 5964 6063 -58 2830 176 50 29 chr20 1552990 1553644 -70600238 - L1MA7 LINE L1 -4 6287 5620 1913 148 172 8 chr20 1554833 1555199 -70598683 + MSTA LTR MaLR 1 426 -2 441 299 72 24 chr20 1555708 1555915 -70597967 + MIR SINE MIR 25 241 -21 755 261 22 0 chr20 1555925 1556109 -70597773 + MER5A DNA MER1_type 2 189 0 747 177 165 6 chr20 1556334 1556498 -70597384 + MER3 DNA MER1_type 19 208 -1 219 324 67 9 chr20 1556704 1556809 -70597073 + MIR SINE MIR 95 205 -57 578 171 85 136 chr20 1557380 1557579 -70596303 + MIR SINE MIR 74 262 0 2324 83 0 6 chr20 1558193 1558506 -70595376 - AluY SINE Alu 0 311 1 905 177 66 25 chr20 1558624 1558822 -70595060 - MIR SINE MIR -44 218 13 703 274 68 13 chr20 1560384 1560621 -70593261 - MIR SINE MIR 0 262 13 235 340 85 39 chr20 1560850 1561003 -70592879 - L2 LINE L2 -13 3259 3100 193 185 123 31 chr20 1561069 1561134 -70592748 + MIR3 SINE MIR 95 165 -43 647 244 93 6 chr20 1561275 1561447 -70592435 + MIR SINE MIR 32 218 -44 610 231 208 46 chr20 1561445 1561661 -70592221 + MIR SINE MIR 10 260 -2 * 472 216 88 0 chr20 1561707 1561809 -70592073 - L2 LINE L2 -4 3309 3199 451 258 50 0 chr20 1562866 1562986 -70590896 - L2 LINE L2 0 3313 3188 499 272 65 22 chr20 1563014 1563314 -70590568 + L2 LINE L2 2727 3039 -274 2045 237 16 19 chr20 1563357 1563843 -70590039 + LTR10B LTR ERV1 21 505 0 290 310 23 0 chr20 1563849 1563936 -70589946 + L2 LINE L2 2959 3047 -225 865 267 85 12 chr20 1563965 1564295 -70589587 - MER20B DNA MER1_type -393 390 37 478 251 75 43 chr20 1564568 1564768 -70589114 - MIR SINE MIR -6 256 1 286 303 20 13 chr20 1564975 1565127 -70588755 + C-rich Low_complexity Low_complexity 1 153 0 200 309 37 44 chr20 1565139 1565275 -70588607 + C-rich Low_complexity Low_complexity 3 137 0 256 119 0 0 chr20 1565572 1565614 -70588268 + Alu SINE Alu 259 300 -2 230 225 56 14 chr20 1565753 1565824 -70588058 + L1ME3A LINE L1 5411 5484 -2324 346 186 14 0 chr20 1565824 1565894 -70587988 + LTR60 LTR ERV1 1 71 -515 960 247 44 76 chr20 1566028 1566108 -70587774 + LTR43 LTR ERV1 131 212 -492 2119 117 0 7 chr20 1566108 1566416 -70587466 + AluSg SINE Alu 1 306 -4 960 247 44 76 chr20 1566416 1566811 -70587071 + LTR43 LTR ERV1 212 684 -20 403 292 100 26 chr20 1566824 1567216 -70586666 + L1ME3A LINE L1 5484 5909 -280 579 286 150 18 chr20 1568248 1568475 -70585407 - MIR SINE MIR 0 262 6 927 290 62 31 chr20 1568531 1568917 -70584965 + L2 LINE L2 2892 3289 -24 245 254 127 0 chr20 1568942 1569013 -70584869 - L2 LINE L2 -65 3248 3169 599 216 6 0 chr20 1569027 1569189 -70584693 + (CA)n Simple_repeat Simple_repeat 2 164 0 439 257 104 50 chr20 1569194 1569442 -70584440 - L2 LINE L2 -167 3146 2794 1478 211 109 93 chr20 1569512 1570006 -70583876 - MLT1D LTR MaLR 0 505 4 191 167 83 67 chr20 1570184 1570244 -70583638 + MIR SINE MIR 190 250 -12 2218 90 3 3 chr20 1570258 1570557 -70583325 - AluSq SINE Alu -14 299 1 533 172 60 26 chr20 1570727 1570843 -70583039 - MER20 DNA MER1_type -99 120 1 807 280 64 15 chr20 1570956 1571220 -70582662 + MLT1J LTR MaLR 1 277 -234 348 306 116 7 chr20 1572266 1572413 -70581469 - MIR SINE MIR -65 197 35 350 268 121 56 chr20 1572514 1572712 -70581170 - MIR SINE MIR -31 231 21 258 242 145 73 chr20 1572756 1572880 -70581002 - L3 LINE CR1 -130 1447 1315 346 297 55 0 chr20 1573262 1573353 -70580529 + L2 LINE L2 3169 3264 -8 1992 115 7 0 chr20 1573370 1573657 -70580225 - AluSq SINE Alu -24 289 1 532 272 54 16 chr20 1573697 1573881 -70580001 - L2 LINE L2 -182 3090 2900 208 304 0 39 chr20 1574320 1574422 -70579460 + CT-rich Low_complexity Low_complexity 3 100 0 306 226 154 81 chr20 1574434 1574655 -70579227 - L2 LINE L2 -1 3271 3035 281 372 26 19 chr20 1574725 1574881 -70579001 - MIR SINE MIR -59 203 47 503 265 126 47 chr20 1574990 1575307 -70578575 + MLT1I LTR MaLR 39 380 -29 525 308 110 22 chr20 1575950 1576105 -70577777 - MIR SINE MIR 0 262 79 2300 160 18 5 chr20 1576105 1576488 -70577394 + MLT1B LTR MaLR 3 390 0 525 308 110 22 chr20 1576488 1576559 -70577323 - MIR SINE MIR -183 79 16 224 319 0 0 chr20 1576769 1576841 -70577041 - MIR SINE MIR -59 203 132 911 111 7 22 chr20 1576864 1576999 -70576883 - AluJo/FLAM SINE Alu -169 133 1 250 273 53 68 chr20 1576999 1577131 -70576751 - MIR SINE MIR -111 151 22 465 236 149 6 chr20 1577587 1577748 -70576134 + L1ME1 LINE L1 506 689 -5707 430 226 0 17 chr20 1577757 1577872 -70576010 + L1ME1 LINE L1 1874 1986 -4410 1653 122 86 16 chr20 1577880 1578183 -70575699 - L1MA4A LINE L1 -102 6903 6580 648 158 0 0 chr20 1578183 1578297 -70575585 + CT-rich Low_complexity Low_complexity 3 116 0 637 108 0 0 chr20 1578298 1578381 -70575501 - AluSg/x SINE Alu -59 251 169 3701 123 19 57 chr20 1578383 1578792 -70575090 - L1MA4A LINE L1 -417 6588 6165 2202 121 0 0 chr20 1578792 1579090 -70574792 - AluSx SINE Alu -14 298 1 3701 123 19 57 chr20 1579090 1579656 -70574226 - L1MA4A LINE L1 -840 6165 1728 2984 134 30 44 chr20 1579703 1580565 -70573317 + L1MA4A LINE L1 4795 5643 -660 3254 136 12 4 chr20 1580572 1581078 -70572804 + L1MA4A LINE L1 5794 6303 0 7571 222 65 35 chr20 1581078 1581315 -70572567 + L1ME1 LINE L1 2985 3214 -3021 338 0 24 0 chr20 1581315 1581357 -70572525 + (CA)n Simple_repeat Simple_repeat 2 44 0 7571 222 65 35 chr20 1581357 1581745 -70572137 + L1ME1 LINE L1 3214 3589 -2646 2223 138 0 0 chr20 1581745 1582056 -70571826 - AluSx SINE Alu -1 311 1 7571 222 65 35 chr20 1582056 1583324 -70570558 + L1ME1 LINE L1 3589 4818 -1417 732 178 99 40 chr20 1583324 1583476 -70570406 - FAM SINE Alu -10 165 5 7571 222 65 35 chr20 1583476 1584045 -70569837 + L1ME1 LINE L1 4818 5369 -866 1609 138 0 94 chr20 1584045 1584343 -70569539 + AluJb SINE Alu 25 294 -18 7571 222 65 35 chr20 1584343 1585056 -70568826 + L1ME1 LINE L1 5369 6230 -5 228 250 69 14 chr20 1585418 1585490 -70568392 + MIR SINE MIR 117 192 -70 842 190 80 0 chr20 1585510 1585673 -70568209 - MER45A DNA AcHobo -2 176 1 229 269 19 0 chr20 1585807 1585859 -70568023 + L2 LINE L2 3214 3266 -6 * 234 326 204 8 chr20 1585851 1585983 -70567899 - MIR SINE MIR -28 180 23 421 257 135 14 chr20 1586234 1586382 -70567500 - MIR SINE MIR 0 262 97 868 172 86 6 chr20 1586429 1586592 -70567290 + MER45A DNA AcHobo 1 176 -2 254 300 12 0 chr20 1586616 1586696 -70567186 - MIR SINE MIR -73 189 109 305 333 51 31 chr20 1587329 1587524 -70566358 + MIR SINE MIR 23 221 -41 614 213 16 8 chr20 1587863 1587985 -70565897 + MIR SINE MIR 31 153 -109 1716 234 122 30 chr20 1588554 1589055 -70564827 - MLT1H LTR MaLR 0 549 3 794 175 115 65 chr20 1590639 1590856 -70563026 - L1ME2 LINE L1 -2 6162 5935 * 9231 173 8 3 chr20 1590838 1591948 -70561934 - L1 LINE L1 -1872 5693 4428 2355 94 0 0 chr20 1591948 1592246 -70561636 - AluSx SINE Alu -14 298 1 9231 173 8 3 chr20 1592246 1593051 -70560831 - L1 LINE L1 -3137 4428 3629 1290 117 0 0 chr20 1593051 1593230 -70560652 - AluSg/x SINE Alu 0 310 132 267 158 0 0 chr20 1593230 1593268 -70560614 - Alu SINE Alu -263 39 2 21280 144 27 22 chr20 1593276 1596150 -70557732 - L1 LINE L1 -3933 3632 736 3546 118 28 2 chr20 1596150 1596650 -70557232 + LTR10D LTR ERV1 1 513 0 21280 144 27 22 chr20 1596650 1597370 -70556512 - L1 LINE L1 -6829 736 21 282 206 82 123 chr20 1597368 1597611 -70556271 - L1M4c LINE L1 -3938 2446 2214 * 362 217 60 0 chr20 1597673 1597756 -70556126 - Tigger5 DNA MER2_type -2235 88 1 * 427 210 148 37 chr20 1597756 1597851 -70556031 + Tigger5 DNA MER2_type 2208 2320 -3 1528 230 70 23 chr20 1597854 1598505 -70555377 - L1M4c LINE L1 -4169 2215 1454 790 174 0 0 chr20 1598506 1598621 -70555261 - FRAM SINE Alu -20 156 42 1862 290 25 37 chr20 1598627 1599411 -70554471 - L1M2c LINE L1 -4516 1385 663 314 338 40 18 chr20 1599613 1599814 -70554068 - L1M2c LINE L1 -5189 702 237 207 0 0 0 chr20 1600461 1600484 -70553398 + (TG)n Simple_repeat Simple_repeat 1 23 0 * 303 28 0 0 chr20 1600483 1600519 -70553363 + (GA)n Simple_repeat Simple_repeat 1 36 0 198 320 16 57 chr20 1600586 1600708 -70553174 + MIR3 SINE MIR 15 131 -77 1661 248 84 50 chr20 1601736 1602614 -70551268 - L2 LINE L2 -4 3309 2118 831 273 29 12 chr20 1602560 1602802 -70551080 + MIR SINE MIR 12 257 -5 * 1999 212 111 24 chr20 1602920 1602974 -70550908 - L1MC4 LINE L1 -143 7899 7851 1825 163 18 92 chr20 1602974 1603367 -70550515 + MLT1A1 LTR MaLR 2 365 0 1999 212 111 24 chr20 1603367 1603860 -70550022 - L1MC4 LINE L1 -191 7851 7304 355 254 103 30 chr20 1604314 1604479 -70549403 + MLT1L LTR MaLR 3 179 -436 209 83 28 0 chr20 1604583 1604619 -70549263 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 251 218 0 0 chr20 1604956 1605011 -70548871 - L1MA9 LINE L1 -1 6311 6257 335 95 0 149 chr20 1605932 1606006 -70547876 + L1PA10 LINE L1 6106 6168 0 213 333 8 83 chr20 1606069 1606201 -70547681 + MIR3 SINE MIR 81 202 -6 891 294 74 98 chr20 1606683 1607793 -70546089 + L2 LINE L2 2227 3312 -1 1143 211 28 66 chr20 1608094 1608383 -70545499 - AluJb SINE Alu -25 287 10 425 271 98 0 chr20 1608556 1608587 -70545295 - MER96 DNA MER1_type? -29 146 119 2865 96 11 16 chr20 1608587 1608964 -70544918 - THE1C LTR MaLR 0 375 1 425 271 98 0 chr20 1608964 1609065 -70544817 - MER96 DNA MER1_type? -56 119 1 391 269 221 6 chr20 1609601 1609809 -70544073 + MIR SINE MIR 3 252 -10 202 292 15 15 chr20 1609821 1609886 -70543996 - MIR3 SINE MIR -5 203 139 402 147 0 0 chr20 1610034 1610102 -70543780 + (TCCA)n Simple_repeat Simple_repeat 3 70 0 1332 302 68 0 chr20 1610473 1610956 -70542926 - L1ME3A LINE L1 -295 5875 5350 345 226 69 20 chr20 1611947 1612049 -70541833 + MIR SINE MIR 86 192 -70 435 269 87 13 chr20 1612248 1612397 -70541485 - MIR SINE MIR -97 165 6 401 333 45 50 chr20 1612802 1613024 -70540858 - L2 LINE L2 -42 3230 3010 990 256 190 27 chr20 1613086 1613339 -70540543 + MLT1G1 LTR MaLR 1 212 -378 3131 198 20 0 chr20 1613339 1613885 -70539997 + MER41D LTR ERV1 1 557 0 990 256 190 27 chr20 1613885 1614093 -70539789 + MLT1G1 LTR MaLR 212 521 -69 981 244 92 7 chr20 1614383 1614686 -70539196 + Charlie2 DNA MER1_type 31 359 -2423 1480 216 98 65 chr20 1614692 1615303 -70538579 + Charlie2 DNA MER1_type 2230 2860 -2 655 255 143 50 chr20 1615317 1615701 -70538181 - L2 LINE L2 -526 2788 2369 515 158 42 11 chr20 1615856 1615951 -70537931 + MIR SINE MIR 49 146 -62 1032 315 77 12 chr20 1616545 1617024 -70536858 + L2 LINE L2 2804 3313 0 260 386 31 6 chr20 1617719 1617882 -70536000 + L2 LINE L2 2595 2761 -553 1132 242 52 67 chr20 1617897 1618344 -70535538 - HAL1 LINE L1 -25 2482 2043 1526 122 29 29 chr20 1618357 1618635 -70535247 - L1MA1 LINE L1 0 6302 6025 1669 191 22 38 chr20 1618902 1619268 -70534614 - L1MA9 LINE L1 -38 6274 5915 * 1758 183 3 30 chr20 1619267 1619605 -70534277 + L1MA9 LINE L1 5594 5922 -390 995 242 34 18 chr20 1619565 1619892 -70533990 - L1MC5 LINE L1 -178 7783 7452 * 386 241 23 0 chr20 1619929 1620016 -70533866 + LTR16C LTR ERVL 282 370 -121 23 0 0 0 chr20 1620209 1620232 -70533650 + AT_rich Low_complexity Low_complexity 1 23 0 2499 40 0 10 chr20 1620387 1620683 -70533199 + AluY SINE Alu 1 293 -18 477 0 0 0 chr20 1620683 1620736 -70533146 + (CA)n Simple_repeat Simple_repeat 2 54 0 1804 277 95 8 chr20 1620766 1621395 -70532487 - L1MC4a LINE L1 -1866 6011 5328 740 219 10 86 chr20 1621561 1621853 -70532029 - L1MC4a LINE L1 -1094 5121 4852 25 0 0 0 chr20 1621860 1621885 -70531997 + AT_rich Low_complexity Low_complexity 1 25 0 1336 27 0 0 chr20 1621885 1622033 -70531849 - L1PA4 LINE L1 -3 6152 6005 317 158 18 0 chr20 1622037 1622094 -70531788 - L1MC4a LINE L1 -1353 4862 4805 4500 233 61 45 chr20 1622096 1622837 -70531045 - L1MEc LINE L1 -2426 3789 3061 1895 154 0 3 chr20 1622837 1623122 -70530760 + AluJb SINE Alu 1 284 -28 180 97 0 0 chr20 1623122 1623153 -70530729 + (CATA)n Simple_repeat Simple_repeat 2 32 0 4500 233 61 45 chr20 1623153 1624561 -70529321 - L1MEc LINE L1 -3153 3062 1639 656 108 30 175 chr20 1624571 1624737 -70529145 - L1MB3 LINE L1 -7 6176 6035 575 202 29 0 chr20 1624740 1624844 -70529038 - U6 snRNA snRNA 0 107 1 239 176 39 0 chr20 1624847 1624898 -70528984 + Alu SINE Alu 246 298 -2 3945 251 71 56 chr20 1624901 1625002 -70528880 - L1MEc LINE L1 -1710 4505 4407 2217 123 0 0 chr20 1625002 1625303 -70528579 + AluSq SINE Alu 1 301 -12 3945 251 71 56 chr20 1625303 1625623 -70528259 - L1MEc LINE L1 -1808 4407 4093 2381 70 0 10 chr20 1625623 1625923 -70527959 - AluY SINE Alu -14 297 1 3945 251 71 56 chr20 1625923 1627407 -70526475 - L1MEc LINE L1 -2122 4093 11 283 353 8 16 chr20 1627425 1627547 -70526335 - HAL1 LINE L1 -569 1938 1818 417 287 27 27 chr20 1627656 1627844 -70526038 - HAL1 LINE L1 -900 1607 1420 615 219 7 171 chr20 1628332 1628515 -70525367 - MIR SINE MIR -26 236 111 1907 138 10 17 chr20 1628515 1628811 -70525071 + AluSx SINE Alu 1 294 -18 615 219 7 171 chr20 1628811 1628901 -70524981 - MIR SINE MIR -151 111 8 23 0 0 0 chr20 1630135 1630158 -70523724 + AT_rich Low_complexity Low_complexity 1 23 0 406 277 7 29 chr20 1630185 1630325 -70523557 + L1ME4a LINE L1 5437 5576 -545 522 256 47 33 chr20 1630574 1630789 -70523093 + L1ME4a LINE L1 5609 5826 -295 233 305 44 66 chr20 1630940 1631018 -70522864 + MIR SINE MIR 2 80 -182 2458 142 66 22 chr20 1631018 1631428 -70522454 + MSTC LTR MaLR 1 428 0 233 305 44 66 chr20 1631428 1631575 -70522307 + MIR SINE MIR 80 222 -40 666 280 0 66 chr20 1631889 1632132 -70521750 - MIR SINE MIR -29 233 7 254 28 0 28 chr20 1632355 1632391 -70521491 + (TCTA)n Simple_repeat Simple_repeat 4 38 0 1598 247 104 41 chr20 1634113 1634668 -70519214 + MLT1G1 LTR MaLR 3 592 -3 1304 286 46 8 chr20 1634722 1635243 -70518639 - L1M4 LINE L1 -3049 3097 2557 1835 226 85 20 chr20 1635249 1635765 -70518117 + MLT1F1 LTR MaLR 1 567 0 777 250 48 20 chr20 1635795 1636043 -70517839 + MLT1D LTR MaLR 207 461 -44 925 185 20 89 chr20 1636043 1636335 -70517547 - L1MB8 LINE L1 -13 6976 6705 * 31144 101 9 10 chr20 1636329 1642024 -70511858 - L1PA7 LINE L1 -4 6465 748 5495 205 58 34 chr20 1642024 1643111 -70510771 - L1MB8 LINE L1 -276 6719 5660 836 161 0 0 chr20 1643111 1643241 -70510641 - FLAM_C SINE Alu -3 130 1 5495 205 58 34 chr20 1643241 1644541 -70509341 - L1MB8 LINE L1 -1335 5660 4055 1531 229 48 66 chr20 1644560 1645290 -70508592 - L1MB8 LINE L1 -4936 1919 1203 682 246 126 0 chr20 1645291 1645482 -70508400 - L1MB8 LINE L1 -6629 230 16 293 227 0 0 chr20 1645495 1645561 -70508321 + MLT1D LTR MaLR 440 505 0 193 208 56 69 chr20 1645809 1645881 -70508001 + MIR3 SINE MIR 87 157 -51 224 264 240 23 chr20 1646445 1646574 -70507308 + MIR SINE MIR 106 262 0 195 328 153 8 chr20 1647179 1647310 -70506572 + MIR SINE MIR 100 249 -13 26 64 0 0 chr20 1650230 1650277 -70503605 + AT_rich Low_complexity Low_complexity 1 47 0 1099 218 21 0 chr20 1650478 1650712 -70503170 + MER106B DNA MER1_type 1 239 -820 2952 116 50 84 chr20 1650717 1651312 -70502570 + L1MA7 LINE L1 5711 6285 -6 2107 215 151 15 chr20 1651418 1651940 -70501942 - MLT1E LTR MaLR 0 593 1 879 182 27 27 chr20 1651940 1652157 -70501725 + MER106B DNA MER1_type 769 985 -74 1955 201 58 14 chr20 1652158 1652590 -70501292 + MLT1C LTR MaLR 1 451 -16 2100 137 0 9 chr20 1652655 1652970 -70500912 + AluJb SINE Alu 1 312 0 191 354 0 25 chr20 1654692 1654771 -70499111 + MIR SINE MIR 20 96 -166 * 251 314 21 57 chr20 1654770 1654840 -70499042 + L2 LINE L2 2263 2334 -980 2377 99 0 0 chr20 1654840 1655134 -70498748 - AluSq SINE Alu -19 294 1 251 314 21 57 chr20 1655134 1655257 -70498625 + L2 LINE L2 2334 2449 -865 677 160 65 53 chr20 1655290 1655459 -70498423 - LTR45B LTR ERV1 0 489 319 225 282 0 14 chr20 1655529 1655600 -70498282 - MER72 LTR ERV1 -243 479 410 262 337 128 8 chr20 1655814 1656063 -70497819 + L2 LINE L2 2480 2758 -556 1414 267 31 24 chr20 1656162 1656544 -70497338 - LTR16A LTR ERVL 0 450 66 315 98 0 20 chr20 1656951 1657002 -70496880 - L1MC2 LINE L1 -12 6332 6283 4676 153 18 31 chr20 1657002 1657869 -70496013 - L1MC3 LINE L1 -99 7686 6831 262 235 73 0 chr20 1658043 1658111 -70495771 - L2 LINE L2 0 3313 3241 4714 199 47 32 chr20 1658179 1658896 -70494986 + Tigger6a DNA MER2_type 1 706 -891 2317 117 3 0 chr20 1658896 1659204 -70494678 + AluSp SINE Alu 1 309 -4 4714 199 47 32 chr20 1659204 1659228 -70494654 + Tigger6a DNA MER2_type 706 728 -869 1864 131 109 68 chr20 1659228 1659639 -70494243 - MSTA LTR MaLR 0 428 1 4714 199 47 32 chr20 1659639 1659963 -70493919 + Tigger6a DNA MER2_type 728 1083 0 376 288 24 29 chr20 1659986 1660156 -70493726 - L2 LINE L2 -177 3136 2968 256 146 83 0 chr20 1660156 1660204 -70493678 - L2 LINE L2 -580 2734 2683 312 246 14 0 chr20 1660316 1660385 -70493497 - MER63 DNA MER1_type -14 1047 978 534 191 17 26 chr20 1660386 1660501 -70493381 - MER63 DNA MER1_type -311 751 12 183 261 0 0 chr20 1661246 1661292 -70492590 - L2 LINE L2 -6 3266 3221 311 152 139 0 chr20 1662233 1662312 -70491570 - MIR SINE MIR -70 192 103 30 0 0 0 chr20 1662769 1662799 -70491083 + AT_rich Low_complexity Low_complexity 1 30 0 462 313 59 28 chr20 1662860 1663215 -70490667 + LTR16A LTR ERVL 71 436 -14 566 323 98 26 chr20 1663226 1663755 -70490127 + HERV16 LTR ERVL 11 577 -4419 477 276 86 0 chr20 1664167 1664330 -70489552 + L1MDb LINE L1 4 180 -6229 1097 262 34 44 chr20 1664395 1664959 -70488923 + L1M4 LINE L1 3027 3584 -2562 204 283 0 0 chr20 1666982 1667035 -70486847 + MIR SINE MIR 204 256 -6 337 316 59 0 chr20 1667818 1667970 -70485912 - MIR SINE MIR -74 188 28 202 133 0 0 chr20 1669527 1669557 -70484325 + L2 LINE L2 3266 3295 -18 414 249 24 71 chr20 1670109 1670278 -70483604 + MER5B DNA MER1_type 18 178 0 491 315 65 9 chr20 1670357 1670589 -70483293 - MIR SINE MIR -4 258 14 209 216 93 31 chr20 1670656 1670753 -70483129 - MIR SINE MIR -77 185 83 249 241 147 23 chr20 1671538 1671697 -70482185 + MIR3 SINE MIR 12 183 -62 545 245 172 5 chr20 1672058 1672262 -70481620 - MLT1D LTR MaLR -125 380 143 1199 110 18 0 chr20 1672309 1672473 -70481409 + AluSp SINE Alu 1 167 -146 852 244 102 11 chr20 1672491 1672765 -70481117 + L1MC4a LINE L1 5567 5865 -1943 516 242 47 0 chr20 1672991 1673140 -70480742 + MIR3 SINE MIR 45 200 -8 375 278 9 0 chr20 1673523 1673638 -70480244 + L2 LINE L2 3193 3308 -5 367 227 118 0 chr20 1674483 1674593 -70479289 - MIR SINE MIR -38 224 102 1819 176 0 13 chr20 1674630 1674936 -70478946 - AluJb SINE Alu -10 302 1 530 258 111 29 chr20 1675040 1675319 -70478563 + MLT1I LTR MaLR 53 354 -55 538 165 61 0 chr20 1675354 1675469 -70478413 - MLT1D LTR MaLR -6 499 378 745 253 49 67 chr20 1675480 1675824 -70478058 + L1MA9 LINE L1 5939 6276 -36 281 197 154 124 chr20 1675824 1676058 -70477824 - MLT1D LTR MaLR -123 382 142 2888 245 25 27 chr20 1676058 1676955 -70476927 + L1M4c LINE L1 908 1802 -4582 2017 178 93 5 chr20 1676982 1677369 -70476513 - MER88 LTR ERVL -35 429 9 822 201 23 48 chr20 1677599 1677988 -70475894 + HERVL74 LTR ERVL 1997 2450 -3235 507 184 16 48 chr20 1677992 1678117 -70475765 + HERVL74 LTR ERVL 3530 3650 -2035 367 154 26 26 chr20 1678107 1678185 -70475697 + HERVL74 LTR ERVL 3907 3984 -1701 * 990 249 21 7 chr20 1678187 1678468 -70475414 + L1 LINE L1 3724 4008 -2138 323 272 60 60 chr20 1678485 1678669 -70475213 + L2 LINE L2 3130 3313 0 345 273 157 2 chr20 1678925 1679052 -70474830 + MIR SINE MIR 12 156 -52 444 82 0 0 chr20 1679533 1679594 -70474288 + (CTA)n Simple_repeat Simple_repeat 2 62 0 7389 185 27 10 chr20 1679605 1682042 -70471840 + L1MA8 LINE L1 3790 6260 -31 2310 111 0 40 chr20 1682164 1682515 -70471367 + MER1B DNA MER1_type 1 337 0 570 312 34 13 chr20 1682724 1682958 -70470924 + MIR SINE MIR 7 245 -17 2137 158 21 10 chr20 1683258 1683644 -70470238 + MLT1B LTR MaLR 1 390 0 255 281 16 55 chr20 1685558 1685686 -70468196 + MIR SINE MIR 65 187 -75 462 305 0 28 chr20 1686106 1686283 -70467599 - MIR SINE MIR -12 250 79 1810 130 53 56 chr20 1687517 1687850 -70466032 + THE1C LTR MaLR 1 335 -40 2232 99 3 0 chr20 1687850 1688164 -70465718 - AluSx SINE Alu 0 315 1 1810 130 53 56 chr20 1688164 1688205 -70465677 + THE1C LTR MaLR 335 375 0 2206 93 7 0 chr20 1689607 1689911 -70463971 + AluSp SINE Alu 1 306 0 730 274 20 5 chr20 1690317 1690514 -70463368 + MIR SINE MIR 28 227 -35 1683 216 92 0 chr20 1691535 1691924 -70461958 + L1MCa LINE L1 73 497 -5929 1106 229 107 7 chr20 1691924 1692234 -70461648 + Tigger6 DNA MER2_type 1255 1595 -2 185 292 62 0 chr20 1692461 1692574 -70461308 - L2 LINE L2 -661 2653 2534 546 250 48 36 chr20 1692582 1692750 -70461132 - MER63A DNA MER1_type -5 205 36 1933 177 110 3 chr20 1692978 1693368 -70460514 - MSTB1 LTR MaLR 0 432 1 308 200 125 0 chr20 1694897 1694977 -70458905 - MIR SINE MIR -70 192 103 1485 215 122 54 chr20 1695128 1695700 -70458182 + LTR36 LTR ERV1 1 611 0 577 312 60 23 chr20 1696105 1696458 -70457424 + LTR16A LTR ERVL 67 432 -18 462 292 36 18 chr20 1696472 1696640 -70457242 + HERV16 LTR ERVL 11 181 -4815 559 326 52 16 chr20 1696703 1697013 -70456869 + HERV16 LTR ERVL 274 594 -4402 594 241 42 12 chr20 1697405 1697571 -70456311 + L1MDb LINE L1 2 172 -6237 1150 287 24 20 chr20 1697646 1698197 -70455685 + L1M4 LINE L1 3028 3580 -2566 26 74 0 0 chr20 1698273 1698327 -70455555 + AT_rich Low_complexity Low_complexity 1 54 0 223 276 35 0 chr20 1698700 1698758 -70455124 + MER91 DNA MER1_type 131 190 0 202 133 0 0 chr20 1702555 1702585 -70451297 + L2 LINE L2 3266 3295 -18 414 249 24 71 chr20 1703136 1703305 -70450577 + MER5B DNA MER1_type 18 178 0 491 315 65 9 chr20 1703384 1703616 -70450266 - MIR SINE MIR -4 258 14 209 216 93 31 chr20 1703683 1703780 -70450102 - MIR SINE MIR -77 185 83 249 241 147 23 chr20 1704565 1704724 -70449158 + MIR3 SINE MIR 12 183 -62 507 241 177 5 chr20 1705085 1705288 -70448594 - MLT1D LTR MaLR -125 380 143 1100 146 18 0 chr20 1705335 1705499 -70448383 + AluSp SINE Alu 1 167 -146 727 275 99 4 chr20 1705517 1705790 -70448092 + L1MC4a LINE L1 5567 5865 -1943 570 221 47 0 chr20 1706016 1706165 -70447717 + MIR3 SINE MIR 45 200 -8 392 278 9 0 chr20 1706541 1706656 -70447226 + L2 LINE L2 3193 3308 -5 201 203 156 0 chr20 1706718 1706782 -70447100 + MIR3 SINE MIR 85 158 -50 24 32 0 0 chr20 1757607 1757638 -70396244 + AT_rich Low_complexity Low_complexity 1 31 0 396 174 49 125 chr20 1759648 1759792 -70394090 - AluJo SINE Alu -168 134 2 322 161 0 0 chr20 1759868 1759924 -70393958 - Charlie5 DNA MER1_type 0 2624 2569 585 271 181 46 chr20 1760099 1760708 -70393174 + L2 LINE L2 2614 3313 0 300 301 7 44 chr20 1760721 1760857 -70393025 - L2 LINE L2 -3 3310 3180 2181 98 3 0 chr20 1760989 1761286 -70392596 - AluSg SINE Alu -12 298 1 198 176 0 0 chr20 1761735 1761769 -70392113 + L2 LINE L2 3028 3061 -211 399 98 0 0 chr20 1761827 1761888 -70391994 + (TCCA)n Simple_repeat Simple_repeat 1 61 0 291 298 38 38 chr20 1761912 1762043 -70391839 - L2 LINE L2 -68 3245 3115 479 191 9 57 chr20 1762084 1762189 -70391693 + MER3 DNA MER1_type 29 128 -81 230 254 0 18 chr20 1762560 1762615 -70391267 + (TG)n Simple_repeat Simple_repeat 1 54 0 277 291 150 32 chr20 1763221 1763441 -70390441 - L2 LINE L2 -21 3292 3047 201 259 24 59 chr20 1764209 1764294 -70389588 - MIR3 SINE MIR -21 187 106 257 135 19 0 chr20 1764526 1764578 -70389304 + GA-rich Low_complexity Low_complexity 2 54 0 452 259 30 30 chr20 1764619 1764754 -70389128 + MIR SINE MIR 20 154 -108 209 398 31 8 chr20 1764946 1765074 -70388808 + L2 LINE L2 3164 3294 -19 * 264 275 144 64 chr20 1765063 1765299 -70388583 + L3 LINE CR1 1210 1464 -113 1139 276 109 35 chr20 1765395 1766073 -70387809 + L2 LINE L2 2334 3059 -213 728 256 56 40 chr20 1766766 1767016 -70386866 + MIR SINE MIR 9 262 0 475 270 81 0 chr20 1767092 1767203 -70386679 - L2 LINE L2 -2 3311 3192 302 262 47 37 chr20 1767218 1767325 -70386557 - L1MC4 LINE L1 -13 8029 7922 259 167 14 28 chr20 1768295 1768367 -70385515 + CT-rich Low_complexity Low_complexity 6 76 0 352 96 72 36 chr20 1768414 1768497 -70385385 - L1PA13 LINE L1 -4 6159 6074 1486 143 22 0 chr20 1768499 1768817 -70385065 - L1P4 LINE L1 -669 5496 5173 197 295 13 51 chr20 1770006 1770084 -70383798 - MIR SINE MIR -168 94 20 2081 113 7 0 chr20 1770427 1770719 -70383163 - AluSq SINE Alu -19 294 1 366 251 95 56 chr20 1770974 1771140 -70382742 + MIR SINE MIR 16 184 -68 5429 90 5 31 chr20 1771229 1772004 -70381878 + L1PA10 LINE L1 5413 6167 -1 391 244 148 17 chr20 1772147 1772262 -70381620 - MIR SINE MIR -117 145 16 831 208 35 0 chr20 1772357 1772530 -70381352 + MIR SINE MIR 17 195 -67 472 258 12 78 chr20 1773160 1773327 -70380555 + MIR SINE MIR 107 262 0 326 287 139 0 chr20 1773874 1773982 -70379900 - MIR SINE MIR -69 139 17 * 351 301 9 26 chr20 1773947 1774060 -70379822 + MIR SINE MIR 46 156 -106 402 295 59 31 chr20 1774265 1774519 -70379363 - LTR16C LTR ERVL 0 491 231 30 69 0 0 chr20 1775150 1775208 -70378674 + AT_rich Low_complexity Low_complexity 1 58 0 213 314 14 0 chr20 1775325 1775395 -70378487 + MIR SINE MIR 154 224 -38 305 286 11 33 chr20 1775971 1776062 -70377820 - MIR SINE MIR -95 113 25 270 278 100 0 chr20 1776289 1776379 -70377503 + MIR SINE MIR 43 141 -121 1038 88 0 0 chr20 1776554 1776701 -70377181 + (TCCA)n Simple_repeat Simple_repeat 1 147 0 181 313 31 0 chr20 1777293 1777357 -70376525 + L3 LINE CR1 1508 1573 -4 414 273 75 0 chr20 1777645 1777806 -70376076 + MIR SINE MIR 90 262 0 280 262 33 66 chr20 1777847 1777969 -70375913 + MIR SINE MIR 74 191 -71 348 283 106 0 chr20 1778855 1778968 -70374914 + L2 LINE L2 3189 3313 0 302 304 64 21 chr20 1779639 1779919 -70373963 - L1ME3A LINE L1 -214 5956 5665 312 27 0 0 chr20 1780055 1780092 -70373790 + (TA)n Simple_repeat Simple_repeat 1 37 0 227 154 77 0 chr20 1780092 1780144 -70373738 - L1MC4 LINE L1 -1339 6703 6648 5376 184 30 2 chr20 1780634 1782517 -70371365 + L1MA8 LINE L1 4358 6291 0 270 303 0 0 chr20 1782588 1782654 -70371228 + (CATA)n Simple_repeat Simple_repeat 3 68 0 303 180 0 66 chr20 1782659 1782720 -70371162 - L1MC4 LINE L1 -1337 6705 6649 694 261 46 42 chr20 1783005 1783243 -70370639 + MIR SINE MIR 7 245 -17 2225 145 18 8 chr20 1783567 1783953 -70369929 + MLT1B LTR MaLR 1 390 0 221 299 77 8 chr20 1785515 1785632 -70368250 + MIR SINE MIR 91 215 -47 326 343 36 0 chr20 1785861 1786001 -70367881 + MIR SINE MIR 56 200 -62 455 297 84 21 chr20 1786426 1786626 -70367256 - MIR SINE MIR -14 248 36 335 309 44 37 chr20 1786878 1787014 -70366868 + HAL1 LINE L1 881 1017 -1490 2136 161 71 27 chr20 1787138 1787548 -70366334 - MSTA LTR MaLR 0 428 1 8311 172 51 22 chr20 1787566 1788754 -70365128 - MSTA-int LTR MaLR -18 1633 386 1860 130 0 57 chr20 1788754 1789070 -70364812 - AluSg SINE Alu -12 298 1 8311 172 51 22 chr20 1789070 1789467 -70364415 - MSTA-int LTR MaLR -1265 386 2 2379 149 67 5 chr20 1789468 1789871 -70364011 - MSTA LTR MaLR 0 428 1 578 306 78 4 chr20 1790527 1790769 -70363113 + MIR SINE MIR 3 262 0 3308 171 46 5 chr20 1791713 1792322 -70361560 + L1MCa LINE L1 73 706 -5720 3095 236 30 7 chr20 1792329 1793074 -70360808 + Tigger6a DNA MER2_type 322 1083 0 405 296 23 28 chr20 1793091 1793267 -70360615 - L2 LINE L2 -171 3142 2968 261 243 322 0 chr20 1793267 1793419 -70360463 - L2 LINE L2 -580 2734 2534 608 257 50 35 chr20 1793422 1793624 -70360258 - MER63A DNA MER1_type 0 210 6 251 265 112 10 chr20 1795279 1795377 -70358505 - MIR SINE MIR -70 192 85 229 282 39 48 chr20 1795646 1795749 -70358133 - L3 LINE CR1 -4 1573 1472 21 0 0 0 chr20 1795863 1795884 -70357998 + AT_rich Low_complexity Low_complexity 1 21 0 604 307 48 40 chr20 1795931 1796309 -70357573 + LTR16A LTR ERVL 64 444 -6 681 331 96 23 chr20 1796334 1796856 -70357026 + HERV16 LTR ERVL 37 596 -4400 362 290 19 13 chr20 1797294 1797449 -70356433 + L1MDb LINE L1 53 208 -6201 1117 275 38 22 chr20 1797485 1798034 -70355848 + L1M4 LINE L1 3027 3584 -2562 2404 41 7 3 chr20 1798904 1799199 -70354683 - AluY SINE Alu -13 298 3 2528 31 0 0 chr20 1799457 1799751 -70354131 + AluY SINE Alu 2 295 -16 218 171 0 0 chr20 1800460 1800495 -70353387 + L2 LINE L2 3255 3289 -24 197 300 0 0 chr20 1800463 1800513 -70353369 + MIR SINE MIR 213 262 0 * 192 167 0 167 chr20 1800594 1800666 -70353216 + L2 LINE L2 3253 3312 -1 389 292 115 21 chr20 1801260 1801452 -70352430 - MIR SINE MIR -32 230 21 192 281 62 31 chr20 1801675 1801739 -70352143 + MIR SINE MIR 127 192 -70 189 270 0 0 chr20 1803000 1803037 -70350845 + L2 LINE L2 3258 3294 -19 27640 134 14 12 chr20 1803297 1809696 -70344186 - L1PA8 LINE L1 0 6487 4 556 250 24 55 chr20 1809997 1810161 -70343721 + MER5B DNA MER1_type 18 176 -2 772 290 63 8 chr20 1810242 1810480 -70343402 - MIR SINE MIR -4 258 8 303 274 62 26 chr20 1810542 1810655 -70343227 - MIR SINE MIR -78 184 68 247 263 105 44 chr20 1810678 1810792 -70343090 - MIR SINE MIR -44 218 98 2178 86 3 7 chr20 1811328 1811641 -70342241 - AluSp SINE Alu 0 313 1 258 247 27 14 chr20 1811825 1811898 -70341984 + MIR SINE MIR 108 181 -81 687 291 102 4 chr20 1812180 1812445 -70341437 + L1MC4a LINE L1 5567 5857 -1951 444 276 32 73 chr20 1812665 1812829 -70341053 + MIR3 SINE MIR 41 200 -8 402 288 0 9 chr20 1813204 1813315 -70340567 + L2 LINE L2 3193 3302 -11 227 93 23 0 chr20 1813321 1813364 -70340518 + (TAAAA)n Simple_repeat Simple_repeat 1 44 0 272 210 129 0 chr20 1813430 1813492 -70340390 + MIR3 SINE MIR 91 160 -48 283 338 29 29 chr20 1813496 1813632 -70340250 + MIR SINE MIR 20 155 -107 381 205 71 18 chr20 1814209 1814321 -70339561 - MIR SINE MIR -37 225 108 1425 214 20 0 chr20 1814321 1814625 -70339257 - AluJb SINE Alu -2 310 1 343 269 86 0 chr20 1814695 1814788 -70339094 - L1MC4 LINE L1 -1342 6700 6600 406 241 151 6 chr20 1814813 1814979 -70338903 - MLT1D LTR MaLR -174 331 142 3042 233 24 31 chr20 1814991 1815880 -70338002 + L1M4c LINE L1 921 1802 -4582 1671 194 19 24 chr20 1815888 1816303 -70337579 - MER88 LTR ERVL -5 459 2 230 254 0 18 chr20 1816464 1816519 -70337363 + (TG)n Simple_repeat Simple_repeat 1 54 0 277 291 150 32 chr20 1817126 1817346 -70336536 - L2 LINE L2 -21 3292 3047 201 259 24 59 chr20 1818114 1818199 -70335683 - MIR3 SINE MIR -21 187 106 257 135 19 0 chr20 1818431 1818483 -70335399 + GA-rich Low_complexity Low_complexity 2 54 0 442 267 30 30 chr20 1818523 1818658 -70335224 + MIR SINE MIR 20 154 -108 209 398 31 8 chr20 1818850 1818978 -70334904 + L2 LINE L2 3164 3294 -19 * 264 275 144 64 chr20 1818967 1819203 -70334679 + L3 LINE CR1 1210 1464 -113 1139 276 109 35 chr20 1819300 1819978 -70333904 + L2 LINE L2 2334 3059 -213 728 256 56 40 chr20 1820671 1820921 -70332961 + MIR SINE MIR 9 262 0 475 270 81 0 chr20 1820997 1821108 -70332774 - L2 LINE L2 -2 3311 3192 302 262 47 37 chr20 1821123 1821230 -70332652 - L1MC4 LINE L1 -13 8029 7922 259 167 14 28 chr20 1822200 1822272 -70331610 + CT-rich Low_complexity Low_complexity 6 76 0 352 96 72 36 chr20 1822319 1822402 -70331480 - L1PA13 LINE L1 -4 6159 6074 1486 143 22 0 chr20 1822404 1822722 -70331160 - L1P4 LINE L1 -669 5496 5173 197 295 13 51 chr20 1823874 1823952 -70329930 - MIR SINE MIR -168 94 20 2081 113 7 0 chr20 1824295 1824587 -70329295 - AluSq SINE Alu -19 294 1 366 251 95 56 chr20 1824842 1825008 -70328874 + MIR SINE MIR 16 184 -68 5429 90 5 31 chr20 1825097 1825872 -70328010 + L1PA10 LINE L1 5413 6167 -1 391 244 148 17 chr20 1826015 1826130 -70327752 - MIR SINE MIR -117 145 16 831 208 35 0 chr20 1826225 1826398 -70327484 + MIR SINE MIR 17 195 -67 472 258 12 78 chr20 1827028 1827195 -70326687 + MIR SINE MIR 107 262 0 326 287 139 0 chr20 1827742 1827850 -70326032 - MIR SINE MIR -69 139 17 * 351 301 9 26 chr20 1827815 1827928 -70325954 + MIR SINE MIR 46 156 -106 439 298 55 31 chr20 1828133 1828388 -70325494 - LTR16C LTR ERVL 0 491 231 30 69 0 0 chr20 1829019 1829077 -70324805 + AT_rich Low_complexity Low_complexity 1 58 0 213 314 14 0 chr20 1829194 1829264 -70324618 + MIR SINE MIR 154 224 -38 305 286 11 33 chr20 1829840 1829931 -70323951 - MIR SINE MIR -95 113 25 270 278 100 0 chr20 1830158 1830248 -70323634 + MIR SINE MIR 43 141 -121 1038 88 0 0 chr20 1830423 1830570 -70323312 + (TCCA)n Simple_repeat Simple_repeat 1 147 0 181 313 31 0 chr20 1831162 1831226 -70322656 + L3 LINE CR1 1508 1573 -4 416 246 26 0 chr20 1831514 1831628 -70322254 + MIR SINE MIR 90 206 -56 261 262 33 66 chr20 1831716 1831838 -70322044 + MIR SINE MIR 74 191 -71 329 303 40 0 chr20 1832738 1832837 -70321045 + L2 LINE L2 3211 3313 0 327 301 60 23 chr20 1833508 1833774 -70320108 - L1ME3A LINE L1 -214 5956 5681 1038 148 0 0 chr20 1833924 1834100 -70319782 + (TA)n Simple_repeat Simple_repeat 1 176 0 349 231 0 22 chr20 1834100 1834206 -70319676 - L1MCa LINE L1 -1339 6983 1996 311 169 46 0 chr20 1834188 1834253 -70319629 - L1MCa LINE L1 -4363 2063 1996 * 861 256 60 34 chr20 1834360 1834711 -70319171 + L1MEc LINE L1 1650 2009 -4387 302 149 95 25 chr20 1834834 1834913 -70318969 + L1 LINE L1 5000 5083 -1063 1049 142 0 7 chr20 1834913 1835068 -70318814 - AluSg/x SINE Alu -30 282 129 4142 139 38 17 chr20 1835301 1835993 -70317889 + Tigger1 DNA MER2_type 18 723 -1695 613 269 114 35 chr20 1836030 1836520 -70317362 - L1M4 LINE L1 -1393 4753 4225 1987 121 80 0 chr20 1836525 1836814 -70317068 - AluSx SINE Alu 0 312 1 781 261 65 50 chr20 1836860 1837243 -70316639 - HAL1 LINE L1 -1 2506 2118 2287 118 0 0 chr20 1837245 1837550 -70316332 - AluSx SINE Alu -7 305 1 3474 194 45 30 chr20 1837611 1838388 -70315494 - L1MD2 LINE L1 -249 6905 6117 3126 192 79 5 chr20 1838388 1839119 -70314763 + MER21B LTR ERV1 1 863 0 3813 216 56 53 chr20 1839119 1839932 -70313950 - L1MD2 LINE L1 -814 6127 5317 3512 138 0 77 chr20 1839932 1840532 -70313350 + MLT2B3 LTR ERVL 1 554 0 3813 216 56 53 chr20 1840532 1840714 -70313168 - L1MD2 LINE L1 -1624 5317 5137 2090 133 0 0 chr20 1840714 1841007 -70312875 + AluSx SINE Alu 1 293 -19 3813 216 56 53 chr20 1841007 1841244 -70312638 - L1MD2 LINE L1 -1804 5137 4891 2445 74 0 7 chr20 1843484 1843783 -70310099 + AluY SINE Alu 1 297 -14 205 237 34 17 chr20 1844184 1844243 -70309639 - MIR3 SINE MIR -19 189 130 448 184 46 55 chr20 1844767 1844876 -70309006 - L1MD2 LINE L1 -2040 4901 4794 11040 151 26 12 chr20 1844887 1846749 -70307133 - L1MA5 LINE L1 -6 6294 4367 234 0 0 0 chr20 1846749 1846775 -70307107 + (TTTTA)n Simple_repeat Simple_repeat 2 27 0 11040 151 26 12 chr20 1846775 1847868 -70306014 - L1MA5 LINE L1 -1933 4367 3291 923 213 0 10 chr20 1847870 1848072 -70305810 - L1 LINE L1 -1185 6023 5824 * 1603 176 13 3 chr20 1848062 1848561 -70305321 - L1 LINE L1 -3750 3458 2955 2070 221 5 0 chr20 1848563 1848956 -70304926 - L1 LINE L1 -6814 395 1 612 263 16 10 chr20 1848977 1849171 -70304711 - L1MD2 LINE L1 -2135 4806 4612 550 210 25 68 chr20 1849171 1849217 -70304665 - L1MD2 LINE L1 -3023 3918 3872 2066 138 21 0 chr20 1849217 1849508 -70304374 - AluSx SINE Alu -15 297 1 550 210 25 68 chr20 1849508 1849623 -70304259 - L1MD2 LINE L1 -3069 3872 3764 231 36 0 0 chr20 1849640 1849668 -70304214 + (TG)n Simple_repeat Simple_repeat 2 29 0 783 203 131 16 chr20 1849718 1850029 -70303853 - L1MC/D LINE L1 -492 5686 5412 427 33 33 0 chr20 1850029 1850090 -70303792 + (TCTA)n Simple_repeat Simple_repeat 4 66 0 783 203 131 16 chr20 1850090 1850490 -70303392 - L1MC/D LINE L1 -766 5412 4735 * 2478 161 13 12 chr20 1850486 1851225 -70302657 - L1P4 LINE L1 -505 5660 4924 1029 243 82 57 chr20 1851230 1851633 -70302249 - L1MD2 LINE L1 -5190 1233 821 967 345 50 23 chr20 1851725 1852291 -70301591 - L1MD2 LINE L1 -5826 597 17 718 282 50 0 chr20 1852294 1852496 -70301386 - L2 LINE L2 -772 2542 2331 485 190 0 0 chr20 1853704 1853783 -70300099 + AluJ/FRAM SINE Alu 218 296 -16 1549 231 61 20 chr20 1853987 1854428 -70299454 - L1ME2 LINE L1 -8 6156 5698 22 0 0 0 chr20 1855156 1855178 -70298704 + AT_rich Low_complexity Low_complexity 1 22 0 17925 28 2 0 chr20 1855178 1857942 -70295940 - L1PA2 LINE L1 0 6155 3387 765 183 13 12 chr20 1858457 1858696 -70295186 + GA-rich Low_complexity Low_complexity 1 239 0 246 191 0 0 chr20 1860421 1860468 -70293414 + MER94 DNA DNA 77 123 -11 306 314 39 0 chr20 1860752 1860854 -70293028 - MIR SINE MIR -66 196 91 2095 118 41 54 chr20 1861217 1861553 -70292329 - MSTB1 LTR MaLR -47 385 53 2627 115 25 3 chr20 1861553 1861909 -70291973 - THE1B LTR MaLR 0 364 1 2095 118 41 54 chr20 1861909 1861962 -70291920 - MSTB1 LTR MaLR -379 53 1 343 286 62 36 chr20 1861981 1862173 -70291709 + L1ME LINE L1 5367 5563 -599 2228 106 7 0 chr20 1862332 1862616 -70291266 - AluSx SINE Alu -21 291 6 1246 192 5 5 chr20 1862977 1863201 -70290681 - AluJo SINE Alu -37 275 52 2191 105 9 22 chr20 1863241 1863556 -70290326 + AluY SINE Alu 1 311 0 305 290 140 0 chr20 1863659 1863759 -70290123 - L2 LINE L2 -6 3307 3194 195 333 25 25 chr20 1864117 1864198 -70289684 + L2 LINE L2 3211 3291 -22 734 213 0 0 chr20 1864547 1864674 -70289208 - FLAM_A SINE Alu -5 128 2 216 0 0 0 chr20 1864689 1864713 -70289169 + (CA)n Simple_repeat Simple_repeat 2 25 0 566 116 23 0 chr20 1864717 1864803 -70289079 - L1MC2 LINE L1 -5 6339 6252 663 90 117 9 chr20 1864803 1864914 -70288968 - L1MC1 LINE L1 -217 6116 5994 2163 136 0 0 chr20 1864940 1865250 -70288632 - AluSx SINE Alu -2 310 1 592 68 0 0 chr20 1865251 1865325 -70288557 + MSTA LTR MaLR 355 428 0 266 265 12 36 chr20 1865453 1865536 -70288346 - MER4B-int LTR ERV1 -6064 694 614 1480 217 51 58 chr20 1866091 1866525 -70287357 - LTR56 LTR ERV1 -2 443 13 2530 134 53 14 chr20 1866641 1867074 -70286808 + LTR7 LTR ERV1 1 450 0 9636 184 26 35 chr20 1867074 1870153 -70283729 + HERVH LTR ERV1 1 3245 -3409 2741 166 0 0 chr20 1870132 1870579 -70283303 + HERVH LTR ERV1 3140 3586 -4127 * 6298 131 7 3 chr20 1870578 1871739 -70282143 + HERVH LTR ERV1 3811 4910 -2287 1652 149 8 0 chr20 1871739 1872007 -70281875 + HERVH LTR ERV1 5747 6016 -1697 * 3807 100 11 16 chr20 1872000 1872560 -70281322 + HERVH LTR ERV1 7157 7713 0 2299 121 114 24 chr20 1872560 1872973 -70280909 + LTR7 LTR ERV1 1 450 0 255 61 0 0 chr20 1873075 1873108 -70280774 + (T)n Simple_repeat Simple_repeat 1 33 0 1180 181 0 35 chr20 1873283 1873509 -70280373 - AluJb SINE Alu -9 303 86 2232 157 28 0 chr20 1873899 1874255 -70279627 + MER47A DNA MER2_type 1 366 0 2354 217 22 0 chr20 1874757 1875204 -70278678 + MER88 LTR ERVL 1 457 -7 3634 213 23 36 chr20 1875216 1876077 -70277805 - L1M4c LINE L1 -4583 1801 951 2166 114 0 3 chr20 1876077 1876366 -70277516 - AluSq SINE Alu -25 288 1 3634 213 23 36 chr20 1876366 1876410 -70277472 - L1M4c LINE L1 -5433 951 908 509 235 141 6 chr20 1876410 1876580 -70277302 + MLT1D LTR MaLR 142 334 -171 886 270 55 21 chr20 1876614 1876944 -70276938 - L1MA9 LINE L1 -36 6276 5936 400 264 8 8 chr20 1876952 1877077 -70276805 + MLT1D LTR MaLR 378 502 -3 732 289 88 19 chr20 1877102 1877420 -70276462 - MLT1I LTR MaLR -49 360 21 322 313 97 0 chr20 1877486 1877630 -70276252 + MIR SINE MIR 102 259 -3 223 280 133 0 chr20 1878290 1878365 -70275517 - MIR3 SINE MIR -46 162 78 369 336 0 0 chr20 1878421 1878537 -70275345 - L2 LINE L2 -5 3308 3193 407 296 57 28 chr20 1878910 1879086 -70274796 - MIR3 SINE MIR -10 198 18 188 238 0 0 chr20 1879109 1879151 -70274731 + L2 LINE L2 3263 3304 -9 1958 134 0 0 chr20 1879254 1879565 -70274317 - AluSx SINE Alu 0 319 9 620 261 109 39 chr20 1879592 1879849 -70274033 - L1MC4a LINE L1 -1957 5851 5577 211 287 164 14 chr20 1880131 1880319 -70273563 - MIR SINE MIR -39 223 17 5251 90 24 1 chr20 1880629 1881305 -70272577 + LTR8 LTR ERV1 1 691 0 241 311 67 0 chr20 1881675 1881794 -70272088 + MIR SINE MIR 103 229 -33 260 330 50 0 chr20 1881820 1881920 -70271962 + MIR SINE MIR 80 184 -78 264 245 69 29 chr20 1881974 1882076 -70271806 + MIR SINE MIR 80 185 -77 368 289 22 15 chr20 1882136 1882271 -70271611 + MIR SINE MIR 7 142 -120 14301 192 30 14 chr20 1882280 1886714 -70267168 - L1PBb LINE L1 -913 5949 1446 4281 256 27 20 chr20 1886715 1888925 -70264957 - L1PBa LINE L1 -5219 1644 3 2592 112 16 0 chr20 1889559 1889926 -70263956 + THE1C LTR MaLR 1 373 -2 563 315 68 5 chr20 1889964 1890186 -70263696 + MIR SINE MIR 18 253 -9 23 0 0 0 chr20 1890250 1890273 -70263609 + AT_rich Low_complexity Low_complexity 1 23 0 280 319 43 0 chr20 1890607 1890745 -70263137 - MIR SINE MIR -62 200 57 182 218 127 0 chr20 1891073 1891128 -70262754 - MIR SINE MIR -110 152 91 1773 147 55 50 chr20 1892705 1892806 -70261076 - MLT1B LTR MaLR -8 382 283 2186 103 7 3 chr20 1892806 1893137 -70260745 - AluSx SINE Alu 0 312 1 1773 147 55 50 chr20 1893137 1893415 -70260467 - MLT1B LTR MaLR -107 283 1 331 320 66 17 chr20 1893723 1893904 -70259978 - MIR SINE MIR -17 245 56 1924 143 7 30 chr20 1894109 1894410 -70259472 + AluSx SINE Alu 1 294 -18 240 302 0 0 chr20 1894472 1894535 -70259347 + (TG)n Simple_repeat Simple_repeat 2 64 0 28 71 0 0 chr20 1894554 1894610 -70259272 + AT_rich Low_complexity Low_complexity 1 56 0 6852 190 42 4 chr20 1894632 1897025 -70256857 - L1MA8 LINE L1 -22 6269 3785 486 301 91 32 chr20 1897419 1897638 -70256244 - MIR SINE MIR 0 262 31 375 280 6 57 chr20 1897915 1898090 -70255792 - L2 LINE L2 0 3313 3148 975 209 45 8 chr20 1898106 1898374 -70255508 - L1M4 LINE L1 -2145 4237 3960 367 154 92 0 chr20 1898382 1898447 -70255435 - HERVL74 LTR ERVL -1714 3971 3901 565 149 18 26 chr20 1898448 1898562 -70255320 - HERVL74 LTR ERVL -2044 3641 3529 996 221 8 41 chr20 1898564 1898973 -70254909 - HERVL74 LTR ERVL -1564 1992 1906 2372 195 31 7 chr20 1899185 1899632 -70254250 + MER88 LTR ERVL 2 459 -5 766 81 0 0 chr20 1899643 1899742 -70254140 - AluSc SINE Alu -15 294 196 1787 110 0 4 chr20 1899747 1899983 -70253899 - AluSc SINE Alu -74 235 1 2985 241 43 30 chr20 1899985 1900870 -70253012 - L1M4 LINE L1 -4582 1802 907 968 271 69 10 chr20 1901024 1901124 -70252758 - L1MA9 LINE L1 -46 6266 6173 396 0 0 0 chr20 1901124 1901168 -70252714 + (TG)n Simple_repeat Simple_repeat 2 45 0 968 271 69 10 chr20 1901168 1901373 -70252509 - L1MA9 LINE L1 -139 6173 5943 616 180 25 0 chr20 1901383 1901505 -70252377 + MLT1D LTR MaLR 377 501 -4 676 262 110 38 chr20 1901532 1901799 -70252083 - MLT1I LTR MaLR -49 360 65 2500 75 3 0 chr20 1901799 1902105 -70251777 + AluSp SINE Alu 1 307 -6 676 262 110 38 chr20 1902105 1902154 -70251728 - MLT1I LTR MaLR -344 65 21 381 261 108 0 chr20 1902220 1902350 -70251532 + MIR SINE MIR 102 245 -17 196 368 30 54 chr20 1902893 1903059 -70250823 - MIR3 SINE MIR -45 163 2 279 342 0 33 chr20 1903163 1903283 -70250599 - L2 LINE L2 -5 3308 3193 498 214 91 6 chr20 1903671 1903838 -70250044 - MIR3 SINE MIR -8 200 34 687 297 82 0 chr20 1904043 1904312 -70249570 - L1MC4a LINE L1 -1951 5857 5567 252 253 24 24 chr20 1904611 1904694 -70249188 - MIR SINE MIR -72 190 108 195 197 15 61 chr20 1906274 1906340 -70247542 + L2 LINE L2 2439 2501 -813 597 224 104 27 chr20 1906376 1906559 -70247323 + MER63A DNA MER1_type 14 210 0 1799 200 63 0 chr20 1906895 1907290 -70246592 - Tigger6 DNA MER2_type 0 1597 1178 7210 53 7 0 chr20 1907299 1908628 -70245254 - L1PA7 LINE L1 0 6154 4820 6587 114 48 0 chr20 1908628 1909577 -70244305 - L1P3 LINE L1 -5444 1017 23 451 232 8 16 chr20 1909577 1909702 -70244180 - Tigger6 DNA MER2_type -384 1213 1090 556 296 54 10 chr20 1910028 1910231 -70243651 - MIR SINE MIR -43 219 8 2499 137 62 5 chr20 1910896 1911299 -70242583 + MSTA LTR MaLR 1 426 -2 349 333 14 7 chr20 1911857 1912004 -70241878 + MIR SINE MIR 79 226 -36 297 262 10 10 chr20 1912486 1912582 -70241300 - MIR SINE MIR -62 146 66 2125 164 19 5 chr20 1914581 1914958 -70238924 - MLT1B LTR MaLR -8 382 1 553 283 33 53 chr20 1915283 1915527 -70238355 - MIR SINE MIR -17 245 7 207 232 0 0 chr20 1915763 1915819 -70238063 + (TA)n Simple_repeat Simple_repeat 1 56 0 5548 154 34 13 chr20 1915909 1916227 -70237655 - L1MA8 LINE L1 0 6291 5981 2176 93 0 4 chr20 1916227 1916506 -70237376 - AluSq SINE Alu -15 298 21 5548 154 34 13 chr20 1916506 1917289 -70236593 - L1MA8 LINE L1 -310 5981 5167 1607 204 42 0 chr20 1917330 1917663 -70236219 - L1MA8 LINE L1 -976 5170 4824 1008 229 0 8 chr20 1917662 1917898 -70235984 - L1MA8 LINE L1 -2123 4023 3790 * 1860 162 3 16 chr20 1918348 1918662 -70235220 - AluSx SINE Alu -2 310 1 374 279 90 69 chr20 1918671 1918904 -70234978 - MIR SINE MIR -13 249 12 371 285 16 59 chr20 1919166 1919352 -70234530 - L2 LINE L2 0 3313 3136 826 239 40 0 chr20 1919392 1919668 -70234214 - L1M4 LINE L1 -2135 4247 3961 355 156 26 26 chr20 1919671 1919748 -70234134 - HERVL74 LTR ERVL -1701 3984 3908 437 208 48 32 chr20 1919749 1919874 -70234008 - HERVL74 LTR ERVL -2042 3643 3517 * 750 223 11 17 chr20 1919865 1920040 -70233842 - HERVL74 LTR ERVL -3233 2452 2279 733 213 26 0 chr20 1920097 1920252 -70233630 - HERVL74 LTR ERVL -3530 2155 1997 2291 196 26 18 chr20 1920480 1920934 -70232948 + MER88 LTR ERVL 2 459 -5 450 259 18 0 chr20 1920942 1921054 -70232828 - L1M4 LINE L1 -4582 1802 1689 2413 243 34 32 chr20 1921178 1921948 -70231934 - L1M4 LINE L1 -4706 1678 908 471 228 192 31 chr20 1921949 1922142 -70231740 + MLT1D LTR MaLR 143 366 -139 1037 267 20 26 chr20 1922152 1922497 -70231385 - L1MA9 LINE L1 -34 6278 5936 481 232 16 0 chr20 1922498 1922623 -70231259 + MLT1D LTR MaLR 378 504 -1 737 306 79 6 chr20 1922634 1922951 -70230931 - MLT1I LTR MaLR -49 360 21 339 283 55 28 chr20 1923102 1923247 -70230635 + MIR SINE MIR 102 250 -12 686 284 108 22 chr20 1923719 1923987 -70229895 - L1MC4a LINE L1 -1951 5857 5567 1826 72 0 24 chr20 1924308 1924557 -70229325 - MER75B DNA T2_type 0 243 1 258 108 0 0 chr20 1925312 1925360 -70228522 + MIR SINE MIR 103 143 -65 242 208 50 50 chr20 1925453 1925554 -70228328 + MIR SINE MIR 84 184 -78 518 322 52 4 chr20 1925616 1925849 -70228033 + MIR SINE MIR 8 251 -11 435 278 18 77 chr20 1925937 1926106 -70227776 - MER5B DNA MER1_type -2 176 18 195 216 0 0 chr20 1926731 1926768 -70227114 - L2 LINE L2 -19 3294 3258 207 0 0 0 chr20 1927447 1927470 -70226412 + (CAA)n Simple_repeat Simple_repeat 2 24 0 3584 112 8 4 chr20 1928184 1928693 -70225189 + MER9 LTR ERVK 1 511 0 192 149 0 0 chr20 1929537 1929584 -70224298 + (CTAG)n Simple_repeat Simple_repeat 3 49 0 271 279 15 0 chr20 1931024 1931092 -70222790 - MER91 DNA MER1_type 0 190 122 2098 118 0 4 chr20 1931630 1931909 -70221973 + AluSg SINE Alu 1 278 -32 1005 122 6 17 chr20 1931913 1932095 -70221787 + (GAAA)n Simple_repeat Simple_repeat 1 179 0 1282 157 16 48 chr20 1932173 1932224 -70221658 - Tigger3(Golem) DNA MER2_type -3 3035 2984 4078 109 22 12 chr20 1932224 1932820 -70221062 + LTR43 LTR ERV1 1 602 0 1282 157 16 48 chr20 1932820 1933016 -70220866 - Tigger3(Golem) DNA MER2_type -54 2984 2796 1433 183 56 0 chr20 1933026 1933294 -70220588 + AluJb SINE Alu 12 294 -18 3208 125 29 91 chr20 1933303 1933548 -70220334 - Tigger3(Golem) DNA MER2_type -231 2798 2539 1507 181 63 13 chr20 1933548 1933851 -70220031 - 7SLRNA srpRNA srpRNA -1 319 2 3208 125 29 91 chr20 1933851 1934300 -70219582 - Tigger3(Golem) DNA MER2_type -490 2539 2147 321 223 27 18 chr20 1934382 1934494 -70219388 + L1MC/D LINE L1 5319 5431 -2377 383 82 0 0 chr20 1934499 1934548 -70219334 - Tigger3(Golem) DNA MER2_type -870 2159 2111 2385 165 48 10 chr20 1935930 1936342 -70217540 + MSTB1 LTR MaLR 5 432 0 358 289 117 22 chr20 1936466 1936548 -70217334 + L2 LINE L2 2439 2512 -802 580 303 24 14 chr20 1936548 1936756 -70217126 + MER63A DNA MER1_type 1 210 0 358 289 117 22 chr20 1936756 1936853 -70217029 + L2 LINE L2 2512 2635 -679 2362 49 0 23 chr20 1936876 1937180 -70216702 - AluY SINE Alu -14 297 1 281 328 6 71 chr20 1937226 1937409 -70216473 + L2 LINE L2 2968 3138 -175 1331 189 98 7 chr20 1937435 1937742 -70216140 - Tigger6 DNA MER2_type -6 1591 1257 1882 223 47 0 chr20 1937744 1938148 -70215734 - L1MCa LINE L1 -5929 497 75 679 295 29 19 chr20 1939156 1939363 -70214519 - MIR SINE MIR -35 227 19 362 241 58 135 chr20 1939875 1940149 -70213733 - L1MEd LINE L1 -5069 1050 798 654 322 57 12 chr20 1940471 1940716 -70213166 + MIR SINE MIR 6 261 -1 272 346 46 0 chr20 1941138 1941268 -70212614 - MIR SINE MIR -70 192 57 234 277 69 10 chr20 1941517 1941618 -70212264 - MIR SINE MIR -65 197 91 2011 174 23 23 chr20 1942931 1943226 -70210656 - MLT1B LTR MaLR 0 390 93 911 69 76 15 chr20 1943226 1943357 -70210525 - MER85 DNA T2_type 0 139 1 2011 174 23 23 chr20 1943357 1943451 -70210431 - MLT1B LTR MaLR -296 94 1 558 298 56 36 chr20 1943760 1944012 -70209870 - MIR SINE MIR 0 262 6 218 231 15 0 chr20 1944264 1944329 -70209553 + (CATATA)n Simple_repeat Simple_repeat 3 68 0 5661 162 25 6 chr20 1944401 1945951 -70207931 - L1MA8 LINE L1 0 6291 4711 2118 119 0 3 chr20 1945951 1946254 -70207628 - AluSc SINE Alu -7 302 1 5661 162 25 6 chr20 1946254 1946287 -70207595 - L1MA8 LINE L1 -1580 4711 4680 384 259 0 0 chr20 1946284 1946369 -70207513 - L1MA8 LINE L1 -2277 3869 3785 * 686 298 97 9 chr20 1946791 1947019 -70206863 - MIR SINE MIR -3 259 12 408 270 24 66 chr20 1947272 1947483 -70206399 - L2 LINE L2 0 3313 3112 746 236 27 41 chr20 1947488 1947780 -70206102 - L1M4 LINE L1 -2135 4011 3724 378 121 17 0 chr20 1947787 1947845 -70206037 - HERVL74 LTR ERVL -1705 3980 3922 645 232 35 84 chr20 1947973 1948374 -70205508 - HERVL74 LTR ERVL -3233 2452 1997 227 319 0 0 chr20 1948648 1948739 -70205143 - L2 LINE L2 -300 2972 2882 325 211 19 10 chr20 1948766 1948870 -70205012 + (TG)n Simple_repeat Simple_repeat 1 105 0 205 279 16 16 chr20 1948990 1949051 -70204831 - L2 LINE L2 -50 3263 3203 298 74 37 0 chr20 1949367 1949421 -70204461 + (TG)n Simple_repeat Simple_repeat 2 57 0 230 243 14 14 chr20 1949661 1949731 -70204151 - MIR SINE MIR -129 133 64 312 192 100 0 chr20 1950182 1950264 -70203618 - MIR SINE MIR -65 197 105 383 222 69 106 chr20 1950264 1950453 -70203429 + MER5A DNA MER1_type 1 182 -7 480 225 219 25 chr20 1950732 1950892 -70202990 - MIR SINE MIR -70 192 2 517 284 158 2 chr20 1950896 1951115 -70202767 + MIR SINE MIR 13 260 -2 1856 185 95 19 chr20 1951209 1951577 -70202305 - MSTD LTR MaLR 0 396 1 348 257 18 28 chr20 1951950 1952059 -70201823 - MIR SINE MIR -118 144 37 233 245 0 20 chr20 1952073 1952122 -70201760 - L2 LINE L2 -9 3263 3216 319 155 0 17 chr20 1952593 1952651 -70201231 - MIR SINE MIR -105 157 101 1151 243 108 49 chr20 1952956 1953535 -70200347 + L2 LINE L2 2701 3312 -1 290 286 109 8 chr20 1953545 1953664 -70200218 - MIR SINE MIR -65 197 67 491 237 153 6 chr20 1953664 1953841 -70200041 + LTR16A LTR ERVL 16 218 -232 2221 102 8 72 chr20 1953937 1954299 -70199583 + MLT1B LTR MaLR 4 342 -48 306 284 0 0 chr20 1954308 1954389 -70199493 + L2 LINE L2 2743 2823 -491 * 435 305 23 8 chr20 1954376 1954504 -70199378 + L2 LINE L2 3180 3309 -4 608 126 0 0 chr20 1954570 1954660 -70199222 - MLT1C LTR MaLR -46 459 333 2077 131 0 0 chr20 1954692 1955004 -70198878 - AluSx SINE Alu 0 312 1 273 128 0 0 chr20 1955007 1955046 -70198836 + MLT1B LTR MaLR 352 390 0 405 282 43 0 chr20 1955047 1955164 -70198718 - MIR SINE MIR -62 200 79 664 121 17 26 chr20 1955615 1955731 -70198151 - Charlie1 DNA MER1_type -16 2745 2631 1916 139 19 10 chr20 1955738 1956047 -70197835 + AluSx SINE Alu 1 312 0 717 89 32 8 chr20 1956051 1956174 -70197708 + GA-rich Low_complexity Low_complexity 2 127 0 772 242 34 6 chr20 1956201 1956379 -70197503 - MIR SINE MIR -78 184 2 352 313 30 30 chr20 1956960 1957091 -70196791 - L2 LINE L2 -4 3268 3138 180 171 0 73 chr20 1957155 1957196 -70196686 + L2 LINE L2 3271 3308 -5 858 194 191 12 chr20 1957246 1957498 -70196384 - MLT1J2 LTR MaLR 0 450 154 632 207 72 33 chr20 1957701 1957951 -70195931 - MLT1K LTR MaLR -1 587 295 204 168 12 62 chr20 1958018 1958179 -70195703 + (TA)n Simple_repeat Simple_repeat 1 153 0 335 293 130 40 chr20 1959058 1959311 -70194571 - L1ME4a LINE L1 -2 6119 5844 215 294 15 0 chr20 1959311 1959379 -70194503 + L2 LINE L2 3148 3216 -56 332 320 39 8 chr20 1959451 1959579 -70194303 - MIR SINE MIR -46 216 85 802 150 0 0 chr20 1959788 1959921 -70193961 - FRAM SINE Alu -3 173 41 1186 237 49 23 chr20 1960250 1960558 -70193324 + LTR16C LTR ERVL 169 484 -7 629 286 37 86 chr20 1960836 1961185 -70192697 + L2 LINE L2 2922 3253 -19 354 277 34 0 chr20 1962068 1962187 -70191695 + MIR3 SINE MIR 9 131 -77 725 302 35 58 chr20 1962351 1962778 -70191104 + L2 LINE L2 2897 3313 0 191 215 253 0 chr20 1963100 1963179 -70190703 - MIR SINE MIR -1 261 163 * 425 186 144 0 chr20 1963170 1963267 -70190615 + L2 LINE L2 3203 3313 0 * 455 211 79 9 chr20 1963265 1963379 -70190503 - MIR SINE MIR -115 147 26 270 175 68 42 chr20 1964142 1964249 -70189633 + MLT1L LTR MaLR 200 391 -202 356 231 161 46 chr20 1964325 1964455 -70189427 + L2 LINE L2 3163 3307 -6 577 268 95 85 chr20 1964825 1965236 -70188646 - MLT1J LTR MaLR -6 505 91 260 197 66 16 chr20 1965182 1965243 -70188639 - LTR67 LTR ERVL -403 154 91 * 806 285 38 13 chr20 1965399 1965634 -70188248 + MIR SINE MIR 8 248 -14 2628 124 12 19 chr20 1965648 1966074 -70187808 + L1PA13 LINE L1 5737 6159 -4 261 258 124 0 chr20 1966218 1966307 -70187575 + MIR SINE MIR 48 147 -61 311 206 137 0 chr20 1966886 1966959 -70186923 + MIR SINE MIR 64 146 -62 987 205 60 5 chr20 1967233 1967448 -70186434 - MIR SINE MIR 0 262 36 402 308 83 6 chr20 1967507 1967663 -70186219 - L3 LINE CR1 -56 1521 1354 432 232 113 26 chr20 1967852 1968003 -70185879 + MIR SINE MIR 98 261 -1 314 284 71 31 chr20 1968093 1968220 -70185662 - MIR3 SINE MIR -10 198 67 324 253 241 44 chr20 1968551 1968709 -70185173 + MIR3 SINE MIR 2 152 -56 641 169 0 4 chr20 1969469 1969604 -70184278 - MER5A DNA MER1_type 0 189 1 271 259 0 0 chr20 1969639 1969693 -70184189 - L2 LINE L2 -51 3221 3168 504 347 31 5 chr20 1969715 1969911 -70183971 + MIR SINE MIR 4 204 -58 1558 159 14 27 chr20 1969926 1970222 -70183660 + AluJo SINE Alu 1 292 -20 791 296 106 40 chr20 1970346 1970724 -70183158 - L2 LINE L2 0 3313 2911 339 330 35 25 chr20 1970908 1971108 -70182774 + MIR SINE MIR 61 262 0 361 269 82 15 chr20 1971521 1971655 -70182227 - L1ME4a LINE L1 -2 6119 5977 273 252 71 31 chr20 1971728 1971855 -70182027 - L1ME4a LINE L1 -266 5855 5724 915 295 58 42 chr20 1972417 1972899 -70180983 - MLT1L LTR MaLR -79 536 47 324 321 123 43 chr20 1973016 1973365 -70180517 + MLT1K LTR MaLR 179 555 -33 413 267 33 13 chr20 1973421 1973571 -70180311 + MER103 DNA DNA 1 153 -13 470 17 17 0 chr20 1973917 1973976 -70179906 + (CA)n Simple_repeat Simple_repeat 2 61 0 255 283 75 19 chr20 1973979 1974085 -70179797 + L2 LINE L2 3142 3253 -19 313 300 31 31 chr20 1974109 1974239 -70179643 - MIR3 SINE MIR -27 181 52 218 248 9 53 chr20 1974245 1974358 -70179524 + C-rich Low_complexity Low_complexity 4 111 0 823 107 0 50 chr20 1974366 1974487 -70179395 + AluSq SINE Alu 69 183 -130 1911 111 7 28 chr20 1974493 1974831 -70179051 - AluSx SINE Alu 0 332 1 384 219 110 0 chr20 1974852 1974934 -70178948 + MER117 DNA MER1_type 60 150 -47 288 282 154 44 chr20 1975129 1975512 -70178370 - L2 LINE L2 -340 2974 2550 1418 272 40 45 chr20 1975955 1976575 -70177307 + L2 LINE L2 2525 3139 -174 2794 88 6 0 chr20 1976575 1976937 -70176945 + THE1B LTR MaLR 1 364 0 1418 272 40 45 chr20 1976937 1977111 -70176771 + L2 LINE L2 3139 3312 -1 481 268 45 66 chr20 1977189 1977476 -70176406 - L1MCa LINE L1 -5232 1194 914 587 301 28 38 chr20 1978002 1978215 -70175667 + MIR SINE MIR 52 262 0 1137 217 13 4 chr20 1978725 1978955 -70174927 - MIR SINE MIR -22 240 9 183 227 23 45 chr20 1979465 1979509 -70174373 + L2 LINE L2 3205 3247 -25 796 288 151 24 chr20 1979642 1979753 -70174129 + L2 LINE L2 2844 2940 -373 1929 174 7 64 chr20 1979753 1980001 -70173881 - MSTD LTR MaLR 0 396 180 1905 142 30 3 chr20 1980001 1980303 -70173579 - AluSx SINE Alu -2 310 1 1929 174 7 64 chr20 1980303 1980474 -70173408 - MSTD LTR MaLR -216 180 1 796 288 151 24 chr20 1980474 1980779 -70173103 + L2 LINE L2 2940 3313 0 1050 261 103 40 chr20 1981131 1981609 -70172273 - L2 LINE L2 -1 3312 2803 3192 157 38 7 chr20 1981713 1982273 -70171609 - L1MB3 LINE L1 0 6183 5607 1159 287 80 22 chr20 1983272 1983735 -70170147 + L2 LINE L2 2817 3306 -7 973 294 89 12 chr20 1983759 1984341 -70169541 + L2 LINE L2 2566 3186 -127 368 290 75 32 chr20 1984677 1984863 -70169019 + L2 LINE L2 3119 3312 -1 238 342 63 0 chr20 1984894 1985005 -70168877 - MIR SINE MIR -75 187 70 270 318 0 13 chr20 1985005 1985159 -70168723 + (TG)n Simple_repeat Simple_repeat 1 152 0 509 256 143 30 chr20 1985964 1986167 -70167715 + MIR SINE MIR 8 233 -29 589 276 158 13 chr20 1986186 1986414 -70167468 - MIR SINE MIR 0 262 2 441 277 22 36 chr20 1986578 1986715 -70167167 - MIR3 SINE MIR -32 176 42 451 254 127 78 chr20 1986833 1987038 -70166844 - MIR SINE MIR -17 245 31 1525 240 113 15 chr20 1987190 1988024 -70165858 - L2 LINE L2 -5 3308 2380 808 209 12 6 chr20 1988076 1988239 -70165643 - MER5A DNA MER1_type -23 166 3 857 289 29 26 chr20 1988643 1988987 -70164895 + MLT1I LTR MaLR 5 349 -60 726 213 202 0 chr20 1988987 1989170 -70164712 - MER58A DNA MER1_type 0 224 5 280 151 19 0 chr20 1989170 1989223 -70164659 + MLT1I LTR MaLR 340 393 -16 908 297 82 25 chr20 1989330 1989815 -70164067 + LTR33 LTR ERVL 4 516 -5 182 286 117 39 chr20 1989847 1989924 -70163958 + MIR SINE MIR 64 146 -62 422 208 140 1 chr20 1990213 1990336 -70163546 + MIR SINE MIR 32 166 -85 364 311 48 0 chr20 1990350 1990453 -70163429 + L2 LINE L2 3206 3313 0 366 333 135 0 chr20 1990498 1990639 -70163243 + MIR SINE MIR 44 203 -59 466 191 198 0 chr20 1990777 1990903 -70162979 - MIR SINE MIR -74 188 38 215 342 36 63 chr20 1990951 1991062 -70162820 + MIR3 SINE MIR 76 183 -25 386 316 21 21 chr20 1991818 1992005 -70161877 + MIR3 SINE MIR 1 187 -21 1569 268 123 2 chr20 1992446 1992860 -70161022 + LTR16B LTR ERVL 1 464 0 432 255 179 0 chr20 1992914 1993059 -70160823 - MIR SINE MIR -3 259 89 254 343 6 90 chr20 1993090 1993256 -70160626 + L2 LINE L2 3121 3272 0 258 241 52 0 chr20 1993516 1993574 -70160308 + MIR SINE MIR 112 172 -90 508 243 7 49 chr20 1993991 1994135 -70159747 - MIR3 SINE MIR -26 182 45 * 758 315 121 30 chr20 1994126 1994149 -70159733 + L2 LINE L2 2488 2507 -806 234 0 0 0 chr20 1994149 1994175 -70159707 + (TTCA)n Simple_repeat Simple_repeat 2 27 0 758 315 121 30 chr20 1994175 1994880 -70159002 + L2 LINE L2 2507 3297 -16 180 0 0 0 chr20 1994974 1994994 -70158888 + (TTTTA)n Simple_repeat Simple_repeat 1 20 0 1778 152 0 31 chr20 1994994 1995283 -70158599 - AluJo SINE Alu -32 280 1 730 167 0 38 chr20 1995315 1995501 -70158381 + GA-rich Low_complexity Low_complexity 2 180 0 446 281 113 0 chr20 1996470 1996659 -70157223 + MIR SINE MIR 34 244 -18 221 333 0 0 chr20 1996940 1997003 -70156879 + L2 LINE L2 2913 2975 -338 363 283 100 33 chr20 1997153 1997273 -70156609 - L2 LINE L2 -1 3271 3144 * 514 231 29 0 chr20 1997271 1997375 -70156507 - MER5B DNA MER1_type -4 174 68 2028 138 0 25 chr20 1997378 1997743 -70156139 - AluJb SINE Alu 0 357 1 189 311 16 0 chr20 1997751 1997812 -70156070 - MER5B DNA MER1_type -113 65 4 457 300 64 53 chr20 1997819 1998176 -70155706 - L2 LINE L2 -127 3186 2826 300 270 101 20 chr20 1999063 1999211 -70154671 + MIR3 SINE MIR 46 205 -3 203 227 45 45 chr20 1999931 1999997 -70153885 + MIR SINE MIR 86 151 -57 271 301 112 36 chr20 2000345 2000511 -70153371 + MIR SINE MIR 15 192 -62 340 311 9 0 chr20 2000713 2000819 -70153063 + MIR3 SINE MIR 63 169 -39 235 333 48 12 chr20 2001094 2001178 -70152704 - L2 LINE L2 -23 3290 3204 941 229 86 25 chr20 2001215 2001569 -70152313 - L1M4 LINE L1 -3676 3172 2795 * 1268 211 215 39 chr20 2001548 2001873 -70152009 - L1M4 LINE L1 -5239 1611 1345 188 35 35 0 chr20 2001873 2001902 -70151980 + (TTG)n Simple_repeat Simple_repeat 1 30 0 1268 211 215 39 chr20 2001902 2002093 -70151789 - L1M4 LINE L1 -5505 1345 1004 342 288 59 31 chr20 2002353 2002575 -70151307 - L1M4 LINE L1 -6301 445 218 268 305 228 18 chr20 2002676 2003063 -70150819 - L2 LINE L2 -190 3082 2596 669 319 31 4 chr20 2003513 2003742 -70150140 + MIR SINE MIR 16 250 -12 210 365 137 32 chr20 2004066 2004729 -70149153 - L2 LINE L2 -347 2967 2235 642 264 3 6 chr20 2005342 2005666 -70148216 + GA-rich Low_complexity Low_complexity 1 322 0 282 257 20 20 chr20 2005377 2005478 -70148404 + (CAGAGA)n Simple_repeat Simple_repeat 2 102 0 * 294 231 19 28 chr20 2005694 2005802 -70148080 + GA-rich Low_complexity Low_complexity 2 108 0 381 86 0 0 chr20 2005888 2005946 -70147936 + (GA)n Simple_repeat Simple_repeat 1 58 0 224 325 8 8 chr20 2005960 2006132 -70147750 + GA-rich Low_complexity Low_complexity 1 172 0 431 349 32 32 chr20 2006362 2006580 -70147302 + MIR SINE MIR 8 225 -37 359 316 70 13 chr20 2007613 2007771 -70146111 - MER117 DNA MER1_type -27 170 4 570 273 42 70 chr20 2007846 2008132 -70145750 - L2 LINE L2 -20 3293 3016 818 281 142 8 chr20 2008708 2009160 -70144722 - L2 LINE L2 -235 3078 2566 1143 123 0 0 chr20 2009201 2009421 -70144461 + (TCCA)n Simple_repeat Simple_repeat 1 220 0 462 284 89 98 chr20 2009431 2009868 -70144014 - L2 LINE L2 -3 3269 2837 1304 235 94 27 chr20 2010429 2010801 -70143081 + L2 LINE L2 2880 3283 -30 1934 137 3 51 chr20 2010801 2011114 -70142768 - AluSx SINE Alu -14 298 1 1304 235 94 27 chr20 2011114 2011145 -70142737 + L2 LINE L2 3283 3310 -3 305 305 21 21 chr20 2011191 2011286 -70142596 - MIR SINE MIR -148 114 20 820 180 19 66 chr20 2011297 2011338 -70142544 + L2 LINE L2 3112 3153 -160 2133 89 30 43 chr20 2011338 2011641 -70142241 - AluSx SINE Alu -13 299 1 820 180 19 66 chr20 2011641 2011810 -70142072 + L2 LINE L2 3153 3312 -1 623 189 101 63 chr20 2011931 2012090 -70141792 - MIR SINE MIR -70 192 28 296 285 26 80 chr20 2012788 2012939 -70140943 + MER5B DNA MER1_type 3 145 -33 1724 290 92 15 chr20 2013653 2014640 -70139242 - L2 LINE L2 -1 3312 2246 539 278 101 44 chr20 2015407 2015655 -70138227 + MIR SINE MIR 1 262 0 544 276 78 43 chr20 2015664 2015896 -70137986 - MIR SINE MIR -13 249 10 206 246 35 35 chr20 2016174 2016231 -70137651 - MIR SINE MIR -98 164 108 606 266 106 19 chr20 2016706 2016913 -70136969 + MIR SINE MIR 14 238 -24 183 42 0 0 chr20 2017112 2017136 -70136746 + (CAA)n Simple_repeat Simple_repeat 1 24 0 890 255 65 47 chr20 2017148 2017436 -70136446 + MLT1J LTR MaLR 3 299 -212 1859 235 88 32 chr20 2017436 2017960 -70135922 + MLT1H1 LTR MaLR 1 553 -2 890 255 65 47 chr20 2017960 2017993 -70135889 + MLT1J LTR MaLR 299 330 -181 243 182 13 91 chr20 2018005 2018082 -70135800 + MLT1J LTR MaLR 386 456 -55 391 280 48 71 chr20 2018326 2018494 -70135388 + MIR SINE MIR 26 189 -73 1309 242 120 54 chr20 2018599 2019133 -70134749 - MER115 DNA AcHobo -66 627 59 216 318 0 30 chr20 2019152 2019218 -70134664 - L2 LINE L2 -37 3235 3172 185 158 0 79 chr20 2019253 2019291 -70134591 + MIR SINE MIR 113 147 -61 417 257 155 30 chr20 2019500 2019839 -70134043 + L2 LINE L2 2751 3132 -181 249 257 95 0 chr20 2020102 2020176 -70133706 + MIR SINE MIR 177 257 -5 23 54 0 0 chr20 2020906 2020943 -70132939 + GC_rich Low_complexity Low_complexity 1 37 0 187 54 54 0 chr20 2020948 2020985 -70132897 + (CGGAG)n Simple_repeat Simple_repeat 5 43 0 537 299 14 14 chr20 2021237 2021381 -70132501 + MIR3 SINE MIR 3 146 -62 274 256 91 33 chr20 2022073 2022194 -70131688 - L1MC4a LINE L1 -1631 6177 6050 673 284 21 17 chr20 2022274 2022513 -70131369 - L1MC4a LINE L1 -1893 5915 5676 334 225 132 79 chr20 2022535 2022762 -70131120 - MLT1H LTR MaLR -9 540 332 582 249 74 21 chr20 2022803 2022992 -70130890 - MLT1H LTR MaLR -331 218 20 577 199 41 53 chr20 2023165 2023336 -70130546 + L1MC3 LINE L1 7221 7389 -396 7890 166 51 73 chr20 2023342 2024317 -70129565 - L1MC3 LINE L1 -620 7583 6671 2285 83 20 0 chr20 2024317 2024618 -70129264 - AluSp SINE Alu -6 307 1 7890 166 51 73 chr20 2024618 2025593 -70128289 - L1MC3 LINE L1 -1532 6671 5676 1703 172 42 20 chr20 2025600 2025954 -70127928 + MLT2B1 LTR ERVL 1 362 -158 7906 247 68 24 chr20 2025985 2026044 -70127838 - L1MC3 LINE L1 -886 5678 5623 1536 185 35 0 chr20 2026044 2026304 -70127578 - AluJo SINE Alu -2 310 42 1720 136 0 19 chr20 2026306 2026564 -70127318 - AluSx SINE Alu -59 253 1 7906 247 68 24 chr20 2026564 2027047 -70126835 - L1MC3 LINE L1 -941 5623 5162 1494 138 0 9 chr20 2027047 2027272 -70126610 - AluSg/x SINE Alu -3 307 85 7906 247 68 24 chr20 2027272 2029568 -70124314 - L1MC3 LINE L1 -1402 5162 2713 1532 163 15 45 chr20 2029583 2029674 -70124208 - L1MB7 LINE L1 -19 6165 6073 2009 113 63 14 chr20 2029674 2029958 -70123924 + AluSx SINE Alu 2 299 -13 1532 163 15 45 chr20 2029958 2030198 -70123684 - L1MB7 LINE L1 -111 6073 5844 345 191 0 0 chr20 2030202 2030265 -70123617 - FRAM/FAM SINE Alu -100 66 4 1394 170 10 35 chr20 2030265 2030554 -70123328 - L1MB7 LINE L1 -346 5838 5557 2738 185 50 35 chr20 2030561 2031775 -70122107 - L1MB4 LINE L1 -250 5930 4693 1080 184 108 54 chr20 2031782 2032098 -70121784 + MLT1D LTR MaLR 173 505 0 * 1091 155 11 0 chr20 2032096 2032283 -70121599 - MER46B DNA MER2_type 0 236 48 2307 106 48 34 chr20 2032284 2032642 -70121240 + THE1B LTR MaLR 1 363 -1 315 0 0 0 chr20 2032711 2032746 -70121136 + (TG)n Simple_repeat Simple_repeat 2 36 0 719 170 0 0 chr20 2032756 2032862 -70121020 - FLAM_A SINE Alu -25 117 12 1125 135 6 0 chr20 2032873 2033051 -70120831 - MER46B DNA MER2_type -181 55 2 1970 244 89 78 chr20 2033054 2034008 -70119874 - L1MC3 LINE L1 -5080 965 1 246 297 28 83 chr20 2034317 2034462 -70119420 + L2 LINE L2 3177 3313 0 725 270 42 0 chr20 2034507 2034696 -70119186 - MIR SINE MIR 0 262 66 372 371 7 0 chr20 2034790 2034930 -70118952 - MIR SINE MIR -109 153 13 232 278 56 0 chr20 2034964 2035054 -70118828 + L2 LINE L2 2963 3057 -215 234 315 105 49 chr20 2035134 2035277 -70118605 + MIR SINE MIR 2 152 -110 229 365 149 14 chr20 2035343 2035491 -70118391 + L2 LINE L2 3104 3271 -1 230 253 0 58 chr20 2035611 2035698 -70118184 + MER112 DNA MER1_type 13 94 -166 237 319 43 0 chr20 2035701 2035795 -70118087 + MER112 DNA MER1_type 69 166 -94 334 272 26 26 chr20 2035854 2035968 -70117914 + MER112 DNA MER1_type 147 260 0 420 275 99 22 chr20 2035977 2036159 -70117723 - L3 LINE CR1 -74 1503 1308 778 248 53 46 chr20 2036787 2037069 -70116813 - L2 LINE L2 0 3272 2989 431 237 21 0 chr20 2037637 2037734 -70116148 - MER45 DNA AcHobo -56 122 24 426 331 69 0 chr20 2037820 2037995 -70115887 - MIR3 SINE MIR -16 192 6 549 293 214 8 chr20 2038351 2038743 -70115139 + L2 LINE L2 2841 3313 0 288 314 7 51 chr20 2038756 2038893 -70114989 - L2 LINE L2 -3 3310 3180 2204 97 3 0 chr20 2039025 2039323 -70114559 - AluSg SINE Alu -11 299 1 188 176 0 0 chr20 2039772 2039806 -70114076 + L2 LINE L2 3028 3061 -211 399 98 0 0 chr20 2039864 2039925 -70113957 + (TCCA)n Simple_repeat Simple_repeat 1 61 0 269 238 63 0 chr20 2039949 2040012 -70113870 - L2 LINE L2 -68 3204 3138 467 194 7 57 chr20 2040121 2040255 -70113627 + MER3 DNA MER1_type 29 151 -58 251 224 26 53 chr20 2040458 2040534 -70113348 - MIR SINE MIR -90 118 45 197 306 266 8 chr20 2040610 2040734 -70113148 - L2 LINE L2 -1 3271 3116 283 212 204 9 chr20 2041051 2041164 -70112718 - MIR SINE MIR -96 166 32 407 179 36 0 chr20 2041372 2041456 -70112426 + MIR SINE MIR 70 156 -106 562 266 113 8 chr20 2041473 2041729 -70112153 + L2 LINE L2 2830 3112 -201 205 185 130 0 chr20 2041988 2042042 -70111840 + L2 LINE L2 3193 3253 -60 211 173 192 0 chr20 2042963 2043015 -70110867 - MIR SINE MIR -196 66 5 199 139 0 56 chr20 2043213 2043249 -70110633 + MER5A DNA MER1_type 156 189 0 561 231 51 19 chr20 2043344 2043500 -70110382 - MIR SINE MIR 0 262 102 258 306 102 27 chr20 2044642 2044789 -70109093 + MIR SINE MIR 1 158 -104 573 282 151 17 chr20 2044812 2045569 -70108313 - L2 LINE L2 -2 3311 2444 185 182 23 0 chr20 2045839 2045883 -70107999 - MIR SINE MIR -104 104 60 220 136 23 0 chr20 2045974 2046018 -70107864 + L2 LINE L2 2922 2966 -348 291 353 98 27 chr20 2046878 2047102 -70106780 - L2 LINE L2 -17 3255 3016 277 286 107 9 chr20 2047111 2047223 -70106659 - L2 LINE L2 -2 3311 3189 285 89 0 0 chr20 2047366 2047411 -70106471 + (GGGA)n Simple_repeat Simple_repeat 4 48 0 2313 79 0 28 chr20 2047554 2047871 -70106011 - AluSx SINE Alu -4 308 1 327 259 5 54 chr20 2048897 2049082 -70104800 + (CA)n Simple_repeat Simple_repeat 1 176 0 221 314 12 0 chr20 2049138 2049224 -70104658 + (CA)n Simple_repeat Simple_repeat 2 88 0 368 275 169 0 chr20 2049535 2049695 -70104187 + L3 LINE CR1 1391 1577 0 429 247 31 21 chr20 2049715 2049909 -70103973 - Charlie7 DNA MER1_type 0 2612 2417 563 304 72 36 chr20 2049931 2050181 -70103701 - MIR SINE MIR 0 262 4 490 220 10 0 chr20 2050363 2050463 -70103419 + MER5A DNA MER1_type 9 109 -80 548 265 309 8 chr20 2050674 2051124 -70102758 + L2 LINE L2 2725 3307 -6 246 213 118 88 chr20 2051514 2051650 -70102232 + MIR SINE MIR 53 192 -70 198 322 157 9 chr20 2051741 2051856 -70102026 + MIR3 SINE MIR 14 145 -63 1302 250 152 11 chr20 2052296 2053096 -70100786 - L2 LINE L2 -1 3312 2394 188 33 0 33 chr20 2053137 2053167 -70100715 + (TCTCTG)n Simple_repeat Simple_repeat 2 30 0 277 219 287 1 chr20 2053186 2053310 -70100572 - MIR SINE MIR -51 157 1 637 309 36 5 chr20 2053537 2053760 -70100122 + MIR SINE MIR 13 242 -20 1032 215 0 0 chr20 2054244 2054430 -70099452 + MER5A DNA MER1_type 1 186 -3 972 191 0 5 chr20 2054591 2054780 -70099102 - AluJo SINE Alu -2 310 123 318 217 191 9 chr20 2054861 2054976 -70098906 - MIR SINE MIR -51 211 76 408 266 62 23 chr20 2055023 2055200 -70098682 - L2 LINE L2 -119 3194 3011 221 286 36 0 chr20 2055197 2055253 -70098629 + MIR3 SINE MIR 109 166 -42 * 183 270 234 27 chr20 2055760 2055871 -70098011 + MIR SINE MIR 85 218 -44 218 258 93 31 chr20 2055980 2056077 -70097805 - MIR SINE MIR -110 152 50 503 279 156 8 chr20 2056121 2056358 -70097524 - L2 LINE L2 -580 2734 2463 719 237 98 44 chr20 2056394 2056668 -70097214 + L2 LINE L2 3025 3313 0 363 268 102 13 chr20 2057256 2057413 -70096469 + L2 LINE L2 2618 2788 -526 297 274 244 17 chr20 2057503 2057733 -70096149 + L2 LINE L2 2944 3225 -88 550 266 136 14 chr20 2057832 2058046 -70095836 - MIR SINE MIR -5 257 18 300 279 117 9 chr20 2058152 2058263 -70095619 + MIR3 SINE MIR 33 155 -53 32 0 0 0 chr20 2058943 2058975 -70094907 + GC_rich Low_complexity Low_complexity 1 32 0 237 219 0 16 chr20 2059201 2059265 -70094617 + (CGGGG)n Simple_repeat Simple_repeat 1 63 0 21 36 0 0 chr20 2059333 2059361 -70094521 + GC_rich Low_complexity Low_complexity 1 28 0 28 71 0 0 chr20 2059375 2059431 -70094451 + GC_rich Low_complexity Low_complexity 1 56 0 23 78 0 0 chr20 2059646 2059697 -70094185 + GC_rich Low_complexity Low_complexity 1 51 0 275 283 7 36 chr20 2059768 2059945 -70093937 + CT-rich Low_complexity Low_complexity 6 268 0 22 0 0 0 chr20 2059976 2059998 -70093884 + GC_rich Low_complexity Low_complexity 1 22 0 28 29 0 0 chr20 2060147 2060182 -70093700 + GC_rich Low_complexity Low_complexity 1 35 0 365 146 195 0 chr20 2060347 2060429 -70093453 - MIR SINE MIR -69 139 42 193 269 0 19 chr20 2063232 2063284 -70090598 - MIR SINE MIR -60 148 98 257 296 0 0 chr20 2063838 2063909 -70089973 + L2 LINE L2 2704 2774 -540 233 345 0 23 chr20 2064062 2064149 -70089733 - MER103 DNA DNA -67 99 15 241 292 17 50 chr20 2064244 2064364 -70089518 + L2 LINE L2 2920 3035 -237 501 297 139 5 chr20 2064421 2064623 -70089259 + MIR SINE MIR 34 262 0 2233 65 41 0 chr20 2064786 2065078 -70088804 - AluSp SINE Alu -4 309 6 372 333 58 24 chr20 2065529 2065736 -70088146 - MIR SINE MIR -43 219 6 2386 90 0 0 chr20 2065854 2066165 -70087717 - AluSx SINE Alu -1 311 1 317 304 37 30 chr20 2066965 2067100 -70086782 - MIR SINE MIR -71 191 56 1095 253 104 23 chr20 2067160 2067424 -70086458 - L2 LINE L2 -4 3309 2993 2411 87 0 0 chr20 2067424 2067736 -70086146 + AluSx SINE Alu 1 312 0 1095 253 104 23 chr20 2067736 2067914 -70085968 - L2 LINE L2 -320 2993 2831 616 217 53 16 chr20 2067929 2068132 -70085750 - MIR SINE MIR -15 247 40 186 286 60 0 chr20 2068127 2068211 -70085671 + L2 LINE L2 2606 2694 -620 * 830 310 111 18 chr20 2068265 2068723 -70085159 + L2 LINE L2 2812 3312 -1 243 390 8 8 chr20 2069170 2069293 -70084589 + MIR SINE MIR 70 192 -70 210 321 30 30 chr20 2069384 2069515 -70084367 + MIR3 SINE MIR 64 194 -14 517 255 22 33 chr20 2069593 2069777 -70084105 + MIR SINE MIR 31 212 -50 257 206 221 59 chr20 2070029 2070165 -70083717 + MIR SINE MIR 34 191 -71 243 158 0 0 chr20 2070302 2070340 -70083542 + MIR SINE MIR 112 149 -59 392 285 162 39 chr20 2070766 2070945 -70082937 - MIR SINE MIR -17 245 45 585 297 151 34 chr20 2070957 2071593 -70082289 - L2 LINE L2 -39 3274 2461 235 273 191 0 chr20 2071659 2071769 -70082113 - MIR SINE MIR -115 147 17 440 328 119 25 chr20 2072181 2072501 -70081381 + L2 LINE L2 2923 3272 0 240 269 27 20 chr20 2072989 2073138 -70080744 + (CA)n Simple_repeat Simple_repeat 1 150 0 2298 94 0 0 chr20 2074194 2074491 -70079391 + AluSq SINE Alu 1 297 -16 375 226 0 12 chr20 2074590 2074674 -70079208 + L2 LINE L2 1912 1994 -1320 233 262 135 48 chr20 2074786 2074912 -70078970 + L2 LINE L2 3146 3282 -31 428 178 33 0 chr20 2075229 2075319 -70078563 - L2 LINE L2 -7 3306 3214 310 327 115 62 chr20 2075400 2075626 -70078256 - L1ME4a LINE L1 -11 6110 5873 352 303 101 0 chr20 2076017 2076136 -70077746 + L1ME4a LINE L1 5985 6115 -6 233 331 46 13 chr20 2076138 2076289 -70077593 - L1ME4a LINE L1 -242 5879 5724 259 333 0 0 chr20 2076378 2076456 -70077426 - L1ME4a LINE L1 -2214 5594 5517 351 322 68 11 chr20 2078855 2079032 -70074850 - MIR SINE MIR -48 214 28 262 278 26 0 chr20 2079062 2079152 -70074730 - MIR SINE MIR -66 142 104 354 273 133 0 chr20 2079418 2079546 -70074336 + L2 LINE L2 2899 3043 -229 299 284 147 0 chr20 2079574 2079669 -70074213 + MIR SINE MIR 96 204 -58 292 309 0 12 chr20 2080271 2080352 -70073530 - MIR SINE MIR -116 146 67 268 173 158 0 chr20 2080404 2080475 -70073407 - MIR3 SINE MIR -50 158 77 193 304 0 0 chr20 2080525 2080571 -70073311 - L2 LINE L2 -2 3270 3225 413 308 64 6 chr20 2080959 2081115 -70072767 - MIR3 SINE MIR -8 200 36 684 304 84 0 chr20 2081331 2081594 -70072288 - L1MC4a LINE L1 -1957 5851 5567 253 299 73 36 chr20 2081670 2081807 -70072075 - MIR3 SINE MIR -66 142 1 348 274 110 24 chr20 2081899 2082063 -70071819 - MIR SINE MIR -82 180 3 808 131 8 0 chr20 2082131 2082253 -70071629 + AluSg/x SINE Alu 177 299 -11 303 330 61 0 chr20 2082738 2082853 -70071029 + MIR SINE MIR 98 219 -43 2013 96 12 52 chr20 2082882 2083206 -70070676 - AluSq SINE Alu -2 311 1 408 261 27 0 chr20 2083223 2083334 -70070548 + MIR SINE MIR 79 192 -70 316 240 108 39 chr20 2083383 2083512 -70070370 + MIR SINE MIR 84 221 -41 686 295 59 25 chr20 2083548 2083785 -70070097 + MIR SINE MIR 14 258 -4 532 274 65 18 chr20 2083866 2084034 -70069848 - MER5B DNA MER1_type -2 176 1 227 211 0 0 chr20 2084689 2084727 -70069155 - L2 LINE L2 -18 3254 3217 199 256 132 23 chr20 2084785 2084914 -70068968 + MIR SINE MIR 108 250 -12 222 286 57 14 chr20 2085536 2085606 -70068276 - MIR SINE MIR -64 198 126 222 341 85 0 chr20 2085835 2085964 -70067918 + MIR SINE MIR 28 167 -95 182 356 0 0 chr20 2086789 2086848 -70067034 - MIR SINE MIR 0 262 204 350 294 27 76 chr20 2087404 2087588 -70066294 - HAL1b LINE L1 -5 1343 1169 301 342 76 30 chr20 2087609 2087846 -70066036 - L1MC4a LINE L1 -1911 5897 5650 399 281 89 20 chr20 2088407 2088553 -70065329 + MIR3 SINE MIR 32 187 -21 344 254 136 9 chr20 2088539 2088649 -70065233 + L2 LINE L2 3147 3270 -2 * 474 18 0 0 chr20 2088663 2088718 -70065164 + (TTGG)n Simple_repeat Simple_repeat 2 56 0 406 256 78 67 chr20 2088721 2088901 -70064981 - MIR SINE MIR -76 186 5 254 226 122 43 chr20 2089980 2090095 -70063787 + MIR SINE MIR 139 262 0 208 171 24 0 chr20 2090223 2090264 -70063618 + (TG)n Simple_repeat Simple_repeat 1 42 0 347 315 162 25 chr20 2090306 2090503 -70063379 + MIR SINE MIR 29 252 -10 779 259 37 5 chr20 2091282 2091471 -70062411 - MIR SINE MIR -21 241 47 277 281 16 0 chr20 2091585 2091649 -70062233 + MIR SINE MIR 53 117 -91 263 286 25 67 chr20 2092090 2092209 -70061673 - MIR3 SINE MIR -86 122 9 266 311 151 8 chr20 2092952 2093071 -70060811 - L2 LINE L2 -1 3271 3136 426 293 141 39 chr20 2093139 2093395 -70060487 - L2 LINE L2 -24 3289 3008 631 264 71 0 chr20 2093601 2093798 -70060084 - MER46C DNA MER2_type -109 229 19 928 239 137 0 chr20 2093818 2094102 -70059780 - L2 LINE L2 -506 2808 2486 229 129 0 0 chr20 2094811 2094842 -70059040 - MER91 DNA MER1_type -77 63 33 269 383 31 25 chr20 2094933 2095129 -70058753 + L2 LINE L2 3076 3272 0 2420 89 3 13 chr20 2095268 2095584 -70058298 - AluSp SINE Alu 0 313 1 608 251 18 127 chr20 2095672 2095803 -70058079 - MIR SINE MIR 0 262 177 853 158 152 0 chr20 2095803 2095967 -70057915 - MER5A DNA MER1_type 0 189 1 608 251 18 127 chr20 2095967 2096118 -70057764 - MIR SINE MIR -85 177 11 196 359 111 0 chr20 2096631 2096748 -70057134 - L2 LINE L2 -1 3271 3142 297 0 0 0 chr20 2096748 2096781 -70057101 + (TTCA)n Simple_repeat Simple_repeat 1 33 0 905 290 112 22 chr20 2096782 2097630 -70056252 - L2 LINE L2 -14 3299 2364 495 301 58 52 chr20 2098970 2099315 -70054567 - L1MC/D LINE L1 -2141 5667 5321 213 197 127 28 chr20 2099661 2099732 -70054150 + MER91C DNA MER1_type 33 110 -30 207 250 220 10 chr20 2100414 2100514 -70053368 - L2 LINE L2 -4 3309 3189 345 306 147 17 chr20 2100602 2100786 -70053096 + MIR SINE MIR 3 205 -41 1072 195 49 26 chr20 2101001 2101227 -70052655 - MIR SINE MIR 0 262 32 193 320 0 0 chr20 2101381 2101431 -70052451 + L2 LINE L2 3223 3272 0 426 53 0 0 chr20 2102662 2102719 -70051163 + (CCA)n Simple_repeat Simple_repeat 2 58 0 232 162 0 0 chr20 2103475 2103512 -70050370 + MIR SINE MIR 116 152 -110 21 0 0 0 chr20 2104306 2104327 -70049555 + AT_rich Low_complexity Low_complexity 1 21 0 371 313 114 0 chr20 2104816 2104992 -70048890 + MIR SINE MIR 48 243 -19 205 333 164 24 chr20 2105045 2105210 -70048672 + MIR SINE MIR 69 256 -6 278 330 210 10 chr20 2105287 2105487 -70048395 - MIR SINE MIR -16 246 7 512 279 134 0 chr20 2105552 2105724 -70048158 - MIR SINE MIR -32 230 36 337 331 70 7 chr20 2105743 2105885 -70047997 - MIR SINE MIR -64 198 48 604 247 22 60 chr20 2106604 2106786 -70047096 - MIR SINE MIR -19 243 69 671 221 137 5 chr20 2107124 2107328 -70046554 + L1ME3 LINE L1 5926 6156 -6 416 325 35 6 chr20 2107685 2107854 -70046028 + MIR SINE MIR 77 250 -12 207 175 0 0 chr20 2107854 2107894 -70045988 + (CA)n Simple_repeat Simple_repeat 1 40 0 286 325 104 32 chr20 2108293 2108447 -70045435 - MIR SINE MIR -24 238 74 242 339 64 0 chr20 2108432 2108541 -70045341 - L2 LINE L2 -2 3311 3196 * 1008 244 60 52 chr20 2108628 2109010 -70044872 - LTR37B LTR ERV1 -78 390 6 229 336 27 55 chr20 2109030 2109176 -70044706 - L2 LINE L2 -200 3072 2931 * 256 333 113 0 chr20 2109155 2109332 -70044550 + L2 LINE L2 2774 2970 -344 194 369 77 18 chr20 2109417 2109585 -70044297 + L2 LINE L2 3120 3297 -16 210 222 17 8 chr20 2109589 2109706 -70044176 + (TGGA)n Simple_repeat Simple_repeat 2 119 0 227 200 36 18 chr20 2109706 2109761 -70044121 + GA-rich Low_complexity Low_complexity 2 57 0 1514 131 120 29 chr20 2110795 2111069 -70042813 - AluJo SINE Alu -11 301 3 758 165 139 34 chr20 2111078 2111287 -70042595 + L1ME1 LINE L1 5928 6161 -5 769 259 47 14 chr20 2111309 2111521 -70042361 - MIR SINE MIR 0 262 44 186 320 20 0 chr20 2111548 2111598 -70042284 - MIR SINE MIR -111 97 47 218 305 38 30 chr20 2112405 2112519 -70041363 - MIR SINE MIR -87 121 8 828 264 9 27 chr20 2112564 2112784 -70041098 + MIR SINE MIR 32 247 -15 261 0 0 0 chr20 2112925 2112954 -70040928 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 443 256 128 95 chr20 2112994 2113116 -70040766 - L2 LINE L2 -74 3239 3122 1656 176 6 61 chr20 2113116 2113446 -70040436 + AluSx SINE Alu 1 312 0 443 256 128 95 chr20 2113446 2113628 -70040254 - L2 LINE L2 -191 3122 2925 226 278 0 14 chr20 2113997 2114069 -70039813 - L1MC/D LINE L1 -2031 5777 5707 2279 129 0 0 chr20 2115060 2115370 -70038512 - AluSx SINE Alu -2 310 1 380 332 94 47 chr20 2115441 2115676 -70038206 - MIR SINE MIR -2 260 15 613 165 112 41 chr20 2115984 2116154 -70037728 + MER53 DNA DNA 8 189 0 246 172 86 0 chr20 2116573 2116631 -70037251 + L2 LINE L2 2992 3054 -218 199 122 41 0 chr20 2116742 2116791 -70037091 + GA-rich Low_complexity Low_complexity 2 52 0 916 263 4 18 chr20 2116952 2117180 -70036702 + MIR SINE MIR 8 232 -30 361 259 184 49 chr20 2117417 2117602 -70036280 + MIR SINE MIR 37 246 -16 937 136 6 6 chr20 2117794 2117963 -70035919 + (GGAA)n Simple_repeat Simple_repeat 4 172 0 264 160 20 0 chr20 2117969 2118019 -70035863 + GA-rich Low_complexity Low_complexity 2 52 0 204 314 221 0 chr20 2118663 2118749 -70035133 - L2 LINE L2 -18 3295 3191 443 273 99 17 chr20 2118779 2118892 -70034990 + MER5A DNA MER1_type 4 137 -52 2492 37 40 3 chr20 2118892 2119191 -70034691 - AluY SINE Alu -1 310 1 443 273 99 17 chr20 2119191 2119249 -70034633 + MER5A DNA MER1_type 137 189 0 2127 133 7 7 chr20 2119342 2119644 -70034238 - AluSx SINE Alu -10 302 1 243 254 87 14 chr20 2119707 2119845 -70034037 - L1ME4a LINE L1 -29 6092 5945 2877 163 160 26 chr20 2119883 2120467 -70033415 + LTR48 LTR ERV1 1 694 -93 1690 193 3 25 chr20 2120467 2120783 -70033099 - AluJo SINE Alu -3 309 1 2877 163 160 26 chr20 2120783 2120892 -70032990 + LTR48 LTR ERV1 694 787 0 1018 166 44 0 chr20 2120898 2121079 -70032803 - MER5A DNA MER1_type 0 189 1 371 265 122 41 chr20 2121113 2121260 -70032622 + MIR SINE MIR 52 210 -52 763 281 83 17 chr20 2121389 2121730 -70032152 - L1ME4a LINE L1 -405 5716 5391 204 371 0 0 chr20 2121997 2122067 -70031815 - L2 LINE L2 -2 3270 3201 204 263 0 35 chr20 2122188 2122245 -70031637 + MIR SINE MIR 31 85 -177 3283 240 41 32 chr20 2122524 2122799 -70031083 + L1MEc LINE L1 247 518 -6089 1281 177 14 140 chr20 2122799 2122844 -70031038 + MLT1A1 LTR MaLR 1 50 -315 1719 182 10 23 chr20 2122844 2123146 -70030736 + AluJo SINE Alu 1 298 -14 1281 177 14 140 chr20 2123146 2123513 -70030369 + MLT1A1 LTR MaLR 50 361 -4 3283 240 41 32 chr20 2123513 2124355 -70029527 + L1MEc LINE L1 518 1455 -5152 236 230 27 0 chr20 2124392 2124466 -70029416 + L1MC4 LINE L1 6617 6692 -1350 180 0 0 0 chr20 2124474 2124494 -70029388 + (TA)n Simple_repeat Simple_repeat 2 21 0 302 200 75 0 chr20 2124507 2124587 -70029295 + L1MEc LINE L1 1455 1540 -4886 507 286 8 28 chr20 2124681 2124929 -70028953 + L1MEc LINE L1 1417 1659 -4767 1365 146 4 40 chr20 2124929 2125155 -70028727 + AluJb SINE Alu 87 304 -8 2770 192 25 27 chr20 2125156 2125829 -70028053 + L1MEc LINE L1 1849 2520 -4087 201 228 152 25 chr20 2126233 2126312 -70027570 - L3 LINE CR1 -1044 533 445 449 332 40 65 chr20 2126397 2126644 -70027238 - L2 LINE L2 0 3272 3032 360 279 89 32 chr20 2127460 2127650 -70026232 + L2 LINE L2 2840 3040 -232 246 231 0 0 chr20 2127899 2127964 -70025918 + GA-rich Low_complexity Low_complexity 1 65 0 285 247 12 0 chr20 2127974 2128055 -70025827 + (TGGA)n Simple_repeat Simple_repeat 4 85 0 314 284 6 0 chr20 2128073 2128249 -70025633 + (TGAA)n Simple_repeat Simple_repeat 4 180 0 23 0 0 0 chr20 2128269 2128292 -70025590 + AT_rich Low_complexity Low_complexity 1 23 0 415 216 0 0 chr20 2128409 2128483 -70025399 + L2 LINE L2 3240 3313 0 300 330 46 9 chr20 2128543 2128652 -70025230 + MIR SINE MIR 40 152 -56 3665 147 41 35 chr20 2128686 2129317 -70024565 - MER41B LTR ERV1 0 635 1 1570 177 126 49 chr20 2129533 2129963 -70023919 + MER31B LTR ERV1 2 464 -2 357 209 11 33 chr20 2130953 2131044 -70022838 - LTR16A1 LTR ERVL -128 329 241 950 290 21 39 chr20 2132352 2132622 -70021260 + MLT1J LTR MaLR 1 263 -248 2652 140 11 32 chr20 2132622 2133057 -70020825 + MSTB LTR MaLR 1 426 0 950 290 21 39 chr20 2133057 2133172 -70020710 + MLT1J LTR MaLR 263 379 -132 346 133 72 36 chr20 2133212 2133295 -70020587 + MLT1H LTR MaLR 38 123 -426 326 215 193 7 chr20 2133494 2133629 -70020253 + MLT1J LTR MaLR 382 541 -8 368 185 62 0 chr20 2133636 2133717 -70020165 + MLT1J LTR MaLR 389 474 -37 280 254 56 0 chr20 2134219 2134290 -70019592 + MIR SINE MIR 108 182 -80 522 276 45 49 chr20 2134396 2134581 -70019301 + L2 LINE L2 2830 3015 -298 2033 128 26 10 chr20 2134581 2134887 -70018995 - AluY SINE Alu 0 311 1 522 276 45 49 chr20 2134887 2134947 -70018935 + L2 LINE L2 3015 3074 -239 2193 146 39 3 chr20 2135010 2135402 -70018480 + L1MC2 LINE L1 5657 6088 -243 24 53 0 0 chr20 2135402 2135440 -70018442 + AT_rich Low_complexity Low_complexity 1 38 0 1107 191 103 39 chr20 2135459 2135714 -70018168 + L1MC2 LINE L1 6045 6282 -62 2144 108 21 0 chr20 2135714 2136000 -70017882 + AluSx SINE Alu 1 292 -20 1107 191 103 39 chr20 2136000 2136012 -70017870 + L1MC2 LINE L1 6282 6292 -52 2385 90 0 10 chr20 2136012 2136327 -70017555 - AluSq SINE Alu -1 312 6 1107 191 103 39 chr20 2136327 2136340 -70017542 + L1MC2 LINE L1 6292 6344 0 884 234 141 41 chr20 2136663 2137031 -70016851 - MER113 DNA MER1_type? -114 407 3 415 236 66 0 chr20 2137170 2137276 -70016606 + MER94 DNA DNA 2 114 -20 581 231 48 14 chr20 2138546 2138693 -70015189 + L2 LINE L2 2650 2801 -513 657 302 74 55 chr20 2138813 2139287 -70014595 + L2 LINE L2 2831 3313 0 186 125 62 0 chr20 2139390 2139422 -70014460 - MIR SINE MIR -112 150 117 455 285 44 7 chr20 2140421 2140558 -70013324 + L1ME3 LINE L1 6021 6162 0 555 268 91 25 chr20 2140693 2140891 -70012991 + MLT1K LTR MaLR 317 527 -61 345 265 140 7 chr20 2140986 2141122 -70012760 - MIR SINE MIR -89 173 20 292 259 70 49 chr20 2141303 2141446 -70012436 + Charlie8 DNA MER1_type 39 184 -2233 632 298 55 38 chr20 2141608 2141843 -70012039 + MLT1K LTR MaLR 25 263 -325 618 250 97 20 chr20 2141869 2142065 -70011817 + MLT1K LTR MaLR 320 530 -58 403 321 121 38 chr20 2142160 2142400 -70011482 + L3 LINE CR1 1311 1570 -7 602 283 86 54 chr20 2142408 2142687 -70011195 + L2 LINE L2 3024 3311 -2 658 269 90 0 chr20 2143076 2143232 -70010650 - MIR SINE MIR -12 250 81 279 0 0 0 chr20 2143315 2143346 -70010536 + (TG)n Simple_repeat Simple_repeat 2 32 0 249 33 0 0 chr20 2144733 2144763 -70009119 + (CTG)n Simple_repeat Simple_repeat 1 30 0 211 291 100 27 chr20 2145833 2145943 -70007939 - MIR3 SINE MIR -77 131 14 1918 146 0 0 chr20 2146339 2146660 -70007222 + AluSx SINE Alu 2 322 0 1868 154 0 0 chr20 2146673 2146966 -70006916 + AluSx SINE Alu 5 297 -15 348 308 110 14 chr20 2146985 2147131 -70006751 - MIR3 SINE MIR -45 163 4 199 224 35 17 chr20 2147914 2147972 -70005910 - MIR SINE MIR -63 145 87 333 314 152 21 chr20 2147989 2148180 -70005702 - MIR SINE MIR -19 243 28 675 281 62 31 chr20 2148506 2148766 -70005116 + L2 LINE L2 2828 3095 -177 834 275 83 54 chr20 2148870 2149277 -70004605 + L2 LINE L2 2895 3313 0 1922 151 0 0 chr20 2149312 2149604 -70004278 + AluSx SINE Alu 2 293 -19 398 272 49 22 chr20 2150216 2150362 -70003520 - MIR SINE MIR -50 212 64 722 278 58 0 chr20 2150802 2151007 -70002875 - MIR SINE MIR -44 218 2 190 297 119 0 chr20 2151084 2151185 -70002697 + L2 LINE L2 2643 2755 -559 503 311 42 32 chr20 2151234 2151424 -70002458 - MIR SINE MIR -3 259 68 426 232 101 116 chr20 2151489 2151696 -70002186 + L2 LINE L2 2902 3105 -167 258 322 91 10 chr20 2151738 2151937 -70001945 - L2 LINE L2 -367 2947 2733 279 0 0 0 chr20 2151943 2151974 -70001908 + (TGAA)n Simple_repeat Simple_repeat 4 34 0 414 248 0 44 chr20 2152047 2152160 -70001722 + Charlie8 DNA MER1_type 87 194 -2223 655 275 66 37 chr20 2152355 2152572 -70001310 + MIR SINE MIR 16 241 -21 482 306 35 30 chr20 2152780 2152979 -70000903 - MIR SINE MIR -3 259 60 497 196 9 54 chr20 2153505 2153617 -70000265 + MLT2D LTR ERVL 307 413 -1 704 222 7 7 chr20 2153618 2153762 -70000120 + MER58B DNA MER1_type 194 337 -4 257 322 30 26 chr20 2154375 2154511 -69999371 - MIR SINE MIR -61 147 19 205 266 119 46 chr20 2154621 2154730 -69999152 - MIR SINE MIR -90 172 56 283 343 56 11 chr20 2154777 2154955 -69998927 - MIR SINE MIR -37 225 40 303 322 0 0 chr20 2155435 2155628 -69998254 + GA-rich Low_complexity Low_complexity 1 193 0 341 272 20 20 chr20 2155642 2155789 -69998093 + GA-rich Low_complexity Low_complexity 1 147 0 653 266 99 21 chr20 2156753 2156945 -69996937 - MIR SINE MIR -8 254 48 203 272 49 37 chr20 2156939 2157020 -69996862 - L2 LINE L2 -41 3272 3191 * 189 0 0 0 chr20 2157747 2157768 -69996114 + (T)n Simple_repeat Simple_repeat 1 21 0 263 272 52 35 chr20 2159060 2159089 -69994793 + (CAGAGA)n Simple_repeat Simple_repeat 4 31 -148 204 40 0 0 chr20 2159089 2159114 -69994768 + (GA)n Simple_repeat Simple_repeat 2 26 0 263 272 52 35 chr20 2159114 2159257 -69994625 + (CAGAGA)n Simple_repeat Simple_repeat 31 179 0 * 327 330 0 0 chr20 2159157 2159340 -69994542 + GA-rich Low_complexity Low_complexity 1 183 0 459 303 52 7 chr20 2159917 2160072 -69993810 - MIR SINE MIR -73 189 28 448 313 49 0 chr20 2160328 2160491 -69993391 + MIR SINE MIR 49 219 -43 333 0 0 0 chr20 2161460 2161497 -69992385 + (CA)n Simple_repeat Simple_repeat 2 38 0 188 268 61 61 chr20 2161633 2161715 -69992167 + MIR SINE MIR 37 118 -144 649 309 36 0 chr20 2161959 2162211 -69991671 - MIR SINE MIR 0 262 2 183 205 0 0 chr20 2162513 2162552 -69991330 + CT-rich Low_complexity Low_complexity 2 40 0 681 293 40 63 chr20 2162556 2162935 -69990947 - L2 LINE L2 -5 3267 2898 996 263 186 21 chr20 2162975 2163115 -69990767 + L2 LINE L2 2553 2669 -644 2217 120 0 0 chr20 2163115 2163424 -69990458 + AluSq SINE Alu 1 309 -4 996 263 186 21 chr20 2163424 2163924 -69989958 + L2 LINE L2 2669 3311 -2 214 304 59 29 chr20 2163930 2164032 -69989850 - L2 LINE L2 -413 2901 2797 242 333 128 55 chr20 2164148 2164367 -69989515 - L2 LINE L2 -51 3221 2987 1939 207 30 62 chr20 2164403 2164607 -69989275 + L1MB4 LINE L1 5495 5704 -476 201 74 0 0 chr20 2164607 2164634 -69989248 + (CAT)n Simple_repeat Simple_repeat 1 27 0 390 227 0 0 chr20 2164637 2164703 -69989179 - AluJ/FRAM SINE Alu -16 286 221 716 188 8 0 chr20 2164710 2164857 -69989025 - FLAM_C SINE Alu 0 148 1 1939 207 30 62 chr20 2164857 2165267 -69988615 + L1MB4 LINE L1 5712 6096 -84 673 301 55 17 chr20 2165341 2165577 -69988305 - MIR SINE MIR -6 256 12 509 281 69 31 chr20 2165628 2165870 -69988012 - MIR SINE MIR -13 249 3 685 262 109 9 chr20 2166169 2166390 -69987492 - MIR SINE MIR 0 262 20 398 335 51 51 chr20 2166695 2166970 -69986912 - L2 LINE L2 -4 3268 2994 254 383 17 0 chr20 2167410 2167525 -69986357 - LTR67 LTR ERVL -361 196 80 297 259 177 13 chr20 2167742 2167900 -69985982 - MIR3 SINE MIR -19 189 6 543 280 64 13 chr20 2167985 2168142 -69985740 + MIR SINE MIR 20 184 -78 202 369 6 0 chr20 2168471 2168631 -69985251 + (CA)n Simple_repeat Simple_repeat 2 162 0 207 0 0 0 chr20 2168895 2168918 -69984964 + (TC)n Simple_repeat Simple_repeat 2 24 0 194 289 18 97 chr20 2169256 2169350 -69984532 + MIR SINE MIR 49 133 -75 975 227 80 17 chr20 2169350 2169588 -69984294 + MIR SINE MIR 2 254 -8 1232 288 107 11 chr20 2169663 2170101 -69983781 + L2 LINE L2 2834 3313 0 189 204 20 20 chr20 2170757 2170806 -69983076 - L2 LINE L2 0 3272 3224 411 317 10 0 chr20 2171048 2171152 -69982730 + L2 LINE L2 3168 3272 0 370 291 101 19 chr20 2171157 2171315 -69982567 - MIR SINE MIR -77 185 15 283 287 82 66 chr20 2171377 2171499 -69982383 + MIR3 SINE MIR 56 179 -29 393 341 36 0 chr20 2172413 2172551 -69981331 + MIR3 SINE MIR 21 163 -45 1141 223 125 19 chr20 2172561 2173037 -69980845 - MLT1G LTR MaLR -2 593 1 420 299 105 83 chr20 2173119 2173629 -69980253 + L2 LINE L2 2750 3267 -5 705 322 110 45 chr20 2174039 2174945 -69978937 - L2 LINE L2 -35 3237 2268 223 368 128 16 chr20 2175176 2175301 -69978581 + L3 LINE CR1 1422 1560 -17 236 203 68 0 chr20 2175369 2175428 -69978454 + MIR3 SINE MIR 119 181 -27 355 313 201 0 chr20 2175435 2175713 -69978169 + L2 LINE L2 1872 2205 -1109 438 20 0 0 chr20 2175921 2175972 -69977910 + (TC)n Simple_repeat Simple_repeat 2 52 0 4583 226 55 55 chr20 2176171 2176999 -69976883 + L1ME1 LINE L1 785 1612 -4794 1616 204 0 0 chr20 2176999 2177288 -69976594 + AluJo SINE Alu 1 289 -23 4583 226 55 55 chr20 2177288 2177677 -69976205 + L1ME1 LINE L1 1612 2000 -4406 2021 129 0 16 chr20 2177677 2177994 -69975888 + AluSx SINE Alu 1 312 0 4583 226 55 55 chr20 2177994 2179816 -69974066 + L1ME1 LINE L1 2000 3798 -2608 6450 159 35 9 chr20 2179839 2180182 -69973700 + Tigger3b DNA MER2_type 1 334 -2694 2348 35 3 7 chr20 2180182 2180523 -69973359 + AluY SINE Alu 1 311 0 6450 159 35 9 chr20 2180523 2180873 -69973009 + Tigger3b DNA MER2_type 334 673 -2355 2212 91 10 3 chr20 2180873 2181182 -69972700 + AluSp SINE Alu 1 311 -2 6450 159 35 9 chr20 2181182 2181687 -69972195 + Tigger3b DNA MER2_type 673 1231 0 261 167 0 0 chr20 2181708 2181762 -69972120 + (CA)n Simple_repeat Simple_repeat 1 54 0 5274 226 81 12 chr20 2181774 2183452 -69970430 + L1ME1 LINE L1 4052 5827 -599 859 286 71 15 chr20 2183461 2183800 -69970082 + L1ME1 LINE L1 6019 6376 -50 1048 209 136 33 chr20 2183840 2184171 -69969711 + HAL1b LINE L1 438 802 -546 1076 157 0 40 chr20 2184172 2184370 -69969512 + AluJo SINE Alu 84 273 -39 584 250 56 10 chr20 2184393 2184589 -69969293 + HAL1b LINE L1 792 996 -352 * 1240 194 17 35 chr20 2184580 2184868 -69969014 - L1MD3 LINE L1 -1 7994 7712 319 250 93 58 chr20 2184926 2185098 -69968784 - MLT1J LTR MaLR -331 180 3 208 385 16 0 chr20 2185140 2185262 -69968620 - L2 LINE L2 -747 2567 2444 374 175 10 97 chr20 2185379 2185482 -69968400 - MIR SINE MIR 0 262 169 340 291 0 0 chr20 2185487 2185566 -69968316 + L2 LINE L2 3219 3297 -16 265 200 0 18 chr20 2185591 2185646 -69968236 - MIR SINE MIR -112 150 97 574 286 127 55 chr20 2185804 2186098 -69967784 + L2 LINE L2 2776 3121 -192 2310 55 0 0 chr20 2186098 2186414 -69967468 - AluY SINE Alu 0 311 1 574 286 127 55 chr20 2186414 2186623 -69967259 + L2 LINE L2 3121 3313 0 191 258 0 31 chr20 2186629 2186757 -69967125 + (TGGA)n Simple_repeat Simple_repeat 4 127 0 271 287 22 44 chr20 2187355 2187491 -69966391 - L2 LINE L2 -4 3268 3136 532 239 71 92 chr20 2187508 2187747 -69966135 + MIR SINE MIR 14 247 -15 705 238 26 43 chr20 2187766 2187997 -69965885 - MIR SINE MIR -4 258 32 652 255 22 11 chr20 2188411 2188595 -69965287 - MIR SINE MIR -67 195 10 254 287 66 30 chr20 2188594 2188761 -69965121 - MIR SINE MIR -39 223 51 * 209 263 53 0 chr20 2189625 2189701 -69964181 + MER5B DNA MER1_type 52 131 -47 250 267 0 81 chr20 2189778 2189864 -69964018 + L2 LINE L2 3026 3104 -168 256 241 0 0 chr20 2190328 2190386 -69963496 + MLT1K LTR MaLR 196 253 -335 401 87 43 0 chr20 2190403 2190472 -69963410 - L1MA8 LINE L1 -2 6289 6218 462 168 32 0 chr20 2190584 2190678 -69963204 - MER2 DNA MER2_type -139 206 110 7904 158 101 20 chr20 2190678 2192223 -69961659 - MER52A LTR ERV1 0 1755 1 517 214 8 26 chr20 2192221 2192241 -69961641 - MER2 DNA MER2_type -230 115 96 * 1391 177 79 37 chr20 2192241 2192569 -69961313 + MER2 DNA MER2_type 2 343 -1 517 214 8 26 chr20 2192569 2192665 -69961217 - MER2 DNA MER2_type -249 96 1 3318 142 25 30 chr20 2192665 2193258 -69960624 - L1MA8 LINE L1 -70 6221 5632 487 297 38 71 chr20 2193334 2193600 -69960282 + MLT1K LTR MaLR 329 585 -3 1812 247 77 38 chr20 2193963 2194522 -69959360 - MLT1G LTR MaLR 0 590 10 1226 250 56 22 chr20 2194657 2195017 -69958865 - MLT1K LTR MaLR -1 587 216 813 276 99 38 chr20 2195068 2195535 -69958347 - L1ME4a LINE L1 -204 5917 5417 2330 96 0 7 chr20 2195535 2195838 -69958044 - AluSc SINE Alu -8 301 1 813 276 99 38 chr20 2195838 2195867 -69958015 - L1ME4a LINE L1 -704 5417 5391 279 198 49 49 chr20 2196590 2196671 -69957211 - MIR SINE MIR -95 167 87 270 0 0 0 chr20 2196895 2196925 -69956957 + (CA)n Simple_repeat Simple_repeat 1 30 0 601 274 87 10 chr20 2197350 2197558 -69956324 + MLT1K LTR MaLR 363 586 -2 715 312 64 11 chr20 2197706 2197988 -69955894 + HAL1 LINE L1 32 328 -2179 373 202 65 40 chr20 2198090 2198214 -69955668 + HAL1 LINE L1 615 741 -1766 880 248 103 78 chr20 2198402 2199031 -69954851 + L1MC4 LINE L1 7168 7808 0 539 248 35 0 chr20 2199080 2199221 -69954661 + MIR SINE MIR 91 236 -26 234 264 178 61 chr20 2199460 2199657 -69954225 + MLT1K LTR MaLR 62 281 -307 714 241 92 11 chr20 2200193 2200438 -69953444 + MIR SINE MIR 6 262 0 194 304 98 0 chr20 2200467 2200579 -69953303 - L2 LINE L2 -13 3259 3137 311 269 46 8 chr20 2201018 2201148 -69952734 + (TGGA)n Simple_repeat Simple_repeat 4 138 0 408 223 62 0 chr20 2201164 2201482 -69952400 + (TGGA)n Simple_repeat Simple_repeat 1 337 0 414 300 132 14 chr20 2201608 2201828 -69952054 - MIR SINE MIR 0 262 17 181 278 256 0 chr20 2201890 2201980 -69951902 - L2 LINE L2 -215 3057 2945 748 227 20 10 chr20 2202127 2202330 -69951552 - MIR SINE MIR -56 206 2 362 292 18 9 chr20 2202612 2202725 -69951157 + MIR3 SINE MIR 81 194 -14 787 255 123 13 chr20 2203294 2203529 -69950353 + MIR SINE MIR 2 262 0 589 198 16 0 chr20 2203620 2203741 -69950141 + MER5A DNA MER1_type 44 166 -23 214 224 168 37 chr20 2203813 2203920 -69949962 + MIR SINE MIR 76 196 -66 230 238 167 0 chr20 2204139 2204223 -69949659 + MIR SINE MIR 94 191 -71 334 264 66 0 chr20 2204244 2204350 -69949532 - L2 LINE L2 -21 3251 3139 1886 143 7 32 chr20 2204572 2204880 -69949002 - AluSx SINE Alu -12 300 1 185 338 38 12 chr20 2204913 2204993 -69948889 - L2 LINE L2 -544 2770 2689 2247 103 0 3 chr20 2205000 2205292 -69948590 + AluSx SINE Alu 5 295 -17 877 236 41 5 chr20 2205301 2205496 -69948386 + L1ME1 LINE L1 5471 5672 -494 1645 145 44 29 chr20 2205496 2206037 -69947845 + LTR36 LTR ERV1 1 611 0 1755 206 7 119 chr20 2206041 2206586 -69947296 + L1ME1 LINE L1 5671 6154 -12 252 241 80 9 chr20 2206633 2206745 -69947137 - L2 LINE L2 -674 2640 2521 368 316 129 0 chr20 2207296 2207451 -69946431 + MIR3 SINE MIR 13 187 -21 937 205 0 11 chr20 2207715 2207900 -69945982 + MER3 DNA MER1_type 2 184 -25 1064 247 11 127 chr20 2207942 2208469 -69945413 + LTR41 LTR ERVL 1 466 -307 1104 206 24 69 chr20 2208512 2208834 -69945048 + LTR41 LTR ERVL 468 795 0 683 317 63 59 chr20 2209158 2210086 -69943796 + ERVL LTR ERVL 412 1344 -4310 * 1585 273 16 16 chr20 2210084 2210522 -69943360 + ERVL LTR ERVL 4883 5321 -438 1705 178 7 7 chr20 2210522 2210803 -69943079 + AluJb SINE Alu 1 281 -31 1569 248 79 60 chr20 2211229 2211761 -69942121 + MLT1E LTR MaLR 1 542 -51 3783 194 49 11 chr20 2211793 2212587 -69941295 - L1MB7 LINE L1 -54 6130 5267 2234 127 3 0 chr20 2212587 2212894 -69940988 - AluSq SINE Alu -5 308 1 3783 194 49 11 chr20 2212894 2213449 -69940433 - L1MB7 LINE L1 -917 5267 4734 1003 194 60 187 chr20 2213518 2214272 -69939610 + LTR41 LTR ERVL 6 663 -110 1685 162 20 37 chr20 2214464 2214760 -69939122 - AluJo SINE Alu -21 291 1 2332 106 6 0 chr20 2214771 2215082 -69938800 - AluSq SINE Alu 0 313 1 1390 250 142 7 chr20 2215168 2215584 -69938298 - LTR16C LTR ERVL 0 491 20 244 182 45 45 chr20 2215593 2215659 -69938223 + MIR SINE MIR 112 177 -85 272 265 154 0 chr20 2215858 2215994 -69937888 - MIR SINE MIR -102 160 4 620 179 9 0 chr20 2216684 2216787 -69937095 + MLT1J1 LTR MaLR 13 116 -330 620 240 137 6 chr20 2216787 2216970 -69936912 + MER63B DNA MER1_type 1 207 -229 1014 303 17 7 chr20 2217038 2217332 -69936550 - LTR16A LTR ERVL -32 418 122 342 282 9 9 chr20 2217398 2217508 -69936374 - MIR SINE MIR -85 177 68 364 232 9 27 chr20 2217655 2217767 -69936115 - MARNA DNA Mariner -170 416 307 295 240 44 12 chr20 2217933 2218024 -69935858 + MIR SINE MIR 61 152 -61 685 282 70 25 chr20 2218041 2218282 -69935600 + MIR SINE MIR 8 259 -3 1870 259 57 18 chr20 2218392 2218887 -69934995 - MLT1G1 LTR MaLR -9 586 73 378 260 30 0 chr20 2219240 2219340 -69934542 + MIR SINE MIR 90 192 -70 416 165 89 101 chr20 2219566 2219724 -69934158 + L1ME4a LINE L1 5955 6110 -11 324 70 0 0 chr20 2219726 2219769 -69934113 + (CA)n Simple_repeat Simple_repeat 2 44 0 316 269 112 14 chr20 2219842 2219994 -69933888 - MER20B DNA MER1_type 0 219 53 295 283 173 37 chr20 2219996 2220187 -69933695 + L1MC4 LINE L1 7800 8016 -26 2404 65 0 14 chr20 2220864 2221156 -69932726 + AluY SINE Alu 1 288 -23 252 185 0 19 chr20 2221160 2221214 -69932668 - L2 LINE L2 -13 3259 3207 1972 232 23 0 chr20 2221449 2221876 -69932006 + MER110 LTR ERV1 46 482 -9 301 276 163 0 chr20 2221890 2222013 -69931869 - MIR SINE MIR -23 239 97 5874 101 3 27 chr20 2222013 2222160 -69931722 + L1PA11 LINE L1 5329 5478 -696 1459 214 3 35 chr20 2222160 2222478 -69931404 + AluJb SINE Alu 1 308 -4 5874 101 3 27 chr20 2222478 2223189 -69930693 + L1PA11 LINE L1 5478 6167 -7 328 250 0 0 chr20 2223189 2223273 -69930609 - MIR SINE MIR -163 99 16 1690 251 135 15 chr20 2223295 2223820 -69930062 - MLT1G1 LTR MaLR -7 588 1 580 296 97 8 chr20 2224026 2224448 -69929434 + LTR33 LTR ERVL 19 521 0 251 346 0 12 chr20 2224539 2224620 -69929262 - L2 LINE L2 -211 3061 2982 356 175 32 0 chr20 2224647 2224710 -69929172 - MIR SINE MIR -67 141 77 1213 209 106 9 chr20 2224915 2225236 -69928646 + L1ME3 LINE L1 4497 4848 -1298 1720 158 17 31 chr20 2225355 2225647 -69928235 + AluJo SINE Alu 12 299 -13 478 247 67 3 chr20 2225648 2225843 -69928039 + L1ME3 LINE L1 5771 5979 -183 2940 147 33 0 chr20 2225847 2226338 -69927544 + L1MB2 LINE L1 5319 5825 -346 5189 53 0 3 chr20 2226340 2226979 -69926903 + L1PA8 LINE L1 5536 6172 0 1890 161 14 11 chr20 2226979 2227326 -69926556 + L1MB2 LINE L1 5821 6169 -2 823 176 12 18 chr20 2227368 2227533 -69926349 + L1ME3 LINE L1 5998 6161 -1 670 277 106 25 chr20 2227546 2227828 -69926054 - MLT1L LTR MaLR -153 462 158 2085 113 7 0 chr20 2227885 2228215 -69925667 - AluSx SINE Alu 0 332 1 2305 88 3 3 chr20 2228715 2229010 -69924872 - AluSc SINE Alu -14 295 1 332 259 75 58 chr20 2229015 2229189 -69924693 - MER5B DNA MER1_type -1 177 1 2126 99 8 74 chr20 2229414 2229767 -69924115 + MER1B DNA MER1_type 1 330 -9 621 241 128 5 chr20 2229768 2229955 -69923927 + MLT1L LTR MaLR 400 609 -6 1310 191 40 20 chr20 2229959 2230211 -69923671 - AluJo SINE Alu -54 258 2 23 54 0 0 chr20 2230270 2230307 -69923575 + AT_rich Low_complexity Low_complexity 1 37 0 2136 139 0 0 chr20 2230385 2230680 -69923202 + AluSx SINE Alu 1 295 -17 888 245 64 19 chr20 2231303 2231568 -69922314 - L1ME4a LINE L1 -296 5825 5549 1074 149 11 0 chr20 2232121 2232302 -69921580 + L1MB3 LINE L1 6001 6183 0 11684 176 46 56 chr20 2232316 2234552 -69919330 + L1MC1 LINE L1 19 2276 -4150 2254 165 41 10 chr20 2234552 2234965 -69918917 - MSTA LTR MaLR 0 428 3 11684 176 46 56 chr20 2234965 2235185 -69918697 + L1MC1 LINE L1 2276 2497 -3929 2316 97 3 3 chr20 2235185 2235485 -69918397 + AluSg SINE Alu 2 301 -9 11684 176 46 56 chr20 2235485 2235635 -69918247 + L1MC1 LINE L1 2497 2647 -3779 2215 118 0 3 chr20 2235635 2235932 -69917950 + AluSc SINE Alu 1 296 -13 11684 176 46 56 chr20 2235932 2236124 -69917758 + L1MC1 LINE L1 2647 2839 -3587 2011 155 7 0 chr20 2236124 2236434 -69917448 + AluJo SINE Alu 1 312 0 11684 176 46 56 chr20 2236434 2236705 -69917177 + L1MC1 LINE L1 2839 3111 -3315 2304 104 3 0 chr20 2236705 2237002 -69916880 + AluSp SINE Alu 1 298 -15 11684 176 46 56 chr20 2237002 2237276 -69916606 + L1MC1 LINE L1 3111 3386 -3040 2162 137 0 3 chr20 2237276 2237583 -69916299 + AluSx SINE Alu 1 306 -6 11684 176 46 56 chr20 2237583 2237786 -69916096 + L1MC1 LINE L1 3386 3590 -2836 2216 112 0 7 chr20 2237786 2238089 -69915793 + AluSg SINE Alu 1 301 -9 11684 176 46 56 chr20 2238089 2238430 -69915452 + L1MC1 LINE L1 3590 3853 -2573 1714 168 0 30 chr20 2238440 2238920 -69914962 + AluJo SINE Alu 7 477 0 1637 223 216 59 chr20 2238955 2239367 -69914515 + L1MC1 LINE L1 3843 4189 -2237 816 161 23 0 chr20 2239367 2239497 -69914385 + FLAM_A SINE Alu 1 133 0 1637 223 216 59 chr20 2239497 2240072 -69913810 + L1MC1 LINE L1 4189 4985 -1441 235 229 16 0 chr20 2240085 2240146 -69913736 + L1MC1 LINE L1 4961 5022 -1404 542 138 0 0 chr20 2240163 2240243 -69913639 + FRAM SINE Alu 35 114 -62 315 0 0 0 chr20 2240592 2240627 -69913255 + (CA)n Simple_repeat Simple_repeat 2 36 0 6442 171 16 28 chr20 2240630 2242235 -69911647 + L1MC1 LINE L1 5023 6613 0 561 30 0 0 chr20 2242275 2242342 -69911540 + (TA)n Simple_repeat Simple_repeat 1 67 0 1287 107 6 0 chr20 2242342 2242520 -69911362 - AluSq SINE Alu -1 312 134 2271 48 25 67 chr20 2242520 2242835 -69911047 - AluY SINE Alu -9 302 1 2296 111 0 0 chr20 2242974 2243280 -69910602 + AluSg SINE Alu 1 306 -4 342 307 24 8 chr20 2243596 2243723 -69910159 - LTR67 LTR ERVL -2 555 427 248 291 45 55 chr20 2243825 2243935 -69909947 + LTR16C LTR ERVL 87 195 -296 598 267 46 20 chr20 2243977 2244172 -69909710 + LTR16C LTR ERVL 284 483 -8 526 292 36 105 chr20 2244174 2244612 -69909270 - LTR67 LTR ERVL -126 431 24 336 368 23 18 chr20 2245129 2245300 -69908582 - L2 LINE L2 -214 3058 2887 589 292 103 80 chr20 2245554 2246263 -69907619 - HAL1 LINE L1 -1606 901 177 319 137 0 95 chr20 2246424 2246519 -69907363 + L1MB2 LINE L1 6082 6167 -4 819 201 0 0 chr20 2246706 2246850 -69907032 + MER5A DNA MER1_type 9 152 -37 462 303 31 6 chr20 2247021 2247183 -69906699 - MIR SINE MIR -5 257 92 2352 98 0 0 chr20 2247252 2247547 -69906335 - AluSc SINE Alu -14 295 1 211 296 31 31 chr20 2247619 2247717 -69906165 + L2 LINE L2 2979 3076 -196 4998 180 67 22 chr20 2247805 2247917 -69905965 + L1MD2 LINE L1 4921 5027 -1332 1734 173 3 26 chr20 2247917 2248224 -69905658 - AluJo SINE Alu -12 300 1 4998 180 67 22 chr20 2248224 2248666 -69905216 + L1MD2 LINE L1 5027 5448 -911 2350 99 0 0 chr20 2248666 2248959 -69904923 + AluSx SINE Alu 1 293 -19 4998 180 67 22 chr20 2248959 2249679 -69904203 + L1MD2 LINE L1 5448 6252 -107 401 113 32 0 chr20 2249718 2249780 -69904102 + L1MC/D LINE L1 5504 5567 -675 521 105 47 0 chr20 2249785 2249871 -69904011 + L1MD2 LINE L1 6266 6355 -4 1688 168 67 101 chr20 2249872 2250186 -69903696 - Charlie1b DNA MER1_type -2289 472 178 1334 184 21 0 chr20 2250186 2250420 -69903462 - MER8 DNA MER2_type 0 239 1 1688 168 67 101 chr20 2250420 2250581 -69903301 - Charlie1b DNA MER1_type -2583 178 13 210 178 22 0 chr20 2250640 2250685 -69903197 + L2 LINE L2 3188 3233 -39 213 132 0 0 chr20 2250687 2250725 -69903157 + (GA)n Simple_repeat Simple_repeat 2 39 0 727 313 144 18 chr20 2251543 2251882 -69902000 - MLT1J LTR MaLR -31 480 99 802 144 83 72 chr20 2252091 2252215 -69901667 - MER5A DNA MER1_type 0 189 61 2251 105 13 3 chr20 2252215 2252521 -69901361 - AluSc SINE Alu 0 309 1 802 144 83 72 chr20 2252521 2252577 -69901305 - MER5A DNA MER1_type -128 61 7 807 269 96 15 chr20 2252975 2253310 -69900572 + L1MC4a LINE L1 5455 5816 -1992 250 241 0 72 chr20 2253397 2253480 -69900402 + L1MC4a LINE L1 6057 6133 -1675 282 255 217 0 chr20 2253522 2253628 -69900254 - MIR SINE MIR -37 225 97 749 232 24 6 chr20 2253648 2253812 -69900070 + MER63A DNA MER1_type 39 205 -5 368 254 55 9 chr20 2254257 2254367 -69899515 + MIR SINE MIR 36 150 -112 2152 116 30 3 chr20 2254420 2254721 -69899161 + AluJb SINE Alu 1 309 -3 22 0 0 0 chr20 2255369 2255391 -69898491 + AT_rich Low_complexity Low_complexity 1 22 0 2470 78 0 13 chr20 2255712 2256021 -69897861 - AluSx SINE Alu -7 305 1 569 223 157 6 chr20 2256022 2256188 -69897694 + MIR SINE MIR 72 262 0 270 328 141 8 chr20 2256205 2256333 -69897549 + L2 LINE L2 3119 3263 -9 204 271 0 0 chr20 2256597 2256645 -69897237 + L2 LINE L2 3266 3313 0 603 272 59 25 chr20 2256895 2257134 -69896748 + MIR SINE MIR 15 261 -1 443 244 80 63 chr20 2257292 2257341 -69896541 - L1ME LINE L1 -352 5769 5722 189 0 0 0 chr20 2257341 2257362 -69896520 + (TA)n Simple_repeat Simple_repeat 2 22 0 443 244 80 63 chr20 2257362 2257550 -69896332 - L1ME LINE L1 -399 5722 5528 237 269 15 0 chr20 2257971 2258038 -69895844 - MER113 DNA MER1_type? 0 521 454 1051 200 130 82 chr20 2258139 2258639 -69895243 - HAL1 LINE L1 -4 2503 1980 787 211 5 52 chr20 2258708 2258902 -69894980 + MER5A DNA MER1_type 2 186 -3 324 357 23 29 chr20 2258908 2259018 -69894864 + MIR SINE MIR 12 122 -140 1909 153 7 0 chr20 2259018 2259312 -69894570 - AluSx SINE Alu -16 296 1 324 357 23 29 chr20 2259312 2259372 -69894510 + MIR SINE MIR 122 181 -81 211 133 0 0 chr20 2260043 2260073 -69893809 + L2 LINE L2 3222 3251 -21 585 273 134 34 chr20 2260081 2260374 -69893508 + L2 LINE L2 2782 3044 -269 2394 95 3 0 chr20 2260374 2260678 -69893204 - AluSp SINE Alu -8 305 1 585 273 134 34 chr20 2260678 2260879 -69893003 + L2 LINE L2 3044 3311 -2 1974 136 3 32 chr20 2261053 2261361 -69892521 + AluSx SINE Alu 1 299 -13 361 212 195 0 chr20 2261601 2261719 -69892163 + MIR SINE MIR 120 260 -2 1716 119 50 26 chr20 2261905 2262207 -69891675 + L1PA16 LINE L1 5849 6157 -9 1475 128 144 4 chr20 2262223 2262473 -69891409 + AluJb SINE Alu 1 285 -17 22 35 0 0 chr20 2262710 2262739 -69891143 + AT_rich Low_complexity Low_complexity 1 29 0 481 245 98 0 chr20 2262768 2262911 -69890971 - L1ME2 LINE L1 -114 6050 5894 1777 220 89 55 chr20 2262927 2263532 -69890350 - L1ME1 LINE L1 -5 6161 5536 291 346 55 0 chr20 2263546 2263673 -69890209 + L2 LINE L2 2912 3045 -268 737 112 16 48 chr20 2263673 2263798 -69890084 + MLT1B LTR MaLR 1 121 -269 4723 108 21 16 chr20 2263802 2264565 -69889317 + L1 LINE L1 3870 4636 -1510 1314 210 45 13 chr20 2264589 2264899 -69888983 + L1MC4 LINE L1 7165 7484 -558 1806 169 51 30 chr20 2264944 2265377 -69888505 + L1MC4 LINE L1 7470 7911 -131 246 105 18 73 chr20 2265378 2265443 -69888439 - L1M1 LINE L1 -603 5702 5641 231 250 70 23 chr20 2265477 2265605 -69888277 + L1MC4 LINE L1 7903 8036 -6 230 241 17 0 chr20 2265796 2265854 -69888028 - MIR SINE MIR -122 140 82 369 300 50 8 chr20 2265860 2265980 -69887902 + L2 LINE L2 3179 3303 -10 253 278 2 64 chr20 2266148 2266279 -69887603 - MIR SINE MIR -52 156 33 23 0 0 0 chr20 2267661 2267684 -69886198 + GC_rich Low_complexity Low_complexity 1 23 0 1828 156 0 13 chr20 2269565 2269867 -69884015 + AluJb SINE Alu 1 298 -14 248 305 130 19 chr20 2270182 2270336 -69883546 + MIR SINE MIR 2 172 -90 272 254 0 0 chr20 2270931 2270990 -69882892 - MIR3 SINE MIR -17 191 133 235 382 76 8 chr20 2271544 2271675 -69882207 - MIR3 SINE MIR -29 179 40 520 296 25 6 chr20 2272669 2272831 -69881051 - MIR SINE MIR -96 166 2 2224 97 7 3 chr20 2272921 2273220 -69880662 + AluSx SINE Alu 1 300 -12 281 349 72 12 chr20 2274150 2274316 -69879566 - MIR SINE MIR -70 192 17 294 306 82 14 chr20 2274404 2274551 -69879331 - MIR SINE MIR -36 226 70 230 222 37 0 chr20 2275621 2275675 -69878207 + MIR SINE MIR 92 147 -115 248 267 151 20 chr20 2275930 2276076 -69877806 + MER104 DNA Tc2 4 168 -12 1640 161 20 26 chr20 2276107 2276412 -69877470 + AluJo SINE Alu 1 303 -9 187 256 36 88 chr20 2277218 2277355 -69876527 + MIR3 SINE MIR 14 143 -65 1419 218 45 16 chr20 2277609 2277917 -69875965 - ERVL LTR ERVL -3552 2212 1896 24 32 0 0 chr20 2278026 2278057 -69875825 + AT_rich Low_complexity Low_complexity 1 31 0 199 239 0 0 chr20 2278562 2278608 -69875274 - MIR SINE MIR -78 130 85 211 365 0 14 chr20 2278662 2278736 -69875146 - MIR SINE MIR -120 88 16 685 181 0 0 chr20 2279029 2279145 -69874737 + FRAM SINE Alu 38 153 -23 2081 129 0 29 chr20 2282130 2282439 -69871443 - AluSx SINE Alu -12 300 1 198 229 0 21 chr20 2282610 2282658 -69871224 - L2 LINE L2 -212 3060 3014 386 250 122 11 chr20 2282832 2283020 -69870862 - L1ME4a LINE L1 -237 5884 5676 2111 56 0 8 chr20 2283039 2283290 -69870592 + AluY SINE Alu 47 295 -16 1561 117 20 137 chr20 2283318 2283712 -69870170 + MER7A DNA MER2_type 1 346 0 186 379 11 11 chr20 2283714 2283801 -69870081 - L2 LINE L2 -50 3222 3136 1662 239 195 31 chr20 2285365 2286626 -69867256 - L2 LINE L2 0 3313 1791 462 216 60 0 chr20 2286626 2286742 -69867140 - Charlie1 DNA MER1_type 0 2761 2639 1939 138 7 7 chr20 2286744 2287041 -69866841 + AluSx SINE Alu 1 297 -15 373 298 21 7 chr20 2287242 2287383 -69866499 + MIR SINE MIR 50 192 -70 310 260 104 0 chr20 2288693 2288789 -69865093 - MIR SINE MIR -155 107 2 659 193 139 6 chr20 2292739 2292905 -69860977 + MER5A DNA MER1_type 1 188 -1 2081 96 59 0 chr20 2293546 2293817 -69860065 - AluSc SINE Alu -22 287 1 196 211 0 0 chr20 2293874 2293912 -69859970 - L2 LINE L2 -9 3263 3226 189 394 56 0 chr20 2293964 2294106 -69859776 + MIR SINE MIR 107 256 -6 304 161 32 0 chr20 2294432 2294494 -69859388 - L2 LINE L2 -252 3061 2998 357 293 160 26 chr20 2294567 2294874 -69859008 - L2 LINE L2 -625 2689 2342 2391 99 108 214 chr20 2295737 2296026 -69857856 - Tigger3(Golem) DNA MER2_type -3 3026 2708 812 153 0 8 chr20 2296026 2296150 -69857732 + FLAM_C SINE Alu 1 123 -20 2391 99 108 214 chr20 2296150 2296430 -69857452 - Tigger3(Golem) DNA MER2_type -321 2708 2433 588 211 75 14 chr20 2296430 2296577 -69857305 - FAM SINE Alu -19 156 1 2391 99 108 214 chr20 2296577 2296709 -69857173 - Tigger3(Golem) DNA MER2_type -596 2433 2289 211 353 0 12 chr20 2296785 2296870 -69857012 - MIR SINE MIR -91 117 34 367 270 70 0 chr20 2297469 2297569 -69856313 + MIR SINE MIR 30 136 -72 1327 92 0 0 chr20 2298808 2298972 -69854910 + AluSg/x SINE Alu 137 300 -12 235 241 69 35 chr20 2299035 2299122 -69854760 - L3 LINE CR1 -189 1388 1299 2506 79 0 0 chr20 2299303 2299606 -69854276 + AluSx SINE Alu 1 303 -9 1887 108 58 0 chr20 2300275 2300535 -69853347 + AluSx SINE Alu 1 275 -37 918 182 45 0 chr20 2300544 2300698 -69853184 + AluJb SINE Alu 132 292 -20 267 298 91 8 chr20 2301087 2301208 -69852674 + MIR SINE MIR 5 135 -127 184 267 67 0 chr20 2301937 2301997 -69851885 - MIR SINE MIR -58 150 87 268 79 0 0 chr20 2302685 2302723 -69851159 + MIR SINE MIR 113 150 -112 342 325 145 5 chr20 2303062 2303262 -69850620 - MIR SINE MIR -15 247 20 1836 146 7 42 chr20 2303429 2303738 -69850144 + AluJo SINE Alu 1 298 -14 584 280 87 34 chr20 2304208 2304415 -69849467 + MIR SINE MIR 17 234 -28 218 274 73 81 chr20 2304683 2304807 -69849075 + MIR SINE MIR 21 141 -67 274 309 178 34 chr20 2306360 2306771 -69847111 - L1ME4a LINE L1 -123 5998 5529 1693 143 0 4 chr20 2307212 2307457 -69846425 + AluJo SINE Alu 45 288 -24 300 271 305 20 chr20 2307681 2307884 -69845998 - MIR SINE MIR 0 262 2 186 250 117 0 chr20 2307983 2308043 -69845839 + MIR SINE MIR 113 179 -83 432 225 101 14 chr20 2308205 2308343 -69845539 + MIR SINE MIR 33 182 -80 240 224 0 0 chr20 2308614 2308681 -69845201 + T-rich Low_complexity Low_complexity 1 67 0 202 322 33 41 chr20 2313406 2313527 -69840355 - MIR SINE MIR -116 146 27 228 281 233 14 chr20 2314038 2314184 -69839698 + MIR SINE MIR 67 244 -18 488 182 71 0 chr20 2314607 2314706 -69839176 - L1MB7 LINE L1 -43 6141 6036 411 167 0 0 chr20 2414708 2414774 -69739108 + AluSp/q SINE Alu 234 299 -14 204 274 43 60 chr20 2415243 2415360 -69738522 + MIR SINE MIR 148 262 0 189 213 0 0 chr20 2416186 2416233 -69737649 + (TATATG)n Simple_repeat Simple_repeat 4 50 0 506 330 132 26 chr20 2416263 2416611 -69737271 - L2 LINE L2 -81 3232 2848 211 336 44 9 chr20 2416660 2416773 -69737109 - MIR3 SINE MIR -54 154 38 2145 123 13 25 chr20 2417144 2417460 -69736422 - AluSx SINE Alu 0 312 1 448 222 21 56 chr20 2417499 2417643 -69736239 + L1MC/D LINE L1 5658 5796 -2012 898 260 22 5 chr20 2417643 2417866 -69736016 + MIR SINE MIR 36 262 0 1549 117 0 14 chr20 2418195 2418409 -69735473 - AluSg/x SINE Alu -17 293 83 827 149 0 0 chr20 2418409 2418523 -69735359 - AluSp SINE Alu -63 250 137 276 276 81 8 chr20 2419363 2419486 -69734396 - MIR3 SINE MIR -26 182 51 392 277 69 75 chr20 2420150 2420338 -69733544 - MIR SINE MIR -4 258 72 1002 221 41 156 chr20 2420648 2421277 -69732605 + MLT1G LTR MaLR 34 590 0 189 214 36 0 chr20 2421701 2421757 -69732125 + L2 LINE L2 2716 2773 -541 661 251 25 6 chr20 2421767 2421930 -69731952 + Charlie8 DNA MER1_type 11 176 -2241 902 165 74 0 chr20 2422357 2422533 -69731349 + MER5A DNA MER1_type 1 189 0 2464 93 3 0 chr20 2423207 2423517 -69730365 - AluSp SINE Alu -2 311 1 477 254 164 0 chr20 2423590 2423755 -69730127 - MIR SINE MIR -57 205 14 1910 146 0 14 chr20 2425096 2425408 -69728474 - AluSx SINE Alu 0 308 1 2485 226 30 41 chr20 2425413 2425593 -69728289 + MER82 DNA MER2_type 23 203 -450 1866 112 35 18 chr20 2425593 2425878 -69728004 + AluSx SINE Alu 5 294 -18 2485 226 30 41 chr20 2425878 2426335 -69727547 + MER82 DNA MER2_type 203 653 0 420 323 125 0 chr20 2426412 2426506 -69727376 + MIR SINE MIR 1 82 -180 1719 165 39 4 chr20 2426506 2426785 -69727097 - AluJb SINE Alu -23 289 1 420 323 125 0 chr20 2426785 2426922 -69726960 + MIR SINE MIR 82 261 -1 297 339 0 35 chr20 2427181 2427296 -69726586 - L2 LINE L2 -37 3276 3166 289 379 16 0 chr20 2427600 2427724 -69726158 - L2 LINE L2 -527 2787 2662 1385 258 79 22 chr20 2428266 2428898 -69724984 + L2 LINE L2 2642 3313 0 314 239 110 9 chr20 2428904 2429013 -69724869 - MIR SINE MIR -130 132 13 250 272 58 10 chr20 2429086 2429186 -69724696 + MER112 DNA MER1_type 56 160 -100 1867 235 17 34 chr20 2429186 2429662 -69724220 - MER90 LTR ERV1 0 614 147 517 241 82 10 chr20 2429653 2429860 -69724022 + MER20B DNA MER1_type 524 745 -38 * 1763 249 72 77 chr20 2429894 2430492 -69723390 - MLT1F LTR MaLR 0 542 1 572 262 30 69 chr20 2430630 2430792 -69723090 - MIR SINE MIR -13 249 95 765 164 0 15 chr20 2430792 2430926 -69722956 - FLAM_C SINE Alu -1 132 1 572 262 30 69 chr20 2430926 2430965 -69722917 - MIR SINE MIR -167 95 56 2072 224 111 9 chr20 2431188 2431728 -69722154 + MLT1G1 LTR MaLR 1 595 0 203 206 87 127 chr20 2432238 2432364 -69721518 - MIR3 SINE MIR -4 204 84 297 323 164 35 chr20 2432723 2432949 -69720933 - L3 LINE CR1 -29 1548 1294 535 319 32 0 chr20 2433454 2433611 -69720271 + L2 LINE L2 3111 3272 0 182 118 59 0 chr20 2433896 2433930 -69719952 + MIR SINE MIR 109 144 -64 185 315 39 55 chr20 2434249 2434376 -69719506 - L3 LINE CR1 -32 1545 1421 576 321 80 13 chr20 2434693 2434930 -69718952 + MIR SINE MIR 9 261 -1 283 293 154 8 chr20 2434988 2435111 -69718771 + MIR SINE MIR 58 198 -64 310 296 10 0 chr20 2435119 2435217 -69718665 + MER94 DNA DNA 1 99 -35 2507 76 0 0 chr20 2435288 2435590 -69718292 - AluY SINE Alu -9 302 1 229 239 104 15 chr20 2435763 2435830 -69718052 - MIR3 SINE MIR -49 159 87 464 274 68 7 chr20 2436490 2436636 -69717246 + MER117 DNA MER1_type 6 160 -37 180 270 243 0 chr20 2436834 2436908 -69716974 - MIR3 SINE MIR -54 154 63 1931 158 0 3 chr20 2437484 2437781 -69716101 - AluJb SINE Alu -16 296 1 400 274 9 0 chr20 2437850 2437963 -69715919 - MIR SINE MIR -70 192 79 364 333 18 0 chr20 2439181 2439295 -69714587 + MIR3 SINE MIR 86 201 -7 2161 112 10 10 chr20 2439974 2440268 -69713614 - AluSx SINE Alu -18 294 1 554 202 118 22 chr20 2440276 2440454 -69713428 + MIR3 SINE MIR 12 206 -2 483 350 101 28 chr20 2440655 2440766 -69713116 - L1ME4a LINE L1 -160 5961 5859 2008 103 11 29 chr20 2440766 2441047 -69712835 - AluY SINE Alu -13 298 23 483 350 101 28 chr20 2441047 2441252 -69712630 - L1ME4a LINE L1 -262 5859 5622 557 268 87 42 chr20 2441270 2441535 -69712347 + L1MC4a LINE L1 5621 5897 -1911 26 0 0 0 chr20 2441628 2441654 -69712228 + AT_rich Low_complexity Low_complexity 1 26 0 716 155 39 16 chr20 2441657 2441786 -69712096 + FLAM_A SINE Alu 1 132 -1 208 230 58 58 chr20 2441859 2441946 -69711936 + L2 LINE L2 2720 2806 -508 2183 104 0 0 chr20 2441956 2442254 -69711628 - AluSq SINE Alu -15 298 1 1036 207 78 0 chr20 2442548 2442765 -69711117 + MIR SINE MIR 29 262 0 335 256 61 0 chr20 2442765 2442847 -69711035 + L1ME4a LINE L1 6035 6121 0 1830 107 52 21 chr20 2443327 2443616 -69710266 - AluSx SINE Alu -14 298 1 30 27 0 0 chr20 2443618 2443655 -69710227 + AT_rich Low_complexity Low_complexity 1 37 0 1768 156 17 61 chr20 2443785 2444195 -69709687 + Charlie1b DNA MER1_type 132 523 0 206 221 11 5 chr20 2444589 2444656 -69709226 + MIR SINE MIR 100 166 -65 1239 179 0 41 chr20 2445552 2445798 -69708084 - AluJo SINE Alu -76 236 1 826 195 40 40 chr20 2445981 2446181 -69707701 + L1ME2 LINE L1 5946 6145 -19 316 248 35 106 chr20 2446233 2446459 -69707423 + L1MC4 LINE L1 7832 8041 -1 849 152 0 8 chr20 2446528 2446660 -69707222 - FLAM_A SINE Alu -2 131 1 318 355 6 6 chr20 2446671 2446837 -69707045 + LTR67 LTR ERVL 36 201 -356 503 312 5 24 chr20 2447701 2447919 -69705963 - MIR SINE MIR -8 254 7 4412 235 56 119 chr20 2448770 2449436 -69704446 + HAL1 LINE L1 120 827 -1680 1541 183 20 7 chr20 2449436 2449742 -69704140 - AluJo SINE Alu -2 310 1 4412 235 56 119 chr20 2449742 2451488 -69702394 + HAL1 LINE L1 827 2379 -128 276 174 0 0 chr20 2451503 2451549 -69702333 - MLT1E3 LTR MaLR -19 605 560 2306 192 50 52 chr20 2451562 2452145 -69701737 + L1MB5 LINE L1 5586 6167 -7 2056 100 28 3 chr20 2452328 2452617 -69701265 - AluSq SINE Alu -17 296 1 1222 230 108 49 chr20 2452829 2453334 -69700548 - MLT1E3 LTR MaLR -51 573 29 1574 211 133 42 chr20 2453334 2453375 -69700507 - MLT2B1 LTR ERVL 0 520 484 234 0 0 0 chr20 2453375 2453401 -69700481 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 1574 211 133 42 chr20 2453401 2453834 -69700048 - MLT2B1 LTR ERVL -36 484 3 1222 230 108 49 chr20 2453834 2453862 -69700020 - MLT1E3 LTR MaLR -595 29 4 734 330 48 22 chr20 2453991 2454264 -69699618 + MER115 DNA AcHobo 90 369 -324 2477 176 28 35 chr20 2454264 2454579 -69699303 - L1MD2 LINE L1 0 6359 6048 2312 84 0 0 chr20 2454579 2454878 -69699004 - AluY SINE Alu -12 299 1 2477 176 28 35 chr20 2454878 2455107 -69698775 - L1MD2 LINE L1 -311 6048 5819 1719 214 43 0 chr20 2455107 2455481 -69698401 + L1MD1 LINE L1 5494 5883 -359 207 0 0 0 chr20 2455499 2455522 -69698360 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1161 227 52 0 chr20 2455559 2455810 -69698072 - L1MDb LINE L1 -6138 271 8 652 279 61 39 chr20 2455842 2456122 -69697760 + MER115 DNA AcHobo 407 692 -1 1629 167 13 23 chr20 2456237 2456537 -69697345 + AluJo SINE Alu 1 297 -15 10189 157 71 8 chr20 2456732 2458721 -69695161 + L1M4c LINE L1 2 2211 -4173 1466 177 0 4 chr20 2458723 2458994 -69694888 + L1MB3 LINE L1 5912 6181 -2 524 144 29 93 chr20 2459026 2459102 -69694780 + L1ME3 LINE L1 6030 6095 -67 6473 98 7 2 chr20 2459102 2460719 -69693163 + L1PA15 LINE L1 4528 6165 0 524 144 29 93 chr20 2460719 2460781 -69693101 + L1ME3 LINE L1 6095 6159 -3 512 310 179 14 chr20 2461525 2461877 -69692005 + L2 LINE L2 2140 2549 -765 816 286 97 19 chr20 2462052 2462423 -69691459 - LTR16C LTR ERVL 0 491 92 838 275 36 18 chr20 2462833 2463219 -69690663 - L1M4c LINE L1 -3989 2657 2265 1509 134 14 28 chr20 2463251 2463534 -69690348 - L1MB3 LINE L1 -1 6182 5904 2927 180 82 15 chr20 2463538 2464326 -69689556 - L1MB3 LINE L1 -590 5593 4724 2723 252 98 29 chr20 2464316 2466208 -69687674 - L1M4c LINE L1 -4495 2151 48 * 458 225 1 25 chr20 2466261 2466395 -69687487 - L1MC5 LINE L1 0 8042 7808 2100 106 3 26 chr20 2466514 2466825 -69687057 - AluSx SINE Alu -4 308 5 192 195 0 24 chr20 2467146 2467187 -69686695 - MER5A DNA MER1_type -114 75 36 944 0 0 9 chr20 2467214 2467327 -69686555 - AluY SINE Alu -2 309 198 1043 218 36 18 chr20 2467764 2467984 -69685898 - MIR SINE MIR 0 262 39 244 239 14 42 chr20 2468212 2468283 -69685599 - MER5A DNA MER1_type -84 105 37 * 298 284 0 14 chr20 2468228 2468302 -69685580 + MER5A DNA MER1_type 111 183 -6 278 275 34 98 chr20 2468415 2468651 -69685231 - MLT1J LTR MaLR -24 487 267 362 336 39 0 chr20 2468658 2468786 -69685096 + LTR67 LTR ERVL 110 242 -315 227 289 11 116 chr20 2468849 2469039 -69684843 + LTR67 LTR ERVL 362 531 -26 408 278 156 23 chr20 2469155 2469328 -69684554 + L2 LINE L2 3118 3313 0 1301 270 137 35 chr20 2469749 2470092 -69683790 - MLT1G1 LTR MaLR 0 595 176 531 0 0 0 chr20 2470092 2470151 -69683731 + (GA)n Simple_repeat Simple_repeat 1 59 0 1301 270 137 35 chr20 2470151 2470347 -69683535 - MLT1G1 LTR MaLR -419 176 1 1090 254 194 12 chr20 2470871 2471506 -69682376 + L2 LINE L2 2432 3189 -124 1207 95 0 0 chr20 2471809 2471977 -69681905 + AluY SINE Alu 131 298 -13 234 247 86 12 chr20 2472738 2472819 -69681063 + MIR SINE MIR 111 197 -65 846 229 106 4 chr20 2473188 2473424 -69680458 + MIR SINE MIR 1 260 -2 274 330 26 110 chr20 2473498 2473771 -69680111 - L2 LINE L2 -25 3247 2998 291 247 215 0 chr20 2473821 2473914 -69679968 - MLT1H LTR MaLR -16 533 421 1702 225 85 44 chr20 2473921 2474044 -69679838 - L1MEc LINE L1 -2649 3566 3450 1693 163 48 0 chr20 2474044 2474338 -69679544 - AluJb SINE Alu -4 308 1 1702 225 85 44 chr20 2474338 2474610 -69679272 - L1MEc LINE L1 -2765 3450 3191 2117 111 3 0 chr20 2474610 2474917 -69678965 - AluSp SINE Alu -5 308 1 1702 225 85 44 chr20 2474917 2475250 -69678632 - L1MEc LINE L1 -3024 3191 2807 * 1737 231 66 11 chr20 2475243 2475667 -69678215 - L1MEc LINE L1 -3873 2523 2124 2021 143 0 0 chr20 2475667 2475974 -69677908 - AluSx SINE Alu -5 307 1 1881 166 3 6 chr20 2475977 2476290 -69677592 - AluSx SINE Alu 0 312 1 1737 231 66 11 chr20 2476290 2476485 -69677397 - L1MEc LINE L1 -4273 2123 1866 2471 282 35 27 chr20 2476485 2477254 -69676628 - HERV16 LTR ERVL -3667 1329 555 648 165 0 19 chr20 2477339 2477442 -69676440 - FRAM SINE Alu -16 160 60 414 212 278 10 chr20 2478068 2478266 -69675616 - L3 LINE CR1 -115 1462 1212 817 165 0 0 chr20 2479934 2480061 -69673821 - FLAM_C SINE Alu -16 127 1 192 351 36 0 chr20 2480214 2480325 -69673557 - L3 LINE CR1 -379 1198 1084 259 223 146 29 chr20 2480472 2480575 -69673307 + MIR3 SINE MIR 67 181 -27 212 269 51 13 chr20 2480735 2480813 -69673069 - MIR SINE MIR -119 143 63 2175 85 7 3 chr20 2481684 2481979 -69671903 - AluSx SINE Alu -16 296 1 432 288 85 42 chr20 2482290 2482526 -69671356 - L2 LINE L2 -44 3269 3024 276 338 58 19 chr20 2482523 2482677 -69671205 - MIR SINE MIR -90 172 13 * 245 323 219 0 chr20 2483450 2483605 -69670277 + MIR3 SINE MIR 20 208 0 917 106 8 0 chr20 2484621 2484753 -69669129 - FLAM_C SINE Alu -10 133 1 227 309 111 25 chr20 2485492 2485654 -69668228 - MIR3 SINE MIR -29 179 4 1693 130 41 54 chr20 2485720 2486036 -69667846 + AluJo SINE Alu 1 312 0 311 270 53 112 chr20 2486616 2486768 -69667114 + MIR SINE MIR 1 143 -65 2169 110 0 22 chr20 2488373 2488692 -69665190 - AluSx SINE Alu 0 312 1 553 315 104 14 chr20 2489560 2489782 -69664100 - MIR SINE MIR -13 249 8 252 318 11 11 chr20 2489842 2489930 -69663952 + L2 LINE L2 3184 3271 -1 428 315 103 5 chr20 2490312 2490496 -69663386 + MARNA DNA Mariner 301 502 -84 189 0 0 0 chr20 2491771 2491792 -69662090 + (TAGA)n Simple_repeat Simple_repeat 1 21 0 569 181 66 163 chr20 2491794 2491916 -69661966 + MER112 DNA MER1_type 1 133 -127 184 42 0 0 chr20 2491916 2491940 -69661942 + (TTTG)n Simple_repeat Simple_repeat 1 180 0 2154 59 0 24 chr20 2491940 2492227 -69661655 - AluY SINE Alu -1 303 1 569 181 66 163 chr20 2492227 2492391 -69661491 + MER112 DNA MER1_type 131 260 0 1789 143 7 7 chr20 2492556 2492849 -69661033 - AluSx SINE Alu -19 293 1 207 180 45 112 chr20 2493537 2493626 -69660256 - MIR SINE MIR -57 151 69 505 317 112 18 chr20 2493661 2493885 -69659997 - MIR SINE MIR -9 253 9 1990 261 133 25 chr20 2494456 2495367 -69658515 + L1ME LINE L1 6 1014 -5056 1764 240 71 62 chr20 2495485 2496346 -69657536 + L1PB1 LINE L1 5282 6150 -1 740 206 24 12 chr20 2496650 2496815 -69657067 - MIR SINE MIR -57 205 39 386 169 8 89 chr20 2496883 2497007 -69656875 + L1ME4a LINE L1 5786 5899 -222 25 0 0 0 chr20 2497212 2497237 -69656645 + AT_rich Low_complexity Low_complexity 1 25 0 235 265 29 44 chr20 2497948 2498016 -69655866 + L2 LINE L2 2988 3054 -218 211 383 25 0 chr20 2498856 2498937 -69654945 - MIR3 SINE MIR -42 166 84 550 190 141 68 chr20 2498963 2499126 -69654756 + MIR SINE MIR 82 256 -6 549 257 56 50 chr20 2499436 2499615 -69654267 - MIR3 SINE MIR -7 201 22 182 250 0 0 chr20 2499876 2499908 -69653974 + MIR SINE MIR 38 69 -139 2102 111 3 0 chr20 2501097 2501386 -69652496 + AluSq SINE Alu 1 290 -23 293 0 0 26 chr20 2501455 2501493 -69652389 + (TA)n Simple_repeat Simple_repeat 2 38 0 206 0 42 83 chr20 2502790 2502838 -69651044 + (TTTA)n Simple_repeat Simple_repeat 3 48 0 1674 130 67 0 chr20 2502848 2503118 -69650764 - AluSx SINE Alu -24 288 1 195 232 0 0 chr20 2503185 2503241 -69650641 + (TTCA)n Simple_repeat Simple_repeat 1 56 0 549 246 67 58 chr20 2503322 2503546 -69650336 + L1MC5 LINE L1 7706 7931 -30 267 209 42 49 chr20 2503550 2503656 -69650226 + MIR SINE MIR 42 146 -73 207 294 44 0 chr20 2503732 2503800 -69650082 + MIR3 SINE MIR 112 182 -26 1357 192 66 0 chr20 2504685 2504844 -69649038 - AluJo SINE Alu -20 292 106 402 21 0 0 chr20 2504844 2504891 -69648991 + (TG)n Simple_repeat Simple_repeat 2 48 0 1357 192 66 0 chr20 2504891 2505002 -69648880 - AluJo SINE Alu -206 106 4 1553 168 0 59 chr20 2505074 2505229 -69648653 - AluJo SINE Alu -24 288 158 1561 172 35 14 chr20 2505229 2505519 -69648363 - AluJb SINE Alu -13 299 4 1553 168 0 59 chr20 2505519 2505667 -69648215 - AluJo SINE Alu -154 158 3 234 171 0 0 chr20 2505733 2505803 -69648079 + (TG)n Simple_repeat Simple_repeat 2 71 0 277 265 128 0 chr20 2505827 2505929 -69647953 + MIR3 SINE MIR 43 157 -51 427 323 71 9 chr20 2506130 2506356 -69647526 + MIR SINE MIR 14 253 -9 32 0 0 0 chr20 2506781 2506813 -69647069 + AT_rich Low_complexity Low_complexity 1 32 0 272 259 106 12 chr20 2506899 2506984 -69646898 + MIR3 SINE MIR 94 186 -22 2243 102 10 0 chr20 2506994 2507298 -69646584 - AluSx SINE Alu -5 307 1 601 252 48 48 chr20 2507418 2507648 -69646234 + L2 LINE L2 2896 3125 -188 419 333 71 7 chr20 2508028 2508169 -69645713 + L2 LINE L2 3122 3271 -1 259 292 37 14 chr20 2508723 2508856 -69645026 - MIR SINE MIR -62 200 64 368 314 39 13 chr20 2509357 2509513 -69644369 - MIR3 SINE MIR -27 181 22 242 383 33 0 chr20 2509999 2510119 -69643763 + L2 LINE L2 2904 3027 -245 2057 120 0 3 chr20 2510238 2510539 -69643343 + AluSq SINE Alu 2 301 -12 1789 158 0 3 chr20 2511173 2511476 -69642406 - AluJb SINE Alu -10 302 1 213 245 0 0 chr20 2511528 2511577 -69642305 + (TAAA)n Simple_repeat Simple_repeat 4 52 0 186 143 0 0 chr20 2512234 2512269 -69641613 + (TTCA)n Simple_repeat Simple_repeat 3 37 0 2119 134 0 6 chr20 2512639 2512953 -69640929 + AluSx SINE Alu 1 312 0 416 346 86 7 chr20 2513494 2513709 -69640173 - MIR SINE MIR -14 248 18 395 223 21 11 chr20 2513891 2513985 -69639897 - MIR SINE MIR -121 141 47 2997 201 95 43 chr20 2513985 2514751 -69639131 + MER21B LTR ERV1 1 806 -57 219 209 99 55 chr20 2515437 2515528 -69638354 - MIR3 SINE MIR -25 183 89 239 277 53 11 chr20 2515735 2515829 -69638053 + MLT1J LTR MaLR 104 201 -310 2378 148 30 70 chr20 2515843 2516086 -69637796 - L1MB5 LINE L1 -6 6168 5917 2199 96 3 6 chr20 2516086 2516398 -69637484 - AluSx SINE Alu -1 311 1 2378 148 30 70 chr20 2516398 2516693 -69637189 - L1MB5 LINE L1 -257 5917 5652 663 231 60 82 chr20 2516739 2517021 -69636861 + MLT1J LTR MaLR 224 499 -12 2159 102 0 0 chr20 2517415 2517708 -69636174 + AluSx SINE Alu 1 293 -19 660 251 96 17 chr20 2517728 2517967 -69635915 + MER112 DNA MER1_type 2 259 -1 193 244 67 84 chr20 2517967 2518086 -69635796 - MIR3 SINE MIR -48 160 44 267 312 0 64 chr20 2518392 2518501 -69635381 + MIR SINE MIR 87 188 -74 564 301 46 20 chr20 2518624 2518820 -69635062 - MIR SINE MIR -16 246 46 329 295 80 18 chr20 2519014 2519126 -69634756 + MER5B DNA MER1_type 1 119 -59 602 136 0 30 chr20 2519126 2519258 -69634624 + (TTTC)n Simple_repeat Simple_repeat 1 128 0 1815 156 6 34 chr20 2519280 2519600 -69634282 - AluSx SINE Alu -1 311 1 280 183 0 50 chr20 2519600 2519660 -69634222 + MER5B DNA MER1_type 121 177 -1 227 180 0 40 chr20 2519766 2519816 -69634066 - MIR SINE MIR -62 146 99 576 276 43 0 chr20 2520211 2520374 -69633508 - MIR SINE MIR -92 170 1 182 295 95 32 chr20 2521541 2521636 -69632246 + L2 LINE L2 3153 3253 -19 269 318 159 8 chr20 2521974 2522100 -69631782 - MIR3 SINE MIR -17 191 47 260 278 146 28 chr20 2522164 2522308 -69631574 + MIR3 SINE MIR 23 183 -25 277 367 93 0 chr20 2524663 2524802 -69629080 + L2 LINE L2 3121 3272 0 644 216 207 19 chr20 2524851 2525059 -69628823 - MIR SINE MIR 0 262 16 263 307 193 9 chr20 2525564 2525678 -69628204 + MIR SINE MIR 96 230 -32 22 0 0 0 chr20 2525697 2525719 -69628163 + AT_rich Low_complexity Low_complexity 1 22 0 2056 106 20 3 chr20 2525723 2526016 -69627866 + AluSx SINE Alu 1 298 -14 456 337 87 0 chr20 2526143 2526315 -69627567 + MIR3 SINE MIR 2 143 -65 2165 104 0 3 chr20 2526844 2527141 -69626741 - AluSq SINE Alu -15 298 3 261 242 17 92 chr20 2527193 2527313 -69626569 + L2 LINE L2 3151 3261 -52 788 172 16 0 chr20 2527340 2527468 -69626414 + FLAM_C SINE Alu 2 131 -12 424 267 44 84 chr20 2527515 2527811 -69626071 - L3 LINE CR1 -193 1384 1101 2206 95 0 0 chr20 2527924 2528220 -69625662 - AluSx SINE Alu -16 296 1 475 232 30 77 chr20 2528462 2528630 -69625252 + MIR SINE MIR 47 206 -56 512 301 107 5 chr20 2528805 2529011 -69624871 - MIR SINE MIR -35 227 1 2173 112 0 0 chr20 2529869 2530174 -69623708 + AluSx SINE Alu 1 305 -7 370 290 28 0 chr20 2530208 2530315 -69623567 - MIR3 SINE MIR -14 194 85 322 286 0 51 chr20 2530310 2530408 -69623474 - MIR3 SINE MIR -3 205 113 * 1751 164 0 4 chr20 2530513 2530794 -69623088 - AluJb SINE Alu -28 284 5 1041 296 25 68 chr20 2532610 2533093 -69620789 - L2 LINE L2 -1 3312 2851 1681 120 0 0 chr20 2533195 2533436 -69620446 + AluSc SINE Alu 63 303 -6 1479 200 62 0 chr20 2533486 2533806 -69620076 - MER58B DNA MER1_type 0 341 2 1509 172 41 7 chr20 2533816 2534145 -69619737 - MER33 DNA MER1_type 0 324 1 243 295 0 0 chr20 2534251 2534329 -69619553 + (ATTTG)n Simple_repeat Simple_repeat 5 82 0 1253 108 0 0 chr20 2534581 2534757 -69619125 + AluSq SINE Alu 135 310 -3 222 62 0 0 chr20 2534771 2534803 -69619079 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 803 160 15 0 chr20 2535195 2535413 -69618469 - FLAM_C SINE Alu 0 220 1 725 313 84 10 chr20 2535546 2535856 -69618026 - MLT1I LTR MaLR -14 395 63 463 280 114 89 chr20 2535988 2536235 -69617647 - L1MC5 LINE L1 -105 7856 7600 1761 146 3 7 chr20 2536235 2536522 -69617360 - AluJb SINE Alu -26 286 1 463 280 114 89 chr20 2536522 2536545 -69617337 - L1MC5 LINE L1 -361 7600 7579 2820 250 120 37 chr20 2536784 2538203 -69615679 + L1MC4a LINE L1 4762 6062 -84 1012 201 106 0 chr20 2538203 2538402 -69615480 + MER58A DNA MER1_type 4 223 -1 2820 250 120 37 chr20 2538402 2538503 -69615379 + L1MC4a LINE L1 6062 5345 -801 2032 108 35 0 chr20 2538503 2538791 -69615091 - AluSp SINE Alu -15 298 1 2820 250 120 37 chr20 2538791 2538857 -69615025 + L1MC4a LINE L1 5344 5403 -743 234 330 11 11 chr20 2540023 2540111 -69613771 + L2 LINE L2 3173 3260 -12 403 217 198 76 chr20 2542602 2542921 -69610961 + LTR16A LTR ERVL 8 364 -93 186 254 0 0 chr20 2543822 2543889 -69609993 + CT-rich Low_complexity Low_complexity 2 68 0 1855 210 28 13 chr20 2544582 2544972 -69608910 - MSTD LTR MaLR 0 396 1 792 134 0 52 chr20 2545948 2546082 -69607800 + FLAM_C SINE Alu 2 128 -5 2123 108 0 0 chr20 2546447 2546716 -69607166 + AluSx SINE Alu 27 295 -17 783 185 7 22 chr20 2547503 2547638 -69606244 - FLAM_C SINE Alu 0 133 1 837 170 79 0 chr20 2548269 2548434 -69605448 + LTR41 LTR ERVL 1 178 -595 680 110 0 0 chr20 2548469 2548569 -69605313 - AluSp/q SINE Alu 0 313 214 225 269 103 26 chr20 2549256 2549334 -69604548 + LTR41 LTR ERVL 510 593 -180 1975 99 18 4 chr20 2549431 2549703 -69604179 - AluSq SINE Alu -36 277 2 898 206 104 28 chr20 2549946 2550284 -69603598 + MER58B DNA MER1_type 1 328 -13 3812 182 68 11 chr20 2550436 2550937 -69602945 + L1MB7 LINE L1 4625 5096 -1088 1814 130 53 33 chr20 2550937 2551236 -69602646 + AluJb SINE Alu 1 305 -7 3812 182 68 11 chr20 2551236 2551801 -69602081 + L1MB7 LINE L1 5096 5789 -395 1848 125 83 3 chr20 2551801 2552113 -69601769 - MER44D DNA MER2_type -2 607 1 3812 182 68 11 chr20 2552113 2552275 -69601607 + L1MB7 LINE L1 5789 5940 -244 538 195 120 25 chr20 2552317 2552517 -69601365 + L2 LINE L2 3008 3226 -87 190 286 143 71 chr20 2552625 2552765 -69601117 + MIR SINE MIR 35 184 -78 1178 264 131 64 chr20 2552766 2553457 -69600425 - L2 LINE L2 -373 2941 2197 2220 93 0 66 chr20 2553457 2553790 -69600092 + AluSx SINE Alu 1 311 -1 1178 264 131 64 chr20 2553790 2553832 -69600050 - L2 LINE L2 -1117 2197 2159 993 244 111 31 chr20 2553813 2554264 -69599618 - L2 LINE L2 -10 3303 2817 * 2294 100 0 3 chr20 2555574 2555875 -69598007 - AluSq SINE Alu -13 300 1 268 265 128 0 chr20 2555875 2555992 -69597890 - L2 LINE L2 -565 2749 2618 673 226 164 0 chr20 2556002 2556210 -69597672 + MIR SINE MIR 15 256 -6 2151 130 0 0 chr20 2556341 2556641 -69597241 - AluSx SINE Alu -12 300 1 842 111 0 15 chr20 2559735 2559870 -69594012 + FLAM_C SINE Alu 1 133 0 347 245 102 10 chr20 2560198 2560296 -69593586 - MIR SINE MIR -115 147 41 1298 91 0 17 chr20 2560389 2560564 -69593318 - AluSc SINE Alu -6 303 132 240 330 38 0 chr20 2560963 2561069 -69592813 - MIR SINE MIR -57 151 42 3329 208 111 50 chr20 2564159 2565859 -69588023 + L1MB5 LINE L1 3841 5647 -533 759 236 89 13 chr20 2565864 2566089 -69587793 + MER21B LTR ERV1 1 242 -621 545 211 0 0 chr20 2566127 2566222 -69587660 + LTR8A LTR ERV1 169 263 -464 351 176 118 0 chr20 2566227 2566295 -69587587 - LTR8 LTR ERV1 -613 78 3 1738 197 92 28 chr20 2566300 2566409 -69587473 + L1MB5 LINE L1 5677 5778 -396 1841 148 99 69 chr20 2566409 2566841 -69587041 - MER65A LTR ERV1 0 445 1 1738 197 92 28 chr20 2566841 2567199 -69586683 + L1MB5 LINE L1 5778 6174 0 2003 125 66 0 chr20 2567479 2567768 -69586114 - AluSx SINE Alu -4 308 1 2096 93 18 7 chr20 2568266 2568546 -69585336 + AluSx SINE Alu 11 293 -19 1124 117 0 19 chr20 2569142 2569304 -69584578 - FRAM SINE Alu -21 155 1 361 156 55 18 chr20 2569345 2569454 -69584428 + CT-rich Low_complexity Low_complexity 2 114 0 249 116 5 68 chr20 2569461 2569520 -69584362 - Alu SINE Alu 0 302 253 2008 46 4 4 chr20 2569968 2570208 -69583674 + AluSp SINE Alu 1 240 -73 189 0 0 0 chr20 2570221 2570242 -69583640 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 2064 108 27 17 chr20 2570623 2570919 -69582963 + AluSx SINE Alu 1 299 -13 297 303 113 30 chr20 2570930 2571161 -69582721 - L1MC/D LINE L1 -2215 5593 5344 193 105 0 53 chr20 2571176 2571214 -69582668 + L2 LINE L2 3207 3242 -71 279 0 0 0 chr20 2571236 2571267 -69582615 + (TGAA)n Simple_repeat Simple_repeat 1 31 0 227 209 0 0 chr20 2571271 2571314 -69582568 + MIR SINE MIR 105 147 -115 539 120 102 0 chr20 2571387 2571495 -69582387 - LTR52 LTR ERVL -67 354 236 2119 221 77 22 chr20 2571601 2572148 -69581734 + L1ME3A LINE L1 5594 6170 0 207 171 0 0 chr20 2572150 2572167 -69581715 + A-rich Low_complexity Low_complexity 1 17 -24 626 132 47 0 chr20 2572167 2572273 -69581609 + HY1 scRNA scRNA 1 111 -1 207 171 0 0 chr20 2572273 2572296 -69581586 + A-rich Low_complexity Low_complexity 16 41 0 891 272 59 49 chr20 2572417 2572843 -69581039 - L2 LINE L2 0 3313 2884 1657 230 120 56 chr20 2572846 2573466 -69580416 + LTR41 LTR ERVL 3 696 -99 2283 189 17 13 chr20 2573466 2573925 -69579957 + MER65C LTR ERV1 1 461 0 1657 230 120 56 chr20 2573925 2574032 -69579850 + LTR41 LTR ERVL 696 795 0 1029 285 88 25 chr20 2574038 2574550 -69579332 - L2 LINE L2 -436 2878 2335 1054 219 36 33 chr20 2574745 2574936 -69578946 + L1M4b LINE L1 1212 1401 -5458 212 0 36 0 chr20 2574936 2574964 -69578918 + (TC)n Simple_repeat Simple_repeat 1 29 0 * 270 81 0 0 chr20 2574963 2575000 -69578882 + (CA)n Simple_repeat Simple_repeat 1 37 0 1054 219 36 33 chr20 2574964 2575114 -69578768 + L1M4b LINE L1 1401 1518 -5341 386 191 43 11 chr20 2575145 2575239 -69578643 + L1M4b LINE L1 3475 3571 -3386 873 150 0 0 chr20 2575281 2575408 -69578474 - FLAM_C SINE Alu -6 127 1 4781 154 25 48 chr20 2575415 2576360 -69577522 - L1MD1 LINE L1 0 6740 5817 1570 115 196 8 chr20 2576360 2576620 -69577262 - AluSg1 SINE Alu 0 309 1 4781 154 25 48 chr20 2576620 2576649 -69577233 - L1MD1 LINE L1 -923 5817 5789 399 129 212 0 chr20 2576649 2576734 -69577148 - MER21-int LTR ERV1 -231 3960 3858 1823 214 83 41 chr20 2576734 2577287 -69576595 - L1MD1 LINE L1 -2400 4244 3659 2005 152 0 13 chr20 2577287 2577603 -69576279 - AluSx SINE Alu 0 312 1 1823 214 83 41 chr20 2577603 2577690 -69576192 - L1MD1 LINE L1 -2985 3659 3577 2303 79 7 0 chr20 2577694 2577984 -69575898 - AluSp SINE Alu -21 292 1 1066 176 80 73 chr20 2578007 2578354 -69575528 - MER66A LTR ERV1 -139 340 97 5173 201 58 61 chr20 2578406 2579643 -69574239 - L1MD1 LINE L1 -5108 1434 201 1831 172 7 0 chr20 2579643 2579951 -69573931 + AluJb SINE Alu 1 310 -2 5173 201 58 61 chr20 2579951 2580148 -69573734 - L1MD1 LINE L1 -6341 201 5 874 107 0 137 chr20 2580192 2580419 -69573463 + AluSg/x SINE Alu 136 339 0 2263 142 78 0 chr20 2580419 2580793 -69573089 + MER101 LTR ERV1 72 474 0 586 273 42 24 chr20 2580817 2581150 -69572732 - L1M4 LINE L1 -846 5300 4962 247 179 0 0 chr20 2581150 2581189 -69572693 - LTR47B LTR ERVL 0 443 405 1301 203 0 8 chr20 2581190 2581426 -69572456 - LTR47B LTR ERVL 0 443 210 262 189 0 34 chr20 2581436 2581495 -69572387 - LTR47B LTR ERVL -185 258 200 262 189 0 34 chr20 2581497 2581556 -69572326 - LTR47B LTR ERVL -185 258 200 247 189 0 34 chr20 2581558 2581617 -69572265 - LTR47B LTR ERVL -185 258 200 262 189 0 34 chr20 2581619 2581678 -69572204 - LTR47B LTR ERVL -185 258 200 232 171 0 0 chr20 2581680 2581715 -69572167 - LTR47A LTR ERVL -194 258 224 247 189 0 34 chr20 2581741 2581800 -69572082 - LTR47B LTR ERVL -185 258 200 262 189 0 34 chr20 2581802 2581861 -69572021 - LTR47B LTR ERVL -185 258 200 247 189 0 34 chr20 2581863 2581922 -69571960 - LTR47B LTR ERVL -185 258 200 262 189 0 34 chr20 2581924 2581983 -69571899 - LTR47B LTR ERVL -185 258 200 258 271 0 0 chr20 2581985 2582044 -69571838 - LTR47A LTR ERVL -194 258 200 262 189 0 34 chr20 2582046 2582105 -69571777 - LTR47B LTR ERVL -185 258 200 262 189 0 34 chr20 2582107 2582166 -69571716 - LTR47B LTR ERVL -185 258 200 262 189 0 34 chr20 2582168 2582227 -69571655 - LTR47B LTR ERVL -185 258 200 1060 208 4 79 chr20 2582229 2582508 -69571374 - LTR47A LTR ERVL -194 258 1 2163 110 17 0 chr20 2582527 2582826 -69571056 - AluSx SINE Alu -8 304 1 1888 261 119 11 chr20 2582831 2583628 -69570254 - L1M4 LINE L1 -1194 4952 4070 2155 132 0 6 chr20 2583675 2583986 -69569896 + AluSx SINE Alu 1 309 -3 568 252 19 7 chr20 2584644 2584799 -69569083 + MIR SINE MIR 14 170 -92 1884 212 32 63 chr20 2584959 2585496 -69568386 + MLT2B1 LTR ERVL 1 520 0 1610 250 108 43 chr20 2586019 2586507 -69567375 + MLT1G1 LTR MaLR 3 533 -62 2367 98 3 0 chr20 2586507 2586813 -69567069 - AluSp SINE Alu -6 307 1 1610 250 108 43 chr20 2586813 2586881 -69567001 + MLT1G1 LTR MaLR 533 595 0 286 303 8 91 chr20 2587207 2587260 -69566622 + L2 LINE L2 2952 3008 -305 687 261 58 43 chr20 2587260 2587517 -69566365 + MIR SINE MIR 2 262 0 286 303 8 91 chr20 2587517 2587595 -69566287 + L2 LINE L2 3008 3072 -241 1956 141 0 11 chr20 2587604 2587739 -69566143 + AluSx SINE Alu 1 136 -178 225 0 0 0 chr20 2587739 2587764 -69566118 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 1956 141 0 11 chr20 2587764 2587945 -69565937 + AluSx SINE Alu 136 314 0 1278 279 58 7 chr20 2588213 2588640 -69565242 + LTR16A LTR ERVL 2 450 0 1253 206 5 0 chr20 2589615 2589834 -69564048 + MER58A DNA MER1_type 5 224 0 5403 129 19 45 chr20 2590411 2590670 -69563212 - HSMAR2 DNA Mariner 0 1302 1038 2351 103 0 0 chr20 2590670 2590971 -69562911 + AluSx SINE Alu 1 301 -11 5403 129 19 45 chr20 2590971 2591285 -69562597 - HSMAR2 DNA Mariner -264 1038 759 2240 103 17 0 chr20 2591285 2591577 -69562305 - AluSx SINE Alu -15 297 1 5403 129 19 45 chr20 2591577 2591908 -69561974 - HSMAR2 DNA Mariner -543 759 421 463 258 30 0 chr20 2592437 2592569 -69561313 - MIR3 SINE MIR -39 169 34 2205 121 3 6 chr20 2592937 2593250 -69560632 + AluSx SINE Alu 1 312 0 180 318 257 6 chr20 2593263 2593442 -69560440 + L2 LINE L2 2831 3054 -218 198 331 63 14 chr20 2593472 2593614 -69560268 + L2 LINE L2 2951 3099 -173 385 229 7 13 chr20 2593779 2593932 -69559950 + (TGAA)n Simple_repeat Simple_repeat 1 152 0 580 159 12 29 chr20 2593948 2594118 -69559764 + (TGAA)n Simple_repeat Simple_repeat 2 168 0 243 286 57 9 chr20 2594941 2595046 -69558836 - MIR SINE MIR -79 183 74 202 103 0 0 chr20 2595204 2595233 -69558649 - L2 LINE L2 -18 3295 3267 2355 93 0 0 chr20 2595503 2595794 -69558088 - AluSc SINE Alu -16 293 3 197 130 0 22 chr20 2596134 2596160 -69557722 + (TAA)n Simple_repeat Simple_repeat 2 28 -18 2143 94 11 14 chr20 2596160 2596447 -69557435 + AluSx SINE Alu 1 286 -26 197 130 0 22 chr20 2596447 2596466 -69557416 + (TAA)n Simple_repeat Simple_repeat 28 46 0 318 271 74 0 chr20 2596467 2596589 -69557293 - MIR SINE MIR -1 261 131 22 70 0 0 chr20 2596591 2596634 -69557248 + AT_rich Low_complexity Low_complexity 1 43 0 193 365 0 0 chr20 2596643 2596728 -69557154 - MIR SINE MIR -2 260 176 527 125 0 0 chr20 2596742 2596822 -69557060 + MER5A DNA MER1_type 5 84 -105 1345 245 3 3 chr20 2597042 2597377 -69556505 + L1MC2 LINE L1 2638 2972 -3174 1046 161 0 0 chr20 2597377 2597538 -69556344 + AluJb SINE Alu 149 309 -3 9209 186 30 46 chr20 2597549 2599271 -69554611 + L1MC2 LINE L1 2954 4703 -1641 1370 161 48 20 chr20 2599271 2599563 -69554319 + L1MA4 LINE L1 5995 6294 -6 9209 186 30 46 chr20 2599563 2599768 -69554114 + L1MC2 LINE L1 4703 4910 -1434 14636 115 37 54 chr20 2599768 2599919 -69553963 + Tigger1 DNA MER2_type 1 153 -2265 1725 159 3 51 chr20 2599919 2600233 -69553649 - AluJo SINE Alu -13 299 1 14636 115 37 54 chr20 2600233 2602318 -69551564 + Tigger1 DNA MER2_type 153 2193 -225 1852 138 6 66 chr20 2602318 2602636 -69551246 - AluJb SINE Alu -13 299 1 14636 115 37 54 chr20 2602636 2602858 -69551024 + Tigger1 DNA MER2_type 2193 2417 -1 9209 186 30 46 chr20 2602858 2603146 -69550736 + L1MC2 LINE L1 4910 5201 -1143 2308 100 0 0 chr20 2603146 2603435 -69550447 - AluSx SINE Alu -23 289 1 9209 186 30 46 chr20 2603435 2604000 -69549882 + L1MC2 LINE L1 5201 5661 -683 2381 98 0 7 chr20 2604000 2604305 -69549577 + AluSc SINE Alu 1 303 -6 9209 186 30 46 chr20 2604305 2604976 -69548906 + L1MC2 LINE L1 5661 6342 -2 2406 69 0 7 chr20 2605018 2605322 -69548560 - AluY SINE Alu -9 302 1 370 253 230 37 chr20 2605445 2605793 -69548089 + L1ME4a LINE L1 5706 6120 -1 253 222 8 8 chr20 2606025 2606151 -69547731 + GA-rich Low_complexity Low_complexity 1 126 0 1784 81 0 9 chr20 2606269 2606490 -69547392 - AluSc SINE Alu -90 219 1 494 320 49 9 chr20 2606754 2606979 -69546903 + MIR SINE MIR 15 248 -14 1951 124 40 13 chr20 2606986 2607284 -69546598 + AluSg SINE Alu 1 306 -4 364 225 79 0 chr20 2607316 2607405 -69546477 - MER46C DNA MER2_type -23 315 220 223 192 0 0 chr20 2607520 2607566 -69546316 + MIR SINE MIR 105 149 -66 359 250 148 39 chr20 2608124 2608252 -69545630 + MER102a DNA MER1_type 10 151 -179 517 206 32 65 chr20 2608347 2608519 -69545363 - MIR SINE MIR -27 181 6 1451 187 74 0 chr20 2608539 2608796 -69545086 + MER66A LTR ERV1 1 276 -202 928 223 5 27 chr20 2608807 2609027 -69544855 - L1M4 LINE L1 -1191 4955 4741 248 173 0 19 chr20 2609031 2609083 -69544799 - Alu SINE Alu 0 302 252 * 1024 162 24 0 chr20 2609073 2609240 -69544642 + MER66A LTR ERV1 278 448 -30 337 293 83 32 chr20 2609233 2609390 -69544492 + MER102a DNA MER1_type 166 330 0 * 313 317 170 7 chr20 2609410 2609710 -69544172 + L2 LINE L2 2248 2596 -718 186 212 0 0 chr20 2609778 2609811 -69544071 + MIR SINE MIR 117 149 -113 222 175 0 0 chr20 2610164 2610204 -69543678 + L2 LINE L2 3024 3063 -250 4516 150 41 18 chr20 2610204 2611055 -69542827 - L1MB8 LINE L1 0 6178 5308 673 170 0 0 chr20 2611056 2611168 -69542714 - FLAM_C SINE Alu -4 139 28 4412 186 22 75 chr20 2611220 2611852 -69542030 - L1MB8 LINE L1 -837 5309 4764 1479 191 33 26 chr20 2611852 2612156 -69541726 - AluJb SINE Alu -6 306 1 4412 186 22 75 chr20 2612156 2612688 -69541194 - L1MB8 LINE L1 -1382 4764 4206 2796 126 20 11 chr20 2612774 2613233 -69540649 - L1MB3 LINE L1 -7 6176 5714 233 143 0 0 chr20 2613234 2613269 -69540613 - 5S rRNA rRNA -85 36 2 932 117 0 0 chr20 2613271 2613408 -69540474 - L1MB3 LINE L1 -455 5728 5592 * 957 222 25 21 chr20 2613403 2613642 -69540240 - L1MB3 LINE L1 -1037 5109 4870 * 3098 209 14 64 chr20 2613610 2614481 -69539401 - L1MB8 LINE L1 -1980 4166 3340 2837 217 68 42 chr20 2614511 2614575 -69539307 - MER21B LTR ERV1 -70 793 732 192 77 0 0 chr20 2614575 2614601 -69539281 + (CAATT)n Simple_repeat Simple_repeat 1 26 0 2837 217 68 42 chr20 2614601 2615291 -69538591 - MER21B LTR ERV1 -131 732 20 2356 225 47 19 chr20 2615313 2615546 -69538336 - L1MB8 LINE L1 -2804 3342 3117 2206 120 7 10 chr20 2615546 2615855 -69538027 - AluSx SINE Alu -4 308 1 2356 225 47 19 chr20 2615855 2616319 -69537563 - L1MB8 LINE L1 -3029 3117 2625 435 253 129 39 chr20 2616360 2616538 -69537344 + L2 LINE L2 3102 3295 -18 522 269 0 44 chr20 2616685 2616845 -69537037 - L2 LINE L2 0 3313 3161 180 316 0 0 chr20 2616933 2616990 -69536892 - L2 LINE L2 -309 2963 2907 188 255 121 64 chr20 2617181 2617322 -69536560 + L2 LINE L2 2949 3097 -175 476 263 60 0 chr20 2617521 2617654 -69536228 + MIR SINE MIR 2 142 -120 2037 137 17 0 chr20 2617655 2617948 -69535934 - AluSx SINE Alu -14 298 1 23 54 0 0 chr20 2617949 2617986 -69535896 + AT_rich Low_complexity Low_complexity 1 37 0 275 286 105 71 chr20 2618122 2618360 -69535522 + MIR SINE MIR 2 247 -15 2325 88 16 0 chr20 2618423 2618731 -69535151 - AluSq SINE Alu 0 313 1 1359 163 0 9 chr20 2618777 2618992 -69534890 - AluJb SINE Alu -15 297 85 432 252 17 17 chr20 2619803 2619918 -69533964 - MER5B DNA MER1_type 0 178 64 879 207 45 41 chr20 2619923 2620294 -69533588 + MLT1H LTR MaLR 1 496 -53 2358 110 0 0 chr20 2620344 2620644 -69533238 + AluSq SINE Alu 1 300 -13 337 274 42 0 chr20 2621223 2621318 -69532564 + MLT1I LTR MaLR 63 161 -248 2353 106 0 3 chr20 2621526 2621837 -69532045 - AluSg SINE Alu 0 310 1 2572 281 97 39 chr20 2621844 2622656 -69531226 - L2 LINE L2 -46 3267 2504 2397 79 3 0 chr20 2622656 2622948 -69530934 + AluSp SINE Alu 1 293 -20 2572 281 97 39 chr20 2622948 2623590 -69530292 - L2 LINE L2 -809 2504 1728 197 253 165 55 chr20 2623818 2623909 -69529973 - L2 LINE L2 -31 3241 3141 2194 108 3 0 chr20 2623932 2624228 -69529654 + AluSp SINE Alu 1 297 -16 729 239 17 60 chr20 2624500 2624734 -69529148 - MIR SINE MIR -11 251 28 1489 170 61 0 chr20 2624735 2624982 -69528900 - AluJb SINE Alu -50 262 1 2898 13 0 0 chr20 2625043 2625352 -69528530 + AluYa5 SINE Alu 3 311 0 618 201 27 85 chr20 2625806 2626030 -69527852 + L1MC5 LINE L1 7639 7849 -112 43988 44 5 2 chr20 2626683 2632816 -69521066 + L1PA4 LINE L1 3 6155 0 2493 63 3 3 chr20 2632839 2633142 -69520740 + AluSp SINE Alu 1 303 -10 187 370 0 0 chr20 2633320 2633393 -69520489 - MIR SINE MIR 0 262 190 382 191 61 69 chr20 2633570 2633701 -69520181 + L1MC5 LINE L1 7800 7929 -32 359 102 0 102 chr20 2635442 2635530 -69518352 + FRAM/FAM SINE Alu 1 78 -88 25 31 0 0 chr20 2635535 2635567 -69518315 + AT_rich Low_complexity Low_complexity 1 32 0 2217 225 86 22 chr20 2635652 2636318 -69517564 + MER67C LTR ERV1 3 710 0 3040 112 38 42 chr20 2636534 2636960 -69516922 - LOR1a LTR ERV1 0 497 72 1976 153 13 3 chr20 2636960 2637267 -69516615 - AluJb SINE Alu -2 310 1 3040 112 38 42 chr20 2637267 2637339 -69516543 - LOR1a LTR ERV1 -425 72 1 398 171 13 0 chr20 2637463 2637539 -69516343 + L1MC1 LINE L1 6257 6333 0 3377 224 62 4 chr20 2637645 2638586 -69515296 + L1MC4a LINE L1 4009 5064 -1082 1548 91 0 0 chr20 2638586 2638773 -69515109 + AluSg/x SINE Alu 111 297 -15 614 212 114 61 chr20 2639174 2639419 -69514463 + MLT1J LTR MaLR 162 419 -92 623 192 64 8 chr20 2639419 2639544 -69514338 - AluJb SINE Alu -179 133 2 405 224 41 0 chr20 2639547 2639645 -69514237 + MLT1J LTR MaLR 410 511 0 721 251 18 0 chr20 2639685 2639848 -69514034 + MER5B DNA MER1_type 1 166 -12 548 310 138 30 chr20 2639855 2640281 -69513601 + MLT1L LTR MaLR 144 615 0 244 226 117 109 chr20 2640338 2640350 -69513532 + L1MC4a LINE L1 5664 5674 -2134 1266 107 107 10 chr20 2640350 2640556 -69513326 - MER30 DNA MER1_type -1 229 4 244 226 117 109 chr20 2640556 2640639 -69513243 + L1MC4a LINE L1 5674 5755 -2053 1714 94 150 4 chr20 2640639 2640893 -69512989 + AluSx SINE Alu 1 291 -11 244 226 117 109 chr20 2640893 2641053 -69512829 + L1MC4a LINE L1 5755 5922 -1886 225 0 0 0 chr20 2641096 2641121 -69512761 + (TG)n Simple_repeat Simple_repeat 2 26 0 36 0 0 0 chr20 2641202 2641238 -69512644 + AT_rich Low_complexity Low_complexity 1 36 0 460 213 9 19 chr20 2642053 2642161 -69511721 + LTR16A1 LTR ERVL 19 125 -332 968 224 40 0 chr20 2642198 2642426 -69511456 + LTR16A1 LTR ERVL 221 457 0 434 198 41 83 chr20 2642619 2642703 -69511179 - Charlie4a DNA MER1_type -1453 508 429 2415 64 10 3 chr20 2642703 2643000 -69510882 + AluY SINE Alu 1 299 -12 434 198 41 83 chr20 2643000 2643036 -69510846 - Charlie4a DNA MER1_type -1532 429 393 1189 191 37 0 chr20 2643050 2643265 -69510617 + AluJo SINE Alu 82 304 -8 1392 208 41 19 chr20 2643271 2643589 -69510293 - Charlie4a DNA MER1_type -167 341 17 1778 81 0 0 chr20 2644213 2644434 -69509448 + AluSx SINE Alu 1 221 -91 428 322 76 12 chr20 2644873 2645044 -69508838 - MER5A DNA MER1_type -1 188 7 2056 40 84 71 chr20 2645121 2645417 -69508465 + AluY SINE Alu 1 300 -11 1322 140 15 0 chr20 2645429 2645629 -69508253 - AluJb SINE Alu -23 289 87 2006 118 9 43 chr20 2647321 2647505 -69506377 - AluSx SINE Alu 0 312 142 2286 99 0 13 chr20 2647505 2647808 -69506074 - AluSg SINE Alu -9 301 3 2006 118 9 43 chr20 2647808 2647946 -69505936 - AluSx SINE Alu -170 142 1 853 218 96 13 chr20 2648268 2648497 -69505385 - MLT1C LTR MaLR 0 467 220 498 163 23 0 chr20 2648557 2648643 -69505239 - MLT1C LTR MaLR -383 122 35 199 363 62 27 chr20 2648729 2648875 -69505007 + L2 LINE L2 3116 3266 -6 1840 100 0 4 chr20 2649028 2649268 -69504614 + AluSx SINE Alu 44 282 -30 285 29 0 0 chr20 2649271 2649305 -69504577 + (CA)n Simple_repeat Simple_repeat 1 34 0 2112 87 24 13 chr20 2656530 2656828 -69497054 + AluSg SINE Alu 1 301 -9 367 207 96 67 chr20 2657280 2657415 -69496467 - MER5B DNA MER1_type -35 143 5 208 139 0 0 chr20 2658459 2658495 -69495387 + (T)n Simple_repeat Simple_repeat 1 36 0 1877 90 94 4 chr20 2659314 2659580 -69494302 + AluSx SINE Alu 23 312 0 245 219 0 16 chr20 2659656 2659720 -69494162 + (TA)n Simple_repeat Simple_repeat 2 64 0 191 186 0 93 chr20 2660009 2660052 -69493830 + L3 LINE CR1 596 634 -943 267 304 163 11 chr20 2660329 2660513 -69493369 + MLT1H1 LTR MaLR 334 545 -10 354 260 106 0 chr20 2660521 2660625 -69493257 + MIR SINE MIR 39 153 -55 246 234 0 0 chr20 2660631 2660678 -69493204 - L2 LINE L2 0 3272 3226 203 189 0 0 chr20 2660690 2660727 -69493155 + L2 LINE L2 3264 3300 -13 1754 160 35 3 chr20 2660853 2661140 -69492742 - AluJo SINE Alu -16 296 1 1085 104 0 0 chr20 2661140 2661275 -69492607 - AluSq/x SINE Alu -177 135 1 358 59 59 0 chr20 2661275 2661326 -69492556 - L1MA2 LINE L1 -473 5831 5778 1749 100 80 12 chr20 2661327 2661478 -69492404 - AluSg SINE Alu -9 301 125 2387 66 0 7 chr20 2661478 2661835 -69492047 - AluY SINE Alu 0 311 1 1749 100 80 12 chr20 2661835 2661933 -69491949 - AluSg SINE Alu -185 125 35 1090 113 7 0 chr20 2661936 2662086 -69491796 - AluSq/x SINE Alu -161 151 1 594 80 0 10 chr20 2662086 2662186 -69491696 - L1MA2 LINE L1 -939 5366 5268 855 111 0 22 chr20 2662187 2662322 -69491560 + MER46A DNA MER2_type 105 236 0 2229 92 7 0 chr20 2663037 2663368 -69490514 + AluSx SINE Alu 1 333 0 282 295 62 16 chr20 2663755 2663884 -69489998 - MIR SINE MIR -1 261 127 1845 145 35 10 chr20 2664156 2664445 -69489437 - AluJb SINE Alu -16 296 1 526 293 98 5 chr20 2664445 2664643 -69489239 - L1MEc LINE L1 -4023 2373 2154 2174 124 7 0 chr20 2664679 2664977 -69488905 - AluSp SINE Alu -13 300 1 21 0 0 0 chr20 2664988 2665009 -69488873 + AT_rich Low_complexity Low_complexity 1 21 0 264 320 32 48 chr20 2665011 2665037 -69488845 - L1MEc LINE L1 -5574 631 606 2616 138 16 36 chr20 2665037 2665480 -69488402 + Tigger2a DNA MER2_type 1 434 0 264 320 32 48 chr20 2665480 2665578 -69488304 - L1MEc LINE L1 -5599 606 509 250 215 25 63 chr20 2665726 2665805 -69488077 + LTR16A1 LTR ERVL 3 78 -379 2541 96 0 0 chr20 2666068 2666380 -69487502 - AluSx SINE Alu 0 312 1 2848 181 29 22 chr20 2666431 2666984 -69486898 + MLT1F1 LTR MaLR 11 567 0 618 171 99 9 chr20 2668271 2668382 -69485500 - FLAM_C SINE Alu -21 122 2 1912 154 25 0 chr20 2668387 2668673 -69485209 - AluJo SINE Alu -19 293 1 188 368 84 0 chr20 2669575 2669670 -69484212 + MIR SINE MIR 86 188 -74 476 230 62 19 chr20 2669939 2670100 -69483782 + MLT1J2 LTR MaLR 269 436 -14 2067 108 3 46 chr20 2670187 2670493 -69483389 + AluSx SINE Alu 1 293 -19 263 61 0 0 chr20 2670711 2670744 -69483138 - U2 snRNA snRNA -155 33 1 7098 118 60 23 chr20 2670844 2671288 -69482594 - Tigger3b DNA MER2_type -1801 1227 801 2319 83 0 3 chr20 2671288 2671577 -69482305 + AluSg SINE Alu 1 288 -22 7098 118 60 23 chr20 2671577 2672114 -69481768 - Tigger3b DNA MER2_type -2227 801 192 2424 52 0 52 chr20 2672114 2672423 -69481459 - AluY SINE Alu -18 293 1 7098 118 60 23 chr20 2672423 2672621 -69481261 - Tigger3b DNA MER2_type -2836 192 3 342 263 224 17 chr20 2672640 2672819 -69481063 - MIR SINE MIR -13 249 34 2303 92 7 3 chr20 2673081 2673376 -69480506 - AluSx SINE Alu -16 296 1 1994 93 56 15 chr20 2673572 2673864 -69480018 + AluSc SINE Alu 1 303 0 357 24 0 0 chr20 2673981 2674023 -69479859 + (TG)n Simple_repeat Simple_repeat 2 43 0 230 343 29 64 chr20 2674878 2675050 -69478832 - MIR SINE MIR -11 251 86 225 275 0 66 chr20 2675739 2675830 -69478052 - MIR SINE MIR -112 150 66 6925 211 48 58 chr20 2676504 2677594 -69476288 + L1ME3A LINE L1 5 1104 -5540 2345 95 10 3 chr20 2677594 2677898 -69475984 + AluSg SINE Alu 1 306 -4 6925 211 48 58 chr20 2677898 2678245 -69475637 + L1ME3A LINE L1 1104 1453 -5191 1590 120 5 0 chr20 2678245 2678461 -69475421 + AluSg/x SINE Alu 82 298 -12 6925 211 48 58 chr20 2678461 2679638 -69474244 + L1ME3A LINE L1 1453 2804 -3840 1723 200 3 7 chr20 2679638 2679943 -69473939 - AluJo SINE Alu -8 304 1 6925 211 48 58 chr20 2679943 2680262 -69473620 + L1ME3A LINE L1 2804 3124 -3520 952 247 9 9 chr20 2680471 2680694 -69473188 - MER58A DNA MER1_type -1 223 1 721 303 17 6 chr20 2680733 2680908 -69472974 + MER91A DNA MER1_type 19 195 -1 2653 34 0 0 chr20 2681368 2681662 -69472220 - AluY SINE Alu -17 294 1 2298 124 27 24 chr20 2681663 2682035 -69471847 - THE1C LTR MaLR -2 373 1 562 307 99 16 chr20 2682041 2682299 -69471583 + L1ME3A LINE L1 4795 5079 -1565 2348 111 0 0 chr20 2682299 2682597 -69471285 - AluSx SINE Alu -14 298 1 562 307 99 16 chr20 2682597 2682643 -69471239 + L1ME3A LINE L1 5079 5120 -1524 483 292 92 41 chr20 2682695 2683086 -69470796 + L1ME LINE L1 863 1273 -5658 2421 139 37 49 chr20 2683259 2683691 -69470191 + LTR3 LTR ERVK 3 429 0 1319 236 275 13 chr20 2683850 2684312 -69469570 + MLT1G1 LTR MaLR 13 595 0 271 260 113 40 chr20 2684364 2684593 -69469289 + L1ME LINE L1 1264 1479 -4944 564 306 71 3 chr20 2684646 2684943 -69468939 + L1ME3A LINE L1 6056 6372 -296 324 297 65 36 chr20 2684979 2685117 -69468765 + HAL1 LINE L1 2292 2433 -74 283 268 14 0 chr20 2685384 2685455 -69468427 - L2 LINE L2 -5 3267 3196 563 195 371 0 chr20 2685789 2685999 -69467883 + LTR16C LTR ERVL 202 489 -2 2196 109 10 3 chr20 2686933 2687227 -69466655 - AluSx SINE Alu -16 296 1 634 186 83 0 chr20 2687297 2687453 -69466429 - MER3 DNA MER1_type -79 130 9 306 195 25 200 chr20 2687480 2687680 -69466202 + MIR SINE MIR 89 253 -9 2246 105 0 40 chr20 2687774 2688097 -69465785 - AluSx SINE Alu -2 310 1 1709 222 68 44 chr20 2688098 2688557 -69465325 + Cheshire DNA MER1_type 42 511 -1909 542 154 94 8 chr20 2688557 2688674 -69465208 - MLT1D LTR MaLR 0 505 379 349 252 8 76 chr20 2688676 2688795 -69465087 - MLT1-int LTR MaLR -247 1124 1014 1515 108 10 0 chr20 2688797 2689001 -69464881 - AluSq SINE Alu -12 301 96 434 192 69 23 chr20 2689046 2689097 -69464785 - MLT1D LTR MaLR -259 246 199 2430 88 0 3 chr20 2689097 2689402 -69464480 - AluSg SINE Alu -6 304 1 434 192 69 23 chr20 2689402 2689480 -69464402 - MLT1D LTR MaLR -306 199 111 843 209 5 56 chr20 2689481 2689696 -69464186 - MLT1D-int LTR MaLR -207 1164 961 850 273 5 0 chr20 2689838 2690047 -69463835 - MLT1D-int LTR MaLR -488 883 674 1079 174 4 85 chr20 2690106 2690365 -69463517 - MLT1D-int LTR MaLR -711 660 423 1147 181 0 0 chr20 2690375 2690552 -69463330 - AluJb SINE Alu -1 311 135 1187 253 57 38 chr20 2690980 2691403 -69462479 + LTR47B LTR ERVL 13 443 0 345 214 34 0 chr20 2691424 2691513 -69462369 + MER96 DNA MER1_type? 1 92 -83 283 272 0 72 chr20 2691606 2691731 -69462151 + MER103 DNA DNA 50 165 -1 728 213 64 50 chr20 2692076 2692131 -69461751 - MER3 DNA MER1_type 0 209 156 2803 99 60 26 chr20 2692131 2692472 -69461410 + L1MA4 LINE L1 5818 6181 -119 2112 147 0 0 chr20 2692472 2692772 -69461110 + AluSx SINE Alu 1 300 -12 2803 99 60 26 chr20 2692772 2692893 -69460989 + L1MA4 LINE L1 6181 6296 -4 728 213 64 50 chr20 2692893 2693039 -69460843 - MER3 DNA MER1_type -53 156 5 333 221 19 32 chr20 2693882 2694036 -69459846 + CT-rich Low_complexity Low_complexity 3 154 0 306 314 66 16 chr20 2694119 2694240 -69459642 - MIR3 SINE MIR -46 162 36 201 121 0 0 chr20 2694348 2694381 -69459501 + (GA)n Simple_repeat Simple_repeat 2 34 0 2202 108 7 0 chr20 2695152 2695438 -69458444 - AluSx SINE Alu -20 292 5 29 28 0 0 chr20 2695446 2695482 -69458400 + AT_rich Low_complexity Low_complexity 1 36 0 374 258 122 52 chr20 2695497 2695875 -69458007 - L1M4 LINE L1 -1038 5108 4701 1704 162 88 0 chr20 2695875 2696159 -69457723 - AluJo SINE Alu -3 309 1 374 258 122 52 chr20 2696159 2696229 -69457653 - L1M4 LINE L1 -1445 4701 4637 1029 140 0 0 chr20 2698518 2698696 -69455186 + (TCCA)n Simple_repeat Simple_repeat 1 178 0 197 381 69 38 chr20 2698704 2698995 -69454887 - L2 LINE L2 -2 3270 2971 54 49 0 0 chr20 2699746 2699828 -69454054 + AT_rich Low_complexity Low_complexity 1 82 0 2246 94 10 19 chr20 2700334 2700641 -69453241 + AluSg SINE Alu 1 304 -6 254 269 148 34 chr20 2701310 2701459 -69452423 + MIR SINE MIR 26 191 -71 287 281 31 31 chr20 2701525 2701621 -69452261 - L2 LINE L2 -19 3294 3199 2188 124 0 0 chr20 2701855 2702192 -69451690 + AluSx SINE Alu 1 337 0 2382 88 13 3 chr20 2702334 2702640 -69451242 - AluSq SINE Alu -4 309 1 23 0 0 0 chr20 2702693 2702716 -69451166 + AT_rich Low_complexity Low_complexity 1 23 0 228 67 0 0 chr20 2703572 2703602 -69450280 + (A)n Simple_repeat Simple_repeat 1 30 0 363 260 32 76 chr20 2703701 2703923 -69449959 + HAL1b LINE L1 59 263 -1085 2295 106 0 0 chr20 2703923 2704232 -69449650 + AluSx SINE Alu 1 309 0 363 260 32 76 chr20 2704232 2704350 -69449532 + HAL1b LINE L1 263 385 -963 249 286 66 22 chr20 2704419 2704510 -69449372 - L1MEd LINE L1 -5448 671 577 1788 126 74 95 chr20 2704809 2705189 -69448693 + MLT1B LTR MaLR 3 374 -16 2766 197 134 41 chr20 2705265 2706001 -69447881 - MER21B LTR ERV1 -58 805 1 363 310 57 7 chr20 2706907 2707135 -69446747 - L1MEc LINE L1 -3860 2394 2152 737 248 142 77 chr20 2707212 2707655 -69446227 - MLT1H LTR MaLR -64 485 14 352 322 76 9 chr20 2707746 2707957 -69445925 + L1M4 LINE L1 4712 4936 -1210 212 307 60 53 chr20 2708582 2708637 -69445245 - MIR SINE MIR -13 249 196 2184 98 35 0 chr20 2708637 2708924 -69444958 - AluSp SINE Alu -16 297 1 212 307 60 53 chr20 2708924 2709018 -69444864 - MIR SINE MIR -66 196 99 731 186 69 72 chr20 2709018 2709092 -69444790 - L1M4 LINE L1 -1546 4600 4527 1165 208 23 0 chr20 2709092 2709308 -69444574 - MER58A DNA MER1_type -3 221 1 731 186 69 72 chr20 2709308 2709468 -69444414 - L1M4 LINE L1 -1619 4527 4365 2264 99 6 43 chr20 2709468 2709646 -69444236 - AluSx SINE Alu 0 312 150 2424 74 0 7 chr20 2709646 2709942 -69443940 - AluY SINE Alu -17 294 1 2264 99 6 43 chr20 2709942 2710087 -69443795 - AluSx SINE Alu -162 150 1 731 186 69 72 chr20 2710087 2710157 -69443725 - L1M4 LINE L1 -1781 4365 4296 272 121 40 20 chr20 2710741 2710939 -69442943 + AluJo SINE Alu 1 302 0 180 0 0 0 chr20 2711167 2711187 -69442695 + (T)n Simple_repeat Simple_repeat 1 20 0 849 158 0 8 chr20 2711211 2711344 -69442538 - AluSg/x SINE Alu -26 284 153 559 86 0 0 chr20 2711344 2711414 -69442468 + AluSq/x SINE Alu 59 128 -185 201 39 0 0 chr20 2711601 2711627 -69442255 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 2008 109 33 7 chr20 2711775 2712088 -69441794 + AluSx SINE Alu 1 320 0 719 73 0 0 chr20 2712279 2712375 -69441507 - L1PB1 LINE L1 0 6151 6056 655 236 43 0 chr20 2712410 2712571 -69441311 + MER5B DNA MER1_type 5 172 -6 2031 135 0 32 chr20 2712685 2712997 -69440885 + AluSq SINE Alu 1 302 -11 348 24 0 0 chr20 2713724 2713765 -69440117 + (CA)n Simple_repeat Simple_repeat 2 42 0 2320 96 0 3 chr20 2713832 2714133 -69439749 - AluSx SINE Alu -12 300 1 231 152 0 0 chr20 2714137 2714183 -69439699 + MADE1 DNA Mariner 35 80 0 419 289 14 7 chr20 2715166 2715308 -69438574 + L2 LINE L2 2869 3011 -302 2177 139 0 0 chr20 2715955 2716257 -69437625 + AluSx SINE Alu 1 302 -10 280 322 100 31 chr20 2716457 2716848 -69437034 - L2 LINE L2 -337 2977 2560 1682 146 90 36 chr20 2717126 2717482 -69436400 + THE1C LTR MaLR 1 375 0 2236 116 7 0 chr20 2718317 2718611 -69435271 - AluSq SINE Alu -17 296 1 277 186 0 17 chr20 2718641 2718700 -69435182 - L1ME4a LINE L1 -4 6117 6060 1919 154 3 13 chr20 2718703 2719060 -69434822 - AluJb SINE Alu 0 354 1 281 296 52 28 chr20 2719072 2719389 -69434493 - L1ME4a LINE L1 -80 6041 5659 283 294 110 41 chr20 2719396 2719985 -69433897 - L1ME4a LINE L1 -1548 4598 3969 846 248 24 16 chr20 2720267 2720513 -69433369 - L1ME3A LINE L1 -219 5951 5704 314 302 8 31 chr20 2720399 2720514 -69433368 - L1PA8A LINE L1 -313 5818 5705 * 2431 69 0 0 chr20 2720514 2720804 -69433078 + AluY SINE Alu 1 290 -21 314 302 8 31 chr20 2720804 2720817 -69433065 - L1PA8A LINE L1 -426 5705 5693 531 139 0 0 chr20 2721079 2721158 -69432724 + AluJb SINE Alu 38 116 -196 486 0 0 0 chr20 2721158 2721212 -69432670 + (CA)n Simple_repeat Simple_repeat 1 54 0 377 267 52 33 chr20 2721406 2721731 -69432151 + L1MEd LINE L1 1011 1347 -5025 285 51 0 0 chr20 2721760 2721799 -69432083 + (CA)n Simple_repeat Simple_repeat 2 40 0 335 250 38 50 chr20 2721808 2721951 -69431931 + L1MEd LINE L1 1251 1510 -4862 2295 180 90 14 chr20 2721960 2722524 -69431358 - MLT1E2 LTR MaLR -4 622 1 1986 101 3 20 chr20 2722570 2722876 -69431006 + L1MA8 LINE L1 5988 6288 -3 827 231 61 4 chr20 2722913 2723190 -69430692 + L1M4 LINE L1 3579 3871 -2275 306 263 100 50 chr20 2723344 2723664 -69430218 + L1MEd LINE L1 2910 3245 -3137 2586 140 34 5 chr20 2723681 2724095 -69429787 + MSTB LTR MaLR 1 426 0 679 251 40 87 chr20 2724095 2724441 -69429441 + MLT1E-int LTR MaLR 1037 1366 -5 1166 239 50 119 chr20 2724446 2725083 -69428799 + MLT1E LTR MaLR 1 593 0 1866 209 33 72 chr20 2725140 2725688 -69428194 + L1ME1 LINE L1 5652 6334 0 2817 13 0 0 chr20 2726017 2726320 -69427562 - AluYa5 SINE Alu -8 303 1 504 262 36 42 chr20 2726455 2726499 -69427383 - MER5B DNA MER1_type -1 177 134 1574 240 110 41 chr20 2726499 2726723 -69427159 - MLT1E LTR MaLR 0 593 386 2264 112 3 0 chr20 2726723 2727019 -69426863 + AluSg SINE Alu 1 297 -13 1574 240 110 41 chr20 2727019 2727349 -69426533 - MLT1E LTR MaLR -207 386 1 504 262 36 42 chr20 2727349 2727472 -69426410 - MER5B DNA MER1_type -44 134 11 2001 145 0 0 chr20 2727707 2727989 -69425893 + AluSx SINE Alu 1 282 -30 29 0 0 0 chr20 2727995 2728024 -69425858 + AT_rich Low_complexity Low_complexity 1 29 0 852 226 0 0 chr20 2729736 2729891 -69423991 + FRAM SINE Alu 1 155 -21 322 113 81 0 chr20 2730163 2730225 -69423657 + MADE1 DNA Mariner 2 68 -12 255 24 122 0 chr20 2730269 2730310 -69423572 + MADE1 DNA Mariner 35 80 0 267 348 56 17 chr20 2730582 2730760 -69423122 - MIR SINE MIR -39 223 39 2185 110 0 7 chr20 2730763 2731106 -69422776 + AluSx SINE Alu 5 345 0 2195 109 3 0 chr20 2732159 2732444 -69421438 - AluSx SINE Alu -26 286 1 1647 122 76 11 chr20 2732580 2732843 -69421039 - AluJb SINE Alu -22 290 11 982 112 0 0 chr20 2733142 2733267 -69420615 + AluSq/x SINE Alu 1 125 -187 2313 104 3 0 chr20 2733275 2733582 -69420300 + AluSx SINE Alu 1 308 -4 507 206 71 0 chr20 2734838 2734964 -69418918 + L1MB1 LINE L1 6034 6168 0 305 346 66 50 chr20 2734971 2735289 -69418593 + L1MC/D LINE L1 5415 5737 -2071 344 294 85 103 chr20 2735367 2735459 -69418423 + L1M4 LINE L1 3211 3303 -2843 2130 104 49 0 chr20 2735459 2735746 -69418136 + AluSx SINE Alu 3 303 -9 344 294 85 103 chr20 2735746 2736276 -69417606 + L1M4 LINE L1 3303 3822 -2324 537 345 96 26 chr20 2736295 2736623 -69417259 + L1M4 LINE L1 3913 4217 -1929 2699 45 0 0 chr20 2736623 2736934 -69416948 + AluY SINE Alu 1 311 0 537 345 96 26 chr20 2736934 2737333 -69416549 + L1M4 LINE L1 4217 4691 -1455 646 166 0 146 chr20 2737360 2737565 -69416317 + FAM SINE Alu 1 42 -7 356 280 0 11 chr20 2738418 2738511 -69415371 + L2 LINE L2 3192 3283 -30 513 158 0 192 chr20 2738559 2738635 -69415247 + MLT1E3 LTR MaLR 51 75 -551 833 147 8 0 chr20 2738635 2738764 -69415118 - FLAM_C SINE Alu -3 130 1 513 158 0 192 chr20 2738764 2738864 -69415018 + MLT1E3 LTR MaLR 75 193 -433 6642 182 20 11 chr20 2738864 2738931 -69414951 - L1P4 LINE L1 -573 5593 5528 212 0 36 0 chr20 2738931 2738959 -69414923 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 6642 182 20 11 chr20 2738959 2740052 -69413830 - L1P4 LINE L1 -638 5528 4411 189 0 0 0 chr20 2740052 2740073 -69413809 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 6642 182 20 11 chr20 2740073 2740570 -69413312 - L1P4 LINE L1 -1755 4411 3920 1115 209 26 9 chr20 2740638 2740868 -69413014 + MLT1E3 LTR MaLR 391 624 0 529 172 11 11 chr20 2740866 2740959 -69412923 - Tigger5 DNA MER2_type 0 2323 2231 * 297 197 42 14 chr20 2741002 2741073 -69412809 - Tigger5 DNA MER2_type 0 2323 2251 * 298 231 0 0 chr20 2741042 2741094 -69412788 - Tigger5 DNA MER2_type -2268 55 4 483 238 89 55 chr20 2741201 2741403 -69412479 - MER63A DNA MER1_type 0 210 2 5386 175 160 110 chr20 2742173 2742785 -69411097 - L1MDa LINE L1 -4715 1825 1245 820 163 7 14 chr20 2742785 2742926 -69410956 + FLAM_C SINE Alu 2 141 -2 5386 175 160 110 chr20 2742926 2743894 -69409988 - L1MDa LINE L1 -5295 1245 18 350 239 148 21 chr20 2744165 2744307 -69409575 - MIR SINE MIR 0 262 103 2097 139 7 0 chr20 2744423 2744724 -69409158 - AluSx SINE Alu -8 304 2 777 122 0 16 chr20 2744962 2745085 -69408797 + FLAM_C SINE Alu 23 143 0 718 237 137 19 chr20 2745086 2745297 -69408585 + MIR SINE MIR 23 258 -4 190 273 62 62 chr20 2745441 2745569 -69408313 - L2 LINE L2 -229 3043 2916 2499 67 0 0 chr20 2746033 2746332 -69407550 + AluY SINE Alu 1 299 -12 684 215 14 96 chr20 2746373 2746433 -69407449 - MER3 DNA MER1_type -8 201 138 1071 150 45 0 chr20 2746433 2746455 -69407427 - L1MA8 LINE L1 0 6291 6271 1634 178 3 3 chr20 2746455 2746748 -69407134 + AluJo SINE Alu 1 293 -19 1071 150 45 0 chr20 2746748 2746945 -69406937 - L1MA8 LINE L1 -20 6271 6062 684 215 14 96 chr20 2746945 2747103 -69406779 - MER3 DNA MER1_type -71 138 1 2121 104 0 0 chr20 2747509 2747806 -69406076 - AluSx SINE Alu -2 310 14 2149 213 31 9 chr20 2748862 2749412 -69404470 - Charlie5 DNA MER1_type 0 2624 2063 645 195 42 0 chr20 2749408 2749526 -69404356 - MER3 DNA MER1_type -55 154 32 * 2384 70 0 0 chr20 2749629 2749927 -69403955 - AluY SINE Alu -13 298 1 246 247 52 0 chr20 2751172 2751249 -69402633 - MIR3 SINE MIR -15 193 113 658 153 105 8 chr20 2752142 2752266 -69401616 + MER39 LTR ERV1 5 140 -567 1364 193 96 12 chr20 2752284 2752606 -69401276 + MER39 LTR ERV1 357 705 -2 275 176 78 0 chr20 2752664 2752715 -69401167 + L1MC2 LINE L1 351 405 -6021 1608 120 0 4 chr20 2752717 2752958 -69400924 + AluSg/x SINE Alu 66 305 -7 9248 201 90 43 chr20 2752962 2753728 -69400154 + L1MC2 LINE L1 937 1666 -4958 1315 177 135 0 chr20 2753728 2753994 -69399888 - AluJo SINE Alu 0 302 1 9248 201 90 43 chr20 2753994 2754104 -69399778 + L1MC2 LINE L1 1666 1769 -4855 2113 107 27 0 chr20 2754104 2754404 -69399478 + AluSg SINE Alu 1 308 -2 9248 201 90 43 chr20 2754404 2755102 -69398780 + L1MC2 LINE L1 1769 2433 -4191 2163 113 0 0 chr20 2755102 2755411 -69398471 + AluSx SINE Alu 1 309 -3 9248 201 90 43 chr20 2755411 2756176 -69397706 + L1MC2 LINE L1 2433 3161 -3463 289 116 0 0 chr20 2756176 2756219 -69397663 - Alu SINE Alu -11 291 249 9248 201 90 43 chr20 2756219 2756296 -69397586 + L1MC2 LINE L1 3161 3233 -3391 2231 85 3 10 chr20 2756296 2756602 -69397280 + AluSq SINE Alu 1 304 -9 9248 201 90 43 chr20 2756602 2757667 -69396215 + L1MC2 LINE L1 3233 4247 -2377 1807 154 17 0 chr20 2757667 2757965 -69395917 + AluSx SINE Alu 1 303 -9 9248 201 90 43 chr20 2757965 2758209 -69395673 + L1MC2 LINE L1 4247 4478 -2146 1479 182 27 24 chr20 2758209 2758506 -69395376 - AluJo SINE Alu -14 298 1 9248 201 90 43 chr20 2758506 2760106 -69393776 + L1MC2 LINE L1 4478 6556 -68 938 167 0 0 chr20 2760108 2760270 -69393612 - AluJb SINE Alu -4 308 147 2052 117 0 7 chr20 2760283 2760582 -69393300 - AluSx SINE Alu -15 297 1 353 129 71 0 chr20 2760586 2760656 -69393226 + L1MC2 LINE L1 6550 6624 0 1858 113 0 0 chr20 2760766 2761022 -69392860 - AluSx SINE Alu -56 256 1 1246 195 75 10 chr20 2761127 2761419 -69392463 + AluJo SINE Alu 1 311 -1 375 232 66 13 chr20 2761429 2761580 -69392302 + MER110A-int LTR ERV1 1308 1466 -3470 2260 96 3 0 chr20 2761814 2762126 -69391756 - AluSp SINE Alu 0 313 1 446 178 89 32 chr20 2762491 2762648 -69391234 + MER110A-int LTR ERV1 2208 2373 -2563 547 256 63 63 chr20 2762846 2763116 -69390766 + MER110A-int LTR ERV1 2797 3066 -1870 232 271 24 38 chr20 2763255 2763347 -69390535 + MER5A DNA MER1_type 1 102 -87 759 218 68 34 chr20 2763778 2763984 -69389898 + MER110A-int LTR ERV1 2754 2966 -1681 1715 218 95 18 chr20 2764075 2764516 -69389366 + MER110A-int LTR ERV1 3124 3598 -1049 322 242 67 25 chr20 2764516 2764636 -69389246 - L1M4 LINE L1 -2949 3197 3073 816 94 0 35 chr20 2764643 2764813 -69389069 + (TTC)n Simple_repeat Simple_repeat 2 165 0 1534 206 87 30 chr20 2764816 2765209 -69388673 + MER110A-int LTR ERV1 3611 4025 -622 207 114 0 0 chr20 2765229 2765264 -69388618 + (TATG)n Simple_repeat Simple_repeat 2 36 0 850 237 0 0 chr20 2765271 2765427 -69388455 - AluJo/FRAM SINE Alu -25 287 132 1421 160 113 7 chr20 2765430 2765705 -69388177 - AluJo SINE Alu -8 304 1 2530 207 25 30 chr20 2765735 2766267 -69387615 + MER110A-int LTR ERV1 4051 4581 -66 2163 87 3 45 chr20 2766267 2766579 -69387303 + AluSx SINE Alu 1 299 -13 2530 207 25 30 chr20 2766579 2766615 -69387267 + MER110A-int LTR ERV1 4581 4616 -31 980 223 168 59 chr20 2766744 2767166 -69386716 + MER110A LTR ERV1 1 468 0 2187 120 0 0 chr20 2767220 2767528 -69386354 - AluSx SINE Alu -4 308 1 1307 73 23 0 chr20 2767607 2767784 -69386098 + AluSg/x SINE Alu 117 297 -15 633 211 121 115 chr20 2767886 2768425 -69385457 + MER34 LTR ERV1 1 542 0 340 281 143 70 chr20 2768537 2768810 -69385072 + L1ME LINE L1 5335 5656 -465 2095 127 0 6 chr20 2768810 2769124 -69384758 - AluSx SINE Alu 0 312 1 340 281 143 70 chr20 2769124 2769306 -69384576 + L1ME LINE L1 5656 5823 -298 2020 122 14 0 chr20 2769809 2770104 -69383778 - AluSx SINE Alu -13 299 1 2202 101 3 3 chr20 2770194 2770502 -69383380 + AluSg SINE Alu 1 308 -2 209 312 64 16 chr20 2772864 2772989 -69380893 + L2 LINE L2 2956 3086 -186 324 297 102 0 chr20 2773598 2773726 -69380156 - MIR SINE MIR -74 188 48 812 170 0 0 chr20 2774359 2774494 -69379388 + FLAM_C SINE Alu 9 143 0 1219 213 100 68 chr20 2774759 2775185 -69378697 + Charlie4a DNA MER1_type 3 448 -1513 1982 124 24 0 chr20 2775185 2775483 -69378399 + AluSx SINE Alu 1 305 -7 1219 213 100 68 chr20 2775483 2775545 -69378337 + Charlie4a DNA MER1_type 448 507 -1 771 103 0 0 chr20 2776035 2776152 -69377730 - AluY SINE Alu -4 307 191 261 277 60 0 chr20 2776298 2776381 -69377501 - L2 LINE L2 -25 3288 3201 282 353 67 0 chr20 2776696 2776815 -69377067 - MIR SINE MIR -16 246 120 768 270 140 32 chr20 2776990 2777398 -69376484 + LTR16A1 LTR ERVL 2 453 -4 3710 209 32 2 chr20 2777742 2778573 -69375309 - MER45B DNA AcHobo 0 1040 142 327 66 16 33 chr20 2778577 2778638 -69375244 + (TTCTCC)n Simple_repeat Simple_repeat 3 62 0 1101 227 4 34 chr20 2778644 2778772 -69375110 - AluJb SINE Alu -51 261 131 2098 134 3 0 chr20 2778772 2779077 -69374805 - AluSx SINE Alu -6 306 1 2128 118 0 13 chr20 2779081 2779395 -69374487 - AluSx SINE Alu -2 310 1 1101 227 4 34 chr20 2779395 2779530 -69374352 - AluJb SINE Alu -184 128 1 424 212 0 117 chr20 2779532 2779562 -69374320 - MER45B DNA AcHobo -918 122 90 2161 86 20 0 chr20 2779562 2779854 -69374028 + AluSx SINE Alu 1 298 -14 424 212 0 117 chr20 2779854 2779960 -69373922 - MER45B DNA AcHobo -950 90 2 427 275 150 15 chr20 2780001 2780201 -69373681 - MIR SINE MIR -34 228 2 273 379 86 8 chr20 2780216 2780578 -69373304 + L2 LINE L2 2579 2968 -346 317 306 18 18 chr20 2782112 2782223 -69371659 + MIR SINE MIR 88 198 -64 369 295 0 9 chr20 2783055 2783167 -69370715 - HAL1 LINE L1 -1649 858 748 795 259 0 11 chr20 2783168 2783353 -69370529 - MER20 DNA MER1_type 0 219 37 654 309 74 8 chr20 2783405 2783661 -69370221 - HAL1 LINE L1 -1753 754 482 490 149 0 0 chr20 2783748 2783835 -69370047 - L1MB7 LINE L1 -7 6177 6091 3558 122 22 76 chr20 2783928 2784072 -69369810 + MER41B LTR ERV1 1 151 -484 2186 88 27 0 chr20 2784072 2784368 -69369514 + AluSx SINE Alu 9 312 0 3558 122 22 76 chr20 2784368 2784894 -69368988 + MER41B LTR ERV1 151 635 0 523 93 289 0 chr20 2785592 2785689 -69368193 + FLAM_C SINE Alu 4 128 -5 1518 148 38 4 chr20 2786171 2786434 -69367448 - AluJb SINE Alu -29 283 12 611 51 51 0 chr20 2786484 2786563 -69367319 - AluSg/x SINE Alu -11 298 216 459 92 15 0 chr20 2786563 2786628 -69367254 - MER41A LTR ERV1 0 554 489 1095 135 0 0 chr20 2786635 2786805 -69367077 + AluSg/x SINE Alu 134 303 -9 3802 121 28 2 chr20 2787029 2787592 -69366290 - MER41B LTR ERV1 -57 578 1 1408 147 0 9 chr20 2787592 2787816 -69366066 - AluJb SINE Alu -90 222 1 207 0 0 0 chr20 2789861 2789884 -69363998 + (TAAAA)n Simple_repeat Simple_repeat 1 23 0 21 0 0 0 chr20 2789982 2790003 -69363879 + AT_rich Low_complexity Low_complexity 1 21 0 828 148 0 16 chr20 2790003 2790131 -69363751 - FLAM_C SINE Alu -6 127 2 652 153 144 144 chr20 2790821 2791043 -69362839 - MLT2D LTR ERVL 0 414 193 231 345 0 0 chr20 2791084 2791197 -69362685 + (TTAGGG)n Simple_repeat Simple_repeat 6 118 0 1843 126 74 44 chr20 2791342 2791706 -69362176 - THE1C LTR MaLR 0 375 1 1948 146 0 9 chr20 2792166 2792481 -69361401 + AluSx SINE Alu 1 312 0 22 0 0 0 chr20 2792609 2792631 -69361251 + AT_rich Low_complexity Low_complexity 1 22 0 1797 144 0 38 chr20 2792676 2792989 -69360893 + AluJo SINE Alu 1 301 -11 246 167 50 33 chr20 2792993 2793053 -69360829 + MLT2D LTR ERVL 217 277 -137 189 171 0 0 chr20 2793053 2793088 -69360794 + (TA)n Simple_repeat Simple_repeat 2 36 0 342 250 17 108 chr20 2793095 2793215 -69360667 - L1MC4 LINE L1 -1339 6703 6595 323 322 20 0 chr20 2793579 2793728 -69360154 + (CCCTAA)n Simple_repeat Simple_repeat 3 154 0 271 305 23 15 chr20 2794005 2794136 -69359746 + (CCCTAA)n Simple_repeat Simple_repeat 1 132 0 598 184 68 0 chr20 2794152 2794255 -69359627 - FLAM_A SINE Alu -21 121 12 319 351 6 6 chr20 2794354 2794528 -69359354 + (CCCTAA)n Simple_repeat Simple_repeat 1 174 0 1765 145 0 63 chr20 2795389 2795783 -69358099 - AluSx SINE Alu 0 373 1 23 33 0 0 chr20 2795826 2795856 -69358026 + AT_rich Low_complexity Low_complexity 1 30 0 428 130 74 37 chr20 2796241 2796258 -69357624 - L1MB5 LINE L1 -16 6158 6047 437 121 55 0 chr20 2796258 2796349 -69357533 - L1MB4 LINE L1 -39 6141 6046 4012 182 24 35 chr20 2796438 2797373 -69356509 - L1MB5 LINE L1 -109 6065 5138 1821 134 13 59 chr20 2797373 2797679 -69356203 - AluJo SINE Alu -20 292 1 4012 182 24 35 chr20 2797679 2797730 -69356152 - L1MB5 LINE L1 -1036 5138 5088 4903 38 0 0 chr20 2797751 2798622 -69355260 - L1P2 LINE L1 -507 5647 4777 * 7543 28 5 0 chr20 2798620 2799560 -69354322 + L1P2 LINE L1 3840 4784 -1362 584 238 50 19 chr20 2799570 2799730 -69354152 + MER63A DNA MER1_type 46 210 0 1380 62 0 0 chr20 2799827 2800006 -69353876 + (TTC)n Simple_repeat Simple_repeat 2 180 0 525 169 0 23 chr20 2800006 2800136 -69353746 + CT-rich Low_complexity Low_complexity 3 129 0 1695 163 3 68 chr20 2800139 2800334 -69353548 - AluJb SINE Alu -7 305 138 2125 118 14 7 chr20 2800334 2800630 -69353252 + AluSq SINE Alu 1 298 -15 1695 163 3 68 chr20 2800630 2800760 -69353122 - AluJb SINE Alu -174 138 1 21 0 0 0 chr20 2800842 2800863 -69353019 + AT_rich Low_complexity Low_complexity 1 21 0 1142 267 29 22 chr20 2800866 2801252 -69352630 - L1ME3 LINE L1 -1 6161 5773 2384 83 3 0 chr20 2801256 2801558 -69352324 - AluY SINE Alu -8 303 1 824 200 85 0 chr20 2801741 2801906 -69351976 + AluJb SINE Alu 9 187 -125 213 352 7 55 chr20 2801942 2802024 -69351858 + L2 LINE L2 291 365 -2949 1299 195 48 72 chr20 2802024 2802115 -69351767 + MLT1B LTR MaLR 1 93 -297 2514 75 10 0 chr20 2802115 2802423 -69351459 + AluY SINE Alu 1 311 0 1299 195 48 72 chr20 2802423 2802731 -69351151 + MLT1B LTR MaLR 93 390 0 213 352 7 55 chr20 2802731 2802793 -69351089 + L2 LINE L2 365 428 -2886 1760 219 30 10 chr20 2802821 2803227 -69350655 - LTR40c LTR ERVL -13 452 39 9353 241 65 57 chr20 2803275 2805268 -69348614 - HERVL40 LTR ERVL -16 5514 3538 2042 126 61 0 chr20 2805268 2805562 -69348320 - AluSq SINE Alu -1 312 1 9353 241 65 57 chr20 2805562 2805967 -69347915 - HERVL40 LTR ERVL -1992 3538 3138 2440 93 0 10 chr20 2805967 2806278 -69347604 - AluSx SINE Alu -4 308 1 9353 241 65 57 chr20 2806278 2806687 -69347195 - HERVL40 LTR ERVL -2392 3138 2684 1895 114 7 61 chr20 2806693 2807048 -69346834 + AluSx SINE Alu 1 339 0 1535 152 45 38 chr20 2807060 2807350 -69346532 + AluJo SINE Alu 1 292 -20 925 210 58 15 chr20 2807388 2807593 -69346289 + AluJo SINE Alu 54 267 -45 2250 113 7 0 chr20 2807615 2807907 -69345975 - AluSx SINE Alu -18 294 1 2296 104 0 0 chr20 2808039 2808337 -69345545 - AluSg SINE Alu -12 298 1 624 261 68 31 chr20 2808392 2808614 -69345268 - HERVL40 LTR ERVL -3924 1606 1377 411 245 20 10 chr20 2808873 2808975 -69344907 - HERVL40 LTR ERVL -4149 1381 1279 2005 149 26 0 chr20 2808996 2809298 -69344584 + AluJb SINE Alu 1 310 -2 497 263 77 13 chr20 2809398 2809554 -69344328 - HERVL40 LTR ERVL -4448 1082 917 399 220 70 10 chr20 2809728 2809828 -69344054 - HERVL40 LTR ERVL -5424 106 1 1217 198 93 28 chr20 2809849 2810173 -69343709 - LTR40c LTR ERVL -13 452 108 842 120 0 0 chr20 2810201 2810309 -69343573 + AluSq/x SINE Alu 1 108 -204 3977 36 14 2 chr20 2810312 2810815 -69343067 + L1PA5 LINE L1 5646 6154 0 2108 112 49 3 chr20 2811117 2811404 -69342478 - AluSx SINE Alu -12 300 1 497 143 74 175 chr20 2811707 2811896 -69341986 - MER69A DNA AcHobo -7 170 1 572 139 35 26 chr20 2812071 2812186 -69341696 - AluSg/x SINE Alu -12 298 183 240 219 319 8 chr20 2812415 2812534 -69341348 - MIR SINE MIR -60 202 47 2320 91 0 3 chr20 2812558 2812856 -69341026 + AluSx SINE Alu 4 300 -12 364 208 0 0 chr20 2813080 2813152 -69340730 - AluJb SINE Alu -114 188 117 915 121 0 8 chr20 2813171 2813303 -69340579 - AluSq/x SINE Alu -182 131 1 206 244 0 0 chr20 2813344 2813385 -69340497 + (TATATG)n Simple_repeat Simple_repeat 3 43 0 1905 137 13 19 chr20 2814787 2815101 -69338781 + AluJo SINE Alu 1 312 0 244 85 43 0 chr20 2816549 2816596 -69337286 - LTR66 LTR ERVL -171 439 391 537 191 9 0 chr20 2817229 2817334 -69336548 - MER5A DNA MER1_type -80 109 4 248 239 11 67 chr20 2818476 2818656 -69335226 + C-rich Low_complexity Low_complexity 2 171 0 252 0 0 0 chr20 2818662 2818690 -69335192 + (CGG)n Simple_repeat Simple_repeat 3 30 0 206 233 44 25 chr20 2818722 2818881 -69335001 + (CGG)n Simple_repeat Simple_repeat 3 164 0 222 118 0 0 chr20 2818939 2818973 -69334909 + (CCG)n Simple_repeat Simple_repeat 1 34 0 189 0 0 0 chr20 2819031 2819052 -69334830 + (CGGG)n Simple_repeat Simple_repeat 4 24 0 25 0 0 0 chr20 2819075 2819100 -69334782 + GC_rich Low_complexity Low_complexity 1 25 0 280 216 45 23 chr20 2820822 2820910 -69332972 - L1ME4a LINE L1 -67 6054 5965 2117 141 0 0 chr20 2822047 2822369 -69331513 + AluSx SINE Alu 1 322 0 2792 33 0 0 chr20 2823121 2823427 -69330455 + AluY SINE Alu 1 306 -5 1587 214 78 13 chr20 2825813 2826200 -69327682 + LTR16C LTR ERVL 80 491 0 2101 128 21 0 chr20 2828009 2828299 -69325583 + AluJo SINE Alu 1 296 -16 1737 161 70 3 chr20 2828851 2829137 -69324745 + AluJb SINE Alu 1 305 -7 1163 142 0 0 chr20 2829146 2829301 -69324581 + FRAM SINE Alu 1 154 -22 876 190 9 3 chr20 2829309 2829531 -69324351 + AluJb SINE Alu 1 293 -19 2556 196 22 12 chr20 2829591 2830096 -69323786 - MLT1F LTR MaLR -32 510 1 477 0 0 0 chr20 2831643 2831696 -69322186 + (CA)n Simple_repeat Simple_repeat 1 53 0 543 259 86 81 chr20 2832333 2832730 -69321152 - LTR16A1 LTR ERVL -3 488 1 992 146 0 19 chr20 2834448 2834606 -69319276 + FRAM SINE Alu 18 172 -4 380 281 89 0 chr20 2834614 2834760 -69319122 + L1ME3A LINE L1 5945 6103 -67 2206 130 0 3 chr20 2834761 2835060 -69318822 + AluSx SINE Alu 1 298 -14 209 170 0 43 chr20 2835382 2835429 -69318453 + CT-rich Low_complexity Low_complexity 2 46 0 244 220 0 17 chr20 2835733 2835792 -69318090 + GA-rich Low_complexity Low_complexity 3 60 0 1798 178 0 4 chr20 2836032 2836307 -69317575 - AluJb SINE Alu -38 274 1 1173 258 79 65 chr20 2836477 2836717 -69317165 - L1MC4a LINE L1 -1633 6175 5940 1943 150 0 21 chr20 2836717 2837038 -69316844 + AluJb SINE Alu 1 315 0 1173 258 79 65 chr20 2837038 2837475 -69316407 - L1MC4a LINE L1 -1868 5940 5485 5803 253 131 25 chr20 2837477 2839960 -69313922 - L2 LINE L2 -1 3312 566 455 240 73 27 chr20 2839980 2840130 -69313752 - L1MC4a LINE L1 -2337 5471 5315 384 152 0 0 chr20 2840134 2840200 -69313682 + CT-rich Low_complexity Low_complexity 2 67 0 2063 141 10 0 chr20 2840200 2840505 -69313377 - AluJo SINE Alu 0 312 5 22 56 0 0 chr20 2840846 2840882 -69313000 + AT_rich Low_complexity Low_complexity 1 36 0 1030 276 158 14 chr20 2841089 2841600 -69312282 - L1ME2 LINE L1 -209 6024 5440 2222 106 0 0 chr20 2841600 2841906 -69311976 - AluSx SINE Alu 0 306 1 976 191 12 6 chr20 2841925 2842098 -69311784 + AluJb SINE Alu 129 302 -10 2495 70 0 7 chr20 2842103 2842404 -69311478 + AluSp SINE Alu 2 300 -13 4010 270 67 59 chr20 2842420 2843668 -69310214 - L1ME2 LINE L1 -1074 5141 3904 2499 87 0 0 chr20 2843668 2843966 -69309916 - AluSg SINE Alu -12 298 1 4010 270 67 59 chr20 2843966 2844943 -69308939 - L1ME2 LINE L1 -2311 3904 2889 1978 169 0 0 chr20 2844943 2845117 -69308765 - AluJb SINE Alu -5 307 131 2284 112 6 10 chr20 2845117 2845430 -69308452 - AluSx SINE Alu 0 312 1 1978 169 0 0 chr20 2845430 2845562 -69308320 - AluJb SINE Alu -180 132 1 4010 270 67 59 chr20 2845562 2845983 -69307899 - L1ME2 LINE L1 -3326 2889 2473 1802 83 9 4 chr20 2846024 2846253 -69307629 - AluSq SINE Alu -83 230 1 2752 257 132 17 chr20 2846259 2847318 -69306564 - L1ME2 LINE L1 -4205 2191 939 2388 95 0 0 chr20 2847318 2847612 -69306270 - AluSx SINE Alu -18 294 1 2752 257 132 17 chr20 2847612 2847914 -69305968 - L1ME2 LINE L1 -5457 939 673 716 178 0 15 chr20 2847915 2848050 -69305832 - FLAM_A SINE Alu -2 140 8 2139 269 52 16 chr20 2848055 2848629 -69305253 - L1ME2 LINE L1 -5709 687 87 189 0 0 0 chr20 2848629 2848650 -69305232 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 2139 269 52 16 chr20 2848650 2848703 -69305179 - L1ME2 LINE L1 -6309 87 37 254 233 14 0 chr20 2848697 2848770 -69305112 - L1MEd LINE L1 -3267 2862 2789 * 430 285 88 45 chr20 2848778 2849196 -69304686 - L1MEd LINE L1 -3475 2654 2209 2723 35 3 0 chr20 2849196 2849506 -69304376 - AluY SINE Alu 0 311 1 430 285 88 45 chr20 2849506 2849600 -69304282 - L1MEd LINE L1 -3920 2209 2120 227 194 42 0 chr20 2849602 2849674 -69304208 - L1MA9 LINE L1 0 6312 6238 373 288 42 102 chr20 2849680 2849916 -69303966 - L1MEd LINE L1 -4170 2140 1919 781 240 43 34 chr20 2849924 2850132 -69303750 - MER63A DNA MER1_type 0 210 1 24 32 0 0 chr20 2850191 2850222 -69303660 + AT_rich Low_complexity Low_complexity 1 31 0 1100 277 64 48 chr20 2850278 2850481 -69303401 - L1MEd LINE L1 -4652 1658 1460 1917 172 3 0 chr20 2850481 2850778 -69303104 + AluJo SINE Alu 2 299 -13 1100 277 64 48 chr20 2850778 2851608 -69302274 - L1MEd LINE L1 -4850 1460 557 343 358 33 33 chr20 2851877 2852092 -69301790 - L1M4 LINE L1 -1146 5000 4786 387 136 0 0 chr20 2852112 2852171 -69301711 + AluJ/FLAM SINE Alu 1 59 -243 1371 217 4 14 chr20 2852176 2852453 -69301429 + AluJo SINE Alu 24 297 -15 4131 146 50 80 chr20 2852627 2853195 -69300687 - L1MB2 LINE L1 0 6171 5645 1084 187 20 49 chr20 2853195 2853441 -69300441 + MER8 DNA MER2_type 1 239 0 4131 146 50 80 chr20 2853441 2853899 -69299983 - L1MB2 LINE L1 -526 5645 5175 1288 200 118 52 chr20 2854601 2855066 -69298816 + Charlie4a DNA MER1_type 13 508 0 424 232 216 48 chr20 2855666 2855916 -69297966 - LTR16A1 LTR ERVL -16 441 150 1244 234 106 14 chr20 2855982 2856405 -69297477 - MLT1C LTR MaLR 0 467 6 2337 110 0 0 chr20 2856753 2857054 -69296828 - AluSc SINE Alu -8 301 1 321 228 179 14 chr20 2857076 2857221 -69296661 - MLT1J2 LTR MaLR 0 450 282 385 254 29 29 chr20 2857361 2857499 -69296383 - MLT1J LTR MaLR -369 142 5 1530 195 48 65 chr20 2857840 2857959 -69295923 - L1M4 LINE L1 -3565 3079 2959 1745 167 0 63 chr20 2857959 2858277 -69295605 - AluJb SINE Alu -12 300 3 1530 195 48 65 chr20 2858277 2858690 -69295192 - L1M4 LINE L1 -3685 2959 2596 261 182 18 18 chr20 2858688 2858743 -69295139 - L1MC1 LINE L1 -49 6284 6230 * 6419 211 29 53 chr20 2858733 2859575 -69294307 - L1M4 LINE L1 -4478 2168 1308 1266 108 80 0 chr20 2859575 2859788 -69294094 + MER30 DNA MER1_type 1 230 0 6419 211 29 53 chr20 2859788 2859984 -69293898 - L1M4 LINE L1 -5338 1308 1109 1973 152 3 3 chr20 2859984 2860274 -69293608 + AluJb SINE Alu 2 291 -21 6419 211 29 53 chr20 2860274 2861433 -69292449 - L1M4 LINE L1 -5537 1109 16 180 254 16 32 chr20 2861489 2861552 -69292330 - L3 LINE CR1 -780 797 736 261 318 47 0 chr20 2861561 2861668 -69292214 - L2 LINE L2 -27 3245 3134 731 202 101 5 chr20 2861793 2861981 -69291901 + MER3 DNA MER1_type 4 209 0 2677 45 0 6 chr20 2862825 2863136 -69290746 + AluY SINE Alu 1 309 -2 275 279 42 85 chr20 2863297 2863462 -69290420 + MIR SINE MIR 77 234 -28 2176 103 24 3 chr20 2863546 2863838 -69290044 + AluSx SINE Alu 1 298 -14 207 255 20 0 chr20 2865416 2865467 -69288415 + L2 LINE L2 3262 3313 0 754 160 0 89 chr20 2865824 2865888 -69287994 - MER3 DNA MER1_type 0 209 141 2359 92 0 0 chr20 2865888 2866180 -69287702 + AluSx SINE Alu 1 292 -20 754 160 0 89 chr20 2866180 2866284 -69287598 - MER3 DNA MER1_type -68 141 56 973 170 251 12 chr20 2866498 2866821 -69287061 - LTR16A1 LTR ERVL -2 455 56 1956 150 3 7 chr20 2866886 2867179 -69286703 + AluJb SINE Alu 1 292 -20 214 294 78 20 chr20 2868030 2868132 -69285750 + MIR SINE MIR 45 152 -56 195 250 0 0 chr20 2869006 2869050 -69284832 + L2 LINE L2 3044 3087 -185 606 212 16 171 chr20 2869288 2869609 -69284273 - LTR37B LTR ERV1 0 468 198 286 227 147 0 chr20 2869669 2869744 -69284138 - L1MA4A LINE L1 -28 6275 6190 657 167 39 78 chr20 2869749 2869925 -69283957 - L1MA4A LINE L1 -181 6122 5954 1549 74 0 0 chr20 2869925 2870114 -69283768 - AluSq SINE Alu 0 313 125 657 167 39 78 chr20 2870114 2870141 -69283741 - L1MA4A LINE L1 -349 5954 5927 242 133 173 40 chr20 2870171 2870246 -69283636 - LTR37B LTR ERV1 -270 198 114 2082 164 0 0 chr20 2870337 2870649 -69283233 - AluSx SINE Alu 0 312 1 1391 158 75 7 chr20 2870650 2870929 -69282953 - MER33 DNA MER1_type -26 298 1 625 207 124 0 chr20 2870937 2871082 -69282800 - MER5A DNA MER1_type 0 189 27 1785 111 51 63 chr20 2872868 2873184 -69280698 + AluSx SINE Alu 1 312 0 24 32 0 0 chr20 2875383 2875414 -69278468 + GC_rich Low_complexity Low_complexity 1 31 0 180 111 0 0 chr20 2876880 2876907 -69276975 + (GGAGAA)n Simple_repeat Simple_repeat 6 32 0 188 194 129 32 chr20 2877298 2877360 -69276522 + L2 LINE L2 3245 3312 -1 180 0 0 0 chr20 2877655 2877675 -69276207 + (CGGGG)n Simple_repeat Simple_repeat 5 24 0 27 81 0 0 chr20 2877867 2877929 -69275953 + GC_rich Low_complexity Low_complexity 1 62 0 24 103 0 0 chr20 2878103 2878190 -69275692 + GC_rich Low_complexity Low_complexity 1 87 0 185 314 0 0 chr20 2879315 2879366 -69274516 - L2 LINE L2 -8 3264 3214 186 195 13 143 chr20 2882104 2882181 -69271701 - MIR3 SINE MIR -28 180 114 184 266 0 78 chr20 2882461 2882525 -69271357 + L2 LINE L2 3255 3313 0 279 256 156 0 chr20 2882697 2882787 -69271095 + MER103 DNA DNA 61 164 -2 983 204 107 89 chr20 2883498 2883522 -69270360 - LTR37B LTR ERV1 -15 453 431 1863 151 0 31 chr20 2883522 2883838 -69270044 + AluJb SINE Alu 1 307 0 983 204 107 89 chr20 2883838 2884251 -69269631 - LTR37B LTR ERV1 -37 431 6 1506 212 35 32 chr20 2887196 2887569 -69266313 + MLT1A2 LTR MaLR 1 374 0 1494 263 26 35 chr20 2888335 2888799 -69265083 - LTR16C LTR ERVL 0 491 32 628 112 10 10 chr20 2889425 2889523 -69264359 + FLAM_A SINE Alu 31 128 -14 526 240 16 0 chr20 2889523 2889648 -69264234 + L1M4 LINE L1 4912 5038 -1108 270 0 0 0 chr20 2890158 2890188 -69263694 + (TG)n Simple_repeat Simple_repeat 2 31 0 1575 122 110 28 chr20 2890188 2890442 -69263440 - AluJo SINE Alu -34 278 4 2111 131 10 13 chr20 2890468 2890781 -69263101 - AluJb SINE Alu 0 312 1 2080 107 28 31 chr20 2890934 2891223 -69262659 + AluSx SINE Alu 2 289 -23 28 29 0 0 chr20 2891230 2891265 -69262617 + AT_rich Low_complexity Low_complexity 1 35 0 1116 254 43 15 chr20 2891265 2891659 -69262223 - L1M4 LINE L1 -1056 5090 4686 875 175 0 0 chr20 2891659 2891802 -69262080 - FLAM_C SINE Alu 0 143 1 2007 242 104 19 chr20 2891804 2891901 -69261981 - L1M4 LINE L1 -1433 4713 4626 1727 134 4 4 chr20 2891901 2892154 -69261728 + AluSx SINE Alu 51 303 -9 2007 242 104 19 chr20 2892154 2892875 -69261007 - L1M4 LINE L1 -1520 4626 3826 1863 120 4 0 chr20 2892936 2893186 -69260696 - AluSx SINE Alu -61 251 1 2047 137 10 3 chr20 2894809 2895102 -69258780 - AluJo SINE Alu -17 295 1 973 252 114 26 chr20 2895139 2895559 -69258323 - LTR16A1 LTR ERVL 0 457 1 2229 88 0 7 chr20 2896095 2896425 -69257457 + AluSx SINE Alu 1 328 0 2658 219 91 87 chr20 2896736 2896823 -69257059 + L1MD2 LINE L1 5 90 -6450 1680 140 63 14 chr20 2896823 2897109 -69256773 + AluJo SINE Alu 11 310 -2 2658 219 91 87 chr20 2897109 2898028 -69255854 + L1MD2 LINE L1 90 1015 -5525 1122 129 0 35 chr20 2898041 2898211 -69255671 - FRAM SINE Alu -15 161 1 1902 200 45 42 chr20 2898211 2898272 -69255610 + L1MD2 LINE L1 1000 1059 -5481 2503 70 3 0 chr20 2898272 2898571 -69255311 + AluSp SINE Alu 1 300 -13 1902 200 45 42 chr20 2898571 2899061 -69254821 + L1MD2 LINE L1 1059 1556 -4984 1990 181 3 0 chr20 2899061 2899370 -69254512 + AluJb SINE Alu 1 310 -2 1902 200 45 42 chr20 2899370 2899411 -69254471 + L1MD2 LINE L1 1556 1595 -4945 2377 95 7 0 chr20 2899481 2899786 -69254096 - AluSc SINE Alu -2 307 1 1956 164 7 0 chr20 2899790 2900089 -69253793 - AluJo SINE Alu -11 301 1 1734 129 126 0 chr20 2900323 2900609 -69253273 - AluSx SINE Alu 0 318 1 241 220 40 0 chr20 2900740 2900790 -69253092 - MER91 DNA MER1_type -12 178 127 1703 309 40 6 chr20 2900870 2901375 -69252507 - HERV16 LTR ERVL -1925 3071 2550 1628 230 25 77 chr20 2901387 2901872 -69252010 + L1MD2 LINE L1 4250 4759 -1781 1775 167 10 10 chr20 2901872 2902172 -69251710 + AluJo SINE Alu 1 300 -12 1628 230 25 77 chr20 2902172 2902292 -69251590 + L1MD2 LINE L1 4759 4884 -1656 1775 171 42 36 chr20 2902292 2902512 -69251370 - MLT1B LTR MaLR 0 390 166 2223 109 7 0 chr20 2902512 2902806 -69251076 - AluSx SINE Alu -11 301 6 1775 171 42 36 chr20 2902806 2902971 -69250911 - MLT1B LTR MaLR -224 166 3 1628 230 25 77 chr20 2902971 2903140 -69250742 + L1MD2 LINE L1 4884 4928 -1612 2176 109 7 0 chr20 2903140 2903455 -69250427 - AluSg SINE Alu 0 317 1 1628 230 25 77 chr20 2903455 2903640 -69250242 + L1MD2 LINE L1 4928 5121 -1419 2366 109 0 0 chr20 2903679 2903981 -69249901 - AluSx SINE Alu -10 302 1 4683 159 28 57 chr20 2903991 2904036 -69249846 - L1MB4 LINE L1 -2 6178 6133 701 200 0 15 chr20 2904036 2904171 -69249711 - FLAM_A SINE Alu 0 133 1 4683 159 28 57 chr20 2904171 2904811 -69249071 - L1MB4 LINE L1 -47 6133 5476 2119 140 7 0 chr20 2904811 2905119 -69248763 - AluSx SINE Alu -2 310 1 4683 159 28 57 chr20 2905119 2905298 -69248584 - L1MB4 LINE L1 -704 5476 5293 2432 35 35 7 chr20 2905298 2905585 -69248297 + AluY SINE Alu 1 295 -16 4683 159 28 57 chr20 2905585 2905985 -69247897 - L1MB4 LINE L1 -887 5293 4924 1860 212 32 4 chr20 2905971 2906438 -69247444 + L1MD2 LINE L1 5113 5592 -948 * 3651 188 61 42 chr20 2907095 2908089 -69245793 + L1MD2 LINE L1 5583 6545 -208 237 292 0 0 chr20 2908138 2908203 -69245679 + L1MD3 LINE L1 7798 7862 -133 1214 129 40 49 chr20 2908206 2908280 -69245602 - MLT1B LTR MaLR 0 390 317 2205 125 0 0 chr20 2908280 2908575 -69245307 + AluSx SINE Alu 2 296 -16 1214 129 40 49 chr20 2908575 2908725 -69245157 - MLT1B LTR MaLR -73 317 168 707 185 37 0 chr20 2908726 2908861 -69245021 - FLAM_C SINE Alu -2 141 2 852 148 56 0 chr20 2908861 2909023 -69244859 - MLT1B LTR MaLR -216 174 4 411 207 86 9 chr20 2909024 2909140 -69244742 + L1MD2 LINE L1 6616 6740 -13 2177 121 14 3 chr20 2909140 2909437 -69244445 + AluSx SINE Alu 1 300 -12 2528 70 3 0 chr20 2909439 2909739 -69244143 + AluSp SINE Alu 3 303 -10 2433 210 85 2 chr20 2909740 2910330 -69243552 + L1ME1 LINE L1 5312 5950 -216 869 233 65 71 chr20 2910325 2910451 -69243431 - L1M4c LINE L1 -3921 2463 2338 * 2272 125 0 0 chr20 2910451 2910762 -69243120 - AluJb SINE Alu -1 311 1 869 233 65 71 chr20 2910762 2910823 -69243059 - L1M4c LINE L1 -4046 2338 2278 2413 68 0 0 chr20 2910823 2911143 -69242739 - AluSc SINE Alu 0 320 1 869 233 65 71 chr20 2911143 2911519 -69242363 - L1M4c LINE L1 -4106 2278 2025 486 151 41 27 chr20 2911530 2911676 -69242206 - L1MB8 LINE L1 0 6178 6031 601 226 0 0 chr20 2911686 2911801 -69242081 + AluJo SINE Alu 1 115 -187 931 129 57 0 chr20 2911801 2911941 -69241941 + AluJo SINE Alu 162 309 -3 922 175 5 47 chr20 2911949 2912160 -69241722 - L1MB5 LINE L1 -154 6020 5819 2203 133 0 16 chr20 2912161 2912477 -69241405 - AluSx SINE Alu -1 311 1 1164 197 21 45 chr20 2912477 2912766 -69241116 - L1M4c LINE L1 -4728 1656 1375 571 209 67 52 chr20 2912766 2912870 -69241012 + L1ME1 LINE L1 5936 6037 -129 2416 78 0 0 chr20 2912870 2913166 -69240716 - AluY SINE Alu -15 296 1 571 209 67 52 chr20 2913166 2913271 -69240611 + L1ME1 LINE L1 6037 6148 -18 1976 91 65 18 chr20 2913301 2913577 -69240305 - AluSc SINE Alu -20 289 1 1902 133 16 42 chr20 2913632 2913940 -69239942 - AluSp SINE Alu -12 301 2 574 262 47 92 chr20 2913956 2914111 -69239771 - L1ME3A LINE L1 -80 6090 5930 1783 182 0 19 chr20 2914111 2914429 -69239453 - AluJo SINE Alu 0 312 1 574 262 47 92 chr20 2914429 2914615 -69239267 - L1ME3A LINE L1 -240 5930 5773 1843 173 7 10 chr20 2914615 2914922 -69238960 - AluJb SINE Alu -6 306 1 574 262 47 92 chr20 2914922 2915048 -69238834 - L1ME3A LINE L1 -397 5773 5643 246 211 32 32 chr20 2915476 2915571 -69238311 - L1ME3A LINE L1 -914 5386 5292 * 519 279 50 84 chr20 2915560 2915659 -69238223 - L1MEd LINE L1 -4862 1257 1156 2024 157 0 13 chr20 2915659 2915964 -69237918 + AluJb SINE Alu 1 301 -11 519 279 50 84 chr20 2915964 2915979 -69237903 - L1MEd LINE L1 -4963 1156 1142 1888 137 42 0 chr20 2915979 2916264 -69237618 + AluJo SINE Alu 9 305 -7 519 279 50 84 chr20 2916264 2916516 -69237366 - L1MEd LINE L1 -4977 1142 883 183 114 0 0 chr20 2916516 2916551 -69237331 + (TA)n Simple_repeat Simple_repeat 1 35 0 1884 107 95 4 chr20 2916551 2916814 -69237068 - AluSx SINE Alu -25 287 1 519 279 50 84 chr20 2916814 2916979 -69236903 - L1MEd LINE L1 -5234 885 741 1997 102 65 0 chr20 2917217 2917492 -69236390 + AluSx SINE Alu 1 293 -19 180 0 0 0 chr20 2917492 2917512 -69236370 + (GGAA)n Simple_repeat Simple_repeat 3 22 0 476 232 21 49 chr20 2917920 2918062 -69235820 + LTR67 LTR ERVL 410 547 -10 769 244 34 21 chr20 2918141 2918375 -69235507 + L1ME3A LINE L1 5934 6170 0 313 291 30 61 chr20 2918574 2918739 -69235143 + LTR33A LTR ERVL 1 160 -363 1421 135 54 58 chr20 2918932 2919192 -69234690 - AluJb SINE Alu -53 259 1 365 235 20 10 chr20 2919197 2919299 -69234583 + LTR33A LTR ERVL 421 523 0 221 321 55 41 chr20 2925053 2925271 -69228611 + L2 LINE L2 2909 3129 -143 439 257 0 11 chr20 2925930 2926109 -69227773 + (TG)n Simple_repeat Simple_repeat 1 177 0 224 265 0 15 chr20 2926110 2926178 -69227704 + (CGTG)n Simple_repeat Simple_repeat 1 67 0 2364 157 105 0 chr20 2926733 2927192 -69226690 + MER84 LTR ERV1 1 507 0 2445 110 44 10 chr20 2927192 2927582 -69226300 + MER84-int LTR ERV1 1 403 -4551 906 141 17 57 chr20 2927554 2927731 -69226151 + MER84-int LTR ERV1 598 767 -4187 * 557 153 207 0 chr20 2927732 2927843 -69226039 + AluSp SINE Alu 2 135 -178 2063 107 0 61 chr20 2927843 2928171 -69225711 + AluSx SINE Alu 1 308 -4 6033 116 15 31 chr20 2928177 2929075 -69224807 + MER84-int LTR ERV1 755 1638 -3316 2101 106 29 0 chr20 2929075 2929376 -69224506 + AluSp SINE Alu 1 309 0 6033 116 15 31 chr20 2929376 2929467 -69224415 + MER84-int LTR ERV1 1638 1729 -3225 1099 138 6 29 chr20 2929470 2929644 -69224238 + AluSx SINE Alu 1 170 -142 2430 79 50 6 chr20 2929647 2929989 -69223893 + MER84-int LTR ERV1 4598 4954 0 2221 139 153 14 chr20 2929989 2930434 -69223448 + MER84 LTR ERV1 1 507 0 247 261 15 0 chr20 2930536 2930601 -69223281 - MIR SINE MIR -62 146 81 210 178 0 22 chr20 2930845 2930890 -69222992 + CT-rich Low_complexity Low_complexity 5 48 0 422 293 137 32 chr20 2931991 2932428 -69221454 + L2 LINE L2 2827 3309 -4 2427 88 3 0 chr20 2932605 2932911 -69220971 - AluY SINE Alu -4 307 1 448 262 54 30 chr20 2933371 2933539 -69220343 + MIR SINE MIR 29 200 -62 385 173 83 149 chr20 2933909 2933979 -69219903 + MER5A DNA MER1_type 4 77 -112 2199 91 9 61 chr20 2933979 2934308 -69219574 + AluSx SINE Alu 1 312 0 385 173 83 149 chr20 2934308 2934368 -69219514 + MER5A DNA MER1_type 77 123 -66 1792 95 13 0 chr20 2934368 2934600 -69219282 - AluSg/x SINE Alu -9 301 67 385 173 83 149 chr20 2934600 2934636 -69219246 + MER5A DNA MER1_type 123 160 -29 1020 171 40 72 chr20 2934865 2934910 -69218972 - AluJo SINE Alu -11 301 256 4467 54 3 17 chr20 2934910 2935245 -69218637 - LTR14C LTR ERVK 0 587 262 2508 59 0 7 chr20 2935245 2935551 -69218331 + AluY SINE Alu 1 304 -7 4467 54 3 17 chr20 2935551 2935810 -69218072 - LTR14C LTR ERVK -325 262 1 1020 171 40 72 chr20 2935810 2935937 -69217945 - AluJo SINE Alu -56 256 135 2426 84 3 7 chr20 2935937 2936246 -69217636 - AluSc SINE Alu -1 308 1 1020 171 40 72 chr20 2936246 2936294 -69217588 - AluJo SINE Alu -177 135 87 3529 120 22 25 chr20 2936309 2936535 -69217347 - L1PB3 LINE L1 -2 6152 5927 2439 74 7 7 chr20 2936535 2936845 -69217037 - AluY SINE Alu -1 310 1 3529 120 22 25 chr20 2936845 2936978 -69216904 - L1PB3 LINE L1 -227 5927 5795 369 0 0 0 chr20 2936978 2937019 -69216863 + (TG)n Simple_repeat Simple_repeat 1 41 0 3529 120 22 25 chr20 2937019 2937251 -69216631 - L1PB3 LINE L1 -359 5795 5562 2148 253 125 38 chr20 2937310 2937414 -69216468 - HAL1 LINE L1 -100 2407 2313 1960 155 16 7 chr20 2937414 2937718 -69216164 - AluSq SINE Alu 0 313 7 2148 253 125 38 chr20 2937718 2938661 -69215221 - HAL1 LINE L1 -194 2313 1269 2557 89 0 0 chr20 2938662 2938975 -69214907 + AluSq SINE Alu 1 313 0 404 183 0 0 chr20 2938980 2939051 -69214831 + LTR16A1 LTR ERVL 372 442 -15 1917 132 146 13 chr20 2939062 2939440 -69214442 + MSTA LTR MaLR 1 428 0 291 203 0 58 chr20 2939440 2939509 -69214373 + L2 LINE L2 3207 3271 -1 196 308 208 8 chr20 2943568 2943698 -69210184 + MIR SINE MIR 57 212 -50 310 330 0 9 chr20 2944551 2944657 -69209225 + MIR SINE MIR 48 152 -110 542 253 108 0 chr20 2945332 2945434 -69208448 + MER5A DNA MER1_type 9 135 -54 2339 104 7 0 chr20 2945434 2945733 -69208149 - AluSx SINE Alu -11 301 1 542 253 108 0 chr20 2945733 2945788 -69208094 + MER5A DNA MER1_type 135 183 -6 1250 43 10 34 chr20 2948287 2948494 -69205388 + SVA Other Other 665 866 -520 6637 79 13 47 chr20 2948518 2949717 -69204165 + SVA Other Other 431 1386 0 646 289 36 27 chr20 2949942 2950243 -69203639 - L1M4 LINE L1 -1993 4153 3850 * 936 234 98 8 chr20 2950212 2950273 -69203609 - L1MC2 LINE L1 -344 5818 5764 1833 160 0 45 chr20 2950273 2950585 -69203297 - AluSx SINE Alu -14 298 1 936 234 98 8 chr20 2950585 2950849 -69203033 - L1MC2 LINE L1 -398 5764 5547 5883 217 38 33 chr20 2951031 2951955 -69201927 + L1PA8 LINE L1 3811 4729 -1443 2387 92 0 16 chr20 2951955 2952259 -69201623 + AluSq SINE Alu 1 299 -14 5883 217 38 33 chr20 2952259 2953703 -69200179 + L1PA8 LINE L1 4729 6172 0 354 274 102 80 chr20 2953691 2953965 -69199917 + L1ME1 LINE L1 5885 6164 -2 * 1555 183 3 74 chr20 2953967 2954290 -69199592 - AluJo SINE Alu -12 300 1 2249 80 3 14 chr20 2954296 2954612 -69199270 - AluY SINE Alu 0 313 1 2200 119 0 0 chr20 2954788 2955107 -69198775 - AluSq SINE Alu 0 319 1 1303 126 0 88 chr20 2955110 2955349 -69198533 - AluSg/x SINE Alu -10 302 85 749 179 14 7 chr20 2955351 2955468 -69198414 - AluSg/x SINE Alu -59 253 133 1997 120 62 3 chr20 2955468 2955760 -69198122 - AluSq SINE Alu -4 309 1 749 179 14 7 chr20 2955760 2955782 -69198100 - AluSg/x SINE Alu -179 133 113 2524 69 3 3 chr20 2956275 2956580 -69197302 - AluY SINE Alu -6 305 1 1626 173 14 21 chr20 2956768 2957052 -69196830 + AluJb SINE Alu 1 282 -30 359 281 37 55 chr20 2957082 2957246 -69196636 + L1MCa LINE L1 1938 2098 -4328 652 222 0 28 chr20 2957627 2957771 -69196111 + FLAM_C SINE Alu 2 141 -2 1971 108 79 0 chr20 2958550 2958827 -69195055 + AluSc SINE Alu 1 299 -10 219 235 39 0 chr20 2958868 2958919 -69194963 - L2 LINE L2 -5 3267 3215 210 364 10 10 chr20 2960090 2960189 -69193693 + G-rich Low_complexity Low_complexity 3 101 0 198 183 83 83 chr20 2961327 2961387 -69192495 - L2 LINE L2 -7 3306 3247 181 362 121 17 chr20 2965285 2965459 -69188423 + L2 LINE L2 2693 2884 -430 2047 120 21 3 chr20 2965722 2966013 -69187869 - AluSx SINE Alu -16 296 1 795 196 18 0 chr20 2966114 2966282 -69187600 + FAM SINE Alu 1 171 -4 2031 125 33 0 chr20 2966292 2966564 -69187318 + AluSx SINE Alu 1 281 -31 345 326 0 0 chr20 2966580 2966669 -69187213 + L1MC4 LINE L1 6614 6702 -1340 314 346 0 9 chr20 2966603 2966710 -69187172 - L1MC4 LINE L1 -1323 6719 6614 * 294 231 0 0 chr20 2966720 2966863 -69187019 + (TAGA)n Simple_repeat Simple_repeat 4 146 0 2447 102 0 0 chr20 2967110 2967415 -69186467 + AluSg SINE Alu 1 305 -5 764 222 111 34 chr20 2967862 2968069 -69185813 - MIR SINE MIR -8 254 32 492 335 119 36 chr20 2968640 2968966 -69184916 - L2 LINE L2 -216 3056 2759 324 0 0 0 chr20 2968966 2969002 -69184880 + (TG)n Simple_repeat Simple_repeat 2 37 0 492 335 119 36 chr20 2969002 2969352 -69184530 - L2 LINE L2 -513 2759 2315 321 217 0 0 chr20 2969489 2969556 -69184326 + FRAM/FAM SINE Alu 1 49 -117 3323 136 45 41 chr20 2969569 2970071 -69183811 - L1MB2 LINE L1 -7 6164 5657 2541 82 0 0 chr20 2970071 2970375 -69183507 - AluSx SINE Alu -8 304 1 3323 136 45 41 chr20 2970375 2970512 -69183370 - L1MB2 LINE L1 -514 5657 5522 229 367 64 56 chr20 2971302 2971440 -69182442 + L2 LINE L2 719 854 -2460 2411 95 0 0 chr20 2971440 2971735 -69182147 - AluSc SINE Alu -14 295 1 229 367 64 56 chr20 2971735 2972171 -69181711 + L2 LINE L2 854 1298 -2016 960 190 0 46 chr20 2972189 2972384 -69181498 - AluJb SINE Alu -1 311 126 1715 290 78 6 chr20 2972389 2972927 -69180955 - ERVL LTR ERVL -926 4838 4262 557 342 56 8 chr20 2972989 2973255 -69180627 - ERVL LTR ERVL -5042 722 444 2235 120 7 0 chr20 2973256 2973555 -69180327 - AluSp SINE Alu -10 303 3 257 226 215 57 chr20 2973938 2973998 -69179884 - LTR41 LTR ERVL 0 795 746 2172 117 0 7 chr20 2973998 2974305 -69179577 + AluSq SINE Alu 1 305 -8 2291 124 3 0 chr20 2974305 2974612 -69179270 + AluSc SINE Alu 1 308 -1 257 226 215 57 chr20 2974612 2974644 -69179238 - LTR41 LTR ERVL -49 746 720 1832 156 23 16 chr20 2974644 2974951 -69178931 + AluJb SINE Alu 1 309 -3 257 226 215 57 chr20 2974951 2975100 -69178782 - LTR41 LTR ERVL -75 720 510 1044 94 0 0 chr20 2975285 2975413 -69178469 + AluSp SINE Alu 1 128 -185 1806 88 4 0 chr20 2975414 2975640 -69178242 + AluSq SINE Alu 76 302 -11 2322 76 3 7 chr20 2975646 2975934 -69177948 + AluY SINE Alu 1 287 -24 745 177 37 18 chr20 2976216 2976380 -69177502 - LTR41 LTR ERVL -604 169 3 13676 110 40 41 chr20 2976500 2977067 -69176815 - Tigger1 DNA MER2_type 0 2418 1852 2229 129 7 0 chr20 2977067 2977377 -69176505 + AluSx SINE Alu 1 312 0 13676 110 40 41 chr20 2977377 2977623 -69176259 - Tigger1 DNA MER2_type -566 1852 1607 2427 104 0 0 chr20 2977623 2977931 -69175951 - AluSx SINE Alu -4 308 1 13676 110 40 41 chr20 2977931 2978085 -69175797 - Tigger1 DNA MER2_type -811 1607 1454 1356 189 47 47 chr20 2978085 2978197 -69175685 + AluJo SINE Alu 1 112 -200 243 0 0 0 chr20 2978197 2978224 -69175658 + (CA)n Simple_repeat Simple_repeat 2 28 0 1356 189 47 47 chr20 2978224 2978440 -69175442 + AluJo SINE Alu 111 312 0 13676 110 40 41 chr20 2978440 2978470 -69175412 - Tigger1 DNA MER2_type -964 1454 1425 2401 112 0 6 chr20 2978470 2978784 -69175098 + AluSx SINE Alu 1 312 0 13676 110 40 41 chr20 2978784 2978919 -69174963 - Tigger1 DNA MER2_type -993 1425 1291 2356 98 3 0 chr20 2978919 2979216 -69174666 - AluSg SINE Alu -12 298 1 13676 110 40 41 chr20 2979216 2980499 -69173383 - Tigger1 DNA MER2_type -1127 1291 1 327 287 97 100 chr20 2980715 2980924 -69172958 - L1M4 LINE L1 -1290 4856 4647 2371 106 3 0 chr20 2980924 2981235 -69172647 - AluSx SINE Alu 0 312 1 327 287 97 100 chr20 2981235 2981426 -69172456 - L1M4 LINE L1 -1499 4647 4457 1305 103 0 17 chr20 2981461 2981635 -69172247 - AluSg/x SINE Alu -8 304 134 1840 134 4 15 chr20 2981635 2981933 -69171949 - AluSq SINE Alu 0 313 36 266 261 77 70 chr20 2981976 2982059 -69171823 - L1P LINE L1 -1809 4337 4256 1857 152 0 40 chr20 2982059 2982355 -69171527 - AluJb SINE Alu -18 294 11 266 261 77 70 chr20 2982355 2982517 -69171365 - L1P LINE L1 -1890 4256 4089 1651 197 33 0 chr20 2982975 2983275 -69170607 + AluJo SINE Alu 1 310 -2 203 220 68 0 chr20 2983773 2983832 -69170050 + L2 LINE L2 64 126 -3188 2370 98 3 0 chr20 2987440 2987736 -69166146 + AluSx SINE Alu 2 298 -14 241 169 34 0 chr20 2987763 2987822 -69166060 + GA-rich Low_complexity Low_complexity 4 64 0 338 236 185 38 chr20 2990971 2991128 -69162754 - MIR SINE MIR -37 225 46 878 236 152 26 chr20 2991823 2992225 -69161657 - MLT1G3 LTR MaLR -51 539 16 697 136 7 102 chr20 2992228 2992375 -69161507 - FLAM_C SINE Alu 0 133 1 270 0 0 0 chr20 2992531 2992561 -69161321 + (T)n Simple_repeat Simple_repeat 1 30 0 294 241 60 65 chr20 2992996 2993212 -69160670 - L1MC4 LINE L1 -2 8040 7826 322 225 25 0 chr20 2993254 2993334 -69160548 - L1ME2 LINE L1 -10 6154 6073 2146 88 10 34 chr20 2993596 2993891 -69159991 + AluSq SINE Alu 1 288 -25 2505 70 3 3 chr20 2993999 2994301 -69159581 + AluSq SINE Alu 1 302 -11 404 273 148 34 chr20 2994338 2994547 -69159335 + L2 LINE L2 3079 3311 -2 202 196 20 15 chr20 2994548 2994615 -69159267 - MIR SINE MIR -68 140 84 195 152 0 0 chr20 2997076 2997109 -69156773 + MIR SINE MIR 117 149 -113 22 0 0 0 chr20 2997296 2997318 -69156564 + GC_rich Low_complexity Low_complexity 1 22 0 36 40 0 0 chr20 2997533 2997583 -69156299 + GC_rich Low_complexity Low_complexity 1 50 0 22 35 0 0 chr20 2998250 2998279 -69155603 + AT_rich Low_complexity Low_complexity 1 29 0 198 314 26 84 chr20 2998601 2998792 -69155090 + L2 LINE L2 2695 2874 -440 191 296 163 10 chr20 2999399 2999497 -69154385 - L2 LINE L2 -17 3255 3143 195 305 203 0 chr20 2999542 2999670 -69154212 - MIR SINE MIR 0 262 109 254 314 91 54 chr20 2999741 2999983 -69153899 - L2 LINE L2 -193 3079 2829 441 265 134 87 chr20 3000370 3000721 -69153161 - L1MC4a LINE L1 -273 5889 5527 218 298 36 36 chr20 3000815 3000899 -69152983 - MIR3 SINE MIR -36 172 89 2137 106 7 0 chr20 3001155 3001469 -69152413 - AluSp SINE Alu 0 318 3 2534 70 0 0 chr20 3001783 3002081 -69151801 + AluSc SINE Alu 1 298 -11 1955 131 20 16 chr20 3002116 3002422 -69151460 - AluJb SINE Alu -5 307 1 259 265 211 31 chr20 3002439 3002662 -69151220 - L1ME LINE L1 -356 5765 5503 280 392 21 0 chr20 3002923 3003020 -69150862 - L2 LINE L2 -40 3232 3134 556 239 148 7 chr20 3003164 3003319 -69150563 - MER5A DNA MER1_type 0 189 13 712 203 16 60 chr20 3003409 3003535 -69150347 - MER5B DNA MER1_type -1 177 60 2060 168 24 0 chr20 3003535 3003875 -69150007 + MER7A DNA MER2_type 1 346 0 712 203 16 60 chr20 3003875 3003930 -69149952 - MER5B DNA MER1_type -118 60 4 384 261 50 37 chr20 3003947 3004108 -69149774 - L2 LINE L2 -473 2841 2679 2595 220 132 81 chr20 3004133 3004657 -69149225 + Charlie7 DNA MER1_type 38 534 -2078 1691 127 54 14 chr20 3004657 3004933 -69148949 + AluJo SINE Alu 7 293 -19 2096 114 0 17 chr20 3004939 3005236 -69148646 + AluSc SINE Alu 1 292 -17 2595 220 132 81 chr20 3005236 3005432 -69148450 + Charlie7 DNA MER1_type 538 723 -1889 986 163 12 25 chr20 3005432 3005592 -69148290 - FRAM SINE Alu -8 158 1 2595 220 132 81 chr20 3005592 3005631 -69148251 + Charlie7 DNA MER1_type 723 759 -1853 2196 120 10 0 chr20 3005631 3005939 -69147943 + AluSx SINE Alu 1 311 -1 2595 220 132 81 chr20 3005939 3006192 -69147690 + Charlie7 DNA MER1_type 759 998 -1614 1718 159 23 29 chr20 3006192 3006501 -69147381 - AluJb SINE Alu 0 312 6 2595 220 132 81 chr20 3006501 3006701 -69147181 + Charlie7 DNA MER1_type 998 1322 -1290 1258 117 0 22 chr20 3006888 3007068 -69146814 - AluJb SINE Alu -7 305 130 655 121 0 0 chr20 3007069 3007168 -69146714 + MER46A DNA MER2_type 138 236 0 431 139 28 65 chr20 3007169 3007277 -69146605 + Charlie7 DNA MER1_type 1695 1798 -814 2890 6 0 0 chr20 3007283 3007594 -69146288 + AluY SINE Alu 1 311 0 4594 147 42 50 chr20 3007653 3008633 -69145249 - L1MB7 LINE L1 -21 6163 5195 1188 175 79 32 chr20 3008626 3008708 -69145174 - L1M4 LINE L1 -486 5692 5615 * 2458 66 27 0 chr20 3008708 3009009 -69144873 - AluY SINE Alu 0 311 3 1188 175 79 32 chr20 3009009 3009206 -69144676 - L1M4 LINE L1 -563 5615 5400 273 118 79 13 chr20 3009224 3009300 -69144582 + Charlie7 DNA MER1_type 1890 1970 -642 266 200 0 0 chr20 3009326 3009376 -69144506 + L1MC5 LINE L1 7184 7233 -728 1279 226 52 65 chr20 3009575 3009694 -69144188 + L1MC5 LINE L1 7397 7516 -445 2264 93 17 0 chr20 3009694 3009984 -69143898 + AluSg SINE Alu 1 295 -15 1279 226 52 65 chr20 3009984 3010400 -69143482 + L1MC5 LINE L1 7516 7925 -36 679 232 255 50 chr20 3010424 3010473 -69143409 + Charlie7 DNA MER1_type 1970 2008 -604 2362 80 3 37 chr20 3010473 3010797 -69143085 + AluSp SINE Alu 1 313 0 679 232 255 50 chr20 3010797 3011272 -69142610 + Charlie7 DNA MER1_type 2008 2602 -10 1846 145 26 23 chr20 3012188 3012492 -69141390 + AluJo SINE Alu 1 305 -7 1665 162 3 46 chr20 3013805 3014107 -69139775 - AluJo SINE Alu -23 289 1 509 299 72 5 chr20 3014219 3014426 -69139456 + MIR SINE MIR 34 254 -8 315 343 204 20 chr20 3014604 3015213 -69138669 + L2 LINE L2 1983 2703 -611 1146 155 23 50 chr20 3015619 3015838 -69138044 + MER2 DNA MER2_type 1 213 -132 2274 118 0 0 chr20 3015918 3016224 -69137658 + AluSx SINE Alu 1 306 -6 2468 173 9 24 chr20 3016271 3016693 -69137189 + MER47B DNA MER2_type 2 417 -1 297 239 28 73 chr20 3017025 3017134 -69136748 + L2 LINE L2 3179 3282 -31 239 333 9 26 chr20 3018259 3018373 -69135509 - MER102b DNA MER1_type 0 341 230 834 182 8 0 chr20 3018385 3018517 -69135365 - FLAM_C SINE Alu 0 133 1 2437 60 0 10 chr20 3018615 3018916 -69134966 + AluY SINE Alu 1 298 -13 2008 122 3 28 chr20 3018983 3019294 -69134588 - AluSx SINE Alu 0 304 1 1845 129 3 44 chr20 3019420 3019739 -69134143 - AluSx SINE Alu 0 307 1 259 241 85 14 chr20 3019862 3020003 -69133879 - L1M4 LINE L1 -3219 2927 2777 2364 86 0 13 chr20 3020003 3020317 -69133565 + AluSx SINE Alu 1 310 -2 4415 177 50 111 chr20 3020397 3021291 -69132591 - L1MC4 LINE L1 -70 7972 7025 2275 114 0 0 chr20 3021291 3021598 -69132284 - AluSx SINE Alu -5 307 1 4415 177 50 111 chr20 3021598 3021814 -69132068 - L1MC4 LINE L1 -1017 7025 6797 2256 107 0 35 chr20 3021814 3021997 -69131885 - AluSq SINE Alu -5 308 139 2318 52 58 3 chr20 3021997 3022288 -69131594 - AluY SINE Alu -3 308 2 2256 107 0 35 chr20 3022288 3022423 -69131459 - AluSq SINE Alu -174 139 1 4415 177 50 111 chr20 3022423 3022485 -69131397 - L1MC4 LINE L1 -1245 6797 6888 2342 92 0 0 chr20 3022485 3022779 -69131103 + AluSx SINE Alu 1 294 -18 4415 177 50 111 chr20 3022779 3022959 -69130923 - L1MC4 LINE L1 -1153 6889 6700 979 120 0 63 chr20 3022977 3023135 -69130747 + AluSx SINE Alu 25 172 -140 562 239 90 21 chr20 3023181 3023369 -69130513 - MER74A LTR ERVL -5 553 353 355 318 0 16 chr20 3023587 3023716 -69130166 - L1MC4 LINE L1 -1378 6664 6538 2035 126 0 11 chr20 3023734 3024044 -69129838 + AluSx SINE Alu 1 307 0 752 165 85 73 chr20 3024057 3024221 -69129661 - FRAM SINE Alu 0 166 1 415 256 0 0 chr20 3024354 3024440 -69129442 + Tigger6 DNA MER2_type 1 86 -1511 2409 78 0 3 chr20 3024489 3024784 -69129098 + AluSq SINE Alu 5 298 -15 2150 97 4 0 chr20 3024873 3025180 -69128702 - AluSg SINE Alu 0 308 1 2194 120 3 0 chr20 3025795 3026096 -69127786 - AluSx SINE Alu -10 302 1 984 228 53 22 chr20 3026825 3026953 -69126929 + MIR SINE MIR 25 165 -97 1488 119 38 38 chr20 3026953 3027189 -69126693 + MER46A DNA MER2_type 1 236 0 984 228 53 22 chr20 3027189 3027288 -69126594 + MIR SINE MIR 165 259 -3 1702 191 3 7 chr20 3027316 3027614 -69126268 + AluJo SINE Alu 1 297 -15 1544 167 20 40 chr20 3027824 3028124 -69125758 - AluJo SINE Alu -18 294 1 2224 100 7 3 chr20 3028300 3028600 -69125282 + AluSc SINE Alu 1 301 -8 1953 158 42 36 chr20 3028859 3029194 -69124688 + MER1B DNA MER1_type 1 337 0 21 0 0 0 chr20 3029407 3029428 -69124454 + AT_rich Low_complexity Low_complexity 1 21 0 2160 108 30 3 chr20 3029599 3029896 -69123986 - AluSp SINE Alu -8 305 1 7886 178 69 69 chr20 3030329 3032186 -69121696 - Cheshire DNA MER1_type -18 2402 542 694 177 123 140 chr20 3032186 3032429 -69121453 - MER8 DNA MER2_type 0 239 1 7886 178 69 69 chr20 3032429 3032520 -69121362 - Cheshire DNA MER1_type -1878 542 453 909 124 0 36 chr20 3032521 3032658 -69121224 + FLAM_C SINE Alu 1 132 -11 260 213 148 0 chr20 3032670 3032731 -69121151 - Cheshire DNA MER1_type -1953 467 398 572 221 8 30 chr20 3032787 3032918 -69120964 - Cheshire DNA MER1_type -2002 418 291 691 209 9 0 chr20 3033091 3033222 -69120660 + AluJb SINE Alu 174 305 0 1981 117 50 3 chr20 3033222 3033520 -69120362 + AluSx SINE Alu 1 312 0 465 202 71 0 chr20 3033536 3033635 -69120247 - Cheshire DNA MER1_type -2184 236 131 512 108 54 6 chr20 3033639 3033806 -69120076 + (TATAA)n Simple_repeat Simple_repeat 5 179 0 22 80 0 0 chr20 3033817 3033867 -69120015 + AT_rich Low_complexity Low_complexity 1 50 0 412 44 44 81 chr20 3033867 3034169 -69119713 + (TA)n Simple_repeat Simple_repeat 1 290 0 289 79 110 12 chr20 3034191 3034355 -69119527 + (TA)n Simple_repeat Simple_repeat 1 180 0 28 0 0 0 chr20 3034362 3034390 -69119492 + AT_rich Low_complexity Low_complexity 1 28 0 905 136 268 132 chr20 3034391 3034505 -69119377 - AluJo SINE Alu 0 302 205 2494 68 10 7 chr20 3034505 3034815 -69119067 - AluY SINE Alu 0 311 1 905 136 268 132 chr20 3034815 3034965 -69118917 - AluJo SINE Alu -97 205 2 25 51 0 0 chr20 3035005 3035044 -69118838 + AT_rich Low_complexity Low_complexity 1 39 0 1893 155 0 14 chr20 3035871 3036167 -69117715 + AluJb SINE Alu 1 292 -20 2004 136 0 13 chr20 3036248 3036556 -69117326 + AluJb SINE Alu 1 304 -8 256 220 20 0 chr20 3036609 3036659 -69117223 + MER3 DNA MER1_type 41 91 -118 * 391 174 47 23 chr20 3036633 3036719 -69117163 - MER3 DNA MER1_type -120 89 2 4243 217 100 26 chr20 3036873 3037004 -69116878 - L1MC4 LINE L1 0 7808 7688 2173 125 0 7 chr20 3037004 3037308 -69116574 + AluSx SINE Alu 1 302 -10 4243 217 100 26 chr20 3037308 3038356 -69115526 - L1MC4 LINE L1 -120 7688 6588 315 0 0 0 chr20 3038356 3038391 -69115491 + (TG)n Simple_repeat Simple_repeat 2 36 0 4243 217 100 26 chr20 3038391 3038550 -69115332 - L1MC4 LINE L1 -1220 6588 6442 1108 268 7 30 chr20 3038649 3038918 -69114964 - MER82 DNA MER2_type 0 653 391 949 122 6 72 chr20 3038918 3038989 -69114893 - L1MB5 LINE L1 -287 5887 5813 997 188 11 23 chr20 3038989 3039165 -69114717 - FAM SINE Alu 0 175 2 949 122 6 72 chr20 3039165 3039274 -69114608 - L1MB5 LINE L1 -361 5813 5719 1938 152 104 89 chr20 3039277 3039616 -69114266 - L1MB5 LINE L1 -748 5398 5065 1637 156 54 4 chr20 3039616 3039892 -69113990 + AluSx SINE Alu 1 290 -22 1938 152 104 89 chr20 3039892 3039944 -69113938 - L1MB5 LINE L1 -1081 5065 5015 1984 126 3 13 chr20 3039944 3040245 -69113637 - AluJb SINE Alu -6 306 9 1938 152 104 89 chr20 3040245 3040400 -69113482 - L1MB5 LINE L1 -1131 5015 4843 417 279 0 0 chr20 3040400 3040486 -69113396 + AluJ/FLAM SINE Alu 5 90 -222 * 844 175 91 0 chr20 3040482 3040636 -69113246 + AluJo/FRAM SINE Alu 136 303 -9 1198 177 12 36 chr20 3040636 3040858 -69113024 - L1MB5 LINE L1 -1291 4855 4638 2270 92 3 3 chr20 3040858 3041152 -69112730 - AluSx SINE Alu -2 310 17 1198 177 12 36 chr20 3041152 3041178 -69112704 - L1MB5 LINE L1 -1508 4638 4613 468 304 112 25 chr20 3041221 3041586 -69112296 - L1MEd LINE L1 -5710 409 13 814 164 25 0 chr20 3041601 3041723 -69112159 + FLAM_A SINE Alu 1 125 -8 2105 101 0 0 chr20 3041742 3042019 -69111863 + AluSg1 SINE Alu 24 300 -9 571 177 113 40 chr20 3042101 3042225 -69111657 - FLAM_A SINE Alu 0 133 1 558 267 53 65 chr20 3042699 3042961 -69110921 + MIR SINE MIR 4 262 0 280 257 135 0 chr20 3043379 3043453 -69110429 - L2 LINE L2 -26 3246 3163 595 159 62 9 chr20 3043455 3043568 -69110314 - FRAM SINE Alu -13 163 45 1441 209 95 0 chr20 3043714 3044020 -69109862 + MER58B DNA MER1_type 4 338 -3 422 189 32 162 chr20 3044242 3044427 -69109455 - MER5B DNA MER1_type -1 177 17 180 0 0 0 chr20 3045233 3045253 -69108629 + (T)n Simple_repeat Simple_repeat 1 20 0 327 329 89 0 chr20 3045560 3045718 -69108164 - LTR16A LTR ERVL -3 447 276 986 196 16 21 chr20 3045819 3046008 -69107874 - MER20 DNA MER1_type -1 218 31 225 0 0 0 chr20 3046245 3046270 -69107612 + (ATTG)n Simple_repeat Simple_repeat 4 28 0 2203 89 0 7 chr20 3046270 3046552 -69107330 - AluSx SINE Alu -32 280 1 2104 124 10 0 chr20 3046555 3046845 -69107037 - AluSx SINE Alu -19 293 1 1121 207 50 0 chr20 3046846 3047068 -69106814 - AluJo SINE Alu -21 291 59 21 0 0 0 chr20 3047313 3047334 -69106548 + AT_rich Low_complexity Low_complexity 1 21 0 194 262 24 0 chr20 3047358 3047400 -69106482 + MER5B DNA MER1_type 7 49 -129 2244 106 3 3 chr20 3047427 3047729 -69106153 + AluSq SINE Alu 1 302 -11 1447 223 58 81 chr20 3047804 3048047 -69105835 + L1ME3 LINE L1 5541 5788 -374 1681 144 53 14 chr20 3048047 3048331 -69105551 + AluSg SINE Alu 1 295 -15 1447 223 58 81 chr20 3048331 3048594 -69105288 + L1ME3 LINE L1 5788 6037 -125 2311 102 0 0 chr20 3048594 3048889 -69104993 - AluSc SINE Alu -14 295 1 1447 223 58 81 chr20 3048889 3048914 -69104968 + L1ME3 LINE L1 6037 6061 -101 3759 131 20 70 chr20 3048935 3049442 -69104440 - L1MB3 LINE L1 -12 6171 5707 2202 115 6 13 chr20 3049442 3049756 -69104126 + AluSx SINE Alu 1 312 0 3759 131 20 70 chr20 3049756 3049950 -69103932 - L1MB3 LINE L1 -476 5707 5505 1475 168 185 45 chr20 3050124 3050526 -69103356 - MLT1C LTR MaLR -2 465 8 259 218 0 0 chr20 3050516 3050571 -69103311 + AluJ/monomer SINE Alu 247 301 -1 * 192 152 0 0 chr20 3050644 3050677 -69103205 + CT-rich Low_complexity Low_complexity 2 34 0 2308 108 0 6 chr20 3050687 3051001 -69102881 - AluSx SINE Alu 0 312 1 760 71 152 0 chr20 3051001 3051113 -69102769 - AluSc SINE Alu -176 133 5 2093 116 0 0 chr20 3051642 3051918 -69101964 + AluSx SINE Alu 5 280 -32 195 100 0 0 chr20 3051918 3051948 -69101934 + (CAAT)n Simple_repeat Simple_repeat 4 33 0 602 238 106 58 chr20 3051954 3052030 -69101852 - HAL1 LINE L1 -796 1711 1640 207 0 0 0 chr20 3052030 3052053 -69101829 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1983 84 103 0 chr20 3052055 3052318 -69101564 - AluY SINE Alu -21 290 1 602 238 106 58 chr20 3052318 3052549 -69101333 - HAL1 LINE L1 -867 1640 1386 326 259 26 0 chr20 3052613 3052729 -69101153 - HAL1 LINE L1 -1279 1228 1110 1786 161 47 3 chr20 3052729 3053027 -69100855 - AluJb SINE Alu -1 311 1 1048 82 7 7 chr20 3053027 3053162 -69100720 - AluJb SINE Alu -177 135 1 1646 158 18 52 chr20 3053430 3053453 -69100429 + MLT1B LTR MaLR 74 96 -294 1915 180 0 0 chr20 3053453 3053753 -69100129 + AluJo SINE Alu 1 300 -12 1646 158 18 52 chr20 3053753 3054057 -69099825 + MLT1B LTR MaLR 96 390 0 2186 154 103 19 chr20 3054357 3054786 -69099096 - MLT1C LTR MaLR -2 465 1 194 284 32 42 chr20 3054991 3055086 -69098796 + MER5A DNA MER1_type 57 150 -39 261 0 0 0 chr20 3055629 3055658 -69098224 + (TG)n Simple_repeat Simple_repeat 2 30 0 688 159 130 22 chr20 3055660 3055798 -69098084 - FRAM SINE Alu -30 146 1 212 226 189 0 chr20 3055803 3055856 -69098026 + L2 LINE L2 3208 3270 -2 276 317 30 10 chr20 3055891 3055992 -69097890 + L2 LINE L2 3208 3310 -3 389 209 129 25 chr20 3057073 3057236 -69096646 - L1MC/D LINE L1 -2322 5486 5307 1914 147 3 22 chr20 3057327 3057346 -69096536 - AluSx SINE Alu -5 307 289 288 0 0 0 chr20 3057346 3057378 -69096504 + (TTGG)n Simple_repeat Simple_repeat 4 35 0 1914 147 3 22 chr20 3057378 3057671 -69096211 - AluSx SINE Alu -23 289 1 1511 165 8 12 chr20 3058051 3058306 -69095576 - AluJb SINE Alu -49 263 10 289 148 136 34 chr20 3058482 3058570 -69095312 - L1MD3 LINE L1 0 7995 7899 2222 116 3 0 chr20 3058580 3058882 -69095000 - AluSx SINE Alu -9 303 1 3520 117 10 54 chr20 3058954 3059480 -69094402 - L1MA8 LINE L1 -181 6110 5612 1254 189 96 62 chr20 3059480 3059645 -69094237 - AluJo SINE Alu -1 301 120 2090 120 0 13 chr20 3059645 3059944 -69093938 + AluSq SINE Alu 3 297 -16 1254 189 96 62 chr20 3059944 3060069 -69093813 - AluJo SINE Alu -182 120 1 3520 117 10 54 chr20 3060069 3060139 -69093743 - L1MA8 LINE L1 -679 5612 5540 2806 185 125 146 chr20 3060193 3060238 -69093644 - L1ME LINE L1 -3890 2650 2606 901 148 0 15 chr20 3060238 3060373 -69093509 - FLAM_C SINE Alu 0 133 1 1805 137 3 45 chr20 3060379 3060671 -69093211 - AluJb SINE Alu -20 292 13 2806 185 125 146 chr20 3060671 3061028 -69092854 - L1ME LINE L1 -3939 2601 2238 2329 105 0 3 chr20 3061028 3061332 -69092550 - AluSc SINE Alu -5 304 2 2806 185 125 146 chr20 3061332 3061948 -69091934 - L1ME LINE L1 -4302 2238 1610 833 183 0 0 chr20 3061948 3062068 -69091814 + FLAM_C SINE Alu 2 121 -22 2806 185 125 146 chr20 3062068 3062087 -69091795 - L1ME LINE L1 -4930 1610 1592 2209 117 0 3 chr20 3062087 3062394 -69091488 - AluSx SINE Alu -4 308 3 2806 185 125 146 chr20 3062394 3063262 -69090620 - L1ME LINE L1 -4948 1592 730 953 244 29 77 chr20 3063432 3063735 -69090147 - L1ME LINE L1 -6181 359 76 2375 84 0 10 chr20 3063735 3064046 -69089836 + AluSq SINE Alu 1 308 -5 953 244 29 77 chr20 3064046 3064119 -69089763 - L1ME LINE L1 -6464 76 1 765 200 0 15 chr20 3064230 3064365 -69089517 - FLAM_A SINE Alu 0 133 1 291 346 0 0 chr20 3064396 3064474 -69089408 + MER58 DNA MER1_type 1 78 -263 719 165 9 0 chr20 3064475 3064590 -69089292 - AluJb SINE Alu -15 297 182 683 183 107 0 chr20 3064616 3064747 -69089135 + MER58 DNA MER1_type 142 2365 -55 2281 83 6 22 chr20 3064924 3065236 -69088646 - AluSx SINE Alu 0 312 6 550 308 125 76 chr20 3065429 3066000 -69087882 + L2 LINE L2 2654 3251 -21 215 204 45 0 chr20 3065966 3066010 -69087872 + MIR SINE MIR 214 259 -3 * 337 351 32 5 chr20 3066054 3066239 -69087643 - L1MEc LINE L1 -2235 4191 4002 344 305 17 17 chr20 3066291 3066468 -69087414 - L1MEc LINE L1 -3835 2591 2415 490 193 274 0 chr20 3066495 3066630 -69087252 + MLT2D LTR ERVL 189 360 -54 29 0 0 0 chr20 3066635 3066664 -69087218 + AT_rich Low_complexity Low_complexity 1 29 0 1063 119 134 20 chr20 3066719 3066920 -69086962 - MER44D DNA MER2_type 0 605 327 606 149 0 91 chr20 3067032 3067153 -69086729 + Tigger7 DNA MER2_type 2378 2487 0 27 92 0 0 chr20 3067153 3067229 -69086653 + AT_rich Low_complexity Low_complexity 1 76 0 1243 222 52 10 chr20 3067246 3067534 -69086348 - MLT2D LTR ERVL -114 300 1 1194 208 12 8 chr20 3067534 3067775 -69086107 - ERVL-D LTR ERVL -7 5757 5516 1342 255 85 51 chr20 3067817 3067950 -69085932 - MLT1H LTR MaLR -1 548 421 2244 119 0 3 chr20 3067950 3068252 -69085630 - AluSx SINE Alu -11 301 1 1342 255 85 51 chr20 3068252 3068648 -69085234 - MLT1H LTR MaLR -128 421 1 633 266 50 54 chr20 3068654 3069105 -69084777 - L1MEc LINE L1 -4928 1648 1114 270 0 0 0 chr20 3069493 3069523 -69084359 + (TG)n Simple_repeat Simple_repeat 2 31 0 180 0 0 0 chr20 3069534 3069554 -69084328 + (TTTA)n Simple_repeat Simple_repeat 3 22 0 1971 151 0 0 chr20 3069557 3069841 -69084041 + AluSx SINE Alu 1 284 -28 185 197 16 0 chr20 3069841 3069902 -69083980 + (TA)n Simple_repeat Simple_repeat 1 62 0 2521 75 0 0 chr20 3070478 3070786 -69083096 + AluSg SINE Alu 1 308 -2 2465 71 0 3 chr20 3072582 3072891 -69080991 + AluY SINE Alu 3 310 -1 206 121 0 0 chr20 3073213 3073246 -69080636 + (T)n Simple_repeat Simple_repeat 1 33 0 818 136 24 16 chr20 3073377 3073502 -69080380 - FLAM_C SINE Alu -17 126 1 839 276 120 27 chr20 3073504 3074267 -69079615 - L1 LINE L1 -1983 4163 3277 2462 53 0 17 chr20 3074267 3074567 -69079315 + AluY SINE Alu 1 295 -16 839 276 120 27 chr20 3074567 3074605 -69079277 - L1 LINE L1 -2869 3277 3244 633 269 19 54 chr20 3074712 3074972 -69078910 - L1ME1 LINE L1 -15 6151 5901 2267 93 3 7 chr20 3074999 3075309 -69078573 - AluY SINE Alu -1 310 2 1830 221 93 14 chr20 3075326 3075769 -69078113 + MER74A LTR ERVL 77 554 -4 2068 93 68 0 chr20 3075769 3076049 -69077833 + AluSc SINE Alu 1 299 -10 1352 211 34 10 chr20 3076049 3076453 -69077429 - L1ME1 LINE L1 -583 5583 5170 4399 130 24 42 chr20 3076454 3077153 -69076729 - L1MB3 LINE L1 -7 6176 5489 2265 113 3 0 chr20 3077153 3077463 -69076419 - AluY SINE Alu 0 311 1 4399 130 24 42 chr20 3077463 3077508 -69076374 - L1MB3 LINE L1 -694 5489 5445 1846 147 51 0 chr20 3077509 3077801 -69076081 - AluSg SINE Alu -3 307 1 180 0 0 0 chr20 3077804 3077824 -69076058 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 1702 138 33 53 chr20 3077829 3077988 -69075894 - AluJo SINE Alu -14 298 146 2389 76 13 3 chr20 3077988 3078289 -69075593 - AluSq SINE Alu -9 304 1 1702 138 33 53 chr20 3078289 3078433 -69075449 - AluJo SINE Alu -166 146 1 2274 227 52 5 chr20 3078433 3079053 -69074829 - L1MB3 LINE L1 -814 5332 4684 193 345 171 29 chr20 3079848 3080329 -69073553 + L2 LINE L2 2342 2890 -424 326 173 0 0 chr20 3080512 3080608 -69073274 + AluJ/FRAM SINE Alu 232 327 0 1271 244 128 28 chr20 3080611 3080914 -69072968 - L1MC/D LINE L1 -2029 5779 5419 2433 70 0 0 chr20 3080914 3081212 -69072670 + AluY SINE Alu 1 298 -13 1271 244 128 28 chr20 3081212 3081338 -69072544 - L1MC/D LINE L1 -2389 5419 5307 218 289 70 23 chr20 3081348 3081476 -69072406 - L2 LINE L2 -1476 1838 1705 652 320 114 47 chr20 3081615 3082386 -69071496 - L2 LINE L2 -1856 1458 636 2236 82 6 79 chr20 3082449 3082779 -69071103 + AluSx SINE Alu 1 306 -6 4885 180 66 29 chr20 3083510 3083581 -69070301 - L1MC1 LINE L1 -2 6331 6264 2064 150 0 0 chr20 3083581 3083881 -69070001 + AluSg SINE Alu 1 300 -10 4885 180 66 29 chr20 3083881 3084160 -69069722 - L1MC1 LINE L1 -69 6264 5997 2464 55 7 0 chr20 3084160 3084453 -69069429 - AluY SINE Alu -12 299 5 1717 186 7 7 chr20 3084457 3084747 -69069135 - AluJo SINE Alu -22 290 1 4885 180 66 29 chr20 3084747 3086136 -69067746 - L1MC1 LINE L1 -338 5995 4518 237 282 107 23 chr20 3086272 3086403 -69067479 - L1MC/D LINE L1 -1096 5050 4909 248 345 12 12 chr20 3086867 3086951 -69066931 + L2 LINE L2 3151 3234 -38 271 234 0 0 chr20 3087125 3087189 -69066693 - MER5B DNA MER1_type -18 160 97 2028 122 28 0 chr20 3087232 3087520 -69066362 + AluSx SINE Alu 3 298 -14 743 148 74 0 chr20 3087545 3087667 -69066215 + MER46A DNA MER2_type 1 131 -105 1674 184 3 14 chr20 3087667 3087960 -69065922 + AluJo SINE Alu 1 290 -22 309 258 72 0 chr20 3089771 3089868 -69064014 + MIR SINE MIR 94 197 -65 834 216 45 61 chr20 3090107 3090352 -69063530 + MIR SINE MIR 1 241 -21 1823 264 169 22 chr20 3091285 3091489 -69062393 - HAL1 LINE L1 -271 2236 2063 2062 139 0 0 chr20 3091489 3091777 -69062105 + AluJb SINE Alu 1 288 -24 1823 264 169 22 chr20 3091777 3092522 -69061360 - HAL1 LINE L1 -444 2063 1147 1634 181 10 14 chr20 3092542 3092834 -69061048 + AluJo SINE Alu 1 291 -21 1775 151 20 37 chr20 3092836 3093135 -69060747 + AluSx SINE Alu 1 294 -18 2072 116 10 0 chr20 3093163 3093455 -69060427 - AluSg SINE Alu -15 295 1 826 69 0 0 chr20 3093483 3093585 -69060297 + AluY SINE Alu 1 102 -209 2266 70 0 14 chr20 3093595 3093906 -69059976 + AluY SINE Alu 1 307 0 937 289 152 38 chr20 3094047 3094716 -69059166 - L1MC/D LINE L1 -743 5403 4812 180 0 0 0 chr20 3094716 3094736 -69059146 + (TG)n Simple_repeat Simple_repeat 2 21 0 937 289 152 38 chr20 3094736 3095740 -69058142 - L1MC/D LINE L1 -1334 4812 3850 1899 89 44 4 chr20 3095745 3096039 -69057843 - AluSg SINE Alu 0 305 1 1366 197 16 4 chr20 3096152 3096401 -69057481 - AluJo SINE Alu -48 264 13 1887 152 0 10 chr20 3096634 3096930 -69056952 - AluJb SINE Alu -19 293 1 436 293 146 40 chr20 3096930 3097333 -69056549 - L1MC/D LINE L1 -2751 3395 2950 800 267 105 83 chr20 3097346 3097802 -69056080 - MLT1J LTR MaLR -21 429 1 2294 89 3 19 chr20 3097848 3098164 -69055718 - AluY SINE Alu 0 311 1 877 211 6 6 chr20 3098174 3098335 -69055547 - AluSg/x SINE Alu -25 285 125 1922 93 4 16 chr20 3098340 3098598 -69055284 - AluSx SINE Alu -15 297 43 2377 73 0 51 chr20 3100906 3101219 -69052663 + AluSg SINE Alu 1 297 -13 1747 151 4 0 chr20 3101307 3101566 -69052316 + AluJb SINE Alu 34 293 -19 194 136 23 0 chr20 3101685 3101729 -69052153 + (TA)n Simple_repeat Simple_repeat 1 45 0 921 211 51 0 chr20 3102622 3102797 -69051085 - MER58A DNA MER1_type -39 185 2 270 310 164 41 chr20 3102897 3103068 -69050814 - MIR SINE MIR -50 212 21 446 267 58 58 chr20 3103219 3103432 -69050450 - L1MEd LINE L1 -1218 1272 963 1660 124 0 87 chr20 3103432 3103754 -69050128 - AluJo SINE Alu -18 294 1 2134 110 3 0 chr20 3103802 3104122 -69049760 - AluSp SINE Alu 0 313 1 1731 132 64 0 chr20 3104196 3104477 -69049405 + AluSx SINE Alu 1 299 -13 669 160 15 61 chr20 3104486 3104617 -69049265 + FLAM_C SINE Alu 9 133 -10 529 273 49 23 chr20 3104991 3105255 -69048627 + L1MC5 LINE L1 7513 7783 -178 969 228 39 0 chr20 3105277 3105483 -69048399 + MER20 DNA MER1_type 1 214 -5 2030 92 7 0 chr20 3105989 3106270 -69047612 - AluSg SINE Alu 0 310 28 433 272 67 56 chr20 3106386 3106566 -69047316 - L2 LINE L2 -18 3295 3114 2244 97 0 10 chr20 3106609 3106908 -69046974 - AluSg SINE Alu -14 296 1 246 284 265 0 chr20 3106920 3107022 -69046860 - MIR SINE MIR -17 245 117 1482 298 155 34 chr20 3107029 3108013 -69045869 - L2 LINE L2 -200 3072 1977 998 266 63 39 chr20 3108067 3108480 -69045402 + L2 LINE L2 1656 2078 -1236 942 284 135 31 chr20 3108487 3109044 -69044838 + L2 LINE L2 2697 3310 -3 515 296 45 38 chr20 3109040 3109304 -69044578 - L2 LINE L2 -1345 1969 1704 * 545 151 35 0 chr20 3109703 3109789 -69044093 - AluJ/FLAM SINE Alu -223 89 1 1498 185 11 0 chr20 3109795 3110113 -69043769 - AluJb SINE Alu 0 325 5 454 257 136 7 chr20 3110305 3110445 -69043437 - L2 LINE L2 -14 3299 3142 474 333 26 19 chr20 3112616 3112772 -69041110 - L2 LINE L2 -1 3271 3115 2181 88 0 0 chr20 3113069 3113352 -69040530 + AluSc SINE Alu 7 289 -20 209 361 52 0 chr20 3113354 3113451 -69040431 - L2 LINE L2 -228 3044 2943 239 368 39 45 chr20 3113621 3113646 -69040236 - L2 LINE L2 -601 2713 2689 2237 88 0 0 chr20 3113646 3113942 -69039940 + AluY SINE Alu 1 296 -15 239 368 39 45 chr20 3113942 3114071 -69039811 - L2 LINE L2 -625 2689 2560 378 252 160 28 chr20 3114094 3114342 -69039540 - MLT1L LTR MaLR -107 508 126 1547 174 3 46 chr20 3114346 3114650 -69039232 + AluJb SINE Alu 1 291 -21 270 273 153 40 chr20 3114762 3114912 -69038970 - L2 LINE L2 -566 2748 2582 2112 100 0 35 chr20 3114983 3115294 -69038588 + AluSq SINE Alu 2 301 -12 315 206 279 29 chr20 3115622 3115758 -69038124 - MER70-int LTR ERVL -1517 4137 3968 406 251 21 112 chr20 3116059 3116150 -69037732 - MER70-int LTR ERVL -2183 3471 3404 2230 99 0 0 chr20 3116150 3116452 -69037430 + AluSq SINE Alu 6 307 -6 406 251 21 112 chr20 3116452 3116547 -69037335 - MER70-int LTR ERVL -2250 3404 3302 1501 169 37 4 chr20 3116721 3116994 -69036888 + AluJo SINE Alu 1 282 -30 264 254 48 0 chr20 3117074 3117137 -69036745 - MER70-int LTR ERVL -3260 1763 1698 252 122 0 0 chr20 3117822 3117863 -69036019 + (CAGA)n Simple_repeat Simple_repeat 3 43 0 668 312 59 30 chr20 3117888 3118225 -69035657 - MER70-int LTR ERVL -3574 2080 1734 2238 98 0 0 chr20 3118758 3119055 -69034827 + AluSx SINE Alu 1 297 -15 814 142 0 0 chr20 3119208 3119328 -69034554 - FLAM_C SINE Alu -23 120 1 253 219 29 109 chr20 3120011 3120148 -69033734 - LTR67 LTR ERVL -3 554 429 498 254 202 21 chr20 3120490 3121045 -69032837 + L1MC4a LINE L1 5213 5399 -747 257 295 129 20 chr20 3121285 3121512 -69032370 + L3 LINE CR1 966 1269 -308 1335 132 26 161 chr20 3121759 3122107 -69031775 + AluJo SINE Alu 1 301 -1 278 311 146 0 chr20 3122531 3122634 -69031248 + L3 LINE CR1 1388 1505 -72 330 183 44 29 chr20 3122778 3122915 -69030967 + (TATAA)n Simple_repeat Simple_repeat 5 143 0 2484 260 121 17 chr20 3122935 3123914 -69029968 + L1ME2 LINE L1 4283 5484 -680 1978 113 0 14 chr20 3123914 3124206 -69029676 + AluSg SINE Alu 1 288 -22 2484 260 121 17 chr20 3124206 3124697 -69029185 + L1ME2 LINE L1 5484 5922 -242 21 82 0 0 chr20 3124876 3124925 -69028957 + AT_rich Low_complexity Low_complexity 1 49 0 1377 108 5 27 chr20 3125847 3126070 -69027812 + AluJo SINE Alu 85 302 -10 2226 95 3 3 chr20 3126233 3126537 -69027345 - AluSp SINE Alu -9 304 1 555 293 163 49 chr20 3126600 3127204 -69026678 + L2 LINE L2 2636 3313 0 327 307 78 42 chr20 3127219 3127411 -69026471 - L1ME LINE L1 -353 5768 5570 1555 168 32 36 chr20 3127447 3127756 -69026126 - AluJo SINE Alu -4 308 1 267 228 14 44 chr20 3127889 3127926 -69025956 - MIR SINE MIR -66 142 143 2232 99 0 0 chr20 3127926 3128228 -69025654 - AluSx SINE Alu -10 302 1 267 228 14 44 chr20 3128228 3128290 -69025592 - MIR SINE MIR -64 144 82 1744 161 3 10 chr20 3129186 3129491 -69024391 + AluJo SINE Alu 10 312 0 717 186 23 0 chr20 3129938 3130067 -69023815 - FLAM_C SINE Alu -10 133 2 1287 198 72 0 chr20 3130103 3130381 -69023501 - AluJo SINE Alu -6 306 9 309 246 64 9 chr20 3130412 3130522 -69023360 + Charlie7 DNA MER1_type 2496 2611 -1 1842 121 37 14 chr20 3130543 3130840 -69023042 - AluSx SINE Alu -8 304 1 213 189 0 0 chr20 3130879 3130916 -69022966 + (TG)n Simple_repeat Simple_repeat 2 38 0 391 187 81 80 chr20 3130955 3131164 -69022718 - L1MC4a LINE L1 -312 5809 5669 288 111 0 0 chr20 3131705 3131750 -69022132 + (TG)n Simple_repeat Simple_repeat 2 46 0 2672 108 52 70 chr20 3132081 3132522 -69021360 + L1MB3 LINE L1 5694 6126 -57 1902 77 19 71 chr20 3132522 3132832 -69021050 + AluSx SINE Alu 1 294 -18 2672 108 52 70 chr20 3132832 3132889 -69020993 + L1MB3 LINE L1 6126 6183 0 990 286 95 40 chr20 3133701 3133764 -69020118 - MLT1L LTR MaLR -4 611 553 1828 149 7 3 chr20 3133764 3134060 -69019822 - AluSx SINE Alu -15 297 1 990 286 95 40 chr20 3134060 3134257 -69019625 - MLT1L LTR MaLR -62 553 368 2578 45 0 0 chr20 3134257 3134568 -69019314 + AluY SINE Alu 1 311 0 990 286 95 40 chr20 3134568 3134884 -69018998 - MLT1L LTR MaLR -247 368 2 316 250 0 25 chr20 3135214 3135294 -69018588 - L2 LINE L2 -1 3271 3194 209 346 39 0 chr20 3135424 3135528 -69018354 - L2 LINE L2 -251 3021 2914 428 255 46 72 chr20 3135603 3135756 -69018126 - LTR67 LTR ERVL 0 557 409 392 300 61 33 chr20 3135798 3135978 -69017904 - LTR67 LTR ERVL -259 298 114 510 198 9 9 chr20 3136714 3136830 -69017052 - L1MB8 LINE L1 -15 6163 6048 614 185 62 19 chr20 3136830 3136992 -69016890 - L1MB8 LINE L1 -5 6173 6005 2122 89 24 0 chr20 3137330 3137621 -69016261 - AluSp SINE Alu -15 298 1 2038 112 0 20 chr20 3138266 3138569 -69015313 + AluSx SINE Alu 1 297 -15 1979 118 13 22 chr20 3139201 3139516 -69014366 - AluSx SINE Alu 0 312 1 1830 142 28 0 chr20 3140376 3140658 -69013224 + AluSx SINE Alu 1 290 -22 1149 243 165 27 chr20 3140749 3141300 -69012582 - HAL1 LINE L1 -221 2286 1660 271 0 25 25 chr20 3142111 3142151 -69011731 + (TTTTG)n Simple_repeat Simple_repeat 2 41 0 6318 62 21 26 chr20 3142151 3144018 -69009864 - SVA Other Other -520 1369 13 2109 63 45 11 chr20 3144021 3144308 -69009574 - AluY SINE Alu -14 297 1 282 284 63 63 chr20 3145741 3145868 -69008014 + MIR3 SINE MIR 3 129 -79 4202 171 50 37 chr20 3146850 3147806 -69006076 + LTR5 LTR ERVK 1 969 0 986 215 25 10 chr20 3148801 3149001 -69004881 - MER58A DNA MER1_type -15 209 7 2265 97 0 0 chr20 3149083 3149382 -69004500 + AluSg SINE Alu 1 299 -11 2178 107 3 0 chr20 3149499 3149797 -69004085 + AluSx SINE Alu 2 300 -12 351 176 51 95 chr20 3149803 3149847 -69004035 - MER5A DNA MER1_type -80 109 65 2004 117 30 0 chr20 3149847 3150147 -69003735 - AluSq SINE Alu -4 309 1 351 176 51 95 chr20 3150147 3150214 -69003668 - MER5A DNA MER1_type -124 65 4 332 316 33 61 chr20 3152326 3152538 -69001344 - L3 LINE CR1 -10 1567 1362 201 303 248 41 chr20 3152549 3152839 -69001043 - L2 LINE L2 -416 2898 2549 356 263 157 67 chr20 3152860 3153027 -69000855 - L3 LINE CR1 -611 966 815 2019 133 3 13 chr20 3153027 3153046 -69000836 - AluJb SINE Alu -14 298 280 217 0 0 0 chr20 3153046 3153070 -69000812 + (TTTG)n Simple_repeat Simple_repeat 1 176 0 2019 133 3 13 chr20 3153070 3153350 -69000532 - AluJb SINE Alu -32 280 2 356 263 157 67 chr20 3153350 3153451 -69000431 - L3 LINE CR1 -762 815 666 2022 116 46 0 chr20 3153451 3153736 -69000146 - AluSx SINE Alu -12 300 3 356 263 157 67 chr20 3153736 3153766 -69000116 - L3 LINE CR1 -911 666 640 2230 129 20 0 chr20 3154587 3154890 -68998992 - AluSx SINE Alu -3 309 1 2148 295 171 47 chr20 3155326 3156396 -68997486 + L2 LINE L2 605 1542 -1772 2374 98 0 0 chr20 3156396 3156691 -68997191 + AluSc SINE Alu 1 295 -14 2148 295 171 47 chr20 3156691 3157524 -68996358 + L2 LINE L2 1542 2743 -571 2497 70 7 0 chr20 3157530 3157831 -68996051 + AluSp SINE Alu 1 303 -10 2192 122 7 7 chr20 3157900 3158196 -68995686 + AluSx SINE Alu 4 299 -13 408 198 79 0 chr20 3158822 3158923 -68994959 - L2 LINE L2 -4 3268 3160 193 196 87 0 chr20 3160540 3160586 -68993296 + L2 LINE L2 3219 3268 -4 184 321 99 30 chr20 3163656 3163787 -68990095 - L2 LINE L2 -228 3044 2905 2106 125 7 3 chr20 3164799 3165095 -68988787 + AluJb SINE Alu 1 297 -15 2392 92 13 0 chr20 3165097 3165403 -68988479 + AluSx SINE Alu 1 310 -2 21 0 0 0 chr20 3165403 3165424 -68988458 + AT_rich Low_complexity Low_complexity 1 21 0 26 50 0 0 chr20 3170436 3170476 -68983406 + GC_rich Low_complexity Low_complexity 1 40 0 2008 78 52 0 chr20 3171029 3171325 -68982557 + AluSx SINE Alu 1 310 0 772 221 121 5 chr20 3172084 3172283 -68981599 + MER58A DNA MER1_type 2 223 -1 2575 66 3 0 chr20 3172923 3173227 -68980655 - AluY SINE Alu -6 305 1 349 273 76 0 chr20 3174526 3174658 -68979224 - HERVL LTR ERVL -2987 2667 2526 1752 97 112 4 chr20 3175210 3175477 -68978405 + AluSx SINE Alu 1 296 -16 2254 104 3 0 chr20 3175902 3176191 -68977691 + AluSx SINE Alu 1 290 -22 1781 115 87 52 chr20 3176201 3176487 -68977395 + AluSx SINE Alu 1 296 -16 1893 166 6 29 chr20 3176625 3176939 -68976943 + AluJb SINE Alu 1 307 -5 678 235 18 54 chr20 3177255 3177476 -68976406 + MIR SINE MIR 40 252 -10 2234 79 32 7 chr20 3177481 3177792 -68976090 - AluSp SINE Alu 0 318 1 213 39 0 0 chr20 3177795 3177821 -68976061 + (TTA)n Simple_repeat Simple_repeat 2 27 0 2478 68 3 0 chr20 3178022 3178317 -68975565 - AluSp SINE Alu -15 298 3 2441 93 0 6 chr20 3178350 3178662 -68975220 + AluSx SINE Alu 1 310 -2 328 279 18 0 chr20 3178662 3178773 -68975109 - L1MC4 LINE L1 -164 7878 7766 839 129 0 43 chr20 3178834 3178973 -68974909 - FLAM_C SINE Alu 0 133 1 1819 145 29 17 chr20 3178973 3179311 -68974571 - L1MB2 LINE L1 -346 7244 6902 1977 115 7 46 chr20 3179311 3179615 -68974267 - AluSx SINE Alu -3 309 18 248 122 41 41 chr20 3179699 3179748 -68974134 - L1MB2 LINE L1 -3400 4165 4117 2421 99 0 0 chr20 3179789 3180102 -68973780 - AluSp SINE Alu 0 313 1 405 290 21 11 chr20 3180103 3180289 -68973593 - L1MB2 LINE L1 -4345 3220 3033 916 184 72 28 chr20 3180301 3180366 -68973516 - L1MB2 LINE L1 -4903 2662 2601 1567 180 6 54 chr20 3180366 3180683 -68973199 - AluJo SINE Alu -5 307 6 916 184 72 28 chr20 3180683 3180867 -68973015 - L1MB2 LINE L1 -4964 2601 2402 925 143 0 0 chr20 3180868 3181001 -68972881 + AluSq/x SINE Alu 1 133 -180 1995 137 7 23 chr20 3181005 3181143 -68972739 + AluSq SINE Alu 1 140 -173 2908 3 0 3 chr20 3181143 3181451 -68972431 + AluYa5 SINE Alu 5 311 0 1995 137 7 23 chr20 3181451 3181619 -68972263 + AluSq SINE Alu 140 302 -11 2271 119 3 3 chr20 3181798 3182109 -68971773 - AluJb SINE Alu 0 312 2 454 344 69 20 chr20 3182128 3182426 -68971456 + ERVL LTR ERVL 2908 3253 -1927 2279 102 3 0 chr20 3182480 3182774 -68971108 - AluSx SINE Alu -2 310 16 2203 104 14 0 chr20 3182785 3183087 -68970795 - AluSq SINE Alu 0 306 1 275 75 0 57 chr20 3183088 3183141 -68970741 + L1MA9 LINE L1 6263 6312 0 1426 261 80 56 chr20 3183254 3183864 -68970018 + L1 LINE L1 1110 1734 -5475 402 223 10 0 chr20 3183895 3183998 -68969884 + L1 LINE L1 3264 3367 -3841 1614 94 163 12 chr20 3184053 3184321 -68969561 - AluSg1 SINE Alu 0 305 1 3013 159 31 64 chr20 3184388 3185155 -68968727 + L1 LINE L1 4068 4809 -2399 513 238 0 0 chr20 3185155 3185256 -68968626 - Tigger2 DNA MER2_type -10 2708 2608 4558 158 32 23 chr20 3185259 3185315 -68968567 + L1 LINE L1 5498 5552 -1656 2492 65 3 10 chr20 3185315 3185621 -68968261 + AluSg SINE Alu 3 306 -4 4558 158 32 23 chr20 3185621 3186246 -68967636 + L1 LINE L1 5552 6169 -1039 189 0 0 0 chr20 3186246 3186267 -68967615 + (CAA)n Simple_repeat Simple_repeat 1 21 0 4558 158 32 23 chr20 3186267 3186462 -68967420 + L1 LINE L1 6169 6387 -821 2509 73 7 3 chr20 3186462 3186765 -68967117 + AluSg SINE Alu 1 304 -6 4558 158 32 23 chr20 3186765 3186808 -68967074 + L1 LINE L1 6387 6428 -780 661 147 0 0 chr20 3186809 3186911 -68966971 + FRAM SINE Alu 62 163 -13 2389 80 0 10 chr20 3186911 3187213 -68966669 + AluY SINE Alu 1 299 -12 4587 63 4 0 chr20 3187217 3187756 -68966126 + SVA Other Other 839 1379 -7 500 111 9 10 chr20 3187760 3187883 -68965999 + L1M1 LINE L1 5315 5440 -851 1887 144 14 7 chr20 3187883 3188175 -68965707 + AluSx SINE Alu 1 294 -18 1047 140 67 0 chr20 3188176 3188340 -68965542 + AluJb SINE Alu 133 307 -5 799 248 124 28 chr20 3188340 3188365 -68965517 + L1ME1 LINE L1 5804 5825 -341 4069 117 21 44 chr20 3188365 3189072 -68964810 - LTR8 LTR ERV1 0 691 1 799 248 124 28 chr20 3189072 3189368 -68964514 + L1ME1 LINE L1 5825 6156 -10 771 233 96 27 chr20 3189504 3189577 -68964305 + L2 LINE L2 2140 2207 -1107 2274 109 10 0 chr20 3189577 3189880 -68964002 + AluSp SINE Alu 1 306 -7 771 233 96 27 chr20 3189880 3190098 -68963784 + L2 LINE L2 2207 2451 -863 2269 114 0 3 chr20 3190098 3190406 -68963476 - AluSx SINE Alu -5 307 1 1020 151 13 0 chr20 3190414 3190566 -68963316 - AluSg/x SINE Alu -22 288 135 1057 221 223 7 chr20 3190567 3190757 -68963125 + L2 LINE L2 2439 2587 -727 2386 75 3 3 chr20 3190757 3191052 -68962830 - AluY SINE Alu -14 297 3 1057 221 223 7 chr20 3191052 3191287 -68962595 + L2 LINE L2 2587 2956 -358 237 217 0 22 chr20 3191298 3191344 -68962538 + MLT1E1 LTR MaLR 7 51 -573 1754 95 95 39 chr20 3191414 3191697 -68962185 - AluSx SINE Alu -13 299 1 287 161 0 0 chr20 3191698 3191754 -68962128 + Alu SINE Alu 243 298 -4 700 203 203 42 chr20 3191825 3192200 -68961682 + MLT1E1 LTR MaLR 123 562 -31 2016 153 0 10 chr20 3192200 3192508 -68961374 - AluJo SINE Alu -7 305 1 700 203 203 42 chr20 3192508 3192543 -68961339 + MLT1E1 LTR MaLR 562 590 -3 317 230 59 134 chr20 3192574 3192813 -68961069 + L2 LINE L2 3028 3248 -65 1164 249 143 5 chr20 3193310 3193687 -68960195 - LTR16A LTR ERVL -3 447 19 1578 96 5 36 chr20 3193796 3194016 -68959866 - AluSg/x SINE Alu -17 295 83 1099 232 51 40 chr20 3194041 3194092 -68959790 - Charlie4a DNA MER1_type -1534 427 378 2269 94 0 17 chr20 3194092 3194389 -68959493 + AluSx SINE Alu 1 292 -20 1099 232 51 40 chr20 3194389 3194428 -68959454 - Charlie4a DNA MER1_type -1583 378 341 2067 129 0 26 chr20 3194428 3194731 -68959151 - AluJo SINE Alu -17 295 1 1099 232 51 40 chr20 3194731 3195014 -68958868 - Charlie4a DNA MER1_type -1620 341 49 2758 107 76 127 chr20 3197158 3197200 -68956682 - MER4A LTR ERV1 -1 663 620 2217 125 0 0 chr20 3197200 3197495 -68956387 - AluSq SINE Alu -18 295 1 2758 107 76 127 chr20 3197495 3197527 -68956355 - MER4A LTR ERV1 -44 620 588 2078 134 3 7 chr20 3197527 3197832 -68956050 + AluSq SINE Alu 1 304 -9 2758 107 76 127 chr20 3197832 3197886 -68955996 - MER4A LTR ERV1 -76 588 533 2324 94 0 27 chr20 3197886 3198184 -68955698 - AluSg SINE Alu -20 290 1 2758 107 76 127 chr20 3198184 3198752 -68955130 - MER4A LTR ERV1 -131 533 1 509 257 42 0 chr20 3199056 3199200 -68954682 + L1ME3A LINE L1 5994 6143 -27 737 211 51 6 chr20 3199206 3199381 -68954501 - MER2 DNA MER2_type 0 345 163 1959 141 10 16 chr20 3199381 3199685 -68954197 - AluSx SINE Alu -10 302 1 1751 147 26 46 chr20 3200290 3200596 -68953286 + AluSx SINE Alu 1 300 -12 237 289 72 77 chr20 3200669 3200863 -68953019 - MLT1J2 LTR MaLR -4 446 254 1100 150 0 0 chr20 3200972 3201132 -68952750 + AluSp SINE Alu 137 296 -17 266 311 14 0 chr20 3201152 3201226 -68952656 - MLT1J2 LTR MaLR -309 141 67 2236 77 0 119 chr20 3201232 3201584 -68952298 - AluSx SINE Alu -1 311 2 1133 224 148 84 chr20 3201610 3202110 -68951772 + MLT1H LTR MaLR 1 532 -17 2433 84 0 6 chr20 3202692 3203003 -68950879 - AluY SINE Alu -2 309 1 335 326 158 9 chr20 3203098 3203319 -68950563 + L1MEc LINE L1 38 291 -6105 1804 219 60 9 chr20 3203370 3203922 -68949960 + L1M4 LINE L1 4216 4795 -1351 820 210 0 56 chr20 3203903 3204098 -68949784 + AluJo SINE Alu 117 300 -12 * 240 200 0 0 chr20 3204098 3204143 -68949739 + L1M4 LINE L1 4800 4844 -1302 1361 127 104 0 chr20 3204143 3204363 -68949519 - AluSx SINE Alu -69 243 1 32 0 0 0 chr20 3204412 3204444 -68949438 + AT_rich Low_complexity Low_complexity 1 32 0 283 324 6 40 chr20 3205317 3205490 -68948392 + G-rich Low_complexity Low_complexity 3 169 0 233 243 66 22 chr20 3206058 3206194 -68947688 + (TCTCTG)n Simple_repeat Simple_repeat 2 143 0 22 56 0 0 chr20 3206849 3206885 -68946997 + GC_rich Low_complexity Low_complexity 1 36 0 257 111 0 0 chr20 3207784 3207820 -68946062 + tRNA-Arg-AGA tRNA tRNA 1 36 -40 489 321 21 26 chr20 3209978 3210171 -68943711 + MIR SINE MIR 24 215 -47 484 194 194 0 chr20 3210171 3210269 -68943613 + AluJo/FLAM SINE Alu 2 118 -184 2312 90 0 3 chr20 3210269 3210570 -68943312 - AluSx SINE Alu -12 300 1 28 35 0 35 chr20 3210577 3210602 -68943280 + AT_rich Low_complexity Low_complexity 1 25 -30 2004 114 7 7 chr20 3210602 3210891 -68942991 - AluSg SINE Alu -21 289 1 28 35 0 35 chr20 3210891 3210922 -68942960 + AT_rich Low_complexity Low_complexity 25 55 0 1651 155 54 0 chr20 3210934 3211211 -68942671 + AluJb SINE Alu 1 292 -20 2356 56 0 30 chr20 3211237 3211541 -68942341 + AluY SINE Alu 1 295 -16 2280 101 0 0 chr20 3211595 3211901 -68941981 - AluSq SINE Alu -7 306 1 187 355 91 21 chr20 3212298 3212484 -68941398 + L2 LINE L2 1175 1373 -1941 399 300 108 31 chr20 3212498 3212721 -68941161 - HAL1 LINE L1 -245 2262 2023 297 0 0 0 chr20 3212735 3212768 -68941114 + (TTTTTG)n Simple_repeat Simple_repeat 2 34 0 1539 271 72 35 chr20 3212811 3212914 -68940968 + L2 LINE L2 1824 1922 -1392 2414 74 0 6 chr20 3212914 3213226 -68940656 + AluSg SINE Alu 1 310 0 1539 271 72 35 chr20 3213226 3213295 -68940587 + L2 LINE L2 1922 1987 -1327 2487 53 0 0 chr20 3213295 3213598 -68940284 - AluY SINE Alu -8 303 1 1539 271 72 35 chr20 3213598 3214062 -68939820 + L2 LINE L2 1987 2485 -829 383 320 138 52 chr20 3214101 3214463 -68939419 + L2 LINE L2 2920 3312 -1 214 250 33 0 chr20 3214465 3214525 -68939357 + MIR SINE MIR 43 104 -104 892 149 0 8 chr20 3214849 3215023 -68938859 - FLAM_C SINE Alu 0 173 1 1880 135 36 7 chr20 3215059 3215362 -68938520 - AluJb SINE Alu 0 312 1 1714 92 0 0 chr20 3215424 3215652 -68938230 - AluSq SINE Alu -80 233 6 2245 75 0 14 chr20 3215956 3216249 -68937633 + AluSg SINE Alu 1 289 -21 2454 62 0 0 chr20 3217532 3217837 -68936045 + AluSq SINE Alu 1 305 -8 806 204 63 45 chr20 3217841 3218062 -68935820 - MIR SINE MIR -30 232 8 1644 143 6 117 chr20 3218081 3218439 -68935443 + 7SLRNA srpRNA srpRNA 1 318 -2 858 215 0 0 chr20 3218441 3218604 -68935278 + AluJo/FRAM SINE Alu 140 302 0 223 304 24 56 chr20 3219079 3219204 -68934678 - MIR SINE MIR -64 144 24 193 244 171 0 chr20 3219301 3219424 -68934458 + L2 LINE L2 2715 2858 -456 2018 136 3 3 chr20 3219512 3219813 -68934069 - AluSx SINE Alu -11 301 1 1809 151 3 10 chr20 3219907 3220205 -68933677 - AluSx SINE Alu -1 311 16 1610 173 21 21 chr20 3220211 3220500 -68933382 - AluJo SINE Alu -22 290 2 861 142 122 146 chr20 3220613 3220756 -68933126 - AluJo SINE Alu -6 306 161 2168 82 27 0 chr20 3220756 3221048 -68932834 - AluSp SINE Alu -13 300 1 2151 85 44 0 chr20 3221056 3221350 -68932532 - AluSg SINE Alu -3 307 1 2346 73 0 7 chr20 3221359 3221659 -68932223 - AluY SINE Alu -13 298 1 861 142 122 146 chr20 3221659 3221743 -68932139 - AluJo SINE Alu -166 146 66 2029 147 0 0 chr20 3221931 3222238 -68931644 + AluSx SINE Alu 2 308 -4 408 293 78 29 chr20 3222393 3222598 -68931284 - ERVL LTR ERVL -3157 2607 2393 1665 147 43 14 chr20 3222686 3222809 -68931073 + AluSq SINE Alu 14 132 -181 1947 123 45 0 chr20 3222809 3223101 -68930781 + AluY SINE Alu 1 305 -6 1665 147 43 14 chr20 3223101 3223256 -68930626 + AluSq SINE Alu 132 300 -13 2167 118 3 0 chr20 3223290 3223595 -68930287 - AluSx SINE Alu -6 306 1 962 159 0 25 chr20 3223595 3223758 -68930124 - AluJb SINE Alu -12 300 142 2074 91 0 14 chr20 3223765 3224051 -68929831 - AluSp SINE Alu -14 299 18 331 332 61 37 chr20 3224062 3224276 -68929606 - LTR16A1 LTR ERVL -235 222 4 1574 150 117 0 chr20 3224511 3224777 -68929105 - AluJo SINE Alu -15 297 1 1280 262 138 27 chr20 3225174 3225458 -68928424 - MLT1G LTR MaLR 0 590 339 2008 99 58 0 chr20 3225458 3225750 -68928132 - AluSq SINE Alu -4 309 1 1280 262 138 27 chr20 3225750 3225988 -68927894 - MLT1G LTR MaLR -251 339 10 216 250 73 0 chr20 3227386 3227454 -68926428 + MIR SINE MIR 177 249 -13 1108 246 62 0 chr20 3227695 3228004 -68925878 - L1MC/D LINE L1 -2153 5655 5328 237 119 0 0 chr20 3228112 3228154 -68925728 - AluJb SINE Alu -5 297 256 713 58 11 0 chr20 3228154 3228241 -68925641 - AluSq/x SINE Alu -193 119 32 1640 151 0 0 chr20 3228241 3228493 -68925389 - AluJb SINE Alu -60 252 1 2156 100 3 0 chr20 3228566 3228866 -68925016 - AluSx SINE Alu -11 301 1 248 308 105 15 chr20 3228961 3229094 -68924788 - L1MC/D LINE L1 -1217 4929 4785 2126 88 13 29 chr20 3229178 3229485 -68924397 - AluSq SINE Alu -11 302 1 424 181 0 0 chr20 3230021 3230093 -68923789 + MER3 DNA MER1_type 1 72 -137 538 184 18 0 chr20 3230100 3230214 -68923668 + Ricksha DNA DNA 8 123 -3123 354 155 0 48 chr20 3230198 3230282 -68923600 - Ricksha DNA DNA -1463 1783 1704 * 686 120 0 26 chr20 3230261 3230378 -68923504 - Ricksha DNA DNA -3131 115 2 653 193 89 0 chr20 3230378 3230513 -68923369 + MER3 DNA MER1_type 63 209 0 2227 101 0 0 chr20 3232022 3232318 -68921564 - AluSx SINE Alu -16 296 1 218 232 0 36 chr20 3232499 3232555 -68921327 + L3 LINE CR1 441 494 -1083 1838 144 45 0 chr20 3232574 3232865 -68921017 + AluJo SINE Alu 1 304 -8 919 114 0 0 chr20 3234636 3234767 -68919115 + FLAM_C SINE Alu 11 141 -2 239 327 215 5 chr20 3235271 3235795 -68918087 + L2 LINE L2 2624 3267 -5 243 217 0 0 chr20 3236034 3236094 -68917788 + GA-rich Low_complexity Low_complexity 1 60 0 2116 96 0 39 chr20 3236582 3236894 -68916988 + AluSx SINE Alu 1 300 -12 1958 110 0 73 chr20 3236902 3237230 -68916652 + AluSx SINE Alu 1 304 -8 249 349 146 29 chr20 3237249 3237764 -68916118 - L2 LINE L2 -470 2844 2208 2190 120 0 0 chr20 3237764 3238065 -68915817 + AluSq SINE Alu 3 303 -10 249 349 146 29 chr20 3238065 3238315 -68915567 - L2 LINE L2 -1106 2208 1989 2233 87 3 3 chr20 3238578 3238888 -68914994 + AluSg SINE Alu 1 310 0 2077 80 27 23 chr20 3239664 3239965 -68913917 - AluSc SINE Alu -7 302 1 2180 121 0 0 chr20 3240724 3241022 -68912860 + AluSx SINE Alu 1 298 -14 369 0 0 0 chr20 3241198 3241239 -68912643 + (CA)n Simple_repeat Simple_repeat 1 41 0 1828 148 3 3 chr20 3241312 3241617 -68912265 + AluSx SINE Alu 1 305 -7 2294 97 0 0 chr20 3241620 3241929 -68911953 + AluSx SINE Alu 1 309 -3 823 178 74 18 chr20 3241929 3242092 -68911790 + AluSg/x SINE Alu 132 303 -7 1923 149 3 0 chr20 3242101 3242397 -68911485 + AluSx SINE Alu 1 297 -15 2366 66 0 7 chr20 3242399 3242700 -68911182 + AluY SINE Alu 1 299 -12 1022 184 0 0 chr20 3242700 3242874 -68911008 + AluSg/x SINE Alu 132 305 -5 1387 211 88 76 chr20 3243007 3243452 -68910430 + MLT1E LTR MaLR 117 592 -1 2084 117 3 3 chr20 3243482 3243780 -68910102 + AluSx SINE Alu 1 298 -14 2096 101 20 3 chr20 3243982 3244278 -68909604 + AluSc SINE Alu 1 301 -8 2231 94 7 0 chr20 3244278 3244574 -68909308 + AluY SINE Alu 1 299 -12 681 162 15 66 chr20 3246713 3246849 -68907033 + FLAM_A SINE Alu 1 129 -4 1588 155 23 58 chr20 3247816 3248125 -68905757 + AluJo SINE Alu 1 298 -14 6076 105 74 35 chr20 3248126 3250439 -68903443 + SVA Other Other 30 1386 0 433 209 0 18 chr20 3250443 3250613 -68903269 + GA-rich Low_complexity Low_complexity 1 166 0 2356 91 0 0 chr20 3250664 3250973 -68902909 + AluSq SINE Alu 1 309 -4 1302 229 85 21 chr20 3251227 3251691 -68902191 + MER20B DNA MER1_type 111 648 -135 1809 173 7 3 chr20 3252490 3252797 -68901085 + AluJo SINE Alu 1 308 -4 22 0 0 0 chr20 3253780 3253802 -68900080 + AT_rich Low_complexity Low_complexity 1 22 0 1679 151 47 25 chr20 3253859 3254137 -68899745 + AluJo SINE Alu 2 336 0 418 39 0 0 chr20 3254137 3254188 -68899694 + (TAAA)n Simple_repeat Simple_repeat 2 180 0 1037 201 6 0 chr20 3254245 3254419 -68899463 - FAM SINE Alu 0 175 1 909 296 132 46 chr20 3254543 3254860 -68899022 - L1M4 LINE L1 -1751 4395 4107 2295 111 3 0 chr20 3254860 3255157 -68898725 + AluSg SINE Alu 1 298 -12 909 296 132 46 chr20 3255157 3255444 -68898438 - L1M4 LINE L1 -2039 4107 3739 190 278 167 0 chr20 3255463 3255517 -68898365 - L2 LINE L2 -17 3255 3193 644 93 70 195 chr20 3255525 3255637 -68898245 + L1MC2 LINE L1 6036 6160 -184 2336 99 3 0 chr20 3255637 3255940 -68897942 + AluSx SINE Alu 1 304 -8 2077 125 0 3 chr20 3255940 3256254 -68897628 + AluSx SINE Alu 3 312 0 644 93 70 195 chr20 3256254 3256355 -68897527 + L1MC2 LINE L1 6158 6223 -121 226 154 19 0 chr20 3256365 3256417 -68897465 + L1MC2 LINE L1 6282 6334 -10 2158 115 7 3 chr20 3256452 3256748 -68897134 + AluSx SINE Alu 6 302 -10 826 157 22 8 chr20 3256749 3256883 -68896999 + AluJo SINE Alu 1 136 -176 252 235 73 0 chr20 3257486 3257554 -68896328 - L1MC4 LINE L1 -41 8001 7929 1810 140 0 56 chr20 3257646 3257967 -68895915 - AluJb SINE Alu -9 303 1 567 276 104 37 chr20 3258018 3258286 -68895596 - L1ME4a LINE L1 -158 5963 5678 770 114 0 0 chr20 3258383 3258488 -68895394 + AluSg/x SINE Alu 198 302 -10 2371 76 3 20 chr20 3258488 3258790 -68895092 + AluSq SINE Alu 1 297 -16 24 0 0 0 chr20 3259048 3259072 -68894810 + AT_rich Low_complexity Low_complexity 1 24 0 671 195 98 102 chr20 3259467 3259723 -68894159 - MER112 DNA MER1_type -1 255 1 263 224 0 40 chr20 3259729 3259805 -68894077 + L1MD2 LINE L1 6180 6252 -107 481 111 0 0 chr20 3259805 3259868 -68894014 + AluS SINE Alu 1 63 -255 225 204 0 0 chr20 3260117 3260161 -68893721 + T-rich Low_complexity Low_complexity 1 44 0 2296 122 0 3 chr20 3260254 3260565 -68893317 - AluSx SINE Alu -2 310 1 2289 104 0 0 chr20 3260577 3260865 -68893017 - AluY SINE Alu -23 288 1 1980 143 11 0 chr20 3260869 3261155 -68892727 - AluSx SINE Alu -23 289 1 999 224 102 14 chr20 3261181 3261260 -68892622 - L1MD2 LINE L1 -8 6351 6280 1748 82 55 0 chr20 3261260 3261479 -68892403 - AluSq SINE Alu -82 231 1 999 224 102 14 chr20 3261479 3261694 -68892188 - L1MD2 LINE L1 -79 6280 6031 2140 120 7 13 chr20 3261901 3262201 -68891681 + AluSx SINE Alu 1 298 -14 442 267 99 0 chr20 3262499 3262600 -68891282 + MER81 DNA DNA 3 113 -1 2102 103 0 75 chr20 3263272 3263624 -68890258 - AluSq SINE Alu 0 313 1 2140 134 0 0 chr20 3263626 3263918 -68889964 - AluSg SINE Alu -18 292 1 2426 97 0 22 chr20 3263918 3264237 -68889645 - AluSx SINE Alu 0 312 1 1094 143 6 6 chr20 3264621 3264796 -68889086 - L1PA16 LINE L1 -1 6165 5991 2430 99 0 0 chr20 3264827 3265129 -68888753 - AluSx SINE Alu -10 302 1 241 178 22 144 chr20 3265245 3265279 -68888603 + L1M4 LINE L1 3959 3996 -2150 2286 101 13 7 chr20 3265279 3265585 -68888297 + AluSp SINE Alu 4 311 -2 241 178 22 144 chr20 3265585 3265640 -68888242 + L1M4 LINE L1 3996 4037 -2109 1732 166 7 7 chr20 3265641 3265918 -68887964 + AluJo SINE Alu 1 277 -35 240 35 0 0 chr20 3265918 3265947 -68887935 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 840 143 14 14 chr20 3265950 3266090 -68887792 + AluJb SINE Alu 165 304 -8 2166 105 0 23 chr20 3266100 3266229 -68887653 + AluSx SINE Alu 11 141 -171 2246 118 0 10 chr20 3266229 3266534 -68887348 + AluSx SINE Alu 1 302 -10 2166 105 0 23 chr20 3266534 3266708 -68887174 + AluSx SINE Alu 141 307 -5 2948 171 85 154 chr20 3266718 3267008 -68886874 + L1M4 LINE L1 4033 4341 -1805 2000 136 27 13 chr20 3267008 3267309 -68886573 - AluSx SINE Alu -4 308 4 2948 171 85 154 chr20 3267309 3267428 -68886454 + L1M4 LINE L1 4341 4467 -1679 2302 82 7 3 chr20 3267428 3267720 -68886162 + AluSg1 SINE Alu 5 297 -12 1168 153 6 0 chr20 3267720 3267897 -68885985 + AluJo/FRAM SINE Alu 134 311 -1 2948 171 85 154 chr20 3267897 3268609 -68885273 + L1M4 LINE L1 4465 5242 -904 1505 176 85 4 chr20 3269071 3269343 -68884539 - AluJb SINE Alu -18 294 1 1835 179 13 0 chr20 3269343 3269645 -68884237 - AluJb SINE Alu -5 307 2 2156 125 0 0 chr20 3269674 3269970 -68883912 + AluSx SINE Alu 1 296 -16 2284 110 3 25 chr20 3269970 3270289 -68883593 + AluSx SINE Alu 1 312 0 2223 113 0 7 chr20 3273645 3273945 -68879937 + AluSx SINE Alu 1 298 -14 1373 183 97 25 chr20 3274796 3274958 -68878924 - AluJb SINE Alu -13 299 150 285 51 0 0 chr20 3274958 3274997 -68878885 + (TG)n Simple_repeat Simple_repeat 1 39 0 1373 183 97 25 chr20 3274997 3275113 -68878769 - AluJb SINE Alu -162 150 1 929 246 42 0 chr20 3275159 3275374 -68878508 + MER58A DNA MER1_type 1 224 0 668 137 11 0 chr20 3275429 3275524 -68878358 + FLAM_C SINE Alu 13 108 -35 196 51 26 26 chr20 3275531 3275570 -68878312 + (TAAAA)n Simple_repeat Simple_repeat 2 40 0 2290 107 13 7 chr20 3275733 3276043 -68877839 + AluSx SINE Alu 1 312 0 2067 98 0 73 chr20 3276109 3276424 -68877458 + AluSg SINE Alu 1 292 -18 2137 123 14 0 chr20 3276536 3276828 -68877054 + AluSx SINE Alu 1 296 -16 28 48 0 0 chr20 3277029 3277071 -68876811 + AT_rich Low_complexity Low_complexity 1 42 0 477 260 81 60 chr20 3277233 3277468 -68876414 - MIR SINE MIR -3 259 20 322 200 0 17 chr20 3277580 3277640 -68876242 + MIR3 SINE MIR 145 203 -5 1387 151 17 25 chr20 3277657 3277895 -68875987 - MER46A DNA MER2_type 0 236 1 758 236 149 65 chr20 3278022 3278310 -68875572 + HAL1 LINE L1 1745 2008 -499 1538 221 30 3 chr20 3278310 3278608 -68875274 + AluJb SINE Alu 1 306 -6 758 236 149 65 chr20 3278608 3278810 -68875072 + HAL1 LINE L1 2008 2276 -231 1211 144 0 0 chr20 3278812 3278993 -68874889 + AluSg/x SINE Alu 130 310 0 967 112 0 0 chr20 3279033 3279158 -68874724 + AluSq/x SINE Alu 12 136 -177 2165 112 3 3 chr20 3279158 3279452 -68874430 + AluSq SINE Alu 1 294 -19 319 235 0 0 chr20 3279482 3279550 -68874332 + HAL1 LINE L1 2440 2507 0 2194 116 7 10 chr20 3280084 3280387 -68873495 - AluSx SINE Alu -10 302 1 740 173 16 0 chr20 3280891 3281018 -68872864 + FLAM_C SINE Alu 1 129 -4 1509 104 5 205 chr20 3281806 3282181 -68871701 - AluJb SINE Alu -12 300 1 2319 60 0 3 chr20 3282363 3282684 -68871198 - AluY SINE Alu 0 320 1 451 252 0 9 chr20 3283210 3283317 -68870565 + MER5A DNA MER1_type 9 114 -75 323 296 42 49 chr20 3283371 3283513 -68870369 - MIR SINE MIR -78 184 44 2302 64 3 74 chr20 3283976 3284302 -68869580 + AluSx SINE Alu 3 305 -7 816 138 0 62 chr20 3284392 3284537 -68869345 - FLAM_C SINE Alu -7 136 1 1200 156 0 0 chr20 3284579 3284746 -68869136 - AluJb SINE Alu -16 296 130 1509 105 9 19 chr20 3284790 3285000 -68868882 + AluSg/x SINE Alu 72 279 -31 353 147 118 20 chr20 3285704 3285806 -68868076 + MLT1L LTR MaLR 168 279 -336 31 0 0 0 chr20 3286604 3286635 -68867247 + AT_rich Low_complexity Low_complexity 1 31 0 301 227 184 120 chr20 3289598 3289972 -68863910 + L1M2 LINE L1 654 1051 -5798 288 0 0 0 chr20 3291341 3291373 -68862509 + (CAGCT)n Simple_repeat Simple_repeat 3 34 0 239 322 20 26 chr20 3291761 3291913 -68861969 + MIR SINE MIR 24 174 -88 378 217 217 0 chr20 3293009 3293152 -68860730 - MER96 DNA MER1_type? -1 174 1 2120 136 3 7 chr20 3293507 3293815 -68860067 + AluSx SINE Alu 1 307 -5 2306 87 13 3 chr20 3294119 3294417 -68859465 + AluSx SINE Alu 2 302 -10 2149 126 0 10 chr20 3294423 3294732 -68859150 + AluSx SINE Alu 6 311 -1 1161 97 30 18 chr20 3295427 3295592 -68858290 + AluSg/x SINE Alu 135 301 -11 216 365 0 0 chr20 3296014 3296110 -68857772 + L2 LINE L2 2651 2746 -568 215 326 90 0 chr20 3296127 3296216 -68857666 + MIR SINE MIR 16 112 -96 25 65 0 0 chr20 3297440 3297486 -68856396 + GC_rich Low_complexity Low_complexity 1 46 0 326 249 216 25 chr20 3298868 3299109 -68854773 - HAL1b LINE L1 -626 722 436 2074 91 43 11 chr20 3299787 3300063 -68853819 - AluSg SINE Alu 0 310 26 189 0 0 0 chr20 3300108 3300129 -68853753 + (TTTTG)n Simple_repeat Simple_repeat 4 24 0 2039 121 17 3 chr20 3300174 3300464 -68853418 - AluSx SINE Alu -18 294 1 1794 171 3 20 chr20 3300569 3300705 -68853177 + AluJb SINE Alu 1 138 -174 2303 125 0 6 chr20 3300705 3301018 -68852864 + AluSx SINE Alu 1 311 -1 1794 171 3 20 chr20 3301018 3301186 -68852696 + AluJb SINE Alu 138 300 -12 250 320 0 0 chr20 3301284 3301381 -68852501 + L1 LINE L1 3609 3705 -2441 2028 150 3 7 chr20 3301603 3301910 -68851972 + AluSx SINE Alu 1 306 -6 244 258 0 0 chr20 3301920 3301982 -68851900 - L1MC/D LINE L1 -2254 5531 5470 2236 194 48 7 chr20 3301982 3302445 -68851437 - LTR53 LTR ERVL 0 519 38 1902 151 3 22 chr20 3302455 3302773 -68851109 - AluSq SINE Alu -1 312 1 548 263 74 47 chr20 3302786 3303122 -68850760 + L1MC4a LINE L1 5539 5816 -305 23 33 0 0 chr20 3303162 3303192 -68850690 + AT_rich Low_complexity Low_complexity 1 30 0 2302 110 0 19 chr20 3303225 3303534 -68850348 - AluSx SINE Alu -9 303 1 1266 157 52 30 chr20 3303686 3303916 -68849966 - AluJo SINE Alu -69 243 9 35 0 0 0 chr20 3304017 3304052 -68849830 + AT_rich Low_complexity Low_complexity 1 35 0 1788 192 57 65 chr20 3304073 3304578 -68849304 + MLT1D LTR MaLR 5 505 0 2275 94 11 0 chr20 3304676 3304962 -68848920 + AluSx SINE Alu 1 289 -23 606 28 0 0 chr20 3304963 3305035 -68848847 + (TAGA)n Simple_repeat Simple_repeat 2 73 0 21 36 0 0 chr20 3305035 3305063 -68848819 + AT_rich Low_complexity Low_complexity 1 28 0 2233 102 3 0 chr20 3305492 3305795 -68848087 - AluSx SINE Alu -8 304 1 2172 97 0 34 chr20 3305850 3306198 -68847684 + AluSx SINE Alu 1 312 0 1939 123 10 10 chr20 3306486 3306778 -68847104 - AluJb SINE Alu -17 295 4 1242 118 14 59 chr20 3306790 3306827 -68847055 + AluSg/x SINE Alu 98 135 -177 2138 110 0 7 chr20 3306827 3307126 -68846756 + AluSp SINE Alu 1 297 -16 1242 118 14 59 chr20 3307126 3307309 -68846573 + AluSg/x SINE Alu 135 308 -4 485 304 149 0 chr20 3307914 3308128 -68845754 - MER112 DNA MER1_type -9 251 6 2419 50 0 3 chr20 3308635 3308932 -68844950 + AluY SINE Alu 1 296 -15 1719 151 7 43 chr20 3309104 3309409 -68844473 + AluJo SINE Alu 1 294 -18 1799 162 3 3 chr20 3309632 3309928 -68843954 + AluJb SINE Alu 1 296 -16 2337 89 0 6 chr20 3309928 3310241 -68843641 + AluY SINE Alu 1 311 0 304 114 0 0 chr20 3310576 3310620 -68843262 + Alu SINE Alu 1 44 -255 1543 76 22 31 chr20 3310620 3310843 -68843039 + AluSg/x SINE Alu 90 310 0 2245 88 7 3 chr20 3310891 3311198 -68842684 + AluSg SINE Alu 1 308 -2 2396 61 0 0 chr20 3311200 3311532 -68842350 + AluY SINE Alu 1 311 0 1938 134 0 3 chr20 3311662 3311952 -68841930 + AluSx SINE Alu 1 289 -23 1944 123 14 0 chr20 3311984 3312277 -68841605 + AluSx SINE Alu 1 297 -15 2103 81 42 0 chr20 3312364 3312648 -68841234 + AluSx SINE Alu 1 296 -16 533 186 143 56 chr20 3313107 3313268 -68840614 - MER5B DNA MER1_type -3 175 1 255 31 0 0 chr20 3315883 3315915 -68837967 + (CA)n Simple_repeat Simple_repeat 2 33 0 321 283 83 0 chr20 3316189 3316309 -68837573 - L2 LINE L2 -21 3251 3122 482 188 0 0 chr20 3316981 3317061 -68836821 + FRAM/FAM SINE Alu 1 73 -103 2267 97 0 0 chr20 3317281 3317579 -68836303 - AluSx SINE Alu -12 300 3 210 280 236 43 chr20 3319534 3320191 -68833691 + L2 LINE L2 1706 2489 -825 2408 50 0 13 chr20 3320306 3320608 -68833274 + AluY SINE Alu 1 298 -13 1860 174 144 104 chr20 3320616 3320851 -68833031 + L1MC3 LINE L1 6784 7008 -777 2369 88 0 0 chr20 3320851 3321159 -68832723 + AluSx SINE Alu 1 308 -4 1860 174 144 104 chr20 3321159 3321236 -68832646 + L1MC3 LINE L1 7008 7081 -704 246 241 0 0 chr20 3321236 3321290 -68832592 + MLT1F1 LTR MaLR 62 115 -452 1860 174 144 104 chr20 3321290 3321558 -68832324 + L1MC3 LINE L1 7081 7447 -338 1949 134 27 0 chr20 3321558 3321850 -68832032 + AluSx SINE Alu 1 300 -12 1860 174 144 104 chr20 3321850 3321874 -68832008 + L1MC3 LINE L1 7447 7469 -316 887 119 119 25 chr20 3321877 3322036 -68831846 + FRAM SINE Alu 1 171 -5 2139 102 7 0 chr20 3322036 3322330 -68831552 + AluSc SINE Alu 1 296 -13 2329 96 3 0 chr20 3322330 3322641 -68831241 + AluSp SINE Alu 1 313 0 863 202 37 49 chr20 3322642 3322770 -68831112 + L1MC3 LINE L1 6144 6272 -1513 1624 178 0 41 chr20 3322770 3323085 -68830797 + AluJb SINE Alu 1 302 -10 863 202 37 49 chr20 3323085 3323208 -68830674 + L1MC3 LINE L1 6272 7703 -82 188 214 71 102 chr20 3323536 3323634 -68830248 + L2 LINE L2 2763 2857 -457 263 228 89 40 chr20 3323637 3323738 -68830144 + LTR16A1 LTR ERVL 332 437 -20 2325 65 0 19 chr20 3324606 3324739 -68829143 + AluY SINE Alu 1 135 -176 2209 114 0 0 chr20 3324739 3325045 -68828837 + AluY SINE Alu 1 306 -5 2325 65 0 19 chr20 3325045 3325220 -68828662 + AluY SINE Alu 135 303 -8 1002 112 0 106 chr20 3325220 3325408 -68828474 + AluY SINE Alu 133 300 -11 2291 77 0 16 chr20 3325560 3325872 -68828010 - AluY SINE Alu -4 307 1 2053 74 88 0 chr20 3325881 3326164 -68827718 - AluY SINE Alu -3 308 1 2322 45 14 3 chr20 3328771 3329058 -68824824 - AluSg SINE Alu -18 292 3 207 0 0 0 chr20 3329227 3329250 -68824632 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 186 43 0 0 chr20 3329254 3329277 -68824605 + (GGGGA)n Simple_repeat Simple_repeat 1 23 0 1682 158 37 3 chr20 3329339 3329637 -68824245 + AluJb SINE Alu 1 308 -4 2092 134 0 3 chr20 3329683 3329996 -68823886 + AluSx SINE Alu 1 312 0 2230 102 3 0 chr20 3330017 3330322 -68823560 + AluSx SINE Alu 1 306 -6 1856 151 0 43 chr20 3330322 3330459 -68823423 + AluSx SINE Alu 2 143 -169 2370 71 7 3 chr20 3330459 3330767 -68823115 + AluY SINE Alu 1 309 -2 1856 151 0 43 chr20 3330767 3330954 -68822928 + AluSx SINE Alu 143 312 0 1451 154 8 8 chr20 3330997 3331244 -68822638 - AluJb SINE Alu -8 304 58 2020 112 0 3 chr20 3331322 3331630 -68822252 + AluSx SINE Alu 1 307 0 2092 116 0 3 chr20 3331632 3331934 -68821948 + AluSg SINE Alu 8 308 -2 1850 127 14 14 chr20 3332289 3332580 -68821302 - AluSp SINE Alu -16 297 7 230 263 0 18 chr20 3332581 3332638 -68821244 - MER5A DNA MER1_type -6 183 128 186 315 22 43 chr20 3333989 3334081 -68819801 + MIR SINE MIR 118 207 -55 193 191 0 0 chr20 3388289 3388331 -68765551 - MIR SINE MIR -89 119 78 358 152 16 64 chr20 3388490 3388584 -68765298 - MIR SINE MIR -74 188 102 220 301 187 28 chr20 3389257 3389546 -68764336 - L2 LINE L2 -719 2595 2261 2275 53 3 0 chr20 3389849 3390155 -68763727 + AluY SINE Alu 1 307 0 2167 92 3 3 chr20 3390174 3390477 -68763405 + AluSg SINE Alu 1 303 -7 234 205 181 24 chr20 3390735 3390818 -68763064 - MIR SINE MIR -15 247 152 1752 165 0 3 chr20 3391289 3391592 -68762290 + AluJb SINE Alu 5 306 -6 426 278 105 23 chr20 3391651 3391784 -68762098 - MIR SINE MIR -113 149 6 2245 94 0 3 chr20 3392001 3392300 -68761582 + AluSq SINE Alu 3 300 -13 224 233 0 0 chr20 3392417 3392460 -68761422 + L2 LINE L2 3180 3222 -91 224 233 0 0 chr20 3392494 3392537 -68761345 + L2 LINE L2 3180 3222 -91 221 219 0 0 chr20 3392571 3392612 -68761270 + L2 LINE L2 3180 3220 -93 240 209 0 0 chr20 3392648 3392691 -68761191 + L2 LINE L2 3180 3222 -91 240 209 0 0 chr20 3392725 3392768 -68761114 + L2 LINE L2 3180 3222 -91 224 233 0 0 chr20 3392802 3392845 -68761037 + L2 LINE L2 3180 3222 -91 240 209 0 0 chr20 3392879 3392922 -68760960 + L2 LINE L2 3180 3222 -91 224 233 0 0 chr20 3392956 3392999 -68760883 + L2 LINE L2 3180 3222 -91 307 181 25 188 chr20 3393033 3393193 -68760689 + L2 LINE L2 3180 3313 0 185 319 104 39 chr20 3393211 3393471 -68760411 + L2 LINE L2 2196 2472 -842 3266 72 54 39 chr20 3393636 3394119 -68759763 + L1PA7 LINE L1 5664 6153 -1 1381 175 130 0 chr20 3394344 3394613 -68759269 - AluJo SINE Alu -8 304 1 391 354 52 68 chr20 3394647 3395011 -68758871 - L2 LINE L2 -4 3268 2911 1800 212 67 25 chr20 3395011 3395459 -68758423 - MLT1C LTR MaLR 0 467 1 391 354 52 68 chr20 3395459 3395535 -68758347 - L2 LINE L2 -361 2911 2835 419 301 93 82 chr20 3395598 3396027 -68757855 + MLT1K LTR MaLR 155 588 0 242 128 0 0 chr20 3396058 3396097 -68757785 - MLT1A2 LTR MaLR -4 370 332 1459 181 14 31 chr20 3396778 3397066 -68756816 - AluJo SINE Alu -27 285 3 201 74 0 0 chr20 3397209 3397236 -68756646 + (T)n Simple_repeat Simple_repeat 1 27 0 25 112 0 0 chr20 3397481 3397597 -68756285 + AT_rich Low_complexity Low_complexity 1 116 0 308 224 58 71 chr20 3398629 3398775 -68755107 - L1ME LINE L1 -311 5842 5684 1614 187 3 3 chr20 3398775 3399069 -68754813 - AluJb SINE Alu -18 294 1 308 224 58 71 chr20 3399069 3399126 -68754756 - L1ME LINE L1 -469 5684 5628 245 239 65 84 chr20 3399126 3399389 -68754493 - Charlie2 DNA MER1_type -1 2861 2604 1739 182 3 3 chr20 3399389 3399696 -68754186 + AluJo SINE Alu 1 307 -5 560 329 32 16 chr20 3399719 3399968 -68753914 - L1ME LINE L1 -1008 5121 4869 390 280 51 81 chr20 3400050 3400286 -68753596 - L1ME LINE L1 -1517 4612 4384 351 0 0 0 chr20 3400332 3400371 -68753511 + (TTA)n Simple_repeat Simple_repeat 2 40 0 460 269 117 59 chr20 3400577 3400833 -68753049 - L1ME LINE L1 -1820 4309 4039 370 260 26 52 chr20 3400867 3401033 -68752849 - L1ME LINE L1 -2248 3881 3719 2298 97 0 0 chr20 3401033 3401342 -68752540 - AluSg SINE Alu -1 309 1 370 260 26 52 chr20 3401342 3401367 -68752515 - L1ME LINE L1 -2410 3719 3695 324 291 66 18 chr20 3401384 3401601 -68752281 - L1ME LINE L1 -875 1615 1412 384 196 49 125 chr20 3401601 3401785 -68752097 - L1MC5 LINE L1 -48 7913 7744 1457 164 92 0 chr20 3401818 3402099 -68751783 - AluSx SINE Alu 0 312 6 1333 281 107 60 chr20 3402235 3402670 -68751212 - L1ME LINE L1 -4862 1257 844 1794 101 8 0 chr20 3402670 3402918 -68750964 - AluSg1 SINE Alu -24 285 36 1333 281 107 60 chr20 3402918 3403605 -68750277 - L1ME LINE L1 -5275 844 82 1475 260 62 61 chr20 3403620 3404369 -68749513 - L1M4 LINE L1 -984 5162 4409 2091 91 0 0 chr20 3404369 3404672 -68749210 - AluSx SINE Alu 0 314 12 1475 260 62 61 chr20 3404672 3404725 -68749157 - L1M4 LINE L1 -1737 4409 4358 697 271 160 46 chr20 3406575 3407074 -68746808 + L2 LINE L2 1698 2253 -1061 219 304 108 10 chr20 3407113 3407215 -68746667 + L2 LINE L2 2437 2548 -766 324 0 0 0 chr20 3407591 3407627 -68746255 + (TG)n Simple_repeat Simple_repeat 2 37 0 282 95 0 0 chr20 3408235 3408277 -68745605 + (GA)n Simple_repeat Simple_repeat 2 43 0 213 39 0 0 chr20 3408294 3408320 -68745562 + (CA)n Simple_repeat Simple_repeat 1 26 0 286 125 57 40 chr20 3408326 3408502 -68745380 + (TA)n Simple_repeat Simple_repeat 1 179 0 23 0 0 0 chr20 3408502 3408525 -68745357 + AT_rich Low_complexity Low_complexity 1 23 0 246 32 0 0 chr20 3408541 3408572 -68745310 + (TG)n Simple_repeat Simple_repeat 2 32 0 1622 179 3 27 chr20 3408586 3408883 -68744999 - AluJo SINE Alu -22 290 1 880 116 8 0 chr20 3408884 3409005 -68744877 - AluJo SINE Alu -178 134 13 184 330 135 69 chr20 3409364 3409743 -68744139 - L2 LINE L2 -50 3222 2819 192 322 58 58 chr20 3409784 3409958 -68743924 - L2 LINE L2 -570 2744 2571 262 321 28 9 chr20 3410127 3410233 -68743649 - L2 LINE L2 -1026 2288 2181 23 0 0 0 chr20 3410482 3410505 -68743377 + AT_rich Low_complexity Low_complexity 1 23 0 284 286 150 41 chr20 3410726 3410873 -68743009 - MER5B DNA MER1_type -15 163 1 559 249 128 48 chr20 3411071 3411484 -68742398 + L1MC4a LINE L1 5749 6194 -1614 14504 23 0 5 chr20 3411507 3413336 -68740546 - L1PA3 LINE L1 -2928 3218 1399 18095 28 1 2 chr20 3413336 3416268 -68737614 + L1PA3 LINE L1 3217 6151 -4 35 0 0 0 chr20 3416268 3416303 -68737579 + AT_rich Low_complexity Low_complexity 1 35 0 630 310 35 22 chr20 3416613 3416929 -68736953 + L1MC4a LINE L1 6495 6814 -994 394 291 40 84 chr20 3416943 3417194 -68736688 + L1MEd LINE L1 348 587 -5829 3363 211 73 70 chr20 3417682 3419817 -68734065 + L1MDb LINE L1 7 2009 -4397 1976 123 3 31 chr20 3419817 3420162 -68733720 + AluSq SINE Alu 1 337 0 3363 211 73 70 chr20 3420162 3420436 -68733446 + L1MDb LINE L1 2009 2281 -4125 2746 193 32 2 chr20 3420436 3420965 -68732917 + MLT2B3 LTR ERVL 2 546 -8 851 207 132 3 chr20 3420966 3421318 -68732564 + L1MDb LINE L1 2273 2672 -3734 1352 191 21 82 chr20 3421331 3421722 -68732160 + L1MD2 LINE L1 5971 6358 -1 359 140 0 110 chr20 3421721 3421764 -68732118 + L1MD3 LINE L1 7698 7725 -270 * 2186 124 0 3 chr20 3421764 3422070 -68731812 + AluSx SINE Alu 1 305 -7 359 140 0 110 chr20 3422070 3422126 -68731756 + L1MD3 LINE L1 7725 7786 -209 186 43 0 0 chr20 3422126 3422149 -68731733 + (CA)n Simple_repeat Simple_repeat 2 24 0 327 289 75 64 chr20 3422151 3422431 -68731451 + L1MEd LINE L1 1084 1366 -5050 495 53 0 160 chr20 3422432 3422526 -68731356 + MADE1 DNA Mariner 2 80 0 2277 81 7 17 chr20 3422547 3422845 -68731037 + AluSg1 SINE Alu 1 295 -14 236 35 0 0 chr20 3422857 3422886 -68730996 - MADE1 DNA Mariner -43 37 9 263 292 44 15 chr20 3422922 3423059 -68730823 + L1MEd LINE L1 1252 1392 -5034 2136 62 52 72 chr20 3423117 3423423 -68730459 - AluSc SINE Alu -7 302 3 766 129 9 9 chr20 3423489 3423605 -68730277 + FLAM_C SINE Alu 1 116 -27 22 35 0 0 chr20 3423607 3423636 -68730246 + AT_rich Low_complexity Low_complexity 1 29 0 764 257 119 63 chr20 3423636 3423755 -68730127 + L1MEd LINE L1 1511 1622 -4804 923 199 92 10 chr20 3423755 3423961 -68729921 - MER58A DNA MER1_type 0 224 2 764 257 119 63 chr20 3423961 3424905 -68728977 + L1MEd LINE L1 1622 2781 -3645 2119 114 0 23 chr20 3424920 3425226 -68728656 - AluSx SINE Alu -13 299 1 1303 245 62 90 chr20 3425232 3425685 -68728197 - L1MC4 LINE L1 0 8042 7623 974 228 9 9 chr20 3425685 3425909 -68727973 - MER58A DNA MER1_type 0 224 1 1303 245 62 90 chr20 3425909 3426312 -68727570 - L1MC4 LINE L1 -419 7623 7210 700 224 122 25 chr20 3426416 3426777 -68727105 + L1MEd LINE L1 3151 3546 -2880 207 0 0 0 chr20 3427508 3427531 -68726351 + (TA)n Simple_repeat Simple_repeat 2 24 0 9502 32 14 0 chr20 3427531 3429458 -68724424 - L1PA4 LINE L1 -2 6153 4211 915 74 0 0 chr20 3429463 3429584 -68724298 - L1P LINE L1 -6025 121 1 1061 259 91 37 chr20 3429639 3430100 -68723782 + L1MEd LINE L1 3764 4277 -2149 1859 164 10 0 chr20 3430100 3430399 -68723483 + AluJb SINE Alu 1 302 -10 1061 259 91 37 chr20 3430399 3430640 -68723242 + L1MEd LINE L1 4277 4504 -1922 827 278 140 105 chr20 3430661 3431796 -68722086 - L2 LINE L2 -1039 2275 1101 493 245 66 0 chr20 3431811 3431962 -68721920 - MER104 DNA Tc2 -16 164 4 240 185 15 31 chr20 3431965 3432030 -68721852 - MLT1L LTR MaLR -6 609 546 3319 56 9 0 chr20 3432146 3432578 -68721304 - L1PA7 LINE L1 -236 5918 5483 335 277 130 12 chr20 3432624 3432877 -68721005 + L1ME4a LINE L1 5813 6095 -26 1913 122 0 0 chr20 3432948 3433210 -68720672 + AluSx SINE Alu 38 299 -13 705 137 144 7 chr20 3433797 3433936 -68719946 + L1MB7 LINE L1 5864 6021 -163 525 158 50 8 chr20 3433940 3434060 -68719822 + L1MB7 LINE L1 6060 6184 0 406 222 202 30 chr20 3434091 3434294 -68719588 - L1MC5 LINE L1 -118 7843 7606 333 280 30 8 chr20 3434298 3434430 -68719452 - L1MC/D LINE L1 -1992 5816 5682 384 325 80 15 chr20 3434826 3435026 -68718856 + HAL1 LINE L1 1055 1267 -1240 736 155 8 23 chr20 3435026 3435180 -68718702 + L1PB2 LINE L1 6013 6164 0 250 275 50 17 chr20 3435246 3435366 -68718516 + HAL1 LINE L1 1516 1639 -868 2005 148 0 7 chr20 3435915 3436219 -68717663 - AluSx SINE Alu -10 302 1 229 114 91 0 chr20 3436362 3436406 -68717476 + L1MEc LINE L1 2424 2471 -3925 924 142 24 0 chr20 3436407 3436576 -68717306 + L1PA16 LINE L1 5876 6048 -118 225 121 52 52 chr20 3436578 3436636 -68717246 + L1MEc LINE L1 2954 3011 -3204 517 180 90 0 chr20 3436650 3436772 -68717110 + L1PA16 LINE L1 6034 6166 0 2056 251 34 13 chr20 3436779 3437219 -68716663 + L1M4 LINE L1 2346 2808 -3338 1545 160 21 46 chr20 3437219 3437500 -68716382 - AluJo SINE Alu -26 286 13 2056 251 34 13 chr20 3437500 3437767 -68716115 + L1M4 LINE L1 2808 3068 -3078 29644 89 13 16 chr20 3437767 3443504 -68710378 + L1PA7 LINE L1 736 6469 0 1808 242 115 38 chr20 3443471 3443511 -68710371 + L1ME2 LINE L1 5595 5631 -1018 * 2256 93 3 0 chr20 3443511 3443801 -68710081 + AluSg1 SINE Alu 1 291 -18 2090 132 84 3 chr20 3443801 3444156 -68709726 + L1PA15 LINE L1 5777 6160 -5 1808 242 115 38 chr20 3444156 3444234 -68709648 + L1ME2 LINE L1 5631 5702 -947 1846 179 3 7 chr20 3444234 3444536 -68709346 - AluJb SINE Alu -11 301 1 1808 242 115 38 chr20 3444536 3445241 -68708641 + L1ME2 LINE L1 5702 6645 -4 480 298 121 27 chr20 3445268 3445600 -68708282 + L1M4 LINE L1 2131 2493 -3653 198 80 60 0 chr20 3445640 3445690 -68708192 + (TA)n Simple_repeat Simple_repeat 1 53 0 1963 119 0 58 chr20 3445691 3446002 -68707880 - AluSg SINE Alu -17 293 1 588 288 49 18 chr20 3446649 3447070 -68706812 + L1MC4a LINE L1 5472 5904 -1904 234 0 0 0 chr20 3447220 3447246 -68706636 + (CAA)n Simple_repeat Simple_repeat 2 27 0 1188 164 4 44 chr20 3447346 3447572 -68706310 + AluJo SINE Alu 85 301 -11 508 250 190 33 chr20 3448060 3448192 -68705690 - LTR16A LTR ERVL -103 347 237 2543 51 0 0 chr20 3448192 3448484 -68705398 - AluY SINE Alu -19 292 1 508 250 190 33 chr20 3448484 3448651 -68705231 - LTR16A LTR ERVL -213 237 1 1232 283 50 6 chr20 3448767 3449128 -68704754 + MLT1J LTR MaLR 43 419 -92 224 163 0 20 chr20 3449198 3449247 -68704635 + (TA)n Simple_repeat Simple_repeat 1 48 0 568 185 8 46 chr20 3449247 3449377 -68704505 - FLAM_C SINE Alu -16 127 3 245 164 36 0 chr20 3449403 3449458 -68704424 - MLT1L LTR MaLR -414 201 145 795 301 158 12 chr20 3449504 3450066 -68703816 - L2 LINE L2 -2203 1111 468 913 207 143 45 chr20 3450111 3450377 -68703505 + AluJo SINE Alu 2 293 -19 48 60 0 0 chr20 3450556 3450639 -68703243 + AT_rich Low_complexity Low_complexity 1 83 0 351 0 0 0 chr20 3451011 3451050 -68702832 + (CA)n Simple_repeat Simple_repeat 2 40 0 2220 101 7 0 chr20 3451056 3451352 -68702530 - AluSq SINE Alu -15 298 1 4534 168 54 89 chr20 3451549 3451618 -68702264 - Charlie1 DNA MER1_type 0 2761 2691 2137 98 0 7 chr20 3451618 3451933 -68701949 - AluSx SINE Alu 0 313 1 4534 168 54 89 chr20 3451933 3452935 -68700947 - Charlie1 DNA MER1_type -70 2691 1656 3150 47 0 0 chr20 3452935 3453319 -68700563 - L1PA5 LINE L1 -1 6153 5770 4534 168 54 89 chr20 3453319 3453377 -68700505 - Charlie1 DNA MER1_type -1105 1656 1598 1391 6 0 12 chr20 3453377 3453540 -68700342 - L1PA2 LINE L1 0 6155 5995 4534 168 54 89 chr20 3453540 3453913 -68699969 - Charlie1 DNA MER1_type -1163 1598 1 411 288 61 58 chr20 3453949 3454244 -68699638 + L2 LINE L2 2369 2664 -650 341 308 221 13 chr20 3454220 3454528 -68699354 + L2 LINE L2 2809 3180 -133 * 242 292 79 63 chr20 3454589 3454904 -68698978 - L2 LINE L2 -1389 1925 1606 245 342 108 9 chr20 3455410 3455521 -68698361 + L2 LINE L2 3151 3272 0 207 257 36 67 chr20 3455902 3456048 -68697834 + MIR SINE MIR 47 186 -66 192 77 0 0 chr20 3456191 3456217 -68697665 + (TG)n Simple_repeat Simple_repeat 1 26 0 2775 7 0 0 chr20 3456499 3456799 -68697083 - AluY SINE Alu -11 300 1 2018 171 12 0 chr20 3456816 3457160 -68696722 - MER7A DNA MER2_type 0 346 1 180 275 0 0 chr20 3457696 3457736 -68696146 - MIR SINE MIR -5 257 218 402 176 0 37 chr20 3457963 3458071 -68695811 + C-rich Low_complexity Low_complexity 4 107 0 1719 136 0 43 chr20 3458081 3458361 -68695521 - AluJo SINE Alu -44 268 1 853 247 98 47 chr20 3458479 3458775 -68695107 + L2 LINE L2 3003 3313 0 2222 109 0 10 chr20 3458862 3459164 -68694718 + AluSx SINE Alu 1 299 -13 1734 159 0 66 chr20 3459173 3459506 -68694376 + AluJb SINE Alu 1 311 -1 330 302 79 7 chr20 3459719 3459858 -68694024 - L1MC/D LINE L1 -2058 5750 5602 243 0 0 0 chr20 3459919 3459946 -68693936 + (TGG)n Simple_repeat Simple_repeat 3 29 0 257 339 59 42 chr20 3459961 3460247 -68693635 + L1ME LINE L1 5339 5629 -492 26 0 0 0 chr20 3460482 3460508 -68693374 + AT_rich Low_complexity Low_complexity 1 26 0 2166 109 17 7 chr20 3460511 3460813 -68693069 + AluSq SINE Alu 5 309 -4 381 297 146 21 chr20 3461377 3461569 -68692313 - MIR SINE MIR 0 262 47 2313 100 0 3 chr20 3461812 3462113 -68691769 - AluSg SINE Alu -10 300 1 1290 199 101 38 chr20 3463653 3463741 -68690141 - MER2 DNA MER2_type -8 337 256 2285 99 3 3 chr20 3463741 3464043 -68689839 + AluSx SINE Alu 1 302 -10 1290 199 101 38 chr20 3464043 3464271 -68689611 - MER2 DNA MER2_type -89 256 1 292 231 56 28 chr20 3464802 3464910 -68688972 - L1ME4a LINE L1 -43 6078 5968 21 36 0 0 chr20 3465040 3465068 -68688814 + AT_rich Low_complexity Low_complexity 1 28 0 1573 147 0 0 chr20 3465468 3465693 -68688189 + AluSq SINE Alu 1 225 -88 904 173 0 32 chr20 3465693 3465878 -68688004 - L1P LINE L1 -1290 4856 4678 456 266 18 0 chr20 3466310 3466423 -68687459 + L2 LINE L2 769 883 -2431 1349 218 62 87 chr20 3466424 3466631 -68687251 + LTR16A1 LTR ERVL 1 212 -245 487 206 124 0 chr20 3466631 3466728 -68687154 - MER81 DNA DNA -4 110 2 1349 218 62 87 chr20 3466728 3466989 -68686893 + LTR16A1 LTR ERVL 212 457 0 204 286 91 13 chr20 3466992 3467069 -68686813 + L2 LINE L2 880 962 -2352 550 306 43 14 chr20 3467076 3467285 -68686597 + L2 LINE L2 1290 1504 -1810 575 220 61 0 chr20 3467289 3467421 -68686461 + MER3 DNA MER1_type 1 140 -69 1947 238 97 21 chr20 3467423 3467955 -68685927 + L2 LINE L2 1931 2516 -798 2016 217 127 70 chr20 3467955 3468513 -68685369 - MLT1E LTR MaLR -2 591 2 1947 238 97 21 chr20 3468513 3468586 -68685296 + L2 LINE L2 2516 2582 -732 465 350 132 20 chr20 3468824 3469463 -68684419 + L2 LINE L2 2583 3310 -3 2315 71 4 0 chr20 3469728 3470056 -68683826 - AluY SINE Alu 0 329 1 2683 19 6 10 chr20 3470413 3470725 -68683157 - AluY SINE Alu 0 311 1 1871 213 89 39 chr20 3472703 3473290 -68680592 + HAL1b LINE L1 351 966 -382 327 235 103 65 chr20 3473665 3473864 -68680018 - L1ME1 LINE L1 -276 5886 5684 480 193 67 47 chr20 3474020 3474170 -68679712 + HAL1b LINE L1 1196 1348 0 405 172 32 11 chr20 3475460 3475553 -68678329 - L1MB3 LINE L1 -2 6181 6087 2711 111 31 7 chr20 3475561 3475986 -68677896 - L1MA4 LINE L1 -282 6018 5584 2240 78 0 7 chr20 3476463 3476773 -68677109 + AluSx SINE Alu 3 310 0 24 0 0 0 chr20 3476893 3476917 -68676965 + AT_rich Low_complexity Low_complexity 1 24 0 1723 158 14 7 chr20 3477157 3477448 -68676434 - AluJo SINE Alu -19 293 1 1293 202 20 4 chr20 3479279 3479527 -68674355 - L1MB3 LINE L1 0 6183 5932 354 322 40 7 chr20 3479739 3479888 -68673994 - L2 LINE L2 -220 3052 2899 2282 88 0 0 chr20 3480206 3480489 -68673393 + AluY SINE Alu 1 283 -28 1939 100 9 94 chr20 3480908 3481249 -68672633 + AluSx SINE Alu 1 312 0 2163 110 7 10 chr20 3482044 3482353 -68671529 + AluSx SINE Alu 1 308 -4 237 239 90 45 chr20 3482687 3482754 -68671128 + L2 LINE L2 3185 3254 -18 2369 75 7 7 chr20 3483431 3483736 -68670146 + AluY SINE Alu 1 305 -6 1111 126 0 6 chr20 3483784 3483943 -68669939 + FRAM SINE Alu 1 154 -22 3336 203 19 13 chr20 3483957 3484584 -68669298 + MER82 DNA MER2_type 1 631 -22 2747 125 101 9 chr20 3484601 3485056 -68668826 - Tigger3(Golem) DNA MER2_type -2 3027 2531 274 240 0 0 chr20 3485060 3485110 -68668772 - Tigger3(Golem) DNA MER2_type -2969 60 11 2015 158 0 0 chr20 3485211 3485508 -68668374 + AluJo SINE Alu 1 297 -15 976 234 118 17 chr20 3485512 3485867 -68668015 - L1MC5 LINE L1 -311 7650 7260 * 1048 196 27 162 chr20 3485835 3486354 -68667528 - L1MC5 LINE L1 -902 7059 6611 2027 211 41 41 chr20 3486437 3486629 -68667253 - L1MC5 LINE L1 -1907 5901 5710 931 48 112 0 chr20 3486629 3486754 -68667128 - MER85 DNA T2_type 0 139 1 2027 211 41 41 chr20 3486754 3487124 -68666758 - L1MC5 LINE L1 -2097 5711 5339 240 288 81 9 chr20 3487384 3487495 -68666387 - L1 LINE L1 -1141 5005 4887 26 0 0 0 chr20 3487633 3487659 -68666223 + AT_rich Low_complexity Low_complexity 1 26 0 1018 128 0 0 chr20 3487958 3488091 -68665791 + FLAM_A SINE Alu 1 133 0 737 173 8 23 chr20 3488665 3488798 -68665084 + MER3 DNA MER1_type 1 131 -78 185 0 0 39 chr20 3488798 3488824 -68665058 + (TTTAA)n Simple_repeat Simple_repeat 1 25 0 1630 131 123 0 chr20 3489158 3489460 -68664422 - AluSx SINE Alu 0 333 1 1862 144 10 20 chr20 3489652 3489950 -68663932 + AluJb SINE Alu 1 295 -17 2237 102 0 20 chr20 3490379 3490684 -68663198 - AluSg SINE Alu -11 299 1 251 270 0 24 chr20 3491901 3491996 -68661886 - MIR3 SINE MIR -3 205 113 585 76 0 0 chr20 3492092 3492171 -68661711 + (TCTA)n Simple_repeat Simple_repeat 4 82 0 2362 112 0 0 chr20 3494626 3494938 -68658944 + AluSx SINE Alu 1 312 0 1839 140 3 37 chr20 3496382 3496682 -68657200 + AluJo SINE Alu 1 290 -22 1162 150 155 19 chr20 3496911 3497118 -68656764 - MER46A DNA MER2_type -1 235 1 873 154 0 37 chr20 3497380 3497516 -68656366 + FLAM_C SINE Alu 1 131 -2 210 235 0 0 chr20 3498115 3498166 -68655716 + A-rich Low_complexity Low_complexity 4 54 0 255 226 19 0 chr20 3498891 3498944 -68654938 + MER112 DNA MER1_type 195 248 -12 2379 100 0 3 chr20 3498949 3499259 -68654623 + AluSc SINE Alu 1 309 0 303 353 0 0 chr20 3499756 3499872 -68654010 + MIR3 SINE MIR 84 199 -9 314 272 50 56 chr20 3500696 3500876 -68653006 + L1MB8 LINE L1 5181 5359 -787 3238 162 109 50 chr20 3501073 3501868 -68652014 + L1MB7 LINE L1 5195 6033 -151 612 188 187 26 chr20 3501896 3502085 -68651797 + L1MB8 LINE L1 5845 6050 -120 572 171 130 41 chr20 3502085 3502231 -68651651 + L1MB8 LINE L1 5845 6003 -175 3772 199 40 20 chr20 3502244 3503245 -68650637 - L1M4 LINE L1 -609 5575 4549 1843 134 3 11 chr20 3503245 3503570 -68650312 - AluJb SINE Alu 0 323 1 3772 199 40 20 chr20 3503570 3503675 -68650207 - L1M4 LINE L1 -1635 4549 4448 2464 221 54 40 chr20 3503667 3504394 -68649488 - L1M4 LINE L1 -2049 4097 3358 * 2215 86 3 58 chr20 3504394 3504720 -68649162 - AluSc SINE Alu -1 308 1 2464 221 54 40 chr20 3504720 3504738 -68649144 - L1M4 LINE L1 -2788 3358 3342 2273 99 0 3 chr20 3505379 3505673 -68648209 - AluSq SINE Alu -20 293 1 261 196 0 0 chr20 3505854 3505905 -68647977 - MER91B DNA MER1_type -138 52 2 319 281 141 22 chr20 3505977 3506162 -68647720 + L1ME4a LINE L1 5670 5876 -245 318 239 96 0 chr20 3506210 3506335 -68647547 + L1ME4a LINE L1 1200 6040 -7 2342 214 98 26 chr20 3506858 3507499 -68646383 - MER76 LTR ERV -1 687 1 2437 97 0 0 chr20 3507540 3507850 -68646032 + AluSx SINE Alu 1 310 -2 215 203 270 0 chr20 3508477 3508551 -68645331 - MIR SINE MIR -90 118 25 664 280 129 4 chr20 3508781 3509006 -68644876 - MIR SINE MIR -1 261 9 186 286 14 29 chr20 3509031 3509101 -68644781 - MIR SINE MIR -193 69 1 251 197 106 15 chr20 3509538 3509604 -68644278 + L2 LINE L2 3241 3312 -1 1104 218 68 12 chr20 3512493 3512909 -68640973 + L1ME LINE L1 5028 5462 -704 977 190 23 36 chr20 3512916 3513137 -68640745 - Charlie1 DNA MER1_type -284 2477 2260 284 331 11 56 chr20 3513510 3513688 -68640194 + Charlie7 DNA MER1_type 24 193 -2419 2130 278 145 35 chr20 3513882 3514957 -68638925 + Charlie7 DNA MER1_type 483 1676 -936 1322 198 8 4 chr20 3514957 3515194 -68638688 - MER8 DNA MER2_type -1 238 1 1065 223 193 18 chr20 3515194 3515622 -68638260 + Charlie7 DNA MER1_type 1675 2178 -434 711 235 87 32 chr20 3515654 3515999 -68637883 + Charlie7 DNA MER1_type 2221 2584 -28 739 234 46 46 chr20 3516499 3516696 -68637186 + MIR SINE MIR 3 199 -63 1730 185 0 16 chr20 3517003 3517316 -68636566 + AluJo SINE Alu 1 308 -4 493 275 32 50 chr20 3517356 3517469 -68636413 + MIR SINE MIR 49 158 -104 2279 109 0 3 chr20 3517469 3517772 -68636110 + AluSx SINE Alu 1 302 -10 493 275 32 50 chr20 3517772 3517876 -68636006 + MIR SINE MIR 158 262 0 2410 93 10 0 chr20 3518106 3518416 -68635466 + AluSq SINE Alu 1 313 0 2499 75 7 0 chr20 3518902 3519210 -68634672 - AluSp SINE Alu -3 310 1 639 282 110 18 chr20 3519223 3519450 -68634432 + MIR SINE MIR 15 262 0 6169 67 16 2 chr20 3520561 3521348 -68632534 + L1PA11 LINE L1 5375 6172 -2 766 271 74 23 chr20 3522091 3522522 -68631360 - L1M4 LINE L1 -2324 3822 3370 6648 137 39 17 chr20 3522527 3524107 -68629775 - L1MA4 LINE L1 0 6300 4667 2207 135 0 0 chr20 3524107 3524419 -68629463 + AluSq SINE Alu 1 312 -1 6648 137 39 17 chr20 3524419 3524963 -68628919 - L1MA4 LINE L1 -1633 4667 4136 2694 149 43 17 chr20 3525033 3525126 -68628756 + L1MB4 LINE L1 5685 5774 -406 369 62 0 0 chr20 3525126 3525174 -68628708 + (TG)n Simple_repeat Simple_repeat 2 49 0 2694 149 43 17 chr20 3525174 3525563 -68628319 + L1MB4 LINE L1 5774 6180 0 1009 193 16 44 chr20 3525588 3525837 -68628045 + L1MD2 LINE L1 4616 4857 -1289 780 192 8 0 chr20 3525846 3525976 -68627906 - FLAM_A SINE Alu -6 136 6 1914 137 0 70 chr20 3525990 3526318 -68627564 - AluJb SINE Alu -7 305 1 3547 182 18 39 chr20 3526320 3526882 -68627000 + L1MD2 LINE L1 4849 5376 -983 2083 125 10 10 chr20 3526882 3527179 -68626703 + AluSx SINE Alu 1 297 -15 3547 182 18 39 chr20 3527179 3527747 -68626135 + L1MD2 LINE L1 5376 5954 -405 497 137 21 42 chr20 3527775 3527870 -68626012 - MLT1E1 LTR MaLR -341 313 221 394 216 45 0 chr20 3527858 3527946 -68625936 - MLT1E1 LTR MaLR -558 96 5 * 21 0 0 0 chr20 3528128 3528149 -68625733 + AT_rich Low_complexity Low_complexity 1 21 0 2235 161 92 14 chr20 3530048 3530483 -68623399 - L1MB7 LINE L1 -8 6176 5708 1765 145 4 7 chr20 3530591 3530867 -68623015 + AluSx SINE Alu 23 297 -15 1510 122 5 5 chr20 3530966 3531187 -68622695 - AluSg/x SINE Alu 0 310 90 2501 52 7 0 chr20 3531187 3531477 -68622405 + L1PA4 LINE L1 5864 6155 0 541 205 49 44 chr20 3532755 3532960 -68620922 + L1MC5 LINE L1 7723 7928 -33 894 148 0 22 chr20 3532960 3533095 -68620787 + FLAM_C SINE Alu 2 133 0 411 263 73 69 chr20 3533653 3533927 -68619955 + HAL1 LINE L1 2225 2499 -8 191 88 29 0 chr20 3534925 3534959 -68618923 + (TTCA)n Simple_repeat Simple_repeat 1 35 0 202 261 0 0 chr20 3535479 3535525 -68618357 + C-rich Low_complexity Low_complexity 3 48 0 414 0 0 0 chr20 3535642 3535688 -68618194 + (TTTTG)n Simple_repeat Simple_repeat 1 46 0 1904 128 11 7 chr20 3535692 3535966 -68617916 - AluSx SINE Alu -37 275 1 1588 63 72 36 chr20 3536300 3536521 -68617361 - MER30 DNA MER1_type 0 230 2 284 246 14 0 chr20 3536788 3536857 -68617025 - MER46C DNA MER2_type 0 338 269 374 243 37 47 chr20 3537346 3537453 -68616429 - L2 LINE L2 0 3313 3208 535 251 38 66 chr20 3539176 3539359 -68614523 + MER104 DNA MER2_type 2 179 -1 1761 237 97 97 chr20 3540463 3541372 -68612510 - HAL1 LINE L1 0 2507 1596 2097 139 0 0 chr20 3541372 3541674 -68612208 + AluJb SINE Alu 1 302 -10 1761 237 97 97 chr20 3541674 3541819 -68612063 - HAL1 LINE L1 -910 1597 1453 321 225 0 25 chr20 3541833 3541913 -68611969 - L1ME3A LINE L1 -12 6158 6081 376 258 33 53 chr20 3542047 3542198 -68611684 - L1ME3A LINE L1 -104 6066 5919 2301 100 0 13 chr20 3542200 3542509 -68611373 - AluSx SINE Alu -7 305 1 1020 241 109 68 chr20 3542524 3542627 -68611255 + L1M4 LINE L1 2902 2999 -3147 889 171 114 0 chr20 3542627 3542785 -68611097 + MER5B DNA MER1_type 3 178 0 1020 241 109 68 chr20 3542785 3543296 -68610586 + L1M4 LINE L1 2999 3541 -2605 2470 65 0 0 chr20 3543313 3543606 -68610276 + AluY SINE Alu 1 293 -18 417 247 72 46 chr20 3543615 3543809 -68610073 + L1M4 LINE L1 3891 4089 -2057 1408 171 57 0 chr20 3543809 3544037 -68609845 + Tigger7 DNA MER2_type 25 265 -468 524 185 11 0 chr20 3544038 3544130 -68609752 + Tigger7 DNA MER2_type 2390 2482 -5 295 267 67 30 chr20 3544750 3544885 -68608997 + L2 LINE L2 2849 2988 -284 2384 221 58 45 chr20 3544905 3545614 -68608268 - MER21B LTR ERV1 -83 780 63 326 305 109 6 chr20 3545655 3545829 -68608053 + L2 LINE L2 3109 3300 -13 1876 146 16 25 chr20 3546357 3546672 -68607210 - AluJo SINE Alu 0 312 1 795 284 75 19 chr20 3547323 3547643 -68606239 + L2 LINE L2 2070 2407 -907 912 273 163 28 chr20 3547643 3548258 -68605624 + L2 LINE L2 2581 3275 -38 1812 110 46 19 chr20 3548302 3548565 -68605317 + AluSx SINE Alu 21 290 -22 2740 94 46 23 chr20 3550392 3550818 -68603064 + L1PB1 LINE L1 5742 6176 0 22 0 0 0 chr20 3551230 3551252 -68602630 + AT_rich Low_complexity Low_complexity 1 22 0 28 48 0 0 chr20 3551334 3551376 -68602506 + AT_rich Low_complexity Low_complexity 1 42 0 630 297 70 18 chr20 3551998 3552227 -68601655 - MIR SINE MIR 0 262 22 439 294 127 8 chr20 3553087 3553295 -68600587 - MIR SINE MIR -23 239 12 3864 81 4 6 chr20 3553540 3554033 -68599849 - L1PA8 LINE L1 -2 6170 5679 2041 122 7 0 chr20 3554669 3554975 -68598907 - AluSx SINE Alu 0 308 1 1231 255 100 59 chr20 3555285 3556058 -68597824 + L1MEd LINE L1 563 1303 -5007 3679 170 28 6 chr20 3556058 3556710 -68597172 + L1MB3 LINE L1 5511 6176 -7 1231 255 100 59 chr20 3556710 3556731 -68597151 + L1MEd LINE L1 1303 1322 -4988 2343 114 0 0 chr20 3556731 3557038 -68596844 + AluSx SINE Alu 1 307 -5 1231 255 100 59 chr20 3557038 3557291 -68596591 + L1MEd LINE L1 1322 1661 -4649 1596 273 137 20 chr20 3557437 3558101 -68595781 + L2 LINE L2 1957 2698 -616 565 188 157 13 chr20 3558150 3558381 -68595501 + MLT1E2 LTR MaLR 1 296 -330 896 187 0 0 chr20 3558386 3558541 -68595341 - FRAM SINE Alu -15 161 7 706 159 4 230 chr20 3558546 3558798 -68595084 + MLT1E2 LTR MaLR 410 604 -22 959 104 0 45 chr20 3558807 3558941 -68594941 + AluJo/FLAM SINE Alu 2 129 -173 458 129 0 71 chr20 3558870 3558955 -68594927 + FLAM_C SINE Alu 65 143 0 309 313 134 22 chr20 3560315 3560449 -68593433 - L1ME4a LINE L1 -199 5922 5774 499 217 130 7 chr20 3561460 3561598 -68592284 - MIR SINE MIR -16 246 92 483 228 168 60 chr20 3561840 3562072 -68591810 + L1MC4a LINE L1 5914 6170 -1638 22 35 0 0 chr20 3562073 3562102 -68591780 + AT_rich Low_complexity Low_complexity 1 29 0 255 175 0 0 chr20 3562964 3563021 -68590861 + CT-rich Low_complexity Low_complexity 3 59 0 195 100 0 0 chr20 3563022 3563052 -68590830 + (CA)n Simple_repeat Simple_repeat 1 30 0 465 229 106 37 chr20 3567412 3567769 -68586113 + MLT1J2 LTR MaLR 1 450 0 180 0 0 0 chr20 3567989 3568009 -68585873 + (CAA)n Simple_repeat Simple_repeat 2 21 0 234 0 0 0 chr20 3568450 3568476 -68585406 + (A)n Simple_repeat Simple_repeat 1 26 0 307 210 0 17 chr20 3569085 3569167 -68584715 + MLT1J LTR MaLR 247 381 -125 783 260 183 12 chr20 3569252 3569591 -68584291 - L2 LINE L2 -6 3307 2911 697 303 34 4 chr20 3569595 3569833 -68584049 + MER20B DNA MER1_type 202 446 -337 1046 209 88 86 chr20 3570834 3571207 -68582675 - MLT1D LTR MaLR -2 503 127 1924 130 38 0 chr20 3571207 3571499 -68582383 + AluJo SINE Alu 1 303 -9 1046 209 88 86 chr20 3571499 3571604 -68582278 - MLT1D LTR MaLR -378 127 24 1648 168 30 13 chr20 3571728 3572032 -68581850 - AluJo SINE Alu -3 309 1 1448 85 0 5 chr20 3572036 3572254 -68581628 - AluSc SINE Alu 0 308 92 581 278 12 0 chr20 3572254 3572423 -68581459 + MER20B DNA MER1_type 276 446 -337 497 121 0 0 chr20 3572536 3572602 -68581280 - AluS SINE Alu -243 66 1 357 313 134 5 chr20 3573001 3573218 -68580664 + MLT1K LTR MaLR 234 478 -110 2168 116 0 0 chr20 3573280 3573573 -68580309 + AluSx SINE Alu 1 293 -19 734 218 67 27 chr20 3573736 3573961 -68579921 - LTR16A1 LTR ERVL 0 457 224 408 228 24 31 chr20 3574016 3574143 -68579739 - LTR16A1 LTR ERVL -331 126 1 753 158 8 0 chr20 3574248 3574368 -68579514 + FRAM SINE Alu 48 168 -8 230 91 23 45 chr20 3574421 3574465 -68579417 - MLT1J LTR MaLR -378 133 91 239 272 112 32 chr20 3574519 3574644 -68579238 - MIR3 SINE MIR -41 167 33 23 0 0 0 chr20 3576338 3576361 -68577521 + GC_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr20 3576410 3576434 -68577448 + GC_rich Low_complexity Low_complexity 1 24 0 21 57 0 0 chr20 3579163 3579198 -68574684 + AT_rich Low_complexity Low_complexity 1 35 0 832 126 0 16 chr20 3579198 3579325 -68574557 - FLAM_C SINE Alu -18 125 1 1486 199 70 0 chr20 3579330 3579716 -68574166 - L1MD3 LINE L1 -8 7987 7575 245 150 0 0 chr20 3579781 3579821 -68574061 + Alu SINE Alu 250 289 -13 2091 108 0 17 chr20 3579880 3579891 -68573991 - AluSq SINE Alu -22 291 281 207 0 0 0 chr20 3579891 3579914 -68573968 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2091 108 0 17 chr20 3579914 3580198 -68573684 - AluSq SINE Alu -32 281 1 1496 117 24 12 chr20 3580198 3580446 -68573436 - LTR43 LTR ERV1 -351 251 1 3917 89 31 25 chr20 3580599 3580983 -68572899 - MER41A LTR ERV1 0 554 165 2291 84 24 0 chr20 3580983 3581281 -68572601 - AluSx SINE Alu -7 305 1 3917 89 31 25 chr20 3581281 3581447 -68572435 - MER41A LTR ERV1 -389 165 1 1227 238 122 45 chr20 3582122 3582145 -68571737 + MER74B LTR ERVL 56 76 -546 2276 101 0 0 chr20 3582145 3582443 -68571439 - AluSq SINE Alu -15 298 1 1227 238 122 45 chr20 3582443 3582927 -68570955 + MER74B LTR ERVL 76 602 -20 270 143 0 20 chr20 3583025 3583074 -68570808 + MLT1K LTR MaLR 502 549 0 236 59 59 59 chr20 3583231 3583299 -68570583 + (CCA)n Simple_repeat Simple_repeat 2 69 0 1750 158 7 3 chr20 3583385 3583670 -68570212 - AluJo SINE Alu -21 291 6 191 191 0 0 chr20 3588409 3588451 -68565431 - MIR SINE MIR -89 119 78 341 145 26 53 chr20 3588610 3588686 -68565196 - MIR SINE MIR -74 188 115 218 211 96 19 chr20 3591464 3591516 -68562366 + MIR SINE MIR 195 250 -12 1980 86 7 14 chr20 3591831 3592109 -68561773 - AluSx SINE Alu 0 312 37 371 266 28 7 chr20 3594128 3594261 -68559621 + MIR SINE MIR 50 191 -17 338 224 172 0 chr20 3594411 3594527 -68559355 + MER69 DNA AcHobo 1 136 -1090 210 71 0 0 chr20 3597346 3597374 -68556508 + (CAG)n Simple_repeat Simple_repeat 2 29 0 232 118 0 59 chr20 3597522 3597573 -68556309 + (CCCCCG)n Simple_repeat Simple_repeat 5 52 0 2412 67 0 0 chr20 3598207 3598507 -68555375 - AluSc SINE Alu -9 300 1 2392 82 3 0 chr20 3598530 3598836 -68555046 - AluSp SINE Alu -6 307 1 1497 178 0 48 chr20 3599166 3599410 -68554472 - AluJo SINE Alu -5 307 80 2382 97 0 0 chr20 3599410 3599720 -68554162 + AluSq SINE Alu 1 310 -3 1497 178 0 48 chr20 3599720 3599789 -68554093 - AluJo SINE Alu -232 80 9 327 306 45 13 chr20 3599833 3599849 -68554033 - L1MA10 LINE L1 -2 6332 6317 1438 239 38 23 chr20 3599849 3600292 -68553590 - L1ME2 LINE L1 -9 6155 5706 811 163 2 9 chr20 3600301 3600470 -68553412 - MLT2B2 LTR ERVL -19 535 322 303 312 113 39 chr20 3600660 3600891 -68552991 + L2 LINE L2 2979 3226 -46 369 188 12 0 chr20 3601497 3601577 -68552305 - L1ME2 LINE L1 -533 5637 5557 * 758 219 139 0 chr20 3601573 3601811 -68552071 + L1ME3A LINE L1 5900 6170 0 185 280 120 13 chr20 3602133 3602208 -68551674 - L2 LINE L2 -29 3284 3202 795 283 111 6 chr20 3603201 3603554 -68550328 + MLT1J LTR MaLR 91 480 -31 1071 192 264 5 chr20 3605694 3606122 -68547760 + MLT1H LTR MaLR 11 549 0 260 313 173 6 chr20 3606153 3606226 -68547656 - MIR SINE MIR -7 255 196 2074 144 0 0 chr20 3606226 3606532 -68547350 - AluSx SINE Alu -1 311 6 260 313 173 6 chr20 3606532 3606637 -68547245 - MIR SINE MIR -66 196 47 378 0 0 0 chr20 3609581 3609623 -68544259 + (CA)n Simple_repeat Simple_repeat 2 43 0 243 303 126 8 chr20 3610577 3610696 -68543186 + L2 LINE L2 3180 3312 -1 1931 119 61 0 chr20 3611226 3611504 -68542378 - AluSx SINE Alu -17 295 1 309 26 0 0 chr20 3611527 3611536 -68542346 + (CA)n Simple_repeat Simple_repeat 1 47 0 309 26 0 0 chr20 3611536 3611574 -68542308 + (CA)n Simple_repeat Simple_repeat 2 39 0 683 280 37 5 chr20 3613639 3613828 -68540054 + MER91A DNA MER1_type 2 196 0 1753 156 13 36 chr20 3615101 3615223 -68538659 + AluJo SINE Alu 1 124 -188 2063 113 10 0 chr20 3615223 3615514 -68538368 - AluSx SINE Alu -18 294 1 * 2398 97 0 0 chr20 3615513 3615824 -68538058 - AluSx SINE Alu -1 311 1 1753 156 13 36 chr20 3615824 3616008 -68537874 + AluJo SINE Alu 434 300 -12 2334 90 0 6 chr20 3616094 3616405 -68537477 - AluSc SINE Alu 0 309 1 180 370 65 0 chr20 3617211 3617303 -68536579 - MIR SINE MIR -43 219 122 1369 270 107 29 chr20 3617303 3617710 -68536172 + L1MC4 LINE L1 7332 7799 -243 2036 121 3 10 chr20 3617710 3618008 -68535874 + AluSx SINE Alu 1 296 -16 1369 270 107 29 chr20 3618008 3618181 -68535701 + L1MC4 LINE L1 7799 7957 -85 392 228 44 15 chr20 3618284 3618420 -68535462 + L1MC4 LINE L1 7903 8042 0 1960 140 0 23 chr20 3620022 3620330 -68533552 - AluJo SINE Alu -11 301 1 326 247 11 142 chr20 3620330 3620394 -68533488 - MIR SINE MIR -18 244 173 2063 142 3 0 chr20 3620394 3620703 -68533179 - AluSx SINE Alu -2 310 1 326 247 11 142 chr20 3620703 3620828 -68533054 - MIR SINE MIR -89 173 80 242 281 31 0 chr20 3621622 3621686 -68532196 + (CTGGGG)n Simple_repeat Simple_repeat 2 67 0 242 172 78 31 chr20 3623092 3623156 -68530726 + L2 LINE L2 2721 2787 -527 187 263 70 61 chr20 3623528 3623642 -68530240 - L2 LINE L2 -2773 541 427 4048 150 45 42 chr20 3623754 3623890 -68529992 + L1MB4 LINE L1 5022 5156 -1024 1655 142 68 14 chr20 3623890 3624171 -68529711 + AluJo SINE Alu 1 296 -16 2258 93 3 10 chr20 3624172 3624474 -68529408 + AluSc SINE Alu 1 300 -9 4048 150 45 42 chr20 3624474 3625477 -68528405 + L1MB4 LINE L1 5155 6172 -8 21 0 0 0 chr20 3626416 3626437 -68527445 + GC_rich Low_complexity Low_complexity 1 21 0 295 329 32 6 chr20 3627280 3627438 -68526444 + (TTGGGG)n Simple_repeat Simple_repeat 2 163 0 * 298 302 35 18 chr20 3627367 3627536 -68526346 + (TTAGGG)n Simple_repeat Simple_repeat 3 174 0 * 380 249 32 76 chr20 3627487 3627672 -68526210 + (TTGGGG)n Simple_repeat Simple_repeat 3 179 0 2214 128 0 0 chr20 3628568 3628880 -68525002 - AluSx SINE Alu 0 312 1 1774 149 6 40 chr20 3629061 3629384 -68524498 - AluJo SINE Alu 0 312 1 238 333 94 38 chr20 3629847 3630006 -68523876 + MLT1H LTR MaLR 112 279 -270 2112 115 0 0 chr20 3630332 3630618 -68523264 + AluSx SINE Alu 1 286 -26 1898 130 6 56 chr20 3630680 3631004 -68522878 - AluJb SINE Alu -2 310 3 219 284 75 0 chr20 3631007 3631074 -68522808 - MIR SINE MIR -112 150 79 777 262 68 17 chr20 3631091 3631385 -68522497 - MLT1J LTR MaLR -15 496 188 893 199 0 0 chr20 3631389 3631545 -68522337 + FRAM SINE Alu 8 163 -13 234 303 220 23 chr20 3631556 3631688 -68522194 - MLT1J LTR MaLR -317 194 37 198 347 84 0 chr20 3631958 3632053 -68521829 + MIR SINE MIR 5 107 -155 1267 67 0 0 chr20 3632613 3632777 -68521105 + AluY SINE Alu 136 299 -12 1937 111 44 0 chr20 3632785 3633055 -68520827 + AluSx SINE Alu 3 284 -28 314 273 81 20 chr20 3633481 3633580 -68520302 + HAL1 LINE L1 799 903 -1604 1677 184 0 16 chr20 3633580 3633884 -68519998 + AluJb SINE Alu 1 299 -13 336 279 225 0 chr20 3633895 3634024 -68519858 - MLT1J LTR MaLR -317 194 37 618 180 0 9 chr20 3634041 3634193 -68519689 + AluSg/x SINE Alu 196 310 0 2076 109 0 35 chr20 3634235 3634547 -68519335 - AluSx SINE Alu -7 305 5 741 221 75 42 chr20 3634550 3634763 -68519119 - MIR SINE MIR -41 221 2 297 75 0 0 chr20 3634765 3634805 -68519077 + (TTTA)n Simple_repeat Simple_repeat 3 42 0 718 174 8 15 chr20 3634817 3634917 -68518965 + AluJo/FLAM SINE Alu 2 102 -200 1645 181 0 17 chr20 3634917 3635204 -68518678 - AluJb SINE Alu -30 282 1 718 174 8 15 chr20 3635204 3635235 -68518647 + AluJo/FLAM SINE Alu 102 132 -170 426 250 167 57 chr20 3635238 3635430 -68518452 + HAL1 LINE L1 908 1120 -1387 236 206 134 21 chr20 3635577 3635674 -68518208 + MLT1L LTR MaLR 383 490 -125 247 293 46 63 chr20 3636354 3636417 -68517465 + HAL1b LINE L1 747 810 -538 2028 119 0 0 chr20 3636417 3636724 -68517158 + AluSg SINE Alu 3 309 0 247 293 46 63 chr20 3636724 3636833 -68517049 + HAL1b LINE L1 810 917 -431 304 388 8 15 chr20 3636935 3637069 -68516813 + HAL1 LINE L1 2228 2360 -147 421 142 0 43 chr20 3637069 3637336 -68516546 + AluJb SINE Alu 1 312 0 807 192 36 30 chr20 3637718 3638060 -68515822 + Tigger2 DNA MER2_type 1 2707 -11 267 31 0 0 chr20 3638133 3638165 -68515717 + (TAAA)n Simple_repeat Simple_repeat 3 34 0 2154 120 0 0 chr20 3638171 3638471 -68515411 + AluSx SINE Alu 1 300 -12 2094 134 20 64 chr20 3638474 3638629 -68515253 + L1MC2 LINE L1 5182 5342 -1080 1856 122 29 0 chr20 3638629 3638907 -68514975 + AluSx SINE Alu 9 294 -18 2094 134 20 64 chr20 3638907 3639253 -68514629 + L1MC2 LINE L1 5342 5675 -747 1492 171 42 65 chr20 3639254 3639331 -68514551 + AluJo SINE Alu 1 78 -224 2043 130 3 10 chr20 3639331 3639653 -68514229 - AluSx SINE Alu 0 312 1 1492 171 42 65 chr20 3639653 3639884 -68513998 + AluJo SINE Alu 78 302 0 555 141 16 16 chr20 3639893 3640014 -68513868 + GA-rich Low_complexity Low_complexity 4 124 0 2290 143 64 40 chr20 3640029 3640742 -68513140 + L1MC2 LINE L1 5661 6332 -12 812 99 0 0 chr20 3640772 3640883 -68512999 - AluSg/x SINE Alu -14 298 188 1537 111 0 0 chr20 3640883 3641091 -68512791 - AluSx SINE Alu -93 219 12 958 156 6 18 chr20 3641130 3641297 -68512585 + FRAM SINE Alu 1 165 -1 2235 109 3 0 chr20 3641638 3641941 -68511941 + AluSq SINE Alu 1 304 -9 186 43 0 0 chr20 3641970 3641993 -68511889 + (TTTTC)n Simple_repeat Simple_repeat 3 25 0 895 192 0 0 chr20 3642005 3642161 -68511721 - AluJb SINE Alu -21 291 136 2296 90 0 0 chr20 3642167 3642466 -68511416 - AluSg SINE Alu -11 299 1 407 265 24 36 chr20 3642833 3642999 -68510883 + L2 LINE L2 2149 2312 -1002 998 307 28 40 chr20 3643009 3643511 -68510371 - MLT1J LTR MaLR -3 508 13 306 329 21 7 chr20 3643933 3644073 -68509809 + L2 LINE L2 2914 3055 -217 317 258 41 10 chr20 3644654 3644751 -68509131 + MIR SINE MIR 92 191 -71 336 234 0 0 chr20 3644884 3644978 -68508904 + (TG)n Simple_repeat Simple_repeat 1 94 0 221 255 94 34 chr20 3645484 3645633 -68508249 - L2 LINE L2 -533 2781 2624 411 290 0 16 chr20 3646363 3646546 -68507336 + (CA)n Simple_repeat Simple_repeat 1 180 0 222 118 0 0 chr20 3646993 3647027 -68506855 + (TTCA)n Simple_repeat Simple_repeat 4 37 0 1426 171 15 15 chr20 3647027 3647296 -68506586 - AluJo SINE Alu -32 280 12 217 174 0 22 chr20 3647819 3647865 -68506017 + CT-rich Low_complexity Low_complexity 6 50 0 31 92 0 0 chr20 3647987 3648074 -68505808 + GC_rich Low_complexity Low_complexity 1 87 0 1003 125 0 0 chr20 3649437 3649581 -68504301 + AluJb SINE Alu 146 289 -23 2023 150 7 0 chr20 3650144 3650444 -68503438 - AluJb SINE Alu -10 302 1 207 223 0 0 chr20 3650650 3650703 -68503179 - MIR SINE MIR -63 145 93 2315 102 0 0 chr20 3650868 3651172 -68502710 - AluSq SINE Alu -9 304 1 269 200 67 0 chr20 3651266 3651326 -68502556 + L2 LINE L2 3205 3268 -4 1038 214 19 5 chr20 3651376 3651582 -68502300 + MER63A DNA MER1_type 1 209 -1 759 205 96 12 chr20 3652097 3652147 -68501735 - MER5A DNA MER1_type -6 183 139 1932 88 0 104 chr20 3652147 3652513 -68501369 + AluSx SINE Alu 1 333 0 759 205 96 12 chr20 3652513 3652627 -68501255 - MER5A DNA MER1_type -50 139 4 184 219 38 95 chr20 3652696 3652801 -68501081 + L2 LINE L2 1687 1785 -1529 417 177 0 0 chr20 3652813 3652875 -68501007 + AluJ/FRAM SINE Alu 231 292 -20 2255 103 0 0 chr20 3653127 3653428 -68500454 + AluSx SINE Alu 1 301 -11 384 263 163 37 chr20 3653564 3653754 -68500128 + L2 LINE L2 3085 3298 -15 442 256 88 37 chr20 3653758 3653973 -68499909 + L1MC5 LINE L1 7558 7783 -178 198 118 0 0 chr20 3654239 3654273 -68499609 + (TG)n Simple_repeat Simple_repeat 1 34 0 1986 145 0 3 chr20 3656756 3657053 -68496829 + AluSx SINE Alu 1 296 -16 1314 120 0 0 chr20 3658095 3658278 -68495604 - AluSg/x SINE Alu -3 307 125 2123 91 3 42 chr20 3658282 3658591 -68495291 - AluY SINE Alu -14 297 1 1847 131 13 55 chr20 3658591 3658903 -68494979 - AluJo SINE Alu -13 299 1 435 235 149 60 chr20 3658934 3659249 -68494633 - L1ME4a LINE L1 -162 5959 5617 247 208 0 0 chr20 3659282 3659335 -68494547 + A-rich Low_complexity Low_complexity 1 53 0 420 308 202 22 chr20 3659892 3660259 -68493623 + L2 LINE L2 2532 2964 -350 204 333 9 27 chr20 3660647 3660758 -68493124 + G-rich Low_complexity Low_complexity 5 113 0 1027 193 104 73 chr20 3661662 3661706 -68492176 - LTR16A1 LTR ERVL 0 457 416 2584 33 7 0 chr20 3661706 3662008 -68491874 - AluY SINE Alu -7 304 1 1027 193 104 73 chr20 3662008 3662347 -68491535 - LTR16A1 LTR ERVL -41 416 62 412 317 42 24 chr20 3666489 3666656 -68487226 + MIR SINE MIR 82 251 -11 355 257 22 37 chr20 3668295 3668431 -68485451 + MIR3 SINE MIR 10 143 -65 255 318 145 0 chr20 3672104 3672283 -68481599 + L1ME4a LINE L1 5613 5817 -304 198 0 0 0 chr20 3672433 3672455 -68481427 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 2184 88 7 3 chr20 3672475 3672769 -68481113 + AluSc SINE Alu 1 295 -14 308 272 68 0 chr20 3672770 3672873 -68481009 + L1ME4a LINE L1 5974 6083 -38 1480 117 14 0 chr20 3673034 3673248 -68480634 - AluSg/x SINE Alu -9 301 85 343 282 188 0 chr20 3673532 3673681 -68480201 - MIR SINE MIR -57 205 29 180 352 63 19 chr20 3674299 3674458 -68479424 - MIR3 SINE MIR -24 184 19 228 111 0 0 chr20 3675360 3675396 -68478486 + (CA)n Simple_repeat Simple_repeat 1 36 0 335 341 16 8 chr20 3676261 3676390 -68477492 + L1MC4a LINE L1 6873 7002 -806 401 296 63 12 chr20 3676453 3676701 -68477181 + L1MC4a LINE L1 7005 7228 -620 2301 108 0 0 chr20 3676737 3677042 -68476840 - AluSq SINE Alu -8 305 1 439 263 33 19 chr20 3677156 3677352 -68476530 + L1MC5 LINE L1 7268 7492 -522 198 0 0 0 chr20 3677364 3677386 -68476496 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 1999 116 48 0 chr20 3677412 3677706 -68476176 + AluSg SINE Alu 1 308 -2 1493 142 124 8 chr20 3677790 3678057 -68475825 - AluJb SINE Alu -13 299 2 633 179 69 58 chr20 3678064 3678237 -68475645 + MER58B DNA MER1_type 167 341 0 2412 80 0 0 chr20 3678381 3678682 -68475200 + AluSx SINE Alu 2 302 -10 2334 63 7 3 chr20 3678682 3678983 -68474899 + AluSp SINE Alu 1 302 -11 328 273 141 16 chr20 3678998 3679119 -68474763 + L1MC5 LINE L1 7609 7744 -217 450 329 136 30 chr20 3679778 3680146 -68473736 + L2 LINE L2 2864 3270 -2 420 279 71 7 chr20 3680764 3680904 -68472978 + MIR SINE MIR 25 173 -89 189 273 0 65 chr20 3682673 3682750 -68471132 - MIR SINE MIR -76 132 61 301 335 47 16 chr20 3684478 3684669 -68469213 + Charlie8 DNA MER1_type 4 200 -2217 1985 105 0 34 chr20 3684868 3685183 -68468699 - AluSx SINE Alu 0 305 1 248 259 111 0 chr20 3685304 3685385 -68468497 - L2 LINE L2 -5 3267 3178 2520 53 0 0 chr20 3685834 3686135 -68467747 + AluY SINE Alu 1 301 -10 804 167 0 36 chr20 3686222 3686360 -68467522 - FLAM_C SINE Alu 0 133 1 1044 168 0 0 chr20 3686458 3686619 -68467263 - FRAM SINE Alu -5 161 1 1391 202 3 63 chr20 3686630 3686947 -68466935 - AluSx SINE Alu -4 298 1 578 231 1 0 chr20 3686949 3687086 -68466796 - L1ME LINE L1 -551 5611 5474 261 0 0 0 chr20 3687224 3687253 -68466629 + (CA)n Simple_repeat Simple_repeat 2 30 0 1463 123 0 5 chr20 3687253 3687473 -68466409 + AluSg/x SINE Alu 93 311 -1 720 223 32 40 chr20 3687476 3687727 -68466155 + L1MC4a LINE L1 5589 5837 -1971 1240 149 0 0 chr20 3687728 3687909 -68465973 - AluSx SINE Alu -131 181 1 928 242 65 87 chr20 3687925 3688360 -68465522 - MLT2B3 LTR ERVL 0 554 128 2280 104 0 0 chr20 3688360 3688668 -68465214 - AluSx SINE Alu -4 308 1 928 242 65 87 chr20 3688668 3688694 -68465188 - MLT2B3 LTR ERVL -426 128 103 1641 171 38 3 chr20 3688695 3688987 -68464895 + AluSx SINE Alu 1 302 -10 232 374 146 0 chr20 3689170 3689293 -68464589 + L2 LINE L2 3132 3272 0 1588 183 0 64 chr20 3689342 3689494 -68464388 + AluJb SINE Alu 1 124 -188 2048 120 10 0 chr20 3689494 3689785 -68464097 + AluSx SINE Alu 3 296 -16 1588 183 0 64 chr20 3689785 3689944 -68463938 + AluJb SINE Alu 124 292 -20 2282 113 0 0 chr20 3689953 3690263 -68463619 + AluSx SINE Alu 1 310 -2 21 0 0 0 chr20 3690263 3690284 -68463598 + AT_rich Low_complexity Low_complexity 1 21 0 701 204 17 28 chr20 3690284 3690467 -68463415 - MLT1E LTR MaLR -381 186 1 25 51 0 0 chr20 3690686 3690725 -68463157 + AT_rich Low_complexity Low_complexity 1 39 0 1269 250 31 34 chr20 3691269 3691621 -68462261 + MLT1E LTR MaLR 243 593 0 2090 133 3 3 chr20 3691664 3691972 -68461910 + AluSx SINE Alu 1 308 -4 246 205 0 162 chr20 3691972 3692089 -68461793 - L1ME LINE L1 -460 5710 5613 2012 119 10 3 chr20 3692090 3692384 -68461498 - AluSq SINE Alu -17 296 1 25 31 0 0 chr20 3693586 3693618 -68460264 + GC_rich Low_complexity Low_complexity 1 32 0 2223 97 13 3 chr20 3695468 3695768 -68458114 + AluSx SINE Alu 7 309 -3 315 0 0 0 chr20 3695823 3695858 -68458024 + (CA)n Simple_repeat Simple_repeat 1 35 0 207 254 68 0 chr20 3697360 3697419 -68456463 + MIR SINE MIR 88 150 -112 2130 111 6 16 chr20 3697492 3697807 -68456075 + AluSx SINE Alu 1 312 0 206 255 235 10 chr20 3697907 3698009 -68455873 + MIR SINE MIR 76 200 -62 243 177 0 0 chr20 3700277 3700339 -68453543 + (CAT)n Simple_repeat Simple_repeat 3 64 0 711 179 0 0 chr20 3700536 3700681 -68453201 + CT-rich Low_complexity Low_complexity 2 146 0 42 0 0 0 chr20 3701890 3701932 -68451950 + GC_rich Low_complexity Low_complexity 1 42 0 1840 154 13 19 chr20 3703306 3703618 -68450264 - AluJb SINE Alu 0 312 3 1914 138 0 40 chr20 3704080 3704405 -68449477 + AluSx SINE Alu 1 312 0 270 0 0 0 chr20 3706943 3706973 -68446909 + (TC)n Simple_repeat Simple_repeat 1 30 0 * 405 0 0 0 chr20 3706972 3707017 -68446865 + (CA)n Simple_repeat Simple_repeat 1 45 0 1875 48 0 52 chr20 3707993 3708244 -68445638 + AluY SINE Alu 37 274 -37 315 0 0 0 chr20 3708244 3708279 -68445603 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 276 109 16 62 chr20 3710498 3710562 -68443320 - MER45 DNA AcHobo -56 122 62 22 0 0 0 chr20 3710984 3711006 -68442876 + GC_rich Low_complexity Low_complexity 1 22 0 1926 160 0 3 chr20 3713103 3713396 -68440486 + AluJb SINE Alu 1 292 -20 324 243 141 40 chr20 3713399 3713425 -68440457 + L2 LINE L2 1689 1711 -1603 2249 92 0 23 chr20 3713425 3713730 -68440152 + AluSc SINE Alu 1 298 -11 324 243 141 40 chr20 3713730 3713880 -68440002 + L2 LINE L2 1711 1883 -1431 722 150 0 30 chr20 3713934 3714067 -68439815 + FLAM_A SINE Alu 2 130 -3 1331 167 36 113 chr20 3714266 3714601 -68439281 - AluJb SINE Alu -3 309 1 2027 80 8 0 chr20 3714603 3714854 -68439028 - AluY SINE Alu -8 303 51 350 103 35 0 chr20 3714854 3714912 -68438970 - AluSq/x SINE Alu -158 145 86 1328 156 5 22 chr20 3714912 3715136 -68438746 - AluJo SINE Alu -92 220 1 812 234 16 5 chr20 3715139 3715327 -68438555 - AluJb SINE Alu 0 312 123 1359 172 0 29 chr20 3715739 3715983 -68437899 - AluJo SINE Alu -17 295 59 25 0 0 0 chr20 3717235 3717260 -68436622 + AT_rich Low_complexity Low_complexity 1 25 0 2460 94 0 0 chr20 3717639 3717947 -68435935 - AluSg SINE Alu -1 309 2 2466 87 0 3 chr20 3717948 3718257 -68435625 - AluSx SINE Alu -4 308 1 1557 170 62 4 chr20 3718391 3718667 -68435215 + AluJb SINE Alu 1 292 -20 1167 152 6 6 chr20 3718673 3718851 -68435031 + FRAM SINE Alu 1 175 -1 1984 139 6 29 chr20 3718851 3719167 -68434715 + AluSx SINE Alu 1 309 -3 341 200 13 27 chr20 3719285 3719360 -68434522 + MLT1K LTR MaLR 156 229 -359 22 0 0 0 chr20 3721053 3721075 -68432807 + AT_rich Low_complexity Low_complexity 1 22 0 748 153 0 0 chr20 3724704 3724822 -68429060 + AluJo/FLAM SINE Alu 1 118 -184 2354 98 3 13 chr20 3724822 3725138 -68428744 + AluSp SINE Alu 1 313 0 2433 105 0 0 chr20 3725735 3726041 -68427841 - AluSx SINE Alu -6 306 1 483 286 8 8 chr20 3726044 3726177 -68427705 + LTR16C LTR ERVL 346 478 -13 984 155 0 0 chr20 3728031 3728173 -68425709 + FRAM SINE Alu 4 145 -31 205 317 72 56 chr20 3728216 3728396 -68425486 - L2 LINE L2 -831 2483 2301 522 211 49 49 chr20 3728548 3728690 -68425192 + FLAM_A SINE Alu 1 142 0 1948 167 3 3 chr20 3728892 3729203 -68424679 + AluJb SINE Alu 1 311 -1 2317 98 0 16 chr20 3729205 3729373 -68424509 - AluSx SINE Alu -11 301 139 2121 104 3 79 chr20 3729373 3729691 -68424191 - AluSq SINE Alu -19 294 1 2317 98 0 16 chr20 3729691 3729828 -68424054 - AluSx SINE Alu -173 139 1 263 366 14 7 chr20 3730258 3730400 -68423482 + MLT1L LTR MaLR 341 483 -132 325 316 70 37 chr20 3730485 3730672 -68423210 + L2 LINE L2 2849 3041 -231 2800 13 0 0 chr20 3731720 3732019 -68421863 + AluYb8 SINE Alu 1 299 -19 2113 142 0 7 chr20 3732291 3732594 -68421288 - AluSx SINE Alu -11 301 1 1756 172 21 3 chr20 3732714 3732999 -68420883 - AluJb SINE Alu -22 290 1 2374 98 3 0 chr20 3733001 3733012 -68420870 - AluSg SINE Alu -3 307 298 198 0 0 0 chr20 3733012 3733034 -68420848 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 2374 98 3 0 chr20 3733034 3733328 -68420554 - AluSg SINE Alu -12 298 1 2412 89 7 0 chr20 3733908 3734211 -68419671 - AluSq SINE Alu -8 305 1 2593 78 0 0 chr20 3734628 3734936 -68418946 - AluY SINE Alu -3 308 1 523 279 75 10 chr20 3735135 3735336 -68418546 + MIR SINE MIR 3 216 -46 925 191 36 21 chr20 3735336 3735530 -68418352 + MER3 DNA MER1_type 1 197 -12 2374 95 0 0 chr20 3736236 3736530 -68417352 - AluSc SINE Alu -15 294 1 498 251 21 37 chr20 3736548 3736735 -68417147 - L1MC4 LINE L1 -94 7948 7765 406 188 180 23 chr20 3736742 3736870 -68417012 + MER5A DNA MER1_type 39 186 -3 2466 73 0 32 chr20 3736945 3737260 -68416622 + AluSx SINE Alu 1 305 -7 2421 92 0 7 chr20 3737337 3737642 -68416240 - AluSq SINE Alu -10 303 1 2544 239 48 56 chr20 3737653 3738128 -68415754 - L1MC4 LINE L1 -262 7627 7149 2393 77 0 22 chr20 3738128 3738439 -68415443 - AluY SINE Alu -7 304 1 2544 239 48 56 chr20 3738439 3738518 -68415364 - L1MC4 LINE L1 -740 7149 7071 2366 101 3 0 chr20 3738518 3738814 -68415068 - AluSp SINE Alu -16 297 1 2544 239 48 56 chr20 3738814 3739251 -68414631 - L1MC4 LINE L1 -818 7071 6555 1861 141 0 0 chr20 3739251 3739513 -68414369 + AluSx SINE Alu 37 298 -14 2544 239 48 56 chr20 3739513 3739578 -68414304 - L1MC4 LINE L1 -1334 6555 6491 367 233 133 52 chr20 3739589 3739680 -68414202 - L1MC4a LINE L1 -1476 6332 6250 2354 98 0 19 chr20 3739680 3739997 -68413885 - AluSq SINE Alu -2 311 1 2251 110 3 0 chr20 3739999 3740289 -68413593 - AluSg SINE Alu -19 291 1 367 233 133 52 chr20 3740289 3740404 -68413478 - L1MC4a LINE L1 -1558 6250 6106 2207 97 13 26 chr20 3740560 3740869 -68413013 - AluY SINE Alu -6 305 1 1426 178 55 31 chr20 3740871 3741163 -68412719 - AluJo SINE Alu -13 299 1 2585 40 0 13 chr20 3741335 3741634 -68412248 + AluY SINE Alu 1 295 -16 740 167 24 0 chr20 3741670 3741796 -68412086 - FLAM_C SINE Alu -4 129 1 1019 129 0 29 chr20 3741799 3741969 -68411913 - FRAM SINE Alu -1 165 1 2395 100 0 0 chr20 3742475 3742775 -68411107 - AluSx SINE Alu -12 300 1 2304 110 10 0 chr20 3743271 3743581 -68410301 - AluSp SINE Alu 0 313 1 731 221 136 34 chr20 3743585 3743938 -68409944 - L1MC5 LINE L1 -36 7925 7537 1554 132 0 17 chr20 3743956 3744191 -68409691 - AluJb SINE Alu -81 231 1 360 201 132 14 chr20 3744316 3744460 -68409422 - HAL1b LINE L1 -509 839 679 2259 98 3 29 chr20 3744476 3744791 -68409091 - AluSp SINE Alu -4 309 3 2344 151 34 14 chr20 3745006 3745424 -68408458 - MSTB LTR MaLR 0 426 1 2249 129 0 0 chr20 3745796 3746105 -68407777 - AluSx SINE Alu -3 309 1 371 318 13 33 chr20 3746145 3746296 -68407586 + MIR SINE MIR 7 154 -108 261 350 60 26 chr20 3748749 3748983 -68404899 + L2 LINE L2 1759 2000 -1314 413 315 56 53 chr20 3749045 3749347 -68404535 + L2 LINE L2 2244 2546 -768 2350 108 0 0 chr20 3750101 3750396 -68403486 + AluSg SINE Alu 1 295 -15 220 351 77 50 chr20 3751272 3751494 -68402388 - MIR SINE MIR -4 258 31 394 228 61 61 chr20 3751614 3751728 -68402154 - MARNA DNA Mariner -207 379 266 2236 96 0 7 chr20 3751963 3752245 -68401637 + AluSp SINE Alu 21 300 -13 1735 161 18 7 chr20 3752291 3752577 -68401305 - AluJo SINE Alu -23 289 1 239 204 32 32 chr20 3752587 3752680 -68401202 - HAL1b LINE L1 -575 773 681 2261 108 0 14 chr20 3752695 3752991 -68400891 - AluSx SINE Alu -20 292 1 1427 277 68 15 chr20 3754017 3754674 -68399208 + L2 LINE L2 2521 3202 -111 2166 122 0 3 chr20 3755836 3756132 -68397750 - AluJb SINE Alu -5 307 13 1059 183 95 0 chr20 3756493 3756522 -68397360 - L1MD2 LINE L1 -177 6182 6157 222 37 0 0 chr20 3756522 3756549 -68397333 + (TG)n Simple_repeat Simple_repeat 2 28 0 1059 183 95 0 chr20 3756549 3756760 -68397122 - L1MD2 LINE L1 -202 6157 5919 776 145 8 0 chr20 3756928 3757052 -68396830 + FLAM_C SINE Alu 2 126 -7 2418 94 0 0 chr20 3757061 3757358 -68396524 + AluSx SINE Alu 3 299 -13 2377 115 0 3 chr20 3757359 3757672 -68396210 + AluSx SINE Alu 1 312 0 2332 94 3 3 chr20 3759830 3760128 -68393754 + AluSp SINE Alu 1 298 -15 429 269 117 0 chr20 3760574 3760719 -68393163 + L2 LINE L2 2911 3072 -241 1378 235 7 7 chr20 3760734 3760859 -68393023 + AluJo SINE Alu 7 131 -181 685 82 0 0 chr20 3760859 3760957 -68392925 + L1PA4 LINE L1 6054 6151 -4 1378 235 7 7 chr20 3760957 3761125 -68392757 + AluJo SINE Alu 130 300 -12 1903 161 26 0 chr20 3761170 3761474 -68392408 - AluJb SINE Alu 0 312 1 597 259 78 21 chr20 3761478 3761671 -68392211 + L2 LINE L2 3107 3310 -3 431 308 0 17 chr20 3761935 3762136 -68391746 + MIR SINE MIR 13 260 -2 2474 90 0 0 chr20 3762450 3762751 -68391131 - AluSx SINE Alu -11 301 1 2391 66 3 3 chr20 3763000 3763304 -68390578 - AluSc SINE Alu -5 304 1 2114 105 0 3 chr20 3763665 3763960 -68389922 - AluSx SINE Alu -16 296 3 2151 106 3 0 chr20 3764147 3764447 -68389435 + AluSx SINE Alu 1 301 -11 1795 117 19 62 chr20 3764447 3764754 -68389128 + AluSx SINE Alu 1 294 -18 1718 74 0 4 chr20 3764753 3764982 -68388900 + AluSg/x SINE Alu 82 309 -3 * 2124 87 49 0 chr20 3765065 3765353 -68388529 + AluSx SINE Alu 1 302 -10 2378 54 0 14 chr20 3766536 3766831 -68387051 - AluY SINE Alu -20 291 1 2081 102 3 23 chr20 3766836 3767141 -68386741 - AluSx SINE Alu -13 299 1 564 189 90 0 chr20 3767816 3767927 -68385955 + AluJb SINE Alu 158 278 -34 1654 188 3 13 chr20 3768040 3768343 -68385539 - AluJo SINE Alu -12 300 1 1500 143 91 8 chr20 3770012 3770277 -68383605 - AluJo SINE Alu -20 292 6 3130 220 27 48 chr20 3770330 3770570 -68383312 - L1M4 LINE L1 -884 5262 5018 2036 101 0 0 chr20 3770570 3770846 -68383036 - AluSg SINE Alu -11 299 24 3130 220 27 48 chr20 3770846 3770967 -68382915 - L1M4 LINE L1 -1128 5018 4896 1830 124 10 26 chr20 3770967 3771274 -68382608 - AluSq SINE Alu -11 302 1 3130 220 27 48 chr20 3771274 3771564 -68382318 - L1M4 LINE L1 -1250 4896 4632 1862 159 0 7 chr20 3771564 3771865 -68382017 - AluSx SINE Alu -12 300 2 3130 220 27 48 chr20 3771865 3772114 -68381768 - L1M4 LINE L1 -1514 4632 4379 837 189 6 18 chr20 3772114 3772283 -68381599 - AluJb SINE Alu -15 297 131 317 54 0 0 chr20 3772303 3772392 -68381490 + Alu SINE Alu 243 331 0 716 133 88 0 chr20 3772392 3772505 -68381377 - AluJb SINE Alu -188 124 2 345 179 0 0 chr20 3772507 3772574 -68381308 - L1M4 LINE L1 -1763 4383 4317 970 193 0 0 chr20 3772670 3772841 -68381041 - AluJo/FRAM SINE Alu -5 307 137 2251 107 0 0 chr20 3772841 3773150 -68380732 - AluSq SINE Alu -4 309 1 186 43 0 0 chr20 3773599 3773622 -68380260 + (TA)n Simple_repeat Simple_repeat 1 23 0 1863 129 21 0 chr20 3773622 3773901 -68379981 - AluSx SINE Alu -27 285 1 1359 152 104 11 chr20 3773913 3774182 -68379700 - L1MA6 LINE L1 0 6300 6007 1050 205 40 29 chr20 3774224 3774502 -68379380 + L1ME1 LINE L1 5768 6048 -118 2317 73 0 13 chr20 3774619 3774920 -68378962 + AluY SINE Alu 1 297 -14 31 68 0 0 chr20 3775006 3775065 -68378817 + AT_rich Low_complexity Low_complexity 1 59 0 372 304 67 41 chr20 3778093 3778287 -68375595 - MIR SINE MIR -33 229 31 198 0 0 0 chr20 3779630 3779652 -68374230 + (A)n Simple_repeat Simple_repeat 1 22 0 412 228 41 41 chr20 3779847 3779992 -68373890 - L1ME3A LINE L1 -219 5951 5807 2224 96 0 3 chr20 3780005 3780307 -68373575 - AluSx SINE Alu -11 301 1 937 156 0 12 chr20 3780358 3780518 -68373364 + AluSx SINE Alu 1 158 -154 788 180 49 22 chr20 3780541 3780724 -68373158 - MLT1A2 LTR MaLR -179 195 8 277 269 65 87 chr20 3780732 3781007 -68372875 - L1ME3A LINE L1 -1419 4727 4459 537 152 22 0 chr20 3781007 3781099 -68372783 + MLT1A2 LTR MaLR 281 374 0 711 274 151 12 chr20 3781153 3781576 -68372306 + L1ME3A LINE L1 4801 5282 -864 1961 123 17 0 chr20 3781576 3781869 -68372013 + AluSp SINE Alu 1 298 -15 884 99 12 25 chr20 3781893 3782055 -68371827 + (GAAA)n Simple_repeat Simple_repeat 4 163 0 2209 104 0 0 chr20 3782066 3782364 -68371518 + AluSx SINE Alu 1 298 -14 937 245 95 89 chr20 3782366 3782811 -68371071 + L1ME3A LINE L1 5280 5721 -449 1512 144 59 0 chr20 3782811 3783067 -68370815 - AluJo SINE Alu -19 293 23 937 245 95 89 chr20 3783067 3783087 -68370795 + L1ME3A LINE L1 5721 5739 -431 743 191 0 8 chr20 3783087 3783213 -68370669 - FLAM_A SINE Alu -8 125 1 937 245 95 89 chr20 3783213 3783400 -68370482 + L1ME3A LINE L1 5739 5937 -233 2294 88 7 0 chr20 3783643 3783951 -68369931 - AluSp SINE Alu -3 310 1 495 188 91 91 chr20 3784261 3784437 -68369445 + MER69A DNA AcHobo 2 177 0 521 234 0 9 chr20 3785272 3785383 -68368499 + MLT1-int LTR MaLR 772 881 -490 736 216 102 131 chr20 3785469 3785979 -68367903 + MLT1-int LTR MaLR 877 1371 0 1594 217 73 18 chr20 3786008 3786390 -68367492 + MLT1E2 LTR MaLR 215 617 -9 323 239 35 20 chr20 3787996 3788129 -68365753 + MIR SINE MIR 23 146 -62 1933 139 0 0 chr20 3788551 3788838 -68365044 - AluSx SINE Alu -5 307 21 1345 139 9 5 chr20 3788838 3789045 -68364837 + AluJb SINE Alu 93 303 -9 333 229 24 109 chr20 3789204 3789270 -68364612 - L1MC/D LINE L1 -795 5351 5450 2231 97 0 0 chr20 3789270 3789560 -68364322 - AluSx SINE Alu -22 290 1 333 229 24 109 chr20 3789560 3789750 -68364132 - L1MC/D LINE L1 -695 5451 5246 413 152 0 13 chr20 3789762 3789841 -68364041 - AluJ/FRAM SINE Alu -8 304 227 1650 144 62 17 chr20 3790345 3790458 -68363424 + AluJo SINE Alu 6 112 -200 2219 114 0 13 chr20 3790458 3790774 -68363108 + AluSx SINE Alu 1 312 0 1650 144 62 17 chr20 3790774 3790951 -68362931 + AluJo SINE Alu 112 309 -3 205 373 91 18 chr20 3791739 3791849 -68362033 - L2 LINE L2 -16 3256 3139 2158 153 18 0 chr20 3792863 3793204 -68360678 - MER7A DNA MER2_type -1 345 1 1185 164 17 30 chr20 3793228 3793459 -68360423 - AluJo SINE Alu -10 302 75 2145 124 3 0 chr20 3794936 3795242 -68358640 - AluSx SINE Alu -5 307 1 186 305 73 0 chr20 3795543 3795625 -68358257 - MIR SINE MIR -128 134 47 1687 158 0 51 chr20 3798111 3798427 -68355455 + AluJb SINE Alu 1 300 -12 925 118 71 164 chr20 3798846 3799084 -68354798 - MER20 DNA MER1_type -3 216 1 366 343 87 17 chr20 3799266 3799438 -68354444 - MIR3 SINE MIR -16 192 9 2075 109 0 23 chr20 3799845 3800148 -68353734 - AluSg SINE Alu -14 296 1 263 135 19 0 chr20 3800487 3800525 -68353357 + (CA)n Simple_repeat Simple_repeat 2 43 -11 2231 109 0 0 chr20 3800525 3800829 -68353053 - AluSx SINE Alu -6 306 3 263 135 19 0 chr20 3800829 3800842 -68353040 + (CA)n Simple_repeat Simple_repeat 43 54 0 1505 163 43 4 chr20 3800842 3801118 -68352764 - AluJb SINE Alu -25 287 1 299 323 31 10 chr20 3801247 3801343 -68352539 - MER5A DNA MER1_type -52 137 40 1576 166 34 7 chr20 3801906 3802201 -68351681 - AluJo SINE Alu -8 304 2 2236 97 3 0 chr20 3802453 3802752 -68351130 - AluSx SINE Alu -12 300 1 22 0 0 0 chr20 3802920 3802942 -68350940 + AT_rich Low_complexity Low_complexity 1 22 0 1997 140 0 0 chr20 3803335 3803635 -68350247 - AluSx SINE Alu -12 300 1 1881 145 0 32 chr20 3804115 3804425 -68349457 - AluSx SINE Alu -12 300 1 512 100 12 0 chr20 3804519 3804599 -68349283 + (TG)n Simple_repeat Simple_repeat 1 81 0 435 296 66 38 chr20 3805794 3806007 -68347875 + L2 LINE L2 2181 2399 -915 2285 143 117 29 chr20 3806007 3806453 -68347429 - L1MC1 LINE L1 -434 5899 5415 239 303 192 0 chr20 3806570 3806669 -68347213 + L2 LINE L2 3155 3272 0 3410 161 13 75 chr20 3806841 3807136 -68346746 - L1MDb LINE L1 -4471 2069 1758 2377 82 0 0 chr20 3807136 3807440 -68346442 + AluSq SINE Alu 1 304 -9 3410 161 13 75 chr20 3807440 3807502 -68346380 - L1MDb LINE L1 -4782 1758 1694 2066 130 0 0 chr20 3807502 3807794 -68346088 + AluSx SINE Alu 1 292 -20 3410 161 13 75 chr20 3807794 3808215 -68345667 - L1MDb LINE L1 -4846 1694 1249 1927 111 31 7 chr20 3808215 3808504 -68345378 - AluSq SINE Alu -17 296 1 3410 161 13 75 chr20 3808504 3808532 -68345350 - L1MDb LINE L1 -5291 1249 1314 2370 78 3 0 chr20 3808532 3808840 -68345042 - AluY SINE Alu -2 309 1 3410 161 13 75 chr20 3808840 3808927 -68344955 - L1MDb LINE L1 -5225 1315 1224 1445 113 0 74 chr20 3808927 3809183 -68344699 - AluY SINE Alu -14 297 61 621 147 140 7 chr20 3809187 3809323 -68344559 - L1MDb LINE L1 -5342 1198 1045 * 3863 204 72 45 chr20 3809319 3810310 -68343572 - L1MCb LINE L1 -4196 2368 1307 2341 82 0 3 chr20 3810310 3810615 -68343267 - AluSq SINE Alu -9 304 1 3863 204 72 45 chr20 3810615 3811413 -68342469 - L1MCb LINE L1 -5257 1307 532 1011 161 0 0 chr20 3811415 3811577 -68342305 + AluJb SINE Alu 147 308 -4 183 277 218 0 chr20 3812722 3812823 -68341059 + L2 LINE L2 1397 1519 -1795 378 218 69 90 chr20 3812824 3813012 -68340870 + L2 LINE L2 1812 1995 -1319 634 321 156 27 chr20 3813142 3813450 -68340432 + L2 LINE L2 2362 2629 -685 2186 44 0 0 chr20 3813450 3813699 -68340183 - AluY SINE Alu -23 288 40 634 321 156 27 chr20 3813699 3813910 -68339972 + L2 LINE L2 2629 2948 -366 235 292 82 62 chr20 3813987 3814182 -68339700 + L2 LINE L2 3105 3303 -10 512 243 21 0 chr20 3814627 3814767 -68339115 - L1 LINE L1 -898 5248 5106 2153 95 57 0 chr20 3814825 3815108 -68338774 - AluSp SINE Alu -14 299 1 22 0 0 0 chr20 3815136 3815158 -68338724 + AT_rich Low_complexity Low_complexity 1 22 0 303 93 0 0 chr20 3815502 3815545 -68338337 + (TG)n Simple_repeat Simple_repeat 1 43 0 214 261 0 0 chr20 3815646 3815711 -68338171 + A-rich Low_complexity Low_complexity 1 65 0 627 270 176 32 chr20 3816033 3816242 -68337640 - L1ME4a LINE L1 0 6121 5943 519 17 0 0 chr20 3816242 3816302 -68337580 + (CA)n Simple_repeat Simple_repeat 2 61 0 627 270 176 32 chr20 3816302 3816656 -68337226 - L1ME4a LINE L1 -178 5943 5330 1722 139 4 4 chr20 3816679 3816931 -68336951 - AluSq SINE Alu -12 301 50 561 271 101 0 chr20 3816987 3817186 -68336696 - MIR SINE MIR -1 261 43 261 294 134 35 chr20 3817196 3817509 -68336373 + L1MC4a LINE L1 4943 5286 -860 715 46 0 0 chr20 3817517 3817604 -68336278 + AluSc SINE Alu 202 288 -21 2451 225 73 53 chr20 3817662 3818484 -68335398 + L1MC4a LINE L1 5310 6147 -1661 1389 250 21 114 chr20 3818489 3819152 -68334730 + L1M4 LINE L1 1451 2174 -4651 319 77 0 0 chr20 3819152 3819191 -68334691 - U2 snRNA snRNA -149 39 1 1389 250 21 114 chr20 3819191 3819307 -68334575 + L1M4 LINE L1 2174 2343 -4482 2094 100 21 0 chr20 3819307 3819586 -68334296 + AluSx SINE Alu 1 285 -27 1389 250 21 114 chr20 3819586 3819606 -68334276 + L1M4 LINE L1 2343 2363 -4462 33 25 0 0 chr20 3820108 3820148 -68333734 + AT_rich Low_complexity Low_complexity 1 40 0 1236 199 151 19 chr20 3820417 3820729 -68333153 + L1MB8 LINE L1 5825 6177 -1 1493 165 0 89 chr20 3820733 3821048 -68332834 + AluJb SINE Alu 1 287 -25 182 204 136 0 chr20 3821570 3821614 -68332268 + L2 LINE L2 3212 3261 -11 471 60 0 0 chr20 3821786 3821853 -68332029 + (CA)n Simple_repeat Simple_repeat 2 68 0 907 113 8 0 chr20 3821859 3821983 -68331899 + AluJb SINE Alu 1 125 -187 1200 218 5 101 chr20 3822162 3822548 -68331334 + L1MC5 LINE L1 6615 6963 -998 209 135 27 0 chr20 3822548 3822585 -68331297 + (TA)n Simple_repeat Simple_repeat 1 38 0 871 219 36 86 chr20 3822628 3822872 -68331010 + L1MC5 LINE L1 7185 7407 -554 1849 142 35 3 chr20 3822872 3823161 -68330721 + AluSq SINE Alu 1 298 -15 871 219 36 86 chr20 3823161 3823277 -68330605 + L1MC5 LINE L1 7407 7527 -434 264 224 0 0 chr20 3823496 3823576 -68330306 - AluJ/monomer SINE Alu 0 314 235 1091 104 0 14 chr20 3823576 3823720 -68330162 - AluSq/x SINE Alu -170 142 1 488 265 100 9 chr20 3824211 3824389 -68329493 + MIR SINE MIR 40 230 -32 282 119 0 85 chr20 3824447 3824506 -68329376 + L1MC5 LINE L1 6907 6960 -1001 266 132 19 0 chr20 3824508 3824561 -68329321 + (TA)n Simple_repeat Simple_repeat 1 54 0 219 314 118 0 chr20 3824596 3824698 -68329184 - MIR SINE MIR -56 206 93 365 160 56 0 chr20 3824701 3824826 -68329056 + (TA)n Simple_repeat Simple_repeat 2 133 0 1388 172 76 8 chr20 3825025 3825287 -68328595 + AluJb SINE Alu 1 280 -32 263 322 35 0 chr20 3825751 3825838 -68328044 - MIR SINE MIR -114 148 59 2141 125 10 0 chr20 3826954 3827250 -68326632 + AluSx SINE Alu 1 299 -13 469 286 71 36 chr20 3827260 3827540 -68326342 - L1M4 LINE L1 -2201 3945 3656 2106 101 25 0 chr20 3827689 3827965 -68325917 - AluSx SINE Alu -15 297 15 2117 103 3 3 chr20 3828851 3829158 -68324724 + AluSx SINE Alu 1 307 0 200 148 0 66 chr20 3829292 3829353 -68324529 + (TTTTTA)n Simple_repeat Simple_repeat 2 58 0 604 129 0 69 chr20 3829357 3829458 -68324424 - AluSp/q SINE Alu -17 296 203 1354 157 14 5 chr20 3829458 3829674 -68324208 + AluJo SINE Alu 71 288 -24 29 0 0 0 chr20 3829674 3829703 -68324179 + AT_rich Low_complexity Low_complexity 1 29 0 373 241 88 122 chr20 3829703 3829950 -68323932 - HAL1b LINE L1 -840 508 271 2095 128 0 7 chr20 3829950 3830247 -68323635 - AluSx SINE Alu -17 295 1 373 241 88 122 chr20 3830247 3830294 -68323588 - HAL1b LINE L1 -1077 271 224 611 261 13 7 chr20 3830338 3830491 -68323391 + L1MC4 LINE L1 6701 6854 -1188 839 216 28 0 chr20 3830618 3830794 -68323088 + MER58A DNA MER1_type 42 222 -2 323 254 8 75 chr20 3831561 3831695 -68322187 - HAL1 LINE L1 -4 2503 2379 855 94 0 0 chr20 3831697 3831803 -68322079 + U6 snRNA snRNA 1 106 -1 21 0 0 0 chr20 3831804 3831825 -68322057 + AT_rich Low_complexity Low_complexity 1 21 0 441 248 99 0 chr20 3831825 3831986 -68321896 - HAL1 LINE L1 -115 2392 2216 534 193 0 0 chr20 3831994 3832077 -68321805 - AluJ/FLAM SINE Alu -228 84 2 317 299 84 26 chr20 3834014 3834168 -68319714 - HAL1 LINE L1 -345 2162 2000 740 172 147 73 chr20 3834210 3834414 -68319468 - MER20 DNA MER1_type 0 219 1 333 218 142 81 chr20 3834457 3834608 -68319274 - HAL1 LINE L1 -674 1833 1693 2328 103 0 0 chr20 3834608 3834910 -68318972 + AluSx SINE Alu 1 302 -10 333 218 142 81 chr20 3834910 3834931 -68318951 - HAL1 LINE L1 -814 1693 1675 216 0 0 0 chr20 3834931 3834955 -68318927 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 333 218 142 81 chr20 3834955 3834978 -68318904 - HAL1 LINE L1 -832 1675 1625 1232 126 0 0 chr20 3834979 3835153 -68318729 + AluSg/x SINE Alu 137 310 -2 21 36 0 0 chr20 3835193 3835221 -68318661 + AT_rich Low_complexity Low_complexity 1 28 0 980 109 13 26 chr20 3835232 3835388 -68318494 + BC200 scRNA scRNA 1 154 -46 3321 219 65 70 chr20 3835417 3835632 -68318250 - L1MEc LINE L1 -5217 1179 964 863 154 0 8 chr20 3835632 3835762 -68318120 - FLAM_A SINE Alu -4 129 1 3321 219 65 70 chr20 3835762 3836192 -68317690 - L1MEc LINE L1 -5432 964 533 15521 120 25 53 chr20 3836192 3836593 -68317289 - Tigger1 DNA MER2_type 0 2418 2007 1492 166 18 109 chr20 3836593 3836931 -68316951 - AluJo SINE Alu 0 312 6 15521 120 25 53 chr20 3836931 3837035 -68316847 - Tigger1 DNA MER2_type -411 2007 1902 315 0 0 0 chr20 3837035 3837070 -68316812 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 2270 87 0 0 chr20 3837076 3837353 -68316529 - AluSx SINE Alu -35 277 1 15521 120 25 53 chr20 3837353 3838304 -68315578 - Tigger1 DNA MER2_type -521 1897 1050 2070 136 0 13 chr20 3838304 3838620 -68315262 + AluJb SINE Alu 1 312 0 15521 120 25 53 chr20 3838620 3839642 -68314240 - Tigger1 DNA MER2_type -1368 1050 1 3321 219 65 70 chr20 3839642 3840034 -68313848 - L1MEc LINE L1 -5863 533 146 2425 53 3 23 chr20 3840177 3840479 -68313403 - AluY SINE Alu -15 296 1 1915 123 20 3 chr20 3840513 3840805 -68313077 + AluSq SINE Alu 1 297 -16 389 251 105 111 chr20 3840805 3841042 -68312840 - HAL1 LINE L1 -1068 1439 1202 2125 118 3 3 chr20 3841042 3841338 -68312544 - AluSx SINE Alu -16 296 1 389 251 105 111 chr20 3841338 3841749 -68312133 - HAL1 LINE L1 -1305 1202 795 1404 134 79 66 chr20 3841903 3842077 -68311805 - AluJo SINE Alu -3 309 128 2242 106 0 0 chr20 3842077 3842369 -68311513 - AluSc SINE Alu -17 292 1 1404 134 79 66 chr20 3842369 3842499 -68311383 - AluJo SINE Alu -184 128 1 2697 23 0 3 chr20 3842995 3843303 -68310579 - AluY SINE Alu -3 308 2 826 263 62 9 chr20 3844320 3844544 -68309338 + MIR SINE MIR 8 243 -19 34 42 0 0 chr20 3844558 3844606 -68309276 + AT_rich Low_complexity Low_complexity 1 48 0 200 182 0 0 chr20 3845348 3845381 -68308501 + (TGGG)n Simple_repeat Simple_repeat 3 35 0 246 243 14 14 chr20 3846964 3847034 -68306848 + L1M4 LINE L1 4959 5028 -1118 2081 116 42 0 chr20 3847239 3847524 -68306358 + AluSx SINE Alu 1 297 -15 4624 137 52 43 chr20 3848115 3848444 -68305438 - MER4D LTR ERV1 0 865 541 2417 78 0 19 chr20 3848444 3848752 -68305130 + AluSg SINE Alu 1 302 -8 4624 137 52 43 chr20 3848752 3849121 -68304761 - MER4D LTR ERV1 -324 541 194 1825 151 27 7 chr20 3849121 3849419 -68304463 - AluJb SINE Alu -8 304 1 4624 137 52 43 chr20 3849419 3849615 -68304267 - MER4D LTR ERV1 -671 194 1 1758 120 84 4 chr20 3850996 3851270 -68302612 + AluSg SINE Alu 6 301 -9 2158 113 17 0 chr20 3851440 3851741 -68302141 + AluSx SINE Alu 1 306 -6 1474 148 14 0 chr20 3852073 3852289 -68301593 - MER20 DNA MER1_type 0 219 1 333 228 73 32 chr20 3853615 3853738 -68300144 - L2 LINE L2 -41 3272 3145 420 149 138 0 chr20 3854293 3854380 -68299502 - L1M4 LINE L1 -2472 3674 3576 2051 82 78 4 chr20 3854933 3855214 -68298668 - AluSx SINE Alu -10 302 1 2093 118 17 3 chr20 3855460 3855756 -68298126 - AluSx SINE Alu -12 300 1 1130 200 33 9 chr20 3855890 3856100 -68297782 + U3 snRNA snRNA 1 215 -2 914 126 0 30 chr20 3856198 3856333 -68297549 - FLAM_A SINE Alu -1 132 2 4944 228 43 41 chr20 3856352 3857086 -68296796 + L1MC/D LINE L1 3725 4456 -1786 1531 151 4 54 chr20 3857086 3857365 -68296517 - AluJo SINE Alu -19 293 29 4944 228 43 41 chr20 3857365 3857669 -68296213 + L1MC/D LINE L1 4456 4758 -1484 766 202 16 0 chr20 3857669 3857798 -68296084 + FLAM_A SINE Alu 1 131 -2 4944 228 43 41 chr20 3857798 3858669 -68295213 + L1MC/D LINE L1 4758 5548 -694 3036 214 36 0 chr20 3858652 3859368 -68294514 + L1MB2 LINE L1 4468 5209 -937 * 4199 140 39 92 chr20 3859372 3859422 -68294460 + L1MB2 LINE L1 5282 5333 -838 1716 148 6 81 chr20 3859422 3859754 -68294128 + AluJo SINE Alu 1 307 -5 4199 140 39 92 chr20 3859754 3860620 -68293262 + L1MB2 LINE L1 5333 6150 -21 1393 138 0 9 chr20 3860621 3860831 -68293051 - AluSq SINE Alu -4 309 102 1774 151 7 21 chr20 3860832 3861111 -68292771 - AluJb SINE Alu -37 275 1 869 164 0 15 chr20 3861147 3861281 -68292601 + FLAM_C SINE Alu 2 133 0 739 275 55 55 chr20 3861282 3861415 -68292467 + L1MC4 LINE L1 7552 7684 -358 2266 115 0 0 chr20 3861415 3861719 -68292163 + AluSx SINE Alu 1 304 -8 739 275 55 55 chr20 3861719 3862033 -68291849 + L1MC4 LINE L1 7684 8002 -40 2158 109 20 0 chr20 3862033 3862326 -68291556 - AluSx SINE Alu -13 299 1 739 275 55 55 chr20 3862326 3862368 -68291514 + L1MC4 LINE L1 8001 8042 0 291 247 0 21 chr20 3862978 3863075 -68290807 - L1ME4a LINE L1 -49 6072 5978 2385 93 6 0 chr20 3863229 3863540 -68290342 - AluSp SINE Alu 0 313 1 1345 173 112 29 chr20 3863571 3863849 -68290033 + AluJo SINE Alu 1 301 -11 263 303 53 61 chr20 3864083 3864215 -68289667 - MIR3 SINE MIR -73 135 5 313 250 48 32 chr20 3864655 3864779 -68289103 - L1MC4a LINE L1 -1879 5929 5804 244 0 0 0 chr20 3864828 3864855 -68289027 + (TTTA)n Simple_repeat Simple_repeat 2 160 0 714 130 0 0 chr20 3864855 3864955 -68288927 - AluSg/x SINE Alu -1 308 183 1423 161 32 28 chr20 3864955 3865203 -68288679 + AluJb SINE Alu 64 312 0 575 290 20 20 chr20 3865236 3865436 -68288446 - L1MC4a LINE L1 -2035 5773 5574 366 312 92 44 chr20 3865581 3865717 -68288165 - L1MC4a LINE L1 -757 5389 5261 2204 113 3 3 chr20 3865717 3866017 -68287865 + AluSq SINE Alu 1 300 -13 366 312 92 44 chr20 3866017 3866130 -68287752 - L1MC4a LINE L1 -885 5261 5128 2757 29 0 13 chr20 3866617 3866932 -68286950 - AluY SINE Alu 0 311 1 2065 145 10 0 chr20 3866937 3867241 -68286641 - AluSx SINE Alu -5 307 1 254 269 133 23 chr20 3867248 3867504 -68286378 - L1MC4a LINE L1 -1481 4665 4382 2451 114 28 19 chr20 3867516 3867877 -68286005 + THE1B LTR MaLR 1 364 0 595 254 207 65 chr20 3868024 3868626 -68285256 - L2 LINE L2 0 3313 2622 1926 161 0 3 chr20 3868626 3868924 -68284958 + AluJb SINE Alu 1 297 -15 595 254 207 65 chr20 3868924 3868961 -68284921 - L2 LINE L2 -691 2622 2592 2484 90 0 0 chr20 3868968 3869279 -68284603 - AluY SINE Alu 0 311 1 260 309 157 20 chr20 3869414 3869618 -68284264 - L1MC4a LINE L1 -2293 3853 3622 354 234 43 11 chr20 3870010 3870104 -68283778 + MLT1K LTR MaLR 492 588 0 274 284 38 71 chr20 3870117 3870328 -68283554 + L1MC4 LINE L1 7838 8041 -1 2183 113 30 0 chr20 3870868 3871169 -68282713 - AluSg SINE Alu 0 310 1 445 241 65 121 chr20 3871243 3871475 -68282407 + MLT1J LTR MaLR 156 374 -137 1148 157 7 117 chr20 3871891 3872191 -68281691 + L1MD3 LINE L1 7719 7985 -10 2139 108 24 3 chr20 3872865 3873161 -68280721 - AluSx SINE Alu -10 302 1 961 181 101 21 chr20 3873622 3873860 -68280022 - HAL1 LINE L1 -787 1720 1464 1656 148 75 35 chr20 3873919 3874241 -68279641 - L1MA8 LINE L1 0 6291 5951 1575 161 0 23 chr20 3874241 3874501 -68279381 - AluJo SINE Alu -14 298 45 1656 148 75 35 chr20 3874501 3874549 -68279333 - L1MA8 LINE L1 -340 5951 5906 333 256 83 16 chr20 3874539 3874660 -68279222 - HAL1 LINE L1 -1106 1401 1273 * 300 261 89 9 chr20 3874660 3874840 -68279042 + L2 LINE L2 539 793 -2521 1618 225 133 43 chr20 3874845 3875467 -68278415 + L2 LINE L2 1154 1831 -1483 700 127 9 9 chr20 3875485 3875595 -68278287 - FLAM_A SINE Alu -14 128 19 376 205 0 13 chr20 3875618 3875696 -68278186 + L2 LINE L2 1865 1941 -1373 2273 100 0 20 chr20 3875696 3875997 -68277885 - AluSq SINE Alu -18 295 1 328 206 0 15 chr20 3876075 3876143 -68277739 - HAL1 LINE L1 -925 1582 1516 218 128 26 0 chr20 3876156 3876195 -68277687 + L2 LINE L2 2412 2451 -863 202 270 128 40 chr20 3876232 3876380 -68277502 + L2 LINE L2 3119 3279 -34 713 328 136 3 chr20 3876501 3876861 -68277021 - MLT1I LTR MaLR -1 408 1 29 70 0 0 chr20 3879299 3879356 -68274526 + GC_rich Low_complexity Low_complexity 1 57 0 203 61 30 0 chr20 3879356 3879389 -68274493 + (CGGGGG)n Simple_repeat Simple_repeat 5 38 0 185 130 43 0 chr20 3879629 3879675 -68274207 + (CCCCG)n Simple_repeat Simple_repeat 1 48 0 2295 78 7 0 chr20 3880647 3880942 -68272940 - AluSx SINE Alu -15 297 1 2162 114 13 3 chr20 3880942 3881249 -68272633 - AluSx SINE Alu -2 310 1 657 209 0 0 chr20 3881639 3881749 -68272133 + FLAM_A SINE Alu 7 116 -26 267 137 27 27 chr20 3881764 3881837 -68272045 + (TA)n Simple_repeat Simple_repeat 1 73 0 1093 168 0 0 chr20 3881845 3882018 -68271864 + AluJb SINE Alu 127 299 -13 4225 171 31 28 chr20 3882024 3882751 -68271131 - L1MB7 LINE L1 -82 6102 5363 2609 65 3 0 chr20 3882751 3883058 -68270824 - AluSp SINE Alu -5 308 1 4225 171 31 28 chr20 3883058 3883575 -68270307 - L1MB7 LINE L1 -821 5363 4849 2170 122 3 0 chr20 3884561 3884857 -68269025 - AluSq SINE Alu -16 297 1 1595 179 26 29 chr20 3884944 3885257 -68268625 + AluJo SINE Alu 1 312 0 1946 145 20 7 chr20 3885578 3885881 -68268001 - AluSx SINE Alu -5 307 1 330 143 18 0 chr20 3886159 3886215 -68267667 - MSTA LTR MaLR 0 428 372 553 31 0 0 chr20 3886249 3886313 -68267569 - MSTA LTR MaLR -40 388 325 * 2596 99 63 5 chr20 3886292 3886686 -68267196 - MSTA LTR MaLR -11 417 1 6323 159 7 22 chr20 3886691 3887748 -68266134 - MSTA-int LTR MaLR -6 1645 605 1358 157 0 0 chr20 3887748 3887946 -68265936 - AluSq SINE Alu -115 198 1 3592 162 0 0 chr20 3887947 3888542 -68265340 - MSTA-int LTR MaLR -1026 568 1 2608 115 66 5 chr20 3888552 3888944 -68264938 - MSTA LTR MaLR -12 416 1 391 132 146 62 chr20 3889171 3889315 -68264567 - MER53 DNA DNA -33 156 1 2214 117 0 0 chr20 3889383 3889674 -68264208 + AluSg SINE Alu 1 291 -19 2524 198 71 94 chr20 3889688 3889858 -68264024 - L1ME2 LINE L1 0 6164 5992 312 27 0 0 chr20 3889858 3889895 -68263987 + (CA)n Simple_repeat Simple_repeat 2 38 0 2524 198 71 94 chr20 3889895 3889953 -68263929 - L1ME2 LINE L1 -172 5992 5934 1986 157 0 10 chr20 3889953 3890258 -68263624 - AluJo SINE Alu -10 302 1 2524 198 71 94 chr20 3890258 3890678 -68263204 - L1ME2 LINE L1 -230 5934 5506 2312 105 3 3 chr20 3890678 3890983 -68262899 + AluSx SINE Alu 3 307 -5 2524 198 71 94 chr20 3890983 3891324 -68262558 - L1ME2 LINE L1 -658 5506 5201 2244 111 0 3 chr20 3891324 3891621 -68262261 - AluSq SINE Alu -6 307 12 2524 198 71 94 chr20 3891621 3891704 -68262178 - L1ME2 LINE L1 -963 5201 5118 349 224 41 10 chr20 3892011 3892024 -68261858 - MIR SINE MIR -71 191 180 2571 190 43 24 chr20 3892024 3892556 -68261326 + MLT1F LTR MaLR 1 542 0 349 224 41 10 chr20 3892556 3892640 -68261242 - MIR SINE MIR -82 180 91 768 168 0 28 chr20 3892709 3892845 -68261037 + FLAM_C SINE Alu 2 135 -177 2546 65 0 0 chr20 3892845 3893139 -68260743 - AluSq SINE Alu -19 294 1 39 31 0 16 chr20 3893145 3893182 -68260700 + AT_rich Low_complexity Low_complexity 1 38 -25 1652 166 0 18 chr20 3893182 3893459 -68260423 + AluJb SINE Alu 15 286 -26 39 31 0 16 chr20 3893459 3893485 -68260397 + AT_rich Low_complexity Low_complexity 38 63 0 186 291 55 0 chr20 3893667 3893722 -68260160 - MIR SINE MIR -195 67 10 3009 145 8 22 chr20 3894029 3894539 -68259343 + L1PB4 LINE L1 5654 6156 0 355 193 40 40 chr20 3894541 3894717 -68259165 + (TATAA)n Simple_repeat Simple_repeat 1 176 0 218 100 67 0 chr20 3894765 3894825 -68259057 + (TA)n Simple_repeat Simple_repeat 2 65 0 1286 230 65 25 chr20 3894885 3895207 -68258675 + LTR16C LTR ERVL 139 473 -18 2315 103 6 0 chr20 3895383 3895694 -68258188 + AluSp SINE Alu 1 313 0 2278 94 17 0 chr20 3895821 3896118 -68257764 + AluSx SINE Alu 1 302 -10 1497 85 60 0 chr20 3896184 3896383 -68257499 + AluSq SINE Alu 81 291 -22 692 249 16 104 chr20 3896384 3896550 -68257332 + L1MA9 LINE L1 5942 6060 -252 1775 174 7 0 chr20 3896550 3896837 -68257045 - AluJb SINE Alu -23 289 1 692 249 16 104 chr20 3896837 3897035 -68256847 + L1MA9 LINE L1 6060 6274 -38 492 239 107 89 chr20 3897048 3897155 -68256727 + L1ME LINE L1 5328 5432 -689 2300 84 10 7 chr20 3897155 3897451 -68256431 + AluSg SINE Alu 1 297 -13 492 239 107 89 chr20 3897451 3897618 -68256264 + L1ME LINE L1 5432 5595 -526 680 142 0 101 chr20 3897618 3897766 -68256116 + AluJ SINE Alu 1 133 -169 492 239 107 89 chr20 3897766 3897815 -68256067 + L1ME LINE L1 5595 5642 -479 1624 174 50 4 chr20 3897815 3898096 -68255786 + AluJb SINE Alu 1 294 -18 492 239 107 89 chr20 3898096 3898164 -68255718 + L1ME LINE L1 5642 5727 -394 21 0 0 0 chr20 3898353 3898374 -68255508 + AT_rich Low_complexity Low_complexity 1 21 0 32 0 0 0 chr20 3898472 3898504 -68255378 + AT_rich Low_complexity Low_complexity 1 32 0 1818 180 0 7 chr20 3898505 3898794 -68255088 - AluJo SINE Alu -25 287 1 1879 186 95 3 chr20 3899014 3899384 -68254498 - MER41D LTR ERV1 -9 548 145 517 137 147 0 chr20 3899384 3899479 -68254403 + AluJ SINE Alu 120 228 -84 2279 105 0 0 chr20 3899497 3899801 -68254081 - AluSc SINE Alu -5 304 1 291 100 0 0 chr20 3899813 3899853 -68254029 - MER41D LTR ERV1 -417 140 101 537 132 0 0 chr20 3899858 3899934 -68253948 - AluSq SINE Alu -153 160 85 1180 124 0 0 chr20 3899934 3900095 -68253787 - AluSx SINE Alu -133 179 19 499 133 0 0 chr20 3900096 3900171 -68253711 - MER41D LTR ERV1 -482 75 1 314 326 54 45 chr20 3900173 3900300 -68253582 + L1ME LINE L1 5347 5478 -643 1835 106 35 77 chr20 3900300 3900611 -68253271 + AluSx SINE Alu 1 298 -14 314 326 54 45 chr20 3900611 3900725 -68253157 + L1ME LINE L1 5478 5590 -531 656 274 5 53 chr20 3900968 3901176 -68252706 - MLT1J LTR MaLR -228 283 86 1023 118 0 0 chr20 3901221 3901356 -68252526 + AluSq/x SINE Alu 1 135 -178 2106 134 0 7 chr20 3901356 3901661 -68252221 + AluSx SINE Alu 1 303 -9 2919 82 31 11 chr20 3901753 3902212 -68251670 - MER1A DNA MER1_type 0 529 25 963 223 54 132 chr20 3902209 3902693 -68251189 + LTR16A1 LTR ERVL 12 457 0 * 244 286 104 49 chr20 3902801 3903087 -68250795 + MLT1I LTR MaLR 1 334 -215 2445 57 0 0 chr20 3903230 3903536 -68250346 + AluY SINE Alu 1 306 0 559 293 61 26 chr20 3904355 3904636 -68249246 + LTR16A LTR ERVL 1 360 -90 830 149 97 0 chr20 3904675 3904809 -68249073 - AluJb SINE Alu -25 287 141 248 284 84 0 chr20 3904920 3905015 -68248867 + HAL1 LINE L1 17 119 -2388 1768 189 0 10 chr20 3905048 3905344 -68248538 + AluJo SINE Alu 1 293 -19 274 225 0 28 chr20 3905344 3905415 -68248467 + L1MC3 LINE L1 5868 5936 -1872 1122 144 29 0 chr20 3906151 3906325 -68247557 - AluSg/x SINE Alu 0 312 134 1202 271 60 2 chr20 3906326 3906708 -68247174 - L1MC4 LINE L1 -533 7509 7101 2102 145 0 0 chr20 3906708 3907011 -68246871 - AluSx SINE Alu -9 303 1 1202 271 60 2 chr20 3907011 3907030 -68246852 - L1MC4 LINE L1 -941 7101 7085 951 139 0 14 chr20 3907044 3907188 -68246694 + FLAM_C SINE Alu 1 142 -1 815 204 0 0 chr20 3907231 3907368 -68246514 - FRAM SINE Alu -26 150 14 418 216 36 0 chr20 3907386 3907497 -68246385 - L1MC4 LINE L1 -968 7074 6960 855 148 0 8 chr20 3908188 3908316 -68245566 + FLAM_C SINE Alu 1 127 -16 434 261 54 0 chr20 3908334 3908445 -68245437 + HAL1 LINE L1 10 126 -2381 1934 145 0 39 chr20 3908500 3908810 -68245072 + AluJb SINE Alu 1 298 -14 255 231 0 0 chr20 3909185 3909237 -68244645 + LTR37B LTR ERV1 233 284 -184 423 0 0 0 chr20 3909295 3909342 -68244540 + (CA)n Simple_repeat Simple_repeat 2 48 0 2603 40 10 0 chr20 3909345 3909642 -68244240 - AluY SINE Alu -11 300 1 1283 135 60 71 chr20 3909642 3909691 -68244191 - MER41D LTR ERV1 -294 263 215 2281 122 0 0 chr20 3909691 3909995 -68243887 - AluSx SINE Alu -8 304 1 1283 135 60 71 chr20 3909995 3910211 -68243671 - MER41D LTR ERV1 -342 215 1 234 243 27 40 chr20 3910212 3910286 -68243596 + HAL1 LINE L1 1316 1388 -1119 1946 143 3 3 chr20 3910287 3910573 -68243309 + AluJo SINE Alu 1 286 -26 324 70 0 0 chr20 3910574 3910617 -68243265 + (CA)n Simple_repeat Simple_repeat 2 44 0 2933 185 141 121 chr20 3910617 3911198 -68242684 + L1MC3 LINE L1 6542 7110 -675 329 216 52 72 chr20 3911198 3911295 -68242587 + MLT1F1 LTR MaLR 39 133 -434 2933 185 141 121 chr20 3911295 3911798 -68242084 + L1MC3 LINE L1 7110 7745 -40 180 0 0 0 chr20 3911798 3911818 -68242064 + (T)n Simple_repeat Simple_repeat 1 20 0 579 253 0 39 chr20 3911911 3912065 -68241817 - L2 LINE L2 -1 3312 3165 205 363 25 0 chr20 3912035 3912115 -68241767 - L2 LINE L2 -646 2668 2587 * 6428 63 32 76 chr20 3912116 3913542 -68240340 - SVA Other Other -645 1384 342 518 122 0 0 chr20 3913557 3913631 -68240251 - AluJb SINE Alu -187 125 52 1962 138 7 17 chr20 3913640 3913936 -68239946 - AluJo SINE Alu -19 293 1 454 211 45 23 chr20 3913988 3914121 -68239761 + HAL1 LINE L1 1392 1527 -980 330 263 42 94 chr20 3914255 3914468 -68239414 + HAL1 LINE L1 2112 2313 -194 201 200 73 0 chr20 3914548 3914603 -68239279 + (TCTA)n Simple_repeat Simple_repeat 4 62 0 2131 90 72 0 chr20 3914775 3915054 -68238828 + AluSq SINE Alu 1 299 -14 265 256 44 15 chr20 3915486 3915623 -68238259 + L1MEd LINE L1 796 936 -5269 264 159 71 40 chr20 3915790 3915916 -68237966 + (TTATA)n Simple_repeat Simple_repeat 4 133 0 1728 173 3 0 chr20 3916044 3916328 -68237554 + AluJo SINE Alu 12 296 -16 447 331 69 38 chr20 3916335 3916570 -68237312 + L1MEd LINE L1 1663 1889 -4507 2181 112 0 20 chr20 3916570 3916875 -68237007 + AluSc SINE Alu 1 299 -10 447 331 69 38 chr20 3916875 3917157 -68236725 + L1MEd LINE L1 1889 2200 -4196 862 122 0 43 chr20 3917157 3917296 -68236586 + FLAM_C SINE Alu 1 133 0 447 331 69 38 chr20 3917296 3917311 -68236571 + L1MEd LINE L1 2200 2213 -4183 412 285 16 48 chr20 3917323 3917347 -68236535 + L1MEd LINE L1 2467 2490 -3725 1847 156 21 14 chr20 3917347 3917635 -68236247 + AluSx SINE Alu 1 290 -22 412 285 16 48 chr20 3917635 3917796 -68236086 + L1MEd LINE L1 2490 2646 -3569 951 293 81 7 chr20 3918013 3918471 -68235411 + L1MEd LINE L1 3213 3704 -2511 267 258 105 72 chr20 3918496 3918550 -68235332 + L1M4 LINE L1 4704 4755 -1391 1616 175 0 53 chr20 3918550 3918853 -68235029 + AluJb SINE Alu 3 289 -23 267 258 105 72 chr20 3918853 3919007 -68234875 + L1M4 LINE L1 4755 4919 -1227 314 279 137 6 chr20 3919007 3919168 -68234714 - LTR33A LTR ERVL -50 473 292 226 303 90 48 chr20 3919239 3919427 -68234455 - LTR50 LTR ERVL -564 231 36 484 254 88 82 chr20 3919433 3919573 -68234309 + L1M4 LINE L1 4925 5063 -1083 2292 105 0 0 chr20 3919573 3919869 -68234013 - AluSx SINE Alu -16 296 1 484 254 88 82 chr20 3919869 3919949 -68233933 + L1M4 LINE L1 5063 5141 -1005 2044 89 31 21 chr20 3919949 3920240 -68233642 - AluSp SINE Alu -19 294 1 828 139 31 0 chr20 3920246 3920375 -68233507 - FLAM_C SINE Alu 0 133 1 484 254 88 82 chr20 3920375 3920488 -68233394 + L1M4 LINE L1 5145 5268 -878 2360 113 0 0 chr20 3920554 3920863 -68233019 - AluSx SINE Alu -3 309 1 291 161 0 18 chr20 3920896 3920952 -68232930 + AluSp/q SINE Alu 242 296 -7 258 232 0 0 chr20 3920953 3921009 -68232873 + HAL1 LINE L1 2312 2367 -140 242 246 35 0 chr20 3921045 3921102 -68232780 + CT-rich Low_complexity Low_complexity 2 60 0 1098 198 9 9 chr20 3921102 3921314 -68232568 - AluJb SINE Alu -17 295 84 263 280 0 0 chr20 3921314 3921389 -68232493 + HAL1 LINE L1 2432 2506 -1 2034 96 0 32 chr20 3921539 3921819 -68232063 + AluSx SINE Alu 26 296 -16 453 301 29 21 chr20 3921825 3922104 -68231778 + L1M4 LINE L1 4754 5034 -1112 2498 76 3 0 chr20 3922508 3922809 -68231073 - AluSc SINE Alu -7 302 1 1655 145 48 7 chr20 3922819 3923110 -68230772 - AluJo SINE Alu 0 304 3 296 311 47 14 chr20 3923111 3923259 -68230623 + MLT1K LTR MaLR 421 573 -15 1587 185 16 53 chr20 3923420 3923739 -68230143 + AluJb SINE Alu 1 307 -5 483 252 14 84 chr20 3923917 3924131 -68229751 - MLT1K LTR MaLR -66 522 324 607 311 102 68 chr20 3924146 3924635 -68229247 - MLT1K LTR MaLR -8 580 75 1269 244 79 16 chr20 3924860 3925290 -68228592 - LTR16A1 LTR ERVL 0 457 1 1804 174 20 103 chr20 3925362 3925412 -68228470 - L1MA9 LINE L1 -38 6274 6221 1591 99 41 0 chr20 3925412 3925633 -68228249 + MER30 DNA MER1_type 1 230 0 1804 174 20 103 chr20 3925633 3925934 -68227948 - L1MA9 LINE L1 -91 6221 5973 1716 181 4 4 chr20 3925934 3926215 -68227667 - AluJb SINE Alu -31 281 1 1804 174 20 103 chr20 3926215 3926355 -68227527 - L1MA9 LINE L1 -339 5973 5823 701 154 8 0 chr20 3926355 3926472 -68227410 - FLAM_C SINE Alu -2 141 24 1864 234 64 21 chr20 3926606 3927076 -68226806 + LTR16C LTR ERVL 1 490 -1 24 53 0 0 chr20 3927182 3927220 -68226662 + AT_rich Low_complexity Low_complexity 1 38 0 294 154 0 0 chr20 3927302 3927354 -68226528 + U5 snRNA snRNA 1 52 -64 1984 118 4 0 chr20 3927375 3927647 -68226235 + AluSx SINE Alu 1 273 -39 556 219 7 7 chr20 3927647 3927802 -68226080 + GA-rich Low_complexity Low_complexity 2 156 0 2378 91 3 0 chr20 3927930 3928227 -68225655 + AluSx SINE Alu 1 298 -14 570 266 81 9 chr20 3928840 3929062 -68224820 - MIR SINE MIR -6 256 19 213 322 11 33 chr20 3929163 3929253 -68224629 + MIR SINE MIR 33 120 -88 1244 181 109 26 chr20 3929850 3929951 -68223931 + AluJb SINE Alu 1 92 -220 228 67 0 0 chr20 3929951 3929981 -68223901 + (CAA)n Simple_repeat Simple_repeat 2 31 0 1244 181 109 26 chr20 3929981 3930144 -68223738 + AluJb SINE Alu 92 287 -25 188 183 0 33 chr20 3930145 3930205 -68223677 + (CATA)n Simple_repeat Simple_repeat 2 59 0 239 328 0 0 chr20 3930441 3930508 -68223374 + L2 LINE L2 3107 3173 -99 2087 121 0 0 chr20 3930728 3931059 -68222823 - AluSx SINE Alu 0 331 1 456 19 0 0 chr20 3931233 3931286 -68222596 + (TG)n Simple_repeat Simple_repeat 1 53 0 2035 123 0 46 chr20 3932020 3932136 -68221746 - AluSq SINE Alu -2 311 191 2503 60 3 0 chr20 3932136 3932436 -68221446 - AluY SINE Alu -10 301 1 2035 123 0 46 chr20 3932436 3932645 -68221237 - AluSq SINE Alu -122 191 1 1217 261 164 3 chr20 3932910 3933300 -68220582 + LTR16B LTR ERVL 1 453 -11 904 261 20 0 chr20 3933314 3933513 -68220369 - MER63A DNA MER1_type -7 203 1 493 228 35 48 chr20 3933513 3933658 -68220224 + L1ME LINE L1 5642 5784 -386 883 181 44 0 chr20 3933677 3933837 -68220045 - AluJo/FRAM SINE Alu -12 300 134 1613 176 7 29 chr20 3933837 3934143 -68219739 - AluJo SINE Alu -13 299 1 2191 119 3 0 chr20 3934151 3934446 -68219436 - AluSx SINE Alu -16 296 1 2056 152 3 0 chr20 3934446 3934769 -68219113 - L1M3 LINE L1 -374 5797 5474 677 173 8 31 chr20 3934770 3934897 -68218985 - FLAM_A SINE Alu -5 128 5 2281 109 0 10 chr20 3934929 3935233 -68218649 - AluSx SINE Alu -11 301 1 285 265 20 10 chr20 3935300 3935398 -68218484 + L2 LINE L2 3215 3313 0 1209 182 146 77 chr20 3935428 3935534 -68218348 + MLT1D LTR MaLR 1 98 -407 2226 101 7 13 chr20 3935534 3935840 -68218042 + AluSx SINE Alu 2 305 -7 1209 182 146 77 chr20 3935840 3936151 -68217731 + MLT1D LTR MaLR 98 447 -58 1022 179 0 0 chr20 3936373 3936541 -68217341 + FAM SINE Alu 4 171 -4 216 0 0 0 chr20 3936605 3936629 -68217253 + (T)n Simple_repeat Simple_repeat 1 24 0 315 283 10 20 chr20 3936725 3936824 -68217058 + L1M4 LINE L1 2260 2357 -3789 272 222 25 0 chr20 3937126 3937207 -68216675 + CT-rich Low_complexity Low_complexity 4 86 0 413 180 90 0 chr20 3937410 3937499 -68216383 + MLT1D LTR MaLR 407 503 -2 1022 224 57 24 chr20 3938406 3938652 -68215230 + LTR16A1 LTR ERVL 204 457 0 388 265 146 40 chr20 3939244 3939395 -68214487 - MLT1H1 LTR MaLR 0 595 429 * 947 202 80 106 chr20 3939362 3939597 -68214285 - MLT1H1 LTR MaLR -251 304 77 243 0 0 0 chr20 3939597 3939624 -68214258 + (TGGGGG)n Simple_repeat Simple_repeat 3 29 0 947 202 80 106 chr20 3939624 3939700 -68214182 - MLT1H1 LTR MaLR -478 77 1 2005 148 3 13 chr20 3939767 3940078 -68213804 - AluJo SINE Alu -3 309 2 376 243 73 68 chr20 3940837 3941178 -68212704 - MLT1G1 LTR MaLR 0 595 248 2155 86 46 0 chr20 3941231 3941511 -68212371 - AluSg SINE Alu -17 293 1 184 234 0 21 chr20 3941891 3941938 -68211944 - L2 LINE L2 -1 3271 3226 1923 129 11 3 chr20 3941945 3942231 -68211651 - AluJb SINE Alu -24 288 1 186 143 0 0 chr20 3942587 3942622 -68211260 + (CACG)n Simple_repeat Simple_repeat 3 37 0 202 235 0 49 chr20 3942772 3942853 -68211029 + (CGG)n Simple_repeat Simple_repeat 2 78 0 318 132 0 0 chr20 3942949 3943002 -68210880 + (CTG)n Simple_repeat Simple_repeat 3 55 0 201 143 0 0 chr20 3943009 3943044 -68210838 + (CGG)n Simple_repeat Simple_repeat 2 36 0 469 256 119 74 chr20 3944107 3944419 -68209463 - L2 LINE L2 -62 3251 2926 277 280 196 40 chr20 3944758 3945207 -68208675 - L2 LINE L2 -13 3259 2755 2406 53 3 0 chr20 3946089 3946395 -68207487 + AluY SINE Alu 1 307 0 2294 92 3 3 chr20 3946414 3946717 -68207165 + AluSg SINE Alu 1 303 -7 203 197 158 26 chr20 3946976 3947052 -68206830 - MIR SINE MIR -15 247 162 1863 165 0 3 chr20 3947530 3947833 -68206049 + AluJb SINE Alu 5 306 -6 378 278 105 23 chr20 3947892 3948025 -68205857 - MIR SINE MIR -113 149 6 2370 94 0 3 chr20 3948242 3948541 -68205341 + AluSq SINE Alu 3 300 -13 206 233 0 0 chr20 3948658 3948701 -68205181 + L2 LINE L2 3180 3222 -91 206 233 0 0 chr20 3948735 3948778 -68205104 + L2 LINE L2 3180 3222 -91 204 219 0 0 chr20 3948812 3948853 -68205029 + L2 LINE L2 3180 3220 -93 222 209 0 0 chr20 3948889 3948932 -68204950 + L2 LINE L2 3180 3222 -91 222 209 0 0 chr20 3948966 3949009 -68204873 + L2 LINE L2 3180 3222 -91 206 233 0 0 chr20 3949043 3949086 -68204796 + L2 LINE L2 3180 3222 -91 222 209 0 0 chr20 3949120 3949163 -68204719 + L2 LINE L2 3180 3222 -91 206 233 0 0 chr20 3949197 3949240 -68204642 + L2 LINE L2 3180 3222 -91 219 166 49 190 chr20 3949317 3949480 -68204402 + L2 LINE L2 3174 3313 0 3239 72 54 41 chr20 3949924 3950408 -68203474 + L1PA7 LINE L1 5664 6153 -1 1480 175 130 0 chr20 3950633 3950902 -68202980 - AluJo SINE Alu -8 304 1 347 361 44 47 chr20 3950936 3951274 -68202608 - L2 LINE L2 -4 3268 2932 1794 212 67 25 chr20 3951300 3951748 -68202134 - MLT1C LTR MaLR 0 467 1 406 301 93 82 chr20 3951887 3952316 -68201566 + MLT1K LTR MaLR 155 588 0 244 128 0 0 chr20 3952347 3952386 -68201496 - MLT1A1 LTR MaLR -4 361 323 1569 181 14 31 chr20 3953067 3953355 -68200527 - AluJo SINE Alu -27 285 3 210 71 0 0 chr20 3953500 3953528 -68200354 + (T)n Simple_repeat Simple_repeat 1 28 0 25 112 0 0 chr20 3953773 3953889 -68199993 + AT_rich Low_complexity Low_complexity 1 116 0 314 232 53 70 chr20 3954923 3955069 -68198813 - L1ME3A LINE L1 -311 5842 5687 1724 187 3 3 chr20 3955069 3955363 -68198519 - AluJb SINE Alu -18 294 1 314 232 53 70 chr20 3955363 3955420 -68198462 - L1ME3A LINE L1 -466 5687 5631 267 239 65 84 chr20 3955420 3955683 -68198199 - Charlie2 DNA MER1_type -1 2861 2604 1856 182 3 3 chr20 3955683 3955990 -68197892 + AluJo SINE Alu 1 307 -5 436 343 15 27 chr20 3956013 3956279 -68197603 - L1ME3A LINE L1 -1008 5121 4859 351 0 0 0 chr20 3956626 3956665 -68197217 + (TTA)n Simple_repeat Simple_repeat 2 40 0 229 253 122 61 chr20 3956871 3957116 -68196766 - L1ME3A LINE L1 -1820 4309 4050 386 260 26 52 chr20 3957161 3957327 -68196555 - L1ME3A LINE L1 -2248 3881 3719 2428 97 0 0 chr20 3957327 3957636 -68196246 - AluSg SINE Alu -1 309 1 386 260 26 52 chr20 3957636 3957661 -68196221 - L1ME3A LINE L1 -2410 3719 3695 333 291 66 18 chr20 3957678 3957895 -68195987 - L1ME3A LINE L1 -875 1615 1412 385 171 53 135 chr20 3957895 3958065 -68195817 - L1MC5 LINE L1 -48 7913 7758 1565 164 92 0 chr20 3958112 3958393 -68195489 - AluSx SINE Alu 0 312 6 1345 281 106 59 chr20 3958492 3958965 -68194917 - L1MEd LINE L1 -4840 1289 840 1903 101 8 0 chr20 3958965 3959213 -68194669 - AluSg1 SINE Alu -24 285 36 1345 281 106 59 chr20 3959213 3959900 -68193982 - L1MEd LINE L1 -5289 840 82 1464 261 62 62 chr20 3959915 3960665 -68193217 - L1M4 LINE L1 -984 5162 4409 2214 91 0 0 chr20 3960665 3960968 -68192914 - AluSx SINE Alu 0 314 12 1464 261 62 62 chr20 3960968 3961021 -68192861 - L1M4 LINE L1 -1736 4410 4358 524 274 161 46 chr20 3962877 3963336 -68190546 + L2 LINE L2 1702 2213 -1101 192 305 189 12 chr20 3963339 3963503 -68190379 + L2 LINE L2 2349 2541 -773 360 0 0 0 chr20 3963888 3963928 -68189954 + (TG)n Simple_repeat Simple_repeat 2 41 0 282 95 0 0 chr20 3964536 3964578 -68189304 + (GA)n Simple_repeat Simple_repeat 2 43 0 213 39 0 0 chr20 3964595 3964621 -68189261 + (CA)n Simple_repeat Simple_repeat 1 26 0 286 125 57 40 chr20 3964627 3964803 -68189079 + (TA)n Simple_repeat Simple_repeat 1 179 0 23 0 0 0 chr20 3964803 3964826 -68189056 + AT_rich Low_complexity Low_complexity 1 23 0 210 37 0 0 chr20 3964842 3964869 -68189013 + (TG)n Simple_repeat Simple_repeat 2 28 0 1592 182 3 27 chr20 3964883 3965180 -68188702 - AluJo SINE Alu -22 290 1 885 116 8 0 chr20 3965181 3965302 -68188580 - AluJo SINE Alu -178 134 13 272 322 148 75 chr20 3965646 3966031 -68187851 - L2 LINE L2 -12 3260 2848 191 322 58 58 chr20 3966068 3966242 -68187640 - L2 LINE L2 -570 2744 2571 262 321 28 9 chr20 3966450 3966556 -68187326 - L2 LINE L2 -1026 2288 2181 23 0 0 0 chr20 3966805 3966828 -68187054 + AT_rich Low_complexity Low_complexity 1 23 0 318 272 150 41 chr20 3967049 3967196 -68186686 - MER5B DNA MER1_type -15 163 1 567 250 131 48 chr20 3967395 3967807 -68186075 + L1MC4a LINE L1 5749 6194 -1614 14474 24 0 5 chr20 3967830 3969659 -68184223 - L1PA3 LINE L1 -2928 3218 1399 18137 27 1 2 chr20 3969659 3972591 -68181291 + L1PA3 LINE L1 3217 6151 -4 35 0 0 0 chr20 3972591 3972626 -68181256 + AT_rich Low_complexity Low_complexity 1 35 0 630 310 35 22 chr20 3972936 3973252 -68180630 + L1MC4a LINE L1 6495 6814 -994 394 291 40 84 chr20 3973266 3973517 -68180365 + L1MEd LINE L1 348 587 -5829 3363 211 73 70 chr20 3974005 3976140 -68177742 + L1MDb LINE L1 7 2009 -4397 1988 124 3 24 chr20 3976140 3976477 -68177405 + AluSq SINE Alu 1 331 0 3363 211 73 70 chr20 3976477 3976751 -68177131 + L1MDb LINE L1 2009 2281 -4125 2746 193 32 2 chr20 3976751 3977280 -68176602 + MLT2B3 LTR ERVL 2 546 -8 851 207 132 3 chr20 3977281 3977633 -68176249 + L1MDb LINE L1 2273 2672 -3734 1320 189 21 89 chr20 3977646 3978040 -68175842 + L1MD2 LINE L1 5971 6358 -1 359 140 0 110 chr20 3978039 3978082 -68175800 + L1MD3 LINE L1 7698 7725 -270 * 2186 124 0 3 chr20 3978082 3978388 -68175494 + AluSx SINE Alu 1 305 -7 359 140 0 110 chr20 3978388 3978444 -68175438 + L1MD3 LINE L1 7725 7786 -209 186 43 0 0 chr20 3978444 3978467 -68175415 + (CA)n Simple_repeat Simple_repeat 2 24 0 327 289 75 64 chr20 3978469 3978749 -68175133 + L1MEd LINE L1 1084 1366 -5050 336 123 49 74 chr20 3978750 3978831 -68175051 + MADE1 DNA Mariner 2 80 0 2288 77 7 17 chr20 3978852 3979150 -68174732 + AluSg1 SINE Alu 1 295 -14 236 35 0 0 chr20 3979162 3979191 -68174691 + MADE1 DNA Mariner 44 72 -8 263 292 44 15 chr20 3979227 3979364 -68174518 + L1MEd LINE L1 1252 1392 -5034 2127 62 52 72 chr20 3979422 3979727 -68174155 - AluSc SINE Alu -8 301 3 766 129 9 9 chr20 3979793 3979909 -68173973 + FLAM_C SINE Alu 1 116 -27 22 35 0 0 chr20 3979911 3979940 -68173942 + AT_rich Low_complexity Low_complexity 1 29 0 732 258 118 65 chr20 3979940 3980059 -68173823 + L1MEd LINE L1 1511 1622 -4804 938 194 92 10 chr20 3980059 3980265 -68173617 - MER58A DNA MER1_type 0 224 2 732 258 118 65 chr20 3980265 3981211 -68172671 + L1MEd LINE L1 1622 2781 -3645 2118 117 0 23 chr20 3981226 3981533 -68172349 - AluSx SINE Alu -12 300 1 1303 245 62 90 chr20 3981539 3981992 -68171890 - L1MC4 LINE L1 0 8042 7623 974 228 9 9 chr20 3981992 3982216 -68171666 - MER58A DNA MER1_type 0 224 1 1303 245 62 90 chr20 3982216 3982619 -68171263 - L1MC4 LINE L1 -419 7623 7210 684 227 122 25 chr20 3982723 3983084 -68170798 + L1MEd LINE L1 3151 3546 -2880 189 0 0 0 chr20 3983816 3983837 -68170045 + (TA)n Simple_repeat Simple_repeat 1 21 0 9459 34 14 0 chr20 3983838 3985767 -68168115 - L1PA4 LINE L1 0 6155 4211 915 74 0 0 chr20 3985772 3985893 -68167989 - L1P LINE L1 -6025 121 1 1038 260 91 37 chr20 3985948 3986409 -68167473 + L1MEd LINE L1 3764 4277 -2149 1859 164 10 0 chr20 3986409 3986708 -68167174 + AluJb SINE Alu 1 302 -10 1038 260 91 37 chr20 3986708 3986949 -68166933 + L1MEd LINE L1 4277 4504 -1922 757 298 121 86 chr20 3986970 3988106 -68165776 - L2 LINE L2 -1039 2275 1101 505 245 66 0 chr20 3988121 3988272 -68165610 - MER104 DNA Tc2 -16 164 4 240 185 15 31 chr20 3988275 3988340 -68165542 - MLT1L LTR MaLR -6 609 546 3297 58 9 0 chr20 3988456 3988888 -68164994 - L1PA7 LINE L1 -236 5918 5483 335 277 130 12 chr20 3988934 3989187 -68164695 + L1ME4a LINE L1 5813 6095 -26 1913 122 0 0 chr20 3989258 3989520 -68164362 + AluSx SINE Alu 38 299 -13 705 137 144 7 chr20 3990107 3990246 -68163636 + L1MB7 LINE L1 5864 6021 -163 525 158 50 8 chr20 3990250 3990370 -68163512 + L1MB7 LINE L1 6060 6184 0 398 222 202 30 chr20 3990401 3990604 -68163278 - L1MC5 LINE L1 -118 7843 7606 333 284 37 8 chr20 3990608 3990742 -68163140 - L1ME LINE L1 -302 5819 5682 258 32 0 0 chr20 3990742 3990773 -68163109 + (A)n Simple_repeat Simple_repeat 1 31 0 385 319 78 20 chr20 3991147 3991347 -68162535 + HAL1 LINE L1 1055 1267 -1237 719 153 7 44 chr20 3991347 3991508 -68162374 + L1PB2 LINE L1 6013 6151 0 250 275 50 17 chr20 3991567 3991687 -68162195 + HAL1 LINE L1 1516 1639 -868 2005 148 0 7 chr20 3992236 3992540 -68161342 - AluSx SINE Alu -10 302 1 229 114 91 0 chr20 3992683 3992727 -68161155 + L1MEc LINE L1 2424 2471 -3925 924 142 24 0 chr20 3992728 3992897 -68160985 + L1PA16 LINE L1 5876 6048 -118 225 121 52 52 chr20 3992899 3992957 -68160925 + L1MEc LINE L1 2954 3011 -3204 506 189 90 0 chr20 3992971 3993093 -68160789 + L1PA16 LINE L1 6034 6166 0 2077 250 34 13 chr20 3993100 3993540 -68160342 + L1M4 LINE L1 2346 2808 -3338 1539 160 21 50 chr20 3993540 3993822 -68160060 - AluJo SINE Alu -26 286 13 2077 250 34 13 chr20 3993822 3994089 -68159793 + L1M4 LINE L1 2808 3068 -3078 29630 89 13 16 chr20 3994089 3999826 -68154056 + L1PA7 LINE L1 736 6469 0 1768 243 115 38 chr20 3999793 3999833 -68154049 + L1ME2 LINE L1 5595 5631 -1018 * 2265 93 3 0 chr20 3999833 4000124 -68153758 + AluSg1 SINE Alu 1 292 -17 2002 134 100 3 chr20 4000124 4000474 -68153408 + L1PA15 LINE L1 5777 6160 -5 1768 243 115 38 chr20 4000474 4000552 -68153330 + L1ME2 LINE L1 5631 5702 -947 1861 176 3 7 chr20 4000552 4000854 -68153028 - AluJb SINE Alu -11 301 1 1768 243 115 38 chr20 4000854 4001559 -68152323 + L1ME2 LINE L1 5702 6645 -4 475 301 121 27 chr20 4001586 4001918 -68151964 + L1M4 LINE L1 2131 2493 -3653 198 80 60 0 chr20 4001958 4002008 -68151874 + (TA)n Simple_repeat Simple_repeat 2 54 0 1963 119 0 58 chr20 4002009 4002320 -68151562 - AluSg SINE Alu -17 293 1 588 288 49 18 chr20 4002967 4003388 -68150494 + L1MC4a LINE L1 5472 5904 -1904 234 0 0 0 chr20 4003538 4003564 -68150318 + (CAA)n Simple_repeat Simple_repeat 2 27 0 1188 164 4 44 chr20 4003664 4003890 -68149992 + AluJo SINE Alu 85 301 -11 508 250 190 33 chr20 4004378 4004510 -68149372 - LTR16A LTR ERVL -103 347 237 2532 52 0 0 chr20 4004510 4004801 -68149081 - AluY SINE Alu -20 291 1 508 250 190 33 chr20 4004801 4004968 -68148914 - LTR16A LTR ERVL -213 237 1 1244 283 50 6 chr20 4005084 4005445 -68148437 + MLT1J LTR MaLR 43 419 -92 224 163 0 20 chr20 4005515 4005564 -68148318 + (TA)n Simple_repeat Simple_repeat 1 48 0 582 185 8 39 chr20 4005564 4005694 -68148188 - FLAM_C SINE Alu -15 128 3 245 164 36 0 chr20 4005720 4005775 -68148107 - MLT1L LTR MaLR -414 201 145 795 301 158 12 chr20 4005821 4006383 -68147499 - L2 LINE L2 -2203 1111 468 926 203 143 45 chr20 4006428 4006694 -68147188 + AluJo SINE Alu 2 293 -19 48 60 0 0 chr20 4006873 4006956 -68146926 + AT_rich Low_complexity Low_complexity 1 83 0 405 0 0 0 chr20 4007328 4007373 -68146509 + (CA)n Simple_repeat Simple_repeat 2 46 0 2246 95 7 0 chr20 4007379 4007675 -68146207 - AluSq SINE Alu -15 298 1 4526 169 54 88 chr20 4007872 4007941 -68145941 - Charlie1 DNA MER1_type 0 2761 2691 2137 98 0 7 chr20 4007941 4008256 -68145626 - AluSx SINE Alu 0 313 1 4526 169 54 88 chr20 4008256 4009257 -68144625 - Charlie1 DNA MER1_type -70 2691 1658 3171 44 0 0 chr20 4009257 4009642 -68144240 - L1PA5 LINE L1 0 6154 5770 4526 169 54 88 chr20 4009642 4009700 -68144182 - Charlie1 DNA MER1_type -1103 1658 1600 1373 12 0 12 chr20 4009700 4009863 -68144019 - L1PA2 LINE L1 0 6155 5995 4526 169 54 88 chr20 4009863 4010236 -68143646 - Charlie1 DNA MER1_type -1161 1600 1 411 288 61 58 chr20 4010272 4010567 -68143315 + L2 LINE L2 2369 2664 -650 341 308 221 13 chr20 4010543 4010851 -68143031 + L2 LINE L2 2809 3180 -133 * 261 289 81 62 chr20 4010912 4011234 -68142648 - L2 LINE L2 -1389 1925 1598 198 330 22 60 chr20 4011556 4011738 -68142144 - L2 LINE L2 -2202 1112 938 * 258 333 108 9 chr20 4011721 4011832 -68142050 + L2 LINE L2 3151 3272 0 207 257 36 67 chr20 4012213 4012359 -68141523 + MIR SINE MIR 47 186 -66 192 77 0 0 chr20 4012502 4012528 -68141354 + (TG)n Simple_repeat Simple_repeat 1 26 0 2773 10 0 0 chr20 4012810 4013111 -68140771 - AluY SINE Alu -10 301 1 2018 171 12 0 chr20 4013128 4013472 -68140410 - MER7A DNA MER2_type 0 346 1 180 275 0 0 chr20 4014008 4014048 -68139834 - MIR SINE MIR -5 257 218 369 176 0 39 chr20 4014274 4014376 -68139506 + C-rich Low_complexity Low_complexity 4 101 0 1707 144 0 36 chr20 4014386 4014664 -68139218 - AluJo SINE Alu -44 268 1 861 250 98 47 chr20 4014782 4015078 -68138804 + L2 LINE L2 3003 3313 0 2222 109 0 10 chr20 4015165 4015467 -68138415 + AluSx SINE Alu 1 299 -13 1752 159 0 66 chr20 4015476 4015809 -68138073 + AluJb SINE Alu 1 311 -1 275 300 79 14 chr20 4016022 4016162 -68137720 - L1ME LINE L1 -418 5752 5604 243 0 0 0 chr20 4016222 4016249 -68137633 + (TGG)n Simple_repeat Simple_repeat 3 29 0 404 336 59 42 chr20 4016264 4016550 -68137332 + L1ME LINE L1 5339 5629 -492 26 0 0 0 chr20 4016786 4016812 -68137070 + AT_rich Low_complexity Low_complexity 1 26 0 2171 109 17 7 chr20 4016815 4017117 -68136765 + AluSq SINE Alu 5 309 -4 406 286 146 21 chr20 4017681 4017873 -68136009 - MIR SINE MIR 0 262 47 2201 100 0 3 chr20 4018116 4018417 -68135465 - AluSg SINE Alu -10 300 1 1256 199 101 38 chr20 4019957 4020045 -68133837 - MER2 DNA MER2_type -8 337 256 2134 101 3 3 chr20 4020045 4020343 -68133539 + AluSx SINE Alu 1 298 -14 1256 199 101 38 chr20 4020343 4020571 -68133311 - MER2 DNA MER2_type -89 256 1 274 231 56 28 chr20 4021102 4021210 -68132672 - L1ME4a LINE L1 -43 6078 5968 21 36 0 0 chr20 4021340 4021368 -68132514 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr20 4021531 4021554 -68132328 + AT_rich Low_complexity Low_complexity 1 23 0 1515 147 0 0 chr20 4021768 4021993 -68131889 + AluSq SINE Alu 1 225 -88 898 178 0 32 chr20 4021993 4022178 -68131704 - L1P LINE L1 -1290 4856 4678 475 230 35 18 chr20 4022597 4022710 -68131172 + L2 LINE L2 754 868 -2446 1386 218 62 87 chr20 4022724 4022931 -68130951 + LTR16A1 LTR ERVL 1 212 -245 457 206 124 0 chr20 4022931 4023028 -68130854 - MER81 DNA DNA -4 110 2 1386 218 62 87 chr20 4023028 4023289 -68130593 + LTR16A1 LTR ERVL 212 457 0 204 286 91 13 chr20 4023292 4023369 -68130513 + L2 LINE L2 880 962 -2352 555 306 43 14 chr20 4023376 4023585 -68130297 + L2 LINE L2 1290 1504 -1810 563 220 61 0 chr20 4023589 4023721 -68130161 + MER3 DNA MER1_type 1 140 -69 1870 238 88 13 chr20 4023723 4024248 -68129634 + L2 LINE L2 1931 2494 -820 1948 222 126 69 chr20 4024261 4024815 -68129067 - MLT1E LTR MaLR -6 587 2 251 235 0 0 chr20 4024822 4024873 -68129009 + L2 LINE L2 2507 2557 -757 507 345 132 20 chr20 4025126 4025765 -68128117 + L2 LINE L2 2583 3310 -3 2192 75 4 0 chr20 4026030 4026358 -68127524 - AluY SINE Alu 0 329 1 2550 19 7 10 chr20 4026715 4027024 -68126858 - AluY SINE Alu -3 308 1 1830 213 89 39 chr20 4029001 4029588 -68124294 + HAL1b LINE L1 351 966 -382 427 256 81 121 chr20 4029791 4030237 -68123645 - L1ME4a LINE L1 -96 6025 5598 318 259 173 7 chr20 4030163 4030302 -68123580 + HAL1b LINE L1 947 1108 -240 * 461 193 67 47 chr20 4030317 4030467 -68123415 + HAL1b LINE L1 1196 1348 0 373 172 32 11 chr20 4031757 4031850 -68122032 - L1MB3 LINE L1 -2 6181 6087 2693 108 31 7 chr20 4031858 4032283 -68121599 - L1MA4 LINE L1 -282 6018 5584 2138 78 0 7 chr20 4032760 4033070 -68120812 + AluSx SINE Alu 3 310 0 24 0 0 0 chr20 4033190 4033214 -68120668 + AT_rich Low_complexity Low_complexity 1 24 0 1621 158 14 7 chr20 4033454 4033745 -68120137 - AluJo SINE Alu -19 293 1 1227 198 20 4 chr20 4035576 4035824 -68118058 - L1MB3 LINE L1 0 6183 5932 362 302 47 13 chr20 4036036 4036185 -68117697 - L2 LINE L2 -220 3052 2899 2162 92 0 0 chr20 4036503 4036786 -68117096 + AluY SINE Alu 1 283 -28 1809 104 9 95 chr20 4037205 4037542 -68116340 + AluSx SINE Alu 1 308 -4 2075 109 6 10 chr20 4038336 4038647 -68115235 + AluSx SINE Alu 1 310 -2 239 239 90 45 chr20 4038981 4039048 -68114834 + L2 LINE L2 3185 3254 -18 2262 75 7 7 chr20 4039725 4040030 -68113852 + AluY SINE Alu 1 305 -6 1024 133 0 6 chr20 4040078 4040236 -68113646 + FRAM SINE Alu 1 153 -23 3249 204 19 13 chr20 4040252 4040879 -68113003 + MER82 DNA MER2_type 1 631 -22 2710 125 101 9 chr20 4040896 4041351 -68112531 - Tigger3(Golem) DNA MER2_type -2 3027 2531 253 260 0 0 chr20 4041355 4041405 -68112477 - Tigger3(Golem) DNA MER2_type -2969 60 11 1935 154 0 0 chr20 4041506 4041804 -68112078 + AluJo SINE Alu 1 298 -14 956 229 122 17 chr20 4041808 4042162 -68111720 - L1MC5 LINE L1 -311 7650 7260 * 1028 196 27 162 chr20 4042130 4042649 -68111233 - L1MC5 LINE L1 -902 7059 6611 1992 212 41 37 chr20 4042732 4042924 -68110958 - L1MC5 LINE L1 -1907 5901 5711 881 48 112 0 chr20 4042924 4043049 -68110833 - MER85 DNA T2_type 0 139 1 1992 212 41 37 chr20 4043049 4043417 -68110465 - L1MC5 LINE L1 -2097 5711 5339 512 358 87 22 chr20 4043428 4043844 -68110038 - L1MC5 LINE L1 -878 5268 4826 26 0 0 0 chr20 4043926 4043952 -68109930 + AT_rich Low_complexity Low_complexity 1 26 0 790 189 0 8 chr20 4044251 4044383 -68109499 + FLAM_A SINE Alu 1 131 -2 733 173 8 23 chr20 4044957 4045090 -68108792 + MER3 DNA MER1_type 1 131 -78 185 0 0 39 chr20 4045090 4045116 -68108766 + (TTTAA)n Simple_repeat Simple_repeat 1 25 0 21 0 0 0 chr20 4045474 4045495 -68108387 + AT_rich Low_complexity Low_complexity 1 21 0 44 20 0 0 chr20 4046015 4046066 -68107816 + GC_rich Low_complexity Low_complexity 1 51 0 232 215 39 39 chr20 4046162 4046292 -68107590 + (CGGG)n Simple_repeat Simple_repeat 3 132 0 591 278 97 38 chr20 4046526 4046896 -68106986 - L1ME4a LINE L1 0 6121 5730 326 254 74 8 chr20 4046955 4047077 -68106805 - L1ME4a LINE L1 -93 6028 5899 572 234 90 27 chr20 4047248 4047344 -68106538 - L2 LINE L2 -1114 2200 2112 2013 115 0 7 chr20 4047344 4047656 -68106226 + AluSx SINE Alu 1 310 0 572 234 90 27 chr20 4047656 4047746 -68106136 - L2 LINE L2 -1202 2112 2001 542 257 137 7 chr20 4047776 4048076 -68105806 - L1ME4a LINE L1 -757 5389 5051 683 183 0 23 chr20 4048202 4048377 -68105505 + CT-rich Low_complexity Low_complexity 2 172 0 180 0 0 0 chr20 4048381 4048401 -68105481 + (TTTCC)n Simple_repeat Simple_repeat 5 24 0 537 183 0 0 chr20 4048726 4048819 -68105063 - AluJo/FRAM SINE Alu -12 300 208 274 146 0 0 chr20 4048820 4048861 -68105021 - AluSp SINE Alu -129 174 134 2047 123 0 3 chr20 4048861 4049162 -68104720 - AluSx SINE Alu -12 300 1 29 0 0 0 chr20 4049162 4049191 -68104691 + AT_rich Low_complexity Low_complexity 1 29 0 2411 52 0 0 chr20 4049203 4049494 -68104388 + AluY SINE Alu 5 295 -16 803 232 34 23 chr20 4049494 4049671 -68104211 + AluJo/FRAM SINE Alu 134 312 0 607 131 0 0 chr20 4049687 4049771 -68104111 + AluSg/x SINE Alu 209 292 -18 395 125 219 31 chr20 4049772 4049868 -68104014 - L1MB8 LINE L1 -10 6168 6055 784 81 16 49 chr20 4049868 4049991 -68103891 - AluSg/x SINE Alu -10 299 181 531 61 0 0 chr20 4050032 4050098 -68103784 + Alu SINE Alu 2 67 -243 1813 129 4 0 chr20 4050098 4050361 -68103521 - AluSq SINE Alu -49 264 1 970 102 0 0 chr20 4050361 4050489 -68103393 - AluJb SINE Alu -176 136 9 1563 188 10 0 chr20 4050894 4051192 -68102690 + AluJb SINE Alu 3 303 -9 2171 121 0 0 chr20 4051394 4051700 -68102182 - AluSx SINE Alu -1 311 6 1286 198 0 54 chr20 4051814 4051952 -68101930 - AluJo SINE Alu -11 301 157 2092 109 0 3 chr20 4051952 4052256 -68101626 - AluSg SINE Alu -6 304 2 1286 198 0 54 chr20 4052256 4052430 -68101452 - AluJo SINE Alu -155 157 6 1004 146 99 4 chr20 4052434 4052667 -68101215 + MER33 DNA MER1_type 39 293 -31 2210 93 3 0 chr20 4052667 4052967 -68100915 + AluSx SINE Alu 1 301 -11 292 40 40 20 chr20 4053064 4053114 -68100768 + (TTTTA)n Simple_repeat Simple_repeat 1 51 0 6821 17 1 0 chr20 4053114 4053876 -68100006 - L1PA3 LINE L1 -24 6131 5369 2102 98 7 3 chr20 4054571 4054878 -68099004 + AluSg SINE Alu 1 308 -2 300 261 45 11 chr20 4055298 4055386 -68098496 + MIR SINE MIR 55 145 -117 338 207 0 45 chr20 4055834 4055945 -68097937 + CT-rich Low_complexity Low_complexity 3 108 0 198 0 0 0 chr20 4057807 4057829 -68096053 + (T)n Simple_repeat Simple_repeat 1 22 0 358 266 117 33 chr20 4058210 4058424 -68095458 - Charlie8 DNA MER1_type -2185 232 1 378 0 0 0 chr20 4058976 4059018 -68094864 + (TG)n Simple_repeat Simple_repeat 1 42 0 204 293 84 89 chr20 4063585 4063978 -68089904 + L2 LINE L2 2379 2769 -545 219 88 0 0 chr20 4065282 4065316 -68088566 + (TGGA)n Simple_repeat Simple_repeat 2 35 0 2160 115 0 0 chr20 4065926 4066222 -68087660 + AluSg SINE Alu 1 296 -14 189 190 0 103 chr20 4066502 4066560 -68087322 - MIR SINE MIR -94 168 117 190 264 23 46 chr20 4066986 4067073 -68086809 - MIR SINE MIR -59 149 65 205 250 21 0 chr20 4067219 4067267 -68086615 - L2 LINE L2 -15 3257 3209 1348 224 103 3 chr20 4067948 4068296 -68085586 - L1ME3 LINE L1 0 6162 5780 1329 114 0 0 chr20 4068305 4068481 -68085401 - AluSq SINE Alu -4 309 134 2271 107 0 3 chr20 4068481 4068772 -68085110 - AluSg SINE Alu -14 296 7 21 0 0 0 chr20 4068790 4068811 -68085071 + AT_rich Low_complexity Low_complexity 1 21 0 1615 118 78 0 chr20 4068811 4069081 -68084801 + AluSp SINE Alu 1 291 -22 216 0 0 0 chr20 4069081 4069105 -68084777 + (TA)n Simple_repeat Simple_repeat 2 25 0 1229 171 18 40 chr20 4069107 4069335 -68084547 - AluJb SINE Alu -4 308 86 1952 161 0 37 chr20 4069342 4069666 -68084216 - AluJo SINE Alu 0 312 1 476 206 10 0 chr20 4069749 4069846 -68084036 - L1ME1 LINE L1 -31 6135 6038 481 262 60 0 chr20 4069884 4070033 -68083849 - L1ME3 LINE L1 -512 5652 5495 2334 108 0 0 chr20 4070043 4070350 -68083532 + AluSx SINE Alu 2 308 -4 2397 76 0 13 chr20 4070350 4070653 -68083229 + AluY SINE Alu 1 299 -12 606 259 7 0 chr20 4071816 4071959 -68081923 + MIR SINE MIR 82 225 -37 654 227 0 0 chr20 4071961 4072089 -68081793 + FLAM_C SINE Alu 1 128 -5 2579 59 0 3 chr20 4072093 4072400 -68081482 + AluY SINE Alu 1 306 -5 1415 162 55 28 chr20 4072601 4072891 -68080991 + AluJo SINE Alu 1 298 -14 2011 148 3 16 chr20 4073247 4073557 -68080325 + AluJb SINE Alu 1 306 -6 805 207 0 55 chr20 4073668 4073832 -68080050 + FAM SINE Alu 1 155 -30 432 0 0 0 chr20 4073836 4073884 -68079998 + (TAAA)n Simple_repeat Simple_repeat 2 49 0 1815 166 7 17 chr20 4073937 4074057 -68079825 + AluJb SINE Alu 1 121 -191 2391 46 43 0 chr20 4074057 4074338 -68079544 - AluY SINE Alu -17 294 2 1815 166 7 17 chr20 4074338 4074518 -68079364 + AluJb SINE Alu 121 298 -14 219 36 0 0 chr20 4074816 4074844 -68079038 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 2198 122 7 0 chr20 4074972 4075268 -68078614 + AluSx SINE Alu 1 298 -14 208 213 27 107 chr20 4075464 4075539 -68078343 - MIR SINE MIR -9 253 185 203 310 55 41 chr20 4075880 4076025 -68077857 + L2 LINE L2 2913 3059 -213 2435 31 45 3 chr20 4076478 4076766 -68077116 - AluY SINE Alu -11 300 1 1884 246 53 28 chr20 4076846 4077283 -68076599 - L1ME3A LINE L1 -8 6162 5706 2398 94 0 3 chr20 4077283 4077592 -68076290 + AluSq SINE Alu 1 308 -5 1884 246 53 28 chr20 4077592 4077720 -68076162 - L1ME3A LINE L1 -464 5706 5583 1084 186 27 9 chr20 4078660 4078880 -68075002 + AluJb SINE Alu 1 224 -88 216 0 0 0 chr20 4078880 4078904 -68074978 + (A)n Simple_repeat Simple_repeat 1 24 0 189 121 0 0 chr20 4079020 4079053 -68074829 + (TGG)n Simple_repeat Simple_repeat 1 33 0 235 329 13 0 chr20 4079499 4079578 -68074304 + MER5A DNA MER1_type 92 171 -18 22 35 0 0 chr20 4079731 4079760 -68074122 + GC_rich Low_complexity Low_complexity 1 29 0 1021 238 75 79 chr20 4080541 4080848 -68073034 - L1MC4 LINE L1 -55 7987 7681 2170 110 20 3 chr20 4080848 4081149 -68072733 - AluSx SINE Alu -6 306 1 1021 238 75 79 chr20 4081149 4081333 -68072549 - L1MC4 LINE L1 -361 7681 7498 219 125 0 0 chr20 4081336 4081376 -68072506 + (T)n Simple_repeat Simple_repeat 1 40 0 891 242 12 48 chr20 4081984 4082232 -68071650 - MIR SINE MIR -4 258 20 2529 51 0 10 chr20 4082737 4083033 -68070849 - AluY SINE Alu -18 293 1 446 290 15 8 chr20 4083189 4083320 -68070562 + MIR SINE MIR 71 202 -60 2215 118 3 0 chr20 4084133 4084430 -68069452 + AluSx SINE Alu 1 298 -14 348 290 108 6 chr20 4085125 4085301 -68068581 - LTR16C LTR ERVL -144 347 154 183 234 39 65 chr20 4086257 4086334 -68067548 - L2 LINE L2 -4 3309 3235 2078 112 11 0 chr20 4086746 4087043 -68066839 - AluY SINE Alu 0 300 1 2425 115 0 0 chr20 4087232 4087544 -68066338 - AluSx SINE Alu 0 312 1 4845 133 17 35 chr20 4087681 4088570 -68065312 - L1MC1 LINE L1 0 6333 5461 1173 127 6 0 chr20 4088570 4088735 -68065147 - AluSg/x SINE Alu -11 301 136 2257 123 0 0 chr20 4088737 4089038 -68064844 - AluSx SINE Alu -11 301 1 2490 155 26 90 chr20 4089038 4089392 -68064490 - L1MC1 LINE L1 -743 5403 5028 2050 130 17 13 chr20 4089392 4089692 -68064190 + AluJo SINE Alu 1 301 -11 2490 155 26 90 chr20 4089692 4089709 -68064173 - L1MC1 LINE L1 -1118 5028 5011 2475 73 7 0 chr20 4089709 4090010 -68063872 - AluSp SINE Alu -10 303 1 2490 155 26 90 chr20 4090010 4090386 -68063496 - L1MC1 LINE L1 -1135 5011 4612 2087 149 7 0 chr20 4090386 4090687 -68063195 - AluSx SINE Alu -9 303 1 2490 155 26 90 chr20 4090687 4090709 -68063173 - L1MC1 LINE L1 -1534 4612 4772 2575 67 0 13 chr20 4090709 4091022 -68062860 - AluY SINE Alu -2 309 1 2490 155 26 90 chr20 4091022 4091094 -68062788 - L1MC1 LINE L1 -1373 4773 4698 261 54 0 0 chr20 4091094 4091117 -68062765 + (TA)n Simple_repeat Simple_repeat 2 27 -11 248 0 31 0 chr20 4091117 4091149 -68062733 + (TG)n Simple_repeat Simple_repeat 2 34 0 261 54 0 0 chr20 4091149 4091162 -68062720 + (TA)n Simple_repeat Simple_repeat 26 38 0 1388 171 102 4 chr20 4091162 4091408 -68062474 - AluJo SINE Alu -8 304 35 2239 117 10 3 chr20 4091439 4091739 -68062143 + AluSx SINE Alu 1 302 -10 2542 80 0 3 chr20 4091739 4092050 -68061832 + AluY SINE Alu 1 311 0 2122 145 0 3 chr20 4092097 4092393 -68061489 - AluSx SINE Alu -15 297 3 2367 91 0 3 chr20 4092399 4092696 -68061186 - AluSc SINE Alu -13 296 1 640 203 0 43 chr20 4092699 4092837 -68061045 - AluJo/FLAM SINE Alu -169 133 2 1768 224 41 24 chr20 4092840 4093375 -68060507 - L1 LINE L1 -1818 4328 3695 762 81 0 0 chr20 4093375 4093486 -68060396 + (TTCC)n Simple_repeat Simple_repeat 2 112 0 654 123 0 9 chr20 4093487 4093593 -68060289 + AluSg/x SINE Alu 70 174 -138 1963 90 0 8 chr20 4093595 4093839 -68060043 - AluSx SINE Alu -70 242 1 257 301 65 8 chr20 4093843 4093966 -68059916 - L1MC/D LINE L1 -1921 5887 5758 2435 94 7 0 chr20 4094068 4094377 -68059505 + AluSp SINE Alu 1 311 -2 463 335 93 40 chr20 4094385 4094686 -68059196 - L1 LINE L1 -2987 3159 2843 2327 108 0 3 chr20 4094692 4094988 -68058894 + AluSq SINE Alu 1 295 -18 450 297 103 65 chr20 4095006 4095096 -68058786 - HAL1b LINE L1 -964 384 299 2494 65 10 7 chr20 4095096 4095404 -68058478 - AluSp SINE Alu -4 309 1 450 297 103 65 chr20 4095404 4095473 -68058409 - HAL1b LINE L1 -1049 299 234 2051 103 0 0 chr20 4095473 4095735 -68058147 - AluSc SINE Alu -12 297 36 450 297 103 65 chr20 4095735 4095864 -68058018 - HAL1b LINE L1 -1114 234 84 739 163 8 0 chr20 4096544 4096667 -68057215 + FLAM_C SINE Alu 1 124 -9 1786 147 0 99 chr20 4096683 4096870 -68057012 - AluSx SINE Alu -11 301 160 2400 79 33 0 chr20 4096870 4097173 -68056709 - AluSp SINE Alu 0 313 1 1786 147 0 99 chr20 4097173 4097319 -68056563 - AluSx SINE Alu -152 160 1 563 165 43 0 chr20 4097328 4097443 -68056439 - FLAM_A SINE Alu 0 142 23 21 0 0 0 chr20 4097452 4097473 -68056409 + AT_rich Low_complexity Low_complexity 1 21 0 2372 91 0 3 chr20 4097487 4097784 -68056098 + AluSx SINE Alu 1 296 -16 637 223 41 30 chr20 4097793 4097896 -68055986 - L1MB4 LINE L1 0 6180 6080 2421 107 0 0 chr20 4097896 4098205 -68055677 - AluSq SINE Alu -4 309 1 637 223 41 30 chr20 4098205 4098330 -68055552 - L1MB4 LINE L1 -100 6080 5957 226 299 83 42 chr20 4098690 4098834 -68055048 + L2 LINE L2 3163 3312 -1 2077 127 27 7 chr20 4099089 4099434 -68054448 + AluJb SINE Alu 1 351 0 1922 122 4 0 chr20 4099521 4099776 -68054106 + AluSx SINE Alu 1 256 -56 1881 112 37 44 chr20 4099876 4100172 -68053710 + AluSx SINE Alu 1 294 -18 960 194 10 41 chr20 4100209 4100335 -68053547 + AluJo SINE Alu 23 142 -170 2535 57 3 0 chr20 4100335 4100632 -68053250 + AluY SINE Alu 1 298 -13 960 194 10 41 chr20 4100632 4100701 -68053181 + AluJo SINE Alu 142 212 -100 1511 169 4 28 chr20 4100740 4100994 -68052888 - AluJb SINE Alu -64 248 1 337 256 6 106 chr20 4100996 4101084 -68052798 + L1ME3 LINE L1 6019 6114 -48 2223 75 7 55 chr20 4101084 4101391 -68052491 + AluSx SINE Alu 16 307 -5 2499 80 0 0 chr20 4101396 4101695 -68052187 + AluSc SINE Alu 1 299 -10 337 256 6 106 chr20 4101695 4101760 -68052122 + L1ME3 LINE L1 6118 6162 0 1201 129 12 0 chr20 4102545 4102708 -68051174 - AluSg/x SINE Alu -22 290 126 602 214 0 55 chr20 4102852 4102997 -68050885 + FLAM_A SINE Alu 6 142 0 1263 216 176 33 chr20 4103433 4103528 -68050354 - L1MC4a LINE L1 -6 7802 7722 2281 118 0 0 chr20 4103528 4103833 -68050049 - AluSq SINE Alu -8 305 1 1263 216 176 33 chr20 4103833 4104024 -68049858 - L1MC4a LINE L1 -86 7722 7560 679 198 71 85 chr20 4104024 4104072 -68049810 + MER3 DNA MER1_type 1 48 -161 2295 119 3 0 chr20 4104072 4104382 -68049500 + AluSp SINE Alu 1 311 -2 679 198 71 85 chr20 4104382 4104447 -68049435 + MER3 DNA MER1_type 48 112 -97 2533 93 0 0 chr20 4104447 4104759 -68049123 + AluSx SINE Alu 1 312 0 679 198 71 85 chr20 4104759 4104856 -68049026 + MER3 DNA MER1_type 112 209 0 1263 216 176 33 chr20 4104856 4104961 -68048921 - L1MC4a LINE L1 -248 7560 7354 2612 80 0 0 chr20 4105318 4105629 -68048253 + AluSx SINE Alu 1 311 -1 206 176 0 0 chr20 4105919 4105953 -68047929 - MIR SINE MIR -8 254 221 2322 92 3 0 chr20 4107589 4107881 -68046001 - AluSx SINE Alu -19 293 1 1150 261 116 62 chr20 4108193 4108690 -68045192 + L2 LINE L2 2294 2763 -550 2205 108 20 0 chr20 4108690 4108986 -68044896 - AluSq SINE Alu -11 302 1 1150 261 116 62 chr20 4108986 4109360 -68044522 + L2 LINE L2 2763 3250 -63 2649 49 10 0 chr20 4109479 4109786 -68044096 + AluY SINE Alu 1 310 -1 2294 69 31 3 chr20 4109798 4110087 -68043795 + AluSp SINE Alu 2 298 -15 2605 63 0 0 chr20 4110087 4110388 -68043494 + AluY SINE Alu 1 301 -10 1972 103 58 14 chr20 4110400 4110521 -68043361 + AluSx SINE Alu 1 115 -197 2099 142 0 22 chr20 4110521 4110839 -68043043 + AluSx SINE Alu 1 311 -1 1972 103 58 14 chr20 4110839 4111008 -68042874 + AluSx SINE Alu 115 304 -8 196 235 247 0 chr20 4111057 4111142 -68042740 - MIR SINE MIR -65 143 38 2347 106 3 7 chr20 4111156 4111457 -68042425 + AluSp SINE Alu 1 300 -13 2620 56 0 0 chr20 4111473 4111776 -68042106 - AluY SINE Alu -8 303 1 694 128 0 0 chr20 4112173 4112282 -68041600 - FLAM_A SINE Alu -4 138 30 2387 89 0 7 chr20 4112317 4112619 -68041263 - AluSg1 SINE Alu -7 302 3 2498 40 7 3 chr20 4112687 4112985 -68040897 + AluY SINE Alu 1 299 -12 1573 188 18 0 chr20 4112993 4113269 -68040613 + AluJo SINE Alu 1 281 -31 2166 97 7 36 chr20 4113270 4113579 -68040303 - AluSp SINE Alu -13 300 1 195 42 0 0 chr20 4113596 4113620 -68040262 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2202 108 7 13 chr20 4113622 4113927 -68039955 + AluSx SINE Alu 1 303 -9 2529 70 0 0 chr20 4114368 4114666 -68039216 - AluSc SINE Alu -7 302 5 1619 108 4 26 chr20 4115246 4115478 -68038404 - AluSg/x SINE Alu -4 306 80 417 115 0 0 chr20 4115478 4115539 -68038343 - Alu SINE Alu -16 295 235 2591 58 0 0 chr20 4115539 4115834 -68038048 - AluY SINE Alu -15 296 2 2054 111 42 3 chr20 4115835 4116124 -68037758 - AluSg SINE Alu -10 300 1 2494 83 0 6 chr20 4116233 4116547 -68037335 + AluSx SINE Alu 1 312 0 413 287 195 11 chr20 4116724 4116898 -68036984 + MIR SINE MIR 29 234 -28 478 303 0 19 chr20 4117401 4117556 -68036326 + MIR SINE MIR 30 181 -81 255 303 13 0 chr20 4117658 4117734 -68036148 + CT-rich Low_complexity Low_complexity 2 78 0 2175 90 47 13 chr20 4117879 4118179 -68035703 + AluY SINE Alu 1 310 -1 1999 153 33 0 chr20 4118270 4118571 -68035311 - AluJo SINE Alu -1 311 1 298 185 25 12 chr20 4118584 4118665 -68035217 + CT-rich Low_complexity Low_complexity 3 84 0 2425 73 0 16 chr20 4118707 4119010 -68034872 + AluSg SINE Alu 1 298 -12 2512 51 0 3 chr20 4119305 4119597 -68034285 - AluY SINE Alu -20 291 1 862 112 0 0 chr20 4119717 4119833 -68034049 - AluSg/x SINE Alu -21 291 176 2424 90 0 0 chr20 4119854 4120155 -68033727 - AluSp SINE Alu -12 301 1 2274 113 0 0 chr20 4120155 4120455 -68033427 - AluSg SINE Alu -10 300 1 1961 52 12 16 chr20 4120464 4120715 -68033167 - AluY SINE Alu -3 308 59 206 360 137 13 chr20 4122050 4122203 -68031679 - L2 LINE L2 -190 3082 2911 2299 89 7 0 chr20 4122208 4122517 -68031365 + AluSx SINE Alu 1 311 0 2372 69 14 0 chr20 4123087 4123378 -68030504 + AluSp SINE Alu 2 296 -17 2400 94 7 0 chr20 4123378 4123685 -68030197 + AluSx SINE Alu 1 309 -3 195 129 0 0 chr20 4124272 4124303 -68029579 + (A)n Simple_repeat Simple_repeat 1 31 0 2113 89 50 0 chr20 4124359 4124640 -68029242 + AluSq SINE Alu 2 296 -17 705 147 23 0 chr20 4124768 4124897 -68028985 - FLAM_A SINE Alu -1 132 1 257 167 0 0 chr20 4125603 4125645 -68028237 - AluSp SINE Alu -133 170 129 2152 110 7 3 chr20 4126174 4126475 -68027407 - AluSq SINE Alu -11 302 1 605 198 25 0 chr20 4127828 4127949 -68025933 - FLAM_C SINE Alu -8 125 2 1112 171 52 0 chr20 4128101 4128294 -68025588 - AluSq SINE Alu -110 203 1 21 0 0 0 chr20 4128297 4128318 -68025564 + AT_rich Low_complexity Low_complexity 1 21 0 1366 123 31 40 chr20 4128318 4128546 -68025336 - AluSx SINE Alu -86 226 1 1560 167 84 0 chr20 4128549 4128824 -68025058 - AluJb SINE Alu -14 298 1 351 271 76 0 chr20 4128825 4128943 -68024939 - MLT1B LTR MaLR -263 127 1 2387 85 3 0 chr20 4129107 4129401 -68024481 - AluSp SINE Alu -16 297 3 1413 216 35 47 chr20 4129401 4129803 -68024079 + MLT2C1 LTR ERVL 1 397 0 1405 131 0 10 chr20 4129891 4130089 -68023793 + AluSg/x SINE Alu 101 296 -16 1772 237 25 3 chr20 4130089 4130452 -68023430 + ERVL LTR ERVL 347 717 -5047 237 188 62 31 chr20 4130515 4130579 -68023303 - AluS SINE Alu -240 68 3 1078 192 103 48 chr20 4130582 4130873 -68023009 - MLT1A1 LTR MaLR -58 307 1 395 183 0 0 chr20 4130873 4130944 -68022938 + ERVL LTR ERVL 3883 3953 -1811 189 0 0 0 chr20 4131044 4131065 -68022817 + (TAAA)n Simple_repeat Simple_repeat 3 23 0 481 274 107 13 chr20 4131065 4131299 -68022583 + L1ME4a LINE L1 5865 6120 -1 861 143 0 0 chr20 4132047 4132180 -68021702 + FLAM_C SINE Alu 1 133 0 348 259 43 76 chr20 4132344 4132484 -68021398 - L3 LINE CR1 -64 1513 1379 2007 96 70 0 chr20 4132484 4132755 -68021127 + AluY SINE Alu 1 290 -21 348 259 43 76 chr20 4132755 4132799 -68021083 - L3 LINE CR1 -198 1379 1335 23 33 0 0 chr20 4133218 4133248 -68020634 + AT_rich Low_complexity Low_complexity 1 30 0 2320 172 19 28 chr20 4133333 4133798 -68020084 + LOR1b LTR ERV1 1 461 0 2444 80 0 32 chr20 4134404 4134715 -68019167 - AluSg SINE Alu -9 301 1 289 309 44 16 chr20 4134776 4135040 -68018842 - L1ME3A LINE L1 -222 5948 5671 332 220 35 165 chr20 4135050 4135122 -68018760 - MER112 DNA MER1_type -6 254 174 378 0 0 0 chr20 4135122 4135164 -68018718 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 332 220 35 165 chr20 4135164 4135291 -68018591 - MER112 DNA MER1_type -86 174 81 443 313 75 0 chr20 4135331 4135491 -68018391 - L1ME3A LINE L1 -514 5648 5477 278 314 24 0 chr20 4135562 4135686 -68018196 - HAL1 LINE L1 -923 1584 1458 10706 147 28 11 chr20 4135814 4138845 -68015037 + L1MA2 LINE L1 3218 6304 0 21 57 0 0 chr20 4138932 4138967 -68014915 + AT_rich Low_complexity Low_complexity 1 35 0 4502 171 27 32 chr20 4139291 4139626 -68014256 + L1MB5 LINE L1 5149 5484 -690 2354 80 0 29 chr20 4139626 4139961 -68013921 + AluSc SINE Alu 1 309 0 4502 171 27 32 chr20 4139961 4140092 -68013790 + L1MB5 LINE L1 5484 5614 -560 474 56 11 124 chr20 4140092 4140142 -68013740 - MADE1 DNA Mariner 0 80 43 2354 71 3 14 chr20 4140142 4140439 -68013443 + AluY SINE Alu 1 294 -17 474 56 11 124 chr20 4140439 4140477 -68013405 - MADE1 DNA Mariner -37 43 2 4502 171 27 32 chr20 4140477 4141038 -68012844 + L1MB5 LINE L1 5614 6168 -6 1696 149 88 0 chr20 4141042 4141371 -68012511 + L1MB8 LINE L1 5550 5907 -271 804 97 8 32 chr20 4141476 4141600 -68012282 + LTR12 LTR ERV1 153 273 -441 398 224 10 0 chr20 4141603 4141701 -68012181 + LTR30 LTR ERV1 544 642 -80 2495 83 0 0 chr20 4141701 4142028 -68011854 + pTR5 LTR ERV1 66 392 -2046 265 98 115 66 chr20 4142052 4142113 -68011769 - L1MEd LINE L1 -5732 387 324 2829 181 79 140 chr20 4142120 4142824 -68011058 + MER21A LTR ERV1 12 757 -174 1955 163 0 3 chr20 4142824 4143125 -68010757 + AluJo SINE Alu 1 300 -12 2829 181 79 140 chr20 4143125 4143244 -68010638 + MER21A LTR ERV1 757 770 -161 1911 141 20 23 chr20 4143244 4143543 -68010339 + AluSx SINE Alu 1 298 -14 2829 181 79 140 chr20 4143543 4143691 -68010191 + MER21A LTR ERV1 770 925 -6 2110 212 27 93 chr20 4146704 4147078 -68006804 - L1MA5 LINE L1 0 6178 5882 1748 159 0 11 chr20 4147078 4147355 -68006527 - AluSx SINE Alu -36 276 3 2110 212 27 93 chr20 4147355 4147758 -68006124 - L1MA5 LINE L1 -296 5882 5454 * 3247 157 11 3 chr20 4147757 4148323 -68005559 - L1MA5 LINE L1 -1134 5012 4443 638 218 59 63 chr20 4149770 4150009 -68003873 + LTR37A LTR ERV1 67 304 -122 2260 116 3 0 chr20 4150064 4150357 -68003525 - AluSx SINE Alu -18 294 1 2435 71 3 0 chr20 4150462 4150757 -68003125 - AluY SINE Alu -15 296 1 515 250 45 34 chr20 4150767 4150943 -68002939 - MIR SINE MIR -43 219 42 905 138 0 0 chr20 4151500 4151623 -68002259 - FLAM_C SINE Alu -20 123 1 461 106 115 0 chr20 4151852 4151956 -68001926 + AluYb8 SINE Alu 10 125 -193 9111 177 79 23 chr20 4152084 4153811 -68000071 - L1M1 LINE L1 -5719 1846 24 25 0 0 0 chr20 4153816 4153841 -68000041 + AT_rich Low_complexity Low_complexity 1 25 0 647 269 63 86 chr20 4154688 4154844 -67999038 + L1ME4a LINE L1 5408 5566 -555 198 103 0 0 chr20 4154844 4154873 -67999009 + (TG)n Simple_repeat Simple_repeat 2 30 0 647 269 63 86 chr20 4154873 4155158 -67998724 + L1ME4a LINE L1 5566 5839 -282 714 264 83 74 chr20 4156055 4156624 -67997258 - HAL1 LINE L1 -943 1564 991 558 167 0 39 chr20 4156677 4156779 -67997103 - U6 snRNA snRNA 0 107 10 302 313 62 53 chr20 4157055 4157282 -67996600 - L1MEd LINE L1 -5446 673 445 2085 120 38 0 chr20 4157835 4158127 -67995755 - AluSx SINE Alu -7 305 3 21 57 0 0 chr20 4158891 4158926 -67994956 + AT_rich Low_complexity Low_complexity 1 35 0 285 335 73 33 chr20 4159685 4159930 -67993952 - L3 LINE CR1 -12 1565 1311 1444 235 67 45 chr20 4160137 4160600 -67993282 + HsTC2a DNA Tc2 11 483 -261 17007 127 32 120 chr20 4160601 4164557 -67989325 + L1P LINE L1 12 3621 -2525 1829 177 7 0 chr20 4164844 4165143 -67988739 + AluJo SINE Alu 1 301 -11 2422 83 3 3 chr20 4165359 4165661 -67988221 + AluSc SINE Alu 1 302 -7 2339 102 3 3 chr20 4166120 4166433 -67987449 - AluSp SINE Alu 0 313 1 201 255 82 117 chr20 4166567 4166632 -67987250 + L2 LINE L2 1792 1858 -1456 2150 110 14 0 chr20 4166632 4166923 -67986959 - AluSx SINE Alu -17 295 1 201 255 82 117 chr20 4166923 4167053 -67986829 + L2 LINE L2 1858 1980 -1334 191 311 16 0 chr20 4167658 4167719 -67986163 - L2 LINE L2 -1346 1968 1907 523 185 11 0 chr20 4167720 4167812 -67986070 - Tigger7 DNA MER2_type -5 2486 2394 1408 171 57 0 chr20 4167813 4168041 -67985841 - Tigger7 DNA MER2_type -2222 265 25 405 250 61 46 chr20 4168041 4168237 -67985645 - L1M4 LINE L1 -2057 4089 3891 2379 78 0 0 chr20 4168246 4168540 -67985342 - AluSx SINE Alu -18 294 1 2483 132 57 43 chr20 4168666 4169158 -67984724 + LTR8A LTR ERV1 83 581 -146 1303 118 11 21 chr20 4169158 4169345 -67984537 + AluY SINE Alu 1 185 -126 2566 138 37 24 chr20 4169468 4170012 -67983870 + L1 LINE L1 4136 4686 -1460 2430 97 0 0 chr20 4170012 4170322 -67983560 - AluSg SINE Alu 0 310 1 552 200 5 116 chr20 4170322 4170537 -67983345 + L1MD2 LINE L1 6038 6228 -131 * 908 151 104 0 chr20 4170531 4170723 -67983159 + L1PA16 LINE L1 5938 6149 -17 353 246 108 0 chr20 4170737 4170867 -67983015 + L1MD2 LINE L1 6214 6357 -2 212 300 146 27 chr20 4172000 4172110 -67981772 + L3 LINE CR1 1231 1353 -224 244 263 26 9 chr20 4172121 4172235 -67981647 + (TA)n Simple_repeat Simple_repeat 2 117 0 2420 77 0 3 chr20 4172267 4172565 -67981317 - AluSc SINE Alu -11 298 2 22 0 0 0 chr20 4172570 4172592 -67981290 + AT_rich Low_complexity Low_complexity 1 22 0 263 229 36 6 chr20 4172596 4172762 -67981120 + (TA)n Simple_repeat Simple_repeat 2 172 0 2088 124 3 10 chr20 4173204 4173502 -67980380 - AluSx SINE Alu -16 296 1 1056 215 124 43 chr20 4173686 4174058 -67979824 + MER92B LTR ERV1 2 403 -233 436 213 0 0 chr20 4174077 4174171 -67979711 + MER92B LTR ERV1 543 636 0 25 0 0 0 chr20 4174353 4174378 -67979504 + AT_rich Low_complexity Low_complexity 1 25 0 21 36 0 0 chr20 4174818 4174846 -67979036 + AT_rich Low_complexity Low_complexity 1 28 0 534 270 60 75 chr20 4174964 4175216 -67978666 + MER102b DNA MER1_type 79 326 -15 442 236 156 47 chr20 4175492 4175704 -67978178 + MLT1H LTR MaLR 119 353 -196 312 179 40 11 chr20 4175749 4175855 -67978027 + MLT1H LTR MaLR 437 539 -10 189 0 0 0 chr20 4176026 4176047 -67977835 + (TG)n Simple_repeat Simple_repeat 2 22 0 300 290 153 6 chr20 4177342 4177518 -67976364 + MLT1K LTR MaLR 277 478 -110 2291 86 0 3 chr20 4177580 4177870 -67976012 + AluSx SINE Alu 1 289 -23 626 218 67 27 chr20 4178036 4178261 -67975621 - LTR16A1 LTR ERVL 0 457 224 362 228 24 31 chr20 4178316 4178443 -67975439 - LTR16A1 LTR ERVL -331 126 1 686 163 8 8 chr20 4178539 4178668 -67975214 + FRAM SINE Alu 40 168 -8 235 91 23 45 chr20 4178721 4178765 -67975117 - MLT1J LTR MaLR -378 133 91 198 272 112 32 chr20 4178819 4178944 -67974938 - MIR3 SINE MIR -41 167 33 1709 161 67 85 chr20 4180841 4181277 -67972605 + MSTA LTR MaLR 1 428 0 531 234 133 37 chr20 4181496 4181684 -67972198 - MIR SINE MIR -12 250 45 718 289 118 22 chr20 4182025 4182527 -67971355 + Charlie7 DNA MER1_type 12 561 -2051 353 307 125 66 chr20 4182899 4183218 -67970664 - HAL1 LINE L1 -1329 1178 841 2271 87 0 10 chr20 4183684 4183982 -67969900 - AluSq SINE Alu -13 300 6 2055 106 6 48 chr20 4184019 4184330 -67969552 - AluSq SINE Alu -15 298 1 204 67 0 0 chr20 4184584 4184614 -67969268 + (T)n Simple_repeat Simple_repeat 1 30 0 182 340 125 43 chr20 4185365 4185756 -67968126 - L2 LINE L2 -339 2975 2553 295 350 43 21 chr20 4185768 4185954 -67967928 - L2 LINE L2 -1285 2029 1840 216 292 99 109 chr20 4186240 4186432 -67967450 + L2 LINE L2 2632 2821 -493 1687 179 3 27 chr20 4186975 4187271 -67966611 + AluJo SINE Alu 1 289 -23 329 303 126 11 chr20 4187561 4187736 -67966146 - MIR SINE MIR -4 258 64 200 297 90 9 chr20 4188097 4188208 -67965674 + L2 LINE L2 2633 2752 -562 964 202 112 64 chr20 4188221 4188578 -67965304 + MLT1A2 LTR MaLR 1 374 0 2370 98 0 0 chr20 4188730 4189025 -67964857 - AluSq SINE Alu -18 295 1 208 315 18 45 chr20 4189074 4189185 -67964697 + L2 LINE L2 2988 3095 -218 1813 156 0 48 chr20 4189222 4189536 -67964346 - AluSx SINE Alu -13 299 1 1332 203 103 32 chr20 4189540 4189910 -67963972 + MLT1D LTR MaLR 108 503 -2 233 173 62 12 chr20 4192274 4192355 -67961527 + Charlie7 DNA MER1_type 2459 2543 -69 291 216 171 11 chr20 4192539 4192627 -67961255 - MIR SINE MIR -148 114 13 760 192 128 78 chr20 4193587 4194063 -67959819 + MLT1H LTR MaLR 5 545 -4 1862 137 4 11 chr20 4194210 4194481 -67959401 + AluSg SINE Alu 1 269 -41 272 320 109 34 chr20 4195044 4195191 -67958691 - L2 LINE L2 0 3272 3115 22 35 0 0 chr20 4195448 4195477 -67958405 + AT_rich Low_complexity Low_complexity 1 29 0 315 301 48 63 chr20 4196192 4196398 -67957484 + L2 LINE L2 1868 2070 -1244 21 36 0 0 chr20 4196915 4196943 -67956939 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr20 4197095 4197123 -67956759 + AT_rich Low_complexity Low_complexity 1 28 0 6655 179 34 40 chr20 4247657 4248314 -67905568 + L1MDa LINE L1 644 1303 -5237 2027 116 0 13 chr20 4248314 4248616 -67905266 + AluSx SINE Alu 1 298 -14 6655 179 34 40 chr20 4248616 4249352 -67904530 + L1MDa LINE L1 1303 2030 -4510 2245 100 3 6 chr20 4249352 4249663 -67904219 - AluSg SINE Alu 0 310 1 6655 179 34 40 chr20 4249663 4249757 -67904125 + L1MDa LINE L1 2030 2123 -4417 719 138 15 62 chr20 4249757 4249770 -67904112 - FLAM_C SINE Alu -175 137 125 2060 96 55 0 chr20 4249770 4250062 -67903820 - AluSc SINE Alu -1 308 1 719 138 15 62 chr20 4250062 4250178 -67903704 - FLAM_C SINE Alu -187 125 14 1443 139 60 168 chr20 4250178 4250221 -67903661 + L1MDa LINE L1 2117 2163 -4377 1979 90 0 4 chr20 4250221 4250488 -67903394 + AluSx SINE Alu 34 299 -13 2004 126 0 28 chr20 4250488 4250806 -67903076 + AluSg SINE Alu 1 309 -1 1443 139 60 168 chr20 4250806 4251385 -67902497 + L1MDa LINE L1 2161 2670 -3870 1032 158 0 0 chr20 4251386 4251550 -67902332 + FRAM SINE Alu 1 156 -20 4946 229 45 43 chr20 4251552 4253177 -67900705 + L1MDa LINE L1 2659 4287 -2253 2434 54 0 25 chr20 4253179 4253496 -67900386 + AluY SINE Alu 2 310 -1 2116 207 116 12 chr20 4253499 4253579 -67900303 + L1MB5 LINE L1 5022 5092 -1267 1298 283 59 14 chr20 4253579 4254003 -67899879 - LTR47B LTR ERVL 0 443 1 2116 207 116 12 chr20 4254003 4255111 -67898771 + L1MB5 LINE L1 5092 6356 -3 513 297 17 44 chr20 4255605 4255977 -67897905 - L2 LINE L2 -638 2676 2248 1553 132 4 24 chr20 4256656 4256907 -67896975 + AluJo SINE Alu 31 276 -36 24 0 0 0 chr20 4257019 4257043 -67896839 + AT_rich Low_complexity Low_complexity 1 24 0 360 0 0 0 chr20 4257873 4257913 -67895969 + (TG)n Simple_repeat Simple_repeat 2 41 0 286 257 14 0 chr20 4258651 4258721 -67895161 + LTR16A1 LTR ERVL 1 71 -386 966 235 39 8 chr20 4258733 4258988 -67894894 + LTR16A1 LTR ERVL 181 443 -14 295 315 30 46 chr20 4259277 4259357 -67894525 - MIR SINE MIR -61 201 121 798 170 113 0 chr20 4259357 4259516 -67894366 + MER69A DNA AcHobo 1 177 0 295 315 30 46 chr20 4259516 4259617 -67894265 - MIR SINE MIR -141 121 28 1974 187 113 25 chr20 4259981 4260357 -67893525 - MLT1H LTR MaLR 0 549 122 1928 176 26 57 chr20 4260357 4260782 -67893100 + MLT2D LTR ERVL 3 414 0 1974 187 113 25 chr20 4260782 4260875 -67893007 - MLT1H LTR MaLR -427 122 39 1391 159 40 22 chr20 4261193 4261470 -67892412 + AluJo SINE Alu 1 282 -30 283 266 106 9 chr20 4262152 4262265 -67891617 + MIR SINE MIR 29 152 -110 1408 234 151 19 chr20 4262272 4262704 -67891178 + LTR16C LTR ERVL 3 491 0 474 256 0 17 chr20 4263401 4263518 -67890364 + MER58 DNA MER1_type 5 119 -96 533 261 158 24 chr20 4263911 4264164 -67889718 + LTR33A LTR ERVL 235 521 -2 872 209 70 25 chr20 4264268 4264469 -67889413 + MER58A DNA MER1_type 15 224 0 462 272 154 12 chr20 4264474 4264636 -67889246 + MER5A DNA MER1_type 5 189 0 851 233 221 9 chr20 4264875 4265192 -67888690 + L1MC4a LINE L1 5437 5820 -1988 24 0 0 0 chr20 4265214 4265238 -67888644 + AT_rich Low_complexity Low_complexity 1 24 0 543 186 15 0 chr20 4265632 4265643 -67888239 + MER5A DNA MER1_type 6 18 -171 247 250 225 17 chr20 4265643 4265763 -67888119 - MER5A DNA MER1_type -2 187 43 1051 168 45 27 chr20 4267325 4267545 -67886337 + AluJo SINE Alu 70 293 -19 1771 194 78 99 chr20 4267552 4268089 -67885793 + MLT1H LTR MaLR 24 549 0 316 242 0 0 chr20 4268580 4268646 -67885236 + MER117 DNA MER1_type 93 158 -39 1485 179 96 67 chr20 4268698 4268837 -67885045 - Charlie4a DNA MER1_type -1500 461 328 1507 128 121 11 chr20 4268837 4269102 -67884780 + AluSg1 SINE Alu 1 294 -15 1485 179 96 67 chr20 4269102 4269409 -67884473 - Charlie4a DNA MER1_type -1633 328 2 382 340 55 47 chr20 4270095 4270439 -67883443 + LTR16C LTR ERVL 121 467 -24 286 254 0 0 chr20 4270484 4270543 -67883339 - MIR SINE MIR -78 130 72 23 33 0 0 chr20 4271395 4271425 -67882457 + AT_rich Low_complexity Low_complexity 1 30 0 2694 26 0 7 chr20 4271431 4271735 -67882147 - AluY SINE Alu -9 302 1 29 0 0 0 chr20 4271830 4271859 -67882023 + AT_rich Low_complexity Low_complexity 1 29 0 1152 180 29 130 chr20 4272072 4272318 -67881564 + L1ME3A LINE L1 5743 5926 -244 1672 135 40 72 chr20 4272318 4272622 -67881260 + AluJo SINE Alu 1 294 -18 1152 180 29 130 chr20 4272622 4272820 -67881062 + L1ME3A LINE L1 5926 6142 -28 252 299 14 75 chr20 4273702 4273849 -67880033 + L1MC4a LINE L1 5797 5934 -1874 2345 103 0 3 chr20 4273902 4274214 -67879668 + AluY SINE Alu 1 311 0 232 64 0 128 chr20 4274469 4274516 -67879366 + Alu SINE Alu 256 296 -6 2320 123 0 0 chr20 4274645 4274954 -67878928 - AluSx SINE Alu -3 309 1 1155 188 48 27 chr20 4274978 4275212 -67878670 + Charlie4a DNA MER1_type 42 270 -1691 1684 197 63 21 chr20 4275212 4275424 -67878458 - MSTD LTR MaLR 0 396 160 2059 142 0 26 chr20 4275424 4275623 -67878259 - AluSx SINE Alu -10 302 112 2521 67 3 0 chr20 4275623 4275920 -67877962 + AluY SINE Alu 1 298 -13 2059 142 0 26 chr20 4275920 4276030 -67877852 - AluSx SINE Alu -200 112 1 1684 197 63 21 chr20 4276030 4276197 -67877685 - MSTD LTR MaLR -236 160 1 1155 188 48 27 chr20 4276197 4276255 -67877627 + Charlie4a DNA MER1_type 270 340 -168 1079 135 18 127 chr20 4276268 4276434 -67877448 - AluJb SINE Alu -25 287 151 2358 109 7 0 chr20 4276434 4276738 -67877144 - AluSp SINE Alu -7 306 1 1079 135 18 127 chr20 4276738 4276800 -67877082 - AluJb SINE Alu -161 151 84 434 233 26 0 chr20 4276805 4276921 -67876961 - L1MA8 LINE L1 0 6291 6173 3787 143 40 5 chr20 4276921 4277570 -67876312 - L1MA6 LINE L1 -13 6287 5616 663 231 14 0 chr20 4277579 4277722 -67876160 + Charlie4a DNA MER1_type 354 498 -10 2506 142 33 26 chr20 4278935 4279303 -67874579 - MSTC LTR MaLR -3 425 61 426 20 0 0 chr20 4279303 4279354 -67874528 + (TTTC)n Simple_repeat Simple_repeat 2 52 0 2238 97 0 0 chr20 4279356 4279635 -67874247 - AluSc SINE Alu -30 279 1 2506 142 33 26 chr20 4279635 4279685 -67874197 - MSTC LTR MaLR -367 61 1 1383 242 170 52 chr20 4279836 4280636 -67873246 - L2 LINE L2 -24 3289 2370 2863 65 11 0 chr20 4280636 4280987 -67872895 + THE1A LTR MaLR 1 355 0 1383 242 170 52 chr20 4280987 4281020 -67872862 - L2 LINE L2 -943 2370 2342 2566 59 0 3 chr20 4281146 4281449 -67872433 + AluY SINE Alu 1 302 -9 851 206 16 0 chr20 4281462 4281646 -67872236 + L1ME2 LINE L1 5676 5862 -302 1084 184 0 11 chr20 4281724 4281909 -67871973 + AluJo SINE Alu 121 303 -9 501 294 100 12 chr20 4282758 4282918 -67870964 + LTR16C LTR ERVL 72 245 -246 * 547 184 9 9 chr20 4282917 4283031 -67870851 + LTR16C LTR ERVL 363 476 -15 272 270 0 0 chr20 4283291 4283354 -67870528 + MER117 DNA MER1_type 1 63 -134 378 347 41 14 chr20 4283580 4283727 -67870155 - MIR SINE MIR -84 178 28 1117 251 67 51 chr20 4284692 4285142 -67868740 - LTR16A1 LTR ERVL 0 457 1 2012 172 16 54 chr20 4285307 4285731 -67868151 + MLT2D LTR ERVL 7 414 0 227 298 193 0 chr20 4286680 4286794 -67867088 - MIR SINE MIR -79 183 48 23 0 0 0 chr20 4287052 4287075 -67866807 + AT_rich Low_complexity Low_complexity 1 23 0 943 226 74 36 chr20 4287138 4287475 -67866407 - L1ME3 LINE L1 -190 5972 5623 1777 181 70 79 chr20 4287537 4287855 -67866027 + MLT1C LTR MaLR 1 315 -152 2289 119 0 13 chr20 4287855 4288165 -67865717 + AluSx SINE Alu 1 306 -6 1777 181 70 79 chr20 4288165 4288317 -67865565 + MLT1C LTR MaLR 315 467 0 408 329 4 0 chr20 4288481 4288609 -67865273 - MIR SINE MIR -49 159 28 1479 132 106 0 chr20 4288997 4289232 -67864650 - AluJb SINE Alu -52 260 1 316 297 88 11 chr20 4289658 4289749 -67864133 - L2 LINE L2 -26 3246 3149 297 147 227 13 chr20 4289964 4290039 -67863843 - MIR SINE MIR -21 241 151 339 216 57 69 chr20 4290120 4290422 -67863460 + MLT1H LTR MaLR 151 409 0 569 248 90 0 chr20 4290430 4290563 -67863319 - MIR SINE MIR -116 146 2 336 228 8 16 chr20 4290600 4290727 -67863155 + (TA)n Simple_repeat Simple_repeat 1 126 0 740 268 111 34 chr20 4290735 4290775 -67863107 - L1ME3A LINE L1 -222 5948 5913 2174 109 3 0 chr20 4290775 4291089 -67862793 + AluSx SINE Alu 1 315 0 740 268 111 34 chr20 4291089 4291462 -67862420 - L1ME3A LINE L1 -257 5913 5502 427 279 22 0 chr20 4291462 4291598 -67862284 + LTR16A1 LTR ERVL 1 139 -318 209 213 0 21 chr20 4291754 4291801 -67862081 + GA-rich Low_complexity Low_complexity 3 48 0 228 167 0 0 chr20 4292601 4292649 -67861233 + (CA)n Simple_repeat Simple_repeat 2 49 0 604 213 8 8 chr20 4292807 4292929 -67860953 + MLT1D LTR MaLR 1 122 -383 1918 90 56 8 chr20 4292929 4293197 -67860685 + AluSx SINE Alu 21 301 -11 655 226 145 0 chr20 4293462 4293648 -67860234 - L1MD3 LINE L1 -378 7617 7405 24 0 0 0 chr20 4293657 4293681 -67860201 + AT_rich Low_complexity Low_complexity 1 24 0 722 200 0 36 chr20 4293681 4293821 -67860061 - FLAM_C SINE Alu -7 136 2 325 204 65 28 chr20 4293848 4293956 -67859926 - L1MD3 LINE L1 -792 7203 7092 460 221 159 0 chr20 4293962 4294075 -67859807 + MIR SINE MIR 121 251 -11 1035 135 29 92 chr20 4294422 4294629 -67859253 - AluJb SINE Alu -118 194 1 290 69 0 103 chr20 4294631 4294689 -67859193 + Tigger7 DNA MER2_type 2241 2292 -199 350 209 0 11 chr20 4294690 4294781 -67859101 + L1MD2 LINE L1 3861 3950 -2196 298 167 0 0 chr20 4294856 4294910 -67858972 - U6 snRNA snRNA -53 54 1 234 0 0 0 chr20 4294920 4294946 -67858936 + (T)n Simple_repeat Simple_repeat 1 26 0 288 0 0 0 chr20 4295034 4295066 -67858816 + (CA)n Simple_repeat Simple_repeat 2 33 0 1123 127 0 0 chr20 4295603 4295760 -67858122 - AluSq SINE Alu -13 300 144 2244 117 6 54 chr20 4295763 4296115 -67857767 + SVA Other Other 938 1272 -114 3171 134 49 28 chr20 4296115 4296644 -67857238 + LTR5 LTR ERVK 336 875 -94 6226 88 33 34 chr20 4296645 4298881 -67855001 - SVA Other Other -518 1386 33 5469 200 35 32 chr20 4298883 4299765 -67854117 + L1MD2 LINE L1 3941 4819 -1540 1811 172 3 16 chr20 4299765 4300068 -67853814 - AluJo SINE Alu -11 301 3 5469 200 35 32 chr20 4300068 4301263 -67852619 + L1MD2 LINE L1 4819 6040 -319 2138 105 0 3 chr20 4301263 4301578 -67852304 + AluSg SINE Alu 1 314 0 5469 200 35 32 chr20 4301578 4301899 -67851983 + L1MD2 LINE L1 6040 6359 0 1956 123 39 18 chr20 4302060 4302345 -67851537 + AluSq SINE Alu 1 291 -22 676 165 11 28 chr20 4302345 4302521 -67851361 + GA-rich Low_complexity Low_complexity 1 173 0 262 253 11 11 chr20 4302533 4302628 -67851254 + GA-rich Low_complexity Low_complexity 3 97 0 423 143 78 0 chr20 4303053 4303130 -67850752 + L1PB4 LINE L1 6066 6148 -8 2386 92 0 0 chr20 4303141 4303433 -67850449 + AluSx SINE Alu 2 293 -19 21 0 0 0 chr20 4303434 4303455 -67850427 + AT_rich Low_complexity Low_complexity 1 21 0 1934 128 54 10 chr20 4303514 4303811 -67850071 + AluJb SINE Alu 1 310 -2 1925 246 47 11 chr20 4304208 4304679 -67849203 + LTR16C LTR ERVL 2 489 -2 1011 238 22 11 chr20 4304700 4304969 -67848913 + L1ME1 LINE L1 5845 6116 -50 302 286 19 75 chr20 4305006 4305167 -67848715 - MIR3 SINE MIR -37 171 20 2131 221 128 27 chr20 4305343 4306017 -67847865 - HAL1 LINE L1 -701 1806 1039 219 69 0 0 chr20 4306017 4306046 -67847836 + (TG)n Simple_repeat Simple_repeat 2 30 0 2131 221 128 27 chr20 4306046 4306161 -67847721 - HAL1 LINE L1 -1468 1039 937 240 212 30 0 chr20 4307119 4307185 -67846697 - HAL1 LINE L1 -1593 914 847 1393 254 103 7 chr20 4307196 4307602 -67846280 + LTR16A1 LTR ERVL 4 448 -9 2061 255 98 45 chr20 4307606 4308411 -67845471 - HAL1 LINE L1 -1656 851 4 1706 141 0 12 chr20 4309215 4309488 -67844394 + AluSx SINE Alu 37 306 0 2464 82 0 3 chr20 4309489 4309794 -67844088 + AluSp SINE Alu 1 304 -9 820 314 24 14 chr20 4309795 4310085 -67843797 + LTR16C LTR ERVL 197 489 -2 2276 94 7 0 chr20 4310437 4310724 -67843158 + AluSg SINE Alu 10 298 -12 202 156 0 0 chr20 4311103 4311135 -67842747 - L2 LINE L2 -3 3269 3238 2459 88 3 0 chr20 4311313 4311619 -67842263 + AluSp SINE Alu 1 307 -6 196 224 245 41 chr20 4312488 4312586 -67841296 - L2 LINE L2 -31 3282 3165 1622 147 35 22 chr20 4312703 4313017 -67840865 - L1MC1 LINE L1 0 6333 6016 2322 100 3 0 chr20 4314267 4314566 -67839316 - AluSx SINE Alu -12 300 1 2564 49 0 16 chr20 4314645 4314952 -67838930 - AluY SINE Alu -9 302 1 37 52 0 0 chr20 4315130 4315188 -67838694 + GC_rich Low_complexity Low_complexity 1 58 0 25 31 0 0 chr20 4315324 4315356 -67838526 + GC_rich Low_complexity Low_complexity 1 32 0 342 0 0 0 chr20 4315967 4316005 -67837877 + (TG)n Simple_repeat Simple_repeat 1 38 0 2395 61 0 14 chr20 4316960 4317255 -67836627 + AluSq SINE Alu 1 291 -22 21 57 0 0 chr20 4317641 4317676 -67836206 + AT_rich Low_complexity Low_complexity 1 35 0 2148 122 0 28 chr20 4318293 4318614 -67835268 - AluSx SINE Alu 0 312 1 2561 206 137 48 chr20 4318757 4319690 -67834192 - HAL1 LINE L1 -121 2386 1371 329 154 125 140 chr20 4319701 4319837 -67834045 + MLT1G1 LTR MaLR 1 134 -461 2254 122 0 0 chr20 4320356 4320652 -67833230 - AluSg SINE Alu -14 296 1 396 0 0 0 chr20 4320652 4320696 -67833186 + (TTTG)n Simple_repeat Simple_repeat 4 47 0 1112 107 0 0 chr20 4320696 4320846 -67833036 - AluSg/x SINE Alu -32 280 131 23 0 0 0 chr20 4320880 4320903 -67832979 + AT_rich Low_complexity Low_complexity 1 23 0 685 313 132 38 chr20 4320987 4321540 -67832342 + L2 LINE L2 1214 1818 -1496 455 313 74 0 chr20 4321534 4321697 -67832185 + L2 LINE L2 3120 3294 -19 * 2344 83 3 3 chr20 4321900 4322188 -67831694 + AluSg1 SINE Alu 1 288 -21 665 36 100 0 chr20 4322188 4322437 -67831445 + (TA)n Simple_repeat Simple_repeat 1 273 0 733 222 78 39 chr20 4322447 4322677 -67831205 + MIR SINE MIR 24 262 0 1684 148 10 56 chr20 4322817 4323122 -67830760 - AluJb SINE Alu -21 291 1 2095 122 28 0 chr20 4324362 4324650 -67829232 - AluSx SINE Alu -16 296 1 239 301 240 0 chr20 4325498 4325644 -67828238 - MIR SINE MIR -54 208 28 789 211 95 81 chr20 4325903 4326331 -67827551 - MLT1D LTR MaLR -2 503 6 2391 100 0 6 chr20 4326800 4327111 -67826771 + AluSx SINE Alu 1 309 -3 2157 110 10 7 chr20 4327476 4327785 -67826097 + AluSg SINE Alu 1 310 0 21 36 0 0 chr20 4327943 4327971 -67825911 + AT_rich Low_complexity Low_complexity 1 28 0 2363 57 0 3 chr20 4328319 4328641 -67825241 - AluY SINE Alu 0 321 1 913 120 0 0 chr20 4328641 4328774 -67825108 - AluSg SINE Alu -177 133 1 1607 170 16 45 chr20 4328777 4329089 -67824793 - AluJo SINE Alu -9 303 1 2216 111 3 3 chr20 4329454 4329760 -67824122 - AluSx SINE Alu -6 306 1 2260 105 0 3 chr20 4330208 4330503 -67823379 - AluSq SINE Alu -19 294 1 1269 189 32 44 chr20 4330551 4330890 -67822992 - L1MB8 LINE L1 0 6178 5844 2276 99 3 3 chr20 4330959 4331272 -67822610 - AluSp SINE Alu 0 313 1 2134 136 3 0 chr20 4331636 4331946 -67821936 - AluSx SINE Alu -1 311 1 2296 85 0 32 chr20 4331959 4332140 -67821742 - AluSg SINE Alu -4 306 138 2436 99 0 0 chr20 4332140 4332452 -67821430 - AluSx SINE Alu 0 312 1 2296 85 0 32 chr20 4332452 4332586 -67821296 - AluSg SINE Alu -172 138 1 189 252 0 0 chr20 4332778 4332832 -67821050 + MIR SINE MIR 102 156 -52 1669 201 3 0 chr20 4333021 4333314 -67820568 + AluJb SINE Alu 3 296 -16 594 206 169 94 chr20 4333431 4333489 -67820393 - MLT1J LTR MaLR -19 492 440 2369 66 0 38 chr20 4333489 4333806 -67820076 - AluSc SINE Alu -4 305 1 594 206 169 94 chr20 4333806 4334184 -67819698 - MLT1J LTR MaLR -71 440 23 21 0 0 0 chr20 4334376 4334397 -67819485 + AT_rich Low_complexity Low_complexity 1 21 0 1189 140 144 0 chr20 4336659 4336916 -67816966 + L1MD3 LINE L1 7694 7987 -8 2212 110 3 0 chr20 4337158 4337450 -67816432 + AluSx SINE Alu 1 293 -19 435 274 47 1 chr20 4337450 4337590 -67816292 + MIR SINE MIR 46 191 -60 285 29 0 0 chr20 4338783 4338817 -67815065 + (TG)n Simple_repeat Simple_repeat 2 35 0 27 29 0 0 chr20 4338934 4338968 -67814914 + AT_rich Low_complexity Low_complexity 1 34 0 2182 117 0 3 chr20 4339198 4339497 -67814385 + AluY SINE Alu 6 303 -8 27 0 0 0 chr20 4339501 4339528 -67814354 + AT_rich Low_complexity Low_complexity 1 27 0 700 248 113 72 chr20 4339732 4339850 -67814032 - L1MC4a LINE L1 -1868 5940 5828 1419 191 3 66 chr20 4339850 4340169 -67813713 - AluJo SINE Alu -13 299 1 700 248 113 72 chr20 4340169 4340465 -67813417 - L1MC4a LINE L1 -1980 5828 5509 34 65 0 0 chr20 4340540 4340602 -67813280 + AT_rich Low_complexity Low_complexity 1 62 0 1148 275 42 21 chr20 4340784 4341170 -67812712 - MLT1I LTR MaLR 0 409 16 2616 55 0 0 chr20 4341228 4341535 -67812347 - AluY SINE Alu -4 307 1 313 250 81 32 chr20 4341652 4341776 -67812106 - L1MC4a LINE L1 -1543 4603 4474 1911 166 3 0 chr20 4341986 4342287 -67811595 + AluJo SINE Alu 1 302 -10 1866 190 0 3 chr20 4342394 4342704 -67811178 - AluJb SINE Alu -3 309 1 27 0 0 0 chr20 4342713 4342740 -67811142 + AT_rich Low_complexity Low_complexity 1 27 0 834 193 12 36 chr20 4343673 4343839 -67810043 + FRAM SINE Alu 1 162 -14 1835 113 0 16 chr20 4343839 4344095 -67809787 + AluSc SINE Alu 44 295 -14 1774 146 4 18 chr20 4344189 4344464 -67809418 + AluJb SINE Alu 2 272 -40 313 160 0 27 chr20 4344465 4344540 -67809342 + GA-rich Low_complexity Low_complexity 4 76 0 1606 74 34 176 chr20 4344692 4345045 -67808837 + AluSp SINE Alu 1 303 0 624 220 0 0 chr20 4345361 4345479 -67808403 + FLAM_A SINE Alu 5 122 -11 183 42 0 0 chr20 4345680 4345704 -67808178 + (TTG)n Simple_repeat Simple_repeat 2 25 0 1412 183 102 25 chr20 4346482 4346766 -67807116 - AluJo SINE Alu -4 308 3 2464 94 0 0 chr20 4346779 4347086 -67806796 - AluSx SINE Alu -5 307 1 280 287 65 33 chr20 4347291 4347536 -67806346 + L1M4 LINE L1 4296 4532 -1614 1294 182 81 86 chr20 4347536 4347842 -67806040 - MSTD LTR MaLR -3 393 87 1616 188 3 24 chr20 4347842 4348140 -67805742 - AluJb SINE Alu -20 292 1 2354 86 0 10 chr20 4348148 4348449 -67805433 - AluSg SINE Alu -12 298 1 1294 182 81 86 chr20 4348449 4348528 -67805354 - MSTD LTR MaLR -316 80 1 280 287 65 33 chr20 4348528 4348589 -67805293 + L1M4 LINE L1 4532 4612 -1534 288 0 0 0 chr20 4348609 4348641 -67805241 + (GA)n Simple_repeat Simple_repeat 1 32 0 1622 163 42 0 chr20 4348644 4348908 -67804974 - AluJb SINE Alu -37 275 1 1365 98 0 11 chr20 4349056 4349240 -67804642 + AluSc SINE Alu 118 299 -10 338 317 140 27 chr20 4349269 4349455 -67804427 + L1M4 LINE L1 4882 5088 -1058 575 243 92 23 chr20 4349815 4350033 -67803849 - Charlie8 DNA MER1_type -2184 233 1 1206 201 67 16 chr20 4350129 4350383 -67803499 + Tigger7 DNA MER2_type 1 267 -466 413 198 0 0 chr20 4350390 4350471 -67803411 + Tigger7 DNA MER2_type 2411 2491 0 350 290 81 91 chr20 4350703 4351037 -67802845 - L1M4 LINE L1 -2947 3199 2869 2124 107 3 17 chr20 4351037 4351356 -67802526 - AluSq SINE Alu 0 315 1 350 290 81 91 chr20 4351356 4351561 -67802321 - L1M4 LINE L1 -3277 2869 2664 24 0 0 0 chr20 4351606 4351630 -67802252 + AT_rich Low_complexity Low_complexity 1 24 0 2092 95 50 0 chr20 4351638 4351921 -67801961 - AluSx SINE Alu -15 297 1 446 265 101 39 chr20 4351965 4352222 -67801660 - L1M4 LINE L1 -3706 2440 2168 803 115 79 6 chr20 4352223 4352388 -67801494 - L1MA4 LINE L1 -22 6278 6102 1822 99 122 0 chr20 4352409 4352672 -67801210 + AluSg SINE Alu 1 295 -5 489 200 54 8 chr20 4352679 4352809 -67801073 - L1MA4 LINE L1 -155 6145 6010 2461 57 3 0 chr20 4352863 4353161 -67800721 - AluY SINE Alu -12 299 1 315 237 0 92 chr20 4353597 4353728 -67800154 - HAL1b LINE L1 -819 529 450 1005 177 25 0 chr20 4353731 4353929 -67799953 - L1MD1 LINE L1 0 6636 6434 3285 160 21 5 chr20 4353941 4354548 -67799334 - L1MD1 LINE L1 -318 6318 5702 642 138 0 18 chr20 4354548 4354657 -67799225 - MLT1C LTR MaLR -7 460 354 1371 158 0 0 chr20 4354658 4354860 -67799022 + AluSx SINE Alu 1 202 -110 720 172 71 65 chr20 4354874 4355187 -67798695 - MLT1C LTR MaLR -113 354 2 8277 208 98 76 chr20 4355190 4357515 -67796367 - L1MD1 LINE L1 -841 5699 3428 2260 117 0 0 chr20 4357515 4357824 -67796058 - AluSq SINE Alu -4 309 1 2179 100 0 20 chr20 4357825 4358126 -67795756 - AluSx SINE Alu -17 295 1 8277 208 98 76 chr20 4358126 4359794 -67794088 - L1MD1 LINE L1 -3112 3428 1800 1426 112 0 0 chr20 4359794 4359981 -67793901 - AluSq SINE Alu -126 187 1 8277 208 98 76 chr20 4359981 4360763 -67793119 - L1MD1 LINE L1 -4740 1800 1037 1717 77 0 0 chr20 4360763 4360971 -67792911 + AluSc SINE Alu 88 295 -14 8277 208 98 76 chr20 4360971 4361470 -67792412 - L1MD1 LINE L1 -5503 1037 14 737 248 67 50 chr20 4361536 4361774 -67792108 - MIR SINE MIR 0 262 21 1569 197 7 30 chr20 4362118 4362418 -67791464 - AluJo SINE Alu -19 293 1 2131 96 17 3 chr20 4362430 4362721 -67791161 - AluSg SINE Alu -15 295 1 2178 96 51 0 chr20 4362738 4363030 -67790852 - AluSc SINE Alu -1 308 2 342 0 0 0 chr20 4364237 4364275 -67789607 + (CA)n Simple_repeat Simple_repeat 2 39 0 273 283 44 96 chr20 4364304 4364529 -67789353 - MIR3 SINE MIR -45 217 2 2216 125 3 3 chr20 4364582 4364893 -67788989 - AluSx SINE Alu -1 311 1 197 283 102 58 chr20 4365791 4365927 -67787955 + MIR SINE MIR 2 156 -52 1862 154 27 14 chr20 4365927 4366220 -67787662 + AluJb SINE Alu 1 297 -15 197 283 102 58 chr20 4366220 4366275 -67787607 + MIR SINE MIR 156 207 -1 295 211 53 66 chr20 4366505 4366581 -67787301 + L2 LINE L2 3239 3313 0 2270 115 0 0 chr20 4367252 4367556 -67786326 + AluSx SINE Alu 1 304 -8 2047 108 42 0 chr20 4367746 4368032 -67785850 + AluSq SINE Alu 1 298 -15 1682 180 7 11 chr20 4368367 4368674 -67785208 - AluJb SINE Alu 0 306 1 21 57 0 0 chr20 4369016 4369051 -67784831 + AT_rich Low_complexity Low_complexity 1 35 0 1769 186 17 0 chr20 4369324 4369625 -67784257 - AluJo SINE Alu -6 306 1 1913 104 86 7 chr20 4369652 4369931 -67783951 + AluSx SINE Alu 1 301 -11 2218 90 0 0 chr20 4370054 4370357 -67783525 - AluSc SINE Alu 0 303 1 402 244 33 11 chr20 4370828 4370918 -67782964 + L2 LINE L2 3222 3313 0 524 208 154 41 chr20 4370924 4371145 -67782737 + HAL1 LINE L1 2261 2506 -1 620 136 10 0 chr20 4371156 4371259 -67782623 + L1MA4 LINE L1 6184 6287 -13 499 334 156 53 chr20 4371320 4371803 -67782079 - L2 LINE L2 -715 2599 2167 2220 114 3 0 chr20 4371803 4372092 -67781790 + AluSx SINE Alu 1 290 -22 499 334 156 53 chr20 4372092 4372907 -67780975 - L2 LINE L2 -1147 2167 1167 32 0 0 0 chr20 4373242 4373274 -67780608 + AT_rich Low_complexity Low_complexity 1 32 0 1588 153 55 49 chr20 4373259 4373434 -67780448 - AluJb SINE Alu -2 310 131 2146 97 7 17 chr20 4373434 4373734 -67780148 - AluSx SINE Alu -15 297 1 1588 153 55 49 chr20 4373734 4373866 -67780016 - AluJb SINE Alu -181 131 1 819 210 56 80 chr20 4373994 4374456 -67779426 + L1ME3 LINE L1 2991 3441 -2705 4019 209 24 15 chr20 4374479 4375405 -67778477 + L1MB5 LINE L1 4012 4945 -1201 * 4307 170 56 12 chr20 4375402 4375828 -67778054 + L1MB5 LINE L1 5160 5566 -608 2083 109 17 3 chr20 4375828 4376122 -67777760 - AluSg SINE Alu -12 298 1 4307 170 56 12 chr20 4376122 4376650 -67777232 + L1MB5 LINE L1 5566 6155 -19 2236 98 3 0 chr20 4376689 4376985 -67776897 + AluSx SINE Alu 1 297 -15 1745 109 4 0 chr20 4377037 4377284 -67776598 + AluSg SINE Alu 55 302 -8 2179 83 7 7 chr20 4377293 4377594 -67776288 + AluY SINE Alu 1 301 -10 1857 248 184 55 chr20 4377648 4378734 -67775148 + L1ME3 LINE L1 3552 4777 -1369 2155 169 200 142 chr20 4378734 4379488 -67774394 + L1MC4a LINE L1 6678 7514 -294 2287 80 0 7 chr20 4379488 4379789 -67774093 + AluY SINE Alu 1 299 -12 2155 169 200 142 chr20 4379789 4380102 -67773780 + L1MC4a LINE L1 7514 7807 -1 1686 229 22 22 chr20 4380136 4380542 -67773340 - MLT1C LTR MaLR -3 464 59 1059 253 42 31 chr20 4380589 4380973 -67772909 + L1ME3 LINE L1 4780 5167 -979 1925 130 10 3 chr20 4381048 4381341 -67772541 - AluJb SINE Alu -17 295 1 2094 115 0 0 chr20 4381352 4381647 -67772235 - AluSx SINE Alu -17 295 1 2039 225 50 11 chr20 4381659 4382180 -67771702 + L1ME3 LINE L1 5616 6156 -6 2458 59 3 0 chr20 4382673 4382980 -67770902 - AluSp SINE Alu -5 308 1 2144 90 3 13 chr20 4383534 4383834 -67770048 - AluSc SINE Alu -12 297 1 1211 100 45 68 chr20 4384032 4384252 -67769630 - AluJb SINE Alu -11 301 87 1701 134 48 4 chr20 4384264 4384560 -67769322 - AluJb SINE Alu 0 308 1 2276 97 0 0 chr20 4385012 4385312 -67768570 - AluSq SINE Alu -13 300 1 21 57 0 0 chr20 4386358 4386393 -67767489 + AT_rich Low_complexity Low_complexity 1 35 0 2258 102 0 0 chr20 4386514 4386817 -67767065 - AluSx SINE Alu -9 303 1 1444 240 12 30 chr20 4387155 4387559 -67766323 - L1M4 LINE L1 -1253 5287 4891 * 2972 185 65 131 chr20 4387548 4387630 -67766252 - L1MDa LINE L1 -3660 2880 2794 2046 118 3 0 chr20 4387630 4387926 -67765956 + AluSq SINE Alu 2 298 -15 2972 185 65 131 chr20 4387926 4387972 -67765910 - L1MDa LINE L1 -3746 2794 2747 2375 52 0 3 chr20 4387972 4388260 -67765622 + AluY SINE Alu 1 287 -24 2972 185 65 131 chr20 4388260 4388276 -67765606 - L1MDa LINE L1 -3793 2747 2732 1827 169 0 0 chr20 4388276 4388571 -67765311 + AluJo SINE Alu 1 295 -17 2972 185 65 131 chr20 4388571 4388641 -67765241 - L1MDa LINE L1 -3808 2732 2659 2231 109 3 0 chr20 4388641 4388952 -67764930 - AluSx SINE Alu 0 312 1 2972 185 65 131 chr20 4388952 4389485 -67764397 - L1MDa LINE L1 -3881 2659 2092 1127 189 26 21 chr20 4389485 4389718 -67764164 + AluJb SINE Alu 64 297 -15 2972 185 65 131 chr20 4389718 4390486 -67763396 - L1MDa LINE L1 -4448 2092 1308 1823 161 3 0 chr20 4390487 4390779 -67763103 + AluSp SINE Alu 1 293 -20 3594 201 42 38 chr20 4390785 4391453 -67762429 + L1M4 LINE L1 4379 5043 -1103 760 181 8 0 chr20 4391453 4391580 -67762302 + FLAM_A SINE Alu 1 128 -5 3594 201 42 38 chr20 4391580 4391692 -67762190 + L1M4 LINE L1 5043 5153 -993 1630 132 16 55 chr20 4391692 4392003 -67761879 + AluJo SINE Alu 1 299 -13 3594 201 42 38 chr20 4392003 4392148 -67761734 + L1M4 LINE L1 5153 5309 -837 466 133 133 9 chr20 4392153 4392266 -67761616 - L1M4 LINE L1 -912 5234 5108 424 214 19 10 chr20 4392319 4392422 -67761460 - L1M4 LINE L1 -1199 4947 4844 * 4260 172 66 27 chr20 4392419 4393311 -67760571 + L1MB7 LINE L1 5240 6165 -19 2171 97 0 7 chr20 4393608 4393906 -67759976 + AluSc SINE Alu 1 296 -13 215 254 104 0 chr20 4394088 4394155 -67759727 - MIR SINE MIR -82 180 107 229 277 92 0 chr20 4394371 4394490 -67759392 - MIR SINE MIR -62 146 17 227 260 26 52 chr20 4394703 4394780 -67759102 - L2 LINE L2 -675 2639 2565 334 286 53 30 chr20 4394853 4394986 -67758896 + MIR3 SINE MIR 41 176 -32 209 224 20 0 chr20 4397601 4397650 -67756232 + CT-rich Low_complexity Low_complexity 2 51 0 216 0 0 0 chr20 4397657 4397681 -67756201 + (A)n Simple_repeat Simple_repeat 1 24 0 192 254 119 79 chr20 4400148 4400274 -67753608 + MIR SINE MIR 56 186 -76 1070 149 47 42 chr20 4401337 4401552 -67752330 - AluJo SINE Alu -16 296 81 2064 97 13 26 chr20 4401590 4401900 -67751982 + AluSx SINE Alu 1 306 -6 2332 66 30 0 chr20 4401967 4402269 -67751613 - AluY SINE Alu 0 311 1 2056 89 16 20 chr20 4403783 4404087 -67749795 - AluSx SINE Alu -9 303 1 203 305 49 12 chr20 4405120 4405202 -67748680 - L2 LINE L2 -1349 1965 1881 1963 109 11 0 chr20 4405211 4405495 -67748387 + AluSx SINE Alu 1 287 -25 352 254 71 40 chr20 4405633 4405759 -67748123 + MIR SINE MIR 23 152 -110 1829 137 13 7 chr20 4408736 4409035 -67744847 + AluSx SINE Alu 1 301 -11 23 0 0 0 chr20 4409208 4409231 -67744651 + AT_rich Low_complexity Low_complexity 1 23 0 1734 63 5 0 chr20 4409470 4409692 -67744190 + L1PA5 LINE L1 5931 6153 -1 2220 91 7 0 chr20 4409883 4410180 -67743702 - AluSp SINE Alu -14 299 1 1994 104 19 35 chr20 4410199 4410515 -67743367 - AluSx SINE Alu -1 311 1 1831 149 3 23 chr20 4411536 4411844 -67742038 + AluSx SINE Alu 4 305 -7 255 328 54 32 chr20 4412568 4412754 -67741128 + L1ME LINE L1 5524 5713 -408 804 110 28 0 chr20 4413088 4413197 -67740685 - AluY SINE Alu -198 113 2 234 0 0 0 chr20 4413649 4413675 -67740207 + (TG)n Simple_repeat Simple_repeat 1 26 0 2028 108 0 0 chr20 4413675 4413953 -67739929 - AluSx SINE Alu -33 279 2 1281 211 192 53 chr20 4414466 4414935 -67738947 - MLT1H LTR MaLR 0 549 16 872 251 40 12 chr20 4419040 4419287 -67734595 + MIR SINE MIR 9 262 0 1271 113 35 15 chr20 4419312 4419515 -67734367 + AluJo SINE Alu 90 296 -16 2046 118 3 0 chr20 4420258 4420554 -67733328 + AluSx SINE Alu 1 297 -15 1002 149 0 39 chr20 4420620 4420801 -67733081 + AluSg/x SINE Alu 119 292 -18 1216 176 112 32 chr20 4420912 4421074 -67732808 - AluJo SINE Alu -8 304 156 2391 62 0 3 chr20 4421074 4421378 -67732504 - AluY SINE Alu -8 303 1 1216 176 112 32 chr20 4421378 4421493 -67732389 - AluJo SINE Alu -156 156 5 2124 105 10 0 chr20 4421505 4421809 -67732073 - AluSx SINE Alu -5 307 1 903 150 0 0 chr20 4422423 4422582 -67731300 + FLAM_C SINE Alu 1 159 0 495 214 23 30 chr20 4422655 4422786 -67731096 - L1MC5 LINE L1 -51 7910 7781 2169 102 3 0 chr20 4422792 4423086 -67730796 - AluSq SINE Alu -18 295 1 508 217 19 0 chr20 4423809 4423915 -67729967 - MIR SINE MIR -25 237 130 1640 179 7 0 chr20 4424063 4424342 -67729540 + AluJo SINE Alu 1 281 -31 268 235 141 0 chr20 4424721 4424806 -67729076 - L2 LINE L2 -6 3307 3211 1628 249 70 50 chr20 4424993 4425067 -67728815 + L1ME3A LINE L1 5483 5554 -616 1750 181 27 51 chr20 4425067 4425156 -67728726 + MLT1A1 LTR MaLR 1 91 -274 1965 131 3 7 chr20 4425156 4425453 -67728429 + AluSx SINE Alu 1 296 -16 1750 181 27 51 chr20 4425453 4425734 -67728148 + MLT1A1 LTR MaLR 91 362 -3 1628 249 70 50 chr20 4425734 4426258 -67727624 + L1ME3A LINE L1 5554 6093 -77 1289 195 80 33 chr20 4426279 4426725 -67727157 - MER89 LTR ERV1 0 559 3 183 319 0 0 chr20 4426900 4426947 -67726935 + L2 LINE L2 3001 3047 -225 1549 189 3 7 chr20 4427037 4427338 -67726544 + AluJo SINE Alu 1 300 -12 23 0 0 0 chr20 4427372 4427395 -67726487 + AT_rich Low_complexity Low_complexity 1 23 0 1675 172 7 7 chr20 4428267 4428569 -67725313 - AluJo SINE Alu -6 306 5 1213 253 43 16 chr20 4428652 4429003 -67724879 + L1MC4a LINE L1 5560 5923 -1885 1641 100 21 8 chr20 4429003 4429243 -67724639 + AluSc SINE Alu 1 243 -66 1213 253 43 16 chr20 4429243 4429262 -67724620 + L1MC4a LINE L1 5923 5940 -1868 544 122 55 216 chr20 4429284 4429318 -67724564 + L1MC5 LINE L1 6923 6961 -1000 2101 96 3 26 chr20 4429318 4429453 -67724429 + AluSg SINE Alu 1 138 -172 1968 72 14 51 chr20 4429453 4429770 -67724112 + AluY SINE Alu 3 308 0 2101 96 3 26 chr20 4429770 4429946 -67723936 + AluSg SINE Alu 138 306 -4 1993 122 7 0 chr20 4429948 4430243 -67723639 + AluSx SINE Alu 3 299 -13 544 122 55 216 chr20 4430243 4430460 -67723422 + L1MC5 LINE L1 6962 7136 -825 1846 124 3 14 chr20 4430460 4430742 -67723140 + AluSx SINE Alu 1 279 -33 360 0 0 0 chr20 4430742 4430782 -67723100 + (CA)n Simple_repeat Simple_repeat 1 40 0 1612 151 0 25 chr20 4430960 4431239 -67722643 + AluJo SINE Alu 35 306 -6 2172 104 7 0 chr20 4431297 4431594 -67722288 + AluSp SINE Alu 1 299 -14 462 161 129 0 chr20 4431664 4431757 -67722125 - FLAM_A SINE Alu -18 124 20 2260 75 0 30 chr20 4431896 4432201 -67721681 + AluY SINE Alu 1 296 -15 1968 102 46 0 chr20 4432424 4432707 -67721175 - AluSx SINE Alu -16 296 1 2113 89 0 17 chr20 4432896 4433188 -67720694 - AluSg1 SINE Alu -20 289 3 549 110 12 12 chr20 4433192 4433274 -67720608 - AluSg/x SINE Alu -19 290 209 1776 159 7 0 chr20 4433493 4433789 -67720093 + AluJb SINE Alu 1 298 -14 2415 50 0 10 chr20 4433790 4434090 -67719792 + AluY SINE Alu 1 297 -14 1989 109 30 10 chr20 4434098 4434400 -67719482 + AluSx SINE Alu 1 308 -4 2065 89 0 0 chr20 4434539 4434808 -67719074 + AluSp SINE Alu 34 302 -11 263 351 123 9 chr20 4434907 4434931 -67718951 - L2 LINE L2 -449 2865 2845 2485 61 0 6 chr20 4434931 4435243 -67718639 + AluY SINE Alu 2 311 0 263 351 123 9 chr20 4435243 4435446 -67718436 - L2 LINE L2 -469 2845 2612 2536 46 0 0 chr20 4435497 4435802 -67718080 - AluY SINE Alu -4 307 3 1812 138 14 0 chr20 4435852 4436143 -67717739 - AluJb SINE Alu -17 295 1 1858 120 22 0 chr20 4436172 4436480 -67717402 + AluSx SINE Alu 1 314 0 2047 117 3 0 chr20 4437125 4437424 -67716458 - AluSx SINE Alu -12 300 1 2140 202 90 12 chr20 4437567 4438047 -67715835 + MLT1F LTR MaLR 14 530 -12 2371 70 3 0 chr20 4438292 4438594 -67715288 - AluY SINE Alu -8 303 1 34 24 0 0 chr20 4438596 4438637 -67715245 + AT_rich Low_complexity Low_complexity 1 41 0 414 198 119 8 chr20 4438705 4438831 -67715051 - L1ME3A LINE L1 -9 6161 6022 2134 118 0 3 chr20 4438846 4439151 -67714731 - AluSx SINE Alu -8 304 1 25 0 0 0 chr20 4439151 4439176 -67714706 + AT_rich Low_complexity Low_complexity 1 25 0 2065 96 6 25 chr20 4439206 4439520 -67714362 - AluSg SINE Alu -2 308 1 180 315 0 19 chr20 4439567 4439621 -67714261 + MIR SINE MIR 58 110 -98 904 111 131 0 chr20 4440137 4440290 -67713592 - AluSp SINE Alu -8 305 133 1660 149 6 43 chr20 4442942 4443265 -67710617 - AluJo SINE Alu -1 311 1 420 272 194 11 chr20 4443278 4443458 -67710424 - MIR SINE MIR -48 214 2 2057 101 10 26 chr20 4443959 4444266 -67709616 + AluSx SINE Alu 1 302 -10 1458 75 10 10 chr20 4444397 4444597 -67709285 + AluSg/x SINE Alu 98 297 -12 258 311 40 0 chr20 4444756 4444830 -67709052 + MER5A DNA MER1_type 76 152 -37 685 297 48 9 chr20 4444939 4445168 -67708714 - MIR SINE MIR -5 257 20 226 121 379 0 chr20 4445301 4445367 -67708515 - L1ME1 LINE L1 -4 6162 6072 2046 132 7 0 chr20 4445826 4446136 -67707746 - AluSq SINE Alu -1 312 1 2184 97 10 0 chr20 4446145 4446445 -67707437 - AluSp SINE Alu -10 303 1 1121 148 0 0 chr20 4446478 4446654 -67707228 - AluSg/x SINE Alu -6 306 131 1570 160 19 0 chr20 4446914 4447210 -67706672 + AluSx SINE Alu 13 313 0 835 136 0 102 chr20 4447211 4447388 -67706494 + AluJo SINE Alu 124 282 -30 204 40 0 0 chr20 4447390 4447415 -67706467 + (T)n Simple_repeat Simple_repeat 1 25 0 2156 73 0 54 chr20 4447968 4448283 -67705599 - AluY SINE Alu -13 298 1 3494 191 109 19 chr20 4448312 4449094 -67704788 + MER21B LTR ERV1 1 852 -11 1737 150 29 26 chr20 4449324 4449631 -67704251 + AluJb SINE Alu 1 308 -4 1944 118 14 7 chr20 4449632 4449921 -67703961 + AluSx SINE Alu 3 293 -19 343 273 188 13 chr20 4449941 4450095 -67703787 - L1M4 LINE L1 -2207 3939 3759 2047 122 7 0 chr20 4450098 4450401 -67703481 - AluSx SINE Alu -3 309 5 319 251 166 33 chr20 4450423 4450730 -67703152 - L1M4 LINE L1 -3116 3030 2683 2043 113 7 3 chr20 4450778 4451079 -67702803 - AluSg SINE Alu -8 302 1 1909 139 7 3 chr20 4451082 4451376 -67702506 - AluSx SINE Alu -17 295 1 2291 70 10 0 chr20 4451609 4451909 -67701973 - AluY SINE Alu -8 303 1 28 0 0 0 chr20 4452655 4452683 -67701199 + AT_rich Low_complexity Low_complexity 1 28 0 2013 96 0 4 chr20 4452684 4452955 -67700927 - AluSx SINE Alu -22 290 21 1446 163 48 4 chr20 4452959 4453253 -67700629 - AluJo SINE Alu 0 306 1 533 235 161 23 chr20 4453662 4453922 -67699960 - HAL1 LINE L1 -821 1686 1391 959 181 42 28 chr20 4454069 4454284 -67699598 - AluJo SINE Alu -9 303 86 406 156 16 0 chr20 4454285 4454349 -67699533 - AluSx SINE Alu -52 250 186 397 107 0 0 chr20 4454343 4454399 -67699483 - AluSx SINE Alu -162 141 86 * 1085 198 0 31 chr20 4454399 4454626 -67699256 - AluJo SINE Alu -92 220 1 305 242 0 21 chr20 4454782 4454807 -67699075 - L1MA10 LINE L1 -1 6333 6309 680 265 78 39 chr20 4454807 4454878 -67699004 - L1ME1 LINE L1 -15 6151 6084 414 0 0 0 chr20 4454878 4454924 -67698958 + (CA)n Simple_repeat Simple_repeat 2 47 0 680 265 78 39 chr20 4454924 4455044 -67698838 - L1ME1 LINE L1 -82 6084 5970 2087 123 0 10 chr20 4455044 4455353 -67698529 - AluSx SINE Alu -6 306 1 1473 121 6 118 chr20 4455359 4455537 -67698345 - AluSc SINE Alu 0 309 187 2094 108 0 3 chr20 4455537 4455832 -67698050 - AluSg SINE Alu -16 294 1 1473 121 6 118 chr20 4455832 4456001 -67697881 - AluSc SINE Alu -122 187 1 680 265 78 39 chr20 4456001 4456133 -67697749 - L1ME1 LINE L1 -200 5966 5807 263 203 105 105 chr20 4456153 4456204 -67697678 - L1MD2 LINE L1 -137 6222 6172 1439 186 47 10 chr20 4456204 4456505 -67697377 + AluJo SINE Alu 1 312 0 263 203 105 105 chr20 4456505 4456586 -67697296 - L1MD2 LINE L1 -186 6173 6090 2355 47 14 3 chr20 4457256 4457552 -67696330 - AluY SINE Alu -12 299 1 2162 91 3 3 chr20 4457623 4457921 -67695961 - AluSx SINE Alu -14 298 1 1414 149 45 128 chr20 4457975 4458048 -67695834 - MER47A DNA MER2_type -1957 366 289 1752 171 10 0 chr20 4458048 4458346 -67695536 + AluJb SINE Alu 1 301 -11 1414 149 45 128 chr20 4458346 4458669 -67695213 - MER47A DNA MER2_type -2034 289 3 2031 118 7 0 chr20 4458711 4459000 -67694882 - AluSc SINE Alu -18 291 1 1920 141 20 3 chr20 4459005 4459304 -67694578 - AluSx SINE Alu -8 304 1 2048 96 44 0 chr20 4460992 4461285 -67692597 - AluSp SINE Alu -7 306 1 905 105 0 0 chr20 4461312 4461436 -67692446 - AluSq/x SINE Alu -189 124 1 300 265 68 77 chr20 4461441 4461498 -67692384 - L1MC4a LINE L1 -1927 5881 5825 2121 100 0 13 chr20 4461498 4461797 -67692085 - AluSg SINE Alu -15 295 1 300 265 68 77 chr20 4461797 4461856 -67692026 - L1MC4a LINE L1 -1983 5825 5766 222 62 0 0 chr20 4462201 4462233 -67691649 + (T)n Simple_repeat Simple_repeat 1 32 0 2227 95 0 3 chr20 4463208 4463504 -67690378 + AluSg SINE Alu 1 295 -15 2146 96 7 0 chr20 4463515 4463808 -67690074 + AluSp SINE Alu 1 295 -18 1918 112 67 0 chr20 4464575 4464860 -67689022 + AluSg SINE Alu 1 304 -6 3828 187 88 60 chr20 4464887 4465254 -67688628 - L1MB7 LINE L1 0 6184 5829 1951 98 35 3 chr20 4465254 4465540 -67688342 - AluSp SINE Alu -18 295 1 3828 187 88 60 chr20 4465540 4465696 -67688186 - L1MB7 LINE L1 -355 5829 5679 2238 84 0 3 chr20 4465696 4465994 -67687888 - AluY SINE Alu -14 297 1 3828 187 88 60 chr20 4465994 4466225 -67687657 - L1MB7 LINE L1 -505 5679 5456 1305 186 61 7 chr20 4466225 4466504 -67687378 - AluJo SINE Alu -18 294 1 1730 147 3 36 chr20 4466509 4466815 -67687067 - AluSx SINE Alu -16 296 1 3828 187 88 60 chr20 4466815 4467201 -67686681 - L1MB7 LINE L1 -731 5453 5079 2391 64 3 0 chr20 4467201 4467498 -67686384 - AluSc SINE Alu -8 301 4 3828 187 88 60 chr20 4467498 4468175 -67685707 - L1MB7 LINE L1 -1105 5079 4308 22 35 0 0 chr20 4469555 4469584 -67684298 + AT_rich Low_complexity Low_complexity 1 29 0 4769 187 139 107 chr20 4469710 4469962 -67683920 + L1MDa LINE L1 285 527 -6013 1576 81 0 5 chr20 4469962 4470171 -67683711 - AluSc SINE Alu -14 295 88 4769 187 139 107 chr20 4470171 4470953 -67682929 + L1MDa LINE L1 527 1282 -5258 1352 112 0 0 chr20 4470953 4471140 -67682742 + AluSq SINE Alu 1 187 -126 4769 187 139 107 chr20 4471140 4472807 -67681075 + L1MDa LINE L1 1282 3349 -3191 2062 118 3 0 chr20 4472807 4473096 -67680786 + AluSx SINE Alu 1 290 -22 244 325 148 57 chr20 4473141 4473910 -67679972 - L2 LINE L2 -1309 2005 1167 1636 157 57 23 chr20 4474260 4474427 -67679455 - AluJb SINE Alu -2 310 127 2214 94 7 16 chr20 4474427 4474735 -67679147 - AluSx SINE Alu -7 305 1 1636 157 57 23 chr20 4474735 4474867 -67679015 - AluJb SINE Alu -185 127 1 769 209 62 74 chr20 4474995 4475430 -67678452 + L1MDa LINE L1 3385 3814 -2726 394 257 27 14 chr20 4475494 4475639 -67678243 + L1MDa LINE L1 4420 4560 -1980 2795 205 38 55 chr20 4475822 4476475 -67677407 - L1MDa LINE L1 -5883 657 16 391 331 77 14 chr20 4476933 4477220 -67676662 - L2 LINE L2 -666 2648 2344 531 233 8 8 chr20 4477647 4477767 -67676115 + L2 LINE L2 3193 3312 -1 2580 27 0 3 chr20 4478538 4478839 -67675043 - AluY SINE Alu -11 300 1 1341 199 112 38 chr20 4479452 4479819 -67674063 - MSTD LTR MaLR -2 394 1 2241 113 30 27 chr20 4479854 4480190 -67673692 - MER1B DNA MER1_type 0 337 1 2221 177 18 111 chr20 4480254 4480369 -67673513 + MER44D DNA MER2_type 1 125 -2362 2204 116 3 0 chr20 4480369 4480679 -67673203 + AluSx SINE Alu 1 311 -1 2221 177 18 111 chr20 4480679 4481166 -67672716 + MER44D DNA MER2_type 125 602 -3 201 74 0 0 chr20 4481954 4481981 -67671901 + (TA)n Simple_repeat Simple_repeat 1 27 0 230 192 19 0 chr20 4482000 4482052 -67671830 + LTR66 LTR ERVL 389 441 -169 337 190 0 130 chr20 4482075 4482175 -67671707 - L1MC4 LINE L1 -1342 6700 6614 * 430 267 0 0 chr20 4482171 4482261 -67671621 + L1MC4 LINE L1 6614 6703 -1339 425 221 28 0 chr20 4482265 4482371 -67671511 + L1MC4 LINE L1 1995 6983 -1339 386 311 0 0 chr20 4482291 4482381 -67671501 - L1MC4 LINE L1 -1339 6703 6614 * 308 196 0 0 chr20 4482372 4482423 -67671459 + L1MC4 LINE L1 6933 6983 -1339 * 418 203 32 32 chr20 4482426 4482549 -67671333 - MLT1H LTR MaLR 0 549 427 679 286 6 17 chr20 4482563 4482738 -67671144 - MLT1H LTR MaLR -271 278 106 1039 156 0 0 chr20 4482746 4482913 -67670969 - FRAM SINE Alu -9 167 1 474 172 149 0 chr20 4482918 4483005 -67670877 - MLT1H LTR MaLR -449 100 1 242 303 191 25 chr20 4483009 4483286 -67670596 + L2 LINE L2 2430 2752 -562 325 288 45 18 chr20 4483532 4483643 -67670239 - LTR67 LTR ERVL -288 269 156 385 248 205 24 chr20 4484209 4484463 -67669419 + LTR16A1 LTR ERVL 1 300 -157 1211 129 67 0 chr20 4484851 4485045 -67668837 - AluJo SINE Alu -10 302 96 194 335 181 11 chr20 4485360 4485542 -67668340 + L2 LINE L2 2599 2811 -503 397 136 0 0 chr20 4485542 4485601 -67668281 + AluS SINE Alu 1 59 -249 1428 92 0 5 chr20 4485601 4485796 -67668086 - AluSx SINE Alu -118 194 1 1424 238 24 84 chr20 4485796 4486245 -67667637 + MLT2B1 LTR ERVL 15 511 -43 189 107 0 0 chr20 4486245 4486273 -67667609 + (TATATG)n Simple_repeat Simple_repeat 2 29 0 1424 238 24 84 chr20 4486273 4486308 -67667574 + MLT2B1 LTR ERVL 511 547 -7 1244 182 81 36 chr20 4486340 4486454 -67667428 - MER33 DNA MER1_type -2262 323 216 2153 103 3 0 chr20 4486454 4486746 -67667136 + AluSp SINE Alu 1 293 -20 1244 182 81 36 chr20 4486746 4486939 -67666943 - MER33 DNA MER1_type -2369 216 2 2081 115 10 0 chr20 4486969 4487265 -67666617 + AluSx SINE Alu 1 299 -13 879 213 66 5 chr20 4487514 4487711 -67666171 + L1MC/D LINE L1 47 255 -6141 262 286 13 0 chr20 4487719 4487796 -67666086 + L1MC/D LINE L1 656 733 -5663 2279 274 33 55 chr20 4487797 4488698 -67665184 + L1MC/D LINE L1 808 1681 -4715 1946 128 0 3 chr20 4488698 4489009 -67664873 + AluSg SINE Alu 1 310 0 2279 274 33 55 chr20 4489009 4489254 -67664628 + L1MC/D LINE L1 1681 1930 -4466 4759 208 49 66 chr20 4489289 4489344 -67664538 + L1MC/D LINE L1 3662 3716 -2499 1624 183 0 7 chr20 4489344 4489666 -67664216 - AluJb SINE Alu 0 320 1 4759 208 49 66 chr20 4489666 4489815 -67664067 + L1MC/D LINE L1 3716 3866 -2349 1800 55 0 0 chr20 4489815 4490032 -67663850 + AluY SINE Alu 1 217 -94 4759 208 49 66 chr20 4490032 4490603 -67663279 + L1MC/D LINE L1 3866 4445 -1770 387 0 0 0 chr20 4490603 4490646 -67663236 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 2172 82 0 0 chr20 4490648 4490927 -67662955 - AluY SINE Alu -31 280 2 4759 208 49 66 chr20 4490927 4491652 -67662230 + L1MC/D LINE L1 4446 5143 -1072 1432 134 0 0 chr20 4491693 4491902 -67661980 - AluSq SINE Alu -104 209 1 702 209 65 44 chr20 4491904 4492199 -67661683 + L1MC/D LINE L1 5230 5526 -748 2382 73 0 0 chr20 4492205 4492507 -67661375 - AluSx SINE Alu -10 302 1 1931 183 38 60 chr20 4492554 4493023 -67660859 - MLT1C LTR MaLR -8 459 1 486 226 41 81 chr20 4493025 4493282 -67660600 + L1MC5 LINE L1 7238 7493 -519 743 182 38 44 chr20 4493314 4493473 -67660409 + FAM SINE Alu 1 158 -17 335 127 51 136 chr20 4493538 4493632 -67660250 - MER33 DNA MER1_type -2261 363 279 2297 92 3 9 chr20 4493632 4493947 -67659935 + AluSp SINE Alu 1 313 0 335 127 51 136 chr20 4493947 4493970 -67659912 - MER33 DNA MER1_type -2345 279 256 28 29 0 0 chr20 4493976 4494011 -67659871 + AT_rich Low_complexity Low_complexity 1 35 0 2037 217 133 16 chr20 4494058 4494556 -67659326 - MLT1E2 LTR MaLR -64 562 7 831 229 0 10 chr20 4494560 4494765 -67659117 - MER33 DNA MER1_type -121 203 1 371 301 75 49 chr20 4494765 4494991 -67658891 + L1MC4 LINE L1 7604 7835 -207 1659 219 30 30 chr20 4494991 4495398 -67658484 - LTR52 LTR ERVL -2 419 13 2232 89 3 0 chr20 4495401 4495704 -67658178 + AluSp SINE Alu 1 304 -9 873 217 6 0 chr20 4495724 4495881 -67658001 - LTR52-int LTR ERVL -1 3555 3398 554 220 28 44 chr20 4495891 4496073 -67657809 + L1M4 LINE L1 5150 5328 -818 600 191 14 7 chr20 4496079 4496220 -67657662 + L1 LINE L1 5190 5331 -815 2281 86 10 0 chr20 4496220 4496521 -67657361 + AluSx SINE Alu 1 304 -8 6017 233 42 44 chr20 4496524 4497138 -67656744 - LTR52-int LTR ERVL -1895 1661 1047 2104 108 0 0 chr20 4497138 4497433 -67656449 + AluSx SINE Alu 1 295 -17 6017 233 42 44 chr20 4497433 4498481 -67655401 - LTR52-int LTR ERVL -2509 1047 3 2133 108 0 0 chr20 4498584 4498880 -67655002 + AluSx SINE Alu 1 296 -16 1794 143 7 23 chr20 4499152 4499460 -67654422 + AluJo SINE Alu 1 303 -9 1989 116 0 0 chr20 4499482 4499758 -67654124 + AluSg SINE Alu 1 276 -34 198 0 0 0 chr20 4499761 4499783 -67654099 + (CAAAA)n Simple_repeat Simple_repeat 1 22 0 600 273 42 0 chr20 4499783 4499948 -67653934 + LTR52-int LTR ERVL 295 466 -3090 495 216 30 82 chr20 4499981 4500036 -67653846 + MIR SINE MIR 92 148 -114 2352 139 21 3 chr20 4500036 4500418 -67653464 - MLT1B LTR MaLR 0 390 2 495 216 30 82 chr20 4500418 4500496 -67653386 + MIR SINE MIR 148 218 -44 834 181 7 0 chr20 4500534 4500683 -67653199 - FRAM SINE Alu -26 150 1 231 146 0 0 chr20 4500693 4500734 -67653148 + (TC)n Simple_repeat Simple_repeat 2 42 0 1988 102 18 0 chr20 4500734 4501008 -67652874 - AluSx SINE Alu -32 280 2 540 158 338 0 chr20 4501276 4501409 -67652473 + MER5A DNA MER1_type 3 180 -9 229 279 79 50 chr20 4501508 4501648 -67652234 + L2 LINE L2 2614 2757 -557 525 335 56 19 chr20 4501727 4501942 -67651940 + MIR SINE MIR 24 246 -16 281 221 65 0 chr20 4502060 4502137 -67651745 + LTR16C LTR ERVL 71 152 -339 301 176 0 0 chr20 4502145 4502196 -67651686 + MIR SINE MIR 132 182 -80 639 210 123 0 chr20 4502884 4503022 -67650860 - MER45A DNA AcHobo -23 155 1 1132 204 133 31 chr20 4503474 4503924 -67649958 + LTR33 LTR ERVL 24 519 -2 265 381 8 0 chr20 4504233 4504351 -67649531 + (CAGG)n Simple_repeat Simple_repeat 1 119 0 484 292 119 0 chr20 4504604 4504789 -67649093 + MLT1K LTR MaLR 376 582 -6 269 308 33 0 chr20 4504889 4504980 -67648902 + MIR SINE MIR 39 132 -76 563 226 178 51 chr20 4505250 4505542 -67648340 + MLT1K LTR MaLR 212 540 -48 985 195 5 5 chr20 4505694 4505879 -67648003 + MER5A DNA MER1_type 3 187 -2 242 212 44 97 chr20 4505928 4506041 -67647841 + LTR16A1 LTR ERVL 20 126 -331 366 240 4 0 chr20 4506648 4506899 -67646983 + (TG)n Simple_repeat Simple_repeat 1 252 0 444 219 32 45 chr20 4507236 4507391 -67646491 + L1ME4a LINE L1 5967 6119 -2 1560 241 138 95 chr20 4507566 4507755 -67646127 - L1MC4 LINE L1 -63 7979 7800 1975 129 0 3 chr20 4507755 4508049 -67645833 - AluSx SINE Alu -19 293 1 1560 241 138 95 chr20 4508049 4509463 -67644419 - L1MC4 LINE L1 -242 7800 6448 787 143 0 30 chr20 4509463 4509596 -67644286 - FLAM_C SINE Alu -4 129 1 1560 241 138 95 chr20 4509596 4510039 -67643843 - L1MC4 LINE L1 -1594 6448 6025 2465 156 21 12 chr20 4510039 4510461 -67643421 - MSTB LTR MaLR 0 426 1 1560 241 138 95 chr20 4510461 4510612 -67643270 - L1MC4 LINE L1 -2017 6025 5593 483 63 0 0 chr20 4511177 4511240 -67642642 + (TTC)n Simple_repeat Simple_repeat 1 63 0 1905 136 33 0 chr20 4511243 4511721 -67642161 - AluSq SINE Alu 0 488 1 645 318 161 35 chr20 4511771 4511887 -67641995 - L2 LINE L2 -605 2709 2609 2005 131 0 0 chr20 4511887 4512192 -67641690 - AluSq SINE Alu -4 309 5 645 318 161 35 chr20 4512192 4512794 -67641088 - L2 LINE L2 -705 2609 1853 2153 68 0 24 chr20 4512794 4513087 -67640795 + AluSc SINE Alu 1 286 -23 645 318 161 35 chr20 4513087 4513269 -67640613 - L2 LINE L2 -1461 1853 1695 1995 125 3 0 chr20 4513281 4513577 -67640305 - AluSx SINE Alu -15 297 1 21 0 0 0 chr20 4513837 4513858 -67640024 + AT_rich Low_complexity Low_complexity 1 21 0 1249 96 0 11 chr20 4514668 4514846 -67639036 + FRAM SINE Alu 1 176 0 769 167 48 0 chr20 4514860 4515014 -67638868 + FLAM_C SINE Alu 2 161 0 2195 92 3 3 chr20 4515190 4515484 -67638398 + AluSc SINE Alu 1 294 -15 1564 151 0 89 chr20 4516126 4516450 -67637432 + AluJo SINE Alu 1 295 -17 429 276 58 1 chr20 4516637 4516754 -67637128 + MLT1J LTR MaLR 59 218 -286 836 169 0 0 chr20 4517006 4517148 -67636734 - FLAM_C SINE Alu -1 142 1 1889 123 0 36 chr20 4517197 4517506 -67636376 - AluSx SINE Alu -1 311 14 695 100 9 0 chr20 4517564 4517674 -67636208 + (TTCC)n Simple_repeat Simple_repeat 4 114 0 340 137 0 0 chr20 4517674 4517725 -67636157 + (TTTC)n Simple_repeat Simple_repeat 3 53 0 1562 179 11 0 chr20 4517725 4517998 -67635884 - AluJb SINE Alu -36 276 1 1761 154 3 7 chr20 4518001 4518329 -67635553 - AluSx SINE Alu 0 327 1 1926 104 4 0 chr20 4518340 4518608 -67635274 - AluSc SINE Alu -11 298 30 1050 311 58 22 chr20 4518681 4519444 -67634438 - L1M4 LINE L1 -2007 4139 3350 1667 142 46 0 chr20 4519552 4519834 -67634048 - AluSx SINE Alu -17 295 1 314 333 6 54 chr20 4519835 4520003 -67633879 - L1M4 LINE L1 -2984 3162 3003 1439 249 51 30 chr20 4520019 4520452 -67633430 - LTR16A1 LTR ERVL -15 442 1 574 130 130 26 chr20 4520482 4520597 -67633285 + FLAM_C SINE Alu 10 136 -7 244 294 51 65 chr20 4520647 4520812 -67633070 - L1M4 LINE L1 -3184 2962 2796 2154 92 0 0 chr20 4520812 4521129 -67632753 - AluY SINE Alu 0 317 1 244 294 51 65 chr20 4521129 4521456 -67632426 - L1M4 LINE L1 -3350 2796 2476 453 268 61 37 chr20 4521515 4521761 -67632121 + L1MEc LINE L1 1532 1783 -4613 2241 101 7 0 chr20 4521819 4522126 -67631756 - AluSp SINE Alu -4 309 1 2234 193 56 39 chr20 4522380 4522508 -67631374 + L1ME1 LINE L1 5260 5384 -782 1972 135 0 14 chr20 4522508 4522805 -67631077 + AluSx SINE Alu 1 293 -19 2234 193 56 39 chr20 4522805 4522935 -67630947 + L1ME1 LINE L1 5384 5510 -656 1061 174 12 0 chr20 4522935 4523107 -67630775 + FAM SINE Alu 1 174 -1 2234 193 56 39 chr20 4523107 4523588 -67630294 + L1ME1 LINE L1 5510 6165 -1 26 0 0 0 chr20 4523921 4523947 -67629935 + AT_rich Low_complexity Low_complexity 1 26 0 2003 145 61 112 chr20 4524049 4524539 -67629343 + L1MC2 LINE L1 5871 6335 -9 550 148 59 0 chr20 4524543 4524644 -67629238 + HsTC2 DNA Tc2 1610 1716 -182 1813 166 3 3 chr20 4524683 4524985 -67628897 - AluJb SINE Alu -10 302 1 226 163 0 0 chr20 4525007 4525050 -67628832 + HsTC2 DNA Tc2 1856 1898 0 389 145 66 163 chr20 4525050 4525219 -67628663 + HsTC2 DNA Tc2 1715 1851 -47 2134 99 0 3 chr20 4525219 4525511 -67628371 + AluSg SINE Alu 6 296 -14 389 145 66 163 chr20 4525511 4525556 -67628326 + HsTC2 DNA Tc2 1851 1899 1 955 198 0 0 chr20 4525686 4525863 -67628019 - FRAM SINE Alu -1 175 1 364 221 55 47 chr20 4525865 4525992 -67627890 + L1ME4a LINE L1 5966 6093 -28 854 118 47 16 chr20 4526025 4526152 -67627730 + FLAM_C SINE Alu 1 131 -2 1380 204 28 11 chr20 4526282 4526533 -67627349 + L1MB4 LINE L1 5883 6141 -39 1346 138 142 4 chr20 4526533 4526640 -67627242 + AluJo SINE Alu 1 92 -220 273 57 0 0 chr20 4526640 4526675 -67627207 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 1346 138 142 4 chr20 4526675 4526827 -67627055 + AluJo SINE Alu 92 296 -16 1380 204 28 11 chr20 4526827 4526860 -67627022 + L1MB4 LINE L1 6141 6172 -8 654 302 298 1 chr20 4526872 4527564 -67626318 - L2 LINE L2 -932 2382 1486 932 171 74 0 chr20 4527673 4527849 -67626033 + MER5A DNA MER1_type 1 189 0 185 211 19 0 chr20 4529047 4529099 -67624783 + CT-rich Low_complexity Low_complexity 2 54 0 877 134 8 0 chr20 4529897 4530031 -67623851 + AluJo SINE Alu 1 135 -177 2109 123 0 7 chr20 4530031 4530339 -67623543 + AluSp SINE Alu 1 306 -7 1965 126 0 46 chr20 4530370 4530695 -67623187 + AluSq SINE Alu 1 310 -3 357 189 0 14 chr20 4531010 4531084 -67622798 + MER53 DNA DNA 105 177 -12 7729 32 7 17 chr20 4531090 4532234 -67621648 - L1PA5 LINE L1 0 6154 5016 2820 13 0 0 chr20 4532234 4532551 -67621331 - AluYb8 SINE Alu -1 317 1 7729 32 7 17 chr20 4532551 4532749 -67621133 - L1PA5 LINE L1 -1138 5016 4818 2089 90 0 0 chr20 4532972 4533239 -67620643 + AluSq SINE Alu 1 267 -46 26 0 0 0 chr20 4533251 4533277 -67620605 + AT_rich Low_complexity Low_complexity 1 26 0 1649 102 0 8 chr20 4533295 4533531 -67620351 + AluSg/x SINE Alu 74 307 -5 302 214 258 0 chr20 4533531 4533610 -67620272 + MER5A DNA MER1_type 61 167 -22 393 316 58 36 chr20 4534355 4534579 -67619303 - MLT1H LTR MaLR -123 286 63 635 275 81 6 chr20 4534721 4535104 -67618778 + MLT1J2 LTR MaLR 3 450 0 305 280 137 30 chr20 4535282 4535450 -67618432 - MIR SINE MIR 0 262 77 456 179 60 0 chr20 4535776 4535860 -67618022 + MLT1C LTR MaLR 2 90 -377 311 244 16 57 chr20 4535874 4535997 -67617885 + (TATATG)n Simple_repeat Simple_repeat 3 120 0 261 219 16 0 chr20 4536019 4536035 -67617847 + MER39 LTR ERV1 6 20 -911 279 0 0 0 chr20 4536035 4536066 -67617816 + (CA)n Simple_repeat Simple_repeat 2 32 0 261 219 16 0 chr20 4536066 4536113 -67617769 + MER39 LTR ERV1 20 70 -861 1709 170 28 96 chr20 4536217 4536816 -67617066 + MER39 LTR ERV1 71 565 -201 1721 196 45 45 chr20 4536877 4536899 -67616983 + MER21B LTR ERV1 449 470 -393 1947 120 21 0 chr20 4536899 4537190 -67616692 - AluSx SINE Alu -15 297 1 1721 196 45 45 chr20 4537190 4537449 -67616433 + MER21B LTR ERV1 470 734 -129 2114 106 3 0 chr20 4537449 4537763 -67616119 + AluSp SINE Alu 1 315 0 1721 196 45 45 chr20 4537763 4537883 -67615999 + MER21B LTR ERV1 733 852 -11 1301 170 92 60 chr20 4537892 4537985 -67615897 + MLT1C LTR MaLR 86 175 -292 1978 103 33 0 chr20 4537985 4538288 -67615594 + AluSg SINE Alu 1 312 0 2140 79 4 0 chr20 4538297 4538608 -67615274 + AluY SINE Alu 1 312 0 1301 170 92 60 chr20 4538608 4538872 -67615010 + MLT1C LTR MaLR 182 467 0 880 242 82 35 chr20 4538875 4539222 -67614660 + MLT1H LTR MaLR 80 498 -57 1787 87 121 8 chr20 4539222 4539487 -67614395 + AluSx SINE Alu 1 295 -17 880 242 82 35 chr20 4539487 4539547 -67614335 + MLT1H LTR MaLR 498 554 -1 22 0 0 0 chr20 4539685 4539707 -67614175 + AT_rich Low_complexity Low_complexity 1 22 0 564 228 21 35 chr20 4539763 4539908 -67613974 - LTR67 LTR ERVL -379 178 36 286 325 98 8 chr20 4540078 4540201 -67613681 + MLT1K LTR MaLR 138 271 -317 361 212 185 20 chr20 4540442 4540456 -67613426 - MIR SINE MIR -56 206 196 2301 86 3 0 chr20 4540456 4540758 -67613124 - AluSx SINE Alu -9 303 1 361 212 185 20 chr20 4540758 4540894 -67612988 - MIR SINE MIR -66 196 31 262 194 19 68 chr20 4541366 4541469 -67612413 + (CGGGG)n Simple_repeat Simple_repeat 5 102 0 21 95 0 0 chr20 4541736 4541799 -67612083 + GC_rich Low_complexity Low_complexity 1 63 0 23 0 0 0 chr20 4541905 4541928 -67611954 + GC_rich Low_complexity Low_complexity 1 23 0 1137 326 126 35 chr20 4542706 4543469 -67610413 + L2 LINE L2 1603 2295 -1018 2370 88 0 0 chr20 4543469 4543776 -67610106 - AluSq SINE Alu -6 307 1 1137 326 126 35 chr20 4543776 4544555 -67609327 + L2 LINE L2 2295 3297 -16 607 236 188 0 chr20 4545344 4545509 -67608373 - MIR SINE MIR -26 236 41 258 286 11 55 chr20 4545528 4545619 -67608263 - MIR SINE MIR -169 93 7 511 221 105 70 chr20 4546905 4547011 -67606871 - MER5A DNA MER1_type -1 188 71 1699 130 71 22 chr20 4547011 4547307 -67606575 - AluSx SINE Alu 0 309 1 511 221 105 70 chr20 4547307 4547371 -67606511 - MER5A DNA MER1_type -118 71 11 343 232 45 18 chr20 4548053 4548165 -67605717 + MIR SINE MIR 34 148 -60 25 31 0 0 chr20 4548249 4548281 -67605601 + AT_rich Low_complexity Low_complexity 1 32 0 325 200 71 0 chr20 4548758 4548843 -67605039 - MER103 DNA DNA -46 120 30 203 61 0 30 chr20 4549067 4549100 -67604782 + MIR SINE MIR 109 140 -68 2165 114 0 0 chr20 4549388 4549687 -67604195 - AluSx SINE Alu -13 299 1 361 217 33 11 chr20 4549790 4549882 -67604000 + MIR SINE MIR 84 177 -85 188 222 22 0 chr20 4550255 4550300 -67603582 - L2 LINE L2 -557 2757 2712 2441 44 0 0 chr20 4550541 4550839 -67603043 - AluY SINE Alu -8 303 6 2145 91 42 0 chr20 4551770 4552056 -67601826 - AluSq SINE Alu -15 298 1 234 271 0 0 chr20 4552134 4552193 -67601689 + MIR SINE MIR 95 153 -109 393 282 113 15 chr20 4553038 4553263 -67600619 + MIR SINE MIR 11 258 -4 333 155 42 0 chr20 4554409 4554480 -67599402 + L2 LINE L2 3239 3312 -1 191 200 36 0 chr20 4555067 4555122 -67598760 + L2 LINE L2 2924 2980 -292 181 263 0 0 chr20 4555390 4555428 -67598454 - MIR SINE MIR -102 160 123 436 233 68 48 chr20 4555807 4555953 -67597929 - MER5B DNA MER1_type -8 170 22 2679 197 48 10 chr20 4556143 4556661 -67597221 - MLT1F LTR MaLR -4 538 1 343 203 203 72 chr20 4557032 4557170 -67596712 - MIR SINE MIR -82 180 25 1510 190 33 53 chr20 4557538 4557691 -67596191 - AluJo SINE Alu -8 294 148 2407 72 0 3 chr20 4557691 4557998 -67595884 - AluSg SINE Alu -4 306 1 1510 190 33 53 chr20 4557998 4558144 -67595738 - AluJo SINE Alu -154 148 1 311 198 74 12 chr20 4558351 4558432 -67595450 - MIR SINE MIR -112 150 65 916 188 0 0 chr20 4558999 4559153 -67594729 - AluJ SINE Alu -19 293 140 244 262 65 19 chr20 4560238 4560345 -67593537 - MIR3 SINE MIR -82 126 15 2344 87 0 0 chr20 4561191 4561501 -67592381 - AluSx SINE Alu -2 310 1 925 185 0 0 chr20 4561528 4561772 -67592110 - AluJo SINE Alu 0 364 121 795 129 16 8 chr20 4561812 4561936 -67591946 - AluJo SINE Alu -177 135 11 186 189 81 0 chr20 4562665 4562702 -67591180 + L2 LINE L2 3225 3264 -8 515 188 0 0 chr20 4563108 4563193 -67590689 - AluSg/x SINE Alu -9 301 217 180 0 0 0 chr20 4563921 4563941 -67589941 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 1563 268 44 24 chr20 4565744 4566285 -67587597 - L1ME3 LINE L1 -21 6141 5590 199 197 0 30 chr20 4567414 4567480 -67586402 + CT-rich Low_complexity Low_complexity 4 67 0 1859 115 0 4 chr20 4568664 4568924 -67584958 - AluSx SINE Alu -11 301 43 447 257 0 18 chr20 4569026 4569139 -67584743 - MLT1H LTR MaLR -438 111 1 28 86 0 0 chr20 4570403 4570473 -67583409 + AT_rich Low_complexity Low_complexity 1 70 0 840 213 66 5 chr20 4570542 4570679 -67583203 + MER3 DNA MER1_type 1 155 -54 2156 106 10 0 chr20 4570679 4570981 -67582901 - AluSg SINE Alu -5 305 1 840 213 66 5 chr20 4570981 4571040 -67582842 + MER3 DNA MER1_type 155 209 0 405 215 58 0 chr20 4571050 4571184 -67582698 - L1M4 LINE L1 -1979 4167 4020 2323 103 3 0 chr20 4571315 4571627 -67582255 - AluSp SINE Alu 0 313 1 553 310 92 50 chr20 4571860 4572241 -67581641 - MARNA DNA Mariner -122 464 68 778 234 49 0 chr20 4572285 4572469 -67581413 + MIR SINE MIR 21 213 -49 270 367 110 4 chr20 4573177 4573414 -67580468 + L2 LINE L2 2715 2976 -338 215 194 235 20 chr20 4573515 4573613 -67580269 + L2 LINE L2 3138 3256 -16 564 176 126 75 chr20 4576545 4576621 -67577261 - MER3 DNA MER1_type 0 209 138 1877 141 3 66 chr20 4576621 4576940 -67576942 - AluJb SINE Alu -13 299 1 564 176 126 75 chr20 4576940 4577062 -67576820 - MER3 DNA MER1_type -71 138 1 843 250 58 43 chr20 4577574 4577850 -67576032 - MLT1J LTR MaLR -199 312 33 443 95 0 0 chr20 4577862 4577925 -67575957 + FRAM/FAM SINE Alu 24 86 -90 287 116 0 0 chr20 4578014 4578057 -67575825 + MER5A DNA MER1_type 33 75 -114 1606 127 5 0 chr20 4578057 4578277 -67575605 + AluSg/x SINE Alu 84 304 -6 21 0 0 0 chr20 4578306 4578327 -67575555 + AT_rich Low_complexity Low_complexity 1 21 0 1606 127 5 0 chr20 4578341 4578561 -67575321 + AluSg/x SINE Alu 84 304 -6 326 237 76 42 chr20 4578610 4578677 -67575205 + MER5A DNA MER1_type 61 135 -54 1792 160 0 20 chr20 4578677 4578970 -67574912 + AluJo SINE Alu 14 300 -12 326 237 76 42 chr20 4578970 4579020 -67574862 + MER5A DNA MER1_type 135 182 -7 307 335 112 61 chr20 4579112 4579488 -67574394 + L2 LINE L2 2870 3264 -8 * 570 245 82 19 chr20 4579485 4579702 -67574180 - MIR SINE MIR 0 262 40 2436 84 3 0 chr20 4580747 4581058 -67572824 - AluSx SINE Alu 0 312 1 927 157 0 0 chr20 4581238 4581372 -67572510 + FRAM SINE Alu 28 161 -15 834 167 0 0 chr20 4581497 4581617 -67572265 + FLAM_C SINE Alu 1 120 -23 332 308 18 18 chr20 4581672 4581841 -67572041 + (CA)n Simple_repeat Simple_repeat 2 170 0 1188 156 35 25 chr20 4582180 4582379 -67571503 - AluJo SINE Alu -28 284 84 250 282 13 0 chr20 4582400 4582478 -67571404 + (CA)n Simple_repeat Simple_repeat 2 80 0 2161 126 7 0 chr20 4582585 4582879 -67571003 - AluSx SINE Alu -16 296 1 229 250 38 0 chr20 4583054 4583134 -67570748 - L1MC4a LINE L1 -1868 5940 5858 2390 103 0 3 chr20 4583136 4583448 -67570434 + AluSq SINE Alu 1 311 -2 221 287 210 7 chr20 4583842 4583985 -67569897 - MIR SINE MIR -10 252 81 1716 248 79 46 chr20 4584087 4584404 -67569478 + L1ME3 LINE L1 5533 5880 -282 1851 168 14 0 chr20 4584404 4584719 -67569163 + AluJb SINE Alu 1 319 0 1716 248 79 46 chr20 4584719 4584968 -67568914 + L1ME3 LINE L1 5880 6119 -43 271 261 57 11 chr20 4586674 4586762 -67567120 + MLT1K LTR MaLR 494 585 -3 998 283 130 41 chr20 4586999 4587828 -67566054 + L2 LINE L2 2336 3311 -2 2460 68 19 3 chr20 4588639 4588947 -67564935 + AluSp SINE Alu 1 313 0 1668 135 8 4 chr20 4589356 4589600 -67564282 + AluSp SINE Alu 1 245 -68 1289 249 63 89 chr20 4589618 4590038 -67563844 - L1ME3A LINE L1 -26 6144 5714 2303 123 0 0 chr20 4590038 4590348 -67563534 + AluSg SINE Alu 1 310 0 1289 249 63 89 chr20 4590348 4590417 -67563465 - L1ME3A LINE L1 -456 5714 5670 2462 97 0 0 chr20 4590417 4590728 -67563154 - AluSx SINE Alu -1 311 1 1289 249 63 89 chr20 4590728 4590807 -67563075 - L1ME3A LINE L1 -500 5670 5590 583 218 177 0 chr20 4591199 4591346 -67562536 + MER5A DNA MER1_type 4 176 -13 474 257 70 23 chr20 4591602 4591707 -67562175 + MER5A DNA MER1_type 4 121 -68 2781 148 4 40 chr20 4591707 4591926 -67561956 - MER66B LTR ERV1 -4 482 257 2622 44 3 0 chr20 4591926 4592223 -67561659 - AluY SINE Alu -13 298 1 2781 148 4 40 chr20 4592223 4592503 -67561379 - MER66B LTR ERV1 -229 257 1 474 257 70 23 chr20 4592503 4592568 -67561314 + MER5A DNA MER1_type 121 182 -7 188 245 102 0 chr20 4592582 4592631 -67561251 - MER5B DNA MER1_type 0 178 125 351 135 58 106 chr20 4592666 4592723 -67561159 - MER5B DNA MER1_type -2 176 125 2236 88 39 20 chr20 4592723 4592860 -67561022 + AluSx SINE Alu 1 134 -178 2278 102 0 13 chr20 4592860 4593165 -67560717 + AluSq SINE Alu 1 301 -12 2236 88 39 20 chr20 4593165 4593333 -67560549 + AluSx SINE Alu 134 312 0 351 135 58 106 chr20 4593333 4593379 -67560503 - MER5B DNA MER1_type -53 125 78 455 323 45 15 chr20 4593438 4593639 -67560243 - ERVL LTR ERVL -3508 2256 2050 1839 125 3 44 chr20 4594019 4594316 -67559566 - AluSx SINE Alu -10 302 18 1795 163 7 17 chr20 4594410 4594710 -67559172 - AluJo SINE Alu -15 297 1 1119 279 70 52 chr20 4594712 4594748 -67559134 - L1ME3A LINE L1 0 6170 6136 3001 127 6 31 chr20 4594748 4594922 -67558960 + MER70A LTR ERVL 1 178 -294 2327 93 7 3 chr20 4594922 4595224 -67558658 + AluSx SINE Alu 3 305 -7 3001 127 6 31 chr20 4595224 4595531 -67558351 + MER70A LTR ERVL 178 470 -2 1119 279 70 52 chr20 4595531 4595882 -67558000 - L1ME3A LINE L1 -34 6136 5793 2343 103 0 6 chr20 4595882 4596193 -67557689 - AluSq SINE Alu -4 309 1 1119 279 70 52 chr20 4596193 4596227 -67557655 - L1ME3A LINE L1 -377 5793 5761 2221 114 0 0 chr20 4596227 4596526 -67557356 - AluSx SINE Alu -6 306 8 1119 279 70 52 chr20 4596526 4596734 -67557148 - L1ME3A LINE L1 -409 5761 5528 520 223 11 0 chr20 4596734 4596828 -67557054 + MER70A LTR ERVL 128 222 -250 314 176 0 0 chr20 4596842 4596893 -67556989 - MER70A LTR ERVL -139 333 283 523 192 0 0 chr20 4596921 4597041 -67556841 - L1M4 LINE L1 -2454 3692 3573 574 101 0 0 chr20 4597044 4597169 -67556713 + AluSp/q SINE Alu 205 329 0 365 238 159 24 chr20 4597169 4597295 -67556587 - L1M4 LINE L1 -2567 3579 3437 628 260 49 4 chr20 4597308 4597554 -67556328 - L1M4 LINE L1 -2932 3214 2958 * 2781 229 23 26 chr20 4597545 4597801 -67556081 - L1M4 LINE L1 -2812 3334 3079 2587 161 23 73 chr20 4597801 4598342 -67555540 - LTR9 LTR ERV1 0 612 107 2334 96 3 0 chr20 4598342 4598635 -67555247 + AluSq SINE Alu 1 294 -19 2587 161 23 73 chr20 4598635 4598737 -67555145 - LTR9 LTR ERV1 -505 107 1 2781 229 23 26 chr20 4598737 4599092 -67554790 - L1M4 LINE L1 -3067 3079 2724 2596 115 74 5 chr20 4599092 4599526 -67554356 + MER4C LTR ERV1 1 464 -1 2781 229 23 26 chr20 4599526 4599754 -67554128 - L1M4 LINE L1 -3422 2724 2497 2759 153 68 10 chr20 4599764 4600013 -67553869 - L1MC3 LINE L1 -8 7777 7544 2707 182 109 78 chr20 4600013 4600321 -67553561 + MER21B LTR ERV1 1 298 -565 1496 201 30 27 chr20 4600321 4600620 -67553262 + AluJo SINE Alu 1 300 -12 2707 182 109 78 chr20 4600620 4600847 -67553035 + MER21B LTR ERV1 298 516 -347 2506 92 0 0 chr20 4600847 4601151 -67552731 + AluSx SINE Alu 1 304 -8 2707 182 109 78 chr20 4601151 4601449 -67552433 + MER21B LTR ERV1 516 861 -2 2759 153 68 10 chr20 4601449 4601546 -67552336 - L1MC3 LINE L1 -241 7544 7454 2375 103 3 7 chr20 4601546 4601856 -67552026 - AluSq SINE Alu 0 313 5 2759 153 68 10 chr20 4601856 4602083 -67551799 - L1MC3 LINE L1 -331 7454 7170 1634 136 0 0 chr20 4602111 4602332 -67551550 - AluSx SINE Alu -91 221 1 263 305 12 0 chr20 4602544 4602626 -67551256 - L1ME LINE L1 -542 5579 5497 2370 84 0 3 chr20 4602659 4602958 -67550924 + AluSg SINE Alu 1 298 -12 397 233 78 3 chr20 4603319 4603434 -67550448 + MLT1I LTR MaLR 65 171 -238 721 121 60 0 chr20 4603984 4604100 -67549782 + FLAM_A SINE Alu 1 123 -10 21 0 0 0 chr20 4604107 4604128 -67549754 + AT_rich Low_complexity Low_complexity 1 21 0 2017 161 3 0 chr20 4604282 4604592 -67549290 + AluJo SINE Alu 1 311 -1 2336 98 16 7 chr20 4605015 4605321 -67548561 + AluSp SINE Alu 1 309 -4 346 239 8 62 chr20 4605413 4605543 -67548339 + L2 LINE L2 2523 2645 -669 * 841 267 160 11 chr20 4605530 4605904 -67547978 + L2 LINE L2 2884 3313 0 2350 97 0 6 chr20 4606724 4607035 -67546847 - AluSc SINE Alu 0 309 1 2150 114 19 10 chr20 4607062 4607370 -67546512 + AluSx SINE Alu 1 311 -1 284 278 14 0 chr20 4607526 4607598 -67546284 + MLT1L LTR MaLR 1 73 -542 498 129 24 0 chr20 4607626 4607711 -67546171 - MER58 DNA MER1_type -3 2417 2331 315 153 42 14 chr20 4607716 4607788 -67546094 - MER58 DNA MER1_type -188 153 80 2448 85 0 28 chr20 4607792 4607926 -67545956 + AluSx SINE Alu 1 137 -175 2507 68 0 10 chr20 4607926 4608236 -67545646 + AluY SINE Alu 1 307 -4 2448 85 0 28 chr20 4608236 4608418 -67545464 + AluSx SINE Alu 137 308 -4 201 74 0 0 chr20 4609293 4609320 -67544562 + (A)n Simple_repeat Simple_repeat 1 27 0 4032 128 2 11 chr20 4611320 4611835 -67542047 + MER41B LTR ERV1 1 510 -125 2361 87 37 3 chr20 4611835 4612133 -67541749 - AluSq SINE Alu -5 308 1 4032 128 2 11 chr20 4612133 4612258 -67541624 + MER41B LTR ERV1 510 635 0 680 155 43 183 chr20 4614883 4615089 -67538793 + Charlie4a DNA MER1_type 2 141 -1820 2393 177 101 18 chr20 4615089 4615604 -67538278 + LTR64 LTR ERVK 1 558 0 680 155 43 183 chr20 4615604 4615746 -67538136 + Charlie4a DNA MER1_type 141 301 -207 396 157 56 111 chr20 4615752 4615860 -67538022 + L1M4 LINE L1 4829 4930 -1216 838 237 23 0 chr20 4615860 4616075 -67537807 + Charlie4a DNA MER1_type 286 505 -3 2232 121 12 3 chr20 4616229 4616575 -67537307 + MER47A DNA MER2_type 2 350 -16 2480 79 3 10 chr20 4617638 4617943 -67535939 - AluSg SINE Alu -7 303 1 1865 154 40 3 chr20 4618059 4618358 -67535524 - AluSx SINE Alu 0 312 3 1191 245 155 19 chr20 4618966 4619398 -67534484 - LTR16C LTR ERVL 0 491 1 192 167 146 0 chr20 4619877 4619925 -67533957 + L2 LINE L2 2920 2974 -298 216 317 80 38 chr20 4620074 4620336 -67533546 + L2 LINE L2 2392 2664 -650 488 144 0 11 chr20 4620337 4620427 -67533455 + (TTCC)n Simple_repeat Simple_repeat 3 91 0 963 54 0 0 chr20 4620440 4620551 -67533331 - AluSq/x SINE Alu -202 111 1 341 276 22 67 chr20 4620552 4620686 -67533196 + L2 LINE L2 2615 2742 -572 184 306 0 0 chr20 4621136 4621185 -67532697 - L2 LINE L2 -14 3299 3251 231 340 57 0 chr20 4621242 4621348 -67532534 + L2 LINE L2 1314 1425 -1889 757 205 227 4 chr20 4621678 4621951 -67531931 + L2 LINE L2 2015 2348 -966 * 964 247 37 72 chr20 4621944 4622345 -67531537 - L2 LINE L2 -96 3217 2831 749 283 148 24 chr20 4622343 4623031 -67530851 + L2 LINE L2 2542 3309 -4 * 516 86 21 21 chr20 4623637 4623730 -67530152 + (TTTC)n Simple_repeat Simple_repeat 2 94 0 1669 173 73 0 chr20 4623742 4623908 -67529974 - AluJo SINE Alu -2 310 157 276 30 0 0 chr20 4623908 4623941 -67529941 + (TTA)n Simple_repeat Simple_repeat 2 34 0 1669 173 73 0 chr20 4623941 4624063 -67529819 - AluJo SINE Alu -155 157 1 213 229 48 60 chr20 4624104 4624187 -67529695 + L2 LINE L2 3191 3272 0 2362 101 3 3 chr20 4624549 4624857 -67529025 - AluSq SINE Alu -4 309 2 969 224 137 25 chr20 4625306 4625664 -67528218 + LTR16A1 LTR ERVL 7 404 -53 728 206 0 0 chr20 4625666 4625797 -67528085 + FLAM_A SINE Alu 2 132 -1 1837 167 0 4 chr20 4625822 4626091 -67527791 + AluJb SINE Alu 1 268 -44 295 175 16 0 chr20 4626199 4626262 -67527620 + LTR16A1 LTR ERVL 394 457 0 852 266 18 9 chr20 4627372 4627601 -67526281 - L2 LINE L2 -250 3063 2833 248 272 12 25 chr20 4628025 4628106 -67525776 + CT-rich Low_complexity Low_complexity 2 81 0 866 209 102 10 chr20 4628781 4628977 -67524905 + MIR SINE MIR 20 233 -29 198 320 78 31 chr20 4629075 4629203 -67524679 - L2 LINE L2 -822 2492 2359 1337 196 220 14 chr20 4629250 4629669 -67524213 + MLT1D LTR MaLR 1 505 0 821 133 0 66 chr20 4629912 4630063 -67523819 + FRAM SINE Alu 23 163 -13 183 80 0 0 chr20 4630104 4630129 -67523753 + (A)n Simple_repeat Simple_repeat 1 25 0 1540 95 30 22 chr20 4630302 4630481 -67523401 - AluSg/x SINE Alu -11 301 118 234 0 0 0 chr20 4630481 4630507 -67523375 + (TTTA)n Simple_repeat Simple_repeat 1 26 0 1540 95 30 22 chr20 4630507 4630558 -67523324 - AluSg/x SINE Alu -194 118 69 2222 92 0 16 chr20 4630610 4630924 -67522958 + AluSx SINE Alu 1 309 -3 375 212 118 0 chr20 4631360 4631445 -67522437 - MER63 DNA MER1_type -338 724 4 2083 246 97 69 chr20 4632065 4633156 -67520726 + L1MC5 LINE L1 6698 7777 -184 2165 107 7 0 chr20 4633156 4633456 -67520426 + AluSx SINE Alu 1 302 -10 2083 246 97 69 chr20 4633456 4633612 -67520270 + L1MC5 LINE L1 7777 7927 -34 1435 146 18 98 chr20 4633758 4634093 -67519789 + L1MB1 LINE L1 5860 6167 -1 22 0 0 0 chr20 4634094 4634116 -67519766 + AT_rich Low_complexity Low_complexity 1 22 0 221 208 21 0 chr20 4634184 4634232 -67519650 - L2 LINE L2 -1 3271 3223 1140 249 46 51 chr20 4634595 4634968 -67518914 - L1ME3 LINE L1 -51 6111 5741 225 65 0 0 chr20 4635503 4635534 -67518348 + (TG)n Simple_repeat Simple_repeat 2 32 0 281 278 19 37 chr20 4637885 4637993 -67515889 + L1ME3A LINE L1 5843 5948 -222 447 242 115 73 chr20 4638629 4638794 -67515088 - MIR SINE MIR -83 179 8 449 288 89 67 chr20 4638806 4639223 -67514659 - L2 LINE L2 -35 3237 2812 395 316 32 7 chr20 4639368 4639523 -67514359 - L2 LINE L2 -513 2801 2643 312 180 22 22 chr20 4641555 4641644 -67512238 + L1MB7 LINE L1 6096 6184 0 1474 199 0 7 chr20 4641685 4641989 -67511893 - AluJb SINE Alu 0 303 2 247 301 0 36 chr20 4642051 4642134 -67511748 - L2 LINE L2 -2 3311 3232 708 216 5 90 chr20 4642136 4642358 -67511524 - MLT1D LTR MaLR -302 203 1 529 303 34 6 chr20 4642417 4642595 -67511287 - MIR SINE MIR -55 207 25 211 226 57 0 chr20 4642852 4642905 -67510977 - L2 LINE L2 -2 3311 3256 233 272 12 0 chr20 4643750 4643831 -67510051 - L1ME LINE L1 -269 5852 5771 805 148 51 120 chr20 4644094 4644258 -67509624 + MER3 DNA MER1_type 2 149 -60 677 208 0 0 chr20 4644258 4644383 -67509499 - FLAM_A SINE Alu -8 125 1 805 148 51 120 chr20 4644383 4644434 -67509448 + MER3 DNA MER1_type 149 202 -7 21 57 0 0 chr20 4644503 4644538 -67509344 + AT_rich Low_complexity Low_complexity 1 35 0 1832 155 0 0 chr20 4644600 4644897 -67508985 - AluSg SINE Alu -13 297 1 27 29 0 0 chr20 4644897 4644931 -67508951 + AT_rich Low_complexity Low_complexity 1 34 0 1226 136 11 0 chr20 4644947 4645138 -67508744 - AluJb SINE Alu -119 193 1 233 240 13 40 chr20 4645146 4645221 -67508661 + MER113 DNA MER1_type? 439 511 -10 1299 164 8 4 chr20 4645649 4645887 -67507995 - AluSg SINE Alu -8 302 64 246 189 0 0 chr20 4645987 4646024 -67507858 - Alu SINE Alu -265 37 1 2391 64 0 3 chr20 4646039 4646336 -67507546 - AluSc SINE Alu -13 296 1 248 233 0 27 chr20 4646338 4646411 -67507471 - L1MC4a LINE L1 -1868 5940 5870 545 256 40 74 chr20 4646413 4646589 -67507293 + MIR SINE MIR 61 230 -32 1792 172 3 0 chr20 4646603 4646906 -67506976 - AluJb SINE Alu -8 304 1 1920 95 74 7 chr20 4646919 4647204 -67506678 - AluSx SINE Alu -8 304 1 880 296 57 55 chr20 4647216 4647729 -67506153 - L1MC4a LINE L1 -1993 5815 5302 26 50 0 0 chr20 4648130 4648170 -67505712 + AT_rich Low_complexity Low_complexity 1 40 0 2122 120 0 0 chr20 4648288 4648589 -67505293 + AluSg SINE Alu 1 301 -9 256 130 87 0 chr20 4648750 4648796 -67505086 - L2 LINE L2 -6 3307 3258 2162 233 33 43 chr20 4649399 4649415 -67504467 - L1M4c LINE L1 -4586 2371 2356 2093 94 16 13 chr20 4649415 4649722 -67504160 - AluSc SINE Alu -1 308 1 2162 233 33 43 chr20 4649722 4650443 -67503439 - L1M4c LINE L1 -4601 2356 1606 2034 109 0 0 chr20 4650444 4650720 -67503162 + AluSc SINE Alu 1 276 -33 1963 141 41 69 chr20 4650899 4651245 -67502637 - L1MC1 LINE L1 -143 6190 5855 2176 104 0 16 chr20 4651245 4651553 -67502329 - AluSx SINE Alu -9 303 1 1963 141 41 69 chr20 4651553 4651596 -67502286 - L1MC1 LINE L1 -478 5855 5812 1125 238 34 3 chr20 4651595 4651919 -67501963 + L1ME4a LINE L1 2152 2485 -3661 * 10952 140 95 50 chr20 4651929 4654251 -67499631 - L1MCa LINE L1 -3997 2429 5 239 267 50 25 chr20 4654813 4654933 -67498949 - L1M4 LINE L1 -3161 2985 2863 181 219 0 24 chr20 4655014 4655055 -67498827 + L2 LINE L2 3229 3268 -4 1799 227 59 70 chr20 4655312 4655907 -67497975 - MER77 LTR ERV1 -3 602 54 1592 293 107 20 chr20 4656322 4657595 -67496287 + L1ME4a LINE L1 2877 4260 -1886 249 250 75 66 chr20 4657997 4658134 -67495748 + L1ME4a LINE L1 5858 5999 -122 2065 118 10 0 chr20 4658134 4658431 -67495451 + AluSx SINE Alu 5 304 -8 249 250 75 66 chr20 4658431 4658521 -67495361 + L1ME4a LINE L1 5999 6087 -34 287 224 0 0 chr20 4659810 4659859 -67494023 + MER91B DNA MER1_type 4 52 -138 674 222 25 76 chr20 4660347 4660545 -67493337 - MIR SINE MIR 0 262 75 371 178 204 25 chr20 4660552 4660701 -67493181 + MLT1H LTR MaLR 53 310 -239 403 237 161 79 chr20 4660977 4661306 -67492576 - MER90 LTR ERV1 -219 356 1 272 30 0 0 chr20 4661785 4661818 -67492064 + MADE1 DNA Mariner 6 38 -42 439 293 97 49 chr20 4662309 4662646 -67491236 + HAL1b LINE L1 219 563 -785 382 85 34 0 chr20 4662652 4662711 -67491171 - MLT2C1 LTR ERVL 0 520 460 251 158 58 42 chr20 4662712 4662832 -67491050 + (TATAA)n Simple_repeat Simple_repeat 4 125 0 224 137 69 8 chr20 4662878 4663009 -67490873 + (TA)n Simple_repeat Simple_repeat 2 140 0 213 196 0 0 chr20 4663030 4663076 -67490806 + (TATG)n Simple_repeat Simple_repeat 3 48 0 1777 160 66 0 chr20 4663206 4663525 -67490357 - MLT2C1 LTR ERVL -57 340 1 1192 133 0 0 chr20 4663569 4663742 -67490140 + AluSp SINE Alu 134 306 -7 22 0 0 0 chr20 4664112 4664134 -67489748 + AT_rich Low_complexity Low_complexity 1 22 0 915 190 0 22 chr20 4664256 4664435 -67489447 + MER5B DNA MER1_type 4 178 0 239 242 0 16 chr20 4664583 4664645 -67489237 + MER5A DNA MER1_type 9 69 -120 405 369 77 45 chr20 4664661 4664782 -67489100 + L2 LINE L2 2624 2740 -532 3463 154 43 60 chr20 4664782 4665485 -67488397 + LTR8 LTR ERV1 1 691 0 405 369 77 45 chr20 4665485 4665803 -67488079 + L2 LINE L2 2740 3087 -185 5342 76 18 7 chr20 4665803 4666537 -67487345 + L1PA13 LINE L1 5419 6160 -3 405 369 77 45 chr20 4666537 4666685 -67487197 + L2 LINE L2 3087 3229 -43 1288 254 80 15 chr20 4667655 4668132 -67485750 + HAL1 LINE L1 1705 2212 -295 5330 136 12 16 chr20 4668195 4669041 -67484841 + MER4D LTR ERV1 62 903 0 243 286 128 36 chr20 4669041 4669761 -67484121 - L1M4 LINE L1 -748 5398 4613 267 165 66 11 chr20 4669791 4669882 -67484000 + (TTAAA)n Simple_repeat Simple_repeat 4 99 0 532 321 103 26 chr20 4669922 4670271 -67483611 + L1M4 LINE L1 2390 2765 -3381 283 214 18 18 chr20 4670410 4670522 -67483360 + (CCG)n Simple_repeat Simple_repeat 2 113 0 22 56 0 0 chr20 4670770 4670806 -67483076 + GC_rich Low_complexity Low_complexity 1 36 0 476 251 150 24 chr20 4671752 4671959 -67481923 + MIR SINE MIR 7 239 -23 289 340 52 43 chr20 4673241 4673565 -67480317 + L2 LINE L2 2304 2630 -684 276 100 0 0 chr20 4674025 4674065 -67479817 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 893 94 0 24 chr20 4674066 4674193 -67479689 - FLAM_C SINE Alu -19 124 1 2201 87 10 0 chr20 4674373 4674672 -67479210 + AluSc SINE Alu 1 302 -7 254 252 165 52 chr20 4674978 4675093 -67478789 + MIR3 SINE MIR 33 160 -48 1710 159 3 37 chr20 4675148 4675469 -67478413 + AluJb SINE Alu 1 310 -2 245 352 0 0 chr20 4675695 4675766 -67478116 + HAL1 LINE L1 14 84 -2423 482 261 31 15 chr20 4676063 4676133 -67477749 - L2 LINE L2 0 3313 3246 186 43 0 0 chr20 4676133 4676156 -67477726 + (TA)n Simple_repeat Simple_repeat 2 24 0 1628 160 0 42 chr20 4676157 4676469 -67477413 - AluJo SINE Alu -13 299 1 482 261 31 15 chr20 4676469 4676526 -67477356 - L2 LINE L2 -66 3247 3182 704 289 97 62 chr20 4677454 4677886 -67475996 - MLT1J2 LTR MaLR -3 447 1 258 229 16 16 chr20 4678986 4679047 -67474835 + MIR SINE MIR 92 152 -110 471 277 125 64 chr20 4679944 4680287 -67473595 + MLT1I LTR MaLR 46 409 0 434 263 126 11 chr20 4680352 4680527 -67473355 + L1ME LINE L1 5566 5760 -410 220 362 31 6 chr20 4680630 4680793 -67473089 - L2 LINE L2 -1620 1694 1528 1702 230 69 17 chr20 4681195 4681599 -67472283 - MER89-int LTR ERV1 -4582 2219 1795 471 18 0 0 chr20 4681706 4681762 -67472120 + (TA)n Simple_repeat Simple_repeat 1 56 0 1901 143 6 25 chr20 4681787 4682101 -67471781 - MLT2C1 LTR ERVL -59 338 31 4161 244 110 48 chr20 4682102 4683596 -67470286 - MER89-int LTR ERV1 -5212 1589 3 1961 154 63 48 chr20 4683598 4683920 -67469962 - MER89 LTR ERV1 0 559 128 1760 164 43 0 chr20 4683920 4684219 -67469663 + AluJb SINE Alu 1 312 0 1961 154 63 48 chr20 4684219 4684344 -67469538 - MER89 LTR ERV1 -431 128 6 1091 121 86 0 chr20 4685209 4685261 -67468621 - AluSx SINE Alu -123 189 143 290 45 23 0 chr20 4685261 4685305 -67468577 + (TTTA)n Simple_repeat Simple_repeat 2 46 0 1091 121 86 0 chr20 4685305 4685426 -67468456 - AluSx SINE Alu -169 143 1 506 347 155 14 chr20 4685440 4685773 -67468109 - L2 LINE L2 0 3313 2902 9211 45 1 0 chr20 4685773 4686843 -67467039 - MER11C LTR ERVK 0 1071 1 506 347 155 14 chr20 4686843 4686947 -67466935 - L2 LINE L2 -411 2902 2814 1116 143 5 69 chr20 4687053 4687269 -67466613 + AluJb SINE Alu 1 202 -110 867 104 0 30 chr20 4687269 4687403 -67466479 - AluSg/x SINE Alu -10 302 173 657 167 9 0 chr20 4687403 4687511 -67466371 + AluJb SINE Alu 190 298 -14 498 278 200 4 chr20 4687708 4687978 -67465904 - L2 LINE L2 0 3313 2991 1145 279 141 39 chr20 4688117 4688414 -67465468 - L2 LINE L2 -706 2608 2342 1609 149 26 48 chr20 4688414 4688723 -67465159 - AluJo SINE Alu -10 302 1 1145 279 141 39 chr20 4688723 4689136 -67464746 - L2 LINE L2 -972 2342 1826 255 315 9 9 chr20 4689144 4689277 -67464605 + L1P4 LINE L1 5351 5483 -671 1511 177 46 87 chr20 4689564 4689793 -67464089 - MLT1A2 LTR MaLR 0 374 166 1993 138 0 0 chr20 4689793 4690089 -67463793 - AluJb SINE Alu -11 301 6 1511 177 46 87 chr20 4690089 4690249 -67463633 - MLT1A2 LTR MaLR -208 166 1 1966 159 8 74 chr20 4690382 4690773 -67463109 - MLT1A1 LTR MaLR 0 365 1 345 145 0 0 chr20 4690793 4690855 -67463027 + (T)n Simple_repeat Simple_repeat 1 62 0 1993 131 0 7 chr20 4690876 4691181 -67462701 - AluSg SINE Alu -7 303 1 325 197 39 55 chr20 4691197 4691324 -67462558 - L1M4 LINE L1 -2123 4521 4397 188 234 62 47 chr20 4691997 4692061 -67461821 + L2 LINE L2 1764 1828 -1486 989 192 12 0 chr20 4692115 4692282 -67461600 - FAM SINE Alu -6 169 1 729 177 0 0 chr20 4692300 4692424 -67461458 - L1ME3A LINE L1 -5 6165 6042 22 0 0 0 chr20 4692813 4692835 -67461047 + AT_rich Low_complexity Low_complexity 1 22 0 2245 67 0 3 chr20 4692844 4693152 -67460730 + AluY SINE Alu 1 307 0 1708 178 57 22 chr20 4693153 4693519 -67460363 - L1MB8 LINE L1 -7 6171 5793 774 164 47 8 chr20 4693539 4693667 -67460215 + FLAM_C SINE Alu 1 133 0 5025 185 22 100 chr20 4693672 4694663 -67459219 - L1M4 LINE L1 -5350 1192 324 1929 129 28 0 chr20 4694663 4694950 -67458932 - AluSx SINE Alu -17 295 1 5025 185 22 100 chr20 4694950 4695251 -67458631 - L1M4 LINE L1 -6218 324 1 1966 66 66 4 chr20 4695254 4695513 -67458369 - THE1C LTR MaLR 0 375 101 949 254 108 20 chr20 4695512 4695854 -67458028 + MLT1L LTR MaLR 243 614 -1 * 2281 81 0 0 chr20 4696578 4696876 -67457006 - AluY SINE Alu -13 298 1 770 128 43 0 chr20 4697014 4697131 -67456751 - AluJo SINE Alu -176 136 15 217 354 66 21 chr20 4697445 4697644 -67456238 + MIR SINE MIR 2 206 -56 1800 247 42 6 chr20 4697672 4698145 -67455737 - LTR16C LTR ERVL 0 491 2 198 279 16 16 chr20 4700239 4700300 -67453582 + L2 LINE L2 3004 3064 -208 200 94 0 31 chr20 4700380 4700412 -67453470 + (TCC)n Simple_repeat Simple_repeat 3 33 0 234 0 0 0 chr20 4702250 4702276 -67451606 + (TC)n Simple_repeat Simple_repeat 1 26 0 549 299 12 46 chr20 4703964 4704205 -67449677 - L1MC4a LINE L1 -1894 5914 5682 637 234 158 85 chr20 4704209 4704670 -67449212 - MLT1J LTR MaLR -5 506 12 883 278 60 3 chr20 4704674 4704958 -67448924 - L1MC4a LINE L1 -2152 5656 5357 421 217 101 22 chr20 4705178 4705316 -67448566 - MIR SINE MIR -96 166 18 200 33 0 33 chr20 4705360 4705390 -67448492 + (TTTTA)n Simple_repeat Simple_repeat 4 32 0 45404 35 3 2 chr20 4705390 4711521 -67442361 - L1PA3 LINE L1 -16 6139 1 289 250 57 34 chr20 4711537 4711625 -67442257 - MIR3 SINE MIR -23 185 96 254 188 21 0 chr20 4712201 4712249 -67441633 + MLT1L LTR MaLR 120 168 -447 2400 64 0 0 chr20 4712394 4712691 -67441191 - AluY SINE Alu -14 297 1 347 239 185 8 chr20 4712947 4713077 -67440805 + MLT1L LTR MaLR 446 598 -17 711 300 65 43 chr20 4713149 4713689 -67440193 - L1MC4a LINE L1 -1940 5868 5317 372 345 45 61 chr20 4713720 4713850 -67440032 - L1MC4a LINE L1 -860 5286 5155 15558 32 0 1 chr20 4713850 4716433 -67437449 - L1PA4 LINE L1 -6 6149 3565 372 345 45 61 chr20 4716433 4716661 -67437221 - L1MC4a LINE L1 -991 5155 4934 2287 239 49 42 chr20 4717395 4717768 -67436114 + L1ME3 LINE L1 5466 5835 -327 2275 154 26 8 chr20 4717768 4718151 -67435731 + MLT1B LTR MaLR 1 390 0 2287 239 49 42 chr20 4718151 4718200 -67435682 + L1ME3 LINE L1 5835 5882 -280 1854 122 0 0 chr20 4718200 4718488 -67435394 + AluSx SINE Alu 27 314 0 2287 239 49 42 chr20 4718488 4718752 -67435130 + L1ME3 LINE L1 5882 6159 -3 360 294 27 55 chr20 4719615 4719761 -67434121 - MIR SINE MIR -64 144 3 637 142 67 8 chr20 4719811 4719945 -67433937 + MER96B DNA MER1_type? 80 221 -196 366 374 138 16 chr20 4720799 4721045 -67432837 - L2 LINE L2 -2 3270 2995 318 98 0 0 chr20 4721067 4721118 -67432764 + (ATG)n Simple_repeat Simple_repeat 3 53 0 229 136 182 30 chr20 4722989 4723055 -67430827 + LTR33A LTR ERVL 7 82 -441 461 303 161 8 chr20 4723094 4723348 -67430534 + LTR16C LTR ERVL 169 461 -30 392 245 19 19 chr20 4723538 4723644 -67430238 - MIR3 SINE MIR -6 202 97 210 337 23 0 chr20 4724009 4724095 -67429787 - L2 LINE L2 -220 3052 2965 424 304 88 0 chr20 4724168 4724349 -67429533 + MIR SINE MIR 2 198 -64 1194 281 98 7 chr20 4724604 4725052 -67428830 - LTR16C LTR ERVL -2 489 1 909 256 86 6 chr20 4725632 4725956 -67427926 - LTR16C LTR ERVL -52 439 90 205 204 41 0 chr20 4726082 4726131 -67427751 + L2 LINE L2 2716 2766 -548 333 296 107 15 chr20 4726745 4726941 -67426941 + LTR16C LTR ERVL 1 214 -277 552 228 28 61 chr20 4726985 4727165 -67426717 + LTR16C LTR ERVL 306 479 -12 628 266 88 57 chr20 4728388 4728685 -67425197 + MLT1K LTR MaLR 103 408 -180 306 194 0 0 chr20 4728712 4728774 -67425108 + GA-rich Low_complexity Low_complexity 2 63 0 463 333 145 0 chr20 4728875 4729103 -67424779 + LTR16C LTR ERVL 3 263 -228 609 205 8 0 chr20 4729156 4729273 -67424609 + LTR16C LTR ERVL 370 487 -4 2316 145 19 128 chr20 4729463 4729940 -67423942 - MSTA LTR MaLR -1 425 1 1269 283 82 50 chr20 4730442 4730857 -67423025 + L2 LINE L2 2449 2849 -464 1939 166 0 7 chr20 4730857 4731159 -67422723 - AluSx SINE Alu -12 300 1 1269 283 82 50 chr20 4731159 4731575 -67422307 + L2 LINE L2 2849 3313 0 21 0 0 0 chr20 4731641 4731662 -67422220 + AT_rich Low_complexity Low_complexity 1 21 0 4104 108 0 0 chr20 4731966 4732520 -67421362 - MER41A LTR ERV1 0 554 1 303 253 20 20 chr20 4733069 4733168 -67420714 - MIR SINE MIR -8 254 156 5469 152 46 20 chr20 4733202 4733505 -67420377 - L1MDb LINE L1 -3890 2516 2222 4148 100 32 0 chr20 4733505 4734067 -67419815 + LTR19B LTR ERV1 1 580 0 5469 152 46 20 chr20 4734067 4734931 -67418951 - L1MDb LINE L1 -4184 2222 1316 218 288 43 0 chr20 4734934 4735022 -67418860 + MIR SINE MIR 97 151 -57 2064 104 24 7 chr20 4735593 4735881 -67418001 - AluSc SINE Alu -16 293 1 547 174 174 19 chr20 4736650 4736811 -67417071 - MER5A DNA MER1_type 0 189 4 2582 78 0 0 chr20 4737007 4737316 -67416566 + AluY SINE Alu 3 311 0 243 279 39 34 chr20 4737503 4737684 -67416198 + L1ME4a LINE L1 4880 5060 -1086 21 36 0 0 chr20 4737730 4737758 -67416124 + AT_rich Low_complexity Low_complexity 1 28 0 230 139 0 0 chr20 4737853 4737889 -67415993 + L1MC3 LINE L1 6079 6114 -1671 2231 184 59 36 chr20 4738250 4738313 -67415569 + MLT1D LTR MaLR 1 61 -444 1872 160 39 64 chr20 4738313 4738719 -67415163 - MSTD LTR MaLR 0 396 1 2231 184 59 36 chr20 4738719 4739149 -67414733 + MLT1D LTR MaLR 61 505 0 592 291 73 36 chr20 4739156 4739569 -67414313 + L1ME4a LINE L1 5513 5940 -181 302 342 91 17 chr20 4740317 4740548 -67413334 + MLT1K LTR MaLR 170 417 -171 803 178 127 35 chr20 4740932 4741129 -67412753 - MLT1I LTR MaLR 0 409 195 788 196 18 48 chr20 4741184 4741249 -67412633 + MER45A DNA AcHobo 1 66 -1515 2626 53 0 0 chr20 4741249 4741551 -67412331 - AluY SINE Alu -9 302 1 788 196 18 48 chr20 4741551 4741653 -67412229 + MER45A DNA AcHobo 66 163 -15 1957 157 13 10 chr20 4741763 4742069 -67411813 - AluJb SINE Alu 0 312 6 502 291 6 28 chr20 4742071 4742253 -67411629 - MLT1I LTR MaLR -231 178 1 1015 245 155 31 chr20 4743436 4743824 -67410058 + LTR16A1 LTR ERVL 6 441 -16 187 231 0 0 chr20 4744985 4745024 -67408858 + L2 LINE L2 3201 3239 -33 240 324 171 9 chr20 4745629 4745740 -67408142 - MIR SINE MIR -64 144 16 881 201 140 13 chr20 4745895 4746124 -67407758 + LOR1a LTR ERV1 240 497 0 1672 241 48 31 chr20 4746399 4746877 -67407005 + LTR16C LTR ERVL 6 491 0 181 216 27 0 chr20 4748120 4748157 -67405725 - MIR SINE MIR -117 145 108 1192 253 88 62 chr20 4748266 4748800 -67405082 - MLT1H LTR MaLR 0 549 2 200 273 18 0 chr20 4749649 4749704 -67404178 - MER5C DNA MER1_type -268 56 1 657 267 138 57 chr20 4749739 4750057 -67403825 + MER115 DNA AcHobo 119 462 -231 182 242 15 0 chr20 4750775 4750841 -67403041 + (CA)n Simple_repeat Simple_repeat 2 68 0 2291 145 89 2 chr20 4751923 4752220 -67401662 - MSTC LTR MaLR 0 428 87 2591 59 0 3 chr20 4752220 4752526 -67401356 - AluY SINE Alu -6 305 1 2291 145 89 2 chr20 4752526 4752622 -67401260 - MSTC LTR MaLR -341 87 1 1359 261 77 3 chr20 4754560 4754936 -67398946 - LTR16C LTR ERVL -3 488 85 2274 93 31 3 chr20 4755755 4756045 -67397837 + AluSx SINE Alu 1 298 -14 319 113 141 14 chr20 4756162 4756233 -67397649 + L1MB3 LINE L1 6103 6182 -1 190 188 0 31 chr20 4757407 4757471 -67396411 + CT-rich Low_complexity Low_complexity 3 64 0 312 299 189 0 chr20 4757850 4757977 -67395905 - MER5A DNA MER1_type 0 189 39 529 227 93 7 chr20 4758028 4758178 -67395704 - MER5B DNA MER1_type -15 163 1 280 200 15 0 chr20 4758632 4758697 -67395185 + MER116 DNA Mariner 1 66 -14 308 267 12 23 chr20 4759132 4759218 -67394664 - L2 LINE L2 0 3272 3188 656 212 190 0 chr20 4759278 4759457 -67394425 - LTR16A LTR ERVL 0 450 238 1250 212 60 50 chr20 4759506 4759903 -67393979 - Charlie4a DNA MER1_type -85 423 23 2492 60 16 0 chr20 4760163 4760478 -67393404 - L1PA7 LINE L1 0 6154 5835 758 73 73 0 chr20 4760478 4760588 -67393294 + L1PA7 LINE L1 5728 5845 -327 300 289 87 47 chr20 4761038 4761187 -67392695 + MLT1I LTR MaLR 60 214 -195 275 226 10 126 chr20 4761265 4761392 -67392490 + MLT1I LTR MaLR 290 533 -16 288 280 112 9 chr20 4761683 4761790 -67392092 - L2 LINE L2 -8 3305 3188 930 269 143 36 chr20 4762435 4762646 -67391236 - MLT1J LTR MaLR -36 475 288 1883 148 58 0 chr20 4762646 4762937 -67390945 + AluJb SINE Alu 1 308 -4 930 269 143 36 chr20 4762937 4763133 -67390749 - MLT1J LTR MaLR -223 288 23 463 283 118 48 chr20 4763133 4763448 -67390434 - MLT1I LTR MaLR 0 409 73 220 353 88 20 chr20 4764804 4764906 -67388976 - L2 LINE L2 -9 3263 3155 29 60 0 0 chr20 4764964 4765014 -67388868 + AT_rich Low_complexity Low_complexity 1 50 0 2335 113 0 0 chr20 4765269 4765580 -67388302 - AluSq SINE Alu -2 311 1 21 0 0 0 chr20 4765641 4765662 -67388220 + AT_rich Low_complexity Low_complexity 1 21 0 4460 170 12 35 chr20 4766273 4767151 -67386731 - L1MB8 LINE L1 -11 6447 5590 1093 231 30 36 chr20 4767152 4767489 -67386393 - L1MB8 LINE L1 -962 5464 5130 4284 189 44 43 chr20 4767497 4768365 -67385517 - L1MB8 LINE L1 -2797 3629 2763 2301 92 7 0 chr20 4768365 4768657 -67385225 - AluY SINE Alu -17 294 1 4284 189 44 43 chr20 4768657 4769154 -67384728 - L1MB8 LINE L1 -3663 2763 2268 1065 110 64 0 chr20 4769154 4769327 -67384555 + L1PB1 LINE L1 5968 6151 0 4284 189 44 43 chr20 4769327 4769815 -67384067 - L1MB8 LINE L1 -4158 2268 1770 2151 141 0 0 chr20 4769815 4770112 -67383770 - AluSx SINE Alu -15 297 1 4284 189 44 43 chr20 4770112 4770178 -67383704 - L1MB8 LINE L1 -4656 1770 1706 6830 166 56 44 chr20 4770226 4771693 -67382189 - L1MCa LINE L1 -4935 1491 7 2501 235 60 16 chr20 4771679 4771754 -67382128 - L1M4 LINE L1 -1816 5141 5071 * 438 36 0 0 chr20 4771754 4771810 -67382072 + (TG)n Simple_repeat Simple_repeat 2 57 0 2501 235 60 16 chr20 4771810 4772435 -67381447 - L1M4 LINE L1 -1886 5071 4410 1282 179 20 32 chr20 4772450 4772701 -67381181 - AluJo SINE Alu -11 301 54 2112 242 47 22 chr20 4772723 4773534 -67380348 - L1M4 LINE L1 -2566 4391 3561 2415 77 0 10 chr20 4773541 4773838 -67380044 - AluY SINE Alu -17 294 1 2743 215 26 72 chr20 4773842 4774559 -67379323 - L1M4 LINE L1 -4659 2300 1659 2226 107 7 0 chr20 4774559 4774848 -67379034 + AluSc SINE Alu 1 291 -18 2743 215 26 72 chr20 4774848 4775284 -67378598 - L1M4 LINE L1 -5300 1659 1205 2042 288 32 25 chr20 4775827 4776668 -67377214 - L1M4 LINE L1 -5914 945 29 1051 287 158 25 chr20 4776741 4777006 -67376876 + L2 LINE L2 2460 2688 -625 2209 151 100 5 chr20 4777006 4777397 -67376485 + MSTA LTR MaLR 1 428 0 1051 287 158 25 chr20 4777397 4777899 -67375983 + L2 LINE L2 2688 3313 0 458 219 185 14 chr20 4778888 4779034 -67374848 + MER5A DNA MER1_type 18 188 -1 493 221 106 0 chr20 4779042 4779155 -67374727 + MER58A DNA MER1_type 1 125 0 2234 158 49 30 chr20 4779155 4779677 -67374205 + MLT2A2 LTR ERVL 1 554 0 649 158 0 0 chr20 4779677 4779770 -67374112 + MER58A DNA MER1_type 121 213 -11 228 237 34 17 chr20 4780095 4780154 -67373728 + L2 LINE L2 3205 3264 -8 329 241 85 42 chr20 4780269 4780404 -67373478 - MIR SINE MIR -63 145 19 346 332 71 33 chr20 4781017 4781354 -67372528 + LTR16C LTR ERVL 121 470 -21 396 239 50 111 chr20 4781367 4781727 -67372155 - L1M4 LINE L1 -1907 4239 3902 2225 123 123 3 chr20 4781756 4782137 -67371745 - MSTA LTR MaLR 0 428 2 324 319 51 37 chr20 4782291 4782507 -67371375 - MLT1H LTR MaLR -300 249 31 299 226 52 43 chr20 4782537 4782652 -67371230 - L1M4 LINE L1 -2234 3912 3797 1945 179 40 37 chr20 4782997 4783543 -67370339 + MLT2A2 LTR ERVL 3 554 0 2477 161 38 5 chr20 4783549 4783971 -67369911 + MLT1C LTR MaLR 29 464 -3 217 306 14 0 chr20 4784380 4784452 -67369430 - MIR SINE MIR -109 153 81 2022 159 34 41 chr20 4784484 4784805 -67369077 - L1PB4 LINE L1 -7 6149 5830 1670 173 38 14 chr20 4784805 4785094 -67368788 - AluJb SINE Alu -16 296 1 2022 159 34 41 chr20 4785094 4785186 -67368696 - L1PB4 LINE L1 -326 5830 5739 458 272 89 19 chr20 4785224 4785382 -67368500 + MER117 DNA MER1_type 1 169 -28 271 276 100 119 chr20 4785997 4786131 -67367751 - L2 LINE L2 0 3272 3137 2428 67 0 0 chr20 4786131 4786428 -67367454 - AluY SINE Alu -14 297 1 271 276 100 119 chr20 4786428 4786604 -67367278 - L2 LINE L2 -135 3137 2968 316 260 156 21 chr20 4787193 4787289 -67366593 - L2 LINE L2 -1 3271 3163 1370 238 125 14 chr20 4787746 4788170 -67365712 + MLT1H LTR MaLR 43 513 -36 2020 127 13 22 chr20 4788170 4788485 -67365397 - L1MC1 LINE L1 -1 6332 6021 484 284 71 31 chr20 4789702 4789927 -67363955 + MLT1K LTR MaLR 332 565 -23 267 233 0 44 chr20 4791017 4791107 -67362775 - LTR67 LTR ERVL -4 553 468 1631 301 60 2 chr20 4791107 4791645 -67362237 - MLT2E LTR ERVL 0 628 60 2290 112 3 0 chr20 4792093 4792388 -67361494 - AluSx SINE Alu -16 296 1 260 309 253 19 chr20 4792388 4792653 -67361229 + L3 LINE CR1 733 1059 -518 285 323 16 55 chr20 4793044 4793171 -67360711 + L3 LINE CR1 1397 1518 -59 620 227 116 17 chr20 4793943 4794115 -67359767 + MER5A DNA MER1_type 1 189 0 755 165 23 78 chr20 4794292 4794496 -67359386 + MER39B LTR ERV1 6 246 -461 1834 138 3 46 chr20 4794525 4794850 -67359032 + L1MA7 LINE L1 5398 5708 -583 3375 123 32 28 chr20 4794989 4795556 -67358326 + L1MA7 LINE L1 5720 6288 -3 3083 145 18 16 chr20 4795590 4796087 -67357795 + MER39 LTR ERV1 210 707 0 2211 116 0 3 chr20 4796624 4796926 -67356956 + AluSg SINE Alu 1 301 -9 1414 128 14 28 chr20 4798141 4798359 -67355523 - AluJo SINE Alu -95 217 3 2267 105 0 0 chr20 4798423 4798717 -67355165 - AluSg SINE Alu -14 296 3 1866 98 91 14 chr20 4799130 4799406 -67354476 + AluSx SINE Alu 1 297 -15 821 176 48 53 chr20 4799816 4800004 -67353878 - MER5A DNA MER1_type -2 187 1 849 168 0 142 chr20 4800326 4800457 -67353425 - AluJb SINE Alu -10 302 205 630 60 0 0 chr20 4800457 4800540 -67353342 - L1PB1 LINE L1 0 6151 6069 849 168 0 142 chr20 4800540 4800598 -67353284 - AluJb SINE Alu -107 205 140 1518 246 64 16 chr20 4800617 4801052 -67352830 - MLT1C LTR MaLR -1 466 11 469 204 78 131 chr20 4801196 4801387 -67352495 + MER5A DNA MER1_type 9 189 0 521 306 99 55 chr20 4801391 4802270 -67351612 - L1M4 LINE L1 -1243 4903 3982 388 266 63 67 chr20 4802295 4802802 -67351080 - L1MDa LINE L1 -961 1940 1296 875 180 17 45 chr20 4802934 4803112 -67350770 - MER5B DNA MER1_type -4 174 2 909 287 103 25 chr20 4803829 4804734 -67349148 + L1ME3 LINE L1 4931 5906 -256 2155 186 46 5 chr20 4804770 4805321 -67348561 + L1MC/D LINE L1 5156 5770 -472 311 217 0 29 chr20 4805321 4805390 -67348492 + LTR16C LTR ERVL 425 491 0 258 265 9 104 chr20 4805495 4805725 -67348157 + HAL1 LINE L1 953 1160 -1347 453 325 50 54 chr20 4805833 4806337 -67347545 - L1M4c LINE L1 -3235 3191 2690 4880 229 125 29 chr20 4806384 4807330 -67346552 + L1MD1 LINE L1 16 1155 -5385 2147 94 3 24 chr20 4807330 4807650 -67346232 + AluSq SINE Alu 2 315 0 4880 229 125 29 chr20 4807650 4808162 -67345720 + L1MD1 LINE L1 1155 1617 -4923 10768 25 0 0 chr20 4808172 4810131 -67343751 - L1PA2 LINE L1 0 6155 4196 11030 167 26 69 chr20 4810133 4812987 -67340895 + L1MD1 LINE L1 3338 6013 -623 2473 80 0 0 chr20 4812987 4813298 -67340584 + AluY SINE Alu 1 311 0 11030 167 26 69 chr20 4813298 4813881 -67340001 + L1MD1 LINE L1 6013 6619 -17 302 298 112 22 chr20 4813909 4814087 -67339795 - L1M4c LINE L1 -3959 2467 2274 443 277 162 16 chr20 4814447 4814677 -67339205 - L1M4c LINE L1 -839 1948 1481 406 145 0 0 chr20 4814781 4814843 -67339039 + L1MD2 LINE L1 6068 6129 -230 532 209 86 94 chr20 4814847 4815081 -67338801 + L2 LINE L2 3077 3308 -5 331 257 51 91 chr20 4815152 4815267 -67338615 + HAL1 LINE L1 992 1110 -1397 8067 65 31 2 chr20 4815267 4816246 -67337636 - LTR13 LTR ERVK 0 1007 1 331 257 51 91 chr20 4816246 4816383 -67337499 + HAL1 LINE L1 1110 1234 -1273 290 259 82 13 chr20 4816369 4816527 -67337355 - L1M4 LINE L1 -3126 3020 2852 * 4647 138 72 35 chr20 4817162 4817612 -67336270 - L1MA7 LINE L1 -6 6285 5853 2442 76 0 3 chr20 4817612 4817915 -67335967 - AluY SINE Alu -9 302 1 4647 138 72 35 chr20 4817915 4818356 -67335526 - L1MA7 LINE L1 -438 5853 5361 * 9107 154 43 7 chr20 4818354 4819945 -67333937 + L1 LINE L1 3656 5311 -835 207 0 0 0 chr20 4819945 4819968 -67333914 + (CAA)n Simple_repeat Simple_repeat 2 24 0 9107 154 43 7 chr20 4819968 4820030 -67333852 + L1 LINE L1 5311 5369 -777 342 0 0 0 chr20 4820202 4820240 -67333642 + (TG)n Simple_repeat Simple_repeat 2 39 0 1649 175 51 7 chr20 4820693 4820985 -67332897 - AluJb SINE Alu -7 305 1 317 356 47 13 chr20 4821191 4821340 -67332542 + L1ME LINE L1 4673 4826 -1320 459 237 0 17 chr20 4821816 4821934 -67331948 + L1ME LINE L1 5567 5682 -439 261 163 0 0 chr20 4821956 4822005 -67331877 + (CA)n Simple_repeat Simple_repeat 2 50 0 1327 154 0 5 chr20 4822115 4822316 -67331566 + MER20 DNA MER1_type 20 219 0 222 267 0 0 chr20 4822614 4822674 -67331208 - MIR SINE MIR 0 262 203 264 228 176 29 chr20 4822784 4822920 -67330962 - L1ME4a LINE L1 -96 6025 5870 197 183 17 0 chr20 4823029 4823089 -67330793 + GA-rich Low_complexity Low_complexity 2 62 0 350 230 137 36 chr20 4823094 4823233 -67330649 + L1MC5 LINE L1 6957 7109 -852 181 229 0 42 chr20 4823269 4823317 -67330565 + L2 LINE L2 3227 3272 0 351 260 48 10 chr20 4824101 4824205 -67329677 - MIR3 SINE MIR -54 154 47 396 224 70 29 chr20 4824857 4825007 -67328875 + MIR SINE MIR 16 182 -62 26 0 0 0 chr20 4825915 4825941 -67327941 + AT_rich Low_complexity Low_complexity 1 26 0 247 325 103 0 chr20 4825989 4826106 -67327776 + MLT1J2 LTR MaLR 34 162 -288 333 265 12 12 chr20 4826137 4826220 -67327662 + MLT1I LTR MaLR 196 278 -131 243 339 42 0 chr20 4826347 4826465 -67327417 - MIR3 SINE MIR -53 155 33 245 311 56 0 chr20 4827249 4827339 -67326543 - L2 LINE L2 -18 3295 3201 1074 184 44 73 chr20 4827523 4827937 -67325945 - MLT1A1 LTR MaLR 0 396 1 293 361 28 7 chr20 4828053 4828197 -67325685 - L2 LINE L2 -507 2807 2661 454 328 31 0 chr20 4828634 4828762 -67325120 + MER91C DNA MER1_type 9 140 0 280 175 0 289 chr20 4828796 4828962 -67324920 + MER5B DNA MER1_type 59 176 -2 297 348 170 8 chr20 4828975 4829357 -67324525 + L2 LINE L2 1135 1578 -1736 591 235 184 26 chr20 4829444 4829678 -67324204 - MLT1H1 LTR MaLR 0 555 285 532 286 83 18 chr20 4829773 4829990 -67323892 - MLT1H1 LTR MaLR -244 305 75 1604 188 16 12 chr20 4830745 4831065 -67322817 + MER74C LTR ERVL 155 460 0 1117 303 85 16 chr20 4831899 4832344 -67321538 + LTR16C LTR ERVL 1 476 -15 2064 144 0 0 chr20 4832549 4832847 -67321035 - AluSx SINE Alu -14 298 1 231 114 0 0 chr20 4833377 4833412 -67320470 + (TG)n Simple_repeat Simple_repeat 2 36 0 1261 261 93 3 chr20 4833493 4833880 -67320002 - MLT2E LTR ERVL -206 422 1 307 363 109 11 chr20 4835082 4835459 -67318423 + L1ME4a LINE L1 5531 5944 -226 228 304 0 0 chr20 4835799 4835868 -67318014 + L2 LINE L2 1869 1937 -1377 1656 206 165 15 chr20 4835906 4836386 -67317496 - L1ME1 LINE L1 -34 6132 5581 2276 237 13 27 chr20 4836548 4837097 -67316785 + MER87 LTR ERV1 1 541 0 1887 199 36 117 chr20 4837401 4837789 -67316093 - MLT1E2 LTR MaLR 0 626 208 2846 62 84 77 chr20 4837789 4838243 -67315639 + L1PA7 LINE L1 5698 6154 0 1887 199 36 117 chr20 4838243 4838429 -67315453 - MLT1E2 LTR MaLR -418 208 103 962 236 56 87 chr20 4838429 4838612 -67315270 + MLT1C LTR MaLR 1 188 -279 2316 66 3 17 chr20 4838612 4838900 -67314982 + AluSp SINE Alu 30 313 0 962 236 56 87 chr20 4838900 4839198 -67314684 + MLT1C LTR MaLR 188 467 0 1887 199 36 117 chr20 4839198 4839240 -67314642 - MLT1E2 LTR MaLR -523 103 59 236 258 30 0 chr20 4839282 4839348 -67314534 - MLT1E2 LTR MaLR -434 71 4 419 281 98 38 chr20 4839351 4839586 -67314296 + L2 LINE L2 2478 2726 -588 597 300 34 39 chr20 4839586 4840015 -67313867 - MLT1J LTR MaLR 0 511 71 10539 74 21 0 chr20 4840138 4842294 -67311588 - L1PA7 LINE L1 -8 6146 3960 2201 125 10 3 chr20 4842296 4842601 -67311281 - AluSx SINE Alu -5 307 1 2000 105 3 46 chr20 4842712 4843018 -67310864 - AluSc SINE Alu -16 293 1 260 319 57 110 chr20 4843516 4843833 -67310049 + L2 LINE L2 2956 3255 -17 420 261 49 33 chr20 4843952 4844136 -67309746 + L1ME4a LINE L1 5931 6117 -4 297 75 0 0 chr20 4844176 4844216 -67309666 + (TG)n Simple_repeat Simple_repeat 1 40 0 868 200 65 28 chr20 4845034 4845249 -67308633 - MIR SINE MIR 0 262 40 567 224 133 7 chr20 4845624 4845767 -67308115 - MER5A DNA MER1_type -15 174 14 311 215 0 15 chr20 4846205 4846270 -67307612 + L2 LINE L2 3242 3305 -8 1941 146 73 6 chr20 4846391 4846734 -67307148 - L1MB5 LINE L1 -18 6156 5791 259 241 102 37 chr20 4846824 4846932 -67306950 + MER117 DNA MER1_type 81 195 -2 2461 199 0 0 chr20 4847507 4847925 -67305957 - MER47B DNA MER2_type 0 418 1 1934 151 13 10 chr20 4848945 4849080 -67304802 + AluSx SINE Alu 1 134 -178 2287 92 0 7 chr20 4849080 4849373 -67304509 + AluY SINE Alu 1 291 -20 1934 151 13 10 chr20 4849373 4849548 -67304334 + AluSx SINE Alu 134 312 0 238 309 89 16 chr20 4849957 4850080 -67303802 + MIR3 SINE MIR 12 143 -65 1260 254 40 27 chr20 4850184 4850266 -67303616 + L1MC4a LINE L1 4623 4702 -1444 1719 159 26 26 chr20 4850266 4850568 -67303314 + AluJb SINE Alu 1 302 -10 1260 254 40 27 chr20 4850568 4850841 -67303041 + L1MC4a LINE L1 4702 4986 -1160 2322 208 18 18 chr20 4850841 4851346 -67302536 + L1PA16 LINE L1 5657 6161 -5 1260 254 40 27 chr20 4851346 4851390 -67302492 + L1MC4a LINE L1 4986 5028 -1118 2342 95 7 0 chr20 4851634 4851940 -67301942 + AluSp SINE Alu 1 308 -5 2359 113 0 0 chr20 4852358 4852668 -67301214 - AluSx SINE Alu -2 310 1 234 205 145 24 chr20 4852673 4852756 -67301126 + MIR SINE MIR 61 153 -55 1760 130 23 0 chr20 4853987 4854249 -67299633 - AluSx SINE Alu -13 299 32 2379 106 3 3 chr20 4854749 4855061 -67298821 + AluSq SINE Alu 1 312 -1 184 250 0 0 chr20 4855153 4855197 -67298685 + MIR SINE MIR 61 104 -104 435 320 74 25 chr20 4855528 4855772 -67298110 + L1MC4a LINE L1 5391 5646 -2162 290 235 51 31 chr20 4855827 4855925 -67297957 + L1MC4a LINE L1 5862 5961 -1847 23 0 0 0 chr20 4856075 4856098 -67297784 + AT_rich Low_complexity Low_complexity 1 23 0 345 294 18 29 chr20 4856733 4856903 -67296979 + GA-rich Low_complexity Low_complexity 5 172 0 585 243 28 34 chr20 4858208 4858385 -67295497 + LTR16A1 LTR ERVL 282 457 0 1982 131 14 0 chr20 4858479 4858762 -67295120 - AluSx SINE Alu -25 287 1 198 254 18 0 chr20 4859326 4859381 -67294501 - L2 LINE L2 -1 3271 3216 314 318 170 35 chr20 4860234 4860727 -67293155 - L2 LINE L2 -782 2532 1942 1362 178 100 92 chr20 4860727 4861097 -67292785 + MLT1A2 LTR MaLR 1 373 -1 314 318 170 35 chr20 4861097 4861203 -67292679 - L2 LINE L2 -1372 1942 1852 1754 161 3 40 chr20 4862612 4862911 -67290971 - AluJo SINE Alu -24 288 1 276 262 159 16 chr20 4863358 4863484 -67290398 + MIR SINE MIR 2 145 -117 3686 147 2 2 chr20 4863558 4864131 -67289751 + L1PA16 LINE L1 5585 6157 -9 2242 122 3 6 chr20 4864133 4864444 -67289438 + AluSx SINE Alu 1 310 -2 1887 182 8 32 chr20 4865278 4865652 -67288230 - MLT1A1 LTR MaLR 0 365 1 207 271 0 0 chr20 4866166 4866214 -67287668 + L2 LINE L2 3217 3264 -8 1148 203 206 30 chr20 4866614 4866949 -67286933 + MSTD LTR MaLR 1 394 -2 296 209 0 0 chr20 4868204 4868271 -67285611 - L1MC1 LINE L1 -4 6329 6263 750 253 65 65 chr20 4868285 4868546 -67285336 - MER77 LTR ERV1 -291 314 54 1691 292 107 20 chr20 4868961 4870234 -67283648 + L1ME4a LINE L1 2877 4260 -1886 279 250 75 66 chr20 4870636 4870773 -67283109 + L1ME4a LINE L1 5858 5999 -122 2189 118 10 0 chr20 4870773 4871070 -67282812 + AluSx SINE Alu 5 304 -8 279 250 75 66 chr20 4871070 4871160 -67282722 + L1ME4a LINE L1 5999 6087 -34 270 224 0 0 chr20 4872449 4872498 -67281384 - MER91 DNA MER1_type -3 137 89 589 256 26 6 chr20 4872987 4873143 -67280739 - MIR SINE MIR 0 262 104 369 178 204 25 chr20 4873192 4873341 -67280541 + MLT1H LTR MaLR 53 310 -239 383 226 151 95 chr20 4873617 4873922 -67279960 - MER90 LTR ERV1 -219 356 35 274 30 0 0 chr20 4874425 4874458 -67279424 + MADE1 DNA Mariner 6 38 -42 251 266 32 21 chr20 4875192 4875286 -67278596 + HAL1b LINE L1 469 563 -785 388 85 34 0 chr20 4875292 4875351 -67278531 - MLT2C1 LTR ERVL 0 520 460 251 158 58 42 chr20 4875352 4875472 -67278410 + (TATAA)n Simple_repeat Simple_repeat 4 125 0 224 137 69 8 chr20 4875518 4875649 -67278233 + (TA)n Simple_repeat Simple_repeat 2 140 0 222 191 0 0 chr20 4875670 4875717 -67278165 + (TATG)n Simple_repeat Simple_repeat 2 48 0 1776 160 66 0 chr20 4875846 4876165 -67277717 - MLT2C1 LTR ERVL -57 340 1 1253 134 0 0 chr20 4876209 4876381 -67277501 + AluSp SINE Alu 134 305 -8 22 0 0 0 chr20 4876751 4876773 -67277109 + AT_rich Low_complexity Low_complexity 1 22 0 909 190 0 22 chr20 4876895 4877074 -67276808 + MER5B DNA MER1_type 4 178 0 214 242 0 16 chr20 4877222 4877284 -67276598 + MER5A DNA MER1_type 9 69 -120 3459 154 43 60 chr20 4877421 4878124 -67275758 + LTR8 LTR ERV1 1 691 0 322 380 68 30 chr20 4878225 4878442 -67275440 + L2 LINE L2 2850 3088 -184 5366 76 18 7 chr20 4878442 4879176 -67274706 + L1PA13 LINE L1 5419 6160 -3 322 380 68 30 chr20 4879176 4879324 -67274558 + L2 LINE L2 3088 3229 -43 1301 254 80 15 chr20 4880296 4880773 -67273109 + HAL1 LINE L1 1705 2212 -295 5382 136 12 16 chr20 4880836 4881682 -67272200 + MER4D LTR ERV1 62 903 0 377 289 122 31 chr20 4881682 4882402 -67271480 - L1M4 LINE L1 -748 5398 4613 267 165 66 11 chr20 4882432 4882523 -67271359 + (TTAAA)n Simple_repeat Simple_repeat 4 99 0 254 291 108 55 chr20 4882584 4882982 -67270900 + L1 LINE L1 2409 2827 -3319 277 296 49 0 chr20 4883027 4883108 -67270774 + MER5A DNA MER1_type 10 94 -95 928 322 61 70 chr20 4883179 4883311 -67270571 + L1 LINE L1 2932 3064 -3082 2319 75 7 0 chr20 4883311 4883637 -67270245 - AluSp SINE Alu 0 328 1 928 322 61 70 chr20 4883637 4884446 -67269436 + L1 LINE L1 3064 3868 -2278 2108 128 67 22 chr20 4884446 4884805 -67269077 + THE1C LTR MaLR 1 375 0 928 322 61 70 chr20 4884805 4884865 -67269017 + L1 LINE L1 3868 3927 -2219 408 334 52 30 chr20 4884905 4885309 -67268573 + L1 LINE L1 4067 4479 -1667 882 283 111 24 chr20 4885392 4885816 -67268066 + MLT1L LTR MaLR 155 615 0 351 269 155 56 chr20 4886142 4886588 -67267294 - L1M4 LINE L1 -2919 3227 2738 1432 286 46 21 chr20 4887338 4887814 -67266068 + LTR16C LTR ERVL 4 491 0 180 364 81 62 chr20 4888322 4888531 -67265351 + L2 LINE L2 3030 3242 -30 1144 240 86 26 chr20 4888952 4889796 -67264086 + L1MEc LINE L1 1951 2896 -3319 272 293 55 67 chr20 4892220 4892488 -67261394 + MIR3 SINE MIR 3 259 -3 228 259 129 24 chr20 4893549 4893634 -67260248 + L2 LINE L2 2885 2978 -294 189 289 0 0 chr20 4893741 4893793 -67260089 - L3b LINE CR1 -3 1580 1529 360 0 0 0 chr20 4893953 4893993 -67259889 + (CA)n Simple_repeat Simple_repeat 2 41 0 1170 151 16 0 chr20 4895120 4895306 -67258576 + AluSg/x SINE Alu 104 292 -20 818 179 68 6 chr20 4895373 4895535 -67258347 - LTR37B LTR ERV1 -289 179 8 506 317 85 55 chr20 4896133 4896590 -67257292 + L2 LINE L2 2817 3287 -26 184 297 0 68 chr20 4896743 4896817 -67257065 + L2 LINE L2 3204 3272 0 193 204 250 0 chr20 4897039 4897127 -67256755 + MIR3 SINE MIR 3 112 -96 5976 60 23 4 chr20 4897325 4898077 -67255805 - MER4E LTR ERV1 0 766 1 1827 147 18 0 chr20 4898161 4898447 -67255435 - AluJo SINE Alu -21 291 1 22 0 0 0 chr20 4898470 4898492 -67255390 + AT_rich Low_complexity Low_complexity 1 22 0 789 72 0 0 chr20 4898492 4898589 -67255293 - L1PA6 LINE L1 -7 6147 6051 5094 174 38 35 chr20 4899342 4900518 -67253364 + L1MA9 LINE L1 5127 6312 0 22 56 0 0 chr20 4900644 4900680 -67253202 + AT_rich Low_complexity Low_complexity 1 36 0 208 250 19 0 chr20 4900890 4900942 -67252940 + (TG)n Simple_repeat Simple_repeat 2 54 0 584 274 150 0 chr20 4901740 4901893 -67251989 - MER5A DNA MER1_type 0 189 14 255 303 68 68 chr20 4902236 4902398 -67251484 + MIR SINE MIR 31 192 -70 280 252 0 103 chr20 4902829 4902936 -67250946 + MER117 DNA MER1_type 2 97 -100 189 188 0 83 chr20 4903238 4903286 -67250596 - L2 LINE L2 -18 3295 3252 417 109 0 0 chr20 4903747 4903811 -67250071 + (T)n Simple_repeat Simple_repeat 1 64 0 240 335 36 85 chr20 4904240 4904712 -67249170 + L2 LINE L2 2817 3265 -7 1699 251 97 40 chr20 4904764 4905446 -67248436 - MER21B LTR ERV1 -130 733 13 729 252 34 101 chr20 4905526 4905970 -67247912 + L1ME4a LINE L1 5491 5904 -217 329 193 165 0 chr20 4905974 4906083 -67247799 + L1ME4a LINE L1 5993 6119 -2 3503 211 62 16 chr20 4906839 4907693 -67246189 + MER97a DNA MER1_type 2 894 0 378 279 93 31 chr20 4907878 4908039 -67245843 + MIR SINE MIR 16 186 -76 390 326 31 0 chr20 4908788 4908917 -67244965 - MER94 DNA DNA -1 133 1 2115 113 3 35 chr20 4909013 4909323 -67244559 + AluSx SINE Alu 1 300 -12 322 304 45 0 chr20 4909946 4910058 -67243824 - MER103 DNA DNA -47 119 3 558 229 16 100 chr20 4911098 4911222 -67242660 - MLT1H LTR MaLR -25 406 273 243 0 0 0 chr20 4911222 4911249 -67242633 + (CTGGGG)n Simple_repeat Simple_repeat 3 29 0 558 229 16 100 chr20 4911249 4911547 -67242335 - MLT1H LTR MaLR -158 273 1 1149 203 0 5 chr20 4913150 4913357 -67240525 + MER3 DNA MER1_type 2 207 -2 1543 231 73 86 chr20 4914660 4915259 -67238623 - MER77 LTR ERV1 -1 604 41 365 314 123 8 chr20 4915264 4915516 -67238366 + L1ME3 LINE L1 4960 5240 -906 236 186 23 0 chr20 4915605 4915648 -67238234 + L1P5 LINE L1 5529 5572 -584 379 316 204 16 chr20 4915718 4916022 -67237860 + L1MC4a LINE L1 5626 5986 -1822 1707 291 53 17 chr20 4916196 4916797 -67237085 + MLT2E LTR ERVL 6 628 0 231 158 50 0 chr20 4916813 4916926 -67236956 + (TA)n Simple_repeat Simple_repeat 2 123 -4 186 71 0 0 chr20 4916926 4916954 -67236928 + (TG)n Simple_repeat Simple_repeat 1 28 0 231 158 50 0 chr20 4916954 4916960 -67236922 + (TA)n Simple_repeat Simple_repeat 123 127 0 39598 81 6 8 chr20 4917428 4923579 -67230303 - L1PA6 LINE L1 -3 6151 11 302 246 220 34 chr20 4923601 4923719 -67230163 - MIR SINE MIR -70 192 53 314 267 75 54 chr20 4923975 4924223 -67229659 - MLT1H LTR MaLR -137 272 19 2202 241 72 16 chr20 4924390 4924946 -67228936 - MLT1G1 LTR MaLR -8 587 1 469 266 83 52 chr20 4925315 4925507 -67228375 - MIR SINE MIR -6 256 59 723 210 14 0 chr20 4925914 4926052 -67227830 + MER5B DNA MER1_type 39 178 0 314 201 93 50 chr20 4926194 4926333 -67227549 + L2 LINE L2 3076 3220 -93 287 297 54 0 chr20 4926335 4926409 -67227473 - MER91C DNA MER1_type -32 108 31 437 283 38 0 chr20 4926415 4926521 -67227361 + L2 LINE L2 3203 3312 -1 336 119 0 0 chr20 4926606 4926665 -67227217 + (CAT)n Simple_repeat Simple_repeat 3 61 0 291 309 12 12 chr20 4926802 4926883 -67226999 + MIR SINE MIR 29 109 -153 325 173 58 10 chr20 4926948 4927046 -67226836 + L1ME3 LINE L1 5367 5478 -764 802 271 123 17 chr20 4927049 4927482 -67226400 - MLT1J2 LTR MaLR 0 450 1 421 338 82 17 chr20 4927483 4927900 -67225982 + L1ME3 LINE L1 5486 5929 -233 201 231 0 0 chr20 4928002 4928041 -67225841 + GA-rich Low_complexity Low_complexity 3 41 0 2897 179 9 38 chr20 4928113 4928693 -67225189 + L1MB4 LINE L1 5618 6180 0 429 253 126 44 chr20 4929719 4929901 -67223981 + MIR SINE MIR 63 259 -3 1965 208 177 31 chr20 4930066 4930682 -67223200 - MER21B LTR ERV1 -124 739 34 197 284 45 15 chr20 4930818 4930885 -67222997 + MIR3 SINE MIR 114 182 -26 2872 198 109 28 chr20 4931051 4931840 -67222042 - L1ME3 LINE L1 0 6162 5310 212 302 0 31 chr20 4931880 4931976 -67221906 - MIR SINE MIR -70 192 100 1653 236 106 6 chr20 4932794 4933341 -67220541 - L1ME3 LINE L1 -93 6069 5468 310 229 51 76 chr20 4933938 4934056 -67219826 + L2 LINE L2 3158 3272 0 296 265 102 65 chr20 4934262 4934507 -67219375 + L2 LINE L2 2288 2541 -773 230 343 0 0 chr20 4934483 4934553 -67219329 - L2 LINE L2 0 3313 3244 * 205 314 0 0 chr20 4935441 4935492 -67218390 + polypyrimidine Low_complexity Low_complexity 1 51 0 467 255 113 14 chr20 4936618 4936759 -67217123 - MIR SINE MIR -103 159 5 283 219 135 0 chr20 4936791 4936887 -67216995 + MIR SINE MIR 146 254 -8 180 182 0 0 chr20 4936928 4936972 -67216910 + GA-rich Low_complexity Low_complexity 3 46 0 1947 148 3 16 chr20 4937821 4938126 -67215756 - AluJb SINE Alu -11 301 1 407 200 200 21 chr20 4938272 4938412 -67215470 - MIR SINE MIR -14 248 84 2475 74 0 0 chr20 4939306 4939605 -67214277 - AluSg SINE Alu -11 299 1 510 230 146 6 chr20 4939605 4939783 -67214099 - Charlie4a DNA MER1_type -8 500 298 752 242 204 4 chr20 4939783 4940052 -67213830 - MER5C DNA MER1_type 0 324 2 899 231 60 40 chr20 4940054 4940352 -67213530 - Charlie4a DNA MER1_type -204 304 1 270 336 92 0 chr20 4940812 4940931 -67212951 - MIR SINE MIR -15 247 118 2580 228 3 17 chr20 4942067 4942770 -67211112 + L1MB5 LINE L1 4068 4760 -1386 3733 175 64 41 chr20 4942795 4944302 -67209580 + MER52A LTR ERV1 1 1755 0 1810 198 18 11 chr20 4944302 4944751 -67209131 + L1MB5 LINE L1 4773 5224 -922 277 40 60 20 chr20 4944751 4944801 -67209081 + T-rich Low_complexity Low_complexity 1 52 0 2569 43 0 0 chr20 4944801 4945126 -67208756 - L1PA4 LINE L1 -24 6131 5807 2970 205 28 2 chr20 4945129 4946027 -67207855 + L1MB5 LINE L1 5219 6166 -8 745 239 72 5 chr20 4946133 4946342 -67207540 - Charlie4 DNA MER1_type -1666 295 73 1060 228 9 9 chr20 4946490 4946714 -67207168 + MER58A DNA MER1_type 1 224 0 25 0 0 0 chr20 4946878 4946903 -67206979 + AT_rich Low_complexity Low_complexity 1 25 0 273 324 30 0 chr20 4946920 4947055 -67206827 + L1MDa LINE L1 34 618 -5912 913 235 71 45 chr20 4947280 4947310 -67206572 - MLT2B3 LTR ERVL -10 544 516 531 0 0 0 chr20 4947310 4947369 -67206513 + (TAGA)n Simple_repeat Simple_repeat 2 60 0 913 235 71 45 chr20 4947369 4947606 -67206276 - MLT2B3 LTR ERVL -38 516 270 546 235 38 0 chr20 4947758 4947890 -67205992 + MLT1A2 LTR MaLR 238 374 0 2543 243 41 28 chr20 4947890 4948691 -67205191 + L1ME1 LINE L1 5338 6149 -17 1779 214 31 31 chr20 4948728 4949182 -67204700 + L1MA9 LINE L1 8 461 -6569 2444 219 5 21 chr20 4949230 4949886 -67203996 + L1MA9 LINE L1 1829 2473 -4564 * 8805 174 57 32 chr20 4949877 4952505 -67201377 + L1MA9 LINE L1 4075 6794 -478 465 66 0 0 chr20 4952505 4952566 -67201316 + (CA)n Simple_repeat Simple_repeat 1 61 0 8805 174 57 32 chr20 4952566 4953043 -67200839 + L1MA9 LINE L1 6794 7258 -14 2007 120 29 0 chr20 4953165 4953474 -67200408 + AluSx SINE Alu 1 317 0 226 366 114 13 chr20 4953609 4953836 -67200046 + L2 LINE L2 2804 3053 -219 3022 92 2 31 chr20 4954372 4954828 -67199054 + L1PA13 LINE L1 5702 6144 -19 277 345 45 0 chr20 4954837 4954947 -67198935 - MIR SINE MIR -57 151 37 193 150 0 50 chr20 4954961 4955021 -67198861 + (TTTC)n Simple_repeat Simple_repeat 3 59 0 257 320 87 0 chr20 4955832 4955935 -67197947 - MIR SINE MIR -32 230 119 2274 190 66 34 chr20 4955966 4956418 -67197464 - L1MB7 LINE L1 -277 5907 5471 1888 181 3 0 chr20 4956418 4956716 -67197166 - AluJo SINE Alu -13 299 1 2274 190 66 34 chr20 4956716 4956842 -67197040 - L1MB7 LINE L1 -713 5471 5351 2157 112 7 0 chr20 4956842 4957137 -67196745 - AluSx SINE Alu -15 297 1 2274 190 66 34 chr20 4957137 4957227 -67196655 - L1MB7 LINE L1 -833 5351 5207 862 196 61 17 chr20 4957224 4957454 -67196428 + L1MB7 LINE L1 5940 6179 -5 * 27 0 0 0 chr20 4957694 4957721 -67196161 + AT_rich Low_complexity Low_complexity 1 27 0 8644 168 19 23 chr20 4957728 4959929 -67193953 + L1MA9 LINE L1 3471 5680 -632 2257 110 0 0 chr20 4959929 4960229 -67193653 + AluSx SINE Alu 1 300 -12 2212 131 0 0 chr20 4960229 4960541 -67193341 + AluSx SINE Alu 1 312 0 8644 168 19 23 chr20 4960541 4960941 -67192941 + L1MA9 LINE L1 5678 6064 -248 264 105 0 0 chr20 4960941 4960979 -67192903 + LTR16C LTR ERVL 454 491 0 250 255 51 31 chr20 4961787 4961885 -67191997 - LTR67 LTR ERVL -47 510 411 1118 288 33 40 chr20 4962410 4962833 -67191049 + LTR16C LTR ERVL 51 470 -21 514 269 35 46 chr20 4963106 4963303 -67190579 - ERVL LTR ERVL -1106 4658 4464 1144 344 44 24 chr20 4963683 4964552 -67189330 - ERVL LTR ERVL -1716 3938 3053 24 53 0 0 chr20 4964720 4964758 -67189124 + AT_rich Low_complexity Low_complexity 1 38 0 447 244 23 54 chr20 4964902 4965123 -67188759 - L1M4 LINE L1 -2593 3553 3340 4312 166 35 14 chr20 4965124 4965292 -67188590 - L1MA10 LINE L1 -2 6332 6169 315 0 0 0 chr20 4965292 4965327 -67188555 + (TG)n Simple_repeat Simple_repeat 1 35 0 4312 166 35 14 chr20 4965327 4966016 -67187866 - L1MA10 LINE L1 -165 6169 5457 6215 211 18 9 chr20 4966016 4967385 -67186497 - L1MA10 LINE L1 -2106 4040 2655 1499 104 45 0 chr20 4967385 4967605 -67186277 + MER30 DNA MER1_type 1 230 0 6215 211 18 9 chr20 4967605 4967702 -67186180 - L1MA10 LINE L1 -3491 2655 2560 1496 221 63 49 chr20 4967709 4967924 -67185958 - MER74A LTR ERVL 0 558 348 420 97 0 0 chr20 4967924 4967986 -67185896 + (TG)n Simple_repeat Simple_repeat 1 62 0 1496 221 63 49 chr20 4967986 4968264 -67185618 - MER74A LTR ERVL -210 348 58 345 198 99 12 chr20 4968280 4968361 -67185521 - MER74A LTR ERVL -470 88 1 265 216 9 54 chr20 4968391 4968502 -67185380 - L1M4 LINE L1 -2846 3300 3195 483 270 69 29 chr20 4968757 4968931 -67184951 + MER5A DNA MER1_type 6 186 -3 624 275 11 11 chr20 4970049 4970227 -67183655 - MIR SINE MIR 0 262 85 1823 231 59 12 chr20 4970227 4970733 -67183149 - MLT1H LTR MaLR 0 549 20 216 0 0 0 chr20 4970736 4970760 -67183122 + (T)n Simple_repeat Simple_repeat 1 24 0 351 366 0 8 chr20 4971719 4971850 -67182032 + MIR3 SINE MIR 64 193 -15 447 218 0 0 chr20 4971850 4971951 -67181931 + CT-rich Low_complexity Low_complexity 1 101 0 1155 81 0 27 chr20 4971951 4972136 -67181746 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1361 159 0 17 chr20 4972185 4972417 -67181465 - AluJb SINE Alu -83 229 2 338 197 26 0 chr20 4972760 4972836 -67181046 + Charlie2 DNA MER1_type 67 144 -2638 21 89 0 0 chr20 4972916 4972972 -67180910 + AT_rich Low_complexity Low_complexity 1 56 0 444 280 188 14 chr20 4972986 4973268 -67180614 + Charlie2 DNA MER1_type 251 581 -2201 359 337 88 0 chr20 4973270 4973451 -67180431 + Charlie2b DNA MER1_type 474 670 -2112 4202 202 53 31 chr20 4973520 4974844 -67179038 + Charlie2a DNA MER1_type 1466 2818 -44 433 291 9 1 chr20 4976262 4976389 -67177493 + MIR SINE MIR 31 157 -69 573 269 164 39 chr20 4977989 4978483 -67175399 + L1MC/D LINE L1 2687 3242 -2904 338 225 11 56 chr20 4978570 4978659 -67175223 + MLT1J LTR MaLR 104 188 -323 262 273 31 37 chr20 4978665 4978826 -67175056 + L1MC/D LINE L1 5327 5486 -2322 632 262 61 0 chr20 4978833 4978997 -67174885 - MIR SINE MIR 0 262 89 472 306 86 4 chr20 4979000 4979232 -67174650 + L1MC/D LINE L1 5487 5737 -2071 5604 206 52 11 chr20 4979352 4981777 -67172105 + L1MC3 LINE L1 4024 5403 -743 339 46 11 218 chr20 4981802 4981863 -67172019 + L1MC3 LINE L1 6882 6922 -863 3803 169 35 3 chr20 4981863 4982579 -67171303 - L1MD1 LINE L1 0 6242 5504 339 46 11 218 chr20 4982579 4982604 -67171278 + L1MC3 LINE L1 6922 6950 -835 379 307 24 0 chr20 4982609 4982736 -67171146 - LTR33 LTR ERVL -391 130 1 1532 259 64 74 chr20 4983165 4983851 -67170031 - MER21B LTR ERV1 -150 713 35 268 270 119 16 chr20 4985300 4985426 -67168456 - L2 LINE L2 0 3272 3134 629 239 103 97 chr20 4985898 4986237 -67167645 - MLT1H LTR MaLR 0 549 209 1500 254 17 0 chr20 4986240 4986595 -67167287 + MLT1E2-int LTR MaLR 246 606 -765 928 233 35 170 chr20 4986828 4987494 -67166388 + MLT1E2-int LTR MaLR 692 1267 -104 690 167 25 0 chr20 4987510 4987630 -67166252 - L1MB1 LINE L1 0 6168 6046 3431 150 43 29 chr20 4987630 4987765 -67166117 + L1MB1 LINE L1 5352 5484 -684 2186 118 0 16 chr20 4987765 4988069 -67165813 + AluSx SINE Alu 1 299 -13 3431 150 43 29 chr20 4988069 4988588 -67165294 + L1MB1 LINE L1 5484 6015 -153 486 236 49 0 chr20 4988593 4988716 -67165166 + MLT1E2-int LTR MaLR 1243 1371 0 2228 210 87 19 chr20 4988798 4989337 -67164545 + MLT1E2 LTR MaLR 51 626 0 717 182 135 0 chr20 4989337 4989485 -67164397 - MLT1H LTR MaLR -341 208 41 2019 165 91 10 chr20 4990688 4991082 -67162800 - MSTB LTR MaLR 0 426 1 1248 117 12 0 chr20 4992005 4992176 -67161706 - AluSg/x SINE Alu -16 296 124 243 237 92 13 chr20 4992232 4992308 -67161574 - MLT1H LTR MaLR -15 580 499 * 584 279 49 102 chr20 4992304 4992607 -67161275 - MLT1H LTR MaLR -195 354 70 2457 177 19 2 chr20 4992607 4993026 -67160856 - MSTB LTR MaLR 0 426 1 584 279 49 102 chr20 4993026 4993066 -67160816 - MLT1H LTR MaLR -479 70 29 276 312 85 38 chr20 4993115 4993434 -67160448 - L2 LINE L2 -251 3062 2719 604 314 108 23 chr20 4993449 4993876 -67160006 - MLT1L LTR MaLR -14 601 139 403 237 69 15 chr20 4993974 4994105 -67159777 - MLT1L LTR MaLR -410 139 2 183 100 0 0 chr20 4994133 4994163 -67159719 + (CA)n Simple_repeat Simple_repeat 2 31 0 1198 283 57 31 chr20 4994257 4994573 -67159309 - MLT1D LTR MaLR 0 505 170 1305 118 62 153 chr20 4994573 4994912 -67158970 - AluYb8 SINE Alu 0 308 1 1198 283 57 31 chr20 4994912 4995083 -67158799 - MLT1D LTR MaLR -335 170 5 199 348 61 17 chr20 4996095 4996210 -67157672 + MIR SINE MIR 34 153 -55 842 243 82 12 chr20 4996219 4996462 -67157420 + Charlie4a DNA MER1_type 4 263 -245 750 150 50 0 chr20 4996470 4996590 -67157292 + FLAM_C SINE Alu 2 127 -16 437 233 61 22 chr20 4996607 4996787 -67157095 + Charlie4a DNA MER1_type 253 439 -69 2294 120 0 0 chr20 4996834 4997143 -67156739 + AluSx SINE Alu 1 309 -3 311 275 44 9 chr20 4997226 4997341 -67156541 - MIR SINE MIR -87 121 2 679 261 124 0 chr20 4997369 4997603 -67156279 + L2 LINE L2 1441 1703 -1611 1674 206 102 80 chr20 4997608 4998077 -67155805 - MLT1F LTR MaLR -2 540 56 2262 119 51 20 chr20 4998077 4998430 -67155452 + THE1B LTR MaLR 1 364 0 1674 206 102 80 chr20 4998430 4998488 -67155394 - MLT1F LTR MaLR -486 56 1 1239 248 65 3 chr20 4998488 4998827 -67155055 + L2 LINE L2 1708 2067 -1247 282 283 91 36 chr20 4998887 4999106 -67154776 + HAL1 LINE L1 2014 2244 -263 416 194 32 0 chr20 4999121 4999214 -67154668 + HAL1 LINE L1 2296 2391 -116 747 277 130 36 chr20 4999736 5000606 -67153276 + L1MEc LINE L1 805 1651 -4564 567 108 0 0 chr20 5001828 5001921 -67151961 + (TTCC)n Simple_repeat Simple_repeat 2 94 0 2097 127 0 10 chr20 5001921 5002221 -67151661 - AluSx SINE Alu -15 297 1 2390 99 0 0 chr20 5002376 5002670 -67151212 + AluY SINE Alu 1 294 -17 286 252 153 0 chr20 5003314 5003445 -67150437 - L2 LINE L2 -2 3311 3161 363 305 163 17 chr20 5003709 5003942 -67149940 + LTR16C LTR ERVL 223 489 -2 585 355 59 20 chr20 5004007 5004060 -67149822 - L2 LINE L2 -199 3073 3024 2284 112 0 0 chr20 5004060 5004365 -67149517 + AluSx SINE Alu 1 305 -7 585 355 59 20 chr20 5004365 5004878 -67149004 - L2 LINE L2 -248 3024 2490 231 218 0 0 chr20 5005153 5005208 -67148674 + (ATG)n Simple_repeat Simple_repeat 2 56 0 2016 93 0 35 chr20 5005318 5005621 -67148261 + L1PA13 LINE L1 5862 6155 -8 2221 116 0 0 chr20 5005621 5005915 -67147967 - AluSx SINE Alu -18 294 1 206 301 19 78 chr20 5005967 5006070 -67147812 - L2 LINE L2 -621 2693 2597 888 267 94 1 chr20 5006076 5006500 -67147382 + LTR16C LTR ERVL 1 491 0 2348 194 67 9 chr20 5006828 5007364 -67146518 - MLT1F1 LTR MaLR 0 567 1 678 190 0 0 chr20 5007448 5007564 -67146318 + FRAM SINE Alu 41 156 -20 416 180 0 11 chr20 5007569 5007658 -67146224 + GA-rich Low_complexity Low_complexity 2 89 0 23 0 0 0 chr20 5008100 5008123 -67145759 + AT_rich Low_complexity Low_complexity 1 23 0 1481 240 63 30 chr20 5009102 5009424 -67144458 + Charlie4a DNA MER1_type 2 347 -1614 2155 116 0 14 chr20 5009424 5009718 -67144164 - AluSx SINE Alu -22 290 1 1481 240 63 30 chr20 5009718 5009886 -67143996 + Charlie4a DNA MER1_type 347 508 0 340 302 98 33 chr20 5010312 5010446 -67143436 - L1ME4a LINE L1 -161 5960 5836 2321 65 27 14 chr20 5010446 5010739 -67143143 + AluY SINE Alu 1 297 -14 340 302 98 33 chr20 5010739 5010849 -67143033 - L1ME4a LINE L1 -285 5836 5700 2296 117 0 0 chr20 5010849 5011147 -67142735 + AluSx SINE Alu 1 298 -14 252 232 87 0 chr20 5011189 5011258 -67142624 - MER116 DNA Mariner 0 80 6 338 310 86 76 chr20 5011275 5011975 -67141907 - L1ME4a LINE L1 -1316 4830 4124 1854 161 22 12 chr20 5012044 5012368 -67141514 + MLT1A1 LTR MaLR 39 365 0 22 35 0 0 chr20 5012577 5012606 -67141276 + AT_rich Low_complexity Low_complexity 1 29 0 305 265 68 0 chr20 5014811 5014928 -67138954 + MIR SINE MIR 100 224 -38 252 290 21 21 chr20 5014997 5015090 -67138792 + LTR16C LTR ERVL 79 171 -320 258 154 0 58 chr20 5015112 5015164 -67138718 - MLT2B1 LTR ERVL -8 512 464 249 246 0 0 chr20 5015166 5015231 -67138651 + (TATG)n Simple_repeat Simple_repeat 4 68 0 1339 206 148 35 chr20 5015237 5015668 -67138214 - MLT2B1 LTR ERVL -40 480 1 265 309 36 0 chr20 5015737 5015847 -67138035 + LTR16C LTR ERVL 349 462 -29 375 271 19 94 chr20 5017268 5017353 -67136529 - L1ME3A LINE L1 -234 5936 5846 2267 92 0 17 chr20 5017353 5017648 -67136234 - AluSx SINE Alu -20 292 3 375 271 19 94 chr20 5017648 5017828 -67136054 - L1ME3A LINE L1 -324 5846 5691 24 0 0 0 chr20 5017977 5018001 -67135881 + AT_rich Low_complexity Low_complexity 1 24 0 292 267 37 84 chr20 5018203 5018394 -67135488 - L1ME4a LINE L1 -3289 2857 2676 5392 119 19 57 chr20 5018400 5019475 -67134407 + L1PA12 LINE L1 5130 6168 0 181 163 41 0 chr20 5019509 5019558 -67134324 + CT-rich Low_complexity Low_complexity 2 52 0 2195 121 16 0 chr20 5019684 5019991 -67133891 - AluSx SINE Alu 0 312 1 370 340 111 17 chr20 5020038 5020335 -67133547 - L1ME4a LINE L1 -3600 2546 2222 5777 63 7 0 chr20 5020569 5021284 -67132598 - L1PA8 LINE L1 -1 6171 5452 267 182 105 127 chr20 5021678 5021859 -67132023 + MER104 DNA Tc2 1 177 -3 535 283 93 20 chr20 5021910 5022304 -67131578 - L1MDa LINE L1 -742 2159 1636 2220 115 7 0 chr20 5022514 5022809 -67131073 - AluSx SINE Alu -15 297 1 1172 188 43 59 chr20 5024398 5024701 -67129181 + AluJo SINE Alu 1 298 -4 276 119 0 0 chr20 5025866 5025908 -67127974 - AluJo SINE Alu -11 291 250 1215 185 4 89 chr20 5025928 5026209 -67127673 - AluJo SINE Alu -53 259 3 256 312 102 62 chr20 5026412 5026863 -67127019 - L1M4 LINE L1 -1003 5143 4712 1176 142 49 0 chr20 5026863 5027068 -67126814 - L1MA7 LINE L1 0 6291 6077 256 312 102 62 chr20 5027068 5027689 -67126193 - L1M4 LINE L1 -1434 4712 4027 824 176 149 5 chr20 5027818 5028006 -67125876 - AluJo SINE Alu -11 301 87 231 321 149 15 chr20 5028101 5028235 -67125647 + MIR SINE MIR 105 256 -6 2225 105 0 0 chr20 5028262 5028591 -67125291 - AluSq SINE Alu 0 329 1 447 104 15 0 chr20 5028633 5028700 -67125182 - MER41A LTR ERV1 -88 466 399 22 70 0 0 chr20 5028796 5028839 -67125043 + AT_rich Low_complexity Low_complexity 1 43 0 1455 101 22 40 chr20 5029217 5029445 -67124437 + AluSx SINE Alu 2 225 -87 689 229 108 54 chr20 5029528 5029825 -67124057 + L2 LINE L2 2995 3307 -6 351 213 0 0 chr20 5030087 5030167 -67123715 + (CA)n Simple_repeat Simple_repeat 1 80 0 637 235 117 5 chr20 5030383 5030596 -67123286 - MER115 DNA AcHobo 0 693 457 754 274 36 15 chr20 5030645 5030919 -67122963 - MER115 DNA AcHobo -322 371 92 699 156 0 0 chr20 5031534 5031643 -67122239 + L1MB5 LINE L1 6065 6173 -1 2234 132 3 0 chr20 5031651 5031961 -67121921 + AluSx SINE Alu 1 311 -1 1133 68 28 6 chr20 5031994 5032170 -67121712 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 211 122 24 0 chr20 5033176 5033217 -67120665 - L2 LINE L2 -556 2758 2717 846 228 53 0 chr20 5033229 5033435 -67120447 + MIR SINE MIR 12 228 -34 225 167 39 26 chr20 5033984 5034062 -67119820 + GA-rich Low_complexity Low_complexity 1 79 0 792 263 24 0 chr20 5034080 5034293 -67119589 + MIR SINE MIR 12 229 -33 2155 77 7 28 chr20 5034599 5034886 -67118996 + AluSx SINE Alu 1 281 -31 450 0 0 0 chr20 5034891 5034941 -67118941 + (TAAA)n Simple_repeat Simple_repeat 2 51 0 271 32 0 0 chr20 5035539 5035570 -67118312 - L1M2 LINE L1 -425 5887 5857 278 149 0 0 chr20 5035571 5035618 -67118264 + L1MA7 LINE L1 6239 6285 -6 180 0 0 0 chr20 5035618 5035638 -67118244 + (CCA)n Simple_repeat Simple_repeat 3 22 0 203 255 0 0 chr20 5036432 5036479 -67117403 + L2 LINE L2 3252 3298 -15 431 192 35 17 chr20 5036880 5036989 -67116893 - MLT1C LTR MaLR -337 130 18 1064 210 70 18 chr20 5037391 5037619 -67116263 - MLT1C LTR MaLR 0 467 228 2934 133 13 49 chr20 5037619 5037937 -67115945 - MER39B LTR ERV1 0 653 360 2781 91 3 5 chr20 5037937 5038310 -67115572 - THE1C LTR MaLR 0 375 4 2934 133 13 49 chr20 5038310 5038524 -67115358 - MER39B LTR ERV1 -293 360 140 1053 166 29 46 chr20 5038562 5038803 -67115079 - MLT1C LTR MaLR -230 237 1 829 254 57 32 chr20 5038925 5039240 -67114642 + L1MDa LINE L1 18 340 -6200 687 233 17 80 chr20 5039368 5039589 -67114293 + L1MDa LINE L1 843 1043 -5500 2085 122 3 25 chr20 5039589 5039909 -67113973 + AluSq SINE Alu 1 313 0 687 233 17 80 chr20 5039909 5039975 -67113907 + L1MDa LINE L1 1043 1112 -5431 1051 151 32 21 chr20 5039976 5040162 -67113720 - MER21B LTR ERV1 -14 849 662 2651 110 75 54 chr20 5040162 5040645 -67113237 - LTR26B LTR ERV1 -1 530 38 33065 103 15 60 chr20 5040662 5044719 -67109163 - L1PA7 LINE L1 0 6154 2498 2549 64 0 10 chr20 5044719 5045030 -67108852 - AluY SINE Alu -3 308 1 33065 103 15 60 chr20 5045030 5047412 -67106470 - L1PA7 LINE L1 -3656 2498 12 477 114 0 14 chr20 5047432 5047502 -67106380 - LTR26E LTR ERV1 -553 69 1 * 2484 216 68 22 chr20 5047502 5048047 -67105835 - MER21B LTR ERV1 -197 666 97 284 198 119 89 chr20 5048157 5048258 -67105624 - MER21B LTR ERV1 -758 105 2 3535 210 94 66 chr20 5048273 5048602 -67105280 + L1MDa LINE L1 1259 1577 -4963 1902 169 0 3 chr20 5048602 5048915 -67104967 + AluJb SINE Alu 1 312 0 3535 210 94 66 chr20 5048915 5048933 -67104949 + L1MDa LINE L1 1577 1593 -4947 2410 97 3 0 chr20 5048933 5049242 -67104640 + AluSx SINE Alu 1 310 -2 3535 210 94 66 chr20 5049242 5050184 -67103698 + L1MDa LINE L1 1593 2586 -3954 1327 127 131 23 chr20 5050172 5050431 -67103451 + L1MA6 LINE L1 6014 6300 0 * 1470 232 36 27 chr20 5050402 5050846 -67103036 + L1MDa LINE L1 2539 2986 -3554 818 164 0 8 chr20 5050853 5050981 -67102901 + FLAM_C SINE Alu 1 127 -16 26 0 0 0 chr20 5051543 5051569 -67102313 + AT_rich Low_complexity Low_complexity 1 26 0 954 163 41 131 chr20 5051576 5051728 -67102154 - L1MA9 LINE L1 -1 6311 6202 303 28 0 0 chr20 5051728 5051764 -67102118 + (TG)n Simple_repeat Simple_repeat 1 36 0 954 163 41 131 chr20 5051764 5051931 -67101951 - L1MA9 LINE L1 -110 6202 6021 1108 134 18 55 chr20 5051931 5051979 -67101903 + L1 LINE L1 5086 5134 -1012 1672 187 14 14 chr20 5051979 5052273 -67101609 + AluJb SINE Alu 1 294 -18 1108 134 18 55 chr20 5052273 5052441 -67101441 + L1 LINE L1 5134 5294 -852 4205 131 43 49 chr20 5052842 5053631 -67100251 + LTR1 LTR ERV1 1 784 -1 235 235 144 15 chr20 5053894 5054026 -67099856 + L1M4 LINE L1 4472 4620 -1526 2151 98 4 0 chr20 5054130 5054405 -67099477 + AluSx SINE Alu 1 276 -36 193 0 61 30 chr20 5054639 5054672 -67099210 + (CAAAA)n Simple_repeat Simple_repeat 5 38 0 729 151 22 22 chr20 5055627 5055766 -67098116 - MER5A DNA MER1_type -23 166 28 429 248 0 9 chr20 5055797 5055906 -67097976 - MER5B DNA MER1_type -23 155 48 2135 112 53 36 chr20 5055927 5056285 -67097597 + THE1B LTR MaLR 1 364 0 3445 128 0 4 chr20 5056928 5057427 -67096455 - LOR1a LTR ERV1 0 497 1 574 271 135 10 chr20 5057463 5057766 -67096116 + L2 LINE L2 2875 3215 -98 1942 154 101 97 chr20 5057806 5058468 -67095414 + MER4A LTR ERV1 1 872 0 368 263 11 0 chr20 5059109 5059204 -67094678 - MER5A DNA MER1_type -84 105 10 2585 64 0 0 chr20 5060243 5060539 -67093343 + AluY SINE Alu 1 296 -15 2326 111 0 3 chr20 5061392 5061698 -67092184 - AluSq SINE Alu -8 305 1 350 286 153 20 chr20 5061901 5062097 -67091785 - HAL1 LINE L1 -5 2502 2281 579 266 47 18 chr20 5062139 5062417 -67091465 - HAL1 LINE L1 -328 2179 1894 243 233 35 95 chr20 5062590 5062706 -67091176 - Charlie8 DNA MER1_type -2217 200 92 2306 110 0 0 chr20 5062864 5063164 -67090718 + AluSx SINE Alu 1 300 -12 1631 238 36 44 chr20 5063792 5063839 -67090043 - LTR16C LTR ERVL -1 490 444 2327 107 0 0 chr20 5063839 5064149 -67089733 + AluSg SINE Alu 1 310 0 1631 238 36 44 chr20 5064149 5064551 -67089331 - LTR16C LTR ERVL -47 444 45 778 175 29 6 chr20 5064693 5064850 -67089032 - MLT1D LTR MaLR -361 144 1 817 160 0 0 chr20 5065963 5066094 -67087788 + FLAM_A SINE Alu 1 131 -2 1869 162 14 0 chr20 5066183 5066512 -67087370 - AluJb SINE Alu 0 333 1 285 206 19 136 chr20 5066753 5066908 -67086974 + L2 LINE L2 2931 3067 -246 429 234 14 0 chr20 5066950 5067054 -67086828 - L1ME2 LINE L1 -3 6163 6053 3912 177 29 4 chr20 5067061 5067762 -67086120 - MER44D DNA MER2_type -3 602 13 376 237 148 15 chr20 5068864 5068999 -67084883 + MIR SINE MIR 36 188 -74 15137 194 47 11 chr20 5069036 5071609 -67082273 + L1PB1 LINE L1 6 2485 -4382 2251 116 0 31 chr20 5071609 5071929 -67081953 + AluSx SINE Alu 1 310 -2 15137 194 47 11 chr20 5071929 5073856 -67080026 + L1PB1 LINE L1 2485 4341 -2526 2159 112 0 3 chr20 5073856 5074141 -67079741 + AluSq SINE Alu 1 284 -29 668 12 0 12 chr20 5074144 5074226 -67079656 + (GAAA)n Simple_repeat Simple_repeat 1 81 0 15137 194 47 11 chr20 5074226 5076136 -67077746 + L1PB1 LINE L1 4342 6814 -53 2394 89 3 0 chr20 5076136 5076440 -67077442 + AluSg SINE Alu 1 305 -5 15137 194 47 11 chr20 5076440 5076475 -67077407 + L1PB1 LINE L1 6814 6846 -21 620 169 8 23 chr20 5076521 5076651 -67077231 - FRAM SINE Alu -6 170 43 524 174 0 11 chr20 5076657 5076749 -67077133 - AluJ/FLAM SINE Alu -218 94 4 225 0 0 0 chr20 5076894 5076919 -67076963 + (A)n Simple_repeat Simple_repeat 1 25 0 285 185 163 33 chr20 5076990 5077082 -67076800 + Charlie7 DNA MER1_type 2509 2612 0 2056 118 4 0 chr20 5077668 5077939 -67075943 + AluSq SINE Alu 3 274 -39 27 0 0 0 chr20 5077939 5077966 -67075916 + AT_rich Low_complexity Low_complexity 1 27 0 815 232 0 0 chr20 5078083 5078247 -67075635 + FRAM SINE Alu 7 170 -6 252 269 0 0 chr20 5078259 5078311 -67075571 - L2 LINE L2 -19 3294 3243 664 228 30 101 chr20 5078452 5078838 -67075044 + MLT1H LTR MaLR 95 467 0 485 302 168 19 chr20 5078880 5079305 -67074577 - L2 LINE L2 -231 3082 2590 461 220 74 60 chr20 5079522 5079709 -67074173 - MIR SINE MIR -3 259 59 242 265 68 26 chr20 5080794 5080911 -67072971 + LTR16C LTR ERVL 182 303 -188 310 221 126 11 chr20 5080941 5081036 -67072846 + LTR16C LTR ERVL 380 485 -6 778 170 0 15 chr20 5081158 5081293 -67072589 + FLAM_C SINE Alu 1 133 0 660 306 51 0 chr20 5081356 5081591 -67072291 - L1ME3 LINE L1 -2 6160 5914 1604 238 72 12 chr20 5081592 5082021 -67071861 - MLT1C LTR MaLR -4 463 9 699 273 61 4 chr20 5082026 5082304 -67071578 - L1ME3 LINE L1 -242 5920 5627 522 0 0 0 chr20 5082779 5082837 -67071045 + (TAAAA)n Simple_repeat Simple_repeat 4 61 0 1900 170 55 18 chr20 5082838 5083221 -67070661 - L1MB7 LINE L1 -33 6151 5754 2395 259 75 22 chr20 5083362 5084095 -67069787 - L1ME3 LINE L1 -30 6132 5361 483 261 80 29 chr20 5084208 5084547 -67069335 - L1ME3 LINE L1 -619 5543 5194 287 179 0 0 chr20 5084550 5084606 -67069276 - Alu SINE Alu -5 297 242 781 172 9 4 chr20 5084606 5084763 -67069119 - L1MB4 LINE L1 -159 6021 5867 1657 180 45 7 chr20 5084765 5085054 -67068828 - AluJb SINE Alu -12 300 1 6763 170 19 11 chr20 5085063 5086403 -67067479 - L1MC3 LINE L1 -1 7784 6335 2220 161 43 21 chr20 5086451 5086874 -67067008 - MSTB1 LTR MaLR 0 432 1 1106 168 0 0 chr20 5087511 5087678 -67066204 + FAM SINE Alu 1 167 -8 1528 132 0 0 chr20 5087711 5087939 -67065943 + AluSg/x SINE Alu 82 309 -1 268 330 191 0 chr20 5088758 5088931 -67064951 - L2 LINE L2 -102 3170 2965 2186 97 7 0 chr20 5089470 5089770 -67064112 + AluSc SINE Alu 1 302 -7 1395 272 28 6 chr20 5090800 5091160 -67062722 + LTR16C LTR ERVL 124 491 0 1882 119 3 11 chr20 5091262 5091602 -67062280 - AluSx SINE Alu 0 338 1 1146 133 6 17 chr20 5091638 5091819 -67062063 - AluJo SINE Alu -43 269 91 1685 189 0 0 chr20 5092761 5093052 -67060830 - AluJo SINE Alu -15 297 7 1800 150 7 7 chr20 5093743 5094036 -67059846 + AluJb SINE Alu 1 293 -19 2129 106 3 6 chr20 5094036 5094347 -67059535 + AluSx SINE Alu 1 310 -2 21 0 0 0 chr20 5094670 5094691 -67059191 + AT_rich Low_complexity Low_complexity 1 21 0 997 212 33 0 chr20 5095038 5095250 -67058632 - MER20 DNA MER1_type 0 219 1 1780 150 11 0 chr20 5095927 5096214 -67057668 - AluJb SINE Alu -17 295 6 215 325 8 32 chr20 5096246 5096369 -67057513 + L2 LINE L2 2636 2755 -559 454 208 31 0 chr20 5096391 5096487 -67057395 + MER5A DNA MER1_type 11 109 -80 265 359 220 13 chr20 5096581 5096963 -67056919 + L2 LINE L2 2810 3270 -2 561 217 77 14 chr20 5097219 5097362 -67056520 - MER63A DNA MER1_type -6 204 53 217 348 43 0 chr20 5097452 5097544 -67056338 + L2 LINE L2 3172 3267 -5 2096 101 7 3 chr20 5098746 5099052 -67054830 + AluSp SINE Alu 7 313 0 497 317 66 49 chr20 5100746 5101112 -67052770 + L1MC4a LINE L1 5534 5905 -1903 2040 121 0 7 chr20 5101263 5101568 -67052314 + AluSx SINE Alu 1 303 -9 1897 128 3 0 chr20 5103217 5103499 -67050383 + AluSq SINE Alu 27 309 -4 694 214 132 6 chr20 5103815 5103997 -67049885 + MIR SINE MIR 21 225 -37 280 195 110 37 chr20 5104008 5104090 -67049792 - L2 LINE L2 -10 3262 3175 207 0 0 0 chr20 5105222 5105245 -67048637 + (TG)n Simple_repeat Simple_repeat 2 24 0 361 260 0 62 chr20 5105263 5105359 -67048523 - L1MC4 LINE L1 -1339 6703 6614 423 38 0 0 chr20 5105359 5105412 -67048470 + (CA)n Simple_repeat Simple_repeat 2 54 0 1730 121 72 8 chr20 5105414 5105679 -67048203 - AluJo SINE Alu -25 287 6 617 284 62 0 chr20 5105960 5106136 -67047746 - MIR SINE MIR -14 248 62 25 0 0 0 chr20 5107899 5107924 -67045958 + GC_rich Low_complexity Low_complexity 1 25 0 232 211 233 11 chr20 5108813 5108903 -67044979 - MIR3 SINE MIR -21 187 78 2205 165 6 3 chr20 5109856 5110220 -67043662 + MLT1A1 LTR MaLR 1 365 0 1859 209 88 33 chr20 5110235 5110302 -67043580 - L1ME3A LINE L1 0 6170 6108 2140 102 0 0 chr20 5110302 5110597 -67043285 - AluY SINE Alu -16 295 1 1859 209 88 33 chr20 5110597 5111075 -67042807 - L1ME3A LINE L1 -62 6108 5595 249 273 52 13 chr20 5111248 5111325 -67042557 + L2 LINE L2 3158 3237 -35 202 197 121 15 chr20 5112256 5112322 -67041560 + MIR3 SINE MIR 3 75 -133 1417 258 129 48 chr20 5112926 5113213 -67040669 - L1ME3A LINE L1 -9 6161 5899 1575 184 7 3 chr20 5113213 5113507 -67040375 - AluJo SINE Alu -17 295 1 1417 258 129 48 chr20 5113507 5113823 -67040059 - L1ME3A LINE L1 -271 5899 5509 972 202 9 37 chr20 5114017 5114235 -67039647 + Charlie4a DNA MER1_type 1 212 -296 347 137 0 0 chr20 5114236 5114287 -67039595 + MER81 DNA DNA 1 51 -63 516 209 27 0 chr20 5114289 5114399 -67039483 + MER81 DNA DNA 2 114 0 696 208 125 17 chr20 5114399 5114639 -67039243 + Charlie4a DNA MER1_type 206 471 -37 2239 97 0 0 chr20 5114659 5114959 -67038923 - AluSx SINE Alu -12 300 1 3155 71 7 0 chr20 5116044 5116455 -67037427 + L1PA8 LINE L1 5759 6172 0 2124 116 3 0 chr20 5117094 5117405 -67036477 + AluSx SINE Alu 1 312 0 1736 218 11 5 chr20 5117415 5117795 -67036087 - L1MB7 LINE L1 -5 6179 5798 1749 164 13 7 chr20 5118108 5118412 -67035470 + AluJb SINE Alu 1 306 -6 2148 155 45 18 chr20 5119612 5119992 -67033890 + MLT1B LTR MaLR 1 390 0 297 0 0 0 chr20 5120131 5120164 -67033718 + (T)n Simple_repeat Simple_repeat 1 33 0 249 183 56 56 chr20 5120401 5120472 -67033410 - MER91C DNA MER1_type -21 119 49 201 348 29 0 chr20 5120621 5120690 -67033192 + MIR SINE MIR 174 244 -18 1683 200 141 50 chr20 5120831 5121292 -67032590 - MLT2B1 LTR ERVL 0 520 18 435 258 49 63 chr20 5121302 5121445 -67032437 - L1ME4a LINE L1 -44 6077 5938 2466 31 0 0 chr20 5121445 5121733 -67032149 - AluY SINE Alu -21 290 3 435 258 49 63 chr20 5121733 5121876 -67032006 - L1ME4a LINE L1 -183 5938 5795 2059 100 0 0 chr20 5121948 5122259 -67031623 - AluSg SINE Alu 0 311 1 696 198 0 0 chr20 5122264 5122390 -67031492 - FRAM SINE Alu -18 158 33 650 290 36 23 chr20 5122920 5123218 -67030664 - MER115 DNA AcHobo -238 455 134 858 182 0 0 chr20 5123630 5123762 -67030120 + FLAM_A SINE Alu 1 132 -1 535 261 155 0 chr20 5124148 5124309 -67029573 + MER5A DNA MER1_type 4 189 0 979 180 22 11 chr20 5124581 5124764 -67029118 + MER5A DNA MER1_type 1 185 -4 2048 105 3 10 chr20 5125531 5125837 -67028045 - AluSq SINE Alu -9 304 1 2680 152 38 2 chr20 5125947 5126395 -67027487 - MER88 LTR ERVL 0 464 1 2329 145 32 54 chr20 5126672 5127045 -67026837 + Tigger2a DNA MER2_type 1 365 -2343 2139 82 7 0 chr20 5127045 5127353 -67026529 + AluSx SINE Alu 1 310 0 2329 145 32 54 chr20 5127353 5127420 -67026462 + Tigger2a DNA MER2_type 365 432 -2 24 32 0 0 chr20 5128066 5128097 -67025785 + AT_rich Low_complexity Low_complexity 1 31 0 585 196 43 43 chr20 5130759 5130922 -67022960 - L1MB8 LINE L1 0 6184 6022 971 275 210 7 chr20 5131415 5132097 -67021785 + L2 LINE L2 2476 3313 0 478 323 75 21 chr20 5132739 5133393 -67020489 + L1M4 LINE L1 4156 4844 -1302 405 313 64 38 chr20 5133474 5133675 -67020207 + L1M4 LINE L1 4942 5136 -1010 3633 104 73 0 chr20 5133675 5134212 -67019670 + L1PA13 LINE L1 5588 6163 0 405 313 64 38 chr20 5134212 5134460 -67019422 + L1M4 LINE L1 5136 5403 -743 221 196 0 0 chr20 5134940 5134986 -67018896 - L2 LINE L2 0 3313 3268 874 158 0 0 chr20 5134999 5135132 -67018750 - FLAM_C SINE Alu 0 133 1 1429 171 77 18 chr20 5135254 5135528 -67018354 - AluJo SINE Alu -14 298 9 282 270 22 45 chr20 5135584 5135673 -67018209 - L2 LINE L2 0 3272 3186 490 332 46 5 chr20 5135677 5135894 -67017988 - L2 LINE L2 -397 2917 2692 854 101 0 0 chr20 5135894 5136003 -67017879 + AluJb SINE Alu 15 123 -189 737 320 125 14 chr20 5136018 5136449 -67017433 - L2 LINE L2 -640 2674 2196 238 289 175 5 chr20 5136520 5136714 -67017168 + L1M4 LINE L1 3719 3945 -2201 311 248 115 31 chr20 5137052 5137278 -67016604 + L1M4 LINE L1 4372 4616 -1530 1247 219 4 4 chr20 5137327 5137583 -67016299 + L1 LINE L1 2581 2836 -3310 * 2822 157 9 0 chr20 5137577 5138037 -67015845 + L1 LINE L1 3640 4103 -2043 3432 143 27 13 chr20 5138038 5138658 -67015224 - L1 LINE L1 -1497 4649 4021 219 255 69 39 chr20 5138907 5139009 -67014873 - MIR SINE MIR -113 149 45 310 343 75 0 chr20 5139268 5139402 -67014480 + MER5B DNA MER1_type 5 148 -30 347 297 67 24 chr20 5140642 5140851 -67013031 - L1ME4a LINE L1 -288 5833 5616 249 286 13 13 chr20 5140943 5141020 -67012862 - MIR SINE MIR -102 160 84 231 277 9 54 chr20 5141104 5141216 -67012666 - L1ME4a LINE L1 -857 5502 5396 207 188 0 0 chr20 5142067 5142115 -67011767 + C-rich Low_complexity Low_complexity 4 51 0 27 73 0 0 chr20 5142384 5142439 -67011443 + GC_rich Low_complexity Low_complexity 1 55 0 22 0 0 0 chr20 5143019 5143041 -67010841 + GC_rich Low_complexity Low_complexity 1 22 0 1823 136 0 68 chr20 5143804 5144127 -67009755 + AluJo SINE Alu 1 301 -11 1940 244 46 33 chr20 5144840 5145323 -67008559 - MLT1G LTR MaLR 0 590 96 2390 94 0 0 chr20 5145323 5145622 -67008260 + AluSx SINE Alu 2 300 -12 1940 244 46 33 chr20 5145622 5145720 -67008162 - MLT1G LTR MaLR -494 96 1 595 271 110 123 chr20 5146219 5146357 -67007525 - L2 LINE L2 -478 2836 2698 1783 185 0 3 chr20 5146357 5146654 -67007228 - AluJb SINE Alu -16 296 1 595 271 110 123 chr20 5146654 5147169 -67006713 - L2 LINE L2 -616 2698 2022 895 124 51 39 chr20 5147169 5147347 -67006535 - MER5A DNA MER1_type -6 183 4 595 271 110 123 chr20 5147347 5147645 -67006237 - L2 LINE L2 -1292 2022 1722 192 77 0 0 chr20 5148046 5148072 -67005810 + (TC)n Simple_repeat Simple_repeat 2 27 0 26 0 0 27 chr20 5148314 5148338 -67005544 + AT_rich Low_complexity Low_complexity 1 25 -11 2406 88 0 0 chr20 5148338 5148632 -67005250 + AluSx SINE Alu 1 294 -18 26 0 0 27 chr20 5148632 5148644 -67005238 + AT_rich Low_complexity Low_complexity 25 36 0 2201 107 17 0 chr20 5149347 5149636 -67004246 - AluSx SINE Alu -18 294 1 438 311 38 30 chr20 5149960 5150195 -67003687 + LTR16C LTR ERVL 97 333 -158 1126 175 14 153 chr20 5152135 5152180 -67001702 + MLT1A1 LTR MaLR 1 51 -314 2233 102 0 7 chr20 5152180 5152474 -67001408 - AluSx SINE Alu -20 292 1 1126 175 14 153 chr20 5152474 5152793 -67001089 + MLT1A1 LTR MaLR 51 314 -51 2718 128 57 0 chr20 5153078 5153499 -67000383 - MER65A LTR ERV1 0 445 1 21 36 0 0 chr20 5153653 5153681 -67000201 + AT_rich Low_complexity Low_complexity 1 28 0 257 174 58 43 chr20 5153776 5153845 -67000037 - L1ME LINE L1 -270 5851 5782 264 164 164 0 chr20 5153919 5153986 -66999896 - L1M3 LINE L1 -561 5607 5530 556 176 34 8 chr20 5155202 5155321 -66998561 - MER3 DNA MER1_type -18 191 70 1605 266 42 13 chr20 5155336 5155810 -66998072 + MER74B LTR ERVL 60 547 -75 1855 138 95 0 chr20 5155875 5156158 -66997724 + AluSg SINE Alu 1 310 0 375 154 0 0 chr20 5156174 5156239 -66997643 + GA-rich Low_complexity Low_complexity 1 65 0 678 189 8 15 chr20 5156361 5156493 -66997389 - FLAM_A SINE Alu -2 131 1 2150 104 21 10 chr20 5156882 5157171 -66996711 - AluSx SINE Alu -20 292 1 231 277 131 15 chr20 5157372 5157502 -66996380 - MER21B LTR ERV1 -11 852 708 2864 10 0 3 chr20 5157580 5157892 -66995990 - AluY SINE Alu 0 311 1 375 241 108 59 chr20 5157895 5158098 -66995784 - HAL1 LINE L1 -1536 971 759 999 278 65 39 chr20 5158116 5158547 -66995335 - HAL1 LINE L1 -1860 647 206 484 254 76 45 chr20 5158658 5158946 -66994936 + L2 LINE L2 1968 2264 -1050 323 313 30 0 chr20 5158947 5159081 -66994801 - L2 LINE L2 -287 3026 2889 526 203 177 32 chr20 5159362 5159520 -66994362 + MER5A DNA MER1_type 9 189 0 249 282 0 68 chr20 5159687 5159790 -66994092 + L3 LINE CR1 1481 1576 -1 462 280 80 19 chr20 5159871 5160179 -66993703 - L1ME LINE L1 -747 5399 5269 396 71 0 0 chr20 5160238 5160294 -66993588 + (CA)n Simple_repeat Simple_repeat 2 57 0 1740 143 35 7 chr20 5160321 5160608 -66993274 + AluSx SINE Alu 1 295 -17 599 125 118 205 chr20 5160781 5160942 -66992940 + MLT1A2 LTR MaLR 3 142 -248 2244 95 7 0 chr20 5160942 5161237 -66992645 + AluSq SINE Alu 1 297 -16 599 125 118 205 chr20 5161237 5161342 -66992540 + MLT1A2 LTR MaLR 142 255 -135 2425 81 3 0 chr20 5162068 5162377 -66991505 + AluSq SINE Alu 1 310 -3 366 208 123 39 chr20 5162407 5162537 -66991345 + L1ME4a LINE L1 5970 6110 -11 311 231 69 39 chr20 5162593 5162723 -66991159 + L1ME4a LINE L1 5932 6065 -56 335 287 55 85 chr20 5162795 5162912 -66990970 - HAL1 LINE L1 -1097 1410 1291 4377 108 21 57 chr20 5162912 5163628 -66990254 - LTR8 LTR ERV1 0 691 2 335 287 55 85 chr20 5163628 5163817 -66990065 - HAL1 LINE L1 -1216 1291 1113 705 144 0 0 chr20 5164228 5164332 -66989550 - AluSx SINE Alu -22 288 185 252 146 91 0 chr20 5164348 5164403 -66989479 + LTR1B LTR ERV1 43 102 -724 491 242 121 18 chr20 5164413 5164578 -66989304 + LTR1 LTR ERV1 36 217 -568 661 222 146 77 chr20 5164673 5164907 -66988975 + LTR28 LTR ERV1 343 589 -237 1405 124 0 0 chr20 5164974 5165159 -66988723 - AluSx SINE Alu -123 189 5 4657 114 12 0 chr20 5165210 5165882 -66988000 + L1PB4 LINE L1 5463 6282 -21 608 151 0 0 chr20 5166298 5166391 -66987491 + AluJ/FLAM SINE Alu 2 94 -218 1331 92 11 0 chr20 5166391 5166575 -66987307 - MER30 DNA MER1_type -44 186 1 1303 201 16 33 chr20 5166601 5166904 -66986978 - L1MB7 LINE L1 -1 6183 5886 4548 103 37 83 chr20 5166904 5167319 -66986563 + MER4E LTR ERV1 1 434 -345 2197 48 58 55 chr20 5167319 5167628 -66986254 + AluY SINE Alu 1 310 -1 4548 103 37 83 chr20 5167628 5167756 -66986126 + MER4E LTR ERV1 434 566 -213 2397 137 36 5 chr20 5167756 5168142 -66985740 - MER48 LTR ERV1 0 398 1 4548 103 37 83 chr20 5168142 5168414 -66985468 + MER4E LTR ERV1 566 779 0 3249 186 24 16 chr20 5168414 5168475 -66985407 - L1MB7 LINE L1 -289 5889 5830 1872 157 7 0 chr20 5168475 5168768 -66985114 - AluJb SINE Alu -17 295 1 3249 186 24 16 chr20 5168768 5169146 -66984736 - L1MB7 LINE L1 -348 5830 5456 1434 158 114 70 chr20 5169146 5169575 -66984307 - LTR7 LTR ERV1 -2 448 1 3249 186 24 16 chr20 5169575 5170235 -66983647 - L1MB7 LINE L1 -722 5456 4781 1865 208 123 64 chr20 5170245 5170759 -66983123 - L1MCa LINE L1 -3953 2611 2172 254 33 0 0 chr20 5170759 5170789 -66983093 - MSTC LTR MaLR -75 353 324 1865 208 123 64 chr20 5170789 5171172 -66982710 - L1MCa LINE L1 -4392 2172 1813 1289 297 11 23 chr20 5171162 5171633 -66982249 - L1MCa LINE L1 -5576 469 5 * 383 198 222 12 chr20 5171845 5172012 -66981870 - L2 LINE L2 -2176 1138 937 1007 215 20 28 chr20 5172862 5173113 -66980769 - MSTD LTR MaLR 0 396 148 1807 32 28 0 chr20 5173131 5173347 -66980535 + L1PA5 LINE L1 5928 6149 -5 613 86 39 0 chr20 5173347 5173475 -66980407 + (TA)n Simple_repeat Simple_repeat 2 134 0 387 0 0 0 chr20 5173475 5173518 -66980364 + (CA)n Simple_repeat Simple_repeat 2 44 0 693 164 8 22 chr20 5173528 5173662 -66980220 - MSTD LTR MaLR -264 132 1 2292 98 7 10 chr20 5173890 5174196 -66979686 + AluSx SINE Alu 6 310 -2 586 234 30 14 chr20 5174586 5174751 -66979131 - MER77 LTR ERV1 -7 598 426 763 127 17 17 chr20 5174761 5174879 -66979003 + FRAM SINE Alu 21 138 -38 813 276 91 111 chr20 5174919 5175298 -66978584 - MER77 LTR ERV1 -117 488 81 5854 127 14 29 chr20 5175749 5176888 -66976994 + L1PB3 LINE L1 5031 6154 0 1306 213 281 19 chr20 5177358 5177781 -66976101 + MLT1F LTR MaLR 9 542 0 225 331 12 41 chr20 5177843 5178015 -66975867 - L2 LINE L2 -1626 1688 1522 1896 137 14 0 chr20 5178288 5178590 -66975292 + AluJb SINE Alu 1 306 0 880 191 0 0 chr20 5178680 5178837 -66975045 - MER3 DNA MER1_type -52 157 1 400 249 127 71 chr20 5179023 5179488 -66974394 + L1M4 LINE L1 3782 4273 -1873 1825 228 94 4 chr20 5179534 5180021 -66973861 + MER90 LTR ERV1 84 614 0 1977 152 30 0 chr20 5180046 5180343 -66973539 + AluJo SINE Alu 1 306 -6 1210 83 12 0 chr20 5180558 5180727 -66973155 - L1MB1 LINE L1 0 6168 5998 1319 97 0 43 chr20 5180727 5180913 -66972969 - AluSq SINE Alu -135 178 1 2977 123 65 45 chr20 5180915 5181467 -66972415 - L1MB1 LINE L1 -361 5828 5266 1431 196 0 4 chr20 5181475 5181705 -66972177 + MER8 DNA MER2_type 11 239 0 4834 198 47 15 chr20 5181705 5182732 -66971150 - L1MB1 LINE L1 -878 5268 4201 2077 143 0 0 chr20 5182732 5183026 -66970856 + AluSx SINE Alu 2 295 -17 4834 198 47 15 chr20 5183026 5183097 -66970785 - L1MB1 LINE L1 -1945 4201 4134 233 209 23 0 chr20 5183099 5183142 -66970740 - MER47B DNA MER2_type -374 44 1 531 158 0 0 chr20 5183157 5183239 -66970643 + MER47B DNA MER2_type 336 417 -1 658 138 0 0 chr20 5183264 5183358 -66970524 - Tigger1 DNA MER2_type -586 1832 1739 1096 156 0 0 chr20 5183358 5183525 -66970357 - AluSc SINE Alu -2 307 141 7097 151 17 12 chr20 5183531 5184678 -66969204 + THE1B-int LTR MaLR 427 1579 -1 742 80 143 2 chr20 5184680 5184792 -66969090 + THE1B LTR MaLR 3 121 -247 1602 88 4 18 chr20 5184792 5185018 -66968864 + MSTA-int LTR MaLR 1358 1580 0 2362 126 59 45 chr20 5185018 5185440 -66968442 + MSTA LTR MaLR 1 428 0 9282 123 6 4 chr20 5185442 5187121 -66966761 - Tigger1 DNA MER2_type -749 1669 1 1313 268 48 21 chr20 5187122 5187733 -66966149 - L1M3de LINE L1 -4982 909 4 1898 190 58 85 chr20 5188123 5188292 -66965590 + MER92B LTR ERV1 1 173 -463 2046 139 39 18 chr20 5188292 5188622 -66965260 - MER1B DNA MER1_type 0 337 1 1898 190 58 85 chr20 5188622 5188879 -66965003 + MER92B LTR ERV1 173 409 -227 2265 116 0 19 chr20 5188879 5189197 -66964685 - AluSx SINE Alu 0 312 1 1898 190 58 85 chr20 5189197 5189369 -66964513 + MER92B LTR ERV1 409 584 -52 1333 195 0 0 chr20 5189369 5189584 -66964298 - AluJo SINE Alu -14 298 84 834 207 0 0 chr20 5189863 5190008 -66963874 + FRAM SINE Alu 2 146 -30 1993 156 17 0 chr20 5190012 5190307 -66963575 - AluSx SINE Alu -10 302 3 1991 126 0 0 chr20 5191204 5191473 -66962409 + AluSx SINE Alu 1 269 -43 232 214 36 0 chr20 5192400 5192456 -66961426 + CT-rich Low_complexity Low_complexity 1 58 0 248 233 14 0 chr20 5192672 5192745 -66961137 + CT-rich Low_complexity Low_complexity 3 76 0 1676 176 10 30 chr20 5192768 5193069 -66960813 - AluJo SINE Alu -13 299 5 511 206 198 71 chr20 5193074 5193438 -66960444 - LTR16A1 LTR ERVL -37 420 11 863 294 202 29 chr20 5193517 5194982 -66958900 - L2 LINE L2 -4 3309 1565 2558 134 20 0 chr20 5195090 5195486 -66958396 + LTR26 LTR ERV1 1 404 -199 2680 154 11 50 chr20 5195562 5196107 -66957775 - LTR26B LTR ERV1 -7 524 1 2058 116 3 42 chr20 5196119 5196454 -66957428 - THE1C LTR MaLR -53 322 1 7812 114 10 5 chr20 5196454 5197685 -66956197 - THE1C-int LTR MaLR 0 1580 312 551 241 68 0 chr20 5198753 5198915 -66954967 - L1M4 LINE L1 -3379 2767 2595 1239 135 0 36 chr20 5198915 5199108 -66954774 - AluJo SINE Alu -7 305 120 520 205 49 0 chr20 5199710 5199832 -66954050 + MER94 DNA DNA 1 128 -6 207 204 0 0 chr20 5200553 5200602 -66953280 + CT-rich Low_complexity Low_complexity 1 49 0 1423 169 37 36 chr20 5200775 5200801 -66953081 - MLT2D LTR ERVL 0 414 390 402 21 0 0 chr20 5200801 5200848 -66953034 + (TG)n Simple_repeat Simple_repeat 2 48 0 1423 169 37 36 chr20 5200848 5201170 -66952712 - MLT2D LTR ERVL -24 390 1 296 272 52 44 chr20 5201293 5201429 -66952453 - MIR3 SINE MIR -65 143 7 2266 107 0 13 chr20 5202323 5202633 -66951249 + AluSg SINE Alu 1 306 -4 240 86 0 0 chr20 5206231 5206266 -66947616 + (A)n Simple_repeat Simple_repeat 1 35 0 205 232 11 105 chr20 5206273 5206368 -66947514 - MIR SINE MIR 0 262 177 397 188 0 38 chr20 5206369 5206449 -66947433 + MER116 DNA Mariner 2 78 -2 1901 121 0 93 chr20 5206666 5207013 -66946869 + AluSx SINE Alu 1 318 0 619 228 91 10 chr20 5207333 5207530 -66946352 + LTR33 LTR ERVL 308 520 -1 1917 104 93 11 chr20 5208441 5208720 -66945162 + AluSx SINE Alu 2 303 -9 383 286 29 100 chr20 5208785 5209134 -66944748 + MLT1I LTR MaLR 71 394 -15 2233 130 14 9 chr20 5210092 5210437 -66943445 - MER7A DNA MER2_type 0 346 2 671 281 130 4 chr20 5210444 5210675 -66943207 - MIR SINE MIR -1 261 2 791 199 37 0 chr20 5210921 5211082 -66942800 - MER5A DNA MER1_type -3 186 20 22 35 0 0 chr20 5212349 5212378 -66941504 + AT_rich Low_complexity Low_complexity 1 29 0 972 222 94 0 chr20 5212431 5212634 -66941248 + MIR SINE MIR 17 238 -24 722 129 11 0 chr20 5212665 5212794 -66941088 + L1MB3 LINE L1 5825 5957 -211 1385 140 4 25 chr20 5212842 5213085 -66940797 + L1MB3 LINE L1 5944 6181 -2 723 283 88 23 chr20 5213259 5213602 -66940280 + L1MC4a LINE L1 5578 5942 -1866 1609 160 42 11 chr20 5213609 5213872 -66940010 + AluSx SINE Alu 3 273 -39 402 74 0 0 chr20 5213873 5213927 -66939955 + (GGGGA)n Simple_repeat Simple_repeat 1 54 0 941 148 7 0 chr20 5215276 5215418 -66938464 - FLAM_C SINE Alu 0 143 1 270 218 39 13 chr20 5215717 5215782 -66938100 + (TATAG)n Simple_repeat Simple_repeat 5 74 -10 1725 151 0 96 chr20 5215782 5215935 -66937947 + AluJo SINE Alu 2 107 -195 1764 119 12 4 chr20 5215935 5216188 -66937694 + AluSq SINE Alu 11 265 -48 1725 151 0 96 chr20 5216188 5216366 -66937516 + AluJo SINE Alu 107 301 -1 270 218 39 13 chr20 5216366 5216378 -66937504 + (TATAG)n Simple_repeat Simple_repeat 74 84 0 2072 124 0 3 chr20 5220181 5220495 -66933387 + AluSx SINE Alu 1 313 0 439 225 137 85 chr20 5220501 5220794 -66933088 + L1ME3A LINE L1 5742 6049 -121 2216 130 0 0 chr20 5221468 5221775 -66932107 + AluSx SINE Alu 1 307 -5 1361 174 170 0 chr20 5221985 5222296 -66931586 - MLT1A1 LTR MaLR 0 365 2 341 202 45 11 chr20 5223248 5223337 -66930545 - L1MC4 LINE L1 -1337 6705 6614 781 146 47 113 chr20 5223339 5223369 -66930513 - MER20 DNA MER1_type 0 219 189 2169 109 0 3 chr20 5223369 5223677 -66930205 - AluSq SINE Alu 0 308 2 781 146 47 113 chr20 5223677 5223704 -66930178 - MER20 DNA MER1_type -30 189 162 908 176 0 24 chr20 5223704 5223874 -66930008 - FRAM SINE Alu 0 166 1 781 146 47 113 chr20 5223874 5224026 -66929856 - MER20 DNA MER1_type -57 162 22 2381 131 53 51 chr20 5224027 5224494 -66929388 + L1MB3 LINE L1 5708 6175 -8 313 232 0 0 chr20 5224494 5224550 -66929332 + L1MC4 LINE L1 6648 6703 -1339 1975 155 0 7 chr20 5224553 5224849 -66929033 - AluJb SINE Alu -18 294 1 1031 181 13 44 chr20 5224929 5225110 -66928772 + MLT1D LTR MaLR 267 452 -53 1792 190 0 10 chr20 5225110 5225415 -66928467 + AluJo SINE Alu 1 302 -10 1888 147 9 34 chr20 5225415 5225735 -66928147 + AluJb SINE Alu 1 312 0 1031 181 13 44 chr20 5225735 5225778 -66928104 + MLT1D LTR MaLR 450 485 -20 28 0 0 0 chr20 5225864 5225892 -66927990 + AT_rich Low_complexity Low_complexity 1 28 0 2128 94 56 3 chr20 5225988 5226276 -66927606 - AluSx SINE Alu -9 303 1 343 316 165 14 chr20 5226361 5226646 -66927236 - L2 LINE L2 0 3272 2945 1748 213 48 21 chr20 5226743 5227227 -66926655 + MLT1D LTR MaLR 1 497 -8 194 275 73 73 chr20 5227242 5227351 -66926531 - L2 LINE L2 -583 2731 2623 181 340 107 14 chr20 5227750 5227965 -66925917 - L2 LINE L2 -1241 2073 1839 1712 157 27 27 chr20 5228090 5228383 -66925499 - AluJo SINE Alu -19 293 1 423 263 52 66 chr20 5228913 5229202 -66924680 + L1 LINE L1 5118 5402 -744 190 273 30 30 chr20 5229288 5229387 -66924495 + L2 LINE L2 2168 2266 -1048 1981 153 7 0 chr20 5230125 5230413 -66923469 - AluJo SINE Alu -12 300 11 1043 199 178 23 chr20 5231301 5231694 -66922188 - LTR16A1 LTR ERVL -3 454 1 1418 188 59 26 chr20 5232721 5232993 -66920889 + AluJo SINE Alu 6 286 -26 180 0 0 0 chr20 5232993 5233013 -66920869 + (CAAAT)n Simple_repeat Simple_repeat 2 21 0 520 258 17 0 chr20 5233013 5233133 -66920749 + MER5B DNA MER1_type 57 178 0 622 241 21 7 chr20 5233911 5234056 -66919826 - MIR SINE MIR -69 193 47 817 185 12 19 chr20 5234164 5234326 -66919556 - MER5A DNA MER1_type -1 188 28 327 266 142 0 chr20 5234334 5234447 -66919435 - MIR SINE MIR -54 208 80 235 225 27 0 chr20 5235362 5235519 -66918363 + (TG)n Simple_repeat Simple_repeat 1 190 0 22 56 0 0 chr20 5237622 5237658 -66916224 + AT_rich Low_complexity Low_complexity 1 36 0 1854 154 3 17 chr20 5237670 5237962 -66915920 + AluJo SINE Alu 13 300 -12 1648 155 0 7 chr20 5237992 5238283 -66915599 + L1MB4 LINE L1 5890 6178 -2 547 297 104 55 chr20 5238302 5238470 -66915412 - L1ME4a LINE L1 -61 6060 5902 2279 82 0 4 chr20 5238470 5238749 -66915133 + AluSq SINE Alu 11 288 -25 547 297 104 55 chr20 5238749 5239001 -66914881 - L1ME4a LINE L1 -219 5902 5619 231 118 0 0 chr20 5239124 5239158 -66914724 - MER63 DNA MER1_type -402 34 1 232 279 88 0 chr20 5239525 5239593 -66914289 - MIR3 SINE MIR -23 185 112 2334 113 0 0 chr20 5239623 5239916 -66913966 + AluSx SINE Alu 1 293 -19 788 217 38 71 chr20 5240110 5240322 -66913560 - MER63A DNA MER1_type -5 205 1 403 200 131 39 chr20 5240484 5240589 -66913293 - MIR SINE MIR -24 238 117 2493 96 0 0 chr20 5240589 5240901 -66912981 - AluSq SINE Alu -1 312 1 403 200 131 39 chr20 5240901 5240925 -66912957 - MIR SINE MIR -145 117 97 675 269 133 37 chr20 5240944 5241215 -66912667 - LTR16C LTR ERVL 0 491 195 1905 153 6 31 chr20 5241861 5242181 -66911701 + AluJo SINE Alu 1 312 0 21 71 0 0 chr20 5244716 5244758 -66909124 + GC_rich Low_complexity Low_complexity 1 42 0 24 0 0 0 chr20 5244925 5244949 -66908933 + GC_rich Low_complexity Low_complexity 1 24 0 307 344 0 39 chr20 5245139 5245319 -66908563 + C-rich Low_complexity Low_complexity 4 176 0 2127 140 3 13 chr20 5246722 5247037 -66906845 - AluJo SINE Alu 0 312 1 2134 122 14 3 chr20 5247287 5247583 -66906299 - AluSq SINE Alu -14 299 1 1077 91 0 0 chr20 5247705 5247837 -66906045 + AluSq/x SINE Alu 1 132 -181 1867 167 15 13 chr20 5247837 5248232 -66905650 - Charlie5 DNA MER1_type -3 2609 2214 420 142 82 97 chr20 5248218 5248266 -66905616 - MER3 DNA MER1_type -40 122 122 * 2674 49 0 0 chr20 5248266 5248570 -66905312 + AluY SINE Alu 1 304 -7 420 142 82 97 chr20 5248570 5248655 -66905227 - MER3 DNA MER1_type -39 123 38 2263 98 14 0 chr20 5249011 5249333 -66904549 + AluSq SINE Alu 1 313 0 769 296 98 15 chr20 5249558 5249832 -66904050 - LTR16C LTR ERVL 0 491 195 2326 89 16 22 chr20 5249909 5250222 -66903660 + AluSx SINE Alu 1 311 -1 2035 228 61 23 chr20 5251305 5251832 -66902050 + MLT1H LTR MaLR 1 547 -2 252 86 0 0 chr20 5252394 5252429 -66901453 + (GAAAA)n Simple_repeat Simple_repeat 2 36 0 331 229 0 76 chr20 5252721 5252826 -66901056 + L1MC4 LINE L1 6611 6707 -1335 1891 149 30 7 chr20 5253079 5253380 -66900502 + AluJb SINE Alu 1 308 -4 306 316 89 59 chr20 5253382 5253740 -66900142 + HAL1 LINE L1 895 1263 -1244 290 261 43 87 chr20 5253846 5253961 -66899921 + L2 LINE L2 3195 3304 -9 231 65 0 0 chr20 5254071 5254102 -66899780 - L1P4 LINE L1 -436 5732 5702 848 160 0 0 chr20 5254103 5254228 -66899654 + FLAM_C SINE Alu 1 125 -18 2171 92 112 9 chr20 5254254 5254601 -66899281 + L1PA15 LINE L1 5777 6159 -6 306 297 14 14 chr20 5254829 5254967 -66898915 + HAL1b LINE L1 670 807 -541 1362 197 0 28 chr20 5255512 5255766 -66898116 + AluJo SINE Alu 44 290 -22 288 0 0 0 chr20 5256487 5256519 -66897363 + (TA)n Simple_repeat Simple_repeat 2 33 0 2486 84 0 0 chr20 5256527 5256837 -66897045 - AluSg SINE Alu 0 310 1 21 0 0 0 chr20 5256837 5256858 -66897024 + AT_rich Low_complexity Low_complexity 1 21 0 280 288 76 0 chr20 5257007 5257125 -66896757 - L2 LINE L2 -338 2976 2850 183 333 90 9 chr20 5257864 5257975 -66895907 - L2 LINE L2 -446 2868 2749 360 240 20 10 chr20 5257978 5258078 -66895804 - MLT2E LTR ERVL -50 578 478 765 284 171 19 chr20 5258092 5258292 -66895590 - MLT2F LTR ERVL -103 560 392 1833 144 13 33 chr20 5258292 5258598 -66895284 + AluJo SINE Alu 1 300 -12 765 284 171 19 chr20 5258598 5258883 -66894999 - MLT2F LTR ERVL -271 392 1 276 423 16 0 chr20 5259180 5259362 -66894520 - L2 LINE L2 -558 2756 2572 2201 100 3 17 chr20 5359439 5359740 -66794142 - AluSc SINE Alu -11 298 2 2222 96 3 3 chr20 5359748 5360040 -66793842 - AluSx SINE Alu -20 292 1 2443 85 0 0 chr20 5360281 5360587 -66793295 + AluY SINE Alu 1 306 -5 2263 118 0 0 chr20 5360753 5361059 -66792823 + AluSx SINE Alu 1 306 -6 2359 88 7 0 chr20 5361348 5361645 -66792237 + AluSx SINE Alu 1 299 -13 2386 78 16 3 chr20 5361937 5362246 -66791636 - AluSp SINE Alu 0 313 1 2087 111 13 13 chr20 5363551 5363858 -66790024 + AluSx SINE Alu 1 307 -5 23 0 0 0 chr20 5364535 5364558 -66789324 + AT_rich Low_complexity Low_complexity 1 23 0 1727 154 45 17 chr20 5364630 5364922 -66788960 - AluJb SINE Alu -12 300 1 1619 165 74 3 chr20 5364931 5365100 -66788782 - AluJb SINE Alu -7 305 106 279 0 0 0 chr20 5365100 5365131 -66788751 + (TG)n Simple_repeat Simple_repeat 2 32 0 1619 165 74 3 chr20 5365131 5365246 -66788636 - AluJb SINE Alu -206 106 1 1767 189 0 13 chr20 5365667 5365980 -66787902 - AluJb SINE Alu -3 309 1 277 224 0 0 chr20 5366476 5366534 -66787348 - L1MC/D LINE L1 -2055 5753 5696 1137 162 0 0 chr20 5366683 5366850 -66787032 + FRAM SINE Alu 2 168 -8 2250 118 0 6 chr20 5367042 5367357 -66786525 + AluSp SINE Alu 1 313 0 2221 109 0 13 chr20 5367410 5367714 -66786168 + AluSg SINE Alu 1 300 -10 333 0 0 0 chr20 5369577 5369614 -66784268 + (TG)n Simple_repeat Simple_repeat 2 38 0 1159 190 90 13 chr20 5369722 5370022 -66783860 - MER33 DNA MER1_type -1 323 1 1550 189 27 30 chr20 5370340 5370440 -66783442 - AluJo SINE Alu -17 295 196 2212 117 0 0 chr20 5370440 5370739 -66783143 - AluSx SINE Alu -13 299 1 1550 189 27 30 chr20 5370739 5370934 -66782948 - AluJo SINE Alu -116 196 1 349 205 256 0 chr20 5371397 5371514 -66782368 - L1ME4a LINE L1 -11 6110 5964 228 133 67 0 chr20 5371515 5371560 -66782322 + CT-rich Low_complexity Low_complexity 3 50 0 1116 134 34 6 chr20 5371561 5371740 -66782142 - AluJb SINE Alu 0 312 129 426 298 30 38 chr20 5371864 5372129 -66781753 - L1ME4a LINE L1 -303 5818 5556 1632 151 50 4 chr20 5372131 5372389 -66781493 + AluJo SINE Alu 3 272 -40 1517 107 0 47 chr20 5372489 5372723 -66781159 + AluSg/x SINE Alu 83 305 -5 798 164 0 0 chr20 5372723 5372839 -66781043 - AluJo/FLAM SINE Alu -186 116 1 383 143 57 0 chr20 5372977 5373047 -66780835 + FLAM_A SINE Alu 60 133 0 2327 92 0 3 chr20 5374026 5374320 -66779562 + AluSg SINE Alu 14 306 -4 815 153 8 0 chr20 5374424 5374548 -66779334 + FLAM_C SINE Alu 1 125 -18 22 35 0 0 chr20 5374555 5374584 -66779298 + AT_rich Low_complexity Low_complexity 1 29 0 323 265 108 34 chr20 5374918 5375122 -66778760 + L1ME4a LINE L1 5268 5486 -692 542 230 155 24 chr20 5375227 5375518 -66778364 + L1ME4a LINE L1 5635 5963 -158 2206 110 7 7 chr20 5375523 5375832 -66778050 - AluSx SINE Alu -3 309 1 443 252 132 13 chr20 5376423 5376582 -66777300 + MER5B DNA MER1_type 1 178 0 189 0 0 0 chr20 5376663 5376684 -66777198 + (TCCC)n Simple_repeat Simple_repeat 4 24 0 2062 152 0 0 chr20 5376691 5377001 -66776881 - AluY SINE Alu -1 310 1 2344 87 0 0 chr20 5377003 5377291 -66776591 - AluSg SINE Alu -20 290 3 2761 175 46 72 chr20 5377427 5377824 -66776058 + L1MB7 LINE L1 4553 4959 -1194 2424 88 3 0 chr20 5377824 5378120 -66775762 + AluSp SINE Alu 1 297 -16 2761 175 46 72 chr20 5378120 5378365 -66775517 + L1MB7 LINE L1 4959 5209 -944 2441 76 3 0 chr20 5378365 5378666 -66775216 + AluY SINE Alu 1 302 -9 2761 175 46 72 chr20 5378666 5378677 -66775205 + L1MB7 LINE L1 5209 5219 -934 2386 75 14 0 chr20 5378677 5378971 -66774911 + AluSp SINE Alu 1 298 -15 2761 175 46 72 chr20 5378971 5379129 -66774753 + L1MB7 LINE L1 5219 5340 -813 694 175 58 7 chr20 5379135 5379272 -66774610 + FAM SINE Alu 14 157 -28 2488 68 3 0 chr20 5379272 5379567 -66774315 + AluY SINE Alu 1 296 -15 3342 164 122 37 chr20 5379589 5379856 -66774026 + L1MB7 LINE L1 5317 5560 -624 2081 134 0 3 chr20 5379856 5380155 -66773727 + AluSc SINE Alu 1 298 -11 3342 164 122 37 chr20 5380155 5380450 -66773432 + L1MB7 LINE L1 5560 5829 -355 2218 121 0 0 chr20 5380450 5380748 -66773134 - AluSx SINE Alu -14 298 1 3342 164 122 37 chr20 5380748 5380972 -66772910 + L1MB7 LINE L1 5829 6171 -13 681 159 48 8 chr20 5381186 5381312 -66772570 + FLAM_C SINE Alu 1 131 -2 2038 123 0 0 chr20 5381346 5381614 -66772268 - AluSq SINE Alu -45 268 1 432 55 0 0 chr20 5381634 5381689 -66772193 + (CA)n Simple_repeat Simple_repeat 2 56 0 2523 52 7 0 chr20 5382565 5382856 -66771026 + AluY SINE Alu 1 293 -18 2178 118 0 10 chr20 5383015 5383312 -66770570 + AluSq SINE Alu 1 294 -19 1877 113 21 25 chr20 5383318 5383454 -66770428 + AluSq SINE Alu 1 136 -177 2252 129 0 0 chr20 5383454 5383763 -66770119 + AluSc SINE Alu 1 309 0 1877 113 21 25 chr20 5383763 5383908 -66769974 + AluSq SINE Alu 136 281 -32 2367 85 7 13 chr20 5383954 5384260 -66769622 + AluSg SINE Alu 1 304 -6 1408 126 0 9 chr20 5384313 5384527 -66769355 - MER46B DNA MER2_type 0 236 25 821 231 19 0 chr20 5384529 5384685 -66769197 + FRAM SINE Alu 1 159 -17 650 134 228 0 chr20 5384685 5384812 -66769070 - MER46B DNA MER2_type -201 35 5 268 237 183 15 chr20 5384905 5385036 -66768846 + MLT1J1 LTR MaLR 33 185 -261 260 269 0 0 chr20 5385086 5385138 -66768744 + MLT1J2 LTR MaLR 280 331 -119 661 198 9 0 chr20 5385238 5385354 -66768528 + FLAM_C SINE Alu 2 118 -25 2008 135 3 10 chr20 5385359 5385671 -66768211 - AluSx SINE Alu -2 310 1 1807 120 48 10 chr20 5385699 5385991 -66767891 + AluSq SINE Alu 1 303 -10 1358 205 7 17 chr20 5386110 5386398 -66767484 - AluJo SINE Alu -16 296 12 2192 111 0 0 chr20 5386441 5386720 -66767162 + AluSg SINE Alu 1 279 -31 396 0 0 0 chr20 5386720 5386764 -66767118 + (CA)n Simple_repeat Simple_repeat 1 44 0 242 263 0 25 chr20 5386817 5386897 -66766985 + L1M4 LINE L1 4519 4596 -1550 1666 80 0 0 chr20 5386912 5387111 -66766771 + AluSg/x SINE Alu 86 284 -28 2380 88 3 7 chr20 5387503 5387809 -66766073 - AluSp SINE Alu -8 305 1 1033 154 0 154 chr20 5387883 5387996 -66765886 + MER46A DNA MER2_type 1 47 -2684 2193 75 0 91 chr20 5387996 5388327 -66765555 + AluY SINE Alu 1 301 -10 1033 154 0 154 chr20 5388327 5388492 -66765390 + MER46A DNA MER2_type 47 236 0 1491 127 79 89 chr20 5388799 5389090 -66764792 + AluJb SINE Alu 1 288 -24 251 94 0 0 chr20 5389153 5389185 -66764697 - MER58A DNA MER1_type -3 221 190 283 208 0 0 chr20 5389200 5389253 -66764629 - MER58A DNA MER1_type -15 92 40 * 440 236 0 0 chr20 5389252 5389341 -66764541 + MER5A DNA MER1_type 17 105 -84 1984 113 78 0 chr20 5389502 5389785 -66764097 + AluSg SINE Alu 1 305 -5 1271 128 6 0 chr20 5389785 5389964 -66763918 + AluSq SINE Alu 134 313 0 324 357 40 20 chr20 5390686 5390885 -66762997 + MIR SINE MIR 27 229 -33 2399 110 0 0 chr20 5391405 5391715 -66762167 + AluSg SINE Alu 1 310 0 718 243 283 28 chr20 5391878 5392477 -66761405 + L2 LINE L2 2231 2676 -637 1262 201 67 62 chr20 5392477 5392634 -66761248 + MLT1B LTR MaLR 1 156 -234 1471 161 113 0 chr20 5392634 5392792 -66761090 - AluJb SINE Alu -20 292 95 216 0 0 0 chr20 5392792 5392816 -66761066 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 1471 161 113 0 chr20 5392816 5392905 -66760977 - AluJb SINE Alu -217 95 17 1262 201 67 62 chr20 5392905 5393135 -66760747 + MLT1B LTR MaLR 156 390 0 718 243 283 28 chr20 5393135 5393348 -66760534 + L2 LINE L2 2676 3312 -1 2290 104 7 0 chr20 5393805 5394104 -66759778 - AluSx SINE Alu -11 301 1 942 140 0 7 chr20 5394556 5394692 -66759190 - FLAM_C SINE Alu -8 135 1 227 286 66 22 chr20 5395352 5395443 -66758439 - MIR SINE MIR -92 116 22 24 0 0 0 chr20 5396141 5396165 -66757717 + GC_rich Low_complexity Low_complexity 1 24 0 21 57 0 0 chr20 5396199 5396234 -66757648 + GC_rich Low_complexity Low_complexity 1 35 0 32 111 0 0 chr20 5396255 5396399 -66757483 + GC_rich Low_complexity Low_complexity 1 144 0 24 32 0 0 chr20 5396507 5396538 -66757344 + GC_rich Low_complexity Low_complexity 1 31 0 218 186 0 86 chr20 5396551 5396621 -66757261 + C-rich Low_complexity Low_complexity 1 64 0 340 211 0 0 chr20 5397069 5397137 -66756745 - MER5A DNA MER1_type -81 101 32 406 259 41 41 chr20 5397188 5397358 -66756524 + MER5A DNA MER1_type 18 187 -2 * 904 178 0 6 chr20 5397211 5397374 -66756508 - MER5A DNA MER1_type -27 162 1 864 220 23 0 chr20 5397721 5397894 -66755988 - AluJb SINE Alu -2 310 134 507 131 0 24 chr20 5397905 5397989 -66755893 + MER4A LTR ERV1 583 664 0 2505 21 0 3 chr20 5398101 5398423 -66755459 + AluY SINE Alu 1 321 0 755 168 23 15 chr20 5399563 5399694 -66754188 + FLAM_C SINE Alu 1 132 -1 2427 57 7 0 chr20 5399717 5400069 -66753813 + AluSp SINE Alu 1 354 0 1368 118 3 132 chr20 5400599 5400705 -66753177 - MER58D DNA MER1_type -2042 378 260 2428 72 7 0 chr20 5400705 5400996 -66752886 + AluSq SINE Alu 1 293 -20 1368 118 3 132 chr20 5400996 5401087 -66752795 - MER58D DNA MER1_type -2160 260 243 2219 113 0 7 chr20 5401087 5401397 -66752485 - AluSg SINE Alu -2 308 1 1368 118 3 132 chr20 5401397 5401547 -66752335 - MER58D DNA MER1_type -2177 243 75 1776 124 97 0 chr20 5401547 5401840 -66752042 - AluSx SINE Alu 0 318 1 279 79 0 0 chr20 5401948 5401986 -66751896 + (TG)n Simple_repeat Simple_repeat 2 39 0 298 204 0 117 chr20 5401987 5402090 -66751792 + L1ME3A LINE L1 5688 5778 -2030 1413 151 34 50 chr20 5402200 5402244 -66751638 - L1MB8 LINE L1 -13 6167 6124 1976 174 0 0 chr20 5402244 5402555 -66751327 + AluSx SINE Alu 1 311 -1 1413 151 34 50 chr20 5402555 5402836 -66751046 - L1MB8 LINE L1 -56 6124 5851 276 155 0 13 chr20 5402842 5402870 -66751012 + Alu SINE Alu 247 247 -55 417 97 0 108 chr20 5402870 5402909 -66750973 - L1MB4 LINE L1 0 6180 6155 2429 91 0 0 chr20 5402909 5403205 -66750677 - AluSq SINE Alu -17 296 1 417 97 0 108 chr20 5403205 5403258 -66750624 - L1MB4 LINE L1 -25 6155 6098 276 155 0 13 chr20 5403258 5403294 -66750588 + Alu SINE Alu 247 282 -20 875 104 64 0 chr20 5403737 5403862 -66750020 - FLAM_C SINE Alu 0 133 1 363 358 64 9 chr20 5403913 5404243 -66749639 + L2 LINE L2 1758 2105 -1209 290 306 65 9 chr20 5404490 5404598 -66749284 + L2 LINE L2 3136 3249 -23 2476 156 105 49 chr20 5404740 5404809 -66749073 - MLT2B2 LTR ERVL 0 515 451 2651 43 0 0 chr20 5404809 5405109 -66748773 + AluY SINE Alu 1 300 -11 2476 156 105 49 chr20 5405109 5405525 -66748357 - MLT2B2 LTR ERVL -64 451 3 1472 190 11 7 chr20 5405603 5405736 -66748146 + AluJb SINE Alu 1 132 -180 2082 116 24 0 chr20 5405736 5406030 -66747852 + AluSq SINE Alu 1 301 -12 1472 190 11 7 chr20 5406030 5406175 -66747707 + AluJb SINE Alu 132 280 -32 858 126 0 0 chr20 5406180 5406315 -66747567 + (GGAA)n Simple_repeat Simple_repeat 4 138 0 207 0 0 0 chr20 5406504 5406527 -66747355 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 579 265 85 5 chr20 5406532 5406732 -66747150 + L1ME3A LINE L1 5935 6150 -20 2243 92 0 41 chr20 5406737 5407052 -66746830 - AluSq SINE Alu -9 304 3 391 279 19 51 chr20 5407285 5407443 -66746439 + MIR SINE MIR 60 212 -50 219 320 0 40 chr20 5407681 5407756 -66746126 - L2 LINE L2 -13 3259 3188 2321 108 3 6 chr20 5407765 5408079 -66745803 + AluSp SINE Alu 1 313 0 2355 101 0 0 chr20 5408085 5408382 -66745500 + AluSx SINE Alu 1 297 -15 370 150 17 0 chr20 5408912 5408972 -66744910 - AluJ/FLAM SINE Alu -241 61 1 610 280 134 18 chr20 5409124 5409419 -66744463 - L2 LINE L2 -246 3067 2727 1055 183 10 5 chr20 5409419 5409616 -66744266 - AluJo SINE Alu -11 301 104 236 158 0 92 chr20 5409636 5409674 -66744208 + A-rich Low_complexity Low_complexity 2 31 -39 2414 98 0 0 chr20 5409674 5409979 -66743903 + AluSc SINE Alu 1 305 -4 236 158 0 92 chr20 5409979 5410016 -66743866 + A-rich Low_complexity Low_complexity 31 70 0 722 118 0 96 chr20 5410026 5410162 -66743720 - FLAM_C SINE Alu -10 133 11 862 288 87 78 chr20 5410165 5410342 -66743540 - L2 LINE L2 -593 2721 2547 2458 68 3 10 chr20 5410342 5410649 -66743233 - AluY SINE Alu -6 305 1 2459 90 3 0 chr20 5410654 5410965 -66742917 - AluSx SINE Alu 0 312 1 862 288 87 78 chr20 5410965 5410986 -66742896 - L2 LINE L2 -770 2544 2525 2268 133 0 0 chr20 5410986 5411295 -66742587 + AluSx SINE Alu 1 309 -3 862 288 87 78 chr20 5411295 5411759 -66742123 - L2 LINE L2 -789 2525 2046 674 216 0 0 chr20 5411870 5411986 -66741896 + FLAM_C SINE Alu 1 116 -17 204 200 0 0 chr20 5411987 5412047 -66741835 + T-rich Low_complexity Low_complexity 1 60 0 2345 119 0 0 chr20 5412119 5412430 -66741452 + AluSx SINE Alu 1 311 -1 2221 121 7 0 chr20 5412430 5412735 -66741147 + AluSp SINE Alu 1 307 -6 320 247 14 0 chr20 5412735 5412808 -66741074 - LTR16A1 LTR ERVL -14 443 370 492 239 64 0 chr20 5412809 5412918 -66740964 - FLAM_C SINE Alu -24 119 4 916 184 19 6 chr20 5412992 5413150 -66740732 + FRAM SINE Alu 1 160 -16 441 272 45 75 chr20 5413159 5413424 -66740458 - LTR16A1 LTR ERVL -141 316 60 1703 136 0 32 chr20 5413524 5413775 -66740107 + AluSq SINE Alu 1 243 -70 343 212 0 59 chr20 5413912 5413997 -66739885 + MIR SINE MIR 77 156 -106 2018 132 28 0 chr20 5414016 5414303 -66739579 + AluSx SINE Alu 1 295 -17 646 179 37 49 chr20 5414330 5414492 -66739390 - MIR SINE MIR -11 251 92 1869 155 24 10 chr20 5414492 5414788 -66739094 + AluJb SINE Alu 6 305 -7 671 180 0 33 chr20 5414868 5414990 -66738892 + FLAM_C SINE Alu 1 118 -15 2377 108 0 0 chr20 5415197 5415503 -66738379 + AluSx SINE Alu 7 312 0 294 327 192 24 chr20 5415574 5415913 -66737969 - L2 LINE L2 0 3313 2918 519 241 21 7 chr20 5416272 5416413 -66737469 - L1ME3 LINE L1 -50 6112 5970 189 0 0 0 chr20 5416438 5416459 -66737423 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 741 68 0 0 chr20 5416485 5416573 -66737309 + AluSg SINE Alu 52 139 -171 2193 104 0 22 chr20 5416573 5416889 -66736993 + AluSc SINE Alu 1 309 0 1165 239 41 52 chr20 5416889 5417017 -66736865 - L1MC4 LINE L1 -228 7814 7686 2571 74 0 0 chr20 5417017 5417328 -66736554 - AluY SINE Alu 0 311 1 1165 239 41 52 chr20 5417328 5417434 -66736448 - L1MC4 LINE L1 -356 7686 7580 1926 154 30 7 chr20 5417434 5417739 -66736143 - AluJb SINE Alu 0 312 1 1165 239 41 52 chr20 5417739 5417921 -66735961 - L1MC4 LINE L1 -462 7580 7400 796 226 169 19 chr20 5417921 5418045 -66735837 - AluJo SINE Alu -1 301 197 2299 95 20 0 chr20 5418045 5418340 -66735542 - AluSx SINE Alu -9 303 3 796 226 169 19 chr20 5418340 5418476 -66735406 - AluJo SINE Alu -105 197 2 1165 239 41 52 chr20 5418476 5418497 -66735385 - L1MC4 LINE L1 -642 7400 7380 4156 170 47 49 chr20 5418509 5418543 -66735339 - L1MB3 LINE L1 -1 6182 6149 2310 97 3 3 chr20 5418543 5418843 -66735039 - AluSq SINE Alu -13 300 1 4156 170 47 49 chr20 5418843 5419593 -66734289 - L1MB3 LINE L1 -34 6149 5399 2360 112 0 6 chr20 5419593 5419907 -66733975 - AluSx SINE Alu 0 312 1 4156 170 47 49 chr20 5419907 5419935 -66733947 - L1MB3 LINE L1 -784 5399 5372 1901 174 10 3 chr20 5419935 5420245 -66733637 + AluJb SINE Alu 1 312 0 4156 170 47 49 chr20 5420245 5420270 -66733612 - L1MB3 LINE L1 -811 5372 5348 776 131 54 31 chr20 5420270 5420400 -66733482 - FLAM_A SINE Alu 0 133 1 4156 170 47 49 chr20 5420400 5420570 -66733312 - L1MB3 LINE L1 -835 5348 5155 2197 107 7 3 chr20 5420581 5420872 -66733010 + AluSg SINE Alu 1 292 -18 733 68 34 59 chr20 5420872 5420981 -66732901 - AluJo/FRAM SINE Alu -21 291 184 690 13 0 0 chr20 5420987 5421066 -66732816 + (TTTTC)n Simple_repeat Simple_repeat 2 80 0 981 185 0 0 chr20 5421068 5421225 -66732657 - AluJb SINE Alu -31 281 125 400 256 47 0 chr20 5421235 5421321 -66732561 + L1MC4 LINE L1 6614 6703 -1339 745 156 62 8 chr20 5421322 5421450 -66732432 - AluJb SINE Alu -176 136 2 281 79 0 0 chr20 5421476 5421514 -66732368 - MER4D LTR ERV1 -74 798 761 1454 209 38 3 chr20 5421523 5421862 -66732020 - L1M4 LINE L1 -950 5196 4846 441 36 0 0 chr20 5421864 5421919 -66731963 + (TCTCCC)n Simple_repeat Simple_repeat 1 55 0 5563 79 39 9 chr20 5421919 5422705 -66731177 + SVA Other Other 57 866 -520 6765 66 34 28 chr20 5422720 5423672 -66730210 + SVA Other Other 430 1386 0 938 204 0 0 chr20 5423684 5423870 -66730012 - L1M4 LINE L1 -1287 4859 4674 2284 131 0 0 chr20 5424119 5424431 -66729451 + AluSx SINE Alu 1 312 0 2125 102 3 31 chr20 5424668 5424993 -66728889 + AluSp SINE Alu 1 317 0 727 183 21 14 chr20 5425185 5425327 -66728555 + FRAM SINE Alu 26 168 -8 831 254 26 29 chr20 5425577 5425849 -66728033 + LTR16C LTR ERVL 213 483 -8 356 234 39 39 chr20 5425859 5425941 -66727941 - L1MC4a LINE L1 -1902 5906 5822 2117 136 3 0 chr20 5425941 5426235 -66727647 - AluJb SINE Alu -4 308 14 356 234 39 39 chr20 5426235 5426280 -66727602 - L1MC4a LINE L1 -1985 5823 5779 215 225 0 0 chr20 5426532 5426572 -66727310 + CT-rich Low_complexity Low_complexity 4 43 0 300 231 0 44 chr20 5426653 5426744 -66727138 + Charlie8 DNA MER1_type 64 150 -2267 2079 98 0 52 chr20 5426788 5427094 -66726788 + AluSq SINE Alu 1 290 -23 2179 121 0 13 chr20 5427314 5427482 -66726400 - AluSx SINE Alu -11 301 137 2429 91 0 13 chr20 5427482 5427789 -66726093 - AluSx SINE Alu -9 303 1 2179 121 0 13 chr20 5427789 5427925 -66725957 - AluSx SINE Alu -175 137 1 711 207 0 0 chr20 5427968 5428089 -66725793 + FRAM SINE Alu 25 145 -31 1383 85 0 0 chr20 5428090 5428254 -66725628 - AluSp SINE Alu -14 299 136 201 147 0 0 chr20 5428267 5428301 -66725581 + (CAA)n Simple_repeat Simple_repeat 2 35 0 622 167 28 0 chr20 5428301 5428409 -66725473 - MER5A DNA MER1_type -75 114 4 253 118 0 0 chr20 5428784 5428818 -66725064 - MIR SINE MIR -150 112 79 1297 165 180 19 chr20 5428985 5429099 -66724783 + AluJo SINE Alu 1 95 -217 2256 136 0 0 chr20 5429099 5429408 -66724474 + AluSx SINE Alu 1 309 -3 1297 165 180 19 chr20 5429408 5429560 -66724322 + AluJo SINE Alu 95 310 -2 2257 115 0 0 chr20 5430009 5430305 -66723577 - AluSx SINE Alu -16 296 1 1652 188 20 3 chr20 5430314 5430606 -66723276 - AluJo SINE Alu -15 297 1 1626 180 6 60 chr20 5430618 5430934 -66722948 - AluJb SINE Alu -13 299 1 2284 107 10 13 chr20 5430970 5431279 -66722603 - AluSc SINE Alu 0 309 2 839 258 80 103 chr20 5431497 5431573 -66722309 + L1ME2 LINE L1 3375 3451 -2695 1664 93 14 0 chr20 5431573 5431789 -66722093 + AluSq SINE Alu 1 219 -94 839 258 80 103 chr20 5431789 5432197 -66721685 + L1ME2 LINE L1 3451 3848 -2298 673 86 0 32 chr20 5432201 5432294 -66721588 + AluSg/x SINE Alu 157 246 -63 1228 157 32 9 chr20 5432295 5432328 -66721554 + AluSg/x SINE Alu 83 114 -196 222 37 0 0 chr20 5432328 5432355 -66721527 + (TAAAA)n Simple_repeat Simple_repeat 2 28 0 1228 157 32 9 chr20 5432355 5432537 -66721345 + AluSg/x SINE Alu 114 303 -7 2274 113 7 0 chr20 5432541 5432851 -66721031 + AluSq SINE Alu 1 312 -1 408 73 0 0 chr20 5432852 5432920 -66720962 + AluSp/q SINE Alu 246 313 0 402 267 26 35 chr20 5432922 5433038 -66720844 + L1ME2 LINE L1 5152 5266 -880 180 0 0 0 chr20 5433046 5433066 -66720816 + (TTA)n Simple_repeat Simple_repeat 2 21 0 2340 94 17 0 chr20 5433095 5433392 -66720490 + AluSq SINE Alu 1 302 -11 252 267 88 13 chr20 5433418 5433620 -66720262 + L1ME2 LINE L1 5272 5485 -677 1952 147 0 66 chr20 5433646 5433779 -66720103 + AluJb SINE Alu 1 141 -171 1923 134 14 3 chr20 5433779 5434070 -66719812 - AluSx SINE Alu -17 295 2 1952 147 0 66 chr20 5434070 5434269 -66719613 + AluJb SINE Alu 141 311 -1 278 231 39 0 chr20 5434277 5434355 -66719527 - MLT1L LTR MaLR -13 602 522 825 205 12 6 chr20 5434361 5434527 -66719355 + AluJb SINE Alu 137 303 -9 644 303 59 28 chr20 5434996 5435048 -66718834 + L1ME2 LINE L1 5482 5531 -633 1995 148 10 3 chr20 5435048 5435346 -66718536 + AluJb SINE Alu 6 305 -7 849 119 0 37 chr20 5435350 5435484 -66718398 + FLAM_C SINE Alu 1 129 -4 644 303 59 28 chr20 5435484 5435881 -66718001 + L1ME2 LINE L1 5533 5931 -233 2061 142 3 3 chr20 5436059 5436362 -66717520 + AluSx SINE Alu 1 303 -9 488 253 177 0 chr20 5436517 5436675 -66717207 - MER5A DNA MER1_type 0 189 4 1672 65 28 0 chr20 5436938 5437153 -66716729 - AluSg/x SINE Alu -8 304 84 2435 75 6 40 chr20 5437248 5437570 -66716312 - AluSq SINE Alu -2 311 1 1086 98 0 0 chr20 5437573 5437705 -66716177 - AluSp SINE Alu -181 132 1 1899 166 13 0 chr20 5437804 5438105 -66715777 - AluJb SINE Alu -7 305 1 1777 174 13 23 chr20 5438630 5438934 -66714948 - AluJb SINE Alu -11 301 1 586 274 208 0 chr20 5439023 5439235 -66714647 + MIR SINE MIR 4 259 -3 457 279 104 13 chr20 5439240 5439394 -66714488 + MER5B DNA MER1_type 9 176 -2 2003 136 3 32 chr20 5439433 5439743 -66714139 - AluSq SINE Alu -12 301 1 2229 101 28 0 chr20 5440128 5440415 -66713467 + AluSg1 SINE Alu 1 295 -14 2298 93 0 7 chr20 5440436 5440736 -66713146 + AluSx SINE Alu 1 298 -14 3033 187 45 77 chr20 5440886 5441501 -66712381 + L1 LINE L1 3842 4424 -1722 2192 108 3 0 chr20 5441501 5441806 -66712076 + AluSp SINE Alu 1 306 -7 3033 187 45 77 chr20 5441806 5442033 -66711849 + L1 LINE L1 4424 4657 -1489 1083 107 0 47 chr20 5442208 5442377 -66711505 - AluSg/x SINE Alu -18 294 134 2010 94 40 0 chr20 5442377 5442652 -66711230 - AluSq SINE Alu -14 299 14 24 0 0 0 chr20 5442723 5442747 -66711135 + AT_rich Low_complexity Low_complexity 1 24 0 321 156 0 31 chr20 5442750 5442814 -66711068 - FRAM SINE Alu -67 99 38 387 220 2 2 chr20 5442818 5442895 -66710987 + AluJ/FLAM SINE Alu 2 66 -236 738 165 0 24 chr20 5442896 5443023 -66710859 + AluJo/FRAM SINE Alu 164 287 -25 389 152 0 0 chr20 5443048 5443114 -66710768 + FAM SINE Alu 114 179 0 238 65 22 22 chr20 5443150 5443196 -66710686 + (TAAAAA)n Simple_repeat Simple_repeat 5 50 0 1677 147 28 3 chr20 5443233 5443518 -66710364 - AluSx SINE Alu -18 294 3 313 223 80 63 chr20 5443618 5443793 -66710089 - L1MC4a LINE L1 -1788 6020 5843 1721 134 11 0 chr20 5443835 5444104 -66709778 - AluSx SINE Alu -5 307 36 290 266 64 18 chr20 5444142 5444251 -66709631 - HAL1b LINE L1 -776 572 459 305 278 93 96 chr20 5444255 5444361 -66709521 - HAL1b LINE L1 -931 417 312 1610 133 28 0 chr20 5444361 5444609 -66709273 - AluSx SINE Alu -11 301 47 305 278 93 96 chr20 5444609 5444772 -66709110 - HAL1b LINE L1 -1036 312 149 270 222 62 25 chr20 5444834 5444915 -66708967 - MLT1J LTR MaLR -35 476 393 706 119 336 0 chr20 5445447 5445590 -66708292 - AluSg/x SINE Alu -1 311 121 567 97 0 21 chr20 5445606 5445699 -66708183 - Alu SINE Alu 0 311 221 303 53 0 0 chr20 5445701 5445739 -66708143 - AluSq SINE Alu -132 171 134 2087 120 0 0 chr20 5445739 5446098 -66707784 - AluSg SINE Alu 0 310 1 2041 125 17 0 chr20 5446114 5446409 -66707473 - AluSx SINE Alu -12 300 1 737 208 100 50 chr20 5446439 5446680 -66707202 + MER63C DNA MER1_type 263 515 -415 378 143 48 0 chr20 5446673 5446736 -66707146 - AluJ/FRAM SINE Alu -8 294 229 * 855 161 0 0 chr20 5446736 5446873 -66707009 + AluSp/q SINE Alu 161 297 -16 620 215 29 67 chr20 5446873 5446936 -66706946 - MER63C DNA MER1_type -729 201 137 1227 164 97 53 chr20 5446936 5447139 -66706743 + AluJb SINE Alu 1 223 -89 2106 81 3 55 chr20 5447139 5447447 -66706435 + AluSp SINE Alu 1 292 -21 1227 164 97 53 chr20 5447447 5447542 -66706340 + AluJb SINE Alu 223 312 0 620 215 29 67 chr20 5447542 5447687 -66706195 - MER63C DNA MER1_type -793 137 1 264 30 0 0 chr20 5447755 5447788 -66706094 + (TG)n Simple_repeat Simple_repeat 2 34 0 776 204 0 0 chr20 5447788 5447925 -66705957 - AluJb SINE Alu -12 300 164 1637 96 5 0 chr20 5447925 5448145 -66705737 - AluSg/x SINE Alu -26 286 66 419 208 127 58 chr20 5448181 5448354 -66705528 + L2 LINE L2 2533 2717 -597 863 171 7 0 chr20 5448357 5448503 -66705379 + FRAM SINE Alu 1 146 -30 3368 102 22 0 chr20 5448509 5448970 -66704912 + MER11B LTR ERVK 1 471 -765 1098 123 6 28 chr20 5449026 5449205 -66704677 + MLT1B LTR MaLR 1 175 -215 1331 164 0 17 chr20 5449210 5449442 -66704440 + AluJo SINE Alu 1 228 -84 2060 122 30 0 chr20 5449454 5449758 -66704124 + AluSq SINE Alu 1 313 0 1431 121 22 9 chr20 5449758 5449971 -66703911 + MLT1B LTR MaLR 172 390 0 249 178 0 0 chr20 5449975 5450020 -66703862 + L2 LINE L2 2744 2788 -526 1013 90 0 0 chr20 5450663 5450796 -66703086 + AluSq/x SINE Alu 1 133 -180 1386 145 37 0 chr20 5450801 5451015 -66702867 + AluSg/x SINE Alu 81 302 -8 1820 234 38 20 chr20 5451017 5451060 -66702822 + LTR16A1 LTR ERVL 1 42 -415 1951 133 24 87 chr20 5451060 5451379 -66702503 - MLT1B LTR MaLR 0 390 101 2341 80 0 0 chr20 5451379 5451690 -66702192 + AluY SINE Alu 1 311 0 1951 133 24 87 chr20 5451690 5451783 -66702099 - MLT1B LTR MaLR -289 101 4 1820 234 38 20 chr20 5451783 5452188 -66701694 + LTR16A1 LTR ERVL 42 457 0 381 179 0 0 chr20 5452188 5452255 -66701627 - AluJ/FRAM SINE Alu -3 299 233 372 306 10 97 chr20 5452255 5452335 -66701547 + L3 LINE CR1 664 749 -828 764 134 118 0 chr20 5452335 5452454 -66701428 + FLAM_C SINE Alu 1 133 0 372 306 10 97 chr20 5452454 5452569 -66701313 + L3 LINE CR1 749 842 -735 2014 103 21 4 chr20 5452574 5452877 -66701005 - AluSq SINE Alu 0 308 1 1980 134 7 0 chr20 5452978 5453269 -66700613 - AluSx SINE Alu -18 294 2 1005 162 0 57 chr20 5453705 5453933 -66699949 + AluJo SINE Alu 1 215 -97 330 210 12 0 chr20 5454061 5454142 -66699740 - MLT1I LTR MaLR -4 405 324 617 165 9 0 chr20 5454148 5454257 -66699625 - AluJb SINE Alu -1 311 202 1304 173 54 30 chr20 5454605 5454759 -66699123 - AluJo SINE Alu -10 302 153 2090 107 26 13 chr20 5454759 5455067 -66698815 - AluSx SINE Alu 0 312 1 1304 173 54 30 chr20 5455067 5455207 -66698675 - AluJo SINE Alu -159 153 1 615 270 86 51 chr20 5455269 5455328 -66698554 - L1ME3A LINE L1 -220 5950 5895 2101 135 0 0 chr20 5455328 5455632 -66698250 - AluSx SINE Alu -8 304 1 615 270 86 51 chr20 5455632 5456038 -66697844 - L1ME3A LINE L1 -275 5895 5447 542 200 11 0 chr20 5456243 5456338 -66697544 - MER117 DNA MER1_type -42 155 60 533 213 11 0 chr20 5456348 5456442 -66697440 + MER5A DNA MER1_type 9 103 -86 491 338 18 31 chr20 5456554 5456782 -66697100 + L3 LINE CR1 594 818 -759 2220 95 3 7 chr20 5456934 5457238 -66696644 + AluSq SINE Alu 1 303 -10 884 132 0 22 chr20 5457249 5457385 -66696497 + FLAM_C SINE Alu 1 133 0 1695 157 0 24 chr20 5457469 5457756 -66696126 + AluJb SINE Alu 1 280 -32 203 0 37 0 chr20 5457756 5457783 -66696099 + (TAAA)n Simple_repeat Simple_repeat 4 31 0 285 251 164 47 chr20 5457899 5458070 -66695812 + L3 LINE CR1 967 1157 -420 2139 119 0 3 chr20 5458273 5458584 -66695298 - AluSx SINE Alu -2 310 1 278 367 0 0 chr20 5458591 5458689 -66695193 + L3 LINE CR1 1254 1351 -226 432 282 60 45 chr20 5458735 5458979 -66694903 + L1M4 LINE L1 2783 3022 -3124 2118 119 0 3 chr20 5458979 5459282 -66694600 + AluSx SINE Alu 1 302 -10 2243 82 3 0 chr20 5459290 5459584 -66694298 + AluSp SINE Alu 1 295 -18 432 282 60 45 chr20 5459584 5459879 -66694003 + L1M4 LINE L1 3028 3339 -2807 853 149 0 8 chr20 5459884 5460018 -66693864 + FLAM_C SINE Alu 1 133 -10 241 188 0 0 chr20 5460035 5460083 -66693799 + L1M LINE L1 5346 5393 -787 212 264 58 97 chr20 5460084 5460133 -66693749 + L3 LINE CR1 1338 1387 -190 811 147 16 8 chr20 5460133 5460262 -66693620 + FLAM_C SINE Alu 2 131 -2 212 264 58 97 chr20 5460262 5460367 -66693515 + L3 LINE CR1 1387 1486 -91 2153 83 17 20 chr20 5461385 5461685 -66692197 + AluSx SINE Alu 3 301 -11 655 305 121 23 chr20 5461965 5462313 -66691569 - LTR16C LTR ERVL -1 490 109 450 0 0 0 chr20 5462406 5462456 -66691426 + (TA)n Simple_repeat Simple_repeat 2 51 0 2015 107 11 0 chr20 5462456 5462736 -66691146 - AluSg SINE Alu -27 283 1 1704 158 10 30 chr20 5462758 5463061 -66690821 - AluJb SINE Alu -15 297 1 534 193 39 180 chr20 5463134 5463323 -66690559 - MLT1J LTR MaLR -243 268 138 2043 138 29 35 chr20 5463323 5463699 -66690183 - THE1C LTR MaLR -1 374 1 534 193 39 180 chr20 5463699 5463820 -66690062 - MLT1J LTR MaLR -373 138 2 274 133 0 33 chr20 5464637 5464697 -66689185 + (TTCCC)n Simple_repeat Simple_repeat 1 58 0 1991 137 7 0 chr20 5464697 5465004 -66688878 - AluSx SINE Alu -2 310 2 728 264 127 75 chr20 5465008 5465473 -66688409 + MLT1H1 LTR MaLR 65 553 -2 720 209 16 0 chr20 5465765 5465894 -66687988 - AluJb SINE Alu -13 299 169 2259 80 7 0 chr20 5466338 5466640 -66687242 + AluSq SINE Alu 1 304 -9 1973 112 10 36 chr20 5466742 5467046 -66686836 - AluSx SINE Alu -16 296 1 1579 171 3 30 chr20 5467046 5467351 -66686531 - AluJo SINE Alu -15 297 1 2319 87 0 0 chr20 5467562 5467871 -66686011 + AluSx SINE Alu 1 309 -3 511 263 119 34 chr20 5467935 5468171 -66685711 - LTR16C LTR ERVL -3 488 233 480 188 10 20 chr20 5468714 5468815 -66685067 + MER34C LTR ERV1 37 136 -449 2368 144 37 0 chr20 5468837 5469220 -66684662 - MSTB LTR MaLR -29 397 1 758 225 81 101 chr20 5469220 5469651 -66684231 + MER34 LTR ERV1 100 521 -21 810 165 8 0 chr20 5469652 5469785 -66684097 + AluJo SINE Alu 1 134 -178 754 176 7 29 chr20 5469822 5469958 -66683924 - FLAM_C SINE Alu 0 133 1 2322 84 3 0 chr20 5470062 5470360 -66683522 - AluSp SINE Alu -14 299 1 2079 115 0 10 chr20 5470437 5470751 -66683131 + AluSx SINE Alu 1 311 -1 1585 144 8 19 chr20 5470853 5471117 -66682765 + AluJb SINE Alu 35 295 -17 2103 104 10 3 chr20 5471254 5471563 -66682319 + AluSx SINE Alu 1 311 -1 2279 102 0 0 chr20 5471669 5471973 -66681909 - AluSx SINE Alu -8 304 1 1881 137 0 7 chr20 5472019 5472328 -66681554 + AluJo SINE Alu 1 307 0 337 276 35 0 chr20 5472330 5472417 -66681465 - L2 LINE L2 -14 3299 3210 921 100 46 0 chr20 5472418 5472548 -66681334 + AluSq/x SINE Alu 1 136 -176 1885 144 3 0 chr20 5472549 5472840 -66681042 + AluSx SINE Alu 3 294 -18 279 311 61 30 chr20 5472840 5472972 -66680910 - L2 LINE L2 -94 3219 3084 999 169 0 45 chr20 5473146 5473324 -66680558 + MER45A DNA AcHobo 8 177 -1 641 248 64 5 chr20 5473468 5473764 -66680118 - MLT1I LTR MaLR 0 409 52 892 146 0 14 chr20 5473794 5473938 -66679944 - AluJb SINE Alu -23 289 148 433 244 87 74 chr20 5473964 5474150 -66679732 - L1M4 LINE L1 -1219 4927 4745 761 177 8 0 chr20 5474150 5474280 -66679602 - FLAM_A SINE Alu 0 133 3 433 244 87 74 chr20 5474280 5474483 -66679399 - L1M4 LINE L1 -1401 4745 4533 845 162 101 0 chr20 5474487 5474635 -66679247 - FRAM SINE Alu -3 163 1 1105 167 0 0 chr20 5474744 5474930 -66678952 - AluJb SINE Alu -6 306 121 337 327 137 24 chr20 5475052 5475220 -66678662 - L1M4 LINE L1 -1717 4429 4243 1653 138 98 0 chr20 5475559 5475835 -66678047 - AluSx SINE Alu -9 303 1 549 262 283 0 chr20 5475890 5476134 -66677748 + MER5C DNA MER1_type 11 323 -1 1950 105 38 42 chr20 5476857 5477170 -66676712 - AluSx SINE Alu 0 312 1 1138 165 0 0 chr20 5477228 5477416 -66676466 - AluJb SINE Alu -4 308 121 1993 128 0 7 chr20 5477441 5477739 -66676143 - AluSx SINE Alu -16 296 1 2281 94 0 0 chr20 5477915 5478223 -66675659 - AluSq SINE Alu -5 308 1 198 0 0 0 chr20 5478281 5478303 -66675579 + (T)n Simple_repeat Simple_repeat 1 22 0 446 115 52 62 chr20 5478303 5478399 -66675483 - LTR9 LTR ERV1 -86 526 432 356 186 0 35 chr20 5478425 5478511 -66675371 - L1M4 LINE L1 -2196 3950 3868 343 338 40 59 chr20 5478566 5478844 -66675038 - L1M4 LINE L1 -2368 3778 3496 2397 133 2 84 chr20 5478844 5479222 -66674660 - L1PA15 LINE L1 -2 6163 5756 2267 89 0 0 chr20 5479222 5479514 -66674368 - AluSg SINE Alu -15 295 4 2397 133 2 84 chr20 5479514 5479527 -66674355 - L1PA15 LINE L1 -409 5756 5810 2192 103 3 0 chr20 5479527 5479829 -66674053 - AluSx SINE Alu -9 303 1 2397 133 2 84 chr20 5479829 5479887 -66673995 - L1PA15 LINE L1 -354 5811 5750 343 338 40 59 chr20 5479887 5480022 -66673860 - L1M4 LINE L1 -2650 3496 3376 2175 117 10 0 chr20 5480272 5480581 -66673301 - AluSx SINE Alu 0 312 1 966 91 15 15 chr20 5481109 5481241 -66672641 + FLAM_C SINE Alu 2 133 0 2240 96 0 3 chr20 5481251 5481563 -66672319 + AluSx SINE Alu 1 311 -1 1027 190 0 0 chr20 5481688 5481862 -66672020 - AluJb SINE Alu -5 307 134 1703 179 3 0 chr20 5481862 5482169 -66671713 - AluJo SINE Alu -4 308 1 412 171 118 0 chr20 5482497 5482573 -66671309 - AluSg/x SINE Alu -19 291 207 198 0 0 0 chr20 5482692 5482714 -66671168 + (T)n Simple_repeat Simple_repeat 1 22 0 1214 131 0 0 chr20 5482813 5482988 -66670894 - AluSx SINE Alu -137 175 1 2293 93 0 0 chr20 5483022 5483324 -66670558 + AluSx SINE Alu 1 302 -10 405 133 0 17 chr20 5483488 5483548 -66670334 - AluJ/FLAM SINE Alu -249 63 5 1338 156 31 35 chr20 5483552 5483809 -66670073 - AluJo SINE Alu -56 256 1 258 178 0 0 chr20 5483928 5483973 -66669909 - L2 LINE L2 -605 2709 2665 2075 121 0 3 chr20 5484088 5484394 -66669488 + AluY SINE Alu 1 305 -6 1960 152 0 3 chr20 5484413 5484722 -66669160 + AluSx SINE Alu 1 308 -4 1700 96 69 4 chr20 5484749 5485031 -66668851 + AluSx SINE Alu 7 305 0 934 218 131 33 chr20 5485033 5485460 -66668422 + HAL1 LINE L1 1103 1571 -936 1059 281 67 17 chr20 5485530 5486006 -66667876 + HAL1 LINE L1 1958 2457 -50 1043 159 11 0 chr20 5486006 5486182 -66667700 - AluJo SINE Alu -22 290 113 2009 112 35 0 chr20 5486219 5486506 -66667376 - AluSp SINE Alu -16 297 1 479 177 0 13 chr20 5486526 5486605 -66667277 + MER2 DNA MER2_type 268 345 0 2380 161 53 95 chr20 5487379 5487431 -66666451 + L1 LINE L1 3827 3880 -2266 2263 74 10 0 chr20 5487431 5487728 -66666154 + AluSp SINE Alu 1 300 -13 2380 161 53 95 chr20 5487728 5488239 -66665643 + L1 LINE L1 3880 4411 -1735 1716 153 37 0 chr20 5488239 5488533 -66665349 - AluJb SINE Alu -4 308 4 1897 130 3 7 chr20 5488534 5488833 -66665049 - AluSx SINE Alu -14 298 1 2380 161 53 95 chr20 5488833 5488910 -66664972 + L1 LINE L1 4410 4443 -1703 2191 97 0 16 chr20 5488942 5489252 -66664630 - AluSg SINE Alu -5 305 1 1214 184 68 43 chr20 5489252 5489422 -66664460 - AluJo SINE Alu -15 287 106 2196 96 7 0 chr20 5489422 5489724 -66664158 + AluSg SINE Alu 1 304 -6 1214 184 68 43 chr20 5489724 5489831 -66664051 - AluJo SINE Alu -196 106 3 393 289 147 19 chr20 5490679 5490835 -66663047 - MER5A DNA MER1_type 0 189 14 439 200 78 17 chr20 5491266 5491381 -66662501 - MIR SINE MIR -24 238 117 187 237 303 0 chr20 5491823 5491899 -66661983 - L2 LINE L2 -5 3267 3169 334 280 49 21 chr20 5492267 5492410 -66661472 + L3 LINE CR1 1112 1258 -319 1947 97 100 0 chr20 5492626 5492905 -66660977 - AluSx SINE Alu -5 307 1 2313 92 13 0 chr20 5492965 5493270 -66660612 - AluSp SINE Alu -4 309 1 636 124 0 0 chr20 5493382 5493471 -66660411 - 5S rRNA rRNA -31 90 2 201 345 26 9 chr20 5493471 5493584 -66660298 + L3 LINE CR1 1284 1398 -179 832 218 0 0 chr20 5494040 5494257 -66659625 + FRAM SINE Alu 1 81 0 732 237 167 31 chr20 5494455 5494742 -66659140 + L2 LINE L2 2135 2460 -854 23 33 0 0 chr20 5495382 5495412 -66658470 + AT_rich Low_complexity Low_complexity 1 30 0 230 210 24 99 chr20 5496251 5496384 -66657498 - L1M3 LINE L1 -367 5813 5689 1805 176 3 25 chr20 5496404 5496723 -66657159 - AluJo SINE Alu 0 312 1 2427 181 25 23 chr20 5497257 5497404 -66656478 + L1MA3 LINE L1 3423 3568 -2578 1857 171 7 0 chr20 5497404 5497708 -66656174 + AluJb SINE Alu 1 306 -6 2427 181 25 23 chr20 5497708 5498078 -66655804 + L1MA3 LINE L1 3568 3941 -2205 1308 127 97 158 chr20 5498079 5498179 -66655703 + AluJb SINE Alu 3 107 -205 1531 184 0 8 chr20 5498179 5498429 -66655453 + AluJo SINE Alu 5 252 -60 1308 127 97 158 chr20 5498429 5498658 -66655224 + AluJb SINE Alu 107 312 0 5884 104 73 64 chr20 5498662 5499237 -66654645 + L1MA3 LINE L1 4873 5441 -864 882 93 0 0 chr20 5499237 5499355 -66654527 - FLAM_C SINE Alu -15 118 1 5884 104 73 64 chr20 5499355 5499998 -66653884 + L1MA3 LINE L1 5441 6076 -229 1864 153 0 3 chr20 5499998 5500286 -66653596 + AluSx SINE Alu 1 287 -25 5884 104 73 64 chr20 5500286 5500342 -66653540 + L1MA3 LINE L1 6076 6130 -175 1453 124 200 0 chr20 5500342 5500592 -66653290 + AluSg SINE Alu 1 300 0 5884 104 73 64 chr20 5500592 5500745 -66653137 + L1MA3 LINE L1 6130 6305 0 1577 133 53 93 chr20 5500752 5501054 -66652828 + AluJb SINE Alu 1 290 -22 414 39 0 0 chr20 5501070 5501122 -66652760 + (CA)n Simple_repeat Simple_repeat 2 53 0 2314 99 0 10 chr20 5501390 5501702 -66652180 - AluSq SINE Alu -4 309 1 1967 149 0 7 chr20 5501714 5502003 -66651879 - AluJo SINE Alu -25 287 1 1846 137 4 0 chr20 5502029 5502299 -66651583 + AluJb SINE Alu 15 285 -27 1209 195 0 0 chr20 5502630 5502825 -66651057 + AluJb SINE Alu 104 298 -14 1948 137 3 7 chr20 5502825 5503131 -66650751 + AluSx SINE Alu 1 305 0 2336 103 3 0 chr20 5503133 5503443 -66650439 + AluSp SINE Alu 1 311 -2 187 303 30 40 chr20 5504765 5504864 -66649018 - MIR3 SINE MIR -105 103 6 1378 152 0 25 chr20 5505037 5505281 -66648601 - AluSg/x SINE Alu 0 312 75 1995 131 28 0 chr20 5505283 5505574 -66648308 - AluSx SINE Alu -13 299 1 2182 133 0 0 chr20 5505895 5506195 -66647687 + AluSx SINE Alu 1 300 -12 2330 113 0 0 chr20 5506324 5506634 -66647248 + AluSg SINE Alu 1 310 0 2268 97 3 6 chr20 5506833 5507144 -66646738 - AluSg SINE Alu 0 310 1 418 254 56 0 chr20 5508699 5508825 -66645057 - L1ME1 LINE L1 -52 6114 5982 532 157 12 0 chr20 5509001 5509084 -66644798 - HY4 scRNA scRNA -9 84 1 2099 111 21 17 chr20 5509089 5509377 -66644505 - AluSx SINE Alu -22 290 2 1269 195 99 64 chr20 5510664 5511151 -66642731 + L1MC5 LINE L1 6971 7474 -487 1060 166 11 6 chr20 5511184 5511359 -66642523 + FRAM SINE Alu 1 176 0 232 252 81 41 chr20 5511505 5511628 -66642254 - MIR SINE MIR -3 259 132 1403 143 0 0 chr20 5511655 5511858 -66642024 - AluSg/x SINE Alu -14 296 94 212 297 27 36 chr20 5511971 5512082 -66641800 + MIR SINE MIR 84 193 -69 1099 184 20 33 chr20 5513301 5513546 -66640336 + AluJo SINE Alu 55 296 -16 449 134 24 0 chr20 5514169 5514251 -66639631 + FLAM_A SINE Alu 44 127 -15 2160 84 0 53 chr20 5515800 5516123 -66637759 - AluSx SINE Alu 0 307 1 275 297 66 0 chr20 5516288 5516379 -66637503 - L1MEd LINE L1 -4895 1224 1128 207 100 0 0 chr20 5516379 5516409 -66637473 + (T)n Simple_repeat Simple_repeat 1 30 0 1270 162 160 46 chr20 5516560 5516625 -66637257 - HsTC2 DNA Tc2 -15 1883 1827 1586 187 17 7 chr20 5516625 5516925 -66636957 - AluJo SINE Alu -9 303 1 1270 162 160 46 chr20 5516925 5516970 -66636912 - HsTC2 DNA Tc2 -71 1827 1789 2407 110 0 0 chr20 5516970 5517280 -66636602 - AluSx SINE Alu 0 312 3 1270 162 160 46 chr20 5517280 5517562 -66636320 - HsTC2 DNA Tc2 -109 1789 1269 1194 234 45 6 chr20 5517559 5517871 -66636011 - HsTC2 DNA Tc2 -1385 513 190 * 330 273 186 51 chr20 5517996 5518230 -66635652 - L2 LINE L2 -255 3058 2793 2347 96 0 0 chr20 5518417 5518710 -66635172 + AluSx SINE Alu 5 297 -15 328 236 64 9 chr20 5518904 5519014 -66634868 - MLT1K LTR MaLR 0 588 473 724 296 58 10 chr20 5519038 5519329 -66634553 + L1ME LINE L1 5378 5682 -439 2211 96 30 3 chr20 5519354 5519657 -66634225 + AluSq SINE Alu 1 311 -2 1064 182 0 6 chr20 5520060 5520236 -66633646 + AluJo SINE Alu 4 178 -134 952 123 0 0 chr20 5520341 5520471 -66633411 + FLAM_C SINE Alu 2 131 -2 35 63 0 0 chr20 5520471 5520534 -66633348 + AT_rich Low_complexity Low_complexity 1 63 0 272 267 40 10 chr20 5520706 5520807 -66633075 + MIR SINE MIR 2 105 -157 1822 68 124 8 chr20 5520952 5521201 -66632681 + AluSg SINE Alu 1 278 -32 267 31 0 0 chr20 5521204 5521236 -66632646 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 241 277 0 48 chr20 5521288 5521371 -66632511 + MIR SINE MIR 176 254 -8 203 240 20 0 chr20 5521703 5521753 -66632129 + (CCCCG)n Simple_repeat Simple_repeat 4 54 0 27 29 0 0 chr20 5521973 5522007 -66631875 + GC_rich Low_complexity Low_complexity 1 34 0 357 287 74 8 chr20 5523099 5523221 -66630661 + Charlie8 DNA MER1_type 93 222 -2195 558 141 0 0 chr20 5523499 5523584 -66630298 + FLAM_A SINE Alu 1 85 -57 2197 107 0 26 chr20 5524275 5524444 -66629438 - AluSg SINE Alu -10 300 141 2144 121 7 0 chr20 5524444 5524741 -66629141 - AluSp SINE Alu -13 300 2 2197 107 0 26 chr20 5524741 5524879 -66629003 - AluSg SINE Alu -169 141 1 2284 91 0 7 chr20 5524957 5525275 -66628607 - AluSq SINE Alu 0 316 1 2266 75 3 36 chr20 5525495 5525802 -66628080 + AluSp SINE Alu 1 297 -16 2573 53 0 7 chr20 5525810 5526112 -66627770 + AluY SINE Alu 1 300 -11 387 319 65 23 chr20 5526689 5526905 -66626977 + MIR SINE MIR 11 235 -27 2171 129 0 0 chr20 5527103 5527398 -66626484 - AluSx SINE Alu -17 295 1 2079 71 27 37 chr20 5527891 5528187 -66625695 + AluY SINE Alu 1 293 -18 979 180 0 6 chr20 5528257 5528418 -66625464 - AluJo SINE Alu -17 295 136 223 333 0 0 chr20 5528426 5528504 -66625378 - MIR SINE MIR -64 144 67 2228 95 10 3 chr20 5528530 5528825 -66625057 - AluSp SINE Alu -16 297 1 2375 112 0 0 chr20 5529509 5529821 -66624061 - AluSq SINE Alu -1 312 1 22 0 0 0 chr20 5530084 5530106 -66623776 + AT_rich Low_complexity Low_complexity 1 22 0 636 130 104 9 chr20 5530112 5530227 -66623655 - AluJo SINE Alu -185 127 2 1914 169 32 9 chr20 5531786 5532129 -66621753 - L1PA15 LINE L1 -4 6161 5811 2217 112 3 0 chr20 5532249 5532543 -66621339 - AluSx SINE Alu -17 295 1 829 83 83 38 chr20 5532640 5532773 -66621109 + AluJo SINE Alu 112 250 -62 2384 86 3 0 chr20 5532796 5533097 -66620785 - AluY SINE Alu -9 302 1 848 153 15 0 chr20 5533119 5533250 -66620632 - FLAM_C SINE Alu 0 133 1 1254 135 13 26 chr20 5533250 5533468 -66620414 - L1 LINE L1 -1149 4997 4781 1966 136 0 0 chr20 5533489 5533762 -66620120 - AluSq SINE Alu -16 297 25 612 95 0 0 chr20 5533764 5533848 -66620034 + AluSp/q SINE Alu 176 259 -54 237 154 0 0 chr20 5533848 5533887 -66619995 + L1 LINE L1 4547 4585 -1561 1069 138 0 0 chr20 5533901 5534060 -66619822 + L1 LINE L1 4639 4797 -1349 1824 142 0 65 chr20 5534060 5534384 -66619498 + AluSx SINE Alu 1 303 -9 2673 150 20 16 chr20 5534384 5534800 -66619082 - L1 LINE L1 -1817 4329 3909 2215 103 0 10 chr20 5534800 5535102 -66618780 - AluSx SINE Alu -13 299 1 2673 150 20 16 chr20 5535102 5535173 -66618709 - L1 LINE L1 -2237 3909 3840 311 244 68 27 chr20 5535152 5535373 -66618509 - L1ME LINE L1 -295 5826 5555 * 260 213 33 0 chr20 5535533 5535594 -66618288 + MIR SINE MIR 114 176 -86 792 220 157 33 chr20 5535597 5535897 -66617985 + L1MC5 LINE L1 7044 7380 -581 2630 175 62 161 chr20 5535957 5536930 -66616952 + MER21A LTR ERV1 39 914 -17 604 162 8 43 chr20 5537041 5537158 -66616724 + FLAM_C SINE Alu 13 125 -18 2162 130 0 0 chr20 5537165 5537457 -66616425 + AluSx SINE Alu 1 292 -20 264 218 122 20 chr20 5537460 5537607 -66616275 + L1MC5 LINE L1 7520 7681 -280 1750 239 72 18 chr20 5537628 5537853 -66616029 + L1ME LINE L1 5103 5314 -856 1766 155 41 3 chr20 5537853 5538144 -66615738 - AluJo SINE Alu -10 302 1 1750 239 72 18 chr20 5538144 5538540 -66615342 + L1ME LINE L1 5314 5746 -424 530 87 0 0 chr20 5538538 5538607 -66615275 - L1M3 LINE L1 -463 5720 5652 * 413 431 3 122 chr20 5538627 5538753 -66615129 - AluSx SINE Alu 0 302 163 2081 149 0 0 chr20 5538753 5539061 -66614821 - AluSx SINE Alu 0 312 5 413 431 3 122 chr20 5539061 5539277 -66614605 - AluSx SINE Alu -139 163 1 2210 87 10 7 chr20 5539839 5540127 -66613755 - AluSx SINE Alu -23 289 1 23 0 0 0 chr20 5540685 5540708 -66613174 + AT_rich Low_complexity Low_complexity 1 23 0 278 256 37 12 chr20 5540767 5540849 -66613033 + L2 LINE L2 1365 1448 -1866 893 70 118 0 chr20 5541216 5541371 -66612511 + MER30 DNA MER1_type 1 195 -35 2039 91 91 3 chr20 5541463 5541749 -66612133 + AluY SINE Alu 1 311 0 416 317 53 18 chr20 5542422 5542649 -66611233 - L1ME LINE L1 -511 5659 5425 1163 173 61 78 chr20 5542710 5542751 -66611131 - L1ME LINE L1 -429 5737 5697 1677 184 0 33 chr20 5542751 5543055 -66610827 + AluJo SINE Alu 1 294 -18 1766 167 27 0 chr20 5543065 5543358 -66610524 + AluJb SINE Alu 11 311 -1 1163 173 61 78 chr20 5543358 5543600 -66610282 - L1ME LINE L1 -478 5688 5448 2330 92 3 29 chr20 5543610 5543916 -66609966 - AluSp SINE Alu -15 298 1 1015 128 0 0 chr20 5544117 5544258 -66609624 + AluJb SINE Alu 1 141 -171 2416 90 0 0 chr20 5544926 5545226 -66608656 - AluSx SINE Alu -12 300 1 219 69 0 0 chr20 5545233 5545262 -66608620 + (T)n Simple_repeat Simple_repeat 1 29 0 1375 195 17 31 chr20 5545380 5545672 -66608210 - AluJo SINE Alu -24 288 1 2526 84 3 0 chr20 5545738 5546047 -66607835 + AluSp SINE Alu 1 310 -3 439 223 46 23 chr20 5546061 5546194 -66607688 - MLT1J LTR MaLR -292 158 55 1659 178 7 7 chr20 5547051 5547338 -66606544 - AluJb SINE Alu -25 287 1 378 0 0 0 chr20 5547446 5547488 -66606394 + (TG)n Simple_repeat Simple_repeat 2 43 0 1335 199 27 40 chr20 5547571 5547872 -66606010 - AluJo SINE Alu -11 301 5 2348 98 0 9 chr20 5548116 5548431 -66605451 - AluSx SINE Alu 0 312 1 2055 153 7 0 chr20 5548931 5549239 -66604643 - AluSx SINE Alu -2 310 1 22 56 0 0 chr20 5549486 5549522 -66604360 + AT_rich Low_complexity Low_complexity 1 36 0 2127 124 0 0 chr20 5549522 5549820 -66604062 - AluSc SINE Alu -11 298 1 2228 99 21 0 chr20 5549820 5550103 -66603779 - AluSg SINE Alu -21 289 1 494 293 82 37 chr20 5550330 5550685 -66603197 - HAL1b LINE L1 -774 574 204 2331 110 3 3 chr20 5550714 5551024 -66602858 - AluSx SINE Alu -2 310 1 1115 214 53 29 chr20 5551035 5551316 -66602566 - L1MB7 LINE L1 0 6184 5897 350 298 6 6 chr20 5553066 5553224 -66600658 + (TG)n Simple_repeat Simple_repeat 1 158 0 2268 114 0 7 chr20 5553534 5553842 -66600040 - AluSx SINE Alu -6 306 1 361 204 83 0 chr20 5555174 5555263 -66598619 + MIR SINE MIR 95 191 -60 21 0 0 0 chr20 5555856 5555877 -66598005 + AT_rich Low_complexity Low_complexity 1 21 0 450 296 23 0 chr20 5557122 5557254 -66596628 + MER112 DNA MER1_type 115 249 -11 1602 146 103 0 chr20 5557262 5557552 -66596330 + AluJo SINE Alu 1 317 0 2353 97 0 0 chr20 5558309 5558608 -66595274 + AluSg1 SINE Alu 1 299 -10 622 228 123 78 chr20 5558730 5559143 -66594739 - L1ME3 LINE L1 -59 6103 5672 1886 163 0 23 chr20 5559154 5559460 -66594422 - AluJb SINE Alu -13 299 1 676 162 103 0 chr20 5559784 5559901 -66593981 - FLAM_C SINE Alu -13 130 2 189 0 0 0 chr20 5560450 5560471 -66593411 + (T)n Simple_repeat Simple_repeat 1 21 0 183 196 294 0 chr20 5560504 5560555 -66593327 + MER5B DNA MER1_type 2 67 -111 386 122 0 144 chr20 5561060 5561126 -66592756 - L1MB1 LINE L1 0 6168 6136 1993 129 4 0 chr20 5561126 5561405 -66592477 - AluSx SINE Alu -12 300 21 386 122 0 144 chr20 5561405 5561444 -66592438 - L1MB1 LINE L1 -32 6136 6093 760 171 0 79 chr20 5561451 5561603 -66592279 - AluJo SINE Alu -171 141 2 1199 150 34 49 chr20 5561607 5561677 -66592205 - L1MB1 LINE L1 -68 6100 6030 2201 119 0 0 chr20 5561677 5561971 -66591911 - AluSx SINE Alu -17 295 2 1199 150 34 49 chr20 5561971 5562162 -66591720 - L1MB1 LINE L1 -138 6030 5837 1705 173 14 7 chr20 5562527 5562811 -66591071 - AluJb SINE Alu -26 286 1 369 336 43 26 chr20 5562862 5563094 -66590788 - L1M4 LINE L1 -1539 4607 4372 441 210 134 8 chr20 5563129 5563248 -66590634 - MER58C DNA MER1_type -38 177 44 761 177 39 0 chr20 5563755 5563885 -66589997 - AluJo SINE Alu -176 136 2 2192 69 62 14 chr20 5564221 5564511 -66589371 + AluSp SINE Alu 1 304 -9 1967 134 46 0 chr20 5564531 5564815 -66589067 + AluJb SINE Alu 4 300 -12 307 261 23 0 chr20 5565172 5565260 -66588622 + MIR SINE MIR 52 141 -121 809 141 0 16 chr20 5566259 5566387 -66587495 + FLAM_A SINE Alu 1 126 -7 2514 48 0 26 chr20 5567016 5567329 -66586553 - AluY SINE Alu -6 305 1 2600 69 0 0 chr20 5567634 5567940 -66585942 - AluY SINE Alu -5 306 1 2271 98 3 3 chr20 5567970 5568266 -66585616 - AluSq SINE Alu -17 296 1 962 200 118 0 chr20 5568449 5568644 -66585238 - MER20 DNA MER1_type -1 218 1 1995 114 0 89 chr20 5569198 5569523 -66584359 - AluSx SINE Alu -15 297 2 804 201 106 0 chr20 5569633 5569822 -66584060 - MER3 DNA MER1_type 0 209 1 1788 175 0 38 chr20 5571049 5571369 -66582513 - AluJb SINE Alu -2 310 3 1369 179 0 36 chr20 5571495 5571746 -66582136 - AluJo SINE Alu -24 288 47 228 67 0 0 chr20 5571750 5571780 -66582102 + (T)n Simple_repeat Simple_repeat 1 30 0 36 77 0 0 chr20 5571793 5571871 -66582011 + AT_rich Low_complexity Low_complexity 1 78 0 465 262 87 0 chr20 5571871 5571997 -66581885 - FRAM SINE Alu -31 145 9 2285 97 7 0 chr20 5572019 5572309 -66581573 - AluSx SINE Alu -20 292 1 1865 147 3 46 chr20 5573550 5573876 -66580006 - AluJb SINE Alu 0 312 1 1635 190 0 7 chr20 5574505 5574794 -66579088 + AluJo SINE Alu 1 287 -25 625 221 59 0 chr20 5575595 5575731 -66578151 - MER3 DNA MER1_type 0 209 66 225 65 0 0 chr20 5576314 5576345 -66577537 + (A)n Simple_repeat Simple_repeat 1 31 0 262 279 69 48 chr20 5577316 5577535 -66576347 - L2 LINE L2 0 3272 3042 476 273 106 48 chr20 5577572 5577648 -66576234 - L2 LINE L2 -34 3279 3209 1599 173 34 20 chr20 5577648 5577943 -66575939 - AluJo SINE Alu -13 299 1 476 273 106 48 chr20 5577943 5578177 -66575705 - L2 LINE L2 -104 3209 2951 318 26 0 0 chr20 5579564 5579603 -66574279 + (TCCC)n Simple_repeat Simple_repeat 4 42 0 884 122 0 0 chr20 5579606 5579721 -66574161 - FLAM_C SINE Alu -28 115 1 21 36 0 0 chr20 5579725 5579753 -66574129 + AT_rich Low_complexity Low_complexity 1 28 0 180 0 0 0 chr20 5579982 5580002 -66573880 + (TG)n Simple_repeat Simple_repeat 1 20 0 1981 125 10 17 chr20 5580003 5580300 -66573582 - AluSx SINE Alu -17 295 1 1886 147 32 38 chr20 5581223 5581536 -66572346 - AluJb SINE Alu -1 311 1 1191 280 70 51 chr20 5582148 5582590 -66571292 - L1MC4a LINE L1 -1921 5887 5432 2219 94 0 0 chr20 5582590 5582867 -66571015 - AluSx SINE Alu -35 277 1 1191 280 70 51 chr20 5582867 5582949 -66570933 - L1MC4a LINE L1 -2376 5432 5353 1690 140 142 11 chr20 5585859 5586177 -66567705 - MER47A DNA MER2_type 0 366 4 639 182 84 28 chr20 5586287 5586430 -66567452 - L1MB5 LINE L1 0 6174 6024 2318 113 0 0 chr20 5586869 5587180 -66566702 - AluSx SINE Alu -1 311 1 283 255 172 25 chr20 5587351 5587508 -66566374 - L1ME4a LINE L1 -1 6120 5941 463 295 82 75 chr20 5587759 5587804 -66566078 - L1MC4a LINE L1 -298 5823 5780 1512 157 98 0 chr20 5587804 5588085 -66565797 - AluSx SINE Alu 0 308 3 463 295 82 75 chr20 5588085 5588656 -66565226 - L1MC4a LINE L1 -341 5780 5257 2328 105 0 10 chr20 5588919 5589255 -66564627 + AluSx SINE Alu 1 312 0 318 236 90 28 chr20 5589255 5589390 -66564492 - L1ME4a LINE L1 -387 5734 5588 189 0 0 0 chr20 5590157 5590178 -66563704 + (T)n Simple_repeat Simple_repeat 1 21 0 385 281 168 0 chr20 5590261 5590464 -66563418 + MIR SINE MIR 13 249 -13 1642 171 25 29 chr20 5590703 5591017 -66562865 + AluJo SINE Alu 3 315 0 2053 136 0 16 chr20 5592110 5592418 -66561464 + AluSx SINE Alu 1 303 -9 2074 138 0 13 chr20 5592451 5592755 -66561127 - AluSx SINE Alu -12 300 1 1972 132 10 10 chr20 5592992 5593281 -66560601 + AluSx SINE Alu 3 291 -21 991 146 73 26 chr20 5593490 5593682 -66560200 + MER46A DNA MER2_type 14 214 -22 846 179 72 175 chr20 5593731 5593908 -66559974 - L1MC4 LINE L1 -76 7966 7772 1818 138 10 21 chr20 5593908 5594199 -66559683 - AluSx SINE Alu -24 288 1 846 179 72 175 chr20 5594199 5594552 -66559330 - L1MC4 LINE L1 -270 7772 7491 286 226 71 0 chr20 5594530 5594614 -66559268 - L1ME4a LINE L1 -2371 5437 5348 * 351 257 154 78 chr20 5594883 5595430 -66558452 - L1M2 LINE L1 -1131 2078 1757 276 263 93 57 chr20 5595447 5595641 -66558241 - HAL1 LINE L1 -1688 819 619 1893 106 48 27 chr20 5596199 5596492 -66557390 - AluSx SINE Alu -3 309 11 1483 185 21 11 chr20 5596503 5596790 -66557092 - AluJo SINE Alu -22 290 1 684 273 114 0 chr20 5596933 5597109 -66556773 + MER58A DNA MER1_type 24 219 -5 2064 128 20 0 chr20 5597710 5598008 -66555874 - AluSx SINE Alu -8 304 1 2367 197 108 43 chr20 5598288 5598716 -66555166 - MER77 LTR ERV1 -4 601 126 656 188 8 0 chr20 5598716 5598833 -66555049 - FLAM_C SINE Alu -15 118 1 2367 197 108 43 chr20 5598833 5598968 -66554914 - MER77 LTR ERV1 -479 126 1 1725 162 28 0 chr20 5600542 5600826 -66553056 + AluJb SINE Alu 1 292 -20 335 298 118 32 chr20 5602202 5602548 -66551334 + L1M4 LINE L1 3582 3957 -2189 1626 170 6 19 chr20 5602674 5602991 -66550891 + AluSq SINE Alu 1 313 0 208 139 0 28 chr20 5604194 5604230 -66549652 + (TCTCC)n Simple_repeat Simple_repeat 4 38 0 193 167 185 19 chr20 5607196 5607250 -66546632 + MIR SINE MIR 85 147 -61 195 42 0 0 chr20 5608576 5608600 -66545282 + (TCTCCC)n Simple_repeat Simple_repeat 5 28 0 234 245 115 108 chr20 5609442 5609481 -66544401 - L1MC4 LINE L1 -139 7903 7866 1896 133 3 3 chr20 5609481 5609775 -66544107 + AluJo SINE Alu 1 294 -18 234 245 115 108 chr20 5609775 5610021 -66543861 - L1MC4 LINE L1 -176 7866 7616 1715 89 4 4 chr20 5610359 5610595 -66543287 + AluSq SINE Alu 1 236 -77 234 286 155 43 chr20 5610666 5610792 -66543090 + MIR SINE MIR 24 173 -89 1803 143 0 14 chr20 5610792 5611086 -66542796 + AluJo SINE Alu 1 290 -22 234 286 155 43 chr20 5611086 5611120 -66542762 + MIR SINE MIR 173 202 -60 346 291 42 4 chr20 5611938 5612065 -66541817 - L1ME1 LINE L1 -2 6332 6046 207 0 0 0 chr20 5612097 5612120 -66541762 + (TGGA)n Simple_repeat Simple_repeat 3 25 0 2027 115 3 3 chr20 5612179 5612475 -66541407 - AluSx SINE Alu -16 296 1 234 282 76 46 chr20 5613874 5614005 -66539877 + MER5A DNA MER1_type 33 167 -22 258 339 9 9 chr20 5614087 5614196 -66539686 - L2 LINE L2 -214 3058 2950 780 245 65 0 chr20 5614473 5614673 -66539209 - MER58A DNA MER1_type -11 213 1 420 301 133 10 chr20 5620048 5620244 -66533638 - MIR SINE MIR 0 262 43 306 193 18 0 chr20 5620392 5620449 -66533433 - U13 snRNA snRNA -28 76 19 2194 96 7 0 chr20 5620458 5620751 -66533131 - AluSx SINE Alu -17 295 1 419 303 168 32 chr20 5621419 5621974 -66531908 + L2 LINE L2 2087 2716 -598 473 280 122 19 chr20 5621987 5622355 -66531527 - HAL1 LINE L1 -1054 1453 1048 281 252 59 42 chr20 5622355 5622474 -66531408 + L2 LINE L2 3151 3271 -1 839 152 0 33 chr20 5623140 5623291 -66530591 - FRAM SINE Alu -10 166 21 2225 91 3 7 chr20 5623412 5623721 -66530161 - AluSq SINE Alu -5 308 1 328 304 6 88 chr20 5623757 5623928 -66529954 + L1M4 LINE L1 4031 4187 -1959 482 288 183 38 chr20 5623959 5624358 -66529524 + L1M4 LINE L1 4736 5192 -954 1881 145 3 0 chr20 5624367 5624650 -66529232 + AluSx SINE Alu 8 291 -21 248 154 0 39 chr20 5625053 5625105 -66528777 - L1MC5 LINE L1 -48 7913 7864 327 269 103 77 chr20 5625326 5625560 -66528322 - L1MC4a LINE L1 -1879 5929 5690 225 0 0 0 chr20 5625654 5625679 -66528203 + (TTTA)n Simple_repeat Simple_repeat 4 28 0 1290 20 0 0 chr20 5625680 5625826 -66528056 - L1PA5 LINE L1 -9 6145 6000 233 175 48 79 chr20 5626055 5626181 -66527701 + L1ME4a LINE L1 5982 6103 -18 267 301 237 3 chr20 5627327 5627542 -66526340 + MIR SINE MIR 5 262 0 348 318 98 28 chr20 5627583 5627838 -66526044 - L1ME4a LINE L1 -2 6119 5847 2026 93 10 3 chr20 5629791 5630081 -66523801 + AluSx SINE Alu 1 292 -20 299 143 0 0 chr20 5630696 5630738 -66523144 + MER20 DNA MER1_type 178 219 0 2363 85 0 0 chr20 5632242 5632549 -66521333 - AluSg SINE Alu -3 307 1 180 0 0 0 chr20 5633285 5633305 -66520577 + (TG)n Simple_repeat Simple_repeat 2 21 0 183 42 0 0 chr20 5633358 5633382 -66520500 + (GA)n Simple_repeat Simple_repeat 2 25 0 946 207 0 22 chr20 5633514 5633693 -66520189 - FAM SINE Alu 0 175 1 419 244 128 55 chr20 5634420 5634472 -66519410 - MER5A DNA MER1_type -2 187 140 2107 90 30 3 chr20 5634472 5634773 -66519109 + AluSx SINE Alu 1 309 -3 419 244 128 55 chr20 5634773 5634884 -66518998 - MER5A DNA MER1_type -49 140 12 207 0 0 0 chr20 5635197 5635220 -66518662 + (T)n Simple_repeat Simple_repeat 1 23 0 617 264 245 23 chr20 5635292 5635895 -66517987 - L2 LINE L2 0 3313 2596 1261 135 61 156 chr20 5636492 5636713 -66517169 - MER2 DNA MER2_type -1 343 171 2088 122 0 0 chr20 5636713 5637017 -66516865 + AluSx SINE Alu 1 304 -8 1261 135 61 156 chr20 5637017 5637174 -66516708 - MER2 DNA MER2_type -173 171 1 344 182 26 39 chr20 5637369 5637446 -66516436 + L2 LINE L2 3238 3313 0 255 183 56 14 chr20 5637975 5638046 -66515836 + L2 LINE L2 2905 2978 -335 451 260 0 0 chr20 5638538 5638642 -66515240 + MER3 DNA MER1_type 70 126 -83 264 295 150 20 chr20 5639285 5639485 -66514397 - MIR SINE MIR -24 238 13 2353 142 59 29 chr20 5641473 5641794 -66512088 - L1MB5 LINE L1 -13 6161 5822 2139 99 0 14 chr20 5641794 5642087 -66511795 - AluSx SINE Alu -23 289 1 2353 142 59 29 chr20 5642087 5642209 -66511673 - L1MB5 LINE L1 -352 5822 5705 384 233 78 0 chr20 5642217 5642307 -66511575 + MER82 DNA MER2_type 1 97 -556 * 1393 249 119 0 chr20 5642303 5642673 -66511209 + MER82 DNA MER2_type 228 641 -12 1162 174 10 0 chr20 5642685 5642881 -66511001 - L1MB5 LINE L1 -495 5679 5482 21 36 0 0 chr20 5643125 5643153 -66510729 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr20 5643581 5643603 -66510279 + AT_rich Low_complexity Low_complexity 1 22 0 1991 134 0 0 chr20 5644865 5645197 -66508685 - AluSx SINE Alu 0 332 1 510 17 0 0 chr20 5645509 5645568 -66508314 + (TG)n Simple_repeat Simple_repeat 2 60 0 234 0 0 0 chr20 5648429 5648455 -66505427 + (CA)n Simple_repeat Simple_repeat 2 27 0 952 150 105 163 chr20 5650535 5650631 -66503251 + MER2 DNA MER2_type 2 102 -242 1454 172 17 43 chr20 5650631 5650933 -66502949 + AluJo SINE Alu 1 294 -18 952 150 105 163 chr20 5650933 5651197 -66502685 + MER2 DNA MER2_type 102 341 -3 1337 98 112 0 chr20 5651685 5651783 -66502099 - MER30 DNA MER1_type 0 230 144 2101 117 7 3 chr20 5651783 5652090 -66501792 - AluSq SINE Alu -5 308 1 1337 98 112 0 chr20 5652090 5652196 -66501686 - MER30 DNA MER1_type -86 144 3 2303 42 0 3 chr20 5652482 5652786 -66501096 + AluY SINE Alu 1 303 0 308 239 101 55 chr20 5653061 5653170 -66500712 + HAL1 LINE L1 1403 1516 -991 231 231 0 0 chr20 5653170 5653222 -66500660 + L1MDa LINE L1 1846 1897 -4643 461 200 252 26 chr20 5653567 5653713 -66500169 + MER5C DNA MER1_type 11 123 -201 1604 159 9 62 chr20 5653713 5654034 -66499848 - AluJb SINE Alu -4 308 5 461 200 252 26 chr20 5654034 5654117 -66499765 + MER5C DNA MER1_type 123 292 -32 1085 175 0 0 chr20 5654118 5654307 -66499575 + AluJb SINE Alu 113 301 -11 1032 124 164 45 chr20 5654307 5654341 -66499541 + Tigger3(Golem) DNA MER2_type 2814 2843 -195 2138 101 8 62 chr20 5654341 5654697 -66499185 - MER1B DNA MER1_type 0 337 1 1032 124 164 45 chr20 5654697 5654863 -66499019 + Tigger3(Golem) DNA MER2_type 2843 3038 0 1297 120 12 100 chr20 5654875 5655134 -66498748 + MER46A DNA MER2_type 1 236 0 622 274 88 86 chr20 5656031 5656309 -66497573 - L1MC4a LINE L1 -1903 5905 5629 2364 90 0 0 chr20 5656309 5656619 -66497263 - AluSx SINE Alu -2 310 1 622 274 88 86 chr20 5656619 5656930 -66496952 - L1MC4a LINE L1 -2179 5629 5312 806 63 9 18 chr20 5656930 5657041 -66496841 - L1PA11 LINE L1 -1 6173 6064 622 274 88 86 chr20 5657041 5657099 -66496783 - L1MC4a LINE L1 -2496 5312 5256 306 182 121 30 chr20 5657197 5657263 -66496619 + L1M4 LINE L1 5215 5286 -860 1375 147 5 0 chr20 5657501 5657712 -66496170 - AluJb SINE Alu -93 219 8 318 115 0 0 chr20 5657965 5658017 -66495865 + (TCCCC)n Simple_repeat Simple_repeat 3 54 0 486 33 0 0 chr20 5658017 5658077 -66495805 + (TTCC)n Simple_repeat Simple_repeat 3 62 0 1604 168 7 21 chr20 5658077 5658368 -66495514 - AluJb SINE Alu -25 287 1 27 0 0 0 chr20 5658515 5658542 -66495340 + AT_rich Low_complexity Low_complexity 1 27 0 1881 135 44 3 chr20 5658704 5659000 -66494882 + AluSx SINE Alu 1 308 -4 264 333 0 0 chr20 5659063 5659159 -66494723 + L1MC4 LINE L1 7791 7886 -156 * 620 174 0 7 chr20 5659150 5659279 -66494603 + L1M4 LINE L1 4731 4854 -1292 378 200 0 0 chr20 5659280 5659345 -66494537 - AluSc SINE Alu -3 296 232 1606 169 14 7 chr20 5659827 5660111 -66493771 - AluJb SINE Alu -26 286 1 494 328 53 32 chr20 5660162 5660409 -66493473 - L1MC4a LINE L1 -1539 4607 4356 452 202 134 8 chr20 5660429 5660548 -66493334 - MER58C DNA MER1_type -38 177 44 180 321 64 64 chr20 5660877 5661017 -66492865 - L2 LINE L2 0 3272 3133 765 177 39 0 chr20 5661055 5661185 -66492697 - AluJo SINE Alu -176 136 2 2066 69 62 14 chr20 5661521 5661811 -66492071 + AluSp SINE Alu 1 304 -9 1845 134 46 0 chr20 5661831 5662115 -66491767 + AluJb SINE Alu 4 300 -12 378 288 52 57 chr20 5662472 5662684 -66491198 + MIR SINE MIR 52 262 0 817 141 0 16 chr20 5663559 5663687 -66490195 + FLAM_A SINE Alu 1 126 -7 2407 58 0 13 chr20 5664316 5664629 -66489253 - AluY SINE Alu -2 309 1 345 316 53 8 chr20 5664789 5664922 -66488960 - HAL1 LINE L1 -909 1598 1460 2450 72 0 0 chr20 5664934 5665240 -66488642 - AluY SINE Alu -5 306 1 2119 101 3 7 chr20 5665270 5665567 -66488315 - AluSq SINE Alu -17 296 1 967 200 118 0 chr20 5665750 5665945 -66487937 - MER20 DNA MER1_type -1 218 1 1873 114 0 86 chr20 5666499 5666823 -66487059 - AluSx SINE Alu -15 297 2 778 206 106 0 chr20 5666934 5667123 -66486759 - MER3 DNA MER1_type 0 209 1 1677 175 0 38 chr20 5668350 5668670 -66485212 - AluJb SINE Alu -2 310 3 1145 180 8 40 chr20 5668796 5669046 -66484836 - AluJo SINE Alu -24 288 47 46 83 0 0 chr20 5669053 5669162 -66484720 + AT_rich Low_complexity Low_complexity 1 109 0 468 262 87 0 chr20 5669162 5669288 -66484594 - FRAM SINE Alu -31 145 9 2074 94 14 0 chr20 5669310 5669598 -66484284 - AluSx SINE Alu -20 292 1 548 152 0 48 chr20 5669599 5669704 -66484178 + MER58C DNA MER1_type 108 207 -8 2290 57 7 0 chr20 5670234 5670590 -66483292 - AluSp SINE Alu 0 358 1 736 168 23 15 chr20 5670613 5670744 -66483138 - FLAM_C SINE Alu -1 132 1 2381 21 0 3 chr20 5671884 5672206 -66481676 - AluY SINE Alu 0 321 1 560 119 0 24 chr20 5672318 5672402 -66481480 - MER4A LTR ERV1 0 664 583 855 208 23 12 chr20 5672413 5672586 -66481296 + AluJb SINE Alu 134 308 -4 892 147 12 18 chr20 5672933 5672949 -66480933 + MER5A DNA MER1_type 1 15 -174 390 259 41 41 chr20 5672949 5673119 -66480763 - MER5A DNA MER1_type -2 187 18 335 211 0 0 chr20 5673170 5673238 -66480644 + MER5A DNA MER1_type 32 97 -81 569 204 309 0 chr20 5675471 5675633 -66478249 + MIR SINE MIR 13 224 -38 2079 67 57 3 chr20 5675639 5675921 -66477961 + AluY SINE Alu 1 297 -14 2076 77 0 0 chr20 5676710 5676994 -66476888 + AluSg SINE Alu 21 304 0 1355 139 132 26 chr20 5677321 5677587 -66476295 + AluJb SINE Alu 1 294 -18 1904 137 3 3 chr20 5680306 5680606 -66473276 - AluSx SINE Alu -12 300 1 246 221 177 44 chr20 5680859 5680972 -66472910 + MIR SINE MIR 81 208 -54 336 209 136 27 chr20 5681143 5681253 -66472629 + MARNA DNA Mariner 296 417 -169 3262 94 24 2 chr20 5681501 5681957 -66471925 - MER41A LTR ERV1 -88 466 1 3720 91 55 2 chr20 5681957 5682497 -66471385 - MER41A-int LTR ERV1 -2 6093 5394 669 81 23 0 chr20 5682479 5682565 -66471317 - MER41B-int LTR ERV1 -5858 88 1 * 952 150 0 0 chr20 5682565 5682718 -66471164 - MER41B LTR ERV1 0 635 483 1013 161 16 27 chr20 5682719 5682792 -66471090 - MER58A DNA MER1_type -2203 217 145 1621 152 35 90 chr20 5682792 5683160 -66470722 - MER7A DNA MER2_type 0 346 1 1013 161 16 27 chr20 5683160 5683272 -66470610 - MER58A DNA MER1_type -2275 145 34 827 217 33 5 chr20 5684400 5684584 -66469298 - MER5A DNA MER1_type 0 189 1 326 265 74 48 chr20 5684590 5685017 -66468865 + L1M4 LINE L1 3313 3846 -2300 1823 107 26 23 chr20 5685061 5685369 -66468513 + AluSg SINE Alu 1 309 -1 250 297 0 31 chr20 5685596 5685724 -66468158 + HAL1 LINE L1 2301 2424 -83 196 313 78 16 chr20 5685818 5685882 -66468000 - L2 LINE L2 -1 3271 3204 1517 195 0 13 chr20 5686323 5686626 -66467256 + AluJo SINE Alu 1 299 -13 5044 170 81 53 chr20 5688220 5688783 -66465099 + Charlie1a DNA MER1_type 1 547 -2214 1912 107 36 32 chr20 5688783 5689092 -66464790 + AluSx SINE Alu 1 310 -2 5044 170 81 53 chr20 5689092 5689240 -66464642 + Charlie1a DNA MER1_type 547 689 -2072 234 0 0 0 chr20 5689240 5689266 -66464616 + (TG)n Simple_repeat Simple_repeat 2 27 0 5044 170 81 53 chr20 5689266 5689738 -66464144 + Charlie1a DNA MER1_type 689 1218 -237 2087 144 101 36 chr20 5689786 5690202 -66463680 - MSTB2 LTR MaLR 0 457 15 716 162 17 8 chr20 5690603 5690720 -66463162 + FLAM_C SINE Alu 1 118 -15 509 183 50 0 chr20 5696054 5696174 -66457708 - MIR SINE MIR -21 241 116 575 190 8 0 chr20 5696279 5696400 -66457482 + MIR SINE MIR 141 262 0 22 0 0 0 chr20 5698316 5698338 -66455544 + AT_rich Low_complexity Low_complexity 1 22 0 204 67 0 0 chr20 5698418 5698448 -66455434 + (T)n Simple_repeat Simple_repeat 1 30 0 204 348 140 6 chr20 5699568 5699746 -66454136 + L2 LINE L2 2493 2694 -620 7688 19 0 0 chr20 5700597 5701695 -66452187 - L1PA4 LINE L1 0 6155 5047 11876 27 4 0 chr20 5701695 5703076 -66450806 + L1PA4 LINE L1 3675 5060 -1086 2272 95 0 7 chr20 5703078 5703372 -66450510 - AluSx SINE Alu -12 300 9 1106 252 151 44 chr20 5703382 5703946 -66449936 - L2 LINE L2 -9 3304 2802 477 47 0 0 chr20 5703946 5704010 -66449872 + (CA)n Simple_repeat Simple_repeat 2 65 0 1106 252 151 44 chr20 5704010 5704397 -66449485 - L2 LINE L2 -511 2802 2174 758 209 22 44 chr20 5705144 5705326 -66448556 + MER5B DNA MER1_type 1 178 0 2341 94 0 3 chr20 5705552 5705851 -66448031 - AluSx SINE Alu -14 298 1 192 309 43 52 chr20 5705854 5706064 -66447818 - L3 LINE CR1 -257 1320 1113 907 162 81 0 chr20 5706347 5706587 -66447295 - L1MC4 LINE L1 0 8042 7683 236 302 105 0 chr20 5706823 5706909 -66446973 + MIR SINE MIR 56 150 -112 816 203 4 84 chr20 5707331 5707568 -66446314 + MIR SINE MIR 45 262 0 1906 160 24 0 chr20 5707628 5707921 -66445961 - AluSx SINE Alu -12 300 1 809 192 28 84 chr20 5708120 5708406 -66445476 + L1MC5 LINE L1 6810 7079 -882 747 181 0 0 chr20 5708449 5708565 -66445317 - FLAM_C SINE Alu -23 120 5 826 165 86 58 chr20 5708569 5708812 -66445070 + L1M4 LINE L1 4897 5146 -1000 282 363 25 0 chr20 5709531 5709688 -66444194 - MIR SINE MIR -11 251 91 3195 224 16 0 chr20 5710142 5710853 -66443029 + L1 LINE L1 3899 4620 -1526 1032 160 0 17 chr20 5710866 5711041 -66442841 - FRAM SINE Alu -7 169 1 2457 185 25 53 chr20 5711043 5711410 -66442472 + L1 LINE L1 4607 4983 -1163 2048 145 0 3 chr20 5711410 5711707 -66442175 - AluSx SINE Alu -16 296 1 2457 185 25 53 chr20 5711707 5711881 -66442001 + L1 LINE L1 4983 5134 -1012 2346 110 0 0 chr20 5711881 5712189 -66441693 + AluSx SINE Alu 1 308 -4 2457 185 25 53 chr20 5712189 5712214 -66441668 + L1 LINE L1 5134 5158 -988 418 282 18 0 chr20 5712244 5712354 -66441528 - LTR16C LTR ERVL -235 256 145 942 151 33 160 chr20 5712443 5712719 -66441163 + MER33 DNA MER1_type 1 215 -2370 1572 171 13 49 chr20 5712719 5713023 -66440859 - AluJb SINE Alu -19 293 1 942 151 33 160 chr20 5713023 5713113 -66440769 + MER33 DNA MER1_type 215 315 -9 1162 271 73 40 chr20 5713837 5714261 -66439621 - MLT1J LTR MaLR -73 438 1 1800 92 24 4 chr20 5714452 5714703 -66439179 + L1PA10 LINE L1 5908 6163 -5 402 21 0 0 chr20 5714722 5714769 -66439113 + (TG)n Simple_repeat Simple_repeat 1 47 0 419 265 84 63 chr20 5716427 5716629 -66437253 - L2 LINE L2 -648 2666 2457 2124 131 0 16 chr20 5716629 5716934 -66436948 + AluSx SINE Alu 1 300 -12 419 265 84 63 chr20 5716934 5716969 -66436913 - L2 LINE L2 -857 2457 2424 474 276 70 37 chr20 5717444 5717557 -66436325 - LTR16C LTR ERVL -26 465 357 1753 146 41 0 chr20 5717557 5717825 -66436057 + AluJo SINE Alu 1 279 -33 474 276 70 37 chr20 5717825 5718107 -66435775 - LTR16C LTR ERVL -134 357 1 2044 128 0 50 chr20 5718228 5718547 -66435335 - AluSx SINE Alu -9 303 1 456 62 0 0 chr20 5718563 5718627 -66435255 + (TA)n Simple_repeat Simple_repeat 2 65 0 2541 128 32 5 chr20 5719416 5719816 -66434066 - MSTB LTR MaLR -15 411 1 785 299 126 24 chr20 5720077 5720763 -66433119 + L2 LINE L2 2555 3308 -5 210 280 84 56 chr20 5720861 5721004 -66432878 + MIR3 SINE MIR 48 194 -14 1106 249 127 28 chr20 5721142 5721575 -66432307 + LTR16C LTR ERVL 1 476 -15 2997 107 9 12 chr20 5722754 5723183 -66430699 + MSTC LTR MaLR 1 428 0 2624 65 0 0 chr20 5723538 5723848 -66430034 - AluY SINE Alu -1 310 1 1386 229 91 21 chr20 5724945 5725365 -66428517 + LTR16A1 LTR ERVL 8 456 -1 2222 125 0 10 chr20 5725519 5725823 -66428059 - AluSx SINE Alu -10 302 2 2276 170 62 5 chr20 5726142 5726577 -66427305 + MLT1C LTR MaLR 6 465 -2 320 64 21 0 chr20 5726829 5726876 -66427006 + (TTTC)n Simple_repeat Simple_repeat 3 50 0 4073 42 16 8 chr20 5726902 5727403 -66426479 - L1PA6 LINE L1 -11 6143 5639 400 278 26 0 chr20 5727911 5728026 -66425856 - Charlie7 DNA MER1_type -1922 690 573 2437 78 0 0 chr20 5728255 5728551 -66425331 + AluY SINE Alu 1 296 -15 2112 128 0 0 chr20 5729139 5729436 -66424446 - AluJb SINE Alu -15 297 1 1935 243 96 98 chr20 5729522 5730153 -66423729 + Charlie7 DNA MER1_type 125 753 -1859 2216 140 0 0 chr20 5730153 5730461 -66423421 + AluSx SINE Alu 1 308 -4 1935 243 96 98 chr20 5730461 5730968 -66422914 + Charlie7 DNA MER1_type 753 1260 -1352 226 222 0 0 chr20 5731189 5731234 -66422648 + Charlie7 DNA MER1_type 1377 1421 -1191 587 106 24 0 chr20 5731235 5731320 -66422562 + MER21B LTR ERV1 329 415 -448 210 71 0 0 chr20 5731360 5731388 -66422494 + (TAAAA)n Simple_repeat Simple_repeat 3 30 0 569 212 152 24 chr20 5731426 5731591 -66422291 + Charlie7 DNA MER1_type 1503 1688 -924 321 238 42 49 chr20 5732048 5732191 -66421691 + L1MC5 LINE L1 7540 7681 -280 1189 182 153 10 chr20 5732197 5732482 -66421400 + MLT1A1 LTR MaLR 1 333 -32 791 195 7 7 chr20 5732482 5732636 -66421246 - FRAM SINE Alu -22 154 1 247 294 28 51 chr20 5732676 5732931 -66420951 + L1MC4 LINE L1 7794 8042 0 379 250 153 20 chr20 5732952 5733148 -66420734 + Charlie7 DNA MER1_type 1713 1934 -678 3537 197 43 7 chr20 5733149 5733966 -66419916 + L1MB2 LINE L1 4342 5187 -959 1210 196 141 4 chr20 5733969 5734224 -66419658 + AluJo SINE Alu 2 291 -11 369 185 80 8 chr20 5734227 5734338 -66419544 + Alu SINE Alu 234 297 -5 5030 145 32 23 chr20 5734348 5734956 -66418926 + L1MB2 LINE L1 5166 5791 -380 184 57 29 29 chr20 5734956 5734991 -66418891 + (TA)n Simple_repeat Simple_repeat 1 35 0 5030 145 32 23 chr20 5734991 5735375 -66418507 + L1MB2 LINE L1 5791 6170 -1 884 224 114 59 chr20 5735389 5735897 -66417985 + Charlie7 DNA MER1_type 1927 2462 -150 207 0 0 0 chr20 5736066 5736089 -66417793 + (GGGA)n Simple_repeat Simple_repeat 4 26 0 1120 176 35 0 chr20 5736163 5736362 -66417520 + MER3 DNA MER1_type 2 207 -2 588 40 0 0 chr20 5736883 5736958 -66416924 + (TTTC)n Simple_repeat Simple_repeat 2 76 0 32612 110 12 52 chr20 5736958 5743355 -66410527 - L1PA7 LINE L1 -12 6142 12 1701 95 32 4 chr20 5743597 5743849 -66410033 + L1MA2 LINE L1 6006 6264 -40 3784 66 10 0 chr20 5743849 5744330 -66409552 + L1PA6 LINE L1 5663 6153 -1 331 167 0 0 chr20 5744963 5745023 -66408859 + L1MA3 LINE L1 6246 6305 0 618 269 8 61 chr20 5745773 5746037 -66407845 + L1M4 LINE L1 4442 4691 -1455 259 276 0 0 chr20 5746097 5746155 -66407727 - L2 LINE L2 0 3313 3256 1160 155 5 15 chr20 5746200 5746400 -66407482 - L1PB2 LINE L1 -3 6148 5951 182 279 162 0 chr20 5746452 5746520 -66407362 + MIR SINE MIR 66 144 -118 15161 171 24 10 chr20 5746660 5752278 -66401604 - L1PB2 LINE L1 -175 6692 998 360 111 0 0 chr20 5752278 5752332 -66401550 + (T)n Simple_repeat Simple_repeat 1 54 0 3530 222 21 12 chr20 5752361 5753225 -66400657 - L1M4c LINE L1 -3263 4302 3328 1931 149 3 34 chr20 5753225 5753547 -66400335 - AluSx SINE Alu 0 312 1 3530 222 21 12 chr20 5753547 5753974 -66399908 - L1M4c LINE L1 -4237 3328 2906 1509 195 22 11 chr20 5753974 5754251 -66399631 - AluJo SINE Alu -2 310 31 605 350 5 9 chr20 5754251 5754465 -66399417 - L1M4c LINE L1 -5742 1744 1532 * 963 186 9 27 chr20 5754453 5754673 -66399209 - L1 LINE L1 -2567 3579 3364 * 2545 160 44 48 chr20 5754671 5755196 -66398686 + L1MA9 LINE L1 5768 6290 -22 180 0 0 0 chr20 5755204 5755224 -66398658 + (GAAAA)n Simple_repeat Simple_repeat 2 21 0 6691 185 58 51 chr20 5755226 5755977 -66397905 + L1MD1 LINE L1 14 758 -5782 2017 123 0 27 chr20 5755977 5756277 -66397605 + AluSx SINE Alu 1 292 -20 6691 185 58 51 chr20 5756277 5757609 -66396273 + L1MD1 LINE L1 758 2453 -4087 3372 241 43 18 chr20 5757604 5757696 -66396186 + L1MD1 LINE L1 4158 4246 -2294 * 737 238 0 0 chr20 5757696 5757822 -66396060 + FLAM_A SINE Alu 1 126 -7 3372 241 43 18 chr20 5757822 5758678 -66395204 + L1MD1 LINE L1 4246 5130 -1410 1798 166 31 17 chr20 5758680 5759029 -66394853 - MLT1A1 LTR MaLR 0 365 12 2262 197 44 49 chr20 5759041 5760125 -66393757 + L1MD1 LINE L1 5129 6214 -422 5405 66 19 9 chr20 5760131 5760814 -66393068 + L1PA10 LINE L1 5479 6168 0 2491 151 44 2 chr20 5760814 5761223 -66392659 + L1MD1 LINE L1 6208 6636 0 2061 109 3 3 chr20 5761231 5761545 -66392337 + AluSx SINE Alu 1 314 0 2123 102 0 23 chr20 5761638 5761941 -66391941 - AluSc SINE Alu -12 297 2 451 270 65 99 chr20 5762103 5762820 -66391062 + L1MC4a LINE L1 5255 5931 -231 3144 133 44 11 chr20 5763637 5764179 -66389703 + L1MC1 LINE L1 5383 5942 -391 1073 210 58 0 chr20 5764177 5764401 -66389481 - L1ME LINE L1 -540 5624 5388 * 565 189 217 0 chr20 5764928 5765071 -66388811 - MER5A DNA MER1_type -7 182 9 2486 129 65 8 chr20 5765252 5765654 -66388228 - MSTB1 LTR MaLR 0 432 8 318 231 17 0 chr20 5765780 5765871 -66388011 + L1ME LINE L1 5750 5817 -304 1227 259 171 23 chr20 5766452 5766880 -66387002 + LTR16C LTR ERVL 1 491 0 917 240 132 12 chr20 5767179 5767467 -66386415 - HAL1 LINE L1 -2114 393 58 2080 144 0 3 chr20 5767467 5767766 -66386116 + AluSx SINE Alu 1 298 -14 917 240 132 12 chr20 5767766 5767810 -66386072 - HAL1 LINE L1 -2449 58 21 502 265 27 27 chr20 5767913 5768060 -66385822 - MER5A DNA MER1_type -3 186 40 464 354 91 30 chr20 5768175 5768537 -66385345 - L3 LINE CR1 -174 1403 1020 1837 163 35 0 chr20 5769925 5770214 -66383668 - AluJo SINE Alu -13 299 1 231 36 0 0 chr20 5770735 5770763 -66383119 + (TTCA)n Simple_repeat Simple_repeat 4 31 0 1490 111 0 5 chr20 5771024 5771231 -66382651 - AluY SINE Alu -105 206 1 188 283 120 22 chr20 5771438 5771530 -66382352 + MIR SINE MIR 30 130 -78 342 0 0 0 chr20 5771648 5771686 -66382196 + (TC)n Simple_repeat Simple_repeat 2 39 0 2059 83 4 0 chr20 5772355 5772634 -66381248 + AluSp SINE Alu 32 311 0 1477 212 33 44 chr20 5772723 5773086 -66380796 - MLT1A1 LTR MaLR -6 359 1 614 211 68 84 chr20 5773315 5773552 -66380330 + LTR16A1 LTR ERVL 205 437 -20 1486 225 15 0 chr20 5773863 5774187 -66379695 - L1MA9 LINE L1 -34 6278 5950 693 204 0 0 chr20 5774197 5774329 -66379553 + MIR SINE MIR 59 190 -72 506 261 86 39 chr20 5775260 5775701 -66378181 + LTR33 LTR ERVL 14 521 0 207 0 0 0 chr20 5776767 5776790 -66377092 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 419 288 0 14 chr20 5776895 5777034 -66376848 - L1M4 LINE L1 -1300 4846 4710 343 333 63 8 chr20 5777079 5777331 -66376551 - L1M4 LINE L1 -1819 4327 4062 8493 31 0 1 chr20 5777375 5779100 -66374782 - L1PA3 LINE L1 0 6155 4431 10768 26 0 0 chr20 5779100 5780370 -66373512 + L1P LINE L1 2693 3962 -2184 274 155 0 28 chr20 5780655 5780726 -66373156 + CT-rich Low_complexity Low_complexity 1 69 0 3524 195 19 2 chr20 5781440 5782075 -66371807 + MER82 DNA MER2_type 1 646 -7 948 106 8 0 chr20 5783168 5783300 -66370582 - MLT1D LTR MaLR 0 505 373 15922 195 30 14 chr20 5783307 5787114 -66366768 + L1PB1 LINE L1 6 4134 -2733 2071 95 0 0 chr20 5787114 5787387 -66366495 + AluY SINE Alu 39 311 0 15922 195 30 14 chr20 5787387 5790162 -66363720 + L1PB1 LINE L1 4134 6863 -4 530 211 261 0 chr20 5790224 5790366 -66363516 - MLT1D LTR MaLR -118 387 209 189 0 0 0 chr20 5790392 5790413 -66363469 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 733 214 0 0 chr20 5790419 5790536 -66363346 - FLAM_C SINE Alu -25 118 2 1133 174 18 28 chr20 5790555 5790773 -66363109 - MLT1D LTR MaLR -289 216 1 1894 141 28 0 chr20 5791064 5791347 -66362535 + AluJb SINE Alu 14 304 -8 1978 141 8 57 chr20 5791348 5791716 -66362166 + L1MA8 LINE L1 5942 6291 0 198 289 14 41 chr20 5792120 5792269 -66361613 - L3 LINE CR1 -885 692 473 23 0 0 0 chr20 5793444 5793467 -66360415 + AT_rich Low_complexity Low_complexity 1 23 0 32 57 0 0 chr20 5794337 5794390 -66359492 + AT_rich Low_complexity Low_complexity 1 53 0 481 255 145 30 chr20 5796211 5796411 -66357471 - MIR SINE MIR -3 259 37 1416 196 45 17 chr20 5797315 5797606 -66356276 - AluJo SINE Alu -9 303 5 2094 123 0 0 chr20 5798090 5798383 -66355499 + AluSx SINE Alu 1 293 -19 1059 144 57 6 chr20 5798511 5798900 -66354982 + LTR64 LTR ERVK 1 552 -6 189 398 48 0 chr20 5799429 5799512 -66354370 + MIR SINE MIR 58 144 -118 426 85 0 0 chr20 5799562 5799621 -66354261 + (TG)n Simple_repeat Simple_repeat 1 59 0 27 29 0 0 chr20 5800632 5800666 -66353216 + AT_rich Low_complexity Low_complexity 1 34 0 1881 139 10 7 chr20 5800807 5801108 -66352774 - AluSx SINE Alu -10 302 1 228 167 0 21 chr20 5801191 5801239 -66352643 + (CAAA)n Simple_repeat Simple_repeat 1 47 0 243 293 116 102 chr20 5801761 5801908 -66351974 - MIR SINE MIR -81 181 33 194 0 39 0 chr20 5802389 5802415 -66351467 + (TTG)n Simple_repeat Simple_repeat 2 28 0 1969 128 7 0 chr20 5802417 5802715 -66351167 - AluSx SINE Alu -12 300 1 536 314 80 29 chr20 5804095 5804334 -66349548 + MIR SINE MIR 12 262 0 205 250 167 42 chr20 5804568 5804664 -66349218 - MIR SINE MIR -79 129 22 254 98 0 24 chr20 5805027 5805068 -66348814 + MER9 LTR ERVK 1 40 -471 20223 64 21 18 chr20 5805068 5805702 -66348180 + HERVK9 LTR ERVK 138 769 -5147 184 228 0 88 chr20 5805702 5805759 -66348123 + MER5B DNA MER1_type 58 109 -69 20223 64 21 18 chr20 5805759 5807710 -66346172 + HERVK9 LTR ERVK 769 2786 -3130 1921 48 0 0 chr20 5807710 5807941 -66345941 + HERVK9 LTR ERVK 3711 3941 -1975 * 7982 94 2 3 chr20 5807940 5808994 -66344888 + HERVK9 LTR ERVK 4582 5634 -282 2261 90 35 4 chr20 5809035 5809364 -66344518 + HERVK9 LTR ERVK 4922 5916 0 3731 77 8 49 chr20 5809364 5809897 -66343985 + MER9 LTR ERVK 1 511 0 1939 187 49 55 chr20 5810392 5810900 -66342982 - MLT1D LTR MaLR 0 505 1 388 242 50 115 chr20 5811121 5811303 -66342579 + MIR3 SINE MIR 18 187 -21 323 242 24 23 chr20 5811844 5812020 -66341862 + LTR16C LTR ERVL 240 490 -1 3650 65 0 0 chr20 5812736 5813180 -66340702 + MLT2A1 LTR ERVL 1 444 0 408 256 33 16 chr20 5813181 5813302 -66340580 - MER5A DNA MER1_type -7 182 60 2267 81 0 0 chr20 5813304 5813589 -66340293 - AluSq SINE Alu -26 287 3 1501 97 8 24 chr20 5814101 5814349 -66339533 + L1MA5 LINE L1 6055 6298 -2 595 217 67 27 chr20 5814544 5814731 -66339151 + L1ME3 LINE L1 5883 6074 -88 185 273 73 0 chr20 5816207 5816262 -66337620 + MIR SINE MIR 81 139 -123 268 299 0 0 chr20 5816266 5816333 -66337549 + L2 LINE L2 3245 3311 -2 567 70 40 60 chr20 5817607 5817707 -66336175 - L1M3 LINE L1 -509 5674 5577 314 130 234 13 chr20 5817719 5817796 -66336086 + Charlie1 DNA MER1_type 2620 2713 -48 270 189 38 0 chr20 5817895 5817948 -66335934 - MER94 DNA DNA -79 55 1 1771 181 3 0 chr20 5819366 5819670 -66334212 - AluJb SINE Alu -3 309 5 1784 244 98 7 chr20 5820296 5820743 -66333139 - MLT1J LTR MaLR -18 493 6 692 177 46 0 chr20 5821124 5821254 -66332628 - FLAM_C SINE Alu -6 137 2 556 191 157 0 chr20 5821279 5821394 -66332488 - FLAM_A SINE Alu 0 133 1 588 119 0 40 chr20 5821494 5821595 -66332287 - AluSg/x SINE Alu 0 312 216 205 219 109 47 chr20 5821770 5821834 -66332048 - MIR SINE MIR -99 109 42 782 112 0 40 chr20 5822546 5822671 -66331211 - AluJb SINE Alu -1 311 192 236 299 89 0 chr20 5822760 5822917 -66330965 - L1ME LINE L1 -671 5450 5280 887 143 0 0 chr20 5823127 5823253 -66330629 - FLAM_C SINE Alu -7 126 1 2078 113 7 0 chr20 5823264 5823566 -66330316 - AluSq SINE Alu -9 304 1 266 204 57 23 chr20 5823566 5823654 -66330228 - L1 LINE L1 -1102 5044 4954 204 286 32 16 chr20 5823902 5823965 -66329917 - MIR3 SINE MIR -142 66 3 751 189 8 0 chr20 5825034 5825161 -66328721 + FLAM_A SINE Alu 4 131 -2 734 172 8 0 chr20 5825166 5825288 -66328594 - FLAM_C SINE Alu -19 124 2 2334 96 3 0 chr20 5825303 5825615 -66328267 - AluSp SINE Alu 0 313 1 186 71 0 0 chr20 5825632 5825660 -66328222 + (A)n Simple_repeat Simple_repeat 1 28 0 2123 99 0 3 chr20 5826011 5826294 -66327588 + AluSx SINE Alu 1 282 -30 412 261 43 43 chr20 5826645 5826806 -66327076 + MER112 DNA MER1_type 17 177 -83 583 245 109 11 chr20 5826813 5826997 -66326885 - L1ME3A LINE L1 -6 6164 5963 392 191 95 0 chr20 5827004 5827088 -66326794 + MER112 DNA MER1_type 161 252 -8 207 295 66 0 chr20 5827127 5827188 -66326694 - MIR SINE MIR -67 141 77 371 229 194 14 chr20 5827956 5828100 -66325782 - L2 LINE L2 -36 3277 3108 207 0 0 0 chr20 5828191 5828214 -66325668 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1787 159 0 0 chr20 5828216 5828499 -66325383 - AluJb SINE Alu -29 283 1 756 178 59 87 chr20 5829103 5829356 -66324526 - MLT1D LTR MaLR -256 249 4 190 341 71 29 chr20 5829579 5829749 -66324133 - L2 LINE L2 -578 2736 2560 845 289 135 27 chr20 5830157 5830558 -66323324 - MLT1K LTR MaLR -19 569 126 1979 193 23 3 chr20 5831063 5831416 -66322466 - MLT1A1 LTR MaLR 0 365 6 1131 70 41 35 chr20 5831535 5831707 -66322175 - MER30 DNA MER1_type -57 173 1 2010 122 0 22 chr20 5831716 5832027 -66321855 - AluSq SINE Alu -9 304 1 1259 63 11 37 chr20 5832721 5832910 -66320972 - L1PA3 LINE L1 0 6155 5972 953 143 35 64 chr20 5834034 5834083 -66319799 - MER3 DNA MER1_type 0 209 160 4349 126 22 27 chr20 5834083 5834824 -66319058 - L1MB3 LINE L1 -1 6182 5446 953 143 35 64 chr20 5834824 5834977 -66318905 - MER3 DNA MER1_type -49 160 13 209 217 0 22 chr20 5835448 5835494 -66318388 - L3 LINE CR1 -568 1009 965 233 286 16 0 chr20 5835554 5835617 -66318265 - MLT1K LTR MaLR -345 243 180 1504 281 59 23 chr20 5835704 5835733 -66318149 - L2 LINE L2 -823 2491 2465 1370 146 35 9 chr20 5835733 5835959 -66317923 + MER46A DNA MER2_type 3 234 -2 1504 281 59 23 chr20 5835959 5836501 -66317381 - L2 LINE L2 -849 2465 1899 661 184 0 0 chr20 5836614 5836723 -66317159 + FLAM_C SINE Alu 2 110 -33 400 166 23 168 chr20 5836723 5836807 -66317075 - L1MC5 LINE L1 -825 6983 7010 2162 102 3 0 chr20 5836807 5837112 -66316770 - AluSp SINE Alu -7 306 1 400 166 23 168 chr20 5837112 5837237 -66316645 - L1MC5 LINE L1 -797 7011 6870 2099 124 3 0 chr20 5837331 5837637 -66316245 - AluSx SINE Alu -1 311 5 236 233 139 0 chr20 5838988 5839074 -66314808 - L2 LINE L2 -35 3237 3140 841 208 0 0 chr20 5839095 5839254 -66314628 - AluJb SINE Alu -7 305 147 1157 329 172 18 chr20 5839404 5840612 -66313270 - L2 LINE L2 -357 2957 1564 207 100 0 0 chr20 5841085 5841115 -66312767 + (TA)n Simple_repeat Simple_repeat 2 31 0 2239 108 0 9 chr20 5841684 5841999 -66311883 + AluSx SINE Alu 1 312 0 277 176 206 0 chr20 5843037 5843105 -66310777 - L2 LINE L2 -2 3270 3189 1734 37 0 0 chr20 5844326 5844542 -66309340 + L1P LINE L1 3202 3417 -2729 224 311 90 57 chr20 5845303 5845425 -66308457 - MIR SINE MIR -116 146 21 241 262 55 67 chr20 5845928 5846092 -66307790 + L1ME LINE L1 5259 5420 -744 519 219 296 0 chr20 5847831 5848000 -66305882 + MIR SINE MIR 6 224 -38 2227 67 57 3 chr20 5848006 5848288 -66305594 + AluY SINE Alu 1 297 -14 2216 77 0 0 chr20 5849077 5849361 -66304521 + AluSg SINE Alu 21 304 0 308 221 130 102 chr20 5899803 5900088 -66253794 + L1M2 LINE L1 445 737 -6112 299 281 0 22 chr20 5900567 5900656 -66253226 - Charlie8 DNA MER1_type -2205 212 126 198 220 40 0 chr20 5900755 5900805 -66253077 + MIR3 SINE MIR 150 201 -7 736 268 119 40 chr20 5901341 5901796 -66252086 - LTR16C LTR ERVL 0 491 1 204 40 0 0 chr20 5902657 5902682 -66251200 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 970 193 0 0 chr20 5902682 5902832 -66251050 - FRAM SINE Alu -16 150 1 1466 190 6 100 chr20 5902849 5903180 -66250702 - AluJb SINE Alu -2 300 1 496 289 0 72 chr20 5903298 5903354 -66250528 + L1ME LINE L1 5548 5606 -515 1752 175 10 7 chr20 5903354 5903646 -66250236 + AluJo SINE Alu 1 293 -19 496 289 0 72 chr20 5903646 5903797 -66250085 + L1ME LINE L1 5606 5740 -381 2467 70 3 6 chr20 5904553 5904865 -66249017 - AluY SINE Alu 0 311 1 322 203 16 0 chr20 5905329 5905393 -66248489 - LTR16C LTR ERVL 0 491 427 347 222 20 10 chr20 5905431 5905530 -66248352 - MLT1H LTR MaLR -419 130 31 303 265 10 20 chr20 5905613 5905715 -66248167 + LTR67 LTR ERVL 457 557 0 304 206 165 52 chr20 5905719 5905816 -66248066 - MIR SINE MIR -147 115 8 2829 120 34 5 chr20 5907157 5907573 -66246309 - L1PA15 LINE L1 -7 6158 5731 198 0 0 0 chr20 5907823 5907845 -66246037 + (TTTG)n Simple_repeat Simple_repeat 1 22 0 2460 36 0 0 chr20 5907845 5908124 -66245758 - AluY SINE Alu -32 279 1 403 0 0 0 chr20 5908505 5908552 -66245330 + L1PA3 LINE L1 6106 6152 -3 374 285 176 6 chr20 5909686 5909851 -66244031 - MER91A DNA MER1_type -2 194 2 858 212 0 18 chr20 5911970 5912140 -66241742 - MER5B DNA MER1_type -3 175 9 2134 118 20 3 chr20 5912224 5912529 -66241353 - AluSx SINE Alu -2 310 1 5766 150 10 18 chr20 5912682 5913610 -66240272 - MER49 LTR ERV1 0 923 4 2762 203 59 89 chr20 5913614 5914458 -66239424 - MER49-int LTR ERV1 -1 6757 5939 483 98 113 217 chr20 5914460 5914533 -66239349 - MER49-int LTR ERV1 -1367 4964 4885 2020 152 49 21 chr20 5914533 5914861 -66239021 - MER1B DNA MER1_type 0 337 1 483 98 113 217 chr20 5914861 5914918 -66238964 - MER49-int LTR ERV1 -1446 4885 4860 862 154 0 0 chr20 5914918 5915041 -66238841 - FLAM_C SINE Alu -9 124 2 483 98 113 217 chr20 5915041 5915112 -66238770 - MER49-int LTR ERV1 -1471 4860 4783 495 161 7 72 chr20 5915260 5915464 -66238418 - MER49-int LTR ERV1 -4167 3953 3786 588 189 56 39 chr20 5915625 5915863 -66238019 - LTR49-int LTR ERV1 -1865 4733 3913 904 174 7 7 chr20 5915868 5916023 -66237859 + FRAM SINE Alu 4 158 -18 3054 144 29 8 chr20 5916060 5916691 -66237191 - Ricksha DNA DNA -1368 1878 1201 1281 135 333 7 chr20 5916689 5916971 -66236911 - Ricksha DNA DNA -2870 376 3 * 339 268 95 60 chr20 5916980 5917148 -66236734 - MLT1H LTR MaLR -252 297 124 365 0 22 0 chr20 5917378 5917423 -66236459 + (TG)n Simple_repeat Simple_repeat 2 47 0 7196 68 13 13 chr20 5917460 5918452 -66235430 - L1PA10 LINE L1 -3 6165 5171 1480 279 109 33 chr20 5918567 5919285 -66234597 + L1MC4 LINE L1 7270 8041 -1 188 33 0 33 chr20 5919380 5919410 -66234472 + (CAA)n Simple_repeat Simple_repeat 2 30 0 12274 181 37 15 chr20 5919935 5921779 -66232103 + L1MB3 LINE L1 25 1825 -4594 2083 153 3 0 chr20 5921779 5922086 -66231796 - AluJb SINE Alu -4 308 1 12274 181 37 15 chr20 5922086 5925333 -66228549 + L1MB3 LINE L1 1825 5188 -1231 1853 157 16 16 chr20 5925333 5925645 -66228237 - AluJb SINE Alu 0 312 1 12274 181 37 15 chr20 5925645 5926905 -66226977 + L1MB3 LINE L1 5188 6418 -1 188 246 74 66 chr20 5928037 5928159 -66225723 - L2 LINE L2 -184 3088 2966 28 0 0 0 chr20 5928460 5928488 -66225394 + AT_rich Low_complexity Low_complexity 1 28 0 276 350 68 0 chr20 5929463 5929580 -66224302 + L2 LINE L2 2928 3052 -220 1857 166 5 93 chr20 5929921 5930318 -66223564 - MLT1A1 LTR MaLR 0 365 4 551 294 77 21 chr20 5930326 5930561 -66223321 - MIR SINE MIR -10 252 5 1950 185 75 23 chr20 5931483 5931921 -66221961 + MLT1C LTR MaLR 6 466 -1 542 270 18 25 chr20 5931933 5932096 -66221786 + MER5B DNA MER1_type 17 178 0 445 250 0 0 chr20 5932559 5932647 -66221235 + MER5A DNA MER1_type 15 102 -87 889 234 27 0 chr20 5933007 5933191 -66220691 + MER5A DNA MER1_type 1 189 0 1116 191 132 0 chr20 5933297 5933532 -66220350 + L1ME3A LINE L1 5707 5972 -198 2015 123 19 32 chr20 5933644 5933953 -66219929 - AluSx SINE Alu -7 305 1 555 261 6 22 chr20 5934006 5934186 -66219696 + L1ME3A LINE L1 5989 6165 -5 315 367 14 14 chr20 5935004 5935151 -66218731 - MIR3 SINE MIR -24 184 38 2637 102 8 8 chr20 5935343 5935697 -66218185 - THE1A LTR MaLR 0 355 2 2372 42 0 17 chr20 5935716 5936036 -66217846 - AluY SINE Alu 0 315 1 26 30 0 0 chr20 5936036 5936069 -66217813 + AT_rich Low_complexity Low_complexity 1 33 0 259 295 77 0 chr20 5936168 5936246 -66217636 - L2 LINE L2 -25 3247 3164 21 57 0 0 chr20 5936728 5936763 -66217119 + AT_rich Low_complexity Low_complexity 1 35 0 204 319 76 17 chr20 5936801 5936920 -66216962 - L3 LINE CR1 -315 1262 1137 28 48 0 0 chr20 5937008 5937050 -66216832 + AT_rich Low_complexity Low_complexity 1 42 0 191 39 39 59 chr20 5937120 5937171 -66216711 + (TTAAA)n Simple_repeat Simple_repeat 1 50 0 22 0 0 0 chr20 5937171 5937193 -66216689 + AT_rich Low_complexity Low_complexity 1 22 0 184 359 39 0 chr20 5937277 5937380 -66216502 + L3 LINE CR1 1137 1243 -334 252 265 31 20 chr20 5937385 5937483 -66216399 - LTR67 LTR ERVL 0 557 459 243 302 147 9 chr20 5937816 5937932 -66215950 + L2 LINE L2 3137 3268 -4 226 339 52 9 chr20 5937950 5938065 -66215817 + L3 LINE CR1 1283 1402 -175 357 305 116 12 chr20 5938139 5938303 -66215579 + MLT1K LTR MaLR 31 211 -377 431 303 49 6 chr20 5938635 5938797 -66215085 + MER117 DNA MER1_type 29 197 0 720 208 13 0 chr20 5938847 5939001 -66214881 - MER3 DNA MER1_type 0 2624 2469 470 177 0 0 chr20 5938999 5939078 -66214804 - MER3 DNA MER1_type -92 117 39 * 331 299 24 24 chr20 5939078 5939205 -66214677 - MIR3 SINE MIR -12 196 70 2535 186 38 30 chr20 5939255 5939756 -66214126 + MLT1D LTR MaLR 1 505 0 21 0 0 0 chr20 5940569 5940590 -66213292 + AT_rich Low_complexity Low_complexity 1 21 0 414 289 44 13 chr20 5940650 5940809 -66213073 - MIR3 SINE MIR -11 197 34 850 294 82 8 chr20 5941411 5941765 -66212117 + L1M4 LINE L1 4970 5349 -797 2343 93 0 3 chr20 5942077 5942378 -66211504 + AluY SINE Alu 1 300 -11 577 166 83 78 chr20 5942382 5942526 -66211356 + Charlie2 DNA MER1_type 2654 2801 -61 2187 165 40 3 chr20 5942526 5942878 -66211004 - MLT1A1 LTR MaLR 0 365 1 577 166 83 78 chr20 5942878 5942938 -66210944 + Charlie2 DNA MER1_type 2801 2859 -3 2445 73 0 0 chr20 5943574 5943877 -66210005 - AluY SINE Alu -8 303 1 200 256 0 0 chr20 5944229 5944272 -66209610 - L3 LINE CR1 -3 1574 1532 540 248 88 44 chr20 5944653 5944792 -66209090 + MIR SINE MIR 24 178 -84 2412 219 56 19 chr20 5944792 5945312 -66208570 + MLT1F LTR MaLR 4 542 0 540 248 88 44 chr20 5945312 5945398 -66208484 + MIR SINE MIR 178 259 -3 27 29 0 0 chr20 5945837 5945871 -66208011 + AT_rich Low_complexity Low_complexity 1 34 0 336 248 103 8 chr20 5946459 5946576 -66207306 - MIR SINE MIR -75 187 60 590 135 198 18 chr20 5946681 5946792 -66207090 + FLAM_C SINE Alu 1 131 -2 278 111 111 0 chr20 5946814 5946868 -66207014 - L1MB1 LINE L1 0 6168 6109 5196 127 10 6 chr20 5946906 5947623 -66206259 - MER72 LTR ERV1 0 722 3 1058 173 0 0 chr20 5947773 5947941 -66205941 + LTR54 LTR ERV1 1 168 -342 2327 184 108 30 chr20 5947978 5948515 -66205367 + LTR8 LTR ERV1 113 691 0 518 202 32 0 chr20 5948520 5948644 -66205238 + LTR54B LTR ERV1 365 492 -6 2574 158 40 40 chr20 5948779 5949285 -66204597 - MER34C LTR ERV1 -79 506 1 2272 105 3 0 chr20 5949729 5950025 -66203857 - AluSg SINE Alu -13 297 1 2625 166 66 130 chr20 5950254 5951031 -66202851 - LTR8A LTR ERV1 0 727 1 1995 151 169 17 chr20 5951065 5951468 -66202414 - MER31B LTR ERV1 0 466 3 257 241 69 23 chr20 5951760 5951847 -66202035 + L1ME3A LINE L1 5970 6060 -110 1896 128 35 25 chr20 5952030 5952312 -66201570 + THE1B LTR MaLR 80 364 0 511 333 56 17 chr20 5952314 5952725 -66201157 + L1M4 LINE L1 4743 5169 -977 652 226 99 32 chr20 5952791 5953012 -66200870 + L2 LINE L2 1342 1577 -1737 4124 139 77 9 chr20 5953022 5953682 -66200200 + MER39 LTR ERV1 3 707 0 1663 275 125 27 chr20 5953711 5953997 -66199885 + L2 LINE L2 2244 2501 -812 1954 146 3 3 chr20 5953997 5954284 -66199598 + AluJo SINE Alu 1 287 -25 279 0 0 0 chr20 5954285 5954316 -66199566 + (CA)n Simple_repeat Simple_repeat 2 32 0 1663 275 125 27 chr20 5954316 5954868 -66199014 + L2 LINE L2 2500 3162 -151 275 253 0 40 chr20 5956020 5956095 -66197787 - L1MD2 LINE L1 -262 6097 6026 1613 179 137 23 chr20 5956096 5956482 -66197400 - MER45B DNA AcHobo 0 1040 611 396 221 176 22 chr20 5956958 5957094 -66196788 + MIR SINE MIR 3 159 -103 351 190 220 0 chr20 5957106 5957206 -66196676 - L1ME3A LINE L1 -1 6169 6048 355 233 14 0 chr20 5957230 5957303 -66196579 + MIR SINE MIR 168 241 -21 23 0 0 0 chr20 5958729 5958752 -66195130 + AT_rich Low_complexity Low_complexity 1 23 0 180 77 0 0 chr20 5958831 5958857 -66195025 + (TG)n Simple_repeat Simple_repeat 2 27 0 1166 274 100 52 chr20 5959592 5960091 -66193791 + MLT1G1 LTR MaLR 73 595 0 801 189 8 0 chr20 5961080 5961207 -66192675 - FLAM_C SINE Alu -14 129 2 198 244 35 58 chr20 5961398 5961484 -66192398 + MIR SINE MIR 173 256 -6 256 271 8 17 chr20 5961519 5961637 -66192245 + (TA)n Simple_repeat Simple_repeat 1 117 0 186 133 0 0 chr20 5962031 5962061 -66191821 + (ATG)n Simple_repeat Simple_repeat 3 32 0 183 288 51 0 chr20 5962065 5962124 -66191758 - MIR SINE MIR -8 254 193 193 318 162 26 chr20 5962160 5962314 -66191568 - MIR3 SINE MIR -17 191 17 235 176 39 20 chr20 5962468 5962519 -66191363 + L1ME2 LINE L1 5998 6049 -115 2198 100 0 61 chr20 5962525 5962855 -66191027 + AluSx SINE Alu 1 310 -2 241 248 15 128 chr20 5962860 5962993 -66190889 + L1ME2 LINE L1 6038 6155 -9 493 108 14 0 chr20 5963058 5963132 -66190750 - MSTB1 LTR MaLR 0 426 352 4902 14 0 0 chr20 5963132 5964037 -66189845 - L1P1 LINE L1 -422 5733 4829 3715 17 0 0 chr20 5964036 5964453 -66189429 + L1HS LINE L1 5739 6155 0 * 24 0 0 0 chr20 5964453 5964477 -66189405 + AT_rich Low_complexity Low_complexity 1 24 0 1141 165 151 58 chr20 5964477 5964904 -66188978 - MSTB1 LTR MaLR -55 377 1 21 36 0 0 chr20 5965297 5965325 -66188557 + AT_rich Low_complexity Low_complexity 1 28 0 15532 158 33 17 chr20 5966033 5968344 -66185538 + L1MA4A LINE L1 857 3131 -3874 858 165 0 15 chr20 5968344 5968477 -66185405 + FLAM_C SINE Alu 1 131 -2 15532 158 33 17 chr20 5968477 5970204 -66183678 + L1MA4A LINE L1 3131 4830 -2175 2271 113 0 3 chr20 5970204 5970504 -66183378 + AluSc SINE Alu 1 299 -10 15532 158 33 17 chr20 5970504 5972513 -66181369 + L1MA4A LINE L1 4830 7003 -2 485 284 152 52 chr20 5972557 5973426 -66180456 + L1 LINE L1 2187 3142 -3004 368 285 85 41 chr20 5973440 5973686 -66180196 + L1 LINE L1 3195 3451 -2695 1141 287 6 33 chr20 5974107 5974473 -66179409 + MER90 LTR ERV1 258 613 -1 1800 181 10 0 chr20 5974588 5974897 -66178985 + AluJb SINE Alu 1 312 0 181 216 27 0 chr20 5975483 5975520 -66178362 - L2 LINE L2 -25 3247 3210 397 326 52 17 chr20 5975529 5975589 -66178293 - MER5A DNA MER1_type -3 186 130 1743 181 3 30 chr20 5975589 5975893 -66177989 - AluJo SINE Alu -16 296 1 397 326 52 17 chr20 5975893 5976004 -66177878 - MER5A DNA MER1_type -59 130 9 304 308 115 0 chr20 5976044 5976148 -66177734 + MER5B DNA MER1_type 1 116 -62 390 331 51 6 chr20 5976181 5976338 -66177544 - MIR SINE MIR -94 168 5 5712 55 1 12 chr20 5977010 5977696 -66176186 - L1PA7 LINE L1 0 6154 5476 8849 80 4 2 chr20 5977700 5978968 -66174914 + L1PA7 LINE L1 4214 5482 -690 464 262 32 24 chr20 5980250 5980376 -66173506 + MER5B DNA MER1_type 4 130 -48 816 193 17 33 chr20 5980382 5980563 -66173319 - MER5B DNA MER1_type 0 178 1 265 86 0 0 chr20 5982669 5982704 -66171178 + U1 snRNA snRNA 1 35 -130 260 367 148 33 chr20 5982814 5983084 -66170798 + L2 LINE L2 2886 3186 -86 688 265 101 14 chr20 5984152 5984502 -66169380 + LTR33 LTR ERVL 49 513 -8 190 306 24 47 chr20 5984916 5985001 -66168881 + L2 LINE L2 2890 2972 -300 2323 148 98 25 chr20 5985205 5985604 -66168278 - MSTA LTR MaLR 0 428 1 9150 158 27 61 chr20 5985604 5987312 -66166570 - MSTA-int LTR MaLR 0 1651 2 51 17 0 0 chr20 5987382 5987440 -66166442 + AT_rich Low_complexity Low_complexity 1 58 0 2268 129 59 38 chr20 5987440 5987812 -66166070 - MSTA LTR MaLR -48 380 1 1229 172 89 41 chr20 5988182 5988628 -66165254 + LTR55 LTR ERV 1 519 -29 818 316 147 41 chr20 5989554 5990212 -66163670 + L2 LINE L2 252 979 -2335 323 244 206 8 chr20 5990601 5990732 -66163150 + MIR SINE MIR 56 212 -50 215 225 14 0 chr20 5990850 5990921 -66162961 + (TGAA)n Simple_repeat Simple_repeat 3 74 0 386 321 23 0 chr20 5991088 5991219 -66162663 - MIR SINE MIR -70 192 59 399 207 23 0 chr20 5991291 5991378 -66162504 - LTR16A LTR ERVL -218 232 144 4433 168 77 37 chr20 5992120 5992949 -66160933 - MER21B LTR ERV1 0 863 2 1683 100 4 13 chr20 5993135 5993365 -66160517 + AluSx SINE Alu 1 228 -84 24 0 0 0 chr20 5993557 5993581 -66160301 + AT_rich Low_complexity Low_complexity 1 24 0 533 206 18 88 chr20 5994202 5994372 -66159510 - L1ME3 LINE L1 -2 6160 6003 263 360 202 0 chr20 5994928 5995131 -66158751 - MIR SINE MIR -5 257 14 1819 194 93 63 chr20 5996105 5996248 -66157634 + MLT2B1 LTR ERVL 1 138 -382 2284 120 37 35 chr20 5996248 5996622 -66157260 + THE1C LTR MaLR 1 375 0 1819 194 93 63 chr20 5996622 5996983 -66156899 + MLT2B1 LTR ERVL 138 520 0 499 218 0 0 chr20 5997075 5997176 -66156706 - MER5A DNA MER1_type -80 109 9 1461 258 52 31 chr20 5997886 5998331 -66155551 - MER115 DNA AcHobo -4 689 236 2742 124 48 10 chr20 5998641 5999053 -66154829 - MSTA LTR MaLR 0 428 1 247 316 0 13 chr20 5999589 5999668 -66154214 + L2 LINE L2 3173 3250 -22 316 257 65 41 chr20 5999786 6000002 -66153880 + MLT1H LTR MaLR 19 247 -162 1376 177 52 72 chr20 6000099 6000404 -66153478 + AluJo SINE Alu 1 299 -13 257 222 14 17 chr20 6000426 6000518 -66153364 + MLT1J2 LTR MaLR 364 624 -2 10566 25 1 0 chr20 6000755 6002743 -66151139 - L1PA3 LINE L1 0 6155 4167 2510 123 9 61 chr20 6002744 6003080 -66150802 - MER34B LTR ERV1 -163 402 91 2231 115 0 13 chr20 6003080 6003385 -66150497 - AluSx SINE Alu -11 301 1 2510 123 9 61 chr20 6003385 6003472 -66150410 - MER34B LTR ERV1 -474 91 1 184 143 0 24 chr20 6003588 6003630 -66150252 + L2 LINE L2 3273 3313 0 339 224 122 0 chr20 6003653 6003760 -66150122 - MIR3 SINE MIR -49 159 40 323 286 0 0 chr20 6003819 6003896 -66149986 + MER94 DNA DNA 2 78 -56 5582 153 16 19 chr20 6003896 6004014 -66149868 + L1PB3 LINE L1 4793 4910 -1244 2380 93 6 0 chr20 6004014 6004325 -66149557 - AluSp SINE Alu 0 313 1 5582 153 16 19 chr20 6004325 6005582 -66148300 + L1PB3 LINE L1 4910 6153 -1 2062 147 7 85 chr20 6005684 6005871 -66148011 + MLT1B LTR MaLR 1 138 -252 1598 183 52 3 chr20 6005871 6006161 -66147721 + AluJb SINE Alu 5 308 -4 2062 147 7 85 chr20 6006161 6006396 -66147486 + MLT1B LTR MaLR 138 390 0 837 308 61 8 chr20 6006521 6006881 -66147001 + MLT2F LTR ERVL 4 382 -281 * 1791 175 64 63 chr20 6006875 6007277 -66146605 - MLT1D LTR MaLR -82 385 3 566 292 139 17 chr20 6007609 6007962 -66145920 + HAL1 LINE L1 2074 2469 -38 2240 114 0 64 chr20 6008988 6009348 -66144534 - MER1B DNA MER1_type 0 337 1 2273 102 0 0 chr20 6010601 6010908 -66142974 + AluSx SINE Alu 1 307 0 475 285 50 53 chr20 6011057 6011284 -66142598 - MIR SINE MIR -14 248 22 1129 209 0 5 chr20 6011558 6011769 -66142113 + MER63A DNA MER1_type 1 210 0 2095 139 0 3 chr20 6012082 6012385 -66141497 + AluSx SINE Alu 1 302 -10 2412 103 0 0 chr20 6013189 6013501 -66140381 - AluSx SINE Alu 0 312 1 2389 173 48 52 chr20 6015713 6016229 -66137653 - MLT2B2 LTR ERVL 0 515 2 743 164 0 16 chr20 6018354 6018482 -66135400 + FLAM_C SINE Alu 1 126 -17 433 305 108 0 chr20 6018684 6018851 -66135031 + MIR SINE MIR 4 188 -74 3773 221 73 44 chr20 6019100 6019816 -66134066 - L1MC3 LINE L1 0 7807 7113 192 97 0 0 chr20 6019816 6019847 -66134035 + (TTTA)n Simple_repeat Simple_repeat 4 34 0 3773 221 73 44 chr20 6019847 6020580 -66133302 - L1MC3 LINE L1 -694 7113 6403 342 0 0 0 chr20 6020580 6020618 -66133264 + (TC)n Simple_repeat Simple_repeat 2 39 0 * 369 0 0 0 chr20 6020617 6020658 -66133224 + (TA)n Simple_repeat Simple_repeat 1 41 0 3773 221 73 44 chr20 6020618 6020812 -66133070 - L1MC3 LINE L1 -1404 6403 6272 2253 124 0 0 chr20 6021096 6021395 -66132487 + AluSx SINE Alu 1 299 -13 7734 129 2 11 chr20 6021653 6022630 -66131252 - L1PA10 LINE L1 0 6168 5184 2283 120 0 3 chr20 6022630 6022938 -66130944 - AluSg SINE Alu -3 307 1 7734 129 2 11 chr20 6022938 6023946 -66129936 - L1PA10 LINE L1 -984 5184 4185 5657 144 1 7 chr20 6023946 6024868 -66129014 + L1PA10 LINE L1 3261 4177 -1969 2155 128 103 30 chr20 6025964 6026363 -66127519 + MSTA LTR MaLR 1 428 0 22 70 0 0 chr20 6026888 6026931 -66126951 + AT_rich Low_complexity Low_complexity 1 43 0 216 182 23 0 chr20 6027548 6027592 -66126290 + MIR SINE MIR 108 152 -56 2114 217 97 4 chr20 6028500 6028984 -66124898 - MLT1F LTR MaLR -13 529 1 2138 117 0 0 chr20 6029909 6030222 -66123660 - AluSg SINE Alu 0 313 1 186 289 12 36 chr20 6030328 6030411 -66123471 - MIR SINE MIR -56 206 126 34 42 0 0 chr20 6030621 6030669 -66123213 + AT_rich Low_complexity Low_complexity 1 48 0 212 274 69 10 chr20 6031255 6031357 -66122525 - MIR SINE MIR -65 143 36 493 107 0 12 chr20 6031449 6031533 -66122349 - Alu SINE Alu 0 312 230 2647 153 35 31 chr20 6032377 6032806 -66121076 - LTR34 LTR ERV1 0 699 266 2217 117 0 16 chr20 6032806 6032943 -66120939 + AluSx SINE Alu 1 139 -173 2281 116 10 0 chr20 6032943 6033245 -66120637 + AluSq SINE Alu 1 305 -8 2217 117 0 16 chr20 6033245 6033414 -66120468 + AluSx SINE Alu 139 302 -10 2647 153 35 31 chr20 6033414 6033466 -66120416 - LTR34 LTR ERV1 -433 266 216 1669 174 17 17 chr20 6033466 6033760 -66120122 - MER41D LTR ERV1 0 557 264 667 143 29 0 chr20 6033762 6033867 -66120015 + FLAM_C SINE Alu 11 118 -25 252 156 0 0 chr20 6033891 6033914 -66119968 + A-rich Low_complexity Low_complexity 1 23 -22 2542 68 0 0 chr20 6033914 6034225 -66119657 + AluY SINE Alu 1 311 0 252 156 0 0 chr20 6034225 6034246 -66119636 + A-rich Low_complexity Low_complexity 22 45 0 1509 185 9 56 chr20 6034251 6034570 -66119312 + AluJb SINE Alu 1 304 -8 320 176 15 0 chr20 6034577 6034645 -66119237 + GA-rich Low_complexity Low_complexity 3 71 0 1781 138 4 0 chr20 6034647 6034916 -66118966 - MER41D LTR ERV1 -283 274 5 1347 106 63 0 chr20 6034913 6035120 -66118762 - LTR34 LTR ERV1 -479 220 1 * 204 40 0 0 chr20 6035353 6035378 -66118504 + (CCCCCT)n Simple_repeat Simple_repeat 4 28 0 6352 61 5 290 chr20 6035382 6037213 -66116669 + SVA Other Other 61 1369 -17 414 0 0 0 chr20 6037220 6037266 -66116616 + (TA)n Simple_repeat Simple_repeat 2 47 0 7340 124 41 65 chr20 6037292 6037658 -66116224 - LTR49-int LTR ERV1 -352 5979 5606 2215 106 3 0 chr20 6037658 6037941 -66115941 + AluSx SINE Alu 1 284 -28 7340 124 41 65 chr20 6037941 6038167 -66115715 - LTR49-int LTR ERV1 -725 5606 5376 1460 178 94 7 chr20 6038167 6038443 -66115439 - AluJo SINE Alu 0 302 3 7340 124 41 65 chr20 6038443 6038590 -66115292 - LTR49-int LTR ERV1 -955 5376 5227 1834 160 3 20 chr20 6038590 6038896 -66114986 + AluJb SINE Alu 1 301 -11 7340 124 41 65 chr20 6038896 6039326 -66114556 - LTR49-int LTR ERV1 -1104 5227 4788 2397 94 0 3 chr20 6039326 6039623 -66114259 + AluSx SINE Alu 1 296 -16 7340 124 41 65 chr20 6039623 6039769 -66114113 - LTR49-int LTR ERV1 -1543 4788 4694 1775 179 7 3 chr20 6039769 6040070 -66113812 - AluJb SINE Alu -10 302 1 7340 124 41 65 chr20 6040070 6040145 -66113737 - LTR49-int LTR ERV1 -1637 4694 4619 31490 111 15 56 chr20 6040145 6041287 -66112595 - L1PA8 LINE L1 -2 6170 4982 2302 113 0 0 chr20 6041287 6041587 -66112295 - AluSq SINE Alu -13 300 1 31490 111 15 56 chr20 6041587 6046883 -66106999 - L1PA8 LINE L1 -1190 4982 7 3379 129 19 19 chr20 6046885 6047480 -66106402 - LTR49-int LTR ERV1 -1700 4631 4037 1427 171 24 120 chr20 6047534 6048145 -66105737 + MER52A LTR ERV1 660 1349 -406 325 238 14 61 chr20 6048124 6048271 -66105611 + LTR28 LTR ERV1 577 716 -304 * 2087 217 65 46 chr20 6048245 6048784 -66105098 + MER52A LTR ERV1 1207 1755 0 330 305 61 12 chr20 6049858 6050022 -66103860 - MIR SINE MIR 0 262 91 201 341 0 33 chr20 6050112 6050203 -66103679 - MER5A DNA MER1_type -44 145 58 755 255 62 42 chr20 6050241 6050478 -66103404 + MLT1G1 LTR MaLR 4 198 -369 310 142 19 213 chr20 6050577 6050650 -66103232 - L1ME3A LINE L1 -18 6152 6123 2384 106 0 6 chr20 6050650 6050961 -66102921 - AluSq SINE Alu -4 309 1 310 142 19 213 chr20 6050961 6051042 -66102840 - L1ME3A LINE L1 -47 6123 6028 * 3437 154 53 44 chr20 6051008 6051765 -66102117 + L1MB3 LINE L1 5259 6016 -167 196 271 94 0 chr20 6051786 6051871 -66102011 + MIR SINE MIR 40 132 -76 1144 166 0 44 chr20 6051939 6052144 -66101738 + AluJb SINE Alu 111 306 -6 325 331 48 14 chr20 6052787 6052932 -66100950 + MER5B DNA MER1_type 17 166 -12 221 232 0 93 chr20 6052998 6053149 -66100733 + (CACCAT)n Simple_repeat Simple_repeat 4 140 0 468 203 198 56 chr20 6055225 6055379 -66098503 - ORSL DNA AcHobo -9 266 135 2136 110 7 0 chr20 6055379 6055671 -66098211 - AluY SINE Alu -16 295 2 468 203 198 56 chr20 6055671 6055748 -66098134 - ORSL DNA AcHobo -140 135 2 193 284 20 69 chr20 6055800 6055902 -66097980 - L2 LINE L2 -2111 1203 1107 375 281 79 9 chr20 6058112 6058226 -66095656 + MIR SINE MIR 45 166 -96 7395 51 1 0 chr20 6059049 6060208 -66093674 + L1PA5 LINE L1 4995 6154 0 227 304 83 83 chr20 6060661 6060937 -66092945 - L2 LINE L2 -30 3242 2967 2182 120 7 13 chr20 6061091 6061391 -66092491 + AluSx SINE Alu 1 298 -14 22 0 0 0 chr20 6061930 6061952 -66091930 + AT_rich Low_complexity Low_complexity 1 22 0 782 196 0 7 chr20 6062094 6062232 -66091650 - AluJb SINE Alu -18 294 158 2200 173 40 43 chr20 6062232 6062378 -66091504 + L1M4 LINE L1 4973 5118 -1066 1696 160 0 67 chr20 6062378 6062691 -66091191 + AluJo SINE Alu 1 292 -20 2200 173 40 43 chr20 6062691 6063150 -66090732 + L1M4 LINE L1 5118 5577 -607 1944 155 3 16 chr20 6063150 6063454 -66090428 + AluJb SINE Alu 1 300 -12 2200 173 40 43 chr20 6063454 6063520 -66090362 + L1M4 LINE L1 5577 5642 -542 2286 88 3 3 chr20 6063520 6063832 -66090050 + AluSq SINE Alu 1 312 0 2200 173 40 43 chr20 6063832 6064009 -66089873 + L1M4 LINE L1 5642 5819 -365 267 254 15 15 chr20 6064014 6064081 -66089801 + AluS SINE Alu 1 67 -236 253 123 154 46 chr20 6064192 6064257 -66089625 - MER51A LTR ERV1 -94 540 469 546 270 8 0 chr20 6064532 6064658 -66089224 - MER89-int LTR ERV1 0 7816 7690 1104 318 45 37 chr20 6064871 6065673 -66088209 - MER89-int LTR ERV1 -1488 6268 5461 21 0 0 0 chr20 6066850 6066871 -66087011 + GC_rich Low_complexity Low_complexity 1 21 0 329 278 56 56 chr20 6067198 6067342 -66086540 + HAL1 LINE L1 2363 2506 -1 279 321 128 14 chr20 6067639 6067935 -66085947 + LTR16B LTR ERVL 124 453 -11 203 313 83 90 chr20 6069811 6070099 -66083783 - L2 LINE L2 -30 3242 2957 2214 110 0 3 chr20 6070446 6070738 -66083144 - AluSg SINE Alu -14 296 6 32 0 0 0 chr20 6071258 6071290 -66082592 + AT_rich Low_complexity Low_complexity 1 32 0 1268 322 58 7 chr20 6071335 6072180 -66081702 - HERVL40 LTR ERVL -431 5333 4417 2842 314 42 14 chr20 6072198 6073141 -66080741 - HERVL40 LTR ERVL -1947 3707 2703 2485 100 3 0 chr20 6073141 6073452 -66080430 - AluSp SINE Alu -1 312 1 2842 314 42 14 chr20 6073452 6073912 -66079970 - HERVL40 LTR ERVL -2951 2703 2258 2097 201 91 20 chr20 6073927 6074077 -66079805 - REP3 LTR ERV -30 532 394 447 19 0 0 chr20 6074077 6074129 -66079753 + (CA)n Simple_repeat Simple_repeat 2 53 0 2097 201 91 20 chr20 6074129 6074475 -66079407 - REP3 LTR ERV -168 394 1 409 333 0 0 chr20 6074691 6074817 -66079065 - MER89-int LTR ERV1 -406 6395 6270 379 342 54 43 chr20 6075898 6076343 -66077539 - HERVL40 LTR ERVL -2307 3223 2774 290 233 0 0 chr20 6077125 6077185 -66076697 + MER77 LTR ERV1 9 68 -537 52 0 0 0 chr20 6077353 6077405 -66076477 + AT_rich Low_complexity Low_complexity 1 52 0 1191 167 5 10 chr20 6078263 6078502 -66075380 - AluJb SINE Alu 0 330 93 614 192 0 0 chr20 6078568 6078667 -66075215 - AluJb SINE Alu -213 99 1 202 298 138 11 chr20 6078825 6078919 -66074963 + L2 LINE L2 3137 3242 -30 599 175 15 216 chr20 6078964 6079233 -66074649 - MER51A LTR ERV1 0 640 426 295 298 144 33 chr20 6080497 6080796 -66073086 - LTR16B LTR ERVL -9 455 124 180 211 56 100 chr20 6082085 6082175 -66071707 + MIR SINE MIR 63 148 -114 292 299 28 19 chr20 6083401 6083508 -66070374 - MIR SINE MIR -121 141 34 185 281 16 94 chr20 6085706 6085834 -66068048 + L2 LINE L2 1107 1224 -2090 470 197 171 63 chr20 6085860 6085937 -66067945 + ORSL DNA AcHobo 2 69 -206 2249 110 7 0 chr20 6085937 6086245 -66067637 + AluY SINE Alu 2 311 0 470 197 171 63 chr20 6086245 6086301 -66067581 + ORSL DNA AcHobo 69 118 -157 2287 56 42 7 chr20 6086301 6086586 -66067296 + AluY SINE Alu 1 295 -16 470 197 171 63 chr20 6086586 6086690 -66067192 + ORSL DNA AcHobo 118 266 -9 694 153 0 30 chr20 6087855 6087916 -66065966 - L1MB7 LINE L1 -10 6174 6113 1926 120 0 57 chr20 6087916 6088242 -66065640 + AluSx SINE Alu 1 309 0 694 153 0 30 chr20 6088242 6088310 -66065572 - L1MB7 LINE L1 -71 6113 6048 452 167 0 13 chr20 6088318 6088396 -66065486 - FLAM SINE Alu -23 120 44 2328 179 45 34 chr20 6088473 6088711 -66065171 - L1MB7 LINE L1 -366 5818 5584 1704 174 54 7 chr20 6088711 6088892 -66064990 - AluJb SINE Alu 0 312 110 321 47 0 0 chr20 6088892 6088935 -66064947 + (TTTG)n Simple_repeat Simple_repeat 4 46 0 1704 174 54 7 chr20 6088935 6089051 -66064831 - AluJb SINE Alu -202 110 1 2328 179 45 34 chr20 6089051 6089488 -66064394 - L1MB7 LINE L1 -600 5584 5137 1591 152 4 43 chr20 6089506 6089783 -66064099 - AluJo SINE Alu -15 297 32 1099 360 3 33 chr20 6090036 6090339 -66063543 - AluJo SINE Alu -8 294 1 855 310 6 12 chr20 6091793 6091964 -66061918 - AluJb SINE Alu -12 300 131 463 274 0 0 chr20 6091983 6092056 -66061826 + AluS SINE Alu 3 75 -234 756 359 0 40 chr20 6092056 6092254 -66061628 + AluSp SINE Alu 120 309 -4 244 265 0 0 chr20 6093290 6093339 -66060543 + (TG)n Simple_repeat Simple_repeat 2 50 0 1178 281 10 46 chr20 6094649 6094952 -66058930 - AluJb SINE Alu -10 302 11 691 396 12 60 chr20 6095708 6095958 -66057924 - AluJo SINE Alu -20 292 55 1206 313 0 51 chr20 6096088 6096401 -66057481 + AluSx SINE Alu 3 299 -3 789 239 6 34 chr20 6096447 6096623 -66057259 + FRAM SINE Alu 1 167 -9 1211 317 4 15 chr20 6097297 6097556 -66056326 - AluJo SINE Alu -44 268 13 1397 341 0 26 chr20 6097584 6097889 -66055993 - AluSq SINE Alu -16 297 1 182 185 0 0 chr20 6098601 6098628 -66055254 + polypyrimidine Low_complexity Low_complexity 2 28 0 246 114 0 0 chr20 6099584 6099619 -66054263 - AluJo SINE Alu -264 35 1 182 250 0 18 chr20 6099620 6099676 -66054206 - MIR SINE MIR -60 202 148 2156 101 29 0 chr20 6099691 6099969 -66053913 + AluSx SINE Alu 11 296 -16 2234 114 3 3 chr20 6100404 6100702 -66053180 + AluSc SINE Alu 1 298 -11 2289 96 3 0 chr20 6100735 6101027 -66052855 + AluSx SINE Alu 1 293 -19 2243 130 3 0 chr20 6101396 6101704 -66052178 - AluSx SINE Alu -3 309 1 1331 163 45 0 chr20 6102025 6102270 -66051612 - L1 LINE L1 -811 5335 5080 1843 137 10 3 chr20 6102272 6102571 -66051311 + AluSx SINE Alu 1 301 -11 2281 88 0 3 chr20 6102616 6102921 -66050961 + AluSg SINE Alu 1 304 -6 2286 100 0 0 chr20 6103024 6103333 -66050549 - AluSc SINE Alu 0 309 1 2325 100 0 0 chr20 6103336 6103646 -66050236 - AluSx SINE Alu 0 312 3 1098 182 0 0 chr20 6103649 6103847 -66050035 + AluJb SINE Alu 106 303 -9 3638 138 60 31 chr20 6104333 6104623 -66049259 + LTR8 LTR ERV1 1 281 -410 1549 125 0 0 chr20 6104623 6104847 -66049035 + AluSx SINE Alu 54 277 -35 192 40 0 0 chr20 6104847 6104872 -66049010 + (CAA)n Simple_repeat Simple_repeat 3 27 0 3638 138 60 31 chr20 6104872 6105252 -66048630 + LTR8 LTR ERV1 280 691 0 438 316 92 57 chr20 6105540 6105910 -66047972 - L2 LINE L2 0 3272 2890 2162 98 3 0 chr20 6105911 6106233 -66047649 + AluSx SINE Alu 3 312 0 1423 156 240 73 chr20 6106374 6106611 -66047271 + LTR54 LTR ERV1 1 197 -313 1727 144 45 0 chr20 6106611 6106902 -66046980 + AluSx SINE Alu 1 304 -8 1423 156 240 73 chr20 6106902 6107101 -66046781 + LTR54 LTR ERV1 197 510 0 22 0 0 0 chr20 6107227 6107249 -66046633 + AT_rich Low_complexity Low_complexity 1 22 0 2521 33 0 0 chr20 6107259 6107558 -66046324 + AluY SINE Alu 1 299 -12 670 191 0 23 chr20 6107558 6107681 -66046201 - FLAM_C SINE Alu -186 126 5 2174 84 14 0 chr20 6107697 6107994 -66045888 - AluSp SINE Alu -10 303 3 1571 145 27 37 chr20 6107999 6108295 -66045587 - AluJb SINE Alu -19 293 1 847 178 0 6 chr20 6108991 6109154 -66044728 + FRAM SINE Alu 1 162 -14 843 236 52 40 chr20 6109161 6109411 -66044471 - L1MB7 LINE L1 -68 6116 5864 1911 122 0 30 chr20 6109442 6109745 -66044137 - AluSg SINE Alu -16 294 1 2398 171 26 99 chr20 6109802 6110254 -66043628 - MER4D LTR ERV1 0 903 510 2036 145 0 0 chr20 6110254 6110564 -66043318 + AluSx SINE Alu 1 310 -2 2398 171 26 99 chr20 6110564 6110756 -66043126 - MER4D LTR ERV1 -393 510 306 1052 150 6 6 chr20 6110756 6110923 -66042959 - AluSg/x SINE Alu -12 298 132 2074 120 0 13 chr20 6110923 6111239 -66042643 - AluSx SINE Alu 0 312 1 493 132 53 63 chr20 6111243 6111439 -66042443 - MER4D LTR ERV1 -566 347 70 725 139 0 41 chr20 6111464 6111546 -66042336 - FLAM_C SINE Alu -194 118 41 2248 202 48 60 chr20 6111546 6112165 -66041717 + LTR9 LTR ERV1 1 612 0 725 139 0 41 chr20 6112165 6112204 -66041678 - FLAM_C SINE Alu -271 41 2 809 118 14 69 chr20 6112207 6112257 -66041625 - MER4D LTR ERV1 -664 239 188 1996 133 0 0 chr20 6112257 6112551 -66041331 - AluJb SINE Alu -18 294 1 809 118 14 69 chr20 6112551 6112644 -66041238 - MER4D LTR ERV1 -715 188 104 1269 128 63 48 chr20 6112644 6112914 -66040968 - MER4D LTR ERV1 0 903 534 2399 84 0 0 chr20 6112914 6113225 -66040657 + AluSx SINE Alu 1 311 -1 1269 128 63 48 chr20 6113225 6113365 -66040517 - MER4D LTR ERV1 -369 534 398 1936 146 3 1 chr20 6113365 6113673 -66040209 + MER1B DNA MER1_type 1 339 0 2191 110 3 0 chr20 6113689 6113998 -66039884 - AluSp SINE Alu -2 311 2 2063 130 19 6 chr20 6113998 6114320 -66039562 - MER4D LTR ERV1 -505 398 73 807 132 0 8 chr20 6114320 6114441 -66039441 + FLAM_C SINE Alu 12 131 -12 1109 204 71 19 chr20 6114489 6114812 -66039070 - L1M4 LINE L1 -1573 4573 4234 793 182 149 0 chr20 6114819 6114973 -66038909 - AluSp SINE Alu 0 313 137 1270 209 107 133 chr20 6114974 6115201 -66038681 - L1M4 LINE L1 -1903 4243 4012 1748 153 36 23 chr20 6115201 6115509 -66038373 - AluSx SINE Alu 0 312 1 1270 209 107 133 chr20 6115509 6115740 -66038142 - L1M4 LINE L1 -2134 4012 3805 2231 106 0 0 chr20 6115740 6116043 -66037839 - AluSq SINE Alu -10 303 1 1270 209 107 133 chr20 6116043 6116254 -66037628 - L1M4 LINE L1 -2341 3805 3590 491 143 22 0 chr20 6116439 6116530 -66037352 + GA-rich Low_complexity Low_complexity 5 97 0 2091 125 0 7 chr20 6116554 6116859 -66037023 - AluSg SINE Alu -7 303 1 2110 103 3 3 chr20 6117092 6117393 -66036489 - AluSg SINE Alu -9 301 1 1706 144 14 4 chr20 6117399 6117677 -66036205 - AluSx SINE Alu -7 305 25 1646 170 0 24 chr20 6117687 6117981 -66035901 - AluJb SINE Alu -25 287 1 460 185 65 146 chr20 6117984 6118244 -66035638 - L1MC4 LINE L1 0 8042 7804 264 308 142 73 chr20 6118245 6118551 -66035331 - L2 LINE L2 -1611 1703 1419 2145 118 0 0 chr20 6118551 6118855 -66035027 + AluSx SINE Alu 1 304 -8 264 308 142 73 chr20 6118855 6119205 -66034677 - L2 LINE L2 -1895 1419 1002 2901 65 3 0 chr20 6119209 6119576 -66034306 + L1PA8 LINE L1 5805 6172 0 181 286 36 48 chr20 6119722 6119748 -66034134 - MIR SINE MIR -32 230 205 2263 97 0 0 chr20 6119748 6120048 -66033834 - AluSx SINE Alu -12 300 1 181 286 36 48 chr20 6120048 6120105 -66033777 - MIR SINE MIR -57 205 148 2015 101 29 0 chr20 6120120 6120398 -66033484 + AluSx SINE Alu 11 296 -16 2171 104 3 3 chr20 6120833 6121132 -66032750 + AluSc SINE Alu 1 299 -10 2164 72 58 0 chr20 6121165 6121456 -66032426 + AluSp SINE Alu 1 308 -5 212 208 0 75 chr20 6121461 6121483 -66032399 - MIR SINE MIR -92 170 148 2993 121 26 2 chr20 6121483 6121937 -66031945 + MER4C LTR ERV1 1 465 0 212 208 0 75 chr20 6121937 6121967 -66031915 - MIR SINE MIR -114 148 122 2068 102 0 57 chr20 6121967 6122281 -66031601 + AluSx SINE Alu 1 296 -16 337 311 0 11 chr20 6122281 6122371 -66031511 - L1MC4 LINE L1 -1340 6702 6614 * 399 257 76 9 chr20 6122291 6122396 -66031486 + L1MC4 LINE L1 6610 6721 -1321 357 232 24 12 chr20 6122397 6122479 -66031403 - MIR SINE MIR -146 116 34 1348 196 0 33 chr20 6122548 6122824 -66031058 + AluJo SINE Alu 1 267 -45 848 140 0 0 chr20 6123205 6123341 -66030541 - FLAM_C SINE Alu -1 142 7 2125 104 0 25 chr20 6123371 6123688 -66030194 - AluSg SINE Alu -1 309 1 836 134 0 8 chr20 6123925 6124059 -66029823 - AluSq/x SINE Alu -179 133 1 591 216 145 30 chr20 6124630 6124846 -66029036 + MIR SINE MIR 11 250 -12 779 181 0 0 chr20 6124912 6125045 -66028837 - FLAM_C SINE Alu 0 133 1 1512 157 18 28 chr20 6125263 6125578 -66028304 - AluJo SINE Alu 0 312 1 2066 119 3 3 chr20 6126113 6126415 -66027467 - AluSx SINE Alu -10 302 1 264 281 265 22 chr20 6126534 6126719 -66027163 + L2 LINE L2 3029 3258 -14 413 150 0 0 chr20 6126948 6127008 -66026874 - tRNA-Gly-GGA tRNA tRNA -1 74 15 1743 167 7 7 chr20 6127042 6127347 -66026535 - AluJo SINE Alu -7 305 1 14503 120 36 60 chr20 6127563 6127862 -66026020 - Tigger7 DNA MER2_type 0 2487 2182 2370 88 0 0 chr20 6127862 6128167 -66025715 + AluSq SINE Alu 1 305 -8 14503 120 36 60 chr20 6128167 6130004 -66023878 - Tigger7 DNA MER2_type -305 2182 419 2225 106 0 3 chr20 6130004 6130316 -66023566 - AluSq SINE Alu -2 311 1 14503 120 36 60 chr20 6130316 6130726 -66023156 - Tigger7 DNA MER2_type -2068 419 1 905 137 0 0 chr20 6130774 6130913 -66022969 + FLAM_C SINE Alu 5 143 0 195 42 0 0 chr20 6131775 6131799 -66022083 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 513 300 67 38 chr20 6131839 6132049 -66021833 + MIR SINE MIR 47 262 0 2308 93 3 0 chr20 6132062 6132372 -66021510 + AluSq SINE Alu 1 311 -2 2298 113 126 5 chr20 6132594 6132976 -66020906 - MSTA LTR MaLR 0 428 1 193 302 16 0 chr20 6132986 6133049 -66020833 - L3b LINE CR1 -340 1243 1180 1612 153 3 14 chr20 6133186 6133473 -66020409 - AluJo SINE Alu -18 294 11 621 277 79 5 chr20 6133803 6134005 -66019877 + MIR SINE MIR 33 249 -13 2098 95 3 38 chr20 6134064 6134379 -66019503 - AluSx SINE Alu -8 304 1 1015 200 121 17 chr20 6134380 6134620 -66019262 - MLT1A1 LTR MaLR -11 354 90 2064 104 0 0 chr20 6134621 6134908 -66018974 + AluSx SINE Alu 1 287 -25 402 238 65 138 chr20 6135040 6135131 -66018751 - MIR SINE MIR 0 262 166 2194 107 3 0 chr20 6135131 6135429 -66018453 - AluSx SINE Alu -13 299 1 402 238 65 138 chr20 6135429 6135568 -66018314 - MIR SINE MIR -96 166 49 1222 186 79 52 chr20 6135583 6135873 -66018009 - AluJo SINE Alu -14 298 1 225 214 0 114 chr20 6136177 6136247 -66017635 + AluJb SINE Alu 1 62 -240 1954 57 0 42 chr20 6136249 6136512 -66017370 - AluY SINE Alu -4 307 56 1561 141 8 16 chr20 6136514 6136762 -66017120 + AluJb SINE Alu 54 299 -13 1959 142 3 0 chr20 6137061 6137357 -66016525 + AluSx SINE Alu 1 297 -15 2133 125 3 0 chr20 6138107 6138418 -66015464 - AluSx SINE Alu 0 312 1 926 203 0 0 chr20 6139394 6139552 -66014330 + FRAM SINE Alu 3 160 -6 2022 113 0 3 chr20 6139627 6139919 -66013963 - AluSx SINE Alu -21 291 1 2077 116 3 0 chr20 6141361 6141664 -66012218 - AluSx SINE Alu -8 304 1 2227 85 10 3 chr20 6142010 6142316 -66011566 + AluSx SINE Alu 1 308 -4 285 313 49 12 chr20 6142329 6142411 -66011471 - MIR SINE MIR -55 153 68 21 36 0 0 chr20 6142552 6142580 -66011302 + AT_rich Low_complexity Low_complexity 1 28 0 2469 48 3 0 chr20 6142580 6142890 -66010992 - AluY SINE Alu 0 311 1 523 299 62 22 chr20 6143375 6143599 -66010283 - MIR SINE MIR -12 250 18 2310 93 0 0 chr20 6143654 6143954 -66009928 + AluSx SINE Alu 1 300 -12 3259 94 11 18 chr20 6144170 6144435 -66009447 + MER39B LTR ERV1 1 263 -390 1692 174 13 19 chr20 6144435 6144746 -66009136 + AluJo SINE Alu 1 309 -3 3259 94 11 18 chr20 6144746 6144937 -66008945 + MER39B LTR ERV1 263 454 -199 460 215 14 93 chr20 6144943 6145105 -66008777 - L1MDb LINE L1 -5753 656 452 1114 138 64 15 chr20 6145125 6145328 -66008554 + MER39B LTR ERV1 441 653 0 296 157 20 0 chr20 6145801 6145852 -66008030 + L2 LINE L2 3221 3272 0 1895 114 26 19 chr20 6146991 6147298 -66006584 + AluSx SINE Alu 2 310 -2 2256 103 0 0 chr20 6147435 6147735 -66006147 + AluSq SINE Alu 1 300 -13 4600 193 103 29 chr20 6147755 6148588 -66005294 + L1MDb LINE L1 3 773 -5636 2151 101 0 3 chr20 6148588 6148894 -66004988 - AluSx SINE Alu -7 305 1 4600 193 103 29 chr20 6148894 6149021 -66004861 + L1MDb LINE L1 773 889 -5520 1622 189 0 0 chr20 6149021 6149302 -66004580 + AluJo SINE Alu 1 281 -31 4600 193 103 29 chr20 6149302 6149427 -66004455 + L1MDb LINE L1 889 1003 -5406 1843 145 7 3 chr20 6149427 6149731 -66004151 + AluJb SINE Alu 5 309 -3 4600 193 103 29 chr20 6149731 6149760 -66004122 + L1MDb LINE L1 1003 1202 -5207 876 188 4 5 chr20 6149763 6149954 -66003928 + L1M4 LINE L1 5127 5316 -839 2863 176 33 58 chr20 6149962 6150548 -66003334 - L1M3 LINE L1 -634 5537 4938 1750 128 0 0 chr20 6150548 6150806 -66003076 - AluSx SINE Alu 0 312 55 2863 176 33 58 chr20 6150806 6150838 -66003044 - L1M3 LINE L1 -1233 4938 4907 1847 126 0 4 chr20 6150838 6151115 -66002767 - AluSx SINE Alu -36 276 1 2863 176 33 58 chr20 6151115 6151396 -66002486 - L1M3 LINE L1 -1264 4907 4666 2010 109 7 7 chr20 6151876 6152150 -66001732 - AluSq SINE Alu -39 274 1 646 229 6 59 chr20 6152227 6152397 -66001485 + MIR SINE MIR 32 192 -70 2162 121 0 0 chr20 6153097 6153408 -66000474 + AluSx SINE Alu 1 311 0 2250 116 0 10 chr20 6153455 6153765 -66000117 + AluSx SINE Alu 1 307 -5 2555 50 0 35 chr20 6153840 6154157 -65999725 + AluY SINE Alu 1 306 -5 2073 139 0 7 chr20 6154685 6154988 -65998894 + AluJb SINE Alu 1 301 -11 213 203 47 31 chr20 6155300 6155364 -65998518 + GA-rich Low_complexity Low_complexity 4 68 0 1873 166 0 7 chr20 6155419 6155721 -65998161 + AluJo SINE Alu 1 300 -12 965 218 95 93 chr20 6156072 6156445 -65997437 - MLT1H1 LTR MaLR 0 555 184 2446 74 7 0 chr20 6156445 6156742 -65997140 - AluY SINE Alu -12 299 1 965 218 95 93 chr20 6156742 6156753 -65997129 - MLT1H1 LTR MaLR -371 184 175 2164 68 0 4 chr20 6156753 6157018 -65996864 - AluY SINE Alu -7 304 41 965 218 95 93 chr20 6157018 6157042 -65996840 - MLT1H1 LTR MaLR -380 175 153 1902 136 0 60 chr20 6157042 6157358 -65996524 + AluJb SINE Alu 1 297 -15 965 218 95 93 chr20 6157358 6157388 -65996494 - MLT1H1 LTR MaLR -402 153 114 1753 176 0 40 chr20 6157430 6157754 -65996128 - AluJb SINE Alu -1 311 1 301 189 37 0 chr20 6157761 6157825 -65996057 - MLT1H LTR MaLR -409 140 1 1174 145 34 24 chr20 6158144 6158351 -65995531 + MER20 DNA MER1_type 1 209 -10 23 33 0 0 chr20 6158521 6158551 -65995331 + AT_rich Low_complexity Low_complexity 1 30 0 2138 105 27 0 chr20 6158552 6158846 -65995036 + AluSx SINE Alu 1 302 -10 201 303 0 0 chr20 6158945 6159011 -65994871 + (TATG)n Simple_repeat Simple_repeat 2 67 0 335 229 60 0 chr20 6159079 6159162 -65994720 - MLT1I LTR MaLR -8 401 314 2233 115 7 0 chr20 6159212 6159516 -65994366 - AluSq SINE Alu -7 306 1 718 279 32 9 chr20 6160487 6160706 -65993176 + MIR SINE MIR 35 258 -4 192 152 0 0 chr20 6160748 6160781 -65993101 + CT-rich Low_complexity Low_complexity 4 36 0 1058 161 8 3 chr20 6160782 6161021 -65992861 - AluJb SINE Alu -5 307 2 1852 161 16 26 chr20 6161298 6161609 -65992273 - AluJo SINE Alu -4 308 1 2348 93 0 16 chr20 6161729 6162041 -65991841 + AluSc SINE Alu 1 307 -2 1697 132 0 13 chr20 6162169 6162404 -65991478 + AluSx SINE Alu 1 232 -80 2142 99 4 0 chr20 6163310 6163582 -65990300 - AluSp SINE Alu -25 288 16 2177 128 0 0 chr20 6163743 6164041 -65989841 - AluSx SINE Alu -14 298 1 764 207 0 0 chr20 6164170 6164305 -65989577 - AluJo SINE Alu -177 135 1 344 118 59 12 chr20 6165434 6165519 -65988363 + CT-rich Low_complexity Low_complexity 4 92 0 1224 193 57 11 chr20 6165520 6165784 -65988098 - AluJo SINE Alu -8 304 29 1981 125 50 0 chr20 6166140 6166420 -65987462 + AluSg SINE Alu 1 294 -16 299 274 0 12 chr20 6166490 6166574 -65987308 + (CATA)n Simple_repeat Simple_repeat 4 86 0 566 250 83 43 chr20 6166588 6166848 -65987034 - L1ME1 LINE L1 -229 5937 5667 937 161 73 69 chr20 6167797 6168015 -65985867 + MER20 DNA MER1_type 1 219 0 2354 95 0 0 chr20 6168117 6168412 -65985470 + AluSg SINE Alu 1 295 -15 226 318 155 20 chr20 6168499 6168647 -65985235 + MIR3 SINE MIR 34 201 -7 1864 137 41 20 chr20 6168752 6169044 -65984838 + AluSx SINE Alu 1 298 -14 1919 161 0 3 chr20 6169713 6170011 -65983871 + AluJo SINE Alu 1 297 -15 547 262 43 0 chr20 6170032 6170173 -65983709 + MIR SINE MIR 57 203 -59 318 106 0 0 chr20 6170195 6170242 -65983640 + (T)n Simple_repeat Simple_repeat 1 47 0 395 186 39 20 chr20 6170891 6170993 -65982889 - L2 LINE L2 -1 3312 3209 1988 161 0 3 chr20 6171005 6171316 -65982566 - AluJb SINE Alu -2 310 1 2132 115 3 7 chr20 6171346 6171641 -65982241 + AluSx SINE Alu 1 294 -18 2254 112 0 10 chr20 6172082 6172396 -65981486 - AluJb SINE Alu -1 311 1 2005 125 33 10 chr20 6172789 6173093 -65980789 - AluJb SINE Alu -1 311 1 702 225 30 6 chr20 6173316 6173485 -65980397 - MER5B DNA MER1_type -5 173 1 197 274 245 29 chr20 6173493 6173595 -65980287 - MER5A DNA MER1_type 0 189 66 806 223 96 5 chr20 6173610 6173807 -65980075 + MER58C DNA MER1_type 1 215 0 2080 164 0 0 chr20 6173941 6174251 -65979631 + AluSx SINE Alu 3 312 0 27 62 0 0 chr20 6174323 6174371 -65979511 + AT_rich Low_complexity Low_complexity 1 48 0 347 322 27 34 chr20 6174648 6174797 -65979085 - MIR3 SINE MIR -43 165 18 975 244 22 32 chr20 6174899 6174928 -65978954 - L1MEc LINE L1 -5414 982 954 1979 137 10 7 chr20 6174928 6175235 -65978647 + AluJb SINE Alu 1 308 -4 975 244 22 32 chr20 6175235 6175521 -65978361 - L1MEc LINE L1 -5442 954 670 351 0 0 0 chr20 6175535 6175574 -65978308 + (TC)n Simple_repeat Simple_repeat 2 40 0 * 369 0 0 0 chr20 6175573 6175614 -65978268 + (TG)n Simple_repeat Simple_repeat 2 42 0 248 121 0 0 chr20 6175614 6175647 -65978235 - Alu SINE Alu -267 33 1 306 325 16 8 chr20 6175699 6175822 -65978060 - L1MEc LINE L1 -5775 621 498 2189 103 37 0 chr20 6176216 6176516 -65977366 - AluSx SINE Alu -1 311 1 2229 102 22 140 chr20 6176750 6177004 -65976878 - LTR45B LTR ERV1 -91 398 218 2137 131 3 0 chr20 6177004 6177302 -65976580 - AluSx SINE Alu -13 299 1 2229 102 22 140 chr20 6177302 6177497 -65976385 - LTR45B LTR ERV1 -271 218 2 1906 162 0 7 chr20 6177680 6177983 -65975899 + AluJo SINE Alu 1 301 -11 2147 100 19 26 chr20 6178075 6178386 -65975496 - AluSx SINE Alu -3 309 1 475 244 43 0 chr20 6178540 6178655 -65975227 - L2 LINE L2 -5 3267 3148 2215 88 3 11 chr20 6179368 6179676 -65974206 + AluSx SINE Alu 1 306 0 519 204 0 0 chr20 6179758 6179856 -65974026 - MLT1F LTR MaLR -59 508 411 743 283 57 32 chr20 6179911 6180190 -65973692 - MLT1F LTR MaLR -256 286 1 2203 107 0 3 chr20 6180316 6180606 -65973276 + AluSx SINE Alu 1 289 -23 24 0 0 0 chr20 6180606 6180630 -65973252 + AT_rich Low_complexity Low_complexity 1 24 0 201 152 0 0 chr20 6180665 6180698 -65973184 + (TG)n Simple_repeat Simple_repeat 2 34 0 1451 231 49 75 chr20 6180774 6181402 -65972480 + L2 LINE L2 1501 2112 -1202 630 171 120 8 chr20 6181444 6181561 -65972321 - AluSq/x SINE Alu -181 132 3 2309 115 3 0 chr20 6181576 6181888 -65971994 - AluSq SINE Alu 0 313 1 559 108 0 0 chr20 6181888 6181962 -65971920 + MER30 DNA MER1_type 126 199 -31 1231 280 119 8 chr20 6182000 6182708 -65971174 + L2 LINE L2 2522 3313 0 837 203 6 6 chr20 6183735 6183893 -65969989 + FRAM SINE Alu 1 158 -8 631 263 101 10 chr20 6184777 6184986 -65968896 + MIR SINE MIR 2 229 -33 595 240 101 35 chr20 6185174 6185607 -65968275 - LTR33 LTR ERVL 0 521 1 374 326 61 0 chr20 6186354 6186501 -65967381 + L2 LINE L2 3117 3272 0 1783 157 3 14 chr20 6187004 6187316 -65966566 - AluJo SINE Alu 0 309 1 1632 222 150 12 chr20 6188219 6188538 -65965344 + L1ME3A LINE L1 5583 5857 -313 2382 78 3 29 chr20 6188538 6188847 -65965035 + AluSp SINE Alu 1 301 -12 1632 222 150 12 chr20 6188847 6189026 -65964856 + L1ME3A LINE L1 5857 6150 -20 30 0 0 0 chr20 6189062 6189092 -65964790 + AT_rich Low_complexity Low_complexity 1 30 0 22 35 0 0 chr20 6189131 6189160 -65964722 + AT_rich Low_complexity Low_complexity 1 29 0 198 0 0 0 chr20 6189868 6189890 -65963992 + (TC)n Simple_repeat Simple_repeat 1 22 0 354 215 70 82 chr20 6189902 6190060 -65963822 - L1ME4a LINE L1 -24 6097 5942 1766 172 24 0 chr20 6190085 6190381 -65963501 - AluSx SINE Alu -9 303 1 841 181 0 0 chr20 6190615 6190742 -65963140 - FLAM_A SINE Alu -6 127 1 298 146 0 36 chr20 6190882 6190989 -65962893 + L1PA12 LINE L1 6113 6217 0 551 80 60 50 chr20 6191389 6191489 -65962393 - L1PA15 LINE L1 -1 6164 6064 528 140 0 0 chr20 6191756 6191863 -65962019 + (GA)n Simple_repeat Simple_repeat 2 108 0 192 158 0 0 chr20 6191912 6191950 -65961932 + GA-rich Low_complexity Low_complexity 2 39 0 2083 166 46 3 chr20 6192834 6193184 -65960698 - MLT1A1 LTR MaLR 0 365 1 402 277 134 5 chr20 6194605 6194807 -65959075 + L2 LINE L2 2842 3069 -244 692 254 61 4 chr20 6194861 6195089 -65958793 + HAL1 LINE L1 727 967 -1540 275 225 12 25 chr20 6195182 6195262 -65958620 + HAL1 LINE L1 1824 1902 -605 662 175 12 105 chr20 6195348 6195434 -65958448 - Tigger2 DNA MER2_type 0 2718 2654 2866 62 3 11 chr20 6195434 6195806 -65958076 - L1PA11 LINE L1 -1 6173 5805 662 175 12 105 chr20 6195806 6195890 -65957992 - Tigger2 DNA MER2_type -64 2654 2564 * 1406 120 10 0 chr20 6195889 6196097 -65957785 - Tigger2 DNA MER2_type -2508 210 1 836 251 75 61 chr20 6196101 6196591 -65957291 + HAL1 LINE L1 2011 2507 0 2134 110 0 58 chr20 6196619 6196946 -65956936 + AluSx SINE Alu 1 308 -4 571 145 8 8 chr20 6197572 6197689 -65956193 + (TAGA)n Simple_repeat Simple_repeat 4 120 0 515 170 18 45 chr20 6198302 6198414 -65955468 + MIR SINE MIR 31 139 -123 350 314 50 6 chr20 6198809 6198968 -65954914 + LTR67 LTR ERVL 384 549 -8 269 203 29 14 chr20 6198975 6199044 -65954838 + MIR SINE MIR 157 226 -36 231 36 0 0 chr20 6199142 6199170 -65954712 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 181 306 0 32 chr20 6199228 6199290 -65954592 + MER5B DNA MER1_type 17 76 -102 297 0 0 0 chr20 6199311 6199344 -65954538 + (TG)n Simple_repeat Simple_repeat 1 33 0 596 187 0 41 chr20 6199369 6199492 -65954390 - L1ME3 LINE L1 0 6162 6045 2224 80 25 0 chr20 6200236 6200511 -65953371 - AluY SINE Alu -29 282 1 232 190 0 52 chr20 6200511 6200569 -65953313 + AluSg/x SINE Alu 110 164 -138 765 152 8 0 chr20 6200583 6200708 -65953174 + L1PB4 LINE L1 6031 6156 0 2326 91 10 0 chr20 6200711 6201007 -65952875 + AluSg SINE Alu 1 299 -11 954 183 0 0 chr20 6201007 6201160 -65952722 + AluJo/FRAM SINE Alu 134 286 -26 1075 233 24 51 chr20 6201270 6201562 -65952320 + MLT1B LTR MaLR 107 390 0 1026 133 0 0 chr20 6202051 6202201 -65951681 + AluSp/q SINE Alu 157 306 -7 1244 163 124 35 chr20 6202343 6202455 -65951427 + AluSq SINE Alu 1 102 -211 279 0 0 0 chr20 6202455 6202486 -65951396 + (TC)n Simple_repeat Simple_repeat 2 32 0 1244 163 124 35 chr20 6202486 6202655 -65951227 + AluSq SINE Alu 102 307 -6 841 190 8 99 chr20 6202602 6202844 -65951038 + AluJo SINE Alu 88 307 -5 2166 125 0 19 chr20 6203070 6203383 -65950499 - AluSx SINE Alu -3 309 3 1717 175 0 20 chr20 6203387 6203690 -65950192 - AluJb SINE Alu -15 297 1 2121 79 0 4 chr20 6204281 6204558 -65949324 + AluSc SINE Alu 1 276 -33 2356 57 0 7 chr20 6205034 6205333 -65948549 - AluY SINE Alu -14 297 1 295 222 11 67 chr20 6205690 6205780 -65948102 - MLT1H LTR MaLR -60 489 405 758 250 10 47 chr20 6205783 6205975 -65947907 + MLT1E2 LTR MaLR 2 186 -440 522 181 0 0 chr20 6205979 6206062 -65947820 + FLAM_C SINE Alu 36 118 -25 949 211 64 18 chr20 6206063 6206281 -65947601 + MLT1E2 LTR MaLR 232 459 -167 1554 178 87 0 chr20 6206283 6206684 -65947198 - L1M3 LINE L1 -736 5447 5025 265 321 28 0 chr20 6206767 6206876 -65947006 + MLT1H LTR MaLR 33 144 -405 * 893 276 64 24 chr20 6206875 6207168 -65946714 + MLT1H LTR MaLR 20 403 -146 1068 234 103 0 chr20 6207279 6207561 -65946321 - L2 LINE L2 -661 2653 2343 302 79 0 0 chr20 6208206 6208244 -65945638 - Alu SINE Alu -10 290 253 574 190 0 0 chr20 6208244 6208344 -65945538 + AluSg/x SINE Alu 206 305 -7 2475 58 0 3 chr20 6208959 6209268 -65944614 + AluY SINE Alu 2 309 -2 180 0 0 0 chr20 6209608 6209628 -65944254 + (TGG)n Simple_repeat Simple_repeat 1 20 0 1983 119 14 0 chr20 6209628 6209913 -65943969 - AluSx SINE Alu -23 289 1 2387 61 0 3 chr20 6210016 6210313 -65943569 - AluY SINE Alu -15 296 1 2085 103 3 7 chr20 6210349 6210666 -65943216 + AluSp SINE Alu 1 313 0 1708 150 58 69 chr20 6210673 6211052 -65942830 - THE1C LTR MaLR 0 375 1 2165 64 0 3 chr20 6211059 6211470 -65942412 - AluY SINE Alu 0 410 1 383 227 47 16 chr20 6211521 6211649 -65942233 + L1ME4a LINE L1 5969 6100 -21 1618 176 17 10 chr20 6211866 6212168 -65941714 - AluJo SINE Alu -8 304 1 513 265 78 86 chr20 6212216 6212783 -65941099 + L1ME LINE L1 5256 5817 -345 627 289 0 60 chr20 6212854 6213022 -65940860 + MIR SINE MIR 44 198 -64 1776 166 3 13 chr20 6213022 6213329 -65940553 - AluJb SINE Alu -8 304 1 627 289 0 60 chr20 6213329 6213378 -65940504 + MIR SINE MIR 198 248 -14 276 149 0 0 chr20 6213662 6213709 -65940173 + (CA)n Simple_repeat Simple_repeat 1 47 0 1203 187 26 37 chr20 6214102 6214370 -65939512 - AluJo SINE Alu -47 265 1 22 0 0 0 chr20 6214535 6214557 -65939325 + AT_rich Low_complexity Low_complexity 1 22 0 2059 124 0 3 chr20 6214557 6214856 -65939026 + AluSx SINE Alu 1 298 -14 27 29 0 0 chr20 6214958 6214992 -65938890 + AT_rich Low_complexity Low_complexity 1 34 0 2043 119 0 0 chr20 6214994 6215287 -65938595 + AluSx SINE Alu 1 293 -19 837 144 0 43 chr20 6215442 6215581 -65938301 - FLAM_C SINE Alu 0 133 1 738 269 82 32 chr20 6215621 6216053 -65937829 - LTR33 LTR ERVL 0 521 29 2066 123 3 0 chr20 6216142 6216442 -65937440 - AluSq SINE Alu -12 301 1 485 285 29 38 chr20 6216476 6216586 -65937296 - L1MC/D LINE L1 -551 5613 5632 1920 145 0 25 chr20 6216586 6216904 -65936978 + AluSx SINE Alu 1 310 -2 485 285 29 38 chr20 6216904 6217126 -65936756 - L1MC/D LINE L1 -531 5633 5410 2129 152 16 45 chr20 6217787 6218007 -65935875 - MLT1A1 LTR MaLR 0 365 159 2404 85 0 0 chr20 6218007 6218314 -65935568 - AluSp SINE Alu -6 307 1 2129 152 16 45 chr20 6218314 6218469 -65935413 - MLT1A1 LTR MaLR -206 159 1 2207 102 0 16 chr20 6219020 6219335 -65934547 - AluSx SINE Alu -2 310 1 1965 136 0 10 chr20 6219335 6219643 -65934239 - AluSx SINE Alu -7 305 1 23 0 0 0 chr20 6219652 6219675 -65934207 + AT_rich Low_complexity Low_complexity 1 23 0 1764 148 44 7 chr20 6219933 6220231 -65933651 - AluJb SINE Alu 0 312 4 218 362 109 7 chr20 6220307 6220445 -65933437 - L2 LINE L2 -5 3267 3116 703 293 93 42 chr20 6220500 6220909 -65932973 - MLT1H LTR MaLR -5 590 30 339 136 0 0 chr20 6221041 6221100 -65932782 + (TCCC)n Simple_repeat Simple_repeat 1 59 0 1445 115 18 142 chr20 6221101 6221275 -65932607 - AluJo SINE Alu -23 289 174 1554 181 32 3 chr20 6221275 6221557 -65932325 + AluJb SINE Alu 3 292 -20 1445 115 18 142 chr20 6221557 6221712 -65932170 - AluJo SINE Alu -138 174 1 2050 122 0 3 chr20 6221906 6222210 -65931672 + AluSx SINE Alu 1 303 -9 2117 39 0 12 chr20 6222340 6222598 -65931284 - AluY SINE Alu -16 295 41 812 127 8 45 chr20 6222877 6223011 -65930871 - FLAM_C SINE Alu -4 129 1 414 57 0 0 chr20 6223114 6223167 -65930715 + (TATG)n Simple_repeat Simple_repeat 2 54 0 682 211 53 132 chr20 6223227 6223389 -65930493 - MLT1I LTR MaLR -98 311 183 1840 131 6 35 chr20 6223389 6223701 -65930181 + AluSx SINE Alu 1 303 -9 682 211 53 132 chr20 6223701 6223842 -65930040 - MLT1I LTR MaLR -226 183 32 564 243 79 79 chr20 6224033 6224192 -65929690 + MIR SINE MIR 44 202 -60 852 139 106 101 chr20 6224192 6224308 -65929574 + MER3 DNA MER1_type 1 120 -89 1890 94 0 8 chr20 6224308 6224575 -65929307 - AluSx SINE Alu -45 267 3 852 139 106 101 chr20 6224575 6224666 -65929216 + MER3 DNA MER1_type 120 209 0 564 243 79 79 chr20 6224666 6224678 -65929204 + MIR SINE MIR 202 213 -49 1567 202 10 0 chr20 6224678 6224975 -65928907 + AluJb SINE Alu 1 300 -12 564 243 79 79 chr20 6224975 6225016 -65928866 + MIR SINE MIR 212 257 -5 1473 184 112 90 chr20 6225440 6225717 -65928165 - MLT1C LTR MaLR 0 467 175 2165 111 0 10 chr20 6225717 6226024 -65927858 - AluJb SINE Alu -8 304 1 1473 184 112 90 chr20 6226024 6226203 -65927679 - MLT1C LTR MaLR -292 175 1 293 125 42 0 chr20 6226513 6226561 -65927321 + MLT1K LTR MaLR 539 588 0 753 235 45 71 chr20 6226854 6227263 -65926619 + LTR16C LTR ERVL 100 456 -1 364 217 43 52 chr20 6227498 6227566 -65926316 - L1ME4a LINE L1 0 6121 6053 1993 123 7 3 chr20 6227566 6227866 -65926016 + AluSx SINE Alu 1 301 -11 364 217 43 52 chr20 6227866 6227912 -65925970 - L1ME4a LINE L1 -68 6053 6008 1619 145 14 37 chr20 6228512 6228808 -65925074 + AluJb SINE Alu 1 289 -23 1910 204 78 43 chr20 6228816 6229305 -65924577 + MLT1E2 LTR MaLR 114 619 -7 1256 270 62 47 chr20 6229444 6229577 -65924305 - LTR16C LTR ERVL -8 483 353 2057 101 7 7 chr20 6229577 6229873 -65924009 + AluSq SINE Alu 7 302 -11 1870 140 0 23 chr20 6229881 6230189 -65923693 + AluJb SINE Alu 1 301 -11 1256 270 62 47 chr20 6230189 6230517 -65923365 - LTR16C LTR ERVL -144 347 6 574 288 66 26 chr20 6230620 6230786 -65923096 + MIR SINE MIR 13 193 -69 2027 108 0 11 chr20 6230786 6231130 -65922752 - AluSx SINE Alu 0 341 1 574 288 66 26 chr20 6231130 6231188 -65922694 + MIR SINE MIR 193 247 -15 1403 154 32 43 chr20 6231374 6231654 -65922228 + AluJo SINE Alu 15 291 -21 1305 93 6 0 chr20 6231689 6231861 -65922021 + AluSp SINE Alu 85 257 -56 920 228 52 40 chr20 6231962 6232234 -65921648 + Charlie4 DNA MER1_type 18 292 -1669 1725 131 0 72 chr20 6232240 6232572 -65921310 - AluSx SINE Alu 0 310 1 233 266 225 40 chr20 6232689 6232862 -65921020 - MLT1K LTR MaLR -282 306 102 1971 203 43 51 chr20 6232865 6233372 -65920510 - MLT1D LTR MaLR -2 503 1 350 171 0 13 chr20 6233787 6233863 -65920019 + CT-rich Low_complexity Low_complexity 4 78 0 1911 126 4 0 chr20 6233863 6234141 -65919741 - AluSx SINE Alu -33 279 1 444 290 0 0 chr20 6234225 6234349 -65919533 + LTR16C LTR ERVL 357 480 -11 2046 139 0 0 chr20 6234901 6235203 -65918679 + AluSx SINE Alu 1 302 -10 2130 106 0 10 chr20 6235598 6235901 -65917981 + AluSq SINE Alu 1 300 -13 2287 101 0 0 chr20 6236111 6236418 -65917464 + AluSc SINE Alu 3 309 0 1321 226 36 7 chr20 6236533 6236834 -65917048 - AluJb SINE Alu -2 310 1 210 143 0 0 chr20 6236837 6236872 -65917010 + (T)n Simple_repeat Simple_repeat 1 35 0 553 258 168 0 chr20 6236992 6237159 -65916723 - MIR SINE MIR 0 262 68 1797 145 3 11 chr20 6237358 6237641 -65916241 + AluJb SINE Alu 11 291 -21 333 68 0 0 chr20 6237668 6237712 -65916170 + (TTTC)n Simple_repeat Simple_repeat 1 44 0 1969 152 0 3 chr20 6237715 6238025 -65915857 - AluSx SINE Alu -3 309 1 1888 132 3 3 chr20 6238196 6238483 -65915399 - AluJb SINE Alu -25 287 1 2199 105 0 0 chr20 6238498 6238792 -65915090 + AluSg SINE Alu 1 294 -16 1489 109 18 4 chr20 6239096 6239325 -65914557 - AluSg/x SINE Alu -2 310 79 11319 28 3 25 chr20 6239712 6241119 -65912763 + SVA Other Other 5 1380 -6 943 167 194 53 chr20 6241206 6241305 -65912577 + AluSg SINE Alu 1 85 -215 2049 110 3 0 chr20 6241305 6241597 -65912285 - AluSp SINE Alu -4 309 17 943 167 194 53 chr20 6241597 6241760 -65912122 + AluSg SINE Alu 85 300 0 1601 187 10 7 chr20 6242633 6242938 -65910944 - AluJo SINE Alu -6 306 1 2358 147 121 28 chr20 6243017 6243085 -65910797 - MLT1D LTR MaLR 0 505 445 2014 108 3 11 chr20 6243085 6243363 -65910519 + AluSc SINE Alu 1 278 -31 327 25 0 0 chr20 6243363 6243403 -65910479 + (CA)n Simple_repeat Simple_repeat 1 40 0 2358 147 121 28 chr20 6243411 6243804 -65910078 - MLT1D LTR MaLR -60 445 1 1883 147 19 3 chr20 6243828 6244135 -65909747 + AluJb SINE Alu 1 312 0 781 296 71 24 chr20 6244259 6244512 -65909370 + LTR16C LTR ERVL 42 306 -185 857 122 0 8 chr20 6244513 6244644 -65909238 + FLAM_C SINE Alu 1 130 -13 738 240 6 34 chr20 6244675 6244854 -65909028 + LTR16C LTR ERVL 313 486 -5 327 285 50 13 chr20 6244860 6244969 -65908913 - MIR SINE MIR -102 106 8 2229 96 0 3 chr20 6245572 6245884 -65907998 - AluSq SINE Alu -2 311 1 1482 134 22 109 chr20 6245993 6246314 -65907568 - AluJb SINE Alu -11 301 9 604 163 0 0 chr20 6246319 6246411 -65907471 - AluJo SINE Alu -20 292 201 * 789 146 7 35 chr20 6246407 6246551 -65907331 - AluJo SINE Alu -170 142 3 1754 158 0 26 chr20 6247211 6247514 -65906368 - AluJo SINE Alu -13 299 5 2099 110 3 0 chr20 6247533 6247832 -65906050 - AluSx SINE Alu -10 302 3 1451 189 0 25 chr20 6248343 6248673 -65905209 + AluJo SINE Alu 9 331 0 691 182 0 0 chr20 6248687 6248797 -65905085 + FLAM_C SINE Alu 2 111 -32 453 19 0 0 chr20 6248804 6248858 -65905024 + (TAA)n Simple_repeat Simple_repeat 1 54 0 845 111 0 32 chr20 6249841 6249967 -65903915 + FLAM_C SINE Alu 2 123 -10 800 76 0 0 chr20 6249971 6250076 -65903806 + AluY SINE Alu 194 298 -13 2176 95 0 0 chr20 6250082 6250367 -65903515 + AluSg SINE Alu 1 285 -25 288 77 0 0 chr20 6250367 6250406 -65903476 + (CATA)n Simple_repeat Simple_repeat 2 40 0 1857 160 0 0 chr20 6250522 6250822 -65903060 - AluSx SINE Alu -12 300 1 643 291 62 55 chr20 6250850 6251573 -65902309 - L1MEd LINE L1 -4579 1731 971 934 219 109 29 chr20 6251573 6251847 -65902035 + MLT1A2 LTR MaLR 1 296 -78 1565 164 20 40 chr20 6251907 6252211 -65901671 + AluSx SINE Alu 1 298 -14 1730 165 13 3 chr20 6252259 6252609 -65901273 - AluJb SINE Alu 0 353 1 318 271 121 7 chr20 6253341 6253481 -65900401 + L1ME LINE L1 5425 5580 -586 988 205 20 94 chr20 6253767 6254065 -65899817 - MLT1A2 LTR MaLR 0 374 99 1883 106 93 130 chr20 6254068 6254530 -65899352 - Tigger2 DNA MER2_type -3 2715 2271 374 194 0 0 chr20 6254514 6254586 -65899296 - Tigger2 DNA MER2_type -2646 72 1 * 530 268 121 17 chr20 6254695 6254926 -65898956 + LTR16C LTR ERVL 223 477 -14 1968 164 22 43 chr20 6254983 6255128 -65898754 + MLT1A1 LTR MaLR 1 148 -217 1942 154 3 13 chr20 6255128 6255434 -65898448 - AluJb SINE Alu -9 303 1 1968 164 22 43 chr20 6255434 6255659 -65898223 + MLT1A1 LTR MaLR 148 363 -2 2632 65 0 0 chr20 6256067 6256373 -65897509 - AluY SINE Alu -5 306 1 1808 172 30 3 chr20 6256389 6256691 -65897191 - AluSx SINE Alu -2 310 1 1600 130 41 30 chr20 6256889 6257158 -65896724 - AluJb SINE Alu -39 273 2 344 61 0 0 chr20 6257158 6257207 -65896675 + AluSp/q SINE Alu 248 296 -7 1212 292 76 4 chr20 6257861 6258334 -65895548 - LTR33 LTR ERVL -14 507 1 363 127 0 0 chr20 6258598 6258653 -65895229 - MER20 DNA MER1_type -2 217 163 473 282 56 52 chr20 6258708 6258921 -65894961 - MLT1H LTR MaLR -262 287 74 2311 106 3 0 chr20 6259579 6259882 -65894000 + AluSc SINE Alu 1 304 -5 1040 128 37 136 chr20 6259882 6260118 -65893764 - AluJb SINE Alu -23 289 76 2045 109 26 22 chr20 6260127 6260438 -65893444 + AluSx SINE Alu 1 312 0 295 195 0 98 chr20 6260465 6260547 -65893335 - AluJb SINE Alu -223 79 6 923 215 36 10 chr20 6260574 6260769 -65893113 + MIR SINE MIR 12 211 -51 1866 154 0 17 chr20 6260769 6261061 -65892821 + AluJb SINE Alu 1 287 -25 2247 117 0 0 chr20 6261136 6261435 -65892447 - AluSx SINE Alu -13 299 1 29 59 0 15 chr20 6261878 6261916 -65891966 + AT_rich Low_complexity Low_complexity 1 39 -28 2461 84 0 3 chr20 6261916 6262224 -65891658 + AluSg1 SINE Alu 1 307 -2 29 59 0 15 chr20 6262224 6262253 -65891629 + AT_rich Low_complexity Low_complexity 39 67 0 1940 144 7 7 chr20 6262332 6262623 -65891259 + AluJb SINE Alu 13 303 -9 2366 113 0 0 chr20 6262706 6263008 -65890874 - AluSg SINE Alu -8 302 1 2343 127 0 0 chr20 6263667 6263975 -65889907 + AluSx SINE Alu 1 308 -4 22 0 0 0 chr20 6264058 6264080 -65889802 + AT_rich Low_complexity Low_complexity 1 22 0 1946 162 7 7 chr20 6264092 6264400 -65889482 + AluJb SINE Alu 1 308 -4 692 213 24 0 chr20 6264419 6264546 -65889336 + FLAM_A SINE Alu 1 130 -3 2361 97 0 7 chr20 6264546 6264846 -65889036 - AluSq SINE Alu -15 298 1 2429 87 0 22 chr20 6264950 6265261 -65888621 + AluSc SINE Alu 1 304 -5 1243 245 122 57 chr20 6265296 6265855 -65888027 - MLT1G1 LTR MaLR 0 595 1 1262 186 21 0 chr20 6266598 6266835 -65887047 + MLT1D LTR MaLR 1 242 -263 223 164 33 0 chr20 6266846 6266907 -65886975 + GA-rich Low_complexity Low_complexity 2 64 0 21 36 0 0 chr20 6266975 6267003 -65886879 + AT_rich Low_complexity Low_complexity 1 28 0 1990 74 82 0 chr20 6267004 6267260 -65886622 - AluSp SINE Alu -14 299 23 401 109 0 0 chr20 6267260 6267315 -65886567 - Alu SINE Alu -254 56 2 1905 143 20 3 chr20 6267315 6267608 -65886274 - AluJo SINE Alu -14 298 1 480 128 20 4 chr20 6267608 6267759 -65886123 + MLT1D LTR MaLR 295 505 0 1976 138 7 10 chr20 6268115 6268405 -65885477 - AluJb SINE Alu -22 290 2 1493 170 9 88 chr20 6268418 6268736 -65885146 - AluJb SINE Alu -19 293 1 324 162 59 0 chr20 6269087 6269155 -65884727 + LTR16C LTR ERVL 420 491 0 2105 119 13 44 chr20 6269275 6269593 -65884289 - AluSx SINE Alu -4 308 1 192 111 0 0 chr20 6269754 6269790 -65884092 + (CAGA)n Simple_repeat Simple_repeat 2 37 0 255 294 261 0 chr20 6271166 6271285 -65882597 - L2 LINE L2 0 3313 3164 1385 132 38 9 chr20 6271296 6271509 -65882373 + MER20 DNA MER1_type 1 219 0 1186 186 0 0 chr20 6271517 6271705 -65882177 + MER5A DNA MER1_type 1 188 -1 333 223 48 117 chr20 6271790 6271842 -65882040 + MER5A DNA MER1_type 25 68 -121 2524 77 0 0 chr20 6271842 6272153 -65881729 + AluY SINE Alu 1 311 0 333 223 48 117 chr20 6272153 6272203 -65881679 + MER5A DNA MER1_type 68 120 -69 2278 118 7 0 chr20 6272264 6272570 -65881312 + AluSx SINE Alu 1 308 -4 1061 263 84 46 chr20 6273010 6273425 -65880457 + MLT1J LTR MaLR 73 503 -8 2240 131 0 6 chr20 6273853 6274150 -65879732 + AluSx SINE Alu 1 297 -15 390 42 0 0 chr20 6274150 6274198 -65879684 + (CA)n Simple_repeat Simple_repeat 1 48 0 2240 131 0 6 chr20 6274198 6274212 -65879670 + AluSx SINE Alu 297 310 -2 374 204 11 0 chr20 6274397 6274485 -65879397 + GA-rich Low_complexity Low_complexity 3 91 0 2232 133 0 0 chr20 6274973 6275274 -65878608 + AluSx SINE Alu 1 301 -11 1391 156 60 96 chr20 6275284 6275586 -65878296 + AluJb SINE Alu 6 296 -16 517 128 13 0 chr20 6276027 6276105 -65877777 + AluS SINE Alu 221 299 -13 2107 126 7 7 chr20 6276832 6277133 -65876749 - AluSx SINE Alu -11 301 1 2225 121 0 16 chr20 6277451 6277764 -65876118 - AluSx SINE Alu -4 308 1 2366 90 0 0 chr20 6278297 6278597 -65875285 - AluY SINE Alu -11 300 1 403 226 65 40 chr20 6278630 6278754 -65875128 + MIR SINE MIR 61 187 -75 212 275 92 37 chr20 6278761 6278870 -65875012 + MIR SINE MIR 148 262 0 1775 161 18 0 chr20 6278946 6279219 -65874663 + AluJb SINE Alu 1 278 -34 189 0 0 0 chr20 6279223 6279244 -65874638 + (CAA)n Simple_repeat Simple_repeat 1 21 0 1939 138 7 26 chr20 6279246 6279551 -65874331 + AluSx SINE Alu 1 299 -13 1648 180 24 24 chr20 6279962 6280256 -65873626 + AluJo SINE Alu 1 294 -18 4925 146 24 53 chr20 6280360 6280691 -65873191 - L1MA8 LINE L1 -4 6287 5948 2277 125 0 0 chr20 6280691 6280995 -65872887 - AluSx SINE Alu -8 304 1 4925 146 24 53 chr20 6280995 6281231 -65872651 - L1MA8 LINE L1 -343 5948 5707 2256 135 0 0 chr20 6281231 6281542 -65872340 - AluSx SINE Alu -1 311 1 4925 146 24 53 chr20 6281542 6281799 -65872083 - L1MA8 LINE L1 -584 5707 5495 2359 98 0 13 chr20 6281799 6282114 -65871768 - AluSq SINE Alu -2 311 1 4925 146 24 53 chr20 6282114 6282319 -65871563 - L1MA8 LINE L1 -796 5495 5286 21 0 0 0 chr20 6282763 6282784 -65871098 + GC_rich Low_complexity Low_complexity 1 21 0 329 278 56 56 chr20 6283111 6283255 -65870627 + HAL1 LINE L1 2363 2506 -1 279 321 128 14 chr20 6283552 6283848 -65870034 + LTR16B LTR ERVL 124 453 -11 203 313 83 90 chr20 6285724 6286012 -65867870 - L2 LINE L2 -30 3242 2957 2214 110 0 3 chr20 6286359 6286651 -65867231 - AluSg SINE Alu -14 296 6 32 0 0 0 chr20 6287171 6287203 -65866679 + AT_rich Low_complexity Low_complexity 1 32 0 1268 322 58 7 chr20 6287248 6288093 -65865789 - HERVL40 LTR ERVL -431 5333 4417 2842 314 42 14 chr20 6288111 6289054 -65864828 - HERVL40 LTR ERVL -1947 3707 2703 2485 100 3 0 chr20 6289054 6289365 -65864517 - AluSp SINE Alu -1 312 1 2842 314 42 14 chr20 6289365 6289825 -65864057 - HERVL40 LTR ERVL -2951 2703 2258 2097 201 91 20 chr20 6289840 6289990 -65863892 - REP3 LTR ERV -30 532 394 447 19 0 0 chr20 6289990 6290042 -65863840 + (CA)n Simple_repeat Simple_repeat 2 53 0 2097 201 91 20 chr20 6290042 6290388 -65863494 - REP3 LTR ERV -168 394 1 409 333 0 0 chr20 6290604 6290730 -65863152 - MER89-int LTR ERV1 -406 6395 6270 379 342 54 43 chr20 6291811 6292256 -65861626 - HERVL40 LTR ERVL -2307 3223 2774 290 233 0 0 chr20 6293038 6293098 -65860784 + MER77 LTR ERV1 9 68 -537 52 0 0 0 chr20 6293266 6293318 -65860564 + AT_rich Low_complexity Low_complexity 1 52 0 1191 167 5 10 chr20 6294176 6294415 -65859467 - AluJb SINE Alu 0 330 93 614 192 0 0 chr20 6294481 6294580 -65859302 - AluJb SINE Alu -213 99 1 202 298 138 11 chr20 6294738 6294832 -65859050 + L2 LINE L2 3137 3242 -30 599 175 15 216 chr20 6294877 6295146 -65858736 - MER51A LTR ERV1 0 640 426 295 298 144 33 chr20 6296410 6296709 -65857173 - LTR16B LTR ERVL -9 455 124 180 211 56 100 chr20 6297998 6298088 -65855794 + MIR SINE MIR 63 148 -114 292 299 28 19 chr20 6299314 6299421 -65854461 - MIR SINE MIR -121 141 34 185 281 16 94 chr20 6301619 6301747 -65852135 + L2 LINE L2 1107 1224 -2090 470 197 171 63 chr20 6301773 6301850 -65852032 + ORSL DNA AcHobo 2 69 -206 2249 110 7 0 chr20 6301850 6302158 -65851724 + AluY SINE Alu 2 311 0 470 197 171 63 chr20 6302158 6302214 -65851668 + ORSL DNA AcHobo 69 118 -157 2287 56 42 7 chr20 6302214 6302499 -65851383 + AluY SINE Alu 1 295 -16 470 197 171 63 chr20 6302499 6302603 -65851279 + ORSL DNA AcHobo 118 266 -9 694 153 0 30 chr20 6303768 6303829 -65850053 - L1MB7 LINE L1 -10 6174 6113 1926 120 0 57 chr20 6303829 6304155 -65849727 + AluSx SINE Alu 1 309 0 694 153 0 30 chr20 6304155 6304223 -65849659 - L1MB7 LINE L1 -71 6113 6048 452 167 0 13 chr20 6304231 6304309 -65849573 - FLAM SINE Alu -23 120 44 2477 179 42 40 chr20 6304386 6304624 -65849258 - L1MB7 LINE L1 -366 5818 5582 1720 171 54 7 chr20 6304624 6304805 -65849077 - AluJb SINE Alu 0 312 110 321 47 0 0 chr20 6304805 6304848 -65849034 + (TTTG)n Simple_repeat Simple_repeat 4 46 0 1720 171 54 7 chr20 6304848 6304964 -65848918 - AluJb SINE Alu -202 110 1 2477 179 42 40 chr20 6304964 6305419 -65848463 - L1MB7 LINE L1 -602 5582 5129 1884 136 3 39 chr20 6305419 6305727 -65848155 - AluJo SINE Alu -15 297 1 2477 179 42 40 chr20 6305727 6305761 -65848121 - L1MB7 LINE L1 -1055 5129 5097 2392 74 24 0 chr20 6305761 6306057 -65847825 + AluSp SINE Alu 1 303 -10 2477 179 42 40 chr20 6306057 6306184 -65847698 - L1MB7 LINE L1 -1087 5097 4967 871 169 0 0 chr20 6306184 6306326 -65847556 + AluJb SINE Alu 160 301 -11 1657 150 15 4 chr20 6306326 6306586 -65847296 + AluSx SINE Alu 1 263 -49 22 35 0 0 chr20 6306599 6306628 -65847254 + AT_rich Low_complexity Low_complexity 1 29 0 197 262 0 0 chr20 6307559 6307601 -65846281 + L2 LINE L2 3137 3178 -94 2408 100 7 0 chr20 6307604 6307914 -65845968 + AluSq SINE Alu 1 312 -1 251 83 0 21 chr20 6307924 6307972 -65845910 + (CAAG)n Simple_repeat Simple_repeat 2 48 0 876 140 0 22 chr20 6309719 6309855 -65844027 + AluJo/FLAM SINE Alu 1 133 -169 2282 99 3 0 chr20 6309858 6310150 -65843732 + AluSp SINE Alu 1 293 -20 526 182 141 35 chr20 6310323 6310521 -65843361 - LTR16B LTR ERVL 0 464 246 231 221 90 97 chr20 6310952 6311097 -65842785 - HAL1 LINE L1 -1 2506 2363 21 36 0 0 chr20 6312008 6312036 -65841846 + AT_rich Low_complexity Low_complexity 1 28 0 2269 113 3 0 chr20 6312249 6312560 -65841322 - AluSx SINE Alu 0 312 1 2088 128 0 13 chr20 6312569 6312873 -65841009 - AluSx SINE Alu -12 300 1 4388 52 0 0 chr20 6313530 6314065 -65839817 + L1PA5 LINE L1 3567 4101 -2045 * 8082 36 0 0 chr20 6314054 6315015 -65838867 - L1PA4 LINE L1 -892 5254 4294 7472 37 6 0 chr20 6315015 6315899 -65837983 + L1PA4 LINE L1 5257 6154 -1 30 0 0 0 chr20 6315899 6315929 -65837953 + AT_rich Low_complexity Low_complexity 1 30 0 11008 40 3 0 chr20 6315929 6318001 -65835881 + L1PA5 LINE L1 4080 6152 -2 2067 136 0 0 chr20 6318199 6318510 -65835372 + AluSp SINE Alu 4 314 0 14988 123 21 19 chr20 6318510 6319466 -65834416 + MER50-int LTR ERV1 4932 5885 -1320 2146 106 0 7 chr20 6319466 6319770 -65834112 + AluSp SINE Alu 1 302 0 14988 123 21 19 chr20 6319770 6321074 -65832808 + MER50-int LTR ERV1 5885 7197 -8 4407 137 27 16 chr20 6321074 6321777 -65832105 + MER50 LTR ERV1 1 711 -23 663 230 149 30 chr20 6321891 6322190 -65831692 + L1ME LINE L1 5485 5809 -353 1737 174 0 39 chr20 6322514 6322687 -65831195 - AluJb SINE Alu -14 298 141 2366 103 0 3 chr20 6322687 6322988 -65830894 - AluSg SINE Alu -10 300 1 1737 174 0 39 chr20 6322988 6323124 -65830758 - AluJb SINE Alu -171 141 1 1415 161 124 18 chr20 6323127 6323400 -65830482 - AluJo SINE Alu -10 302 1 22 0 0 0 chr20 6323401 6323423 -65830459 + AT_rich Low_complexity Low_complexity 1 22 0 1192 146 92 5 chr20 6323684 6323890 -65829992 + AluJb SINE Alu 87 310 -2 561 68 0 0 chr20 6323892 6323966 -65829916 + (GGAA)n Simple_repeat Simple_repeat 3 76 0 499 218 10 0 chr20 6324168 6324269 -65829613 + FLAM_A SINE Alu 23 124 -18 2334 89 27 0 chr20 6324270 6324563 -65829319 + AluSx SINE Alu 1 301 -11 2240 79 18 0 chr20 6324591 6324910 -65828972 + AluSp SINE Alu 1 324 0 880 246 18 7 chr20 6325721 6326001 -65827881 + L1MC/D LINE L1 2805 3087 -3059 761 150 0 88 chr20 6326011 6326158 -65827724 + FLAM_C SINE Alu 10 143 0 1678 240 48 50 chr20 6326158 6326757 -65827125 + L1MC/D LINE L1 3091 3688 -2458 2184 105 3 16 chr20 6326757 6327061 -65826821 + AluSx SINE Alu 1 300 -12 1739 158 37 10 chr20 6327071 6327369 -65826513 + AluJo SINE Alu 1 306 -6 754 199 18 12 chr20 6327370 6327536 -65826346 + L1MC/D LINE L1 5599 5765 -477 225 0 0 0 chr20 6328278 6328303 -65825579 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 848 110 0 0 chr20 6328307 6328425 -65825457 - FLAM_C SINE Alu -15 118 1 241 307 52 13 chr20 6328589 6328742 -65825140 - MIR SINE MIR -39 223 65 2273 108 13 0 chr20 6329122 6329429 -65824453 - AluSp SINE Alu -2 311 1 1770 133 22 65 chr20 6329495 6329817 -65824065 - AluJo SINE Alu -4 308 1 814 147 0 0 chr20 6329855 6329971 -65823911 - AluJb SINE Alu -196 116 1 1043 296 181 21 chr20 6330157 6330975 -65822907 - L2 LINE L2 -1992 1322 374 972 182 42 0 chr20 6330982 6331174 -65822708 + Charlie5 DNA MER1_type 1 200 -2412 1875 126 3 87 chr20 6331186 6331319 -65822563 + AluJo SINE Alu 1 144 -168 1437 137 166 0 chr20 6331319 6331583 -65822299 + AluSg1 SINE Alu 1 304 0 1875 126 3 87 chr20 6331583 6331782 -65822100 + AluJo SINE Alu 144 306 -6 33 0 0 0 chr20 6332344 6332377 -65821505 + AT_rich Low_complexity Low_complexity 1 33 0 813 138 14 179 chr20 6332388 6332612 -65821270 + Charlie5 DNA MER1_type 2337 2502 -83 1495 186 4 4 chr20 6332612 6332859 -65821023 + AluJb SINE Alu 1 247 -65 813 138 14 179 chr20 6332859 6332931 -65820951 + Charlie5 DNA MER1_type 2502 2584 -1 591 268 71 20 chr20 6332935 6333189 -65820693 - L2 LINE L2 -2961 353 87 907 236 43 40 chr20 6333266 6333345 -65820537 - L2 LINE L2 -775 2539 2462 2489 88 0 0 chr20 6333345 6333653 -65820229 + AluSx SINE Alu 1 308 -4 907 236 43 40 chr20 6333653 6333921 -65819961 - L2 LINE L2 -852 2462 2191 523 183 77 0 chr20 6334665 6334769 -65819113 + FLAM_C SINE Alu 7 118 -25 36 40 0 0 chr20 6334769 6334819 -65819063 + AT_rich Low_complexity Low_complexity 1 50 0 347 284 20 10 chr20 6334884 6334986 -65818896 - MIR SINE MIR -63 145 43 192 125 0 0 chr20 6334991 6335023 -65818859 + (T)n Simple_repeat Simple_repeat 1 32 0 308 250 160 56 chr20 6335036 6335180 -65818702 - L1MC5 LINE L1 -48 7913 7755 270 205 13 93 chr20 6335232 6335383 -65818499 - L1MC5 LINE L1 -195 7766 7628 1184 110 29 131 chr20 6335398 6335643 -65818239 - AluYb8 SINE Alu -15 303 84 755 219 35 42 chr20 6335671 6335959 -65817923 - L1MC5 LINE L1 -366 7595 7310 349 293 23 38 chr20 6336098 6336291 -65817591 - L1MC4 LINE L1 -725 7236 7068 1722 181 13 10 chr20 6336291 6336595 -65817287 + AluJb SINE Alu 2 306 -6 265 187 27 13 chr20 6336600 6336675 -65817207 + GA-rich Low_complexity Low_complexity 3 78 0 642 227 50 69 chr20 6336676 6336993 -65816889 - L1MC5 LINE L1 -887 7074 6764 2202 106 0 26 chr20 6337119 6337421 -65816461 + AluSg SINE Alu 1 294 -16 1754 166 0 7 chr20 6337433 6337716 -65816166 + AluJb SINE Alu 1 281 -31 327 169 17 0 chr20 6338288 6338347 -65815535 + FRAM/FAM SINE Alu 1 59 -107 2952 180 98 52 chr20 6338513 6339208 -65814674 + LTR8A LTR ERV1 1 727 0 2034 128 51 0 chr20 6339473 6339769 -65814113 - AluSx SINE Alu -1 311 1 1886 207 111 47 chr20 6339770 6339905 -65813977 - L1MC/D LINE L1 -743 5403 5278 904 153 70 13 chr20 6339905 6340062 -65813820 - FRAM SINE Alu 0 166 1 1886 207 111 47 chr20 6340062 6340137 -65813745 - L1MC/D LINE L1 -868 5278 5209 1986 157 7 0 chr20 6340137 6340436 -65813446 - AluJb SINE Alu -11 301 1 1886 207 111 47 chr20 6340436 6340592 -65813290 - L1MC/D LINE L1 -937 5209 5064 1361 192 130 0 chr20 6340592 6340853 -65813029 - AluJo SINE Alu -7 295 1 1886 207 111 47 chr20 6340853 6340965 -65812917 - L1MC/D LINE L1 -1082 5064 4961 2324 99 24 0 chr20 6340965 6341259 -65812623 - AluSx SINE Alu -11 301 1 1886 207 111 47 chr20 6341259 6341529 -65812353 - L1MC/D LINE L1 -1185 4961 4642 1964 76 44 0 chr20 6341537 6341786 -65812096 - AluSq SINE Alu -53 260 1 34 42 0 0 chr20 6341871 6341919 -65811963 + AT_rich Low_complexity Low_complexity 1 48 0 434 238 20 79 chr20 6341976 6342178 -65811704 - L2 LINE L2 -893 2421 2232 219 238 25 50 chr20 6343457 6343537 -65810345 - L2 LINE L2 -68 3245 3168 226 333 49 0 chr20 6344249 6344330 -65809552 - L2 LINE L2 -50 3263 3179 25 31 0 0 chr20 6346371 6346403 -65807479 + AT_rich Low_complexity Low_complexity 1 32 0 552 284 47 43 chr20 6347531 6347763 -65806119 + HAL1 LINE L1 1 233 -2274 643 152 24 32 chr20 6348615 6348740 -65805142 + AluJb SINE Alu 182 305 -7 1687 239 144 55 chr20 6348743 6348879 -65805003 + HAL1 LINE L1 971 1094 -1413 1902 141 10 13 chr20 6348879 6349192 -65804690 + AluSx SINE Alu 1 312 0 1687 239 144 55 chr20 6349192 6349890 -65803992 + HAL1 LINE L1 1094 1879 -628 351 296 77 6 chr20 6350390 6350559 -65803323 + L1ME3A LINE L1 5690 5870 -300 236 94 0 0 chr20 6350608 6350640 -65803242 + Alu SINE Alu 181 212 -91 679 101 119 0 chr20 6350642 6350751 -65803131 + AluSg/x SINE Alu 177 298 -14 414 256 68 46 chr20 6350925 6351144 -65802738 + HAL1 LINE L1 2284 2507 0 27 0 0 0 chr20 6351610 6351637 -65802245 + AT_rich Low_complexity Low_complexity 1 27 0 31 26 0 0 chr20 6351941 6351979 -65801903 + AT_rich Low_complexity Low_complexity 1 38 0 310 133 0 0 chr20 6351992 6352037 -65801845 - Alu SINE Alu -258 45 1 13685 130 52 27 chr20 6352037 6352936 -65800946 + Tigger1 DNA MER2_type 35 910 -1508 2303 78 14 0 chr20 6352936 6353103 -65800779 - AluY SINE Alu -11 300 126 189 0 0 0 chr20 6353103 6353124 -65800758 + (TTA)n Simple_repeat Simple_repeat 2 22 0 2303 78 14 0 chr20 6353124 6353252 -65800630 - AluY SINE Alu -185 126 1 13685 130 52 27 chr20 6353252 6354227 -65799655 + Tigger1 DNA MER2_type 910 1859 -559 2134 123 10 3 chr20 6354227 6354535 -65799347 + AluSx SINE Alu 1 310 -2 1955 125 30 20 chr20 6354543 6354846 -65799036 + AluSq SINE Alu 1 306 -7 13685 130 52 27 chr20 6354846 6355186 -65798696 + Tigger1 DNA MER2_type 1865 2323 -95 2370 80 7 0 chr20 6355186 6355472 -65798410 - AluSg SINE Alu -22 288 1 13685 130 52 27 chr20 6355472 6355571 -65798311 + Tigger1 DNA MER2_type 2323 2418 0 416 223 92 159 chr20 6355700 6356014 -65797868 - L2 LINE L2 -4 3309 3017 1127 295 120 13 chr20 6356039 6356661 -65797221 - L2 LINE L2 -410 2904 2137 304 276 38 48 chr20 6356670 6356775 -65797107 - MER5B DNA MER1_type -69 109 6 1940 142 6 22 chr20 6357889 6358205 -65795677 + AluSx SINE Alu 1 311 -1 1496 192 37 0 chr20 6358280 6358551 -65795331 + AluJb SINE Alu 7 287 -25 28 48 0 0 chr20 6358552 6358594 -65795288 + AT_rich Low_complexity Low_complexity 1 42 0 395 246 80 45 chr20 6359131 6359264 -65794618 - MIR3 SINE MIR -30 178 41 523 274 22 22 chr20 6359817 6359996 -65793886 + L2 LINE L2 3135 3313 0 2011 123 7 3 chr20 6361264 6361549 -65792333 - AluSx SINE Alu -25 287 2 242 393 0 0 chr20 6361642 6361726 -65792156 + MIR3 SINE MIR 5 88 -120 2435 64 10 0 chr20 6361951 6362247 -65791635 - AluY SINE Alu -12 299 1 930 211 0 0 chr20 6362473 6362644 -65791238 - AluJb SINE Alu -8 304 134 1320 183 11 53 chr20 6363514 6363799 -65790083 + AluJb SINE Alu 1 273 -39 186 71 0 0 chr20 6363803 6363831 -65790051 + (CA)n Simple_repeat Simple_repeat 1 28 0 1503 189 17 36 chr20 6364196 6364497 -65789385 - AluJo SINE Alu -17 295 1 256 326 136 0 chr20 6365117 6365249 -65788633 - L2 LINE L2 -17 3296 3147 180 243 86 57 chr20 6365344 6365414 -65788468 - MIR SINE MIR -161 101 30 255 152 0 0 chr20 6366531 6366577 -65787305 + A-rich Low_complexity Low_complexity 1 46 0 194 61 0 30 chr20 6367199 6367232 -65786650 + (TA)n Simple_repeat Simple_repeat 1 32 0 1939 112 18 28 chr20 6367591 6367896 -65785986 + AluSx SINE Alu 1 302 0 244 155 17 17 chr20 6368049 6368107 -65785775 + CT-rich Low_complexity Low_complexity 2 59 0 24 32 0 0 chr20 6369021 6369052 -65784830 + AT_rich Low_complexity Low_complexity 1 31 0 189 0 0 0 chr20 6369395 6369416 -65784466 + (A)n Simple_repeat Simple_repeat 1 21 0 222 37 0 0 chr20 6369881 6369908 -65783974 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 2207 125 0 0 chr20 6370595 6370891 -65782991 + AluSx SINE Alu 1 296 -16 1758 171 4 0 chr20 6370911 6371174 -65782708 + AluJo SINE Alu 6 269 -43 469 218 45 26 chr20 6371335 6371491 -65782391 - MER104 DNA Tc2 -13 167 9 906 177 6 29 chr20 6371833 6372008 -65781874 - FRAM SINE Alu -9 167 1 2067 137 0 13 chr20 6372047 6372354 -65781528 - AluSx SINE Alu -9 303 1 1398 153 4 37 chr20 6372484 6372726 -65781156 + AluJb SINE Alu 63 296 -16 1740 157 14 10 chr20 6373429 6373722 -65780160 + AluJb SINE Alu 9 302 -10 275 217 61 6 chr20 6374017 6374097 -65779785 - MIR3 SINE MIR -35 173 88 324 102 0 0 chr20 6374995 6375044 -65778838 + (CA)n Simple_repeat Simple_repeat 2 50 0 21 36 0 0 chr20 6375066 6375094 -65778788 + AT_rich Low_complexity Low_complexity 1 28 0 2128 133 0 3 chr20 6375107 6375409 -65778473 + AluSg SINE Alu 1 301 -9 22 0 0 0 chr20 6375549 6375571 -65778311 + AT_rich Low_complexity Low_complexity 1 22 0 792 126 31 0 chr20 6375891 6376018 -65777864 + AluJ SINE Alu 1 131 -171 1509 88 0 0 chr20 6376022 6376214 -65777668 - AluSg SINE Alu -1 309 118 592 67 0 0 chr20 6376214 6376289 -65777593 - AluSg SINE Alu -234 75 1 1152 176 0 0 chr20 6376304 6376486 -65777396 + AluJ SINE Alu 131 312 0 24 60 0 30 chr20 6377850 6377875 -65776007 + AT_rich Low_complexity Low_complexity 1 25 -40 1877 149 14 0 chr20 6377875 6378164 -65775718 + AluJb SINE Alu 1 293 -19 24 60 0 30 chr20 6378164 6378205 -65775677 + AT_rich Low_complexity Low_complexity 25 65 0 2133 95 28 0 chr20 6378328 6378612 -65775270 - AluSx SINE Alu -16 296 5 355 82 0 0 chr20 6378613 6378662 -65775220 - Alu SINE Alu -251 50 2 2484 65 0 3 chr20 6379412 6379722 -65774160 + AluY SINE Alu 1 309 -2 1955 120 17 30 chr20 6379846 6380146 -65773736 - AluSx SINE Alu -16 296 1 297 0 0 0 chr20 6380783 6380816 -65773066 + (T)n Simple_repeat Simple_repeat 1 33 0 2813 3 0 10 chr20 6380871 6381185 -65772697 + AluY SINE Alu 1 311 0 2213 138 0 0 chr20 6381575 6381880 -65772002 + AluSx SINE Alu 1 305 -7 2169 94 37 3 chr20 6381921 6382220 -65771662 + AluSp SINE Alu 1 309 -4 1796 129 8 15 chr20 6382232 6382495 -65771387 + AluSq SINE Alu 1 261 -52 395 179 15 0 chr20 6382981 6383048 -65770834 - Tigger3(Golem) DNA MER2_type -1 3028 2961 501 220 0 0 chr20 6383062 6383153 -65770729 - Tigger3(Golem) DNA MER2_type -2938 91 1 204 97 0 0 chr20 6384583 6384614 -65769268 + (A)n Simple_repeat Simple_repeat 1 31 0 253 240 10 50 chr20 6386220 6386320 -65767562 - L1ME4a LINE L1 -59 6062 5967 2161 121 3 0 chr20 6386344 6386634 -65767248 - AluSg SINE Alu -19 291 1 2061 138 0 0 chr20 6387191 6387481 -65766401 + AluSx SINE Alu 1 290 -22 2312 113 0 0 chr20 6387513 6387822 -65766060 + AluSx SINE Alu 3 311 -1 2207 97 38 0 chr20 6388298 6388587 -65765295 + AluSp SINE Alu 1 300 -13 22 35 0 0 chr20 6388935 6388964 -65764918 + AT_rich Low_complexity Low_complexity 1 29 0 2172 108 3 10 chr20 6389227 6389522 -65764360 + AluSx SINE Alu 1 293 -19 353 298 43 0 chr20 6390334 6390428 -65763454 - MIR3 SINE MIR -30 178 81 222 289 126 15 chr20 6392488 6392623 -65761259 - L2 LINE L2 0 3313 3164 267 358 22 37 chr20 6392662 6392796 -65761086 - L2 LINE L2 -221 3051 2920 783 175 69 74 chr20 6393115 6393264 -65760618 + MER5A DNA MER1_type 2 151 -38 2236 84 3 14 chr20 6393264 6393560 -65760322 - AluY SINE Alu -18 293 1 783 175 69 74 chr20 6393560 6393599 -65760283 + MER5A DNA MER1_type 151 189 0 1194 151 34 0 chr20 6393719 6393925 -65759957 + Tigger1 DNA MER2_type 1 213 -2205 * 1482 138 20 0 chr20 6393923 6394169 -65759713 + Tigger1 DNA MER2_type 2003 2253 -165 601 62 0 0 chr20 6394185 6394297 -65759585 + L1PA6 LINE L1 6062 6173 0 2247 120 0 0 chr20 6394330 6394639 -65759243 + AluSg SINE Alu 2 310 0 416 288 46 20 chr20 6394850 6395003 -65758879 + MER5B DNA MER1_type 21 177 -1 1230 211 63 25 chr20 6395095 6395379 -65758503 + AluJo SINE Alu 3 297 -15 265 200 38 38 chr20 6396285 6396365 -65757517 - MER5C DNA MER1_type 0 324 245 469 229 8 34 chr20 6396414 6396532 -65757350 - MER5C DNA MER1_type -201 123 9 299 261 92 25 chr20 6396669 6396788 -65757094 - MIR3 SINE MIR -46 162 36 358 153 22 97 chr20 6397071 6397165 -65756717 + AluJo SINE Alu 48 125 -177 987 157 6 18 chr20 6397207 6397373 -65756509 + AluJo SINE Alu 118 281 -31 350 277 107 44 chr20 6397390 6397596 -65756286 + HAL1 LINE L1 2285 2503 -4 379 123 0 0 chr20 6398236 6398293 -65755589 + AluS SINE Alu 1 57 -242 1049 143 0 6 chr20 6398293 6398454 -65755428 + AluSg/x SINE Alu 142 301 -11 2078 126 7 0 chr20 6398535 6398821 -65755061 - AluSx SINE Alu -24 288 1 1686 127 3 121 chr20 6399242 6399374 -65754508 + AluSx SINE Alu 1 72 -230 1863 138 3 49 chr20 6399374 6399520 -65754362 + AluSx SINE Alu 1 127 -185 2229 97 14 0 chr20 6399520 6399809 -65754073 + AluSg SINE Alu 1 293 -17 1863 138 3 49 chr20 6399809 6399966 -65753916 + AluSx SINE Alu 127 290 -22 1686 127 3 121 chr20 6399966 6400163 -65753719 + AluSx SINE Alu 72 291 -11 788 197 56 0 chr20 6400183 6400325 -65753557 + FRAM SINE Alu 1 143 -33 2419 108 0 0 chr20 6400330 6400637 -65753245 - AluSx SINE Alu -5 307 1 331 283 177 79 chr20 6401567 6401664 -65752218 - L2 LINE L2 0 3272 3186 1976 154 0 22 chr20 6401664 6401975 -65751907 + AluSx SINE Alu 1 304 -8 2114 114 3 7 chr20 6401980 6402270 -65751612 + AluSg SINE Alu 1 289 -21 331 283 177 79 chr20 6402270 6402534 -65751348 - L2 LINE L2 -89 3183 2869 2453 92 0 0 chr20 6402712 6403015 -65750867 - AluSx SINE Alu -9 303 1 1370 196 76 11 chr20 6403628 6403743 -65750139 + AluJb SINE Alu 3 109 -203 288 0 0 0 chr20 6403743 6403775 -65750107 + (CA)n Simple_repeat Simple_repeat 2 33 0 1370 196 76 11 chr20 6403775 6403934 -65749948 + AluJb SINE Alu 109 295 -17 1803 84 9 0 chr20 6404468 6404695 -65749187 + AluSp SINE Alu 3 231 -82 832 209 65 10 chr20 6405521 6405722 -65748160 + MER20 DNA MER1_type 1 212 -7 2268 131 0 0 chr20 6405973 6406279 -65747603 + AluSx SINE Alu 1 306 -6 2183 107 45 0 chr20 6406279 6406569 -65747313 + AluSg SINE Alu 1 303 -7 1009 155 37 0 chr20 6406646 6406807 -65747075 + AluSg/x SINE Alu 137 303 -9 227 211 47 47 chr20 6409673 6409801 -65744081 + (CCCGG)n Simple_repeat Simple_repeat 2 129 0 24 53 0 0 chr20 6410004 6410042 -65743840 + GC_rich Low_complexity Low_complexity 1 38 0 2451 54 14 3 chr20 6410269 6410563 -65743319 + AluSx SINE Alu 1 297 -15 229 202 155 24 chr20 6410755 6410839 -65743043 + MER5A DNA MER1_type 11 105 -84 2293 82 0 0 chr20 6411053 6411357 -65742525 + AluSc SINE Alu 2 305 0 1905 145 20 0 chr20 6411485 6411789 -65742093 + AluSx SINE Alu 1 310 -2 191 204 68 23 chr20 6412012 6412056 -65741826 - L2 LINE L2 -2 3311 3266 2380 90 3 28 chr20 6412265 6412586 -65741296 - AluSq SINE Alu 0 313 1 1462 103 70 0 chr20 6412758 6412972 -65740910 + MER30 DNA MER1_type 2 230 0 2089 130 0 7 chr20 6413020 6413319 -65740563 + AluSc SINE Alu 1 297 -12 1717 176 19 32 chr20 6413537 6413850 -65740032 - AluJb SINE Alu -3 309 1 822 216 9 69 chr20 6414124 6414173 -65739709 + AluJb SINE Alu 82 132 -180 252 0 0 0 chr20 6414173 6414201 -65739681 + (TA)n Simple_repeat Simple_repeat 2 29 0 822 216 9 69 chr20 6414201 6414382 -65739500 + AluJb SINE Alu 132 298 -14 1991 155 0 0 chr20 6414463 6414754 -65739128 - AluSx SINE Alu -21 291 1 432 51 0 0 chr20 6414804 6414863 -65739019 + (TATG)n Simple_repeat Simple_repeat 2 60 0 1878 169 3 0 chr20 6414863 6415147 -65738735 - AluSx SINE Alu -27 285 1 305 195 143 39 chr20 6415165 6415211 -65738671 - AluJo SINE Alu -129 173 133 339 25 0 0 chr20 6415211 6415251 -65738631 + (TG)n Simple_repeat Simple_repeat 2 41 0 305 195 143 39 chr20 6415251 6415281 -65738601 - AluJo SINE Alu -169 133 89 1781 141 72 4 chr20 6415293 6415570 -65738312 - AluJb SINE Alu -16 296 1 2479 74 3 0 chr20 6415818 6416117 -65737765 + AluSp SINE Alu 1 300 -13 2255 103 14 0 chr20 6416200 6416492 -65737390 - AluSg SINE Alu -14 296 1 2518 80 3 0 chr20 6417035 6417347 -65736535 + AluSp SINE Alu 1 313 0 1594 199 7 14 chr20 6417602 6417913 -65735969 + AluSx SINE Alu 1 309 0 1705 205 3 3 chr20 6417914 6418217 -65735665 + AluJb SINE Alu 1 303 -9 1127 188 33 0 chr20 6418220 6418433 -65735449 - LTR8A LTR ERV1 -349 378 159 225 211 0 0 chr20 6418458 6418510 -65735372 + AluJ/monomer SINE Alu 250 301 -1 2321 98 3 13 chr20 6418530 6418845 -65735037 - AluSx SINE Alu 0 312 1 2295 117 3 0 chr20 6418845 6419152 -65734730 - AluSx SINE Alu -3 309 1 2122 129 3 0 chr20 6419202 6419489 -65734393 - AluSx SINE Alu -24 288 1 1024 70 0 28 chr20 6419546 6419689 -65734193 - Alu SINE Alu 0 310 172 2421 95 0 3 chr20 6419749 6420053 -65733829 + AluSx SINE Alu 2 304 -8 2260 117 7 0 chr20 6420689 6421012 -65732870 - AluSp SINE Alu 0 325 1 182 206 159 48 chr20 6421014 6421077 -65732805 + L2 LINE L2 3171 3240 -32 2604 44 0 0 chr20 6421224 6421522 -65732360 + AluY SINE Alu 1 298 -13 1854 165 0 31 chr20 6421935 6422257 -65731625 + AluJb SINE Alu 1 312 0 1034 161 0 6 chr20 6422348 6422509 -65731373 - AluJo SINE Alu -135 177 18 2155 144 0 0 chr20 6422609 6422915 -65730967 + AluSx SINE Alu 1 306 -6 848 199 0 119 chr20 6423016 6423252 -65730630 + AluSx SINE Alu 5 212 -100 1406 121 0 0 chr20 6423334 6423516 -65730366 + AluSg/x SINE Alu 97 278 -32 189 0 0 0 chr20 6423516 6423537 -65730345 + (CAAT)n Simple_repeat Simple_repeat 4 24 0 4561 105 38 31 chr20 6423561 6423723 -65730159 - LTR8 LTR ERV1 0 691 532 2164 109 10 23 chr20 6423723 6424027 -65729855 - AluSx SINE Alu -12 300 1 4561 105 38 31 chr20 6424027 6424550 -65729332 - LTR8 LTR ERV1 -159 532 1 2447 88 0 0 chr20 6424630 6424935 -65728947 + AluSq SINE Alu 1 305 -8 1813 180 30 10 chr20 6424943 6425248 -65728634 + AluJb SINE Alu 1 311 -1 2285 201 89 99 chr20 6425548 6426383 -65727499 + LTR1B LTR ERV1 1 826 0 23 0 0 0 chr20 6426982 6427005 -65726877 + AT_rich Low_complexity Low_complexity 1 23 0 1846 157 10 10 chr20 6427046 6427358 -65726524 - AluSx SINE Alu 0 312 1 1707 173 3 32 chr20 6427408 6427553 -65726329 + AluJo SINE Alu 1 149 -163 2055 118 3 14 chr20 6427553 6427842 -65726040 + AluSx SINE Alu 21 306 -6 1707 173 3 32 chr20 6427842 6428009 -65725873 + AluJo SINE Alu 149 304 -8 395 275 42 35 chr20 6428204 6428269 -65725613 - MIR SINE MIR -28 234 171 2351 84 0 0 chr20 6428269 6428603 -65725279 - AluSx SINE Alu 0 334 1 395 275 42 35 chr20 6428603 6428678 -65725204 - MIR SINE MIR -91 171 92 267 343 95 0 chr20 6428686 6428791 -65725091 + MIR SINE MIR 78 192 -70 368 284 106 21 chr20 6428940 6429081 -65724801 - MER63 DNA MER1_type -275 787 9 2044 115 43 0 chr20 6429440 6429719 -65724163 - AluSx SINE Alu -21 291 1 1256 164 0 36 chr20 6429850 6430069 -65723813 + AluJb SINE Alu 1 211 -101 962 132 102 0 chr20 6430069 6430236 -65723646 - LTR8 LTR ERV1 0 691 508 749 179 0 0 chr20 6430237 6430354 -65723528 + AluSq/x SINE Alu 3 119 -193 514 132 26 0 chr20 6430362 6430438 -65723444 + AluY SINE Alu 94 171 -140 1328 206 45 94 chr20 6430477 6430779 -65723103 - MLT1C LTR MaLR -61 406 130 1895 114 0 117 chr20 6430779 6430984 -65722898 - AluSx SINE Alu 0 302 151 2216 96 4 0 chr20 6430984 6431264 -65722618 - AluSp SINE Alu -32 281 1 1895 114 0 117 chr20 6431264 6431400 -65722482 - AluSx SINE Alu -151 151 1 1328 206 45 94 chr20 6431400 6431524 -65722358 - MLT1C LTR MaLR -337 130 1 1308 194 116 8 chr20 6431749 6432017 -65721865 - AluSg SINE Alu 0 310 14 2308 105 0 3 chr20 6432188 6432484 -65721398 + AluSg1 SINE Alu 1 295 -14 1241 171 146 50 chr20 6432526 6432807 -65721075 - AluSg SINE Alu 0 310 3 2238 120 0 0 chr20 6432856 6433157 -65720725 + AluSp SINE Alu 1 301 -12 2609 179 60 21 chr20 6433499 6434034 -65719848 - MER21A LTR ERV1 0 931 376 2422 104 15 29 chr20 6434051 6434486 -65719396 + MER41A LTR ERV1 1 470 -165 989 165 11 11 chr20 6434487 6434663 -65719219 + AluSg/x SINE Alu 137 312 0 2280 94 7 0 chr20 6434679 6434966 -65718916 + AluSp SINE Alu 1 289 -24 791 136 157 0 chr20 6434978 6435125 -65718757 + MER41B LTR ERV1 466 635 0 1010 161 11 0 chr20 6435217 6435391 -65718491 + AluY SINE Alu 136 311 0 1512 176 4 33 chr20 6435448 6435721 -65718161 + AluJb SINE Alu 36 300 -12 2217 100 91 0 chr20 6435735 6436096 -65717786 - MER39B LTR ERV1 0 653 260 303 93 0 0 chr20 6436100 6436143 -65717739 + (T)n Simple_repeat Simple_repeat 1 43 0 2379 100 0 0 chr20 6436184 6436484 -65717398 - AluSc SINE Alu -9 300 1 1523 179 4 0 chr20 6436511 6436740 -65717142 - AluSx SINE Alu -82 230 1 829 148 25 0 chr20 6436752 6436874 -65717008 - FLAM_C SINE Alu -18 125 1 217 376 80 0 chr20 6436919 6437044 -65716838 + L2 LINE L2 1086 1220 -2094 501 207 98 18 chr20 6437086 6437250 -65716632 - MLT1F1 LTR MaLR 0 567 391 300 53 0 0 chr20 6437283 6437321 -65716561 + (TCC)n Simple_repeat Simple_repeat 3 40 0 1611 154 23 53 chr20 6437334 6437633 -65716249 - AluJo SINE Alu -22 290 1 11084 51 9 12 chr20 6437645 6439025 -65714857 - SVA Other Other -9 1377 2 269 259 37 49 chr20 6439147 6439228 -65714654 - MLT1F1 LTR MaLR -304 286 207 2149 129 0 3 chr20 6439378 6439673 -65714209 - AluSx SINE Alu -18 294 1 2186 117 7 0 chr20 6439673 6439971 -65713911 - AluSx SINE Alu -12 300 1 2063 220 89 4 chr20 6440182 6440645 -65713237 - MLT1F LTR MaLR 0 542 41 926 153 0 7 chr20 6440700 6440837 -65713045 + AluJb SINE Alu 1 136 -176 2070 126 34 0 chr20 6440855 6441148 -65712734 + AluSx SINE Alu 1 303 -9 628 260 104 24 chr20 6441817 6442067 -65711815 + L2 LINE L2 1851 2120 -1194 669 210 0 8 chr20 6442077 6442196 -65711686 + AluSq/x SINE Alu 2 119 -193 2123 141 3 0 chr20 6442196 6442501 -65711381 - AluSx SINE Alu -6 306 1 1688 137 133 0 chr20 6442569 6442840 -65711042 - AluSx SINE Alu -5 307 1 888 284 177 28 chr20 6442902 6443459 -65710423 + L2 LINE L2 2144 2860 -453 2263 117 3 0 chr20 6443459 6443766 -65710116 + AluSx SINE Alu 1 308 -4 888 284 177 28 chr20 6443766 6444014 -65709868 + L2 LINE L2 2860 3070 -243 1102 185 17 0 chr20 6444239 6444417 -65709465 + AluJb SINE Alu 109 289 -23 1321 128 0 15 chr20 6445079 6445306 -65708576 - AluSg/x SINE Alu 0 308 85 618 110 12 0 chr20 6445306 6445388 -65708494 - AluSp/q SINE Alu -63 250 168 993 69 0 42 chr20 6445388 6445532 -65708350 + AluSp/q SINE Alu 176 313 0 1683 178 31 0 chr20 6445635 6445922 -65707960 + AluJb SINE Alu 1 296 -16 2121 122 3 0 chr20 6445943 6446237 -65707645 + AluY SINE Alu 1 295 -16 2389 78 3 16 chr20 6446687 6446996 -65706886 + AluSq SINE Alu 1 305 -8 241 293 0 0 chr20 6447243 6447318 -65706564 - MIR3 SINE MIR -9 199 125 1996 162 0 0 chr20 6447322 6447624 -65706258 + AluSx SINE Alu 1 302 -10 2221 122 0 0 chr20 6447635 6447967 -65705915 - AluSg SINE Alu 0 332 1 1470 157 0 8 chr20 6447992 6448228 -65705654 - AluJb SINE Alu -9 303 70 2388 102 0 0 chr20 6448322 6448626 -65705256 - AluSq SINE Alu -9 304 1 2182 85 3 21 chr20 6448662 6448967 -65704915 + AluSg SINE Alu 5 304 0 191 172 35 0 chr20 6448997 6449012 -65704870 + GA-rich Low_complexity Low_complexity 1 14 -46 1688 164 64 20 chr20 6449012 6449310 -65704572 + AluJb SINE Alu 1 311 -1 191 172 35 0 chr20 6449310 6449352 -65704530 + GA-rich Low_complexity Low_complexity 14 60 0 1874 118 70 0 chr20 6449740 6450010 -65703872 - AluSg SINE Alu -13 297 9 2278 102 0 0 chr20 6450023 6450340 -65703542 - AluSx SINE Alu 0 317 1 214 222 0 19 chr20 6450407 6450461 -65703421 - MIR SINE MIR -56 152 100 3764 93 15 99 chr20 6450596 6451281 -65702601 + MER4A LTR ERV1 1 627 -37 2183 138 0 0 chr20 6451281 6451579 -65702303 - AluSx SINE Alu -14 298 1 2243 130 3 0 chr20 6451924 6452232 -65701650 + AluSx SINE Alu 1 309 -3 2218 109 0 7 chr20 6452601 6452894 -65700988 - AluSx SINE Alu -19 293 3 2411 64 3 10 chr20 6453089 6453387 -65700495 - AluY SINE Alu -15 296 1 243 0 0 0 chr20 6453569 6453596 -65700286 + (TG)n Simple_repeat Simple_repeat 2 28 0 285 212 0 159 chr20 6453779 6453930 -65699952 + MIR SINE MIR 136 262 0 2308 102 3 0 chr20 6453969 6454262 -65699620 - AluSc SINE Alu -15 294 1 1524 177 7 21 chr20 6454292 6454574 -65699308 + AluJo SINE Alu 35 312 0 1904 114 25 89 chr20 6454762 6455077 -65698805 + AluJb SINE Alu 1 295 -17 335 241 190 26 chr20 6455082 6455198 -65698684 - MIR SINE MIR -10 252 118 236 235 111 12 chr20 6455200 6455281 -65698601 - MLT1K LTR MaLR -48 540 452 2501 44 7 3 chr20 6455457 6455754 -65698128 - AluY SINE Alu -9 302 5 809 275 95 64 chr20 6455954 6456376 -65697506 - LTR16A LTR ERVL 0 450 16 1883 160 0 0 chr20 6457031 6457163 -65696719 + AluJo SINE Alu 1 132 -180 1798 129 39 25 chr20 6457163 6457443 -65696439 + AluSx SINE Alu 15 298 -14 1883 160 0 0 chr20 6457443 6457597 -65696285 + AluJo SINE Alu 131 287 -25 631 248 0 35 chr20 6457662 6457803 -65696079 + AluJo SINE Alu 2 137 -175 521 148 0 87 chr20 6457799 6457914 -65695968 + FLAM_C SINE Alu 39 143 0 * 262 105 0 0 chr20 6458863 6458901 -65694981 - Alu SINE Alu -42 258 221 263 184 0 0 chr20 6458931 6458980 -65694902 + L1MC5 LINE L1 7843 7891 -70 2392 97 3 0 chr20 6459012 6459322 -65694560 + AluSx SINE Alu 1 311 -1 191 281 51 148 chr20 6459364 6459560 -65694322 - L2 LINE L2 -230 3042 2866 2045 127 20 0 chr20 6459750 6460042 -65693840 + AluSx SINE Alu 1 298 -14 2738 130 30 39 chr20 6460050 6460512 -65693370 + L1PB4 LINE L1 5581 6038 -118 1922 150 0 14 chr20 6460514 6460800 -65693082 + AluJo SINE Alu 1 282 -30 533 71 0 0 chr20 6460800 6460870 -65693012 - Alu SINE Alu -9 300 231 184 182 0 0 chr20 6461606 6461639 -65692243 + MIR SINE MIR 113 145 -63 936 294 87 32 chr20 6461971 6462440 -65691442 + L1ME LINE L1 5319 5813 -349 246 240 0 0 chr20 6462570 6462620 -65691262 + (TATATG)n Simple_repeat Simple_repeat 1 50 0 1480 116 98 0 chr20 6462639 6462854 -65691028 + AluSx SINE Alu 1 236 -76 229 111 0 0 chr20 6462887 6462923 -65690959 - HSMAR1 DNA Mariner -1250 37 2 2946 6 0 0 chr20 6464059 6464371 -65689511 + AluYb8 SINE Alu 1 312 -6 769 132 18 0 chr20 6464379 6464532 -65689350 + FLAM_C SINE Alu 1 155 0 252 83 0 0 chr20 6464539 6464575 -65689307 + MER94 DNA DNA 79 114 -20 2389 90 0 10 chr20 6464877 6465189 -65688693 - AluSg SINE Alu 0 310 2 1701 185 0 29 chr20 6465586 6465899 -65687983 + AluJo SINE Alu 3 306 -6 631 136 25 111 chr20 6465911 6466110 -65687772 - MER33 DNA MER1_type -3 321 140 579 76 0 13 chr20 6466115 6466194 -65687688 + MSTA LTR MaLR 1 78 -348 200 109 43 22 chr20 6466206 6466252 -65687630 + (TTTAA)n Simple_repeat Simple_repeat 4 50 0 1906 133 17 7 chr20 6466316 6466609 -65687273 + MSTA LTR MaLR 133 428 0 589 175 56 32 chr20 6466615 6466741 -65687141 - MER33 DNA MER1_type -195 129 1 361 18 0 54 chr20 6466769 6466825 -65687057 + (TTCC)n Simple_repeat Simple_repeat 2 54 0 2122 114 31 0 chr20 6466841 6467130 -65686752 - AluSx SINE Alu -14 298 1 381 202 24 12 chr20 6467476 6467560 -65686322 - L2 LINE L2 -15 3298 3214 1856 91 0 0 chr20 6467598 6467855 -65686027 + AluSx SINE Alu 55 311 0 1838 145 3 42 chr20 6468223 6468390 -65685492 - AluJb SINE Alu -14 298 147 2196 122 0 0 chr20 6468390 6468685 -65685197 - AluSq SINE Alu -18 295 1 1838 145 3 42 chr20 6468685 6468827 -65685055 - AluJb SINE Alu -165 147 1 318 254 0 0 chr20 6468848 6468911 -65684971 - ERVL LTR ERVL -826 4938 4876 2347 141 33 85 chr20 6469030 6469252 -65684630 - L1MB2 LINE L1 -2 6169 5937 1788 148 3 39 chr20 6469252 6469557 -65684325 - AluJo SINE Alu -18 294 1 2347 141 33 85 chr20 6469557 6469743 -65684139 - L1MB2 LINE L1 -234 5937 5786 1926 156 0 0 chr20 6469743 6470051 -65683831 - AluSx SINE Alu 0 308 1 2347 141 33 85 chr20 6470051 6470124 -65683758 - L1MB2 LINE L1 -385 5786 5711 899 243 99 56 chr20 6470176 6470550 -65683332 + MLT1I LTR MaLR 16 405 -4 326 227 205 22 chr20 6470550 6470735 -65683147 - L2 LINE L2 -264 3049 2831 30 27 0 0 chr20 6471116 6471153 -65682729 + AT_rich Low_complexity Low_complexity 1 37 0 1911 95 76 0 chr20 6471331 6471641 -65682241 - AluSx SINE Alu 0 330 1 1760 140 17 24 chr20 6471906 6472199 -65681683 + AluJb SINE Alu 1 291 -21 2332 91 0 0 chr20 6472199 6472496 -65681386 + AluY SINE Alu 3 299 -12 22 0 0 0 chr20 6472885 6472907 -65680975 + AT_rich Low_complexity Low_complexity 1 22 0 1958 164 0 3 chr20 6472931 6473218 -65680664 + AluSx SINE Alu 1 286 -26 466 221 160 8 chr20 6473675 6473806 -65680076 - MER20 DNA MER1_type -17 202 52 1066 232 59 11 chr20 6474811 6475083 -65678799 - L1MC4 LINE L1 -213 7829 7545 315 0 0 0 chr20 6475256 6475291 -65678591 + (A)n Simple_repeat Simple_repeat 1 35 0 430 297 31 0 chr20 6476005 6476133 -65677749 - MIR3 SINE MIR -41 167 36 972 229 52 68 chr20 6476274 6476584 -65677298 - MLT1B LTR MaLR -85 305 1 228 175 79 16 chr20 6476584 6476647 -65677235 - Charlie4 DNA MER1_type -1708 253 187 2192 98 190 6 chr20 6476647 6476994 -65676888 + LTR57 LTR ERVL 1 411 0 978 143 11 48 chr20 6477001 6477190 -65676692 - Charlie4 DNA MER1_type -1779 182 1 821 252 73 57 chr20 6477898 6478334 -65675548 + LTR16A1 LTR ERVL 13 455 -2 25 0 0 0 chr20 6480482 6480507 -65673375 + AT_rich Low_complexity Low_complexity 1 25 0 766 171 0 0 chr20 6480514 6480631 -65673251 - FLAM_C SINE Alu -25 118 2 489 184 54 41 chr20 6480654 6480801 -65673081 - L1ME3A LINE L1 -1 6169 6021 24 0 0 0 chr20 6481029 6481053 -65672829 + AT_rich Low_complexity Low_complexity 1 24 0 2641 104 6 8 chr20 6481126 6481491 -65672391 - THE1B LTR MaLR 0 364 1 220 250 135 48 chr20 6481527 6481631 -65672251 + L2 LINE L2 2593 2705 -609 230 274 49 10 chr20 6481897 6481999 -65671883 + L1P LINE L1 4954 5059 -1087 346 292 28 96 chr20 6482200 6482535 -65671347 + L1ME LINE L1 5295 5605 -516 2351 94 0 3 chr20 6482535 6482834 -65671048 - AluSx SINE Alu -14 298 1 346 292 28 96 chr20 6482834 6482861 -65671021 + L1ME LINE L1 5605 5632 -489 259 228 49 41 chr20 6482872 6482995 -65670887 + MER113 DNA MER1_type? 8 131 -390 314 294 92 35 chr20 6483171 6483534 -65670348 - L2 LINE L2 -203 3110 2719 336 220 97 40 chr20 6483597 6483793 -65670089 + L1M4 LINE L1 4926 5137 -1009 2057 113 0 55 chr20 6483794 6484104 -65669778 - AluSq SINE Alu -17 296 4 748 161 8 8 chr20 6484141 6484265 -65669617 - AluJb SINE Alu -187 125 2 487 259 140 9 chr20 6484303 6484531 -65669351 + L1MC4 LINE L1 7781 8038 -4 1478 144 10 100 chr20 6484531 6484830 -65669052 - AluJo SINE Alu -22 290 19 600 299 48 10 chr20 6485842 6486049 -65667833 + L1MDa LINE L1 15 229 -6311 246 156 89 0 chr20 6486081 6486171 -65667711 + GA-rich Low_complexity Low_complexity 5 102 0 2067 169 46 3 chr20 6486391 6486741 -65667141 - MLT1A1 LTR MaLR 0 365 1 402 277 134 5 chr20 6488162 6488364 -65665518 + L2 LINE L2 2842 3069 -244 742 261 58 4 chr20 6488403 6488644 -65665238 + HAL1 LINE L1 714 967 -1540 275 225 12 25 chr20 6488737 6488817 -65665065 + HAL1 LINE L1 1824 1902 -605 662 175 12 105 chr20 6488903 6488989 -65664893 - Tigger2 DNA MER2_type 0 2718 2654 2822 67 3 16 chr20 6488989 6489363 -65664519 - L1PA11 LINE L1 -1 6173 5805 662 175 12 105 chr20 6489363 6489447 -65664435 - Tigger2 DNA MER2_type -64 2654 2564 * 1406 120 10 0 chr20 6489446 6489654 -65664228 - Tigger2 DNA MER2_type -2508 210 1 850 249 75 61 chr20 6489658 6490148 -65663734 + HAL1 LINE L1 2011 2507 0 2134 110 0 58 chr20 6490176 6490503 -65663379 + AluSx SINE Alu 1 308 -4 499 156 9 9 chr20 6491129 6491238 -65662644 + (TAGA)n Simple_repeat Simple_repeat 4 112 0 515 170 18 45 chr20 6491851 6491963 -65661919 + MIR SINE MIR 31 139 -123 350 314 50 6 chr20 6492358 6492517 -65661365 + LTR67 LTR ERVL 384 549 -8 269 203 29 14 chr20 6492524 6492593 -65661289 + MIR SINE MIR 157 226 -36 231 36 0 0 chr20 6492692 6492720 -65661162 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 181 306 0 32 chr20 6492778 6492840 -65661042 + MER5B DNA MER1_type 17 76 -102 279 0 0 0 chr20 6492861 6492892 -65660990 + (TG)n Simple_repeat Simple_repeat 1 31 0 596 187 0 41 chr20 6492917 6493040 -65660842 - L1ME3 LINE L1 0 6162 6045 263 222 32 0 chr20 6494125 6494188 -65659694 - HAL1 LINE L1 -923 1584 1520 1609 254 71 117 chr20 6494190 6495472 -65658410 - L1MEd LINE L1 -4878 1241 19 180 0 0 0 chr20 6496462 6496482 -65657400 + (TA)n Simple_repeat Simple_repeat 2 21 0 2327 97 0 10 chr20 6496482 6496782 -65657100 - AluSx SINE Alu -11 301 5 783 244 91 0 chr20 6496922 6497131 -65656751 - MIR SINE MIR -13 249 22 1002 297 46 23 chr20 6497240 6497674 -65656208 + MARNA DNA Mariner 129 572 -14 2248 109 7 0 chr20 6498464 6498767 -65655115 + AluSq SINE Alu 1 305 -8 335 229 60 0 chr20 6498817 6498900 -65654982 + MLT1I LTR MaLR 314 401 -8 2104 103 27 3 chr20 6499131 6499423 -65654459 - AluSx SINE Alu -13 299 1 23 33 0 0 chr20 6499424 6499454 -65654428 + AT_rich Low_complexity Low_complexity 1 30 0 3183 231 57 12 chr20 6499717 6500833 -65653049 - L1MDb LINE L1 -4606 1800 658 240 297 31 0 chr20 6501231 6501295 -65652587 + C-rich Low_complexity Low_complexity 1 66 0 407 148 0 0 chr20 6501550 6501611 -65652271 - AluJ/FLAM SINE Alu -250 62 2 853 220 202 46 chr20 6501623 6502014 -65651868 + MLT1H LTR MaLR 98 549 0 1990 137 7 10 chr20 6502162 6502483 -65651399 - AluSx SINE Alu 0 312 1 639 185 122 44 chr20 6503161 6503424 -65650458 - MLT1J2 LTR MaLR -72 374 60 1847 157 7 13 chr20 6503711 6504016 -65649866 - AluJb SINE Alu -9 303 1 484 237 75 94 chr20 6504135 6504216 -65649666 + MIR SINE MIR 1 82 -180 1887 145 0 20 chr20 6504216 6504513 -65649369 - AluJo SINE Alu -21 291 1 484 237 75 94 chr20 6504513 6504697 -65649185 + MIR SINE MIR 82 261 -1 2267 101 3 0 chr20 6504702 6505000 -65648882 - AluSg SINE Alu -11 299 1 227 350 29 0 chr20 6505113 6505250 -65648632 + MIR SINE MIR 63 203 -59 1586 214 74 40 chr20 6507609 6508057 -65645825 - MLT1C LTR MaLR -2 465 3 232 269 15 30 chr20 6508215 6508282 -65645600 + MIR3 SINE MIR 119 184 -24 390 21 0 0 chr20 6508335 6508382 -65645500 + (CA)n Simple_repeat Simple_repeat 2 48 0 413 205 26 13 chr20 6508392 6508470 -65645412 + FRAM/FAM SINE Alu 6 84 -101 21 71 0 0 chr20 6510245 6510287 -65643595 + AT_rich Low_complexity Low_complexity 1 42 0 1286 194 0 104 chr20 6511390 6511535 -65642347 + AluY SINE Alu 1 93 -218 2243 108 0 0 chr20 6511535 6511830 -65642052 + AluSx SINE Alu 1 295 -17 1286 194 0 104 chr20 6511830 6512019 -65641863 + AluY SINE Alu 93 300 -11 26 0 0 0 chr20 6512384 6512410 -65641472 + AT_rich Low_complexity Low_complexity 1 26 0 221 320 100 20 chr20 6513555 6513655 -65640227 - MIR3 SINE MIR -99 109 2 1340 190 132 4 chr20 6513694 6513952 -65639930 + AluJb SINE Alu 1 291 -21 2206 83 0 21 chr20 6514204 6514569 -65639313 + AluSq SINE Alu 1 359 0 194 0 39 0 chr20 6514693 6514719 -65639163 + (CAAA)n Simple_repeat Simple_repeat 1 27 0 777 182 0 0 chr20 6515142 6515274 -65638608 + FLAM_C SINE Alu 2 133 0 1922 141 17 3 chr20 6516908 6517198 -65636684 - AluJb SINE Alu -17 295 2 27 29 0 0 chr20 6517467 6517501 -65636381 + AT_rich Low_complexity Low_complexity 1 34 0 2190 102 20 0 chr20 6517987 6518281 -65635601 + AluSp SINE Alu 7 306 -7 188 218 148 50 chr20 6518362 6518463 -65635419 + MIR SINE MIR 28 138 -124 710 220 0 0 chr20 6518867 6518999 -65634883 + MER58B DNA MER1_type 161 292 -49 244 138 31 0 chr20 6519179 6519244 -65634638 + A-rich Low_complexity Low_complexity 4 70 0 243 220 180 20 chr20 6519555 6519655 -65634227 + HAL1 LINE L1 22 137 -2370 1147 179 31 69 chr20 6519820 6519925 -65633957 + MER58B DNA MER1_type 61 168 -2252 1955 134 0 24 chr20 6519925 6520256 -65633626 + AluSx SINE Alu 1 324 0 2369 84 0 3 chr20 6520258 6520557 -65633325 + AluSx SINE Alu 4 301 -11 1147 179 31 69 chr20 6520557 6520737 -65633145 + MER58B DNA MER1_type 169 339 -2 528 282 97 31 chr20 6520935 6521126 -65632756 + HAL1 LINE L1 771 948 -1559 13416 124 51 30 chr20 6521126 6521297 -65632585 - Tigger1 DNA MER2_type 0 2418 2252 294 50 0 0 chr20 6521297 6521337 -65632545 + (CA)n Simple_repeat Simple_repeat 2 41 0 13416 124 51 30 chr20 6521337 6523384 -65630498 - Tigger1 DNA MER2_type -166 2252 143 1929 163 0 10 chr20 6523384 6523685 -65630197 + AluJb SINE Alu 1 298 -14 13416 124 51 30 chr20 6523685 6523828 -65630054 - Tigger1 DNA MER2_type -2275 143 5 528 282 97 31 chr20 6523828 6524058 -65629824 + HAL1 LINE L1 948 1220 -1287 739 282 85 36 chr20 6524229 6525002 -65628880 + L1MEd LINE L1 565 1403 -4726 1947 159 3 0 chr20 6525002 6525304 -65628578 + AluJb SINE Alu 1 303 -9 739 282 85 36 chr20 6525304 6525602 -65628280 + L1MEd LINE L1 1403 1685 -4444 24 77 0 0 chr20 6525990 6526042 -65627840 + AT_rich Low_complexity Low_complexity 1 52 0 599 271 111 52 chr20 6526072 6526273 -65627609 + L1MEd LINE L1 2263 2451 -3678 2228 111 0 9 chr20 6526273 6526588 -65627294 + AluSx SINE Alu 1 312 0 599 271 111 52 chr20 6526588 6526708 -65627174 + L1MEd LINE L1 2451 2562 -3567 2432 46 0 33 chr20 6526708 6527012 -65626870 + AluY SINE Alu 1 294 -17 599 271 111 52 chr20 6527012 6527437 -65626445 + L1MEd LINE L1 2562 3054 -3075 391 156 231 0 chr20 6527452 6527638 -65626244 + Charlie5 DNA MER1_type 2391 2619 0 1722 103 0 74 chr20 6527658 6527929 -65625953 + AluSx SINE Alu 1 251 -61 421 237 87 8 chr20 6527946 6528199 -65625683 + L1MEd LINE L1 3056 3328 -2801 344 135 0 0 chr20 6528199 6528251 -65625631 + MER66A LTR ERV1 287 338 -140 1153 219 99 128 chr20 6528416 6528888 -65624994 + L1MEd LINE L1 3433 3917 -2212 545 165 220 0 chr20 6528888 6528997 -65624885 + FLAM_C SINE Alu 1 133 -10 1153 219 99 128 chr20 6528997 6529402 -65624480 + L1MEd LINE L1 3917 4332 -1797 2070 142 7 3 chr20 6529402 6529704 -65624178 - AluSx SINE Alu -9 303 1 1153 219 99 128 chr20 6529704 6530138 -65623744 + L1MEd LINE L1 4332 4812 -1317 288 329 13 0 chr20 6530276 6530428 -65623454 + HAL1 LINE L1 1433 1586 -921 1273 179 22 0 chr20 6530437 6530660 -65623222 + AluJb SINE Alu 85 312 0 440 289 95 19 chr20 6530686 6530897 -65622985 + HAL1 LINE L1 1602 1828 -679 622 155 0 0 chr20 6531060 6531157 -65622725 + AluJ/FLAM SINE Alu 1 97 -215 189 0 0 0 chr20 6531164 6531185 -65622697 + (CA)n Simple_repeat Simple_repeat 1 21 0 21 0 0 0 chr20 6532292 6532313 -65621569 + AT_rich Low_complexity Low_complexity 1 21 0 26 50 0 0 chr20 6532818 6532858 -65621024 + AT_rich Low_complexity Low_complexity 1 40 0 751 213 86 25 chr20 6533343 6533540 -65620342 + MIR SINE MIR 52 260 -2 1396 277 177 57 chr20 6533667 6534292 -65619590 + L2 LINE L2 960 1509 -1805 734 160 48 0 chr20 6534292 6534417 -65619465 + FLAM_A SINE Alu 2 132 -1 1396 277 177 57 chr20 6534417 6535307 -65618575 + L2 LINE L2 1509 2656 -658 219 318 24 47 chr20 6535307 6535392 -65618490 + L2 LINE L2 2608 2690 -624 2126 117 13 0 chr20 6535755 6536063 -65617819 + AluSx SINE Alu 1 312 0 1636 143 0 8 chr20 6536601 6536839 -65617043 - AluJo SINE Alu -10 302 67 752 129 0 95 chr20 6538073 6538220 -65615662 + FLAM_C SINE Alu 1 133 0 2496 82 0 0 chr20 6538291 6538597 -65615285 - AluSg SINE Alu -4 306 1 317 235 193 84 chr20 6541000 6541359 -65612523 + L1M2 LINE L1 553 1349 -5500 23 33 0 0 chr20 6542095 6542125 -65611757 + AT_rich Low_complexity Low_complexity 1 30 0 450 231 48 0 chr20 6542172 6542276 -65611606 - MIR SINE MIR -62 200 92 28 29 0 0 chr20 6542648 6542683 -65611199 + AT_rich Low_complexity Low_complexity 1 35 0 28 29 0 0 chr20 6543833 6543868 -65610014 + AT_rich Low_complexity Low_complexity 1 35 0 1978 131 0 11 chr20 6544254 6544569 -65609313 - AluSx SINE Alu 0 314 3 640 156 0 0 chr20 6544906 6545002 -65608880 + AluJ/FLAM SINE Alu 1 96 -216 1011 160 0 32 chr20 6545065 6545252 -65608630 + AluJb SINE Alu 110 290 -22 2015 143 13 10 chr20 6545593 6545907 -65607975 - 7SLRNA srpRNA srpRNA -5 315 1 2060 157 15 0 chr20 6546239 6546571 -65607311 + MER1B DNA MER1_type 1 337 0 1563 173 6 58 chr20 6546949 6547261 -65606621 - AluJo SINE Alu -16 296 1 2287 107 10 0 chr20 6547348 6547646 -65606236 + AluSx SINE Alu 1 301 -11 989 206 56 36 chr20 6547681 6547987 -65605895 - MLT1D LTR MaLR -191 314 3 313 96 11 85 chr20 6548189 6548366 -65605516 + (TA)n Simple_repeat Simple_repeat 1 164 0 210 167 0 62 chr20 6548406 6548502 -65605380 + (TA)n Simple_repeat Simple_repeat 1 90 0 244 253 26 49 chr20 6549245 6549359 -65604523 - LTR67 LTR ERVL -357 200 38 1328 150 146 16 chr20 6549761 6550014 -65603868 + AluJo SINE Alu 1 286 -26 694 211 0 8 chr20 6550026 6550154 -65603728 + FLAM_A SINE Alu 1 127 -6 2204 100 19 7 chr20 6550159 6550468 -65603414 + AluSp SINE Alu 1 313 0 362 274 62 0 chr20 6550583 6550696 -65603186 - MER74A LTR ERVL -84 474 355 25 0 0 0 chr20 6550930 6550955 -65602927 + AT_rich Low_complexity Low_complexity 1 25 0 1094 141 0 0 chr20 6551120 6551276 -65602606 - AluSg/x SINE Alu -26 284 129 1717 183 24 7 chr20 6551346 6551641 -65602241 - AluJo SINE Alu -12 300 1 253 302 185 0 chr20 6551674 6551896 -65601986 - HAL1b LINE L1 -572 776 514 284 333 100 39 chr20 6551896 6552386 -65601496 + LTR67 LTR ERVL 23 542 -15 465 145 35 76 chr20 6552420 6552565 -65601317 + MER58 DNA MER1_type 86 224 -2196 1496 185 10 49 chr20 6552712 6553020 -65600862 - AluJo SINE Alu -14 298 3 438 65 0 0 chr20 6553116 6553178 -65600704 + (TG)n Simple_repeat Simple_repeat 1 62 0 220 319 106 38 chr20 6553623 6553783 -65600099 - MIR SINE MIR -27 235 65 283 329 13 0 chr20 6554857 6554933 -65598949 - L2 LINE L2 -36 3236 3160 586 266 23 23 chr20 6555196 6555289 -65598593 - MIR SINE MIR -54 208 113 479 111 0 25 chr20 6555289 6555370 -65598512 + MADE1 DNA Mariner 1 79 -1 586 266 23 23 chr20 6555370 6555453 -65598429 - MIR SINE MIR -148 114 32 425 261 0 0 chr20 6555838 6555926 -65597956 - L2 LINE L2 -17 3255 3168 2222 111 0 13 chr20 6557264 6557571 -65596311 + AluSx SINE Alu 2 304 -8 2085 119 10 0 chr20 6558224 6558519 -65595363 + AluSx SINE Alu 1 298 -14 183 279 313 25 chr20 6558533 6558734 -65595148 - MIR SINE MIR -1 261 3 315 189 74 82 chr20 6558949 6559071 -65594811 + L1MC4a LINE L1 5839 5959 -1849 2302 102 0 3 chr20 6559166 6559461 -65594421 - AluSx SINE Alu -18 294 1 752 252 102 29 chr20 6559670 6559983 -65593899 + L1MC4a LINE L1 5574 5909 -1899 1827 148 10 10 chr20 6560513 6560816 -65593066 + AluJb SINE Alu 1 303 -9 2078 129 0 3 chr20 6561794 6562089 -65591793 + AluSx SINE Alu 1 294 -18 2386 78 7 3 chr20 6562181 6562476 -65591406 - AluSc SINE Alu -13 296 1 230 322 25 8 chr20 6563556 6563677 -65590205 - L1ME4a LINE L1 -164 5957 5835 299 309 43 12 chr20 6563696 6563858 -65590024 - L1ME4a LINE L1 -352 5769 5603 2227 116 3 0 chr20 6563920 6564221 -65589661 - AluSx SINE Alu -10 302 1 238 223 117 21 chr20 6565582 6565676 -65588206 - HAL1b LINE L1 -1169 179 77 410 283 9 9 chr20 6566603 6566716 -65587166 - MER58 DNA MER1_type -2306 114 2 1877 148 0 0 chr20 6566747 6567025 -65586857 - AluSx SINE Alu -9 303 26 3011 246 103 36 chr20 6567229 6568505 -65585377 - L2 LINE L2 0 3313 1953 1993 121 24 24 chr20 6568776 6569073 -65584809 + AluSx SINE Alu 1 297 -15 280 215 183 11 chr20 6569189 6569282 -65584600 - L2 LINE L2 -7 3306 3198 431 248 115 73 chr20 6569809 6570043 -65583839 - MIR SINE MIR 0 262 19 501 284 204 10 chr20 6570216 6570417 -65583465 + MIR SINE MIR 6 245 -17 255 219 141 0 chr20 6570419 6570483 -65583399 + MER91B DNA MER1_type 2 74 -116 1641 184 13 20 chr20 6570662 6570786 -65583096 - AluJo SINE Alu -4 308 185 2261 189 111 34 chr20 6570786 6571310 -65582572 + LTR6A LTR ERV1 1 564 0 1641 184 13 20 chr20 6571310 6571490 -65582392 - AluJo SINE Alu -127 185 6 587 134 214 36 chr20 6571493 6571605 -65582277 - FLAM_C SINE Alu -10 133 2 2545 65 0 0 chr20 6571844 6572153 -65581729 + AluY SINE Alu 1 309 -2 1849 176 0 0 chr20 6572360 6572661 -65581221 - AluJo SINE Alu -9 303 3 428 313 50 19 chr20 6572928 6573088 -65580794 - MER5B DNA MER1_type -1 177 13 1699 181 21 3 chr20 6573212 6573500 -65580382 + AluJb SINE Alu 1 293 -19 2069 136 0 0 chr20 6573689 6573976 -65579906 + AluSx SINE Alu 5 291 -21 1219 148 0 0 chr20 6574910 6575092 -65578790 + AluSg/x SINE Alu 126 307 -5 1728 153 3 23 chr20 6575146 6575446 -65578436 + AluJb SINE Alu 14 307 -5 1959 169 87 28 chr20 6576145 6576535 -65577347 - MER4B LTR ERV1 -197 413 1 1539 186 0 36 chr20 6576535 6576842 -65577040 + AluJo SINE Alu 14 309 -3 398 273 91 6 chr20 6576967 6577132 -65576750 + LTR16C LTR ERVL 17 195 -296 335 193 159 11 chr20 6577264 6577352 -65576530 + LTR16C LTR ERVL 391 491 0 839 214 66 11 chr20 6577376 6577558 -65576324 - MER58A DNA MER1_type -3 221 30 2260 113 0 0 chr20 6578029 6578330 -65575552 - AluSx SINE Alu -11 301 1 548 258 71 11 chr20 6578498 6578680 -65575202 - MIR SINE MIR -58 204 12 309 244 58 12 chr20 6578860 6578905 -65574977 + MLT1L LTR MaLR 515 556 -59 1417 183 71 77 chr20 6578905 6579081 -65574801 - MER58B DNA MER1_type -2080 340 165 2382 73 3 0 chr20 6579081 6579367 -65574515 - AluSq SINE Alu -16 297 11 1417 183 71 77 chr20 6579367 6579528 -65574354 - MER58B DNA MER1_type -2255 165 5 309 244 58 12 chr20 6579528 6579568 -65574314 + MLT1L LTR MaLR 556 604 -11 467 277 161 43 chr20 6581110 6581673 -65572209 + HAL1 LINE L1 992 1719 -788 225 296 14 0 chr20 6581679 6581750 -65572132 + HAL1 LINE L1 1813 1884 -623 814 126 0 0 chr20 6582991 6583102 -65570780 - HY1 scRNA scRNA -1 111 1 189 310 149 23 chr20 6583136 6583223 -65570659 + MIR SINE MIR 48 145 -117 2303 80 3 29 chr20 6583804 6584117 -65569765 + AluY SINE Alu 1 305 -6 855 223 178 98 chr20 6584876 6584966 -65568916 + MLT1F1 LTR MaLR 1 82 -513 2973 6 0 0 chr20 6584966 6585284 -65568598 + AluYb8 SINE Alu 1 318 0 855 223 178 98 chr20 6585284 6585744 -65568138 + MLT1F1 LTR MaLR 82 595 0 601 151 0 11 chr20 6585908 6586001 -65567881 + AluJb SINE Alu 209 300 -12 880 155 0 8 chr20 6586416 6586545 -65567337 - FLAM_A SINE Alu -5 128 1 874 265 76 64 chr20 6586582 6586698 -65567184 + L1ME3 LINE L1 4987 5100 -1062 2173 104 3 0 chr20 6586698 6586986 -65566896 - AluSp SINE Alu -24 289 1 874 265 76 64 chr20 6586986 6587196 -65566686 + L1ME3 LINE L1 5100 5306 -856 1053 185 0 0 chr20 6587196 6587353 -65566529 + FRAM SINE Alu 2 158 -8 874 265 76 64 chr20 6587353 6587669 -65566213 + L1ME3 LINE L1 5306 5657 -505 2262 79 0 0 chr20 6587669 6587949 -65565933 + AluSg SINE Alu 27 306 -4 874 265 76 64 chr20 6587949 6588131 -65565751 + L1ME3 LINE L1 5657 5835 -327 2284 83 7 0 chr20 6589260 6589549 -65564333 - AluSc SINE Alu -18 291 1 1292 139 93 9 chr20 6589897 6590113 -65563769 - MER46A DNA MER2_type 0 236 3 1592 148 112 11 chr20 6590947 6591224 -65562658 + AluSg1 SINE Alu 2 306 -3 2033 117 33 10 chr20 6591573 6591873 -65562009 + AluSc SINE Alu 1 307 -2 772 255 52 14 chr20 6592673 6592885 -65560997 - MIR SINE MIR -29 233 14 2482 64 0 0 chr20 6593867 6594163 -65559719 + AluY SINE Alu 1 296 -15 297 0 0 0 chr20 6594168 6594201 -65559681 + (CA)n Simple_repeat Simple_repeat 1 33 0 330 309 171 6 chr20 6594348 6594523 -65559359 + LTR50 LTR ERVL 16 219 -576 514 245 121 29 chr20 6594625 6594939 -65558943 + LTR33A LTR ERVL 307 507 -16 235 164 0 49 chr20 6596094 6596155 -65557727 + L1MC2 LINE L1 6276 6333 -11 194 312 104 16 chr20 6596331 6596456 -65557426 - MIR3 SINE MIR -69 139 4 2046 96 17 43 chr20 6598268 6598569 -65555313 - AluSx SINE Alu -19 293 1 796 143 0 9 chr20 6598956 6599068 -65554814 - AluJb SINE Alu -187 125 15 182 36 0 36 chr20 6599489 6599517 -65554365 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 700 200 0 0 chr20 6599519 6599634 -65554248 - AluSg/x SINE Alu -29 280 166 1279 164 24 0 chr20 6599659 6599866 -65554016 - AluJb SINE Alu -100 212 1 273 209 152 29 chr20 6600074 6600179 -65553703 - LTR33 LTR ERVL -38 483 366 487 293 117 46 chr20 6600385 6600624 -65553258 + MIR SINE MIR 1 256 -6 241 333 32 24 chr20 6601374 6601500 -65552382 + MIR3 SINE MIR 15 141 -67 444 328 66 8 chr20 6601560 6601804 -65552078 + MIR SINE MIR 5 262 0 26 0 0 0 chr20 6601846 6601872 -65552010 + AT_rich Low_complexity Low_complexity 1 26 0 1029 271 192 17 chr20 6601979 6602689 -65551193 - L2 LINE L2 -14 3299 2453 27 73 0 0 chr20 6603527 6603582 -65550300 + AT_rich Low_complexity Low_complexity 1 55 0 1601 146 3 128 chr20 6606680 6607023 -65546859 + AluY SINE Alu 2 301 0 997 243 113 60 chr20 6607326 6607758 -65546124 - LTR16B LTR ERVL 0 464 10 2413 84 3 6 chr20 6608128 6608439 -65545443 - AluSg SINE Alu 0 310 1 791 232 13 13 chr20 6608538 6608693 -65545189 + FRAM SINE Alu 1 155 -11 410 152 0 13 chr20 6608693 6608772 -65545110 + GA-rich Low_complexity Low_complexity 3 80 0 225 250 0 0 chr20 6609838 6609914 -65543968 + (CATATA)n Simple_repeat Simple_repeat 6 81 0 2052 110 13 0 chr20 6610405 6610706 -65543176 + AluSq SINE Alu 1 305 -8 583 207 32 48 chr20 6611135 6611323 -65542559 - MER5A DNA MER1_type -2 187 3 186 71 0 0 chr20 6612171 6612199 -65541683 + (T)n Simple_repeat Simple_repeat 1 28 0 183 80 0 0 chr20 6612509 6612534 -65541348 + (TTAAA)n Simple_repeat Simple_repeat 2 26 0 2034 117 3 7 chr20 6612543 6612843 -65541039 + AluSx SINE Alu 1 299 -13 1276 163 80 64 chr20 6612907 6613220 -65540662 + MER58B DNA MER1_type 24 341 0 900 236 51 4 chr20 6613355 6613592 -65540290 + L2 LINE L2 1932 2179 -1135 2022 180 42 102 chr20 6613592 6613917 -65539965 - LTR55 LTR ERV -5 543 267 1865 142 0 0 chr20 6613917 6614199 -65539683 - AluJb SINE Alu -5 307 26 2022 180 42 102 chr20 6614199 6614450 -65539432 - LTR55 LTR ERV -281 267 2 2272 243 121 9 chr20 6614451 6615238 -65538644 + L2 LINE L2 2178 3047 -266 2052 115 7 3 chr20 6615336 6615641 -65538241 - AluSq SINE Alu -7 306 1 324 253 53 111 chr20 6615757 6615878 -65538004 + HAL1 LINE L1 2324 2432 -75 1497 215 111 14 chr20 6615878 6616302 -65537580 - MLT1C LTR MaLR 0 467 3 324 253 53 111 chr20 6616302 6616370 -65537512 + HAL1 LINE L1 2432 2502 -5 210 37 0 0 chr20 6616670 6616697 -65537185 + (TG)n Simple_repeat Simple_repeat 1 27 0 1173 263 24 58 chr20 6616973 6617234 -65536648 - LTR16C LTR ERVL -2 489 246 1965 204 12 46 chr20 6617234 6617715 -65536167 + MLT1C LTR MaLR 1 465 -2 1173 263 24 58 chr20 6617715 6617868 -65536014 - LTR16C LTR ERVL -245 246 89 987 170 131 5 chr20 6618105 6618311 -65535571 + MER34C LTR ERV1 1 232 -353 507 196 65 82 chr20 6620531 6620832 -65533050 + LTR48 LTR ERV1 378 781 -6 496 263 99 11 chr20 6620998 6621180 -65532702 - MIR SINE MIR -6 256 54 1913 148 0 3 chr20 6621188 6621485 -65532397 - AluJb SINE Alu -15 297 2 288 0 0 0 chr20 6621485 6621517 -65532365 + (TC)n Simple_repeat Simple_repeat 2 33 0 * 474 18 0 0 chr20 6621516 6621571 -65532311 + (TA)n Simple_repeat Simple_repeat 2 56 0 1478 120 171 12 chr20 6621578 6621836 -65532046 - AluSg SINE Alu 0 300 2 707 191 191 0 chr20 6622791 6622948 -65530934 + MER5A DNA MER1_type 1 187 -2 589 221 104 12 chr20 6623168 6623331 -65530551 + MER5B DNA MER1_type 1 178 0 184 250 28 56 chr20 6623493 6623565 -65530317 + L2 LINE L2 2679 2748 -566 264 269 75 54 chr20 6625587 6625680 -65528202 - MIR3 SINE MIR 0 208 114 1061 116 52 174 chr20 6626304 6626649 -65527233 + MER33 DNA MER1_type 22 324 0 1422 188 104 20 chr20 6626939 6627284 -65526598 + MLT1A2 LTR MaLR 1 374 0 180 349 48 24 chr20 6627653 6627736 -65526146 + L3 LINE CR1 1493 1577 0 722 293 75 14 chr20 6627932 6628212 -65525670 + MER102a DNA MER1_type 2 298 -32 2251 100 0 0 chr20 6628798 6629109 -65524773 - AluY SINE Alu 0 311 1 1396 115 8 47 chr20 6629223 6629457 -65524425 - AluSg/x SINE Alu -4 306 82 2030 102 3 48 chr20 6629468 6629783 -65524099 - AluSq SINE Alu -8 305 5 508 298 60 18 chr20 6630411 6630579 -65523303 - MIR3 SINE MIR -1 207 33 476 214 145 0 chr20 6631491 6631622 -65522260 + L1ME3A LINE L1 6019 6168 -2 1990 102 32 3 chr20 6631627 6631911 -65521971 + AluSg SINE Alu 1 292 -18 29 60 0 0 chr20 6632267 6632317 -65521565 + AT_rich Low_complexity Low_complexity 1 50 0 2239 109 0 6 chr20 6633708 6634021 -65519861 + AluSx SINE Alu 1 311 -1 1066 141 61 5 chr20 6634250 6634448 -65519434 + L1MB7 LINE L1 5976 6184 0 24 32 0 0 chr20 6634471 6634502 -65519380 + AT_rich Low_complexity Low_complexity 1 31 0 228 67 0 0 chr20 6634980 6635010 -65518872 + (CA)n Simple_repeat Simple_repeat 2 31 0 314 149 218 11 chr20 6637500 6637551 -65516331 + L1MC4a LINE L1 7598 7637 -171 645 14 0 0 chr20 6637551 6637625 -65516257 + (TATTG)n Simple_repeat Simple_repeat 2 75 0 314 149 218 11 chr20 6637625 6637660 -65516222 + L1MC4a LINE L1 7637 7702 -106 876 136 0 0 chr20 6637661 6637793 -65516089 + AluJb SINE Alu 2 133 -179 375 169 0 0 chr20 6637793 6637864 -65516018 + GA-rich Low_complexity Low_complexity 2 72 0 1133 204 11 8 chr20 6637864 6638124 -65515758 + L1MC4 LINE L1 7782 8042 0 2145 93 3 0 chr20 6638648 6638939 -65514943 - AluY SINE Alu -19 292 1 673 256 24 104 chr20 6638940 6639179 -65514703 - L1M4 LINE L1 -1196 4950 4762 1819 176 0 3 chr20 6639179 6639492 -65514390 - AluJb SINE Alu 0 312 1 673 256 24 104 chr20 6639492 6639702 -65514180 - L1M4 LINE L1 -1384 4762 4537 180 0 0 0 chr20 6639718 6639738 -65514144 + (T)n Simple_repeat Simple_repeat 1 20 0 397 186 14 0 chr20 6639743 6639813 -65514069 - AluJ/FLAM SINE Alu -231 71 1 892 209 107 111 chr20 6640049 6640517 -65513365 - LTR33A LTR ERVL -51 472 7 1512 170 30 7 chr20 6640852 6641123 -65512759 + AluJo SINE Alu 13 289 -23 346 214 22 22 chr20 6641144 6641233 -65512649 - MLT1H LTR MaLR -460 89 1 200 292 0 0 chr20 6641609 6641657 -65512225 + (TATG)n Simple_repeat Simple_repeat 4 51 0 282 242 194 0 chr20 6642107 6642229 -65511653 + Charlie4 DNA MER1_type 177 1774 -187 471 48 0 0 chr20 6642230 6642292 -65511590 + (CA)n Simple_repeat Simple_repeat 2 63 0 1957 124 0 20 chr20 6642317 6642615 -65511267 + AluSc SINE Alu 1 292 -17 250 261 0 15 chr20 6642619 6642684 -65511198 + Charlie4 DNA MER1_type 1898 1961 0 1206 256 80 6 chr20 6642894 6643257 -65510625 + L2 LINE L2 1890 2279 -1035 921 230 80 13 chr20 6643262 6643501 -65510381 + MIR SINE MIR 8 262 0 297 354 164 3 chr20 6643518 6643823 -65510059 - L2 LINE L2 -983 2331 1978 186 344 42 91 chr20 6643917 6644202 -65509680 + L2 LINE L2 2919 3189 -83 389 311 24 6 chr20 6644204 6644307 -65509575 + (CAT)n Simple_repeat Simple_repeat 1 110 -57 2179 107 3 10 chr20 6644307 6644615 -65509267 - AluSq SINE Alu -7 306 1 389 311 24 6 chr20 6644615 6644675 -65509207 + (CAT)n Simple_repeat Simple_repeat 110 167 0 315 131 0 71 chr20 6644679 6644778 -65509104 + (CACCAT)n Simple_repeat Simple_repeat 6 97 0 317 248 43 60 chr20 6644800 6644917 -65508965 - MIR SINE MIR -27 235 121 417 293 47 26 chr20 6645934 6646125 -65507757 - MIR3 SINE MIR 0 208 14 526 243 155 0 chr20 6646612 6646760 -65507122 + MIR SINE MIR 3 173 -89 33 43 0 0 chr20 6649451 6649498 -65504384 + AT_rich Low_complexity Low_complexity 1 47 0 2457 109 11 22 chr20 6649509 6649868 -65504014 + THE1A LTR MaLR 1 355 0 311 133 19 133 chr20 6649917 6650022 -65503860 + L1ME4a LINE L1 5975 6067 -54 683 178 85 0 chr20 6650628 6650757 -65503125 + FLAM_C SINE Alu 1 140 -3 277 198 270 9 chr20 6651379 6651490 -65502392 - MIR SINE MIR -17 245 106 2070 118 0 16 chr20 6651546 6651850 -65502032 - AluSx SINE Alu -13 299 1 805 275 42 72 chr20 6652358 6652693 -65501189 - LTR16C LTR ERVL -5 486 162 224 302 177 10 chr20 6652886 6652982 -65500900 + L2 LINE L2 3199 3310 -3 436 270 48 48 chr20 6653344 6653470 -65500412 - MIR3 SINE MIR -1 207 82 226 360 46 26 chr20 6654412 6654565 -65499317 + MIR3 SINE MIR 3 158 -50 185 278 45 90 chr20 6654568 6654701 -65499181 - L2 LINE L2 -9 3263 3137 299 374 37 0 chr20 6654745 6654852 -65499030 + L2 LINE L2 3151 3261 -11 2089 107 7 3 chr20 6654852 6655151 -65498731 + AluSq SINE Alu 1 300 -13 1868 178 93 137 chr20 6655429 6655614 -65498268 + L1ME3 LINE L1 5343 5534 -628 376 212 7 11 chr20 6655614 6655706 -65498176 - FLAM SINE Alu -10 123 60 1868 178 93 137 chr20 6655706 6656105 -65497777 + L1ME3 LINE L1 5534 5987 -175 199 266 133 8 chr20 6656170 6656298 -65497584 - L2 LINE L2 -302 2970 2827 889 225 117 57 chr20 6656355 6656741 -65497141 + MLT1I LTR MaLR 1 409 0 391 258 189 30 chr20 6656777 6656909 -65496973 - L2 LINE L2 0 3313 3161 37 0 0 0 chr20 6656921 6656958 -65496924 + AT_rich Low_complexity Low_complexity 1 37 0 210 232 207 66 chr20 6656968 6657166 -65496716 - L2 LINE L2 -159 3154 2929 521 266 106 29 chr20 6657167 6657374 -65496508 - L2 LINE L2 -605 2709 2487 773 178 66 116 chr20 6657374 6657540 -65496342 + MLT1D LTR MaLR 1 153 -352 2320 79 3 9 chr20 6657540 6657855 -65496027 - AluSp SINE Alu 0 313 1 773 178 66 116 chr20 6657855 6657930 -65495952 + MLT1D LTR MaLR 153 230 -275 1348 153 96 0 chr20 6657933 6658162 -65495720 + AluJb SINE Alu 1 251 -61 809 281 191 12 chr20 6658174 6658662 -65495220 - L2 LINE L2 -1007 2307 1733 2190 251 18 30 chr20 6658690 6658753 -65495129 - MLT1H1 LTR MaLR 0 555 493 3603 152 25 17 chr20 6658753 6658957 -65494925 - MER6A DNA MER2_type -260 605 404 2128 109 0 3 chr20 6658957 6659259 -65494623 + AluSg SINE Alu 1 301 -9 3603 152 25 17 chr20 6659259 6659654 -65494228 - MER6A DNA MER2_type -461 404 1 2190 251 18 30 chr20 6659654 6660090 -65493792 - MLT1H1 LTR MaLR -62 493 61 2095 100 7 3 chr20 6660090 6660391 -65493491 - AluSx SINE Alu -10 302 1 2190 251 18 30 chr20 6660391 6660452 -65493430 - MLT1H1 LTR MaLR -494 61 1 241 298 262 19 chr20 6660459 6660768 -65493114 - L2 LINE L2 -1635 1679 1296 183 256 128 64 chr20 6660903 6661028 -65492854 - MIR SINE MIR -8 254 122 444 266 100 57 chr20 6661239 6661322 -65492560 + MARNA DNA Mariner 129 207 -379 225 0 0 0 chr20 6661322 6661347 -65492535 + (CA)n Simple_repeat Simple_repeat 1 25 0 444 266 100 57 chr20 6661347 6661564 -65492318 + MARNA DNA Mariner 207 442 -144 302 221 53 32 chr20 6661805 6661900 -65491982 - MLT1L LTR MaLR -2 613 517 * 589 235 126 75 chr20 6661898 6662226 -65491656 - MLT1L LTR MaLR -238 288 1 1855 166 3 3 chr20 6662300 6662601 -65491281 + AluJb SINE Alu 1 301 -11 329 248 64 0 chr20 6663304 6663413 -65490469 + MIR SINE MIR 12 127 -135 636 187 216 18 chr20 6663416 6663587 -65490295 - MER63A DNA MER1_type -5 205 1 1993 107 0 0 chr20 6664048 6664300 -65489582 - AluSp SINE Alu -61 252 1 350 195 3 111 chr20 6664478 6664605 -65489277 - MLT1F1 LTR MaLR 0 567 434 1821 203 47 18 chr20 6665053 6665334 -65488548 - MLT1C LTR MaLR 0 467 167 2058 125 3 7 chr20 6665334 6665629 -65488253 - AluSq SINE Alu -19 294 1 1821 203 47 18 chr20 6665629 6665796 -65488086 - MLT1C LTR MaLR -300 167 6 442 177 0 0 chr20 6666019 6666098 -65487784 + MER96 DNA MER1_type? 97 175 0 220 118 333 0 chr20 6666099 6666150 -65487732 - MER5A DNA MER1_type -113 76 9 254 96 0 19 chr20 6666624 6666676 -65487206 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 358 221 0 0 chr20 6666708 6666776 -65487106 - FRAM SINE Alu -24 142 75 911 128 16 0 chr20 6667270 6667395 -65486487 - FLAM_C SINE Alu -16 127 1 210 23 45 45 chr20 6667462 6667506 -65486376 + (TTTG)n Simple_repeat Simple_repeat 1 44 0 2224 80 7 0 chr20 6667513 6667789 -65486093 - AluSp SINE Alu -35 278 1 1836 145 38 7 chr20 6668117 6668407 -65485475 - AluJo SINE Alu -13 299 1 2393 77 3 16 chr20 6668575 6668886 -65484996 + AluSp SINE Alu 7 313 0 184 217 167 0 chr20 6669124 6669184 -65484698 + MIR SINE MIR 71 140 -68 198 0 0 0 chr20 6669337 6669359 -65484523 + (TG)n Simple_repeat Simple_repeat 2 23 0 2273 108 7 3 chr20 6672486 6672793 -65481089 - AluSx SINE Alu -4 308 1 860 196 17 6 chr20 6672911 6673084 -65480798 - MER5B DNA MER1_type -3 175 1 1216 138 60 112 chr20 6673305 6673573 -65480309 - AluJo SINE Alu -29 283 30 637 276 199 8 chr20 6674648 6675114 -65478768 - L2 LINE L2 -4 3309 2749 773 206 0 0 chr20 6675132 6675258 -65478624 - FLAM_C SINE Alu -14 129 4 2790 241 65 33 chr20 6675260 6675818 -65478064 - L2 LINE L2 -567 2747 2143 1369 197 88 7 chr20 6675818 6676102 -65477780 + AluJo SINE Alu 1 307 -5 2790 241 65 33 chr20 6676102 6676531 -65477351 - L2 LINE L2 -1171 2143 1729 2038 138 6 13 chr20 6677461 6677773 -65476109 - AluSx SINE Alu -2 310 1 720 144 0 0 chr20 6678360 6678471 -65475411 + FLAM_C SINE Alu 1 111 -32 201 39 0 0 chr20 6678507 6678533 -65475349 + (A)n Simple_repeat Simple_repeat 1 26 0 2009 158 3 0 chr20 6679509 6679806 -65474076 - AluSx SINE Alu -14 298 1 1934 134 17 3 chr20 6680382 6680672 -65473210 + AluSx SINE Alu 1 294 -18 2321 88 0 10 chr20 6680674 6680969 -65472913 + AluSc SINE Alu 3 294 -15 2236 112 146 8 chr20 6681366 6681742 -65472140 + MSTA LTR MaLR 1 428 0 568 272 68 19 chr20 6681746 6681952 -65471930 + MLT1H LTR MaLR 36 251 -298 2185 114 0 10 chr20 6682119 6682416 -65471466 - AluSx SINE Alu -10 302 9 2298 94 17 0 chr20 6683440 6683737 -65470145 - AluSx SINE Alu -10 302 1 266 315 43 27 chr20 6684099 6684283 -65469599 + MIR SINE MIR 44 230 -32 2325 89 0 0 chr20 6684895 6685186 -65468696 - AluSc SINE Alu -18 291 1 1039 189 82 0 chr20 6685313 6685509 -65468373 + AluJo SINE Alu 28 239 -73 28 0 0 0 chr20 6685537 6685565 -65468317 + AT_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr20 6685597 6685627 -65468255 + AT_rich Low_complexity Low_complexity 1 30 0 2189 125 3 0 chr20 6685696 6686001 -65467881 + AluSx SINE Alu 2 307 -5 2164 125 0 7 chr20 6686038 6686343 -65467539 - AluSx SINE Alu -7 305 3 1284 101 0 28 chr20 6686751 6686930 -65466952 - AluSg/x SINE Alu -13 297 124 2053 144 7 0 chr20 6687076 6687368 -65466514 + AluJb SINE Alu 1 294 -18 470 321 46 25 chr20 6687394 6687631 -65466251 - L1MEd LINE L1 -5635 484 243 28 48 0 0 chr20 6687857 6687899 -65465983 + AT_rich Low_complexity Low_complexity 1 42 0 195 302 52 42 chr20 6687913 6688009 -65465873 - MIR3 SINE MIR -28 180 84 201 305 0 0 chr20 6688040 6688099 -65465783 + CT-rich Low_complexity Low_complexity 1 59 0 2270 126 3 0 chr20 6688488 6688798 -65465084 + AluSx SINE Alu 1 311 -1 665 254 57 10 chr20 6689420 6689613 -65464269 - MIR SINE MIR -12 250 49 621 179 0 9 chr20 6689863 6689975 -65463907 - MER3 DNA MER1_type 0 209 99 264 233 105 38 chr20 6690040 6690173 -65463709 + L1ME3A LINE L1 6029 6170 0 1621 163 4 0 chr20 6691057 6691302 -65462580 + AluJb SINE Alu 1 246 -66 1976 148 7 10 chr20 6692617 6692927 -65460955 - AluJb SINE Alu -3 309 1 524 263 60 50 chr20 6693088 6693369 -65460513 + L1MB4 LINE L1 4562 4845 -1301 45 0 0 0 chr20 6693369 6693414 -65460468 + AT_rich Low_complexity Low_complexity 1 45 0 3313 172 51 22 chr20 6693563 6693934 -65459948 + L1MB4 LINE L1 5428 5826 -354 2206 107 7 7 chr20 6693934 6694233 -65459649 + AluSq SINE Alu 1 299 -14 3313 172 51 22 chr20 6694233 6694489 -65459393 + L1MB4 LINE L1 5826 6073 -107 1354 181 61 34 chr20 6694538 6694817 -65459065 + AluJo SINE Alu 12 301 -11 693 114 70 0 chr20 6694817 6694931 -65458951 + L1MB4 LINE L1 6059 6180 0 1354 181 61 34 chr20 6694931 6694944 -65458938 + AluJo SINE Alu 301 312 0 2431 176 28 24 chr20 6694948 6695442 -65458440 + L1MB7 LINE L1 5681 6176 -8 28 71 0 0 chr20 6695658 6695714 -65458168 + AT_rich Low_complexity Low_complexity 1 56 0 479 279 60 50 chr20 6695716 6696014 -65457868 + L1ME LINE L1 5258 5558 -604 2160 118 0 10 chr20 6696463 6696769 -65457113 - AluSx SINE Alu -9 303 1 328 82 0 0 chr20 6696793 6696842 -65457040 - L1MB3 LINE L1 -4 6179 6131 870 127 0 0 chr20 6696852 6696978 -65456904 - FRAM SINE Alu -23 153 28 2433 97 0 0 chr20 6697212 6697520 -65456362 + AluSx SINE Alu 5 312 0 1009 254 140 29 chr20 6697998 6698411 -65455471 - L1MC4a LINE L1 -1888 5920 5462 309 277 0 27 chr20 6698421 6698533 -65455349 - L1MC4a LINE L1 -2444 5364 5256 2192 128 0 0 chr20 6698686 6698984 -65454898 - AluSq SINE Alu -15 298 1 913 254 110 18 chr20 6700126 6700527 -65453355 + Charlie4a DNA MER1_type 3 440 -68 208 300 0 0 chr20 6700544 6700594 -65453288 + L2 LINE L2 3246 3295 -18 207 0 0 0 chr20 6700863 6700886 -65452996 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 2342 117 0 0 chr20 6701729 6702038 -65451844 + AluSg SINE Alu 1 309 -1 1281 133 27 106 chr20 6702570 6702667 -65451215 + MER46A DNA MER2_type 1 104 -2627 1980 138 0 0 chr20 6702667 6702979 -65450903 - AluSx SINE Alu 0 312 1 1281 133 27 106 chr20 6702979 6703136 -65450746 + MER46A DNA MER2_type 104 236 0 2144 117 13 13 chr20 6703341 6703640 -65450242 + AluSx SINE Alu 1 299 -13 500 185 229 13 chr20 6703745 6703902 -65449980 + MER3 DNA MER1_type 6 196 -13 2351 98 0 7 chr20 6704431 6704737 -65449145 + AluSp SINE Alu 1 304 -9 731 183 0 0 chr20 6705458 6705573 -65448309 + FLAM_A SINE Alu 1 115 -18 207 0 0 0 chr20 6705576 6705599 -65448283 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1170 142 0 0 chr20 6705749 6705918 -65447964 - AluSg/x SINE Alu -11 299 131 2271 131 0 0 chr20 6706163 6706475 -65447407 + AluSx SINE Alu 1 312 0 1812 166 3 41 chr20 6706670 6706989 -65446893 - AluJb SINE Alu -5 307 1 21 0 0 0 chr20 6707441 6707462 -65446420 + AT_rich Low_complexity Low_complexity 1 21 0 258 217 78 54 chr20 6707681 6707810 -65446072 - L1MC5 LINE L1 -46 7915 7784 2395 92 57 20 chr20 6707823 6708172 -65445710 + THE1B LTR MaLR 1 362 -2 787 231 166 21 chr20 6708330 6708717 -65445165 + LTR16C LTR ERVL 19 486 -5 194 326 163 0 chr20 6709472 6709564 -65444318 - L2 LINE L2 0 3272 3166 624 211 58 63 chr20 6709648 6709871 -65444011 + L2 LINE L2 3092 3313 0 952 92 7 21 chr20 6711046 6711188 -65442694 + L1PA7 LINE L1 6008 6147 -7 222 177 16 16 chr20 6711195 6711257 -65442625 + A-rich Low_complexity Low_complexity 2 63 0 2090 135 3 3 chr20 6711260 6711556 -65442326 + AluSq SINE Alu 1 296 -17 2206 80 0 15 chr20 6712091 6712249 -65441633 - AluSx SINE Alu -21 291 137 2235 87 0 0 chr20 6712249 6712524 -65441358 - AluSg SINE Alu -14 296 22 2206 80 0 15 chr20 6712524 6712639 -65441243 - AluSx SINE Alu -175 137 22 1166 67 0 0 chr20 6712640 6712775 -65441107 - AluSq/x SINE Alu -177 135 1 1706 219 145 46 chr20 6712775 6713364 -65440518 + L1ME3A LINE L1 5514 6160 -10 445 240 62 76 chr20 6713373 6713598 -65440284 + MER113 DNA MER1_type? 135 356 -165 2089 123 0 0 chr20 6713760 6714061 -65439821 - AluSx SINE Alu -11 301 1 245 261 0 15 chr20 6714774 6714839 -65439043 - L1ME2 LINE L1 -9 6155 6092 247 162 162 14 chr20 6715592 6715666 -65438216 - MER5A DNA MER1_type -77 112 28 2396 92 3 0 chr20 6715929 6716233 -65437649 - AluSg SINE Alu -5 305 1 486 252 59 15 chr20 6716467 6716602 -65437280 - MIR3 SINE MIR -63 145 5 272 286 10 61 chr20 6718532 6718630 -65435252 - L2 LINE L2 -1 3271 3179 189 200 0 0 chr20 6718636 6718671 -65435211 + MIR SINE MIR 121 155 -107 345 24 0 0 chr20 6719064 6719106 -65434776 + (CA)n Simple_repeat Simple_repeat 1 42 0 1833 102 91 11 chr20 6719110 6719375 -65434507 - AluSc SINE Alu -23 286 1 402 194 14 0 chr20 6719597 6719669 -65434213 - L1ME3A LINE L1 -26 6144 6072 821 209 8 20 chr20 6719750 6719969 -65433913 - L1ME3A LINE L1 -172 6012 5835 1240 163 206 0 chr20 6719976 6720228 -65433654 - AluJo SINE Alu -8 304 1 696 208 15 8 chr20 6720946 6721076 -65432806 + AluJ SINE Alu 3 133 -179 757 40 101 0 chr20 6721088 6721187 -65432695 + L1PA11 LINE L1 6064 6172 -2 1255 134 0 21 chr20 6721192 6721378 -65432504 + AluJ SINE Alu 122 303 -9 259 257 30 40 chr20 6722251 6722352 -65431530 - L1MC4a LINE L1 -1875 5933 5834 520 281 68 51 chr20 6722356 6722591 -65431291 + LTR67 LTR ERVL 23 261 -296 31 0 0 0 chr20 6723507 6723538 -65430344 + AT_rich Low_complexity Low_complexity 1 31 0 350 250 29 10 chr20 6723754 6723858 -65430024 + MLT1H LTR MaLR 50 155 -394 1174 210 36 0 chr20 6723955 6724207 -65429675 + L1MC4a LINE L1 6737 6997 -811 272 244 93 23 chr20 6724248 6724334 -65429548 - MIR SINE MIR -148 114 23 768 254 98 10 chr20 6724384 6724577 -65429305 + MER82 DNA MER2_type 444 653 0 263 219 29 48 chr20 6724579 6724684 -65429198 + HAL1 LINE L1 2333 2435 -72 195 100 0 0 chr20 6725093 6725123 -65428759 + (TGGGGG)n Simple_repeat Simple_repeat 4 33 0 751 252 79 4 chr20 6725192 6725401 -65428481 - MIR SINE MIR -19 243 22 193 338 13 0 chr20 6725572 6725649 -65428233 + L2 LINE L2 2935 3012 -260 261 0 0 0 chr20 6725938 6725967 -65427915 + (T)n Simple_repeat Simple_repeat 1 29 0 600 271 21 2 chr20 6726123 6726307 -65427575 - L1MC4a LINE L1 -436 5685 5515 1364 190 41 14 chr20 6726776 6727066 -65426816 + MLT1C LTR MaLR 1 298 -169 1464 198 100 18 chr20 6727081 6727291 -65426591 - MLT1A1 LTR MaLR 0 365 117 2297 94 3 0 chr20 6727291 6727588 -65426294 - AluSx SINE Alu -14 298 1 1464 198 100 18 chr20 6727588 6727706 -65426176 - MLT1A1 LTR MaLR -248 117 10 402 232 120 16 chr20 6727720 6727845 -65426037 + MLT1C LTR MaLR 318 455 -12 1147 273 54 31 chr20 6728423 6728749 -65425133 + LTR16C LTR ERVL 77 415 -76 2485 117 24 24 chr20 6728749 6729124 -65424758 + THE1C LTR MaLR 1 375 0 1147 273 54 31 chr20 6729124 6729185 -65424697 + LTR16C LTR ERVL 415 473 -18 3365 165 59 50 chr20 6729387 6730061 -65423821 + MER54B LTR ERVL 1 680 -113 539 283 165 31 chr20 6730273 6730595 -65423287 - LTR16A1 LTR ERVL 0 457 93 2507 117 150 91 chr20 6730769 6731040 -65422842 - L1MA5A LINE L1 -5 6292 6038 543 101 13 0 chr20 6731040 6731119 -65422763 + MADE1 DNA Mariner 1 80 0 2507 117 150 91 chr20 6731119 6731421 -65422461 - L1MA5A LINE L1 -259 6038 5685 241 259 0 0 chr20 6731599 6731653 -65422229 - L2 LINE L2 -3 3269 3216 279 377 7 7 chr20 6731795 6731941 -65421941 + (TCCA)n Simple_repeat Simple_repeat 1 146 0 399 237 19 90 chr20 6731991 6732147 -65421735 - L2 LINE L2 0 3313 3169 269 312 110 9 chr20 6732329 6732438 -65421444 + L2 LINE L2 3147 3266 -6 1605 118 24 115 chr20 6732523 6732861 -65421021 + AluYb8 SINE Alu 1 307 -11 1844 169 0 7 chr20 6733247 6733554 -65420328 + AluJb SINE Alu 1 305 -7 255 278 58 58 chr20 6734027 6734232 -65419650 - L1ME4a LINE L1 -83 6038 5834 3522 73 11 5 chr20 6734297 6734738 -65419144 - L1PA8 LINE L1 -1 6171 5728 587 260 18 96 chr20 6735091 6735258 -65418624 - MIR SINE MIR -25 237 89 1550 104 0 0 chr20 6735258 6735469 -65418413 + L1MA2 LINE L1 6094 6304 0 587 260 18 96 chr20 6735469 6735520 -65418362 - MIR SINE MIR -173 89 36 757 179 164 24 chr20 6735799 6736006 -65417876 - MLT1K LTR MaLR -23 565 330 258 289 127 42 chr20 6736071 6736213 -65417669 - MLT1K LTR MaLR -419 169 16 406 182 265 15 chr20 6736237 6736369 -65417513 + MER5A DNA MER1_type 18 182 -7 554 261 111 56 chr20 6736526 6736760 -65417122 + MER115 DNA AcHobo 1 247 -446 1847 151 14 0 chr20 6737728 6738019 -65415863 - AluJb SINE Alu -11 301 7 1350 182 62 140 chr20 6738093 6738257 -65415625 + Charlie4a DNA MER1_type 46 221 -1740 6748 85 30 0 chr20 6738257 6738633 -65415249 - L1PA13 LINE L1 -11 6152 5789 2510 50 0 7 chr20 6738633 6738933 -65414949 - AluY SINE Alu -11 300 3 6748 85 30 0 chr20 6738933 6740006 -65413876 - L1PA13 LINE L1 -374 5789 4697 1350 182 62 140 chr20 6740006 6740300 -65413582 + Charlie4a DNA MER1_type 221 464 -1497 2108 186 80 57 chr20 6740300 6740790 -65413092 + MLT1D LTR MaLR 5 505 0 1350 182 62 140 chr20 6740790 6740830 -65413052 + Charlie4a DNA MER1_type 464 506 -2 1646 229 20 0 chr20 6740904 6741245 -65412637 - MLT1F1 LTR MaLR -8 559 212 411 133 0 0 chr20 6741240 6741300 -65412582 - MLT1F1 LTR MaLR -507 60 1 * 1101 166 0 83 chr20 6741553 6741766 -65412116 - L1MC3 LINE L1 0 7785 7593 1968 134 53 0 chr20 6741766 6742050 -65411832 - AluSx SINE Alu -13 299 1 1101 166 0 83 chr20 6742050 6742077 -65411805 - L1MC3 LINE L1 -192 7593 7565 424 250 62 131 chr20 6742173 6742417 -65411465 + MIR SINE MIR 5 231 -31 4691 169 56 8 chr20 6742724 6743583 -65410299 + MER54A LTR ERVL 2 901 0 2128 137 0 13 chr20 6744294 6744609 -65409273 - AluSq SINE Alu -2 311 1 2097 206 45 13 chr20 6745404 6745632 -65408250 - MER65C LTR ERV1 0 461 242 2881 143 2 25 chr20 6745632 6746074 -65407808 - MSTB1 LTR MaLR 0 432 1 2097 206 45 13 chr20 6746074 6746292 -65407590 - MER65C LTR ERV1 -219 242 1 14589 233 26 17 chr20 6746328 6747729 -65406153 - L1PA16 LINE L1 0 7604 6217 1935 154 57 46 chr20 6747729 6748100 -65405782 - THE1C LTR MaLR 0 375 1 14589 233 26 17 chr20 6748100 6750480 -65403402 - L1PA16 LINE L1 -1387 6217 3806 2260 112 0 7 chr20 6750480 6750785 -65403097 - AluSq SINE Alu -10 303 1 14589 233 26 17 chr20 6750785 6752403 -65401479 - L1PA16 LINE L1 -3798 3806 2204 465 293 28 22 chr20 6752670 6752851 -65401031 - L1PA16 LINE L1 -5276 2298 2117 1357 310 40 28 chr20 6752878 6753455 -65400427 - L1PA16 LINE L1 -6203 1371 788 1726 126 20 0 chr20 6754215 6754470 -65399412 + Tigger5 DNA MER2_type 2063 2322 -1 246 128 0 0 chr20 6754473 6754512 -65399370 + (TG)n Simple_repeat Simple_repeat 2 40 0 2204 206 37 57 chr20 6754518 6754725 -65399157 - L1MCb LINE L1 -4851 1194 984 1859 164 0 3 chr20 6754725 6755017 -65398865 + AluSx SINE Alu 1 291 -21 2204 206 37 57 chr20 6755017 6755784 -65398098 - L1MCb LINE L1 -5061 984 571 955 275 42 70 chr20 6755841 6756267 -65397615 - L1MCb LINE L1 -5444 601 188 1924 133 59 6 chr20 6756267 6756590 -65397292 + L1MA5 LINE L1 5956 6295 -5 10337 216 44 12 chr20 6756632 6758430 -65395452 + L1M4c LINE L1 2053 3975 -2407 186 43 0 0 chr20 6758430 6758453 -65395429 + (CAA)n Simple_repeat Simple_repeat 2 24 0 10337 216 44 12 chr20 6758453 6759431 -65394451 + L1M4c LINE L1 3975 4920 -1462 1163 164 21 0 chr20 6759435 6759624 -65394258 + MSTB LTR MaLR 5 197 -229 185 299 51 56 chr20 6762872 6763069 -65390813 + L3b LINE CR1 1145 1340 -243 1315 136 45 45 chr20 6763559 6763802 -65390080 + MSTB LTR MaLR 184 426 0 5681 174 17 15 chr20 6763802 6764174 -65389708 + L1MA9 LINE L1 4916 5286 -1262 2382 88 0 23 chr20 6764174 6764480 -65389402 + AluSq SINE Alu 1 299 -14 5681 174 17 15 chr20 6764480 6765731 -65388151 + L1MA9 LINE L1 5286 6541 -7 501 244 5 67 chr20 6765906 6766099 -65387783 + HAL1 LINE L1 1979 2159 -348 2335 204 34 28 chr20 6766118 6766617 -65387265 - MLT1F1 LTR MaLR -65 502 1 261 308 10 0 chr20 6766627 6766731 -65387151 + L1ME LINE L1 4232 4336 -1810 1063 272 98 34 chr20 6766822 6767739 -65386143 + L1ME LINE L1 4616 5585 -577 291 381 42 0 chr20 6767851 6768019 -65385863 - L2 LINE L2 -923 2391 2217 1988 123 3 36 chr20 6768274 6768582 -65385300 + AluSx SINE Alu 1 298 -14 21 0 0 0 chr20 6769011 6769032 -65384850 + AT_rich Low_complexity Low_complexity 1 21 0 27191 28 3 0 chr20 6769383 6773207 -65380675 - L1PA2 LINE L1 0 6155 2323 295 287 115 8 chr20 6773462 6773584 -65380298 + MER46C DNA MER2_type 142 276 -62 232 254 45 0 chr20 6773767 6773834 -65380048 - L2 LINE L2 -222 3050 2981 539 256 186 6 chr20 6773986 6774142 -65379740 - MER5A DNA MER1_type 0 189 6 235 233 41 14 chr20 6774142 6774154 -65379728 + MER3 DNA MER1_type 36 49 -160 308 177 25 38 chr20 6774154 6774233 -65379649 - MER3 DNA MER1_type 0 209 132 775 117 0 42 chr20 6774240 6774360 -65379522 + AluSg/x SINE Alu 189 303 -7 592 215 0 0 chr20 6774396 6774503 -65379379 - MER3 DNA MER1_type -93 116 10 1830 189 147 76 chr20 6774634 6775163 -65378719 + MLT1F1 LTR MaLR 1 567 0 684 242 81 10 chr20 6775163 6775361 -65378521 - MIR SINE MIR -43 219 8 354 176 59 209 chr20 6775453 6775521 -65378361 + MER5B DNA MER1_type 17 94 -84 1533 38 0 5 chr20 6775521 6775706 -65378176 + AluY SINE Alu 123 306 -5 354 176 59 209 chr20 6775706 6775824 -65378058 + MER5B DNA MER1_type 94 175 -3 206 281 31 16 chr20 6775873 6775937 -65377945 + MER5A DNA MER1_type 124 188 -1 907 199 11 0 chr20 6776807 6776988 -65376894 - MER5A DNA MER1_type -6 183 1 814 273 27 12 chr20 6777007 6777263 -65376619 + MIR SINE MIR 1 260 -2 3235 159 27 68 chr20 6777425 6778276 -65375606 + LTR1 LTR ERV1 9 785 0 1097 315 54 10 chr20 6779306 6779712 -65374170 + LTR16C LTR ERVL 68 491 0 668 300 76 38 chr20 6780185 6780528 -65373354 - MLT1I LTR MaLR -1 408 53 180 0 0 0 chr20 6780732 6780752 -65373130 + (A)n Simple_repeat Simple_repeat 1 20 0 266 281 123 9 chr20 6781263 6781377 -65372505 - MLT1L LTR MaLR -24 591 465 933 276 87 14 chr20 6781406 6781761 -65372121 - MLT1L LTR MaLR -221 394 14 967 270 98 55 chr20 6781814 6782251 -65371631 - LTR16A1 LTR ERVL -1 456 1 486 0 0 0 chr20 6783228 6783282 -65370600 + (TA)n Simple_repeat Simple_repeat 1 54 0 378 0 0 0 chr20 6783281 6783323 -65370559 + (GA)n Simple_repeat Simple_repeat 2 43 0 * 262 300 12 0 chr20 6783404 6783484 -65370398 + L2 LINE L2 3192 3272 0 3713 72 5 5 chr20 6784878 6785322 -65368560 + MLT2A1 LTR ERVL 1 444 0 610 221 22 7 chr20 6785544 6785680 -65368202 - MER5B DNA MER1_type -16 162 25 198 238 48 16 chr20 6785625 6785688 -65368194 + MER5A DNA MER1_type 109 173 -16 * 203 286 193 8 chr20 6785991 6786110 -65367772 + MER5B DNA MER1_type 3 143 -35 276 247 68 0 chr20 6786970 6787043 -65366839 + HAL1 LINE L1 54 131 -2376 1527 253 150 82 chr20 6787047 6788084 -65365798 + HAL1 LINE L1 432 1539 -968 336 282 0 21 chr20 6788113 6788209 -65365673 + MLT1F1 LTR MaLR 1 94 -466 1002 199 129 48 chr20 6788213 6788305 -65365577 + MLT1A2 LTR MaLR 1 84 -290 1986 153 0 3 chr20 6788305 6788612 -65365270 + AluSx SINE Alu 1 306 -6 1002 199 129 48 chr20 6788612 6788851 -65365031 + MLT1A2 LTR MaLR 84 359 -15 1436 191 83 81 chr20 6788868 6789335 -65364547 + MLT1F1 LTR MaLR 95 562 -5 1209 240 117 80 chr20 6789335 6789808 -65364074 + HAL1 LINE L1 1607 2061 -446 2875 150 26 24 chr20 6789808 6790274 -65363608 - MLT1C LTR MaLR 0 467 1 1209 240 117 80 chr20 6790274 6790505 -65363377 + HAL1 LINE L1 2061 2340 -167 1637 121 4 0 chr20 6790505 6790736 -65363146 + AluSg/x SINE Alu 79 310 0 1209 240 117 80 chr20 6790736 6790751 -65363131 + HAL1 LINE L1 2340 2353 -154 327 141 14 84 chr20 6790751 6790796 -65363086 + LTR67 LTR ERVL 492 532 -25 1621 230 100 66 chr20 6790796 6791327 -65362555 + MLT1H LTR MaLR 1 549 0 327 141 14 84 chr20 6791327 6791352 -65362530 + LTR67 LTR ERVL 532 557 0 2922 3 0 0 chr20 6791842 6792153 -65361729 - AluYa5 SINE Alu 0 311 1 927 172 21 47 chr20 6792680 6792872 -65361010 + LTR41 LTR ERVL 1 187 -586 901 222 48 77 chr20 6793019 6793330 -65360552 + LTR41 LTR ERVL 465 766 -7 963 168 0 19 chr20 6793397 6793558 -65360324 - FRAM SINE Alu -24 152 1 1320 181 112 67 chr20 6793565 6793941 -65359941 + L1ME3A LINE L1 5621 6013 -157 1503 191 109 56 chr20 6793995 6794452 -65359430 + MER66A LTR ERV1 97 478 0 537 215 25 0 chr20 6794477 6794598 -65359284 + L1ME3A LINE L1 6027 6150 -20 31 0 0 0 chr20 6794598 6794629 -65359253 + AT_rich Low_complexity Low_complexity 1 31 0 1269 270 99 13 chr20 6794741 6795134 -65358748 - LTR16B LTR ERVL -4 460 34 1836 82 9 0 chr20 6795189 6795421 -65358461 + L1PA8 LINE L1 5939 6172 0 308 301 88 16 chr20 6795434 6795627 -65358255 + L1MB8 LINE L1 5693 5899 -279 1931 85 0 12 chr20 6795708 6795956 -65357926 + AluY SINE Alu 48 292 -19 1884 142 14 3 chr20 6796159 6796454 -65357428 - AluSx SINE Alu -1 311 14 472 304 88 21 chr20 6796823 6797017 -65356865 + MIR SINE MIR 11 217 -45 250 303 178 46 chr20 6798790 6798942 -65354940 + MIR SINE MIR 18 189 -73 360 0 0 0 chr20 6800199 6800239 -65353643 + (TG)n Simple_repeat Simple_repeat 2 41 0 821 60 30 15 chr20 6800242 6800375 -65353507 + (GAAA)n Simple_repeat Simple_repeat 4 138 0 1285 265 46 88 chr20 6800811 6801438 -65352444 + L1MCb LINE L1 1 601 -5444 2204 206 37 57 chr20 6801495 6802262 -65351620 + L1MCb LINE L1 571 1324 -5061 1859 164 0 3 chr20 6802262 6802554 -65351328 - AluSx SINE Alu -21 291 1 2204 206 37 57 chr20 6802554 6802761 -65351121 + L1MCb LINE L1 1324 1534 -4851 261 83 0 0 chr20 6802767 6802803 -65351079 + (CA)n Simple_repeat Simple_repeat 2 37 0 1726 126 20 0 chr20 6802811 6803066 -65350816 - Tigger5 DNA MER2_type -1 2322 2063 1388 309 40 28 chr20 6803826 6804403 -65349479 + L1PA13 LINE L1 788 1371 -6203 465 293 28 22 chr20 6804430 6804611 -65349271 + L1PA13 LINE L1 2117 2298 -5276 4990 227 44 25 chr20 6804878 6806495 -65347387 + L1PA13 LINE L1 2204 3799 -3785 2223 115 0 7 chr20 6806495 6806799 -65347083 + AluSq SINE Alu 1 302 -11 4990 227 44 25 chr20 6806799 6806934 -65346948 + L1PA13 LINE L1 3799 3930 -3654 867 221 178 98 chr20 6807345 6807435 -65346447 + MLT1F1 LTR MaLR 1 82 -513 2973 6 0 0 chr20 6807435 6807753 -65346129 + AluYb8 SINE Alu 1 318 0 867 221 178 98 chr20 6807753 6808213 -65345669 + MLT1F1 LTR MaLR 82 595 0 592 152 0 11 chr20 6808377 6808469 -65345413 + AluJb SINE Alu 209 299 -13 880 155 0 8 chr20 6808882 6809011 -65344871 - FLAM_A SINE Alu -5 128 1 874 265 76 64 chr20 6809048 6809164 -65344718 + L1ME3 LINE L1 4987 5100 -1062 2173 104 3 0 chr20 6809164 6809452 -65344430 - AluSp SINE Alu -24 289 1 874 265 76 64 chr20 6809452 6809662 -65344220 + L1ME3 LINE L1 5100 5306 -856 1053 185 0 0 chr20 6809662 6809819 -65344063 + FRAM SINE Alu 2 158 -8 874 265 76 64 chr20 6809819 6810135 -65343747 + L1ME3 LINE L1 5306 5657 -505 2262 79 0 0 chr20 6810135 6810415 -65343467 + AluSg SINE Alu 27 306 -4 874 265 76 64 chr20 6810415 6810597 -65343285 + L1ME3 LINE L1 5657 5835 -327 2284 83 7 0 chr20 6811726 6812015 -65341867 - AluSc SINE Alu -18 291 1 1292 139 93 9 chr20 6812363 6812579 -65341303 - MER46A DNA MER2_type 0 236 3 1604 148 112 11 chr20 6813413 6813690 -65340192 + AluSg1 SINE Alu 2 306 -3 2047 117 33 10 chr20 6814039 6814339 -65339543 + AluSc SINE Alu 1 307 -2 701 255 52 14 chr20 6815139 6815351 -65338531 - MIR SINE MIR -29 233 14 2509 64 0 0 chr20 6816333 6816629 -65337253 + AluY SINE Alu 1 296 -15 297 0 0 0 chr20 6816634 6816667 -65337215 + (CA)n Simple_repeat Simple_repeat 1 33 0 325 309 171 6 chr20 6816814 6816989 -65336893 + LTR50 LTR ERVL 16 219 -576 509 245 121 29 chr20 6817091 6817405 -65336477 + LTR33A LTR ERVL 307 507 -16 228 164 0 49 chr20 6818560 6818621 -65335261 + L1MC2 LINE L1 6276 6333 -11 2070 96 17 43 chr20 6820734 6821035 -65332847 - AluSx SINE Alu -19 293 1 752 143 0 9 chr20 6821422 6821534 -65332348 - AluJb SINE Alu -187 125 15 182 36 0 36 chr20 6821955 6821983 -65331899 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 659 200 0 0 chr20 6821985 6822100 -65331782 - AluSg/x SINE Alu -29 280 166 1291 164 24 0 chr20 6822125 6822332 -65331550 - AluJb SINE Alu -100 212 1 273 209 152 29 chr20 6822540 6822645 -65331237 - LTR33 LTR ERVL -38 483 366 422 293 117 46 chr20 6822851 6823090 -65330792 + MIR SINE MIR 1 256 -6 205 306 28 0 chr20 6823874 6823946 -65329936 + MIR SINE MIR 47 120 -88 378 328 66 8 chr20 6824026 6824270 -65329612 + MIR SINE MIR 5 262 0 26 0 0 0 chr20 6824312 6824338 -65329544 + AT_rich Low_complexity Low_complexity 1 26 0 893 272 192 17 chr20 6824445 6825155 -65328727 - L2 LINE L2 -14 3299 2453 27 73 0 0 chr20 6825993 6826048 -65327834 + AT_rich Low_complexity Low_complexity 1 55 0 1489 146 3 128 chr20 6829146 6829489 -65324393 + AluY SINE Alu 2 301 0 1017 245 111 58 chr20 6829792 6830224 -65323658 - LTR16B LTR ERVL 0 464 10 2432 84 3 6 chr20 6830593 6830904 -65322978 - AluSg SINE Alu 0 310 1 724 249 12 12 chr20 6831003 6831168 -65322714 + FRAM SINE Alu 1 165 -1 377 121 0 15 chr20 6831171 6831237 -65322645 + (GGGA)n Simple_repeat Simple_repeat 4 68 0 225 250 0 0 chr20 6832302 6832378 -65321504 + (CATATA)n Simple_repeat Simple_repeat 6 81 0 2175 110 10 0 chr20 6832869 6833170 -65320712 + AluSx SINE Alu 1 304 -8 574 207 32 48 chr20 6833599 6833787 -65320095 - MER5A DNA MER1_type -2 187 3 186 71 0 0 chr20 6834635 6834663 -65319219 + (T)n Simple_repeat Simple_repeat 1 28 0 183 80 0 0 chr20 6834973 6834998 -65318884 + (TTAAA)n Simple_repeat Simple_repeat 2 26 0 2117 117 7 7 chr20 6835007 6835306 -65318576 + AluSx SINE Alu 1 299 -13 1127 179 83 67 chr20 6835370 6835683 -65318199 + MER58B DNA MER1_type 24 341 0 803 236 51 4 chr20 6835818 6836055 -65317827 + L2 LINE L2 1932 2179 -1135 2010 180 42 102 chr20 6836055 6836380 -65317502 - LTR55 LTR ERV -5 543 267 1973 131 0 11 chr20 6836380 6836662 -65317220 - AluJb SINE Alu -8 304 26 2010 180 42 102 chr20 6836662 6836913 -65316969 - LTR55 LTR ERV -281 267 2 1999 245 120 7 chr20 6836914 6837701 -65316181 + L2 LINE L2 2178 3047 -266 2181 105 7 3 chr20 6837810 6838104 -65315778 - AluSq SINE Alu -18 295 1 1496 215 111 14 chr20 6838341 6838765 -65315117 - MLT1C LTR MaLR 0 467 3 210 37 0 0 chr20 6839133 6839160 -65314722 + (TG)n Simple_repeat Simple_repeat 1 27 0 1107 263 27 58 chr20 6839436 6839696 -65314186 - LTR16C LTR ERVL -2 489 245 1965 204 12 46 chr20 6839696 6840177 -65313705 + MLT1C LTR MaLR 1 465 -2